BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780171|ref|YP_003064584.1| ABC transporter membrane
spanning protein (amino acid) [Candidatus Liberibacter asiaticus str.
psy62]
         (398 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780171|ref|YP_003064584.1| ABC transporter membrane spanning protein (amino acid) [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039848|gb|ACT56644.1| ABC transporter membrane spanning protein (amino acid) [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 398

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/398 (100%), Positives = 398/398 (100%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG
Sbjct: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
           IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS
Sbjct: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT
Sbjct: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL
Sbjct: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA
Sbjct: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT
Sbjct: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK
Sbjct: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398


>gi|315122674|ref|YP_004063163.1| ABC transporter membrane spanning protein (amino acid) [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313496076|gb|ADR52675.1| ABC transporter membrane spanning protein (amino acid) [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 398

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 301/398 (75%), Positives = 347/398 (87%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M+KN +      F  MKFLYD+R+ +I +Q ++  ++T++ LW VNNV++NM KSNLSLG
Sbjct: 1   MMKNIKSMFNHNFCEMKFLYDVRIRSILIQAVILSIVTMVILWLVNNVHHNMVKSNLSLG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
           IGFL ERAGFEIDQGI+PYTSDSSYA AI+VGF NTF +AF+G+IPATIIG LVG GRLS
Sbjct: 61  IGFLKERAGFEIDQGIIPYTSDSSYAMAIVVGFSNTFMVAFAGIIPATIIGVLVGTGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           +NKLV+WICRVYVEVFRNIPPLVVIFF Y+SVLS+LPIP+HSI LP G+FLNNRG SFPT
Sbjct: 121 SNKLVSWICRVYVEVFRNIPPLVVIFFWYRSVLSILPIPEHSISLPLGIFLNNRGFSFPT 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L MD NAKI +FSFVLGI LS+F+ +LSR FH KTG+ LPL Y++  LI GLP LVL+AL
Sbjct: 181 LIMDINAKIVLFSFVLGIALSIFSAKLSRQFHMKTGQTLPLFYVAVLLILGLPMLVLLAL 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +QL+FDKPVLG+FNF GG T+ PEFMSLYIALSCYTA+FIAEI+R GLI+V RGQMEAA
Sbjct: 241 NFQLYFDKPVLGKFNFTGGCTIGPEFMSLYIALSCYTASFIAEIIRLGLISVSRGQMEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IALGLT  KATRLV+LPQAMR IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG+IINQT
Sbjct: 301 IALGLTPGKATRLVILPQAMRIIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGSIINQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           GQAIEIILIWMFIYLSLSIMI+LFMN LN K+ALKE++
Sbjct: 361 GQAIEIILIWMFIYLSLSIMISLFMNWLNTKVALKERR 398


>gi|222148881|ref|YP_002549838.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735867|gb|ACM36830.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 398

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/382 (53%), Positives = 281/382 (73%), Gaps = 2/382 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
             +YD +V  I  Q++  L++ V F+W V NN  +N++K+N++ G GFL  R+GF+I Q 
Sbjct: 18  SLIYDPKVRGIFYQVV-TLVILVAFIWMVANNTIHNLQKANITSGFGFLQGRSGFDIGQQ 76

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y+SDS+Y  A+LVG +NT  +A +G+I A+IIG  VG GRLS N L+A +C+VYVE+
Sbjct: 77  LISYSSDSTYGRALLVGLLNTLQVAAAGIITASIIGFAVGLGRLSHNWLIAKLCQVYVEI 136

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRNIPPL+VIFF Y+ V+++LP    SI LPF ++LNNRG++FP       A + + +  
Sbjct: 137 FRNIPPLLVIFFWYRGVIAILPQARDSIALPFDIYLNNRGITFPKAIFGDEAWLLLPAIA 196

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GIVLS+   + +R     TG+  P+L+ S  LI GLP LV +A+   L FD P++G+FN
Sbjct: 197 IGIVLSILLRKWARKRQMATGQQFPILWSSLALILGLPVLVFMAIGMPLTFDLPIVGRFN 256

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             GGS V PEF SL++ALS YTAAFIAEIVR G+ AV +GQ EAA ALGL H   +RL++
Sbjct: 257 MQGGSVVGPEFTSLFLALSFYTAAFIAEIVRGGIKAVSKGQTEAASALGLKHNHTSRLIV 316

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQAMR IIPPLTSQYLNL KNSSLAVA+GFAD+V+VGGTI+NQTGQA+EI+ +W+ +YL
Sbjct: 317 VPQAMRIIIPPLTSQYLNLAKNSSLAVAIGFADIVAVGGTILNQTGQAVEIVAVWLAVYL 376

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           ++SI  A+FMN  NAK+AL E+
Sbjct: 377 TISISTAVFMNWFNAKMALVER 398


>gi|325292971|ref|YP_004278835.1| General L-amino acid transport system permease protein aapQ
           [Agrobacterium sp. H13-3]
 gi|325060824|gb|ADY64515.1| General L-amino acid transport system permease protein aapQ
           [Agrobacterium sp. H13-3]
          Length = 398

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/389 (53%), Positives = 276/389 (70%), Gaps = 2/389 (0%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERA 68
           +R  S    +YD R+  I  Q++  ++LT  F+W  V N   N+++SN+S G GFL+ RA
Sbjct: 11  SRAQSASSLIYDPRIRGIFYQVLTVVILTA-FVWIIVTNTITNLQRSNISSGFGFLNGRA 69

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF+I Q ++ YTSD++Y  A+LVG +NT  +AF G+I A+IIG +VG  RLS N L++ +
Sbjct: 70  GFDIGQSLIAYTSDATYGRALLVGILNTIQVAFFGIIAASIIGFIVGIARLSNNWLISKL 129

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            + YVE+FRNIPPL+VIFF YK V+SVLP    S+ LP G +LNNRG  FP         
Sbjct: 130 AQAYVEIFRNIPPLLVIFFWYKGVISVLPQARDSLQLPLGTYLNNRGFFFPKPLWGEGTW 189

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +   +FV+ IV+S+F  R ++   E+TG+       +T LI GLP    +AL   L FD 
Sbjct: 190 LIPLAFVVAIVISVFIYRWAKARQERTGEQFRTGITATLLIIGLPAATFLALGSPLTFDY 249

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+ G+FN  GGS V+PEFMSL++ALS YTA+FIAEIVR G+ AV +GQ EAA ALGL   
Sbjct: 250 PIAGRFNLAGGSVVAPEFMSLFLALSFYTASFIAEIVRGGIKAVAKGQTEAAEALGLRAS 309

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
             TRL+++PQAMR IIPPLTSQYLNL KNSSLAVAVGFAD+VSVGGTI+NQTGQA+E++ 
Sbjct: 310 TTTRLIVVPQAMRIIIPPLTSQYLNLTKNSSLAVAVGFADIVSVGGTILNQTGQAVEVVA 369

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IW+ +YLSLSI+ A+ MN LNAK+AL E+
Sbjct: 370 IWLVLYLSLSILTAVVMNWLNAKMALVER 398


>gi|159184824|ref|NP_354576.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140109|gb|AAK87361.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 398

 Score =  401 bits (1031), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/389 (53%), Positives = 272/389 (69%), Gaps = 2/389 (0%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERA 68
           +R  S    +YD R+  I  Q++  ++LT  F+W  V N   N+++SN+S G GFL  RA
Sbjct: 11  SRAQSASSLIYDPRIRGIFYQVLTVVILTA-FVWVIVTNTITNLQRSNISSGFGFLDGRA 69

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF+I Q ++ YTSDS+Y  A++VG +NT  +AF G+I A+IIG +VG  RLS N L++ +
Sbjct: 70  GFDIGQSLIAYTSDSTYGRALIVGILNTIQVAFFGIIAASIIGFIVGIARLSNNWLISKL 129

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            + YVE+FRNIPPL+VIFF YK V+SVLP    S+ LP G +LNNRG  FP         
Sbjct: 130 AQAYVEIFRNIPPLLVIFFWYKGVISVLPQARDSLELPLGSYLNNRGFFFPKPLWGEGTW 189

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +   +F++ IV+S F  R ++   E+TG+       +  LI GLP    +AL   L FD 
Sbjct: 190 LIPLAFLVAIVISFFVYRWAKARQEQTGQQFRTGITAALLIIGLPAATFLALGSPLTFDY 249

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+ G+FN  GGS V+PEFMSL++ALS YTA+FIAEIVR G+ AV +GQ EAA ALGL   
Sbjct: 250 PIAGRFNLSGGSVVAPEFMSLFLALSFYTASFIAEIVRGGIKAVAKGQTEAADALGLRSS 309

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
             TRL+++PQAMR IIPPLTSQ+LNL KNSSLAVAVGFAD+VSVGGTI+NQTGQA+E++ 
Sbjct: 310 TTTRLIVVPQAMRIIIPPLTSQFLNLTKNSSLAVAVGFADIVSVGGTILNQTGQAVEVVA 369

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IW+ IYLSLS++ AL MN  NAK+AL E+
Sbjct: 370 IWLVIYLSLSLLTALVMNWFNAKMALVER 398


>gi|116251959|ref|YP_767797.1| general L-amino acid transport system permease [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|3182888|sp|Q52813|AAPQ_RHIL3 RecName: Full=General L-amino acid transport system permease
           protein AapQ
 gi|1154895|emb|CAA57934.1| general amino acid ABC type transporter [Rhizobium leguminosarum]
 gi|115256607|emb|CAK07695.1| General L-amino acid transport system permease [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 400

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/379 (55%), Positives = 267/379 (70%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           +YD +  +I  QI+  ++L     W  +N   N+ +SN + G GFL  RAGFEI Q ++ 
Sbjct: 22  MYDPKYRSIFYQILTIVILVGFVWWVAHNTAVNLARSNTASGFGFLRGRAGFEIGQSLIT 81

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++SDS+YA A+LVG +NT  +A +G+  ATIIG L+G GRLS N L+A +C VYVEVFRN
Sbjct: 82  FSSDSTYARALLVGILNTLLVAVTGIFTATIIGFLIGIGRLSRNWLIAKLCTVYVEVFRN 141

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+VIFF Y  VLSVLP P  S+ LPF M+LNNRGL+FP    DT       + V+ I
Sbjct: 142 IPPLLVIFFWYLGVLSVLPQPRESVGLPFSMYLNNRGLAFPKPIFDTGMIAVGIALVIAI 201

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V S+   R +      TG+    ++ +  LI GLP LV +   + L FD PV G+FN  G
Sbjct: 202 VASIIIARWAHKRQAATGQPFHTVWTAIALIVGLPLLVFVVSGFPLTFDVPVAGKFNLTG 261

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS V PEFMSL++ALS YTA+FIAEIVR G+  VP+GQ EAA ALGL     TRLV++PQ
Sbjct: 262 GSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVPKGQSEAAGALGLHPSSVTRLVVVPQ 321

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+NQ+GQAIEI+ IW  +YLSLS
Sbjct: 322 ALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTILNQSGQAIEIVCIWGIVYLSLS 381

Query: 379 IMIALFMNRLNAKIALKEK 397
           I+ +LFMN  NAK+AL E+
Sbjct: 382 ILTSLFMNWFNAKMALVER 400


>gi|241204487|ref|YP_002975583.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858377|gb|ACS56044.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 400

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/379 (53%), Positives = 266/379 (70%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           +YD +  +I  Q++  ++L     W  +N   N+ +SN + G GFL  RAGFEI Q ++ 
Sbjct: 22  MYDPKYRSIFFQVLTIVILVGFVWWVAHNTAVNLARSNTASGFGFLRGRAGFEIGQSLIG 81

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++SDS+YA A++VG +NT  +A +G+  ATIIG L+G GRLS N L+A +C VYVEVFRN
Sbjct: 82  FSSDSTYARALVVGILNTLLVAVTGIFTATIIGFLIGIGRLSRNWLIAKLCTVYVEVFRN 141

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+VIFF Y  VLSVLP P  S+ LPF M+LNNRGL+FP    +T       + ++ I
Sbjct: 142 IPPLLVIFFWYLGVLSVLPQPRESVALPFSMYLNNRGLAFPKPIFETGMIAVGIALLIAI 201

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V ++   R +      TG+    ++ +  LI GLP LV +   + L FD PV G+FN  G
Sbjct: 202 VATIIIARWAHKRQAATGQPFHTVWTAIALIVGLPLLVFVVSGFPLTFDVPVAGKFNLTG 261

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS V PEFMSL++ALS YTA+FIAEIVR G+  V +GQ EAA ALGL     TRLV++PQ
Sbjct: 262 GSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVAKGQSEAAGALGLHPSSVTRLVVVPQ 321

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+NQ+GQAIEI+ IW  +YLSLS
Sbjct: 322 ALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTILNQSGQAIEIVCIWGIVYLSLS 381

Query: 379 IMIALFMNRLNAKIALKEK 397
           I+ +LFMN  NAK+AL E+
Sbjct: 382 ILTSLFMNWFNAKMALVER 400


>gi|227821879|ref|YP_002825849.1| putative amino-acid ABC transporter membrane protein [Sinorhizobium
           fredii NGR234]
 gi|227340878|gb|ACP25096.1| putative amino-acid ABC transporter membrane protein [Sinorhizobium
           fredii NGR234]
          Length = 397

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/387 (51%), Positives = 275/387 (71%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R  S    + D +V  I  Q +  ++L V+  W V N   N++++N++ G GFL+ RAGF
Sbjct: 11  RSKSSGSIINDPQVRGIFYQAVTIIILAVLVYWIVQNTVENLQRANIASGYGFLNSRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ Q ++ +TSDSSY  A++VGFVNT  +A +G+I ATIIG +VG GRLS N ++A +  
Sbjct: 71  DVGQSLIAFTSDSSYGRALVVGFVNTLLVAVTGIITATIIGFIVGIGRLSHNWIIAKLSL 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVEVFRNIPPL+VIFF Y  VL++LP    ++ LP  ++++NRG++FP       ++  
Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLAILPQAREALALPLDIYVSNRGVAFPRAIFGEGSQYT 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ ++  V S+   R +R   E TG+ LP+L+I   L+ GLP +  +A    L FD P+
Sbjct: 191 LFALIIAAVASVVFARYARQRQEATGQRLPVLWIVLGLLIGLPLITFLATGAPLTFDIPI 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G+FN  GGS V PEF+SL++ALS YTAAFIAEIVR+G+  V +GQ EAA ALG+  R  
Sbjct: 251 AGKFNLTGGSVVGPEFISLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPRLT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           TRLV++PQAMR IIPPLTSQYLNL KNSSLAVAVG+ADLV+VGGTI+NQTGQAIE++ IW
Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAVGYADLVAVGGTILNQTGQAIEVVSIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +YLSLS+  +LFMN  NA++AL E+
Sbjct: 371 IIVYLSLSLATSLFMNWYNARMALVER 397


>gi|239831566|ref|ZP_04679895.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239823833|gb|EEQ95401.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 408

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/381 (50%), Positives = 263/381 (69%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD RV  I  Q+I+  ++     W V N   N++++N++ G GFLS RAGF+I Q +
Sbjct: 28  SLLYDPRVRGIFYQVIVFGVVIGAIYWIVGNTVTNLQRANIASGFGFLSGRAGFDISQTL 87

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y+SDS+Y  A LVG +NT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 88  IQYSSDSNYGRAFLVGLMNTLYVAALGVVTASIIGFLVGIGRLSRNWLIRKICTVYVEVF 147

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    SI LP G ++NNRG   P       A +   + ++
Sbjct: 148 RNIPPLLVIFFWYFGVLSVLPQARDSIALPLGTYMNNRGFFMPAPVWGEGAWLLPVALLI 207

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIV S+   R ++     TG+    + ++  LI GLP L LIA  + + FD P LG FN 
Sbjct: 208 GIVASIVIARWAKRRQMATGQPFHTIRVAAALIIGLPVLALIATGFPISFDLPKLGTFNL 267

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ V PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 268 TGGAQVKPEFLALFLALSFYTASFIAETVRAGVLGVNKGQTEAAYAVGLRPGQTMRLIIV 327

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQ++E++ IWM IYL 
Sbjct: 328 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQSVEVVAIWMVIYLG 387

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++ +  MN  NAK+AL E+
Sbjct: 388 ISLITSGLMNWFNAKMALVER 408


>gi|86357518|ref|YP_469410.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
 gi|86281620|gb|ABC90683.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 406

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/385 (52%), Positives = 265/385 (68%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD  V  I  Q++  +LL V   W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPTVRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A++VG +NT  +A +G+I ATIIG +VG GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALVVGLLNTILIAVTGIITATIIGFIVGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP         +   
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGTYLNNRGLSFPKPIFGETFWLVGV 201

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +FV+ I+  +   R +      TG+    ++ S  L+ GLP +  +     L FD P+ G
Sbjct: 202 AFVVAIIAVIATARWAHRRQAATGQPFHTIWASIGLLVGLPLITFLLAGAPLSFDYPIAG 261

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  VP+GQ EAA ALGL     TR
Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV++PQA+R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM 
Sbjct: 322 LVVIPQALRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           IYL LS++ +L MN  NAK+AL E+
Sbjct: 382 IYLGLSVVTSLLMNWFNAKMALVER 406


>gi|153009883|ref|YP_001371098.1| polar amino acid ABC transporter inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561771|gb|ABS15269.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 397

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/381 (49%), Positives = 262/381 (68%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R+  I  Q+I+   +     W V N   N++++N++ G  FL+ RAGF+I Q +
Sbjct: 17  SLLYDPRIRGIFYQVIVFGAVIGAIYWIVGNTITNLQRANIASGFAFLNGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G+I A+IIG LVG GRLS N L+  IC VYVE+F
Sbjct: 77  IQYNSDSNYGRAFLVGLVNTLYVAALGVITASIIGFLVGIGRLSRNWLIRKICTVYVEIF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  LP G +LNNRG   P+      A +   + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPQARDSFSLPLGTYLNNRGFFMPSPIWGEGAWLLPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIV S+   R ++     TG++   + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GIVASIIVARWAKRRQMATGQSFHTIRVSAALIIGLPILALIATGFPVSFDSPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVNKGQTEAAYAVGLRPGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQ++E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQSVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|13476742|ref|NP_108311.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14027503|dbj|BAB53772.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 395

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/394 (50%), Positives = 263/394 (66%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFS-RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           A + V R  S R  F+ D ++ ++  Q ++ ++L     W V NV +N+++ +++ G GF
Sbjct: 2   ASQEVLREESGRASFINDPKIRSLFFQTLVVIVLFGSVWWIVQNVIDNLQRLHIASGFGF 61

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L  RAGF+I    + YTSDS+Y  AI+VG +NT  +A +G+I ATIIG ++G GRLS N 
Sbjct: 62  LRGRAGFDISDTPIAYTSDSTYGRAIVVGLINTVIVAVAGIITATIIGFVIGIGRLSQNW 121

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  IC VYVEVFRNIPPL+VIFF Y  VL+VLP P  S  LPFG FLN RG  FP    
Sbjct: 122 LIQKICTVYVEVFRNIPPLLVIFFWYSGVLAVLPAPRDSYHLPFGSFLNQRGFYFPRPVW 181

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              + + V + ++GI ++ F  R +R     TG+  P+L+ S  LI GLP L  +   + 
Sbjct: 182 GEGSWLIVVALLVGIAMAWFVARTARQRQMATGQQFPVLWTSVALIVGLPLLAYVLSGFP 241

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L FD P    FN  GG  V PEF+SLY+ALSCYTAAFIAEIVR+G+  V +GQ EAA AL
Sbjct: 242 LSFDLPKQSTFNLTGGFQVKPEFLSLYLALSCYTAAFIAEIVRAGIRGVSKGQTEAAAAL 301

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL      RLV++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL +  GT++NQTGQA
Sbjct: 302 GLRSGSILRLVVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQA 361

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E +LI M  YL LS++ +  MN +NA++AL E+
Sbjct: 362 VEGVLIMMIAYLILSLVTSAVMNVVNARMALVER 395


>gi|260463340|ref|ZP_05811541.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259030930|gb|EEW32205.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 395

 Score =  378 bits (970), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/384 (50%), Positives = 259/384 (67%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           SR  F+ D +V ++  Q ++ ++L     W V NV +N+++ +++ G GFL  RAGF+I 
Sbjct: 12  SRASFVNDPKVRSLFFQTLVVIVLFGSVWWIVQNVIDNLQRLHIASGFGFLRGRAGFDIS 71

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
              + YTSDS+Y  AI+VG +NT  +A +G+I ATIIG ++G GRLS N L+  IC VYV
Sbjct: 72  DTPIAYTSDSTYGRAIVVGLINTIIVAVAGIITATIIGFVIGIGRLSQNWLIQKICTVYV 131

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRNIPPL+VIFF Y  VL+VLP P  S  LPFG FLN RG  FP       + + + +
Sbjct: 132 EIFRNIPPLLVIFFWYSGVLAVLPPPRDSYNLPFGSFLNQRGFYFPRPVWGDGSWLILVA 191

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            V+GI ++ F  R +R     TG+  P+L+ S  LI GLP L  +   + L FD P    
Sbjct: 192 LVVGIAMAWFVARKARQRQMATGQQFPVLWTSVALIVGLPLLAYVLSGFPLSFDLPKQST 251

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN  GG  V PEF+SLY+ALSCYTAAFIAEIVR+G+  V +GQ EAA ALGL      RL
Sbjct: 252 FNLTGGFQVKPEFLSLYLALSCYTAAFIAEIVRAGIRGVSKGQTEAAAALGLRSGSILRL 311

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL +  GT++NQTGQA+E +LI M  
Sbjct: 312 VVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQAVEGVLIMMIA 371

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL LS++ +  MN +NA++AL E+
Sbjct: 372 YLILSLVTSAVMNVVNARMALVER 395


>gi|209549161|ref|YP_002281078.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209534917|gb|ACI54852.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 400

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/379 (54%), Positives = 266/379 (70%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           +YD +  +I  QI+  ++L     W  +N   N+ +SN + G GFL  RAGFEI Q ++ 
Sbjct: 22  MYDPKYRSIFFQILTIVVLVAFVWWVAHNTAVNLARSNTASGFGFLRGRAGFEIGQSLIG 81

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+SDS+YA A+ VG +NT  +A +G++ ATIIG ++G GRLS N L+A +  VYVE+FRN
Sbjct: 82  YSSDSTYARALFVGILNTLLVAVTGIVTATIIGFIIGIGRLSRNWLIAKLSTVYVEIFRN 141

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+VIFF Y  VLSVLP P  S+ LPF MFLNNRGL+FP    +T       + ++ I
Sbjct: 142 IPPLLVIFFWYLGVLSVLPQPRESVGLPFSMFLNNRGLAFPKPIFETGMVAVGIALLIAI 201

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V ++   R +      TG+    ++ S  LI GLP LV +A  + L FD PV G+FN  G
Sbjct: 202 VAAIIMARWAHKRQAATGQPFHTVWASIALIVGLPLLVFVASGFPLTFDVPVAGKFNLTG 261

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS V PEFMSL++ALS YTA+FIAEIVR G+  VP+GQ EAA ALGL     TRLV++PQ
Sbjct: 262 GSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVPKGQSEAAGALGLHPSNVTRLVVVPQ 321

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+NQ+GQAIEI+ IW   YLSLS
Sbjct: 322 ALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTILNQSGQAIEIVCIWGIAYLSLS 381

Query: 379 IMIALFMNRLNAKIALKEK 397
           I+ +LFMN  NAK+AL E+
Sbjct: 382 ILTSLFMNWFNAKMALVER 400


>gi|190410095|ref|YP_001965619.1| probable general L-amino acid transport permease ABC transporter
           protein [Sinorhizobium meliloti]
 gi|125631125|gb|ABN47126.1| probable general L-amino acid transport permease ABC transporter
           protein [Sinorhizobium meliloti SM11]
          Length = 391

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/387 (52%), Positives = 272/387 (70%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G  FL  RAGF
Sbjct: 5   RSKSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFLRSRAGF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG LVG GRLS N ++A +  
Sbjct: 65  DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFLVGIGRLSHNWIIAKLSL 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP       A+  
Sbjct: 125 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPVAGEGAEYT 184

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +F++ I  S+F TR +R     TG+ LP+L+    LI GLP +  +     + FD PV
Sbjct: 185 LLAFIIAIAASVFCTRYARQRQLATGERLPVLWTVLGLIIGLPLITFLVTGAPIGFDVPV 244

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA ALG+     
Sbjct: 245 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPSLT 304

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IE++ IW
Sbjct: 305 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEVVSIW 364

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +YLSLS+  +LFMN  NA++AL E+
Sbjct: 365 LIVYLSLSLATSLFMNWYNARMALVER 391


>gi|319784339|ref|YP_004143815.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170227|gb|ADV13765.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 395

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/384 (50%), Positives = 256/384 (66%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           SR  F+ D ++  I  Q+++ +LL     W  +NV +N+ +  ++ G GFL  RAGF+I 
Sbjct: 12  SRGSFINDPKIRGIFFQVLVVVLLVAGVWWIAHNVIDNLTRLRIASGFGFLKGRAGFDIS 71

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +  + Y+SDS+Y  AILVG +NT  +A  G+I ATIIG ++G GRLS N L+  IC VYV
Sbjct: 72  ESAIAYSSDSTYGRAILVGLLNTVIVAIVGIITATIIGFVIGIGRLSKNWLIRKICTVYV 131

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EVFRNIPPL+VIFF Y  VL+VLP P  SI LPFG FLN RG  FP       + +   +
Sbjct: 132 EVFRNIPPLLVIFFWYSGVLAVLPAPRDSINLPFGSFLNQRGFYFPRAVWGDGSWLIFVA 191

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++GI ++ F  R +R     TG+  P+ + S  LI GLP L      + L FD P    
Sbjct: 192 LLVGIAMAWFVARKARQRQMATGQQFPVFWTSAALIVGLPLLAYALSGFPLSFDYPKQST 251

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN  GG  V PEF+SLY+ALSCYTAAFIAEIVR+G+  V  GQ EAA ALGL      RL
Sbjct: 252 FNLTGGFQVRPEFLSLYLALSCYTAAFIAEIVRAGIRGVSAGQTEAAGALGLRSGSILRL 311

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL +  GT++NQTGQA+E ++I M I
Sbjct: 312 VVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQAVEGVVIMMVI 371

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL++S++ +L MN  NAK+AL E+
Sbjct: 372 YLAISLLTSLVMNWFNAKMALVER 395


>gi|265999519|ref|ZP_05466765.2| polar amino acid ABC transporter [Brucella melitensis bv. 2 str.
           63/9]
 gi|263094478|gb|EEZ18300.1| polar amino acid ABC transporter [Brucella melitensis bv. 2 str.
           63/9]
          Length = 454

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/403 (47%), Positives = 265/403 (65%), Gaps = 8/403 (1%)

Query: 3   KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54
           +  RK +  YF   +         LYD+R   I  Q+++   +     W V N   N+++
Sbjct: 52  ERHRKHMASYFGTERRQGSGGTSLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           +N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LV
Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNR
Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP 
Sbjct: 232 GFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +
Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG
Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TI+NQTGQA+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 412 TILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|150378346|ref|YP_001314940.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150396326|ref|YP_001326793.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150027841|gb|ABR59958.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150032893|gb|ABR65007.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 397

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/387 (52%), Positives = 272/387 (70%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G  FL  RAGF
Sbjct: 11  RSKSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFLRSRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG LVG GRLS N ++A +  
Sbjct: 71  DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFLVGIGRLSHNWIIAKLSL 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP       A+  
Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPVAGEGAEYT 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +F++ I  S+F TR +R     TG+ LP+L+    LI GLP +  +     + FD PV
Sbjct: 191 LLAFIIAIAASVFFTRYARQRQLATGERLPVLWTVLGLIIGLPLITFLVTGAPIGFDVPV 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA ALG+     
Sbjct: 251 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPSLT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IE++ IW
Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEVVSIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +YLSLS+  +LFMN  NA++AL E+
Sbjct: 371 LIVYLSLSLATSLFMNWYNARMALVER 397


>gi|225852261|ref|YP_002732494.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis ATCC 23457]
 gi|225640626|gb|ACO00540.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
          Length = 397

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 258/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD+R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|148560133|ref|YP_001258724.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148371390|gb|ABQ61369.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
          Length = 454

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/403 (47%), Positives = 264/403 (65%), Gaps = 8/403 (1%)

Query: 3   KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54
           +  RK +  YF   +         LYD R   I  Q+++   +     W V N   N+++
Sbjct: 52  ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           +N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LV
Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNR
Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP 
Sbjct: 232 GFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +
Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG
Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TI+NQTGQA+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 412 TILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|260563784|ref|ZP_05834270.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|260153800|gb|EEW88892.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
          Length = 454

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/403 (47%), Positives = 264/403 (65%), Gaps = 8/403 (1%)

Query: 3   KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54
           +  RK +  YF   +         LYD R   I  Q+++   +     W V N   N+++
Sbjct: 52  ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           +N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LV
Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNR
Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP 
Sbjct: 232 GFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +
Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG
Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TI+NQTGQA+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 412 TILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|225627244|ref|ZP_03785281.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225617249|gb|EEH14294.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
          Length = 454

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/403 (47%), Positives = 264/403 (65%), Gaps = 8/403 (1%)

Query: 3   KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54
           +  RK +  YF   +         LYD R   I  Q+++   +     W V N   N+++
Sbjct: 52  ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           +N++ G GF+  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LV
Sbjct: 112 ANIASGFGFIYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNR
Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP 
Sbjct: 232 GFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +
Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG
Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TI+NQTGQA+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 412 TILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|326408765|gb|ADZ65830.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis M28]
 gi|326538483|gb|ADZ86698.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M5-90]
          Length = 397

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 257/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD+R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P       A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPLPVWGEGAWAVPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|254707030|ref|ZP_05168858.1| amino acid ABC transporter, permease protein [Brucella
           pinnipedialis M163/99/10]
 gi|254718862|ref|ZP_05180673.1| amino acid ABC transporter, permease protein [Brucella sp. 83/13]
 gi|256369176|ref|YP_003106684.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261314498|ref|ZP_05953695.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|265983847|ref|ZP_06096582.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306837635|ref|ZP_07470505.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|255999336|gb|ACU47735.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261303524|gb|EEY07021.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|264662439|gb|EEZ32700.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306407284|gb|EFM63493.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 397

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 257/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|306843689|ref|ZP_07476289.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306275999|gb|EFM57708.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
          Length = 397

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 257/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGWAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWTLPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|17987493|ref|NP_540127.1| general L-amino acid transport system permease protein aapQ
           [Brucella melitensis bv. 1 str. 16M]
 gi|256044432|ref|ZP_05447336.1| general L-amino acid transport system permease protein aapQ
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265990853|ref|ZP_06103410.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17983191|gb|AAL52391.1| general l-amino acid transport system permease protein aapq
           [Brucella melitensis bv. 1 str. 16M]
 gi|263001637|gb|EEZ14212.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 397

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 257/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|256113276|ref|ZP_05454144.1| general L-amino acid transport system permease protein aapQ
           [Brucella melitensis bv. 3 str. Ether]
 gi|265994689|ref|ZP_06107246.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|262765802|gb|EEZ11591.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
          Length = 397

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 257/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHAIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|294852107|ref|ZP_06792780.1| general L-amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|294820696|gb|EFG37695.1| general L-amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 454

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/403 (47%), Positives = 264/403 (65%), Gaps = 8/403 (1%)

Query: 3   KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54
           +  RK +  YF   +         LYD R   I  Q+++   +     W V N   N+++
Sbjct: 52  ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           +N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LV
Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNR
Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP 
Sbjct: 232 GFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPI 291

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +
Sbjct: 292 LALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSK 351

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGG
Sbjct: 352 GQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGG 411

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TI+NQTG+A+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 412 TILNQTGRAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|307316995|ref|ZP_07596436.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306897083|gb|EFN27828.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 397

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/387 (51%), Positives = 272/387 (70%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G  F+  RAGF
Sbjct: 11  RSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFVRSRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG +VG GRLS N ++A +  
Sbjct: 71  DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLSHNWIIAKLSL 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP    +  A+  
Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPIAEEGAEYT 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +FV+ +  S+F  R +R     TG+ LP+L+    LI GLP +  +     + FD PV
Sbjct: 191 LLAFVIAVAASVFFARYARQRQLATGERLPVLWTVLGLIIGLPLVTFLVTGAPITFDIPV 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA ALG+     
Sbjct: 251 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPALT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IEI+ IW
Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEIVSIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +YLSLS+  +LFMN  NA++AL E+
Sbjct: 371 LIVYLSLSLATSLFMNWYNARMALVER 397


>gi|256159475|ref|ZP_05457243.1| amino acid ABC transporter, permease protein [Brucella ceti
           M490/95/1]
 gi|256254761|ref|ZP_05460297.1| amino acid ABC transporter, permease protein [Brucella ceti B1/94]
 gi|260168487|ref|ZP_05755298.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261221940|ref|ZP_05936221.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261757955|ref|ZP_06001664.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|265997903|ref|ZP_06110460.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|260920524|gb|EEX87177.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261737939|gb|EEY25935.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|262552371|gb|EEZ08361.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
          Length = 397

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 257/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GF+  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFIYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|254713862|ref|ZP_05175673.1| amino acid ABC transporter, permease protein [Brucella ceti
           M644/93/1]
 gi|254717081|ref|ZP_05178892.1| amino acid ABC transporter, permease protein [Brucella ceti
           M13/05/1]
 gi|261218892|ref|ZP_05933173.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261321609|ref|ZP_05960806.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|260923981|gb|EEX90549.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261294299|gb|EEX97795.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
          Length = 397

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 257/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ D+V+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDVVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|15965230|ref|NP_385583.1| general L-amino acid transport permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|15074410|emb|CAC46056.1| Probable general L-amino acid transport permease ABC transporter
           [Sinorhizobium meliloti 1021]
          Length = 397

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/387 (51%), Positives = 272/387 (70%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G  F+  RAGF
Sbjct: 11  RSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFVRSRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG +VG GRLS N ++A +  
Sbjct: 71  DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLSHNWIIAKLSL 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP    +  A+  
Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPIAEEGAEYT 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +FV+ +  S+F  R +R     TG+ LP+L+    LI GLP +  +     + FD PV
Sbjct: 191 LLAFVIAVAASVFFARYARKRQLATGERLPVLWTVLGLIIGLPLVTFLVTGAPITFDIPV 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA ALG+     
Sbjct: 251 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPALT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IEI+ IW
Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEIVSIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +YLSLS+  +LFMN  NA++AL E+
Sbjct: 371 LIVYLSLSLATSLFMNWYNARMALVER 397


>gi|256060863|ref|ZP_05451023.1| amino acid ABC transporter, permease protein [Brucella neotomae
           5K33]
 gi|261324860|ref|ZP_05964057.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261300840|gb|EEY04337.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
          Length = 397

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 256/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   +  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGVFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQARRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|306842008|ref|ZP_07474681.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306287849|gb|EFM59269.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 397

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 256/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGLYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G+I A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVITASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S      ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVAHWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|163843015|ref|YP_001627419.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163673738|gb|ABY37849.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 397

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 256/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGIVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++ ++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLAPFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLMKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|254701520|ref|ZP_05163348.1| amino acid ABC transporter, permease protein [Brucella suis bv. 5
           str. 513]
 gi|261752068|ref|ZP_05995777.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261741821|gb|EEY29747.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 397

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 256/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LY  R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYGPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|307309253|ref|ZP_07588921.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306900254|gb|EFN30871.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 397

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/387 (51%), Positives = 271/387 (70%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G  F+  RAGF
Sbjct: 11  RSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFVRSRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG +VG GRLS N ++A +  
Sbjct: 71  DVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLSHNWIIAKLSL 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP    +  A+  
Sbjct: 131 AYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPIAEEGAEYT 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             +FV+ +  S+F  R +R     TG+ LP+L+    LI GLP +  +     + FD PV
Sbjct: 191 PLAFVIAVAASVFFARYARKRQLATGERLPVLWTVLGLIIGLPLVTFLVTGAPITFDIPV 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA ALG+     
Sbjct: 251 AGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPALT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IEI+ IW
Sbjct: 311 TRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEIVSIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +YLSLS+  +LFMN  NA++AL E+
Sbjct: 371 LIVYLSLSLATSLFMNWYNARMALVER 397


>gi|23501630|ref|NP_697757.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|161618713|ref|YP_001592600.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|254704069|ref|ZP_05165897.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|260566683|ref|ZP_05837153.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261754727|ref|ZP_05998436.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|23347547|gb|AAN29672.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|161335524|gb|ABX61829.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|260156201|gb|EEW91281.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261744480|gb|EEY32406.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
          Length = 397

 Score =  367 bits (942), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 186/381 (48%), Positives = 256/381 (67%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q +
Sbjct: 17  SLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  I  VYVEVF
Sbjct: 77  IQYNSDSTYGRAFLVGLVNTLYVAALGIVTASIIGFLVGIGRLSHNWLIRNISTVYVEVF 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++
Sbjct: 137 RNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWALPVALLI 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN 
Sbjct: 197 GILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNL 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++
Sbjct: 257 TGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIV 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM IYL 
Sbjct: 317 PQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMVIYLG 376

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++++  MN  NAK+AL E+
Sbjct: 377 ISLIVSGLMNWFNAKMALVER 397


>gi|222085839|ref|YP_002544370.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221723287|gb|ACM26443.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 396

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 186/379 (49%), Positives = 259/379 (68%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           +Y+ +V  +  Q++  ++L     + V N+ +N+  SN S G  FL+ RAGF + Q ++P
Sbjct: 18  IYNPKVRGLFYQVLTVIILVAAAWFIVQNIIDNLRASNQSFGFSFLTGRAGFNLGQALLP 77

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++SDS+   A++VG +NT  ++  G+I ATIIG L+G GRLS N L+A +C+ YVE+FRN
Sbjct: 78  FSSDSTNTQALIVGLLNTIVISICGIIAATIIGFLIGIGRLSKNWLIAKLCQAYVELFRN 137

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+VIFF Y  VL +LP    ++ LPF  +L+NRGL+FP+            + V+ I
Sbjct: 138 IPPLLVIFFWYSGVLVLLPQARDALHLPFSSYLSNRGLAFPSPIFGAGMWAVGAAIVIAI 197

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V   F  R +      TG+    +++S  LI GLP L  +     L FD PV G+FN  G
Sbjct: 198 VAVFFLARWAHRRQAATGQQFHTIWVSIALIVGLPLLTFLVSGRPLSFDYPVAGKFNLTG 257

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V PEF+SL++ALS YTA+FIAEIVR G+  V +GQ EAA ALGL     TRL+++PQ
Sbjct: 258 GFVVGPEFISLFLALSFYTASFIAEIVRGGIRGVAKGQSEAASALGLRSSAITRLIVIPQ 317

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R IIPPLTSQYLNL KNSSLA+A+G+ADLV+VGG I+NQ+G+AIE+++IWM +YL+LS
Sbjct: 318 ALRIIIPPLTSQYLNLTKNSSLAIAIGYADLVAVGGVILNQSGRAIEVVIIWMIVYLTLS 377

Query: 379 IMIALFMNRLNAKIALKEK 397
           I+ +LFMN  NAK+AL E+
Sbjct: 378 IVTSLFMNWFNAKMALVER 396


>gi|190891586|ref|YP_001978128.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696865|gb|ACE90950.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 406

 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 201/385 (52%), Positives = 265/385 (68%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD  +  I  Q++  +LL V   W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPTIRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A++VG +NT  +A +G+I ATIIG ++G GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALVVGLLNTLLIAVTGIITATIIGFIIGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP         +   
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPKPIFGDTFWLVGV 201

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + V+ IV ++   R +      TG+    ++ S  L+ GLP +  +     L FD P+ G
Sbjct: 202 ALVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVAGAPLSFDYPIAG 261

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  VP+GQ EAA ALGL     TR
Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM 
Sbjct: 322 LVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YLSLSI+ +L MN  NAK+AL E+
Sbjct: 382 VYLSLSIVTSLLMNWFNAKMALVER 406


>gi|327190791|gb|EGE57859.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 406

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 202/385 (52%), Positives = 266/385 (69%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD  +  I  Q++  +LL V   W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPTIRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A++VG +NT  +A +G+I ATIIG ++G GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALVVGLLNTILIAVTGIITATIIGFIIGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP         +   
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPKPIFGDTFWLVGV 201

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +FV+ IV ++   R +      TG+    ++ S  L+ GLP +  +     L FD P+ G
Sbjct: 202 AFVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVAGAPLSFDYPIAG 261

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  VP+GQ EAA ALGL     TR
Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM 
Sbjct: 322 LVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YLSLSI+ +L MN  NAK+AL E+
Sbjct: 382 VYLSLSIVTSLLMNWFNAKMALVER 406


>gi|110633467|ref|YP_673675.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110284451|gb|ABG62510.1| general L-amino acid ABC transporter membrane protein
           [Chelativorans sp. BNC1]
          Length = 396

 Score =  358 bits (919), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 182/384 (47%), Positives = 264/384 (68%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            R+  + + R   + +Q +L + +     W +NN  NN+ ++N++ G  FLS RAGF+I 
Sbjct: 13  ERIGLMRNPRTRGLIIQTVLIIAILAFAAWLINNTVNNLTRANIASGFDFLSARAGFDIG 72

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q  + Y+++SSY  A+LVG  NT  +A +G++ ATI+G ++G GRLS N LV  +  +YV
Sbjct: 73  QVPIAYSANSSYGRALLVGITNTVIVAGAGIVLATIVGFVIGIGRLSRNYLVRGLSTIYV 132

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E FRN+PPL+VI F Y  VLSVLP+P  ++ LPFG +L+NRGL  P    +  A   + +
Sbjct: 133 ETFRNVPPLLVILFWYFGVLSVLPLPREALELPFGAYLSNRGLQMPAARFEPLAVWTLAA 192

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F LGI  ++  +R ++    +TG+   +L+    LIFGLP +V +     + F+ P   +
Sbjct: 193 FALGIAAAVLLSRRNKLRQMRTGERQSILWPVLGLIFGLPLIVFVVTGLPVSFEAPQATR 252

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN +GG  + PEF+SL++ALS YTAAFIAEI+R+G++AV RGQ EAA ALGLT R++ RL
Sbjct: 253 FNLVGGWQIRPEFLSLFLALSFYTAAFIAEIIRAGILAVSRGQTEAASALGLTRRQSLRL 312

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQA R +IPPLTSQYLNL KNSSL +AVG+ +LV+VG T++NQTGQ++E++ IWM +
Sbjct: 313 VVVPQAFRVVIPPLTSQYLNLTKNSSLGLAVGYPELVAVGSTVLNQTGQSVEVVAIWMVV 372

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL LS+  A FMN  NA++AL E+
Sbjct: 373 YLGLSVATAAFMNWFNARVALVER 396


>gi|90419550|ref|ZP_01227460.1| amino acid ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336487|gb|EAS50228.1| amino acid ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 396

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 185/391 (47%), Positives = 256/391 (65%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
            +V R      FL +  V +I +Q+ L + L +   W V+N   N+  +N++ G GFL+E
Sbjct: 6   HSVPRQGGGASFLNNPTVRSIVIQVALVVGLALFTWWIVDNTARNLAAANIASGFGFLAE 65

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           RAGF+I      Y+S+++Y  AIL+G  NT  +A SG+I ATI+G LVG GRLS N LV 
Sbjct: 66  RAGFDIAITPFTYSSNATYGHAILIGIANTLVVAISGIILATIVGFLVGIGRLSRNFLVR 125

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            I  VYVE FRNIPPL+VI F Y  VLSVL  P      P G++L NRGL  P +  +  
Sbjct: 126 SISTVYVETFRNIPPLLVILFWYFGVLSVLSGPRGIDESPVGVYLTNRGLQIPAILFEPV 185

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   + +  +G   ++   R S+     TG+  P+L+ +  +I GLP LV +A       
Sbjct: 186 AWATLAALAVGTAATILYARRSKKHQMATGERRPVLWPAIGMIVGLPLLVFVATGIPATL 245

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P   +FN  GG  + PEF++L++ALS YTAAF+AEIVR+G+++V +GQ EAA ALGLT
Sbjct: 246 EFPTATRFNLAGGIQIRPEFIALWLALSIYTAAFVAEIVRAGILSVSKGQTEAASALGLT 305

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  RLV++PQA R IIPPLTSQYLNL KNSSL +A+G+ +LV+VG T++NQ+GQ+IE+
Sbjct: 306 RGKLLRLVVVPQAFRVIIPPLTSQYLNLTKNSSLGLAIGYPELVAVGSTVLNQSGQSIEV 365

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++IWM +YL LSI ++L MN  NAK+AL E+
Sbjct: 366 VVIWMTVYLGLSITVSLIMNWFNAKMALVER 396


>gi|114706425|ref|ZP_01439327.1| probable general l-amino acid transport permease abc transporter
           protein [Fulvimarina pelagi HTCC2506]
 gi|114538286|gb|EAU41408.1| probable general l-amino acid transport permease abc transporter
           protein [Fulvimarina pelagi HTCC2506]
          Length = 400

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 173/379 (45%), Positives = 246/379 (64%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D    + ++Q  L + L +   W V+N   N+ ++N++ G GFLS RAGF+I Q  + 
Sbjct: 22  LNDPFFRSFAIQATLIIGLALFVWWLVDNTARNLAQANIASGFGFLSNRAGFDIGQTPIE 81

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y++ ++Y  A++VG VNT  +A +G++ ATI+G ++G GRLS N LV  +  VYVEVFRN
Sbjct: 82  YSNSATYGRALIVGLVNTLIVAGTGIVFATIVGFIIGIGRLSQNFLVRLLSTVYVEVFRN 141

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+VI F Y  V+S L  P      PFG +L NRGL  P+   +  A      F  G+
Sbjct: 142 IPPLLVILFWYFGVISALGSPRGISENPFGFYLTNRGLQTPSFAFEVLAWASFVVFAAGL 201

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
             ++   R +R    KTG   P L+    L+ GLP +  +        D P  G FN  G
Sbjct: 202 AAAIVLARRNRRHQLKTGDRKPTLWPVLGLVVGLPLVAFLVTGMPATIDIPTPGTFNLQG 261

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PEF++L++ALS YTAAFIAEIVR+G+++V +GQ EA+ ALGL      RLV++PQ
Sbjct: 262 GFQIKPEFVALFLALSLYTAAFIAEIVRAGILSVSKGQTEASSALGLRRGLTLRLVIVPQ 321

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R IIPPLTSQYLNL+KNSSL +A+G+ +L ++G T++NQ+GQ+IEII+I M +YLS+S
Sbjct: 322 AFRVIIPPLTSQYLNLIKNSSLGLAIGYPELFAIGTTVLNQSGQSIEIIVICMGVYLSIS 381

Query: 379 IMIALFMNRLNAKIALKEK 397
           I +++FMN  N+K+AL E+
Sbjct: 382 IAVSIFMNWFNSKMALAER 400


>gi|163760314|ref|ZP_02167397.1| probable general l-amino acid transport permease abc transporter
           protein [Hoeflea phototrophica DFL-43]
 gi|162282713|gb|EDQ33001.1| probable general l-amino acid transport permease abc transporter
           protein [Hoeflea phototrophica DFL-43]
          Length = 402

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 170/390 (43%), Positives = 246/390 (63%), Gaps = 8/390 (2%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            R+  + D +V  +  Q +L + +  +    ++N  +N+ ++ +S G GF  ERAGF+I 
Sbjct: 15  GRVSMMNDPKVRGLVFQGLLIIAVGAMVWSGISNAVDNLARAGISSGFGFFGERAGFDIG 74

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q  +PYT+DS+Y  A  VG +NT  +A  G+  ATIIG +VG  RLS N LV     +YV
Sbjct: 75  QAFIPYTNDSTYLRAFFVGLLNTMVVAIIGIFLATIIGFVVGLARLSKNYLVQKFATIYV 134

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIP-----DHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           EV RNIP L+ + F YK+VLS+LP P     +    + F   +NNRGL  P L  +  + 
Sbjct: 135 EVLRNIPLLLQLLFWYKAVLSILPSPRAAGLEAGAEVAFN--INNRGLYIPRLVPEDGSS 192

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +  ++F + ++      R ++     TG+  P+      ++ GLP +  +     +  + 
Sbjct: 193 LIFYAFAIAVIAWFLIGRWAKKRQMATGQQFPVFLTGLAMVIGLPLVAFLVTGMPVSMEY 252

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L  FN +GG  + PEFM+L + LS YTAAFIAEIVR+G++AV RGQ EAA ALGL   
Sbjct: 253 ASLQGFNMVGGWVIQPEFMALLLGLSLYTAAFIAEIVRAGILAVSRGQTEAAFALGLRPN 312

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
             +RLV++PQAMR IIPPLTSQ+LNL KNSSLAVA+G+ DLVS+ GGT++NQTGQA+E+I
Sbjct: 313 LTSRLVIVPQAMRVIIPPLTSQFLNLTKNSSLAVAIGYPDLVSIFGGTVLNQTGQAVEVI 372

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I M +YL+LS++ + FMN  N+++AL E+
Sbjct: 373 SITMLVYLTLSLLTSAFMNWFNSRVALVER 402


>gi|209966386|ref|YP_002299301.1| general L-amino acid transport system permease protein AapQ
           [Rhodospirillum centenum SW]
 gi|209959852|gb|ACJ00489.1| general L-amino acid transport system permease protein AapQ
           [Rhodospirillum centenum SW]
          Length = 396

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 175/392 (44%), Positives = 244/392 (62%), Gaps = 2/392 (0%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
           R        R   L D  V  +  Q  +ALLL ++  + V+N   N+ +  ++ G GFL 
Sbjct: 7   RDAAAPPVRRRLSLNDPFVRAVLWQAGVALLLGLVAWYLVSNTMENLARQAVATGYGFLD 66

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
             AGF + +  +PY+   +Y  A LVG +NT  +A  G++ AT++G L+G  RLS N LV
Sbjct: 67  MPAGFHVGEAPIPYSPTDTYGRAFLVGILNTLKVAAIGIVLATVLGVLLGIARLSGNWLV 126

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
           A +   YVEV RN+P L+ +F  Y  +   LP P  ++    G+FL+NRGL  P      
Sbjct: 127 AKLSAGYVEVVRNVPLLLQLFLWYGLLTEALPGPRQALEPVPGVFLSNRGLKLPAPGEGG 186

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             ++ +++ + GI L++  +  +R     TG+ LP+  I T L+ GLP LVL+AL   L 
Sbjct: 187 GWELALYALLAGIALTVALSFWNRRRQAATGRRLPMGTIGTGLVAGLPALVLLALGAPL- 245

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D P L  FNF GG+T++PE  +L   L  YTAAFI EIVRSG++AVP+GQ EAA ALGL
Sbjct: 246 -DVPELRGFNFAGGATLTPELSALLFGLVAYTAAFIGEIVRSGILAVPQGQTEAARALGL 304

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +  RLV+LPQA+R I+PP TSQYLNL KNSSLAVA+G+ D VS+  T INQTGQA+E
Sbjct: 305 SGGQTMRLVVLPQALRVIVPPTTSQYLNLTKNSSLAVAIGYPDFVSIVNTTINQTGQALE 364

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   M +YL++SI ++L MN  NA+IALKE+
Sbjct: 365 GVAAVMAVYLTISIALSLLMNWYNARIALKER 396


>gi|126668364|ref|ZP_01739322.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17]
 gi|126627180|gb|EAZ97819.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17]
          Length = 396

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 171/367 (46%), Positives = 239/367 (65%), Gaps = 2/367 (0%)

Query: 33  LALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           LAL     F W + +N  +NME   +S G GFL E +GF I   ++PY S  +Y     V
Sbjct: 30  LALATVFWFGWTLFHNTLSNMESRGISTGFGFLDETSGFGIIMSLIPYDSTMTYGRTFFV 89

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +NT  ++  G++ ATIIG +VG  RLS+N L+A +  VY+E  RNIP L+ IFF Y +
Sbjct: 90  GLLNTLLVSAMGVVAATIIGFVVGVARLSSNWLIAKLALVYIETIRNIPLLLQIFFWYFA 149

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           VL  LP P  S+ +    FL+NRGL FPT + +      + + ++G+  ++F  R ++  
Sbjct: 150 VLQTLPSPRQSLDVADMFFLSNRGLYFPTASAEPGFGWVMAALIVGVAAAVFVHRWAKKR 209

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +TG+  P L +   LI  LP L+ + +   L ++ P L  FNF GG+++ PE  +L+I
Sbjct: 210 QFRTGQLFPALRVGAVLILALPLLMFVLVGRPLVWEMPSLTGFNFTGGASILPELAALWI 269

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS YTA+FIAEIVRSG++AV RGQ EAA ALGL      RLV++PQAMR IIPPLTSQY
Sbjct: 270 ALSLYTASFIAEIVRSGILAVNRGQTEAASALGLRSSFTLRLVVIPQAMRVIIPPLTSQY 329

Query: 332 LNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           LNL+KNSSLA A+ + DLVSV  GT +NQTGQA+E++ I M +YL++S++I+  MN  N 
Sbjct: 330 LNLVKNSSLATAIAYPDLVSVFMGTTLNQTGQAVEVVAITMAVYLTISLIISGLMNIYNR 389

Query: 391 KIALKEK 397
            +AL+E+
Sbjct: 390 AVALQER 396


>gi|83648449|ref|YP_436884.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83636492|gb|ABC32459.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 395

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 174/385 (45%), Positives = 241/385 (62%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           ++ K   D  V ++  Q++    +   FL+ +NN   NME+  ++ G  FL ++AGF I 
Sbjct: 11  AKTKIWNDPAVRSVFFQVLAVGAVVAFFLYIINNALTNMEQRGITTGFAFLGDQAGFGIL 70

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q ++ Y    S+     VG +NT  +A  G+I ATI+G  +G GRLS N L++ +   Y+
Sbjct: 71  QSLIEYDETHSFGRTFFVGLLNTVLVAVLGIILATILGFFIGIGRLSHNWLISKLATTYI 130

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E FRNIP L+ IFF Y +VL  LP P +S+ +   +F N RGL  P    +       F+
Sbjct: 131 ETFRNIPLLLQIFFWYFAVLQGLPSPRNSMSIGESVFFNIRGLYLPGPVYEDGFGAVAFA 190

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            V+ I + +   R  R    +TGK  PL   S  ++ GLP +V       +H+D PVL  
Sbjct: 191 IVVAIGIIIGLVRFERKRQRETGKTFPLFLPSVGILCGLPLIVYFLAGSPMHWDYPVLTG 250

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG T+ PE ++L IAL+ YTAAFIAE+VRSG+ A+PRGQ EAA ALGL++ +  RL
Sbjct: 251 FNFKGGLTIIPELIALLIALTVYTAAFIAEVVRSGIEAIPRGQSEAANALGLSNGQRLRL 310

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQAMR IIPP+T+QYLNL KNSSLA A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 311 VIIPQAMRVIIPPMTNQYLNLTKNSSLATAIGYPDLVSVFMGTTLNQTGQAIEIIFMTMA 370

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL LS+  +  MN  N++IAL E+
Sbjct: 371 VYLFLSLSTSALMNWYNSRIALVER 395


>gi|237807992|ref|YP_002892432.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500253|gb|ACQ92846.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 397

 Score =  309 bits (791), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 170/382 (44%), Positives = 243/382 (63%), Gaps = 1/382 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
           +++YD +V  I  Q I    +  +  + ++N  +NME   ++ G  FL  RA F I Q +
Sbjct: 16  RWIYDPKVRGIIFQSIAVACVAWMLFYFISNALHNMESRGIATGFSFLDNRASFGIAQSL 75

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y+ + +Y  A ++G +NT  ++  G+I AT+ G L+G  RLS N L++    VY+E F
Sbjct: 76  ISYSENDTYGRAFIIGLLNTLLVSGIGIIFATVFGFLIGIARLSNNWLLSRAAAVYIETF 135

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIP L+ IFF Y  VL  LP P  SI L    FLN RGL  P    ++       +F+L
Sbjct: 136 RNIPLLLQIFFWYFCVLRALPGPRDSINLLDAFFLNVRGLYVPAPVTESGFTAVTVAFIL 195

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            IV  +F  + +++    TG+  P+ + S  L+FGLP +V +     +H++ P L  FNF
Sbjct: 196 AIVACVFLKKWAKNRQNLTGQPFPVFFSSLGLLFGLPLVVFLIAGMPMHWELPALKGFNF 255

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG TV PE  S+ +AL+ +TAA IAEIVRSG++AV +GQ+EAA ALGL +    R +++
Sbjct: 256 RGGLTVIPELFSMVVALTIFTAASIAEIVRSGIMAVSKGQVEAADALGLKNGLTLRFIII 315

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQAMR IIPPLTSQYLNL+KNSSLA AVG+ DLVSV  G+ +NQTGQA+EII + M +YL
Sbjct: 316 PQAMRVIIPPLTSQYLNLVKNSSLATAVGYPDLVSVFMGSTLNQTGQAVEIIAMTMAVYL 375

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           ++S++ ++ MN  NAK AL E+
Sbjct: 376 TISLITSVLMNIYNAKKALVER 397


>gi|298291388|ref|YP_003693327.1| polar amino acid ABC transporter inner membrane protein [Starkeya
           novella DSM 506]
 gi|296927899|gb|ADH88708.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 398

 Score =  308 bits (790), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 173/382 (45%), Positives = 244/382 (63%), Gaps = 1/382 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
            F+ D +V +I +Q++  +L+ ++      N  +N+    ++ G GFL   AGF I Q +
Sbjct: 17  SFINDPKVRSIGLQLVALILVILLGWMFAENARDNLAAQKIATGFGFLDNTAGFGISQTL 76

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +PY+  S+Y  A LVG +NT  +A  G+  ATIIG LVG GRLS N +V  I   YVEV 
Sbjct: 77  IPYSETSTYGRAFLVGLLNTILVAVVGIFLATIIGFLVGIGRLSKNFVVRLISTTYVEVL 136

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN+PPL  I F Y +VLS +P P  SI +   +F++NRGL  P         + +++F  
Sbjct: 137 RNLPPLFQILFWYLAVLSAMPSPRQSISVFGEVFISNRGLIIPRPLFGEGTGLVLWAFGA 196

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            ++  +     +R   E+TG+  P+L++   ++  +P   +I   + + F++P L  FNF
Sbjct: 197 ALLAVILIGYWARGRREETGQRFPMLWVGLGILVLVPLAAMIYTGFPITFERPELKGFNF 256

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  V PEF++L +AL+ YTAAFIAE VRSG++AV  GQ EAA +LGL + +  RLV++
Sbjct: 257 AGGVRVIPEFVALTVALATYTAAFIAENVRSGIMAVSHGQTEAAHSLGLRNGQTLRLVVI 316

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQAMR IIPPLT+QYLNL KNSSLAV +G+ DLV+V  GT +NQTGQAIEII I M +YL
Sbjct: 317 PQAMRVIIPPLTNQYLNLTKNSSLAVGIGYPDLVAVFAGTSLNQTGQAIEIIAITMGVYL 376

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            LSI+ +L MN  N +IAL E+
Sbjct: 377 VLSILTSLIMNAYNKRIALVER 398


>gi|59712140|ref|YP_204916.1| amino-acid transporter permease [Vibrio fischeri ES114]
 gi|59480241|gb|AAW86028.1| predicted amino-acid transporter permease [Vibrio fischeri ES114]
          Length = 388

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 175/380 (46%), Positives = 241/380 (63%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           LY+     I  Q+I    L   F   VNN  +N+E   ++ G+GFL + AGF I   +V 
Sbjct: 9   LYNPTFRAILFQVIAVAALVFFFYTIVNNALSNLESRGIATGLGFLDQEAGFGIGLSLVE 68

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SY    +VG +NT  ++  G++ AT++G  +G  RLS+N LV+    VY+E FRN
Sbjct: 69  YDETYSYGRTFVVGLLNTALVSVLGILFATVLGFTIGIARLSSNWLVSRCAAVYIETFRN 128

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP+   +  + +   +F+  I
Sbjct: 129 IPLLLQIFFWYFAVLQALPSPRQSLSLGESVFLNVRGLFFPSPIFEEGSNLIGIAFIAAI 188

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  LF ++ +++    TG+  P+L  S   +FGLPTL        +  + P L  FNF G
Sbjct: 189 VFILFLSKWAKNKQRITGQQTPVLRYSLLALFGLPTLAYFISGMPISIEYPELKGFNFRG 248

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA+ALGL  ++  +LV++PQ
Sbjct: 249 GISIIPELAALVVALSVYTASFIAEIVRSGINAVSHGQTEAAMALGLPRKRTLKLVVIPQ 308

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           AMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+L
Sbjct: 309 AMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMAVYLTL 368

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S++ +  MN  N+K+AL E+
Sbjct: 369 SLLTSFLMNIYNSKVALVER 388


>gi|27365995|ref|NP_761523.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|320156510|ref|YP_004188889.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O]
 gi|27362195|gb|AAO11050.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus
           CMCP6]
 gi|319931822|gb|ADV86686.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 401

 Score =  305 bits (782), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 174/397 (43%), Positives = 244/397 (61%), Gaps = 2/397 (0%)

Query: 3   KNARKTVT-RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           KN    V+ +  S    LY+    ++  Q+I  L L   F   VNN   N+    ++ G 
Sbjct: 5   KNTSSGVSAKPSSSTNLLYNPTFRSVVFQVIAILALVFFFYTIVNNALTNLNARGIATGF 64

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FLS+ AGF I   ++ Y    SY    ++G +NT  ++F G+I AT++G ++G  RLS+
Sbjct: 65  DFLSQEAGFGIGLTLIEYDETFSYGRTFVIGLLNTALVSFLGIILATVLGFVIGIARLSS 124

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           N LV+    +Y+E+FRNIP L+ IFF Y +VL  LP P  SI L   +FLN RGL FP  
Sbjct: 125 NWLVSRFAAIYIEIFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAIFLNVRGLFFPKP 184

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
             +  +     +   GI+ ++F    +R+  + TG+  P+  I+  LI GLP LV     
Sbjct: 185 VFEAGSAFIFAALFAGIIATIFIGVWARNKQKLTGQQTPMGRIALALIVGLPALVYFVSG 244

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             +  + P L  FN+ GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA+
Sbjct: 245 MPVSAEYPALKGFNYQGGISIIPELAALLVALSIYTAAFIAEIVRSGINAVSHGQTEAAM 304

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360
           +LGL   +  +L+++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQT
Sbjct: 305 SLGLPRTRTLKLIIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQT 364

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 365 GQAIEIIAMTMGVYLTLSLVTSALMNIYNKKVALVER 401


>gi|37679740|ref|NP_934349.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37198485|dbj|BAC94320.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 401

 Score =  305 bits (781), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 174/397 (43%), Positives = 244/397 (61%), Gaps = 2/397 (0%)

Query: 3   KNARKTVT-RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           KN    V+ +  S    LY+    ++  Q+I  L L   F   VNN   N+    ++ G 
Sbjct: 5   KNTSSGVSAKPSSSTNLLYNPTFRSVVFQVIAILALVFFFYTIVNNALTNLNARGIATGF 64

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FLS+ AGF I   ++ Y    SY    ++G +NT  ++F G+I AT++G ++G  RLS+
Sbjct: 65  DFLSQEAGFGIGLTLIEYDETFSYGRTFVIGLLNTALVSFLGIILATVLGFVIGIARLSS 124

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           N LV+    +Y+E+FRNIP L+ IFF Y +VL  LP P  SI L   +FLN RGL FP  
Sbjct: 125 NWLVSRFAAIYIEIFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAIFLNVRGLFFPKP 184

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
             +  +     +   GI+ ++F    +R+  + TG+  P+  I+  LI GLP LV     
Sbjct: 185 IFEAGSAFIFAALFAGIIATIFIGVWARNKQKLTGQQTPMGRIALALIVGLPALVYFVSG 244

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             +  + P L  FN+ GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA+
Sbjct: 245 MPVSAEYPALKGFNYQGGISIIPELAALLVALSIYTAAFIAEIVRSGINAVSHGQTEAAM 304

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360
           +LGL   +  +L+++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQT
Sbjct: 305 SLGLPRTRTLKLIIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQT 364

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 365 GQAIEIIAMTMGVYLTLSLVTSALMNIYNKKVALVER 401


>gi|224367656|ref|YP_002601819.1| AapQ [Desulfobacterium autotrophicum HRM2]
 gi|223690372|gb|ACN13655.1| AapQ [Desulfobacterium autotrophicum HRM2]
          Length = 390

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 166/385 (43%), Positives = 242/385 (62%), Gaps = 2/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            ++ F  D    +I  Q +  + + ++  + V+N   N+E+ ++S G GF    A FEI 
Sbjct: 7   EKIPFFRDPEKLSILYQFLSIVAVGLVSYYLVSNTLANLERQSISTGFGFFEREASFEIG 66

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++ Y++  SY  A+ VGF+NT  ++F G+I   I+GT++G  RLS+N LV+ +  +Y+
Sbjct: 67  ESLIKYSAADSYGRALAVGFLNTLIVSFIGIILTVILGTILGIARLSSNWLVSRLSAIYI 126

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF-GMFLNNRGLSFPTLTMDTNAKIFVF 192
           EVF++IP L+ +FF Y     +LP P  ++  PF G+FL NRGL F         K    
Sbjct: 127 EVFQDIPILLQLFFWYAFFYEMLPSPRQALN-PFSGLFLCNRGLVFGIPEWHPAFKFMAA 185

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + VLGIV++L   R ++   E+TG+  P+L +S  LI GLP +V +        + P L 
Sbjct: 186 ALVLGIVIALVLKRWAKARQERTGQIFPILKVSALLIIGLPLVVWLMTGMPTRMNVPTLQ 245

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FNF GG ++SPEF +L + L  YTAAF+AE+VR+G+ +V +GQ EAA+++GL       
Sbjct: 246 GFNFKGGLSISPEFTALLLGLVLYTAAFVAEVVRAGIQSVSKGQTEAALSIGLKPTHVLN 305

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV+LPQA+R IIPPLTSQ LNL KNSSLAVA+G+ D VSV GT INQTGQAIE + + M 
Sbjct: 306 LVILPQALRVIIPPLTSQLLNLTKNSSLAVAIGYPDFVSVAGTTINQTGQAIEGVAMIMI 365

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL  S+  + FMN  N +IAL E+
Sbjct: 366 VYLVFSLSTSAFMNWYNKRIALVER 390


>gi|149376723|ref|ZP_01894481.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
 gi|149358962|gb|EDM47428.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
          Length = 395

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 175/385 (45%), Positives = 243/385 (63%), Gaps = 7/385 (1%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           K  YD RV  I  Q++ A+ L     W  ++N  +NME   +S G GFL E AGF I   
Sbjct: 14  KPWYDPRVRAIFFQVV-AIALVFWGGWVLIDNTLSNMESRGISTGFGFLDESAGFGIIMS 72

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +VPY +  SY     VG  NT  ++  G++ ATI+G ++G  RLS+N LVA +   Y+EV
Sbjct: 73  LVPYDATMSYGRTFWVGLTNTLLVSAMGVVTATILGFIIGVARLSSNWLVAKVSLAYIEV 132

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT-LTMDTNAKIFVFSF 194
            RNIP L+ IFF Y +VLS LP P  S+ +    FLNNRGL  P  +T D      V+  
Sbjct: 133 IRNIPLLLQIFFWYFAVLSSLPSPRQSVDVGGAFFLNNRGLYVPEPVTQDGFG--LVWGG 190

Query: 195 VLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           +L  + ++   R+ ++     TG   P   +   ++F +P +        L +D P L  
Sbjct: 191 ILAAIAAVIGIRIWAKRRQLATGAIFPTFKVGVGILFLVPIMSYFLAGQPLEWDLPALKG 250

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++ PE  +L+IALS YTA+FIAEIVRSG+++V +GQ EA+ ALGL +    RL
Sbjct: 251 FNFGGGISIIPELAALWIALSLYTASFIAEIVRSGILSVSKGQTEASKALGLPNGLTLRL 310

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQAMR IIPPLTSQYLNL+KNSSLA A+G+ DLV+V  GT +NQTGQA+E++ I M 
Sbjct: 311 VVIPQAMRVIIPPLTSQYLNLVKNSSLATAIGYPDLVAVFMGTTLNQTGQAVEVVAITMA 370

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL++S++I+LFMN  N  +A+KE+
Sbjct: 371 VYLTISLLISLFMNIYNRAVAIKER 395


>gi|307942365|ref|ZP_07657716.1| general L-amino acid transport system permease protein AapQ
           [Roseibium sp. TrichSKD4]
 gi|307774651|gb|EFO33861.1| general L-amino acid transport system permease protein AapQ
           [Roseibium sp. TrichSKD4]
          Length = 392

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 169/383 (44%), Positives = 234/383 (61%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           R   L D +V  +  Q++L   L     + V+N   N+E+ N+S G  FL   AGF I Q
Sbjct: 10  RASLLNDPKVRGLFYQVLLVAFLVAGGWFIVSNTAANLERQNISSGFDFLKNTAGFGISQ 69

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
             + Y+  SSY  AI++GF+NT  +A  G+  ATIIG +VG  RLS N +++ +   YVE
Sbjct: 70  TPIEYSETSSYGRAIVIGFLNTLLVAVFGIFFATIIGFVVGISRLSTNWVISKLAYWYVE 129

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           + RN+P L+ I F Y  ++   P P  S+ L  G  LNNRG   P       A   + + 
Sbjct: 130 IVRNVPLLLQILFWYLLLIESTPSPRKSVELGAGAVLNNRGFFLPKPIWGDVAVYSLAAL 189

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++GI+ +      +R   E TG+  P+   +   I G P LV +     + F+ PVL  F
Sbjct: 190 IIGIIATFVIRSWARKRQELTGQQFPVGLTALGAIIGFPLLVFLITGLPVQFEYPVLKGF 249

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N++GG  + PEF++L  ALS YTAAFIAEIVR+G+ AV  GQ EAA ALGL +    RLV
Sbjct: 250 NYVGGQRLIPEFLALLFALSIYTAAFIAEIVRAGIQAVSHGQTEAAHALGLRNSPTLRLV 309

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQAMR +IPP+TSQYLNL KNSSLAVA+ F DLV+ G  ++NQ+G+AIEI+ IWM +Y
Sbjct: 310 VIPQAMRVMIPPMTSQYLNLTKNSSLAVAIAFPDLVANGQIVMNQSGRAIEIVGIWMVVY 369

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           LSLS+  + FMN  N ++AL E+
Sbjct: 370 LSLSLGTSAFMNWYNKRMALVER 392


>gi|311695086|gb|ADP97959.1| amino acid ABC transporter, permease protein [marine bacterium
           HP15]
          Length = 395

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 175/394 (44%), Positives = 244/394 (61%), Gaps = 3/394 (0%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFL 64
           ++T+    +  K  YD RV ++  Q + A+ L     W  V+N  +NME   +S G GFL
Sbjct: 3   KQTIDTRPAGPKPWYDPRVRSLFFQAV-AIALVFWGGWILVDNTLSNMESRGISTGFGFL 61

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            E AGF I   +VPY +  SY     VG  NT  ++  G++ ATI+G ++G  RLS+N L
Sbjct: 62  GETAGFGIIMNLVPYDATMSYGRTFWVGLTNTLLVSAMGVVAATILGFIIGVARLSSNWL 121

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           VA +  VY+EV RNIP L+ IFF Y +VLS LP P  S+ +   +FLNNRGL  P     
Sbjct: 122 VAKMALVYIEVIRNIPLLLQIFFWYFAVLSNLPSPRQSVDVGGALFLNNRGLYLPDPVTQ 181

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I     +L I   +     ++     TG+  P   +   ++  +P +  +     L
Sbjct: 182 EGFGIVWGGILLAIAAVVGIRIWAKKRQLATGQIFPTFKVGVAILVLVPIISYLVAGRPL 241

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +D P L  FNF GG T+ PE  +L+IALS YTA+FIAEIVRSG+++V +GQ EA+ ALG
Sbjct: 242 EWDLPALRGFNFGGGITIIPELAALWIALSLYTASFIAEIVRSGILSVSKGQTEASKALG 301

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L +    RLV++PQAMR IIPPLTSQYLNL+KNSSLA A+G+ DLV+V  GT +NQTGQA
Sbjct: 302 LPNGLTLRLVVIPQAMRVIIPPLTSQYLNLVKNSSLATAIGYPDLVAVFMGTTLNQTGQA 361

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E++ I M +YL++S++I+LFMN  N  +A+KE+
Sbjct: 362 VEVVAITMAVYLTISLLISLFMNIYNRAVAIKER 395


>gi|323498374|ref|ZP_08103374.1| amino acid ABC transporter, permease protein [Vibrio sinaloensis
           DSM 21326]
 gi|323316616|gb|EGA69627.1| amino acid ABC transporter, permease protein [Vibrio sinaloensis
           DSM 21326]
          Length = 401

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 177/394 (44%), Positives = 244/394 (61%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A KT  R  S    +Y+    ++  Q I    L   F   VNN  +N+E   ++ G GFL
Sbjct: 8   ASKTDNRPSSGASLIYNPTFRSVVFQAIAICALFFFFYTIVNNALSNLEARGIATGFGFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            + AGF I   ++ Y    SY    LVG +NT  ++F G+I AT++G ++G  RLS N L
Sbjct: 68  DQEAGFGIGLTLIEYDETYSYGRTFLVGLLNTALVSFLGIILATVVGFVMGIARLSNNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ +  VY+E+FRN+P L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    +
Sbjct: 128 VSRLAAVYIEIFRNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVFE 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             + + + S VLGIV S+F    +R+    TG+  P+  I   L+  LP +V   +   +
Sbjct: 188 AGSGVVIASLVLGIVASVFVGVWARNKQRLTGQQTPMGRIIFGLVVALPVVVYFVMGSPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SAEYPELKGFNFRGGVSIIPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPKSRTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 368 IEIIAMTMAVYLTLSLVTSALMNIYNRKVALVER 401


>gi|163854808|ref|YP_001629106.1| putative amino acid ABC transporter permease protein [Bordetella
           petrii DSM 12804]
 gi|163258536|emb|CAP40835.1| putative amino acid ABC transporter permease protein [Bordetella
           petrii]
          Length = 396

 Score =  301 bits (772), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 166/353 (47%), Positives = 225/353 (63%), Gaps = 1/353 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V+N  +N++  N+S G GF+   AGF I +  + YT  ++Y  AI+VG +NT   A  G+
Sbjct: 45  VSNTLHNLQVRNISTGFGFIDREAGFAIGETPIDYTPANTYGRAIVVGLLNTLRAAVLGI 104

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           I AT++GTL+G GRLS N L+A +C VYVE  RN+P L+ +FF Y  +   +P P  +  
Sbjct: 105 ILATLLGTLIGVGRLSKNWLMAKVCSVYVETMRNVPLLLQLFFWYALITENMPGPRQAAN 164

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
              G+F++NRGL  P L    +    +    L I+ ++ A    +   E TG+  PL  +
Sbjct: 165 PLPGVFISNRGLKVPALE-GASLDFILGGLALAIIGTIVAAHWGKKRQEATGQVFPLGRV 223

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  L  GLP L  +     L  D P L  FNF GG T+SPEF +L   L  YT+AFIAE+
Sbjct: 224 ALGLFIGLPILGWLVSGASLKLDMPELKGFNFSGGLTLSPEFAALLAGLVIYTSAFIAEV 283

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ AV +GQ EAA +LGL   +  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+
Sbjct: 284 VRSGIQAVNQGQWEAAGSLGLRRSRVLRLVILPQALRVIIPPMTSQYLNLTKNSSLAVAI 343

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G+ D+VSV  T +NQTGQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 344 GYPDIVSVVNTTMNQTGQAIEGILIIMAAYLTVSLSISVFMNWYNKRIALVER 396


>gi|254503703|ref|ZP_05115854.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222439774|gb|EEE46453.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 401

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 173/392 (44%), Positives = 235/392 (59%), Gaps = 8/392 (2%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           +R   + D +V  +  Q +L   L     + V N   N+E+ N++ G GF+   AGF I 
Sbjct: 10  ARASLVNDPKVRGLFYQALLIAALIFFGYFIVTNTVANLERQNIASGWGFVENTAGFGII 69

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +VPY   SSY  AI VGF+NT  +A  G+  ATIIG +VG  RLS N ++  I   YV
Sbjct: 70  QSLVPYAETSSYGQAIFVGFLNTLMVAVVGIFFATIIGFVVGIARLSNNWVINQIAYCYV 129

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+ RN+P L+ IFF Y +VL  +P       L     LN  GL  P    +  +     +
Sbjct: 130 ELVRNVPLLLQIFFWYFAVLRAVPGKREKWSLFDTFHLNIAGLRMPKPIWEDGSGFIGIA 189

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++GIV S+  +R +R   ++TG+  P+ + +  LI GLP +        ++ + P   +
Sbjct: 190 LIIGIVASVVVSRWARKRQDETGQQFPVFWTALGLIIGLPVITYFVTGMPMYLEHPNYVE 249

Query: 254 --------FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                   F    G  + PEF++L  AL+ YTAAFIAEIVR+G+ AV  GQ EA+ ALGL
Sbjct: 250 TGPILRRGFELGVGFNLIPEFLALTTALAIYTAAFIAEIVRAGIQAVSHGQTEASHALGL 309

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +    RLV++PQAMR IIPPLTSQYLNL KNSSLAVA+ F DLVSVGGT++NQTGQAIE
Sbjct: 310 RNGPTLRLVVIPQAMRVIIPPLTSQYLNLTKNSSLAVAIAFPDLVSVGGTVLNQTGQAIE 369

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II IWM +YLSLS++ + FMN  N ++AL E+
Sbjct: 370 IIAIWMAVYLSLSLITSAFMNWYNQRMALVER 401


>gi|311109073|ref|YP_003981926.1| general L-amino acid transporter permease AapQ [Achromobacter
           xylosoxidans A8]
 gi|310763762|gb|ADP19211.1| general L-amino acid transport system permease protein AapQ
           [Achromobacter xylosoxidans A8]
          Length = 370

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 170/353 (48%), Positives = 226/353 (64%), Gaps = 1/353 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V+N  +N+   N++ G GFL   AGF I +  + Y+   +Y  AILVG +NT  +A  G+
Sbjct: 19  VSNTLHNLSVRNIATGFGFLQREAGFAIGETPIAYSPSDTYGHAILVGLLNTLRVAVIGI 78

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + ATI+GTL+G GRLS N LVA I  VYVEV RN+P L+ +FF Y  +   +P P  +  
Sbjct: 79  VLATILGTLIGIGRLSKNWLVAKITSVYVEVMRNVPLLLQLFFWYALITENMPGPRQAHN 138

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
              G+F++NRGL  P L  ++     +    L IV  +F     +   E TG+  PL   
Sbjct: 139 PLPGVFISNRGLKVPGLEGNS-LDWMLGGLGLAIVAIIFLGHWGKKRQEATGRVFPLGRA 197

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  L+ GLP +  +A    L  D PVL  FNF GG T+SPEF +L   L  YT+AFIAE+
Sbjct: 198 AIGLLIGLPIVGWLASGASLTLDMPVLKGFNFSGGLTLSPEFAALMAGLVVYTSAFIAEV 257

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ AV  GQ EAA +LGL  ++  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+
Sbjct: 258 VRSGIQAVNTGQWEAAGSLGLRRKQVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVAI 317

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G+ D+VSV  T +NQTGQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 318 GYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLSISIFMNWYNKRIALVER 370


>gi|328543625|ref|YP_004303734.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
 gi|326413369|gb|ADZ70432.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 395

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 172/393 (43%), Positives = 240/393 (61%), Gaps = 9/393 (2%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           +R   + D +V  +  Q++L  +L  +    V+N  +N+ + N++ G GFL   AGF I 
Sbjct: 3   ARASLVNDPKVRGLFYQVLLIAVLVFVGWSIVSNTIDNLARQNIASGFGFLGNTAGFGII 62

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +VPY   SSY  A++VGF NT  +A  G++ AT++G +VG  RLS N +++ +   YV
Sbjct: 63  QALVPYAETSSYGQALVVGFFNTLLVAVIGIVFATVLGFVVGIARLSNNWVISRLAYAYV 122

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVF 192
           E+ RNIP L+ IFF Y +VL  +P         F  + LN  GL  P   ++  +     
Sbjct: 123 ELIRNIPLLLQIFFWYFAVLRAVPDKRDRWSFLFDTVHLNIAGLWLPRPELEPGSSAVGV 182

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + ++G+  ++     +R   E TGK  P++  +  LI GLP +V +A    LH   PV  
Sbjct: 183 ALLVGVAAAIAMRIWARRRQEATGKQFPVILTALGLIVGLPLVVFLAAGMPLHLSHPVFV 242

Query: 253 Q--------FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +        F    G  + PE ++L +ALS YTA+FIAEIVR+G+ AV  GQ EAA ALG
Sbjct: 243 EEGPILRRGFTLGSGMNLIPELLALTLALSIYTASFIAEIVRAGIQAVSHGQTEAAHALG 302

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  RLV++PQAMR IIPPLTSQ+LNL KNSSLAVAV F DLVSVGG ++NQTGQAI
Sbjct: 303 LRNGQTLRLVVIPQAMRVIIPPLTSQFLNLTKNSSLAVAVAFPDLVSVGGIVLNQTGQAI 362

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           EII IWM +YLSLS+  + FMN  N ++AL E+
Sbjct: 363 EIIAIWMIVYLSLSLATSAFMNWYNRRMALVER 395


>gi|92112256|ref|YP_572184.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795346|gb|ABE57485.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 392

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 164/354 (46%), Positives = 228/354 (64%), Gaps = 1/354 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V N   N+E   ++ G GFL ERAGF I Q ++ ++ DS+Y    LVG +NT  ++  G+
Sbjct: 39  VGNTMANLEARGITTGFGFLDERAGFSIPQTLIEFSGDSTYGRTFLVGLLNTLLVSAMGI 98

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + ATIIG  VG  RLS N L+A +   YVE+FRNIP LV I F Y +VL  LP P  S+ 
Sbjct: 99  VAATIIGFAVGIARLSPNWLLARLAGAYVEIFRNIPLLVQILFWYFAVLQALPSPRDSLS 158

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L   +F+N RGL  P     +      ++ ++GIV ++     ++    +TG+ALP+ ++
Sbjct: 159 LMEVVFINVRGLVIPDPQPLSGFAATPWALLVGIVAAIALGIYAKRRQARTGQALPIYWL 218

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P  V +     L +  P L  FNF GG TV PE  +L++ALS YTA+FIAEI
Sbjct: 219 GAGLIIGTPLAVFLLTGAPLEWSIPELKGFNFSGGVTVIPELAALWLALSIYTASFIAEI 278

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+++VP GQ+EA+ AL L      R V++PQAMR I+P LTSQYLNL+KNSSLA A+
Sbjct: 279 VRSGILSVPSGQVEASRALSLPEAITLRKVVIPQAMRVIVPQLTSQYLNLIKNSSLATAI 338

Query: 345 GFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G+ DLV+V  GT +NQTGQAIEI+ + M +YL++S++++  MN  NA+  LKE+
Sbjct: 339 GYPDLVAVFAGTTLNQTGQAIEIVAMTMAVYLTISLIVSALMNMYNARTLLKER 392


>gi|90410649|ref|ZP_01218665.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90328890|gb|EAS45174.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 403

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 169/384 (44%), Positives = 232/384 (60%), Gaps = 1/384 (0%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           +    Y+     I  Q+I  L L   F   +NN   N++   ++ G GFL++ AGF I  
Sbjct: 20  KQNLFYNPTFRAIVFQLIAVLGLLFFFYNIINNALENLDARGIATGFGFLNQEAGFGIGL 79

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++ Y    +Y     VG +NT  ++  G+  ATIIG  VG  RLS+N L++    +Y+E
Sbjct: 80  TLIDYDETYTYGRTFFVGLLNTALVSVLGIFLATIIGFTVGIARLSSNWLISRFAALYIE 139

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FRNIP L+ IFF Y +VL  LP P  S+ +   +F+N RGL       +  +     +F
Sbjct: 140 TFRNIPLLLQIFFWYFAVLQALPSPRQSLSIGESLFINVRGLYLAGPVFNEGSGWIFAAF 199

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            L +VLS+     S    + TG+  P+L  +  ++ GLP +   A    +  + P L  F
Sbjct: 200 ALAVVLSIIYAIRSHKKQQDTGEQSPILLTTIGMVIGLPLIAFFAAGMPISVEYPELKGF 259

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           NF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EA++ALGL   K  RLV
Sbjct: 260 NFRGGISILPELAALLVALSIYTASFIAEIVRSGINAVNHGQTEASLALGLPRSKTLRLV 319

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFI 373
           ++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +
Sbjct: 320 VIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGV 379

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YLSLS++ + FMN  N K+AL E+
Sbjct: 380 YLSLSLITSFFMNMYNKKVALVER 403


>gi|317404417|gb|EFV84834.1| amino acid ABC transporter permease [Achromobacter xylosoxidans
           C54]
          Length = 396

 Score =  298 bits (763), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 173/377 (45%), Positives = 231/377 (61%), Gaps = 1/377 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D  V  +  Q+I    + +   + V+N  +N+   N++ G GFL   AGF I +  + YT
Sbjct: 21  DPGVRAVVYQVIALAAVALAVWFLVSNTLHNLSVRNIATGFGFLQREAGFAIGETPIAYT 80

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y  AI VG +NT  +A  G++ ATI+GTL+G GRLS N LVA I  VYVEV RN+P
Sbjct: 81  PADTYGRAIWVGLLNTLRVAVLGIVLATILGTLIGVGRLSKNWLVAKITSVYVEVMRNVP 140

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+ +FF Y  +   +P P  +     G+F++NRGL  P L  ++     +    L IV 
Sbjct: 141 LLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGLKVPALEGNS-LDWMLAGLGLAIVA 199

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            LF     +   E TG   PL   +  L+ GLP +  +     L  D P L  FNF GG 
Sbjct: 200 ILFLGHWGKKRQEATGHVFPLGRAAVGLLIGLPIVGWLVSGASLTLDMPELKGFNFSGGL 259

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+SPEF +L   L  YT+AFIAE+VRSG+ AV  GQ EAA ALGL  ++  RLV+LPQA+
Sbjct: 260 TLSPEFAALLAGLVIYTSAFIAEVVRSGIQAVNNGQWEAAGALGLRRKQVLRLVVLPQAL 319

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R IIPP+TSQ+LNL KNSSLAVA+G+ D+VSV  T +NQTGQAIE ILI M  YL++S+ 
Sbjct: 320 RVIIPPMTSQFLNLTKNSSLAVAIGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLS 379

Query: 381 IALFMNRLNAKIALKEK 397
           I++FMN  N +IAL E+
Sbjct: 380 ISIFMNWYNKRIALVER 396


>gi|327479739|gb|AEA83049.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas stutzeri DSM 4166]
          Length = 394

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 168/385 (43%), Positives = 242/385 (62%), Gaps = 3/385 (0%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEID 73
           R   L D RV     Q+I A+L  V F W + +N  NN+    ++ G GFL+  AGF I 
Sbjct: 11  RRSLLTDPRVRAWVFQVI-AVLAVVAFGWYLFHNTQNNLAHRGITSGFGFLNNAAGFGIS 69

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q ++ Y+   SY     VG +NT  ++  G++ ATI+G ++G GRLS+N L+  +  +Y+
Sbjct: 70  QHLIDYSESDSYGRVFWVGLLNTLLVSVIGIVLATIMGFILGVGRLSSNWLIRQLATLYI 129

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRNIPPL++IFF+Y +V+S LP P +S+ L   +F+NNRG+  P  +       F  +
Sbjct: 130 EIFRNIPPLLLIFFVYFAVISPLPGPRNSLSLWDAVFVNNRGVQMPAPSAADGFWAFWLA 189

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++ +V  +   R +R     TG+  P+ + S  L   +P LV +       ++ P L +
Sbjct: 190 LLVALVAVVMLHRWARARRHATGRMFPVFWTSLGLFIAIPWLVTLVAGAPFSWEVPELQR 249

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN  GG  V PE +S+ +ALS YTAAFI E VRSG+ +V  GQ EAA +LGL   +  RL
Sbjct: 250 FNIRGGWVVIPELVSIVVALSVYTAAFIGETVRSGIQSVSHGQTEAAASLGLRPGQVLRL 309

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQA+R I+PPLTSQYLNL KNSSLA A+G+ D+VS+  GT++NQTGQAIE + I M 
Sbjct: 310 VIVPQALRVIVPPLTSQYLNLAKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETMAITMS 369

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL++SI I+L MN  N +IAL E+
Sbjct: 370 VYLAISISISLLMNWYNKRIALIER 394


>gi|197334738|ref|YP_002156346.1| general L-amino acid transport system permease protein AapQ [Vibrio
           fischeri MJ11]
 gi|197316228|gb|ACH65675.1| general L-amino acid transport system permease protein AapQ [Vibrio
           fischeri MJ11]
          Length = 388

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 173/380 (45%), Positives = 239/380 (62%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           LY+     I  Q+I    L   F   VNN  +N+E   ++ G+GFL + AGF I   +V 
Sbjct: 9   LYNPTFRAILFQVIAVAALVFFFYTIVNNALSNLESRGIATGLGFLDQEAGFGIGLSLVE 68

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SY    +VG +NT  ++  G++ AT+ G  +G  RLS+N LV+    VY+E FRN
Sbjct: 69  YDETYSYGRTFVVGLLNTALVSVLGILFATVFGFTIGIARLSSNWLVSRCAAVYIETFRN 128

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP+   +  + +   + +  I
Sbjct: 129 IPLLLQIFFWYFAVLQALPSPRQSLSLGESVFLNVRGLFFPSPIFEEGSNLIGIAVIAAI 188

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  LF ++ +++    TG+  P+L  S   +FGLPTL        +  + P L  FNF G
Sbjct: 189 IFILFLSKWAKNKQRLTGQQTPVLRYSLLALFGLPTLAYFISGMPISIEYPELKGFNFRG 248

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA+ALGL  ++  +LV++PQ
Sbjct: 249 GISIIPELAALVVALSVYTASFIAEIVRSGINAVSHGQTEAAMALGLPRKRTLKLVVIPQ 308

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           AMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+L
Sbjct: 309 AMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMAVYLTL 368

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S++ +  MN  N+K+AL E+
Sbjct: 369 SLLTSFLMNIYNSKVALVER 388


>gi|319778956|ref|YP_004129869.1| Glutamate Aspartate transport system permease protein GltJ
           [Taylorella equigenitalis MCE9]
 gi|317108980|gb|ADU91726.1| Glutamate Aspartate transport system permease protein GltJ
           [Taylorella equigenitalis MCE9]
          Length = 385

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 161/384 (41%), Positives = 244/384 (63%), Gaps = 2/384 (0%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLW-CVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           + +F +D       V  IL L L V  +W  ++N+ +N+   N+  G  F+ + AGF I 
Sbjct: 3   KFRFSWDDERFRAIVYQILVLALVVAGIWFLISNLLDNLHSRNIQTGFAFIDKEAGFAIS 62

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++ Y    +Y  A+ VGF+NT +++F G+I  TI+GTLVG GRLS N LV+ +  VYV
Sbjct: 63  ESLIEYKLTDTYLRALAVGFLNTLFVSFLGIIGCTILGTLVGIGRLSHNWLVSKLSLVYV 122

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV RNIP L+ +FF Y  +  +LP P  ++    G++L+NRG+ FP L  D    I++ +
Sbjct: 123 EVMRNIPLLIHLFFWYSLLTEILPGPRQALNPVEGVYLSNRGIMFPKLEGDGVIYIWI-A 181

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            V  +VLS+  +   +  H K+GK  P+ + +T +I GLP LV +    Q+    P L  
Sbjct: 182 LVAALVLSILNSYRCKLKHAKSGKCSPVFWTNTLMIIGLPILVGLIFNSQIGLSVPELKG 241

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GGS  +PE  +L I L  YT+AF+AEIVRSG+ +V +GQ EA  +LGL+  +  +L
Sbjct: 242 FNFRGGSLFTPEMSALLIGLVLYTSAFVAEIVRSGIQSVGKGQWEAGESLGLSKMRTLQL 301

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQA+R +IP +++ Y+NL+KNSSLAVA+G+ D+VS+  T++ QTGQAIE I + M  
Sbjct: 302 VVMPQAIRVMIPSMSNTYMNLMKNSSLAVAIGYPDIVSISNTMLTQTGQAIEAIFVIMMA 361

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL++S+ IA FM  LN ++ + E+
Sbjct: 362 YLTVSLCIAQFMAWLNRRMVIVER 385


>gi|312881586|ref|ZP_07741364.1| amino acid ABC transporter, permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309370649|gb|EFP98123.1| amino acid ABC transporter, permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 400

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 170/385 (44%), Positives = 242/385 (62%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S+    Y+    ++  QI+    L   F   VNN  +N+E   ++ G  FLS+ AGF I 
Sbjct: 16  SKTNIFYNPTFRSVVFQILAVAGLAFFFYTIVNNALSNLEARGIATGFDFLSQEAGFGIG 75

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ Y    SY    +VG +NT  ++F G+I ATI+G ++G  RLS N LV+    VY+
Sbjct: 76  LTLIEYDETYSYGRTFIVGLLNTALVSFFGIILATIVGFIMGIARLSTNWLVSRFAAVYI 135

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRN+P L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    +T A I + S
Sbjct: 136 EIFRNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPIFETGASIVIGS 195

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FV+GI++++  +  +++  + TG+  P+  I+      +P +    +   +  + P L  
Sbjct: 196 FVVGIIVTILVSVWAKNKQQLTGQQTPMGKITLLFCVVIPVVCYFVMGSPISAEMPELRG 255

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++ PE  +L IALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   +  +L
Sbjct: 256 FNFEGGISIIPELAALLIALSIYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRSRTLKL 315

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 316 VVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMG 375

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +  MN  N K+AL E+
Sbjct: 376 VYLTLSLLTSALMNIYNRKVALVER 400


>gi|54309364|ref|YP_130384.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
 gi|46913800|emb|CAG20582.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 403

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 171/384 (44%), Positives = 229/384 (59%), Gaps = 1/384 (0%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           +    Y+     I  QII  L L   F   +NN   N++   ++ G GFL+E AGF I  
Sbjct: 20  KQNLFYNPTFRAIIFQIIAVLGLLFFFYNIINNALENLDARGIATGFGFLNEEAGFGIGL 79

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++ Y    +Y     VG +NT  ++  G+  ATIIG  VG  RLS+N L++     Y+E
Sbjct: 80  TLIDYDETYTYGRTFFVGLLNTALVSVLGIFLATIIGFTVGIARLSSNWLISRFAAFYIE 139

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +FRNIP L+ IFF Y +VL  LP P  S+ +    F+N RGL       +  +     + 
Sbjct: 140 IFRNIPLLLQIFFWYFAVLQALPSPRQSLSIGESFFINVRGLYLAGPVFNEGSGWIFAAL 199

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            L IVLS+     S    + TG+  P+L  +  ++ GLP +   A    +  + P L  F
Sbjct: 200 ALAIVLSIIYAIRSHKKQQDTGEQSPVLLTTIGMVIGLPLIAFFAAGMPVSIEYPELKGF 259

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           NF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EA++ALGL   K  RLV
Sbjct: 260 NFRGGISILPELAALLVALSIYTASFIAEIVRSGINAVNHGQTEASLALGLPRSKTLRLV 319

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFI 373
           ++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +
Sbjct: 320 VIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGV 379

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YLSLS+  + FMN  N K+AL E+
Sbjct: 380 YLSLSLTTSFFMNMYNKKVALVER 403


>gi|307546908|ref|YP_003899387.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307218932|emb|CBV44202.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 392

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 166/354 (46%), Positives = 228/354 (64%), Gaps = 1/354 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V N   N+E   ++ G GFL ERAGF I Q ++ Y+ DSSYA   +VG +NT  ++  G+
Sbjct: 39  VTNTLANLEARGITTGFGFLQERAGFSIPQTLIDYSGDSSYARTFVVGLLNTLLVSGMGI 98

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + ATIIG  VG  RLS+N L+A +   YVE+FRNIP LV I F Y +VL  LP P  S+ 
Sbjct: 99  VAATIIGFAVGISRLSSNWLLAKLAAAYVEIFRNIPLLVQILFWYFAVLQALPSPRQSLS 158

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L    FLN RGL  P           +++ +L ++L +  +  +R    +TGK LP+  +
Sbjct: 159 LFEAFFLNVRGLVVPAPDPLPGFSATLWALLLAVILVVVLSVYARRRQSRTGKPLPVFRL 218

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ GLP  V +     L ++ P L  FNF GG TV PE ++L++ALS YTA+FIAEI
Sbjct: 219 GALILIGLPLAVFLVTGRPLAWEVPALTGFNFKGGVTVIPELVALWLALSIYTASFIAEI 278

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ +VP+GQ+EAA A+ L      R +++PQAMR I+P LTSQYLNL KNSSLA A+
Sbjct: 279 VRSGIQSVPQGQVEAARAISLPGDVTLRKIVIPQAMRVIVPQLTSQYLNLTKNSSLATAI 338

Query: 345 GFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G+ DLV+V  GT +NQTGQAIEI+ I M +YL +S++++  MN  NA+  LKE+
Sbjct: 339 GYPDLVAVFAGTALNQTGQAIEIVAITMAVYLLISLVVSALMNLYNARTLLKER 392


>gi|293602098|ref|ZP_06684551.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
 gi|292819500|gb|EFF78528.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
          Length = 404

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 178/395 (45%), Positives = 241/395 (61%), Gaps = 4/395 (1%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           KNA  +  R   R+ +  D  V ++  Q++    +     + V+N  +N+   N++ G G
Sbjct: 14  KNAPISAPR--RRLNW-NDPGVRSVVYQVLALAAVAWAVWFLVSNTLHNLSVRNIATGFG 70

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FLS  AGF I +  + Y+  + Y  AILVG +NT  +A  G++ ATI+GTL+G GRLS N
Sbjct: 71  FLSREAGFAIGETPIAYSPANDYGRAILVGLLNTLRVAVIGIVLATILGTLIGIGRLSKN 130

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            LVA I  VYVEV RN+P L+ +FF Y  +   +P P  +     G+F++NRGL  P L 
Sbjct: 131 WLVAKITSVYVEVMRNVPLLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGLKVPGLE 190

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++     +    L IV  ++     +  HE TG   PL   +  L+ GLP +  +    
Sbjct: 191 GNS-LDWMLAGLGLAIVAIIYLGHYGKKRHEATGHMFPLGRWAIALLIGLPFVGWLVSGA 249

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L  D P L  FNF GG T+SPEF +L   L  YT+AFIAE+VRSG+ AV  GQ EAA +
Sbjct: 250 SLTLDMPELKGFNFSGGLTLSPEFAALLAGLVIYTSAFIAEVVRSGIQAVNNGQWEAAGS 309

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   K  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+G+ D+VSV  T +NQTGQ
Sbjct: 310 LGLPRAKVLRLVILPQALRVIIPPMTSQYLNLTKNSSLAVAIGYPDIVSVVNTTLNQTGQ 369

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 370 AIEGILIIMGAYLTVSLSISIFMNWYNKRIALVER 404


>gi|158423210|ref|YP_001524502.1| amino acid ABC transporter permease protein precursor [Azorhizobium
           caulinodans ORS 571]
 gi|158330099|dbj|BAF87584.1| amino acid ABC transporter permease protein precursor [Azorhizobium
           caulinodans ORS 571]
          Length = 429

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 178/411 (43%), Positives = 239/411 (58%), Gaps = 34/411 (8%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D +V ++ +Q++L L L  +    + N   N+ +  ++ G GFL   AGF I Q ++PY 
Sbjct: 19  DPKVRSLVLQVLLGLFLIWMAWSIIANAQANLARQGIASGFGFLDNSAGFGITQTLIPYG 78

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              SY  A LVG +NT  +A  G+I +TIIG L+G  RLS N ++  +   YVE+ RN+P
Sbjct: 79  ESDSYGRAFLVGLLNTLLVAVLGIILSTIIGFLMGVARLSNNVVIKGLSTAYVEITRNLP 138

Query: 141 PLVVIFFLYKSVLSVLPIPDHSI---------------------------------VLPF 167
           PL  I F Y +VL+ LP P  SI                                 V   
Sbjct: 139 PLFQIMFWYIAVLAALPGPRQSIGFGLQPLLNVLGDGLNAVGLASVGTSLKALAGGVSAP 198

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G+FLNNRGL  P       A+   ++FV+ +VL     R ++   E TG+  P+ + S  
Sbjct: 199 GVFLNNRGLVIPRAIFGEGAQFVFWAFVVALVLVFVLGRWAKRRREATGQQFPVFWTSLA 258

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ GLP L   AL + + F+KP L  FNF GG  V PE +SL +ALS YTA FIAE VRS
Sbjct: 259 LLIGLPFLTGAALGFPVTFEKPELRGFNFAGGVRVIPELVSLLLALSIYTAGFIAETVRS 318

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++AV +GQ EAA +LGL      RLV++PQAMR IIP LTSQYLNL KNS+L VAVG+ 
Sbjct: 319 GILAVSKGQTEAAHSLGLKGGLTMRLVVIPQAMRVIIPQLTSQYLNLTKNSTLGVAVGYP 378

Query: 348 DLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           DL SV  GT +NQTGQAIEII I M +YL++S++  L M+  N ++AL E+
Sbjct: 379 DLFSVFAGTTLNQTGQAIEIIAITMAVYLTISVVTTLIMDWYNRRVALIER 429


>gi|262274330|ref|ZP_06052141.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP
           101886]
 gi|262220893|gb|EEY72207.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP
           101886]
          Length = 402

 Score =  294 bits (753), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 174/385 (45%), Positives = 241/385 (62%), Gaps = 3/385 (0%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           +   +Y+    ++  Q I A++  V F++  VNN   N++   ++ G GFL++ AGF I 
Sbjct: 19  KQSIIYNPTFRSVIFQAI-AIIALVFFVYTIVNNALANLDSRGIATGFGFLTQEAGFGIG 77

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ Y    SY     VG +NT  ++  G+I ATIIG L+G  RLS+N LV+    VY+
Sbjct: 78  LTLIEYNETYSYDRTFFVGLLNTALVSVLGIIFATIIGFLMGIARLSSNWLVSRFAAVYI 137

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E FRNIP L+ IFF Y +VL  LP P  SI +   +F+N RGL       +  + +   +
Sbjct: 138 ETFRNIPLLLQIFFWYFAVLQALPSPRESISVGDSLFINVRGLYMTRPVFEEGSNLIFIA 197

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F + +V S   +R ++   E TG+  P+  +S   I GLP +        +  + P L  
Sbjct: 198 FAVSLVFSFVFSRWAKRKQEATGEQTPVFIVSLAAIIGLPLIAFFVAGMPVSLEYPELKG 257

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA+ALGL+  K  RL
Sbjct: 258 FNFRGGISIIPELAALVLALSIYTASFIAEIVRSGINAVSHGQTEAAMALGLSRSKTLRL 317

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 318 VVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMG 377

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +L MN  NAK+AL E+
Sbjct: 378 VYLTLSLLTSLVMNIYNAKMALVER 402


>gi|126731768|ref|ZP_01747572.1| putative amino acid ABC transporter permease protein [Sagittula
           stellata E-37]
 gi|126707595|gb|EBA06657.1| putative amino acid ABC transporter permease protein [Sagittula
           stellata E-37]
          Length = 399

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 161/379 (42%), Positives = 241/379 (63%), Gaps = 1/379 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           +Y      I+ Q+++A+ + +  L+  NNV  N+   +++ G GFL + A F+I +  +P
Sbjct: 22  IYSKTFRTIATQVVMAVFVVMAGLFLYNNVVENLRAQSIATGFGFLEQDAQFDIGETPIP 81

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +  +YA A LVG +NT  ++ +G++ ATI+G  VG  R+S+N L++ +   YVE+ RN
Sbjct: 82  FNATDTYARAFLVGLLNTLRVSAAGILLATILGFSVGFARVSSNWLLSKVATGYVEIVRN 141

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP ++ + F +  VL  LP    +I      FLNNRGLSF     D      +F+   GI
Sbjct: 142 IPVILQVIF-WAVVLRNLPAARDAIDFGGFAFLNNRGLSFAVPATDPVHGPMIFACFAGI 200

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL++    L+R   E TG+ + +L+ S  LIFGLP +V +          P L  FNF G
Sbjct: 201 VLAILGGYLARRHRENTGRYISMLWPSIGLIFGLPAIVWLLGGAPTALSVPALKGFNFRG 260

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+SPEF +L I ++ Y + FIAEIVR+GL A PRGQ+EAA ++GL  R   R V+LPQ
Sbjct: 261 GVTISPEFTALLIGIALYASGFIAEIVRAGLQATPRGQIEAARSIGLRPRFVMRFVVLPQ 320

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R I+PPLTSQY++L+KNSS+AV VG+ DLV++G T +NQTGQA+E I + M +YL++S
Sbjct: 321 ALRVIVPPLTSQYVSLIKNSSIAVVVGYPDLVNIGNTAMNQTGQAVEAIAVMMLVYLTVS 380

Query: 379 IMIALFMNRLNAKIALKEK 397
           ++ + FMN  N  +A+KE+
Sbjct: 381 LVTSTFMNVYNRLVAIKER 399


>gi|91227964|ref|ZP_01262074.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269968794|ref|ZP_06182783.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|91188285|gb|EAS74583.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269826606|gb|EEZ80951.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 401

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 172/392 (43%), Positives = 241/392 (61%), Gaps = 1/392 (0%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
            T+++       +Y+    +   QII    L   F   VNN  NN++   ++ G GFL++
Sbjct: 10  STMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIVNNALNNLDARGIATGFGFLNQ 69

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF I   ++ Y    SY    ++G +NT  ++  G+I AT+IG  +G  RLS+N LV+
Sbjct: 70  EAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIGFTMGVARLSSNWLVS 129

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP  TM+  
Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSLSLGEAIFLNVRGLYFPAPTMEPG 189

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +   + + + G++ SL     + +    TG+  P+  I   L+ GLP +V       +  
Sbjct: 190 SSYVIAALIFGVIASLLINVWANNKQRLTGQQTPMGRIVLGLVVGLPLVVYFLAGMPISL 249

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL 
Sbjct: 250 NYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
             K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE
Sbjct: 310 RSKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 370 IIAMTMGVYLTLSLITSALMNLYNRKVALVER 401


>gi|89073071|ref|ZP_01159618.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89051289|gb|EAR56745.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 399

 Score =  293 bits (751), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 181/385 (47%), Positives = 245/385 (63%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S+    Y+     +  Q+I  + L   F   VNN   N+E   +S G  FLS+ AGF I 
Sbjct: 15  SKQNIFYNPTFRAVIFQLIAVIGLVFFFYSIVNNALTNLESRGISTGFDFLSQEAGFGIG 74

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ Y    SY    +VG +NT  +A  G+I ATIIG ++G  RLS+N L++ +  VY+
Sbjct: 75  LKLIDYDETYSYGRTFVVGLLNTALVAVLGIILATIIGFIMGIARLSSNWLISRLAAVYI 134

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EVFRNIP L+ IFF Y +VL  LP P  SI L   +FLN RGLS P+    + ++I  + 
Sbjct: 135 EVFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAVFLNIRGLSIPSPIYGSGSEIVGWC 194

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             + +V+SLF  R ++   ++TG+ LP+L   T L+ GLP +        +  + P L  
Sbjct: 195 LAIAVVISLFFYRYAKKKQQQTGQQLPVLLTVTGLVLGLPLIAFFITGMPIDLEYPELKG 254

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG T+ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA ALGL+  K  RL
Sbjct: 255 FNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEALGLSRNKTLRL 314

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DL+SV  GT +NQTGQAIEII + M 
Sbjct: 315 VVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLISVFAGTTLNQTGQAIEIIAMTMA 374

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +L MN  N K+AL E+
Sbjct: 375 VYLTLSLLTSLVMNIYNKKVALVER 399


>gi|296533468|ref|ZP_06896048.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
 gi|296266203|gb|EFH12248.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
          Length = 400

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 167/377 (44%), Positives = 238/377 (63%), Gaps = 1/377 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R+ +I  Q+++  ++  I  W V N  +N+E   ++ G GFL   AG  + + ++PY+
Sbjct: 25  DERLRSIVWQVLVLGVVIAIIAWLVGNTQHNLEVRRIATGFGFLEREAGLPVAESLIPYS 84

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +YA A++VG +NT  +A  G++ AT+ GTL+G  RLS N L++ I   YVEV R++P
Sbjct: 85  PTDTYARALMVGVLNTLKIAVVGVVLATLFGTLLGIARLSKNWLLSRIAAAYVEVVRDLP 144

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+ + F Y ++L  LP P  ++    G+FL+NRGL  P +         +  FV GIVL
Sbjct: 145 LLLQLLFWY-AILQGLPGPRQALHPMEGVFLSNRGLKLPWIQWQDAHSFALLGFVAGIVL 203

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           ++F  R +R      G+   +   +  LI GLP  +   L      D P L  FNF GG 
Sbjct: 204 TVFYARAARARQMADGQPRRVWPAALGLIIGLPLAIWAGLGAPWTGDIPALRGFNFQGGL 263

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T++PE+ +L I L  YTAAFIAEIVR+G++AV +GQ EAA ALGL      R ++LPQA+
Sbjct: 264 TITPEYFALLIGLVMYTAAFIAEIVRAGILAVAKGQWEAAEALGLPRGLIMRKIVLPQAL 323

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R I+PP+TSQYLNL KNSSLAVA+G+ D+VS+  T +NQTGQAIE I I M +YL++S+ 
Sbjct: 324 RVIVPPMTSQYLNLTKNSSLAVAIGYQDIVSIANTTLNQTGQAIEGIAIIMAVYLTISLS 383

Query: 381 IALFMNRLNAKIALKEK 397
           I+LFMN  NA+IAL E+
Sbjct: 384 ISLFMNWYNARIALVER 400


>gi|218514141|ref|ZP_03510981.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 277

 Score =  293 bits (750), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 155/276 (56%), Positives = 194/276 (70%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           N L+A +C VYVEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP  
Sbjct: 2   NWLIAKLCTVYVEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPKP 61

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
                  +   + V+ IV ++   R +      TG+    ++ S  L+ GLP +  +   
Sbjct: 62  IFGDTFWLVGVALVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVAG 121

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L FD P+ G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  VP+GQ EAA 
Sbjct: 122 APLSFDYPIAGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAG 181

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL     TRLV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTG
Sbjct: 182 ALGLHPSSITRLVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTG 241

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QA+E+ILIWM +YLSLSI+ +L MN  NAK+AL E+
Sbjct: 242 QAVEVILIWMVVYLSLSIVTSLLMNWFNAKMALVER 277


>gi|163800831|ref|ZP_02194731.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175180|gb|EDP59977.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 401

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 174/392 (44%), Positives = 239/392 (60%), Gaps = 1/392 (0%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
            T+++       LY+    +   Q I    L   F   VNN  +N+E   ++ G GFL++
Sbjct: 10  STMSKPRRSENLLYNPAFRSAFFQFIAVAALVFFFYTIVNNALSNLEARGIATGFGFLNQ 69

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF I   ++ Y    SY    +VG +NT  +A  G+I ATIIG ++G  RLS+N LV+
Sbjct: 70  EAGFGIGLTLIEYDETFSYGRTFIVGLLNTALVAVLGIILATIIGFIMGIARLSSNWLVS 129

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ +   +FLN RGL FP    +  
Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSIGEAVFLNVRGLYFPAPIWEAG 189

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + + + +F+ GIV S      +R+    TG+  P++ I   L+  LP  V       +  
Sbjct: 190 SSVVIAAFIFGIVASFLIYIWARNKQRLTGQQTPMVRIVFGLVIVLPLAVYFIAGMPISL 249

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL 
Sbjct: 250 QYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
             K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE
Sbjct: 310 RTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 370 IIAMTMGVYLALSLITSALMNLYNRKVALVER 401


>gi|330504739|ref|YP_004381608.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328919025|gb|AEB59856.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 375

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 166/369 (44%), Positives = 231/369 (62%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  + +  +  +   N   N+EK  +  G  FL+  AGF I Q ++ YT  +SY    
Sbjct: 7   QIIAVVAVVALGWFLFQNTQANLEKRGIISGFAFLNNSAGFGIAQHLIDYTESNSYGRVF 66

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++F G++ A+I+G ++G  RLS N L++ +  VY+E+FRNIPPL+ I F Y
Sbjct: 67  VVGLLNTLLVSFIGIVLASILGFVLGVARLSPNWLISKLATVYIEIFRNIPPLLQILFWY 126

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +V   LP P  S+ +    FLN+RGL  P  +   +  +F    +  IV  +   R ++
Sbjct: 127 FAVFLALPGPRQSLDVGETFFLNSRGLYMPAPSPSESFGLFAVVLLATIVGIVALGRWAK 186

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
              E TGK  PLL+ S  LI  +P L  +     LH+  P L  FNF GG  + PE M+L
Sbjct: 187 KRREATGKIFPLLWTSLALIVVIPGLTALVAGNPLHWSVPELTGFNFRGGWVMIPELMAL 246

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL+ YTAAFIAE VRSG++AV  GQ EAA +LGL      RLV++PQA+R IIPPLTS
Sbjct: 247 TLALTIYTAAFIAENVRSGIMAVSHGQTEAARSLGLRPGITLRLVIIPQALRVIIPPLTS 306

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLNL KNSSLA  +G+ D+VS+  GT++NQTGQAIE++ I M +YL++SI I+L MN  
Sbjct: 307 QYLNLAKNSSLAAGIGYPDMVSLFAGTVLNQTGQAIEVMAITMSVYLAISISISLLMNWY 366

Query: 389 NAKIALKEK 397
           N +IAL E+
Sbjct: 367 NKRIALTER 375


>gi|254230450|ref|ZP_04923828.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262394187|ref|YP_003286041.1| amino acid ABC transporter permease [Vibrio sp. Ex25]
 gi|151937021|gb|EDN55901.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262337781|gb|ACY51576.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 401

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 170/392 (43%), Positives = 241/392 (61%), Gaps = 1/392 (0%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
            T+++       +Y+    +   QII    L   F   +NN  NN++   ++ G GFL++
Sbjct: 10  STMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIINNALNNLDARGIATGFGFLNQ 69

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF I   ++ Y    SY    ++G +NT  ++  G+I AT+IG  +G  RLS+N LV+
Sbjct: 70  EAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIGFTMGVARLSSNWLVS 129

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP   M+  
Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSLSLGEAIFLNVRGLYFPAPEMEPG 189

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +   + + + G++ SL     + +    TG+  P+  I+  L+ GLP +V       +  
Sbjct: 190 SGFVIAALIFGVIASLLINVWANNKQRLTGQQTPMGRIALGLVVGLPLIVYFLAGMPISL 249

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL 
Sbjct: 250 NYPELKGFNFQGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
             K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE
Sbjct: 310 RAKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 370 IIAMTMGVYLTLSLITSALMNLYNRKVALVER 401


>gi|269964208|ref|ZP_06178499.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269831057|gb|EEZ85225.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 401

 Score =  292 bits (748), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 168/392 (42%), Positives = 241/392 (61%), Gaps = 1/392 (0%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
            T+++       +Y+    +   QII    L   F   +NN   N++   ++ G GFL++
Sbjct: 10  STMSKPSGSKSLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLDARGIATGFGFLNQ 69

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF I   ++ Y    SY    +VG +NT  ++  G+I AT+IG ++G  RLS+N LV+
Sbjct: 70  EAGFGIGLTLIEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWLVS 129

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP   M+  
Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVMEAG 189

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + + + + + G++ ++     + +    TG+  P+  I+  L+ GLP +V       +  
Sbjct: 190 SGLVIAALIFGVIATVLINVWANNKQRLTGQQTPMGRIALGLVVGLPLVVYFLAGMPISL 249

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL 
Sbjct: 250 QYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
             K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE
Sbjct: 310 RTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 370 IIAMTMGVYLTLSLITSALMNLYNRKVALVER 401


>gi|33594684|ref|NP_882328.1| putative amino acid ABC transporter permease protein [Bordetella
           pertussis Tohama I]
 gi|33603421|ref|NP_890981.1| putative amino acid ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
 gi|33564760|emb|CAE44085.1| putative amino acid ABC transporter permease protein [Bordetella
           pertussis Tohama I]
 gi|33577545|emb|CAE34810.1| putative amino acid ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
          Length = 396

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 165/354 (46%), Positives = 226/354 (63%), Gaps = 3/354 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V+N  +N+   N++ G GFL   AGF I +  + Y+   +Y  AILVG +NT  +A  G+
Sbjct: 45  VSNTLHNLSVRNIATGFGFLDREAGFAIGETPIAYSPSDTYGRAILVGVLNTLRVAVIGI 104

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + AT++GTL+G GRLS N LVA +  +YVEV RN+P L+ +FF Y  +   +P P  +  
Sbjct: 105 VLATLLGTLIGIGRLSKNWLVARLTSIYVEVMRNVPLLLQLFFWYALITENMPGPRQAHN 164

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              G+F++NRG+  P+L  + NA  ++     L IV  +      R   E TG+  PL  
Sbjct: 165 PLPGVFISNRGVRVPSL--EGNALDWMLGGLALAIVAIIVLGHWGRKRQEATGRIFPLGR 222

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +  L+ GLP +  +A    L  D P L  FNF GG  +SPEF +L   L  YT+AF+AE
Sbjct: 223 AAIALLIGLPIVGWLASGASLALDMPALKGFNFQGGLNMSPEFAALLAGLVIYTSAFVAE 282

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VRSG+ AV +GQ EAA +LGL   +  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA
Sbjct: 283 VVRSGIQAVNQGQWEAAGSLGLRRAQVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVA 342

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G+ D+VSV  T +NQTGQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 343 IGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLTISIFMNWYNKRIALVER 396


>gi|33598478|ref|NP_886121.1| putative amino acid ABC transporter permease protein [Bordetella
           parapertussis 12822]
 gi|33574607|emb|CAE39257.1| putative amino acid ABC transporter permease protein [Bordetella
           parapertussis]
          Length = 396

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 164/354 (46%), Positives = 226/354 (63%), Gaps = 3/354 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V+N  +N+   N++ G GFL   AGF I +  + Y+   +Y  AILVG +NT  +A  G+
Sbjct: 45  VSNTLHNLSVRNIATGFGFLDREAGFAIGETPIAYSPSDTYGRAILVGVLNTLRVAVIGI 104

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + AT++GTL+G GRLS N LV  +  +YVEV RN+P L+ +FF Y  +   +P P  +  
Sbjct: 105 VLATLLGTLIGIGRLSKNWLVTRLTSIYVEVMRNVPLLLQLFFWYALITENMPGPRQAHN 164

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              G+F++NRG+  P+L  + NA  ++     L IV  +      R   E TG+  PL  
Sbjct: 165 PLPGVFISNRGVRVPSL--EGNALDWMLGGLALAIVAIIVLGHWGRKRQEATGRIFPLGR 222

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +  L+ GLP +  +A    L  D P L  FNF GG  +SPEF +L   L+ YT+AF+AE
Sbjct: 223 AAIALLIGLPIVGWLASGASLALDMPALKGFNFQGGLNMSPEFAALLAGLAIYTSAFVAE 282

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VRSG+ AV +GQ EAA +LGL   +  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA
Sbjct: 283 VVRSGIQAVNQGQWEAAGSLGLRRAQVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVA 342

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G+ D+VSV  T +NQTGQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 343 IGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLTISIFMNWYNKRIALVER 396


>gi|330446206|ref|ZP_08309858.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490397|dbj|GAA04355.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 399

 Score =  292 bits (747), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 178/385 (46%), Positives = 244/385 (63%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S+    Y+     +  Q++  + L   F   VNN   N+E   +S G  FL++ AGF I 
Sbjct: 15  SKQSIFYNPTFRAVIFQVVAVVGLVFFFYSIVNNALTNLESRGISTGFDFLTQEAGFGIG 74

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ Y    SY    +VG +NT  +A  G+I ATIIG ++G  RLS+N L++ +  VY+
Sbjct: 75  LTLIEYDETYSYGRTFVVGLLNTALVAVLGIILATIIGFIMGVARLSSNWLISRLAAVYI 134

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EVFRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGLS P+    + ++I  + 
Sbjct: 135 EVFRNIPLLLQIFFWYFAVLQALPSPRQSVSLGEAIFLNVRGLSIPSPIYGSGSEIIGWC 194

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             + +VLS+   R ++   ++TG+ LP+LY    L+ GLP +        +  + P L  
Sbjct: 195 LAIAVVLSIIFYRYAKKKQQQTGQQLPVLYTVAGLVLGLPLIAFFVTGMPITLEYPELKG 254

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG T+ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA ALGL+  K  RL
Sbjct: 255 FNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEALGLSKGKTLRL 314

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 315 VVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMA 374

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +L MN  N K+AL E+
Sbjct: 375 VYLTLSLLTSLLMNIYNKKVALVER 399


>gi|148980391|ref|ZP_01816034.1| ABC-type amino acid transport system, permease component
           [Vibrionales bacterium SWAT-3]
 gi|145961263|gb|EDK26575.1| ABC-type amino acid transport system, permease component
           [Vibrionales bacterium SWAT-3]
          Length = 401

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 172/385 (44%), Positives = 239/385 (62%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S    LY+    ++  QII    L   F   VNN   N+E   ++ G  FLS+ AGF I 
Sbjct: 17  SSANLLYNPTFRSVVFQIIAIGALGAFFYTIVNNALTNLEARGIATGFDFLSQEAGFGIG 76

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             +V Y    SY    +VG +NT  ++  G+I AT++G  +G  RLS+N LV+    VY+
Sbjct: 77  LTLVEYDETFSYGRTFVVGLLNTALVSVLGIILATVLGFSMGIARLSSNWLVSRFAAVYI 136

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL  P   ++  +   + +
Sbjct: 137 EIFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYLPAPVLEQGSSFVIAA 196

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++GIV ++     + +  + TG+  P+L I+  LI GLP +V   L   +  + P L  
Sbjct: 197 LIVGIVATIIINIWANNKQKLTGQQTPMLRIALSLIVGLPLVVYFVLGMPISAEYPELKG 256

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   +  +L
Sbjct: 257 FNFRGGISIIPELAALVLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRARTLKL 316

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 317 VIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMG 376

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +  MN  N K+AL E+
Sbjct: 377 VYLTLSLLTSALMNIYNRKVALVER 401


>gi|146308574|ref|YP_001189039.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145576775|gb|ABP86307.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 394

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/368 (45%), Positives = 231/368 (62%), Gaps = 2/368 (0%)

Query: 32  ILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           ILA++  V   W +  N   N+EK  +  G GFLS  AGF I Q ++ Y+   SY    +
Sbjct: 27  ILAVIAVVALGWFLFQNTQTNLEKRGIVSGFGFLSNSAGFGIAQHLIDYSESDSYGRVFV 86

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           +G +NT  ++F G++ A+I+G ++G  RLS N L++ +  VY+E+FRNIPPL+ I F Y 
Sbjct: 87  IGLLNTLLVSFIGIVLASILGFILGVARLSPNWLISKLATVYIEIFRNIPPLLQILFWYF 146

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
           +V   LP P  S+ +    FLN+RGL  P      +  +F    +  IV  +   R ++ 
Sbjct: 147 AVFLALPGPRQSLDIGETFFLNSRGLYMPAPGPSESFGLFAVVLLATIVGIIALGRWAKK 206

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
             E TGK  PLL+ S  LI  +P L ++     L +  P L  FNF GG  + PE M+L 
Sbjct: 207 RREATGKIFPLLWTSLALIVVIPGLTVLIGGNPLVWSVPELRGFNFRGGWVMIPELMALT 266

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YTAAFIAE VRSG++AV  GQ EAA +LGL      RLV++PQA+R IIPPLTSQ
Sbjct: 267 LALTIYTAAFIAENVRSGIMAVSHGQTEAARSLGLRPGITLRLVIIPQALRVIIPPLTSQ 326

Query: 331 YLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           YLNL KNSSLA  +G+ D+VS+  GT++NQTGQAIE+I I M +YL++SI I+L MN  N
Sbjct: 327 YLNLAKNSSLAAGIGYPDMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISLLMNWYN 386

Query: 390 AKIALKEK 397
            +IAL E+
Sbjct: 387 KRIALIER 394


>gi|86148623|ref|ZP_01066905.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. MED222]
 gi|218709393|ref|YP_002417014.1| amino-acid ABC transporter permease [Vibrio splendidus LGP32]
 gi|85833579|gb|EAQ51755.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. MED222]
 gi|218322412|emb|CAV18565.1| Amino-acid ABC transporter permease protein [Vibrio splendidus
           LGP32]
          Length = 401

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 167/379 (44%), Positives = 237/379 (62%), Gaps = 1/379 (0%)

Query: 20  YDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPY 79
           Y+    +I  QI+    L   F   VNN   N++   ++ G  FLS+ AGF I   ++ Y
Sbjct: 23  YNPTFRSIVFQILAVAALCAFFYTIVNNALTNLDSRGIATGFDFLSQEAGFGIGLTLIEY 82

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               SY     +G +NT  ++  G++ AT++G  +G  RLS+N LV+    VY+E+FRNI
Sbjct: 83  DETFSYGRTFFIGLLNTALVSVLGIMLATVLGFSMGIARLSSNWLVSRFAAVYIEIFRNI 142

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P L+ IFF Y +VL  LP    S+ L   +FLN RGL FP   ++  + I + S ++GI+
Sbjct: 143 PLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVLEQGSSIVIASLIVGII 202

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
            +      + +  + TG+  P+L I+  LI GLP +    +   +  + PVL  FNF GG
Sbjct: 203 ATFVINIWANNKQKLTGQQTPMLRIAAALIVGLPLVTYFVMGMPISAEYPVLKGFNFKGG 262

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   +  +LV++PQA
Sbjct: 263 ISIIPELAALMLALSIYTAAFIAEIVRSGINAVNHGQTEAAMSLGLPRTRTLKLVIIPQA 322

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLS 378
           +R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE+I + M +YL+LS
Sbjct: 323 LRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEVIAMTMGVYLTLS 382

Query: 379 IMIALFMNRLNAKIALKEK 397
           ++ +  MN  N K+AL E+
Sbjct: 383 LLTSALMNIYNRKVALVER 401


>gi|288958132|ref|YP_003448473.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288910440|dbj|BAI71929.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 399

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 163/380 (42%), Positives = 231/380 (60%), Gaps = 2/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D     I  QI++   + ++  + ++N  +N+ + +++ G  FL   A F I + ++ 
Sbjct: 21  LSDPTFRAIVYQILVVGAVVLVGWFLISNTLDNLARRSIATGYHFLEREAAFGIGESLID 80

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SY  A LVG +NT  ++  G++ AT+IGT++G  RLS+N L+A +   YVE+ RN
Sbjct: 81  YSPKDSYGRAFLVGVLNTLKVSIIGVVLATVIGTIIGVARLSSNWLIARLASTYVEIIRN 140

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPF-GMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           IPPL+ +FF Y  V   LP P    + P  G+FL+ RGL  P    D        +F++G
Sbjct: 141 IPPLLQLFFWYALVSDGLP-PVRQALNPLPGVFLSQRGLRVPVPAADPVWSSMGIAFLVG 199

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I  +   +R ++    +TG+  P  +    LI GLP L  +A       D P L  FNF 
Sbjct: 200 IAAAWGVSRWAKARQARTGQRFPAGWAGLGLIIGLPILAWLAGGAPTALDMPTLAGFNFS 259

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  +SPEF ++   L+ YTAAFIAE+VRSG+ AV  GQ EAA ALGL      RLV+LP
Sbjct: 260 GGLAISPEFFAILTGLTLYTAAFIAEVVRSGIKAVNWGQTEAARALGLPSGPTLRLVILP 319

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R I+PPLTSQYLNL KNSSLA+A+G+ DLVS+  T +NQTGQAIE + + M  YL +
Sbjct: 320 QALRVIVPPLTSQYLNLTKNSSLALAIGYPDLVSIANTTLNQTGQAIEGVTMIMGTYLVI 379

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ I++FMN  N +IAL E+
Sbjct: 380 SLSISIFMNWYNKRIALVER 399


>gi|90578888|ref|ZP_01234698.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90439721|gb|EAS64902.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 399

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 178/385 (46%), Positives = 244/385 (63%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S+    Y+     +  Q+I  + L   F   VNN   N+E   +S G  FLS+ AGF I 
Sbjct: 15  SKQNIFYNPTFRAVIFQLIAVIGLAFFFYSIVNNALTNLESRGISTGFDFLSQEAGFGIG 74

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ Y    +Y    +VG +NT  +A  G+I ATIIG ++G  RLS+N L++ +  VY+
Sbjct: 75  LTLIDYDETYTYGRTFVVGLLNTALVAVLGIILATIIGFIMGIARLSSNWLISRLAAVYI 134

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EVFRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGLS P+    + ++I  + 
Sbjct: 135 EVFRNIPLLLQIFFWYFAVLQALPSPRQSVSLGEAIFLNVRGLSIPSPIYGSGSEIIGWC 194

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             + ++LS+   R ++   ++TG+ LP+LY    L+ GLP +        +  + P L  
Sbjct: 195 LAIAVMLSIIFYRYAKTKQQQTGQQLPVLYTVAGLVLGLPLVAFFVTGMPITLEYPELKG 254

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG T+ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA ALGL+  K  RL
Sbjct: 255 FNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEALGLSKSKTLRL 314

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 315 VVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMA 374

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +L MN  N K+AL E+
Sbjct: 375 VYLTLSLLTSLLMNIYNKKVALVER 399


>gi|260768537|ref|ZP_05877471.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260616567|gb|EEX41752.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
          Length = 402

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 172/394 (43%), Positives = 240/394 (60%), Gaps = 2/394 (0%)

Query: 6   RKTVTRYFSR-MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           +KT +   S+     Y+    ++  Q+I    L   F   +NN   N+E   ++ G  FL
Sbjct: 9   QKTASAAPSKGTSLFYNPTFRSVVFQLIAIAALVFFFYTIINNALTNLESRGIATGFDFL 68

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            + AGF I   ++ Y    SY    +VG +NT  ++  G+I AT+IG ++G  RLS+N L
Sbjct: 69  DQPAGFGIGLTLIDYNETYSYGRTFVVGLLNTALVSVLGIILATMIGFVLGIARLSSNWL 128

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP    +
Sbjct: 129 VSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRESMSLGEAVFLNVRGLFFPAPVFE 188

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             + + + +FV G++ S+     + +    TG+  P+  I   L  GLP +V   +   +
Sbjct: 189 PGSSVVLIAFVAGVIASIVINIWANNKQRLTGQQTPMGRIVLVLCVGLPLIVYFIMGMPI 248

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 249 SAQYPELKGFNFRGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLG 308

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 309 LPRSKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 368

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 369 IEIIAMTMGVYLALSLITSALMNLYNRKVALVER 402


>gi|187479527|ref|YP_787552.1| L-amino acid ABC transporter permease [Bordetella avium 197N]
 gi|115424114|emb|CAJ50667.1| L-amino acid ABC transporter, permease protein [Bordetella avium
           197N]
          Length = 392

 Score =  289 bits (739), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 163/353 (46%), Positives = 222/353 (62%), Gaps = 1/353 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V+N  +N+   N+S G GFL   AGF I +  + YT   +Y  AI+VG +NT  +A  G+
Sbjct: 41  VSNTLHNLTVRNISTGFGFLDREAGFAIGETPIAYTPADTYGRAIMVGLLNTLRVAVLGI 100

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           I ATI+GTL+G GRLS N LVA +  +YVEV RN+P L+ +FF Y  +   +P P  +  
Sbjct: 101 ILATILGTLIGIGRLSKNWLVARLTSLYVEVMRNVPLLLQLFFWYALITENMPGPRQAHN 160

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
              G+F++NRG+  P   +  +    +    + I+ +L+    ++     TG+  PL+  
Sbjct: 161 PLPGVFISNRGIKIPE-AVGNSLDWILLGLAIAIIATLYLGHWAKKRQHATGQVFPLIRT 219

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  L+  LP L  +    QL    P L  FNF GG T++PEF +L   L  YT+AFIAE+
Sbjct: 220 AIGLLIVLPVLGWLLSGMQLTLTMPELKGFNFQGGLTLTPEFAALLAGLVIYTSAFIAEV 279

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ AV  GQ EAA ALGL      RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+
Sbjct: 280 VRSGIQAVNNGQWEAAGALGLRRSLVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVAI 339

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G+ D+VSV  T +NQTGQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 340 GYPDIVSVVNTTLNQTGQAIEGILIIMAAYLTVSLSISIFMNWYNKRIALVER 392


>gi|260778551|ref|ZP_05887443.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604715|gb|EEX31010.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 347

 Score =  289 bits (739), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 164/347 (47%), Positives = 229/347 (65%), Gaps = 1/347 (0%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111
           ME   ++ G GFL++ AGF I   ++ Y    SY    ++G +NT  ++  G+I AT+IG
Sbjct: 1   MEARGIATGFGFLTQEAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIG 60

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            ++G  RLS+N LV+ +  VY+E FRNIP L+ IFF Y +VL  LP    S+ L   +FL
Sbjct: 61  FVMGIARLSSNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFL 120

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N RGL FP+   +  + I + SFV+GI+ ++F +  +R+    TG+  P+  I+  LI  
Sbjct: 121 NVRGLYFPSPIFEAGSSIVIASFVIGIIATVFISIWARNKQRLTGQQTPMGRIALGLIVV 180

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            PT+V   +   +  + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ A
Sbjct: 181 FPTVVYFLMGSPISAEYPELKGFNFKGGVSIIPELAALLLALSIYTASFIAEIVRSGINA 240

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA++LGL   +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVS
Sbjct: 241 VSHGQTEAAMSLGLPRSRTLKLVIVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVS 300

Query: 352 V-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V  GT +NQTGQAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 301 VFAGTTLNQTGQAIEIIAMTMAVYLSLSLITSALMNIYNRKVALVER 347


>gi|254508777|ref|ZP_05120889.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219548297|gb|EED25310.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 371

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 170/369 (46%), Positives = 237/369 (64%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  L L   F   VNN  +N+E   ++ G GFL + AGF I   ++ Y    SY    
Sbjct: 3   QIIAILALFFFFYTIVNNALSNLEARGIATGFGFLDQEAGFGIGLTLIEYDETYSYGRTF 62

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L+G +NT  ++F G+I AT++G ++G  RLS N LV+ +  VY+E+FRN+P L+ IFF Y
Sbjct: 63  LIGLLNTALVSFLGIILATVVGFVMGVARLSNNWLVSRLAAVYIEIFRNVPLLLQIFFWY 122

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP    S+ L   +FLN RGL FP    +  + + + S V+G++ S+F    +R
Sbjct: 123 FAVLQALPSARQSLSLGEAIFLNVRGLYFPAPIFEAGSGVVIASLVIGVLASIFVGIWAR 182

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           +    TG+  P+  I   L+  LPT+V   +   +  + P L  FNF GG ++ PE  +L
Sbjct: 183 NKQRITGQQTPMGRIVFGLVVVLPTIVYFVMGSPISAEYPELKGFNFRGGISIIPELAAL 242

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   +  +LV++PQA+R IIPPLTS
Sbjct: 243 LLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLGLPKSRTLKLVIIPQALRIIIPPLTS 302

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+LS++ +  MN  
Sbjct: 303 QYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMAVYLTLSLLTSALMNIY 362

Query: 389 NAKIALKEK 397
           N K+AL E+
Sbjct: 363 NRKVALVER 371


>gi|84394264|ref|ZP_00992990.1| ABC-type amino acid transport system, permease component [Vibrio
           splendidus 12B01]
 gi|84375103|gb|EAP92024.1| ABC-type amino acid transport system, permease component [Vibrio
           splendidus 12B01]
          Length = 401

 Score =  288 bits (738), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 165/379 (43%), Positives = 236/379 (62%), Gaps = 1/379 (0%)

Query: 20  YDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPY 79
           Y+    +I  QI+    L   F   VNN   N++   ++ G  FLS+ AGF I   ++ Y
Sbjct: 23  YNPTFRSIVFQILAVGALCAFFYTIVNNALTNLDSRGIATGFDFLSQEAGFGIGLTLIEY 82

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               SY     +G +NT  ++  G++ AT++G  +G  RLS+N LV+    +Y+E+FRNI
Sbjct: 83  DETFSYGRTFFIGLLNTALVSVLGIMLATVLGFSMGIARLSSNWLVSRFAAIYIEIFRNI 142

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P L+ IFF Y +VL  LP    S+ L   +FLN RGL FP   ++  + I + S + G++
Sbjct: 143 PLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVLEQGSSIVIASLITGVI 202

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
            +      + +  + TG+  P+L I+  LI GLP +    +   +  + PVL  FNF GG
Sbjct: 203 ATFVINIWANNKQKLTGQQTPMLRIAAALIVGLPLVTYFVMGMPISAEYPVLKGFNFKGG 262

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   +  +LV++PQA
Sbjct: 263 ISIIPELAALMLALSIYTAAFIAEIVRSGINAVNHGQTEAAMSLGLPRTRTLKLVIIPQA 322

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLS 378
           +R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE+I + M +YL+LS
Sbjct: 323 LRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEVIAMTMGVYLTLS 382

Query: 379 IMIALFMNRLNAKIALKEK 397
           ++ +  MN  N K+AL E+
Sbjct: 383 LLTSALMNIYNRKVALVER 401


>gi|323492613|ref|ZP_08097757.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
 gi|323312988|gb|EGA66108.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
          Length = 400

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 173/385 (44%), Positives = 237/385 (61%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S     Y+     +  QII    L   F   VNN   N+E   ++ G  FL++ AGF I 
Sbjct: 16  SNANLFYNPTFRAVVFQIIAISALVFFFYTIVNNALTNLEARGIATGFDFLTQEAGFGIG 75

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ Y    SY    +VG +NT  ++F G+I AT+IG ++G  RLS+N LV+    VY+
Sbjct: 76  LTLIEYDETFSYGRTFMVGLLNTALVSFFGIILATVIGFVMGVARLSSNWLVSRFAAVYI 135

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    +  + I + S
Sbjct: 136 ETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVFEQGSSIVIAS 195

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FV+GIV ++     +++  + TG+  P+  I+  L   LP +V       +  D P L  
Sbjct: 196 FVIGIVATILIGVWAKNKQKLTGQQTPMGRIALGLCIALPVVVYFLAGAPISADYPELKG 255

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   +  +L
Sbjct: 256 FNFKGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRSRTLKL 315

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 316 VVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMA 375

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +  MN  N K+AL E+
Sbjct: 376 VYLTLSLLTSALMNLYNKKVALVER 400


>gi|220914745|ref|YP_002490053.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219952496|gb|ACL62886.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 403

 Score =  287 bits (734), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 161/378 (42%), Positives = 233/378 (61%), Gaps = 2/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  NI  Q+++   +T +  + ++N   N+E+  ++ G  FLS  AG  I + ++ Y 
Sbjct: 27  DPRFRNIVWQVVILSAVTAVAWFLISNTNRNLEQRRIATGFAFLSRTAGIPIGEHLIDYD 86

Query: 81  SD-SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
              S+Y  A+L+G +NT  +A  G++ AT+ GTL+G  RLS N LV+ +  VYVE+ R++
Sbjct: 87  PAVSTYGRALLIGVLNTLKVAVVGVVLATLWGTLLGIARLSRNWLVSKLAAVYVEIIRDV 146

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P L+ + F Y S+L  LP P  S     G+FL+NRG+  P +  D      + +  +G V
Sbjct: 147 PLLLQLLFWY-SILQALPAPRQSFHPVPGVFLSNRGVKIPFVEWDEPYWWALLALTVGAV 205

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
            +   +R +    E+ G    +  ++  L+ G P  V   L      D P L  F+F GG
Sbjct: 206 GTWAWSRAATRRQERIGTRPKVWPMAILLMVGFPVAVWAGLGAPFVADVPELRGFDFNGG 265

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T+SPE+ +L + L  YTAAFIAEIVRSG++AVP GQ EAA ALG+      R ++LPQA
Sbjct: 266 GTISPEYGALTMGLVIYTAAFIAEIVRSGILAVPTGQWEAAAALGVRRGIILRKIVLPQA 325

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R IIPP+TSQYLNL+KNSSLAVA+G+ D+VS+  T +NQTGQAIE I + M +YL +S+
Sbjct: 326 LRVIIPPMTSQYLNLIKNSSLAVAIGYQDIVSIANTTLNQTGQAIEGIAMVMLVYLVISL 385

Query: 380 MIALFMNRLNAKIALKEK 397
            I+LFMN  N +IAL E+
Sbjct: 386 SISLFMNWYNGRIALVER 403


>gi|315180249|gb|ADT87163.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 371

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 168/369 (45%), Positives = 230/369 (62%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q+I    L   F   +NN   N+E   ++ G  FL + AGF I   ++ Y    SY    
Sbjct: 3   QLIAIAALIFFFYTIINNALTNLESRGIATGFDFLDQPAGFGIGLTLIDYNETYSYGRTF 62

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++  G+I AT+IG ++G  RLS+N LV+ +  VY+E FRNIP L+ IFF Y
Sbjct: 63  VVGLLNTALVSVLGIILATMIGFVLGIARLSSNWLVSRLAAVYIETFRNIPLLLQIFFWY 122

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  S+ L   +FLN RGL FP    +  + + + +FV G++ S+     + 
Sbjct: 123 FAVLQALPSPRESMSLGEAVFLNVRGLFFPAPVFEPGSSVVLIAFVAGVIASIVINIWAN 182

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           +    TG+  P+  I   L  GLP +V   +   +    P L  FNF GG ++ PE  +L
Sbjct: 183 NKQRLTGQQTPMGRIVLVLCVGLPLIVYFIMGMPISAQYPELKGFNFRGGISIIPELAAL 242

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   K  +LV++PQA+R IIPPLTS
Sbjct: 243 LLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRSKTLKLVVIPQALRIIIPPLTS 302

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+LS++ +  MN  
Sbjct: 303 QYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLALSLITSALMNLY 362

Query: 389 NAKIALKEK 397
           N K+AL E+
Sbjct: 363 NRKVALVER 371


>gi|296272120|ref|YP_003654751.1| binding-protein-dependent transporter inner membrane component
           [Arcobacter nitrofigilis DSM 7299]
 gi|296096295|gb|ADG92245.1| binding-protein-dependent transport systems inner membrane
           component [Arcobacter nitrofigilis DSM 7299]
          Length = 393

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 166/400 (41%), Positives = 248/400 (62%), Gaps = 11/400 (2%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFL---WCVNNVYNNMEKSNLS 58
           +K  +KTV      + F  + ++  I  QI   L L  IFL   + ++N++ N+EK  ++
Sbjct: 1   MKEHKKTV----KGVAFYNNPKIRAIIYQI---LALAAIFLFTYYVLHNMFINIEKRGIN 53

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G  FL   AGF I   ++PYT   +Y    ++G +NT  ++  G+  +TIIG LVG GR
Sbjct: 54  TGFDFLGNEAGFGIISTLIPYTESDTYGRVFIIGILNTLLVSGIGIFFSTIIGLLVGIGR 113

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N +++ +C VYVE FRNIP L+ I F Y  VL+ LP P  S+      FLNNRGL  
Sbjct: 114 LSKNFMISKLCLVYVETFRNIPILLQILFWYNVVLAALPGPRQSMSYMDAFFLNNRGLYI 173

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P   +++     + +F++ I   ++  + ++  H++TG+  P+ + S  ++   P LV  
Sbjct: 174 PRPILESGFMSVIIAFLIAIAAVVYLAKWAKKKHDETGEEFPVFWTSLVILIASPVLVYF 233

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                   +   L  FNF+GG T +PE ++L  ALS Y A +IAE VR+G+ AVP+GQ E
Sbjct: 234 VSGSPATLEYAQLKGFNFVGGWTFTPELLALSFALSIYPATYIAEAVRAGIEAVPKGQKE 293

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA +LGL +    R V+LPQA+R IIPP+ +QYLNL+KNSSLA A+G+ +LV++  GT +
Sbjct: 294 AANSLGLKNHIILRKVVLPQALRVIIPPVINQYLNLMKNSSLATAIGYPELVTLFAGTAL 353

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQ GQAIEIIL+ M +YL++SI+I++ MN +NAKI +KE+
Sbjct: 354 NQVGQAIEIILMTMAVYLTISILISIVMNFINAKIQIKER 393


>gi|288962139|ref|YP_003452434.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288914405|dbj|BAI75890.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 385

 Score =  286 bits (732), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 160/382 (41%), Positives = 230/382 (60%), Gaps = 1/382 (0%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           ++ L   RV     Q +       +  + V+N   N+    ++ G GFL   AGFEI + 
Sbjct: 5   VQALNSARVRGWLYQALFLACALAVAWYLVSNTLTNLATRGVATGFGFLHREAGFEIGES 64

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y++  +Y  A+ VG +NT  ++ +G+  AT++G L+G GRLS+N +V     +YVE 
Sbjct: 65  LLSYSASDTYLKALAVGLLNTLAVSAAGVALATVLGVLIGVGRLSSNWMVNRFATLYVET 124

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN+P L+ +   Y +V++ LP P  ++ +  G+FL+NRG+ FP L         + + +
Sbjct: 125 VRNVPLLLQLVVWY-TVMNRLPSPREALEILPGIFLSNRGMKFPVLVEHAGHGWVLLALL 183

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
            GI  +    R  R   E TG+  P L I+   +   P    IA    L FD P L  FN
Sbjct: 184 AGIAAAFAVVRHGRRHREATGRPFPTLPIAIAAVLLPPAAAFIATGAPLAFDVPALAGFN 243

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG +V+PEF +L I LS YTA FIAEIVRSG++AVP GQ EA +ALGL+  +  RL++
Sbjct: 244 FEGGGSVTPEFTALLIGLSVYTAGFIAEIVRSGILAVPHGQTEAGLALGLSPGRILRLII 303

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R I+PPLTSQYLNL KNSSLAVA+G+ DLVSV  T  NQTGQ +E + + M +YL
Sbjct: 304 LPQALRVIVPPLTSQYLNLAKNSSLAVAIGYPDLVSVSNTSANQTGQVVEAVAMMMLVYL 363

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            +S+ I+ FMN  N ++AL  +
Sbjct: 364 VISLAISGFMNWYNRRVALVTR 385


>gi|118589035|ref|ZP_01546442.1| probable general l-amino acid transport permease abc transporter
           protein [Stappia aggregata IAM 12614]
 gi|118438364|gb|EAV44998.1| probable general l-amino acid transport permease abc transporter
           protein [Stappia aggregata IAM 12614]
          Length = 401

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 171/392 (43%), Positives = 233/392 (59%), Gaps = 8/392 (2%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           +R   L D +   I  Q++L + L  +    V N   N+E+ N++ G GF+   AGF  +
Sbjct: 10  ARASLLNDPKARGIFYQLVLVVALVTLGYVIVTNTIANLERQNIASGWGFVGNTAGFGTN 69

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +V Y+  SSY  A+ VGF+NT  +A  G+  AT+IG ++G  RLS N ++  +   YV
Sbjct: 70  QSLVEYSETSSYGRALFVGFLNTLLVAGVGIFFATVIGFIIGIARLSNNWVINRLAYCYV 129

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+ RNIP L+ IFF Y +VL  +P       L     LN  GL  P   M T ++   ++
Sbjct: 130 ELVRNIPLLLQIFFWYFAVLRSIPSKREKWSLFDTFHLNIGGLRLPKPIMGTGSEWVGYA 189

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP---- 249
            ++GI  +    R +R   E TG+  P       LI  LP L    +   +  + P    
Sbjct: 190 LLIGIAAAFLVARWARKRQEATGQPFPSFLTGLGLILMLPILTYFVMGMPISLEHPNFVE 249

Query: 250 ---VLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              +L Q F    G  V PEF++L  AL+ YTA+FIAEIVR+G+ AV  GQ EAA ALGL
Sbjct: 250 TGPILRQGFELNVGLNVIPEFLALTAALAIYTASFIAEIVRAGIQAVSHGQTEAAHALGL 309

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +    RLV++PQAMR IIPPLTSQYLNL KNSSLAVA+ + DLVS+GGT++NQTGQAIE
Sbjct: 310 RNGPTLRLVVIPQAMRVIIPPLTSQYLNLTKNSSLAVAIAYPDLVSMGGTVLNQTGQAIE 369

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II IWM +YLSLS++ + FMN  N ++AL E+
Sbjct: 370 IIGIWMVVYLSLSLITSAFMNWYNQRMALVER 401


>gi|149191355|ref|ZP_01869608.1| ABC-type amino acid transport system, permease component [Vibrio
           shilonii AK1]
 gi|148834834|gb|EDL51818.1| ABC-type amino acid transport system, permease component [Vibrio
           shilonii AK1]
          Length = 400

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 169/382 (44%), Positives = 239/382 (62%), Gaps = 1/382 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             LY+    +I  Q+I  L L + F   VNN  NN+    ++ G  FL++ AGF I   +
Sbjct: 19  NLLYNPTFRSIVFQVIAVLALGLFFYTIVNNALNNLAARGIATGFDFLNQEAGFGIGLTL 78

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y    SY     VG +NT  ++  G++ AT++G ++G  RLS+N LV+    VY+E+F
Sbjct: 79  IEYDETFSYGRTFFVGLLNTALVSVLGIVLATVLGFVIGIARLSSNWLVSRFAAVYIEIF 138

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP       + + + +F+L
Sbjct: 139 RNIPLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVFGEGSSVVIGAFIL 198

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ ++     +++  + TG+  P+  I   LI  LP +V   +   +  + PVL  FNF
Sbjct: 199 GIIATIIINIWAKNKQKLTGQQTPMFRIGLGLIVVLPVVVFFVMGMPITAEYPVLKGFNF 258

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   +  +LV++
Sbjct: 259 KGGISIIPELAALTLALSIYTASFIAEIVRSGINAVNHGQTEAAMSLGLPKSRTLKLVVI 318

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQ GQAIEII + M +YL
Sbjct: 319 PQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQVGQAIEIIAMTMAVYL 378

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           +LS++ +  MN  N K+AL E+
Sbjct: 379 TLSLVTSALMNLYNKKVALVER 400


>gi|217977866|ref|YP_002362013.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylocella silvestris BL2]
 gi|217503242|gb|ACK50651.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylocella silvestris BL2]
          Length = 391

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 162/392 (41%), Positives = 231/392 (58%), Gaps = 9/392 (2%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R    ++  YD R   + +QI        +      +V  NME   ++  + FL + AGF
Sbjct: 4   RRHPALELWYDARARAVLLQIAFVAAFVALAALAFIDVRANMEARGIATDLSFLGKVAGF 63

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I+Q ++PY++ S+Y  A +VG +NT  +A   +  AT++G +VG  RLS N +V     
Sbjct: 64  DINQSLIPYSAASTYGRAFIVGLLNTLLVAAVSLALATVLGFIVGFARLSKNWIVGQTAM 123

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVE  RN+P L+ + F Y +VL  LP P  S+ LPFGMFLNNRGL  P    +  A   
Sbjct: 124 AYVEAVRNVPLLLQLLFWYNAVLKPLPSPKQSLPLPFGMFLNNRGLFAPAPVFEAGA--- 180

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALP----LLYISTFLIFGLPTLVLIALKYQLHF 246
            F  V+   +S+ A    R   ++   A P       ++  ++  LP    +     + F
Sbjct: 181 -FWLVIAAAVSILAAIAMRLTPKRVKFATPPRAFFSGVAAAVLIVLPLAAFVGAGTPIAF 239

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            +P L  FNF+GG  + PEF++L + LS YTAAFIAEIVR+G+ AVPRGQ EAA A+GL 
Sbjct: 240 IQPELKGFNFVGGVRLLPEFVALVLGLSLYTAAFIAEIVRAGVEAVPRGQREAAAAIGLN 299

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
              A R V+ PQAMR I+P LTSQYLNL+KNSSLAV +G+ DLV V  GT++NQTG A++
Sbjct: 300 SAAANRFVIAPQAMRLIVPLLTSQYLNLIKNSSLAVFIGYPDLVQVFAGTVLNQTGAAVQ 359

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +I I M +YL++S++ +L MN    + AL E+
Sbjct: 360 VIFITMAVYLAISLLASLAMNLYGRRFALVER 391


>gi|323698173|ref|ZP_08110085.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323458105|gb|EGB13970.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 383

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/369 (43%), Positives = 227/369 (61%), Gaps = 2/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q++L   +  + L   +N   N+E  N++ G  FLS   G  I+  ++PYT   +Y  A 
Sbjct: 16  QVLLIGAILYVALQLFHNTQANLEARNIASGFRFLSVEGGLPINDSLLPYTPADTYGRAF 75

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG VNT +++   ++ ATI+G LVG  R+S N LVA +  VYVEV RNIP L+ +FF Y
Sbjct: 76  LVGIVNTLFVSALSIVLATILGVLVGVARVSTNWLVAKLAAVYVEVLRNIPLLLTLFFCY 135

Query: 150 KSVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
            ++L+ LP P  S+  PFG +F+NNRG+  P   +       + + V  +  S+F  R +
Sbjct: 136 STLLAFLPSPRKSLT-PFGDIFINNRGVFVPRPILQDGMGWVLLALVAAVAASIFLVRAA 194

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +   ++TG A    +IS  L+ GLP          L FD PVL  FNF GG  + PEF +
Sbjct: 195 KRMRDETGNAPRAGWISLGLVLGLPLAAYYLAGRPLAFDVPVLKGFNFKGGMILRPEFTA 254

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L I L  YTAAFI E VRSG+ +V +GQ+EAA ALGL      R V+LPQ +R  IP  T
Sbjct: 255 LLIGLVLYTAAFIGENVRSGIQSVDKGQLEAAKALGLKPGVIMRKVILPQTLRVCIPATT 314

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + Y +L+KNSSLAVA+G+ D+VS+GGTII Q  QAIEII +WM +YL++++ ++L MN  
Sbjct: 315 NDYTSLVKNSSLAVAIGYPDMVSIGGTIIGQNDQAIEIIGMWMAVYLTINLAVSLVMNWF 374

Query: 389 NAKIALKEK 397
           NAK+ L E+
Sbjct: 375 NAKVQLVER 383


>gi|330811533|ref|YP_004355995.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379641|gb|AEA70991.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 393

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 164/380 (43%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPRVRAWVFQIVTVVAVIALGWFLFDNTQTNLQHRGITSGFGFLERSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   SYA   ++G +NT  + F G+I ATI+G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTEADSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSQNWIISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   +P P  +       F+++RGL+ P   M      FV S VL I
Sbjct: 134 IPPLLQILFWYFAVFLSMPGPRAAHNFGDTFFVSSRGLNMPAALMAEGFWPFVISVVLAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +  TR +    E TG+     ++   L   +P L  +     +H++ P L  FNF+G
Sbjct: 194 VAIVLMTRWANKRFEATGEPFHKFWVGLALFLVIPALSALLFGAPVHWEMPELKGFNFVG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL +    R V++PQ
Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|209695503|ref|YP_002263432.1| general L-amino acid ABC transporter permease protein [Aliivibrio
           salmonicida LFI1238]
 gi|208009455|emb|CAQ79741.1| general L-amino acid ABC transporter permease protein [Aliivibrio
           salmonicida LFI1238]
          Length = 373

 Score =  283 bits (723), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 172/380 (45%), Positives = 229/380 (60%), Gaps = 16/380 (4%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           LY+     I  Q++    L   F   VNN  +N+E    S GIG             +V 
Sbjct: 9   LYNPTFRAILFQVLAITALGFFFYTIVNNALSNLE----SRGIGL-----------SLVE 53

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SY    +VG +NT  ++  G++ ATI+G  VG  RLS+N LV+    VY+E FRN
Sbjct: 54  YDETYSYGRTFIVGLLNTALVSVLGVLLATILGFTVGIARLSSNWLVSRCAAVYIETFRN 113

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP+   +  + +   + VL I
Sbjct: 114 IPLLLQIFFWYFAVLPALPSPRQSLSLGESIFLNVRGLFFPSPIFEEGSNLIGMAVVLAI 173

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +F +R + +    TG+  P++  S  L+  LPTL        +  + P L  FNF G
Sbjct: 174 VFIIFLSRWAHNKQTLTGQQTPVVRYSILLLIALPTLAYFISGMPVSIEYPELKGFNFRG 233

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA+ALGL   K  +LV++PQ
Sbjct: 234 GISIIPELAALVVALSVYTASFIAEIVRSGINAVSYGQTEAAMALGLPRNKTLKLVVIPQ 293

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           AMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+L
Sbjct: 294 AMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMGVYLTL 353

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S++ +  MN  N K+AL E+
Sbjct: 354 SLLTSFVMNIYNNKVALVER 373


>gi|330962156|gb|EGH62416.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 393

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVISLGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I++ MN  N +IAL E+
Sbjct: 374 SISISMLMNWYNKRIALIER 393


>gi|104783491|ref|YP_609989.1| general amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95112478|emb|CAK17205.1| general amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 392

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 160/380 (42%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N+E   ++ G  FL   AGF I Q ++P
Sbjct: 13  LSDPRVRAWLFQILTVVFVAGLGWYLFHNTQTNLEHRGITSGFDFLERSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G++ AT++G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGIVLATLLGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  ++      FV +  L I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIQDTFFISNRGLNMPGASLAEGFWPFVVALGLAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +   R +    ++TG+     ++   L  G+P +  +     +H++ P L  FNF+G
Sbjct: 193 VAIVLMVRHANKRFDETGEPFHKFWVGLLLFIGIPGVCALLFGSPVHWEVPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|330887728|gb|EGH20389.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 393

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 234/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N+  N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNIQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|154248467|ref|YP_001419425.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154162552|gb|ABS69768.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 431

 Score =  282 bits (721), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 169/419 (40%), Positives = 239/419 (57%), Gaps = 35/419 (8%)

Query: 14  SRMKFLY-DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           SR ++ + D ++ +  +QI+LAL++  +      N   N+ +  ++ G GFL  RAGF I
Sbjct: 13  SRRRWSWTDPKLRSSVIQIVLALIMVWLVWSFYANAQANLSRLGIASGFGFLDNRAGFAI 72

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++PY    SY  A +VG +NT  +AF G++ AT+IG ++G  RLS N ++  +   Y
Sbjct: 73  SQTLIPYNESMSYGRAFVVGLLNTLLVAFLGVVLATLIGFVMGVARLSKNVVIKALASAY 132

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHS------------------IVLPF------- 167
           VE+ RN+PPL  I F Y +VLS LP P  S                  I L F       
Sbjct: 133 VEITRNLPPLFQIMFWYLAVLSTLPGPRQSWGFGLQPLFGAIGSGLSAIGLGFLGTPISN 192

Query: 168 --------GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
                    +F+NNRGL  P    +  +   +++ +  +V S    R ++   E TGK  
Sbjct: 193 FAAGLAAPSVFVNNRGLVLPRPVFEEGSMAILYALIAAVVASFVLARWAKKRREATGKPF 252

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P  +    L+  LP     A    +  + P L  FNF GG  V PEF++L +AL+ YT  
Sbjct: 253 PAFWAGLALLIALPLAASFAAGNPVTIETPELRGFNFAGGLKVIPEFVALLLALAIYTGG 312

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAEIVRSG++AV +GQ EAA +LGL +    RLV++PQAMR I+PPLTSQYLNL KNSS
Sbjct: 313 FIAEIVRSGILAVSKGQSEAAHSLGLRNGPTLRLVIIPQAMRVIVPPLTSQYLNLTKNSS 372

Query: 340 LAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L VAVG+ DL +V  GT +NQTGQAIEII + M +YL++SI+ +  M   N ++AL E+
Sbjct: 373 LGVAVGYPDLFAVFAGTTLNQTGQAIEIIAVTMAVYLTISILTSAIMGWYNKRVALVER 431


>gi|302188403|ref|ZP_07265076.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 393

 Score =  282 bits (721), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 158/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  FV S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFVVSLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|157162751|ref|YP_001460069.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           HS]
 gi|157068431|gb|ABV07686.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli HS]
          Length = 393

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGCFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|300928695|ref|ZP_07144213.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300463284|gb|EFK26777.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
          Length = 399

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|284923283|emb|CBG36377.1| ABC transporter, permease protein [Escherichia coli 042]
          Length = 399

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 159/369 (43%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   +I A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIIFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|71736483|ref|YP_273399.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257487409|ref|ZP_05641450.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289628606|ref|ZP_06461560.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289647199|ref|ZP_06478542.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|298485801|ref|ZP_07003880.1| ABC-type amino acid transport system, permease component yhdX
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|71557036|gb|AAZ36247.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298159827|gb|EFI00869.1| ABC-type amino acid transport system, permease component yhdX
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|320325828|gb|EFW81889.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327254|gb|EFW83268.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330867829|gb|EGH02538.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330882635|gb|EGH16784.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330988312|gb|EGH86415.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 393

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|261228274|ref|ZP_05942555.1| predicted amino-acid transporter subunit, membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255132|ref|ZP_05947665.1| predicted amino-acid transporter subunit, membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|13363615|dbj|BAB37565.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|209757448|gb|ACI77036.1| putative transport system permease protein [Escherichia coli]
 gi|209757450|gb|ACI77037.1| putative transport system permease protein [Escherichia coli]
 gi|209757452|gb|ACI77038.1| putative transport system permease protein [Escherichia coli]
 gi|209757454|gb|ACI77039.1| putative transport system permease protein [Escherichia coli]
 gi|209757456|gb|ACI77040.1| putative transport system permease protein [Escherichia coli]
          Length = 399

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|331664878|ref|ZP_08365783.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA143]
 gi|331058126|gb|EGI30108.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA143]
          Length = 393

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 159/369 (43%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   +I A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIIFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|194440034|ref|ZP_03072091.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 101-1]
 gi|253771900|ref|YP_003034731.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254163204|ref|YP_003046312.1| putative amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|194421038|gb|EDX37068.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 101-1]
 gi|242378803|emb|CAQ33595.1| yhdX, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253322944|gb|ACT27546.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975105|gb|ACT40776.1| predicted amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|253979261|gb|ACT44931.1| predicted amino-acid transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|323970316|gb|EGB65586.1| inner membrane transport system [Escherichia coli TA007]
          Length = 393

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|261252933|ref|ZP_05945506.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260936324|gb|EEX92313.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 400

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/382 (43%), Positives = 239/382 (62%), Gaps = 1/382 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             +Y+     +  QII    L   F   VNN   N+E   ++ G  FL + AGF I   +
Sbjct: 19  NLIYNPTFRAVVFQIIAIAALVFFFYTIVNNALTNLEARGIATGFDFLDQEAGFGIGLTL 78

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y    SY    ++G +NT  ++F G+I AT+IG ++G  RLS+N LV+ +  VY+E+F
Sbjct: 79  IEYDETYSYGRTFVIGLLNTALVSFFGIILATVIGFIMGIARLSSNWLVSRLAAVYIEIF 138

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN+P L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    +  + I V +FV+
Sbjct: 139 RNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPIFEQGSSIVVATFVI 198

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++ S+     +++  + TG+  P+  I+  L   LP +V   +   +  + P L  FNF
Sbjct: 199 GLIASIVIGIWAKNKQKLTGQQTPMGRIALGLCVVLPVIVYFLMGSPISAELPELKGFNF 258

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   +  +LV++
Sbjct: 259 RGGISIIPELAALLLALSIYTASFIAEIVRSGINAVNHGQTEAAMSLGLPRSRTLKLVVI 318

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL
Sbjct: 319 PQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYL 378

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           +LS++ +  MN  N K+AL E+
Sbjct: 379 TLSLLTSALMNIYNRKVALVER 400


>gi|224371699|ref|YP_002605863.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
 gi|223694416|gb|ACN17699.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
          Length = 386

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 149/349 (42%), Positives = 220/349 (63%), Gaps = 2/349 (0%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N   N+E  N++ G GFLS  +G  I   ++PYT   SY  A L+G +NT ++AF G++ 
Sbjct: 36  NTQANLEARNIASGFGFLSLESGMPISNSLLPYTPADSYGYAFLMGILNTLYVAFMGIVL 95

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           ATI+G L+G  R+S+N L++ +  +YVEV RNIP L+++FF Y   L+ LP P  S++ P
Sbjct: 96  ATIMGILIGVARVSSNWLISKLAEIYVEVLRNIPLLLILFFTYSIALAALPSPQKSLI-P 154

Query: 167 F-GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           F G FLNNRG+  P    +        +F+ GI++++   R     H +TG+ +P  ++ 
Sbjct: 155 FSGFFLNNRGIYLPRPMPEPGFWFVGMAFLAGILVAVLINRYGAKRHRETGRIIPSFFLG 214

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              +  LPT+        L ++  VL  FNF GG  + PEF +L   L  YTAAFI E V
Sbjct: 215 MIAVVTLPTIAWFLASTPLSWEFAVLRGFNFKGGLVIRPEFSALMTGLVLYTAAFIGENV 274

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V  GQ+ ++ ALGL      R V+LPQA+R IIP  T+ Y +L+KNSSLAVA+G
Sbjct: 275 RSGIQSVNIGQINSSKALGLPPGLTMRKVILPQALRVIIPATTNDYTSLVKNSSLAVAIG 334

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + D+VS+GGTII Q  QAIE+I IWM +Y+++++++++ MN LN K+ L
Sbjct: 335 YPDMVSIGGTIIGQNDQAIEVIAIWMGVYMTINLIVSMIMNWLNGKVQL 383


>gi|89092423|ref|ZP_01165377.1| general L-amino acid transport system permease protein AapQ
           [Oceanospirillum sp. MED92]
 gi|89083511|gb|EAR62729.1| general L-amino acid transport system permease protein AapQ
           [Oceanospirillum sp. MED92]
          Length = 393

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/355 (43%), Positives = 228/355 (64%), Gaps = 3/355 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           ++N   NME   +  G  FL   AGF+I   ++PY + ++Y    +VG +NT  ++  G+
Sbjct: 40  ISNTLANMEARGIQSGYDFLFNTAGFDILMSLIPYDATNTYGRTFIVGLLNTVLVSIIGI 99

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           I +TI+G ++G    S N L+  +   YVE FRNIP L+ IFF Y +VL+ LP    S+ 
Sbjct: 100 ILSTIVGFIMGVAHFSHNLLIRKLATAYVETFRNIPLLLQIFFWYFAVLAALPSARQSMS 159

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-TRLSRHFHEKTGKALPLLY 223
           L   +FLN RGL FP LT +  A + V++ +   ++ +F   R ++   + TG+  P+L+
Sbjct: 160 LGEVIFLNVRGLYFPGLTPEGGASV-VYAAIAAAIIGIFVLKRWAKKRQDDTGQQFPVLW 218

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +S  ++FGLP L LI + +   +D P L  FNF GG TV PE M+L +AL+ YT AFIAE
Sbjct: 219 VSLGMLFGLPLLALIVMGFPFAWDIPYLKGFNFRGGVTVIPELMALALALTVYTGAFIAE 278

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            VR+G+ AVP GQ EAA ++GL   K  +L+++PQAMR I+P L S+Y +L+KNS+LA A
Sbjct: 279 AVRAGIQAVPHGQTEAARSIGLKEGKIMKLIIVPQAMRVIVPLLNSEYQSLVKNSTLATA 338

Query: 344 VGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G+ DL +V  GT +NQTGQAIEI+ + M +Y  +++ I+  MNRLN+ +AL E+
Sbjct: 339 IGYPDLFTVFVGTTLNQTGQAIEIVFMTMAVYFVVNMTISFLMNRLNSSVALTER 393


>gi|126464336|ref|YP_001045449.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126106147|gb|ABN78677.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 398

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 153/385 (39%), Positives = 242/385 (62%), Gaps = 3/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S    LY      +  QI LA  + ++  +   NV  N+ + N++ G GFL + + FEI 
Sbjct: 16  SPKDILYSESFRTVVYQIALAAAVALLGFYLYQNVVENLARQNIATGFGFLGQVSQFEIG 75

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++ Y++  +Y  A+ VG +NT  ++ +G++ AT+IG  VG  R+S+N L+  +   YV
Sbjct: 76  ETLIAYSARDTYGRALAVGLMNTLSVSAAGIVVATVIGFSVGIARVSSNWLLQRLATAYV 135

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVF 192
           E+ RNIP ++ + F + +V+  LP P  ++ L +GM FL+NRGL+F   +        + 
Sbjct: 136 EIVRNIPVILQVIF-WAAVIRNLPAPRQAVEL-WGMGFLSNRGLTFAMPSAHAAHLWMLA 193

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + V GI L++ A+  ++   E TG+ + +L+    LI GLP LV +          P   
Sbjct: 194 ALVAGIALAILASHKAKRHREATGRYIDMLWPCVGLIVGLPLLVWLGFGAPHEISFPERR 253

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FNF GG+T+SPEF++L   +S Y++ FIAEIVR+G+ A PRGQ+EAA ++ L  R   R
Sbjct: 254 GFNFAGGATISPEFVALMTGISLYSSGFIAEIVRAGIQATPRGQVEAARSIALRPRFILR 313

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA+R I+PPLTSQY++L+KNSS+AV +G+ DLV++G T++NQTGQA+E I + M 
Sbjct: 314 YVVLPQALRVIVPPLTSQYVSLIKNSSIAVVIGYPDLVNIGNTVMNQTGQAVEAIAVMML 373

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL +S++ +L MN  N  +A+KE+
Sbjct: 374 VYLIVSLVTSLLMNFYNRLVAIKER 398


>gi|324020752|gb|EGB89971.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
          Length = 399

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|300817473|ref|ZP_07097689.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300904465|ref|ZP_07122311.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300916766|ref|ZP_07133476.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300946949|ref|ZP_07161180.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300958249|ref|ZP_07170396.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301304262|ref|ZP_07210376.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301326287|ref|ZP_07219660.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301647045|ref|ZP_07246877.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|309793850|ref|ZP_07688276.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331643969|ref|ZP_08345100.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H736]
 gi|331679343|ref|ZP_08380015.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H591]
 gi|300315067|gb|EFJ64851.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300403627|gb|EFJ87165.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300415952|gb|EFJ99262.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300453409|gb|EFK17029.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300529771|gb|EFK50833.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300840388|gb|EFK68148.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300846988|gb|EFK74748.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301074795|gb|EFK89601.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|308122807|gb|EFO60069.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|315137852|dbj|BAJ45011.1| putative amino-acid transporter subunit [Escherichia coli DH1]
 gi|315257197|gb|EFU37165.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|331037440|gb|EGI09664.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H736]
 gi|331073408|gb|EGI44731.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H591]
          Length = 399

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|15803804|ref|NP_289838.1| putative transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|38704157|ref|NP_312169.2| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|168758501|ref|ZP_02783508.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4401]
 gi|168764868|ref|ZP_02789875.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4501]
 gi|168777687|ref|ZP_02802694.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4196]
 gi|168802617|ref|ZP_02827624.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC508]
 gi|188025287|ref|ZP_02777415.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4113]
 gi|189010706|ref|ZP_02808847.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4076]
 gi|189403224|ref|ZP_02794142.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4486]
 gi|189404774|ref|ZP_02811171.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC869]
 gi|195940013|ref|ZP_03085395.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808155|ref|ZP_03250492.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4206]
 gi|208814005|ref|ZP_03255334.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4045]
 gi|208821360|ref|ZP_03261680.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4042]
 gi|209398125|ref|YP_002272731.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4115]
 gi|217327751|ref|ZP_03443834.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. TW14588]
 gi|254795211|ref|YP_003080048.1| putative amino-acid ABC transporter membrane protein [Escherichia
           coli O157:H7 str. TW14359]
 gi|291284636|ref|YP_003501454.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O55:H7 str. CB9615]
 gi|293416694|ref|ZP_06659333.1| general L-amino acid transport system permease [Escherichia coli
           B185]
 gi|12517900|gb|AAG58398.1|AE005554_9 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|187767136|gb|EDU30980.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4196]
 gi|188013746|gb|EDU51868.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4113]
 gi|188998882|gb|EDU67868.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4076]
 gi|189354692|gb|EDU73111.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4401]
 gi|189361801|gb|EDU80220.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4486]
 gi|189365199|gb|EDU83615.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4501]
 gi|189373997|gb|EDU92413.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC869]
 gi|189375430|gb|EDU93846.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC508]
 gi|208727956|gb|EDZ77557.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4206]
 gi|208735282|gb|EDZ83969.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4045]
 gi|208741483|gb|EDZ89165.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4042]
 gi|209159525|gb|ACI36958.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4115]
 gi|217320118|gb|EEC28543.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. TW14588]
 gi|254594611|gb|ACT73972.1| predicted amino-acid transporter subunit, membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290764509|gb|ADD58470.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O55:H7 str. CB9615]
 gi|291432050|gb|EFF05033.1| general L-amino acid transport system permease [Escherichia coli
           B185]
 gi|320189618|gb|EFW64277.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. EC1212]
 gi|320639915|gb|EFX09506.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. G5101]
 gi|320645631|gb|EFX14640.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H- str. 493-89]
 gi|320650941|gb|EFX19398.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H- str. H 2687]
 gi|320656322|gb|EFX24234.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320662012|gb|EFX29420.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666848|gb|EFX33827.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. LSU-61]
 gi|326337966|gb|EGD61800.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. 1125]
 gi|326347535|gb|EGD71260.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. 1044]
          Length = 393

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|300824983|ref|ZP_07105082.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300522549|gb|EFK43618.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
          Length = 399

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGCVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|49176333|ref|YP_026209.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89110029|ref|AP_003809.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|157158458|ref|YP_001464744.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           E24377A]
 gi|170018488|ref|YP_001723442.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170082797|ref|YP_001732117.1| amino-acid ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188494856|ref|ZP_03002126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 53638]
 gi|191169155|ref|ZP_03030913.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B7A]
 gi|193066460|ref|ZP_03047505.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E22]
 gi|193071518|ref|ZP_03052428.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E110019]
 gi|194430243|ref|ZP_03062740.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B171]
 gi|218696969|ref|YP_002404636.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|238902367|ref|YP_002928163.1| putative amino-acid transporter subunit [Escherichia coli BW2952]
 gi|254038435|ref|ZP_04872493.1| amino acid ABC transporter [Escherichia sp. 1_1_43]
 gi|256018817|ref|ZP_05432682.1| putative amino-acid transporter subunit [Shigella sp. D9]
 gi|256024157|ref|ZP_05438022.1| putative amino-acid transporter subunit [Escherichia sp. 4_1_40B]
 gi|260846074|ref|YP_003223852.1| putative transport system permease protein [Escherichia coli
           O103:H2 str. 12009]
 gi|301028301|ref|ZP_07191561.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|307139957|ref|ZP_07499313.1| putative transport system permease protein [Escherichia coli H736]
 gi|307314973|ref|ZP_07594561.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|312972462|ref|ZP_07786636.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 1827-70]
 gi|54042337|sp|P45767|YHDX_ECOLI RecName: Full=Putative amino-acid ABC transporter permease protein
           yhdX
 gi|48994930|gb|AAT48174.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|85676060|dbj|BAE77310.1| predicted amino-acid transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|157080488|gb|ABV20196.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E24377A]
 gi|169753416|gb|ACA76115.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169890632|gb|ACB04339.1| predicted amino-acid transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|188490055|gb|EDU65158.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 53638]
 gi|190900797|gb|EDV60588.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B7A]
 gi|192925889|gb|EDV80538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E22]
 gi|192955155|gb|EDV85648.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E110019]
 gi|194411714|gb|EDX28039.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B171]
 gi|218353701|emb|CAU99964.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|226840059|gb|EEH72080.1| amino acid ABC transporter [Escherichia sp. 1_1_43]
 gi|238862152|gb|ACR64150.1| predicted amino-acid transporter subunit [Escherichia coli BW2952]
 gi|257761221|dbj|BAI32718.1| putative transport system permease protein [Escherichia coli
           O103:H2 str. 12009]
 gi|260447705|gb|ACX38127.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|299878644|gb|EFI86855.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|306905556|gb|EFN36088.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|310334839|gb|EFQ01044.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 1827-70]
 gi|315062568|gb|ADT76895.1| predicted amino-acid transporter subunit [Escherichia coli W]
 gi|315617079|gb|EFU97689.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 3431]
 gi|323162954|gb|EFZ48789.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli E128010]
 gi|323376845|gb|ADX49113.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323936247|gb|EGB32539.1| inner membrane transport system [Escherichia coli E1520]
 gi|323941638|gb|EGB37817.1| inner membrane transport system [Escherichia coli E482]
 gi|332102249|gb|EGJ05595.1| his/Glu/Gln/Arg/opine ABC transporter permease [Shigella sp. D9]
          Length = 393

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|237799856|ref|ZP_04588317.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022711|gb|EGI02768.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 393

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVISLGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTESDTYARVFVIGLLNTLLVSVIGIVLATLLGFIIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I++ MN  N +IAL E+
Sbjct: 374 SISISMLMNWYNKRIALIER 393


>gi|330950964|gb|EGH51224.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae Cit 7]
          Length = 393

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|300979704|ref|ZP_07174654.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300307922|gb|EFJ62442.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|324009099|gb|EGB78318.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324015879|gb|EGB85098.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 399

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|170682235|ref|YP_001745539.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           SMS-3-5]
 gi|194435092|ref|ZP_03067329.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella dysenteriae 1012]
 gi|209920742|ref|YP_002294826.1| amino acid ABC transporter permease [Escherichia coli SE11]
 gi|218555834|ref|YP_002388747.1| amino-acid ABC transporter membrane protein [Escherichia coli IAI1]
 gi|260870020|ref|YP_003236422.1| putative transport system permease protein [Escherichia coli
           O111:H- str. 11128]
 gi|293449592|ref|ZP_06664013.1| general L-amino acid transport system permease [Escherichia coli
           B088]
 gi|170519953|gb|ACB18131.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli SMS-3-5]
 gi|194416654|gb|EDX32786.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella dysenteriae 1012]
 gi|209914001|dbj|BAG79075.1| amino acid ABC transporter permease component [Escherichia coli
           SE11]
 gi|218362602|emb|CAR00227.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|257766376|dbj|BAI37871.1| putative transport system permease protein [Escherichia coli
           O111:H- str. 11128]
 gi|291322682|gb|EFE62111.1| general L-amino acid transport system permease [Escherichia coli
           B088]
 gi|320181543|gb|EFW56461.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella boydii ATCC 9905]
 gi|323173471|gb|EFZ59100.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli LT-68]
 gi|323178550|gb|EFZ64126.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 1180]
 gi|323183029|gb|EFZ68428.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 1357]
 gi|323946884|gb|EGB42900.1| inner membrane transport system [Escherichia coli H120]
 gi|324119449|gb|EGC13332.1| inner membrane transport system [Escherichia coli E1167]
 gi|332086493|gb|EGI91640.1| general L-amino acid transport system permease protein aapQ
           [Shigella dysenteriae 155-74]
 gi|332087262|gb|EGI92395.1| general L-amino acid transport system permease protein aapQ
           [Shigella boydii 5216-82]
          Length = 393

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|309703688|emb|CBJ03029.1| ABC transporter, permease protein [Escherichia coli ETEC H10407]
          Length = 393

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRTGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIEAIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|26249861|ref|NP_755901.1| amino-acid ABC transporter permease YhdX [Escherichia coli CFT073]
 gi|227887997|ref|ZP_04005802.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein YhdX [Escherichia coli 83972]
 gi|300991068|ref|ZP_07179489.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301047874|ref|ZP_07194921.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|26110289|gb|AAN82475.1|AE016767_235 Hypothetical amino-acid ABC transporter permease protein yhdX
           [Escherichia coli CFT073]
 gi|227835393|gb|EEJ45859.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein YhdX [Escherichia coli 83972]
 gi|300300217|gb|EFJ56602.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300406989|gb|EFJ90527.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|315294822|gb|EFU54165.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315300934|gb|EFU60154.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
          Length = 399

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|331008999|gb|EGH89055.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 393

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y  V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTPVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|90409067|ref|ZP_01217192.1| ABC-type amino acid transport system, permease component
           [Psychromonas sp. CNPT3]
 gi|90309824|gb|EAS37984.1| ABC-type amino acid transport system, permease component
           [Psychromonas sp. CNPT3]
          Length = 394

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 161/369 (43%), Positives = 234/369 (63%), Gaps = 3/369 (0%)

Query: 32  ILALLLTVIFLWC-VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD-SSYATAI 89
           ++ALL+ V F +   NN+++N++   ++ G  FL   AGF I Q ++PY    SSY    
Sbjct: 26  VVALLIVVFFAYYFANNMFSNVQNRGITTGFSFLEHTAGFGISQTLIPYDDGTSSYLDVF 85

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++  G+  A++IG L+G GRLS+N LVA +  VY+E FRNIP L+ I F Y
Sbjct: 86  IVGLLNTLLVSVIGVFCASVIGLLIGIGRLSSNFLVAKLSMVYIETFRNIPILLQILFWY 145

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             VL+ LP   +S+     +FLNNRGL  P    +  +   + +F+L      F  R ++
Sbjct: 146 NIVLAALPSTRNSLNYFDAIFLNNRGLLLPKPLFEDGSGFILSAFILACFSVFFLARWAK 205

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             H+ +G+  PLL +S  L+   P LV   +   +H   PVL  FNF GG  + PE ++L
Sbjct: 206 KRHDLSGQEFPLLKVSLALLILCPLLVFFIVNQPIHAQYPVLKGFNFQGGLAIIPELLAL 265

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
             ALS YTA +IAE VR+G+ +V  GQ EAA +LGL      R V+LPQA+R IIPP+ +
Sbjct: 266 IFALSIYTATYIAEAVRAGINSVSTGQKEAAKSLGLKDHVILRKVVLPQALRVIIPPVIN 325

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLNL+KNSSLA A+G+ D+V++  GT +NQ GQAIEIIL+ M +YL +SI+I++ +N +
Sbjct: 326 QYLNLVKNSSLATAIGYPDIVTLFSGTTLNQVGQAIEIILMTMAVYLCISIVISVILNWV 385

Query: 389 NAKIALKEK 397
           NAK+A+K +
Sbjct: 386 NAKMAIKGR 394


>gi|218706884|ref|YP_002414403.1| amino-acid ABC transporter membrane protein [Escherichia coli
           UMN026]
 gi|293406871|ref|ZP_06650797.1| polar amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|298382612|ref|ZP_06992209.1| general L-amino acid transport system permease [Escherichia coli
           FVEC1302]
 gi|218433981|emb|CAR14898.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|291426877|gb|EFE99909.1| polar amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|298277752|gb|EFI19268.1| general L-amino acid transport system permease [Escherichia coli
           FVEC1302]
          Length = 393

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVIGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|66044326|ref|YP_234167.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63255033|gb|AAY36129.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 393

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|110643515|ref|YP_671245.1| amino acid ABC transporter permease [Escherichia coli 536]
 gi|191173839|ref|ZP_03035360.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli F11]
 gi|110345107|gb|ABG71344.1| hypothetical amino-acid ABC transporter permease protein YhdX
           [Escherichia coli 536]
 gi|190905889|gb|EDV65507.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli F11]
          Length = 393

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|307555364|gb|ADN48139.1| amino acid ABC transporter [Escherichia coli ABU 83972]
          Length = 393

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|218691563|ref|YP_002399775.1| amino-acid ABC transporter membrane protein [Escherichia coli ED1a]
 gi|218429127|emb|CAR10070.2| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
          Length = 393

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 THQIKTGQLRRTWPITAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|218560338|ref|YP_002393251.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218367107|emb|CAR04881.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|294493510|gb|ADE92266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli IHE3034]
 gi|307625130|gb|ADN69434.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily protein [Escherichia coli UM146]
 gi|323951211|gb|EGB47086.1| inner membrane transport system [Escherichia coli H252]
 gi|323957583|gb|EGB53297.1| inner membrane transport system [Escherichia coli H263]
          Length = 393

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|300925985|ref|ZP_07141808.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300417929|gb|EFK01240.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
          Length = 399

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQARRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|91212700|ref|YP_542686.1| amino acid ABC transporter permease [Escherichia coli UTI89]
 gi|117625558|ref|YP_858881.1| putative amino-acid ABC transporter permease protein yhdX
           [Escherichia coli APEC O1]
 gi|237705972|ref|ZP_04536453.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA]
 gi|91074274|gb|ABE09155.1| hypothetical amino-acid ABC transporter permease protein yhdX
           [Escherichia coli UTI89]
 gi|115514682|gb|ABJ02757.1| putative amino-acid ABC transporter permease protein yhdX
           [Escherichia coli APEC O1]
 gi|226899012|gb|EEH85271.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA]
 gi|315289023|gb|EFU48421.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
          Length = 399

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|289678217|ref|ZP_06499107.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 393

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|331659558|ref|ZP_08360500.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA206]
 gi|331054140|gb|EGI26169.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA206]
          Length = 393

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 229/369 (62%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI++ + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILVVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 THQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|330899537|gb|EGH30956.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 393

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVIAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|89093225|ref|ZP_01166175.1| general L-amino acid transport system permease protein AapQ
           [Oceanospirillum sp. MED92]
 gi|89082521|gb|EAR61743.1| general L-amino acid transport system permease protein AapQ
           [Oceanospirillum sp. MED92]
          Length = 393

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 152/355 (42%), Positives = 228/355 (64%), Gaps = 3/355 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           ++N   NME   +  G  FL   AGF+I   ++PY + ++Y    +VG +NT  ++  G+
Sbjct: 40  ISNTLANMEARGIQSGYDFLFNTAGFDILMSLIPYDATNTYGRTFIVGLLNTVLVSIIGI 99

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           I +T++G ++G    S N L+  +   YVE FRNIP L+ IFF Y +VL+ LP    S+ 
Sbjct: 100 ILSTMVGFIMGVAHFSHNLLIRKLATAYVETFRNIPLLLQIFFWYFAVLAALPSARQSMS 159

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-TRLSRHFHEKTGKALPLLY 223
           L   +FLN RGL FP LT +  A + V++ +   ++ +F   R ++   + TG+  P+L+
Sbjct: 160 LGEVIFLNVRGLYFPGLTPEGGASV-VYAAIAAAIIGIFVLKRWAKKRQDDTGQQFPVLW 218

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +S  ++FGLP L LI + +   +D P L  FNF GG TV PE M+L +AL+ YT AFIAE
Sbjct: 219 VSLGMLFGLPLLALIVMGFPFAWDIPYLKGFNFRGGITVIPELMALALALTVYTGAFIAE 278

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            VR+G+ AVP GQ EAA ++GL   K  +L+++PQAMR I+P L S+Y +L+KNS+LA A
Sbjct: 279 AVRAGIQAVPHGQTEAARSIGLKEGKIMKLIIVPQAMRVIVPLLNSEYQSLVKNSTLATA 338

Query: 344 VGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G+ DL +V  GT +NQTGQAIEI+ + M +Y  +++ I+  MNRLN+ +AL E+
Sbjct: 339 IGYPDLFTVFVGTTLNQTGQAIEIVFMTMAVYFVVNMTISFLMNRLNSSVALTER 393


>gi|221370066|ref|YP_002521162.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221163118|gb|ACM04089.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 398

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 151/384 (39%), Positives = 239/384 (62%), Gaps = 1/384 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S    LY      +  QI LA  + ++  +   NV  N+ + N++ G GFL + + FEI 
Sbjct: 16  SPKDILYSESFRTVVYQIALAAAVALLGFYLYQNVVENLARQNIATGFGFLGQVSQFEIG 75

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++ Y++  +Y  A+ VG +NT  ++ +G++ AT+IG  VG  R+S+N L+  +   YV
Sbjct: 76  ETLIAYSARDTYGRALAVGLMNTLSVSAAGIVVATVIGFSVGIARVSSNWLLQRLATAYV 135

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+ RNIP ++ + F + +V+  LP P  ++ L    FL+NRGL+F   +        + +
Sbjct: 136 EIVRNIPVILQVIF-WAAVIRNLPAPRQAVELWGLGFLSNRGLTFAMPSAHAAHLWMLAA 194

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            V GI L++ A+  ++   E TG+ + +L+    LI GLP LV +          P    
Sbjct: 195 LVAGIALAILASHKAKRHREATGRYIDMLWPCVGLIVGLPLLVWLGFGAPHEISFPERRG 254

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG+T+SPEF++L   +S Y++ FIAEIVR+G+ A PRGQ+EAA ++ L  R   R 
Sbjct: 255 FNFAGGATISPEFVALMTGISLYSSGFIAEIVRAGIQATPRGQVEAARSIALRPRFILRY 314

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA+R I+PPLTSQY++L+KNSS+AV +G+ DLV++G T++NQTGQA+E I + M +
Sbjct: 315 VVLPQALRVIVPPLTSQYVSLIKNSSIAVVIGYPDLVNIGNTVMNQTGQAVEAIAVMMLV 374

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL +S++ +L MN  N  +A+KE+
Sbjct: 375 YLIVSLVTSLLMNFYNRLVAIKER 398


>gi|215488576|ref|YP_002331007.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312968400|ref|ZP_07782609.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 2362-75]
 gi|215266648|emb|CAS11087.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312286618|gb|EFR14529.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 2362-75]
 gi|320194755|gb|EFW69385.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli WV_060327]
          Length = 393

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+       +  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|331649070|ref|ZP_08350158.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli M605]
 gi|331042817|gb|EGI14959.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli M605]
          Length = 399

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  +    I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+       +  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLHRTWPFAAVLIIGLPLLTQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|330909320|gb|EGH37834.1| glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli AA86]
          Length = 393

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  +    I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+       +  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLHRTWPFAAVLIIGLPLLTQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|331654868|ref|ZP_08355868.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli M718]
 gi|331048250|gb|EGI20327.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli M718]
          Length = 399

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 158/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  +       FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAASAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|119946444|ref|YP_944124.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119946448|ref|YP_944128.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865048|gb|ABM04525.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865052|gb|ABM04529.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 405

 Score =  279 bits (714), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 155/377 (41%), Positives = 232/377 (61%), Gaps = 2/377 (0%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT-S 81
           R   I  Q +  L +     +  +N+++N+EK  ++ G  FL E AGF + Q ++ Y  +
Sbjct: 29  RNRAIIFQCLALLAVVACAFYFTSNMFDNIEKRGITTGFSFLGETAGFGVSQSLIAYDDT 88

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S++    +VG +NT  +   G+I A++ G L+G GRLS+N +VA +  VY+E FRNIP 
Sbjct: 89  TSTFLDVFIVGILNTLLVGVIGIICASVFGLLIGIGRLSSNFIVAKLSLVYIETFRNIPI 148

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ I F Y  VL+ LP P  S      +FLNNRGL  P     + +   + +FV+     
Sbjct: 149 LLQILFWYNIVLAALPGPRQSFSYFESIFLNNRGLLLPEPIFQSGSIFILIAFVIACTAV 208

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F TR ++  H++TG+  PL+ +S  ++   P L        +  + P L  FNF GG  
Sbjct: 209 IFLTRWAKKRHDQTGEEFPLIKVSLAILIVSPLLAYFVTGQPITAEYPALKGFNFQGGLA 268

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           + PEF++L  ALS YTA +IAE VR+G+ AV  GQ EAA +LGL      R V+LPQA+R
Sbjct: 269 IIPEFLALTFALSIYTATYIAEAVRAGIEAVASGQKEAAESLGLKKHVILRKVVLPQALR 328

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            IIPP+ +QYLNL+KNSSLA A+G+ ++V++  GT +NQ GQAIEII++ M +YL+ SI+
Sbjct: 329 VIIPPVINQYLNLVKNSSLATAIGYPEIVTLFSGTTLNQVGQAIEIIMMTMAVYLTFSIV 388

Query: 381 IALFMNRLNAKIALKEK 397
           I+L +N +NAK+ +K +
Sbjct: 389 ISLLLNWVNAKMEIKGR 405


>gi|327484031|gb|AEA78438.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 401

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            ++ +   + + + GI    VLS++AT   R     TG+  P+      L    P LV  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L   +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA++LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +
Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTGQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|153825266|ref|ZP_01977933.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|183179359|ref|ZP_02957570.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|229515733|ref|ZP_04405192.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229529563|ref|ZP_04418953.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|149741094|gb|EDM55153.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|183012770|gb|EDT88070.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|229333337|gb|EEN98823.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229347502|gb|EEO12462.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
          Length = 401

 Score =  279 bits (713), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVMFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            ++ +   + + + GI    VLS++AT   R     TG+  P+      L    P LV  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L   +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA++LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +
Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTGQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|153212715|ref|ZP_01948372.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|229523537|ref|ZP_04412942.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|254225347|ref|ZP_04918959.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|254286187|ref|ZP_04961147.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|262192390|ref|ZP_06050543.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|297578946|ref|ZP_06940874.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|124116365|gb|EAY35185.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|125622188|gb|EAZ50510.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|150423856|gb|EDN15797.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|229337118|gb|EEO02135.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|262031743|gb|EEY50328.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|297536540|gb|EFH75373.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 401

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            ++ +   + + + GI    VLS++AT   R     TG+  P+      L    P LV  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L   +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA++LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +
Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTGQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|296104984|ref|YP_003615130.1| general L-amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059443|gb|ADF64181.1| general L-amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 393

 Score =  278 bits (712), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 162/369 (43%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  L + +I ++ ++N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QIIAILAVVLIAIYLIHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG +NT  ++   ++ A+I+G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 85  LVGLLNTLLVSALCIVFASILGFFIGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + ++ + LS    R +R
Sbjct: 145 FAVLRNLPGPRQAVDAFDLFFLSNRGLYIPSPELAEGIYAFIAAIIIALALSAGLFRYNR 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 KHQIKTGQLRKTWPIAALLIIGLPLLTHWLFGAALHWDVPHLRGFNFQGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL H    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSIYTSAFIAEIIRAGIQAVPHGQHEAARSLGLPHTVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLAISLLMNLY 384

Query: 389 NAKIALKEK 397
           N +IAL E+
Sbjct: 385 NRRIALVER 393


>gi|229521467|ref|ZP_04410886.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229341565|gb|EEO06568.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
          Length = 401

 Score =  278 bits (712), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYAIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMNLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            ++ +   + + + GI    VLS++AT   R     TG+  P+      L    P LV  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L   +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA++LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +
Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTGQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|83595862|gb|ABC25224.1| amino acid ABC transporter, permease protein [uncultured marine
           bacterium Ant4D3]
          Length = 394

 Score =  278 bits (712), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 159/383 (41%), Positives = 240/383 (62%), Gaps = 1/383 (0%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           ++  YD    ++ VQII A L+   F + +NN   N+      +   FL + A ++I+Q 
Sbjct: 12  LRAWYDKETRSVIVQIIAAALILAFFSFIINNAVVNLSNIGKDINFSFLWDNASYDINQH 71

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y+S SS+  A++VG +NT  +A +G++ ATI+G L+G  RLS+N L   I  VY+E 
Sbjct: 72  LIEYSSTSSHFRAMIVGLINTLLVAVAGIVLATILGFLLGVMRLSSNWLTQKIAYVYIEY 131

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN+P L+ I  L+  ++S LP P  S       FLNNRG   P+    +   I     V
Sbjct: 132 MRNVPVLLHILLLHGLIVSSLPRPKGSYNFGDTFFLNNRGFQMPSPEFQSLFWIVSGFVV 191

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
            G+  + + +R ++   + TGKA P+  I+   I  LP  V   L   + +D P L  FN
Sbjct: 192 GGLAFAWWFSRHAQKVQDTTGKAYPVALINIAAIVLLPLAVYFILGSPIEWDVPALKGFN 251

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG  + PEF++L++ALS YTAAFI EIVR+G++A+  GQ EAA ALG+++ +  +LV+
Sbjct: 252 FKGGMVIRPEFIALWLALSLYTAAFIGEIVRAGIVAIDHGQTEAAQALGISNSRVLKLVV 311

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILIWMFIY 374
           +PQA+R IIPPLTSQYLNL KNSSLA+A+G+ D+V ++GG  +NQTG+ +E +LI M IY
Sbjct: 312 IPQALRVIIPPLTSQYLNLAKNSSLALAIGYMDIVATIGGISLNQTGREMECMLIVMGIY 371

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L++S++I+  MN  N ++ L E+
Sbjct: 372 LAISLIISSGMNWYNNRMQLVER 394


>gi|153828789|ref|ZP_01981456.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|148875742|gb|EDL73877.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
          Length = 401

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLSVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            ++ +   + + + GI    VLS++AT   R     TG+  P+      L    P LV  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVAFPVLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L   +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA++LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +
Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTGQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|327395462|dbj|BAK12884.1| amino acid ABC transporter permease protein YhdX [Pantoea ananatis
           AJ13355]
          Length = 392

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 156/356 (43%), Positives = 222/356 (62%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+    ++ G GFL   AGF I Q ++ YT   +YA   LVG  NT  ++  
Sbjct: 37  YLIHNTVINLANRGITSGFGFLERNAGFGIVQHLIDYTEGDTYARVFLVGLTNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  +G  RLS N L+  I  +Y+E FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CIVFASVLGFFIGLARLSDNWLLRKIANIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P  T    +  FVF+ VL +V S    R +R    KTG+     
Sbjct: 157 LNAFDLAFVSNRGLYVPWPTYAPGSWPFVFALVLAVVASYALFRFNRQHQLKTGQFRRTW 216

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            ++  ++   P +  +     +H+D P L  FNF GG  + PE  +L +ALS YT++FIA
Sbjct: 217 PVAILMLLLFPFIAHLGFGAAMHWDIPELRGFNFRGGFVMIPELAALTLALSIYTSSFIA 276

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++RSG+ AVP GQ EAA +LGL +    R V++PQAMR IIPPLTSQYLN++KNSSLA 
Sbjct: 277 EVIRSGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAA 336

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I++ MN  N KIAL E+
Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISMLMNFYNRKIALVER 392


>gi|121588010|ref|ZP_01677762.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121547751|gb|EAX57842.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
          Length = 401

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            ++ +   + + + GI    VLS++AT   R     TG+  P+      L    P LV  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVTFPVLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L   +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA++LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +
Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTGQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|15641373|ref|NP_231005.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121728524|ref|ZP_01681547.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147675096|ref|YP_001216920.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153819351|ref|ZP_01972018.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|227081532|ref|YP_002810083.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505058|ref|ZP_04394568.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229511272|ref|ZP_04400751.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229518390|ref|ZP_04407834.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229608062|ref|YP_002878710.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254848483|ref|ZP_05237833.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255745748|ref|ZP_05419696.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262158974|ref|ZP_06030086.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262169333|ref|ZP_06037025.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|298498555|ref|ZP_07008362.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9655854|gb|AAF94519.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121629188|gb|EAX61628.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|126510096|gb|EAZ72690.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|146316979|gb|ABQ21518.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227009420|gb|ACP05632.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227013278|gb|ACP09488.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229345105|gb|EEO10079.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229351237|gb|EEO16178.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229357281|gb|EEO22198.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229370717|gb|ACQ61140.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254844188|gb|EET22602.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255736823|gb|EET92220.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262022146|gb|EEY40855.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|262029159|gb|EEY47811.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|297542888|gb|EFH78938.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 401

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 238/400 (59%), Gaps = 9/400 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLEQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            ++ +   + + + GI    VLS++AT   R     TG+  P+      L    P LV  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVTFPVLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L   +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA++LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +
Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTGQAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 362 NQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|153835220|ref|ZP_01987887.1| general L-amino acid transport system permease protein AapQ [Vibrio
           harveyi HY01]
 gi|148868286|gb|EDL67418.1| general L-amino acid transport system permease protein AapQ [Vibrio
           harveyi HY01]
          Length = 401

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 170/392 (43%), Positives = 239/392 (60%), Gaps = 1/392 (0%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
            T+++       +Y+    +   QII    L   F   +NN   N+E   ++ G GFL++
Sbjct: 10  STMSKPSGSKSLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLEARGIATGFGFLNQ 69

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF I   ++ Y    SY    +VG +NT  ++  G+I AT+IG ++G  RLS+N LV+
Sbjct: 70  EAGFGIGLTLIEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWLVS 129

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP   M+  
Sbjct: 130 RLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVMEAG 189

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +   + + ++GI+ S+     + +    TG+  P+  I   L+  LP +V       +  
Sbjct: 190 SSFVIAALIIGIIASILINVWANNKQRLTGQQTPMGRIVFGLVIVLPLVVYFLAGMPISL 249

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL 
Sbjct: 250 QYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 309

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
             K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE
Sbjct: 310 RTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 369

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 370 IIAMTMGVYLTLSLITSALMNVYNRKVALVER 401


>gi|330429591|gb|AEC20925.1| putative amino acid ABC transporter permease protein [Pusillimonas
           sp. T7-7]
          Length = 394

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 162/355 (45%), Positives = 223/355 (62%), Gaps = 1/355 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + V+N  +N+   N+S G  FL   AGF I + ++ YT   +Y  AI VG +NT  ++  
Sbjct: 41  YLVSNTLHNLAIRNISTGFDFLHREAGFAIGESVIDYTPADTYGRAIWVGILNTLRVSVV 100

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
           G+I AT+ GT++G  RLS N LV+ +   YVEV RNIP L+ +FF Y  +  V+P P  +
Sbjct: 101 GIIAATLFGTMLGIARLSKNWLVSRVASAYVEVMRNIPLLLQLFFWYAIITEVMPGPRSA 160

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +    G+F++NRGL  P L  D      V    L IV  +     ++   E TG   PL+
Sbjct: 161 LNPIPGVFISNRGLKMPALQGDA-LDWMVAGLGLAIVAIIVLGHWAKKRQEATGIIFPLV 219

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +  L+  LP    +     L  + PV+  FNF GG ++SPEF++L   L  YT+AF+A
Sbjct: 220 RAALGLLVVLPVAGWLISGASLSLEMPVMKGFNFSGGISLSPEFVALLTGLIIYTSAFVA 279

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VRSG+ +V RGQ EAA A+GL  R+  RLV+LPQA+R I+PP+TSQYLNL KNSSLAV
Sbjct: 280 EVVRSGIQSVNRGQWEAAEAIGLPRRRLLRLVILPQALRVIVPPMTSQYLNLTKNSSLAV 339

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AVG+ D+VSV  T +NQTGQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 340 AVGYPDIVSVVNTTLNQTGQAIEGILIIMAAYLTVSLSISIFMNWYNKRIALVER 394


>gi|92117598|ref|YP_577327.1| amino acid ABC transporter permease [Nitrobacter hamburgensis X14]
 gi|91800492|gb|ABE62867.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 401

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 166/397 (41%), Positives = 238/397 (59%), Gaps = 5/397 (1%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M    RK   + F +++     R     +++Q++    L  I    V N   N+E  +++
Sbjct: 1   MAAEPRKPPLQLFLKLRRALGGRAGWDGLALQVLFVAALAWIGYEIVANARGNLETQHVA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G  F+S  AGF + Q ++PY+   +Y    LVG +NT  +A  G+  ATIIG +V  GR
Sbjct: 61  SGFDFMSRTAGFGVSQSLIPYSETDTYTRVFLVGLLNTLLVAVVGIFFATIIGFIVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ +    FLNNRGL  
Sbjct: 121 LSPNWLISRISGGYVELVRNLPLLFQILFWYLAVLGALPSPRQSVSIFDSFFLNNRGLVI 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVL 237
           P           + + V  IV  L     SR    ++G+ + +  Y+ST L+ G+P  V+
Sbjct: 181 PKPIGHEGLVALMIAIVAAIVGCLLLRSYSRRALFQSGRVVIVWPYVSTLLV-GVPLAVM 239

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +       F+ PVL  FNF GG+ V+PEF++L IALS YTAAFIAE+VR+G+++V +GQM
Sbjct: 240 MIFGAPFTFEMPVLKGFNFSGGARVTPEFVALAIALSTYTAAFIAEVVRAGILSVHKGQM 299

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTI 356
           EA  +LGL+     RL+++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT 
Sbjct: 300 EAGASLGLSRGSTLRLIVVPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTT 359

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++QTGQAIEII I M +YL +S++ +  M+    ++A
Sbjct: 360 LSQTGQAIEIIAITMGVYLLISLVTSTIMSFYGWRLA 396


>gi|281180311|dbj|BAI56641.1| amino acid ABC transporter permease component [Escherichia coli
           SE15]
          Length = 399

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 226/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  +    I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRIF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+       +  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|144899135|emb|CAM75999.1| binding-protein-dependent transport system inner membrane component
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 394

 Score =  278 bits (710), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 155/380 (40%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +Y  R   I  Q+ +   +  +  + V+N   N+    ++ G GF+ + AGF+I +G++
Sbjct: 16  LVYSARFRGIVYQVAVVAGVLALGWYLVHNTLANLAARGIATGFGFMGQEAGFDIGEGLI 75

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y++  +Y  A++VG +NT  +A  G+  A+++G +VG  RLS N LVA +   YVE  R
Sbjct: 76  AYSAADTYLRALVVGVLNTLKVAVLGIALASLLGLVVGIARLSRNWLVARLATFYVETVR 135

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N+P L+ +F  Y  +++ LP P  ++ L  G+F++NRGL  P      +  + +      
Sbjct: 136 NVPLLLQLFVWY-GIVTALPGPRQALDLGLGVFISNRGLKVPVPEWHDSYWLAMLLLAAA 194

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            +      R + +   +TG+  P L +    +  LP L  +     L +  P L  FNF 
Sbjct: 195 FIGLFVLRRWAINRLYRTGRPFPWLSVGLAGLVVLPWLGFLLTGTPLVWSIPELKGFNFQ 254

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG+ +SPEF +L   L+ YTA+FIAEIVRSG++AVP GQ EAA++LGL+  K  RLV+LP
Sbjct: 255 GGADLSPEFAALLAGLTVYTASFIAEIVRSGILAVPHGQTEAALSLGLSRAKTLRLVVLP 314

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R I+PPLTSQYLNLLKNSSLAVA+G+ DLVSV  T INQTGQA+E + + M ++L +
Sbjct: 315 QALRVIVPPLTSQYLNLLKNSSLAVAIGYPDLVSVANTAINQTGQAVEGVALTMAVFLVI 374

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ ++L MN  NAK+AL  +
Sbjct: 375 SLALSLLMNWYNAKVALVSR 394


>gi|156974644|ref|YP_001445551.1| ABC transporter permease [Vibrio harveyi ATCC BAA-1116]
 gi|156526238|gb|ABU71324.1| hypothetical protein VIBHAR_02362 [Vibrio harveyi ATCC BAA-1116]
          Length = 390

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 169/382 (44%), Positives = 235/382 (61%), Gaps = 1/382 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
             +Y+    +   QII    L   F   +NN   N+E   ++ G GFL++ AGF I   +
Sbjct: 9   SLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLEARGIATGFGFLNQEAGFGIGLTL 68

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y    SY    +VG +NT  ++  G+I AT+IG ++G  RLS+N LV+ +  VY+E F
Sbjct: 69  IEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWLVSRLAAVYIETF 128

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP   M+  +   + + ++
Sbjct: 129 RNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVMEAGSSFVIAALII 188

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ S+     + +    TG+  P+  I   L+  LP +V       +    P L  FNF
Sbjct: 189 GIIASILINVWANNKQRLTGQQTPMGRIVFGLVIVLPLVVYFLAGMPISLQYPELKGFNF 248

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   K  +LV++
Sbjct: 249 RGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRTKTLKLVVI 308

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL
Sbjct: 309 PQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYL 368

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           +LS++ +  MN  N K+AL E+
Sbjct: 369 TLSLITSALMNVYNRKVALVER 390


>gi|326797352|ref|YP_004315172.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326548116|gb|ADZ93336.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 390

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 156/354 (44%), Positives = 223/354 (62%), Gaps = 4/354 (1%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +N+  N+E   +S G  FL+E AGF +   ++ YT   +Y  A  V  +NTF ++  G+I
Sbjct: 39  SNLQANLETRGISTGFSFLNEPAGFPVLIHLIEYTEADTYGRAFAVALINTFVISLLGII 98

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT+IG ++G  RLS N LVA +  VY+E  RNIP L+ +FF Y +VL+ +P P +SIV 
Sbjct: 99  LATVIGVIMGLARLSNNWLVARLATVYIETLRNIPLLLQMFFWYFAVLAAMPHPRNSIV- 157

Query: 166 PFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
            FG  F+N RG+  P       +   + +F+L IV + F  R ++   + TG   P  + 
Sbjct: 158 -FGDFFINKRGIYSPNPQFQDGSGFVLAAFLLSIVGAFFIVRWAKARQKATGNWFPAYWA 216

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S   I G+  L  +   + + FD P   +FN  GG  + PEF+++ IALS YT +FIAEI
Sbjct: 217 SFGTIIGVTLLAFVVTGFPVEFDLPSKSRFNVTGGMVLVPEFVAVLIALSTYTGSFIAEI 276

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+++V  GQ EA+ +LGL   K  RL++LPQA+R IIPPLTSQYLNL KNSSL  A+
Sbjct: 277 VRAGILSVNWGQTEASRSLGLPDGKTQRLIVLPQALRVIIPPLTSQYLNLAKNSSLGAAI 336

Query: 345 GFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + +LV+ V GT +NQTGQAIE I + M +Y SLS+ I+LFMN  N +++L E+
Sbjct: 337 AYPELVAVVMGTTLNQTGQAIETIGLCMLVYGSLSLSISLFMNWYNKRMSLVER 390


>gi|227325811|ref|ZP_03829835.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 407

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/369 (41%), Positives = 232/369 (62%), Gaps = 3/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q +L LL+     W   NV  N+   N++ G  FL   A FEI + ++ +T   SY  A+
Sbjct: 41  QCLLGLLIVAFSYWLYANVVENLRSQNIATGFSFLDHTAQFEIGEKLIAFTPRDSYLRAL 100

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            VG +NT ++   G++ AT++G  VG  R+S N L+A +   YVE+ RNIP ++ + F +
Sbjct: 101 GVGLLNTLYVTLCGIVLATLLGFSVGIARVSRNWLLARLAGGYVELMRNIPVILQVIF-W 159

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL-SLFATRLS 208
             V+  LP P  +I L    FL NRGLSF ++    +  ++  S +L  VL SL   R++
Sbjct: 160 SVVIRNLPSPRDAIELGSLGFLTNRGLSF-SVPAAHHGWMWTGSALLAAVLISLILKRVA 218

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R+  E  G++LP   ++   I GLP LV          D+P+L  FNF GG TVSPEF +
Sbjct: 219 RYMRENVGRSLPTGRLTLAAIIGLPLLVWWLSGAPAELDRPILRGFNFRGGFTVSPEFTA 278

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL  +     R +++PQAMR I+PPLT
Sbjct: 279 LLLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIVPPLT 338

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           SQY++L KNSS+AV VG+ +L ++  T++NQTGQA+E+I I M +YL++SI+ +L MN  
Sbjct: 339 SQYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVSIVTSLLMNLF 398

Query: 389 NAKIALKEK 397
           N  +A+KE+
Sbjct: 399 NRVVAIKER 407


>gi|323966447|gb|EGB61881.1| inner membrane transport system [Escherichia coli M863]
 gi|327251363|gb|EGE63052.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli STEC_7v]
          Length = 393

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 155/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +S+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAISVGIFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      ++  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|293412638|ref|ZP_06655361.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291469409|gb|EFF11900.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 393

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 155/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +S+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAISVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      ++  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|300937396|ref|ZP_07152231.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300457570|gb|EFK21063.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 399

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+     ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFLFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|218702041|ref|YP_002409670.1| amino-acid ABC transporter membrane protein [Escherichia coli
           IAI39]
 gi|218372027|emb|CAR19885.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
          Length = 393

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+     ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFLFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|331684910|ref|ZP_08385502.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H299]
 gi|331078525|gb|EGI49731.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H299]
          Length = 393

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 152/356 (42%), Positives = 221/356 (62%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    +VG +NT  ++  
Sbjct: 38  WLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSAL 97

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 98  CIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPRPRQA 157

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      FL+NRGL  P+  +      F+ + V+ I +S+   R ++ +  KTG+     
Sbjct: 158 VSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAISVGLFRFNKTYQIKTGQLRRTW 217

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            ++  LI GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIA
Sbjct: 218 PVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIA 277

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTSQYLN++KNSSLA 
Sbjct: 278 EIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAA 337

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  N +IA+ E+
Sbjct: 338 AIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER 393


>gi|253690350|ref|YP_003019540.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756928|gb|ACT15004.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 407

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 149/368 (40%), Positives = 228/368 (61%), Gaps = 1/368 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q +L LL+     W   NV  N+   N++ G GFL   A FEI + ++ +T   SY  A+
Sbjct: 41  QCLLGLLIVAFSYWLYANVVENLRSQNIATGFGFLDHTAQFEIGEKLIAFTPRDSYLRAL 100

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            VG +NT ++   G++ AT++G  VG  R+S N L+A +   Y+E+ RNIP ++ + F +
Sbjct: 101 GVGLLNTLYITLCGIVLATLLGFSVGIARVSRNWLLARLAGGYIEMMRNIPVILQVIF-W 159

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             V+  LP P  +I L    FL NRGLSF              + +  +++SL   R++R
Sbjct: 160 SVVIRNLPSPRDAIELGNLGFLTNRGLSFAVPAAHHGWLWTGIALLAAVLISLILNRVAR 219

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           +  E  G++LP   ++   + GLP LV          D+P+L  FNF GG TVSPEF +L
Sbjct: 220 YVRESRGRSLPTGRLTLAALIGLPLLVWWLSGAPAELDRPILRGFNFRGGFTVSPEFTAL 279

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL  +     R +++PQAMR I+PPLTS
Sbjct: 280 LLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIVPPLTS 339

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           QY++L KNSS+AV VG+ +L ++  T++NQTGQA+E+I I M +YL++SI+ +L MN  N
Sbjct: 340 QYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVSIVTSLLMNLFN 399

Query: 390 AKIALKEK 397
             +A+KE+
Sbjct: 400 RVVAIKER 407


>gi|330975707|gb|EGH75773.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 393

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 156/380 (41%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLASLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL K SSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKKSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|316934241|ref|YP_004109223.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris DX-1]
 gi|315601955|gb|ADU44490.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris DX-1]
          Length = 401

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 155/389 (39%), Positives = 236/389 (60%), Gaps = 3/389 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M  +AR    ++ ++++     R     +  Q++   +L  I    V+N  +N+    ++
Sbjct: 1   MAIDARPPPPQFVAKLRRALGGRSGWKGLIAQVLFVAVLCWIGYEIVDNARDNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY    SY    LVG VNT  ++  G++ AT+IG +V  GR
Sbjct: 61  SGFGFMSQTAGFGVSQTLIPYQESDSYTRVFLVGLVNTLLVSAVGIVIATVIGFMVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ L    FL+NRG+  
Sbjct: 121 LSPNWLISRIAGGYVEIVRNLPLLFQILFWYLAVLGTLPAPRQSVSLLDSFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ + ++ +  ++     +R     TGK + +  +   L+ GLP + + 
Sbjct: 181 PRPVGEAGLDGFLVAVLIAVTAAIALPLYARRRLFATGKPMRVWPVVIGLLIGLPLVAVA 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ PVL  FNF GGS + PEF++L +ALS YTAAFIAE+VR+G+++V +GQME
Sbjct: 241 IFGRPFSFEVPVLRGFNFAGGSRLPPEFVALTLALSTYTAAFIAEVVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+  +  RL+++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGQTLRLIVIPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +QTGQAIE+I I M +YL +S++ +  M+
Sbjct: 361 SQTGQAIEVIAITMGVYLLISLVTSALMS 389


>gi|320202179|gb|EFW76754.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli EC4100B]
          Length = 393

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GL  L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLHLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|331674784|ref|ZP_08375543.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA280]
 gi|331068223|gb|EGI39619.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA280]
          Length = 399

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 152/356 (42%), Positives = 221/356 (62%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    +VG +NT  ++  
Sbjct: 44  WLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSAL 103

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 104 CIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQA 163

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      FL+NRGL  P+  +      F+ + V+ I +S+   R ++ +  KTG+     
Sbjct: 164 VSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAISVGLFRFNKTYQIKTGQLRRTW 223

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            ++  LI GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIA
Sbjct: 224 PVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIA 283

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTSQYLN++KNSSLA 
Sbjct: 284 EIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAA 343

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  N +IA+ E+
Sbjct: 344 AIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER 399


>gi|323979011|gb|EGB74089.1| inner membrane transport system [Escherichia coli TW10509]
          Length = 393

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/369 (41%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +S+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAISVGIFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      ++  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R +++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQIIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|301022228|ref|ZP_07186143.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300397641|gb|EFJ81179.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 399

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 155/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYRRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +S+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAISVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      ++  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 390

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 391 NRRIAIVER 399


>gi|324115127|gb|EGC09091.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 393

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/369 (41%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +S+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAISVGIFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      ++  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R +++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQIIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIIER 393


>gi|325498847|gb|EGC96706.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ECD227]
          Length = 393

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/369 (42%), Positives = 225/369 (60%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIIQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I LS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFLAFILAVVMAIALSVGLYRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+       +  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 KHQIKTGQLRRTWPFAVGLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TMALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|218550553|ref|YP_002384344.1| amino-acid ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
 gi|218358094|emb|CAQ90740.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 393

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 156/369 (42%), Positives = 225/369 (60%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIIQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I LS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFLAFILAVVMAIALSVGLYRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+       +  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 KHQIKTGQLRRTWPFAVGLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TMALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|304396996|ref|ZP_07378876.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355792|gb|EFM20159.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 392

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 163/395 (41%), Positives = 237/395 (60%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV R FS      +  V     Q+I  + +  +  + V+N   N++   ++ G GF
Sbjct: 2   SQRPTVKRDFS----FGNPTVRAWIYQLIAVVAVLGVVGYLVHNTIINLDNRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ YT   +YA   LVG  NT  ++   ++ A+I+G  VG  RLS N 
Sbjct: 58  LERTAGFGIVQHLIEYTEGDTYARVFLVGLTNTLLVSALCIVFASILGFAVGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      +++NRGL  P  T 
Sbjct: 118 LLRKLSNIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAYVSNRGLYVPWPTY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              +  FV + +L + +S    R +R    KTG+       +  ++   P L  +     
Sbjct: 178 APGSWPFVIALLLAVAVSYALYRFNRQHQLKTGELRRTWPAAVGMLILFPLLAHLGFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GGS + PE  +L +ALS YT++FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDVPQLRGFNFRGGSVMIPELAALTLALSIYTSSFIAEVIRSGIQSVPHGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  G+++NQTGQ
Sbjct: 298 GLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGSVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S++I++ MN  N KIAL E+
Sbjct: 358 AIETIAITMGVYLIISLLISMLMNFYNRKIALVER 392


>gi|291619132|ref|YP_003521874.1| YhdX [Pantoea ananatis LMG 20103]
 gi|291154162|gb|ADD78746.1| YhdX [Pantoea ananatis LMG 20103]
          Length = 392

 Score =  276 bits (706), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 155/356 (43%), Positives = 221/356 (62%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+    ++ G GFL   AGF I Q ++ YT   +YA   LVG  NT  ++  
Sbjct: 37  YLIHNTVINLANRGITSGFGFLERNAGFGIVQHLIDYTEGDTYARVFLVGLTNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  +G  RLS N L+  I  +Y+E FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CIVFASVLGFFIGLARLSDNWLLRKIANIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P  T    +  FV + VL +V S    R +R    KTG+     
Sbjct: 157 LNAFDLAFVSNRGLYVPWPTYAPGSWPFVIALVLAVVASYALFRFNRQHQLKTGQFRRTW 216

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            ++  ++   P +  +     +H+D P L  FNF GG  + PE  +L +ALS YT++FIA
Sbjct: 217 PVAILMLLLFPFIAHLGFGAAMHWDIPELRGFNFRGGFVMIPELAALTLALSIYTSSFIA 276

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++RSG+ AVP GQ EAA +LGL +    R V++PQAMR IIPPLTSQYLN++KNSSLA 
Sbjct: 277 EVIRSGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAA 336

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I++ MN  N KIAL E+
Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISMLMNFYNRKIALVER 392


>gi|312959111|ref|ZP_07773630.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311286881|gb|EFQ65443.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 393

 Score =  276 bits (705), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 163/378 (43%), Positives = 228/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D +V     QII  + +  +  +  NN   N++   ++ G  FL   AGF I Q ++ YT
Sbjct: 16  DPKVRAWLFQIITIVAVVSLGWYLFNNTQTNLQHRGITSGFDFLERSAGFGIAQHLIDYT 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              SYA   ++G +NT  + F G+I AT++G +VG  RLS N ++  +  VYVEVFRNIP
Sbjct: 76  ESDSYARVFVIGLLNTLLVTFIGVILATLLGFIVGVARLSPNWMINKLATVYVEVFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ I F Y +V   +P P +S       F+++RGL+ P          FV S V+ IV 
Sbjct: 136 PLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAMAADGFWPFVASIVVAIVA 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +  TR +    E TG      +    L   +P L  +     LH++ P L  FNF+GG 
Sbjct: 196 IVLMTRWANKRFEATGVPFHKFWAGLALFIVIPALCALIFGVPLHWEMPKLQGFNFVGGW 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++SI
Sbjct: 316 RVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISI 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IAL E+
Sbjct: 376 SISLLMNWYNKRIALIER 393


>gi|330969253|gb|EGH69319.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 393

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 155/380 (40%), Positives = 231/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P          F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGTWAFLISLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +      TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFGATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|293605349|ref|ZP_06687734.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816288|gb|EFF75384.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 380

 Score =  275 bits (704), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 169/367 (46%), Positives = 228/367 (62%), Gaps = 2/367 (0%)

Query: 32  ILALLLTVIFLW-CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           +LAL L     W  V+N  +N+   N++ G GFL+  AGF I + ++ Y    +Y  AI 
Sbjct: 15  VLALTLVGASTWFLVHNTLHNLSMRNIATGFGFLNREAGFAIGESVIAYGPADTYGRAIF 74

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG +NT  +    ++ AT++G L+G GRLS N LV  I  VYVEV RN+P L+ +FF Y 
Sbjct: 75  VGVLNTLRVGLLALVAATLLGVLIGIGRLSKNWLVKKITSVYVEVMRNVPLLLQLFFWYA 134

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
            +   +P P  +     G+F++NRGL  P L    +    +    L IV  L        
Sbjct: 135 LITENMPGPRQAHNPLPGVFISNRGLKVPGLE-GASLDWMLGGLALAIVAILLLGHWGAK 193

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
             E TG+  PL   +  L+  LP L  +A    L  D P L  FNF+GG T++PEF++L+
Sbjct: 194 RQEATGRVFPLGRWAIGLLLALPALGWLASGASLTLDMPQLRGFNFVGGLTLTPEFVALF 253

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YT+AFIAE+VRSG+ AV  GQ EAA +LGL   K  RLV+LPQA+R IIPP+TSQ
Sbjct: 254 LGLTVYTSAFIAEVVRSGIQAVNNGQWEAAGSLGLPRAKVLRLVVLPQALRVIIPPMTSQ 313

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           YLNLLKNSSLAVA+G+ D+VSV  T +NQTGQAIE ILI M  YL++S+ I++FMN  N 
Sbjct: 314 YLNLLKNSSLAVAIGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLSISIFMNWYNK 373

Query: 391 KIALKEK 397
           +IAL E+
Sbjct: 374 RIALVER 380


>gi|319957435|ref|YP_004168698.1| amino acid ABC transporter membrane protein 1, paat family
           [Nitratifractor salsuginis DSM 16511]
 gi|319419839|gb|ADV46949.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Nitratifractor salsuginis DSM 16511]
          Length = 384

 Score =  275 bits (704), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 158/391 (40%), Positives = 231/391 (59%), Gaps = 21/391 (5%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           FL D ++  I  QII   L      +   N  +N+E+  +  G  FL + AGF+I +  +
Sbjct: 4   FLRDEKIRGILYQIIAITLFVGFLFYIAQNTAHNIEQRGIKTGFAFLHDTAGFDITESPI 63

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+T  S++     VG +NT  ++F G++ +++IG L+G  RLS N L+  I   Y+E FR
Sbjct: 64  PFTPASTHLKVFEVGLLNTLIVSFWGIVFSSLIGLLIGIWRLSPNWLINRIAAAYIETFR 123

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NIP L+ I F Y  VL+ LP   HS+     +F+NNRG   P L     A +   + V  
Sbjct: 124 NIPVLLQILFWYNVVLATLPSTRHSLNFFNAVFINNRGFFMPKLVFQDGAWMIGAAIVAA 183

Query: 198 IVLSLFATRLSRHFHEKTGKALPLL----------YISTFLIFGLPTLVLIALKYQLHFD 247
           I+  +F  R ++   E+TG+  P+            +  +LI G P   +          
Sbjct: 184 IIGIIFVHRWAKKRQEETGEQFPVFLTGIILLIGLPLLAYLIAGRPVTAVY--------- 234

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L  FNF GG T +PEF++L  ALS YTA FIAE +RSG+ AVP+GQ EAA +LGL+ 
Sbjct: 235 -PELHGFNFRGGKTFTPEFLALLFALSIYTATFIAEAIRSGIEAVPKGQKEAATSLGLSP 293

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEI 366
            +  RLV+LPQA+R  IP + +QYLNL+KNSSLA A+G+ +LV++  GT +NQTGQA+EI
Sbjct: 294 LQQLRLVILPQAVRIAIPSIINQYLNLIKNSSLAAAIGYPELVTIFAGTSLNQTGQALEI 353

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +LI M  YL +S++++L +N  NAK+ +KE+
Sbjct: 354 LLITMLTYLLISLIVSLILNWFNAKMKIKER 384


>gi|331015251|gb|EGH95307.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 393

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 156/381 (40%), Positives = 236/381 (61%), Gaps = 3/381 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           L D +V     QII  +++ + F W + +N   N++   ++ G GFL   AGF I Q ++
Sbjct: 14  LSDPKVRAWLFQII-TVVVVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLI 72

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y+   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFR
Sbjct: 73  DYSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFR 132

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NIPPL+ I F Y +V   LP P  +       ++++RGL+ P       A  F+ S V+ 
Sbjct: 133 NIPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVA 192

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF 
Sbjct: 193 VIAVVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFT 252

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++P
Sbjct: 253 GGWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIP 312

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL+
Sbjct: 313 QALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLA 372

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +SI I++ MN  N +IAL E+
Sbjct: 373 ISISISMLMNWYNKRIALIER 393


>gi|86750028|ref|YP_486524.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris HaA2]
 gi|86573056|gb|ABD07613.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris HaA2]
          Length = 401

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 157/395 (39%), Positives = 239/395 (60%), Gaps = 3/395 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M  +AR   +++ +R++     R     +  Q++   +L  I    V+N  +N+    ++
Sbjct: 1   MAIDARPPPSQFGARLRRALGGRSGWKGLIAQLLFVAVLCWIGYAIVDNARDNLTNQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY    SY    LVG VNT  ++  G+  AT++G LV  GR
Sbjct: 61  SGFGFMSQTAGFGVSQTLIPYAESDSYTRVFLVGLVNTLVVSVIGIFFATLLGFLVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L+A I   YVE+ RN+P L  I F Y +VL  LP P  S+ +    FL+NRG+  
Sbjct: 121 LSPNWLIARIAGGYVELIRNLPLLFQILFWYLAVLGALPGPRQSVSVFDSFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ + ++ ++ ++     +R     TGK + +   S  L+ GLP + ++
Sbjct: 181 PRPVGEAGLDGFLVALLIAVIAAIVLPIYARRRLFDTGKPMKVWPWSVGLLIGLPLIAVL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ P L  FNF GG+ ++PEF++L +AL+ YTA FIAEIVR+G+++V +GQME
Sbjct: 241 IFGRPFGFEIPALKGFNFAGGARIAPEFVALTLALATYTAGFIAEIVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RLV++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGATLRLVVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +QTGQAIE+I I M +YL +S++ +  M+  + +I
Sbjct: 361 SQTGQAIEVIAITMGVYLLISLITSALMSLYSWRI 395


>gi|306816387|ref|ZP_07450519.1| putative amino-acid transporter subunit [Escherichia coli NC101]
 gi|222034985|emb|CAP77728.1| amino-acid ABC transporter permease protein [Escherichia coli LF82]
 gi|305849952|gb|EFM50411.1| putative amino-acid transporter subunit [Escherichia coli NC101]
 gi|312947827|gb|ADR28654.1| predicted amino-acid transporter subunit [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 393

 Score =  275 bits (703), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 156/369 (42%), Positives = 226/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+       +  LI GLP L        L +D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALLWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|75675720|ref|YP_318141.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           winogradskyi Nb-255]
 gi|74420590|gb|ABA04789.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 401

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/396 (41%), Positives = 241/396 (60%), Gaps = 3/396 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   +RK   ++  R++     R     +++Q++   +L  I    V N   N+E  N +
Sbjct: 1   MATRSRKPPLQFSLRLRRALGGRAGWSGLALQVLFVAILAWIGYEIVANARGNLEAQNTA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G+GF+S  AGF + Q ++PY+   SY    LVG VNT  +A  G+  AT+IG +V  GR
Sbjct: 61  SGLGFMSNTAGFGVSQTLIPYSQTDSYTRVFLVGLVNTLVVAAVGIFFATVIGFMVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL +LP P  SI +  G+FL+NRGL+ 
Sbjct: 121 LSPNWLISRISGGYVELVRNLPLLFQILFWYLAVLRMLPSPKQSISILDGVFLSNRGLAI 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P          F  +  + I+  +     SR    +TG+AL +   +  L+  LP + + 
Sbjct: 181 PRPVGQEGLIAFAVAIAVAIIGCMVLRSHSRRSLFRTGRALVVWPYALGLLIFLPAVAIA 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ PVL  FNF GG+ + PEF++L IALS YTAAFIAE+VR+G+++V +GQME
Sbjct: 241 VFGIPFTFEMPVLKGFNFSGGARLIPEFVALAIALSTYTAAFIAEVVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  ALGL+     RL+++PQAMR ++PPLT+QYLNL KNSSLAVA+G+ +L SV  GT +
Sbjct: 301 AGAALGLSRGSTLRLIVVPQAMRVVLPPLTNQYLNLTKNSSLAVAIGYPELFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +QTGQAIEI+ I M +YL +S++ +  M+  + ++A
Sbjct: 361 SQTGQAIEILAITMGVYLLISLVTSGIMSIYSRRVA 396


>gi|213967085|ref|ZP_03395234.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301386369|ref|ZP_07234787.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302133059|ref|ZP_07259049.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213927927|gb|EEB61473.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 393

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 156/381 (40%), Positives = 235/381 (61%), Gaps = 3/381 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           L D +V     QII  ++  + F W + +N   N++   ++ G GFL   AGF I Q ++
Sbjct: 14  LSDPKVRAWLFQII-TVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLI 72

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y+   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFR
Sbjct: 73  DYSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFR 132

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NIPPL+ I F Y +V   LP P  +       ++++RGL+ P       A  F+ S V+ 
Sbjct: 133 NIPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVA 192

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF 
Sbjct: 193 VIAVVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFT 252

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++P
Sbjct: 253 GGWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIP 312

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL+
Sbjct: 313 QALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLA 372

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +SI I++ MN  N +IAL E+
Sbjct: 373 ISISISMLMNWYNKRIALIER 393


>gi|28868467|ref|NP_791086.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851705|gb|AAO54781.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 393

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 156/381 (40%), Positives = 235/381 (61%), Gaps = 3/381 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           L D +V     QII  ++  + F W + +N   N++   ++ G GFL   AGF I Q ++
Sbjct: 14  LSDPKVRAWLFQII-TVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLI 72

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y+   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFR
Sbjct: 73  DYSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFR 132

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NIPPL+ I F Y +V   LP P  +       ++++RGL+ P       A  F+ S V+ 
Sbjct: 133 NIPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVA 192

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF 
Sbjct: 193 VIAVVMMVRWANKRFEATGQPFHKFWVGLALLLSIPGLSMLIFGSPVHWELPQLKGFNFT 252

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++P
Sbjct: 253 GGWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIP 312

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL+
Sbjct: 313 QALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLA 372

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +SI I++ MN  N +IAL E+
Sbjct: 373 ISISISMLMNWYNKRIALIER 393


>gi|27379558|ref|NP_771087.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27352710|dbj|BAC49712.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 401

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 158/363 (43%), Positives = 231/363 (63%), Gaps = 1/363 (0%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
           + ++VQ   A +L  I    V+N   N+E  +++ G GFL   AGF+++Q ++ YT   +
Sbjct: 27  NGVAVQFAFAAILGWIGYEIVSNARANLENQHIAAGFGFLRNNAGFDVNQTLISYTGSDT 86

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    +VG +NT  ++  G+  AT+IG +V   RLS N L++ I  +YVE+ RN+P L  
Sbjct: 87  FLRVFIVGLLNTLVVSVVGIFFATVIGFIVALCRLSPNWLLSRIGELYVEIIRNLPLLFQ 146

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I F Y +VL+ LP P  SI L    F++NRGL  P    ++  + F+   VLGIV SL  
Sbjct: 147 ILFWYLAVLAALPNPRQSISLLGIAFVSNRGLVIPRPIGESGFEPFLAMLVLGIVASLAL 206

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
              +R    + G+ + +      L+FGLP + ++       F+ P L  FNF GGS + P
Sbjct: 207 RFHARRALFQRGQVIRIWPYVLGLLFGLPVVTMLVFGLPFTFELPQLKGFNFAGGSRIIP 266

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++L +ALS YTAAFIAEIVR+G+++V +GQMEA  +LGL+     RL+++PQAMR I+
Sbjct: 267 EFVALTVALSTYTAAFIAEIVRAGILSVHKGQMEAGSSLGLSRGTTLRLIVVPQAMRVIV 326

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           PPLT+QYLNL KNSSLAVA+G+ DLVSV  GT ++QTGQAIEII + M +YL +S++ + 
Sbjct: 327 PPLTNQYLNLTKNSSLAVAIGYPDLVSVFAGTSLSQTGQAIEIIAMTMGVYLLISLVTSA 386

Query: 384 FMN 386
            M+
Sbjct: 387 VMS 389


>gi|77462292|ref|YP_351796.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Rhodobacter sphaeroides 2.4.1]
 gi|126461168|ref|YP_001042282.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|221638146|ref|YP_002524408.1| Polar amino acid ABC transporter inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|77386710|gb|ABA77895.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Rhodobacter sphaeroides 2.4.1]
 gi|126102832|gb|ABN75510.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|221158927|gb|ACL99906.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 420

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 169/405 (41%), Positives = 234/405 (57%), Gaps = 28/405 (6%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           LYD R  ++++Q+ +  L      W V+N   N+E        GFL  RAG++I Q +V 
Sbjct: 18  LYDTRYRSLTIQVFVFFLFMAGAAWLVDNTMRNLEALGKDFDFGFLWNRAGYDISQRLVD 77

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT+DS++  A+LVG +NT  +A  G + AT+IG LVG  RLS N +V  +  VYVEVFRN
Sbjct: 78  YTNDSTHGRAMLVGLLNTLLIALLGCMAATVIGVLVGVLRLSRNWIVGRLMTVYVEVFRN 137

Query: 139 IPPLVVIFFLYKSVLSVLPIPD------HSIVLPFGMFLN-----NRGLSFPTLTMDTN- 186
           +P L+ I  +Y       P P+       + +    MFL+     NR  + P        
Sbjct: 138 VPLLLWILLIYAVFSEATPAPNAFRPNPETGIADRSMFLDAIAVTNRYTALPNPVFSREL 197

Query: 187 ---------AKIFVFSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFLIFGLP 233
                      + V + +  I+   F  R     +    E TG+     + S  L+ GLP
Sbjct: 198 GWLDLGLFYVNMDVLAVIGAIIAGWFINRSVKARATRIQEATGERPATWWSSLLLLVGLP 257

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             VL+AL + L F  P L  FNF+GG  VS  FM+L++ALS YT AFIAEIVR G++AV 
Sbjct: 258 VAVLLALGFHLEF--PELRGFNFVGGLNVSNSFMALWLALSLYTGAFIAEIVRGGILAVS 315

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SV 352
           RGQ EAA ALGL   +   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ DL  ++
Sbjct: 316 RGQSEAAFALGLRPGRTMNLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYLDLRGTL 375

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GG  +NQTG+ +E +L+ M IYL++S++I+  MN  N+ + LKE+
Sbjct: 376 GGITLNQTGRELECVLLMMLIYLAISLVISGVMNVYNSAVKLKER 420


>gi|170743937|ref|YP_001772592.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168198211|gb|ACA20158.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 400

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 167/389 (42%), Positives = 241/389 (61%), Gaps = 6/389 (1%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           R+  L D +V   + QI+L L + ++    ++N   N+  + ++ G GFL   AGF++ Q
Sbjct: 12  RVSPLNDPKVRGAAYQILLLLGIGLVAWMAISNAAENLRNARIASGFGFLGNTAGFDVSQ 71

Query: 75  GIVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
            +VP+ +  S+Y  A +VG +NT  +A  G+  AT++G L+G  RLS N ++A +  VYV
Sbjct: 72  ALVPFAAATSTYGAAFVVGLLNTLLVAVIGIAVATVLGFLIGVARLSPNWMLAKLATVYV 131

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV RNIP L+ + F Y +VL+ LP    S+  P  +FLN RGL  P   +  +A     +
Sbjct: 132 EVVRNIPLLLQLLFWYVAVLAALPGARDSLAFPGSVFLNQRGLYVPKPILAADAWAIPAA 191

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFDKP 249
           F +G+  +L     +R    +TG+  P+  +   L+ GLP L    L       +  + P
Sbjct: 192 FGIGVAAALAYRFRARREQARTGRQAPVGLVGLALVLGLPLLAWAGLALAGLSPVTVELP 251

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V G FN  GG  + PEF++L + LS YTAAFIAE+VRSG+ AV +GQ EAA ALGL    
Sbjct: 252 VKGTFNLRGGLQLFPEFVALVLGLSIYTAAFIAEVVRSGIQAVAKGQTEAARALGLRPGP 311

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIIL 368
             RLV++PQAMR I+PPLTSQYLNL KNSSLAVA+G+ DLV V  GT++NQTGQA+E++ 
Sbjct: 312 TLRLVVIPQAMRVIVPPLTSQYLNLTKNSSLAVAIGYPDLVQVFMGTVLNQTGQAVEVVA 371

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I M +YL++S++ A  MN  N ++AL E+
Sbjct: 372 ITMAVYLTISLVTATGMNLYNRRVALIER 400


>gi|83592339|ref|YP_426091.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575253|gb|ABC21804.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 398

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 173/385 (44%), Positives = 232/385 (60%), Gaps = 3/385 (0%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEID 73
           R   L D RV  I+ Q+ L +   V F W + +N   NM    ++ G  FL   AGF I 
Sbjct: 15  RPHPLRDPRVRAIAFQV-LTIAALVWFFWAIFDNTLTNMRTRGITTGFAFLDHSAGFGIL 73

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++PY    SY    +VG +NT  ++  G+I AT+IG +VG  RLS N L+A +  +YV
Sbjct: 74  MSLIPYDETYSYGRTFVVGLLNTLLVSGLGVIAATLIGFVVGVARLSRNWLIAKLALIYV 133

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E  RNIP L+ IFF Y +VL  LP P  S+ L    FLNNRG   P+        +   +
Sbjct: 134 ETLRNIPLLLQIFFWYFAVLRPLPQPRQSLELGALFFLNNRGFYMPSPIAGDGMALVGLA 193

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            V+ + L+L   R +      TG   P       L+ GLP L  +AL   + FD P L  
Sbjct: 194 LVVALALALAIGRWATRRRMATGLGFPSWRTGLALVLGLPLLAFLALGTPVTFDVPHLQG 253

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF+GGS + PE ++L +ALS YTAAFIAEIVRSG++AV  GQ EAA +LGL      RL
Sbjct: 254 FNFVGGSRLIPEMVALLLALSMYTAAFIAEIVRSGILAVSHGQTEAAHSLGLKPTATLRL 313

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           ++LPQA+R +IPP TSQYLNL+KNSSLA A+G+ DLVSV  GT +NQTGQA+EI+ + M 
Sbjct: 314 IVLPQALRVMIPPTTSQYLNLIKNSSLATAIGYPDLVSVFMGTTLNQTGQAVEIVGMTMA 373

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL +S++++  MN  N  +ALKE+
Sbjct: 374 VYLLISLVVSGLMNWYNRAVALKER 398


>gi|70728431|ref|YP_258180.1| general amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68342730|gb|AAY90336.1| general amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 393

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QII  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++ 
Sbjct: 14  LSDPRVRAWLFQIITLVAVVSLGWFLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLIA 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   SYA   ++G +NT  + F G+I AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTEADSYARVFVIGLLNTLLVTFIGVILATLLGFIIGVARLSPNWIISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   +P P +S       F+++RGL+ P   M      FV S VL I
Sbjct: 134 IPPLLQILFWYFAVFLTMPGPRNSHNFGDMFFVSSRGLNMPAAQMAPGFWAFVASLVLAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R +    E TG      +    L+  +P L  +     +H++ P L  FNF+G
Sbjct: 194 GAIALMCRWANRRFEATGVPFHKFWSGLGLLLVIPALCTLIFGSPVHWEMPKLAGFNFVG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL +    R V++PQ
Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|152998389|ref|YP_001343224.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150839313|gb|ABR73289.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 391

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 162/386 (41%), Positives = 232/386 (60%), Gaps = 4/386 (1%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S   FL D     +  QI+L  ++     +  +N+  N++   +S G  F +E AGF I 
Sbjct: 8   SNNSFLNDAGNRALIFQILLLAMVVFAGYYLFSNLQANLDNRGISTGFSFFNEPAGFPIL 67

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ YT  ++Y  A +V  +NTF ++  G+I ATIIG ++G  RLS N LVA +  VY+
Sbjct: 68  IHLIEYTEANTYGRAFVVALINTFVISLLGIILATIIGVIMGLARLSKNWLVARLATVYI 127

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL-NNRGLSFPTLTMDTNAKIFVF 192
           E  RNIP L+ +FF Y +VL+ LP P  S    F  FL N RG+  P   +     + +F
Sbjct: 128 ETLRNIPLLLQMFFWYFAVLAALPAPRDS--YEFADFLLNKRGIYSPNPLIQDGFGLVIF 185

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F+L IV S+     ++    +TG   P  + S  +I G+  + L    + + FD P   
Sbjct: 186 GFILSIVASIGVIIWAKKRQTRTGLWFPAYWTSLGVIVGITFIFLAMAGFPIEFDLPQKS 245

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +FN  GG  + PEF+++ +ALS YT AFIAEIVR+G+++V  GQ EAA +LGL      R
Sbjct: 246 RFNVTGGMVLPPEFVAVLVALSTYTGAFIAEIVRAGILSVNWGQTEAARSLGLRDSMTQR 305

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWM 371
           L++LPQA+R IIPPLTSQYLNL KNSSL  A+ + +LV+ V GT +NQTGQAIE I + M
Sbjct: 306 LIVLPQALRVIIPPLTSQYLNLAKNSSLGAAIAYPELVAVVMGTTLNQTGQAIETIGLCM 365

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            +Y SLS+ I++FMN  N K++L E+
Sbjct: 366 LVYGSLSLSISVFMNWYNNKMSLIER 391


>gi|261213749|ref|ZP_05928030.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915356|gb|EEX82217.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
          Length = 372

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 142/308 (46%), Positives = 195/308 (63%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q ++ 
Sbjct: 19  LYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTLIQ 78

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVFRN
Sbjct: 79  YNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVFRN 138

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++GI
Sbjct: 139 IPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLIGI 198

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           + S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG FN  G
Sbjct: 199 LASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNLTG 258

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  RL+++PQ
Sbjct: 259 GAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQ 318

Query: 319 AMRSIIPP 326
           A+R IIPP
Sbjct: 319 ALRIIIPP 326


>gi|242280379|ref|YP_002992508.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123273|gb|ACS80969.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 459

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 149/322 (46%), Positives = 206/322 (63%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  YT  SSY  A+L G  NT  +   G + +TI+G LV  GRLS N L++ ICR YVE+
Sbjct: 138 IAHYTESSSYFMALLTGLGNTLKVTVIGCVASTILGLLVALGRLSPNWLLSNICRWYVEL 197

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN+P L+ +FF Y  VL  LP    SI L   + LN RGL  P L     A IF  + V
Sbjct: 198 NRNLPVLLQLFFWYFIVLQQLPNVRKSIDLGGWLILNKRGLYMPALVPQQGAWIFCAAVV 257

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G        R ++   ++TGK++  L+ S  ++ GLP +  +        D PVL  FN
Sbjct: 258 VGFAAIWIIRRRAKRILDETGKSVKTLFPSLAVLIGLPAVAWLLGGQPFTLDFPVLKGFN 317

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG+ ++PEF +L + L+ Y +AF AEI+RSG+ AV +GQ EAA AL +  R+  R+V+
Sbjct: 318 FKGGTGLTPEFTALVVGLTVYVSAFNAEIIRSGIEAVSKGQREAARALAMNERQVMRIVI 377

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR I+PP+TS+YL + KNSSLAVA+G+ + VSVGGTI+NQ+GQA+EI+ IWM +YL
Sbjct: 378 LPQAMRIIVPPMTSEYLAIAKNSSLAVAIGYPEFVSVGGTILNQSGQAVEIVGIWMGVYL 437

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            +S+ I+  MN  N+K+AL E+
Sbjct: 438 CISLFISFGMNIYNSKVALVER 459


>gi|170720091|ref|YP_001747779.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169758094|gb|ACA71410.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 392

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 164/380 (43%), Positives = 230/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LSDPRVRAWLFQILTIIFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI      F++NRGL+ P  TM      FV + VL I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINFDDAFFISNRGLNMPGATMAEGFWPFVAAVVLAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +   R +     +TG+     +    L+  +P L  +     +H++ P L  FNF+G
Sbjct: 193 VAIMAMVRYANKRFNETGEPFHKFWAGLALLVVIPGLCALLFGSPVHWEVPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|330873114|gb|EGH07263.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330963202|gb|EGH63462.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 393

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 157/381 (41%), Positives = 234/381 (61%), Gaps = 3/381 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           L D +V     QII  ++  + F W + +N   N++   ++ G GFL   AGF I Q ++
Sbjct: 14  LSDPKVRAWLFQII-TVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLI 72

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y+   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFR
Sbjct: 73  DYSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFR 132

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NIPPL+ I F Y +V   LP P  +       ++++RGL+ P       A  F+ S V+ 
Sbjct: 133 NIPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVA 192

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++  +   R +    E TG+     ++   L+  +P L  +     +H++ P L  FNF 
Sbjct: 193 VIAVVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSTLIFGSPVHWEVPQLKGFNFT 252

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++P
Sbjct: 253 GGWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIP 312

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL+
Sbjct: 313 QALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLA 372

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +SI I+L MN  N +IAL E+
Sbjct: 373 ISISISLLMNWYNKRIALIER 393


>gi|323189119|gb|EFZ74403.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli RN587/1]
          Length = 393

 Score =  272 bits (696), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 155/369 (42%), Positives = 225/369 (60%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+       +  LI GLP L        L +D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALLWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPL S
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLAS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IA+ E+
Sbjct: 385 NRRIAIVER 393


>gi|77457201|ref|YP_346706.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77381204|gb|ABA72717.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 393

 Score =  272 bits (695), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 164/380 (43%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QII  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++ 
Sbjct: 14  LSDPRVRAWVFQIITIVAVVSLGWYLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLIS 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   SYA   ++G +NT  + F G+I ATI+G +VG  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTEADSYARVFVIGLLNTLLVTFIGVILATILGFIVGVARLSKNWIISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   +P P +S       F+++RGL+ P   M      FV S V+ I
Sbjct: 134 IPPLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAQMADGFWAFVVSIVVAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +  +R +    E TG+     +    L   +P L  +     +H++ P L  FNF+G
Sbjct: 194 VAIVLMSRWANKRFEATGEPFHKFWAGLALFLVIPALCALIFGAPVHWEMPKLQGFNFVG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL +    R V++PQ
Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAAHSLGLRNGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|302062365|ref|ZP_07253906.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
          Length = 362

 Score =  272 bits (695), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 150/361 (41%), Positives = 226/361 (62%), Gaps = 2/361 (0%)

Query: 39  VIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTF 97
           + F W + +N   N++   ++ G GFL   AGF I Q ++ Y+   +YA   ++G +NT 
Sbjct: 2   IAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLIDYSESDTYARVFVIGLLNTL 61

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRNIPPL+ I F Y +V   LP
Sbjct: 62  LVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRNIPPLLQILFWYTAVFLTLP 121

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P  +       ++++RGL+ P       A  F+ S V+ ++  +   R +    E TG+
Sbjct: 122 GPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVAVIAVVMMVRWANKRFEATGQ 181

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                ++   L+  +P L ++     +H++ P L  FNF GG  + PE +SL +AL+ YT
Sbjct: 182 PFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFTGGWVLIPELISLTLALTIYT 241

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQA+R IIPPLTSQ+LNL KN
Sbjct: 242 AAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQALRVIIPPLTSQFLNLAKN 301

Query: 338 SSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++SI I++ MN  N +IAL E
Sbjct: 302 SSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISMLMNWYNKRIALIE 361

Query: 397 K 397
           +
Sbjct: 362 R 362


>gi|146278536|ref|YP_001168695.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556777|gb|ABP71390.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 420

 Score =  271 bits (694), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 168/405 (41%), Positives = 236/405 (58%), Gaps = 28/405 (6%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           LYD R  ++++Q+ +  L      W V+N   N+E        GFL  RAG++I Q +V 
Sbjct: 18  LYDTRYRSLTIQVFVFFLFMAGAAWLVDNTMRNLEALGKDFNFGFLWNRAGYDISQRLVE 77

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT+DS++  A+LVG +NT  +A  G I AT+IG +VG  RLS N LV  +  VYVE+FRN
Sbjct: 78  YTNDSTHGRAMLVGLLNTLLVALLGCIAATVIGVIVGVLRLSKNWLVGRLMTVYVEIFRN 137

Query: 139 IPPLVVIFFLYKSVLSVLPIPD------HSIVLPFGMFLN-----NRGLSFPT------- 180
           +P L+ I  +Y       P P+       + +    MFL+     NR  + P        
Sbjct: 138 VPLLLWILLIYAVFTEATPAPNAFRPNPETGLADRSMFLDAIAVTNRYTAVPNPVFSREL 197

Query: 181 -------LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    ++ +    + + VLG  L+      +     +TG      + S  L+ GLP
Sbjct: 198 GWLDLGLFYINIDVLAVLAAAVLGWWLNRMVKARATRIQNETGVRPATWWSSVLLLLGLP 257

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             VL+AL + L F  P L  FNF+GG  VS  FM+L++ALS YT AFIAEIVR+G++A+ 
Sbjct: 258 VAVLLALGFHLEF--PELRGFNFVGGLNVSNSFMALWLALSLYTGAFIAEIVRAGILAIS 315

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SV 352
           RGQ EAA ALGL   +   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ DL  ++
Sbjct: 316 RGQSEAAFALGLRPGRTMSLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYLDLRGTL 375

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GG  +NQTG+ +E +L+ M IYL++S++I+  MN  NA + LKE+
Sbjct: 376 GGITLNQTGRELECVLLMMLIYLAISLVISAVMNVYNAAVKLKER 420


>gi|149908407|ref|ZP_01897070.1| general L-amino acid transport system permease protein AapQ
           [Moritella sp. PE36]
 gi|149808570|gb|EDM68505.1| general L-amino acid transport system permease protein AapQ
           [Moritella sp. PE36]
          Length = 352

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/352 (41%), Positives = 224/352 (63%), Gaps = 2/352 (0%)

Query: 48  VYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS-YATAILVGFVNTFWLAFSGMIP 106
           +++N+ K  ++ G  FL E AGF I Q ++ Y   SS +    +VG +NT  +   G+I 
Sbjct: 1   MFDNVAKRGITTGFSFLGETAGFGISQSLIHYDDTSSTFLDVFIVGLLNTMLVGVIGIIL 60

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           A+ +G L+G GRLS N L++ +  VY+E FRNIP L+ I F Y  VL+ LP P  S+   
Sbjct: 61  ASGLGLLIGIGRLSPNYLISKLSLVYIETFRNIPILLQILFWYNVVLAALPSPRQSLSYF 120

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +F+NNRGL  P    ++ +   + +FV+  +  ++ ++ +   H+ TG+  P++ +S 
Sbjct: 121 DSIFINNRGLIIPDPIFESGSFSILVAFVIACISVVYLSKWANKRHDLTGEEFPVIRVSI 180

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G P L+       +  + P L  FNF GG T+ PE ++L  ALS YTA +IAE VR
Sbjct: 181 GMLIGAPLLMFFLAGQPISAEYPALKGFNFKGGITIIPELLALIFALSIYTATYIAEAVR 240

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP+GQ EAA +LGL      R V+LPQA+R IIPP+ +QYLNL+KNSSLA A+G+
Sbjct: 241 AGIEAVPQGQKEAAKSLGLKEHVILRKVILPQALRVIIPPVINQYLNLVKNSSLATAIGY 300

Query: 347 ADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++V++  GT +NQ GQAIEIIL+ M +YL  SI+I+L +N +NA++ +K +
Sbjct: 301 PEIVTLFSGTTLNQVGQAIEIILMTMAVYLVFSIVISLLLNWVNARMEIKGR 352


>gi|148658094|ref|YP_001278299.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus sp. RS-1]
 gi|148570204|gb|ABQ92349.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus sp. RS-1]
          Length = 396

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 162/408 (39%), Positives = 245/408 (60%), Gaps = 23/408 (5%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M    R T     SR  F  D RV  ++ QI+   L+  +    + N+  ++++  L LG
Sbjct: 1   MEHPPRSTSPMRLSR-AFWRDERVIQVAAQILFLALVIWVGSIALRNMLTSLQQQGLVLG 59

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             FL+  AGF+I    +PY+S  ++A A+ VG +NT  ++  G++ +T++G +VG  RLS
Sbjct: 60  FDFLNSGAGFDISDAPIPYSSTDTFARALQVGLLNTILVSVLGIVLSTLLGIVVGVARLS 119

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP- 179
           +N LV  +  V+VEV RN+P LV++ F+Y +    LP    ++ L   ++L+NRG++ P 
Sbjct: 120 SNWLVNRMAWVFVEVMRNVPLLVLLVFIYTAFFLKLPRARQAVSL-GPIYLSNRGVAIPW 178

Query: 180 ---TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
              T T      + + + + G V+ L      R +  ++G+  P +  S      L T+ 
Sbjct: 179 GEPTDTWSLYVSVLIGALIAGAVVGLAM----RWWQNRSGRPRPQVVPS------LLTMT 228

Query: 237 LIAL-------KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           LIAL       +  L    P +  FNF GG  +SPEFM+L I L  YTAAFI E+VR+G+
Sbjct: 229 LIALIGWFALPQPPLALSLPEIAGFNFRGGQVLSPEFMALLIGLVIYTAAFIGEVVRAGI 288

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP+GQ+EAA ALGL   +  RLV+ PQA+R IIPP+T+QYLNL KNS+LAVA+G+ DL
Sbjct: 289 QAVPKGQVEAARALGLNPSRTLRLVVFPQALRVIIPPVTNQYLNLTKNSTLAVAIGYPDL 348

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++ GTIINQTG+A+E+I + M +YL LS++ +L MN  N ++ L E+
Sbjct: 349 FAISGTIINQTGRAVEMIAVVMAVYLMLSLITSLVMNWYNRRVRLVER 396


>gi|317049796|ref|YP_004117444.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951413|gb|ADU70888.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 392

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/356 (43%), Positives = 218/356 (61%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+    ++ G GFL   AGF I Q ++ YT   +YA   +VG  NT  ++  
Sbjct: 37  YLIHNTVINLANRGITSGFGFLERSAGFGIVQHLIDYTEGDTYARVFMVGLTNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+I+G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CIVFASILGFFIGLARLSDNWLLRRLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P  T       FV + +L I  S+   R +R    KTG+     
Sbjct: 157 LNAFDLAFVSNRGLYIPWPTYAPGTWPFVIALLLAIAGSVGLFRFNRKHQLKTGQLRRTW 216

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            I+  +I   P +         H+D P L  FNF GG  + PE  SL +ALS YT++FIA
Sbjct: 217 PIAAAMIILFPLIAHAMFGAATHWDVPELRGFNFRGGFVMIPELASLTLALSIYTSSFIA 276

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++RSG+ +VP GQ EAA +LGL +    R V++PQAMR IIPPLTSQYLN++KNSSLA 
Sbjct: 277 EVIRSGIQSVPHGQNEAARSLGLPNPVTMRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAA 336

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMAVYLIISLVISLLMNLYNRKIALVER 392


>gi|146340849|ref|YP_001205897.1| putative amino acid transport protein, permease [Bradyrhizobium sp.
           ORS278]
 gi|146193655|emb|CAL77672.1| putative amino acid transport protein, permease protein
           [Bradyrhizobium sp. ORS278]
          Length = 401

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 152/361 (42%), Positives = 228/361 (63%), Gaps = 5/361 (1%)

Query: 31  IILALLLTVIFLWC----VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYA 86
           IIL +L   + +W     V N  +N+    ++ G GFL+  AGF+++Q ++ Y+   SY+
Sbjct: 29  IILQILFVAVLVWVGYEIVANARSNLAAQRITSGFGFLNNTAGFDVNQALISYSGSDSYS 88

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             ++VG +NT  ++  G++ ATI+G +V  GRLS N L++ +   YVE+ RN+P L  I 
Sbjct: 89  RVLMVGILNTLLVSVIGIVLATILGLIVALGRLSPNGLLSRVAGAYVELIRNLPLLFQIT 148

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F Y +VL+ LP P  SI +    FLNNRG   P    +     F+ +  + I  S+    
Sbjct: 149 FWYLAVLAALPGPRQSISVFSTFFLNNRGFIVPRPIEEPGLMPFLIALGVAIAGSIGLRF 208

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R      G A+ +      ++ GLP L L+     + F+ PVL  FNF GGS + PEF
Sbjct: 209 YARRELFVRGHAMRIWPYVLGMLIGLPLLALVVFGAPVAFEVPVLKGFNFAGGSRIIPEF 268

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L +AL+ YTA+FIAE+VR G+++V +GQMEA ++LGL+     RL+++PQA+R I+PP
Sbjct: 269 VALTLALTMYTASFIAEVVRGGILSVHKGQMEAGLSLGLSRGTVLRLIVVPQALRVILPP 328

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LT+QYLNL KNSSLAVA+G+ DLVSV  GT ++QTGQAIEII I M +YL++S++ +  M
Sbjct: 329 LTNQYLNLTKNSSLAVAIGYPDLVSVFAGTTMSQTGQAIEIIGITMGVYLAMSLITSAIM 388

Query: 386 N 386
           +
Sbjct: 389 S 389


>gi|153839317|ref|ZP_01991984.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AQ3810]
 gi|149747149|gb|EDM58137.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AQ3810]
          Length = 401

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 166/372 (44%), Positives = 231/372 (62%), Gaps = 21/372 (5%)

Query: 37  LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96
           L   F   +NN  NN++   ++ G GFL++ AGF I   ++ Y    SY    +VG +NT
Sbjct: 40  LVFFFYTIINNALNNLDARGIATGFGFLNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNT 99

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             ++  G+I AT IG  +G  RLS N LV+ +  VY+E FRNIP L+ IFF Y +VL  L
Sbjct: 100 ALVSVLGIILATAIGFTMGVARLSTNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQAL 159

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           P    S+ L   +FLN RGL FP    +  + + + +FV+G++ ++  +  +R+    TG
Sbjct: 160 PSARQSLSLGEAIFLNVRGLYFPAPVFNEGSGVVIAAFVIGLIATISISIWARNKQRLTG 219

Query: 217 KALPLLYIST----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           +  P+  I            + + G+P    I+L+Y      P L  FNF GG ++ PE 
Sbjct: 220 QQTPMGRIGLGLLVGLPLLVYFVSGMP----ISLEY------PELKGFNFKGGISIIPEL 269

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   K  +LV++PQA+R IIPP
Sbjct: 270 AALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRAKTLKLVVIPQALRIIIPP 329

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+LS++ +  M
Sbjct: 330 LTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLTLSLLTSALM 389

Query: 386 NRLNAKIALKEK 397
           N  N K+AL E+
Sbjct: 390 NLYNRKVALVER 401


>gi|328473627|gb|EGF44462.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 10329]
          Length = 401

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 166/372 (44%), Positives = 230/372 (61%), Gaps = 21/372 (5%)

Query: 37  LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96
           L   F   +NN  NN++   ++ G GFL + AGF I   ++ Y    SY    +VG +NT
Sbjct: 40  LVFFFYTIINNALNNLDARGIATGFGFLKQEAGFGIGLTLIEYNETYSYGRTFIVGLLNT 99

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             ++  G+I AT IG  +G  RLS N LV+ +  VY+E FRNIP L+ IFF Y +VL  L
Sbjct: 100 ALVSVLGIILATAIGFTMGVARLSTNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQAL 159

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           P    S+ L   +FLN RGL FP    +  + + + +FV+G++ ++  +  +R+    TG
Sbjct: 160 PSARQSLSLGEAIFLNVRGLYFPAPVFNEGSGVVIAAFVIGLIATISISIWARNKQRLTG 219

Query: 217 KALPLLYIST----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           +  P+  I            + + G+P    I+L+Y      P L  FNF GG ++ PE 
Sbjct: 220 QQTPMGRIGLGLLVGLPLLVYFVSGMP----ISLEY------PELKGFNFKGGISIIPEL 269

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   K  +LV++PQA+R IIPP
Sbjct: 270 AALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRAKTLKLVVIPQALRIIIPP 329

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+LS++ +  M
Sbjct: 330 LTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLTLSLLTSALM 389

Query: 386 NRLNAKIALKEK 397
           N  N K+AL E+
Sbjct: 390 NLYNRKVALVER 401


>gi|229588542|ref|YP_002870661.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229360408|emb|CAY47265.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 393

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/378 (42%), Positives = 226/378 (59%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D +V     QII  + +  +  +  NN   N++   ++ G  FL   AGF I Q ++ YT
Sbjct: 16  DPKVRAWLFQIITIVAVVSLGWYLFNNTQTNLQHRGITSGFDFLERSAGFGIAQHLIDYT 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              SYA   ++G +NT  + F G+I AT++G ++G  RLS N ++  +  VYVEVFRNIP
Sbjct: 76  ESDSYARVFVIGLLNTLLVTFIGVILATLLGFVIGVARLSPNWMINKLATVYVEVFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ I F Y +V   +P P +S       F+++RGL+ P          FV S V+ I+ 
Sbjct: 136 PLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAALAADGFWPFVASIVVAILA 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +   R +    E TG      +    L   +P L  +     LH++ P L  FNF+GG 
Sbjct: 196 IVLMARWANKRFEATGVPFHKFWAGLALFILIPALCALIFGAPLHWEMPKLQGFNFVGGW 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQA+
Sbjct: 256 VLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++SI
Sbjct: 316 RVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISI 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IAL E+
Sbjct: 376 SISLLMNWYNKRIALIER 393


>gi|154253425|ref|YP_001414249.1| polar amino acid ABC transporter inner membrane subunit
           [Parvibaculum lavamentivorans DS-1]
 gi|154157375|gb|ABS64592.1| polar amino acid ABC transporter, inner membrane subunit
           [Parvibaculum lavamentivorans DS-1]
          Length = 400

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 161/351 (45%), Positives = 220/351 (62%), Gaps = 5/351 (1%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109
            N+ + N+S G+GFL   AGF I Q ++PYT  SSY  A LVG +NT  +A  G++ + +
Sbjct: 52  ENLARLNISSGLGFLDTTAGFGIIQTLIPYTEQSSYGRAFLVGLLNTLVVAVIGIVLSVM 111

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +G  +G  RLS N L+A I   YVE+ RNIP L+ +FF Y +VL  LP P  SI    G+
Sbjct: 112 LGFFIGVMRLSRNWLIAKIAAGYVEIMRNIPLLLHLFFWYFAVLRPLPGPAESISPLPGV 171

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F+NNRGL  P       A  F  +  + +       R +R     TG+  P    +  L+
Sbjct: 172 FINNRGLILPEPIFGATASAFFIAIAVALAAGFLLIRWARKRQVATGQLFPAWRTAVALL 231

Query: 230 FGLPTLVLI--ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             LP LV +     ++L F +     F+F GG  + PEF++L + L+ YTA FIAEIVR+
Sbjct: 232 VVLPGLVWLVAGAPFELAFARHA--GFDFDGGMRLLPEFVALVLGLTLYTAGFIAEIVRA 289

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+++V +GQ EAA ALGL      RLV++PQA+R IIPPLTSQ LNL KNSSLAVA+ + 
Sbjct: 290 GILSVSKGQREAAAALGLKDSTTLRLVVIPQALRLIIPPLTSQILNLTKNSSLAVAIAYP 349

Query: 348 DLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           DLV+V  GT++NQTGQAIE+I + M +YL+LS++ +L MN  NA IALKE+
Sbjct: 350 DLVAVFAGTVLNQTGQAIEVIALTMAVYLTLSLITSLLMNWYNAHIALKER 400


>gi|283788088|ref|YP_003367953.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
 gi|282951542|emb|CBG91241.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
          Length = 393

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 226/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  + ++ ++N  +N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAIIAVAAVAIYLIHNTIDNLSNRGITSGFAFLERSAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG  NT  ++   ++ A+ +G  +G  RLS N L+  +  VY+E+FRNIPPL+ IFF Y
Sbjct: 85  LVGLSNTLLVSALCIVFASALGFFLGLARLSDNWLLRKLSTVYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P+         FV S ++ I +S+   R +R
Sbjct: 145 FAVLRNLPGPRQAVSALDMVFLSNRGLYIPSPQTGEGLLAFVLSLIIAITISVVLFRYNR 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+      ++  L+  LP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 MHQTKTGQLRKTWPVAAVLLIALPLLAHWLSGPALHWDMPELKGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL H    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPHAVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLLISLSISLLMNIY 384

Query: 389 NAKIALKEK 397
           N ++AL E+
Sbjct: 385 NRRMALVER 393


>gi|26988033|ref|NP_743458.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982753|gb|AAN66922.1|AE016320_10 general amino acid ABC transporter, permease protein [Pseudomonas
           putida KT2440]
          Length = 392

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 160/380 (42%), Positives = 227/380 (59%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LNDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  ++      FV +  L I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIEDMFFISNRGLNMPGASIADGFWPFVVALALAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R +     +TG      +    L   +P+L ++     + +D P L  FNF+G
Sbjct: 193 AAIALMVRYANKRFNETGVPFHKFWAGLLLFIAIPSLSVLLFGSPVTWDMPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|261823405|ref|YP_003261511.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607418|gb|ACX89904.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 434

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 149/368 (40%), Positives = 226/368 (61%), Gaps = 1/368 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q +L LL+     W   NV  N+   N++ G GFL   A FEI + +V +T   SY  A+
Sbjct: 68  QCLLGLLIVAFSYWLYANVVENLRSQNIATGFGFLDHTAQFEIGEKLVAFTPRDSYLRAL 127

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            VG +NT ++   G++ AT++G  VG  R+S N L+A +   Y+E+ RNIP ++ + F +
Sbjct: 128 GVGLLNTLYVTLCGIVLATLLGFSVGIARVSRNWLLARLAGGYIEMMRNIPVILQVIF-W 186

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             V+  LP P  +I L    FL NRGLSF          +   + +   ++SL   R++R
Sbjct: 187 SVVIRNLPSPRDAIELGSLGFLTNRGLSFAVPAAHHGWLLSGIALLAAALISLILNRVAR 246

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           +  E  G++L    ++     GLP LV          D+P+L  FNF GG TVSPEF +L
Sbjct: 247 YIRESRGRSLSTGRLTLVAFIGLPLLVWWISGAPAELDRPILRGFNFRGGFTVSPEFTAL 306

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL  +     R +++PQAMR I+PPLTS
Sbjct: 307 LLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIVPPLTS 366

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           QY++L KNSS+AV VG+ +L ++  T++NQTGQA+E+I I M +YL++SI+ +L MN  N
Sbjct: 367 QYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVSIVTSLLMNLFN 426

Query: 390 AKIALKEK 397
             +A+KE+
Sbjct: 427 RAVAIKER 434


>gi|325275055|ref|ZP_08141043.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324099818|gb|EGB97676.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 392

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 160/380 (42%), Positives = 230/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LSDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI L    F++NRGL+ P  +M      FV +  + +
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINLNDLFFISNRGLNMPGASMADGFWPFVAALAVAV 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  RL+    ++TG      + +  L+  +P L ++     + ++ P L  FNF+G
Sbjct: 193 GAVWLMVRLANKRFDETGVPFHKFWAALALLLVIPGLSVLLFGCPVTWEAPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|148549629|ref|YP_001269731.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148513687|gb|ABQ80547.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 392

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 159/380 (41%), Positives = 231/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     Q++  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LNDPRVRAWLFQVLTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N +++ +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMISKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  +M      FV +  + I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIDDMFFISNRGLNMPGASMADGFWPFVVALAVAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +   R +    ++TG      ++   L   +P L ++     + ++ P L  FNF+G
Sbjct: 193 VAIVLMVRFANKRFDETGVPFHKFWVGLALFIAIPGLSVLLFGSPVSWEVPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|149913100|ref|ZP_01901634.1| hypothetical protein RAZWK3B_03890 [Roseobacter sp. AzwK-3b]
 gi|149813506|gb|EDM73332.1| hypothetical protein RAZWK3B_03890 [Roseobacter sp. AzwK-3b]
          Length = 404

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 161/393 (40%), Positives = 232/393 (59%), Gaps = 8/393 (2%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F+  K + D R  + + Q I  +LL  +F +  +N+  N+  + L++  GFLSE AG++I
Sbjct: 12  FTLSKLINDTRYRSYTFQFIALVLLIALFAYLGSNLAQNLRDAGLNISYGFLSEPAGYDI 71

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q ++ Y S S++  A +VG +NT  +AF G I ATIIG +VG  RLS N L+  +  VY
Sbjct: 72  NQRLIEYDSQSTHLRASIVGVLNTLLVAFLGCILATIIGVVVGVLRLSQNWLIRKLMSVY 131

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDT 185
           VE+FRN+P L+ I  +     +VLP P      D    + +  F    RG  FP    +T
Sbjct: 132 VEIFRNVPVLIWILIIMAVFTAVLPQPRDFRGDDAEASMLWDAFAFTGRGFYFPKPVFET 191

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            + I V +F+  I+        +R    + G+ LP+ + S  L F    L+       + 
Sbjct: 192 GSTIVVLTFLASIIGIFVYRSYARKQLFQKGRLLPVFWPSVGLFFVPAVLMFFIAGRPIS 251

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            + P L  FNF GG      F+SL+ ALS YTAAFIAE VR+G++AV +GQ EAA +LGL
Sbjct: 252 MEYPSLQGFNFQGGIYARNSFISLWFALSIYTAAFIAENVRAGILAVSKGQTEAAASLGL 311

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAI 364
              +   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+  ++GG  +NQTG+AI
Sbjct: 312 RPNRIMNLVILPQALRIIIPPLISQYLNLTKNSSLAIAVGYMDITGTLGGITLNQTGRAI 371

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E +L+ M  YL++S+ I+  MN  N  + LKE+
Sbjct: 372 ETVLLLMLFYLAISLAISAVMNLYNNAVKLKER 404


>gi|313500473|gb|ADR61839.1| AapQ [Pseudomonas putida BIRD-1]
          Length = 392

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 161/380 (42%), Positives = 227/380 (59%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LNDPRVRAWLFQILTIVFVIGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  +M      FV +  L I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIQDMFFISNRGLNMPGASMADGFWPFVVALALAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R +     +TG      +    L   +P+L ++     + +D P L  FNF+G
Sbjct: 193 AAIAVMVRYANKRFNETGVPFHKFWAGLLLFIAIPSLSVLLFGSPVTWDMPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|83854940|ref|ZP_00948470.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Sulfitobacter sp. NAS-14.1]
 gi|83842783|gb|EAP81950.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Sulfitobacter sp. NAS-14.1]
          Length = 401

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/389 (40%), Positives = 236/389 (60%), Gaps = 10/389 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L D R  + + Q I  +LL  +  +   N+  N+ ++ L++  GFL+  AG++I+Q ++
Sbjct: 14  LLNDTRYRSYTFQFIALILLIALMSFLGINLVRNLAEAGLNISYGFLNVPAGYDINQSLI 73

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S SS   A +VG +NT  +AF   I ATI+G + G  RLS N LV+ +  VYVE+FR
Sbjct: 74  DYNSQSSNLRAAMVGIINTLLVAFLACITATILGVIAGVARLSKNWLVSKLMSVYVEIFR 133

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH-------SIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           NIP L+ I  +Y  + +VLP P+        S +L       NRG+  P       + I 
Sbjct: 134 NIPVLIWILMIYTLMTAVLPAPNKFRGDNATSSMLFDAFAFTNRGIYIPAPVWGPGSMIV 193

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKP 249
           V +FVL I+ ++   R +     +TGK LP+ +  T  I  +PT+V+   +   +  D P
Sbjct: 194 VATFVLSIIAAIIYRRYAVSLLFRTGKLLPMGW-PTVAILLVPTIVMFFIMGSPIALDYP 252

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG  +    ++L++ALS YT AFIAE VR+G+ A+ +GQ EAA +LGL  ++
Sbjct: 253 ELKGFNFRGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISKGQTEAASSLGLRPKR 312

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIIL 368
              LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+  ++GG  +NQTG+AIE +L
Sbjct: 313 VMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVL 372

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M  YL++S+ I+  MN  N  ++LKE+
Sbjct: 373 LLMLFYLTISLSISAIMNVYNNSVSLKER 401


>gi|28898395|ref|NP_798000.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366019|ref|ZP_05778497.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus K5030]
 gi|260876626|ref|ZP_05888981.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AN-5034]
 gi|260898002|ref|ZP_05906498.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus Peru-466]
 gi|28806612|dbj|BAC59884.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308088046|gb|EFO37741.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus Peru-466]
 gi|308094314|gb|EFO44009.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AN-5034]
 gi|308114200|gb|EFO51740.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus K5030]
          Length = 401

 Score =  269 bits (687), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 165/372 (44%), Positives = 230/372 (61%), Gaps = 21/372 (5%)

Query: 37  LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96
           L   F   +NN  NN++   ++ G GFL++ AGF I   ++ Y    SY    +VG +NT
Sbjct: 40  LVFFFYTIINNALNNLDARGIATGFGFLNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNT 99

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             ++  G+I AT IG  +G  RLS N LV+ +  VY+E FRNIP L+ IFF Y +VL  L
Sbjct: 100 ALVSVLGIILATAIGFTMGVARLSTNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQAL 159

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           P    S+ L   +FLN RGL FP    +  + + + +F +G++ ++  +  +R+    TG
Sbjct: 160 PSARQSLSLGEAIFLNVRGLYFPAPVFNEGSGVVIAAFAIGLIATISISIWARNKQRLTG 219

Query: 217 KALPLLYIST----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           +  P+  I            + + G+P    I+L+Y      P L  FNF GG ++ PE 
Sbjct: 220 QQTPMGRIGLGLLVGLPLLVYFVSGMP----ISLEY------PELKGFNFKGGISIIPEL 269

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   K  +LV++PQA+R IIPP
Sbjct: 270 AALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRAKTLKLVVIPQALRIIIPP 329

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+LS++ +  M
Sbjct: 330 LTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLTLSLLTSALM 389

Query: 386 NRLNAKIALKEK 397
           N  N K+AL E+
Sbjct: 390 NLYNRKVALVER 401


>gi|83941463|ref|ZP_00953925.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Sulfitobacter sp. EE-36]
 gi|83847283|gb|EAP85158.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Sulfitobacter sp. EE-36]
          Length = 404

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 158/389 (40%), Positives = 236/389 (60%), Gaps = 10/389 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L D R  + + Q I  +LL  +  +   N+  N+ ++ L++  GFL+  AG++I+Q ++
Sbjct: 17  LLNDTRYRSYTFQFIALILLIALMSFLGINLVRNLAEAGLNISYGFLNVPAGYDINQSLI 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S SS   A +VG +NT  +AF   + ATI+G + G  RLS N LV+ +  VYVE+FR
Sbjct: 77  DYNSQSSNLRAAMVGIINTLLVAFLACVTATILGVIAGVARLSKNWLVSKLMSVYVEIFR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH-------SIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           NIP L+ I  +Y  + +VLP P+        S +L       NRG+  P       + I 
Sbjct: 137 NIPVLIWILMIYTLMTAVLPAPNKFRGDNATSSMLFDAFAFTNRGIYIPEPVWGPGSMIV 196

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKP 249
           V +FVL I+ ++   R +     +TGK LP+ +  T  I  +PT+V+   +   +  D P
Sbjct: 197 VATFVLSIIAAIIYRRYAVSLLFRTGKLLPMGW-PTVAILLVPTIVMFFIMGSPIALDYP 255

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG  +    ++L++ALS YT AFIAE VR+G+ A+ +GQ EAA +LGL  ++
Sbjct: 256 ELKGFNFRGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISKGQTEAASSLGLRPKR 315

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIIL 368
              LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+  ++GG  +NQTG+AIE +L
Sbjct: 316 VMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVL 375

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M  YL++S+ I+  MN  N  ++LKE+
Sbjct: 376 LLMLFYLTISLSISAIMNVYNNSVSLKER 404


>gi|167035542|ref|YP_001670773.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862030|gb|ABZ00438.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 392

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 159/380 (41%), Positives = 229/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LNDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  +M      F  + V+ I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIDDMFFISNRGLNMPGASMADGFWPFAVAVVVAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R++    ++TG      +    L+  +P L ++     + ++ P L  FNF+G
Sbjct: 193 AAIAVMVRMANKRFDETGVPFHKFWAGLALLIAIPGLSVLLFGSPVTWEVPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|163793103|ref|ZP_02187079.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
 gi|159181749|gb|EDP66261.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
          Length = 399

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 238/396 (60%), Gaps = 3/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K +    +R  S  ++L+D RV ++  Q I+A+++  +  +   N   N++   +S G  
Sbjct: 6   KGSPHRASRSLS--EWLHDERVRSVLYQAIVAIVVIAVARYLFINTSENLQARGMSAGFD 63

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FLS  AGF I   ++PYT+  SY    LVG  NT  +AF  +I  T++G LVG  RLS N
Sbjct: 64  FLSTGAGFSIAWSVLPYTAGDSYFHVYLVGIGNTLMVAFVAIICTTLLGFLVGIMRLSKN 123

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L+A +   YVE+ RN P L+ I F + +V S+LP P+ S+ L    +LNNRGL  P   
Sbjct: 124 WLIAQVASWYVEILRNTPLLLQILFWFLAVFSLLPRPNKSLSLLDLFYLNNRGLYIPAPV 183

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                 I + + ++ +  +      +R  H  TG+  P  +    ++FGLP LV +    
Sbjct: 184 PGDGFNITLIAVLVAVGATYAQAVWARKRHFDTGQRFPAFWTGLGILFGLPLLVFLVTGA 243

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L FD P L  FNF+GG++V P F +L +AL  Y +A++AE VR+G+++V  GQ EAA +
Sbjct: 244 PLTFDYPALKGFNFLGGASVPPAFCALLLALVIYHSAYMAEAVRAGIMSVSHGQTEAAYS 303

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL      RLV++PQAMR+++PP+ S ++N++KNSSLA+A+G+ DLV+V   T +NQ+G
Sbjct: 304 LGLRPGMTLRLVIIPQAMRAVVPPMISNWMNVVKNSSLAIAIGYPDLVAVYMQTSLNQSG 363

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            AIEI+ + M  Y+S+S+ I++ +N  N  + LKE+
Sbjct: 364 HAIEIVAMVMLFYMSVSLSISMALNYYNKIVQLKER 399


>gi|261210914|ref|ZP_05925204.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260839889|gb|EEX66489.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 433

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 170/398 (42%), Positives = 239/398 (60%), Gaps = 4/398 (1%)

Query: 3   KNARKTVTRYFSR-MKFLYDMRVHNISVQIILALLLTVIFLWC-VNNVYNNMEKSNLSLG 60
            NA  +++   S+    LY+    + + Q I A+   V FL+  VNN   N+E   ++ G
Sbjct: 37  NNAASSLSDAHSKHTNLLYNPTFRSAAFQFI-AVCALVFFLYTIVNNALTNLESRGIATG 95

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             FL + AGF I Q +V Y    SY    +VG +NT  ++  G+I AT++G ++G  RLS
Sbjct: 96  FAFLDQPAGFGISQSLVEYDETYSYGRTFIVGLLNTALVSLLGIILATLLGFVLGIARLS 155

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           +N L++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ +   ++LN +GL    
Sbjct: 156 SNWLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHVGEWLYLNVKGLYLVK 215

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              +T++     + + G       +  +R+    TG+  P+   +  L    P LV   L
Sbjct: 216 PIFETSSMWVFVALLAGAAACWVLSIWARNRQRLTGQQTPMGRYAILLCVAFPVLVYYLL 275

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  + PVL  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA
Sbjct: 276 GQPITAEYPVLRGFNFQGGITVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAA 335

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
           ++LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQ
Sbjct: 336 MSLGLPRSKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQ 395

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TGQAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 396 TGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 433


>gi|237730187|ref|ZP_04560668.1| amino acid ABC transporter permease [Citrobacter sp. 30_2]
 gi|226908793|gb|EEH94711.1| amino acid ABC transporter permease [Citrobacter sp. 30_2]
          Length = 393

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/369 (43%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I ++ ++N  NN+  S ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVIAVISIAVYLIHNTINNLNNSGITSGFSFLDRSAGFGIVQHLIDYEQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+I+G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 85  VVGLLNTLLVSALCIVFASILGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     MFL+NRGL  P   M      F  + V+ +V+++   R +R
Sbjct: 145 FAVLRNLPGPRQAVNALDLMFLSNRGLYIPAPQMGEGFFAFCTAVVIALVVTIGLFRFNR 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+       +  LI  LP +        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 MHQTKTGQLRRTWPTALALIVLLPVISQWMFGAALHWDIPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IAL E+
Sbjct: 385 NRRIALIER 393


>gi|262165600|ref|ZP_06033337.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262025316|gb|EEY43984.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 401

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 171/400 (42%), Positives = 232/400 (58%), Gaps = 9/400 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
             A +    +      LY+        Q +    L+      VNN  NN+E   ++ G  
Sbjct: 6   HTASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL   AGF I Q +V Y    SY    LVG +NT  ++  G+I AT++G ++G  RLS N
Sbjct: 66  FLDHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ L   ++LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPV 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            +  +   + + + GI    VLS++A    R     TG+  P+         G P LV  
Sbjct: 186 FEAGSLWVLIALLAGIAFCWVLSIWANNRQR----LTGQQTPMGRYVLICCVGFPLLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           AL   +  + PVL  FNF GG T+ PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 ALGQPISAEYPVLRGFNFQGGLTILPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA++LGL+  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +
Sbjct: 302 AAMSLGLSRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTGQAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 362 NQTGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|260901585|ref|ZP_05909980.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AQ4037]
 gi|308108542|gb|EFO46082.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AQ4037]
          Length = 401

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 164/372 (44%), Positives = 229/372 (61%), Gaps = 21/372 (5%)

Query: 37  LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96
           L   F   +NN  NN++   ++ G GFL++ AGF I   ++ Y    SY    +VG +NT
Sbjct: 40  LVFFFYTIINNALNNLDARGIATGFGFLNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNT 99

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             ++  G+I  T IG  +G  RLS N LV+ +  VY+E FRNIP L+ IFF Y +VL  L
Sbjct: 100 ALVSVLGIILTTAIGFTMGVARLSTNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQAL 159

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           P    S+ L   +FLN RGL FP    +  + + + +F +G++ ++  +  +R+    TG
Sbjct: 160 PSARQSLSLGEAIFLNVRGLYFPAPVFNEGSGVVIAAFAIGLIATISISIWARNKQRLTG 219

Query: 217 KALPLLYIST----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           +  P+  I            + + G+P    I+L+Y      P L  FNF GG ++ PE 
Sbjct: 220 QQTPMGRIGLGLLVGLPLLVYFVSGMP----ISLEY------PELKGFNFKGGISIIPEL 269

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   K  +LV++PQA+R IIPP
Sbjct: 270 AALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRAKTLKLVVIPQALRIIIPP 329

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+LS++ +  M
Sbjct: 330 LTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLTLSLLTSALM 389

Query: 386 NRLNAKIALKEK 397
           N  N K+AL E+
Sbjct: 390 NLYNRKVALVER 401


>gi|182678576|ref|YP_001832722.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634459|gb|ACB95233.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 391

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 163/381 (42%), Positives = 230/381 (60%), Gaps = 13/381 (3%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R     VQ +  L L ++ +     ++ NM    +     F ++ AGF+I+Q  + Y+
Sbjct: 20  DPRKRGFIVQALFVLALCLVLVGMFTTLHANMVARGIPTDFSFWNQTAGFDINQTPIAYS 79

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             S+Y  A LVG +NT  +A  G++  TIIG +VG  RLS N+LV+++   YVE  RNIP
Sbjct: 80  PLSTYGRAFLVGLINTLIVASIGLVCTTIIGVIVGISRLSKNRLVSFLAATYVETLRNIP 139

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+ + F Y ++L  LP P  S++ PFG  LNNRGL  P  ++   A     +  LG+  
Sbjct: 140 LLLQLLFWYNAILKPLPGPRQSLLFPFGTVLNNRGLFLPLPSLLPGAAWVGAALALGLAA 199

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGL---PTLVLIALKYQLHFDKPVLGQFNFI 257
           S    R         G AL   +  T L   L   P ++   L   L FD+P+L  FN+ 
Sbjct: 200 SFLVGR---------GTALKPGWPKTLLCLVLALGPAIIAAMLAPPLAFDRPILKGFNYT 250

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  V PE ++L + LS YTAAFIAEI+R+G++AVPRGQ EAA ALGL      R ++LP
Sbjct: 251 GGFRVLPELVALLLGLSLYTAAFIAEIIRAGIMAVPRGQSEAAEALGLPSGLTMRRIILP 310

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R +IPPLTSQYLNL+KNSSLAV +G+ DLV V  GT++NQTG A++II I M +YL+
Sbjct: 311 QALRVVIPPLTSQYLNLIKNSSLAVFIGYPDLVQVFAGTVLNQTGAAVQIIFITMAVYLA 370

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++ +  MN +N ++AL E+
Sbjct: 371 VSLVTSFAMNLINRRMALVER 391


>gi|242241100|ref|YP_002989281.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133157|gb|ACS87459.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 392

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 159/372 (42%), Positives = 231/372 (62%), Gaps = 7/372 (1%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QIIL + +     + V+N   N+ +  ++ G  FL+  AGF I Q ++ Y    +YA   
Sbjct: 24  QIILVIAVLAFAGYLVSNTVTNLAQRGITSGFAFLNNSAGFGIIQHLIDYQQGDTYARVF 83

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G +VG  RLS N L+  +   Y+E FRNIPPL+ IFF Y
Sbjct: 84  VVGLLNTLLVSAICIVCASLLGFVVGLARLSDNWLLRKLSTFYIETFRNIPPLLQIFFWY 143

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  + + A   V S V  +++++  +R S+
Sbjct: 144 FAVLRNLPGPRQAVNALDTFFLSNRGLYIPSAELGSGALSAVLSLVATLMVAILISRRSK 203

Query: 210 HFHEKTG---KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +   TG   K  P+      ++ GL  LV       LH+D P L  FNF GG  + PE 
Sbjct: 204 RYQALTGQQRKTWPIPLTMLIVLMGLSHLVF---GPALHWDVPELKGFNFRGGMVLIPEL 260

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L +ALS YT++FIAEI+RSG+ +V  GQ EAA++LGL      + V+LPQA+R IIPP
Sbjct: 261 AALALALSIYTSSFIAEIIRSGIQSVSHGQHEAALSLGLPKSVTLKKVILPQALRVIIPP 320

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L M
Sbjct: 321 LTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLVM 380

Query: 386 NRLNAKIALKEK 397
           N  N KIAL E+
Sbjct: 381 NVYNRKIALIER 392


>gi|89901103|ref|YP_523574.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89345840|gb|ABD70043.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 391

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/368 (40%), Positives = 223/368 (60%), Gaps = 4/368 (1%)

Query: 32  ILALLLTVIFLW-CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           ++A+L    F+W   +N   NM    +  G  FL + AGF+I + + P+ S   Y  A L
Sbjct: 26  VIAILAIGGFVWFLAHNTLLNMRVRGIQSGFDFLKQAAGFDIGESLYPFDSAQPYWQAFL 85

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG  NT  +A  G+I AT++GTL+G GR S N LV  +C+VYVE+FRNIP L+ +   Y 
Sbjct: 86  VGVTNTLRVAVLGIILATVLGTLLGVGRFSRNALVRGLCQVYVELFRNIPVLLQLLLWYV 145

Query: 151 SVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +  VLP    + V  FG  FL+  GL++P            +  + G+VL+    R ++
Sbjct: 146 ILTEVLPAASDAWV--FGSFFLSKGGLNYPIPVWSIGQLWAAYGLIPGLVLAWVYRRWAK 203

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
              E TG+   ++++   ++     L  +        ++P  G F+   G  ++PEF+++
Sbjct: 204 RQFEATGRVRSMVWMPLVIVLAASLLGWLLGGAPTALNRPFKGDFSIENGGALTPEFLAV 263

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L+ YTA+FIAE+VR G+ +V  GQ EAA ALGL+ ++  RLV+LPQA+R IIPPLT+
Sbjct: 264 LLGLTLYTASFIAEVVRGGIQSVALGQSEAAAALGLSRQQEMRLVMLPQALRVIIPPLTN 323

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           QYLNL KNSSLAVA+G+ D+VS+  T +NQTG+A+E I + M +YLS S+  A+ MN  N
Sbjct: 324 QYLNLTKNSSLAVAIGYPDVVSIANTALNQTGRAVECISLVMLVYLSTSLGTAVLMNWYN 383

Query: 390 AKIALKEK 397
           ++ A+KE+
Sbjct: 384 SRSAIKER 391


>gi|258621542|ref|ZP_05716575.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258586160|gb|EEW10876.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
          Length = 401

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 172/398 (43%), Positives = 231/398 (58%), Gaps = 9/398 (2%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A +    +      LY+        Q +    L+      VNN  NN+E   ++ G  FL
Sbjct: 8   ASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFAFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
              AGF I Q +V Y    SY    LVG +NT  ++  G+I AT++G ++G  RLS N L
Sbjct: 68  DHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           ++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ L   ++LN +GL       +
Sbjct: 128 ISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPVFE 187

Query: 185 TNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +   + + + GI    VLS++A    R     TG+  P+         G P LV  AL
Sbjct: 188 AGSLWVLIALLAGIAFCWVLSIWANNRQR----LTGQQTPMGRYVLICCVGFPLLVYFAL 243

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  + PVL  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA
Sbjct: 244 GQPISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAA 303

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
           ++LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQ
Sbjct: 304 MSLGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQ 363

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TGQAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 364 TGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|71083647|ref|YP_266367.1| amino acid ABC transporter [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062760|gb|AAZ21763.1| amino acid ABC transporter [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 381

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 160/382 (41%), Positives = 231/382 (60%), Gaps = 7/382 (1%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
           M++  I  Q++  L + +IF +   N   NM+   +  G GFL++ A F+I   ++ Y  
Sbjct: 1   MKLKKILPQLLTLLFIVLIFGFFTMNAQENMDTRGIEFGFGFLTQEASFDIQFSLIDYDG 60

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             SYA A LVG +NT  +AF G+I AT++G +VG  RLS N L+      Y+E FRN+P 
Sbjct: 61  SHSYARAYLVGLLNTLLVAFIGIILATLLGLIVGVARLSPNYLIRKTASFYIEFFRNVPL 120

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ IFF Y + L  LP+P  + +L    F+  +GL  P   + TN  IF  + ++ ++L 
Sbjct: 121 LLQIFFWYFAALRALPMPQDATLLLGSSFMTIKGLYTPA-PIWTNFDIFFTTLIVAMILI 179

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFNF 256
            F  + ++   E+ GK LP+L IS  +  GLP L  +     L F  P L       + F
Sbjct: 180 FFFVKFAKKKQEQEGKQLPVLIISLAIFIGLPLLTFLVGGVDLSFSFPELRKMSQSSYTF 239

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  + PE ++L +AL+ YTA FIAE VR+G+  + +GQ EAA ++GLT  +  +LV++
Sbjct: 240 DGGMGIPPELIALTLALTLYTATFIAENVRAGIQGIGKGQKEAAASIGLTPSQVLKLVIM 299

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQA+R IIPP T+QYLNL KNSSLA A+ + DLV V  GT + QTG+AIEI+ I M  YL
Sbjct: 300 PQALRIIIPPTTNQYLNLTKNSSLAAAIAYPDLVLVFAGTAMMQTGKAIEIVGITMATYL 359

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           ++SI I+L MN  N +IA+KEK
Sbjct: 360 TISIAISLLMNWYNQRIAIKEK 381


>gi|262277477|ref|ZP_06055270.1| general L-amino acid transport system permease protein AapQ [alpha
           proteobacterium HIMB114]
 gi|262224580|gb|EEY75039.1| general L-amino acid transport system permease protein AapQ [alpha
           proteobacterium HIMB114]
          Length = 398

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 162/401 (40%), Positives = 239/401 (59%), Gaps = 11/401 (2%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           +KN  + + +Y S        R+  +  Q +L   L +I  +   N   N+E   +  G 
Sbjct: 4   LKNKVERIDQYLSDHP-----RIKFVLPQALLFAFLILIVGYFSFNASTNLEARGIDTGF 58

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FL+++A F+I   ++ + S  +Y  A LVG +NT  ++  G++ ATI+G + G  RLS+
Sbjct: 59  SFLNKKASFDIQFSLIEFDSSMTYGRAYLVGLLNTILVSVIGILFATILGFIFGILRLSS 118

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           N L + +   Y+E FRNI  L+ IFF Y +VL  LP  ++SIVL   ++ N +G+ FP  
Sbjct: 119 NPLASGLATSYIEFFRNISLLLQIFFWYFTVLRFLPQTENSIVLFDSIYANIKGVYFPKF 178

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
              TN    ++  +   V   F    +R   E TGK LP   IS  ++  LPTLV+    
Sbjct: 179 VW-TNLSFLIYGLIFTFVSIYFFNIYARKLRENTGKILPQFLISLGILIILPTLVVFIFG 237

Query: 242 YQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
             + F  P L    G  N+IGGS++ PEF++L  ALS YT+ FIAE VR+G++ + +GQ 
Sbjct: 238 VGVEFSHPKLEIKMGIANYIGGSSIIPEFLALAFALSIYTSTFIAENVRAGILGIDKGQK 297

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTI 356
           EAA ++GLT+ +  RLV++PQA+R IIPP T+QYLNL KNSSLA A+ + D+V V  GT 
Sbjct: 298 EAAASIGLTNAQVLRLVVIPQALRIIIPPTTNQYLNLTKNSSLAAAIAYPDIVLVFAGTA 357

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + QTG+AIEI+ I M  YL+LSI I++FMN  N K++L E+
Sbjct: 358 LMQTGRAIEIVTITMLTYLTLSISISIFMNWYNKKVSLTER 398


>gi|299133836|ref|ZP_07027030.1| polar amino acid ABC transporter, inner membrane subunit [Afipia
           sp. 1NLS2]
 gi|298591672|gb|EFI51873.1| polar amino acid ABC transporter, inner membrane subunit [Afipia
           sp. 1NLS2]
          Length = 401

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/364 (45%), Positives = 229/364 (62%), Gaps = 3/364 (0%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
             I+ Q+  A LL  +    V N  +N+   +++ G GFLS  AGF ++Q ++ Y+   +
Sbjct: 27  KGIAGQLAFAGLLAWLAFDIVTNAQDNLRAQHIASGFGFLSGTAGFSVNQALIRYSEADT 86

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y     VG +NT  ++  G++ AT+IG  V  GRLS N L+A +   YVE+ RN+P L  
Sbjct: 87  YLRVFEVGLLNTLLVSIIGIVFATLIGFAVALGRLSPNWLLARLSGGYVEIIRNLPLLFQ 146

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           + F Y +VL+ LP P  S+ + FG+ FLNNRG   P +  +  A +F  + +  I  SL 
Sbjct: 147 LLFWYLAVLAALPNPRQSLSI-FGVAFLNNRGFVVPHVVPEQGAGVFAVAILAAIAASLL 205

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
            T  +R    + G  L +   +  L+ GLP L +        FD PVL  FNF GG+ V+
Sbjct: 206 MTVYARRRLYRFGDRLRVWPFALALLVGLPLLSIALFGAPASFDLPVLRGFNFAGGTRVT 265

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PEF++L IALS YTAAFIAEIVR GL+AVP+GQMEA  +LGL+     RLV++PQAMR I
Sbjct: 266 PEFVALTIALSTYTAAFIAEIVRGGLLAVPKGQMEAGASLGLSRPAILRLVIIPQAMRLI 325

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +PPLT+QYLNL KNSSLAVA+G+ DL SV  GT ++QTGQA+EII + M +YL++S++ +
Sbjct: 326 LPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTLSQTGQAVEIIAMTMAVYLAISLITS 385

Query: 383 LFMN 386
             MN
Sbjct: 386 ALMN 389


>gi|91977031|ref|YP_569690.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           BisB5]
 gi|91683487|gb|ABE39789.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB5]
          Length = 401

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/395 (40%), Positives = 238/395 (60%), Gaps = 3/395 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   AR    ++ ++++     R     +  Q++    L  I    V+N  +N+    ++
Sbjct: 1   MAIEARPPPAQFGAKLRRALGGRSGWKGLVAQLLFVATLCWIGYAIVDNARDNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY+   SY    LVG  NT  ++  G+  AT+IG LV  GR
Sbjct: 61  SGFGFMSQTAGFGVSQTLIPYSESDSYTRVFLVGLANTLMVSVIGIFFATLIGFLVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ L    FL+NRG+  
Sbjct: 121 LSPNWLISRIAGGYVELIRNLPLLFQILFWYLAVLGALPGPRQSVTLFDSFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ + ++ ++ ++     +R    +TGK + +   S  L+ GLP +  +
Sbjct: 181 PRPVGEAGLDGFLVALLIAVIGAIVLPIYARRRLFQTGKPMIVWPWSLGLLIGLPLIAAL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ PVL  FNF GGS ++PEF++L +ALS YTAAFIAEIVR+G+++V +GQME
Sbjct: 241 IFGKPFGFEIPVLKGFNFAGGSRLAPEFVALTLALSTYTAAFIAEIVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RLV++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGATLRLVVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +QTGQAIE+I I M +YL +S++ +  M+  + +I
Sbjct: 361 SQTGQAIEVISITMGVYLLISLITSALMSLYSWRI 395


>gi|91763313|ref|ZP_01265277.1| amino acid ABC transporter [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717726|gb|EAS84377.1| amino acid ABC transporter [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 381

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/382 (41%), Positives = 230/382 (60%), Gaps = 7/382 (1%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
           M++  I  Q++  L + +IF +   N   NM+   +  G GFL++ A F+I   ++ Y  
Sbjct: 1   MKLKKILPQLLTLLFIVLIFGFFTMNAQENMDTRGIQFGFGFLTQEASFDIQFSLIDYDG 60

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             SYA A LVG +NT  +AF G+I AT++G +VG  RLS N L+      Y+E FRN+P 
Sbjct: 61  SHSYARAYLVGLLNTLLVAFIGIILATLLGLIVGVARLSPNYLIRKTASFYIEFFRNVPL 120

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ IFF Y + L  LP+P  + +L    F+  +GL  P   + TN  IF  + +  ++L 
Sbjct: 121 LLQIFFWYFAALRALPMPQDATLLLGSSFMTIKGLYTPA-PIWTNFDIFFTTLIAAMILI 179

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFNF 256
            F  + ++   E+ GK LP+L +S  +  GLP L  +     L F  P L       + F
Sbjct: 180 FFFVKFAKKKQEQEGKQLPVLIVSLAIFIGLPLLTFLVGGVDLSFSFPELRKMSQSSYTF 239

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  + PE ++L +AL+ YTA FIAE VR+G+  + +GQ EAA ++GLT  +  +LV++
Sbjct: 240 DGGMGIPPELIALTLALTLYTATFIAENVRAGIQGIGKGQKEAAASIGLTPSQVLKLVIM 299

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQA+R IIPP T+QYLNL KNSSLA A+ + DLV V  GT + QTG+AIEI+ I M  YL
Sbjct: 300 PQALRIIIPPTTNQYLNLTKNSSLAAAIAYPDLVLVFAGTAMMQTGKAIEIVGITMATYL 359

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           ++SI I+L MN  N +IA+KEK
Sbjct: 360 TISIAISLLMNWYNQRIAIKEK 381


>gi|148255315|ref|YP_001239900.1| putative amino acid transport protein, permease [Bradyrhizobium sp.
           BTAi1]
 gi|146407488|gb|ABQ35994.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 383

 Score =  264 bits (675), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 154/361 (42%), Positives = 228/361 (63%), Gaps = 5/361 (1%)

Query: 31  IILALLLTVIFLWC----VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYA 86
           +IL +L   + +W     V N  +N+    ++ G GFL+  AGF+++Q ++ Y+   SY+
Sbjct: 11  VILQILFVAVLVWVGYEIVANARSNLAAQRITSGFGFLNNTAGFDVNQALISYSGSDSYS 70

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +LVG +NT  ++  G++ +TI+G LV  GRLS N L++ +   YVE+ RN+P L  I 
Sbjct: 71  RVLLVGILNTLLVSVIGIVLSTILGFLVALGRLSPNVLLSRVSGAYVELIRNLPLLFQIL 130

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F Y +VLS LP P  SI L    FLNNRG   P    +     F+ +    IV+SL    
Sbjct: 131 FWYLAVLSALPGPRQSISLFSTFFLNNRGFIVPRPIEEPGLTPFLIALGAAIVVSLGLRY 190

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R      G A+ +      L+ GLP + ++     + F+ PVL  FNF GGS + PE 
Sbjct: 191 YARRELFVRGHAMRIWPYVLGLLVGLPLMAMLMFGVPVAFEVPVLKGFNFAGGSRIIPEL 250

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L +AL+ YTA+FIAE+VR G+++V +GQMEA ++LGL+     RL+++PQA+R I+PP
Sbjct: 251 VALTVALTMYTASFIAEVVRGGILSVHKGQMEAGLSLGLSRGTVLRLIVVPQALRVILPP 310

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LT+QYLNL KNSSLAVA+G+ DLVSV  GT ++QTGQAIEII I M +YL++S++ +  M
Sbjct: 311 LTNQYLNLTKNSSLAVAIGYPDLVSVFAGTTMSQTGQAIEIIAITMGVYLAISLITSAMM 370

Query: 386 N 386
           +
Sbjct: 371 S 371


>gi|163733775|ref|ZP_02141217.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter litoralis Och 149]
 gi|161392886|gb|EDQ17213.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter litoralis Och 149]
          Length = 389

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/386 (41%), Positives = 230/386 (59%), Gaps = 10/386 (2%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q I  L L V   +  NN+  N+    L++  GFL + AG++I+Q ++ Y 
Sbjct: 5   DTRYRSMTFQAIALLALIVAIAYLANNLLTNLAAQGLNISYGFLGDPAGYDINQRLIEYD 64

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS A A +VG +NT  +AF   I AT+ G + G  RLS N LVA +   YVE+FRNIP
Sbjct: 65  SQSSNARAAVVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVAKLMSFYVEIFRNIP 124

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFVFS 193
            L+ I  ++  + +V+P P      +    +  G F   NRG+  P       + + V +
Sbjct: 125 VLIWIIIIFTIMTAVMPAPRAFRGDEPEATMLLGAFAFTNRGIYIPAPIWGPGSMVVVAT 184

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLG 252
           F+  IV      R + +   +TG+ LP+ + S   IF +PT+V+   +   +  D PVLG
Sbjct: 185 FIASIVGVFAYRRYATNLLYETGRLLPMGWPS-LAIFFVPTIVMFFIMGRPVGLDMPVLG 243

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FNF GG  +    ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL   +   
Sbjct: 244 GFNFQGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAASALGLRPGRVMN 303

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWM 371
           LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+  ++GG  +NQTG+AIE +L+ M
Sbjct: 304 LVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVLLLM 363

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
             YL +S+ I+  MN  N  + LKE+
Sbjct: 364 LFYLVISLSISAIMNVYNKTVTLKER 389


>gi|262404013|ref|ZP_06080568.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
 gi|262349045|gb|EEY98183.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
          Length = 401

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 166/394 (42%), Positives = 228/394 (57%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A +    +   +  LY+    ++  Q+I    L       VNN  NN+E   ++ G  FL
Sbjct: 8   ASQPSDAHSKHVNLLYNPTFRSVLFQLIAVCALGFFLYTIVNNALNNLESRGIATGFAFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
              AGF I Q +V Y    SY    LVG +NT  ++  G+  AT++G  +G  RLS N L
Sbjct: 68  DHVAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIFFATLLGFALGIARLSTNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           ++ +  VY+E FRNIP L+ IFF Y  VL  LP   +S+ L   ++LN +GL       +
Sbjct: 128 ISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKNSMHLGEWLYLNVKGLYLAKPIFE 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + +     S ++GI      +  + +    TG+  P+         G P LV   L   +
Sbjct: 188 SGSLWVFISLLMGIAACWLLSIWANNRQRLTGQQTPMGRYILIGCVGFPLLVYFLLGQPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P L  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SAEYPALRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPRSKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 368 IEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|308188312|ref|YP_003932443.1| amino-acid ABC transporter permease protein yhdX [Pantoea vagans
           C9-1]
 gi|308058822|gb|ADO10994.1| Putative amino-acid ABC transporter permease protein yhdX [Pantoea
           vagans C9-1]
          Length = 392

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 160/367 (43%), Positives = 227/367 (61%), Gaps = 3/367 (0%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           I+A+L  V +L  V+N   N+    ++ G GFL   AGF I Q ++ YT   +YA   LV
Sbjct: 28  IVAVLGVVGYL--VHNTIINLANRGITSGFGFLERTAGFGIVQHLIEYTEGDTYARVFLV 85

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  ++   ++ A+I+G  VG  RLS N L+  +  +Y+E FRNIPPL+ IFF Y +
Sbjct: 86  GLTNTLLVSALCIVFASILGFAVGLARLSDNWLLRKLSNIYIETFRNIPPLLQIFFWYFA 145

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           VL  LP P  ++      +++NRGL  P  T    +  FV + +L + +S    R +R  
Sbjct: 146 VLRNLPGPRQALNAFDLAYVSNRGLYVPWPTYAPGSWPFVIALLLAVAVSYGLYRFNRQH 205

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             KTG+       +  ++   P L  +      H+D P L  FNF GGS + PE  +L +
Sbjct: 206 QLKTGELRRTWPAAAAMLILFPLLAHLGFGAATHWDVPQLRGFNFRGGSVMIPELAALTL 265

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS YT++FIAE++RSG+ +VP GQ EAA +LGL +    R V++PQAMR IIPPLTSQY
Sbjct: 266 ALSIYTSSFIAEVIRSGIQSVPHGQHEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTSQY 325

Query: 332 LNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           LN++KNSSLA A+G+ D+VS+  G+++NQTGQAIE I I M +YL +S++I+L MN  N 
Sbjct: 326 LNIVKNSSLAAAIGYPDMVSLFAGSVLNQTGQAIETIAITMGVYLIISLLISLLMNFYNR 385

Query: 391 KIALKEK 397
           KIAL E+
Sbjct: 386 KIALVER 392


>gi|262171610|ref|ZP_06039288.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|261892686|gb|EEY38672.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
          Length = 401

 Score =  262 bits (670), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 171/398 (42%), Positives = 230/398 (57%), Gaps = 9/398 (2%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A +    +      LY+        Q +    L+      VNN  NN+E   ++ G  FL
Sbjct: 8   ASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFAFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
              AGF I Q +V Y    SY    LVG +NT  ++  G+I AT++G ++G  RLS N L
Sbjct: 68  DHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           ++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ L   ++LN +GL       +
Sbjct: 128 ISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPVFE 187

Query: 185 TNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +   + + + GI    VLS++A    R     TG+  P+           P LV  AL
Sbjct: 188 AGSLWVLIALLAGITFCWVLSIWANNRQR----LTGQQTPMGRYVLICCVVFPLLVYFAL 243

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  + PVL  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA
Sbjct: 244 GQPISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAA 303

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
           ++LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQ
Sbjct: 304 MSLGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQ 363

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TGQAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 364 TGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|258627557|ref|ZP_05722334.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258580139|gb|EEW05111.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
          Length = 401

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 171/398 (42%), Positives = 230/398 (57%), Gaps = 9/398 (2%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A +    +      LY+        Q +    L+      VNN  NN+E   ++ G  FL
Sbjct: 8   ASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFAFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
              AGF I Q +V Y    SY    LVG +NT  ++  G+I AT++G ++G  RLS N L
Sbjct: 68  DHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           ++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ L   ++LN +GL       +
Sbjct: 128 ISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPVFE 187

Query: 185 TNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +   + + + GI    VLS++A    R     TG+  P+           P LV  AL
Sbjct: 188 AGSLWVLIALLAGIAFCWVLSIWANNRQR----LTGQQTPMGRYVLICCVVFPLLVYFAL 243

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  + PVL  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA
Sbjct: 244 GQPISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAA 303

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
           ++LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQ
Sbjct: 304 MSLGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQ 363

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TGQAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 364 TGQAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|254488695|ref|ZP_05101900.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter sp. GAI101]
 gi|214045564|gb|EEB86202.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter sp. GAI101]
          Length = 404

 Score =  262 bits (669), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 158/389 (40%), Positives = 231/389 (59%), Gaps = 10/389 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L D R  + + Q I  +LL  +  +   N+  N+ ++ L++   FL   AG++I+Q ++
Sbjct: 17  LLNDTRYRSYTFQFIALMLLIALMAFLGINLVRNLAEAGLNISYDFLGVPAGYDINQTLI 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S S+   A +VG +NT  +AF   + ATI+G + G  RLS N LV+ +  VYVE+FR
Sbjct: 77  DYNSQSTNLRAAVVGIINTLLVAFLACLTATILGVIAGVARLSNNWLVSKLMAVYVEIFR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH------SIVLPFGMF-LNNRGLSFPTLTMDTNAKIF 190
           NIP L+ I  +Y  + +VLP P+       S  + F  F   NRG+  P       + I 
Sbjct: 137 NIPVLIWILMIYTLMTAVLPAPNAFRGDNPSSSMLFDAFAFTNRGVYIPAPVWGPGSMIV 196

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDKP 249
           V +F L I+      R +     +TGK LPL +  T  I  +PTL V   +   +  D P
Sbjct: 197 VATFTLSIIAVFLYRRYAVKLLFETGKLLPLGW-PTLAILIVPTLLVFFVMGSPIGLDYP 255

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG  +    ++L++ALS YT AFIAE VR+G+ A+ +GQ EAA +LGL  ++
Sbjct: 256 ALRGFNFQGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISKGQTEAAASLGLRPKR 315

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIIL 368
              LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+  ++GG  +NQTG+AIE +L
Sbjct: 316 VMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVL 375

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M  YL++S+ I+  MN  N  ++LKE+
Sbjct: 376 LLMLFYLTISLSISAIMNVYNNNVSLKER 404


>gi|84515668|ref|ZP_01003029.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Loktanella vestfoldensis SKA53]
 gi|84510110|gb|EAQ06566.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Loktanella vestfoldensis SKA53]
          Length = 404

 Score =  262 bits (669), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 156/389 (40%), Positives = 230/389 (59%), Gaps = 10/389 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            LYD R  ++++Q++ A+L+ +     V+N   N+      +   FL   AG++I+Q I+
Sbjct: 17  LLYDARYRSLTIQVVAAMLIMLFLAQLVDNTVTNLAVLGKDISFSFLWSTAGYDINQQII 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+TS  ++A A LVG +NT  +A  G I AT+IG   G  RLS N LVA +   YVE  R
Sbjct: 77  PFTSQDTHARAALVGILNTLLVAVLGCILATVIGVFAGVLRLSKNWLVARVMTFYVECMR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH-------SIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           N P L+ I  ++  +    P P         ++V    + + NRG+  P       + I 
Sbjct: 137 NTPLLIWILIVFAVMTEATPQPRDFREGGTAAMVFADSVAVTNRGVFIPRPIWADGSGIV 196

Query: 191 VFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           V   +L I+  +F  R ++R   E TG+ LP+L +S  ++    TL   A+   +  + P
Sbjct: 197 VAFLILSII-GIFVLRYVARKRQEDTGQQLPVLRLSLAMLIVPVTLAFFAVGRPITLEYP 255

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG FNF GG  V   F++L++ALS YT+AFIAEIVRSG++AV +GQ EAA ALG+   +
Sbjct: 256 ELGGFNFEGGLQVRNSFIALWLALSLYTSAFIAEIVRSGILAVSKGQTEAAFALGMQPNR 315

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIIL 368
             +L++LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D  S +GG  +NQTG+ +E IL
Sbjct: 316 TMQLIILPQALRVIIPPLISQFLNLTKNSSLALAVGYMDARSTLGGITVNQTGRELEGIL 375

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    YL  S++I+  MN  N+ + LKE+
Sbjct: 376 LLGIFYLITSLIISSAMNFYNSGVKLKER 404


>gi|157148849|ref|YP_001456168.1| hypothetical protein CKO_04682 [Citrobacter koseri ATCC BAA-895]
 gi|157086054|gb|ABV15732.1| hypothetical protein CKO_04682 [Citrobacter koseri ATCC BAA-895]
          Length = 393

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 224/369 (60%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  + ++ ++N  NN+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVIAVVSVAVYLIHNTINNLSSRGITSGFAFLDRSAGFGIVQHLIDYEQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 85  LVGLLNTLLVSALCIVFASFLGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     +FL+NRGL  P   +      F  + +L IV+S    R ++
Sbjct: 145 FAVLRNLPGPRQAVSALDLVFLSNRGLYIPAPQLGEGVIAFCVAILLAIVISTGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+       +  LI  LP +        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 THQIKTGQLRRTWPTALALIVLLPAVAQWLFGAALHWDVPELRGFNFRGGMALIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+RSG+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRSGIQAVPHGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IAL E+
Sbjct: 385 NRRIALIER 393


>gi|156741439|ref|YP_001431568.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
 gi|156232767|gb|ABU57550.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
          Length = 396

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 159/398 (39%), Positives = 246/398 (61%), Gaps = 13/398 (3%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
           R T     SR  F  D R   I++QI+   L+  +    + N+  ++ +  L+LG  FL+
Sbjct: 6   RPTSPLRLSR-AFWRDERFIQIAIQILFLALVIWVGSVALRNMLTSLRQQGLALGFDFLN 64

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
             AGF+I   ++ Y+S  ++A A+ VG +NT  ++  G++ AT++G +VG  RLS+N LV
Sbjct: 65  SGAGFDISDALIAYSSSDTFARALQVGLLNTVVVSLLGIVLATLLGIVVGVARLSSNWLV 124

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-VLPFGMFLNNRGLSFP----T 180
             +  V+VE+ RN+P LV++ F+Y +    LP    ++ + P  ++L+NRG++ P    T
Sbjct: 125 NRMAWVFVEIMRNVPLLVLLVFIYTAFFLKLPRARQAVNIGP--VYLSNRGVAVPWGEPT 182

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T      + V + + G ++     R    + E++G+  PL++ S   I  +  +  +AL
Sbjct: 183 DTWSLYMSVLVGALIAGALVGFAMHR----WQEQSGRPRPLVWFSLLTIAVIAMVGWVAL 238

Query: 241 -KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            +  L    P +  FNF GG  +SPEFM+L I L  YTA FI E+VR+G+ AVP+GQ+EA
Sbjct: 239 PQPPLILSYPEIAGFNFQGGRVLSPEFMALLIGLVLYTAGFIGEVVRAGIQAVPKGQVEA 298

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGLT  +  RLV+ PQA+R IIPP+T+QYLNL KNS+LAVA+G+ DL +V GTIINQ
Sbjct: 299 ARALGLTPSRTLRLVVFPQALRLIIPPITNQYLNLTKNSTLAVAIGYPDLFAVSGTIINQ 358

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG+A+E+I + M +YL LS++ +L MN  N ++ L E+
Sbjct: 359 TGRAVEMIAVVMAVYLILSLLTSLIMNWYNRRVRLVER 396


>gi|110678762|ref|YP_681769.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter denitrificans OCh 114]
 gi|109454878|gb|ABG31083.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter denitrificans OCh 114]
          Length = 404

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 159/388 (40%), Positives = 231/388 (59%), Gaps = 10/388 (2%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D R  +I+ Q I  L L V   +  NN++ N+    L++  GFL + AG++I+Q ++ 
Sbjct: 18  LNDTRYRSITFQAIALLALIVAIAYLANNLFTNLAAQGLNISYGFLGDPAGYDINQRLIE 77

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y S SS A A LVG +NT  +AF   I AT+ G + G  RLS N LV+ +   YVE+FRN
Sbjct: 78  YDSQSSNARAALVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVSKLMSFYVEIFRN 137

Query: 139 IPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFV 191
           IP L+ I  ++  + +V+P P      +    +  G F   NRG+  P       + + V
Sbjct: 138 IPVLIWIIIIFTIMTAVMPAPRAFRGDEPEATMLLGAFAFTNRGIYIPAPIWGPGSMVVV 197

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPV 250
            +F+  +V      R +++   +TG+ LP+ + S   IF +PT+V+   +   +  D P 
Sbjct: 198 ATFIASVVGVFAYRRYAKNLLYQTGRLLPMGWPS-LAIFFVPTIVMFFIMGRPIGLDIPE 256

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FNF GG  +    ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL   + 
Sbjct: 257 LGGFNFRGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAASALGLHPGRV 316

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILI 369
             LV+LPQA+R IIPPL S YLN+ KNSSLA+AVG+AD+  ++GG  +NQTG+AIE +L+
Sbjct: 317 MNLVVLPQALRVIIPPLISHYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVLL 376

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M  YL +S+ I+  MN  N  + LKE+
Sbjct: 377 LMLFYLVISLSISAIMNVYNKTVTLKER 404


>gi|167041375|gb|ABZ06128.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_005K23]
          Length = 399

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 165/375 (44%), Positives = 227/375 (60%), Gaps = 8/375 (2%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID-QGIVPYTSDSSYATA 88
           Q ++   +  IF +   N   NM+   +  G+ FL E + F+I     V Y    SYATA
Sbjct: 26  QALVVFFIVFIFGYFSYNAQVNMDNRGIDFGLRFLGEESSFDIQFTPFVEYDGTKSYATA 85

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            LVG +NT  ++  G+  ATI+G +VG  RLS N L+A +  +YVE+FRN+P L+ +FF 
Sbjct: 86  YLVGLINTIIVSLVGIFFATILGVVVGISRLSPNYLIAKMSEIYVEIFRNVPLLLQLFFW 145

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y + L  LP+P  +I      FL+ +G   P     TN  +F  S +  I++  F  R  
Sbjct: 146 YFTALRALPLPKDAISFFDVSFLSIKGFYVPRFIW-TNGSLFFVSIIASIIVIFFLLRFF 204

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-----FNFIGGSTVS 263
           +   E+TGK  P  +IS  +I  LP L  +     L F+ P L Q     +NF GG ++ 
Sbjct: 205 KKKQEQTGKQYPKFFISLTIITVLPFLTFLIGGVSLDFEYPELKQLSKTIYNFKGGISII 264

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE M+L +ALS YTA FIAE VR+G+  + RGQ EAA ++GLT  +A +LV++PQA+R I
Sbjct: 265 PELMALALALSLYTATFIAECVRAGIEGISRGQKEAAASIGLTPGQALKLVIMPQALRII 324

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           IPP T+QYLNL KNSSLA A+ + D+V V  GT + QTG+AIEII I M  YL+LSI I+
Sbjct: 325 IPPTTNQYLNLTKNSSLAAAIAYPDIVLVFAGTALMQTGRAIEIISITMLTYLTLSISIS 384

Query: 383 LFMNRLNAKIALKEK 397
           +FMN  N KIA+KEK
Sbjct: 385 IFMNWYNKKIAIKEK 399


>gi|260223279|emb|CBA33682.1| General L-amino acid transport system permease protein aapQ
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 369

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/353 (40%), Positives = 212/353 (60%), Gaps = 3/353 (0%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +N   NM+   +  G  FL+  AGF+I +    + S  SY  A LVGFVNT  +A  G++
Sbjct: 19  HNTTTNMKLRGIQSGFDFLTGPAGFDIGESFFAFDSGESYWRAYLVGFVNTLRVAVVGIV 78

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
             T++GTL+G GR S N L+  +C  YVE FRNIP L+ +   Y     VLP  +  +VL
Sbjct: 79  LTTLLGTLIGVGRFSRNALIRGLCSAYVEFFRNIPVLLQLLMWYLMFTEVLPASNEPLVL 138

Query: 166 -PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
            PF  FL+  GL+FP     T      +  + G++ ++     ++   E+TG+   + + 
Sbjct: 139 GPF--FLSKGGLNFPIPEWATGHVWGAWGLLAGVIGAVLYRSYAKKSFEQTGRVKSMFWT 196

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G   L  +        + PV G+F    G  ++PE++S+ + L+ YTAAF++E+
Sbjct: 197 PLAIVLGAGILGWLLGGAPTALNMPVQGEFAIENGGALTPEYLSVLLGLTIYTAAFVSEV 256

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR G+ +V  GQ EAA ALGL+  +  RLV+LPQA+R IIPP+T+QYLNL KNSSLAVA+
Sbjct: 257 VRGGIQSVALGQSEAAAALGLSRGQTMRLVMLPQALRVIIPPVTNQYLNLTKNSSLAVAI 316

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G+ D+VS+  T INQTG+A+E I I M +YLS S+  ++ MN  N + A+KE+
Sbjct: 317 GYPDVVSIANTAINQTGRAVECIAIIMLVYLSTSLFTSITMNWYNTRSAIKER 369


>gi|322834719|ref|YP_004214746.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169920|gb|ADW75619.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 392

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/370 (41%), Positives = 224/370 (60%), Gaps = 3/370 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI   +LL     + ++N   N+    ++ G  FL + AGF I Q ++ Y    +YA   
Sbjct: 24  QIFAVVLLVACLGYLLHNTITNLTTRGITSGFAFLEKGAGFGIVQHLIDYQEGDTYARVF 83

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++G +NT  ++   ++ A+I+G ++G GRLS N L+  +  VY+E FRNIPPL+ IFF Y
Sbjct: 84  VIGLLNTLLVSALCIVFASILGFIIGLGRLSDNWLIRKVSTVYIETFRNIPPLLQIFFWY 143

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  S+      F++NRGL  P+  +   + +  F  VL  +  + A +   
Sbjct: 144 FAVLRNLPGPRQSLNAFDLAFVSNRGLYLPSPELAPGS-LAGFIAVLLAIFGIIALQRYN 202

Query: 210 HFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           HF +  TG+   +   +  ++   P L  +     LH+D P L  FNF GG  + PE  +
Sbjct: 203 HFRQIHTGRIWHIWPWAIVMLVVFPALAHLIFGPALHWDVPALRGFNFRGGMVLIPELAA 262

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L +ALS YT+ FIAE++RSG+ +V  GQ EAA +LGL +    R V+LPQAMR IIPPLT
Sbjct: 263 LTLALSVYTSTFIAEVIRSGIQSVSHGQHEAARSLGLPNPVTLRQVILPQAMRVIIPPLT 322

Query: 329 SQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           SQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+  MN 
Sbjct: 323 SQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLAISFLMNI 382

Query: 388 LNAKIALKEK 397
            N +IAL E+
Sbjct: 383 YNRRIALVER 392


>gi|227327915|ref|ZP_03831939.1| L-amino acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 392

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/356 (43%), Positives = 221/356 (62%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+ +  ++ G  FL++ AGF I Q ++ Y    +YA   +VG  NT  ++  
Sbjct: 37  YLLHNTVTNLAQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARVFVVGLFNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+I+G  VG  RLS N L+  I  +Y+E+FRNIPPL+ IFF Y +VL  LP P  S
Sbjct: 97  CIVFASILGFTVGLARLSDNWLLRKISNIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQS 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           I      FL+NRG   P+  +   A  F  S ++  +++    R ++ +H  TG+     
Sbjct: 157 ISAFDVAFLSNRGFYLPSPELGPGAAAFFLSLLITAIVTWVVFRRNKRYHALTGQPRRTW 216

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            ++  L   L TL  +      H+D P L  FNF GG  + PE  +L +ALS YT++FIA
Sbjct: 217 PLTLGLFLVLCTLSHLIFGPAFHWDMPELKGFNFRGGMVLIPELAALTVALSVYTSSFIA 276

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+RSG+ +V  GQ EAA +LGL +    R V+LPQA+R IIPPLTSQYLN++KNSSLA 
Sbjct: 277 EIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSSLAA 336

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNLYNRKIALVER 392


>gi|27378023|ref|NP_769552.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27351169|dbj|BAC48177.1| blr2912 [Bradyrhizobium japonicum USDA 110]
          Length = 395

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/359 (42%), Positives = 215/359 (59%), Gaps = 3/359 (0%)

Query: 39  VIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFW 98
           + FLW  +N   N+    ++ G  FL   AG  I   ++ Y    +Y  A +VG VNT  
Sbjct: 40  IAFLW--SNTVTNLSARRITTGFAFLGREAGMPIADSLLAYNPRDTYLWAFVVGIVNTLR 97

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ ATI+GTL+G  RLSAN L++ +  VYVE  R+IP L+ + F Y  ++  LP 
Sbjct: 98  VAVIGIVLATILGTLIGISRLSANWLLSRLAAVYVETLRDIPLLLQLLFWY-VLMQGLPA 156

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
              +     G+FL+NRGL  P + +       + +  LG  +     R       + GK 
Sbjct: 157 ARAAFRPLEGVFLSNRGLILPAIPIGAPQLWVLGTAALGCAVFYVFRRWQIAQQMRDGKP 216

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                 +  LI  LP  V + L      + P L  FNF+GG T++PE+ +L IAL  YT+
Sbjct: 217 RSAWPFALGLIVMLPAAVSVLLGVPWAIEWPELRGFNFVGGLTLAPEYFALLIALVAYTS 276

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAEIVRSG+ +VPRGQ +AA ALGL      R ++LPQA+R I+PP+TSQYLNL KNS
Sbjct: 277 AFIAEIVRSGIQSVPRGQWDAANALGLRRSFMLRQIILPQALRVIVPPMTSQYLNLTKNS 336

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SLAVA+G+ D+VSV  T +NQTGQAIE I + M ++L++S+ I+ FMN  NA+IAL E+
Sbjct: 337 SLAVAIGYQDVVSVANTTLNQTGQAIEAIALIMAVFLTISLGISFFMNWYNARIALVER 395


>gi|219847286|ref|YP_002461719.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus aggregans DSM 9485]
 gi|219541545|gb|ACL23283.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus aggregans DSM 9485]
          Length = 400

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 166/392 (42%), Positives = 235/392 (59%), Gaps = 16/392 (4%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           + F  D R+  I VQ++ AL +  +  +  +N+ N + ++NL     FLS  AGF I + 
Sbjct: 15  IPFYRDTRIIAIIVQVVFALAVVALLWYLYSNMMNGLRQANLLPTFAFLSVPAGFPISES 74

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y    +Y  A +VG +NT  +A  G+I AT++G ++G  RLS N L+  +  VYVE+
Sbjct: 75  VIEYDPSKTYGQAFIVGILNTIRVAGIGIILATLLGLILGIARLSDNWLLRNVALVYVEI 134

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVF- 192
            RNIP L+ + F + S+  + P    SI +   MFL+NRG  L++P    D +  ++   
Sbjct: 135 VRNIPLLLQLIFWF-SLTRLFPRIQESIEVGGLMFLHNRGVTLAWPQTANDFDKWMWWVY 193

Query: 193 -SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV- 250
              V+GI+  +   R+     ++ G ALP   +  F I     LV   L Y L+   PV 
Sbjct: 194 GGIVIGIIFYV-VRRIQFARRDRPGVALPYAILIAFAI----ALVGFLLSYVLYGAWPVS 248

Query: 251 -----LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                L +FNF+GG TV+  F +L + L  YTA FI EIVRSG++AV +GQ EAA ALGL
Sbjct: 249 LSIPELQRFNFVGGITVTNSFAALLVGLVIYTAVFIGEIVRSGILAVSKGQREAARALGL 308

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +  RLV+LPQA+R IIPPLTSQYLNL KNSSLA+AV + DL  V  TI NQTGQA+ 
Sbjct: 309 TPGQTMRLVILPQALRVIIPPLTSQYLNLTKNSSLAIAVAYPDLFYVANTINNQTGQAVP 368

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +IL+ M  YLS+S++ +LFMN  N +I L E+
Sbjct: 369 VILMLMVSYLSVSLLTSLFMNWYNRRIQLVER 400


>gi|261819588|ref|YP_003257694.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261603601|gb|ACX86087.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 392

 Score =  259 bits (663), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 162/379 (42%), Positives = 230/379 (60%), Gaps = 21/379 (5%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII+ + +  I  + ++N   N+ +  ++ G  FL++ AGF I Q ++ Y    +YA   
Sbjct: 24  QIIVVITVLAIAAYLLHNTVTNLAQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARVF 83

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG  NT  ++   ++ A+I+G  +G  RLS N L+  I  +Y+E+FRNIPPL+ IFF Y
Sbjct: 84  LVGLFNTLLVSALCIVFASILGFTIGLARLSDNWLLRKISNIYIEIFRNIPPLLQIFFWY 143

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  SI      FL+NRG   P+  M      F  S ++ +V++    R ++
Sbjct: 144 FAVLRNLPGPRQSISAFDIAFLSNRGFYLPSPEMGPGTAAFFLSLLITLVVTWAVLRRNQ 203

Query: 210 HFHEKTGKA----------LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
            +H  TG+           L +L   + LIFG P           H+D P L  FNF GG
Sbjct: 204 RYHALTGQVRRTWPLTLGLLLVLCALSHLIFG-PAF---------HWDVPELKGFNFRGG 253

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA +LGL +    R V+LPQA
Sbjct: 254 MVLIPELAALTVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQA 313

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLS 378
           +R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S
Sbjct: 314 LRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIIS 373

Query: 379 IMIALFMNRLNAKIALKEK 397
           ++I+L MN  N KIAL E+
Sbjct: 374 LLISLLMNLYNRKIALVER 392


>gi|56697222|ref|YP_167587.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
 gi|56678959|gb|AAV95625.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
          Length = 390

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 150/370 (40%), Positives = 229/370 (61%), Gaps = 4/370 (1%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87
            V +++  +L V+F    +N   N+    +  G  FL   AG  I   ++ Y+   SY  
Sbjct: 25  GVLVVVIAILYVLF----SNTQENLAIRGIESGFAFLGHEAGLPIGDSLIDYSPTRSYGY 80

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A LVG +NT +++   ++ +T++G ++G  R+S N L+A    +YVE  RN+P L+ +FF
Sbjct: 81  AFLVGILNTLFVSVLAIVFSTLLGIVIGVARVSRNWLLAKGAAIYVETLRNLPLLLTLFF 140

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y  VL+ LP P  +I L  G+FL+ RG   P    +    +F+ +  + +VL++   R 
Sbjct: 141 IYTVVLAALPHPRDAIALSEGVFLSKRGFYLPRPVAEDGIGLFLGASAVALVLAVMFWRW 200

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++ +  +TG+++P L     +   L  L  +A    L  + PV   FNF GG ++ PEF 
Sbjct: 201 AKSYKVRTGRSVPGLRGGLAIFLALSGLAFLASGQPLTSELPVYKGFNFKGGLSIKPEFA 260

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           SL I L  YTAA++AE VRSG+ +V  GQ+EAA ALG++    TR+VLLPQA+R  IP  
Sbjct: 261 SLLIGLVLYTAAYVAENVRSGIQSVHAGQIEAANALGVSSGVVTRMVLLPQALRVTIPAT 320

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T+ Y +L+KNSSLAVA+G+ D+VSVGGTII Q GQAIEII +WM +YL+++++I+L MN 
Sbjct: 321 TNDYASLVKNSSLAVAIGYPDMVSVGGTIIGQNGQAIEIIAMWMAVYLTINLIISLGMNM 380

Query: 388 LNAKIALKEK 397
           LNA++ L E+
Sbjct: 381 LNARVQLVER 390


>gi|188532410|ref|YP_001906207.1| Hypothetical amino-acid ABC transporter permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188027452|emb|CAO95299.1| Hypothetical amino-acid ABC transporter permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 392

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 155/356 (43%), Positives = 216/356 (60%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N  NN+    ++ G GFL   AGF I Q ++ YT   SYA   LVG  NT  ++  
Sbjct: 37  YLIHNTINNLASRGITSGFGFLERSAGFGIVQHLIDYTEGDSYARVFLVGLTNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            +  A+++G  VG  RLS N L+  +  VYVE FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CIFFASLLGFFVGLARLSDNWLLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P          F+ + +L I ++    R ++ +  KTG+     
Sbjct: 157 LNAFDLAFVSNRGLYVPWPEYAAGTVPFLLALLLAIAVTTVLFRYNKQYQLKTGRQRRTW 216

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +   +   P +  +     +H+D P L  FNF GG  + PE  +L +ALS YT+ FIA
Sbjct: 217 PAAVATLVMFPLVAFLLAGSPMHWDVPQLRGFNFRGGFVLIPELAALTLALSIYTSTFIA 276

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++RSG+ +VP GQ EAA +LGL H    R V++PQAMR IIPPLTSQYLN++KNSSLA 
Sbjct: 277 EVIRSGIQSVPHGQHEAASSLGLPHAATLRQVIIPQAMRVIIPPLTSQYLNVVKNSSLAA 336

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|84685381|ref|ZP_01013279.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666538|gb|EAQ13010.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Rhodobacterales bacterium HTCC2654]
          Length = 419

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 160/420 (38%), Positives = 240/420 (57%), Gaps = 42/420 (10%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R  + ++QI+  +   ++  W V+N   N+     S+G GFL+E AG++I+Q ++
Sbjct: 2   LIYDSRYRSATIQIVALIGFLLLIGWLVSNTVQNLADLGKSVGFGFLTEPAGYDINQRLL 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S  S+A A L+G +NT  +A  G I ATI+G +VG  RLS N LVA I  VYVE+FR
Sbjct: 62  DYDSRDSHARASLMGLLNTLLVAVLGCIMATIVGVIVGVLRLSNNWLVARIMTVYVEMFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH--------SIVLPFGMFLNNRGLSFPTL---TMDTN 186
           N+P L+ I F    ++  LP P          S++L   + L NRG+  P      MD  
Sbjct: 122 NVPVLLWIVFSMAILIETLPAPSAFRGDEPSASMLLGDSVALTNRGVYVPEPLFGRMDEE 181

Query: 187 AK----------------------------IFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                                         +F+ + + GI++S    + +      TG  
Sbjct: 182 GHPLTWRQGLGDIHLFGEAWFRFDVSLELVVFLSTLIAGILVSRLIGQRADRIQNSTGVR 241

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               ++   +I  +P+++++ L    +  KP L  FNF GG+ +   F++L++ALS YTA
Sbjct: 242 PKTFWLRAAVIV-VPSVIVLWL-MGFYLGKPALRGFNFDGGTHLRNSFIALWLALSLYTA 299

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAEIVR G++A+ +GQ EAA ALG+  R+   LV+LPQAMR IIPPL SQYLNL KNS
Sbjct: 300 AFIAEIVRGGILAISKGQTEAAAALGIRPRRIMSLVILPQAMRVIIPPLISQYLNLTKNS 359

Query: 339 SLAVAVGFADLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SLA+AVG+ DL  ++ G  +NQTG+ +E +++ M IYL++S+ I+  MN  N ++ LKE+
Sbjct: 360 SLAIAVGYMDLTGTLMGITLNQTGRELEAVMMTMLIYLAISLAISGAMNVYNNRVKLKER 419


>gi|209885182|ref|YP_002289039.1| general L-amino acid transport system permease protein AapQ
           [Oligotropha carboxidovorans OM5]
 gi|209873378|gb|ACI93174.1| general L-amino acid transport system permease protein AapQ
           [Oligotropha carboxidovorans OM5]
          Length = 401

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 157/369 (42%), Positives = 228/369 (61%), Gaps = 23/369 (6%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q++ A LL  +    V N   N++   ++ G GFLS  AGF + Q ++ Y+   SY    
Sbjct: 32  QVVFAALLAWLAYDIVTNAQANLQAQRVASGFGFLSSSAGFGVSQALISYSEADSYFRVF 91

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            VG +NT  ++  G++ AT+IG  V   RLS N L+A +   YVEV RN+P L  + F Y
Sbjct: 92  EVGLLNTLLVSAIGIVFATVIGFAVAIARLSPNWLLARLAAGYVEVIRNLPLLFQLLFWY 151

Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
            +VL+ LP P  S+ + FG+ FLNNRG   P +  +  A++F+ + V+ I+ SL    ++
Sbjct: 152 LAVLAALPNPRQSLSV-FGVAFLNNRGFVVPQMLAEPGARVFMVAIVVAIIASLAMVIVA 210

Query: 209 RHFHEKTGKALPL----------LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           R    + G+ L +          L + + ++FG P          + FD PVL  FNF G
Sbjct: 211 RRRLYRRGERLRIWPFVLVLLIGLPLLSIVLFGAP----------VRFDMPVLRGFNFAG 260

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++ E ++L I+LS YTAAFIAE+VR GL+AVP+GQ EA  +LGL+     RLV++PQ
Sbjct: 261 GMRITTELVALAISLSTYTAAFIAEVVRGGLLAVPKGQTEAGASLGLSRGAILRLVIIPQ 320

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           AMR I+PPLT+QYLNL+KNSSLAVA+G+ DL SV  GT ++QTGQA+EII + M +YL++
Sbjct: 321 AMRVILPPLTNQYLNLIKNSSLAVAIGYPDLFSVFAGTALSQTGQAVEIIAMTMAVYLAI 380

Query: 378 SIMIALFMN 386
           S++ +  MN
Sbjct: 381 SLVTSAIMN 389


>gi|238794643|ref|ZP_04638249.1| amino-acid ABC transporter permease protein yhdX [Yersinia
           intermedia ATCC 29909]
 gi|238726032|gb|EEQ17580.1| amino-acid ABC transporter permease protein yhdX [Yersinia
           intermedia ATCC 29909]
          Length = 392

 Score =  258 bits (660), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 162/396 (40%), Positives = 230/396 (58%), Gaps = 7/396 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     +  +N   N+    ++ G  F
Sbjct: 2   SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLFHNTITNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y    LVG +NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLLNTLLVSVLCIFFASILGFCLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLT 182
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S+   FG+ FL+NRGL  P+  
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLD-AFGVAFLSNRGLYLPSPE 176

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                   + + +L ++++L   R +      TG+      I   L+  LP +  +    
Sbjct: 177 FAAGFIPALLAVLLAVIITLALYRYNHFRQLHTGQFHRTWPIGLLLLIALPAVAHLLYGS 236

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +
Sbjct: 237 ALHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARS 296

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           L L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTG
Sbjct: 297 LALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTG 356

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 357 QAIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392


>gi|163848772|ref|YP_001636816.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus aurantiacus J-10-fl]
 gi|222526722|ref|YP_002571193.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus sp. Y-400-fl]
 gi|163670061|gb|ABY36427.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus aurantiacus J-10-fl]
 gi|222450601|gb|ACM54867.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus sp. Y-400-fl]
          Length = 400

 Score =  258 bits (660), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 165/388 (42%), Positives = 237/388 (61%), Gaps = 8/388 (2%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           + F  D R+  I VQ++ A+L+  +  +  +N+ N + ++NL     FLS  AGF I + 
Sbjct: 15  IPFYRDTRIIAIIVQVVFAILVIALVWFLYSNMINGLRQANLLPTFSFLSVPAGFPISES 74

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y    +Y  A +VG +NT  +A  G+I AT++G ++G  RLS N L+  +  VYVE+
Sbjct: 75  VIEYDPSMTYGRAFIVGILNTVRVAVIGIILATLLGLILGIARLSDNWLLRNVALVYVEI 134

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNA-KIFVF 192
            RN+P L+ + F + S+  + P    SI +   MFL+NRG  L++P    D +A  ++V+
Sbjct: 135 VRNVPLLLQLIFWF-SLTRLFPRIQESIDVGGLMFLHNRGITLAWPQAGNDFDAWMVWVY 193

Query: 193 S-FVLGIVLSLFATRLSRHFHEKTGKALP--LLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +  V+GIV  +   R+     ++ G ALP  LL      + G     L    + +    P
Sbjct: 194 AGIVIGIVFYV-VRRIQFVRRDRPGVALPYALLIALGVALLGFLVTYLTTGVWPVSLSIP 252

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           VL +FNF GG TV+  F +L I L  YTA FI EIVRSG++AV +GQ EAA ALGLT  +
Sbjct: 253 VLQRFNFDGGITVTNSFAALLIGLVIYTAVFIGEIVRSGILAVSKGQREAARALGLTPGQ 312

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA+R IIPPLTSQYLNL KNSSLA+A+ + DL  V  TI NQTGQA+ +IL+
Sbjct: 313 TMRLVILPQALRVIIPPLTSQYLNLTKNSSLAIAIAYPDLFYVANTINNQTGQAVPVILM 372

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M  YLS+S++ +LFMN  N +I L E+
Sbjct: 373 LMASYLSVSLLTSLFMNWYNRRIQLVER 400


>gi|283836182|ref|ZP_06355923.1| general amino acid ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291067533|gb|EFE05642.1| general amino acid ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 393

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 156/369 (42%), Positives = 222/369 (60%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q++  + +  I ++ ++N  NN+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QLLAVIAVISIAVYLIHNTINNLSSRGITSGFSFLDRSAGFGIVQHLIDYEQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  VY+E FRNIPPL+ IFF Y
Sbjct: 85  LVGLLNTLLVSALCIVFASFLGFFLGLARLSDNWLLRKLSTVYIETFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     MFL+NRGL  P   M      F  + ++ I ++    R +R
Sbjct: 145 FAVLRNLPGPRQAVNALDLMFLSNRGLYIPAPQMGEGLFAFCTAVLIAIAVTFGLFRFNR 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+       +  L   LP +        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 MHQIKTGQLRRTWPTALALFMFLPMISQWFFGAALHWDIPELRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNIY 384

Query: 389 NAKIALKEK 397
           N +IAL E+
Sbjct: 385 NRRIALIER 393


>gi|300898041|ref|ZP_07116412.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300358260|gb|EFJ74130.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
          Length = 323

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/323 (44%), Positives = 207/323 (64%), Gaps = 1/323 (0%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y    +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+
Sbjct: 1   MIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEI 60

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRNIPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V
Sbjct: 61  FRNIPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVV 120

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + IVLS+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FN
Sbjct: 121 MAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 180

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V+
Sbjct: 181 FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 240

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           +PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +Y
Sbjct: 241 IPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 300

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L +S+ I+L MN  N +IA+ E+
Sbjct: 301 LIISLTISLLMNIYNRRIAIVER 323


>gi|33596741|ref|NP_884384.1| ABC transporter transmembrane protein [Bordetella parapertussis
           12822]
 gi|33600509|ref|NP_888069.1| ABC transporter transmembrane protein [Bordetella bronchiseptica
           RB50]
 gi|33568108|emb|CAE32021.1| Putative ABC transport system, integral membrane protein
           [Bordetella bronchiseptica RB50]
 gi|33573442|emb|CAE37427.1| Putative ABC transport system, integral membrane protein
           [Bordetella parapertussis]
          Length = 403

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/385 (42%), Positives = 242/385 (62%), Gaps = 10/385 (2%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L+D +V  + +Q++LA LL  +    V+N   N++ +N++ G GFL+  AGF+I+Q ++P
Sbjct: 23  LHDRKVRGVLLQLLLAALLLWLGYVGVSNAVANLKAANIASGFGFLASTAGFDINQSLIP 82

Query: 79  YT-SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           Y+ + S+Y  A +VG +NT  +A  G++ AT+IG LVG  RLS+N +VA +  +YVE  R
Sbjct: 83  YSGATSTYGDAFVVGLLNTLLVAAIGIVLATLIGFLVGIARLSSNVVVAAVATLYVETLR 142

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N+P L+ IFF Y +VL  LP    S+ L   +FLNNRGL  P + +D  A    +   L 
Sbjct: 143 NLPLLLQIFFWYSAVLVALPAARESLHLADWVFLNNRGLYLPFVNIDGPA----WPLWLV 198

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL----IALKYQLHFDKPVLGQ 253
           + L++    L+R    +        Y +  +  GL  +VL    +A+      D P    
Sbjct: 199 LALAVLGYALARRLALRARLRGGRSYPARTMALGLFVVVLGGGLLAVDPAASLDLPRFRG 258

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F GG  + PE ++L +ALS YTAAFIAEIVR+G+ AV +GQ EAA+ALGL+ R    L
Sbjct: 259 FGFAGGLRIYPEMVALVVALSTYTAAFIAEIVRAGIGAVGQGQREAAVALGLSPRHTQSL 318

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V+ PQA+R IIPPLTSQ+LNL KNSSLAVA+ + DLV V  GT++NQTG+A+EI+ I M 
Sbjct: 319 VITPQALRVIIPPLTSQFLNLTKNSSLAVAIAYPDLVQVFMGTVLNQTGRAVEIVSITMA 378

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL++S++ +  M   N ++ L E+
Sbjct: 379 VYLAISLVTSALMGVYNRRVRLVER 403


>gi|87121083|ref|ZP_01076974.1| general amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
 gi|86163575|gb|EAQ64849.1| general amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
          Length = 391

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/354 (43%), Positives = 218/354 (61%), Gaps = 4/354 (1%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +N+  N+    +S G  FL++ AGF +   ++ YT   +Y  A +V  +NT  ++  G+I
Sbjct: 40  SNLQANLANQGISTGFEFLNQPAGFPVLIHLIEYTEADTYGRAFIVALINTIVISLMGII 99

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT+IG ++G  RLS N LVA +  VYVE  RNIP L+ +FF Y +VL+ LPIP +SI+ 
Sbjct: 100 LATVIGVVMGLARLSNNWLVARLATVYVETLRNIPLLLQMFFWYFAVLATLPIPKNSII- 158

Query: 166 PFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
            FG  FLN RG+  P           +  FV+ I+ S+     ++     TG   P  + 
Sbjct: 159 -FGDFFLNKRGIYSPNPLFQEGFGFVIAGFVISIIASIALIVWAKRRQTITGLWFPAYWA 217

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  LI  +  L L    + + FD P   +FN  GG  + PEF+++ +ALS YT AFIAEI
Sbjct: 218 SLGLIVVITFLALAISGFPIEFDLPQKSRFNVTGGMVLPPEFVAVLVALSTYTGAFIAEI 277

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+++V  GQ EAA +LGL      RL++LPQA+R IIPPLTSQ+LNL KNSSL  A+
Sbjct: 278 VRAGILSVNWGQTEAARSLGLKDSLTQRLIVLPQALRVIIPPLTSQFLNLAKNSSLGAAI 337

Query: 345 GFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + +LV+ V GT +NQTGQAIE I + M +Y +LS+ I++FMN  N K++L E+
Sbjct: 338 AYPELVAVVMGTTLNQTGQAIENIGLCMLVYGTLSLTISIFMNWYNKKMSLTER 391


>gi|253686634|ref|YP_003015824.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753212|gb|ACT11288.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 392

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/359 (43%), Positives = 222/359 (61%), Gaps = 7/359 (1%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+ +  ++ G  FL++ AGF I Q ++ Y    +YA   LVG  NT  ++  
Sbjct: 37  YLLHNTVTNLAQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARVFLVGLFNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+I+G  +G  RLS N L+  I  +Y+E+FRNIPPL+ IFF Y +VL  LP P  S
Sbjct: 97  CIVFASILGFTIGLARLSDNWLLRKISNIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQS 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG---KAL 219
           I      FL+NRG   P+  +   A  F  S ++ +V++    R ++ +H  TG   +  
Sbjct: 157 ISAFDVAFLSNRGFYLPSPELGPGAAAFFLSLIITLVVTWGVFRRNQRYHALTGQPRRTW 216

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL       +  L  L+  A     H+D P L  FNF GG  + PE  +L +ALS YT++
Sbjct: 217 PLALGLLLGLCALSHLIFGA---AFHWDMPELKGFNFRGGMVLIPELAALTVALSVYTSS 273

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAEI+RSG+ +V  GQ EAA +LGL +    R V+LPQA+R IIPPLTSQYLN++KNSS
Sbjct: 274 FIAEIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSS 333

Query: 340 LAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 334 LAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNLYNRKIALVER 392


>gi|330814053|ref|YP_004358292.1| glutamate Aspartate transport system permease protein GltJ
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487148|gb|AEA81553.1| glutamate Aspartate transport system permease protein GltJ
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 398

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 145/356 (40%), Positives = 219/356 (61%), Gaps = 6/356 (1%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N   NM    +  G GFL+ +A F+I   ++ + S+ SYA A LVG +NT  ++  G+  
Sbjct: 44  NASTNMAARGIETGFGFLANKASFDIQFSLIDFDSNDSYARAYLVGLLNTLLVSGIGIFF 103

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           AT+IG  VG  RLS+N L + +   Y+E+FRNIP L+ IFF Y ++L +LP  D+S++L 
Sbjct: 104 ATVIGFFVGVTRLSSNILASKVAEAYIEIFRNIPLLLQIFFWYFAILRLLPSSDNSLILF 163

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +F N +G+  P    + N   FV+ F+  I+        S+   EKTG  +P    S 
Sbjct: 164 NFVFANIKGIYVPRFVWE-NLNHFVYGFLFSILAIYLFVSFSKKKQEKTGVQVPTFTTSL 222

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            + F +  +V+      L    PVL    G +N++GG +V PE ++L  +LS YT+ FIA
Sbjct: 223 VIFFTINFIVIYFGNVGLSLSYPVLETNRGLYNYMGGVSVIPELIALAFSLSLYTSTFIA 282

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++ + +GQ EAA ++GL+  +  +L+++PQA+R IIPP+T+QYLNL KNSSLA 
Sbjct: 283 ECVRAGILGIDKGQKEAAASIGLSKGQILKLIVIPQALRIIIPPVTNQYLNLTKNSSLAA 342

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+ + D+V V  GT + QTG+AIEI+ I M  YL+LS+ I+L MN  N K ++ E+
Sbjct: 343 AIAYPDIVLVFAGTALMQTGKAIEIVSITMLTYLTLSVSISLLMNWYNKKNSIVER 398


>gi|227114000|ref|ZP_03827656.1| L-amino acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 392

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/366 (43%), Positives = 223/366 (60%), Gaps = 21/366 (5%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+ +  ++ G  FL++ AGF I Q ++ Y    +YA   LVG  NT  ++  
Sbjct: 37  YLLHNTVTNLSQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARIFLVGLFNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+I+G  VG  RLS N L+  I  VY+E+FRNIPPL+ IFF Y +VL  LP P  S
Sbjct: 97  CIVFASILGFTVGLARLSDNWLLRKISNVYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQS 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG---KAL 219
           I      FL+NRG   P+      A  F  S ++ +V++    R ++ +H  TG   +  
Sbjct: 157 ISAFDVAFLSNRGFYLPSPEWGPGAAAFFLSLIITLVVTWGVFRRNQRYHASTGQPRRTW 216

Query: 220 P-------LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           P       +L   + LIFG P           H+D P L  FNF GG  + PE  +L +A
Sbjct: 217 PLTLGLLLVLCALSHLIFG-PA---------FHWDMPELKGFNFRGGMVLIPELAALTVA 266

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS YT++FIAEI+RSG+ +V  GQ EAA +LGL +    R V+LPQA+R IIPPLTSQYL
Sbjct: 267 LSVYTSSFIAEIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQALRVIIPPLTSQYL 326

Query: 333 NLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           N++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L MN  N K
Sbjct: 327 NIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNLYNRK 386

Query: 392 IALKEK 397
           IAL E+
Sbjct: 387 IALVER 392


>gi|90424049|ref|YP_532419.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           BisB18]
 gi|90106063|gb|ABD88100.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris
           BisB18]
          Length = 401

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 164/389 (42%), Positives = 236/389 (60%), Gaps = 3/389 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVH--NISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   AR   T++ +R++ L   R     + +Q++    L  +    V+N   N+    ++
Sbjct: 1   MAIEARPPPTQFVARLRRLLGGRAGWGGLLLQVLFVAALVWVAYEIVDNARGNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY+   SY    LVG VNT  ++  G+I ATIIG +V  GR
Sbjct: 61  SGFGFMSQTAGFGVSQALIPYSEADSYTRVFLVGLVNTLVVSIIGIIFATIIGFMVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ +    FL+NRG+  
Sbjct: 121 LSPNWLLSKISGGYVELVRNLPLLFQILFWYLAVLGTLPSPRQSVSVFDAFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ +  + I +++     +R    +TGK + +   +  L+ GLP L  +
Sbjct: 181 PKPVGEAGLDAFLIAVAVAIAIAMMLPAYARRRLFQTGKPMKVWPFALSLLIGLPLLATL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ P L  FNF GGS V+PEF++L +ALS YTAAFIAEIVR+G+ +V +GQME
Sbjct: 241 IFGKPFSFEIPALKGFNFAGGSRVAPEFVALTLALSTYTAAFIAEIVRAGIQSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RLV++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGSTLRLVVVPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +QTGQAIEII I M +YL +SI+ +  M+
Sbjct: 361 SQTGQAIEIIAITMSVYLLISIVTSALMS 389


>gi|254463663|ref|ZP_05077074.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
 gi|206684571|gb|EDZ45053.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
          Length = 389

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 149/370 (40%), Positives = 229/370 (61%), Gaps = 4/370 (1%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87
            V +++  +L V+F    +N   N+    +  G  FL   AG  I   ++ Y+   SY  
Sbjct: 24  GVLVVVIAILYVLF----SNTQENLAIRGIESGFAFLGHEAGLPIGDSLIDYSPTRSYGY 79

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A LVG +NT +++   ++ +T++G ++G  R+S N L+A    +YVE  RN+P L+ +FF
Sbjct: 80  AFLVGILNTLFVSVLAIVFSTLLGIVIGVARVSRNWLLARGAAIYVETLRNLPLLLTLFF 139

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y  VL+ LP P  +I L  G+FL+ RG   P    +    +F+ +  + +VL++   R 
Sbjct: 140 IYTVVLAALPHPRDAIALSDGVFLSKRGFYLPRPVAEDGIGLFLGASAVALVLAVMFWRW 199

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++ +  +TG+++  L  +  +   L  L  +A    L  + PV   FNF GG ++ PEF 
Sbjct: 200 AKSYKVRTGRSVSGLRGALAIFLALSGLAFLASGQPLTSELPVYQGFNFKGGLSIKPEFA 259

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           SL I L  YTAA++AE VRSG+ +V  GQ+EAA ALG++    TR+VLLPQA+R  IP  
Sbjct: 260 SLLIGLVLYTAAYVAENVRSGIQSVHAGQIEAANALGVSSGVVTRMVLLPQALRVTIPAT 319

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T+ Y +L+KNSSLAVA+G+ D+VSVGGTII Q GQAIEII +WM +YL+++++I+L MN 
Sbjct: 320 TNDYASLVKNSSLAVAIGYPDMVSVGGTIIGQNGQAIEIIAMWMAVYLTINLIISLGMNM 379

Query: 388 LNAKIALKEK 397
           LNA++ L E+
Sbjct: 380 LNARVQLVER 389


>gi|119383546|ref|YP_914602.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373313|gb|ABL68906.1| L-asparagine ABC transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-glutamate ABC
           transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 417

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 162/408 (39%), Positives = 240/408 (58%), Gaps = 35/408 (8%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R  ++++Q I+ +L+ +   W ++N   N+     +L   FL  RAG++I Q ++
Sbjct: 17  LIYDRRYRSLTLQAIVFILVMLAASWLIDNTLRNLSAMGKTLSFDFLFRRAGYDIPQQLI 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PY SD ++  A ++G +NT  ++  G I ATI+G +VG  RLS+N L+A +  VYVEVFR
Sbjct: 77  PYNSDDTHLRATVIGLLNTLLVSILGCIAATILGVIVGVLRLSSNWLIARLMTVYVEVFR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH-------SIVLPFGMFL-NNRGLSFPTLTMDTNAKI 189
           NIP L+ I         V+P P+        + ++ F M    NR  + P++ M TN   
Sbjct: 137 NIPLLLWILVCLAIFTEVMPPPNAYRGENPAANMILFDMIAPTNRYTAIPSIGM-TNPPG 195

Query: 190 FVFSFVLGI-------------------VLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +     GI                   VL  +A R+     ++TGK  P  +  +  +F
Sbjct: 196 TISLGREGISWAFIAFAVVIAAAWTGWRVLRNWAQRV----QDRTGKR-PRTWWISLAMF 250

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P L L    + LH   PVL  FNF  G  +   F+ L++AL+ YT AFIAEIVR+G++
Sbjct: 251 VVPVLFL-TWYFGLHLVPPVLRGFNFADGINLDNAFVVLWLALTLYTGAFIAEIVRAGIL 309

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV RGQ EAA ALGL  R+   LV+LPQA+R I+PPL SQYLNL KNSSLA+AVG+ DL 
Sbjct: 310 AVSRGQTEAAFALGLRPRRTMSLVVLPQALRVIVPPLISQYLNLTKNSSLAIAVGYMDLR 369

Query: 351 -SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++GGT +NQTG+ +E +++ M IYL+LS++I+  MN  N+++ LKE+
Sbjct: 370 GTLGGTTLNQTGREMEAMVLMMGIYLALSLIISAGMNIFNSRVKLKER 417


>gi|260596109|ref|YP_003208680.1| putative amino-acid ABC transporter permease yhdX [Cronobacter
           turicensis z3032]
 gi|260215286|emb|CBA27217.1| Putative amino-acid ABC transporter permease protein yhdX
           [Cronobacter turicensis z3032]
          Length = 393

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 159/369 (43%), Positives = 223/369 (60%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+   ++  I  + ++N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QIVAIAVVLGIAAYLIHNTITNLNSRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  VY+E FRNIPPL+ IFF Y
Sbjct: 85  LVGLMNTLLVSALCIVFASFLGFFIGLARLSDNWLLRKLSTVYIETFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+      A  FV + V+ + LS    R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYLPSPEAGEGALAFVAALVIALTLSAGLYRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+          LI  LP L  +A    L +D P L  FNF GG  + PE  +L
Sbjct: 205 KHQMKTGQLRRTWPTLLLLIIVLPLLAHLAFGPALRWDVPALRGFNFRGGLALIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+++VP GQ EAA +LGL +    R V++PQAMR IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGILSVPYGQHEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNLY 384

Query: 389 NAKIALKEK 397
           N +IAL E+
Sbjct: 385 NRRIALVER 393


>gi|261342746|ref|ZP_05970604.1| general amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315399|gb|EFC54337.1| general amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 393

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 153/356 (42%), Positives = 216/356 (60%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+    ++ G  FL   AGF I Q ++ Y    +Y    +VG +NT  ++  
Sbjct: 38  YLIHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVFVVGLLNTLLVSAL 97

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  +G  RLS N L+  +   Y+E FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 98  CIVFASLLGFFIGLARLSDNWLLRKLSTFYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 157

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     +FL+NRGL  P+         FV +  L +V+S    R +R    KTG+     
Sbjct: 158 VDAFDLLFLSNRGLYIPSPQFAEGIYAFVIAIALALVISGGLFRYNRKHQVKTGQLRKTW 217

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +  LI  LP          LH+D P L  FNF GG  + PE  +L +ALS YT+AFIA
Sbjct: 218 PFALALIVVLPWAARGLFGAALHWDVPHLRGFNFQGGMVLIPELAALTLALSIYTSAFIA 277

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTSQYLN++KNSSLA 
Sbjct: 278 EIIRAGIQAVPYGQHEAARSLGLPNTVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAA 337

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L MN  N +IAL E+
Sbjct: 338 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLIISLLMNLYNRRIALVER 393


>gi|271498819|ref|YP_003331844.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270342374|gb|ACZ75139.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 392

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 158/374 (42%), Positives = 234/374 (62%), Gaps = 11/374 (2%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  +++ V   + ++N   N+ +  ++ G  FL+  AGF I Q ++ Y  D +YA   
Sbjct: 24  QILAVIIVVVAAAYLLHNTVTNLSQRGITSGFAFLNNNAGFGIVQHLIDYDQDDTYARVF 83

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++G +NT  ++   +I A+++G +VG  RLS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 84  VIGLLNTLLVSAICIICASLLGFIVGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 143

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P       A   + + ++ +  ++   R ++
Sbjct: 144 FAVLRNLPGPRQAVNAFDTFFLSNRGLYIPAAEFGPGALPSLLALLISLGCAIALHRRNK 203

Query: 210 HFHEKTGKA-----LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            +HE TG+      +P+  ++  L  GL  LV       LH+D PVL  FNF GG  + P
Sbjct: 204 RYHELTGQQRRYWPIPIAMLAVLL--GLSHLVF---GRALHWDFPVLKGFNFSGGMVLIP 258

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA++LGL      R V+LPQA+R II
Sbjct: 259 ELAALALALSVYTSSFIAEIIRSGIQSVSHGQHEAALSLGLPKPVTLRKVILPQALRVII 318

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           PPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L
Sbjct: 319 PPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISL 378

Query: 384 FMNRLNAKIALKEK 397
            MN  N KIAL E+
Sbjct: 379 LMNIYNRKIALIER 392


>gi|294675893|ref|YP_003576508.1| glutamate/aspartate ABC transporter permease BztB [Rhodobacter
           capsulatus SB 1003]
 gi|3182935|sp|Q52664|BZTB_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine transport
           system permease protein BztB
 gi|1655713|gb|AAB17887.1| BztB [Rhodobacter capsulatus SB 1003]
 gi|294474713|gb|ADE84101.1| glutamate/aspartate ABC transporter, permease protein BztB
           [Rhodobacter capsulatus SB 1003]
          Length = 426

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/412 (37%), Positives = 229/412 (55%), Gaps = 34/412 (8%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R  +I++QI++ LL     +W +NN Y N+E         FL  RAG+++ Q ++
Sbjct: 17  LIYDTRFRSITIQIVVLLLFLAGLVWLLNNAYVNLEAKGKDFNFSFLWTRAGYDLAQTLI 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PY++D ++  A++ G +NT  ++  G I ATI+GT++G  RLS N LVA I  VYVE FR
Sbjct: 77  PYSNDDTHFRALIEGLLNTLLVSVLGCILATILGTIIGVLRLSQNWLVARIMTVYVETFR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH----------------SIVLPFGMFLNNRGLSFPTL 181
           NIP L+ I  +   +    P+P                  S+     + + NRG + P  
Sbjct: 137 NIPLLLWILLMGTILAETRPVPKDFRLTEAMKAAGEEPKASMWFFDSVAVTNRGTNLPAP 196

Query: 182 TMDTNAKIFVFSFVLGIVLSLFA---------------TRLSRHFHEKTGKALPLLYIST 226
             D +  +    + L + L+  A                  ++   E TG      + S 
Sbjct: 197 AFDHSLGVVDLGWNLPVSLNALAILAVMSASFWGWRRFMARAKAVQEATGTRPTTWWPSL 256

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++F   + +L  L +  H D P + +F+F GG  +   F +L IAL+ YTAAFIAEIVR
Sbjct: 257 LILFAPISALLYGLGF--HLDYPQITKFDFTGGFQMLHSFTALLIALTLYTAAFIAEIVR 314

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+ RGQ EAA ALGL   +   LV+LPQA+R I+PPL SQ+LNL KNSSLA+AV +
Sbjct: 315 AGIQAISRGQTEAAYALGLRPGRTMSLVILPQALRVIVPPLISQFLNLTKNSSLAIAVSY 374

Query: 347 ADLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL  ++GG  +NQTG+ +E +L+ M IYL++S+ I+  MN  N  I LKE+
Sbjct: 375 MDLRGTLGGITLNQTGRELECMLLMMLIYLTISLTISSLMNLYNKSIKLKER 426


>gi|300718663|ref|YP_003743466.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064499|emb|CAX61619.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 392

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/395 (40%), Positives = 232/395 (58%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV R FS      +  V     QII  +++  +  + V+N   N+    ++ G GF
Sbjct: 2   SQRPTVKRDFS----FSNPAVRAWLYQIIAIVVVLGVAGYLVHNTVINLASRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ Y+   +YA   LVG  NT  ++   ++ A+++G  +G  RLS N 
Sbjct: 58  LERSAGFGIVQHLIDYSEGDTYARVFLVGLTNTLLVSALCIVFASLLGFFIGLSRLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  I  +Y+E FRNIPPL+ IFF Y +VL  LP P  +       F++NRGL  P    
Sbjct: 118 LLRKISTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQAASAFDLAFVSNRGLYIPWPQY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 FV + ++ +  ++   R +R +  KTG+       S  ++   P +  +     
Sbjct: 178 AVGTWPFVIALLVAVAGTVALFRYNRTYQLKTGQLRRTWPASVAMVIIFPVIAHLTFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDIPQLRGFNFRGGFALIPELAALTLALSIYTSTFIAEVIRSGIQSVPYGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           G+ +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GIPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S++I+L MN  N KI L E+
Sbjct: 358 AIETIAITMGVYLVISLLISLLMNIYNRKIRLIER 392


>gi|156935789|ref|YP_001439705.1| hypothetical protein ESA_03660 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534043|gb|ABU78869.1| hypothetical protein ESA_03660 [Cronobacter sakazakii ATCC BAA-894]
          Length = 393

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 159/379 (41%), Positives = 226/379 (59%), Gaps = 21/379 (5%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+   ++  I  + ++N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QIVAIAVVLGIAAYLIHNTITNLNNRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 85  LVGLMNTLLVSTLCIVFASFLGFFIGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+      A  FV + V+ + LS    R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYLPSPEAGEGALAFVAALVIALALSAGLYRFNK 204

Query: 210 HFHEKTGK----------ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
               KTG+           + +L +   LIFG P L          +D PVL  FNF GG
Sbjct: 205 KHQMKTGQLRRTWPSLLLLIVVLPLLAHLIFG-PAL---------RWDVPVLRGFNFRGG 254

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             + PE  +L +ALS YT+AFIAEI+R+G+++VP GQ EAA +LGL +    R V++PQA
Sbjct: 255 LALIPELAALTLALSVYTSAFIAEIIRAGILSVPHGQHEAARSLGLPNPVTLRQVIIPQA 314

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S
Sbjct: 315 MRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIIS 374

Query: 379 IMIALFMNRLNAKIALKEK 397
           + I+L MN  N +IAL E+
Sbjct: 375 LSISLLMNLYNQRIALVER 393


>gi|50119204|ref|YP_048371.1| L-amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609730|emb|CAG73164.1| L-amino acid ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 392

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/369 (41%), Positives = 228/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI++ + +  +  + ++N   N+ +  ++ G  FL++ AGF I Q ++ Y    +YA   
Sbjct: 24  QIVVVIAVLSVAAYLLHNTVTNLSQRGITSGFDFLNKSAGFGIVQHLIDYQQGDTYARVF 83

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG  NT  ++   ++ A+I+G  +G  RLS N L+  I  +Y+E+FRNIPPL+ IFF Y
Sbjct: 84  LVGLFNTLLVSALCIVFASILGFTIGLARLSDNWLLRKISNIYIEIFRNIPPLLQIFFWY 143

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  SI      FL+NRG   P+  M      F  S ++ +V++    R ++
Sbjct: 144 FAVLRNLPGPRQSISAFDIAFLSNRGFYLPSPEMGPGTAAFFLSLLITLVVTWSVFRRNQ 203

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +H  TG+      ++  L+  L  L  +      H++ P L  FNF GG  + PE  +L
Sbjct: 204 RYHALTGQVRRTWPLTLGLLLILCALSHLVFGPAFHWNVPELKGFNFRGGMVLIPELAAL 263

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT++FIAEI+RSG+ +V  GQ EAA +LGL +    R V+LPQA+R IIPPLTS
Sbjct: 264 TVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLGLPNPVTLRKVILPQALRVIIPPLTS 323

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L MN  
Sbjct: 324 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNLY 383

Query: 389 NAKIALKEK 397
           N +IAL E+
Sbjct: 384 NRRIALVER 392


>gi|294084020|ref|YP_003550777.1| glutamate/glutamine/aspartate/asparagine transport system permease
           [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663592|gb|ADE38693.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 395

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/394 (36%), Positives = 237/394 (60%), Gaps = 2/394 (0%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
            +  T  FS  +  Y+  V ++++QII   ++  +      NV  N+      L + FL 
Sbjct: 2   HQNSTTDFSLRRLFYNQEVRSVAIQIITLAVICYLVFSIGQNVLVNLAAIGKDLSMNFLW 61

Query: 66  ERAGFEID-QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
             AG++I  Q  V Y    ++  A LVG  NT  +A +G+I ATI+G  +G  RLS N L
Sbjct: 62  VPAGYDITFQPFVDYGPTDTHFRAALVGLSNTLLVAVTGIILATILGFTLGVMRLSNNFL 121

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ + +++++  RN+P L+ IFF+Y  ++++LP+P  +  +    ++ NRG+  P  T++
Sbjct: 122 VSKLSQIFIDFTRNVPVLLHIFFIYGVIINLLPVPKKAEAISGVFYMTNRGIFAPAPTLE 181

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +  V +F++ +       + +++   KTGK  PL +    LI  LP L  + +   +
Sbjct: 182 QGYEFVVGAFLIAVAGCFVLAKWAKNRQMKTGKIFPLFWTCLALIIALPVLTNMMIGGAI 241

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P L  FNF GG  + PE+++L+ ALS YTA+FIAEIVR G++A+ +GQ EAA ALG
Sbjct: 242 GVEVPKLKGFNFKGGLILRPEYVALWFALSYYTASFIAEIVRGGILAIHKGQKEAAHALG 301

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQA 363
           ++  +  RLV++PQA+  IIPP+ S YLNL KNSSLA+A+G+ D+V ++GG  + QTG+ 
Sbjct: 302 ISPTRTLRLVIIPQALPLIIPPIASNYLNLTKNSSLAIAIGYFDIVATLGGISLMQTGKE 361

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E + + +  YL LS++I+  MN LN ++ALK +
Sbjct: 362 VETMSLVLLTYLCLSLIISGAMNYLNHRVALKAR 395


>gi|56695434|ref|YP_165782.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Ruegeria pomeroyi DSS-3]
 gi|56677171|gb|AAV93837.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Ruegeria pomeroyi DSS-3]
          Length = 422

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/409 (37%), Positives = 236/409 (57%), Gaps = 32/409 (7%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            LYD R  + ++Q+I  +   ++  W ++N   N+      +  GF SE A ++I+Q ++
Sbjct: 17  LLYDTRYRSATIQVIAMIGFMLLAAWLISNTAQNLAALGKPIDFGFFSEPASYDINQRLL 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y+S  ++  A  +G +NT  +A  G I AT++G ++G  RLS N +VA +  +YVE FR
Sbjct: 77  DYSSRDTHLRAAFIGLLNTLVVAVLGCITATVLGVIIGVLRLSNNWIVARLMTIYVEGFR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIP--------DHSIVLPFGMFLNNRGLSFP---------- 179
           N+P L+ I F+   ++  LP P          S++L   + + NRG+  P          
Sbjct: 137 NVPVLLWIVFIMAILIETLPAPRAFRGDDATASMMLNDSVAVTNRGVYIPDALFSNSLGN 196

Query: 180 -------TLTMDTNAKIFVFSFVLG--IVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                  +L  D +  + +   VLG  + +S F  + +    E+TG   P+ +     + 
Sbjct: 197 VHLFGESSLRFDISLDLMLILIVLGGSLWVSNFLRKRADRIQEQTGDR-PVTWWQRLAVV 255

Query: 231 GLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            LPT LVL+ L +  H   P L  FNF GG+ +    ++L++ALS YTAAFIAEIVR+G+
Sbjct: 256 VLPTGLVLVLLGF--HLGYPELKGFNFQGGTHLRNSLIALWLALSLYTAAFIAEIVRAGI 313

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+ +GQ EAA ALGL   K   LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ D+
Sbjct: 314 LAISKGQTEAASALGLRSNKIMSLVILPQALRVIIPPLISNYLNLTKNSSLAIAVGYMDI 373

Query: 350 V-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             ++GG  +NQTG+ +E IL+ M +YL++S+ I+  MN  N  + LKE+
Sbjct: 374 TGTLGGITMNQTGRELETILLLMLVYLTISLSISAVMNWYNESVKLKER 422


>gi|311277769|ref|YP_003940000.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308746964|gb|ADO46716.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 393

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/369 (42%), Positives = 227/369 (61%), Gaps = 1/369 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I ++ ++N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QIVAVVAIASIVIYLIHNTITNLNNRGITSGFAFLDRSAGFGIVQHLIDYQEGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+IIG  +G  RLS N L+  +  +Y+EVFRNIPPL+ IFF Y
Sbjct: 85  VVGLLNTLLVSALCIVFASIIGFFLGLARLSENWLLRKLSTLYIEVFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++     ++L+NRGL  P   +      F  + +L IV+S+   R ++
Sbjct: 145 FAVLRNLPGPRQAVDAFDLVYLSNRGLYIPAPQLGEGLLAFTGAVLLAIVISIGLYRYNQ 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KTG+       +  L+  LP L        +H+D P L  FNF+GG  + PE  +L
Sbjct: 205 THQIKTGQLRRTWPTALGLLIFLPLLAHWTFGAAIHWDIPQLRGFNFLGGMALIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 324

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  
Sbjct: 325 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLSISLLMNIY 384

Query: 389 NAKIALKEK 397
           N ++AL E+
Sbjct: 385 NRRMALIER 393


>gi|332163169|ref|YP_004299746.1| putative ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667399|gb|ADZ44043.1| putative ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 392

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 162/373 (43%), Positives = 221/373 (59%), Gaps = 9/373 (2%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  L+L     +  +N   N+    ++ G  FL+  AGF I Q ++ Y    +Y    
Sbjct: 24  QIIALLILLGCGAYLFHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYEQGDTYGRVF 83

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG  NT  ++   +  A+I+G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 84  LVGLFNTLLVSVLCIFFASILGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 143

Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSF--VLGIVLSLFATR 206
            +VL  LP P  S    FG+ FL+NRGL  P+      A  FV +   VL  V+++ A  
Sbjct: 144 FAVLRNLPGPRQSQD-AFGVAFLSNRGLYLPSPEF---AAGFVPALIAVLLAVIAIIALH 199

Query: 207 LSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              HF +  TG+      I   L+  LP L        LH+D P L  FNF GG  + PE
Sbjct: 200 RYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPALHWDLPQLRGFNFKGGLVLIPE 259

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L +    R V+LPQA+R IIP
Sbjct: 260 LAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSLALPNTVTLRQVILPQALRVIIP 319

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+  
Sbjct: 320 PLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFL 379

Query: 385 MNRLNAKIALKEK 397
           MN  N +IAL E+
Sbjct: 380 MNLYNRRIALVER 392


>gi|238752137|ref|ZP_04613619.1| L-amino acid ABC transporter permease protein [Yersinia rohdei ATCC
           43380]
 gi|238709610|gb|EEQ01846.1| L-amino acid ABC transporter permease protein [Yersinia rohdei ATCC
           43380]
          Length = 392

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 167/397 (42%), Positives = 232/397 (58%), Gaps = 9/397 (2%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     + ++N   N+    ++ G  F
Sbjct: 2   SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLLHNTLTNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    SY    LVG  NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LNNSAGFGIIQHLIDYQQGDSYGRVFLVGLFNTLLVSALCIFFASILGFFLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLT 182
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S+   FG+ FL+NRGL  P+  
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLE-AFGVAFLSNRGLYLPSPE 176

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALK 241
               A   + + +L I L +   R + HF +  TG+      I   L+  LP    +   
Sbjct: 177 FAAGAIPALVAVLLAIALIIAIHRYN-HFRQLHTGQFHRTWPIGVLLLIALPAGAQLISG 235

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             LH++ P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA 
Sbjct: 236 PALHWNLPELQGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAAR 295

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360
           +L L +R   R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQT
Sbjct: 296 SLALPNRVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQT 355

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 356 GQAIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392


>gi|123444012|ref|YP_001007982.1| putative ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090973|emb|CAL13856.1| Putative ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 392

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 168/399 (42%), Positives = 230/399 (57%), Gaps = 13/399 (3%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     +  +N   N+    ++ G  F
Sbjct: 2   SQRPTVKGAFS----LTNPAVRAWLYQIIALLILLGCGAYLFHNTITNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y    LVG  NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLFNTLLVSVLCIFFASILGFFLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLT 182
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S+   FG+ FL+NRGL  P+  
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLD-AFGVAFLSNRGLYLPSPE 176

Query: 183 MDTNAKIFVFSF--VLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIA 239
               A  FV +   VL  V+++ A     HF +  TG+      I   L+  LP L    
Sbjct: 177 F---AAGFVPALIAVLLAVIAIIALYRYNHFRQLHTGQFRRTWPIGLVLLIALPALAHWL 233

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EA
Sbjct: 234 YGPALHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEA 293

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIIN 358
           A +L L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++N
Sbjct: 294 ARSLALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLN 353

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QTGQAIE I I M +YL +S+ I+  MN  N +I L E+
Sbjct: 354 QTGQAIETIAITMSVYLVISLSISFLMNLYNRRITLVER 392


>gi|318603945|emb|CBY25443.1| glutamate aspartate transport system permease protein GltJ
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 392

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 162/373 (43%), Positives = 221/373 (59%), Gaps = 9/373 (2%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  L+L     +  +N   N+    ++ G  FL+  AGF I Q ++ Y    +Y    
Sbjct: 24  QIIALLILLGCGAYLFHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYEQGDTYGRVF 83

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG  NT  ++   +  A+I+G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 84  LVGLFNTLLVSVLCIFFASILGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 143

Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSF--VLGIVLSLFATR 206
            +VL  LP P  S    FG+ FL+NRGL  P+      A  FV +   VL  V+++ A  
Sbjct: 144 FAVLRNLPGPRQSQD-AFGVAFLSNRGLYLPSPEF---AAGFVPALIAVLLAVIAIIALH 199

Query: 207 LSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              HF +  TG+      I   L+  LP L        LH+D P L  FNF GG  + PE
Sbjct: 200 RYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPALHWDLPQLRGFNFKGGLVLIPE 259

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L +    R V+LPQA+R IIP
Sbjct: 260 LAALTLALSVYTSTFIAEVIRSGIQSVPYGQDEAARSLALPNTVTLRQVILPQALRVIIP 319

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+  
Sbjct: 320 PLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFL 379

Query: 385 MNRLNAKIALKEK 397
           MN  N +IAL E+
Sbjct: 380 MNLYNRRIALVER 392


>gi|331007194|ref|ZP_08330405.1| Amino acid ABC transporter, permease protein [gamma proteobacterium
           IMCC1989]
 gi|330418989|gb|EGG93444.1| Amino acid ABC transporter, permease protein [gamma proteobacterium
           IMCC1989]
          Length = 348

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 140/348 (40%), Positives = 216/348 (62%), Gaps = 1/348 (0%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111
           ME   +  G GFL+E AGF+I   +VPY +  +Y    +VG +NT  ++  G+  +TI+G
Sbjct: 1   MEALGIKSGYGFLTETAGFDILMSLVPYDATYTYGRTFVVGLLNTILVSIVGIFFSTILG 60

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            ++G    S N L+  +  VYV+ FRNIP L+ +FF Y +VL+ LP    SI +    FL
Sbjct: 61  FIIGIAYFSKNWLLHKMSIVYVQTFRNIPLLLQVFFWYFAVLAALPGARDSINIGEAFFL 120

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N RGL FP +  ++ +     +  + ++ ++   + ++   ++TG+  P+   +  LI G
Sbjct: 121 NVRGLYFPAIVGESGSGFVHAALAIAVIAAIIIKKWAKKRQDETGQQFPVFITAIGLIVG 180

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +  + L      D P L  FNF GG TV PE M+L +ALS Y AAFIAE VR+G+ +
Sbjct: 181 LPLITNLILGTPFILDYPSLQGFNFAGGVTVIPELMALTLALSVYGAAFIAEAVRAGIQS 240

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ EAA ++ L  ++   L+++PQAMR IIP L S+Y +L+KNS+LA A+G+ DL +
Sbjct: 241 VPHGQTEAARSIALPEKRIMSLIIVPQAMRVIIPLLNSEYQSLIKNSTLATAIGYPDLFT 300

Query: 352 V-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V  GT +NQTGQAIEI+ + M  Y ++++++++ MN +N  +AL E+K
Sbjct: 301 VFVGTTLNQTGQAIEIVFMTMAAYFAINMLVSVIMNFMNGGVALTERK 348


>gi|115524736|ref|YP_781647.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris BisA53]
 gi|115518683|gb|ABJ06667.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris BisA53]
          Length = 401

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 160/391 (40%), Positives = 230/391 (58%), Gaps = 7/391 (1%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWC----VNNVYNNMEKSN 56
           M   AR   +++ +R++     R       + L LL     LW      +NV  N+    
Sbjct: 1   MAIEARPPPSQWVARLRRAVGGRSGWKG--LALQLLFVAALLWVGYEIADNVRGNLANQR 58

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           ++ G GF+S+ AGF + Q ++PY+   SY    LVG VNT  ++  G+  ATI+G +V  
Sbjct: 59  IASGFGFMSQTAGFGVSQALIPYSESDSYTRVFLVGLVNTLVVSAIGIFFATILGFIVAL 118

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            RLS N L+A I   YVE+ RN+P L  I F Y +VL  LP P  S+ L    FL+NRG+
Sbjct: 119 CRLSPNWLLARIGGGYVELVRNLPLLFQILFWYLAVLGTLPSPRQSVSLFDAFFLSNRGI 178

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
             P    +     F+ +  + I  ++     +R    +TGK L +      L+ GLP L 
Sbjct: 179 VVPKPVGEAGLDAFLIAVAIAIAAAIALPAFARRRLYQTGKPLKVWPAVLGLLIGLPLLA 238

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            +       F+ P L  FNF+GG  + PEF++L +ALS YTAAFIAEIVR+G+ +V +GQ
Sbjct: 239 SLIAGQPFSFEIPALKGFNFVGGGRMPPEFVALTLALSTYTAAFIAEIVRAGIQSVHKGQ 298

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGT 355
           MEA  +LGL+     RL+++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT
Sbjct: 299 MEAGASLGLSRGATLRLIVIPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGT 358

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            ++QTGQAIEII + M +YL++S++ +  M+
Sbjct: 359 TLSQTGQAIEIIAVTMSVYLAISLVTSALMS 389


>gi|192291211|ref|YP_001991816.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
 gi|192284960|gb|ACF01341.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
          Length = 401

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 149/359 (41%), Positives = 216/359 (60%), Gaps = 21/359 (5%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V+N  +N+    ++ G  F+S  AGF + Q ++PY    SY    LVG +NT  ++  G+
Sbjct: 47  VDNARDNLANQRIASGFAFMSHTAGFGVSQTLIPYQESDSYTRVFLVGLINTLVVSVVGI 106

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
             AT+IG  V   RLS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  SI 
Sbjct: 107 FFATVIGFAVALARLSPNWLISRIGGGYVEIVRNLPLLFQILFWYLAVLGSLPSPRQSIS 166

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL--- 221
           +    FL+NRG+  P L  +     F+ + ++ +  ++     +R     TGK + +   
Sbjct: 167 VMDSFFLSNRGIVVPRLAGEAGLDGFLVALLIAVAAAIVLPLYARRRLFATGKPMRVWPW 226

Query: 222 -------LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
                  L +  FLI G P             + PVL  FNF+GGS ++PEF++L +ALS
Sbjct: 227 VLGLLIGLPLIAFLIVGKP----------FSLEVPVLRGFNFVGGSRIAPEFVALTLALS 276

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            YTAAFIAE+VR+G+++V +GQMEA  +LGL+  +  RL+++PQAMR I+PPLT+QYLNL
Sbjct: 277 TYTAAFIAEVVRAGILSVHKGQMEAGASLGLSRGQTLRLIVIPQAMRVILPPLTNQYLNL 336

Query: 335 LKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            KNSSLAVA+G+ DL SV  GT ++QTGQAIE+I I M +YL +S++ +  M+    +I
Sbjct: 337 TKNSSLAVAIGYPDLFSVFAGTTLSQTGQAIEVIAITMGVYLLISLVTSALMSLYGWRI 395


>gi|330862828|emb|CBX72969.1| putative amino-acid ABC transporter permease protein yhdX [Yersinia
           enterocolitica W22703]
          Length = 400

 Score =  252 bits (643), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 161/373 (43%), Positives = 220/373 (58%), Gaps = 9/373 (2%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  L+L     +  +N   N+    ++ G  FL+  AGF I Q ++ Y    +Y    
Sbjct: 32  QIIALLILLGCGAYLFHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYEQGDTYGRVF 91

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG  NT  ++   +  A+I+G  +G   LS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 92  LVGLFNTLLVSVLCIFFASILGFFLGLAHLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 151

Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSF--VLGIVLSLFATR 206
            +VL  LP P  S    FG+ FL+NRGL  P+      A  FV +   VL  V+++ A  
Sbjct: 152 FAVLRNLPGPRQSQD-AFGVAFLSNRGLYLPSPEF---AAGFVPALIAVLLAVIAIIALH 207

Query: 207 LSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              HF +  TG+      I   L+  LP L        LH+D P L  FNF GG  + PE
Sbjct: 208 RYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPALHWDLPQLRGFNFKGGLVLIPE 267

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L +    R V+LPQA+R IIP
Sbjct: 268 LAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSLALPNTVTLRQVILPQALRVIIP 327

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+  
Sbjct: 328 PLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFL 387

Query: 385 MNRLNAKIALKEK 397
           MN  N +IAL E+
Sbjct: 388 MNLYNRRIALVER 400


>gi|7465992|pir||G65119 hypothetical 40.4 kD protein in acrF-rrnD intergenic region -
           Escherichia coli (strain K-12)
 gi|606210|gb|AAA58073.1| ORF_o368a; frameshift at end might extend [Escherichia coli str.
           K-12 substr. MG1655]
          Length = 368

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/334 (42%), Positives = 204/334 (61%), Gaps = 1/334 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 151 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 210

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 211 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 270

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTS
Sbjct: 271 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTS 330

Query: 330 QYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           QYLN++KNSSLA A+G+ D+VS+  GT++NQTG+
Sbjct: 331 QYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGK 364


>gi|163745576|ref|ZP_02152936.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Oceanibulbus indolifex HEL-45]
 gi|161382394|gb|EDQ06803.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Oceanibulbus indolifex HEL-45]
          Length = 389

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 156/390 (40%), Positives = 228/390 (58%), Gaps = 12/390 (3%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
            L D R  +I+ Q+I AL+L V  +W + +N+  N+  + L++   FL   AG++I+Q +
Sbjct: 2   LLSDTRYRSITFQVI-ALVLLVTAIWYLGSNLAANLRAAGLNISFQFLGNPAGYDINQTL 60

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +PYTS SS   A  VG +NT  ++F   + AT+ G + G  RLS N LV  +   YVE+F
Sbjct: 61  IPYTSQSSNLQAAWVGIINTLLVSFLACLTATLFGVVAGVLRLSNNWLVRKLMAGYVEIF 120

Query: 137 RNIPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKI 189
           RNIP L+ I  +Y  + + +P P      D +  +  G F   NRG+  P       +  
Sbjct: 121 RNIPVLIWILIIYTIMTAAMPAPSAFRGDDPASSMMLGSFAFTNRGVYIPGPVWGAGSMF 180

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDK 248
            V +F+  I+      R +      TG+ LP+L+ S  ++  LPT+V+   +   +  D 
Sbjct: 181 VVATFIASIIGVFAYRRYATKLLYDTGRLLPMLWPSVAILL-LPTIVVFFIMGMPIGLDY 239

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ AV RGQ EAA ALGL   
Sbjct: 240 PALKGFNFQGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSRGQSEAAAALGLRPG 299

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEII 367
           +   LV+LPQA+R IIPPL S YLN+ KNSSLA+ VG+AD+  ++GG  +NQTG+AIE +
Sbjct: 300 RVMNLVVLPQALRVIIPPLISNYLNITKNSSLAILVGYADITATLGGITLNQTGRAIECV 359

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++ M  YL +S+ I++ MN  N    LKE+
Sbjct: 360 VLLMLFYLVISLGISMVMNVYNNATKLKER 389


>gi|89070521|ref|ZP_01157810.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Oceanicola granulosus HTCC2516]
 gi|89043828|gb|EAR50026.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Oceanicola granulosus HTCC2516]
          Length = 424

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/394 (38%), Positives = 232/394 (58%), Gaps = 12/394 (3%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F   + +YD R  ++++Q++  +LL +   W V+N   N+         GFL++ AG++I
Sbjct: 34  FRLSQLIYDSRYRSLTIQVVAMVLLVLALSWLVSNTIQNLAALGKDFNFGFLTQSAGYDI 93

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q ++PY +  S+  A LVG +NT  +AF G + ATIIGT+ G  RLS N +V  +  VY
Sbjct: 94  NQRLIPYDNQMSHGRAALVGILNTILVAFLGCVTATIIGTIAGVLRLSKNWIVGRLMTVY 153

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDH----SIVLPFG-MFLNNRGLSFPTLTMDTNA 187
           VE FRN+P L+ I  ++  V   +P P       + + FG + +  +G   P    +  +
Sbjct: 154 VEAFRNVPLLLWIILIFAIVNESMPHPRDFGSGDVPMVFGSIAITRQGTWIPAPVFENLS 213

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV---LIALKYQL 244
                 F   +V      R +R   E TG+  P+ ++S  L F LPT++   L+ +   L
Sbjct: 214 GALFIVFAASLVAIALYRRWARKRQEATGQISPVFWVSLGL-FVLPTVIAYFLLGMPVSL 272

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            + +P  G+F F GG  +    ++L++ALS YT AFIAEIVR G++A+ +GQ EAA ALG
Sbjct: 273 DYPEP--GRFRFDGGLLIRNSLIALWLALSLYTGAFIAEIVRGGILAISKGQSEAAYALG 330

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQA 363
           L   +   LV+LPQAMR I+PPL SQ+LNL KNSSLA+AVG+ D   ++GG  INQTG+ 
Sbjct: 331 LRPNRTMNLVILPQAMRVIVPPLISQFLNLTKNSSLAIAVGYMDARATLGGITINQTGRE 390

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E +L+    YL LS++I+  MN  N ++ LKE+
Sbjct: 391 LEGMLLLGLFYLVLSLVISAVMNVYNNRVKLKER 424


>gi|51245287|ref|YP_065171.1| amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50876324|emb|CAG36164.1| probable amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 390

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/356 (42%), Positives = 222/356 (62%), Gaps = 1/356 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
           +FL+D R  +   Q  + L+L     +   NV +N++K+ ++ G  FL E AGF+I Q +
Sbjct: 22  RFLHDARFRSYLAQATVLLVLIAALSYGGYNVVHNLQKAGVTTGFAFLDETAGFDISQTL 81

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y+S S+YA A++VG +NT  ++  G++ +T++G  +   RLS+N LV+ +   YVE+ 
Sbjct: 82  IAYSSKSTYADALVVGLLNTLLVSALGIVFSTVLGFSLAVLRLSSNWLVSKLATTYVEII 141

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIP L+ I F Y ++L+ LP    ++      +L NRGL  P   +D    +   +  L
Sbjct: 142 RNIPLLLQILFWYLAILAPLPSARKALSFEGIAYLCNRGLQLPRPVLDGGGNLVALALGL 201

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            +V+S F  R +     +TG+  P +  S  LI  LP + L  + + LH++ PVL  FNF
Sbjct: 202 ALVVSFFFIRWNHLRQRRTGRRFPAVLFSLVLIISLPLVALACMGFPLHWELPVLKGFNF 261

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG TV PE ++L +AL+ YTA FI+E VRSG+++V RGQ EAA ALG       RL++L
Sbjct: 262 RGGITVLPELIALLLALTLYTATFISEYVRSGIMSVDRGQKEAAEALGYQPWMIYRLIIL 321

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWM 371
           PQAMR  IPPL SQYL L+KNSSLAV +G+ DL+ V  GT++NQ+GQA+EII I M
Sbjct: 322 PQAMRVAIPPLISQYLTLVKNSSLAVVIGYPDLIHVFAGTVLNQSGQAMEIIAITM 377


>gi|159042875|ref|YP_001531669.1| glutamate/glutamine/aspartate/asparagine ABC transport system
           permease [Dinoroseobacter shibae DFL 12]
 gi|157910635|gb|ABV92068.1| glutamate/glutamine/aspartate/asparagine ABC transport system
           permease [Dinoroseobacter shibae DFL 12]
          Length = 411

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 159/387 (41%), Positives = 221/387 (57%), Gaps = 11/387 (2%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R    + Q I  + L   F W V+N   N+      +   FL + A +EIDQ ++PYT
Sbjct: 26  DTRYRGYTFQFIALIALIFFFGWLVSNAIYNLAALGQDINFSFLGQPASYEIDQTLIPYT 85

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S  ++  A  VG +NT  +AF G I ATI G L G  RLS N LVA +  VYVE+FRNIP
Sbjct: 86  STDTHMRAAFVGLLNTLLVAFLGCITATIFGVLAGVLRLSKNWLVAKVMSVYVEIFRNIP 145

Query: 141 PLVVIFFLYKSVLSVLPIP--------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
            L+ I  +   +   LP P          ++VL   +   NRG+  P    +  + I V 
Sbjct: 146 VLIWIVIISAVMSQALPQPRAFRGEDATATMVLWDSVAFTNRGVYIPAPVWNPGSGIVVA 205

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVL 251
            FVL I+      R +++    TGK LP+  IS   IF +PTL+    +   +  D P L
Sbjct: 206 VFVLSIIGIFVFRRYAKNLLFNTGKLLPVGRIS-LAIFFVPTLLAFFVMGRPIGLDYPEL 264

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G FNF GG  +    ++L+ AL+ YT AFIAE VR+G++AV +GQ EAA ALG+   +  
Sbjct: 265 GGFNFRGGINIRGTLIALWFALALYTGAFIAENVRAGILAVSKGQTEAAAALGMRPNRIM 324

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILIW 370
            L++LPQA+R IIPP+ SQYLNL KNSSLA A+G+ DL  ++GG  +NQTG++ E +L+ 
Sbjct: 325 SLIILPQALRVIIPPVISQYLNLTKNSSLAAAIGYMDLTGTLGGVTLNQTGRSFECVLLL 384

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M  YL +S+ I+  MN  N  + LKE+
Sbjct: 385 MLFYLLISLSISALMNLYNNAVKLKER 411


>gi|39935627|ref|NP_947903.1| polar amino acid ABC transport permease AapQ-1 [Rhodopseudomonas
           palustris CGA009]
 gi|39649480|emb|CAE28002.1| polar amino acid ABC transport permease protein aapQ-1
           [Rhodopseudomonas palustris CGA009]
          Length = 401

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 146/349 (41%), Positives = 217/349 (62%), Gaps = 1/349 (0%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           V+N  +N+    ++ G  F+S  AGF + Q ++PY    SY    LVG +NT  ++  G+
Sbjct: 47  VDNARDNLANQRIASGFAFMSHTAGFGVSQTLIPYQESDSYTRVFLVGLINTLVVSVVGI 106

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
             AT+IG  V   RLS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ 
Sbjct: 107 FFATVIGFAVALARLSPNWLISRIGGGYVEIVRNLPLLFQILFWYLAVLGSLPSPRQSVS 166

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +    FL+NRG+  P L  +     F+ + ++ +  ++     +R     TGK + +   
Sbjct: 167 VMDSFFLSNRGIVVPRLAGEAGLDGFLVALLIAVAAAIVLPLYARRRLFATGKPMRVWPW 226

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L+ GLP +  + +      + PVL  FNF+GGS ++PEF++L +ALS YTAAFIAE+
Sbjct: 227 VLGLLIGLPLIAFVIVGKPFSLEVPVLRGFNFVGGSRIAPEFVALTLALSTYTAAFIAEV 286

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+++V +GQMEA  +LGL+  +  RL+++PQAMR I+PPLT+QYLNL KNSSLAVA+
Sbjct: 287 VRAGILSVHKGQMEAGASLGLSRGQTLRLIVIPQAMRVILPPLTNQYLNLTKNSSLAVAI 346

Query: 345 GFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G+ DL SV  GT ++QTGQAIE+I I M +YL +S++ +  M+    +I
Sbjct: 347 GYPDLFSVFAGTTLSQTGQAIEVIAITMGVYLLISLVTSALMSLYGWRI 395


>gi|251791416|ref|YP_003006137.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540037|gb|ACT08658.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 392

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/388 (42%), Positives = 236/388 (60%), Gaps = 16/388 (4%)

Query: 21  DMRVHNISVQIILALLLTVIFL-----WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           D+ + N +V+  L  +L V+ +     + ++N   N+ +  ++ G  FL+  AGF I Q 
Sbjct: 10  DLSLTNPAVRAWLYQILAVVIVVTTVGYLLHNTVTNLAQRGITSGFAFLNNSAGFGIVQH 69

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y    +YA   +VG +NT  ++   +I A+++G +VG  RLS N L+  +  +Y+E 
Sbjct: 70  LIDYEQGDTYARVFVVGLLNTLLVSAICIICASLLGFIVGLSRLSDNWLLRKLSTIYIET 129

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA--KIFVFS 193
           FRNIPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P       A     V  
Sbjct: 130 FRNIPPLLQIFFWYFAVLRNLPGPRQAVNAFDTFFLSNRGLYIPAAEFGPGALPSFLVLL 189

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKA---LPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             LG  ++L   R ++ +HE TG+     P+  +   ++ GL  L+       LH D PV
Sbjct: 190 ISLGCAVALH--RRNKRYHELTGQQRRYWPIPLVMLIVLLGLSHLIF---GQALHGDFPV 244

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA++LGL     
Sbjct: 245 LKGFNFNGGLVLIPELAALALALSVYTSSFIAEIIRSGIQSVSHGQHEAALSLGLPKPVT 304

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILI 369
            R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I
Sbjct: 305 LRKVILPQALRVIIPPLTSQYLNVVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAI 364

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M +YL +S++I+L MN  N KIAL E+
Sbjct: 365 TMSVYLIISLLISLLMNIYNRKIALIER 392


>gi|254469135|ref|ZP_05082540.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Pseudovibrio sp. JE062]
 gi|211960970|gb|EEA96165.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Pseudovibrio sp. JE062]
          Length = 678

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/352 (41%), Positives = 205/352 (58%), Gaps = 4/352 (1%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109
            N+E        GFL E AG++I Q +V YTS S +  A LVG +NT  +AF   + ATI
Sbjct: 327 ENLEALGKDFNFGFLYEPAGYDIGQVLVNYTSASGHWKAALVGLLNTLLVAFLACVTATI 386

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF-- 167
           IG  VG  RLS N +V+ +  VY+E  RN+P L+ I   Y   + V P P  ++  P   
Sbjct: 387 IGVFVGVLRLSNNWVVSRLMAVYIEGVRNVPLLLQILAWYAVFIHVFPTPKQAVKAPVIE 446

Query: 168 -GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             ++  NRG   P LT D   +I V   +  I       R +R   E TG+ LP+ YIS 
Sbjct: 447 GAVYATNRGFYIPGLTFDGGYQIVVAVLLASIAGIFVFRRWARQRQEATGQILPVGYISL 506

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++     L   A    +  D PV G+FN  GG  V    ++L+ ALS Y+AAF+AEIVR
Sbjct: 507 AILIVPTVLAYFASGMPIGLDYPVAGRFNLKGGLKVGTPLIALWFALSIYSAAFVAEIVR 566

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++A+ +GQ EAA ALGL  R+   LV+LPQ++R IIPP+ S YLN+ KNSSLA+AVG+
Sbjct: 567 AGIMAISKGQTEAAYALGLRPRRTMSLVVLPQSLRIIIPPMISNYLNITKNSSLAIAVGY 626

Query: 347 ADLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL  ++GG  +NQTG+ +E +L+ M  YL +S+ I+  MN  N  + LK +
Sbjct: 627 MDLTGTLGGITLNQTGREMECMLLLMATYLLISLSISAVMNVYNESVKLKGR 678


>gi|260432481|ref|ZP_05786452.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416309|gb|EEX09568.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 410

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/393 (40%), Positives = 238/393 (60%), Gaps = 18/393 (4%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q+I A+++ +   +  NN+  N+  + L++   FL + AG++I+Q +V Y 
Sbjct: 20  DTRYRSLTFQVIAAIVIALSIWYLGNNLIQNLRAAGLNISFAFLGDPAGYDINQRLVEYD 79

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+  A +VG +NT  +A    I ATI G + G  RLS N LV+ I  +YVE+FRNIP
Sbjct: 80  SQSSHGRAAIVGILNTLLVAVLACITATIFGVIAGVLRLSKNWLVSKIMAIYVEIFRNIP 139

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTN---AKIF 190
            L+ I  ++  + +V+P P      + +  + F +F   NRG+  P          + I 
Sbjct: 140 VLIWIIIIFTIMTAVMPGPREFRGDNPTSSMLFDLFAFTNRGVYIPRPEFSNGLFGSAIL 199

Query: 191 VFSFVL-GIVLSLFAT----RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            +  VL G+V S FA+    + +    E+TG   P  ++    ++ +P L+L+ L   L 
Sbjct: 200 NWLLVLAGLVGSWFASHEIEKRATLKQEQTGDR-PKTFLPKLAVWLVPFLILMVL-MGLT 257

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +D P L  FNF GG  V    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALGL
Sbjct: 258 WDVPELKGFNFSGGIKVGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAAALGL 317

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAI 364
              +  +LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+  ++GG  +NQTG+AI
Sbjct: 318 RPGQIMKLVILPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAI 377

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E +L+ M  YL+ S++I+  MN  NA + LKE+
Sbjct: 378 ECVLLLMLFYLTASLLISAVMNVYNASVKLKER 410


>gi|254466381|ref|ZP_05079792.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacterales bacterium Y4I]
 gi|206687289|gb|EDZ47771.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacterales bacterium Y4I]
          Length = 395

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/393 (40%), Positives = 232/393 (59%), Gaps = 18/393 (4%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q+I A++L +   +  NN+  N+  + L++   FL + AG++I+Q +V Y 
Sbjct: 5   DTRYRSLTFQVIAAIVLALCIWYLGNNLIQNLRAAGLNISYAFLGDSAGYDINQRLVEYD 64

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+A A LVG +NT  +AF   I ATI G + G  RLS N LV+ +  VYVE+FRNIP
Sbjct: 65  SQSSHARAALVGVLNTLLVAFLACITATIFGVIAGVLRLSNNWLVSKLMAVYVEIFRNIP 124

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDT----NAKI 189
            L+ I  ++  + +VLP P      D +  + F  F   NRG+  P          +A +
Sbjct: 125 VLIWIIIIFTIMTAVLPGPREFRGDDATSSMLFDAFAFTNRGIYTPLPWFQNGIFESASM 184

Query: 190 FVFSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                + G+ LS  A       + +  E TG   P   +     + +P L L  +   L 
Sbjct: 185 NWLLVLAGLGLSWVAAHQINAWANNKQEATG-VRPKTLLPVLAAWLVPFLALTMI-MGLT 242

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           ++ P L  FNF GG  V    ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL
Sbjct: 243 WEYPELKGFNFTGGIKVGGPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAAAALGL 302

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAI 364
             R+   LV+LPQAMR IIPPL SQ+LN+ KNSSLA+AVG+AD+  ++GG  +NQTG+AI
Sbjct: 303 RPRRVMNLVVLPQAMRVIIPPLISQFLNITKNSSLAIAVGYADITATLGGITLNQTGRAI 362

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E +L+ M  YL+ S++I++ MN  NA + LKE+
Sbjct: 363 ECVLLLMLFYLTASLVISMVMNVYNASVKLKER 395


>gi|146313342|ref|YP_001178416.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145320218|gb|ABP62365.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Enterobacter sp. 638]
          Length = 393

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 155/356 (43%), Positives = 215/356 (60%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + V+N   N+    ++ G  FL   AGF I Q ++ Y    +Y    LVG +NT  ++  
Sbjct: 38  YLVHNTVTNLSNRGITSGFAFLDRTAGFGIVQHLIDYQESDTYGRVFLVGLLNTLLVSAL 97

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+ +G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 98  CIVFASFLGFFLGLARLSENWLLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 157

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      FL+NRGL  P+          + + V+ + +S+   R +R    KTG+     
Sbjct: 158 LDAFELFFLSNRGLYIPSPEAGEGLWAAIAAIVIAVAISVGLFRYNRMHQMKTGQLRKTW 217

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +   LI GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIA
Sbjct: 218 PVGLLLIVGLPLLAQGIFGSALHWDIPELRGFNFRGGMVLIPELAALTLALSIYTSAFIA 277

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+RSG+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTSQYLN+ KNSSLA 
Sbjct: 278 EIIRSGIQAVPHGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIAKNSSLAA 337

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  N +IAL E+
Sbjct: 338 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLTISLLMNIYNRRIALVER 393


>gi|304391888|ref|ZP_07373830.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein BztB [Ahrensia sp. R2A130]
 gi|303296117|gb|EFL90475.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein BztB [Ahrensia sp. R2A130]
          Length = 400

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 158/388 (40%), Positives = 225/388 (57%), Gaps = 4/388 (1%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F   +  YD R  +I++QII   +  ++  W V NV  N E    + G  FL + A ++I
Sbjct: 14  FRLSQLFYDQRYRSITLQIITIAVFMLMVSWLVTNVIQNFEDLGKTFGFDFLWQPASYDI 73

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q ++ Y+S S +  A +VG +NT  +AF G I ATIIG  VG  RLS N LVA +  V+
Sbjct: 74  NQKLIEYSSVSPHWKAAIVGILNTLVVAFLGCILATIIGVAVGVARLSKNWLVAKLMTVF 133

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL-NNRGLSFPTLTMDTNAKIFV 191
           +E  RN+P L+ I        S LP P  + V+  G F+  NRG   P    +  + I  
Sbjct: 134 IEAMRNVPVLLWILLASTVFSSALPSPRQAPVMLGGGFVPTNRGFYVPAPVFNDGSIILG 193

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPV 250
             F+  I+ +    R +     +TG  LP+  I T  I  LP  V+   L   +  + P 
Sbjct: 194 IIFIASIIGAFIFRRWAAARQARTGDILPVFRI-TMAILILPVFVMFFLLGMPIGLELPE 252

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  FNF GG  +   FM+L++ALS YTAAFIAE VR+G+ A+  GQ EAA +LGL   + 
Sbjct: 253 LQGFNFQGGLYIRSSFMALWLALSFYTAAFIAENVRAGIQAISNGQSEAAYSLGLPPSRT 312

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILI 369
             LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+  ++GG  +NQTG+ +E +L+
Sbjct: 313 MNLVILPQALRIIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQTGREMECLLL 372

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M  YL +S++I+  MN  N  ++L+E+
Sbjct: 373 VMGFYLIISLLISGAMNIYNNSVSLRER 400


>gi|84499807|ref|ZP_00998095.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Oceanicola batsensis HTCC2597]
 gi|84392951|gb|EAQ05162.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Oceanicola batsensis HTCC2597]
          Length = 389

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/385 (39%), Positives = 221/385 (57%), Gaps = 8/385 (2%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +I+ Q++  +LL     +   N+  N+      +   FL E +G++I+Q  +PY 
Sbjct: 5   DTRYRSITFQVVALILLAAAIGFLGWNLMRNLALLGQDISFEFLGEPSGYDINQRPIPYD 64

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+  A  VG +NT  +AF G I ATI+G + G  RLS N ++  +  VYVE FRN+P
Sbjct: 65  SQSSHLRATFVGVLNTLIVAFLGCITATILGVVAGVLRLSNNWIIRKLMMVYVEAFRNVP 124

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFVFS 193
            L+ I  ++  + + LP P      D    + FG F   NRG+  P    +  + I V  
Sbjct: 125 VLIWILIIFFVMTAALPPPSAFRGDDPDSSMLFGAFAFTNRGIYIPRPIWEPGSAIVVGV 184

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F+  ++      R +      TGK LP  + S  ++F    LV   L   +  D P L  
Sbjct: 185 FIASVIGVFAYRRYTTRLLYDTGKLLPRGWPSLLILFVPTLLVFFILGQPISLDLPALRG 244

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG+ +    ++L+ AL+ YT AFIAE VR+G+ AV  GQ EAA +LGL   +   L
Sbjct: 245 FNFQGGTQIRGSLIALWFALAIYTGAFIAENVRAGIQAVSHGQTEAAASLGLRPGRIMNL 304

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILIWMF 372
           V+LPQA+R +IPP+ SQYLNL KNSSLA+AVG+ DL  ++GG  +NQTG+AIE +L+ M 
Sbjct: 305 VVLPQALRIVIPPVISQYLNLTKNSSLAIAVGYMDLTGTLGGITLNQTGRAIESVLLLML 364

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
            YL++S+ I+  MN  NA++ LKE+
Sbjct: 365 FYLTISLSISAVMNVYNARMQLKER 389


>gi|259906954|ref|YP_002647310.1| amino-acid ABC transporter permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224962576|emb|CAX54031.1| amino-acid ABC transporter permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283476748|emb|CAY72584.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 392

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/357 (43%), Positives = 217/357 (60%), Gaps = 3/357 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N  NN+    ++ G  FL   AGF I Q ++ Y+   SYA   LVG  NT  ++  
Sbjct: 37  YLIHNTTNNLASRGITSGFSFLERNAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  VG  RLS N L+  +  VYVE FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CIVFASLLGFFVGLARLSDNWLLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P          F+ + +L   +S    R ++    KTG+ L   
Sbjct: 157 LHAFDLAFVSNRGLYIPWPEYSAGTVPFLLALLLATAISTALFRYNKQHQLKTGR-LRRT 215

Query: 223 YISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +T  +  L P   ++     +H+D P L  FNF GG  + PE  +L +ALS YT+ FI
Sbjct: 216 WPATVAMLALFPLAAILLAGSPMHWDIPQLRGFNFRGGFVLIPELAALTLALSIYTSTFI 275

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++RSG+ +VP GQ EAA +LGL H      V++PQA+R IIPPLTSQYLN++KNSSLA
Sbjct: 276 AEVIRSGIQSVPYGQHEAASSLGLPHTVTLHQVIIPQALRVIIPPLTSQYLNIVKNSSLA 335

Query: 342 VAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 336 AAIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|317122274|ref|YP_004102277.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315592254|gb|ADU51550.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 392

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/375 (39%), Positives = 215/375 (57%), Gaps = 11/375 (2%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D+R+  + +Q ++ + +    ++ + NV  N+++  ++ G  FL   A F I +  + Y 
Sbjct: 15  DVRLRRLLIQGVVLVAVAAAAVYLIGNVQRNLQQLGITPGFDFLRHPASFAIGETSIAYR 74

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +   Y  A L G VNT  ++  G++ AT++G   G  RLS N LV  +  +YVEV RN P
Sbjct: 75  ASDPYGRAFLAGLVNTLRVSVLGVVLATVVGVTAGLARLSGNGLVRLLASLYVEVTRNTP 134

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+ +FF Y +++  LP    +I LP  +FL NRGL  P            F   L IVL
Sbjct: 135 LLLQLFFWYGAIVYTLPPAAQAITLPGSVFLMNRGLVMPAPKPGPG-----FGPALAIVL 189

Query: 201 SLFATRLSRHFH------EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +     +  +        E+  +  P L  +  L  G+     +     L  D+PVL +F
Sbjct: 190 TAAVAAMVAYRRLLRRRVEEGRETRPGLVAAVLLAAGVLAAGFLPPGPPLVLDRPVLARF 249

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           NF GG  +S EF +L +AL  YT AFIAE+VR G++AVPRGQ EAA +LGL      RLV
Sbjct: 250 NFQGGLMLSAEFTALLLALVIYTGAFIAEVVRGGVLAVPRGQWEAAASLGLPPLLVQRLV 309

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQA+R IIPPLTSQYLNL+KNSSLA+AV F DL++V  TI+NQTG+ +E++L+    Y
Sbjct: 310 VFPQALRIIIPPLTSQYLNLIKNSSLAMAVAFPDLLNVSSTIVNQTGRTLEVLLMVGGTY 369

Query: 375 LSLSIMIALFMNRLN 389
           L+ S++ +L MN  N
Sbjct: 370 LAFSLLTSLLMNLYN 384


>gi|310766169|gb|ADP11119.1| amino-acid ABC transporter permease protein [Erwinia sp. Ejp617]
          Length = 392

 Score =  249 bits (635), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 154/357 (43%), Positives = 217/357 (60%), Gaps = 3/357 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N  NN+    ++ G  FL   AGF I Q ++ Y+   SYA   LVG  NT  ++  
Sbjct: 37  YLIHNTTNNLASRGITSGFSFLERNAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  VG  RLS N L+  +  VYVE FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CIVFASLLGFFVGLARLSDNWLLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P          F+ + +L   +S    R ++    KTG+ L   
Sbjct: 157 LHAFDLAFVSNRGLYIPWPEYSAGTVPFLLALLLATAISTALFRYNKQRQLKTGR-LRRT 215

Query: 223 YISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +T  +  L P   ++     +H+D P L  FNF GG  + PE  +L +ALS YT+ FI
Sbjct: 216 WPATVAMLALFPLAAILLAGSPMHWDIPQLRGFNFRGGFVLIPELAALTLALSIYTSTFI 275

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++RSG+ +VP GQ EAA +LGL H      V++PQA+R IIPPLTSQYLN++KNSSLA
Sbjct: 276 AEVIRSGIQSVPLGQHEAASSLGLPHTVTLHQVIIPQALRVIIPPLTSQYLNIVKNSSLA 335

Query: 342 VAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 336 AAIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|254512406|ref|ZP_05124473.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacteraceae bacterium KLH11]
 gi|221536117|gb|EEE39105.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacteraceae bacterium KLH11]
          Length = 410

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 159/393 (40%), Positives = 234/393 (59%), Gaps = 18/393 (4%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q+I A+ + +   +  NN+  N+  + L++   FL E AG++++Q +V Y 
Sbjct: 20  DTRYRSLTFQVIAAIAIALSIWYLGNNLIQNLRAAGLNISYAFLGETAGYDVNQRLVEYN 79

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+  A LVG +NT  +AF   I AT+ G + G  RLS N LV+ +  VYVE+FRNIP
Sbjct: 80  SQSSHGRAALVGLLNTLLVAFLACITATVFGVIAGVLRLSNNWLVSKLMAVYVEIFRNIP 139

Query: 141 PLVVIFFLYKSVLSVLPIPDH------SIVLPFGMF-LNNRGLSFPTLTMDT----NAKI 189
            L+ I  ++  + +VLP P+       S  + F  F   NRG+  P          +  +
Sbjct: 140 VLIWIIIIFTIMTAVLPAPNAFRGENPSSSMLFDAFAFTNRGVYLPKPEFANGLFGSTAL 199

Query: 190 FVFSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                +  +V S FATR     +    E+TG   P   + T  ++ +P  VL+ +   L 
Sbjct: 200 NWLLVIAALVGSWFATREIGKKATKKQEETGDR-PNTTLLTLAVWIVP-FVLLMIIMGLT 257

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           ++ P L +FNF GG  V    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALGL
Sbjct: 258 WNVPELKRFNFSGGLNVGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAGALGL 317

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAI 364
              +   LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+  ++GGT +NQTG+AI
Sbjct: 318 RSGRIMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGTTLNQTGRAI 377

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E +L+ M  YL+ S+ I++ MN  NA + LKE+
Sbjct: 378 ECVLLLMLFYLTASLTISMVMNVYNASVKLKER 410


>gi|300865205|ref|ZP_07110023.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
 gi|300336796|emb|CBN55173.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
          Length = 401

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/383 (39%), Positives = 226/383 (59%), Gaps = 2/383 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
           K L D R   ++ Q I A+L+ V      NN+  N+ +  ++LG  FL  +A F+I + I
Sbjct: 19  KLLRDDRFWKVAGQAIAAILVVVFAAIIWNNLTANLRQLGINLGFDFLGSQASFDIGESI 78

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +PY   +S+A A+LVG VN+F +   G++ ATI+G  VG  RLS N LV  +  +YVE+ 
Sbjct: 79  IPYNPSNSFAQAMLVGLVNSFRVMGVGLVTATIVGLTVGIARLSDNWLVRNLATIYVEIL 138

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN P L+ +FF Y +V   LP  + S       +L N G++ P LT +    +++    +
Sbjct: 139 RNTPLLLQLFFWYFAVFISLPRLESSTPFLGSFYLTNLGIAIPWLTGNPGTGLWLILLAV 198

Query: 197 GIVLSLFATRLSRHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQF 254
           GI+ +++  R       +TG A    ++ S  ++       +I        D P V+ + 
Sbjct: 199 GILAAVWLWRWRTRVRLETGAAGRQFIWASGAILLTAIIAFIITRNPPFTLDIPRVIERT 258

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
              GG  ++PEF +L   L+ YTA+FIAEIVR+G+ +VP+GQ EA  ALGL      RLV
Sbjct: 259 QLEGGLKLTPEFATLLTGLTLYTASFIAEIVRAGIQSVPQGQWEAGKALGLKSGLMMRLV 318

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R IIPPLTSQYLNL KNSSLAVA+G+ D+  V  T  NQTG+ +E++L+ M  Y
Sbjct: 319 ILPQALRVIIPPLTSQYLNLAKNSSLAVAIGYPDVYFVASTTFNQTGRVVEVMLLIMVTY 378

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L++S+ IA+ MN  N  + +KE+
Sbjct: 379 LTISLSIAIVMNLYNRSVQIKER 401


>gi|288959841|ref|YP_003450181.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912149|dbj|BAI73637.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 406

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/353 (42%), Positives = 212/353 (60%), Gaps = 4/353 (1%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +N   NME+  ++ G  FL   AGFEI + ++ Y    SYA A+LVG +NT  +A +G +
Sbjct: 58  SNTLANMERFGITPGFAFLGRPAGFEIGEALLDYRPQDSYALALLVGLLNTVKVAVAGCL 117

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT++G L+G  RLS N L++ + + YVE+ R+ P L+ +FF + +    LP P  ++  
Sbjct: 118 IATVLGVLLGVARLSGNALLSGLVQGYVELVRSTPLLLQLFF-WSATFQALPSPRQALNP 176

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
             G+FL NRG+  P           + +  L +VL+L  T L R    +    +P   + 
Sbjct: 177 LPGVFLCNRGIQLPAFADGRAGGALLAAIGLALVLALAGTALRRRMGLRD---VPSAAMV 233

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
               FGLP   L++    L  + P L  FNF GG+TVSPEF +L + L    AA IAEIV
Sbjct: 234 AAAAFGLPITPLLSSGVPLQVEFPELSGFNFNGGTTVSPEFSALLVGLVVNAAAMIAEIV 293

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ AVP GQ EAA ALGL  R+  +LV+LPQAMR I+P LTS YLNL KNSSLAVA+G
Sbjct: 294 RSGIQAVPAGQWEAARALGLPRRRIMQLVVLPQAMRVIVPLLTSSYLNLTKNSSLAVAIG 353

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           F DLVSV  T  NQTGQ +E + I M  YL++++ +++ MN  N ++A +  +
Sbjct: 354 FPDLVSVINTSANQTGQVLETMAIMMGAYLTMNLAVSVAMNLYNRRLAARGAR 406


>gi|126724900|ref|ZP_01740743.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2150]
 gi|126706064|gb|EBA05154.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2150]
          Length = 391

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/388 (40%), Positives = 227/388 (58%), Gaps = 12/388 (3%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q I A+ L +I  +  NNV  N+ K  L++   FL  +AG++I+Q ++PY+
Sbjct: 5   DTRYRSLTFQAIAAIALALIIFYLANNVATNLAKLGLNIDFSFLGAQAGYDINQTLIPYS 64

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S S+  +A  VG +NT  +AF   I ATI G L G  RLS N LV  +   YVE+FRNIP
Sbjct: 65  SQSTNLSAAFVGILNTLLVAFLACITATIFGVLAGVLRLSNNWLVRKLMSFYVEIFRNIP 124

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFVFS 193
            L+ I  +Y  +   L  P      + S  L  G+F   NRG+  P       + + V +
Sbjct: 125 VLIWILMIYGVMTISLSGPKAYLGAEPSKELFLGLFAFTNRGIYVPAPIWGPGSMVVVVT 184

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ---LHFDKPV 250
           F+L ++  +   R + +   +TGK LP   + T  I  +PT+ +  +  Q   L    P+
Sbjct: 185 FILSVIAVIAYRRYATNLLYRTGKLLPT-GLPTIAILLIPTIFMFFVMGQPIGLDLPDPL 243

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             +FN  GG  +    ++++ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL   + 
Sbjct: 244 ANRFNLRGGLQIGAPLIAIWFALSIYTGAFIAENVRAGIQAVSKGQTEAAAALGLRSARI 303

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILI 369
             LV+LPQA+R IIPPL SQYLN+ KNSSLA+ VG+AD+  ++GG  +NQTG+AIE IL+
Sbjct: 304 MSLVVLPQALRVIIPPLISQYLNITKNSSLAILVGYADVTATLGGITLNQTGRAIECILL 363

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M  YL +S+ I+  +N  N  I LKE+
Sbjct: 364 LMLFYLIISLTISSVINVYNNSIKLKER 391


>gi|238798511|ref|ZP_04641990.1| L-amino acid ABC transporter permease protein [Yersinia mollaretii
           ATCC 43969]
 gi|238717673|gb|EEQ09510.1| L-amino acid ABC transporter permease protein [Yersinia mollaretii
           ATCC 43969]
          Length = 400

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/371 (42%), Positives = 221/371 (59%), Gaps = 5/371 (1%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  L+L     + ++N   N+    ++ G  FL+  AGF I Q ++ Y    +Y    
Sbjct: 32  QIIALLILIGCGAYLIHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYKQGDTYGRVF 91

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            VG  NT  ++   +  A+I+G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 92  FVGLFNTLLVSVLCIFFASILGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 151

Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
            +VL  LP P  S+   FG+ FL+NRGL  P+          + + +L +  ++FA    
Sbjct: 152 FAVLRNLPGPRQSMD-AFGVAFLSNRGLYLPSPEWAAGFMPALIAVLLAVA-AMFALYRY 209

Query: 209 RHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            HF +  TG+      I   L+  LP L        LH+D P L  FNF GG  + PE  
Sbjct: 210 NHFRQLHTGQFHRTWPIGLLLLIALPALSHFMFGPALHWDIPELRGFNFKGGLVLIPELA 269

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L +    R V+LPQA+R IIPPL
Sbjct: 270 ALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSLALPNTVTLRQVILPQALRVIIPPL 329

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           TSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+  MN
Sbjct: 330 TSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFLMN 389

Query: 387 RLNAKIALKEK 397
             N +IAL E+
Sbjct: 390 IYNRRIALVER 400


>gi|312170821|emb|CBX79081.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 392

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 154/357 (43%), Positives = 217/357 (60%), Gaps = 3/357 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N  NN+    ++ G  FL   AGF I Q ++ Y+   SYA   LVG  NT  ++  
Sbjct: 37  YLIHNTTNNLASRGITSGFSFLERSAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  +G  RLS N L+  +  +YVE FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CILFASLLGFFIGLARLSGNWLLRKLSTIYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P          F+ + +L + +S    R ++    KTG+ L   
Sbjct: 157 LNAFDLAFVSNRGLYIPWPEYAAGTVPFLLALLLAMAISSALFRYNKQRQLKTGR-LRRT 215

Query: 223 YISTFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +T  +  L  L  I L    +H+D P L  FNF GG  + PE  +L +ALS YT+ FI
Sbjct: 216 WPATVAMLALFPLATIMLAGSPMHWDIPQLHGFNFRGGFALIPELAALTLALSIYTSTFI 275

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++RSG+ +VP GQ EAA +LGL        V++PQAMR IIPPLTSQYLN++KNSSLA
Sbjct: 276 AEVIRSGIQSVPLGQHEAASSLGLPRAVTLHQVIIPQAMRVIIPPLTSQYLNIVKNSSLA 335

Query: 342 VAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 336 AAIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|307129010|ref|YP_003881026.1| putative transport system permease [Dickeya dadantii 3937]
 gi|306526539|gb|ADM96469.1| Putative transport system permease protein [Dickeya dadantii 3937]
          Length = 392

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/356 (42%), Positives = 220/356 (61%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+ +  ++ G  FL+  A F I Q ++ Y    +YA   +VG +NT  ++  
Sbjct: 37  YLLHNTVTNLAQRGITSGFAFLNNSADFGIVQHLIDYEQGDTYARVFVVGLLNTLLVSAI 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G +VG  RLS N L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CIVCASLLGFIVGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      FL+NRGL  P       A   + + ++ +V+     R ++ +H  TG+     
Sbjct: 157 VNALDTFFLSNRGLYIPAAEFGPGALPSILALIIALVVGAMIFRRNKRYHALTGQQRRSW 216

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            I   ++  L  L  +     LH+D PVL  FNF GG  + PE  +L +ALS YT++FIA
Sbjct: 217 PIPLAVLVVLLGLSHLIFGRALHWDFPVLKGFNFSGGMVLIPELAALALALSVYTSSFIA 276

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+RSG+ +V  GQ EAA++LGL      R V+LPQA+R IIPPLTSQYLN++KNSSLA 
Sbjct: 277 EIIRSGIQSVSYGQHEAALSLGLPKPVTLRKVILPQALRVIIPPLTSQYLNVVKNSSLAA 336

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLLISLLMNIYNRKIALIER 392


>gi|149203334|ref|ZP_01880304.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035]
 gi|149143167|gb|EDM31206.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035]
          Length = 404

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/393 (39%), Positives = 221/393 (56%), Gaps = 8/393 (2%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F     +YD R  + + Q I  +LL ++  +   N+ NN+     ++  GFLS  A ++I
Sbjct: 12  FQLSMLIYDTRYRSYTFQFIALVLLMLLLGYLGANLVNNLAAQGQNISFGFLSNPANYDI 71

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q  + Y S SS+  A LVG +NT  +AF G   ATI G   G  RLS N LV  +   Y
Sbjct: 72  NQRPIEYDSQSSHLRASLVGVINTLIVAFLGCATATIFGVTAGVLRLSPNWLVRKLMAFY 131

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDH------SIVLPFGMF-LNNRGLSFPTLTMDT 185
           VE+FRNIP L+ I  ++  + +VLP P+          + F  F   NRG+  P      
Sbjct: 132 VEIFRNIPVLIWILIIFTVMTAVLPSPNQFRGDNADASMLFDAFAFTNRGIYTPAPVWGP 191

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            + + V +F+  I       R +      TG+ LP+ + S  ++F    L+   L   + 
Sbjct: 192 GSLVVVLTFLASIFGVFAYRRYATKLLYDTGRLLPMGWPSLVILFVPTILIYFVLGQPIS 251

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            + P L  FNF GG  +    ++L+ AL+ YT AFIAE VR+G+ AV +GQ EAA +LGL
Sbjct: 252 LNYPALKGFNFDGGLHIRGSLIALWFALAIYTGAFIAENVRAGIQAVSKGQTEAAASLGL 311

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAI 364
              +   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+  ++GG  +NQTG+AI
Sbjct: 312 RPNRIMNLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQTGRAI 371

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E +L+ M  YL++S+ I+  MN  N  I LKE+
Sbjct: 372 ECVLMLMLFYLTISLAISAIMNVYNNSIKLKER 404


>gi|292486753|ref|YP_003529623.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900845|ref|YP_003540214.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291200693|emb|CBJ47826.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552170|emb|CBA19207.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 392

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 149/356 (41%), Positives = 214/356 (60%), Gaps = 1/356 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N  NN+    ++ G  FL   AGF I Q ++ Y+   SYA   LVG  NT  ++  
Sbjct: 37  YLIHNTTNNLASRGITSGFSFLERSAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  +G  RLS N L+  +  +YVE FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CILFASLLGFFIGLARLSGNWLLRKLSTIYVETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P          F+ + +L + +S    R ++    KTG+     
Sbjct: 157 LNAFDLAFVSNRGLYIPWPEYAAGTVPFLLALLLAMAISSALFRYNKQRQLKTGRLRRTW 216

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +  ++   P   ++     +H+D P L  FNF GG  + PE  +L +ALS YT+ FIA
Sbjct: 217 PAAVAMLALFPLATIMLAGSPMHWDIPQLHGFNFRGGFALIPELAALTLALSIYTSTFIA 276

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++RSG+ +VP GQ EAA +LGL        V++PQAMR IIPPLTSQYLN++KNSSLA 
Sbjct: 277 EVIRSGIQSVPLGQHEAASSLGLPRAVTLHQVIIPQAMRVIIPPLTSQYLNIVKNSSLAA 336

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 337 AIGYPDMVSLFAGTVLNQTGQAIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|254452143|ref|ZP_05065580.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
 gi|198266549|gb|EDY90819.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
          Length = 410

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/405 (40%), Positives = 235/405 (58%), Gaps = 26/405 (6%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F   + +YD R  +I++Q+I  +LL     W VNN   N+         GFL++ AG++I
Sbjct: 12  FRLSQLIYDTRYRSITIQVIATILLLAGIYWLVNNTIQNLAALGKDFDFGFLTQPAGYDI 71

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q +V YTS S++  A +VG +NT  +AF G + AT +G   G  RLS N +V+ +  VY
Sbjct: 72  NQRLVEYTSQSTHGMAAVVGILNTLLVAFLGCLLATFLGVTAGVLRLSNNWVVSRLMAVY 131

Query: 133 VEVFRNIPPL---VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN------NRGLSFPTLTM 183
           VE FRN+P L   + I  L    +S   I +  +    GM LN      NRG+  P + +
Sbjct: 132 VEGFRNVPLLLWIIAIMALMTEGMS--RIREFRVGGDAGMILNDSVAVTNRGVYIPGIIL 189

Query: 184 D-----TNAKIFVFSFVLGIVLSLFATRLSRH----FHEKTGKALPLLYISTFLIFGLPT 234
           +     ++A  ++   V+ +V+SLF  R  R       E TG   P  +     I  +P 
Sbjct: 190 ENGFLASSAMNWLILLVI-LVISLFVIRGIRRRANAVQEDTG-VRPTTWYQQLSILIVPV 247

Query: 235 -LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV+I +  +L +  P L  FNF  G  +    ++L++ALS YT AFIAEIVR+G++A+ 
Sbjct: 248 GLVMILMGAELQY--PELRGFNFSDGIHLRNSLIALWLALSLYTGAFIAEIVRAGILAIS 305

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-V 352
           +GQ EAA ALGL   + T LV+LPQAMR IIPPL SQYLNL KNSSLA+AVG+ D+ S +
Sbjct: 306 KGQSEAAFALGLRPNRTTSLVILPQAMRVIIPPLISQYLNLTKNSSLAIAVGYMDVRSTL 365

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GG  INQTG+ +E +L+    YL LS++I+  MN  N +  L+E+
Sbjct: 366 GGITINQTGRELEGMLLLGAFYLVLSLVISGAMNVYNNRTQLQER 410


>gi|218510921|ref|ZP_03508799.1| binding-protein dependent transport system inner membrane protein
           [Rhizobium etli Brasil 5]
          Length = 409

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/397 (38%), Positives = 220/397 (55%), Gaps = 9/397 (2%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCV---NNVYNNMEKSNLSLGI 61
           +RK     FS+  FL  +R        + A+ L  +   C    NNV   M++  L LG 
Sbjct: 17  SRKRYEPGFSKPGFLASVRQWLGPSPFLQAVFLFAVLAVCWYLGNNVVETMQRLGLRLGF 76

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FLS+RA FEI + ++ Y+S  +YA A+L G +NT  +AF   + AT+ G ++G  RLS 
Sbjct: 77  AFLSQRANFEIGESLITYSSSDTYARALLAGLLNTINVAFFACVIATVCGVMLGVARLSG 136

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           N ++A + R YVE+FRN P L++  FL+ ++   LP P  ++    G FL+NRG+  P L
Sbjct: 137 NLVLASVVRAYVEIFRNTP-LLLQLFLWSAIFHSLPAPRRALEFSGGFFLSNRGIFIPRL 195

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
             D     F++  +      +      R F  +   A  +L +S  +       V  A  
Sbjct: 196 IFD-GPSAFIWLPLAAAAAGVTIIIARRLFFGQRFYATRILVLSVAMF----AAVCWATG 250

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             +  + PV G FN  GG +++PEF  L   L    AA IAEIVRSG+ +V  GQ EAA 
Sbjct: 251 VSISAEPPVRGGFNISGGMSLTPEFAGLLTGLVFNAAATIAEIVRSGIQSVGNGQWEAAR 310

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL      RL++LPQA+R I P +TS YL+L KNSSLAVA+GF DLVSV  T  N TG
Sbjct: 311 ALGLRPGHIMRLIVLPQALRVITPLMTSSYLDLTKNSSLAVAIGFPDLVSVANTTANTTG 370

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           Q +E I I    YL+L++ +++ MN  N +I L+E++
Sbjct: 371 QTLEAITIIAVAYLTLNLAVSVLMNLYNRRIMLREER 407


>gi|313902269|ref|ZP_07835674.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467420|gb|EFR62929.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 392

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/348 (41%), Positives = 204/348 (58%), Gaps = 1/348 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           +   NV  N+++  ++ G  FL   A F I +  +PY +   Y  A L G VNT  +A  
Sbjct: 37  YLFGNVQRNLQQLGITPGFDFLRHPASFAIGESSIPYQATDPYGRAFLAGLVNTLRVAVL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
           G++ AT +G + G  RLSAN LV  +  +YVEV RN P L+ +FF Y +++  LP    +
Sbjct: 97  GVVLATAVGVVAGLARLSANGLVRLLASLYVEVTRNTPLLLQLFFWYGAIVYTLPPASQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PL 221
           + LP  +FL NRGL  P           V    L +V +  A R+      + G+A  P 
Sbjct: 157 LALPGSVFLMNRGLVLPAPRPGPGFPTAVAILGLALVAAATAYRILLRKRLEEGRATRPG 216

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L     L  G     ++     L  ++P L +FNF GG  +S EF +L +AL  YT AFI
Sbjct: 217 LVALGLLAAGGLAAAILPAGPALVLERPQLARFNFQGGLMLSAEFTALLLALVIYTGAFI 276

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+VR G++AVPRGQ EAA +LGL+     RLV+ PQA+R I+PPLTSQYLNL+KNSSLA
Sbjct: 277 AEVVRGGVLAVPRGQWEAARSLGLSPFLVQRLVVFPQALRIIVPPLTSQYLNLIKNSSLA 336

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +AV F DL++V  TI+NQTG+ +E++L+    YL+ S++ +L MN  N
Sbjct: 337 MAVAFPDLLNVSSTIVNQTGRTLEMLLLVGATYLAFSLLTSLLMNLYN 384


>gi|259416750|ref|ZP_05740670.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Silicibacter sp. TrichCH4B]
 gi|259348189|gb|EEW59966.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Silicibacter sp. TrichCH4B]
          Length = 422

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/410 (36%), Positives = 235/410 (57%), Gaps = 34/410 (8%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R  + ++Q++  +   ++    ++N  +N+          FLSE AG++I+Q ++
Sbjct: 17  LIYDTRYRSATIQVVAMIGFMILIGSIISNTVHNLTDLGKEPSFSFLSEPAGYDINQRLL 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y +  S+  A L+G +NT  +A  G I ATI+G ++G  RLS+N LVA +  +YVE+FR
Sbjct: 77  DYDNQDSHMRASLIGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVARLMTIYVEMFR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIP---------------------DHSIVLPFGMFLNNRG- 175
           N+P L+ I F+   ++  LP P                     +  + +P  +F N+ G 
Sbjct: 137 NVPVLLWIVFIMAILIETLPAPRAFRGDAPEATMSVFDSVAVTNRGVYVPEPLFHNSLGN 196

Query: 176 ---LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF----HEKTGKALPLLYISTFL 228
                   L  D +  +  F  VLG   SL+A+   R +     E TG+   + +I   +
Sbjct: 197 VHVFGDSALRFDVSLDLMAFLIVLGG--SLYASMRIRKWADALQESTGRRPTIWHIRAAV 254

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +     L+++ L +  H   P L  FNF GG+ +    ++L++ALS YTAAFIAEIVRSG
Sbjct: 255 VIVPSALLMLVLGF--HLGYPELKGFNFSGGTHLRNSLIALWLALSLYTAAFIAEIVRSG 312

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++A+ +GQ EAA ALGL  ++   LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ D
Sbjct: 313 ILAISKGQTEAAAALGLRPKRIMNLVVLPQALRVIIPPLISNYLNLTKNSSLAIAVGYMD 372

Query: 349 LV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L  ++ G  +NQTG+ +E +L+ M +YL++S++I+  MN  N ++ L E+
Sbjct: 373 LTGTLMGITMNQTGRELETVLLGMLVYLTISLLISSAMNWYNNRVKLVER 422


>gi|302339787|ref|YP_003804993.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636972|gb|ADK82399.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 389

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/359 (38%), Positives = 216/359 (60%), Gaps = 15/359 (4%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N   N+   N+ +G GF+ E AGF I Q ++ YT   ++    ++G +NT   +  G++ 
Sbjct: 29  NYIRNITSRNIGIGFGFMHETAGFSISQTLISYTESDTFGRTFVIGLLNTLVASIIGIVL 88

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVL 165
           AT++G L+G  RLS NKL+  +  VYVEV RNIPPL+ + F Y+ V L+VLP    S  L
Sbjct: 89  ATLLGFLIGLMRLSKNKLIHNVAVVYVEVLRNIPPLLHVLFWYQVVFLNVLPPFKESFKL 148

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS-----RHFHEKTGKALP 220
              +++N RG++ P+    T+A  F   F + IV   +   +      R  H+K      
Sbjct: 149 GNWLYINVRGITIPSFIPQTSATTFRILFFVSIVAIFYIGYVKKKMVLRGVHKK------ 202

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  +   ++  L     IA  +Q+    P + +F F  G+T+ PE  S+ +AL  YT+ +
Sbjct: 203 LWPLQLAILLALVLFAAIAKPFQIVL--PEITKFKFSSGTTIRPELFSVVVALGTYTSTY 260

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I+E VRS +IAVP+GQ+EAA +LG    +  +L+++PQAMR++IPP+T+QYLNL+KN+SL
Sbjct: 261 ISEAVRSSIIAVPKGQLEAAKSLGFNRYRRLQLIIIPQAMRTMIPPVTNQYLNLIKNTSL 320

Query: 341 AVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +AV + DL SV  GT +NQTG+A+E++ + M  YLS+S++ +L MN  N  I  K+ +
Sbjct: 321 GMAVAYPDLTSVFAGTTLNQTGRALEVMSLVMLTYLSISLVTSLLMNWYNRSIINKKGE 379


>gi|255263937|ref|ZP_05343279.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Thalassiobium sp. R2A62]
 gi|255106272|gb|EET48946.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Thalassiobium sp. R2A62]
          Length = 398

 Score =  243 bits (620), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 161/398 (40%), Positives = 229/398 (57%), Gaps = 21/398 (5%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D R  +++ Q+I A+ L    L+  NN+  N+    LS+   FL   AG++I+Q ++ 
Sbjct: 3   LNDTRYRSLTFQVIAAIALAFSILYLANNLARNLADQGLSISFAFLGAPAGYDINQRLIE 62

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YTS S+   A  VG +NT  +AF   + ATI G L G  RLS N LVA I   YVE+FRN
Sbjct: 63  YTSQSTNLRAAFVGILNTLLVAFLACVTATIFGVLAGVLRLSKNWLVAKIMAFYVEIFRN 122

Query: 139 IPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGM-FLNNRGLSFPT--LTMDTNAK- 188
           IP L+ I  ++  + +VLP P      D +  +  G+    NRG+  P    T    A  
Sbjct: 123 IPVLIWIIIIFTIMTAVLPGPRAFRGDDATASMFLGVSAFTNRGIYIPGPYFTRGFGAAE 182

Query: 189 ---IFVFSFVLGI-VLSLFATRL----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              ++ +  VLG+ V S F  R     +    E TG     L  +  + FG   L+++AL
Sbjct: 183 LGAVWDWVLVLGLLVASFFGARAVNARATRIQEATGIRPATLTTNLAIWFG--PLIVVAL 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L F+ P L  FNF GG  V    ++++ ALS YT AFIAE VR+G++AV +GQ EAA
Sbjct: 241 ALGLTFEIPELKGFNFKGGIKVGGPLIAIWFALSIYTGAFIAENVRAGILAVSKGQTEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQ 359
            ALG+   +   LV+LPQA+R IIPPL S YLN+ KNSSLA+ VG+AD+  ++GG  +NQ
Sbjct: 301 AALGIRPGRIMSLVILPQALRVIIPPLISNYLNITKNSSLAILVGYADVTATLGGITLNQ 360

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG+AIE +L+ M  YL +S++I+  +N  N  + LKE+
Sbjct: 361 TGRAIECVLLLMLFYLVISLLISGIINIYNNSVKLKER 398


>gi|254440396|ref|ZP_05053890.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198255842|gb|EDY80156.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 410

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 154/402 (38%), Positives = 230/402 (57%), Gaps = 20/402 (4%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F   + +YD R  +I++Q+I  +LL     W VNN   N+         GFL++ AG++I
Sbjct: 12  FQLSQLIYDTRYRSITIQVIATILLIAGIYWLVNNTIQNLAALGKDFDFGFLTQPAGYDI 71

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q +V Y+S S++  A  VG +NT  +AF G + AT++G   G  RLS N +V+ +  VY
Sbjct: 72  NQRLVEYSSQSTHGRAAFVGILNTLLVAFLGCVLATVLGVTAGVLRLSNNWVVSRLMAVY 131

Query: 133 VEVFRNIPPL---VVIFFLYKSVLSVLPI----PDHSIVLPFGMFLNNRGLSFPTLTMDT 185
           VE FRN+P L   + I  L    +S +       D S++L   + + NRG+  P + ++ 
Sbjct: 132 VEGFRNVPLLLWIIAIMALMTEGMSRIREFRVGGDASMILNDSVAVTNRGVYIPGIILEN 191

Query: 186 --------NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LV 236
                   N  I +   V+ +++     + S    E TG   P  +     I  +P  LV
Sbjct: 192 GFLASSAMNWLILLVILVVSLIVIRGVRKRSDAVQEDTG-VRPNTWYQQLAILIIPVGLV 250

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           ++ +  +L +  P L  FNF  G  +    ++L++ALS YT AFIAEIVR+G++A+ +GQ
Sbjct: 251 MVLMGAELQY--PELRGFNFSDGIHLRNSLIALWLALSLYTGAFIAEIVRAGILAISKGQ 308

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGT 355
            EAA ALGL   + T LV+LPQAMR IIPPL SQYLNL KNSSLA+AVG+ D+ S +GG 
Sbjct: 309 SEAAFALGLRPNRTTNLVILPQAMRVIIPPLISQYLNLTKNSSLAIAVGYMDVRSTLGGI 368

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            INQTG+ +E +L+    YL +S+ I+  MN  N +  L+E+
Sbjct: 369 TINQTGRELEGMLLLGAFYLLVSLAISGAMNVYNNRTQLQER 410


>gi|238789894|ref|ZP_04633674.1| L-amino acid ABC transporter permease protein [Yersinia
           frederiksenii ATCC 33641]
 gi|238721967|gb|EEQ13627.1| L-amino acid ABC transporter permease protein [Yersinia
           frederiksenii ATCC 33641]
          Length = 392

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 157/371 (42%), Positives = 220/371 (59%), Gaps = 5/371 (1%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  L+L     + ++N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 24  QIIALLILIGCGAYLIHNTLTNLSTRGITSGFAFLHNSAGFGIVQHLIDYQQGDTYGRVF 83

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG +NT  ++   +  A+I+G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y
Sbjct: 84  LVGLLNTLLVSVLCIFFASILGFFLGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWY 143

Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
            +VL  LP P  S+   FG+ FL+NRGL  P+          + + +L     +   R +
Sbjct: 144 FAVLRNLPGPRQSLD-AFGVAFLSNRGLYLPSPEFAAGFFPALLAVLLAAAFIIALARYN 202

Query: 209 RHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            HF +  TGK      +   L+  LP L  +     LH+D P L  FNF GG  + PE  
Sbjct: 203 -HFRQLHTGKFHRSWPMGLLLLIVLPALAHLLYGPALHWDLPQLKGFNFKGGLVLIPELA 261

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L +    R V+LPQA+R IIPPL
Sbjct: 262 ALTLALSVYTSTFIAEVIRSGIQSVPHGQHEAARSLALPNTVTLRQVILPQALRVIIPPL 321

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           TSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+  MN
Sbjct: 322 TSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFLMN 381

Query: 387 RLNAKIALKEK 397
             N +IAL E+
Sbjct: 382 LYNRRIALVER 392


>gi|326204745|ref|ZP_08194600.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
 gi|325985116|gb|EGD45957.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
          Length = 389

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 146/393 (37%), Positives = 228/393 (58%), Gaps = 7/393 (1%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
           RKT T  ++  K      V  I +Q +  ++L ++ ++ ++N    ++K  + LG  FL+
Sbjct: 3   RKTTTPLWNNKK------VIPIILQAVFLIVLILLSVFFISNASKGLQKIGIKLGFDFLN 56

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
             AGF ID  ++ YT   SY  A+LVG  NT  +   G++ + I+G  +G GRLS N LV
Sbjct: 57  STAGFSIDDRLINYTPSDSYGRALLVGLFNTLKVGLVGIVISGILGLFIGIGRLSNNWLV 116

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             +   YVEV RN P L+ IF LY +V    P  + +I     +F +NRG + P  T + 
Sbjct: 117 KKLTGGYVEVIRNTPLLIQIFILYFAVFLPFPQIERNINFKNIIFFSNRGTAIPWFTTNQ 176

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQL 244
           ++ I++   ++G+  ++   ++      + GK + P+ +    ++  +    ++     L
Sbjct: 177 SSGIWLIFAMIGLAAAIVLWKVVLKKQVEIGKNMHPMAWSIGAVLITVIVAYVVTNSPPL 236

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P + +  F GG  +S EF S+   L  Y +AFIAEIVR+G++AVP+GQ+EA  ALG
Sbjct: 237 QISIPEINKMAFRGGYVLSSEFASILCGLFIYHSAFIAEIVRAGIMAVPKGQIEATKALG 296

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      RLV+LPQA R IIP +TSQ+LNL KNS+LA+AVG+ DL S+G TIINQTGQ+I
Sbjct: 297 MKKGATMRLVILPQAFRVIIPSVTSQFLNLFKNSTLAIAVGYTDLFSIGNTIINQTGQSI 356

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +I+++   IYL +S++I+  MN  N    L E+
Sbjct: 357 QIMILMASIYLIVSLVISFLMNCFNNYYKLVER 389


>gi|85703852|ref|ZP_01034955.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. 217]
 gi|85671172|gb|EAQ26030.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. 217]
          Length = 418

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 152/394 (38%), Positives = 224/394 (56%), Gaps = 10/394 (2%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F     +YD R  + + Q I  +LL ++  +   N+ +N+     ++  GFLS+ AG++I
Sbjct: 26  FQLSMLIYDTRYRSYTFQFIALMLLLLLLGYLGANLVSNLAAQGQNISFGFLSDPAGYDI 85

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q  + Y S SS+  A +VG +NT  +A  G   AT+ G   G  RLS N LV  +  VY
Sbjct: 86  NQRPIEYDSQSSHMRASVVGVINTLIVAVLGCATATLFGVTAGILRLSPNWLVRKLMAVY 145

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIP--------DHSIVLPFGMFLNNRGLSFPTLTMD 184
           VE FRN+P L+ I  +   + + +P P        D S++L    F  NRG+  P     
Sbjct: 146 VEAFRNVPVLIWILIIATIMTASMPSPNQFRGDNADASMLLDAFAF-TNRGVYVPAPVWG 204

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             + + V +F+  I    +  R +      TG+ LP+ + S  ++F    L+   L   +
Sbjct: 205 AGSLVVVLTFLASIAGVFYYRRYATKLLYDTGRLLPMGWPSLVILFVPTILIFFVLGQPI 264

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D P L  FNF GG  +    ++L+ AL+ YT AFIAE VR+G+ AV +GQ EAA +LG
Sbjct: 265 TLDYPALKGFNFDGGLHIRGSLIALWFALAIYTGAFIAENVRAGIQAVSKGQTEAAASLG 324

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQA 363
           L  ++   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+  ++GG  +NQTG+A
Sbjct: 325 LRPKRIMNLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQTGRA 384

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE +L+ M  YL++S+ I+  MN  N  I LKE+
Sbjct: 385 IECVLMLMLFYLTISLAISAVMNVYNNTIKLKER 418


>gi|238782939|ref|ZP_04626967.1| amino-acid ABC transporter permease protein yhdX [Yersinia
           bercovieri ATCC 43970]
 gi|238716142|gb|EEQ08126.1| amino-acid ABC transporter permease protein yhdX [Yersinia
           bercovieri ATCC 43970]
          Length = 400

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/370 (42%), Positives = 219/370 (59%), Gaps = 3/370 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QII  L+L     + ++N   N+    ++ G  FL+  AGF I Q ++ Y    +Y    
Sbjct: 32  QIIALLILIGCGAYLIHNTITNLSTRGITSGFAFLNNSAGFGIVQHLIDYEQGDTYGRVF 91

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG  NT  ++   +  A+I+G  +G  RLS N L+  +  VY+E FRNIPPL+ IFF Y
Sbjct: 92  LVGLFNTLLVSVLCIFFASILGFFIGLARLSDNWLLRKLSTVYIETFRNIPPLLQIFFWY 151

Query: 150 KSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
            +VL  LP P  S+   FG+ FL+NRGL  P+          + + +L +   +   R +
Sbjct: 152 FAVLRNLPGPRQSMD-AFGVAFLSNRGLYLPSPEFAAGFIPALVAVLLAVAAIIALYRYN 210

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                 TG+      +   L+  LPTL  +     LH+D P L  FNF GG  + PE  +
Sbjct: 211 HFRQRHTGQFHRTWPLGLLLLIALPTLAHLMFGPALHWDIPELRGFNFKGGLVLIPELAA 270

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L L +    R V+LPQA+R IIPPLT
Sbjct: 271 LTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSLALPNTVTLRQVILPQALRVIIPPLT 330

Query: 329 SQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           SQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ I+  MN 
Sbjct: 331 SQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLSISFLMNL 390

Query: 388 LNAKIALKEK 397
            N +IAL E+
Sbjct: 391 YNRRIALVER 400


>gi|86605965|ref|YP_474728.1| polar amino acid ABC transporter permease [Synechococcus sp.
           JA-3-3Ab]
 gi|86554507|gb|ABC99465.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. JA-3-3Ab]
          Length = 390

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/358 (38%), Positives = 212/358 (59%), Gaps = 15/358 (4%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
            N+  ++ +  +SLG  FL   A F I +G++PY    SY  A+ VG VNT WL+   ++
Sbjct: 42  QNLLASLRRLGISLGFRFLDNSANFGITEGLIPYDPSESYLKALAVGAVNTLWLSAVSIV 101

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT +G ++G  RLS+N L   +  V  E+FRN+P L+++ F Y+ V+  LP   +S+ +
Sbjct: 102 LATAMGFVLGMARLSSNWLARQLATVVTEIFRNVPVLLIVIFWYQGVILTLPGVRNSLSI 161

Query: 166 PFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKAL 219
              +F+N RG+  P L        A   V +   GI   L   R    SR  +      +
Sbjct: 162 GGLVFINQRGVKLPGLDPSGWLVPALAIVIAAGWGIRKLLLVCRPELGSRQRNLWVAAGV 221

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            LL ++ +++F  P +           D PVL +FNF GG  +S EF ++ + L  YT  
Sbjct: 222 VLLAVACWVLFPEPPV---------RLDVPVLERFNFRGGIQLSAEFTAMMLGLVTYTGC 272

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE+VR   +AVPRGQ EAA A+GL+  +  RLV++PQA+R +IP L +QYL L+KNSS
Sbjct: 273 YIAEVVRGSFLAVPRGQWEAARAVGLSELQTFRLVIVPQALRIMIPSLNTQYLTLIKNSS 332

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LA+AVGF+DL ++  TIINQ+G+++E+  I M  YL+ +++++  MN LNA++ L E+
Sbjct: 333 LAIAVGFSDLFNISSTIINQSGRSVEMFAILMATYLTFNLVVSYGMNWLNARVKLVER 390


>gi|258545567|ref|ZP_05705801.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
 gi|258519267|gb|EEV88126.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
          Length = 387

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 153/364 (42%), Positives = 221/364 (60%), Gaps = 11/364 (3%)

Query: 42  LWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF 101
           LW   N   NM    L     FL   AGF + Q ++PY    SY    ++G +NT  ++ 
Sbjct: 27  LW--RNTAANMAARGLVFSFAFLDNPAGFAVSQHLLPYQESDSYGWLFVIGLLNTLLVSL 84

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
             ++ AT++G +VG  R+S N L+  +  VYVEVFRNIP L+ +FF Y +VL+VLP P  
Sbjct: 85  LAIVAATLVGVVVGVLRVSRNWLLRKLAAVYVEVFRNIPLLLQLFFWYFAVLAVLPAPRS 144

Query: 162 SIVLPFGM-------FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           S  L  G         L+NRGLS       +  +  +    +G+VL++   R +R    +
Sbjct: 145 S-TLRLGCDEAGCLAVLSNRGLSLIAPLWQSALQTALALCAVGVVLAVLLARWNRRRQAQ 203

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           +G+ L L +    LI  LP      L       +P+L  FNF GG T+ PE M+L++ALS
Sbjct: 204 SGQVLRLWWAYALLIVALPLAAFALLVEPSQLSRPLLQGFNFRGGVTLLPELMALWLALS 263

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            Y+A++IAE VRSG+ +VPRGQ EAA ALGL   +  RLV+LPQA+R ++PP+TSQ+LN+
Sbjct: 264 LYSASYIAEYVRSGIASVPRGQYEAAEALGLPPARVMRLVILPQALRVMVPPMTSQFLNI 323

Query: 335 LKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +KNSSLA A+ + DLVSV  GT +NQTG+A+EII + M +YL++S++I+L M   N +I 
Sbjct: 324 VKNSSLATAIAYPDLVSVFTGTALNQTGRAVEIIGLTMAVYLAISLLISLAMGVYNRRIR 383

Query: 394 LKEK 397
           + E+
Sbjct: 384 IVER 387


>gi|86135804|ref|ZP_01054383.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseobacter sp. MED193]
 gi|85826678|gb|EAQ46874.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseobacter sp. MED193]
          Length = 395

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 235/396 (59%), Gaps = 24/396 (6%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q I AL+L +   +  NN+  N+  + L++   FL +RAG++I+Q ++ Y 
Sbjct: 5   DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYNFLGDRAGYDINQHLIDYD 64

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+A+A +VG +NT  +AF   I AT+ G + G  RLS N LV+ +  VYVE+FRNIP
Sbjct: 65  SQSSHASAAVVGILNTLLVAFLACITATVFGVVAGVLRLSNNWLVSKLMAVYVEIFRNIP 124

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTN------- 186
            L+ I  ++  + +V+P P      D S  +   +F   NRG+  P    ++        
Sbjct: 125 VLIWIIIIFTIMTAVMPGPREFRGDDPSASMVLDLFAFTNRGVYTPMPMFESGLFASAAL 184

Query: 187 AKIFVFSFVLGIVLSLFATRL----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             + V  F++G   S F  R+    +    E TG     L+I+  L   +    L+ L  
Sbjct: 185 NWLLVLVFLIG---SFFVMRMVNANATQKQEATGIRPNTLFIN--LAVWIVPFALLMLVM 239

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA A
Sbjct: 240 GLTWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAAA 299

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTG 361
           LG+   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+  ++GG  +NQTG
Sbjct: 300 LGMRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGVTLNQTG 359

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +AIE +L+ M  YL++S++I++ MN  NA + LKE+
Sbjct: 360 RAIECVLLLMLFYLTVSLLISMVMNVYNASVKLKER 395


>gi|254456261|ref|ZP_05069690.1| amino acid ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083263|gb|EDZ60689.1| amino acid ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
          Length = 351

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 158/353 (44%), Positives = 216/353 (61%), Gaps = 9/353 (2%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111
           ME   ++ G GFLS+ + F++   ++ +    SY  A LVG +NT  ++  G+I ATIIG
Sbjct: 1   MENRGITFGYGFLSQESSFDVQFSLIEFDGSHSYFRAYLVGLLNTILVSVIGIIFATIIG 60

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF- 170
            +VG  RLS N L+     VYVE FRNIP L+ IFF Y + L  LP+P  +  + FG+F 
Sbjct: 61  IVVGIARLSNNYLIERTAAVYVEFFRNIPLLLQIFFWYFAALRALPLPQDAEPM-FGVFF 119

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           L  +G   P    + N  IF++S +  ++  +F    +R   EK G   P+L IS  L+ 
Sbjct: 120 LTIKGFFVPAFVWN-NLDIFIYSVIAALISIIFIRIYARKKQEKDGVQTPVLSISIGLLL 178

Query: 231 GLPTLVLIALKYQLHFDKPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            LP L  +        + PV+ Q     F + GG  + PE +SL +ALS YTA FIAE V
Sbjct: 179 ILPILSFLFGGVDTSIEVPVIKQLSQSGFTYEGGIKLPPELISLALALSLYTATFIAECV 238

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  V +GQ EAA ++GLT  +  +LV++PQA+R IIPP T+QYLNL KNSSLA A+ 
Sbjct: 239 RAGVQGVSKGQKEAAASIGLTPNQVLKLVVMPQALRIIIPPTTNQYLNLTKNSSLAAAIA 298

Query: 346 FADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + DLV V  GT + QTG+AIEI+ I M  YLSLSI I++FMN  N KIA+KEK
Sbjct: 299 YPDLVLVFAGTALMQTGRAIEIVSITMLTYLSLSISISIFMNWYNKKIAIKEK 351


>gi|254463434|ref|ZP_05076850.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacterales bacterium HTCC2083]
 gi|206680023|gb|EDZ44510.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 394

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 156/392 (39%), Positives = 231/392 (58%), Gaps = 17/392 (4%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  + + Q I  + L V F +  +N+  N++ + L++   FL E AG++I+Q ++ YT
Sbjct: 5   DTRYRSYTFQFIALIALIVAFGYLGSNLIANLKAAGLNISYRFLGEPAGYDINQRLIEYT 64

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+  A +VG +NT  +A      ATIIG +VG  RLS N +V  +  VYVE+FRN+P
Sbjct: 65  SQSSHMRAAVVGMLNTLLVAVVACFLATIIGVIVGVLRLSNNWIVNKLMGVYVEIFRNVP 124

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFP--TLTMDTNAKIFV 191
            L+ I  +    ++VLP P      D +  +   +F    RG  FP  T T    A    
Sbjct: 125 VLIWILIIMAVFVAVLPQPREFRGDDATASMFLDLFAFTGRGFYFPRPTFTAGWAAGSTG 184

Query: 192 FSFVLGIVLSLF--ATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +  ++G++++ F  A  L++      E+TG+  P  +  T  I+ +P LV   +   L +
Sbjct: 185 YLVIIGLLIASFFGARALAKSATVTQERTGER-PKTWYFTLAIWLVPVLVACVVM-GLTW 242

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P L  FNF GG      +++L  ALS YTAAFIAE VR+G++A+  GQ EAA +LGL 
Sbjct: 243 ELPALKGFNFKGGIYARNSYIALTFALSIYTAAFIAENVRAGILAISTGQTEAAASLGLR 302

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIE 365
             +   LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+ D+  ++GG  +NQTG+AIE
Sbjct: 303 PGRIMNLVILPQALRVIIPPLISQYLNITKNSSLAIAVGYMDVTGTLGGITLNQTGRAIE 362

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L+ M  YL +S+ I+  MN  N  + LKE+
Sbjct: 363 TVLLLMAFYLIISLSISAIMNVYNNSVKLKER 394


>gi|309791171|ref|ZP_07685703.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
 gi|308226733|gb|EFO80429.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
          Length = 398

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 158/393 (40%), Positives = 235/393 (59%), Gaps = 14/393 (3%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +R+ F  D R+  + +QII  L + V F+W + +N+   + +SNL     FLS+ AGF I
Sbjct: 11  ARIPFYRDTRIIAVLLQIIF-LFVVVGFIWFLYSNMMAGLRRSNLLPNYSFLSQPAGFPI 69

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +  +PY    +Y  A ++G +NT  ++  G++ ATI+G ++G  RLS+N L+  +   Y
Sbjct: 70  SESPIPYDPGRTYGYAFIIGVLNTLRVSVIGVVLATILGVIIGISRLSSNWLLRSVATGY 129

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT-MDTNAKIFV 191
           VE+ RNIP L+ +FF +  +    P    SI L   ++L+NRG+   TLT M   +    
Sbjct: 130 VELVRNIPLLLQLFF-WMIMSQAFPRIQDSINLGGLLYLHNRGV---TLTWMREGSSFGA 185

Query: 192 FSFVLGI-----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL--IALKYQL 244
           +   +GI     V+   A R+     ++ G ALP   +    +  +  ++L   +  + L
Sbjct: 186 WLIWIGIGGLAGVILYIARRIQFVRRDRPGVALPWALLLAAGVALVGFIILRISSGTWPL 245

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D P L +F+F GG T++  F +L + L  YTA +I EIVRSG+ AV +GQ EAA ALG
Sbjct: 246 ALDIPELQRFSFQGGITITTNFAALIMGLVIYTAVYIGEIVRSGIQAVNKGQREAARALG 305

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  RLV+ PQA+R +IPP+TSQYLNL KNSSLAVA+GF DL SV GT +NQTGQ +
Sbjct: 306 LTPGQTLRLVIFPQALRIMIPPMTSQYLNLTKNSSLAVAIGFPDLFSVAGTTLNQTGQTV 365

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++LI M  YLS+S++ +L MN  N +I L E+
Sbjct: 366 PVMLIVMLSYLSVSLVTSLLMNWYNKRIQLVER 398


>gi|86608411|ref|YP_477173.1| polar amino acid ABC transporter permease [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556953|gb|ABD01910.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 390

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 140/358 (39%), Positives = 213/358 (59%), Gaps = 15/358 (4%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
            N+  +M +  +SLG  FL   A F I +G++PY    SY  A+ VG VNT WL+   ++
Sbjct: 42  QNLLASMRRLGISLGFRFLGNSANFGITEGLIPYDPSESYLKALAVGAVNTLWLSAVSIV 101

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT +G ++G  RLS+N L   +  V  E+FRN+P L+++ F Y+ V+  LP   +S+ +
Sbjct: 102 LATAMGFVLGMARLSSNWLARQLATVITEIFRNVPVLLIVIFWYQGVILTLPGVRNSLSI 161

Query: 166 PFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKAL 219
              +F+N RG+  P L        A   V +   GI   L A R    SR  +      +
Sbjct: 162 GGLVFINQRGVKLPGLDPSGWLVPALAIVIAAGWGIRKLLLARRPELGSRQRNLWVAAGV 221

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            LL ++ +++F  P +           D PVL +FNF GG  +S EF ++ + L  YT  
Sbjct: 222 ALLAVACWVLFPEPPV---------RLDVPVLERFNFRGGIQLSAEFTAMMLGLVTYTGC 272

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE+VR   +AVPRGQ EAA A+GL+  +  RLV++PQA+R +IP L +QYL L+KNSS
Sbjct: 273 YIAEVVRGSFLAVPRGQWEAARAVGLSELQTFRLVIVPQALRIMIPSLNTQYLTLIKNSS 332

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LA+AVGF+DL ++  TIINQ+G+++E+  I M  YL+ +++++  MN LNA++ L E+
Sbjct: 333 LAIAVGFSDLFNISSTIINQSGRSVEMFAILMATYLTFNLVVSYGMNWLNARVKLVER 390


>gi|99080136|ref|YP_612290.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99036416|gb|ABF63028.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 422

 Score =  236 bits (602), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 148/410 (36%), Positives = 234/410 (57%), Gaps = 34/410 (8%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R  + ++Q++  +   ++    ++N   N+          FLSE AG++I+Q ++
Sbjct: 17  LIYDTRYRSATIQVVALIGFLILVGSIISNTAQNLADLGKEPSFRFLSEPAGYDINQRLL 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y +  S+  A L+G +NT  +A  G I ATI+G ++G  RLS+N LVA +  VYVE+FR
Sbjct: 77  DYDNQDSHMRASLMGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVARLMAVYVEMFR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIP---------------------DHSIVLPFGMFLNNRG- 175
           N+P L+ I F+   ++  LP P                     +  + +P  +F N+ G 
Sbjct: 137 NVPLLLWIVFIMAILIETLPAPRAFRGENPEATMSVFDSVAVTNRGVYVPEPLFHNSLGN 196

Query: 176 ---LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLI 229
                   +  D +  +     VLG   SL+ ++  R + ++T ++    P  +     +
Sbjct: 197 IGVFGDSAVRFDVSLDLIALLVVLGA--SLYVSKRIRLWADQTQESTGLRPTTWHMRSAV 254

Query: 230 FGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             LP+ L+L  L +  H   P L  FNF GG+ +    ++L++ALS YTAAFIAEIVRSG
Sbjct: 255 VVLPSALLLFVLGF--HLGYPALKGFNFAGGTHLRNSLIALWLALSLYTAAFIAEIVRSG 312

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++A+ +GQ EAA ALGL  ++   LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ D
Sbjct: 313 ILAISKGQTEAAAALGLRPKRIMNLVILPQALRVIIPPLISNYLNLTKNSSLAIAVGYMD 372

Query: 349 LV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L  ++ G  +NQTG+ +E +L+ M +YL++S++I+  MN  N ++ L E+
Sbjct: 373 LTGTLMGITMNQTGRELETVLLGMLVYLTISLLISSVMNWYNNRVKLVER 422


>gi|83950492|ref|ZP_00959225.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
 gi|83838391|gb|EAP77687.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
          Length = 407

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 156/411 (37%), Positives = 227/411 (55%), Gaps = 36/411 (8%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R  + ++Q +  L   +   W ++N   N++     +  GFL E A ++I+Q ++
Sbjct: 2   LIYDTRYRSFTIQAVALLGFMLFGAWLISNTITNLQTLGKPVQFGFLLEPAQYDINQRLL 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y +  ++  A  +G  NT  +AF G I ATI+G  VG  RLS N LVA I  VYVEVFR
Sbjct: 62  DYNNRDTHLRAAFIGLTNTLLVAFLGCIAATILGVFVGVLRLSKNWLVAKIMAVYVEVFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH--------SIVLPFGMFLNNRGLSFPT--------- 180
           N+P L+ I      ++  LP P          S+     + + NRG+  P          
Sbjct: 122 NVPVLLWIVLAMAVLIESLPSPKDFRGDNATASMSFFDSVAVTNRGVYIPEPLFSRSLGD 181

Query: 181 --------LTMDTNAKIFVFSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFL 228
                   L MD +  +   + VL I+ S+FA +     +      TG   P  +     
Sbjct: 182 VHLLGDSPLRMDLSLDLL--AIVLVIIASIFAIKKVNARATAIQNSTGLR-PTTWHVNLG 238

Query: 229 IFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           IF +P +VL IAL +  H   P L  FNF GG+ +     +L++ALS YTAAFIAEIVR+
Sbjct: 239 IFFVPLIVLLIALGF--HLGYPELKGFNFQGGTHLRNSLTALWLALSLYTAAFIAEIVRA 296

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++A+  GQ EAA ALGL  ++   LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ 
Sbjct: 297 GILAISHGQTEAAGALGLRPKRIMSLVVLPQALRVIIPPLISNYLNLTKNSSLAIAVGYM 356

Query: 348 DLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           D+  ++GG  +NQTG+ +E +L+ M  YL +S+ I+  MN  N+++ L E+
Sbjct: 357 DITGTLGGITMNQTGRELESVLMLMLAYLIISLSISAVMNWYNSRVKLVER 407


>gi|114766875|ref|ZP_01445797.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Pelagibaca bermudensis HTCC2601]
 gi|114540921|gb|EAU43981.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. HTCC2601]
          Length = 410

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/401 (38%), Positives = 235/401 (58%), Gaps = 18/401 (4%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F   + +YD R  ++++Q++  ++L ++F W V+N  +N++        GFL++ +G++I
Sbjct: 12  FRLSQLIYDTRYRSLTIQVVAMIVLMLLFSWLVSNTIHNLQTLGKDFDFGFLTQPSGYDI 71

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q ++ Y S S++  A +VG +NT  +A  G   AT++G + G  RLS N LV+ +  VY
Sbjct: 72  NQRLIEYDSQSTHGRAAIVGILNTLLVAVLGCALATVLGVIAGVLRLSNNWLVSRLMAVY 131

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP--------IPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           VE FRN+P L+ I  ++  +    P         PD S++    + + NRG+  P +   
Sbjct: 132 VEGFRNVPLLLWIVLIFALMTESTPAPRAFRGDTPDASMLFD-AVAITNRGVYVPAIHFA 190

Query: 185 ----TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG---LPTLVL 237
               TN  +     ++ +  S+FA +  RH+     +A      + +LI G   LPT +L
Sbjct: 191 SPFFTNGALNWLVVLVVLGASIFAIQRLRHWATAKQEATGDRPTTWYLILGILILPTGLL 250

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           + L      D P L  FNF GG  +    ++L++ALS YT AFIAEIVR G++AV +GQ 
Sbjct: 251 MLLMGAF-LDMPSLQGFNFGGGIHLRNSLIALWLALSLYTGAFIAEIVRGGILAVNKGQT 309

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTI 356
           EAA ALG+       LV+LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D+ S +GG  
Sbjct: 310 EAAYALGIRPSTTMNLVILPQALRVIIPPLISQFLNLTKNSSLAIAVGYMDVRSTLGGIT 369

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           INQTG+ +E +L+    YL LS++I+  MN  NA + LKE+
Sbjct: 370 INQTGRELEGMLLLGLFYLVLSLLISGVMNVYNASVKLKER 410


>gi|171058820|ref|YP_001791169.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170776265|gb|ACB34404.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 343

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/368 (38%), Positives = 205/368 (55%), Gaps = 55/368 (14%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q+++  L+ V+  W V+N   NM    +  G  FL++ AGF+I + ++ + S   Y  A 
Sbjct: 31  QLLMLALVAVVVGWLVHNTLANMALRGIRSGWDFLTQTAGFDIGESLIAFESIDPYWRAF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG +NT  +A  G++  T++GT +G GR S N LV  +C  YVE+FRN+P LV +   Y
Sbjct: 91  LVGLLNTLRVALIGIVLITLLGTALGVGRYSRNALVRGLCYGYVELFRNVPILVQLLIWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L V  +P+    L +G                                        R
Sbjct: 151 --LLMVEFLPEAMAPLDWG---------------------------------------GR 169

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F  K+G +LP L  S               +    +  P  G F   GG T+SPEF+S+
Sbjct: 170 VFLSKSGLSLPWLAHSA--------------EAGWSWSIPEPGAFVLEGGVTLSPEFLSV 215

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L+ YT++F+AE+VR+G+ +VPRGQ EAA ++GL+  K  RLV+LPQA+R IIPPLT+
Sbjct: 216 LLGLTFYTSSFVAEVVRAGIASVPRGQTEAAHSIGLSRAKTLRLVVLPQALRVIIPPLTN 275

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           QYLNL KNSSLAV +G+ D+VS+  T +NQTG+A+E I I M +YLS S+  A  MN  N
Sbjct: 276 QYLNLTKNSSLAVVIGYPDVVSIANTALNQTGRAVECIAIIMAVYLSTSLGTAALMNAYN 335

Query: 390 AKIALKEK 397
            ++A++E+
Sbjct: 336 RRVAIRER 343


>gi|126737043|ref|ZP_01752778.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. SK209-2-6]
 gi|126721628|gb|EBA18331.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. SK209-2-6]
          Length = 395

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/394 (40%), Positives = 234/394 (59%), Gaps = 20/394 (5%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q I AL+L +   +  NN+  N+  + L++   FL + +G++I+Q +V Y 
Sbjct: 5   DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYSFLGDPSGYDINQRLVEYD 64

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+A A +VG +NT  +AF   I ATI G + G  RLS N L++ I  VYVEVFRNIP
Sbjct: 65  SQSSHARAAIVGILNTVLVAFLACITATIFGVIAGVLRLSNNWLISKIMAVYVEVFRNIP 124

Query: 141 PLVVIFFLYKSVLSVLPIPDH--------SIVLPFGMFLNNRGLSFPTLTMDTN---AKI 189
            L+ I  ++  + +V+P P          S+VL    F  NRG+  P    +T    +  
Sbjct: 125 VLIWIIIIFTIMTAVMPGPREFRGAEPTASMVLDLFAF-TNRGVYIPMPWFETGLFASAG 183

Query: 190 FVFSFVLGIVL-SLFATRL----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             +  VL ++  S F  R     +    E+TG     L+I    ++ LP +VL+     L
Sbjct: 184 MNWVLVLAVLAGSFFVMRKVEQNATKKQEETGIRPNTLFIG-LAVWILP-IVLLLFVMGL 241

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALG
Sbjct: 242 TWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAAALG 301

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQA 363
           L   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+  ++GG  +NQTG+A
Sbjct: 302 LRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGRA 361

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE +L+ M  YL+ S++I++ MN  NA + LKE+
Sbjct: 362 IECVLLLMLFYLTASLLISMAMNVYNASVKLKER 395


>gi|83592119|ref|YP_425871.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83575033|gb|ABC21584.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 387

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/374 (41%), Positives = 221/374 (59%), Gaps = 20/374 (5%)

Query: 33  LALLLTVIFLWCV--NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           LA+LL V  L+ V   N  +N+ +  +++G G+L   A FEI + +V YTS  SYA A+ 
Sbjct: 24  LAVLLGVFALFSVLGANTVDNLGRLGITVGFGYLDHPANFEIGESLVAYTSGDSYARALG 83

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG +NT  ++  G + AT++G  +G GRLSAN L++   ++YVEV RN P L+ +FF + 
Sbjct: 84  VGILNTALVSIIGCLLATLLGVALGIGRLSANLLISRAVQLYVEVIRNTPLLLQLFF-WS 142

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG-------IVLSLF 203
           + +  LP P  +     G+FL NRGL  P L MD  A   VFS +L        +V  L 
Sbjct: 143 ATIHALPGPRQAFEPLTGVFLTNRGLYMPALAMDGAA---VFSLLLLGGGALAGVVRILV 199

Query: 204 ATRLSRHF-HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
             R  RH   E+  K   L  ++  L+  L   +  A+      + P LG FN  GG  +
Sbjct: 200 HER--RHGPMERAAKTALLGAVAVLLLGVLALCLGGAVS----VEPPRLGGFNITGGWVL 253

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SPEF++L + L    +A I EIVRSG+ AVP GQ EAA +LGLT  +  RLV+LPQA+R 
Sbjct: 254 SPEFLALLVGLVINASAVICEIVRSGIEAVPEGQWEAARSLGLTRGRTLRLVVLPQALRV 313

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IP +TS YL+L KNSSLAVA+GF DLVSV  T  NQTG   E I + M +YL++S+ ++
Sbjct: 314 VIPLMTSSYLSLTKNSSLAVAIGFPDLVSVVNTSANQTGHVFEAIALMMAVYLTISLTVS 373

Query: 383 LFMNRLNAKIALKE 396
             +N  N +++L  
Sbjct: 374 AALNFYNHRLSLGR 387


>gi|172037185|ref|YP_001803686.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine
           [Cyanothece sp. ATCC 51142]
 gi|171698639|gb|ACB51620.1| amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           [Cyanothece sp. ATCC 51142]
          Length = 395

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/390 (38%), Positives = 227/390 (58%), Gaps = 12/390 (3%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE---RAGFE 71
           ++ F  D R+  + +Q++   ++ ++F+   NN+  N  +  L+ G GF+ +    + F 
Sbjct: 11  KIPFWRDSRIIKVIIQLLTISIIILVFILLGNNLSQNFRQLGLTFGFGFIFDPDLNSRFN 70

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I    +PY     Y  AILVG +N+  +  +G+I A ++G ++G GRLS N LV  I  +
Sbjct: 71  IGDSPIPYQPTDPYYRAILVGLLNSLRVMITGIILAFLLGVIIGLGRLSDNWLVQKIATI 130

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           YVE  RN P L+ +FF Y +V    P  D  +VL   +FL+N+G+  P L  +    + +
Sbjct: 131 YVETIRNTPLLLQLFFWYFAVFLKFPKIDAPLVLFNSIFLSNQGVYLPFLLRNLQTFLAI 190

Query: 192 FSFVLGIVLSLFATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFD 247
              +LG + +    R           TGK   +  I+  ++  L  +V   L +Q  ++D
Sbjct: 191 LILLLGGITAFLIWRKKTKVIIQQGTTGKVYNIGLITILILSFL--IVFFGLDWQFPNYD 248

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             V    N   G  +SPEF +L   L+ YTAAFIAE+VRSG+ +V +GQ EAA ALGL  
Sbjct: 249 SQVQRIQN---GLNLSPEFATLLTGLTIYTAAFIAEVVRSGIQSVSKGQWEAAKALGLNS 305

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
             A RLV+ PQA+R +IPPLTS++LNL KNSSLAVA+G+ D+ +V  TI NQTG++IE++
Sbjct: 306 GLAMRLVIFPQALRVMIPPLTSEFLNLAKNSSLAVAIGYNDIYAVSNTISNQTGKSIEML 365

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LI M  YL  +++I+  MNRLN  + LKEK
Sbjct: 366 LIVMVTYLIFNLIISSGMNRLNRFVQLKEK 395


>gi|126736639|ref|ZP_01752379.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter sp. CCS2]
 gi|126713952|gb|EBA10823.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter sp. CCS2]
          Length = 405

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 148/389 (38%), Positives = 222/389 (57%), Gaps = 11/389 (2%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D R  + + Q I  +LL     +   N+  N+    L++   FL + AG++I+Q  + 
Sbjct: 18  LNDTRYRSYTFQFIALVLLIAFMAYLGINLVRNLAAQGLNISFSFLGDPAGYDINQRPIE 77

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y S S++  A +VG +NT  +AF   + ATI G   G  RLS+N +V  +   YVE+FRN
Sbjct: 78  YDSQSTHLRAAVVGILNTLIVAFLACVTATIFGVTAGVLRLSSNWVVRKLMSFYVEIFRN 137

Query: 139 IPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFV 191
           IP L+ I  ++  +   +P P      + +  + F  F   NRG+  P   +D  A   V
Sbjct: 138 IPVLIWIIIIFSIMTVAMPAPRAFRGDNATSSMLFESFAFTNRGVYSPAPVIDGAAGWIV 197

Query: 192 FSFVLGIVLSLFATR--LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
               +  ++ +FA R   ++  ++ TG+ LP  + S  + F    LV   L   +  D P
Sbjct: 198 VGVFIASIIGIFAYRKFATKKLYD-TGQLLPTFWPSVAMFFVPTILVYFILGRPITLDYP 256

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG  +    ++L+ AL+ YT AFIAE VR+G+ A+ +GQ EAA +LGL   +
Sbjct: 257 SLQGFNFQGGLHLRGSLIALWFALAIYTGAFIAENVRAGIQAISKGQTEAAASLGLRPGR 316

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIIL 368
              LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+ D+ S +GG  +NQTG+AIE IL
Sbjct: 317 IMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYMDVTSTLGGITLNQTGRAIEAIL 376

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M  YL++S++I+  MN  N  + L+E+
Sbjct: 377 LLMLFYLTISLLISGVMNVYNNSVKLQER 405


>gi|260427206|ref|ZP_05781185.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Citreicella sp. SE45]
 gi|260421698|gb|EEX14949.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Citreicella sp. SE45]
          Length = 410

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/403 (38%), Positives = 235/403 (58%), Gaps = 22/403 (5%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F   + +YD R  ++++Q++  +LL ++F W V+N  +N++        GFL + +G++I
Sbjct: 12  FRLSQLIYDTRYRSLTIQVVAMILLMLLFSWLVSNTIHNLQNLGKDFDFGFLWQPSGYDI 71

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q ++ Y S S++  A LVG +NT  +A  G   AT++G + G  RLS N LVA +   Y
Sbjct: 72  NQRLIDYNSQSTHGRAALVGILNTLLVAALGCALATVLGVIAGVLRLSNNWLVARLMAFY 131

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPD-------HSIVLPFGMFLNNRGLSFPTLTMDT 185
           VE FRN+P L+ I  ++  +    P P         + +L   + + NRG+  P +    
Sbjct: 132 VEGFRNVPLLLWIVLIFALMTEGTPAPSAFRGDTPSASMLFDAVAITNRGVYIPAIHF-- 189

Query: 186 NAKIF---VFSFVLGIVL---SLFATRLSRHF----HEKTGKALPLLYISTFLIFGLPTL 235
           NA  F   +++++L I +   S+F  +   H+     E TG   P  +  T  +  +PT 
Sbjct: 190 NAAFFESGLYNWLLIIAVFAASVFVVKRIGHWAAVKQEATGDR-PTTWYLTLGVLIVPTA 248

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L+ L    +FD P L  FNF GG  +    ++L++ALS YT AFIAEIVR G++A+ +G
Sbjct: 249 ILMVLM-GAYFDLPSLQGFNFGGGVHLRGSLIALWLALSLYTGAFIAEIVRGGILAISKG 307

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGG 354
           Q EAA ALGL       LV+LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D  S +GG
Sbjct: 308 QSEAAFALGLRPGTTMNLVILPQALRVIIPPLISQFLNLTKNSSLAIAVGYMDARSTLGG 367

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             INQTG+ +E +L+    YL LS++I+  MN  N  + LKE+
Sbjct: 368 ITINQTGRELEGMLLLGLFYLVLSLLISGVMNVYNNSVKLKER 410


>gi|218437711|ref|YP_002376040.1| polar amino acid ABC transporter inner membrane protein [Cyanothece
           sp. PCC 7424]
 gi|218170439|gb|ACK69172.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7424]
          Length = 390

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 148/393 (37%), Positives = 228/393 (58%), Gaps = 16/393 (4%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER---AGF 70
            ++ F  D R+ N+  QI + L+L  I ++  NN+  N ++  L+ G  F+ +    AGF
Sbjct: 5   EKIPFWRDTRILNLLGQIFVILVLVGILIFLGNNLIINFQRLRLNFGFEFIFDTRRPAGF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    +PY        A+LVG +N+  +  SG+I A I+G +VG GRLS+N LV  I  
Sbjct: 65  NIGNSPIPYQPTDPVIIALLVGLINSLRVMISGIILAAILGIMVGLGRLSSNWLVRQIAT 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVE+FRN P L+ +FF Y +V    P  D+ ++L   + L+NRG++ P  +      + 
Sbjct: 125 VYVEIFRNTPLLLQLFFWYSAVFLKFPKIDNPLILFNSILLSNRGMAIPWPSGKLQTWLS 184

Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +    +  +L+  ++ TR  R   +       L+ +S     G+    L+AL   L + K
Sbjct: 185 LILLFINAILAFLVWRTRTQRRIQQGESGNRFLVILS-----GIGITSLLALMIGLDWQK 239

Query: 249 PVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           P+L    G+     G  +SPEF SL I L+ YTAAFIAE+VR+G+ +V +GQ EAA ALG
Sbjct: 240 PLLNIELGRIE--QGLILSPEFASLLIGLTVYTAAFIAEVVRAGIQSVNQGQWEAAKALG 297

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L      +LV+ PQA+R +IPPLTS++LNL KNSSLA A  + D+ +V  T+  +TG+A+
Sbjct: 298 LKPSLVMQLVIFPQALRVMIPPLTSEFLNLAKNSSLASATLYKDIFAVSYTVAEKTGRAV 357

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E++L+ M  YL ++++I+  MN  N  + LKE+
Sbjct: 358 EMMLVVMSTYLIINLIISSGMNTFNHLVQLKER 390


>gi|110347224|ref|YP_666042.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283335|gb|ABG61395.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chelativorans sp. BNC1]
          Length = 380

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/349 (37%), Positives = 212/349 (60%), Gaps = 2/349 (0%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109
            N+E   + LG GFL   A F+I + I+PY+S      A +VG  N+ +++   ++ A++
Sbjct: 33  RNLELRGIPLGFGFLWRPANFQIAETILPYSSSDPNWWAAVVGLSNSLFISVLVILLASV 92

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           IG  +G GRLS+N LV+ +CRV+VEV RN P +V++ F Y     V+P+   +  L  G 
Sbjct: 93  IGLFIGIGRLSSNPLVSGLCRVWVEVARNTPLVVLLIFNYALWWEVVPLATQAWKLAPGT 152

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            ++ RGLS P LT   +             + + A+  +R    +TG+  P    + +L 
Sbjct: 153 HISVRGLSMPALTWSASVLAPAAFLATSAAILVVASYAARQRQVETGRR-PAYVSAAWLF 211

Query: 230 FGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             L  ++ L+A +  +  D P   + NF GG +++PE  ++ I L+ YTA FI EIVR G
Sbjct: 212 TALGASIFLLAYRDAVSLDIPEFRRANFSGGWSLTPELTTILIGLTFYTAGFIGEIVRGG 271

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALGL+  +  RLV++P A+RSI+PPL SQY+N++KNS+LA+ VG+ D
Sbjct: 272 ILAVRKGQWEAATALGLSRGQTYRLVVVPLALRSIVPPLNSQYINVVKNSTLAIVVGYQD 331

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++V  T+IN+T  AIE + I + ++L++++ ++  +N  N +IA+ E+
Sbjct: 332 FMTVVSTMINKTSHAIEGVAIILGVFLAVNLALSALLNAYNRRIAIMER 380


>gi|113475660|ref|YP_721721.1| polar amino acid ABC transporter inner membrane subunit
           [Trichodesmium erythraeum IMS101]
 gi|110166708|gb|ABG51248.1| polar amino acid ABC transporter, inner membrane subunit
           [Trichodesmium erythraeum IMS101]
          Length = 388

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/386 (36%), Positives = 217/386 (56%), Gaps = 6/386 (1%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            ++    D R   +++Q++  ++  V+    ++N+  N+ +     G  FL   A F I 
Sbjct: 7   QKIPLWRDDRFWRVALQVLAIIIFVVVVFIMISNLSRNLAQQGTRFGFSFLDNEAAFSIS 66

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++PY +   Y   +L G  N+  +   G+   TI+G + G    S N L+  + RVYV
Sbjct: 67  ESLIPYEASDPYIQVLLAGLFNSLRVMILGIFLTTILGIVAGIASFSENWLLRNLNRVYV 126

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV RN P L+ +FF Y +V   LP+P   + LP  +F++ RG++ P      N  +++  
Sbjct: 127 EVVRNTPLLLQLFFWYFAVFFNLPLPQEKLELPGPIFMSKRGIAIPWPENTVNVWLWLIV 186

Query: 194 FVLGIVLSLFATRL-SRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
             LG + ++F  +  ++   EK     P L+ I T  I  L  +++ AL +Q        
Sbjct: 187 LFLGAIAAIFIWQWRNKLMTEKAASGQPQLIAIITIGIMEL-LIIIFALGWQAPIATETG 245

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G     GG  ++ E  +L + L  YT AFIAEIVRSG+ AVP+GQ EAA +LGL      
Sbjct: 246 GT---KGGLNLTLEISALLVGLVFYTGAFIAEIVRSGIQAVPKGQWEAAKSLGLKPGLVM 302

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           RLV+ PQA+R +IP L SQY+NL KNSSLA+A+G+ DL +V  T  NQTG+ IE+ ++ M
Sbjct: 303 RLVIFPQALRVMIPSLNSQYMNLAKNSSLAIAIGYPDLYAVANTTYNQTGRPIEVFILIM 362

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            +YLS++++I+L MN LN  + LKE+
Sbjct: 363 VVYLSINLIISLSMNFLNKSVQLKER 388


>gi|307152420|ref|YP_003887804.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7822]
 gi|306982648|gb|ADN14529.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7822]
          Length = 390

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/391 (38%), Positives = 231/391 (59%), Gaps = 12/391 (3%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL--SER-AGF 70
            +  F  D R  ++  Q ++ L++  I  +  NN+ NN ++ +L  G  F+  S R AGF
Sbjct: 5   EKTPFWRDTRFLSLLGQTLVVLVVLAIGFFLANNLVNNFQRLHLRFGFDFIFDSRRPAGF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    +PY        A+LVG +N+  +   G+I A+I+G ++G  RLS+N LV +I  
Sbjct: 65  SIGNAPIPYKPTDPIIVALLVGLINSLKVLVFGIILASILGVILGISRLSSNWLVRYIAT 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVE+FRN P L+ +FF Y +V    P  ++ ++L  G+FL+NRGL+ P  + +  + +F
Sbjct: 125 VYVEIFRNTPLLLQLFFWYTAVFLKFPKINNPLILFEGIFLSNRGLAIPWPSGNFLSWLF 184

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI--STFLIFGLPTLVLIALKYQLHFDK 248
               +L +V S+           + GK   +  +  S  +I  L  L +I L +Q    K
Sbjct: 185 AGFLLLSVVSSVKLWHWHTQLRVQQGKTRSIFVVIFSAIIIASLWAL-MIGLDWQ----K 239

Query: 249 PVL-GQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           P L  +   I  G T+SPEF S+ + L+ YTAAFIAE+VR+G+ +V +GQ EAA+ALGL 
Sbjct: 240 PQLNAKLGLIEHGLTLSPEFASILMGLTFYTAAFIAEVVRAGIQSVDKGQREAALALGLK 299

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                +LV+ PQA+R IIPPLTS++LNL KNSSLA A  + D+ +V  T+  ++G+A+E+
Sbjct: 300 PSLVMQLVIFPQALRVIIPPLTSEFLNLAKNSSLASATLYKDIYAVSYTVAEKSGRAVEM 359

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IL+ M  YL ++++I+  MN  N  + LKE+
Sbjct: 360 ILVVMGTYLIINLVISSSMNTFNRWVQLKER 390


>gi|89053119|ref|YP_508570.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88862668|gb|ABD53545.1| L-aspartate ABC transporter membrane protein / L-asparagine ABC
           transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Jannaschia sp. CCS1]
          Length = 429

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/421 (36%), Positives = 233/421 (55%), Gaps = 39/421 (9%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVN-NVYNNMEKSNLSLGIGFLSERAGFE 71
           F   + +YD R  ++++Q++ A +L ++ LW +  N   N+         GFL  RAG++
Sbjct: 12  FRLSQLIYDTRYRSMTIQVV-AFILIMLGLWYLGRNAIQNLSDLGKDFDFGFLGNRAGYD 70

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I+Q ++ Y++DS++  A +VG +NT  +AF G I ATI+G   G  RLS N +V  +  V
Sbjct: 71  INQRLIEYSNDSTHGRAAIVGILNTLLVAFLGCITATILGVAAGVLRLSNNWIVGRLMTV 130

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIP--------DHSIVLPFGMFLNNRGLSFP---- 179
           YVE FRNIP L+ I  ++  +   +P P        + S+ L   + + NRG+  P    
Sbjct: 131 YVEGFRNIPLLLWIIVIFAIMTEAMPQPRDFRGDNPEASMSLGGSVAVTNRGVYIPNVVF 190

Query: 180 TLTMDTNA---------------------KIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           T ++  N                       +F+   + G++ S    R ++   E TG  
Sbjct: 191 TRSLGGNEMSDAADGVPAAIIPAASFGDWALFLAVLIAGVLGSGAIARWAKAKQEATGVR 250

Query: 219 LP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            P L ++    I     +VLIAL   L  D P L  FNF GG  +    ++L+ ALS YT
Sbjct: 251 PPGLFWMRAAAIVVPAAIVLIALGATL--DYPELRGFNFSGGIHLRNALIALWFALSLYT 308

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AFIAEIVR+G+++V +GQ EA+ ALG+       LV+LPQA+R IIPPL SQ+LNL KN
Sbjct: 309 GAFIAEIVRAGILSVSKGQTEASSALGMRASWTMNLVVLPQALRVIIPPLISQFLNLTKN 368

Query: 338 SSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SSLA+AVG+ D+ S +GG  INQTG+ +E +L+    YL  S++I+  MN  N  + L+E
Sbjct: 369 SSLALAVGYMDVRSTLGGITINQTGRELEGMLLLGAFYLITSLLISAVMNVYNNSVKLQE 428

Query: 397 K 397
           +
Sbjct: 429 R 429


>gi|328950981|ref|YP_004368316.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
 gi|328451305|gb|AEB12206.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
          Length = 392

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 153/395 (38%), Positives = 219/395 (55%), Gaps = 28/395 (7%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           + F  D RV N+ VQ++ AL    +  + +   Y  M    +     FL + AGF I +G
Sbjct: 6   IPFWRDARVLNLVVQVLAALFALGLIAFLLFTAYRGMVARGIPFTFSFLGQEAGFTISEG 65

Query: 76  IV-----------PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            V           P+    +Y  A   G  NT  +A  G++  TI+G LVG GRLS+N L
Sbjct: 66  PVLALEDGRLVLRPFKPSDAYWQAFFAGIYNTLRVALVGIVLTTILGVLVGIGRLSSNWL 125

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY-KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           V  +   YVE+ RN P LV +FF Y  ++L   P+   S     G+  + RG+  P   +
Sbjct: 126 VNRLAFAYVELVRNTPLLVQMFFWYFGAILKFPPVRQASEWFG-GLIASQRGIFLP-WPV 183

Query: 184 DTNA----KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            T+A    + F++  +L  V    A R           AL L +   +L+ G P      
Sbjct: 184 PTDAWPRFEPFLWGGLLLAVGVYLALRRQGWARWSALGALVLAWGVGWLVSGGP------ 237

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               L   +P LG+F   GG T+SPEF ++ +AL  YTA++IAEIVR  + ++P+GQ EA
Sbjct: 238 ----LAISEPELGRFRVTGGLTLSPEFSAVLLALVIYTASYIAEIVRGAIQSLPKGQWEA 293

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGLT+ +  RLV+LPQAMR IIPPL +QYLNL KNSSLA+AVG+ +L +V GTI NQ
Sbjct: 294 ATSLGLTYAQTMRLVILPQAMRIIIPPLGNQYLNLTKNSSLAIAVGYPELFNVYGTIANQ 353

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G+++E ILI M  YLS+S+ I+  +N  N ++ L
Sbjct: 354 SGRSLEGILIVMAAYLSMSLTISALVNWYNRRVTL 388


>gi|163740275|ref|ZP_02147669.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis 2.10]
 gi|161386133|gb|EDQ10508.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis 2.10]
          Length = 395

 Score =  229 bits (584), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/395 (38%), Positives = 231/395 (58%), Gaps = 22/395 (5%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q I AL+L +   +  NN+  N+  + L++  GFL + +G++I+Q ++ Y 
Sbjct: 5   DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYGFLGDPSGYDINQRLIEYD 64

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+A A +VG +NT  +A    I ATI G + G  RLS N LV+ +  VYVE+FRNIP
Sbjct: 65  SQSSHARAAVVGVLNTLLVAVLACITATIFGVVAGVLRLSNNWLVSKLMAVYVEIFRNIP 124

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDT----NAKI 189
            L+ I  ++  + +V+P P      + +  + F +F   NRG+  P    ++    +  +
Sbjct: 125 VLIWIIIIFTIMTAVMPGPREFRGDNATSSMLFDLFAFTNRGVYIPMPWFESGFFASGAL 184

Query: 190 FVFSFVLGIVLSLFATRL----SRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQ 243
                +  +V S    R     +    EKTG      L+ +  +L+     L L+     
Sbjct: 185 NWLVVIAALVGSFLVMRRIEANATKTQEKTGVRPKTKLIALGVWLV----PLALVLFVMG 240

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA AL
Sbjct: 241 LSWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINKGQTEAAAAL 300

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ 362
           GL   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+  ++GG  +NQTG+
Sbjct: 301 GLRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGR 360

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE +L+ M  YL+ S++I++ MN  NA + LKE+
Sbjct: 361 AIECVLLLMLFYLTASLLISMVMNVYNASVKLKER 395


>gi|163739482|ref|ZP_02146892.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Phaeobacter gallaeciensis BS107]
 gi|161387235|gb|EDQ11594.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Phaeobacter gallaeciensis BS107]
          Length = 410

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 151/395 (38%), Positives = 231/395 (58%), Gaps = 22/395 (5%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q I AL+L +   +  NN+  N+  + L++  GFL + +G++I+Q ++ Y 
Sbjct: 20  DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYGFLGDPSGYDINQRLIEYD 79

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+A A +VG +NT  +A    I ATI G + G  RLS N LV+ +  VYVE+FRNIP
Sbjct: 80  SQSSHARAAVVGVLNTLLVAVLACITATIFGVVAGVLRLSNNWLVSKLMAVYVEIFRNIP 139

Query: 141 PLVVIFFLYKSVLSVLPIP------DHSIVLPFGMF-LNNRGLSFPTLTMDT----NAKI 189
            L+ I  ++  + +V+P P      + +  + F +F   NRG+  P    ++    +  +
Sbjct: 140 VLIWIIIIFTIMTAVMPGPREFRGDNATSSMLFDLFAFTNRGVYIPMPWFESGFFASGAL 199

Query: 190 FVFSFVLGIVLSLFATRL----SRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQ 243
                +  +V S    R     +    EKTG      L+ +  +L+     L L+     
Sbjct: 200 NWLVVIAALVGSFLVMRRIEANATKTQEKTGVRPKTKLIALGVWLV----PLALVLFVMG 255

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA AL
Sbjct: 256 LSWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINKGQTEAAAAL 315

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ 362
           GL   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+  ++GG  +NQTG+
Sbjct: 316 GLRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGR 375

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE +L+ M  YL+ S++I++ MN  NA + LKE+
Sbjct: 376 AIECVLLLMLFYLTASLLISMVMNVYNASVKLKER 410


>gi|260577145|ref|ZP_05845122.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259020619|gb|EEW23938.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 425

 Score =  229 bits (583), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 158/412 (38%), Positives = 237/412 (57%), Gaps = 35/412 (8%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R   I++Q+I+ +L+ +   W V+N   N+   +  +  GFL  RAG++IDQ ++
Sbjct: 17  LIYDTRYRAITIQVIVLILVLLCVSWLVHNTMVNLAAKDKDINFGFLWNRAGYDIDQQLI 76

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PYT+DSS+  A +VG +NT  +A    + AT+IG  VG  RLS N LV  +  VY+EVFR
Sbjct: 77  PYTNDSSHGRAAVVGLLNTLVVAGLACVLATVIGVFVGILRLSKNWLVGRLMTVYIEVFR 136

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH----------------SIVLPFGMFLNNRG------ 175
           N+P L+ IF     +   +P P                  +++    + L NRG      
Sbjct: 137 NVPVLLWIFVAATILSETMPEPKDFKVTDAMIAAGQAPKAAMLFDGAVALTNRGTNIPAP 196

Query: 176 -LSFPTLTMDTNAKIFVFSF------VLGIVL-SLFATRLSRHFHEKTGKALPLLYISTF 227
            LS P  ++D       FSF      ++G VL      R +R   E TG   P  +  + 
Sbjct: 197 LLSRPLGSLDLGLITLNFSFLAMLAVIIGSVLVHRLLLRRARAVQEATG-VRPATWWKSL 255

Query: 228 LIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++  +P + L+ AL +  H D PV   FNF GG  ++  F +L +ALS Y+A +IAE VR
Sbjct: 256 IVLVVPFVALLFALGF--HLDYPVFKGFNFKGGINLAHSFTALLLALSLYSATYIAENVR 313

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++AV  GQ EAA ALGL   + TRL++LPQA+R I+PPL SQYL++ KN+SL +AV +
Sbjct: 314 AGVMAVSHGQTEAAFALGLRPSRTTRLIILPQALRVIVPPLISQYLSITKNTSLGIAVSY 373

Query: 347 ADLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL  ++GG  +NQTG+ +E +L+ M IYL +S++I+  MN  N+ + LKE+
Sbjct: 374 LDLRGTLGGITLNQTGRELECMLLMMLIYLIISLIISAVMNVYNSSVKLKER 425


>gi|114771236|ref|ZP_01448656.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [alpha proteobacterium HTCC2255]
 gi|114548161|gb|EAU51048.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [alpha proteobacterium HTCC2255]
          Length = 420

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 149/411 (36%), Positives = 229/411 (55%), Gaps = 28/411 (6%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F   + LYD R  ++++QI+  + + + F W ++N   N+      +   FL E + ++I
Sbjct: 12  FKFSQLLYDTRYRSMTIQIVSLIAILLFFGWLISNTAANLATLGKPIQFKFLGEPSNYDI 71

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q ++ YTS  ++  A L+G +NT  LA  G + ATI+G  +G  RLS N LVA +  +Y
Sbjct: 72  NQRLLDYTSRDTHLRAGLMGLINTLVLALMGCVTATILGVAIGVLRLSKNWLVARVMTLY 131

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDH------SIVLPFGMFLNNRGLSFPTLTMDTN 186
           +E+FRNIP L+ I  ++  ++  +P P+       ++ L   + + NRG+  P    +  
Sbjct: 132 IELFRNIPVLLWIIIVFSIMIETMPRPNQFRSGEAAMKLFDSVAITNRGVYIPEPLFNGG 191

Query: 187 -AKIFVF---SFVLGIVLSLFAT--------------RLSRHFHEKTGKALPLLYISTFL 228
              IF+    S   G+ L L A               + +  F +      P  +     
Sbjct: 192 LGDIFLLGESSLRFGLSLDLIAILIVLFVGLFISKKIKTNADFIQNETGVRPTTWWKRLS 251

Query: 229 IFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           I  LP ++ L AL +  H   P L  FNF GG  +    ++L+IALS YTAAFIAE VRS
Sbjct: 252 IVILPIVITLWALGF--HLGYPELKGFNFKGGIYLRNSLIALWIALSLYTAAFIAENVRS 309

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV +GQ EAA ALG++  +   L++LPQA+R IIPP+ SQ+LNL KNSSLA+AVG+ 
Sbjct: 310 GIQAVAKGQSEAAYALGISPGRTMSLIILPQALRIIIPPVISQFLNLTKNSSLAIAVGYM 369

Query: 348 DLV-SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           DL  ++ G  +NQTG+ +E +L+ M IYL +S+ I+  MN  N  + L E+
Sbjct: 370 DLTGTLMGITLNQTGRELETVLMGMAIYLIISLAISTVMNWYNNSVKLVER 420


>gi|152994192|ref|YP_001339027.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835116|gb|ABR69092.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 410

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/378 (38%), Positives = 217/378 (57%), Gaps = 24/378 (6%)

Query: 33  LALLLTVIFLWCV-NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           + L+L +  LW +  N   N+ +  ++ G  FL   AGF I   ++PY    SY    LV
Sbjct: 44  IVLVLVLFGLWFLFANASENLNRLGMTFGFDFLQVTAGFNISWSLIPYDPGMSYWRVFLV 103

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G VNT  L+F  ++  T+IGT+VG  RLS N LV+ + R YVEV RN+P L+ I F +  
Sbjct: 104 GIVNTLILSFCVIVVGTLIGTVVGILRLSDNPLVSQLARWYVEVVRNVPLLIQIIFWFTV 163

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----R 206
           V S LP P  S  L   +FLNNRGL    +TM++      + +++ + ++L A      R
Sbjct: 164 VFSTLPAPRQSYHLGEWLFLNNRGLY--VMTMESTLS---WGWIVALGVALIAALYGLFR 218

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF------DKPVLGQFNFIGGS 260
            S+ ++  +G      YI      GL    L+A      F        P L  FNF GG+
Sbjct: 219 WSKPYYTLSGSRSTGFYI------GLAVWALVACWAIWTFLNSTSLSVPTLQGFNFSGGA 272

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F + ++A++ Y +A IAE VR+G+ ++ RGQ EAA  +G +  ++ RL+L+PQA+
Sbjct: 273 FLPASFGAAFVAMTVYRSAAIAETVRAGMQSIDRGQHEAAFTIGFSRVQSLRLILIPQAI 332

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           RSIIPP+T+ +L   K+SSLAVA+GF +LVSV   T +NQTG+AIEII + M  Y+ +S+
Sbjct: 333 RSIIPPMTNSWLAATKDSSLAVAIGFPELVSVFMQTSMNQTGRAIEIIFMVMGFYIFISL 392

Query: 380 MIALFMNRLNAKIALKEK 397
           +I+  +N+ N  +  K +
Sbjct: 393 LISYLLNKYNDSVQYKVR 410


>gi|297567746|ref|YP_003686717.1| hypothetical protein Mesil_3398 [Meiothermus silvanus DSM 9946]
 gi|296852195|gb|ADH65209.1| hypothetical protein Mesil_3398 [Meiothermus silvanus DSM 9946]
          Length = 378

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/388 (37%), Positives = 220/388 (56%), Gaps = 21/388 (5%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           M+ L D++V  + +Q +       + L+ +      M+   +    GFL + AGF + +G
Sbjct: 1   MRVLRDLKVIELLLQTLALGFTLAVLLFLIGTARARMQAQGIPFSFGFLQQEAGFSLSEG 60

Query: 76  IV--------PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           I         PY    +Y  A L GF+NT  +   G++ AT++G +VG  RLS++ L   
Sbjct: 61  ITWVPGEGLRPYGPTDTYTQAFLAGFLNTLRVVVGGLVLATLLGFVVGIARLSSHPLARG 120

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +   YVE+ RN P L+ +F  Y +VL  LP  + ++ L FG  L+ +GL  P   + +  
Sbjct: 121 LALAYVELVRNTPLLLQLFVWYFAVLLKLPPVEQALRL-FGAVLSKQGLFLPWPRLSSVW 179

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
             F   F  G++L      L R ++     A+ L++ +  ++ GLP +V          +
Sbjct: 180 GEFQAFFWGGVLLLAVGLALRRGWYGMV--AMALVWGAGVVLGGLPLVV----------E 227

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PV   F   GG  +SPEF +L   L  YTA+FIAEIVR  ++AVPRGQ EAA ALGL+ 
Sbjct: 228 FPVRTSFGLRGGLELSPEFAALLFGLVVYTASFIAEIVRGAVLAVPRGQWEAARALGLSA 287

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQA+R ++PPL +QYLNL KNSSLAVAVGF DL SV  TI NQ+G+++E I
Sbjct: 288 PQVLRWIILPQAIRIVLPPLANQYLNLTKNSSLAVAVGFPDLFSVYNTIANQSGRSLEGI 347

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +I M +YL +S+ I+  +N  N ++AL+
Sbjct: 348 VIVMGVYLVVSLSISALVNLYNRRVALR 375


>gi|303256338|ref|ZP_07342354.1| amino acid ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|330999033|ref|ZP_08322758.1| putative general L-amino acid transport system permease protein
           AapQ [Parasutterella excrementihominis YIT 11859]
 gi|302861067|gb|EFL84142.1| amino acid ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|329575775|gb|EGG57301.1| putative general L-amino acid transport system permease protein
           AapQ [Parasutterella excrementihominis YIT 11859]
          Length = 386

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 145/372 (38%), Positives = 223/372 (59%), Gaps = 30/372 (8%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q  + ++LT+IF   + N+  N+   N+  G  FL E+AGFEI + ++ ++S  +Y  A 
Sbjct: 25  QSAILVVLTIIFGSFIFNISANLAARNIHSGFAFLHEQAGFEIGESLISFSSTEAYFKAF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LVG +NT  ++   +I AT++G ++G  RLS + L+ ++   +VE +RNIP +V +  +Y
Sbjct: 85  LVGLLNTIKVSVVSIITATVLGVIIGLMRLSKHPLLKFLGAAHVEFYRNIPLIVQLLLIY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMF--LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
             +  +LP  D    + FG +  L+  GL F     ++ A  + F   +   L+ F TR 
Sbjct: 145 LIITELLP--DSMEAVNFGSWGLLSKAGLQFAVPASNSTACTWSF---VAAGLAFFLTR- 198

Query: 208 SRHFHEKTGKALPL-LYISTFLI---FGLPTLVLIALKYQLHF------DKPVLGQFNFI 257
                       PL L I T LI   F L T +++     L F       KP L  F   
Sbjct: 199 ------------PLFLKIYTGLISTVFSLSTALVVGGAAWLCFGIFGGWSKPELQGFAIE 246

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG+++SPEF++L+I L+ +T++ IAEI+R+G++AVPRGQ  AA ALG+T  +A   V+ P
Sbjct: 247 GGASLSPEFLALWIGLTFFTSSSIAEIIRAGVLAVPRGQWHAAEALGMTRLEAISYVIFP 306

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA++  IPPL SQY+NL KNSSLAV VG+ DLVS+G + IN  GQA+E+I+I M +YL L
Sbjct: 307 QALKLAIPPLASQYMNLTKNSSLAVVVGYPDLVSIGNSTINLNGQALEVIVIIMSVYLFL 366

Query: 378 SIMIALFMNRLN 389
           +++I++ MN +N
Sbjct: 367 NLVISVVMNSIN 378


>gi|218246880|ref|YP_002372251.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 8801]
 gi|257059922|ref|YP_003137810.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 8802]
 gi|218167358|gb|ACK66095.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 8801]
 gi|256590088|gb|ACV00975.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 8802]
          Length = 390

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/398 (37%), Positives = 228/398 (57%), Gaps = 26/398 (6%)

Query: 14  SRMKFLYDMR-VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL---SERAG 69
            ++ F  D R ++N+   IIL ++L  + +    N+  N ++  LS  + F+      A 
Sbjct: 5   EKIPFWRDSRFLNNLGQGIILVIVLISVGI-LATNLVTNFQRLGLSFDLSFIFDPKRPAS 63

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F I   ++PY +   Y+ AILVG +N+  +  SG+I A I+G  VG GRLS N LV  I 
Sbjct: 64  FRIGDSLIPYRATDPYSQAILVGLLNSLRVMISGIILAFILGLTVGLGRLSDNWLVRQIA 123

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDT-- 185
            VY+E  RN P L+ +FF Y +V   LP  D+        FL N+G  L +P   + T  
Sbjct: 124 TVYIETIRNTPLLLQLFFWYFAVFLKLPKIDNPAQFLNSFFLCNQGIYLPYPANNLQTWL 183

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEK------TGKALPLLYISTFLIFGLPTLVLIA 239
              +   + + GI++        R +++       TGK    +Y +  +   +  L+LI 
Sbjct: 184 ALSLIAINVICGIIIW-------RKYNDNIVQLGTTGK----IYQNLLIAILIIILLLII 232

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                 F +        +GG T+SPEF +L + L+ YTAAFIAE++R+G+ +V +GQ EA
Sbjct: 233 WGLNWQFPQYNTESKRILGGLTLSPEFATLLLGLTVYTAAFIAEVIRAGIQSVSQGQWEA 292

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGL      RLV+ PQA+R IIPPLTS++LNL+KNSSLAVA+G+ D+ ++  TI NQ
Sbjct: 293 AKALGLNSSLVMRLVIFPQALRVIIPPLTSEFLNLVKNSSLAVAIGYNDIYAIANTISNQ 352

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG+A+E++L+ M  YL  +++IA+ MN+ NA + +KE+
Sbjct: 353 TGKAVEMLLVVMTTYLIFNLIIAVIMNQFNAMVQIKER 390


>gi|166365943|ref|YP_001658216.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166088316|dbj|BAG03024.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 378

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 148/389 (38%), Positives = 227/389 (58%), Gaps = 20/389 (5%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL---SERAGF 70
            +  F YD R   I +Q+I+ L++ +IF +   N+  N ++  LS G GFL      A F
Sbjct: 5   QKNSFWYDERFQKIFLQVIILLIVCLIFWFFGRNLVINFQRLRLSFGFGFLFDPDRPASF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    + Y+   +Y  A+LVG +N+  +  SG+  A  +G ++G GRLS N L+  +  
Sbjct: 65  AIGDSPIAYSPTDTYFRALLVGLLNSLRIMISGIFLAISLGIVIGLGRLSDNWLIRQLAT 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAK 188
           +YVE  RN P L+ +FF Y +V   LP  + S+     +FLNN G  L FP  +  T   
Sbjct: 125 IYVETIRNTPLLLQLFFWYFAVFLKLPKIEESLEFFGSVFLNNSGVYLPFPANSFRTWLA 184

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + +   +LGI+LS+F        + K   +L L    T L+  +   ++  L++Q     
Sbjct: 185 LAIM--ILGIILSVF-------LYLKNKLSLCL----TSLLILVIIPLIWGLQWQSPQVN 231

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+    +F  G  +S EF +L I L+ YTAAFIAE VR G+ +V RGQ EAA ALGL   
Sbjct: 232 PLNQNIDF--GLHLSSEFATLLIGLTVYTAAFIAETVRGGIQSVNRGQWEAAKALGLKPL 289

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              RLV+ PQA+  IIPPLT++ LNL+KNSSLA+A+G+ D+ ++  TI NQTG+A+E+++
Sbjct: 290 LVMRLVIFPQALPVIIPPLTNECLNLVKNSSLAIAIGYNDIYAISSTIANQTGKAVEMLI 349

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M  YL  +++I+L MN+LN ++ ++E+
Sbjct: 350 VVMATYLFFNLVISLTMNQLNKRVKIQER 378


>gi|254475629|ref|ZP_05089015.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Ruegeria sp. R11]
 gi|214029872|gb|EEB70707.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Ruegeria sp. R11]
          Length = 410

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 156/394 (39%), Positives = 230/394 (58%), Gaps = 20/394 (5%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +++ Q I AL+L +   +  NN+  N+  + L++   FL + +G++I+Q +V Y 
Sbjct: 20  DTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYNFLGDPSGYDINQRLVEYD 79

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S SS+A A LVG +NT  ++    I ATI G + G  RLS N LV+ +  VYVE+FRNIP
Sbjct: 80  SQSSHARAALVGVLNTLLVSVLACITATIFGVIAGVLRLSNNWLVSKLMAVYVEIFRNIP 139

Query: 141 PLVVIFFLYKSVLSVLPIPDH--------SIVLPFGMFLNNRGLSFPTLTMDT----NAK 188
            L+ I  ++  + +V+P P          S+VL    F  NRG+  P    +T    +A 
Sbjct: 140 VLIWIIIIFTIMTAVMPGPREFRGDNATSSMVLDLFAF-TNRGVYIPMPWFETGLFASAT 198

Query: 189 IFVFSFVLGIVLSLFATRL----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +     +  +V S F  R     +    E+TG      +I+  +   L  LVL+     L
Sbjct: 199 MNWLLVIATLVGSFFVMRKVENNATKTQEETGIRPNTKWIALGVW--LVPLVLLLFLMGL 256

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALG
Sbjct: 257 SWEVPALKGFNFSGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINKGQTEAAAALG 316

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQA 363
           L   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+  ++GG  +NQTG+A
Sbjct: 317 LRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGRA 376

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE +L+ M  YL+ S+ I++ MN  NA + LKE+
Sbjct: 377 IECVLLLMLFYLTASLTISMVMNVYNASVKLKER 410


>gi|222102264|ref|YP_002546854.1| ABC-type amino acid transport system, permease component
           [Agrobacterium radiobacter K84]
 gi|221728381|gb|ACM31390.1| ABC-type amino acid transport system, permease component
           [Agrobacterium radiobacter K84]
          Length = 397

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 145/370 (39%), Positives = 209/370 (56%), Gaps = 18/370 (4%)

Query: 35  LLLTVIFLWCVN-NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGF 93
           LL+    LW    N+   M +  +  G  FLS+RA FEI + ++ Y+S  SY  A+L G 
Sbjct: 39  LLVCCTVLWYFGINIAATMRRLGIEPGFAFLSQRANFEIGESLIAYSSADSYGRALLAGL 98

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           VNT ++A  G I +T +GT +G  +L+ N ++    R YVE+FRN P L++  FL+ ++ 
Sbjct: 99  VNTIYVAVLGCILSTALGTALGIAQLTRNLVLTSFVRSYVEIFRNTP-LLLQLFLWSAIF 157

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRL--SR 209
             LP   ++I L  G FL+NRGL  P L +  +A +     S + G+++ +   RL   R
Sbjct: 158 QNLPAARNAIKLA-GAFLSNRGLYVPKLLLAGDAPVASTALSVLCGLIVVIALRRLLLGR 216

Query: 210 HFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
            F+  +   A  +   +TF + G            +  D P  G FN  GG ++SPEF  
Sbjct: 217 PFYATQISLAAIIAASATFWLSG----------GGIDLDLPTKGGFNITGGLSLSPEFAG 266

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L   L   +AA +AEIVR G+ +V  GQ EAA +LGL      RL++LPQA+R I P +T
Sbjct: 267 LLAGLVFNSAATVAEIVRGGIQSVQNGQWEAARSLGLRPGHIMRLIVLPQALRVITPLMT 326

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S YL+L KNSSLAVA+GF DLV+V  T  N TGQ +E I I    YLSL++ ++L MN  
Sbjct: 327 SSYLDLTKNSSLAVAIGFPDLVNVANTTANTTGQTLEAIAIIAGAYLSLNLAVSLAMNLF 386

Query: 389 NAKIALKEKK 398
           N++I   E +
Sbjct: 387 NSRIVQIEGR 396


>gi|261317402|ref|ZP_05956599.1| amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261296625|gb|EEY00122.1| amino acid ABC transporter [Brucella pinnipedialis B2/94]
          Length = 208

 Score =  222 bits (566), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 106/205 (51%), Positives = 151/205 (73%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG
Sbjct: 4   ALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLG 63

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  R
Sbjct: 64  TFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMR 123

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM 
Sbjct: 124 LIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMV 183

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           IYL +S++++  MN  NAK+AL E+
Sbjct: 184 IYLGISLIVSGLMNWFNAKMALVER 208


>gi|163742835|ref|ZP_02150219.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
 gi|161383799|gb|EDQ08184.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
          Length = 361

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 207/355 (58%), Gaps = 3/355 (0%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +NV  N++   L+ G GFL   A F+I   +VPY    SYA   ++G  NT  +A   + 
Sbjct: 7   DNVSRNLQNLGLASGFGFLDIEAPFDISWSVVPYEPGDSYARVYVIGITNTLIVAAMAIA 66

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-V 164
            +T +G L+G  RLS N L++ +  VYVEV RN P L+ + F + +V S+LP P   + V
Sbjct: 67  ASTGLGFLIGIARLSRNWLISRLASVYVEVVRNTPALIQVLFWFLAVFSILPRPKDGVDV 126

Query: 165 LPFGMF-LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              G+  +NNRG+ FP         + + +  + +V ++     +R     TG+  P+  
Sbjct: 127 AGLGILQVNNRGIYFPRALPQDGFNVTLLAIAIAVVAAVVLGIWARRRRILTGQRFPVAL 186

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   ++   P  V +     L+++ PVL  FN  GG +  P   ++ ++LS Y AA+I E
Sbjct: 187 VMPAILVLFPATVFVLTGAPLNWEIPVLKGFNLTGGISFPPAMCAVVLSLSIYHAAYIGE 246

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            VR+G+++V  GQ EAA +LG+    + R+++LPQA+R+I+P L S ++N +KN+SLAVA
Sbjct: 247 AVRAGIMSVSPGQGEAAFSLGIKSSWSMRMIVLPQALRAIVPQLISNWMNAVKNTSLAVA 306

Query: 344 VGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GF DLV++   T +NQ G A+EI+ + M  Y S+SI I+L +N  N ++ LKE+
Sbjct: 307 IGFPDLVALFLQTSLNQVGYAVEIVAMVMIFYCSVSITISLLLNYYNKRVQLKER 361


>gi|326794955|ref|YP_004312775.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326545719|gb|ADZ90939.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 418

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/358 (38%), Positives = 208/358 (58%), Gaps = 11/358 (3%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +N  NN+++  +  G  FL   AGF I   ++PY S  +Y     VG +NT  L+   + 
Sbjct: 66  SNAANNLDRLGMHFGFDFLQVTAGFNISWSVIPYDSSMTYWRVFAVGVLNTLVLSALVIF 125

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
             TI+GT VG  RLS N L++   R YVE+ RN+P L+ + F +  V S LP P  S  +
Sbjct: 126 VGTILGTFVGILRLSNNPLISQFARWYVEIVRNVPLLIQVIFWFTVVFSTLPPPRKSYSI 185

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLY 223
               FLNNRGL  PT+ +  +   +VF+ V+ +   L+A   + SR  H KTGK     Y
Sbjct: 186 ADVFFLNNRGLYIPTIELSISFW-WVFALVIALGAGLWAIIRQSSRSVH-KTGKRTTTFY 243

Query: 224 ISTFL---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           I   +   IF L  L+L        +  P L  FNF  G+ +     + ++A++ Y +A 
Sbjct: 244 ILVLIWCVIFALSALLLAQWG---TWSIPELKGFNFRDGAFLPASLGAAFVAMTVYRSAA 300

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE VR+G+ ++ RGQ EAA  +G +  ++ RL+L+PQA+R+IIPP+T+ +L   K+SSL
Sbjct: 301 IAETVRAGMQSIDRGQSEAAFTIGFSRFQSLRLILIPQAVRAIIPPMTNSWLAATKDSSL 360

Query: 341 AVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AVA+GF +LVSV   T INQTG+A+EII + M  Y+ +S++I+  +N+ N  +  K +
Sbjct: 361 AVAIGFPELVSVFMQTSINQTGRALEIISMVMGFYIVISLVISYLLNKYNDLVQYKVR 418


>gi|126659577|ref|ZP_01730708.1| putative amino acid ABC transporter permease protein [Cyanothece
           sp. CCY0110]
 gi|126619120|gb|EAZ89858.1| putative amino acid ABC transporter permease protein [Cyanothece
           sp. CCY0110]
          Length = 392

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/358 (39%), Positives = 208/358 (58%), Gaps = 10/358 (2%)

Query: 46  NNVYNNMEKSNLSLGIGFLSE---RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           NN+ NN  +  L+ G GF+ +    + F +    +PY     Y  AILVG +N+  +  +
Sbjct: 39  NNLINNFRQLGLTFGFGFIFDPDLNSRFNLGDSPIPYQPTDPYYRAILVGLLNSLRVMIT 98

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
           G+I A  +G +VG GRLS N LV  I  +YVE+ RN P L+ +FF Y +V    P  +  
Sbjct: 99  GIILAFFLGVIVGLGRLSDNWLVQKIATIYVEIIRNTPLLLQLFFWYFAVFLKFPKINDP 158

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF---HEKTGKAL 219
           +++   +FL+N+G+  P    +    + + +  LG +++    R           TGKA 
Sbjct: 159 LIVFNTIFLSNQGVYLPFPLSNLQTLLAILALFLGGIMAFLIWRKQTKVIIQQGTTGKAY 218

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            +  IS  ++     ++   L +Q       L Q     G  +SPEF +L   L+ YTAA
Sbjct: 219 NISLISILIL--SILIIFFGLYWQFPNYDTQLQQIQ--NGLNLSPEFATLLTGLTIYTAA 274

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAE+VRSG+ +V +GQ EAA ALGL    A RLV+ PQA+R +IPPLTS++LNL KNSS
Sbjct: 275 FIAEVVRSGIQSVSKGQWEAAKALGLNSGLAMRLVIFPQALRVMIPPLTSEFLNLAKNSS 334

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LAVA+G+ D+ +V  TI NQTG++IE++LI M  YL  +++I+  MN+LN  + LKEK
Sbjct: 335 LAVAIGYNDIYAVSNTISNQTGKSIEMLLIVMATYLIFNLIISSGMNQLNHLVQLKEK 392


>gi|265988439|ref|ZP_06100996.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Brucella
           pinnipedialis M292/94/1]
 gi|264660636|gb|EEZ30897.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Brucella
           pinnipedialis M292/94/1]
          Length = 317

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 106/205 (51%), Positives = 151/205 (73%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P LG
Sbjct: 113 ALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLG 172

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  R
Sbjct: 173 TFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMR 232

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM 
Sbjct: 233 LIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWMV 292

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           IYL +S++++  MN  NAK+AL E+
Sbjct: 293 IYLGISLIVSGLMNWFNAKMALVER 317


>gi|126731934|ref|ZP_01747737.1| amino acid ABC transporter, permease protein [Sagittula stellata
           E-37]
 gi|126707466|gb|EBA06529.1| amino acid ABC transporter, permease protein [Sagittula stellata
           E-37]
          Length = 417

 Score =  219 bits (558), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/396 (35%), Positives = 229/396 (57%), Gaps = 18/396 (4%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           ++D R  ++  Q +LAL++  +    + N   N+   N   G  F    +  +I      
Sbjct: 23  VFDSRARSLFFQGVLALIIIGLIWLALQNAAQNLADQNKEFGFDFFDRPSDIQILTTFGT 82

Query: 79  YTSD-----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +  D     S+     L+   NT  +A +G+  ATI G L+G  RLS+N ++     +YV
Sbjct: 83  WLLDYQPGQSTIFDVFLLSIANTLIVAIAGIFFATIWGFLLGIFRLSSNFVLRGFATIYV 142

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSI---VLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           E+ RN+P L+ IFF + +V+ ++   +  +   ++P  +  + +G+  P   ++      
Sbjct: 143 ELLRNVPLLLQIFF-WTAVMRIVAPSERGVYTTLIPGLLQFDAKGMYGPFPIVEDGFGFT 201

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL------IALKYQL 244
           + +F++  + +    R ++   +KTG+  P+  +S  +I  LPTLV       I +++  
Sbjct: 202 LAAFIIACIGAWAYARWAKKRQDKTGQPSPVFLVSLGMIVVLPTLVYLITGRPITIEWPN 261

Query: 245 HF-DKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +  + P+  Q F    GS ++PEF++L++AL  YTAAFIAEIVR+G+ AVP+GQ EAA A
Sbjct: 262 YVTEGPIFRQGFEKGVGSYIAPEFVALFLALFTYTAAFIAEIVRAGIQAVPKGQSEAAGA 321

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL      R V+LPQA R I+PPLTSQYLNL KNSSLA A+G+ +LV+   GTI+NQ G
Sbjct: 322 LGLPDGLTMRKVVLPQAFRVIVPPLTSQYLNLTKNSSLAAAIGYPELVAAFAGTILNQVG 381

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +AIEII + + +YL++S++ + FMN  N ++AL E+
Sbjct: 382 RAIEIIAVVILVYLTISLLTSAFMNWFNNRVALVER 417


>gi|284052500|ref|ZP_06382710.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira platensis str. Paraca]
          Length = 390

 Score =  218 bits (556), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/359 (39%), Positives = 208/359 (57%), Gaps = 17/359 (4%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N+  N+++S +  G GFL+  AGF I + I+PY     Y   +L G VNT  + F G+I 
Sbjct: 41  NLNQNLQRSGIRFGFGFLNSTAGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIIL 100

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
            TI+G + G    S+N LV  I  VYVE+ RN P L+ + F Y   L +  + D   V  
Sbjct: 101 TTIVGIIAGISYFSSNWLVRQIGLVYVEIVRNTPLLLQLLFWYGIFLQLPSVSDRLGVFD 160

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFV---FSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
             +FL  RG+  P     +++ I+V   F  +  I       + ++   EK     P L 
Sbjct: 161 -AIFLTQRGIFIP---WPSSSLIWVWLGFLVIAAIASFWIWKQRTKIMVEKGASGQPQL- 215

Query: 224 ISTFLIFGLPTLV-LIALKYQLHFDKPVL-GQFN---FIGGSTVSPEFMSLYIALSCYTA 278
               +  G+  LV L+ + +   ++ P + G  N     GG  ++ EF +L + L  YTA
Sbjct: 216 ----IALGIIALVSLLIILFGFGWEVPAITGTENNPVLRGGIRLTIEFSALLVGLVFYTA 271

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEIVR+G+ +V +GQ EAA +LGL      RLV+ PQA+R IIPPL SQYLNL KNS
Sbjct: 272 AYIAEIVRAGIQSVAKGQWEAARSLGLKPGLVMRLVVFPQALRVIIPPLNSQYLNLAKNS 331

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SLA+AV +ADL +V  T  NQ+G+A+E++LI M  YL+++++I+LFMN LN ++ L+E+
Sbjct: 332 SLAIAVAYADLYNVANTTFNQSGRAVEVMLIIMATYLTINLIISLFMNFLNRRVQLQER 390


>gi|291569087|dbj|BAI91359.1| putative ABC transporter permease protein [Arthrospira platensis
           NIES-39]
          Length = 390

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/359 (38%), Positives = 208/359 (57%), Gaps = 17/359 (4%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N+  N+++S +  G GFL+  AGF I + I+PY     Y   +L G VNT  + F G+I 
Sbjct: 41  NLNQNLQRSGIRFGFGFLNSTAGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIIL 100

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
            TI+G + G    S+N LV  I  VYVE+ RN P L+ + F Y   L +  + D   V  
Sbjct: 101 TTIVGIIAGISYFSSNWLVRQIGLVYVEIVRNTPLLLQLLFWYGIFLQLPSVSDRLGVFD 160

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFV---FSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
             +FL  RG+  P     +++ I+V   F  +  I       + ++   EK     P L 
Sbjct: 161 -AIFLTQRGIFIP---WPSSSLIWVWLGFLVIAAIASFWIWKQRTKIMVEKGASGQPQL- 215

Query: 224 ISTFLIFGLPTLV-LIALKYQLHFDKPVL-GQFN---FIGGSTVSPEFMSLYIALSCYTA 278
               +  G+  LV L+ + +   ++ P + G  N     GG  ++ EF +L + L  YTA
Sbjct: 216 ----IALGIIALVSLLIILFGFGWEVPAITGTENNPVLRGGLRLTIEFSALLVGLVFYTA 271

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEIVR+G+ +V +GQ EAA +LGL      RLV+ PQA+R IIPPL SQYLNL KNS
Sbjct: 272 AYIAEIVRAGIQSVAKGQWEAARSLGLKPGLVMRLVVFPQALRVIIPPLNSQYLNLAKNS 331

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SLA+AV +ADL +V  T  NQ+G+A+E+++I M  YL+++++I+LFMN LN ++ L+E+
Sbjct: 332 SLAIAVAYADLYNVANTTFNQSGRAVEVMVIIMATYLTINLIISLFMNFLNRRVQLQER 390


>gi|159029747|emb|CAO87825.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 378

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 148/391 (37%), Positives = 225/391 (57%), Gaps = 24/391 (6%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL--SER-AGF 70
            +  F YD R   I +Q+I+ L++ +IF +   N+  N ++  LS G GFL  S+R A F
Sbjct: 5   QKNSFWYDERFQKIFLQVIILLIVCLIFWFFCRNLVINFQRLRLSFGFGFLFDSDRPASF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    + Y+   +Y  A+LVG VN+  +  +G+  A  +G ++G GRLS N L+  +  
Sbjct: 65  AIGDSPIAYSPTDTYFRALLVGLVNSLRIMITGIFLAISLGIVIGLGRLSDNWLIRQLAT 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDT--N 186
           +YVE  RN P L+ +FF Y +V   LP  + S+     +FLNN G  L FP  +  T   
Sbjct: 125 IYVETIRNTPLLLQLFFWYFAVFLKLPKIEESLEFFGRVFLNNSGVYLPFPANSFRTWLA 184

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I +   ++ + LSL           K   +L L    T L+  +   ++  L++Q   
Sbjct: 185 LAIIILGIIISVFLSL-----------KNKLSLCL----TSLLILVIIPLIWGLQWQNPQ 229

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +F  G  +S EF +L I L+ YTAAFIAE VR G+ +V RGQ EAA ALGL 
Sbjct: 230 VNPLNQNIDF--GLHLSSEFATLLIGLTVYTAAFIAETVRGGIQSVNRGQWEAAKALGLK 287

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                RLV+ PQA+  IIPPLT++ LNL+KNSSLA+A+G+ D+ ++  TI NQTG+A+E+
Sbjct: 288 PLLVMRLVIFPQALPVIIPPLTNECLNLVKNSSLAIAIGYNDIYAISSTIANQTGKAVEM 347

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + + M  YL  +++I+L MN+LN ++ ++E+
Sbjct: 348 LTVVMATYLFFNLVISLTMNQLNKRVKIQER 378


>gi|329295741|ref|ZP_08253077.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 359

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/318 (39%), Positives = 186/318 (58%), Gaps = 1/318 (0%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           + ++N   N+    ++ G GFL   AGF I Q ++ Y+   +YA   +VG  NT  ++  
Sbjct: 37  YLIHNTVINLANRGITSGFGFLERNAGFGIVQHLIDYSEGDTYARVFMVGLTNTLLISAL 96

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+I+G  +G  RLS N L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 97  CIVFASILGFAIGLARLSDNWLLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQA 156

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F++NRGL  P      +    + +  + I       R +R    KTG+     
Sbjct: 157 LNAFDLAFVSNRGLYIPWPEYAPSTWPSLIALAIAIAAIAALFRFNRKHQLKTGQLRRTW 216

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +  LI  LP +         H+D P L  FNF GG  + PE  +L +ALS YT++FIA
Sbjct: 217 PAAAGLIVLLPLIAHTLFGAATHWDVPELRGFNFRGGFAMIPELAALTLALSIYTSSFIA 276

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++R+G+ +VP GQ EAA +LGL +    R V++PQAMR IIPPLTSQYLN++KNSSLA 
Sbjct: 277 EVIRAGIQSVPHGQSEAARSLGLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIIKNSSLAA 336

Query: 343 AVGFADLVSV-GGTIINQ 359
           A+G+ D++S+  GT++NQ
Sbjct: 337 AIGYPDMMSLFAGTVLNQ 354


>gi|197104925|ref|YP_002130302.1| ABC-type amino acid transport system, permease component
           [Phenylobacterium zucineum HLK1]
 gi|196478345|gb|ACG77873.1| ABC-type amino acid transport system, permease component
           [Phenylobacterium zucineum HLK1]
          Length = 388

 Score =  212 bits (540), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/319 (38%), Positives = 187/319 (58%), Gaps = 3/319 (0%)

Query: 51  NMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110
           N++   L LG+ FL +RAGF+I   ++P+  + +Y  AI V   NT +L+    + AT+I
Sbjct: 45  NLQARGLPLGLEFLGDRAGFKIADTVLPFGPEDTYLQAIGVAVANTVFLSALVCVAATVI 104

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           GT +G  RLSAN LVA +  V+VE  RN PP++++ FLY     V+P+     +LP G+ 
Sbjct: 105 GTALGVARLSANPLVAGLAAVWVEAMRNTPPVLLLIFLYAYWGQVMPVGGARELLP-GLL 163

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++ RG++ P L  +        +   G  +   A    R    +          +  ++ 
Sbjct: 164 VSIRGVAAPRLVAEWPLLGLAGALAAGAAVYGAAALAGRAAARRGRPRPHRAAAAGVIVL 223

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G   L   A+   L  + P     +  GG+ ++PEF +++  L+ YTAAFIAEIVRSG+ 
Sbjct: 224 G--ALAAFAIHPPLRLETPAATGDDLAGGARLTPEFATVFAGLTVYTAAFIAEIVRSGVQ 281

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VPRGQ EAA ALGL  R+  RLV  PQ +R I+PP+TSQY+N +KNS+LA+A+G+++ +
Sbjct: 282 SVPRGQWEAARALGLKERQILRLVAFPQMLRVIVPPMTSQYINTVKNSTLAIAIGYSEFM 341

Query: 351 SVGGTIINQTGQAIEIILI 369
           +V GT+IN+T   IE  LI
Sbjct: 342 TVMGTVINRTNHPIEGTLI 360


>gi|319940741|ref|ZP_08015082.1| hypothetical protein HMPREF9464_00301 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805801|gb|EFW02575.1| hypothetical protein HMPREF9464_00301 [Sutterella wadsworthensis
           3_1_45B]
          Length = 392

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/368 (38%), Positives = 215/368 (58%), Gaps = 12/368 (3%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87
           ++Q +L L+L         NV +N+   N+  G  FL+ RAGFEI + ++ Y+S      
Sbjct: 29  TLQAVLILILVAFIAVLATNVADNLAAKNIHSGFAFLNHRAGFEIGEQLIAYSSSDPLWK 88

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G +NT  ++   ++ AT++G +VG  RLS N +V ++   +VE +RN+P LV++  
Sbjct: 89  AFLTGLLNTLRISACTIVSATVLGVIVGLMRLSRNGVVRFLGAAHVEAYRNVPLLVLLLA 148

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGL--SFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           LY  V  +LP    +  L   ++L+  GL  + P   M    K  + + V+G+     A 
Sbjct: 149 LYLVVTELLPGVRQAWHLGNWIYLSKTGLLCAVPLWGM----KALLGALVVGVFGGWLAA 204

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFG-LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           +  +           +  +  FLIF  L  LV I       +D P   +F+  GG+ ++P
Sbjct: 205 KRLQRVQTNL-----IANMGGFLIFVILSALVWILCGVIGGWDHPTATRFSMRGGAAMTP 259

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++L++ L+ +T+A IAEIVR+G+ +V  GQ  AA ALGL   +A   V+ PQAMR I+
Sbjct: 260 EFLTLWLGLTLFTSASIAEIVRAGVESVRPGQWAAAAALGLKSGEAVSYVIFPQAMRLIM 319

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL SQ++ L KNSSLAV VG+ DLV+VG T++N TGQA+E+I I M +YL+++I+IA  
Sbjct: 320 PPLASQFMTLTKNSSLAVMVGYPDLVNVGTTVMNVTGQALEVICIIMGVYLTVNIIIAFI 379

Query: 385 MNRLNAKI 392
           MN  NA+I
Sbjct: 380 MNHFNARI 387


>gi|67922407|ref|ZP_00515918.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501]
 gi|67855751|gb|EAM50999.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501]
          Length = 392

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/391 (37%), Positives = 228/391 (58%), Gaps = 12/391 (3%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE---RAGF 70
            ++ F  D R+  + +Q+++  ++ ++ ++  NN+ NN  +  L+ G GF+ +    + F
Sbjct: 7   EKIPFWRDSRIIKVVIQVLVIGVILLLLVFFGNNLVNNFRQLGLTFGFGFIFDPELNSRF 66

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    +PY     Y  AILVG +N+  +  +G+I A I+G ++G GRLS N LV  I  
Sbjct: 67  NIGDSPIPYQPTDPYYRAILVGLLNSLRVMITGIILAFILGVIIGLGRLSDNWLVQKIAT 126

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL--SFPTLTMDTNAK 188
           VYVE+ RN P L+ +FFLY +V    P  D  +++   +FL+N+G+   FP   + T   
Sbjct: 127 VYVEIIRNTPLLLQLFFLYFAVFLKFPKIDAPLIIFNSVFLSNQGVYVPFPLANLQTFLA 186

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEK--TGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I    F  G++  L   + ++   ++  TG    L  I   ++  L  ++    ++   +
Sbjct: 187 ILTL-FFGGVIAFLIWRKQTQTIIQQGTTGNFYNLALIVIIIVSILTIILGFDWEFP-SY 244

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D  +        G  +SPEF +L   L+ YTA FIAE+VRSG+ +V +GQ EAA ALGL 
Sbjct: 245 DSQIK---RIQDGLNISPEFATLLAGLTIYTAGFIAEVVRSGIQSVSKGQWEAAKALGLN 301

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              A RLV+ PQA+R +IPPLTS++LNL KNSSLAVA+G+ D+ +V  TI NQTG++IE+
Sbjct: 302 SGLAMRLVIFPQALRVMIPPLTSEFLNLAKNSSLAVAIGYNDIYAVSNTISNQTGKSIEM 361

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L+ M  YL  +++I+  MN LN  + LKEK
Sbjct: 362 LLVVMATYLIFNLIISTVMNLLNRSVQLKEK 392


>gi|158334196|ref|YP_001515368.1| polar amino acid ABC transporter, permease protein, putative
           [Acaryochloris marina MBIC11017]
 gi|158304437|gb|ABW26054.1| polar amino acid ABC transporter, permease protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 389

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/376 (35%), Positives = 208/376 (55%), Gaps = 1/376 (0%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R+ N  +Q ++ LL+ +  ++   N+  N+++  L  G  FL  ++G  I + ++ Y+  
Sbjct: 14  RIRNGLIQGLVLLLIGLAVVYFGANLVQNLQRLRLPFGFDFLFAKSGPSIGETLIEYSPT 73

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            + A A  V  +NT  +   G++ AT++G  VG  RLS N LV  +   YVE  RN P L
Sbjct: 74  DNIARAFGVALLNTLRVVVLGIVLATVVGIGVGMARLSDNWLVRKLATFYVETLRNFPLL 133

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + + F Y +V   LP  ++ I LP  + L+  G++FP L  +     ++ +  +G V + 
Sbjct: 134 LQLLFWYLAVFLKLPTFENRIQLPGPIILSKNGVAFPWLKGNPATLPWILALAIGSVCAC 193

Query: 203 FATRLSRHFHEKTGK-ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
              R       + G+     L+    L+       LI  +       P + Q    GG  
Sbjct: 194 LLWRYLIRLQIEQGRITFAGLWSLLLLVGIGGGAALITQRLPFDVSLPHVDQRVVTGGLQ 253

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++ EF +L + L+ YTAAFIAEIVR+G+ +V  GQ EAA ALGL      R V+ PQA+R
Sbjct: 254 LTSEFSALLLGLTLYTAAFIAEIVRAGIRSVSIGQSEAARALGLKPTLVMRFVVFPQALR 313

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PPLTSQYLNL KNSSLAVAVG+ D+  V    +  TG+++EI+L+ M IYL++S++I
Sbjct: 314 VIVPPLTSQYLNLAKNSSLAVAVGYPDIYYVASASLEDTGRSVEIVLLLMAIYLTMSLLI 373

Query: 382 ALFMNRLNAKIALKEK 397
           ++ MN  N  I L E+
Sbjct: 374 SILMNLYNRSIQLVER 389


>gi|153821327|ref|ZP_01973994.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|126521145|gb|EAZ78368.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
          Length = 332

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 184/331 (55%), Gaps = 8/331 (2%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLEQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            ++ +   + + + GI    VLS++AT   R     TG+  P+      L    P LV  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQR----LTGQQTPMGRYILLLCVTFPVLVYF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L   +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ E
Sbjct: 242 LLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           AA++LGLT  K  +LV++PQA+R IIPPLTS
Sbjct: 302 AAMSLGLTRTKTLKLVIIPQALRIIIPPLTS 332


>gi|87120914|ref|ZP_01076806.1| general amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
 gi|86163752|gb|EAQ65025.1| general amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
          Length = 383

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 219/380 (57%), Gaps = 2/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D R   I  Q++  ++++    +   N+  N+ +  +S G  FL + AG++I   ++ 
Sbjct: 5   LRDERKRAIFDQVLFLVIVSAFIYYLSANLIENLNRLGISTGFSFLWQEAGYQIGGALID 64

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    SYA A +VG +NT    F  ++ A+I+G ++G  R+S N L+    R  +EV RN
Sbjct: 65  FDDTDSYALAHIVGLLNTLLATFLIIVSASILGFIIGILRMSPNPLMTNSIRYVIEVIRN 124

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP LV I   +   L + P+   S  +   +F++NRG+  P    ++     +F F+  +
Sbjct: 125 IPSLVHIVIWFSLALHLPPV-RQSFDIYNTVFISNRGIYLPDPNFESGMWGVLFLFICLL 183

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
             + F  R ++    +TGK       +T +I+G      +     + +  P L  F+F G
Sbjct: 184 AYAFFRKRKAQQLMRETGKYQATFLSNTLIIWGGTICAYLLFGLPITWQAPTLSGFDFDG 243

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T++PE  +++IALS Y ++ +AE+VR G+ +V +GQ EAA ALG+ +    ++V++PQ
Sbjct: 244 GITIAPELFAIWIALSIYFSSHVAELVRGGVQSVSKGQFEAASALGVRYSITMKMVVIPQ 303

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIYLSL 377
           AMR I+PPLT+ Y N+LK +SL VA+G+A++ +  GGT +N TGQAIE IL+ M  Y  +
Sbjct: 304 AMRVIVPPLTNVYQNILKTTSLGVAIGYAEMTATTGGTTLNLTGQAIECILLMMVSYGII 363

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S++IA  M+++N  +A+ E+
Sbjct: 364 SLIIAAIMDQINKHVAIVER 383


>gi|313680183|ref|YP_004057922.1| amino acid ABC transporter membrane protein 1, paat family
           [Oceanithermus profundus DSM 14977]
 gi|313152898|gb|ADR36749.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 392

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/356 (38%), Positives = 197/356 (55%), Gaps = 18/356 (5%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVP-----------YTSDSSYATAILVGFVNTFW 98
            NM   NL    GFL+E A F+I +G              Y        A++ GF+NT  
Sbjct: 39  TNMAARNLQFSFGFLTEPADFQIYEGYTVAKEQGRWILRLYHPSDQVWQAMVTGFLNTLR 98

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           ++F G++  T++G L+G GRLS+N LV  +   YVE+ RN P LV + F Y +V  +LP 
Sbjct: 99  VSFLGIVLTTVLGVLIGIGRLSSNWLVNRLSFAYVELIRNTPLLVQMVFWYLAVFLLLP- 157

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           P  +     G+ ++N+G+  P    D     F   F  G+ L          +       
Sbjct: 158 PIRTAPRFHGVIVSNKGVLIPWPVPDAAWASFAPYFYAGLALWALLWLARSLWRPPRW-- 215

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L +++    +GL  L L+     L    P +  F   GG  +SPEF S+ +AL  YTA
Sbjct: 216 --LYWLTPAAAWGL-GLYLVG-SIPLELSVPQVQGFRVEGGMQLSPEFSSVLLALVLYTA 271

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           ++IAEIVR  + ++P+GQ EA  +LGL++ +  RL++LPQAMR +IPPL +QYLNL KNS
Sbjct: 272 SYIAEIVRGAIQSLPKGQWEAPASLGLSYAQTLRLIILPQAMRIVIPPLGNQYLNLTKNS 331

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           SLA+A+ F +++SV  T +NQ G +IE ILI M  YLSLS+ I+  +N  N K+AL
Sbjct: 332 SLAIAIAFPEIMSVYETTVNQAGHSIEGILIVMAAYLSLSLFISALINWYNVKVAL 387


>gi|148240912|ref|YP_001220413.1| amino acid ABC transporter permease protein precursor
           [Bradyrhizobium sp. BTAi1]
 gi|146411288|gb|ABQ39741.1| amino acid ABC transporter permease protein precursor
           [Bradyrhizobium sp. BTAi1]
          Length = 371

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 215/381 (56%), Gaps = 17/381 (4%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  +I +Q +L   +       V   + N++   + +G  FLS  +   I + I+ Y 
Sbjct: 4   DARTRSIVIQCVLVAAVVGAAALLVTTTFTNLQTRGIPIGFDFLSMPSRIVISEAILSYK 63

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S   Y  AI+VG  NT +++   ++ ++++G +VG  RLS+N L A  CRV+VE+ RN P
Sbjct: 64  SRDPYYWAIVVGLANTVFVSALVIVFSSVLGLVVGVTRLSSNPLAAGTCRVWVEIARNSP 123

Query: 141 PLVVIFFLYKSVLSVLP-IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P+V++ FLY     VLP + D    LP G+F + RGL  P++ +       V   V G++
Sbjct: 124 PIVLLIFLYSLWWKVLPPVADALRPLP-GVFASMRGLMVPSVHISLATAGVVLIIVAGML 182

Query: 200 LSLFATRLS---RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
               A RL+   R+F        P L  +T  +     L L      +  D PV    NF
Sbjct: 183 F--LAPRLAGSLRNFR-------PALNWATVAVL---LLGLWFADATVSMDWPVFAGSNF 230

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  ++PE  ++ I L+ YT  FIAEIVR G+++V  GQ +A  ++GL+  K  RL+++
Sbjct: 231 QGGLELTPELSTILIGLTIYTTGFIAEIVRGGVLSVGSGQWDAGRSVGLSRSKILRLIVI 290

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R I+PPL SQY+N++KNS+LA+AVG+ D  +V  TII+++  +IE + I + +YL+
Sbjct: 291 PQMLRVIVPPLNSQYINVVKNSTLAIAVGYPDFFAVMNTIISKSSHSIEGVFIILGVYLA 350

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           L++ ++   N  N +IA+ E+
Sbjct: 351 LNLTLSSAANWYNRRIAIVER 371


>gi|119489533|ref|ZP_01622294.1| ABC-type permease for basic amino acids and glutamine [Lyngbya sp.
           PCC 8106]
 gi|119454612|gb|EAW35759.1| ABC-type permease for basic amino acids and glutamine [Lyngbya sp.
           PCC 8106]
          Length = 388

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/381 (36%), Positives = 216/381 (56%), Gaps = 10/381 (2%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSL-GIGFLSERAGFEIDQGIVPY 79
           D R   I+ Q+++ + +  +F+    N+  N++++  ++    FL+  AGF I + ++PY
Sbjct: 14  DSRFWKIAFQLVILIAVLSLFILLGTNLTRNLQQTGGTVFNFDFLNSTAGFGIGESLIPY 73

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            +  +Y+  +L G +N+  +   G+I  TI+G L G    S N L+  I   YVE+ RN 
Sbjct: 74  QATDNYSRVLLAGLLNSLRVMVLGIILTTILGVLAGVIYFSNNWLLRQITIYYVEIVRNT 133

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL-GI 198
           P L+ + F Y   L  LP    +  L   ++LN RG+  P      NA  F  + +L   
Sbjct: 134 PLLLQLLFWYGLFLQ-LPAIATTAKLFNAIYLNKRGVFLPW--PSGNAVWFWLAVLLIAA 190

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--FNF 256
           + S+   R       + GK+     I  +++  L  LV+I   + L + +P+  +     
Sbjct: 191 IASVVIWRWRIKIMVEQGKSGQPQLIILWIMGILAGLVII---FALGWQRPIPAENGRTI 247

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  ++ EF +L + L  YT A+IAEIVRSG+ +VP+GQ EAA +LGL      RLV+ 
Sbjct: 248 EGGLRMTIEFTALLVGLVVYTGAYIAEIVRSGIQSVPKGQWEAARSLGLKPGLVMRLVVF 307

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL SQYLNL KNSSLA+AV + D+ SV  T  NQ+G+ +E++LI M  YLS
Sbjct: 308 PQALRVIIPPLNSQYLNLAKNSSLAIAVAYPDIYSVANTTFNQSGRVVEVMLIIMATYLS 367

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           ++++I+L MN LN  + L+E+
Sbjct: 368 INLLISLTMNGLNKAVQLRER 388


>gi|282899900|ref|ZP_06307861.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195170|gb|EFA70106.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii
           CS-505]
          Length = 313

 Score =  206 bits (523), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/360 (36%), Positives = 191/360 (53%), Gaps = 76/360 (21%)

Query: 38  TVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTF 97
           TV  LW  NN  +N+ +  +SLG  FL  +A F+I + +V Y +  SY  A+ VG VN+ 
Sbjct: 30  TVNILW--NNANHNLRQLGISLGWDFLERQASFDIGESLVKYDATDSYGRALGVGLVNSL 87

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            +A  G++ AT++G   G GRLS N LV  I  VYVE+FRN P L+ + F Y        
Sbjct: 88  RVATLGILFATVVGITAGIGRLSDNWLVRNISLVYVEIFRNTPLLLQLLFWY-------- 139

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                    FG+FL     S P        KI +F                  +  + G 
Sbjct: 140 ---------FGVFL-----SLP----RPENKISLFGL---------------GYLSQNGI 166

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            LP                   L YQ               G  ++PEF +L + L+ YT
Sbjct: 167 DLP------------------TLTYQ---------------GVNLTPEFSTLLLGLTFYT 193

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AFIAEIVR+G+ +V +GQ EA ++LGL      RL++ PQA++ I+PPLTSQYLNL+KN
Sbjct: 194 GAFIAEIVRAGIKSVSQGQREAGLSLGLRPGLLMRLIIFPQALKLIVPPLTSQYLNLMKN 253

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SSLA+A+G+ D+  V  T  NQTG+A+E++++ M  YL+LS+ I++ MN +N  + +KE+
Sbjct: 254 SSLAIAIGYPDIYFVASTTFNQTGKAVEVMILLMITYLTLSLTISIVMNLVNRTVQIKER 313


>gi|148555538|ref|YP_001263120.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
 gi|148500728|gb|ABQ68982.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
          Length = 374

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 197/348 (56%), Gaps = 11/348 (3%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
             V +NME+ ++ L +GFL   A F I +  + Y    + A A +VG  N+  L    ++
Sbjct: 32  RTVSDNMERQDMVLSLGFLRSTAEFPIAESFLAYAPGDTIAWAFVVGLGNSIALTLLIIV 91

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            +T+ G  +   R S + L   +   +V++ RN+P +V + F Y  +L   P P  +   
Sbjct: 92  LSTMAGVPIALARHSGHMLARTLAGGFVDLVRNVPLVVQLLFWYGVILMAFP-PARAAAQ 150

Query: 166 PF-GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           P  G+FL NRG++  T+ +   A   + + + G+ L+L  T    H H+ +   L  +  
Sbjct: 151 PLPGLFLTNRGITVTTVGITGTALPMIVTVLGGLTLTLI-TAWRGHLHKASLCTLGTIVA 209

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            + L         I L   L  D P   +FNF GG T++PEF+++      Y +AF AEI
Sbjct: 210 GSAL--------WIVLDLGLARDVPHFDRFNFTGGLTLTPEFVAVLWGSVIYASAFAAEI 261

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL  VPRGQ EA+ ALGL+ R++ RLV++PQA+R I+PP+ SQ++ +LKNS+LA+ V
Sbjct: 262 VRGGLDGVPRGQWEASRALGLSKRQSLRLVIVPQALRMIVPPMNSQFITILKNSTLALVV 321

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G+ DL  V  T IN TGQ +E + I M ++ +L+  I+L MNRLNA++
Sbjct: 322 GYPDLNFVANTAINHTGQGLEGVAILMLVFFTLASAISLAMNRLNARV 369


>gi|309785600|ref|ZP_07680231.1| general L-amino acid transport system permease protein aapQ
           [Shigella dysenteriae 1617]
 gi|308926720|gb|EFP72196.1| general L-amino acid transport system permease protein aapQ
           [Shigella dysenteriae 1617]
          Length = 236

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/229 (48%), Positives = 153/229 (66%), Gaps = 1/229 (0%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL+NRGL  P+  +      F+ + V+ IVLS+   R ++ +  KTG+      I+  LI
Sbjct: 8   FLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLI 67

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIAEI+R+G+
Sbjct: 68  IGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGI 127

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP GQ EAA +LGL +    R V++PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+
Sbjct: 128 QAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDM 187

Query: 350 VSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  N +IA+ E+
Sbjct: 188 VSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER 236


>gi|81299058|ref|YP_399266.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus elongatus PCC 7942]
 gi|81167939|gb|ABB56279.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus elongatus PCC 7942]
          Length = 377

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 209/375 (55%), Gaps = 14/375 (3%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           F  D R+     Q+++ L++ +  +W V+N+  N+ +  LSL   +L + AGF I +  +
Sbjct: 11  FWRDERLWRWVWQLLVLLVVGLGAIWLVDNLVYNLSQRGLSLSFDWLDQSAGFNIGESAI 70

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y +  SYA A++VG VN+  +   G+I  T+IGTL G    S N L+  + R YV V R
Sbjct: 71  AYRTADSYARALVVGLVNSLRVIAIGLILTTVIGTLAGVAAFSENWLLRQLSRGYVAVVR 130

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N P L+ +   Y  +L  LP           ++L+ +G+  P     T   + V   +L 
Sbjct: 131 NTPLLLQLIVWYFPILLSLPAAQQPWHWLGSLYLSKQGIYLPW--PQTPGWLVV---ILA 185

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I L LF + L++   +++ +    LY +  ++  L  L  ++   QL   +P  GQ    
Sbjct: 186 IALVLFVSWLAQR--QRSPRDWRWLYGAIAVVTVLMLLTQLSWPQQL---QP--GQIR-- 236

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  +S EF +L + L  YT AFI EI+R G+++VP GQ EAA ALGLT  +    +++P
Sbjct: 237 GGLRLSLEFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVVP 296

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R I+P L SQY+   KNSSLA+AVG+ DL +   T +NQTG+ +E+ LI M  YL++
Sbjct: 297 QALRVIVPSLNSQYVGFAKNSSLAIAVGYPDLYATAQTTLNQTGRPVEVFLILMLTYLAI 356

Query: 378 SIMIALFMNRLNAKI 392
           + +I+  MN L  ++
Sbjct: 357 NAVISAGMNGLQQRL 371


>gi|56751275|ref|YP_171976.1| basic amino acids and glutamine ABC transporter permease
           [Synechococcus elongatus PCC 6301]
 gi|56686234|dbj|BAD79456.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus elongatus PCC 6301]
          Length = 379

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/375 (35%), Positives = 209/375 (55%), Gaps = 14/375 (3%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           F  D R+     Q+++ L++ +  +W V+N+  N+ +  LSL   +L + AGF I +  +
Sbjct: 13  FWRDERLWRWVWQLLVLLVVGLGAIWLVDNLVYNLSQRGLSLSFDWLDQSAGFNIGESAI 72

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y +  SYA A++VG VN+  +   G+I  T+IGTL G    S N L+  + R YV V R
Sbjct: 73  AYRTADSYARALVVGLVNSLRVIAIGLILTTVIGTLAGVAAFSENWLLRQLSRGYVAVVR 132

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N P L+ +   Y  +L  LP           ++L+ +G+  P     T   + V   +L 
Sbjct: 133 NTPLLLQLIVWYFPILLSLPAAQQPWHWLGSLYLSKQGIYLPW--PQTPGWLVV---ILA 187

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I L LF + L++   +++ +    LY +  ++  L  L  ++   QL   +P  GQ    
Sbjct: 188 IALVLFVSWLAQR--QRSPRDWRWLYGAIAVVTVLMLLTQLSWPQQL---QP--GQIR-- 238

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  +S EF +L + L  YT AFI EI+R G+++VP GQ EAA ALGLT  +    +++P
Sbjct: 239 GGLRLSLEFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVVP 298

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R I+P L SQY+   KNSSLA+AVG+ DL +   T +NQTG+ +E+ LI M  YL++
Sbjct: 299 QALRVIVPSLNSQYVGFAKNSSLAIAVGYPDLYATAQTTLNQTGRPVEVFLILMLTYLAI 358

Query: 378 SIMIALFMNRLNAKI 392
           + +I+  MN L  ++
Sbjct: 359 NAVISAGMNGLQQRL 373


>gi|323154324|gb|EFZ40526.1| general L-amino acid transport system permease aapQ domain protein
           [Escherichia coli EPECa14]
          Length = 247

 Score =  203 bits (516), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 158/243 (65%), Gaps = 1/243 (0%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
           LP P  ++      FL+NRGL  P+  +      F+ + V+ I+LS+   R ++ +  KT
Sbjct: 5   LPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIILSVGLFRFNKTYQIKT 64

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           G+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L +ALS 
Sbjct: 65  GQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSV 124

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTSQYLN++
Sbjct: 125 YTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIV 184

Query: 336 KNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  N +IA+
Sbjct: 185 KNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAI 244

Query: 395 KEK 397
            E+
Sbjct: 245 VER 247


>gi|160899042|ref|YP_001564624.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160364626|gb|ABX36239.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 349

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 182/350 (52%), Gaps = 59/350 (16%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +N   NM    ++ G GFL + AGF I +G++PY    SY  A+  G  NT   A   + 
Sbjct: 53  HNASRNMAARGIAGGFGFLEQTAGFSISEGLLPYEPGDSYLRAVAAGVANTVRAAVPALA 112

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT++G L+G   ++ + L+    R+YV+V RNIP LV +   Y ++ S+LP  DH + +
Sbjct: 113 LATMLGLLLGVAAVARHPLLRGAVRLYVDVARNIPLLVQVLLWYFALTSLLPDVDHPLAI 172

Query: 166 -PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLY 223
            P G                                          F  K G ALP  +Y
Sbjct: 173 GPLG------------------------------------------FLSKAGLALPGPVY 190

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            S                   H+  P  G F+  GG  ++PEF++L  AL  Y AA+ AE
Sbjct: 191 DSA---------------AGWHWSSPQPGMFSIDGGLALTPEFLALVGALGLYAAAYCAE 235

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR+GL AVPRGQ  AA ALG+   +  RLV+LPQA+R IIPP T+  L+ +KNSSLAVA
Sbjct: 236 IVRAGLQAVPRGQWNAASALGMRRGQQLRLVVLPQALRVIIPPYTNLALSTIKNSSLAVA 295

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +G+ D+V V  T ++QTGQAIE + I   +YL+++++ +L +N  N + A
Sbjct: 296 IGYPDVVMVANTAMSQTGQAIECVTIIAVVYLAINLLTSLALNAFNQRSA 345


>gi|282897629|ref|ZP_06305629.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9]
 gi|281197552|gb|EFA72448.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9]
          Length = 313

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 135/379 (35%), Positives = 200/379 (52%), Gaps = 78/379 (20%)

Query: 21  DMRVHNISVQI--ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           + R   I++Q+  IL  L  V  LW  NN  +N+ +  +S G  FL ++A F+I + +V 
Sbjct: 11  NYRFWQIAIQVVAILMALGIVNILW--NNANHNLRQLGISFGWDFLGQQASFDIGESLVK 68

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y +  SY  A+ VG VN+  +A  G++ AT++G   G GRLS N LV  I  VYVE+FRN
Sbjct: 69  YDATESYGRALAVGLVNSLRVATLGILLATVVGITAGIGRLSDNWLVRNISLVYVEIFRN 128

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P L+ + F Y                 FG+FL     S P        KI +F      
Sbjct: 129 TPLLLQLLFWY-----------------FGVFL-----SLP----KPENKISLFGL---- 158

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                       +  + G  LP                   L YQ               
Sbjct: 159 -----------GYLSQNGIDLP------------------TLTYQ--------------- 174

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++PEF +L + L+ YT AF+AEIVR+G+ +V +GQ +A ++LGL      RL++ PQ
Sbjct: 175 GVNLTPEFCTLLLGLTFYTGAFVAEIVRAGIKSVSQGQWDAGLSLGLRSGLLMRLIIFPQ 234

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++ I+PPLTSQYLNL+KNSSLA+A+G+ D+  V  T  NQTG+A+E++++ M  YL+LS
Sbjct: 235 ALKLIVPPLTSQYLNLMKNSSLAIAIGYPDMYFVASTTFNQTGKAVEVMVLLMITYLTLS 294

Query: 379 IMIALFMNRLNAKIALKEK 397
           + I++ MN +N  + +KE+
Sbjct: 295 LTISIVMNLINRTVQIKER 313


>gi|39935695|ref|NP_947971.1| polar amino acid ABC transpor permease AapQ-2 [Rhodopseudomonas
           palustris CGA009]
 gi|39649548|emb|CAE28070.1| polar amino acid ABC transpor permease protein, aapQ-2
           [Rhodopseudomonas palustris CGA009]
          Length = 389

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/353 (35%), Positives = 212/353 (60%), Gaps = 7/353 (1%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +N+   M +  L+ G GFL   A FEI +  +P+ +  SYA AI VG +NT  +A    I
Sbjct: 42  SNIAATMARIGLTPGFGFLERAAKFEIGESTIPFRAGDSYARAIAVGVLNTAKVAVVSCI 101

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT++G  +   RL+ + +++ + R  +EV RN P L+ +FF + ++   LP P  ++V 
Sbjct: 102 LATVLGVALALMRLAGHPVLSGLVRWSIEVVRNTPLLLQLFF-WIALAHALPPPRRAVVW 160

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              +FL NRG+  P++ +   + + + + +  I+L   A      +  +T   L  L + 
Sbjct: 161 FDCVFLTNRGVYLPSVIIAEGSWMAI-TAIAAILLGWLAL----LWRSRTRGPLSPLPLG 215

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I  L  +V+ A  +++    PV+  FN  GG++++PEF +L + L+   AA  AEIV
Sbjct: 216 LVAILAL-AVVIYASGFRISLHSPVVQGFNIQGGTSLTPEFAALLVGLTVKFAAIFAEIV 274

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+++V R Q +AA ALGL+  +  RLV+LPQA+R I P  TS YL+++K+SSLAVA+G
Sbjct: 275 RAGILSVRREQWDAARALGLSEFQIVRLVVLPQALRVITPLATSCYLDVIKDSSLAVAIG 334

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + DL+++  T  N TGQA+E +LI + +YL+L++ ++  MN  NA++A++  +
Sbjct: 335 YPDLMNITNTTANTTGQALETLLIVVALYLTLNLSVSAVMNVYNARVAMRGGR 387


>gi|192291278|ref|YP_001991883.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285027|gb|ACF01408.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 389

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/353 (35%), Positives = 210/353 (59%), Gaps = 7/353 (1%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           +N+   M +  L+ G GFL   A FEI +  + + +  SYA AI VG +NT  +A    I
Sbjct: 42  SNIAATMARIGLTPGFGFLERAANFEIGESTISFRAGDSYARAIAVGVLNTAKVAVLSCI 101

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT++G  +   RL+ + +++ + R  +EV RN P L+ +FF + ++   LP P  ++V 
Sbjct: 102 LATVLGVALALLRLAGHPVLSGLVRWSIEVVRNTPLLLQLFF-WIALAHALPPPRRAVVW 160

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              +FL NRG+  P++ +   + + + + +  I+L   A  L R         LPL  ++
Sbjct: 161 FDCVFLTNRGVYLPSVIIAEGSWMAI-TAIAAILLGWLAL-LWRSRKRGPLAPLPLGLVA 218

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              +     +V+ A  +++    P +  FN  GG++++PEF +L + L+   AA  AEIV
Sbjct: 219 ILAL----AVVIYASGFRISLHSPAVQGFNIQGGTSLTPEFAALLVGLTVKFAAIFAEIV 274

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+++V R Q +AA ALGL+  +  RLV+LPQA+R I P  TS YL+++K+SSLAVA+G
Sbjct: 275 RAGILSVRREQWDAARALGLSEFQIVRLVVLPQALRVITPLATSCYLDVIKDSSLAVAIG 334

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + DL+++  T  N TGQA+E +LI + +YL+L++ ++  MN  NA++A++  +
Sbjct: 335 YPDLMNITNTTANTTGQALETLLIVVALYLTLNLSVSAVMNVYNARVAMRGGR 387


>gi|103487894|ref|YP_617455.1| amino acid ABC transporter permease [Sphingopyxis alaskensis
           RB2256]
 gi|98977971|gb|ABF54122.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Sphingopyxis alaskensis RB2256]
          Length = 730

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 185/316 (58%), Gaps = 16/316 (5%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109
           +N+   N+  G GFL +RAGF I + ++ Y    SYA A+ VG +NT  ++  G+I +T+
Sbjct: 34  DNLADRNIRTGFGFLFDRAGFAIGETLIAYAPGDSYAAALAVGLLNTLLISALGIIFSTL 93

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +G  V   RLS+N L+A +  +Y+E+ RNIP L+ +F  Y ++L  LP P    V PF  
Sbjct: 94  LGLAVCMARLSSNWLLARLSGLYIELVRNIPLLLQMFVWYAALLFGLPGPGPGAVGPFD- 152

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            L+NRGL  P L++    +  +   ++   + L A R       +T  A   + +   L+
Sbjct: 153 -LDNRGLHLPALSLADPGRPVLLIAIVACAILLGAVRRG-AVRTRTALAFAGISLVPLLL 210

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           +G               D P  G+F  +GG + S EF++L  +LS Y +A++AEI R  +
Sbjct: 211 WG-------------GIDLPRAGRFGTVGGLSFSTEFLTLVTSLSVYASAYLAEIFRGAI 257

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVP GQ EAA ALGL+  +    +++PQA+R  IPP+TS +LN +KNSSL VA+G+ + 
Sbjct: 258 LAVPAGQSEAAKALGLSPAQTMGRIVIPQALRIAIPPMTSWHLNTIKNSSLGVAIGYPEF 317

Query: 350 VSVGGTIINQTGQAIE 365
           VSV  T+I+QTGQAIE
Sbjct: 318 VSVVDTVISQTGQAIE 333



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  +TAA++AE++R GL+AVP GQ EAA ALGLT  +A R +LLPQA++  +P L + 
Sbjct: 602 LALIFFTAAYMAEVIRGGLLAVPVGQAEAAHALGLTKWQARRHILLPQALKVSVPGLVNT 661

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            ++ +KN++L + VG  DL+ 
Sbjct: 662 SISEVKNTTLVLIVGVFDLLQ 682


>gi|297518685|ref|ZP_06937071.1| predicted amino-acid transporter subunit [Escherichia coli OP50]
          Length = 208

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 104/206 (50%), Positives = 141/206 (68%), Gaps = 1/206 (0%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+ + V+ IVLS+   R ++ +  KTG+      I+  LI GLP L        LH+D P
Sbjct: 2   FILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVP 61

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +  
Sbjct: 62  ALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPV 121

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIIL 368
             R V++PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I 
Sbjct: 122 TLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIA 181

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
           + M +YL +S+ I+L MN  N +IA+
Sbjct: 182 MTMSVYLIISLTISLLMNIYNRRIAI 207


>gi|312115907|ref|YP_004013503.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221036|gb|ADP72404.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 357

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/351 (41%), Positives = 206/351 (58%), Gaps = 22/351 (6%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           W V   + N+ +  +  G+GFLSE AGF + Q ++P+   S+Y  A +VG +NT  +A  
Sbjct: 26  WLVFTAWTNIGRLPVHFGLGFLSEPAGFSVLQTLIPFDEKSTYGRAFMVGLLNTLLVAAI 85

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
           G+  AT+IG  VG  RL+ N+L+  +   YVE+FRN+P L+++FF Y  VL  LP P  S
Sbjct: 86  GIALATVIGFSVGVARLAPNRLLRAVAAGYVELFRNLPLLLLLFFFYFGVLRQLPPPRQS 145

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             L  G+ LNNRGL  P    D     ++    L ++ +  A +         G      
Sbjct: 146 FELG-GVILNNRGLFLP----DPAGGGWLVLAALALLAAALALKSRWRIFAGVGA----- 195

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                       + L++     H   P     +  GG  + PEF++L  AL+ YTAA+IA
Sbjct: 196 -----------AVALVSALAMTHIVWPEARGLSVSGGLRLIPEFVALVAALAIYTAAYIA 244

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ +V RGQ +AA ALGLT  +A R V+LPQA+R ++PPLTSQYLNL KNSSLAV
Sbjct: 245 EIVRAGIQSVARGQGQAAAALGLTGLQAMRFVVLPQALRLVVPPLTSQYLNLTKNSSLAV 304

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A+ + DLVS+  GT + QTGQA+EI+ + M +YL+LS+  A  +N  NA++
Sbjct: 305 AIAYPDLVSIFAGTTLAQTGQAVEIMALTMGVYLTLSLATAALLNWQNARV 355


>gi|152998089|ref|YP_001342924.1| binding-protein-dependent transporter inner membrane component
           [Marinomonas sp. MWYL1]
 gi|150839013|gb|ABR72989.1| binding-protein-dependent transport systems inner membrane
           component [Marinomonas sp. MWYL1]
          Length = 401

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 14/385 (3%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
            FLY+ +V +  +Q+I   ++     +   N   NM  + L+ G  FL +RAG++I   +
Sbjct: 27  SFLYNRKVRDTLIQLIFFAVICFGITYLALNAATNMRDAGLTSGFDFLFQRAGYDISYSL 86

Query: 77  VPYT-SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           + Y    S++  A   G VNT   A   ++  T++   +   RLS N L++ +    VE 
Sbjct: 87  IHYDPKTSTHLMAWAAGMVNTIAFAVVAILLTTVMALCLAVMRLSQNFLLSKVSLCLVEY 146

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG--MFLNNRGLSFPTLTMDTNAKIFVFS 193
            RN+P LV I   Y   LS++ +P       FG   FL+NRGLS P++  +      +  
Sbjct: 147 VRNVPILVHISVWYT--LSLM-LPSVRQAFNFGDVSFLSNRGLSIPSVEWNYGLLASLVF 203

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             L  VL  F  +        TG+ +  + + T ++  L +LV   +   + F  P L  
Sbjct: 204 AALWTVLCFFVKKRV----STTGRRIISVLLMTIVLAVLASLVFTPV---ISFTAPKLVG 256

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF  G T+ PEF+ L IA+S Y+AA  +E++R  ++A+ +GQMEA +ALG+        
Sbjct: 257 FNFKHGWTLPPEFIMLIIAVSTYSAAHGSEVIRGSILAISKGQMEAGLALGVRPNIVMNK 316

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQAIEIILIWMF 372
           V++PQA+ SIIPP+TS Y+N+LK ++L   VGF D++ ++GG+ +N TGQAIE I+I M 
Sbjct: 317 VIIPQALHSIIPPMTSIYINVLKAAALGSVVGFMDIMGTMGGSSLNITGQAIECIVIVMV 376

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
            Y  L++++A  M R N  + LK +
Sbjct: 377 SYGILNLILAAIMGRFNKAMQLKGR 401


>gi|331670095|ref|ZP_08370940.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA271]
 gi|331063008|gb|EGI34922.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA271]
          Length = 203

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/203 (50%), Positives = 139/203 (68%), Gaps = 1/203 (0%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + IVLS+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FN
Sbjct: 1   MAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 60

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V+
Sbjct: 61  FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 120

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           +PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +Y
Sbjct: 121 IPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 180

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L +S+ I+L MN  N +IA+ E+
Sbjct: 181 LIISLTISLLMNIYNRRIAIVER 203


>gi|313648622|gb|EFS13063.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella flexneri 2a str. 2457T]
          Length = 203

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 102/203 (50%), Positives = 138/203 (67%), Gaps = 1/203 (0%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + IVLS+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FN
Sbjct: 1   MAIVLSVGLFRFNKTYQIKTGQLRRSWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFN 60

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V+
Sbjct: 61  FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 120

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           +PQA+R IIPPLTSQYLN++KNSSLA  +G+ D+VS+  GT++NQTGQAIE I + M +Y
Sbjct: 121 IPQALRVIIPPLTSQYLNIVKNSSLAAVIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 180

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L +S+ I+L MN  N +IA+ E+
Sbjct: 181 LIISLTISLLMNIYNRRIAIVER 203


>gi|323165233|gb|EFZ51023.1| general L-amino acid transport system permease protein aapQ
           [Shigella sonnei 53G]
          Length = 307

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/278 (38%), Positives = 158/278 (56%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++
Sbjct: 145 FAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNK 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +  KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L
Sbjct: 205 TYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAAL 264

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +
Sbjct: 265 TLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPN 302


>gi|87302593|ref|ZP_01085410.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus sp. WH 5701]
 gi|87282937|gb|EAQ74894.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus sp. WH 5701]
          Length = 329

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 182/352 (51%), Gaps = 60/352 (17%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
            N+  N+  + L L   +LS+ A F++ + ++P+ +   Y  A+LVG VN+  +   G++
Sbjct: 38  GNLVRNLTAAGLLLSWRWLSQPASFDVAESLIPFDASMPYWRALLVGLVNSLRVILVGLV 97

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT++GT +G    S N L+  + RVYVEV RNIP L+ + F Y  V   LP    +  L
Sbjct: 98  GATLLGTAMGMASFSGNGLLRRLARVYVEVIRNIPLLLQLLFWYFVVFLALPNGTAAFQL 157

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           P                              GIVLS            K+G     LY++
Sbjct: 158 P------------------------------GIVLS------------KSG-----LYLA 170

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F                  +  P L    +     +S EF +L   L  YT AF+AE+V
Sbjct: 171 WF-------------AQGFSWQGPELVNGVWRAPLRLSVEFTALLTGLITYTGAFVAEVV 217

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ +VP+GQ EAA +LGL    + R V+LPQA+R I+P L SQY++L KNSSLAVAVG
Sbjct: 218 RGGIASVPKGQWEAATSLGLHWSASMRSVVLPQALRVIVPGLNSQYISLAKNSSLAVAVG 277

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + DL SV  T +NQTG+A+E+ L+ +  YL + ++I+  MN +N  + ++E+
Sbjct: 278 YVDLYSVSETTLNQTGRALEVFLLLLGSYLIIDLLISAVMNGVNQLVQIRER 329


>gi|319782290|ref|YP_004141766.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168178|gb|ADV11716.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 387

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 210/386 (54%), Gaps = 6/386 (1%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           +  L + +V N  +Q++    +  + L  +     N+    ++ G  FL +  G++++  
Sbjct: 2   VSLLRNQKVRNALLQVLYVGSIAAMVLAGIVIARRNLADQGITSGFDFLFKSTGWDVNFS 61

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++P T++  Y    L+G +NT +L   G+I ATI+GT+VG  R S+N L   + R YV++
Sbjct: 62  LLPATANDPYWWYFLIGIINTLFLGSVGLILATIVGTIVGLARTSSNDLARLLGRTYVDI 121

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRNIP ++ +FF Y ++++ LP P  S    +G  L +RGL  P   + + A       V
Sbjct: 122 FRNIPLILQVFFWY-AIITHLPTP-RSAHEAWGFLLTSRGLYIPFPNVGSAAFAAATVAV 179

Query: 196 LGIV-LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI--ALKYQLHFDKPVLG 252
           +  + L  +  R S    +  G+   + + +        T++L    L      D P L 
Sbjct: 180 IAAIVLPAWLGRTS-LLAQPIGQRRTIQFAAAAAALACATIILALGRLPDTPLLDFPALQ 238

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             N  GG  + PEF +L IA++ Y  ++IAEIVR G  +V  GQ+EAA++LGL+  +   
Sbjct: 239 GLNLRGGLRIPPEFATLAIAIAIYGGSYIAEIVRGGFKSVGTGQVEAALSLGLSPWRVFT 298

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV LP A+R+++P L +QY+ L+K +++ +AVGF D   +    IN +GQ +E I I M 
Sbjct: 299 LVRLPLALRAMLPILANQYVWLMKATTMGIAVGFTDFFMIVALTINHSGQTLEAIGILMA 358

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
            +L++++ +A   NR+N  IALK  +
Sbjct: 359 GFLAINLSLAAVFNRINKAIALKGNQ 384


>gi|218677586|ref|ZP_03525483.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 894]
          Length = 261

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/240 (42%), Positives = 143/240 (59%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD  +  I  QI+  +LL     W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPTIRGIFFQILTIVLLVAFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A+LVGF+NT  +A +G+I ATIIG ++G GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALLVGFLNTILIAVTGIISATIIGFIIGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP         +   
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGSYLNNRGLSFPKPIFGEGFWLVGI 201

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + V+ I+      R +      TGK    ++ S  L+ GLP +  +     L FD P+ G
Sbjct: 202 AVVIAIIAVFATARWAHRRQAATGKPFHTIWASIGLLIGLPLVAFLLAGAPLSFDYPIAG 261


>gi|209549222|ref|YP_002281139.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209534978|gb|ACI54913.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 779

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 202/372 (54%), Gaps = 22/372 (5%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG------- 75
           R+ + ++Q+ +  L+ V+       V   + +  +     FL+  AGF+I +G       
Sbjct: 26  RIRHEAIQLGIVGLVVVLLGILAYAVKAGLSEKGIRFSFSFLANTAGFDISEGWTLTSGE 85

Query: 76  -IVP----YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            +VP    ++SD S A+A + G  NT  +A   +  +TI+GTL+G GRLS N +V  +C 
Sbjct: 86  GVVPGLSQFSSDMSVASAFVTGIFNTAKVALLAIALSTILGTLLGVGRLSTNWVVRNLCF 145

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             VE  RN P L+ + F Y +V+   P    +  L  G+ ++ +G+  PTL         
Sbjct: 146 WIVEFVRNTPLLIQLVFWYFAVVLRFPPMASAAKLYGGLIVSQQGIYVPTLAWSGG---- 201

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +  L +V + + + L   F    G     + ++  + FGL    LIA    +  D PV
Sbjct: 202 VSTLSLILVTATWVSVLGAVFDPIRGMRRICIAVAV-VCFGL----LIATG-GMTVDFPV 255

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             +F   GG+++SPE  +L +A+   +A+FIAEIVR  + A+P+ Q EAA +LG + R  
Sbjct: 256 ANKFKASGGTSISPEMAALLLAVVVNSASFIAEIVRGAIDALPKSQWEAAGSLGFSRRDT 315

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQ  R ++P   +QY++L KN++L +AVG+ DL ++ GTI NQTG ++E I+I 
Sbjct: 316 VNDIVLPQVFRVVLPSFGNQYISLTKNTALGIAVGYPDLFNIYGTIANQTGHSLEGIIIV 375

Query: 371 MFIYLSLSIMIA 382
           M  YL LS +I+
Sbjct: 376 MASYLILSWIIS 387



 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 6/113 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + AA++AE VRSGL AVPR Q EAA +LG++     R  +LPQA+R ++ PL   
Sbjct: 650 IGFTIFYAAYVAEYVRSGLQAVPRAQTEAARSLGMSEFDINRSTVLPQALRVVVAPLVGN 709

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII------NQTGQAIEIILIWMFIYLSL 377
            L++  ++ L   +G  D +  G  I+      ++T + +  +LI  F+  SL
Sbjct: 710 VLDIFNSAPLVFIIGLTDFLRAGQMILANPQYGDRTFEVLSFLLITYFLVGSL 762


>gi|254430534|ref|ZP_05044237.1| ABC-type permease for basic amino acids and glutamine [Cyanobium
           sp. PCC 7001]
 gi|197624987|gb|EDY37546.1| ABC-type permease for basic amino acids and glutamine [Cyanobium
           sp. PCC 7001]
          Length = 331

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/352 (34%), Positives = 177/352 (50%), Gaps = 60/352 (17%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
            N+  N+  + L L   +L + AGF I +  +P+ +   Y  A+L G  NT      G+I
Sbjct: 40  GNLIRNLTAAGLLLTWRWLGQPAGFNIGESTIPFDAALPYWRALLAGLANTLRAVVCGLI 99

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT++GT+ G    S+N L+  + R YVEV RNIP L+ + F Y  V   LP    +   
Sbjct: 100 GATLLGTMAGMANFSSNGLLRGLVRGYVEVVRNIPLLLQLVFWYFVVFLALPNGAAA--- 156

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                     L  P LT+   + +++  F  G               E  G         
Sbjct: 157 ----------LQLPGLTL-AKSGLYLAGFGPG--------------WEWAG--------- 182

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                  PTLV    +  L                  S EF +L   L  Y+ A+IAE+V
Sbjct: 183 -------PTLVNGVWQAPLRL----------------SVEFGALLCGLVVYSGAYIAEVV 219

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AVP GQ EAA +LGL    + R V+LPQA+R I+P L +QY++L KNSSLAVAVG
Sbjct: 220 RAGIAAVPEGQWEAASSLGLGWLASVRHVVLPQALRVIVPGLNTQYISLAKNSSLAVAVG 279

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + DL +V  T +NQTG+A+E++++ +  YL L ++I+  MN LN  + ++E+
Sbjct: 280 YPDLYAVAETTLNQTGRAVEMVILLLAAYLVLDLLISAVMNGLNRLVQIRER 331


>gi|209547000|ref|YP_002278918.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538244|gb|ACI58178.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 402

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 194/366 (53%), Gaps = 27/366 (7%)

Query: 48  VYNNMEKSNLSLGIGFLSERAGFEIDQG-----------IVPYTSDSSYATAILVGFVNT 96
           +  ++ +  ++   G+L   + F + +G           +V  TSDS+    +  G  NT
Sbjct: 49  IQQSLAERGIAFSFGYLFRPSQFNVSEGFAAVWDGWWPALVQVTSDSTNLQMLTAGLFNT 108

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV-VIFFLYKSVLSV 155
             +A   ++ +T+IG + G  RLS N L+  I    VE  RN P L+ V+F+ +   L V
Sbjct: 109 IKVALLAILFSTVIGVIFGVARLSTNWLIRQIAFAIVEFVRNTPLLIQVVFWYFAFFLRV 168

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTM-DTNAKIFVFSFVLGIVLSLFAT--RLSRHFH 212
            P+ D + V  + +F    GL  P L + D      V    L I L + A   RLS    
Sbjct: 169 PPVTDAANVEKWFVF-GQSGLFLPLLQISDGVDSGTVVLIALAIALMILACWPRLS---- 223

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
              G+   L     F    +      A  +++    P++G+F   GG  +SPE  ++ IA
Sbjct: 224 --LGRRWVL-----FGAGAVAAAAGYATGFRMDLALPLVGRFGATGGLQLSPEMSAILIA 276

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +   +AA+IAEIVR  +  +P+GQ EAA A+GL+ +   R V+LPQ  R I+P L ++Y+
Sbjct: 277 IVVNSAAYIAEIVRGAIEGLPKGQWEAAAAVGLSRKDTIRDVILPQVFRIILPSLANRYI 336

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L K++SL +A+GF DL +V GT+ NQTG ++E +LI M IYL LS +I+ F+N LN ++
Sbjct: 337 SLTKDTSLGIAIGFPDLFNVSGTVANQTGHSLETVLIVMAIYLMLSWLISAFINFLNGRV 396

Query: 393 ALKEKK 398
            L+  +
Sbjct: 397 ILEGAR 402


>gi|310816975|ref|YP_003964939.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Ketogulonicigenium vulgare Y25]
 gi|308755710|gb|ADO43639.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Ketogulonicigenium vulgare Y25]
          Length = 478

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 90/179 (50%), Positives = 122/179 (68%), Gaps = 6/179 (3%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P+++ +    FG P     A    +  D P LG FNF GG  V    ++L++ALS YT A
Sbjct: 305 PIIWAALTTPFGAP-----AFNPSIALDIPALGGFNFTGGFNVRASLVALWLALSLYTGA 359

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAEIVRSG++AVP+GQ EAA ALG+   ++  +V+LPQAMR I+PP+ SQYLNL KNSS
Sbjct: 360 FIAEIVRSGIMAVPKGQSEAAAALGMPAGRSMTMVILPQAMRVIVPPMISQYLNLTKNSS 419

Query: 340 LAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LA+AVG+ D+  ++GG  INQTG+ +E +L+    YL LS+MIA   N  NA++ LKE+
Sbjct: 420 LAIAVGYMDVRATLGGITINQTGRELEGMLLMGMFYLVLSLMIAGVGNWFNARVKLKER 478



 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 118/226 (52%), Gaps = 6/226 (2%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
           + L D R  +I++QII  +L  + F W V N   N+ +   +    FL +R+ ++I+Q +
Sbjct: 16  QLLSDTRYRSITIQIIALILFALGFWWLVGNTIENLSRLGKTFSFSFLGQRSNYDINQRL 75

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y S S++  A +VG +NT  +A  G + AT+IG + G  RLS N +VA +  VY+E F
Sbjct: 76  ISYDSTSTHGRAAVVGILNTLLVAAMGCVLATVIGVMAGVLRLSKNWIVARLMAVYIEGF 135

Query: 137 RNIPPLVVIFFLYKSVLSVLPIP------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           RN+P L+ I  +Y  V    P P      D S++L   + + NRG+  P       A + 
Sbjct: 136 RNVPLLLWILLIYAMVSESTPAPRAFGSGDASMLLWDSIAITNRGIYIPGPVFTPGAWLV 195

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           + +F++G+ ++      SR     TG      +++  ++ G+  LV
Sbjct: 196 LAAFIVGLGVAWQQWSASRKRQIATGTPPMSRWLAAGIVLGITGLV 241


>gi|317970284|ref|ZP_07971674.1| polar amino acid ABC transporter, inner membrane subunit
           [Synechococcus sp. CB0205]
          Length = 318

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 183/352 (51%), Gaps = 71/352 (20%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N+  N+  + L L   ++   AGF+I    +P+++D  Y  A+L G VNT  +   G+I 
Sbjct: 37  NLVQNLAAAGLLLTWRWIGNPAGFDIAGSWLPFSADQPYWWALLAGLVNTLRVVVIGLIG 96

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV-VIFFLYKSVLSVLPIPDHSIVL 165
           A+I+GT VG    S N L+  + RVYVE+ RNIP L+ ++F+ +   LS          L
Sbjct: 97  ASIVGTAVGVASFSGNALLRGLARVYVELIRNIPLLLQLVFWYFVVFLS----------L 146

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           P G     + + +P                 G+VL+                        
Sbjct: 147 PGGA----QAIQWP-----------------GVVLA-----------------------Q 162

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           + L  G+P LV         +  P+           +S EF +L   L  Y +AFI+E+V
Sbjct: 163 SGLYLGMPELV------NGVWQAPI----------RLSVEFAALLTGLIVYISAFISEVV 206

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ +VP+GQ EAA ALG +  +  R V+LPQA+  I+P L +QY++L K+SSLA+A G
Sbjct: 207 RGGIASVPKGQWEAARALGFSPLQTLRRVVLPQALPVIVPGLNNQYISLAKSSSLAIACG 266

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +ADL SV  T +NQTG+A+E+++I +  YL++ ++I+  MN LN  + L+ +
Sbjct: 267 YADLYSVAETTLNQTGRAVEVMVILLGAYLAMDLVISALMNALNRAVQLRSR 318


>gi|190891653|ref|YP_001978195.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696932|gb|ACE91017.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 404

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 193/366 (52%), Gaps = 23/366 (6%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG--------- 75
           H + +Q+ +  L+ V+       V   + +  +     FL+  AGF+I +G         
Sbjct: 29  HEV-IQLGIVALVVVLLGMLAYAVKAGLAEKGIRFSFSFLANTAGFDISEGWTLTSGEGF 87

Query: 76  ---IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
              +  ++SD S A+A + G  NT  +A   +I +TI+GT++G GRLS N +V  +C   
Sbjct: 88  VPNLAQFSSDMSIASAFVTGIFNTAKIALLAIILSTILGTMLGVGRLSTNWVVRNLCFWI 147

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VE  RN P L+ + F Y +V+   P    +  L  G+ ++ +G+  PTL+          
Sbjct: 148 VEFVRNTPLLIQLVFWYFAVVLRFPPMASAAKLYGGLVVSQQGIYIPTLSWTGGVSTLSL 207

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             V    +SL    L   F    G A  +   +  +  GL    L+A   ++  + PV  
Sbjct: 208 ILVTATGVSL----LGAVFDPVRG-ARRICAAAAVVCLGL----LVATG-EMTVNFPVAN 257

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F   GG+++SPE  +L +A+   +A+FIAE VR  + A+P+ Q EAA +LGL+ R    
Sbjct: 258 KFKASGGTSISPEMAALLLAIVVNSASFIAETVRGAIDALPKAQWEAAGSLGLSRRDTVN 317

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQ  R ++P   +QY++L KN++L +AVG+ DL ++ GTI NQTG ++E I+I M 
Sbjct: 318 DIILPQVFRVVLPSFGNQYISLSKNTALGIAVGYPDLFNIYGTIANQTGHSLEGIIIVMA 377

Query: 373 IYLSLS 378
            YL LS
Sbjct: 378 SYLILS 383


>gi|85716215|ref|ZP_01047189.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           sp. Nb-311A]
 gi|85696887|gb|EAQ34771.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           sp. Nb-311A]
          Length = 298

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/277 (37%), Positives = 154/277 (55%), Gaps = 2/277 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVH--NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
            +RK   ++F R++     R     +++Q +  ++LT      V N   N+E  +++ G+
Sbjct: 22  KSRKPPLQFFLRLRRALGGRAGWGGLALQALFIVVLTWAGYEIVANAKGNLEAQHIASGL 81

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           GF+S  AGF + Q ++PY+   SY    LVG VNT  +A  G+  AT+IG LV  GRLS 
Sbjct: 82  GFMSNTAGFGVSQTLLPYSETDSYTRVFLVGLVNTLVVAAVGIFFATVIGFLVALGRLSP 141

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           N L++ I   YVE+ RN+P L  I F Y +VLS LP P  SI +  G+FL+NRGL  P  
Sbjct: 142 NWLISRIAGGYVELVRNLPLLFQILFWYLAVLSTLPSPKQSISVFDGIFLSNRGLVIPKP 201

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
                   F+ + V+ I+  +     SR    ++G+AL +   +  L+ GLP   ++   
Sbjct: 202 VGYEGLIAFIMAVVVAIIGCMMLRNRSRRGLFRSGRALVVWPYALGLLIGLPAAAMVIFG 261

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               F+ PVL  FNF+GG+ + PEF++L IALS YTA
Sbjct: 262 VPFTFEMPVLKGFNFVGGAHLIPEFVALAIALSTYTA 298


>gi|150397300|ref|YP_001327767.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150028815|gb|ABR60932.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 402

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 193/367 (52%), Gaps = 32/367 (8%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG------------IVPY 79
           ++A  +T++ L+ +  V   + +  +     FL + AGF++ +G               +
Sbjct: 36  VIAAAITLVVLFALA-VKEGLARHGIRFSFSFLWDAAGFDLSEGKTFVFDGTFWLAFTEF 94

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV----YVEV 135
           TS+ S A A   G VNT  +A   ++ +T++G L+G  RLS N    W+ R      VE 
Sbjct: 95  TSERSIAQAFAAGIVNTTKVAVLAIVLSTMLGVLLGVSRLSTN----WVARSLSFWCVEF 150

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN P L+ + F Y +V+   P P  +    +G+ ++ +GL FP L           +  
Sbjct: 151 VRNTPLLIQLVFWYFAVILHFP-PIAAAAEFYGVVISQQGLFFPALVWKGEGSPVAIAMA 209

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
               +++      +H      + +  + +   ++  LP L+L+    +L F  PV  +F 
Sbjct: 210 TACWVAILGLVFDKH------RLVRRVCMGAIVV--LPCLMLLTGIVELDF--PVASKFR 259

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             GG+ +SPE  +L +A+   +A++IAEIVR  + A+P+GQ EAA +LGL+ R     ++
Sbjct: 260 AKGGTGMSPEMAALLLAIVVNSASYIAEIVRGAIDALPKGQWEAAASLGLSRRDTVHDII 319

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ  R ++P   +QY++L KN++L +AVG+ +L ++ GTI NQTG ++E ILI M  YL
Sbjct: 320 LPQVFRVVLPSFGNQYISLTKNTALGIAVGYPELFNIYGTIANQTGHSLEGILIVMASYL 379

Query: 376 SLSIMIA 382
            LS  I+
Sbjct: 380 ILSWAIS 386


>gi|260757722|ref|ZP_05870070.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260668040|gb|EEX54980.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
          Length = 289

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 129/231 (55%), Gaps = 8/231 (3%)

Query: 3   KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54
           +  RK +  YF   +         LYD R   I  Q+++   +     W V N   N+++
Sbjct: 57  ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 116

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           +N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LV
Sbjct: 117 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 176

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNR
Sbjct: 177 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 236

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           G   P+      A     + ++GI+ S    R ++     TG+    + +S
Sbjct: 237 GFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVS 287


>gi|260545548|ref|ZP_05821289.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260096955|gb|EEW80830.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
          Length = 284

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 129/231 (55%), Gaps = 8/231 (3%)

Query: 3   KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54
           +  RK +  YF   +         LYD R   I  Q+++   +     W V N   N+++
Sbjct: 52  ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           +N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LV
Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNR
Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           G   P+      A     + ++GI+ S    R ++     TG+    + +S
Sbjct: 232 GFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVS 282


>gi|189023945|ref|YP_001934713.1| General L-amino acid transport system permease protein AAPQ
           [Brucella abortus S19]
 gi|254689007|ref|ZP_05152261.1| general L-amino acid transport system permease protein aapQ
           [Brucella abortus bv. 6 str. 870]
 gi|254697142|ref|ZP_05158970.1| general L-amino acid transport system permease protein aapQ
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730038|ref|ZP_05188616.1| general L-amino acid transport system permease protein aapQ
           [Brucella abortus bv. 4 str. 292]
 gi|256257257|ref|ZP_05462793.1| general L-amino acid transport system permease protein aapQ
           [Brucella abortus bv. 9 str. C68]
 gi|260883530|ref|ZP_05895144.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|189019517|gb|ACD72239.1| General L-amino acid transport system permease protein AAPQ
           [Brucella abortus S19]
 gi|260873058|gb|EEX80127.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
          Length = 227

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/207 (42%), Positives = 122/207 (58%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF+I Q ++ 
Sbjct: 19  LYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGFDISQTLIQ 78

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC VYVEVFRN
Sbjct: 79  YNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVFRN 138

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A     + ++GI
Sbjct: 139 IPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLIGI 198

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYIS 225
           + S    R ++     TG+    + +S
Sbjct: 199 LASFAVARWAKRRQMATGQPFHTIRVS 225


>gi|119897621|ref|YP_932834.1| putative amino acid permease [Azoarcus sp. BH72]
 gi|119670034|emb|CAL93947.1| putative amino acid permease [Azoarcus sp. BH72]
          Length = 339

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/329 (34%), Positives = 165/329 (50%), Gaps = 66/329 (20%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATI 109
            +M +  +  G  FL + AGF I +G+  +    SY  A  VG  NT  +A    + A  
Sbjct: 51  GHMRERGIHSGFDFLLQSAGFWISEGVPAFDPAESYLKAFGVGLANTLRVALPATLAALA 110

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           IG LVG GR++ N L+   C  YVE  RNI PL++                         
Sbjct: 111 IGFLVGLGRIAHNPLLRACCTAYVETLRNI-PLLL------------------------- 144

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH---EKTGKALPLLYIST 226
                             ++  + FVL  VL   A  +    H    K+G ALP      
Sbjct: 145 ------------------QLLAWYFVLTAVLPPAAQAIELLPHVYLGKSGLALPW----- 181

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                 P    I L        P  G F+  GG+ +SPE+++L+I L+ YTA++IAE VR
Sbjct: 182 ------PGADGIEL--------PERGGFSISGGAQLSPEYLALFIGLATYTASYIAESVR 227

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AV  GQ +AA+ALGL   +  R + LPQA+ +I+PPL +  LN++KNSSLAVA+G+
Sbjct: 228 AGVQAVSAGQAQAAVALGLRRGQILRHITLPQALPAIVPPLANHALNVIKNSSLAVAIGY 287

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            DLVS+  T +NQTG+A+E I I + +Y+
Sbjct: 288 PDLVSIANTTLNQTGRAVECIAIVVAVYV 316


>gi|239815921|ref|YP_002944831.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802498|gb|ACS19565.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 332

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/157 (50%), Positives = 114/157 (72%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +  HFD P  G F   GG+ +SPE++++   LS Y+AAF+AEIVR+G+++VP+GQ+ A  
Sbjct: 176 WPTHFDWPERGDFGVSGGAALSPEYVTIVAGLSFYSAAFVAEIVRAGILSVPQGQVLAGQ 235

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL   +  R+V+LPQA+R I+P LT+Q L+L+KNSSLAVAVG+ +LVSV  T I   G
Sbjct: 236 ALGLAPVQQLRIVILPQALRVIVPSLTNQLLSLVKNSSLAVAVGYPELVSVANTTIGSNG 295

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +A E I I M +YL LS++I+  MNR NA++AL+  +
Sbjct: 296 RAFECIAIIMAVYLLLSLLISFGMNRYNARVALRGWR 332



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 74/134 (55%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           N+    +    +  G  FL+E AGF I +G + + +   +  A L G VNT   +    I
Sbjct: 33  NHALEVLRARGVRSGFDFLAEPAGFSISEGWLGFEASQPFWRAFLAGLVNTVRASVPAAI 92

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            + ++GTL+G GRL+ + L+  IC  YVE+ RN+P LV +  L  ++ ++LP P   + L
Sbjct: 93  FSVVLGTLIGIGRLAPHVLLRGICTAYVELLRNVPLLVQLLMLAFAIANLLPDPTEPVRL 152

Query: 166 PFGMFLNNRGLSFP 179
             G++L+  GLS P
Sbjct: 153 LPGVWLSKGGLSVP 166


>gi|218672486|ref|ZP_03522155.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli GR56]
          Length = 188

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/165 (50%), Positives = 116/165 (70%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD ++  I  Q++  +LL  +  W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPKIRGIFFQVLTIVLLVTLIWWIAHNTAVNLARANIASGFGFLNSRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A+LVG +NT  +A +G+I ATIIG ++G GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALLVGLLNTILIAVTGIITATIIGFIIGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           VEVFRNIPPL+VIFF Y  VL++LP    S+ LPFG FLNNRGLS
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAILPNARESLQLPFGSFLNNRGLS 186


>gi|298491368|ref|YP_003721545.1| polar amino acid ABC transporter inner membrane subunit ['Nostoc
           azollae' 0708]
 gi|298233286|gb|ADI64422.1| polar amino acid ABC transporter, inner membrane subunit ['Nostoc
           azollae' 0708]
          Length = 308

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/139 (54%), Positives = 104/139 (74%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T SPEF +L + L+ YT AFIAEIVR G+ ++P+GQ EA ++LGL      RLV+ PQ
Sbjct: 170 GFTFSPEFSTLLLGLTFYTGAFIAEIVRGGIKSLPKGQWEAGLSLGLKPTLLIRLVIFPQ 229

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R IIPPLTSQYLNL KNSSLA+A+G+ D+  V  T  NQTG+A+E++++ M  YL+LS
Sbjct: 230 ALRVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGKAVEVMILIMLTYLTLS 289

Query: 379 IMIALFMNRLNAKIALKEK 397
           ++I+L MN LN  + +KE+
Sbjct: 290 LIISLMMNLLNRSVQIKER 308



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 4/164 (2%)

Query: 21  DMRVHNISVQIILALLLTVI--FLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           D R   I+VQ I  +L+  I   LW   N+  N+++  +  G  FL + A F+I + +V 
Sbjct: 11  DYRFWRIAVQCIAVILVIAIVAILWM--NLNRNLQQLGIKFGFDFLQQEASFDIGETLVN 68

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y  A+ VG +N+  +A +G++  TI+G   G   L  N LV  I  VYVEVFRN
Sbjct: 69  YKPTDTYILALWVGLINSLRVAIAGILLTTIVGITAGIASLFDNWLVRNISLVYVEVFRN 128

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            P L+ + F Y  V  V P  ++   +   + L+  G+  P  T
Sbjct: 129 TPLLLQLLFWYFGVFLVFPKVENKFYVWGLIHLSQNGIELPGFT 172


>gi|261317401|ref|ZP_05956598.1| amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261296624|gb|EEY00121.1| amino acid ABC transporter [Brucella pinnipedialis B2/94]
          Length = 251

 Score =  155 bits (393), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 84/186 (45%), Positives = 112/186 (60%), Gaps = 8/186 (4%)

Query: 3   KNARKTVTRYFSRMK--------FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEK 54
           +  RK +  YF   +         LYD R   I  Q+++   +     W V N   N+++
Sbjct: 52  ERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQR 111

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           +N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LV
Sbjct: 112 ANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLV 171

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNR
Sbjct: 172 GIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNR 231

Query: 175 GLSFPT 180
           G   P+
Sbjct: 232 GFFMPS 237


>gi|319793875|ref|YP_004155515.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315596338|gb|ADU37404.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 332

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/157 (49%), Positives = 114/157 (72%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +  HF+ P  G F   GG+ +SPE++++   LS Y+AAF+AEIVR+G+++V +GQ+ A  
Sbjct: 176 WPTHFEWPERGDFGVSGGAALSPEYVTIVAGLSFYSAAFVAEIVRAGILSVSQGQVLAGQ 235

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL+  +  R+V+LPQA+R I+P LT+Q L+L+KNSSLAVAVG+ +LVSV  T I   G
Sbjct: 236 ALGLSSVQQLRIVILPQALRVIVPSLTNQLLSLVKNSSLAVAVGYPELVSVANTTIGSNG 295

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +A E I I M +YL LS++I+  MNR NA++AL+  +
Sbjct: 296 RAFECIAIIMAVYLLLSLVISFGMNRYNARVALRGWR 332



 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 84/152 (55%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87
           +VQ +L L +     W V++  + +    +  G  FL+E AGF I +G + + +   +  
Sbjct: 15  TVQALLVLAVVAGAFWVVHHALDVLRARGVRSGFDFLTEPAGFSISEGWLDFDASQPFWR 74

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G VNT   A    I + ++GTL+G GRL+ + L+  IC  YVE+ RN+P LV +  
Sbjct: 75  AFLAGLVNTVRAAVPAAIFSVVLGTLIGIGRLAPHVLMRGICTAYVELLRNVPLLVQLLM 134

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           L  ++ ++LP P   + L  G++L+  GLS P
Sbjct: 135 LAFAMANLLPDPTEPVRLLPGVWLSKGGLSVP 166


>gi|295689852|ref|YP_003593545.1| hypothetical protein Cseg_2472 [Caulobacter segnis ATCC 21756]
 gi|295431755|gb|ADG10927.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 378

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/350 (36%), Positives = 188/350 (53%), Gaps = 14/350 (4%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
            N   N+  S L+ G  FL   AGF+I +  + Y+   S A  +LVG +NT  +   G  
Sbjct: 36  RNGAANLRASGLASGFDFLGRAAGFDIAETPIAYSPRDSNAKVLLVGALNTLKVTGLGAT 95

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A+++G   G    + +  V  + + YVE+FRNI PL V+  +  S+L++ P P  ++ L
Sbjct: 96  LASLLGLAFGVALRARSGPVRILAQGYVELFRNI-PLPVLLLVLYSLLAMAPPPRAALDL 154

Query: 166 PFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
            FG+ F++NRGL  P L         +    L +   +   R  R    +  + L     
Sbjct: 155 -FGLGFVSNRGLYLPRLDWRWGGGGALAGAALALAALVAIWR--RAPSRRAAQVL----- 206

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            +F   G   L L+     L    P    F F+GG  VSP  ++L   L  YT  +IAE+
Sbjct: 207 -SFGWLGFCGLGLVLSVSGLEV--PRAQGFGFVGGQVVSPPLLALVGGLGLYTGGYIAEV 263

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L A+  GQ EAA ALGL+  +   L+ LPQA+R   PPL SQYLNL KN+SLA+ V
Sbjct: 264 VRGALAAIAPGQAEAAQALGLSPIQTLMLITLPQALRVAAPPLASQYLNLAKNASLAIIV 323

Query: 345 GFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G+ DLV+ +GGT++NQTGQAIE + + +  YL+LS+ I+  +N   A+ A
Sbjct: 324 GYPDLVALLGGTVLNQTGQAIETLGLILVFYLALSLSISGLINLWAARQA 373


>gi|149925440|ref|ZP_01913704.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Limnobacter sp. MED105]
 gi|149825557|gb|EDM84765.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Limnobacter sp. MED105]
          Length = 275

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 108/146 (73%)

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + PV G+F+  GG  +SPE++++ +AL  YTAAF+AEIVR+G+ AV  G  + A+ALGL+
Sbjct: 125 EAPVRGRFSIEGGWVLSPEYLAVLLALVVYTAAFVAEIVRAGVQAVRPGMRQGALALGLS 184

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + + TR V+LP A+R ++P L++QYLNLLKN+SL VAVG+ +LVSV  T INQ+G+A+E 
Sbjct: 185 NAQTTRYVVLPLALRVVVPSLSNQYLNLLKNASLGVAVGYPELVSVANTAINQSGKAVEC 244

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +LI +  Y  LS + A  MN LN ++
Sbjct: 245 VLIILVTYALLSAVAAGLMNALNTRV 270



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 71/120 (59%)

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FLS+ AGF + +G +     S Y   +L G +NT  +    ++ +T++G L+G G+L+ +
Sbjct: 5   FLSDPAGFGLSEGWLQVAFSSPYWQILLAGLLNTLKVGLPALLISTLLGLLIGLGQLAHH 64

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L+  +C+ Y+ +FRN+P L+ +  +Y ++   LPI   +  +   +FL+  GL+FP+ +
Sbjct: 65  PLLKGLCKGYINLFRNVPLLLQLLAIYFAITQFLPIASQAWSVGDSVFLSKSGLAFPSFS 124


>gi|254422592|ref|ZP_05036310.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196190081|gb|EDX85045.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 476

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 71/140 (50%), Positives = 104/140 (74%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG T+S  +++    L+ YT AFIAEIVR+G+ +VPRGQ EAA ++GLT+ KA RLV+ P
Sbjct: 337 GGLTMSVNYVASVTGLTFYTGAFIAEIVRAGIQSVPRGQWEAARSVGLTNDKAMRLVVFP 396

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q++R ++PPL S++ NL KNSSLA AVG+ +L ++  T  NQTG+ IE+ L+ M  YL+L
Sbjct: 397 QSLRVLLPPLNSEFANLAKNSSLAFAVGYPELYNLANTTFNQTGKPIEVFLMMMATYLTL 456

Query: 378 SIMIALFMNRLNAKIALKEK 397
           +++I+L MN+LN  +  KE+
Sbjct: 457 NLLISLNMNQLNKAVQFKER 476



 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 4/165 (2%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D R   I+ Q+I+ + + + F +   N+  N+ +       GFL   AGF I + ++ 
Sbjct: 16  LRDERFWQIAFQVIVTIAVILTFSYLFGNLSQNLRRQGTEFSFGFLQNPAGFGIGENMLG 75

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y +  SYA  I  G VN+  L F  +I ATI+G   G    S N L+  I R YV + RN
Sbjct: 76  YETQDSYAKVIQAGIVNSLRLIFVSIITATIVGVAAGVASFSDNWLLHKISRTYVGLVRN 135

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFG----MFLNNRGLSFP 179
           +P L+ + F Y +V   +P   + IV P      +  NNR +S P
Sbjct: 136 VPLLLQLVFWYSAVFLAIPTEANQIVFPNPSLPLIVANNRNVSLP 180


>gi|161170239|gb|ABX59210.1| ABC-type amino acid transport system permease component [uncultured
           marine group II euryarchaeote EF100_57A08]
          Length = 626

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 191/349 (54%), Gaps = 13/349 (3%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATI 109
           ME+ N+     F+++   F+I+   +  T+  D  +   I    +N+  +    ++  TI
Sbjct: 280 MERWNIEFA--FMNDANPFQINTWPIEVTNNIDDRWRFWI-AALLNSIRVTLLSIVFCTI 336

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP--IPDHSIVLPF 167
           +G +VG  RLS+NKL + +   YVE+FRN+P  V++F +   + + LP  I + +IV   
Sbjct: 337 LGIIVGVSRLSSNKLTSSMATAYVEIFRNMPLAVLLFLISTQLGTTLPLFIAEENIV--- 393

Query: 168 GM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           GM + +N+G+  P   +      F+  F + +   +          E   +   +  I  
Sbjct: 394 GMIYYSNQGIYLPGFELSHLIYGFLIVFAIWVYWQIKDREGVDDSEEGVRRRFTIWVIGI 453

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEI 284
            +  G+     I+L   +  +  + G ++   G+   ++ EF+++ I L+ +T A +AEI
Sbjct: 454 AVALGIILSGDISLPNYIKPNMGIPGTWDIEEGTGFEMTVEFLAMIIGLTLFTTAVVAEI 513

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  + ++PRGQ+EAA+++GL+  +  RLV+LPQA+RS+IP L SQY+N+ KNSSLA+ V
Sbjct: 514 VRGSIQSLPRGQVEAAVSIGLSPYQRLRLVILPQALRSMIPLLNSQYMNVWKNSSLAMIV 573

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++D+  V   ++N  G+ I + ++ +  Y + S++I+  MN  N ++ 
Sbjct: 574 AYSDVFYVIFVMMNNVGKLIPLFILLLLTYQAGSLLISGIMNVYNYRVT 622


>gi|25809421|emb|CAD57653.1| general L-amino acid transport system permease protein AapQ
           [Rhizobium etli]
          Length = 102

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 84/102 (82%)

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALGL     TRLV++PQA+R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T
Sbjct: 1   QTEAAGALGLHPSSITRLVVIPQALRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGST 60

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +NQTGQA+E+ILIWM IYL LS++ +L MN  NAK+AL E+
Sbjct: 61  TLNQTGQAVEVILIWMVIYLGLSVVTSLLMNWFNAKMALVER 102


>gi|222870369|gb|EEF07500.1| predicted protein [Populus trichocarpa]
          Length = 145

 Score =  137 bits (346), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/140 (50%), Positives = 99/140 (70%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F   GG  ++PEF++L  AL  Y AA+ AEIVR+GL AVPRGQ  AA ALG+   +  RL
Sbjct: 2   FGIDGGLALTPEFLALVGALGLYAAAYCAEIVRAGLQAVPRGQWNAASALGMRRGQQLRL 61

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA+R IIPP T+  L+ +KNSSLAVA+G+ D+V V  T ++QTGQAIE + I   +
Sbjct: 62  VVLPQALRVIIPPYTNLALSTIKNSSLAVAIGYPDVVMVANTAMSQTGQAIECVTIIAVV 121

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           YL+++++ +L +N  N + A
Sbjct: 122 YLAINLLTSLALNAFNQRSA 141


>gi|75906962|ref|YP_321258.1| amino acid ABC transporter permease [Anabaena variabilis ATCC
           29413]
 gi|75700687|gb|ABA20363.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein / neutral amino acid ABC
           transporter membrane protein [Anabaena variabilis ATCC
           29413]
          Length = 308

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/137 (55%), Positives = 98/137 (71%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T SPEF +L + L  YT AFIAEIVR G+ +V +GQ EA  +LGL      RLV+ PQA+
Sbjct: 172 TFSPEFSALLLGLIFYTGAFIAEIVRGGIQSVSKGQWEAGRSLGLNPSLIMRLVIFPQAL 231

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R IIPPLTSQYLNL KNSSLA+A+G+ D+  V  T  NQTG+A+E++L+ M  YLSLS+ 
Sbjct: 232 RVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGKAVEVMLLLMLTYLSLSLT 291

Query: 381 IALFMNRLNAKIALKEK 397
           I+L MN  N  + +KE+
Sbjct: 292 ISLIMNAFNRTVQIKER 308



 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 90/165 (54%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           F  D R   I+ Q+I   L   +    + N+  N+++  +  G  FL ++A F+I + ++
Sbjct: 8   FWRDNRFWYIAGQLIALFLAAFVVTILLGNLNRNLQRLGIQFGFDFLKQQASFDIGETLI 67

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    +Y+ A+ VG +N+  +AF G+I  TI+G++ G  RLS N LV  I  VYVE+FR
Sbjct: 68  AYKPTDTYSLALWVGLINSLRIAFVGVILTTIVGSIAGIARLSDNWLVRNISLVYVEIFR 127

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           N P L+ + F Y +V   LP  D+ I L   + L+  GL  P  T
Sbjct: 128 NTPLLLQLLFWYFAVFLGLPKADNKISLGGFISLSQNGLELPWFT 172


>gi|17231657|ref|NP_488205.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC
           7120]
 gi|17133300|dbj|BAB75864.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC
           7120]
          Length = 308

 Score =  134 bits (336), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/137 (55%), Positives = 98/137 (71%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T SPEF +L + L  YT AFIAEIVR G+ +V +GQ EA  +LGL      RLV+ PQA+
Sbjct: 172 TFSPEFSALLLGLIFYTGAFIAEIVRGGIQSVSKGQWEAGRSLGLNPSLIMRLVIFPQAL 231

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R IIPPLTSQYLNL KNSSLA+A+G+ D+  V  T  NQTG+A+E++L+ M  YLSLS+ 
Sbjct: 232 RVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGKAVEVMLLLMLTYLSLSLT 291

Query: 381 IALFMNRLNAKIALKEK 397
           I+L MN  N  + +KE+
Sbjct: 292 ISLIMNAFNRTVQIKER 308



 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 89/165 (53%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           F  D R   I+ Q+I   L   +    + N+  N+++  +  G  FL ++A F+I + ++
Sbjct: 8   FWRDNRFWYIAGQLIALFLAAFVVAILLGNLNRNLQRLGIQFGFDFLKQQASFDIGETLI 67

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    +Y+ A+ VG +N+  +AF G+I  TI+G L G  RLS N LV  I  VYVE+FR
Sbjct: 68  AYKPTDTYSLALWVGLINSLRIAFVGIILTTIVGILAGIARLSDNWLVRNISLVYVEIFR 127

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           N P L+ + F Y +V   LP  D+ I L   + L+  GL  P  T
Sbjct: 128 NTPLLLQLLFWYFAVFLGLPRADNKISLGGFIGLSQNGLELPWFT 172


>gi|297624237|ref|YP_003705671.1| polar amino acid ABC transporter inner membrane subunit [Truepera
           radiovictrix DSM 17093]
 gi|297165417|gb|ADI15128.1| polar amino acid ABC transporter, inner membrane subunit [Truepera
           radiovictrix DSM 17093]
          Length = 613

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 103/149 (69%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P + + ++ GG  ++  FM+L + L  YTA+FIAEIVR G+ AV +GQ EAA +LGL+  
Sbjct: 465 PTIPRSDYEGGVRLTAAFMALLLGLVIYTASFIAEIVRGGIQAVNKGQREAAKSLGLSDA 524

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +   LV+ PQA+R I+PPL SQYLNL KNSSLA+ + + D  ++G  + NQTG  + IIL
Sbjct: 525 QTFNLVVFPQALRIILPPLISQYLNLTKNSSLALLITYPDFFAIGRIVANQTGATVPIIL 584

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I +  YL++S++ A  +N +N ++AL E+
Sbjct: 585 IIIAGYLTISLIFAFILNIVNERLALVER 613



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 5/171 (2%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            R+ F  +++V  I  Q+I   L+ + F    NNV   +E++N+     FL  RAG  I 
Sbjct: 13  ERIPFYRNVKVIGILAQLIFLALVVMGFWVLYNNVTTALERANIPANFNFLRARAGIPIG 72

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +  + Y +  +YA A+ VG +NT  ++  G++ AT++G LVG  RLS+N L+  I  +YV
Sbjct: 73  ESPIRYNTADTYARALWVGVLNTLKVSLVGVVLATLLGILVGVMRLSSNWLLRQIASIYV 132

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDH---SIVLPFGMFLNNRGLSFPTL 181
           E  RN P  V + F + +VL  +P+P      I LP G + +  GL+ P L
Sbjct: 133 ETIRNTPLAVQLVFWFFAVL--VPLPPRISGPIELPGGAYFSQVGLALPWL 181


>gi|220910019|ref|YP_002485330.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7425]
 gi|219866630|gb|ACL46969.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7425]
          Length = 305

 Score =  132 bits (332), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/141 (51%), Positives = 103/141 (73%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G   +SPEF +L + L+ YT  FIAEIVR G+ +VPRGQ EAA +LGL   +   LV+ 
Sbjct: 165 LGELNLSPEFCALLLGLTFYTGTFIAEIVRGGIQSVPRGQWEAARSLGLKPAQTLWLVIF 224

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ++R+I+PPL +QYLNL KNSSLA+AVG+ DL +V  T  NQTG+A+E++L+ +  YLS
Sbjct: 225 PQSLRAIVPPLGNQYLNLAKNSSLALAVGYPDLYAVASTTYNQTGRAVEMMLLILITYLS 284

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           LS+ I+L +N  N ++ L E+
Sbjct: 285 LSLSISLLLNLYNRRVQLPER 305



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           R     D R   I+ Q I  L++ ++ L+  NN+  N+++  L    GFL+ +AGF I +
Sbjct: 6   RPPLWRDSRFWQIAGQAIALLVVVLLLLFLGNNLRQNLQRLGLQPDFGFLNFQAGFSIGE 65

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
             + Y    SY  A+LVG VN+  +  SG++ ATI+G L G  RLS N L+  +  +YVE
Sbjct: 66  TPLDYKPTYSYWRALLVGLVNSLRVMISGIVLATIVGVLAGIARLSDNWLMRQLATLYVE 125

Query: 135 VFRNIPPLVVIFFLYKSVLSVLP 157
           + RN P L+ + F Y  V   LP
Sbjct: 126 ILRNAPLLLQLLFWYFVVFLSLP 148


>gi|119510484|ref|ZP_01629617.1| permease protein of amino acid ABC transporter [Nodularia spumigena
           CCY9414]
 gi|119464906|gb|EAW45810.1| permease protein of amino acid ABC transporter [Nodularia spumigena
           CCY9414]
          Length = 306

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/135 (53%), Positives = 99/135 (73%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           ++SPEF +L + L  +T AFIAEIVR G+ +VP+GQ EAA +LG       RLV+ PQA+
Sbjct: 172 SLSPEFSALLLGLVFFTGAFIAEIVRGGIQSVPKGQWEAARSLGFPPLLIMRLVIFPQAL 231

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R IIPPLTSQYLNL KNSSLA+A+G+ D+  V  T  NQTG+A+E++L+ +  YL+LS+ 
Sbjct: 232 RVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVASTTFNQTGRAVEVMLLLILTYLTLSLT 291

Query: 381 IALFMNRLNAKIALK 395
           I+L MN  N ++ +K
Sbjct: 292 ISLTMNLFNRQVQIK 306



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 85/164 (51%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D R  NI  Q+I   L  V+ +    N+  N+++  + LG  FL ++A F I + ++ Y 
Sbjct: 11  DYRFWNIVAQLIAVSLAAVVVIILWGNLNRNLQQLGIQLGFDFLQQQASFGIGETLINYQ 70

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y+ A+ VG VN+  +A  G+   TI+G   G  RLS N LV  I  +YVE+FRN P
Sbjct: 71  PTDTYSRALWVGLVNSLRVAVLGIFFTTIVGISAGIARLSDNWLVRKITTIYVEIFRNTP 130

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
            L+ + F Y +V    P  +  I L   + ++  G+  P  ++ 
Sbjct: 131 LLLQLLFWYFAVFLGFPRREDKISLWGFLGISQDGIELPWFSLS 174


>gi|78779550|ref|YP_397662.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           MIT 9312]
 gi|78713049|gb|ABB50226.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Prochlorococcus marinus str. MIT 9312]
          Length = 297

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 80/347 (23%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           NN+  N+ ++ +     +L++ A F + +  +PY+   SYA A+ +G++N+  +  S ++
Sbjct: 26  NNLIINLTRTGIGFNFNWLTKPASFSLAEHPLPYSPSDSYAWALFMGWMNSLKVIISSLV 85

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A+ IGTL+G  R+  N     I   Y+ V R  P L+ +   Y                
Sbjct: 86  LASFIGTLIGFLRVGKNSFFRIITAGYITVIRQTPLLIQLMCWY---------------- 129

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F  FL+ R  SF  L+   N        +    + LF   LS  F              
Sbjct: 130 -FVGFLSIRNNSFLNLSNVVN--------ISNKGIELFGLNLSSEFSA------------ 168

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L+FGL                                 F S +IA          E++
Sbjct: 169 --LLFGLSI-------------------------------FSSAFIA----------EVI 185

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ +VP GQ EA  +LG++ ++    +++PQA+ + IP LTSQYLNL KNS+LA+A+G
Sbjct: 186 RGGIQSVPVGQWEAFRSLGISEKQGFIKIIIPQALPAFIPGLTSQYLNLAKNSTLAIAIG 245

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +AD+ ++  TIINQTG+A+E  +I +  +L L+++I   M  ++  I
Sbjct: 246 YADIYAINDTIINQTGRAVECFMILLCSFLILNLVITKVMGIIDKSI 292


>gi|72382452|ref|YP_291807.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Prochlorococcus marinus str.
           NATL2A]
 gi|72002302|gb|AAZ58104.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Prochlorococcus marinus str. NATL2A]
          Length = 299

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 84/107 (78%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T S EF++L   LS +T+A+IAE++R G+++V RGQ EA  +LG++ RK    ++LPQ
Sbjct: 159 GLTFSSEFLALLFGLSIFTSAYIAEVIRGGILSVSRGQWEAFRSLGISERKGLIRIILPQ 218

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+ +IIP LTSQYLNL KNS+LA+AVG++D+ ++  TIINQTG+AIE
Sbjct: 219 ALPAIIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRAIE 265



 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 3/143 (2%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           +NN+  N+ ++ L     +L + A F + +  +PYTS  SYA A+ +G++N+  +  S +
Sbjct: 25  INNLTINLIRTGLGFNFSWLFKPASFALAEHPLPYTSSDSYAWALFIGWLNSLKVIVSSL 84

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           I AT +GTL+G  R   N L+  I   Y+ + R  P L+ + F Y   +  L + D+  +
Sbjct: 85  ILATFLGTLIGFARTGTNSLLGLISAGYITIIRQTPLLLQLMFWY--FVGFLGLKDNMFI 142

Query: 165 LPFGMF-LNNRGLSFPTLTMDTN 186
               +F ++N+G+ F  LT  + 
Sbjct: 143 QIKNIFNISNKGIEFSGLTFSSE 165


>gi|124026133|ref|YP_001015249.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           NATL1A]
 gi|123961201|gb|ABM75984.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Prochlorococcus marinus str.
           NATL1A]
          Length = 299

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 59/107 (55%), Positives = 84/107 (78%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T S EF++L   LS +T+A+IAE++R G+++V RGQ EA  +LG++ RK    ++LPQ
Sbjct: 159 GLTFSSEFLALLFGLSIFTSAYIAEVIRGGILSVSRGQWEAFRSLGISERKGLIRIILPQ 218

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+ +IIP LTSQYLNL KNS+LA+AVG++D+ ++  TIINQTG+AIE
Sbjct: 219 ALPAIIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRAIE 265



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 3/143 (2%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           +NN+  N+ ++ L     +L + A F + +  +PYTS  SYA A+ +G++N+  +  S +
Sbjct: 25  INNLTINLIRTGLGFNFSWLFKPASFALAEHPLPYTSSDSYAWALFIGWLNSLKVIVSSL 84

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           I AT  GTL+G  R   N L+  I   Y+ + R  P L+ + F Y   +  L + D+  +
Sbjct: 85  ILATFFGTLIGFARTGTNSLLGLISAGYITIIRQTPLLLQLMFWY--FVGFLGLKDNMFI 142

Query: 165 LPFGMF-LNNRGLSFPTLTMDTN 186
               +F ++N+G+ F  LT  + 
Sbjct: 143 QIKNIFNISNKGIEFSGLTFSSE 165


>gi|123966464|ref|YP_001011545.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200830|gb|ABM72438.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9515]
          Length = 297

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 61/138 (44%), Positives = 96/138 (69%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   S EF +L   LS +++AFIAE++R G+ +VP GQ EA  +LG++ ++    +++PQ
Sbjct: 159 GLNFSSEFSALLFGLSIFSSAFIAEVIRGGIQSVPLGQWEAFRSLGISEKQGFIKIIIPQ 218

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ + IP LTSQYLNL KNS+LA+AVG++D+ ++  TIINQTG+A+E  +I +F +L L+
Sbjct: 219 ALPAFIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRALECFIILLFSFLILN 278

Query: 379 IMIALFMNRLNAKIALKE 396
           ++I   M  ++  I  K 
Sbjct: 279 LLITKVMEIIDKSIMKKR 296



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 57/105 (54%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           +NN+  N++++++     +L + A F + +  +PY+   +YA AI +G++N+  +  S +
Sbjct: 25  INNLMINLKRTDIGFKFDWLIKPASFSLAEHSLPYSPSDNYAWAIFIGWMNSLKVIISSL 84

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I AT +GTL+G  R+  N         Y+ V R  P L+ +   Y
Sbjct: 85  ILATCLGTLIGFLRVGKNSFFRIFTAGYITVIRQTPLLIQLMCWY 129


>gi|33240125|ref|NP_875067.1| ABC-type amino acid transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33237652|gb|AAP99719.1| ABC-type amino acid transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 299

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/134 (49%), Positives = 96/134 (71%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S EF +L + LS +T A+IAE+VR G+ +VPRGQ EA  +LGL+       +++PQ
Sbjct: 159 GINLSAEFSALLLGLSVFTGAYIAEVVRGGINSVPRGQWEAFKSLGLSDIHGLYKIIIPQ 218

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ +IIP LTSQYLNL KNS+LA+A+G+AD+ +V  TIINQTG+AIE  ++ +  +L L+
Sbjct: 219 ALPAIIPGLTSQYLNLAKNSTLAIAIGYADIYAVNDTIINQTGRAIECFILLLLSFLFLN 278

Query: 379 IMIALFMNRLNAKI 392
           I+I+  M  +N  I
Sbjct: 279 IIISSLMEMVNKLI 292



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 3/133 (2%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           NN+  N+  + L     +L   A F + +  +P++   SYA A+ +G++N+  + F+ + 
Sbjct: 26  NNIIVNLYNTGLGFNYSWLLRPASFALAEHSLPFSPSDSYAWALFIGWLNSLKVIFASLF 85

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            AT IG  VG  R+  N L+  I   Y+ + R  P L+ + F Y   +  L + D +I  
Sbjct: 86  IATFIGFFVGIARIGTNILLNLISTGYITIIRQTPLLLQLMFWY--FVGFLGLKDKAIAP 143

Query: 166 PFGMF-LNNRGLS 177
             G+  ++N+G++
Sbjct: 144 LRGILSISNQGIN 156


>gi|113955270|ref|YP_730399.1| polar amino acid ABC transporter permease [Synechococcus sp.
           CC9311]
 gi|113882621|gb|ABI47579.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. CC9311]
          Length = 299

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 8/153 (5%)

Query: 217 KALPLLYISTFLIF----GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           + +PLL    F  F    GLP+     L   +H       Q   + G T+S EF ++ + 
Sbjct: 117 RQIPLLLQLLFWYFVAFLGLPSEPFAPLGAVIHLSN----QGISLLGVTLSVEFAAVLVG 172

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS +T A IAE+VR GL +VPRGQ EA  +LG+T     R ++LPQA+ +I+P L+SQYL
Sbjct: 173 LSVFTGASIAEVVRGGLDSVPRGQWEAFRSLGMTEGLGLRRIVLPQALPAILPALSSQYL 232

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           NL KNS+LA+AVG+ADL +V  T I QTG+AIE
Sbjct: 233 NLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 265



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 5/159 (3%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q+I+ L+L  +    +NN+  N+ ++ L L   +L   AGF + +  +PY    S A A+
Sbjct: 10  QLIIVLVLLTVMGILINNLAVNLIRTGLGLSFDWLWRPAGFALSEHPLPYQPSDSTAWAL 69

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L+G++N+  +  +G++ AT++G   GA R S N L+  +  +YV   R IP L+ + F Y
Sbjct: 70  LMGWLNSLRVIVAGIVLATLLGVSTGAARRSLNPLLRQLAALYVGSIRQIPLLLQLLFWY 129

Query: 150 KSVLSVLPIPDHSIVLPFG--MFLNNRGLSFPTLTMDTN 186
              ++ L +P      P G  + L+N+G+S   +T+   
Sbjct: 130 --FVAFLGLPSEPFA-PLGAVIHLSNQGISLLGVTLSVE 165


>gi|209528047|ref|ZP_03276527.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
 gi|209491533|gb|EDZ91908.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
          Length = 113

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/104 (55%), Positives = 80/104 (76%)

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA +LGL      RLV+ PQA+R IIPPL SQYLNL KNSSLA+AV +ADL +V 
Sbjct: 10  QGQWEAARSLGLKSGLVMRLVVFPQALRVIIPPLNSQYLNLAKNSSLAIAVAYADLYNVA 69

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            T  NQ+G+A+E++LI M  YL+++++I+LFMN LN ++ L+E+
Sbjct: 70  NTTFNQSGRAVEVMLIIMAAYLTINLIISLFMNFLNRRVQLQER 113


>gi|116072942|ref|ZP_01470204.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. RS9916]
 gi|116068247|gb|EAU73999.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. RS9916]
          Length = 300

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 79/107 (73%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S EF ++ + LS +T A IAE+VR GL +VPRGQ EA  +LGL+     R V+LPQ
Sbjct: 160 GVHLSVEFTAVLLGLSVFTGASIAEVVRGGLDSVPRGQWEAFRSLGLSEAMGLRRVVLPQ 219

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE
Sbjct: 220 ALPAILPGLTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 266



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 88/157 (56%), Gaps = 5/157 (3%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R H   +Q+ + ++L  +    +NN+  N+ ++ L L   +LS  AGF + +  +PY S 
Sbjct: 4   RSHRWLLQLGIVVVLLTLTGVLINNLAVNLIRTGLGLSFEWLSRPAGFALAEHPLPYRSS 63

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             YA A+LVG++N+  +  +G++ AT++G L GA R S N L+  +  +YV + R +P L
Sbjct: 64  DPYAWALLVGWLNSLKVILAGLVTATVLGVLAGAARRSINPLLRQLAALYVGLIRQVPLL 123

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFG--MFLNNRGLS 177
           + + F Y   L  LP  + S   P G  + L N+G+S
Sbjct: 124 LQLLFWYFVALLGLPRTNPS---PLGSLLTLTNQGIS 157


>gi|78213329|ref|YP_382108.1| amino acid ABC transporter permease [Synechococcus sp. CC9605]
 gi|78197788|gb|ABB35553.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. CC9605]
          Length = 296

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 106/189 (56%), Gaps = 17/189 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIF----GLPTLV 236
           A   V + VLG+      +  +RH     G      + +PLL    F  F    GLP++ 
Sbjct: 80  AAGLVLATVLGVAAGAARSSSNRHLRSLGGGYVALIRQVPLLLQLLFWYFVAFLGLPSVP 139

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +  L    +    +LG         +S EF ++ + L+ +T A IAEIVR G+ AVPRGQ
Sbjct: 140 VGGLIRLSNQGIQLLGL-------NLSVEFCAVLVGLTVFTGASIAEIVRGGINAVPRGQ 192

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA  +LGL      R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T 
Sbjct: 193 WEAFRSLGLGEGLGVRRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTT 252

Query: 357 INQTGQAIE 365
           I QTG AIE
Sbjct: 253 ITQTGHAIE 261



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 90/167 (53%), Gaps = 8/167 (4%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
           MR   + VQ+ +A +L  +    +NN+  N+ ++ L LG G+L   AGF + +  +PY  
Sbjct: 1   MRQRRLLVQVGVAAVLIGLLALLINNLAVNLIRTGLGLGFGWLGRPAGFALAETALPYAP 60

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             SY  A+ +G++N+  +  +G++ AT++G   GA R S+N+ +  +   YV + R +P 
Sbjct: 61  SDSYLWALTIGWLNSLKVIAAGLVLATVLGVAAGAARSSSNRHLRSLGGGYVALIRQVPL 120

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFG--MFLNNRGLSFPTLTMDTN 186
           L+ + F Y   ++ L +P     +P G  + L+N+G+    L +   
Sbjct: 121 LLQLLFWY--FVAFLGLPS----VPVGGLIRLSNQGIQLLGLNLSVE 161


>gi|33863168|ref|NP_894728.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9313]
 gi|33635085|emb|CAE21071.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9313]
          Length = 297

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 79/107 (73%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S EF +L + LS +TAA IAEIVR GL +VP GQ EA  +LGL  R   R V+LPQ
Sbjct: 159 GLHLSVEFSALLVGLSVFTAASIAEIVRGGLNSVPSGQWEAFRSLGLPERFGLRRVVLPQ 218

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+ +I+P LTSQYLNL KNS+LA+AVG+AD+ +V  T I QTG+AIE
Sbjct: 219 ALPAILPGLTSQYLNLAKNSTLAIAVGYADVYAVSDTTITQTGRAIE 265



 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 70/127 (55%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R  +  +Q+ +AL L  I    +NN+  N+ ++++ L   +L   AGF + +  + Y   
Sbjct: 3   RSQHFCLQVGVALALLTILGVLINNLAVNLIRTDMGLSFLWLGRPAGFALAEHPLSYRPS 62

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SYA A+ +G++N+  +   G+I AT+IG L GA R S N L+  +   YV + R IP L
Sbjct: 63  DSYAWALCMGWLNSLKVILCGLILATVIGVLAGAARSSRNLLLRAMSSGYVALIRQIPLL 122

Query: 143 VVIFFLY 149
           + + F Y
Sbjct: 123 LQLLFWY 129


>gi|159904019|ref|YP_001551363.1| ABC-type amino acid transport system, permease component
           [Prochlorococcus marinus str. MIT 9211]
 gi|159889195|gb|ABX09409.1| ABC-type amino acid transport system, permease component
           [Prochlorococcus marinus str. MIT 9211]
          Length = 297

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 93/134 (69%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   S EF +L + LS +T A+I+E+VR G+ +V +GQ EA  +LGL+       V++PQ
Sbjct: 158 GFNFSAEFSALLLGLSVFTGAYISEVVRGGIQSVAKGQWEAFRSLGLSETAGLYKVIMPQ 217

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ +I+P LTSQYLNL KNS+LA+AVG+AD+ ++  T+I QTG+A+E  ++ +  +L L+
Sbjct: 218 ALPAILPGLTSQYLNLAKNSTLAIAVGYADIYAISDTVITQTGRAVEGFILLLTGFLFLN 277

Query: 379 IMIALFMNRLNAKI 392
           ++I+  M  +N  I
Sbjct: 278 LIISNLMEIINTLI 291



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 60/105 (57%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           +NN+  N+ ++ L +  G+L   AGF + +  + Y+   SY  AI +G++N+  + F+ +
Sbjct: 25  INNLSVNLLRAGLGINFGWLLRPAGFALAEHSLKYSPSDSYLWAIFMGWLNSLKVIFASL 84

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + ATIIG LVG  R   N L+  +   YV + R IP L+ + F Y
Sbjct: 85  LIATIIGFLVGIARTGNNILIGLLSSAYVSLIRQIPLLLQLMFWY 129


>gi|87124568|ref|ZP_01080417.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. RS9917]
 gi|86168140|gb|EAQ69398.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. RS9917]
          Length = 301

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 78/107 (72%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S EF ++ + LS ++ A IAE+VR GL AVPRGQ EA  +LGL      R V+LPQ
Sbjct: 161 GVPLSVEFSAVLVGLSVFSGAAIAELVRGGLDAVPRGQWEAFRSLGLPEGLGLRRVILPQ 220

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+ +I+P L+SQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE
Sbjct: 221 ALPAILPGLSSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 267



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 98/190 (51%), Gaps = 7/190 (3%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           VNN+  N+ ++ L L   +LS  AGF + +  +PY    SYA A+L+G++N+  +  +G+
Sbjct: 25  VNNLTVNLIRTGLGLSFRWLSRPAGFALAEHPLPYAPSDSYAWALLMGWLNSLKVIVAGL 84

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-KSVLSVLPIPDHSI 163
           I AT++G   GA R SAN L+ W+  +YV + R IP L+ + F Y  + L + P  +   
Sbjct: 85  ILATLLGVSAGAARRSANALLRWLAALYVGLIRQIPLLLQLLFWYFVAFLGLPPASEPLS 144

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            LP  + L+N+G+    + +        FS VL + LS+F+             A+P   
Sbjct: 145 PLPALLRLSNQGIELLGVPLSVE-----FSAVL-VGLSVFSGAAIAELVRGGLDAVPRGQ 198

Query: 224 ISTFLIFGLP 233
              F   GLP
Sbjct: 199 WEAFRSLGLP 208


>gi|33865375|ref|NP_896934.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 8102]
 gi|33632544|emb|CAE07356.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 8102]
          Length = 296

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 77/107 (71%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S EF ++   L+ +T A IAEIVR G+ AVPRGQ EA  +LGL      R ++LPQ
Sbjct: 155 GLNLSVEFCAVLTGLTVFTGASIAEIVRGGINAVPRGQWEAFRSLGLNEGLGLRRIVLPQ 214

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE
Sbjct: 215 ALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 261



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 8/136 (5%)

Query: 51  NMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110
           N+ ++ L LG G+LS  AGF + +  +PY    SY  A+ +G++N+  +  +G++ AT++
Sbjct: 30  NLIRTGLGLGFGWLSRPAGFALAETALPYAPSDSYLWALTIGWLNSLKVILAGLVLATLL 89

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           G   GA R S N+L+  +   YV + R +P L+ + F Y   ++ L +P     +P G  
Sbjct: 90  GVAAGAARNSGNRLLRSLAGTYVALIRQVPLLLQLLFWY--FVAFLGLPS----MPVGGL 143

Query: 171 --LNNRGLSFPTLTMD 184
             L+N+G+    L + 
Sbjct: 144 IQLSNQGIQLLGLNLS 159


>gi|78184423|ref|YP_376858.1| amino acid ABC transporter permease [Synechococcus sp. CC9902]
 gi|78168717|gb|ABB25814.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. CC9902]
          Length = 300

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 109/188 (57%), Gaps = 13/188 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF- 246
           K+ +   +L   L + A   +R    +  ++L   Y++  LI  +P L+ +   Y + F 
Sbjct: 81  KVILVGLLLATTLGV-AAGAARSSRNRLLRSLSGGYVA--LIRQVPLLLQLLFWYFVAFL 137

Query: 247 ---DKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
              D PV G  +F        G  +S EF S+   L  +T A IAEIVR G+ AV RGQ 
Sbjct: 138 GLPDTPVGGLIHFSNQGIRLLGLNLSVEFCSVLTGLVVFTGASIAEIVRGGINAVSRGQW 197

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  +LGL+     R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I
Sbjct: 198 EAFRSLGLSEGLGLRRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTI 257

Query: 358 NQTGQAIE 365
            QTG+AIE
Sbjct: 258 TQTGRAIE 265



 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           +NN+  N+ ++ L L  G+L   AGF + +  +PY    SYA A+ +G++N+  +   G+
Sbjct: 28  INNITVNLIRTGLGLDFGWLWRPAGFALAETALPYAPTDSYAWALTIGWLNSLKVILVGL 87

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           + AT +G   GA R S N+L+  +   YV + R +P L+ + F Y   ++ L +PD  +
Sbjct: 88  LLATTLGVAAGAARSSRNRLLRSLSGGYVALIRQVPLLLQLLFWY--FVAFLGLPDTPV 144


>gi|124022921|ref|YP_001017228.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           MIT 9303]
 gi|123963207|gb|ABM77963.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9303]
          Length = 297

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 78/107 (72%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S EF +L + LS +TAA IAEIVR GL +VP GQ EA  +LGL      R V+LPQ
Sbjct: 159 GLNLSVEFSALLVGLSIFTAASIAEIVRGGLNSVPSGQWEAFRSLGLPEGFGLRRVVLPQ 218

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+ +I+P LTSQYLNL KNS+LA+AVG+AD+ +V  T I QTG+AIE
Sbjct: 219 ALPAILPGLTSQYLNLAKNSTLAIAVGYADVYAVSDTTITQTGRAIE 265



 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 71/127 (55%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R  +  +Q+ +AL L  I    +NN+  N+ ++++ L   +L   AGF + +  + Y   
Sbjct: 3   RSQHFCLQVGVALALLTILGVLINNLAVNLIRTDMGLSFLWLGRPAGFALAEHPLSYRPS 62

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SYA A+ +G++N+  +   G++ AT+IG L GA R S+N L+  +   YV + R IP L
Sbjct: 63  DSYAWALCMGWLNSLKVILCGLVLATVIGVLAGAARSSSNLLLRALSSGYVALIRQIPLL 122

Query: 143 VVIFFLY 149
           + + F Y
Sbjct: 123 LQLLFWY 129


>gi|148239753|ref|YP_001225140.1| ABC-type amino acid transport system permease component
           [Synechococcus sp. WH 7803]
 gi|147848292|emb|CAK23843.1| ABC-type amino acid transport system permease component
           [Synechococcus sp. WH 7803]
          Length = 299

 Score =  114 bits (284), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 106/192 (55%), Gaps = 18/192 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRH----FHEKTG------KALPLLYISTFLIF----GLP 233
           ++   S  L  VL + A   SR     F    G      + +PLL    F  F    GLP
Sbjct: 78  RVIACSIALATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWYFVAFLGLP 137

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           +  L  L   +        Q   + G  +S EF ++ + LS +T A IAE+VR GL AVP
Sbjct: 138 SEPLAPLGALIRISN----QSINVMGLNLSVEFAAVLVGLSVFTGASIAEVVRGGLDAVP 193

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA  +LG+      + V+LPQA+ +I+P L+SQYLNL KNS+L++AVG+ADL +V 
Sbjct: 194 RGQWEAFRSLGIGEGLGLKSVVLPQALPAILPALSSQYLNLAKNSTLSIAVGYADLYAVS 253

Query: 354 GTIINQTGQAIE 365
            T I QTG+AIE
Sbjct: 254 DTAITQTGRAIE 265



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 60/105 (57%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           +NN+  N+ ++ L L   +LS  AGF I + ++P+    S A A+L+G++N+  +    +
Sbjct: 25  INNLTVNLIRTGLGLSFRWLSRPAGFAISEHLLPFQPSDSMAWALLMGWLNSLRVIACSI 84

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             AT++G + GA   S N L + +  +YV + R IP L+ + F Y
Sbjct: 85  ALATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWY 129


>gi|88808789|ref|ZP_01124299.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 7805]
 gi|88787777|gb|EAR18934.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 7805]
          Length = 299

 Score =  113 bits (282), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 105/184 (57%), Gaps = 14/184 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIF----GLPTLVLIALK 241
           F+ VLG+V    +   +  F    G      + +PLL    F  F    GLP+  L  L 
Sbjct: 86  FATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWYFVAFLGLPSEPLAPLG 145

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             +        Q   + G  +S EF ++ + LS +T A IAE+VR GL AVPRGQ EA  
Sbjct: 146 ALIRVSN----QAITVMGLNLSVEFAAVLVGLSVFTGAAIAEVVRGGLDAVPRGQWEAFR 201

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+      + V+LPQA+ +I+P L+SQYLNL KNS+L++AVG+ADL +V  T I QTG
Sbjct: 202 SLGIGEGLGLQRVVLPQALPAILPALSSQYLNLAKNSTLSIAVGYADLYAVSDTAITQTG 261

Query: 362 QAIE 365
           +AIE
Sbjct: 262 RAIE 265



 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 60/105 (57%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           +NN+  N+ ++ L L   +LS  AGF I + ++P+    S A A+L+G++N+  +    +
Sbjct: 25  INNLTVNLIRTGLGLSFRWLSRPAGFAISEHLLPFQPGDSMAWALLMGWLNSLRVIACSI 84

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             AT++G + GA   S N L + +  +YV + R IP L+ + F Y
Sbjct: 85  AFATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWY 129


>gi|260769396|ref|ZP_05878329.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260614734|gb|EEX39920.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
          Length = 314

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 117/206 (56%), Gaps = 19/206 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ +LG++  L   R++++   +T + L L Y+   LI G P LV I + Y        
Sbjct: 128 IFAVLLGLIFGLM--RVAKN---QTARNLALTYVE--LIRGTPLLVQIFIVY-------- 172

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                FIG       F +  +ALS +T A++AEIVR+G+ A+P GQMEAA +LG+T+ KA
Sbjct: 173 ----FFIGTVLDFDRFTAGVVALSVFTGAYVAEIVRAGIQAIPNGQMEAARSLGMTYPKA 228

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA++  +PPL  Q++NL+K+SSL   +   DL   G  +++ +    E+    
Sbjct: 229 MRYVILPQALKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTV 288

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +YL ++  ++  + RL  +++  +
Sbjct: 289 AALYLLVTGTLSWAIQRLEKRLSASD 314


>gi|315181927|gb|ADT88840.1| hypothetical amino acid ABC transporter, permease protein [Vibrio
           furnissii NCTC 11218]
          Length = 314

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 117/206 (56%), Gaps = 19/206 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ +LG++  L   R++++   +T + L L Y+   LI G P LV I + Y        
Sbjct: 128 IFAVLLGLIFGLM--RVAKN---QTARNLALTYVE--LIRGTPLLVQIFIVY-------- 172

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                FIG       F +  +ALS +T A++AEIVR+G+ A+P GQMEAA +LG+T+ KA
Sbjct: 173 ----FFIGTVLDFDRFTAGVVALSVFTGAYVAEIVRAGIQAIPNGQMEAARSLGMTYPKA 228

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA++  +PPL  Q++NL+K+SSL   +   DL   G  +++ +    E+    
Sbjct: 229 MRYVILPQALKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTV 288

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +YL ++  ++  + RL  +++  +
Sbjct: 289 AALYLLVTGTLSWAIQRLEKRLSASD 314


>gi|116070917|ref|ZP_01468186.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. BL107]
 gi|116066322|gb|EAU72079.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. BL107]
          Length = 300

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 109/188 (57%), Gaps = 13/188 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF- 246
           K+ +   +L   L + A   +R    +  ++L   Y++  LI  +P L+ +   Y + F 
Sbjct: 81  KVILVGLLLATTLGV-AAGAARSSRNRLVRSLSGGYVA--LIRQVPLLLQLLFWYFVAFL 137

Query: 247 ---DKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
              + PV G  +F        G  +S EF ++   L  +T A IAEIVR G+ AV RGQ 
Sbjct: 138 GLPETPVGGLIHFSNQGIRLLGLNLSVEFCAVLTGLVVFTGASIAEIVRGGINAVSRGQW 197

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  +LGL+     R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I
Sbjct: 198 EAFRSLGLSEGLGLRRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTI 257

Query: 358 NQTGQAIE 365
            QTG+AIE
Sbjct: 258 TQTGRAIE 265



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 60/105 (57%)

Query: 45  VNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGM 104
           +NN+  N+ ++ L L  G+L   AGF + +  +PY    SYA A+ +G++N+  +   G+
Sbjct: 28  INNITVNLIRTGLGLDFGWLWRPAGFALAETALPYAPTDSYAWALFIGWLNSLKVILVGL 87

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + AT +G   GA R S N+LV  +   YV + R +P L+ + F Y
Sbjct: 88  LLATTLGVAAGAARSSRNRLVRSLSGGYVALIRQVPLLLQLLFWY 132


>gi|239909116|ref|YP_002955858.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239798983|dbj|BAH77972.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 247

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/128 (45%), Positives = 84/128 (65%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF    IAL+ YTAAFIAE +RSG+ ++P+ Q+EA+ A GL+  +A   V+LPQA R II
Sbjct: 114 EFACGVIALTVYTAAFIAEEIRSGIFSIPKNQLEASRACGLSFLQAMAYVILPQAFRVII 173

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL SQ+LNL+KNSSL + +G  DL  +   I   T    E   +   IYL++S++++L 
Sbjct: 174 PPLISQFLNLIKNSSLVMTIGVMDLTYMARQIEAHTFHGFEAFTVSTLIYLTISLIVSLG 233

Query: 385 MNRLNAKI 392
           +N  N ++
Sbjct: 234 VNLYNRRV 241



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            E   ++ D G V       Y   IL G   T  ++   ++ +  +GT++   RLS  K 
Sbjct: 12  DESLAYQFDFGQV---VSGEYGQWILSGLGVTLQISGISIVLSLALGTVIAVLRLSKVKP 68

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           + W    + E FRN P LV IFF Y    SVLP
Sbjct: 69  LVWFAASFTEFFRNTPLLVQIFFWYFGSYSVLP 101


>gi|260761547|ref|ZP_05873890.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|260671979|gb|EEX58800.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella
           abortus bv. 2 str. 86/8/59]
          Length = 292

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 73/99 (73%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI GLP L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+
Sbjct: 148 LIIGLPILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRA 207

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           G++ V +GQ EAA A+GL   +  RL+++PQA+R IIPP
Sbjct: 208 GVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPP 246


>gi|260754501|ref|ZP_05866849.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella
           abortus bv. 6 str. 870]
 gi|260674609|gb|EEX61430.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella
           abortus bv. 6 str. 870]
          Length = 280

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 73/99 (73%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI GLP L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+
Sbjct: 148 LIIGLPILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRA 207

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           G++ V +GQ EAA A+GL   +  RL+++PQA+R IIPP
Sbjct: 208 GVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPP 246


>gi|242278993|ref|YP_002991122.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242121887|gb|ACS79583.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 233

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 86/133 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF +  I+L+ YTAAF+AE +R+G+ ++P+ Q+EA+ A GL+  +A R V+LPQA R II
Sbjct: 100 EFAAGVISLTVYTAAFVAEEIRAGINSIPKNQLEASRATGLSFLQAYRYVILPQAFRIII 159

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL SQ LNL+KNSSL + +G  DL  +   I + T    E   +   IYL +S++++L 
Sbjct: 160 PPLISQSLNLIKNSSLVMTIGVMDLTYMARQIESYTFHGFEAFTVATVIYLCISLVVSLM 219

Query: 385 MNRLNAKIALKEK 397
           +N  N    L+ K
Sbjct: 220 INMYNKHFLLQIK 232



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 37/74 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I+ G   T  ++   ++   ++GT+V   R+S  K   W    +VE FRN P L+
Sbjct: 14  QYGQWIIDGVKVTLQISAVSIVFTLLLGTIVAVMRMSKFKPFEWFSFAFVEFFRNTPLLI 73

Query: 144 VIFFLYKSVLSVLP 157
            IFF Y    ++LP
Sbjct: 74  QIFFWYFGSYAILP 87


>gi|120601966|ref|YP_966366.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120562195|gb|ABM27939.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 237

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 14/159 (8%)

Query: 247 DKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           + P+L Q  F + G   V P            EF +  I+L+ YTAAFIAE +RSG+ ++
Sbjct: 72  NTPLLVQIFFWYFGSDAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFIAEEIRSGIFSI 131

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PR Q+EA+ A GL+  +A   V+LPQA R I+PPL SQ LNL KNSSL + +G  +L  +
Sbjct: 132 PRTQLEASRACGLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYM 191

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I + T    E   +   IYL +S+M++L +N  N  
Sbjct: 192 ARQIESYTFHGFEAFTVSTLIYLCISLMVSLLINLYNTH 230



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T  L+   ++ A ++GTL+   RLS  +   W    + E FRN P LV IFF 
Sbjct: 23  IVQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAFTEFFRNTPLLVQIFFW 82

Query: 149 YKSVLSVLP 157
           Y    +VLP
Sbjct: 83  YFGSDAVLP 91


>gi|260435752|ref|ZP_05789722.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109]
 gi|260413626|gb|EEX06922.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109]
          Length = 296

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 78/107 (72%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S EF ++ + L+ +T A IAEIVR G+ AVPRGQ EA  +LGL      R ++LPQ
Sbjct: 155 GLNLSVEFCAVLVGLTVFTGASIAEIVRGGINAVPRGQWEAFRSLGLGEGLGLRRIVLPQ 214

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE
Sbjct: 215 ALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 261



 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 87/165 (52%), Gaps = 8/165 (4%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
           MR   + VQ+ +A +L       VNN+  N+ ++ L LG G+L   AGF + +  +PY  
Sbjct: 1   MRQRRLLVQVGVAAVLLGFLALLVNNLAVNLIRTGLGLGFGWLGRPAGFALAETALPYAP 60

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             SY  A+ +G++N+  +  +G++ AT +G   GA R   N+L+  +   YV + R +P 
Sbjct: 61  SDSYLWALTIGWLNSLKVIAAGLVLATGLGVAAGAARGGNNRLLRSLAGGYVALIRQVPL 120

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFG--MFLNNRGLSFPTLTMD 184
           L+ + F Y   ++ L +P     +P G  + L+N+G+    L + 
Sbjct: 121 LLQLLFWY--FVAFLGLPS----MPIGGLIRLSNQGIQLLGLNLS 159


>gi|46580746|ref|YP_011554.1| amino acid ABC transporter permease [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450166|gb|AAS96814.1| amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234460|gb|ADP87314.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 233

 Score =  109 bits (272), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/159 (40%), Positives = 91/159 (57%), Gaps = 14/159 (8%)

Query: 247 DKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           + P+L Q  F + G   V P            EF +  I+L+ YTAAFIAE +RSG+ ++
Sbjct: 68  NTPLLVQIFFWYFGSDAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFIAEEIRSGIFSI 127

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PR Q+EA+ A GL+  +A   V+LPQA R I+PPL SQ LNL KNSSL + +G  +L  +
Sbjct: 128 PRTQLEASRACGLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYM 187

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I + T    E   +   IYL +S+M++L +N  N  
Sbjct: 188 ARQIESYTFHGFEAFTVSTLIYLCISLMVSLLINLYNTH 226



 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T  L+   ++ A ++GTL+   RLS  +   W    + E FRN P LV IFF 
Sbjct: 19  IVQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAFTEFFRNTPLLVQIFFW 78

Query: 149 YKSVLSVLP 157
           Y    +VLP
Sbjct: 79  YFGSDAVLP 87


>gi|218888236|ref|YP_002437557.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759190|gb|ACL10089.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 233

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 247 DKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           + P+L Q  F + G   V P            EF +  I+L+ YTAAFIAE +RSG+ ++
Sbjct: 68  NTPLLVQIFFWYFGSDAVLPTAVNQWLYKQNFEFAAGVISLAVYTAAFIAEEIRSGIFSI 127

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PR Q+EA+ A GLT  +A R V+LPQA R I+PPL SQ LNL KNSSL + +G  +L  +
Sbjct: 128 PRTQLEASRACGLTFLQAMRYVVLPQAFRIIVPPLISQALNLFKNSSLCMTIGVMELTYM 187

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
              I + T    E   +   IYL++S++++  + + N
Sbjct: 188 ARQIESYTFHGFEAFTVSTLIYLTISLLVSFSITQYN 224



 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   I+ G V T  ++   ++ A  +GTL+   RLSA + + W    + E FRN P 
Sbjct: 12  SGEYLQWIIDGVVVTCQISALSLVLAMALGTLIAVMRLSAVRPLVWFSAGFTEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV IFF Y    +VLP
Sbjct: 72  LVQIFFWYFGSDAVLP 87


>gi|167628827|ref|YP_001679326.1| glutamine abc transporter, permease protein [Heliobacterium
           modesticaldum Ice1]
 gi|167591567|gb|ABZ83315.1| glutamine abc transporter, permease protein [Heliobacterium
           modesticaldum Ice1]
          Length = 221

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 121/214 (56%), Gaps = 13/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  K+   S ++G V+ LF   L+R  H +  + +  +Y  T +I G P LV I   + +
Sbjct: 21  TTVKVTAISVMIGTVIGLFIA-LARLSHWRLLRWVAAIY--TDVIRGTPLLVQI---FIV 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H   P L     IG S   P   S  IALS  + A++AEI R+G+ ++ +GQMEA+ +LG
Sbjct: 75  HLGAPKL-----IGQSL--PAMTSGLIALSVNSGAYVAEIFRAGIQSIDKGQMEASRSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++ +A R V+LPQA R +IPPL ++++ +LK+SSL   +   +L   G T++  T +  
Sbjct: 128 MSYGQAMRFVILPQAFRRVIPPLGNEFIAMLKDSSLVSVISLPELTMAGRTVLGSTARVW 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  L    IYL+L+++ +  +     K+++K  +
Sbjct: 188 EAWLPVAAIYLTLTLLFSRLVAWYEQKLSVKSHR 221



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 34/67 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             YA   L+G   T  +    ++  T+IG  +   RLS  +L+ W+  +Y +V R  P L
Sbjct: 9   QDYADLFLMGGWTTVKVTAISVMIGTVIGLFIALARLSHWRLLRWVAAIYTDVIRGTPLL 68

Query: 143 VVIFFLY 149
           V IF ++
Sbjct: 69  VQIFIVH 75


>gi|258406274|ref|YP_003199016.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798501|gb|ACV69438.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 233

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 120/223 (53%), Gaps = 39/223 (17%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A   V S V+G ++++F  RLS        K  PL + S              L 
Sbjct: 26  TLQISAVSIVLSLVVGTIIAVF--RLS--------KVKPLEWFS--------------LA 61

Query: 242 YQLHF-DKPVLGQ--FNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVR 286
           Y   F + P+L Q  F + G ++V P+F++ +            IAL+ YT+AFIAE +R
Sbjct: 62  YTEFFRNTPLLIQIFFWYFGSNSVLPQFVNEWLYEQNFEFAAGVIALTVYTSAFIAEEIR 121

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ ++P+ Q+E+A A GLT  ++ R ++LPQA R IIPPL SQ+LNL KNSSL + +G 
Sbjct: 122 SGIFSIPKTQLESARASGLTFIQSMRFIILPQAYRIIIPPLISQFLNLTKNSSLVMTIGV 181

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            DL  +   I + T    E   +   +Y+ +S++I+  +   N
Sbjct: 182 MDLTYMARQIESYTFHGFEAFTVATVLYICISLVISFVVTMYN 224



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   I+ G + T  ++   ++ + ++GT++   RLS  K + W    Y E FRN P 
Sbjct: 12  SGEYGEWIIQGLITTLQISAVSIVLSLVVGTIIAVFRLSKVKPLEWFSLAYTEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLP 157
           L+ IFF Y    SVLP
Sbjct: 72  LIQIFFWYFGSNSVLP 87


>gi|283853864|ref|ZP_06371080.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283570739|gb|EFC18783.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 233

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/128 (44%), Positives = 83/128 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF    IAL+ YTAAFIAE +RSG+ ++P+ Q+EA+ A GL+  +A   V+LPQA R II
Sbjct: 100 EFACGVIALTVYTAAFIAEEIRSGIFSIPKNQLEASRACGLSFVQAMGYVILPQAFRVII 159

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL SQ+LNL+KNSSL + +G  DL  +   I   T    E   +   +YL++S+ ++L 
Sbjct: 160 PPLISQFLNLIKNSSLVMTIGVMDLTYMARQIEAHTFHGFEAFTVSTCMYLAISLTVSLG 219

Query: 385 MNRLNAKI 392
           +N  N ++
Sbjct: 220 VNIYNRRV 227



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ G V T  ++   ++ +  +GTLV   RLS  + + WI   + E FRN P 
Sbjct: 12  SGEYGQWLVSGLVTTLKISSLSIVLSLGLGTLVAVLRLSKVRPLVWISAGFTEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV IFF Y    S+LP
Sbjct: 72  LVQIFFWYFGSYSILP 87


>gi|325284208|ref|YP_004256749.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus proteolyticus MRP]
 gi|324316017|gb|ADY27132.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus proteolyticus MRP]
          Length = 219

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 122/221 (55%), Gaps = 23/221 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVL 237
           LT+   A   V   +LG +L+L   RLS           PL +++T    LI G P LV 
Sbjct: 19  LTLQVTAIALVAGTILGTLLAL--ARLS--------PIKPLAWLATAYIELIRGTPLLVQ 68

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           I L Y   F  P       I G+ + P F +  +A S  +AA++AEI+RSG+  VPRGQ 
Sbjct: 69  IFLIY---FGLPQ------ITGTNLEP-FPAGVLAFSLNSAAYVAEIMRSGIQGVPRGQT 118

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA+++LG + R   R ++LPQA R ++PPL ++ LNLLKN+SL  ++   +L   G  + 
Sbjct: 119 EASLSLGFSPRDTMRYIVLPQAFRRVLPPLVNEALNLLKNTSLLSSIALVELTRAGQIVA 178

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++ +  E+ L    +YL+++++++   +RL  +    E++
Sbjct: 179 ARSYKPFEMYLAIALVYLAMTMVLSFLSSRLEKRWGEGERR 219



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++  TI+GTL+   RLS  K +AW+   Y+E+ R  P LV IF +
Sbjct: 13  LLQGAVLTLQVTAIALVAGTILGTLLALARLSPIKPLAWLATAYIELIRGTPLLVQIFLI 72

Query: 149 Y 149
           Y
Sbjct: 73  Y 73


>gi|256829598|ref|YP_003158326.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578774|gb|ACU89910.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 334

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 122/213 (57%), Gaps = 13/213 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++ +A   VF    GI+L LF T L+R       +   + YI   LI G P LV I L
Sbjct: 131 LTLEVSALAIVF----GILLGLF-TGLARISDNPALRWGAIAYIE--LIRGSPLLVQIFL 183

Query: 241 KYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            Y +       +L Q+   G   + P +  + +AL+ +T A+ AEIVR+G+ +V RGQME
Sbjct: 184 WYFVVGTVINSMLSQY---GIGQIPPLWFGV-MALAIFTGAYTAEIVRAGIQSVHRGQME 239

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LG+T+ KA R V+LPQA R I+PPL  Q+++L+K+SSL   +   +L      +++
Sbjct: 240 AARSLGMTYNKAMRKVILPQAFRRILPPLAGQFISLVKDSSLLGVISIRELTKASREVVS 299

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            + Q  EI ++   +YL L+  +++F+  L  K
Sbjct: 300 SSLQPFEIWIVCAILYLVLTFTLSMFVQYLERK 332


>gi|260881503|ref|ZP_05404565.2| glutamine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
 gi|260848606|gb|EEX68613.1| glutamine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
          Length = 221

 Score =  107 bits (266), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 123/225 (54%), Gaps = 19/225 (8%)

Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGL 232
           SFP L +      KI   S  LG+V+ LF    R+SR    K  + L  +Y+  F   G 
Sbjct: 11  SFPLLLVGAGVTIKITALSVALGVVIGLFVGIARISRI---KLLRVLAAIYVDFFR--GT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I L Y   F  PV      I G  V P F++   +    + A++AEI R+G+ ++
Sbjct: 66  PLLVQIFLVY---FALPV------ITGQRVDP-FVAAIGSCGINSGAYVAEIFRAGIQSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEA  +LG+T  +  R +++PQA + +IPPL ++++ LLK+SSL   +GF +L   
Sbjct: 116 DKGQMEAGRSLGMTWVQTMRYIIVPQAFKRVIPPLGNEFIALLKDSSLVSVIGFEELTRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  II +T  ++EI L    IYL++++ I+ F+  L  +    ++
Sbjct: 176 GQLIIAKTYGSLEIWLSVAVIYLAMTLTISRFVAYLERRYKTDDR 220



 Score = 37.0 bits (84), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
             +IG  VG  R+S  KL+  +  +YV+ FR  P LV IF +Y +    LP+     V P
Sbjct: 33  GVVIGLFVGIARISRIKLLRVLAAIYVDFFRGTPLLVQIFLVYFA----LPVITGQRVDP 88

Query: 167 FGMFLNNRGLS 177
           F   + + G++
Sbjct: 89  FVAAIGSCGIN 99


>gi|229010072|ref|ZP_04167286.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
 gi|228751205|gb|EEM01017.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
          Length = 218

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 126/207 (60%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SFVLGIV+++      R  +   G A    Y+    +  +P LVLIA  +  +F  PV+G
Sbjct: 32  SFVLGIVMAVMRISPIRILNW-IGSA----YVE--FVRNIP-LVLIAFIF--YFALPVIG 81

Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             FN F+ G+          +AL+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A
Sbjct: 82  ITFNGFVAGT----------VALTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLVLTIPLSMLVRYLEKRLA-KE 216



 Score = 36.2 bits (82), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T   +   +I + ++G ++   R+S  +++ WI   YVE  RNI PLV+I F++
Sbjct: 15  LEGFKYTVMSSVVALIGSFVLGIVMAVMRISPIRILNWIGSAYVEFVRNI-PLVLIAFIF 73

Query: 150 KSVLSVLPI 158
              L V+ I
Sbjct: 74  YFALPVIGI 82


>gi|163938564|ref|YP_001643448.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|229131584|ref|ZP_04260467.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
 gi|163860761|gb|ABY41820.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|228651875|gb|EEL07829.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
          Length = 218

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 126/207 (60%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SFVLGIV+++      R  +   G A    Y+    +  +P LVLIA  +  +F  PV+G
Sbjct: 32  SFVLGIVMAVMRISPIRILNW-IGSA----YVE--FVRNIP-LVLIAFIF--YFALPVIG 81

Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             FN F+ G+          +AL+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A
Sbjct: 82  ITFNGFVAGT----------VALTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLVLTIPLSMLVRYLEKRLA-KE 216



 Score = 36.2 bits (82), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T   +   +I + ++G ++   R+S  +++ WI   YVE  RNI PLV+I F++
Sbjct: 15  LEGFKYTVMSSVVALIGSFVLGIVMAVMRISPIRILNWIGSAYVEFVRNI-PLVLIAFIF 73

Query: 150 KSVLSVLPI 158
              L V+ I
Sbjct: 74  YFALPVIGI 82


>gi|229165584|ref|ZP_04293359.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH621]
 gi|228617891|gb|EEK74941.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH621]
          Length = 218

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 107/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G  FN F+ G+          +AL+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITFNGFVAGT----------VALTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLVLTIPLSMLVRYLEKRLA-KE 216



 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T   +   +I + ++G ++   R+S  +++ WI   YVE  RNI PLV+I F++
Sbjct: 15  LEGFKYTVMSSVVALIGSFVLGIIMAVMRISPIRILNWIGSAYVEFVRNI-PLVLIAFIF 73

Query: 150 KSVLSVLPI 158
              L V+ I
Sbjct: 74  YFALPVIGI 82


>gi|242278994|ref|YP_002991123.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242121888|gb|ACS79584.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 231

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 18/207 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F +G+   L   RLSR+   +  K + ++YI   +I G+P L+LI   +  +F  PV+ 
Sbjct: 40  AFWIGLAAGLM--RLSRN---RAVKTVSVIYIE--VIRGVPLLMLI---FWFYFLAPVV- 88

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               +G S   PEF    IA   +T A+I EIV++G+IA+PRGQMEAA   GL+H +A R
Sbjct: 89  ----LGRSL--PEFHCALIAFIVFTGAYIGEIVKAGVIALPRGQMEAARGTGLSHVQAMR 142

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWM 371
            V+LPQA+R++IP   +Q+++L K++SLA  +G  +L      + N+T  A  EI +   
Sbjct: 143 YVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVNELTRTATQVNNRTLSAPTEIFITIA 202

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            +Y  +  ++     R+ A +A  + +
Sbjct: 203 ILYFIVCYVLTWASRRMEAHMAKYQAR 229



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 30/51 (58%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LA  G+  A  IG   G  RLS N+ V  +  +Y+EV R +P L++IF+ Y
Sbjct: 32  LALLGIFGAFWIGLAAGLMRLSRNRAVKTVSVIYIEVIRGVPLLMLIFWFY 82


>gi|320334507|ref|YP_004171218.1| polar amino acid ABC transporter inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
 gi|319755796|gb|ADV67553.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
          Length = 272

 Score =  105 bits (263), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 83/132 (62%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            PE  ++  ALS YT+++IAE +R+G+ ++P GQ EAA +LGL      RLV+LPQA R 
Sbjct: 136 QPEQWAVIAALSVYTSSYIAETIRAGIQSIPHGQTEAAQSLGLGGLDTLRLVILPQAFRV 195

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PPL SQ+LNL KNSSLA  +G A+L   G  + + T +  E I      YL LS+ I 
Sbjct: 196 VLPPLGSQFLNLTKNSSLASQIGVAELFYYGTQVQSYTFRGFESITAITIAYLILSLAIT 255

Query: 383 LFMNRLNAKIAL 394
             +N L A++ L
Sbjct: 256 GLLNLLMARLHL 267



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 10/133 (7%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
            + + Q+I   LL + F + V  V+    ++N++L      + +            +  +
Sbjct: 3   RDTTQQLIAGALLILAFGFIVWQVHAGFARNNVTLDWSIFGKPSQL----------TSGT 52

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL+G   T  LA   +  A ++GT+VG  RLSAN +V      YVE FRN P LV 
Sbjct: 53  YLTTILIGMWLTVRLALISIALALLLGTVVGVARLSANPVVRTAASAYVEFFRNTPLLVQ 112

Query: 145 IFFLYKSVLSVLP 157
           IFF    VL+VLP
Sbjct: 113 IFFWNFGVLNVLP 125


>gi|323498512|ref|ZP_08103505.1| polar amino acid ABC transporter inner membrane subunit [Vibrio
           sinaloensis DSM 21326]
 gi|323316401|gb|EGA69419.1| polar amino acid ABC transporter inner membrane subunit [Vibrio
           sinaloensis DSM 21326]
          Length = 315

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  KI ++S V+ + L L    L R       K L ++YI   +I G P LV I + Y  
Sbjct: 119 TTVKISLWSLVIALALGL-VIGLMRISSNPALKKLSIVYIE--IIRGTPLLVQIFIVY-- 173

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      FIG       F +  IALS +TAA++AEIVRSG+ ++P+GQMEAA +LG
Sbjct: 174 ----------FFIGTVLDLERFTAGVIALSVFTAAYVAEIVRSGIQSIPKGQMEAARSLG 223

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + + KA   V+LPQA +  +PPL  Q++NL+K+SSL   +   DL   G  +++ +    
Sbjct: 224 MNYPKAMIYVILPQAFKQTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPF 283

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E+      +YL L+  ++  +  L  ++A  +
Sbjct: 284 EVWFTVAALYLILTSGLSWAIQTLEKRLAASD 315



 Score = 36.6 bits (83), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  ++   ++ A  +G ++G  R+S+N  +  +  VY+E+ R  P LV IF +
Sbjct: 113 ILEGVITTVKISLWSLVIALALGLVIGLMRISSNPALKKLSIVYIEIIRGTPLLVQIFIV 172

Query: 149 Y 149
           Y
Sbjct: 173 Y 173


>gi|229015971|ref|ZP_04172932.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1273]
 gi|229022188|ref|ZP_04178738.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1272]
 gi|228739119|gb|EEL89565.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1272]
 gi|228745331|gb|EEL95372.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1273]
          Length = 218

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 107/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G  FN F+ G+          +AL+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITFNGFVAGT----------VALTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|170516838|gb|ACB15240.1| glutamine transport system permease protein GlnP [uncultured marine
           group II euryarchaeote DeepAnt-15E7]
          Length = 681

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 101/148 (68%), Gaps = 4/148 (2%)

Query: 247 DKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           D P  G ++   G+   ++P F+++ + L+ +TA+ +AEIVR  + A+PRGQ+EAAI++G
Sbjct: 531 DAP--GSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPRGQVEAAISVG 588

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  RLV++PQA+RS++P L +Q++N+ KNSSLAV V ++D+  V   ++N  G+ I
Sbjct: 589 LNPYQRLRLVIMPQALRSMVPLLNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLI 648

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + L+ +  Y + S+ I++ MN  N+++
Sbjct: 649 PLFLLLLITYQAGSLAISVVMNWYNSRV 676



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 12/144 (8%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL-VGFVNTFWLAFSGMIPAT 108
           N + ++  ++   F+ +   F+I+   +   ++S      L    +N+  +    ++   
Sbjct: 239 NPVMQNRWAVNFDFMDKVNTFKINPWPMEVVANSDARWLFLKAAIINSVRVTLLSIVLCV 298

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP---DHSIVL 165
           I+GT+VG  RLS+NKL + +  VYVEVFRN+ PL V+ FL  +    L  P   + + + 
Sbjct: 299 ILGTIVGVTRLSSNKLASTMATVYVEVFRNL-PLAVLLFLISTQFG-LQAPLFIEETFLF 356

Query: 166 PFGMFLNNRGL------SFPTLTM 183
              +F +N+G+      S+P L M
Sbjct: 357 GGAVFYSNQGIWFVTVGSYPVLVM 380


>gi|332098821|gb|EGJ03778.1| general L-amino acid transport system permease protein aapQ
           [Shigella boydii 3594-74]
          Length = 155

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 84/141 (59%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL+NRGL  P+  +      F+ + V+ IVLS+   R ++ +  KTG+       +  LI
Sbjct: 8   FLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPFAAVLI 67

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIAEI+R+G+
Sbjct: 68  IGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGI 127

Query: 290 IAVPRGQMEAAIALGLTHRKA 310
            AVP GQ EAA +LGL + ++
Sbjct: 128 QAVPYGQHEAARSLGLRYARS 148


>gi|303246864|ref|ZP_07333141.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491881|gb|EFL51761.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 233

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 11/202 (5%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIAL 240
           T+  +A   V S VLG ++++   RLS        K  PL++ S T+  F   T +L+ +
Sbjct: 26  TLKISAVSIVLSLVLGTLVAVM--RLS--------KVRPLVWASATYTEFFRNTPLLVQI 75

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +       VL QF          EF    IAL+ YT+AFIAE +RSG+ ++P+ Q+EA+
Sbjct: 76  FFWYFGSYNVLPQFVNDWLYKQDFEFACGVIALTVYTSAFIAEEIRSGVFSIPKNQLEAS 135

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A GL+  +A   V+LPQA R IIPPL SQ+LNL+KNSSL + +G  DL  +   I   T
Sbjct: 136 RACGLSFTQAMVYVILPQAFRVIIPPLISQFLNLIKNSSLVMTIGVMDLTYMARQIEAHT 195

Query: 361 GQAIEIILIWMFIYLSLSIMIA 382
               E   +   +YL +S++++
Sbjct: 196 FHGFEAFTVTTCMYLCISLVVS 217



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   ++ G V T  ++   ++ + ++GTLV   RLS  + + W    Y E FRN P LV
Sbjct: 14  EYGQWLVTGLVTTLKISAVSIVLSLVLGTLVAVMRLSKVRPLVWASATYTEFFRNTPLLV 73

Query: 144 VIFFLYKSVLSVLP 157
            IFF Y    +VLP
Sbjct: 74  QIFFWYFGSYNVLP 87


>gi|218887871|ref|YP_002437192.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758825|gb|ACL09724.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 596

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 87/131 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF    I LS YTA+F+AE++R+GL ++P+G +EAA + GL++ +  R ++LP A R+II
Sbjct: 138 EFWCATIGLSIYTASFMAEVIRAGLQSIPKGLLEAAYSSGLSYFQVLRTIILPLAFRAII 197

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL S++LN +KNSSLA+ VG A+L      + + T +  E       +YLSLS++I+  
Sbjct: 198 PPLGSEFLNNMKNSSLAMVVGVAELTWHAQQVESLTFKGFEATSAATVLYLSLSLIISFI 257

Query: 385 MNRLNAKIALK 395
           +N +N ++ L 
Sbjct: 258 LNGVNGRMRLD 268



 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 126/232 (54%), Gaps = 21/232 (9%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           P  MFL   GL++  L       +   SF +G+ + +  +  +R F         LLYI 
Sbjct: 380 PDEMFLGLGGLAYSLLMAVIAISV---SFFIGLAVGVGRSSSNRVFRIPC-----LLYIE 431

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             LI G P +++I   + ++F  PV+       G+T++  F S   AL+ +T A+IAEIV
Sbjct: 432 --LIRGNPLIIVI---FWVYFFIPVMF------GTTLN-VFWSATWALTAFTGAYIAEIV 479

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  +P GQ+EAA + GLT+ +A R ++LPQA++ +IP +  Q++ + K++SLA  +G
Sbjct: 480 RTGIQNIPAGQVEAAYSTGLTYLQAMRRIVLPQALKQMIPAIVGQFIAIFKDTSLAFVLG 539

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L  V   I N+     +EI     F+Y      +++F  RL  +++ ++
Sbjct: 540 VLELTFVAQGINNRLMIHPMEIYGTVAFLYFICCYSMSVFAARLERRLSPEK 591



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IG  VG GR S+N++    C +Y+E+ R  P ++VIF++Y
Sbjct: 407 IGLAVGVGRSSSNRVFRIPCLLYIELIRGNPLIIVIFWVY 446



 Score = 36.6 bits (83), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)

Query: 69  GFEIDQGIVPYTSDSSYA----TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G+E    ++ +T + +Y       IL G  NT  ++      A ++GT++G  RLS  + 
Sbjct: 34  GYEFKWSML-FTRNETYGVVMGAEILKGLANTVRISLISSALALLLGTMLGLARLSLFRP 92

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +       +E FRN P L+ +FF Y +  ++LP
Sbjct: 93  LRVTATCVIEFFRNTPLLIQLFFWYFAFPAILP 125


>gi|58336907|ref|YP_193492.1| glutamine ABC transporter permease [Lactobacillus acidophilus NCFM]
 gi|227903465|ref|ZP_04021270.1| glutamine ABC superfamily ATP binding cassette transporter permease
           [Lactobacillus acidophilus ATCC 4796]
 gi|58254224|gb|AAV42461.1| glutamine ABC transporter permease [Lactobacillus acidophilus NCFM]
 gi|227868785|gb|EEJ76206.1| glutamine ABC superfamily ATP binding cassette transporter permease
           [Lactobacillus acidophilus ATCC 4796]
          Length = 213

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 116/204 (56%), Gaps = 20/204 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG+V +L           K G+ +  +YI  F    +P LV++ + Y L   + +
Sbjct: 28  IFSLILGVVFALLEVA-----PPKFGRVIAKIYIEVFR--NIPLLVIVMIFY-LIVPRYI 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VRSG+ ++  GQME A++ G+T+ +A
Sbjct: 80  VKLSGFQAGT----------IGLTLYTSAFIAETVRSGINSIGEGQMEGALSNGMTYTQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQAM+ +IPPL +Q++NL+KNSS LA   GF DL+     I   T + I+  +I
Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYII 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL L++ ++ +M  L  K+A
Sbjct: 189 VGLFYLILTMPLSYYMRHLEKKMA 212



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           + L GF NT   +   +I + I+G +     ++  K    I ++Y+EVFRNIP LV++  
Sbjct: 11  SFLTGFWNTILCSIIALIFSLILGVVFALLEVAPPKFGRVIAKIYIEVFRNIPLLVIVMI 70

Query: 148 LY 149
            Y
Sbjct: 71  FY 72


>gi|302390115|ref|YP_003825936.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermosediminibacter oceani DSM 16646]
 gi|302200743|gb|ADL08313.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermosediminibacter oceani DSM 16646]
          Length = 220

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 25/239 (10%)

Query: 160 DHSIVLPF-GMFLNNRGLSFPTLTMDTNAKIFVFSFV-LGIVLSLFATRLSRHFHEKTGK 217
           D SIVLP+  +F      +     +     IF+ +FV +G +  +F  +     + +  +
Sbjct: 5   DFSIVLPYINLFFKGALTAIEITLLAVLIGIFIGTFVGMGKMSRVFILKFICSAYVEVIR 64

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             PLL       FGLP ++                      G T+ PEF +  +AL   +
Sbjct: 65  GTPLLVQLLIFYFGLPQIL----------------------GFTI-PEFTAAVLALGINS 101

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++AEIVR G++AV RGQMEAA +LG++H +A R ++LPQA + +IPPL ++++ LLKN
Sbjct: 102 GGYVAEIVRGGILAVDRGQMEAARSLGMSHAQAMRYIILPQAFKKMIPPLGNEFITLLKN 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SSLA  +GF++L      +   T +  E  L     Y  +++  +  +  L  ++A  +
Sbjct: 162 SSLATTIGFSELTRAAQIVAGNTYKPFEPYLTAAAFYFIMTLGFSWILGVLERRLAAGD 220



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL--PIPDHS 162
           IGT VG G++S   ++ +IC  YVEV R  P LV +   Y  +  +L   IP+ +
Sbjct: 37  IGTFVGMGKMSRVFILKFICSAYVEVIRGTPLLVQLLIFYFGLPQILGFTIPEFT 91


>gi|193084367|gb|ACF10023.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote AD1000-18-D2]
          Length = 710

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 99/148 (66%), Gaps = 4/148 (2%)

Query: 247 DKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           D P  G ++   G+   ++P F+++ + L+ +TA+ +AEIVR  + A+PRGQ+EAAI+L 
Sbjct: 560 DAP--GSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPRGQVEAAISLA 617

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  RLV+LPQA+RS++P + +Q++N+ KNSSLAV V ++D+  V   ++N  G+ I
Sbjct: 618 LNPFQRLRLVILPQALRSMVPLMNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLI 677

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + ++ +  Y + S+ I+L MN  N ++
Sbjct: 678 PLFILLLITYQAGSLAISLVMNWYNTRV 705



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI-PDHSIVLPF 167
           I+GT+VG  RLS+NKL + +  VYVE+FRN+P  V++F +        P+  +   +   
Sbjct: 329 ILGTIVGVTRLSSNKLASTMATVYVEIFRNLPLAVLLFLIATQYGIQAPLFIEERFLFGG 388

Query: 168 GMFLNNRGLSFPTL 181
            +F +N+G+ F T+
Sbjct: 389 AVFYSNQGIWFVTV 402


>gi|49476851|ref|YP_034899.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|196035738|ref|ZP_03103141.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|228932068|ref|ZP_04094960.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228944393|ref|ZP_04106766.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|49328407|gb|AAT59053.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|195991705|gb|EDX55670.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|228815295|gb|EEM61543.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228827651|gb|EEM73393.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 218

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 123/207 (59%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LG+VL++      R  +          ++ T L+  +  + L+ + +  +F  PV+G
Sbjct: 32  SFILGVVLAIMRIAPIRILN----------WLGTALVEFVRNIPLVLIAFIFYFALPVVG 81

Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              N F+ G+          + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A
Sbjct: 82  ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|17546977|ref|NP_520379.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17429278|emb|CAD15965.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 231

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 21/210 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           L++   A  FV +  L I ++L         R     + +  + +PLL    F  FG P 
Sbjct: 24  LSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQAYVEAIRNVPLLAHMLFWYFGAPQ 83

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ +++K  L+         N+   S V        IAL  YTAA++AE +RSGL ++P+
Sbjct: 84  LLPMSVKTWLY-------NLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIPK 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EA+ ALGL+  +A RLV+LPQ++R  +PPL SQ LNL KNSS+A+ +G A+L+    
Sbjct: 129 EQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            + + T +  E        YLS+S+ I +F
Sbjct: 189 QVESATFRGFEAFAFATAAYLSISMAITVF 218


>gi|91224517|ref|ZP_01259779.1| hypothetical amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 12G01]
 gi|269968272|ref|ZP_06182298.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91190859|gb|EAS77126.1| hypothetical amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 12G01]
 gi|269827129|gb|EEZ81437.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 315

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 15/182 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  KI ++S ++ + L L    L R       K L L+Y+   +I G P LV I + Y  
Sbjct: 119 TTIKISLWSLIIALALGL-VVGLMRISSNPALKKLALVYVE--VIRGTPLLVQIFIVY-- 173

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      FIG       F +  IALS +TAA++AEIVRSG+ ++PRGQMEAA +LG
Sbjct: 174 ----------FFIGTVLDLERFTAGVIALSVFTAAYVAEIVRSGIQSIPRGQMEAARSLG 223

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + + KA   V+LPQA +  +PPL  Q++NL+K+SSL   +   DL   G  +++ +    
Sbjct: 224 MNYPKAMIYVILPQAFKQTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPF 283

Query: 365 EI 366
           E+
Sbjct: 284 EV 285



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G V T  ++   +I A  +G +VG  R+S+N  +  +  VYVEV R  P LV IF +
Sbjct: 113 ILDGVVTTIKISLWSLIIALALGLVVGLMRISSNPALKKLALVYVEVIRGTPLLVQIFIV 172

Query: 149 Y 149
           Y
Sbjct: 173 Y 173


>gi|258406150|ref|YP_003198892.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798377|gb|ACV69314.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 598

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/132 (40%), Positives = 89/132 (67%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF S  + L+ YT++F+AE++R+G+ ++P+G +EAA + GLT+ +A R V+LP A R+II
Sbjct: 140 EFWSATLGLAIYTSSFMAEVIRAGVQSIPKGLLEAAYSSGLTYFQALRTVILPLAFRAII 199

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL S++LN +KNSSLA+ VG A+L      I + T +  E       +YL LS+ I+  
Sbjct: 200 PPLGSEFLNNMKNSSLAMVVGVAELTWQSQQIESLTFRGFEATTGATVLYLGLSLAISGL 259

Query: 385 MNRLNAKIALKE 396
           +N +N ++ +++
Sbjct: 260 LNMINTRLRIED 271



 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 59/94 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IAL+ +T A+IAEIVR G+  +P GQ EAA   GL +    R ++LPQA++ +IP
Sbjct: 462 FWSATIALTIFTGAYIAEIVRGGIQNIPPGQFEAAYGTGLGYWSTMRHIVLPQALKQMIP 521

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +  Q++ + K++SLA  +G  +L  V   + N+
Sbjct: 522 AIVGQFIAIFKDTSLAFVIGVLELTFVAQGLNNR 555



 Score = 43.1 bits (100), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IG +VG GR+S N+++   C VY+EV R  P ++VIF++Y
Sbjct: 409 IGLIVGLGRMSKNRILRLPCMVYIEVIRGNPLIIVIFWVY 448



 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +GT+ G GRLS+ K        YVE FRN P LV +FF Y ++   LP
Sbjct: 80  LGTVFGLGRLSSFKPFYLFSTWYVEFFRNTPLLVQLFFWYFALPKALP 127


>gi|227530174|ref|ZP_03960223.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227349927|gb|EEJ40218.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 212

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 83/124 (66%), Gaps = 2/124 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE VR+G+ +V  GQ+E A+A GLTH +A R ++LPQA R +IPPL +Q
Sbjct: 90  IGLTLYTSAFIAETVRAGINSVEGGQLEGALANGLTHGQAMRYIILPQAFRVVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I N T Q +    I   +YL +++ ++ +M  L 
Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYEGNLIANDTLQTMPTYFIVGVLYLIITLPLSYYMRHLE 208

Query: 390 AKIA 393
            K+A
Sbjct: 209 KKLA 212



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI--F 146
           +L G  NT   +   ++ + IIGT      +S  ++V  I  +YVEVFRNIP LV+   F
Sbjct: 12  LLSGLWNTILCSLIALVGSLIIGTFFALLEISKYRIVRLIGSIYVEVFRNIPLLVIAMGF 71

Query: 147 FL 148
           FL
Sbjct: 72  FL 73


>gi|300703461|ref|YP_003745063.1| amino acid transmembrane ABC transporter protein [Ralstonia
           solanacearum CFBP2957]
 gi|299071124|emb|CBJ42436.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum CFBP2957]
          Length = 231

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 21/210 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           L++  +   FV +  LGIV++L         R     + +  + +PLL    F  FG P 
Sbjct: 24  LSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQAYVEAIRNVPLLAHMLFWYFGAPQ 83

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+  A++  L+         N+   S V        IAL  YTAA++AE +RSGL ++P+
Sbjct: 84  LLPNAIRTWLY-------DLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIPK 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+EA+ ALGL+  +A R V+LPQ++R  +PPL SQ LNL KNSS+A+ +G A+L+    
Sbjct: 129 EQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYEAQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            + + T +  E        YL++SI I +F
Sbjct: 189 QVESATFRGFEAFAFATAAYLTISIAITVF 218


>gi|78356475|ref|YP_387924.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218880|gb|ABB38229.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 233

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 53/125 (42%), Positives = 83/125 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF +  IAL+ YTAAFIAE +RSG+ A+P+ Q+E++ A GL+  ++ R V+LPQA R I+
Sbjct: 100 EFAAGVIALTVYTAAFIAEEIRSGINAIPKTQLESSRACGLSFLQSMRYVILPQAFRIIV 159

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL SQ LNL+KNSSL + +G A+L  +   + + T +  E   +   +YL +S+ ++  
Sbjct: 160 PPLISQALNLIKNSSLCMTIGVAELTYMTRQVESYTFRGFEAFTVATLVYLCISLAVSFT 219

Query: 385 MNRLN 389
           + + N
Sbjct: 220 VTQYN 224



 Score = 39.7 bits (91), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I+ G + T  ++   +  A ++GT++   RLS  +   W    + E FRN P LV
Sbjct: 14  EYREWIIDGVLLTLKISAVSLFLALVLGTVIAVMRLSRIRPFVWFSAGFTEFFRNTPLLV 73

Query: 144 VIFFLYKSVLSVLPIP 159
            IFF Y     +LP P
Sbjct: 74  QIFFWYFGSDGLLPRP 89


>gi|299066139|emb|CBJ37322.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 231

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 21/210 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           L++   A  FV +  L I ++L         R     + +  + +PLL    F  FG P 
Sbjct: 24  LSIKLTALAFVLALPLAIAVALLRLAPAAPLRAIGQTYVEAIRNVPLLAHMLFWYFGAPQ 83

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ +++K  L+         N+   S V        IAL  YTAA++AE +RSGL ++P+
Sbjct: 84  LLPMSVKTWLY-------NLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIPK 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EA+ ALGL+  +A RLV+LPQ++R  +PPL SQ LNL KNSS+A+ +G A+L+    
Sbjct: 129 EQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            + + T +  E        YLS+S+ I +F
Sbjct: 189 QVESATFRGFEAFAFATAAYLSISMAITVF 218


>gi|317153799|ref|YP_004121847.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316944050|gb|ADU63101.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 255

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 87/133 (65%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EFM+  IAL+ YT+AFIAE +R+G+ ++P+ Q+EA+ A+GL+  +A R V+LPQA+R +I
Sbjct: 122 EFMTGVIALTVYTSAFIAEEIRAGIFSIPKTQIEASRAVGLSFTQAYRYVILPQALRIVI 181

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL SQ LNL+KNSSL + +G  +L+ +   + +  G   E     + IYL +S+ ++  
Sbjct: 182 PPLISQSLNLIKNSSLCMVIGVTELMFMARQVESYHGAPFEAFSAALLIYLVISLFVSFG 241

Query: 385 MNRLNAKIALKEK 397
           +   N    ++ +
Sbjct: 242 ITMYNKHFLIQVR 254



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A  +  G V T  +A   ++ A ++G ++   R++  KL+ W    Y E FRN P LV I
Sbjct: 16  AQWMWEGLVTTMQIATISLLCAMLLGIVICVFRMTPFKLLQWFSLAYTEFFRNTPLLVQI 75

Query: 146 FFLYKSVLSVLP 157
           FF Y +   VLP
Sbjct: 76  FFWYNASHFVLP 87


>gi|207723709|ref|YP_002254107.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206588913|emb|CAQ35875.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 231

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 21/210 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           L++  +   FV +  LGIV++L         R     + +  + +PLL    F  FG P 
Sbjct: 24  LSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQTYVEAIRNVPLLAHMLFWYFGAPQ 83

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+  A++  L+         N+   S V        IAL  YTAA++AE +RSGL ++P+
Sbjct: 84  LLPNAVRTWLY-------DLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIPK 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+EA+ ALGL+  +A R V+LPQ++R  +PPL SQ LNL KNSS+A+ +G A+L+    
Sbjct: 129 EQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            + + T +  E        YL++SI I +F
Sbjct: 189 QVESATFRGFEAFAFATAAYLTISIAITVF 218


>gi|83746552|ref|ZP_00943603.1| GlnP [Ralstonia solanacearum UW551]
 gi|207743862|ref|YP_002260254.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726883|gb|EAP74010.1| GlnP [Ralstonia solanacearum UW551]
 gi|206595262|emb|CAQ62189.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 231

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 23/211 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-------LPLLYISTFLIFGLP 233
           L++  +   FV +  LGIV++L     S       G+A       +PLL    F  FG P
Sbjct: 24  LSIKLSVLAFVLALPLGIVVALLRMAPSAPL-RAIGQAFVEAIRNVPLLAHMLFWYFGAP 82

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+  A++  L+         N+   S V        IAL  YTAA++AE +RSGL ++P
Sbjct: 83  QLLPNAVRTWLY-------DLNYEAASAV--------IALVLYTAAYMAEDIRSGLRSIP 127

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           + Q+EA+ ALGL+  +A R V+LPQ++R  +PPL SQ LNL KNSS+A+ +G A+L+   
Sbjct: 128 KEQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYEA 187

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
             + + T +  E        YL++SI I +F
Sbjct: 188 QQVESATFRGFEAFAFATAAYLTISIAITVF 218


>gi|116512613|ref|YP_811520.1| amino acid ABC transporter permease/periplasmic protein
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116108267|gb|ABJ73407.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactococcus lactis subsp. cremoris SK11]
          Length = 714

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 35/222 (15%)

Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215
           FG+  NN     RGL    +T++     F+ + ++GI+  LF+   S+        +   
Sbjct: 497 FGILQNNWEQIGRGL---LVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 553

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273
            +++PLL ++ F+ +G+P L+ I   +Q                   SP  EF +  IAL
Sbjct: 554 NRSIPLLVLTIFIFYGIPNLLQIITGHQ-------------------SPLNEFTAGVIAL 594

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP L +Q++ 
Sbjct: 595 TLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLINQFII 654

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            LK+++L   +G  +L+  G  I+ +  QA  +  +   +Y+
Sbjct: 655 TLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYM 696


>gi|125624721|ref|YP_001033204.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|62421458|gb|AAX82492.1| GlnP [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493529|emb|CAL98510.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071518|gb|ADJ60918.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 714

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 35/222 (15%)

Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215
           FG+  NN     RGL    +T++     F+ + ++GI+  LF+   S+        +   
Sbjct: 497 FGILQNNWEQIGRGL---LVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 553

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273
            +++PLL ++ F+ +G+P L+ I   +Q                   SP  EF +  IAL
Sbjct: 554 NRSIPLLVLTIFIFYGIPNLLQIITGHQ-------------------SPLNEFTAGVIAL 594

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP L +Q++ 
Sbjct: 595 TLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLINQFII 654

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            LK+++L   +G  +L+  G  I+ +  QA  +  +   +Y+
Sbjct: 655 TLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYM 696


>gi|90413902|ref|ZP_01221888.1| hypothetical amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90325086|gb|EAS41596.1| hypothetical amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 315

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 15/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S    +++ L A  L R  +    K L  LY+   +I G P LV I + Y     
Sbjct: 122 KISVISLFFAVIIGLVAG-LMRISNNPVTKNLSFLYVE--IIRGTPLLVQIFIVY----- 173

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   F+G       F +  +ALS +T A+IAEI+RSG+ ++P GQMEAA +LG+ +
Sbjct: 174 -------FFLGTIFDLERFTAGVVALSVFTGAYIAEIIRSGIQSIPPGQMEAARSLGMNY 226

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            KA   V+LPQA +  +PP+  Q + L+K+SSL   +   DL   G  +I+ +    E+ 
Sbjct: 227 PKAMAYVILPQAFKRTLPPMAGQLITLIKDSSLVSVISITDLTKAGREVISGSFATFEVW 286

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +YL L+I ++  + R+  ++A  +
Sbjct: 287 FVVAGLYLLLTISLSWVVQRIEKRLASSD 315


>gi|193084291|gb|ACF09950.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote KM3-130-D10]
          Length = 709

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 99/148 (66%), Gaps = 4/148 (2%)

Query: 247 DKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           D P  G ++   G+   ++P F+++ + L+ +TA+ +AEIVR  + A+P+GQ+EAAI+L 
Sbjct: 559 DSP--GSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPKGQVEAAISLA 616

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  RLV+LPQA+RS++P + +Q++N+ KNSSLAV V ++D+  V   ++N  G+ I
Sbjct: 617 LNPFQRLRLVILPQALRSMVPLMNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLI 676

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + ++ +  Y + S+ I+L MN  N ++
Sbjct: 677 PLFILLLITYQAGSLAISLVMNWYNTRV 704



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI-PDHSIVLPF 167
           I+GT+VG  RLS+NKL + +  VYVE+FRN+P  V++F +        P+  D + +   
Sbjct: 328 ILGTIVGVTRLSSNKLASTMATVYVEIFRNLPLAVLLFLIATQYGIQAPLFIDETFLFGG 387

Query: 168 GMFLNNRGLSFPTL 181
            +F +N+G+ F T+
Sbjct: 388 AVFYSNQGIWFVTV 401


>gi|65318067|ref|ZP_00391026.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
          Length = 218

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 121/207 (58%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LG+VL++      R  +          ++ T  +  +  + L+ + +  +F  PV+G
Sbjct: 32  SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81

Query: 253 --QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+ G+          + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A
Sbjct: 82  ITXNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|163858765|ref|YP_001633063.1| amino acids ABC transporter, permease protein [Bordetella petrii
           DSM 12804]
 gi|163262493|emb|CAP44796.1| amino acids ABC transporter, permease protein [Bordetella petrii]
          Length = 234

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/143 (43%), Positives = 92/143 (64%), Gaps = 5/143 (3%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N IGG     EF    IA+   TAA+++E +RS + A+PRGQMEAA +LGL++ +A R V
Sbjct: 95  NIIGG-----EFFYATIAIGLVTAAYVSEDLRSAIRAIPRGQMEAARSLGLSYLQAMRKV 149

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA +  IPPLT+Q L L KN+SLA+A+G  +L   G TI + T +  E  L+   +Y
Sbjct: 150 ILPQAFKISIPPLTNQTLLLFKNTSLAMAIGLIELTGAGRTIESATFKTFEAYLVVTVLY 209

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L++S+++ L    L+ ++A   K
Sbjct: 210 LAISLLLMLAGALLSKRVAYVTK 232


>gi|218895695|ref|YP_002444106.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228899326|ref|ZP_04063589.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 4222]
 gi|228963738|ref|ZP_04124880.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218544782|gb|ACK97176.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228795974|gb|EEM43440.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228860357|gb|EEN04754.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 4222]
          Length = 218

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 EKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|323697541|ref|ZP_08109453.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457473|gb|EGB13338.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 246

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 85/131 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF+   IAL+ YT+AFIAE +R+G+ ++P+ Q+EA+ A+GL+  +  R V+LPQA+R +I
Sbjct: 113 EFIMSIIALTVYTSAFIAEEIRAGIFSIPKNQLEASRAVGLSFLQGYRYVILPQALRIVI 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL SQ LNL+KNSSL + +G  DL+     I +      E   + + IYL++S++++  
Sbjct: 173 PPLISQALNLIKNSSLVMVLGVTDLMYQATQIESYHAMPFEAFTVALLIYLAISLVVSFC 232

Query: 385 MNRLNAKIALK 395
           +   N    ++
Sbjct: 233 ITMYNKHFMIQ 243



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 33/66 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T  ++   ++ A I+G ++   R++  K   W    Y E FRN P L+ IFF Y  
Sbjct: 13  GFCTTMQISTISLVSAMILGIIICILRMTPFKPFQWFSLAYTEFFRNTPLLIQIFFWYNG 72

Query: 152 VLSVLP 157
              ++P
Sbjct: 73  AHVIIP 78


>gi|30260795|ref|NP_843172.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47777838|ref|YP_017269.2| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183633|ref|YP_026885.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|52144670|ref|YP_082158.1| glutamine ABC transporter permease [Bacillus cereus E33L]
 gi|165872951|ref|ZP_02217574.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167635148|ref|ZP_02393464.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|167640890|ref|ZP_02399148.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|170689011|ref|ZP_02880211.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|170708477|ref|ZP_02898919.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|177652812|ref|ZP_02935185.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190568537|ref|ZP_03021443.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196041831|ref|ZP_03109120.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|227816489|ref|YP_002816498.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228913330|ref|ZP_04076963.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228925829|ref|ZP_04088913.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229120291|ref|ZP_04249541.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 95/8201]
 gi|229601249|ref|YP_002865239.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|254684282|ref|ZP_05148142.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CNEVA-9066]
 gi|254722086|ref|ZP_05183875.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A1055]
 gi|254738746|ref|ZP_05196449.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Western North America USA6153]
 gi|254742042|ref|ZP_05199729.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Kruger B]
 gi|254754972|ref|ZP_05207006.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Vollum]
 gi|254762297|ref|ZP_05214141.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Australia 94]
 gi|30254244|gb|AAP24658.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47551543|gb|AAT29744.2| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177560|gb|AAT52936.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|51978139|gb|AAU19689.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus E33L]
 gi|164711305|gb|EDR16859.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167511110|gb|EDR86498.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|167529407|gb|EDR92158.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|170126598|gb|EDS95483.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|170666996|gb|EDT17759.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|172081846|gb|EDT66915.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190560331|gb|EDV14310.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196027325|gb|EDX65943.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|227003240|gb|ACP12983.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228663101|gb|EEL18691.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 95/8201]
 gi|228833844|gb|EEM79397.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228846239|gb|EEM91258.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229265657|gb|ACQ47294.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
          Length = 218

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LG+VL++      R  +          ++ T  +  +  + L+ + +  +F  PV+G
Sbjct: 32  SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81

Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              N F+ G+          + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A
Sbjct: 82  ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|281492351|ref|YP_003354331.1| glutamine ABC transporter permease/substrate-binding protein
           [Lactococcus lactis subsp. lactis KF147]
 gi|281376015|gb|ADA65506.1| Glutamine ABC transporter, permease and substrate-binding protein
           [Lactococcus lactis subsp. lactis KF147]
          Length = 714

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 35/222 (15%)

Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215
           FG+  NN     RGL    +T++     F+ + ++GI+  LF+   S+        +   
Sbjct: 497 FGILQNNWEQIGRGL---LVTLELAILSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 553

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273
            +++PLL ++ F+ +G+P L+ I   +Q                   SP  EF +  IAL
Sbjct: 554 NRSIPLLVLTIFIFYGIPNLLQIITGHQ-------------------SPLNEFTAGVIAL 594

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP L +Q++ 
Sbjct: 595 TLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLINQFII 654

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            LK+++L   +G  +L+  G  I+ +  QA  +  +   +Y+
Sbjct: 655 TLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYM 696


>gi|196047168|ref|ZP_03114385.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218901837|ref|YP_002449671.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|229182975|ref|ZP_04310207.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BGSC 6E1]
 gi|196022038|gb|EDX60728.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218535045|gb|ACK87443.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|228600432|gb|EEK58020.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BGSC 6E1]
          Length = 218

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LG+VL++      R  +          ++ T  +  +  + L+ + +  +F  PV+G
Sbjct: 32  SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81

Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              N F+ G+          + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A
Sbjct: 82  ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|229095293|ref|ZP_04226285.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-29]
 gi|229114242|ref|ZP_04243663.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-3]
 gi|228669262|gb|EEL24683.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-3]
 gi|228688152|gb|EEL42038.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-29]
          Length = 218

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G     F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGVTLNGFVAGT----------LTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYTRAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|118476327|ref|YP_893478.1| glutamine ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|118415552|gb|ABK83971.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Bacillus thuringiensis str. Al Hakam]
          Length = 218

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 122/207 (58%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LG+VL++      R  +          ++ T  +  +  + L+ + +  +F  PV+G
Sbjct: 32  SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81

Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              N F+ G+          + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A
Sbjct: 82  ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|225862619|ref|YP_002747997.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|225789271|gb|ACO29488.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
          Length = 218

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|15673741|ref|NP_267915.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|12724781|gb|AAK05857.1|AE006406_1 glutamine ABC transporter permease and substrate binding protein
           protein [Lactococcus lactis subsp. lactis Il1403]
 gi|326407245|gb|ADZ64316.1| glutamine ABC transporter permease/substrate-binding protein
           [Lactococcus lactis subsp. lactis CV56]
          Length = 714

 Score =  103 bits (256), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 121/222 (54%), Gaps = 35/222 (15%)

Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215
           FG+  NN     RGL    +T++     F+ + ++GI+  LF+   S+        +   
Sbjct: 497 FGILQNNWEQIGRGL---LVTLELAILSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 553

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273
            +++PLL ++ F+ +G+P L+ I   +Q                   SP  EF +  IAL
Sbjct: 554 NRSIPLLVLTIFIFYGIPNLLQIITGHQ-------------------SPLNEFTAGVIAL 594

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP L +Q++ 
Sbjct: 595 TLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLINQFII 654

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            LK+++L   +G  +L+  G  I+ +  QA  +  +   +Y+
Sbjct: 655 TLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYM 696


>gi|239826928|ref|YP_002949552.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. WCH70]
 gi|239807221|gb|ACS24286.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. WCH70]
          Length = 217

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 84/123 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YTAAFIAE++RSG++AVP+GQMEAA + GLT+ +  R ++LPQA++ +IPPL +Q
Sbjct: 92  LGLMVYTAAFIAEVIRSGILAVPKGQMEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+KNSS+   +   DL+  G  I ++T    ++ +     YL L+I ++L +  L  
Sbjct: 152 FINLVKNSSVLGVIAGLDLMYFGDLISSETFVTFDVYIFVALFYLVLTIPLSLGVGYLEQ 211

Query: 391 KIA 393
           ++A
Sbjct: 212 RLA 214


>gi|193083903|gb|ACF09582.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote KM3-72-G3]
          Length = 714

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 97/148 (65%), Gaps = 4/148 (2%)

Query: 247 DKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           D P  G +    GS   ++P F+++ + L+ +TA+ IAEIVR  + ++PRGQ+EAAI+L 
Sbjct: 564 DSP--GSWTIAEGSGFEITPFFLAMMLGLTLFTASTIAEIVRGSIQSLPRGQVEAAISLS 621

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  RLV+LPQA+RS++P   +Q++N+ KNSSLAV V ++D+  V   ++N  G+ I
Sbjct: 622 LNPYQRLRLVILPQALRSMVPLFNNQFMNVWKNSSLAVIVAYSDIFYVILVMMNNVGKLI 681

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + ++ +  Y + S+ I++ MN  N ++
Sbjct: 682 PLFILLLITYQAGSLAISIVMNWYNTRV 709



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI-PDHSIVLPF 167
           I+GT+VG  RLS+N L + +  VYVE+FRN+P  V++F +        P+  + +  L  
Sbjct: 333 ILGTIVGVTRLSSNWLASSMATVYVEIFRNLPLAVLLFLIATQFGQSAPLFKEETFFLGD 392

Query: 168 GMFLNNRGLSFPTL 181
            +F +N+G+ F T+
Sbjct: 393 AVFYSNQGIWFVTV 406


>gi|229089703|ref|ZP_04220964.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-42]
 gi|228693602|gb|EEL47304.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-42]
          Length = 218

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 122/207 (58%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LG+VL++      R  +          ++ T  +  +  + L+ + +  +F  PV+G
Sbjct: 32  SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81

Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              N F+ G+          + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+++A
Sbjct: 82  ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYKQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGVDLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|324324680|gb|ADY19940.1| amino acid ABC transporter, permease protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 218

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVVGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|75765095|ref|ZP_00744384.1| Glutamine transport system permease protein glnM [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74487419|gb|EAO51346.1| Glutamine transport system permease protein glnM [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 190

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 38  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 85

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 86  EKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 145

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 146 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 188


>gi|330429006|gb|AEC20340.1| glutamate/aspartate transport system permease protein [Pusillimonas
           sp. T7-7]
          Length = 142

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 81/125 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+++ IALS YTAA  AE++RSG+ AV  GQ +AA ALGLT   + R V+LPQA R I+
Sbjct: 7   QFLTVLIALSLYTAAKAAEVIRSGIQAVSIGQKQAASALGLTEPGSYRHVILPQAFRIIM 66

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTS +LN+ KNSS+A+ +GF +L      I + + Q  E  +    IY  +++ +  F
Sbjct: 67  PPLTSDFLNVFKNSSVALTIGFMELTGQTRQIGDFSSQPFEAYIAATVIYTLVTLSVIWF 126

Query: 385 MNRLN 389
           M R+ 
Sbjct: 127 MRRIE 131


>gi|90577484|ref|ZP_01233295.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90440570|gb|EAS65750.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 272

 Score =  102 bits (255), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 19/213 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+  +A   +F+ + G+V +L   RLS   H   G+AL   YI   +I   P LV I L
Sbjct: 75  ITIKISAISLIFTIIFGLVTALL--RLS---HSIVGRALARGYIE--VIRNTPLLVQIYL 127

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +    PVLG             F +  +ALS +  A+ AEI RSGL+ +P+GQ EAA
Sbjct: 128 LYFVF--GPVLGL----------ERFTTAVLALSLFQGAYTAEIFRSGLMNIPKGQFEAA 175

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+   + R ++LPQ +R I+P LT++ ++L+KNSS+   +   DL + G  I+  T
Sbjct: 176 ESLGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVADT 235

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               EI      +YL ++++++ F   L  K+A
Sbjct: 236 AMPFEIWFTIAAMYLCITLLLSAFATLLEHKLA 268


>gi|229194959|ref|ZP_04321740.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1293]
 gi|228588527|gb|EEK46564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1293]
          Length = 218

 Score =  102 bits (255), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVVGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|34495574|ref|NP_899789.1| glutamate/aspartate transport system permease [Chromobacterium
           violaceum ATCC 12472]
 gi|34101429|gb|AAQ57798.1| glutamate/aspartate transport system permease [Chromobacterium
           violaceum ATCC 12472]
          Length = 246

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 86/133 (64%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S  + +F+S+ + L  +TAA +AE VR+G+ A+PRGQ  AA+A+G +  +  R VLLPQA
Sbjct: 105 SPTTSQFLSVVVCLGLFTAARVAEQVRTGIEALPRGQRNAAMAVGFSLGQTYRHVLLPQA 164

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           MR IIPPLTS++LN++KNSS+A  +G A+L++        +    E   +   IY +L++
Sbjct: 165 MRIIIPPLTSEFLNIIKNSSVASLIGLAELLAQTKQTAEFSANLFEAFTLATVIYFTLNM 224

Query: 380 MIALFMNRLNAKI 392
            + L M+ L  K+
Sbjct: 225 SLMLGMSALEKKL 237



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 40/66 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  +A SG I A ++GT+VG  R   N+ +A +  VYVE+FRN+P LV +F  Y  
Sbjct: 28  GLGWTLAVALSGWIIALLLGTVVGVARTLPNRGIAGLATVYVELFRNVPLLVQLFVWYFL 87

Query: 152 VLSVLP 157
           V  +LP
Sbjct: 88  VPDLLP 93


>gi|154505132|ref|ZP_02041870.1| hypothetical protein RUMGNA_02645 [Ruminococcus gnavus ATCC 29149]
 gi|153794611|gb|EDN77031.1| hypothetical protein RUMGNA_02645 [Ruminococcus gnavus ATCC 29149]
          Length = 228

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 120/212 (56%), Gaps = 20/212 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +F+ ++G+++  F   + R  H+KTGK     A+  +Y++  +I G P+++ +   Y + 
Sbjct: 32  LFALLVGVIIG-FTVAIIRSLHDKTGKFKILNAICKVYLT--IIRGTPSMIQVLFMYLVV 88

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F    L     IGG           +A    + A++AEIVRSG++A+P GQ EA  +LGL
Sbjct: 89  FGASSLNSI-VIGG-----------LAFGINSGAYVAEIVRSGIMAIPEGQTEAGRSLGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           ++ +  RL+++PQA ++++P L ++ + L+K +++   +G  DL      I ++T +A  
Sbjct: 137 SYGQTMRLIIMPQAFKNVLPALVNEMIVLIKETAIIGYIGEQDLTKAAMVIQSRTFEAFI 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++    IYL+L +++  FMN+L  ++   E+
Sbjct: 197 PLITAAVIYLALVMLLTFFMNKLERRLRTNER 228


>gi|269104573|ref|ZP_06157269.1| amino acid ABC transporter permease protein [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268161213|gb|EEZ39710.1| amino acid ABC transporter permease protein [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 280

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 124/241 (51%), Gaps = 25/241 (10%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           IP +  V   G +     +    +T+  +A   +F+  LG++ +L   RLS       G+
Sbjct: 59  IPQYLFVHEDGEWYRGELIDGLLITLKISAVSLIFTLGLGLITALL--RLSDSI---VGR 113

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCY 276
           AL   YI   LI   P LV I + Y             F+ G  +  E F +  +ALS +
Sbjct: 114 ALARGYIE--LIRNTPLLVQIYILY-------------FVLGPILDLERFTTAVLALSLF 158

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ AEI R+GL A+P+GQ EAA +LGL+  +  R V+LPQ ++ I+PPLT++ ++L+K
Sbjct: 159 QGAYTAEIFRAGLNAIPKGQFEAAASLGLSQWQMYRFVILPQVIKRILPPLTNETVSLVK 218

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI----ALFMNRLNAKI 392
           NSS+   +   DL + G  I+  T    E+      IYL +++++    A   +RLN  I
Sbjct: 219 NSSIVSIMAIFDLTTEGRNIVADTAMPFEVWFTVAAIYLCVTLLLSAVAAWMAHRLNTAI 278

Query: 393 A 393
           A
Sbjct: 279 A 279


>gi|218296356|ref|ZP_03497099.1| polar amino acid ABC transporter, inner membrane subunit [Thermus
           aquaticus Y51MC23]
 gi|218243150|gb|EED09681.1| polar amino acid ABC transporter, inner membrane subunit [Thermus
           aquaticus Y51MC23]
          Length = 263

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 16/210 (7%)

Query: 188 KIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKY 242
           K+ + S + G+V+ + A   RLS     +    LP    +TF I+   G P LV I   Y
Sbjct: 60  KLTLISGLAGLVIGVLAGMARLSSRAWVR----LP----ATFYIWVTRGTPLLVQILFAY 111

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P L Q  + G       + + +IALS    A+ AE+VR+G+ A+P+GQ EAA +
Sbjct: 112 N---ALPFLLQPLWPGAQQALTPYWAAFIALSFNVGAYNAEVVRAGIQAIPKGQWEAAWS 168

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+     R V+LPQA+R ++PPL +  + LLK+SSLA  +  A+L   G  II+ T +
Sbjct: 169 LGLSPVDTMRFVVLPQALRIVVPPLVNNLVALLKDSSLASVITLAELALSGQRIISATFR 228

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +E+ L    IYL L+ ++  F NRL  ++
Sbjct: 229 PVEVYLAVAAIYLLLTTVLTQFTNRLEERL 258


>gi|157693148|ref|YP_001487610.1| glutamine ABC transporter membrane protein [Bacillus pumilus
           SAFR-032]
 gi|157681906|gb|ABV63050.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 217

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 105/175 (60%), Gaps = 10/175 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL ++ T  +  +  + L+ + +   F  PVLG         V+  F +  IAL+ YT+A
Sbjct: 49  PLNWLGTAYVEFIRNIPLLLITFVFFFGLPVLG--------IVADGFTAGTIALAIYTSA 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAE VR+G+ AVP GQMEAA A GL++    R ++LPQA++ +IPPL +Q++NL+KNSS
Sbjct: 101 FIAEAVRAGIQAVPLGQMEAARASGLSYGGTMRYIILPQAIKIVIPPLGNQFINLVKNSS 160

Query: 340 -LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            L V  GF DL+  G  I ++T    ++ +     YL L+I ++L +  L  ++A
Sbjct: 161 ILGVIAGF-DLMYQGDLIASRTFVTFDVYIFVAMFYLILTIPLSLGVGYLEKRLA 214


>gi|54308669|ref|YP_129689.1| amino acid ABC transporter permease [Photobacterium profundum SS9]
 gi|46913098|emb|CAG19887.1| hypothetical amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 315

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 15/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI + S    +++ L A  L R  +    K L  LY+   +I G P L+ I + Y     
Sbjct: 122 KISIISLFFAVIIGLVAG-LMRISNNPVTKNLSFLYVE--IIRGTPLLIQIFIVY----- 173

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   F+G       F +  +ALS +T A+IAEI+RSG+ ++P GQMEAA +LG+ +
Sbjct: 174 -------FFLGTIFDLERFTAGVVALSVFTGAYIAEIIRSGIQSIPPGQMEAARSLGMNY 226

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            KA   V+LPQA +  +PP+  Q + L+K+SSL   +   DL   G  +I+ +    E+ 
Sbjct: 227 PKAMAYVILPQAFKRTLPPMAGQLITLIKDSSLVSVISITDLTKAGREVISGSFATFEVW 286

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +YL L+I ++  + R+  ++A  +
Sbjct: 287 FVVAGLYLLLTISLSWVVQRIEKRLASSD 315


>gi|227877817|ref|ZP_03995841.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844626|ref|ZP_05550111.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256850695|ref|ZP_05556119.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|293381614|ref|ZP_06627598.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295692448|ref|YP_003601058.1| glutamine ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|227862578|gb|EEJ70073.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613167|gb|EEU18371.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256712466|gb|EEU27463.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|290921798|gb|EFD98816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295030554|emb|CBL50033.1| Glutamine ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
          Length = 213

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 20/203 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS +LG++ +L     S     K G+ +  +YI+ F    +P LV++ + Y L   + +
Sbjct: 28  VFSLILGVIFALLEVAPS-----KFGQVIAKIYIAIFR--NIPLLVIVMIFY-LIVPRYI 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VR+G+ ++  GQME A + G+T+ +A
Sbjct: 80  VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYVQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQAM+ +IPPL +Q++NL+KNSS LA   GF DL+     I   T Q I+  +I
Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFQTIDTYII 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
               YL L++ ++ +M  L  K+
Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKL 211


>gi|224372631|ref|YP_002607003.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Nautilia profundicola AmH]
 gi|223588694|gb|ACM92430.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Nautilia profundicola AmH]
          Length = 237

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 81/128 (63%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +AL  YT A+I E+V++G+ ++P+GQ EAA +LG+   +    ++ PQA+R IIP
Sbjct: 104 FFSALLALILYTGAYIGEVVKAGINSIPKGQFEAAQSLGMNRFQVMWYIIYPQAIRIIIP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTSQ+LNL+KNSSLA+ +G A+L      I  +T +  E       +Y+ L++  + FM
Sbjct: 164 PLTSQFLNLIKNSSLAMTIGVAELTFATQQIDAETFRGFEAATAVTILYIFLTLTTSFFM 223

Query: 386 NRLNAKIA 393
           N +  K +
Sbjct: 224 NLIEIKFS 231



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 5/81 (6%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           G+E D G++       Y   ++ G + T  L+  G++ + +IG++VG GR S N  ++  
Sbjct: 2   GYEFDWGVLI-----EYKGLLIQGLITTVKLSILGILFSFLIGSIVGIGRASKNFWLSLF 56

Query: 129 CRVYVEVFRNIPPLVVIFFLY 149
              YVE FRNIP +V +FF+Y
Sbjct: 57  ASYYVESFRNIPLIVQMFFIY 77


>gi|262047082|ref|ZP_06020041.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|312984302|ref|ZP_07791646.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus CTV-05]
 gi|260572659|gb|EEX29220.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|310894320|gb|EFQ43398.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus CTV-05]
          Length = 213

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 20/203 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS +LG++ +L     S     K G+ +  +YI+ F    +P LV++ + Y L   + +
Sbjct: 28  VFSLILGVIFALLEVAPS-----KFGQVIAKIYIAIFR--NIPLLVIVMIFY-LIVPRYI 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VR+G+ ++  GQME A + G+T+ +A
Sbjct: 80  VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYVQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQAM+ +IPPL +Q++NL+KNSS LA   GF DL+     I   T Q I+  +I
Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFQTIDTYII 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
               YL L++ ++ +M  L  K+
Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKL 211


>gi|251791765|ref|YP_003006486.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540386|gb|ACT09007.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 247

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 14/188 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGL 232
           +T+   A   V + +LG++L+  A R SR +        +    +  PLL    F  FG+
Sbjct: 29  VTLGLAAVTVVLATLLGLILA--AGRDSRTWLLRWLVIAYCSLFRNTPLLVQLFFWYFGV 86

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L+   L   L  + P +     +G +  S EF++    L+ Y+AAFIAE +R+G+  V
Sbjct: 87  AQLLPAGLMQWL--NSPHI--IPLVGLNIPSFEFLAGLFGLTLYSAAFIAEEIRAGIAGV 142

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ  AA ALGLTH +A R V+LPQA+R  +PPL  QY+N++KNSSLA+A+G A+L   
Sbjct: 143 ARGQQYAACALGLTHWQAMRYVVLPQALRIALPPLLGQYMNIIKNSSLAMAIGVAELSYA 202

Query: 353 GGTIINQT 360
              +  +T
Sbjct: 203 SRQVETET 210



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 73  DQGIVPYTSD----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           D+ I  + +D      Y   +  GF  T  LA   ++ AT++G ++ AGR S   L+ W+
Sbjct: 3   DESIRHWLTDWLLAPQYLQWLWQGFQVTLGLAAVTVVLATLLGLILAAGRDSRTWLLRWL 62

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
              Y  +FRN P LV +FF Y  V  +LP
Sbjct: 63  VIAYCSLFRNTPLLVQLFFWYFGVAQLLP 91


>gi|228957062|ref|ZP_04118836.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802622|gb|EEM49465.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 218

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N FI G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFIAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|229159721|ref|ZP_04287730.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus R309803]
 gi|228623746|gb|EEK80563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus R309803]
          Length = 218

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|94985165|ref|YP_604529.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM
           11300]
 gi|94555446|gb|ABF45360.1| amino acid ABC transporter membrane protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 263

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 87/133 (65%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF S  IAL+    A+ AE++R+G++AVPRGQ+EAA +LGL+  +  R V+LPQA+R ++
Sbjct: 131 EFWSAVIALALNVGAYNAEVIRAGILAVPRGQVEAARSLGLSGVQTMRTVVLPQALRIVV 190

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +  + LLK+SSLA  +   +L   G  + ++T Q + ++     +YL+L+ ++ LF
Sbjct: 191 PPLVNNLVALLKDSSLASTISLLELTLAGSRVSSETFQPVPVLTTIAAVYLALTTVMTLF 250

Query: 385 MNRLNAKIALKEK 397
            ++L  ++ +  +
Sbjct: 251 TDQLEKRVKIATR 263


>gi|69246348|ref|ZP_00603904.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|257878164|ref|ZP_05657817.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257881052|ref|ZP_05660705.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884713|ref|ZP_05664366.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257889637|ref|ZP_05669290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257892423|ref|ZP_05672076.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257898671|ref|ZP_05678324.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|258616330|ref|ZP_05714100.1| glutamine transport system permease protein [Enterococcus faecium
           DO]
 gi|260559211|ref|ZP_05831397.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207744|ref|ZP_05922429.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289565819|ref|ZP_06446261.1| glutamine ABC transporter permease glnM [Enterococcus faecium
           D344SRF]
 gi|293554037|ref|ZP_06674637.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1039]
 gi|293563129|ref|ZP_06677594.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1162]
 gi|293569786|ref|ZP_06680873.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1071]
 gi|293572582|ref|ZP_06683556.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E980]
 gi|294614007|ref|ZP_06693937.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1636]
 gi|294623309|ref|ZP_06702171.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium U0317]
 gi|314939890|ref|ZP_07847096.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943737|ref|ZP_07850476.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314949693|ref|ZP_07853011.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314953239|ref|ZP_07856178.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314993681|ref|ZP_07859029.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314997402|ref|ZP_07862353.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|68195301|gb|EAN09752.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|257812392|gb|EEV41150.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257816710|gb|EEV44038.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257820551|gb|EEV47699.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257825997|gb|EEV52623.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257828802|gb|EEV55409.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257836583|gb|EEV61657.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|260074968|gb|EEW63284.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078127|gb|EEW65833.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289162362|gb|EFD10220.1| glutamine ABC transporter permease glnM [Enterococcus faecium
           D344SRF]
 gi|291587534|gb|EFF19411.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1071]
 gi|291593114|gb|EFF24693.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1636]
 gi|291597277|gb|EFF28466.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium U0317]
 gi|291601819|gb|EFF32071.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1039]
 gi|291604907|gb|EFF34376.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1162]
 gi|291607365|gb|EFF36713.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E980]
 gi|313588537|gb|EFR67382.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313591855|gb|EFR70700.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313594705|gb|EFR73550.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597600|gb|EFR76445.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640853|gb|EFS05433.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313643951|gb|EFS08531.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 215

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 18/216 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+ ++    VFS ++G ++++F  +LS++   K   AL   Y+  F    +P L+++  
Sbjct: 18  ITLFSSVLALVFSLIIGTLMAIF--QLSKN---KVVSALAKAYVEFFR--NIPLLIIVMF 70

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +    P+   FN  G       F +  I L+ YT+AFIAE VRSG+  VP+GQ EA 
Sbjct: 71  FYVV---VPIY-WFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAG 119

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++ G T+ +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+  G  I ++T
Sbjct: 120 LSSGFTYSEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASET 179

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +  +I    YL +++ ++  M  L  K A++ 
Sbjct: 180 FNTFDTYIIVGLFYLVITLPLSYLMVYLEKKWAVRS 215



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    + GF  T + +   ++ + IIGTL+   +LS NK+V+ + + YVE FRNIP L
Sbjct: 6   QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSALAKAYVEFFRNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|300690824|ref|YP_003751819.1| amino acid transmembrane abc transporter protein [Ralstonia
           solanacearum PSI07]
 gi|299077884|emb|CBJ50523.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum PSI07]
          Length = 231

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 15/168 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL    F  FG P L+ +++K  L+         N+   S V        IAL  Y
Sbjct: 66  RNVPLLAHMLFWYFGAPQLLPMSVKTWLY-------NLNYEAASAV--------IALVLY 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA++AE +RSG+ ++P+ Q+EA+ ALGL   +A RLV+LPQ++R  +PP+ SQ LNL K
Sbjct: 111 TAAYMAEDIRSGIRSIPKEQLEASRALGLGFLQAMRLVVLPQSLRVTVPPMVSQTLNLWK 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           NSS+A+ +G A+L+     + + T +  E        YLS+S+ I +F
Sbjct: 171 NSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVF 218


>gi|228937879|ref|ZP_04100507.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228970760|ref|ZP_04131400.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228788885|gb|EEM36824.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821785|gb|EEM67785.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326938357|gb|AEA14253.1| glutamine transport system permease protein glnP [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 218

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|229177166|ref|ZP_04304555.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 172560W]
 gi|228606347|gb|EEK63779.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 172560W]
          Length = 218

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|301052295|ref|YP_003790506.1| ABC transporter permease [Bacillus anthracis CI]
 gi|300374464|gb|ADK03368.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus biovar anthracis str. CI]
          Length = 218

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 121/207 (58%), Gaps = 25/207 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LG+VL++      R  +          ++ T  +  +  + L+ + +  +F  PV+G
Sbjct: 32  SFILGVVLAIMRIAPIRILN----------WLGTAFVEFVRNIPLVLIAFIFYFALPVVG 81

Query: 253 -QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              N F+ G+          + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +A
Sbjct: 82  ITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYTQA 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILI 369
              V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G  I  +T    ++ I +
Sbjct: 132 MYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTKTFVTFDVYIFV 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            MF YL L+I +++ +  L  ++A KE
Sbjct: 192 GMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|228995973|ref|ZP_04155629.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock3-17]
 gi|229003590|ref|ZP_04161406.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock1-4]
 gi|228757632|gb|EEM06861.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock1-4]
 gi|228763746|gb|EEM12637.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock3-17]
          Length = 233

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 14/161 (8%)

Query: 235 LVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G     FI G+           AL+ YTAAFIAE +R+G+++V
Sbjct: 81  LVLIA--FVFYFAFPVMGVTLNGFIAGTA----------ALTIYTAAFIAEAIRAGILSV 128

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQMEAA + GLT+ +A   ++LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 129 PKGQMEAARSSGLTYVQAMYYIVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 188

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  I  +T    ++ +     YL L++ +++ +     ++A
Sbjct: 189 GDLISTRTFVTFDVYIFVGMFYLLLTVPLSMLVRYFEKRLA 229



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T   +   +I + I+GT++   R++  +++ W    YVE  RNIP +++ F  Y
Sbjct: 30  LEGFKYTVMSSIVALIGSFILGTIMAVMRIAPIRVLNWFGAAYVEFIRNIPLVLIAFVFY 89


>gi|206968581|ref|ZP_03229537.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|228919495|ref|ZP_04082859.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228951132|ref|ZP_04113248.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229068326|ref|ZP_04201629.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus F65185]
 gi|229077954|ref|ZP_04210563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-2]
 gi|229108250|ref|ZP_04237872.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-15]
 gi|229143368|ref|ZP_04271799.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST24]
 gi|206737501|gb|EDZ54648.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|228640175|gb|EEK96574.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST24]
 gi|228675266|gb|EEL30488.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-15]
 gi|228705292|gb|EEL57669.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-2]
 gi|228714787|gb|EEL66659.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus F65185]
 gi|228808542|gb|EEM55045.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228840138|gb|EEM85415.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 218

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|228989783|ref|ZP_04149763.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           pseudomycoides DSM 12442]
 gi|228769930|gb|EEM18513.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           pseudomycoides DSM 12442]
          Length = 233

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 16/162 (9%)

Query: 235 LVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G     FI G+           AL+ YTAAFIAE +R+G+++V
Sbjct: 81  LVLIA--FVFYFAFPVMGVTLNGFIAGTA----------ALTIYTAAFIAEAIRAGILSV 128

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQMEAA + GLT+ +A   ++LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 129 PKGQMEAARSSGLTYVQAMYYIVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 188

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  I  +T    ++ I + MF YL L++ +++ +     ++A
Sbjct: 189 GDLISTRTFVTFDVYIFVGMF-YLLLTVPLSMLVRYFEKRLA 229


>gi|228977335|ref|ZP_04137730.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228782312|gb|EEM30495.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
          Length = 206

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 54  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 101

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 102 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 161

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 162 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 204


>gi|326797190|ref|YP_004315010.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326547954|gb|ADZ93174.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 314

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 23/205 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS +LG++  L   R+S   H +  + L + Y+   +I G P LV I + Y        
Sbjct: 128 VFSIILGLIFGLM--RIS---HRQVLRNLAVTYVE--VIRGTPLLVQIFIVY-------- 172

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                FIG       F +   ALS +T A++AEIVR+G+ AVP GQMEAA +LG+ + +A
Sbjct: 173 ----FFIGTVFDLDRFTAGVAALSIFTGAYVAEIVRAGIQAVPTGQMEAARSLGMNYVQA 228

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V++PQA++  +PPL  Q++NL+K+SSL   +   DL   G  +++ +    E+    
Sbjct: 229 MCYVIMPQAIKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTV 288

Query: 371 MFIYL----SLSIMIALFMNRLNAK 391
             +YL    +LS  I +   RL+A 
Sbjct: 289 AALYLIVTGALSWAIQILEKRLSAS 313


>gi|295400876|ref|ZP_06810852.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312111274|ref|YP_003989590.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|294977139|gb|EFG52741.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311216375|gb|ADP74979.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 217

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 84/123 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YTAAFIAE++RSG++AVP+GQ EAA + GLT+ +  R ++LPQA++ +IPPL +Q
Sbjct: 92  LGLTVYTAAFIAEVIRSGILAVPKGQTEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+KNSS+   +   DL+  G  I ++T    ++ +     YL L+I ++L +  L  
Sbjct: 152 FINLVKNSSVLGVIAGLDLMYFGDLISSETFVTFDVYIFVALFYLVLTIPLSLGVGYLER 211

Query: 391 KIA 393
           ++A
Sbjct: 212 RLA 214


>gi|228906388|ref|ZP_04070272.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
 gi|228853300|gb|EEM98073.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
          Length = 218

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 104/162 (64%), Gaps = 16/162 (9%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA 214


>gi|291288058|ref|YP_003504874.1| polar amino acid ABC transporter, inner membrane subunit
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290885218|gb|ADD68918.1| polar amino acid ABC transporter, inner membrane subunit
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 316

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 115/211 (54%), Gaps = 17/211 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I ++S    I++ +  T L+R       K L + YI   +I G P LV I +       
Sbjct: 122 EISIYSIFFAIIIGVM-TGLARISKNPFLKKLSVFYIE--IIRGTPLLVQIFI------- 171

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                 F F  G+  + E M+  +A LS +T A+IAEIVR+G+ +V +GQMEAA +LG++
Sbjct: 172 ------FYFFIGTVFNLERMTAGVAALSVFTGAYIAEIVRAGIQSVHKGQMEAARSLGMS 225

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + KA  LV+LPQA R  +PP+  Q+++L+K+SSL   +   DL   G  ++  T    E+
Sbjct: 226 YPKAMVLVILPQAFRRTLPPMAGQFISLIKDSSLVSVISITDLTKAGREVVASTFSPFEV 285

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 +YL L+  ++  + RL  +++  ++
Sbjct: 286 WFTVAALYLVLTSALSYLVQRLEKRMSAMDR 316


>gi|194017220|ref|ZP_03055832.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
 gi|194011088|gb|EDW20658.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
          Length = 217

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 10/175 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL ++ T  +  +  + L+ + +   F  PVLG         V+  F +  IAL+ YT+A
Sbjct: 49  PLNWLGTAYVEFVRNIPLLLITFVFFFGLPVLG--------IVADGFTAGTIALAIYTSA 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAE +R+G+ AVP GQMEAA A GL++    R ++LPQA++ +IPPL +Q++NL+KNSS
Sbjct: 101 FIAEAIRAGIQAVPLGQMEAARASGLSYGGTMRYIILPQAIKIVIPPLGNQFINLVKNSS 160

Query: 340 -LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            L V  GF DL+  G  I ++T    ++ +     YL L+I ++L +  L  ++A
Sbjct: 161 ILGVIAGF-DLMYQGDLIASRTFVTFDVYIFVAMFYLLLTIPLSLGVGYLEKRLA 214


>gi|227893085|ref|ZP_04010890.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227865063|gb|EEJ72484.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 213

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG+  +L           K G+ +  +YI+ F    +P LV++ + Y L   + +
Sbjct: 28  IFSLILGVFFALLEVA-----PPKFGRVIAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VR+G+ ++  GQME A + G+T+ +A
Sbjct: 80  VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQAM+ +IPPL +Q++NL+KNSS LA   GF DL+     I   T Q I+  +I
Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFQTIDTYII 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL L++ ++ +M  L  K+A
Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 36.6 bits (83), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 32/62 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L GF NT   +   +I + I+G       ++  K    I +VY+ +FRNIP LV++  
Sbjct: 11  AFLTGFWNTILCSIIALIFSLILGVFFALLEVAPPKFGRVIAKVYIAIFRNIPLLVIVMI 70

Query: 148 LY 149
            Y
Sbjct: 71  FY 72


>gi|229171424|ref|ZP_04299009.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
 gi|228612128|gb|EEK69365.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
          Length = 218

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 104/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+            L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVVGITLNGFVAGTA----------TLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYTQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|229083878|ref|ZP_04216187.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-44]
 gi|228699456|gb|EEL52132.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-44]
          Length = 233

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 118/203 (58%), Gaps = 22/203 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LGI++++      R F    G A    Y+    I  +P LVLIA  +  +F  PV+G
Sbjct: 47  SFILGIIMAVMRIAPIR-FMNWFGTA----YVE--FIRNIP-LVLIA--FVFYFAFPVIG 96

Query: 253 QF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+ G++          AL+ YTAAFIAE +R+G+++VP+GQMEAA + GLT+ +A
Sbjct: 97  VTLNGFVAGTS----------ALTVYTAAFIAEAIRAGIMSVPKGQMEAARSSGLTYVQA 146

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V+LPQA++ +IPPL +Q+LNL+KNSS+   +   DL+  G  I  +T    ++ +  
Sbjct: 147 MYYVVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQGDLISTRTLVTFDVYIFV 206

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
              YL L++ +++ +     ++A
Sbjct: 207 GLFYLLLTVPLSMLVRYFEKRLA 229


>gi|315037816|ref|YP_004031384.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL
           1112]
 gi|325956291|ref|YP_004286901.1| glutamine ABC transporter permease [Lactobacillus acidophilus 30SC]
 gi|312275949|gb|ADQ58589.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL
           1112]
 gi|325332856|gb|ADZ06764.1| glutamine ABC transporter permease [Lactobacillus acidophilus 30SC]
 gi|327183110|gb|AEA31557.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL
           1118]
          Length = 213

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG+  +L           K G+ +  +YI+ F    +P LV++ + Y L   + +
Sbjct: 28  IFSLILGVFFALLKVA-----PPKFGRVIAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VR+G+ ++  GQME A + G+T+ +A
Sbjct: 80  VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQAM+ +IPPL +Q++NL+KNSS LA   GF DL+     I   T Q I+  +I
Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFQTIDTYII 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL L++ ++ +M  L  K+A
Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L GF NT   +   +I + I+G      +++  K    I +VY+ +FRNIP LV++  
Sbjct: 11  AFLTGFWNTILCSIIALIFSLILGVFFALLKVAPPKFGRVIAKVYIAIFRNIPLLVIVMI 70

Query: 148 LY 149
            Y
Sbjct: 71  FY 72


>gi|187929542|ref|YP_001900029.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|309781683|ref|ZP_07676416.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia
           sp. 5_7_47FAA]
 gi|187726432|gb|ACD27597.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|308919324|gb|EFP64988.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia
           sp. 5_7_47FAA]
          Length = 231

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 14/150 (9%)

Query: 249 PVLGQ--FNFIGGSTVSPEFM------------SLYIALSCYTAAFIAEIVRSGLIAVPR 294
           P+L    F + G   + PEF+            S  IAL  YTAA++AE +RSG+ ++P+
Sbjct: 69  PLLAHMLFWYFGAPQILPEFIRDWLYSMNYEAASAVIALVLYTAAYMAEDIRSGIRSIPK 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+EA+ ALGL+  +A RLV+LPQ++R  +PPL SQ LNL KNSS+A+ +G A+L+    
Sbjct: 129 EQLEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            + + T +  E        YL++SI I +F
Sbjct: 189 QVESATFRGFEAFAFATAAYLTISIAITVF 218


>gi|257887549|ref|ZP_05667202.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257823603|gb|EEV50535.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
          Length = 215

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 16/212 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLVLIALKYQL 244
           KI +FS VL +V SL    L   F     K +  L   Y+  F    +P L+++   Y +
Sbjct: 17  KITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSTLAKAYVEFFR--NIPLLIIVMFFYVV 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P+   FN  G       F +  I L+ YT+AFIAE VRSG+  VP+GQ EA ++ G
Sbjct: 75  ---VPIY-WFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAGLSSG 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T+ +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+  G  I ++T    
Sbjct: 124 FTYSEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASETFNTF 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I    YL +++ ++  M  L  K A++ 
Sbjct: 184 DTYIIVGLFYLVITLPLSYLMVYLEKKWAVRS 215



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    + GF  T + +   ++ + IIGTL+   +LS NK+V+ + + YVE FRNIP L
Sbjct: 6   QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSTLAKAYVEFFRNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|290968909|ref|ZP_06560446.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781205|gb|EFD93796.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
          Length = 222

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 17/218 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++  A      F+LG+V+S+   RLS     K  KA+ + Y++  ++ G P LV I L
Sbjct: 22  VTIEITAISVGLGFILGLVVSV--CRLSGW---KILKAVAVCYVN--ILRGTPLLVQIFL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F  P+L       G  ++P F++   A S  + A+++EI R+G+ AV RGQMEA 
Sbjct: 75  IY---FALPMLI------GQRINP-FLAAVAACSINSGAYVSEIFRAGIQAVDRGQMEAG 124

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +    ++LPQA R +IPPL ++++++ K +SL   +GF +L   G  II +T
Sbjct: 125 RSLGLSWMQTMWYIILPQAFRKVIPPLGNEFISMTKETSLVSVIGFEELTRRGQLIIAKT 184

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             + EI L    IYL +++ IA  ++ L  + A  ++ 
Sbjct: 185 YGSFEIWLTVAAIYLVMTLSIAQLVSYLERRFATDDRN 222


>gi|227551337|ref|ZP_03981386.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257896043|ref|ZP_05675696.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|293378785|ref|ZP_06624942.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|227179548|gb|EEI60520.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257832608|gb|EEV59029.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|292642578|gb|EFF60731.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 215

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 18/216 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+ ++    VFS ++G ++++F  +LS++   K   AL   Y+  F    +P L+++  
Sbjct: 18  ITLFSSVLALVFSLIIGTLMAIF--QLSKN---KIVSALAKAYVEFFR--NIPLLIIVMF 70

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +    P+   FN  G       F +  I L+ YT+AFIAE VRSG+  VP+GQ EA 
Sbjct: 71  FYVV---VPIY-WFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTVPKGQTEAG 119

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++ G T+ +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+  G  I ++T
Sbjct: 120 LSSGFTYPEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDLIASET 179

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +  +I    YL +++ ++  M  L  K A++ 
Sbjct: 180 FNTFDTYIIVGLFYLVITLPLSYLMVYLEKKWAVRS 215



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    + GF  T + +   ++ + IIGTL+   +LS NK+V+ + + YVE FRNIP L
Sbjct: 6   QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKIVSALAKAYVEFFRNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|78357807|ref|YP_389256.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220212|gb|ABB39561.1| amino acid ABC transporter membrane protein 2, PAAT family / amino
           acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 596

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 85/134 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF     AL  YT +F+AE++R+GL ++P+G +EAA + GL++ +    ++LP A R+II
Sbjct: 138 EFWCAVSALGVYTGSFMAEVIRAGLQSIPKGLLEAAYSSGLSYFQVLTRIILPLAFRTII 197

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL S++LN +KNSSLA+ +G A+L      + + T +  E       +YLSLS++I+  
Sbjct: 198 PPLGSEFLNNMKNSSLAMVIGVAELTWHSQQVQSLTFRGFEATTAATVLYLSLSLIISFI 257

Query: 385 MNRLNAKIALKEKK 398
           MN +N K+ L   +
Sbjct: 258 MNGVNGKLRLDTMQ 271



 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 96/168 (57%), Gaps = 19/168 (11%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           SF +G+ + L     +R F       LP L+YI   +I G P +++I   + ++F  PV+
Sbjct: 404 SFFIGLAVGLGRCARNRIFR------LPCLVYIE--IIRGNPLIIVI---FWIYFFLPVV 452

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F         F S  IAL+ +T A++AEIVR+G+  +P GQ+EAA + GL++ +  
Sbjct: 453 FGAYF-------DVFWSATIALTVFTGAYLAEIVRAGVQNIPAGQVEAAYSTGLSYFQTM 505

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           R ++LPQA++ +IP +  Q++ + K++SLA  +G  +L  V   + N+
Sbjct: 506 RRIVLPQALKQMIPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLDNR 553



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 5/93 (5%)

Query: 69  GFEIDQGIVPYTSDSSY----ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G++ +  ++ YT + +Y       +L G V T  ++      A  +GT++G  RLSA + 
Sbjct: 34  GYQFEWSVL-YTQNETYKLNLGAEMLRGLVTTVNISLISSALALGLGTMLGLARLSAFRP 92

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +     V VE FRN P LV +FF Y +  +VLP
Sbjct: 93  LRISASVVVEFFRNTPLLVQLFFWYFAFPNVLP 125



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IG  VG GR + N++    C VY+E+ R  P ++VIF++Y
Sbjct: 407 IGLAVGLGRCARNRIFRLPCLVYIEIIRGNPLIIVIFWIY 446


>gi|229028440|ref|ZP_04184562.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
 gi|228732889|gb|EEL83749.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
          Length = 218

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 104/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+            L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGTA----------TLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|42779787|ref|NP_977034.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206978169|ref|ZP_03239051.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|42735704|gb|AAS39642.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206743641|gb|EDZ55066.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
          Length = 218

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|323702153|ref|ZP_08113820.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532840|gb|EGB22712.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum nigrificans DSM 574]
          Length = 221

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 87/129 (67%), Gaps = 1/129 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S  + A++AEI R+G+ ++ RGQMEAA +LG+T+ +A R ++LPQA + +IPPL ++
Sbjct: 93  VACSLNSGAYVAEIFRAGIQSIERGQMEAARSLGMTYAQAMRYIILPQAFKRVIPPLGNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA-LFMNRLN 389
           ++ ++K++SL   +G A+L   G  II  T +AIEI L    IYL ++++I+  F++R+ 
Sbjct: 153 FIAMMKDTSLVSVIGLAELARTGQLIIATTYRAIEIWLAVALIYLIMTLLISHFFVHRME 212

Query: 390 AKIALKEKK 398
            ++   +  
Sbjct: 213 RRLKTSDHS 221


>gi|322418598|ref|YP_004197821.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320124985|gb|ADW12545.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 234

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 124/213 (58%), Gaps = 11/213 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI-STFLIFGLPTLVLIA 239
           +T++ +A   V +F+LG+++++   ++S HF        PL +I S +L F   T +LI 
Sbjct: 26  ITLELSAVGIVGAFILGLLIAVL--KMS-HFR-------PLRWIASAYLEFFRNTPLLIQ 75

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +       +L        ++ + EF +  IAL+ YT+AFIAE +RSG++++P+ QMEA
Sbjct: 76  IFFWYFGSYKILPTVVNDWLNSTNFEFAAAAIALTIYTSAFIAEDIRSGILSIPKEQMEA 135

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + G ++ ++ + ++LPQA+R  +PPL +Q+LNL KNSSLA+ +G  +L      + + 
Sbjct: 136 ARSAGFSYLRSMQYIILPQAVRITVPPLVNQFLNLTKNSSLAMTIGVMELTYQARQVESY 195

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +  E       +YL LS+ I   ++  + K+
Sbjct: 196 SFKGFEAFTAATVVYLVLSVSITALIDLYDKKV 228



 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 76  IVPYTSDSSYATA------ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           ++ YT D S  T+      ++ G   T  L+  G++ A I+G L+   ++S  + + WI 
Sbjct: 1   MLKYTFDWSIVTSGKYFEWLVSGVKITLELSAVGIVGAFILGLLIAVLKMSHFRPLRWIA 60

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             Y+E FRN P L+ IFF Y     +LP
Sbjct: 61  SAYLEFFRNTPLLIQIFFWYFGSYKILP 88


>gi|2961080|gb|AAC05644.1| unknown [Pseudomonas marginalis pv. alfalfae]
          Length = 154

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 5/102 (4%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  FNF+GG  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL     
Sbjct: 2   LSGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPT 61

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-----GFA 347
            R V++PQA+R IIPPLTSQYLNL KNSSLA  +     GFA
Sbjct: 62  LRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIRLPGNGFA 103


>gi|326797152|ref|YP_004314972.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326547916|gb|ADZ93136.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 315

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 23/205 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG++  L   R+S   H +  + L + Y+   +I G P LV I + Y        
Sbjct: 129 IFSIILGLIFGLM--RIS---HRQVLRNLAVTYVE--VIRGTPLLVQIFIVY-------- 173

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                FIG       F +   ALS +T A++AEIVR+G+ AVP GQMEAA +LG+ + +A
Sbjct: 174 ----FFIGTVFDLDRFTAGVAALSIFTGAYVAEIVRAGIQAVPTGQMEAARSLGMNYVQA 229

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V++PQA++  +PPL  Q++NL+K+SSL   +   DL   G  +++ +    E+    
Sbjct: 230 MCYVVMPQAIKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTV 289

Query: 371 MFIYL----SLSIMIALFMNRLNAK 391
             +YL    +LS  I +   RL+A 
Sbjct: 290 AALYLVVTGALSWAIQILEQRLSAS 314


>gi|145298524|ref|YP_001141365.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851296|gb|ABO89617.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 319

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 5/166 (3%)

Query: 233 PTLVLIALKY-QLHFDKPVLGQ----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P L  +A+ Y +L    P+L Q    + FIG       F +   AL+ +T A++AEIVR+
Sbjct: 151 PALRNLAVTYVELIRGTPLLVQIFIVYFFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRA 210

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQMEA  +LGLT  +  R V+LPQA + ++PPL  Q++NL+K+SSL   +   
Sbjct: 211 GISSIHKGQMEAGRSLGLTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISIT 270

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL   G  +++ T    E+      +YL L+  ++  + RL  K A
Sbjct: 271 DLTKAGREVVSSTFSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYA 316


>gi|241663661|ref|YP_002982021.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240865688|gb|ACS63349.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 231

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 87/143 (60%), Gaps = 12/143 (8%)

Query: 254 FNFIGGSTVSPEFM------------SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           F + G   + PEF+            S  IAL  YTAA++AE +RSG+ ++P+ Q+EA+ 
Sbjct: 76  FWYFGAPQILPEFIRDWLYSMNYEAASAVIALVLYTAAYMAEDIRSGIRSIPKEQLEASR 135

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL+  +A RLV+LPQ++R  +PPL SQ LNL KNSS+A+ +G A+L+     + + T 
Sbjct: 136 ALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSIAMVIGVAELMYQAQQVESATF 195

Query: 362 QAIEIILIWMFIYLSLSIMIALF 384
           +  E        YL++SI I +F
Sbjct: 196 RGFEAFAFATAAYLTISIAITVF 218


>gi|167581948|ref|ZP_02374822.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis TXDOH]
          Length = 241

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 18/149 (12%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-----FIGGSTV---SPEFMSLYI 271
           PL+    F  FG+ +L+           +PV+   N      +GG  +   S EF++ ++
Sbjct: 64  PLVVQLLFWYFGVASLL----------PEPVMAWLNTRRAAVVGGVELHWPSFEFVAGWV 113

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LSCYT+AF+AE  ++GL  VP GQ  AA ALGL+ R+  R V+LPQA+R  +PPL  QY
Sbjct: 114 GLSCYTSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQY 173

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +NL+KNSSL +A+G A+L      +  +T
Sbjct: 174 MNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|229101401|ref|ZP_04232145.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-28]
 gi|228682106|gb|EEL36239.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-28]
          Length = 218

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------LTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|320177111|gb|EFW52127.1| putative amino-acid ABC transporter permease protein yhdX [Shigella
           dysenteriae CDC 74-1112]
          Length = 155

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 82/141 (58%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL+NRGL  P+  +      F+ + V+ IVLS+   R ++ +  KT +       +  LI
Sbjct: 8   FLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTRQLRRTWPFAAVLI 67

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIAEI+R+G 
Sbjct: 68  IGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGS 127

Query: 290 IAVPRGQMEAAIALGLTHRKA 310
            AVP GQ EAA +LGL + ++
Sbjct: 128 QAVPYGQHEAARSLGLRYARS 148


>gi|229188846|ref|ZP_04315880.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 10876]
 gi|228594659|gb|EEK52444.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 10876]
          Length = 218

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 106/165 (64%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  +DL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGSDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|222094395|ref|YP_002528454.1| ABC transporter , permease; glutamine ABC transporter , permease
           [Bacillus cereus Q1]
 gi|221238452|gb|ACM11162.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus Q1]
          Length = 177

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 105/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 25  LVLIAFIF--YFALPVVGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 72

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 73  AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 132

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 133 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 175


>gi|330830267|ref|YP_004393219.1| amino acid ABC transporter permease [Aeromonas veronii B565]
 gi|328805403|gb|AEB50602.1| Amino acid ABC transporter, permease protein [Aeromonas veronii
           B565]
          Length = 319

 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 5/166 (3%)

Query: 233 PTLVLIALKY-QLHFDKPVLGQ----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P L  +A+ Y +L    P+L Q    + FIG       F +   AL+ +T A++AEIVR+
Sbjct: 151 PALRNLAITYVELIRGTPLLVQIFIVYFFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRA 210

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQMEA  +LG+T  +  R V+LPQA + ++PPL  Q++NL+K+SSL   +   
Sbjct: 211 GISSIHKGQMEAGRSLGMTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISIT 270

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL   G  +++ T    E+      +YL L+  ++  + RL  K A
Sbjct: 271 DLTKAGREVVSSTFSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYA 316



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 6/87 (6%)

Query: 69  GFEIDQGIVPYTSD------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           G ++ +G   +  D      S  A  I  G   T  L+    I A ++GTL G  RLS N
Sbjct: 91  GVQVAEGDTVFRGDTLDTQLSWTAGPIAWGVWVTVKLSLVAGIFAILLGTLAGLARLSPN 150

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLY 149
             +  +   YVE+ R  P LV IF +Y
Sbjct: 151 PALRNLAITYVELIRGTPLLVQIFIVY 177


>gi|303256934|ref|ZP_07342948.1| glutamine ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|330998815|ref|ZP_08322542.1| glutamine ABC transporter, permease protein GlnP [Parasutterella
           excrementihominis YIT 11859]
 gi|302860425|gb|EFL83502.1| glutamine ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|329576029|gb|EGG57548.1| glutamine ABC transporter, permease protein GlnP [Parasutterella
           excrementihominis YIT 11859]
          Length = 223

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 13/211 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I   S  LG+++ +F   +++    +  + L  +Y+    I G P LV I L Y   F 
Sbjct: 26  EITALSVGLGLLIGMFVG-VAKLSDNRLIRGLASVYVDC--IRGTPLLVQIFLVY---FA 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P       I G  + P F++   A S  + A++AEI R+G+ ++ +GQMEA+ ALGL  
Sbjct: 80  LPQ------IIGHRIDP-FVAAVGACSINSGAYVAEIFRAGIQSIDKGQMEASRALGLNW 132

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +A R V++PQA + IIPPL ++++ +LK+SSL   +GF +L   G  II++T  A EI 
Sbjct: 133 FQAMRFVIMPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRTGQLIISRTYAAFEIW 192

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++   +YL +++ I+ F+  L  + +   +K
Sbjct: 193 IVVALLYLIMTLAISRFVALLEKRFSKGTRK 223



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +IG  VG  +LS N+L+  +  VYV+  R  P LV IF +Y
Sbjct: 37  LIGMFVGVAKLSDNRLIRGLASVYVDCIRGTPLLVQIFLVY 77


>gi|218678602|ref|ZP_03526499.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 894]
          Length = 134

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 79/115 (68%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L +A+   +A+FIAE VR  + A+P+ Q EAA +LGL+ R     ++LPQ  R ++P  
Sbjct: 3   ALLLAIVVSSASFIAETVRGAIDALPKAQWEAAGSLGLSRRDTVNDIILPQVFRVVLPSF 62

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +QY++L KN++L +AVG+ DL ++ GTI NQTG ++E I+I M  YL LS +I+
Sbjct: 63  GNQYISLTKNTALGIAVGYPDLFNIYGTIANQTGHSLEGIIIVMASYLILSWIIS 117


>gi|226942879|ref|YP_002797952.1| Amino acid ABC transporter permease [Azotobacter vinelandii DJ]
 gi|226717806|gb|ACO76977.1| Amino acid ABC transporter, permease protein [Azotobacter
           vinelandii DJ]
          Length = 247

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 83/135 (61%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S  +  ++S+ + L  +TAA + E VR+G+ A+PRGQ  AA ALGL   +  R VLLPQA
Sbjct: 105 SPATSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQTAAAQALGLRSGQIYRQVLLPQA 164

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R IIPPLTS++LN++KNSS+A  +G  +L++        T    E   +   IY +L++
Sbjct: 165 FRIIIPPLTSEFLNIIKNSSVASLIGLMELLAQTRQTAEFTTNLFEAFTLATLIYFTLNM 224

Query: 380 MIALFMNRLNAKIAL 394
            + LFM  +  K+A+
Sbjct: 225 SLMLFMRWIEKKVAV 239



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            D  Y    + GF  T  +A  G I A ++G+L+G  R   N+ ++ I   YVE+FRN+P
Sbjct: 17  GDEIYLDWFVAGFGWTLAVALVGWIIALLLGSLLGVLRTLPNRWLSGIASAYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIP 159
            LV +F  Y  V  +LP P
Sbjct: 77  LLVQLFLWYFLVPDLLPTP 95


>gi|133723150|gb|ABO37821.1| GlnP [Lactococcus garvieae]
          Length = 237

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           FV + ++G++  LF      A R     +    +++PLL ++ F+ +G+P ++ +   +Q
Sbjct: 45  FVLAMIVGVIFGLFSASPSPALRTISRIYVDLNRSIPLLVLTIFIFYGIPNMLQLITGHQ 104

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +                 EF +  IAL+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 105 SPLN-----------------EFTAGVIALTLNESAYIAEIVRGGIAAVPTGQMEASRSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ + K  R V+LPQA++  IP L +Q++  LK+++L   +G  +L+  G  I+ +  QA
Sbjct: 148 GIPYVKTMRKVILPQAVKITIPSLINQFIITLKDTTLVSVIGLVELLQAGQIIVARNFQA 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +   IY+ + +++     R+  K+
Sbjct: 208 FRVYGLIGLIYMVVLLLLMWAGRRIEQKM 236


>gi|296389384|ref|ZP_06878859.1| putative amino acid permease [Pseudomonas aeruginosa PAb1]
          Length = 238

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 10/172 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    F  FG+P L+  AL   L+   + P+L   +F        EF++    L+ YT
Sbjct: 65  PLLVQLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAAAWGLTLYT 116

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +AF+AE  R+G+ +V   Q  A +ALGLT R+  R+V+LPQA+R+ +PPL  QY+N LKN
Sbjct: 117 SAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKN 176

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           SSLA+A+G A+L      +  +T +  +   I   +Y+    +I  F   L 
Sbjct: 177 SSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQ 228



 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           IG  +   RLS  +L++W  R Y+ +FRN P LV +FF Y  V ++LP
Sbjct: 35  IGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLP 82


>gi|89072893|ref|ZP_01159450.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89051415|gb|EAR56870.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 272

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 115/213 (53%), Gaps = 19/213 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+  +A   +F+ + G+V +L   RLS   H   G++L   YI   +I   P LV I L
Sbjct: 75  ITIKISAISLIFTVIFGLVTALL--RLS---HSIVGRSLARGYIE--VIRNTPLLVQIYL 127

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +    PVLG             F +  + LS +  A+ AEI RSGL+ +P+GQ EAA
Sbjct: 128 LYFVF--GPVLGL----------ERFTTAVLGLSLFQGAYTAEIFRSGLMNIPKGQFEAA 175

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+   + R ++LPQ +R I+P LT++ ++L+KNSS+   +   DL + G  I+  T
Sbjct: 176 ESLGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVADT 235

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               EI      +YL ++++++ F   L  K+A
Sbjct: 236 AMPFEIWFTIAAMYLCITLLLSAFATLLEHKLA 268


>gi|117620284|ref|YP_857306.1| amino acid ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117561691|gb|ABK38639.1| amino acid ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 326

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 5/166 (3%)

Query: 233 PTLVLIALKY-QLHFDKPVLGQ----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P L  +A+ Y +L    P+L Q    + FIG       F +   AL+ +T A++AEIVR+
Sbjct: 158 PALRNLAVTYVELIRGTPLLVQIFIVYFFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRA 217

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQMEA  +LG+T  +  R V+LPQA + ++PPL  Q++NL+K+SSL   +   
Sbjct: 218 GISSIHKGQMEAGRSLGMTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISIT 277

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL   G  +++ T    E+      +YL L+  ++  + RL  K A
Sbjct: 278 DLTKAGREVVSSTFSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYA 323


>gi|291298120|ref|YP_003509398.1| polar amino acid ABC transporter inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
 gi|290567340|gb|ADD40305.1| polar amino acid ABC transporter, inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
          Length = 285

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 128/236 (54%), Gaps = 42/236 (17%)

Query: 177 SFPTL-------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK---TG-----KALPL 221
           SFP L       T+   A  +V  F LGI++++   RLS     +   TG     + LP 
Sbjct: 70  SFPELFTVALANTVIYTASGYVVGFALGILIAVM--RLSSAAVNRWIATGFIEIFRGLPA 127

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L I TFL F  P          + F   ++   N+    TV+       + L   +AA++
Sbjct: 128 LLILTFLAFFWP----------VAFPNLIIPGGNY---GTVA-------LGLGLCSAAYM 167

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+G+ AVP+GQMEAA +LG++H +A   ++LPQA+R +IPPLT++ + L K+SSL 
Sbjct: 168 AETFRAGIQAVPKGQMEAARSLGMSHTRAMVTIILPQAVRIVIPPLTNELILLTKDSSLV 227

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + VG A    DLV  G  + N+TG +  +++  +  +L ++I +++ + RL A+ A
Sbjct: 228 LTVGIAAKESDLVKFGNDLANETGNSTPLVVAGL-AFLVITIPLSILVRRLEARQA 282



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S+     V   NT     SG +    +G L+   RLS+  +  WI   ++E+FR +P 
Sbjct: 68  ERSFPELFTVALANTVIYTASGYVVGFALGILIAVMRLSSAAVNRWIATGFIEIFRGLPA 127

Query: 142 LVVIFFL 148
           L+++ FL
Sbjct: 128 LLILTFL 134


>gi|17230679|ref|NP_487227.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Nostoc sp. PCC 7120]
 gi|17132282|dbj|BAB74886.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Nostoc sp. PCC 7120]
          Length = 501

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 145/284 (51%), Gaps = 42/284 (14%)

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT--NA 187
           ++Y + F+  PP +    LY++  +       +++L F           PTL        
Sbjct: 242 QIYQKWFKVEPPSLPDKSLYENQTNTHKSGSINLILQF----------LPTLLQGALVTI 291

Query: 188 KIFVFSFVLGIVL-SLFA-TRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLIALKYQ 243
           ++ + S VLG++  +L A TRLS+    +       L+   ++ F  G P LV I   + 
Sbjct: 292 QLTILSTVLGLICGTLIALTRLSQFTPAR-------LFARAYVDFFRGTPLLVQI---FM 341

Query: 244 LHFDKPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           ++F  P L Q     FNF         +++  IALS   AA+IAEIVR+G+ ++  GQ E
Sbjct: 342 IYFGIPALAQQLGFTFNF-------DRWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTE 394

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LGL      RLV+ PQA R ++PPL +++++LLK++SL   +GF +L   G  I+ 
Sbjct: 395 AAKSLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVA 454

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRL----NAKIALKEKK 398
              +A EI      +YL L+++ +  ++RL    N  +  +++K
Sbjct: 455 DNYRAFEIYAAVAIVYLCLTLLASQVLSRLEMWMNPTMKAQQRK 498


>gi|295398549|ref|ZP_06808582.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Aerococcus viridans ATCC 11563]
 gi|294973213|gb|EFG49007.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Aerococcus viridans ATCC 11563]
          Length = 217

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 88/133 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L+ YT+AFIA++VRSG+ AVP GQ EAAI+ G+T+ +  + V+LPQA++ +IP
Sbjct: 85  FQSGIIGLTLYTSAFIADVVRSGIDAVPEGQKEAAISQGMTYVQTMQYVVLPQAVKIVIP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++NL+KNSS+   V   DL+  G  I ++T   +    +   +YL +++ + L +
Sbjct: 145 PLGNQFINLVKNSSILAMVAGLDLMYYGDLIASETFNTLGTYTMIAGMYLVITVPLTLLV 204

Query: 386 NRLNAKIALKEKK 398
           + +  ++A ++ +
Sbjct: 205 SYIEKRLAQQDVR 217



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 43/67 (64%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++Y+  I+ GF+NT   +   +I + I+G LVG  +   NK++A I  +YVE FRNIP L
Sbjct: 6   TNYSDLIIEGFINTLIASVIALIASLILGGLVGIFQTLDNKVLAKIGDIYVEFFRNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|319946946|ref|ZP_08021180.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319746994|gb|EFV99253.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 754

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 110/210 (52%), Gaps = 27/210 (12%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R +        + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 562 FAIAMVIGIIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFIFWGIPNLIESMTGHQ 621

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ 
Sbjct: 622 -------------------SPINDFLAGTIALSLNAAAYIAEIVRGGIQAVPAGQMEASR 662

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 663 SLGISYSKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNY 722

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           Q+ ++  I    YL +  ++  F  RL  +
Sbjct: 723 QSFKMYAILAVFYLVIITLLTRFAKRLEKR 752


>gi|312865954|ref|ZP_07726175.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus downei F0415]
 gi|311098358|gb|EFQ56581.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus downei F0415]
          Length = 731

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  + A   ++             + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 539 FAIAMVIGIIFGMMAVAPNKILQGIAKVFVDVVRGIPLMIVAAFIYWGIPNLIESITGHQ 598

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS   AA+IAEIVR G+ AVP+GQMEA+ 
Sbjct: 599 -------------------SPINDFVAATIALSLNAAAYIAEIVRGGIEAVPKGQMEASR 639

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+ + K  R V+LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 640 SLGIPYGKTMRKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 699

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  K+
Sbjct: 700 QSFRMYAILAIIYLVIITLLTRLAKRLERKL 730


>gi|260102750|ref|ZP_05752987.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260083443|gb|EEW67563.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
          Length = 213

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG+  +L           K GK +  +YI+ F    +P LV++ + Y L   + +
Sbjct: 28  IFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VR+G+ ++  GQME A + G+T+ +A
Sbjct: 80  VKLSGFQAGT----------IGLTLYTSAFIAETVRAGISSISTGQMEGARSNGMTYTQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQAM+ +IPPL +Q++NL+KNSS LA   GF DL+     I   T + I+  ++
Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYVV 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL L++ ++ +M  L  K+A
Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           + L GF NT   +   +I + I+G       ++  K    + +VY+ +FRNIP LV++  
Sbjct: 11  SFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIVMI 70

Query: 148 LY 149
            Y
Sbjct: 71  FY 72


>gi|148544725|ref|YP_001272095.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184154077|ref|YP_001842418.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|227363850|ref|ZP_03847955.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|227544432|ref|ZP_03974481.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908279|ref|ZP_07125744.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|325683060|ref|ZP_08162576.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus reuteri MM4-1A]
 gi|68160714|gb|AAY86803.1| lr0524 [Lactobacillus reuteri]
 gi|148531759|gb|ABQ83758.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183225421|dbj|BAG25938.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|227071077|gb|EEI09395.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|227185595|gb|EEI65666.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300894526|gb|EFK87883.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|324977410|gb|EGC14361.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus reuteri MM4-1A]
          Length = 212

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 82/124 (66%), Gaps = 2/124 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE VR+G+ ++  GQME A+A GLT+ +A R ++LPQA R +IPPL +Q
Sbjct: 90  IGLTLYTSAFIAETVRAGINSIDPGQMEGALANGLTYGQAMRYIVLPQAFRVVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I N T   +    I   +YL +++ ++ +M  L 
Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGNLIANDTLATMPTYFIVGIMYLIITLPLSYYMRHLE 208

Query: 390 AKIA 393
            K+A
Sbjct: 209 KKLA 212



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI--F 146
           +L G  NT   +   +I + IIGT      +S ++++  I  VYVEVFRNIP LV+   F
Sbjct: 12  LLTGLWNTILCSLIALIGSLIIGTFFALLEISQHRVLKIIGHVYVEVFRNIPLLVITMAF 71

Query: 147 FL 148
           FL
Sbjct: 72  FL 73


>gi|312866757|ref|ZP_07726971.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus parasanguinis F0405]
 gi|311097838|gb|EFQ56068.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus parasanguinis F0405]
          Length = 218

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  +F+       R +        + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 26  FAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFIFWGIPNLIESVTGHQ 85

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +       +F+ G+          IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 86  SPIN-------DFVAGT----------IALSLNAAAYIAEIVRGGIQAVPAGQMEASRSL 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 129 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 188

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++  F  +L  K+
Sbjct: 189 FKMYAILAVFYLVIITLLTRFAKKLEKKV 217


>gi|194466984|ref|ZP_03072971.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194454020|gb|EDX42917.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 212

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 82/124 (66%), Gaps = 2/124 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE VR+G+ ++  GQME A+A GLT+ +A R ++LPQA R +IPPL +Q
Sbjct: 90  IGLTLYTSAFIAETVRAGINSIDPGQMEGALANGLTYGQAMRYIVLPQAFRVVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I N T   +    I   +YL +++ ++ +M  L 
Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGNLIANDTLATMPTYFIVGIMYLIITLPLSYYMRHLE 208

Query: 390 AKIA 393
            K+A
Sbjct: 209 KKLA 212



 Score = 42.7 bits (99), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI--F 146
           +L G  NT   +   +I + IIGT      +S +++V  I  VYVEVFRNIP LV+   F
Sbjct: 12  LLTGLWNTILCSLIALIGSLIIGTFFALLEISQHRVVKIIGHVYVEVFRNIPLLVITMAF 71

Query: 147 FL 148
           FL
Sbjct: 72  FL 73


>gi|229074425|ref|ZP_04207457.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-18]
 gi|228708709|gb|EEL60850.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-18]
          Length = 218

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|238927195|ref|ZP_04658955.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           inner membrane subunit [Selenomonas flueggei ATCC 43531]
 gi|238884977|gb|EEQ48615.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           inner membrane subunit [Selenomonas flueggei ATCC 43531]
          Length = 223

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 15/222 (6%)

Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP L +      +I V S  +G V+ L    ++R  H +  + L  +Y+  F   G P 
Sbjct: 15  SFPLLLVGAGVTIQITVLSTAIGFVIGLIVG-VARISHLRPLRMLAEVYVEFFR--GTPL 71

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y   F  PV      I G  + P F++   A    + A++AEI R+G+ +V  
Sbjct: 72  LVQIFLFY---FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDE 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA  +LG+T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G 
Sbjct: 122 GQMEAGRSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            II +T  + EI +    IYL +++ I+ F+  L  +  + +
Sbjct: 182 LIIAKTYGSFEIWMSVAVIYLVMTLTISRFVAYLERRCRVHD 223



 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           +IG +VG  R+S  + +  +  VYVE FR  P LV IF  Y +    LP+     + PF
Sbjct: 39  VIGLIVGVARISHLRPLRMLAEVYVEFFRGTPLLVQIFLFYFA----LPVITGQRIDPF 93


>gi|146310839|ref|YP_001175913.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145317715|gb|ABP59862.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 246

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VRSG+ ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FVSSMLCLGLFTAARVCEQVRSGIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINTVIMLVM 230

Query: 386 NRLNAKIAL 394
           N +  K  L
Sbjct: 231 NLVERKTRL 239



 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 20/140 (14%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   +  GF  T  L+ +  I A ++G+L G  R   N+ ++ +  +YVE+FRN+P 
Sbjct: 18  NTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSLGTLYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +V  F  Y  V  +LP               N G+ F +  +D N + FV S    + L 
Sbjct: 78  IVQFFTWYLVVPELLP--------------ENLGMWFKS-ELDPNIQFFVSSM---LCLG 119

Query: 202 LF-ATRLSRHFHEKTGKALP 220
           LF A R+         ++LP
Sbjct: 120 LFTAARVCEQVRSGI-QSLP 138


>gi|304437141|ref|ZP_07397102.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369803|gb|EFM23467.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 223

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 15/222 (6%)

Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP L +      +I V S  +G V+ L    ++R  H +  + L  +Y+  F   G P 
Sbjct: 15  SFPLLLVGAGVTIQITVLSTAIGFVIGL-VVGVARISHLRPLRMLAEVYVEFFR--GTPL 71

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y   F  PV      I G  + P F++   A    + A++AEI R+G+ +V  
Sbjct: 72  LVQIFLFY---FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDE 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA  +LG+T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G 
Sbjct: 122 GQMEAGRSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            II +T  + EI +    IYL +++ I+ F+  L  +  + +
Sbjct: 182 LIIAKTYGSFEIWMSVAVIYLVMTLTISRFVAYLERRCRVHD 223



 Score = 36.2 bits (82), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           +IG +VG  R+S  + +  +  VYVE FR  P LV IF  Y +    LP+     + PF
Sbjct: 39  VIGLVVGVARISHLRPLRMLAEVYVEFFRGTPLLVQIFLFYFA----LPVITGQRIDPF 93


>gi|257869446|ref|ZP_05649099.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257803610|gb|EEV32432.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 215

 Score = 99.8 bits (247), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 82/126 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE +RSG+  VP+GQMEA+++ G T+ +A R ++LPQA + ++PPL +Q
Sbjct: 90  IGLTIYTSAFIAETIRSGIQTVPKGQMEASLSSGFTYSQAMRYIILPQAFKIVVPPLGNQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+KNSS+   V   D++  G  I ++T    +  +I    YL +++ ++  M  L  
Sbjct: 150 FINLVKNSSILAMVAGLDIMYQGDLIASETFNTFDTYIIVGIFYLIITLPLSYLMVYLER 209

Query: 391 KIALKE 396
           + A++ 
Sbjct: 210 RWAVRS 215



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      GF  T + +   +  + +IGTL+   +LS N+ V  I + YVE FRNIP L
Sbjct: 6   QTYGDQFFSGFKYTIFSSLLALFFSLVIGTLMAIFQLSTNRWVKGIAKAYVEFFRNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|323697542|ref|ZP_08109454.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457474|gb|EGB13339.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 238

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 117/207 (56%), Gaps = 18/207 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG+   L   R+SR +  K      + YI   +I G+P L+LI   +  ++  PV+ 
Sbjct: 47  AFWLGLAAGLM--RMSRRWWIKIPA---VCYIE--VIRGMPLLLLI---FWFYYLAPVIT 96

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             N        P F +  +    +T A++ EIVR+G+ A+P+GQMEAA + GL+H +A +
Sbjct: 97  GQNL-------PAFSTTMVCFMIFTGAYVGEIVRAGVKALPKGQMEAARSTGLSHVQAMQ 149

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWM 371
           LV+LPQA+R++IP   +Q+++L K++SLA  +G  +L   G  + N +T  + EI +   
Sbjct: 150 LVILPQALRNMIPSFVNQFVSLTKDTSLAAILGVIELTRTGIQVDNRETVASFEIWITIA 209

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            +Y  +  ++  +  RL A+++  + +
Sbjct: 210 CLYFLICYILTSYSRRLEAQLSRYQAR 236


>gi|152997696|ref|YP_001342531.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150838620|gb|ABR72596.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 315

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 15/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V S V  +V+ LFA  L+R       + L + YI   LI G P LV I + Y     
Sbjct: 122 QLSVVSLVFAVVIGLFAG-LARISTNPALRYLSVTYIE--LIRGTPLLVQIFIFY----- 173

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   FIG       F +   ALS +T A+IAEIVRSG+ ++  GQMEAA +LG+ +
Sbjct: 174 -------FFIGTVLDLDRFTAGVAALSVFTGAYIAEIVRSGIQSISPGQMEAARSLGMNY 226

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +A   V+LPQA +  +PP+  Q++NL+K+SSL   +   DL   G  +++ T    E+ 
Sbjct: 227 VQAMVNVILPQAFKRTLPPMAGQFINLIKDSSLVSVISITDLTKAGREVVSSTFAPFEVW 286

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +YL L+  ++  + RL  +++  +
Sbjct: 287 FAVALMYLVLTGGLSWAIQRLEKRLSASD 315



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 35/67 (52%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L+   ++ A +IG   G  R+S N  + ++   Y+E+ R  P LV IF  Y  
Sbjct: 116 GLVMTLQLSVVSLVFAVVIGLFAGLARISTNPALRYLSVTYIELIRGTPLLVQIFIFYFF 175

Query: 152 VLSVLPI 158
           + +VL +
Sbjct: 176 IGTVLDL 182


>gi|154249738|ref|YP_001410563.1| polar amino acid ABC transporter, inner membrane subunit
           [Fervidobacterium nodosum Rt17-B1]
 gi|154153674|gb|ABS60906.1| polar amino acid ABC transporter, inner membrane subunit
           [Fervidobacterium nodosum Rt17-B1]
          Length = 216

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 99/163 (60%), Gaps = 11/163 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I++ Y   F  P LG         ++P + +   AL   + A+IAEIVR+G+ 
Sbjct: 63  GTPLLVQISIVY---FGLPQLG-------IQLAP-YPAAITALGLNSGAYIAEIVRAGIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA +LGLTH +A R V+LPQA R+I+P L ++++ L K+SSLA  +G ++L+
Sbjct: 112 SIPKGQYEAARSLGLTHWQAMRYVILPQAFRNILPALGNEFITLTKDSSLASVIGVSELM 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  +I++T Q   I     FIY  ++ +I+  +  +  ++A
Sbjct: 172 RSGQFVISRTFQTFSIYFGIAFIYFIMTFVISRLVRYIERRMA 214



 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 25/41 (60%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+GT +G GRLS  KL+ + C  YVE  R  P LV I  +Y
Sbjct: 34  ILGTFIGMGRLSKIKLINYPCTAYVEFLRGTPLLVQISIVY 74


>gi|30018826|ref|NP_830457.1| glutamine transport system permease protein glnP [Bacillus cereus
           ATCC 14579]
 gi|229126072|ref|ZP_04255094.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-Cer4]
 gi|29894368|gb|AAP07658.1| Glutamine transport system permease protein glnP [Bacillus cereus
           ATCC 14579]
 gi|228657394|gb|EEL13210.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-Cer4]
          Length = 218

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 105/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTA FIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTATFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQA++ ++PPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVVPPLGNQFLNLVKNSSILGIIAGADLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|171779932|ref|ZP_02920836.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281280|gb|EDT46715.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 743

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  + A   ++     +       + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 551 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDVVRGIPLMIVAAFIFWGIPNLIESMTGHQ 610

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P+              +F++  IALS    A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 611 ----SPI-------------NDFLAATIALSLNAGAYIAEIVRGGIEAVPKGQMEASRSL 653

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 654 GISYGKTMKKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 713

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   IYL +  ++     RL  ++
Sbjct: 714 FRMYAILAIIYLVIITLLTRLAKRLEKRL 742


>gi|161507108|ref|YP_001577062.1| glutamine ABC transporter permease [Lactobacillus helveticus DPC
           4571]
 gi|160348097|gb|ABX26771.1| Glutamine ABC transporter permease [Lactobacillus helveticus DPC
           4571]
          Length = 213

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG+  +L           K GK +  +YI+ F    +P LV++ + Y L   + +
Sbjct: 28  IFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VR+G+ ++  GQME A + G+T+ +A
Sbjct: 80  VKLSGFQAGT----------IGLTLYTSAFIAETVRAGISSIGTGQMEGARSNGMTYTQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQAM+ +IPPL +Q++NL+KNSS LA   GF DL+     I   T + I+  ++
Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYVV 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL L++ ++ +M  L  K+A
Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           + L GF NT   +   +I + I+G       ++  K    + +VY+ +FRNIP LV++  
Sbjct: 11  SFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIVMI 70

Query: 148 LY 149
            Y
Sbjct: 71  FY 72


>gi|229042503|ref|ZP_04190248.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH676]
 gi|296501401|ref|YP_003663101.1| glutamine transport system permease GlnP [Bacillus thuringiensis
           BMB171]
 gi|228726856|gb|EEL78068.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH676]
 gi|296322453|gb|ADH05381.1| glutamine transport system permease protein glnP [Bacillus
           thuringiensis BMB171]
          Length = 218

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|257866173|ref|ZP_05645826.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872504|ref|ZP_05652157.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257875808|ref|ZP_05655461.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|325570408|ref|ZP_08146185.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|257800107|gb|EEV29159.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806668|gb|EEV35490.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257809974|gb|EEV38794.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|325156618|gb|EGC68795.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 215

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 82/126 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE +RSG+  VP+GQMEA+++ G T+ +A R ++LPQA + ++PPL +Q
Sbjct: 90  IGLTIYTSAFIAETIRSGIQTVPKGQMEASLSSGFTYSQAMRYIILPQAFKIVVPPLGNQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+KNSS+   V   D++  G  I ++T    +  +I    YL +++ ++  M  L  
Sbjct: 150 FINLVKNSSILAMVAGLDIMYQGDLIASETFNTFDTYIIVGLFYLIITLPLSYLMVYLER 209

Query: 391 KIALKE 396
           + A++ 
Sbjct: 210 RWAVRS 215



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    + GF  T   +   +  + +IGTL+   +LS N+L+  I + YVE FRNIP L
Sbjct: 6   QTYTGQFIEGFKYTVMASLIALFFSLLIGTLMAIFQLSDNRLIKGIAKAYVEFFRNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|123444360|ref|YP_001008325.1| ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122091321|emb|CAL14207.1| ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 245

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 69/96 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+CY+ AFIAE +RSG+  V +GQ  AA ALGLT  +A R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTCYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ +T++G L+ A R S  K + W    Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFSIGYSTLFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLP 157
               LP
Sbjct: 82  ASQFLP 87


>gi|313123230|ref|YP_004033489.1| glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312279793|gb|ADQ60512.1| Glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|325684594|gb|EGD26753.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 213

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS Y++AFIAE VRSG+ +V  GQME A + G+T+ +A R V+LPQA R +IPPL +Q
Sbjct: 91  IGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIPPLGNQ 150

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  + + T Q I   ++    YL+L++ ++ +M  L 
Sbjct: 151 FVNLIKNSSILAFVAGF-DLMYQGDIVASNTFQTIPSYVLVSLFYLALTLPLSYYMQYLE 209

Query: 390 AK 391
            K
Sbjct: 210 KK 211



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 32/63 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           +  L+GF NT   +   +  + IIG+         NK    + +VYVE+FRNIP LVV  
Sbjct: 10  STFLLGFWNTILCSLISLFFSLIIGSGFAILETVPNKFWRAVAKVYVEIFRNIPLLVVTM 69

Query: 147 FLY 149
             Y
Sbjct: 70  VFY 72


>gi|15597399|ref|NP_250893.1| amino acid permease [Pseudomonas aeruginosa PAO1]
 gi|107101630|ref|ZP_01365548.1| hypothetical protein PaerPA_01002674 [Pseudomonas aeruginosa PACS2]
 gi|116050136|ref|YP_791047.1| putative amino acid permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891844|ref|YP_002440711.1| putative amino acid permease [Pseudomonas aeruginosa LESB58]
 gi|254235229|ref|ZP_04928552.1| hypothetical protein PACG_01120 [Pseudomonas aeruginosa C3719]
 gi|254240625|ref|ZP_04933947.1| hypothetical protein PA2G_01284 [Pseudomonas aeruginosa 2192]
 gi|313110963|ref|ZP_07796803.1| putative amino acid permease [Pseudomonas aeruginosa 39016]
 gi|9948225|gb|AAG05591.1|AE004646_12 probable amino acid permease [Pseudomonas aeruginosa PAO1]
 gi|115585357|gb|ABJ11372.1| putative amino acid permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167160|gb|EAZ52671.1| hypothetical protein PACG_01120 [Pseudomonas aeruginosa C3719]
 gi|126194003|gb|EAZ58066.1| hypothetical protein PA2G_01284 [Pseudomonas aeruginosa 2192]
 gi|218772070|emb|CAW27849.1| probable amino acid permease [Pseudomonas aeruginosa LESB58]
 gi|310883305|gb|EFQ41899.1| putative amino acid permease [Pseudomonas aeruginosa 39016]
          Length = 238

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 10/172 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    F  FG+P L+  AL   L+   + P+L   +F        EF++    L+ YT
Sbjct: 65  PLLVQLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAGAWGLTLYT 116

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +AF+AE  R+G+ +V   Q  A +ALGLT R+  R+V+LPQA+R+ +PPL  QY+N LKN
Sbjct: 117 SAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKN 176

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           SSLA+A+G A+L      +  +T +  +   I   +Y+    +I  F   L 
Sbjct: 177 SSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQ 228



 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           IG  +   RLS  +L++W  R Y+ +FRN P LV +FF Y  V ++LP
Sbjct: 35  IGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLP 82


>gi|318608045|emb|CBY29543.1| amino acid ABC transporter, permease protein [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 245

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 69/96 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+CY+ AFIAE +RSG+  V +GQ  AA ALGLT  +A R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTCYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ +T++G L+ A R S  K + W    Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLP 157
               LP
Sbjct: 82  ASQFLP 87


>gi|94309636|ref|YP_582846.1| amino acid ABC transporter permease [Cupriavidus metallidurans
           CH34]
 gi|93353488|gb|ABF07577.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 231

 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 97/168 (57%), Gaps = 15/168 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL    F  FG P L+  A+K  L+       + N+        E +S  IAL  Y
Sbjct: 66  RNVPLLAHMLFWYFGAPQLLPFAIKSWLY-------EHNY--------EAVSALIALVLY 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A++AE +RSG+ ++P+ Q+EA+ ALG +   + RLV+LPQ++R  +PPL +Q LNL K
Sbjct: 111 TTAYMAEDIRSGIRSIPKEQLEASRALGFSFLASMRLVVLPQSLRITVPPLVNQILNLWK 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           NSS+A+ +G A+L+     + + T +  E        YL++S+ I LF
Sbjct: 171 NSSIAMVIGVAELMYQAQQVESATFRGFESFAFATLAYLTISMTITLF 218


>gi|260893885|ref|YP_003239982.1| polar amino acid ABC transporter, inner membrane subunit [Ammonifex
           degensii KC4]
 gi|260866026|gb|ACX53132.1| polar amino acid ABC transporter, inner membrane subunit [Ammonifex
           degensii KC4]
          Length = 233

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 82/122 (67%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  + A++AEI R+G+ ++P+GQMEAA +LG+T+R+A R V+LPQA R+IIPPL ++++ 
Sbjct: 111 SLNSGAYVAEIFRAGIQSIPKGQMEAARSLGMTYRQAMRYVILPQAFRNIIPPLGNEFIA 170

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +LK++SL   +G  +L   G  II  T +  EI L    IYL L++ I+  ++    ++ 
Sbjct: 171 MLKDTSLLSVIGIVELTRRGQIIIASTFRPFEIWLTVALIYLILTLSISRLVDYWEKRLR 230

Query: 394 LK 395
           ++
Sbjct: 231 VR 232



 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G V T  +    +    + G +VG GRLS N+++ ++   YV+  R  P LV IF +
Sbjct: 11  LLLGAVETLKITCLAVSLGCVFGLIVGLGRLSRNRVIRFLSTCYVDFLRGTPLLVQIFIV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y  +  +L    + +V  +G+
Sbjct: 71  YFGLPQLLEQLQNFLVESWGL 91


>gi|332163539|ref|YP_004300116.1| ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667769|gb|ADZ44413.1| ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 245

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 69/96 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+CY+ AFIAE +RSG+  V +GQ  AA ALGLT  +A R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTCYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ +T++G L+ A R S  K + W    Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLP 157
               LP
Sbjct: 82  ASQFLP 87


>gi|49082028|gb|AAT50414.1| PA2203 [synthetic construct]
          Length = 239

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 10/172 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    F  FG+P L+  AL   L+   + P+L   +F        EF++    L+ YT
Sbjct: 65  PLLVQLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAGAWGLTLYT 116

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +AF+AE  R+G+ +V   Q  A +ALGLT R+  R+V+LPQA+R+ +PPL  QY+N LKN
Sbjct: 117 SAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKN 176

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           SSLA+A+G A+L      +  +T +  +   I   +Y+    +I  F   L 
Sbjct: 177 SSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQ 228



 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           IG  +   RLS  +L++W  R Y+ +FRN P LV +FF Y  V ++LP
Sbjct: 35  IGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLP 82


>gi|46579380|ref|YP_010188.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603064|ref|YP_967464.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris DP4]
 gi|46448794|gb|AAS95447.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563293|gb|ABM29037.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311233203|gb|ADP86057.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 337

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 120/209 (57%), Gaps = 15/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ + + ++GIVL +  T L+R       + L + YI   +I G P LV + L Y     
Sbjct: 136 EVSMLAIIIGIVLGV-VTGLARISVNPALRWLAITYIE--IIRGSPLLVQVFLWYF---- 188

Query: 248 KPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
             V+G      F  +G S + P +  + +AL+ +T A++AEIVR+G+ +V RGQMEAA +
Sbjct: 189 --VVGTLLNALFEKVGLSAIPPLWYGV-MALAIFTGAYVAEIVRAGIQSVHRGQMEAARS 245

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+++ ++ R V+LPQA R I+PPL  Q+++L+K+SSL   +   +L      ++  + Q
Sbjct: 246 LGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATREVVTTSLQ 305

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             E+ ++   +YL L+  ++L +  L  +
Sbjct: 306 PFELWIVCALLYLVLTFTLSLCVQYLERR 334


>gi|323467039|gb|ADX70726.1| Glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus H10]
          Length = 213

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 115/204 (56%), Gaps = 20/204 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG+  +L           K GK +  +YI+ F    +P LV++ + Y L   + +
Sbjct: 28  IFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIFR--NIPLLVIVMIFY-LIVPRYI 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VR+G+ ++  GQME A + G+T+ +A
Sbjct: 80  VKLSGFQAGT----------IGLTLYTSAFIAETVRAGINSIGTGQMEGARSNGMTYTQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQAM+ +IPPL +Q++NL+KNSS LA   GF DL+     I   T + I+  ++
Sbjct: 130 MRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYVV 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL L++ ++ +M  L  K+A
Sbjct: 189 VGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           + L GF NT   +   +I + I+G       ++  K    + +VY+ +FRNIP LV++  
Sbjct: 11  SFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIVMI 70

Query: 148 LY 149
            Y
Sbjct: 71  FY 72


>gi|56420513|ref|YP_147831.1| glutamine ABC transporter permease [Geobacillus kaustophilus
           HTA426]
 gi|261420186|ref|YP_003253868.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|297529845|ref|YP_003671120.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. C56-T3]
 gi|319766998|ref|YP_004132499.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. Y412MC52]
 gi|56380355|dbj|BAD76263.1| glutamine ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
 gi|261376643|gb|ACX79386.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|297253097|gb|ADI26543.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. C56-T3]
 gi|317111864|gb|ADU94356.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC52]
          Length = 217

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 84/128 (65%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  + L  YTAAFIAE +RSG+ AVP+GQMEAA + GLT+ +A R V+LPQA++ +I
Sbjct: 86  SFTAGTLGLMVYTAAFIAEAIRSGIQAVPKGQMEAARSSGLTYLQAMRYVILPQAVKIVI 145

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++NL+KNSS+   +   DL+  G  I ++T    ++ +     YL L+I ++L 
Sbjct: 146 PPLGNQFINLVKNSSVLGVIAGLDLMYYGDLISSKTFVTFDVYIFVALFYLVLTIPLSLG 205

Query: 385 MNRLNAKI 392
           +  L  ++
Sbjct: 206 VGYLERRL 213


>gi|317491136|ref|ZP_07949572.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920683|gb|EFV42006.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 246

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VRSG+ ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FVSSMLCLGLFTAARVCEQVRSGIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           + +  KI L
Sbjct: 231 HFVERKIQL 239



 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A  +G++ G  R   N+ ++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSICAWIIAFFVGSIFGILRTVPNRFLSTIGMCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  +  +LP          GM+  +         +D N + FV S    + L
Sbjct: 77  LIVQFFTWYLVIPELLPA-------DLGMWFKSE--------LDPNVQFFVSSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|294497133|ref|YP_003560833.1| glutamine ABC transporter permease GlnM [Bacillus megaterium QM
           B1551]
 gi|294347070|gb|ADE67399.1| glutamine ABC transporter, permease protein GlnM [Bacillus
           megaterium QM B1551]
          Length = 212

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 12/129 (9%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YTAAFIAE +R+G++AVP+GQ+EAA + GLT+ +A R ++LPQA++ +IPPL +Q
Sbjct: 87  LGLTIYTAAFIAEAIRAGIMAVPKGQLEAARSSGLTYGQAMRFIILPQAIKIVIPPLGNQ 146

Query: 331 YLNLLKNSS-LAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           ++NL+KNSS L +  GF     ADLVS      +QT    ++ +     YL L+I ++L 
Sbjct: 147 FINLVKNSSVLGIVAGFDLMYQADLVS------SQTYVVFDVYIFVALFYLVLTIPLSLG 200

Query: 385 MNRLNAKIA 393
           +  L  ++ 
Sbjct: 201 VGYLEKRLG 209


>gi|270292808|ref|ZP_06199019.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M143]
 gi|270278787|gb|EFA24633.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M143]
          Length = 482

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 290 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 339

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 340 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 392

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 393 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 452

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 453 FKMYAILAIFYLVIITLLTRLAKRLEKRI 481


>gi|309800525|ref|ZP_07694677.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
 gi|308115873|gb|EFO53397.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
          Length = 313

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 121 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGVP---------- 170

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS  +AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 171 -NFIESLTGQQSPIN------DFVAGTIALSLNSAAYIAEIVRGGIKAVPIGQMEASRSL 223

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 224 GISYSKTMRKIVLPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 283

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 284 FKMYAILAVFYLVIITLLTRLAKRLEKRI 312


>gi|331005159|ref|ZP_08328559.1| polar amino acid ABC transporter, inner membrane subunit [gamma
           proteobacterium IMCC1989]
 gi|330421039|gb|EGG95305.1| polar amino acid ABC transporter, inner membrane subunit [gamma
           proteobacterium IMCC1989]
          Length = 315

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 21/200 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ ++G+V+ +  T        K   A+ L  +   +I G P LV I +          
Sbjct: 128 IFAIIIGLVVGILRT-------TKNVIAMNLTTVYIEIIRGTPLLVQIFI---------- 170

Query: 251 LGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              F F  G+ +  + M+  IA LS ++ A+IAEIVRSG+ ++P+GQ E A +LGL++ +
Sbjct: 171 ---FYFFIGTVLDLDRMTAGIAALSIFSGAYIAEIVRSGIQSIPQGQTEGAKSLGLSYLQ 227

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA+R  +PP+  Q++NL+K+SSL   +   DL   G  + + T    E+   
Sbjct: 228 TMRLVILPQAIRKTLPPMVGQFINLVKDSSLVSVIAITDLTKAGREVASATFSPFEVWFT 287

Query: 370 WMFIYLSLSIMIALFMNRLN 389
               YL L+ +++  + R  
Sbjct: 288 IALCYLLLTGILSFALQRFE 307



 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 38/67 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T +++F  +I A IIG +VG  R + N +   +  VY+E+ R  P LV IF  Y  
Sbjct: 115 GMMMTIYISFFSLIFAIIIGLVVGILRTTKNVIAMNLTTVYIEIIRGTPLLVQIFIFYFF 174

Query: 152 VLSVLPI 158
           + +VL +
Sbjct: 175 IGTVLDL 181


>gi|217958227|ref|YP_002336773.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|228983842|ref|ZP_04144037.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229137441|ref|ZP_04266052.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
 gi|229154343|ref|ZP_04282463.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 4342]
 gi|217065677|gb|ACJ79927.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|228629167|gb|EEK85874.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 4342]
 gi|228645999|gb|EEL02222.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
 gi|228775891|gb|EEM24262.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 218

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVVGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|292669477|ref|ZP_06602903.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas noxia ATCC 43541]
 gi|292648930|gb|EFF66902.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas noxia ATCC 43541]
          Length = 223

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 15/222 (6%)

Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP L +      +I V S  +G V+ L    ++R  H +  + L  +Y+  F   G P 
Sbjct: 15  SFPLLLVGAGVTIQITVLSTAIGFVIGLIVG-VARISHVRLLRMLAEVYVEFFR--GTPL 71

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y   F  PVL       G  + P F++   A    + A++AEI R+G+ +V  
Sbjct: 72  LVQIFLFY---FALPVLT------GQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDD 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA  +LG+T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G 
Sbjct: 122 GQMEAGRSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            II +T  + EI +    IYL +++ I+ F+  L  +  + +
Sbjct: 182 LIIAKTYGSFEIWMSVAVIYLVMTLTISRFVAYLERRYRVND 223



 Score = 39.7 bits (91), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           +IG +VG  R+S  +L+  +  VYVE FR  P LV IF  Y +    LP+     + PF
Sbjct: 39  VIGLIVGVARISHVRLLRMLAEVYVEFFRGTPLLVQIFLFYFA----LPVLTGQRIDPF 93


>gi|322389670|ref|ZP_08063218.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321143669|gb|EFX39099.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 727

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  +F+       R +        + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 535 FAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFIFWGIPNLIESVTGHQ 594

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P+    +F+ G+          IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 595 ----SPI---NDFVAGT----------IALSLNAAAYIAEIVRGGIQAVPIGQMEASRSL 637

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 638 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 697

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++  F  +L  K+
Sbjct: 698 FKMYAILAVFYLVIITLLTRFAKKLEKKV 726


>gi|163800524|ref|ZP_02194425.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175967|gb|EDP60761.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 265

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 126/241 (52%), Gaps = 19/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G + +   +S   +T+  +A   +F+  +G+V +L   RLS   H K G 
Sbjct: 43  VPDYIAFYEDGEWWSAELISGLMVTLKISAISLIFTLAIGLVTALL--RLS---HSKVGN 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+ + Y+   +I   P LV I L Y +    PV+G             F S  +ALS + 
Sbjct: 98  AIGVTYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSSAVLALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R+GL ++ +GQ EAA +LGL+   A + V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEIFRAGLSSIAKGQFEAAKSLGLSPFFAYKDVILPQVLQRTLPPLTNEVVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SS+   +   DL +    I+++T    EI      IYL+L++ ++     L  K+    +
Sbjct: 204 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLALTLTLSGLSAWLEHKLGASWR 263

Query: 398 K 398
           K
Sbjct: 264 K 264


>gi|320547054|ref|ZP_08041352.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448291|gb|EFW89036.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 733

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 111/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+  + A   ++     +       + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 541 FAIAMIIGIIFGMMAVAPNKVLRTISAIFVDVVRGIPLMIVAAFIFWGIPNLIESMTGHQ 600

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P+              +F++  IALS    A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 601 ----SPI-------------NDFLAATIALSLNAGAYIAEIVRGGIEAVPKGQMEASRSL 643

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 644 GISYGKTMQKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 703

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   IYL +  ++     RL  ++
Sbjct: 704 FRMYAILAVIYLVMITLLTRLAKRLEKRL 732


>gi|218234515|ref|YP_002365437.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|229148979|ref|ZP_04277224.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1550]
 gi|218162472|gb|ACK62464.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|228634519|gb|EEK91103.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1550]
          Length = 218

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+            L+ YTAAFIAE++R+G+++V
Sbjct: 66  LVLIAFIF--YFALPVVGITLNGFVAGTA----------TLTVYTAAFIAEVIRAGILSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 114 AKGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 173

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 174 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 216


>gi|296876379|ref|ZP_06900431.1| arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Streptococcus parasanguinis ATCC 15912]
 gi|296432669|gb|EFH18464.1| arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Streptococcus parasanguinis ATCC 15912]
          Length = 754

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  +F+       R +        + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 562 FAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFIFWGIPNLIESVTGHQ 621

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P+    +F+ G+          IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 622 ----SPI---NDFVAGT----------IALSLNAAAYIAEIVRGGIQAVPIGQMEASRSL 664

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 665 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 724

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++  F  +L  K+
Sbjct: 725 FKMYAILAVFYLVIITLLTRFAKKLEKKV 753


>gi|329770427|ref|ZP_08261809.1| hypothetical protein HMPREF0433_01573 [Gemella sanguinis M325]
 gi|328836550|gb|EGF86210.1| hypothetical protein HMPREF0433_01573 [Gemella sanguinis M325]
          Length = 213

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 110/184 (59%), Gaps = 11/184 (5%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSL 269
           G  + L  IST+ +F +   + +    ++  + P+L Q   I       G + +P FMS 
Sbjct: 34  GIVVCLAKISTYRVFNIIATIYV----EIIRNTPILVQIMIIYFALPEVGISFTP-FMSA 88

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  + A+++EI RSG++A+ +GQMEA  +LGL++ +  +L++LPQA+++ +P L +
Sbjct: 89  IIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPSLGN 148

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++L+K SS+   VG AD++    T+ N T Q     L+   IY  ++ +++L + RL 
Sbjct: 149 EFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIYFVITSILSLLVKRLE 208

Query: 390 AKIA 393
            K+A
Sbjct: 209 KKLA 212


>gi|225870779|ref|YP_002746726.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
 gi|225700183|emb|CAW94346.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus equi subsp. equi
           4047]
          Length = 721

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GIV  + A   S++    +       + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 529 FAIALVIGIVFGMMAVSPSKNLRMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 588

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 589 -------------------SPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 629

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL++    R ++LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 630 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 689

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 690 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 720


>gi|229541937|ref|ZP_04430997.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229326357|gb|EEN92032.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 217

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 87/129 (67%), Gaps = 2/129 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS YTAAFIAE VR+G+ +V +GQ+EAA + GLT+ +A R V+LPQA++ +IP
Sbjct: 87  FIAGTIALSIYTAAFIAEAVRAGIQSVDKGQLEAARSTGLTYTQAMRYVVLPQAIKIVIP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILIWMFIYLSLSIMIALF 384
           P+ +Q+LNL+KNSS+       DL+     I  +T    +  I + MF YL L+I ++L 
Sbjct: 147 PIGNQFLNLVKNSSILGVFAGLDLMYYADLIHEKTWITFDTYIFVGMF-YLILTIPLSLL 205

Query: 385 MNRLNAKIA 393
           +N L  ++A
Sbjct: 206 VNYLERRLA 214



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 39/61 (63%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GFVNT  ++  G++ + I+G L+   RL+  KL+ +I  VYVEV RNIP ++  FF Y  
Sbjct: 17  GFVNTIKISIIGLVASFILGNLIAVFRLAPVKLLNFIGAVYVEVIRNIPLILTGFFFYNG 76

Query: 152 V 152
           +
Sbjct: 77  L 77


>gi|134299235|ref|YP_001112731.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum reducens MI-1]
 gi|134051935|gb|ABO49906.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 223

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 105/172 (61%), Gaps = 13/172 (7%)

Query: 226 TFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T++I G+P L+ L+ L Y L F    L +F      TV+       I +S    A+IAEI
Sbjct: 62  TWVIRGVPLLLQLMFLYYGLPFMGLTLNEF------TVA------VIGMSVCGGAYIAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ ++ +GQMEAA+++G+T+ +A R V+LPQA + ++PP+ ++++ L+K+S+L   +
Sbjct: 110 MRAGIQSIDKGQMEAALSMGMTYPQAMRRVILPQAYKRLLPPMGNEFITLMKDSALVSVI 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+     + N T + IEI ++   +YL ++    + +NRL  K+A+ E
Sbjct: 170 CMTELLRAANLLQNATFRPIEIYVVAGLLYLIMTTFFTMVVNRLEKKLAVSE 221



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G V T  L F  +   T+IG LV   ++S+ K++ W   +Y  V R +P L+ + FL
Sbjct: 18  LLLGAVMTIKLTFFAITFGTLIGLLVALAKISSFKILRWFGGLYTWVIRGVPLLLQLMFL 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|47568092|ref|ZP_00238797.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
 gi|47555246|gb|EAL13592.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
          Length = 177

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 104/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTAAFIAE++R+G+++V
Sbjct: 25  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTAAFIAEVIRAGILSV 72

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 73  AKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQ 132

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L+I +++ +  L  ++A KE
Sbjct: 133 GDLISTKTFVTFDVYIFVGMF-YLILTIPLSMLVRYLEKRLA-KE 175


>gi|195978381|ref|YP_002123625.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein GlnP [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975086|gb|ACG62612.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein GlnP [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 713

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 110/211 (52%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GIV  + A   S++    +       + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 521 FAIALVIGIVFGMMAVSPSKNLRMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 580

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 581 -------------------SPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 621

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL++    R ++LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 622 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 681

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 682 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 712


>gi|312876441|ref|ZP_07736425.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796799|gb|EFR13144.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 220

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 32/226 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232
           +T++  A       V G+V +LF  R+S+         F+    +  PLL    F+ +GL
Sbjct: 19  VTIELTAIAVTIGLVFGLVAALF--RISKIKVLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V            P L            P F++  IAL   + A+ AEI+R+ ++++
Sbjct: 77  PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+  
Sbjct: 115 DRGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +QTG+  EI +  + IYL+L+ + +   N L  ++   E++
Sbjct: 175 AQLKASQTGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220


>gi|315613252|ref|ZP_07888162.1| glutamine ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus sanguinis ATCC
           49296]
 gi|315314814|gb|EFU62856.1| glutamine ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus sanguinis ATCC
           49296]
          Length = 721

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|306829599|ref|ZP_07462789.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus mitis
           ATCC 6249]
 gi|304428685|gb|EFM31775.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus mitis
           ATCC 6249]
          Length = 721

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|293365541|ref|ZP_06612250.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307703498|ref|ZP_07640440.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|291315909|gb|EFE56353.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307622905|gb|EFO01900.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 721

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|322375331|ref|ZP_08049844.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C300]
 gi|321279594|gb|EFX56634.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C300]
          Length = 721

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|157146735|ref|YP_001454054.1| hypothetical protein CKO_02509 [Citrobacter koseri ATCC BAA-895]
 gi|157083940|gb|ABV13618.1| hypothetical protein CKO_02509 [Citrobacter koseri ATCC BAA-895]
          Length = 246

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           N +  K+ L
Sbjct: 231 NLVERKVRL 239



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ +  I A ++G+L G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSGMGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP               N G+ F    +D N + F+ S    I L
Sbjct: 77  LIVQFFTWYLVVPELLP--------------ENIGMWFKA-ELDPNIQFFLSSM---ICL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|225181291|ref|ZP_03734736.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
 gi|225168071|gb|EEG76877.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
          Length = 220

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 120/225 (53%), Gaps = 25/225 (11%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGL 232
           L    LT+  +A   +  F++G V+ L           K     PL +++T    +I G 
Sbjct: 17  LQGAVLTVQISAVAVLVGFLIGSVVGLV----------KLSSIRPLRFLATAYIEIIRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LV I L Y           F     + VS   F +  IALS  + A++ EIVRSG+ +
Sbjct: 67  PLLVQIVLIY-----------FGLASLNIVSLDRFTAGVIALSINSGAYVGEIVRSGIQS 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQMEAA +LG+ + ++ R ++LPQA R IIPPL ++++ L+K+SSL  A+GFA+L+ 
Sbjct: 116 IDKGQMEAARSLGMNYVRSMRFIILPQAFRRIIPPLVNEFIMLIKDSSLLFAIGFAELMQ 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            G  I  +T +  E+ +    +Y  ++ +++   + +  +  +++
Sbjct: 176 RGNAIRARTYKDFEVFIGIAAVYFVMTFILSRVASYVERRTRIRD 220


>gi|331266285|ref|YP_004325915.1| polar amino acid ABC transporter, amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
 gi|326682957|emb|CBZ00574.1| polar amino acid ABC transporter, amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
          Length = 721

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|212711637|ref|ZP_03319765.1| hypothetical protein PROVALCAL_02712 [Providencia alcalifaciens DSM
           30120]
 gi|212685739|gb|EEB45267.1| hypothetical protein PROVALCAL_02712 [Providencia alcalifaciens DSM
           30120]
          Length = 262

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 72/98 (73%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ L+ YT  FIAE VRSG+  V +GQ +AA+ALGLT  ++ RLV+LPQA++  +
Sbjct: 130 EFLAGFVGLTLYTVPFIAEEVRSGIRGVRQGQKQAALALGLTSWQSMRLVILPQAVKIAL 189

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PPL  QY+N++KNSSL +A+G A+L  V   + +Q+ Q
Sbjct: 190 PPLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQSLQ 227



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 20/180 (11%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   +I AT++G +V + R S    + W   VY+ +FRN P LV +FF Y +
Sbjct: 39  GFLLTVWISICTIIAATLLGFIVASARDSQIAPLRWFVSVYISIFRNTPLLVQLFFWYFA 98

Query: 152 VLSVLPIP-------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
              +LP          H + + FG+ L     SF  L       ++   F+   V S   
Sbjct: 99  SGEILPAAAMEWLNTPHEVDI-FGLTLGWP--SFEFLAGFVGLTLYTVPFIAEEVRS--G 153

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVS 263
            R  R   ++   AL L    +  +  LP  V IAL        P+LGQ+ N +  S+++
Sbjct: 154 IRGVRQGQKQAALALGLTSWQSMRLVILPQAVKIAL-------PPLLGQYMNVVKNSSLT 206


>gi|218886439|ref|YP_002435760.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757393|gb|ACL08292.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 337

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 87/137 (63%), Gaps = 1/137 (0%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +G   +SP +  + +AL+ +T A++AEIVR+G+ +V RGQMEAA +LG+ + +A R V
Sbjct: 199 EHVGLGGISPLWYGV-MALALFTGAYVAEIVRAGIQSVHRGQMEAARSLGMNYAQAMRKV 257

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R I+PPL  Q+++L+K+SSL   +   +L      ++  + Q  E+ ++   +Y
Sbjct: 258 ILPQAFRRIMPPLAGQFISLIKDSSLLGVIAIRELTKATREVVTTSLQPFELWIVCAVLY 317

Query: 375 LSLSIMIALFMNRLNAK 391
           L L+  ++LF+  L  +
Sbjct: 318 LVLTFTLSLFVQYLERR 334


>gi|315178664|gb|ADT85578.1| ABC-type amino acid transport system permease component [Vibrio
           furnissii NCTC 11218]
          Length = 245

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 102/191 (53%), Gaps = 23/191 (12%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R +   + +  +A+PLL +  ++ +GLP L  ++L    HF   V+              
Sbjct: 78  RQANRVYVEVVRAIPLLVLLLWIYYGLPVLFDLSLN---HFTAGVM-------------- 120

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                 ALS   +AF+AE+ R G+ A+ RGQ EAA ALGL   +  RLV+LPQA+R I+P
Sbjct: 121 ------ALSLAESAFMAEVFRGGIQAIDRGQHEAAQALGLRDWQKMRLVILPQALRHILP 174

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++ +LK SSL   +G +DL      ++      +EI    +  YL L ++++  +
Sbjct: 175 PLGNQFIYILKMSSLVSVIGLSDLTRRANELVVTEYLPLEIYTFLVLEYLILILLVSYGV 234

Query: 386 NRLNAKIALKE 396
            RL  K+AL +
Sbjct: 235 RRLEKKLALPQ 245



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 78  PYTSDS-SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           P+T+      T ++ GF +T  L+   M+ A  +G +V    LS  + +    RVYVEV 
Sbjct: 29  PFTAQGVRNLTFLIAGFGDTLSLSLLSMVLAMGLGLMVALPALSPRRTLRQANRVYVEVV 88

Query: 137 RNIPPLVVIFFLY 149
           R IP LV++ ++Y
Sbjct: 89  RAIPLLVLLLWIY 101


>gi|251796880|ref|YP_003011611.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247544506|gb|ACT01525.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 217

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 117/204 (57%), Gaps = 24/204 (11%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG ++++F  R+S           PL +I T  +  +  + L+ + +  ++  P LG
Sbjct: 32  SFALGTIIAVF--RIS--------SVKPLRWIGTAYVEFVRNIPLLLVVFVFYYGLPSLG 81

Query: 253 QF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                FI G+          + L+ YTA+F+AE +R+G++++P GQ EAA A GLT+ + 
Sbjct: 82  VTLSGFICGT----------VGLTVYTASFVAEAIRAGIMSIPTGQTEAARASGLTYTQT 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            R V+LPQA++ +IPPL++Q++NL+KNSS L V  GF DL+  G  + ++T    +  + 
Sbjct: 132 MRHVVLPQAVKIVIPPLSNQFINLVKNSSILGVFAGF-DLMYYGDQVASKTYATFDTYIF 190

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              +YL L+I ++    +L  ++A
Sbjct: 191 VAALYLVLTIPLSFAALKLERRLA 214



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GFVNT W +   ++ +  +GT++   R+S+ K + WI   YVE  RNIP L+V+F  Y
Sbjct: 17  GFVNTIWSSVVALLGSFALGTIIAVFRISSVKPLRWIGTAYVEFVRNIPLLLVVFVFY 74


>gi|168484864|ref|ZP_02709809.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|172041971|gb|EDT50017.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
          Length = 721

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+    + F   +       + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSFRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|322387683|ref|ZP_08061292.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus infantis ATCC 700779]
 gi|321141550|gb|EFX37046.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus infantis ATCC 700779]
          Length = 481

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 113/209 (54%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 289 FAIAIVIGIIFGMFSVSPYKPLRLIAEIFVDVIRGIPLMILAAFIFWGIP---------- 338

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS  +AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 339 -NFIESLTGQQSPIN------DFVAGTIALSLNSAAYIAEIVRGGIKAVPVGQMEASRSL 391

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 392 GISYGKTMRKIVLPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 451

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 452 FKMYAILAVFYLVIITLLTRLAKRLEKRI 480


>gi|49082008|gb|AAT50404.1| PA4194 [synthetic construct]
          Length = 233

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 78/117 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  S  +AL+ YTAAF++E +RSG+ AVP  Q+EAA ALG  +  + RLV+LPQA+R  +
Sbjct: 99  EAASAIVALTLYTAAFMSEDMRSGIRAVPTVQLEAARALGFGYLASMRLVILPQALRITV 158

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           PPL SQ LNL KN+S+A  +G A+L+   G + + T ++ E        YLS+S++I
Sbjct: 159 PPLISQTLNLWKNTSIATVIGVAELMYQAGQVESSTFRSFESFAFATAAYLSVSLLI 215


>gi|15599389|ref|NP_252883.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107103711|ref|ZP_01367629.1| hypothetical protein PaerPA_01004782 [Pseudomonas aeruginosa PACS2]
 gi|218889477|ref|YP_002438341.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254237069|ref|ZP_04930392.1| hypothetical protein PACG_03106 [Pseudomonas aeruginosa C3719]
 gi|254242876|ref|ZP_04936198.1| hypothetical protein PA2G_03645 [Pseudomonas aeruginosa 2192]
 gi|9950404|gb|AAG07581.1|AE004835_10 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126169000|gb|EAZ54511.1| hypothetical protein PACG_03106 [Pseudomonas aeruginosa C3719]
 gi|126196254|gb|EAZ60317.1| hypothetical protein PA2G_03645 [Pseudomonas aeruginosa 2192]
 gi|218769700|emb|CAW25460.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 232

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 78/117 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  S  +AL+ YTAAF++E +RSG+ AVP  Q+EAA ALG  +  + RLV+LPQA+R  +
Sbjct: 99  EAASAIVALTLYTAAFMSEDMRSGIRAVPTVQLEAARALGFGYLASMRLVILPQALRITV 158

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           PPL SQ LNL KN+S+A  +G A+L+   G + + T ++ E        YLS+S++I
Sbjct: 159 PPLISQTLNLWKNTSIATVIGVAELMYQAGQVESSTFRSFESFAFATAAYLSVSLLI 215


>gi|229056416|ref|ZP_04195829.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
 gi|228720890|gb|EEL72439.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
          Length = 206

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 104/165 (63%), Gaps = 17/165 (10%)

Query: 235 LVLIALKYQLHFDKPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LVLIA  +  +F  PV+G   N F+ G+          + L+ YTA+FIAE++R+G+++V
Sbjct: 54  LVLIAFIF--YFALPVIGITLNGFVAGT----------VTLTVYTASFIAEVIRAGILSV 101

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +    V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  
Sbjct: 102 AKGQMEAARSSGLTYVQGMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQ 161

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T    ++ I + MF YL L++ +++ +  L  ++A KE
Sbjct: 162 GDLISTKTLVTFDVYIFVGMF-YLILTLPLSMLVRYLEKRLA-KE 204


>gi|209516855|ref|ZP_03265705.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502671|gb|EEA02677.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 242

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 81/143 (56%), Gaps = 6/143 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYT 277
           PLL    F  FG  TL+       L+   PV    +  G +   P  EF++ ++ L+CY+
Sbjct: 64  PLLVQLLFWYFGAATLLPQPWMEWLNASHPV----SLWGCTIAWPSFEFVAGWVGLTCYS 119

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AFI E  R+G+  V   Q +AA ALGLT   A R V+LPQA+R   PPL  QY+NL+KN
Sbjct: 120 TAFIGEEFRAGMRGVKETQHQAAAALGLTPLAAFRYVILPQAIRIATPPLAGQYMNLVKN 179

Query: 338 SSLAVAVGFADLVSVGGTIINQT 360
           SSLA+ +G A+L  V   +  +T
Sbjct: 180 SSLAMTIGLAELSYVSRQVDTET 202


>gi|238759569|ref|ZP_04620731.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia aldovae ATCC 35236]
 gi|238702228|gb|EEP94783.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia aldovae ATCC 35236]
          Length = 245

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 69/96 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+CY+ AFIAE +R+G+  V +GQ  AA ALGLT  +A R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTCYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 38/66 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ +T++G L+ A R S    + W+   Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWISACTVVASTLLGFLLAAARDSELNGLQWLAIGYSTLFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLP 157
              +LP
Sbjct: 82  ASQLLP 87


>gi|307708790|ref|ZP_07645252.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
 gi|307615156|gb|EFN94367.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
          Length = 275

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 83  FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 132

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 133 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 185

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 186 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 245

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 246 FKMYAILAIFYLVIITLLTRLAKRLEKRI 274


>gi|237730632|ref|ZP_04561113.1| glutamate/aspartate transport system permease [Citrobacter sp.
           30_2]
 gi|226906171|gb|EEH92089.1| glutamate/aspartate transport system permease [Citrobacter sp.
           30_2]
          Length = 246

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           N +  KI L
Sbjct: 231 NLVERKIRL 239



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ +  I A +IG+L G  R   N+ ++ I  +YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSGIGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|54302942|ref|YP_132935.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
 gi|46916370|emb|CAG23135.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 276

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 120/235 (51%), Gaps = 26/235 (11%)

Query: 165 LPFGMFLNNRGLSFPT-------LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +P  ++  + G  FP        +T+  +A   +F+ ++G+V +L   RLS       G+
Sbjct: 56  IPQYLWFIDDGEWFPAELLEGLFVTLKISAVSLIFTLLIGLVTALL--RLSDSI---VGR 110

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            L   YI   LI   P LV I L Y +    PVLG             F +  +ALS + 
Sbjct: 111 GLARGYIE--LIRNTPLLVQIYLLYFVF--GPVLGL----------ERFTTAVLALSLFQ 156

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R+GL  +P+GQ EA  +LGL+     R V+LPQ +R I+PPLT++ ++L+KN
Sbjct: 157 GAYTAEIFRAGLNNIPKGQFEACSSLGLSAIDGYRFVILPQMIRRILPPLTNETVSLVKN 216

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           SS+   +   DL + G  I+  T    E+      IYL +++M++ F   L  K+
Sbjct: 217 SSIVSIMAIFDLTTEGRNIVADTAMPFEVWFTVAGIYLCVTLMLSGFAAWLEHKM 271


>gi|317486430|ref|ZP_07945257.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316922340|gb|EFV43599.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 255

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 1/142 (0%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F     V P F +  +AL  +  A++AE+ R+GL +VPR Q EA I+LGL      RL
Sbjct: 115 FLFAPAIGVGP-FGAAVLALGLFEGAYMAELFRAGLQSVPRAQWEAGISLGLGVWNTLRL 173

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA+R ++PPLTSQ ++L+K++SL  A+  ADL      +I  T  A EI LI   +
Sbjct: 174 VILPQAVRRMLPPLTSQLVSLIKDTSLVSAIAVADLTMQAQVLIADTFLAFEIWLIVAAL 233

Query: 374 YLSLSIMIALFMNRLNAKIALK 395
           YL+L++ +AL    +  + A +
Sbjct: 234 YLALTLCVALPARWMERRYAWR 255


>gi|300722326|ref|YP_003711611.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628828|emb|CBJ89406.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 246

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA I E VR+ + ++P+GQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FISSMICLGLFTAARICEQVRAAIQSLPKGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++++I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYIGINLVIMLAM 230

Query: 386 NRLNAKIAL 394
             L  KI L
Sbjct: 231 TLLEKKIRL 239



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   ++ GF  T  L+    I A I+G+L G  R   NK +A I   YVE+FRN+P
Sbjct: 17  GNTTYLGWLISGFQVTITLSICAWIIAFIVGSLFGILRTVPNKFLAGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V   LP
Sbjct: 77  LIVQFFTWYMVVPEFLP 93


>gi|283834046|ref|ZP_06353787.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291070189|gb|EFE08298.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 246

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           N +  KI L
Sbjct: 231 NLVERKIRL 239



 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ +  I A +IG+L G  R   N+ ++ I  +YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSGIGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  +  +LP               N G+ F +  +D N + F+ S    + L
Sbjct: 77  LIVQFFTWYLVIPELLP--------------ENIGMWFKS-ELDPNIQFFLSSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|121535518|ref|ZP_01667327.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermosinus carboxydivorans Nor1]
 gi|121305937|gb|EAX46870.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermosinus carboxydivorans Nor1]
          Length = 221

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 98/167 (58%), Gaps = 10/167 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I   + ++F  P+      + G  + P F++   A    + A++AEI R+G+ 
Sbjct: 64  GTPLLVQI---FIIYFAIPI------VIGQRIDP-FIAAITACGINSGAYVAEIFRAGIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQMEA  +LG++  +  R ++LPQA + IIPPL ++++ +LK+SSL   +GF +L 
Sbjct: 114 SIDKGQMEAGRSLGMSWAQTMRYIILPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELT 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  II +T  + EI L   FIYL +++ I+  ++ L  +  + +K
Sbjct: 174 RRGQLIIARTYGSFEIWLTVAFIYLVMTLTISRLVDYLERRYKIDDK 220


>gi|257455525|ref|ZP_05620757.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Enhydrobacter aerosaccus SK60]
 gi|257447094|gb|EEV22105.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Enhydrobacter aerosaccus SK60]
          Length = 257

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 9/210 (4%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FD 247
           ++ + ++G +L +      R    KT +A+   Y+S F    +P L+ +   + +   + 
Sbjct: 49  WLIALIIGTILGIM-----RTLPNKTARAIGTAYVSFFR--NIPLLIQLFFWFYVAPTWL 101

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L ++ F      +   +S  I L  +TAA I E VR+G+ ++P+GQ  AA ALG T 
Sbjct: 102 TPALQKWWFQELDPNTSAVISASIGLGLFTAARIVEQVRTGIESLPKGQTNAAYALGFTL 161

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQA R I+PP++S+  N  KN+S+A  VG  +L+S   TI   T   IE+ 
Sbjct: 162 PQTYRHIVLPQAFRVILPPMSSELTNCFKNASVASLVGVTELISQTKTISEYTQNNIEVY 221

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                IYL  ++++  FM  L  K+ +K +
Sbjct: 222 TFTTIIYLLFNLVLIYFMTWLEKKLRIKGQ 251



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 35/69 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +  Y   +L GF     +  SG + A IIGT++G  R   NK    I   YV  FRNIP
Sbjct: 26  GNEVYWQWLLTGFKWLLVIGGSGWLIALIIGTILGIMRTLPNKTARAIGTAYVSFFRNIP 85

Query: 141 PLVVIFFLY 149
            L+ +FF +
Sbjct: 86  LLIQLFFWF 94


>gi|312135671|ref|YP_004003009.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor owensensis OL]
 gi|311775722|gb|ADQ05209.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor owensensis OL]
          Length = 220

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 32/225 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232
           +T++  A       + G+V +LF  R+S+         F+    +  PLL    F+ +GL
Sbjct: 19  VTIELTAIAVTIGLIFGLVAALF--RISKIKLLNYVGSFYVWLFRGTPLLLQIFFIYYGL 76

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V            P L            P F++  IAL   + A+ AEI+R+ ++++
Sbjct: 77  PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+  
Sbjct: 115 DRGQYEAAKALGMTYIQTMRYVIIPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +QTG+  EI L  + IYL+L+ +     N L  ++   E+
Sbjct: 175 AQLKASQTGRDAEIYLAALVIYLALTTIFTTIFNWLEKRLGKYEQ 219


>gi|149002609|ref|ZP_01827541.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
 gi|147759220|gb|EDK66213.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
          Length = 492

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 300 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 349

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 350 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 402

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 403 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 462

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 463 FKMYAILAIFYLVIITLLTRLAKRLEKRI 491


>gi|56962546|ref|YP_174272.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908784|dbj|BAD63311.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 211

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 80/123 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YT+AFIAE +R+G+ A+P GQMEAA + GLT+ +A R V+LPQA++++IPPL +Q
Sbjct: 85  LGLLIYTSAFIAEAIRAGIQAIPTGQMEAARSSGLTYTQALRFVILPQAIKTVIPPLGNQ 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            LNL+KNSS+   VG ADL+  G  I + T     +  I    YL L+I ++  +     
Sbjct: 145 TLNLVKNSSILAVVGGADLMYQGDIINSMTFSPYAVYGIVALFYLLLTIPLSWGIGYYEK 204

Query: 391 KIA 393
           ++A
Sbjct: 205 RLA 207



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 38/66 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y  A L GF+ T   +   ++ + ++GTL+   R+S  +++ W+   YVE FRNIP L+
Sbjct: 7   DYWDAFLSGFLQTLKASTYALVGSFVVGTLIAVMRISTIRVLNWLGTAYVEFFRNIPLLL 66

Query: 144 VIFFLY 149
            +F  +
Sbjct: 67  TVFIFW 72


>gi|152974369|ref|YP_001373886.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152023121|gb|ABS20891.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 233

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 102/162 (62%), Gaps = 16/162 (9%)

Query: 235 LVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           +VLIA  +  +F  PV+G     F+ G+           AL+ YTA+FIAE +R+G+++V
Sbjct: 81  IVLIAFAF--YFAFPVVGVTLSGFVAGTA----------ALTIYTASFIAEAIRAGILSV 128

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  
Sbjct: 129 AKGQMEAARSSGLTYVQAMYYVVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQ 188

Query: 353 GGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  I  +T    ++ I + MF YL L++ +++ +  L  ++A
Sbjct: 189 GDLISTRTFVTFDVYIFVGMF-YLLLTVPLSMLVRYLEKRLA 229


>gi|257895699|ref|ZP_05675352.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257832264|gb|EEV58685.1| amino acid ABC transporter [Enterococcus faecium Com12]
          Length = 535

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 349 FALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 401

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 402 ---------------GFTI-PDFIAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 445

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 446 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 505

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 506 TYVYLIIAIMYLILITALTKLAKVLEKKV 534


>gi|152986056|ref|YP_001348447.1| putative amino acid permease [Pseudomonas aeruginosa PA7]
 gi|150961214|gb|ABR83239.1| probable amino acid permease [Pseudomonas aeruginosa PA7]
          Length = 238

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 10/172 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    F  FG+P L+   L   L+   + P+L   +F        EF++    L+ YT
Sbjct: 65  PLLVQLFFWYFGVPALLPEELVSWLNTPHETPLLDWPSF--------EFLAGAWGLTLYT 116

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +AF+AE  R+G+ +V   Q  A +ALGLT R+  R+V+LPQA+R+ +PPL  QY+N LKN
Sbjct: 117 SAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKN 176

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           SSLA+A+G A+L      +  +T +  +   I   +Y+    +I  F   L 
Sbjct: 177 SSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQ 228



 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 30/48 (62%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +G  +   RLS  +L++W  R Y+ +FRN P LV +FF Y  V ++LP
Sbjct: 35  VGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLFFWYFGVPALLP 82


>gi|170695394|ref|ZP_02886540.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139794|gb|EDT07976.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 246

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L  +TAA + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTLAYVLINLVVMQFM 230

Query: 386 NRLNAKIAL 394
             + AK  L
Sbjct: 231 RWVEAKTRL 239



 Score = 43.5 bits (101), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L GF  T  ++ S  + A I+G+L G  R   NK  + I  +YV +FRNIP
Sbjct: 18  EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIGTLYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 78  LIVQFFIWYLVIPELLP 94


>gi|331670094|ref|ZP_08370939.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA271]
 gi|331063007|gb|EGI34921.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA271]
          Length = 194

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 84/151 (55%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 150

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            +VL  LP P  ++      FL+NRGL  P+
Sbjct: 151 FAVLRNLPGPRQTVSAFDLAFLSNRGLYIPS 181


>gi|302872378|ref|YP_003841014.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302575237|gb|ADL43028.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 220

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 32/225 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232
           +T++  A       + G+V +LF  R+S+         F+    +  PLL    F+ +GL
Sbjct: 19  VTIELTAIAVTIGLIFGLVAALF--RISKIKLLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V            P L            P F++  IAL   + A+ AEI+R+ ++++
Sbjct: 77  PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+  
Sbjct: 115 DRGQYEAAKALGMTYIQTMRYVIIPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +QTG+  EI L  + IYL+L+ +     N L  ++   E+
Sbjct: 175 AQLKASQTGRDAEIYLAALVIYLALTTIFTTIFNWLEKRLGKYEQ 219


>gi|257887162|ref|ZP_05666815.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257898269|ref|ZP_05677922.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|257823216|gb|EEV50148.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257836181|gb|EEV61255.1| amino acid ABC transporter [Enterococcus faecium Com15]
          Length = 535

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 349 FALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 401

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 402 ---------------GFTI-PDFIAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 445

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 446 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 505

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 506 TYVYLIIAIMYLILITALTKLAKVLEKKV 534


>gi|77456604|ref|YP_346109.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380607|gb|ABA72120.1| amino acid ABC transporter membrane protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 319

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 17/207 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S VLG+++ L AT L R     T + L  +Y+   L+ G P LV I + Y        
Sbjct: 129 VVSGVLGLLIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGTPLLVQIFIFY-------- 177

Query: 251 LGQFNFIGG-STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                FIG    +S EF  +  ALS +T A++AEI+RSG+ ++ RGQ EAA +LGL+  +
Sbjct: 178 ----FFIGTVMNLSREFAGI-AALSLFTGAYVAEIIRSGVQSIARGQNEAARSLGLSAGQ 232

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + R V+LPQA + ++PPL  Q+++L+K++SL   +   +L+  G  +I  +    EI+  
Sbjct: 233 SMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFC 292

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              +YL +++ ++   +RL  ++A  +
Sbjct: 293 VAGLYLLINLPLSKIASRLERRLAQSD 319



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 46/97 (47%)

Query: 53  EKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112
           ++ +L++    L    G ++ +G V   +    A  +L G   T WL+    +   +IG 
Sbjct: 81  DEQHLTVDENSLQFAQGDDVAEGDVVGVTRHWAAGPLLWGLWTTLWLSVVSGVLGLLIGL 140

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G  RLS+N  +  +  +YVE+ R  P LV IF  Y
Sbjct: 141 ATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFY 177


>gi|324992737|gb|EGC24657.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
          Length = 729

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|148989263|ref|ZP_01820643.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|147925241|gb|EDK76320.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
          Length = 721

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 23/210 (10%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++  I    YL +  ++     RL  +I+
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRIS 721


>gi|293377691|ref|ZP_06623880.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|293571887|ref|ZP_06682903.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E980]
 gi|291608141|gb|EFF37447.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E980]
 gi|292643691|gb|EFF61812.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 500

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 314 FALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 366

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 367 ---------------GFTI-PDFIAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 410

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 411 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 470

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 471 TYVYLIIAIMYLILITALTKLAKVLEKKV 499


>gi|315221701|ref|ZP_07863617.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315189188|gb|EFU22887.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 727

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F      A R+         + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 535 FAIAMVIGIIFGMFSVSPVKALRVISEIFVDVIRGIPLMILAAFIFWGIPNLIESMTGHQ 594

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +       +F+ G+          IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 595 SPIN-------DFVAGT----------IALSLNAGAYIAEIVRGGIQAVPAGQMEASRSL 637

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 638 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 697

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 698 FKMYAILAVFYLIIITLLTRLAKRLEKRI 726


>gi|307709473|ref|ZP_07645930.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
 gi|307619787|gb|EFN98906.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
          Length = 721

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|269926020|ref|YP_003322643.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269789680|gb|ACZ41821.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobaculum terrenum ATCC BAA-798]
          Length = 246

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 19/219 (8%)

Query: 179 PTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF---GL 232
           P++       IF  V S +LGI+L L A  L R  H +    +P+  +IS F I+   G 
Sbjct: 15  PSIVRGAELTIFLSVVSQLLGILLGLVAA-LGRISHSR----IPVFRWISGFYIWLFRGT 69

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I   Y   F  P L          V PE  S  IALS    A++AEI+R+G+++V
Sbjct: 70  PLLVQIIFVY---FAIPQL-----TNQRVVIPEVPSAIIALSLNEGAYMAEIIRAGILSV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQMEAA++LG+T   A R ++LPQA+R IIPP  ++++++LKN+SL   +   +L+  
Sbjct: 122 EGGQMEAALSLGMTRWLAMRRIILPQAIRIIIPPTGNEFISMLKNTSLVAVISAHELLFA 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I + T +  E++ I    YL+++ + +    +L  +
Sbjct: 182 TQEIYSATFRYFELLTIASLWYLAMTTVASYLQGKLERR 220


>gi|324994617|gb|EGC26530.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|327462473|gb|EGF08797.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327474328|gb|EGF19734.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|327489715|gb|EGF21505.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 729

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|260771024|ref|ZP_05879952.1| putative amino acid ABC transporter permease protein [Vibrio
           furnissii CIP 102972]
 gi|260613913|gb|EEX39104.1| putative amino acid ABC transporter permease protein [Vibrio
           furnissii CIP 102972]
          Length = 186

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 102/191 (53%), Gaps = 23/191 (12%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R +   + +  +A+PLL +  ++ +GLP L  ++L    HF   V+              
Sbjct: 19  RQANRVYVEVVRAIPLLVLLLWIYYGLPVLFDLSLN---HFTAGVM-------------- 61

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                 ALS   +AF+AE+ R G+ A+ RGQ EAA ALGL   +  RLV+LPQA+R I+P
Sbjct: 62  ------ALSLAESAFMAEVFRGGIQAIDRGQHEAAQALGLRDWQKMRLVILPQALRHILP 115

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++ +LK SSL   +G +DL      ++      +EI    +  YL L ++++  +
Sbjct: 116 PLGNQFIYILKMSSLVSVIGLSDLTRRANELVVTEYLPLEIYTFLVLEYLILILLVSYGV 175

Query: 386 NRLNAKIALKE 396
            RL  K+AL +
Sbjct: 176 RRLEKKLALPQ 186


>gi|261344517|ref|ZP_05972161.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
 gi|282567429|gb|EFB72964.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 250

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 71/98 (72%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ L+ YT  FIAE VRSG+  V +GQ +AA ALGLT  +A +LV+LPQA++  +
Sbjct: 118 EFLAGFVGLTLYTVPFIAEEVRSGIRGVRQGQKQAAFALGLTSWQAMKLVVLPQAVKIAL 177

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PPL  QY+N++KNSSL +A+G A+L  V   + +Q+ Q
Sbjct: 178 PPLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQSLQ 215



 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 20/180 (11%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   +I AT++G +V + R S    + W    Y+ +FRN P LV +FF Y +
Sbjct: 27  GFLLTVWISVCTIIAATLLGFIVASARDSQIAPLRWFVSAYISIFRNTPLLVQLFFWYFA 86

Query: 152 VLSVLPIP-------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
              +LP          H +   FG+ L+    SF  L       ++   F+   V S   
Sbjct: 87  SGEILPASMMEWLNTPHEVHF-FGVMLSWP--SFEFLAGFVGLTLYTVPFIAEEVRS--G 141

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVS 263
            R  R   ++   AL L       +  LP  V IAL        P+LGQ+ N +  S+++
Sbjct: 142 IRGVRQGQKQAAFALGLTSWQAMKLVVLPQAVKIAL-------PPLLGQYMNVVKNSSLT 194


>gi|226310805|ref|YP_002770699.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093753|dbj|BAH42195.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 217

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 18/212 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    V SFVLG + ++F     R          PL +I+T  I  +  + LI + 
Sbjct: 21  TLQASLLALVGSFVLGTLFAIFRISPIR----------PLKWIATAYIEFVRNIPLILVV 70

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P +G         +   F++  + L+ YTAAFIAE +R+G+ A+P+GQ EAA 
Sbjct: 71  FLFFVGLPAIG--------IILEPFIAGTLGLTVYTAAFIAETIRAGIQAIPKGQTEAAR 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           + GLT+ +  R ++LPQA++ +IPP+ +Q++NL+KNSS+   +   DL+  G  I   T 
Sbjct: 123 SSGLTYGQTMRYIILPQAIKVVIPPMGNQFINLVKNSSVLGVIAGLDLMYYGDLISADTF 182

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     YL L++ ++ F++ L  ++A
Sbjct: 183 VTFDVYIFVAVFYLILTLPLSAFVSYLERRLA 214



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 34/60 (56%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF NT   +   ++ + ++GTL    R+S  + + WI   Y+E  RNIP ++V+F  +
Sbjct: 15  LKGFWNTLQASLLALVGSFVLGTLFAIFRISPIRPLKWIATAYIEFVRNIPLILVVFLFF 74


>gi|328946378|gb|EGG40519.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 729

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|257882917|ref|ZP_05662570.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884373|ref|ZP_05664026.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257889304|ref|ZP_05668957.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260560085|ref|ZP_05832263.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207427|ref|ZP_05922113.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289566473|ref|ZP_06446898.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|257818575|gb|EEV45903.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257820211|gb|EEV47359.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257825664|gb|EEV52290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260073920|gb|EEW62244.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078318|gb|EEW66023.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289161738|gb|EFD09613.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
          Length = 535

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 349 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 401

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 402 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 445

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 446 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 505

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 506 TYVYLIIAIMYLILITALTKLAKVLEKKV 534


>gi|258406609|ref|YP_003199351.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798836|gb|ACV69773.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 335

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 9/206 (4%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--H 245
           K+ V + +LGIVL +  T LSR       +   + YI   +I G P LV I L Y +   
Sbjct: 135 KVSVVAIILGIVLGVL-TGLSRISSNPALRWSAITYIE--IIRGSPLLVQIFLWYFVIGT 191

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
               +L Q N +G   +SP +  + I+L+ +T A++AEIVR+G+ +V RGQMEAA +LG+
Sbjct: 192 LVNSILAQ-NGLG--QISPLWFGI-ISLAVFTGAYVAEIVRAGIQSVSRGQMEAARSLGM 247

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ ++ R V+LPQA + I+P L  Q+++L+K+SSL   +   +L      ++  + Q  E
Sbjct: 248 TYTQSMRKVILPQAFKRILPALAGQFISLIKDSSLLGVISVRELTKATREVVTSSLQPFE 307

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +    +YL L+  ++L +  +  K
Sbjct: 308 LWITCAVLYLLLTFTLSLVVQYIERK 333



 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +I   ++G L G  R+S+N  + W    Y+E+ R  P LV IF  
Sbjct: 126 LLQGLWITLKVSVVAIILGIVLGVLTGLSRISSNPALRWSAITYIEIIRGSPLLVQIFLW 185

Query: 149 Y 149
           Y
Sbjct: 186 Y 186


>gi|325694667|gb|EGD36574.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 729

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|325687630|gb|EGD29651.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 729

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|298254350|ref|ZP_06977936.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19A]
          Length = 721

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|182684032|ref|YP_001835779.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|303254264|ref|ZP_07340373.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|303258876|ref|ZP_07344855.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|303261559|ref|ZP_07347506.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|303264230|ref|ZP_07350150.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|303266139|ref|ZP_07352032.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|303268134|ref|ZP_07353934.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|182629366|gb|ACB90314.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|301801904|emb|CBW34628.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           INV200]
 gi|302598758|gb|EFL65795.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|302637139|gb|EFL67627.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|302639819|gb|EFL70275.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|302642351|gb|EFL72698.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|302644309|gb|EFL74563.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|302646042|gb|EFL76269.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
          Length = 721

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|169834415|ref|YP_001694671.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|168996917|gb|ACA37529.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
          Length = 721

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|148985136|ref|ZP_01818375.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|148998673|ref|ZP_01826112.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|149019232|ref|ZP_01834594.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|168486561|ref|ZP_02711069.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|168575696|ref|ZP_02721611.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|221231935|ref|YP_002511087.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225854706|ref|YP_002736218.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|225860926|ref|YP_002742435.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229894|ref|ZP_06963575.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298502762|ref|YP_003724702.1| amino acid ABC superfamily transporter ATP-binding protein/permease
           [Streptococcus pneumoniae TCH8431/19A]
 gi|307067889|ref|YP_003876855.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|147755510|gb|EDK62558.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|147922581|gb|EDK73699.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|147931102|gb|EDK82081.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|183570457|gb|EDT90985.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|183578152|gb|EDT98680.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|220674395|emb|CAR68945.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225723631|gb|ACO19484.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|225727804|gb|ACO23655.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238357|gb|ADI69488.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|301794323|emb|CBW36748.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           INV104]
 gi|301800161|emb|CBW32766.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           OXC141]
 gi|306409426|gb|ADM84853.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|327389476|gb|EGE87821.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 721

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|241889480|ref|ZP_04776779.1| arginine transport system permease protein ArtQ [Gemella
           haemolysans ATCC 10379]
 gi|241863787|gb|EER68170.1| arginine transport system permease protein ArtQ [Gemella
           haemolysans ATCC 10379]
          Length = 213

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 109/183 (59%), Gaps = 11/183 (6%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSL 269
           G  + L  ISTF +      V+ A+  ++  + P+L Q   I       G + +P FMS 
Sbjct: 34  GIVVCLAKISTFKVLN----VIAAIYVEIIRNTPILVQIMIIYFALPEIGISFTP-FMSA 88

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  + A+++EI RSG++A+ +GQMEA  +LGL++ +  +L++LPQA+++ +P L +
Sbjct: 89  IIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPALGN 148

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++L+K SS+   VG AD++    T+ N T Q     L+   IY  ++ +++L + RL 
Sbjct: 149 EFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIYFIITSILSLLVKRLE 208

Query: 390 AKI 392
            K+
Sbjct: 209 KKL 211



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 35/66 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y T  L   V T  ++   ++   I+G +V   ++S  K++  I  +YVE+ RN P LV
Sbjct: 7   NYYTMYLEATVTTLKVSLIALLVGLILGIVVCLAKISTFKVLNVIAAIYVEIIRNTPILV 66

Query: 144 VIFFLY 149
            I  +Y
Sbjct: 67  QIMIIY 72


>gi|327470838|gb|EGF16294.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 729

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|324990984|gb|EGC22918.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 729

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|15901102|ref|NP_345706.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|111658436|ref|ZP_01409115.1| hypothetical protein SpneT_02000407 [Streptococcus pneumoniae
           TIGR4]
 gi|116516932|ref|YP_816569.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|149007101|ref|ZP_01830770.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|149012291|ref|ZP_01833360.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|168493162|ref|ZP_02717305.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|225856907|ref|YP_002738418.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|225859035|ref|YP_002740545.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|237649941|ref|ZP_04524193.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974]
 gi|307127172|ref|YP_003879203.1| amino acid ABC transporter amino acid-binding protein/permeae
           [Streptococcus pneumoniae 670-6B]
 gi|14972722|gb|AAK75346.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116077508|gb|ABJ55228.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|147761405|gb|EDK68371.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|147763617|gb|EDK70552.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|183576805|gb|EDT97333.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|225721475|gb|ACO17329.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|225725249|gb|ACO21101.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|306484234|gb|ADM91103.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 670-6B]
 gi|332074571|gb|EGI85045.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 721

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|328462014|gb|EGF34198.1| glutamine ABC transporter permease [Lactobacillus helveticus MTCC
           5463]
          Length = 175

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 106/181 (58%), Gaps = 15/181 (8%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K GK +  +YI+ F    +P LV++ + Y L   + ++    F  G+          I L
Sbjct: 8   KFGKIVAKVYIAIFR--NIPLLVIVMIFY-LIVPRYIVKLSGFQAGT----------IGL 54

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + YT+AFIAE VR+G+ ++  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++N
Sbjct: 55  TLYTSAFIAETVRAGISSISTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVN 114

Query: 334 LLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+KNSS LA   GF DL+     I   T + I+  ++    YL L++ ++ +M  L  K+
Sbjct: 115 LVKNSSVLAFVAGF-DLMYQAQLIAFSTFRTIDTYVVVGLFYLILTLPLSYYMRHLEKKL 173

Query: 393 A 393
           A
Sbjct: 174 A 174


>gi|325695929|gb|EGD37820.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 729

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|307706697|ref|ZP_07643503.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307617941|gb|EFN97102.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 721

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|257878496|ref|ZP_05658149.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257894317|ref|ZP_05673970.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257812724|gb|EEV41482.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257830696|gb|EEV57303.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
          Length = 535

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 349 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 401

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 402 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 445

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 446 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 505

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 506 TYVYLIIAIMYLILITALTKLAKVLEKKV 534


>gi|89897620|ref|YP_521107.1| hypothetical protein DSY4874 [Desulfitobacterium hafniense Y51]
 gi|89337068|dbj|BAE86663.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 224

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 113/203 (55%), Gaps = 10/203 (4%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GIV+ LF   L R  + +  + L + YI  F   G P LV + + Y   F  P L  F 
Sbjct: 32  IGIVIGLFMA-LMRLSNSRILRGLSIAYIDFFR--GTPLLVQLLMVY---FALPQLLNFQ 85

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                  + +F++   A+   + A+IAEI R+G+ ++ +GQ EAA +LG+T  +A R V+
Sbjct: 86  V----PDNYQFIAAITAMGLNSGAYIAEIFRAGIQSIDKGQGEAARSLGMTQGQAMRHVI 141

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA + +IPPL ++++ LLK+SSL   +   DL+  G  I+++T Q   I L     YL
Sbjct: 142 LPQAFKRVIPPLGNEFIALLKDSSLVSFIALQDLMYSGKLIVSRTYQPFVIYLEVALFYL 201

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
           +++++++ F+N    +    + +
Sbjct: 202 AMTLILSRFVNYTERRFGKSDNR 224


>gi|125718174|ref|YP_001035307.1| arginine/histidine ABC transporter permease [Streptococcus
           sanguinis SK36]
 gi|125498091|gb|ABN44757.1| Arginine/histidine ABC transporter, permease component, putative
           [Streptococcus sanguinis SK36]
          Length = 722

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 530 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 582

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 583 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 633 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 692

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 693 FRMYAILAVLYLIIITLLTRLAKRLEKRI 721


>gi|227551702|ref|ZP_03981751.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|227179143|gb|EEI60115.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
          Length = 487

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 301 FALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 353

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 354 ---------------GFTI-PDFIAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 397

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 398 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 457

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 458 TYVYLIIAIMYLILITALTKLAKVLEKKV 486


>gi|325690565|gb|EGD32568.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 729

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|69248956|ref|ZP_00604829.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|258615978|ref|ZP_05713748.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium DO]
 gi|293557298|ref|ZP_06675844.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1039]
 gi|293560170|ref|ZP_06676672.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1162]
 gi|294616498|ref|ZP_06696279.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1636]
 gi|294621567|ref|ZP_06700733.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium U0317]
 gi|68194329|gb|EAN08842.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|291590646|gb|EFF22374.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1636]
 gi|291598872|gb|EFF29923.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium U0317]
 gi|291600550|gb|EFF30856.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1039]
 gi|291605842|gb|EFF35274.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1162]
          Length = 500

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 314 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 366

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 367 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 410

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 411 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 470

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 471 TYVYLIIAIMYLILITALTKLAKVLEKKV 499


>gi|331700315|ref|YP_004336554.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
 gi|326955004|gb|AEA28701.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
          Length = 302

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 90/147 (61%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L AL  +L    P   +F  +  + +  +F +  + L    AA++AEIVR G+++V RGQ
Sbjct: 127 LAALYPRLSLGVPFGPEFISVDTNVLITQFAACLLGLGLNEAAYMAEIVRGGMLSVDRGQ 186

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALG+T  +  R ++LPQAMR I+PP  ++ +++LK +SL V +G+ +L++    I
Sbjct: 187 AEAAGALGMTRSQTMRRIVLPQAMRVIVPPTGNETISMLKTTSLVVVIGYFELLTSAQRI 246

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIAL 383
            NQ  Q I ++++  F YL L+ ++ +
Sbjct: 247 SNQNFQVIPLLIVAAFWYLVLTSLLTI 273


>gi|323351404|ref|ZP_08087060.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322122628|gb|EFX94339.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 729

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|322376796|ref|ZP_08051289.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M334]
 gi|321282603|gb|EFX59610.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M334]
          Length = 721

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTKLAKRLEKRI 720


>gi|313673773|ref|YP_004051884.1| amino acid abc transporter membrane protein, paat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940529|gb|ADR19721.1| amino acid ABC transporter membrane protein, PAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 315

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 19/204 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + V+GIV     T L R       K L + Y+   LI G P LV I + Y          
Sbjct: 131 AIVIGIV-----TGLCRISSNVALKKLAVTYVE--LIRGTPLLVQIFIFY---------- 173

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              FIG         S   AL+ +  A+IAEIVR+G+ ++P+GQMEA+ +LG+ + +A R
Sbjct: 174 --FFIGTVFKLDRITSGIAALAIFAGAYIAEIVRAGIQSIPKGQMEASRSLGMNYFQAMR 231

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA++  +PP+  Q+++L+K+SSL   +   DL   G  I++ T    E+  +   
Sbjct: 232 YVILPQAIKRTLPPMAGQFISLIKDSSLVSVISITDLTKAGREIVSSTFSPFEVWFVVAV 291

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           +YL L+  ++  +  L  ++A  +
Sbjct: 292 MYLVLTSGLSFLVQILERRLAASD 315



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           VG  NT +++F  ++ A +IG + G  R+S+N  +  +   YVE+ R  P LV IF  Y
Sbjct: 115 VGLWNTLYISFVSILIAIVIGIVTGLCRISSNVALKKLAVTYVELIRGTPLLVQIFIFY 173


>gi|293568103|ref|ZP_06679440.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1071]
 gi|294617429|ref|ZP_06697063.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1679]
 gi|291589185|gb|EFF20996.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1071]
 gi|291596335|gb|EFF27594.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1679]
          Length = 500

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 314 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 366

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 367 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 410

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 411 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 470

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 471 TYVYLIIAIMYLILITALTKLAKVLEKKV 499


>gi|148658093|ref|YP_001278298.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus sp. RS-1]
 gi|148570203|gb|ABQ92348.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus sp. RS-1]
          Length = 403

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 19/205 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFSF LG++L+L      R       + L + YI   LI G+P    I++ +      P+
Sbjct: 211 VFSFPLGVLLAL-----GRQSSLPVVRWLCVAYIE--LIRGVP---FISVLFMAQLMLPL 260

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+ G T+    +     +  ++AA++AE VR GL ++PRGQ EAA ALGL   K 
Sbjct: 261 -----FLPGITID-RVVRAMAGVVIFSAAYLAENVRGGLQSIPRGQYEAARALGLNPWKM 314

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367
           T L++LPQA+R++IP L  Q++ L K++SL V VG  DL+ +  T++ Q    G   E+ 
Sbjct: 315 TLLIILPQALRAVIPILVGQFIALFKDTSLVVIVGLLDLMGIARTVLAQPDFLGLQAEVY 374

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
               FIY     +++ F  RL AK+
Sbjct: 375 TFVAFIYGIFCYLMSAFSQRLEAKL 399


>gi|15807149|ref|NP_295878.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6459953|gb|AAF11703.1|AE002049_8 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 291

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 85/133 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF S  IAL+    A+ AE++R+G++AVPRGQ EAA +LGL+  +    V+LPQA+R ++
Sbjct: 159 EFWSAVIALALNVGAYNAEVIRAGILAVPRGQSEAARSLGLSAGQTMNAVVLPQALRIVV 218

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +  + LLK+SSLA  +   +L   G  + +++ Q + ++     +YL+L+ ++ LF
Sbjct: 219 PPLVNNLVALLKDSSLASTIALLELTLSGQRVSSESFQPVPVLTTVAAVYLALTTVLTLF 278

Query: 385 MNRLNAKIALKEK 397
            ++L  ++ +  +
Sbjct: 279 TDQLEKRVKIASR 291


>gi|194398103|ref|YP_002037841.1| ABC transporter amino acid-binding protein/permease [Streptococcus
           pneumoniae G54]
 gi|194357770|gb|ACF56218.1| ABC transporter, amino acid-binding protein/permease protein
           [Streptococcus pneumoniae G54]
          Length = 721

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|157369456|ref|YP_001477445.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157321220|gb|ABV40317.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 246

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++ +I LFM
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLFM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVERKVQL 239



 Score = 43.5 bits (101), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A  +G+L G  R   N+ ++ +   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSTLGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  +  +LP               N G+ F T  +D N + FV S    + L
Sbjct: 77  LIVQFFTWYLVIPELLPA--------------NMGMWFKT-ELDPNVQFFVSSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|314939959|ref|ZP_07847159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314942568|ref|ZP_07849402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314947466|ref|ZP_07850881.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314952490|ref|ZP_07855491.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314992413|ref|ZP_07857839.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996253|ref|ZP_07861312.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313589575|gb|EFR68420.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593048|gb|EFR71893.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313595396|gb|EFR74241.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313598672|gb|EFR77517.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640793|gb|EFS05373.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313646016|gb|EFS10596.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 487

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  LF      A R     +    + +P++ ++ F+ FGLP +V       
Sbjct: 301 FALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMMVLAFFIFFGLPGIV------- 353

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G T+ P+F++  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 354 ---------------GFTI-PDFLAGVITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 397

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 398 GLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQTGKIIVARTTQS 457

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + LI   +YL L   +      L  K+
Sbjct: 458 TYVYLIIAIMYLILITALTKLAKVLEKKV 486


>gi|51245835|ref|YP_065719.1| glutamine ABC-transporter, permease protein (GlnP) [Desulfotalea
           psychrophila LSv54]
 gi|50876872|emb|CAG36712.1| probable glutamine ABC-transporter, permease protein (GlnP)
           [Desulfotalea psychrophila LSv54]
          Length = 222

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 29/213 (13%)

Query: 191 VFSFVLGIVL------SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           VF FVLG+V       +L+  R    F+ +T +  P+L  + FL FGLP    +A  ++L
Sbjct: 33  VFGFVLGVVFGLMKLSTLWPVRKIAGFYIETIRGTPMLVQAMFLYFGLP----MAFGFRL 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                              P   +  I ++  + A+IAEIVR  + ++  GQMEA  ++G
Sbjct: 89  -------------------PALAAGVIVIAINSGAYIAEIVRGAVQSIDSGQMEAGRSIG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +A R V+ PQA R +IPPL +Q++  LK++SL + +G  +L+     I+    +A 
Sbjct: 130 LTSLQAMRYVIWPQAFRRMIPPLGNQFIISLKDTSLLMIIGVGELLRTADEIVAVNFRAF 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E+ L    IYL++++ IA  +  +  ++ ++ +
Sbjct: 190 EVYLACGLIYLAMTMSIARVLKIVEKRLQIQGR 222


>gi|295702499|ref|YP_003595574.1| glutamine ABC transporter permease GlnM [Bacillus megaterium DSM
           319]
 gi|294800158|gb|ADF37224.1| glutamine ABC transporter, permease protein GlnM [Bacillus
           megaterium DSM 319]
          Length = 211

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 85/124 (68%), Gaps = 2/124 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YTAAFIAE +R+G++AVP+GQ+EAA + GLT+ +A R ++LPQA++ +IPPL +Q
Sbjct: 86  LGLTIYTAAFIAEAIRAGIMAVPKGQLEAARSSGLTYGQAMRFIILPQAIKIVIPPLGNQ 145

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS L +  GF DL+     + ++T    ++ +     YL L+I ++L +  L 
Sbjct: 146 FINLVKNSSVLGIVAGF-DLMYQADLVSSRTYVVFDVYIFVALFYLVLTIPLSLGVGYLE 204

Query: 390 AKIA 393
            ++ 
Sbjct: 205 KRLG 208


>gi|226355645|ref|YP_002785385.1| ABC transporter permease [Deinococcus deserti VCD115]
 gi|226317635|gb|ACO45631.1| putative ABC transporter, permease component [Deinococcus deserti
           VCD115]
          Length = 264

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 8/210 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V S V+G+V+ + A  + +       +A   L+I  +LI G P LV I   Y  +  
Sbjct: 63  QLTVVSGVIGLVIGMIAG-IQKTSSNWLVRAPASLFI--WLIRGTPLLVQILFVY--NAL 117

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+L     IG      EF S  IAL+    A+ AE++R+G++A+PRGQ EAA +LGL+ 
Sbjct: 118 PPLLAA---IGLKVELNEFWSAVIALALNVGAYNAEVIRAGILAIPRGQTEAARSLGLSG 174

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
                 V+LPQA+R ++PPL +  + LLK+SSLA  +   +L   G  + +++ Q + ++
Sbjct: 175 GLTMSTVVLPQALRIVVPPLVNNLVALLKDSSLASTIALLELSLAGSRVSSESFQPVPVL 234

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +YL+L+ ++ LF ++L  ++ +  +
Sbjct: 235 TTIAAVYLALTTVMTLFTDQLEKRVKVASR 264


>gi|307704942|ref|ZP_07641833.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
 gi|307621556|gb|EFO00602.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
          Length = 721

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTKLAKRLEKRI 720


>gi|323142137|ref|ZP_08076982.1| glutamine ABC transporter, permease protein GlnP
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413397|gb|EFY04271.1| glutamine ABC transporter, permease protein GlnP
           [Phascolarctobacterium sp. YIT 12067]
          Length = 216

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 13/179 (7%)

Query: 220 PLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           PL Y +      I G P LV I L Y   F  P     N IG S V P F++   A S  
Sbjct: 48  PLRYFANVYVDFIRGTPLLVQIFLVY---FALP-----NIIG-SRVDP-FVAAISACSIN 97

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AEI R+G+ ++ +GQMEA  +LG+T  +  R +++PQA + IIPPL ++++ +LK
Sbjct: 98  SGAYVAEIFRAGIQSIDKGQMEAGRSLGMTWAQTMRYIIMPQAFKRIIPPLGNEFIAMLK 157

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SSL   +GF +L   G  II +T  + EI +    IYL ++  +A F   L  +   K
Sbjct: 158 DSSLVSVIGFEELTRRGQLIIARTYASFEIWMAVAIIYLIMTFAVARFTGYLERRFDTK 216


>gi|270263716|ref|ZP_06191985.1| transporter [Serratia odorifera 4Rx13]
 gi|270042600|gb|EFA15695.1| transporter [Serratia odorifera 4Rx13]
          Length = 246

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FISSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I LFM
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIGINAVIMLFM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 43.5 bits (101), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A  +G+L G  R   N+ ++ +   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSALGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP               N G+ F T  +D N + F+ S    + L
Sbjct: 77  LIVQFFTWYLVVPELLPA--------------NLGMWFKT-ELDPNVQFFISSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|219670747|ref|YP_002461182.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219541007|gb|ACL22746.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 224

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 20/208 (9%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPV 250
           +GIV+ LF   L R  + +  +   + YI  F   G P LV I + Y      L+F  P 
Sbjct: 32  MGIVIGLFMA-LMRLSNSRILRGFAIAYIDFFR--GTPLLVQILMVYFAVPQLLNFQIP- 87

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              + FI G +          A+   + A+IAEI R+G+ ++ +GQ EAA +LG+T  +A
Sbjct: 88  -DNYQFIAGIS----------AMGLNSGAYIAEIFRAGIQSIDKGQGEAARSLGMTQGQA 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA + +IPPL ++++ LLK+SSL   +   DL+  G  I+++T Q   I L  
Sbjct: 137 MRHVILPQAFKRVIPPLGNEFIALLKDSSLVSFIALQDLMYSGKLIVSRTYQPFVIYLEV 196

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL+++++++ F+N    +    + +
Sbjct: 197 ALFYLAMTLILSRFVNYTERRFGKSDNR 224


>gi|90962415|ref|YP_536331.1| glutamine transport system permease protein [Lactobacillus
           salivarius UCC118]
 gi|227891535|ref|ZP_04009340.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|301299246|ref|ZP_07205533.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90821609|gb|ABE00248.1| Glutamine transport system permease protein [Lactobacillus
           salivarius UCC118]
 gi|227866682|gb|EEJ74103.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|300215038|gb|ADJ79454.1| Glutamine transport system permease protein [Lactobacillus
           salivarius CECT 5713]
 gi|300853206|gb|EFK80803.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 212

 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/124 (45%), Positives = 81/124 (65%), Gaps = 2/124 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE VR+G+ AV  GQME A A GLT+ +  R ++LPQA + +IPPL +Q
Sbjct: 90  IGLTLYTSAFIAETVRAGIKAVGVGQMEGARANGLTYWQTMRYIILPQAFKLVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I + + + I   L+    YL L++ ++ +M  L 
Sbjct: 150 FINLIKNSSVLAFVAGF-DLMYQGDVIASASFETINTYLVVGVFYLILTLPLSYYMRYLE 208

Query: 390 AKIA 393
            K+A
Sbjct: 209 KKLA 212



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 33/60 (55%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF NT   +   +  + IIG++    +   +KLV  I  +Y+E+FRNIP LV+    Y
Sbjct: 13  LTGFENTILCSVIALFFSLIIGSIFAILQTVPSKLVRTIANIYIEIFRNIPLLVITMVFY 72


>gi|168491161|ref|ZP_02715304.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
 gi|183574490|gb|EDT95018.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
          Length = 721

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|50120252|ref|YP_049419.1| glutamate/aspartate transport system permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610778|emb|CAG74223.1| glutamate/aspartate transport system permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 246

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINAVIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 QVVERKTRL 239



 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   IL G   T  L+    I A +IG+L G  R   N+ ++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLSSIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP+              N G+ F    +D N + F+ S    I L
Sbjct: 77  LIVQFFTWYLVVPELLPV--------------NIGMWFKA-ELDPNIQFFLSSM---ICL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|261822383|ref|YP_003260489.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261606396|gb|ACX88882.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 246

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 QVVERKTRL 239



 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   IL G   T  L+    I A +IG+L G  R   N+ ++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLSSIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP+              N G+ F    +D N + F+ S    I L
Sbjct: 77  LIVQFFTWYLVVPELLPV--------------NIGMWFKA-ELDPNIQFFLSSM---ICL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|226938962|ref|YP_002794033.1| GltJ [Laribacter hongkongensis HLHK9]
 gi|226713886|gb|ACO73024.1| GltJ [Laribacter hongkongensis HLHK9]
          Length = 248

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/144 (40%), Positives = 87/144 (60%), Gaps = 5/144 (3%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N++  S   PEF +  IAL  YT+A +AE VR+G++ + RGQ  A +ALGLT  +  R V
Sbjct: 99  NWVKQSMPLPEFSTAVIALGFYTSARVAEQVRTGILTLSRGQKNAGLALGLTLGQTYRYV 158

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LP A R I+PPLTS+++N+ KNS++A+A+G  +L      +   TG+      I +  Y
Sbjct: 159 MLPMAFRIIVPPLTSEFMNIFKNSAVALAIGLTELTF---QMRQMTGEYAPANPIEVMTY 215

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
            SL  +I  F   +N  +AL EKK
Sbjct: 216 TSLLYLIVAF--SVNRIMALVEKK 237



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 15/116 (12%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I QG VP T +  Y   +L G   T   A    I A +IGTLVG GR   NK V+ +   
Sbjct: 11  ILQG-VPDTEEFYYQ-WLLSGLGWTIATALCAWIIALVIGTLVGVGRTVPNKAVSGLTTA 68

Query: 132 YVEVFRNIPPLVVIFFLY------------KSVLSVLPIPDHSI-VLPFGMFLNNR 174
           YVE+FRN+P +V +F  +              V   +P+P+ S  V+  G + + R
Sbjct: 69  YVELFRNVPLIVQMFLWFFVFPEFLPETASNWVKQSMPLPEFSTAVIALGFYTSAR 124


>gi|297521618|ref|ZP_06940004.1| predicted amino-acid transporter subunit [Escherichia coli OP50]
          Length = 163

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 78/138 (56%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
           W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    +VG +NT  ++  
Sbjct: 12  WLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSAL 71

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y +VL  LP P  +
Sbjct: 72  CIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQA 131

Query: 163 IVLPFGMFLNNRGLSFPT 180
           +      FL+NRGL  P+
Sbjct: 132 VSAFDLAFLSNRGLYIPS 149


>gi|289168045|ref|YP_003446314.1| ABC transporter membrane spanning permease-glutamine transport
           [Streptococcus mitis B6]
 gi|288907612|emb|CBJ22449.1| ABC transporter membrane spanning permease-glutamine transport
           [Streptococcus mitis B6]
          Length = 721

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTKLAKRLEKRI 720


>gi|295426473|ref|ZP_06819123.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
 gi|295063841|gb|EFG54799.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
          Length = 213

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 84/129 (65%), Gaps = 2/129 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L+ YT+AFIAE VRSG+ ++  GQME A + G+T+ +A R V+LPQAM+ +IP
Sbjct: 85  FQSGTIGLTLYTSAFIAETVRSGINSIGEGQMEGARSNGMTYIQAMRYVILPQAMKIVIP 144

Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PL +Q++NL+KNSS LA   GF DL+     I   + Q I+  ++    YL L++ ++ +
Sbjct: 145 PLGNQFVNLIKNSSVLAFVAGF-DLMYQAQLIAFASFQTIDTYIVVGLFYLVLTLPLSYY 203

Query: 385 MNRLNAKIA 393
           +  L  K+A
Sbjct: 204 LRHLEKKLA 212



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           ++ L GF NT   +   +I + I+G       ++  K V  I  +Y+EVFRNIP LV++ 
Sbjct: 10  SSFLTGFWNTILCSVIALIFSLILGIFFAMLEVAPPKFVRIIAHIYIEVFRNIPLLVIVM 69

Query: 147 FLY 149
             Y
Sbjct: 70  IFY 72


>gi|167562820|ref|ZP_02355736.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia oklahomensis EO147]
          Length = 241

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 85/149 (57%), Gaps = 18/149 (12%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-----IGGSTV---SPEFMSLYI 271
           PL+    F  FG+ +L+           +PV+   N      +GG  +   S EF++ ++
Sbjct: 64  PLVVQLLFWYFGVASLL----------PEPVMAWLNARHAIAVGGVELHWPSFEFVAGWV 113

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LSCYT+AF+AE   +GL  VP GQ  AA ALGL   +  R V+LPQA+R  +PPL  QY
Sbjct: 114 GLSCYTSAFVAEEFHAGLRGVPAGQYHAASALGLAPLQTLRFVVLPQAVRIALPPLFGQY 173

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +NL+KNSSL +A+G A+L      +  +T
Sbjct: 174 MNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|322385682|ref|ZP_08059326.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321270420|gb|EFX53336.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 724

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F      A R+         + +PL+ ++ F+ +G+P L+       
Sbjct: 532 FAIAMVIGIIFGMFSVSPIKALRIISEIFVDVIRGIPLMILAAFIFWGIPNLL------- 584

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I       +F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 585 ----ESMTGQQSPIN------DFVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 634

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 635 GISYGKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 694

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I   +YL +  ++     RL  +I
Sbjct: 695 FKMYAILAVLYLVIITLLTRLAKRLEKRI 723


>gi|312621848|ref|YP_004023461.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202315|gb|ADQ45642.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 220

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 38/235 (16%)

Query: 178 FPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLY 223
           FP L      T++  A       V G+V +LF  R+S+         F+    +  PLL 
Sbjct: 10  FPVLLKASVVTIELTAIAVTIGLVFGLVAALF--RISKIKLLNYIGSFYVWLFRGTPLLL 67

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              F+ +GLP +V            P L            P F++  IAL   + A+ AE
Sbjct: 68  QIFFIYYGLPKIV------------PAL----------TLPAFLAGAIALIINSGAYTAE 105

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+ ++++ RGQ EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   
Sbjct: 106 IIRAAILSIDRGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVST 165

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  +L+       + TG+  EI L  + IYL+L+ + +   N L  ++   E++
Sbjct: 166 IGMVELMRAAQLKASATGRDAEIYLAALVIYLALTTVFSTIFNWLEKRLGKYEQR 220


>gi|227114974|ref|ZP_03828630.1| glutamate/aspartate transport system permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
 gi|227327384|ref|ZP_03831408.1| glutamate/aspartate transport system permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 246

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 QVVERKTRL 239



 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   IL G   T  L+    I A +IG+L G  R   N+ +A I   YVE+FRN+P
Sbjct: 17  GNTTYLGWILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLAGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP+              N G+ F    +D N + F+ S    I L
Sbjct: 77  LIVQFFTWYLVVPELLPV--------------NIGMWFKA-ELDPNIQFFLSSM---ICL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|326803927|ref|YP_004321745.1| putative glutamate/glutamine/aspartate/asparagine transport system
           permease protein BztB [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650859|gb|AEA01042.1| putative glutamate/glutamine/aspartate/asparagine transport system
           permease protein BztB [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 213

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 77/123 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIA++VRSG+ AVP GQMEA ++ G T  +    ++ PQA+R +IPPL +Q
Sbjct: 90  IGLTIYTSAFIADVVRSGIEAVPHGQMEAGLSQGFTATETMVYIIFPQAVRIVIPPLGNQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+KNSS+   V   DL+  G  I ++T    +  ++    YL L+I +   M  L  
Sbjct: 150 FINLVKNSSILAMVAGLDLMYFGDLIASETFNTFDSYILVALFYLVLTIPLTALMQYLER 209

Query: 391 KIA 393
           +++
Sbjct: 210 RLS 212



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 43/67 (64%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++Y++ + +GF NT  ++   ++ + +IG+LVG  + S  K +  +  +YVE FRNIP L
Sbjct: 6   NNYSSELFLGFKNTIMVSVLALVFSLVIGSLVGIMQTSHPKGLRMLGDIYVEFFRNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|199599085|ref|ZP_03212491.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229553195|ref|ZP_04441920.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258509001|ref|YP_003171752.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258540195|ref|YP_003174694.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|199590048|gb|EDY98148.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229313491|gb|EEN79464.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257148928|emb|CAR87901.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257151871|emb|CAR90843.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259650294|dbj|BAI42456.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 220

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 30/167 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +     FSFVLG++L L      ++F    G      + LPLL I  F  F LP 
Sbjct: 22  VTLEVSIASIFFSFVLGVILGLARYVKIKYFSAAVGFVIDVIRNLPLLLILFFTYFALPD 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + +               + N I  + V         A+S + +A +AEIVRSG+ AVPR
Sbjct: 82  IGI---------------RLNVIVAAIV---------AMSIFESAMLAEIVRSGINAVPR 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           GQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA
Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164


>gi|213052443|ref|ZP_03345321.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
          Length = 187

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 52  FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 111

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 112 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 171

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 172 SLVERKVRL 180


>gi|229587938|ref|YP_002870057.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229359804|emb|CAY46654.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 319

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 17/207 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S +LG+ + L AT L R     T + L  +Y+   L+ G P LV I + Y        
Sbjct: 129 VVSGILGLAIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGTPLLVQIFIFY-------- 177

Query: 251 LGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                FIG    +S EF  +  ALS +T A++AEIVR+G+ ++ RGQ EAA +LGL+  +
Sbjct: 178 ----FFIGTVLNLSREFAGI-AALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQ 232

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + R V+LPQA + ++PPL  Q+++L+K++SL   +   +L+  G  +I  +    EI+  
Sbjct: 233 SMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFC 292

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              +YL +++ ++   +RL  ++A  +
Sbjct: 293 VAGLYLLINLPLSKMASRLERRLAQSD 319



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 37/81 (45%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           G ++ +G V   +       ++ G   T WL+    I    IG   G  RLS+N  +  +
Sbjct: 97  GDDVAEGDVVGVTRHWALGPLMWGLWTTLWLSVVSGILGLAIGLATGLCRLSSNPTLRDL 156

Query: 129 CRVYVEVFRNIPPLVVIFFLY 149
             +YVE+ R  P LV IF  Y
Sbjct: 157 STIYVELVRGTPLLVQIFIFY 177


>gi|73540164|ref|YP_294684.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72117577|gb|AAZ59840.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 242

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 85/140 (60%), Gaps = 6/140 (4%)

Query: 258 GGSTV------SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           GG T+      + +F++  + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  
Sbjct: 93  GGETIKQMNPFTQQFLAAMLCLGTFTAARVCEQVRSGINSLPRGQKNAGLAMGFTLPQTY 152

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R VLLP A R I+PPLTS++LN+ KNS++A  +G  +L + G  +++ T +  E  +   
Sbjct: 153 RFVLLPMAFRVIVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTARPYESFIAVT 212

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            +Y  ++I++ L M  + A+
Sbjct: 213 VMYALINIVVMLVMRWVEAR 232



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   ++ G   T  L  S  + A  IG+++G  R   NK ++     YVE+FRNIP
Sbjct: 16  QNETYLDWMISGLKVTIALGLSSWVIALAIGSVLGVLRTVPNKWLSGFAAAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y     +LP
Sbjct: 76  LLVQLFIWYFVGPELLP 92


>gi|322412041|gb|EFY02949.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 725

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFA---TRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+  + A   T+  RH         + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 533 FAIAMIIGIIFGMMAVSPTKSLRHISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 592

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 593 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 633

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL +    R V+LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 634 SLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 693

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 694 QSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724


>gi|75910090|ref|YP_324386.1| amino acid ABC transporter permease [Anabaena variabilis ATCC
           29413]
 gi|75703815|gb|ABA23491.1| L-arginine ABC transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-arginine-binding
           protein / L-histidine-binding protein / L-histidine ABC
           transporter membrane protein / L-lysine-binding protein
           / L-lysine ABC transporter membrane protein /
           L-glutamine-binding protein [Anabaena variabilis ATCC
           29413]
          Length = 501

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 20/174 (11%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL +  F+I FG+P L    L +  +FD+ V G                  IALS 
Sbjct: 331 RGTPLL-VQIFMIYFGIPALAQ-QLGFTFNFDRWVAG-----------------VIALSV 371

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+IAEIVR+G+ ++  GQ EAA +LGL      RLV+ PQA R ++PPL +++++LL
Sbjct: 372 NAAAYIAEIVRAGIQSIEIGQTEAAKSLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLL 431

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           K++SL   +GF +L   G  I+    +A EI      +YL L+++ +  ++RL 
Sbjct: 432 KDTSLVAVIGFEELFRKGQLIVADNYRAFEIYAAVAIVYLCLTLLASQVLSRLE 485


>gi|238790775|ref|ZP_04634534.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia frederiksenii ATCC 33641]
 gi|238721133|gb|EEQ12814.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia frederiksenii ATCC 33641]
          Length = 246

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITIGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 43.5 bits (101), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP+         GM+  +         +D N + F+ S    I L
Sbjct: 77  LIVQFFTWYLVVPELLPV-------DIGMWFKSE--------LDPNIQFFLSSM---ICL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|295096602|emb|CBK85692.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC
           transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 246

 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230

Query: 386 NRLNAKIAL 394
           N +  K+ L
Sbjct: 231 NLVERKVRL 239



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ +  I A ++G+L G  R   N+ ++ I  +YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSIGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  +  +LP               + G+ F    +D N + FV S    + L
Sbjct: 77  LIVQFFTWYLVIPELLP--------------EDLGMWFKA-ELDPNVQFFVSSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|323701355|ref|ZP_08113029.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum nigrificans DSM 574]
 gi|323533614|gb|EGB23479.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum nigrificans DSM 574]
          Length = 223

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 106/174 (60%), Gaps = 13/174 (7%)

Query: 226 TFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T++I G+P L+ L+ L Y L F   +L +F      TV+       + LS    A+IAEI
Sbjct: 62  TWVIRGVPLLLQLMFLYYGLAFAGIMLDEF------TVA------VLGLSVCGGAYIAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G++++ RGQMEAA+++G+T+ +A R V+LPQA R ++PP+ ++++ L+K+S+L   +
Sbjct: 110 IRAGILSIDRGQMEAALSMGMTYAQAMRRVILPQAYRRLLPPMGNEFITLMKDSALVSVI 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L+     + + T + +E+ +    +YL ++    +  +RL  K+A+ + K
Sbjct: 170 TMTELLRSATQLQSVTFRPVEVYITAGLLYLIMTTFFTIVFDRLERKLAVSDGK 223



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L    ++  T+IG +V   ++S+ K++ WI  +Y  V R +P L+ + FL
Sbjct: 18  LLKGAVMTIKLTAFAIVFGTLIGLIVALAKISSIKILNWIGGLYTWVIRGVPLLLQLMFL 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|253687585|ref|YP_003016775.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754163|gb|ACT12239.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 246

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 QIVERKTRL 239



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   IL G   T  L+    I A ++G+L G  R   N+ VA I   YVE+FRN+P
Sbjct: 17  GNTTYLGWILSGLQVTVTLSICAWIIAFLVGSLFGILRTVPNRFVAGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFTWYLVVPELLP 93


>gi|330448488|ref|ZP_08312136.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492679|dbj|GAA06633.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 272

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 100/187 (53%), Gaps = 21/187 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+  +A   +F+ + G++     T L R  H   G+ L   YI   LI   P LV I L
Sbjct: 75  ITLKISAISLIFTVLFGLI-----TALLRVSHSVVGRGLARGYIE--LIRNTPLLVQIYL 127

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            Y             F+ G  +  E F +  +ALS +  A+ AEI R+GLI +P+GQ EA
Sbjct: 128 LY-------------FVFGPMLGLERFTTAVLALSLFQGAYTAEIFRAGLINIPKGQFEA 174

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGL+   + R ++LPQ +R I+PPLT++ ++L+KNSS+   +   DL + G  I+  
Sbjct: 175 AESLGLSKMDSYRYIILPQMLRRILPPLTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVAD 234

Query: 360 TGQAIEI 366
           T    EI
Sbjct: 235 TAMPFEI 241


>gi|169831297|ref|YP_001717279.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Desulforudis audaxviator MP104C]
 gi|169638141|gb|ACA59647.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Desulforudis audaxviator MP104C]
          Length = 235

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 119/221 (53%), Gaps = 17/221 (7%)

Query: 188 KIFVFSFVLGIVLSLFA--TRLSRHF---HEKTG-----KALPLLYISTFLIFGLPTLVL 237
           +I V S   G ++ LFA   RLSR     +  TG     +  PLL     L FG+P +V 
Sbjct: 20  QITVLSVGFGCIIGLFAGLCRLSRSRVLRYLATGYVDFFRGTPLLVQIFMLYFGMPQVVE 79

Query: 238 IALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +   Y L+ +  P       +  S VS  ++++ +  S  + A+IAEI R+G+ ++ RGQ
Sbjct: 80  MLQLYLLNEYGIP-----KMVDVSNVSRYWIAV-LGCSLNSGAYIAEIFRAGVQSIERGQ 133

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           MEAA +LG+T  +A R V+LPQA + +IPPL ++++ +LK++SL   +G  +L   G  I
Sbjct: 134 MEAARSLGMTQNQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGVEELTRKGQLI 193

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I    Q+  I      IYL +++  +  ++ L  ++   ++
Sbjct: 194 IAVNYQSAAIWFAVAMIYLLMTLTFSRIVDWLERRLKTDDR 234



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   TF +    +    IIG   G  RLS ++++ ++   YV+ FR  P LV IF L
Sbjct: 11  LLVGAKLTFQITVLSVGFGCIIGLFAGLCRLSRSRVLRYLATGYVDFFRGTPLLVQIFML 70

Query: 149 Y 149
           Y
Sbjct: 71  Y 71


>gi|91789745|ref|YP_550697.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698970|gb|ABE45799.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 240

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 7/135 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ +  AL  +T+A IAE VR+G+ A+PRGQ  A +A+G T  +  R V+LP A+R I
Sbjct: 97  PGFVLVVFALGFFTSARIAEQVRAGVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRII 156

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +NLLKNSS+A AV  A+L         +T + +E       IYL+++ + A+
Sbjct: 157 IPPLTSESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVE-------IYLAVTALYAV 209

Query: 384 FMNRLNAKIALKEKK 398
               +N  +A  EKK
Sbjct: 210 SAFTVNRIMAFIEKK 224


>gi|329766800|ref|ZP_08258330.1| hypothetical protein HMPREF0428_00027 [Gemella haemolysans M341]
 gi|328839311|gb|EGF88893.1| hypothetical protein HMPREF0428_00027 [Gemella haemolysans M341]
          Length = 213

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 109/183 (59%), Gaps = 11/183 (6%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSL 269
           G  + L  ISTF +      ++ A+  ++  + P+L Q   I       G + +P FMS 
Sbjct: 34  GIVICLAKISTFKVLN----IIAAIYVEVIRNTPILVQIMIIYFALPEIGISFTP-FMSA 88

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  + A+++EI RSG++A+ +GQMEA  +LGL++ +  +L++LPQA+++ +P L +
Sbjct: 89  IIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPALGN 148

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++L+K SS+   VG AD++    T+ N T Q     L+   IY  ++ +++L + RL 
Sbjct: 149 EFISLVKESSIVYFVGVADIMFTANTVKNATYQTFGPYLVAAAIYFIITSILSLLVKRLE 208

Query: 390 AKI 392
            K+
Sbjct: 209 KKL 211


>gi|327460181|gb|EGF06518.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 729

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+  +F+       R          + +PL+ ++ F+ +G+P L+       
Sbjct: 537 FAIAMIIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLI------- 589

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + GQ + I        F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 590 ----ESMTGQQSPINA------FVAGTIALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 639

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L   G  II +  Q+
Sbjct: 640 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFKTGKDIIARNYQS 699

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +  ++     RL  +I
Sbjct: 700 FRMYAILAVLYLIIITLLTRLAKRLEKRI 728


>gi|291295431|ref|YP_003506829.1| polar amino acid ABC transporter inner membrane subunit
           [Meiothermus ruber DSM 1279]
 gi|290470390|gb|ADD27809.1| polar amino acid ABC transporter, inner membrane subunit
           [Meiothermus ruber DSM 1279]
          Length = 216

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 13/204 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I   S V GI+L      L+R    +    L L YI   L+ G P LV I L   + F 
Sbjct: 22  RITALSLVFGILLGTLVA-LARMSPLRWLSGLTLGYIE--LLRGTPLLVQIFL---IFFG 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L Q           EF +  IA S  ++A++AEI+R+G+ ++P+GQ EAA++LG + 
Sbjct: 76  IPQLTQQQI-------NEFAAGVIAFSINSSAYVAEILRAGIQSIPKGQREAALSLGFSP 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQA   +IPPL ++ + LLKNSSL  A+   +L   G  I  +T +  E+ 
Sbjct: 129 TQTLRYIILPQAFTRVIPPLVNEGITLLKNSSLLSAIAVVELTRAGQLISARTFKPFEMY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           L    IYL+++++++    RL  +
Sbjct: 189 LAVSLIYLTMTLVLSFVARRLERR 212


>gi|167570000|ref|ZP_02362874.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia oklahomensis C6786]
          Length = 241

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 65/96 (67%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LSCYT+AF+AE   +GL  VP GQ  AA ALGL   +  R V+LPQA+R  +
Sbjct: 107 EFVAGWVGLSCYTSAFVAEEFHAGLRGVPAGQYHAASALGLAPLQTLRFVVLPQAVRIAL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|205351950|ref|YP_002225751.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205271731|emb|CAR36564.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326626989|gb|EGE33332.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 246

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 231 SLVERKVRL 239



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 43/76 (56%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   +  GF  T  L+ +  I A ++G++ G  R   ++ ++ +  +YVE+FRN+P 
Sbjct: 18  NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPDRFLSGLGTLYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           +V  F  Y  V  +LP
Sbjct: 78  IVQFFTWYLVVPELLP 93


>gi|331702184|ref|YP_004399143.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329129527|gb|AEB74080.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 212

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 2/129 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L  Y++AFIAE VRSG+ +V  GQME A A GL+  +A R ++LPQA R +IP
Sbjct: 85  FASGTIGLILYSSAFIAETVRSGIQSVDPGQMEGARANGLSFWQAMRYIVLPQAFRYVIP 144

Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PL +Q++NL+KNSS LA   GF DL+  G  I + + Q++   L    +YL L++ ++ +
Sbjct: 145 PLGNQFINLVKNSSVLAFVAGF-DLMYQGNVIASDSLQSMSTYLCVGVLYLILTLPLSYY 203

Query: 385 MNRLNAKIA 393
           M  L  K+A
Sbjct: 204 MRYLEKKLA 212



 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 17/28 (60%), Positives = 19/28 (67%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           NK    I RVY+EVFRNIP LV+  F Y
Sbjct: 45  NKFFRVIARVYIEVFRNIPLLVITMFFY 72


>gi|90414856|ref|ZP_01222822.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90324034|gb|EAS40625.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 275

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 113/215 (52%), Gaps = 21/215 (9%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           F TL + T +   +F+ ++G+V +L   RLS       G+ L   YI   LI   P LV 
Sbjct: 77  FVTLKISTVS--LIFTLIIGLVTALL--RLSGSI---VGRGLARGYIE--LIRNTPLLVQ 127

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           I L Y +    PVLG             F +  +ALS +  A+ AEI R+GL  +P+GQ 
Sbjct: 128 IYLLYFVF--GPVLGL----------ERFTTAVLALSLFQGAYTAEIFRAGLNNIPKGQF 175

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  +LGL+     R V+LPQ +R I+PPLT++ ++L+KNSS+   +   DL + G  I+
Sbjct: 176 EACSSLGLSAIDGYRFVILPQMIRRILPPLTNETVSLVKNSSIVSIMAIFDLTTEGRNIV 235

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             T    E+      IYL +++M++ F   L  K+
Sbjct: 236 ADTAMPFEVWFTVAGIYLCVTLMLSGFAAWLEHKM 270


>gi|313887599|ref|ZP_07821282.1| putative arginine ABC transporter, permease protein ArtQ
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846477|gb|EFR33855.1| putative arginine ABC transporter, permease protein ArtQ
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 224

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 115/203 (56%), Gaps = 13/203 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +  F LG++L+L      + F+      L  +YI   ++ G P LV I + Y     K +
Sbjct: 33  ILGFTLGVILALMKISKLKIFN-----ILSSVYIE--IVRGTPMLVQIMIVY-FGLKKII 84

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             QF  +     +P F+   +++S  +AA+IAEI+RSG+ +V  GQMEAA +LGL  ++A
Sbjct: 85  PEQFTLL----TAPMFLCA-LSISLNSAAYIAEIIRSGISSVDYGQMEAARSLGLNEKQA 139

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R +++PQA+++I+P L ++++ L+K SS+   VG  +L+  G +I + T + +   +  
Sbjct: 140 MRKIIMPQAIKNILPALVNEFITLIKESSITYTVGVGELMYAGKSISSGTFELVRPFIFT 199

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IY  ++  ++  M RL  ++A
Sbjct: 200 ACIYFIMTFSLSKAMGRLERRLA 222


>gi|16759616|ref|NP_455233.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16764041|ref|NP_459656.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142611|ref|NP_805953.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56414207|ref|YP_151282.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|62179262|ref|YP_215679.1| glutamate/aspartate ABC transporter [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161615118|ref|YP_001589083.1| hypothetical protein SPAB_02886 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167550798|ref|ZP_02344554.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|167990673|ref|ZP_02571773.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168231679|ref|ZP_02656737.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168236651|ref|ZP_02661709.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168240513|ref|ZP_02665445.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168264403|ref|ZP_02686376.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168465841|ref|ZP_02699723.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168820211|ref|ZP_02832211.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194445140|ref|YP_002039907.1| glutamate/aspartate ABC transporter permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194448493|ref|YP_002044699.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194470878|ref|ZP_03076862.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194734571|ref|YP_002113775.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197251810|ref|YP_002145640.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197261867|ref|ZP_03161941.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|198242331|ref|YP_002214652.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200389956|ref|ZP_03216567.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204930566|ref|ZP_03221496.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|207856129|ref|YP_002242780.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213425079|ref|ZP_03357829.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213580533|ref|ZP_03362359.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
 gi|213609636|ref|ZP_03369462.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213647481|ref|ZP_03377534.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|224582499|ref|YP_002636297.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|238911615|ref|ZP_04655452.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|289805230|ref|ZP_06535859.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
 gi|289823920|ref|ZP_06543520.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|25296624|pir||AE0583 glutamate/aspartate transport system permease protein GltJ STY0709
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|16419177|gb|AAL19615.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501908|emb|CAD05135.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29138242|gb|AAO69813.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|56128464|gb|AAV77970.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|62126895|gb|AAX64598.1| ABC superfamily (membrane), glutamate/aspartate transporter
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364482|gb|ABX68250.1| hypothetical protein SPAB_02886 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403803|gb|ACF64025.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194406797|gb|ACF67016.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194457242|gb|EDX46081.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194710073|gb|ACF89294.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195631650|gb|EDX50170.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197215513|gb|ACH52910.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197240122|gb|EDY22742.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197290414|gb|EDY29770.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197936847|gb|ACH74180.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602401|gb|EDZ00947.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204320500|gb|EDZ05703.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205324294|gb|EDZ12133.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205330904|gb|EDZ17668.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205334014|gb|EDZ20778.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205339997|gb|EDZ26761.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205343175|gb|EDZ29939.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205347134|gb|EDZ33765.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206707932|emb|CAR32221.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224467026|gb|ACN44856.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|261245936|emb|CBG23738.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267992398|gb|ACY87283.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157264|emb|CBW16752.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|312911696|dbj|BAJ35670.1| glutamate/aspartate ABC transporter permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320084937|emb|CBY94726.1| Octopine transport system permease protein occM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321226243|gb|EFX51294.1| Glutamate Aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322613210|gb|EFY10153.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322621278|gb|EFY18135.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322623698|gb|EFY20536.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322628970|gb|EFY25749.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322631692|gb|EFY28446.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322637572|gb|EFY34274.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322641912|gb|EFY38542.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322646756|gb|EFY43262.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322651457|gb|EFY47837.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322653092|gb|EFY49426.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322658812|gb|EFY55067.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322664918|gb|EFY61111.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322668920|gb|EFY65072.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322670574|gb|EFY66707.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322675315|gb|EFY71391.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322682214|gb|EFY78239.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322684957|gb|EFY80954.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|322713728|gb|EFZ05299.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323128981|gb|ADX16411.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|323193985|gb|EFZ79187.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323197923|gb|EFZ83045.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323202030|gb|EFZ87090.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323207163|gb|EFZ92116.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323210930|gb|EFZ95793.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323214310|gb|EFZ99061.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323219285|gb|EGA03776.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323225504|gb|EGA09734.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323231063|gb|EGA15179.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323234105|gb|EGA18194.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323238200|gb|EGA22258.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323242566|gb|EGA26590.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323248457|gb|EGA32391.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323251328|gb|EGA35200.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323259256|gb|EGA42899.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323264845|gb|EGA48346.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323272318|gb|EGA55725.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326622407|gb|EGE28752.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
          Length = 246

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 231 SLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   +  GF  T  L+ +  I A ++G++ G  R   N+ ++ +  +YVE+FRN+P 
Sbjct: 18  NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGLGTLYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           +V  F  Y  V  +LP
Sbjct: 78  IVQFFTWYLVVPELLP 93


>gi|238752606|ref|ZP_04614079.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia rohdei ATCC 43380]
 gi|238709197|gb|EEQ01442.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia rohdei ATCC 43380]
          Length = 246

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A +IG+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWAGFQVTVALSLCAWVIAFLIGSLFGILRTVPNRILSGIGACYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP+         GM+  +         +D N + F+ S    I L
Sbjct: 77  LIVQFFTWYLVVPELLPV-------DIGMWFKSE--------LDPNIQFFLSSM---ICL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|317048166|ref|YP_004115814.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949783|gb|ADU69258.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 223

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 104/170 (61%), Gaps = 13/170 (7%)

Query: 225 STFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +++++F  G P LV +   + L+F  P    FN      V P F+   I L CY+AA+++
Sbjct: 58  NSYVVFVRGTPLLVQL---FILYFGLP---YFNI-----VIPAFVCGIIGLGCYSAAYVS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VR  ++++ RGQ EAA ++G++  +A RL++LPQA+  ++PPL ++++ L KNS+L  
Sbjct: 107 ELVRGAILSIDRGQSEAARSMGMSAAQAMRLIILPQALVRMVPPLANEFIALTKNSALVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            V   DL+  G  +I+ + +++E+ ++  FIYL ++    L +  +  K+
Sbjct: 167 LVTIHDLMHEGQKVISVSYRSLEVYIVIAFIYLLMTSSTMLLLRVVEKKL 216



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           +L G   T  +    ++ +  +GTL+G GRL+   KLV W+C  YV   R  P LV +F 
Sbjct: 16  LLSGAWVTIEVTLCALLISCCLGTLIGLGRLTPQRKLVWWLCNSYVVFVRGTPLLVQLFI 75

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY        +P  +IV+P
Sbjct: 76  LY------FGLPYFNIVIP 88


>gi|292558363|gb|ADE31364.1| Amino acid ABC transporter,3-TM region containing permease protein
           [Streptococcus suis GZ1]
          Length = 250

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%)

Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219
           G+  NN G  LS   +T+      F  + V+GI+  +FA       R++        + +
Sbjct: 34  GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 93

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+ ++ F+ +G+P L+           + + GQ + I       +F++  IALS  + A
Sbjct: 94  PLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLNSGA 136

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK+++
Sbjct: 137 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 196

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  A+G  +L   G  II +  Q+  +  I   IYL
Sbjct: 197 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 232


>gi|271502695|ref|YP_003335721.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270346250|gb|ACZ79015.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 248

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 48/85 (56%), Positives = 64/85 (75%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++    L+ Y+AAFIAE VR+G+  V RGQ  AA ALGLT  +A R V+LPQA+R  +
Sbjct: 116 EFLAGLFGLTLYSAAFIAEEVRAGIAGVARGQKYAACALGLTGWQAMRYVVLPQALRIAL 175

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL  QY+N++KNSSLA+A+G A+L
Sbjct: 176 PPLLGQYMNVVKNSSLAMAIGVAEL 200



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  GF  T  +A + ++ AT+ G ++ AGR S  + + W    Y  +FRN P LV
Sbjct: 19  QYLQWLWQGFQVTLGIAAATVVLATLSGLILAAGRDSGTRWLRWPVIAYCALFRNTPLLV 78

Query: 144 VIFFLYKSVLSVLP 157
            +FF Y     +LP
Sbjct: 79  QLFFWYFGAAQLLP 92


>gi|330836706|ref|YP_004411347.1| amino acid ABC transporter membrane protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329748609|gb|AEC01965.1| amino acid ABC transporter membrane protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 289

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 119/202 (58%), Gaps = 19/202 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S V+G++  L A   SR  +  +G     +Y+   LI G+P LV      QL F    
Sbjct: 103 ILSVVIGVLAGLGAVSKSRVINLISG-----VYVE--LIRGIPLLV------QLIFIYFA 149

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G+F  + G       ++  IAL     A++ EI+R+G+ A+P+GQMEAAIALGLT  +A
Sbjct: 150 VGRFINVEG------VVAAIIALGICFGAYMGEIIRAGIQAIPKGQMEAAIALGLTRTQA 203

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQ ++ ++P + ++++++LK+SSL   +  +D++  G   I++T  ++E +LI 
Sbjct: 204 FRSVILPQTIKIVLPAIGNEFISMLKDSSLVSTLALSDILRRGREYISRTFLSLETMLIV 263

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             IYL ++++++  +  L  ++
Sbjct: 264 ALIYLIITLVLSRLVGILEERL 285



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 38/66 (57%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T  + G   TF +    +I + +IG L G G +S ++++  I  VYVE+ R IP LV + 
Sbjct: 85  TVTVSGIPVTFQVTVFAIILSVVIGVLAGLGAVSKSRVINLISGVYVELIRGIPLLVQLI 144

Query: 147 FLYKSV 152
           F+Y +V
Sbjct: 145 FIYFAV 150


>gi|300811422|ref|ZP_07091918.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497657|gb|EFK32683.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 213

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 2/127 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I LS Y++AFIAE VRSG+ +V  GQME A + G+T+ +A R V+LPQA R +IP
Sbjct: 86  FQAGTIGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIP 145

Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PL +Q +NL+KNSS LA   GF DL+  G  + + T Q I   ++    YL L++ ++ +
Sbjct: 146 PLGNQLVNLIKNSSILAFVAGF-DLMYQGDIVASNTFQTIPSYVLVSLFYLVLTLPLSYY 204

Query: 385 MNRLNAK 391
           M  L  K
Sbjct: 205 MQYLEKK 211



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 32/63 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           +  L+GF NT   +   +  + IIG+         NK    + +VYVE+FRNIP LVV  
Sbjct: 10  STFLLGFWNTILCSLISLFFSLIIGSGFAILETVPNKFWRGVAKVYVEIFRNIPLLVVTM 69

Query: 147 FLY 149
             Y
Sbjct: 70  VFY 72


>gi|323262143|gb|EGA45705.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
          Length = 249

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 231 SLVERKVRL 239



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ +  I A ++G++ G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFTWYLVVPELLP 93


>gi|238853886|ref|ZP_04644249.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
 gi|238833472|gb|EEQ25746.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
          Length = 212

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 20/203 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS +LG+  +L           K G+A+  +YI  F    +P LV+  + Y       V+
Sbjct: 29  FSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYL------VV 75

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            Q  F   S     F +  I L+ YT+AFIAE VR+G+ +V  GQME A + G+T+ +A 
Sbjct: 76  PQIWFKVSS-----FAAGTIGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTYTQAM 130

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           R V+LPQA++ +IPPL +Q++NL+KNSS LA   GF DL+     I   + + I   ++ 
Sbjct: 131 RYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINTYVVV 189

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
              YL L++ ++ +M  L  K+A
Sbjct: 190 GLFYLILTLPLSYYMRHLEKKLA 212


>gi|238755069|ref|ZP_04616417.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia ruckeri ATCC 29473]
 gi|238706773|gb|EEP99142.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia ruckeri ATCC 29473]
          Length = 246

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVLINAVIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  IG+L G  R   N+ +A +   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSLCAWVIAFFIGSLFGILRTVPNRFLAAMGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP               N G+ F T  +D N + F+ S    + L
Sbjct: 77  LIVQFFTWYLVVPELLP--------------TNIGMWFKT-ELDPNIQFFLSSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|213419684|ref|ZP_03352750.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
          Length = 142

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 7   FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 66

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 67  PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 126

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 127 SLVERKVRL 135


>gi|254245481|ref|ZP_04938802.1| Glutamate/aspartate transport system permease protein [Burkholderia
           cenocepacia PC184]
 gi|124870257|gb|EAY61973.1| Glutamate/aspartate transport system permease protein [Burkholderia
           cenocepacia PC184]
          Length = 265

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 131 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 190

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T Q
Sbjct: 191 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQ 228


>gi|42518677|ref|NP_964607.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii NCC 533]
 gi|41582963|gb|AAS08573.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii NCC 533]
 gi|329666942|gb|AEB92890.1| Glutamine transport system permease protein [Lactobacillus
           johnsonii DPC 6026]
          Length = 212

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 28/207 (13%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFD 247
           FS +LG+  +L           K G+A+  +YI  F    +P LV+  + Y    Q+ F 
Sbjct: 29  FSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYLVVPQIWFK 81

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   F  G+          I L+ YT+AFIAE VR+G+ +V  GQME A + G+T+
Sbjct: 82  VS-----GFAAGT----------IGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTY 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEI 366
            +A R V+LPQA++ +IPPL +Q++NL+KNSS LA   GF DL+     I   + + I  
Sbjct: 127 TQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINT 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++    YL L++ ++ +M  L  K+A
Sbjct: 186 YVVVGLFYLVLTLPLSYYMRHLEKKLA 212


>gi|253990627|ref|YP_003041983.1| glutamate/aspartate transport system permease protein gltj
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782077|emb|CAQ85241.1| glutamate/aspartate transport system permease protein gltj
           [Photorhabdus asymbiotica]
          Length = 246

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FISSTVCLGLFTAARMCEQVRAAIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y++++++I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYITINLVIMLAM 230

Query: 386 NRLNAKIAL 394
           + L  K+ L
Sbjct: 231 HLLEKKVRL 239



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   ++ GF  T  L+    I A I G+L G  R   NK+++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWLIAGFQVTIALSICAWIIAFIAGSLFGILRTVPNKILSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFIWYLVVPELLP 93


>gi|51244842|ref|YP_064726.1| glutamine ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50875879|emb|CAG35719.1| related to glutamine ABC transporter, permease protein
           [Desulfotalea psychrophila LSv54]
          Length = 336

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 8/177 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           K   ++YI   LI G P +V I L Y +  +     L Q   IGG  V P +  + IAL+
Sbjct: 163 KWFSIIYIE--LIRGTPLMVQIFLWYFVVGNLINAFLTQIG-IGG--VPPLWFGV-IALA 216

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +T A+ AEIVR+G+ +V RGQMEAA +LGLT+ ++ R V+LPQA+R I+PPL  Q+++L
Sbjct: 217 TFTGAYTAEIVRAGIQSVHRGQMEAARSLGLTYAESMRKVILPQALRRIMPPLAGQFISL 276

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +K+SSL   +   ++      I++ +    E+ +    +YL L+  ++L +  L  K
Sbjct: 277 IKDSSLLGVIAIREVTKATREIVSSSLMPYEMWITCALLYLVLTFALSLCVQHLERK 333


>gi|107022691|ref|YP_621018.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116689640|ref|YP_835263.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105892880|gb|ABF76045.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647729|gb|ABK08370.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 240

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T Q
Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQ 203


>gi|227890383|ref|ZP_04008188.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849197|gb|EEJ59283.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 212

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 28/207 (13%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFD 247
           FS +LG+  +L           K G+A+  +YI  F    +P LV+  + Y    Q+ F 
Sbjct: 29  FSLILGVGFALLVVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYLIVPQIWFK 81

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   F  G+          I L+ YT+AFIAE VR+G+ +V  GQME A + G+T+
Sbjct: 82  VS-----GFAAGT----------IGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTY 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEI 366
            +A R V+LPQA++ +IPPL +Q++NL+KNSS LA   GF DL+     I   + + I  
Sbjct: 127 TQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINT 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++    YL L++ ++ +M  L  K+A
Sbjct: 186 YVVVGLFYLVLTLPLSYYMRHLEKKLA 212


>gi|83719898|ref|YP_442970.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis E264]
 gi|167620110|ref|ZP_02388741.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis Bt4]
 gi|83653723|gb|ABC37786.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis E264]
          Length = 241

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 87/149 (58%), Gaps = 18/149 (12%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-----FIGGSTV---SPEFMSLYI 271
           PL+    F  FG+ +L+           +PV+   N      +GG  +   S EF++ ++
Sbjct: 64  PLVVQLLFWYFGVASLL----------PEPVMAWLNTRRAAVVGGVELHWPSFEFVAGWV 113

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS YT+AF+AE  ++GL  VP GQ  AA ALGL+ R+  R V+LPQA+R  +PPL  QY
Sbjct: 114 GLSGYTSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQY 173

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +NL+KNSSL +A+G A+L      +  +T
Sbjct: 174 MNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|242309543|ref|ZP_04808698.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
 gi|239524114|gb|EEQ63980.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
          Length = 237

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 124/226 (54%), Gaps = 22/226 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL----PL---LYIST 226
            GL F   ++ T A   +   VLG+V++L   +L+  +  +  +AL    PL    Y   
Sbjct: 23  EGLIF---SISTTALAAIIGIVLGVVVALM--QLTNFYPFRNIQALANFNPLSKIAYAYV 77

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++I G P +V      QL     +     FIG     P  +   IA    ++A++AEI+R
Sbjct: 78  YIIRGTPAVV------QLM----IWANIIFIGALRDMPILLIAAIAFGINSSAYVAEIIR 127

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ +GQMEAA ALG+ +  + + +++PQA++ I+PPL S+++ LLK +S+   +G 
Sbjct: 128 AGIQSLDKGQMEAARALGMGYAMSMKEIIIPQAIKRILPPLVSEFIALLKETSIVGFIGG 187

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            DL+     I +QT +AIE +L    IYL L+ + A+ M ++  ++
Sbjct: 188 VDLLRSASIITSQTYRAIEPLLAVGIIYLILTSLFAMLMRKVEKRL 233


>gi|170732942|ref|YP_001764889.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169816184|gb|ACA90767.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 240

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T Q
Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQ 203


>gi|319939264|ref|ZP_08013627.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV]
 gi|319811660|gb|EFW07936.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV]
          Length = 727

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 535 FAIAMVIGIIFGMFSVSPVKTLRVISEIFVDVIRGIPLMILAAFIFWGIPNLIESMTGHQ 594

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +       +F+ G+          IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 595 SPIN-------DFVAGT----------IALSLNAGAYIAEIVRGGIQAVPVGQMEASRSL 637

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 638 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 697

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 698 FKMYAILAVFYLIIITLLTRLAKRLEKRI 726


>gi|268319111|ref|YP_003292767.1| ABC-type amino acid transport system, permease component
           [Lactobacillus johnsonii FI9785]
 gi|262397486|emb|CAX66500.1| ABC-type amino acid transport system, permease component
           [Lactobacillus johnsonii FI9785]
          Length = 212

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 28/207 (13%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFD 247
           FS +LG+  +L           K G+A+  +YI  F    +P LV+  + Y    Q+ F 
Sbjct: 29  FSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYLIVPQIWFK 81

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   F  G+          I L+ YT+AFIAE VR+G+ +V  GQME A + G+T+
Sbjct: 82  VS-----GFAAGT----------IGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTY 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEI 366
            +A R V+LPQA++ +IPPL +Q++NL+KNSS LA   GF DL+     I   + + I  
Sbjct: 127 TQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINT 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++    YL L++ ++ +M  L  K+A
Sbjct: 186 YVVVGLFYLVLTLPLSYYMRHLEKKLA 212


>gi|148993850|ref|ZP_01823252.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|168489068|ref|ZP_02713267.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|147927675|gb|EDK78700.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|183572432|gb|EDT92960.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|332073579|gb|EGI84058.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
          Length = 721

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQ+ + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQSTKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|332074851|gb|EGI85323.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 721

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 111/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+   F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGTFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|268590403|ref|ZP_06124624.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
 gi|291314317|gb|EFE54770.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
          Length = 246

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+P
Sbjct: 111 FISSMLCLGLFTAARMTEQVRAAIQSLPRGQKSAALAMGLTLPQTYRYVLLPNAYRVILP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++++I + M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVGINVIIMILM 230

Query: 386 NRLNAKIAL 394
             L  K+ L
Sbjct: 231 TLLERKVRL 239



 Score = 39.7 bits (91), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 20/153 (13%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   ++ G   T  L+    I A ++G+  G  R   N+ +A++   YVE+FRN+P
Sbjct: 17  GNTTYLGWLISGLEVTVTLSICAWIIAFLVGSFFGILRTVPNRFLAFLGTAYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  +  +LP    SI   F M             +D N + F+ S    + L
Sbjct: 77  LIVQFFTWYLVIPELLP---RSIGDWFKM------------DLDPNYQFFISSM---LCL 118

Query: 201 SLF-ATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            LF A R++        ++LP    S  L  GL
Sbjct: 119 GLFTAARMTEQVRAAI-QSLPRGQKSAALAMGL 150


>gi|283784425|ref|YP_003364290.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
 gi|282947879|emb|CBG87441.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
          Length = 246

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ +  I A ++G+L G  R   N+ ++ I  +YVE+FRN+P
Sbjct: 17  GNTTYLGWLWNGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSGIGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFTWYLVVPELLP 93


>gi|329296084|ref|ZP_08253420.1| glutamate/aspartate transport system permease protein gltJ [Plautia
           stali symbiont]
          Length = 246

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VL P A R I+P
Sbjct: 111 FLSSTICLGLFTAAHVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLPPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  DL +  G +++ +  A E        Y+ ++++I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDLAAQAGKLLDYSAHAYESFTAITLAYVGINLVIMLIM 230

Query: 386 NRLNAKIAL 394
           + +  KI L
Sbjct: 231 SLVERKIRL 239



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 69  GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G + + GI     P+  +++Y   +  GF  T  ++    I A ++G+  G  R   N+ 
Sbjct: 2   GIDWNWGIFLQQAPF-GNTTYLGWLWSGFQVTVAVSCCAWIIAFLVGSFFGILRTVPNRW 60

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           ++ I   YVE+FRNIP +V  FF Y
Sbjct: 61  LSTIGTCYVELFRNIPLIVQFFFWY 85


>gi|242241398|ref|YP_002989579.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133455|gb|ACS87757.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 246

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 4/141 (2%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    F  FG   L+   L   L+    +L  F+F+  S  S EF++    L+ Y+AA
Sbjct: 73  PLLVQLFFWYFGAGQLLPECLMQWLNTPHTLL--FSFL--SWPSFEFLAGLFGLTLYSAA 128

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FI+E VR+G+  V  GQ  AA ALGLTH +A R V+LPQA++  +PPL  QY+N++KNSS
Sbjct: 129 FISEEVRAGIAGVAGGQKYAACALGLTHWQAMRYVVLPQALKIALPPLLGQYMNIIKNSS 188

Query: 340 LAVAVGFADLVSVGGTIINQT 360
           L +A+G A+L      +  +T
Sbjct: 189 LTMAIGVAELSYASRQVETET 209


>gi|225868288|ref|YP_002744236.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225701564|emb|CAW98789.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 721

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 108/211 (51%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GIV  + A   S      +       + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 529 FAIALVIGIVFGMMAVSPSSSLRTVSTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 588

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 589 -------------------SPINDFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 629

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL++    R ++LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 630 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 689

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 690 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 720


>gi|290476188|ref|YP_003469088.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus
           bovienii SS-2004]
 gi|289175521|emb|CBJ82324.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Xenorhabdus bovienii SS-2004]
          Length = 246

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA I E VR+ + ++PRGQ  A  A+GLT  +  R VLLP A R IIP
Sbjct: 111 FISSVICLGLFTAARICEQVRAAIQSLPRGQKAAGQAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++++I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINLVIMLAM 230

Query: 386 NRLNAKIAL 394
             L  K+ L
Sbjct: 231 TLLEKKVRL 239



 Score = 42.7 bits (99), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   ++ GF  T  L+    + A  +G+L G  R   NK +A +   YVE+FRNIP
Sbjct: 17  GNTTYLGWLISGFQVTVALSVCAWVIALAVGSLFGILRTVPNKFLATLGACYVELFRNIP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V   LP
Sbjct: 77  LIVQFFIWYLVVPEFLP 93


>gi|157150220|ref|YP_001450326.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|157075014|gb|ABV09697.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 485

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+      Q
Sbjct: 293 FAIALVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGVPLMILAAFIFWGIPNLIESITNQQ 352

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +       +F+ G+          IALS  + A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 353 TPIN-------DFVAGT----------IALSLNSGAYIAEIVRGGIQAVPAGQMEASRSL 395

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 396 GISYSKTMRKIILPQATKIMLPNFVNQFVITLKDTTIVSAIGLVELFQTGKNIIARNYQS 455

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +   +     RL  +I
Sbjct: 456 FRMYAILAVLYLLIITFLTRLAKRLEKRI 484


>gi|50120251|ref|YP_049418.1| glutamate/aspartate transport system permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610777|emb|CAG74222.1| glutamate/aspartate transport system permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 224

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+I+V RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIISVSRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   FIY   SI  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFLFSITASML 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  +  + ++   I GT++   RLS  K ++W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVVTLKITLTAVVFGIIWGTILAVMRLSPIKAISWFAKLYVNLFRSVPLVMVLLWFYLV 78

Query: 152 VLSVL 156
           V S+L
Sbjct: 79  VPSLL 83


>gi|238019429|ref|ZP_04599855.1| hypothetical protein VEIDISOL_01298 [Veillonella dispar ATCC 17748]
 gi|237864128|gb|EEP65418.1| hypothetical protein VEIDISOL_01298 [Veillonella dispar ATCC 17748]
          Length = 218

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 10/168 (5%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV I L Y   F  P+      I G  + P F++   A S  + A+++EI R+
Sbjct: 61  IIRGTPLLVQIFLIY---FALPM------ITGQRIDP-FIAAVTACSINSGAYVSEIFRA 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQMEA  +LGLT  +  R +++PQA ++IIPPL ++++ +LK+SSL   +GF 
Sbjct: 111 GIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFE 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L   G  II +T  + EI      IYL +++ I+  +  L  K ++K
Sbjct: 171 ELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218


>gi|257139194|ref|ZP_05587456.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis E264]
          Length = 274

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/149 (39%), Positives = 87/149 (58%), Gaps = 18/149 (12%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-----FIGGSTV---SPEFMSLYI 271
           PL+    F  FG+ +L+           +PV+   N      +GG  +   S EF++ ++
Sbjct: 97  PLVVQLLFWYFGVASLL----------PEPVMAWLNTRRAAVVGGVELHWPSFEFVAGWV 146

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS YT+AF+AE  ++GL  VP GQ  AA ALGL+ R+  R V+LPQA+R  +PPL  QY
Sbjct: 147 GLSGYTSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQY 206

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +NL+KNSSL +A+G A+L      +  +T
Sbjct: 207 MNLIKNSSLTMAIGVAELSYASRQVETET 235


>gi|313680185|ref|YP_004057924.1| amino acid ABC transporter membrane protein, paat family
           [Oceanithermus profundus DSM 14977]
 gi|313152900|gb|ADR36751.1| amino acid ABC transporter membrane protein, PAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 275

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 18/225 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFA--TRLSR--------HFHEKTGKALPLLYISTFLIF 230
           L  +   K+ V S V G+ L LFA   RLS+         F+    +  PLL    F   
Sbjct: 55  LGAEVTIKLTVISSVTGLFLGLFAGIARLSKNPLFRWPAQFYVWVIRGTPLLVQILFAYN 114

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LP L+  A KY      P +          V   + + +IALS    A+ AE++R+G+ 
Sbjct: 115 ALPFLLEPAWKYLQPLGAPPI--------QDVLTPYWAAFIALSVNVGAYNAEVIRAGIQ 166

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +GQ EAA++LG+   +  R +++PQA++ ++PPL +  + LLK+SSLA  +   +LV
Sbjct: 167 AIAKGQWEAAMSLGMRPFQVMRYIIVPQAIKIVVPPLVNNVIALLKDSSLASVITLLELV 226

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             G  +I+ T + +E+ +    IYL L+ ++  F + L  ++A +
Sbjct: 227 HQGQRMISITFRPVEVYVAVAAIYLILTTVLTFFTDWLEREMARR 271


>gi|304386275|ref|ZP_07368608.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|304327632|gb|EFL94859.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 216

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 32/207 (15%)

Query: 192 FSFVLG---IVLSLFATRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           FS V+G    ++ +  +RL+R     + +  + +PLL ++ F    +P  V         
Sbjct: 29  FSLVIGSLFAIMEVLPSRLARTIGRIYVEVVRNIPLLVVTMFFYIVIPRYV--------- 79

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P +    F  G+          I L+ YT+AFIAE VR+G+ +V  GQMEAA + G+
Sbjct: 80  ---PAVN--GFTAGT----------IGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGM 124

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAI 364
           T  +A R ++LPQA + +IPPL +Q++NL+KNSS LA   GF DL+ VG  I + T   I
Sbjct: 125 TFSQAMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGF-DLMYVGNDIASTTFDTI 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              L+   +YL +++ ++ +M  L  +
Sbjct: 184 NSYLVVGVLYLIITMPLSYYMRYLEKR 210



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++++  +  G   T   +   +  + +IG+L     +  ++L   I R+YVEV RNIP L
Sbjct: 6   TNHSAELFSGLGQTLLCSLIALFFSLVIGSLFAIMEVLPSRLARTIGRIYVEVVRNIPLL 65

Query: 143 VVIFFLY 149
           VV  F Y
Sbjct: 66  VVTMFFY 72


>gi|312792975|ref|YP_004025898.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180115|gb|ADQ40285.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 220

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 116/226 (51%), Gaps = 32/226 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232
           +T++  A       V G+V +LF  R+S+         F+    +  PLL    F+ +GL
Sbjct: 19  VTIELTAIAVTIGLVFGLVAALF--RISKIKVLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V            P L            P F++  IAL   + A+ AEI+R+ ++++
Sbjct: 77  PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+  
Sbjct: 115 DRGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                + TG+  EI +  + IYL+L+ + +   N L  ++   E++
Sbjct: 175 AQLKASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220


>gi|116334343|ref|YP_795870.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099690|gb|ABJ64839.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 212

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 18/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS ++G   +L     S     K G+ +  +YI  F    +P LV I + + + F   V
Sbjct: 28  IFSLIIGTFFALLEESPS-----KFGRGVARVYIEIFR--NIPLLV-ITMFFYVVFPLYV 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G+          I L+ YT+AFIAE VR+G+ +V  GQME A A GL+  +A
Sbjct: 80  IKMNGFTAGT----------IGLTLYTSAFIAETVRAGIQSVDPGQMEGARANGLSFWQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA R +IPPL +Q++NL+KNSS    VG  DL+  G  I + + + I      
Sbjct: 130 MRYIVLPQAFRYVIPPLGNQFVNLVKNSSTLAFVGGFDLMYQGNVIASSSLETIAAYSAV 189

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             +YL +++ I+ +M  L  ++A
Sbjct: 190 GVLYLVITMPISYYMRYLEKRLA 212



 Score = 43.5 bits (101), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y   +L G   T   +   +I + IIGT       S +K    + RVY+E+FRNIP L
Sbjct: 6   QTYGGTLLYGLGQTLLCSLLALIFSLIIGTFFALLEESPSKFGRGVARVYIEIFRNIPLL 65

Query: 143 VVIFFLY 149
           V+  F Y
Sbjct: 66  VITMFFY 72


>gi|254384681|ref|ZP_05000020.1| permease [Streptomyces sp. Mg1]
 gi|194343565|gb|EDX24531.1| permease [Streptomyces sp. Mg1]
          Length = 316

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 105/194 (54%), Gaps = 9/194 (4%)

Query: 189 IFVFSFVLGIVLSL-FAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLV--LIALKYQL 244
           I V S  LG++L + FA  RLS++    TG A+  LYI  +   G P  V  L+     L
Sbjct: 84  ISVSSMALGLLLGIVFAVMRLSKN--PVTG-AVSWLYI--WFFRGTPVYVQLLVWFNLSL 138

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F    LG         V   FM   + L     A++AEIVR+G+ +V  GQ EAA ALG
Sbjct: 139 IFQYINLGPIYKNETVDVMTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEAAHALG 198

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   K  R ++LPQAMR IIPP  ++++N+LK SSL  AV + +L+     I N  G  +
Sbjct: 199 MPQTKTMRRIVLPQAMRVIIPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGNTAGAIM 258

Query: 365 EIILIWMFIYLSLS 378
           E++ +  F YL+L+
Sbjct: 259 EMLFVASFWYLALT 272


>gi|313893707|ref|ZP_07827274.1| glutamine ABC transporter, permease protein GlnP [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441721|gb|EFR60146.1| glutamine ABC transporter, permease protein GlnP [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 218

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 98/168 (58%), Gaps = 10/168 (5%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV I L Y   F  P+      I G  + P F++   A S  + A+++EI R+
Sbjct: 61  IIRGTPLLVQIFLIY---FALPM------ITGQRIDP-FIAAVTACSINSGAYVSEIFRA 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQMEA  +LGLT  +  R +++PQA ++IIPPL ++++ +LK+SSL   +GF 
Sbjct: 111 GIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFE 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L   G  II +T  + EI      IYL +++ I+  +  L  K ++K
Sbjct: 171 ELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218


>gi|225573416|ref|ZP_03782171.1| hypothetical protein RUMHYD_01608 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039226|gb|EEG49472.1| hypothetical protein RUMHYD_01608 [Blautia hydrogenotrophica DSM
           10507]
          Length = 213

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 79/131 (60%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  FM+ ++AL+ Y  A+++E+VR GL A+PRGQMEA  +LGL   +    + LPQ M+ 
Sbjct: 71  SSAFMTAFVALTLYHGAYVSEVVRGGLTAIPRGQMEAGKSLGLGFVRIMFSIYLPQIMKQ 130

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           IIP L  QY+ ++K+++L   VG  DL+     ++  T + +EI LI   IY  +  +I 
Sbjct: 131 IIPTLCGQYILVVKDTTLVSVVGLQDLMWNAKELMAVTYKPMEIYLIVGLIYFVICWVID 190

Query: 383 LFMNRLNAKIA 393
           +  NR+  K+ 
Sbjct: 191 IIANRVENKVT 201



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 31/57 (54%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           TF L    ++   I+G LVG  R     +V+ I  +YV   R IPPLVV+  LY +V
Sbjct: 12  TFKLVPCVVVSTLIVGILVGVVRFRKIPVVSQIIDLYVTAMRGIPPLVVLMMLYFTV 68


>gi|206560033|ref|YP_002230797.1| putative amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
 gi|198036074|emb|CAR51968.1| putative amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 247

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/98 (50%), Positives = 68/98 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 113 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T Q
Sbjct: 173 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFQ 210


>gi|238791650|ref|ZP_04635288.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia intermedia ATCC 29909]
 gi|238729266|gb|EEQ20782.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia intermedia ATCC 29909]
          Length = 246

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  V  +LP+
Sbjct: 77  LIVQFFTWYLVVPELLPV 94


>gi|323496903|ref|ZP_08101931.1| ABC-type amino acid transport system permease component [Vibrio
           sinaloensis DSM 21326]
 gi|323317977|gb|EGA70960.1| ABC-type amino acid transport system permease component [Vibrio
           sinaloensis DSM 21326]
          Length = 246

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 29/210 (13%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F+  LG+V++L A       +L    + +  +++P+L +  ++ +G+PTL+ ++L +  
Sbjct: 57  LFAMTLGLVIALLALAKSPFLQLLNRIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LG
Sbjct: 115 ---------------------FWAGVIALTVAESAFMAEVFRGGIQAISRGQHEAAESLG 153

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      +
Sbjct: 154 LNYWQKMRLVILPQAFRHILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           EI    +  YL L ++++  +  L  +IA+
Sbjct: 214 EIYTFLVVEYLVLILLVSHAVRWLEKRIAI 243



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 42/70 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF +T  ++   M+ A  +G ++    L+ +  +  + R+YVEV R+IP LV++ ++
Sbjct: 41  LLAGFNDTIQVSLLSMLFAMTLGLVIALLALAKSPFLQLLNRIYVEVIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 101 YYGMPTLLDV 110


>gi|156934834|ref|YP_001438750.1| hypothetical protein ESA_02682 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533088|gb|ABU77914.1| hypothetical protein ESA_02682 [Cronobacter sakazakii ATCC BAA-894]
          Length = 246

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           N +  K+ L
Sbjct: 231 NLVERKVRL 239



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ S  I A ++G+L G  R   N+ ++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTVALSISAWIIAFLVGSLFGILRTVPNRFLSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP               N G+ F    +D N + F+ S    I L
Sbjct: 77  LIVQFFTWYLVVPELLP--------------ENLGMWFKA-ELDPNVQFFLSSM---ICL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|288905601|ref|YP_003430823.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus UCN34]
 gi|288732327|emb|CBI13897.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Streptococcus gallolyticus UCN34]
          Length = 741

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 113/209 (54%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  + A   ++     +       + +PL+ ++ F+ +G+P L+       
Sbjct: 549 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWGIPNLL------- 601

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + G+ + I       +F++  IALS    A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 602 ----ESITGKQSPIN------DFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSL 651

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 652 GISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 711

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   IYL +  ++     RL  ++
Sbjct: 712 FRMYAILAVIYLVMITLLTRLAKRLEKRL 740


>gi|171318959|ref|ZP_02908089.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171095844|gb|EDT40788.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 240

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201


>gi|227509838|ref|ZP_03939887.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227512775|ref|ZP_03942824.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227522899|ref|ZP_03952948.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227083975|gb|EEI19287.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227089928|gb|EEI25240.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227190762|gb|EEI70829.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 212

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 84/129 (65%), Gaps = 2/129 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  + L+ Y++AFIAE VRSG+ +V  GQME A + GL++ ++ R ++LPQA R +IP
Sbjct: 85  FASGTVGLTLYSSAFIAETVRSGIQSVDPGQMEGARSTGLSYWQSMRYIILPQAFRYVIP 144

Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PL +Q++NL+KNSS LA   GF DL+     I + + Q++   +    +YL L++ ++ +
Sbjct: 145 PLGNQFINLVKNSSVLAFVAGF-DLMYQANVIASDSLQSMSTYMCVGVLYLILTLPLSYY 203

Query: 385 MNRLNAKIA 393
           M  L  K+A
Sbjct: 204 MRHLEKKLA 212



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 16/28 (57%), Positives = 19/28 (67%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           NK    + RVY+EVFRNIP LV+  F Y
Sbjct: 45  NKFARVVARVYIEVFRNIPLLVITMFFY 72


>gi|306833827|ref|ZP_07466952.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424021|gb|EFM27162.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 739

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  + A   ++     +       + +PL+ ++ F+ +G+P L+       
Sbjct: 547 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWGIPNLL------- 599

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + G+ + I       +F++  IALS    A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 600 ----ESITGRQSPIN------DFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSL 649

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  + ++LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 650 GISYGKTMQKIILPQAIRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 709

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   IYL +  ++     RL  ++
Sbjct: 710 FRVYAILAVIYLVMITLLTRLAKRLEKRL 738


>gi|186477320|ref|YP_001858790.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193779|gb|ACC71744.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 246

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L  +TAA + E VRSG+ A+PRGQ  A +ALG T  +  R VLLP A R I+P
Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPRGQRGAGLALGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     YL +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTVAYLLINLIVMTLM 230

Query: 386 NRLNAK 391
             + AK
Sbjct: 231 RIVEAK 236



 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L G   T  ++ S  + A I+G+L G  R   NK +A I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIGTVYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  +  +LP+
Sbjct: 78  LIVQFFIWYLVIPELLPV 95


>gi|330863399|emb|CBX73521.1| glutamate/aspartate transport system permease protein gltJ
           [Yersinia enterocolitica W22703]
          Length = 263

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 128 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 187

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 188 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 247

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 248 RIVEKKVQL 256



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 34  GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSIGACYVELFRNVP 93

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 94  LIVQFFTWYLVVPELLP 110


>gi|238762871|ref|ZP_04623839.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia kristensenii ATCC 33638]
 gi|238698882|gb|EEP91631.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia kristensenii ATCC 33638]
          Length = 246

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSTIGATYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFTWYLVVPELLP 93


>gi|170702189|ref|ZP_02893095.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170132898|gb|EDT01320.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 240

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201


>gi|325978626|ref|YP_004288342.1| amino acid ABC transporter amino acid-binding/permease
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178554|emb|CBZ48598.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 745

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  + A   ++     +       + +PL+ ++ F+ +G+P L+       
Sbjct: 553 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWGIPNLL------- 605

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + G+ + I       +F++  IALS    A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 606 ----ESITGKQSPIN------DFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSL 655

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  + ++LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 656 GISYSKTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 715

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   IYL +  ++     RL  ++
Sbjct: 716 FRMYAILAVIYLVMITLLTRLAKRLEKRL 744


>gi|238758026|ref|ZP_04619207.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia aldovae ATCC 35236]
 gi|238703780|gb|EEP96316.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia aldovae ATCC 35236]
          Length = 246

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N+L++ I   YVE+FRN+P
Sbjct: 17  GNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRLLSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  +  +LP+
Sbjct: 77  LIVQFFTWYLVIPELLPV 94


>gi|78066233|ref|YP_369002.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77966978|gb|ABB08358.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 240

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201


>gi|116629193|ref|YP_814365.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri ATCC 33323]
 gi|282851028|ref|ZP_06260402.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|300362121|ref|ZP_07058298.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|311111029|ref|ZP_07712426.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus gasseri MV-22]
 gi|116094775|gb|ABJ59927.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Lactobacillus gasseri ATCC 33323]
 gi|282557980|gb|EFB63568.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|300354740|gb|EFJ70611.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|311066183|gb|EFQ46523.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus gasseri MV-22]
          Length = 212

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 28/207 (13%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFD 247
           FS +LG+  +L           K G+A+  +YI  F    +P LV+  + Y    Q+ F 
Sbjct: 29  FSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFR--NIPLLVITMIFYLVVPQIWFK 81

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   F  G+          I L+ YT+AFIAE VR+G+ +V  GQME A + G+T+
Sbjct: 82  VS-----GFAAGT----------IGLTLYTSAFIAETVRAGINSVGDGQMEGARSNGMTY 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEI 366
            +A R V+LPQA++ +IPPL +Q++NL+KNSS LA   GF DL+     I   + + I  
Sbjct: 127 TQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGF-DLMYQADVIAFSSFETINT 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++    YL L++ ++ +M  L  K+A
Sbjct: 186 YVVVGLFYLILTLPLSYYMRHLEKKLA 212


>gi|268592305|ref|ZP_06126526.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
 gi|291312086|gb|EFE52539.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
          Length = 250

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 70/98 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ YT  FIAE +R+G+  V +GQ  AA ALGLT  +A +LV+LPQA++  +
Sbjct: 118 EFLAGFIGLTLYTVPFIAEEIRAGIRGVRQGQKYAAFALGLTSWQAMKLVVLPQAVKIAM 177

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PPL  QY+N++KNSSL +A+G A+L  V   + +QT Q
Sbjct: 178 PPLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQTLQ 215



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 40/66 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ AT++G +V + + S   LV W   +Y+ +FRN P LV +FF Y +
Sbjct: 27  GFLITIWISICTIVAATVLGFIVASAKDSQITLVRWAVSIYISIFRNTPLLVQLFFWYFA 86

Query: 152 VLSVLP 157
              +LP
Sbjct: 87  SGEILP 92


>gi|315640805|ref|ZP_07895905.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483417|gb|EFU73913.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 215

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE VRSG+  V  GQMEA ++ G T+ +  R ++LPQA + +IPPL  Q
Sbjct: 90  IGLTIYTSAFIAETVRSGIQTVHSGQMEAGLSSGFTYWQTMRYIVLPQAFKIVIPPLGGQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+KNSS+   V   D++  G  I + T    +  +I    YL L++ ++ +M+ L  
Sbjct: 150 FINLIKNSSILAMVAGLDIMYQGDLIASTTFNTFDTYIIVGIFYLILTLPLSYYMSYLEK 209

Query: 391 KIALKE 396
           K A++ 
Sbjct: 210 KWAVRS 215



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 38/64 (59%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A+  + GF  T   +F  +I + IIGTL+   +LS N ++  + + YVE FRN+P L+++
Sbjct: 9   ASLFIDGFKYTILASFIALIASLIIGTLMAILQLSKNNVIRRLAKAYVEFFRNVPLLIIV 68

Query: 146 FFLY 149
              Y
Sbjct: 69  MIFY 72


>gi|123443207|ref|YP_001007181.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090168|emb|CAL13031.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 246

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSIGACYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFTWYLVVPELLP 93


>gi|153833012|ref|ZP_01985679.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01]
 gi|148870733|gb|EDL69639.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01]
          Length = 265

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 19/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     +    +T+  +A    F+ V+G+V +L   RLS   + K G 
Sbjct: 43  VPDYIAFYEDGEWWPAELIEGLIVTLKISAISLFFTLVIGLVTALL--RLS---NSKVGN 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+   Y+   LI   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 98  AIGTTYVE--LIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R+GL ++P+GQ EAA +LGL+   A + V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAKSLGLSPLFAYKDVILPQVLQRTLPPLTNEVVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SS+   +   DL +    I+++T    EI      IYL+L++ ++     L  K+    +
Sbjct: 204 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263

Query: 398 K 398
           K
Sbjct: 264 K 264


>gi|91780725|ref|YP_555932.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693385|gb|ABE36582.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 221

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 19/213 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIA 239
           LT+   A     + V+G+V+ +   R+S    +   K +  +Y+  F     PTLV LI 
Sbjct: 23  LTLAVTAVSLAVAIVIGLVIGIM--RISS---KGVLKRVAGVYVEVFR--NTPTLVQLIW 75

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + Y L    PVL   N       SP    ++ ALS  +AA++AEI R+G+ AVP GQ+EA
Sbjct: 76  VYYCL----PVLTGINL------SPTSSCIF-ALSINSAAYVAEIFRAGIQAVPSGQLEA 124

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G+++ KA R ++LPQA+R +IPP  +++++LLK SSL   +G ADL     T+   
Sbjct: 125 ARSIGMSYSKAMRKIILPQAVRQMIPPFVNEFVSLLKYSSLVSVLGVADLTYQAQTLSTT 184

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T + IEI      +Y  L   I+   + L  KI
Sbjct: 185 TFRPIEIFTFIGVVYFLLCWAISAAAHVLEQKI 217



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/43 (41%), Positives = 29/43 (67%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           A +IG ++G  R+S+  ++  +  VYVEVFRN P LV + ++Y
Sbjct: 35  AIVIGLVIGIMRISSKGVLKRVAGVYVEVFRNTPTLVQLIWVY 77


>gi|172060590|ref|YP_001808242.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171993107|gb|ACB64026.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 240

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201


>gi|270290756|ref|ZP_06196980.1| glutamine transport system permease [Pediococcus acidilactici 7_4]
 gi|270280816|gb|EFA26650.1| glutamine transport system permease [Pediococcus acidilactici 7_4]
          Length = 216

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 81/122 (66%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE VR+G+ +V  GQMEAA + G+T  +A R ++LPQA + +IPPL +Q
Sbjct: 90  IGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGMTFSQAMRYIVLPQAFKIVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+ VG  I + T   I   L+   +YL +++ ++ +M  L 
Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYVGNDIASTTFDTINSYLVVGVLYLIITMPLSYYMRYLE 208

Query: 390 AK 391
            +
Sbjct: 209 KR 210



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 38/75 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++++  +  G   T   +   +  + +IG+L     +  ++L   I R+YVEV RNIP L
Sbjct: 6   TNHSAELFSGLGQTLLCSLIALFFSLVIGSLFAIMEVLPSRLARTIGRIYVEVVRNIPLL 65

Query: 143 VVIFFLYKSVLSVLP 157
           VV  F Y  +   +P
Sbjct: 66  VVTMFFYIVIPRYIP 80


>gi|78044176|ref|YP_359363.1| glutamine ABC transporter permease [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996291|gb|ABB15190.1| glutamine ABC transporter, permease protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 228

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 10/197 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V +  LG ++ LFA  L R       K +  +Y+    I G P LV I   + +++ 
Sbjct: 24  KITVIAVTLGSIIGLFAG-LMRIARNPLLKFIARVYVD--FIRGTPLLVQI---FIIYYG 77

Query: 248 KPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            P L      GG    +SP + +   + S  + A++AEI R+G+ ++ RGQMEAA +LG+
Sbjct: 78  FPQLWA-ALTGGQPHAISP-WAAAIASTSINSGAYVAEIFRAGIQSIDRGQMEAARSLGM 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +A R V+LPQA + +IPPL ++++ +LK++SL   +GF +L   G  II    +A E
Sbjct: 136 TYGQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGFEELARRGALIIGYNARAFE 195

Query: 366 IILIWMFIYLSLSIMIA 382
           +      +YL ++++I+
Sbjct: 196 VWFAVAILYLIMTLLIS 212



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 26/43 (60%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            +IIG   G  R++ N L+ +I RVYV+  R  P LV IF +Y
Sbjct: 33  GSIIGLFAGLMRIARNPLLKFIARVYVDFIRGTPLLVQIFIIY 75


>gi|306831687|ref|ZP_07464844.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|261411856|gb|ACX81324.1| Sbs9 [Streptococcus gallolyticus subsp. gallolyticus]
 gi|304426112|gb|EFM29227.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 745

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 113/209 (54%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  + A   ++     +       + +PL+ ++ F+ +G+P L+       
Sbjct: 553 FAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFIFWGIPNLL------- 605

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               + + G+ + I       +F++  IALS    A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 606 ----ESITGKQSPIN------DFVAATIALSLNGGAYIAEIVRGGIEAVPQGQMEASRSL 655

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  + ++LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 656 GISYSKTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 715

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   IYL +  ++     RL  ++
Sbjct: 716 FRMYAILAVIYLVIITLLTRLAKRLEKRL 744


>gi|223932270|ref|ZP_03624273.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|223898951|gb|EEF65309.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
          Length = 732

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%)

Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219
           G+  NN G  LS   +T+      F  + V+GI+  +FA       R++        + +
Sbjct: 516 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 575

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+ ++ F+ +G+P L+           + + GQ + I       +F++  IALS  + A
Sbjct: 576 PLMIVAAFIFWGIPNLI-----------ESITGQQSPIN------DFVAGTIALSLNSGA 618

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK+++
Sbjct: 619 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 678

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  A+G  +L   G  II +  Q+  +  I   IYL
Sbjct: 679 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 714


>gi|297202327|ref|ZP_06919724.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
 gi|197710153|gb|EDY54187.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
          Length = 312

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 9/209 (4%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I + + ++G+VL   L   RLS++        +   YI  F   G P  V + L + L  
Sbjct: 81  ISILAMIVGVVLGVLLAVMRLSKN---PVTSWVAWAYIWFFR--GTPVYVQLLLWFNLAL 135

Query: 247 DKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P+L  G       + V   FM   + L    AA++AEI R+GL+AV  GQ EAA ALG
Sbjct: 136 IFPMLNLGPIYKDEMTDVMTPFMCALLGLGLNEAAYMAEICRAGLMAVDEGQTEAAHALG 195

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++H K  R +++PQAMR I+PP  ++++N+LK SSL  AV + +L+    TI + +   +
Sbjct: 196 MSHGKTLRRIVIPQAMRVIVPPTGNEFINMLKTSSLVYAVTYNELLRATSTIGSTSYAVM 255

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E++ +    YL ++ + ++F   L  + A
Sbjct: 256 EMLFVASIWYLVMTSVFSVFQYYLERRFA 284



 Score = 37.0 bits (84), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 29/59 (49%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           D  + + +L G   T  ++   MI   ++G L+   RLS N + +W+   Y+  FR  P
Sbjct: 64  DKLFDSTVLAGAGRTLLISILAMIVGVVLGVLLAVMRLSKNPVTSWVAWAYIWFFRGTP 122


>gi|134295677|ref|YP_001119412.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138834|gb|ABO54577.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 262

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 128 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 188 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 223


>gi|330832852|ref|YP_004401677.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|329307075|gb|AEB81491.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 732

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%)

Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219
           G+  NN G  LS   +T+      F  + V+GI+  +FA       R++        + +
Sbjct: 516 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 575

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+ ++ F+ +G+P L+           + + GQ + I       +F++  IALS  + A
Sbjct: 576 PLMIVAAFIFWGIPNLI-----------ESITGQQSPIN------DFVAGTIALSLNSGA 618

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK+++
Sbjct: 619 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 678

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  A+G  +L   G  II +  Q+  +  I   IYL
Sbjct: 679 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 714


>gi|313894837|ref|ZP_07828397.1| glutamine ABC transporter, permease protein GlnP [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312976518|gb|EFR41973.1| glutamine ABC transporter, permease protein GlnP [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 219

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 15/217 (6%)

Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP L +      +I V S  +G ++ L    ++R    K  + L  +Y+  F   G P 
Sbjct: 11  SFPLLLVGAGVTIQITVLSTTIGFIVGLIVA-VARISKLKPLRMLAEVYVEFFR--GTPL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y   F  PV      I G  + P F++   A    + A++AEI R+G+ +V  
Sbjct: 68  LVQIFLFY---FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDA 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA  +LG+T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G 
Sbjct: 118 GQMEAGRSLGMTWIQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            II +T  ++EI L    IYL++++ I+  +  L  +
Sbjct: 178 LIIAKTYGSMEIWLSVAVIYLAMTLTISRLVAYLERR 214


>gi|296162981|ref|ZP_06845758.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295886775|gb|EFG66616.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 246

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L  +TAA + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTVAYMLINLVVMQLM 230

Query: 386 NRLNAKIAL 394
             + AK  L
Sbjct: 231 RWVEAKTRL 239



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L GF  T  ++ S  + A I+G+L G  R   NK  + I  +YV +FRNIP
Sbjct: 18  EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIGTLYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  +  +LP+
Sbjct: 78  LIVQFFIWYLVIPELLPV 95


>gi|295677663|ref|YP_003606187.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295437506|gb|ADG16676.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 246

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 1/133 (0%)

Query: 263 SPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           S +F S  I  L  +TAA + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R
Sbjct: 107 SAQFFSASIVCLGLFTAARVCEQVRSGINALPRGQRAAGLAVGFTQWQTYRYVLLPVAYR 166

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PPLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++
Sbjct: 167 IIVPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTVAYMLINLVV 226

Query: 382 ALFMNRLNAKIAL 394
            L M  + AK  L
Sbjct: 227 MLLMRWVEAKTRL 239



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L G   T  ++ S  + A I+G+L G  R   NK  + +  VYV +FRNIP
Sbjct: 18  EPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKWASGVGTVYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  +  +LP+
Sbjct: 78  LIVQFFIWYLVIPELLPV 95


>gi|116492194|ref|YP_803929.1| ABC-type amino acid transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116102344|gb|ABJ67487.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 216

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 32/207 (15%)

Query: 192 FSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           FS ++G + ++F    S+  H       +  + +PLL ++ F    +P       +Y   
Sbjct: 29  FSLIIGSMFAIFEVLPSKVLHTIGRIYVEVVRNIPLLVVTMFFYIVIP-------QYVAS 81

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            +        F+ G+          I L+ YT+AFIAE VR+G+ +V  GQMEAA + G+
Sbjct: 82  IN-------GFVAGT----------IGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGM 124

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAI 364
           T+ +A R ++LPQA + +IPPL +Q++NL+KNSS LA   GF DL+ VG  I + +   I
Sbjct: 125 TYWQAMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGF-DLMYVGNDIASTSFDTI 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              L+   +YL +++ ++ +M  L  +
Sbjct: 184 NSYLVVGVMYLIITMPLSYYMRYLEKR 210



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           +S+ + +L G   T   +   +  + IIG++     +  +K++  I R+YVEV RNIP L
Sbjct: 6   ASHGSELLSGLGQTVLCSVIALFFSLIIGSMFAIFEVLPSKVLHTIGRIYVEVVRNIPLL 65

Query: 143 VVIFFLY 149
           VV  F Y
Sbjct: 66  VVTMFFY 72


>gi|327382993|gb|AEA54469.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei LC2W]
 gi|327386181|gb|AEA57655.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei BD-II]
          Length = 220

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 30/167 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +     FSF+LG++L L      ++F    G      + LPLL I  F  F LP 
Sbjct: 22  VTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDVIRNLPLLLILFFTYFALPD 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + +               + N +  +          IA+S + +A +AEIVRSG+ AVPR
Sbjct: 82  IGI---------------RLNVVAAAI---------IAMSIFESAMLAEIVRSGINAVPR 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           GQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA
Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164


>gi|269797857|ref|YP_003311757.1| polar amino acid ABC transporter inner membrane subunit
           [Veillonella parvula DSM 2008]
 gi|269094486|gb|ACZ24477.1| polar amino acid ABC transporter, inner membrane subunit
           [Veillonella parvula DSM 2008]
          Length = 218

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 120/215 (55%), Gaps = 17/215 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++  A      F +G+++SL    LS+    K  + L   Y+   +I G P LV I L
Sbjct: 21  VTVEITAMSVGCGFFIGLLVSL--ANLSKF---KLVRLLAKCYVD--IIRGTPLLVQIFL 73

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              ++F  P+      I G  + P +++   A S  + A+++EI R+G+ ++ +GQMEA 
Sbjct: 74  ---IYFALPM------ITGQRIDP-YIAAVTACSINSGAYVSEIFRAGIQSIDKGQMEAG 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGLT  +  R +++PQA ++IIPPL ++++ +LK+SSL   +GF +L   G  II +T
Sbjct: 124 RSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKT 183

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + EI      IYL +++ I+  +  L  K ++K
Sbjct: 184 YASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218


>gi|191638945|ref|YP_001988111.1| Glutamine transport system permease protein [Lactobacillus casei
           BL23]
 gi|190713247|emb|CAQ67253.1| Glutamine transport system permease protein [Lactobacillus casei
           BL23]
          Length = 220

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 30/167 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +     FSF+LG++L L      ++F    G      + LPLL I  F  F LP 
Sbjct: 22  VTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDVIRNLPLLLILFFTYFALPD 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + +               + N +  +          IA+S + +A +AEIVRSG+ AVPR
Sbjct: 82  IGI---------------RLNVVAAAI---------IAMSIFESAMLAEIVRSGINAVPR 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           GQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA
Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164


>gi|116495482|ref|YP_807216.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|227534091|ref|ZP_03964140.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|301066995|ref|YP_003789018.1| amino acid ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|116105632|gb|ABJ70774.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|227188272|gb|EEI68339.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|300439402|gb|ADK19168.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei str. Zhang]
          Length = 220

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 30/167 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +     FSF+LG++L L      ++F    G      + LPLL I  F  F LP 
Sbjct: 22  VTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDLIRNLPLLLILFFTYFALPD 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + +               + N +  +          IA+S + +A +AEIVRSG+ AVPR
Sbjct: 82  IGI---------------RLNVVAAAI---------IAMSIFESAMLAEIVRSGINAVPR 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           GQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA
Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164


>gi|239629874|ref|ZP_04672905.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239527486|gb|EEQ66487.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 220

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 30/167 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +     FSF+LG++L L      ++F    G      + LPLL I  F  F LP 
Sbjct: 22  VTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDLIRNLPLLLILFFTYFALPD 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + +               + N +  +          IA+S + +A +AEIVRSG+ AVPR
Sbjct: 82  IGI---------------RLNVVAAAI---------IAMSIFESAMLAEIVRSGINAVPR 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           GQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA
Sbjct: 118 GQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLA 164


>gi|222529919|ref|YP_002573801.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456766|gb|ACM61028.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 220

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 32/226 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232
           +T++  A       V G+V +LF  R+S+         F+    +  PLL    F+ +GL
Sbjct: 19  VTIELTAIAVTIGLVFGLVAALF--RISKIKLLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++            P L            P F++  IAL   + A+ AEI+R+ ++++
Sbjct: 77  PKII------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+  
Sbjct: 115 DRGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                + TG+  EI +  + IYL+L+ + +   N L  ++   E++
Sbjct: 175 AQLKASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQR 220


>gi|221212965|ref|ZP_03585941.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
 gi|221167178|gb|EED99648.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
          Length = 240

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 166 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201


>gi|91785181|ref|YP_560387.1| His/Glu/Gln/Arg/opine ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91689135|gb|ABE32335.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia xenovorans
           LB400]
          Length = 246

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L  +TAA + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTVAYMLINLVVMQLM 230

Query: 386 NRLNAKIAL 394
             + AK  L
Sbjct: 231 RWVEAKTRL 239



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L GF  T  ++ S  + A I+G+L G  R   NK  + I  +YV +FRNIP
Sbjct: 18  EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIGTLYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  +  +LP+
Sbjct: 78  LIVQFFIWYLVIPELLPV 95


>gi|328950983|ref|YP_004368318.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
 gi|328451307|gb|AEB12208.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
          Length = 283

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 122/220 (55%), Gaps = 20/220 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLL-YISTFLIF---GLPTLVL 237
           +   K+ V S + G+++ L A  +RLSR+         PL  Y + F I+   G P LV 
Sbjct: 67  EVTLKLTVISSIAGLIIGLVAGISRLSRN---------PLFRYPAAFYIWVIRGTPLLVQ 117

Query: 238 IALKYQ-LHFD-KPVLGQFNFIGGSTVSP---EFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           I   Y  L F   P+      +G  ++      + + ++AL+    A+ AE++R+G+ A+
Sbjct: 118 ILFAYNGLPFLLDPLWRPLEALGLPSIQDILVPYWAAFLALAFNVGAYNAEVIRAGIQAI 177

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA +LGL+  +  R +++PQA+R ++PPL +  + LLK+SSLA+A+   +LV  
Sbjct: 178 SKGQWEAAHSLGLSPAQVMRYIVIPQAVRIVVPPLVNNVIALLKDSSLAMAITLLELVLA 237

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  II+ T + +EI +    +YL L+ ++  F N L  ++
Sbjct: 238 GQRIISATFRPVEIYVAVAMVYLILTTVLTFFTNWLERRL 277


>gi|270307788|ref|YP_003329846.1| amino acid ABC transporter, permease protein [Dehalococcoides sp.
           VS]
 gi|270153680|gb|ACZ61518.1| amino acid ABC transporter, permease protein [Dehalococcoides sp.
           VS]
          Length = 273

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 105/186 (56%), Gaps = 20/186 (10%)

Query: 191 VFSFVLGIVLSLFAT--RLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           V S+ L ++  LF    RLS++        F+ +  + +PLL    +  F  P ++  ++
Sbjct: 68  VVSYFLMLIFGLFGALGRLSKNTILRGLATFYVEIVRGIPLLVQLIWWYFAFPVIIQ-SI 126

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L+F   +  Q N        P  M+++    CY  A+++EI R+G+ ++P+GQMEAA
Sbjct: 127 GQGLNFGPMMNYQAN--------PIVMAIWGMTFCY-GAYMSEIYRAGIQSIPKGQMEAA 177

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG++H +A R V+LPQA+R ++PP+ +++++LLK++SL   V  AD+V +G       
Sbjct: 178 RSLGMSHTQAMRFVILPQALRVVLPPMGNEFISLLKDTSLVSTVAVADMVRLGREFTATN 237

Query: 361 GQAIEI 366
              IE+
Sbjct: 238 FNPIEV 243


>gi|209547158|ref|YP_002279076.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538402|gb|ACI58336.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 290

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 119/220 (54%), Gaps = 10/220 (4%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   VF   LG +L++ AT  S +F     KA+   ++  F   G+P +V I L
Sbjct: 69  LTLELTAGAMVFGISLGCLLAVMAT--STNF---VLKAIAAGFVWWFR--GVPLIVQIFL 121

Query: 241 KYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +    P +G   ++      V+P     ++AL  + AA ++EI+RSGL+A+ RGQ E
Sbjct: 122 WFNIALFIPQVGVGHYSISINDLVTPALAG-FLALGLHEAANMSEIIRSGLLAIDRGQRE 180

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL  R+  R V+LPQA R IIPP  +Q + +LK S++   +G  DL++    I  
Sbjct: 181 AATALGLKSRQTFRTVILPQAARLIIPPTGNQAIGMLKASAIVSVIGMQDLLTQAQVIYA 240

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    IE++ +    YL+++ + ++  + L   +  K + 
Sbjct: 241 RNFLVIELLFVASIWYLAITTVASIGQHYLEKSLQPKYRN 280


>gi|300937879|ref|ZP_07152671.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300457104|gb|EFK20597.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 255

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 120 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 179

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 180 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 239

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 240 TLVERKVRL 248



 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 26  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 85

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 86  LIVQFFTWYLVIPELLP 102


>gi|300087519|ref|YP_003758041.1| polar amino acid ABC transporter inner membrane subunit
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527252|gb|ADJ25720.1| polar amino acid ABC transporter, inner membrane subunit
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 275

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 116/212 (54%), Gaps = 18/212 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++L +V+ LF   L R    K    L  +Y+   +I G+P LV +   Y   F  PV+ 
Sbjct: 72  AYLLMLVVGLFGG-LGRLAKNKFIFGLATIYVE--VIRGIPLLVQLIGWY---FASPVVI 125

Query: 253 Q-----FNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           Q      NF  +     +P   ++     CY  A+++EIVR+G+ +VP+GQMEAA +LG+
Sbjct: 126 QAVGEWLNFAPLMEYRANPIVTAIIAITVCY-GAYMSEIVRAGIQSVPKGQMEAARSLGM 184

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            H +A R V+LPQA R I+PP+ ++++ LLK+SSL   V  ADL   G   ++     IE
Sbjct: 185 NHFQAMRFVILPQAFRVILPPMGNEFIALLKDSSLVSVVAVADLTRRGREFMSAHFNPIE 244

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               W  + L L +++ LF +RL + I  K K
Sbjct: 245 ---TWTMVAL-LYLIMTLFASRLVSYIEKKTK 272


>gi|46580745|ref|YP_011553.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120601967|ref|YP_966367.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|46450165|gb|AAS96813.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562196|gb|ABM27940.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311234459|gb|ADP87313.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 230

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 20/208 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV-L 251
           +F LG+   L   RLS  +  +   A  ++Y+   +I G+P L+LI   +  +F  P+ L
Sbjct: 40  AFWLGLAFGLM--RLSEKWWVR---APAIVYVE--VIRGIPLLMLI---FWFYFLAPIAL 89

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G           PE  S  IA   +T A+IAEIVR+G++A+P GQMEAA   GL+  +A 
Sbjct: 90  GH--------TLPEAESALIAFIVFTGAYIAEIVRAGVLALPAGQMEAARGTGLSKTQAM 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIW 370
             V+LPQA+R++IP   +Q+++L K++SLA  +G ++L      + N+T  A  EI L  
Sbjct: 142 LFVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVSELTRTATQVNNRTLTAPTEIFLTI 201

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +Y  +  ++     RL  ++A  + +
Sbjct: 202 ALMYFVICWVLTATSRRLEKQMARYQAR 229



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 32/67 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SY    L G   +  LA  G+  A  +G   G  RLS    V     VYVEV R IP L
Sbjct: 16  GSYPDGPLGGMAMSILLAIGGIFGAFWLGLAFGLMRLSEKWWVRAPAIVYVEVIRGIPLL 75

Query: 143 VVIFFLY 149
           ++IF+ Y
Sbjct: 76  MLIFWFY 82


>gi|15903163|ref|NP_358713.1| amino acid ABC transporter permease/amino acid-binding protein
           [Streptococcus pneumoniae R6]
 gi|15458747|gb|AAK99923.1| ABC transporter membrane spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
          Length = 721

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R+         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQ  + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQVTKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  I    YL +  ++     RL  +I
Sbjct: 692 FKMYAILAIFYLVIITLLTRLAKRLEKRI 720


>gi|302023820|ref|ZP_07249031.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis 05HAS68]
          Length = 643

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%)

Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219
           G+  NN G  LS   +T+      F  + V+GI+  +FA       R++        + +
Sbjct: 427 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 486

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+ ++ F+ +G+P L+           + + GQ + I       +F++  IALS  + A
Sbjct: 487 PLMIVAAFIFWGIPNLI-----------ESITGQQSPIN------DFVAGTIALSLNSGA 529

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK+++
Sbjct: 530 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 589

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  A+G  +L   G  II +  Q+  +  I   IYL
Sbjct: 590 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 625


>gi|330823279|ref|YP_004386582.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|329308651|gb|AEB83066.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 250

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ +  AL  +T+A IAE VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I
Sbjct: 109 PGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTVQYYRYVLLPMAFRII 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV  ++L      +  +T + IE+ L    +  +L ++ AL
Sbjct: 169 IPPLTSETMNIFKNSSVAFAVSVSELTMYAMQVQEETSRGIEVYL----LVTALYVVSAL 224

Query: 384 FMNRLNAKIALKEK 397
            +NR+ A I  + +
Sbjct: 225 AINRIMAFIEKRSR 238



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+ Q       D +Y   +L  +  T  ++   +  A ++G+L+G  R   +    W+ R
Sbjct: 16  EVAQSCFGKGGDITYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDS--PWVVR 73

Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +   +VE FRNIP LV IF  Y  + ++ P
Sbjct: 74  LGNAWVEFFRNIPLLVHIFLWYHVIPAIFP 103


>gi|323170778|gb|EFZ56428.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli LT-68]
          Length = 246

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|46202161|ref|ZP_00208410.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 542

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 83/134 (61%), Gaps = 7/134 (5%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF+  ++ L  +T++ +AE VR+G+ + PRGQ  AA+ALGLT  +  R V LP A+R +I
Sbjct: 405 EFVIAFLCLGLFTSSRVAEQVRAGIESRPRGQRMAALALGLTETQVFRHVTLPVALRVVI 464

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTS+++N+ KNSS+A A+G A+L  V   +  ++ Q IE +     +Y     + A  
Sbjct: 465 PPLTSEFMNVFKNSSVAFAIGMAELTFVARQMQEESEQGIETLAAVTLLYF----LCAFL 520

Query: 385 MNRLNAKIALKEKK 398
            NR    +AL E++
Sbjct: 521 ANR---GMALMERR 531



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 18/126 (14%)

Query: 66  ERAGFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           E +G+  + GI    VP  +++ Y + +L   V T  ++ S    A ++G + GA R   
Sbjct: 296 ETSGYRWNWGIYFEPVPSGTET-YLSWLLWALVWTLAISLSAWALALVLGVVAGALRTVP 354

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP----------IPDHSIVLPF---G 168
           ++ VA +   YVE+FRNIP LV +F  +  V  +LP          +P    V+ F   G
Sbjct: 355 DRRVAGLATAYVELFRNIPLLVQMFLWFFVVPELLPSSWALWVKQEMPAKEFVIAFLCLG 414

Query: 169 MFLNNR 174
           +F ++R
Sbjct: 415 LFTSSR 420


>gi|319761414|ref|YP_004125351.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317115975|gb|ADU98463.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 250

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ +  AL  +T+A IAE VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I
Sbjct: 109 PGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTVQYYRYVLLPMAFRII 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV  ++L      +  +T + IE+ L    +  +L ++ AL
Sbjct: 169 IPPLTSETMNIFKNSSVAFAVSVSELTMYAMQVQEETSRGIEVYL----LVTALYVVSAL 224

Query: 384 FMNRLNAKIALKEK 397
            +NR+ A I  + +
Sbjct: 225 AINRIMAFIEKRSR 238



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+ Q       D +Y   +L  +  T  ++   +  A ++G+L+G  R   +    W+ R
Sbjct: 16  EVTQSCFGKGGDITYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDS--PWVVR 73

Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +   +VE FRNIP LV IF  Y  + ++ P
Sbjct: 74  LGNAWVEFFRNIPLLVHIFLWYHVIPAIFP 103


>gi|221197900|ref|ZP_03570946.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221204542|ref|ZP_03577559.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221175399|gb|EEE07829.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221181832|gb|EEE14233.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 251

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 117 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 176

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 177 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 212


>gi|134298596|ref|YP_001112092.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum reducens MI-1]
 gi|134051296|gb|ABO49267.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 221

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 117/219 (53%), Gaps = 16/219 (7%)

Query: 177 SFPTLTMDTNAKIFVFSFVL--GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           +FP L M     I + S  +  G ++ LF   L +    K  K   + YI  F   G P 
Sbjct: 10  AFPILMMGLKLTIQLTSLAVFFGCIIGLFVG-LGKMSRIKLIKIPAITYIEFFR--GSPL 66

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y   F  P       I G  V   F S    LS  + A+ AEI R+G+ ++ +
Sbjct: 67  LVQLFLIY---FGLPQ------ILGHPVD-RFWSAVAVLSLNSGAYCAEIFRAGIQSIEK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LG+TH +A R V+LPQA + +IPPL ++++ ++K++SL   +G A+L   G 
Sbjct: 117 GQMEAARSLGMTHIQAMRYVILPQAFKRVIPPLGNEFIAMMKDTSLVSVIGMAELARSGQ 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIA-LFMNRLNAKI 392
             I+ T +A +I  +    Y+ +++ I+  F+NR+  ++
Sbjct: 177 LYISTTYKAFQIWFLVAIFYIVMTLFISEFFVNRMERRL 215


>gi|313680182|ref|YP_004057921.1| polar amino acid ABC transporter, inner membrane subunit
           [Oceanithermus profundus DSM 14977]
 gi|313152897|gb|ADR36748.1| polar amino acid ABC transporter, inner membrane subunit
           [Oceanithermus profundus DSM 14977]
          Length = 371

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 21/226 (9%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G SF TL +   A   VF+F LG++L+L      R       +AL +LYI   LI G+P 
Sbjct: 164 GFSF-TLMLTVLAS--VFAFPLGLLLAL-----GRTGKWPVFRALSILYIE--LIRGVPL 213

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + ++ L Y +    P+     F+  S   P   S+ +  S + AA++AE VR G+  VP+
Sbjct: 214 ITVLFLSYYM---VPL-----FLPASWEVPTLFSIVVGFSMFAAAYLAEYVRGGIQGVPK 265

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALGL+  ++ R ++LPQA+RS+IP L  Q + + K++SL   +G  DL+ +  
Sbjct: 266 GQYEAAWALGLSGTQSARYIILPQAIRSVIPALIGQLIAIFKDTSLVYILGLFDLLFMAI 325

Query: 355 TIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T+       G   E++L    +Y   + +++    +L   + L  +
Sbjct: 326 TVARNPKFLGTEREVLLFIALVYFVGAALMSYASRKLERAMGLGTR 371


>gi|293397297|ref|ZP_06641569.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
 gi|291420215|gb|EFE93472.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
          Length = 292

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 157 FVSSTICLGLFTAARVCEQVRAAIQSLPRGQQAAGLAMGLTLPQTYRYVLLPNAYRVIVP 216

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 217 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIGINAVIMLVM 276

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 277 RVVERKVQL 285



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 19/130 (14%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   I  GF  T  L+    I A  +G+L G  R   N+ +A I   YVE+FRN+ P
Sbjct: 64  NTTYLGWIWSGFQVTIALSVCAWIIAFFVGSLFGILRTVPNRFLAAIGTAYVELFRNV-P 122

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+V FF +  V+  L  PD       GM+            +D N + FV S    I L 
Sbjct: 123 LIVQFFTWYLVIPELLPPD------IGMWFKAE--------LDPNVQFFVSS---TICLG 165

Query: 202 LF-ATRLSRH 210
           LF A R+   
Sbjct: 166 LFTAARVCEQ 175


>gi|22125091|ref|NP_668514.1| glutamate/aspartate ABC transport system inner membrane permease
           [Yersinia pestis KIM 10]
 gi|45440929|ref|NP_992468.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
 gi|21957946|gb|AAM84765.1|AE013722_4 glutamate/aspartate ABC transport system inner membrane permease
           [Yersinia pestis KIM 10]
 gi|45435788|gb|AAS61345.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
          Length = 263

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 128 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIP 187

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  ++ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 188 PMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 247

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 248 RLVEKKVQL 256



 Score = 43.5 bits (101), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 34  GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVP 93

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  V  +LP+
Sbjct: 94  LIVQFFTWYLVVPELLPV 111


>gi|82543097|ref|YP_407044.1| glutamate-aspartate transport system permease [Shigella boydii
           Sb227]
 gi|187733686|ref|YP_001879337.1| glutamate/aspartate ABC transporter permease GltJ [Shigella boydii
           CDC 3083-94]
 gi|81244508|gb|ABB65216.1| glutamate-aspartate transport system permease [Shigella boydii
           Sb227]
 gi|187430678|gb|ACD09952.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Shigella boydii CDC 3083-94]
 gi|320185367|gb|EFW60137.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella flexneri CDC 796-83]
 gi|332097750|gb|EGJ02724.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           boydii 3594-74]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAIIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|242280828|ref|YP_002992957.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123722|gb|ACS81418.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 593

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 81/130 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E +S  + L  YT++F+AE++R+G+ ++P+G +EAA + GLT  +    ++LP A R+II
Sbjct: 138 EMLSATVGLGIYTSSFMAEVIRAGIQSIPKGLLEAAYSSGLTPFQTLTKIILPLAFRAII 197

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL S++LN +KNSSLA+ VG  ++      I   T +  E       IYLSLS+ IA  
Sbjct: 198 PPLGSEFLNNMKNSSLAMVVGVPEICWASQQIEGMTFKGFEATTAATVIYLSLSLTIAGI 257

Query: 385 MNRLNAKIAL 394
           +  +N K+ +
Sbjct: 258 LTLVNWKLQI 267



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 115/205 (56%), Gaps = 20/205 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL- 251
           SF +G+++ +  T  ++ F   +      LYI   LI G P +++I   + ++F  P+L 
Sbjct: 401 SFFIGLIVGIGRTSKNKLFLIPS-----TLYIE--LIRGNPLIMVI---FWIYFFIPILT 450

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           GQF  +        F S  IAL+ +T A++AEIVRSG+  +P GQ EAA++ GLT+ +A 
Sbjct: 451 GQFLNV--------FWSATIALTVFTGAYLAEIVRSGIQNLPPGQFEAAVSTGLTYWQAM 502

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIW 370
           R V+LPQA++ ++P +  Q++ + K++SLA  +G  +L  V   + N+      EI    
Sbjct: 503 RKVILPQALKQMLPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLNNRLMIYPFEIYTTV 562

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
            F+Y     +++L   RL  K++ +
Sbjct: 563 AFLYFICCYLMSLVARRLERKLSTE 587


>gi|320530119|ref|ZP_08031189.1| putative glutamine ABC transporter permease protein [Selenomonas
           artemidis F0399]
 gi|320137552|gb|EFW29464.1| putative glutamine ABC transporter permease protein [Selenomonas
           artemidis F0399]
          Length = 219

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 15/217 (6%)

Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP L +      +I V S  +G ++ L    ++R    K  + L  +Y+  F   G P 
Sbjct: 11  SFPLLLVGAGVTIQITVLSTTIGFIVGLIVA-VARISKLKLLRILAEVYVEFFR--GTPL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y   F  PV      I G  + P F++   A    + A++AEI R+G+ +V  
Sbjct: 68  LVQIFLFY---FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDA 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA  +LG+T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G 
Sbjct: 118 GQMEAGRSLGMTWIQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            II +T  ++EI L    IYL++++ I+  +  L  +
Sbjct: 178 LIIAKTYGSMEIWLSVAVIYLAMTLTISRLVAYLERR 214



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           I+G +V   R+S  KL+  +  VYVE FR  P LV IF  Y +    LP+     + PF
Sbjct: 35  IVGLIVAVARISKLKLLRILAEVYVEFFRGTPLLVQIFLFYFA----LPVITGQRIDPF 89


>gi|332160867|ref|YP_004297444.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318604770|emb|CBY26268.1| glutamate Aspartate transport system permease protein GltJ
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325665097|gb|ADZ41741.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RIVEKKVQL 239



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSIGACYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFTWYLVVPELLP 93


>gi|260597071|ref|YP_003209642.1| glutamate/aspartate transport system permease gltJ [Cronobacter
           turicensis z3032]
 gi|260216248|emb|CBA29165.1| Glutamate/aspartate transport system permease protein gltJ
           [Cronobacter turicensis z3032]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I + M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVFINTVIMVVM 230

Query: 386 NRLNAKIAL 394
           N +  K+ L
Sbjct: 231 NLVERKVRL 239



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 19/130 (14%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   +  GF  T  L+ S  I A ++G+L G  R   N+ ++ +   YVE+FRN+P 
Sbjct: 18  NTTYLGWLWSGFQVTVALSISAWIIAFLVGSLFGILRTVPNRFLSALGTCYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +V  F  Y  V  +LP               + G+ F    +D N + F+ S    I L 
Sbjct: 78  IVQFFTWYLVVPELLP--------------EDLGMWFKA-ELDPNVQFFLSSM---ICLG 119

Query: 202 LF-ATRLSRH 210
           LF A R+   
Sbjct: 120 LFTAARVCEQ 129


>gi|145589172|ref|YP_001155769.1| polar amino acid ABC transporter, inner membrane subunit
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047578|gb|ABP34205.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 260

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 84/135 (62%), Gaps = 7/135 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P ++ + +AL  +T+A IAE VR+G+ ++P GQ  AA ALGL   ++ R V+LP A+R +
Sbjct: 117 PSYLLVSLALGFFTSARIAEQVRAGIQSLPSGQRAAATALGLNTFQSYRYVILPMALRIV 176

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +NL+KNSS+A AV   +L         +T   +E       IYL+++I+ AL
Sbjct: 177 IPPLTSESMNLIKNSSVAFAVSVPELTLFAMQAQEETSHGVE-------IYLAVTILYAL 229

Query: 384 FMNRLNAKIALKEKK 398
               +N  +AL EK+
Sbjct: 230 SAFAINRAMALIEKR 244


>gi|74311190|ref|YP_309609.1| glutamate/aspartate transport system permease [Shigella sonnei
           Ss046]
 gi|170681365|ref|YP_001742771.1| glutamate/aspartate ABC transporter permease GltJ [Escherichia coli
           SMS-3-5]
 gi|193063371|ref|ZP_03044461.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E22]
 gi|193069039|ref|ZP_03049997.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E110019]
 gi|194429737|ref|ZP_03062253.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli B171]
 gi|218553196|ref|YP_002386109.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli IAI1]
 gi|218694094|ref|YP_002401761.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli 55989]
 gi|256020606|ref|ZP_05434471.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily protein [Shigella sp. D9]
 gi|260842880|ref|YP_003220658.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O103:H2 str. 12009]
 gi|260853905|ref|YP_003227796.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O26:H11 str. 11368]
 gi|260866802|ref|YP_003233204.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O111:H- str. 11128]
 gi|293413950|ref|ZP_06656599.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B185]
 gi|293418766|ref|ZP_06661201.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B088]
 gi|300817826|ref|ZP_07098040.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300823029|ref|ZP_07103163.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|307312630|ref|ZP_07592262.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|331667008|ref|ZP_08367882.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA271]
 gi|331676314|ref|ZP_08377026.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H591]
 gi|73854667|gb|AAZ87374.1| glutamate/aspartate transport system permease [Shigella sonnei
           Ss046]
 gi|170519083|gb|ACB17261.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli SMS-3-5]
 gi|192930955|gb|EDV83559.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E22]
 gi|192957583|gb|EDV88028.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E110019]
 gi|194412218|gb|EDX28524.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli B171]
 gi|218350826|emb|CAU96520.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli 55989]
 gi|218359964|emb|CAQ97508.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli IAI1]
 gi|257752554|dbj|BAI24056.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O26:H11 str. 11368]
 gi|257758027|dbj|BAI29524.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O103:H2 str. 12009]
 gi|257763158|dbj|BAI34653.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O111:H- str. 11128]
 gi|291325294|gb|EFE64709.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B088]
 gi|291434008|gb|EFF06981.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B185]
 gi|300524378|gb|EFK45447.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529523|gb|EFK50585.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|306907332|gb|EFN37837.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|315059909|gb|ADT74236.1| glutamate and aspartate transporter subunit [Escherichia coli W]
 gi|320198221|gb|EFW72825.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli EC4100B]
 gi|323153621|gb|EFZ39869.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli EPECa14]
 gi|323158892|gb|EFZ44903.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli E128010]
 gi|323179869|gb|EFZ65426.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1180]
 gi|323184991|gb|EFZ70358.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1357]
 gi|323379527|gb|ADX51795.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323945129|gb|EGB41191.1| inner membrane transport system [Escherichia coli H120]
 gi|324116728|gb|EGC10643.1| inner membrane transport system [Escherichia coli E1167]
 gi|331066232|gb|EGI38116.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA271]
 gi|331076372|gb|EGI47654.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H591]
 gi|332104147|gb|EGJ07493.1| glutamate/aspartate transport system permease [Shigella sp. D9]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|253755502|ref|YP_003028642.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|251817966|emb|CAZ55746.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis BM407]
          Length = 732

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 116/216 (53%), Gaps = 25/216 (11%)

Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219
           G+  NN G  LS   +T+      F  + V+GI+  +FA       R++        + +
Sbjct: 516 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 575

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+ ++ F+ +G+P L+           + + GQ + I       +F++  IALS  ++A
Sbjct: 576 PLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLNSSA 618

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK+++
Sbjct: 619 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 678

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  A+G  +L   G  II +  Q+  +  I   IYL
Sbjct: 679 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 714


>gi|288550054|ref|ZP_05969126.2| glutamate/aspartate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316572|gb|EFC55510.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 250

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 78/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 115 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 174

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 175 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 234

Query: 386 NRLNAK 391
           N +  K
Sbjct: 235 NLVERK 240



 Score = 43.1 bits (100), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 19/130 (14%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   +  GF  T  L+ +  I A +IG+L G  R   N+ ++ +  +YVE+FRN+P 
Sbjct: 22  NTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSSLGTLYVELFRNVPL 81

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +V  F  Y  +  +LP               N G+ F    +D N + FV S    + L 
Sbjct: 82  IVQFFTWYLVIPELLP--------------ENIGMWFKA-ELDPNVQFFVSSM---LCLG 123

Query: 202 LF-ATRLSRH 210
           LF A R+   
Sbjct: 124 LFTAARVCEQ 133


>gi|307130053|ref|YP_003882069.1| membrane protein of an ABC superfamily glutamate/aspartate
           transporter [Dickeya dadantii 3937]
 gi|306527582|gb|ADM97512.1| membrane component of an ABC superfamily glutamate/aspartate
           transporter [Dickeya dadantii 3937]
          Length = 224

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R++I
Sbjct: 96  RLVSAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALALGMTHWQSMRLVILPQAFRAMI 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASML 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 VNYLKRR 222



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           GT++   RLS  K ++W  ++YV +FR++P ++V+ + Y  V S+L
Sbjct: 38  GTVLAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLIVPSLL 83


>gi|306825135|ref|ZP_07458477.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Streptococcus sp.
           oral taxon 071 str. 73H25AP]
 gi|304432571|gb|EFM35545.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Streptococcus sp.
           oral taxon 071 str. 73H25AP]
          Length = 721

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 23/192 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       RL         + +PL+ ++ F+ +G+P          
Sbjct: 529 FAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFIFWGIP---------- 578

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 579 -NFIESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSL 631

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 632 GISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQS 691

Query: 364 IEIILIWMFIYL 375
            ++  I    YL
Sbjct: 692 FKMYAILAIFYL 703


>gi|149365485|ref|ZP_01887520.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CA88-4125]
 gi|165925373|ref|ZP_02221205.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937693|ref|ZP_02226255.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|167422564|ref|ZP_02314317.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167468411|ref|ZP_02333115.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis FV-1]
 gi|218929695|ref|YP_002347570.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CO92]
 gi|229838161|ref|ZP_04458320.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229898728|ref|ZP_04513873.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|115348306|emb|CAL21237.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CO92]
 gi|149291898|gb|EDM41972.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CA88-4125]
 gi|165914443|gb|EDR33058.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922980|gb|EDR40131.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|166958578|gb|EDR55599.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|229688276|gb|EEO80347.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694527|gb|EEO84574.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  ++ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V     Y  V  +LP+
Sbjct: 77  LIVQFLTWYLVVPELLPV 94


>gi|300901165|ref|ZP_07119270.1| putative ATP synthase F0, A subunit [Escherichia coli MS 198-1]
 gi|300959228|ref|ZP_07171304.1| putative ATP synthase F0, A subunit [Escherichia coli MS 175-1]
 gi|300314173|gb|EFJ63957.1| putative ATP synthase F0, A subunit [Escherichia coli MS 175-1]
 gi|300355404|gb|EFJ71274.1| putative ATP synthase F0, A subunit [Escherichia coli MS 198-1]
          Length = 255

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 120 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 179

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 180 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 239

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 240 TLVERKVRL 248



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 26  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 85

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 86  LIVQFFTWYLVIPELLP 102


>gi|312958495|ref|ZP_07773015.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311287038|gb|EFQ65599.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 319

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 115/205 (56%), Gaps = 17/205 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S +LG+ + L AT L R     T + L  +Y+   L+ G P LV I + Y          
Sbjct: 131 SGILGLAIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGTPLLVQIFIFY---------- 177

Query: 253 QFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              FIG    +S EF  +  ALS +T A++AEIVR+G+ ++ RGQ EAA +LGL+  ++ 
Sbjct: 178 --FFIGTVLNLSREFAGI-AALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSAGQSM 234

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA + ++PPL  Q+++L+K++SL   +   +L+  G  +I  +    EI+    
Sbjct: 235 RHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVA 294

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            +YL +++ ++   +RL  ++A  +
Sbjct: 295 GLYLLINLPLSKMASRLERRLAQSD 319



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 30/61 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T WL+    I    IG   G  RLS+N  +  +  +YVE+ R  P LV IF  
Sbjct: 117 LMWGLWTTLWLSAVSGILGLAIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 176

Query: 149 Y 149
           Y
Sbjct: 177 Y 177


>gi|227327383|ref|ZP_03831407.1| glutamate/aspartate transport system permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 224

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+++V RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGILSVSRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   FIY   SI  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFLFSITASML 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  +  + ++   + GT++   RLS  K ++W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVVTLKITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLV 78

Query: 152 VLSVL 156
           V S+L
Sbjct: 79  VPSLL 83


>gi|39998494|ref|NP_954445.1| amino acid ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39985441|gb|AAR36795.1| amino acid ABC transporter, permease protein [Geobacter
           sulfurreducens PCA]
 gi|298507439|gb|ADI86162.1| amino acid ABC transporter, membrane protein [Geobacter
           sulfurreducens KN400]
          Length = 263

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 117/207 (56%), Gaps = 19/207 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V + +L +V+ L A  L R    +    +  LY+   +I G+P LV      QL + 
Sbjct: 70  QVTVGAILLALVIGLVAG-LGRISSNRIINGIASLYVE--IIRGIPLLV------QLFYI 120

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              LG+F  +      P+  S  IA++    A++ E++R+G+ ++P+GQMEAA +LG+T 
Sbjct: 121 YYALGRFVHV------PDMASAIIAMAVCYGAYMGEVIRAGIQSIPKGQMEAARSLGMTK 174

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-- 365
            +A R V+LPQA + ++PP+ ++++ LLK+SSL   +  AD++  G    +++    E  
Sbjct: 175 GQAMRHVILPQAAKVVLPPIGNEFIALLKDSSLVSILAVADILRRGREFASESFTYFETY 234

Query: 366 --IILIWMFIYLSLSIMIALFMNRLNA 390
             I L+++ I L LS +I +   R++A
Sbjct: 235 TVIALVYLIITLFLSKLIGIMEERISA 261



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 45/71 (63%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++ A +IG + G GR+S+N+++  I  +YVE+ R IP LV +F++Y +
Sbjct: 64  GILVTFQVTVGAILLALVIGLVAGLGRISSNRIINGIASLYVEIIRGIPLLVQLFYIYYA 123

Query: 152 VLSVLPIPDHS 162
           +   + +PD +
Sbjct: 124 LGRFVHVPDMA 134


>gi|238786078|ref|ZP_04630036.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia bercovieri ATCC 43970]
 gi|238795398|ref|ZP_04638913.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia mollaretii ATCC 43969]
 gi|238713017|gb|EEQ05071.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia bercovieri ATCC 43970]
 gi|238720517|gb|EEQ12318.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia mollaretii ATCC 43969]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSVICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMVNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  IG+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSLCAWVIAFFIGSLFGILRTVPNRILSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP+         GM+  +         +D N + F+ S    I L
Sbjct: 77  LIVQFFTWYLVVPELLPV-------DIGMWFKSE--------LDPNIQFFLSSV---ICL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|239817010|ref|YP_002945920.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239803587|gb|ACS20654.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 240

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 98/170 (57%), Gaps = 11/170 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++ GLP L++I   Y   F   V G          + +F ++ IAL  + AA++AEIVR
Sbjct: 66  FVVRGLPLLMVIFWAY--FFLPSVTG--------VKTDQFTTMLIALVVFDAAYLAEIVR 115

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  +PRGQME A ALGL + +A RLV+LPQA+RS++P L +Q+++ +K +SL   +G 
Sbjct: 116 AGIQGLPRGQMETARALGLDYGRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIGL 175

Query: 347 ADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A++  +   I  Q   +  +I LI    Y  L   ++ F   L  ++A +
Sbjct: 176 AEVSFIATQINTQVFTKPAQIYLILGLTYFILCFGLSRFAYWLERRLARR 225


>gi|324016085|gb|EGB85304.1| putative ATP synthase F0, A subunit [Escherichia coli MS 117-3]
          Length = 255

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 120 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 179

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 180 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 239

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 240 TLVERKVRL 248



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 26  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 85

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 86  LIVQFFTWYLVIPELLP 102


>gi|282848846|ref|ZP_06258236.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|294791750|ref|ZP_06756898.1| glutamine ABC transporter, permease protein [Veillonella sp.
           6_1_27]
 gi|294793611|ref|ZP_06758748.1| glutamine ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|282581351|gb|EFB86744.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|294455181|gb|EFG23553.1| glutamine ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|294456980|gb|EFG25342.1| glutamine ABC transporter, permease protein [Veillonella sp.
           6_1_27]
          Length = 218

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 99/168 (58%), Gaps = 10/168 (5%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV I L   ++F  P+      I G  + P +++   A S  + A+++EI R+
Sbjct: 61  IIRGTPLLVQIFL---IYFALPM------ITGQRIDP-YIAAVTACSINSGAYVSEIFRA 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQMEA  +LGLT  +  R +++PQA ++IIPPL ++++ +LK+SSL   +GF 
Sbjct: 111 GIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVIGFE 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L   G  II +T  + EI      IYL +++ I+  +  L  K ++K
Sbjct: 171 ELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218


>gi|259047505|ref|ZP_05737906.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
 gi|259035696|gb|EEW36951.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
          Length = 213

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 19/207 (9%)

Query: 192 FSFVLGIVL-SLFA-TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FS V+G+   +L A  RLS H   K       +YI   +I G P LV +   Y ++F   
Sbjct: 24  FSVVVGVGCGTLMALARLSSH---KVLSNAAKVYID--IIRGTPLLVQL---YLVYFGLA 75

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +   N         +F+S  IA+S  T A+IAEI+RSG+ +V +GQMEAA ++G+    
Sbjct: 76  TILDLN---------DFLSGVIAVSVNTTAYIAEIIRSGIQSVDKGQMEAARSMGMPKGM 126

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R ++LPQAM++I+P + +++  L+K +S+   +G  DL+    T+   T      +L+
Sbjct: 127 AMRQIILPQAMKNILPAIGNEFATLIKETSIVSLIGIHDLMYSSDTVRGATFTVFIPLLM 186

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
             F+Y  ++  IA FM++L  K+   +
Sbjct: 187 TAFLYFVMTTTIAFFMDKLERKLQASD 213



 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 40/69 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+F  ++     GTL+   RLS++K+++   +VY+++ R  P LV ++ +Y  
Sbjct: 14  GATTTILLSFFSVVVGVGCGTLMALARLSSHKVLSNAAKVYIDIIRGTPLLVQLYLVYFG 73

Query: 152 VLSVLPIPD 160
           + ++L + D
Sbjct: 74  LATILDLND 82


>gi|261822384|ref|YP_003260490.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261606397|gb|ACX88883.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 224

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+++V RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGILSVSRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   FIY   SI  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFLFSITASML 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  +  + ++   + GT++   RLS  K ++W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVVTLEITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLV 78

Query: 152 VLSVL 156
           V S+L
Sbjct: 79  VPSLL 83


>gi|167836673|ref|ZP_02463556.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis MSMB43]
          Length = 241

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 66/96 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LSCYT+AF+AE  ++GL  VP  Q  AA ALGL+  +  R V+LPQA+R  +
Sbjct: 107 EFVAGWVGLSCYTSAFVAEEFQAGLRGVPAAQHHAASALGLSPLQTFRFVVLPQAVRIAL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|295698918|ref|YP_003606811.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438131|gb|ADG17300.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 248

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 6/143 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYT 277
           PLL    F  FG  TL+       L+    V    +  G +   P  EF++ ++ L+CYT
Sbjct: 64  PLLVQLLFWYFGAATLLPQPWMEWLNASHTV----SLSGWTIAWPSFEFVAGWVGLTCYT 119

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF+ E  R+G+  V   Q +AA ALGLT   A R V+LPQA+R   PPL  QY+NL+KN
Sbjct: 120 TAFVGEEFRAGMRGVNDAQHQAAAALGLTPLAAFRYVILPQAIRIATPPLAGQYMNLVKN 179

Query: 338 SSLAVAVGFADLVSVGGTIINQT 360
           SSLA+ +G A+L  V   +  +T
Sbjct: 180 SSLAMTIGLAELSYVSRQVDTET 202


>gi|227114973|ref|ZP_03828629.1| glutamate/aspartate transport system permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 224

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+++V RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGILSVSRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   FIY   SI  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFLFSITASML 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  +  + ++   I GT++   RLS  K ++W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVVTLKITLTAVVFGIIWGTILAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLV 78

Query: 152 VLSVL 156
           V S+L
Sbjct: 79  VPSLL 83


>gi|116513634|ref|YP_812540.1| ABC-type amino acid transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092949|gb|ABJ58102.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|325125284|gb|ADY84614.1| Glutamine ABC transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 213

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS Y++AFIAE VRSG+ +V  GQME A + G+T+ +A R V+LPQA R +IP L +Q
Sbjct: 91  IGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIPSLGNQ 150

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  + + T Q I   ++    YL L++ ++ +M  L 
Sbjct: 151 FVNLIKNSSILAFVAGF-DLMYQGDIVASNTFQTIPSYVLVSLFYLVLTLPLSYYMQYLE 209

Query: 390 AK 391
            K
Sbjct: 210 KK 211


>gi|37525273|ref|NP_928617.1| glutamate/aspartate transport system permease protein GltJ
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36784700|emb|CAE13600.1| Glutamate/aspartate transport system permease protein GltJ
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S    L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSTACLGLFTAARMCEQVRAAIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++++I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYIGINLVIMLAM 230

Query: 386 NRLNAKIAL 394
           + L  K+ L
Sbjct: 231 HLLEKKVRL 239



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   ++ GF  T  L+    I A I+G+L G  R   NK+++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWLIAGFQVTIALSICAWIIAFIVGSLFGILRTVPNKILSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFIWYLVVPELLP 93


>gi|315287081|gb|EFU46495.1| putative ATP synthase F0, A subunit [Escherichia coli MS 110-3]
          Length = 257

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 122 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 182 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 241

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 242 TLVERKVRL 250



 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 28  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 87

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 88  LIVQFFTWYLVIPELLP 104


>gi|51595454|ref|YP_069645.1| ABC glutamate/aspartate transporter, permease subunit gltJ
           [Yersinia pseudotuberculosis IP 32953]
 gi|108808476|ref|YP_652392.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Antiqua]
 gi|108811263|ref|YP_647030.1| glutamate/aspartate transport system permease [Yersinia pestis
           Nepal516]
 gi|145599902|ref|YP_001163978.1| glutamate/aspartate transport system permease [Yersinia pestis
           Pestoides F]
 gi|153948463|ref|YP_001401883.1| glutamate/aspartate ABC transporter permease GltJ [Yersinia
           pseudotuberculosis IP 31758]
 gi|166008428|ref|ZP_02229326.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212579|ref|ZP_02238614.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167399443|ref|ZP_02304967.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167423628|ref|ZP_02315381.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|170025232|ref|YP_001721737.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894485|ref|YP_001871597.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229895953|ref|ZP_04511123.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Pestoides A]
 gi|229901501|ref|ZP_04516623.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Nepal516]
 gi|270489687|ref|ZP_06206761.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504418|ref|YP_003568480.1| glutamate/aspartate transport system permease [Yersinia pestis
           Z176003]
 gi|51588736|emb|CAH20347.1| ABC glutamate/aspartate transporter, permease subunit gltJ
           [Yersinia pseudotuberculosis IP 32953]
 gi|108774911|gb|ABG17430.1| glutamate/aspartate transport system permease [Yersinia pestis
           Nepal516]
 gi|108780389|gb|ABG14447.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Antiqua]
 gi|145211598|gb|ABP41005.1| glutamate/aspartate transport system permease [Yersinia pestis
           Pestoides F]
 gi|152959958|gb|ABS47419.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pseudotuberculosis IP 31758]
 gi|165992810|gb|EDR45111.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206510|gb|EDR50990.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167051947|gb|EDR63355.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057798|gb|EDR67544.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169751766|gb|ACA69284.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697511|gb|ACC88140.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681430|gb|EEO77524.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Nepal516]
 gi|229700876|gb|EEO88905.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Pestoides A]
 gi|262362592|gb|ACY59313.1| glutamate/aspartate transport system permease [Yersinia pestis
           D106004]
 gi|262366404|gb|ACY62961.1| glutamate/aspartate transport system permease [Yersinia pestis
           D182038]
 gi|270338191|gb|EFA48968.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294354877|gb|ADE65218.1| glutamate/aspartate transport system permease [Yersinia pestis
           Z176003]
 gi|320016182|gb|ADV99753.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIP
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  ++ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 RLVEKKVQL 239



 Score = 43.1 bits (100), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    + A  +G+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGIGACYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  V  +LP+
Sbjct: 77  LIVQFFTWYLVVPELLPV 94


>gi|148652492|ref|YP_001279585.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148571576|gb|ABQ93635.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 248

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 9/205 (4%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFD 247
           ++ +  +G VL +      R    KT + +  +Y++ F    +P LV +   + +   + 
Sbjct: 40  WILALGIGTVLGIM-----RTLPSKTARTIGTMYVTFFR--NIPLLVQLFFWFYVAPGWL 92

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PVL ++ + G S      +S  I L  +TAA I E VR+G+ ++P GQ  AA ALG + 
Sbjct: 93  TPVLQEWWYKGLSPNMSAMISASIGLGLFTAARITEQVRTGIQSLPEGQHNAAYALGFST 152

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +A R VLLPQA R I+PPL+S+  N  KN+S+A  VG  +L+S   TI   T   IEI 
Sbjct: 153 AQAYRQVLLPQAFRVILPPLSSELTNCYKNASIASLVGVMELISQTKTISEYTQNNIEIY 212

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
                IYL  ++ +   M  +  K+
Sbjct: 213 TYATIIYLLFNLSLIGIMGLIEQKL 237


>gi|91209695|ref|YP_539681.1| GltJ subunit of glutamate ABC transporter [Escherichia coli UTI89]
 gi|91071269|gb|ABE06150.1| GltJ, subunit of glutamate ABC transporter [Escherichia coli UTI89]
 gi|307627915|gb|ADN72219.1| glutamate and aspartate transporter subunit [Escherichia coli
           UM146]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|300927241|ref|ZP_07142972.1| putative ATP synthase F0, A subunit [Escherichia coli MS 182-1]
 gi|300951154|ref|ZP_07165018.1| putative ATP synthase F0, A subunit [Escherichia coli MS 116-1]
 gi|300996683|ref|ZP_07181508.1| putative ATP synthase F0, A subunit [Escherichia coli MS 200-1]
 gi|300304461|gb|EFJ58981.1| putative ATP synthase F0, A subunit [Escherichia coli MS 200-1]
 gi|300416791|gb|EFK00102.1| putative ATP synthase F0, A subunit [Escherichia coli MS 182-1]
 gi|300449583|gb|EFK13203.1| putative ATP synthase F0, A subunit [Escherichia coli MS 116-1]
 gi|315292093|gb|EFU51445.1| putative ATP synthase F0, A subunit [Escherichia coli MS 153-1]
 gi|324006309|gb|EGB75528.1| putative ATP synthase F0, A subunit [Escherichia coli MS 57-2]
 gi|324010471|gb|EGB79690.1| putative ATP synthase F0, A subunit [Escherichia coli MS 60-1]
          Length = 253

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 118 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 177

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 178 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 237

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 238 TLVERKVRL 246



 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 24  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 83

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 84  LIVQFFTWYLVIPELLP 100


>gi|315299179|gb|EFU58433.1| putative ATP synthase F0, A subunit [Escherichia coli MS 16-3]
          Length = 256

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 121 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 180

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 181 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 240

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 241 TLVERKVRL 249



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 27  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 86

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 87  LIVQFFTWYLVIPELLP 103


>gi|262282395|ref|ZP_06060163.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus sp. 2_1_36FAA]
 gi|262261686|gb|EEY80384.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus sp. 2_1_36FAA]
          Length = 485

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  +F+       R          + +PL+ ++ F+ +G+P L+      Q
Sbjct: 293 FAIALVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGVPLMILAAFIFWGIPNLIESITNQQ 352

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +       +F+ G+          IALS  + A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 353 SPIN-------DFVAGT----------IALSLNSGAYIAEIVRGGIQAVPVGQMEASRSL 395

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 396 GISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKNIIARNYQS 455

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +   +     RL  +I
Sbjct: 456 FRMYAILAVLYLLIITFLTRLAKRLEKRI 484


>gi|16128637|ref|NP_415187.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|26246628|ref|NP_752668.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli CFT073]
 gi|89107523|ref|AP_001303.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|110640876|ref|YP_668604.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli 536]
 gi|117622863|ref|YP_851776.1| glutamate and aspartate transporter subunit [Escherichia coli APEC
           O1]
 gi|157155111|ref|YP_001461824.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E24377A]
 gi|157160142|ref|YP_001457460.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli HS]
 gi|170020989|ref|YP_001725943.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170080233|ref|YP_001729553.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170080334|ref|YP_001729654.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|188496270|ref|ZP_03003540.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli 53638]
 gi|191168688|ref|ZP_03030468.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli B7A]
 gi|191173965|ref|ZP_03035483.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli F11]
 gi|194439894|ref|ZP_03071957.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli 101-1]
 gi|209917915|ref|YP_002291999.1| glutamate/aspartate ABC transporter permease [Escherichia coli
           SE11]
 gi|218549770|ref|YP_002383561.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia fergusonii ATCC 35469]
 gi|218557585|ref|YP_002390498.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli S88]
 gi|218688470|ref|YP_002396682.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli ED1a]
 gi|218703988|ref|YP_002411507.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli UMN026]
 gi|227884373|ref|ZP_04002178.1| GltJ subunit of glutamate ABC superfamily ATP binding cassette
           transporter [Escherichia coli 83972]
 gi|237707379|ref|ZP_04537860.1| glutamate/aspartate transporter gltJ [Escherichia sp. 3_2_53FAA]
 gi|238899931|ref|YP_002925727.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|253774362|ref|YP_003037193.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160733|ref|YP_003043841.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|256023734|ref|ZP_05437599.1| glutamate and aspartate transporter subunit [Escherichia sp.
           4_1_40B]
 gi|293403916|ref|ZP_06647910.1| glutamate Aspartate transport system permease gltJ [Escherichia
           coli FVEC1412]
 gi|293408780|ref|ZP_06652619.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B354]
 gi|298379691|ref|ZP_06989296.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli FVEC1302]
 gi|300907832|ref|ZP_07125448.1| putative ATP synthase F0, A subunit [Escherichia coli MS 84-1]
 gi|300920530|ref|ZP_07136956.1| putative ATP synthase F0, A subunit [Escherichia coli MS 115-1]
 gi|300931589|ref|ZP_07146901.1| putative ATP synthase F0, A subunit [Escherichia coli MS 187-1]
 gi|300989987|ref|ZP_07179063.1| putative ATP synthase F0, A subunit [Escherichia coli MS 45-1]
 gi|301025219|ref|ZP_07188788.1| putative ATP synthase F0, A subunit [Escherichia coli MS 69-1]
 gi|301028863|ref|ZP_07192038.1| putative ATP synthase F0, A subunit [Escherichia coli MS 196-1]
 gi|301049844|ref|ZP_07196783.1| putative ATP synthase F0, A subunit [Escherichia coli MS 185-1]
 gi|301302136|ref|ZP_07208269.1| putative ATP synthase F0, A subunit [Escherichia coli MS 124-1]
 gi|301643930|ref|ZP_07243957.1| putative ATP synthase F0, A subunit [Escherichia coli MS 146-1]
 gi|306812921|ref|ZP_07447114.1| glutamate and aspartate transporter subunit [Escherichia coli
           NC101]
 gi|307137271|ref|ZP_07496627.1| glutamate and aspartate transporter subunit [Escherichia coli H736]
 gi|312970729|ref|ZP_07784910.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1827-70]
 gi|331641158|ref|ZP_08342293.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H736]
 gi|331645811|ref|ZP_08346914.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli M605]
 gi|331651667|ref|ZP_08352686.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli M718]
 gi|331656674|ref|ZP_08357636.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA206]
 gi|331662020|ref|ZP_08362943.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA143]
 gi|331672186|ref|ZP_08372978.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA280]
 gi|331682071|ref|ZP_08382695.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H299]
 gi|84028709|sp|P0AER4|GLTJ_ECOL6 RecName: Full=Glutamate/aspartate transport system permease protein
           gltJ
 gi|84028710|sp|P0AER3|GLTJ_ECOLI RecName: Full=Glutamate/aspartate transport system permease protein
           gltJ
 gi|26107027|gb|AAN79211.1|AE016757_115 Glutamate/aspartate transport system permease protein gltJ
           [Escherichia coli CFT073]
 gi|624630|gb|AAA60980.1| GltJ [Escherichia coli]
 gi|1651273|dbj|BAA35306.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K12 substr. W3110]
 gi|1778572|gb|AAB40855.1| glutamate/aspartate transport system permease protein [Escherichia
           coli]
 gi|1786874|gb|AAC73755.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|110342468|gb|ABG68705.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli 536]
 gi|115511987|gb|ABJ00062.1| glutamate and aspartate transporter subunit [Escherichia coli APEC
           O1]
 gi|157065822|gb|ABV05077.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli HS]
 gi|157077141|gb|ABV16849.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E24377A]
 gi|169755917|gb|ACA78616.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169888068|gb|ACB01775.1| glutamate and aspartate transporter subunit; membrane component of
           ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|169888169|gb|ACB01876.1| glutamate and aspartate transporter subunit; membrane component of
           ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188491469|gb|EDU66572.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli 53638]
 gi|190901280|gb|EDV61049.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli B7A]
 gi|190905741|gb|EDV65362.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli F11]
 gi|194421188|gb|EDX37212.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli 101-1]
 gi|209911174|dbj|BAG76248.1| glutamate/aspartate ABC transporter permease component [Escherichia
           coli SE11]
 gi|218357311|emb|CAQ89946.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia fergusonii ATCC 35469]
 gi|218364354|emb|CAR02029.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli S88]
 gi|218426034|emb|CAR06851.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli ED1a]
 gi|218431085|emb|CAR11961.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli UMN026]
 gi|222032407|emb|CAP75146.1| glutamate/aspartate transport system permease protein [Escherichia
           coli LF82]
 gi|226898589|gb|EEH84848.1| glutamate/aspartate transporter gltJ [Escherichia sp. 3_2_53FAA]
 gi|227838459|gb|EEJ48925.1| GltJ subunit of glutamate ABC superfamily ATP binding cassette
           transporter [Escherichia coli 83972]
 gi|238861327|gb|ACR63325.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|242376427|emb|CAQ31129.1| gltJ, subunit of GltIJKL glutamate ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253325406|gb|ACT30008.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972634|gb|ACT38305.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|253976828|gb|ACT42498.1| glutamate and aspartate transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|260450179|gb|ACX40601.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177802|dbj|BAI54132.1| glutamate/aspartate ABC transporter permease component [Escherichia
           coli SE15]
 gi|284920454|emb|CBG33515.1| glutamate/aspartate ABC transporter, permease protein [Escherichia
           coli 042]
 gi|291428502|gb|EFF01527.1| glutamate Aspartate transport system permease gltJ [Escherichia
           coli FVEC1412]
 gi|291471958|gb|EFF14441.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B354]
 gi|294491275|gb|ADE90031.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli IHE3034]
 gi|298279389|gb|EFI20897.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli FVEC1302]
 gi|299878151|gb|EFI86362.1| putative ATP synthase F0, A subunit [Escherichia coli MS 196-1]
 gi|300298396|gb|EFJ54781.1| putative ATP synthase F0, A subunit [Escherichia coli MS 185-1]
 gi|300396148|gb|EFJ79686.1| putative ATP synthase F0, A subunit [Escherichia coli MS 69-1]
 gi|300400464|gb|EFJ84002.1| putative ATP synthase F0, A subunit [Escherichia coli MS 84-1]
 gi|300407262|gb|EFJ90800.1| putative ATP synthase F0, A subunit [Escherichia coli MS 45-1]
 gi|300412469|gb|EFJ95779.1| putative ATP synthase F0, A subunit [Escherichia coli MS 115-1]
 gi|300460613|gb|EFK24106.1| putative ATP synthase F0, A subunit [Escherichia coli MS 187-1]
 gi|300842688|gb|EFK70448.1| putative ATP synthase F0, A subunit [Escherichia coli MS 124-1]
 gi|301077700|gb|EFK92506.1| putative ATP synthase F0, A subunit [Escherichia coli MS 146-1]
 gi|305853684|gb|EFM54123.1| glutamate and aspartate transporter subunit [Escherichia coli
           NC101]
 gi|307552517|gb|ADN45292.1| glutamate/aspartate transport system permease [Escherichia coli ABU
           83972]
 gi|309700893|emb|CBJ00190.1| glutamate/aspartate ABC transporter, permease protein [Escherichia
           coli ETEC H10407]
 gi|310337378|gb|EFQ02516.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1827-70]
 gi|312945194|gb|ADR26021.1| glutamate and aspartate transporter subunit [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315135320|dbj|BAJ42479.1| glutamate Aspartate transport system permease [Escherichia coli
           DH1]
 gi|315255040|gb|EFU35008.1| putative ATP synthase F0, A subunit [Escherichia coli MS 85-1]
 gi|315616424|gb|EFU97041.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 3431]
 gi|320194171|gb|EFW68803.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli WV_060327]
 gi|323191286|gb|EFZ76550.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli RN587/1]
 gi|323938416|gb|EGB34670.1| inner membrane transport system [Escherichia coli E1520]
 gi|323943069|gb|EGB39228.1| inner membrane transport system [Escherichia coli E482]
 gi|323952775|gb|EGB48643.1| inner membrane transport system [Escherichia coli H252]
 gi|323963222|gb|EGB58790.1| inner membrane transport system [Escherichia coli H489]
 gi|323967601|gb|EGB63017.1| inner membrane transport system [Escherichia coli M863]
 gi|323972109|gb|EGB67323.1| inner membrane transport system [Escherichia coli TA007]
 gi|323976363|gb|EGB71453.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324114775|gb|EGC08743.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325498167|gb|EGC96026.1| glutamate and aspartate transporter subunit [Escherichia fergusonii
           ECD227]
 gi|327254339|gb|EGE65961.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli STEC_7v]
 gi|331037956|gb|EGI10176.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H736]
 gi|331044563|gb|EGI16690.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli M605]
 gi|331049945|gb|EGI22003.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli M718]
 gi|331054922|gb|EGI26931.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA206]
 gi|331060442|gb|EGI32406.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA143]
 gi|331070653|gb|EGI42016.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA280]
 gi|331080750|gb|EGI51924.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H299]
          Length = 246

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|317495050|ref|ZP_07953422.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Gemella
           moribillum M424]
 gi|316914822|gb|EFV36296.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Gemella
           moribillum M424]
          Length = 213

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 88/135 (65%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G + +P FMS  IALS  + A+++EI RSG++A+ +GQMEA  +LGL++ +  + ++LPQ
Sbjct: 79  GISFTP-FMSAIIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKFIILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+++ +P L +++++L+K SS+   VG AD++    T+ N T +     LI   IY  ++
Sbjct: 138 ALKNSLPALGNEFISLVKESSIVYFVGVADIMFAANTVKNATYETFGPYLIAAAIYFIIT 197

Query: 379 IMIALFMNRLNAKIA 393
            +++  + RL  K+A
Sbjct: 198 SVLSFLVKRLEKKLA 212


>gi|57234795|ref|YP_181163.1| His/Glu/Gln/Arg/opine ABC transporter permease [Dehalococcoides
           ethenogenes 195]
 gi|57225243|gb|AAW40300.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Dehalococcoides ethenogenes 195]
          Length = 273

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 106/186 (56%), Gaps = 20/186 (10%)

Query: 191 VFSFVLGIVLSLFAT--RLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           V S+ L ++L +F    RLS++        F+ +  + +PLL    +  F  P +++ ++
Sbjct: 68  VVSYFLMLILGMFGALGRLSKNTILRGLATFYVEIVRGIPLLVQLIWWYFAFP-VIIQSI 126

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L+F   +  Q N        P  M+++    CY  A+++EI R+G+ ++P+GQMEAA
Sbjct: 127 GQGLNFGPMMNYQAN--------PIVMAIWGMTFCY-GAYMSEIYRAGIQSIPKGQMEAA 177

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG++H +A R V+LPQA+R ++PP+ ++++ LLK++SL   V  AD+V +G       
Sbjct: 178 RSLGMSHTQAMRYVILPQALRVVLPPMGNEFIALLKDTSLVSTVAVADMVRLGREFTATN 237

Query: 361 GQAIEI 366
              IE+
Sbjct: 238 FNPIEV 243


>gi|330820726|ref|YP_004349588.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia gladioli BSR3]
 gi|327372721|gb|AEA64076.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia gladioli BSR3]
          Length = 243

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 63/85 (74%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LSCYTAAF+A    SG+  V  GQ +AA ALGLT  +A R ++LPQA+R  +
Sbjct: 108 EFLAGWLGLSCYTAAFVAGEFASGIAGVREGQWQAAAALGLTPWQAFRHIVLPQAVRIAL 167

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL  QY+NL+KNSSL +A+G A+L
Sbjct: 168 PPLFGQYMNLVKNSSLTMAIGLAEL 192



 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 72/180 (40%), Gaps = 20/180 (11%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T  LA +  + +T +G  +     S  + V  + R+Y+  FRN P LV +FF Y  
Sbjct: 17  GFGVTLGLALAAGLSSTCLGAALALAGRSRWRAVRGVARLYIGAFRNTPLLVQLFFWYFG 76

Query: 152 VLSVLPIP-------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
             ++LP          H +  P G     R  SF  L        +  +FV G   S  A
Sbjct: 77  AATLLPDEAIAWLNAQHVLPTPAGAL---RWPSFEFLAGWLGLSCYTAAFVAGEFASGIA 133

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVS 263
               R    +   AL L     F    LP  V IAL        P+ GQ+ N +  S+++
Sbjct: 134 G--VREGQWQAAAALGLTPWQAFRHIVLPQAVRIAL-------PPLFGQYMNLVKNSSLT 184


>gi|301329183|ref|ZP_07222176.1| putative ATP synthase F0, A subunit [Escherichia coli MS 78-1]
 gi|300844488|gb|EFK72248.1| putative ATP synthase F0, A subunit [Escherichia coli MS 78-1]
          Length = 259

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 124 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 183

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 184 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 243

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 244 TLVERKVRL 252



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 30  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 89

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 90  LIVQFFTWYLVIPELLP 106


>gi|104773642|ref|YP_618622.1| glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422723|emb|CAI97350.1| Glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 213

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS Y++AFIAE VRSG+ +V  GQME A + G+T+ +A R V+LPQA R +IP L +Q
Sbjct: 91  IGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIPSLGNQ 150

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  + + T Q I   ++    YL L++ ++ +M  L 
Sbjct: 151 FVNLIKNSSILAFVAGF-DLMYQGDIVASNTFQTIPSYVLVSLFYLVLTLPLSYYMQYLE 209

Query: 390 AK 391
            K
Sbjct: 210 KK 211


>gi|224371141|ref|YP_002605305.1| ABC-type amino acid transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223693858|gb|ACN17141.1| ABC-type amino acid transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 229

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 96/163 (58%), Gaps = 6/163 (3%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP-----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           VL  +  +L  + P+L Q  FI    VSP      F +  + L+ +  A+ +EI+R+G+I
Sbjct: 65  VLARIYLELIRNTPLLVQLFFIY-FVVSPTLNISRFAAAVLTLALFEGAYASEIIRAGII 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAAI+LGL+     R V+LPQA+R ++PPLTSQ ++L+K+S+L   +   D+ 
Sbjct: 124 SIPQGQWEAAISLGLSRHHTFRHVILPQAIRIMLPPLTSQMVSLVKDSALVSTIAVYDIT 183

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  I+ +T    EI L    IYL ++  ++L    +  K++
Sbjct: 184 MRGQEIMAETYLVFEIWLTIALIYLGITYTLSLVTRFMEKKLS 226


>gi|320178444|gb|EFW53412.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella boydii ATCC 9905]
 gi|332094326|gb|EGI99377.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           boydii 5216-82]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|253751794|ref|YP_003024935.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis SC84]
 gi|253753617|ref|YP_003026758.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|251816083|emb|CAZ51704.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis SC84]
 gi|251819863|emb|CAR45878.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis P1/7]
 gi|319758142|gb|ADV70084.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           JS14]
          Length = 732

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%)

Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219
           G+  NN G  LS   +T+      F  + V+GI+  +FA       R++        + +
Sbjct: 516 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 575

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+ ++ F+ +G+P L+           + + GQ + I       +F++  IALS  + A
Sbjct: 576 PLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLNSGA 618

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK+++
Sbjct: 619 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 678

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  A+G  +L   G  II +  Q+  +  I   IYL
Sbjct: 679 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 714


>gi|222153290|ref|YP_002562467.1| glutamine ABC transporter glutamine-binding protein/permease
           [Streptococcus uberis 0140J]
 gi|222114103|emb|CAR42546.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus uberis 0140J]
          Length = 724

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+  + A   S+     +       + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 532 FAIAMIIGIIFGMMAVSPSKGMRIASSIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 591

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ A+P GQMEA+ 
Sbjct: 592 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAIPAGQMEASR 632

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+ +R   + ++LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 633 SLGIPYRVTMKKIILPQAVKVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 692

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 693 QSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|146296045|ref|YP_001179816.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145409621|gb|ABP66625.1| amino acid ABC transporter membrane protein, PAAT family
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 220

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 38/235 (16%)

Query: 178 FPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLY 223
           FP L      T++  A       V G++ +LF  R+S+         F+    +  PLL 
Sbjct: 10  FPVLLKASVVTIELTAIAVTIGLVFGLIAALF--RISKLKILNLIGSFYVWLFRGTPLLL 67

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              F+ +GLP ++            P L            P F++  IAL   + A+ AE
Sbjct: 68  QIFFIYYGLPKII------------PAL----------TLPAFLAGAIALIINSGAYTAE 105

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+ ++++ +GQ EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   
Sbjct: 106 IIRAAILSIDKGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVST 165

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  +L+       +QTG+  EI +  + IYL+L+ + +   N L  ++   E +
Sbjct: 166 IGMVELMRAAQLKASQTGRDAEIYIAALIIYLALTTVFSTIFNWLEKRLGRYEGQ 220


>gi|309795478|ref|ZP_07689895.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|308120853|gb|EFO58115.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|323958406|gb|EGB54112.1| inner membrane transport system [Escherichia coli H263]
          Length = 216

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 81  FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 140

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 141 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 200

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 201 TLVERKVRL 209


>gi|261250662|ref|ZP_05943237.1| putative amino acid ABC transporter permease protein [Vibrio
           orientalis CIP 102891]
 gi|260939231|gb|EEX95218.1| putative amino acid ABC transporter permease protein [Vibrio
           orientalis CIP 102891]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 116/210 (55%), Gaps = 29/210 (13%)

Query: 191 VFSFVLGIVL---SLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F+  +G+V+   SL  ++L + F+    +  +++P+L +  ++ +G+PTL+ I+L    
Sbjct: 57  LFAMTIGLVVALPSLSDSKLLKAFNRVYVEVIRSIPVLVLLLWVYYGMPTLMDISLD--- 113

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           HF   V                    IAL+   +AF+AE+ R G+ A+ +GQ EAA +LG
Sbjct: 114 HFWAGV--------------------IALTIAESAFMAEVFRGGIQAIAKGQHEAASSLG 153

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  RLV+LPQA+R I+PPL +Q++ +LK SSL   +G +DL      ++      +
Sbjct: 154 LNYWQRMRLVILPQALRQILPPLGNQFIYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           EI    +  YL L ++++  +  L  +IA+
Sbjct: 214 EIYTFLVLEYLVLILLVSQAVRWLERRIAI 243



 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  IG +V    LS +KL+    RVYVEV R+IP LV++ ++
Sbjct: 41  LIAGFYDTISVSLLSMLFAMTIGLVVALPSLSDSKLLKAFNRVYVEVIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPIP-DH 161
           Y  + +++ I  DH
Sbjct: 101 YYGMPTLMDISLDH 114


>gi|161504172|ref|YP_001571284.1| hypothetical protein SARI_02279 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865519|gb|ABX22142.1| hypothetical protein SARI_02279 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 231 SLVERKVRL 239



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   I  GF  T  L+ +  I A +IG++ G  R   N+ ++ +  +YVE+FRN+P 
Sbjct: 18  NTTYLGWIWSGFQVTVALSITAWIIAFLIGSIFGILRTVPNRFLSGLGALYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           +V  F  Y  V  +LP
Sbjct: 78  IVQFFTWYLVVPELLP 93


>gi|218699019|ref|YP_002406648.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli IAI39]
 gi|218369005|emb|CAR16759.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli IAI39]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+L G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSLFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|317047306|ref|YP_004114954.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948923|gb|ADU68398.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  + L  +T A ++E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FSSSVVCLGLFTGARVSEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++++I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINLVIMLLM 230

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 231 SLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 69  GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G + + GI     P+  +++Y   +  GF  T  ++    I A  +G+  G  R   N+L
Sbjct: 2   GIDWNWGIFLQPAPF-GNTTYLGWLWSGFQVTIAVSCCAWIIAFFVGSFFGILRTVPNRL 60

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           ++ I   YVE+FRNIP +V  FF Y
Sbjct: 61  LSTIGTCYVELFRNIPLIVQFFFWY 85


>gi|307133279|ref|YP_003885295.1| putative ABC transporter membrane protein [Dickeya dadantii 3937]
 gi|306530808|gb|ADN00739.1| putative ABC transporter membrane protein [Dickeya dadantii 3937]
          Length = 250

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/143 (41%), Positives = 84/143 (58%), Gaps = 8/143 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    F  FG   L+   L   L+     P+LG    + G +   EF++    L+ Y+
Sbjct: 77  PLLVQLFFWYFGAAQLLPAGLMQWLNSPHVIPLLG----LNGPSF--EFLAGLFGLTLYS 130

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AAFIAE +R+G+  V  GQ  AA ALGLT  +A R V+LPQA+R  +PPL  QY+N++KN
Sbjct: 131 AAFIAEEIRAGIAGVAHGQKYAACALGLTDWQAMRYVVLPQALRIALPPLLGQYMNVIKN 190

Query: 338 SSLAVAVGFADLVSVGGTIINQT 360
           SSLA+A+G A+L      +  +T
Sbjct: 191 SSLAMAIGVAELSYASRQVETET 213



 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 73  DQGIVPYTSD----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           D+ I  + +D      Y   +  GF  T  +A + ++ AT +G ++ AGR S   L+ W+
Sbjct: 6   DESIRQWLTDWLLAPQYLQWLWQGFQVTLGIAAATVVLATALGLVLAAGRDSRTPLLRWL 65

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
              Y  +FRN P LV +FF Y     +LP
Sbjct: 66  AIAYCSLFRNTPLLVQLFFWYFGAAQLLP 94


>gi|304395668|ref|ZP_07377551.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304356962|gb|EFM21326.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++++I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVAINLVIMLLM 230

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 231 SLVERKVRL 239



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 24/147 (16%)

Query: 69  GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G + + GI     P+  +++Y   +  GF  T  ++    I A  +G+  G  R   N+L
Sbjct: 2   GIDWNWGIFLEQAPF-GNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRL 60

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           ++ I   YVE+FRNIP +V  FF Y      L  P+        +   N G+ F +  +D
Sbjct: 61  LSTIGTCYVELFRNIPLIVQFFFWY------LVAPE--------LVGENLGMWFKS-ELD 105

Query: 185 TNAKIFVFSFVLGIVLSLF-ATRLSRH 210
            N + F+ S    I L LF A R+   
Sbjct: 106 PNIQFFLSSM---ICLGLFTAARVCEQ 129


>gi|170767831|ref|ZP_02902284.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia albertii TW07627]
 gi|170123319|gb|EDS92250.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia albertii TW07627]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLAM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|238020503|ref|ZP_04600929.1| hypothetical protein GCWU000324_00385 [Kingella oralis ATCC 51147]
 gi|237867483|gb|EEP68489.1| hypothetical protein GCWU000324_00385 [Kingella oralis ATCC 51147]
          Length = 279

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 105/189 (55%), Gaps = 9/189 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI--GGSTVS-----PEFMSL 269
           + +  LYI+ F   G P  V I + Y + F   V  Q   I  G   V+       +++ 
Sbjct: 93  RTISWLYITFFR--GTPMYVQIFIWYFVWFVALVHPQHGLIVSGSEAVALRREYGAWIAG 150

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL+  T A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R ++LPQA+R ++PPL +
Sbjct: 151 CLALTANTGAYITEIFRAGIQSIDKGQMEAARSLGLTYPQAMRFIILPQALRRMLPPLAN 210

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ LLK+SSL   +   +L  V  TI  +     E +     +YL+++I ++ F + L 
Sbjct: 211 EFITLLKDSSLLAMIAVPELAYVQKTISGRYSIYEEPLYTVALVYLAMTICLSAFFSWLE 270

Query: 390 AKIALKEKK 398
            + +   +K
Sbjct: 271 KRFSTGHRK 279


>gi|146320886|ref|YP_001200597.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           98HAH33]
 gi|145691692|gb|ABP92197.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           98HAH33]
          Length = 734

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 25/216 (11%)

Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKAL 219
           G+  NN G  LS   +T+      F  + V+GI+  +FA       R++        + +
Sbjct: 518 GLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGI 577

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+ ++ F+ +G+P L+           + + GQ + I       +F++  IALS  + A
Sbjct: 578 PLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLNSGA 620

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK+++
Sbjct: 621 YIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTT 680

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  A+G  +L   G  II +  Q+  +  I   IYL
Sbjct: 681 IISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 716


>gi|224541592|ref|ZP_03682131.1| hypothetical protein CATMIT_00763 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525504|gb|EEF94609.1| hypothetical protein CATMIT_00763 [Catenibacterium mitsuokai DSM
           15897]
          Length = 232

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 106/182 (58%), Gaps = 9/182 (4%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFDKPVLG 252
           ++GI++ L  T  S+    K  KA+  LYI  ++I G P LV I + Y       +P   
Sbjct: 35  IIGIIVGLVNTLKSKSVIMKILKAIANLYI--YIIRGTPMLVQILIIYFGLGQMLRPTGF 92

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           ++  IGG+     F +  +ALS    A++AEIVR G+ AV +GQ+EAA +LGLT+ K  +
Sbjct: 93  RWLNIGGT-----FTAGTVALSLNAGAYMAEIVRGGIEAVDKGQIEAARSLGLTYGKTMK 147

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA+R+++P + +Q++  +K++SL   +G  +L +VG TI       + +I  +M 
Sbjct: 148 KIVLPQALRTMLPSIINQFIISIKDTSLLSVIGLTELTNVGKTIAATQSAHMMVIYCFMA 207

Query: 373 IY 374
            Y
Sbjct: 208 CY 209


>gi|291280398|ref|YP_003497233.1| amino acid ABC transporter permease [Deferribacter desulfuricans
           SSM1]
 gi|290755100|dbj|BAI81477.1| amino acid ABC transporter, permease [Deferribacter desulfuricans
           SSM1]
          Length = 313

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 14/177 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L + YI   LI G P LV I + Y             FIG       F +   AL+ +
Sbjct: 148 KKLAITYIE--LIRGTPLLVQIFIFY------------FFIGTVLQLNRFTAGVAALAVF 193

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEIVR+G+ ++ RGQ EAA +LG+ + +  R ++LPQA++  IPP+  Q+++L+K
Sbjct: 194 AGAYVAEIVRAGIQSIHRGQTEAARSLGMNYFQTMRYIILPQALKRTIPPMAGQFISLIK 253

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +SSL   +   DL   G  ++  T Q  E+      +YL L+  ++     L  ++A
Sbjct: 254 DSSLVSVISITDLTKAGREVVTSTFQPFEVWFTVAALYLILTTTLSFLTQLLERRLA 310


>gi|322391787|ref|ZP_08065252.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus peroris ATCC 700780]
 gi|321145267|gb|EFX40663.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus peroris ATCC 700780]
          Length = 481

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 101/176 (57%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P           +F + + GQ + I       +F++  IALS  
Sbjct: 322 RGIPLMILAAFIFWGIP-----------NFIESLTGQQSPIN------DFVAGTIALSLN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK
Sbjct: 365 SAAYIAEIVRGGIKAVPVGQMEASRSLGISYGKTMRKIVLPQATKLMLPNFVNQFVIALK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++     RL  +I
Sbjct: 425 DTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAVFYLVIITLLTRLAKRLEKRI 480


>gi|291616687|ref|YP_003519429.1| GltJ [Pantoea ananatis LMG 20103]
 gi|291151717|gb|ADD76301.1| GltJ [Pantoea ananatis LMG 20103]
 gi|327393113|dbj|BAK10535.1| glutamate/aspartate transport system permease protein GltJ [Pantoea
           ananatis AJ13355]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FISSVVCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++++I + M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSSHAYESFTAITLAYVGINLVIMVLM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 GLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 69  GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G + + GI     P+  +++Y   +  GF  T  ++    I A  +G+  G  R   N+L
Sbjct: 2   GIDWNWGIFLEQAPF-GNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRL 60

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           ++ I   YVE+FRNIP +V  FF Y
Sbjct: 61  LSTIGTCYVELFRNIPLIVQFFFWY 85


>gi|322418599|ref|YP_004197822.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320124986|gb|ADW12546.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 233

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 105/177 (59%), Gaps = 13/177 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L+I+T  I GLP L++I   + ++F  P L       G TV PE  ++ + L+ +T+A++
Sbjct: 68  LFINT--IRGLPLLMVI---FWMYFLLPALM------GRTV-PEATTVIMGLTLFTSAYM 115

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++IVR+G+  +P+GQ EAAI+ GL   +A   ++LPQ +R++IP   +Q+++L+K++SLA
Sbjct: 116 SQIVRAGIQGIPKGQTEAAISTGLKPWQAMLYIVLPQGLRNMIPSFVNQFVSLIKDTSLA 175

Query: 342 VAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             VG ++L  VG  I N+T     EI +    +Y  L      F   L  ++A ++ 
Sbjct: 176 FIVGVSELTHVGTQINNRTMAYPTEIFIFIAAVYFVLCFAFTSFSRWLEGRLAWRKS 232


>gi|332107600|gb|EGJ08824.1| ABC transporter permease [Rubrivivax benzoatilyticus JA2]
          Length = 245

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 79/136 (58%), Gaps = 14/136 (10%)

Query: 220 PLLYISTFLIFGLPTLV------LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           PLL    F  FGLP L+       +   ++L     VL   +F        EF++    L
Sbjct: 66  PLLVQLFFWYFGLPALLPEDLLPWLNTPHELALGGLVLRWPSF--------EFLAAVTGL 117

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y+AA++ E +RSGL  VP GQ EA IALGLT  +A R V+LPQA+R  +PPL  QY+N
Sbjct: 118 VFYSAAYVGEDIRSGLRGVPAGQREAGIALGLTPWQALRHVVLPQALRIALPPLLGQYMN 177

Query: 334 LLKNSSLAVAVGFADL 349
           +LKN+SL +A+G  +L
Sbjct: 178 ILKNTSLGMAIGLLEL 193


>gi|312127065|ref|YP_003991939.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777084|gb|ADQ06570.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 220

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 116/226 (51%), Gaps = 32/226 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGL 232
           +T++  A       V G+V +LF  R+S+         F+    +  PLL    F+ +GL
Sbjct: 19  VTIELTAIAVTIGLVFGLVAALF--RISKIKVLNYIGSFYVWLFRGTPLLLQIFFIYYGL 76

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V            P L            P F++  IAL   + A+ AEI+R+ ++++
Sbjct: 77  PKIV------------PAL----------TLPAFLAGAIALIINSGAYTAEIIRAAILSI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+  
Sbjct: 115 DKGQYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRA 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                + TG+  EI +  + IYL+L+ + +   N L  ++   E++
Sbjct: 175 AQLKASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220


>gi|215485687|ref|YP_002328118.1| glutamate/aspartate transport system permease GltJ; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|312965094|ref|ZP_07779331.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 2362-75]
 gi|215263759|emb|CAS08095.1| glutamate/aspartate transport system permease GltJ; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|312290185|gb|EFR18068.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 2362-75]
          Length = 246

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSILCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|307155069|ref|YP_003890453.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7822]
 gi|306985297|gb|ADN17178.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7822]
          Length = 511

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 94/160 (58%), Gaps = 4/160 (2%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV +   + ++F  P L Q + +G     P F +  IALS   AA++AEI+R G+ 
Sbjct: 341 GTPMLVQL---FIIYFGLPALFQ-DHLGIEWSLPRFPAAVIALSLNVAAYLAEIIRGGIE 396

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ RGQ EA  +LG+T ++  + V+ PQA R I+PPL ++++ L+K++SL   +GF +L 
Sbjct: 397 SIDRGQWEACESLGMTPQQTMQDVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELF 456

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             G  I+  T +A E+ +    +YL L+ + ++    L A
Sbjct: 457 REGQLIVAVTYKAFEVYIAVALVYLILTSLSSIAFKWLEA 496



 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GTL+    +S   L+  +CR+YV+ FR  P LV +F +Y
Sbjct: 314 GTLIALALISPYSLLRLLCRIYVDFFRGTPMLVQLFIIY 352


>gi|303229872|ref|ZP_07316648.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-134-V-Col7a]
 gi|303232148|ref|ZP_07318851.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302513254|gb|EFL55293.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302515428|gb|EFL57394.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 216

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 119/215 (55%), Gaps = 17/215 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+   A    F F++G+++SL     +R  +    + +   Y+   +I G P LV I  
Sbjct: 19  MTIKITAVAVSFGFIIGLIVSL-----ARMSNFVIVRLIAKCYVD--VIRGTPMLVQI-- 69

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P       I G+ + P +++   A S  + A+++EI R+G+ +V +GQMEA 
Sbjct: 70  -FMIYFALPQ------IIGTRIDP-YIAACAACSINSGAYVSEIFRAGIQSVNKGQMEAG 121

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R +++PQA ++ IPPL ++++ +LK+SSL   +GF +L+  G  II +T
Sbjct: 122 RSLGLSWWQTMRFIIIPQAFKASIPPLGNEFIAMLKDSSLVSVIGFEELMRRGQLIIAKT 181

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             A EI      IYL ++I I+  +  L  K  +K
Sbjct: 182 YAATEIWGTVAIIYLCMTIPISRLVAYLERKYNVK 216


>gi|257865935|ref|ZP_05645588.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872268|ref|ZP_05651921.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257799869|gb|EEV28921.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806432|gb|EEV35254.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 717

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 29/192 (15%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  LF      A R+    +    + +P++ ++ F+ FGL   + I +   
Sbjct: 531 FALALVIGIIFGLFSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFGLSDAIGITI--- 587

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                               P+F +  I L+   +A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 588 --------------------PDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSL 627

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+  G  I+ +T Q+
Sbjct: 628 GMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQS 687

Query: 364 IEIILIWMFIYL 375
             + LI   IYL
Sbjct: 688 TYVYLIIAIIYL 699


>gi|237737255|ref|ZP_04567736.1| amino acid ABC transporter permease [Fusobacterium mortiferum ATCC
           9817]
 gi|229421117|gb|EEO36164.1| amino acid ABC transporter permease [Fusobacterium mortiferum ATCC
           9817]
          Length = 236

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 121/230 (52%), Gaps = 24/230 (10%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF----HEKTGKALPLLYISTF--- 227
           GLSF   ++ T A   +    LGI ++L   +LS HF    H K  K    L    F   
Sbjct: 23  GLSF---SVGTTALAAIIGIALGIFIALL--QLS-HFYPFKHSKNWKKFNPLSKLAFGYV 76

Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI G P +V      QL     +L    F+G    +P  +   I+    + A++AEI+R
Sbjct: 77  DLIRGTPAVV------QLM----ILANLIFVGSLRDTPILVIAAISFGINSGAYVAEIIR 126

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  + +GQMEAA ALG+ + ++ + +++PQA++ I+P L S+++ LLK +S+   +G 
Sbjct: 127 AGIEGLDKGQMEAARALGMNYGQSMKEIIIPQAVKKILPALVSEFITLLKETSIVGFIGG 186

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            DL+     I +QT + +E +L   FIYL ++ +   FM R+   + + +
Sbjct: 187 VDLLRSANIITSQTYRGVEPLLAVGFIYLIMTAVFTKFMRRVEKGLKVSD 236


>gi|319941415|ref|ZP_08015743.1| hypothetical protein HMPREF9464_00962 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805035|gb|EFW01865.1| hypothetical protein HMPREF9464_00962 [Sutterella wadsworthensis
           3_1_45B]
          Length = 221

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 84/140 (60%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P F++   A S  + A+IAEI R G+ ++ +GQ  A ++LG+T+ +  R ++LPQ
Sbjct: 83  GHRIDP-FIAAVTACSLNSGAYIAEIFRGGIQSISQGQFRAGLSLGMTYGQTMRYIVLPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A + IIPPL ++++ +LK+SSL   +GF +L   G  II +T   +EI      IYL+L+
Sbjct: 142 AFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRSGQLIIAETYGTLEIWTCVAIIYLTLT 201

Query: 379 IMIALFMNRLNAKIALKEKK 398
           + I+ F+  L  +    + +
Sbjct: 202 LTISRFVAALEKRFRKSDDR 221


>gi|238793126|ref|ZP_04636754.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia intermedia ATCC 29909]
 gi|238727499|gb|EEQ19025.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia intermedia ATCC 29909]
          Length = 245

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 50/110 (45%), Positives = 74/110 (67%), Gaps = 2/110 (1%)

Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  FIG +   P  EF++ +I L+ Y+ AFIAE +RSG+  V +GQ  AA ALGLT  ++
Sbjct: 99  EITFIGLTLGWPSFEFLAGFIGLTLYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQS 158

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 159 MRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  GF+ T W++   ++ AT++G L+ A R S  K + W    Y  +FRN P L+
Sbjct: 14  QYLNWLWQGFLLTLWISACTVVAATLLGFLLAAARDSELKALRWFAVGYSTLFRNTPLLI 73

Query: 144 VIFFLYKSVLSVLP 157
            +FF Y +    LP
Sbjct: 74  QLFFWYFAASQFLP 87


>gi|325570015|ref|ZP_08145940.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156843|gb|EGC69014.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 760

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 29/192 (15%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  LF      A R+    +    + +P++ ++ F+ FGL   + I +   
Sbjct: 574 FALALVIGIIFGLFSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFGLSDAIGITI--- 630

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                               P+F +  I L+   +A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 631 --------------------PDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSL 670

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+  G  I+ +T Q+
Sbjct: 671 GMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQS 730

Query: 364 IEIILIWMFIYL 375
             + LI   IYL
Sbjct: 731 TYVYLIIAIIYL 742


>gi|257875562|ref|ZP_05655215.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257809728|gb|EEV38548.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 712

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 103/192 (53%), Gaps = 29/192 (15%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  LF      A R+    +    + +P++ ++ F+ FGL   + I +   
Sbjct: 526 FALALVIGIIFGLFSVAPIKALRVFAGIYVDIIRGIPMMVLAFFIFFGLSDAIGITI--- 582

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                               P+F +  I L+   +A+IAEIVR G+ AVP+GQMEA+ +L
Sbjct: 583 --------------------PDFAAGVITLTLNASAYIAEIVRGGINAVPKGQMEASRSL 622

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+  G  I+ +T Q+
Sbjct: 623 GMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQS 682

Query: 364 IEIILIWMFIYL 375
             + LI   IYL
Sbjct: 683 TYVYLIIAIIYL 694


>gi|170016504|ref|YP_001727423.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
 gi|169803361|gb|ACA81979.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
          Length = 213

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 80/127 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FMS  IAL  YT+AFIAE VR+G++++  GQME A A GL+  +A + ++LPQA R  +P
Sbjct: 83  FMSGTIALMLYTSAFIAETVRAGILSIDGGQMEGARANGLSFAQAMQYIILPQAFRVALP 142

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q++NL+KNSS+   VG  DL+  G  I   T +     +I   +YL +++ ++ +M
Sbjct: 143 SLGNQFINLVKNSSILAFVGGLDLMYQGNMIAANTFETFSTYIIVGILYLIITLPLSYYM 202

Query: 386 NRLNAKI 392
             L  K+
Sbjct: 203 QHLERKL 209



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF  T   +   ++ + I+GT     ++   K V  +  VYV+VFRNIP L++ FF +
Sbjct: 14  GFGYTLLSSLIALVGSMILGTAFAIMQIVPKKWVRKVGNVYVQVFRNIPLLIITFFFF 71


>gi|21223626|ref|NP_629405.1| permease [Streptomyces coelicolor A3(2)]
 gi|256785263|ref|ZP_05523694.1| permease [Streptomyces lividans TK24]
 gi|289769154|ref|ZP_06528532.1| ABC-type amino acid transport system, permease [Streptomyces
           lividans TK24]
 gi|9968709|emb|CAC05960.1| permease [Streptomyces coelicolor A3(2)]
 gi|289699353|gb|EFD66782.1| ABC-type amino acid transport system, permease [Streptomyces
           lividans TK24]
          Length = 316

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 21/225 (9%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215
           IPD+        F ++R L+     M     I V + ++G+V  + L   RLS++     
Sbjct: 61  IPDY--------FFDDRVLT----GMGKTLLITVLAMLIGVVGGILLAVMRLSKN---PV 105

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
             ++   YI  F   G P LV + + + L   F+   LG F     S     F++  + L
Sbjct: 106 TSSIAWFYIWFFR--GTPVLVQLVVWFNLGLVFEYINLGPFYRDEWSDFMTPFLTALLGL 163

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
               AA++AEI R+GL+AV  GQ EAA ALG++H K  R +++PQAMR I+PP  ++ +N
Sbjct: 164 GLNEAAYMAEICRAGLLAVDEGQTEAAHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVIN 223

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +LK +SL   V +A+L  V   I   +G   E++ +    YL L+
Sbjct: 224 MLKTTSLVSVVQYAELFRVAQDIGQTSGAPAEMLFLAAAWYLLLT 268


>gi|329118127|ref|ZP_08246839.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465787|gb|EGF12060.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 249

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 105/189 (55%), Gaps = 9/189 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------ 270
           + L LLY++ F   G P  V I + Y +     +     ++   T + E    Y      
Sbjct: 63  RNLSLLYVTVFR--GTPLFVQIFIWYFVWLPALIHPADGWLVSGTAAVELRRNYGALIAG 120

Query: 271 -IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL+  + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL +
Sbjct: 121 VLALTANSGAYITEIFRAGIQSIDKGQMEAARSLGMTYTQAMRFVILPQAVRRMLPPLAN 180

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ LLK+SSL  A+  A+L  V  TI  +     E +     IYL++++ ++   + L 
Sbjct: 181 EFITLLKDSSLLSAIAVAELAYVQRTISGRYTVYEEPLYAIALIYLAMTLCLSWLFSSLE 240

Query: 390 AKIALKEKK 398
            + +L+  +
Sbjct: 241 KRYSLQRHR 249


>gi|296103388|ref|YP_003613534.1| glutamate/aspartate transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057847|gb|ADF62585.1| glutamate/aspartate transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 246

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FVSSMMCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230

Query: 386 NRLNAKIAL 394
           N +  KI L
Sbjct: 231 NLVERKIRL 239



 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ +  I A ++G+L G  R   N+ ++ I  +YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSIGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP               N G+ F +  +D N + FV S    + L
Sbjct: 77  LIVQFFTWYLVVPELLP--------------ENIGMWFKS-ELDPNVQFFVSSM---MCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|271499711|ref|YP_003332736.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343266|gb|ACZ76031.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 246

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S    L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAGLAIGLTLAQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFSAITLAYVGINAIIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 QIVERKTRL 239



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 16/119 (13%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I+ G   T  L+    + A ++G+L+G  R   ++L++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIISGLQVTVSLSLCAWVIAFLLGSLLGILRTVPHRLLSGIGTCYVEMFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGI 198
            +V  F  Y  V  +LP          GM+            +D N + F+ S F LG+
Sbjct: 77  LIVQFFSWYLVVPELLPT-------KLGMWFKAE--------LDPNIQFFLSSMFCLGM 120


>gi|242238548|ref|YP_002986729.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130605|gb|ACS84907.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 246

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+G+ ++PRGQ  A +ALGLT  +  R VLLP A R +IP
Sbjct: 111 FVSSMLCLGMFTAARVCEQVRAGIQSLPRGQRAAGLALGLTLPQTYRHVLLPNAYRVVIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFSAITLAYIGVNAIIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 QIVERKTRL 239



 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   ++ G   T  L+    I A ++G+L+G  R   ++L+A I   YVE+FRN+P
Sbjct: 17  GNTTYLGWLISGLQVTVALSICAWIIAFLLGSLLGIMRTVPHRLIAGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFSWYLVVPELLP 93


>gi|308186030|ref|YP_003930161.1| glutamate/aspartate transport system permease protein gltJ [Pantoea
           vagans C9-1]
 gi|308056540|gb|ADO08712.1| Glutamate/aspartate transport system permease protein gltJ [Pantoea
           vagans C9-1]
          Length = 246

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPAGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++++I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVAINLVIMLLM 230

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 231 SLVERKVRL 239



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 69  GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G + + GI     P+  +++Y   +  GF  T  ++    I A  +G+  G  R   N+L
Sbjct: 2   GIDWNWGIFLEQAPF-GNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRL 60

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           ++ I   YVE+FRNIP +V  FF Y
Sbjct: 61  LSTIGTCYVELFRNIPLIVQFFFWY 85


>gi|238854964|ref|ZP_04645294.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 269-3]
 gi|260664249|ref|ZP_05865102.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii SJ-7A-US]
 gi|282931675|ref|ZP_06337168.1| putative glutamine transport system permease protein GlnP
           [Lactobacillus jensenii 208-1]
 gi|313472444|ref|ZP_07812936.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus jensenii 1153]
 gi|238832754|gb|EEQ25061.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 269-3]
 gi|239530141|gb|EEQ69142.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus jensenii 1153]
 gi|260562135|gb|EEX28104.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii SJ-7A-US]
 gi|281304286|gb|EFA96395.1| putative glutamine transport system permease protein GlnP
           [Lactobacillus jensenii 208-1]
          Length = 212

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 79/124 (63%), Gaps = 2/124 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS YT+AFIAE +R+G+ +V  GQME A + G+T+ +A R V+LPQA +  IP L +Q
Sbjct: 90  IGLSLYTSAFIAECIRAGINSVGEGQMEGARSNGMTYVQAMRFVILPQAFKVAIPSLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I   + Q +   L+    YL L++ ++ +M  L 
Sbjct: 150 FINLIKNSSVLAFVAGF-DLMYQGDVIAFSSFQTVNTYLVVGCCYLVLTLPLSYYMRYLE 208

Query: 390 AKIA 393
            KIA
Sbjct: 209 KKIA 212



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  ++   +  + ++GT+     +  NK V  I   Y+E+FRNIP LV+    
Sbjct: 12  LLSGFGVTVMISIISLCASLVLGTVFAIMEVVPNKTVQIIAHSYIELFRNIPLLVITMIF 71

Query: 149 Y 149
           Y
Sbjct: 72  Y 72


>gi|170719628|ref|YP_001747316.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169757631|gb|ACA70947.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 320

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 17/209 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I + Y      
Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY------ 178

Query: 249 PVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                  FIG    +S EF  +  AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL  
Sbjct: 179 ------FFIGTVLNLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNA 231

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI 
Sbjct: 232 SQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIW 291

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +YL +++ ++   +RL  ++A  +
Sbjct: 292 FCVAGLYLLINLPLSHLASRLERRLAQSD 320


>gi|212640609|ref|YP_002317129.1| glutamine ABC transporter permease [Anoxybacillus flavithermus WK1]
 gi|212562089|gb|ACJ35144.1| ABC-type glutamine transport system, permease component
           [Anoxybacillus flavithermus WK1]
          Length = 218

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 81/121 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+LS   AA+IAEI R+G+ ++ RGQMEAA +LG+TH +A R ++LPQA++ +IPPL ++
Sbjct: 95  ISLSLNAAAYIAEIFRAGIQSIDRGQMEAARSLGMTHVQAMRYIILPQAIKRMIPPLGNE 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSLA  +   +L+  G  +  Q  +  E  L    IYL L++ ++  ++RL  
Sbjct: 155 FVVLIKDSSLAAIIAAPELMYWGRAMQGQYYRVWEPYLTVALIYLVLTLSLSKLLHRLER 214

Query: 391 K 391
           +
Sbjct: 215 R 215



 Score = 36.6 bits (83), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 36/72 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA   L G + T  L+  G++  TI+G  +G G++  N+LV      YV  FR  P  V
Sbjct: 11  EYAPFFLKGVLWTIGLSLIGILFGTILGLAIGLGKMVQNRLVRLPFDWYVHFFRGTPLFV 70

Query: 144 VIFFLYKSVLSV 155
            I  ++  V+ +
Sbjct: 71  QILLIHFGVMPM 82


>gi|77411077|ref|ZP_00787431.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae CJB111]
 gi|77162900|gb|EAO73857.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae CJB111]
          Length = 727

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+     +Q     P+              +F++  IALS  
Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK
Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +  ++     RL  ++
Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726


>gi|326315178|ref|YP_004232850.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323372014|gb|ADX44283.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 260

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +T +  PL ++S F I+   G P LV I   Y   F  PVL     + G  + P+F +  
Sbjct: 81  RTARWTPLRWVSRFYIWVIRGTPLLVQILFVY---FALPVL-----VPGLNL-PDFAAAV 131

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +E +R+GL+AVPRGQ EAA ALGL+       V+ PQA +  +PPL S 
Sbjct: 132 VALGLNVGAYNSEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVFPQAFKISLPPLVSN 191

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           ++ LLK+SSLA A+G  +L +VG  I + T Q I  +
Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGNRIQSATFQPIATL 228


>gi|270293188|ref|ZP_06199399.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279167|gb|EFA25013.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 225

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 108/202 (53%), Gaps = 14/202 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+L IVL +F   LS   H+   + L  +++  +     P LV   + +   +  P++ 
Sbjct: 31  SFILAIVLGIFFGVLSTSKHQIL-RILARIFVEFYQ--NTPLLVQFVIVF---YGLPLIS 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +      + + P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A R
Sbjct: 85  EH-----TIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMR 139

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    
Sbjct: 140 LIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAAL 199

Query: 373 IYLSLSIMIALF---MNRLNAK 391
           +Y +L   +A F   M R N K
Sbjct: 200 LYFALCFPVAQFGRKMERANKK 221


>gi|24379910|ref|NP_721865.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|24377889|gb|AAN59171.1|AE014984_6 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
          Length = 234

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 8/149 (5%)

Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           + P+L QF F+         G+ +   F +  + +  Y  A+IAE++RSG+ AVPRGQ E
Sbjct: 75  NTPLLVQFVFVYYGLAIMTNGAVMISAFFTAVLCVGIYHGAYIAEVIRSGIEAVPRGQTE 134

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA++ G T+++   L++LPQA+R+I+PP+T+Q +NL+KN+S    +  AD++        
Sbjct: 135 AALSQGFTYQETMSLIILPQAIRTILPPMTNQVVNLIKNTSTVAIISGADIMFTAKAWAY 194

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +T   I       F+Y  +   +A +  R
Sbjct: 195 ETTNYIPAFAGAAFLYFIMCFPLATWARR 223



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T  ++   ++ + I+G + GA   S  KL+  I RVYVE+F+N P LV   F+Y
Sbjct: 27  LKGFFYTLEMSVFALLLSLILGVIFGAMSSSKTKLLKGIARVYVEIFQNTPLLVQFVFVY 86


>gi|22537609|ref|NP_688460.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|25011575|ref|NP_735970.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae NEM316]
 gi|76797646|ref|ZP_00779916.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae 18RS21]
 gi|77405223|ref|ZP_00782321.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae H36B]
 gi|77414125|ref|ZP_00790292.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 515]
 gi|22534494|gb|AAN00333.1|AE014259_4 glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|24413114|emb|CAD47192.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae NEM316]
 gi|76587007|gb|EAO63495.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae 18RS21]
 gi|77159836|gb|EAO70980.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 515]
 gi|77176225|gb|EAO78996.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae H36B]
          Length = 727

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+     +Q     P+              +F++  IALS  
Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK
Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +  ++     RL  ++
Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726


>gi|290473277|ref|YP_003466143.1| putative glutamate/aspartate ABC transporter membrane protein
           [Xenorhabdus bovienii SS-2004]
 gi|289172576|emb|CBJ79345.1| putative glutamate/aspartate transport protein (ABC superfamily,
           membrane) [Xenorhabdus bovienii SS-2004]
          Length = 245

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 69/101 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ Y+A F+AE +R+G+  + RGQ  AA ALGLT  +A R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTLYSAPFVAEELRAGIQGIGRGQKYAAHALGLTDWQAMRYVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           PPL  QY+N++KNSSL +A+G A+L      +  Q+ Q  E
Sbjct: 173 PPLLGQYMNIVKNSSLTMAIGVAELSYASRQVETQSLQTFE 213



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q I  +     Y   +  GF+ T WL+   +I +T++G ++ A R S  K + W+   Y
Sbjct: 3   EQFITEHLLAPEYLRWLWQGFLITLWLSVCTIISSTLLGFMITAARDSQIKPLRWLVTAY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP 157
             VFRN P LV +FF Y +   +LP
Sbjct: 63  TTVFRNTPLLVQLFFWYFASGQILP 87


>gi|319745422|gb|EFV97729.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 727

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+     +Q     P+              +F++  IALS  
Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK
Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +  ++     RL  ++
Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726


>gi|76788581|ref|YP_330104.1| polar amino acid ABC transporter permease/substrate-binding protein
           [Streptococcus agalactiae A909]
 gi|76563638|gb|ABA46222.1| polar amino acid uptake (PAAT) family ABC transporter,
           substrate-binding/permease protein [Streptococcus
           agalactiae A909]
          Length = 727

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+     +Q     P+              +F++  IALS  
Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK
Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +  ++     RL  ++
Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726


>gi|14211227|gb|AAK57382.1|AF372619_1 GlnP [Streptococcus agalactiae COH1]
          Length = 727

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+     +Q     P+              +F++  IALS  
Sbjct: 568 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI-------------NDFVAATIALSLN 610

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK
Sbjct: 611 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLK 670

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +  ++     RL  ++
Sbjct: 671 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRL 726


>gi|311280449|ref|YP_003942680.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749644|gb|ADO49396.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 246

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 230

Query: 386 NRLNAKIAL 394
           N +  K+ L
Sbjct: 231 NLVERKVRL 239



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ +  I A I+G+L G  R   ++ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTVALSITAWIIAFIVGSLFGILRTVPHRALSSLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  +  +LP               N G  F +  +D N + FV S    + L
Sbjct: 77  LIVQFFTWYLVIPELLP--------------ENIGTWFKS-ELDPNIQFFVSSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|213022683|ref|ZP_03337130.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 235

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 68/100 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWE 210



 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   +  GF  T  L+ +  I A ++G++ G  R   N+ ++ +  +YVE+FRN+P 
Sbjct: 18  NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGLGTLYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           +V  F  Y  V  +LP
Sbjct: 78  IVQFFTWYLVVPELLP 93


>gi|269963235|ref|ZP_06177569.1| polar amino acid ABC transporter, permease protein [Vibrio harveyi
           1DA3]
 gi|269832040|gb|EEZ86165.1| polar amino acid ABC transporter, permease protein [Vibrio harveyi
           1DA3]
          Length = 265

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 19/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     +    +T+  +A    F+ V+G     F T L R  + K G 
Sbjct: 43  VPDYIAFYEDGEWWPAELVDGLIVTLKISAISLFFTLVIG-----FVTALLRLSNSKVGN 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+   Y+   +I   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 98  AIGTTYVE--MIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R+GL ++P+GQ EAA  LGL+   A + V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAKTLGLSPFFAYKDVILPQVLQRTLPPLTNEVVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SS+   +   DL +    I+++T    EI      IYL+L++ ++     L  K+    +
Sbjct: 204 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263

Query: 398 K 398
           K
Sbjct: 264 K 264


>gi|187925334|ref|YP_001896976.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187716528|gb|ACD17752.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 246

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L  +TAA + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FSSSIICLGLFTAARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTIAYMLINLVVMQLM 230

Query: 386 NRLNAKIAL 394
             + AK  L
Sbjct: 231 RWVEAKTRL 239



 Score = 43.9 bits (102), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L GF  T  ++ S  + A I+G+L G  R   NK  + I  +YV +FRNIP
Sbjct: 18  EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIGTLYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 78  LIVQFFIWYLVIPELLP 94


>gi|290580110|ref|YP_003484502.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254997009|dbj|BAH87610.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 240

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 8/149 (5%)

Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           + P+L QF F+         G+ +   F +  + +  Y  A+IAE++RSG+ AVPRGQ E
Sbjct: 81  NTPLLVQFVFVYYGLAIMTNGAVMISAFFTAVLCVGIYHGAYIAEVIRSGIEAVPRGQTE 140

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA++ G T+++   L++LPQA+R+I+PP+T+Q +NL+KN+S    +  AD++        
Sbjct: 141 AALSQGFTYQETMSLIILPQAIRTILPPMTNQVVNLIKNTSTVAIISGADIMFTAKAWAY 200

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +T   I       F+Y  +   +A +  R
Sbjct: 201 ETTNYIPAFAGAAFLYFIMCFPLATWARR 229



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T  ++   ++ + I+G + GA   S  KL+  I RVYVE+F+N P LV   F+Y
Sbjct: 33  LKGFFYTLEMSVFALLLSLILGVIFGAMSSSKTKLLKGIARVYVEIFQNTPLLVQFVFVY 92


>gi|253687584|ref|YP_003016774.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754162|gb|ACT12238.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 224

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G++++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGILSISRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   FIY   SI  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFIFSISASML 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  +  + ++   + GT++   RLS  K ++W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVVTLKITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLV 78

Query: 152 VLSVL 156
           V S+L
Sbjct: 79  VPSLL 83


>gi|330815542|ref|YP_004359247.1| hypothetical protein bgla_1g05980 [Burkholderia gladioli BSR3]
 gi|327367935|gb|AEA59291.1| hypothetical protein bgla_1g05980 [Burkholderia gladioli BSR3]
          Length = 246

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTEWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMAFM 230

Query: 386 NRLNAKIAL 394
             + AK  L
Sbjct: 231 RWVEAKTRL 239



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L GF  T  ++ +  + A I+G+L G  R   ++ ++ I  +YV +FRNIP
Sbjct: 18  EPTTYLGWLLSGFWVTIKVSLAAWVIALIVGSLFGVLRTVQDRRLSAIGTLYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFVWYLVVPELLP 94


>gi|294637496|ref|ZP_06715782.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella
           tarda ATCC 23685]
 gi|291089328|gb|EFE21889.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella
           tarda ATCC 23685]
          Length = 246

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + A+PRGQ  A +ALG T  +  R VLLP A R I+P
Sbjct: 111 FVSSLLCLGLFTAARVCEQVRAAINALPRGQKNAGLALGFTLAQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++ ++ L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLLDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGM 230

Query: 386 NRLNAKIAL 394
           + L  ++ L
Sbjct: 231 HLLERRLQL 239


>gi|315612723|ref|ZP_07887634.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315314833|gb|EFU62874.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 225

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 43/238 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI+  + +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
              PLL     + +GLP +           D  ++            P + +  + +  Y
Sbjct: 68  ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+K
Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           N+S    +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G + G    S ++++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH+I++P
Sbjct: 80  ----LPLISDHTIMIP 91


>gi|328956870|ref|YP_004374256.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp.
           17-4]
 gi|328673194|gb|AEB29240.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp.
           17-4]
          Length = 215

 Score = 94.0 bits (232), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 43/90 (47%), Positives = 64/90 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE VR+G++ VP+GQ EA ++ GLT  +  R ++LPQA + +IPPL +Q
Sbjct: 90  IGLTIYTSAFIAETVRAGIMGVPKGQTEAGLSTGLTQNETMRYIILPQAFKIVIPPLGNQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++NL+KNSS+   V   DL+  G  I ++T
Sbjct: 150 FINLVKNSSVLAMVTGLDLMYQGDLIASET 179



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++Y   ++ GF+NT + +   +  + IIGTL+   +LS  K +  +   YVE F+NIP L
Sbjct: 6   TTYQDVLIDGFLNTLYSSIIALFFSLIIGTLMAISQLSKKKWLKRLANAYVEFFKNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|251790534|ref|YP_003005255.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247539155|gb|ACT07776.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 246

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S    L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAGLAIGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFSAITLAYVGINAIIMLLM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 QIVERKTRL 239



 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 43/77 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I+ G   T  L+    I A ++G+L+G  R   ++L++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIISGLQVTVSLSLCAWIIAFLLGSLLGILRTVPHRLLSGIGTCYVEMFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFSWYLVIPELLP 93


>gi|313892004|ref|ZP_07825605.1| glutamine ABC transporter, permease protein GlnP [Dialister
           microaerophilus UPII 345-E]
 gi|329121000|ref|ZP_08249631.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
 gi|313119647|gb|EFR42838.1| glutamine ABC transporter, permease protein GlnP [Dialister
           microaerophilus UPII 345-E]
 gi|327471162|gb|EGF16616.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
          Length = 213

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 96/163 (58%), Gaps = 10/163 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   F  P+      I G  V P F++   A    + A+++EI+R+G
Sbjct: 60  IRGTPLLVQIFLIY---FALPM------ISGHRVDP-FLAAVTACGINSGAYVSEIIRAG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++  GQMEA  +LGLT  +    ++LPQA+R+I+PPL ++++ +LK+SSL   +GF +
Sbjct: 110 IQSIDIGQMEAGRSLGLTWWQTMYHIILPQALRNILPPLGNEFIAMLKDSSLVSVIGFEE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L   G  II QT  + EI L   F+YL +++ I+  ++ L  +
Sbjct: 170 LTRRGQLIIAQTYGSFEIWLTVAFLYLVMTLAISRLVSFLERR 212


>gi|156977165|ref|YP_001448071.1| ABC transporter ATP-binding/permease protein [Vibrio harveyi ATCC
           BAA-1116]
 gi|156528759|gb|ABU73844.1| hypothetical protein VIBHAR_05951 [Vibrio harveyi ATCC BAA-1116]
          Length = 265

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 123/241 (51%), Gaps = 19/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     +    +T+  +A    F+ V+G+V +L   RLS   + K G 
Sbjct: 43  VPDYIAFYEEGEWWPAELIEGLIVTLKISAISLFFTLVIGLVTALL--RLS---NSKVGN 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+   Y+   LI   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 98  AIGTTYVE--LIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R+GL ++P+GQ EA  +LGL+   A + V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEATKSLGLSPLFAYKDVILPQVLQRTLPPLTNEVVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SS+   +   DL +    I+++T    EI      IYL+L++ ++     L  K+    +
Sbjct: 204 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263

Query: 398 K 398
           K
Sbjct: 264 K 264


>gi|104784003|ref|YP_610501.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95112990|emb|CAK17718.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 320

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 15/208 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I + Y   F  
Sbjct: 128 ISVISGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            VL          +S EF  +  AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL   
Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNGS 232

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI  
Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +YL +++ ++   +RL  ++A  +
Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320


>gi|222081097|ref|YP_002540460.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725776|gb|ACM28865.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 223

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 84/140 (60%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++ P F++ +IALS  + AF AE+ R G+I++ RGQ EAA ALG+   +  R ++LPQ
Sbjct: 85  GVSLDP-FVAAWIALSIQSGAFFAEVFRGGIISIERGQWEAARALGMRGGRIMRRIILPQ 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R +IPPL  +   L+K +SLA  + + DLV     + +QT + +E       ++ S+ 
Sbjct: 144 ALRRMIPPLMERSFELVKTTSLAATLAYGDLVYQAMVVTSQTYRPLETYTTVAVLFFSVL 203

Query: 379 IMIALFMNRLNAKIALKEKK 398
            + +L M  + A++A   K+
Sbjct: 204 FVASLGMRAVEARLARYHKR 223


>gi|224826756|ref|ZP_03699856.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224600976|gb|EEG07159.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 247

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 9/205 (4%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK- 248
           ++ + +LG VL +      R    KT   +   Y+  F    +P LV + + Y L  D  
Sbjct: 40  WIIALILGSVLGVM-----RTLPNKTASGIATAYVELFR--NVPLLVQLFVWYFLVPDLL 92

Query: 249 PVLGQFNFIGG-STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P   Q  F    S  +  ++S+ + L  +TAA + E VR+G+ A+P+GQ  AA+A+G   
Sbjct: 93  PERAQIWFKQDLSPATSAYLSVVVCLGLFTAARVCEQVRTGVQALPKGQNYAAMAMGFQQ 152

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++        +    E  
Sbjct: 153 AQIYRYVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAF 212

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
            +   IY  L++ +  FM  +  ++
Sbjct: 213 TLATVIYFVLNMSLMKFMGWVETRL 237



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +A +G I A I+G+++G  R   NK  + I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 35  VALAGWIIALILGSVLGVMRTLPNKTASGIATAYVELFRNVPLLVQLFVWYFLVPDLLP 93


>gi|156741440|ref|YP_001431569.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
 gi|156232768|gb|ABU57551.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
          Length = 403

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 111/205 (54%), Gaps = 19/205 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SF LG++L+L      R         L ++YI   LI G+P    I++ +      P+
Sbjct: 211 VLSFPLGVLLAL-----GRQSKLPVIHWLCVIYIE--LIRGVP---FISVLFMAQLMLPL 260

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+ G T+    +     +  ++AA++AE VR GL ++PRGQ EAA ALGL+  K 
Sbjct: 261 -----FLPGVTID-RVVRAMAGVIIFSAAYLAENVRGGLQSIPRGQYEAARALGLSAWKM 314

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367
           T L++LPQA+R++IP L  Q++ L K++SL V VG  DL+ +  T++ Q    G   E+ 
Sbjct: 315 TLLIILPQALRAVIPILVGQFIALFKDTSLVVIVGLLDLMGIARTVLAQPDFLGLQAEVY 374

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
               F+Y     +++ F  RL A++
Sbjct: 375 TFVAFVYGVFCYLMSAFSQRLEAQL 399


>gi|317494653|ref|ZP_07953065.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917255|gb|EFV38602.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 246

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 105/192 (54%), Gaps = 20/192 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFG--- 231
           +T+  +A   V S +LG++L+      SR        +    +  PLL    F  FG   
Sbjct: 25  ITLVISACTIVLSTILGLILAALRDSSSRWLSLPVIAYSSVFRNTPLLVQLFFWYFGAGQ 84

Query: 232 -LPTLVLIALK--YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            LP++V+  L   ++  FD   +   +F        EF++  + L+ Y+AAFI+E +R+G
Sbjct: 85  LLPSVVMQWLNTPHEWMFDGWTIAWPSF--------EFLAGLVGLTLYSAAFISEEIRAG 136

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  V  GQ +A+ ALGL+  ++ R V+LPQA++  +PPL  QY+N++KNSSL +A+G A+
Sbjct: 137 IRGVASGQKQASQALGLSLWQSMRYVVLPQAVKIALPPLLGQYMNIIKNSSLTMAIGVAE 196

Query: 349 LVSVGGTIINQT 360
           L      +  +T
Sbjct: 197 LSYASRQVETET 208



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 40/198 (20%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  GF+ T  ++   ++ +TI+G ++ A R S+++ ++     Y  VFRN P LV
Sbjct: 14  QYLHWLWSGFLITLVISACTIVLSTILGLILAALRDSSSRWLSLPVIAYSSVFRNTPLLV 73

Query: 144 VIFFLYKSVLSVLPIPDHSIVL-----PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            +FF Y     +LP    S+V+     P     +   +++P+           F F+ G+
Sbjct: 74  QLFFWYFGAGQLLP----SVVMQWLNTPHEWMFDGWTIAWPS-----------FEFLAGL 118

Query: 199 V-LSLFAT-----------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           V L+L++            R      ++  +AL L    +     LP  V IAL      
Sbjct: 119 VGLTLYSAAFISEEIRAGIRGVASGQKQASQALGLSLWQSMRYVVLPQAVKIAL------ 172

Query: 247 DKPVLGQF-NFIGGSTVS 263
             P+LGQ+ N I  S+++
Sbjct: 173 -PPLLGQYMNIIKNSSLT 189


>gi|297619594|ref|YP_003707699.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus voltae A3]
 gi|297378571|gb|ADI36726.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus voltae A3]
          Length = 232

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/194 (36%), Positives = 111/194 (57%), Gaps = 18/194 (9%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           KI VFS +LGIVL +F    R+S +F  ++  ++   YI   LI G P LV I + Y   
Sbjct: 36  KITVFSIILGIVLGVFVGVGRISSNFIYRSFSSV---YIE--LIRGTPMLVQIMIIY--- 87

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P LG  N          F++  +AL   + A+I EI+++G+++V  GQMEAA +LG+
Sbjct: 88  FGLPDLG-INL-------DAFLAGVLALGLNSGAYIGEIIKAGILSVHHGQMEAARSLGM 139

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + +A R ++LPQA R+++P L ++++ LLK+SSL   +   +L+ VG  +   T  A  
Sbjct: 140 NYFQAMRHIILPQAFRNVLPALGNEFIILLKDSSLLSVIAIVELLRVGDQVRGSTYNAWT 199

Query: 366 IILIWMFIYLSLSI 379
            +L     YL ++I
Sbjct: 200 PLLGVALFYLLMTI 213


>gi|323127536|gb|ADX24833.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 725

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+  + A       RL         + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 533 FAIAMIIGIIFGMMAVSPTKSLRLISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 592

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 593 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 633

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL +    R V+LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 634 SLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 693

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 694 QSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724


>gi|297206367|ref|ZP_06923762.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|297149493|gb|EFH29791.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 212

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 79/124 (63%), Gaps = 2/124 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS YT+AFIAE +R+G+ +V  GQME A + G+T+ +A R V+LPQA +  IP L +Q
Sbjct: 90  IGLSLYTSAFIAECIRAGINSVGDGQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I   + Q +   L+    YL L++ ++ +M  L 
Sbjct: 150 FINLIKNSSVLAFVAGF-DLMYQGDVIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLE 208

Query: 390 AKIA 393
            KIA
Sbjct: 209 KKIA 212



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  ++   +  + I+GT+     +  NK+   +   Y+E+FRNIP LV+    
Sbjct: 12  LLSGFGVTIMISIISLCASLILGTVFAIMEVVPNKIAQAVAHTYIELFRNIPLLVITMIF 71

Query: 149 Y 149
           Y
Sbjct: 72  Y 72


>gi|183597012|ref|ZP_02958505.1| hypothetical protein PROSTU_00244 [Providencia stuartii ATCC 25827]
 gi|188023668|gb|EDU61708.1| hypothetical protein PROSTU_00244 [Providencia stuartii ATCC 25827]
          Length = 250

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/98 (48%), Positives = 69/98 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ YT  FIAE +RSG+  V +GQ  AA ALGLT  +A + V+LPQA++  +
Sbjct: 118 EFLAGFIGLTLYTVPFIAEEIRSGIRGVRQGQKYAAFALGLTGWQAMKHVVLPQAVKIAM 177

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PPL  QY+N++KNSSL +A+G A+L  V   + +QT Q
Sbjct: 178 PPLLGQYMNVVKNSSLTMAIGVAELSYVSRQVESQTLQ 215



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T W++   +I AT++G +V A R S    + WI  VYV VFRN P LV +FF Y
Sbjct: 27  GFLLTLWISICTIIAATLLGFVVAAARDSQIAPLRWIVGVYVSVFRNTPLLVQLFFWY 84


>gi|329116944|ref|ZP_08245661.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907349|gb|EGE54263.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 234

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 77/116 (66%), Gaps = 8/116 (6%)

Query: 243 QLHFDKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +L+ + P+L Q  F+         G  +   FM+  + +  Y  A+IAE++RSG+ +VPR
Sbjct: 71  ELYQNTPLLVQLVFVFYGLAIITHGHLMISTFMTAVLCVGIYHGAYIAEVIRSGIESVPR 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           GQ+EAA++ G T+ +   L++LPQA+R+I+PP+T+Q +NL+KN+S+   +  AD++
Sbjct: 131 GQIEAALSQGFTYEQTMSLIVLPQALRTILPPMTNQVVNLIKNTSIVAIISGADIM 186


>gi|251782718|ref|YP_002997021.1| glutamine-binding protein/glutamine transportsystem permease
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242391348|dbj|BAH81807.1| glutamine-binding protein/glutamine transportsystem permease
           protein [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 725

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+  + A       RL         + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 533 FAIAMIIGIIFGMMAVSPTKSLRLISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQ 592

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 593 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 633

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL +    R V+LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 634 SLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 693

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 694 QSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724


>gi|139473633|ref|YP_001128349.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134271880|emb|CAM30117.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|76808662|ref|YP_333448.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 1710b]
 gi|167845798|ref|ZP_02471306.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei B7210]
 gi|254260946|ref|ZP_04952000.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|254297703|ref|ZP_04965156.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|76578115|gb|ABA47590.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 1710b]
 gi|157808031|gb|EDO85201.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|254219635|gb|EET09019.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
          Length = 241

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 107 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|238753990|ref|ZP_04615349.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia ruckeri ATCC 29473]
 gi|238707742|gb|EEQ00101.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia ruckeri ATCC 29473]
          Length = 245

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 83/131 (63%), Gaps = 4/131 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ Y+ AFIAE +R+G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL  QY+N++KNSSLA+A+G A+L      +  +T +  +   +   +Y+S+  +I  +
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYISVIALIEAW 232

Query: 385 ----MNRLNAK 391
                 RL A+
Sbjct: 233 GMWRQQRLAAR 243



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y   +  GF+ T W++   ++ AT++G  + A R S  K   W    Y  +FRN P L
Sbjct: 13  SPYLGWLWDGFLLTLWISVCTVVAATLLGFFLAAARESHLKSWQWSAIAYSTLFRNTPLL 72

Query: 143 VVIFFLYKSVLSVLP 157
           + +FF Y +   +LP
Sbjct: 73  IQLFFWYFAAGQILP 87


>gi|71903722|ref|YP_280525.1| transporter [Streptococcus pyogenes MGAS6180]
 gi|71802817|gb|AAX72170.1| transporter [Streptococcus pyogenes MGAS6180]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|94988748|ref|YP_596849.1| glutamine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992573|ref|YP_600672.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS2096]
 gi|94542256|gb|ABF32305.1| glutamine-binding protein [Streptococcus pyogenes MGAS9429]
 gi|94546081|gb|ABF36128.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS2096]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|323126803|gb|ADX24100.1| amino acid ABC transporter, permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 233

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 8/157 (5%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPEFM--SLYIALSC----YTAAFIAEIVRSGLIAVPR 294
           + + + P+L Q  F + G + +S  F+  S ++   C    Y AA+IAE++RSG+ AVP+
Sbjct: 70  EFYQNTPLLVQVVFMYYGLAIISKSFIMPSAFLTTVCCVGLYHAAYIAEVIRSGIEAVPK 129

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++ G T  +   L+++PQA+R+I+PPLT+Q +NL+KN+S+   +  ADL+    
Sbjct: 130 GQTEAALSQGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTAK 189

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                T   +       F+Y  L   IA+F  R   +
Sbjct: 190 VWAYDTTYYVPAFAGAAFLYFILCFPIAIFGRRQEER 226


>gi|291454091|ref|ZP_06593481.1| permease [Streptomyces albus J1074]
 gi|291357040|gb|EFE83942.1| permease [Streptomyces albus J1074]
          Length = 286

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 20/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           IPD+        F N+R LS    T+       V   V G++L++   RLS++       
Sbjct: 34  IPDY--------FFNDRILSGVRETLILTVLSMVIGVVGGVLLAVM--RLSKN---PVVS 80

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++   YI  F   G P LV + + + L F  +   LG F     S     F++  + L  
Sbjct: 81  SIAWFYIWFFR--GTPVLVQLFVWFNLGFVFEYMNLGPFYKDEWSDFMTPFLTALLGLGL 138

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA++AEI R+GL++V  GQ EAA ALG++  K  R ++LPQAMR I+PP  ++ +N+L
Sbjct: 139 NEAAYMAEICRAGLLSVDEGQTEAAHALGMSQGKTLRRIVLPQAMRVIVPPTGNEVINML 198

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKI 392
           K +SL  AV + +L      I   +G  +E + +   W  I  S+  +   ++ R  A+ 
Sbjct: 199 KTTSLVAAVQYYELFKHAQDIGMTSGATVEALFLAATWYLILTSILSIGQYYIERYYARG 258

Query: 393 ALKE 396
           +L++
Sbjct: 259 SLRQ 262


>gi|53719421|ref|YP_108407.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|124385114|ref|YP_001026325.1| general L-amino acid transport system permease protein aapQ
           [Burkholderia mallei NCTC 10229]
 gi|126438631|ref|YP_001058920.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 668]
 gi|126450446|ref|YP_001080401.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei NCTC 10247]
 gi|126452880|ref|YP_001066163.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 1106a]
 gi|167815881|ref|ZP_02447561.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 91]
 gi|167824251|ref|ZP_02455722.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 9]
 gi|167902771|ref|ZP_02489976.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei NCTC 13177]
 gi|167911016|ref|ZP_02498107.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 112]
 gi|237812177|ref|YP_002896628.1| general L-amino acid transport system permease protein AapQ
           [Burkholderia pseudomallei MSHR346]
 gi|242316618|ref|ZP_04815634.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254179863|ref|ZP_04886462.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254188733|ref|ZP_04895244.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|52209835|emb|CAH35807.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|124293134|gb|ABN02403.1| general L-amino acid transport system permease protein aapQ
           [Burkholderia mallei NCTC 10229]
 gi|126218124|gb|ABN81630.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 668]
 gi|126226522|gb|ABN90062.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|126243316|gb|ABO06409.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei NCTC 10247]
 gi|157936412|gb|EDO92082.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|184210403|gb|EDU07446.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|237504603|gb|ACQ96921.1| general L-amino acid transport system permease protein AapQ
           [Burkholderia pseudomallei MSHR346]
 gi|242139857|gb|EES26259.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
          Length = 241

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 107 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|167894369|ref|ZP_02481771.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 7894]
 gi|167919031|ref|ZP_02506122.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei BCC215]
          Length = 241

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 107 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|254252392|ref|ZP_04945710.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124895001|gb|EAY68881.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 309

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 66/96 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALG T  ++ R V+LPQA+R  +
Sbjct: 175 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGFTPMQSLRYVVLPQAVRIAL 234

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 235 PPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 270


>gi|46579164|ref|YP_009972.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46448577|gb|AAS95231.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233002|gb|ADP85856.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 596

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 64/85 (75%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF    I LS YT+AF+AE++R+GL ++P+G +EAA + GL + +  R ++LP A R+II
Sbjct: 138 EFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYSSGLNYVQVLRTIILPMAFRAII 197

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL S++LN +KNSSLA+ VG A+L
Sbjct: 198 PPLGSEFLNNMKNSSLAMVVGVAEL 222



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 113/205 (55%), Gaps = 18/205 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+V+ +      R    +  +   LLYI   LI G P +++I   + ++F  PVL 
Sbjct: 404 SFFIGLVVGI-----GRTSDNRICRIPCLLYIE--LIRGNPLIIVI---FWIYFFIPVL- 452

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FN     T    F S  IAL+ +T A++AEIVR+G+  +P GQ+EAA + GLT  +  R
Sbjct: 453 -FN-----TFFNVFWSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTMR 506

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371
            ++LPQA++ +IP +  Q++ + K++SLA  +G  +L  V   I N+     +EI     
Sbjct: 507 RIILPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTVA 566

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
           F+Y      ++++  RL  +++ ++
Sbjct: 567 FLYFICCWSMSVYAARLERRLSPEK 591



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IG +VG GR S N++    C +Y+E+ R  P ++VIF++Y
Sbjct: 407 IGLVVGIGRTSDNRICRIPCLLYIELIRGNPLIIVIFWIY 446


>gi|94990641|ref|YP_598741.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10270]
 gi|94544149|gb|ABF34197.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10270]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|19746296|ref|NP_607432.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232]
 gi|19748486|gb|AAL97931.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|300312813|ref|YP_003776905.1| glutamate/aspartate ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300075598|gb|ADJ64997.1| ABC-type glutamate/aspartate transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 241

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 81/133 (60%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++ +F+   + L  +TAA + E VRSG+ ++PRGQ  A +ALGLT  +    VLLP AMR
Sbjct: 103 MTQQFVMAMLCLGMFTAARVCEQVRSGIESLPRGQKGAGLALGLTLGQTYLFVLLPMAMR 162

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++PPLTS++LN+ KNS++A  +G  +L + G  +++ T Q  E  +     Y+ ++I +
Sbjct: 163 IVLPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYEAFIAVTLAYMLINICV 222

Query: 382 ALFMNRLNAKIAL 394
              M  L  K +L
Sbjct: 223 MSLMRILERKTSL 235



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           ++  +Y   +L G   T  L  S  I A ++GT +G  R   N+ ++     YVE+FRN+
Sbjct: 15  STGQTYLDWLLSGLGVTVALGLSAWILALVLGTFLGILRTLPNRALSGFAACYVELFRNV 74

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           P LV IF  Y ++  +LP  D    LP
Sbjct: 75  PLLVQIFIWYFAMPELLPWGDAVKALP 101


>gi|120603262|ref|YP_967662.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120563491|gb|ABM29235.1| amino acid ABC transporter membrane protein 1, PAAT family / amino
           acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 596

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 64/85 (75%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF    I LS YT+AF+AE++R+GL ++P+G +EAA + GL + +  R ++LP A R+II
Sbjct: 138 EFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYSSGLNYVQVLRTIILPMAFRAII 197

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL S++LN +KNSSLA+ VG A+L
Sbjct: 198 PPLGSEFLNNMKNSSLAMVVGVAEL 222



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 113/205 (55%), Gaps = 18/205 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+V+ +      R    +  +   LLYI   LI G P +++I   + ++F  PVL 
Sbjct: 404 SFFIGLVVGI-----GRTSDNRICRIPCLLYIE--LIRGNPLIIVI---FWIYFFIPVL- 452

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FN     T    F S  IAL+ +T A++AEIVR+G+  +P GQ+EAA + GLT  +  R
Sbjct: 453 -FN-----TFFNVFWSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTMR 506

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371
            ++LPQA++ +IP +  Q++ + K++SLA  +G  +L  V   I N+     +EI     
Sbjct: 507 RIILPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTVA 566

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
           F+Y      ++++  RL  +++ ++
Sbjct: 567 FLYFICCWSMSVYAARLERRLSPEK 591



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IG +VG GR S N++    C +Y+E+ R  P ++VIF++Y
Sbjct: 407 IGLVVGIGRTSDNRICRIPCLLYIELIRGNPLIIVIFWIY 446


>gi|255284289|ref|ZP_05348844.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Bryantella formatexigens DSM 14469]
 gi|255265183|gb|EET58388.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Bryantella formatexigens DSM 14469]
          Length = 223

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 116/206 (56%), Gaps = 11/206 (5%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F+ ++G++++LF            GK   L  I T  +  +  + LI L Y ++F  P  
Sbjct: 29  FAMIIGLIVALF----------NVGKNRVLNLIGTIFVDAVRGVPLIVLAYFVYFGVPQA 78

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +   + G  +S    +  IALS    A++AEI+R+G+ +V +GQMEA+ +LGL++ K+ 
Sbjct: 79  AKMMNVSGFRLSA-LTAGIIALSMNCGAYMAEIIRAGIESVDKGQMEASRSLGLSYGKSM 137

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           RL+++PQA+R++IP + +Q++  LK++S+   +GF +LV+    +   T   +++  I  
Sbjct: 138 RLIIIPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKNVAGNTFMNLQVWAIVG 197

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            +Y+ + I ++    R+  ++   ++
Sbjct: 198 VMYMVVIITLSKVAKRVERRLKRGQQ 223


>gi|21910533|ref|NP_664801.1| putative glutamine ABC transporter glutamine-binding
           protein/permease protein [Streptococcus pyogenes
           MGAS315]
 gi|28895773|ref|NP_802123.1| hypothetical protein SPs0861 [Streptococcus pyogenes SSI-1]
 gi|21904733|gb|AAM79604.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pyogenes
           MGAS315]
 gi|28811022|dbj|BAC63956.1| hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|77409421|ref|ZP_00786118.1| GlnP [Streptococcus agalactiae COH1]
 gi|77171979|gb|EAO75151.1| GlnP [Streptococcus agalactiae COH1]
          Length = 469

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 27/211 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+GI+  + +   S              + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 277 FAIAMVIGIIFGMMSVSPSNTLRTISMIFVDIVRGIPLMIVAAFIFWGIPNLIESITGHQ 336

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 337 -------------------SPINDFVAATIALSLNGGAYIAEIVRGGIEAVPSGQMEASR 377

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 378 SLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 437

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   +YL +  ++     RL  ++
Sbjct: 438 QSFRMYAILAIMYLVIITLLTRLAKRLEKRL 468


>gi|307130054|ref|YP_003882070.1| membrane protein of an ABC superfamily glutamate and aspartate
           transporter [Dickeya dadantii 3937]
 gi|306527583|gb|ADM97513.1| membrane component of an ABC superfamily glutamate and aspartate
           transporter [Dickeya dadantii 3937]
          Length = 246

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S    L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R ++P
Sbjct: 111 FLSSMFCLGMFTAARVCEQVRAGIQSLPRGQKAAGLAIGLTLPQTYRYVLLPNAYRVVVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFSAITLAYIGINAIIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 QIVEHKTRL 239



 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I+ G   T  L+    + A ++G+L+G  R   N+L+A I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIISGLQVTVTLSLCAWVIAFLLGSLLGILRTVPNRLLAGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFSWYLVVPELLP 93


>gi|71910889|ref|YP_282439.1| transporter [Streptococcus pyogenes MGAS5005]
 gi|71853671|gb|AAZ51694.1| transporter [Streptococcus pyogenes MGAS5005]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|327399611|ref|YP_004340480.1| polar amino acid ABC transporter inner membrane subunit [Hippea
           maritima DSM 10411]
 gi|327182240|gb|AEA34421.1| polar amino acid ABC transporter, inner membrane subunit [Hippea
           maritima DSM 10411]
          Length = 314

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 15/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K+ + S ++ +V+  F   L R       K L ++YI   LI G P LV I + Y     
Sbjct: 121 KVSLLSIIMALVIG-FIVGLMRISDNPLFKNLAIVYIE--LIRGTPLLVQIFIIY----- 172

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   FIG       F +   AL+ +  A+IAEI+R+G+ ++PRGQ EAA+ALG+ +
Sbjct: 173 -------FFIGTIFSMTRFFAGAFALAVFEGAYIAEIIRAGIQSIPRGQTEAAVALGMNY 225

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R +++PQA++ ++P L  Q+++L+K+SSL   +   +L   G  I++ T    E+ 
Sbjct: 226 YQVMRYIIMPQAIKRVLPALAGQFISLIKDSSLLSVISLTELTKAGKEIVSSTFSPFEVW 285

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +Y  ++  ++L    L  ++A  E
Sbjct: 286 FSVAALYFIVTYTLSLLDRYLERRLAGNE 314



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)

Query: 82  DSSY-ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +SSY A  +L+G   T  ++   +I A +IG +VG  R+S N L   +  VY+E+ R  P
Sbjct: 104 NSSYKAGPLLMGLYMTIKVSLLSIIMALVIGFIVGLMRISDNPLFKNLAIVYIELIRGTP 163

Query: 141 PLVVIFFLY 149
            LV IF +Y
Sbjct: 164 LLVQIFIIY 172


>gi|209559563|ref|YP_002286035.1| Glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes NZ131]
 gi|209540764|gb|ACI61340.1| Glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes NZ131]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|226196378|ref|ZP_03791960.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|225931595|gb|EEH27600.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
          Length = 231

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 97  EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 156

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 157 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 192


>gi|50914391|ref|YP_060363.1| glutamine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
 gi|50903465|gb|AAT87180.1| Glutamine-binding protein [Streptococcus pyogenes MGAS10394]
          Length = 724

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|121606346|ref|YP_983675.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120595315|gb|ABM38754.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 221

 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 7/135 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ + +AL  +T+A IAE VR+G+ A+ RGQ  A +ALG T  +  R V+LP A R I
Sbjct: 78  PGFVLVVLALGFFTSARIAEQVRAGIQALARGQRYAGMALGFTTAQTYRYVILPMAFRII 137

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLTS+ +NLLKNSS+A AV  A+L         +T + +E       IY++++ + A+
Sbjct: 138 LPPLTSESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVE-------IYIAVTALYAI 190

Query: 384 FMNRLNAKIALKEKK 398
               +N  +AL EKK
Sbjct: 191 SAFAVNRLMALAEKK 205



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICR---VYVEVFRNIPPLVVIFFLYKSVLSVLP----IP 159
           A ++G L+G  R   N    W+ R   V+VE+FRNIP LV IF  Y  V  + P    IP
Sbjct: 21  AMVVGALMGTLRTLPNS--PWLVRLGNVWVELFRNIPLLVQIFLWYFVVPKMFPAMQQIP 78

Query: 160 DHS-IVLPFGMFLNNR 174
               +VL  G F + R
Sbjct: 79  GFVLVVLALGFFTSAR 94


>gi|163789691|ref|ZP_02184128.1| glutamine ABC transporter permease component [Carnobacterium sp.
           AT7]
 gi|159874913|gb|EDP68980.1| glutamine ABC transporter permease component [Carnobacterium sp.
           AT7]
          Length = 215

 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 43/90 (47%), Positives = 64/90 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE VR+G++ VP+GQ EA ++ GLT  +  R ++LPQA + +IPPL +Q
Sbjct: 90  IGLTIYTSAFIAETVRAGIMGVPKGQTEAGLSTGLTQNETMRYIVLPQAFKIVIPPLGNQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++NL+KNSS+   V   DL+  G  I ++T
Sbjct: 150 FINLVKNSSVLAMVTGLDLMYQGDLIASET 179



 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 42/67 (62%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++Y   ++ GF+NT + +   +  + IIGTL+   +LS NK ++ +   YVE F+NIP L
Sbjct: 6   TTYPDVLIDGFLNTLYSSIIALFFSLIIGTLMAILQLSKNKWISGLANAYVEFFKNIPLL 65

Query: 143 VVIFFLY 149
           +++ F Y
Sbjct: 66  IIVMFFY 72


>gi|319795336|ref|YP_004156976.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315597799|gb|ADU38865.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 241

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 11/170 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++ GLP L++I   +  +F  P L           + +F ++ IAL  + AA++AEIVR
Sbjct: 66  FVVRGLPLLMVI---FWAYFFLPSLTGVK-------TDQFTTMLIALVIFDAAYLAEIVR 115

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  +PRGQME A ALGL++ +A RLV+LPQA+RS++P L +Q+++ +K +SL   +G 
Sbjct: 116 AGIQGLPRGQMETARALGLSYFRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGYIIGL 175

Query: 347 ADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A++  +   I  Q   +  +I LI    Y  L   ++ F   L  ++A +
Sbjct: 176 AEVSFIATQINTQVFTKPAQIYLILGGTYFILCFGLSRFAYWLERRLARR 225


>gi|94994565|ref|YP_602663.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10750]
 gi|306827161|ref|ZP_07460451.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus pyogenes ATCC 10782]
 gi|94548073|gb|ABF38119.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10750]
 gi|304430617|gb|EFM33636.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus pyogenes ATCC 10782]
          Length = 724

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|167719669|ref|ZP_02402905.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei DM98]
          Length = 241

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 107 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 167 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 202


>gi|226315384|ref|YP_002775280.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226098334|dbj|BAH46776.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 217

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 29/208 (13%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLH 245
           F+ ++G++  L +T  S+             +  PLL    F+ FGLP ++ I +     
Sbjct: 32  FALLIGLLFGLMSTSRSKLLRGIATAYVDFLRGTPLLVQIFFIYFGLPPVLDIKI----- 86

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                             PE  +  +ALS    A++AEI R G++++ +GQMEAA +LGL
Sbjct: 87  ------------------PETTAGILALSLNAGAYLAEIFRGGILSIDKGQMEAARSLGL 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +H KA RLV+LPQA+R +IP   +Q++  LK++SL   +G  +L++ G  II+   ++ E
Sbjct: 129 SHGKAMRLVILPQAVRRMIPAFVNQFIVTLKDTSLLTVIGIRELMNSGEIIISSNFRSFE 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I  +    Y  +  +++L    L  + A
Sbjct: 189 IWAVVAVFYFLMIYILSLLSRSLERRFA 216


>gi|238765552|ref|ZP_04626465.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia kristensenii ATCC 33638]
 gi|238696230|gb|EEP89034.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia kristensenii ATCC 33638]
          Length = 245

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 83/131 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ Y+ AFIAE +RSG+  V +GQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTFYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL  QY+N++KNSSLA+A+G A+L      +  +T +  +   +   +Y+++  +I  +
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAW 232

Query: 385 MNRLNAKIALK 395
                 + A+K
Sbjct: 233 GMWRQQRTAVK 243



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ +T++G L+ A R S  K + W    Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLP 157
               LP
Sbjct: 82  ASQFLP 87


>gi|167571225|ref|ZP_02364099.1| hypothetical protein BoklC_15392 [Burkholderia oklahomensis C6786]
          Length = 246

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMSFM 230

Query: 386 NRLNAK 391
             + +K
Sbjct: 231 RWVESK 236



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLMSGFWVTVKVSLAAWLIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFVWYLVVPELLP 94


>gi|167628305|ref|YP_001678804.1| glutamine abc transporter, glutamine-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
 gi|167591045|gb|ABZ82793.1| glutamine abc transporter, glutamine-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
          Length = 220

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 20/203 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL-IFGLPTLVLIALKYQLHFDKPVL 251
           SF  GIV+   A R+SR+         P L    FL +  L  L LI L +  +F  P +
Sbjct: 36  SFFFGIVIC--ALRISRY---------PFLRYPAFLYVESLRNLPLILLIFFTYFALPKI 84

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G    +G     P+F +  +A + +T+A +AEI+R G+ +VP+GQ EAA A G T+ +  
Sbjct: 85  G----LG----LPKFWAAVVAFTIFTSALVAEIIRGGIQSVPKGQWEAARAQGFTYLETM 136

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQA+R +IPPL SQ++ L K++S A  +G  +L   G  I  +    +++     
Sbjct: 137 VYIILPQALRKMIPPLISQFITLTKDTSYASIIGLTELTEHGKLIFIEHNNPVQVFFFVA 196

Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394
            IY  ++  ++     +  ++A+
Sbjct: 197 CIYFVVNFTLSRLGMYMEKRMAI 219


>gi|322411345|gb|EFY02253.1| amino acid ABC transporter, permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 233

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 75/126 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FM+    +  Y AA+IAE++RSG+ AVP+GQ EAA++ G T  +   L+++PQA+R+I+P
Sbjct: 101 FMTTVCCVGLYHAAYIAEVIRSGIEAVPKGQTEAALSQGFTRLQTMSLIIIPQAVRTILP 160

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLT+Q +NL+KN+S+   +  ADL+         T   +       F+Y  L   IA+F 
Sbjct: 161 PLTNQVVNLIKNTSIVAIISGADLMFTAKVWAYDTTYYVPAFAGAAFLYFILCFPIAIFG 220

Query: 386 NRLNAK 391
            R   +
Sbjct: 221 RRQEER 226


>gi|222152718|ref|YP_002561894.1| amino acid ABC transporter permease [Streptococcus uberis 0140J]
 gi|222113530|emb|CAR41316.1| putative amino acid ABC transporter, permease protein
           [Streptococcus uberis 0140J]
          Length = 233

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 82/126 (65%), Gaps = 9/126 (7%)

Query: 234 TLVLIALKY-QLHFDKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEI 284
           TL  IA  Y +L+ + P+L QF F+         G  +   F +  + +  Y  A+IAE+
Sbjct: 60  TLKAIARVYVELYQNTPLLVQFVFVYYGLAIISNGLIMISTFFTAVLCVGIYHGAYIAEV 119

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ AVP+GQ+EAA++ G T+ +   L++LPQA+R+I+PP+T+Q +NL+KN+S+   +
Sbjct: 120 IRSGIEAVPKGQIEAALSQGFTYEQTMSLIVLPQAVRTILPPMTNQVVNLIKNTSVVAII 179

Query: 345 GFADLV 350
             AD++
Sbjct: 180 SGADIM 185



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            F+ T  ++F  ++ A ++G L GA   S +K +  I RVYVE+++N P LV   F+Y
Sbjct: 28  AFLYTLGMSFLALLLALVLGILFGAMSTSKHKTLKAIARVYVELYQNTPLLVQFVFVY 85


>gi|315029877|gb|EFT41809.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
          Length = 722

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           FV + ++G++  LF      A R+    +    + +PL+ ++ F+ FGLP          
Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 VLG FN        P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +L
Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +   IYL L   +      L  K+
Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721


>gi|299068866|emb|CBJ40107.1| putative amino acid transmembrane ABC transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 262

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 85/134 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +LGL+       V+ PQA +  +
Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL + +++LLK+SSLA A+G  +L +VG  +   T Q +  ++    IYL+L+ ++  F
Sbjct: 188 PPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247

Query: 385 MNRLNAKIALKEKK 398
            N +  ++ ++ ++
Sbjct: 248 SNAVEQRMDVEGRR 261


>gi|315173030|gb|EFU17047.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
          Length = 722

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           FV + ++G++  LF      A R+    +    + +PL+ ++ F+ FGLP          
Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 VLG FN        P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +L
Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +   IYL L   +      L  K+
Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721


>gi|149909833|ref|ZP_01898484.1| hypothetical amino acid ABC transporter, permease protein
           [Moritella sp. PE36]
 gi|149807165|gb|EDM67121.1| hypothetical amino acid ABC transporter, permease protein
           [Moritella sp. PE36]
          Length = 315

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 77/125 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS +T A+IAEI+RSG+ ++  GQMEAA +LG+++ KA   V+LPQA +  +PP+  Q+
Sbjct: 191 ALSVFTGAYIAEIIRSGIQSISPGQMEAARSLGMSYPKAMIYVILPQAFKRTLPPMAGQF 250

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +NL+K+SSL   +   DL   G  ++  +    E+      +YL L+  ++  + R+  +
Sbjct: 251 INLIKDSSLVSVISITDLTKAGREVVAGSFATFEVWFAVAALYLVLTSTLSFGVQRIEKR 310

Query: 392 IALKE 396
           +A  +
Sbjct: 311 LATSD 315


>gi|56807700|ref|ZP_00365576.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Streptococcus pyogenes M49
           591]
          Length = 401

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 97/176 (55%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+     +Q     P+              +F++  IALS  
Sbjct: 242 RGIPLMIVAAFIFWGVPNLIESMTGHQ----SPI-------------NDFLAATIALSLN 284

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  LK
Sbjct: 285 GGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 344

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 345 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 400


>gi|197337095|ref|YP_002157986.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11]
 gi|197314347|gb|ACH63796.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11]
          Length = 264

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 22/232 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +P  +F    G  FP   ++      KI   S +  + ++L  T L R  +   GK +  
Sbjct: 45  VPDFIFFYEDGEWFPAELIEGLLVTLKISAISAIATLTIALI-TALLRLSNSIVGKTIST 103

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYI   LI   P LV I L Y +    P LG             F +  +AL+ +  A+ 
Sbjct: 104 LYIE--LIRNTPLLVQIYLLYFVF--GPFLGL----------DRFTTAVLALALFQGAYT 149

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+RSGLI +P+GQ EA   LGL+   + R V+LPQ +R  +P LT++ ++L+KNSS+ 
Sbjct: 150 AEILRSGLINLPKGQFEACKTLGLSQFNSYRYVVLPQVIRKTLPSLTNELVSLVKNSSIV 209

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNRLN 389
             +   DL + G  I++ T    EI      I++ I LSLS + A    R++
Sbjct: 210 SVMAIFDLTTEGRNIVSDTAMPFEIWFTVAAIYLMITLSLSALSAWLEYRMH 261


>gi|29375354|ref|NP_814508.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227554876|ref|ZP_03984923.1| amino acid ABC superfamily ATP binding cassette transporter protein
           [Enterococcus faecalis HH22]
 gi|256761528|ref|ZP_05502108.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|257081023|ref|ZP_05575384.1| ABC-type amino acid transport/signal transduction protein system
           [Enterococcus faecalis E1Sol]
 gi|257083683|ref|ZP_05578044.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Fly1]
 gi|257418368|ref|ZP_05595362.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|29342814|gb|AAO80578.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227175989|gb|EEI56961.1| amino acid ABC superfamily ATP binding cassette transporter protein
           [Enterococcus faecalis HH22]
 gi|256682779|gb|EEU22474.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256989053|gb|EEU76355.1| ABC-type amino acid transport/signal transduction protein system
           [Enterococcus faecalis E1Sol]
 gi|256991713|gb|EEU79015.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Fly1]
 gi|257160196|gb|EEU90156.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|315573457|gb|EFU85648.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315581418|gb|EFU93609.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 722

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           FV + ++G++  LF      A R+    +    + +PL+ ++ F+ FGLP          
Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 VLG FN        P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +L
Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +   IYL L   +      L  K+
Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721


>gi|307296217|ref|ZP_07576045.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306496091|gb|EFM65673.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|315159996|gb|EFU04013.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
          Length = 722

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           FV + ++G++  LF      A R+    +    + +PL+ ++ F+ FGLP          
Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 VLG FN        P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +L
Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +   IYL L   +      L  K+
Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721


>gi|121593037|ref|YP_984933.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|222109805|ref|YP_002552069.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           ebreus TPSY]
 gi|120605117|gb|ABM40857.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Acidovorax sp. JS42]
 gi|221729249|gb|ACM32069.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax ebreus TPSY]
          Length = 250

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ +  AL  +T+A IAE VRSG+ A+PRGQ  A +ALG T  +  R VLLP A R I
Sbjct: 109 PGFVLVVFALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTFQYYRYVLLPMAFRII 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV  A+L         +T + IE+ L       +L I+ A 
Sbjct: 169 IPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEVYL----AVTALYIISAF 224

Query: 384 FMNRLNAKIALKEK 397
            +NR+ A I  + +
Sbjct: 225 AINRIMAFIEKRTR 238



 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+ Q       D +Y   +L  +  T  ++   +  A ++G+LVG  R    +   W  R
Sbjct: 16  EVGQSCFGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVGTLRTLEGR--PWTVR 73

Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +   +VE+FRNIP LV IF  Y  V S+ P
Sbjct: 74  LGNAWVELFRNIPLLVHIFVWYHVVPSIFP 103


>gi|238923861|ref|YP_002937377.1| amino acid ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
 gi|238875536|gb|ACR75243.1| amino acid ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
          Length = 508

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 119/211 (56%), Gaps = 25/211 (11%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243
           I +F+ +LGIVL  F   + R  H++ G       +   Y++  +I G P ++ + + Y 
Sbjct: 311 ITIFAVMLGIVLG-FLIAIVRTSHDRNGGLAILNGICKAYLT--IIRGTPVMIQLLIIY- 366

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       ++  ++V+ + +   IA    +AA++AEIVRSG+++V  GQ EA  +L
Sbjct: 367 ------------YVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIGQFEAGRSL 414

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +R+  +LV++PQA+++I+P L +++++LLK +S++  +G  DL   G  I + T +A
Sbjct: 415 GLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEA 474

Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRLNA 390
               I + LI++ I + LS  ++    RL +
Sbjct: 475 FIPLIAVALIYLVIVMLLSHGVSKLERRLRS 505


>gi|227517724|ref|ZP_03947773.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX0104]
 gi|229546597|ref|ZP_04435322.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX1322]
 gi|229548704|ref|ZP_04437429.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           ATCC 29200]
 gi|255971218|ref|ZP_05421804.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|255973841|ref|ZP_05424427.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256617647|ref|ZP_05474493.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ATCC 4200]
 gi|256854374|ref|ZP_05559738.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256957372|ref|ZP_05561543.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis DS5]
 gi|256959892|ref|ZP_05564063.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Merz96]
 gi|257086118|ref|ZP_05580479.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis D6]
 gi|257089189|ref|ZP_05583550.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257415331|ref|ZP_05592325.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis AR01/DG]
 gi|257421017|ref|ZP_05598007.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293384723|ref|ZP_06630577.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis R712]
 gi|293387465|ref|ZP_06632017.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis S613]
 gi|294781574|ref|ZP_06746911.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300862075|ref|ZP_07108155.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307269814|ref|ZP_07551144.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307276261|ref|ZP_07557389.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307284476|ref|ZP_07564638.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307289545|ref|ZP_07569490.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312900356|ref|ZP_07759667.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312904217|ref|ZP_07763379.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312908578|ref|ZP_07767521.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312910503|ref|ZP_07769348.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312951870|ref|ZP_07770759.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|227074829|gb|EEI12792.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX0104]
 gi|229306170|gb|EEN72166.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           ATCC 29200]
 gi|229308287|gb|EEN74274.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX1322]
 gi|255962236|gb|EET94712.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|255966713|gb|EET97335.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256597174|gb|EEU16350.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ATCC 4200]
 gi|256709934|gb|EEU24978.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256947868|gb|EEU64500.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis DS5]
 gi|256950388|gb|EEU67020.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Merz96]
 gi|256994148|gb|EEU81450.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis D6]
 gi|256998001|gb|EEU84521.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257157159|gb|EEU87119.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ARO1/DG]
 gi|257162841|gb|EEU92801.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291077973|gb|EFE15337.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis R712]
 gi|291083116|gb|EFE20079.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis S613]
 gi|294451352|gb|EFG19817.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295114022|emb|CBL32659.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300848600|gb|EFK76357.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306499506|gb|EFM68878.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306503153|gb|EFM72407.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306507061|gb|EFM76203.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306513924|gb|EFM82526.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310625464|gb|EFQ08747.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630168|gb|EFQ13451.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310632313|gb|EFQ15596.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311289199|gb|EFQ67755.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311292544|gb|EFQ71100.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315025741|gb|EFT37673.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315031474|gb|EFT43406.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315036139|gb|EFT48071.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315145263|gb|EFT89279.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315148141|gb|EFT92157.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315151540|gb|EFT95556.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153184|gb|EFT97200.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315154902|gb|EFT98918.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315161961|gb|EFU05978.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315164648|gb|EFU08665.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315170674|gb|EFU14691.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315578044|gb|EFU90235.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|323479955|gb|ADX79394.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis 62]
 gi|327534349|gb|AEA93183.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus faecalis OG1RF]
 gi|329577603|gb|EGG59036.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 722

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           FV + ++G++  LF      A R+    +    + +PL+ ++ F+ FGLP          
Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 VLG FN        P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +L
Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +   IYL L   +      L  K+
Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721


>gi|121609959|ref|YP_997766.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554599|gb|ABM58748.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 221

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 84/129 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+ A+++EIVR  + ++ +GQMEAA +LG++  KA R ++LPQA+  +
Sbjct: 87  PAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEAARSLGMSSGKAMRTIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +  ADL+  G  II+ + +++E+ L    +YL L+ +  +
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAVALVYLVLTTLTGM 206

Query: 384 FMNRLNAKI 392
            + ++  ++
Sbjct: 207 ALQKVEQRL 215


>gi|323706491|ref|ZP_08118051.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534153|gb|EGB23944.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 220

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 87/135 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   IALS  +A ++AEI+RSG+ AV  GQMEA+ +LG++H  A R V++PQA+++I
Sbjct: 86  PGFVVGIIALSMNSAGYVAEIIRSGIQAVDPGQMEASRSLGMSHSMAMRYVIIPQAIKNI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++++ +LK SS+   +GFADL      + + T +A E ++I   IY  ++++ + 
Sbjct: 146 LPALGNEFVVMLKESSIVSVIGFADLTRQAEIVSSVTYRAFEPLIIIAAIYFVMTLVFSR 205

Query: 384 FMNRLNAKIALKEKK 398
            +++   ++   + +
Sbjct: 206 LLSKFERRLRTGDTR 220


>gi|134280169|ref|ZP_01766880.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 305]
 gi|134248176|gb|EBA48259.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 305]
          Length = 246

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFM 230

Query: 386 NRLNAK 391
             + +K
Sbjct: 231 RWVESK 236



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A ++G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLMSGFWVTVKVSLVAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  V  +LP+
Sbjct: 78  LIVQFFVWYLVVPELLPV 95


>gi|37524240|ref|NP_927584.1| hypothetical protein plu0220 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783663|emb|CAE12515.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 245

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 74/115 (64%), Gaps = 2/115 (1%)

Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + N +G S   P  EF++ +I L+ Y+A F+AE +R+G+  + RGQ  AA ALGLT  +A
Sbjct: 99  EINLLGLSLAWPSFEFLAGFIGLTLYSAPFVAEELRAGIQGIGRGQKYAAHALGLTGWQA 158

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            R V+LPQA++   PPL  QY+N++KNSSL +A+G A+L      +  +T +  E
Sbjct: 159 MRYVVLPQALKIATPPLLGQYMNIVKNSSLTMAIGVAELSYASRQVETETLKTFE 213



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  GF+ T W++   +I +T++G ++ A R S  K++ W+   Y  +FRN P LV
Sbjct: 14  QYLGWLWQGFLITLWISACTVIASTLLGFVLAAARDSQLKILRWLVTAYTTLFRNTPLLV 73

Query: 144 VIFFLYKSVLSVLP 157
            +FF Y +   +LP
Sbjct: 74  QLFFWYFASGQILP 87


>gi|256964404|ref|ZP_05568575.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis HIP11704]
 gi|307272573|ref|ZP_07553826.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|256954900|gb|EEU71532.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis HIP11704]
 gi|306510858|gb|EFM79875.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
          Length = 722

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           FV + ++G++  LF      A R+    +    + +PL+ ++ F+ FGLP          
Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 VLG FN        P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +L
Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +   IYL L   +      L  K+
Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721


>gi|238787849|ref|ZP_04631646.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia frederiksenii ATCC 33641]
 gi|238724192|gb|EEQ15835.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia frederiksenii ATCC 33641]
          Length = 245

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 68/96 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ Y+ AFIAE +RSG+  V +GQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTLYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAL 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 17/126 (13%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y + +  GF+ T W++   ++ AT++G L+ A R S  K + W    Y  +FRN P L+
Sbjct: 14  QYLSWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALQWFAIGYSTLFRNTPLLI 73

Query: 144 VIFFLYKSVLSVLP---IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV- 199
            +FF Y +   +LP   IP   +  P  + + N  LS+P+           F F+ G + 
Sbjct: 74  QLFFWYFAASQLLPTSWIP--WLNTPHEITVFNLTLSWPS-----------FEFLAGFIG 120

Query: 200 LSLFAT 205
           L+L++T
Sbjct: 121 LTLYST 126


>gi|53720531|ref|YP_109517.1| glutamate/aspartate transport system permease [Burkholderia
           pseudomallei K96243]
 gi|67643523|ref|ZP_00442268.1| glutamate/aspartate transport system permease protein GltJ
           [Burkholderia mallei GB8 horse 4]
 gi|76811358|ref|YP_334804.1| glutamate/aspartate transport system permease [Burkholderia
           pseudomallei 1710b]
 gi|121598614|ref|YP_991700.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei SAVP1]
 gi|124386224|ref|YP_001027195.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei NCTC 10229]
 gi|126439941|ref|YP_001060406.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 668]
 gi|126449942|ref|YP_001082147.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei NCTC 10247]
 gi|126454005|ref|YP_001067667.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1106a]
 gi|166998512|ref|ZP_02264370.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei PRL-20]
 gi|167721208|ref|ZP_02404444.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei DM98]
 gi|167740180|ref|ZP_02412954.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 14]
 gi|167817395|ref|ZP_02449075.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 91]
 gi|167825801|ref|ZP_02457272.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 9]
 gi|167847285|ref|ZP_02472793.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei B7210]
 gi|167895873|ref|ZP_02483275.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 7894]
 gi|167912522|ref|ZP_02499613.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 112]
 gi|167920473|ref|ZP_02507564.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei BCC215]
 gi|217420960|ref|ZP_03452465.1| polar amino acid ABC transporter, permease protein, PAAT family
           [Burkholderia pseudomallei 576]
 gi|226196826|ref|ZP_03792405.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei Pakistan 9]
 gi|237813797|ref|YP_002898248.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei MSHR346]
 gi|242316198|ref|ZP_04815214.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1106b]
 gi|254178933|ref|ZP_04885587.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei ATCC 10399]
 gi|254180662|ref|ZP_04887260.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1655]
 gi|254190905|ref|ZP_04897411.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254199044|ref|ZP_04905459.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei S13]
 gi|254202700|ref|ZP_04909063.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei FMH]
 gi|254208040|ref|ZP_04914390.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei JHU]
 gi|254261249|ref|ZP_04952303.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1710a]
 gi|254299253|ref|ZP_04966703.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 406e]
 gi|52210945|emb|CAH36933.1| glutamate/aspartate transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|76580811|gb|ABA50286.1| glutamate/aspartate transport system permease protein [Burkholderia
           pseudomallei 1710b]
 gi|121227424|gb|ABM49942.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei SAVP1]
 gi|124294244|gb|ABN03513.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei NCTC 10229]
 gi|126219434|gb|ABN82940.1| polar amino acid ABC transporter, permease protein, PAAT family
           [Burkholderia pseudomallei 668]
 gi|126227647|gb|ABN91187.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1106a]
 gi|126242812|gb|ABO05905.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei NCTC 10247]
 gi|147746947|gb|EDK54024.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei FMH]
 gi|147751934|gb|EDK59001.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei JHU]
 gi|157809165|gb|EDO86335.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 406e]
 gi|157938579|gb|EDO94249.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160694847|gb|EDP84855.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei ATCC 10399]
 gi|169656874|gb|EDS88271.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei S13]
 gi|184211201|gb|EDU08244.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1655]
 gi|217396372|gb|EEC36389.1| polar amino acid ABC transporter, permease protein, PAAT family
           [Burkholderia pseudomallei 576]
 gi|225931086|gb|EEH27094.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei Pakistan 9]
 gi|237506385|gb|ACQ98703.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei MSHR346]
 gi|238524886|gb|EEP88316.1| glutamate/aspartate transport system permease protein GltJ
           [Burkholderia mallei GB8 horse 4]
 gi|242139437|gb|EES25839.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1106b]
 gi|243065197|gb|EES47383.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei PRL-20]
 gi|254219938|gb|EET09322.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1710a]
          Length = 246

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFM 230

Query: 386 NRLNAK 391
             + +K
Sbjct: 231 RWVESK 236



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A ++G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLMSGFWVTVKVSLVAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  V  +LP+
Sbjct: 78  LIVQFFVWYLVVPELLPV 95


>gi|315166947|gb|EFU10964.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
          Length = 722

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 29/209 (13%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           FV + ++G++  LF      A R+    +    + +PL+ ++ F+ FGLP          
Sbjct: 536 FVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLMVLAFFIYFGLPG--------- 586

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 VLG FN        P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +L
Sbjct: 587 ------VLG-FNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+
Sbjct: 633 GLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQS 692

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +   IYL L   +      L  K+
Sbjct: 693 TMVYFVIALIYLILITSLTKLAKNLEKKV 721


>gi|17548701|ref|NP_522041.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17430949|emb|CAD17631.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 262

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 85/134 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +LGL+       V+ PQA +  +
Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL + +++LLK+SSLA A+G  +L +VG  +   T Q +  ++    IYL+L+ ++  F
Sbjct: 188 PPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247

Query: 385 MNRLNAKIALKEKK 398
            N +  ++ ++ ++
Sbjct: 248 SNAVEQRMDVEGRR 261


>gi|323527326|ref|YP_004229479.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323384328|gb|ADX56419.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 246

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L  +TAA + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FSASIICLGLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTLAYVLINLVVMQLM 230

Query: 386 NRLNAKIAL 394
             + A+  L
Sbjct: 231 RWVEARTRL 239



 Score = 43.5 bits (101), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L GF  T  ++ S  + A I+G+  G  R   NK  + I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSFFGVLRTVPNKWASGIGTVYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  +  +LP+
Sbjct: 78  LIVQFFTWYLVIPELLPV 95


>gi|167587240|ref|ZP_02379628.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 240

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 66/96 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  VP  Q +AA ALGLT  +A R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVPLAQRDAAAALGLTPLQALRYVILPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  Q +NL+KNSSLA+A+G A+L      +  +T
Sbjct: 166 PPLFGQTMNLVKNSSLAMAIGVAELSYASRQVETET 201


>gi|254253238|ref|ZP_04946556.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124895847|gb|EAY69727.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 246

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFM 230

Query: 386 NRLNAKIAL 394
             + A+  L
Sbjct: 231 RWIEARTRL 239



 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK +A I  VYV +FRN+P
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNVP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFIWYLVVPELLP 94


>gi|331266847|ref|YP_004326477.1| ABC transporter membrane-spanning permease,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
 gi|326683519|emb|CBZ01137.1| ABC transporter membrane-spanning permease,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
          Length = 225

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 115/239 (48%), Gaps = 45/239 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI+  + +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSC 275
              PLL     + +GLP                       I   T+  P + +  + +  
Sbjct: 68  ---PLLVQFVIVFYGLP----------------------LISEHTIMIPIYWTAVLCVGL 102

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+
Sbjct: 103 YHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLI 162

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           KN+S    +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 163 KNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G + G    S ++++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I +H+I++P
Sbjct: 80  ----LPLISEHTIMIP 91


>gi|167904261|ref|ZP_02491466.1| hypothetical protein BpseN_18566 [Burkholderia pseudomallei NCTC
           13177]
          Length = 246

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFM 230

Query: 386 NRLNAK 391
             + +K
Sbjct: 231 RWVESK 236



 Score = 43.5 bits (101), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLMSGFWVTVKVSLAAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  V  +LP+
Sbjct: 78  LIVQFFVWYLVVPELLPV 95


>gi|238797860|ref|ZP_04641352.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia mollaretii ATCC 43969]
 gi|238718276|gb|EEQ10100.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia mollaretii ATCC 43969]
          Length = 245

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 68/96 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ Y+ AFIAE +RSG+  V +GQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTLYSTAFIAEELRSGISGVAKGQKYAAQALGLTGWQSMRHVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ +T++G L+ A R S N+ + W    Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYSTLFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLP 157
               LP
Sbjct: 82  ASQFLP 87


>gi|306825705|ref|ZP_07459044.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432066|gb|EFM35043.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 225

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 43/238 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI+  + +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
              PLL     + +GLP +           D  ++            P + +  + +  Y
Sbjct: 68  ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+K
Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           N+S    +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALYGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G + G    S ++++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH+I++P
Sbjct: 80  ----LPLISDHTIMIP 91


>gi|291527965|emb|CBK93551.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Eubacterium rectale
           M104/1]
          Length = 504

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 121/212 (57%), Gaps = 27/212 (12%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLVLIALKY 242
           I +F+ +LGIVL  F   + R  H++ G  L +L      Y++  +I G P ++ + + Y
Sbjct: 307 ITIFAVMLGIVLG-FLIAIVRTSHDRNG-GLAILNGICKAYLT--IIRGTPVMIQLLIIY 362

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                        ++  ++V+ + +   IA    +AA++AEIVRSG+++V  GQ EA  +
Sbjct: 363 -------------YVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIGQFEAGRS 409

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL +R+  +LV++PQA+++I+P L +++++LLK +S++  +G  DL   G  I + T +
Sbjct: 410 LGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYE 469

Query: 363 A----IEIILIWMFIYLSLSIMIALFMNRLNA 390
           A    I + LI++ I + LS  ++    RL +
Sbjct: 470 AFIPLIAVALIYLVIVMLLSHGVSKLERRLRS 501


>gi|254509082|ref|ZP_05121185.1| ABC-type glutamine transport system, permease component [Vibrio
           parahaemolyticus 16]
 gi|219548015|gb|EED25037.1| ABC-type glutamine transport system, permease component [Vibrio
           parahaemolyticus 16]
          Length = 246

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 99/178 (55%), Gaps = 23/178 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++P+L +  ++ +G+PTL+ ++L +                       F +  IAL+  
Sbjct: 89  RSIPVLVLLLWVYYGMPTLLDVSLDH-----------------------FWAGVIALTVA 125

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF+AE+ R G+ A+ RGQ EAA +LGL++ +  RLV+LPQA R I+PPL +Q++ +LK
Sbjct: 126 ESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMRLVILPQAFRQILPPLGNQFVYILK 185

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSL   +G +DL      ++      +EI    +  YL L ++++  +  L  +IA+
Sbjct: 186 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLEKRIAI 243



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 1/74 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  IG LV    LS + ++  I R+YVE+ R+IP LV++ ++
Sbjct: 41  LIAGFNDTIQVSLLSMLFAMTIGLLVALPALSNSPILKGINRLYVEIIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPIP-DH 161
           Y  + ++L +  DH
Sbjct: 101 YYGMPTLLDVSLDH 114


>gi|295394800|ref|ZP_06805015.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972396|gb|EFG48256.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 276

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 21/205 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + +LG+V +L   RLS     K   ++P   +  F   GLP L+LI   Y L      
Sbjct: 81  VLALILGVVFALL--RLS----SKKWISVPATLVLEFF-RGLPVLLLIFATYLLF----- 128

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                   G T+   F  + I L+ Y    IAE+VR+G++AVPRGQ EAA ++GL+  + 
Sbjct: 129 --------GKTIG-SFWPVVIGLTLYNGMVIAEVVRAGILAVPRGQREAAQSIGLSDSQT 179

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
             LVL+PQA R+++P L +Q + LLK+S+L   V + DL+     I  Q G  +   ++ 
Sbjct: 180 MSLVLMPQAFRAMMPTLIAQIVVLLKDSALGYMVTYQDLLHQVNIIGRQYGNLLPTFIVG 239

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
             IY+++++++A     L +++  K
Sbjct: 240 AVIYIAINLIVAGIARWLESRMQRK 264


>gi|167738656|ref|ZP_02411430.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 14]
          Length = 158

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 24  EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 83

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 84  PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 119


>gi|329116355|ref|ZP_08245072.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326906760|gb|EGE53674.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 229

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 118/214 (55%), Gaps = 22/214 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFD 247
           F  +LGI+++            K    LPL ++++F ++   G P +V I + +  +HF+
Sbjct: 30  FGTILGIIITFL----------KRSSILPLKWLASFYVWIFRGTPMVVQIMIAFAWMHFN 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                Q   I    ++ +F  L    I +S  + A+I+EIVR+G+ AVP GQ+EAA +LG
Sbjct: 80  -----QMPIIDFGVLNLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPAGQLEAAYSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +  + A R V+LPQA ++I+P L ++++ ++K+S+L   +G  +L +   +++  T Q I
Sbjct: 135 IRPKNAMRFVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQSVVTSTYQPI 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +L   F YL ++ +++  ++ L  K+    K 
Sbjct: 195 TPLLFGAFYYLMVTTVMSQLLHLLEKKMGQGVKS 228


>gi|296132710|ref|YP_003639957.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola sp. JR]
 gi|296031288|gb|ADG82056.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola potens JR]
          Length = 225

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 118/219 (53%), Gaps = 20/219 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           + T  ++ V S  +G VL L  +  RLS+    K    L  +Y+  F   G P LV I +
Sbjct: 23  VKTTIQLTVISVSIGTVLGLIFSILRLSKF---KILSFLSAVYVDFFR--GTPLLVQILM 77

Query: 241 KYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               HF   P +G+F         P  +S  +ALS  + A+IAEI R+G+ ++ RGQMEA
Sbjct: 78  ---FHFAIMPAIGRF---------PSIVSGLVALSLNSGAYIAEIFRAGIQSIDRGQMEA 125

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LG+T+ +A R +++PQA + ++P L ++++ +LK+SSL   +   +L   G  I  +
Sbjct: 126 ARSLGMTYGQAMRYIIVPQAFKRVLPALGNEFIAMLKDSSLVSVIAVQELAMTGSLISGR 185

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T +  E  +    +YL L+++++ F+  L  +    + +
Sbjct: 186 TARPFEAWIPVAILYLILTMVLSRFVAYLERRFGKSDTR 224


>gi|291524539|emb|CBK90126.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Eubacterium rectale DSM
           17629]
          Length = 504

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 119/211 (56%), Gaps = 25/211 (11%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243
           I +F+ +LGIVL  F   + R  H++ G       +   Y++  +I G P ++ + + Y 
Sbjct: 307 ITIFAVMLGIVLG-FLIAIVRTSHDRNGGLAILNGICKAYLT--IIRGTPVMIQLLIIY- 362

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       ++  ++V+ + +   IA    +AA++AEIVRSG+++V  GQ EA  +L
Sbjct: 363 ------------YVVLASVTNKILVAVIAFGLNSAAYVAEIVRSGIMSVDIGQFEAGRSL 410

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +R+  +LV++PQA+++I+P L +++++LLK +S++  +G  DL   G  I + T +A
Sbjct: 411 GLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGYIGMMDLTKGGDIIRSNTYEA 470

Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRLNA 390
               I + LI++ I + LS  ++    RL +
Sbjct: 471 FIPLIAVALIYLVIVMLLSHGVSKLERRLRS 501


>gi|237739680|ref|ZP_04570161.1| amino acid transport system permease [Fusobacterium sp. 2_1_31]
 gi|262066638|ref|ZP_06026250.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium periodonticum ATCC 33693]
 gi|294783187|ref|ZP_06748511.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium sp. 1_1_41FAA]
 gi|229423288|gb|EEO38335.1| amino acid transport system permease [Fusobacterium sp. 2_1_31]
 gi|291379661|gb|EFE87179.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium periodonticum ATCC 33693]
 gi|294480065|gb|EFG27842.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium sp. 1_1_41FAA]
          Length = 236

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 89/147 (60%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQMEA  ALGL++ +
Sbjct: 90  ILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA+++I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 150 TMRKIIVPQAIKNILPALVSEFITLLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
             FIYL L+ +  +FM ++   + + +
Sbjct: 210 VGFIYLILTSIFTVFMRKVERGLKVSD 236


>gi|24112047|ref|NP_706557.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 301]
 gi|30062158|ref|NP_836329.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 2457T]
 gi|110804697|ref|YP_688217.1| glutamate/aspartate transport system permease [Shigella flexneri 5
           str. 8401]
 gi|24050871|gb|AAN42264.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 301]
 gi|30040403|gb|AAP16135.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 2457T]
 gi|110614245|gb|ABF02912.1| glutamate/aspartate transport system permease [Shigella flexneri 5
           str. 8401]
 gi|281600011|gb|ADA72995.1| Glutamate/aspartate transport system permease [Shigella flexneri
           2002017]
 gi|313649700|gb|EFS14124.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           flexneri 2a str. 2457T]
          Length = 246

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWVWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|116628198|ref|YP_820817.1| ABC-type amino acid transport system, periplasmic and permease
           components [Streptococcus thermophilus LMD-9]
 gi|116101475|gb|ABJ66621.1| ABC-type amino acid transport system, periplasmic and permease
           components [Streptococcus thermophilus LMD-9]
          Length = 736

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+  + A       R+         + +PL+ ++ F+ +G+P L+       
Sbjct: 544 FAIAMIIGIIFGMMAVAPNKTLRVISQIFVDVVRGIPLMIVAAFIYWGIPNLIE------ 597

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                      N  G  +   +F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 598 -----------NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSL 646

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ +    R ++LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 647 GVPYNTTMRKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 706

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   IYL +   +     RL  ++
Sbjct: 707 FRMYAILAIIYLVIITCLTKLAKRLEKRL 735


>gi|326692921|ref|ZP_08229926.1| ABC-type amino acid transport system, permease component
           [Leuconostoc argentinum KCTC 3773]
          Length = 214

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 80/127 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +AL  YT+AFIAE VR+G++AV  GQME A A GL+  +A R ++LPQA R  +P
Sbjct: 84  FVSGTVALMLYTSAFIAETVRAGILAVNGGQMEGARANGLSFAQAMRHIVLPQAFRVALP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q++NL+KNSS+   VG  DL+  G  I   T +     +I   +YL +++ ++ +M
Sbjct: 144 SLGNQFINLVKNSSILAFVGGLDLMYQGNMIAANTFETFGTYIIVGILYLIITLPLSYYM 203

Query: 386 NRLNAKI 392
             L  K+
Sbjct: 204 QHLERKL 210



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF  T   +   ++ + I+GT+    ++     V  I  +YV+VFRNIP LV+ FF 
Sbjct: 12  LMQGFGYTLLSSVIALVGSLILGTVFAVMQVMPQAWVRRIGNIYVQVFRNIPLLVITFFF 71

Query: 149 Y 149
           +
Sbjct: 72  F 72


>gi|295675493|ref|YP_003604017.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295435336|gb|ADG14506.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 214

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 79/126 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I LS Y  A+IAEI RSG+ AVP+GQ E +  LGLT  +A   V+LPQ  + ++P
Sbjct: 86  FAAGVIGLSVYQGAYIAEIFRSGIEAVPKGQWEVSQILGLTRAQAFSFVVLPQTGKIVLP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  QYL+L+K++S+   +G ++L+  G  I+++ G+ +EI  +   IY ++   ++ ++
Sbjct: 146 PLVGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRIGKPVEIYGLVALIYFAVCFPLSQWV 205

Query: 386 NRLNAK 391
              + +
Sbjct: 206 RHHDRR 211


>gi|121592679|ref|YP_984575.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|222109459|ref|YP_002551723.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           ebreus TPSY]
 gi|120604759|gb|ABM40499.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax sp. JS42]
 gi|221728903|gb|ACM31723.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax ebreus TPSY]
          Length = 260

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 12/171 (7%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +T +   L ++++F I+   G P LV I   Y   F  PVL     + G  + P+F +  
Sbjct: 81  RTSRLAWLRWVASFYIWAIRGTPLLVQILFVY---FALPVL-----VPGLNL-PDFAAAV 131

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AE +R+GL+AVPRGQ EAA ALGL+       V+ PQA +  +PPL S 
Sbjct: 132 VALGLNVGAYNAEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVFPQAFKIALPPLVSN 191

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++ LLK+SSLA A+G  +L +VG  I + T Q +  +      YL L+ ++
Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGNRIQSATFQPVATLTTVAITYLILTTLV 242


>gi|149190471|ref|ZP_01868742.1| putative amino acid ABC transporter, permease protein [Vibrio
           shilonii AK1]
 gi|148835725|gb|EDL52691.1| putative amino acid ABC transporter, permease protein [Vibrio
           shilonii AK1]
          Length = 247

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 98/178 (55%), Gaps = 23/178 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++P+L +  ++ +G+PTL+ I+L    HF   V                    IAL+  
Sbjct: 90  RSIPVLVLLLWVYYGMPTLLDISLN---HFWAGV--------------------IALTIA 126

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF+AE+ R G+ AV RGQ EAA +LGL + +  RLV+LPQA R I+PPL +Q++ +LK
Sbjct: 127 ESAFMAEVFRGGIQAVTRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILK 186

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSL   +G +DL      ++      +EI    +  YL L ++++  +  L  +IA+
Sbjct: 187 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLEKRIAI 244



 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 43/70 (61%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF +T +++   M+ A +IG LV    LS    +  I RVYVEV R+IP LV++ ++
Sbjct: 42  LLAGFKDTIYVSLLSMMFAMLIGLLVAFPALSDKPWLRAINRVYVEVIRSIPVLVLLLWV 101

Query: 149 YKSVLSVLPI 158
           Y  + ++L I
Sbjct: 102 YYGMPTLLDI 111


>gi|194434439|ref|ZP_03066700.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Shigella dysenteriae 1012]
 gi|194417290|gb|EDX33398.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Shigella dysenteriae 1012]
 gi|332096803|gb|EGJ01793.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           dysenteriae 155-74]
          Length = 224

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIKSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIDERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|257869222|ref|ZP_05648875.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257803386|gb|EEV32208.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 718

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 29/192 (15%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+L LF+    R      G      + +P++ ++ F+ FGL   + I +   
Sbjct: 532 FALALIIGIILGLFSVSPIRALRIFAGIYVDIIRGIPMMVLAFFIFFGLSDAIGITI--- 588

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                               P+F +  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 589 --------------------PDFAAGVITLTLNASAYIAEIVRGGIKAVPVGQMEASRSL 628

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+  G  I+ +T Q+
Sbjct: 629 GLTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVARTTQS 688

Query: 364 IEIILIWMFIYL 375
             + LI   +YL
Sbjct: 689 TYVYLIVAVMYL 700


>gi|83720841|ref|YP_441773.1| hypothetical protein BTH_I1226 [Burkholderia thailandensis E264]
 gi|167580591|ref|ZP_02373465.1| hypothetical protein BthaT_20718 [Burkholderia thailandensis TXDOH]
 gi|167618698|ref|ZP_02387329.1| hypothetical protein BthaB_20482 [Burkholderia thailandensis Bt4]
 gi|257137941|ref|ZP_05586203.1| hypothetical protein BthaA_01784 [Burkholderia thailandensis E264]
 gi|83654666|gb|ABC38729.1| hypothetical protein BTH_I1226 [Burkholderia thailandensis E264]
          Length = 246

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMAFM 230

Query: 386 NRLNAK 391
             + +K
Sbjct: 231 RWVESK 236



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLMSGFWVTVKVSLAAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  V  +LP+
Sbjct: 78  LIVQFFVWYLVVPELLPV 95


>gi|26991699|ref|NP_747124.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24986800|gb|AAN70588.1|AE016701_8 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 320

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 15/208 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I + Y   F  
Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            VL          +S EF  +  AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL   
Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI  
Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +YL +++ ++   +RL  ++A  +
Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320


>gi|313500999|gb|ADR62365.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 320

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 15/208 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I + Y   F  
Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            VL          +S EF  +  AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL   
Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI  
Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +YL +++ ++   +RL  ++A  +
Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320


>gi|108803349|ref|YP_643286.1| amino acid ABC transporter permease [Rubrobacter xylanophilus DSM
           9941]
 gi|108764592|gb|ABG03474.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rubrobacter xylanophilus DSM
           9941]
          Length = 242

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 126/243 (51%), Gaps = 40/243 (16%)

Query: 165 LPFGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           L FG+ L N     +GL+  TL++   A+      V+GIVL LF               L
Sbjct: 25  LDFGVVLENPAPLLKGLAV-TLSLAALAE------VVGIVLGLF---------------L 62

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLY----IAL 273
            LL IS   +  LP  V I     +    P+L Q   I  +T  V   F SL+     AL
Sbjct: 63  ALLKISRSRLLSLPAQVYI----DVFRGTPLLVQITIIYFTTAAVGIRFTSLFFAGLTAL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  +AA++AEI R+G+ ++ +GQMEA  A GL++ +  R +++PQA R +IPPLT++++ 
Sbjct: 119 SLNSAAYVAEIFRAGIQSIDKGQMEAGRASGLSYAQTMRYIIVPQAFRRVIPPLTNEFVT 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIALFMNRLNA 390
           L+K++SL   +G A+L+     + + T     +I   LI++ + L L  +  +   RLN 
Sbjct: 179 LIKDTSLVSVIGLAELLRAARVLQSATFNGTPLIAAALIYLAVCLPLIYLTNILERRLNR 238

Query: 391 KIA 393
           + A
Sbjct: 239 RTA 241


>gi|307730961|ref|YP_003908185.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307585496|gb|ADN58894.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 246

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L  +T A + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FSASIICLGLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTLAYVLINLVVMQLM 230

Query: 386 NRLNAKIAL 394
             + AK  L
Sbjct: 231 RWVEAKTRL 239



 Score = 43.1 bits (100), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L GF  T  ++ S  + A I+G+  G  R   NK  + +  VYV +FRNIP
Sbjct: 18  EPTTYLGWLLSGFWVTITVSLSAWVIALIVGSFFGVLRTVPNKWASGVGTVYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  +  +LP+
Sbjct: 78  LIVQFFTWYLVIPELLPV 95


>gi|315924300|ref|ZP_07920523.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622371|gb|EFV02329.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 215

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 116/224 (51%), Gaps = 24/224 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++      VF  +LGIV++L      R  H K   A+   Y+  F   G P L+ + +
Sbjct: 10  LTIEVAIVAVVFGAILGIVVAL-----GRISHNKVANAVTWFYVWFFR--GTPLLLQLFI 62

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F  P++   N  G + V       ++  S  + A++AEI+R+ + ++P GQMEAA
Sbjct: 63  VY---FAVPII-YLNATGSTFVIDPMFCAFVTFSLNSTAYMAEIIRAAIESIPEGQMEAA 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+++ +A R +++PQ  + ++ PL ++ + LLK++SL   +   D++    T+ + T
Sbjct: 119 KALGMSYHQAMRKIIIPQTFKRLVAPLGNELIMLLKDTSLVSTIALFDVLRTVKTMASST 178

Query: 361 GQAIEIILIWMF------IYLSLSIMIALFMNRLNAKIALKEKK 398
           G        W++      IYL L+ ++ +  ++L  +    E++
Sbjct: 179 GN-------WIYYLYAAAIYLFLTTILQVIFDKLETRFGAYERR 215



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           AI  G V T  +A   ++   I+G +V  GR+S NK+   +   YV  FR  P L+ +F 
Sbjct: 3   AIFSGTVLTIEVAIVAVVFGAILGIVVALGRISHNKVANAVTWFYVWFFRGTPLLLQLFI 62

Query: 148 LYKSV 152
           +Y +V
Sbjct: 63  VYFAV 67


>gi|300692511|ref|YP_003753506.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
 gi|299079571|emb|CBJ52249.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
          Length = 242

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP A R I+P
Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M
Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMTIM 226

Query: 386 NRLNAKIAL 394
             + A+  L
Sbjct: 227 RWVEARTRL 235



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A I+G+++G  R   NKL++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKTTIALGLSSWIIALILGSVLGVLRTVPNKLLSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDH 161
            +V +F  Y  +  ++P  D+
Sbjct: 76  LIVQLFIWYFVMPELVPGGDY 96


>gi|167036062|ref|YP_001671293.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862550|gb|ABZ00958.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 320

 Score = 92.8 bits (229), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 17/209 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I + Y      
Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY------ 178

Query: 249 PVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                  FIG    +S EF  +  AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL  
Sbjct: 179 ------FFIGTVLNLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNA 231

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI 
Sbjct: 232 GQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIW 291

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +YL +++ ++   +RL  ++A  +
Sbjct: 292 FCVAGLYLLINLPLSHIASRLERRLAQSD 320


>gi|209517529|ref|ZP_03266369.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502062|gb|EEA02078.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 246

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +TAA + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FSASIVCLGLFTAARVCEQVRSGINALPRGQRAAGLAVGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTVAYMLINVIVMFLM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 RWVEVKTRL 239



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L G   T  ++ S  + A I+G+L G  R   NK  + +  VYV +FRNIP
Sbjct: 18  EPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKWASGVGTVYVAIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  +  +LP+
Sbjct: 78  LIVQFFIWYLVIPELLPV 95


>gi|224418024|ref|ZP_03656030.1| amino acid ABC transporter permease [Helicobacter canadensis MIT
           98-5491]
 gi|253827356|ref|ZP_04870241.1| ABC-type transport system, permease component [Helicobacter
           canadensis MIT 98-5491]
 gi|313141563|ref|ZP_07803756.1| amino acid transport system permease protein [Helicobacter
           canadensis MIT 98-5491]
 gi|253510762|gb|EES89421.1| ABC-type transport system, permease component [Helicobacter
           canadensis MIT 98-5491]
 gi|313130594|gb|EFR48211.1| amino acid transport system permease protein [Helicobacter
           canadensis MIT 98-5491]
          Length = 225

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 87/141 (61%), Gaps = 2/141 (1%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+G     P  +   IA    + A++AEI+R+G+  + +GQMEAA ALG+ +  + + ++
Sbjct: 85  FVGALRDMPILLIAAIAFGINSGAYVAEIIRAGIAGLDKGQMEAARALGMGYALSMKEII 144

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQA++ I+PPL S+++ LLK +S+   +G  DL+     I +QT +AIE +L    IYL
Sbjct: 145 IPQAIKRILPPLVSEFIALLKETSIVGFIGGVDLLRAANIITSQTYRAIEPLLAVGIIYL 204

Query: 376 SLSIMIALFMNRLNAKIALKE 396
            L+ + A+ M ++  +  LKE
Sbjct: 205 ILTSIFAMLMRKVEKR--LKE 223


>gi|28900676|ref|NP_800331.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365550|ref|ZP_05778087.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260877614|ref|ZP_05889969.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260895965|ref|ZP_05904461.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260901646|ref|ZP_05910041.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28809056|dbj|BAC62164.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308085227|gb|EFO34922.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090547|gb|EFO40242.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308108934|gb|EFO46474.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308114332|gb|EFO51872.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
          Length = 265

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 19/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     +    +T++ +A    F+ VLG+V +L   RLS     K G 
Sbjct: 43  VPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL--RLS---DSKVGN 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +   Y+   +I   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 98  VIGTTYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SS+   +   DL +    I+++T    EI      IYL+L++ ++     L  K+    +
Sbjct: 204 SSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263

Query: 398 K 398
           K
Sbjct: 264 K 264


>gi|15807268|ref|NP_295998.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6460085|gb|AAF11824.1|AE002060_3 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 239

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 15/183 (8%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P+  I   ++ G+P +VL+++ Y   F  P LG     G       F +  +AL  Y+AA
Sbjct: 66  PIGNIYVEVVRGIPLIVLLSVIY---FGLPTLG-LTLAG-------FPAAVLALGLYSAA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + +EIVR GL +VP GQ+EAA +LGL+  +A R V+LPQA R  +P L +++++L+  SS
Sbjct: 115 YTSEIVRGGLGSVPAGQIEAARSLGLSRGQALRFVVLPQAWRVALPALGNEFVSLILGSS 174

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIMIALFMNRLNAKIALK 395
           LA AV   +L S G  I N T +  E+  +   IY     +L+  +    +RL+   +L 
Sbjct: 175 LASAVTLQELFSQGRYITNATYRQFEVYAVLAVIYFVLTFTLTRAVRALEHRLSRGQSLP 234

Query: 396 EKK 398
           E++
Sbjct: 235 ERR 237


>gi|254229165|ref|ZP_04922584.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262395515|ref|YP_003287368.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
 gi|151938250|gb|EDN57089.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262339109|gb|ACY52903.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 265

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 19/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     +    +T++ +A    F+ VLG+V +L   RLS     K G 
Sbjct: 43  VPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL--RLS---DSKVGN 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +   Y+   +I   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 98  VIGATYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI+R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEILRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SS+   +   DL +    I+++T    EI      IYL+L++ ++     L  K+    +
Sbjct: 204 SSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263

Query: 398 K 398
           K
Sbjct: 264 K 264


>gi|148550099|ref|YP_001270201.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148514157|gb|ABQ81017.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 320

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 15/208 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I + Y   F  
Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            VL          +S EF  +  AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL   
Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI  
Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +YL +++ ++   +RL  ++A  +
Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320


>gi|293408779|ref|ZP_06652618.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli B354]
 gi|291471957|gb|EFF14440.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli B354]
          Length = 224

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   FIY  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFIYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|167837859|ref|ZP_02464742.1| hypothetical protein Bpse38_15327 [Burkholderia thailandensis
           MSMB43]
          Length = 246

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMAFM 230

Query: 386 NRLNAK 391
             + +K
Sbjct: 231 RWVESK 236



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++ +  + A ++G+L G  R   +K ++ I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLMSGFWVTIKVSLAAWVIALVVGSLFGVLRTMPSKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLPI 158
            +V  F  Y  V  +LP+
Sbjct: 78  LIVQFFIWYLVVPELLPV 95


>gi|167586130|ref|ZP_02378518.1| hypothetical protein BuboB_12374 [Burkholderia ubonensis Bu]
          Length = 246

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 75/126 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMAFM 230

Query: 386 NRLNAK 391
             +  K
Sbjct: 231 RWVEGK 236



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFGVTIKVSLTAWVIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFIWYLVVPELLP 94


>gi|251781980|ref|YP_002996282.1| hypothetical protein SDEG_0566 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390609|dbj|BAH81068.1| hypothetical protein SDEG_0566 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 233

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 90/157 (57%), Gaps = 8/157 (5%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPEFM--SLYIALSC----YTAAFIAEIVRSGLIAVPR 294
           + + + P+L Q  F + G + +S  F+  S ++   C    Y AA+IAE++RSG+ AVP+
Sbjct: 70  EFYQNTPLLVQVVFMYYGLAIISKGFIMPSAFLTTVCCVGLYHAAYIAEVIRSGIEAVPK 129

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++ G T  +   L+++PQA+R+I+PPLT+Q +NL+KN+S+   +  ADL+    
Sbjct: 130 GQTEAALSQGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTAK 189

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                T   +       F+Y  L   IA+F  R   +
Sbjct: 190 VWAYDTTYYVPAFAGAAFLYFILCFPIAIFGRRQEER 226


>gi|160896812|ref|YP_001562394.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160362396|gb|ABX34009.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 250

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/134 (42%), Positives = 80/134 (59%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ + +AL  +T+A IAE VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I
Sbjct: 109 PGFVLVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTFQYYRYVLLPMAFRII 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV  A+L         +T + IEI L        L ++ A 
Sbjct: 169 IPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEIYL----AVTGLYVVSAF 224

Query: 384 FMNRLNAKIALKEK 397
            +NR+ A I  + +
Sbjct: 225 AINRIMAFIEKRSR 238



 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 10/112 (8%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+ Q       D +Y   +L  +  T  ++   ++ A ++G+L+G  R    +   WI R
Sbjct: 16  EVGQSCFGKNGDITYLDWMLSAWGWTISVSLLSLVIALVVGSLIGTLRTLEGR--PWIVR 73

Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP----IPDHS-IVLPFGMFLNNR 174
           +   +VE+FRNIP LV IF  Y  V S +P    +P    +VL  G F + R
Sbjct: 74  LGNAWVELFRNIPLLVHIFMWYHVVPSFVPALKSLPGFVLVVLALGFFTSAR 125


>gi|187927461|ref|YP_001897948.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|309779837|ref|ZP_07674592.1| glutamate/aspartate transport system permease protein GltJ
           [Ralstonia sp. 5_7_47FAA]
 gi|187724351|gb|ACD25516.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|308921414|gb|EFP67056.1| glutamate/aspartate transport system permease protein GltJ
           [Ralstonia sp. 5_7_47FAA]
          Length = 242

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 77/117 (65%), Gaps = 2/117 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP + R I+P
Sbjct: 107 FLSAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRYVMLPMSFRIIVP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWMFIYLSLSIM 380
           PLTS++LN+ KNS++A  +G  +L + G  +++ T Q  E  I +  M++ ++L++M
Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVM 223



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A +IG+++G  R   NK ++ +   YVEVFRNIP
Sbjct: 16  QNQTYLDWLLAGLKTTVVLGLSSWIIALVIGSVLGVLRTVPNKWLSGLAAAYVEVFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDH 161
            +V +F  Y  +  ++P  D+
Sbjct: 76  LIVQLFIWYFVMPELVPGGDY 96


>gi|225868950|ref|YP_002744898.1| amino acid ABC transporter permease protein [Streptococcus equi
           subsp. zooepidemicus]
 gi|225702226|emb|CAW99967.1| putative amino acid ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 227

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 123/222 (55%), Gaps = 18/222 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +TM  +A +  F  ++G++++L      +  H K    L  LY+  F   G P +V I +
Sbjct: 19  VTMMISACVVFFGTIIGLLVTLI-----KRSHIKPLSWLVSLYVWIFR--GTPMVVQIMI 71

Query: 241 KYQ-LHF-DKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRG 295
            +  LHF D P+      +G   +  +F  L    I +S  + A+I+EIVR+G+ AVP+G
Sbjct: 72  AFAWLHFNDLPI------VGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA +LG+  + A R V+LPQA+R+I+P L ++ + ++K+S+L   +G  +L +   +
Sbjct: 126 QLEAAYSLGIRPKHAMRYVVLPQALRTILPALGNELITIIKDSALLQTIGVMELWNGAQS 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++  T   I  +L   F YL ++ +++  +  L  K+A   K
Sbjct: 186 VVAATYLPITPLLFAAFYYLMVTTLLSYLLGALERKLAQGGK 227


>gi|270263715|ref|ZP_06191984.1| transporter [Serratia odorifera 4Rx13]
 gi|270042599|gb|EFA15694.1| transporter [Serratia odorifera 4Rx13]
          Length = 224

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+I++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIISISRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +  
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLAASAL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 40/68 (58%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS  K ++W   +YV +FR++P ++V+ + 
Sbjct: 16  LLQGLVITLKITVTAIVFGILWGTILAVMRLSPIKPISWFATLYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  V S+L
Sbjct: 76  YLVVPSLL 83


>gi|297565167|ref|YP_003684139.1| polar amino acid ABC transporter inner membrane subunit
           [Meiothermus silvanus DSM 9946]
 gi|296849616|gb|ADH62631.1| polar amino acid ABC transporter, inner membrane subunit
           [Meiothermus silvanus DSM 9946]
          Length = 216

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 13/204 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I   S + G+ L      L+R    +    L L YI   L+ G P LV I L   + F 
Sbjct: 22  RITALSLIFGVFLGTLVA-LARMSPIRWLSGLTLGYIE--LLRGTPLLVQIFL---IFFG 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L Q           EF++  IA S  ++A++AEI+R+G+ ++P+GQ EAA++LG + 
Sbjct: 76  IPQLTQQQI-------NEFVAGVIAFSINSSAYVAEILRAGIQSIPKGQREAALSLGFSP 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQA   +IPPL ++ + LLKNSSL  A+   +L   G  I  +T +  E+ 
Sbjct: 129 TQTLRYIILPQAFIRVIPPLVNEGIALLKNSSLLSAIAVVELTRAGQLISARTFKPFEMY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           L    IYL ++++++    +L A+
Sbjct: 189 LAVSLIYLVMTVILSFVARQLEAR 212


>gi|317047305|ref|YP_004114953.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948922|gb|ADU68397.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 225

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+I++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIISIARGQSSAALALGMTHWQSMQLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGLVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  K
Sbjct: 216 VSYLKRK 222



 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   I GTL+   RLSA   + W  ++YV +FR++P ++V+ + 
Sbjct: 16  LLNGMVITLKITLTAVVFGIIWGTLLAVMRLSAFAPIRWFAKLYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  V S L
Sbjct: 76  YLVVPSFL 83


>gi|153834291|ref|ZP_01986958.1| ABC-type glutamine transport system, permease component [Vibrio
           harveyi HY01]
 gi|148869299|gb|EDL68313.1| ABC-type glutamine transport system, permease component [Vibrio
           harveyi HY01]
          Length = 246

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 23/178 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++P+L +  ++ +G+PTL+ ++L +                       F +  IAL+  
Sbjct: 89  RSIPVLVLLLWVYYGMPTLLDVSLNH-----------------------FWAGVIALTIA 125

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA R I+PPL +Q++ +LK
Sbjct: 126 ESAFMAEVFRGGIQAISRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILK 185

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSL   +G +DL      ++      +EI    +  YL L ++++  +  L  +IA+
Sbjct: 186 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLEKRIAI 243



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  IG +V    LS +  + WI RVYVEV R+IP LV++ ++
Sbjct: 41  LVAGFNDTIQVSLLSMLFAMTIGLIVALPALSDSPALKWINRVYVEVIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 101 YYGMPTLLDV 110


>gi|317122273|ref|YP_004102276.1| polar amino acid ABC transporter inner membrane subunit
           [Thermaerobacter marianensis DSM 12885]
 gi|315592253|gb|ADU51549.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermaerobacter marianensis DSM 12885]
          Length = 370

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 20/210 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            SF LG+ L+L      R       +AL + YI   L+ G P +V+      L F    L
Sbjct: 177 LSFPLGVALAL-----GRVSSLPVVRALSIAYIE--LVRGTPLMVV------LFFSMTAL 223

Query: 252 GQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             F       V P+ ++   A L  +TAA++AE VR GL  VPRGQ+EAA ALGLT  +A
Sbjct: 224 PLFL---PPAVRPDLVTRAAAGLVLFTAAYVAEAVRGGLQGVPRGQIEAAQALGLTGTQA 280

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367
             LV+LPQA+R++IP L  Q+++L K++SL    G  + V V  ++++     G+ +E+ 
Sbjct: 281 VFLVVLPQALRAVIPALVGQFISLFKDTSLVAVWGLLEFVGVAQSVLSNPAYLGRHVEVY 340

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +Y      ++L   RL  ++ + E+
Sbjct: 341 AFVAAVYWVFCYGMSLASRRLERRLGVGER 370


>gi|254178708|ref|ZP_04885363.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei ATCC 10399]
 gi|254358532|ref|ZP_04974805.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei 2002721280]
 gi|148027659|gb|EDK85680.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei 2002721280]
 gi|160699747|gb|EDP89717.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei ATCC 10399]
          Length = 315

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 181 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 240

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 241 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 276


>gi|262041259|ref|ZP_06014470.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259041375|gb|EEW42435.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 246

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G AD+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLADMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 YVVERKVRL 239



 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ S  I A ++G+L G  R   N+ ++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWLWGGFQITVALSISAWIIAFLVGSLFGILRTVPNRFLSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V   LP               N G+ F +  +D N + FV S    + L
Sbjct: 77  LIVQFFTWYLVVPEFLP--------------ENIGMWFKS-ELDPNIQFFVSSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|217421697|ref|ZP_03453201.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
 gi|217395439|gb|EEC35457.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
          Length = 315

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 181 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 240

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 241 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 276


>gi|152969251|ref|YP_001334360.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206577704|ref|YP_002239697.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Klebsiella pneumoniae 342]
 gi|238893715|ref|YP_002918449.1| glutamate/aspartate transport system permease [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288936539|ref|YP_003440598.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510405|ref|ZP_06549775.1| glutamate/aspartate transport system permease [Klebsiella sp.
           1_1_55]
 gi|330005984|ref|ZP_08305450.1| putative ATP synthase F0, A subunit [Klebsiella sp. MS 92-3]
 gi|150954100|gb|ABR76130.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566762|gb|ACI08538.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Klebsiella pneumoniae 342]
 gi|238546031|dbj|BAH62382.1| glutamate/aspartate transport system permease [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891248|gb|ADC59566.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777121|gb|EFD85119.1| glutamate/aspartate transport system permease [Klebsiella sp.
           1_1_55]
 gi|328536021|gb|EGF62429.1| putative ATP synthase F0, A subunit [Klebsiella sp. MS 92-3]
          Length = 246

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G AD+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLADMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLIM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 YVVERKVRL 239



 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  L+ S  I A ++G+L G  R   N+ ++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQITVALSISAWIIAFLVGSLFGILRTVPNRFLSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V   LP               N G+ F +  +D N + FV S    + L
Sbjct: 77  LIVQFFTWYLVVPEFLP--------------ENIGMWFKS-ELDPNIQFFVSSM---LCL 118

Query: 201 SLF-ATRLSRH 210
            LF A R+   
Sbjct: 119 GLFTAARVCEQ 129


>gi|312797283|ref|YP_004030205.1| glutamate/aspartate transport system permease protein gltJ
           [Burkholderia rhizoxinica HKI 454]
 gi|312169058|emb|CBW76061.1| Glutamate/aspartate transport system permease protein gltJ
           [Burkholderia rhizoxinica HKI 454]
          Length = 246

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +TAA + E VRSG+ A+PRGQ  A +ALG T  +  R V+LP A R I+P
Sbjct: 111 FSASILCLGLFTAARVCEQVRSGIHALPRGQRAAGLALGFTLPQTYRHVMLPVAFRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T QA E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQAYESFIAVTIAYVLINLVVMGFM 230

Query: 386 NRLNAKIAL 394
             +  K  L
Sbjct: 231 RWVEKKTRL 239



 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 6/94 (6%)

Query: 69  GFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G+  + GI    V     ++Y   ++ G  NT  ++    + A  +G L+G  R   NK 
Sbjct: 2   GYHWNWGIFMTPVSTGEPTTYLGWLISGLWNTVAVSLCAWVIALFVGALMGVLRTMPNKW 61

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVL-SVLP 157
           ++ I  VYV VFRNI PL+V FF++  VL  +LP
Sbjct: 62  LSGIGTVYVAVFRNI-PLIVQFFIWYFVLPEILP 94


>gi|271499710|ref|YP_003332735.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343265|gb|ACZ76030.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 224

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLVSAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALALGMTHWQSMQLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASML 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 VNYLKRR 222



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 37/61 (60%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +  + ++   + GT++   RLS  K ++W  ++YV +FR++P ++V+ + Y  V S+
Sbjct: 23  TLEITLTAVVVGIVWGTVLAVMRLSPVKPISWFAKLYVNLFRSVPLVMVLLWFYLIVPSL 82

Query: 156 L 156
           L
Sbjct: 83  L 83


>gi|251790535|ref|YP_003005256.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247539156|gb|ACT07777.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 224

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 85/138 (61%), Gaps = 1/138 (0%)

Query: 255 NFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           N +G S  S    +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L
Sbjct: 85  NVLGLSPKSDIRLVSAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALALGMTHWQSMQL 144

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA R+++P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+
Sbjct: 145 VILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFV 204

Query: 374 YLSLSIMIALFMNRLNAK 391
           Y  +S+  ++ +N L  +
Sbjct: 205 YFVISLSASMLVNYLKRR 222



 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 37/61 (60%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +  + ++   + GT++   RLS  K ++W  ++YV +FR++P ++V+ + Y  V S+
Sbjct: 23  TLEITLTAVVVGIVWGTVLAVMRLSPIKPISWFAKLYVNLFRSVPLVMVLLWFYLIVPSL 82

Query: 156 L 156
           L
Sbjct: 83  L 83


>gi|87121722|ref|ZP_01077609.1| putative amino-acid transport system permease abc transporter
           protein [Marinomonas sp. MED121]
 gi|86162973|gb|EAQ64251.1| putative amino-acid transport system permease abc transporter
           protein [Marinomonas sp. MED121]
          Length = 270

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 118/218 (54%), Gaps = 16/218 (7%)

Query: 190 FVFSFVLGIVLSLFA---TRLSRH---FHEKTGKALPLLYISTFLIF-GLPTLVLIALKY 242
           F+ + ++G++++L      RL R    F+ +  + +P+L +  ++ F G P LV     Y
Sbjct: 56  FLIACIIGLIMALAGFSRYRLIREVARFYVEVIRGVPVLVLLFYIAFVGAPELVDF---Y 112

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                KP+  Q+        + +F  ++   +AL    +AFIAE+ R+G+  V +GQ+EA
Sbjct: 113 NWLMQKPIEWQWV---DKARTRDFNMVWRAILALCISYSAFIAEVFRAGIQEVDKGQIEA 169

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGL+  +  R ++ PQA R I+PPL + ++ ++K+S+L  A+G  D+  +G    + 
Sbjct: 170 AKALGLSGWQRFRFIIFPQAFRKILPPLGNDFVAMIKDSALVSALGVQDITQLGKVYSSS 229

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + Q  E   +  F+YL L+I ++L +      +  K+K
Sbjct: 230 SFQFFETYNVVAFVYLCLTITLSLLIRGFEQYLNRKQK 267


>gi|55821477|ref|YP_139919.1| glutamine ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823406|ref|YP_141847.1| glutamine ABC transporter permease [Streptococcus thermophilus
           CNRZ1066]
 gi|55737462|gb|AAV61104.1| glutamine ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739391|gb|AAV63032.1| glutamine ABC transporter permease protein [Streptococcus
           thermophilus CNRZ1066]
 gi|312278815|gb|ADQ63472.1| Glutamine ABC transporter permease protein [Streptococcus
           thermophilus ND03]
          Length = 736

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++GI+  + A       R+         + +PL+ ++ F+ +G+P L+       
Sbjct: 544 FAIAMIIGIIFGMMAVAPNKTLRVISQIFVDVVRGIPLMIVAAFIYWGIPNLIE------ 597

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                      N  G  +    F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 598 -----------NITGHQSPINNFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSL 646

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ +    R V+LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 647 GVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 706

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   IYL +   +     RL  ++
Sbjct: 707 FRMYAILAIIYLVIITCLTKLAKRLEKRL 735


>gi|259503172|ref|ZP_05746074.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259168829|gb|EEW53324.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 502

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 22/204 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG + +L     S+  H      + + YI    I G P LV I   Y        
Sbjct: 315 IFGFLLGTIFALMRLSQSKFLH-----GIAICYIE--FIRGTPMLVQIMFVY-------- 359

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G+ +   P  ++  IA+S  + A++AE++RSG+ ++P GQ EAA +LG+T +
Sbjct: 360 -----FGIGAIIQSMPALVAGIIAVSVNSGAYVAEVIRSGIQSLPVGQTEAARSLGMTKK 414

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQA+R+I P L ++++ LLK+SSL   +G  +L+     +   T + +  + 
Sbjct: 415 QTFRFIVLPQALRNIWPALGNEFITLLKDSSLVSTIGVGELMYQTQLVQADTYKGVLPLF 474

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
           I M IY  L+  +   +N    ++
Sbjct: 475 ITMMIYFILTFTLTRILNYFEGRM 498


>gi|6706991|gb|AAF25532.1|AF104994_2 permease [Streptomyces coelicolor A3(2)]
          Length = 313

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 114/223 (51%), Gaps = 20/223 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215
           IPD+        F ++R L+     M     I V + ++G+V  + L   RLS++     
Sbjct: 61  IPDY--------FFDDRVLT----GMGKTLLITVLAMLIGVVGGILLAVMRLSKN---PV 105

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
             ++   YI  F   G P LV +     L F+   LG F     S     F++  + L  
Sbjct: 106 TSSIAWFYIWFFR--GTPQLV-VWFNLGLVFEYINLGPFYRDEWSDFMTPFLTALLGLGL 162

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA++AEI R+GL+AV  GQ EAA ALG++H K  R +++PQAMR I+PP  ++ +N+L
Sbjct: 163 NEAAYMAEICRAGLLAVDEGQTEAAHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINML 222

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           K +SL   V +A+L  V   I   +G   E++ +    YL L+
Sbjct: 223 KTTSLVSVVQYAELFRVAQDIGQTSGAPAEMLFLAAAWYLLLT 265


>gi|297157335|gb|ADI07047.1| permease [Streptomyces bingchenggensis BCW-1]
          Length = 314

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 20/239 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           IPD+        F ++R L    +T+       V   VLGI+L++   RLS++       
Sbjct: 59  IPDY--------FFDDRILKGAGMTVWITIASMVLGVVLGILLAVM--RLSKN---PVSA 105

Query: 218 ALPLLYISTFLIFGLPTLV--LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           A+   YI  F   G P  V  L+     L F    LG       S     F++  + L  
Sbjct: 106 AIAWGYIWFFR--GTPVYVQLLVWFNLGLIFHYINLGPIYQDEWSDFMTPFLAALLGLGL 163

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA++AEI R+GL+AV  GQ EAA ALG++H K  R ++LPQAMR I+PP  ++++N+L
Sbjct: 164 NEAAYMAEICRAGLLAVDEGQTEAAHALGMSHAKTLRRIVLPQAMRVIVPPTGNEFINML 223

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK 391
           K +SL   V + +L+     I   +G   E++ +    YL L+ ++++   ++ R  A+
Sbjct: 224 KTTSLLAVVQYGELLRGAQDIAQDSGSTTEMLFLAALWYLILTSVLSVGQYYLERYYAR 282


>gi|304317591|ref|YP_003852736.1| polar amino acid ABC transporter inner membrane protein
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302779093|gb|ADL69652.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 220

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 85/129 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   IALS  +A ++AEI+RSG+ AV  GQMEA+ +LG++H  A R V++PQA+++I
Sbjct: 86  PGFVVGIIALSMNSAGYVAEIIRSGIQAVDPGQMEASRSLGMSHSMAMRYVIIPQAIKNI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++++ +LK SS+   +GFADL      + + T +A E ++I   IY  ++++ + 
Sbjct: 146 LPALGNEFVVMLKESSIVSVIGFADLTRQAEIVSSVTYRAFEPLIIIAAIYFIMTLVFSR 205

Query: 384 FMNRLNAKI 392
            +++   ++
Sbjct: 206 LLSKFERRL 214


>gi|224372630|ref|YP_002607002.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nautilia profundicola AmH]
 gi|223589466|gb|ACM93202.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nautilia profundicola AmH]
          Length = 272

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 11/201 (5%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FSF++G   S+F   ++R    K  K   +LYI   L+   P L++I   + + F  PV 
Sbjct: 77  FSFIIG---SIFG--IARWSSIKIIKIPAILYIE--LLRATPLLMVI---FWVFFAIPVF 126

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F   + VSP   ++ IA + +T+A++AEIVR+G+ ++P+GQ EAA +LG    +  
Sbjct: 127 SMAFFHTQAHVSPTVAAI-IAFTLFTSAYVAEIVRAGINSIPKGQFEAAKSLGFNSTQTF 185

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQA R +IP   SQ++ L K++SLA  +G  +       I N+   + EI     
Sbjct: 186 IYIILPQAYRKMIPAFVSQFVALFKDTSLAYTIGVIEFFRAATIINNRLYLSFEIFSFVA 245

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            +Y S++  ++ F + L  K+
Sbjct: 246 LVYFSIAFSMSKFSHMLEKKV 266


>gi|121600257|ref|YP_992993.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei SAVP1]
 gi|121229067|gb|ABM51585.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei SAVP1]
          Length = 320

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 186 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 245

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 246 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 281


>gi|167564083|ref|ZP_02356999.1| hypothetical protein BoklE_16117 [Burkholderia oklahomensis EO147]
          Length = 246

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 78/128 (60%), Gaps = 1/128 (0%)

Query: 265 EFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           +F +  IA L  +T A + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I
Sbjct: 109 QFFTASIACLGLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRII 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  
Sbjct: 169 VPPLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMS 228

Query: 384 FMNRLNAK 391
           FM  + +K
Sbjct: 229 FMRWVESK 236



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYLGWLMSGFWVTVKVSLAAWLIALVVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFVWYLVVPELLP 94


>gi|227512776|ref|ZP_03942825.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus buchneri ATCC 11577]
 gi|227522900|ref|ZP_03952949.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
 gi|227083976|gb|EEI19288.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus buchneri ATCC 11577]
 gi|227089929|gb|EEI25241.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
          Length = 235

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 31/215 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           V S++ G++L +      ++     G      + LPL+ I  F  FGLP L         
Sbjct: 32  VLSYIFGVILGVTRYVQIKYLSAIVGFVIDIIRNLPLILIIFFTYFGLPHL--------- 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G    P + S+ IA++ + AA +AEIVR+G++++P GQME A A G
Sbjct: 83  --------------GFKPDPIWASV-IAMAVFEAAMVAEIVRAGIVSIPTGQMEGARANG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363
           L++ +A   ++LPQA+R++IP + SQ+++L+K++SLA  +   DL++    I  Q T   
Sbjct: 128 LSYWQALWYIVLPQAIRNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIYGQNTNYT 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I + L    +Y  +   ++LF   L  +I    KK
Sbjct: 188 IPMFLALAVMYFIVCYSLSLFSKYLEKRIGGGNKK 222


>gi|254197953|ref|ZP_04904375.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|169654694|gb|EDS87387.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
          Length = 315

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 181 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 240

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 241 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 276


>gi|325964013|ref|YP_004241919.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470100|gb|ADX73785.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 216

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS YTAAFIAE VRSG+ +VP GQ EAA ++G+   +   L++LPQA+R+++PPL + 
Sbjct: 90  IALSTYTAAFIAEAVRSGVNSVPVGQAEAARSIGMNFGQVLNLIILPQALRTVVPPLINI 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
            + L+KNSS+A A    +L   G  + N  G A I ++L   F YL L++ + +  + + 
Sbjct: 150 LIALVKNSSVAGAFFVLELFGYGRQLANANGDAVIAVLLGTAFFYLLLTVPLGILASTVE 209

Query: 390 AKIALKE 396
            K+A+  
Sbjct: 210 RKVAIAR 216



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 92  GFVNTFWL-AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           GF+ T +L A SG+I A ++GTL+ A R+S    +     VYVEV RN P  +  FF
Sbjct: 14  GFLRTLFLSAVSGVI-ALVLGTLLAAARVSPVAALRGFSMVYVEVLRNTPLTIAFFF 69


>gi|296134852|ref|YP_003642094.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
 gi|295794974|gb|ADG29764.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
          Length = 228

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 131/234 (55%), Gaps = 22/234 (9%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           VLPF +    +GL++ T+ +   A I     +LGI+L+L   RLS   H K    L   Y
Sbjct: 12  VLPFLL----KGLTY-TIQLTVVAAIG--GTLLGILLAL--ARLS---HLKWLSLLAAGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAF 280
           I+  L+  +P L++I   +  +F  PV+ Q   I GS   P+     S Y     + AA+
Sbjct: 60  IN--LMRSIPLLLVI---FWFYFLVPVMLQS--ITGSDYPPKIGAERSAYFTFILFEAAY 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEIVR+G+ ++P+GQ+ AA ALGLT+ ++ RL++LPQA+R+++P L +Q + L ++ SL
Sbjct: 113 FAEIVRAGIQSIPKGQLGAAYALGLTYAQSMRLIILPQALRNMLPVLLTQTIVLFQDVSL 172

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +   D V     I  +  + +E+  +   +Y  LS +++  + RL+ +IA+
Sbjct: 173 VALLNVTDFVGAAMKIAQRDSRVVEMYTLVAVVYFVLSFLLSQGVKRLHQRIAI 226



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L     I  T++G L+   RLS  K ++ +   Y+ + R+IP L+VIF+ 
Sbjct: 16  LLKGLTYTIQLTVVAAIGGTLLGILLALARLSHLKWLSLLAAGYINLMRSIPLLLVIFWF 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|156972753|ref|YP_001443660.1| ABC-type amino acid transport system permease component [Vibrio
           harveyi ATCC BAA-1116]
 gi|156524347|gb|ABU69433.1| hypothetical protein VIBHAR_00418 [Vibrio harveyi ATCC BAA-1116]
          Length = 246

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 112/210 (53%), Gaps = 29/210 (13%)

Query: 191 VFSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F+  +G++++L A   S         + +  +++P+L +  ++ +G+PTL+ ++L +  
Sbjct: 57  LFAMTIGLIVALPALSDSPALKWINRVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LG
Sbjct: 115 ---------------------FWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLG 153

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      +
Sbjct: 154 LNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           EI    +  YL L ++++  +  L  +IA+
Sbjct: 214 EIYTFLVLEYLVLILLVSQAVRWLEKRIAI 243



 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 43/70 (61%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  IG +V    LS +  + WI RVYVEV R+IP LV++ ++
Sbjct: 41  LVAGFNDTIQVSLLSMLFAMTIGLIVALPALSDSPALKWINRVYVEVIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 101 YYGMPTLLDV 110


>gi|134282420|ref|ZP_01769125.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|134246458|gb|EBA46547.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
          Length = 315

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 67/96 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +
Sbjct: 181 EFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIAL 240

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 241 PPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETET 276


>gi|307710648|ref|ZP_07647081.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
 gi|307618591|gb|EFN97734.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
          Length = 233

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y SL   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221


>gi|24112048|ref|NP_706558.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 301]
 gi|30062159|ref|NP_836330.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 2457T]
 gi|157160141|ref|YP_001457459.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli HS]
 gi|170020990|ref|YP_001725944.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|188495911|ref|ZP_03003181.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli 53638]
 gi|300920531|ref|ZP_07136957.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|24050872|gb|AAN42265.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 301]
 gi|30040404|gb|AAP16136.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 2457T]
 gi|157065821|gb|ABV05076.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli HS]
 gi|169755918|gb|ACA78617.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|188491110|gb|EDU66213.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli 53638]
 gi|281600012|gb|ADA72996.1| Glutamate/aspartate transport system permease [Shigella flexneri
           2002017]
 gi|300412470|gb|EFJ95780.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|313649701|gb|EFS14125.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           flexneri 2a str. 2457T]
          Length = 224

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   V+W  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|295835695|ref|ZP_06822628.1| glutamate permease [Streptomyces sp. SPB74]
 gi|197698111|gb|EDY45044.1| glutamate permease [Streptomyces sp. SPB74]
          Length = 214

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VP+GQ EAA +LG++  +    V+LPQA RS+IPP+ SQ
Sbjct: 89  LALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVILPQAFRSVIPPVGSQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
            + L KNS++A A    +L+    T +N+ G  I  + +W+ + YL L++ I+   N L 
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGFDIVWVFVWIAVGYLLLTLAISALFNYLE 207

Query: 390 AK 391
            +
Sbjct: 208 HR 209


>gi|312898833|ref|ZP_07758221.1| putative glutamine ABC transporter permease protein [Megasphaera
           micronuciformis F0359]
 gi|310619995|gb|EFQ03567.1| putative glutamine ABC transporter permease protein [Megasphaera
           micronuciformis F0359]
          Length = 219

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 119/206 (57%), Gaps = 17/206 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F+LG+++S+   RLS     K  KA+ + Y++  +I G P LV I L Y   F  P   
Sbjct: 31  GFLLGLIISV--CRLS---GIKLLKAVSVCYVN--VIRGTPMLVQIFLIY---FALPQ-- 78

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               + G+ + P F++  +A S  + A+++EI R+G+ +V +GQMEA  +LGL+  +   
Sbjct: 79  ----VLGTRIDP-FLAAVLACSINSGAYVSEIFRAGIQSVDKGQMEAGRSLGLSWMQTMF 133

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA + +IPPL ++++++ K ++    +GF +L   G  II++T  A+EI L    
Sbjct: 134 YIILPQAFKHVIPPLGNEFISMTKETAQVSVIGFEELTRRGQLIISKTYGALEIWLAVAV 193

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           +YL +++ IA  ++ L  + A  ++ 
Sbjct: 194 LYLIMTLGIAQLVSYLERRFATDDRN 219


>gi|187733618|ref|YP_001879338.1| glutamate/aspartate ABC transporter permease GltK [Shigella boydii
           CDC 3083-94]
 gi|187430610|gb|ACD09884.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Shigella boydii CDC 3083-94]
          Length = 224

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 39/68 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  VL  L
Sbjct: 76  YLIVLGFL 83


>gi|313902270|ref|ZP_07835675.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467421|gb|EFR62930.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermaerobacter subterraneus DSM 13965]
          Length = 375

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 20/210 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            SF LG++L+L      R       +AL + YI   L+ G P +V+      L F    L
Sbjct: 182 LSFPLGVLLAL-----GRVSSLPVVRALSIAYIE--LVRGTPLMVV------LFFSMTAL 228

Query: 252 GQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             F      +V P+ ++   A L  +TAA++AE VR GL  VPRGQ+EAA ALGLT  +A
Sbjct: 229 PLFL---PPSVRPDLVTRAAAGLVLFTAAYVAEAVRGGLQGVPRGQVEAAQALGLTGTQA 285

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367
             L++LPQA+R++IP L  Q+++L K++SL    G  + V V  ++++     G+ +E+ 
Sbjct: 286 VLLIILPQALRAVIPALVGQFISLFKDTSLVAVWGLLEFVGVAQSVLSNPSYLGRHVEMY 345

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +Y      ++L   RL  ++ + E+
Sbjct: 346 AFVAAVYWVFCYGMSLASRRLERRLGVGER 375


>gi|220913268|ref|YP_002488577.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219860146|gb|ACL40488.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 216

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS YTAAFIAE VRSG+ +VP GQ EAA ++G+   +   L++LPQA+R++IPPL + 
Sbjct: 90  IALSTYTAAFIAEAVRSGVNSVPVGQAEAARSIGMGFGQVLSLIILPQALRTVIPPLINI 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
            + L+KNSS+A A    +L   G  + N  G A I ++L   F YL L++ + +  + + 
Sbjct: 150 LIALVKNSSVAGAFFVLELFGYGRQLANANGDAVITVLLGTAFFYLLLTVPLGILASTVE 209

Query: 390 AKIALKE 396
            K+A+  
Sbjct: 210 RKVAIAR 216



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 92  GFVNTFWL-AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           GF+ T +L A SG+I A ++GTL+ A R+S    +     VYVEV RN P  +  FF
Sbjct: 14  GFLRTLFLSAVSGVI-ALVLGTLLAAARVSPVAALRGFSTVYVEVLRNTPLTIAFFF 69


>gi|260425536|ref|ZP_05779516.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Citreicella sp. SE45]
 gi|260423476|gb|EEX16726.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Citreicella sp. SE45]
          Length = 263

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 16/211 (7%)

Query: 190 FVFSFVLGI---VLSLFATRLSRH---FHEKTGKALPLLYISTFLIFGL-PTLVLIALKY 242
           F  +  LG+   ++SL   RL R    F+ +  + +P+L +  ++ F L P LV      
Sbjct: 55  FALASALGMGVALMSLSDHRLPRQLARFYTEIVRGIPMLVLLLYVAFVLAPALV------ 108

Query: 243 QLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                   LG        T   P      +AL+   +AFIAE+ R+GL++V  GQ+EAA 
Sbjct: 109 --ELRNWALGWLGVEPARTRDFPLVWRAILALTIGYSAFIAEVFRAGLLSVDEGQVEAAQ 166

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL+  +  RL++LPQA+R+I+PPL + ++ ++K+SSL   +G  D+  +G        
Sbjct: 167 ALGLSRYQRFRLIVLPQAIRTILPPLGNDFVAMVKDSSLVSVLGVLDVTQLGKVTAAGNF 226

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  E   +   IYL+++I ++L + RL A++
Sbjct: 227 RYFETYNVVALIYLTMTITLSLALRRLEARL 257


>gi|269127496|ref|YP_003300866.1| polar amino acid ABC transporter inner membrane subunit
           [Thermomonospora curvata DSM 43183]
 gi|268312454|gb|ACY98828.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermomonospora curvata DSM 43183]
          Length = 343

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 19/177 (10%)

Query: 197 GIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLV--LIALKYQLHF 246
           GIV  L   RLS H+  +          +A+PLL I  FL F +P  +  +IA     + 
Sbjct: 89  GIVFGL--ARLSDHWWIRWPAGAVVEFFRAIPLL-ILIFLAFFVPPAISPIIADSPLGNL 145

Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + V+    F+       G+   P F +L   L  Y  + +AE+VR+G++AVPRGQ EAA
Sbjct: 146 QRIVVQNVLFVFGVEINAGNVTVPAFAALVFGLVMYNGSVLAEVVRAGVLAVPRGQSEAA 205

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
            ALGL      RLVLLPQA+ +++P + SQ + LLK+++L   + FADL+S G  I+
Sbjct: 206 YALGLRKNAVMRLVLLPQAITAMMPAVVSQMVVLLKDTALGFVIAFADLLSAGFRIV 262


>gi|227358520|ref|ZP_03842845.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
 gi|227161231|gb|EEI46305.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
          Length = 264

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +ALGLT  +  R VLLP A R IIP
Sbjct: 129 FVSSALCLGLFTAARMCEQVRAAINSLPRGQKAAGLALGLTLPQTYRYVLLPNAYRVIIP 188

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +    +++ + +A E        Y+ ++++I L M
Sbjct: 189 PMTSEMLNLVKNSAIASTIGLIDMAAQANKLLDYSAKAYESFTAITLAYVFINVIIMLIM 248

Query: 386 NRLNAKIAL 394
           + L  ++ L
Sbjct: 249 HWLEKRVRL 257



 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)

Query: 65  SERAGFEIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            E    + D GI     P+  +++Y   ++ GF  T  L+    I A I+G+  G  R  
Sbjct: 16  GEIMSIDWDWGIFFQEAPF-GNTTYLGWLISGFQVTVALSLCAWIIAFIVGSFFGILRTV 74

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            N+L++ +  +YVE+FRN+P +V  F  Y  +  +LP
Sbjct: 75  PNRLLSSLGAIYVELFRNVPLIVQFFTWYLVIPELLP 111


>gi|241113736|ref|YP_002973571.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861944|gb|ACS59610.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 309

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 117/215 (54%), Gaps = 10/215 (4%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +  +GIVL L    ++R  +++  ++L  L+I  F   G P LV +   Y L    P 
Sbjct: 81  VVAMAIGIVLGL-GLAIARLSNDRLARSLASLFIWFFR--GTPLLVQLIFWYNLSTLFPQ 137

Query: 251 LGQFNFIGGSTVSPEFMSLY-------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      G +  S E  S+        + L+   AA++AEI+R GL++V RGQ E A A 
Sbjct: 138 LSIAIPFGPTLASWETNSVITPMTAAIVGLALNEAAYMAEIIRGGLLSVDRGQFETAEAF 197

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +A   +++PQAMRSI+PP  +Q ++++K +SL   +  ADL+    +I N+T + 
Sbjct: 198 GMTKARALWRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQSIYNRTFEI 257

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + ++L+ +  YL ++ ++ L  + + A     E++
Sbjct: 258 VPMLLVAVLWYLLITSILNLGQSYIEAYYGRSERR 292


>gi|320178443|gb|EFW53411.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella boydii ATCC 9905]
 gi|332094325|gb|EGI99376.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           boydii 5216-82]
          Length = 224

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIKSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|315292092|gb|EFU51444.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
          Length = 224

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|170767753|ref|ZP_02902206.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia albertii TW07627]
 gi|170123241|gb|EDS92172.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia albertii TW07627]
          Length = 224

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 ISYLKRRTA 224



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|134294748|ref|YP_001118483.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134137905|gb|ABO53648.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia vietnamiensis
           G4]
          Length = 246

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMAFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK +A +  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAALGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFVWYLVVPELLP 94


>gi|169835617|ref|ZP_02868805.1| Amino acid transport system permease protein [candidate division
           TM7 single-cell isolate TM7a]
          Length = 194

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 13/171 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV + + Y +     V G +NF+      P+     IA      A+I EI+R 
Sbjct: 36  IIRGTPLLVQLLIMYYV-----VFGSYNFM------PKIFVAAIAFGINAGAYIGEIIRG 84

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++  GQMEAA +LGL+  +A RLV+LPQA+++ +P L S+++ LLK +S+   +G  
Sbjct: 85  GIESIDNGQMEAARSLGLSSWQAMRLVILPQALKNSLPSLISEFIALLKETSIVGWIGLN 144

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           D++     I  QT  A E +     IYL+L+ +      R+  K  LKE  
Sbjct: 145 DIMRGADNIRFQTATAFESLFAAALIYLALTAIFTRVATRVERK--LKEDD 193


>gi|300697046|ref|YP_003747707.1| amino acid transmembrane ABC transporter protein [Ralstonia
           solanacearum CFBP2957]
 gi|299073770|emb|CBJ53291.1| putative amino acid transmembrane ABC transporter protein
           [Ralstonia solanacearum CFBP2957]
          Length = 262

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 84/134 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +LGL+       V+ PQA +  +
Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL + ++ LLK+SSLA A+G  +L +VG  +   T Q +  ++    IYL+L+ ++  F
Sbjct: 188 PPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247

Query: 385 MNRLNAKIALKEKK 398
            N +  ++ ++ ++
Sbjct: 248 SNAVEQRMDVEGRR 261


>gi|15800367|ref|NP_286379.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 EDL933]
 gi|15829946|ref|NP_308719.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. Sakai]
 gi|16128636|ref|NP_415186.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|26246627|ref|NP_752667.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli CFT073]
 gi|74311189|ref|YP_309608.1| glutamate/aspartate transport system permease [Shigella sonnei
           Ss046]
 gi|82775930|ref|YP_402277.1| glutamate/aspartate transport system permease [Shigella dysenteriae
           Sd197]
 gi|89107522|ref|AP_001302.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|91209694|ref|YP_539680.1| glutamate/aspartate transport system permease [Escherichia coli
           UTI89]
 gi|110640875|ref|YP_668603.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli 536]
 gi|117622862|ref|YP_851775.1| glutamate/aspartate transport system permease [Escherichia coli
           APEC O1]
 gi|168752223|ref|ZP_02777245.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758296|ref|ZP_02783303.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764670|ref|ZP_02789677.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767100|ref|ZP_02792107.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4486]
 gi|168777606|ref|ZP_02802613.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779144|ref|ZP_02804151.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4076]
 gi|168786503|ref|ZP_02811510.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC869]
 gi|168802437|ref|ZP_02827444.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC508]
 gi|170080232|ref|YP_001729552.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170080333|ref|YP_001729653.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|191168676|ref|ZP_03030456.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli B7A]
 gi|191173970|ref|ZP_03035488.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli F11]
 gi|193063459|ref|ZP_03044549.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E22]
 gi|193069122|ref|ZP_03050080.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E110019]
 gi|194429740|ref|ZP_03062256.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli B171]
 gi|194439897|ref|ZP_03071960.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli 101-1]
 gi|195939391|ref|ZP_03084773.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli O157:H7 str. EC4024]
 gi|208809671|ref|ZP_03252008.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4206]
 gi|208815262|ref|ZP_03256441.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4045]
 gi|208823066|ref|ZP_03263384.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397952|ref|YP_002269288.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4115]
 gi|209917914|ref|YP_002291998.1| glutamate/aspartate ABC transporter permease [Escherichia coli
           SE11]
 gi|215485686|ref|YP_002328117.1| glutamate/aspartate transport system permease GltK; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|217325840|ref|ZP_03441924.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. TW14588]
 gi|218553195|ref|YP_002386108.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli IAI1]
 gi|218557584|ref|YP_002390497.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli S88]
 gi|218688469|ref|YP_002396681.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli ED1a]
 gi|218694093|ref|YP_002401760.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli 55989]
 gi|218699018|ref|YP_002406647.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli IAI39]
 gi|227884374|ref|ZP_04002179.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein GltK [Escherichia coli
           83972]
 gi|237707380|ref|ZP_04537861.1| glutamate/aspartate transport system permease gltK [Escherichia sp.
           3_2_53FAA]
 gi|238899930|ref|YP_002925726.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|253774363|ref|YP_003037194.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160732|ref|YP_003043840.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|254791817|ref|YP_003076654.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli O157:H7 str. TW14359]
 gi|256020605|ref|ZP_05434470.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Shigella sp. D9]
 gi|256023735|ref|ZP_05437600.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Escherichia sp. 4_1_40B]
 gi|260842879|ref|YP_003220657.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O103:H2 str. 12009]
 gi|260853904|ref|YP_003227795.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O26:H11 str. 11368]
 gi|260866801|ref|YP_003233203.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O111:H- str. 11128]
 gi|261224122|ref|ZP_05938403.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257816|ref|ZP_05950349.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H7 str. FRIK966]
 gi|291281603|ref|YP_003498421.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli O55:H7 str. CB9615]
 gi|293413949|ref|ZP_06656598.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli B185]
 gi|293418765|ref|ZP_06661200.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli B088]
 gi|297519698|ref|ZP_06938084.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli OP50]
 gi|300817827|ref|ZP_07098041.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300823030|ref|ZP_07103164.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300907831|ref|ZP_07125447.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300927242|ref|ZP_07142973.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300931588|ref|ZP_07146900.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300937880|ref|ZP_07152672.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300951153|ref|ZP_07165017.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300959227|ref|ZP_07171303.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300989988|ref|ZP_07179064.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300996684|ref|ZP_07181509.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|301025220|ref|ZP_07188789.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|301028864|ref|ZP_07192039.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301049843|ref|ZP_07196782.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|301302135|ref|ZP_07208268.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301329182|ref|ZP_07222175.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301643931|ref|ZP_07243958.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306812922|ref|ZP_07447115.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli NC101]
 gi|307137270|ref|ZP_07496626.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli H736]
 gi|307312631|ref|ZP_07592263.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309786313|ref|ZP_07680939.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           dysenteriae 1617]
 gi|309795479|ref|ZP_07689896.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331641157|ref|ZP_08342292.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H736]
 gi|331645810|ref|ZP_08346913.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli M605]
 gi|331651666|ref|ZP_08352685.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli M718]
 gi|331656673|ref|ZP_08357635.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA206]
 gi|331667007|ref|ZP_08367881.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA271]
 gi|331672185|ref|ZP_08372977.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA280]
 gi|331676313|ref|ZP_08377025.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H591]
 gi|331682070|ref|ZP_08382694.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H299]
 gi|84028711|sp|P0AER7|GLTK_ECO57 RecName: Full=Glutamate/aspartate transport system permease protein
           gltK
 gi|84028712|sp|P0AER6|GLTK_ECOL6 RecName: Full=Glutamate/aspartate transport system permease protein
           gltK
 gi|84028713|sp|P0AER5|GLTK_ECOLI RecName: Full=Glutamate/aspartate transport system permease protein
           gltK
 gi|12513560|gb|AAG54987.1|AE005244_5 glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. EDL933]
 gi|26107026|gb|AAN79210.1|AE016757_114 Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli CFT073]
 gi|624631|gb|AAA60981.1| GltK [Escherichia coli]
 gi|1651272|dbj|BAA35305.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K12 substr. W3110]
 gi|1778571|gb|AAB40854.1| glutamate/aspartate transport system permease protein [Escherichia
           coli]
 gi|1786873|gb|AAC73754.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13360150|dbj|BAB34115.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. Sakai]
 gi|73854666|gb|AAZ87373.1| glutamate/aspartate transport system permease [Shigella sonnei
           Ss046]
 gi|81240078|gb|ABB60788.1| glutamate/aspartate transport system permease [Shigella dysenteriae
           Sd197]
 gi|91071268|gb|ABE06149.1| glutamate/aspartate transport system permease [Escherichia coli
           UTI89]
 gi|110342467|gb|ABG68704.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli 536]
 gi|115511986|gb|ABJ00061.1| glutamate/aspartate transport system permease [Escherichia coli
           APEC O1]
 gi|169888067|gb|ACB01774.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|169888168|gb|ACB01875.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187767199|gb|EDU31043.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013883|gb|EDU52005.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002805|gb|EDU71791.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354839|gb|EDU73258.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363542|gb|EDU81961.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365363|gb|EDU83779.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373588|gb|EDU92004.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC869]
 gi|189375558|gb|EDU93974.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC508]
 gi|190901268|gb|EDV61037.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli B7A]
 gi|190905746|gb|EDV65367.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli F11]
 gi|192931043|gb|EDV83647.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E22]
 gi|192957666|gb|EDV88111.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E110019]
 gi|194412221|gb|EDX28527.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli B171]
 gi|194421191|gb|EDX37215.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli 101-1]
 gi|208729472|gb|EDZ79073.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4206]
 gi|208731910|gb|EDZ80598.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4045]
 gi|208737259|gb|EDZ84943.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4042]
 gi|209159352|gb|ACI36785.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4115]
 gi|209776928|gb|ACI86776.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776930|gb|ACI86777.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776932|gb|ACI86778.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776934|gb|ACI86779.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776936|gb|ACI86780.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209911173|dbj|BAG76247.1| glutamate/aspartate ABC transporter permease component [Escherichia
           coli SE11]
 gi|215263758|emb|CAS08094.1| glutamate/aspartate transport system permease GltK; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|217322061|gb|EEC30485.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. TW14588]
 gi|218350825|emb|CAU96519.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli 55989]
 gi|218359963|emb|CAQ97507.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli IAI1]
 gi|218364353|emb|CAR02028.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli S88]
 gi|218369004|emb|CAR16758.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli IAI39]
 gi|218426033|emb|CAR06850.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli ED1a]
 gi|222032406|emb|CAP75145.1| glutamate/aspartate transport system permease protein [Escherichia
           coli LF82]
 gi|226898590|gb|EEH84849.1| glutamate/aspartate transport system permease gltK [Escherichia sp.
           3_2_53FAA]
 gi|227838460|gb|EEJ48926.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein GltK [Escherichia coli
           83972]
 gi|238861326|gb|ACR63324.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|242376426|emb|CAQ31128.1| gltK, subunit of GltIJKL glutamate ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253325407|gb|ACT30009.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972633|gb|ACT38304.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|253976827|gb|ACT42497.1| glutamate and aspartate transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|254591217|gb|ACT70578.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257752553|dbj|BAI24055.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O26:H11 str. 11368]
 gi|257758026|dbj|BAI29523.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O103:H2 str. 12009]
 gi|257763157|dbj|BAI34652.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O111:H- str. 11128]
 gi|260450180|gb|ACX40602.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177801|dbj|BAI54131.1| glutamate/aspartate ABC transporter permease component [Escherichia
           coli SE15]
 gi|284920453|emb|CBG33514.1| glutamate/aspartate ABC transporter, permease protein [Escherichia
           coli 042]
 gi|290761476|gb|ADD55437.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli O55:H7 str. CB9615]
 gi|291325293|gb|EFE64708.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli B088]
 gi|291434007|gb|EFF06980.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli B185]
 gi|294491939|gb|ADE90695.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli IHE3034]
 gi|299878152|gb|EFI86363.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300298395|gb|EFJ54780.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300304462|gb|EFJ58982.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300314172|gb|EFJ63956.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300396149|gb|EFJ79687.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300400463|gb|EFJ84001.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300407263|gb|EFJ90801.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300416792|gb|EFK00103.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300449582|gb|EFK13202.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300457105|gb|EFK20598.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300460612|gb|EFK24105.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300524379|gb|EFK45448.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529524|gb|EFK50586.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300842687|gb|EFK70447.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300844487|gb|EFK72247.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301077701|gb|EFK92507.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|305853685|gb|EFM54124.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli NC101]
 gi|306907333|gb|EFN37838.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307552516|gb|ADN45291.1| glutamate/aspartate transport system permease protein [Escherichia
           coli ABU 83972]
 gi|307627916|gb|ADN72220.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli UM146]
 gi|308120854|gb|EFO58116.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|308925707|gb|EFP71188.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           dysenteriae 1617]
 gi|309700892|emb|CBJ00189.1| glutamate/aspartate ABC transporter, permease protein [Escherichia
           coli ETEC H10407]
 gi|312945193|gb|ADR26020.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|315059908|gb|ADT74235.1| glutamate and aspartate transporter subunit [Escherichia coli W]
 gi|315135319|dbj|BAJ42478.1| glutamate/aspartate transport system permease protein gltK
           [Escherichia coli DH1]
 gi|315255041|gb|EFU35009.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315287082|gb|EFU46496.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315299180|gb|EFU58434.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|315616425|gb|EFU97042.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 3431]
 gi|320193059|gb|EFW67699.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. EC1212]
 gi|320194172|gb|EFW68804.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli WV_060327]
 gi|320198222|gb|EFW72826.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli EC4100B]
 gi|320638104|gb|EFX07868.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H7 str. G5101]
 gi|320643508|gb|EFX12678.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H- str. 493-89]
 gi|320648843|gb|EFX17470.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H- str. H 2687]
 gi|320654427|gb|EFX22474.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320660109|gb|EFX27639.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320664907|gb|EFX32042.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H7 str. LSU-61]
 gi|323153622|gb|EFZ39870.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli EPECa14]
 gi|323158893|gb|EFZ44904.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli E128010]
 gi|323163914|gb|EFZ49723.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           sonnei 53G]
 gi|323170777|gb|EFZ56427.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli LT-68]
 gi|323179870|gb|EFZ65427.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1180]
 gi|323184992|gb|EFZ70359.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1357]
 gi|323191285|gb|EFZ76549.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli RN587/1]
 gi|323379528|gb|ADX51796.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323938415|gb|EGB34669.1| inner membrane transport system [Escherichia coli E1520]
 gi|323943068|gb|EGB39227.1| inner membrane transport system [Escherichia coli E482]
 gi|323945128|gb|EGB41190.1| inner membrane transport system [Escherichia coli H120]
 gi|323952776|gb|EGB48644.1| inner membrane transport system [Escherichia coli H252]
 gi|323958405|gb|EGB54111.1| inner membrane transport system [Escherichia coli H263]
 gi|323963221|gb|EGB58789.1| inner membrane transport system [Escherichia coli H489]
 gi|323972108|gb|EGB67322.1| inner membrane transport system [Escherichia coli TA007]
 gi|324006308|gb|EGB75527.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324010470|gb|EGB79689.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|324016084|gb|EGB85303.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324116727|gb|EGC10642.1| inner membrane transport system [Escherichia coli E1167]
 gi|326341403|gb|EGD65195.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. 1044]
 gi|326345817|gb|EGD69556.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. 1125]
 gi|331037955|gb|EGI10175.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H736]
 gi|331044562|gb|EGI16689.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli M605]
 gi|331049944|gb|EGI22002.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli M718]
 gi|331054921|gb|EGI26930.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA206]
 gi|331066231|gb|EGI38115.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA271]
 gi|331070652|gb|EGI42015.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA280]
 gi|331076371|gb|EGI47653.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H591]
 gi|331080749|gb|EGI51923.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H299]
 gi|332104146|gb|EGJ07492.1| glutamate and aspartate transporter subunit [Shigella sp. D9]
          Length = 224

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|313890948|ref|ZP_07824570.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313120672|gb|EFR43789.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 724

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGIPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ A+P GQMEA+ +LG+ ++   R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAIPAGQMEASRSLGIPYKLTMRKVILPQAVKVMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723


>gi|312965093|ref|ZP_07779330.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 2362-75]
 gi|312290184|gb|EFR18067.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 2362-75]
          Length = 224

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLNGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|82543096|ref|YP_407043.1| glutamate-aspartate transport system permease [Shigella boydii
           Sb227]
 gi|81244507|gb|ABB65215.1| glutamate-aspartate transport system permease [Shigella boydii
           Sb227]
 gi|320185368|gb|EFW60138.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella flexneri CDC 796-83]
 gi|332097727|gb|EGJ02701.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           boydii 3594-74]
          Length = 224

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV +FR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNIFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|239982244|ref|ZP_04704768.1| permease [Streptomyces albus J1074]
          Length = 315

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 123/244 (50%), Gaps = 20/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           IPD+        F N+R LS    T+       V   V G++L++   RLS++       
Sbjct: 63  IPDY--------FFNDRILSGVRETLILTVLSMVIGVVGGVLLAVM--RLSKN---PVVS 109

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++   YI  F   G P LV + + + L F  +   LG F     S     F++  + L  
Sbjct: 110 SIAWFYIWFFR--GTPVLVQLFVWFNLGFVFEYMNLGPFYKDEWSDFMTPFLTALLGLGL 167

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA++AEI R+GL++V  GQ EAA ALG++  K  R ++LPQAMR I+PP  ++ +N+L
Sbjct: 168 NEAAYMAEICRAGLLSVDEGQTEAAHALGMSQGKTLRRIVLPQAMRVIVPPTGNEVINML 227

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKI 392
           K +SL  AV + +L      I   +G  +E + +   W  I  S+  +   ++ R  A+ 
Sbjct: 228 KTTSLVAAVQYYELFKHAQDIGMTSGATVEALFLAATWYLILTSILSIGQYYIERYYARG 287

Query: 393 ALKE 396
           +L++
Sbjct: 288 SLRQ 291


>gi|116619007|ref|YP_819378.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116097854|gb|ABJ63005.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 213

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 76/122 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS YT+AFIAE VR+G+++V  GQME A A GL+  ++ R ++LPQA +  +P L +Q
Sbjct: 88  IALSLYTSAFIAETVRAGILSVDNGQMEGARANGLSFNQSMRYIVLPQAFKIALPSLGNQ 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+KNSS+   VG  DL+  G  +   T       +I    YL +++ ++ +M  L  
Sbjct: 148 FINLVKNSSILAFVGGLDLMYQGNMVAATTFDTFSTYIIVALFYLVITLPLSYYMQNLER 207

Query: 391 KI 392
           K+
Sbjct: 208 KL 209



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T   +   +I + I+GT     ++   K    I  VYV+VFRNIP L++ FF +
Sbjct: 12  LQGFGYTLLSSIIALIISMILGTFFAILQILPQKWAQKIGNVYVQVFRNIPLLIITFFFF 71

Query: 150 KSVLSVLPI 158
             V  V+P+
Sbjct: 72  LVVAKVIPM 80


>gi|167461573|ref|ZP_02326662.1| glutamine ABC transporter (permease) [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322381528|ref|ZP_08055507.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154535|gb|EFX46832.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 217

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 83/122 (68%), Gaps = 4/122 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT+AFIAE +R+G++AVP+GQ+EA  + GLT+ +  + ++L QA++ +IPPL +Q
Sbjct: 92  IGLAIYTSAFIAEAIRAGILAVPKGQVEAGRSSGLTYLQTMQYIVLLQAIKIVIPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMN 386
           +LNL+KNSS+   V   DL+  G  I ++T    G  I + + ++ + + LS++I++   
Sbjct: 152 FLNLIKNSSVLGVVAGLDLMYFGDLINSETFKVFGTYIFVAMFYLLLTIPLSLIISILER 211

Query: 387 RL 388
           RL
Sbjct: 212 RL 213



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF NT   +   +  + ++G +    R+S  +L+  I   YVE FRNIP L+++ F Y
Sbjct: 17  GFGNTVKASLLALAGSFVLGVIFAVMRISTFRLLRIIGTAYVEFFRNIPLLLIVMFFY 74


>gi|309791170|ref|ZP_07685702.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
 gi|308226732|gb|EFO80428.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
          Length = 393

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 18/218 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LTM  ++   + SF LG++L+L      R  +    K   + YI   LI G+P   L+ +
Sbjct: 185 LTMILSSSGIILSFPLGVLLAL-----GRRSNLPIIKGFCVAYIE--LIRGVP---LVTV 234

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +      P+     F+         +   +A++ ++AA++AE VR GL ++PRGQ EAA
Sbjct: 235 LFMAQLMLPL-----FLPDQVRIDSVLRAMVAVTLFSAAYLAENVRGGLQSLPRGQTEAA 289

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL   + T L+ LPQA+R++IP L  Q+++L K++SL V VG  DL+ +  TI +Q 
Sbjct: 290 RALGLNPVQTTLLITLPQALRAVIPVLVGQFISLFKDTSLVVIVGLIDLLGIARTIYSQA 349

Query: 361 GQAIEIILIWMFIYLSLSIMIALF---MNRLNAKIALK 395
                   +W    L ++++  +F   M+R + KI  K
Sbjct: 350 EWKDFTGGVWRETLLVVALIYWIFSFTMSRTSKKIEEK 387


>gi|311895158|dbj|BAJ27566.1| putative glutamate ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 214

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 2/134 (1%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    +AL CYT+AF+ E +RSG+  VP GQ EAA +LGLT  +  RLV+LPQA RS+
Sbjct: 82  PFFTFAVLALGCYTSAFVCETLRSGVNTVPTGQGEAARSLGLTFGQTLRLVVLPQAYRSV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIA 382
           + PL S  + L KN+++A +    +L+    T IN+ G  I    +W+   YL L++ I+
Sbjct: 142 VAPLGSVMIALAKNTAIAGSFSVVELLGTYRT-INELGYDIVWTFVWIAAGYLVLTLAIS 200

Query: 383 LFMNRLNAKIALKE 396
              N L  ++A+  
Sbjct: 201 ALFNLLERRVAVSR 214



 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T WL     + A ++G +V   R+S  K +      +V V RN  PL ++FF+   
Sbjct: 14  GFLGTLWLTLVSAVLALVLGAVVAGFRVSPVKPLRVFGTGWVTVLRNT-PLTLLFFIV-- 70

Query: 152 VLSVLPIPDHSIVLPFGMF 170
              VL +P   I LPF  F
Sbjct: 71  ---VLGLPRFDITLPFFTF 86


>gi|197284336|ref|YP_002150208.1| glutamate/aspartate ABC transporter permease [Proteus mirabilis
           HI4320]
 gi|194681823|emb|CAR41084.1| glutamate/aspartate ABC transporter, permease protein [Proteus
           mirabilis HI4320]
          Length = 246

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +ALGLT  +  R VLLP A R IIP
Sbjct: 111 FVSSALCLGLFTAARMCEQVRAAINSLPRGQKAAGLALGLTLPQTYRYVLLPNAYRVIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +    +++ + +A E        Y+ ++++I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLIDMAAQANKLLDYSAKAYESFTAITLAYVFINVIIMLIM 230

Query: 386 NRLNAKIAL 394
           + L  ++ L
Sbjct: 231 HWLEKRVRL 239



 Score = 43.1 bits (100), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 71  EIDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           + D GI     P+  +++Y   ++ GF  T  L+    I A I+G+  G  R   N+L++
Sbjct: 4   DWDWGIFFQEAPF-GNTTYLGWLISGFQVTVALSLCAWIIAFIVGSFFGILRTVPNRLLS 62

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            +  +YVE+FRN+P +V  F  Y  +  +LP
Sbjct: 63  SLGAIYVELFRNVPLIVQFFTWYLVIPELLP 93


>gi|73541283|ref|YP_295803.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72118696|gb|AAZ60959.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 222

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 83/131 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   I L  Y+ A+++EIVR  + +V +GQMEAA ++G++  +A R V+LPQA+  +
Sbjct: 87  PAFVCGVIGLGVYSGAYVSEIVRGAIQSVEKGQMEAARSIGMSSGQAMRAVILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +  ADL+  G  II+ + +++E+ L    +YL L+    L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAIALVYLILTSAAGL 206

Query: 384 FMNRLNAKIAL 394
            + R   ++ +
Sbjct: 207 ILRRAEQRLRM 217


>gi|83748398|ref|ZP_00945421.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum
           UW551]
 gi|207738968|ref|YP_002257361.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83724914|gb|EAP72069.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum
           UW551]
 gi|206592339|emb|CAQ59245.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 262

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 84/134 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +LGL+       V+ PQA +  +
Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL + ++ LLK+SSLA A+G  +L +VG  +   T Q +  ++    IYL+L+ ++  F
Sbjct: 188 PPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLTLTTVLTQF 247

Query: 385 MNRLNAKIALKEKK 398
            N +  ++ ++ ++
Sbjct: 248 SNAVEQRMDVEGRQ 261


>gi|199599084|ref|ZP_03212490.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229553194|ref|ZP_04441919.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258509002|ref|YP_003171753.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258540196|ref|YP_003174695.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|199590047|gb|EDY98147.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229313490|gb|EEN79463.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257148929|emb|CAR87902.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257151872|emb|CAR90844.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259650295|dbj|BAI42457.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 214

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  YT+AFIAE VR+G+ AVP GQME A ++G+T+ +A   ++ PQA + +IPPL +Q
Sbjct: 90  IGLLIYTSAFIAETVRAGIEAVPSGQMEGARSIGMTYTQAMTQIIFPQAFKIVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I   T    +  LI    YL L++ ++  M  L 
Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGKLIAATTFSTFDTYLIVGIFYLILTMPLSYLMRYLE 208

Query: 390 AK 391
            K
Sbjct: 209 KK 210


>gi|91225414|ref|ZP_01260536.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269966668|ref|ZP_06180747.1| polar amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 40B]
 gi|91189777|gb|EAS76050.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269828735|gb|EEZ82990.1| polar amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 40B]
          Length = 265

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 121/241 (50%), Gaps = 19/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     +    +T++ +A    F+ VLG+V +L   RLS     K G 
Sbjct: 43  VPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL--RLS---DSKVGN 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +   Y+   +I   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 98  VIGTTYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SS+   +   DL +    I+++T    EI      IYL+L++ ++     L  K+    +
Sbjct: 204 SSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263

Query: 398 K 398
           K
Sbjct: 264 K 264


>gi|319639192|ref|ZP_07993943.1| amino acid ABC transporter [Neisseria mucosa C102]
 gi|317399376|gb|EFV80046.1| amino acid ABC transporter [Neisseria mucosa C102]
          Length = 248

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 77/121 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALVANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L  V  TI  +     E +     IYL L+ ++     RL +
Sbjct: 182 FITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSVLGWVFLRLES 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|83746635|ref|ZP_00943685.1| GltJ [Ralstonia solanacearum UW551]
 gi|207727925|ref|YP_002256319.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           MolK2]
 gi|207742330|ref|YP_002258722.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           IPO1609]
 gi|83726769|gb|EAP73897.1| GltJ [Ralstonia solanacearum UW551]
 gi|206591167|emb|CAQ56779.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           MolK2]
 gi|206593720|emb|CAQ60647.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           IPO1609]
          Length = 242

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP A R I+P
Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M
Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIM 226

Query: 386 NRLNAKIAL 394
             + A+  L
Sbjct: 227 RWVEARTRL 235



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 45/81 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A ++G+++G  R   NK+++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPNKVLSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDH 161
            +V +F  Y  +  ++P  D+
Sbjct: 76  LIVQLFIWYFVMPELVPGGDY 96


>gi|323967600|gb|EGB63016.1| inner membrane transport system [Escherichia coli M863]
 gi|323976364|gb|EGB71454.1| inner membrane transport system [Escherichia coli TW10509]
 gi|325498168|gb|EGC96027.1| glutamate/aspartate transport system permease [Escherichia
           fergusonii ECD227]
 gi|327254338|gb|EGE65960.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli STEC_7v]
          Length = 224

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITITAVVIGILWGTMLAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|307706135|ref|ZP_07642954.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307618535|gb|EFN97683.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
          Length = 225

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 43/238 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI     +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
              PLL     + +GLP +           D  ++            P + +  + +  Y
Sbjct: 68  ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+K
Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           N+S    +   DL+ V  +     G  I   L    +Y SL   +A F   M + N K
Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKMEQANKK 221



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH+I++P
Sbjct: 80  ----LPLISDHTIMIP 91


>gi|218703987|ref|YP_002411506.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli UMN026]
 gi|293403915|ref|ZP_06647909.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli FVEC1412]
 gi|298379690|ref|ZP_06989295.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli FVEC1302]
 gi|300901164|ref|ZP_07119269.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|331662019|ref|ZP_08362942.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA143]
 gi|218431084|emb|CAR11960.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli UMN026]
 gi|291428501|gb|EFF01526.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli FVEC1412]
 gi|298279388|gb|EFI20896.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli FVEC1302]
 gi|300355403|gb|EFJ71273.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|331060441|gb|EGI32405.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA143]
          Length = 224

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITITAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|47568094|ref|ZP_00238799.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
 gi|47555248|gb|EAL13594.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
          Length = 214

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 30/185 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      V SF++G V+ +        F +  G      + LPLL I  F  F LP 
Sbjct: 21  ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              + LK ++                       ++ +AL+ + AA I+EIVRSGL+++ +
Sbjct: 81  ---VGLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+    
Sbjct: 117 GQMEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176

Query: 355 TIINQ 359
            I  Q
Sbjct: 177 IISGQ 181



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|323493012|ref|ZP_08098148.1| ABC-type glutamine transport system, permease component [Vibrio
           brasiliensis LMG 20546]
 gi|323312748|gb|EGA65876.1| ABC-type glutamine transport system, permease component [Vibrio
           brasiliensis LMG 20546]
          Length = 246

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 29/208 (13%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V +  LG ++SL A       R     + ++ +++P+L +  ++ +G+PTL+ ++L +  
Sbjct: 57  VLAMTLGFIVSLPALSPLKPLRAINRIYVESIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA ALG
Sbjct: 115 ---------------------FWAGVIALTIAESAFMAEVFRGGIQAINRGQHEAAEALG 153

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      +
Sbjct: 154 LNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           EI    +  YL L ++++  +  L  +I
Sbjct: 214 EIYTFLVLEYLVLILIVSQAVRWLEKRI 241



 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 41/70 (58%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  +G +V    LS  K +  I R+YVE  R+IP LV++ ++
Sbjct: 41  LVAGFSDTIQVSLLSMVLAMTLGFIVSLPALSPLKPLRAINRIYVESIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 101 YYGMPTLLDV 110


>gi|269962669|ref|ZP_06177014.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832592|gb|EEZ86706.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 246

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 112/210 (53%), Gaps = 29/210 (13%)

Query: 191 VFSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F+  +G++++L A   S         + +  +++P+L +  ++ +G+PTL+ ++L +  
Sbjct: 57  LFAMTIGLIIALPALSDSPILKWINRVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LG
Sbjct: 115 ---------------------FWAGIIALTIAESAFMAEVFRGGIQAISRGQHEAAESLG 153

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      +
Sbjct: 154 LNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPL 213

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           EI    +  YL L ++++  +  L  +IA+
Sbjct: 214 EIYTFLVLEYLVLILLVSQAVRWLEKRIAI 243



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 44/70 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  IG ++    LS + ++ WI RVYVEV R+IP LV++ ++
Sbjct: 41  LIAGFNDTIQVSLLSMLFAMTIGLIIALPALSDSPILKWINRVYVEVIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 101 YYGMPTLLDV 110


>gi|153836333|ref|ZP_01989000.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|149750235|gb|EDM60980.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
          Length = 265

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 19/218 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +A    F+ VLG+V +L   RLS     K G  +   Y+   +I   P LV I L
Sbjct: 66  VTLNISAISLFFTLVLGLVTALL--RLS---DSKVGNVIGTTYVE--VIRNTPLLVQIYL 118

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +    PV+G             F +  +ALS +  A+ AEI R+GL ++P+GQ EAA
Sbjct: 119 LYFVF--GPVIGL----------DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAA 166

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LGL+     + V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T
Sbjct: 167 QTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTQARNIVSET 226

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               EI      IYL+L++ ++     L  K+    +K
Sbjct: 227 AMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWRK 264


>gi|218549771|ref|YP_002383562.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia fergusonii ATCC 35469]
 gi|218357312|emb|CAQ89947.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia fergusonii ATCC 35469]
 gi|324114774|gb|EGC08742.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 224

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITITAVVIGILWGTLLAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|11497848|ref|NP_069070.1| glutamine ABC transporter, permease protein (glnP) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2650409|gb|AAB91000.1| glutamine ABC transporter, permease protein (glnP) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 224

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 15/166 (9%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV I + Y   F  P +G         + PE   + IALS  + A+IAEIVR+
Sbjct: 65  VIRGTPLLVQILIVY---FGLPAIG-------INLQPEPAGI-IALSICSGAYIAEIVRA 113

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++P GQMEAA +LG+T+ +A R V+ PQA R+I+P L ++++ LLK+SSL   +   
Sbjct: 114 GIESIPIGQMEAARSLGMTYLQAMRYVIFPQAFRNILPALGNEFIALLKDSSLLSVISIV 173

Query: 348 DLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389
           +L  VG  I+N T  A    + + L ++ + + LS ++A    +L 
Sbjct: 174 ELTRVGRQIVNTTFNAWTPFLGVALFYLMMTIPLSRLVAYSQKKLG 219



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 24/41 (58%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IIGT+ G GR+S N L   I   YVEV R  P LV I  +Y
Sbjct: 39  IIGTIAGLGRVSKNPLPFAISTAYVEVIRGTPLLVQILIVY 79


>gi|59713575|ref|YP_206350.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114]
 gi|59481823|gb|AAW87462.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114]
          Length = 264

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 100/190 (52%), Gaps = 20/190 (10%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           T L R  +   GK +  LYI   LI   P LV I L Y             F+ G  +  
Sbjct: 87  TALLRLSNSIVGKTISTLYIE--LIRNTPLLVQIYLLY-------------FVFGPFLGL 131

Query: 265 E-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           E F +  +AL+ +  A+ AEI+RSGLI +P+GQ EA   LGL+   + R V+LPQ +R  
Sbjct: 132 ERFTTAVLALALFQGAYTAEILRSGLINLPKGQFEACKTLGLSQFNSYRYVVLPQVIRKT 191

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSI 379
           +P LT++ ++L+KNSS+   +   DL + G  I++ T    EI      I++ I LSLS 
Sbjct: 192 LPSLTNELVSLVKNSSIVSVMAIFDLTTEGRNIVSDTAMPFEIWFTVAAIYLMITLSLSA 251

Query: 380 MIALFMNRLN 389
           + A    R++
Sbjct: 252 LSAWLEYRMH 261


>gi|329116273|ref|ZP_08244990.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326906678|gb|EGE53592.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 724

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 31/207 (14%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++G++  + A   S+     +       + +PL+ ++ F+ +G+P L+     +Q
Sbjct: 532 FAIAMIIGLIFGMMAVAPSKALRIISSIFVDVVRGVPLMIVAAFIFWGIPNLIESMTGHQ 591

Query: 244 LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                              SP  +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 592 -------------------SPINDFLAATIALSLNGGAYIAEIVRGGIEAVPLGQMEASR 632

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+ ++   R V+LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 633 SLGIPYKITMRKVILPQAIKVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 692

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRL 388
           Q+  +  I   IYL   IMI  F+ RL
Sbjct: 693 QSFRMYAILAIIYL---IMIT-FLTRL 715


>gi|227431442|ref|ZP_03913491.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352808|gb|EEJ42985.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 213

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 76/122 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS YT+AFIAE VR+G+++V  GQME A A GL+  ++ R ++LPQA +  +P L +Q
Sbjct: 88  IALSLYTSAFIAETVRAGILSVDNGQMEGARANGLSFNQSMRYIVLPQAFKIALPSLGNQ 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+KNSS+   VG  DL+  G  +   T       +I    YL +++ ++ +M  L  
Sbjct: 148 FINLVKNSSILAFVGGLDLMYQGNMVAAATFDTFSTYIIVALFYLVITLPLSYYMQNLER 207

Query: 391 KI 392
           K+
Sbjct: 208 KL 209



 Score = 39.7 bits (91), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T   +   +I + I+GT     ++        I  VYV+VFRNIP L++ FF +
Sbjct: 12  LQGFGYTLLSSIIALIISMILGTFFAILQILPQNWAQKIGNVYVQVFRNIPLLIITFFFF 71

Query: 150 KSVLSVLPI 158
             V  V+P+
Sbjct: 72  LVVAKVIPM 80


>gi|320174701|gb|EFW49833.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella dysenteriae CDC 74-1112]
          Length = 204

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 76  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 135

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 136 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 195

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 196 VSYLKRRTA 204



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 10/70 (14%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD--- 160
           GT++   RLS+   VAW  + YV VFR+IP ++V+ + Y       ++VL + P  D   
Sbjct: 18  GTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRL 77

Query: 161 HSIVLPFGMF 170
            S ++ F MF
Sbjct: 78  ISAMVAFSMF 87


>gi|291616686|ref|YP_003519428.1| GltK [Pantoea ananatis LMG 20103]
 gi|291151716|gb|ADD76300.1| GltK [Pantoea ananatis LMG 20103]
 gi|327393112|dbj|BAK10534.1| glutamate/aspartate transport system permease protein GltK [Pantoea
           ananatis AJ13355]
          Length = 225

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           +SP+     +S  +A S + AA+ +EI+R+G+I++ RGQ  AA+ALG+T  ++ RLV+LP
Sbjct: 89  ISPKTDIRLISAMVAFSLFEAAYYSEIIRAGIISIARGQSSAALALGMTQWQSMRLVILP 148

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R+++P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +
Sbjct: 149 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGLVYFVI 208

Query: 378 SIMIALFMNRLNAK 391
           S+  +L ++ L  K
Sbjct: 209 SLSASLLVSYLKRK 222



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149
           G + TF +  + ++   + GTL+   RLS  K V+W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GLMITFKITLTAVVFGILWGTLLAVMRLSTFKPVSWFAKLYVNLFRSVPLVMVLLWFYLV 78

Query: 150 -----KSVLSVLPIPD 160
                + VL + P  D
Sbjct: 79  VPSFLQQVLGISPKTD 94


>gi|282932631|ref|ZP_06338047.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 208-1]
 gi|281303263|gb|EFA95449.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 208-1]
          Length = 120

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/121 (43%), Positives = 77/121 (63%), Gaps = 2/121 (1%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S YT+AFIAE +R+G+ +V  GQME A + G+T+ +A R V+LPQA +  IP L +Q++N
Sbjct: 1   SLYTSAFIAECIRAGINSVGDGQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQFIN 60

Query: 334 LLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+KNSS LA   GF DL+  G  I   + Q +   L+    YL L++ ++ +M  L  KI
Sbjct: 61  LIKNSSVLAFVAGF-DLMYQGDVIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLEKKI 119

Query: 393 A 393
           A
Sbjct: 120 A 120


>gi|258404608|ref|YP_003197350.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257796835|gb|ACV67772.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 269

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 79/129 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F S  +ALS +  A+ +EI R+G++++ RGQ EAA  LGL++    R ++LPQA+R II
Sbjct: 137 RFFSAVLALSLFEGAYASEIFRAGIVSIHRGQWEAAYCLGLSNWDMYRKIILPQALRRII 196

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTSQ ++L+K+S+L   +   DL   G  ++ +T  A E+      +YL L+I ++  
Sbjct: 197 PPLTSQAVSLVKDSALVSTIAVYDLTMRGQALVAETFLAFEVWFTVAGLYLVLTITLSAL 256

Query: 385 MNRLNAKIA 393
              L  K+A
Sbjct: 257 AWGLERKMA 265


>gi|16119635|ref|NP_396341.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15162205|gb|AAK90782.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 284

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 117/220 (53%), Gaps = 10/220 (4%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   V   ++G ++++ AT           KA+ + ++  F   G+P +V I  
Sbjct: 68  LTLELTAGAMVAGIIIGCLVAVMATS-----QNIVLKAIAVAFVWWFR--GVPLIVQIFF 120

Query: 241 KYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +    P +G   ++      V+P F   ++AL  + AA ++EI+RSGL AV RGQ E
Sbjct: 121 WFNIALFVPEIGFGSWSVSVNDIVTPAFAG-FLALGLHEAANMSEIIRSGLTAVDRGQRE 179

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LGL   +  R V+LPQA+R I+PP  +Q + +LK S++   +G  DL++    I  
Sbjct: 180 AASSLGLRPLQTLRTVVLPQAIRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYA 239

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    IE++ +    YL ++ + ++  + L  K+A K + 
Sbjct: 240 RNFLVIELLCVASLWYLGITTIASIGQHYLERKLAPKGRS 279


>gi|15800368|ref|NP_286380.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 EDL933]
 gi|15829947|ref|NP_308720.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. Sakai]
 gi|168752224|ref|ZP_02777246.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758297|ref|ZP_02783304.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764669|ref|ZP_02789676.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767101|ref|ZP_02792108.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4486]
 gi|168777605|ref|ZP_02802612.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779145|ref|ZP_02804152.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4076]
 gi|168786504|ref|ZP_02811511.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC869]
 gi|168802436|ref|ZP_02827443.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC508]
 gi|195939392|ref|ZP_03084774.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809108|ref|ZP_03251445.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4206]
 gi|208815017|ref|ZP_03256196.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822912|ref|ZP_03263230.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397185|ref|YP_002269289.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4115]
 gi|217326418|ref|ZP_03442502.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. TW14588]
 gi|254791818|ref|YP_003076655.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli O157:H7 str. TW14359]
 gi|261224123|ref|ZP_05938404.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257817|ref|ZP_05950350.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291281604|ref|YP_003498422.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O55:H7 str. CB9615]
 gi|12513561|gb|AAG54988.1|AE005244_6 glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. EDL933]
 gi|13360151|dbj|BAB34116.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. Sakai]
 gi|187767198|gb|EDU31042.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013879|gb|EDU52001.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002687|gb|EDU71673.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354852|gb|EDU73271.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363462|gb|EDU81881.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365367|gb|EDU83783.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373635|gb|EDU92051.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC869]
 gi|189375565|gb|EDU93981.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC508]
 gi|208728909|gb|EDZ78510.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4206]
 gi|208731665|gb|EDZ80353.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4045]
 gi|208737105|gb|EDZ84789.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4042]
 gi|209158585|gb|ACI36018.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4115]
 gi|209776918|gb|ACI86771.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776920|gb|ACI86772.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776922|gb|ACI86773.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776924|gb|ACI86774.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776926|gb|ACI86775.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|217322639|gb|EEC31063.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. TW14588]
 gi|254591218|gb|ACT70579.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290761477|gb|ADD55438.1| Glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O55:H7 str. CB9615]
 gi|320193060|gb|EFW67700.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. EC1212]
 gi|320638105|gb|EFX07869.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O157:H7 str. G5101]
 gi|320643509|gb|EFX12679.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O157:H- str. 493-89]
 gi|320648844|gb|EFX17471.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O157:H- str. H 2687]
 gi|320654428|gb|EFX22475.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320660110|gb|EFX27640.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664908|gb|EFX32043.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326341404|gb|EGD65196.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. 1044]
 gi|326345816|gb|EGD69555.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. 1125]
          Length = 246

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +    +++ +  A E        Y+ ++  I L M
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQASKLLDYSAHAWESFTAITLAYVFINAFIMLVM 230

Query: 386 NRLNAKIAL 394
             +  K+ L
Sbjct: 231 TLVERKVRL 239



 Score = 40.4 bits (93), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|328554363|gb|AEB24855.1| GlnM [Bacillus amyloliquefaciens TA208]
 gi|328912767|gb|AEB64363.1| putative glutamine transport system permease protein [Bacillus
           amyloliquefaciens LL3]
          Length = 216

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 80/123 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ YT+AFIAE +R+G+  V +GQMEAA + G T+ +A R V+LPQA++ +IPPL +Q
Sbjct: 91  IALTIYTSAFIAEAIRAGIQTVSKGQMEAARSSGFTYSQAMRYVILPQAVKIVIPPLGNQ 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +LNL+KNSS+   V   DL+     + + T    ++ +     YL L+I +++ ++ L  
Sbjct: 151 FLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDVYIFVALFYLMLTIPLSIGVHYLER 210

Query: 391 KIA 393
           ++ 
Sbjct: 211 RLG 213



 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF++T   +F  +  +  +G L+   R++A K + WI   YVE  RNIP L++ F  Y
Sbjct: 16  GFLHTLLASFIALAGSFALGVLIAVMRITAFKPIQWIGTAYVEFIRNIPLLLITFVFY 73


>gi|307704348|ref|ZP_07641265.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|307622108|gb|EFO01128.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 225

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y SL   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221



 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A  +G L GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMFLGILFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH I++P
Sbjct: 80  ----LPLISDHIIMIP 91


>gi|307708312|ref|ZP_07644779.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus mitis NCTC 12261]
 gi|307615758|gb|EFN94964.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus mitis NCTC 12261]
          Length = 225

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y SL   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221



 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH I++P
Sbjct: 80  ----LPLISDHIIMIP 91


>gi|207724231|ref|YP_002254628.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206589447|emb|CAQ36408.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 262

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 84/134 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +LGL+       V+ PQA +  +
Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL + ++ LLK+SSLA A+G  +L +VG  +   T Q +  ++    IYL+L+ ++  F
Sbjct: 188 PPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLALTTVLTQF 247

Query: 385 MNRLNAKIALKEKK 398
            N +  ++ ++ ++
Sbjct: 248 SNAVEQRMDVEGRQ 261


>gi|294338805|emb|CAZ87139.1| Glutamate/aspartate transport system permease protein gltK
           [Thiomonas sp. 3As]
          Length = 228

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 130/234 (55%), Gaps = 22/234 (9%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           VLPF +    +GL++ T+ +   A I     +LGI+L+L   RLS   H K    L   Y
Sbjct: 12  VLPFLL----KGLTY-TIQLTVVAAIG--GTLLGILLAL--ARLS---HLKWLSLLAAGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAF 280
           I+  L+  +P L++I   +  +F  PV+ Q   I GS   P+     S Y     + AA+
Sbjct: 60  IN--LMRSIPLLLVI---FWFYFLVPVMLQS--ITGSDYPPKIGAERSAYFTFILFEAAY 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEIVR+G+ ++P+GQ+ AA ALGLT+ +  RL++LPQA+R+++P L +Q + L ++ SL
Sbjct: 113 FAEIVRAGIQSIPKGQLGAAYALGLTYAQTMRLIILPQALRNMLPVLLTQTIVLFQDVSL 172

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +   D V     I  +  + +E+  +   +Y  LS +++  + RL+ +IA+
Sbjct: 173 VALLNVTDFVGAAMKIAQRDSRVVEMYTLVAVVYFVLSFLLSQGVKRLHQRIAI 226



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L     I  T++G L+   RLS  K ++ +   Y+ + R+IP L+VIF+ 
Sbjct: 16  LLKGLTYTIQLTVVAAIGGTLLGILLALARLSHLKWLSLLAAGYINLMRSIPLLLVIFWF 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|306833970|ref|ZP_07467094.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304423971|gb|EFM27113.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 234

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 31/168 (18%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +FVLG++    ++  SR       KA+  +Y+  F                   + P+
Sbjct: 42  ILAFVLGVIFGAMSSSKSRVL-----KAISRVYVEVFQ------------------NTPL 78

Query: 251 LGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           L QF F+         G  +   F +  + +  Y  A+IAE++RSG+ AVP+GQ EAA++
Sbjct: 79  LVQFVFVYYGLAIMTNGVIMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALS 138

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            G T+ +   L++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 139 QGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T  ++   +I A ++G + GA   S ++++  I RVYVEVF+N P LV   F+Y
Sbjct: 29  GFLYTLGMSICALILAFVLGVIFGAMSSSKSRVLKAISRVYVEVFQNTPLLVQFVFVY 86


>gi|78065232|ref|YP_368001.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77965977|gb|ABB07357.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia sp. 383]
          Length = 246

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIICLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMSFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I  +YV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTLYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 78  LIVQFFVWYLVIPELLP 94


>gi|325274872|ref|ZP_08140885.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324099989|gb|EGB97822.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 320

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 15/208 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S  LG+V+ LFA  L R     T + L  +Y+   L+ G P LV I + Y   F  
Sbjct: 128 ISVVSGALGLVIGLFAG-LCRLSTNPTLRDLSTVYVE--LVRGTPLLVQIFIFY--FFIG 182

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            VL          +S EF  +  AL+ +T A++AEIVR+G+ ++ +GQ EAA +LGL   
Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAG 232

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI  
Sbjct: 233 QSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWF 292

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +YL +++ ++   +RL  ++A  +
Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLAQSD 320



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 27/58 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T W++        +IG   G  RLS N  +  +  VYVE+ R  P LV IF  Y
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSTNPTLRDLSTVYVELVRGTPLLVQIFIFY 178


>gi|294789394|ref|ZP_06754631.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Simonsiella muelleri ATCC 29453]
 gi|294482607|gb|EFG30297.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Simonsiella muelleri ATCC 29453]
          Length = 260

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/120 (39%), Positives = 77/120 (64%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+    A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R ++LPQA+R ++PP+ +++
Sbjct: 134 ALTVNAGAYITEIFRAGIQSIDKGQMEAARSLGLTYAQAMRFIILPQALRRMLPPIANEF 193

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + LLK+SSLA A+  A+L  V  TI  +     E +     IYL +++ ++    RL  K
Sbjct: 194 ITLLKDSSLASAIAVAELAYVQKTISGRYSIYEEPLYTIALIYLIMTMCLSWIFTRLEKK 253


>gi|240140777|ref|YP_002965257.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens AM1]
 gi|240010754|gb|ACS41980.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens AM1]
          Length = 240

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 12/211 (5%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +  +F LG V+ +      R    +T  A+   Y+  F    +P LV + L Y   F  P
Sbjct: 40  WAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGFR--NVPLLVQMFLWY---FVLP 89

Query: 250 VLGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            L            P+  F +  + L  +TAA +AE VR+G+ A+PRGQ +A +ALGLT 
Sbjct: 90  ELLPARLSSAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRALPRGQAQAGLALGLTW 149

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +   ++   + Q  E  
Sbjct: 150 AQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAF 209

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y++L++++      L  ++A+   +
Sbjct: 210 TAATLLYVALNLVVIAGATLLERRVAVPGGR 240



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +YA  +L G   T   A      A  +G++VG  R   ++    I   YVE FRN+P L
Sbjct: 19  GTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPLL 78

Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174
           V +F  Y  +  +LP         +PD   ++ VL  G F   R
Sbjct: 79  VQMFLWYFVLPELLPARLSSAVKQMPDAPFYTAVLCLGFFTAAR 122


>gi|147669042|ref|YP_001213860.1| polar amino acid ABC transporter, inner membrane subunit
           [Dehalococcoides sp. BAV1]
 gi|146269990|gb|ABQ16982.1| amino acid ABC transporter membrane protein, PAAT family
           [Dehalococcoides sp. BAV1]
          Length = 273

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 94/156 (60%), Gaps = 10/156 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F+ +  + +PLL    +  F  P ++   +   L+F  P+L   N+      +P  M+++
Sbjct: 98  FYVEIVRGIPLLVQLIWWYFAFPVIIQ-TIGQALNFG-PML---NY----QANPIVMAIW 148

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
               CY  A+++EI R+G+ ++P+GQMEAA +LG++H +A R ++LPQA+R I+PP+ ++
Sbjct: 149 GMTFCY-GAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFIILPQALRVILPPMGNE 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +++LLK++SL   V  AD+V +G          IE+
Sbjct: 208 FISLLKDTSLVSTVAVADMVRLGREFTATNFNPIEV 243


>gi|300693430|ref|YP_003749403.1| amino acid transmembrane ABC transporter protein [Ralstonia
           solanacearum PSI07]
 gi|299075467|emb|CBJ34761.1| putative amino acid transmembrane ABC transporter protein
           [Ralstonia solanacearum PSI07]
          Length = 262

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 84/134 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +LGL+       V+ PQA +  +
Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSLGLSRWHTFADVIFPQAFKVAL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL + +++LLK+SSLA A+G  +L +VG  +   T Q +  ++    IYL L+ ++  F
Sbjct: 188 PPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQPLPALVTTAVIYLVLTTVLTQF 247

Query: 385 MNRLNAKIALKEKK 398
            N +  ++ ++ ++
Sbjct: 248 SNAVEQRMDVEGRR 261


>gi|170703106|ref|ZP_02893925.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170131985|gb|EDT00494.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 246

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFVWYLVVPELLP 94


>gi|253987651|ref|YP_003039007.1| amino acid ABC transporter permease [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779101|emb|CAQ82261.1| similar to amino acid permease component of abc transporter
           [Photorhabdus asymbiotica]
          Length = 245

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 81/130 (62%), Gaps = 1/130 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ Y+A F+AE +R+G+  + RGQ  AA ALGLT  +A R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTLYSAPFVAEELRAGIQGIGRGQKYAAHALGLTGWQAMRYVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL-SLSIMIAL 383
           PPL  QY+N++KNSSL +A+G A+L      +  +T +  E   +   +Y+ ++++M   
Sbjct: 173 PPLLGQYMNIVKNSSLTMAIGVAELSYASRQVETETLKTFEAFGVATVLYIATIAVMEGW 232

Query: 384 FMNRLNAKIA 393
              R    IA
Sbjct: 233 GQWRQQQAIA 242



 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  GF+ T W++F  ++ +T++G L+ A R S  K++ W    Y  +FRN P LV
Sbjct: 14  QYLEWLWQGFLITLWISFCTVVASTLLGFLLAAARDSQLKILRWPVTAYTTLFRNTPLLV 73

Query: 144 VIFFLYKSVLSVLP 157
            +FF Y +   +LP
Sbjct: 74  QLFFWYFASGQILP 87


>gi|206561694|ref|YP_002232459.1| glutamate/aspartate transport system permease [Burkholderia
           cenocepacia J2315]
 gi|198037736|emb|CAR53680.1| glutamate/aspartate transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 246

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 78  LIVQFFVWYLVIPELLP 94


>gi|229494909|ref|ZP_04388660.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rhodococcus erythropolis SK121]
 gi|229318133|gb|EEN84003.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rhodococcus erythropolis SK121]
          Length = 482

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL  + F+ FG+P     AL +Q+                     F +  I LS  
Sbjct: 328 RGTPLLVQAFFIYFGIPA----ALHFQMS-------------------AFTAGIITLSLN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEIVR G+++V +GQMEA+ +LG+++ K+ R V++PQA+R++IP   +Q++  LK
Sbjct: 365 AGAYMAEIVRGGILSVDKGQMEASRSLGISYMKSMRKVIMPQAIRTMIPSYINQFVITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G A+L   G  II +  Q+  + LI   +Y  + + +    NRL  +I
Sbjct: 425 DTSILSVIGLAELTQTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 480



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 13/96 (13%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           A ++G + G  R+S N  V  I   YV++FR  P LV  FF+Y        IP     L 
Sbjct: 298 ALVLGAIFGLCRVSTNMFVRGIGTTYVDIFRGTPLLVQAFFIY------FGIP---AALH 348

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           F M     G+    +T+  NA  ++   V G +LS+
Sbjct: 349 FQMSAFTAGI----ITLSLNAGAYMAEIVRGGILSV 380


>gi|113866077|ref|YP_724566.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113524853|emb|CAJ91198.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 222

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 82/129 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   I L  Y+ A+++EIVR  + +V +GQMEAA ++G++  +A R V+LPQA+  +
Sbjct: 87  PAFVCGVIGLGIYSGAYVSEIVRGAIQSVDKGQMEAARSIGMSSGQAMRAVILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +  ADL+  G  II+ + +++E+ L    +YL L+    L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAIALVYLILTSAAGL 206

Query: 384 FMNRLNAKI 392
            + R   ++
Sbjct: 207 ILRRAEQRL 215


>gi|89100885|ref|ZP_01173735.1| Amino acid ABC-type transporter, permease component [Bacillus sp.
           NRRL B-14911]
 gi|89084421|gb|EAR63572.1| Amino acid ABC-type transporter, permease component [Bacillus sp.
           NRRL B-14911]
          Length = 226

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG++L+ F   L+R    K   AL   Y+  F   G P LV I   + L F  P +G
Sbjct: 35  TFALGLILAFFVA-LARLSSIKPLVALARFYVWIFR--GTPLLVQI---FILFFGLPSVG 88

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                   T+ P F +  IA +    A+ +EI+R+ ++++P+GQ EAA ++G+T  +A R
Sbjct: 89  -------ITLDP-FPAAVIAFTLNKGAYSSEIIRAAILSIPKGQWEAASSVGMTRSQAMR 140

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +++PQA+R  +PPL + +++L+K++SLA  +   ++   G  I   T + + + +   F
Sbjct: 141 RIIVPQAVRVSLPPLGNSFISLVKDTSLAATITVTEMFQKGQQIAAATYEPLWLYIEVAF 200

Query: 373 IYLSLSIMIALFMNRLNAK 391
           IYL  S +++ F N+L  +
Sbjct: 201 IYLIFSTVLSYFQNKLEDR 219


>gi|226307850|ref|YP_002767810.1| glutamine ABC transporter glutamine-binding/permease protein
           [Rhodococcus erythropolis PR4]
 gi|226186967|dbj|BAH35071.1| putative glutamine ABC transporter glutamine-binding/permease
           protein [Rhodococcus erythropolis PR4]
          Length = 482

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL  + F+ FG+P     AL +Q+                     F +  I LS  
Sbjct: 328 RGTPLLVQAFFIYFGIPA----ALHFQMS-------------------AFTAGIITLSLN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEIVR G+++V +GQMEA+ +LG+++ K+ R V++PQA+R++IP   +Q++  LK
Sbjct: 365 AGAYMAEIVRGGILSVDKGQMEASRSLGISYMKSMRKVIMPQAIRTMIPSYINQFVITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G A+L   G  II +  Q+  + LI   +Y  + + +    NRL  +I
Sbjct: 425 DTSILSVIGLAELTQTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 480



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 13/96 (13%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           A ++G + G  R+S N  V  I   YV++FR  P LV  FF+Y        IP     L 
Sbjct: 298 ALVLGAIFGLCRVSTNMFVRGIGTTYVDIFRGTPLLVQAFFIY------FGIP---AALH 348

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           F M     G+    +T+  NA  ++   V G +LS+
Sbjct: 349 FQMSAFTAGI----ITLSLNAGAYMAEIVRGGILSV 380


>gi|172059652|ref|YP_001807304.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171992169|gb|ACB63088.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 246

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFIWYLVVPELLP 94


>gi|17545201|ref|NP_518603.1| glutamate/aspartate transmembrane ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17427492|emb|CAD14010.1| probable glutamate/aspartate transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 242

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP A R I+P
Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M
Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIM 226

Query: 386 NRLNAKIAL 394
             + A+  L
Sbjct: 227 RWVEARTRL 235



 Score = 43.9 bits (102), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A ++G+++G  R   +K ++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDH 161
            +V +F  Y  +  ++P  D+
Sbjct: 76  LIVQLFIWYFVMPELVPGGDY 96


>gi|257092716|ref|YP_003166357.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045240|gb|ACV34428.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 245

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 22/239 (9%)

Query: 167 FGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLY 223
           +G+FL       PT T D T      + F + I LSL A  ++       G  + +P  +
Sbjct: 7   WGIFLQ------PTATGDGTYLGWMFYGFKVTIALSLSAWFIALVLGAVVGILRTVPNKW 60

Query: 224 ISTF------LIFGLPTLVLIALKYQLHFDKPVLGQFN----FIGGSTVSPEFMSLYIAL 273
           +S F      +   +P LV + L Y   F  P L   N    F   + +  +F+S  + L
Sbjct: 61  LSGFATAYVEVFRNIPLLVQLFLWY---FVMPELLPENLGNAFKQSNPIVQQFLSSMVCL 117

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +T+A +AE VRSG+ ++P GQ  A +A+G T  +  R VLLP A+R I+PPLTS++LN
Sbjct: 118 ALFTSARVAEQVRSGINSLPPGQKNAGLAMGFTLSQTYRYVLLPMAVRLIVPPLTSEFLN 177

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + KNS++   +G  +L + G  +++ T Q  E  +     YL +++++   M  +   +
Sbjct: 178 IFKNSAVCSTIGLLELAAQGRQLVDYTAQPYESFIAVTLAYLLINVVVMFGMRWVEEHV 236



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 41/78 (52%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           T D +Y   +  GF  T  L+ S    A ++G +VG  R   NK ++     YVEVFRNI
Sbjct: 16  TGDGTYLGWMFYGFKVTIALSLSAWFIALVLGAVVGILRTVPNKWLSGFATAYVEVFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV +F  Y  +  +LP
Sbjct: 76  PLLVQLFLWYFVMPELLP 93


>gi|303246865|ref|ZP_07333142.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491882|gb|EFL51762.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 231

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 20/179 (11%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+YI   +I G+P L+++   +  +F  PVL       G T+ PE  S  IAL  +T+A+
Sbjct: 63  LIYIE--IIRGIPLLMVV---FWFYFLAPVLF------GHTL-PEAQSALIALIVFTSAY 110

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEIVR+G+ A+P+GQMEAA   GL+H +A   V+LPQA+ ++IP   +Q+++L K++SL
Sbjct: 111 IAEIVRAGVQALPKGQMEAARGTGLSHFQAMTHVILPQALFNMIPSFVNQFVSLTKDTSL 170

Query: 341 AVAVGFADLVSVGGTIINQTGQA-----IEIILIWM---FIYLSLSIMIALFMNRLNAK 391
           A  +G  +L      + N+T  A     I I L++    F    LS  +   +NR  A+
Sbjct: 171 AFIIGVNELTKAATQVNNRTLTAPTEIFITIALLYFVICFCLTELSRWLEKHINRYQAR 229



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 33/67 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G   T  LA  G+  A  +G   G  R+S   L+ W   +Y+E+ R IP L
Sbjct: 16  GGYPRGPLGGLAMTVLLAVGGIFGAFWLGLGCGLLRISKKPLLRWPALIYIEIIRGIPLL 75

Query: 143 VVIFFLY 149
           +V+F+ Y
Sbjct: 76  MVVFWFY 82


>gi|254563287|ref|YP_003070382.1| glutamate and aspartate ABC transporter membrane protein
           [Methylobacterium extorquens DM4]
 gi|254270565|emb|CAX26568.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens DM4]
          Length = 240

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 12/211 (5%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +  +F LG V+ +      R    +T  A+   Y+  F    +P LV + L Y   F  P
Sbjct: 40  WAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGFR--NVPLLVQMFLWY---FVLP 89

Query: 250 VLGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            L            P+  F +  + L  +TAA +AE VR+G+ A+PRGQ +A +ALGLT 
Sbjct: 90  ELLPARLGAAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRALPRGQAQAGLALGLTW 149

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +   ++   + Q  E  
Sbjct: 150 AQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAF 209

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y++L++++      L  ++A+   +
Sbjct: 210 TAATLLYVALNLVVIAGATLLERRVAVPGGR 240



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +YA  +L G   T   A      A  +G++VG  R   ++    I   YVE FRN+P L
Sbjct: 19  GTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPLL 78

Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174
           V +F  Y  +  +LP         +PD   ++ VL  G F   R
Sbjct: 79  VQMFLWYFVLPELLPARLGAAVKQMPDAPFYTAVLCLGFFTAAR 122


>gi|153949784|ref|YP_001403106.1| polar amino acid ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|152961279|gb|ABS48740.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 245

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 68/96 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ L+ Y+ AFIAE +R+G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 113 EFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ AT++G L+ A R S  K +      Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLP 157
               LP
Sbjct: 82  ASQFLP 87


>gi|238783036|ref|ZP_04627063.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia bercovieri ATCC 43970]
 gi|238716037|gb|EEQ08022.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia bercovieri ATCC 43970]
          Length = 245

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 68/96 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ Y+ AFIAE +R+G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  GF+ T W++   ++ +T++G L+ A R S N+ + W    Y  +FRN P L+
Sbjct: 14  QYLGWLWSGFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYSTLFRNTPLLI 73

Query: 144 VIFFLYKSVLSVLP---IP----DHSIVLPFGMFLNNRGLSF 178
            +FF Y +   +LP   IP     H I L  G+ LN     F
Sbjct: 74  QLFFWYFAASQLLPASWIPWLNSSHEITL-LGLTLNWPSFEF 114


>gi|116671349|ref|YP_832282.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116611458|gb|ABK04182.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Arthrobacter sp. FB24]
          Length = 216

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 82/127 (64%), Gaps = 1/127 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS YTAAFIAE VRSG+ +VP GQ EAA ++G+   +   L++LPQA+R++IPPL + 
Sbjct: 90  IALSAYTAAFIAEAVRSGVNSVPVGQAEAARSIGMKFGQVLSLIILPQALRTVIPPLINI 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLN 389
            + L+KNSS+A A    +L   G  + N  G A+  +L+ + F YL +++ + +  + + 
Sbjct: 150 LIALVKNSSVAGAFFVLELFGYGRQLANANGDAVLAVLLGVAFFYLLITVPLGILASTVE 209

Query: 390 AKIALKE 396
            K+A+  
Sbjct: 210 RKVAIAR 216


>gi|15967001|ref|NP_387354.1| putative amino-acid transport system permease ABC transporter
           protein [Sinorhizobium meliloti 1021]
 gi|307302469|ref|ZP_07582226.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307316201|ref|ZP_07595645.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15076274|emb|CAC47827.1| Putative amino-acid transport system permease ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306898041|gb|EFN28783.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306903139|gb|EFN33729.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 273

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 38/224 (16%)

Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIAL 240
           FV + VLG+ ++L A  LS H        F+ +  + +P+L +  ++ F G P LV +A 
Sbjct: 61  FVLATVLGLGVALMA--LSEHVVLRQIARFYTEVIRGVPILVLLFYIAFVGAPALVTVA- 117

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI------------ALSCYTAAFIAEIVRSG 288
                         NF+    +S  ++  ++            AL    +AFIAE+ R+G
Sbjct: 118 --------------NFVAAPLISAGWIEPFVVRDVSLMWRAIMALMIGYSAFIAEVFRAG 163

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V +GQ+EAA ALGL+  +  RLV+ PQA+R I+PPL + ++ ++K+SSL   +G AD
Sbjct: 164 IQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVAD 223

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  +G    + + +  E   I  ++YL L+I ++L +  +  ++
Sbjct: 224 ITQMGKVYASGSFRFFETYSIVAYVYLVLTIGLSLALRAVERRL 267


>gi|22127992|ref|NP_671415.1| ABC transporter permease [Yersinia pestis KIM 10]
 gi|45443740|ref|NP_995279.1| ABC transporter permease [Yersinia pestis biovar Microtus str.
           91001]
 gi|51598240|ref|YP_072431.1| ABC amino acid transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108810145|ref|YP_654061.1| ABC transporter permease [Yersinia pestis Antiqua]
 gi|108814127|ref|YP_649894.1| ABC transporter permease [Yersinia pestis Nepal516]
 gi|145601163|ref|YP_001165239.1| ABC transporter permease [Yersinia pestis Pestoides F]
 gi|150260956|ref|ZP_01917684.1| ABC transporter permease [Yersinia pestis CA88-4125]
 gi|162421222|ref|YP_001608460.1| polar amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926152|ref|ZP_02221984.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939972|ref|ZP_02228509.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009637|ref|ZP_02230535.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213221|ref|ZP_02239256.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401564|ref|ZP_02307058.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422869|ref|ZP_02314622.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425464|ref|ZP_02317217.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468127|ref|ZP_02332831.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis FV-1]
 gi|170026442|ref|YP_001722947.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186897481|ref|YP_001874593.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218931086|ref|YP_002348961.1| ABC transporter permease [Yersinia pestis CO92]
 gi|229839818|ref|ZP_04459977.1| ABC transporter permease [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229841903|ref|ZP_04462059.1| ABC transporter permease [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229896780|ref|ZP_04511943.1| ABC transporter permease [Yersinia pestis Pestoides A]
 gi|229904668|ref|ZP_04519779.1| ABC transporter permease [Yersinia pestis Nepal516]
 gi|270488379|ref|ZP_06205453.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294505633|ref|YP_003569695.1| ABC transporter permease [Yersinia pestis Z176003]
 gi|21961138|gb|AAM87666.1|AE014013_11 putative glutamate/aspartate ABC transport system permease protein
           [Yersinia pestis KIM 10]
 gi|45438610|gb|AAS64156.1| ABC transporter permease [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591522|emb|CAH23194.1| ABC amino acid transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777775|gb|ABG20294.1| ABC transporter permease [Yersinia pestis Nepal516]
 gi|108782058|gb|ABG16116.1| ABC transporter permease [Yersinia pestis Antiqua]
 gi|115349697|emb|CAL22678.1| ABC transporter permease [Yersinia pestis CO92]
 gi|145212859|gb|ABP42266.1| ABC transporter permease [Yersinia pestis Pestoides F]
 gi|149290364|gb|EDM40441.1| ABC transporter permease [Yersinia pestis CA88-4125]
 gi|162354037|gb|ABX87985.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis Angola]
 gi|165912098|gb|EDR30738.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922012|gb|EDR39189.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991559|gb|EDR43860.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205519|gb|EDR49999.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958261|gb|EDR55282.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048946|gb|EDR60354.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055478|gb|EDR65271.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752976|gb|ACA70494.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186700507|gb|ACC91136.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229678786|gb|EEO74891.1| ABC transporter permease [Yersinia pestis Nepal516]
 gi|229691242|gb|EEO83295.1| ABC transporter permease [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696184|gb|EEO86231.1| ABC transporter permease [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700218|gb|EEO88254.1| ABC transporter permease [Yersinia pestis Pestoides A]
 gi|262363798|gb|ACY60519.1| ABC transporter permease [Yersinia pestis D106004]
 gi|262367734|gb|ACY64291.1| ABC transporter permease [Yersinia pestis D182038]
 gi|270336883|gb|EFA47660.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294356092|gb|ADE66433.1| ABC transporter permease [Yersinia pestis Z176003]
 gi|320017442|gb|ADW01014.1| ABC transporter permease [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 245

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 68/96 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ L+ Y+ AFIAE +R+G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 113 EFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSLA+A+G A+L      +  +T
Sbjct: 173 PPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETET 208



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 17/118 (14%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T W++   ++ AT++G L+ A R S  K +      Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLP---IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFAT 205
               LP   IP   +  P  + L    L++P+           F F+ G V L+L++T
Sbjct: 82  ASQFLPASWIP--WLNTPHEITLAGLTLAWPS-----------FEFLAGFVGLTLYST 126


>gi|78356431|ref|YP_387880.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218836|gb|ABB38185.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 337

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 31/200 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +    VF    G++  L   R+S +   K G    + YI   LI G P LV I L
Sbjct: 133 VTLEVSLISIVFGITFGVLTGL--ARISENPALKWGA---ITYIE--LIRGSPLLVQIFL 185

Query: 241 KYQLHFDKPVLGQFNFIGGSTVS-----------PEFMSLYIALSCYTAAFIAEIVRSGL 289
            Y             F+ G+ V+           P      +ALS +T A++AEIVR+G+
Sbjct: 186 WY-------------FVAGTLVNNLLMQAGLGQVPPMWFGVLALSVFTGAYVAEIVRAGI 232

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V RGQMEAA +LGL + +A R V+LPQA R I+PPL  Q+++L+K+SSL   +   +L
Sbjct: 233 QSVHRGQMEAARSLGLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIREL 292

Query: 350 VSVGGTIINQTGQAIEIILI 369
                 +++ + Q  E+ ++
Sbjct: 293 TKATREVVSSSLQPFELWIL 312


>gi|325525014|gb|EGD02926.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 246

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFIWYLVVPELLP 94


>gi|188583628|ref|YP_001927073.1| polar amino acid ABC transporter inner hypothetical protein
           [Methylobacterium populi BJ001]
 gi|179347126|gb|ACB82538.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium populi BJ001]
          Length = 240

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%), Gaps = 12/219 (5%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+ T    ++ +F LG V+ +      R    +   A+   Y+  F    +P LV + L 
Sbjct: 32  TVATALCSWIIAFALGSVVGVM-----RTLPSRAANAVGAAYVEGFR--NVPLLVQMFLW 84

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           Y   F  P L   +        P+  F +  + L  +TAA +AE VR+GL ++PRGQ +A
Sbjct: 85  Y---FVLPELLPRDLGTAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGLRSLPRGQAQA 141

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+ALGLT  +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +    +   
Sbjct: 142 ALALGLTRAQTYRHVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARAMQEF 201

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + Q  E       +Y++L++++      L  ++A+   +
Sbjct: 202 SFQVFEAFTAATLLYVALNLVVIAGATLLERRVAVPGGR 240



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 12/104 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +YA  +L G   T   A    I A  +G++VG  R   ++    +   YVE FRN+P L
Sbjct: 19  GTYADMLLSGLAWTVATALCSWIIAFALGSVVGVMRTLPSRAANAVGAAYVEGFRNVPLL 78

Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174
           V +F  Y  +  +LP         +PD   ++ VL  G F   R
Sbjct: 79  VQMFLWYFVLPELLPRDLGTAVKQMPDAPFYTAVLCLGFFTAAR 122


>gi|107021747|ref|YP_620074.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116688693|ref|YP_834316.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170731990|ref|YP_001763937.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|254246321|ref|ZP_04939642.1| ABC-type arginine transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|105891936|gb|ABF75101.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia cenocepacia
           AU 1054]
 gi|116646782|gb|ABK07423.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Burkholderia cenocepacia
           HI2424]
 gi|124871097|gb|EAY62813.1| ABC-type arginine transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|169815232|gb|ACA89815.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 246

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 42.7 bits (99), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK +A I  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 78  LIVQFFVWYLVIPELLP 94


>gi|301066996|ref|YP_003789019.1| amino acid ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|300439403|gb|ADK19169.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei str. Zhang]
          Length = 214

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  YT+AFIAE VR+G+ AVP GQME A ++G+T+ +A   ++ PQA + +IPPL +Q
Sbjct: 90  IGLLIYTSAFIAETVRAGIEAVPGGQMEGARSIGMTYNQAMIQIIFPQAFKMVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I   T    +  LI    YL L++ ++  M  L 
Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGKLIAATTFSTFDTYLIVGIFYLVLTMPLSYLMRYLE 208

Query: 390 AK 391
            K
Sbjct: 209 KK 210


>gi|284992300|ref|YP_003410854.1| polar amino acid ABC transporter inner membrane subunit
           [Geodermatophilus obscurus DSM 43160]
 gi|284065545|gb|ADB76483.1| polar amino acid ABC transporter, inner membrane subunit
           [Geodermatophilus obscurus DSM 43160]
          Length = 215

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 105/185 (56%), Gaps = 25/185 (13%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F+ +T +  PL  +  F+IFGLP         Q+ F   V+G   F  G+ +S       
Sbjct: 53  FYVETFRNTPLTVVFFFIIFGLP---------QIDF---VIG---FFPGAVLS------- 90

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             +  YTAAF+ E VRSG+ AV  GQ EAA ALGLT  +A R V+LPQA R+++PPL + 
Sbjct: 91  --VGLYTAAFVCEAVRSGVNAVSGGQAEAARALGLTFGQALREVVLPQAFRTVVPPLGNV 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + ++KN+S+A     +DL S+   ++N   G    +++  +  Y+ +++  AL +N++ 
Sbjct: 149 LIAMVKNTSIAAGFSVSDLSSLLPRLVNADAGDLTLVLVGVVVGYMVITLPSALAVNQIE 208

Query: 390 AKIAL 394
            ++A+
Sbjct: 209 RRVAI 213


>gi|104784121|ref|YP_610619.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95113108|emb|CAK17836.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 229

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 106/191 (55%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I L +   R SRH++ +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLILAIPLGI--ARSSRHWYVR---ALPYGYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  L A+PRG
Sbjct: 71  LVYY------GLAQFDLVRDSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQAIPRG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|299067959|emb|CBJ39173.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CMR15]
          Length = 242

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 76/117 (64%), Gaps = 2/117 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP A R I+P
Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWMFIYLSLSIM 380
           PLTS++LN+ KNS++A  +G  +L + G  +++ T Q  E  I +  M++ ++L++M
Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVM 223



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A ++G+++G  R   +K ++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKITIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDH 161
            +V +F  Y  +  ++P  D+
Sbjct: 76  LIVQLFIWYFVMPELVPGGDY 96


>gi|320547238|ref|ZP_08041531.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448126|gb|EFW88876.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 234

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 40/189 (21%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL   G+SF  L         + +F+LG++    ++        K  +A+  +Y+  F  
Sbjct: 30  FLYTLGMSFCAL---------ILAFILGVIFGAMSSS-----KNKILRAIARVYVEVFQ- 74

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFI 281
                            + P+L QF F+         G+ +   F +  + +  Y  A+I
Sbjct: 75  -----------------NTPLLVQFVFVYYGLAIMTNGAIMISTFFTAVLCVGIYHGAYI 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++RSG+ AVP+GQ EAA++ G T+ +   L++LPQA+R+I+PPLT+Q +NL+KN+S  
Sbjct: 118 AEVIRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTV 177

Query: 342 VAVGFADLV 350
             +  AD++
Sbjct: 178 AIISGADIM 186



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 37/58 (63%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T  ++F  +I A I+G + GA   S NK++  I RVYVEVF+N P LV   F+Y
Sbjct: 29  GFLYTLGMSFCALILAFILGVIFGAMSSSKNKILRAIARVYVEVFQNTPLLVQFVFVY 86


>gi|241759295|ref|ZP_04757401.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria flavescens SK114]
 gi|241320431|gb|EER56728.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria flavescens SK114]
          Length = 248

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 76/121 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L  V  TI  +     E +     IYL L+  +     RL +
Sbjct: 182 FITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSFLGWVFLRLES 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|257126581|ref|YP_003164695.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257050520|gb|ACV39704.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 237

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 80/130 (61%), Gaps = 2/130 (1%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G  +SPE   + I +S    AF+AEI R G+ A+  GQMEAA +LGL+  KA R V+
Sbjct: 100 FLNGQQMSPEIAGV-IIISLNAGAFLAEIFRGGIQAIDTGQMEAARSLGLSFGKAMRKVI 158

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-Y 374
           LPQA++++IP + +Q++  LK++SL + +G ADL+  G        +  E +LI   I Y
Sbjct: 159 LPQAIKNMIPAILNQFITSLKDTSLLMVIGVADLMGKGQIAFKTNYKTFETMLIIALIYY 218

Query: 375 LSLSIMIALF 384
           L + I+  LF
Sbjct: 219 LVIKILSTLF 228


>gi|322373408|ref|ZP_08047944.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C150]
 gi|321278450|gb|EFX55519.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C150]
          Length = 731

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++G++  + A       R+         + +PL+ ++ F+ +G+P L+       
Sbjct: 539 FAIAMIIGVIFGMMAVAPNKTLRVISQVFVDVVRGIPLMIVAAFIYWGIPNLIE------ 592

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                      N  G  +   +F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 593 -----------NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSL 641

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ +    R V+LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 642 GVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 701

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +   +     RL  ++
Sbjct: 702 FRMYAILAILYLVIITFLTKLAKRLEKRL 730


>gi|312797282|ref|YP_004030204.1| glutamate/aspartate transport system permease protein gltK
           [Burkholderia rhizoxinica HKI 454]
 gi|312169057|emb|CBW76060.1| Glutamate/aspartate transport system permease protein gltK
           [Burkholderia rhizoxinica HKI 454]
          Length = 226

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 84/136 (61%), Gaps = 4/136 (2%)

Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           VSP+     +S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+T+ +  RL++LP
Sbjct: 90  VSPDVDIRLVSAMVAFSLFEAAYYSEIIRAGIQAVPRGQLSAASALGMTYGQGMRLIVLP 149

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R+++P L +Q + L +++SL   +  AD       + ++ G  +E++L    +Y  +
Sbjct: 150 QALRAMVPLLLTQAIVLFQDTSLVYVISVADFFQTAANVGDRDGTIVEMVLFAGAVYFVV 209

Query: 378 SIMIALFMNRLNAKIA 393
            ++ +  +  L  K+A
Sbjct: 210 CVVASSLVKGLQKKVA 225


>gi|307329226|ref|ZP_07608391.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306885125|gb|EFN16146.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 215

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 80/126 (63%), Gaps = 2/126 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL CYT++F+ E VRSG+ AVP GQ EAA +LG+T  +  RL++ PQA RS+IPP++S +
Sbjct: 91  ALGCYTSSFVCEAVRSGINAVPLGQAEAARSLGMTFFQTLRLIVFPQATRSVIPPMSSIF 150

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLNA 390
           + L KNS++A A    +L +V   +++  G AI  I +W+   YL ++  I+     L +
Sbjct: 151 IALTKNSAIAGAFSNTELFNV-SKLLSDKGFAIGWIFLWIALCYLVITFAISGLFRLLES 209

Query: 391 KIALKE 396
           ++ +  
Sbjct: 210 RLEVAR 215


>gi|319791542|ref|YP_004153182.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315594005|gb|ADU35071.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 243

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ + +AL  +T+A IAE VRSG+ A+P+GQ  A +A+G T  +  R V+LP A R I
Sbjct: 99  PSFILVVLALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTTQYYRYVILPMAYRII 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV   +L         +T + IE+ L     Y    ++ AL
Sbjct: 159 IPPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYLAVTACY----VVSAL 214

Query: 384 FMNRLNAKIALKEK 397
            +NRL A I  K +
Sbjct: 215 AINRLMAFIEKKTR 228


>gi|322377819|ref|ZP_08052308.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321281242|gb|EFX58253.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 225

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 113/233 (48%), Gaps = 40/233 (17%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI+    +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGILFGAMSTSKRPILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
              PLL     + +GLP +           D  ++            P + +  + +  Y
Sbjct: 68  ---PLLVQFVIVFYGLPLIS----------DHIIM-----------IPIYWTAVLCVGLY 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+K
Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           N+S    +   DL+ V  +     G  I   L    +Y SL   +A F  ++ 
Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKIE 216



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G L GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGILFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH I++P
Sbjct: 80  ----LPLISDHIIMIP 91


>gi|228477049|ref|ZP_04061687.1| glutamine ABC transporter permease protein [Streptococcus
           salivarius SK126]
 gi|228251068|gb|EEK10239.1| glutamine ABC transporter permease protein [Streptococcus
           salivarius SK126]
          Length = 732

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 23/209 (11%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++G++  + A       R+         + +PL+ ++ F+ +G+P L+       
Sbjct: 540 FAIAMIIGVIFGMMAVAPNKTLRVISQVFVDVVRGIPLMIVAAFIYWGIPNLIE------ 593

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                      N  G  +   +F++  IALS    A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 594 -----------NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEAVPIGQMEASRSL 642

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ +    R V+LPQA+R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+
Sbjct: 643 GVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQS 702

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  I   +YL +   +     RL  ++
Sbjct: 703 FRMYAILAILYLVIITCLTKLAKRLEKRL 731


>gi|50123385|ref|YP_052552.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium atrosepticum SCRI1043]
 gi|49613911|emb|CAG77364.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium atrosepticum SCRI1043]
          Length = 247

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 40/217 (18%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
           +S+ S L  P + I L  G FL   G+S  T+ + T         VLG +L+  A R S+
Sbjct: 6   QSLESWLLAPQYLIWLWHG-FLITLGISLGTVVLST---------VLGFLLA--AARDSQ 53

Query: 210 HFHEKTG---------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN----- 255
             H   G         +  PLL    F  FG   L          F   V+   N     
Sbjct: 54  -IHVLRGVVVAYSSLFRNTPLLVQLFFWYFGAGQL----------FSSEVMQWLNTPHSI 102

Query: 256 -FIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              G +   P  EF++    L+ Y++AFIAE +RSG+  V RGQ  AA ALGLT  ++ R
Sbjct: 103 SLWGATLAWPSFEFLAGLAGLTLYSSAFIAEEIRSGIRGVARGQKYAAQALGLTGWQSMR 162

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            V+LPQA++  +PPL  QY+N++KNSSL +A+G A+L
Sbjct: 163 YVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGVAEL 199


>gi|300705160|ref|YP_003746763.1| glutamate/aspartate ABC transporter membrane component [Ralstonia
           solanacearum CFBP2957]
 gi|299072824|emb|CBJ44180.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CFBP2957]
          Length = 242

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  R ++LP A R I+P
Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHIMLPMAFRIIVP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M
Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIM 226

Query: 386 NRLNAKIAL 394
             + A+  L
Sbjct: 227 RWVEARTRL 235



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 45/81 (55%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A ++G+++G  R   NK+++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPNKVLSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDH 161
            +V +F  Y  +  ++P  D+
Sbjct: 76  LIVQLFIWYFVMPELVPGGDY 96


>gi|152987811|ref|YP_001349399.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150962969|gb|ABR84994.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 222

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LG VL+L     S+      G      +++PLL + T+  F +P +    L++    D P
Sbjct: 35  LGTVLALMRLSSSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFI----LRWITGEDTP 90

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V               F S  +A   + AA+  EIVR+G+ A+P+GQM AA ALG+T+ +
Sbjct: 91  V-------------GAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQ 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA R + P L  Q + L +++SL   VG  D ++   +  +  GQA E ++ 
Sbjct: 138 TMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIF 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              +Y  +S   +  + RL  ++
Sbjct: 198 AGLVYFVVSFTASFAVKRLQKRL 220



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L   G++    +GT++   RLS++KL++ I   YV  FR+IP L+VI + Y +
Sbjct: 17  GMLMTLKLMVLGVLGGVALGTVLALMRLSSSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 76

Query: 152 V 152
           V
Sbjct: 77  V 77


>gi|322516335|ref|ZP_08069261.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322125173|gb|EFX96562.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 732

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+                  N  G  +   +F++  IALS  
Sbjct: 573 RGIPLMIVAAFIYWGIPNLIE-----------------NITGHQSPINDFVAATIALSLN 615

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG+ +    R V+LPQA+R ++P   +Q++  LK
Sbjct: 616 GGAYIAEIVRGGIEAVPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLK 675

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +   +     RL  ++
Sbjct: 676 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAILYLVIITCLTKLAKRLEKRL 731


>gi|183598117|ref|ZP_02959610.1| hypothetical protein PROSTU_01482 [Providencia stuartii ATCC 25827]
 gi|188020276|gb|EDU58316.1| hypothetical protein PROSTU_01482 [Providencia stuartii ATCC 25827]
          Length = 226

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 12/209 (5%)

Query: 186 NAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            AKI + + V+GI+    L   RLS     K       LY++TF    +P LV++ L + 
Sbjct: 24  TAKITITAIVVGILWGTVLAVMRLSTF---KPISWFAALYVNTFR--SIP-LVMVLLWFY 77

Query: 244 LHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           L    P L Q N +G S  S    +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+A
Sbjct: 78  LIV--PNLVQ-NVLGISPKSDIRLISAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALA 134

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+TH +  RLV+LPQA +++IP L +Q + L ++SSL   +   D       I  + G 
Sbjct: 135 LGMTHMQTMRLVILPQAFKAMIPLLLTQGIVLFQDSSLVYVLSLTDFFRTATNIGERDGT 194

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +E+IL   F+Y  +S   ++ +N L  +
Sbjct: 195 QVEMILFAGFVYFIISFGASMLVNYLKKR 223



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 7/79 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS  K ++W   +YV  FR+IP ++V+ + 
Sbjct: 17  LLDGLVVTAKITITAIVVGILWGTVLAVMRLSTFKPISWFAALYVNTFRSIPLVMVLLWF 76

Query: 149 Y-------KSVLSVLPIPD 160
           Y       ++VL + P  D
Sbjct: 77  YLIVPNLVQNVLGISPKSD 95


>gi|23008921|ref|ZP_00050163.1| COG0765: ABC-type amino acid transport system, permease component
           [Magnetospirillum magnetotacticum MS-1]
          Length = 209

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 100/175 (57%), Gaps = 8/175 (4%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAA 279
           LY+   L+  LP +++I   +  +F  P LG +     S   V P F S  I  + + AA
Sbjct: 39  LYVE--LMRALPLVLVI---FWFYFLMPYLGAWATGAASPIQVGP-FASALITFTLFEAA 92

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R+G+ +VP+GQ  AA ALG+++ +  RLV+LPQA R+++P L +Q + L +++S
Sbjct: 93  YFAEIMRAGIQSVPKGQSAAARALGMSYAQTMRLVVLPQAFRNMLPLLLTQTIVLFQDTS 152

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L   +   D +     +  + G+ +E+ L    +Y ++    +L + RL A+IA+
Sbjct: 153 LVYVLSLTDFLGAASKVAQRDGRLVEMYLFAALVYFAVCFAASLLVRRLQARIAV 207


>gi|152965464|ref|YP_001361248.1| polar amino acid ABC transporter inner membrane protein
           [Kineococcus radiotolerans SRS30216]
 gi|151359981|gb|ABS02984.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
          Length = 224

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 90/183 (49%), Gaps = 24/183 (13%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           S VLG VL++F      A R     +    +  PL  I  F +  LPTL       Q+ F
Sbjct: 29  SLVLGTVLAVFRISPSAALRAFGTTYVNVFRNTPLTLIMVFCVLCLPTL-------QITF 81

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                 Q+                +AL  YT+ F+ E VRSG+  VP GQ EAA A+GL 
Sbjct: 82  SDDTARQYRAYA-----------ILALVAYTSCFVCEAVRSGINTVPLGQAEAARAIGLP 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                RLV+LPQA R+++PPL S    LLKN+S+A A    +LVS    ++ Q G A+  
Sbjct: 131 FTGVLRLVVLPQAFRAVVPPLGSVLNALLKNTSVASAASNYELVSAMRNLVEQNGNAVIA 190

Query: 367 ILI 369
           +LI
Sbjct: 191 VLI 193


>gi|163853361|ref|YP_001641404.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium extorquens PA1]
 gi|218532218|ref|YP_002423034.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium chloromethanicum CM4]
 gi|163664966|gb|ABY32333.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium extorquens PA1]
 gi|218524521|gb|ACK85106.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium chloromethanicum CM4]
          Length = 240

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 110/211 (52%), Gaps = 12/211 (5%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +  +F LG V+ +      R    +T  A+   Y+  F    +P LV + L Y   F  P
Sbjct: 40  WAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGFR--NVPLLVQMFLWY---FVLP 89

Query: 250 VLGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            L            P+  F +  + L  +TAA +AE VR+G+ A+PRGQ +A +ALGLT 
Sbjct: 90  ELLPARLGSAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRALPRGQAQAGLALGLTW 149

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +   ++   + Q  E  
Sbjct: 150 AQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAF 209

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y++L++++      L  ++A+   +
Sbjct: 210 TAATLLYVALNLVVIAGATLLERRVAVPGGR 240



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +YA  +L G   T   A      A  +G++VG  R   ++    I   YVE FRN+P L
Sbjct: 19  GTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPLL 78

Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174
           V +F  Y  +  +LP         +PD   ++ VL  G F   R
Sbjct: 79  VQMFLWYFVLPELLPARLGSAVKQMPDAPFYTAVLCLGFFTAAR 122


>gi|33601620|ref|NP_889180.1| glutamine transport system permease [Bordetella bronchiseptica
           RB50]
 gi|33576057|emb|CAE33136.1| glutamine transport system permease [Bordetella bronchiseptica
           RB50]
          Length = 222

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 81/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L  Y+ A+++EIVR  + +V RGQMEAA +LG++  +A R+++LPQA+  +
Sbjct: 87  PAFACGVLGLGIYSGAYVSEIVRGAIQSVDRGQMEAARSLGMSSAQAMRIIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E  L+   IYL L+     
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVVALIYLVLTTATTT 206

Query: 384 FMNRLNAKI 392
            + R+  ++
Sbjct: 207 ILRRIEHRL 215



 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIF 146
           A+L G V T  +    ++   +IG LVG GRL+  +   + +C VY+  FR  P LV +F
Sbjct: 14  ALLRGAVVTVEVTACALLLGCVIGLLVGVGRLNPQRRFIYNLCSVYLLFFRGTPLLVQLF 73

Query: 147 FLYKSVLSVLPIPDHSIVLP 166
             +        +P   I LP
Sbjct: 74  IWF------FGLPQFGITLP 87


>gi|293364950|ref|ZP_06611667.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307703201|ref|ZP_07640147.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|291316400|gb|EFE56836.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307623276|gb|EFO02267.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 225

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 43/238 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI     +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAVGS--FILAMVLGIFFGAMSTSKRPLLRVLARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
              PLL     + +GLP +           D  ++            P + +  + +  Y
Sbjct: 68  ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+K
Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           N+S    +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   L+  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAVGSFILAMVLGIFFGAMSTSKRPLLRVLARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH+I++P
Sbjct: 80  ----LPLISDHTIMIP 91


>gi|116495483|ref|YP_807217.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|191638946|ref|YP_001988112.1| Glutamine ABC transporter permease [Lactobacillus casei BL23]
 gi|227534090|ref|ZP_03964139.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239629875|ref|ZP_04672906.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|116105633|gb|ABJ70775.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|190713248|emb|CAQ67254.1| Glutamine ABC transporter permease [Lactobacillus casei BL23]
 gi|227188271|gb|EEI68338.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239527487|gb|EEQ66488.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382994|gb|AEA54470.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei LC2W]
 gi|327386182|gb|AEA57656.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei BD-II]
          Length = 214

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  YT+AFIAE VR+G+ AVP GQME A ++G+T+ +A   ++ PQA + +IPPL +Q
Sbjct: 90  IGLLIYTSAFIAETVRAGIEAVPGGQMEGARSIGMTYNQAMIQIIFPQAFKMVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I   T    +  LI    YL L++ ++  M  L 
Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGKLIAATTFSTFDTYLIVGVFYLVLTMPLSYLMRYLE 208

Query: 390 AK 391
            K
Sbjct: 209 KK 210


>gi|110804698|ref|YP_688218.1| glutamate/aspartate transport system permease [Shigella flexneri 5
           str. 8401]
 gi|110614246|gb|ABF02913.1| glutamate/aspartate transport system permease [Shigella flexneri 5
           str. 8401]
          Length = 224

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 82/129 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD +    TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFLPYRSTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 39.7 bits (91), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   V+W  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|86359544|ref|YP_471436.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
 gi|86283646|gb|ABC92709.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 272

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 82/128 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R I PPL++ 
Sbjct: 145 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 204

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++LF+ R+  
Sbjct: 205 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLFLRRIEK 264

Query: 391 KIALKEKK 398
           K+    ++
Sbjct: 265 KMKQMPRR 272


>gi|312863094|ref|ZP_07723332.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus vestibularis F0396]
 gi|311100630|gb|EFQ58835.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus vestibularis F0396]
          Length = 732

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+                  N  G  +   +F++  IALS  
Sbjct: 573 RGIPLMIVAAFIYWGIPNLIE-----------------NITGHQSPINDFVAATIALSLN 615

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG+ +    R V+LPQA+R ++P   +Q++  LK
Sbjct: 616 GGAYIAEIVRGGIEAVPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLK 675

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +   +     RL  ++
Sbjct: 676 DTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAILYLVIITCLTKLAKRLEKRL 731


>gi|238750306|ref|ZP_04611808.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia rohdei ATCC 43380]
 gi|238711539|gb|EEQ03755.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia rohdei ATCC 43380]
          Length = 203

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 88/145 (60%), Gaps = 2/145 (1%)

Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + N+ G +   P  EF++ +I L+ Y+ AFIAE +R+G+  V +GQ  AA ALGLT  ++
Sbjct: 57  EINWFGVNLSWPSFEFLAGFIGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQS 116

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA++  +PPL  QY+N++KNSSL +A+G A+L      +  +T +  +   + 
Sbjct: 117 MRYVVLPQALKIALPPLLGQYMNIIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVA 176

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
             +Y+++  +I  +      + A++
Sbjct: 177 TLLYIAIIALIEAWGMWRQQRTAIR 201


>gi|78356476|ref|YP_387925.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218881|gb|ABB38230.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 230

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 6/135 (4%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE     I    +T+A+IAEIVR+G++A+P+GQMEAA   GLT  +A R V+LPQA+R++
Sbjct: 94  PEVECALITFVVFTSAYIAEIVRAGVLALPQGQMEAARGTGLTKLQAMRFVILPQALRNM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP   +Q+++L K++SLA  +G A+L      + N+T  A       M IY ++ +M  L
Sbjct: 154 IPSFVNQFVSLTKDTSLAYVIGVAELTRAAVQVNNRTLSAP------MEIYFTILVMYFL 207

Query: 384 FMNRLNAKIALKEKK 398
               L +     EK+
Sbjct: 208 ICYALTSASRRLEKQ 222


>gi|328884996|emb|CCA58235.1| ABC-type amino acid transport system, permease component
           [Streptomyces venezuelae ATCC 10712]
          Length = 316

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 9/209 (4%)

Query: 189 IFVFSFVLGIVLSL-FAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLV--LIALKYQL 244
           I V S  LG+VL + FA  RLS++    TG A+  LYI  +   G P  V  L+     L
Sbjct: 83  ISVSSMALGLVLGIVFAVMRLSKN--PVTG-AVAWLYI--WFFRGTPVYVQLLVWFNLSL 137

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F+   LG         V   FM   + L     A++AEIVR+G+ +V  GQ EAA ALG
Sbjct: 138 IFEYINLGPIYKNETVDVMTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEAAHALG 197

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  K    V+LPQAMR I+PP  ++++N+LK SSL  AV + +L+     I +  G  +
Sbjct: 198 MSQTKTMGRVVLPQAMRVIVPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGSTAGAVM 257

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E++ +    YL+L+ + ++    L  + A
Sbjct: 258 EMLFVASIWYLALTSVFSVGQYYLERRFA 286


>gi|221231431|ref|YP_002510583.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|298229829|ref|ZP_06963510.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255469|ref|ZP_06979055.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502400|ref|YP_003724340.1| amino acid ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|220673891|emb|CAR68397.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|298237995|gb|ADI69126.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 225

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 110/234 (47%), Gaps = 35/234 (14%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP 220
           FG F N  G  F   T+      F+ + VLGI     +T      R+  H   +  +  P
Sbjct: 14  FGQFFN--GFLF---TLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTP 68

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL     + +GLP +           D  ++            P + +  + +  Y  A+
Sbjct: 69  LLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLYHGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE++RSG+ ++P GQMEAA++ G T+  A RL+ LPQA R I+PPLT+Q +NL+KN+S 
Sbjct: 108 IAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTST 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
              +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 168 VAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221


>gi|320177112|gb|EFW52128.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella dysenteriae CDC 74-1112]
 gi|320184057|gb|EFW58877.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella flexneri CDC 796-83]
 gi|323165234|gb|EFZ51024.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella sonnei 53G]
 gi|332098836|gb|EGJ03793.1| general L-amino acid transport system permease protein aapQ domain
           protein [Shigella boydii 3594-74]
          Length = 77

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 61/76 (80%), Gaps = 1/76 (1%)

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I
Sbjct: 2   IIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTI 61

Query: 382 ALFMNRLNAKIALKEK 397
           +L MN  N +IA+ E+
Sbjct: 62  SLLMNIYNRRIAIVER 77


>gi|239817009|ref|YP_002945919.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239803586|gb|ACS20653.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 231

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 15/165 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL    F  FG P L+   +K           Q+ + G      E  S  IALS Y
Sbjct: 66  RNIPLLAHMLFWYFGAPELLPEGIK-----------QWLYAGHI----EAYSAIIALSLY 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAAF+AE +RSG+ A+P  Q+EA  ALG +     R V+LPQA+R  +PPL SQ L+L K
Sbjct: 111 TAAFMAEDIRSGIRAIPTVQLEAGRALGFSFLGTMRRVVLPQALRVTVPPLISQTLSLWK 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           N+S+A  +G A+L+   G + + + ++ E        YL++S+ I
Sbjct: 171 NTSIATVIGVAELMYQAGQVESASFRSFESFAFASAAYLTVSLAI 215


>gi|145298730|ref|YP_001141571.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851502|gb|ABO89823.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 300

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/115 (43%), Positives = 76/115 (66%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AAF+AEIVR+GL AVP+GQ EAA +LGL+ R   R V+LPQAM  ++PPLT Q + L+K
Sbjct: 182 SAAFVAEIVRAGLAAVPKGQWEAAQSLGLSPRVRLRRVILPQAMLLMLPPLTGQLIALVK 241

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++++   +   +L  VG  + N +G   EI L+    YL + + + + ++RL AK
Sbjct: 242 DTAIVSLISVQELTFVGTEMANSSGLVYEIWLLVAAAYLLICLSLFVLLSRLEAK 296


>gi|160895808|ref|YP_001561390.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160361392|gb|ABX33005.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 260

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 12/171 (7%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +T +   L + + F ++   G P LV I   Y   F  PVL     I G  + P+F +  
Sbjct: 81  RTSRTAALRWAAGFYVWAIRGTPLLVQILFIY---FALPVL-----IPGLNL-PDFAAAC 131

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+    A+ AE VR+GL AVPRGQ EAA ALGL        V+ PQA +  +PPL S 
Sbjct: 132 IALALNVGAYNAEAVRAGLQAVPRGQAEAARALGLPRICVFMDVVFPQAFKISLPPLVSN 191

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++ LLK+SSLA A+G  +L +VG  I + T Q +E ++     YL L+ ++
Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGNRIQSATFQPVETLVTVGVTYLVLTTLV 242


>gi|306829073|ref|ZP_07462263.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304428159|gb|EFM31249.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 225

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 45/239 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ +  LGI+  + +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMALGIIFGVLSTSKHQILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSC 275
              PLL     + +GLP                       I   T+  P + +  + +  
Sbjct: 68  ---PLLVQFVIVFYGLP----------------------LISEHTIMIPIYWTAVLCVGL 102

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+
Sbjct: 103 YHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLI 162

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           KN+S    +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 163 KNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221


>gi|229541936|ref|ZP_04430996.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229326356|gb|EEN92031.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 235

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 117/216 (54%), Gaps = 21/216 (9%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            +T++      V SF++G +L +         + K     P++ +   +   LP +++I 
Sbjct: 20  AVTLEVAFVAIVLSFLIGCILGILR-------YAKIPILSPIVALVVEITRNLPLILIIF 72

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             Y   F  P +G    +  + +S        AL+ + +A IAEIVR GL A+P+GQ+EA
Sbjct: 73  FTY---FALPEVGMKMSVTAAAIS--------ALTVFESAMIAEIVRGGLNAIPKGQIEA 121

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + GL + +    ++LPQA++ +IPPL SQ+++LLK++SLA+ +   +L+     I N 
Sbjct: 122 ARSSGLKYIQTLWYIILPQALKKMIPPLVSQFISLLKDTSLAIIIALPELLHNAKGIYNG 181

Query: 360 TGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G +   I I+L+  F+Y  ++ ++++   RL  ++
Sbjct: 182 EGGSKYIIPILLMAAFMYFVVNYLLSILARRLEKRL 217



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  +AF  ++ + +IG ++G  R +   +++ I  + VE+ RN+P +++IFF 
Sbjct: 15  LLKGFAVTLEVAFVAIVLSFLIGCILGILRYAKIPILSPIVALVVEITRNLPLILIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|161524793|ref|YP_001579805.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189350453|ref|YP_001946081.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|160342222|gb|ABX15308.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189334475|dbj|BAG43545.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 240

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 63/85 (74%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL  Q +NL+KNSSLA+A+G A+L
Sbjct: 166 PPLFGQIMNLVKNSSLAMAIGVAEL 190


>gi|221065074|ref|ZP_03541179.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220710097|gb|EED65465.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 250

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 79/134 (58%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ +  A+  +T+A IAE VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I
Sbjct: 109 PGFVLVVFAIGFFTSARIAEQVRSGIQALPRGQRYAGMAVGFTTFQTYRYVLLPMAFRII 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV  A+L         +T + +EI L        L ++ A 
Sbjct: 169 IPPLTSEAMNVFKNSSVAFAVSVAELTMFAMQAQEETARGVEIYL----AVTGLYVISAF 224

Query: 384 FMNRLNAKIALKEK 397
            +NR+ A I  + +
Sbjct: 225 IINRIMAFIEKRSR 238



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+ Q       D +Y   ++  +  T  +A   ++ A ++G ++G  R   ++   WI R
Sbjct: 16  EVGQSCFGKNGDITYLDWMMSAWGWTVAVALLSLVIALVLGAVIGTLRTLPDR--PWIVR 73

Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +   +VE+FRNIP LV +F  Y  + +++P
Sbjct: 74  LGNAWVELFRNIPLLVQVFIWYHVIPAMVP 103


>gi|317153613|ref|YP_004121661.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943864|gb|ADU62915.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 588

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 81/133 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF +  I    +T AF+AEI+R+G+ ++P+G +EA+ + GL   +  R ++LP + R II
Sbjct: 136 EFWTATIGCGIFTGAFMAEIIRAGIQSIPKGLLEASYSSGLNFSQTLRKIILPLSFREII 195

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL S++LN +KN+SLA+ +G A+L      + + T    E + +   +Y  LS+ IA  
Sbjct: 196 PPLGSEFLNNMKNTSLAMTIGVAELCWSMQEVYSLTYHTFEAMTVATAVYSCLSLSIAGI 255

Query: 385 MNRLNAKIALKEK 397
           +N +N ++ +  K
Sbjct: 256 LNLVNIRLKILPK 268



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 1/129 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ + AA+IAE VR G+  +P GQ+EAA A GL + +  R ++LPQA++ ++P L   
Sbjct: 457 IALTFFFAAYIAETVRGGIENIPVGQVEAATASGLGYFQIMRKIILPQALKQMLPALVGM 516

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++   K++SL   +G  +L      I N+      EI      +Y   S +++ +  RL 
Sbjct: 517 FIAAFKDTSLVYIIGVTELTRAAYAINNRIMIYPFEIFTTVAMLYFVPSYLMSQYAKRLE 576

Query: 390 AKIALKEKK 398
            K++ +  K
Sbjct: 577 RKLSPENVK 585



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           +GT+ G  RLS+ K V W    YVE+FRN P L+ +FF
Sbjct: 76  LGTIFGLARLSSFKPVYWFATSYVELFRNTPLLIQLFF 113


>gi|157369455|ref|YP_001477444.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157321219|gb|ABV40316.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 224

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+I++ RGQ  AA+ALG++H ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIISISRGQSSAALALGMSHWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +  
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLAASAL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 37.0 bits (84), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 40/68 (58%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +  + ++   + GT++   RLS  K ++W   +YV +FR++P ++V+ + 
Sbjct: 16  LLQGLLITLKITVTAIVFGILWGTILAVMRLSPFKPISWFAALYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  V S+L
Sbjct: 76  YLVVPSLL 83


>gi|73748260|ref|YP_307499.1| amino acid ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|289432311|ref|YP_003462184.1| polar amino acid ABC transporter inner membrane protein
           [Dehalococcoides sp. GT]
 gi|73659976|emb|CAI82583.1| amino acid ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|288946031|gb|ADC73728.1| polar amino acid ABC transporter, inner membrane subunit
           [Dehalococcoides sp. GT]
          Length = 273

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 92/153 (60%), Gaps = 14/153 (9%)

Query: 224 ISTF---LIFGLPTLVLIALKYQLHFDKPVLGQ-------FNFIGGSTVSPEFMSLYIAL 273
           I+TF   ++ G+P LV +   Y   F  PV+ Q       F  +     +P  M+++   
Sbjct: 95  IATFYVEIVRGIPLLVQLIWWY---FAFPVIIQTIGQALNFGPMLNYQANPIVMAIWGMT 151

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
            CY  A+++EI R+G+ ++P+GQMEAA +LG++H +A R ++LPQA+R ++PP+ +++++
Sbjct: 152 FCY-GAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFIILPQALRVVLPPMGNEFIS 210

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           LLK++SL   V  AD+V +G          IE+
Sbjct: 211 LLKDTSLVSTVAVADMVRLGREFTATNFNPIEV 243


>gi|302536847|ref|ZP_07289189.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. C]
 gi|302445742|gb|EFL17558.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. C]
          Length = 315

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 3/134 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FM   + L     A++AEIVR+G+ +V  GQ EA+ ALG+T  +  R V+LPQAMR IIP
Sbjct: 159 FMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEASHALGMTQTQTMRRVVLPQAMRVIIP 218

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL-- 383
           P  ++++N+LK SSL  AV + +L+     I +  G  IE+  +    YL+L+ + ++  
Sbjct: 219 PTGNEFINMLKTSSLVSAVQYTELLRASSNIGSTAGAVIEMYFVASIWYLALTSVFSVGQ 278

Query: 384 -FMNRLNAKIALKE 396
            ++ R  A+ +L+ 
Sbjct: 279 YYLERRYARGSLRS 292


>gi|154686885|ref|YP_001422046.1| GlnM [Bacillus amyloliquefaciens FZB42]
 gi|154352736|gb|ABS74815.1| GlnM [Bacillus amyloliquefaciens FZB42]
          Length = 216

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 8/130 (6%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+ YT+AFIAE +R+G+  V +GQMEAA + G T+ +A R V+LPQA++ +IP
Sbjct: 86  FQAGTIALTIYTSAFIAEAIRAGIQTVSKGQMEAARSSGFTYSQAMRYVILPQAVKIVIP 145

Query: 326 PLTSQYLNLLKNSS-LAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           PL +Q+LNL+KNSS L V  G      ADLVS    ++      I + L ++ + + LSI
Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDV--YIFVALFYLIVTIPLSI 203

Query: 380 MIALFMNRLN 389
            +     RL 
Sbjct: 204 GVHYLERRLG 213



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF++T   +F  +  +  +G L+   R++A K + WI   YVE  RNIP L++ F  Y
Sbjct: 16  GFLHTLLASFIALAGSFALGVLIAVMRITAFKPLQWIGTAYVEFIRNIPLLLITFVFY 73


>gi|49078488|gb|AAT49790.1| PA1340 [synthetic construct]
          Length = 223

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LG VL+L     S+      G      +++PLL + T+  F +P +    L++    D P
Sbjct: 35  LGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFI----LRWITGEDTP 90

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V               F S  +A   + AA+  EIVR+G+ A+P+GQM AA ALG+T+ +
Sbjct: 91  V-------------GAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQ 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA R + P L  Q + L +++SL   VG  D ++   +  +  GQA E ++ 
Sbjct: 138 TMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIF 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              +Y  +S   +  + RL  ++
Sbjct: 198 AGLVYFVVSFTASFAVKRLQKRL 220



 Score = 36.2 bits (82), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L   G++    +GT++   RLS +KL++ I   YV  FR+IP L+VI + Y +
Sbjct: 17  GMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 76

Query: 152 V 152
           V
Sbjct: 77  V 77


>gi|308186029|ref|YP_003930160.1| glutamate/aspartate transport system permease protein gltK [Pantoea
           vagans C9-1]
 gi|308056539|gb|ADO08711.1| Glutamate/aspartate transport system permease protein gltK [Pantoea
           vagans C9-1]
          Length = 225

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+I++ RGQ  AA+ALG+T  +A RL++LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIISISRGQGNAALALGMTQWQAMRLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGLVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  K
Sbjct: 216 VSYLKRK 222



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 42/68 (61%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V TF +  + ++   + GTL+   RLS+ K V+W  ++YV +FR++P ++V+ + 
Sbjct: 16  LLNGLVITFKITITAVVFGILWGTLLAVMRLSSFKPVSWFAKIYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  V S L
Sbjct: 76  YLVVPSFL 83


>gi|300715837|ref|YP_003740640.1| Glutamate/aspartate transport system permease [Erwinia billingiae
           Eb661]
 gi|299061673|emb|CAX58789.1| Glutamate/aspartate transport system permease [Erwinia billingiae
           Eb661]
          Length = 246

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    + L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++I+I L M
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINIVIMLLM 230

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 231 SLVERKVRL 239



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +++Y   +  GF  T  ++    I A ++G+L G  R   N+L++ +   YVE+FRNIP 
Sbjct: 18  NTTYLGWLWSGFQVTIAVSVCAWIIALLVGSLFGILRTVPNRLLSTLGTCYVELFRNIPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           +V  F  Y  +  +LP
Sbjct: 78  IVQFFIWYLVIPELLP 93


>gi|225860606|ref|YP_002742115.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|225726892|gb|ACO22743.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390343|gb|EGE88684.1| putative ABC-type amino-acid transporter permease protein
           [Streptococcus pneumoniae GA04375]
          Length = 225

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 43/238 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI     +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
              PLL     + +GLP +           D  ++            P + +  + +  Y
Sbjct: 68  ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+K
Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           N+S    +   DL+ V  +     G  I   L    +Y +L   +A F   M ++N K
Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQVNKK 221



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH+I++P
Sbjct: 80  ----LPLISDHTIMIP 91


>gi|107100791|ref|ZP_01364709.1| hypothetical protein PaerPA_01001819 [Pseudomonas aeruginosa PACS2]
 gi|296390283|ref|ZP_06879758.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
          Length = 221

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LG VL+L     S+      G      +++PLL + T+  F +P +    L++    D P
Sbjct: 34  LGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFI----LRWITGEDTP 89

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V               F S  +A   + AA+  EIVR+G+ A+P+GQM AA ALG+T+ +
Sbjct: 90  V-------------GAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQ 136

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA R + P L  Q + L +++SL   VG  D ++   +  +  GQA E ++ 
Sbjct: 137 TMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIF 196

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              +Y  +S   +  + RL  ++
Sbjct: 197 AGLVYFVVSFTASFAVKRLQKRL 219



 Score = 36.2 bits (82), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L   G++    +GT++   RLS +KL++ I   YV  FR+IP L+VI + Y +
Sbjct: 16  GMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 75

Query: 152 V 152
           V
Sbjct: 76  V 76


>gi|91780196|ref|YP_555403.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692856|gb|ABE36053.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 252

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 14/178 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T+  +A + V + +LG  L+L  +  S              +  PLL    F  FG   
Sbjct: 22  MTLALSASVAVCATLLGFALALARSAPSAALRRAAAGYVLIFRNSPLLVQLLFWYFGAAV 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVS-P--EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L+   L   L+    V+     +G  T+S P  EF++ ++ L+CY+  FI E  R+G+  
Sbjct: 82  LLPDGLMNWLNTPHVVV-----LGPVTLSWPTFEFVAGWLGLTCYSTTFIGEEFRAGMRG 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           V  GQ +AA ALGLT     R V+LPQA+R   PPL  QY+N++KNSSL +A+GFA+L
Sbjct: 137 VRDGQYQAAAALGLTRFATFRHVILPQAVRIATPPLAGQYMNVIKNSSLTMAIGFAEL 194


>gi|224824086|ref|ZP_03697194.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224603505|gb|EEG09680.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 247

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 84/132 (63%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +AL+    A+I EI R+G+ ++ +GQMEAA +LGL++ +A + V++PQA R ++P
Sbjct: 116 FISGLLALTLNAGAYITEIFRAGIQSIDKGQMEAARSLGLSYGQAMKAVIVPQAFRRMLP 175

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL ++ + LLK+SSL  A+G A+L     T+     +  E  L   F+YL+L++++A  +
Sbjct: 176 PLGNEAIMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEPYLTISFLYLALTMLMAWGI 235

Query: 386 NRLNAKIALKEK 397
            RL  +  +  +
Sbjct: 236 GRLEKRFQIASR 247


>gi|15596537|ref|NP_250031.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|116049292|ref|YP_791905.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218892555|ref|YP_002441424.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254234459|ref|ZP_04927782.1| hypothetical protein PACG_00311 [Pseudomonas aeruginosa C3719]
 gi|254239711|ref|ZP_04933033.1| hypothetical protein PA2G_00335 [Pseudomonas aeruginosa 2192]
 gi|313106331|ref|ZP_07792574.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
 gi|9947280|gb|AAG04729.1|AE004563_6 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|115584513|gb|ABJ10528.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166390|gb|EAZ51901.1| hypothetical protein PACG_00311 [Pseudomonas aeruginosa C3719]
 gi|126193089|gb|EAZ57152.1| hypothetical protein PA2G_00335 [Pseudomonas aeruginosa 2192]
 gi|218772783|emb|CAW28568.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310879076|gb|EFQ37670.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
          Length = 222

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 23/203 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LG VL+L     S+      G      +++PLL + T+  F +P +    L++    D P
Sbjct: 35  LGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFAVPFI----LRWITGEDTP 90

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V               F S  +A   + AA+  EIVR+G+ A+P+GQM AA ALG+T+ +
Sbjct: 91  V-------------GAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKGQMGAAQALGMTYGQ 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA R + P L  Q + L +++SL   VG  D ++   +  +  GQA E ++ 
Sbjct: 138 TMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARSRGDIIGQANEFLIF 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              +Y  +S   +  + RL  ++
Sbjct: 198 AGLVYFVVSFTASFAVKRLQKRL 220



 Score = 36.2 bits (82), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L   G++    +GT++   RLS +KL++ I   YV  FR+IP L+VI + Y +
Sbjct: 17  GMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWFYFA 76

Query: 152 V 152
           V
Sbjct: 77  V 77


>gi|241661991|ref|YP_002980351.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240864018|gb|ACS61679.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 242

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 76/117 (64%), Gaps = 2/117 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP + R I+P
Sbjct: 107 FLCAMLCLGTFTAARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRYVMLPMSFRIIVP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWMFIYLSLSIM 380
           PLTS++LN+ KNS++A  +G  +L + G  +++ T Q  E  I +  M++ ++L++M
Sbjct: 167 PLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVM 223



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A +IG+++G  R   NK ++ +   YVEVFRNIP
Sbjct: 16  QNQTYLDWLLAGLKTTVVLGLSSWIIALVIGSVLGVLRTVPNKWLSGLAAAYVEVFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDH 161
            +V +F  Y  +  ++P  D+
Sbjct: 76  LIVQLFIWYFVMPELVPGGDY 96


>gi|330813244|ref|YP_004357483.1| putative amino acid ABC transporter, permease protein [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486339|gb|AEA80744.1| putative amino acid ABC transporter, permease protein [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 239

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 111/205 (54%), Gaps = 29/205 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRH------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V + V+G+++++ A   +++      F+ +  +++PLL +  ++ +GLP L         
Sbjct: 56  VIAMVVGLLIAIPAITKNKYLSYVNVFYVEVVRSVPLLVLILWVYYGLPILT-------- 107

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G + SP F+S  IALS   +AF+AEI R G+ A+ + Q EAA +LG
Sbjct: 108 --------------GLSFSP-FVSGIIALSISESAFMAEIFRGGINAIKKTQWEAATSLG 152

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   K  +LV+LPQA + I+P L +Q++ +LK SSL   +G +DL      ++  T + +
Sbjct: 153 LNFSKKLKLVILPQAFKVILPALGNQFVYVLKMSSLVSIIGISDLTRKANELVVSTYRPL 212

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
           EI    +  YL L ++++ F+ RL 
Sbjct: 213 EIYTFLILEYLVLILIVSYFVRRLE 237


>gi|182435042|ref|YP_001822761.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326775558|ref|ZP_08234823.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178463558|dbj|BAG18078.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326655891|gb|EGE40737.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 214

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 5/111 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E++RSG+  VPRGQ EAA +LG+   +    V+LPQA RS+IPP+ S 
Sbjct: 89  LALGCYTSAFICEVLRSGINTVPRGQGEAARSLGMNFGQTLSTVVLPQAFRSVIPPVGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + L KNS++A A    +L+    T +N+ G +I    IW FI++++  +I
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSI----IWSFIWIAVGYLI 194


>gi|311279447|ref|YP_003941678.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308748642|gb|ADO48394.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 252

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 78/131 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ +GQMEA+ ALG+   K+ R V+LPQA R I+P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASCALGMPWWKSMRKVILPQAFRRILP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ ++A  +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVVYWVITFLLAQLV 241

Query: 386 NRLNAKIALKE 396
           NRL  +    +
Sbjct: 242 NRLEKRFGKSD 252


>gi|330815543|ref|YP_004359248.1| Glutamate/aspartate transport system permease protein [Burkholderia
           gladioli BSR3]
 gi|327367936|gb|AEA59292.1| Glutamate/aspartate transport system permease protein [Burkholderia
           gladioli BSR3]
          Length = 225

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 80/132 (60%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  IA S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+++ +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMSYGQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+++P L +Q + L +++SL   +  AD       I ++ G ++E++L     Y  + ++
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATNIGDRDGTSVEMVLFAGACYFVVCVL 211

Query: 381 IALFMNRLNAKI 392
            +  +  L  K+
Sbjct: 212 ASALVKGLQKKV 223



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +    ++   + GTL+   RLS  K + W  R+YV VFR+IP ++V+ + +  
Sbjct: 19  GAIVTLQITLLAIVVGIVWGTLLALMRLSGVKPLQWFSRLYVTVFRSIPLVMVLLWFFLI 78

Query: 152 VLSVL 156
           V  VL
Sbjct: 79  VPQVL 83


>gi|323697578|ref|ZP_08109490.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457510|gb|EGB13375.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 587

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 80/134 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF    +    +T AF+AEI+R+G+ ++P+G +EAA + GLT  +  R V+LP A R II
Sbjct: 136 EFWCATVGCGIFTGAFMAEIIRAGIQSIPKGLLEAAYSSGLTFPQTLRKVILPLAFREII 195

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL S++LN +KN+SLA+ +G  +L      + + T +  E   +   +YL LS+ IA  
Sbjct: 196 PPLGSEFLNNMKNTSLAMTIGVTELCWSMTEVYSLTYRTFEAFSVATVVYLGLSLSIAGI 255

Query: 385 MNRLNAKIALKEKK 398
           +  +N ++ +  + 
Sbjct: 256 LYIVNERLKIMPRD 269



 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 17/202 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+V+ +      R  H +  +   LLYI   LI G+P +++I   YQ         
Sbjct: 394 SFFIGLVVGM-----GRTAHNRVFRIPCLLYIE--LIRGVPLILVILWFYQ--------A 438

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F+    V   F +  IA++ +  A+IAE VR G+  +P GQ+EAA A GLT+ +  R
Sbjct: 439 ILEFVFKVDVQ-AFWAATIAMTFFFGAYIAETVRGGIENIPPGQVEAAKASGLTYLQTMR 497

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWM 371
            ++LPQA++ ++P L   ++   K++SLA  +G  +L      I N+      EI     
Sbjct: 498 KIVLPQALKQMLPALVGMFIAAFKDTSLAYIIGVMELTRAAYAINNRIMVYPFEIYTTVA 557

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y   S  ++L+  RL  K++
Sbjct: 558 VLYFVFSYFMSLYAKRLERKLS 579



 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 27/41 (65%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A ++GT+ G  RLS+ K V W    YVE+FRN P L+ +FF
Sbjct: 73  ALVMGTVFGLARLSSFKPVYWFSTCYVELFRNTPLLIQLFF 113



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 30/45 (66%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154
           IG +VG GR + N++    C +Y+E+ R +P ++VI + Y+++L 
Sbjct: 397 IGLVVGMGRTAHNRVFRIPCLLYIELIRGVPLILVILWFYQAILE 441


>gi|325971014|ref|YP_004247205.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta sp. Buddy]
 gi|324026252|gb|ADY13011.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 286

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 90/142 (63%), Gaps = 12/142 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G+P LV      QL F    +G+F  I G       ++  +ALS    A++ EIVR+
Sbjct: 130 LIRGIPLLV------QLIFIYYAMGRFFKIEG------MIAAVVALSICFGAYMGEIVRA 177

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQMEAAIALGL+  +A R V+LPQ ++ ++P + ++++++LK+SSL   +  +
Sbjct: 178 GIQAIPKGQMEAAIALGLSRSQAFRYVILPQTIKVVLPAIGNEFISMLKDSSLVSTIALS 237

Query: 348 DLVSVGGTIINQTGQAIEIILI 369
           D++  G   I++T  ++E +L+
Sbjct: 238 DILRKGREYISRTFLSLETMLV 259



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 31/54 (57%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           TF      +I A +IGT+ G G +S  + V  +  VYVE+ R IP LV + F+Y
Sbjct: 91  TFQATIFAIIGALVIGTITGLGSVSKKRWVNMVSGVYVELIRGIPLLVQLIFIY 144


>gi|167461579|ref|ZP_02326668.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 217

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 110/201 (54%), Gaps = 14/201 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F+ + G +L +F   L R    K  K +   YI    + G P LV +   Y ++F  P  
Sbjct: 28  FTVICGTILGIFIC-LMRISKIKIVKGIAAAYIE--FLRGTPLLVQL---YIIYFALPQF 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G           P  +S   AL+  +AA++AEI R+G+ ++ +GQMEAA +LG+TH  A 
Sbjct: 82  G--------ISLPGMVSGIAALTLNSAAYVAEIFRAGIESIDKGQMEAARSLGMTHNMAM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           +L+++PQA+R+I+P L ++++ ++K SS+   VG  DL+    T+   T +A E +++  
Sbjct: 134 KLIIIPQAIRNILPALGNEFIVIIKESSIVSIVGITDLMFNADTVRGVTYKAFEPLIVAA 193

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            +Y  ++  ++  + +   +I
Sbjct: 194 VVYFIMTFTLSKLLGKFERRI 214



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++Y    L G   T  LAF  +I  TI+G  +   R+S  K+V  I   Y+E  R  P L
Sbjct: 9   ATYWPMFLKGAGYTLVLAFFTVICGTILGIFICLMRISKIKIVKGIAAAYIEFLRGTPLL 68

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLP 166
           V ++ +Y        +P   I LP
Sbjct: 69  VQLYIIY------FALPQFGISLP 86


>gi|224826755|ref|ZP_03699855.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224600975|gb|EEG07158.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 224

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 111/205 (54%), Gaps = 23/205 (11%)

Query: 196 LGIVLSLF---ATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LG VL+L    + RL   +  F+    +++PLL + T+  F +P +            K 
Sbjct: 37  LGTVLALMRLSSNRLLSGASKFYVNYFRSIPLLLVITWFYFVVPLIF-----------KW 85

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           + G+F  +G       F S  +A   + AA+ AEIVR+G+ ++ +GQ+ AA ALG+T+ +
Sbjct: 86  ISGEFVAVG------AFTSCLVAFMMFEAAYYAEIVRAGVQSISKGQLNAAYALGMTYGQ 139

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A RL++LPQA R ++P L  Q + L +++SL  AVG  D ++   +  +  GQ  E +++
Sbjct: 140 AMRLIILPQAFRKMMPLLLQQSIILFQDTSLVYAVGLMDFLNTARSKGDIVGQPNEFLIL 199

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
              +Y  +S   +  + RL  ++A+
Sbjct: 200 AGVVYFVISFGASTVVKRLQKRLAV 224


>gi|91781317|ref|YP_556524.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693977|gb|ABE37174.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 299

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 97/175 (55%), Gaps = 8/175 (4%)

Query: 231 GLPTLVLIALKYQLH-------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           G+P LV +   Y L        F  P LG         ++P   +  + L     A++AE
Sbjct: 123 GIPALVQLIFWYNLSAIFPHIGFSLPGLGSMFVDANKAITP-MTAAVLGLGLCEGAYMAE 181

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG++ +  GQ EAA+A+GL+  +A   V+LPQA+R I+PP  +Q + ++K +SLA  
Sbjct: 182 IVRSGILGIDAGQREAALAVGLSRAQAMLKVILPQALRIIVPPTGNQVIGMMKLTSLASV 241

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + F +L++    I N+T + I ++++    YL+LS+++++    L  +    +++
Sbjct: 242 ISFTELLTSAQLIFNRTFEVIPLLIVASLWYLALSLVLSIGQRYLEQRFGRYKRR 296


>gi|326333230|ref|ZP_08199477.1| glutamate permease [Nocardioidaceae bacterium Broad-1]
 gi|325948874|gb|EGD40967.1| glutamate permease [Nocardioidaceae bacterium Broad-1]
          Length = 229

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 36/183 (19%)

Query: 191 VFSFVLGIVLSLFATRLS-----RHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKY 242
           +FS +LG+VL+ F  R+S     R        T +  PL  +  F +FGL         Y
Sbjct: 27  IFSLLLGVVLATF--RVSPVPVLRWIGSAVVYTFRNTPLTLVMFFTLFGL--------SY 76

Query: 243 QL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           QL   FDK +L + NF         ++++ +ALS YT+ F+ E++RSG+  VP GQ EAA
Sbjct: 77  QLGVSFDKELLYRNNF---------WLAV-LALSVYTSTFVCEVLRSGINTVPLGQAEAA 126

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359
            A+GLT  +  RL++LPQA+RS+I PL S  + + KN+++AV +G         T++N+ 
Sbjct: 127 RAIGLTFTQNLRLIVLPQALRSVINPLASVLIAMTKNTTVAVTIGVTT-----ATMVNEA 181

Query: 360 TGQ 362
           +GQ
Sbjct: 182 SGQ 184


>gi|241765004|ref|ZP_04763000.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241365401|gb|EER60194.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 252

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ + +AL  +T+A IAE VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I
Sbjct: 109 PGFVLVVLALGFFTSARIAEQVRSGIQALPRGQRYAGLAMGFTTFQTYRHVLLPMAFRII 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV  A+L         +T + +E+ L     Y    ++ A 
Sbjct: 169 IPPLTSETMNIFKNSSVAFAVSVAELTMFAMQAQEETSRGVEVYLAVTACY----VVSAF 224

Query: 384 FMNRLNAKIALKEK 397
            +NR+ A I  + +
Sbjct: 225 AINRIMAFIEKRAR 238



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 8/70 (11%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP----IPDHS-IV 164
           IGTL     L    +V  +C  +VE+FRNIP LV IF  Y  V ++ P    +P    +V
Sbjct: 59  IGTLR---TLEGRPMVVRLCNAWVELFRNIPLLVQIFLWYHVVPTLFPALQAVPGFVLVV 115

Query: 165 LPFGMFLNNR 174
           L  G F + R
Sbjct: 116 LALGFFTSAR 125


>gi|312602224|ref|YP_004022069.1| Amino acid ABC transporter permease [Burkholderia rhizoxinica HKI
           454]
 gi|312169538|emb|CBW76550.1| Amino acid ABC transporter permease protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 242

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 2/141 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    F  FG  TL+   L   L  + P   Q   +       EF++ +I L+ Y+ A
Sbjct: 66  PLLVQLMFWYFGAATLLPDGLMQWL--NAPHAFQVGALSLRWPPFEFVAGWIGLTFYSCA 123

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+ E  R+GL  V  GQ +AA ALGLT  +A R V+LPQA R+ +PPL  QY+N++KNSS
Sbjct: 124 FVGEEFRAGLRGVSGGQRQAAAALGLTRWQAFRHVVLPQAARNAMPPLFGQYMNIVKNSS 183

Query: 340 LAVAVGFADLVSVGGTIINQT 360
           L +A+G A+L      +  +T
Sbjct: 184 LTMAIGLAELSYASRQVETET 204



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y   +L GF  T  LA + ++ AT+ G  +     +  +LV  +   YV VFRN P 
Sbjct: 8   EPKYVGWLLQGFGVTLALAATVIVTATVSGFALAMAHSADARLVRRVAAAYVLVFRNSPL 67

Query: 142 LVVIFFLYKSVLSVLP 157
           LV + F Y    ++LP
Sbjct: 68  LVQLMFWYFGAATLLP 83


>gi|78355443|ref|YP_386892.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217848|gb|ABB37197.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 277

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 12/210 (5%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIF-GLPTLVLIALKY 242
           +  S + G+VL L+     R   E         + +P+L I  ++ F G P LV  AL +
Sbjct: 64  YALSLLAGLVLGLWRVSRCRLLREAATFYIEIVRGIPMLVILYYIAFVGAPGLV-DALNW 122

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
            L    P++        S  S +F    I AL+   +AFIAEIVR+G+ +V  GQMEAA 
Sbjct: 123 LLS---PLIEAGLTARISVRSLDFTWRAILALTVGYSAFIAEIVRAGVESVAAGQMEAAR 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+  +A R V+LPQA+R+++PPL + ++ +LK+S+L  A+G  D+  +G      T 
Sbjct: 180 SLGLSRWQAMRKVVLPQALRNVLPPLANDFVAMLKDSALVSALGVQDITQLGKVYSASTF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              E   +  F+YL ++I ++L +  L  +
Sbjct: 240 MFFETYNVVAFLYLVMTIGLSLCIRGLERR 269


>gi|260774959|ref|ZP_05883859.1| putative amino acid ABC transporter permease protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260609049|gb|EEX35208.1| putative amino acid ABC transporter permease protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 246

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 23/178 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++P+L +  ++ +GLPTL+ I+L    HF   V                    IAL+  
Sbjct: 89  RSIPVLVLLLWVYYGLPTLLDISLD---HFWAGV--------------------IALTVA 125

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF+AE+ R G+ ++ +GQ EAA +LGL + +  RLV+LPQA R I+PPL +Q++ +LK
Sbjct: 126 ESAFMAEVFRGGIQSIAKGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILK 185

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSL   +G +DL      ++      +EI    +  YL L ++++  +  L  +IA+
Sbjct: 186 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLILILLVSQAVRWLEQRIAI 243



 Score = 42.7 bits (99), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF +T  ++   M  A +IG LV    LS  + +  + RVYVEV R+IP LV++ ++Y  
Sbjct: 44  GFYDTITISLLSMTLAMLIGLLVALPSLSNARWLNGLNRVYVEVIRSIPVLVLLLWVYYG 103

Query: 152 VLSVLPIP-DH 161
           + ++L I  DH
Sbjct: 104 LPTLLDISLDH 114


>gi|78358111|ref|YP_389560.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220516|gb|ABB39865.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 309

 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 19/212 (8%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           K+   S VL  V+ L A   RLSR      G+AL + Y+ T  +   P L+ + + Y   
Sbjct: 108 KVSAVSLVLAAVIGLAAVLLRLSRSV---VGRALAVCYLET--VRNTPLLIQLFVMY--F 160

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P+ G             F S  +ALS +  A+I+EI+R+G+ AVP GQ EAA +LGL
Sbjct: 161 VVAPLTGM----------DRFFSAVLALSLFEGAYISEIIRAGIQAVPAGQWEAARSLGL 210

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T     R V+LPQA+  ++PPLT Q + L+K+S+L   +   DL      II +T    E
Sbjct: 211 TRAATYRKVVLPQALGHVLPPLTGQMVTLVKDSALVSTIAIYDLTMQAQAIIAETFLVFE 270

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I  +   +YL +++ ++L   RL  ++    K
Sbjct: 271 IWFMVAAMYLVVTLSLSLLAQRLECRLRTGSK 302


>gi|297156742|gb|ADI06454.1| putative glutamate ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 215

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 78/126 (61%), Gaps = 2/126 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL CYT+ FI E VRSG+  VP GQ EAA +LG+T  +  R+++LPQA R++IPPL+S +
Sbjct: 91  ALGCYTSTFICEAVRSGIGTVPIGQAEAARSLGMTFFQTLRMIILPQATRTVIPPLSSIF 150

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLNA 390
           + L KNS++A A    +L SV   +++  G  I  I +W+ + YL ++  I+     L  
Sbjct: 151 IALTKNSAIAGAFSVTELFSV-SKLLSDKGYPIGWIFLWIAVAYLVITFSISGLFRLLER 209

Query: 391 KIALKE 396
           ++ +  
Sbjct: 210 RMEVSR 215


>gi|94309345|ref|YP_582555.1| amino acid ABC transporter permease [Cupriavidus metallidurans
           CH34]
 gi|93353197|gb|ABF07286.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 242

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 78/129 (60%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + +F++  + L  +TAA + E VRSG+ ++PRGQ  A +A+G T  +  R VLLP A R 
Sbjct: 104 TQQFLAAMLCLGTFTAARVCEQVRSGINSLPRGQKNAGLAMGFTLPQTYRYVLLPMAFRV 163

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PPLTS++LN+ KNS++A  +G  +L + G  +++ T +  E  +    +Y  ++  + 
Sbjct: 164 IVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTARPYESFIAVTVLYALINFTVM 223

Query: 383 LFMNRLNAK 391
           L M  +  +
Sbjct: 224 LIMRWVERR 232



 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++ +Y   ++ G   T  L  S  I A  IG+++G  R   NK ++ I   YVE+FRNIP
Sbjct: 16  ANETYLDWMISGLKVTIALGLSSWIIALAIGSVLGVLRTVPNKWLSGIAATYVEIFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y     +LP
Sbjct: 76  LLVQLFIWYFVGPELLP 92


>gi|320174702|gb|EFW49834.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella dysenteriae CDC 74-1112]
          Length = 132

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 77/124 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+
Sbjct: 2   LCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSE 61

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +  
Sbjct: 62  MMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAIIMLVMTLVER 121

Query: 391 KIAL 394
           K+ L
Sbjct: 122 KVRL 125


>gi|320159829|ref|YP_004173053.1| amino acid ABC transporter permease protein [Anaerolinea
           thermophila UNI-1]
 gi|319993682|dbj|BAJ62453.1| amino acid ABC transporter permease protein [Anaerolinea
           thermophila UNI-1]
          Length = 274

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 103/181 (56%), Gaps = 11/181 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL    F  +  P++V       L     V    NF+     +P  M++     CY
Sbjct: 105 RGIPLLVQLYFWYYAFPSIV-----RDLGTQWNVESMKNFVA----NPYVMAIAGLTLCY 155

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ E+ R+G+ ++P+GQMEAA +LG+T+ +A R ++LPQA+R I+PP+ ++++ LLK
Sbjct: 156 -GAYMTEVYRAGIQSIPKGQMEAARSLGMTYFQAMRYIILPQAIRVILPPVGNEFITLLK 214

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SSL  AV  ADL   G      T   + I L+   +YL ++++ A  +  + A+++ KE
Sbjct: 215 DSSLVSAVAVADLTRRGREFQAITPLPLHIYLMIGLMYLIMTLLSARVVAMIEARMS-KE 273

Query: 397 K 397
           +
Sbjct: 274 R 274


>gi|307941624|ref|ZP_07656979.1| glutamine transport system permease protein GlnP [Roseibium sp.
           TrichSKD4]
 gi|307775232|gb|EFO34438.1| glutamine transport system permease protein GlnP [Roseibium sp.
           TrichSKD4]
          Length = 265

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 115/217 (52%), Gaps = 18/217 (8%)

Query: 190 FVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---AL 240
           F  +  LG+VL++       A R    F+ +  + LP+L +  ++ F    LV+    A+
Sbjct: 58  FSLASALGLVLAVASLSRFLAVRQVARFYIEVVRGLPILVLLLYIAFVAAPLVIALINAI 117

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L  D      F         P      +AL+   +AFIAE+ R+G+ AV +GQ+EAA
Sbjct: 118 IEPLGMDPLRTRDF---------PLIWRAILALTIGYSAFIAEVFRAGIQAVDKGQIEAA 168

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG++     RL++ PQA+R+I+PPL + ++ ++K+SSL   +G AD+  +G      +
Sbjct: 169 KALGMSGWLRFRLIVFPQALRTILPPLGNDFVAMIKDSSLVSVLGVADITQLGKVYAAGS 228

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  E   +  FIYL++++ ++L + +   K  ++E+
Sbjct: 229 FRFFETYNVVAFIYLTMTVTLSLALRKFERKTRIEER 265


>gi|302522779|ref|ZP_07275121.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|302431674|gb|EFL03490.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 214

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VP+GQ EAA +LG++  +    V+LPQA R++IPP+ SQ
Sbjct: 89  LALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVILPQAFRAVIPPVGSQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
            + L KNS++A A    +L+    T +N+ G  I  + +W+ + YL L++ I+   N L 
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGFNIVWVFVWIAVGYLILTLAISALFNYLE 207

Query: 390 AK 391
            +
Sbjct: 208 HR 209


>gi|222832612|gb|EEE71089.1| ABC transporter family protein [Populus trichocarpa]
          Length = 465

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 68/105 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ + +AL  +T+A IAE VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I
Sbjct: 149 PGFVLVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMAMGFTTFQYYRYVLLPMAFRII 208

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           IPPLTS+ +N+ KNSS+A AV  A+L         +T + IEI L
Sbjct: 209 IPPLTSETMNVFKNSSVAFAVSVAELTMFAMQAQEETSRGIEIYL 253



 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 76/128 (59%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I    + AA+ +EI+R+G+ ++PRGQ+ A  A+G+T+ +  RLV+LPQA R+++P 
Sbjct: 336 VSAIITFIAFEAAYFSEIMRAGIQSIPRGQVSAGQAMGMTYGQNMRLVVLPQAFRNMLPV 395

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q + L +++SL  A+G  D++          G+ IE  L     Y  L   ++  + 
Sbjct: 396 LLTQTIILFQDTSLVYAIGAYDMLKGFEVAGKNYGRPIESYLAAGVTYFVLCYSLSWAVK 455

Query: 387 RLNAKIAL 394
           RL+ KIA+
Sbjct: 456 RLHKKIAI 463



 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 10/112 (8%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+ Q       D +Y   +L  +  T  ++   ++ A ++G+L+G  R    +   WI R
Sbjct: 56  EVGQSCFGKNGDITYLDWMLSAWGWTISVSLLSLVIALVVGSLIGTLRTLEGR--PWIVR 113

Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP----IPDHS-IVLPFGMFLNNR 174
           +   +VE+FRNIP LV IF  Y  V S +P    +P    +VL  G F + R
Sbjct: 114 LGNAWVELFRNIPLLVHIFMWYHVVPSFVPALKSLPGFVLVVLALGFFTSAR 165


>gi|242279379|ref|YP_002991508.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122273|gb|ACS79969.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 269

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 25/252 (9%)

Query: 146 FFLYKSVLSV------LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           + LYK   S+        +P     L  G F+    L    +T++     FV +F++G+ 
Sbjct: 32  YLLYKGTESLGYNWQWFRVPGFFFSLNEGKFIPGPLLEGLGVTLEITGLSFVLTFIIGLG 91

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
            ++   RLS  F   T KA+  +Y+   +I   P  +LI L +      P++G    I G
Sbjct: 92  TAI--MRLSGSF---TAKAIARIYLE--IIRNTP--LLIQLFFIYFVAAPIIG----ING 138

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                 F +  IALS +  A+ +EI R+G+ ++ RGQ EAA +LG   + A   V+LPQA
Sbjct: 139 ------FWASVIALSLFEGAYASEIFRAGITSIDRGQWEAAFSLGGDKKFAYINVILPQA 192

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +  I PPL  Q + L+K+S+L   V   DL   G +II++T    EI  I   +YLS+++
Sbjct: 193 VPRIAPPLAGQAIALVKDSALVSTVAIYDLTMQGQSIISETFLTFEIWFIVAAVYLSITL 252

Query: 380 MIALFMNRLNAK 391
           +++  +++   K
Sbjct: 253 LLSWVLDKTARK 264


>gi|209517528|ref|ZP_03266368.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502061|gb|EEA02077.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 225

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 79/126 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+T+ +A RL++LPQA R+++P L
Sbjct: 99  SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMTYAQAMRLIVLPQAFRAMVPLL 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   +  AD       I ++ G  +E++L    +Y  + ++ +  +  
Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGAVYFVICVIASSLVKG 218

Query: 388 LNAKIA 393
           L  K+A
Sbjct: 219 LQKKVA 224


>gi|120609003|ref|YP_968681.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120587467|gb|ABM30907.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 260

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 12/157 (7%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +T +  PL + + F I+   G P LV I   Y   F  PVL     + G  + P+F +  
Sbjct: 81  RTARWTPLRWAARFYIWVIRGTPLLVQILFVY---FALPVL-----VPGLNL-PDFAAAV 131

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +E +R+GL+AVPRGQ EAA ALGL+       V+ PQA +  +PPL S 
Sbjct: 132 VALGLNVGAYNSEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVFPQAFKISLPPLVSN 191

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           ++ LLK+SSLA A+G  +L +VG  I + T Q I  +
Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGNRIQSATFQPIATL 228


>gi|218135088|ref|ZP_03463892.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990473|gb|EEC56484.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC
           43243]
          Length = 508

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 118/214 (55%), Gaps = 20/214 (9%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243
           I +F+ ++GIVL  F   + R  H+K G      A+  +Y++  ++ G P +V + + Y 
Sbjct: 310 ITLFAIIIGIVLG-FLIAIVRTNHDKNGGLTILNAICKVYLT--IVRGTPVMVQLLIIYY 366

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F             S  + + +   IA    +AA++AE+VRSG++AV  GQ EA  +L
Sbjct: 367 VIF------------ASVNTSKILVAVIAFGLNSAAYVAEVVRSGIMAVDNGQFEAGRSL 414

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +  + ++LPQA+++I+P L +++++LLK +S++  +G  DL   G  I + T + 
Sbjct: 415 GLNYSQTMKSIILPQAVKNILPALGNEFISLLKETSISGYIGLMDLTKGGDIIRSITYEP 474

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              ++    IYL + ++++  + RL  ++   E+
Sbjct: 475 FMPLIAVAIIYLVIVMILSYGVGRLERRLKKNER 508


>gi|328470613|gb|EGF41524.1| amino acid ABC transporter permease protein [Vibrio
           parahaemolyticus 10329]
          Length = 265

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 19/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     +    +T++ +     F+ VLG+V +L   RLS     K G 
Sbjct: 43  VPDYIAFYEDGEWWPAELIDGLLVTLNISVISLFFTLVLGLVTALL--RLS---DSKVGN 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +   Y+   +I   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 98  VIGTTYVE--VIRNTPLLVQIYLLYFVF--GPVIGL----------DRFSTAVLALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLTNEVVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SS+   +   DL +    I+++T    EI      IYL+L++ ++     L  K+    +
Sbjct: 204 SSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWR 263

Query: 398 K 398
           K
Sbjct: 264 K 264


>gi|188590807|ref|YP_001795407.1| high-affinity glutamine transporter, ABC transporter [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937701|emb|CAP62685.1| high-affinity glutamine transport protein, ABC transporter,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 222

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 82/129 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   I L  Y+ A+++EIVR  + +V +GQMEAA ++G++  +A R ++LPQA+  +
Sbjct: 87  PAFVCGVIGLGIYSGAYVSEIVRGAIQSVDKGQMEAARSIGMSSGQAMRAIILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +  ADL+  G  II+ + +++E+ L    +YL L+    L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSLEVYLAIALVYLILTSAAGL 206

Query: 384 FMNRLNAKI 392
            + R   ++
Sbjct: 207 ILRRAEQRL 215


>gi|163734792|ref|ZP_02142230.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
 gi|161391897|gb|EDQ16228.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
          Length = 239

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 87/173 (50%), Gaps = 13/173 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL       F +P +V       +  D P             +PEF++  +AL  Y
Sbjct: 67  RNVPLLVQMFIWYFAVPEMVPDDWGRWMKRDMP-------------NPEFVTAVVALGLY 113

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TA+ IAE VR+G+  VP G   AA A GL   +  R VLLP + R I+PPLTS++L + K
Sbjct: 114 TASRIAEQVRAGIETVPPGLTAAATAHGLNVSQTYRYVLLPISFRMIVPPLTSEFLTVFK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           NSSLA+ +G  +L +    I   T Q  E       IY+ ++++  + M  L 
Sbjct: 174 NSSLALTIGLLELTAQSQQIAEYTFQGFEAFTAATVIYVCIALIATILMQILE 226



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 44/76 (57%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y + ++ GF  T  +A S    A +IG LVG G+   N+ +  IC  YVE+FRN+P 
Sbjct: 12  EEQYLSWLISGFGWTVSVALSAWCIAIVIGVLVGVGKTVPNRFIRAICATYVELFRNVPL 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y +V  ++P
Sbjct: 72  LVQMFIWYFAVPEMVP 87


>gi|312278470|gb|ADQ63127.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 232

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 67/92 (72%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+ + P  ++  + +  YT A+I+EI+R+G+ AVP+GQ EAA++ G T+    R+++LPQ
Sbjct: 95  GNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQ 154

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+R+I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 155 AVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 7/77 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149
           GF+ T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV  V+ F  
Sbjct: 29  GFLYTLGISIGALIVALLLGLIFGAMSSTRNKVLRGISRVYVEIFQNTPLLVQFVVVFYG 88

Query: 150 KSVLSVLPIPDHSIVLP 166
            S+L+     D ++++P
Sbjct: 89  ISILT-----DGNVMIP 100


>gi|239945338|ref|ZP_04697275.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239991795|ref|ZP_04712459.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291448800|ref|ZP_06588190.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
 gi|291351747|gb|EFE78651.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
          Length = 214

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/111 (44%), Positives = 73/111 (65%), Gaps = 5/111 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL CYT+AFI E++RSG+  VP+GQ EAA +LG+   +    V+LPQA RS+IPP+ S 
Sbjct: 89  IALGCYTSAFICEVLRSGINTVPKGQGEAARSLGMNFGQTLSTVVLPQAFRSVIPPVGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + L KNS++A A    +L+    T +N+ G +I    IW FI++++  +I
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSI----IWSFIWIAVGYLI 194


>gi|318059838|ref|ZP_07978561.1| putative glutamate ABC transporter permease protein [Streptomyces
           sp. SA3_actG]
 gi|318077305|ref|ZP_07984637.1| putative glutamate ABC transporter permease protein [Streptomyces
           sp. SA3_actF]
          Length = 214

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VP+GQ EAA +LG++  +    V+LPQA R++IPP+ SQ
Sbjct: 89  LALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLTAVILPQAFRAVIPPVGSQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
            + L KNS++A A    +L+    T +N+ G  I  + +W+ + YL L++ I+   N L 
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGFNIVWVFVWIAVGYLILTLAISALFNYLE 207

Query: 390 AK 391
            +
Sbjct: 208 HR 209


>gi|171780124|ref|ZP_02921028.1| hypothetical protein STRINF_01912 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281472|gb|EDT46907.1| hypothetical protein STRINF_01912 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 234

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 31/168 (18%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +FVLG++    ++  +R       KA+  +Y+  F                   + P+
Sbjct: 42  ILAFVLGVIFGAMSSSKNRVL-----KAIARVYVEVFQ------------------NTPL 78

Query: 251 LGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           L QF F+         G  +   F +  + +  Y  A+IAE++RSG+ AVP+GQ EAA++
Sbjct: 79  LVQFVFVYYGLAIMTNGVIMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALS 138

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            G T+ +   L++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 139 QGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T  ++   +I A ++G + GA   S N+++  I RVYVEVF+N P LV   F+Y
Sbjct: 29  GFLYTLGMSICALILAFVLGVIFGAMSSSKNRVLKAIARVYVEVFQNTPLLVQFVFVY 86


>gi|168485721|ref|ZP_02710229.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|183571097|gb|EDT91625.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
          Length = 225

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 112/234 (47%), Gaps = 35/234 (14%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP 220
           FG F N  G  F TL +   +  F+ + VLGI     +T      R+  H   +  +  P
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTP 68

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL     + +GLP +           D  ++            P + +  + +  Y  A+
Sbjct: 69  LLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLYHGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE++RSG+ ++P GQMEAA++ G T+  A RL+ LPQA R I+PPLT+Q +NL+KN+S 
Sbjct: 108 IAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTST 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
              +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 168 VAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221


>gi|302540996|ref|ZP_07293338.1| amino acid ABC transporter, permease PEB1 [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458614|gb|EFL21707.1| amino acid ABC transporter, permease PEB1 [Streptomyces
           himastatinicus ATCC 53653]
          Length = 216

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 38/242 (15%)

Query: 165 LPFGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + +  +NR L    L  T++ +A       +LG+V++  A R SR         +P+L
Sbjct: 1   MDWSVLWSNRDLYASGLWSTVELSAAAIAACTLLGLVIA--AIRTSR---------IPVL 49

Query: 223 ------YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
                 Y+  F   G P LV +   Y   F    LG    IG  +V   F +  +AL+ +
Sbjct: 50  AQFARCYLEIFR--GTPLLVQMLFIY---FGAAYLG----IGNISV---FGAALLALTLF 97

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEI RSG+ AVPRGQ EAA  LGL+  +    V+LPQ    ++PPL  QYL+L+K
Sbjct: 98  QGAYVAEIFRSGIEAVPRGQWEAARVLGLSRVQTFGTVILPQTRAIVLPPLVGQYLSLVK 157

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++S+AV +G+A+L+  G  I+++ G            YL+++++  +  + L+  +   E
Sbjct: 158 DTSIAVVIGYAELLREGQAIVDRDGHP-------GMAYLAIAVLYFVICSPLSVVVRRME 210

Query: 397 KK 398
           +K
Sbjct: 211 RK 212


>gi|261380100|ref|ZP_05984673.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria subflava NJ9703]
 gi|284797319|gb|EFC52666.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria subflava NJ9703]
          Length = 248

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALVANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L  V  TI  +     E +     IYL L+  +     RL  
Sbjct: 182 FITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSFLGWVFLRLEN 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|322374750|ref|ZP_08049264.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|321280250|gb|EFX57289.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 225

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 117/242 (48%), Gaps = 51/242 (21%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI+  + +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IA 272
              PLL     + +GLP +           D  ++               +S+Y    + 
Sbjct: 68  ---PLLVQFVIVFYGLPLIS----------DHTIM---------------ISIYWTAVLC 99

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +
Sbjct: 100 VGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIV 159

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLN 389
           NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A F   M + N
Sbjct: 160 NLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQAN 219

Query: 390 AK 391
            K
Sbjct: 220 KK 221


>gi|228983843|ref|ZP_04144038.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228775892|gb|EEM24263.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 214

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 30/185 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      V SF++G V+ +        F +  G      + LPLL I  F  F LP 
Sbjct: 21  ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              + LK ++                       ++ +AL+ + AA I+EIVRSGL+++ +
Sbjct: 81  ---VGLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+    
Sbjct: 117 GQIEAARSSGLTYVQALWYIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176

Query: 355 TIINQ 359
            I  Q
Sbjct: 177 IISGQ 181



 Score = 36.6 bits (83), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|301793799|emb|CBW36190.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae INV104]
          Length = 225

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 35/234 (14%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP 220
           FG F N  G  F TL +   +  F+ + VLGI     +T      R+  H   +  +  P
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTP 68

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL     + +GLP +           D  ++            P + +  + +  Y  A+
Sbjct: 69  LLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCMGLYHGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQ  R I+PPLT+Q +NL+KN+S 
Sbjct: 108 IAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIKNTST 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
              +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 168 VAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221


>gi|110347223|ref|YP_666041.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283334|gb|ABG61394.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chelativorans sp. BNC1]
          Length = 362

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 3/135 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   IAL+ + AA++AE++R GL ++P GQ EAA ALGL + K  RL++LPQA+R +I
Sbjct: 227 KFVRALIALTIFAAAYLAEVLRGGLQSIPSGQSEAAEALGLGYWKTQRLIILPQAIRIVI 286

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMI 381
           P LT+  + ++KN+SL + VG  DL+S G   ++       + E  L    IY +L+   
Sbjct: 287 PALTNTIIVMIKNTSLVLVVGLFDLISSGKAALSDPAWPAPSTETFLFIGLIYFALAFSF 346

Query: 382 ALFMNRLNAKIALKE 396
           A F + L    A K 
Sbjct: 347 ARFADFLERSGAEKR 361


>gi|288905750|ref|YP_003430972.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|306831848|ref|ZP_07465004.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978783|ref|YP_004288499.1| putative glutamine transport system permease [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288732476|emb|CBI14048.1| Putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
 gi|304426046|gb|EFM29162.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178711|emb|CBZ48755.1| putative glutamine transport system permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 234

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 31/168 (18%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +FVLG++    ++  +R       KA+  +Y+  F                   + P+
Sbjct: 42  ILAFVLGVIFGAMSSSKNRVL-----KAIARVYVEVFQ------------------NTPL 78

Query: 251 LGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           L QF F+         G  +   F +  + +  Y  A+IAE++RSG+ AVP+GQ EAA++
Sbjct: 79  LVQFVFVYYGLAIMTNGVIMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALS 138

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            G T+ +   L++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 139 QGFTYSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T  ++   +I A ++G + GA   S N+++  I RVYVEVF+N P LV   F+Y
Sbjct: 29  GFLYTLGMSICALILAFVLGVIFGAMSSSKNRVLKAIARVYVEVFQNTPLLVQFVFVY 86


>gi|264680313|ref|YP_003280223.1| glutamate/aspartate transporterpermease gltJ [Comamonas
           testosteroni CNB-2]
 gi|299532721|ref|ZP_07046109.1| glutamate/aspartate transport systempermease protein gltJ
           [Comamonas testosteroni S44]
 gi|262210829|gb|ACY34927.1| glutamate/aspartate transport systempermease protein gltJ
           [Comamonas testosteroni CNB-2]
 gi|298719356|gb|EFI60325.1| glutamate/aspartate transport systempermease protein gltJ
           [Comamonas testosteroni S44]
          Length = 250

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 79/134 (58%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ +  A+  +T+A IAE VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I
Sbjct: 109 PGFVLVVFAIGFFTSARIAEQVRSGIQALPRGQRYAGMAVGFTTFQTYRYVLLPMAFRII 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV  A+L         +T + +EI +        L ++ A 
Sbjct: 169 IPPLTSEAMNVFKNSSVAFAVSVAELTMFAMQAQEETARGVEIYM----AVTGLYVISAF 224

Query: 384 FMNRLNAKIALKEK 397
            +NR+ A I  + +
Sbjct: 225 IINRIMAFIEKRSR 238



 Score = 40.0 bits (92), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+ Q       D +Y   ++  +  T  +A   ++ A ++G ++G  R   ++   WI R
Sbjct: 16  EVGQSCFGKNGDITYLDWMMSAWGWTVSVALLSLVIALVLGAVIGTLRTLPDR--PWIVR 73

Query: 131 V---YVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +   +VE+FRNIP LV +F  Y  V ++ P
Sbjct: 74  LGNAWVELFRNIPLLVQVFIWYHVVPAIFP 103


>gi|312869117|ref|ZP_07729291.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095363|gb|EFQ53633.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 502

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 22/204 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG + +L     S+  H      + + YI    I G P LV I   Y        
Sbjct: 315 IFGFLLGTLFALMRLSQSKLLH-----GIAICYIE--FIRGTPMLVQIMFVY-------- 359

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G+ +   P  ++  IA+S  + A++AE++RSG+ ++P GQ EAA +LG+T +
Sbjct: 360 -----FGIGAIIQSMPALVAGIIAVSVNSGAYVAEVIRSGIQSLPIGQTEAARSLGMTKK 414

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQA+R+I P L ++++ LLK+SSL   +G  +L+     +   T + +  + 
Sbjct: 415 QTFRFIVLPQALRNIWPALGNEFITLLKDSSLVSTIGVGELMYQTQLVQADTYKGVLPLF 474

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
           I M IY  L+  +   +N    ++
Sbjct: 475 ITMMIYFILTFTLTRILNYFEGRM 498


>gi|332076441|gb|EGI86904.1| putative ABC-type amino-acid transporter permease protein
           [Streptococcus pneumoniae GA41301]
          Length = 137

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I
Sbjct: 3   PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 62

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A 
Sbjct: 63  LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 122

Query: 384 F---MNRLNAK 391
           F   M ++N K
Sbjct: 123 FGRKMEQVNKK 133


>gi|309799568|ref|ZP_07693796.1| amino acid ABC transporter, permease protein [Streptococcus
           infantis SK1302]
 gi|308116806|gb|EFO54254.1| amino acid ABC transporter, permease protein [Streptococcus
           infantis SK1302]
          Length = 227

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LGIVL+ FA R          K  PL +++   I+   G P +V I + + L H + P 
Sbjct: 33  ILGIVLA-FAQR---------SKMKPLAWLANVYIWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P      I +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 83  I-QIGVLGVDFSRLIPGI----IIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 138 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ L +     ++   EKK
Sbjct: 198 FAAFYYLIMTSILTLALKAFENRMGQGEKK 227


>gi|242279192|ref|YP_002991321.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122086|gb|ACS79782.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 337

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 114/210 (54%), Gaps = 9/210 (4%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--H 245
           K+   + V  I+L LF T L+R       K   + YI   LI G P LV + + Y +   
Sbjct: 135 KVSAIAIVFAIILGLF-TGLARISQNPALKLSAITYIE--LIRGTPLLVQMFIWYFVLGT 191

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
               +L +++    S + P +  +  +L+ +  A++AEIVR+G+ +V RGQMEAA +LG+
Sbjct: 192 LVNNMLAKYDI---SQIPPLWFGI-ASLAIFAGAYVAEIVRAGIQSVHRGQMEAARSLGM 247

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +   A + ++LPQA R I+PPL  Q+++++K+SSL   +   +L       ++ + Q  E
Sbjct: 248 SKYYAMKHIILPQAFRRILPPLAGQFISMIKDSSLLGVIAIRELTKGTREAVSTSLQPFE 307

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +  +   +YL L+   ++F+  L  K+  +
Sbjct: 308 LWFLCALLYLVLTFAFSMFVQYLEKKMVQR 337


>gi|271966004|ref|YP_003340200.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
 gi|270509179|gb|ACZ87457.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
          Length = 304

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 10/211 (4%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I V +  LG+VL +    + R  H      L   YI  F   G P LV +   Y L F 
Sbjct: 73  EISVLATALGLVLGVLVA-IMRLAHNPVLSGLATFYIWFFR--GTPVLVQLIFWYNLAFL 129

Query: 248 KPVLG---QFNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            P L     F  IG     + V   F S  + L    AA+ AE VR+G+ AV +GQ EAA
Sbjct: 130 FPELVLKVPFTMIGVKWDTNQVMTGFTSAMLGLGLNLAAYFAETVRAGIQAVDKGQTEAA 189

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+T  K  R+++LPQA+R IIPP  ++++++LK +SL   V   DL++    I    
Sbjct: 190 YALGMTPAKRMRVIVLPQALRIIIPPTGNEFISMLKTTSLVYVVAGHDLMTNASQIYKAN 249

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +E++++    Y+ ++ +      RL  +
Sbjct: 250 NLIMELLIVASLWYMLMTAVATFLQGRLERR 280


>gi|258645330|ref|ZP_05732799.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260402679|gb|EEW96226.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 212

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 17/209 (8%)

Query: 177 SFPTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           + P L M      +I  FS  +G  + LF   ++R    K  + +  +Y     I G P 
Sbjct: 9   ALPILLMGAGVTIEITAFSVAIGFFIGLFVG-IARISQFKILRIMAAVYADC--IRGTPL 65

Query: 235 LVLIALKYQLHFDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           LV I L Y   F  P+ +GQ        V P F++   A    + A+++EI R+G+ A+ 
Sbjct: 66  LVQIFLIY---FALPMAIGQ-------RVEP-FIAAVAACGINSGAYVSEIFRAGIQAID 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQMEA  +LGLT  +  R ++LPQA ++I+PPL ++++ +LK+SSL   +GF +L   G
Sbjct: 115 VGQMEAGRSLGLTWWQTMRFIILPQAFKNILPPLGNEFIAMLKDSSLVSVIGFEELTRRG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             II QT  + EI +    +YL +++ I+
Sbjct: 175 QLIIAQTYGSFEIWMTVAVLYLIMTMAIS 203


>gi|15900516|ref|NP_345120.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15902577|ref|NP_358127.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|111656913|ref|ZP_01407737.1| hypothetical protein SpneT_02001840 [Streptococcus pneumoniae
           TIGR4]
 gi|116515469|ref|YP_816031.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|14972083|gb|AAK74760.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15458108|gb|AAK99337.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116076045|gb|ABJ53765.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
          Length = 225

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221


>gi|330819484|ref|YP_004348346.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327371479|gb|AEA62834.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 222

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 84/129 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +
Sbjct: 87  PAFVCGVLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ ++   +YL L+     
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYIVIALVYLVLTQTTNF 206

Query: 384 FMNRLNAKI 392
            ++R+  ++
Sbjct: 207 ILHRVERRL 215


>gi|170699903|ref|ZP_02890932.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170135167|gb|EDT03466.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 222

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 84/129 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +
Sbjct: 87  PAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ ++   +YL L+     
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYIVIALVYLVLTQTTNF 206

Query: 384 FMNRLNAKI 392
            ++R+  ++
Sbjct: 207 ILHRVERRL 215


>gi|317122403|ref|YP_004102406.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315592383|gb|ADU51679.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 225

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 94/171 (54%), Gaps = 11/171 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T++I G P LV I + Y           F  +    V   F +  IAL+  + A++AEI+
Sbjct: 66  TWIIRGTPLLVQIYIIY-----------FGLVQYGVVLDPFPAAVIALTVNSGAYLAEII 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++P+GQMEAA +LG+++ +A R V+LPQA R +IPP+ ++++ LLK+SSL   + 
Sbjct: 115 RAGIESIPKGQMEAARSLGMSYGQAMRRVILPQAYRRMIPPMVNEFVTLLKDSSLVSIIS 174

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L+     + N T + +       F YL ++ +     + L  K+   E
Sbjct: 175 MEELMLYSRQLANATARGMWFFGYAAFYYLVMTTLFTTLGSWLERKLKDYE 225


>gi|332096852|gb|EGJ01842.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           dysenteriae 155-74]
          Length = 216

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 67/98 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHA 208



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|297156640|gb|ADI06352.1| amino acid ABC transporter [Streptomyces bingchenggensis BCW-1]
          Length = 337

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 12/172 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLG-----QFNFIGGST---VSPEFMSLYIALSCYTAAFIA 282
           G+P LV +   Y L    P +         FI   T   +SP F ++ + L    AA++A
Sbjct: 133 GIPVLVQLIFWYNLSALLPRISFGIPFGPEFISAETNTLISPWFAAI-LGLGLNEAAYMA 191

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR GL+ V  GQ EAA ALG+   +  R ++LPQAMR I+PP  SQ +N+LK +SL  
Sbjct: 192 EIVRGGLLGVDHGQTEAASALGMGRARILRRIVLPQAMRFIVPPTGSQVINMLKATSLVS 251

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
            +  ADL+    +I N+T + I ++++   W  +  S+  +   F+ R  A+
Sbjct: 252 VIALADLLYTAQSIYNRTFETIPLLVVACLWYLVMTSVLYVGQSFIERYYAR 303



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L    M   T+ G  V  GR+S N++++ +C  YV  FR IP LV + F Y  
Sbjct: 87  GIATTVELTVVAMAIGTVGGVFVAVGRMSENRVLSTVCGAYVWFFRGIPVLVQLIFWYN- 145

Query: 152 VLSVLPIPDHSIVLPFG 168
            LS L +P  S  +PFG
Sbjct: 146 -LSAL-LPRISFGIPFG 160


>gi|148983988|ref|ZP_01817307.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148998281|ref|ZP_01825750.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149005717|ref|ZP_01829456.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|168576493|ref|ZP_02722367.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|169833891|ref|YP_001694087.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|225856307|ref|YP_002737818.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|303260100|ref|ZP_07346073.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP-BS293]
 gi|303261284|ref|ZP_07347232.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP14-BS292]
 gi|303263949|ref|ZP_07349870.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS397]
 gi|303265940|ref|ZP_07351836.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS457]
 gi|303268322|ref|ZP_07354119.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS458]
 gi|307067224|ref|YP_003876190.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|307126807|ref|YP_003878838.1| glutamine ABC transporter membrane-spanning permease [Streptococcus
           pneumoniae 670-6B]
 gi|147755924|gb|EDK62968.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147762657|gb|EDK69617.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147924135|gb|EDK75247.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|168996393|gb|ACA37005.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|183577716|gb|EDT98244.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|225724546|gb|ACO20398.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|301799654|emb|CBW32214.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae OXC141]
 gi|302637418|gb|EFL67905.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638795|gb|EFL69257.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP-BS293]
 gi|302642160|gb|EFL72510.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS458]
 gi|302644524|gb|EFL74775.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS457]
 gi|302646354|gb|EFL76580.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS397]
 gi|306408761|gb|ADM84188.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|306483869|gb|ADM90738.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 670-6B]
 gi|332077038|gb|EGI87500.1| putative ABC-type amino-acid transporter permease protein
           [Streptococcus pneumoniae GA17545]
          Length = 225

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221



 Score = 36.2 bits (82), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH I++P
Sbjct: 80  ----LPLISDHIIMIP 91


>gi|294497134|ref|YP_003560834.1| glutamine ABC transporter permease GlnP [Bacillus megaterium QM
           B1551]
 gi|294347071|gb|ADE67400.1| glutamine ABC transporter, permease protein GlnP [Bacillus
           megaterium QM B1551]
          Length = 216

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 78/122 (63%), Gaps = 1/122 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + +A I+EI+RSGL ++ +GQ+EAA + GL + +  R V+LPQA+R ++PPL SQ
Sbjct: 93  VALTVFESAMISEIIRSGLKSIEKGQIEAARSSGLNYYQTLRFVVLPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++LLK++SLAV +   DL+     I  Q     + + LI   +Y  ++  +++   RL 
Sbjct: 153 FISLLKDTSLAVVIALPDLLHNAQIIYGQKQSYVVPMFLIIAMMYFIVNYALSIIARRLE 212

Query: 390 AK 391
            K
Sbjct: 213 VK 214



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+ D  + + ++ GF  T  +AF  ++ + +IG++VG  R +   +++ +    VE+ RN
Sbjct: 7   YSPD--HLSFLMEGFWVTLKVAFISIVLSFLIGSIVGILRYARIPVLSHVLAFVVEIIRN 64

Query: 139 IPPLVVIFFLY 149
           +P L++IFF Y
Sbjct: 65  LPLLLIIFFTY 75


>gi|227509839|ref|ZP_03939888.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190763|gb|EEI70830.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 235

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 31/215 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           V S++ G++L +      ++     G      + LPL+ I  F  FGLP L         
Sbjct: 32  VLSYIFGVILGVTRYVQIKYLSAIVGFVIDIIRNLPLILIIFFTYFGLPHL--------- 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G    P + S+ IA++ + AA +AEIVR+G+ ++P GQME A A G
Sbjct: 83  --------------GFKPDPIWASV-IAMAVFEAAMVAEIVRAGIASIPTGQMEGARANG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363
           L++ +A   ++LPQA+R++IP + SQ+++L+K++SLA  +   DL++    I  Q T   
Sbjct: 128 LSYWQALWYIVLPQAIRNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIYGQNTNYT 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I + L    +Y  +   ++LF   L  +I    KK
Sbjct: 188 IPMFLALAVMYFIVCYSLSLFSKYLEKRIGGGNKK 222


>gi|71064881|ref|YP_263608.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Psychrobacter arcticus 273-4]
 gi|71037866|gb|AAZ18174.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Psychrobacter arcticus 273-4]
          Length = 248

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 4/186 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266
           R    KT +A+   Y++ F    +P LV +   + +   +  P + ++ +   S  +   
Sbjct: 54  RTLPNKTARAIGTTYVTFFR--NIPLLVQLFFWFYIAPGWLTPSIQEWWYKDLSPNTSAM 111

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I L  +TAA I E VR+G+ ++P+GQ+ AA ALG +  +A + VLLPQA R I+PP
Sbjct: 112 LSASIGLGLFTAARIVEQVRTGIESLPKGQINAAYALGFSIPQAYKEVLLPQAFRIILPP 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L+S+  N  KN+S+A  VG  +L+S   TI   T  ++EI      IYL  ++ +   M 
Sbjct: 172 LSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMG 231

Query: 387 RLNAKI 392
            +  K+
Sbjct: 232 LIERKL 237


>gi|164687608|ref|ZP_02211636.1| hypothetical protein CLOBAR_01249 [Clostridium bartlettii DSM
           16795]
 gi|164603382|gb|EDQ96847.1| hypothetical protein CLOBAR_01249 [Clostridium bartlettii DSM
           16795]
          Length = 223

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 115/210 (54%), Gaps = 25/210 (11%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLI-FGLPTLVLIALKYQ 243
           V  FVLG+++ L         +L    + +  +  PL ++  F+I FGLP         Q
Sbjct: 29  VVGFVLGLLICLMKMSNFKVLKLLSSAYVQILRGTPL-FVQVFIIYFGLP---------Q 78

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L  D P +G         +S +F++   ALS  ++A+IAEI RSG+ +V +GQMEA+ +L
Sbjct: 79  LGIDFPDIG--------PISSKFIAGAFALSINSSAYIAEIFRSGIQSVDKGQMEASRSL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +    R V++PQA+++++P L ++++ L+K SS+   +G  +++   G ++    + 
Sbjct: 131 GLGYADTMRFVIVPQAIKNVLPALANEFITLVKESSVLSVIGTQEIMFKAGIVVTAVYRP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +E  +    IYL L+ +++  +  L  K+A
Sbjct: 191 MEPYIAAAVIYLVLTTILSKLVGILEKKLA 220


>gi|295702500|ref|YP_003595575.1| glutamine ABC transporter permease GlnP [Bacillus megaterium DSM
           319]
 gi|294800159|gb|ADF37225.1| glutamine ABC transporter, permease protein GlnP [Bacillus
           megaterium DSM 319]
          Length = 216

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 78/122 (63%), Gaps = 1/122 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + +A I+EI+RSGL ++ +GQ+EAA + GL + +  R V+LPQA+R ++PPL SQ
Sbjct: 93  VALTVFESAMISEIIRSGLKSIEKGQIEAARSSGLNYYQTLRFVVLPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++LLK++SLAV +   DL+     I  Q     + + LI   +Y  ++  +++   RL 
Sbjct: 153 FISLLKDTSLAVVIALPDLLHNAQIIYGQKQSYVVPMFLIIAMMYFIVNYALSIIARRLE 212

Query: 390 AK 391
            K
Sbjct: 213 VK 214



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 2/71 (2%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+ D  + + ++ GF  T  +AF  ++ + +IG++VG  R +   +++ +    VE+ RN
Sbjct: 7   YSPD--HLSFLMEGFWVTLKVAFISIVLSFLIGSIVGILRYARIPVLSHVLAFIVEIIRN 64

Query: 139 IPPLVVIFFLY 149
           +P L++IFF Y
Sbjct: 65  LPLLLIIFFTY 75


>gi|238026229|ref|YP_002910460.1| hypothetical protein bglu_1g05600 [Burkholderia glumae BGR1]
 gi|237875423|gb|ACR27756.1| Hypothetical protein bglu_1g05600 [Burkholderia glumae BGR1]
          Length = 246

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASVVCLGLFTGARVCEQVRSGIAALPKGQRAAGLAMGFTEWQTYRFVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMALM 230

Query: 386 NRLNAKIAL 394
             + ++  L
Sbjct: 231 RWIESRTRL 239



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L GF  T  ++    + A ++G+L G  R   N+ ++ +  +YV +FRNIP
Sbjct: 18  EPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVLRTVPNRWLSALGTLYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFVWYLVVPELLP 94


>gi|188583629|ref|YP_001927074.1| polar amino acid ABC transporter inner hypothetical protein
           [Methylobacterium populi BJ001]
 gi|179347127|gb|ACB82539.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium populi BJ001]
          Length = 230

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 22/217 (10%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV--------------LIA 239
           F  G+V +L  T L+       G  L LL +S     G+P L               L+ 
Sbjct: 18  FAQGMVFTLTLTALAASGGLVLGTGLALLRLS-----GVPGLTHAAKLYVELMRALPLVL 72

Query: 240 LKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           + +  +F  P LG +  IG  T      F S  I  + + AA+ +EIVR+G+ ++P GQ 
Sbjct: 73  VIFWFYFLVPYLGAWA-IGSDTPIQVGAFASALITFTLFEAAYFSEIVRAGIQSIPEGQG 131

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
            AA ALG++  +A RLV+LPQAMR+++P L +Q + L +++SL   +   D +     + 
Sbjct: 132 AAARALGMSPAQAMRLVVLPQAMRNMLPLLLTQTIVLFQDTSLVYVLSLTDFLGAASKVA 191

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + G+ +E+ L    +Y ++    +L + RL A+ A+
Sbjct: 192 QRDGRLVEMYLFAALVYFAICFAASLLVRRLQARTAI 228


>gi|315302221|ref|ZP_07873138.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria ivanovii FSL F6-596]
 gi|313629411|gb|EFR97627.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria ivanovii FSL F6-596]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMLKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRV 477



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|242238547|ref|YP_002986728.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130604|gb|ACS84906.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 224

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +LV+LPQA R++I
Sbjct: 96  RLVSAMVAFSLFEAAYYSEIIRAGIQSISRGQASAALALGMTHWQSMQLVILPQAFRAMI 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +SI  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISISASML 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 VNYLKRR 222



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 7/61 (11%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPDHSI 163
           GT++   RLS  K V+W  R+YV +FR+IP ++V+ + Y       ++VL + P  D  +
Sbjct: 38  GTVLAVMRLSPVKPVSWFARIYVNLFRSIPLVMVLLWFYLIVPSFLQNVLGLSPKTDIRL 97

Query: 164 V 164
           V
Sbjct: 98  V 98


>gi|317491135|ref|ZP_07949571.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920682|gb|EFV42005.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 224

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ +V +GQ  A++ALG+TH ++ RLV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIQSVSKGQSGASLALGMTHWQSMRLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +  
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFIISLAASAL 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 VNYLKKR 222



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  +    ++   I GT++   RLS+ KL++W   +YV +FR++P ++V+ + Y  
Sbjct: 19  GMVITLKITLIAVVFGIIWGTILAVMRLSSFKLISWFATLYVNLFRSVPLVMVLLWFYLV 78

Query: 152 VLSVL 156
           V S+L
Sbjct: 79  VPSLL 83


>gi|251790177|ref|YP_003004898.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247538798|gb|ACT07419.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 256

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 21/240 (8%)

Query: 160 DHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           DHS++L  G + N   G    TL +   A   VFSF LG+++ L   RLS          
Sbjct: 10  DHSMLLLMGQYPNGPLGGVLCTLLISLLA--VVFSFPLGVLIGL--ARLSPWRG------ 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L + +T  ++ L  + L+ + +  +F  P+L     IG +T    F ++   L  Y +
Sbjct: 60  --LRWAATAWVYTLRGIPLMMVVFWTYFCVPLL-----IGQNTSG--FSTMLCTLVIYES 110

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEIVR G+ A+P GQ EA+ ALG+++ K  RLV+LPQA+ + +P L SQ ++++K+S
Sbjct: 111 AYIAEIVRGGIQALPHGQYEASRALGMSYLKTLRLVVLPQALFNSLPSLVSQLVSIIKDS 170

Query: 339 SLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L   +   +L      + NQ   +  ++  I    Y  +   +    NRL + IA K +
Sbjct: 171 TLGYVINVPELTYAANQVSNQLLTKPFQVFAIVALSYYIICFSLTWLANRLESYIANKRR 230


>gi|217965060|ref|YP_002350738.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes HCC23]
 gi|290892961|ref|ZP_06555951.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|217334330|gb|ACK40124.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes HCC23]
 gi|290557537|gb|EFD91061.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|307570380|emb|CAR83559.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes L99]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|188591217|ref|YP_001795817.1| glutamate/aspartate transporter; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|170938111|emb|CAP63097.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 242

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 79/129 (61%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + +F++  + L  +TAA + E VRSG+ ++ RGQ  A +A+G T  +  R VLLP A R 
Sbjct: 104 AQQFLAAMLCLGTFTAARVCEQVRSGINSLARGQKNAGLAMGFTLPQTYRHVLLPMAFRV 163

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PPLTS++LN+ KNS++A  +G  +L + G  +++ T +  E  +    +Y  +++ + 
Sbjct: 164 IVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTARPYESFIAVTLMYALINVTVM 223

Query: 383 LFMNRLNAK 391
           L M  + A+
Sbjct: 224 LLMRWVEAR 232



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   ++ G   T  L  S  + A +IG+++G  R   NK +A I   YVE+FRNIP
Sbjct: 16  QNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVLRTVPNKWLAGIAATYVEIFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y  +  +LP
Sbjct: 76  LLVQLFIWYFVMPELLP 92


>gi|157363347|ref|YP_001470114.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157313951|gb|ABV33050.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 239

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 129/250 (51%), Gaps = 31/250 (12%)

Query: 148 LYKSVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           +Y ++  V P  D ++VL +  +F+N  GL    +TM  +    + SF +GIV +L   R
Sbjct: 17  IYLAISRVYPF-DWTVVLKYRRVFIN--GL---VMTMSLSGFSLLISFAVGIVFALM-RR 69

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-- 264
            S  F E       +LY+  F     P LV+I L Y               G  ++ P  
Sbjct: 70  SSGIFRE-----FAILYV--FFFRNTPLLVVILLTYY--------------GLGSIIPFD 108

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  + LS +  A+IAEIVRSGL AV +G++EAA +LGLT  +    V  PQA+R  +
Sbjct: 109 RFWAAVMGLSAFEGAYIAEIVRSGLDAVDKGELEAAFSLGLTKSEVFFYVHFPQAIRISL 168

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L  Q ++L+K+SSLA  +  A+L   G  +  QT  + E  L     Y++++ +++L 
Sbjct: 169 PALIGQSISLVKDSSLASVIALAELTMTGRQVGTQTLASFESYLTIAVFYVAVTSILSLI 228

Query: 385 MNRLNAKIAL 394
            + L  ++A+
Sbjct: 229 GHWLERRLAI 238


>gi|224500426|ref|ZP_03668775.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes Finland 1988]
 gi|254827790|ref|ZP_05232477.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258600171|gb|EEW13496.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477



 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|323492220|ref|ZP_08097378.1| ABC transporter ATP-binding/permease protein [Vibrio brasiliensis
           LMG 20546]
 gi|323313533|gb|EGA66639.1| ABC transporter ATP-binding/permease protein [Vibrio brasiliensis
           LMG 20546]
          Length = 264

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 19/225 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+ +    G +     L    +T+  +A    F+ ++G  L+  A +LS  +    G+
Sbjct: 42  VPDYILFFEDGEWWPAELLEGLLVTIKISALSLAFTLLIG--LTTAALKLSDSW---VGR 96

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            L  +YI   +I   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 97  GLANIYIE--VIRNTPLLVQIYLLYFIF--GPVIGL----------DRFATAVLALSLFQ 142

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT++ ++L+KN
Sbjct: 143 GAYTAEVFRGGLNSIPKGQFEAAKSLGLSRFFTFYDVILPQLLQRTLPPLTNEVVSLIKN 202

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           SS+   +   DL + G  I+++T    EI      IYL+L++M++
Sbjct: 203 SSIVSVMAIFDLTTEGRNIVSETAMPFEIWFTVAAIYLTLTLMLS 247


>gi|46907078|ref|YP_013467.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b F2365]
 gi|224503184|ref|ZP_03671491.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL R2-561]
 gi|254832188|ref|ZP_05236843.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes 10403S]
 gi|255520210|ref|ZP_05387447.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL J1-175]
 gi|284801176|ref|YP_003413041.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578]
 gi|284994318|ref|YP_003416086.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923]
 gi|46880345|gb|AAT03644.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|284056738|gb|ADB67679.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578]
 gi|284059785|gb|ADB70724.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477



 Score = 40.0 bits (92), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|325507790|gb|ADZ19426.1| Amino acid (glutamine) ABC transporter, permease component
           [Clostridium acetobutylicum EA 2018]
          Length = 215

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 79/124 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS  + A+IAEI+R G+IA+ +GQ EA+ ALG T+ +  R V+LPQA+R IIPP+ ++
Sbjct: 91  LGLSLNSGAYIAEIIRGGIIAIDKGQFEASKALGFTYGQTMRKVILPQAVRVIIPPMGNE 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SL   +   +L+     +++ +G A+   +I    YL L+ +     +R+  
Sbjct: 151 FIALIKDTSLVSVITMEELLRKAQLLVSSSGDAVTPYVITGVFYLVLTTVFTFLFSRIEK 210

Query: 391 KIAL 394
           K++L
Sbjct: 211 KLSL 214


>gi|47092054|ref|ZP_00229847.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|226223465|ref|YP_002757572.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes Clip81459]
 gi|254823885|ref|ZP_05228886.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254852338|ref|ZP_05241686.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|254931228|ref|ZP_05264587.1| glutamine ABC transporter [Listeria monocytogenes HPB2262]
 gi|254993068|ref|ZP_05275258.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes FSL J2-064]
 gi|300765789|ref|ZP_07075764.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|47019494|gb|EAL10234.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|225875927|emb|CAS04631.1| Putative Glutamine ABC transporter (binding and transport protein)
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258605645|gb|EEW18253.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293582776|gb|EFF94808.1| glutamine ABC transporter [Listeria monocytogenes HPB2262]
 gi|293593110|gb|EFG00871.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300513483|gb|EFK40555.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|328467121|gb|EGF38211.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes 1816]
 gi|328475546|gb|EGF46305.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes 220]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477



 Score = 40.0 bits (92), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|317406132|gb|EFV86389.1| polar amino acid transport system permease [Achromobacter
           xylosoxidans C54]
          Length = 222

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 81/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L  Y+ A+++EIVR  + +V RGQ EAA +LG++  +A R+++LPQA+  +
Sbjct: 87  PAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E  L+   IYL L+    L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVVALIYLVLTTAAML 206

Query: 384 FMNRLNAKI 392
            + R+  ++
Sbjct: 207 ILRRIEQRL 215



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 17/151 (11%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIF 146
           A++ G V T  +    ++   +IG LVG GRL+  + + + +C VY+  FR  P LV +F
Sbjct: 14  ALVRGAVVTIEVTAGALLLGCVIGLLVGVGRLNPQRSIIYNLCSVYLLFFRGTPLLVQLF 73

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FA 204
             +        +P   + LP          +   L +   +  +V   V G + S+    
Sbjct: 74  IWF------FGLPQFGVTLP--------AFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQ 119

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           T  +R     +G+A+ ++ +   ++  +P L
Sbjct: 120 TEAARSLGMSSGQAMRIIILPQAVVRMIPPL 150


>gi|308174444|ref|YP_003921149.1| glutamine ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307607308|emb|CBI43679.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens
           DSM 7]
          Length = 214

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 81/130 (62%), Gaps = 10/130 (7%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+ YT+AFIAE +R+G+  V +GQMEAA + G T+ +A R V+LPQA++ +IP
Sbjct: 86  FQAGTIALTIYTSAFIAEAIRAGIQTVSKGQMEAARSSGFTYSQAMRYVILPQAVKIVIP 145

Query: 326 PLTSQYLNLLKNSS-LAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           PL +Q+LNL+KNSS L V  G      ADLVS    ++      + + L ++ + + LSI
Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFD----VFVALFYLMLTIPLSI 201

Query: 380 MIALFMNRLN 389
            +     RL 
Sbjct: 202 GVHYLERRLG 211



 Score = 43.5 bits (101), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF++T   +F  +  +  +G L+   R++A K + WI   YVE  RNIP L++ F  Y
Sbjct: 16  GFLHTLLASFIALAGSFALGVLIAVMRITAFKPIQWIGTAYVEFIRNIPLLLITFVFY 73


>gi|238026230|ref|YP_002910461.1| glutamate/aspartate transport system permease [Burkholderia glumae
           BGR1]
 gi|237875424|gb|ACR27757.1| Glutamate/aspartate transport system permease protein [Burkholderia
           glumae BGR1]
          Length = 225

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 79/132 (59%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  IA S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMGYGQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+++P L +Q + L +++SL   +  AD       I ++ G ++E+IL     Y  + ++
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATNIGDRDGTSVEMILFAGACYFVVCVL 211

Query: 381 IALFMNRLNAKI 392
            +  +  L  K+
Sbjct: 212 ASALVKGLQKKV 223


>gi|47094853|ref|ZP_00232467.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|254898981|ref|ZP_05258905.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes J0161]
 gi|254911531|ref|ZP_05261543.1| glutamine ABC transporter [Listeria monocytogenes J2818]
 gi|254935857|ref|ZP_05267554.1| glutamine ABC transporter [Listeria monocytogenes F6900]
 gi|47016735|gb|EAL07654.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258608445|gb|EEW21053.1| glutamine ABC transporter [Listeria monocytogenes F6900]
 gi|293589477|gb|EFF97811.1| glutamine ABC transporter [Listeria monocytogenes J2818]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|26987022|ref|NP_742447.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24981641|gb|AAN65911.1|AE016219_4 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 229

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 17/206 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   V   +L I L +   R SRH++ +   A+P  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  L A+P+G
Sbjct: 71  LVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQAIPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  K    ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMI 381
           II +T   +EI       YL +S M+
Sbjct: 185 IIARTYLPVEIFFAAGVFYLVISFML 210


>gi|307330911|ref|ZP_07610044.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306883452|gb|EFN14505.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 312

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 73/117 (62%), Gaps = 3/117 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI R+GL +V  GQ EAA ALG++H K  R V+LPQAMR I+PP  ++++N+LK 
Sbjct: 166 AAYMAEICRAGLQSVDEGQSEAAQALGMSHAKTLRRVVLPQAMRVIVPPTGNEFINMLKT 225

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           +SL +AV + DL+     +   +G   E++ +   W  I  S+  +   ++ R  A+
Sbjct: 226 TSLVIAVQYWDLLQATSEVGQNSGATAEMLFLAAAWYLILTSVLSVGQYYLERYYAR 282


>gi|16802888|ref|NP_464373.1| hypothetical protein lmo0847 [Listeria monocytogenes EGD-e]
 gi|16410235|emb|CAC98925.1| lmo0847 [Listeria monocytogenes EGD-e]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 477



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|115350619|ref|YP_772458.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115280607|gb|ABI86124.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia ambifaria
           AMMD]
          Length = 246

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 75/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPTGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I  +YV +FRN+P
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTIYVSIFRNVP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFIWYLVVPELLP 94


>gi|157155672|ref|YP_001461823.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E24377A]
 gi|157077702|gb|ABV17410.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E24377A]
          Length = 224

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 80/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ   A+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSVALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|194397213|ref|YP_002037267.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194356880|gb|ACF55328.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
          Length = 225

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 112/234 (47%), Gaps = 35/234 (14%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP 220
           FG F N  G  F TL +   +  F+ + VLGI     +T      R+  H   +  +  P
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTP 68

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL     + +GLP +           D  ++            P + +  + +  Y  A+
Sbjct: 69  LLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLYHGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQ  R I+PPLT+Q +NL+KN+S 
Sbjct: 108 IAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIKNTST 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
              +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 168 VAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221


>gi|23308880|ref|NP_601160.2| glutamate ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|21903423|sp|P48245|GLUD_CORGL RecName: Full=Glutamate transport system permease protein gluD
 gi|21324723|dbj|BAB99346.1| ABC-type transporter, permease components (glutamate)
           [Corynebacterium glutamicum ATCC 13032]
          Length = 273

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 11/166 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  VFS +L +V+   A  L R    +  +    + I TF    +P L+L+   YQ+   
Sbjct: 35  KSAVFSVILALVMGT-ALGLGRISEIRILRWFCAVIIETFR--AIPVLILMIFAYQM--- 88

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                Q+N +  S ++  F ++   L+ Y  + IAEI+RSG+ ++P+GQ EAAIALG++ 
Sbjct: 89  ---FAQYNIVPSSQLA--FAAVVFGLTMYNGSVIAEILRSGIASLPKGQKEAAIALGMSS 143

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R+ T  +LLPQA+ +++P L SQ +  LK+S+L   +G+ ++V  G
Sbjct: 144 RQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQIGYIEVVRSG 189



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+ +  ++ T IL G   T   A   +I A ++GT +G GR+S  +++ W C V +E FR
Sbjct: 15  PFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIETFR 74

Query: 138 NIPPLVVIFFLYK 150
            IP L+++ F Y+
Sbjct: 75  AIPVLILMIFAYQ 87


>gi|116627889|ref|YP_820508.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101166|gb|ABJ66312.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 232

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 67/92 (72%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+ + P  ++  + +  YT A+I+EI+R+G+ A+P+GQ EAA++ G T+    R+++LPQ
Sbjct: 95  GNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAIPKGQTEAALSQGFTYADTMRIIILPQ 154

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+R+I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 155 AVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 7/77 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149
           GF+ T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV  V+ F  
Sbjct: 29  GFLYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVVFYG 88

Query: 150 KSVLSVLPIPDHSIVLP 166
            S+L+     D ++++P
Sbjct: 89  ISILT-----DGNVMIP 100


>gi|313609881|gb|EFR85296.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL F2-208]
          Length = 471

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 316 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 352

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 353 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 412

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 413 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 468



 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 267 ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 326

Query: 148 LY 149
            Y
Sbjct: 327 FY 328


>gi|293397298|ref|ZP_06641570.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
 gi|291420216|gb|EFE93473.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
          Length = 224

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           +SP+     +S  +A S + AA+ +EI+R+G+ +V RGQ  AA+ALG+TH ++ +LV+LP
Sbjct: 89  ISPKTDIRLISAMVAFSLFEAAYYSEIIRAGIQSVSRGQSSAALALGMTHWQSMKLVILP 148

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R+++P L +Q + L +++SL   +  AD      +I  + G  +E+IL   F+Y  +
Sbjct: 149 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASSIGERDGTQVEMILFAGFVYFVI 208

Query: 378 SIMIALFMNRLNAK 391
           SI  +  ++ L  +
Sbjct: 209 SIAASALVSYLKKR 222



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 13/91 (14%)

Query: 70  FEIDQGIV----PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           +E D G +    PY         ++ G + T  +  + ++   + GT++   RLS  K +
Sbjct: 2   YEFDWGSIVPSLPY---------LMQGMIVTLKITVTAVVFGIVWGTILAVMRLSPLKPI 52

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           +W   +YV +FR++P ++V+ + Y  V S+L
Sbjct: 53  SWFATLYVNLFRSVPLVMVLLWFYLVVPSLL 83


>gi|260574100|ref|ZP_05842105.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259023566|gb|EEW26857.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 266

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 118/218 (54%), Gaps = 18/218 (8%)

Query: 190 FVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + ++G+ L+L       A R +  F+ +  + +P++ +  ++ F     +++A  + 
Sbjct: 57  FALACLIGLGLALAAQSRFLALRQAARFYVEVVRGVPIIVLLLYVAFAATPALVLAWNWA 116

Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L FD      F+ +  +          IAL+   AAF+AE+ R+GL++V +GQ+EAA
Sbjct: 117 TGPLGFDPLKSRDFSLLWRAV---------IALTLAYAAFLAEVFRAGLLSVDKGQIEAA 167

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL   +  R ++ PQA R+I+PPL + ++ ++K+SSL   +G AD+  +G       
Sbjct: 168 QALGLNGWQRFRHIVFPQAFRTILPPLGNDFVAMVKDSSLVSVLGVADVTQLGKVTSAGN 227

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  E   +   IYL++++ ++L + +L A++  + ++
Sbjct: 228 FRYFETYNVVALIYLTMTVTLSLGLRKLEARLRQRSEQ 265


>gi|313624521|gb|EFR94518.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria innocua FSL J1-023]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|145295858|ref|YP_001138679.1| hypothetical protein cgR_1783 [Corynebacterium glutamicum R]
 gi|140845778|dbj|BAF54777.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 315

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 11/166 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  VFS +L +V+   A  L R    +  +    + I TF    +P L+L+   YQ+   
Sbjct: 77  KSAVFSVILALVMGT-ALGLGRISEIRILRWFCAVIIETFR--AIPVLILMIFAYQM--- 130

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                Q+N +  S ++  F ++   L+ Y  + IAEI+RSG+ ++P+GQ EAAIALG++ 
Sbjct: 131 ---FAQYNIVPSSQLA--FAAVVFGLTMYNGSVIAEILRSGIASLPKGQKEAAIALGMSS 185

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R+ T  +LLPQA+ +++P L SQ +  LK+S+L   +G+ ++V  G
Sbjct: 186 RQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQIGYIEVVRSG 231



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+ +  ++ T IL G   T   A   +I A ++GT +G GR+S  +++ W C V +E FR
Sbjct: 57  PFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIETFR 116

Query: 138 NIPPLVVIFFLYK 150
            IP L+++ F Y+
Sbjct: 117 AIPVLILMIFAYQ 129


>gi|16799914|ref|NP_470182.1| hypothetical protein lin0840 [Listeria innocua Clip11262]
 gi|16413291|emb|CAC96072.1| lin0840 [Listeria innocua Clip11262]
 gi|313619849|gb|EFR91431.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria innocua FSL S4-378]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|296533469|ref|ZP_06896049.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
 gi|296266204|gb|EFH12249.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
          Length = 384

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 18/204 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F+F L I+++L      R       K L +LY+   LI G+P   LI+L +      P+ 
Sbjct: 190 FAFPLSILVAL-----GRRSRMPAIKLLCILYVE--LIRGVP---LISLLFMASVMFPL- 238

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+       + +   IA+  + AA++AE+VR GL A+P+GQ EAA ALGL++ + T
Sbjct: 239 ----FLPEGINIDKLLRAQIAIILFAAAYLAEVVRGGLQALPKGQYEAAEALGLSYWQKT 294

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIIL 368
             ++LPQA+R +IPPL + ++   K++SL + +G  DL++ G T I +    G  IE+ +
Sbjct: 295 GFIILPQALRLVIPPLVNTFIGFFKDTSLVLIIGIFDLLTAGKTAIVEPAWQGFGIEVYV 354

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
           +   IY      ++ +   L A++
Sbjct: 355 VVGLIYFVFCFAMSRYSQNLEAEL 378


>gi|217958228|ref|YP_002336774.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|229137442|ref|ZP_04266053.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
 gi|217066252|gb|ACJ80502.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|228646000|gb|EEL02223.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
          Length = 214

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 30/185 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      V SF++G V+ +        F +  G      + LPLL I  F  F LP 
Sbjct: 21  ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              + LK ++                       ++ +AL+ + AA I+EIVRSGL+++ +
Sbjct: 81  ---VGLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+    
Sbjct: 117 GQIEAARSSGLTYVQALWSIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176

Query: 355 TIINQ 359
            I  Q
Sbjct: 177 IISGQ 181



 Score = 36.6 bits (83), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|116872260|ref|YP_849041.1| glutamine ABC transporter binding and transport protein, putative
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741138|emb|CAK20258.1| glutamine ABC transporter binding and transport protein, putative
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 480

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|328479075|gb|EGF48533.1| amino acid ABC transporter permease [Lactobacillus rhamnosus MTCC
           5462]
          Length = 224

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 75/120 (62%), Gaps = 2/120 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  YT+AFIAE VR+G+ AVP GQME A ++G+T+ +A   ++ PQA + +IPPL +Q
Sbjct: 90  IGLLIYTSAFIAETVRAGIEAVPSGQMEGARSIGMTYTQAMTQIIFPQAFKIVIPPLGNQ 149

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++NL+KNSS LA   GF DL+  G  I   T    +  LI    YL L++ ++  M  L 
Sbjct: 150 FINLVKNSSVLAFVAGF-DLMYQGKLIAATTFSTFDTYLIVGIFYLILTMPLSYLMRYLE 208


>gi|113866502|ref|YP_724991.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525278|emb|CAJ91623.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 242

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 79/129 (61%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + +F++  + L  +TAA + E VRSG+ ++ RGQ  A +A+G T  +  R VLLP A R 
Sbjct: 104 AQQFLAAMLCLGTFTAARVCEQVRSGINSLARGQKNAGLAMGFTLPQTYRHVLLPMAFRV 163

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PPLTS++LN+ KNS++A  +G  +L + G  +++ T +  E  +    +Y  +++ + 
Sbjct: 164 IVPPLTSEFLNIFKNSAVASTIGLLELAAQGRQLVDYTARPYESFIAVTLMYALINVTVM 223

Query: 383 LFMNRLNAK 391
           L M  + A+
Sbjct: 224 LIMRWVEAR 232



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   ++ G   T  L  S  + A +IG+++G  R   NK +A I   YVE+FRNIP
Sbjct: 16  QNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVLRTVPNKWLAGIAATYVEIFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y     +LP
Sbjct: 76  LLVQLFIWYFVAPELLP 92


>gi|239813838|ref|YP_002942748.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239800415|gb|ACS17482.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 244

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/134 (40%), Positives = 79/134 (58%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ + +AL  +T+A IAE VRSG+ A+P+GQ  A +A+G T  +  R V+LP A R I
Sbjct: 100 PSFVLVVLALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTPQYYRYVILPMAYRII 159

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPLTS+ +N+ KNSS+A AV   +L         +T + IE+ L        L ++ A 
Sbjct: 160 IPPLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYL----AVTGLYVISAF 215

Query: 384 FMNRLNAKIALKEK 397
            +NR+ A I  K +
Sbjct: 216 AINRIMAYIEKKTR 229


>gi|150020367|ref|YP_001305721.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Thermosipho melanesiensis BI429]
 gi|149792888|gb|ABR30336.1| Ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Thermosipho melanesiensis BI429]
          Length = 216

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 26/201 (12%)

Query: 188 KIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPL---LYISTFLIFGLPTLVLIALKY 242
           K+  FS ++G+VL  F    RLS+       KA+ +   +Y+    + G P LV I++ Y
Sbjct: 23  KLTFFSVLIGLVLGTFIGMGRLSKI------KAINIPSTVYVE--FLRGTPLLVQISIVY 74

Query: 243 QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              F  P LG Q            + +  +AL   + A+IAEIVR+G+ ++P+GQ EAA 
Sbjct: 75  ---FGLPQLGIQLE---------AYPAAIVALGLNSGAYIAEIVRAGIQSIPKGQYEAAR 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+TH +  R ++LPQA ++I+P L ++++ L K+SSLA  +G  +L+  G  +I +T 
Sbjct: 123 SLGMTHFQTMRYIILPQAFKNILPALGNEFITLTKDSSLASIIGVTELMRRGQFVITRTF 182

Query: 362 QAIEIILIWMFIYLSLSIMIA 382
           Q   I      IY  ++  I+
Sbjct: 183 QTFSIYFGIALIYFVMTFTIS 203



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G  +T  L F  ++   ++GT +G GRLS  K +     VYVE  R  P LV I  +
Sbjct: 14  LLLGAWDTLKLTFFSVLIGLVLGTFIGMGRLSKIKAINIPSTVYVEFLRGTPLLVQISIV 73

Query: 149 Y 149
           Y
Sbjct: 74  Y 74


>gi|62390793|ref|YP_226195.1| glutamate permease [Corynebacterium glutamicum ATCC 13032]
 gi|41326131|emb|CAF20294.1| GLUTAMATE PERMEASE [Corynebacterium glutamicum ATCC 13032]
          Length = 315

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 11/166 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  VFS +L +V+   A  L R    +  +    + I TF    +P L+L+   YQ+   
Sbjct: 77  KSAVFSVILALVMGT-ALGLGRISEIRILRWFCAVIIETFR--AIPVLILMIFAYQM--- 130

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                Q+N +  S ++  F ++   L+ Y  + IAEI+RSG+ ++P+GQ EAAIALG++ 
Sbjct: 131 ---FAQYNIVPSSQLA--FAAVVFGLTMYNGSVIAEILRSGIASLPKGQKEAAIALGMSS 185

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R+ T  +LLPQA+ +++P L SQ +  LK+S+L   +G+ ++V  G
Sbjct: 186 RQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQIGYIEVVRSG 231



 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+ +  ++ T IL G   T   A   +I A ++GT +G GR+S  +++ W C V +E FR
Sbjct: 57  PFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIETFR 116

Query: 138 NIPPLVVIFFLYK 150
            IP L+++ F Y+
Sbjct: 117 AIPVLILMIFAYQ 129


>gi|259909118|ref|YP_002649474.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae
           Ep1/96]
 gi|224964740|emb|CAX56257.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae
           Ep1/96]
 gi|283479146|emb|CAY75062.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia pyrifoliae DSM 12163]
          Length = 245

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%)

Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           S + P    F    + L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLL
Sbjct: 102 SEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A R I+PP+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++
Sbjct: 162 PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIA 221

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++ +I L M  +  K+ L
Sbjct: 222 INTVIMLLMGLVERKVRL 239



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 39/77 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  ++    I A  +G+  G  R    +L++ +   YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTIAVSVCAWIIALFVGSFFGILRTVPGRLLSSLGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFIWYLVVPELLP 93


>gi|330466434|ref|YP_004404177.1| binding-protein-dependent transporter inner membrane component
           [Verrucosispora maris AB-18-032]
 gi|328809405|gb|AEB43577.1| binding-protein-dependent transporter inner membrane component
           [Verrucosispora maris AB-18-032]
          Length = 224

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 5/150 (3%)

Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           G F  +G S     F+++Y    I LS YTAAF+ E VRSG+  VP GQ EAA A+GLT 
Sbjct: 75  GLFVTLGLSLSQDLFLNIYWLGVIGLSTYTAAFVCEAVRSGINTVPTGQAEAARAIGLTF 134

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEI 366
            +  R+V+LPQA RS+I P  S  + L KN+++   +G  +  SV   +IN  G A I I
Sbjct: 135 AQTLRIVVLPQAARSVIAPFGSILIALCKNATIVGTIGLMESSSVMKDLINFNGDAVIPI 194

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            L++   + ++ I    F   L  ++A+K 
Sbjct: 195 FLVFAGTFAAILIPTGYFFGWLANRLAVKR 224


>gi|297192145|ref|ZP_06909543.1| polar amino acid ABC transporter [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197720209|gb|EDY64117.1| polar amino acid ABC transporter [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 326

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 12/211 (5%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           KI V+S V+G+VL   L   RLS +       ++   YI  +   G P LV I L + L 
Sbjct: 89  KITVYSMVIGVVLGAILAVMRLSPN---PVLSSVAWGYI--WFFRGTPVLVQILLWFNLS 143

Query: 246 --FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F    LG       + V   F++  +AL    AA++AEI R+G+ +V  GQ EAA AL
Sbjct: 144 LVFQYLDLGFIYRDEMNQVMTPFVAALLALGLNEAAYMAEICRAGIQSVDSGQTEAAHAL 203

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +  R ++LPQAMR IIPP  ++++N+LK SSLA A+G+ +L   G    ++T   
Sbjct: 204 GMKGGRTMRRIVLPQAMRVIIPPTGNEFINMLKTSSLAFAIGYGELFLRGREFGSRTLAI 263

Query: 364 IEIILIWMFIYLSLSIMIAL---FMNRLNAK 391
           +E  ++    YL+L+ + ++   ++ R  A+
Sbjct: 264 MEGYIVISLWYLALTTVFSIGQYYLERYYAR 294


>gi|313902717|ref|ZP_07836115.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467014|gb|EFR62530.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 225

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 20/166 (12%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKT-GKALPLLYISTFLIFGLPTLVLIALKYQL 244
           K+ V S VLG+ + L     +LSR    +T G A       T++I G P LV I L Y  
Sbjct: 31  KLTVVSIVLGLAIGLLVALMKLSRFGVLRTIGSAY------TWIIRGTPLLVQIYLIY-- 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F       V   F +   ALS  + A++AEI+R+G+ ++PRGQMEAA +LG
Sbjct: 83  ---------FGLSDYGIVLEAFPAGVAALSINSGAYLAEIIRAGIESIPRGQMEAARSLG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +++ +A R V+LPQA R +IPP+ ++++ LLK+SSL   +G  +++
Sbjct: 134 MSYGQAMRRVILPQAYRRMIPPMVNEFVILLKDSSLVSVIGLQEIM 179


>gi|171321020|ref|ZP_02910007.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171093717|gb|EDT38861.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 246

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 75/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPTGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFVWYLVVPELLP 94


>gi|229154344|ref|ZP_04282464.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 4342]
 gi|228629168|gb|EEK85875.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 4342]
          Length = 214

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 30/185 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      V SF++G V+ +        F +  G      + LPLL I  F  F LP 
Sbjct: 21  ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              + LK ++                       ++ +AL+ + AA I+EIVRSGL+++ +
Sbjct: 81  ---VGLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+    
Sbjct: 117 GQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176

Query: 355 TIINQ 359
            I  Q
Sbjct: 177 IISGQ 181



 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|150398297|ref|YP_001328764.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150029812|gb|ABR61929.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 274

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 118/224 (52%), Gaps = 38/224 (16%)

Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIAL 240
           FV + +LG+ ++L A  LS H        F+ +  + +P+L +  ++ F G P LV  A 
Sbjct: 62  FVLATLLGLGVALMA--LSGHVALRQIARFYTEVIRGVPILVLLFYIAFVGAPALVTAA- 118

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVRSG 288
                         NF+    +S  +M  +            IAL    +AFIAE+ R+G
Sbjct: 119 --------------NFVAAPLISAGWMEAFVVRDVSLMWRAIIALMIGYSAFIAEVFRAG 164

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V +GQ+EAA ALGL+  +  RLV+ PQA+R I+PPL + ++ ++K+SSL   +G AD
Sbjct: 165 IQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVAD 224

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  +G    + + +  E   I  ++YL L+I ++L +  +  ++
Sbjct: 225 VTQMGKIYASGSFRFFETYSIVAYVYLVLTIGLSLALRAVEQRL 268


>gi|293393702|ref|ZP_06638011.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
 gi|291423824|gb|EFE97044.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
          Length = 252

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/108 (47%), Positives = 71/108 (65%), Gaps = 2/108 (1%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF ++  +  S EF++    L+ Y+AAFIAE VRSG+  V  GQ +AA ALGLT  +A R
Sbjct: 106 QFGWL--AWPSFEFLAGCCGLTLYSAAFIAEEVRSGIRGVAVGQKQAANALGLTGWQAMR 163

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            V+LPQA+   +PPL  QY+NL+KNSSL +A+G A+L      +  +T
Sbjct: 164 HVVLPQALTIALPPLLGQYMNLIKNSSLTMAIGVAELSYASRQVETET 211



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 12/106 (11%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111
           M+    ++G+ FL+E            +  +  Y   +  GF+ T WL+    + AT++G
Sbjct: 1   MDAERATMGMQFLAE------------WLLEPQYLGWLWHGFLLTLWLSACAGLAATLLG 48

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             + A R S   L+  +   Y  +FRN P LV +FF Y +   +LP
Sbjct: 49  LAIAALRDSPLPLLRGLAVAYSALFRNTPLLVQLFFWYFAAGQILP 94


>gi|294676009|ref|YP_003576624.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294474829|gb|ADE84217.1| amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 262

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 115/223 (51%), Gaps = 14/223 (6%)

Query: 178 FPTLTMDTNAKIFV----FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           F TL+      IFV    F   L + L L    LSRH   +      L    T +I G+P
Sbjct: 37  FATLSKGIGVTIFVTLVAFLGALVLGLLLAVASLSRHLIWRQ-----LARFYTEVIRGVP 91

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAFIAEIVRSGL 289
            +VL+ L         ++  +N +G   +S    P      +AL    AAF+AE+ R+GL
Sbjct: 92  IIVLL-LYVAFALVPALVAGWNALGLPELSVRDFPLLARAVLALILAYAAFLAEVFRAGL 150

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           I+V RGQ+EAA ALGL      RL++ PQA R+++PPL + ++ ++K+SSL   +G AD+
Sbjct: 151 ISVERGQIEAAKALGLGGWLRFRLIVFPQAFRTVLPPLGNDFVAMVKDSSLVSVLGVADI 210

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G        +  E   +   IYL++++ ++L + +L A +
Sbjct: 211 TQLGKVTAAGNFRYFETYNVVALIYLAMTVTLSLLLRKLEAHL 253


>gi|326318772|ref|YP_004236444.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375608|gb|ADX47877.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 243

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 4/132 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + +AL  +T+A IAE VRSG+ A+PRGQ  A +ALG T  +  R VLLP A R IIP
Sbjct: 102 FILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTAQYYRYVLLPMAFRIIIP 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ +N+ KNSS+A AV   +L         +T + IEI L        L ++ A  +
Sbjct: 162 PLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEIYL----AVTGLYVISAFAI 217

Query: 386 NRLNAKIALKEK 397
           NR+ A I  + +
Sbjct: 218 NRIMAFIEKRAR 229



 Score = 39.7 bits (91), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVF 136
           P     +Y   +L  +  T  +A   ++ A + G+++G  R L  NK +      +VE+F
Sbjct: 14  PGGEYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTIRTLPDNKFLVGFGNAWVELF 73

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHS-----IVLPFGMFLNNR 174
           RNIP LV IF  Y  V ++ P+         +VL  G F + R
Sbjct: 74  RNIPLLVQIFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSAR 116


>gi|206580088|ref|YP_002238062.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935047|ref|YP_003439106.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290509109|ref|ZP_06548480.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
 gi|206569146|gb|ACI10922.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288889756|gb|ADC58074.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289778503|gb|EFD86500.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
          Length = 254

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 77/131 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ +GQMEA+ ALG+   K  R V+LPQA R I+P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRILP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ ++A  +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLV 241

Query: 386 NRLNAKIALKE 396
           NRL  +    +
Sbjct: 242 NRLEKRFGKSD 252


>gi|152970647|ref|YP_001335756.1| amino acid ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238895146|ref|YP_002919881.1| amino acid ABC transport system inner membrane component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|330012781|ref|ZP_08307485.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955496|gb|ABR77526.1| amino acid ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238547463|dbj|BAH63814.1| amino acid ABC transport system inner membrane component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328533704|gb|EGF60398.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 254

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ +GQMEA+ ALG+   K  R V+LPQA R I+P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRILP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ ++A  +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLV 241

Query: 386 NRLNAK 391
           NRL  +
Sbjct: 242 NRLEKR 247


>gi|300725185|ref|YP_003714513.1| putative glutamate/aspartate ABC transporter membrane protein
           [Xenorhabdus nematophila ATCC 19061]
 gi|297631730|emb|CBJ92449.1| putative glutamate/aspartate transport protein (ABC superfamily,
           membrane) [Xenorhabdus nematophila ATCC 19061]
          Length = 245

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 75/113 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +I L+ Y+A F+AE +R+G+  V RGQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 113 EFLAGFIGLTLYSAPFVAEELRAGIQGVGRGQKYAAHALGLTGWQSMRHVVLPQALKIAM 172

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           PPL  QY+N++KNSSL +A+G A+L      +  +T +  E   +   +Y+++
Sbjct: 173 PPLLGQYMNIVKNSSLTMAIGVAELSYASRQVETETLKTFEAFGVATILYIAI 225



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q I  +     Y   +  GF+ T WL+   ++ +T++G ++ A R S  K + W+  +Y
Sbjct: 3   EQFITEHLLAPEYLQWLWQGFLLTLWLSACAIVSSTLLGFVIAAARDSQIKPLRWLVTIY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP 157
             VFRN P LV +FF Y +    LP
Sbjct: 63  TTVFRNTPLLVQLFFWYFASGQTLP 87


>gi|197286728|ref|YP_002152600.1| amino acid ABC transporter permease [Proteus mirabilis HI4320]
 gi|227355082|ref|ZP_03839493.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Proteus mirabilis ATCC 29906]
 gi|194684215|emb|CAR45713.1| putative amino acid ABC transporter, permease protein [Proteus
           mirabilis HI4320]
 gi|227164869|gb|EEI49716.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Proteus mirabilis ATCC 29906]
          Length = 245

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 65/90 (72%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S  S EF++  I L+ Y+  FIA+ +R+G+  V +GQ  AA+ALGLTH ++ R V+LPQA
Sbjct: 108 SWPSFEFLAGIIGLTFYSVPFIAQELRAGIQGVRQGQKYAALALGLTHWQSMRYVILPQA 167

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            R  +PPL  QY+N++KNSSL +A+G A+L
Sbjct: 168 FRIALPPLLGQYMNIIKNSSLTMAIGVAEL 197



 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y  +  Y + +  GF+ T  ++F  +I AT++G L+ A   S    + W   +Y  +FRN
Sbjct: 9   YLLEPHYLSWLWQGFLITLLISFWTIIIATLLGFLLSAAYDSHIAPLRWCAAIYTSLFRN 68

Query: 139 IPPLVVIFFLYKSVLSVLP 157
            P LV +FF Y +   +LP
Sbjct: 69  TPLLVQLFFWYFASGELLP 87


>gi|238750581|ref|ZP_04612081.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia rohdei ATCC 43380]
 gi|238711229|gb|EEQ03447.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia rohdei ATCC 43380]
          Length = 239

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 80/133 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++P
Sbjct: 106 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 165

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  LI   IY  ++ +++L +
Sbjct: 166 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLIISLIYWVITFLLSLLV 225

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 226 RHMEKRFGKSDSR 238


>gi|170683230|ref|YP_001742770.1| glutamate/aspartate ABC transporter permease GltK [Escherichia coli
           SMS-3-5]
 gi|170520948|gb|ACB19126.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli SMS-3-5]
          Length = 224

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 80/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+ H ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMNHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|255318802|ref|ZP_05360028.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter radioresistens SK82]
 gi|255304058|gb|EET83249.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter radioresistens SK82]
          Length = 247

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 81/133 (60%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S+ +   +S  + L  +TAA + E VR+G+ A+PRGQ+ A  A+G +  +  R V+LPQ+
Sbjct: 105 SSNASALISASVGLGLFTAARVCEQVRTGIEALPRGQINAGYAMGFSTSQLYRYVILPQS 164

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R+I+PPL+S+  N +KN+S+A  VG A+++S   TI   T   IEI      I++ +++
Sbjct: 165 FRTILPPLSSELTNCVKNTSVASLVGVAEIISQMKTISEYTQNTIEIYTFVTLIFIVINV 224

Query: 380 MIALFMNRLNAKI 392
            + L M  L  ++
Sbjct: 225 CLILLMTLLEHRL 237



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 40/78 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           DS+Y   +L+G      +A      A ++G+++G  R   +K    I   YV +FRN+P 
Sbjct: 18  DSTYLQWVLIGLGWLLVIALVAWSIAMVLGSILGIMRTLPSKTARTIGTAYVTLFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIP 159
           L+ +F  +  V + LP P
Sbjct: 78  LIQLFIWFYVVPNFLPGP 95


>gi|288575077|ref|ZP_06393434.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570818|gb|EFC92375.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 520

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 8/135 (5%)

Query: 229 IFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFI 281
           +FG   L +++  Y ++    PVL Q  F F G    G  + P F +  I L    AA+ 
Sbjct: 329 VFGPAPLAVLSTWYVEIIRGTPVLIQLFFIFYGLPNVGIKLDP-FTAGVIGLGLNYAAYE 387

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R+GL+AVP GQMEAA+ LG+T R+A R V++PQA+R ++PP+T+ +++LLK+SSL 
Sbjct: 388 AEIYRAGLMAVPAGQMEAALGLGMTRREALRHVVVPQAVRMVLPPVTNDFISLLKDSSLV 447

Query: 342 VAVGFADLVSVGGTI 356
             +   DL    G I
Sbjct: 448 SVITLVDLTKAYGQI 462


>gi|94987195|ref|YP_595128.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731444|emb|CAJ54807.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 230

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 12/181 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + L ++Y+   +I G P +VL+     L+F  P+    +      + P +  + IA+   
Sbjct: 54  RTLAVIYVE--IIRGTPLIVLVMF---LYFALPLALDIH------IPPNWAGV-IAIGVN 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR  +I++  GQMEAA + GLTH +A   ++ PQA R +IPPLT+Q +  LK
Sbjct: 102 SGAYIAEIVRGSIISISHGQMEAARSTGLTHAQAMLYIIWPQAFRRMIPPLTNQCIISLK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SL V +G  +L   G  II+   +A E+ L     YL +++ I+  +  L  ++ L  
Sbjct: 162 DTSLLVVIGVGELTRQGQEIISVNFRAFEVWLTVAIFYLIMTLSISALLKYLERRLVLPG 221

Query: 397 K 397
           +
Sbjct: 222 R 222


>gi|149021568|ref|ZP_01835623.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|147930264|gb|EDK81249.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
          Length = 225

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I
Sbjct: 91  PFYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAVGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLPF 167
               LP I DH I++PF
Sbjct: 80  ----LPLISDHIIMIPF 92


>gi|297531646|ref|YP_003672921.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. C56-T3]
 gi|297254898|gb|ADI28344.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. C56-T3]
          Length = 218

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 82/125 (65%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +SL ++LS  +AA++AEI R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP
Sbjct: 90  VSLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             ++++ L+K+SSL + +   +++  G     +  +  E  L   FIYL L++ ++   +
Sbjct: 150 FANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSH 209

Query: 387 RLNAK 391
            L  K
Sbjct: 210 YLERK 214



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA     G + T  ++ +G+I   I+G  +G G++S N+LV      Y+  FR  P +V
Sbjct: 10  EYAPYFFQGLLATIGVSLAGIIFGLILGLFIGLGKMSTNRLVRLPFSWYINFFRGTPLVV 69

Query: 144 VIFFLYKSVL 153
            I  ++  V+
Sbjct: 70  QILLVHFGVM 79


>gi|170691225|ref|ZP_02882390.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143430|gb|EDT11593.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 222

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 84/129 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +
Sbjct: 87  PAFLCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+ +   
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYLAIALVYLVLTQVTNF 206

Query: 384 FMNRLNAKI 392
            ++R+  ++
Sbjct: 207 ALHRVERRL 215


>gi|119963944|ref|YP_948499.1| glutamate permease [Arthrobacter aurescens TC1]
 gi|119950803|gb|ABM09714.1| Glutamate permease [Arthrobacter aurescens TC1]
          Length = 216

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 1/127 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS YTAAFIAE VRSG+ +VP GQ EAA ++G+T  +    ++LPQA+R++IPPL + 
Sbjct: 90  IALSSYTAAFIAEAVRSGVNSVPVGQAEAARSVGMTFTQVLGFIVLPQAVRTVIPPLINI 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + L+KNSS+A A    +L   G  + N  G Q + I+L   F YL +++ + L  + + 
Sbjct: 150 LIALVKNSSVAGAFFVLELFGYGRQLSNDYGNQVLWILLGVAFFYLLITVPLGLLAHFVE 209

Query: 390 AKIALKE 396
            K+A+  
Sbjct: 210 RKVAIAR 216



 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T +L+    I A I+GTL+ A R+S    +      YVEV RN  PL +IFF    
Sbjct: 14  GFLRTLYLSVISGIIALIVGTLLAAMRVSPVAALRGFSMFYVEVARNT-PLTIIFFFAAI 72

Query: 152 VL 153
           VL
Sbjct: 73  VL 74


>gi|313890243|ref|ZP_07823877.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121348|gb|EFR44453.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 234

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 80/116 (68%), Gaps = 8/116 (6%)

Query: 243 QLHFDKPVLGQFNFI--GGSTVSPE---FMSLYIALSC---YTAAFIAEIVRSGLIAVPR 294
           +L+ + P+L Q  F+  G + +S     F S + A+ C   Y  A+IAE++RSG+ AVP+
Sbjct: 71  ELYQNTPLLVQLVFVYYGLAIISRGHIMFSSFFTAILCVGVYHGAYIAEVIRSGIEAVPK 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           GQ+EA+++ G T+ +   L++LPQA+R+I+PP+T+Q +NL+KN+S+   +  AD++
Sbjct: 131 GQIEASLSQGFTYEQTMSLIVLPQAVRTILPPMTNQVVNLIKNTSIVAIISGADIM 186


>gi|163853362|ref|YP_001641405.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium extorquens PA1]
 gi|240140778|ref|YP_002965258.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens AM1]
 gi|254563288|ref|YP_003070383.1| glutamate/aspartate ABC transporter permease [Methylobacterium
           extorquens DM4]
 gi|163664967|gb|ABY32334.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium extorquens PA1]
 gi|240010755|gb|ACS41981.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens AM1]
 gi|254270566|emb|CAX26569.1| glutamate/aspartate transport protein, ABC superfamily, permease
           component [Methylobacterium extorquens DM4]
          Length = 230

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 110/211 (52%), Gaps = 12/211 (5%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYIS---------TFLIFGLPTLVLIALKYQLHFD 247
           G+V +L  T L+       G  L LL +S          F +  + +L L+ + +  +F 
Sbjct: 21  GMVFTLTLTALAASGGIVLGTGLALLRLSGVPGLTHAAKFYVELMRSLPLVLVIFWFYFL 80

Query: 248 KPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            P LG +  IG  T      F S  +  + + AA+ +EIVR+G+ ++P+GQ  AA ALG+
Sbjct: 81  VPYLGAWA-IGADTPIQVGAFASALVTFTLFEAAYFSEIVRAGIQSIPKGQSAAARALGM 139

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           ++ +  RLV+LPQA R+++P L +Q + L +++SL   +   D +     +  + G+ +E
Sbjct: 140 SYAQVMRLVVLPQAFRNMVPLLLTQTIVLFQDTSLVYVLSLTDFLGAASKVAQRDGRLVE 199

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + L    +Y ++    +L + RL A+ A+  
Sbjct: 200 MYLFAALVYFAVCFAASLLVRRLQARTAIAR 230


>gi|282882686|ref|ZP_06291296.1| arginine transport system permease protein ArtQ [Peptoniphilus
           lacrimalis 315-B]
 gi|300814297|ref|ZP_07094569.1| putative arginine ABC transporter, permease protein ArtQ
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|281297499|gb|EFA89985.1| arginine transport system permease protein ArtQ [Peptoniphilus
           lacrimalis 315-B]
 gi|300511564|gb|EFK38792.1| putative arginine ABC transporter, permease protein ArtQ
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 225

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 81/123 (65%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +++S  +AA++AEI+RSG+ +V  GQMEAA +LGLT  +A R ++LPQA+++I+P L ++
Sbjct: 101 LSISLNSAAYVAEIIRSGINSVDNGQMEAARSLGLTRSQAMRKIILPQAVKNILPALVNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL----SLSIMIALFMN 386
           ++ L+K SS+   VG A+L+  G +I + T QA+   +    IY     SLS  + +   
Sbjct: 161 FITLIKESSIVYTVGVAELMYSGKSIASATYQAVRPFIYAAIIYFIMTYSLSKALQVLER 220

Query: 387 RLN 389
           RL+
Sbjct: 221 RLS 223



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  L+  G+I    IG ++   ++S NKL+ +I   Y+E+ R  P LV I  
Sbjct: 17  AYLKGAGVTIKLSLIGVILGLTIGIVLALMKISKNKLLKFIASAYIEIVRGTPMLVQIMI 76

Query: 148 LYKSVLSVLP 157
           +Y  +  ++P
Sbjct: 77  VYFGLKKIIP 86


>gi|295677662|ref|YP_003606186.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295437505|gb|ADG16675.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 225

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 79/126 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+T+ ++ RL++LPQA R+++P L
Sbjct: 99  SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMTYGQSMRLIVLPQAFRAMVPLL 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   +  AD       I ++ G  +E++L    +Y  + ++ +  +  
Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGAVYFVICVIASSLVKG 218

Query: 388 LNAKIA 393
           L  K+A
Sbjct: 219 LQKKVA 224


>gi|261420863|ref|YP_003254545.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|319768534|ref|YP_004134035.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. Y412MC52]
 gi|261377320|gb|ACX80063.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|317113400|gb|ADU95892.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC52]
          Length = 218

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 82/125 (65%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +SL ++LS  +AA++AEI R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP
Sbjct: 90  VSLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             ++++ L+K+SSL + +   +++  G     +  +  E  L   FIYL L++ ++   +
Sbjct: 150 FANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSH 209

Query: 387 RLNAK 391
            L  K
Sbjct: 210 YLERK 214


>gi|296110978|ref|YP_003621359.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832509|gb|ADG40390.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 213

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 77/127 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +AL  YT+AFIAE VR+G+++V  GQME A A GL+  +A + ++LPQA R  +P
Sbjct: 83  FTSGTVALMLYTSAFIAETVRAGILSVDSGQMEGARANGLSFAQAMQHIVLPQAFRISLP 142

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q++NL+KNSS+   VG  DL+  G  +   T       +I    YL +++ ++ +M
Sbjct: 143 SLGNQFINLVKNSSILAFVGGLDLMYQGNMVAANTFDTFSTYIIVAIFYLVITLPLSYYM 202

Query: 386 NRLNAKI 392
             L  K+
Sbjct: 203 QHLEQKL 209



 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T   +   ++ + I+GT     ++   K    I  +YV+VFRNIP L++ FF +
Sbjct: 12  LQGFGYTLLSSLIALVGSMILGTGFAIMQIVPQKWAQKIGNIYVQVFRNIPLLIITFFFF 71


>gi|225870042|ref|YP_002745989.1| amino acid ABC transporter permease protein [Streptococcus equi
           subsp. equi 4047]
 gi|225699446|emb|CAW92946.1| putative amino acid ABC transporter permease protein [Streptococcus
           equi subsp. equi 4047]
          Length = 227

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 121/218 (55%), Gaps = 18/218 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +TM  +A +  F  ++G++++L      +  H K    L  LY+  F   G P +V I +
Sbjct: 19  VTMMISACVVFFGTIIGLLVTLI-----KRSHIKPLSWLVSLYVWIFR--GTPMVVQIMI 71

Query: 241 KYQ-LHF-DKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRG 295
            +  LHF D P+      +G   +  +F  L    I +S  + A+I+EIVR+G+ AVP+G
Sbjct: 72  AFAWLHFNDLPI------VGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA +LG+  + A R V+LPQA ++I+P L ++ + ++K+S+L   +G  +L +   +
Sbjct: 126 QLEAAYSLGIRPKNAMRYVILPQAFKNILPALGNELITIIKDSALLQTIGVMELWNGAQS 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++  T   I  +L   F YL ++ +++  +  L  K+A
Sbjct: 186 VVTATYLPITPLLFAAFYYLMITTILSQLLGCLERKLA 223


>gi|119896732|ref|YP_931945.1| putative glutamine transport permease [Azoarcus sp. BH72]
 gi|119669145|emb|CAL93058.1| putative glutamine transport permease protein [Azoarcus sp. BH72]
          Length = 245

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/125 (43%), Positives = 73/125 (58%), Gaps = 4/125 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  I L  YTAA IAE V+SG+ A+ RGQ  A +ALG T  +  R V LP A R +
Sbjct: 104 PYFVTAVIGLGLYTAARIAEQVKSGINALARGQRFAGLALGFTEWQTYRYVRLPMAYRIV 163

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P LTS+ +N+ KNS++  AVG  +L      II +T Q +EI ++    Y  L    A 
Sbjct: 164 LPALTSEAMNIFKNSAVTYAVGILELYFQYKQIIEKTSQVLEITIVVTLTYFVL----AF 219

Query: 384 FMNRL 388
            MNRL
Sbjct: 220 AMNRL 224



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 7/87 (8%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E D G+        Y   ++ G   T  ++ S +  A ++G+++G  R + +KL+  I  
Sbjct: 13  ETDDGL-------KYIDWVISGMGWTTAVSLSALAIALLVGSVLGVMRTTPSKLLVAIGD 65

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            YV++FRN+P +V +F  +  V  ++P
Sbjct: 66  TYVDIFRNVPLIVQLFMWFFVVPELVP 92


>gi|227872730|ref|ZP_03991055.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227841425|gb|EEJ51730.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 229

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 112/209 (53%), Gaps = 16/209 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDK 248
           F+ V+G+ L  F   + R  +++TGK      I  F   ++ G P ++ + + Y   F  
Sbjct: 33  FALVIGVALG-FIIGMVRSTYDRTGKGKIANGICQFYLTIMRGTPAVIQLMIFYYCIFTS 91

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            +            S  F+ + IA    +AA++AEI+RSG++++P+GQMEA  +LG ++ 
Sbjct: 92  RIF-----------SGVFVGI-IAFGLNSAAYVAEIIRSGIMSIPKGQMEAGRSLGFSYG 139

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R +++PQA+R+++P + ++++ L+K +++A  V   DL   G  + ++T  +   +L
Sbjct: 140 ETMRYIIMPQAVRNVLPAIFNEFIVLIKETAVAGYVAVQDLTKAGDIVRSRTYDSWTPLL 199

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               IYL L++  +    ++      KE+
Sbjct: 200 TVALIYLILTMFFSFLEKKMEEAFQRKER 228


>gi|111023904|ref|YP_706876.1| glutamate transport system permease protein GluD [Rhodococcus
           jostii RHA1]
 gi|110823434|gb|ABG98718.1| probable glutamate transport system permease protein GluD
           [Rhodococcus jostii RHA1]
          Length = 275

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 20/203 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S V G++L+  A R+S     +  + +  +++  F   GLP LVLI   + +    P 
Sbjct: 90  VLSVVFGMILA--AMRMS---DSRLLRGVVRVWVEIF--RGLPLLVLI---FFIFLGAP- 138

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             QF  I      P F +L + +S Y +A ++EI R+G+ ++PRGQ EAA A+G+   + 
Sbjct: 139 --QFGII-----VPTFWALALGISLYNSAVMSEIFRAGIASLPRGQAEAAAAIGMRKTQI 191

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIIL 368
            R++LLPQ +R ++P L SQ + ++K +SL   +G+ +L+  G   +   G   AI + +
Sbjct: 192 FRIILLPQGIRIMLPALISQVVTIVKETSLGFVIGYTELLRSGRVAVEYLGGQYAIPVYV 251

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           +   IYL +++ ++    R++A+
Sbjct: 252 LIAIIYLLMNVGLSKLARRIDAR 274



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 6/85 (7%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D     ++L G + T   A   ++ + + G ++ A R+S ++L+  + RV+VE+FR +P 
Sbjct: 67  DRDLMRSVLKGLLATIQCAIVSIVLSVVFGMILAAMRMSDSRLLRGVVRVWVEIFRGLPL 126

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV+IFF++      L  P   I++P
Sbjct: 127 LVLIFFIF------LGAPQFGIIVP 145


>gi|289422748|ref|ZP_06424588.1| amino acid ABC transporter, permease protein [Peptostreptococcus
           anaerobius 653-L]
 gi|289156927|gb|EFD05552.1| amino acid ABC transporter, permease protein [Peptostreptococcus
           anaerobius 653-L]
          Length = 221

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 113/200 (56%), Gaps = 11/200 (5%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG  + L A  + +  + K    +  +YI   +I   P ++ +A+   ++F  P LG  N
Sbjct: 28  LGFFVGLIAC-IGKISNSKVASIIASIYIE--VIRDTPLMIQLAI---IYFGLPSLG-VN 80

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F     +  EF +   AL+  + A++AEI+RSG+ AV +GQMEA+ +LGL + +A R V+
Sbjct: 81  FPSLFGLPEEFTAGVFALTLNSGAYVAEIMRSGIQAVNKGQMEASRSLGLNYWQAMRYVI 140

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILIWM 371
           +PQA+++I+P L +++++L+K S++   VG  DL     ++ N TG      I   +++ 
Sbjct: 141 VPQAVKNILPALANEFISLIKESAIVSVVGITDLTFFASSVKNSTGDFFGPYIFAAVVYF 200

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            I  +LS ++ L   +++ +
Sbjct: 201 VITFTLSKLVGLLEKKMSTE 220


>gi|16079798|ref|NP_390622.1| glutamine ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310681|ref|ZP_03592528.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221315004|ref|ZP_03596809.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221319925|ref|ZP_03601219.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221324206|ref|ZP_03605500.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|81815748|sp|O34671|GLNM_BACSU RecName: Full=Probable glutamine ABC transporter permease protein
           glnM
 gi|2635190|emb|CAB14686.1| glutamine ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|28375454|emb|CAA93319.1| integral membrane protein [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 216

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 82/127 (64%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL+ YT+AFIAE +R+G+ +V +GQMEAA + G T+ +A   ++LPQA++ +IP
Sbjct: 86  FQAGTVALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLHIILPQAIKIVIP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q+LNL+KNSS+   V   DL+     + + T    ++ +     YL L+I +++ +
Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDVYIFVALFYLVLTIPLSIGV 205

Query: 386 NRLNAKI 392
           N L  ++
Sbjct: 206 NYLEKRL 212



 Score = 36.2 bits (82), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF +T   +   +  + ++G  V   R++  K + W+   YVE  RNIP L++ F  Y
Sbjct: 16  GFYHTLLASVIALAGSFVLGVAVAVMRITVFKPLQWLGTAYVEFIRNIPLLLITFVFY 73


>gi|321312270|ref|YP_004204557.1| glutamine ABC transporter permease [Bacillus subtilis BSn5]
 gi|320018544|gb|ADV93530.1| glutamine ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 216

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 82/127 (64%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL+ YT+AFIAE +R+G+ +V +GQMEAA + G T+ +A   ++LPQA++ +IP
Sbjct: 86  FQAGTVALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLHIILPQAIKIVIP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q+LNL+KNSS+   V   DL+     + + T    ++ +     YL L+I +++ +
Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDVYIFVALFYLVLTIPLSIGV 205

Query: 386 NRLNAKI 392
           N L  ++
Sbjct: 206 NYLEKRL 212



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 31/58 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF +T   +   +  + ++G  V   R++  K + W+  VYVE  RNIP L++ F  Y
Sbjct: 16  GFYHTLLASVIALAGSFVLGVAVAVMRITVFKPLQWLGTVYVEFIRNIPLLLITFVFY 73


>gi|227113890|ref|ZP_03827546.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 247

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 63/85 (74%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++    L+ Y++AFIAE +RSG+  V RGQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 115 EFLAGLAGLTLYSSAFIAEEIRSGVRGVARGQKYAAHALGLTGWQSMRYVVLPQALKIAL 174

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL  QY+N++KNSSL +A+G A+L
Sbjct: 175 PPLLGQYMNIVKNSSLTMAIGVAEL 199



 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  ++ S ++ +T++G L+ A R S  +++  +   Y  +FRN P LV +FF Y  
Sbjct: 24  GFLITLGISLSTIVLSTVLGFLLAAARDSQIRVLRGVVVAYSSLFRNTPLLVQLFFWYFG 83

Query: 152 VLSVLP 157
              + P
Sbjct: 84  AGQLFP 89


>gi|170703107|ref|ZP_02893926.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171321019|ref|ZP_02910006.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|170131986|gb|EDT00495.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171093716|gb|EDT38860.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 225

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 68/108 (62%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQM AA ALG+ +  A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQMNAAFALGMNYAHAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       I ++ G  +E++L
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVL 199



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +  
Sbjct: 19  GAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 78

Query: 152 VLSVL 156
           V  VL
Sbjct: 79  VPQVL 83


>gi|168490506|ref|ZP_02714649.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|183574954|gb|EDT95482.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
          Length = 225

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL+ LPQA R I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221


>gi|21228042|ref|NP_633964.1| glutamine transporter, permease protein [Methanosarcina mazei Go1]
 gi|20906475|gb|AAM31636.1| Glutamine transporter, permease protein [Methanosarcina mazei Go1]
          Length = 231

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 81/125 (64%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  + A+ AEIVR+G+ +V RGQMEAA +LG+T  +A + V++PQA+R IIPPL ++++ 
Sbjct: 106 SINSGAYNAEIVRAGIKSVDRGQMEAARSLGMTEGQAMKEVIMPQAVRLIIPPLGNEFIA 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK+SSL   +   +L   G   +++T  A    +   F+YL+L++ I+  +N +  ++ 
Sbjct: 166 LLKDSSLLAVISVHELSKNGMLYVSKTFAAFPTYISVAFVYLALTMGISRVLNHIERRLG 225

Query: 394 LKEKK 398
           + ++ 
Sbjct: 226 VSDRS 230


>gi|254459832|ref|ZP_05073248.1| ABC-type glutamine transport system, permease component
           [Rhodobacterales bacterium HTCC2083]
 gi|206676421|gb|EDZ40908.1| ABC-type glutamine transport system, permease component
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 255

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 101/193 (52%), Gaps = 18/193 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL    + +  +A+PLL +  ++ +GLP +VL ++   +  D                  
Sbjct: 81  RLPSRIYIEFVRAIPLLPMLFWVFYGLP-VVLKSMGINISIDA----------------- 122

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    I L+   +AF AEI RSG+ ++ +GQ EAA  +GL + +  R V+LPQA+R I+P
Sbjct: 123 FWGAIITLAISDSAFTAEIYRSGIQSIAKGQTEAAKTVGLNYTQTMRYVILPQAIRRILP 182

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++ ++K S+ A  +G  +L      ++    + +EI  + +  YL L ++I+ F+
Sbjct: 183 PLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPLEIYTLLILEYLVLVLIISFFV 242

Query: 386 NRLNAKIALKEKK 398
             L  K+   E +
Sbjct: 243 RWLERKMGSDESR 255


>gi|70733920|ref|YP_257560.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348219|gb|AAY95825.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 320

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 102/170 (60%), Gaps = 7/170 (4%)

Query: 233 PTLVLIALKY-QLHFDKPVLGQ---FNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVR 286
           PTL  ++  Y +L    P+L Q   F F  G+   +S EF  +  ALS +T A++AEIVR
Sbjct: 152 PTLRDLSTIYVELVRGTPLLVQIFIFYFFIGTVLNLSREFAGI-AALSLFTGAYVAEIVR 210

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ EAA +LGL+  ++ R V+LPQA + ++PPL  Q+++L+K++SL   +  
Sbjct: 211 AGVQSIARGQNEAARSLGLSAGQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAI 270

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +L+  G  +I  +    EI+     +YL +++ ++   +RL  ++A  +
Sbjct: 271 TELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKMASRLERRLAQSD 320


>gi|237741768|ref|ZP_04572249.1| amino acid transport system permease [Fusobacterium sp. 4_1_13]
 gi|256845096|ref|ZP_05550554.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Fusobacterium sp. 3_1_36A2]
 gi|294785616|ref|ZP_06750904.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium sp. 3_1_27]
 gi|229429416|gb|EEO39628.1| amino acid transport system permease [Fusobacterium sp. 4_1_13]
 gi|256718655|gb|EEU32210.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Fusobacterium sp. 3_1_36A2]
 gi|294487330|gb|EFG34692.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium sp. 3_1_27]
          Length = 236

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 87/147 (59%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQMEA  ALGL++ +
Sbjct: 90  ILANLIFVGALRETPILLIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA+++I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 150 TMRKIIVPQAIKNILPALVSEFITLLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +   FM ++   + + +
Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|302542601|ref|ZP_07294943.1| ABC-type amino acid transport system, permease component
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302460219|gb|EFL23312.1| ABC-type amino acid transport system, permease component
           [Streptomyces himastatinicus ATCC 53653]
          Length = 312

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 3/117 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI R+G+ +V  GQ EAA ALG++H K  R V+LPQAMR I+PP  ++++N+LK 
Sbjct: 166 AAYMAEICRAGIQSVDEGQTEAAQALGMSHAKTLRRVVLPQAMRVIVPPTGNEFINMLKT 225

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           +SL +AV + DL+     +   +G   E++ +   W  I  S+  +   ++ R  A+
Sbjct: 226 TSLVIAVQYWDLLQATSEVGQNSGATAEMLFLAAAWYLILTSVLSVGQYYLERYYAR 282


>gi|307130486|ref|YP_003882502.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306528015|gb|ADM97945.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
          Length = 237

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 9/182 (4%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I L L   RL+ H   +    L   YIS      +PTL+ + + Y   F  P L   +  
Sbjct: 44  IALLLLVIRLTEH---RVATRLVAAYISYHR--NVPTLIQLMMWY---FAIPTLLPESVQ 95

Query: 258 GG-STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           G  +  + EF+    AL    AA+ +E +RSGL A+P GQ EAA ALG+++ +A R V+L
Sbjct: 96  GWINAFNAEFLFSMFALGLCQAAYFSEDIRSGLRAIPDGQNEAARALGMSYMRAMREVIL 155

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R+ +P L +  + L KN+SLA+ +G A+L  V   I NQT    E  +I    YL+
Sbjct: 156 PQGIRNALPALINHTVLLFKNTSLAMVIGVAELTYVTRDIENQTFHTFEAYVIGTLGYLA 215

Query: 377 LS 378
            S
Sbjct: 216 FS 217


>gi|304395667|ref|ZP_07377550.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304356961|gb|EFM21325.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 225

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+I++ RGQ  AA+ALG+T  +A +L++LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIISISRGQGNAALALGMTQWQAMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGLVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  K
Sbjct: 216 VSYLKRK 222



 Score = 43.1 bits (100), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V TF +  + ++   + GTL+   RLS  K ++W  ++YV +FR++P ++V+ + 
Sbjct: 16  LLNGLVITFKITITAVVFGILWGTLLAVMRLSTFKPISWFAKIYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  V S L
Sbjct: 76  YLVVPSFL 83


>gi|157368267|ref|YP_001476256.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320031|gb|ABV39128.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 237

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 66/96 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +  L+ Y++AFIAE +RSG+  V  GQ  AA ALGLT  +A R V+LPQA++  +
Sbjct: 105 EFLAGFFGLTLYSSAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAM 164

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSL +A+G A+L      +  +T
Sbjct: 165 PPLLGQYMNVIKNSSLTMAIGVAELSYASRQVETET 200



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 41/74 (55%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y + +  GF+ T WL+    + AT++G L+ A R S  + + W+   Y  +FRN P LV
Sbjct: 10  EYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMRDSRLRALRWLAVGYSSLFRNTPLLV 69

Query: 144 VIFFLYKSVLSVLP 157
            +FF Y +   +LP
Sbjct: 70  QLFFWYFAAGQILP 83


>gi|238897254|ref|YP_002922931.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465009|gb|ACQ66783.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 247

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 80/133 (60%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S EF+S  I L+ Y++AFIAE  R+G+  V  GQ  AA ALGLTH ++ + V+ PQA++ 
Sbjct: 113 SFEFLSGLIGLTLYSSAFIAEEFRAGIAGVGLGQKNAAQALGLTHWQSMKYVIFPQALKI 172

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +PPL  QY+ ++KNSSL +A+G A+L      +  +T +  +   +  F+Y+ L  +I 
Sbjct: 173 ALPPLLGQYMYIIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATFLYILLIALIE 232

Query: 383 LFMNRLNAKIALK 395
            +    + ++  K
Sbjct: 233 AWNTWHHQRVLRK 245



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 38/76 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D+ Y   +  GF+ T +++   +I +T++G  +   R S  K    +   Y  +FRN P 
Sbjct: 14  DTKYIIWLWDGFLITLYISVCTVIFSTLLGIFLAVARESDFKAQRVMVTCYCMLFRNTPL 73

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +FF Y     +LP
Sbjct: 74  LVQLFFWYFGSGQILP 89


>gi|148975203|ref|ZP_01812127.1| putative amino acid ABC transporter, permease protein [Vibrionales
           bacterium SWAT-3]
 gi|145965127|gb|EDK30377.1| putative amino acid ABC transporter, permease protein [Vibrionales
           bacterium SWAT-3]
          Length = 253

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 23/178 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++P+L +  ++ +G+PTL+ ++L    HF   V                    IAL+  
Sbjct: 96  RSIPVLVLLLWVYYGMPTLLDVSLN---HFWAGV--------------------IALTIA 132

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF+AE+ R G+ A+ RGQ EAA +LGLT+ +  RLV+LP A R I+PPL +Q++ +LK
Sbjct: 133 ESAFMAEVFRGGIQAINRGQHEAAESLGLTYWQKMRLVILPLAFRQILPPLGNQFVYILK 192

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSL   +G +DL      ++      +EI    +  YL L ++++  +  L  +IA+
Sbjct: 193 MSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILVVSQAVRWLEKRIAI 250



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 42/70 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF  T  ++   M  A  +G LV    LS++ ++  I R+YVEV R+IP LV++ ++
Sbjct: 48  LMAGFSETIQVSLLSMFFAMALGLLVAFPALSSSPILRGINRLYVEVMRSIPVLVLLLWV 107

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 108 YYGMPTLLDV 117


>gi|302542074|ref|ZP_07294416.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302459692|gb|EFL22785.1| glutamate permease [Streptomyces himastatinicus ATCC 53653]
          Length = 215

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 84/135 (62%), Gaps = 9/135 (6%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+ Q  F G S     F+   +AL CYT+ F+ E VRSG+  VP GQ EAA +LG++  +
Sbjct: 73  VVPQIFFPGTS----PFVLAMVALGCYTSTFVCEAVRSGINTVPLGQAEAARSLGMSFAQ 128

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RL++LPQA R++IPP++S ++ L KNS++A A    +L +V   +++  G AI     
Sbjct: 129 TLRLIVLPQATRTVIPPMSSIFIALTKNSAIAGAFSNTELFNV-SKLLSDKGFAIG---- 183

Query: 370 WMFIYLSLSIMIALF 384
           W+F++++L  ++  F
Sbjct: 184 WIFLWIALCYLVITF 198


>gi|149181553|ref|ZP_01860048.1| ABC transporter (permease) [Bacillus sp. SG-1]
 gi|148850803|gb|EDL64958.1| ABC transporter (permease) [Bacillus sp. SG-1]
          Length = 219

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 17/206 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +  F++G VLSLF  ++ R    K  K     Y S F   G P ++ + L Y   F  P 
Sbjct: 31  IVGFIIGTVLSLF--KIGRI---KVLKWFADAYTSIFR--GTPLILQLMLIY---FATPQ 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  F+        P F++  +A    + A+I+EI+R+G+ AV +GQ EAA ALG+++R  
Sbjct: 81  LTGFDI-------PPFLAGMLAFGLNSGAYISEIIRAGIQAVDKGQQEAAEALGISYRPM 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + ++LPQA+++I+P L ++Y+ L K S++   +GF D++     +   T  A E ++  
Sbjct: 134 MKDIILPQALKNILPALMNEYITLTKESAIVSTIGFLDIMRRSQIVSANTYTAFEPLIFA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             IY  L + + L   +L  ++   E
Sbjct: 194 GLIYYVLVMCLTLLGRQLERRLRRSE 219


>gi|110347170|ref|YP_665988.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283281|gb|ABG61341.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Chelativorans sp. BNC1]
          Length = 243

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  Y +A +AE +R+G+ ++PRGQ  A  A+GLT  +  R VLLP A R I+P
Sbjct: 108 FWTTVLGLGFYMSARVAEQLRAGISSLPRGQKLAGAAIGLTTPQTYRYVLLPMAFRIILP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN +KN+S+A+ +G  +L +    +   T Q  E   +   +YL+++I++ + M
Sbjct: 168 PLTSEFLNTIKNTSVALTIGLVELTARARAMQEFTFQIFEAFTVATVLYLTVNILVTIGM 227

Query: 386 NRLNAKIAL 394
             L  ++A+
Sbjct: 228 RYLEHRVAV 236


>gi|227891536|ref|ZP_04009341.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|227866683|gb|EEJ74104.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
          Length = 217

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 112/218 (51%), Gaps = 31/218 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    V SF++G+VL +      ++     G      + LPLL I  F  FGLP 
Sbjct: 22  VTLEVSVISIVLSFIIGLVLGVIRYVKIKYLSAAVGFLIDIIRNLPLLLIIFFTYFGLPE 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L                       G  ++P  ++   AL  + +A +AEIVRSG+ AVP 
Sbjct: 82  L-----------------------GLRMTP-MLAAVTALVVFESAMLAEIVRSGIQAVPV 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A + GLT+ +A   +++PQA++ +IPPL SQ+++L+K++SLA  +   +L+    
Sbjct: 118 GQMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQ 177

Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I +Q T   + + L+   +Y  +   ++L   RL  +
Sbjct: 178 IIYSQNTTYMVPMYLMIAVMYFVVCYCLSLVARRLEKR 215


>gi|225858443|ref|YP_002739953.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|225721638|gb|ACO17492.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
          Length = 225

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 11/160 (6%)

Query: 243 QLHFDKPVLGQFN--FIGGSTVS------PEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + + P+L QF   F G   +S      P + +  + +  Y  A+IAE++RSG+ ++P 
Sbjct: 62  EFYQNTPLLVQFVIVFYGLPLISDHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPS 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA++ G T+  A RL+ LPQA R I+PPLT+Q +NL+KN+S    +   DL+ V  
Sbjct: 122 GQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMFVTK 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 182 SWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221



 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH I++P
Sbjct: 80  ----LPLISDHIIMIP 91


>gi|330937577|gb|EGH41516.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 248

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 79/133 (59%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++  F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R
Sbjct: 107 ITSAFLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYR 166

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            IIPPLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ +
Sbjct: 167 IIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSL 226

Query: 382 ALFMNRLNAKIAL 394
            L M  +  K+A+
Sbjct: 227 MLLMRAIEKKVAV 239



 Score = 43.5 bits (101), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +G+++G  R   N+LV+ I  VYVE+FRN+P LV +F  Y  V  +LP
Sbjct: 46  LGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93


>gi|261343546|ref|ZP_05971191.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
 gi|282568695|gb|EFB74230.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 246

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 67/100 (67%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+P
Sbjct: 111 FISSMLCLGLFTAARMTEQVRAAIQSLPRGQKSAALAMGLTLPQTYRYVLLPNAYRVILP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWE 210



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 20/153 (13%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   ++ G   T  L+    I A ++G+  G  R   N+ +A+I   YVE+FRN+P
Sbjct: 17  GNTTYLGWLISGLEVTVTLSICAWIIAFLVGSFFGILRTVPNRFLAFIGTAYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  +  +LP    SI   F M             +D N + F+ S    + L
Sbjct: 77  LIVQFFTWYLVIPELLP---QSIGDWFKM------------ELDPNYQFFISSM---LCL 118

Query: 201 SLF-ATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            LF A R++        ++LP    S  L  GL
Sbjct: 119 GLFTAARMTEQVRAAI-QSLPRGQKSAALAMGL 150


>gi|83593424|ref|YP_427176.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83576338|gb|ABC22889.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 230

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 106/182 (58%), Gaps = 6/182 (3%)

Query: 217 KALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE---FMSLYIA 272
            +LP+L +++T  I  + ++ L+ L + ++F  P LGQ+  I G+    +   F S  + 
Sbjct: 49  SSLPVLPHLATLYINLMRSMPLVLLIFWVYFMVPYLGQW--ILGTDRPMQVGTFTSSLLT 106

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            + + AA+ AEI+RSG+ +V RGQ  AA ALGLT+ ++   V+LPQA R+++P L +Q +
Sbjct: 107 FTLFEAAYFAEIMRSGIQSVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPVLLTQVI 166

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L +++SL   +   D +     +  + G+ +E+ L    +Y ++S   +L + R+ A+ 
Sbjct: 167 VLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKRIQART 226

Query: 393 AL 394
           A+
Sbjct: 227 AI 228


>gi|292487614|ref|YP_003530486.1| putative glutamate/aspartate ABC transporter inner membrane protein
           [Erwinia amylovora CFBP1430]
 gi|292898853|ref|YP_003538222.1| glutamate/aspartate ABC transporter permease [Erwinia amylovora
           ATCC 49946]
 gi|291198701|emb|CBJ45810.1| glutamate/aspartate ABC transporter, permease protein [Erwinia
           amylovora ATCC 49946]
 gi|291553033|emb|CBA20078.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia amylovora CFBP1430]
 gi|312171721|emb|CBX79979.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 245

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%)

Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           S + P    F    + L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLL
Sbjct: 102 SEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A R I+PP+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++
Sbjct: 162 PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVA 221

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++ +I L M  +  K+ L
Sbjct: 222 INAVIMLLMGLVERKVRL 239



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            ++SY   +  GF  T  ++    I A  +G+  G  R    +L + +   YVE+FRN+P
Sbjct: 17  GNTSYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGILRTVPGRLFSSLGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFIWYLVVPELLP 93


>gi|255023362|ref|ZP_05295348.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL J1-208]
          Length = 255

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 100 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 136

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 137 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLK 196

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 197 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRL 252



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 51  ALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 110

Query: 148 LY 149
            Y
Sbjct: 111 FY 112


>gi|148988974|ref|ZP_01820374.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|182683539|ref|YP_001835286.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|303253933|ref|ZP_07340054.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|147925471|gb|EDK76548.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|182628873|gb|ACB89821.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|301801477|emb|CBW34169.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae INV200]
 gi|302599109|gb|EFL66134.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
          Length = 225

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL+ LPQA R I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221



 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH I++P
Sbjct: 80  ----LPLISDHIIMIP 91


>gi|83589975|ref|YP_429984.1| amino acid ABC transporter permease [Moorella thermoacetica ATCC
           39073]
 gi|83572889|gb|ABC19441.1| amino acid ABC transporter membrane protein, PAAT family [Moorella
           thermoacetica ATCC 39073]
          Length = 237

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 17/216 (7%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVL 237
           KI + +  LG +L L A   RLSR          +    +  PLL     + +G P L+ 
Sbjct: 20  KITLVAVSLGCILGLVAGMGRLSRRRLTSFLATCYVDFFRGTPLLVQIFIVYYGFPQLLD 79

Query: 238 IALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              K+ +     P L Q   I      P F++  +A S  + A++AEI R+G+ ++ RGQ
Sbjct: 80  EGQKFLMASLGMPQLLQTTHI------PVFVAATLATSLNSGAYVAEIFRAGIQSIERGQ 133

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA +LG+T  +  R ++LPQA + +IPPL ++++ +LK++SL   +G+ +L   G  I
Sbjct: 134 VEAARSLGMTEGQTMRYIVLPQAFKRVIPPLGNEFIAMLKDTSLLSVIGYVELTRQGQLI 193

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              T + ++I      IYL ++  I+  ++ L  ++
Sbjct: 194 SGATFKPLQIYFGVALIYLIMTFTISRLVDYLERRL 229



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G V T  +    +    I+G + G GRLS  +L +++   YV+ FR  P LV IF +
Sbjct: 11  LLLGAVQTLKITLVAVSLGCILGLVAGMGRLSRRRLTSFLATCYVDFFRGTPLLVQIFIV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y     +L      ++   GM         P L   T+  +FV
Sbjct: 71  YYGFPQLLDEGQKFLMASLGM---------PQLLQTTHIPVFV 104


>gi|284048020|ref|YP_003398359.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
 gi|283952241|gb|ADB47044.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
          Length = 218

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 113/222 (50%), Gaps = 17/222 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T++  A        +G+V+SL      R    +  + L  +Y+ TFL  G P L
Sbjct: 14  LAGAGITVEITAASVGLGLAIGVVVSLI-----RLCGIRALRVLGDIYV-TFL-RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I L Y   F  P L              +++   A S  + A++AEI R G+ ++ +G
Sbjct: 67  VQIFLVY---FALPALIHHRV-------DAYVAAISACSINSGAYVAEIFRGGIESIDKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEA  +LG+T  +  R ++LPQA + IIPPL ++++ +LK+SSL   +GF +L   G  
Sbjct: 117 QMEAGRSLGMTWWQTMRHIILPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQL 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II +T  + EI L    IYL ++  +A  +  L  +    E+
Sbjct: 177 IIARTYASFEIWLSVAIIYLVMTFAVARLVGVLERRYKKDEQ 218


>gi|307323416|ref|ZP_07602626.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306890905|gb|EFN21881.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 261

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 116/215 (53%), Gaps = 36/215 (16%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL-------IALKY 242
           F F  VLG+VL+L   RLS        + L + YI  F   G+P L++       + L +
Sbjct: 69  FGFGLVLGVVLALM--RLS---QVPPYRWLAVAYIEFFR--GVPALLVFIALGFGVPLAF 121

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           Q+  D+ V                 ++ +AL    AA+IAE +R+G+ AVP+GQMEAA +
Sbjct: 122 QVALDRHV-----------------TVMLALGLVGAAYIAETMRAGIQAVPKGQMEAARS 164

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIIN 358
           LG++H +A   +++PQA R ++PPLT++ + L K+SSL   +G +    +L   G   +N
Sbjct: 165 LGMSHSRAMASIIVPQAFRIVLPPLTNELVLLTKDSSLVYLLGLSLDQYELSKFGRDALN 224

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           Q  +++  IL+    YL +++ +   + RL A+ A
Sbjct: 225 QH-RSLTPILVAGVCYLIITVPLGQLVRRLEARSA 258


>gi|256375908|ref|YP_003099568.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255920211|gb|ACU35722.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 283

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 94/170 (55%), Gaps = 5/170 (2%)

Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +L  GLP L+ I L + L   FD   +     +  + +   F++  + L    +A++AEI
Sbjct: 110 WLFRGLPVLLQILLWFNLALVFDTISIPMVLEVRTNMLITAFVAALLGLGLNESAYMAEI 169

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+GL +V  GQ+EAA A+G+T     R V+LPQAMR IIPP  + ++N+LK +S+A  +
Sbjct: 170 VRAGLNSVDHGQVEAAKAIGMTPATTLRRVVLPQAMRVIIPPTGNNFINMLKGTSMASVI 229

Query: 345 GFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
           GF +L+     I +   Q +E +L    W  + +S + +   F+ R   K
Sbjct: 230 GFLELIHAANNIASHNLQIMETLLAAAAWYMVVVSAASVGQHFLERAYGK 279


>gi|241663975|ref|YP_002982335.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240866002|gb|ACS63663.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 222

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 82/129 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+ A+++EIVR  + +V RGQMEAA ++G++  ++ R ++LPQA+  +
Sbjct: 87  PAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+   + 
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLVLTSAASY 206

Query: 384 FMNRLNAKI 392
            ++RL   I
Sbjct: 207 LLHRLERNI 215


>gi|310766982|gb|ADP11932.1| Glutamate/aspartate transport system permease [Erwinia sp. Ejp617]
          Length = 245

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 79/138 (57%), Gaps = 3/138 (2%)

Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           S + P    F    I L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLL
Sbjct: 102 SEIDPNIQFFTCSVICLGLFTAARVCEQVRAAIQSLPGGQKNAGLAMGLTLPQTYRYVLL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A R I+PP+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++
Sbjct: 162 PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFSAITLAYVA 221

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++ +I L M  +  K+ L
Sbjct: 222 INAVIMLLMGLVERKVRL 239



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 39/77 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  ++    I A  +G+  G  R    +L++ +   YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGILRTVPGRLLSSLGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFIWYLVVPELLP 93


>gi|317153463|ref|YP_004121511.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943714|gb|ADU62765.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 295

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 83/140 (59%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F G     P F+S  + L+ +  A+IAEIVR+G+ +V RGQ EAA ALG++  +A R ++
Sbjct: 156 FFGRMDRFPRFLSAVVTLALFEGAYIAEIVRAGIRSVERGQWEAATALGMSRTRAMRHII 215

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQA++ ++P L  Q+++++K+S++   +   +L   G  I+  T +  EI    + +Y 
Sbjct: 216 MPQALQRMLPALAGQFISIIKDSAIVSVISIEELTFQGQQIMTTTYRGFEIWTTVLAMYF 275

Query: 376 SLSIMIALFMNRLNAKIALK 395
            L+   +L + +L   ++ +
Sbjct: 276 VLTFACSLAVRKLEVALSRQ 295



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 29/58 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + T  L+    + AT++G  VG  R S       +   YV + RN PPLV+IF  Y
Sbjct: 68  GLITTLRLSLWAGVLATVVGMAVGLMRTSPRLFNRQLSTTYVGLIRNTPPLVLIFVFY 125


>gi|188534470|ref|YP_001908267.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis
           Et1/99]
 gi|188029512|emb|CAO97389.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis
           Et1/99]
          Length = 245

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 3/138 (2%)

Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           S + P    F    + L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLL
Sbjct: 102 SEIDPNIQFFTCSVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A R I+PP+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++
Sbjct: 162 PNAYRVIVPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIA 221

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++ +I L M  +  K+ L
Sbjct: 222 INAVIMLLMGLVERKVRL 239



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +  GF  T  ++    + A  +G+L G  R    +L++ +   YVE+FRN+P
Sbjct: 17  GNTTYLGWLWSGFQVTIAVSVCAWVIALCVGSLFGILRTVPGRLLSSLGACYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V  F  Y  V  +LP               N G+ F +  +D N + F  S    + L
Sbjct: 77  LIVQFFIWYLVVPELLP--------------ENIGMWFKS-EIDPNIQFFTCSV---LCL 118

Query: 201 SLF-ATRLSRHFHEKTGKALP 220
            LF A R+         ++LP
Sbjct: 119 GLFTAARVCEQVRAAI-QSLP 138


>gi|83718860|ref|YP_441774.1| glutamate/aspartate ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167580592|ref|ZP_02373466.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167618699|ref|ZP_02387330.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257137942|ref|ZP_05586204.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83652685|gb|ABC36748.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 225

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 70/108 (64%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       I ++ G ++E+IL
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +
Sbjct: 19  GAIVTFKITLLAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFF 76


>gi|322833890|ref|YP_004213917.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169091|gb|ADW74790.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 246

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 3/138 (2%)

Query: 260 STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           S ++P+   F S  I L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLL
Sbjct: 102 SELAPDVQFFTSSVICLGLFTAARVCEQVRAAIQSLPSGQRNAGLAMGLTLPQTYRYVLL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ 
Sbjct: 162 PNAYRVIVPPMTSEMVNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITVAYVL 221

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++ +I L M+ +  K+ L
Sbjct: 222 INAVIMLLMHFVERKVRL 239



 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A +IG+L G  R   N++++ I   YVE+FRN+P
Sbjct: 17  GNTTYLGWIWNGFQVTVALSICAWIIAFLIGSLFGILRTVPNRILSGIGTCYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 77  LIVQFFIWYLVVPELLP 93


>gi|302521884|ref|ZP_07274226.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
 gi|302430779|gb|EFL02595.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
          Length = 322

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 74/117 (63%), Gaps = 3/117 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI R+GL+AV  GQ EAA ALG++H KA R +++PQAMR I+PP  ++ +N+LK 
Sbjct: 177 AAYMAEICRAGLLAVDEGQTEAAHALGMSHAKALRRIVIPQAMRVIVPPTGNEVINMLKT 236

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           +SL  AV + +L+     I   +G  +E++ +   W  I  S+  +   ++ R  A+
Sbjct: 237 TSLVAAVQYPELLRAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIERYYAR 293


>gi|251790178|ref|YP_003004899.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247538799|gb|ACT07420.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 231

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 97/182 (53%), Gaps = 9/182 (4%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I L L   RL+ H   +    L   YIS      +PTL+ + + Y   F  P L   +  
Sbjct: 38  IALLLLVIRLTEH---RVATRLVAAYISYHR--NVPTLIQLMMWY---FAIPTLLPESVQ 89

Query: 258 GG-STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           G  +  + EF+    AL    AA+ +E +RSGL A+P GQ EAA ALG+++ +A R V+L
Sbjct: 90  GWINAFNAEFLFSMFALGLCQAAYFSEDIRSGLRAIPDGQNEAARALGMSYMRAMREVIL 149

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R+ +P L +  + L KN+SLA+ +G A+L  V   I NQT    E  +I    YL+
Sbjct: 150 PQGIRNALPALINHTVLLFKNTSLAMVIGVAELTYVTRDIENQTFHTFEAYVIGTLGYLA 209

Query: 377 LS 378
            S
Sbjct: 210 FS 211


>gi|260888233|ref|ZP_05899496.1| glutamine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|330838428|ref|YP_004413008.1| polar amino acid ABC transporter, inner membrane subunit
           [Selenomonas sputigena ATCC 35185]
 gi|260862067|gb|EEX76567.1| glutamine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|329746192|gb|AEB99548.1| polar amino acid ABC transporter, inner membrane subunit
           [Selenomonas sputigena ATCC 35185]
          Length = 221

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 10/167 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y   F  PV      I G  V P F ++  A S  + A++AEI RSG+ 
Sbjct: 64  GTPLLVQIFLIY---FALPV------ISGQRVDPFFAAI-TACSINSGAYVAEIFRSGIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQMEA  +LG+T  +    ++LPQA++ +IP + ++++ LLK+SSL   +GF +L 
Sbjct: 114 SIDKGQMEAGRSLGMTWLQTMWHIILPQAVKRVIPQIGNEFIALLKDSSLVSVIGFEELT 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  II +T  ++EI      IYL +++ I+  +  L  +    +K
Sbjct: 174 RSGQLIIARTYGSLEIWPCVAIIYLVMTLSISQLVAYLERRFRTDDK 220


>gi|262366403|gb|ACY62960.1| glutamate/aspartate transport system permease [Yersinia pestis
           D182038]
          Length = 182

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++
Sbjct: 54  RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 113

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +SI  ++ 
Sbjct: 114 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASML 173

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 174 VNYLKKR 180


>gi|167031321|ref|YP_001666552.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166857809|gb|ABY96216.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 229

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 112/206 (54%), Gaps = 17/206 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   V   +L I L +   R SRH++ +   A+P  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  L ++P+G
Sbjct: 71  LVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQSIPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMI 381
           II +T   +EI       YL +S ++
Sbjct: 185 IIARTYLPVEIFFAAGVFYLVISFLL 210


>gi|289434115|ref|YP_003463987.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170359|emb|CBH26899.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313634164|gb|EFS00821.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri FSL N1-067]
 gi|313638787|gb|EFS03871.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri FSL S4-171]
          Length = 480

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPHKKAMLKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477



 Score = 39.7 bits (91), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLDGMWLTIKLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|53720530|ref|YP_109516.1| glutamate/aspartate transport system permease [Burkholderia
           pseudomallei K96243]
 gi|53725718|ref|YP_103984.1| glutamate/aspartate ABC transporter permease [Burkholderia mallei
           ATCC 23344]
 gi|67643522|ref|ZP_00442267.1| glutamate/aspartate transport system permease protein GltK
           [Burkholderia mallei GB8 horse 4]
 gi|76810556|ref|YP_334803.1| glutamate/aspartate ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|121601568|ref|YP_991699.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei SAVP1]
 gi|124383835|ref|YP_001027194.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei NCTC 10229]
 gi|126440693|ref|YP_001060405.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 668]
 gi|126448697|ref|YP_001082146.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei NCTC 10247]
 gi|126452941|ref|YP_001067666.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1106a]
 gi|134280384|ref|ZP_01767095.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 305]
 gi|166998511|ref|ZP_02264369.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei PRL-20]
 gi|167721207|ref|ZP_02404443.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei DM98]
 gi|167740179|ref|ZP_02412953.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 14]
 gi|167817394|ref|ZP_02449074.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 91]
 gi|167825800|ref|ZP_02457271.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 9]
 gi|167847284|ref|ZP_02472792.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei B7210]
 gi|167895872|ref|ZP_02483274.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 7894]
 gi|167904260|ref|ZP_02491465.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei NCTC 13177]
 gi|167912521|ref|ZP_02499612.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 112]
 gi|167920472|ref|ZP_02507563.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei BCC215]
 gi|217420836|ref|ZP_03452341.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 576]
 gi|226196806|ref|ZP_03792385.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei Pakistan 9]
 gi|237813796|ref|YP_002898247.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei MSHR346]
 gi|242317860|ref|ZP_04816876.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1106b]
 gi|254178792|ref|ZP_04885446.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei ATCC 10399]
 gi|254180663|ref|ZP_04887261.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1655]
 gi|254190904|ref|ZP_04897410.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254199132|ref|ZP_04905547.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei S13]
 gi|254202699|ref|ZP_04909062.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei FMH]
 gi|254208039|ref|ZP_04914389.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei JHU]
 gi|254261455|ref|ZP_04952509.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1710a]
 gi|254299252|ref|ZP_04966702.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 406e]
 gi|52210944|emb|CAH36932.1| glutamate/aspartate transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|52429141|gb|AAU49734.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           mallei ATCC 23344]
 gi|76580009|gb|ABA49484.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           pseudomallei 1710b]
 gi|121230378|gb|ABM52896.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei SAVP1]
 gi|124291855|gb|ABN01124.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei NCTC 10229]
 gi|126220186|gb|ABN83692.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 668]
 gi|126226583|gb|ABN90123.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1106a]
 gi|126241567|gb|ABO04660.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei NCTC 10247]
 gi|134248391|gb|EBA48474.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 305]
 gi|147746946|gb|EDK54023.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei FMH]
 gi|147751933|gb|EDK59000.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei JHU]
 gi|157809233|gb|EDO86403.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 406e]
 gi|157938578|gb|EDO94248.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160694706|gb|EDP84714.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei ATCC 10399]
 gi|169656962|gb|EDS88359.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei S13]
 gi|184211202|gb|EDU08245.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1655]
 gi|217396248|gb|EEC36265.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 576]
 gi|225931066|gb|EEH27074.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei Pakistan 9]
 gi|237504945|gb|ACQ97263.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei MSHR346]
 gi|238524885|gb|EEP88315.1| glutamate/aspartate transport system permease protein GltK
           [Burkholderia mallei GB8 horse 4]
 gi|242141099|gb|EES27501.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1106b]
 gi|243065196|gb|EES47382.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei PRL-20]
 gi|254220144|gb|EET09528.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1710a]
          Length = 225

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 70/108 (64%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       I ++ G ++E+IL
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +
Sbjct: 19  GAVVTFKITLLAIVIGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFF 76


>gi|311031433|ref|ZP_07709523.1| amino acid ABC transporter ATP-binding protein [Bacillus sp. m3-13]
          Length = 220

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 80/132 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S+ +AL+ +  A+IAEI R  + ++ +GQMEA  +LG+T   A R ++LPQA R  +P
Sbjct: 89  FWSVTLALAFHNGAYIAEIFRGTIQSIDKGQMEAGRSLGMTRNLAMRRIILPQAFRRALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  LK+SSLA  +GF +L +V  T    +   +  +L+    YL L  +I +F+
Sbjct: 149 PLGNQFIICLKDSSLAAFIGFYELFNVAQTQGANSFDYMTYLLVVSVYYLFLVGLIGIFV 208

Query: 386 NRLNAKIALKEK 397
           N L  K +  ++
Sbjct: 209 NLLERKFSASDR 220


>gi|332041199|gb|EGI77564.1| amino acid ABC transporter [Hylemonella gracilis ATCC 19624]
          Length = 250

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 7/158 (4%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +PTLV    ++ L    P+  +F    G+     F S  +ALS    A+I+EI R+G+ +
Sbjct: 92  MPTLV--HSEHGLLLTGPLASEFRQNYGA-----FFSGAVALSLNAGAYISEIFRAGIQS 144

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ +AA +LG TH ++ R V++PQA R ++PPL ++ + LLK+SSL  A+G ADL  
Sbjct: 145 IHQGQTQAAYSLGFTHAQSMRYVVVPQAARRMVPPLVNEAIMLLKDSSLVSAIGLADLAL 204

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
              T+     +  E  L    +YL ++++++L   RL 
Sbjct: 205 AARTVAGAYSRYWEPYLAISALYLVMTLLLSLAAKRLE 242


>gi|312864860|ref|ZP_07725091.1| putative glutamine ABC transporter, permease protein GlnM
           [Streptococcus downei F0415]
 gi|311099987|gb|EFQ58200.1| putative glutamine ABC transporter, permease protein GlnM
           [Streptococcus downei F0415]
          Length = 235

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 20/184 (10%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG F   +G  F TL M   A   + +  LG++    ++  SR+   K  KA+  +Y+  
Sbjct: 24  FGQFA--KGF-FYTLGMAVCA--LIVALALGLIFGAMSS--SRN---KLAKAIARVYVEV 73

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F     P LV        HF     G      G+   P F +  + +  YT A+++E++R
Sbjct: 74  FQ--NTPLLV--------HFVFVFYGLSILTNGAIKVPAFWTSVLCVGVYTGAYMSEVIR 123

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ ++PRGQ EAA++ G T+R+   +++LPQA+R IIPP+ +Q +NL+KN+S    +  
Sbjct: 124 SGIESIPRGQTEAALSQGFTYRETMSIIILPQAVRIIIPPMINQVVNLIKNTSTVAIISG 183

Query: 347 ADLV 350
           AD++
Sbjct: 184 ADIM 187



 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T  +A   +I A  +G + GA   S NKL   I RVYVEVF+N P LV   F++  
Sbjct: 30  GFFYTLGMAVCALIVALALGLIFGAMSSSRNKLAKAIARVYVEVFQNTPLLVHFVFVFYG 89

Query: 152 VLSVL 156
            LS+L
Sbjct: 90  -LSIL 93


>gi|239928984|ref|ZP_04685937.1| permease [Streptomyces ghanaensis ATCC 14672]
 gi|291437323|ref|ZP_06576713.1| arginine/ornithine transport permease [Streptomyces ghanaensis ATCC
           14672]
 gi|291340218|gb|EFE67174.1| arginine/ornithine transport permease [Streptomyces ghanaensis ATCC
           14672]
          Length = 312

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 124/244 (50%), Gaps = 20/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           IPD+        F ++R LS    T+           V GI+L++   RLS++       
Sbjct: 60  IPDY--------FFDDRILSGVGKTLLLTVLAMAIGIVGGILLAVM--RLSKN---PVTS 106

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++   YI  F   G P LV + + + L   F+   LG F     S     F++  + L  
Sbjct: 107 SIAWFYIWFFR--GTPVLVQLIVWFNLGLVFEYINLGPFYKDEWSDFMTPFLTALLGLGL 164

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+PP  ++ +N+L
Sbjct: 165 NEAAYMAEICRAGLLSVDEGQTEASHALGMSHAKTLRRIVVPQAMRVIVPPTGNEVINML 224

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKI 392
           K +SL   V + +L+     I   +G   E++ +    YL L+ + ++   ++ R  AK 
Sbjct: 225 KTTSLVSVVQYPELLRAAQDIGQTSGAPAEMLFLAAAWYLLLTSVFSVGQYYLERYYAKG 284

Query: 393 ALKE 396
           + ++
Sbjct: 285 STRQ 288


>gi|210623568|ref|ZP_03293894.1| hypothetical protein CLOHIR_01844 [Clostridium hiranonis DSM 13275]
 gi|210153438|gb|EEA84444.1| hypothetical protein CLOHIR_01844 [Clostridium hiranonis DSM 13275]
          Length = 223

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 118/202 (58%), Gaps = 11/202 (5%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F F++G++L L   ++S++      KAL  +YI   +I   P LV +++   +++  P +
Sbjct: 30  FGFIIGLILCL--AKMSKN---GIFKALSTIYIE--VIRDTPLLVQLSI---IYYGLPQI 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G  NF     +  +F++   ALS  + A++AEI+RSG+ +V +GQMEA+ +LGL++    
Sbjct: 80  G-INFPSLFGIPSDFIAGAFALSINSGAYVAEIMRSGIQSVDKGQMEASRSLGLSYWATM 138

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V++PQA+++I+P L +++++L+K S++   +G  D++    T+ N T  +    L   
Sbjct: 139 RHVIVPQAVKNILPSLANEFVSLVKESAILSFIGVIDIMFTANTVKNATYDSFGPYLFAA 198

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            IY  L+  ++  +  L  K+A
Sbjct: 199 AIYFVLTFTLSKLVGLLEKKMA 220


>gi|218532219|ref|YP_002423035.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium chloromethanicum CM4]
 gi|218524522|gb|ACK85107.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium chloromethanicum CM4]
          Length = 230

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 93/165 (56%), Gaps = 3/165 (1%)

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +L L+ + +  +F  P LG +  IG  T      F S  +  + + AA+ +EIVR+G+ +
Sbjct: 67  SLPLVLVIFWFYFLVPYLGAWA-IGADTPIQVGAFASALVTFTLFEAAYFSEIVRAGIQS 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA ALG+++ +  RLV+LPQA R+++P L +Q + L +++SL   +   D + 
Sbjct: 126 IPKGQSAAARALGMSYAQVMRLVVLPQAFRNMVPLLLTQTIVLFQDTSLVYVLSLTDFLG 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +  + G+ +E+ L    +Y ++    +L + RL A+ A+  
Sbjct: 186 AASKVAQRDGRLVEMYLFAALVYFAVCFAASLLVRRLQARTAIAR 230


>gi|187929866|ref|YP_001900353.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|187726756|gb|ACD27921.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
          Length = 222

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 82/129 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+ A+++EIVR  + +V RGQMEAA ++G++  ++ R ++LPQA+  +
Sbjct: 87  PAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+   + 
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLVLTSAASY 206

Query: 384 FMNRLNAKI 392
            ++RL   I
Sbjct: 207 LLHRLERNI 215


>gi|260575379|ref|ZP_05843378.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022299|gb|EEW25596.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 259

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 113/204 (55%), Gaps = 15/204 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I   + V+ +V++L  T + R  +  +G+ L   Y+   +I   P +V I++ Y     
Sbjct: 54  RIAALAGVIALVIALI-TAILRLSNSISGRWLARAYVE--VIRNTPLIVQISMFY--FAI 108

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+LG   F  G           +AL+ + AAF++EI+R+G++ V   Q EAA +LGLT 
Sbjct: 109 APLLGIERFWAG----------VLALALFEAAFLSEIIRAGILGVALTQWEAAASLGLTR 158

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  RL++LPQA+R+++PPLTS  + L+ +SS+   +  A+L + G   I     + EI 
Sbjct: 159 PQTYRLIVLPQALRAMLPPLTSSAVALVMDSSIVSVIALAELTTAGRNAIADNFLSFEIW 218

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
            +   +YL++++ ++ F  RL  +
Sbjct: 219 FLVAGLYLTITLTLSAFARRLERR 242


>gi|222150112|ref|YP_002551069.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737094|gb|ACM38057.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 274

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 81/127 (63%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    +AFIAEI R+G+ ++ +GQ+EAA +LGL   +  RLV+LPQA+R I PPL++ +
Sbjct: 146 ALCIGYSAFIAEIFRAGIESIDKGQIEAAKSLGLNRTQRFRLVILPQAIRVIFPPLSNDF 205

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + ++K+SSL   +G AD+   G    + + +  E   I  +IYL L+I ++L + R+  +
Sbjct: 206 VAMVKDSSLVSVLGVADISQAGKIYASGSFRFFETYSIVAYIYLILTIGLSLILRRVEKR 265

Query: 392 IALKEKK 398
           +  ++ +
Sbjct: 266 MRSRDGQ 272


>gi|262041260|ref|ZP_06014471.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330005985|ref|ZP_08305451.1| glutamate/aspartate transport system permease protein GltK
           [Klebsiella sp. MS 92-3]
 gi|259041376|gb|EEW42436.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328536022|gb|EGF62430.1| glutamate/aspartate transport system permease protein GltK
           [Klebsiella sp. MS 92-3]
          Length = 224

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKSYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|226941143|ref|YP_002796217.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Laribacter hongkongensis HLHK9]
 gi|226716070|gb|ACO75208.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Laribacter hongkongensis HLHK9]
          Length = 247

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 78/117 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +AL+    A+I EI R+G++++ +GQMEAA +LG+++ +A R V++PQA R ++P
Sbjct: 116 FFSGLLALTLNAGAYITEIFRAGILSIDKGQMEAARSLGMSYGQAMRFVVVPQAFRRMLP 175

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           PL ++ + LLK+SSL  A+G A+L     T+     +  E  L   F+YL+L++++A
Sbjct: 176 PLGNEAIMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEPYLTISFMYLALTMLMA 232


>gi|152969250|ref|YP_001334359.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893714|ref|YP_002918448.1| glutamate/aspartate transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|150954099|gb|ABR76129.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238546030|dbj|BAH62381.1| glutamate/aspartate transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 224

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFMPLAWFAKSYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|167837858|ref|ZP_02464741.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia thailandensis MSMB43]
          Length = 225

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 70/108 (64%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       I ++ G ++E+IL
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +  
Sbjct: 19  GAIITFKITLLAIVIGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFFLI 78

Query: 152 VLSVL 156
           V  VL
Sbjct: 79  VPQVL 83


>gi|283853410|ref|ZP_06370656.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283571223|gb|EFC19237.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 269

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 114/206 (55%), Gaps = 27/206 (13%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLPTLVLIALKYQLHFDKPV 250
           + V G+V  L   R+SR+ H         L  ST+  ++ G+P LV      QL +    
Sbjct: 83  ALVFGLVTGL--GRISRNKHIN-------LIASTYVEIVRGVPLLV------QLFYIYYA 127

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG+F  +      P+ ++  +++S    A++ E+ R+G+IA+P GQ EAA +LG    + 
Sbjct: 128 LGRFVHV------PDLLAAVLSMSVCYGAYMGEVFRAGIIAIPVGQTEAARSLGFNRAQT 181

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----I 366
              V+LPQA R+I+PP+ ++++ LLK++SL   +G ADL+  G    +++ Q  E    +
Sbjct: 182 MYHVILPQAWRTILPPVGNEFIALLKDTSLVSILGVADLLRRGREYASESFQYFETFTMV 241

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            +I++ I L LS ++++   RL+  +
Sbjct: 242 AVIYLIITLILSKLVSIMEERLSHHV 267



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 39/69 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    +  A + G + G GR+S NK +  I   YVE+ R +P LV +F++Y +
Sbjct: 68  GILVTFQVTVCSIALALVFGLVTGLGRISRNKHINLIASTYVEIVRGVPLLVQLFYIYYA 127

Query: 152 VLSVLPIPD 160
           +   + +PD
Sbjct: 128 LGRFVHVPD 136


>gi|237785697|ref|YP_002906402.1| glutamate ABC transporter permease [Corynebacterium kroppenstedtii
           DSM 44385]
 gi|237758609|gb|ACR17859.1| glutamate ABC transport system, permease protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 312

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 8/122 (6%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L+L+   YQL  +  V               F ++   L+ Y  A IAE++RSG+ A
Sbjct: 116 IPVLILMIFAYQLFAEYAVFPSEQL--------AFAAVVFGLTLYNGAVIAEVLRSGIEA 167

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ EAA+ALGLTHR+  R++LLPQA+ S++P L +Q +  LK+S+L   +G+ ++V 
Sbjct: 168 LPSGQSEAALALGLTHRQTMRIILLPQAVASMLPALIAQMVIALKDSALGYQIGYVEVVR 227

Query: 352 VG 353
            G
Sbjct: 228 SG 229



 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+   +++ T IL G   T   AF  +I A ++G ++G GRL    +V  IC V VE FR
Sbjct: 55  PFIKSTTWTTYILPGLWGTLKAAFVSIILAMLLGAVLGTGRLHHRWIVRRICGVIVEFFR 114

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLP---FGMFLNN 173
            IP L+++ F Y+        P   +      FG+ L N
Sbjct: 115 AIPVLILMIFAYQLFAEYAVFPSEQLAFAAVVFGLTLYN 153


>gi|319795335|ref|YP_004156975.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315597798|gb|ADU38864.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 231

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 15/165 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL    F  FG P L+   +K           Q+ + G      E  S  +AL+ Y
Sbjct: 66  RNIPLLAHMLFWYFGAPELLPDGIK-----------QWLYAGHI----EAYSAIVALALY 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAAF+AE +RSG+ A+P  Q EA  ALG       R V+LPQA+R  +PPL SQ L+L K
Sbjct: 111 TAAFMAEDIRSGIRAIPTVQFEAGRALGFGFLDTMRRVVLPQALRITVPPLISQTLSLWK 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           N+S+A  +G A+L+   G + + T ++ E        YL++S+ I
Sbjct: 171 NTSIATVIGVAELMYQAGQVESATFRSFESFAFASAAYLTVSLAI 215


>gi|270291410|ref|ZP_06197632.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus acidilactici 7_4]
 gi|270280256|gb|EFA26092.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus acidilactici 7_4]
          Length = 495

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 25/203 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  ++G +L+L   RLSRH    + +A+ L Y+    + G P +V + L Y         
Sbjct: 313 FGSIIGALLALM--RLSRH---TSLRAIALAYVE--FVRGTPLMVQLMLVY--------- 356

Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               F  G  V+ P   +  IA+S  +AA++AE++R G+ +V  GQ+EAA +LGL ++  
Sbjct: 357 ----FGLGIVVNLPALTAGMIAVSLNSAAYVAEVIRGGINSVDEGQVEAAQSLGLNYQDR 412

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+++I P L +++++L+K SS+   +G  DL+     + + T + +  IL+ 
Sbjct: 413 LRFVVLPQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPILVA 472

Query: 371 MFIY----LSLSIMIALFMNRLN 389
           M +Y     SLS ++  +  + N
Sbjct: 473 MVLYFVLTFSLSRLLKFYEGKFN 495


>gi|182436031|ref|YP_001823750.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776655|ref|ZP_08235920.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178464547|dbj|BAG19067.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326656988|gb|EGE41834.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 322

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 14/216 (6%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I V + VLG++L   L   RLS++        +  LYI  F   G P  V + L + L  
Sbjct: 87  ISVLAMVLGVILGVVLAVMRLSKN---PVTSWVAWLYIWFFR--GTPVYVQLLLWFNLAL 141

Query: 247 DKPVLGQFNFIGG---STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             PVL    FI     + V   FM   + L+   AA++AEI R+G+ +V  GQ EA+ AL
Sbjct: 142 IFPVL-NIPFIYKDEMTDVMTPFMCALLGLALNEAAYMAEICRAGIQSVDEGQTEASHAL 200

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  K  R V+LPQA+R IIPP  ++++N+LK SSL  AV + +L+     I + +   
Sbjct: 201 GMTQGKTMRRVVLPQALRVIIPPTGNEFINMLKTSSLVYAVTYNELLRSTSQIGSTSYAV 260

Query: 364 IEIIL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +E++    IW  +  S+  +   ++ R  A+ +L+ 
Sbjct: 261 MEMLFVASIWYIVMTSVFSVGQYYLERRFARGSLRS 296



 Score = 36.2 bits (82), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 69  GFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           G+   QG + + +  D  +   ++ G   T  ++   M+   I+G ++   RLS N + +
Sbjct: 55  GYAFSQGNIQWHAVGDKLFDKNVVAGAGRTLLISVLAMVLGVILGVVLAVMRLSKNPVTS 114

Query: 127 WICRVYVEVFRNIPPLV--VIFFLYKSVLSVLPIP 159
           W+  +Y+  FR  P  V  +++F    +  VL IP
Sbjct: 115 WVAWLYIWFFRGTPVYVQLLLWFNLALIFPVLNIP 149


>gi|327441628|dbj|BAK17993.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 221

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 114/210 (54%), Gaps = 21/210 (10%)

Query: 191 VFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLHFD 247
           V S ++GIV+ LF    ++S+       K L L+  I  FL+ G P +V I   + L+F 
Sbjct: 30  VVSILIGIVIGLFFALMKISKI------KVLELISDIYVFLVRGTPLIVQI---FILYFG 80

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                    + G  + P+F +  +AL+ +  A+I+EI+R  +  V +GQMEA  +LG+T 
Sbjct: 81  ---------LSGLFLLPDFWAASLALALHNGAYISEILRGTIQGVDKGQMEAGRSLGMTK 131

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R ++LPQA R  +PPL +Q++  LK+SSLA  +   +L +V  T+ +     +  +
Sbjct: 132 VLTLRRIILPQAFRRALPPLGNQFIIGLKDSSLAAFISMNELFNVATTLGSNNFDEMTYL 191

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LI    YL L  ++ L +NR   ++A+ ++
Sbjct: 192 LIVAIYYLVLVALLTLIVNRFEKRLAISDR 221


>gi|301299235|ref|ZP_07205522.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300215037|gb|ADJ79453.1| Glutamine transport system permease protein [Lactobacillus
           salivarius CECT 5713]
 gi|300853195|gb|EFK80792.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 217

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 31/218 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    V SF++G++L +      ++     G      + LPLL I  F  FGLP 
Sbjct: 22  VTLEVSVISIVLSFIIGLILGVIRYVKIKYLSAAVGFLIDIIRNLPLLLIIFFTYFGLPE 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L                       G  ++P  ++   AL  + +A +AEIVRSG+ AVP 
Sbjct: 82  L-----------------------GLRMTP-MLAAVTALVVFESAMLAEIVRSGIQAVPV 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A + GLT+ +A   +++PQA++ +IPPL SQ+++L+K++SLA  +   +L+    
Sbjct: 118 GQMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQ 177

Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I +Q T   + + L+   +Y  +   ++L   RL  +
Sbjct: 178 IIYSQNTTYMVPMYLMIAVMYFVVCYCLSLVARRLEKR 215


>gi|290510007|ref|ZP_06549377.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|289776723|gb|EFD84721.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 250

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 76/136 (55%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + 
Sbjct: 110 LTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 169

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L + +
Sbjct: 170 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAM 229

Query: 382 ALFMNRLNAKIALKEK 397
            + + RL     L+  
Sbjct: 230 GVALTRLGPGRKLQRS 245


>gi|330830033|ref|YP_004392985.1| amino acid ABC transporter permease [Aeromonas veronii B565]
 gi|328805169|gb|AEB50368.1| ABC-type amino acid transporter, permease protein [Aeromonas
           veronii B565]
          Length = 301

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 15/179 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLY-------------IA 272
           LI  LP LV I + Y    ++  P  G   ++G  ++SP   +L+             + 
Sbjct: 117 LIRNLPPLVFIFIFYFFIANQLLPASGLSRWLGTVSLSPWQEALFGPPARWENLISGTLC 176

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +   +AAF+AEIVR+GL A+PRGQ EAA +LGL+     R V+LPQAM  ++PPLT Q +
Sbjct: 177 VGMISAAFVAEIVRAGLAAIPRGQWEAAQSLGLSPWVRLRHVILPQAMLLMLPPLTGQLI 236

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            L+K++++   +   +L  VG  + N +G   EI L+    YL + + + + ++RL A+
Sbjct: 237 ALVKDTAIVSLISVQELTFVGTEMANSSGLVYEIWLLVAAAYLFICLSLFVLLSRLEAR 295


>gi|309781434|ref|ZP_07676170.1| glutamine ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308919847|gb|EFP65508.1| glutamine ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 222

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 82/129 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+ A+++EIVR  + +V RGQMEAA ++G++  ++ R ++LPQA+  +
Sbjct: 87  PAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+   + 
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLVLTSAASY 206

Query: 384 FMNRLNAKI 392
            ++RL   I
Sbjct: 207 LLHRLERNI 215


>gi|294814953|ref|ZP_06773596.1| permease [Streptomyces clavuligerus ATCC 27064]
 gi|294327552|gb|EFG09195.1| permease [Streptomyces clavuligerus ATCC 27064]
          Length = 351

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 79/129 (61%), Gaps = 3/129 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L    AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+P
Sbjct: 194 FLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHSKTLRRIVIPQAMRVIVP 253

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL-- 383
           P  ++ +N+LK +SL  AV F +L      I   +G  +E+  +    YL L+ ++++  
Sbjct: 254 PTGNEVINMLKTTSLVAAVQFTELFRQAQNIGQTSGAPVEMFFLAAAWYLVLTSVLSVGQ 313

Query: 384 -FMNRLNAK 391
            ++ R  A+
Sbjct: 314 YYLERHYAR 322


>gi|19704137|ref|NP_603699.1| amino acid ABC transporter permease [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296328658|ref|ZP_06871175.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|19714347|gb|AAL94998.1| Amino acid transport system permease protein [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296154257|gb|EFG95058.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 236

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 88/147 (59%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQMEA  ALGL++ +
Sbjct: 90  ILANLIFVGILRETPILIIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R +++PQA+++I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 150 AMRKIIVPQAVKNILPALVSEFITLLKETSIIGFIGGIDLLRSANIITSQTYRGVEPLLA 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +   FM ++   + + +
Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|304385122|ref|ZP_07367468.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|304329316|gb|EFL96536.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 495

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 25/203 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  ++G +L+L   RLSRH    + +A+ L Y+    + G P +V + L Y         
Sbjct: 313 FGSIIGALLALM--RLSRH---TSLRAIALAYVE--FVRGTPLMVQLMLVY--------- 356

Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               F  G  V+ P   +  IA+S  +AA++AE++R G+ +V  GQ+EAA +LGL ++  
Sbjct: 357 ----FGLGIVVNLPALTAGMIAVSLNSAAYVAEVIRGGINSVDEGQVEAAQSLGLNYQDR 412

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+++I P L +++++L+K SS+   +G  DL+     + + T + +  IL+ 
Sbjct: 413 LRFVVLPQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPILVA 472

Query: 371 MFIY----LSLSIMIALFMNRLN 389
           M +Y     SLS ++  +  + N
Sbjct: 473 MVLYFVLTFSLSRLLKFYEGKFN 495


>gi|290510404|ref|ZP_06549774.1| glutamate Aspartate transport system permease gltK [Klebsiella sp.
           1_1_55]
 gi|289777120|gb|EFD85118.1| glutamate Aspartate transport system permease gltK [Klebsiella sp.
           1_1_55]
          Length = 224

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKTYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|24379263|ref|NP_721218.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|24377179|gb|AAN58524.1|AE014921_9 putative glutamine ABC transporter, permease protein [Streptococcus
           mutans UA159]
          Length = 728

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 98/176 (55%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+     +Q     P+    +F+ G+          IAL+  
Sbjct: 569 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI---NDFVAGT----------IALTLN 611

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG++++   + ++LPQA + ++P   +Q++  LK
Sbjct: 612 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYKTTMKRIILPQAFKLMLPNFINQFVISLK 671

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +  ++     RL  +I
Sbjct: 672 DTTIISAIGLIELFQAGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRI 727


>gi|152968870|ref|YP_001333979.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|262042355|ref|ZP_06015517.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330006745|ref|ZP_08305699.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150953719|gb|ABR75749.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|259040263|gb|EEW41372.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328535746|gb|EGF62186.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 247

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 76/136 (55%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + 
Sbjct: 107 LTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 166

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L + +
Sbjct: 167 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAM 226

Query: 382 ALFMNRLNAKIALKEK 397
            + + RL     L+  
Sbjct: 227 GVALTRLGPGRKLQRS 242


>gi|27382709|ref|NP_774238.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27355881|dbj|BAC52863.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 230

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 10/227 (4%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG------ 231
           F  L  D   +   + F  G+  ++  T L+       G A+ L+ +S F + G      
Sbjct: 2   FGNLDFDVIRRALPYLFYEGMTFTVTLTALAGLGGLIFGTAIALMRLSGFKVLGRIAGVY 61

Query: 232 ---LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRS 287
              + +L L+ + +  +F  P +GQ+       +S   F S  I    + AA+ +EI+R+
Sbjct: 62  VDFMRSLPLVLVIFWFYFLVPYIGQWVTGASRPISVGAFASSLITFIMFEAAYFSEIMRA 121

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ RGQ  AA ALGLT+ +  R V+LPQA R+++P L +Q + L +++SL   +   
Sbjct: 122 GIQSISRGQPAAANALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSIP 181

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D +     +  + G+ +E+ L    +Y ++S + +  + RL A+IA+
Sbjct: 182 DFLGAASKVAQRDGRLVEMYLFAAVVYFTISCVASFGVRRLQARIAI 228


>gi|300313611|ref|YP_003777703.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076396|gb|ADJ65795.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 247

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 80/133 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +ALS    A+I+EI R+G+ ++ RGQ  AA +LG+ +    R V+LPQA R ++P
Sbjct: 115 FLSGTVALSLNAGAYISEIFRAGIQSIERGQSYAAASLGMNYGLTMRYVVLPQAFRRMLP 174

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL ++ + LLK+SSL  A+G A+L     T+     +  E  +    +Y S++I +AL +
Sbjct: 175 PLGNEAITLLKDSSLVSAIGLAELAYAARTVAGTYARYWEPYITISVLYFSMTICLALVV 234

Query: 386 NRLNAKIALKEKK 398
            RL +K +   ++
Sbjct: 235 ARLESKYSAPHRR 247


>gi|253690632|ref|YP_003019822.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251757210|gb|ACT15286.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 247

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 30/212 (14%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT----------NAKIFVFSFVLGIV 199
           +S+ S L  P + I L  G FL   G+S  T+ + T          ++++ V S V+   
Sbjct: 6   QSLESWLLAPQYLIWLWHG-FLITLGISLSTIALSTVLGFLLAAARDSQVRVLSSVVVAY 64

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
            SLF             +  PLL    F  FG   L    +   L+    +    + +G 
Sbjct: 65  SSLF-------------RNTPLLVQLFFWYFGAGQLFPSEMMQWLNTPHVI----SLLGM 107

Query: 260 STVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           +   P  EF++    L+ Y++AFIAE +R+G+  V RGQ  AA ALGLT  ++ R V+LP
Sbjct: 108 TLAWPSFEFLAGLAGLTLYSSAFIAEEIRAGIRGVARGQKYAAHALGLTGWQSMRYVVLP 167

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           QA++  +PPL  QY+N++KNSSL +A+G A+L
Sbjct: 168 QALKIALPPLLGQYMNIVKNSSLTMAIGVAEL 199



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  ++ S +  +T++G L+ A R S  ++++ +   Y  +FRN P LV +FF Y  
Sbjct: 24  GFLITLGISLSTIALSTVLGFLLAAARDSQVRVLSSVVVAYSSLFRNTPLLVQLFFWYFG 83

Query: 152 VLSVLP 157
              + P
Sbjct: 84  AGQLFP 89


>gi|269792188|ref|YP_003317092.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099823|gb|ACZ18810.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 510

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/114 (48%), Positives = 73/114 (64%), Gaps = 7/114 (6%)

Query: 249 PVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           PVL Q  F F G    G  +SP FM+  I L    AA+ AE  R+GL+AVPRGQMEAA+A
Sbjct: 343 PVLIQLFFIFYGLPNVGIKLSP-FMAGVIGLGMNYAAYEAENYRAGLLAVPRGQMEAALA 401

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           L +T  +A R V++PQA R +IPP+T+ +++LLK+SSL   +   DL    G I
Sbjct: 402 LSMTRWQALRHVVVPQAFRVVIPPVTNDFISLLKDSSLVSIITMVDLTKAYGQI 455


>gi|224372627|ref|YP_002606999.1| permease of abc transporter [Nautilia profundicola AmH]
 gi|223589720|gb|ACM93456.1| permease of abc transporter [Nautilia profundicola AmH]
          Length = 318

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 78/132 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  ++LS +  A+IAEI+R  + A+ +GQ EAA++LG T  +  +L++LPQA+R  
Sbjct: 184 PRFWAGVMSLSIFYGAYIAEILRGAIQAIDKGQHEAAMSLGFTSFQKMQLIILPQALRKA 243

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L  + ++L+K+SSL   +   DL  VG  I+  T    E  L    +YL L+ +++ 
Sbjct: 244 LPALVGELISLIKDSSLVSIISITDLTKVGREIVANTFSPFETWLTVAALYLMLTSILSF 303

Query: 384 FMNRLNAKIALK 395
             +RL  K+  K
Sbjct: 304 IGHRLEKKMKAK 315


>gi|254389017|ref|ZP_05004248.1| permease [Streptomyces clavuligerus ATCC 27064]
 gi|326443324|ref|ZP_08218058.1| permease [Streptomyces clavuligerus ATCC 27064]
 gi|197702735|gb|EDY48547.1| permease [Streptomyces clavuligerus ATCC 27064]
          Length = 313

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 74/118 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L    AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+P
Sbjct: 156 FLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHSKTLRRIVIPQAMRVIVP 215

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           P  ++ +N+LK +SL  AV F +L      I   +G  +E+  +    YL L+ ++++
Sbjct: 216 PTGNEVINMLKTTSLVAAVQFTELFRQAQNIGQTSGAPVEMFFLAAAWYLVLTSVLSV 273


>gi|320184058|gb|EFW58878.1| Putative amino-acid ABC transporter permease protein yhdX [Shigella
           flexneri CDC 796-83]
          Length = 122

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 70/115 (60%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + IVLS+   R ++ +  KTG+       +  LI GLP L        LH+D P L  FN
Sbjct: 1   MAIVLSVGLFRFNKTYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 60

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           F GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + ++
Sbjct: 61  FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLRYARS 115


>gi|312864788|ref|ZP_07725019.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus downei F0415]
 gi|311099915|gb|EFQ58128.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus downei F0415]
          Length = 230

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 87/144 (60%), Gaps = 3/144 (2%)

Query: 257 IGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           IG  TV  +F  L    I LS  + A+I+EIVR+G+ AVP+GQ+EAA +LG+   KA R 
Sbjct: 86  IGFGTVELDFSRLIPGIIILSLNSGAYISEIVRAGIEAVPKGQVEAAYSLGIKPAKAMRY 145

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA ++I+P L ++++ ++K+SSL   +G  +L +   T++  T   +E +L   F 
Sbjct: 146 VVLPQAFKNILPALGNEFITIIKDSSLLQTIGIMELWNGAQTVLATTYVPLEPLLFAAFY 205

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL L+ ++      L  ++   +K
Sbjct: 206 YLMLTTVLTAGQKWLENRLGKGQK 229


>gi|290580730|ref|YP_003485122.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans NN2025]
 gi|254997629|dbj|BAH88230.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans NN2025]
          Length = 728

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 98/176 (55%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+     +Q     P+    +F+ G+          IAL+  
Sbjct: 569 RGIPLMIVAAFIFWGIPNLIESITGHQ----SPI---NDFVAGT----------IALTLN 611

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP GQMEA+ +LG++++   + ++LPQA + ++P   +Q++  LK
Sbjct: 612 GGAYIAEIVRGGIEAVPSGQMEASRSLGISYKTTMKRIILPQAFKLMLPNFINQFVISLK 671

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++++  A+G  +L   G  II +  Q+  +  I   +YL +  ++     RL  +I
Sbjct: 672 DTTIISAIGLIELFQAGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRI 727


>gi|115350620|ref|YP_772459.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|172059653|ref|YP_001807305.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115280608|gb|ABI86125.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia ambifaria
           AMMD]
 gi|171992170|gb|ACB63089.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 225

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 68/108 (62%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQM AA ALG+ +  A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQMNAAFALGMNYAHAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       + ++ G  +E++L
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVL 199



 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +  
Sbjct: 19  GAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 78

Query: 152 VLSVL 156
           V  VL
Sbjct: 79  VPQVL 83


>gi|290476189|ref|YP_003469089.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus
           bovienii SS-2004]
 gi|289175522|emb|CBJ82325.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Xenorhabdus bovienii SS-2004]
          Length = 224

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 77/127 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ RL++LPQA R++I
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTHMQSMRLIILPQAFRAMI 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD       I  + G  IE+IL    +Y  +S   ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTATNIGERDGTQIEMILFAGVVYFVISFAASML 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 VNYLKKR 222



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 7/57 (12%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD 160
           GTL+   RLS+ K+++W   +YV +FR++P ++V+ + Y       ++VL + P  D
Sbjct: 38  GTLLAMMRLSSIKILSWFATLYVNLFRSVPLVMVLLWFYLIVPNLLQNVLGISPRTD 94


>gi|258406275|ref|YP_003199017.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798502|gb|ACV69439.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 234

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 116/211 (54%), Gaps = 26/211 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKY---QLHFDK 248
           +F +G+V  L   RLS+    K    LP L+YI   +I G P L++I   Y    + F K
Sbjct: 43  AFWVGLVFGLM--RLSK----KAIFRLPALVYIE--IIRGTPLLMVIFWFYFLAPIAFGK 94

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+             PE  S  IA   +T+A++AEIVR+G+ ++P+GQMEAA   GL+H 
Sbjct: 95  PL-------------PEAASALIAFIVFTSAYVAEIVRAGVQSLPKGQMEAARGSGLSHV 141

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEII 367
           ++ + ++LPQA+R++IP   +Q+++L K++SLA  +G  +L      + N+T  A  EI 
Sbjct: 142 QSMQYIILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVNELTRTATQVNNRTLIAPTEIF 201

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    IY  +  ++     +L  +++  + +
Sbjct: 202 ITIALIYFVVCYVLTALSRKLERQMSRYQAR 232


>gi|225854141|ref|YP_002735653.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|225723247|gb|ACO19100.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
          Length = 225

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 113/238 (47%), Gaps = 43/238 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTG 216
           FG F N  G  F TL +   +  F+ + VLGI     +T          R+   F++ T 
Sbjct: 14  FGQFFN--GFLF-TLALAIGS--FILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNT- 67

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
              PLL     + +GLP +           D  ++            P + +  + +  Y
Sbjct: 68  ---PLLVQFVIVFYGLPLIS----------DHTIM-----------IPIYWTAVLCVGLY 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQ  R I+PPLT+Q +NL+K
Sbjct: 104 HGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAK 391
           N+S    +   DL+ V  +     G  I   L    +Y +L   +A F   M + N K
Sbjct: 164 NTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQANKK 221



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH+I++P
Sbjct: 80  ----LPLISDHTIMIP 91


>gi|161504173|ref|YP_001571285.1| hypothetical protein SARI_02280 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865520|gb|ABX22143.1| hypothetical protein SARI_02280 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 224

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ RL++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMRLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFTPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|330898558|gb|EGH29977.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330981581|gb|EGH79684.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 248

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RAIEKKVAV 239



 Score = 43.5 bits (101), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +G+++G  R   N+LV+ I  VYVE+FRN+P LV +F  Y  V  +LP
Sbjct: 46  LGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93


>gi|329940763|ref|ZP_08290043.1| binding-protein-dependent transporter subunit [Streptomyces
           griseoaurantiacus M045]
 gi|329300057|gb|EGG43955.1| binding-protein-dependent transporter subunit [Streptomyces
           griseoaurantiacus M045]
          Length = 279

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 25/215 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLIALKYQLHF 246
           FV   VLG+V++L        +   +G     +YI  F   GLP L   + + +   L F
Sbjct: 83  FVVGLVLGMVIALMRLSSVGPYRWVSG-----IYIEIFR--GLPALLIFIFVGVAVPLAF 135

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                     I G T    +  + IAL   +AA++AE +R+G+ AVP+GQMEAA +LG +
Sbjct: 136 PG------TEIPGGT----YGKVAIALGLVSAAYMAETIRAGIQAVPKGQMEAARSLGFS 185

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   V++PQA R +IPPLT++ + L K+SSL + +G      +L   G  + +QT  
Sbjct: 186 HARAMISVVIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELAKFGRDLASQTAN 245

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   IL+    YL +++ +   + RL AK     K
Sbjct: 246 STP-ILVAGLCYLLVTVPLGFIVRRLEAKAGEATK 279



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +   NT     SG +   ++G ++   RLS+     W+  +Y+E+FR +P L++  F+
Sbjct: 68  ITLALKNTVLYTLSGFVVGLVLGMVIALMRLSSVGPYRWVSGIYIEIFRGLPALLIFIFV 127

Query: 149 YKSVLSVLP 157
             +V    P
Sbjct: 128 GVAVPLAFP 136


>gi|34762442|ref|ZP_00143442.1| Amino acid transport system permease protein [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27887910|gb|EAA24978.1| Amino acid transport system permease protein [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 236

 Score = 89.4 bits (220), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 87/147 (59%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQMEA  ALGL++ +
Sbjct: 90  ILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA+++I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 150 TMRKIIVPQAVKNILPALVSEFITLLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +   FM ++   + + +
Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|291544793|emb|CBL17902.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus sp. 18P13]
          Length = 233

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 18/232 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-- 227
           FL +    + T  + T   +  F+ +LG+VL  F   + R  H+K GK   L + +    
Sbjct: 15  FLKDDRWKYLTDGLSTTLIVTFFAVILGMVLG-FLIAIVRATHDKNGKLGVLNFFAKVYL 73

Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIV 285
            +I G P +V + + Y             FI  +TV+  + +   +A    +AA++AEIV
Sbjct: 74  TVIRGTPVVVQLLILY-------------FIIFATVNIDKTLVAILAFGLNSAAYVAEIV 120

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG++++  GQ EA  +LGL + K    ++LPQA ++I+P L ++ + LLK +S+A  + 
Sbjct: 121 RSGIMSIDNGQFEAGASLGLNYSKTMLCIILPQAFKNILPALANECIVLLKETSVAGYIA 180

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL   G  I +QT +A   ++    IYL + + ++  + +L  ++A  ++
Sbjct: 181 LVDLTKGGDIIRSQTYEAFLPLIAVAIIYLVMVMFLSAMVTKLERRLAKSDR 232


>gi|288936937|ref|YP_003440996.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288891646|gb|ADC59964.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 250

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 76/136 (55%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + 
Sbjct: 110 LTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 169

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L + +
Sbjct: 170 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAM 229

Query: 382 ALFMNRLNAKIALKEK 397
            + + RL     L+  
Sbjct: 230 GVALTRLGPGRKLQRS 245


>gi|111022633|ref|YP_705605.1| glutamine transport system permease protein [Rhodococcus jostii
           RHA1]
 gi|110822163|gb|ABG97447.1| probable glutamine transport system permease protein [Rhodococcus
           jostii RHA1]
          Length = 489

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL  + F+ FG+P     AL +Q+                     F +  I LS  
Sbjct: 335 RGTPLLVQAFFIYFGIPA----ALDFQMS-------------------AFTAGIITLSLN 371

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEIVR G+++V +GQMEA+ +LG+++ K+ + V++PQA+R++IP   +Q++  LK
Sbjct: 372 AGAYMAEIVRGGILSVDKGQMEASRSLGISYLKSMQKVVMPQAVRTMIPSYINQFVITLK 431

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G A+L   G  II +  Q+  + LI   +Y  + + +    NRL  +I
Sbjct: 432 DTSILSVIGLAELTQTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 487



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 13/96 (13%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           A ++G + G  R+S N ++  I   YV+VFR  P LV  FF+Y        IP     L 
Sbjct: 305 ALVLGAIFGLFRVSTNIVLRGIGTTYVDVFRGTPLLVQAFFIY------FGIP---AALD 355

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           F M     G+    +T+  NA  ++   V G +LS+
Sbjct: 356 FQMSAFTAGI----ITLSLNAGAYMAEIVRGGILSV 387


>gi|323698192|ref|ZP_08110104.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458124|gb|EGB13989.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 336

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 5/206 (2%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ + S   GI++ LF T LSR       K   + YI   LI G P LV I + Y +   
Sbjct: 134 EVSIISIFFGILIGLF-TGLSRISSNPFLKMSAITYIE--LIRGTPLLVQIMIWYFVL-- 188

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             +L       G    PE      +L+ +  A++AEIVR+G+ ++ +GQMEAA +LG+T 
Sbjct: 189 GTILNNLLIKAGLFQIPELWFGVASLAIFAGAYVAEIVRAGIQSIHKGQMEAARSLGMTK 248

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
             A R ++LPQA + I+PPL  Q+++L+K+SSL   +   +L       +  +    E+ 
Sbjct: 249 VTAMRKIILPQAFKRILPPLAGQFISLIKDSSLLGVMAIRELTKATREAVTTSLMPYELW 308

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   +YL ++  +++F+  L  + A
Sbjct: 309 FVCGVLYLVITFTLSMFVQYLEKRTA 334


>gi|317046629|ref|YP_004114277.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948246|gb|ADU67721.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 251

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 30/215 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS------TFLIFGLPTLVLIALKYQL 244
           +F+F +GI+L L   RLS           P  ++S       +L+ G+P ++++   Y  
Sbjct: 40  LFAFPVGILLGL--ARLS-----------PWRWLSWPATCWVYLLRGIPLMMVVFWTY-- 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P+L   N  G       F ++   L  Y +A+IAEIVR G+ A+P GQ EAA ALG
Sbjct: 85  -FCVPLLIGHNISG-------FSTMLCTLVIYESAYIAEIVRGGIQALPHGQYEAARALG 136

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363
           + H K  RLV+LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   + 
Sbjct: 137 MGHIKTLRLVILPQALFNTLPSLVSQLVSIIKDSTLGYVINVPELTFAANQVSNQLLTKP 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++  I    Y  +   +    N+L A++A K ++
Sbjct: 197 FQVFAIVALSYYIICFSLTWLANQLEARLAQKRRQ 231


>gi|12056613|gb|AAG47970.1| mimosine transporter permease [Rhizobium sp. TAL1145]
          Length = 234

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 7/152 (4%)

Query: 231 GLPTLVLIALKYQLH--FDK-----PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           G P LV + L Y L   F       P LG    I  +TV    ++  +ALS + A ++AE
Sbjct: 35  GTPALVQLILWYNLSLIFKDITLWLPGLGTVFSIPTNTVMTPLVAAVVALSLHEAGYMAE 94

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+GL +V RGQ EAA+ LG+      R +++PQAMR IIPP  ++ +NLLK +SL   
Sbjct: 95  IIRNGLKSVNRGQTEAALCLGMKPSLLLRRIVIPQAMRVIIPPTGNETINLLKTTSLVSI 154

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +   DL+     I  +T + I ++L+  F YL
Sbjct: 155 IAVGDLLYSAQAIYARTFETIPLLLVATFWYL 186


>gi|289624941|ref|ZP_06457895.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289650482|ref|ZP_06481825.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|330867231|gb|EGH01940.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 248

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 32/48 (66%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +G+++G  R   ++LV+ I  VYVE+FRN+P LV +F  Y  V  +LP
Sbjct: 46  LGSVLGVMRTVPSRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93


>gi|251790579|ref|YP_003005300.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247539200|gb|ACT07821.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 281

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IALS    A++AE +RSG++AVPRGQ EAA+ALGL+    T  V+ PQA+R IIP
Sbjct: 142 FTSGIIALSLNYGAYLAETIRSGVLAVPRGQKEAAMALGLSRWVITTHVVAPQALRIIIP 201

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  SQ+++++K+SSL   +G  +L  +  +    T   +E++     IY  LSI + L  
Sbjct: 202 PAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRSTYHYMEMLTTAAVIYWLLSIGLELLQ 261

Query: 386 NRLNAK 391
            RL  +
Sbjct: 262 GRLERR 267


>gi|322372850|ref|ZP_08047386.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321277892|gb|EFX54961.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 232

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 76/112 (67%), Gaps = 8/112 (7%)

Query: 247 DKPVLGQFN--FIGGSTVSPEFMSLYIALSC------YTAAFIAEIVRSGLIAVPRGQME 298
           + P+L QF   F G S ++   + L I+L+       YT A+I+EI+R+G+ AVP+GQ E
Sbjct: 75  NTPLLVQFVVVFYGISILTDGHIMLPISLTAILCVGIYTGAYISEIIRTGIEAVPKGQTE 134

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AA++ G T+    R+++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 135 AALSQGFTYADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149
           GF  T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV  V+ F  
Sbjct: 29  GFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGIARVYVEIFQNTPLLVQFVVVFYG 88

Query: 150 KSVLSVLPIPDHSIVLPFGM 169
            S+L+     D  I+LP  +
Sbjct: 89  ISILT-----DGHIMLPISL 103


>gi|297624236|ref|YP_003705670.1| polar amino acid ABC transporter inner membrane subunit [Truepera
           radiovictrix DSM 17093]
 gi|297165416|gb|ADI15127.1| polar amino acid ABC transporter, inner membrane subunit [Truepera
           radiovictrix DSM 17093]
          Length = 408

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 89/145 (61%), Gaps = 12/145 (8%)

Query: 262 VSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           V PE +S      +AL+ ++AA++AE VR GL AVP+GQ EAA ALGL+  +A RL++LP
Sbjct: 262 VGPERVSALTRALVALTLFSAAYMAENVRGGLQAVPKGQSEAARALGLSGWQAMRLIILP 321

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA++++IP +  Q + L K++SL + VG AD   V   I+ Q   +++++     I L L
Sbjct: 322 QALKAVIPAIVGQAIGLFKDTSLVLIVGLADFFQV-HNIVAQQNASLQVV---GGIRLEL 377

Query: 378 SIMIAL----FMNRLNAKIALKEKK 398
           S+ +A+    F  R++      EK+
Sbjct: 378 SLFLAVVYWFFAYRMSVASRQLEKE 402


>gi|27378024|ref|NP_769553.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27351170|dbj|BAC48178.1| blr2913 [Bradyrhizobium japonicum USDA 110]
          Length = 368

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 110/202 (54%), Gaps = 18/202 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F F LGI+++L      R       ++L +LY+   LI G+P + L+ +   + F   + 
Sbjct: 178 FGFPLGILVAL-----GRRSKLPAIRSLSVLYVE--LIRGVPLVSLLFMA-SVMFPLFMP 229

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             FN         + +   IA+  +  A++AE++R GL AVPRGQ EAA ALGL++ +  
Sbjct: 230 SGFNI-------DKLLRAQIAIILFAGAYLAEVIRGGLQAVPRGQYEAAEALGLSYWRKH 282

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-IINQTGQ--AIEIIL 368
           RL++LPQA+R +IPPL + ++   K++SL + +G  DL++   T II+   Q  ++E+ +
Sbjct: 283 RLIVLPQAIRHVIPPLVNTFIAFFKDTSLVLIIGIFDLLTTAKTAIIDPAWQQFSVEVYI 342

Query: 369 IWMFIYLSLSIMIALFMNRLNA 390
               IY      ++ +   L A
Sbjct: 343 FVAAIYFVFCFAMSRYSRGLEA 364


>gi|322517752|ref|ZP_08070604.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
 gi|322123596|gb|EFX95214.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 232

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 66/92 (71%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P  ++  + +  YT A+I+EI+R+G+ AVP+GQ EAA++ G T+    R+++LPQ
Sbjct: 95  GHVMIPISLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQ 154

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+R+I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 155 AVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149
           GF  T  ++   +I A ++G + GA   + NK++  I R+YVE+F+N P LV  V+ F  
Sbjct: 29  GFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRIYVEIFQNTPLLVQFVVVFYG 88

Query: 150 KSVLSVLPIPDHSIVLPFGM 169
            S+L+     D  +++P  +
Sbjct: 89  ISILT-----DGHVMIPISL 103


>gi|300870920|ref|YP_003785791.1| amino acid transport system permease [Brachyspira pilosicoli
           95/1000]
 gi|300688619|gb|ADK31290.1| amino acid transport system permease protein [Brachyspira
           pilosicoli 95/1000]
          Length = 237

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 87/141 (61%), Gaps = 2/141 (1%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+G    +P  +   IA    +AA++AEI+R+G+  + +GQMEA+ ALGL +  + + ++
Sbjct: 97  FVGALRNTPILIISAIAFGINSAAYVAEIIRAGIEGLDKGQMEASRALGLNYGLSMKEII 156

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQA++ I+P L S+++ L+K +S+   +G  DL+     I +QT + +E ++    IYL
Sbjct: 157 IPQAIKKILPALVSEFITLIKETSIVGFIGGVDLLRSANIITSQTYRGVEPLIAVGIIYL 216

Query: 376 SLSIMIALFMNRLNAKIALKE 396
            L+ + A+FM ++     LKE
Sbjct: 217 ILTSIFAMFMRKVEK--GLKE 235


>gi|284009202|emb|CBA76273.1| amino acid ABC transporter, permease protein [Arsenophonus
           nasoniae]
          Length = 245

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/100 (47%), Positives = 69/100 (69%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S EF++  I L  Y+  FIAE +R+G+  V +GQ  AA+ALGL+  +A R V+LPQA++ 
Sbjct: 111 SFEFLAGVIGLILYSTPFIAEELRAGIYGVKQGQNFAALALGLSDWQAMRYVVLPQALKI 170

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            +PPL  QY+N++KNSSL +A+G A+L  V   I +Q+ Q
Sbjct: 171 AMPPLLGQYMNIVKNSSLTMAIGVAELSYVSRQIESQSLQ 210



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 41/74 (55%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I  G + T  ++F  ++ ++++G +V A R S    + W+   Y+ +FRN P L+
Sbjct: 14  EYFDWIWQGLLITIGISFCAIVFSSLLGFVVVAARDSHIVFLRWLAISYISLFRNTPLLI 73

Query: 144 VIFFLYKSVLSVLP 157
            +FF Y +V  +LP
Sbjct: 74  QLFFWYFAVGGILP 87


>gi|228478438|ref|ZP_04063042.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|312862640|ref|ZP_07722880.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|312862691|ref|ZP_07722931.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|228249796|gb|EEK09083.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|311101500|gb|EFQ59703.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|311101551|gb|EFQ59754.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
          Length = 232

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 66/92 (71%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P  ++  + +  YT A+I+EI+R+G+ AVP+GQ EAA++ G T+    R+++LPQ
Sbjct: 95  GHVMIPISLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQ 154

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+R+I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 155 AVRTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149
           GF  T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV  V+ F  
Sbjct: 29  GFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVVFYG 88

Query: 150 KSVLSVLPIPDHSIVLPFGM 169
            S+L+     D  +++P  +
Sbjct: 89  ISILT-----DGHVMIPISL 103


>gi|226365139|ref|YP_002782922.1| glutamine ABC transporter glutamine-binding/permease protein
           [Rhodococcus opacus B4]
 gi|226243629|dbj|BAH53977.1| putative glutamine ABC transporter glutamine-binding/permease
           protein [Rhodococcus opacus B4]
          Length = 489

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL  + F+ FG+P     AL +Q+                     F +  I LS  
Sbjct: 335 RGTPLLVQAFFIYFGIPA----ALDFQMS-------------------AFTAGIITLSLN 371

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEIVR G+++V +GQMEA+ +LG+++ K+ + V++PQA+R++IP   +Q++  LK
Sbjct: 372 AGAYMAEIVRGGILSVDKGQMEASRSLGISYLKSMQKVVMPQAVRTMIPSYINQFVITLK 431

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G A+L   G  II +  Q+  + LI   +Y  + + +    NRL  +I
Sbjct: 432 DTSILSVIGLAELTQTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 487



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 13/96 (13%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           A ++G + G  R+S N ++  I   YV+VFR  P LV  FF+Y        IP     L 
Sbjct: 305 ALVLGAIFGLFRVSTNIVLRGIGTTYVDVFRGTPLLVQAFFIY------FGIP---AALD 355

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           F M     G+    +T+  NA  ++   V G +LS+
Sbjct: 356 FQMSAFTAGI----ITLSLNAGAYMAEIVRGGILSV 387


>gi|77460757|ref|YP_350264.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77384760|gb|ABA76273.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 248

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ + L  +TAA + E VR+G+ A+PRGQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMVEKKVAV 239



 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
           ++G+L+G  R   N++V+ I   YVE+FRN+P LV +F  Y  V  +LP PD
Sbjct: 45  LLGSLLGIMRTVPNRIVSGIATCYVELFRNVPLLVQLFIWYFLVPDLLP-PD 95


>gi|283786454|ref|YP_003366319.1| putative membrane component of ABC transporter [Citrobacter
           rodentium ICC168]
 gi|282949908|emb|CBG89533.1| putative membrane component of ABC transporter [Citrobacter
           rodentium ICC168]
          Length = 254

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 76/131 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++  GQMEA+ ALG+   K  R V+LPQA R I+P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDPGQMEASRALGMPWWKTMRKVILPQAFRRILP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  L+ ++A  +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLAQMV 241

Query: 386 NRLNAKIALKE 396
           NRL  +    +
Sbjct: 242 NRLEKRFGKSD 252


>gi|89902913|ref|YP_525384.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89347650|gb|ABD71853.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 222

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 82/129 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   I L  Y+ A+++EIVR  + ++ RGQMEAA ++G+++  A R ++LPQA+  +
Sbjct: 87  PAFVCGVIGLGIYSGAYVSEIVRGSIQSIDRGQMEAARSVGMSYGTAMRTIILPQALVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   D++  G  II+ T +++E+ L    IY  L+ +  L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVTYRSLEVYLAIAAIYFVLTGLTTL 206

Query: 384 FMNRLNAKI 392
            + R+  ++
Sbjct: 207 ALRRIEQRL 215


>gi|313496643|gb|ADR58009.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 229

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 17/205 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   V   +L I L +   R SRH++ +   A+P  YI  F   G P LV + L
Sbjct: 19  LTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLFL 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  L ++P+G+
Sbjct: 72  VYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQSIPKGE 125

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  TI
Sbjct: 126 IEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTI 185

Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381
           I +T   +EI       YL +S M+
Sbjct: 186 IARTYLPVEIFFAAGVFYLVISFML 210


>gi|262362593|gb|ACY59314.1| glutamate/aspartate transport system permease [Yersinia pestis
           D106004]
          Length = 205

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++
Sbjct: 77  RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 136

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +SI  ++ 
Sbjct: 137 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASML 196

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 197 VNYLKKR 203



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 7/57 (12%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD 160
           GT++   RLS  K ++W    YV VFR+IP ++V+ + Y       ++VL + P  D
Sbjct: 19  GTILAVMRLSPIKAISWFATAYVNVFRSIPLVMVLLWFYLVVPGFLQNVLGLSPKTD 75


>gi|222153406|ref|YP_002562583.1| amino acid ABC transporter permease [Streptococcus uberis 0140J]
 gi|222114219|emb|CAR42794.1| putative amino acid ABC transporter permease protein [Streptococcus
           uberis 0140J]
          Length = 229

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 107/186 (57%), Gaps = 12/186 (6%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLY---IA 272
           PL +++ F ++   G P +V I + +  +HF+   +   NF     +  +F  L    I 
Sbjct: 48  PLKWLANFYVWIFRGTPMVVQIMIAFAWMHFNN--MPTVNF---GVLDLDFSRLLPGIII 102

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  + A+I+EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++
Sbjct: 103 ISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPKNAMRYVILPQAFKNILPALGNEFI 162

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++K+S+L   +G  +L +   T++  T   I  +L   F YL ++ +++  +  L  K+
Sbjct: 163 TIIKDSALLQTIGVMELWNGAQTVVTSTYLPITPLLFAAFYYLMVTTVLSYLLTILENKM 222

Query: 393 ALKEKK 398
               KK
Sbjct: 223 GQGVKK 228


>gi|22125090|ref|NP_668513.1| glutamate/aspartate inner membrane permease [Yersinia pestis KIM
           10]
 gi|45440930|ref|NP_992469.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51595453|ref|YP_069644.1| ABC glutamate/aspartate transporter, permease subunit gltK
           [Yersinia pseudotuberculosis IP 32953]
 gi|108808477|ref|YP_652393.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Antiqua]
 gi|108811262|ref|YP_647029.1| glutamate/aspartate transport system permease [Yersinia pestis
           Nepal516]
 gi|145599903|ref|YP_001163979.1| glutamate/aspartate transport system permease [Yersinia pestis
           Pestoides F]
 gi|149365486|ref|ZP_01887521.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CA88-4125]
 gi|153946873|ref|YP_001401884.1| glutamate/aspartate ABC transporter permease GltK [Yersinia
           pseudotuberculosis IP 31758]
 gi|162421571|ref|YP_001606325.1| glutamate/aspartate ABC transporter permease GltK [Yersinia pestis
           Angola]
 gi|165925298|ref|ZP_02221130.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937730|ref|ZP_02226292.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008308|ref|ZP_02229206.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212318|ref|ZP_02238353.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167398818|ref|ZP_02304342.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422495|ref|ZP_02314248.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167423767|ref|ZP_02315520.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468412|ref|ZP_02333116.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis FV-1]
 gi|170025233|ref|YP_001721738.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894484|ref|YP_001871596.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929694|ref|YP_002347569.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CO92]
 gi|229838160|ref|ZP_04458319.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895952|ref|ZP_04511122.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Pestoides A]
 gi|229898729|ref|ZP_04513874.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901500|ref|ZP_04516622.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Nepal516]
 gi|270489686|ref|ZP_06206760.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504417|ref|YP_003568479.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Z176003]
 gi|21957945|gb|AAM84764.1|AE013722_3 glutamate/aspartate inner membrane permease [Yersinia pestis KIM
           10]
 gi|45435789|gb|AAS61346.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51588735|emb|CAH20346.1| ABC glutamate/aspartate transporter, permease subunit gltK
           [Yersinia pseudotuberculosis IP 32953]
 gi|108774910|gb|ABG17429.1| glutamate/aspartate transport system permease [Yersinia pestis
           Nepal516]
 gi|108780390|gb|ABG14448.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Antiqua]
 gi|115348305|emb|CAL21236.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CO92]
 gi|145211599|gb|ABP41006.1| glutamate/aspartate transport system permease [Yersinia pestis
           Pestoides F]
 gi|149291899|gb|EDM41973.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CA88-4125]
 gi|152958368|gb|ABS45829.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pseudotuberculosis IP 31758]
 gi|162354386|gb|ABX88334.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis Angola]
 gi|165914480|gb|EDR33095.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922905|gb|EDR40056.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992690|gb|EDR44991.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206249|gb|EDR50729.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958509|gb|EDR55530.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051322|gb|EDR62730.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057937|gb|EDR67683.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169751767|gb|ACA69285.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697510|gb|ACC88139.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681429|gb|EEO77523.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Nepal516]
 gi|229688277|gb|EEO80348.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694526|gb|EEO84573.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700875|gb|EEO88904.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Pestoides A]
 gi|270338190|gb|EFA48967.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294354876|gb|ADE65217.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Z176003]
 gi|320016183|gb|ADV99754.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 224

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +SI  ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASML 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 VNYLKKR 222



 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    ++   + GT++   RLS  K ++W    YV VFR+IP ++V+ + 
Sbjct: 16  LLQGLIVTVKITLIAIVFGILWGTILAVMRLSPIKAISWFATAYVNVFRSIPLVMVLLWF 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|227112257|ref|ZP_03825913.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 225

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 86/138 (62%), Gaps = 1/138 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T SP F +  IALS  ++AF AE+ R  + ++  GQ E A ALG++   A R V+LPQA+
Sbjct: 87  TFSP-FTAAVIALSAQSSAFYAEVYRGAISSIHTGQWEGAKALGMSKSTALRRVILPQAL 145

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R +IPP   +   L+K++SLA ++ +++L+     I +QT + +E+  +   +Y +L ++
Sbjct: 146 RRMIPPFIERSFELIKSTSLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLL 205

Query: 381 IALFMNRLNAKIALKEKK 398
           I+LF   +  +++L +++
Sbjct: 206 ISLFSQHIEKRLSLTDRR 223


>gi|269796950|ref|YP_003316405.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
 gi|269099135|gb|ACZ23571.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
          Length = 288

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 85/136 (62%), Gaps = 2/136 (1%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F ++ I L+ Y AA +AEI+R+GL A+P+GQ EA  A+GLT  +  RLV LPQ +R ++
Sbjct: 137 SFQAVVIGLTLYNAAIVAEILRAGLAALPKGQAEAGTAIGLTRGQTLRLVQLPQVIRLML 196

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIA 382
           P L SQ++ LLK+SSL   VG+ +L++   T  N   +   + + L+   +YL+++I ++
Sbjct: 197 PSLISQFVVLLKDSSLGFIVGYPELLNAMKTNYNFFGSDSRLPLFLVVAVVYLTVNIALS 256

Query: 383 LFMNRLNAKIALKEKK 398
                +  +++ + +K
Sbjct: 257 RLAVYIEKRLSSRGQK 272


>gi|229120292|ref|ZP_04249542.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 95/8201]
 gi|228663102|gb|EEL18692.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 95/8201]
          Length = 214

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP      LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                              +++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------IIAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQIISGQ 181



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|206578453|ref|YP_002240193.1| putative amino acid ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|206567511|gb|ACI09287.1| putative amino acid ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
          Length = 250

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 76/136 (55%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + 
Sbjct: 110 LTPEFLCSMWGLGIFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 169

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L + +
Sbjct: 170 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAM 229

Query: 382 ALFMNRLNAKIALKEK 397
            + + RL     L+  
Sbjct: 230 GVALTRLGPGRKLQRS 245


>gi|325267568|ref|ZP_08134220.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Kingella denitrificans ATCC 33394]
 gi|324980918|gb|EGC16578.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Kingella denitrificans ATCC 33394]
          Length = 245

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 76/121 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+    A+I EI R+G+ ++ RGQMEAA +LGLT+ +A R V+LPQA+R ++PPL ++
Sbjct: 118 LALTVNAGAYITEIFRAGIQSIDRGQMEAARSLGLTYAQAMRYVILPQALRRMLPPLANE 177

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSL  A+  A+L  V  TI  +       +     IYL LS+ ++    RL  
Sbjct: 178 FITLMKDSSLLSAIAVAELAYVQSTISGRYSIYEAPLYTVALIYLILSMGLSWIFARLEK 237

Query: 391 K 391
           K
Sbjct: 238 K 238


>gi|218888237|ref|YP_002437558.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759191|gb|ACL10090.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 229

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 10/132 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P L+LI   +  +F  P+      + G T+ PE  S  +A   +T A+IAEIVR+
Sbjct: 68  IIRGIPLLMLI---FWFYFLAPI------VLGRTL-PEAESALVAFIVFTGAYIAEIVRA 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++A+P GQMEAA   GL+  +A   V+LPQA+R++IP   +Q+++L K++SLA  +G +
Sbjct: 118 GVLALPHGQMEAARGTGLSKSQAMIYVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVS 177

Query: 348 DLVSVGGTIINQ 359
           +L      I N+
Sbjct: 178 ELTRTATQINNR 189


>gi|330957763|gb|EGH58023.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 248

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYCNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 33/49 (67%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++G+++G  R   N+LV+ I  VYVE+FRN+P LV +F  Y  V  +LP
Sbjct: 45  LLGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93


>gi|327400780|ref|YP_004341619.1| polar amino acid ABC transporter inner membrane subunit
           [Archaeoglobus veneficus SNP6]
 gi|327316288|gb|AEA46904.1| polar amino acid ABC transporter, inner membrane subunit
           [Archaeoglobus veneficus SNP6]
          Length = 224

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 86/138 (62%), Gaps = 1/138 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE   + +AL+  + A+IAEI+R+G+ +VP+GQMEAA +LG+++ +A R V+ PQ
Sbjct: 86  GINLPPEPAGI-LALTLNSGAYIAEIIRAGIQSVPKGQMEAARSLGMSYFQAMRYVVFPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+I+P L ++++ LLK+SSL   +  A+L  VG  I + T  A   +L     YL ++
Sbjct: 145 AFRNILPALGNEFIALLKDSSLLSVIAIAELTRVGKQIYSTTFNAWTPLLGVALFYLMMT 204

Query: 379 IMIALFMNRLNAKIALKE 396
           + ++  +N    ++   E
Sbjct: 205 LPLSRLVNYAQKRLGGHE 222


>gi|311069227|ref|YP_003974150.1| glutamine ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310869744|gb|ADP33219.1| glutamine ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 216

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 82/127 (64%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+ YT+AFIAE +R+G+ +V +GQMEAA + G T+ +A   ++LPQA++ ++P
Sbjct: 86  FQAGTIALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLYIILPQAIKIVMP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q+LNL+KNSS+   V   DL+     + ++T    ++ +     YL L+I ++L +
Sbjct: 146 PLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSRTLVVFDVYIFVALFYLVLTIPLSLGV 205

Query: 386 NRLNAKI 392
             L  ++
Sbjct: 206 TYLEKRL 212



 Score = 36.2 bits (82), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 31/60 (51%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF +T   +   +  + ++G LV   R++  K + W    YVE  RNIP L++ F  +
Sbjct: 14  LDGFYHTLLASVIALAGSFVLGVLVAVMRITTFKPLQWTGTAYVEFIRNIPLLLITFVFF 73


>gi|229542708|ref|ZP_04431768.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229327128|gb|EEN92803.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 219

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 17/206 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F FVLG + +LF        H KT K +  +Y S F   G P +V + L Y   F  P 
Sbjct: 31  LFGFVLGTIFALFKIS-----HIKTLKWIGDIYTSIFR--GTPLIVQLMLIY---FAIPQ 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L       G  + P F S  +A    +AA+++EI+R+G+ AV +GQ EAA ALG+ +   
Sbjct: 81  LT------GYDIQP-FPSAILAFGLNSAAYVSEIIRAGIQAVDKGQTEAAQALGVPYYLM 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + ++LPQAM++I+P L +++++L K S+L   +G+ DL+     +  QT    E +L  
Sbjct: 134 MKDLILPQAMKNILPALMNEFVSLTKESALVSTIGYLDLMRRAQVVGAQTYHNFEPLLFV 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             IY  L  ++ +   ++  K+   +
Sbjct: 194 AAIYWVLVFILTMLGKQVERKMKYSD 219


>gi|254389484|ref|ZP_05004711.1| glutamate transport system permease protein gluC [Streptomyces
           clavuligerus ATCC 27064]
 gi|294815861|ref|ZP_06774504.1| Putative glutamate ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444203|ref|ZP_08218937.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197703198|gb|EDY49010.1| glutamate transport system permease protein gluC [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328460|gb|EFG10103.1| Putative glutamate ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
          Length = 214

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VPRGQ EAA +LG++  +   +V+LPQA R++IPP+ S 
Sbjct: 89  LALGCYTSAFICEALRSGINTVPRGQGEAARSLGMSFGQTLTVVILPQAFRTVIPPVGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
            + L KNS++A A    +L+S   T +++ G  I    +W+ + YL +++ I+   N L 
Sbjct: 149 LIALAKNSAIAGAFSVTELLSTYKT-LSELGYNIVWTFVWIAVGYLIITLTISALFNVLE 207

Query: 390 AK 391
            +
Sbjct: 208 KR 209


>gi|126699792|ref|YP_001088689.1| amino-acid ABC transporter permease [Clostridium difficile 630]
 gi|255101314|ref|ZP_05330291.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|255307190|ref|ZP_05351361.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
 gi|115251229|emb|CAJ69060.1| ABC-type transport system,cystine/aminoacid-family permease
           [Clostridium difficile]
          Length = 222

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 114/203 (56%), Gaps = 15/203 (7%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F  S +LG++L+ F    S+     T      +Y+S F   G P L+ I   +  +F  P
Sbjct: 31  FFLSILLGVILAFFTQTKSKVLQYITR-----VYVSFFR--GTPLLIQI---FFFYFGFP 80

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++  F+F+     SP ++++ I L   ++A++AEI+R+ + +V +GQ EA  A GL+  +
Sbjct: 81  MI--FSFM--KDCSP-YLAIVICLGVNSSAYMAEIIRASIESVDKGQQEACYAFGLSKYQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   ++LPQA  S +PP+ S  L+++K SSL + +G  DL+ V       + +  EI +I
Sbjct: 136 SMVKIILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMI 195

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
            + IY ++SI+++   +++  +I
Sbjct: 196 TILIYWAVSIILSNIQSKVEKRI 218


>gi|152987622|ref|YP_001349398.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150962780|gb|ABR84805.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 248

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ I L  +TAA + E VR+G+ A+P GQ  AA A+G    +  R VLLPQA R IIP
Sbjct: 111 YLSVVICLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RLVERKVAV 239



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    + G   T  ++  G I A  +G+L+G  R   N+LV+ I   YVE+FRN+P
Sbjct: 17  GSETYLDWYIAGLGWTIAISLVGWIIALALGSLLGVMRTVPNRLVSGIATAYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y  V  +LP
Sbjct: 77  LLVQLFIWYFLVPDLLP 93


>gi|259047073|ref|ZP_05737474.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein/permease protein [Granulicatella adiacens ATCC
           49175]
 gi|259036123|gb|EEW37378.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein/permease protein [Granulicatella adiacens ATCC
           49175]
          Length = 478

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 103/191 (53%), Gaps = 29/191 (15%)

Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F+ ++GI+  L  T  +        F+  T + +PL+ ++ F+ FG+P    I      
Sbjct: 293 IFASLIGIIFGLIKTSQNSIVQAIAGFYIDTIRGVPLIVLTFFIYFGIPQAFDI------ 346

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                           T+ P F++  I LS   +A+IAEI+R G+ AV +GQ EA ++LG
Sbjct: 347 ----------------TMQP-FVAGVITLSLNASAYIAEIIRGGIQAVDKGQYEACMSLG 389

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + K+ + V+LPQA+R ++P   +Q++  LK++S+   +G A+L   G  II +  Q+ 
Sbjct: 390 LPYSKSMQKVILPQAIRIMVPSFINQFVITLKDTSILSIIGIAELTQTGKVIIARNLQSS 449

Query: 365 EIILIWMFIYL 375
           ++ LI   +YL
Sbjct: 450 QMWLIVGVMYL 460



 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 16/104 (15%)

Query: 60  GIGFLSERAGFEIDQGIVPYTS---DSSYATAIL-----------VGFVNTFWLAFSGMI 105
           G+  L E   +  D+ I  YT+   +++ AT+IL            G  NT  L    +I
Sbjct: 236 GLKKLKESGKY--DEIINKYTTNANENTEATSILGLIKTNWKTLATGLWNTIVLTVVALI 293

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            A++IG + G  + S N +V  I   Y++  R +P +V+ FF+Y
Sbjct: 294 FASLIGIIFGLIKTSQNSIVQAIAGFYIDTIRGVPLIVLTFFIY 337


>gi|261251727|ref|ZP_05944301.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260938600|gb|EEX94588.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 263

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 117/226 (51%), Gaps = 21/226 (9%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+ +    G +     L    +T+  +A    F+ ++G  L+  A +LS  +    G+
Sbjct: 41  VPDYILFFEDGEWWPAELLDGLVVTIKISALSLCFTLLIG--LTTAALKLSDSW---VGR 95

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            +  LYI   +I   P LV I   Y L+F   PV+G             F +  +ALS +
Sbjct: 96  GIANLYIE--VIRNTPLLVQI---YVLYFVFGPVIGL----------DRFATAVLALSLF 140

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ AEI R GL ++P+ Q EAA +LGL        V+LPQ ++  +PPLT++ ++L+K
Sbjct: 141 QGAYTAEIFRGGLNSIPKEQFEAAKSLGLNPFYTFYDVILPQLLQRTLPPLTNEVISLIK 200

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           NSS+   +   DL + G  I+++T    EI      IYLSL++M++
Sbjct: 201 NSSIVSVMAIFDLTTEGRNIVSETAMPFEIWFTVAAIYLSLTLMLS 246


>gi|149187232|ref|ZP_01865530.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148838768|gb|EDL55707.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 264

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 117/236 (49%), Gaps = 23/236 (9%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     L    +T+  +    VF+ + G++ +L  T      +   G+
Sbjct: 43  VPDYLAFYEDGQWWPAELLEGLVVTLKISGLALVFTLLFGLITALLKTS-----NSVVGR 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +   Y+    I   P LV I L Y +    P++G             F +   AL+ + 
Sbjct: 98  GIAHCYVEG--IRNTPLLVQIYLLYFVF--GPIIGL----------DRFSTAVFALALFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI+R+GL ++P+GQ EA  ++GL+       V+LPQ +R  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEILRAGLNSIPKGQFEACRSVGLSRFYTYYDVILPQVVRRTVPPLTNEIVSLIKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNRLN 389
           SS+   +   DL + G  I+++T    EI      I++ + L+LS + A   +RLN
Sbjct: 204 SSIVSVMAIFDLTTEGRNIVSETAMPFEIWFTVAAIYLVLTLTLSALSAWLEHRLN 259


>gi|325275177|ref|ZP_08141144.1| glutamate/aspartate ABC transporter permease [Pseudomonas sp.
           TJI-51]
 gi|324099664|gb|EGB97543.1| glutamate/aspartate ABC transporter permease [Pseudomonas sp.
           TJI-51]
          Length = 248

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 77/128 (60%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S+ I L  +TAA + E VR+G+ A+PRGQ  AA A+G +  +    VLLPQA R IIPP
Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPRGQESAARAMGFSLPQIYTNVLLPQAYRIIIPP 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M 
Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231

Query: 387 RLNAKIAL 394
            +  K+A+
Sbjct: 232 MVEKKVAV 239



 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 33/49 (67%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++G+++G  R   N+LV+ I  +YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 45  LLGSVLGVMRTVPNRLVSGIATIYVELFRNVPLLVQLFIWYFLVPDLLP 93


>gi|68535732|ref|YP_250437.1| glutamate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|68263331|emb|CAI36819.1| glutamate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
          Length = 312

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 81/127 (63%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++   L+ Y  + IAE +RSG+ ++PRGQ EAAIALGL+HR++  L+LLPQA+ +++P
Sbjct: 142 FSAVVFGLTMYNGSVIAETLRSGIQSLPRGQREAAIALGLSHRQSINLILLPQAVAAMLP 201

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + SQ +  LK+S+L   +GF ++V  G  +    G  I  +L+   I + +++++A   
Sbjct: 202 AIISQMVIALKDSALGYMIGFVEVVRSGRQLGEYYGAMIPALLLIAVIMIVINMILAKLA 261

Query: 386 NRLNAKI 392
            R+  ++
Sbjct: 262 ERIEIQL 268



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+E+  FE  +    +   S++ T I+ G ++T   A   ++ A  IG L+G GRLS + 
Sbjct: 42  LNEKGQFESAKWSF-FLEGSTWTTYIIPGLISTIGAAVVSIVLAMAIGALLGVGRLSPSA 100

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK--SVLSVLP 157
            V WIC + VE FR+IP LV++ F Y   S+L ++P
Sbjct: 101 PVRWICGIIVEFFRSIPVLVLMLFAYAVFSLLQLVP 136


>gi|260578183|ref|ZP_05846103.1| glutamate transport system permease protein GluD [Corynebacterium
           jeikeium ATCC 43734]
 gi|258603722|gb|EEW16979.1| glutamate transport system permease protein GluD [Corynebacterium
           jeikeium ATCC 43734]
          Length = 318

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 81/127 (63%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++   L+ Y  + IAE +RSG+ ++PRGQ EAAIALGL+HR++  L+LLPQA+ +++P
Sbjct: 148 FSAVVFGLTMYNGSVIAETLRSGIQSLPRGQREAAIALGLSHRQSINLILLPQAVAAMLP 207

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + SQ +  LK+S+L   +GF ++V  G  +    G  I  +L+   I + +++++A   
Sbjct: 208 AIISQMVIALKDSALGYMIGFVEVVRSGRQLGEYYGAMIPALLLIAVIMIVINMILAKLA 267

Query: 386 NRLNAKI 392
            R+  ++
Sbjct: 268 ERIEIQL 274



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+E+  FE  +    +   S++ T I+ G ++T   A   ++ A  IG L+G GRLS + 
Sbjct: 48  LNEKGQFESAKWSF-FLEGSTWTTYIIPGLISTIGAAVVSIVLAMAIGALLGVGRLSPSA 106

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK--SVLSVLP 157
            V WIC + VE FR+IP LV++ F Y   S+L ++P
Sbjct: 107 PVRWICGIIVEFFRSIPVLVLMLFAYAVFSLLQLVP 142


>gi|297582812|ref|YP_003698592.1| polar amino acid ABC transporter inner membrane subunit [Bacillus
           selenitireducens MLS10]
 gi|297141269|gb|ADH98026.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           selenitireducens MLS10]
          Length = 227

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 20/208 (9%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I + S VLG+V+SLF    R S H + +    +   YIS   + G+P L+++   + L+F
Sbjct: 32  ISLISMVLGLVMSLFLALARQSGHLYLQIPARM---YIS--FMRGVPILIIL---FMLYF 83

Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P +G +F  +  + +   F S         AA++AEI RS + AVP+GQ EAA +LGL
Sbjct: 84  GFPYIGIEFTAVNAAIIGFSFNS---------AAYMAEINRSAIDAVPKGQWEAARSLGL 134

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           ++ K  R V+LPQA R  +PPLT+  L+L+K SSLA  +   ++  +   +  +    + 
Sbjct: 135 SYTKMMRQVVLPQASRIAVPPLTNVLLDLIKASSLAAMITVPEIFQMSRIVAGREMDYMT 194

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + ++   IY  +  ++    N L  + A
Sbjct: 195 MFILVAMIYWVICTLMTQLQNYLEKRFA 222


>gi|146310838|ref|YP_001175912.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145317714|gb|ABP59861.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 225

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 80/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y ++S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFAISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 10/70 (14%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD--- 160
           GT++   RLS+ K  AW    YV VFR+IP ++V+ + Y       ++VL + P  D   
Sbjct: 38  GTILAVMRLSSFKPFAWFATAYVNVFRSIPLVMVLLWFYLIVPGLLQNVLGLSPKADIRL 97

Query: 161 HSIVLPFGMF 170
            S ++ F MF
Sbjct: 98  ISAMVAFSMF 107


>gi|226314122|ref|YP_002774018.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226097072|dbj|BAH45514.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 229

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 19/213 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A   +   V+G+V++ F  R+S     K    +   YI+  +I G P +V I +
Sbjct: 19  LTVQLTAVALILGCVVGLVIAFF--RIS---DSKALNYIAHTYIT--VIRGTPLIVQICI 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y         G  N +   T+S +F +  IAL+ +  A+IAEI R  + ++ RGQMEA+
Sbjct: 72  LY--------FGLANMV---TLS-QFWAGAIALAVHNGAYIAEIFRGSIQSIDRGQMEAS 119

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG+++  A R ++LPQA R  IP L +Q++  LK+SSL   VG  DL   G       
Sbjct: 120 RSLGMSYPLAMRRIILPQAFRRAIPSLGNQFIIGLKDSSLVAYVGMQDLWGTGLGEAASN 179

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + +E  ++    YL L ++ + F+N+L A++A
Sbjct: 180 YKQLETYMVVGLYYLVLIMIFSYFVNKLEARLA 212


>gi|190893811|ref|YP_001980353.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190699090|gb|ACE93175.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 271

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 81/127 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R I PPL++ 
Sbjct: 145 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 204

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++L + R+  
Sbjct: 205 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRIEK 264

Query: 391 KIALKEK 397
           K+  K +
Sbjct: 265 KMKQKPR 271


>gi|161525881|ref|YP_001580893.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|160343310|gb|ABX16396.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
          Length = 226

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 69/108 (63%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 93  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 152

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       I ++ G  +E++L
Sbjct: 153 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVL 200



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +  
Sbjct: 20  GAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 79

Query: 152 VLSVL 156
           V  VL
Sbjct: 80  VPQVL 84


>gi|206561693|ref|YP_002232458.1| glutamate/aspartate transport system permease [Burkholderia
           cenocepacia J2315]
 gi|198037735|emb|CAR53679.1| glutamate/aspartate transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 225

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 77/132 (58%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+++P L +Q + L +++SL   +  AD       I ++ G  +E++L     Y  +  +
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSL 211

Query: 381 IALFMNRLNAKI 392
            +  +  L  K+
Sbjct: 212 ASALVKGLQKKV 223



 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +  
Sbjct: 19  GAVVTFKITLIAIVVGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 78

Query: 152 VLSVL 156
           V  VL
Sbjct: 79  VPQVL 83


>gi|291485151|dbj|BAI86226.1| glutamine ABC transporter, integral membrane protein [Bacillus
           subtilis subsp. natto BEST195]
          Length = 216

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 80/122 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AFIAE +R+G+ +V +GQMEAA + G T+ +A   ++LPQA++ ++PPL +Q
Sbjct: 91  VALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFTYSQAMLHIILPQAIKIVMPPLGNQ 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +LNL+KNSS+   V   DL+     + + T    ++ +     YL L+I +++ +N L  
Sbjct: 151 FLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDVYIFVALFYLVLTIPLSIGVNYLEK 210

Query: 391 KI 392
           ++
Sbjct: 211 RL 212



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 31/58 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF +T   +   +  + ++G  V   R++  K + W+  VYVE  RNIP L++ F  Y
Sbjct: 16  GFYHTLLASVIALAGSFVLGVTVAVMRITVFKPLQWLGTVYVEFIRNIPLLLITFVFY 73


>gi|224824054|ref|ZP_03697162.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224603473|gb|EEG09648.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 264

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 79/133 (59%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S  +  ++S+ + L+ +TAA + E VR+G+ A+P+GQ  AA+A+G +  +  R VLLPQA
Sbjct: 123 SPTTSAYISVVVCLALFTAARVCEQVRTGIQALPKGQSHAALAMGFSRVQIYRHVLLPQA 182

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R IIPPLT+++L + KNSS+A  +G  +L++        T    E   +   IY  L++
Sbjct: 183 FRIIIPPLTTEFLAIFKNSSVASLIGLMELLAQTKQTAEFTANIFEAFTLATVIYFVLNM 242

Query: 380 MIALFMNRLNAKI 392
            +   M R+  ++
Sbjct: 243 SLMKLMGRVEDRL 255


>gi|115351569|ref|YP_773408.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115281557|gb|ABI87074.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 240

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/96 (47%), Positives = 65/96 (67%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ ++ LS YTAAF+AE   +GL  V   Q +AA ALGLT  ++ R V+LPQA+R  +
Sbjct: 106 EFVAGWVGLSAYTAAFVAEECEAGLRGVRGAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P L  QY+NL+KNSSLA+A+G A+L      +  +T
Sbjct: 166 PSLFGQYMNLVKNSSLAMAIGVAELSYASRQVETET 201


>gi|296158006|ref|ZP_06840839.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891774|gb|EFG71559.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 222

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 83/129 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +
Sbjct: 87  PAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+     
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYLAIALVYLVLTQATNY 206

Query: 384 FMNRLNAKI 392
            ++R+  ++
Sbjct: 207 ALHRVERRL 215


>gi|206577118|ref|YP_002239698.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Klebsiella pneumoniae 342]
 gi|288936540|ref|YP_003440599.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|206566176|gb|ACI07952.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Klebsiella pneumoniae 342]
 gi|288891249|gb|ADC59567.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 224

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSGAALALGMTHWQSMRLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKTYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|170781633|ref|YP_001709965.1| putative glutamate permease [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156201|emb|CAQ01343.1| putative glutamate permease [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 215

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 9/138 (6%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +AL+ YTA F AE +RSG+ +VP GQ EAA ++GLT  +    V+LPQA+R++
Sbjct: 82  PFMTAAVLALTLYTAPFFAEAIRSGINSVPVGQAEAARSIGLTFSQTLGSVILPQAVRTV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-----YLSLS 378
           IPPL +  + L KN+S+A A    +L +VG  + N  G A+    +W+F+     YL ++
Sbjct: 142 IPPLINVVIALTKNTSIAGAYFIYELFNVGRDVANANGDAV----VWVFVGVAFFYLIIT 197

Query: 379 IMIALFMNRLNAKIALKE 396
           + +    + L  ++A+  
Sbjct: 198 VPLGQLADHLEKRVAVSR 215


>gi|90962414|ref|YP_536330.1| glutamine transport system permease protein [Lactobacillus
           salivarius UCC118]
 gi|90821608|gb|ABE00247.1| Glutamine transport system permease protein [Lactobacillus
           salivarius UCC118]
          Length = 217

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 31/218 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    V SF++G++L +      ++     G      + LPLL I  F  FGLP 
Sbjct: 22  VTLEVSVISIVLSFIIGLILGVIRYVKIKYLSAAVGFLIDIIRNLPLLLIIFFTYFGLPE 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L                       G  ++P  ++   AL  + +A +AEIVRSG+ AVP 
Sbjct: 82  L-----------------------GLRMTP-MLAAVTALVVFESAMLAEIVRSGIQAVPV 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A + GLT+ +A   +++PQA++ +IPPL SQ+++L+K++SLA  +   +L+    
Sbjct: 118 GQMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQ 177

Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I +Q T   + + L+   +Y  +   ++L   RL  +
Sbjct: 178 IIYSQNTTYMVPMYLMIAVMYFIVCYCLSLVARRLEKR 215


>gi|59801354|ref|YP_208066.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|194098395|ref|YP_002001453.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           NCCP11945]
 gi|239998800|ref|ZP_04718724.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           35/02]
 gi|240014284|ref|ZP_04721197.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           DGI18]
 gi|240016719|ref|ZP_04723259.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           FA6140]
 gi|240080912|ref|ZP_04725455.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           FA19]
 gi|240112729|ref|ZP_04727219.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           MS11]
 gi|240115477|ref|ZP_04729539.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           PID18]
 gi|240117771|ref|ZP_04731833.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           PID1]
 gi|240121847|ref|ZP_04734809.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           PID24-1]
 gi|240123327|ref|ZP_04736283.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           PID332]
 gi|240125576|ref|ZP_04738462.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|240128029|ref|ZP_04740690.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|254493586|ref|ZP_05106757.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae 1291]
 gi|260440713|ref|ZP_05794529.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           DGI2]
 gi|268594645|ref|ZP_06128812.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02]
 gi|268597029|ref|ZP_06131196.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19]
 gi|268598794|ref|ZP_06132961.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae MS11]
 gi|268601152|ref|ZP_06135319.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID18]
 gi|268603471|ref|ZP_06137638.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID1]
 gi|268681951|ref|ZP_06148813.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID332]
 gi|268684165|ref|ZP_06151027.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae SK-92-679]
 gi|268686419|ref|ZP_06153281.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae SK-93-1035]
 gi|291044023|ref|ZP_06569739.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|293399215|ref|ZP_06643380.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|59718249|gb|AAW89654.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|193933685|gb|ACF29509.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           NCCP11945]
 gi|226512626|gb|EEH61971.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae 1291]
 gi|268548034|gb|EEZ43452.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02]
 gi|268550817|gb|EEZ45836.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19]
 gi|268582925|gb|EEZ47601.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae MS11]
 gi|268585283|gb|EEZ49959.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID18]
 gi|268587602|gb|EEZ52278.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID1]
 gi|268622235|gb|EEZ54635.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID332]
 gi|268624449|gb|EEZ56849.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae SK-92-679]
 gi|268626703|gb|EEZ59103.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae SK-93-1035]
 gi|291012486|gb|EFE04475.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|291610629|gb|EFF39739.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|317164090|gb|ADV07631.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 248

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAACSLGLTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTAALIYLLMTTFLGWIFLRLEK 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|302185658|ref|ZP_07262331.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
 gi|330950013|gb|EGH50273.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 248

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RVIEKKVAV 239



 Score = 43.5 bits (101), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +G+++G  R   N+LV+ I  VYVE+FRN+P LV +F  Y  V  +LP
Sbjct: 46  LGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93


>gi|298369218|ref|ZP_06980536.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283221|gb|EFI24708.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 248

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 76/121 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I+EI R+G+ ++ +GQMEAA +LGL +R+A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYISEIFRAGIQSIDKGQMEAARSLGLNYRQAMRYVVLPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G  +L++V   I  +     E +     IYL L+  +     RL  
Sbjct: 182 FITLLKDSSLLSVIGVVELLAVQKAISGRYSVYEEPLYTVALIYLVLTTCLGWMFLRLEN 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|270264105|ref|ZP_06192372.1| transporter [Serratia odorifera 4Rx13]
 gi|270041754|gb|EFA14851.1| transporter [Serratia odorifera 4Rx13]
          Length = 237

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/96 (46%), Positives = 64/96 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +  L+ Y+ AFIAE +RSG+  V  GQ  AA ALGLT  +A R V+LPQA++   
Sbjct: 105 EFLAGFFGLTLYSTAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAF 164

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PPL  QY+N++KNSSL +A+G A+L      +  +T
Sbjct: 165 PPLLGQYMNVIKNSSLTMAIGVAELSYASRQVETET 200



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T WL+    + AT++G ++ A R S+ + + W+   Y  +FRN P LV +FF Y +
Sbjct: 18  GFLLTLWLSACASLAATLLGLILTAMRDSSLRPLRWLAVGYSSLFRNTPLLVQLFFWYFA 77

Query: 152 VLSVLP 157
              +LP
Sbjct: 78  AGQILP 83


>gi|302537786|ref|ZP_07290128.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
 gi|302446681|gb|EFL18497.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
          Length = 214

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 73/111 (65%), Gaps = 5/111 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VP+GQ EAA +LG++  +    V+LPQA RS+IPP+ S 
Sbjct: 89  LALGCYTSAFICEALRSGINTVPKGQGEAARSLGMSFGQTLGTVVLPQAFRSVIPPIGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + L KNS++A A    +L+    T +N+ G +I    IW F+++++  +I
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSI----IWTFVWIAVGYLI 194


>gi|152998036|ref|YP_001342871.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150838960|gb|ABR72936.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 268

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 118/215 (54%), Gaps = 20/215 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIAL 240
           F+ +  LG++++L     SRH        F+ +  + +P+L +  ++ F G P +V +  
Sbjct: 56  FILASFLGLLIAL--AGFSRHRILREFARFYVEVFRGIPVLVLLFYIAFVGAPEMVKL-- 111

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQM 297
            Y      P+  +  +I  +  + +F  L+   IAL+   +AFIAE+ R+G+  V +GQ+
Sbjct: 112 -YNWALQIPI--EAGWIEEAR-TRDFTLLWRAIIALAISYSAFIAEVFRAGIQEVGKGQI 167

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALGL++    RL+ LPQAMR I+PPL +  + ++K+S+L   +G  D+  +G    
Sbjct: 168 EAAKALGLSNWHRFRLITLPQAMRKILPPLGNDLVAMIKDSALVSVLGVQDITQLGKVFS 227

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + T Q  E   +  F+YL L++ ++L +    A +
Sbjct: 228 SSTFQFFETYNVVAFMYLVLTLSLSLMIRAFEAHL 262



 Score = 44.7 bits (104), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 81  SDSSY---ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +D SY   A A+  G + T  + F+  I A+ +G L+     S ++++    R YVEVFR
Sbjct: 30  ADESYQRIAGALSEGLLTTIGVTFTAFILASFLGLLIALAGFSRHRILREFARFYVEVFR 89

Query: 138 NIPPLVVIFFL 148
            IP LV++F++
Sbjct: 90  GIPVLVLLFYI 100


>gi|148545553|ref|YP_001265655.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148509611|gb|ABQ76471.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 229

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 17/205 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   V   +L I L +   R SRH++ +   A+P  YI  F   G P LV + L
Sbjct: 19  LTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLFL 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  L A+P+G+
Sbjct: 72  VYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQAIPKGE 125

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALG++  K    ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  TI
Sbjct: 126 IEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTI 185

Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381
           I +T   +EI       YL +S M+
Sbjct: 186 IARTYLPVEIFFAAGVFYLVISFML 210


>gi|238761655|ref|ZP_04622630.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
 gi|238700169|gb|EEP92911.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
          Length = 255

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 80/133 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L+   +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLVISVVYWVITFILSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMETRFGKSDSR 254


>gi|226938963|ref|YP_002794034.1| Polar amino acid ABC transporter, inner membrane subunit
           [Laribacter hongkongensis HLHK9]
 gi|226713887|gb|ACO73025.1| Polar amino acid ABC transporter, inner membrane subunit
           [Laribacter hongkongensis HLHK9]
          Length = 219

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 77/127 (60%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S YI  + + AA+  EI+R+G+ ++PRGQ+ A  A+G T+ +  R V+LPQA R+++P L
Sbjct: 91  SAYITFAIFEAAYFCEIIRAGIQSIPRGQVFAGQAMGFTYGQNMRYVILPQAFRNVVPLL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   VG  DL+     + N+    +E+ +    IY  +S  ++  + R
Sbjct: 151 LTQIIILFQDTSLVYVVGATDLLGAASKVANRDNTLVEMYVAVAVIYFVISFTLSRLVKR 210

Query: 388 LNAKIAL 394
           L+ +IA+
Sbjct: 211 LHTRIAI 217


>gi|225375503|ref|ZP_03752724.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM
           16841]
 gi|225212638|gb|EEG94992.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM
           16841]
          Length = 414

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 115/209 (55%), Gaps = 24/209 (11%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243
           I +F+ ++GIVL  F   + R  H++ G      A+   Y++  +I G P ++ + + Y 
Sbjct: 216 ITIFAVMIGIVLG-FLIAIVRTSHDRNGGLGILNAVCKAYLT--IIRGTPVMIQLLIIYY 272

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F             S  + + +   IA    +AA++AEIVRSG++AV  GQ EA  +L
Sbjct: 273 VIFQ------------SINTGKIVVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 320

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +R+    ++LPQA+++I+P L +++++LLK +S++  +G  DL   G  I + T +A
Sbjct: 321 GLNYRQTMTTIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLTKGGDIIRSVTYEA 380

Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRL 388
               I + +I++ + + LS  + +   +L
Sbjct: 381 FMPLIAVAVIYLLMVVGLSKAVGVLERKL 409


>gi|189349397|ref|YP_001945025.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221202315|ref|ZP_03575349.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD2M]
 gi|221209129|ref|ZP_03582123.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD2]
 gi|221214520|ref|ZP_03587491.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD1]
 gi|189333419|dbj|BAG42489.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221165777|gb|EED98252.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD1]
 gi|221171033|gb|EEE03486.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD2]
 gi|221177889|gb|EEE10302.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD2M]
 gi|325525015|gb|EGD02927.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 225

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 69/108 (63%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       I ++ G  +E++L
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVL 199



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +  
Sbjct: 19  GAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFFLI 78

Query: 152 VLSVL 156
           V  VL
Sbjct: 79  VPQVL 83


>gi|330989514|gb|EGH87617.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 248

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVEVFRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEVFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  V  +LP
Sbjct: 78  LVQLFIWYFLVPDLLP 93


>gi|66047136|ref|YP_236977.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257843|gb|AAY38939.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 248

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RAIEKKVAV 239



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   N+LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPNRLVSGIAAVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  V  +LP
Sbjct: 78  LVQLFIWYFLVPDLLP 93


>gi|291542753|emb|CBL15863.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ruminococcus bromii L2-63]
          Length = 508

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 80/123 (65%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    +AA++AEIVRSG++AV  GQ EA+ +LG  +R+   +V+LPQA+++++P L ++
Sbjct: 382 IAFGMNSAAYVAEIVRSGIMAVDIGQTEASRSLGFNNRQTMTMVVLPQAIKNVLPALGNE 441

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
            + LLK +S+A  V  AD+  +G  I ++T +A    I + LI++ I L LS ++  F  
Sbjct: 442 IITLLKETSVAGYVALADITYIGNMIRSRTYEAFFPLITVALIYLVIVLVLSYILRRFER 501

Query: 387 RLN 389
           RL 
Sbjct: 502 RLK 504


>gi|55821172|ref|YP_139614.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823085|ref|YP_141526.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55737157|gb|AAV60799.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739070|gb|AAV62711.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 232

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 66/92 (71%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+ + P  ++  + +  YT A+I+EI+R+G+ AVP+GQ EAA++ G T+    R+++LPQ
Sbjct: 95  GNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFTYADTMRIIILPQ 154

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +I+PPLT+Q +NL+KN+S    +  AD++
Sbjct: 155 AVHTILPPLTNQVVNLIKNTSTVAIISGADIM 186



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 7/77 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV--VIFFLY 149
           GF+ T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV  V+ F  
Sbjct: 29  GFLYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVVFYG 88

Query: 150 KSVLSVLPIPDHSIVLP 166
            S+L+     D ++++P
Sbjct: 89  ISILT-----DGNVMIP 100


>gi|298488719|ref|ZP_07006748.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156792|gb|EFH97883.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 248

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRLIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  V  +LP
Sbjct: 78  LVQLFIWYFLVPDLLP 93


>gi|187780209|ref|ZP_02996682.1| hypothetical protein CLOSPO_03805 [Clostridium sporogenes ATCC
           15579]
 gi|187773834|gb|EDU37636.1| hypothetical protein CLOSPO_03805 [Clostridium sporogenes ATCC
           15579]
          Length = 222

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 104/177 (58%), Gaps = 17/177 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L +  +T+       + + +LG++L++      + FH  +      +YIS F   G P L
Sbjct: 17  LKYAHITLSIAILSMIIAVLLGVILAVIRMYKVKIFHRISE-----IYISFFR--GTPIL 69

Query: 236 VLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + L Y   +  P ++  F  I      P +M++ IALS   +A++AEI+R  ++++ +
Sbjct: 70  IQLFLFY---YGLPQIIPSFKEI------PAYMAVVIALSMNCSAYMAEIIRGAIMSIDK 120

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           GQMEA+++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG A+++S
Sbjct: 121 GQMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILS 177


>gi|157145939|ref|YP_001453258.1| hypothetical protein CKO_01692 [Citrobacter koseri ATCC BAA-895]
 gi|157083144|gb|ABV12822.1| hypothetical protein CKO_01692 [Citrobacter koseri ATCC BAA-895]
          Length = 259

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 73/128 (57%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  +T+AF+ E + SGL AV  GQ EAA++ G +     R +LLPQ + 
Sbjct: 109 LTPEFLCSAWGLGVFTSAFLVEEIASGLQAVSAGQREAAVSQGFSAWTTLRHILLPQGLA 168

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL   I++
Sbjct: 169 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLLTGIVL 228

Query: 382 ALFMNRLN 389
            L + RLN
Sbjct: 229 GLLLTRLN 236


>gi|20807014|ref|NP_622185.1| ABC-type amino acid transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
 gi|20515499|gb|AAM23789.1| ABC-type amino acid transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
          Length = 220

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 83/131 (63%), Gaps = 4/131 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +   AL+  ++A++AEI+R+G+ AV  GQ EAA +LG+TH  A R V++PQA+++I
Sbjct: 86  PAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379
           +P L ++++ +LK S++   +GFADL      I + T +  E  +I   IY    L+ S 
Sbjct: 146 LPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSVTYRYFEPYIIIAAIYFVMTLTFSK 205

Query: 380 MIALFMNRLNA 390
           +++LF  RL A
Sbjct: 206 LLSLFERRLRA 216


>gi|317407541|gb|EFV87491.1| ABC-type amino acid transport system [Achromobacter xylosoxidans
           C54]
          Length = 321

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 9/171 (5%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI GLP   L++L +      P++       G T+    +   IAL+ ++AA++AE++R 
Sbjct: 156 LIRGLP---LVSLLFMASIVLPIM----LPAGMTID-SLLRAGIALTVFSAAYLAEVIRG 207

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL A+P GQ EA+ ALGL+  + TRLV+LPQA+R +I PLT+  + ++KN+SL + VG  
Sbjct: 208 GLQAIPPGQAEASRALGLSWWQMTRLVVLPQALRKVIAPLTNTAIVMIKNTSLVLIVGLF 267

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           DL+S G   +         +  ++FI  S+   I   ++R +  +  + KK
Sbjct: 268 DLLSSGRAALTDPAWPTPYVETYLFIA-SIYFCICFGLSRYSMWLEHRYKK 317


>gi|312970728|ref|ZP_07784909.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1827-70]
 gi|310337377|gb|EFQ02515.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1827-70]
          Length = 224

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 80/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++  GQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISLGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   F+Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLL 215

Query: 385 MNRLNAKIA 393
           ++ L  + A
Sbjct: 216 VSYLKRRTA 224



 Score = 40.0 bits (92), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   V+W  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKNDIRLISAMVAFSMF 107


>gi|254303824|ref|ZP_04971182.1| amino acid ABC superfamily ATP binding cassette transporter
           membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324016|gb|EDK89266.1| amino acid ABC superfamily ATP binding cassette transporter
           membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 236

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 87/147 (59%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQMEA  ALGL++ +
Sbjct: 90  ILANLIFVGVLRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA+++I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 150 TMRKIIVPQAIKNILPALVSEFITLLKETSIIGFIGGVDLLRSASIITSQTYRGVEPLLA 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +   FM ++   + + +
Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|330811360|ref|YP_004355822.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379468|gb|AEA70818.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 248

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ + L  +TAA + E VR+G+ A+PRGQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMVEKKVAV 239



 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
           N   G+ F S   G E            +Y    + G   T  +A    I A ++G+++G
Sbjct: 4   NWDWGVFFKSTGVGSE------------TYLDWYVTGLGWTIAIAVVAWIIALLLGSVLG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             R   N+LV+ I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 52  VMRTVPNRLVSGIATCYVELFRNVPLLVQLFIWYFLVPDLLP 93


>gi|256027814|ref|ZP_05441648.1| amino acid ABC transporter permease [Fusobacterium sp. D11]
 gi|289765767|ref|ZP_06525145.1| amino acid transport system permease [Fusobacterium sp. D11]
 gi|289717322|gb|EFD81334.1| amino acid transport system permease [Fusobacterium sp. D11]
          Length = 236

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 87/147 (59%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQMEA  ALGL++ +
Sbjct: 90  ILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA+++I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 150 TMRKIIVPQAIKNILPALVSEFIALLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +   FM ++   + + +
Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|156932773|ref|YP_001436689.1| hypothetical protein ESA_00563 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531027|gb|ABU75853.1| hypothetical protein ESA_00563 [Cronobacter sakazakii ATCC BAA-894]
          Length = 256

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 77/133 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ ALG+   K  R V+LPQA R I+P
Sbjct: 124 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRALGMPWWKTMRKVILPQAFRRILP 183

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++  +
Sbjct: 184 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSQLV 243

Query: 386 NRLNAKIALKEKK 398
            RL  +    + +
Sbjct: 244 ARLEKRFGKSDSR 256


>gi|170724087|ref|YP_001751775.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169762090|gb|ACA75406.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 229

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 17/206 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   V   +L I L +   R SRH++ +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---ALPFSYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  L ++P+G
Sbjct: 71  LVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQSIPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  K    ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMI 381
           II +T   +EI       YL +S ++
Sbjct: 185 IIARTYLPVEIFFAAGVFYLVISFLL 210


>gi|70732198|ref|YP_261954.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68346497|gb|AAY94103.1| probable permease of ABC transporter PA1340 [Pseudomonas
           fluorescens Pf-5]
          Length = 223

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 95/178 (53%), Gaps = 17/178 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PLL + T+    +P      L++    D P+               F S  +A   +
Sbjct: 63  RSIPLLLVITWFYLAVP----FVLRWITGEDTPI-------------GAFTSCIVAFMMF 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+  EIVR+G+ ++P+GQM AA ALG+++ +  RL++LPQA R + P L  Q + L +
Sbjct: 106 EAAYFCEIVRAGVQSIPKGQMGAAQALGMSYGQTMRLIILPQAFRKMTPLLLQQSIILFQ 165

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL   VG  D ++   +  +  G++ E ++I   +Y ++S   +L + RL  + A+
Sbjct: 166 DTSLVYTVGLVDFLNASRSSGDIIGRSNEFLIIAGLVYFTISFAASLLVKRLQKRFAV 223



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L   G++   I+GTL+   RLS NKL++ +   YV  FR+IP L+VI + Y +
Sbjct: 18  GMLMTLKLMVMGVVGGIILGTLLALMRLSHNKLLSNLAGAYVNYFRSIPLLLVITWFYLA 77

Query: 152 VLSVL 156
           V  VL
Sbjct: 78  VPFVL 82


>gi|317402647|gb|EFV83205.1| amino acids ABC transporter [Achromobacter xylosoxidans C54]
          Length = 233

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 14/159 (8%)

Query: 237 LIALKYQLHFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIA 282
           LIAL    H + P+L    F + G   + P            EF+   IA+    +A++ 
Sbjct: 58  LIALYVAFHRNVPMLVHILFWYFGVPALLPQVATDWLNTHGSEFILSCIAIGLVMSAYVC 117

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RS +  +P GQ+EAA ALGL   +  R V+LPQA R  IPPL +Q L L+KN+SLA+
Sbjct: 118 EDLRSAVRGIPPGQVEAARALGLGFLRTMRCVVLPQAFRIAIPPLLNQTLLLVKNTSLAM 177

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           A+G A+L + G  I N T +  E   +   IYL LS +I
Sbjct: 178 AIGVAELTAAGREIENYTFRTFEAYAVVTAIYLLLSFLI 216



 Score = 39.7 bits (91), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 39/76 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   +L G V T  LA    I A ++G+L+   RL+ + +   +  +YV   RN+P 
Sbjct: 12  QGEYPAWLLRGLVTTLALAGLAWILAFLVGSLLAVIRLTGSPVANALIALYVAFHRNVPM 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV I F Y  V ++LP
Sbjct: 72  LVHILFWYFGVPALLP 87


>gi|104773643|ref|YP_618623.1| glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422724|emb|CAI97351.1| Glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 222

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 115/213 (53%), Gaps = 15/213 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +    + SFV+G+ L L   R +R    KT +   ++ +   +I  LP L++I  
Sbjct: 22  VTIEVSVISIILSFVIGLALGLI--RFTR-IDAKTTRISKVVGVIIDIIRNLPLLLIIFF 78

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F  PV+G             F +  IA+  + +A IAE+VRSG++AV  GQME A
Sbjct: 79  SY---FGLPVMG--------IRVDAFQASVIAMVVFESAMIAEVVRSGIMAVDPGQMEGA 127

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359
            + G+T+ +A   V+LPQA+  +IP L SQ+++L+K++SLA  +   +L+     I NQ 
Sbjct: 128 RSNGMTYMQAMTHVVLPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEIIYNQN 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T   I + L    +Y  +   ++ F N L+ +I
Sbjct: 188 TNYMIPMYLAVAVMYFIICFALSSFANYLSKRI 220


>gi|260599090|ref|YP_003211661.1| hypothetical protein CTU_32980 [Cronobacter turicensis z3032]
 gi|260218267|emb|CBA33210.1| hypothetical protein CTU_32980 [Cronobacter turicensis z3032]
          Length = 268

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 77/133 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ ALG+   K  R V+LPQA R I+P
Sbjct: 136 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRALGMPWWKTMRKVILPQAFRRILP 195

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++  +
Sbjct: 196 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSQLV 255

Query: 386 NRLNAKIALKEKK 398
            RL  +    + +
Sbjct: 256 ARLEKRFGKSDSR 268


>gi|296126896|ref|YP_003634148.1| polar amino acid ABC transporter, inner membrane subunit
           [Brachyspira murdochii DSM 12563]
 gi|296018712|gb|ADG71949.1| polar amino acid ABC transporter, inner membrane subunit
           [Brachyspira murdochii DSM 12563]
          Length = 237

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 26/225 (11%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL----PL-----LYI 224
           +GL F   ++ T A   V   VLGI ++L   +LS  +  K  K      PL     LY+
Sbjct: 23  KGLIF---SVGTTALATVIGIVLGIFIALL--QLSEFYPFKNSKKFSNFNPLSKIAFLYV 77

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  ++ G P +V      QL     V+    F+     +P  +   IA    + A++AEI
Sbjct: 78  N--ILRGTPVVV------QLMIWANVV----FVDSLRDTPILIIAAIAFGINSGAYVAEI 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ ++ +GQMEAA ALG+ +  + + +++PQA++ I+PPL S+++ LLK +S+   +
Sbjct: 126 IRAGIQSLDKGQMEAARALGMNYSLSMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFI 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           G  DL+     I +QT + +E ++    IY  L+ + A+FM ++ 
Sbjct: 186 GGVDLLRSANIITSQTYRGVEPLIAVGIIYFILTSIFAMFMRKVE 230


>gi|121608572|ref|YP_996379.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553212|gb|ABM57361.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 260

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 90/157 (57%), Gaps = 12/157 (7%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +T + + L +++ F I+   G P LV I   Y   F  P+L     + G  + P+F +  
Sbjct: 81  RTSRWMVLRWVAGFYIWVIRGTPLLVQILFVY---FALPIL-----VPGLNL-PDFAAAV 131

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AE VR+GL+AVPRGQ EAA ALGL        V+ PQA R  +PPL + 
Sbjct: 132 LALGLNVGAYNAEAVRAGLLAVPRGQTEAAKALGLGRLHVIADVVFPQAFRIALPPLVNN 191

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           ++ LLK+SSLA A+G  +L +VG  I + T Q++  +
Sbjct: 192 FVALLKDSSLAYAIGVVELTNVGYRIQSVTFQSVATL 228


>gi|91785180|ref|YP_560386.1| His/Glu/Gln/Arg/opine ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91689134|gb|ABE32334.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia xenovorans
           LB400]
          Length = 225

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 77/126 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RL++LPQA R+++P L
Sbjct: 99  SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLIVLPQAFRAMVPLL 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   +  AD       I ++ G  IE++L     Y  + ++ +  +  
Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNIEMVLFAGACYFVVCVIASSLVKG 218

Query: 388 LNAKIA 393
           L  K+A
Sbjct: 219 LQKKVA 224


>gi|163848773|ref|YP_001636817.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus aurantiacus J-10-fl]
 gi|222526723|ref|YP_002571194.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus sp. Y-400-fl]
 gi|163670062|gb|ABY36428.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus aurantiacus J-10-fl]
 gi|222450602|gb|ACM54868.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus sp. Y-400-fl]
          Length = 410

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 22/210 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SF LG++L+L      R       +   +LYI   LI G+P   L+ + +      P+
Sbjct: 212 VLSFPLGVLLAL-----GRRSSLPVIRVFCVLYIE--LIRGVP---LVTVLFMGALLLPL 261

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                FI G       +   +A++ ++AA++AE VR GL ++P+GQ+EAA ALGL   + 
Sbjct: 262 -----FIPGGESIDALVRAIVAVTLFSAAYLAENVRGGLQSIPKGQIEAARALGLNVFQT 316

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-------GQA 363
           T L+ LPQA+R+++P L  Q++ L K++SL V +G  DL+     I+ Q        G  
Sbjct: 317 TLLITLPQALRAVVPVLVGQFIALFKDTSLVVIIGLVDLLGAAQNIVGQPQWLGTPGGVW 376

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            E  L+   IY   S  ++    R+  +IA
Sbjct: 377 RETFLVIAAIYWVFSFTMSRISKRIEDQIA 406


>gi|71736319|ref|YP_276040.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257486608|ref|ZP_05640649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|71556872|gb|AAZ36083.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320327103|gb|EFW83117.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330879087|gb|EGH13236.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|331010091|gb|EGH90147.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 248

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  V  +LP
Sbjct: 78  LVQLFIWYFLVPDLLP 93


>gi|239909115|ref|YP_002955857.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239798982|dbj|BAH77971.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 231

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 11/166 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P L+++   +  +F  PV      + G T+ PE  S  IAL  +T+A+IAEIVR+
Sbjct: 68  IIRGTPLLMVV---FWFYFLAPV------VFGHTL-PEAESALIALIVFTSAYIAEIVRA 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQMEAA   GL+H +A   ++LPQA+ ++IP   +Q+++L K++SLA  +G  
Sbjct: 118 GVEALPKGQMEAARGTGLSHFQAMTHIILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVN 177

Query: 348 DLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L      + N+T  A  EI +    +Y  +   +  F   L  +I
Sbjct: 178 ELTKAATQVNNRTLTAPTEIFITIAVLYFVICYCLTEFSRYLERRI 223


>gi|121608199|ref|YP_996006.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552839|gb|ABM56988.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 251

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/126 (42%), Positives = 76/126 (60%), Gaps = 4/126 (3%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +P F  + +AL  +T+A IAE VR+G+  +P GQ  A +A+G T  +  R VLLP A R 
Sbjct: 108 APGFALVVLALGFFTSARIAEQVRAGIQTLPSGQRYAGLAMGFTTLQTYRYVLLPMAFRI 167

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           IIPPLTS+ +N+ KNSS+A AV  A+L         +T + IE+ L       +L I+ A
Sbjct: 168 IIPPLTSEMMNIFKNSSVAFAVSVAELTMFAMQAQEETARGIEVYL----AVTALYIISA 223

Query: 383 LFMNRL 388
           L +NR+
Sbjct: 224 LIINRI 229


>gi|148273186|ref|YP_001222747.1| putative glutamate ABC transporter, permease [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831116|emb|CAN02068.1| putative glutamate ABC transpoter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 215

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 82/138 (59%), Gaps = 9/138 (6%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +AL+ YTA F AE +RSG+ +VP GQ EAA ++GLT  +    V+LPQA+R++
Sbjct: 82  PFMTAAVLALTLYTAPFFAEAIRSGINSVPVGQAEAARSIGLTFSQTLGSVILPQAVRTV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-----YLSLS 378
           IPPL +  + L KN+S+A A    +L +VG  + N  G A+    +W+F+     YL ++
Sbjct: 142 IPPLINVVIALTKNTSIAGAYFIYELFNVGRDVANANGNAV----VWVFVGVAFFYLIIT 197

Query: 379 IMIALFMNRLNAKIALKE 396
           + +    + L  ++A+  
Sbjct: 198 VPLGQLADHLEKRVAVSR 215


>gi|120612709|ref|YP_972387.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120591173|gb|ABM34613.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 243

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 4/132 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + +AL  +T+A IAE VRSG+ A+PRGQ  A +ALG T  +  R VLLP A R I+P
Sbjct: 102 FILVVLALGFFTSARIAEQVRSGIQALPRGQRYAGMALGFTTVQYYRYVLLPMAFRIILP 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ +N+ KNSS+A AV   +L         +T + IEI L        L ++ A  +
Sbjct: 162 PLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEIYL----AVTGLYVVSAFAI 217

Query: 386 NRLNAKIALKEK 397
           NR+ A I  + +
Sbjct: 218 NRIMAFIEKRAR 229



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVF 136
           P     +Y   +L  +  T  +A   ++ A + G+++G  R L  N+ +      +VE+F
Sbjct: 14  PGGDYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNRFLVGFGNAWVELF 73

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHS-----IVLPFGMFLNNR 174
           RNIP LV IF  Y  V ++ P+         +VL  G F + R
Sbjct: 74  RNIPLLVQIFLWYHVVPAIFPVMKSVSGFILVVLALGFFTSAR 116


>gi|330889550|gb|EGH22211.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 248

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +   Y  V  +LP
Sbjct: 78  LVQLLIWYFLVPDLLP 93


>gi|323142729|ref|ZP_08077445.1| putative glutamine ABC transporter permease protein GlnM
           [Succinatimonas hippei YIT 12066]
 gi|322417480|gb|EFY08098.1| putative glutamine ABC transporter permease protein GlnM
           [Succinatimonas hippei YIT 12066]
          Length = 222

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 123/246 (50%), Gaps = 45/246 (18%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTG---- 216
           F +F++     FP L M   A + +      F+F++G++L+L    LSR+   K      
Sbjct: 5   FSLFID----CFPDLMMGLGATLLIAVVSMFFAFIIGMILALMG--LSRYKGLKAIYYSY 58

Query: 217 ----KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + +P+L  + FL FG+  L+ I              QFN I    ++         
Sbjct: 59  VAFIRGVPVLIFALFLFFGVGGLLNI--------------QFNPIVAGIIT--------- 95

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   +AF+AEI R G++AV +GQ+EAA +LG  + +  R ++LPQA+R ++PPL +Q++
Sbjct: 96  LSINASAFLAEIFRGGILAVDKGQIEAARSLGFGYFRTMRYIVLPQALRIMVPPLVNQFI 155

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + LK++S+   +   +L      II +  +  E+     FIY  + ++IA+    +  K 
Sbjct: 156 STLKDTSILSVISVRELTMNSQIIIARNFRPFEVYSYAAFIYFLVILLIAIAAKYIEKK- 214

Query: 393 ALKEKK 398
            + E K
Sbjct: 215 -MNESK 219


>gi|237744915|ref|ZP_04575396.1| amino acid transport system permease [Fusobacterium sp. 7_1]
 gi|260494696|ref|ZP_05814826.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Fusobacterium sp. 3_1_33]
 gi|229432144|gb|EEO42356.1| amino acid transport system permease [Fusobacterium sp. 7_1]
 gi|260197858|gb|EEW95375.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Fusobacterium sp. 3_1_33]
          Length = 236

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 87/147 (59%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQMEA  ALGL++ +
Sbjct: 90  ILANLIFVGALRETPILVIGGIAFGLNSGAYVAEIIRAGIEGLDKGQMEAGRALGLSYSQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA+++I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 150 TMRKIIVPQAIKNILPALVSEFIALLKETSIIGFIGGIDLLRSASIITSQTYRGVEPLLA 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +   FM ++   + + +
Sbjct: 210 VGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|126698331|ref|YP_001087228.1| amino acid ABC transporter permease [Clostridium difficile 630]
 gi|254974369|ref|ZP_05270841.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255091763|ref|ZP_05321241.1| amino acid ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
 gi|255099867|ref|ZP_05328844.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|255305755|ref|ZP_05349927.1| amino acid ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
 gi|255313493|ref|ZP_05355076.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255516181|ref|ZP_05383857.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255649277|ref|ZP_05396179.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|255654801|ref|ZP_05400210.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
 gi|260682448|ref|YP_003213733.1| amino acid ABC transporter permease [Clostridium difficile CD196]
 gi|260686047|ref|YP_003217180.1| amino acid ABC transporter permease [Clostridium difficile R20291]
 gi|306519377|ref|ZP_07405724.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-32g58]
 gi|115249768|emb|CAJ67585.1| ABC-type transport system, aminoacid-family permease [Clostridium
           difficile]
 gi|260208611|emb|CBA61332.1| amino acid ABC transporter, permease protein [Clostridium difficile
           CD196]
 gi|260212063|emb|CBE02647.1| amino acid ABC transporter, permease protein [Clostridium difficile
           R20291]
          Length = 225

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 107/185 (57%), Gaps = 8/185 (4%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLY 270
             K  +A+  +YI   ++ G P LV I   Y + F  P LG +F  + G  +  EF++  
Sbjct: 47  KSKVLRAISSIYIE--VLRGTPLLVQI---YIVWFGLPQLGIRFPMLFG--IPSEFIASA 99

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
            ALS  + A++AEI+RSG+ +V  GQMEA+ +LGL +    R +++PQA+++I+P L ++
Sbjct: 100 FALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K SS+   +G  +++     + N   +A+E +++   IY  ++  ++  +  L  
Sbjct: 160 FITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEK 219

Query: 391 KIALK 395
           K+++ 
Sbjct: 220 KLSVS 224


>gi|241895819|ref|ZP_04783115.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241870862|gb|EER74613.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 217

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 75/121 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ YT+AFIAE VR+G+ AVP+GQ+E A++ GL+  +  R ++LPQA + +IPPL +Q+
Sbjct: 90  GLTLYTSAFIAETVRAGINAVPKGQLEGAMSNGLSWWQGMRYIVLPQAFKLVIPPLGNQF 149

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +NL+KNSS+   V   DL+     I   T       +I    YL L++ ++ +M  L  +
Sbjct: 150 INLIKNSSVLAFVAGLDLMYQANQISQMTFDTFGPFIIVGIFYLILTMPMSYYMRYLETR 209

Query: 392 I 392
           +
Sbjct: 210 L 210



 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 41/76 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+A   L GF  T   +   +I + I+GT      +  NKLV  I R+Y+EV RNIP L
Sbjct: 6   QSHAGEFLTGFGWTIASSILALIGSLILGTAFALMEVVPNKLVNIIGRIYIEVVRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPI 158
           V+  F Y  + +V+ I
Sbjct: 66  VITMFFYVVIANVIKI 81


>gi|229089704|ref|ZP_04220965.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-42]
 gi|228693603|gb|EEL47305.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-42]
          Length = 214

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 30/185 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      V SF++G V+ +        F +  G      + LPLL I  F  F LP 
Sbjct: 21  ITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFTYFALPE 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                LK ++                       ++ +AL+ + AA I+EIVRSGL+++ +
Sbjct: 81  A---GLKLEI---------------------ITAVIVALTIFEAAMISEIVRSGLLSIEK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+    
Sbjct: 117 GQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQ 176

Query: 355 TIINQ 359
            I  Q
Sbjct: 177 IISGQ 181



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|170691133|ref|ZP_02882299.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170144382|gb|EDT12544.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 216

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 68/101 (67%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS Y  A+IAE+ RSG+ AVP+GQ E A  LGL+  +A   V+LPQ  + ++P
Sbjct: 86  FAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVAQILGLSKTQAFFSVILPQTGKIVMP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           PL  QYL+L+K++S+   +G ++L+  G  I+++ G+ +EI
Sbjct: 146 PLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRIGKPVEI 186


>gi|213970849|ref|ZP_03398972.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301384515|ref|ZP_07232933.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060677|ref|ZP_07252218.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302130492|ref|ZP_07256482.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213924372|gb|EEB57944.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 248

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 43.1 bits (100), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGISTAYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  V  +LP
Sbjct: 78  LVQLFIWYFLVPDLLP 93


>gi|254382235|ref|ZP_04997596.1| glutamate transport system permease gluC [Streptomyces sp. Mg1]
 gi|194341141|gb|EDX22107.1| glutamate transport system permease gluC [Streptomyces sp. Mg1]
          Length = 214

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E++RSG+  VP GQ EAA +LG++  +    V+LPQA RS+IPP+ S 
Sbjct: 89  LALGCYTSAFICEVLRSGINTVPTGQGEAARSLGMSFGQTLGSVVLPQAFRSVIPPIGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
            + L KNS++A A    +L+    T +N+ G +I    +W+ + YL +++ I+L  + L 
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSIVWTFVWIAVGYLIITLSISLLFHVLE 207

Query: 390 AK 391
            +
Sbjct: 208 KR 209


>gi|160934032|ref|ZP_02081419.1| hypothetical protein CLOLEP_02894 [Clostridium leptum DSM 753]
 gi|156866705|gb|EDO60077.1| hypothetical protein CLOLEP_02894 [Clostridium leptum DSM 753]
          Length = 244

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 113/202 (55%), Gaps = 18/202 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V    LG+++++       +      K +  LY++  +I G P ++ + + Y + F    
Sbjct: 51  VIGITLGVLIAVVVNAAKANPRLNWAKKICSLYVT--VIRGTPVVLQLMIIYYIIFRSVQ 108

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + Q   +GG           +A    +AA+I+EI+RSG+ ++ RGQMEAA +LGL+  KA
Sbjct: 109 IPQI-VVGG-----------LAFGLNSAAYISEIIRSGIESIDRGQMEAARSLGLSRGKA 156

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIIL- 368
            RL++LPQA+++I+P L ++++ L+K +S+A  +G  DL      + ++T    + +IL 
Sbjct: 157 MRLIILPQAVKNILPALGNEFVTLVKETSVAGYIGLRDLTKASDIVASRTYDYFVPLILA 216

Query: 369 --IWMFIYLSLSIMIALFMNRL 388
             +++ I L L+ ++ +F  RL
Sbjct: 217 ACVYLVIVLGLTKLVRMFERRL 238


>gi|29832943|ref|NP_827577.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29610064|dbj|BAC74112.1| putative polar amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 277

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 25/215 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLIALKYQLHF 246
           FV   VLG+V++L   RLS        + L  +YI  F   GLP L   V + +   L F
Sbjct: 81  FVVGLVLGMVIALM--RLS---SVGPYRWLAGIYIEIFR--GLPALLIFVFVGVAVPLAF 133

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                     I G T    +  + +AL   +AA++AE +R+G+ AVP+GQMEAA +LG +
Sbjct: 134 PG------TEIPGGT----YGKVALALGLVSAAYMAETIRAGIQAVPKGQMEAARSLGFS 183

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   +++PQA R +IPPLT++ + L K+SSL + +G      +L   G  + +QT  
Sbjct: 184 HARAMVSIIIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASQTAN 243

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   IL+    YL +++ +   + RL AK     K
Sbjct: 244 STP-ILVAGLCYLLVTVPLGFVVRRLEAKAGEATK 277



 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 36/73 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I +   NT     SG +   ++G ++   RLS+     W+  +Y+E+FR +P L++
Sbjct: 62  FPDVITLALKNTVLYTMSGFVVGLVLGMVIALMRLSSVGPYRWLAGIYIEIFRGLPALLI 121

Query: 145 IFFLYKSVLSVLP 157
             F+  +V    P
Sbjct: 122 FVFVGVAVPLAFP 134


>gi|283784424|ref|YP_003364289.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
 gi|282947878|emb|CBG87440.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
          Length = 224

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +  + ++   + GT++   RLS+   VAW  +VYV VFR+IP ++V+ + 
Sbjct: 16  LLDGLLITLKITLTAVVVGIVWGTILAVMRLSSFAPVAWFAKVYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       + VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGLLQDVLGLSPKTDIRLISAMVAFSMF 107


>gi|330877359|gb|EGH11508.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 248

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
           N   G+ F S   G E            +Y    + G   T  +A    + A I+G+++G
Sbjct: 4   NWDWGVFFKSTGVGSE------------TYLDWFISGLGWTIAIAVVAWVIALILGSVLG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             R   ++LV+ I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 52  VMRTVPSRLVSGIATAYVEIFRNVPLLVQLFIWYFLVPDLLP 93


>gi|259502421|ref|ZP_05745323.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259169564|gb|EEW54059.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 502

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 22/203 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +  F++GI+ +L     S+  H     ++ + YI    I G P LV I   Y        
Sbjct: 316 ICGFLIGILFALMRLSSSKLLH-----SIAICYIE--FIRGTPMLVQIMFVY-------- 360

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G+ +   P  ++  IA++  + A++AEI+RSG+ ++P GQ EAA +LG+T R
Sbjct: 361 -----FGIGAIIQSMPALVAGIIAVAINSGAYVAEIIRSGIQSLPLGQTEAARSLGMTKR 415

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     +   T + +  + 
Sbjct: 416 QTFRYVIMPQALKNIWPALGNEFITLLKDSSLVSTIGVTELMYQTQLVQADTYKGVLPLF 475

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           I M IY  L+  +   +N    K
Sbjct: 476 ITMMIYFFLTFTLTRILNHFEKK 498


>gi|271967568|ref|YP_003341764.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
 gi|270510743|gb|ACZ89021.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptosporangium roseum DSM 43021]
          Length = 274

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 77/128 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F  L + L+   AA  AEI R+G+++V RGQ EA +A+GLTH +  R+++LPQA R +
Sbjct: 133 PLFWKLVVPLAISNAAAFAEIFRAGILSVERGQSEAGLAVGLTHGQTMRMIVLPQAARRV 192

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P + SQ + LLK++SL   V +A+L+  G  +    G  I+  ++   +YL ++  ++ 
Sbjct: 193 LPSIVSQSVGLLKDTSLGFVVSYAELLYSGKVLATYNGLLIQTYIVVALVYLVVNASLSK 252

Query: 384 FMNRLNAK 391
               L A+
Sbjct: 253 LARTLEAR 260


>gi|218510849|ref|ZP_03508727.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli Brasil 5]
          Length = 271

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 81/127 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R I PPL++ 
Sbjct: 145 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 204

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++L + R+  
Sbjct: 205 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRIEK 264

Query: 391 KIALKEK 397
           K+  K +
Sbjct: 265 KMKQKPR 271


>gi|56478020|ref|YP_159609.1| glutamate/aspartate ABC transporter transmembrane protein
           [Aromatoleum aromaticum EbN1]
 gi|56314063|emb|CAI08708.1| putative ABC transporter protein,probable glutamate/aspartate
           transmembrane subunit [Aromatoleum aromaticum EbN1]
          Length = 247

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YTAA IAE V++G+ ++ RGQ +A +ALGLT  +  R V LP A R ++P +TS+
Sbjct: 111 VGLGLYTAARIAEQVKAGINSLSRGQRDAGLALGLTEWQTYRHVRLPMAYRIVLPAMTSE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +N+ KNS++  AVG  +L      II +T Q  EI ++    Y +L    A  MNRL A
Sbjct: 171 AMNIFKNSAVTYAVGILELYFQYKQIIEKTSQVFEITIVVTLAYFAL----AFLMNRLLA 226

Query: 391 KIALKEK 397
            I  + +
Sbjct: 227 FIERRTR 233


>gi|229588678|ref|YP_002870797.1| glutamate/aspartate ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229360544|emb|CAY47401.1| glutamate/aspartate ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 248

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ + L  +TAA + E VR+G+ A+PRGQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMVEKKVAV 239



 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
           N   G+ F S   G E            +Y    + G   T  +A    I A ++G+++G
Sbjct: 4   NWDWGVFFKSTGVGSE------------TYLDWYIAGLGWTIAIAVVAWIIALLLGSILG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             R   N+LV+ I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 52  VMRTVPNRLVSGIATCYVELFRNVPLLVQLFIWYFLVPDMLP 93


>gi|229015972|ref|ZP_04172933.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1273]
 gi|229022189|ref|ZP_04178739.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1272]
 gi|228739120|gb|EEL89566.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1272]
 gi|228745332|gb|EEL95373.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1273]
          Length = 214

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP    + LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPE---VGLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                               ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQIISGQ 181


>gi|227329656|ref|ZP_03833680.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 247

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 63/85 (74%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++    L+ Y++AFIAE +R+G+  V RGQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 115 EFLAGLAGLTLYSSAFIAEEIRAGIRGVARGQKYAAHALGLTGFQSMRYVVLPQALKIAL 174

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL  QY+N++KNSSL +A+G A+L
Sbjct: 175 PPLLGQYMNIVKNSSLTMAIGVAEL 199



 Score = 36.2 bits (82), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 35/66 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L+ S ++ +T++G L+ A R     ++  +   Y  +FRN P LV +FF Y  
Sbjct: 24  GFLITLGLSLSTIVLSTVLGFLLAAARDGQIHVLRGVVVAYSSLFRNTPLLVQLFFWYFG 83

Query: 152 VLSVLP 157
              + P
Sbjct: 84  AGQLFP 89


>gi|28871314|ref|NP_793933.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28854565|gb|AAO57628.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|330966687|gb|EGH66947.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331015652|gb|EGH95708.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 248

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 43.5 bits (101), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 12/102 (11%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
           N   G+ F S   G E            +Y    + G   T  +A    I A I+G+++G
Sbjct: 4   NWDWGVFFKSTGVGSE------------TYLDWFISGLGWTIAIAVVAWIIALILGSVLG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             R   ++LV+ I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 52  VMRTVPSRLVSGIATAYVEIFRNVPLLVQLFIWYFLVPDLLP 93


>gi|330954114|gb|EGH54374.1| glutamine ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 233

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 4/151 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   I  +  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLSENTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                + N T +  E  L+   +YL++S+M+
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAISLML 216


>gi|91778080|ref|YP_553288.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91690740|gb|ABE33938.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 222

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 83/129 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +
Sbjct: 87  PAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSAGQAMRAIILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+     
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYLAIALVYLVLTQATNY 206

Query: 384 FMNRLNAKI 392
            ++R+  ++
Sbjct: 207 ALHRVERRL 215


>gi|241204560|ref|YP_002975656.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858450|gb|ACS56117.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 224

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 64/94 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+   A FI EIV +G+ AVP GQ+EAA+A GL+  +  R V+LPQAMR ++P
Sbjct: 89  FSAGIIALTNLAACFICEIVAAGIRAVPTGQIEAALASGLSRWQRMRQVVLPQAMRIVLP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PL  QY+ L+K+SS+  A+G  DL  VG  ++ +
Sbjct: 149 PLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQR 182


>gi|161525882|ref|YP_001580894.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189349396|ref|YP_001945024.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221202316|ref|ZP_03575350.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD2M]
 gi|221209130|ref|ZP_03582124.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD2]
 gi|221214521|ref|ZP_03587492.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD1]
 gi|160343311|gb|ABX16397.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189333418|dbj|BAG42488.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221165778|gb|EED98253.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD1]
 gi|221171034|gb|EEE03487.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD2]
 gi|221177890|gb|EEE10303.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD2M]
          Length = 246

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 75/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FTASIVCLGLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M
Sbjct: 171 PLTSEFLNIFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMGLM 230

Query: 386 NRLNAKIAL 394
             +  +  L
Sbjct: 231 RWIEGRTRL 239



 Score = 43.5 bits (101), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   ++ GF  T  ++    + A I+G+L G  R   NK +A I  VYV +FRNIP
Sbjct: 18  EPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIGTVYVSIFRNIP 77

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  V  +LP
Sbjct: 78  LIVQFFIWYLVVPELLP 94


>gi|322833891|ref|YP_004213918.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169092|gb|ADW74791.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 225

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A + + AA+ +EI+R+G+I++ RGQ  AA+ALG+T  ++ +LV+LPQA R+++
Sbjct: 96  RLISAMVAFALFEAAYYSEIIRAGIISIARGQSSAALALGMTQWQSMKLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +G AD       I ++ G  +E++L    IY  +S+  +L 
Sbjct: 156 PLLLTQAIVLFQDTSLVYVLGLADFFRSASNIGDRDGTLVEMVLFAGLIYFVISLCASLL 215

Query: 385 MNRLNAK 391
           +  L  +
Sbjct: 216 VRYLKKR 222


>gi|296162980|ref|ZP_06845757.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295886774|gb|EFG66615.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 225

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 77/126 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RL++LPQA R+++P L
Sbjct: 99  SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLIVLPQAFRAMVPLL 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   +  AD       I ++ G  +E++L     Y  + ++ +  +  
Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVIASSLVKG 218

Query: 388 LNAKIA 393
           L  K+A
Sbjct: 219 LQKKVA 224


>gi|120403817|ref|YP_953646.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956635|gb|ABM13640.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 308

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 101/180 (56%), Gaps = 23/180 (12%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALK 241
           ++ ++S ++GIVL +F T  RLS +         P+L    ++  ++  G P  V +A  
Sbjct: 73  QLTIYSMIIGIVLGVFLTVMRLSDN---------PVLSSVAWVFLWIFRGTPIYVQLAFW 123

Query: 242 ------YQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                 YQ +    P    F  +    +S  F+   I L    AA++AEIVR+G+++VP 
Sbjct: 124 GLFPTIYQNIQLGVPFGPSFFHLDLQDLSIPFVLAVIGLGLNEAAYMAEIVRAGIMSVPE 183

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVG 353
           GQMEA+ ALG++  KA R  +LPQAMR IIPP  ++ ++LLK +SL  AV +A D+ S+ 
Sbjct: 184 GQMEASTALGMSWGKAMRRTVLPQAMRVIIPPTGNELISLLKTTSLVTAVPYAFDVYSIA 243


>gi|296449544|ref|ZP_06891321.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296878133|ref|ZP_06902148.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296261608|gb|EFH08426.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296430886|gb|EFH16718.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 230

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 107/185 (57%), Gaps = 8/185 (4%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLY 270
             K  +A+  +YI   ++ G P LV I   Y + F  P LG +F  + G  +  EF++  
Sbjct: 52  KSKVLRAISSIYIE--VLRGTPLLVQI---YIVWFGLPQLGIRFPMLFG--IPSEFIASA 104

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
            ALS  + A++AEI+RSG+ +V  GQMEA+ +LGL +    R +++PQA+++I+P L ++
Sbjct: 105 FALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPSLANE 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K SS+   +G  +++     + N   +A+E +++   IY  ++  ++  +  L  
Sbjct: 165 FITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVGLLEK 224

Query: 391 KIALK 395
           K+++ 
Sbjct: 225 KLSVS 229


>gi|167586131|ref|ZP_02378519.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia ubonensis Bu]
          Length = 225

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 69/108 (63%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ +  A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYATAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       I ++ G ++E+IL
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199



 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +  V  VL
Sbjct: 38  GTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFFLIVPQVL 83


>gi|327190179|gb|EGE57284.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 271

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 81/127 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R I PPL++ 
Sbjct: 145 IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 204

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++L + R+  
Sbjct: 205 FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRIER 264

Query: 391 KIALKEK 397
           K+  K +
Sbjct: 265 KMKQKPR 271


>gi|322392259|ref|ZP_08065720.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus peroris ATCC 700780]
 gi|321144794|gb|EFX40194.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus peroris ATCC 700780]
          Length = 227

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 115/209 (55%), Gaps = 19/209 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG++L+ FA R          K  PL++ S   I+   G P +V I + Y L H   P+
Sbjct: 33  ILGVLLA-FAQR---------SKIKPLVWFSNLYIWIFRGTPMMVQIMIAYALMHISAPI 82

Query: 251 LGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +     IG   V     +   I +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  + 
Sbjct: 83  IQ----IGILDVDLTRLIPGIIIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKN 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L 
Sbjct: 139 AMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLF 198

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             F YL ++ ++ + +     ++   +KK
Sbjct: 199 AAFYYLIMTSILTVALKAFENRMGQGDKK 227


>gi|318076288|ref|ZP_07983620.1| arginine/ornithine transport permease [Streptomyces sp. SA3_actF]
          Length = 286

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 20/239 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+        F ++R LS    TM       V     G+VL++   RLS++       
Sbjct: 34  VPDY--------FFDDRILSGLGKTMLLTVVAMVIGIAGGVVLAVM--RLSKN---PVTS 80

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++   YI  F   G P LV + + + L   F+   LG       S+     ++  + L  
Sbjct: 81  SIAWFYIWFFR--GTPVLVQLMVWFNLGLVFEYINLGPLYKDYWSSFMTPLLTALLGLGL 138

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA++AEI R+GL+AV  GQ EAA ALG++H K  R +++PQAMR I+PP  ++ +N+L
Sbjct: 139 NEAAYMAEICRAGLLAVDEGQTEAAHALGMSHAKTLRRIVIPQAMRVIVPPTGNEVINML 198

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           K +SL  AV + +L+     I   +G  +E++ +   W  I  S+  +   ++ R  A+
Sbjct: 199 KTTSLVAAVQYPELLRAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIERYYAR 257


>gi|229028441|ref|ZP_04184563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
 gi|228732890|gb|EEL83750.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
          Length = 214

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP    + LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPE---VGLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                               ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQIISGQ 181



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|256830361|ref|YP_003159089.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256579537|gb|ACU90673.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 271

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 78/124 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +AL+ +  A+ +EI+R+G++A+PRGQ E A++LG++       V+LPQA+R+I+PPL
Sbjct: 136 SAVLALALFEGAYASEIIRAGILAIPRGQWEGALSLGMSRASVYMQVILPQALRNILPPL 195

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           TSQ ++L+K+S+L   +   DL   G  II +T  + EI  +   IYL  ++ ++     
Sbjct: 196 TSQAVSLIKDSALVSTIAIYDLTMHGQAIIAETFLSFEIWSVVAAIYLVFTVTLSSLARL 255

Query: 388 LNAK 391
           L  +
Sbjct: 256 LEKR 259


>gi|300868857|ref|ZP_07113463.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC
           6506]
 gi|300333074|emb|CBN58655.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC
           6506]
          Length = 217

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 12/193 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    K  K L L+Y+  F   G P L+ + L +   F   V+   N      +
Sbjct: 36  FLVMLMRISPNKIIKYLSLIYVEFFQ--GTPLLMQLFLTF---FGLSVIFNLN------L 84

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP +++  IAL+ YT+AF+AEI R  + A+P+GQ EA+ ALGL + K  + ++LPQA++ 
Sbjct: 85  SP-WIAAAIALTTYTSAFLAEIWRGSVAAIPKGQWEASTALGLNYFKQLQRIILPQAIKM 143

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            IPP     + ++K +SLA  +GF +L      I N T +   +  I   IY  L   ++
Sbjct: 144 SIPPTVGFAVQVIKGTSLASVIGFVELTRSATAISNVTFKPFLVFTIAAVIYFCLCFPLS 203

Query: 383 LFMNRLNAKIALK 395
           L+   L  K A K
Sbjct: 204 LWSKHLEQKFAYK 216


>gi|296390282|ref|ZP_06879757.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
          Length = 248

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ + L  +TAA + E VR+G+ A+P GQ  AA A+G    +  R VLLPQA R IIP
Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RLVERKVAV 239



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    + G   T  +A  G I A  +G+L+G  R   N+LV+ +   YVE+FRN+P
Sbjct: 17  GSETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGLATAYVEIFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y  V  +LP
Sbjct: 77  LLVQLFIWYFLVPDLLP 93


>gi|317053312|ref|YP_004119079.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953051|gb|ADU72523.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 247

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 76/135 (56%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  + +AF+ E + +GL AVP GQ EAA++ G T   A R +LLPQ + 
Sbjct: 110 LTPEFLCSAWGLGIFISAFLVEELSAGLYAVPDGQREAALSQGFTTAAALRWILLPQGLA 169

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      + +    A+E   +   +YL+  +++
Sbjct: 170 NAWQPVAGQYLNLMKLSSLASGIGFAELTYQVRQVDSYNAHALEAFAVGTVLYLATGLLL 229

Query: 382 ALFMNRLNAKIALKE 396
            L  + L     +K+
Sbjct: 230 GLIFSWLGPGQRIKD 244


>gi|169342343|ref|ZP_02863411.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens C str. JGS1495]
 gi|169299568|gb|EDS81631.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens C str. JGS1495]
          Length = 223

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 78/109 (71%), Gaps = 1/109 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  IA+S  +AA+++EI+R+G+ AV +GQ+EAA +LG+T R A RL++LPQA+++I+P +
Sbjct: 96  SCIIAISLNSAAYVSEIIRAGIDAVDKGQLEAARSLGMTERMAMRLIILPQAIKNILPAI 155

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-IILIWMFIYL 375
            ++++ ++K SS+A  +G A+L+     +   T +  E +I+I MF ++
Sbjct: 156 GNEFVAIIKESSMASTIGVAELMYSSKIVTGATYKGFEPLIVIAMFYFV 204


>gi|124265637|ref|YP_001019641.1| putative ABC transporter protein glutamate/aspartate transmembrane
           subunit [Methylibium petroleiphilum PM1]
 gi|124258412|gb|ABM93406.1| putative ABC transporter protein, putative glutamate/aspartate
           transmembrane subunit [Methylibium petroleiphilum PM1]
          Length = 246

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 69/105 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ +  AL  +T+A IAE V++G+ ++PRGQ  A +A+GLT  +  R VLLP A R +
Sbjct: 109 PSFVLVVFALGFFTSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVLLPMAFRIV 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           IPPLTS+ +N++KNSS+A AV  A+L         +T + +E+ L
Sbjct: 169 IPPLTSESMNIIKNSSVAFAVSIAELTMFAMQAQEETSRGVEVYL 213


>gi|218659439|ref|ZP_03515369.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli IE4771]
          Length = 129

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 79/122 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R I PPL++ 
Sbjct: 3   IALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLSND 62

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++L + R+  
Sbjct: 63  FVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRIEK 122

Query: 391 KI 392
           K+
Sbjct: 123 KM 124


>gi|170720285|ref|YP_001747973.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169758288|gb|ACA71604.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 248

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 77/128 (60%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S+ I L  +TAA + E VR+G+ A+PRGQ  AA A+G +  +    VLLPQA R IIPP
Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPRGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPP 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M 
Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231

Query: 387 RLNAKIAL 394
            +  K+A+
Sbjct: 232 LVEKKVAV 239



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           G+L+G  R   N+LV+ I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 47  GSLLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLP 93


>gi|255656164|ref|ZP_05401573.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
 gi|296450402|ref|ZP_06892158.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296879475|ref|ZP_06903469.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296260663|gb|EFH07502.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296429621|gb|EFH15474.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 222

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 112/199 (56%), Gaps = 15/199 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG++L+ F    S+     T      +Y+S F   G P L+ I   +  +F  P++  F
Sbjct: 36  LLGVILAFFTQTKSKILQYITR-----VYVSFFR--GTPLLIQI---FFFYFGFPMV--F 83

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +F+     SP ++++ I L   ++A++AEI+R+ + +V +GQ EA  A GL+  ++   +
Sbjct: 84  SFM--KDCSP-YLAIVICLGVNSSAYMAEIIRASIESVDKGQQEACYAFGLSKYQSMVKI 140

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA  S +PP+ S  L+++K SSL + +G  DL+ V       + +  EI ++ + IY
Sbjct: 141 ILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMVTILIY 200

Query: 375 LSLSIMIALFMNRLNAKIA 393
            ++SIM++   +++  +I 
Sbjct: 201 WAVSIMLSNIQSKVEKRIG 219


>gi|183598118|ref|ZP_02959611.1| hypothetical protein PROSTU_01483 [Providencia stuartii ATCC 25827]
 gi|188020277|gb|EDU58317.1| hypothetical protein PROSTU_01483 [Providencia stuartii ATCC 25827]
          Length = 246

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 66/100 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+P
Sbjct: 111 FISSTLCLGLFTAARMTEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVILP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           P+TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E
Sbjct: 171 PMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWE 210



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   +L G   T  L+    I A ++G+  G  R   N+ +A I  VYVE+FRN+P
Sbjct: 17  GNTTYLGWLLSGLEVTVALSICAWIIAFLVGSFFGILRTVPNRFLAMIGTVYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|134294749|ref|YP_001118484.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134137906|gb|ABO53649.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Burkholderia vietnamiensis
           G4]
          Length = 225

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 77/132 (58%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+++P L +Q + L +++SL   +  AD       + ++ G  +E++L     Y  +  +
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSL 211

Query: 381 IALFMNRLNAKI 392
            +  +  L  K+
Sbjct: 212 ASALVKGLQKKV 223



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +
Sbjct: 19  GAIVTFKITLIAIVIGIVWGTLLALMRLSGVKPLAWFAKGYVTVFRSIPLVMVLLWFF 76


>gi|118476328|ref|YP_893479.1| glutamine ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|196035649|ref|ZP_03103052.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|218901838|ref|YP_002449672.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|228913331|ref|ZP_04076964.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228925830|ref|ZP_04088914.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228932069|ref|ZP_04094961.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228944394|ref|ZP_04106767.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|118415553|gb|ABK83972.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Bacillus thuringiensis str. Al Hakam]
 gi|195991616|gb|EDX55581.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|218539284|gb|ACK91682.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|228815296|gb|EEM61544.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228827652|gb|EEM73394.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228833845|gb|EEM79398.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228846240|gb|EEM91259.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 214

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP      LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                               ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQIISGQ 181



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|30260796|ref|NP_843173.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47525921|ref|YP_017270.1| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183634|ref|YP_026886.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|49480225|ref|YP_034900.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|65318068|ref|ZP_00391027.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
 gi|165872943|ref|ZP_02217566.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167635139|ref|ZP_02393455.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|167640927|ref|ZP_02399185.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|170689042|ref|ZP_02880242.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|170708502|ref|ZP_02898944.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|177652796|ref|ZP_02935169.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190568586|ref|ZP_03021492.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196041862|ref|ZP_03109151.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|227816488|ref|YP_002816497.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|229599982|ref|YP_002865240.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|254684281|ref|ZP_05148141.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CNEVA-9066]
 gi|254722085|ref|ZP_05183874.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A1055]
 gi|254738745|ref|ZP_05196448.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Western North America USA6153]
 gi|254742043|ref|ZP_05199730.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Kruger B]
 gi|254754971|ref|ZP_05207005.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Vollum]
 gi|254762298|ref|ZP_05214142.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Australia 94]
 gi|30254245|gb|AAP24659.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47501069|gb|AAT29745.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177561|gb|AAT52937.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|49331781|gb|AAT62427.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|164711297|gb|EDR16851.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167511147|gb|EDR86535.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|167529398|gb|EDR92149.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|170126623|gb|EDS95508.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|170667027|gb|EDT17790.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|172081830|gb|EDT66899.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190560380|gb|EDV14359.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196027356|gb|EDX65974.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|227005796|gb|ACP15539.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|229264390|gb|ACQ46027.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
          Length = 214

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP      LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                               ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQIISGQ 181



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|15596538|ref|NP_250032.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|107100792|ref|ZP_01364710.1| hypothetical protein PaerPA_01001820 [Pseudomonas aeruginosa PACS2]
 gi|116049293|ref|YP_791904.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218892554|ref|YP_002441423.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254234460|ref|ZP_04927783.1| hypothetical protein PACG_00312 [Pseudomonas aeruginosa C3719]
 gi|254239712|ref|ZP_04933034.1| hypothetical protein PA2G_00336 [Pseudomonas aeruginosa 2192]
 gi|313106332|ref|ZP_07792575.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
 gi|9947281|gb|AAG04730.1|AE004563_7 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|115584514|gb|ABJ10529.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166391|gb|EAZ51902.1| hypothetical protein PACG_00312 [Pseudomonas aeruginosa C3719]
 gi|126193090|gb|EAZ57153.1| hypothetical protein PA2G_00336 [Pseudomonas aeruginosa 2192]
 gi|218772782|emb|CAW28567.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310879077|gb|EFQ37671.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
          Length = 248

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ + L  +TAA + E VR+G+ A+P GQ  AA A+G    +  R VLLPQA R IIP
Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RLVERKVAV 239



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    + G   T  +A  G I A  +G+L+G  R   N+LV+ I   YVE+FRN+P
Sbjct: 17  GSETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATAYVEIFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y  V  +LP
Sbjct: 77  LLVQLFIWYFLVPDLLP 93


>gi|289642307|ref|ZP_06474455.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           symbiont of Datisca glomerata]
 gi|289507839|gb|EFD28790.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           symbiont of Datisca glomerata]
          Length = 285

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 81/135 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P    + I L+ Y +  I+EIVR+G++AVP+GQ +AA ALGLTH +  R+VLLPQA RS+
Sbjct: 140 PPLWYIVIGLTAYNSVIISEIVRAGILAVPKGQRDAASALGLTHGQTLRIVLLPQAFRSM 199

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L SQ + +LK++SL   + + +L+      I      I+  L+   I++ ++ ++  
Sbjct: 200 LPALISQLVVILKDTSLGAFISYEELLRRALIAIQTLHNPIQTYLVIGGIFILINYLVTR 259

Query: 384 FMNRLNAKIALKEKK 398
               L A+++ +  +
Sbjct: 260 LATYLEARLSGRRAR 274


>gi|300172545|ref|YP_003771710.1| glutamine ABC transporter permease [Leuconostoc gasicomitatum LMG
           18811]
 gi|299886923|emb|CBL90891.1| glutamine ABC transporter permease component [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 213

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 77/127 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +AL  YT+AFIAE VR+G+++V  GQME A A GL+  +A + ++LPQA R  +P
Sbjct: 83  FTSGTVALMLYTSAFIAETVRAGILSVNGGQMEGARANGLSFAQAMQYIILPQAFRIALP 142

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q++NL+KNSS+   VG  DL+  G  +   T       +I    YL L++ ++ ++
Sbjct: 143 SLGNQFINLVKNSSILAFVGGLDLMYQGNMVAANTFDTFSTYIIVAIFYLILTLPLSYYI 202

Query: 386 NRLNAKI 392
             L  K+
Sbjct: 203 QHLERKL 209



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T   +   +I + I+GT     ++   K    I  VYV+VFRNIP L++ FF +
Sbjct: 12  LQGFGYTLLSSIIALIGSMILGTGFAIMQIVPQKWAQVIGNVYVQVFRNIPLLIITFFFF 71


>gi|330505355|ref|YP_004382224.1| putative permease of ABC transporter [Pseudomonas mendocina NK-01]
 gi|328919641|gb|AEB60472.1| putative permease of ABC transporter [Pseudomonas mendocina NK-01]
          Length = 221

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 17/178 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PLL + T+  F +P +    L++    D PV G F+            S  +A   +
Sbjct: 61  RSIPLLLVITWFYFAVPFI----LRWITGEDTPV-GAFS------------SCLVAFVMF 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+  EIVR+G+ A+P+GQM AA ALG+T+ ++ RL++LPQA R + P L  Q + L +
Sbjct: 104 EAAYFCEIVRAGIQAIPKGQMGAASALGMTYGQSMRLIILPQAFRKMTPLLLQQSIILFQ 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL   VG  D ++   +  +  GQ  E ++    +Y ++S   +  +  L  ++A+
Sbjct: 164 DTSLVYTVGLMDFLNAARSRGDIIGQPHEFLIFAGLVYFTVSFAASRLVKLLQKRLAV 221


>gi|320177110|gb|EFW52126.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella dysenteriae CDC 74-1112]
          Length = 158

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 73/130 (56%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIP 159
            +VL  LP P
Sbjct: 145 FAVLRNLPGP 154


>gi|222082232|ref|YP_002541597.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726911|gb|ACM30000.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 319

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 18/193 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG++L++   RLS+   ++   +L  L+I  +   G P LV +   Y L    P L
Sbjct: 86  FGIVLGLLLAV--ARLSK---DRLANSLASLFI--WFFRGTPLLVQLIFWYNLSTLFPTL 138

Query: 252 GQ--------FNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      ++   S +SP  M+  IA L+   AA++AEI+R GL++V +GQ E A A
Sbjct: 139 SIGIPFGPTFMSWDTNSVISP--MTAAIAGLALNEAAYMAEIIRGGLLSVDKGQFETAEA 196

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G+T  +A   +++PQAMRSI+PP  +Q ++++K +SL   +  ADL+    +I N+T +
Sbjct: 197 FGMTRARALSRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQSIYNRTFE 256

Query: 363 AIEIILIWMFIYL 375
            + ++L+ +  YL
Sbjct: 257 VVPMLLVAVIWYL 269


>gi|187919126|ref|YP_001888157.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717564|gb|ACD18787.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 222

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 77/115 (66%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +
Sbjct: 87  PAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIDDLMHEGQKIISVSYRSLEVYLAIALVYLVLT 201


>gi|107021748|ref|YP_620075.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|170731991|ref|YP_001763938.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|105891937|gb|ABF75102.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Burkholderia cenocepacia
           AU 1054]
 gi|169815233|gb|ACA89816.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 225

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 77/132 (58%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+++P L +Q + L +++SL   +  AD       + ++ G  +E++L     Y  +  +
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSL 211

Query: 381 IALFMNRLNAKI 392
            +  +  L  K+
Sbjct: 212 ASALVKGLQKKV 223



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +
Sbjct: 19  GAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFF 76


>gi|317491047|ref|ZP_07949483.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920594|gb|EFV41917.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 254

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++  GQMEA+ ALG++  K  R V+LPQA R I+P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDHGQMEASRALGMSWGKTMRKVILPQAFRRILP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    IY  L+ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +++  + +
Sbjct: 242 QHMEKRLSKSDSR 254


>gi|311106036|ref|YP_003978889.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 6 [Achromobacter
           xylosoxidans A8]
 gi|310760725|gb|ADP16174.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 6
           [Achromobacter xylosoxidans A8]
          Length = 222

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 81/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L  Y+ A+++EIVR  + +V RGQ EAA +LG++  +A R+++LPQA+  +
Sbjct: 87  PAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIVLPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E  L+   IYL L+    L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVVALIYLILTTATML 206

Query: 384 FMNRLNAKI 392
            + ++  ++
Sbjct: 207 VLRKVEHRL 215



 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 17/151 (11%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIF 146
           A++ G V T  +    ++ A +IG LVG GRL+  + V + +C VY+ +FR  P LV +F
Sbjct: 14  ALINGAVVTVEVTAGALLLACVIGLLVGVGRLNPKRYVIYNLCSVYLLLFRGTPLLVQLF 73

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FA 204
             +        +P   I LP          +   L +   +  +V   V G + S+    
Sbjct: 74  IWF------FGLPHFGITLP--------AFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQ 119

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           T  +R     +G+A+ ++ +   ++  +P L
Sbjct: 120 TEAARSLGMSSGQAMRIIVLPQAVVRMIPPL 150


>gi|227820423|ref|YP_002824394.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339422|gb|ACP23641.1| probable amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 323

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 75/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI R+G+ ++PRGQ E A ALGL+  +   LV+LPQAMR IIPP  +Q
Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPRGQTEGATALGLSPAQTMGLVILPQAMRVIIPPTGNQ 255

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL   VG  +L+ +  T      + IE+++    IY  LS+ +    +R+ A
Sbjct: 256 FIAMLKDSSLVSVVGVWELMYLARTQGQTEFRHIEMLITASMIYWLLSVCLEFLQSRIEA 315

Query: 391 K 391
           +
Sbjct: 316 R 316


>gi|311103231|ref|YP_003976084.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 1 [Achromobacter
           xylosoxidans A8]
 gi|310757920|gb|ADP13369.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 1
           [Achromobacter xylosoxidans A8]
          Length = 239

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  +   AL  +TAA +A  VRSG+ A+ RGQ  AA A G+T  +A R +LLPQA+R +
Sbjct: 101 PEIWTAIAALGLFTAARVAVQVRSGIAALSRGQRLAAYASGMTLAQAYRYILLPQALRLV 160

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP+TS++L + KNS+LA+ +G  ++ +    I + T    E       +YLS+++ +  
Sbjct: 161 LPPMTSEFLTVFKNSALALTIGVFEMTAQSRQIESYTFSGFEAFTAATLVYLSIALCVTA 220

Query: 384 FMNRLNAKI 392
            M  L  K+
Sbjct: 221 GMRSLEKKL 229



 Score = 37.0 bits (84), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA-GRLSANKLVAWICRVYVEVFRNIP 140
           +  YA  ++ G   T  ++ +    A +IG  +G  G L     + W+  VYV VFRN+P
Sbjct: 13  EEPYAGWLISGLQATVLISLAAWAIAVVIGLALGVLGSLPGR--IRWLLTVYVSVFRNVP 70

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  +  V  +LP
Sbjct: 71  LLVQLFIWFFVVPELLP 87


>gi|261823781|ref|YP_003261887.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607794|gb|ACX90280.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 247

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 62/85 (72%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++    L+ Y++AFIAE +RSG+  V  GQ  AA ALGLT  ++ R V+LPQA++  +
Sbjct: 115 EFLAGLAGLTLYSSAFIAEEIRSGIRGVAHGQKYAAQALGLTGWQSMRYVVLPQALKIAL 174

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL  QY+N++KNSSL +A+G A+L
Sbjct: 175 PPLLGQYMNIVKNSSLTMAIGVAEL 199



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 32/194 (16%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y T +  GF+ T  L+   ++ +T+ G L+ A R S   ++  +   Y  +FRN P LV
Sbjct: 16  QYLTWLWHGFLITLGLSLGTVVLSTVSGFLLAAARDSQIHVLRGVVVAYSSLFRNTPLLV 75

Query: 144 VIFFLYKSVLSVLPIP-DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LS 201
            +FF Y     + P      +  P  + L    L++P+           F F+ G+  L+
Sbjct: 76  QLFFWYFGAGQLFPSEMMQWLNAPHAISLLGMTLAWPS-----------FEFLAGLAGLT 124

Query: 202 LFAT-----------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           L+++           R   H  +   +AL L    +     LP  + IAL        P+
Sbjct: 125 LYSSAFIAEEIRSGIRGVAHGQKYAAQALGLTGWQSMRYVVLPQALKIAL-------PPL 177

Query: 251 LGQF-NFIGGSTVS 263
           LGQ+ N +  S+++
Sbjct: 178 LGQYMNIVKNSSLT 191


>gi|209547236|ref|YP_002279154.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538480|gb|ACI58414.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 318

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 107/195 (54%), Gaps = 15/195 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + ++G VL L    ++R   +    +L  L+I  F   G P LV +   Y L    P 
Sbjct: 81  VVAMIIGTVLGLLLA-VARMSKDHLASSLASLFIWFFR--GTPLLVQLIFWYNLSTLFPT 137

Query: 251 LG-QFNFIG--------GSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           L     F G         S +SP  M+  IA L+   +A++AEI+R GL++V +GQ E A
Sbjct: 138 LSIGIPFFGPTFASWDTNSVISP--MTAAIAGLALNESAYMAEIIRGGLLSVDKGQFETA 195

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A G+T  +A R +++PQAMRSI+PP  +Q ++++K +SL   +  ADL+    +I N+T
Sbjct: 196 EAFGMTRARALRRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQSIYNRT 255

Query: 361 GQAIEIILIWMFIYL 375
            + I ++L+ +  YL
Sbjct: 256 FEVIPMLLVAVTWYL 270


>gi|238791255|ref|ZP_04634894.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia intermedia ATCC 29909]
 gi|238729388|gb|EEQ20903.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia intermedia ATCC 29909]
          Length = 255

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++P
Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMEKRFGKSDSR 254


>gi|116750585|ref|YP_847272.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699649|gb|ABK18837.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 240

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 101/189 (53%), Gaps = 13/189 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A RL    + +T + +PLL    F  F +P+L+    +  L+ +   +   +++ G    
Sbjct: 55  AARLVGGAYVETLRNIPLLVQLFFWYFAVPSLLPGKTERWLYAN---VRDLSYVLG---- 107

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  +AL  YTAA +AE VRSGL+AVP GQ  AA++ GL+     R V+LP A+R +
Sbjct: 108 ------VLALGTYTAARVAEAVRSGLLAVPAGQFRAALSTGLSPAGTYRHVILPYALRVV 161

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L++++L   KNSSLA+ +G  +   +   I + T   +E       +YL  S+ + +
Sbjct: 162 IPLLSTEFLTCFKNSSLAMTIGVMETTGMANYIDSFTFHGLETTTAASLVYLLTSLSVIV 221

Query: 384 FMNRLNAKI 392
            M R+ +K+
Sbjct: 222 LMGRIESKM 230


>gi|163789533|ref|ZP_02183971.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7]
 gi|159875065|gb|EDP69131.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7]
          Length = 483

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 113/204 (55%), Gaps = 17/204 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+ + +LG++  LF+   ++  +          +I+T  +  L  + LI L + ++F  P
Sbjct: 295 FIIATILGVIFGLFSASPNKVLN----------WIATIYVDILRGIPLIVLAFFIYFSIP 344

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              QF  I      P +++  I LS  T A+IAE+VR G+ AV  GQ+EA+ +LGLT+  
Sbjct: 345 ---QFLNI----QIPAYLAGVITLSLNTTAYIAELVRGGIQAVDNGQLEASRSLGLTYNT 397

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + R V+LPQA++ +IP   +Q++  LK++S+   +G  +L   G  II +T  + ++ LI
Sbjct: 398 SMRKVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSGDMWLI 457

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              +Y+ +  ++  F N L  +++
Sbjct: 458 VGLMYIIIITILTKFSNYLERRLS 481



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 40/70 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L  +  I ATI+G + G    S NK++ WI  +YV++ R IP +V+ FF+
Sbjct: 280 LLKGLGRTLLLTITAFIIATILGVIFGLFSASPNKVLNWIATIYVDILRGIPLIVLAFFI 339

Query: 149 YKSVLSVLPI 158
           Y S+   L I
Sbjct: 340 YFSIPQFLNI 349


>gi|213647380|ref|ZP_03377433.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
          Length = 151

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 23  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 82

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 83  PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 142

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 143 VSYLKKR 149


>gi|157369068|ref|YP_001477057.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320832|gb|ABV39929.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 254

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 78/133 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+ + K  R V+LPQA R ++P
Sbjct: 121 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMGYGKTMRKVILPQAFRRMLP 180

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  L+ +++L +
Sbjct: 181 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLSLMV 240

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 241 QHMEKRFGKSDSR 253


>gi|116688694|ref|YP_834317.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|116646783|gb|ABK07424.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Burkholderia cenocepacia
           HI2424]
          Length = 226

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 69/108 (63%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA 
Sbjct: 93  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAF 152

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       + ++ G  +E++L
Sbjct: 153 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANVGDRDGTTVEMVL 200



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +
Sbjct: 20  GAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWFF 77


>gi|302558467|ref|ZP_07310809.1| arginine/ornithine transporter [Streptomyces griseoflavus Tu4000]
 gi|302476085|gb|EFL39178.1| arginine/ornithine transporter [Streptomyces griseoflavus Tu4000]
          Length = 326

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+++EI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+PP  ++ +N+LK 
Sbjct: 181 AAYMSEICRAGLLSVDEGQTEASHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINMLKT 240

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIAL 394
           +SL  AV FADL      I   +G  +E+  +   W  I  S+  +   ++ R  A+ ++
Sbjct: 241 TSLVSAVQFADLFQEAKDIGQNSGSPVEMYFLAAAWYLIMTSILSVGQYYIERHYARGSV 300

Query: 395 KE 396
           + 
Sbjct: 301 RS 302


>gi|24379640|ref|NP_721595.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|24377593|gb|AAN58901.1|AE014958_5 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
          Length = 217

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 116/230 (50%), Gaps = 18/230 (7%)

Query: 169 MFLNN----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           MF+N     + LSF    +     I V SF+ G +L +F + L R       ++L  +YI
Sbjct: 1   MFINFHLIIKSLSFVLTGIPYTLGISVLSFLTGCLLGIFISFL-RMSQNSWLRSLARIYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  ++ G+P LV++   + L+F  P              P  +  YI  S  ++A+I+EI
Sbjct: 60  S--IMRGVPMLVVL---FVLYFGLPYF--------EVQLPALLCAYIGFSAVSSAYISEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ + AV +GQ EAA ALGL      + ++LPQA R  I PL +  L++LK+SSLA  +
Sbjct: 107 FRASISAVDKGQWEAAGALGLPMTSILKSIILPQAFRIAIAPLGNVMLDMLKSSSLAAMI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              D+      I  +    + + ++  FIY  L  +  +F N L AK+++
Sbjct: 167 TVPDIFQNAKIIGGREYDYMSMYILIAFIYWLLCFLFEMFQNHLEAKLSV 216


>gi|170288144|ref|YP_001738382.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga sp. RQ2]
 gi|281411812|ref|YP_003345891.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga naphthophila RKU-10]
 gi|170175647|gb|ACB08699.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga sp. RQ2]
 gi|281372915|gb|ADA66477.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga naphthophila RKU-10]
          Length = 216

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 30/178 (16%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PL+ +  FL+ FGLP L        L FD+                 F +  IAL  
Sbjct: 63  RGTPLM-VQLFLVYFGLPEL-------GLEFDR-----------------FTAAVIALGI 97

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A++AEIVR+G+ +VP+GQ EAA +LG++H +A   V+LPQA R I+P L ++++ L 
Sbjct: 98  NSGAYVAEIVRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALA 157

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMIALFMNRLN 389
           K+SSLA+ +G  +L+     I+++T  +  I     LI+  I  S+S ++     RL 
Sbjct: 158 KDSSLAMVIGTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLK 215



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G ++T  L    ++    IG  VG GRLS  +++ +   VYVE  R  P +V +F +
Sbjct: 15  LLKGALSTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFLRGTPLMVQLFLV 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|15643358|ref|NP_228402.1| amino acid ABC transporter, permease protein [Thermotoga maritima
           MSB8]
 gi|4981111|gb|AAD35677.1|AE001734_4 amino acid ABC transporter, permease protein [Thermotoga maritima
           MSB8]
          Length = 216

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 30/178 (16%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PL+ +  FL+ FGLP L        L FD+                 F +  IAL  
Sbjct: 63  RGTPLM-VQLFLVYFGLPEL-------GLEFDR-----------------FTAAVIALGI 97

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A++AEIVR+G+ +VP+GQ EAA +LG++H +A   V+LPQA R I+P L ++++ L 
Sbjct: 98  NSGAYVAEIVRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALA 157

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMIALFMNRLN 389
           K+SSLA+ +G  +L+     I+++T  +  I     LI+  I  S+S ++     RL 
Sbjct: 158 KDSSLAMVIGTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLK 215



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++    IG  VG GRLS  +++ +   VYVE  R  P +V +F +
Sbjct: 15  LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFLRGTPLMVQLFLV 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|322384242|ref|ZP_08057951.1| amino acid ABC transporter permease-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321150890|gb|EFX44316.1| amino acid ABC transporter permease-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 175

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 83/129 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +S   AL+  +AA++AEI R+G+ ++ +GQMEAA +LG+TH  A +L+++PQA+R+I
Sbjct: 44  PGMVSGIAALTLNSAAYVAEIFRAGIESIDKGQMEAARSLGMTHNMAMKLIIIPQAIRNI 103

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++++ ++K SS+   VG  DL+    T+   T +A E +++   +Y  ++  ++ 
Sbjct: 104 LPALGNEFIVIIKESSIVSIVGITDLMFNADTVRGVTYKAFEPLIVAAVVYFIMTFTLSK 163

Query: 384 FMNRLNAKI 392
            + +   +I
Sbjct: 164 LLGKFERRI 172


>gi|255067574|ref|ZP_05319429.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria sicca ATCC 29256]
 gi|255048195|gb|EET43659.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria sicca ATCC 29256]
          Length = 248

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ RGQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDRGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQSTISGRYSVYEEPLYTVALIYLLMTTFLGWVFLRLEN 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|49082214|gb|AAT50507.1| PA1341 [synthetic construct]
          Length = 249

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ + L  +TAA + E VR+G+ A+P GQ  AA A+G    +  R VLLPQA R IIP
Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RLVERKVAV 239



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    + G   T  +A  G I A  +G+L+G  R   N+LV+ I   YVE+FRN+P
Sbjct: 17  GSETYLDWCIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATAYVEIFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y  V  +LP
Sbjct: 77  LLVQLFIWYFLVPDLLP 93


>gi|50121892|ref|YP_051059.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49612418|emb|CAG75868.1| ABC transporter permease protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 225

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 105/191 (54%), Gaps = 12/191 (6%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS-------TVSPEFM 267
            G  L  + +S  L+  LP ++LI      + + P +  F +I  +       T SP F 
Sbjct: 38  AGMVLAAMKMSPRLLLRLPAVMLIGF----YRNTPAIVHFFWIYYALPVITPLTFSP-FT 92

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  IALS  + AF AE+ R  + ++  GQ E A ALG+    A R V+LPQA+R +IPP 
Sbjct: 93  AAVIALSAQSGAFYAEVYRGAISSIHPGQWEGAKALGMPQSTALRRVILPQALRRMIPPF 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +   L+K++SLA ++ +++L+     + +QT + +E+  +   +Y +L ++I+LF   
Sbjct: 153 IERSFELIKSTSLASSLAYSELLYQAMQLNSQTYRPLEVYSLVAVMYFTLLLLISLFSQH 212

Query: 388 LNAKIALKEKK 398
           +  +++L +++
Sbjct: 213 IEKRLSLADRR 223


>gi|260597070|ref|YP_003209641.1| glutamate/aspartate transport system permease GltK [Cronobacter
           turicensis z3032]
 gi|260216247|emb|CBA29163.1| Glutamate/aspartate transport system permease protein gltK
           [Cronobacter turicensis z3032]
          Length = 225

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           +SP+     +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LP
Sbjct: 90  ISPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILP 149

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R+++P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +
Sbjct: 150 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVI 209

Query: 378 SIMIALFMNRLNAK 391
           S+  +L ++ L  +
Sbjct: 210 SLSASLLVSWLKKR 223



 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 17/112 (15%)

Query: 70  FEIDQG-IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           +E D G IVP          +L G V T  +  + +I   + GTL+   RLSA K  AW 
Sbjct: 3   YEFDWGSIVPSMP------YLLAGLVITLKITVTAVIFGIVWGTLLAVMRLSAFKPFAWF 56

Query: 129 CRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD---HSIVLPFGMF 170
              YV VFR+IP ++V+ + Y       + VL + P  D    S ++ F MF
Sbjct: 57  ATAYVNVFRSIPLVMVLLWFYLIVPGILQDVLGISPKTDIRLISAMVAFSMF 108


>gi|170742664|ref|YP_001771319.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196938|gb|ACA18885.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 240

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +TA+ +AE VR+G+ A+PRGQ  A  ALGLT  +  R VLLP A R I+P
Sbjct: 108 FYTAVVCLGFFTASRVAEQVRAGIQALPRGQRMAGTALGLTTSQTYRYVLLPNAYRIILP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN LKN+S+A+ +G  +L +   ++   + Q  E       +Y+ +++++    
Sbjct: 168 PLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIINLLVVTAA 227

Query: 386 NRLNAKIALKEKK 398
             L  K+A+   +
Sbjct: 228 GYLERKVAIPGAR 240



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 12/104 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +YA  +L G + T   A    + A  +G+++G  R   N+        YVE+FRNIP L
Sbjct: 19  GTYADMLLSGLLWTIVTALCAWVIAFAVGSVIGVMRTLPNRFAQAFGNGYVELFRNIPLL 78

Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174
           V +F  +  +  +LP         +PD   ++ V+  G F  +R
Sbjct: 79  VQMFLWFFVLPEMLPQSWGTWLKQLPDAPFYTAVVCLGFFTASR 122


>gi|293395619|ref|ZP_06639902.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291421938|gb|EFE95184.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 220

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 114/218 (52%), Gaps = 18/218 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +        VLG VL+L   RLSR +        PL ++S   +       LIA 
Sbjct: 21  LTLQLSLGGMALGLVLGFVLALM--RLSRFW--------PLSWLSRIYVSLFRGTPLIAQ 70

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + +++  P   QF    G  + P F +  I LS  TAA+ +E +R+ + ++ +GQ EAA
Sbjct: 71  LFMIYYGLP---QF----GIELDP-FPAALIGLSLNTAAYTSETLRAAIASIDKGQWEAA 122

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G+T  +  R V+LPQA R+ +PPL + ++ L+K++SLA  +   +L      I ++T
Sbjct: 123 ASIGMTPWQTLRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITSRT 182

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   + L    IY  ++ +++   NRL A +  ++K+
Sbjct: 183 LEVFTMYLAASLIYWVMATLLSALQNRLEAHVNRQDKE 220



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G ++   RLS    ++W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGAILTLQLSLGGMALGLVLGFVLALMRLSRFWPLSWLSRIYVSLFRGTPLIAQLFMI 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|282856550|ref|ZP_06265824.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
 gi|282585616|gb|EFB90910.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
          Length = 521

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 102/200 (51%), Gaps = 33/200 (16%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K+ V +  L IVL L    ++R F  K    L   YI   ++ G P L+      QL F 
Sbjct: 306 KVSVCAMSLAIVLGLLLA-IARLFAPKILSRLATAYIE--IVRGTPVLI------QLFF- 355

Query: 248 KPVLGQFNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   F G    G  +SP FM+  I L    AA+ AE  R+GL+AVPR QME A+AL
Sbjct: 356 -------IFYGLPNIGIKLSP-FMAGVIGLGMNYAAYEAENYRAGLMAVPRAQMEGALAL 407

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+  ++A R V++PQA+R  +PP+T+ +++LLK+SSL   +   DL    G + N     
Sbjct: 408 GMDKKQALRYVVIPQAVRVSLPPVTNDFISLLKDSSLVSMITLIDLTKAYGQLANT---- 463

Query: 364 IEIILIWMFIYLSLSIMIAL 383
                   + Y  + IM+A+
Sbjct: 464 -------YYDYFGIGIMVAV 476


>gi|288936956|ref|YP_003441015.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288891665|gb|ADC59983.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 253

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 11/173 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +L+ G+P ++++   Y   F  P+L   N  G       F ++   L  Y +A+IAEIVR
Sbjct: 69  YLLRGIPLMMVVFWTY---FCVPLLIGHNISG-------FSTMLCTLVIYESAYIAEIVR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ A+P GQ EA+ ALG+ H +A RLV+LPQA+ + +P L SQ ++++K+S+L   +  
Sbjct: 119 GGIQALPSGQYEASRALGMGHVRALRLVILPQALYNALPSLVSQLVSIIKDSTLGYVINV 178

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L      + NQ   +  ++  I    Y  ++  +    NRL  +IA + ++
Sbjct: 179 PELTYAANQVSNQLLTKPFQVFAIVALSYYIINFSLTWLANRLELRIASRRQR 231


>gi|78065233|ref|YP_368002.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77965978|gb|ABB07358.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia sp. 383]
          Length = 225

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 76/132 (57%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ  AA ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQANAAFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+++P L +Q + L +++SL   +  AD       I ++ G  +E++L     Y  +  +
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSL 211

Query: 381 IALFMNRLNAKI 392
            +  +  L  K+
Sbjct: 212 ASALVKGLQKKV 223



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + +
Sbjct: 19  GAVVTFQITLIAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWFF 76


>gi|251782901|ref|YP_002997204.1| arginine transport system permease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242391531|dbj|BAH81990.1| arginine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|322412233|gb|EFY03141.1| Putative amino acid ABC transporter [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 228

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 122/220 (55%), Gaps = 22/220 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVL 237
           +T+  +A +  F  ++G++++L           K  +  PL ++    ++   G P +V 
Sbjct: 19  VTIMISASVVFFGTIIGVLVTLI----------KRTQIKPLTWLVNTYVWIFRGTPMVVQ 68

Query: 238 IALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVP 293
           I + +  +HF+     Q   IG   ++ +F  L    I +S  + A+I+EIVR+G+ AVP
Sbjct: 69  IMIAFAWMHFN-----QMPTIGFGVLNLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVP 123

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ+EAA +LG+  R A R V+LPQA ++I+P L ++++ ++K+S+L   +G  +L +  
Sbjct: 124 KGQLEAAYSLGIRPRNAMRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGA 183

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++   T   I  +L+  F YL ++ +++  +  L  ++A
Sbjct: 184 QSVATATYSPIAPLLVAAFYYLMVTTVLSQLLAVLERRMA 223


>gi|116255125|ref|YP_770959.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259773|emb|CAK02865.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 313

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 89/158 (56%), Gaps = 8/158 (5%)

Query: 231 GLPTLVLIALKYQLH-------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           G P LV + + Y L           P +G    +  + +    +S  +ALS + A ++AE
Sbjct: 116 GTPALVQLIIWYNLSIVVKDITLWLPGVGTVYSVSTNDIMTPLVSAIVALSLHEAGYMAE 175

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSGL +V +GQ EA+  LG+    A R ++LPQAMR IIPP  ++ +NLLK +SL   
Sbjct: 176 IVRSGLKSVNKGQYEASACLGMNPSLALRRIVLPQAMRIIIPPTGNETINLLKTTSLVSI 235

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLS-LSIM 380
           +   DL+    +I  +T + I ++L+  F YL+ +SIM
Sbjct: 236 IAVGDLLYSAQSIYARTFETIPLLLVVSFWYLAVVSIM 273


>gi|150398046|ref|YP_001328513.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150029561|gb|ABR61678.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 323

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 19/277 (6%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GRL +  ++A I  +  +  R +P    I  ++  +  +L I  +S  L F  F+  +  
Sbjct: 57  GRLVSAVMIAVIAALNWKALRQLPRHWQITGVWLELFVLLMIFFYSFNLSFA-FIAKKIS 115

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +  + T   I V S  +  V++L     +LSR+     G    L    T L  GLP 
Sbjct: 116 FLISQGVVTTLYISVISIAVATVIALLGAIAKLSRN-----GVIYGLATFYTSLFRGLPL 170

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ I   Y ++   P +G       S V    ++L +   CY  A++ EI R+G+ ++PR
Sbjct: 171 LMQI---YIIYLGLPQVGYVI----SAVPAGILALSL---CY-GAYMTEIFRAGIESIPR 219

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E A ALGL+  +   LV+LPQAMR IIPP  +Q++ +LK+SSL   VG  +L+ +  
Sbjct: 220 GQSEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLKDSSLISVVGVWELMYLAR 279

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T      + IE+++    IY  LSI +    +R+ A+
Sbjct: 280 TQGQTEFRHIEMLITASMIYWILSIGLEFIQSRIEAR 316


>gi|238920804|ref|YP_002934319.1| polar amino acid ABC transporter, inner membrane subunit
           [Edwardsiella ictaluri 93-146]
 gi|238870373|gb|ACR70084.1| polar amino acid ABC transporter, inner membrane subunit
           [Edwardsiella ictaluri 93-146]
          Length = 246

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA I E VR+ + ++P GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FVSSLLCLGLFTAARICEQVRAAIQSLPAGQRSAGLAMGFTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++ ++ L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGM 230

Query: 386 NRLNAKIAL 394
           + L   + L
Sbjct: 231 HLLERHLQL 239



 Score = 39.7 bits (91), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++Y   I  G   T  L+ +  + A ++G+L+G  R   ++ +A I  +YVE+FRN+P +
Sbjct: 19  TTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGILRTLPSRPLAMIGAIYVELFRNVPLI 78

Query: 143 VVIFFLYKSVLSVLP 157
           V  F  Y  V  +LP
Sbjct: 79  VQFFTWYLVVPELLP 93


>gi|186477319|ref|YP_001858789.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193778|gb|ACC71743.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 225

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 83/140 (59%), Gaps = 1/140 (0%)

Query: 255 NFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           N +G  + +     S  +A S + AA+ +EI+R+G+ AVPRGQ+ A+ ALG+++ +A RL
Sbjct: 85  NVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNASYALGMSYPQAMRL 144

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA R+++P L +Q + L +++SL   +  AD       I ++ G  +E++L     
Sbjct: 145 VVLPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGAC 204

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           Y  + ++ +  +  L  K+A
Sbjct: 205 YFVICVVASSLVKSLQKKVA 224


>gi|28899840|ref|NP_799445.1| putative amino acid ABC transporter permease [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839888|ref|ZP_01992555.1| ABC-type glutamine transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|260361994|ref|ZP_05774999.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260876519|ref|ZP_05888874.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897424|ref|ZP_05905920.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260901309|ref|ZP_05909704.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28808092|dbj|BAC61329.1| putative amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746596|gb|EDM57584.1| ABC-type glutamine transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|308087918|gb|EFO37613.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090376|gb|EFO40071.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308109853|gb|EFO47393.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308114174|gb|EFO51714.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
          Length = 246

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 33/183 (18%)

Query: 192 FSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F+  LG++++L A  LSR          + +  +++P+L +  ++ +G+PTL+ ++L + 
Sbjct: 58  FAMTLGLLIALPA--LSRSPTLKWMNRIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH- 114

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +L
Sbjct: 115 ----------------------FWAGVIALTIAESAFMAEVFRGGIQAINRGQHEAAESL 152

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +  RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      
Sbjct: 153 GLNYWQKMRLVILPQAFRQILPPLGNQFVYVLKMSSLVSVIGLSDLTRRANELVVNEYLP 212

Query: 364 IEI 366
           +EI
Sbjct: 213 LEI 215



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 42/70 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M  A  +G L+    LS +  + W+ R+YVEV R+IP LV++ ++
Sbjct: 41  LVAGFNDTIQVSLLSMCFAMTLGLLIALPALSRSPTLKWMNRIYVEVIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 101 YYGMPTLLDV 110


>gi|309785599|ref|ZP_07680230.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella dysenteriae 1617]
 gi|308926719|gb|EFP72195.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella dysenteriae 1617]
          Length = 155

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 73/130 (56%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWY 144

Query: 150 KSVLSVLPIP 159
            +VL  LP P
Sbjct: 145 FAVLRNLPGP 154


>gi|300811394|ref|ZP_07091890.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|313123231|ref|YP_004033490.1| glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|300497629|gb|EFK32655.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|312279794|gb|ADQ60513.1| Glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|325684595|gb|EGD26754.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 222

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 117/214 (54%), Gaps = 17/214 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +    + SFV+G+ L L   R +R    KT +   ++ +   +I  LP L++I  
Sbjct: 22  VTIEVSVISIILSFVIGLALGLI--RFTR-IDAKTTRISKVVGVIIDIIRNLPLLLIIFF 78

Query: 241 KYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            Y   F  PV+G + + +  S          IA+  + +A IAE+VRSG++AV  GQME 
Sbjct: 79  SY---FGLPVMGIRVDAVQASV---------IAMVVFESAMIAEVVRSGIMAVDPGQMEG 126

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + G+T+ +A   V+LPQA+  +IP L SQ+++L+K++SLA  +   +L+     I NQ
Sbjct: 127 ARSNGMTYMQAMTHVVLPQALTKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEIIYNQ 186

Query: 360 -TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            T   I + L    +Y  +   ++ F N L+ +I
Sbjct: 187 NTNYMIPMYLAVAVMYFIICFALSSFANYLSKRI 220


>gi|323261662|gb|EGA45237.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
          Length = 219

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 91  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 150

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 151 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 210

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 211 VSYLKKR 217



 Score = 43.5 bits (101), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 19/110 (17%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E D   +PY         +L G V T  +  + ++   + GT++   RLS+   +AW  +
Sbjct: 2   EFDYPSLPY---------LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAK 52

Query: 131 VYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD---HSIVLPFGMF 170
            YV VFR+IP ++V+ + Y       ++VL + P  D    S ++ F MF
Sbjct: 53  AYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 102


>gi|323527325|ref|YP_004229478.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323384327|gb|ADX56418.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 225

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 77/126 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RL++LPQA R+++P L
Sbjct: 99  SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAFALGMGYGQAMRLIILPQAFRAMVPLL 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   +  AD       I ++ G  +E++L     Y  + ++ +  +  
Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVIASSLVKG 218

Query: 388 LNAKIA 393
           L  K+A
Sbjct: 219 LQKKVA 224


>gi|300767694|ref|ZP_07077604.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|300494679|gb|EFK29837.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 213

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 23/221 (10%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           +GL +   T+ ++    VFS ++G + ++F    SR     T + +  +YI  F    +P
Sbjct: 14  QGLGY---TLLSSVIALVFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIFR--NIP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV IA+ + +     V     F  G+          I L+ YT++FIAE VR+G+ +V 
Sbjct: 64  LLV-IAMFFYVIIPMYVAKIDGFTAGT----------IGLTIYTSSFIAETVRAGIQSVD 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSV 352
            GQME A A G+T+ +A   ++LPQA + IIPPL +Q++NL+KNSS LA   GF DL+  
Sbjct: 113 PGQMEGARANGMTYWQAMSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGF-DLMYQ 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +I + +   I   ++    YL +++ ++ +M  L  K+A
Sbjct: 172 ANSIASLSLDTINSYVVVGVFYLIITLPLSYYMRHLEKKLA 212



 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y + ++ G   T   +   ++ +TIIGT+     +  ++ +  I RVY+E+FRNIP L
Sbjct: 6   THYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLL 65

Query: 143 VVIFFLY 149
           V+  F Y
Sbjct: 66  VIAMFFY 72


>gi|156934835|ref|YP_001438751.1| hypothetical protein ESA_02683 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533089|gb|ABU77915.1| hypothetical protein ESA_02683 [Cronobacter sakazakii ATCC BAA-894]
          Length = 224

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           +SP+     +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LP
Sbjct: 89  ISPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILP 148

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R+++P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +
Sbjct: 149 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVI 208

Query: 378 SIMIALFMNRLNAK 391
           S+  +L ++ L  +
Sbjct: 209 SLSASLLVSWLKKR 222



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + +I   + GTL+   RLSA K +AW    YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVIFGIVWGTLLAVMRLSAFKPLAWFATAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       + VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGLLQDVLGISPKTDIRLISAMVAFSMF 107


>gi|70732197|ref|YP_261953.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68346496|gb|AAY94102.1| probable permease of ABC transporter PA1341 [Pseudomonas
           fluorescens Pf-5]
          Length = 248

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ + L  +TAA + E VR+G+ A+PRGQ  AA A+G +  +    VLLPQA R IIP
Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIQALPRGQESAARAMGFSLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+++
Sbjct: 231 RLVEKKVSV 239



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A ++G+++G  R   N+LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALLLGSILGVMRTVPNRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  V  +LP
Sbjct: 78  LVQLFIWYFLVPDLLP 93


>gi|240145928|ref|ZP_04744529.1| putative amino acid ABC transporter, permease/amino acid-binding
           protein [Roseburia intestinalis L1-82]
 gi|257201957|gb|EEV00242.1| putative amino acid ABC transporter, permease/amino acid-binding
           protein [Roseburia intestinalis L1-82]
          Length = 513

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 115/211 (54%), Gaps = 24/211 (11%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243
           I V + ++G+V   F   + R  H++ G      AL  LY++  ++ G P ++ + + Y 
Sbjct: 315 ITVLALLVGVVFG-FLIAIVRTNHDRNGGLTILNALCKLYLT--IVRGTPVMIQLLIIYY 371

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F     G+             +   IA    +AA++AEIVRSG++AV  GQ EA  +L
Sbjct: 372 VIFQSIDTGKI------------VVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 419

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +++    ++LPQA+++I+P L +++++LLK +S++  +G  DL   G  I + T +A
Sbjct: 420 GLNYKQTMMSIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLTKGGDIIRSVTYEA 479

Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRLNA 390
               I + LI++ + + LS ++ L   +L +
Sbjct: 480 FMPLIAVALIYLIMVMGLSKVVNLLERKLRS 510


>gi|167564082|ref|ZP_02356998.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia oklahomensis EO147]
 gi|167571224|ref|ZP_02364098.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia oklahomensis C6786]
          Length = 225

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 70/108 (64%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+     S  +A S + AA+ +EI+R+G+ AVPRGQ+ A+ ALG+ + +A RLV+LPQA 
Sbjct: 92  TIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNASFALGMNYAQAMRLVILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           R+++P L +Q + L +++SL   +  AD       I ++ G ++E+IL
Sbjct: 152 RAMVPLLLTQAIVLFQDTSLVYVISLADFFRTAANIGDRDGTSVEMIL 199


>gi|16330176|ref|NP_440904.1| glutamine ABC transporter [Synechocystis sp. PCC 6803]
 gi|1652664|dbj|BAA17584.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Synechocystis sp. PCC 6803]
          Length = 530

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 87/150 (58%), Gaps = 5/150 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV +   + ++F  P L  F  IG       F +  IALS   AA++AEI+R G+ 
Sbjct: 359 GTPMLVQL---FIIYFGLPAL--FKEIGLGITIDRFPAAIIALSLNVAAYLAEIIRGGIQ 413

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EA  +LG++  +  + V+ PQA R I+PPL ++++ L+K++SL   +GF +L 
Sbjct: 414 SIDQGQWEACESLGMSPWQTMKEVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELF 473

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
             G  I+  T +A E+ +    +YL L+ +
Sbjct: 474 REGQLIVATTYRAFEVYIAVALVYLLLTTI 503


>gi|271499665|ref|YP_003332690.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343220|gb|ACZ75985.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 281

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IALS    A++AE +RSG+++VPRGQ EAA+ALGL+    T  V+ PQA+R IIP
Sbjct: 142 FTSGIIALSLNYGAYLAETIRSGVLSVPRGQKEAAMALGLSRWVITTHVVAPQALRIIIP 201

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  SQ+++++K+SSL   +G  +L  +  +    T   +E++     IY  LSI + L  
Sbjct: 202 PAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRSTYHYMEMLTTAAVIYWLLSIGLELLQ 261

Query: 386 NRLNAK 391
            RL  +
Sbjct: 262 GRLERR 267


>gi|332041716|gb|EGI78068.1| polar amino acid abc transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 255

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 7/136 (5%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +P+ + + + L  +T++ IAE VR+G+ A+PRGQ  A +ALG +  +  R VLLP A R 
Sbjct: 113 TPKLLLVVMGLGFFTSSRIAEQVRTGIQALPRGQRYAGMALGFSTWQTYRYVLLPMAFRI 172

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PPLTS+ +N+ KNSS+A AV   +L         +T + IE+ L    +Y    ++ A
Sbjct: 173 IVPPLTSESMNIFKNSSVAFAVSITELTFFAQQAGEETSRGIEVYLAVTLLY----VISA 228

Query: 383 LFMNRLNAKIALKEKK 398
             +NR+ A I   EK+
Sbjct: 229 FAINRIMAAI---EKR 241


>gi|326333414|ref|ZP_08199660.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
 gi|325948810|gb|EGD40904.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
          Length = 267

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 22/182 (12%)

Query: 220 PLLYISTFLI---FGLPTLVL---IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           P  +IST +I    GLP LV+   + L Y L F K + G    IG  T         +AL
Sbjct: 93  PYRWISTGIIELFRGLPALVVFLVLGLGYSLAFGKQLPG--GNIGTVT---------LAL 141

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A++AE +R+G+ AVP+GQ EAA  LG+TH +A   ++LPQA R I+PPLT++ + 
Sbjct: 142 GLVGGAYMAETIRAGIQAVPKGQYEAARTLGMTHTRAMVTIVLPQAFRVILPPLTNELIL 201

Query: 334 LLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           L K+SSL   +G +    +L + G   +N       ++ I +  YL +++ +++ + R+ 
Sbjct: 202 LTKDSSLVYILGLSLDEYELTAFGREAMNANANLTPMVTIAL-CYLLITVPLSIVVRRME 260

Query: 390 AK 391
           AK
Sbjct: 261 AK 262


>gi|297190019|ref|ZP_06907417.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297150335|gb|EDY62587.2| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 276

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 25/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLIALKYQLHF 246
           FVF  VLG++++L   RLS        + L  +YI  F   GLP L   + + +   L F
Sbjct: 81  FVFGLVLGLIIALM--RLS---SVAPYRWLAGVYIEIFR--GLPALLIFIFVGVAVPLAF 133

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                     I G T    +  + + L    AA++AE +R+G+ AVP+GQMEAA +LG +
Sbjct: 134 PG------TEIPGGT----YGKVALGLGLVAAAYMAETIRAGIQAVPKGQMEAARSLGFS 183

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   V++PQA R +IPPLT++ + L K+SSL + +G      +L   G  + +QT  
Sbjct: 184 HARAMVSVIIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASQTAN 243

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   IL+    YL +++ ++  + RL A+
Sbjct: 244 STP-ILVAGLCYLLVTVPLSFVVRRLEAR 271



 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%)

Query: 95  NTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154
           NT     SG +   ++G ++   RLS+     W+  VY+E+FR +P L++  F+  +V  
Sbjct: 72  NTVVYTVSGFVFGLVLGLIIALMRLSSVAPYRWLAGVYIEIFRGLPALLIFIFVGVAVPL 131

Query: 155 VLP 157
             P
Sbjct: 132 AFP 134


>gi|254555900|ref|YP_003062317.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|254044827|gb|ACT61620.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
          Length = 213

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 112/204 (54%), Gaps = 20/204 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS ++G + ++F    SR     T + +  +YI  F    +P LV IA+ + +     V
Sbjct: 28  VFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIFR--NIPLLV-IAMFFYVIIPMYV 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F  G+          I L+ YT++FIAE VR+G+ +V  GQME A A G+T+ +A
Sbjct: 80  TKIDGFTAGT----------IGLTIYTSSFIAETVRAGIQSVDPGQMEGARANGMTYWQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
              ++LPQA + IIPPL +Q++NL+KNSS LA   GF DL+    +I + +   I   ++
Sbjct: 130 MSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGF-DLMYQANSIASLSLDTINSYVV 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL +++ ++ +M  L  K+A
Sbjct: 189 VGVFYLIITLPLSYYMRHLEKKLA 212



 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y + ++ G   T   +   ++ +TIIGT+     +  ++ +  I RVY+E+FRNIP L
Sbjct: 6   THYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLL 65

Query: 143 VVIFFLY 149
           V+  F Y
Sbjct: 66  VIAMFFY 72


>gi|320008607|gb|ADW03457.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 322

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 10/195 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGST-VS 263
           RLSR+        +  LYI  +   G P  V + L + L    PVL   F +    T V 
Sbjct: 106 RLSRN---PVTSWVAWLYI--WFFRGTPVYVQLLLWFNLALIFPVLNIPFVYKDEMTDVM 160

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             FM   + L+   AA++AEIVR+G+ +V  GQ EA+ ALG+T  K  R V+LPQA+R I
Sbjct: 161 TPFMCALLGLALNEAAYMAEIVRAGIQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVI 220

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIM 380
           IPP  ++++N+LK SSL  AV + +L+     I + +   +E++    IW  +  S+  +
Sbjct: 221 IPPTGNEFINMLKTSSLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSVFSV 280

Query: 381 IALFMNRLNAKIALK 395
              ++ R  A+  L+
Sbjct: 281 GQYYLERRYARGTLR 295


>gi|289804697|ref|ZP_06535326.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 190

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 64  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 123

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 124 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 183

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 184 VSYLKKR 190



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 10/70 (14%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD--- 160
           GT++   RLS+   +AW  + YV VFR+IP ++V+ + Y       ++VL + P  D   
Sbjct: 6   GTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRL 65

Query: 161 HSIVLPFGMF 170
            S ++ F MF
Sbjct: 66  ISAMVAFSMF 75


>gi|168231678|ref|ZP_02656736.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194470531|ref|ZP_03076515.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197247679|ref|YP_002145639.1| glutamate/aspartate ABC transporter permease GltK [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204930484|ref|ZP_03221414.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|194456895|gb|EDX45734.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197211382|gb|ACH48779.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|204320418|gb|EDZ05621.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205333960|gb|EDZ20724.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 224

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFTPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|237798756|ref|ZP_04587217.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331021609|gb|EGI01666.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 248

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RVIEKKVAV 239



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P
Sbjct: 17  GSETYLDWFISGLGWTVAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV +F  Y  V  +LP
Sbjct: 77  LLVQLFIWYFLVPDLLP 93


>gi|320535581|ref|ZP_08035678.1| ABC transporter, permease protein [Treponema phagedenis F0421]
 gi|320147544|gb|EFW39063.1| ABC transporter, permease protein [Treponema phagedenis F0421]
          Length = 270

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 24/222 (10%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           ++ S   G++L L     +R  H +  K L  +YI   L+ GLP LV+  L Y      P
Sbjct: 59  YILSIFFGLLLGL-----ARASHIRWLKELVTVYIE--LVRGLPMLVI--LYYIAFVAVP 109

Query: 250 VLGQ-FNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVRSGLIAVPRGQ 296
            +    N +    ++ E M  +            IAL    +AFIAEI R+G+ +V +GQ
Sbjct: 110 AISSVLNAVFAPLINAEIMEGFSPRSFSFALLAIIALVLGYSAFIAEIFRAGIESVDKGQ 169

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALGLT  +    ++LPQA R+I+P L ++++ ++K+SSL   +G  D+  +G   
Sbjct: 170 VEAASALGLTKTQTMIHIILPQATRNILPALANEFIAVIKDSSLVSVLGVQDITQIGKVY 229

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + T    E   +  F YL L+I +++ + RL  K  LK+ K
Sbjct: 230 SSATFLFFETYNVVAFFYLCLTISLSIAVRRLERK--LKKGK 269


>gi|318060272|ref|ZP_07978995.1| arginine/ornithine transport permease [Streptomyces sp. SA3_actG]
          Length = 347

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 3/117 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI R+GL+AV  GQ EAA ALG++H K  R +++PQAMR I+PP  ++ +N+LK 
Sbjct: 202 AAYMAEICRAGLLAVDEGQTEAAHALGMSHAKTLRRIVIPQAMRVIVPPTGNEVINMLKT 261

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           +SL  AV + +L+     I   +G  +E++ +   W  I  S+  +   ++ R  A+
Sbjct: 262 TSLVAAVQYPELLRAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIERYYAR 318


>gi|238893279|ref|YP_002918013.1| glutamate/aspartate transport system inner membrane component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238545595|dbj|BAH61946.1| glutamate/aspartate transport system inner membrane component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 250

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 75/136 (55%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + 
Sbjct: 110 LTPEFLCSMWGLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLA 169

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L   +
Sbjct: 170 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGAAM 229

Query: 382 ALFMNRLNAKIALKEK 397
            + + RL     L+  
Sbjct: 230 GVALTRLGPGRKLQRS 245


>gi|167564805|ref|ZP_02357721.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia oklahomensis EO147]
 gi|167571973|ref|ZP_02364847.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia oklahomensis C6786]
          Length = 222

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 83/129 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +
Sbjct: 87  PAFVCGMLGLGFYSAAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+     
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTINDLMHEGQKIISVSYRSLEVYLAIALVYLVLTQATNY 206

Query: 384 FMNRLNAKI 392
            ++R+  ++
Sbjct: 207 ALHRVERRL 215


>gi|291539690|emb|CBL12801.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Roseburia intestinalis
           XB6B4]
          Length = 513

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 115/211 (54%), Gaps = 24/211 (11%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243
           I V + ++G+V   F   + R  H++ G      AL  LY++  ++ G P ++ + + Y 
Sbjct: 315 ITVLALLVGVVFG-FLIAIVRTNHDRNGGLTILNALCKLYLT--IVRGTPVMIQLLIIYY 371

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F     G+             +   IA    +AA++AEIVRSG++AV  GQ EA  +L
Sbjct: 372 VIFQSIDTGKI------------VVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 419

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +++    ++LPQA+++I+P L +++++LLK +S++  +G  DL   G  I + T +A
Sbjct: 420 GLNYKQTMMSIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLTKGGDIIRSVTYEA 479

Query: 364 ----IEIILIWMFIYLSLSIMIALFMNRLNA 390
               I + LI++ + + LS ++ L   +L +
Sbjct: 480 FMPLIAVALIYLIMVMGLSKVVNLLERKLRS 510


>gi|308067589|ref|YP_003869194.1| Glutamine transport system permease protein glnP [Paenibacillus
           polymyxa E681]
 gi|305856868|gb|ADM68656.1| Glutamine transport system permease protein glnP [Paenibacillus
           polymyxa E681]
          Length = 482

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 17/200 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F+LG+V            H K  + +  +++  F   G+P   LI L + ++F  P   
Sbjct: 297 AFILGLVFGFMKVS-----HNKVFRGIATVFVDIFR--GIP---LIVLAFFIYFGIPQAL 346

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F         P F++  + LS    A++ EI+R G+ ++  GQMEAA +LGL +R A  
Sbjct: 347 DFKM-------PLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQMEAARSLGLPYRTAML 399

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA++ +IP   +Q +  LK++S+   +G  +L   G  II +T Q+ +I L+   
Sbjct: 400 KIILPQAVKIMIPSFINQLVITLKDTSILSVIGLVELTQSGKIIIARTFQSFDIWLVVAV 459

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           +YL +  ++    NRL  ++
Sbjct: 460 MYLIVITVLTKISNRLEGRV 479



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 24/173 (13%)

Query: 71  EIDQGIVPYTSD-----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           E  +G+ P  +      S+   +++ G  NT       ++ A I+G + G  ++S NK+ 
Sbjct: 256 ESGKGVAPVETSRWGLISASLPSLIKGMGNTLLYTLVSLLVAFILGLVFGFMKVSHNKVF 315

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             I  V+V++FR IP +V+ FF+Y        IP     L F M L         LT+  
Sbjct: 316 RGIATVFVDIFRGIPLIVLAFFIY------FGIPQ---ALDFKMPL----FVAAVLTLSL 362

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           NA  +V   + G + S+   ++      +  ++L L Y +  L   LP  V I
Sbjct: 363 NAGAYVTEIIRGGIQSIDPGQM------EAARSLGLPYRTAMLKIILPQAVKI 409


>gi|304414486|ref|ZP_07395706.1| putative polar amino acid ABC transporter permease [Candidatus
           Regiella insecticola LSR1]
 gi|304283204|gb|EFL91606.1| putative polar amino acid ABC transporter permease [Candidatus
           Regiella insecticola LSR1]
          Length = 245

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 2/110 (1%)

Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           Q  F+G +   P  EF+S    L  Y+AAFIAE +R+G+  V  GQ  AA ALGLT+ ++
Sbjct: 99  QAVFLGITLSWPSFEFLSGLTGLILYSAAFIAEELRAGINGVASGQKYAAHALGLTNWQS 158

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            R V+LPQA++  +PPL  QY+N++KNSSL +A+G A+L      +  +T
Sbjct: 159 MRYVILPQALKISMPPLLGQYMNIIKNSSLTMAIGVAELSYASRQVETET 208



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 39/67 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T WL+    + AT++G L+   R S  + + W   +Y  +FRN P L+ +FF Y +
Sbjct: 22  GFLLTLWLSSCTSVIATLLGFLLATARDSHLRALQWPVMLYSALFRNTPLLIQLFFWYFA 81

Query: 152 VLSVLPI 158
           V  +LP+
Sbjct: 82  VSKILPV 88


>gi|149204303|ref|ZP_01881270.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. TM1035]
 gi|149142188|gb|EDM30235.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. TM1035]
          Length = 200

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 77/125 (61%), Gaps = 4/125 (3%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            PEF++  +AL  YTA+ +AE VR+G+ AVP G   AA A G+   +  R VLLP + R 
Sbjct: 61  QPEFVTAVVALGLYTASRVAEQVRAGIEAVPSGLKSAATAQGMGVAQVYRYVLLPISFRL 120

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLS 378
           I+PP+TS++L + KNSSLA+ +G  +L +    I   T Q+ E      +I++FI L  +
Sbjct: 121 IVPPMTSEFLTVFKNSSLALTIGLLELTAQSQQIAEYTFQSFEAYTAATVIYVFIALCAT 180

Query: 379 IMIAL 383
           I++ +
Sbjct: 181 IVMTV 185



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 34/48 (70%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +G+LVG GR   NK+V+ +C  YVE+FRN+P LV +F  Y +V  +LP
Sbjct: 1   MGSLVGVGRTLPNKVVSTLCTTYVELFRNVPLLVQMFIWYFAVPEMLP 48


>gi|66046174|ref|YP_236015.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256881|gb|AAY37977.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 219

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV +   Y   F  P+     F+G S   P F    + LS + A+ + E+VR GL +
Sbjct: 66  IPVLVWL---YLFFFGLPI-----FLGVSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EA +A+GL   +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  
Sbjct: 116 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375
           VG  II +T    E +LI+ F++L
Sbjct: 176 VGQQIIERT---YESVLIYGFLFL 196


>gi|152981390|ref|YP_001351970.1| glutamate/aspartate ABC type transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|151281467|gb|ABR89877.1| glutamate/aspartate ABC type transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 243

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 26/215 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           ++F+FV+G ++ +  T   R      G      + +PLL       F +P LV     + 
Sbjct: 36  WIFAFVVGSIVGVGRTSEKRWLVRLGGAYVELFRNIPLLVQFFVWYFVVPGLVPAVKAWV 95

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  D                 +F++  + L  +T++ IAE VRSG+ A+PRGQ  A  AL
Sbjct: 96  ITLDP-------------TEHQFVTAVVCLGFFTSSRIAEQVRSGIQALPRGQRNAGYAL 142

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R VLLP A R IIPPLTS+ +NL+KN+++A ++G  +L      +   T + 
Sbjct: 143 GLTTAQTYRYVLLPMAYRIIIPPLTSELMNLIKNTAVAYSIGLVELFFRTREMGEMTFRY 202

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E       IY    ++IA+  NRL   +AL E++
Sbjct: 203 FEAFGAATLIY----VVIAMTANRL---MALVERR 230



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 72  IDQGI----VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +D GI    VP   D ++  ++L G   T  +A    I A ++G++VG GR S  + +  
Sbjct: 1   MDLGIFLEQVP-DGDGTWLESLLSGLGWTLAVALFAWIFAFVVGSIVGVGRTSEKRWLVR 59

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +   YVE+FRNIP LV  F  Y  V  ++P
Sbjct: 60  LGGAYVELFRNIPLLVQFFVWYFVVPGLVP 89


>gi|306832994|ref|ZP_07466126.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus bovis ATCC 700338]
 gi|304424893|gb|EFM28027.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus bovis ATCC 700338]
          Length = 228

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 105/178 (58%), Gaps = 12/178 (6%)

Query: 223 YISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSC 275
           +I++F ++   G P +V I + +  +HF+   +     +G   +  +F  L    I +S 
Sbjct: 51  WIASFYVWVFRGTPMVVQIMIAFAWMHFNNAPI-----VGFGVLDLDFSRLLPGIIIISL 105

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A+I+EIVR+G+ AVP+GQ+EAA +LG+    A R V+LPQA+++I+P L ++++ ++
Sbjct: 106 NSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITII 165

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           K+SSL   +G  +L +   +++  T   I  +L   F YL ++ +++  + RL  ++ 
Sbjct: 166 KDSSLLQTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVMSFLVKRLEKRMG 223


>gi|289672926|ref|ZP_06493816.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. syringae FF5]
          Length = 226

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV +   Y   F  P+     F+G S   P F    + LS + A+ + E+VR GL +
Sbjct: 73  IPVLVWL---YLFFFGLPI-----FLGLSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EA +A+GL   +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  
Sbjct: 123 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 182

Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375
           VG  II +T    E +LI+ F++L
Sbjct: 183 VGQQIIERT---YESVLIYGFLFL 203


>gi|15677362|ref|NP_274517.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis MC58]
 gi|121635180|ref|YP_975425.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria meningitidis FAM18]
 gi|218768491|ref|YP_002343003.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria meningitidis Z2491]
 gi|254805275|ref|YP_003083496.1| putative amino acid ABC transporter [Neisseria meningitidis
           alpha14]
 gi|7226752|gb|AAF41865.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis MC58]
 gi|120866886|emb|CAM10645.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria meningitidis FAM18]
 gi|121052499|emb|CAM08838.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria meningitidis Z2491]
 gi|254668817|emb|CBA06816.1| putative amino acid ABC transporter [Neisseria meningitidis
           alpha14]
 gi|254670681|emb|CBA06791.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha153]
 gi|254673241|emb|CBA08243.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha275]
 gi|261392244|emb|CAX49764.1| putative amino acid ABC transporter permease protein [Neisseria
           meningitidis 8013]
 gi|308389654|gb|ADO31974.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis alpha710]
 gi|316986034|gb|EFV64971.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Neisseria
           meningitidis H44/76]
 gi|319410739|emb|CBY91122.1| putative amino acid ABC transporter permease protein [Neisseria
           meningitidis WUE 2594]
 gi|325128575|gb|EGC51447.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           N1568]
 gi|325130591|gb|EGC53338.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           OX99.30304]
 gi|325132674|gb|EGC55359.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           M6190]
 gi|325134674|gb|EGC57314.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           M13399]
 gi|325136597|gb|EGC59198.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           M0579]
 gi|325138562|gb|EGC61125.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           ES14902]
 gi|325140663|gb|EGC63180.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           CU385]
 gi|325142710|gb|EGC65090.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           961-5945]
 gi|325144801|gb|EGC67092.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           M01-240013]
 gi|325198631|gb|ADY94087.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis G2136]
 gi|325199888|gb|ADY95343.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis H44/76]
 gi|325201799|gb|ADY97253.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis M01-240149]
 gi|325204486|gb|ADY99939.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis M01-240355]
 gi|325205744|gb|ADZ01197.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis M04-240196]
 gi|325208448|gb|ADZ03900.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis NZ-05/33]
          Length = 248

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|288904828|ref|YP_003430050.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|306830860|ref|ZP_07464022.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977757|ref|YP_004287473.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731554|emb|CBI13109.1| Putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
 gi|304426883|gb|EFM29993.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177685|emb|CBZ47729.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 228

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 105/178 (58%), Gaps = 12/178 (6%)

Query: 223 YISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSC 275
           +I++F ++   G P +V I + +  +HF+   +     +G   +  +F  L    I +S 
Sbjct: 51  WIASFYVWVFRGTPMVVQIMIAFAWMHFNNAPI-----VGFGVLDLDFSRLLPGIIIISL 105

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A+I+EIVR+G+ AVP+GQ+EAA +LG+    A R V+LPQA+++I+P L ++++ ++
Sbjct: 106 NSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITII 165

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           K+SSL   +G  +L +   +++  T   I  +L   F YL ++ +++  + RL  ++ 
Sbjct: 166 KDSSLLQTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVMSFLVKRLEKRMG 223


>gi|304387087|ref|ZP_07369338.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Neisseria meningitidis ATCC 13091]
 gi|304338836|gb|EFM04939.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Neisseria meningitidis ATCC 13091]
          Length = 248

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|293605113|ref|ZP_06687505.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292816516|gb|EFF75605.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 222

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 80/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L  Y+ A+++EIVR  + +V RGQ EAA +LG++  +A R+++LPQA+  +
Sbjct: 87  PAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E  L+   IYL L+    L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVVALIYLVLTTAAML 206

Query: 384 FMNRLNAKI 392
            + ++   +
Sbjct: 207 ILRKVEQHL 215



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 17/151 (11%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIF 146
           +++ G V T  +    ++   ++G LVG GRL+  + V + +C VY+  FR  P LV +F
Sbjct: 14  SLMRGAVVTIEVTAGALLLGCVMGLLVGVGRLNPKRYVIYNLCSVYLLFFRGTPLLVQLF 73

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FA 204
             +        +P   + LP          +   L +   +  +V   V G + S+    
Sbjct: 74  IWF------FGLPQFGVTLP--------AFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQ 119

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           T  +R     +G+A+ ++ +   ++  +P L
Sbjct: 120 TEAARSLGMSSGQAMRIIILPQAVVRMIPPL 150


>gi|28377715|ref|NP_784607.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|308179877|ref|YP_003924005.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270548|emb|CAD63452.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|308045368|gb|ADN97911.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 213

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 23/221 (10%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           +GL +   T+ ++    VFS ++G + ++F    SR     T + +  +YI  F    +P
Sbjct: 14  QGLGY---TLLSSVIALVFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIFR--NIP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV IA+ + +     V     F  G+          I L+ YT++FIAE VR+G+ +V 
Sbjct: 64  LLV-IAMFFYVIIPMYVAKIDGFTAGT----------IGLTIYTSSFIAETVRAGIQSVD 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSV 352
            GQME A A G+T+ +A   ++LPQA + IIPPL +Q++NL+KNSS LA   GF DL+  
Sbjct: 113 PGQMEGARANGMTYWQAMSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGF-DLMYQ 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +I + +   I   ++    YL +++ ++ +M  L  K+A
Sbjct: 172 ANSIASLSLDTINSYVVVGVFYLIITLPLSYYMRHLEKKLA 212



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y + ++ G   T   +   ++ +TIIGT+     +  ++ +  I RVY+E+FRNIP L
Sbjct: 6   THYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLL 65

Query: 143 VVIFFLY 149
           V+  F Y
Sbjct: 66  VIAMFFY 72


>gi|224582498|ref|YP_002636296.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|224467025|gb|ACN44855.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
          Length = 224

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLQWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|254475048|ref|ZP_05088434.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ruegeria sp. R11]
 gi|214029291|gb|EEB70126.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ruegeria sp. R11]
          Length = 273

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 8/193 (4%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           R S  F+ +  + +P++ +  ++ F L P LV +       F    +   NF       P
Sbjct: 86  RQSARFYIEVVRGIPIIVLLLYVAFVLAPALVELRNWIGAQFGLDPIRTRNF-------P 138

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
                 IAL    +AFI+E+ R+GL +V  GQ+EAA ALGL   +  R ++ PQA+R+I+
Sbjct: 139 LLWRAIIALMIAYSAFISEVFRAGLQSVDEGQIEAAKALGLNRWQRFRFIVFPQAIRTIL 198

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL + ++ L+K+SSL   +G AD+  +G        +  E   +   IYL+L+I ++L 
Sbjct: 199 PPLGNDFVALVKDSSLVSVLGVADVTQLGKITAVGNFRYFETYNVVALIYLTLTIGLSLA 258

Query: 385 MNRLNAKIALKEK 397
           + RL   +  +++
Sbjct: 259 LRRLEKHLRSRQE 271


>gi|16759615|ref|NP_455232.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29142612|ref|NP_805954.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|62179261|ref|YP_215678.1| glutamate/aspartate ABC transporter [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161615119|ref|YP_001589084.1| hypothetical protein SPAB_02887 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168236650|ref|ZP_02661708.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168264404|ref|ZP_02686377.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|194738377|ref|YP_002113774.1| glutamate/aspartate ABC transporter permease GltK [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|207856128|ref|YP_002242779.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213052444|ref|ZP_03345322.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213425080|ref|ZP_03357830.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213609635|ref|ZP_03369461.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213852459|ref|ZP_03381991.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|238911614|ref|ZP_04655451.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|289823919|ref|ZP_06543519.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|25296623|pir||AD0583 glutamate/aspartate transport system permease protein GltK STY0708
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|16501907|emb|CAD05134.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29138243|gb|AAO69814.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|62126894|gb|AAX64597.1| ABC superfamily (membrane), glutamate/aspartate transporter
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364483|gb|ABX68251.1| hypothetical protein SPAB_02887 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194713879|gb|ACF93100.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290346|gb|EDY29702.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|205347092|gb|EDZ33723.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206707931|emb|CAR32220.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|322613211|gb|EFY10154.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322621279|gb|EFY18136.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322623699|gb|EFY20537.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322628971|gb|EFY25750.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322631693|gb|EFY28447.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322637571|gb|EFY34273.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322641911|gb|EFY38541.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322646755|gb|EFY43261.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322651456|gb|EFY47836.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322653093|gb|EFY49427.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322658813|gb|EFY55068.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322664917|gb|EFY61110.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322668919|gb|EFY65071.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322670575|gb|EFY66708.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322675316|gb|EFY71392.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322682213|gb|EFY78238.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322684958|gb|EFY80955.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|322713727|gb|EFZ05298.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323193984|gb|EFZ79186.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323197924|gb|EFZ83046.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323202029|gb|EFZ87089.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323207162|gb|EFZ92115.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323210931|gb|EFZ95794.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323214311|gb|EFZ99062.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323219284|gb|EGA03775.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323225505|gb|EGA09735.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323231064|gb|EGA15180.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323234104|gb|EGA18193.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323238201|gb|EGA22259.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323242565|gb|EGA26589.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323248458|gb|EGA32392.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251327|gb|EGA35199.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323259255|gb|EGA42898.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323264844|gb|EGA48345.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323272319|gb|EGA55726.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 224

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|307708519|ref|ZP_07644984.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           NCTC 12261]
 gi|307615435|gb|EFN94643.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           NCTC 12261]
          Length = 227

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 118/211 (55%), Gaps = 17/211 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFD 247
           F  +LG+VL+         F +++ K  PL++++   ++   G P +V I + + L H +
Sbjct: 30  FGTILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHIN 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P + Q   +G        +   + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  
Sbjct: 80  APTI-QVGILGVDL--SRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRP 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +
Sbjct: 137 KNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPL 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L   F YL ++ ++ + +     ++   +KK
Sbjct: 197 LFAAFYYLIMTSILTVALKAFEKRMGQGDKK 227


>gi|77407242|ref|ZP_00784203.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77174148|gb|EAO77056.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 214

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 8/114 (7%)

Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           + P+L Q  F+         G  +   F +  + +  Y  A+I+E++RSG+ AVP+GQ E
Sbjct: 73  NTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTE 132

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           AA+A G T  +  +L++LPQA+R+I+PP+T+Q +NL+KN+S    +  AD++ V
Sbjct: 133 AALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISGADIMFV 186


>gi|283834047|ref|ZP_06353788.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291070190|gb|EFE08299.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 224

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y   S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 39.7 bits (91), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLIITLKITVTAVVIGIVWGTILAVMRLSSFAPIAWFAKGYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|254424601|ref|ZP_05038319.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196192090|gb|EDX87054.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 225

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 24/180 (13%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL +  F+I FG+P LV     + L F       FN  G +          + LS 
Sbjct: 63  RGTPLL-VQLFMIYFGVPALVR---TFGLDFT------FNQWGAAV---------LGLSL 103

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            +AA++AEIVR+G+ ++  GQ EAA +LGL   +  + V+ PQA+R ++PPL ++++ LL
Sbjct: 104 NSAAYLAEIVRAGIQSIEVGQKEAAESLGLDSSQTMQYVVFPQALRRMVPPLGNEFITLL 163

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM----IALFMNRLNAK 391
           K++SL   +G+ +L   G  I+ +  ++ EI      IYL+L+++     +L   RL+ K
Sbjct: 164 KDTSLVAVIGYQELFRQGQLIVARNFRSFEIFFAVALIYLALNVIASQAFSLLERRLDPK 223


>gi|238786810|ref|ZP_04630611.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia frederiksenii ATCC
           33641]
 gi|238725178|gb|EEQ16817.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia frederiksenii ATCC
           33641]
          Length = 255

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISLVYWVITFLLSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMEKRFGKSDSR 254


>gi|310778139|ref|YP_003966472.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309747462|gb|ADO82124.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 236

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 116/209 (55%), Gaps = 21/209 (10%)

Query: 196 LGIVLSLFATRLSRHFH-----EKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFD 247
           +G++L++   RLS HF+     EK  K  PL  I+ +   +I G P +V      QL   
Sbjct: 41  VGVLLAVM--RLS-HFYPFKNTEKYKKTNPLNLIALWYIDIIRGTPAVV------QLM-- 89

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             VL    F+G    +P F+   +A    ++A++AEI+R+G+  + +GQ EA+ ALG+ +
Sbjct: 90  --VLANVVFVGNLRNTPIFVVAALAFGLNSSAYVAEIIRAGIEGLDKGQTEASRALGMNY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               + +++PQA+++I+P L S+++ LLK +S+   +G  DL+     I +QT + IE +
Sbjct: 148 FLTMKEIIIPQAIKNILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGIEPL 207

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L    IYL ++ +   FM ++   + + +
Sbjct: 208 LAVGLIYLIMTSIFTKFMRKVEKGLKVSD 236


>gi|300362096|ref|ZP_07058273.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300354715|gb|EFJ70586.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 544

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+   + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++
Sbjct: 416 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 475

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L+     +   T + +  + I M IY  ++  +   +N    
Sbjct: 476 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFVMTFSLTRLLNHFEK 535

Query: 391 KI 392
           ++
Sbjct: 536 RM 537


>gi|167628304|ref|YP_001678803.1| glutamine abc transporter, glutamine-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
 gi|167591044|gb|ABZ82792.1| glutamine abc transporter, glutamine-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
          Length = 217

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 79/122 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT A+I E+ R+G+ AVP+GQMEAA + G+ + +A   V+LPQA++ I+PPLT+Q
Sbjct: 92  IGLAMYTGAYIGEVFRAGIQAVPKGQMEAARSSGMNYLQAMGYVVLPQAVKIILPPLTNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +N++KNS++   +  ADL+     I ++T    E+ +    +YL +++ ++   N L  
Sbjct: 152 VVNMVKNSAILSTIVVADLMYETYRIASETFIIFEVFIFAALLYLVITVPLSTVANLLEQ 211

Query: 391 KI 392
           ++
Sbjct: 212 RL 213


>gi|293392788|ref|ZP_06637106.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291424647|gb|EFE97858.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 254

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++P
Sbjct: 121 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 180

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 181 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFVLSLMV 240

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 241 QHMEKRFGKSDSR 253


>gi|328886197|emb|CCA59436.1| amino acid ABC transporter, permease protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 214

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VPRGQ EAA +LG+T  +    V+LPQA R++IPP+ S 
Sbjct: 89  LALGCYTSAFICEALRSGINTVPRGQGEAARSLGMTFSQTLGTVVLPQAFRTVIPPIGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
            + L KNS++A A    +L+    T +++ G  I    +W+ + YL +++ I+   N L 
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LSELGYNIVWTFVWIAVGYLIITLGISALFNVLE 207

Query: 390 AK 391
            +
Sbjct: 208 KR 209


>gi|219847285|ref|YP_002461718.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus aggregans DSM 9485]
 gi|219541544|gb|ACL23282.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus aggregans DSM 9485]
          Length = 410

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 79/125 (63%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++ ++AA++AE VR GL A+PRGQ+EAA ALGL   + T L+ LPQA+R+++P L  Q
Sbjct: 277 VAVTLFSAAYLAENVRGGLQAIPRGQVEAARALGLNVVQTTLLITLPQALRAVVPVLVGQ 336

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNR 387
           ++ L K++SL V +G  DL+     I+ Q         +W   +L ++ +  LF   M+R
Sbjct: 337 FIALFKDTSLVVIIGLVDLLGAAQNIVGQPQWLGTPGGVWRETFLVIAAVYWLFSFTMSR 396

Query: 388 LNAKI 392
           ++ +I
Sbjct: 397 VSKRI 401


>gi|317506458|ref|ZP_07964259.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
 gi|316255219|gb|EFV14488.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
          Length = 508

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 87/144 (60%), Gaps = 7/144 (4%)

Query: 260 STVSPEFMS------LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           S  SP F+S        + L+ YT+AF+A+ +RSG+  VP GQ+EAA +LG    K  RL
Sbjct: 365 SERSPTFISDNNFWLAVLGLAAYTSAFVADALRSGVNTVPIGQVEAARSLGFGFTKVLRL 424

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTGQAIEIILIWMF 372
           ++LPQA R++I PL SQ++ L +N+++A A+G A+   +   +I N++ +  E+  ++  
Sbjct: 425 IVLPQAFRAVIRPLGSQFIALARNTTVASAIGVAEAALLMKEMIENESDRLFEVFGVFAL 484

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           ++ + S++     N L  K+ ++ 
Sbjct: 485 VFGAFSVLFGFLFNVLGRKLEVRR 508


>gi|294628576|ref|ZP_06707136.1| amino acid ABC transporter, permease [Streptomyces sp. e14]
 gi|292831909|gb|EFF90258.1| amino acid ABC transporter, permease [Streptomyces sp. e14]
          Length = 286

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 116/213 (54%), Gaps = 19/213 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RGL    LT+   A +    F LG +L++F  RLS +      +A+   Y+  +L   +P
Sbjct: 73  RGL---WLTLWLTAVVMALGFALGTLLAVF--RLSAN---PVLRAVSWGYV--WLFRSIP 122

Query: 234 TLVLIALKYQLHFDKP-VLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LV + L + +    P VLG    +  G  TV+       I L+ + AA+ AE+VR G++
Sbjct: 123 ILVQLLLWFNIGALYPRVLGVQTVDLFGPVTVA------IIGLTLHEAAYAAEVVRGGIL 176

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RGQ+EAA ALGL+  +  R ++LPQAMRSI+PP  +  +  LK +S+   +   DL+
Sbjct: 177 SVDRGQIEAAQALGLSRWRRWRRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSVIAVQDLL 236

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
                I +QT Q I ++++    Y  ++ +++L
Sbjct: 237 YSTQLIYHQTYQVIPLLMVATLWYTVVTSVLSL 269



 Score = 36.2 bits (82), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 11/83 (13%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +TSDS     +L G   T WL    M     +GTL+   RLSAN ++  +   YV +FR+
Sbjct: 66  FTSDS-----VLRGLWLTLWLTAVVMALGFALGTLLAVFRLSANPVLRAVSWGYVWLFRS 120

Query: 139 IPPLVVIFF------LYKSVLSV 155
           IP LV +        LY  VL V
Sbjct: 121 IPILVQLLLWFNIGALYPRVLGV 143


>gi|199598208|ref|ZP_03211630.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|258508351|ref|YP_003171102.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|199590969|gb|EDY99053.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|257148278|emb|CAR87251.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259649665|dbj|BAI41827.1| amino acid ABC transporter permease and substrate binding
           components [Lactobacillus rhamnosus GG]
          Length = 485

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 83/130 (63%), Gaps = 4/130 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  IA+S  +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+    V+LPQA+++I
Sbjct: 353 PALVAGLIAVSLNSAAYVAEIIRSGIDSIPIGQTEAARSLGLSERQTMTSVVLPQAIKNI 412

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379
            P L +++++L+K SS+   +G  DL+     +   T + ++ ILI M +Y      LS 
Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILIAMVLYFVLTFGLSK 472

Query: 380 MIALFMNRLN 389
           +++ F  ++N
Sbjct: 473 LLSHFERKMN 482


>gi|16764040|ref|NP_459655.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56414208|ref|YP_151283.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|167550799|ref|ZP_02344555.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|167990672|ref|ZP_02571772.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168240512|ref|ZP_02665444.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168465840|ref|ZP_02699722.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168820212|ref|ZP_02832212.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194450507|ref|YP_002044698.1| glutamate/aspartate ABC transporter permease GltK [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|197264070|ref|ZP_03164144.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197363131|ref|YP_002142768.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|198245682|ref|YP_002214651.1| glutamate/aspartate ABC transporter permease GltK [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200390497|ref|ZP_03217108.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|16419176|gb|AAL19614.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56128465|gb|AAV77971.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|194408811|gb|ACF69030.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|195631617|gb|EDX50137.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197094608|emb|CAR60130.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|197242325|gb|EDY24945.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197940198|gb|ACH77531.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602942|gb|EDZ01488.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205324183|gb|EDZ12022.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205330901|gb|EDZ17665.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205339786|gb|EDZ26550.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205343124|gb|EDZ29888.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|261245935|emb|CBG23737.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267992397|gb|ACY87282.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157263|emb|CBW16751.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|312911695|dbj|BAJ35669.1| glutamate/aspartate ABC transporter permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320084936|emb|CBY94725.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321226242|gb|EFX51293.1| Glutamate Aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323128980|gb|ADX16410.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326622406|gb|EGE28751.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 224

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + +I   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVIVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|330877360|gb|EGH11509.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330966688|gb|EGH66948.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 221

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 23/210 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           V   VLG VL+L     ++      G      +++PLL + T+    +P      L++  
Sbjct: 29  VGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWIT 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D P+               F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG
Sbjct: 85  GEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G+A 
Sbjct: 132 MNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRAN 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E ++I   +Y ++S   +L + RL  + A+
Sbjct: 192 EFLIIAGLVYFTISFAASLLVKRLQKRFAV 221



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   ++GT++   RLS+NKL+A +   YV  FR+IP L+VI + Y +
Sbjct: 16  GMVMTLKLMTLGIVGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75

Query: 152 VLSVL 156
           V  VL
Sbjct: 76  VPFVL 80


>gi|294637497|ref|ZP_06715783.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella
           tarda ATCC 23685]
 gi|291089329|gb|EFE21890.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella
           tarda ATCC 23685]
          Length = 225

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 80/130 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A + + AA+ +EI+R+G+ +V RGQ  AA+ALG+T  ++  LV+LPQA R+++
Sbjct: 96  RLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALGMTSWQSMYLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL   FIY  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQLEMILFAGFIYFIISLSASLL 215

Query: 385 MNRLNAKIAL 394
           +N L  + A+
Sbjct: 216 VNHLKKRSAV 225



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + +I   + GT +   RLS  K +AW   +YV +FR++P ++V+ + 
Sbjct: 16  LLDGMVITLQITVTAVIVGILWGTCLAVMRLSRWKPLAWFAALYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  V S+L
Sbjct: 76  YLVVPSLL 83


>gi|134093509|ref|YP_001098584.1| glutamate/aspartate ABC transporter permease [Herminiimonas
           arsenicoxydans]
 gi|133737412|emb|CAL60455.1| Glutamate/aspartate transport system permease protein gltJ
           [Herminiimonas arsenicoxydans]
          Length = 243

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 19/166 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           ++F+FVLG ++ +  T   R      G      + +PLL       F +P LV     + 
Sbjct: 36  WIFAFVLGSLIGIARTTEKRWLVGLGGAYVELFRNIPLLVQFFVWYFVIPGLVPAVKTWV 95

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  D P + QF            ++  I L  +T++ IAE VRSG+ ++PRGQ  A  AL
Sbjct: 96  ITLD-PTIHQF------------VTAIICLGFFTSSRIAEQVRSGIQSLPRGQRNAGYAL 142

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           GLT  +  R VLLP A R IIPPLTS+ +NL+KN+++A ++G  +L
Sbjct: 143 GLTGMQTYRFVLLPMAYRIIIPPLTSELMNLIKNTAVAYSIGLVEL 188



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            D ++   +L G   T  +AF   I A ++G+L+G  R +  + +  +   YVE+FRNIP
Sbjct: 13  GDGTWGYMLLSGLGWTLAVAFFAWIFAFVLGSLIGIARTTEKRWLVGLGGAYVELFRNIP 72

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV  F  Y  +  ++P
Sbjct: 73  LLVQFFVWYFVIPGLVP 89


>gi|225620483|ref|YP_002721740.1| amino acid transport system permease [Brachyspira hyodysenteriae
           WA1]
 gi|225215302|gb|ACN84036.1| amino acid transport system permease protein [Brachyspira
           hyodysenteriae WA1]
          Length = 237

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 121/223 (54%), Gaps = 22/223 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL----PLLYISTF-- 227
           +GL F   ++ T A   V   +LGI+++L   +LS  +  K  K L    PL  ++ +  
Sbjct: 23  KGLLF---SVGTTACATVIGIILGILVALL--QLSEFYPFKNSKKLRDFNPLSKLAFWYV 77

Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G P +V      QL     V+    F+     +P  +   IA    + A++AEI+R
Sbjct: 78  NILRGTPVVV------QLMIWANVI----FVDNLRDTPILIIAAIAFGINSGAYVAEIIR 127

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ +GQMEAA ALG+ +  + + +++PQA++ I+PPL S+++ LLK +S+   +G 
Sbjct: 128 AGIQSLDKGQMEAARALGMNYSMSMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFIGG 187

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            DL+     I +QT + +E ++    IY  L+ + A+ M ++ 
Sbjct: 188 VDLLRSANIITSQTYRGVEPLIAVGIIYFILTSVFAMIMKKVE 230


>gi|28871315|ref|NP_793934.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213970848|ref|ZP_03398971.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301384516|ref|ZP_07232934.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060678|ref|ZP_07252219.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302130491|ref|ZP_07256481.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28854566|gb|AAO57629.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213924371|gb|EEB57943.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 221

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 23/210 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           V   VLG VL+L     ++      G      +++PLL + T+    +P      L++  
Sbjct: 29  VGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWIT 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D P+               F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG
Sbjct: 85  GEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G+A 
Sbjct: 132 MNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRAN 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E ++I   +Y ++S   +L + RL  + A+
Sbjct: 192 EFLIIAGLVYFTISFAASLLVKRLQKRFAV 221



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   ++GT++   RLS+NKL+A +   YV  FR+IP L+VI + Y +
Sbjct: 16  GMVMTLKLMSLGIVGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75

Query: 152 VLSVL 156
           V  VL
Sbjct: 76  VPFVL 80


>gi|237730631|ref|ZP_04561112.1| glutamate/aspartate transport system permease GltK [Citrobacter sp.
           30_2]
 gi|226906170|gb|EEH92088.1| glutamate/aspartate transport system permease GltK [Citrobacter sp.
           30_2]
          Length = 224

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y   S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 39.7 bits (91), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLIITLKITVTAVVIGIVWGTILAVMRLSSFAPIAWFAKGYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|332041345|gb|EGI77707.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 231

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 4/133 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E ++  +AL+ Y AAF+ E +RSG+ +VP  Q EA  ALGL      R ++LPQA+R   
Sbjct: 99  EAIAAVVALTLYAAAFMGEDLRSGIRSVPAVQFEAGRALGLGFLPTMRFIILPQALRIAT 158

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI--- 381
           PPL SQ LNL KNSSLA  +G A+L+     +  +T ++ E        YL++S+ I   
Sbjct: 159 PPLLSQTLNLWKNSSLATVIGTAELMYAAAKVETETFRSFEAFAFATVCYLTVSLAIGAL 218

Query: 382 -ALFMNRLNAKIA 393
            A F  R   + A
Sbjct: 219 AAWFARRYPPRSA 231


>gi|218438819|ref|YP_002377148.1| polar amino acid ABC transporter inner membrane protein [Cyanothece
           sp. PCC 7424]
 gi|218171547|gb|ACK70280.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7424]
          Length = 513

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 23/250 (9%)

Query: 167 FGMFLNNRGLSFPTL---TMDTNAKIFVFSFVL----GIVLSLFATRLSRHFHEKTGKAL 219
           FG+      LS P+L     D N  +F  +       G V+++  T  S  F    G  +
Sbjct: 258 FGISPPELPLSAPSLDTENQDFNPTVFYVNLFRNLFRGAVITVILTAFSVFFGLIGGTLV 317

Query: 220 PLLYISTFLIF------------GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            L  IS + I             G P LV +   + ++F  P L Q  ++G       F 
Sbjct: 318 ALALISPYQILRLLFRIYVDFFRGTPMLVQL---FIIYFGLPALFQ-QYLGIEWSLDRFP 373

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +ALS   AA++AEI+R G+ ++ +GQ EA  +LG+T  +  + V+ PQA R I+PPL
Sbjct: 374 AAVMALSLNVAAYLAEIIRGGIQSIDKGQWEACESLGMTPFQTMQDVIFPQAFRRILPPL 433

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++++ L+K++SL   +GF +L   G  I+  T +A E+ +    +YL L+ + ++    
Sbjct: 434 GNEFITLIKDTSLTAIIGFQELFREGQLIVAVTYKAFEVYIAVALVYLILTTLSSIAFKW 493

Query: 388 LNAKIALKEK 397
           L   +   EK
Sbjct: 494 LETAMNPLEK 503


>gi|227890364|ref|ZP_04008169.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849178|gb|EEJ59264.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 500

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+   + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++
Sbjct: 373 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 432

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L+     +   T + +  + I M IY  ++  +   +N    
Sbjct: 433 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 492

Query: 391 KI 392
           ++
Sbjct: 493 RM 494


>gi|118587431|ref|ZP_01544856.1| glutamine ABC transporter, permease/substrate-binding protein
           [Oenococcus oeni ATCC BAA-1163]
 gi|118432081|gb|EAV38822.1| glutamine ABC transporter, permease/substrate-binding protein
           [Oenococcus oeni ATCC BAA-1163]
          Length = 468

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  GLP L+ + +                       P F++  + L+  
Sbjct: 314 RGLPLLVLAFFIYIGLPHLLNVKI-----------------------PAFVAGILTLTLN 350

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    V+ G ++V +GQMEAA + GL++ +A R V++PQ MR  +P L +Q++  LK
Sbjct: 351 EGAYTGAFVKGGFLSVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLK 410

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T Q  +I  I   IYL +  ++    N + +KI
Sbjct: 411 DTSILQAIGLVELTQTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKI 466


>gi|116491766|ref|YP_811310.1| ABC-type amino acid transport system, permease and periplasmic
           component [Oenococcus oeni PSU-1]
 gi|116092491|gb|ABJ57645.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Oenococcus oeni PSU-1]
          Length = 468

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  GLP L+ + +                       P F++  + L+  
Sbjct: 314 RGLPLLVLAFFIYIGLPHLLNVKI-----------------------PAFVAGILTLTLN 350

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    V+ G ++V +GQMEAA + GL++ +A R V++PQ MR  +P L +Q++  LK
Sbjct: 351 EGAYTGAFVKGGFLSVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLK 410

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T Q  +I  I   IYL +  ++    N + +KI
Sbjct: 411 DTSILQAIGLVELTQTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKI 466


>gi|295096603|emb|CBK85693.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC
           transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 224

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 10/78 (12%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSV 155
            +I   I GTL+   RLS+ K +AW    YV VFR+IP ++V+ + Y       ++VL +
Sbjct: 30  AIIVGIIWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGL 89

Query: 156 LPIPD---HSIVLPFGMF 170
            P  D    S ++ F MF
Sbjct: 90  SPKTDIRLISAMVAFSMF 107


>gi|170724143|ref|YP_001751831.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169762146|gb|ACA75462.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 222

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 30/213 (14%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHF 246
           F  VLG  L+L   RLS        K LPL     +Y+S F   G P LV +   + ++F
Sbjct: 33  FGLVLGFALALM--RLS--------KILPLDWLARIYVSFFR--GTPLLVQL---FVIYF 77

Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P +G + + I  S          I LS   AA+I EI+R+ + ++ RGQ EAA ++G+
Sbjct: 78  GMPQIGIELDPIPAS---------LIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGM 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +A R  +LPQA+R+ +PPL + +++L+K+++LA  +   +L      I  +T +   
Sbjct: 129 TRTQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFT 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + L    +Y  L  ++A F NR+ A++   +++
Sbjct: 189 MYLAVAVVYWILCSILAHFQNRMEARVNQHDQE 221


>gi|148269470|ref|YP_001243930.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga petrophila RKU-1]
 gi|147735014|gb|ABQ46354.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga petrophila RKU-1]
          Length = 216

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 30/178 (16%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PL+ +  FL+ FGLP L        L FD+                 F +  +AL  
Sbjct: 63  RGTPLM-VQLFLVYFGLPEL-------GLEFDR-----------------FTAAVVALGI 97

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A++AEIVR+G+ +VP+GQ EAA +LG++H +A   V+LPQA R I+P L ++++ L 
Sbjct: 98  NSGAYVAEIVRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALA 157

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMIALFMNRLN 389
           K+SSLA+ +G  +L+     I+++T  +  I     LI+  I  S+S ++     RL 
Sbjct: 158 KDSSLAMVIGTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLK 215



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++    IG  VG GRLS  +++ +   +YVE  R  P +V +F +
Sbjct: 15  LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSIYVEFLRGTPLMVQLFLV 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|99080305|ref|YP_612459.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99036585|gb|ABF63197.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 268

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 78/127 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +AFIAE+ R+GL +VP GQ+EAA ALGL+  K  R V+ PQA+R+I+PPL + 
Sbjct: 140 VALMIAYSAFIAEVFRAGLQSVPDGQIEAAKALGLSGWKRFRFVVFPQAIRTILPPLGND 199

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSL   +G  D+  +G        +  E   +   IYL+++I ++L +  L  
Sbjct: 200 FVALVKDSSLVSVLGVLDITQLGKVTAASNFRYFETYNMVALIYLAMTISLSLALRALER 259

Query: 391 KIALKEK 397
            +  K++
Sbjct: 260 HLRSKQE 266


>gi|330901549|gb|EGH32968.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. japonica str. M301072PT]
          Length = 219

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV +   Y   F  P+     F+G S   P F    + LS + A+ + E+VR GL +
Sbjct: 66  IPVLVWL---YLFFFGLPI-----FLGLSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EA +A+GL   +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  
Sbjct: 116 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375
           VG  II +T    E +LI+ F++L
Sbjct: 176 VGQQIIERT---YESVLIYGFLFL 196


>gi|331702183|ref|YP_004399142.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329129526|gb|AEB74079.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 234

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 111/215 (51%), Gaps = 31/215 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           + S++ G++L +      ++     G      + LPL+ I  F  FGLP +         
Sbjct: 32  ILSYIFGVILGIIRYVEIKYLSAIVGFVIDIIRNLPLILIIFFTYFGLPNI--------- 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G    P + S+ IA++ + +A +AEIVR+G++++P GQME A + G
Sbjct: 83  --------------GFKPDPIWASV-IAMAVFESAMVAEIVRAGIVSIPVGQMEGARSTG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363
           +++ +A R ++LPQA++++IP + SQ+++L+K++SLA  +   DL++    I  Q T   
Sbjct: 128 MSYWQALRYIILPQAIKNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQIIYGQNTNYT 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I + L    +Y  +   ++L    L+ ++   +K 
Sbjct: 188 IPMFLALAVMYFIVCYSLSLLSQYLDHRLGTAKKS 222


>gi|93005166|ref|YP_579603.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92392844|gb|ABE74119.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 248

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 4/186 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266
           R    K  +A+   Y++ F    +P LV +   + +   +  P + ++ +   S  +   
Sbjct: 54  RTLPNKGARAIGTAYVTFFR--NIPLLVQLFFWFYIAPGWLTPSIQEWWYKDLSPNTSAM 111

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I L  +TAA I E VR+G+ ++P+GQ+ AA ALG +  +A + VLLPQA R I+PP
Sbjct: 112 LSASIGLGLFTAARIVEQVRTGIESLPQGQINAAYALGFSIPQAYKEVLLPQAFRIILPP 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L+S+  N  KN+S+A  VG  +L+S   TI   T  ++EI      IYL  ++ +   M 
Sbjct: 172 LSSELTNCFKNASVASLVGVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMG 231

Query: 387 RLNAKI 392
            +  K+
Sbjct: 232 LIERKL 237


>gi|311280450|ref|YP_003942681.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749645|gb|ADO49397.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 224

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 10/89 (11%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149
           G + T  +  + ++   + GTL+   RLS+   V+W  + YV VFR++P ++V+ + Y  
Sbjct: 19  GLLITLKITVTAIVIGIVWGTLLAVMRLSSFLPVSWFAKAYVNVFRSVPLVMVLLWFYLI 78

Query: 150 -----KSVLSVLPIPD---HSIVLPFGMF 170
                + VL + P  D    S ++ F MF
Sbjct: 79  VPGFLQQVLGLSPKTDIRLISAMVAFSMF 107


>gi|186471954|ref|YP_001863272.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184198263|gb|ACC76226.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 243

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 6/143 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPV-LGQFNFIGGSTVSP-EFMSLYIALSCYT 277
           PLL    F  FG  TL+  ++   L+    + LG F         P EF++ ++ L+CY 
Sbjct: 64  PLLVQLLFWYFGAATLLPRSMMEWLNAPHAISLGVFTL----AWPPFEFVAGWVGLTCYA 119

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             F+ E  R+G+  V  GQ  AA ALGLT     R V+LPQA+R   PPL  QY+N++KN
Sbjct: 120 TTFVGEEFRAGIRGVASGQHRAAAALGLTPFATFRHVILPQAIRIATPPLAGQYMNIVKN 179

Query: 338 SSLAVAVGFADLVSVGGTIINQT 360
           SSL +A+G A+L      I  +T
Sbjct: 180 SSLTMAIGLAELSYTSRQIDTET 202



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 39/76 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y   +  GF  T  L    ++ AT++G  +   R + +++VA    +YV VFRN P 
Sbjct: 6   EPKYVAWLAHGFGLTLLLCACAIVTATLLGFALALARNARSRVVARAASLYVLVFRNSPL 65

Query: 142 LVVIFFLYKSVLSVLP 157
           LV + F Y    ++LP
Sbjct: 66  LVQLLFWYFGAATLLP 81


>gi|329939723|ref|ZP_08289024.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces griseoaurantiacus M045]
 gi|329301293|gb|EGG45188.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces griseoaurantiacus M045]
          Length = 308

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 6/166 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y +    P+L  G +       ++P F++  + L    AA+++EIVR+G
Sbjct: 113 GTPVLVQLLLWYNIALIFPILNLGFYKDEMNQVMTP-FLAALLGLGLNEAAYMSEIVRAG 171

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  GQ EA+ ALG+T  K  R V+LPQAMR I+PP  ++++N+LK SSLA AV F +
Sbjct: 172 IQSVDMGQTEASHALGMTQGKTLRRVVLPQAMRVIVPPTGNEFINMLKTSSLAYAVQFNE 231

Query: 349 LVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
           L+     I + +   +E+     IW  I  S+  +   ++ R  A+
Sbjct: 232 LIKRSTDISSTSLAVVELYFVASIWYLILTSVFSVGQYYLERRYAR 277


>gi|253575036|ref|ZP_04852375.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845492|gb|EES73501.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 216

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 103/175 (58%), Gaps = 12/175 (6%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P++ +   LI  LP L++I   + + F  P +G    +  +TV+         L+ + AA
Sbjct: 53  PIMLVGVELIRNLPLLLII---FFMRFALPEVGIKLGLVAATVT--------GLTIFEAA 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            I+EIVRSGL ++ +GQ+EAA + GL+  +    ++LPQ +R ++PPL SQ+++LLK++S
Sbjct: 102 MISEIVRSGLASIDKGQIEAARSSGLSAVQTLWHIVLPQGLRRMVPPLVSQFISLLKDTS 161

Query: 340 LAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LAV +   +L+   G +I       I I+L+   IY +++ ++++   +L A+ A
Sbjct: 162 LAVVISLPELMHHAGIVIGHGYTYTIPILLLVALIYFTVNFVLSVISRQLEARRA 216


>gi|146318682|ref|YP_001198394.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           05ZYH33]
 gi|145689488|gb|ABP89994.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           05ZYH33]
          Length = 179

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 92/159 (57%), Gaps = 17/159 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ +G+P L+           + + GQ + I       +F++  IALS  
Sbjct: 20  RGIPLMIVAAFIFWGIPNLI-----------ESMTGQQSPIN------DFVAGTIALSLN 62

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK
Sbjct: 63  SGAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLK 122

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++++  A+G  +L   G  II +  Q+  +  I   IYL
Sbjct: 123 DTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYL 161


>gi|268319123|ref|YP_003292779.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
 gi|262397498|emb|CAX66512.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
          Length = 497

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+   + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++
Sbjct: 370 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 429

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L+     +   T + +  + I M IY  ++  +   +N    
Sbjct: 430 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 489

Query: 391 KI 392
           ++
Sbjct: 490 RM 491


>gi|253689072|ref|YP_003018262.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755650|gb|ACT13726.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 225

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 84/138 (60%), Gaps = 1/138 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T SP F +  IALS  + AF AE+ R  + ++  GQ E A ALG+    A R V+LPQA+
Sbjct: 87  TFSP-FTAAVIALSAQSGAFYAEVYRGAISSIHAGQWEGAKALGMPKSTALRRVILPQAL 145

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R +IPP   +   L+K++SLA ++ +++L+     I +QT + +E+  +   +Y +L ++
Sbjct: 146 RRMIPPFIERSFELIKSTSLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLL 205

Query: 381 IALFMNRLNAKIALKEKK 398
           I+LF   +  +++L +++
Sbjct: 206 ISLFSQHIEKRLSLADRR 223


>gi|42518711|ref|NP_964641.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41582997|gb|AAS08607.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
          Length = 497

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+   + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++
Sbjct: 370 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 429

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L+     +   T + +  + I M IY  ++  +   +N    
Sbjct: 430 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 489

Query: 391 KI 392
           ++
Sbjct: 490 RM 491


>gi|332111812|gb|EGJ11792.1| putative ABC transporter protein glutamate/aspartate transmembrane
           subunit [Rubrivivax benzoatilyticus JA2]
          Length = 245

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 69/105 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+ +  AL  +T+A I+E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R I
Sbjct: 108 PSFVLVVFALGFFTSARISEQVRAGIQSLPRGQRYAGLAMGLTLPQTYRYVLLPMAFRII 167

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +PPLTS+ +N++KNSS+A AV  A+L         +T + IE+ L
Sbjct: 168 VPPLTSEAMNIIKNSSVAFAVSIAELTMFALQAGEETSRNIEMYL 212



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 45/90 (50%)

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           F +E    E+  G      D +Y   ++  +  T  ++   +I A + G+L+G  R + +
Sbjct: 8   FCTETVTGEVLPGCFGRGGDITYLNWLMSAWGWTLSVSALALIVALVFGSLMGILRTTPD 67

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           + + W    + E+FRNIP LV IF  Y ++
Sbjct: 68  RRLVWFGNAWTELFRNIPLLVQIFLWYHAL 97


>gi|330982420|gb|EGH80523.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 219

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV +   Y   F  P+     F+G S   P F    + LS + A+ + E+VR GL +
Sbjct: 66  IPVLVWL---YLFFFGLPI-----FLGLSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EA +A+GL   +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  
Sbjct: 116 IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375
           VG  II +T    E +LI+ F++L
Sbjct: 176 VGQQIIERT---YESVLIYGFLFL 196


>gi|330944618|gb|EGH46568.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 164

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 83/144 (57%), Gaps = 13/144 (9%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV +   Y   F  P+     F+G S   P F    + LS + A+ + E+VR GL +
Sbjct: 11  IPVLVWL---YLFFFGLPI-----FLGLSI--PAFWCAVLVLSLWGASEVGEVVRGGLRS 60

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EA +A+GL   +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  
Sbjct: 61  IPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTK 120

Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375
           VG  II +T    E +LI+ F++L
Sbjct: 121 VGQQIIERT---YESVLIYGFLFL 141


>gi|170758808|ref|YP_001786563.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169405797|gb|ACA54208.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 222

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 104/177 (58%), Gaps = 17/177 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L +  +T+       + + + G++L++      R +  K   ++  +YIS F   G P L
Sbjct: 17  LKYAHITLSIAILSMIIAVLFGVILAVI-----RMYKVKVLHSISEIYISFFR--GTPIL 69

Query: 236 VLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + L Y   +  P ++  F  I      P +M++ IALS   +A++AEI+R  ++++ +
Sbjct: 70  IQLFLFY---YGLPQIIPSFKEI------PAYMAVVIALSMNGSAYMAEIIRGAIMSIDK 120

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           GQMEA+++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG A+++S
Sbjct: 121 GQMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILS 177


>gi|146342963|ref|YP_001208011.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp.
           ORS278]
 gi|146195769|emb|CAL79796.1| glutamate/aspartate ABC transporter (permease protein)
           [Bradyrhizobium sp. ORS278]
          Length = 230

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 114/213 (53%), Gaps = 14/213 (6%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG---------LPTLVLIALKYQL 244
           F+ G+  +L  T LS       G  + ++ +S + + G         + +L L+ + +  
Sbjct: 18  FIDGMTFTLTLTALSAFGGLVFGTLIAMMRLSGYRVMGWIAGLYVDFMRSLPLVLVIFWF 77

Query: 245 HFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +F  P +GQ+  I GS+   +   F S  I    + AA+ +EI+R+G+ ++ RGQ  AA 
Sbjct: 78  YFLVPYIGQW--ITGSSRPIKVGAFASSLITFIMFEAAYFSEIMRAGIQSISRGQPAAAS 135

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT+ +  R V+LPQA R+++P L +Q + L +++SL   +   D +     +  + G
Sbjct: 136 ALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSIPDFLGAASKVAQRDG 195

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +E+ L    +Y ++S + +  + RL ++IA+
Sbjct: 196 RLVEMYLFAALVYFTISCIASYGVRRLQSRIAI 228



 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 4/50 (8%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           AF G++     GTL+   RLS  +++ WI  +YV+  R++P ++VIF+ Y
Sbjct: 33  AFGGLV----FGTLIAMMRLSGYRVMGWIAGLYVDFMRSLPLVLVIFWFY 78


>gi|13472038|ref|NP_103605.1| permease protein of amino acid ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022783|dbj|BAB49391.1| permease protein of amino acid ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 224

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 64/94 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+   A FI EIV +G+ +VP GQ+EAA+A GL+  +  R V+LPQAMR ++P
Sbjct: 89  FTAGIIALTNLAACFICEIVAAGIRSVPTGQVEAALASGLSRWQRMRQVVLPQAMRIVMP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PL  QY+ L+K+SS+  A+G  DL  VG  ++ +
Sbjct: 149 PLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQR 182


>gi|110632402|ref|YP_672610.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283386|gb|ABG61445.1| amino acid ABC transporter membrane protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 309

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 86/142 (60%), Gaps = 6/142 (4%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P LG +     S +SP   +  I L+ + AA++AEI+R GL++V RGQ+EA  A G++  
Sbjct: 150 PELGAWE--TNSLISP-LTAAIIGLALHEAAYMAEIIRGGLLSVDRGQIEATQAFGMSRA 206

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A R V+LPQAMR I+PP  +Q+++++K +SL   +  +DL+     I N+T + I ++L
Sbjct: 207 RALRRVILPQAMRFIVPPSGNQFISMVKATSLVSVIAMSDLLYSVQAIYNRTFEVIPLLL 266

Query: 369 I---WMFIYLSLSIMIALFMNR 387
           +   W    +SL  +   F+ R
Sbjct: 267 VAAAWYLFIVSLLNVGQEFLER 288


>gi|206895967|ref|YP_002246908.1| glutamine ABC transporter, permease protein [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738584|gb|ACI17662.1| glutamine ABC transporter, permease protein [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 216

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 13/146 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K + + YI   LI G P L+ I L Y   F  P LG  N            +  +AL   
Sbjct: 52  KGISIAYIE--LIRGTPALMQIMLVY---FGLPALG-LNI-------DRLTAAVVALGLN 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+  EI R+G+ ++ RGQMEAA A+G+T   A RL++LPQA R +IPPL ++++ LLK
Sbjct: 99  SAAYSGEIFRAGIESIDRGQMEAARAIGMTGSMAMRLIVLPQAFRVVIPPLVNEFVALLK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQ 362
           ++SL   +G ADL+     +I+ T  
Sbjct: 159 DTSLVSVIGVADLMLRSRNMISYTAN 184


>gi|317484847|ref|ZP_07943739.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316923893|gb|EFV45087.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 264

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 97/167 (58%), Gaps = 11/167 (6%)

Query: 233 PTLVLIALKY-QLHFDKPVLGQFNFI----GGSTVSPEFMSLYIALS-CYTAAFIAEIVR 286
           P + LIA  Y ++    P+L Q  +I    G     P  +S  IA+S CY  A++ E+ R
Sbjct: 92  PVINLIASTYVEIIRGVPLLVQLFYIYYALGRIIQVPPMVSAVIAISFCY-GAYMGEVFR 150

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+++VP+GQ EAA +LG  + +   LV+LPQAMR+I+PP+ ++ + +LK++SL   +  
Sbjct: 151 AGILSVPKGQTEAARSLGFNNFQTMTLVILPQAMRTILPPIGNECIAMLKDTSLVSIIAV 210

Query: 347 ADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389
           ADL+  G    +QT    E    I L+++ I L LS  +++   RL 
Sbjct: 211 ADLLRRGREFASQTFDYFETYTVIALVYLIITLLLSKGVSMMEGRLT 257



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 39/68 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++    IG L G GRLS N ++  I   YVE+ R +P LV +F++Y +
Sbjct: 61  GLIITFEVTVLSLLCTLPIGLLTGLGRLSRNPVINLIASTYVEIIRGVPLLVQLFYIYYA 120

Query: 152 VLSVLPIP 159
           +  ++ +P
Sbjct: 121 LGRIIQVP 128


>gi|238758198|ref|ZP_04619377.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia aldovae ATCC 35236]
 gi|238703528|gb|EEP96066.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia aldovae ATCC 35236]
          Length = 255

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++P
Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISVVYWVITFLLSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMEKRFGKSDSR 254


>gi|22536880|ref|NP_687731.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76787176|ref|YP_329464.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798197|ref|ZP_00780448.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|22533730|gb|AAM99603.1|AE014224_6 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76562233|gb|ABA44817.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76586460|gb|EAO62967.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
          Length = 231

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 8/115 (6%)

Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           + P+L Q  F+         G  +   F +  + +  Y  A+I+E++RSG+ AVP+GQ E
Sbjct: 73  NTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTE 132

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           AA+A G T  +  +L++LPQA+R+I+PP+T+Q +NL+KN+S    +  AD++ V 
Sbjct: 133 AALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISGADIMFVA 187


>gi|148546354|ref|YP_001266456.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|167035335|ref|YP_001670566.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|148510412|gb|ABQ77272.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|166861823|gb|ABZ00231.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 248

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 77/128 (60%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S+ I L  +TAA + E VR+G+ A+P+GQ  AA A+G +  +    VLLPQA R IIPP
Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPKGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPP 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M 
Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231

Query: 387 RLNAKIAL 394
            +  K+A+
Sbjct: 232 MVEKKVAV 239



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 32/49 (65%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++G+++G  R   N+LV+ I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 45  LLGSVLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLP 93


>gi|300727963|ref|ZP_07061341.1| ABC-type amino acid transport/signal transduction system
           [Prevotella bryantii B14]
 gi|299774805|gb|EFI71419.1| ABC-type amino acid transport/signal transduction system
           [Prevotella bryantii B14]
          Length = 496

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 116/207 (56%), Gaps = 14/207 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S +LG ++++  T   R+ + K    L  +Y++  ++ G PT+V + + Y + F    
Sbjct: 303 IISLILGSLIAIVRTSHDRNGNMKFLNTLCRVYLT--IVRGTPTMVQLLIIYYVIF---- 356

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                    + VS   +++ +A    +AA++AE++RSG++++ RGQMEA  +LG+++ + 
Sbjct: 357 -------ASADVSKVVVAI-VAFGLNSAAYLAEVIRSGIMSIDRGQMEAGRSLGMSYAQT 408

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA ++++P + ++ + LLK +S++  +G  DL      I + T  A+  + + 
Sbjct: 409 MRFVILPQAYKNVLPAIGNELITLLKETSISGYIGLVDLTKGSDIIRSITYDAMLPLGVV 468

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             IYL L + +   ++R+  K+   E+
Sbjct: 469 ALIYLVLVMSLEAGVSRIEKKLRKNER 495


>gi|261400733|ref|ZP_05986858.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria lactamica ATCC 23970]
 gi|269209498|gb|EEZ75953.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria lactamica ATCC 23970]
          Length = 248

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALVANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|50914605|ref|YP_060577.1| arginine ABC transporter permease [Streptococcus pyogenes
           MGAS10394]
 gi|50903679|gb|AAT87394.1| Arginine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
          Length = 228

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 107/189 (56%), Gaps = 16/189 (8%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDK-PVLG----QFNFIGGSTVSP 264
           K     PL ++    ++   G P +V I + +  +HF+  P +G     F+F   S + P
Sbjct: 42  KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNNMPTIGFGVLDFDF---SRLLP 98

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
                 I +S  + A+I+EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+
Sbjct: 99  GI----IIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNIL 154

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L ++++ ++K+S+L   +G  +L +   +++  T   I  +L+  F YL ++ ++A  
Sbjct: 155 PALGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQL 214

Query: 385 MNRLNAKIA 393
           +  L   +A
Sbjct: 215 LAVLERHMA 223


>gi|46579090|ref|YP_009898.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603329|ref|YP_967729.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|46448503|gb|AAS95157.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563558|gb|ABM29302.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 295

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L+ Y  A+I+EIVR+G+ +VPRGQ +A+ + GL   +  R V+LPQA+R  +P
Sbjct: 165 FLSAVVTLAIYEGAYISEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRHAVP 224

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  Q+++++K+S++   +   +L   G  ++  T Q  EI      +YL L++  +L  
Sbjct: 225 PLAGQFISIIKDSAIVSVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCSLVA 284

Query: 386 NRLNAK 391
            RL  +
Sbjct: 285 ERLERR 290


>gi|317407536|gb|EFV87487.1| hypothetical protein HMPREF0005_05080 [Achromobacter xylosoxidans
           C54]
          Length = 200

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 4/175 (2%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F R+ F  D R  ++  Q+++A        W   N + N+ +  +++G  +L E A F I
Sbjct: 2   FKRLWF--DGRARSVLAQLLIAGAFVGGVGWLAWNAHANLTQRGIAMGFDYLGEAARFPI 59

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            + ++ Y    SY  A LVG VNT +++   +  +T++G  +   R S + LV  +  VY
Sbjct: 60  AESLLAYQPTDSYGRAFLVGLVNTLYISALVIAASTLLGFGLALARRSRHPLVTGVATVY 119

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF-GMFLNNRGLSFPTLTMDTN 186
           +E  RN P +V + F Y  V   LP P    + P  G+FL+ RGL FP+L++  +
Sbjct: 120 LEAVRNTPLVVQLLFWYSLVTINLP-PARQALQPLPGVFLSVRGLFFPSLSLQGD 173


>gi|312882264|ref|ZP_07742010.1| ABC-type amino acid transport system permease component [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370108|gb|EFP97614.1| ABC-type amino acid transport system permease component [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 246

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 79/130 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IALS   +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA+R I+
Sbjct: 114 HFWAGVIALSIAESAFMAEVFRGGIQAIRRGQHEAAHSLGLGYWQTMRLVILPQALRQIL 173

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++ +LK SSL   +G +DL      ++      +EI    +  YL L ++++  
Sbjct: 174 PPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVIEYLVLILLVSQA 233

Query: 385 MNRLNAKIAL 394
           +  +  ++A+
Sbjct: 234 VRWVEKRVAI 243


>gi|26987806|ref|NP_743231.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982503|gb|AAN66695.1|AE016297_9 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|313497436|gb|ADR58802.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 248

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 77/128 (60%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S+ I L  +TAA + E VR+G+ A+P+GQ  AA A+G +  +    VLLPQA R IIPP
Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPKGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPP 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M 
Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231

Query: 387 RLNAKIAL 394
            +  K+A+
Sbjct: 232 MVEKKVAV 239



 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++G+L+G  R   N+LV+ I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 45  LLGSLLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLP 93


>gi|85704884|ref|ZP_01035985.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. 217]
 gi|85670702|gb|EAQ25562.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. 217]
          Length = 239

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 74/127 (58%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            PEF++  +AL  YTA+ +AE VR+G+ AVP G   AA A G+   +  R VLLP + R 
Sbjct: 100 QPEFVTAVVALGLYTASRVAEQVRAGIEAVPTGLKSAATAQGMRVSQVYRYVLLPISFRL 159

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PP+TS++L + KNSSLA+ +G  +L +    I   T Q+ E       IY+ +++   
Sbjct: 160 IVPPMTSEFLTVFKNSSLALTIGLLELTAQSQQIAEYTFQSFEAYTAATIIYVLIALCAT 219

Query: 383 LFMNRLN 389
           + M  L 
Sbjct: 220 IVMTVLE 226



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y   +L G   T  +A    + A ++G+LVG GR   NK+V+ +C  YVE+FRN+P 
Sbjct: 12  EPEYFGWLLSGLGWTVSVALCAWVIAMVVGSLVGVGRTLPNKVVSTVCTAYVELFRNVPL 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y +V  +LP
Sbjct: 72  LVQMFIWYFAVPEMLP 87


>gi|228940614|ref|ZP_04103180.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228973534|ref|ZP_04134118.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228980092|ref|ZP_04140408.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228779678|gb|EEM27929.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228786229|gb|EEM34224.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228819120|gb|EEM65179.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326941247|gb|AEA17143.1| cystine transport system permease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 222

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 21/222 (9%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           SFP L      T+       + SFV+GI L++     +++ +     ++  +YIS F   
Sbjct: 11  SFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKYLY-----SIARVYISFFR-- 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV +   + L+F  P           TV     +  I LS   AA+++EI+R  L 
Sbjct: 64  GTPLLVQL---FVLYFGLP-----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+ A+G A+++
Sbjct: 116 AVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEIL 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 176 AQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217


>gi|163736869|ref|ZP_02144287.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
 gi|161389473|gb|EDQ13824.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
          Length = 273

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 78/128 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    +AFI+E+ R+GL +V  GQ+EAA +LGL+     R ++ PQA+R+I+PPL + 
Sbjct: 145 IALMIAYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAIRTILPPLGND 204

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSL   +G AD+  +G        +  E   +   IYL+L+I ++L + R   
Sbjct: 205 FVALVKDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIGLSLLLRRFEK 264

Query: 391 KIALKEKK 398
            +  +E++
Sbjct: 265 HLRRREER 272


>gi|51243940|ref|YP_063824.1| glutamine transport system permease protein (GlnP) [Desulfotalea
           psychrophila LSv54]
 gi|50874977|emb|CAG34817.1| related to glutamine transport system permease protein (GlnP)
           [Desulfotalea psychrophila LSv54]
          Length = 269

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 81/127 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F S  +ALS +  A+ +EI R+G++++ RGQ EAA + GL++ +  R ++LPQA++ I+
Sbjct: 139 RFSSAILALSLFEGAYTSEIFRTGILSIDRGQHEAAASFGLSNIQRYRFIILPQAIKKIL 198

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLT+Q ++L+K+S+L   +   DL      ++ +T  + EI      IYL ++I++++ 
Sbjct: 199 PPLTNQAISLVKDSALVSTIAIYDLTMQAQMLVAETYLSFEIWFTVALIYLCINILLSIA 258

Query: 385 MNRLNAK 391
           +  ++ K
Sbjct: 259 VFLMDKK 265


>gi|257451921|ref|ZP_05617220.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R]
 gi|317058472|ref|ZP_07922957.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R]
 gi|313684148|gb|EFS20983.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R]
          Length = 224

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 85/147 (57%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQ EA  ALGL++ +
Sbjct: 78  ILANIIFVGALRETPILIVAGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQ 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + V++PQA++ I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 138 TMKFVIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLA 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +  + M ++   + + +
Sbjct: 198 VGIIYLILTTVFTILMRKVEKGLKVSD 224


>gi|268589605|ref|ZP_06123826.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Providencia rettgeri DSM 1131]
 gi|291315079|gb|EFE55532.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Providencia rettgeri DSM 1131]
          Length = 254

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 78/131 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IA++  + A+++EI R+G+ ++ +GQMEA+ ALG++  K  R V+LPQA R I+P
Sbjct: 122 FLSCVIAITLNSGAYVSEIFRAGIQSIDKGQMEASRALGMSWAKTMRKVILPQAFRRILP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    IY  L+ ++A  +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILAQLV 241

Query: 386 NRLNAKIALKE 396
             +  ++   +
Sbjct: 242 QYMERRLGRSD 252


>gi|194444936|ref|YP_002039906.1| glutamate/aspartate ABC transporter permease protein GltK
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194403599|gb|ACF63821.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 224

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y   S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|89899833|ref|YP_522304.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89344570|gb|ABD68773.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 214

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 20/204 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG  ++LF     R       + L ++YI T  I G+P LVL+ + Y           F
Sbjct: 30  ILGFCIALF-----RVSPNSVLRYLSVVYIQT--IQGIPLLVLLFIAY-----------F 71

Query: 255 NF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            F I G   SP F+++ +A S Y+AA++ EI R  +  VP+ Q EA+ +LG    +  RL
Sbjct: 72  GFSIAGFNPSP-FVTVVVAFSLYSAAYLGEIWRGCIQTVPKPQWEASGSLGFNRYQQLRL 130

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQA R   PP     + L+KN+SLA  VGF +L   G  + N T +   + L+    
Sbjct: 131 VIIPQAFRIATPPTVGFLVQLVKNTSLASTVGFIELARAGQILNNTTFKPFSVFLLVALF 190

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           Y  L   ++L   +L   + +  +
Sbjct: 191 YFGLCFPLSLLSKKLERSLNVAHR 214


>gi|318604769|emb|CBY26267.1| glutamate Aspartate transport system permease protein GltK
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 224

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 77/127 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +S   ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISFSASML 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 INYLKKR 222



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 29/46 (63%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           GT++   RLS  K ++W    YV VFR+IP ++V+ + Y  V S+L
Sbjct: 38  GTVLAVMRLSPVKAISWFATAYVNVFRSIPLVMVLLWFYLVVPSLL 83


>gi|309378707|emb|CBX22657.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 248

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|311232935|gb|ADP85789.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 314

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L+ Y  A+I+EIVR+G+ +VPRGQ +A+ + GL   +  R V+LPQA+R  +P
Sbjct: 184 FLSAVVTLAIYEGAYISEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRHAVP 243

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  Q+++++K+S++   +   +L   G  ++  T Q  EI      +YL L++  +L  
Sbjct: 244 PLAGQFISIIKDSAIVSVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCSLVA 303

Query: 386 NRLNAK 391
            RL  +
Sbjct: 304 ERLERR 309


>gi|163743971|ref|ZP_02151340.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis 2.10]
 gi|161382731|gb|EDQ07131.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis 2.10]
          Length = 273

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 78/128 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    +AFI+E+ R+GL +V  GQ+EAA +LGL+     R ++ PQA+R+I+PPL + 
Sbjct: 145 IALMIAYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAIRTILPPLGND 204

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSL   +G AD+  +G        +  E   +   IYL+L+I ++L + R   
Sbjct: 205 FVALVKDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIGLSLLLRRFEK 264

Query: 391 KIALKEKK 398
            +  +E++
Sbjct: 265 HLRRREER 272


>gi|94309637|ref|YP_582847.1| amino acid ABC transporter permease [Cupriavidus metallidurans
           CH34]
 gi|93353489|gb|ABF07578.1| ABC-type transporter, permease component: PAAT family [Cupriavidus
           metallidurans CH34]
          Length = 230

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 85/138 (61%), Gaps = 5/138 (3%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +P+F ++ +AL  +  A++AEIVR+G+  +PRGQME+A +LGL++ +A  LV+LPQA+R+
Sbjct: 92  TPQFATMLVALVVFDGAYLAEIVRAGIQGLPRGQMESARSLGLSYAQAMALVILPQALRN 151

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIY----LSL 377
           ++P L +Q ++ +K +SL   +   ++  + G I  Q   QA ++ L+    Y      L
Sbjct: 152 MLPSLVNQLVSTIKETSLGYIISLPEVSFIAGQISTQMLTQAAQVYLLLALSYFVMCFGL 211

Query: 378 SIMIALFMNRLNAKIALK 395
           +    L   RL A+ A+K
Sbjct: 212 TRCAYLLERRLAARNAVK 229



 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G   T  LA SG++ A  +G ++G  R+S  + + W   V + V R  P L
Sbjct: 15  GQYPNGPLGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTLRWPATVLIYVVRGTPLL 74

Query: 143 VVIFFLY 149
           +V+F+ Y
Sbjct: 75  MVVFWAY 81


>gi|254975774|ref|ZP_05272246.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255093161|ref|ZP_05322639.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
 gi|255314903|ref|ZP_05356486.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255517577|ref|ZP_05385253.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255650688|ref|ZP_05397590.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|260683775|ref|YP_003215060.1| putative amino-acid ABC transporter permease [Clostridium difficile
           CD196]
 gi|260687435|ref|YP_003218569.1| putative amino-acid ABC transporter permease [Clostridium difficile
           R20291]
 gi|306520613|ref|ZP_07406960.1| putative amino-acid ABC transporter, permease protein [Clostridium
           difficile QCD-32g58]
 gi|260209938|emb|CBA63911.1| probable amino-acid ABC transporter, permease protein [Clostridium
           difficile CD196]
 gi|260213452|emb|CBE05129.1| probable amino-acid ABC transporter, permease protein [Clostridium
           difficile R20291]
          Length = 222

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 113/204 (55%), Gaps = 15/204 (7%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F  S +LG++L+ F    S+     T      +Y+S F   G P L+ I   +  +F  P
Sbjct: 31  FFLSILLGVILAFFTQTKSKVLQYITR-----VYVSFFR--GTPLLIQI---FFFYFGFP 80

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++  F+F+     SP ++++ I L   ++A++ EI+R+ + +V +GQ EA  A GL+  +
Sbjct: 81  MI--FSFM--KDCSP-YLAIVICLGVNSSAYMTEIIRASIESVDKGQQEACYAFGLSKYQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   ++LPQA  S +PP+ S  L+++K SSL + +G  DL+ V       + +  EI +I
Sbjct: 136 SMVKIILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMI 195

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
            + IY ++SI+++   +++  +I 
Sbjct: 196 TILIYWAVSIILSNIQSKVEKRIG 219


>gi|317153798|ref|YP_004121846.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316944049|gb|ADU63100.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 238

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 5/138 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +       +T A+I EIVR+G++A+P GQMEAA   GL+  +A R V+LPQA+R++
Sbjct: 101 PAFSTTLACFIIFTGAYIGEIVRAGVLALPNGQMEAARGSGLSRYQAMRYVILPQALRNM 160

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIM 380
           IP   +Q+++L K++SLA  +G  +L   G  + N+  + I    IW+ I   Y  +  +
Sbjct: 161 IPSFVNQFVSLTKDTSLASVIGVNELTRTGVQVDNR--EMIASFEIWITIAALYFCICYV 218

Query: 381 IALFMNRLNAKIALKEKK 398
           +     R+ A ++  + +
Sbjct: 219 LTSISRRMEAHLSRYQAR 236


>gi|157146736|ref|YP_001454055.1| hypothetical protein CKO_02510 [Citrobacter koseri ATCC BAA-895]
 gi|157083941|gb|ABV13619.1| hypothetical protein CKO_02510 [Citrobacter koseri ATCC BAA-895]
          Length = 224

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 83/134 (61%), Gaps = 4/134 (2%)

Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           +SP+     +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LP
Sbjct: 89  ISPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILP 148

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R+++P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +
Sbjct: 149 QAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMILFAGAVYFVI 208

Query: 378 SIMIALFMNRLNAK 391
           S+  +L ++ L  +
Sbjct: 209 SLSASLLVSYLKKR 222



 Score = 43.1 bits (100), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVVIGILWGTILAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       + VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGLLQDVLGISPKTDIRLISAMVAFSMF 107


>gi|312883097|ref|ZP_07742828.1| ABC transporter ATP-binding/permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309369257|gb|EFP96778.1| ABC transporter ATP-binding/permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 264

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 119/236 (50%), Gaps = 19/236 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD       G +     +   T+T+  +    +F+ ++G+V +L   RLS     + G+
Sbjct: 42  VPDFIAFYEDGQWWPAELIDGLTVTIKISMISLLFTLLIGMVTALL--RLS---SSRVGR 96

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            + LLY+   LI   P LV I L Y +    P++G             F +  +AL+ + 
Sbjct: 97  GIALLYVE--LIRNTPLLVQIYLLYFVF--GPIIGL----------DRFTTAIVALALFQ 142

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+ R+GL ++P+GQ EAA +LGL        V+LPQ ++  +PPL ++ ++L+KN
Sbjct: 143 GAYTAEVFRAGLNSIPKGQYEAAKSLGLNRFFTFYDVILPQVIQRTLPPLANEVVSLVKN 202

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           SS+   +   DL +    I+++T    EI      IYL L++ ++   + L  K+ 
Sbjct: 203 SSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLGLTLTLSAVSSILETKLG 258


>gi|315281521|ref|ZP_07870132.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria marthii FSL S4-120]
 gi|313614833|gb|EFR88366.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria marthii FSL S4-120]
          Length = 480

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+  + F  FG+P     AL +++                   P F++  IALS  
Sbjct: 325 RGTPLIVQAFFFYFGIPA----ALDFRM-------------------PVFLAGVIALSLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V +GQMEAA +LGL ++KA   V+LPQA+R +IP   +Q++  LK
Sbjct: 362 AGAYMVEIVRGGIQSVDKGQMEAARSLGLPYKKAMMKVVLPQAIRMMIPSFINQFVITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +T ++    LI   +YL +  ++    +RL  ++
Sbjct: 422 DTSIMSAIGLVELTQSGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRL 477



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA   +I A IIG   G  ++S NK++  I  VYV++FR  P +V  FF
Sbjct: 276 ALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNNKILRGIATVYVDIFRGTPLIVQAFF 335

Query: 148 LY 149
            Y
Sbjct: 336 FY 337


>gi|319744752|gb|EFV97094.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 231

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 63/88 (71%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+P
Sbjct: 100 FFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILP 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           P+T+Q +NL+KN+S    +  AD++ V 
Sbjct: 160 PMTNQVVNLIKNTSTVAIISGADIMFVA 187


>gi|52784239|ref|YP_090068.1| YckJ [Bacillus licheniformis ATCC 14580]
 gi|163119223|ref|YP_077658.2| ABC transporter permease YckJ [Bacillus licheniformis ATCC 14580]
 gi|319648833|ref|ZP_08003044.1| YckJ protein [Bacillus sp. BT1B_CT2]
 gi|52346741|gb|AAU39375.1| YckJ [Bacillus licheniformis ATCC 14580]
 gi|145902729|gb|AAU22020.2| ABC transporter permease protein YckJ [Bacillus licheniformis ATCC
           14580]
 gi|317389252|gb|EFV70068.1| YckJ protein [Bacillus sp. BT1B_CT2]
          Length = 234

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 116/205 (56%), Gaps = 19/205 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ G++++L  T L+R    +  +A+  +Y+S   I G P LV + + + L     V
Sbjct: 40  ILSFIFGMIIALI-TALARMSKSRILRAVFGIYVSA--IRGTPLLVQLFIIFYLFPAFQV 96

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                     T+ P F S  IA S    A+ +EI+R+ +++VP+GQ EAA ++G+T + A
Sbjct: 97  ----------TIDP-FPSAIIAFSLNVGAYASEIIRASILSVPKGQWEAAYSIGMTQKTA 145

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V+LPQA+R  IPPL++ +++L+K++SLA  +  A+L      I    G   +I++I+
Sbjct: 146 LTRVILPQAVRVSIPPLSNTFISLVKDTSLASQILVAELFRKAQEI--GAGNLDQILIIY 203

Query: 371 M---FIYLSLSIMIALFMNRLNAKI 392
           M   FIY  +  ++AL   ++  ++
Sbjct: 204 MEAAFIYWIICFVLALVQQQIERRL 228


>gi|323489528|ref|ZP_08094755.1| putative ABC transporter (permease) [Planococcus donghaensis
           MPA1U2]
 gi|323396659|gb|EGA89478.1| putative ABC transporter (permease) [Planococcus donghaensis
           MPA1U2]
          Length = 225

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 115/206 (55%), Gaps = 16/206 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S ++G+++  F + L+R    K  +    LYIS   + G+P LV++ L   L+F  
Sbjct: 32  ISVVSMIVGVIIGFFLS-LARTSQLKILQFPARLYIS--FMRGVPILVILFL---LYFAL 85

Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           PV+G +F  +  +          I  S  +AA+IAE+ RS L +V +GQ E++ ALGLT+
Sbjct: 86  PVVGIEFTAVQAAL---------IGFSINSAAYIAEVFRSSLASVDKGQWESSKALGLTY 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++ R ++LPQ++R  +PPL++ YL+L+K SSLA  +   ++      +  +    + ++
Sbjct: 137 WQSMRRIILPQSIRIALPPLSNVYLDLIKASSLAAMITVPEIFQKARIVGAREYDLLTML 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++   IY ++  ++ +  N L  K A
Sbjct: 197 ILVALIYWAICSIMTILQNYLEKKYA 222


>gi|257467277|ref|ZP_05631588.1| amino acid ABC transporter permease [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315918406|ref|ZP_07914646.1| amino acid transport system permease [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313692281|gb|EFS29116.1| amino acid transport system permease [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 224

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 85/147 (57%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQ EA  ALGL++ +
Sbjct: 78  ILANIIFVGALRETPILIVAGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQ 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + V++PQA++ I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 138 TMKFVIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLA 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +  + M ++   + + +
Sbjct: 198 VGIIYLILTTIFTVLMRKVEKGLKVSD 224


>gi|148379978|ref|YP_001254519.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933019|ref|YP_001384277.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153941251|ref|YP_001391341.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|168179724|ref|ZP_02614388.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|148289462|emb|CAL83559.1| probable amino acid ABC transporter, permease protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152929063|gb|ABS34563.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152937147|gb|ABS42645.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|182669187|gb|EDT81163.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|295319370|gb|ADF99747.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 228

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 103/182 (56%), Gaps = 14/182 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L     + +GLPT   I +K+    + P+LG  NF       P+F +  +ALS  
Sbjct: 61  RGTPVLVQLYIIYYGLPT---IGIKFP---EVPILGS-NF-------PDFFAGILALSIN 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AEI+R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++ ++K
Sbjct: 107 SGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            SS+   +G  +L+    T+     +  E +L+   +Y  L+  ++  +     ++ + +
Sbjct: 167 ESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSD 226

Query: 397 KK 398
           + 
Sbjct: 227 RN 228


>gi|294101423|ref|YP_003553281.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616403|gb|ADE56557.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 217

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 13/162 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L   YI  ++I G P L+ + L Y   F  P LG  N        P F +  I LS  
Sbjct: 52  KGLAAAYI--YVIRGTPLLIQLFLIY---FGLPSLG-INL-------PAFTAGIIGLSIN 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +A ++ EIVR G+ AVP+GQ EAA  LGL++    R ++LPQA+R+++P L ++++ L+K
Sbjct: 99  SAGYVGEIVRGGIEAVPKGQWEAAKVLGLSYLGTMRHIILPQAIRNMLPALGNEFVTLIK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            SSL   +  A+L  VG  + + T  + E  ++   IYL L+
Sbjct: 159 ESSLLSTLAIAELTMVGQQVRSVTYASFETFIMVGLIYLCLT 200


>gi|261365769|ref|ZP_05978652.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria mucosa ATCC 25996]
 gi|288565672|gb|EFC87232.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria mucosa ATCC 25996]
          Length = 248

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ RGQMEAA +LGL++ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDRGQMEAARSLGLSYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQSTISGRYSVYEEPLYTVALIYLMMTTFLGWVFLRLEN 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|123443208|ref|YP_001007182.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|332160866|ref|YP_004297443.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|122090169|emb|CAL13032.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|325665096|gb|ADZ41740.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863398|emb|CBX73520.1| glutamate/aspartate transport system permease protein gltK
           [Yersinia enterocolitica W22703]
          Length = 224

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 77/127 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +S   ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISFSASML 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 VNYLKKR 222



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 29/46 (63%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           GT++   RLS  K ++W    YV VFR+IP ++V+ + Y  V S+L
Sbjct: 38  GTVLAVMRLSPVKAISWFATAYVNVFRSIPLVMVLLWFYLVVPSLL 83


>gi|326804125|ref|YP_004321943.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650324|gb|AEA00507.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 505

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 23/207 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF   LG +L++   RL+ +   K    + + Y+    I G P ++             V
Sbjct: 318 VFGLTLGAILAVM--RLTEN---KILSGIAMAYVE--FIRGTPLMI------------QV 358

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  F  IGG    P  +S  IA+S  + A+I+EI+R G+ AV + Q EAA +LGL     
Sbjct: 359 LFMFLGIGGLFNVPALLSALIAVSLNSGAYISEIIRGGIQAVDKEQTEAARSLGLDRLTT 418

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + V+ PQ++RSI P L ++++ L+K SS+   +G A+L      + + T Q I  +LI 
Sbjct: 419 LKKVIFPQSLRSIWPALGNEFVTLIKESSIVSTIGIAELTFQTRAVTSITYQGIIPLLIS 478

Query: 371 MFIYLSLSIMIALFMNR----LNAKIA 393
           M IY  L+  +  F+NR    +NAK A
Sbjct: 479 MVIYFILTFTLTKFLNRWEKQMNAKYA 505


>gi|310640366|ref|YP_003945124.1| glutamine transport system permease protein [Paenibacillus polymyxa
           SC2]
 gi|309245316|gb|ADO54883.1| Probable glutamine transport system permease protein [Paenibacillus
           polymyxa SC2]
          Length = 482

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 17/200 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F+LG+V            H K  + +  +++  F   G+P   LI L + ++F  P   
Sbjct: 297 AFLLGLVFGFMKVS-----HNKVFRGIATVFVDVFR--GIP---LIVLAFFIYFGIPQAL 346

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F         P F++  + LS    A++ EI+R G+ ++  GQMEAA +LGL +R A  
Sbjct: 347 DFKM-------PLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQMEAARSLGLPYRTAML 399

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA++ +IP   +Q +  LK++S+   +G  +L   G  II +T Q+ +I L+   
Sbjct: 400 KIILPQAVKIMIPSFINQLVITLKDTSILSVIGLVELTQSGKIIIARTFQSFDIWLVVAV 459

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           +YL +  ++    NRL  ++
Sbjct: 460 MYLIVITVLTKISNRLEGRV 479



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 24/173 (13%)

Query: 71  EIDQGIVPYTSD-----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           E  +G+ P         S+   A++ G  NT       ++ A ++G + G  ++S NK+ 
Sbjct: 256 ESGKGVAPVERSRWELISASLPALIKGMGNTLLYTLVSLLVAFLLGLVFGFMKVSHNKVF 315

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             I  V+V+VFR IP +V+ FF+Y        IP     L F M L         LT+  
Sbjct: 316 RGIATVFVDVFRGIPLIVLAFFIY------FGIPQ---ALDFKMPL----FVAAVLTLSL 362

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           NA  +V   + G + S+   ++      +  ++L L Y +  L   LP  V I
Sbjct: 363 NAGAYVTEIIRGGIQSIDPGQM------EAARSLGLPYRTAMLKIILPQAVKI 409


>gi|77405945|ref|ZP_00783025.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77175456|gb|EAO78245.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 133

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 63/85 (74%), Gaps = 3/85 (3%)

Query: 272 ALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           A+SC   Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+PP+T
Sbjct: 5   AVSCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMT 64

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVG 353
           +Q +NL+KN+S    +  AD++ V 
Sbjct: 65  NQVVNLIKNTSTVAIISGADIMFVA 89


>gi|307730960|ref|YP_003908184.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307585495|gb|ADN58893.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 225

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 77/126 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A S + AA+ +EI+R+G+ AVPRGQ+ AA ALG+ + +A RL++LPQA R+++P L
Sbjct: 99  SAMVAFSLFEAAYYSEIIRAGIQAVPRGQVNAAYALGMGYGQAMRLIVLPQAFRAMVPLL 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   +  AD       I ++ G  +E++L     Y  + ++ +  +  
Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVIASSLVKG 218

Query: 388 LNAKIA 393
           L  K+A
Sbjct: 219 LQKKVA 224


>gi|241113706|ref|YP_002973541.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861914|gb|ACS59580.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 276

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 10/214 (4%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   VF  VLG +L+L AT           K +   ++  F   G+P +V I  
Sbjct: 49  LTLELTAGAMVFGIVLGCLLALMATS-----QNPVLKVIAAGFVWWFR--GVPLIVQIFF 101

Query: 241 KYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +    P   +G F       V+P     ++AL  + AA ++EI+R GL+AV RGQ E
Sbjct: 102 WFNIALFIPQVGMGSFTISINDLVTPALAG-FLALGLHEAANMSEIIRGGLVAVDRGQRE 160

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL   +    V++PQA R I+PP  +Q + +LK +++   +G  DL++    I  
Sbjct: 161 AATALGLKKTQTFLTVIMPQATRIIVPPTGNQAIGMLKATAIVSVIGMQDLLTQAQAIYA 220

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +    IE++ +    YL+++ + ++  + L  ++
Sbjct: 221 RNFLVIELLFVASIWYLAITSVASIGQHYLEKRL 254


>gi|213970377|ref|ZP_03398506.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301381160|ref|ZP_07229578.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302063126|ref|ZP_07254667.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132573|ref|ZP_07258563.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213924848|gb|EEB58414.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 219

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL   +    VLLPQA++ +
Sbjct: 88  PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRL 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PP+ + Y  L+K SSLAV +G  D+  VG  II +T    E +LI+ F++L
Sbjct: 148 TPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERT---YESVLIYGFLFL 196


>gi|28870259|ref|NP_792878.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|28853506|gb|AAO56573.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 219

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL   +    VLLPQA++ +
Sbjct: 88  PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRL 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PP+ + Y  L+K SSLAV +G  D+  VG  II +T    E +LI+ F++L
Sbjct: 148 TPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERT---YESVLIYGFLFL 196


>gi|330973077|gb|EGH73143.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 254

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 31  FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 90

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 91  PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 150

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 151 RVIEKKVAV 159


>gi|302336895|ref|YP_003802101.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634080|gb|ADK79507.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 225

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 112/205 (54%), Gaps = 33/205 (16%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKP 249
           +LG +L+L   RLS++   K    +  LY+   +I G P LV + + Y      L  DK 
Sbjct: 43  ILGTLLALM--RLSKN---KVANIISKLYVE--IIRGTPVLVQLLIIYFVIFRALDVDKT 95

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                            M+  +A    + A++AEI+R+G+ AV +GQMEAA +LGL HR 
Sbjct: 96  -----------------MASSLAFGINSGAYVAEIIRAGIQAVDKGQMEAARSLGLPHRL 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----E 365
           A + ++LPQA+++I+P L ++++ LLK +S+   +G  DL+  G  I + T +A      
Sbjct: 139 AMKEIILPQAIKNILPALGNEFIVLLKETSIIGFIGGNDLMRAGNKIRSITYEATVPLFA 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390
             +I++ I LSLS ++  +  RL++
Sbjct: 199 TAVIYLIITLSLSHLLNRYERRLHS 223



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +    I+GTL+   RLS NK+   I ++YVE+ R  P LV +  +
Sbjct: 23  LLNGLKVTIVVTLFAITAGVILGTLLALMRLSKNKVANIISKLYVEIIRGTPVLVQLLII 82

Query: 149 Y 149
           Y
Sbjct: 83  Y 83


>gi|227114069|ref|ZP_03827725.1| amino acid ABC transporter [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 254

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ +  R V+LPQA R ++P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISIVYWVITFLLSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMETRFGKSDSR 254


>gi|77413498|ref|ZP_00789688.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77160442|gb|EAO71563.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
          Length = 207

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 72/114 (63%), Gaps = 8/114 (7%)

Query: 247 DKPVLGQFNFI--------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           + P+L Q  F+         G  +   F +  + +  Y  A+I+E++RSG+ AVP+GQ E
Sbjct: 49  NTPLLVQMVFVYYGLAIISNGHVMISAFFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTE 108

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           AA+A G T  +  +L++LPQA+R+I+PP+T+Q +NL+KN+S    +  AD++ V
Sbjct: 109 AALAQGFTANQTMQLIILPQAVRTILPPMTNQVVNLIKNTSTVAIISGADIMFV 162


>gi|325272374|ref|ZP_08138772.1| amino acid ABC transporter permease [Pseudomonas sp. TJI-51]
 gi|324102499|gb|EGB99947.1| amino acid ABC transporter permease [Pseudomonas sp. TJI-51]
          Length = 222

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 30/213 (14%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHF 246
           F  VLG  L+L   RLS        K LPL     +Y+S F   G P LV +   + ++F
Sbjct: 33  FGLVLGFALALM--RLS--------KVLPLNWLARIYVSFFR--GTPLLVQL---FVIYF 77

Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P +G + + I  S          I LS   AA+I EI+R+ + ++ RGQ EAA ++G+
Sbjct: 78  GMPQIGIELDPIPAS---------LIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGM 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +A R  +LPQA+R+ +PPL + +++L+K+++LA  +   +L      I  +T +   
Sbjct: 129 TRVQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFT 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +    IY  L  ++A F NR+ A++   +++
Sbjct: 189 MYVAVAVIYWVLCSILAHFQNRMEARVNQHDQE 221


>gi|322832887|ref|YP_004212914.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168088|gb|ADW73787.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 290

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 99/167 (59%), Gaps = 4/167 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           T++  G P ++ + L + L    PV+   G F+      ++P F +  + LS    A+ +
Sbjct: 112 TWIFRGTPLILQLLLWFNLALIFPVIAIPGVFSIQTVDIMTP-FTAALLGLSINQGAYTS 170

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VR+GLI+V  GQ EAA ++G+T   A R ++LPQAMR IIPP+ +++++++K +SLA 
Sbjct: 171 EVVRAGLISVDLGQYEAAKSIGMTRLHALRRIILPQAMRVIIPPIGNEFISMVKTTSLAS 230

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + +++++    TI     + +E++ +    YL +  +++L  NRL 
Sbjct: 231 MIQYSEVLYNAQTIYFANARVMELLFVAGIWYLVVVTVLSLGQNRLE 277


>gi|289549953|ref|YP_003470857.1| amino acid ABC transporter, permease protein [Staphylococcus
           lugdunensis HKU09-01]
 gi|289179485|gb|ADC86730.1| amino acid ABC transporter, permease protein [Staphylococcus
           lugdunensis HKU09-01]
          Length = 239

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 120/209 (57%), Gaps = 14/209 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++L+LF T L R    +  +A+  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITIVTFVLGLILALF-TALMRISTSRILRAIARIYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           P LG+   I G      T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++
Sbjct: 88  PELGRL--ITGDADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSI 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+R+  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + 
Sbjct: 145 GMTYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEY 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I ++   +Y  +  +I++      +KI
Sbjct: 205 FTIYILVAIMYWVVCFIISVLQGLYESKI 233


>gi|322806285|emb|CBZ03853.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum H04402 065]
          Length = 162

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 98/169 (57%), Gaps = 14/169 (8%)

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           +GLPT   I +K+    + P+LG  NF       P+F +  +ALS  + A++AEI+R+G+
Sbjct: 8   YGLPT---IGIKFP---EVPILGS-NF-------PDFFAGILALSINSGAYVAEIIRAGI 53

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV +GQMEAA +LG++   A R V++PQA ++I+P L ++++ ++K SS+   +G  +L
Sbjct: 54  QAVDKGQMEAARSLGMSESMAMRNVIIPQAFKNILPALGNEFITIIKESSIVSIIGIHEL 113

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    T+     +  E +L+   +Y  L+  ++  +     ++ + ++ 
Sbjct: 114 MYNADTVRGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSDRN 162


>gi|104779493|ref|YP_605991.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95108480|emb|CAK13174.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 222

 Score = 87.0 bits (214), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 30/213 (14%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHF 246
           F  VLG  L+L   RLS        K LPL     +Y+S F   G P LV +   + ++F
Sbjct: 33  FGLVLGFALALM--RLS--------KILPLDWLARIYVSFFR--GTPLLVQL---FVIYF 77

Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P +G + + I  S          I LS   AA+I EI+R+ + ++ RGQ EAA ++G+
Sbjct: 78  GLPQIGIELDPIPAS---------LIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGM 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +A R  +LPQA+R+ +PPL + +++L+K+++LA  +   +L      I  +T +   
Sbjct: 129 TRTQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFT 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + L    +Y  L  ++A F NR+ A++   +++
Sbjct: 189 MYLAVAVVYWILCSILAHFQNRMEARVNQHDQE 221


>gi|331016474|gb|EGH96530.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 219

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL   +    VLLPQA++ +
Sbjct: 88  PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRL 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PP+ + Y  L+K SSLAV +G  D+  VG  II +T    E +LI+ F++L
Sbjct: 148 TPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERT---YESVLIYGFLFL 196


>gi|229552146|ref|ZP_04440871.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258539560|ref|YP_003174059.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|229314448|gb|EEN80421.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257151236|emb|CAR90208.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 485

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 4/130 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  IA+S  +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+    V+LPQA+++I
Sbjct: 353 PALVAGLIAVSLNSAAYVAEIIRSGIDSIPIGQTEAARSLGLSERQTMTSVVLPQAIKNI 412

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379
            P L +++++L+K SS+   +G  DL+     +   T + ++ IL+ M +Y      LS 
Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSK 472

Query: 380 MIALFMNRLN 389
           +++ F  ++N
Sbjct: 473 LLSHFERKMN 482


>gi|261341267|ref|ZP_05969125.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316571|gb|EFC55509.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 224

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGGVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 40.0 bits (92), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 10/78 (12%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSV 155
            +I   + GTL+   RLS+ K +AW    YV VFR+IP ++V+ + Y       ++VL +
Sbjct: 30  AIIVGIVWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGL 89

Query: 156 LPIPD---HSIVLPFGMF 170
            P  D    S ++ F MF
Sbjct: 90  SPKTDIRLISAMVAFSMF 107


>gi|222094396|ref|YP_002528455.1| ABC transporter , permease; glutamine ABC transporter , permease
           [Bacillus cereus Q1]
 gi|229194960|ref|ZP_04321741.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1293]
 gi|221238453|gb|ACM11163.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus Q1]
 gi|228588528|gb|EEK46565.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1293]
          Length = 214

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 45/215 (20%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I FL K +L  L +   +IVL F        +    + +    KI VFS +LG+++ +  
Sbjct: 12  ILFLLKGLLITLEVALVAIVLSF--------IIGSVIGIVRYTKIPVFSQILGVIVEVI- 62

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
                       + LPLL I  F  F LP      LK ++                    
Sbjct: 63  ------------RNLPLLLIIFFTYFALPEA---GLKLEI-------------------- 87

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++
Sbjct: 88  -ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMV 146

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PPL SQ+++LLK+++LAV +   +L+     I  Q
Sbjct: 147 PPLVSQFISLLKDTALAVVISLPELMHNAQIISGQ 181



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   + + I  V VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGVIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|116516598|ref|YP_816212.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|149021689|ref|ZP_01835720.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|116077174|gb|ABJ54894.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|147930150|gb|EDK81136.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|301793968|emb|CBW36365.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae INV104]
          Length = 227

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 117/210 (55%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+ F  R          K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++EIVR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 83  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSEIVRAGINAVPKGQLEAAYSLGIRPK 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 138 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227


>gi|116250760|ref|YP_766598.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255408|emb|CAK06483.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 290

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 10/219 (4%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   +F  VLG +L+L AT           K +   ++  F   G+P +V I  
Sbjct: 69  LTLELTAGAMMFGIVLGCLLALMATS-----QNPVLKVIAAGFVWWFR--GVPLIVQIFF 121

Query: 241 KYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +    P   +G F       V+P     ++AL  + AA ++EI+R GLIAV RGQ E
Sbjct: 122 WFNIALFIPQVGMGSFTISINDLVTPALAG-FLALGLHEAANMSEIIRGGLIAVDRGQRE 180

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL   +    V++PQA R I+PP  +Q + +LK S++   +G  DL++    I  
Sbjct: 181 AATALGLKKTQTFFTVIMPQATRIIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYA 240

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    IE++ +    YL+++ + ++  + L   +  K +
Sbjct: 241 RNFLVIELLFVASIWYLAITSVASIGQHYLEKSLVPKGR 279


>gi|330501773|ref|YP_004378642.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328916059|gb|AEB56890.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 245

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L CY AA +AE+VR+GL ++ RGQ  A +A+GLT  +  R VLLP A R ++P
Sbjct: 108 FYTAVICLGCYHAARMAEVVRAGLESLSRGQRMAGLAMGLTLVQTYRYVLLPMAYRIVVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +TS++L+  KN+S+A+A+G  +L      +   + Q  E       +YL L+++I   M
Sbjct: 168 AITSEFLSCTKNTSVALAIGLMELTGSARAMQENSFQTFEAFTAATTLYLVLNLIIVFAM 227

Query: 386 NRLNAKIAL 394
             +  K A+
Sbjct: 228 RAVERKAAV 236


>gi|320325613|gb|EFW81675.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
          Length = 248

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L  +TAA + E VR+G+  +P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEVLPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M
Sbjct: 171 PLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  V  +LP
Sbjct: 78  LVQLFIWYFLVPDLLP 93


>gi|306829197|ref|ZP_07462387.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus mitis ATCC 6249]
 gi|304428283|gb|EFM31373.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus mitis ATCC 6249]
          Length = 227

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 117/213 (54%), Gaps = 21/213 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFD 247
           F  +LG++L+ FA R          +  PL++ +   ++   G P +V I + + L H D
Sbjct: 30  FGTILGVLLA-FAQR---------SRFKPLVWFANVYVWIFRGTPMMVQIMIAFALMHID 79

Query: 248 KPVLGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            P + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+
Sbjct: 80  APTI-QVGILGVDLSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGI 134

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   + 
Sbjct: 135 RPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVATTTYLPLT 194

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L   F YL ++ ++ + +      I   +KK
Sbjct: 195 PLLFAAFYYLIMTSILTVALKAFENYIGQGDKK 227


>gi|66047137|ref|YP_236978.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|71736860|ref|YP_276041.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257486607|ref|ZP_05640648.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289624940|ref|ZP_06457894.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289650483|ref|ZP_06481826.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|289676729|ref|ZP_06497619.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
 gi|298488718|ref|ZP_07006747.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|302185659|ref|ZP_07262332.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
 gi|63257844|gb|AAY38940.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|71557413|gb|AAZ36624.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298156791|gb|EFH97882.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320325612|gb|EFW81674.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327104|gb|EFW83118.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330867230|gb|EGH01939.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330889549|gb|EGH22210.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330937578|gb|EGH41517.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330950014|gb|EGH50274.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
 gi|330989513|gb|EGH87616.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331010090|gb|EGH90146.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 221

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 23/220 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T+   A   V   VLG +L+L     ++      G      +++PLL + T+    +P 
Sbjct: 19  MTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                L++    D P+               F S  +A   + AA+  EIVR+G+ ++ +
Sbjct: 78  ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   
Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 182 SSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV 221



 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 40/65 (61%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   ++GTL+   RLS+NKL+A +   YV  FR+IP L+VI + Y +
Sbjct: 16  GMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75

Query: 152 VLSVL 156
           V  VL
Sbjct: 76  VPFVL 80


>gi|15966713|ref|NP_387066.1| putative amino-acid transport system permease ABC transporter
           protein [Sinorhizobium meliloti 1021]
 gi|307300252|ref|ZP_07580032.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15075985|emb|CAC47539.1| Putative DL-2-aminoadipic acid ABC transporter, permease component
           [Sinorhizobium meliloti 1021]
 gi|306904418|gb|EFN35002.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 323

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI R+G+ ++PRGQ E A ALGL+  +   LV+LPQAMR IIPP  +Q
Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPRGQTEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQ 255

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL   VG  +L+ +  T      + IE+++    IY  LSI +    +R+ A
Sbjct: 256 FIAMLKDSSLISVVGVWELMYLARTQGQTEFRHIEMLITASMIYWILSIGLEYMQSRVEA 315

Query: 391 K 391
           +
Sbjct: 316 R 316


>gi|290957468|ref|YP_003488650.1| binding-protein-dependent transporter [Streptomyces scabiei 87.22]
 gi|260646994|emb|CBG70093.1| putative binding-protein-dependent transporter [Streptomyces
           scabiei 87.22]
          Length = 313

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 3/117 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI R+GL++V  GQ EA+ ALG++H +  R +++PQAMR I+PP  ++ +N+LK 
Sbjct: 168 AAYMAEICRAGLLSVDEGQTEASHALGMSHARTLRRIVIPQAMRVIVPPTGNEVINMLKT 227

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           +SL   V F DL+     I   +G  +E++ +   W  +  S+  +   ++ R  AK
Sbjct: 228 TSLVSTVQFVDLLKSAQDIGQSSGATVELLFLAAAWYLVLTSIFSVGQYYLERHYAK 284


>gi|77408363|ref|ZP_00785104.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77173044|gb|EAO76172.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 231

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 62/85 (72%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+P
Sbjct: 100 FFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAIRTILP 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
           P+T+Q +NL+KN+S    +  AD++
Sbjct: 160 PMTNQVVNLIKNTSTVAIISGADIM 184


>gi|283833318|ref|ZP_06353059.1| transport and binding protein [Citrobacter youngae ATCC 29220]
 gi|291070956|gb|EFE09065.1| transport and binding protein [Citrobacter youngae ATCC 29220]
          Length = 261

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 74/132 (56%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  +T+AF+ E V SGL AV  GQ EAA+A G +     R +LLPQ + 
Sbjct: 109 LTPEFLCSAWGLGVFTSAFLIEEVSSGLQAVSGGQREAAVAQGFSAWAILRHILLPQGLA 168

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL   I++
Sbjct: 169 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLLTGIVL 228

Query: 382 ALFMNRLNAKIA 393
            + + RL  K A
Sbjct: 229 DILLTRLGPKPA 240



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ GF+ T W+  +G++ AT+   L+ + RL+ N+    +  V+V VFRN P LV + F 
Sbjct: 18  IISGFLTTLWVTLAGVVLATLFTILLLSLRLTGNRFAKAVVGVWVSVFRNTPLLVQLMFW 77

Query: 149 YKSVLSVLP 157
           Y +  + LP
Sbjct: 78  YFAAWNWLP 86


>gi|261377587|ref|ZP_05982160.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria cinerea ATCC 14685]
 gi|269146335|gb|EEZ72753.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria cinerea ATCC 14685]
          Length = 248

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALVANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEN 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|153938371|ref|YP_001390528.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|170756986|ref|YP_001780803.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|152934267|gb|ABS39765.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|169122198|gb|ACA46034.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
 gi|295318609|gb|ADF98986.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 222

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 100/176 (56%), Gaps = 15/176 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L +  +T+       + + + G++L++      R +  K   ++  +YIS F   G P L
Sbjct: 17  LKYAHITLSIAILSMIIAVLFGVILAVI-----RMYKVKVLHSISEIYISFFR--GTPIL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y         G    I      P +M++ IALS   +A++AEI+R  ++++ +G
Sbjct: 70  IQLFLFY--------YGLPQIIPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKG 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QMEA+++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG A+++S
Sbjct: 122 QMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILS 177


>gi|149926671|ref|ZP_01914931.1| ABC amino acid transporter, inner membrane subunit [Limnobacter sp.
           MED105]
 gi|149824600|gb|EDM83816.1| ABC amino acid transporter, inner membrane subunit [Limnobacter sp.
           MED105]
          Length = 246

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 82/134 (61%), Gaps = 7/134 (5%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F++  + L  +TA+ +AE V+SG++++ RGQ  A  ALGLT  +  R VLLP A R I+
Sbjct: 109 QFLASVVCLGLFTASRVAEQVKSGILSLSRGQRAAGYALGLTEGQTYRFVLLPMAYRIIV 168

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP+TS+ +NL+KNSS+A+ +G  +L         +T +  E+   +   Y++ +++  + 
Sbjct: 169 PPMTSEAMNLIKNSSVALTIGLTELTF-------RTREMGEVTFAFFEAYIAATVLYVIV 221

Query: 385 MNRLNAKIALKEKK 398
              +N  +AL E++
Sbjct: 222 AMSVNRVMALVERR 235



 Score = 39.7 bits (91), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 37/50 (74%), Gaps = 2/50 (4%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           A +G+I  T+ G+L+G  R +++K +A++   YVE+FRNI PL+V FFL+
Sbjct: 38  AVAGVIAFTV-GSLMGVLRTASSKPLAFLGNAYVELFRNI-PLIVQFFLW 85


>gi|104780400|ref|YP_606898.1| glutamate/aspartate ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95109387|emb|CAK14087.1| glutamate/aspartate ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 248

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 76/128 (59%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S+ I L  +TAA + E VR+G+ A+PRGQ  A  A+G +  +    VLLPQA R IIPP
Sbjct: 112 ISVVICLGLFTAARVCEQVRTGIQALPRGQESAGRAMGFSLPQIYMNVLLPQAYRIIIPP 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + L M 
Sbjct: 172 LTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMR 231

Query: 387 RLNAKIAL 394
            +  K+A+
Sbjct: 232 MVEKKVAV 239



 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++G+L+G  R   N+LV+ I   YVE+FRN+P LV +F  Y  V  +LP
Sbjct: 45  LLGSLLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLP 93


>gi|116629207|ref|YP_814379.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri ATCC 33323]
 gi|116094789|gb|ABJ59941.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus gasseri ATCC 33323]
          Length = 501

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+   + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++
Sbjct: 373 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 432

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L+     +   T + +  + I M IY  ++  +   +N    
Sbjct: 433 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 492

Query: 391 KI 392
           ++
Sbjct: 493 RM 494


>gi|163854809|ref|YP_001629107.1| putative amino acid ABC transporter permease protein [Bordetella
           petrii DSM 12804]
 gi|163258537|emb|CAP40836.1| putative amino acid ABC transporter permease protein [Bordetella
           petrii]
          Length = 366

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 20/222 (9%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TL + T    F F F  G++L+L      R       KAL ++YI   LI G+P + L  
Sbjct: 162 TLILSTFGIAFAFPF--GVLLAL-----GRKSKMPAIKALCVVYIE--LIRGVPLISL-- 210

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               L     +L  F  +G S    + +   IA+  + AA+IAE VR GL A+P+GQ E 
Sbjct: 211 ----LFMSSVMLPLFLPVGFSI--DKLLRAQIAIIMFAAAYIAETVRGGLQAIPKGQYEG 264

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV---SVGGTI 356
           A +LGL + +  R ++LPQA+R +IPPL S ++ L K++SL V +G  DL        + 
Sbjct: 265 ADSLGLNYWQQMRKIILPQALRIVIPPLVSIFIALFKDTSLVVIIGIFDLTLAAKAALSD 324

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               G  +E  +    IY      ++ +  RL  ++A   K+
Sbjct: 325 AAWRGFGVEAYVFISLIYFVFCFSMSKYSQRLEKRLATGHKR 366


>gi|260463004|ref|ZP_05811207.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259031125|gb|EEW32398.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 224

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 64/94 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+   A FI EIV +G+ +VP GQ+EAA+A GL+  +  R V+LPQAMR ++P
Sbjct: 89  FTAGIIALTNLAACFICEIVVAGIRSVPTGQVEAALASGLSRWQRLRQVVLPQAMRIVLP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PL  QY+ L+K+SS+  A+G  DL  VG  ++ +
Sbjct: 149 PLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQR 182


>gi|116748260|ref|YP_844947.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116697324|gb|ABK16512.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 246

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPV 250
           +G  L +F   ++R       +   +LY+  F   G P L+ I + Y      +H+D PV
Sbjct: 61  MGFCLGVFGG-IARTSRSVLARETAMLYVEFFR--GTPLLIQIYIFYFCVAAAVHYDNPV 117

Query: 251 L-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           + G F+                 L+ ++ A+I E+VR+G+ ++ RGQ+EAA++ GL   +
Sbjct: 118 IIGMFS-----------------LAVFSGAYITEMVRAGIESIDRGQIEAAMSTGLNDWE 160

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA R IIPP+  Q+++++K+SSL   +   +L      I   T +  E  L 
Sbjct: 161 TMRYVVFPQAFRRIIPPVAGQFVSVIKDSSLLSVISVRELTKASEIINATTYKTFEAYLP 220

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              +YL ++  ++    RL  KI
Sbjct: 221 LAALYLIITYPLSYLTQRLEQKI 243


>gi|291459896|ref|ZP_06599286.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417237|gb|EFE90956.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 228

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 113/212 (53%), Gaps = 16/212 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGK-ALPLLYISTFL--IFGLPTLVLIALKYQLH 245
           I VF+ ++G+ L L    + R   ++TGK  +P  +   +L  I G PT++ + + Y   
Sbjct: 30  ITVFALLIGVALGLLIA-IIRTTADRTGKWRIPDFFCRIYLTVIRGTPTMIQLMIFYYCI 88

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F    +G+F F G    S       IA    +AA++AEI+RSG++++P GQMEA  +LG 
Sbjct: 89  F----VGRF-FSGVFVAS-------IAFGLNSAAYVAEIIRSGILSIPAGQMEAGRSLGF 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + +  R +++PQA ++++P + ++++ L+K +++A  V   DL      I  QT  A  
Sbjct: 137 NYVETMRYIIMPQAFKNVLPAIFNEFIVLIKETAVAGYVSVRDLTKGADNIRAQTYDAWL 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L    IYL L++       +L  ++   E+
Sbjct: 197 PLLAAGLIYLILTMFFTTLEKKLERRLKQGER 228


>gi|239833590|ref|ZP_04681918.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821653|gb|EEQ93222.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 335

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 75/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI R+G+ ++PRGQ E A ALGL   +   LV+LPQAMR IIPP  +Q
Sbjct: 208 LALSLCYGAYMTEIFRAGIESIPRGQQEGAAALGLGPSQTMWLVILPQAMRIIIPPTGNQ 267

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL   +G  +L+ +  T      + IE+++    IY +LS+++     +L A
Sbjct: 268 FIAMLKDSSLVSVIGVWELMYLARTQGQTEFRHIEMLITASMIYWALSVVLEYGQAKLEA 327

Query: 391 K 391
           +
Sbjct: 328 R 328


>gi|238853899|ref|ZP_04644262.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|238833485|gb|EEQ25759.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
          Length = 498

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+   + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++
Sbjct: 370 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 429

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L+     +   T + +  + I M IY  ++  +   +N    
Sbjct: 430 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 489

Query: 391 KI 392
           ++
Sbjct: 490 RM 491


>gi|282851008|ref|ZP_06260382.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311111018|ref|ZP_07712415.1| amino acid ABC transporter, permease/substrate-binding protein
           [Lactobacillus gasseri MV-22]
 gi|282557960|gb|EFB63548.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311066172|gb|EFQ46512.1| amino acid ABC transporter, permease/substrate-binding protein
           [Lactobacillus gasseri MV-22]
          Length = 498

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+   + A++AE +RSG+ ++P+GQMEAA +LGL+ +KA R V++PQA+++I P L ++
Sbjct: 370 IAIGLNSGAYVAEDIRSGIDSLPKGQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNE 429

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +G A+L+     +   T + +  + I M IY  ++  +   +N    
Sbjct: 430 FITLLKDSSLVSVIGVAELMYQTQLVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEK 489

Query: 391 KI 392
           ++
Sbjct: 490 RM 491


>gi|222148129|ref|YP_002549086.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735117|gb|ACM36080.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 219

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 63/99 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL+C+TAAF+ EI R  + AVP+GQ EA  +L LT+R+  RL++LPQAMR  
Sbjct: 84  PAWLAAGVALTCWTAAFLTEIWRGCVEAVPKGQWEAGTSLALTYRQQMRLIILPQAMRIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           I P     + ++K ++L   +GF +L   G  + N T Q
Sbjct: 144 IAPTAGFSVQVVKGTALTSIIGFVELSKAGTIVTNATFQ 182


>gi|15902771|ref|NP_358321.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|15458319|gb|AAK99531.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
          Length = 229

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 117/210 (55%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+ F  R          K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 35  ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 84

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++EIVR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 85  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSEIVRAGINAVPKGQLEAAYSLGIRPK 139

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 140 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 199

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 200 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 229


>gi|320546339|ref|ZP_08040656.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Streptococcus equinus ATCC 9812]
 gi|320448993|gb|EFW89719.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Streptococcus equinus ATCC 9812]
          Length = 228

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 106/179 (59%), Gaps = 14/179 (7%)

Query: 223 YISTFLIF---GLPTLVLIALKYQ-LHF-DKPVLGQFNFIGGSTVSPEFMSLY---IALS 274
           +I++F ++   G P +V I + +  +HF + P+      +G   +  +F  L    I +S
Sbjct: 51  WITSFYVWVFRGTPMVVQIMIAFAWMHFSNAPI------VGFGVLDLDFSRLLPGIIIIS 104

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             + A+I+EIVR+G+ AVP+GQ+EAA +LG+    A R V+LPQA+++I+P L ++++ +
Sbjct: 105 LNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITI 164

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +K+SSL   +G  +L +   +++  T   I  +L   F YL ++ +++  + +L  ++ 
Sbjct: 165 IKDSSLLQTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVLSFLLKKLETRMG 223


>gi|300718488|ref|YP_003743291.1| Amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064324|emb|CAX61444.1| Amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 308

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 28/278 (10%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  LVV+  L  +V S++  P     +    F     L    +T+   A   V  F  
Sbjct: 23  RWISALVVLLMLAAAVSSMVQNPRFEWQVIADSFTQQSILQGVLMTLQLTAISVVLGFTG 82

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALKY-------QLH 245
           G VL+L   RLS +         P+L    +  T+   G+P LV + L Y       ++ 
Sbjct: 83  GTVLALM--RLSSN---------PVLVSVSWAYTWFFRGVPMLVQLFLWYNIAALYPKVS 131

Query: 246 FDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              P +G+ ++    S +SP F +  IAL  + AA+ AEIVR+G+ +V  GQ+EAA ALG
Sbjct: 132 VSLPWVGELWSASSNSLISP-FSAAVIALVMHQAAYAAEIVRAGIQSVGNGQLEAAKALG 190

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
               +  R  +LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T Q I
Sbjct: 191 YRPSEIFRYTVLPQAMRAILPPAGNEIIGQLKTTAVVSVIALQDVLFSAQIIYQRTYQVI 250

Query: 365 EIILIWMFIYLSLSIMIAL---FMNRLNAK-IALKEKK 398
            ++L+    YL ++ ++++   ++ R  A+ +  KEK+
Sbjct: 251 PLLLVATLWYLLMTSVLSVGQFYVERYFARGVTRKEKR 288


>gi|77460758|ref|YP_350265.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77384761|gb|ABA76274.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 223

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +LG +L+L     S+      G      +++PLL + T+    +P      L++    D 
Sbjct: 35  ILGTLLALMRLSHSKLLSSIAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+               F S  +A   + AA+  EIVR+G+ ++P+GQM AA ALG+T+ 
Sbjct: 91  PI-------------GAFTSCIVAFMMFEAAYFCEIVRAGVQSIPKGQMGAAQALGMTYG 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RL++LPQA R + P L  Q + L +++SL   VG  D ++      +  G++ E ++
Sbjct: 138 QMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRASGDIIGRSNEFLI 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               +Y ++S   ++ + RL  + A+
Sbjct: 198 FAGLVYFTISFAASVLVKRLQKRFAV 223



 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L   G++   I+GTL+   RLS +KL++ I   YV  FR+IP L+VI + Y +
Sbjct: 18  GMLMTLKLMALGVVGGIILGTLLALMRLSHSKLLSSIAGAYVNYFRSIPLLLVITWFYLA 77

Query: 152 VLSVL 156
           V  VL
Sbjct: 78  VPFVL 82


>gi|83746636|ref|ZP_00943686.1| GltK [Ralstonia solanacearum UW551]
 gi|207742331|ref|YP_002258723.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           IPO1609]
 gi|83726770|gb|EAP73898.1| GltK [Ralstonia solanacearum UW551]
 gi|206593721|emb|CAQ60648.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           IPO1609]
          Length = 227

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 78/125 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      +D  +    I  + G+ +E++L   F+Y  +    ++ + R
Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKR 220

Query: 388 LNAKI 392
           L  K+
Sbjct: 221 LQKKV 225


>gi|111023903|ref|YP_706875.1| glutamate transport system permease protein GluC [Rhodococcus
           jostii RHA1]
 gi|110823433|gb|ABG98717.1| glutamate transport system permease protein GluC [Rhodococcus
           jostii RHA1]
          Length = 215

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 80/134 (59%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +   AL+ Y +AF  E VRSG+ A+P GQ EA  ++GLT   + R ++LPQA RS+
Sbjct: 82  PFFWAAVAALAIYYSAFFCEAVRSGINAIPVGQFEAGRSIGLTFGGSLRYIVLPQAFRSV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIA 382
           +PPL + ++ L K+S++A A G A+L++    +I +  QA+  IL     +YL ++I   
Sbjct: 142 VPPLINVFIALTKSSAIASAFGVAELLTRAEGVIAEESQAVLWILAATSLLYLVITIPAG 201

Query: 383 LFMNRLNAKIALKE 396
              N +  K+A+  
Sbjct: 202 TIANLVEKKVAVAR 215


>gi|307321129|ref|ZP_07600533.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306893204|gb|EFN23986.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 323

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI R+G+ ++PRGQ E A ALGL+  +   LV+LPQAMR IIPP  +Q
Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPRGQTEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQ 255

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL   VG  +L+ +  T      + IE+++    IY  LSI +    +R+ A
Sbjct: 256 FIAMLKDSSLISVVGVWELMYLARTQGQTEFRHIEMLITASMIYWILSIGLEYMQSRVEA 315

Query: 391 K 391
           +
Sbjct: 316 R 316


>gi|58040006|ref|YP_191970.1| amino acid ABC transporter permease [Gluconobacter oxydans 621H]
 gi|58002420|gb|AAW61314.1| Amino acid ABC transporter binding protein and permease protein
           [Gluconobacter oxydans 621H]
          Length = 508

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 28/177 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP                         G  +SP FM+  ++L   
Sbjct: 347 RGTPLLIQVLFIFYGLPAF-----------------------GIRLSP-FMAGVLSLGLN 382

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AE  R+GL++VPRGQMEAAIAL +TH +A RLV++PQA R+++P +T+ +++LLK
Sbjct: 383 YAAYEAENYRAGLLSVPRGQMEAAIALNMTHWQALRLVIVPQAFRTVVPVMTNDFISLLK 442

Query: 337 NSSLAVAVGFADL----VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +SSL   +   +L    V +  T  +  G  I + L ++ + L    +  +   RL 
Sbjct: 443 DSSLVSVITLTELSQTYVRLSSTYYDYFGTGIMVGLAYLLLGLPFVRLARMAERRLG 499


>gi|300791008|ref|YP_003771299.1| polar amino acid ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299800522|gb|ADJ50897.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 315

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 73/111 (65%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L    AA++AEIVR G+ +V  GQ+EAA ALG++  +  R ++LPQAMR II
Sbjct: 161 QFTASLLGLGLNEAAYMAEIVRGGIQSVDSGQLEAASALGMSRTRTLRRIILPQAMRVII 220

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           PP  ++ +++LK +SL VA+G+ +L+    TI +Q  + + ++++    YL
Sbjct: 221 PPTGNETISMLKTTSLVVAIGYFELMVAAQTIYSQNLKTVPLLIVAALWYL 271


>gi|116513635|ref|YP_812541.1| ABC-type amino acid transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092950|gb|ABJ58103.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 222

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 15/213 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +    + SFV+G+ L L   R +R    KT +   ++ +   +I  LP L++I  
Sbjct: 22  VTIEVSVISIILSFVIGLALGLI--RFTR-IDAKTTRISKVVGVIIDIIRNLPLLLIIFF 78

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F  PV+G             F +  IA+  + +A IAE+VRSG++AV  GQME A
Sbjct: 79  SY---FGLPVMG--------IRVDAFQASVIAMVVFESAMIAEVVRSGIMAVDPGQMEGA 127

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359
            + G+T+ +A   V+ PQA+  +IP L SQ+++L+K++SLA  +   +L+     I NQ 
Sbjct: 128 RSNGMTYMQAMTHVVFPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEIIYNQN 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T   I + L    +Y  +   ++ F N L+ +I
Sbjct: 188 TKYMIPMYLAVAVMYFIICFALSSFANYLSKRI 220


>gi|319782447|ref|YP_004141923.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168335|gb|ADV11873.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 224

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 64/94 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+   A FI EIV +G+ +VP GQ+EAA+A GL+  +  R V+LPQAMR ++P
Sbjct: 89  FTAGIIALTNLAACFICEIVVAGIRSVPTGQVEAALASGLSRWQRMRQVVLPQAMRIVLP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PL  QY+ L+K+SS+  A+G  DL  VG  ++ +
Sbjct: 149 PLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQR 182


>gi|312959229|ref|ZP_07773747.1| glutamate/aspartate transport system permease [Pseudomonas
           fluorescens WH6]
 gi|311286489|gb|EFQ65052.1| glutamate/aspartate transport system permease [Pseudomonas
           fluorescens WH6]
          Length = 223

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 23/206 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +LG +L+L     S+      G      +++PLL + T+    +P      L++    D 
Sbjct: 35  ILGTLLALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+               F S  +A   + AA+  EIVR+G+ ++P+GQM AA A+G+T+ 
Sbjct: 91  PI-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSIPKGQMSAAQAMGMTYG 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G++ E ++
Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSNEFLI 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               +Y  +S   +L + RL  + A+
Sbjct: 198 FAGVVYFIISFSASLLVKRLQKRFAV 223



 Score = 43.9 bits (102), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   I+GTL+   RLS++KL++ +   YV  FR+IP L+VI + Y +
Sbjct: 18  GMVMTLQLMVMGVVGGIILGTLLALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLA 77

Query: 152 VLSVL 156
           V  VL
Sbjct: 78  VPFVL 82


>gi|300783425|ref|YP_003763716.1| amino acid ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299792939|gb|ADJ43314.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 292

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 12/191 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + VLGIV++L      R       +     YI  F   GLP L+ I L Y L    PV+ 
Sbjct: 72  AIVLGIVIALL-----RRSANPVARWFAAGYIWIF--RGLPVLLQILLWYNLALVFPVID 124

Query: 253 QFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               +   T  +   F + ++ L+   +A++AEIVR+GL +V  GQ EAA ++G+T    
Sbjct: 125 IPFLVHEQTNVLISAFTAAFLGLALNESAYMAEIVRAGLNSVDSGQTEAAKSIGMTPAAT 184

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-- 368
            R V+LPQAMR IIPP  + ++N+LK +S+A  +G  +L+     I +     +E +L  
Sbjct: 185 LRRVVLPQAMRVIIPPTGNDFINMLKGTSMASVIGVTELIHAANNISSNNLLVMETLLAA 244

Query: 369 -IWMFIYLSLS 378
            +W  + ++++
Sbjct: 245 AVWYMVVVTVA 255



 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +NT  LA      A ++G ++   R SAN +  W    Y+ +FR +P L+ I   Y  
Sbjct: 57  GLLNTVVLAVLSQAVAIVLGIVIALLRRSANPVARWFAAGYIWIFRGLPVLLQILLWYNL 116

Query: 152 VLSVLPIPDHSIVLPF 167
            L V P+ D    +PF
Sbjct: 117 AL-VFPVID----IPF 127


>gi|257463486|ref|ZP_05627880.1| amino acid ABC transporter permease [Fusobacterium sp. D12]
 gi|317061044|ref|ZP_07925529.1| amino acid ABC transporter permease [Fusobacterium sp. D12]
 gi|313686720|gb|EFS23555.1| amino acid ABC transporter permease [Fusobacterium sp. D12]
          Length = 225

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 85/147 (57%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   IA    + A++AEI+R+G+  + +GQ EA  ALGL++ +
Sbjct: 79  ILANIVFVGALRETPILLVAGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQ 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + +++PQA++ I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 139 TMKFIIIPQAIKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLA 198

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +  + M ++   + + +
Sbjct: 199 VGIIYLILTSIFTILMRKVEKGLKVSD 225


>gi|161870370|ref|YP_001599540.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis 053442]
 gi|161595923|gb|ABX73583.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis 053442]
          Length = 213

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL S+
Sbjct: 87  LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPPLASE 146

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 147 FITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 206

Query: 391 K 391
           +
Sbjct: 207 R 207


>gi|296269105|ref|YP_003651737.1| polar amino acid ABC transporter inner membrane subunit
           [Thermobispora bispora DSM 43833]
 gi|296091892|gb|ADG87844.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobispora bispora DSM 43833]
          Length = 288

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 3/103 (2%)

Query: 258 GGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           GGS    V  EF ++   L+ Y  + +AEIVR+G+ AVPRG+ EA  A+GL   +  RL+
Sbjct: 127 GGSLLGLVVSEFAAVVFGLTVYNGSVLAEIVRAGIRAVPRGESEAGYAMGLRKNQVMRLI 186

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           LLPQA+ S++P + SQ + LLK+++L   V +ADL++ G  ++
Sbjct: 187 LLPQAITSMMPAIVSQLVVLLKDTALGFIVAYADLLNAGARVV 229


>gi|330505354|ref|YP_004382223.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328919640|gb|AEB60471.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01]
          Length = 248

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R IIP
Sbjct: 111 YLSVVVCLGLFTAARVCEQVRTGIEALPKGQTAAAYAMGFRLPQIYTNVLLPQAYRIIIP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN+ KNSS+A  +G  +L++        +    E   +   IY +L++ + + M
Sbjct: 171 PLTSEFLNIFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMMIM 230

Query: 386 NRLNAKIAL 394
             +  K+A+
Sbjct: 231 RMIEKKVAV 239



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 12/104 (11%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
           N   GI F S   G E            +Y    + G   T  +A +G I A  +G+L+G
Sbjct: 4   NWDWGIYFKSTGIGSE------------TYLDWFITGLGWTIAIALAGWIIALALGSLLG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
             R   N+ ++ +   YVE+FRN+P LV +F  Y  V  +LP P
Sbjct: 52  VMRTLPNRWLSGLATAYVEIFRNVPLLVQLFLWYFLVPDLLPEP 95


>gi|209527655|ref|ZP_03276153.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
 gi|209491883|gb|EDZ92240.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
          Length = 168

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 69/129 (53%), Gaps = 1/129 (0%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N+  N+++S +  G GFL+  AGF I + I+PY     Y   +L G VNT  + F G+I 
Sbjct: 41  NLNQNLQRSGIRFGFGFLNSTAGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIIL 100

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
            TI+G + G    S N LV  I  VYVE+ RN P L+ + F Y   L + P+ D   V  
Sbjct: 101 TTIVGIVAGISYFSGNWLVRQIGLVYVEIVRNTPLLLQLLFWYGIFLQLPPVRDRLGVFN 160

Query: 167 FGMFLNNRG 175
             +FL  RG
Sbjct: 161 -AIFLTQRG 168


>gi|194017115|ref|ZP_03055727.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
 gi|194010983|gb|EDW20553.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
          Length = 237

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 104/191 (54%), Gaps = 10/191 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R F     + L  LY+S F   G P +V L A  Y L F   VL + N   G T  P+ +
Sbjct: 45  RLFRIPVLRQLVTLYVSFFR--GTPLIVQLFAFFYGLPF---VLTKVNDTFGLTFHPDMV 99

Query: 268 S-LYIAL---SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           S L +AL   S ++AA + E+VRS L+AV +GQ+EAA  +G+T R+A   ++LPQA    
Sbjct: 100 SPLAVALITFSLHSAAHLTEVVRSALLAVDKGQLEAAKIVGMTTRQAMMRIILPQAFVVA 159

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +Q + LLK +SL+  +G  +++ +   I N   Q +E  L+   IY  LSI   L
Sbjct: 160 LPNLGNQLIQLLKATSLSFTIGVLEIMGISRIIANDGYQFLETYLVSALIYWLLSIFFEL 219

Query: 384 FMNRLNAKIAL 394
               L  ++++
Sbjct: 220 AFALLEKRVSV 230


>gi|154686886|ref|YP_001422047.1| GlnP [Bacillus amyloliquefaciens FZB42]
 gi|154352737|gb|ABS74816.1| GlnP [Bacillus amyloliquefaciens FZB42]
          Length = 218

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 101/181 (55%), Gaps = 27/181 (14%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T + LPLL I  F  F LP    I +K +             I  + ++        AL
Sbjct: 60  ETIRNLPLLLIIFFTFFALPE---IGIKLE-------------ITAAAIT--------AL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + +A ++EI+RSGL +V +GQ+EAA + GLT+ +   LV++PQA+R ++PP+ SQ+++
Sbjct: 96  TIFESAMLSEIIRSGLQSVDKGQIEAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           LLK++SLAV +   +L+     +  Q+   G    I L+   +Y +++  ++L   RL A
Sbjct: 156 LLKDTSLAVVIALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYCLSLAARRLEA 215

Query: 391 K 391
           +
Sbjct: 216 R 216


>gi|119896731|ref|YP_931944.1| putative glutamine transport permease [Azoarcus sp. BH72]
 gi|119669144|emb|CAL93057.1| putative glutamine transport permease protein [Azoarcus sp. BH72]
          Length = 226

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 73/127 (57%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S Y   + + AA+ AEI+RSG+ ++PRGQ+ A  ALG T+ +  RLV+LPQA R+++P L
Sbjct: 98  SAYFTFTVFEAAYFAEIMRSGIQSIPRGQIGAGYALGFTYGQTMRLVVLPQAFRNMLPVL 157

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L ++ SL  A+G  D       I  +  + +E+      +Y  L   ++  + R
Sbjct: 158 LTQTIVLFQDVSLVYAIGATDFFGAADKITQRDLRPVEMYTTVAAVYFVLCFSLSRLVKR 217

Query: 388 LNAKIAL 394
           L  +IA+
Sbjct: 218 LQTRIAI 224


>gi|226331012|ref|ZP_03806530.1| hypothetical protein PROPEN_04942 [Proteus penneri ATCC 35198]
 gi|225201807|gb|EEG84161.1| hypothetical protein PROPEN_04942 [Proteus penneri ATCC 35198]
          Length = 224

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 255 NFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           N +G S  S    +S  IA S + AA+ +EI+R+G+ +V +GQ  A++ALG+T  +  RL
Sbjct: 85  NVLGLSPKSDIRLISAMIAFSLFEAAYYSEIIRAGIQSVSKGQFSASLALGMTKSQTMRL 144

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA R++IP L +Q + L +++SL   +   D       I  + G  +E+IL   F+
Sbjct: 145 VILPQAFRAMIPLLLTQGIVLFQDTSLVYVLSLTDFFRTAANIGERDGTQVEMILFAGFV 204

Query: 374 YLSLSIMIALFMNRLNAK 391
           Y  +S   ++ +N L  +
Sbjct: 205 YFVISFAASMLVNFLKKR 222


>gi|28870094|ref|NP_792713.1| glutamine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28853340|gb|AAO56408.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 233

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   I  S  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213


>gi|330957764|gb|EGH58024.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 221

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 23/220 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T+   A   V   +LG VL+L     ++      G      +++PLL + T+    +P 
Sbjct: 19  MTLKLMAMGVVGGLLLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                L++    D P+               F S  +A   + AA+  EIVR+G+ ++ +
Sbjct: 78  ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   
Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 182 SSGDIIGRANEFLVIAGLVYFTISFAASLLVKRLQKRFAV 221



 Score = 43.5 bits (101), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 40/65 (61%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   ++GT++   RLS+NKL+A +   YV  FR+IP L+VI + Y +
Sbjct: 16  GMVMTLKLMAMGVVGGLLLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75

Query: 152 VLSVL 156
           V  VL
Sbjct: 76  VPFVL 80


>gi|325273126|ref|ZP_08139423.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324101731|gb|EGB99280.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 229

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 110/205 (53%), Gaps = 17/205 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   V   +L I L +   R SRH++ +   A+P  YI  F   G P LV + L
Sbjct: 19  LTLELVAIAVVAGLILAIPLGI--ARSSRHWYVR---AVPFSYI--FFFRGTPLLVQLFL 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            Y        L QF+ +  S + P     F    + ++ +TAA+IAEI+R  L ++P+G+
Sbjct: 72  VYY------GLAQFDAVRSSALWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQSIPKGE 125

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALG++  K    ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  TI
Sbjct: 126 IEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTI 185

Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381
           I +T   +EI       YL++S ++
Sbjct: 186 IARTYLPVEIFFAAGVFYLAISFLL 210


>gi|169668088|gb|ACA64430.1| amino acid ABC tansporter permease protein [Campylobacter fetus
           subsp. venerealis NCTC 10354]
          Length = 240

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 93/152 (61%), Gaps = 16/152 (10%)

Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           PVL Q   F F+  +T+S  F +  IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL
Sbjct: 91  PVLLQLMIFAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGL 150

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI- 364
           ++  + R ++ PQA+++I+P L +++++L K +S+   +G  DL     T+ +++ QA  
Sbjct: 151 SYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDL-----TMQSKSLQATL 205

Query: 365 ---EIILIWMFIYLS----LSIMIALFMNRLN 389
              E IL    IY +     S++  L  NRLN
Sbjct: 206 FSPEPILFAGVIYYANVKFFSLLAKLLENRLN 237


>gi|148379165|ref|YP_001253706.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932298|ref|YP_001383541.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153936492|ref|YP_001387090.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. Hall]
 gi|168178599|ref|ZP_02613263.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226948447|ref|YP_002803538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
 gi|148288649|emb|CAL82730.1| putative cystine ABC transporter, permease protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928342|gb|ABS33842.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152932406|gb|ABS37905.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. Hall]
 gi|182670787|gb|EDT82761.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226842057|gb|ACO84723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
 gi|322805500|emb|CBZ03064.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           H04402 065]
          Length = 222

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 100/176 (56%), Gaps = 15/176 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L +  +T+       + + + G++L++      R +  K   ++  +YIS F   G P L
Sbjct: 17  LKYAHITLSIAILSMIIAVLFGVILAVI-----RMYKVKVLHSISEIYISFFR--GTPIL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y         G    I      P +M++ IALS   +A++AEI+R  ++++ +G
Sbjct: 70  IQLFLFY--------YGLPQIIPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKG 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QMEA+++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG A+++S
Sbjct: 122 QMEASLSLGMTEFQAMKRIILPQAARIAIPSLGNSFIDLLKSSSLAFTVGVAEILS 177


>gi|207727926|ref|YP_002256320.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           MolK2]
 gi|206591168|emb|CAQ56780.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           MolK2]
          Length = 227

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 78/125 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      +D  +    I  + G+ +E++L   F+Y  +    ++ + R
Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKR 220

Query: 388 LNAKI 392
           L  K+
Sbjct: 221 LQKKV 225


>gi|311280750|ref|YP_003942981.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749945|gb|ADO49697.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 260

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 97/185 (52%), Gaps = 13/185 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKPVLG--QFNFIGGST--V 262
           +TG AL   ++S F     P LV +   Y        L F   V G  +F+ + G+   +
Sbjct: 53  RTGAALTACWVSIFR--NTPLLVQLLFWYFAAWNLLPLGFRDIVNGVYRFSVLPGNVWWL 110

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +PEF+     L+ +T+AF+ E V +GL AVP GQ EAA A G +     R +LLPQA+ +
Sbjct: 111 TPEFLCSAWGLAAFTSAFLVEEVTAGLRAVPLGQYEAAQAQGFSAPALFRHILLPQALAN 170

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
              P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL   +++ 
Sbjct: 171 AWQPVVGQYLNLMKLSSLASGIGFAELTCQVRQIESYNAHALEAFALGTALYLLTGVLMG 230

Query: 383 LFMNR 387
           L + R
Sbjct: 231 LTLTR 235


>gi|300705159|ref|YP_003746762.1| glutamate/aspartate ABC transporter membrane component [Ralstonia
           solanacearum CFBP2957]
 gi|299072823|emb|CBJ44179.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CFBP2957]
          Length = 227

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 78/125 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      +D  +    I  + G+ +E++L   F+Y  +    ++ + R
Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKR 220

Query: 388 LNAKI 392
           L  K+
Sbjct: 221 LQKKV 225


>gi|148974813|ref|ZP_01811793.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145965322|gb|EDK30571.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 265

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 21/209 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            I + S V  +V+ L  T L R+ H   G+ L   Y+   LI   P LV I   Y L+F 
Sbjct: 69  NISLISLVATLVIGL-TTALLRNSHSVVGRTLATSYVE--LIRNTPLLVQI---YLLYFV 122

Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV+G             F +  +AL+ +  A+ AEI R+GL ++ +GQ EAA +LGL+
Sbjct: 123 FGPVIGL----------DRFSTAVLALALFQGAYTAEIFRAGLNSISKGQFEAAQSLGLS 172

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                  V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T    EI
Sbjct: 173 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 232

Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAK 391
                +I++ + LSLS + A   ++L A 
Sbjct: 233 WFSVAIIYLALTLSLSAVAAWLEHKLGAN 261


>gi|163938565|ref|YP_001643449.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|229131585|ref|ZP_04260468.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
 gi|163860762|gb|ABY41821.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|228651876|gb|EEL07830.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
          Length = 214

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 90/162 (55%), Gaps = 37/162 (22%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP      LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                               ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPEL 171



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|298293508|ref|YP_003695447.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930019|gb|ADH90828.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 226

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 112/203 (55%), Gaps = 14/203 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF LG+ L  F T L+R +  +    L   Y+  ++I G P LV +   + + +  P 
Sbjct: 28  LLSFALGLTLG-FLTALARLYGPRPLAGLARFYV--WIIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EIVR+ + ++P+GQ EA+ ++G++  +A
Sbjct: 82  VG--------ILLDAFPAALIGFTLNVGAYSSEIVRAVIASIPKGQWEASYSIGMSWSQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R  +LPQA R+ +PPL++ +++L+K++SLA AV   +L      I+  T + + I +  
Sbjct: 134 LRRTVLPQAARTAVPPLSNTFISLVKDTSLAAAVTVPELFQAAQRIVAVTYEPLIIYIEA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IYL+LS +++   +RL  ++A
Sbjct: 194 ALIYLALSSVLSALQDRLEKRLA 216


>gi|283853863|ref|ZP_06371079.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283570738|gb|EFC18782.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 231

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 18/201 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG+ + LF     R           ++YI   +I G P L+++   +  +F  PVL 
Sbjct: 40  AFWLGLGIGLFRISKLRRLRWPA-----MVYIE--IIRGTPLLMVV---FWFYFLAPVLL 89

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                 G T+ PE  S  IAL  +T+A+IAEIVR+G+ A+P+GQMEAA   GL H +   
Sbjct: 90  ------GKTL-PEAQSALIALIVFTSAYIAEIVRAGVEALPKGQMEAARGTGLNHFQTMT 142

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWM 371
            V+LPQA+ ++IP   +Q+++L K++SLA  +G  +L      + ++T  A  EI +   
Sbjct: 143 HVILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVNELTKAATQVNSRTLTAPTEIFITIA 202

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            +Y  +   +     RL   I
Sbjct: 203 LLYFVICYCLTELSRRLEKHI 223



 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  LA  G+  A  +G  +G  R+S  + + W   VY+E+ R  P L+V+F+ Y
Sbjct: 23  LGGLAMTVLLAVGGIFGAFWLGLGIGLFRISKLRRLRWPAMVYIEIIRGTPLLMVVFWFY 82


>gi|330877713|gb|EGH11862.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330965186|gb|EGH65446.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 233

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   I  S  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213


>gi|222099044|ref|YP_002533612.1| Amino acid ABC transporter, permease protein [Thermotoga
           neapolitana DSM 4359]
 gi|221571434|gb|ACM22246.1| Amino acid ABC transporter, permease protein [Thermotoga
           neapolitana DSM 4359]
          Length = 216

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 17/166 (10%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           I G P +V + L Y   F  P LG +F+          F +  +AL   + A++AEIVR+
Sbjct: 62  IRGTPLMVQLFLVY---FGLPELGLEFD---------RFTAAVVALGINSGAYVAEIVRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +VP+GQ EAA +LG++H +A   V+LPQA R I+P L ++++ L K+SSLA+ +G  
Sbjct: 110 GIQSVPKGQYEAARSLGMSHFQAMVHVILPQAFRHILPALGNEFIALAKDSSLAMVIGTV 169

Query: 348 DLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMIALFMNRLN 389
           +L+     I+++T  +  I     LI+  I  S+S ++     RL 
Sbjct: 170 ELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVRFVEGRLK 215



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++    IG  VG GRLS  +++ +   VYVE  R  P +V +F +
Sbjct: 15  LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFIRGTPLMVQLFLV 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|226327563|ref|ZP_03803081.1| hypothetical protein PROPEN_01434 [Proteus penneri ATCC 35198]
 gi|225204089|gb|EEG86443.1| hypothetical protein PROPEN_01434 [Proteus penneri ATCC 35198]
          Length = 206

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 62/85 (72%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++  + L+ Y+  FIAE +R+G+  V +GQ  AA+ALGLT  ++ R V+LPQA R  +
Sbjct: 74  EFLAGIVGLTFYSTPFIAEELRAGIQGVKQGQKYAALALGLTPWQSMRYVILPQAFRIAL 133

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL  QY+N++KNSSL +A+G A+L
Sbjct: 134 PPLLGQYMNVIKNSSLTMAIGVAEL 158


>gi|256851551|ref|ZP_05556940.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii 27-2-CHN]
 gi|260660974|ref|ZP_05861889.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii 115-3-CHN]
 gi|282932630|ref|ZP_06338046.1| probable amino-acid ABC transporter permease protein [Lactobacillus
           jensenii 208-1]
 gi|297206366|ref|ZP_06923761.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|256616613|gb|EEU21801.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii 27-2-CHN]
 gi|260548696|gb|EEX24671.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii 115-3-CHN]
 gi|281303262|gb|EFA95448.1| probable amino-acid ABC transporter permease protein [Lactobacillus
           jensenii 208-1]
 gi|297149492|gb|EFH29790.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 220

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 32/223 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    V S+++G++L        ++     G      + LPLL I  F  FG P 
Sbjct: 22  VTVEVSIISIVLSYIIGLILGTIRYMKIKYVSAIVGVIIDIIRNLPLLLIIFFTYFGFPE 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L                       G   SP F +   AL  + +A +AEIVR G+ AVP 
Sbjct: 82  L-----------------------GIHASP-FWAAISALVIFESAMLAEIVRGGIQAVPD 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A + G+T+ +A R V++PQAM  ++P L SQ+++L+K++SLA  +   +L+    
Sbjct: 118 GQMEGARSNGMTYLQAMRYVIMPQAMHMMMPALLSQFVSLVKDTSLATIIILPELLYHAQ 177

Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I +Q T   I + LI   +Y  +   ++LF  RL  K+  KE
Sbjct: 178 IIYSQNTTYMIPMYLIIAAMYFVVCFALSLFAQRLRKKLG-KE 219


>gi|188532630|ref|YP_001906427.1| GltJ protein [Erwinia tasmaniensis Et1/99]
 gi|188027672|emb|CAO95523.1| GltJ protein [Erwinia tasmaniensis Et1/99]
          Length = 255

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 66/106 (62%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S ++PEF+ +   L  +TAAF+ E V++GL +VP+GQ EAAI+ G +     R +LLPQA
Sbjct: 108 SWLTPEFLCVVWGLGLFTAAFLVEEVQAGLNSVPKGQREAAISQGFSRWTLLREILLPQA 167

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           + +   P+  QYLNL+K SSLA  +GF++L      I +    A E
Sbjct: 168 LTNAWQPVAGQYLNLMKLSSLATGIGFSELTYQVSRIESYNAHAFE 213



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 39/69 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ GF+ TF+++    + +T++  L+ A RLS +++       +V +FRN P LV + F 
Sbjct: 19  IISGFLTTFYVSLIASLFSTLLVVLLLAMRLSPSRIAQGAVSAFVSLFRNTPLLVQLLFW 78

Query: 149 YKSVLSVLP 157
           Y +    LP
Sbjct: 79  YFAAWGALP 87


>gi|209966387|ref|YP_002299302.1| general L-amino acid transport system permease protein AapM
           [Rhodospirillum centenum SW]
 gi|209959853|gb|ACJ00490.1| general L-amino acid transport system permease protein AapM
           [Rhodospirillum centenum SW]
          Length = 365

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 67/101 (66%), Gaps = 1/101 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV  + +   + L  + AA++AE+VR GL A+P+GQ EAA ALGL++ + TRL++LPQ
Sbjct: 224 GVTVD-KLLRAQVGLILFAAAYLAEVVRGGLQAIPKGQYEAAAALGLSYWQRTRLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+  +IPPL + ++   K++SL + +G  DL+S   T +  
Sbjct: 283 ALGLVIPPLVNTFIGFFKDTSLVIIIGLMDLLSTAKTALTD 323


>gi|301066392|ref|YP_003788415.1| amino acid ABC transporter permease/periplasmic protein
           [Lactobacillus casei str. Zhang]
 gi|300438799|gb|ADK18565.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei str. Zhang]
          Length = 485

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 4/130 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  IA+S  +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+    V+LPQA+++I
Sbjct: 353 PALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNI 412

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379
            P L +++++L+K SS+   +G  DL+     +   T + ++ IL+ M +Y      LS 
Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSK 472

Query: 380 MIALFMNRLN 389
           +++ F  ++N
Sbjct: 473 LLSHFERKMN 482


>gi|271500710|ref|YP_003333735.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344265|gb|ACZ77030.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 214

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 78/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS Y  A+IAE+ R+G+ AVP+GQ E +  LGL+ R+    V+LPQ    ++P
Sbjct: 85  FAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGLSKRQTFLSVILPQTRGIVLP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLT QYL+L+K++S+   +G ++L+  G  I+++ GQ + I  +   +Y ++   ++ ++
Sbjct: 145 PLTGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPVIIYGLVALLYFAVCFPLSRWV 204

Query: 386 NRLNAK 391
               A+
Sbjct: 205 QHHQAR 210


>gi|253689718|ref|YP_003018908.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756296|gb|ACT14372.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 254

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ +  R V+LPQA R ++P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMETRFGKSDSR 254


>gi|225075407|ref|ZP_03718606.1| hypothetical protein NEIFLAOT_00412 [Neisseria flavescens
           NRL30031/H210]
 gi|224953225|gb|EEG34434.1| hypothetical protein NEIFLAOT_00412 [Neisseria flavescens
           NRL30031/H210]
          Length = 248

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A++ EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL  +
Sbjct: 122 MALIANSGAYVCEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLAGE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +   +L+SV   I  Q     E +     IYL L+ ++     RL  
Sbjct: 182 FITLLKDSSLLSVIAVPELMSVQKAITGQYSIFQEPLYTVALIYLVLTSVLGWVFLRLER 241

Query: 391 KIALKE 396
           +  +K 
Sbjct: 242 RYNVKH 247


>gi|159029917|emb|CAO90296.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 503

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 5/159 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + L Y   F  P  G F  IG +       +   ALS   AA++AEI+R G+ 
Sbjct: 335 GTPMLVQLFLIY---FGLP--GLFREIGLNIDLDRLPAALFALSLNVAAYLAEIMRGGIQ 389

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQ EA  +LG++  +    V+ PQA R ++PPL ++++ L+K++SLA  +GF +L 
Sbjct: 390 SIDNGQWEACSSLGMSPVQTMHEVIFPQAFRRMLPPLGNEFITLIKDTSLAAVIGFEELF 449

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             G  ++  T +A EI +    +YL L+ + +L   RL 
Sbjct: 450 RQGQLMVATTYKAFEIYIAVALVYLVLTTLSSLVFKRLE 488



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I GTLV    +S  K +  ICR+YV+ FR  P LV +F +Y
Sbjct: 306 IGGTLVAIALISPYKWLKIICRIYVDFFRGTPMLVQLFLIY 346


>gi|191638338|ref|YP_001987504.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus casei BL23]
 gi|227535173|ref|ZP_03965222.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239631577|ref|ZP_04674608.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|190712640|emb|CAQ66646.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus casei BL23]
 gi|227187218|gb|EEI67285.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239526042|gb|EEQ65043.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382365|gb|AEA53841.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus casei LC2W]
 gi|327385566|gb|AEA57040.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus casei BD-II]
          Length = 485

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 4/130 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  IA+S  +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+    V+LPQA+++I
Sbjct: 353 PALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNI 412

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379
            P L +++++L+K SS+   +G  DL+     +   T + ++ IL+ M +Y      LS 
Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSK 472

Query: 380 MIALFMNRLN 389
           +++ F  ++N
Sbjct: 473 LLSHFERKMN 482


>gi|312879705|ref|ZP_07739505.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Aminomonas paucivorans DSM 12260]
 gi|310782996|gb|EFQ23394.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Aminomonas paucivorans DSM 12260]
          Length = 512

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 95/180 (52%), Gaps = 26/180 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+  +    + +  LG +L++      R F  K   AL + YI    I G P L+    
Sbjct: 299 VTLKVSVTAMLLAMALGFLLAVI-----RVFGPKWASALAVAYIEA--IRGTPVLI---- 347

Query: 241 KYQLHFDKPVLGQFNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             QL F         F G    G  +SP F++  + L    AA+ AE  R+GL+AVPRGQ
Sbjct: 348 --QLFF--------IFYGLPNVGIKLSP-FLAGALGLGLNYAAYEAENYRAGLLAVPRGQ 396

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           MEAA+ L +T  +A R V++PQA R +IPP+T+ +++LLK+SSL   +   DL    G I
Sbjct: 397 MEAALGLSMTRWQALRHVVIPQAFRVVIPPVTNDFISLLKDSSLVSIITMVDLTKAYGQI 456


>gi|218233063|ref|YP_002365438.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|229171425|ref|ZP_04299010.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
 gi|218161020|gb|ACK61012.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|228612129|gb|EEK69366.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
          Length = 214

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S +LGIV+ +              + LPLL I  F  F LP      LK ++   
Sbjct: 47  KIPVVSQILGIVVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                               ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   +I + IIG+++G  R     +V+ I  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIVVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|296103389|ref|YP_003613535.1| glutamate/aspartate transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057848|gb|ADF62586.1| glutamate/aspartate transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 224

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMVLFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSWLKKR 222



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    +I   + GTL+   RLS+ K +AW    YV VFR+IP ++V+ + 
Sbjct: 16  LLDGLVITLKITAIAIIVGIVWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|42779788|ref|NP_977035.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42735705|gb|AAS39643.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 214

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   V+LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHVILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK+++LAV +   +L+     I  Q
Sbjct: 153 FISLLKDTALAVVISLPELIHNAQIISGQ 181



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGILVEVVRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|256965481|ref|ZP_05569652.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis HIP11704]
 gi|257415732|ref|ZP_05592726.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis AR01/DG]
 gi|307273809|ref|ZP_07555031.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|256955977|gb|EEU72609.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis HIP11704]
 gi|257157560|gb|EEU87520.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ARO1/DG]
 gi|306509494|gb|EFM78542.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|315174637|gb|EFU18654.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
          Length = 237

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%)

Query: 247 DKPVLGQF--NFIGGSTVSP--EFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299
           + P+L QF   + G   +SP   F    IA+ C   Y  A+I+E+VRSG+ AVPRGQ EA
Sbjct: 79  NTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGFYHGAYISEVVRSGIGAVPRGQFEA 138

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + GLT+ +  R V+LPQA R ++PPLT+Q +NL+KN+S    +  AD++    +  + 
Sbjct: 139 AYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I    +  F+Y  L   +A     L  K+  K KK
Sbjct: 199 NLNYIPAFALAGFLYFILCFPLA----NLARKMEEKNKK 233


>gi|163791315|ref|ZP_02185728.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Carnobacterium sp. AT7]
 gi|159873394|gb|EDP67485.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Carnobacterium sp. AT7]
          Length = 493

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 80/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   S  IA+S  +AA+I EI+RSGL +VP+GQ EAA +LG++ + A R ++ PQA+++I
Sbjct: 362 PALASGIIAVSLNSAAYICEIIRSGLNSVPKGQSEAARSLGMSKKIAMRQIIFPQALKNI 421

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ ++K SS+   +G +DL+     + + + + I  +++ M IY  L+  +  
Sbjct: 422 WPALGNEFITVIKESSIVSIIGVSDLIFQTRVVTSVSYRGIAPLVVTMIIYFILTFSLTK 481

Query: 384 FMNRLNAKI 392
            +N    K+
Sbjct: 482 LLNHYEGKM 490



 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 8/71 (11%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL+  V+ F+         +I+G ++   R+S NK+V ++   YVE  R  P ++ + F+
Sbjct: 300 ILISVVSVFF--------GSILGVVLSFMRMSKNKIVHFVATAYVEFVRGTPMMIQVMFI 351

Query: 149 YKSVLSVLPIP 159
           Y +V  ++ IP
Sbjct: 352 YFAVGYLVNIP 362


>gi|300311602|ref|YP_003775694.1| glutamine ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300074387|gb|ADJ63786.1| ABC-type glutamine transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 221

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 69/102 (67%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P ++   + L  Y+ A+++EIVR  + ++ RGQMEAA +LGL +R A R V+LPQA   +
Sbjct: 87  PAYVCGILGLGIYSGAYVSEIVRGAIQSIERGQMEAARSLGLPYRMAMRRVILPQAFVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           IPPL ++++ L+KNS+L   +  ADL+  G  II+ T +++E
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIADLMHEGEKIISVTYRSLE 188


>gi|300722325|ref|YP_003711610.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628827|emb|CBJ89405.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 224

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 79/134 (58%), Gaps = 4/134 (2%)

Query: 262 VSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           +SP+     +S  +A S + AA+ +EI+R+G+ +V RGQ  A++ALG+TH ++ RLV+LP
Sbjct: 89  ISPQTDIRLISAMVAFSLFEAAYYSEIIRAGIQSVSRGQSSASLALGMTHMQSMRLVILP 148

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R++ P L +Q + L +++SL   +  AD       I  + G  +E+IL    +Y   
Sbjct: 149 QAFRAMTPLLLTQGIVLFQDTSLVYVLSLADFFRTATNIGERDGTQVEMILFAGAVYFVF 208

Query: 378 SIMIALFMNRLNAK 391
           S   ++ +N L  +
Sbjct: 209 SFAASMLVNYLKKR 222



 Score = 40.0 bits (92), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 7/79 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    +I   I GT++   RLS+ K+V+W   +YV +FR++P ++V+ + 
Sbjct: 16  LLNGLVITLKITGIAVIVGIIWGTVLAMMRLSSIKVVSWFATLYVNLFRSVPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD 160
           Y       ++VL + P  D
Sbjct: 76  YLIVPNLLQNVLGISPQTD 94


>gi|294631351|ref|ZP_06709911.1| arginine/ornithine transporter [Streptomyces sp. e14]
 gi|292834684|gb|EFF93033.1| arginine/ornithine transporter [Streptomyces sp. e14]
          Length = 313

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 3/117 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI R+GL+AV  GQ EAA ALG++H K  R +++PQAMR I+PP  ++ +N+LK 
Sbjct: 167 AAYMAEICRAGLLAVDEGQTEAAHALGMSHGKTLRRIIIPQAMRVIVPPTGNEVINMLKT 226

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           +SL  AV + +L      I   +G  +E+  +   W  I  S+  +   ++ R  A+
Sbjct: 227 TSLVAAVQYPELFRFAQDIGTVSGAPVEMYFLAAAWYLILTSVLSVGQYYLERYYAR 283


>gi|269127883|ref|YP_003301253.1| polar amino acid ABC transporter inner membrane subunit
           [Thermomonospora curvata DSM 43183]
 gi|268312841|gb|ACY99215.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermomonospora curvata DSM 43183]
          Length = 303

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 71/104 (68%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEIVR+G+++V  GQ EAA ALG++  +  R ++LPQAMR I+PP  ++ +++LKN
Sbjct: 166 AAYMAEIVRAGILSVDPGQQEAASALGMSRMQTMRRIVLPQAMRVIVPPTGNETISMLKN 225

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +SL  AV +A+L     TI   T Q I ++++    YL LS ++
Sbjct: 226 TSLVAAVPYAELTFTAQTIYASTYQIIPMLIMACLWYLFLSTLL 269


>gi|330005623|ref|ZP_08305301.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|328536189|gb|EGF62570.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 253

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 94/173 (54%), Gaps = 11/173 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +L+ G+P ++++   Y   F  P+L   N  G       F ++   L  Y + +IAEIVR
Sbjct: 69  YLLRGIPLMMVVFWTY---FCVPLLIGHNISG-------FSTMLCTLVIYESTYIAEIVR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ A+P GQ EA+ ALG+ H +A RLV+LPQA+ + +P L SQ ++++K+S+L   +  
Sbjct: 119 GGIQALPSGQYEASRALGMGHVRALRLVILPQALYNALPSLVSQLVSIIKDSTLGYVINV 178

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L      + NQ   +  ++  I    Y  ++  +    NRL  +IA + ++
Sbjct: 179 PELTYAANQVSNQLLTKPFQVFAIVALSYYIINFSLTWLANRLELRIASRRQR 231


>gi|306843054|ref|ZP_07475678.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306286768|gb|EFM58316.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 323

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 74/128 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI R+G+ ++P GQ EAA ALGL   +   LV+LPQAMR IIPP  +Q
Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPHGQKEAATALGLGSAQTMWLVILPQAMRIIIPPTGNQ 255

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL   +G  +L+ V  T      + IE+++    IY  LSI      +R+  
Sbjct: 256 FIAMLKDSSLVSVIGVWELMYVARTQGQTEFRHIEMLITASMIYWILSISFEFIQSRIER 315

Query: 391 KIALKEKK 398
             A   K+
Sbjct: 316 YYARYNKR 323


>gi|317048575|ref|YP_004116223.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950192|gb|ADU69667.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 222

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   RLS HF       L   Y+S F   G P   LIA  + +++  P  
Sbjct: 32  FGLILGFVLALM--RLS-HFWPVNW--LARFYVSIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ +E +R  + A+ RGQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYASESLRGAIAAIERGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA R+ +PPL + +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   NRL A +  ++++
Sbjct: 194 VIYWVMATVLSALQNRLEAHVNRQDRE 220



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    I+G ++   RLS    V W+ R YV +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLILGFVLALMRLSHFWPVNWLARFYVSIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNN 173
           Y  +    + + PIP   I    G+ LN 
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNT 99


>gi|319778957|ref|YP_004129870.1| Glutamate Aspartate transport system permease protein GltK
           [Taylorella equigenitalis MCE9]
 gi|317108981|gb|ADU91727.1| Glutamate Aspartate transport system permease protein GltK
           [Taylorella equigenitalis MCE9]
          Length = 356

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+  LGI+L+L      R  H    +AL   YI   L+ G+P + L+       F   V
Sbjct: 161 MFATPLGIILAL-----GRRSHMPLIRALSTSYIE--LVRGVPFVSLL-------FMASV 206

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    F  G T + + +   +A+  Y +A+IAE+VR GL ++P+GQ E A +LGL++ + 
Sbjct: 207 MVPLFFPEGVTFN-KLLRAQLAVIIYMSAYIAEVVRGGLQSIPKGQYEGAKSLGLSYWQY 265

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL---VSVGGTIINQTGQAIEII 367
            RL++LPQA+  +IPPL S ++++ K++SL V +G  DL     V  +    +G  +E  
Sbjct: 266 MRLIILPQALTVVIPPLVSIFISIFKDTSLVVIIGIYDLTLSAKVALSDPQWSGLGLEAY 325

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   FIY      ++ +   + A++    + 
Sbjct: 326 VFLAFIYFIFCFAMSKYSRYIEARLRTGHRH 356


>gi|118474738|ref|YP_892387.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118413964|gb|ABK82384.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter fetus subsp. fetus 82-40]
          Length = 239

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 93/152 (61%), Gaps = 16/152 (10%)

Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           PVL Q   F F+  +T+S  F +  IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL
Sbjct: 90  PVLLQLMIFAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGL 149

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI- 364
           ++  + R ++ PQA+++I+P L +++++L K +S+   +G  DL     T+ +++ QA  
Sbjct: 150 SYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDL-----TMQSKSLQATL 204

Query: 365 ---EIILIWMFIYLS----LSIMIALFMNRLN 389
              E IL    IY +     S++  L  NRLN
Sbjct: 205 FSPEPILFAGVIYYANVKFFSLLAKLLENRLN 236


>gi|226942878|ref|YP_002797951.1| amino acid ABC transporter permease [Azotobacter vinelandii DJ]
 gi|226717805|gb|ACO76976.1| amino acid ABC transporter, permease protein [Azotobacter
           vinelandii DJ]
          Length = 221

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PLL +  +  F +P      L++    D PV               F S  +A   +
Sbjct: 61  RSIPLLLVIIWFYFAVP----FVLRWITGEDTPV-------------GAFASCLVAFVMF 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AAF  EIVR+G+ ++P GQM AA ALG+T+ ++ RLV+LPQA R + P L  Q + L +
Sbjct: 104 EAAFYCEIVRAGIQSIPHGQMSAAQALGMTYGQSMRLVILPQAFRKMTPLLLQQSIILFQ 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL  +VG  D ++   +  +  GQ  E ++    +Y  +S   +  + RL  ++
Sbjct: 164 DTSLVYSVGLMDFLNAARSHGDIIGQPHEFLIFAGLVYFVVSFAASQLVKRLQKRL 219



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 32/50 (64%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           + ++GTL+   RLS N L+A I   YV  FR+IP L+VI + Y +V  VL
Sbjct: 31  SVLLGTLLAILRLSHNPLLAGIASAYVNYFRSIPLLLVIIWFYFAVPFVL 80


>gi|306846379|ref|ZP_07478926.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306273164|gb|EFM55064.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
          Length = 323

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 74/128 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI R+G+ ++P GQ EAA ALGL   +   LV+LPQAMR IIPP  +Q
Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPHGQKEAATALGLGSAQTMWLVILPQAMRIIIPPTGNQ 255

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL   +G  +L+ V  T      + IE+++    IY  LSI      +R+  
Sbjct: 256 FIAMLKDSSLVSVIGVWELMYVARTQGQTEFRHIEMLITASMIYWILSISFEFIQSRIER 315

Query: 391 KIALKEKK 398
             A   K+
Sbjct: 316 YYARYNKR 323


>gi|260462684|ref|ZP_05810890.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259031590|gb|EEW32860.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 314

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 8/158 (5%)

Query: 231 GLPTLV-------LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           G+P L+       L  L  ++    P LG    +  +     F S  +ALS   A ++AE
Sbjct: 120 GVPALIQLIFWFNLSLLVREISLTLPFLGTLFAVRTNDFMTPFFSAVVALSLCEAGYMAE 179

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR+G+ +VP GQ EAA ALG+ +R   + + LPQAMR ++PP  ++ +NLLK +SL   
Sbjct: 180 IVRAGIKSVPSGQSEAASALGMPYRMILKRITLPQAMRFVLPPTGNEAINLLKMTSLVTF 239

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLS-LSIM 380
           +   DL     +I  +T + I ++++  F YL+ +SIM
Sbjct: 240 IAVDDLFYTAQSIYARTFETIPLLIVVAFWYLAVVSIM 277



 Score = 36.2 bits (82), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           +I+ G  NT  L    M+ A ++GT++   R+S + ++     VYV  FR +P L+ + F
Sbjct: 70  SIMRGLGNTLMLTVIIMVLAIVVGTVIAIMRVSPSPVLRAFAGVYVWFFRGVPALIQLIF 129

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
            +   LS+L + + S+ LPF
Sbjct: 130 WFN--LSLL-VREISLTLPF 146


>gi|229159722|ref|ZP_04287731.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus R309803]
 gi|228623747|gb|EEK80564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus R309803]
          Length = 214

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|241765821|ref|ZP_04763760.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241364269|gb|EER59431.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 260

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/147 (41%), Positives = 84/147 (57%), Gaps = 12/147 (8%)

Query: 221 LLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           L +++ F I+   G P LV I   Y   F  PVL     + G  + P+F +  +AL    
Sbjct: 88  LRWLAGFYIWAIRGTPLLVQILFVY---FALPVL-----VPGLNL-PDFAAAVVALGLNV 138

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE +R+GL+AVPRGQ EAA ALGL        V+ PQA +  +PPL S ++ LLK+
Sbjct: 139 GAYNAEAIRAGLLAVPRGQTEAARALGLGRGHVFFDVVFPQAFKISLPPLVSNFVALLKD 198

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAI 364
           SSLA A+G  +L +VG  I + T Q I
Sbjct: 199 SSLAYAIGVVELTNVGNRIQSATFQPI 225


>gi|222085817|ref|YP_002544347.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723265|gb|ACM26421.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 293

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 10/200 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   VF   LG VL++ AT           KA+  +++  F   G+P +V I  
Sbjct: 69  LTLELMAGAMVFGTALGCVLAVMATS-----QNLVLKAMAAVFVWWFR--GVPLIVQIFF 121

Query: 241 KYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +    P   +G F       V+P     ++AL  + AA ++EI+R GL++V RGQ +
Sbjct: 122 WFNIALFIPQVGIGSFTISINDLVTPSLAG-FLALGLHEAANMSEIIRGGLMSVDRGQRD 180

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL   +  R V+LPQA R IIPP  +Q + +LK S++   +G  DL++    I  
Sbjct: 181 AAAALGLRPVQRLRAVILPQAARLIIPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYA 240

Query: 359 QTGQAIEIILIWMFIYLSLS 378
           +    IE++ +    YL+++
Sbjct: 241 RNFLIIELLFVASIWYLTIT 260


>gi|120603331|ref|YP_967731.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120563560|gb|ABM29304.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 278

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 10/152 (6%)

Query: 247 DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + P+L Q  F+    ++P F      S  +AL  +  A++AEI+R+G+ AVP+GQ EA+ 
Sbjct: 125 NTPLLVQL-FVTYFAIAPVFGLGRMASAVMALGVFEGAYMAEILRAGIAAVPQGQWEASR 183

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+        V+LPQA+R  +PPLT Q ++L+K+SSLA A+   +L     TII +T 
Sbjct: 184 SLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHELTMQAQTIIAETF 243

Query: 362 QAIEIIL----IWMFIYLSLSIMIALFMNRLN 389
              E+ L    I++ + LSLS +  L   R++
Sbjct: 244 LTFEVWLLTAAIYLCVTLSLSAVARLLERRMH 275


>gi|330898557|gb|EGH29976.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 221

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 23/220 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T+   A   V   VLG +L+L     ++      G      +++PLL + T+    +P 
Sbjct: 19  MTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                L++    D P+               F S  +A   + AA+  EIVR+G+ ++ +
Sbjct: 78  ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   
Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 182 SSGDIIGRANEFLIIAGLVYFTISFAASLVVKRLQKRFAV 221



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 40/65 (61%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   ++GTL+   RLS+NKL+A +   YV  FR+IP L+VI + Y +
Sbjct: 16  GMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75

Query: 152 VLSVL 156
           V  VL
Sbjct: 76  VPFVL 80


>gi|315659420|ref|ZP_07912283.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus lugdunensis M23590]
 gi|315495539|gb|EFU83871.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus lugdunensis M23590]
          Length = 239

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 120/209 (57%), Gaps = 14/209 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++L+LF T L R    +  +A+  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITIVTFILGLILALF-TALMRISTSRILRAIARIYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           P LG+   I G      T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++
Sbjct: 88  PELGRL--ITGDADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSI 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+R+  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + 
Sbjct: 145 GMTYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEY 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I ++   +Y  +  +I++      +KI
Sbjct: 205 FTIYILVAIMYWVVCFIISVLQGLYESKI 233


>gi|168492769|ref|ZP_02716912.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|183577030|gb|EDT97558.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
          Length = 225

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL+ LPQA   I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLITLPQAFCII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A 
Sbjct: 151 LPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH I++P
Sbjct: 80  ----LPLISDHIIMIP 91


>gi|26986969|ref|NP_742394.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148545497|ref|YP_001265599.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24981583|gb|AAN65858.1|AE016214_3 cysteine ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
 gi|148509555|gb|ABQ76415.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|313496589|gb|ADR57955.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 222

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 28/212 (13%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHF 246
           F  VLG  L+L   RLS        K LPL     +Y+S F   G P LV +   + ++F
Sbjct: 33  FGLVLGFALALM--RLS--------KILPLNWLARVYVSFFR--GTPLLVQL---FVIYF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G         + P   SL I LS   AA+I EI+R+ + ++ RGQ EAA ++G+T
Sbjct: 78  GMPQIG-------IELDPIPASL-IGLSLNMAAYICEILRAAISSIDRGQWEAAASIGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R  +LPQA+R+ +PPL + +++L+K+++LA  +   +L      I  +T +   +
Sbjct: 130 RVQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFTM 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +    IY  L  ++A F NR+ A++   +++
Sbjct: 190 YVAVAVIYWVLCSILAHFQNRMEARVNQHDQE 221


>gi|307130004|ref|YP_003882020.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306527533|gb|ADM97463.1| Amino acid ABC transporter, permease protein [Dickeya dadantii
           3937]
          Length = 281

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 75/124 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IALS    A++AE +RSG++AVPRGQ EAA+ALGL+       V+ PQA+R IIP
Sbjct: 142 FTSGIIALSLNYGAYLAETIRSGVLAVPRGQKEAAMALGLSRWVIITHVVAPQALRIIIP 201

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  SQ+++++K+SSL   +G  +L  +  +    T   +E++     IY  LSI + L  
Sbjct: 202 PAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRSTYHYMEMLTTAAVIYWLLSIGLELLQ 261

Query: 386 NRLN 389
            RL 
Sbjct: 262 GRLE 265


>gi|295099754|emb|CBK88843.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Eubacterium cylindroides
           T2-87]
          Length = 238

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 110/204 (53%), Gaps = 10/204 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + +LG +L L A  + R  H K   A+   Y  T +I G P L+ +   Y   +  P++G
Sbjct: 37  TVILGCILGLLAILMKRS-HIKVLNAISTAY--TQVIRGTPMLLQL---YIWLYGFPMIG 90

Query: 253 ----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                   +G    S EF++  +AL+  + A+I E++R GL ++ +GQMEA  +LG ++ 
Sbjct: 91  ISIPSIPMLGSVYGSREFLTAVVALAINSGAYICELLRGGLDSIDKGQMEAGRSLGFSNL 150

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R +++PQA+R ++P L ++++ ++K SS+   VG  D++     +   T    E ++
Sbjct: 151 ETMRYIIVPQAIRVVLPGLCNEFIMMIKESSIVSVVGVFDIMYTSNIVKASTYSVFEPLI 210

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
           I   IY +L+ ++   M+ +  K+
Sbjct: 211 IIAIIYFALTSVLTTIMSLIERKL 234


>gi|261822750|ref|YP_003260856.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261606763|gb|ACX89249.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 254

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ +  R V+LPQA R ++P
Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMEMRFGKSDSR 254


>gi|296535859|ref|ZP_06898018.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296263809|gb|EFH10275.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 220

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS Y  AF +EIVR G+ ++  GQ EAA+ALG+T  ++ R ++LPQAM+ ++PPL +Q
Sbjct: 95  LALSLYGGAFYSEIVRGGIASIESGQSEAALALGMTPAQSMRRIVLPQAMKRMVPPLMNQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  LKN+SL   +   DL+  G    + + + +EI  +   IY  +   + L + RL  
Sbjct: 155 SIIQLKNTSLVSVLAVPDLLYQGQAAAHDSYRPLEIYTVVAIIYFVVLFPLTLLVGRLER 214

Query: 391 KIALKE 396
           ++A  +
Sbjct: 215 RLARSD 220


>gi|229056417|ref|ZP_04195830.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
 gi|228720891|gb|EEL72440.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
          Length = 214

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|307704889|ref|ZP_07641780.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|307621503|gb|EFO00549.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 227

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 119/210 (56%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+         F +++ K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 83  I-QVGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 138 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +     ++   +KK
Sbjct: 198 FAAFYYLIMTSILTVALKAFEKRMGQGDKK 227


>gi|300784268|ref|YP_003764559.1| amino acid ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299793782|gb|ADJ44157.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 215

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 30/171 (17%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  +  F +F  P L ++ L Y                       F +  +AL+ YT+A
Sbjct: 62  PLTLVFAFFVFAYPLLDIVKLDY-----------------------FPAAVVALTVYTSA 98

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FI E+VRSG+  VP GQ EA  ALGLT  +    V+LPQA+RS++PPL S  + LLKN++
Sbjct: 99  FICEVVRSGINTVPVGQAEAGRALGLTFGQILGQVVLPQALRSVVPPLISTLIALLKNTT 158

Query: 340 LAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +A GF+  V+  G I   +++ G++  + L+W+ +   + + +  F+ R
Sbjct: 159 --IAAGFS--VAEAGAIRAYLSERGESQLVGLLWVALGFIILVAVLSFVQR 205


>gi|229588677|ref|YP_002870796.1| glutamate/aspartate ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229360543|emb|CAY47400.1| glutamate/aspartate ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 223

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 23/205 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LG +L+L     S+      G      +++PLL + T+    +P      L++    D P
Sbjct: 36  LGTILALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDTP 91

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +               F S  +A   + AA+  EIVR+G+ ++P+GQM AA A+G+T+ +
Sbjct: 92  I-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSIPKGQMAAAQAMGMTYGQ 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G++ E ++ 
Sbjct: 139 TMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSNEFLIF 198

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
              +Y  +S   +L + RL  + A+
Sbjct: 199 AGVVYFIISFSASLLVKRLQKRFAV 223



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++    +GT++   RLS++KL++ +   YV  FR+IP L+VI + Y +
Sbjct: 18  GMVMTLQLMVMGVVGGIALGTILALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWFYLA 77

Query: 152 VLSVL 156
           V  VL
Sbjct: 78  VPFVL 82


>gi|260777100|ref|ZP_05885994.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260606766|gb|EEX33040.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 265

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 23/238 (9%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +PD+      G +     L    +T+  +A   +F+ ++G++ +L   +LS+      G+
Sbjct: 43  VPDYIAFYEDGEWWPAELLEGLWVTIKISAWSLLFTLLIGMLTALL--KLSQSV---VGR 97

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +   YI   LI   P LV I L Y +    PV+G             F +  +ALS + 
Sbjct: 98  TIANTYIE--LIRNTPLLVQIYLLYFVF--GPVIGL----------DRFATAILALSLFQ 143

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI R GL ++P+GQ EAA +LGL+       V+ PQ ++  +PPLT++ ++L+KN
Sbjct: 144 GAYTAEIFRGGLNSIPKGQFEAARSLGLSPFSTYYDVIFPQLLQRTLPPLTNEVVSLVKN 203

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNRLNAK 391
           SS+   +   DL + G  I+++T    EI      I++ + LSLS + A   ++L A+
Sbjct: 204 SSIVSVMAIFDLTTEGRNIVSETAMPFEIWFSVAAIYLLLTLSLSGISAWLEHKLGAQ 261


>gi|27378208|ref|NP_769737.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351355|dbj|BAC48362.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 264

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 101/191 (52%), Gaps = 12/191 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F +GIV+ +      R    +   AL  LY+  F    +P L  + L Y +  +   + 
Sbjct: 37  AFAIGIVVGI-----GRTVQNRAIAALARLYVEIFR--NIPVLAQMFLWYFVLPEILPVT 89

Query: 253 QFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             N I    + P + S   AL C   YTAA IAE VR+G+ A+PRGQ EAA ALGLT   
Sbjct: 90  LGNAI--KQIPPPWGSFVPALLCLGLYTAARIAEQVRAGIEALPRGQTEAASALGLTAYL 147

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA+R I+P LTS+ + + KN+S+A+ +G  +L +    I   T Q       
Sbjct: 148 TYRHIIVPQALRLIVPSLTSEVMGIYKNTSVALTIGLMELTAQARQISEATFQTFTAFGA 207

Query: 370 WMFIYLSLSIM 380
              IYL+L+++
Sbjct: 208 ATLIYLALALI 218



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 5/97 (5%)

Query: 80  TSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           T+D   Y   +L G   T  LAF G   A  IG +VG GR   N+ +A + R+YVE+FRN
Sbjct: 9   TADGQRYIDWLLSGLGWTLALAFFGWWIAFAIGIVVGIGRTVQNRAIAALARLYVEIFRN 68

Query: 139 IPPLVVIFFLYKSVLSVLPI----PDHSIVLPFGMFL 171
           IP L  +F  Y  +  +LP+        I  P+G F+
Sbjct: 69  IPVLAQMFLWYFVLPEILPVTLGNAIKQIPPPWGSFV 105


>gi|29375694|ref|NP_814848.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227518373|ref|ZP_03948422.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227552902|ref|ZP_03982951.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229546203|ref|ZP_04434928.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229550388|ref|ZP_04439113.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|256618702|ref|ZP_05475548.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ATCC 4200]
 gi|256852768|ref|ZP_05558138.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256958615|ref|ZP_05562786.1| amino acid ABC transporter permease [Enterococcus faecalis DS5]
 gi|256962286|ref|ZP_05566457.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis Merz96]
 gi|257078031|ref|ZP_05572392.1| amino acid ABC transporter permease [Enterococcus faecalis JH1]
 gi|257082919|ref|ZP_05577280.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis E1Sol]
 gi|257085621|ref|ZP_05579982.1| amino acid ABC transporter permease [Enterococcus faecalis Fly1]
 gi|257086473|ref|ZP_05580834.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis D6]
 gi|257089530|ref|ZP_05583891.1| ABC polar amino acid transporter permease [Enterococcus faecalis
           CH188]
 gi|257418947|ref|ZP_05595941.1| ABC amino acid transporter permease [Enterococcus faecalis T11]
 gi|257422965|ref|ZP_05599955.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293383315|ref|ZP_06629230.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|293387528|ref|ZP_06632077.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294780989|ref|ZP_06746341.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300860018|ref|ZP_07106106.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307268768|ref|ZP_07550136.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307274580|ref|ZP_07555760.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307278846|ref|ZP_07559909.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307288577|ref|ZP_07568561.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|307291101|ref|ZP_07570986.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312899593|ref|ZP_07758919.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312903651|ref|ZP_07762827.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312905822|ref|ZP_07764842.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312909123|ref|ZP_07767982.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312951370|ref|ZP_07770268.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|29343155|gb|AAO80918.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227074051|gb|EEI12014.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227177974|gb|EEI58946.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229304510|gb|EEN70506.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229308727|gb|EEN74714.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|256598229|gb|EEU17405.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ATCC 4200]
 gi|256711227|gb|EEU26265.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256949111|gb|EEU65743.1| amino acid ABC transporter permease [Enterococcus faecalis DS5]
 gi|256952782|gb|EEU69414.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis Merz96]
 gi|256986061|gb|EEU73363.1| amino acid ABC transporter permease [Enterococcus faecalis JH1]
 gi|256990949|gb|EEU78251.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis E1Sol]
 gi|256993651|gb|EEU80953.1| amino acid ABC transporter permease [Enterococcus faecalis Fly1]
 gi|256994503|gb|EEU81805.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis D6]
 gi|256998342|gb|EEU84862.1| ABC polar amino acid transporter permease [Enterococcus faecalis
           CH188]
 gi|257160775|gb|EEU90735.1| ABC amino acid transporter permease [Enterococcus faecalis T11]
 gi|257164789|gb|EEU94749.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291079338|gb|EFE16702.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|291083038|gb|EFE20001.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294451935|gb|EFG20385.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295112702|emb|CBL31339.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Enterococcus sp. 7L76]
 gi|300850836|gb|EFK78585.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306497755|gb|EFM67287.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306500484|gb|EFM69817.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504517|gb|EFM73724.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306508732|gb|EFM77822.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306514896|gb|EFM83443.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310628161|gb|EFQ11444.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630630|gb|EFQ13913.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310633004|gb|EFQ16287.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311290547|gb|EFQ69103.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311293272|gb|EFQ71828.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315028075|gb|EFT40007.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315030716|gb|EFT42648.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315031596|gb|EFT43528.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034962|gb|EFT46894.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315144631|gb|EFT88647.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315148455|gb|EFT92471.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315150402|gb|EFT94418.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153641|gb|EFT97657.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315156541|gb|EFU00558.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315158367|gb|EFU02384.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315160938|gb|EFU04955.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315165529|gb|EFU09546.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315168386|gb|EFU12403.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315170969|gb|EFU14986.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315573710|gb|EFU85901.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315577479|gb|EFU89670.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|315582675|gb|EFU94866.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|323480357|gb|ADX79796.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           62]
 gi|329576391|gb|EGG57904.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 237

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%)

Query: 247 DKPVLGQF--NFIGGSTVSP--EFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299
           + P+L QF   + G   +SP   F    IA+ C   Y  A+I+E+VRSG+ AVPRGQ EA
Sbjct: 79  NTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGLYHGAYISEVVRSGIGAVPRGQFEA 138

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + GLT+ +  R V+LPQA R ++PPLT+Q +NL+KN+S    +  AD++    +  + 
Sbjct: 139 AYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I    +  F+Y  L   +A     L  K+  K KK
Sbjct: 199 NLNYIPAFALAGFLYFILCFPLA----NLARKMEEKNKK 233


>gi|324324681|gb|ADY19941.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 214

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYMKIPIVSQILGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|256762126|ref|ZP_05502706.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256683377|gb|EEU23072.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
          Length = 235

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%)

Query: 247 DKPVLGQF--NFIGGSTVSP--EFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299
           + P+L QF   + G   +SP   F    IA+ C   Y  A+I+E+VRSG+ AVPRGQ EA
Sbjct: 77  NTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGFYHGAYISEVVRSGIGAVPRGQFEA 136

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + GLT+ +  R V+LPQA R ++PPLT+Q +NL+KN+S    +  AD++    +  + 
Sbjct: 137 AYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSV 196

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I    +  F+Y  L   +A     L  K+  K KK
Sbjct: 197 NLNYIPAFALAGFLYFILCFPLA----NLARKMEEKNKK 231


>gi|228912174|ref|ZP_04075889.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
 gi|228847511|gb|EEM92450.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
          Length = 193

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 110/202 (54%), Gaps = 15/202 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SFV+GI L++     +++ +     ++  +YIS F   G P LV +   + L+F  P 
Sbjct: 2   IISFVIGIGLAIITKNKTKYLY-----SIARVYISFFR--GTPLLVQL---FVLYFGLP- 50

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                     TV     +  I LS   AA+++EI+R  L AV  GQM+A +++G+T  +A
Sbjct: 51  ----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTKAQA 106

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++ PQA+R  +P L + ++ LLK SSL+ A+G A++++    +  Q+ + +E  L  
Sbjct: 107 MRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSYRYMESYLAV 166

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             +Y  ++I+I+    +L  K+
Sbjct: 167 AIVYWIITIVISWGQKKLEKKL 188


>gi|237731335|ref|ZP_04561816.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
 gi|226906874|gb|EEH92792.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
          Length = 261

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 74/132 (56%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L  +T+AF+ E + SGL AV  GQ EAA+A G +     R +LLPQ + 
Sbjct: 109 LTPEFICSAWGLGVFTSAFLVEEIASGLQAVSAGQREAAVAQGFSSWAIFRHILLPQGLA 168

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL   I++
Sbjct: 169 NAWQPIVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTVLYLFTGIIL 228

Query: 382 ALFMNRLNAKIA 393
            + + RL  + A
Sbjct: 229 GMLLTRLGPQSA 240



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ GF+ T W+  +G++ AT+I   +   RL+ N+L   +  V+V VFRN P LV + F 
Sbjct: 18  IISGFLTTLWVTLAGIVLATLIAISLLGLRLTGNRLAKAMVGVWVSVFRNTPLLVQLMFW 77

Query: 149 YKSVLSVLP 157
           Y +  + LP
Sbjct: 78  YFAAWNWLP 86


>gi|302531216|ref|ZP_07283558.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
 gi|302440111|gb|EFL11927.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
          Length = 319

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 80/130 (61%), Gaps = 3/130 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F++  + L    AA++AEIVR G+ +V  GQ+EAA ALG++  K  R ++LPQAMR II
Sbjct: 157 QFVASLLGLGLNEAAYMAEIVRGGIQSVDSGQLEAASALGMSRGKTLRRIILPQAMRVII 216

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381
           PP  ++ +++LK +SL V +G+ +L     TI +Q  + + ++++   W     S+  ++
Sbjct: 217 PPTGNETISMLKTTSLVVVIGYFELFVSAQTIYSQNYKTVPLLIVAATWYLFMTSVLTVV 276

Query: 382 ALFMNRLNAK 391
             ++ R  A+
Sbjct: 277 QFYIERYFAR 286


>gi|311232933|gb|ADP85787.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 278

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 10/152 (6%)

Query: 247 DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + P+L Q  F+    ++P F      S  +AL  +  A++AEI+R+G+ AVP+GQ EA+ 
Sbjct: 125 NTPLLVQL-FVTYFAIAPVFGLGRMASAVMALGVFEGAYMAEILRAGIAAVPQGQWEASR 183

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+        V+LPQA+R  +PPLT Q ++L+K+SSLA A+   +L     TII +T 
Sbjct: 184 SLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHELTMQAQTIIAETF 243

Query: 362 QAIEIIL----IWMFIYLSLSIMIALFMNRLN 389
              E+ L    I++ + LSLS +  L   R++
Sbjct: 244 LTFEVWLLTAAIYLCVTLSLSAVARLLERRMH 275


>gi|206900671|ref|YP_002250772.1| glutamine ABC transporter, permease protein [Dictyoglomus
           thermophilum H-6-12]
 gi|206739774|gb|ACI18832.1| glutamine ABC transporter, permease protein [Dictyoglomus
           thermophilum H-6-12]
          Length = 218

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 70/109 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS  +AA+  EI RSG+ ++ +GQMEAA +LG+T+ +A R V+LPQA R I+PPLT++
Sbjct: 93  VGLSLNSAAYTGEIFRSGIQSIEKGQMEAARSLGMTYFQAMRYVILPQAFRRILPPLTNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           ++++LK SSLA  +   +L+  G  I+          L    IYL +++
Sbjct: 153 FVSMLKESSLASTLAVTELLRAGREIVAWKANVFSPFLGVTLIYLLMTL 201


>gi|163791026|ref|ZP_02185447.1| putative ABC-type amino-acid transporter permease protein
           [Carnobacterium sp. AT7]
 gi|159873671|gb|EDP67754.1| putative ABC-type amino-acid transporter permease protein
           [Carnobacterium sp. AT7]
          Length = 236

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 61/86 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EFM   I +  Y  A+I E+VR+G++++P+GQ EAA + G  + +  R V+LPQ ++SI+
Sbjct: 94  EFMIGVIGVGLYHGAYIGEVVRAGILSIPKGQQEAAYSQGFNYTQTMRYVILPQMVKSIL 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350
           PPLT+Q +NL+KN+S+   +  ADL+
Sbjct: 154 PPLTNQAVNLIKNTSVLAIIAGADLM 179



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  +A   +  + +IG ++G    + N ++  I RVYVE+F+NIP ++ IFF+Y  
Sbjct: 25  GFLRTLQVAILALALSLVIGVIIGILSTAQNVILRSIARVYVEIFQNIPLVIQIFFMYNG 84

Query: 152 V 152
           +
Sbjct: 85  L 85


>gi|237785943|ref|YP_002906648.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758855|gb|ACR18105.1| ABC-type transport system, permease protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 310

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV------LIALKY-Q 243
           V +  +GIVL++ A  + R       +++   YI  F+  G+P         L+A+ Y +
Sbjct: 73  VLAMAIGIVLAVTAA-IMRQSENPVLRSVAWAYI--FVFRGIPVYTQLVFWGLLAVLYPK 129

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P   +F     S +   F +  + L     A++AEIVRSGL +V  GQ EAA AL
Sbjct: 130 LSMGVPFGPEFFKFDTSDIITAFWAATLGLGFNEGAYLAEIVRSGLESVDEGQHEAARAL 189

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQ 362
           G+ H    R +++PQAMR IIPPL ++ + +LK +SL +AV F  DL      I N+   
Sbjct: 190 GMKHSTVLRRIIIPQAMRVIIPPLGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRLYA 249

Query: 363 AIEIILI---WMFIYLSLSIMIALFMNR 387
            I ++++   W  +  S+ ++   F+ R
Sbjct: 250 PIPLLIVAALWYLVVTSVLMVGQYFLER 277


>gi|229074426|ref|ZP_04207458.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-18]
 gi|228708710|gb|EEL60851.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-18]
          Length = 214

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ I    VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|170757509|ref|YP_001781580.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|169122721|gb|ACA46557.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
          Length = 228

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 103/182 (56%), Gaps = 14/182 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L     + +GLPT   I +++    + P+LG  NF       P+F +  +ALS  
Sbjct: 61  RGTPVLVQLYIIYYGLPT---IGIRFP---EVPILGS-NF-------PDFFAGILALSIN 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AEI+R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++ ++K
Sbjct: 107 SGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            SS+   +G  +L+    T+     +  E +L+   +Y  L+  ++  +     ++ + +
Sbjct: 167 ESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSD 226

Query: 397 KK 398
           + 
Sbjct: 227 RN 228


>gi|78355214|ref|YP_386663.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217619|gb|ABB36968.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 251

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 111/214 (51%), Gaps = 37/214 (17%)

Query: 190 FVFSFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
            VF F++G ++ L   R+SR+         + +  +  PL+    FL FGLP ++ I + 
Sbjct: 60  LVFGFIIGTLVGL--GRISRNRLCNAVAVSYVEAIRGTPLIVQVMFLYFGLPLVLGIRI- 116

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                                 P   +  +A++  + A+IAEIVR  + ++  GQMEA  
Sbjct: 117 ----------------------PPVTAGVVAIAVNSGAYIAEIVRGSIQSINTGQMEAGR 154

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ++GLTH +    ++ PQA + +IPPL +Q++  LK++SL V +G  +L   G  II    
Sbjct: 155 SIGLTHLQTMLYIIWPQAFKRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNF 214

Query: 362 QAIEIIL----IWMFIYLSLSIMIALFMNRLNAK 391
           +A E+ L    +++ + L+LS ++ ++  +LNA+
Sbjct: 215 RAFEVWLTVAIMYLCMTLTLSQVLRMYERKLNAR 248



 Score = 43.1 bits (100), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 29/47 (61%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G++   IIGTLVG GR+S N+L   +   YVE  R  P +V + FLY
Sbjct: 59  GLVFGFIIGTLVGLGRISRNRLCNAVAVSYVEAIRGTPLIVQVMFLY 105


>gi|300693654|ref|YP_003749627.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
 gi|299075691|emb|CBJ34988.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
          Length = 233

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 14/151 (9%)

Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290
           H + P L Q  F + G ST+ P            E +   +ALS   AA+ +E +RSGL 
Sbjct: 66  HCNVPTLVQLMFWYFGISTLFPLPVLDWLGEHHSEALFAIVALSLCQAAYFSEDLRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA ALG +   A R VL+PQA+R+ +P L +  ++L KNSSLA+A+G A++ 
Sbjct: 126 AIPPGQEEAARALGNSFIGAMRHVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVAEMT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                I N + +A E  L+   +YL  S++I
Sbjct: 186 HAVKEIENASFRAFESYLLATVMYLGFSLVI 216


>gi|282864977|ref|ZP_06274031.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282560402|gb|EFB65950.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 214

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 5/111 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VP GQ EAA +LG++  +    V+LPQA RS+IPP+ S 
Sbjct: 89  LALGCYTSAFICEALRSGINTVPTGQGEAARSLGMSFSQTLSNVVLPQAFRSVIPPVGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + L KNS++A A    +L+    T +N+ G +I    IW F+++++  +I
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSI----IWSFVWIAVGYLI 194


>gi|313885720|ref|ZP_07819469.1| putative glutamine ABC transporter, permease protein GlnM
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619085|gb|EFR30525.1| putative glutamine ABC transporter, permease protein GlnM
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 216

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 117/216 (54%), Gaps = 23/216 (10%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A   + SFV+GI +++  T      H K    +  +YI  F    +P LV++   
Sbjct: 19  TLLASAIALIASFVIGISMAVGQTS-----HNKLLSTITTIYIEVFR--NIPLLVIVMFF 71

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +    P+ G     G       + +  I LS YT++F+A++V+SG+ ++P+GQ EA  
Sbjct: 72  YVV---VPLYG-IKVTG-------YQAGIIGLSLYTSSFVADVVKSGITSIPKGQKEAGF 120

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT- 360
           A GL+  + T  ++LPQA+  ++P L +Q +NL+KNSS+   V   D++  G  I +Q+ 
Sbjct: 121 ASGLSQSQVTFHIVLPQAINLVLPTLGNQIINLVKNSSILAMVAGLDIMYQGDLIASQSF 180

Query: 361 ---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 I + L ++ I + LS+M+  + N+  AK+A
Sbjct: 181 NVFSTYIIVGLFYLLITIPLSLMVKHWENQ-QAKMA 215



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +++   L GF +T   +   +I + +IG  +  G+ S NKL++ I  +Y+EVFRNIP L
Sbjct: 6   QNFSDQFLAGFGHTLLASAIALIASFVIGISMAVGQTSHNKLLSTITTIYIEVFRNIPLL 65

Query: 143 VVIFFLY 149
           V++ F Y
Sbjct: 66  VIVMFFY 72


>gi|260463005|ref|ZP_05811208.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259031126|gb|EEW32399.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 255

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 30/178 (16%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           T+  +A  FV + ++GIVL           R+    +    +A PLL    FL FGLP L
Sbjct: 56  TVWLSALSFVGALIVGIVLCAMGLQRGWLFRVPAKAYIDAVRATPLLAQLYFLYFGLPRL 115

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                                     V PE +   +ALS  + A++AEI+R+G++++PRG
Sbjct: 116 ------------------------GFVLPELVVGILALSLNSGAYVAEIIRAGILSIPRG 151

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           Q+EA++A G+T+ +  RLV+LPQA +  IPPL  Q + L+K+S+L   +  A+L   G
Sbjct: 152 QVEASVASGMTYVQRMRLVVLPQAFKVTIPPLLGQAIVLVKDSALLSLISVAELTRAG 209


>gi|228906389|ref|ZP_04070273.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
 gi|228853301|gb|EEM98074.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
          Length = 214

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|20089671|ref|NP_615746.1| glutamine ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
 gi|19914598|gb|AAM04226.1| glutamine ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
          Length = 213

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 80/124 (64%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  + A+ AEI+R+G+ +V RGQMEAA +LG+T  +A + V++PQA+R IIPPL ++++ 
Sbjct: 88  SINSGAYNAEIIRAGIKSVDRGQMEAARSLGMTEGQAMKEVVMPQAVRLIIPPLGNEFIA 147

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK+SSL   +   +L   G   +++T  A    +   F+YL+L++ I+  +  +  ++ 
Sbjct: 148 LLKDSSLLAIISVHELAKNGMLYVSKTFAAFPTYISVAFVYLALTMGISHILGYIERRLG 207

Query: 394 LKEK 397
           + ++
Sbjct: 208 VSDR 211


>gi|50122459|ref|YP_051626.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043]
 gi|49612985|emb|CAG76436.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043]
          Length = 254

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ +  R V+LPQA R ++P
Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMEMRFGKSDSR 254


>gi|18309583|ref|NP_561517.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|18144260|dbj|BAB80307.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
          Length = 223

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 109/196 (55%), Gaps = 16/196 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A   +   +LG +L          F  K  + +   Y+   +I G P L+ I   
Sbjct: 23  TLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTAYVE--VIRGTPLLLQI--- 77

Query: 242 YQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           Y ++F  P  G Q   +         +S  IA+S  +AA+++EI+R+G+ AV +GQ+EAA
Sbjct: 78  YIVYFGLPSFGIQLEVL---------LSCIIAISLNSAAYVSEIIRAGIDAVDKGQLEAA 128

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG+T   A RL++LPQA+++I+P + ++++ ++K SS+A  +G A+L+     +   T
Sbjct: 129 RSLGMTEGMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTIGVAELMYSSKIVTGAT 188

Query: 361 GQAIE-IILIWMFIYL 375
            +  E +I+I MF ++
Sbjct: 189 YKGFEPLIVIAMFYFV 204


>gi|229095294|ref|ZP_04226286.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-29]
 gi|229101402|ref|ZP_04232146.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-28]
 gi|229114243|ref|ZP_04243664.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-3]
 gi|228669263|gb|EEL24684.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-3]
 gi|228682107|gb|EEL36240.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-28]
 gi|228688153|gb|EEL42039.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-29]
          Length = 214

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ I  V VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQILGVIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|296138522|ref|YP_003645765.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296026656|gb|ADG77426.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 483

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 16/164 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           T+ T   +   SFV+G+ ++L    L+R    +  + L   YIS  +I G P LV L+ +
Sbjct: 281 TVTTTIPLTAISFVIGLAIAL-GVALARMSKRRAVRGLARAYIS--IIRGTPLLVQLVII 337

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L            + G  + P F++  +A S     + AEI+R+ + AVPRGQ EAA
Sbjct: 338 FYGLP-----------LAGVVIDP-FLAAAVAFSLNVGGYAAEIIRAAIGAVPRGQWEAA 385

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
             +G+ +R A R ++LPQA R+  PPL +  ++LLK++SLA A+
Sbjct: 386 TTIGMDYRTALRRIILPQAARTATPPLANTLVSLLKDTSLASAI 429


>gi|168183031|ref|ZP_02617695.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|237794466|ref|YP_002862018.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182673740|gb|EDT85701.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|229261625|gb|ACQ52658.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Ba4 str. 657]
          Length = 222

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 67/88 (76%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +M++ IALS   +A++AEI+R  ++++ +GQMEA+++LG+T  +A + ++LPQA R  
Sbjct: 90  PAYMAVVIALSMNGSAYMAEIIRGAIMSIDKGQMEASLSLGMTEFQAMKRIILPQAARVA 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           IP L + +++LLK+SSLA  VG A+++S
Sbjct: 150 IPSLGNSFIDLLKSSSLAFTVGVAEILS 177


>gi|307265618|ref|ZP_07547172.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389622|ref|ZP_08211188.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter ethanolicus JW 200]
 gi|306919416|gb|EFN49636.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994337|gb|EGD52763.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 220

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 81/131 (61%), Gaps = 4/131 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG+TH  A R V++PQA+++I
Sbjct: 86  PAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SI 379
           +P L ++++ +LK S++   +GFADL      I + T +  E  +I   IY  +    S 
Sbjct: 146 LPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSITYKYFEPYIIIAAIYFVMTFIFSR 205

Query: 380 MIALFMNRLNA 390
           ++ +F  RL A
Sbjct: 206 LLGIFERRLRA 216


>gi|255973159|ref|ZP_05423745.1| amino acid ABC transporter permease [Enterococcus faecalis T1]
 gi|255976202|ref|ZP_05426788.1| amino acid ABC transporter permease [Enterococcus faecalis T2]
 gi|255964177|gb|EET96653.1| amino acid ABC transporter permease [Enterococcus faecalis T1]
 gi|255969074|gb|EET99696.1| amino acid ABC transporter permease [Enterococcus faecalis T2]
          Length = 235

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 11/159 (6%)

Query: 247 DKPVLGQF--NFIGGSTVSP--EFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299
           + P+L QF   + G   +SP   F    IA+ C   Y  A+I+E+VRSG+ AVPRGQ EA
Sbjct: 77  NTPLLIQFIVVYYGFPLLSPLLSFSITTIAILCVGLYHGAYISEVVRSGIGAVPRGQFEA 136

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + GLT+ +  R V+LPQA R ++PPLT+Q +NL+KN+S    +  AD++    +  + 
Sbjct: 137 AYSQGLTYGQTMRYVILPQAWRIMLPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSV 196

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I    +  F+Y  L   +A     L  K+  K KK
Sbjct: 197 NLNYIPAFALAGFLYFILCFPLA----NLARKMEEKNKK 231


>gi|228963739|ref|ZP_04124881.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228795975|gb|EEM43441.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 214

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP      LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                              +++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------IIAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQIISGQ 181



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|226951613|ref|ZP_03822077.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Acinetobacter sp. ATCC 27244]
 gi|294651270|ref|ZP_06728596.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226837643|gb|EEH70026.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Acinetobacter sp. ATCC 27244]
 gi|292822836|gb|EFF81713.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 247

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 101/181 (55%), Gaps = 13/181 (7%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL---HF 246
           +  + +LG +L +      R    KT +A+   Y++ F    +P L+ + + + +     
Sbjct: 40  WTIAMLLGSILGIM-----RTLPNKTARAIGTAYVTLFR--NVPLLIQLFIWFYVVPNFL 92

Query: 247 DKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P+   + + +G +T +   +S  I L  +TAA + E VR+G+ A+P+GQ+ A  A+G 
Sbjct: 93  PAPIKNWWMSDLGANTTA--LISASIGLGLFTAARVCEQVRTGIEALPQGQINAGYAMGF 150

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +  R V+LPQ+ R+I+PPL+S+  N +KN+S+A  VG A+++S   TI   T   IE
Sbjct: 151 STAQLYRYVILPQSFRTILPPLSSELTNCVKNTSVASLVGVAEIISQMKTISEYTQNTIE 210

Query: 366 I 366
           I
Sbjct: 211 I 211



 Score = 36.6 bits (83), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATI---IGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           D++Y   ++ G     WL    ++  TI   +G+++G  R   NK    I   YV +FRN
Sbjct: 18  DTTYLNWVVTGL---GWLVVIAVVAWTIAMLLGSILGIMRTLPNKTARAIGTAYVTLFRN 74

Query: 139 IPPLVVIFFLYKSVLSVLPIP 159
           +P L+ +F  +  V + LP P
Sbjct: 75  VPLLIQLFIWFYVVPNFLPAP 95


>gi|254512963|ref|ZP_05125029.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11]
 gi|221532962|gb|EEE35957.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11]
          Length = 280

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 84/126 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A I+EI R+G+ A+P GQ EAA ++G++  +A R ++LPQ++R ++PP+T +
Sbjct: 155 LTLAVFHSALISEIFRAGINAIPSGQWEAAKSIGMSTPQAYRYIILPQSVRFMLPPMTGE 214

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K+S++   +  A+L + G  II+ T  + EI      +YL +++++++ ++ L  
Sbjct: 215 VVHLIKSSAIVSVIAVAELTTFGRNIISDTYMSFEIWFTIALVYLVVTLILSIGVSHLEK 274

Query: 391 KIALKE 396
           K A+ +
Sbjct: 275 KYAVDQ 280


>gi|116494831|ref|YP_806565.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei ATCC 334]
 gi|116104981|gb|ABJ70123.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
          Length = 485

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 4/130 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  IA+S  +AA++AEI+RSG+ ++P GQ EAA +LGL+ R+    V+LPQA+++I
Sbjct: 353 PALIAGLIAVSLNSAAYVAEIIRSGIDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNI 412

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSI 379
            P L +++++L+K SS+   +G  DL+     +   T + ++ IL+ M +Y      LS 
Sbjct: 413 WPALGNEFISLIKESSIVSIIGVTDLIYQLTVVQTATYKGVQPILVAMALYFVLTFGLSK 472

Query: 380 MIALFMNRLN 389
           +++ F  ++N
Sbjct: 473 LLSHFERKMN 482


>gi|46579088|ref|YP_009896.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46448501|gb|AAS95155.1| ABC transporter, permease protein, His/Glu/Gln/Arg/opine family
           [Desulfovibrio vulgaris str. Hildenborough]
          Length = 271

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 89/152 (58%), Gaps = 10/152 (6%)

Query: 247 DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + P+L Q  F+    ++P F      S  +AL  +  A++AEI+R+G+ AVP+GQ EA+ 
Sbjct: 118 NTPLLVQL-FVTYFAIAPVFGLGRMASAVMALGVFEGAYMAEILRAGIAAVPQGQWEASR 176

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+        V+LPQA+R  +PPLT Q ++L+K+SSLA A+   +L     TII +T 
Sbjct: 177 SLGMDEPGTYVQVILPQALRRALPPLTGQAVSLVKDSSLASAIAIHELTMQAQTIIAETF 236

Query: 362 QAIEIIL----IWMFIYLSLSIMIALFMNRLN 389
              E+ L    I++ + LSLS +  L   R++
Sbjct: 237 LTFEVWLLTAAIYLCVTLSLSAVARLLERRMH 268


>gi|328471192|gb|EGF42094.1| putative amino acid ABC transporter permease [Vibrio
           parahaemolyticus 10329]
          Length = 246

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 96/181 (53%), Gaps = 29/181 (16%)

Query: 192 FSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           F+  LG++++L A   S         + +  +++P+L +  ++ +G+P L+ ++L +   
Sbjct: 58  FAMTLGLLIALPALSRSPTLKWMNRIYVEVIRSIPVLVLLLWVYYGMPALLDVSLNH--- 114

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                               F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL
Sbjct: 115 --------------------FWAGVIALTIAESAFMAEVFRGGIQAINRGQHEAAESLGL 154

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + +  RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      +E
Sbjct: 155 NYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLE 214

Query: 366 I 366
           I
Sbjct: 215 I 215



 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 43/70 (61%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++F  M  A  +G L+    LS +  + W+ R+YVEV R+IP LV++ ++
Sbjct: 41  LVAGFNDTIQVSFLSMCFAMTLGLLIALPALSRSPTLKWMNRIYVEVIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 101 YYGMPALLDV 110


>gi|118444342|ref|YP_877030.1| amino acid ABC transporter, permease protein [Clostridium novyi NT]
 gi|118134798|gb|ABK61842.1| amino acid ABC transporter, permease protein [Clostridium novyi NT]
          Length = 232

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 104/188 (55%), Gaps = 23/188 (12%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALPLL 222
           FLN  G++   L++ T     +FS +LG + +L           +S  F E   +  PLL
Sbjct: 15  FLNGAGITI-VLSLIT----VIFSSILGTIFALMKLSKIKILKVISNVFIEIV-RGTPLL 68

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                  +G+PTL+  A       D  V+G  +F G          + I L+  + A++A
Sbjct: 69  VQVYIFYYGIPTLLQNAGVELPQID--VMGN-DFTG-------LCMIVITLALNSTAYVA 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+RSG+ +V +GQMEAA +LGLTHR A R V++PQA+++I+P L ++++ ++K SS+  
Sbjct: 119 EIIRSGIESVNKGQMEAARSLGLTHRMAMRYVIIPQAIKNILPALGNEFITVIKESSIVS 178

Query: 343 AVGFADLV 350
            VG  +L+
Sbjct: 179 VVGIKELM 186


>gi|15675263|ref|NP_269437.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS]
 gi|13622436|gb|AAK34158.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS]
          Length = 724

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 21/149 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           + +PL+ ++ F+ +G+P L+     +Q                   SP  +F++  IALS
Sbjct: 565 RGIPLMIVAAFIFWGVPNLIESMTGHQ-------------------SPINDFLAATIALS 605

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P   +Q++  
Sbjct: 606 LNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVIS 665

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           LK++++  A+G  +L   G  II +  Q+
Sbjct: 666 LKDTTIVSAIGLVELFQTGKIIIARNYQS 694


>gi|307706378|ref|ZP_07643190.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307709103|ref|ZP_07645562.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
 gi|307618296|gb|EFN97451.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307620049|gb|EFN99166.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
          Length = 227

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 117/208 (56%), Gaps = 17/208 (8%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+         F +++ K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + Q   +G        +   + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  + A
Sbjct: 83  I-QVGILGVDL--SRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNA 139

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L  
Sbjct: 140 MRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLFA 199

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
            F YL ++ ++ + +     ++   +KK
Sbjct: 200 AFYYLIMTSILTVALKAFEKRMGQGDKK 227


>gi|323529256|ref|YP_004231408.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386258|gb|ADX58348.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 216

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 67/101 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS Y  A+IAE+ RSG+ AVP+GQ E +  LGL+  +    V+LPQ  + ++P
Sbjct: 86  FAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVSQILGLSKTQTFFSVILPQTGKIVMP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           PL  QYL+L+K++S+   +G ++L+  G  I+++ G+ +EI
Sbjct: 146 PLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRVGKPVEI 186


>gi|301052296|ref|YP_003790507.1| ABC transporter permease [Bacillus anthracis CI]
 gi|300374465|gb|ADK03369.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus biovar anthracis str. CI]
          Length = 214

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   +I + IIG+++G  R     +V+ I  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|328554364|gb|AEB24856.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens
           TA208]
 gi|328912768|gb|AEB64364.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens
           LL3]
          Length = 218

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 101/181 (55%), Gaps = 27/181 (14%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T + LPLL I  F  F LP    I +K +             I  + ++        AL
Sbjct: 60  ETIRNLPLLLIIFFTFFALPE---IGIKLE-------------ITAAAIT--------AL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + +A ++EI+RSGL +V +GQ+EAA + GLT+ +   LV++PQA+R ++PP+ SQ+++
Sbjct: 96  TIFESAMLSEIIRSGLQSVEKGQIEAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           LLK++SLAV +   +L+     +  Q+   G    I L+   +Y +++  ++L   RL A
Sbjct: 156 LLKDTSLAVVIALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYSLSLAARRLEA 215

Query: 391 K 391
           +
Sbjct: 216 R 216


>gi|228937880|ref|ZP_04100508.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228970761|ref|ZP_04131401.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228977336|ref|ZP_04137731.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228782313|gb|EEM30496.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228788886|gb|EEM36825.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821786|gb|EEM67786.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
          Length = 214

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181


>gi|167758321|ref|ZP_02430448.1| hypothetical protein CLOSCI_00660 [Clostridium scindens ATCC 35704]
 gi|167664218|gb|EDS08348.1| hypothetical protein CLOSCI_00660 [Clostridium scindens ATCC 35704]
          Length = 226

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 28/203 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVL 237
           +T++      +F+ ++G ++ LF             K  PL +I+     ++ G P LV 
Sbjct: 20  ITLEMTVFSLIFATIIGTIVGLF----------NVSKIKPLQFIANIYIDIVRGTPLLVQ 69

Query: 238 IALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           + + Y      L F  P +G F        +  F++  + LS    A++AEI+R G+ AV
Sbjct: 70  VFIMYYGLTQFLQFQWPAIGGF--------TSAFVAGVVTLSFNAGAYMAEIIRGGIEAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA +LGL +RKA   ++LPQA R+++P + +Q++  LK++SL   +G  +L   
Sbjct: 122 DKGQMEAARSLGLPYRKAMWKIILPQAFRTMLPSIINQFIISLKDTSLISVIGPRELTQN 181

Query: 353 GGTIINQTGQAIEIILIWMFIYL 375
           G  I      +  ++ IW+ + L
Sbjct: 182 GKII--AANSSTRVMAIWIVVAL 202



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 30/46 (65%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +I ATIIGT+VG   +S  K + +I  +Y+++ R  P LV +F +Y
Sbjct: 29  LIFATIIGTIVGLFNVSKIKPLQFIANIYIDIVRGTPLLVQVFIMY 74


>gi|229042504|ref|ZP_04190249.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH676]
 gi|228726857|gb|EEL78069.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH676]
          Length = 214

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/79 (49%), Positives = 63/79 (79%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADL 349
           +++LLK++SLAV +   +L
Sbjct: 153 FISLLKDTSLAVVISLPEL 171



 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|25010744|ref|NP_735139.1| hypothetical protein gbs0689 [Streptococcus agalactiae NEM316]
 gi|77410798|ref|ZP_00787156.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|23095098|emb|CAD46333.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77163177|gb|EAO74130.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
          Length = 231

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 64/95 (67%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +   F +  + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  + ++LPQ
Sbjct: 93  GHVMISAFFTAVLCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQFIILPQ 152

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           A+R+I+PP+T+Q +NL+KN+S    +  AD++ V 
Sbjct: 153 AVRTILPPMTNQVVNLIKNTSTVAIISGADIMFVA 187


>gi|153010586|ref|YP_001371800.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562474|gb|ABS15971.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 323

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI R+G+ ++PRGQ E A ALGL   +   LV LPQAMR IIPP  +Q
Sbjct: 196 LALSLCYGAYMTEIFRAGIESIPRGQQEGAYALGLGPSQTMWLVTLPQAMRIIIPPTGNQ 255

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL   +G  +L+ +  T      + IE+++    IY +LSI++     +L A
Sbjct: 256 FIAMLKDSSLVSVIGVWELMYLARTQGQTEFRHIEMLITASMIYWALSIVLEYGQAKLEA 315

Query: 391 K 391
           +
Sbjct: 316 R 316


>gi|260461850|ref|ZP_05810096.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785375|ref|YP_004144851.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032491|gb|EEW33756.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171263|gb|ADV14801.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 214

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 27/228 (11%)

Query: 165 LPFGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           L +G+    R L F  L  T+  +      SF++G V+     +++  FH +       L
Sbjct: 3   LDWGIIWEYRALLFQGLGTTLRISLISIALSFLIGSVVGCL--KVTAGFHLRKS-----L 55

Query: 223 YISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                +I  +P +V L A+ Y    D  + G                  IAL+ +  A+I
Sbjct: 56  DTCVEVIRDIPVVVKLFAIYYAFGIDASISG-----------------VIALTLHQGAYI 98

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +++V SG+ A+P GQ EA IA GL+ R+    ++LPQA+R  +PPLTSQ++ ++KNSS  
Sbjct: 99  SDVVTSGIRALPTGQWEAGIASGLSGRQVFTRIILPQAIRITVPPLTSQFIQVVKNSSTV 158

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +   DL  +   I  +T + +E  +    +YL L+++IA  M+ + 
Sbjct: 159 MLIAIEDLTFMTQQIEQETFRGMEAAIAVTVLYLMLALLIAGAMSAVQ 206


>gi|196047128|ref|ZP_03114345.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|229182976|ref|ZP_04310208.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BGSC 6E1]
 gi|196021998|gb|EDX60688.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|228600433|gb|EEK58021.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BGSC 6E1]
          Length = 214

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG++VG  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVVGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|52144669|ref|YP_082159.1| glutamine ABC transporter permease [Bacillus cereus E33L]
 gi|51978138|gb|AAU19688.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus E33L]
          Length = 214

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|260654207|ref|ZP_05859697.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Jonquetella anthropi E3_33 E1]
 gi|260630840|gb|EEX49034.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Jonquetella anthropi E3_33 E1]
          Length = 521

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 95/170 (55%), Gaps = 13/170 (7%)

Query: 229 IFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFI 281
           +FG   L  +A+ Y +L    PVL Q  F F G    G  +SP F +  I L    AA+ 
Sbjct: 329 LFGPRWLSALAVGYIELLRGTPVLIQLFFIFYGLPNVGIKLSP-FAAGIIGLGMNYAAYE 387

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+GL+AVPR QME A+ALG+T  +A R V++PQA+R  +PP+T+ +++LLK+SSL 
Sbjct: 388 AENYRAGLMAVPRQQMEGALALGMTRSQALRHVVVPQAIRVSLPPVTNDFISLLKDSSLV 447

Query: 342 VAVGFADLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMNR 387
             +   DL    G + N      G  I + LI+  I L   + +A F  R
Sbjct: 448 SMITLIDLTKAYGQLANTYYDFFGIGIMVALIYFLIGLPF-VRLARFAER 496


>gi|229165585|ref|ZP_04293360.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH621]
 gi|228617892|gb|EEK74942.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH621]
          Length = 214

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ I    VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|169334520|ref|ZP_02861713.1| hypothetical protein ANASTE_00923 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259237|gb|EDS73203.1| hypothetical protein ANASTE_00923 [Anaerofustis stercorihominis DSM
           17244]
          Length = 217

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 95/160 (59%), Gaps = 7/160 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG++L+L    +S     K  K +  +Y  T++  G P L+ I + Y   F  P++ 
Sbjct: 23  SIVLGMILALVIAFMSIG-RNKILKGIAWIY--TWVFRGTPLLLQIMVVY---FAIPLMV 76

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +   +G       F +  IAL+  TAA+ +EI R+G+ ++ +GQMEAA ALG+T+ +A  
Sbjct: 77  K-QMVGSPLNFEPFTAAIIALTLNTAAYTSEIFRAGIQSIDKGQMEAAKALGMTYSQAMF 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            V++PQ +  +IPP  ++++ +LK++SL   +G ADL+ V
Sbjct: 136 KVIIPQTVSRVIPPFANEFIMILKDTSLVSTIGMADLMRV 175


>gi|23465743|ref|NP_696346.1| permease protein of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|227546355|ref|ZP_03976404.1| ABC superfamily ATP binding cassette transporter permease protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|23326428|gb|AAN24982.1| permease protein of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|227213336|gb|EEI81208.1| ABC superfamily ATP binding cassette transporter permease protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
          Length = 327

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNA 390
           F YL ++ ++ +  +RL A
Sbjct: 264 FWYLLITSILMVVQSRLEA 282


>gi|322690626|ref|YP_004220196.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320455482|dbj|BAJ66104.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 327

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNA 390
           F YL ++ ++ +  +RL A
Sbjct: 264 FWYLLITSILMVVQSRLEA 282


>gi|56421989|ref|YP_149307.1| amino acid ABC transporter permease [Geobacillus kaustophilus
           HTA426]
 gi|56381831|dbj|BAD77739.1| amino acid ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
          Length = 218

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 72/107 (67%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           SL ++LS  +AA++AEI R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP 
Sbjct: 91  SLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPPF 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            ++++ L+K+SSL + +   +++  G     +  +  E  L   FIY
Sbjct: 151 ANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGEYYRVWEPYLTVAFIY 197


>gi|328957593|ref|YP_004374979.1| high affinity arginine ABC transporter binding lipoprotein
           [Carnobacterium sp. 17-4]
 gi|328673917|gb|AEB29963.1| high affinity arginine ABC transporter binding lipoprotein
           [Carnobacterium sp. 17-4]
          Length = 507

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 80/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   S  IA+S  +AA+I EI+RSGL +VP+GQ EAA +LG++ + + R ++ PQA+++I
Sbjct: 376 PALASGIIAVSLNSAAYICEIIRSGLNSVPKGQAEAARSLGMSKKISMRQIIFPQALKNI 435

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ ++K SS+   +G +DL+     + + + + I  +++ M IY  L+  +  
Sbjct: 436 WPALGNEFITVIKESSIVSIIGVSDLIFQTKVVTSVSYRGIAPLVVTMIIYFILTFSLTK 495

Query: 384 FMNRLNAKI 392
            +N    K+
Sbjct: 496 LLNHYEGKM 504



 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%)

Query: 111 GTLVGAG----RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           G+++G G    R+S NK++ ++   YVE  R  P ++ + F+Y +V  ++ IP
Sbjct: 324 GSILGIGLSFMRMSKNKIMHFVATAYVEFVRGTPMMIQVMFIYFAVGYLINIP 376


>gi|241763925|ref|ZP_04761968.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241366820|gb|EER61252.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 222

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 13/205 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I   S +LG V+ L       +   +   AL   Y++   I G P LV +   + L F 
Sbjct: 24  EITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAA--IRGTPLLVQL---FILFFG 78

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P   QF  +      P F+   I L  Y+ A+++E+VR  + ++ +GQMEAA ++G++ 
Sbjct: 79  LP---QFGIL-----LPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDKGQMEAARSIGMSS 130

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
             A R V+LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ 
Sbjct: 131 GLAMRTVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVY 190

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
           L    +Y  L+ + +L + R+  ++
Sbjct: 191 LAIAVVYFILTGVTSLVLRRMELRL 215



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIFF 147
           +L G V T  +  + ++   ++G LVG GRL+  + V + +C  YV   R  P LV +F 
Sbjct: 15  LLAGAVVTVEITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAAIRGTPLLVQLFI 74

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           L+        +P   I+LP
Sbjct: 75  LF------FGLPQFGILLP 87


>gi|213692879|ref|YP_002323465.1| transcriptional regulator, Fis family [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213524340|gb|ACJ53087.1| transcriptional regulator, Fis family [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|320459053|dbj|BAJ69674.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 327

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNA 390
           F YL ++ ++ +  +RL A
Sbjct: 264 FWYLLITSILMVVQSRLEA 282


>gi|296453673|ref|YP_003660816.1| Fis family transcriptional regulator [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296183104|gb|ADG99985.1| transcriptional regulator, Fis family [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 331

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNA 390
           F YL ++ ++ +  +RL A
Sbjct: 264 FWYLLITSILMVVQSRLEA 282


>gi|271964465|ref|YP_003338661.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
 gi|270507640|gb|ACZ85918.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptosporangium roseum DSM 43021]
          Length = 282

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 83/127 (65%), Gaps = 5/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   +A++AE +R+GL AVP+GQMEAA +LG++H +A   +++PQA+R +IPP T+Q
Sbjct: 154 LGLTIVGSAYMAETLRAGLQAVPKGQMEAARSLGMSHARAMTTIVIPQAVRIVIPPTTNQ 213

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +++LLK+SSL + +G    + +L   G  + +    A  I+++ +  YL ++I +    +
Sbjct: 214 FVSLLKDSSLVLFLGVSGEYVELTKFGNDMASTFANATPILVVGV-TYLLVTIPLGYLAS 272

Query: 387 RLNAKIA 393
           RL  + A
Sbjct: 273 RLEKRQA 279


>gi|227327467|ref|ZP_03831491.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 131

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 80/128 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  + AF AE+ R  + ++  GQ E A ALG++   A R V+LPQA+R +IPP   +
Sbjct: 2   IALSAQSGAFYAEVYRGAISSIHAGQWEGAKALGMSKSTALRRVILPQALRRMIPPFIER 61

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              L+K++SLA ++ +++L+     I +QT + +E+  +   +Y +L ++I+LF   +  
Sbjct: 62  SFELIKSTSLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIEK 121

Query: 391 KIALKEKK 398
           +++L +++
Sbjct: 122 RLSLADRR 129


>gi|205351949|ref|YP_002225750.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205271730|emb|CAR36563.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326626988|gb|EGE33331.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 224

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R++ 
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMA 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI  + G  +E+IL    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 216 VSYLKKR 222



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|194017152|ref|ZP_03055764.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
 gi|194011020|gb|EDW20590.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
          Length = 216

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 99/167 (59%), Gaps = 14/167 (8%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I  LP L++I   Y   F  P +G    I  S ++        AL+ + +A ++EI+RSG
Sbjct: 62  IRNLPLLLIIFFTY---FALPEIGIKLSITASAIA--------ALTVFESAMLSEIIRSG 110

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++ +GQ+EAA + GLT+ +  +++++PQA+R ++PP+ SQ+++LLK++SLAV +   +
Sbjct: 111 LKSIDKGQIEAARSSGLTYIQTLKMIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPE 170

Query: 349 LVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+     I+N   Q+  + I L+   +Y  ++  ++L   RL  + A
Sbjct: 171 LLH-HAQILNGQSQSYLLPIFLLAAMMYFVVNFSLSLLARRLEYRQA 216



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  +AF  +I + +IG ++G  R +   +++ I  V VE  RN+P L++IFF 
Sbjct: 15  LLEGFAVTLKVAFISIILSFLIGLVIGTLRFAQIPVLSKILAVVVETIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|319407434|emb|CBI81085.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella sp. 1-1C]
          Length = 250

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + +  AL  +T+A IAE VRSG+ ++P GQ  AA+A+G    ++ R ++LP+A+R+I
Sbjct: 112 PPILLIICALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPRAIRTI 171

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLTS+ + ++KNSS+A AV   +L+      I +     E  L+   +Y+ +S+ I +
Sbjct: 172 MPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTLLYIVISLFIFV 231

Query: 384 FMNRLNAKI 392
            M  +   I
Sbjct: 232 LMTIIEKAI 240


>gi|170759870|ref|YP_001787408.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169406859|gb|ACA55270.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 228

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 103/182 (56%), Gaps = 14/182 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L     + +GLPT   I +++    + P+LG  NF       P+F +  +ALS  
Sbjct: 61  RGTPVLVQLYIIYYGLPT---IGIRFP---EVPILGS-NF-------PDFFAGILALSIN 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AEI+R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++ ++K
Sbjct: 107 SGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            SS+   +G  +L+    T+     +  E +L+   +Y  L+  ++  +     ++ + +
Sbjct: 167 ESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAAVMYFILTFTLSKLLGVAERRMRVSD 226

Query: 397 KK 398
           + 
Sbjct: 227 RN 228


>gi|206967971|ref|ZP_03228927.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|228951133|ref|ZP_04113249.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229068327|ref|ZP_04201630.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus F65185]
 gi|229077955|ref|ZP_04210564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-2]
 gi|229177167|ref|ZP_04304556.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 172560W]
 gi|206736891|gb|EDZ54038.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|228606348|gb|EEK63780.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 172560W]
 gi|228705293|gb|EEL57670.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-2]
 gi|228714788|gb|EEL66660.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus F65185]
 gi|228808543|gb|EEM55046.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 214

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ I  V VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGVIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|30018827|ref|NP_830458.1| glutamine transport system permease protein glnP [Bacillus cereus
           ATCC 14579]
 gi|229108251|ref|ZP_04237873.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-15]
 gi|229126073|ref|ZP_04255095.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-Cer4]
 gi|229143369|ref|ZP_04271800.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST24]
 gi|296501402|ref|YP_003663102.1| glutamine transport system permease GlnP [Bacillus thuringiensis
           BMB171]
 gi|29894369|gb|AAP07659.1| Glutamine transport system permease protein glnP [Bacillus cereus
           ATCC 14579]
 gi|228640176|gb|EEK96575.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST24]
 gi|228657395|gb|EEL13211.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-Cer4]
 gi|228675267|gb|EEL30489.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-15]
 gi|296322454|gb|ADH05382.1| glutamine transport system permease protein glnP [Bacillus
           thuringiensis BMB171]
          Length = 214

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 40.0 bits (92), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|50123384|ref|YP_052551.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium atrosepticum SCRI1043]
 gi|49613910|emb|CAG77363.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium atrosepticum SCRI1043]
          Length = 242

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 115/223 (51%), Gaps = 11/223 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   V S + G+  ++  T L        G    LL +       +P ++
Sbjct: 17  TFPDGPLGGAALTLVMSLLAGVASAVLGTILGVALAMSRGGWSALLAMVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+ RGQ
Sbjct: 77  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LGL+  +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            N++    +E+ L    +Y    + + L  N +NA+ + +EK+
Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLSLELLANGVNARFSQQEKQ 229


>gi|228957063|ref|ZP_04118837.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802623|gb|EEM49466.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 214

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|319782448|ref|YP_004141924.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168336|gb|ADV11874.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 223

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 34/180 (18%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLP 233
           T+  +A  FV + ++GIVL   A  L R +        +    +A PLL    FL FGLP
Sbjct: 24  TVWLSALSFVGALIVGIVLC--AMNLQRGWLFRAPAKAYIDAVRATPLLAQLYFLYFGLP 81

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L                          V PE +   +ALS  + A+IAEI+R+G++++P
Sbjct: 82  RL------------------------GFVLPELVVGILALSLNSGAYIAEIIRAGILSIP 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EA++A G+T+ +  RLV+LPQA +  IPPL  Q + L+K+S+L   +  ++L   G
Sbjct: 118 RGQVEASVASGMTYVQRMRLVVLPQAFKVTIPPLLGQAIVLVKDSALLSLISVSELTRAG 177


>gi|319404433|emb|CBI78036.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella rochalimae ATCC BAA-1498]
          Length = 250

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + +  AL  +T+A IAE VRSG+ ++P GQ  AA+A+G    ++ R ++LP+A+R+I
Sbjct: 112 PPILLIICALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPRAIRTI 171

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLTS+ + ++KNSS+A AV   +L+      I +     E  L+   +Y+ +S+ I +
Sbjct: 172 MPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTLLYIVISLFIFI 231

Query: 384 FMNRLNAKI 392
            M  +   I
Sbjct: 232 LMTIIERAI 240


>gi|229010073|ref|ZP_04167287.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
 gi|228751206|gb|EEM01018.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
          Length = 214

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ I    VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|229188847|ref|ZP_04315881.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 10876]
 gi|228594660|gb|EEK52445.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 10876]
          Length = 214

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|307150942|ref|YP_003886326.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7822]
 gi|306981170|gb|ADN13051.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7822]
          Length = 398

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 76/123 (61%), Gaps = 3/123 (2%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + ++AA++AE +R GL +VPRGQ EAAIALGL       L++LPQA++++IP +  Q+++
Sbjct: 276 TIFSAAYLAENIRGGLQSVPRGQTEAAIALGLNPLLVLGLIILPQALKAVIPTIVGQFIS 335

Query: 334 LLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           L K++SL   VG  DL+ +  +I+      G+ +E+ L   FIY      ++L   +L  
Sbjct: 336 LFKDTSLLAIVGLVDLLGISQSILANPKYQGRNVEVYLFIAFIYWLCCSAMSLASRKLEQ 395

Query: 391 KIA 393
           K A
Sbjct: 396 KPA 398


>gi|114763148|ref|ZP_01442574.1| ABC transporter permease protein [Pelagibaca bermudensis HTCC2601]
 gi|114544201|gb|EAU47210.1| ABC transporter permease protein [Roseovarius sp. HTCC2601]
          Length = 223

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 64/93 (68%), Gaps = 1/93 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP F S   AL+  + A+ AEI RSG+ A+P+GQ EAA ALGL HR+    V+LPQ
Sbjct: 87  GVRLSP-FASAMTALTMVSGAYTAEIFRSGIEAIPKGQFEAAAALGLGHRQTMVDVILPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++R +IPPLT+  +N++K+++LA  V   DL+ 
Sbjct: 146 SIRMVIPPLTNNSINVVKDTALASVVAMPDLLK 178


>gi|111225333|ref|YP_716127.1| amino acid ABC transporter membrane protein [Frankia alni ACN14a]
 gi|111152865|emb|CAJ64612.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Frankia alni ACN14a]
          Length = 333

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 86/141 (60%), Gaps = 2/141 (1%)

Query: 255 NFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F+ G    + P F +  + L    AA++AEIVR+G+  V  GQ EAA ALG++   A R
Sbjct: 182 SFVSGDANHIVPLFAAAVLGLGLNEAAYMAEIVRAGINGVDAGQTEAASALGMSRALALR 241

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQAMR+IIPP  ++ +++LK +SL   + + +L++    +  +T Q I ++++   
Sbjct: 242 RIVLPQAMRTIIPPTGNETISMLKTTSLVSVISYNELLNATRIVYARTFQTIPLLIVAAL 301

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
            YL+L+ ++ L  ++L  + A
Sbjct: 302 WYLALTSVLTLGQHQLERRFA 322


>gi|229148980|ref|ZP_04277225.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1550]
 gi|228634520|gb|EEK91104.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1550]
          Length = 214

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|213966878|ref|ZP_03395028.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301381561|ref|ZP_07229979.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302061683|ref|ZP_07253224.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302131520|ref|ZP_07257510.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213928200|gb|EEB61745.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 233

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   I  S  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRIFEAYLVATVVYLAIS 213


>gi|126737006|ref|ZP_01752741.1| probable amino acid ABC transporter, permease protein [Roseobacter
           sp. SK209-2-6]
 gi|126721591|gb|EBA18294.1| probable amino acid ABC transporter, permease protein [Roseobacter
           sp. SK209-2-6]
          Length = 324

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 2/119 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT-RLVLLPQAMRSIIPPLTSQ 330
           ALS    A++ EI RSG+ ++P GQ EAA ALGL HR  T R V+LPQAMR IIPP  +Q
Sbjct: 198 ALSLVYGAYMTEIFRSGIQSLPAGQWEAADALGL-HRMVTFRKVILPQAMRVIIPPTGNQ 256

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ +LK+SSL   VG  DL+ +  T+     + +E+++    +Y  +SI++ L   R+ 
Sbjct: 257 FIAMLKDSSLVSVVGVWDLMFLARTVGRSDFKILEMLITASIVYWLMSIVLELVQKRIE 315


>gi|114566598|ref|YP_753752.1| hypothetical protein Swol_1071 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337533|gb|ABI68381.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 235

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 95/168 (56%), Gaps = 1/168 (0%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQFN 255
           G +L+L  T LS  F    G    LL +S + I  +P +V I   +    F + +L  F 
Sbjct: 36  GTLLTLEITALSVAFGMFLGLLAALLKMSPYKILAIPGIVYIDFFRGTPLFVQILLFYFG 95

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +     +  F +  I  S  + A+IAEIVR+G+ AV RGQ EAA +LG+ +R+A   V+
Sbjct: 96  ILPLVFDATSFQAAVIVCSLNSGAYIAEIVRAGIQAVDRGQTEAARSLGMNNRQAMWYVI 155

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           LPQA + +IPP+ ++++ +LK++SL   +G  +L   G  +++ T +A
Sbjct: 156 LPQAYKIVIPPMINEFIAMLKDTSLVAVIGAQELTHQGRILVSVTYEA 203


>gi|239622358|ref|ZP_04665389.1| permease protein of ABC transporter system [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|239514355|gb|EEQ54222.1| permease protein of ABC transporter system [Bifidobacterium longum
           subsp. infantis CCUG 52486]
          Length = 345

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 162 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 221

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 222 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 281

Query: 372 FIYLSLSIMIALFMNRLNA 390
           F YL ++ ++ +  +RL A
Sbjct: 282 FWYLLITSILMVVQSRLEA 300


>gi|116873682|ref|YP_850463.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742560|emb|CAK21684.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 486

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 68/91 (74%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T R + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQRASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|50123395|ref|YP_052562.1| amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613921|emb|CAG77374.1| probable amino acid ABC transporter, permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 256

 Score = 85.9 bits (211), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 8/177 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L + +T  ++ L  + L+ + +  +F  P+L   N  G       F ++   L  Y +A+
Sbjct: 60  LSWPATCWVYTLRGIPLMMVVFWTYFCVPLLIGHNISG-------FSTMLCTLVIYESAY 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEIVR G+ A+P GQ EA+ ALG++H KA RLV+LPQA+ + +P L SQ ++++K+S+L
Sbjct: 113 IAEIVRGGIQALPSGQYEASRALGMSHLKALRLVILPQALFNSLPSLISQLVSIIKDSTL 172

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   +L      + NQ   +  ++  I    Y  +        NRL + IA K 
Sbjct: 173 GYVINVPELTYAANQVSNQLLTKPFQVFAIVALSYYIICFSFTFLANRLESWIANKR 229


>gi|241114114|ref|YP_002973589.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240868687|gb|ACS66345.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 245

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+++ + L+ Y+AA  AE +R+G+ ++  GQ  A +ALGL+     R V+LPQA R II
Sbjct: 109 QFLTVVLCLTLYSAAKCAEQIRAGIESIAAGQRAAGLALGLSTGGIYRHVILPQAFRIII 168

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTS ++N+ KNS++A+ +G  +L      +   + Q  E  L    IY+ +++++   
Sbjct: 169 PPLTSDFMNVFKNSAVALTIGLMELTGQSRQLSEFSAQPFESFLAATVIYMLVTLLVVWL 228

Query: 385 MNRLNAK 391
           M+ + A+
Sbjct: 229 MHVIEAR 235



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 26/52 (50%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           A  +GTL G  R    + V W    YV  FRN P LV +F  +  +  +LP+
Sbjct: 43  ALALGTLFGVARTLPQRWVRWPSAAYVHCFRNTPLLVQLFLWFYVLPELLPV 94


>gi|318060995|ref|ZP_07979716.1| glutamate transporter permease [Streptomyces sp. SA3_actG]
 gi|318077285|ref|ZP_07984617.1| glutamate transporter permease [Streptomyces sp. SA3_actF]
          Length = 238

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 15/180 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL  I  F   GL   + IAL  +        G F  I        F    + L  Y
Sbjct: 74  RNIPLTVIIVFASLGLFQTLGIALGAE--------GDFKAI-------NFRLAVLGLILY 118

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T++F+ E VRSG+  VP GQ EAA ALGL+ R+   L++LPQA RS++ PL +  + L K
Sbjct: 119 TSSFVCEAVRSGINTVPMGQAEAARALGLSFRQVLALIILPQAFRSVVNPLANVLIALTK 178

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           N+++A A+G  +   +   +I    + + I L++ F ++ L++   L +  ++ K+A+K 
Sbjct: 179 NTTIAAAIGVGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVSKKVAIKR 238


>gi|302522279|ref|ZP_07274621.1| glutamate transporter permease [Streptomyces sp. SPB78]
 gi|302431174|gb|EFL02990.1| glutamate transporter permease [Streptomyces sp. SPB78]
          Length = 222

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YT++F+ E VRSG+  VP GQ EAA ALGL+ R+   L++LPQA RS++ PL + 
Sbjct: 97  LGLILYTSSFVCEAVRSGINTVPMGQAEAARALGLSFRQVLALIILPQAFRSVVNPLANV 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KN+++A A+G  +   +   +I    + + I L++ F ++ L++   L +  ++ 
Sbjct: 157 LIALTKNTTIAAAIGVGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVSK 216

Query: 391 KIALKE 396
           K+A+K 
Sbjct: 217 KVAIKR 222


>gi|228919496|ref|ZP_04082860.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228840139|gb|EEM85416.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 214

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VE+ RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVELIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|269139978|ref|YP_003296679.1| glutamate/aspartate transport system permease protein [Edwardsiella
           tarda EIB202]
 gi|267985639|gb|ACY85468.1| glutamate/aspartate transport system permease protein [Edwardsiella
           tarda EIB202]
 gi|304559811|gb|ADM42475.1| Glutamate Aspartate transport system permease protein GltJ
           [Edwardsiella tarda FL6-60]
          Length = 246

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++P GQ  A +A+G T  +  R VLLP A R I+P
Sbjct: 111 FVSSLLCLGLFTAARVCEQVRAAIQSLPAGQKSAGLAMGFTLPQTYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNS++A  +G  ++ +  G +++ +  A E        Y++++ ++ L M
Sbjct: 171 PLTSEMLNLVKNSAIASTIGLMEMAAQAGKLLDYSAHAYESFTAITLAYIAINGLLMLAM 230

Query: 386 NRLNAKIAL 394
           + L  ++ L
Sbjct: 231 HLLERRLQL 239



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++Y   I  G   T  L+ +  + A ++G+L+G  R   ++ +A I  +YVE+FRN+P +
Sbjct: 19  TTYLGWIWSGMQVTVALSLAAWVIAFLLGSLLGILRTLPSRPLAMIGALYVELFRNVPLI 78

Query: 143 VVIFFLYKSVLSVLP 157
           V  F  Y  V  +LP
Sbjct: 79  VQFFTWYLVVPELLP 93


>gi|42782597|ref|NP_979844.1| amino acid ABC transproter permease protein [Bacillus cereus ATCC
           10987]
 gi|206975541|ref|ZP_03236454.1| amino acid ABC transproter permease protein [Bacillus cereus
           H3081.97]
 gi|217960925|ref|YP_002339493.1| amino acid ABC transproter permease protein [Bacillus cereus AH187]
 gi|222096983|ref|YP_002531040.1| amino acid abc transproter, permease protein [Bacillus cereus Q1]
 gi|229140135|ref|ZP_04268694.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
 gi|42738523|gb|AAS42452.1| amino acid ABC transproter, permease protein VC0009 [Bacillus
           cereus ATCC 10987]
 gi|206746443|gb|EDZ57837.1| amino acid ABC transproter permease protein [Bacillus cereus
           H3081.97]
 gi|217064180|gb|ACJ78430.1| amino acid ABC transproter permease protein [Bacillus cereus AH187]
 gi|221241041|gb|ACM13751.1| amino acid ABC transproter, permease protein [Bacillus cereus Q1]
 gi|228643347|gb|EEK99619.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
          Length = 222

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 115/222 (51%), Gaps = 21/222 (9%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           SFP L      T+       + SFV+GI L++     ++  +     ++  +YIS F   
Sbjct: 11  SFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLY-----SIARVYISFFR-- 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV +   + L+F  P           TV     +  I LS   AA+++EI+R  L 
Sbjct: 64  GTPLLVQL---FVLYFGLP-----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+ A+G A+++
Sbjct: 116 AVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEIL 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 176 AQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217


>gi|23335783|ref|ZP_00121016.1| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189439798|ref|YP_001954879.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|312133204|ref|YP_004000543.1| hism6 [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482550|ref|ZP_07941565.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|189428233|gb|ACD98381.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|291517267|emb|CBK70883.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|311772405|gb|ADQ01893.1| HisM6 [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915972|gb|EFV37379.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 331

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNA 390
           F YL ++ ++ +  +RL A
Sbjct: 264 FWYLLITSILMVVQSRLEA 282


>gi|19746459|ref|NP_607595.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS8232]
 gi|19748662|gb|AAL98094.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS8232]
          Length = 228

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269
           K     PL ++    ++   G P +V I + +  +HF+         IG   +  +F  L
Sbjct: 42  KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 96

Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I +S  + A+I+EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P 
Sbjct: 97  LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 156

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ ++K+S+L   +G  +L +   +++  T   I  +L+  F YL ++ ++A  + 
Sbjct: 157 LGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMITTVMAQLLA 216

Query: 387 RLNAKIA 393
            L   +A
Sbjct: 217 VLERHMA 223


>gi|206978167|ref|ZP_03239049.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|206743639|gb|EDZ55064.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
          Length = 214

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK+++LAV +   +L+     I  Q
Sbjct: 153 FISLLKDTALAVVISLPELIHNAQIISGQ 181



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|325125285|gb|ADY84615.1| Glutamine ABC transporter permease component [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 222

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 15/213 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +    + SFV+G+ L L   R +R    KT +   ++ +   +I  LP L++I  
Sbjct: 22  VTIEVSVISIILSFVIGLALGLI--RFTR-IDAKTTRISKVVGVIIDIIRNLPLLLIIFF 78

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F  PV+G             F +  IA+  + +A IAE+VR+G++AV  GQME A
Sbjct: 79  SY---FGLPVMG--------IRVDAFQASVIAMVVFESAMIAEVVRTGIMAVDPGQMEGA 127

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359
            + G+T+ +A   V+ PQA+  +IP L SQ+++L+K++SLA  +   +L+     I NQ 
Sbjct: 128 RSNGMTYMQAMTHVVFPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEIIYNQN 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T   I + L    +Y  +   ++ F N L+ +I
Sbjct: 188 TKYMIPMYLAVAVMYFIICFALSSFANYLSKRI 220


>gi|322688640|ref|YP_004208374.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
           157F]
 gi|320459976|dbj|BAJ70596.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 331

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNA 390
           F YL ++ ++ +  +RL A
Sbjct: 264 FWYLLITSILMVVQSRLEA 282


>gi|320334506|ref|YP_004171217.1| polar amino acid ABC transporter inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
 gi|319755795|gb|ADV67552.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
          Length = 404

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 1/135 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++ +AL+ +T A++AEIVR+G+ A+PRGQ EAA ALGL+       V+LPQA+R++I
Sbjct: 262 QFWAVILALALFTGAYVAEIVRAGIRALPRGQDEAARALGLSGTHTMLSVILPQALRNMI 321

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIAL 383
           PPL  Q+++L K++SL   +G  +L        N+   A  EI L    +Y   +  ++ 
Sbjct: 322 PPLVGQFISLFKDTSLVSIIGLIELAGAARITGNRVVTATFEIYLTVAVLYFIFAYALSS 381

Query: 384 FMNRLNAKIALKEKK 398
              RL A    +  +
Sbjct: 382 AARRLEAPTGRRVAR 396


>gi|144899136|emb|CAM76000.1| binding-protein-dependent transport system inner membrane component
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 380

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/76 (50%), Positives = 58/76 (76%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           ++ +TAA++AE VR GL A+PRGQ EAA ALGL++ +  RL++LPQA+R +IPP+ +Q++
Sbjct: 252 MTLFTAAYLAEAVRGGLQAIPRGQEEAADALGLSYWRKMRLIVLPQALRLVIPPIVNQFI 311

Query: 333 NLLKNSSLAVAVGFAD 348
           +  K++SL   VG  D
Sbjct: 312 SCFKDTSLVTIVGLYD 327


>gi|308067188|ref|YP_003868793.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
 gi|305856467|gb|ADM68255.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
          Length = 219

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 27/178 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL +  F   GLPTL +           P+ G   F+ G+          + L+ Y
Sbjct: 64  RNIPLLIVVLFFYLGLPTLGI-----------PLDG---FVSGT----------LGLTVY 99

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TA+FIAE +R+G+ AVP+GQ EAA + GL++ +    ++LPQA++ ++P + +Q++NL+K
Sbjct: 100 TASFIAEAIRAGIQAVPKGQFEAARSSGLSYNQTMINIILPQAIKVVLPAIGNQFINLVK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI---MIALFMNRLNAK 391
           NSS+   V   DL+     I + T   I +  I   +YL L++    + L+M R  +K
Sbjct: 160 NSSVLAIVAGLDLMYYSDLINSDTFLPITVYAITALLYLILTVPLSFLVLYMERRLSK 217



 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G ++T   +   +I + I+G ++   R++  K + WI  VYVEV RNIP L+V+ F Y  
Sbjct: 19  GLLHTVQASVIALIGSFILGAIIAILRIAPFKWLNWIGTVYVEVIRNIPLLIVVLFFYLG 78

Query: 152 VLSVLPIP 159
            L  L IP
Sbjct: 79  -LPTLGIP 85


>gi|320007607|gb|ADW02457.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 214

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VP GQ EAA +LG++  +    V+LPQA RS+IPP+ S 
Sbjct: 89  LALGCYTSAFICEALRSGINTVPTGQGEAARSLGMSFGQTLGNVVLPQAFRSVIPPVGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
            + L KNS++A A    +L+    T +N+ G +I    +W+ + YL +++ I+   N L 
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYKT-LNELGYSIIWTFVWIAVGYLIITLAISALFNVLE 207

Query: 390 AK 391
            +
Sbjct: 208 KR 209


>gi|21910697|ref|NP_664965.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28895613|ref|NP_801963.1| amino acid ABC transporter (permease protein) [Streptococcus
           pyogenes SSI-1]
 gi|21904900|gb|AAM79768.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28810862|dbj|BAC63796.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes SSI-1]
          Length = 228

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269
           K     PL ++    ++   G P +V I + +  +HF+         IG   +  +F  L
Sbjct: 42  KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 96

Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I +S  + A+I+EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P 
Sbjct: 97  LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 156

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ ++K+S+L   +G  +L +   +++  T   I  +L+  F YL ++ ++A  + 
Sbjct: 157 LGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLA 216

Query: 387 RLNAKIA 393
            L   +A
Sbjct: 217 VLERHMA 223


>gi|330970134|gb|EGH70200.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 233

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   I  +  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213


>gi|163789714|ref|ZP_02184151.1| predicted transporter subunit: membrane component of ABC
           superfamily [Carnobacterium sp. AT7]
 gi|328956822|ref|YP_004374208.1| cystine ABC transporter [Carnobacterium sp. 17-4]
 gi|159874936|gb|EDP69003.1| predicted transporter subunit: membrane component of ABC
           superfamily [Carnobacterium sp. AT7]
 gi|328673146|gb|AEB29192.1| cystine ABC transporter [Carnobacterium sp. 17-4]
          Length = 214

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 112/205 (54%), Gaps = 18/205 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  ++GI++++     +R    K  +A+   Y+S  +I G PTLV I + Y         
Sbjct: 28  FGSLIGIIVAI-----ARLKGNKAIQAVARGYVS--IIRGTPTLVQIIIIY--------Y 72

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G  +F  G ++ P   + +IALS    A+++E +R  L ++P+GQMEAA A G+T  +A 
Sbjct: 73  GLVDF--GISLDP-LPAAFIALSVNNGAYLSESIRGALQSIPKGQMEAAYATGMTPWQAM 129

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA+R  IPP+ + ++ +LK +SL   +   +L+     +I Q    +   L   
Sbjct: 130 RRIILPQAIRIAIPPVGNTFIGMLKETSLVSVISVTELLRSAQLLIAQYYSYMPFYLGIA 189

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            IY  +S + +  +N+L A++++ E
Sbjct: 190 VIYWIMSTVFSFLLNKLEARMSIYE 214



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +P+    +Y T +L+  V+ F+         ++IG +V   RL  NK +  + R YV + 
Sbjct: 8   IPFLLQGAYYT-LLITLVSMFF--------GSLIGIIVAIARLKGNKAIQAVARGYVSII 58

Query: 137 RNIPPLVVIFFLYKSV----LSVLPIPDHSIVL 165
           R  P LV I  +Y  +    +S+ P+P   I L
Sbjct: 59  RGTPTLVQIIIIYYGLVDFGISLDPLPAAFIAL 91


>gi|299067958|emb|CBJ39172.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CMR15]
          Length = 227

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 77/125 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      +D  +    I  + G+ +E++L   F Y  +    ++ + R
Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKR 220

Query: 388 LNAKI 392
           L  K+
Sbjct: 221 LQKKV 225


>gi|187921592|ref|YP_001890624.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187720030|gb|ACD21253.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 245

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 1/131 (0%)

Query: 265 EFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           +F+S+ I +L  YT + I E VR+G+ A+PRGQ +A  ALGLT  +  R VLLP   R+I
Sbjct: 109 QFLSVSIFSLGIYTGSRICEQVRAGIQALPRGQFDAGFALGLTRAQTYRYVLLPVTFRTI 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + PLTS++L + KNS++A  +G  +L      +++ T Q  E  +     Y++L+  I  
Sbjct: 169 LGPLTSEFLIISKNSAVASTIGLLELSGQARQLVDYTAQPYESFICVTLAYMALNFAILH 228

Query: 384 FMNRLNAKIAL 394
            MN +  +  L
Sbjct: 229 GMNWIRRQTRL 239


>gi|331015650|gb|EGH95706.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 185

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 17/178 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PLL + T+    +P      L++    D P+               F S  +A   +
Sbjct: 25  RSIPLLLVITWFYLAVP----FVLRWITGEDTPI-------------GAFASCVVAFMMF 67

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+  EIVR+G+ ++ +GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +
Sbjct: 68  EAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQ 127

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL   VG  D ++   +  +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 128 DTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV 185


>gi|29828503|ref|NP_823137.1| glutamate transporter permease [Streptomyces avermitilis MA-4680]
 gi|29605606|dbj|BAC69672.1| putative glutamate ABC transporter permease [Streptomyces
           avermitilis MA-4680]
          Length = 214

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 76/122 (62%), Gaps = 2/122 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VPRGQ EAA +LG+T  +   +V+LPQA RS+I P+ S 
Sbjct: 89  LALGCYTSAFICEALRSGINTVPRGQGEAARSLGMTFEQTLSVVVLPQAFRSVISPVGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
            + L KNS++A A    +L+    T +++ G  I    +W+ + YL +++ I+   N L 
Sbjct: 149 LIALAKNSAIAGAFSVNELLGTYKT-LSELGYNIVWTFVWIAVGYLIITLTISAIFNFLE 207

Query: 390 AK 391
            +
Sbjct: 208 RR 209


>gi|326938358|gb|AEA14254.1| glutamine transport system permease protein glnP [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 221

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 66/89 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A   ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK++SLAV +   +L+     I  Q
Sbjct: 153 FISLLKDTSLAVVISLPELMHNAQIISGQ 181


>gi|15675409|ref|NP_269583.1| putative amino acid ABC transporter permease [Streptococcus
           pyogenes M1 GAS]
 gi|71911051|ref|YP_282601.1| arginine transporter permease [Streptococcus pyogenes MGAS5005]
 gi|94988863|ref|YP_596964.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94990763|ref|YP_598863.1| arginine ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|94992753|ref|YP_600852.1| arginine ABC transporter permease [Streptococcus pyogenes MGAS2096]
 gi|94994741|ref|YP_602839.1| Arginine transport system permease protein artQ [Streptococcus
           pyogenes MGAS10750]
 gi|139473469|ref|YP_001128185.1| putative amino acid ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
 gi|209559673|ref|YP_002286145.1| Putative amino acid ABC transporter [Streptococcus pyogenes NZ131]
 gi|306827045|ref|ZP_07460343.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pyogenes ATCC 10782]
 gi|13622596|gb|AAK34304.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes M1 GAS]
 gi|71853833|gb|AAZ51856.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS5005]
 gi|94542371|gb|ABF32420.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94544271|gb|ABF34319.1| Arginine transport system permease protein artQ [Streptococcus
           pyogenes MGAS10270]
 gi|94546261|gb|ABF36308.1| Arginine transport system permease protein artQ [Streptococcus
           pyogenes MGAS2096]
 gi|94548249|gb|ABF38295.1| Arginine transport system permease protein artQ [Streptococcus
           pyogenes MGAS10750]
 gi|134271716|emb|CAM29949.1| putative amino acid ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
 gi|209540874|gb|ACI61450.1| Putative amino acid ABC transporter [Streptococcus pyogenes NZ131]
 gi|304430791|gb|EFM33802.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pyogenes ATCC 10782]
          Length = 228

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269
           K     PL ++    ++   G P +V I + +  +HF+         IG   +  +F  L
Sbjct: 42  KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 96

Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I +S  + A+I+EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P 
Sbjct: 97  LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 156

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ ++K+S+L   +G  +L +   +++  T   I  +L+  F YL ++ ++A  + 
Sbjct: 157 LGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLA 216

Query: 387 RLNAKIA 393
            L   +A
Sbjct: 217 VLERHMA 223


>gi|145224552|ref|YP_001135230.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145217038|gb|ABP46442.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium gilvum PYR-GCK]
          Length = 291

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 31/224 (13%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V + +LG VL +   RLS H         P+ ++S+ L+     +P L+++
Sbjct: 71  TLTAAAVSIVLALILGFVLGV--GRLSTH--------TPIRWVSSVLVEFFRAVPVLIMM 120

Query: 239 ALKYQLH-----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
              Y L+     F    L     I G             L+ Y  A IAEIVR+G+ A+P
Sbjct: 121 IFAYFLYAFYDVFPSKYLALAGVITG-------------LTLYNGAVIAEIVRAGVHALP 167

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA+ ALGLT  +  R +LLPQA+ S++P L SQ + +LK+++L   + F ++V  G
Sbjct: 168 RGQAEASSALGLTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDTALGYQITFVEMVRQG 227

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I +  G  I  +++   + ++L+  ++ F   L  ++    K
Sbjct: 228 TVIGSAYGNYIPALIVIAVLMIALNFSLSWFATWLEKRMRRSRK 271



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L ER     ++   P+ +   + T +L G   T   A   ++ A I+G ++G GRLS + 
Sbjct: 40  LDERGQLTAEK-WEPFLTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGVGRLSTHT 98

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149
            + W+  V VE FR +P L+++ F Y
Sbjct: 99  PIRWVSSVLVEFFRAVPVLIMMIFAY 124


>gi|242279754|ref|YP_002991883.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122648|gb|ACS80344.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 222

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 31/195 (15%)

Query: 206 RLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +LSR+F        + +  +  P+L  + FL +G+P  + + +                 
Sbjct: 46  KLSRNFFTRKIAGVYVEAIRGTPMLVQAMFLYYGVPMAIGMRI----------------- 88

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                 P   +  I ++  + A+IAEIVR  + ++ +GQ EA  ++GLT+ +  R ++ P
Sbjct: 89  ------PPMTAGIIIIAVNSGAYIAEIVRGAVQSINKGQFEAGRSIGLTNTQTMRFIIWP 142

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA++ +IPPL +Q++  LK++SL + +G  +L+  G  I +   +A E+ L    +YL +
Sbjct: 143 QALKRMIPPLGNQFIISLKDTSLLMVIGVGELMRTGQEITSVNFRAFEVYLAVACVYLVM 202

Query: 378 SIMIALFMNRLNAKI 392
           ++ IA  M R+  K+
Sbjct: 203 TLSIAFAMRRIEKKL 217


>gi|331015347|gb|EGH95403.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 277

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   I  S  S E++   IAL    AA+ +E +RSGL 
Sbjct: 113 VPTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLR 169

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 170 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 229

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 230 YATREVENYTFRTFEAYLVATVVYLAIS 257


>gi|170742665|ref|YP_001771320.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196939|gb|ACA18886.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 230

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 21/182 (11%)

Query: 231 GLPTLVLIALKY--------------QLHFDKPVLGQFNFIGGSTVSP----EFMSLYIA 272
           GLP L L+A  Y                +F  P LGQ+  IG     P     F S  + 
Sbjct: 50  GLPVLPLVAKGYVNFMRSLPLVLVIFWFYFLVPYLGQW-LIGAE--RPIQVGAFTSSLVT 106

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            + + AA+ +EI+R+G+ ++P+GQ  AA ALGLT+ ++   V+LPQA R+++P L +Q +
Sbjct: 107 FTLFEAAYFSEIMRAGIQSIPKGQAAAASALGLTYWQSMGSVILPQAFRNMLPVLLTQTI 166

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L +++SL   +   D +     +  + G+ +E+ L    +Y ++  + ++ + RL  +I
Sbjct: 167 VLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEMYLFAALVYFAICFLASILVRRLQRRI 226

Query: 393 AL 394
           A+
Sbjct: 227 AI 228


>gi|322833173|ref|YP_004213200.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168374|gb|ADW74073.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 222

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 18/208 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF  +LG VL+L   RLS HF        PL ++S F +       LIA  + +++  P 
Sbjct: 31  VFGLILGFVLALM--RLS-HFW-------PLSWLSRFYVSVFRGTPLIAQLFMIYYGLP- 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             QF    G  + P   +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+   + 
Sbjct: 80  --QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMNPWQT 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA R+ +PPL + ++ L+K++SLA  +   +L      + ++T +   + L  
Sbjct: 133 MRRVILPQAARTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLVTSRTLEVFTMYLAA 192

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             IY  L+ +++   NRL  ++  ++++
Sbjct: 193 SVIYWVLATVLSFLQNRLEDRVNRQDQE 220



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM+   I+G ++   RLS    ++W+ R YV VFR  P +  +F +
Sbjct: 15  LLKGTLFTLQLSLGGMVFGLILGFVLALMRLSHFWPLSWLSRFYVSVFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107


>gi|319782257|ref|YP_004141733.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168145|gb|ADV11683.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 313

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 15/207 (7%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV----- 236
           T+   A I + + V+G V+++     S       G     LY+  F   G+P L+     
Sbjct: 77  TLMLTAVIMILAIVVGTVIAIMRVSPSPVLRAFAG-----LYVWFFR--GVPALIQLIFW 129

Query: 237 --LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             L  L  ++    P +G    +  +     F S  +ALS   A ++AEI+R+G+ +VP 
Sbjct: 130 FNLSLLVREVSLTIPFVGTLFSVRTNDFMTPFFSAVVALSLCEAGYMAEIIRAGIKSVPS 189

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALG+ +R   + + LPQAMR ++PP  ++ +NLLK +SL   +   DL     
Sbjct: 190 GQAEAASALGMPYRMILKRITLPQAMRFVLPPTGNEAINLLKMTSLVTFIAVDDLFYSAQ 249

Query: 355 TIINQTGQAIEIILIWMFIYLS-LSIM 380
           +I  +T + I ++++  F YL+ +SIM
Sbjct: 250 SIYARTFETIPLLIVVAFWYLAVVSIM 276


>gi|206967600|ref|ZP_03228556.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus AH1134]
 gi|229188623|ref|ZP_04315662.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 10876]
 gi|206736520|gb|EDZ53667.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus AH1134]
 gi|228594812|gb|EEK52592.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 10876]
          Length = 230

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHIYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        SP F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 214


>gi|290580364|ref|YP_003484756.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254997263|dbj|BAH87864.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 217

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 18/230 (7%)

Query: 169 MFLNN----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           MF+N     + LSF    +     I V SF+ G +L +F + L R       ++L  +YI
Sbjct: 1   MFINFHLIIKSLSFVLTGIPYTLGISVLSFLTGCLLGIFISFL-RMSQNSWLRSLARIYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  ++ G+P LV++   + L+F  P                 +  YI  S  +AA+I+EI
Sbjct: 60  S--IMRGVPMLVVL---FVLYFGLPYF--------EVQLSALLCAYIGFSAVSAAYISEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ + AV +GQ EAA ALGL      + ++LPQA R  I PL +  L++LK+SSLA  +
Sbjct: 107 FRASVSAVDKGQWEAARALGLPMTSILKSIILPQAFRIAIAPLGNVMLDILKSSSLAAMI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              D+      I  +    + + ++  FIY  L  +  +F N L AK+++
Sbjct: 167 TVPDIFQNAKIIGGREYDYMSMYILIAFIYWLLCFLFEMFQNHLEAKLSV 216


>gi|229068107|ref|ZP_04201414.1| Amino acid ABC transproter, permease [Bacillus cereus F65185]
 gi|229077711|ref|ZP_04210341.1| Amino acid ABC transproter, permease [Bacillus cereus Rock4-2]
 gi|229176944|ref|ZP_04304339.1| Amino acid ABC transproter, permease [Bacillus cereus 172560W]
 gi|228606419|gb|EEK63845.1| Amino acid ABC transproter, permease [Bacillus cereus 172560W]
 gi|228705652|gb|EEL58008.1| Amino acid ABC transproter, permease [Bacillus cereus Rock4-2]
 gi|228714921|gb|EEL66789.1| Amino acid ABC transproter, permease [Bacillus cereus F65185]
          Length = 251

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 29  TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHIYIA--IIRGTP 84

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        SP F +  IAL+ +  A+I EI R  + +V 
Sbjct: 85  LIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 192

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 193 LSIAAGNFQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 235


>gi|228950910|ref|ZP_04113032.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228808758|gb|EEM55255.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 251

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 117/224 (52%), Gaps = 21/224 (9%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGL 232
           ++PTL   T    ++ + S VLG ++ L     R+S   + K   ++  +YI+  +I G 
Sbjct: 29  TYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFFRIS---NNKVLNSIAHIYIA--IIRGT 83

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V IA+ Y           F        SP F +  IAL+ +  A+I EI R  + +V
Sbjct: 84  PLIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSV 131

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   
Sbjct: 132 DRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGS 191

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 192 GLSIAAGNFQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 235


>gi|121610275|ref|YP_998082.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554915|gb|ABM59064.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 217

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 11/168 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + L +   F  P+LG         VSP +++  IAL   T+AF+ EI R  + 
Sbjct: 61  GTPLLMQLFLAF---FGAPILG-------FEVSP-WLAASIALILNTSAFLGEIWRGCIQ 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EAA ALGL +    RLV+LPQA +  +PP     + +LK +SLA  +GF ++ 
Sbjct: 110 AIPKGQWEAAYALGLNYVPRMRLVVLPQAWQIALPPTVGYLVQVLKGTSLAAIIGFTEIT 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G  I N T Q + +  +   IY +L   ++L   R+  ++ L   +
Sbjct: 170 RAGQIINNATFQPLIVFSVVGAIYFALCWPLSLLAGRMERQLKLATTR 217


>gi|17545202|ref|NP_518604.1| glutamate/aspartate transmembrane ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17427493|emb|CAD14011.1| probable glutamate/aspartate transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 227

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 77/125 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      +D  +    I  + G+ +E++L   F Y  +    ++ + R
Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKR 220

Query: 388 LNAKI 392
           L  K+
Sbjct: 221 LQKKV 225



 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 15/71 (21%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           ATAILVG V   W            GTL+   RLS  K + W  + YV +FR+IP ++V+
Sbjct: 30  ATAILVGIV---W------------GTLLAMMRLSGIKPLQWFGQAYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSVL 156
            + +  V  VL
Sbjct: 75  LWFFLIVPQVL 85


>gi|56807954|ref|ZP_00365770.1| COG0765: ABC-type amino acid transport system, permease component
           [Streptococcus pyogenes M49 591]
          Length = 227

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 104/187 (55%), Gaps = 12/187 (6%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269
           K     PL ++    ++   G P +V I + +  +HF+         IG   +  +F  L
Sbjct: 41  KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 95

Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I +S  + A+I+EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P 
Sbjct: 96  LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 155

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ ++K+S+L   +G  +L +   +++  T   I  +L+  F YL ++ ++A  + 
Sbjct: 156 LGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLA 215

Query: 387 RLNAKIA 393
            L   +A
Sbjct: 216 VLERHMA 222


>gi|56962547|ref|YP_174273.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908785|dbj|BAD63312.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 217

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 84/134 (62%), Gaps = 2/134 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP F++  +AL+ +  A I+EI+RSGL ++P+GQ+EAA + GLT+ +  R +L+PQ
Sbjct: 83  GFQVSP-FVAAIVALTVFEGAMISEIIRSGLNSIPKGQIEAARSSGLTYTQTLRAILIPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSL 377
           A R ++PP  SQ++ LLK++SLAV +   +++     +      ++  IL ++ + Y  +
Sbjct: 142 AARKMMPPTVSQFIALLKDTSLAVIITLPEVMHHARILSAHNSNSVFAILFFVAVMYFVV 201

Query: 378 SIMIALFMNRLNAK 391
           +  ++    +L AK
Sbjct: 202 NFALSKIAKKLEAK 215


>gi|330967849|gb|EGH68109.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 219

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + LS + A+ + E++R GL ++PRGQ EA +A+GL   +    VLLPQA++ +
Sbjct: 88  PAFWCAVLVLSLWGASEVGEVMRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRL 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PP+ + Y  L+K SSLAV +G  D+  VG  II +T    E +LI+ F++L
Sbjct: 148 TPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERT---YESVLIYGFLFL 196


>gi|289671692|ref|ZP_06492582.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 237

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   I  +  S E++   IAL    AA+ +E +RSGL 
Sbjct: 73  VPTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 129

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 130 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 189

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 190 YATREVENYTFRTFEAYLVATVVYLAIS 217


>gi|732704|emb|CAA57063.1| gluD [Corynebacterium glutamicum]
          Length = 273

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 94/166 (56%), Gaps = 11/166 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  VFS +L +V+   A  L R    +  +    + I TF    +P L+L+   YQ+   
Sbjct: 35  KSAVFSVILALVMGT-ALGLGRISEIRILRWFCAVIIETFR--AIPVLILMIFAYQM--- 88

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                Q+N +  S +   F ++   L+ Y  + IAEI+ SG+ ++P+GQ EAAIALG++ 
Sbjct: 89  ---FAQYNIVPSSQLV--FAAVVFGLTMYNGSVIAEILCSGIASLPKGQKEAAIALGMSS 143

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R+ T  +LLPQA+ +++P L SQ +  LK+S+L   +G+ ++V  G
Sbjct: 144 RQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQIGYIEVVRSG 189



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 3/99 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+ +  ++ T IL G   T   A   +I A ++GT +G GR+S  +++ W C V +E FR
Sbjct: 15  PFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIETFR 74

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLP---FGMFLNN 173
            IP L+++ F Y+       +P   +V     FG+ + N
Sbjct: 75  AIPVLILMIFAYQMFAQYNIVPSSQLVFAAVVFGLTMYN 113


>gi|330980534|gb|EGH78637.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 233

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   I  +  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213


>gi|228919286|ref|ZP_04082656.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228840393|gb|EEM85664.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 251

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 29  TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHIYIA--IIRGTP 84

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        SP F +  IAL+ +  A+I EI R  + +V 
Sbjct: 85  LIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 192

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 193 LSIAAGNFQQLDTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 235


>gi|282861062|ref|ZP_06270127.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282563720|gb|EFB69257.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 322

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 5/171 (2%)

Query: 231 GLPTLVLIALKYQLHFDKPVLG-QFNFIGGST-VSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P  V + L + L    P+L   F +    T V   FM   + L    AA++AEI R+G
Sbjct: 126 GTPVYVQLLLWFNLALVFPILNIPFVYKDEMTDVMTPFMCALLGLGLNEAAYMAEICRAG 185

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  GQ EA+ ALG+T  K  R V+LPQA+R IIPP  ++++N+LK SSL  AV + +
Sbjct: 186 IQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVIIPPTGNEFINMLKTSSLVYAVTYNE 245

Query: 349 LVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+     I + +   +E++    IW  +  S+  +   ++ R  A+ +L+ 
Sbjct: 246 LLRSTSQIGSTSYAVMEMLFVASIWYIVMTSIFSVGQYYLERRYARGSLRS 296


>gi|262044227|ref|ZP_06017295.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038418|gb|EEW39621.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 254

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 75/126 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++ +GQMEA+ ALG+   K  R V+L QA R I+P
Sbjct: 122 FLSCIVAITLNAGAYVSEIFRAGIQSIDKGQMEASRALGMPWWKTMRKVILLQAFRRILP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ ++A  +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLV 241

Query: 386 NRLNAK 391
           NRL  +
Sbjct: 242 NRLEKR 247


>gi|6560693|gb|AAF16724.1|AF141644_1 putative integral membrane protein [Lactococcus lactis]
          Length = 191

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 31/170 (18%)

Query: 167 FGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKT 215
           FG+  NN     RGL    +T++     F+ + ++GI+  LF+   S+        +   
Sbjct: 41  FGILQNNWEQIGRGL---LVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDL 97

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +++PLL ++ F+ +G+P L+ I   +Q   +                 EF +  IAL+ 
Sbjct: 98  NRSIPLLVLTIFIFYGIPNLLQIITGHQSPLN-----------------EFTAGVIALTL 140

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP
Sbjct: 141 NSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIP 190



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA    I A I+G + G   ++ +K++  I R+YV++ R+IP LV+  F++  
Sbjct: 54  GLLVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDLNRSIPLLVLTIFIFYG 113

Query: 152 VLSVLPI 158
           + ++L I
Sbjct: 114 IPNLLQI 120


>gi|78358109|ref|YP_389558.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220514|gb|ABB39863.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 292

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 77/130 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+ Y  A+IAEIVR+G+ +VPRGQ EA+ +LG       RLV+ PQA++ IIP
Sbjct: 162 FTAGVLTLAIYEGAYIAEIVRAGVESVPRGQWEASASLGFGRFDMLRLVIFPQALKVIIP 221

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  Q+++ +K+S++   +   +L   G  ++  T +  E+      +YL L++  +L  
Sbjct: 222 PLAGQFISTIKDSAIVSVISVQELTFQGLELMASTFRTFEVWTTIALLYLMLTLFCSLLA 281

Query: 386 NRLNAKIALK 395
            ++ A++  +
Sbjct: 282 RKVEARLRWR 291



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)

Query: 68  AGFE-----IDQGIVPYTSDSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           AG++     I Q    + + + +   +LV G + T  L+    + A + GTL G  R+S 
Sbjct: 34  AGYDWQWHVIWQYFFRHDAQAGWVPNLLVQGLLTTIRLSIWATLLAVVFGTLAGLARVSR 93

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++L   + R YVE  RN+PPLV++F  Y
Sbjct: 94  SRLRRMLARTYVESVRNLPPLVLVFIFY 121


>gi|229083879|ref|ZP_04216188.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-44]
 gi|228699457|gb|EEL52133.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-44]
          Length = 214

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 3/94 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL++ +    ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYAQTLWYIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++LLK++SLAV +   +L+     IIN  GQ +
Sbjct: 153 FISLLKDTSLAVVISLPELMH-NAQIIN--GQNV 183



 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 34/54 (62%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  +A   ++ + IIG++VG  R +   +V+ +  + VE+ RN+P L++IFF Y
Sbjct: 22  TLEIAVIAILLSFIIGSVVGTLRYTKIPVVSQLLALIVEIIRNLPLLLIIFFTY 75


>gi|310642316|ref|YP_003947074.1| amino acid abc transporter, permease protein, his/glu/gln/arg/opine
           family [Paenibacillus polymyxa SC2]
 gi|309247266|gb|ADO56833.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Paenibacillus polymyxa SC2]
          Length = 487

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 23/205 (11%)

Query: 191 VFSFVLGIVLSLFATRLSR-HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +F F++G+++SL   R+S     E  G A    Y+   ++ G P LV + +   +H+   
Sbjct: 297 LFGFIIGLIISLL--RMSGIRIIEWLGTA----YVE--ILRGTPMLVQLMI---IHYGVA 345

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +    NF      +P   S  I LS  ++A++AEI R+G+ AV RGQMEAA +LG+   K
Sbjct: 346 LTLGVNF------TP-LQSGIITLSLNSSAYLAEIFRAGIQAVDRGQMEAARSLGMGRGK 398

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+LPQA +SI+P + ++++ ++K SS+   +G  D++     I N T + +   +I
Sbjct: 399 AMRHVILPQAFKSILPAIGNEFITIIKESSIISTIGMVDIMYQAQVIKNITYEGLSPFVI 458

Query: 370 WMFIY----LSLSIMIALFMNRLNA 390
              IY     SLS ++ L+  +L A
Sbjct: 459 AAAIYFVMTFSLSKLLGLWERKLRA 483


>gi|322376376|ref|ZP_08050869.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282183|gb|EFX59190.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 227

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 118/210 (56%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+         F +++ K  PL++ +   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLA---------FGQRS-KFKPLVWFANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 83  I-QVGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 138 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +     ++   +KK
Sbjct: 198 FAAFYYLIMTSILTVALKAFEKRMGQGDKK 227


>gi|308069275|ref|YP_003870880.1| Probable amino-acid ABC transporter extracellular binding protein
           yqiX precursor [Paenibacillus polymyxa E681]
 gi|305858554|gb|ADM70342.1| Probable amino-acid ABC transporter extracellular binding protein
           yqiX precursor [Paenibacillus polymyxa E681]
          Length = 487

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 111/204 (54%), Gaps = 21/204 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++G+++SL      R    +  + L   Y+   ++ G P LV + +   +H+   +
Sbjct: 297 LFGFIIGLIISLL-----RMSGVRIIEWLGTTYVE--ILRGTPMLVQLMI---IHYGVAL 346

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               NF      +P   S  I LS  ++A++AEI R+G+ AV RGQMEAA +LG+   KA
Sbjct: 347 TLGVNF------TP-LQSGIITLSLNSSAYLAEIFRAGIQAVDRGQMEAARSLGMGRGKA 399

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA +SI+P + ++++ ++K SS+   +G  D++     I N T + +   +I 
Sbjct: 400 MRHVILPQAFKSILPAIGNEFITIIKESSIISTIGMVDIMYQAQVIKNITYEGLSPFVIA 459

Query: 371 MFIY----LSLSIMIALFMNRLNA 390
             IY     SLS ++ L+  +L A
Sbjct: 460 AAIYFVMTFSLSKLLGLWERKLRA 483


>gi|154508733|ref|ZP_02044375.1| hypothetical protein ACTODO_01241 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798367|gb|EDN80787.1| hypothetical protein ACTODO_01241 [Actinomyces odontolyticus ATCC
           17982]
          Length = 320

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 23/182 (12%)

Query: 224 ISTFLIFG--LPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCY 276
           I T LIF   LPTL       +L F  P LG     +  F   +  +P +M+ +I L   
Sbjct: 111 IYTQLIFWSLLPTLYP-----KLSFGVPFLGSLWGWELTFDTATYFTPFWMA-FIGLGLN 164

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEI+R+GL++VP+GQ EAA ALG+      R ++LPQAMR I+PP+ ++ +++LK
Sbjct: 165 EGAYLAEIMRAGLLSVPKGQWEAATALGMPRGTIFRRIILPQAMRVIVPPIGNETISMLK 224

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL---IWMFIYLSLSIMIALFMNRLN 389
            +SL  A+ F   ++    I  Q GQA    + +++   IW  +  SL + I  F+ +  
Sbjct: 225 TTSLVSAIPFTLELTF---IARQRGQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEKYY 281

Query: 390 AK 391
            K
Sbjct: 282 GK 283


>gi|319944973|ref|ZP_08019235.1| amino acid ABC superfamily ATP binding cassette transporter
           transmembrane protein [Lautropia mirabilis ATCC 51599]
 gi|319741543|gb|EFV93968.1| amino acid ABC superfamily ATP binding cassette transporter
           transmembrane protein [Lautropia mirabilis ATCC 51599]
          Length = 262

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 81/134 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+    A+ AE +R+GL+AVPRGQ EAA +LGL++      V+ PQA +  +
Sbjct: 128 DFTSACVALAFNAGAYNAESIRAGLLAVPRGQTEAARSLGLSNWHTFWDVIFPQAFKIAL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL + ++ LLK+SSLA A+G  +L +V   I + T Q I  ++    IYL L+ ++   
Sbjct: 188 PPLVNNFIALLKDSSLAYAIGVVELTNVANRIQSSTFQPIPPLVTAAVIYLLLTTVLTQI 247

Query: 385 MNRLNAKIALKEKK 398
              +  ++ ++ ++
Sbjct: 248 STAVEHRMDVEGRQ 261


>gi|258405216|ref|YP_003197958.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257797443|gb|ACV68380.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 227

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 33/208 (15%)

Query: 192 FSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F F+LG+   L   RLS+          + ++ +  PL+    FL FGLP    +AL  +
Sbjct: 36  FGFILGVTAGLL--RLSKVTAIKKVSGIYVESVRGTPLMVQVMFLYFGLP----MALGMR 89

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +                   P   +  +A++  + A+IAEIVR  + ++  GQ+EA  ++
Sbjct: 90  I-------------------PPLTAGIVAIAVNSGAYIAEIVRGAVQSIEPGQVEAGRSI 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R ++ PQA + +IPPL +Q++  LK++SL V +G  +L   G  II    +A
Sbjct: 131 GLTAPQTMRYIVWPQAFKRMIPPLGNQFIISLKDTSLLVVIGVGELTRSGQEIIAVNFRA 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E+ L    +YL++++ I+ F+  + ++
Sbjct: 191 FEVWLTVAVMYLAITMGISKFLRIIESR 218


>gi|171778684|ref|ZP_02919780.1| hypothetical protein STRINF_00632 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282641|gb|EDT48065.1| hypothetical protein STRINF_00632 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 228

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 105/178 (58%), Gaps = 14/178 (7%)

Query: 223 YISTFLIF---GLPTLVLIALKYQ-LHF-DKPVLGQFNFIGGSTVSPEFMSLY---IALS 274
           +I++F ++   G P +V I + +  +HF + P       IG   +  +F  L    I +S
Sbjct: 51  WIASFYVWVFRGTPMVVQIMIAFAWMHFSNAPT------IGFGVLDLDFSRLLPGIIIIS 104

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             + A+I+EIVR+G+ AVP+GQ+EAA +LG+    A R V+LPQA+++I+P L ++++ +
Sbjct: 105 LNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITI 164

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K+SSL   +G  +L +   +++  T   I  +L   F YL ++ +++  + +L  ++
Sbjct: 165 IKDSSLLQTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVLSFLLKKLENRM 222


>gi|239983305|ref|ZP_04705829.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 214

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 78/128 (60%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E +RSG+  VPRGQ EAA +LG+T  +    V+LPQA RS+I P+ S 
Sbjct: 89  LALGCYTSAFICEALRSGINTVPRGQGEAARSLGMTFGQTLSAVVLPQAFRSVIAPVGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KNS++A A    +L+    T +++ G  I    IW F++++L  +I      ++A
Sbjct: 149 LIALAKNSAIAGAFSVTELLGTYRT-LSELGYNI----IWTFVWIALGYLIITLT--ISA 201

Query: 391 KIALKEKK 398
              L EK+
Sbjct: 202 LFHLMEKR 209


>gi|254440026|ref|ZP_05053520.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198255472|gb|EDY79786.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 265

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 23/222 (10%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFL------------IFGLPTLVLIALKYQL 244
           GI +++F T +        G  L L+ +S F+            + G+P +VL+ L    
Sbjct: 44  GIWITVFVTLVGFTLAASIGLGLALMSMSRFIALRQIARLYTEIVRGVPIIVLL-LYVAF 102

Query: 245 HFDKPVLGQFNFIGG-----STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQ 296
                ++  FN+I G        + +F  L+   IAL+   +AFIAE+ R+GL ++ +GQ
Sbjct: 103 VLAPGMVALFNWITGILGFDPIRNRDFSLLWRAIIALTIGYSAFIAEVFRAGLQSIEKGQ 162

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALGL+  +  R ++ PQA R I+PPL + ++ ++K+SSL   +G  D+   G   
Sbjct: 163 IEAAEALGLSPWRRFRHIVFPQAFRRILPPLGNDFIAMVKDSSLVSVLGVLDVTQAGKIT 222

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +  E   +   IYL+++I ++L + RL  +  L+EK 
Sbjct: 223 AAGNFRYFETYNVVALIYLTMTIGLSLALRRLERQ--LREKS 262


>gi|77459313|ref|YP_348820.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77383316|gb|ABA74829.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 220

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 112/207 (54%), Gaps = 20/207 (9%)

Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           S  +G V+ L      LSRH   +  + L  +Y++  +I   P LVLI L Y   F  P 
Sbjct: 31  SIAIGCVIGLLMAFALLSRH---RALRVLASVYVT--VIRNTPILVLILLIY---FALPS 82

Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           LG + + I      P F+   I LS Y  A++ E+ R GL+++P+GQ EA +A+GL   +
Sbjct: 83  LGIRLDKI------PSFI---ITLSLYAGAYLTEVFRGGLLSIPKGQREAGLAIGLGEWQ 133

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V +P  +R+++P L++ +++L K++SLA A+   +L      I  ++ + IE  L+
Sbjct: 134 VKAYVTVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLV 193

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              +Y++   +IA+ +  L  ++A++ 
Sbjct: 194 TTALYVAACYLIAMLLRYLEQRLAIRR 220


>gi|27381500|ref|NP_773029.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354668|dbj|BAC51654.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 218

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 78/133 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+++ I  +   +AF+ EI R  + AVPRGQ EAA+ALGL +    R ++LPQA+R  +P
Sbjct: 86  FVAVAIGFTVNASAFLGEIWRGAIQAVPRGQTEAAMALGLHYSSRMRDIVLPQAIRISLP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  VGF +L   G  + NQT Q + +  +   +Y  L   ++ + 
Sbjct: 146 ATIGYLVQLIKGTSLAAIVGFIELARAGQIVSNQTFQPLLVFGVVGAMYFILCWPLSWWG 205

Query: 386 NRLNAKIALKEKK 398
           +R+ A++AL  ++
Sbjct: 206 SRMEARLALASQR 218


>gi|253990628|ref|YP_003041984.1| glutamate/aspartate transport system permease protein gltk
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782078|emb|CAQ85242.1| glutamate/aspartate transport system permease protein gltk
           [Photorhabdus asymbiotica]
          Length = 224

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 18/212 (8%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLS--RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            AKI + + V+GI   L+ T L+  R    K       LY++ F    +P LV++ L + 
Sbjct: 23  TAKITIIAVVVGI---LWGTALAVMRLSSVKVLSWFATLYVNLFR--SVP-LVMVLLWFY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L    P L Q N +G   +SP+     +S  +A + + AA+ +EI+R+G+ ++ RGQ  A
Sbjct: 77  LIV--PSLVQ-NVLG---ISPKTDIRLISAMVAFAFFEAAYYSEIIRAGIQSISRGQSSA 130

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+ALG+T  ++ RLV+LPQA R++ P L +Q + L +++SL   +  AD       I  +
Sbjct: 131 ALALGMTPMQSMRLVILPQAFRAMTPLLLTQGIVLFQDTSLVYVLSLADFFRTAANIGER 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  +E+IL    +Y  +SI  ++ +N L  +
Sbjct: 191 DGTQVEMILFAGLVYFIISIAASMLVNYLKKR 222



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++   + GT +   RLS+ K+++W   +YV +FR++P ++V+ + 
Sbjct: 16  LLQGLVITAKITIIAVVVGILWGTALAVMRLSSVKVLSWFATLYVNLFRSVPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD 160
           Y       ++VL + P  D
Sbjct: 76  YLIVPSLVQNVLGISPKTD 94


>gi|239944222|ref|ZP_04696159.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239990678|ref|ZP_04711342.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces roseosporus NRRL 11379]
 gi|291447694|ref|ZP_06587084.1| permease [Streptomyces roseosporus NRRL 15998]
 gi|291350641|gb|EFE77545.1| permease [Streptomyces roseosporus NRRL 15998]
          Length = 322

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 98/181 (54%), Gaps = 9/181 (4%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG---STVSPEFMSLYIALSCYTA 278
           LYI  +   G P  V + L + L    PVL    FI     + V   FM   + L+   A
Sbjct: 119 LYI--WFFRGTPVYVQLLLWFNLALIFPVL-NIPFIYKDEMTDVMTPFMCALLGLALNEA 175

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R+G+ +V  GQ EA+ ALG+T  K  R V+LPQA+R IIPP  ++++N+LK S
Sbjct: 176 AYMAEICRAGIQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVIIPPTGNEFINMLKTS 235

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALK 395
           SL  AV + +L+     I + +   +E++    IW  +  S+  +   ++ R  A+ +L+
Sbjct: 236 SLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSVFSVGQYYLERRFARGSLR 295

Query: 396 E 396
            
Sbjct: 296 S 296


>gi|238063457|ref|ZP_04608166.1| ABC amino acid transporter permease component [Micromonospora sp.
           ATCC 39149]
 gi|237885268|gb|EEP74096.1| ABC amino acid transporter permease component [Micromonospora sp.
           ATCC 39149]
          Length = 218

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 37/192 (19%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V S VLG +L         A R S   +    +  PL  +  FL+FG+P       K  +
Sbjct: 31  VGSLVLGTLLGAMRVSPVPALRASGATYVNIVRNTPLTLVFAFLVFGVP-------KLDV 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           + D                  F S  IAL+ YTAAF+ E++RSG+  V  GQ EAA ALG
Sbjct: 84  NIDY-----------------FDSACIALTVYTAAFVCEVIRSGVNTVGTGQAEAARALG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTG 361
           +T  +   L++LPQA+R+++PP+ S ++ +LKN++  +A GF+ L +  G I   +++ G
Sbjct: 127 MTFAQVLTLIVLPQALRAMVPPMMSVFIAMLKNTT--IAAGFSVLEA--GAIPSYMSERG 182

Query: 362 QAIEIILIWMFI 373
           +    +L+W+ I
Sbjct: 183 EPQFAVLLWITI 194


>gi|261823782|ref|YP_003261888.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607795|gb|ACX90281.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 242

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 114/223 (51%), Gaps = 11/223 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           SFP   +   A   V S + G+  ++  T L        G    LL +       +P ++
Sbjct: 17  SFPDGPLGGAALTLVMSLLAGVASAVLGTILGVALAMSRGVWSALLAMVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+ RGQ
Sbjct: 77  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LGL+  +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            N++    +E+ L    +Y    + + L  NR+N +   ++K+
Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLSLELLANRVNVRFNQQQKQ 229


>gi|218895475|ref|YP_002443886.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus G9842]
 gi|228899076|ref|ZP_04063348.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL
           4222]
 gi|228963460|ref|ZP_04124618.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|218541671|gb|ACK94065.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus G9842]
 gi|228796231|gb|EEM43681.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228860517|gb|EEN04905.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL
           4222]
          Length = 230

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 7   SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 66  VQIAILYFGITSVV 79


>gi|300718316|ref|YP_003743119.1| polar amino acid ABC transporter, permease protein [Erwinia
           billingiae Eb661]
 gi|299064152|emb|CAX61272.1| polar amino acid ABC transporter, permease protein [Erwinia
           billingiae Eb661]
          Length = 231

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 6/167 (3%)

Query: 215 TGKALPLLYISTFLIF--GLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYI 271
           T K L +  +S ++ +   +PTL+ + + Y   F  P +L +   +  +  + EF+    
Sbjct: 48  TNKRLAVFLVSAYVSYHRNVPTLIQLMMWY---FAIPTLLPESVQMWVNDFNAEFLFSMC 104

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    AA+ +E +RSGL A+P GQ EA+ ALG+++ ++ R V+LPQA+R+ +P L +  
Sbjct: 105 ALGLCQAAYFSEDIRSGLRAIPDGQNEASRALGMSYVRSMRSVILPQAIRNALPSLLNHT 164

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + L KN+SLA+ +G A+L  V   I NQT +  E  L+    YL  S
Sbjct: 165 VLLFKNTSLAMVIGVAELTYVTRDIENQTFRTFEAYLVASVGYLFFS 211


>gi|239813839|ref|YP_002942749.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239800416|gb|ACS17483.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 229

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 13/230 (5%)

Query: 173 NRGLSFPTLTMDTN--AKIFVFSFVLGIVLS----LFATRLS--RHFHEKTGKALPLLYI 224
           N  LSF    + +N   K F FS +L IV +    LF T L+  R   ++   A   +Y+
Sbjct: 3   NLDLSFYNWDVISNFVVKGFYFSIMLTIVATIGGVLFGTVLALMRLSGKRWLDAPAAIYV 62

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +   +  +P LV++ L + L         F  IG +  S   +S  I    + AA+ +EI
Sbjct: 63  NG--MRSIP-LVMVILWFFLLVPASFYAAFGSIGSNYRSE--ISAVITFIAFEAAYFSEI 117

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ ++PRGQ+ A  A+G+T+ +  RLV+LPQA R+++P L +Q + L +++SL  A+
Sbjct: 118 MRAGIQSIPRGQVNAGQAVGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAI 177

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D++    T     G+ IE  L+   +Y  +   ++  + RL+ KIA+
Sbjct: 178 GAYDMLKGFETAGKNFGRPIEAYLLAAVVYFIMCYALSWLVKRLHKKIAI 227


>gi|77459078|ref|YP_348584.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77383081|gb|ABA74594.1| amino acid ABC transporter membrane protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 292

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 98/175 (56%), Gaps = 2/175 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAE 283
           T+L  G P ++ + L + L    P +G        TVS    F++  + LS    A+ AE
Sbjct: 116 TWLFRGTPLILQLLLWFNLALIFPTIGIPGLFELDTVSLMTPFVAALLGLSINQGAYTAE 175

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR+GL++V  GQ EAA ++G+   +A R ++LPQAMR IIPP+ ++++ ++K +SLA  
Sbjct: 176 VVRAGLLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASV 235

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +++L+     I     + +E++++    YL+   +++   +RL  + A    K
Sbjct: 236 IQYSELLYNAQNIYYANARVMELLIVAGIWYLATVTVLSFGQSRLERRFARGAGK 290


>gi|253575035|ref|ZP_04852374.1| glutamine ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845491|gb|EES73500.1| glutamine ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 216

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 79/125 (63%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT++FIAE +R+G++A+P+GQ EAA + GL++ +    ++LPQA++ +IPPL +Q
Sbjct: 91  IGLAVYTSSFIAEAIRAGILAIPQGQTEAARSSGLSYVQTMLHIILPQAIKLVIPPLGNQ 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386
           ++NL+KNSS+   V   DL+     +   T +  +    + L ++ + L LS  + ++  
Sbjct: 151 FINLIKNSSVLTIVAGLDLMYFADIVNADTYRTFDTYIFVALFYLVLTLPLSYGVRVWER 210

Query: 387 RLNAK 391
           RL  K
Sbjct: 211 RLEKK 215



 Score = 36.2 bits (82), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 34/67 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y    L GF  T   +   ++ + ++G L+   R++  + + W    YVE  RNIP L
Sbjct: 7   TDYFDVYLEGFRGTVLSSLLALVGSFVLGALIAVFRIAPVRPLRWFGTGYVEFIRNIPLL 66

Query: 143 VVIFFLY 149
           +V++  Y
Sbjct: 67  LVVYIFY 73


>gi|228906126|ref|ZP_04070015.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL
           200]
 gi|228853535|gb|EEM98303.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL
           200]
          Length = 230

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 7   SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 66  VQIAILYFGITSVV 79


>gi|327534749|gb|AEA93583.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 237

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 7/131 (5%)

Query: 271 IALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           IA+ C   Y  A+I+E+VRSG+ AVPRGQ EAA + GLT+ +  R V+LPQA R ++PPL
Sbjct: 107 IAILCVGLYHGAYISEVVRSGIGAVPRGQFEAAYSQGLTYGQTMRYVILPQAWRIMLPPL 166

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T+Q +NL+KN+S    +  AD++    +  +     I    +  F+Y  L   +A     
Sbjct: 167 TNQVVNLIKNTSTVAIISGADVMFAANSWSSVNLNYIPAFALAGFLYFILCFPLA----N 222

Query: 388 LNAKIALKEKK 398
           L  K+  K KK
Sbjct: 223 LARKMEEKNKK 233


>gi|237798755|ref|ZP_04587216.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331021608|gb|EGI01665.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 221

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 23/220 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T+   A   V   VLG  L+L     ++      G      +++PLL + T+    +P 
Sbjct: 19  MTLKLMAMGVVGGLVLGTALALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                L++    D P+               F S  +A   + AA+  EIVR+G+ ++ +
Sbjct: 78  ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   
Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +  G+A E ++I   +Y ++S   ++ + RL  + A+
Sbjct: 182 SSGDIIGRANEFLIIAGLVYFTISFAASVLVKRLQKRFAV 221



 Score = 42.7 bits (99), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   ++GT +   RLS+NKL+A +   YV  FR+IP L+VI + Y +
Sbjct: 16  GMVMTLKLMAMGVVGGLVLGTALALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75

Query: 152 VLSVL 156
           V  VL
Sbjct: 76  VPFVL 80


>gi|225862620|ref|YP_002747998.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|225789877|gb|ACO30094.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
          Length = 214

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP      LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                               ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQIISGQ 181



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|158319239|ref|YP_001511746.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158139438|gb|ABW17750.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 226

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 109/191 (57%), Gaps = 12/191 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F+  LG+VL +F   L R    K    +   Y+   +I G P LV I + Y   +  P++
Sbjct: 26  FTVALGVVLGIFLA-LMRISKNKILNFIGTAYVE--IIRGTPLLVQIFIVY---YGLPMM 79

Query: 252 G----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           G      +F+G  +   EF++  IALS  + A++AEI+RSG+ +V +GQMEAA +LG+ +
Sbjct: 80  GFKIPALSFLG--SAGEEFIAGIIALSINSGAYVAEIIRSGIQSVDKGQMEAARSLGMPY 137

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
             A + +++PQA ++I+P L ++++ ++K SS+   +G  +L+    T+   T   +E +
Sbjct: 138 PMAMKHIIIPQAFKNILPALGNEFIVVIKESSVMSVIGIHELMYNANTVRGNTFIPLEPL 197

Query: 368 LIWMFIYLSLS 378
           ++   IY  L+
Sbjct: 198 IVAAGIYFILT 208



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 6/95 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    ++G  NT  LAF  +    ++G  +   R+S NK++ +I   YVE+ R  P LV
Sbjct: 8   KYYQFFIIGAKNTVLLAFFTVALGVVLGIFLALMRISKNKILNFIGTAYVEIIRGTPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
            IF +Y        +P     +P   FL + G  F
Sbjct: 68  QIFIVYYG------LPMMGFKIPALSFLGSAGEEF 96


>gi|323127705|gb|ADX25002.1| Putative amino acid ABC transporter [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 228

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 123/219 (56%), Gaps = 20/219 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFL-IF-GLPTLVL 237
           +T+  +A +  F  ++G++++L           K  +  PL + ++T++ IF G P +V 
Sbjct: 19  VTIMISASVVFFGTIIGVLVTLI----------KRTQIKPLTWLVNTYVWIFRGTPMVVQ 68

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPR 294
           I + +   +      Q   IG   ++ +F  L    I +S  + A+I+EIVR+G+ AVP+
Sbjct: 69  IMIAFAWMY----FNQMPTIGFGVLNLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPK 124

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA +LG+  R A R V+LPQA ++I+P L ++++ ++K+S+L   +G  +L +   
Sbjct: 125 GQLEAAYSLGIRPRNAMRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQ 184

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++   T   I  +L+  F YL ++ +++  +  L  ++A
Sbjct: 185 SVATATYSPIAPLLVAAFYYLMVTTVLSQLLAVLERRMA 223


>gi|323700540|ref|ZP_08112452.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323460472|gb|EGB16337.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 292

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 113/200 (56%), Gaps = 10/200 (5%)

Query: 189 IFVFSFVLGIVLSL-FAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I V S ++G++L + FA  RLS++      +    LYI  +L  G P  + + + + L  
Sbjct: 62  ITVCSMIVGLILGVVFAVMRLSKN---PVTRWFSGLYI--WLFRGTPVYLQLLIWFNLAL 116

Query: 247 DKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P+  LG   +     ++P F++    L     A++ EIVRSG+++V +GQ++AA  LG
Sbjct: 117 IFPIVNLGFAEYRMVDVMTP-FVAALFGLGLNEGAYMTEIVRSGILSVDKGQVDAATTLG 175

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T   A R ++LPQAMR I+PP+ ++++ LLK SS+A A+ F +L+     I     + +
Sbjct: 176 MTRLTAMRRIVLPQAMRVIVPPVGNEFIGLLKTSSMASAIAFTELLHRAQLIYFVNAKVM 235

Query: 365 EIILIWMFIYLSLSIMIALF 384
           E++++    YL +  +++ F
Sbjct: 236 ELLIVATGWYLIVVTLLSFF 255


>gi|322834313|ref|YP_004214340.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169514|gb|ADW75213.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 274

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 78/128 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A++AE +RSG+++VPRGQ EAA+ALG++       V  PQA+R IIPP  S 
Sbjct: 147 IALSMNYGAYLAETIRSGVLSVPRGQQEAALALGVSRWTVAVHVTAPQALRIIIPPAGSM 206

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++++LK+SSL   +G  +L  +  +    T + +E++     IY  +SI++ L  +RL  
Sbjct: 207 FISMLKDSSLVSLMGLWELNFLAQSYGRSTYRYMEMLATAAAIYWIMSIVLELLQSRLER 266

Query: 391 KIALKEKK 398
           + A   ++
Sbjct: 267 RFAQGHRR 274


>gi|240850843|ref|YP_002972243.1| glutamate-aspartate ABC transporter permease component GltJ
           [Bartonella grahamii as4aup]
 gi|240267966|gb|ACS51554.1| glutamate-aspartate ABC transporter permease component GltJ
           [Bartonella grahamii as4aup]
          Length = 250

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 4/114 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +T+A IAE VRSG+ A+P GQ  AA+A+G T  ++ R ++LP+A+R+I+PPLTS+ 
Sbjct: 120 ALGFFTSARIAEQVRSGIEAIPSGQRYAAMAMGFTTYQSYRYIILPRAIRTIMPPLTSEA 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++KNSS+A AV   +L+      I +     E  L+   +Y    I+IALF+
Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQAIEEVSHVYENYLLVTILY----ILIALFV 229



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICR----VYVEVFRN 138
           +Y   +L G  NT  L+ + +I A + G ++G  R L    ++ +I R    ++VE+ RN
Sbjct: 28  TYLDTLLDGLKNTVILSITSLILAVLCGVIIGTMRTLPKTSIINYIFRTIGAIWVEIMRN 87

Query: 139 IPPLVVIFFLYKSVLSVLP 157
           IP LV +F  Y  V  + P
Sbjct: 88  IPLLVQVFLWYFVVPKIYP 106


>gi|167043000|gb|ABZ07713.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_ANIW137P11]
          Length = 684

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 9/162 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHF-DKPVLG-QFNFIGGSTVSPEFMSLYIALS 274
           +  PL+    F+ FG+   + I   Y+ +F D    G  + F G S     F+S    L 
Sbjct: 500 RNTPLIVQFMFIHFGVGIGLKIQKAYEGNFGDMGTDGLDYFFFGQSA----FISAIFTLG 555

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             + A+  E +R  + A+P GQMEA  ++GLT+    RLV+LPQA+R  IPPL ++ +NL
Sbjct: 556 LNSGAYQCETIRGAIAAIPTGQMEAGRSIGLTYMGTMRLVILPQAIRICIPPLGNEMVNL 615

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           + NSSLA+ +G+++L   G  II  T    +I   W  + +S
Sbjct: 616 VLNSSLAMVIGYSELARQGRLIIAVT---FQIFWAWGMVMIS 654


>gi|302337059|ref|YP_003802265.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634244|gb|ADK79671.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 225

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 82/135 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F S  IAL  +  A+IAEI R  + ++  GQMEAA +LG+  RKA R ++LPQA +  
Sbjct: 89  PPFPSAIIALGVHNGAYIAEIFRGSIQSIHYGQMEAARSLGMPRRKAMRRIILPQAFKRA 148

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +Q++  LK+SSLA  +   +L+  G  + + T   +E+++I    YL ++ ++ +
Sbjct: 149 VPSLGNQFIIALKDSSLASTIAVPELLLKGRQLGSSTFMYMEMLIIVAIWYLIMTSVLTI 208

Query: 384 FMNRLNAKIALKEKK 398
            ++RL  ++ + ++ 
Sbjct: 209 GVHRLEKRLRVSDRD 223


>gi|296156267|ref|ZP_06839106.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893773|gb|EFG73552.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 246

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 58/85 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  + ++ L+CY+ AFIAE  R+G+  V   Q +A  ALG+T   A R V+LPQA+R   
Sbjct: 110 ELFAGWLGLTCYSTAFIAEEFRAGIRGVGIAQYQAGAALGMTRYTALRHVILPQAVRIAT 169

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PPL  QY+N++KNSSL +A+G A+L
Sbjct: 170 PPLAGQYMNIVKNSSLTMAIGVAEL 194



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D  Y   +  GF+ T  L+    + AT++G  +   +++  + VA   R+YV VFRN P 
Sbjct: 9   DPRYLGWLAHGFLITLILSACVSVCATLLGFGLAMAQIAQQRSVAAAARLYVLVFRNSPL 68

Query: 142 LVVIFFLYKSVLSVLPIP 159
           LV + F Y    ++LP P
Sbjct: 69  LVQLLFWYFGAATLLPQP 86


>gi|220924347|ref|YP_002499649.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948954|gb|ACL59346.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 240

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +TA+ +AE VR+G+ ++PRGQ  A  ALGLT  +  R VLLP A R I+P
Sbjct: 108 FYTAVVCLGFFTASRVAEQVRAGIQSLPRGQRMAGTALGLTTGQTYRYVLLPNAYRIILP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN LKN+S+A+ +G  +L +   ++   + Q  E       +Y+ +++++    
Sbjct: 168 PLTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYIIINLVVVTAA 227

Query: 386 NRLNAKIALKEKK 398
             L  K+A+   +
Sbjct: 228 GFLERKVAIPGAR 240



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 12/104 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +YA  +L G V T   A    I A  +G+++G  R   N+        YVEVFRNIP L
Sbjct: 19  GTYADMLLSGLVWTIVTALCAWIIAFAVGSVIGVMRTLPNRAAQAFGNGYVEVFRNIPLL 78

Query: 143 VVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174
           V +F  +  +  +LP         +PD   ++ V+  G F  +R
Sbjct: 79  VQMFLWFFVLPELLPQDWGTWLKQLPDAPFYTAVVCLGFFTASR 122


>gi|73540165|ref|YP_294685.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72117578|gb|AAZ59841.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 227

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 77/127 (60%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  IA S + AA+ +EI+R+G+ +V RGQM AA ALG+T+ +  +LV+LPQA R+++P L
Sbjct: 101 SALIAFSLFEAAYYSEIIRAGIQSVSRGQMFAAQALGMTYGQTMKLVILPQAFRNMVPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      AD       +  + G+ +E++L    +Y  +   ++L + R
Sbjct: 161 LTQGIILFQDTSLVYVSALADFFGQAYGVGERDGRIVEMLLFAGLVYFVICYSVSLMVKR 220

Query: 388 LNAKIAL 394
              K+AL
Sbjct: 221 YQKKVAL 227


>gi|283852826|ref|ZP_06370089.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283571818|gb|EFC19815.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 253

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 24/144 (16%)

Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           LY+  F   G P LV I + Y      +H D P +     IG +T           L+C+
Sbjct: 87  LYVGAFR--GTPLLVQILIFYFCIGVLVHVDSPYV-----IGTAT-----------LACF 128

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+E+VR+G+ +V RGQ E A++ GLTHR+A   V+ PQA R I+PP+T Q+++ +K
Sbjct: 129 SGAYISEMVRAGVESVDRGQWETAVSSGLTHRQALFYVIFPQAARRIVPPVTGQFVSCIK 188

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +SSL   +   +L      ++N T
Sbjct: 189 DSSLLSVISVRELTK-AAEVVNAT 211


>gi|228989784|ref|ZP_04149764.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           pseudomycoides DSM 12442]
 gi|228769931|gb|EEM18514.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           pseudomycoides DSM 12442]
          Length = 214

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 3/94 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL++ +    ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYTQTLWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++LLK++SLAV +   +L+     IIN  GQ +
Sbjct: 153 FISLLKDTSLAVVISLPELMH-NAQIIN--GQNV 183



 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT D  +   +L G + T  +A   ++ + IIG++VG  R +   +V+ +    VE+ RN
Sbjct: 7   YTGD--HVLFLLKGLLVTLEIAVVAILLSFIIGSIVGTLRYAKIPVVSQLLAFIVEIIRN 64

Query: 139 IPPLVVIFFLY 149
           +P L++IFF Y
Sbjct: 65  LPLLLIIFFTY 75


>gi|116254867|ref|YP_770703.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259515|emb|CAK10653.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 252

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 93/167 (55%), Gaps = 11/167 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P+L       G+ V P F+++   L  Y +AF++E+VR+G++
Sbjct: 74  GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+A  ALG ++  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL 
Sbjct: 124 ALGPGQMDAGRALGHSYIGAMRFIILPQALYNMIPSIISTFVSTIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                + NQ   Q  ++ LI   +Y ++   +  F NRL   I  + 
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFANRLERSITRRR 230


>gi|261404397|ref|YP_003240638.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|329929716|ref|ZP_08283402.1| putative glutamine ABC transporter, permease protein GlnP
           [Paenibacillus sp. HGF5]
 gi|261280860|gb|ACX62831.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|328935933|gb|EGG32392.1| putative glutamine ABC transporter, permease protein GlnP
           [Paenibacillus sp. HGF5]
          Length = 216

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 81/129 (62%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + LS +  A IAEIVRSGL++V +GQ+EAA A GL++ +  R V+LP A+R +
Sbjct: 86  PTFWAAVVGLSIFEGAMIAEIVRSGLVSVDKGQIEAARASGLSYMQTLRHVILPLALRRM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIA 382
            PP+ SQ+++L+K++SLAV +   +L+     +   +    I  ++    +Y +L+ +++
Sbjct: 146 SPPMVSQFISLIKDTSLAVIISLPELMRNVQILSGSSYSYVIPALVFASLLYFTLNYLLS 205

Query: 383 LFMNRLNAK 391
           +   RL A+
Sbjct: 206 IIAKRLEAR 214


>gi|299821270|ref|ZP_07053158.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299816935|gb|EFI84171.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 240

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 26/213 (12%)

Query: 191 VFSFVLGIVLSLFATRLSR-HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +F F+LG++L+L  TR+ R     + GK    LYIS F   G P +V +   + + +  P
Sbjct: 35  IFGFILGLLLAL--TRIYRVPVLSQLGK----LYISFFR--GTPIMVQL---FIVFYGIP 83

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            +     I  S + P    LY A++ Y   +AA IAEIVR+G+ +V +GQ EAA ++GLT
Sbjct: 84  AITALVGIDTSKMDP----LYAAIATYALSSAAGIAEIVRAGVNSVEKGQEEAAYSIGLT 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I+ +  ++E+
Sbjct: 140 GRQTFLRIVLPQALLQAMPNFGNMIIGFLKDTSLAFSIGVMDMSGRGQTLISSSNHSLEV 199

Query: 367 ILIWMFIYLSLSIM-------IALFMNRLNAKI 392
            +    IY   +I+       +  FM R + ++
Sbjct: 200 YIALAVIYYLTAIVLEQGFKWVERFMKRDDTRV 232


>gi|75765094|ref|ZP_00744383.1| Glutamine transport system permease protein glnP [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218895696|ref|YP_002444107.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228899327|ref|ZP_04063590.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 4222]
 gi|74487418|gb|EAO51345.1| Glutamine transport system permease protein glnP [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218541097|gb|ACK93491.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228860358|gb|EEN04755.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 4222]
          Length = 214

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 37/172 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S VLGI++ +              + LPLL I  F  F LP      LK ++   
Sbjct: 47  KIPVVSQVLGIIVEVI-------------RNLPLLLIIFFTYFALPEA---GLKLEI--- 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                               ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+
Sbjct: 88  ------------------ITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A   ++LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     I  Q
Sbjct: 130 VQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQIISGQ 181



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P L++IFF 
Sbjct: 15  LLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|46204319|ref|ZP_00209357.1| COG0765: ABC-type amino acid transport system, permease component
           [Magnetospirillum magnetotacticum MS-1]
          Length = 240

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +TAA +AE VR+G+ ++PRGQ  A  ALGLT  +  R VLLP A R I+P
Sbjct: 108 FYTAVLCLGFFTAARVAEQVRAGIRSLPRGQALAGTALGLTVAQTYRFVLLPHAYRIILP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN LKN+S+A+ +G  +L +    +   + Q  E       +YL++++++    
Sbjct: 168 PLTSEFLNNLKNTSVALTIGLLELTARARAMQEFSFQVFEAFTAATLLYLAVNLVVVAGA 227

Query: 386 NRLNAKIALKEKK 398
             L  ++A+   +
Sbjct: 228 TLLERRLAVPGGR 240



 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 12/106 (11%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +YA  +L G   T   A      A  +G+++G  R   ++    +   YVE+FRN+P
Sbjct: 17  GTGTYADMLLSGLAWTVLTALGSWAIAFGLGSVIGVMRTLPSRAANAVGAAYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174
            LV +F  Y  +  +LP         +PD   ++ VL  G F   R
Sbjct: 77  LLVQMFLWYFVLPELLPARIGAAVKQMPDAPFYTAVLCLGFFTAAR 122


>gi|297517323|ref|ZP_06935709.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli OP50]
          Length = 195

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 60/84 (71%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 111 FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
           P+TS+ +NL+KNS++A  +G  D+
Sbjct: 171 PMTSEMMNLVKNSAIASTIGLVDM 194



 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +++Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P
Sbjct: 17  GNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V  F  Y  +  +LP
Sbjct: 77  LIVQFFTWYLVIPELLP 93


>gi|310766981|gb|ADP11931.1| Glutamate/aspartate transport system permease [Erwinia sp. Ejp617]
          Length = 225

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R++I
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALALGMTQWQSMQLIVLPQAFRAMI 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI    G  IE++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  K
Sbjct: 216 VSYLKKK 222



 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149
           G V T  + F+ ++   I GTL+   RLS+ K V+W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPVSWFAKIYVNLFRSVPLVMVLLWFYLV 78

Query: 150 -----KSVLSVLPIPD 160
                + VL + P  D
Sbjct: 79  VPGFLQQVLGLSPKTD 94


>gi|75759592|ref|ZP_00739679.1| Cystine transport system permease protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74492927|gb|EAO56056.1| Cystine transport system permease protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 251

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 29  SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 85  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 192

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 235



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 28  SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 87  VQIAILYFGITSVV 100


>gi|94309346|ref|YP_582556.1| amino acid ABC transporter permease [Cupriavidus metallidurans
           CH34]
 gi|93353198|gb|ABF07287.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 227

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 111/214 (51%), Gaps = 10/214 (4%)

Query: 183 MDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           M  +AKI V + ++GIV    L   RLS      + K L         +F    LV++ L
Sbjct: 22  MLVSAKITVTAVIVGIVWGTILAMMRLS------SNKLLNWFAQGYVTLFRSIPLVMVLL 75

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + L   + +   FN    S +     S  IA S + AA+ +EI+R+G+ +V RGQM AA
Sbjct: 76  WFFLIIPQLLQKTFNLSAASDL--RMTSALIAFSLFEAAYYSEIIRAGIQSVSRGQMFAA 133

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+G+T+ ++ RLV+LPQA R+++P L +Q + L +++SL      AD       I  + 
Sbjct: 134 QAMGMTYGQSMRLVILPQAFRNMVPLLLTQGIILFQDTSLVYVSALADFFGQAYGIGERD 193

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G+ +E++L    IY  +    +L + R   K+A+
Sbjct: 194 GRIVEMLLFAGLIYFIICFSASLLVKRYQKKVAV 227



 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 32/48 (66%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + +I   + GT++   RLS+NKL+ W  + YV +FR+IP ++V+ + +
Sbjct: 31  TAVIVGIVWGTILAMMRLSSNKLLNWFAQGYVTLFRSIPLVMVLLWFF 78


>gi|311069228|ref|YP_003974151.1| glutamine ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310869745|gb|ADP33220.1| glutamine ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 218

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 27/181 (14%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T + LPLL I  F  F LP    I +K +             I  + ++        AL
Sbjct: 60  ETIRNLPLLLIIFFTYFALPE---IGIKLE-------------ITAAAIT--------AL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + +A ++EI+RSGL +V +GQ EAA + GL++ +   L+++PQA+R ++PP+ SQ+++
Sbjct: 96  TIFESAMLSEIIRSGLKSVEKGQTEAARSSGLSYVQTLFLIIMPQALRRMVPPIVSQFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390
           LLK++SLAV +   +L+     I  Q+  +     I L+  F+Y +++  ++L   +L  
Sbjct: 156 LLKDTSLAVVIALPELIHNAQIINGQSADSSYFFPIFLLAAFMYFAVNYSLSLAARKLEL 215

Query: 391 K 391
           K
Sbjct: 216 K 216



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  Y+SD  + T +L GF+ T ++AF  ++ + + G ++G  R +   +V+ I  V VE 
Sbjct: 4   IEAYSSD--HLTFLLDGFLVTLYVAFISIVLSFMFGGVIGTLRYANIPIVSNILAVAVET 61

Query: 136 FRNIPPLVVIFFLY 149
            RN+P L++IFF Y
Sbjct: 62  IRNLPLLLIIFFTY 75


>gi|81428667|ref|YP_395667.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78610309|emb|CAI55358.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Lactobacillus sakei subsp. sakei 23K]
          Length = 487

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 79/129 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IA+S  +AA++AEI+RSG+ A+  GQ EA+ +LGL+     R ++LPQA+++I
Sbjct: 356 PALFAGVIAVSLNSAAYVAEIIRSGINAIDAGQTEASRSLGLSQHDTMRYIILPQALKNI 415

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L +++++L+K SS+   +G  DL+     + + T + +  I + M IY  L+  ++ 
Sbjct: 416 WPALGNEFISLIKESSIVSIIGVTDLIYQLKVVQSATYKGVAPIFVAMVIYFILTFSLSK 475

Query: 384 FMNRLNAKI 392
            +N +  K+
Sbjct: 476 LLNHIERKM 484


>gi|228937645|ref|ZP_04100282.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228977104|ref|ZP_04137505.1| Amino acid ABC transproter, permease [Bacillus thuringiensis Bt407]
 gi|228782552|gb|EEM30729.1| Amino acid ABC transproter, permease [Bacillus thuringiensis Bt407]
 gi|228822019|gb|EEM68010.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 251

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 29  SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 85  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 192

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 235



 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 28  SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 87  VQIAILYFGITSVV 100


>gi|163941155|ref|YP_001646039.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|229012723|ref|ZP_04169893.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
 gi|229061107|ref|ZP_04198458.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
 gi|163863352|gb|ABY44411.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|228718190|gb|EEL69828.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
 gi|228748558|gb|EEL98413.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
          Length = 222

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 115/228 (50%), Gaps = 33/228 (14%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           SFP L      T+       + SF +GI L++     ++  +      +  +YIS F   
Sbjct: 11  SFPQLFKYVYITLGITVVSMIISFFIGIGLAIITKNKTKFLYP-----IARVYISFFR-- 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEI 284
           G P LV +   + L+F  P            +SP F  L       I LS   AA+++EI
Sbjct: 64  GTPLLVQL---FVLYFGLP-----------QISPAFTVLTAMQATLIGLSLNNAAYLSEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+ A+
Sbjct: 110 IRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G A++++    +  Q+ + +E  L    +Y  ++I+I+    RL  K+
Sbjct: 170 GVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKRLEKKL 217


>gi|150389058|ref|YP_001319107.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
 gi|149948920|gb|ABR47448.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
          Length = 227

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 26/207 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           VF F++G+ ++       R  +  T       + +PLL       FG+P +        +
Sbjct: 34  VFGFMIGLTVAFIRIYKVRGLYPLTSIYLSAIRGVPLLIQIFIFYFGVPQI----FPQTI 89

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           HF  P                FMS  IA S  + A+++E +R+ ++++ +GQ EAA+++G
Sbjct: 90  HFLTP----------------FMSACIAFSINSGAYMSETIRAAILSIDKGQKEAALSVG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  KA + ++LPQA    IP L +  +NLLK +SLA  +G ADL+     +     + +
Sbjct: 134 MTEFKAMKNIVLPQAAVVAIPSLGNTIINLLKETSLAFTIGIADLLGRAKMLSASNYRYL 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E  +    IY  ++I+I   +N+L  +
Sbjct: 194 ETFVATGLIYWGITILITYVLNKLEKR 220


>gi|322833421|ref|YP_004213448.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168622|gb|ADW74321.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 249

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 17/212 (8%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTF---------LIFGLPTLVLIALKYQLHFD 247
           GI+ +L  + L+  F    G  L L  +S F          ++GL  + L+ + +  +F 
Sbjct: 27  GILCTLLISLLAVLFALPVGILLGLARLSPFRWLSWPAACWVYGLRGIPLLMVVFWTYFC 86

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+L   N  G       F ++   L  Y +A+IAEIVR G+ A+P GQ EAA ALG+++
Sbjct: 87  VPLLIGHNISG-------FSTMLCTLVIYESAYIAEIVRGGIQALPGGQYEAARALGMSY 139

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEI 366
            K  RL++LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   +  ++
Sbjct: 140 FKTLRLIILPQALYNTLPSLVSQLVSIIKDSTLGYVINVPELTFAANQVNNQLLTKPFQV 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I    Y  +   +    N+L A+I  K + 
Sbjct: 200 FAIVAIGYYIICFSLTWLANKLEARITRKRQN 231


>gi|228970534|ref|ZP_04131184.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228789121|gb|EEM37050.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
          Length = 230

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 37.0 bits (84), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 7   SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 66  VQIAILYFGITSVV 79


>gi|317405101|gb|EFV85447.1| amino acids ABC transporter [Achromobacter xylosoxidans C54]
          Length = 229

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 93/178 (52%), Gaps = 14/178 (7%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVSPEFMSLY------------IALSCYTA 278
           P   L+    + H + P+L Q  F + G   + PE   ++            IAL+  +A
Sbjct: 47  PCRWLVDAYVEYHRNVPLLVQVLFWYFGMPELLPEGFRMWLYQHNAEMSLAAIALALGSA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAE +RSGL A+P  Q EAA ALG ++ +  R V++PQA+R  IPPL  + L L KN+
Sbjct: 107 AYIAEDIRSGLRAIPGTQFEAARALGASYLQCMRFVIVPQAVRISIPPLVGRALLLFKNT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           S+A+A+G  +L      I N+T +          +YL  S +I L  +R+ A+  L  
Sbjct: 167 SVAMAIGVMELTYQAREIENETYRTFATFGAATLMYLLGSFLIMLIGSRIYARYRLNR 224


>gi|319791543|ref|YP_004153183.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315594006|gb|ADU35072.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 229

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 82/136 (60%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS    E +S  I    + AA+ +EI+R+G+ ++PRGQ+ A  A+G+T+ +  RLV+LPQ
Sbjct: 93  GSNYRSE-ISAVITFVAFEAAYFSEIMRAGIQSIPRGQVNAGQAVGMTYGQNMRLVVLPQ 151

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  D++    T     G+ IE  L+   +Y  + 
Sbjct: 152 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNFGRPIEAYLLAAVVYFVMC 211

Query: 379 IMIALFMNRLNAKIAL 394
             ++  + RL+ KIA+
Sbjct: 212 YALSWLVKRLHKKIAI 227


>gi|270293060|ref|ZP_06199271.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279039|gb|EFA24885.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 227

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 17/211 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFD 247
           F  +LG++L+ FA R          +  PL++ +   ++   G P +V I + + L H D
Sbjct: 30  FGTILGVLLA-FAQR---------SRFKPLVWFANVYVWIFRGTPMMVQIMIAFALMHID 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P + Q   +G        +   + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  
Sbjct: 80  APTI-QVGILGVDL--SRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRP 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           + A R V+LPQA+++I+P L ++++ ++K+SSL   +G  +L +   T+   T   +  +
Sbjct: 137 KNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSTIGVMELWNGATTVATTTYLPLTPL 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L   F YL ++ ++ + +      I   +KK
Sbjct: 197 LFAAFYYLIMTSVLTVALKAFENYIGQGDKK 227


>gi|168184995|ref|ZP_02619659.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|182671932|gb|EDT83893.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
          Length = 228

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 103/182 (56%), Gaps = 14/182 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L     + +GLPT   I +++    + P+LG  NF       P+F +  +ALS  
Sbjct: 61  RGTPVLVQLYIIYYGLPT---IGIRFP---EVPILGS-NF-------PDFFAGILALSIN 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AEI+R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++ ++K
Sbjct: 107 SGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            SS+   +G  +L+    T+     +  E +L+   +Y  ++  ++  +     ++ + +
Sbjct: 167 ESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAAVMYFIMTFTLSKLLGVAERRMRVSD 226

Query: 397 KK 398
           + 
Sbjct: 227 RN 228


>gi|148992490|ref|ZP_01822185.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|168484481|ref|ZP_02709433.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1873-00]
 gi|168485772|ref|ZP_02710280.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1087-00]
 gi|168489799|ref|ZP_02713998.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP195]
 gi|225856490|ref|YP_002738001.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae P1031]
 gi|147928807|gb|EDK79820.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|172042312|gb|EDT50358.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1873-00]
 gi|183571006|gb|EDT91534.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1087-00]
 gi|183571820|gb|EDT92348.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP195]
 gi|225725161|gb|ACO21013.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae P1031]
          Length = 227

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+ F  R          K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 83  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 138 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227


>gi|320154861|ref|YP_004187240.1| putative amino acid ABC transporter permease [Vibrio vulnificus
           MO6-24/O]
 gi|319930173|gb|ADV85037.1| putative amino acid ABC transporter permease protein [Vibrio
           vulnificus MO6-24/O]
          Length = 238

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 31/183 (16%)

Query: 191 VFSFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +F+  LG++++L A        RL+R + E   +A+P+L +  ++ +GLPTL+ ++L + 
Sbjct: 49  LFAMTLGLMVALPALSPRKSLQRLNRIYVEVI-RAIPVLVLLLWVYYGLPTLLDVSLDH- 106

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 + +  IAL+   +AF+AE+ R G+ ++ RGQ EAA +L
Sbjct: 107 ----------------------YWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSL 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +  RLV+LPQA R ++P L +Q++ +LK SSL   +G +DL      ++      
Sbjct: 145 GLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLP 204

Query: 364 IEI 366
           +EI
Sbjct: 205 LEI 207



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  +G +V    LS  K +  + R+YVEV R IP LV++ ++
Sbjct: 33  LIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWV 92

Query: 149 YKSVLSVLPIP-DH 161
           Y  + ++L +  DH
Sbjct: 93  YYGLPTLLDVSLDH 106


>gi|320160626|ref|YP_004173850.1| amino acid ABC transporter permease protein [Anaerolinea
           thermophila UNI-1]
 gi|319994479|dbj|BAJ63250.1| amino acid ABC transporter permease protein [Anaerolinea
           thermophila UNI-1]
          Length = 291

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 124/234 (52%), Gaps = 23/234 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-- 238
           +T+ T    FV S V+G++  L   R++R+   +    L  LY+   ++ G+P LVLI  
Sbjct: 65  VTITTTLTAFVISLVIGLMAGL--GRIARNVFFRN---LSTLYVE--IVRGIPMLVLIFF 117

Query: 239 -------ALKYQLHFDKPVLGQ--FNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEI 284
                  A+   L+    VL +    + GG T       P  +   IALS    AF AE+
Sbjct: 118 IAFVAVPAVTSALNALGRVLVEAGLTWAGGLTQLENSGVPMQIRAIIALSVTYGAFSAEV 177

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++P+GQMEAA + G+T+ +A R V+LPQA+R+++P L + ++++LK+SSL   +
Sbjct: 178 FRAGIQSIPKGQMEAARSQGMTYWQAMRYVILPQAIRNVLPALGNDFVSMLKDSSLVSVL 237

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              D+  V      QT +  E       +YL ++++++L +  +   ++  + +
Sbjct: 238 AVRDITQVARLYAGQTFRYPEAFTTLAVLYLIMTLVLSLGVKAIERGLSHGQHR 291



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 81  SDSSYATA---ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           S  SY  A   I  G   T     +  + + +IG + G GR++ N     +  +YVE+ R
Sbjct: 48  SQPSYNQAFVFIQAGIHVTITTTLTAFVISLVIGLMAGLGRIARNVFFRNLSTLYVEIVR 107

Query: 138 NIPPLVVIFFL 148
            IP LV+IFF+
Sbjct: 108 GIPMLVLIFFI 118


>gi|270284367|ref|ZP_05965993.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Bifidobacterium gallicum DSM 20093]
 gi|270276731|gb|EFA22585.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Bifidobacterium gallicum DSM 20093]
          Length = 322

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 1/138 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  +   TV   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+   +  R
Sbjct: 140 EFWSVDSKTVITAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAQALGMKRAQIMR 199

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR IIPP  ++ + +LK +SL +AV F  +L      I N+  + I ++L+  
Sbjct: 200 RVVLPQAMRIIIPPTGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAA 259

Query: 372 FIYLSLSIMIALFMNRLN 389
             YL ++ ++ +  +RL 
Sbjct: 260 IWYLFITSIMMVLQSRLE 277


>gi|111657768|ref|ZP_01408489.1| hypothetical protein SpneT_02001056 [Streptococcus pneumoniae
           TIGR4]
 gi|148990332|ref|ZP_01821518.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|148997101|ref|ZP_01824755.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149010549|ref|ZP_01831920.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|168490915|ref|ZP_02715058.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC0288-04]
 gi|168492978|ref|ZP_02717121.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC3059-06]
 gi|168575482|ref|ZP_02721418.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|169833263|ref|YP_001694278.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|194396808|ref|YP_002037460.1| amino acid ABC transporter permease [Streptococcus pneumoniae G54]
 gi|225858625|ref|YP_002740135.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 70585]
 gi|237650814|ref|ZP_04525066.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CCRI 1974]
 gi|237821580|ref|ZP_04597425.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|303260286|ref|ZP_07346257.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303261492|ref|ZP_07347440.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264160|ref|ZP_07350081.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303267026|ref|ZP_07352898.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303269212|ref|ZP_07354989.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|307067421|ref|YP_003876387.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|147756801|gb|EDK63841.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147765030|gb|EDK71959.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147924361|gb|EDK75452.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|168995765|gb|ACA36377.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|183574731|gb|EDT95259.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC0288-04]
 gi|183577004|gb|EDT97532.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC3059-06]
 gi|183578509|gb|EDT99037.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|194356475|gb|ACF54923.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae G54]
 gi|225721724|gb|ACO17578.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 70585]
 gi|301801656|emb|CBW34356.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae INV200]
 gi|302637626|gb|EFL68113.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638610|gb|EFL69074.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302641276|gb|EFL71646.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302643420|gb|EFL73695.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646565|gb|EFL76791.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|306408958|gb|ADM84385.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|327390176|gb|EGE88519.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
 gi|332077236|gb|EGI87698.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 227

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+ F  R          K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 83  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 138 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227


>gi|324997391|ref|ZP_08118503.1| amino acid ABC transporter membrane protein [Pseudonocardia sp. P1]
          Length = 215

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 85/131 (64%), Gaps = 6/131 (4%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    I L+ YTAAF+ E+VRSG+  VP GQ EAA ALG T  +    V+LPQA+R++
Sbjct: 83  PFFALACIGLTLYTAAFVCEVVRSGINTVPVGQAEAARALGFTFTQTLGQVVLPQAVRAV 142

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGG--TIINQTGQAIEIILIWMFIYLSLSIM- 380
           +PP+T+  + LLKN++  +A GFA + ++G   +++++ G  + + L+W+ ++  + +  
Sbjct: 143 VPPMTNVQIALLKNTT--IASGFA-VFNMGNVYSVLSERGYNVLVGLLWVALFFIILVAP 199

Query: 381 IALFMNRLNAK 391
           + L   RL+A+
Sbjct: 200 LTLLQRRLDAR 210


>gi|171059368|ref|YP_001791717.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|171060693|ref|YP_001793042.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170776813|gb|ACB34952.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
 gi|170778138|gb|ACB36277.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 247

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 13/195 (6%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           VL ++++L    L   F     +AL  L  S T L   +P LV I L Y  H    +   
Sbjct: 47  VLALIVALAVGSLMGIFRTTPSRALVALGNSWTELFRNIPLLVQIFLWY--HVLPQIFPS 104

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
              I      P F+ + + L  +T+A ++E V++G+  +P+GQ  A +A+GLT  +  R 
Sbjct: 105 LQAI------PSFILVVVGLGFFTSARVSEQVKAGIQTLPKGQRYAGLAMGLTLPQTYRY 158

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           VLLP A R +IPPLTS+ +N++KNSS+A AV   +L         +T + +EI L    +
Sbjct: 159 VLLPMAFRIVIPPLTSESMNIIKNSSVAFAVSVTELTMFAMQAQEETSRGVEIYLAVTAL 218

Query: 374 YLSLSIMIALFMNRL 388
           Y     + A F+NR+
Sbjct: 219 YF----ISAFFINRV 229



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+  G +    D +Y   +L  +  T  +A   +I A  +G+L+G  R + ++ +  +  
Sbjct: 17  EVVAGCLGSGGDITYLDWLLSAWGWTLSVAVLALIVALAVGSLMGIFRTTPSRALVALGN 76

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLP----IPDHS-IVLPFGMFLNNR 174
            + E+FRNIP LV IF  Y  +  + P    IP    +V+  G F + R
Sbjct: 77  SWTELFRNIPLLVQIFLWYHVLPQIFPSLQAIPSFILVVVGLGFFTSAR 125


>gi|330973076|gb|EGH73142.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 146

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 78/137 (56%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G  T    F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG+ + +  RL++LP
Sbjct: 10  GEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILP 69

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R + P L  Q + L +++SL   VG  D ++   +  +  G+A E ++I   +Y ++
Sbjct: 70  QAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVYFTI 129

Query: 378 SIMIALFMNRLNAKIAL 394
           S   +L + RL  + A+
Sbjct: 130 SFAASLLVKRLQKRFAV 146


>gi|322833090|ref|YP_004213117.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168291|gb|ADW73990.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 257

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/104 (42%), Positives = 66/104 (63%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++PEF+     L+ +TAAF+ E V++GL +VP+GQ EAAI+ G + +     +LLPQA+ 
Sbjct: 110 LTPEFLCAAWGLALFTAAFLVEEVQAGLNSVPKGQTEAAISQGFSRKTLLLSILLPQALT 169

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +   P+T QYLNL+K SSLA  +GF++L      I +    A E
Sbjct: 170 NAWQPVTGQYLNLMKLSSLATGIGFSELTYQVSQIESYNAHAFE 213



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 40/69 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ GF+ T +++ +G + AT++  L+ A RLS +++       +V VFRN P LV + F 
Sbjct: 19  IISGFLTTLYVSLAGSLIATLLTVLLIALRLSTSRIARGAVAAFVSVFRNTPLLVQLLFW 78

Query: 149 YKSVLSVLP 157
           Y +    LP
Sbjct: 79  YFAAYGALP 87


>gi|315444883|ref|YP_004077762.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|315263186|gb|ADT99927.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 291

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 31/224 (13%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V + +LG VL +   RLS H         P+ ++S+ L+     +P L+++
Sbjct: 71  TLTAAAVSIVLALILGFVLGV--GRLSTH--------TPIRWVSSVLVEFFRAVPVLIMM 120

Query: 239 ALKYQLH-----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
              Y L+     F    L     I G             L+ Y  A IAEIVR+G+ A+P
Sbjct: 121 IFAYFLYAFYDVFPSKYLALAGVITG-------------LTLYNGAVIAEIVRAGVHALP 167

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA+ ALGLT  +  R +LLPQA+ S++P L SQ + +LK+++L   + F ++V  G
Sbjct: 168 RGQAEASSALGLTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDTALGYQITFVEMVRQG 227

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I +  G  I  +++   + ++L+  ++ F   L  ++    K
Sbjct: 228 TVIGSAYGNYIPALIVIAALMIALNFSLSWFATWLEKRMRRSRK 271



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L ER     ++   P+ +   + T +L G   T   A   ++ A I+G ++G GRLS + 
Sbjct: 40  LDERGQLTAEK-WEPFLTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGVGRLSTHT 98

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149
            + W+  V VE FR +P L+++ F Y
Sbjct: 99  PIRWVSSVLVEFFRAVPVLIMMIFAY 124


>gi|296129395|ref|YP_003636645.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
 gi|296021210|gb|ADG74446.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
          Length = 292

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 63/86 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++   L+ Y  A IAEIVR+GL ++P+GQ EAA A+GL+  +  RLVLLPQA+R++ P
Sbjct: 141 FAAVVFGLTVYNMAIIAEIVRAGLASLPKGQSEAAYAVGLSRGQTLRLVLLPQALRTMAP 200

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            L +Q + LLK+SSL   VG+A+L++
Sbjct: 201 SLVAQLVVLLKDSSLGFIVGYAELLN 226


>gi|149010774|ref|ZP_01832145.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147765255|gb|EDK72184.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
          Length = 225

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 76/131 (58%), Gaps = 3/131 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R I
Sbjct: 91  PIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISALRLIILPQAFRII 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + PLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +A 
Sbjct: 151 LLPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPGFLGAALLYFALCFPVAQ 210

Query: 384 F---MNRLNAK 391
           F   M + N K
Sbjct: 211 FGRKMEQANKK 221



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    ++  
Sbjct: 20  GFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIVFYG 79

Query: 152 VLSVLP-IPDHSIVLP 166
               LP I DH I++P
Sbjct: 80  ----LPLISDHIIMIP 91


>gi|312198105|ref|YP_004018166.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311229441|gb|ADP82296.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 336

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 25/147 (17%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+P+L +  F+  GLPT+ L         D PV               F  L + L+ Y 
Sbjct: 110 AIPVLLLIYFIGLGLPTIGL---------DLPV---------------FWFLVLGLTLYN 145

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +AF AEI R+G++A+P GQ EAA ALGL    A R V+LPQA+R ++P L SQY+ LLK+
Sbjct: 146 SAFFAEIFRTGIVALPSGQREAAAALGLGFWPAMRFVVLPQAIRRMVPSLLSQYIVLLKD 205

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAI 364
           +SL   + + +L+   G I  Q  Q++
Sbjct: 206 TSLGFVLPYPELLRR-GQITGQYAQSV 231


>gi|295096062|emb|CBK85152.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 248

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 72/133 (54%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +PEF+     L  +T+AF+ E V SGL +VP GQ EAA+A G +  +  R +LLPQ + +
Sbjct: 110 TPEFLCSAWGLGVFTSAFLIEEVESGLRSVPAGQREAALAQGFSSWRLFRYILLPQGLAN 169

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
              P+  QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL   ++  
Sbjct: 170 AWQPVVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFTVGTVLYLLTGMVTG 229

Query: 383 LFMNRLNAKIALK 395
             + RL      K
Sbjct: 230 SVLVRLGPHSGRK 242



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL GF+ T W+  +G++ A+++       RLS  +    I   +V +FRN P LV + F 
Sbjct: 18  ILSGFLTTLWVTLAGIMLASLLALFFMLLRLSGGRFGTLIVSGWVSLFRNTPLLVQLLFW 77

Query: 149 YKSVLSVLP 157
           Y +  + LP
Sbjct: 78  YFAAWNGLP 86


>gi|258404611|ref|YP_003197353.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257796838|gb|ACV67775.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 293

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 73/123 (59%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  + L+ Y  A+I EIVRSG+ ++ RGQ EAA ALGL+  +  R V+LPQA+R +IPP
Sbjct: 164 ISAVVTLALYEGAYITEIVRSGIQSIERGQWEAAYALGLSKFEQLRYVILPQAVRRVIPP 223

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LT Q+++ +K+S++   +   +L   G  ++  T    E+ +    +Y  L+   +L   
Sbjct: 224 LTGQFISTIKDSAIVSVISVPELTFQGMELMAATYLTFEVWITVTVLYFLLTFSCSLLAR 283

Query: 387 RLN 389
           R+ 
Sbjct: 284 RIE 286


>gi|225025180|ref|ZP_03714372.1| hypothetical protein EIKCOROL_02074 [Eikenella corrodens ATCC
           23834]
 gi|224942039|gb|EEG23248.1| hypothetical protein EIKCOROL_02074 [Eikenella corrodens ATCC
           23834]
          Length = 259

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS  + A+I E+ RSG+ ++ RGQMEAA +LGL++ +A R ++LPQ +R ++ PL ++
Sbjct: 132 LALSFNSGAYITEVFRSGIKSIDRGQMEAARSLGLSYGQAMRYIILPQTLRRMLGPLGNE 191

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +  A+L  V  +   +     E       +YL L++ +A F  RL  
Sbjct: 192 FITLLKDSSLLATIAVAELTYVAKSAAGRYYVYEEPYYFIALVYLMLTMALAWFFARLEK 251

Query: 391 K 391
           K
Sbjct: 252 K 252


>gi|254471270|ref|ZP_05084672.1| amino acid ABC transporter, permease protein [Pseudovibrio sp.
           JE062]
 gi|211959416|gb|EEA94614.1| amino acid ABC transporter, permease protein [Pseudovibrio sp.
           JE062]
          Length = 319

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 77/128 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI R+G+ AVPR Q EAA ALGL   +    V+LPQA+R IIPP  + 
Sbjct: 190 LALSLSYGAYMTEIFRAGIQAVPREQSEAAAALGLQPWQTMWKVVLPQAIRIIIPPTGNN 249

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++++LK+SSL  A+G  +L+ +  T+     +  E+++    IY ++S +  +   RL  
Sbjct: 250 FISMLKDSSLVSAMGIMELMYLARTLGRSEFKHFEMLISAALIYWAVSFVFEMIQARLEK 309

Query: 391 KIALKEKK 398
           + A  +K+
Sbjct: 310 RFATSQKR 317


>gi|15900711|ref|NP_345315.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|182683734|ref|YP_001835481.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|14972296|gb|AAK74955.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|182629068|gb|ACB90016.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
          Length = 229

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+ F  R          K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 35  ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 84

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 85  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 139

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 140 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 199

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 200 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 229


>gi|49474412|ref|YP_032454.1| amino acid permease [Bartonella quintana str. Toulouse]
 gi|49239916|emb|CAF26314.1| Amino acid permease [Bartonella quintana str. Toulouse]
          Length = 250

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 72/115 (62%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +T+A IAE VRSG+ A+P GQ  AA+A+G T  +  R ++LP+A+R I+PPLTS+ 
Sbjct: 120 ALGFFTSARIAEQVRSGIEAIPSGQRYAAMAMGFTTYQTYRYIILPRALRMIMPPLTSEA 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + ++KNSS+A AV   +L+      I +     E  LI   +Y+ +++ I + M 
Sbjct: 180 MGIVKNSSIAFAVSIYELMQFQYQTIEEVSHVYENYLIVTILYIFIALCIFIIMT 234



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFRN 138
           +Y   +L GF NT  L+ S +I A   G ++G  R   N      L+  I  ++VE+ RN
Sbjct: 28  TYLDTLLDGFKNTVILSVSSLILAVFFGIIIGTMRTLPNTSIIRCLLRAIGGIWVEIMRN 87

Query: 139 IPPLVVIFFLYKSVLSVLPI 158
           IP LV +F  Y  V  V P+
Sbjct: 88  IPLLVQVFLWYFVVPKVYPL 107


>gi|327438810|dbj|BAK15175.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 233

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 4/143 (2%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T    ++S  + L   +AA+ AEI R+G+ ++ +GQMEAA +LGLT  +A R V+LPQA
Sbjct: 88  GTSQGWWVSGIVGLILNSAAYNAEIFRAGIQSIDKGQMEAARSLGLTQSQAMRKVILPQA 147

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R +IPPL ++++ LLK+SSL   +  A+++ V   +     +  E  L   F+YL L+ 
Sbjct: 148 FRRMIPPLGNEFIALLKDSSLVTVIAGAEILYVSKVVAGTYQRFWEPYLFAAFLYLVLTY 207

Query: 380 ----MIALFMNRLNAKIALKEKK 398
               +IA    R++     ++KK
Sbjct: 208 AVTKLIAFIERRVDINYNPRKKK 230



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L   G I   I G ++G G++S  K + W  ++YV+VFR  P LV +  ++  
Sbjct: 22  GLWATIVLTACGYIGGIIFGLVLGLGQVSTKKWIYWPAKIYVDVFRGTPMLVQLLLIH-- 79

Query: 152 VLSVLP 157
            L+V+P
Sbjct: 80  -LAVIP 84


>gi|217967440|ref|YP_002352946.1| polar amino acid ABC transporter, inner membrane subunit
           [Dictyoglomus turgidum DSM 6724]
 gi|217336539|gb|ACK42332.1| polar amino acid ABC transporter, inner membrane subunit
           [Dictyoglomus turgidum DSM 6724]
          Length = 218

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 70/109 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS  +AA+  EI RSG+ ++ +GQMEAA +LG+T+ +A R ++LPQA R I+PPLT++
Sbjct: 93  VGLSLNSAAYTGEIFRSGIQSIDKGQMEAARSLGMTYFQAMRYIILPQAFRRILPPLTNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           ++++LK SSLA  +   +L+  G  I+          L    IYL +++
Sbjct: 153 FVSMLKESSLASTLAVTELLRAGREIVAWKANVFSPFLGVTLIYLLMTL 201


>gi|160879005|ref|YP_001557973.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium phytofermentans ISDg]
 gi|160427671|gb|ABX41234.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium phytofermentans ISDg]
          Length = 235

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 108/204 (52%), Gaps = 16/204 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDK 248
           F+ ++G +L  F   + R  + KTGK   L ++      +I G P +V + + Y      
Sbjct: 40  FAVMIGALLG-FIIAIIRSTYSKTGKLRVLNFLCNIYITVIRGTPVVVQLLIIY------ 92

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F   G   ++  F+++ +A    + A+++EIVRSG+++V  GQ EA  +LG  + 
Sbjct: 93  -----FVIFGSVNINKIFVAV-LAFGLNSGAYVSEIVRSGIMSVDEGQFEAGRSLGFNYN 146

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RL++LPQA+++I+P L ++++ LLK +S+   +   DL   G  I  +T  A   ++
Sbjct: 147 QTMRLIILPQAIKNILPALGNEFIVLLKETSVCGFIALEDLTKAGDIIRGRTYDAFMPLI 206

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
               IYL+L I+    +N L  ++
Sbjct: 207 AVALIYLTLVIIFTKLVNYLERRL 230


>gi|307329670|ref|ZP_07608828.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306884728|gb|EFN15756.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 214

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 11/130 (8%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL CYT+AFI E VR+G+  VP GQ EAA  LG+T  +    V+LPQA RS+IPP+ S 
Sbjct: 89  IALGCYTSAFICEAVRAGINTVPVGQGEAARGLGMTFDQTLSAVVLPQAFRSVIPPIGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            + L KNS++A +    +L+   GT   +N+ G ++    IW F++++   +I      +
Sbjct: 149 LIALAKNSAIAGSFSVTELL---GTYKPLNERGYSV----IWSFVWIAAGYLIITLA--I 199

Query: 389 NAKIALKEKK 398
           +A  AL E++
Sbjct: 200 SAIFALLERR 209


>gi|295836168|ref|ZP_06823101.1| glutamate permease [Streptomyces sp. SPB74]
 gi|295825886|gb|EDY42198.2| glutamate permease [Streptomyces sp. SPB74]
          Length = 227

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YT+ F+ E VRSG+  VP GQ EAA ALGL  R+   L++LPQA RS++ PL + 
Sbjct: 102 LGLILYTSTFVCEAVRSGINTVPMGQAEAARALGLNFRQVLTLIILPQAFRSVVNPLANV 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KN+++A A+G  +   +   +I    + + I L++ F ++ L++   L +  ++ 
Sbjct: 162 LIALTKNTTIAAAIGVGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVSK 221

Query: 391 KIALKE 396
           K+A+K 
Sbjct: 222 KVAIKR 227


>gi|332111084|gb|EGJ11116.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 250

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 82/132 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +ALS    A+I+EI R+G++++ RGQ +AA ++GLTH +A R V+LPQA R ++P
Sbjct: 119 FLSGCVALSLNAGAYISEIFRAGILSIHRGQTQAAYSVGLTHAQAMRYVVLPQAFRRMVP 178

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++ + L+K+SSL  A+G A+L     T+     +  E  L    +YL L++ ++L  
Sbjct: 179 ALVNEGVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAMYLVLTLTLSLLA 238

Query: 386 NRLNAKIALKEK 397
            RL A   L+ +
Sbjct: 239 KRLEAPAHLRGR 250


>gi|253584218|ref|ZP_04861416.1| amino acid transport system permease [Fusobacterium varium ATCC
           27725]
 gi|251834790|gb|EES63353.1| amino acid transport system permease [Fusobacterium varium ATCC
           27725]
          Length = 241

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 19/211 (9%)

Query: 195 VLGIVLSLFATRLS-RHFH--------EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           ++G++L +F   +   HF+        EK      L +    LI G P +V      QL 
Sbjct: 41  LIGVILGIFIALMELSHFYPLKHRKGWEKFNPLSSLAFAYVDLIRGTPAVV------QLM 94

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
               +L    F+G    +P  +   ++    + A++AEI+R+G+  + +GQMEAA ALG+
Sbjct: 95  ----ILANLIFVGALRDTPILVIAGLSFGINSGAYVAEIIRAGIEGLDKGQMEAARALGM 150

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +  A + +++PQA++ I+P L S+++ LLK +S+   +G  DL+     I +QT + +E
Sbjct: 151 PYGIAMKEIIIPQAVKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVE 210

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +L    IYL L+ +   FM  +   + + +
Sbjct: 211 PLLAVGLIYLVLTAVFTKFMRGIEKGLKVSD 241


>gi|30018609|ref|NP_830240.1| cystine transport system permease protein [Bacillus cereus ATCC
           14579]
 gi|296501181|ref|YP_003662881.1| cystine transport system permease [Bacillus thuringiensis BMB171]
 gi|29894150|gb|AAP07441.1| Cystine transport system permease protein [Bacillus cereus ATCC
           14579]
 gi|296322233|gb|ADH05161.1| cystine transport system permease protein [Bacillus thuringiensis
           BMB171]
          Length = 230

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLILVLLFTYFVNLLEKRLQRKE 214



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 7   SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 66  VQIAILYFGITSVV 79


>gi|323143936|ref|ZP_08078594.1| glutamine ABC transporter permease protein [Succinatimonas hippei
           YIT 12066]
 gi|322416300|gb|EFY06976.1| glutamine ABC transporter permease protein [Succinatimonas hippei
           YIT 12066]
          Length = 218

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 17/198 (8%)

Query: 196 LGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           LG ++ LF     LSR+++ +    + + +I      G P LV I   + ++F  P+   
Sbjct: 34  LGTLIGLFVGIAELSRYWYFRIPSKIYVDFIR-----GTPLLVQI---FIIYFALPI--- 82

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
              I G  V P F++   A S  + A++AEI R+G+ ++ +GQMEA  +LG++  +    
Sbjct: 83  ---ILGVRVEP-FVAAVAACSINSGAYVAEIFRAGIQSIDKGQMEAGRSLGMSWGQTMIH 138

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQA R IIP L ++++ +LK+SSL   +GF +L   G  II  T  ++EI      I
Sbjct: 139 IVIPQAFRRIIPQLGNEFIAMLKDSSLVSVIGFEELTRKGQLIIASTYGSLEIWTAVAII 198

Query: 374 YLSLSIMIALFMNRLNAK 391
           YL +++ I  F+  L  +
Sbjct: 199 YLIMTLSITRFVAFLEKR 216


>gi|37681432|ref|NP_936041.1| ABC-type glutamine transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37200184|dbj|BAC96012.1| ABC-type glutamine transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 246

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 31/183 (16%)

Query: 191 VFSFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +F+  LG++++L A        RL+R + E   +A+P+L +  ++ +GLPTL+ ++L + 
Sbjct: 57  LFAMTLGLMVALPALSPRKSLQRLNRIYVEVI-RAIPVLVLLLWVYYGLPTLLDVSLDH- 114

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 + +  IAL+   +AF+AE+ R G+ ++ RGQ EAA +L
Sbjct: 115 ----------------------YWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSL 152

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +  RLV+LPQA R ++P L +Q++ +LK SSL   +G +DL      ++      
Sbjct: 153 GLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLP 212

Query: 364 IEI 366
           +EI
Sbjct: 213 LEI 215



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  +G +V    LS  K +  + R+YVEV R IP LV++ ++
Sbjct: 41  LIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWV 100

Query: 149 YKSVLSVLPIP-DH 161
           Y  + ++L +  DH
Sbjct: 101 YYGLPTLLDVSLDH 114


>gi|257077631|ref|ZP_05571992.1| amino acid ABC transporter [Enterococcus faecalis JH1]
 gi|256985661|gb|EEU72963.1| amino acid ABC transporter [Enterococcus faecalis JH1]
          Length = 149

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 88/153 (57%), Gaps = 7/153 (4%)

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L + ++F  P +  FN        P F++  I L+   +A+I+EIVR G+ AVP GQMEA
Sbjct: 3   LAFFIYFGLPGVLGFNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEA 55

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           + +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+ +
Sbjct: 56  SRSLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVAR 115

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T Q+  +  +   IYL L   +      L  K+
Sbjct: 116 TLQSTMVYFVIALIYLILITSLTKLAKNLEKKV 148


>gi|197336799|ref|YP_002157984.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11]
 gi|197314051|gb|ACH63500.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11]
          Length = 286

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 1/160 (0%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L L  L  +   D  +L QF F G + +     +  + +   +AA+I E+VRSGL A
Sbjct: 128 VPLLGLENLLREHSGDINLLQQFLF-GSANLWENLTAGVLCIGMISAAYIGEVVRSGLDA 186

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA  LGL+     R ++ PQ  + IIPPL  Q ++L+K+SS+   +   +L  
Sbjct: 187 IPKGQHEAAKTLGLSTWHRYRYIIAPQVFKVIIPPLAGQCISLVKDSSIISLISIQELTF 246

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  + N +G   EI ++  F Y  L  M++   N    K
Sbjct: 247 VGTEMANSSGMIFEIWIVVAFCYFILCFMLSQLFNYWERK 286



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
            G +PY  D  ++T  L     TFW    GM+ A   G L+G GR S   ++  +   Y+
Sbjct: 54  DGSLPYFFDGLFSTLRL-----TFW----GMLFAICFGVLLGLGRSSNLTVIRALSNSYI 104

Query: 134 EVFRNIPPLV 143
           ++ RNIPPLV
Sbjct: 105 QLIRNIPPLV 114


>gi|110802404|ref|YP_697895.1| amino acid ABC transporter permease [Clostridium perfringens SM101]
 gi|110682905|gb|ABG86275.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens SM101]
          Length = 223

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 77/109 (70%), Gaps = 1/109 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  IA+S  +AA+++EI+R+G+ AV +GQ+EAA +LG+T   A RL++LPQA+++I+P +
Sbjct: 96  SCIIAISLNSAAYVSEIIRAGIDAVDKGQLEAARSLGMTEGMAMRLIILPQAIKNILPAI 155

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-IILIWMFIYL 375
            ++++ ++K SS+A  +G A+L+     +   T +  E +I+I MF ++
Sbjct: 156 GNEFVAIIKESSMASTIGVAELMYSSKIVTGATYKGFEPLIVIAMFYFV 204


>gi|315638191|ref|ZP_07893373.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter upsaliensis JV21]
 gi|315481727|gb|EFU72349.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter upsaliensis JV21]
          Length = 250

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG++AVP+GQ EA+ + G T+ +  R +++PQ ++ I+PP+++Q
Sbjct: 122 LGIGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIIVPQTIKIILPPMSNQ 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KN+S+ + VG  +L+S   +     G      +   F+Y  +   +A F      
Sbjct: 182 MINLIKNTSVLLIVGGVELMSTADSYAADYGNYAPAYIFAAFLYFIVCYPLAYFAKFYEE 241

Query: 391 KI 392
           K+
Sbjct: 242 KL 243



 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T  ++   ++ A + GT+ G    S   ++    R+YVE+F+N P ++ IFFLY
Sbjct: 47  GFIYTLQVSVLALLIAVVFGTIGGVMATSKIAVLRAYTRIYVEIFQNTPLVIQIFFLY 104


>gi|296134851|ref|YP_003642093.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
 gi|294338804|emb|CAZ87138.1| Glutamate/aspartate transport system permease protein gltJ
           [Thiomonas sp. 3As]
 gi|295794973|gb|ADG29763.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
          Length = 242

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 25/169 (14%)

Query: 190 FVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +V + VLG VL +  T   R +      + +  + +PLL       F LP+++       
Sbjct: 37  WVIAMVLGSVLGVVRTTKHRFWVMLGNGYVELFRNIPLLVQFFLWYFVLPSVI------- 89

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAA 300
                P L +F     + V P    +  A+ C   +TAA IAE V+SG+ ++PRGQ  A 
Sbjct: 90  -----PPLKRF----ANAVDPGTFQILTAVVCLGLFTAARIAEQVKSGIQSLPRGQTFAG 140

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +ALGLT  +  R VLLP A R IIPPLTS+ +NL+KNS++A ++G  +L
Sbjct: 141 LALGLTPTQTYRYVLLPMAYRIIIPPLTSESMNLVKNSAVAYSIGLTEL 189



 Score = 43.5 bits (101), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            D+++  ++L G   T  L     + A ++G+++G  R + ++    +   YVE+FRNIP
Sbjct: 14  GDTTWGMSLLSGLEYTLLLVVCAWVIAMVLGSVLGVVRTTKHRFWVMLGNGYVELFRNIP 73

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV  F  Y  + SV+P
Sbjct: 74  LLVQFFLWYFVLPSVIP 90


>gi|218676308|ref|YP_002395127.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32]
 gi|218324576|emb|CAV26094.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32]
          Length = 266

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 21/209 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            I + S V  +++ L  T L R+ +   G+ L   Y+   LI   P LV I   Y L+F 
Sbjct: 70  NISLISLVATLIIGL-TTALLRNSNSVVGRTLATSYVE--LIRNTPLLVQI---YLLYFV 123

Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PVLG             F +  +AL+ +  A+ AEI R+GL  + RGQ EAA +LGL+
Sbjct: 124 FGPVLGL----------DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSLGLS 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                  V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T    EI
Sbjct: 174 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 233

Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAK 391
                +I++ + LSLS + A   ++L A 
Sbjct: 234 WFSVAIIYLALTLSLSAVAAWLEHKLGAN 262


>gi|197284335|ref|YP_002150207.1| glutamate/aspartate ABC transporter permease [Proteus mirabilis
           HI4320]
 gi|227358521|ref|ZP_03842846.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
 gi|194681822|emb|CAR41082.1| glutamate/aspartate ABC transporter, permease protein [Proteus
           mirabilis HI4320]
 gi|227161232|gb|EEI46306.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
          Length = 224

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 75/127 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G+ ++ +GQ  A++ALG+T  +  RLV+LPQA R++I
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIQSISKGQFSASLALGMTKSQTMRLVILPQAFRAMI 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +   D       I  + G  +E+IL   F+Y  +S   ++ 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLTDFFRTAANIGERDGTQVEMILFAGFVYFIISFSASML 215

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 216 VNFLKKR 222



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149
           G V T  +  + ++   + GT++   RLS  K ++W    YV  FR+IP ++V+ + Y  
Sbjct: 19  GMVITLKITITAIVIGILWGTILAVMRLSTFKPISWFAAAYVNTFRSIPLVMVLLWFYLI 78

Query: 150 -----KSVLSVLPIPD 160
                ++VL + P  D
Sbjct: 79  VPNILQNVLGLSPKSD 94


>gi|228956816|ref|ZP_04118601.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228802857|gb|EEM49690.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 251

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 29  TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        SP F +  IAL+ +  A+I EI R  + +V 
Sbjct: 85  LIVQIAILY-----------FGITSVIVFSP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 192

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 235



 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 28  STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 87  VQIAILYFGITSVI 100


>gi|229148755|ref|ZP_04277005.1| Amino acid ABC transproter, permease [Bacillus cereus m1550]
 gi|228634763|gb|EEK91342.1| Amino acid ABC transproter, permease [Bacillus cereus m1550]
          Length = 251

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 29  SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 85  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 192

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLENRLQRKE 235



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 28  SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 87  VQIAILYFGITSVV 100


>gi|300715836|ref|YP_003740639.1| Glutamate/aspartate transport system permease [Erwinia billingiae
           Eb661]
 gi|299061672|emb|CAX58788.1| Glutamate/aspartate transport system permease [Erwinia billingiae
           Eb661]
          Length = 225

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGIVSIARGQGSAALALGMTRWQSMQLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI    G  IE++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGINNGTEIEMVLFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  K
Sbjct: 216 VSYLKKK 222



 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  +  + +I   + GTL+   RLS+ K V+W  R+YV +FR++P ++V+ + Y  
Sbjct: 19  GMVITLKITVTAIIFGIVWGTLLAVMRLSSFKPVSWFARLYVNLFRSVPLVMVLLWFYLV 78

Query: 152 VLSVL 156
           V S L
Sbjct: 79  VPSFL 83


>gi|259908983|ref|YP_002649339.1| glutamine ABC transporter permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224964605|emb|CAX56118.1| Glutamine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283478993|emb|CAY74909.1| glutamine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 219

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 114/206 (55%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V   V G+++ L A   +R +     + + L++I   LI G P +V +   Y   F  
Sbjct: 25  ISVLGLVGGVIIGLVAG-FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   FN +    + P F +  + +   + A+IAEI R  ++++ RG  EA +ALGL+ R
Sbjct: 79  PM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSINRGFREAGLALGLSSR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               IYL ++++++  + RL  ++ +
Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218


>gi|292487613|ref|YP_003530485.1| putative glutamate/aspartate ABC transporter inner membrane protein
           [Erwinia amylovora CFBP1430]
 gi|292898852|ref|YP_003538221.1| glutamate/aspartate ABC transporter permease [Erwinia amylovora
           ATCC 49946]
 gi|291198700|emb|CBJ45809.1| glutamate/aspartate ABC transporter, permease protein [Erwinia
           amylovora ATCC 49946]
 gi|291553032|emb|CBA20077.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia amylovora CFBP1430]
 gi|312171720|emb|CBX79978.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 225

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALALGMTQWQSMQLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI    G  IE++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  K
Sbjct: 216 VSYLKKK 222



 Score = 43.1 bits (100), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149
           G V T  + F+ ++   I GTL+   RLS+ K ++W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPLSWFAKIYVNLFRSVPLVMVLLWFYLV 78

Query: 150 -----KSVLSVLPIPD 160
                + VL + P  D
Sbjct: 79  VPGFLQQVLGLSPKTD 94


>gi|293192922|ref|ZP_06609766.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Actinomyces odontolyticus F0309]
 gi|292819978|gb|EFF78977.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Actinomyces odontolyticus F0309]
          Length = 320

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 23/182 (12%)

Query: 224 ISTFLIFG--LPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCY 276
           I T LIF   LPTL       +L F  P LG     +  F   +  +P +M+ +I L   
Sbjct: 111 IYTQLIFWSLLPTLY-----PKLSFGVPFLGSLWGWELTFDTATYFTPFWMA-FIGLGLN 164

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEI+R+GL++VP+GQ EAA ALG+      R ++LPQAMR I+PP+ ++ +++LK
Sbjct: 165 EGAYLAEIMRAGLLSVPKGQWEAATALGMPRGTIFRRIILPQAMRVIVPPIGNETISMLK 224

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL---IWMFIYLSLSIMIALFMNRLN 389
            +SL  A+ F   ++    I  Q GQA    + +++   IW  +  SL + I  F+ +  
Sbjct: 225 TTSLVSAIPFTLELTF---IARQRGQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEKYY 281

Query: 390 AK 391
            K
Sbjct: 282 GK 283


>gi|188534335|ref|YP_001908132.1| glutamine ABC transporter permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188029377|emb|CAO97254.1| Glutamine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 219

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 114/206 (55%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V   V G+++ L A   +R +     + + L++I   LI G P +V +   Y   F  
Sbjct: 25  ISVLGLVGGVIIGLVAG-FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   FN +    + P F +  + +   + A+IAEI R  ++++ RG  EA +ALGL+ R
Sbjct: 79  PM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSINRGFREAGLALGLSGR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               IYL ++++++  + RL  ++ +
Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218


>gi|269123376|ref|YP_003305953.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptobacillus moniliformis DSM 12112]
 gi|268314702|gb|ACZ01076.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptobacillus moniliformis DSM 12112]
          Length = 510

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 113/210 (53%), Gaps = 23/210 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLL-----YISTFLIF--GLPTLVLIALKYQL 244
           F F++G++LSL   R  R+ ++K+  ++ +      ++S ++ F  G P +V   + Y  
Sbjct: 305 FGFIIGLILSLL--RDERNVNKKSWLSIVIYNIFKYFVSIYVTFIRGTPMIVQAIIFYY- 361

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F+ I G  + P   S  I +S  T A+I EIVR G+ ++ +GQ EAA ALG
Sbjct: 362 --------GFSQITGINI-PALTSALIIVSYNTGAYITEIVRGGIDSIEKGQYEAAQALG 412

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + H    R V+LPQA+R+++P + ++++  +K++S+  ++G  +L +   +I+    +  
Sbjct: 413 MNHFNIMRKVILPQAIRNVLPSVANEFIINIKDTSVLFSIGVTELFTTSKSIVGSHVRYY 472

Query: 365 EIILIWMFIYL----SLSIMIALFMNRLNA 390
           E+ +I   IY     SLS +   F  +++ 
Sbjct: 473 EVFVITCAIYFVLTYSLSKLFRYFEKKMDG 502


>gi|187735937|ref|YP_001878049.1| polar amino acid ABC transporter, inner membrane subunit
           [Akkermansia muciniphila ATCC BAA-835]
 gi|187425989|gb|ACD05268.1| polar amino acid ABC transporter, inner membrane subunit
           [Akkermansia muciniphila ATCC BAA-835]
          Length = 494

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 20/210 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           FS +LGI++  F   + R  H+KTG      AL  LY++  +I G P +V + + Y + F
Sbjct: 300 FSVLLGILVG-FVVAVIRATHDKTGNLRFLNALCKLYLT--VIRGTPVVVQLLMIYFVIF 356

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       GS    + +   +A    + A++AEI+R G++++ +GQ EA  +LGL 
Sbjct: 357 ------------GSVDVSKVLVAVVAFGFNSGAYVAEIIRGGIMSIDKGQFEAGRSLGLG 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    ++LPQA ++++P L ++++ LLK +S++  +   DL   G  I +QT  A   
Sbjct: 405 YAQTMIYIILPQAFKNVLPSLGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMP 464

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     IYLS+ ++ +  + +L  K+   E
Sbjct: 465 LTAVALIYLSVVMLFSWMLGKLERKLKNNE 494


>gi|259416063|ref|ZP_05739983.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
 gi|259347502|gb|EEW59279.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
          Length = 268

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 22/215 (10%)

Query: 195 VLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFD 247
           VLG+ L+L A       R    F+ +  + +P++ +  ++ F L P LV +         
Sbjct: 64  VLGMALALGADSRWLVLRQICRFYVEVVRGVPIIVLLLYVAFVLAPALVDL--------- 114

Query: 248 KPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  LG  +FIG   +     P      +AL    +AFIAE+ R+GL +VP GQ+EAA AL
Sbjct: 115 RNWLG--SFIGLEEIRTRNFPLLWRAIVALMIAYSAFIAEVFRAGLQSVPEGQVEAAKAL 172

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R ++ PQA+R+I+PPL + ++ L+K+SSL   +G  D+  +G        + 
Sbjct: 173 GLNCWQRFRFIVFPQAIRTILPPLGNDFVALVKDSSLVSVLGVLDITQLGKVTAASNFRY 232

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E   +   IYL+++I ++L +  L   +  K+ +
Sbjct: 233 FETYNMVALIYLAMTISLSLGLRALERHLRNKQDQ 267


>gi|229042255|ref|ZP_04190007.1| Amino acid ABC transproter, permease [Bacillus cereus AH676]
 gi|229108024|ref|ZP_04237650.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-15]
 gi|229125851|ref|ZP_04254876.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-Cer4]
 gi|229143144|ref|ZP_04271576.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST24]
 gi|228640225|gb|EEK96623.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST24]
 gi|228657509|gb|EEL13322.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-Cer4]
 gi|228675424|gb|EEL30642.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-15]
 gi|228727046|gb|EEL78251.1| Amino acid ABC transproter, permease [Bacillus cereus AH676]
          Length = 251

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 29  SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 84

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 85  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 132

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 133 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 192

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 193 LSIAAGNFQQLDTYIIVGAYYLILVLLFTYFVNLLEKRLQRKE 235



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 28  SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 86

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 87  VQIAILYFGITSVV 100


>gi|239626406|ref|ZP_04669437.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239516552|gb|EEQ56418.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 281

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 102/190 (53%), Gaps = 20/190 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFDKP 249
           F+ +LG++  LF          K  K +  +YI   +I G P LV + + Y       +P
Sbjct: 86  FATILGVIFGLFKVS-----DFKALKFIANIYID--IIRGTPLLVQVFIMYYGVGSMLRP 138

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q+N IGG+     F +  + LS    A++AEI+R G+ AV +GQMEAA +LGL++ K
Sbjct: 139 YGFQWNMIGGA-----FSAGCVTLSLNAGAYMAEIIRGGIEAVDKGQMEAARSLGLSYGK 193

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+LPQA R+++P + +Q++  LK++SL   +G  +L      I       +     
Sbjct: 194 AMRKVILPQAFRTMLPTIINQFIISLKDTSLISVIGPRELTQNSKIIAANASSMV----- 248

Query: 370 WMFIYLSLSI 379
            M IYLS++I
Sbjct: 249 -MPIYLSVAI 257



 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 15/142 (10%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           ATI+G + G  ++S  K + +I  +Y+++ R  P LV +F +Y  V S+L         P
Sbjct: 87  ATILGVIFGLFKVSDFKALKFIANIYIDIIRGTPLLVQVFIMYYGVGSML--------RP 138

Query: 167 FGMFLNNRGLSFP--TLTMDTNAKIFVFSFVLGIVLSLFATRL--SRHFHEKTGKALPLL 222
           +G   N  G +F    +T+  NA  ++   + G + ++   ++  +R      GKA+  +
Sbjct: 139 YGFQWNMIGGAFSAGCVTLSLNAGAYMAEIIRGGIEAVDKGQMEAARSLGLSYGKAMRKV 198

Query: 223 YISTFLIFGLPTLV---LIALK 241
            +       LPT++   +I+LK
Sbjct: 199 ILPQAFRTMLPTIINQFIISLK 220


>gi|220920916|ref|YP_002496217.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219945522|gb|ACL55914.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 232

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 74/119 (62%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + EF+   IA+    AA+I+E +RSGL A+P+GQ EA+ +LG  + +  R+++LPQAMR 
Sbjct: 98  NSEFLFAAIAIGLCMAAYISEDLRSGLRAIPKGQYEASQSLGFGYAETMRVIVLPQAMRV 157

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +P L +Q L L KN+SLA+A+G A+L      I + T +  E   I   +YL LS  I
Sbjct: 158 SLPALVNQTLLLFKNTSLAMAIGVAELTYRTREIESATFRTFEAFAIATALYLILSFTI 216



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP------IPDHS 162
           IGTL+   R++ N+ V W    YVE  RN+P LV I F Y  V ++LP      + DH+
Sbjct: 40  IGTLLAVVRVAGNRWVEWAIAAYVEFQRNVPMLVHILFWYFGVAALLPDAIADWVNDHN 98


>gi|57242094|ref|ZP_00370034.1| amino acid ABC transporter, permease protein [Campylobacter
           upsaliensis RM3195]
 gi|57017286|gb|EAL54067.1| amino acid ABC transporter, permease protein [Campylobacter
           upsaliensis RM3195]
          Length = 250

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG++AVP+GQ EA+ + G T+ +  R +++PQ ++ I+PP+++Q
Sbjct: 122 LGIGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIIVPQTIKIILPPMSNQ 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KN+S+ + VG  +L+S   +     G      +   F+Y  +   +A F      
Sbjct: 182 MINLIKNTSVLLIVGGVELMSTADSYAADYGNYAPAYIFAAFLYFIVCYPLAYFAKFYEE 241

Query: 391 KI 392
           K+
Sbjct: 242 KL 243



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T  ++   ++ A + GT+ G    S   ++    R+YVE+F+N P ++ IFFLY
Sbjct: 47  GFIYTLQVSVLALLIAVVFGTIGGVMATSKIAVLRAYTRIYVEIFQNTPLVIQIFFLY 104


>gi|297156307|gb|ADI06019.1| putative glutamate ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 214

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 9/122 (7%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P F    +AL CYT+AFI E VRSG+  VP GQ EAA +LG+   +    V+LPQA R
Sbjct: 80  VLPFFTFAVLALGCYTSAFICEAVRSGINTVPVGQGEAARSLGMNFPQTLGSVVLPQAFR 139

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSI 379
           ++IPP+ S  + L KNS++A +    +L+   GT   +N+ G +I    IW F++++L  
Sbjct: 140 TVIPPIGSTLIALAKNSAIAGSFSVTELL---GTYKPLNERGYSI----IWTFVWIALGY 192

Query: 380 MI 381
           +I
Sbjct: 193 LI 194


>gi|86144264|ref|ZP_01062596.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85837163|gb|EAQ55275.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 265

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 21/209 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            I + S V  +++ L  T L R+ +   G+ L   Y+   LI   P LV I   Y L+F 
Sbjct: 69  NISLISLVATLIIGL-TTALLRNSNSVVGRTLATSYVE--LIRNTPLLVQI---YLLYFV 122

Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PVLG             F +  +AL+ +  A+ AEI R+GL  + RGQ EAA +LGL+
Sbjct: 123 FGPVLGL----------DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSLGLS 172

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                  V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T    EI
Sbjct: 173 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 232

Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAK 391
                +I++ + LSLS + A   ++L A 
Sbjct: 233 WFSVAIIYLALTLSLSAVAAWLEHKLGAN 261


>gi|239833358|ref|ZP_04681686.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821421|gb|EEQ92990.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 224

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 30/241 (12%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D SIV P+   L         LT+   A  F+ SFVLGI  +L         +     A 
Sbjct: 10  DFSIVTPYTDLLLTGLWWTLVLTV---ASAFL-SFVLGIAFALVV------LYAPAILAW 59

Query: 220 PLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           P+ +   +L  G P L+ + L Y    Q+  D P LG               +  I LS 
Sbjct: 60  PVRFF-MWLFMGTPLLLQLFLIYFGLVQIGIDIPALG---------------AGIIGLSL 103

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + A + A+I+R+G++AV  GQME A ++G +H +A R V++PQA+R+ IPP+ +  + LL
Sbjct: 104 HFAVYNADIIRAGIVAVDPGQMEGARSIGFSHGQALRYVVIPQAIRNTIPPIGNNMIVLL 163

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K++SL   +G A+LV      I++T    E  +    IY  +++++   + R+  K+ + 
Sbjct: 164 KDTSLVSIIGIAELVHSAQLAISETFSPFEFYITVAAIYYVVNLVLEAGLRRIERKVEVT 223

Query: 396 E 396
            
Sbjct: 224 R 224


>gi|303254039|ref|ZP_07340157.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|302599019|gb|EFL66047.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
          Length = 227

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 114/208 (54%), Gaps = 17/208 (8%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+ F  R          K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + Q   +G        +   + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  + A
Sbjct: 83  I-QVGILGVDL--SRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNA 139

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L  
Sbjct: 140 MRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLFA 199

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
            F YL ++ ++ + +      +   +KK
Sbjct: 200 AFYYLIMTSILTVALKAFEKHMGQGDKK 227


>gi|325168661|ref|YP_004280451.1| amino acid ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325064384|gb|ADY68073.1| amino acid ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 290

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 10/220 (4%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A   VF    G ++++ AT           KA+ + ++  F   G+P +V I  
Sbjct: 68  LTLQLTAGAMVFGTAFGCIVAVMATS-----QNIVLKAIAVAFVWWFR--GVPLIVQIFF 120

Query: 241 KYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +    P+  +G ++      V+P     ++AL  + AA ++EI+R GL AV RGQ E
Sbjct: 121 WFNIALFIPMVGIGTYSISINDLVTPALAG-FLALGLHEAANMSEIIRGGLTAVDRGQRE 179

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LGL   +  R V+LPQA+R I+PP  +Q + +LK S++   +G  DL++    I  
Sbjct: 180 AASSLGLQPLQTLRTVVLPQAIRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYA 239

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    IE++ +    YL ++ + ++  + L   +A K + 
Sbjct: 240 RNFLVIELLCVASLWYLLITTVASVGQHFLEKHLAPKGRD 279


>gi|326423793|ref|NP_759985.2| putative amino acid ABC transporter permease [Vibrio vulnificus
           CMCP6]
 gi|319999159|gb|AAO09512.2| Putative amino acid ABC transporter, permease protein [Vibrio
           vulnificus CMCP6]
          Length = 246

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 100/183 (54%), Gaps = 31/183 (16%)

Query: 191 VFSFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +F+  LG++++L A        RL+R + E   +A+P+L +  ++ +GLPTL+ ++L + 
Sbjct: 57  LFAMTLGLMVALPALSPRKSLQRLNRIYVEVI-RAIPVLVLLLWVYYGLPTLLDVSLDH- 114

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 + +  IAL+   +AF+AE+ R G+ ++ RGQ EAA +L
Sbjct: 115 ----------------------YWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSL 152

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +  RLV+LPQA R ++P L +Q++ +LK SSL   +G +DL      ++      
Sbjct: 153 GLNYWQKMRLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLP 212

Query: 364 IEI 366
           +EI
Sbjct: 213 LEI 215



 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF +T  ++   M+ A  +G +V    LS  K +  + R+YVEV R IP LV++ ++
Sbjct: 41  LIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWV 100

Query: 149 YKSVLSVLPIP-DH 161
           Y  + ++L +  DH
Sbjct: 101 YYGLPTLLDVSLDH 114


>gi|302538462|ref|ZP_07290804.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
 gi|302447357|gb|EFL19173.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
          Length = 276

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 31/212 (14%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTL---VLIALKYQ 243
           F+F  VLG+V++L   RLS           P  ++++    L  GLP L   + + +   
Sbjct: 81  FLFGLVLGLVIALM--RLS--------SVAPYRWVASVYIELFRGLPALLIFIFVGVAVP 130

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L F          I G T    +  + + L    AA++AE +R+G+ AVP+GQMEAA +L
Sbjct: 131 LAFPG------TAIPGGT----YGKVALGLGLVAAAYMAETIRAGIQAVPKGQMEAARSL 180

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
           G +H +A   V++PQA R +IPPLT++ + L K+SSL + +G      +L   G  + ++
Sbjct: 181 GFSHGRAMVSVVIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASE 240

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  +   IL+    YL +++ ++  + RL A+
Sbjct: 241 TANSTP-ILVAGLCYLLVTVPLSFVVRRLEAR 271



 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +   NT     SG +   ++G ++   RLS+     W+  VY+E+FR +P L++  F+
Sbjct: 66  ITIALRNTVVYTLSGFLFGLVLGLVIALMRLSSVAPYRWVASVYIELFRGLPALLIFIFV 125

Query: 149 YKSVLSVLP 157
             +V    P
Sbjct: 126 GVAVPLAFP 134


>gi|209551328|ref|YP_002283245.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537084|gb|ACI57019.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 270

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 20/225 (8%)

Query: 178 FPTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           F T+       +FV   +FVL  VL L    L      +  + +   YI   +I G+P L
Sbjct: 43  FRTVVNGVGITVFVTLVAFVLATVLGLGICLLGMA-DSQIARQIARFYIE--IIRGIPIL 99

Query: 236 VLIALKYQLHFDKPVL-GQFNFIGGSTVSPEF--------MSLY----IALSCYTAAFIA 282
           VL  L Y      P L   +NF+    VS           +SL     IAL+   ++FIA
Sbjct: 100 VL--LFYVAFVGAPALVAGYNFLISPLVSSGMAEPILVRDLSLMWRAIIALTIGYSSFIA 157

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+G  +V  GQ+EAA ALGL+  +  R V+ PQA+R I PPL++ +++++K+SSL  
Sbjct: 158 EIFRAGFQSVDLGQIEAAKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVS 217

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +G AD+  +G      + +  E   I  +IYL L+I ++L + R
Sbjct: 218 VLGVADITQMGKVYAAGSFRFFETYSIVTYIYLILTIGLSLALRR 262


>gi|302338915|ref|YP_003804121.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636100|gb|ADK81527.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 298

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 76/125 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  Y  ++IAEI++SG+ +V RGQ EA+ +LGL+    TRL++LPQA R+ +P
Sbjct: 166 FLSAVVTLGIYEGSYIAEIIQSGIRSVDRGQWEASYSLGLSSFDRTRLIILPQAARNALP 225

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            LT Q+++ +K+SS+   +  A+L   G  +   T + +EI      +Y  L+   ++  
Sbjct: 226 ALTGQFISTMKDSSIVSVISIAELTFQGMELTASTYRTLEIWSAVTLLYFLLTFTASILS 285

Query: 386 NRLNA 390
           +R+ +
Sbjct: 286 SRIES 290



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF+ T  L+    I A  IGT+VG GRL  N+    +  +YV + RN+PPLV++F  
Sbjct: 65  LLKGFLTTIRLSIWSSIIAFFIGTVVGVGRLVRNRFFRLLSGLYVSLIRNLPPLVLVFIF 124

Query: 149 Y 149
           Y
Sbjct: 125 Y 125


>gi|261368004|ref|ZP_05980887.1| glutamine ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
 gi|282569991|gb|EFB75526.1| glutamine ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
          Length = 255

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 83/128 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+++EI+R GL+AV  GQMEA  +LGL +     L+++PQA+RSI+P L ++
Sbjct: 128 LALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYITTMVLIIIPQAIRSILPSLGNE 187

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK++SL   +G  +L+     ++N+T +A+  +L    IYL L ++ +  + +L  
Sbjct: 188 FIILLKDTSLITVIGGKELLYAAQGVMNRTYEAMFPLLGVAAIYLVLVLLFSALLGKLER 247

Query: 391 KIALKEKK 398
           ++A  +++
Sbjct: 248 RLAQSDRR 255


>gi|317053038|ref|YP_004119392.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953365|gb|ADU72836.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 314

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 3/150 (2%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P LG F+    + V   + +  + L     A+++EIVRSGL AVP GQ EAA ALG++  
Sbjct: 152 PSLGAFD---ANKVITVYAAALLGLGLNEGAYMSEIVRSGLSAVPNGQREAAEALGMSSF 208

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V+LPQAMR IIPP  +Q + +LK +SL   +   DL+     I     Q I +++
Sbjct: 209 RVMFRVILPQAMRIIIPPTGNQLIGMLKTTSLVSVIAMQDLLYSAQLIYTNNFQTIPLLI 268

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    YL L+ ++++  + L    A  E++
Sbjct: 269 VASLWYLVLTTVLSVLQHYLEKYFARSEQR 298



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  +I+ G   T WL  + M    ++GTL+   R+S N +++ +   Y+ +FR  P LV 
Sbjct: 71  FDDSIIAGLYTTAWLTLASMAIGIVLGTLIALMRMSKNPVLSTVASAYLWLFRGTPLLVQ 130

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL-TMDTNAKIFVFSFVL 196
           + F +   LS L  P  ++  PFG          P+L   D N  I V++  L
Sbjct: 131 LIFWFN--LSAL-YPQITLGFPFG----------PSLGAFDANKVITVYAAAL 170


>gi|37525272|ref|NP_928616.1| glutamate/aspartate transport system permease protein GltK
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36784699|emb|CAE13599.1| Glutamate/aspartate transport system permease protein GltK
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 224

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 18/212 (8%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLS--RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            AKI + + V+GI   L+ T L+  R    K       LY++ F    +P LV++ L + 
Sbjct: 23  TAKITIIAVVVGI---LWGTVLAVMRLSSVKALSWFATLYVNLFR--SVP-LVMVLLWFY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L    P L Q N +G   +SP+     +S  +A + + AA+ +EI+R+G+ ++ RGQ  A
Sbjct: 77  LIV--PSLVQ-NVLG---ISPKTDIRLISAMVAFAFFEAAYYSEIIRAGIQSISRGQSSA 130

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+ALG+T  ++ RLV+LPQA R++ P L +Q + L +++SL   +  AD       I  +
Sbjct: 131 ALALGMTPMQSMRLVILPQAFRAMTPLLLTQGIVLFQDTSLVYVLSLADFFRTAANIGER 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  +E+IL    +Y  +SI  ++ +N L  +
Sbjct: 191 DGTQVEMILFAGLVYFIISIAASMLVNYLKKR 222



 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++   + GT++   RLS+ K ++W   +YV +FR++P ++V+ + 
Sbjct: 16  LLQGLVITAKITIIAVVVGILWGTVLAVMRLSSVKALSWFATLYVNLFRSVPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD 160
           Y       ++VL + P  D
Sbjct: 76  YLIVPSLVQNVLGISPKTD 94


>gi|312958335|ref|ZP_07772856.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311287399|gb|EFQ65959.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 219

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 17/175 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS V G++  +      R  + K   A+  +Y+  F    +P LV +   Y L F  P+ 
Sbjct: 33  FSTVCGVLYGVL-----RTLNSKLINAVLRVYLELFR--AIPVLVWL---YLLFFGMPI- 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F G S   P F    + LS + A+ + E+VR  L ++PRGQ EA +++GL+  +  
Sbjct: 82  ----FFGLSI--PSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREAGLSIGLSDPQLY 135

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             VLLPQA++ + PP  + Y  ++K SSLAV +G  D++ VG  II +T +++ I
Sbjct: 136 GYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLI 190



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T  ++F  +  +T+ G L G  R   +KL+  + RVY+E+FR IP LV ++ L+
Sbjct: 19  GAAQTLSISFLSIAFSTVCGVLYGVLRTLNSKLINAVLRVYLELFRAIPVLVWLYLLF 76


>gi|313122913|ref|YP_004033172.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312279476|gb|ADQ60195.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 527

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNE 443

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N +  
Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503

Query: 391 KIALKE 396
            I   E
Sbjct: 504 HIEGPE 509


>gi|225405626|ref|ZP_03760815.1| hypothetical protein CLOSTASPAR_04847 [Clostridium asparagiforme
           DSM 15981]
 gi|225042846|gb|EEG53092.1| hypothetical protein CLOSTASPAR_04847 [Clostridium asparagiforme
           DSM 15981]
          Length = 233

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 120/233 (51%), Gaps = 20/233 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224
           F+ + G  + T+ +     I  F+ ++GIVL  F   + R  +EKT K     A+  +Y+
Sbjct: 16  FIEDDGWKYITVGLKNTLIITFFACLMGIVLG-FLVGMVRSTYEKTHKLKILNAICKVYL 74

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P +V + + Y + F            GS    + +   +A    + A++AEI
Sbjct: 75  T--VIRGTPVVVQLMIIYFVVF------------GSVRISKVLVAVLAFGINSGAYVAEI 120

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG++++  GQ+EA  +LG ++ +    +++PQA ++++P L +++++LLK +S+A  +
Sbjct: 121 FRSGIMSIDSGQLEAGRSLGFSYWQTMWYIIMPQAFKNVLPALCNEFISLLKETSVAGYI 180

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              DL   G  I ++T  A   +     IYL++ ++    +  L  ++   E+
Sbjct: 181 ALQDLTKGGDIIRSRTYSAFMPLFAVALIYLTIVMIFTKLIQILERRLRQSER 233


>gi|332073151|gb|EGI83630.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
          Length = 209

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 118/210 (56%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+         F +++ K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 15  ILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 64

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 65  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 119

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 120 NAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 179

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 180 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 209


>gi|170691879|ref|ZP_02883043.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143163|gb|EDT11327.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 245

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/133 (37%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 264 PEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           P+F+ +  ++L  YT + I E VR+G+ A P GQ  AA ALGLT  +A R VLLP A R+
Sbjct: 108 PQFLIASVVSLGVYTGSRICEQVRAGIQARPVGQFHAAFALGLTRAQAYRHVLLPVAFRT 167

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+ PLTS++L + KNS++A  +G  +L      +++ T Q  E  +     Y++L+  I 
Sbjct: 168 ILGPLTSEFLIISKNSAVASTIGLLELSGQARQLVDYTAQPYESFICVTLAYMALNFAIL 227

Query: 383 LFMNRLNAKIALK 395
             M  +  + AL 
Sbjct: 228 RGMRWIRRRTALH 240


>gi|308174445|ref|YP_003921150.1| glutamine ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307607309|emb|CBI43680.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens
           DSM 7]
          Length = 218

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 81/123 (65%), Gaps = 3/123 (2%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+ + +A ++EI+RSGL +V +GQ++AA + GLT+ +   LV++PQA+R ++PP+ SQ+
Sbjct: 94  ALTIFESAMLSEIIRSGLQSVEKGQIDAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQF 153

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++LLK++SLAV +   +L+     +  Q+   G    I L+   +Y +++  ++L   RL
Sbjct: 154 ISLLKDTSLAVVIALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYSLSLAARRL 213

Query: 389 NAK 391
            A+
Sbjct: 214 EAR 216


>gi|296135302|ref|YP_003642544.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
 gi|295795424|gb|ADG30214.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
          Length = 310

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 13/213 (6%)

Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V S V+G+ L   L   RLS   H          YI  +L  G P LV I   + +    
Sbjct: 80  VISMVIGVALGVLLAVMRLS---HNPMVSKASWFYI--WLFRGTPVLVQILFWFNITALY 134

Query: 249 PVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           P +G   ++F   + ++P F++  +AL     A++AEIVR+G+++V  GQ EA  ALG++
Sbjct: 135 PNIGFGSWSFDANNLITP-FVAAILALGLNEGAYMAEIVRAGILSVDEGQSEAGAALGMS 193

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQAMR I+PP  ++ +++LK +SL   +  +DL+     I +   + I +
Sbjct: 194 RLQIMRRVVLPQAMRVIVPPTGNEAISMLKTTSLVSVIAVSDLLYSAQLIYSVNYRTIPL 253

Query: 367 IL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L   IW  I  +L  +   ++ R   + A ++
Sbjct: 254 LLVASIWYLIVTTLLSIGQFYIERHFGRSATRQ 286


>gi|294339404|emb|CAZ87760.1| putative ABC-type amino acid transport system, permease component
           [Thiomonas sp. 3As]
          Length = 310

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 111/213 (52%), Gaps = 13/213 (6%)

Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V S V+G+ L   L   RLS   H          YI  +L  G P LV I   + +    
Sbjct: 80  VISMVIGVALGVLLAVMRLS---HNPMVSKASWFYI--WLFRGTPVLVQILFWFNITALY 134

Query: 249 PVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           P +G   ++F   + ++P F++  +AL     A++AEIVR+G+++V  GQ EA  ALG++
Sbjct: 135 PNIGFGSWSFDANNLITP-FVAAILALGLNEGAYMAEIVRAGILSVDEGQSEAGAALGMS 193

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQAMR I+PP  ++ +++LK +SL   +  +DL+     I +   + I +
Sbjct: 194 RLQIMRRVVLPQAMRVIVPPTGNEAISMLKTTSLVSVIAVSDLLYSAQLIYSVNYRTIPL 253

Query: 367 IL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L   IW  I  +L  +   ++ R   + A ++
Sbjct: 254 LLVASIWYLIVTTLLSIGQFYIERHFGRSATRQ 286


>gi|169630136|ref|YP_001703785.1| putative glutamate ABC transporter, permease [Mycobacterium
           abscessus ATCC 19977]
 gi|169242103|emb|CAM63131.1| Putative glutamate ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 286

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 93/175 (53%), Gaps = 21/175 (12%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   VF+  LG VL +   RLS H   +        +I + L+     +P L+L+
Sbjct: 72  TVTAAALSIVFALALGAVLGI--GRLSEHRAVR--------WICSALVEFFRAIPVLILM 121

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y L+  + V               F ++   LS Y  + IAEI+RSG+ ++P+GQ E
Sbjct: 122 VFSYYLYGQQAVFPSEYL--------AFAAVVTGLSLYNGSVIAEILRSGIQSLPKGQSE 173

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           AA+ALG+   +  RL+LLPQ++ +++P L SQ +  LK+S+L  A G+ ++V  G
Sbjct: 174 AAVALGMRKSQMMRLILLPQSISAMLPALISQMVIALKDSALGYAFGYIEVVRSG 228



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+   +++ T IL G + T   A   ++ A  +G ++G GRLS ++ V WIC   VE FR
Sbjct: 54  PFLRLNTWTTYILPGLLGTVTAAALSIVFALALGAVLGIGRLSEHRAVRWICSALVEFFR 113

Query: 138 NIPPLVVIFFLY 149
            IP L+++ F Y
Sbjct: 114 AIPVLILMVFSY 125


>gi|300312812|ref|YP_003776904.1| glutamate/aspartate ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300075597|gb|ADJ64996.1| ABC-type glutamate/aspartate transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 227

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 13/234 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D S V P  + +   GL    +++       VF  V G +L++   RLSRH         
Sbjct: 6   DFSAVTPAALRVLGDGL---LVSLKITLVAIVFGMVWGTLLAM--MRLSRH--------S 52

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL + +   +    ++ L+ +        P L Q  F           S  +A + + AA
Sbjct: 53  PLQWFAAGYVNLFRSIPLVMVLLWFFLIVPQLLQKLFGLSPANDLRMTSALVAFALFEAA 112

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R+G+ +V RGQM AA ALGLT+ +A  +V+LPQA R+++P L +Q + L +++S
Sbjct: 113 YYAEIIRAGINSVSRGQMAAAYALGLTYPQAMGMVILPQAFRNMVPLLLTQGIVLFQDTS 172

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L      AD      +I  + G+ IE++ +   +Y  +   ++L + R   K+A
Sbjct: 173 LVYVSALADFFGRAYSIGERNGRIIEMLFVAGAVYFIICFSMSLMVKRYRKKVA 226


>gi|330891010|gb|EGH23671.1| glutamine ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 233

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   +  +  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLTIS 213


>gi|307130487|ref|YP_003882503.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306528016|gb|ADM97946.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
          Length = 256

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 21/239 (8%)

Query: 160 DHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           DHS++L  G + N   G    TL +   A   V SF LG+++ L   RLS          
Sbjct: 10  DHSMLLLMGQYPNGPLGGVLCTLLISLLA--VVLSFPLGVLVGL--ARLSPWRG------ 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L + +T  ++ L  + L+ + +  +F  P+L   N  G       F ++   L  Y +
Sbjct: 60  --LRWAATAWVYTLRGIPLMMVVFWTYFCVPLLIGQNISG-------FSTMLCTLVIYES 110

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEIVR G+ A+P GQ EA+ ALG+++ K  RLV+LPQA+ + +P L SQ ++++K+S
Sbjct: 111 AYIAEIVRGGIQALPHGQYEASRALGMSYLKTLRLVVLPQALFNSLPSLVSQLVSIIKDS 170

Query: 339 SLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L   +   +L      + NQ   +  ++  I    Y  +   +    N+L + IA K 
Sbjct: 171 TLGYVINVPELTYAANQVSNQLLTKPFQVFAIVALSYYIICFSLTWLANKLESYIANKR 229


>gi|299541805|ref|ZP_07052128.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725543|gb|EFI66184.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus
           fusiformis ZC1]
          Length = 221

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 124/232 (53%), Gaps = 19/232 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYIS 225
           F + +  +G+ F  + +    ++ V S +LGI++ L FA  L +  + K  + +  +Y+ 
Sbjct: 8   FQILMETKGVFFKAMLL--TLELTVVSILLGIIIGLVFA--LLKISNIKILELISDIYV- 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            +L+ G P +V I   + L+F          I G  + P+F +  +AL+ +  A+I+EI+
Sbjct: 63  -YLVRGTPLIVQI---FILYFG---------ISGIFLLPDFWAASLALALHNGAYISEIL 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + +V  GQ EA  +LG+T     R ++LPQA R  +PPL +Q++  LK+SSLA  + 
Sbjct: 110 RGAIQSVDNGQFEAGRSLGMTKTLTLRRIILPQAFRRALPPLGNQFIISLKDSSLAAFIS 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L +V  T+ +     +  +LI    YL L  ++   +NR   K+A+ ++
Sbjct: 170 MNELFNVATTLGSNNFDEMTYLLIVAVYYLLLVALMTFVVNRTELKLAVSDR 221


>gi|134298610|ref|YP_001112106.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum reducens MI-1]
 gi|134051310|gb|ABO49281.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 222

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 80/136 (58%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P F +  +AL+ +  A+IAEI R  + ++ +GQMEAA +LG+++  + R ++LPQA R
Sbjct: 83  VLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEAARSLGMSYPLSMRRIILPQAFR 142

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             IPPL +Q++  LK+SSL   +G  ++         +  Q  E  L+    YL L I+ 
Sbjct: 143 RAIPPLGNQFIIGLKDSSLVAYLGVPEIYGTALYAQAENFQPFETYLVAGLYYLVLVIIF 202

Query: 382 ALFMNRLNAKIALKEK 397
           +  +N+L AK+ +++ 
Sbjct: 203 SFLVNKLEAKLNVEQN 218


>gi|300811497|ref|ZP_07091991.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497570|gb|EFK32598.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 527

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNE 443

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N +  
Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503

Query: 391 KIALKE 396
            I   E
Sbjct: 504 HIEGPE 509


>gi|259909119|ref|YP_002649475.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae
           Ep1/96]
 gi|224964741|emb|CAX56258.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae
           Ep1/96]
 gi|283479147|emb|CAY75063.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia pyrifoliae DSM 12163]
          Length = 225

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALALGMTQWQSMQLIVLPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI    G  IE++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  K
Sbjct: 216 VSYLKKK 222



 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-- 149
           G V T  + F+ ++   I GTL+   RLS+ K V+W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPVSWFAKIYVNLFRSVPLVMVLLWFYLV 78

Query: 150 -----KSVLSVLPIPD 160
                + VL + P  D
Sbjct: 79  VPGFLQQVLGLSPKTD 94


>gi|218437715|ref|YP_002376044.1| polar amino acid ABC transporter inner membrane protein [Cyanothece
           sp. PCC 7424]
 gi|218170443|gb|ACK69176.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7424]
          Length = 402

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 119/233 (51%), Gaps = 23/233 (9%)

Query: 168 GMFLNNRGLSFPT---LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           G+FL+   LS  +   LT+       V SF  G++L+L      R       + L + YI
Sbjct: 185 GLFLDLVPLSLISGLILTLSVAIVSIVLSFPFGVLLAL-----GRQSSLPVIRWLSIAYI 239

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAE 283
              LI G P   LI + +      P++          V P+ +   IA  + ++AA++AE
Sbjct: 240 E--LIRGFP---LIGILFMAQVMLPLVLPLG------VRPDSIVRAIAGFTLFSAAYLAE 288

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            VR GL +VPRGQ EAA ALGL       L++LPQA++++IP L  Q+++L K++SL   
Sbjct: 289 NVRGGLQSVPRGQTEAAKALGLNPLLVLSLIVLPQALKAVIPTLVGQFISLFKDTSLLAI 348

Query: 344 VGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           VG  DL+ +  +I+      G+ +E+ L   F+Y      ++L   ++  K++
Sbjct: 349 VGLVDLLGISQSILANPKYQGRNVEVYLFIGFMYWLCCSAMSLASRKIETKMS 401


>gi|138897015|ref|YP_001127468.1| amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|196249837|ref|ZP_03148533.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. G11MC16]
 gi|134268528|gb|ABO68723.1| Amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
 gi|196210713|gb|EDY05476.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. G11MC16]
          Length = 218

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 75/115 (65%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AEI R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP  ++++ L+K
Sbjct: 100 SAAYVAEIFRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL + +   +++  G     +  +  E  L   FIYL L++ ++   + L  K
Sbjct: 160 DSSLGMIIAAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSHYLERK 214


>gi|325685296|gb|EGD27410.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 527

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNE 443

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N +  
Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503

Query: 391 KIALKE 396
            I   E
Sbjct: 504 HIEGPE 509


>gi|291618614|ref|YP_003521356.1| YecS [Pantoea ananatis LMG 20103]
 gi|291153644|gb|ADD78228.1| YecS [Pantoea ananatis LMG 20103]
 gi|327394994|dbj|BAK12416.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Pantoea ananatis AJ13355]
          Length = 214

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 64/99 (64%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS Y  A+IAEI R G+ AVP+GQ E +  LGL+ R+    V+LPQ    ++P
Sbjct: 85  FAAGILGLSIYQGAYIAEIFRGGIEAVPKGQWEVSWILGLSRRQTFTSVILPQTRGIVLP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           PL  QYL+L+K++S+   +G ++L+  G  I+++ GQ +
Sbjct: 145 PLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPV 183


>gi|271966876|ref|YP_003341072.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
 gi|270510051|gb|ACZ88329.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptosporangium roseum DSM 43021]
          Length = 304

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           FD P L ++       ++P F +  + L+    A++AEIVR+G+ +V  GQ EAA ALG+
Sbjct: 138 FDGPKLIEWQ--ANELITP-FTAALLGLAINEGAYMAEIVRAGIRSVDPGQREAAEALGM 194

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +HR+  R V+LPQAMR IIPP  +Q++++LK +S+   +  A+L++V   I     + I 
Sbjct: 195 SHRQVLRRVVLPQAMRVIIPPTGNQFISMLKTTSMVSVIAGAELLTVSQRIYLGNFEVIA 254

Query: 366 IILIWMFIYLSLS 378
           ++++    Y+ L+
Sbjct: 255 MLIVASIWYIVLT 267


>gi|163745604|ref|ZP_02152964.1| ABC transporter permease protein [Oceanibulbus indolifex HEL-45]
 gi|161382422|gb|EDQ06831.1| ABC transporter permease protein [Oceanibulbus indolifex HEL-45]
          Length = 223

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 20/161 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250
           F  +LG+++ L      R +  K  + L +LY   F    +P LV LI + Y L F    
Sbjct: 37  FGGILGVLVCLV-----RLYAAKPFRLLAVLYTDIFR--AIPVLVVLILVYYALPF---- 85

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                      V   F++  IAL+   AA+ AE+VR+G+ AVPRGQ EA  ALGL+    
Sbjct: 86  --------AGIVFSSFVAATIALALVLAAYTAEVVRAGIEAVPRGQFEACDALGLSFATT 137

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            R V+LPQA R +IPPL S  + ++K++SLA  V   DL+ 
Sbjct: 138 MRKVILPQAFRMMIPPLASYAVAIMKDTSLASVVAMDDLLK 178



 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G VNT  L FS +    I+G LV   RL A K    +  +Y ++FR IP LVV+  +Y +
Sbjct: 23  GLVNTILLGFSAIFFGGILGVLVCLVRLYAAKPFRLLAVLYTDIFRAIPVLVVLILVYYA 82

Query: 152 V 152
           +
Sbjct: 83  L 83


>gi|315931225|gb|EFV10196.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 259

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%)

Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276
           L ++STF   LI G P LV + L Y +  +   LG  N ++ G           I LSC+
Sbjct: 94  LRFLSTFYIELIRGTPLLVQVLLMYYIIANN--LGLDNRYVAG----------VIILSCF 141

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q+ NL+K
Sbjct: 142 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 201

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL   +   +L      I + T   +E  +I    YL L++ I++F   L  K
Sbjct: 202 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERK 256



 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 41/82 (50%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F I      ++  ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + +
Sbjct: 37  CSFSISAYHFDFSVIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 96

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           +   Y+E+ R  P LV +  +Y
Sbjct: 97  LSTFYIELIRGTPLLVQVLLMY 118


>gi|304405143|ref|ZP_07386803.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304346022|gb|EFM11856.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 495

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 23/205 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFD 247
           +  FV G +LSLF          K     PL + +T    +  G P L+ +   + +++ 
Sbjct: 307 LLGFVWGSILSLF----------KISSVRPLQWFATVYTSVFRGTPLLLQL---FIIYYA 353

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L  ++        P  ++  +A    +AA+++E +R G++AV RGQ EAA+ALG+ +
Sbjct: 354 TPQLFDYDI-------PALLAAGLAFGLNSAAYLSETIRGGIMAVDRGQREAAMALGIPY 406

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R   R ++LPQA+++I+P L ++ + LLK SSL   +G  DL+     +   T +A E +
Sbjct: 407 RTMMRSIILPQAVKNILPALVNECVALLKESSLVSVIGVQDLMRRANVVQASTFRAFEAL 466

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
           L    IY  L +++    + L  ++
Sbjct: 467 LFAGAIYYCLVLILTSLAHLLERRL 491


>gi|302554086|ref|ZP_07306428.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471704|gb|EFL34797.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
          Length = 315

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 70/113 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L    AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+P
Sbjct: 155 FLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHAKTLRRIVIPQAMRVIVP 214

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           P  ++ +N+LK +SL   V + +L+     I   +G   E++ +    YL L+
Sbjct: 215 PTGNEVINMLKTTSLVSVVQYPELLRAAQDIGQTSGAPAEMLFLAASWYLLLT 267


>gi|182418113|ref|ZP_02949413.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum 5521]
 gi|237666123|ref|ZP_04526110.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377931|gb|EDT75471.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum 5521]
 gi|237658213|gb|EEP55766.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 219

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 75/111 (67%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+  +  IALS  ++A+++EI+R+G+ AV +GQMEAA +LG+  ++A   V++PQA ++I
Sbjct: 85  PDMATGIIALSLNSSAYVSEIIRAGIEAVDKGQMEAARSLGMNQKQAMFEVVIPQAFKNI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +P L +++++++K SS+   +G A+L+   G +   T   +E +++   IY
Sbjct: 145 LPALGNEFISVIKESSMVSVIGVAELMYNAGIVRGNTALGLEPVVVAAIIY 195


>gi|86151036|ref|ZP_01069252.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153144|ref|ZP_01071349.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121612505|ref|YP_001000623.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|167005552|ref|ZP_02271310.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85842206|gb|EAQ59452.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85844029|gb|EAQ61239.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87248894|gb|EAQ71857.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 261

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%)

Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276
           L ++STF   LI G P LV + L Y +  +   LG  N ++ G           I LSC+
Sbjct: 96  LRFLSTFYIELIRGTPLLVQVLLMYYIIANN--LGLDNRYVAG----------VIILSCF 143

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q+ NL+K
Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 203

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL   +   +L      I + T   +E  +I    YL L++ I++F   L  K
Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERK 258



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 42/82 (51%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + +
Sbjct: 39  CSFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           +   Y+E+ R  P LV +  +Y
Sbjct: 99  LSTFYIELIRGTPLLVQVLLMY 120


>gi|300692510|ref|YP_003753505.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
 gi|299079570|emb|CBJ52248.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
          Length = 227

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 77/125 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM A+ ALG+T+ +A RLV+LPQA R++IP L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFASYALGMTYGQAMRLVILPQAFRNMIPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      +D  +    I  + G+ +E++L    IY  +    ++ + R
Sbjct: 161 LTQAIILFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGLIYFVICFGASVLVKR 220

Query: 388 LNAKI 392
           L  K+
Sbjct: 221 LQKKV 225


>gi|121608198|ref|YP_996005.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552838|gb|ABM56987.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 222

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E +S  I    + AA+ +EI+R+G+ A+PRGQ+ A  ALG+T+ +  +LVLLPQ
Sbjct: 86  GRPIGAE-VSAVITFIAFEAAYFSEIMRAGIAAIPRGQVHAGQALGMTYAQNMQLVLLPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+++P L +Q + L +++SL  A+G  DL+          G+ IE  L    +Y +L 
Sbjct: 145 ALRNMLPVLLTQIIILFQDTSLVYAIGAYDLLKGFELAGKNFGRPIEAYLAATVLYFALC 204

Query: 379 IMIALFMNRLNAKIAL 394
             ++  + RL+ KIA+
Sbjct: 205 FTLSWLVKRLHRKIAI 220


>gi|149004460|ref|ZP_01829185.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|225861279|ref|YP_002742788.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|147757608|gb|EDK64628.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|225727024|gb|ACO22875.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|332076102|gb|EGI86568.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 209

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 118/210 (56%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+         F +++ K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 15  ILGVVLA---------FGQRS-KFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 64

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 65  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 119

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 120 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 179

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 180 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 209


>gi|186471432|ref|YP_001862750.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184197741|gb|ACC75704.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 215

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 66/101 (65%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS Y  A+IAE+ RSG+ AVP+GQ E +  LGL   +    V+LPQ  + ++P
Sbjct: 86  FAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVSQILGLGKMQTFFSVVLPQTGKIVLP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           PL  QYL+L+K++S+   +G ++L+  G  I+++ G+ +EI
Sbjct: 146 PLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRVGKPVEI 186


>gi|148986052|ref|ZP_01819073.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147921886|gb|EDK73012.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
          Length = 227

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 115/210 (54%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+            +  K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLAF----------GQCSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 83  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPK 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 138 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227


>gi|149007236|ref|ZP_01830900.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|221231612|ref|YP_002510764.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854330|ref|YP_002735842.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|298230612|ref|ZP_06964293.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298254377|ref|ZP_06977963.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298503171|ref|YP_003725111.1| amino acid ABC superfamily transporter permease [Streptococcus
           pneumoniae TCH8431/19A]
 gi|147761274|gb|EDK68241.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|220674072|emb|CAR68587.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225723507|gb|ACO19360.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|298238766|gb|ADI69897.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 227

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 116/210 (55%), Gaps = 21/210 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG+VL+ F  R          K  PL++++   ++   G P +V I + + L H + P 
Sbjct: 33  ILGVVLA-FGQR---------SKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + Q   +G   S + P  +     +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  +
Sbjct: 83  I-QIGILGVDFSRLIPGIL----IISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRLK 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L
Sbjct: 138 NAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLL 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F YL ++ ++ + +      +   +KK
Sbjct: 198 FAAFYYLIMTSILTVALKAFEKHMGQGDKK 227


>gi|315644842|ref|ZP_07897971.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315279784|gb|EFU43085.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 216

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 63/87 (72%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + LS +  A IAEIVRSGL++V +GQ+EAA A GL++ +  R V+LP A+R +
Sbjct: 86  PTFWAAVVGLSIFEGAMIAEIVRSGLVSVDKGQIEAARASGLSYMQTLRHVILPLALRRM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
            PP+ SQ+++L+K++SLAV +   +L+
Sbjct: 146 SPPMVSQFISLIKDTSLAVIISLPELM 172


>gi|291456221|ref|ZP_06595611.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Bifidobacterium breve DSM 20213]
 gi|291381498|gb|EFE89016.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Bifidobacterium breve DSM 20213]
          Length = 327

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++++  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLNA 390
           F YL ++ ++ +  +RL A
Sbjct: 264 FWYLLITSILMVCQSRLEA 282


>gi|160938084|ref|ZP_02085441.1| hypothetical protein CLOBOL_02979 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439078|gb|EDP16833.1| hypothetical protein CLOBOL_02979 [Clostridium bolteae ATCC
           BAA-613]
          Length = 226

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 24/187 (12%)

Query: 195 VLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           VLG++  LF        +L    +    +  PLL     +++G+ +++           K
Sbjct: 34  VLGVIFGLFKVSDFKVLKLVADVYIDIIRGTPLLVQVMIMMYGVGSVL-----------K 82

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P   Q++ IGG+     F +  +ALS    A++AEI+R G+ AV +GQMEAA +LGL++ 
Sbjct: 83  PYGFQWSNIGGA-----FTAGCVALSLNAGAYMAEIIRGGIEAVDKGQMEAARSLGLSYG 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           KA R V+LPQA R+++P + +Q++  LK++SL   +G  +L   G  I   +  A  ++ 
Sbjct: 138 KAMRKVILPQAFRTMLPSIINQFIISLKDTSLVSVIGPRELTQNGKIIAANS--ASMVMP 195

Query: 369 IWMFIYL 375
           IW+ + L
Sbjct: 196 IWICVAL 202


>gi|157693109|ref|YP_001487571.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157681867|gb|ABV63011.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 237

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 104/191 (54%), Gaps = 10/191 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R F     + L  LY+S F   G P +V L A  Y L F   VL + +   G T  P+ +
Sbjct: 45  RLFRIPVLRQLVTLYVSFFR--GTPLIVQLFAFFYGLPF---VLTKMSDTFGLTFHPDMV 99

Query: 268 S-LYIAL---SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           S L +AL   S ++AA + E+VRS L+AV +GQ+EAA  +G+T R+A   ++LPQA    
Sbjct: 100 SPLAVALMTFSLHSAAHLTEVVRSALLAVDKGQLEAAKIVGMTTRQAMMRIILPQAFVVA 159

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +Q + LLK +SL+  +G  +++ +   I N   Q +E  L+   IY  LSI   L
Sbjct: 160 LPNLGNQLIQLLKATSLSFTIGVLEIMGISRIIANDGYQFLETYLVSALIYWLLSIFFEL 219

Query: 384 FMNRLNAKIAL 394
               L  ++++
Sbjct: 220 AFALLEKRVSV 230


>gi|330954816|gb|EGH55076.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 229

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I + +   R SRH+  +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF  +  S + P     F    + ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQAVPPG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EIEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|319780744|ref|YP_004140220.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166632|gb|ADV10170.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 269

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 73/109 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   +AFI+E+ R+G+ AV +GQ+EAA ALGLT  +  RL++ PQA+R+I+PPL + 
Sbjct: 142 MALTIGYSAFISEVFRAGIQAVEKGQIEAAKALGLTRAQRFRLIVFPQAIRTILPPLGND 201

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           ++ L+K+SSL   +G AD+  +G      + +  E   I  +IYL L++
Sbjct: 202 FVALVKDSSLVSVLGVADITQMGKVYAAGSFRFFETYSITAYIYLILTV 250


>gi|308187256|ref|YP_003931387.1| ABC transport system permease protein [Pantoea vagans C9-1]
 gi|308057766|gb|ADO09938.1| Putative ABC transport system permease protein [Pantoea vagans
           C9-1]
          Length = 222

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLSR +  +    L  +Y+S F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSRFWPVRW---LARIYVSIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ +E +R  + ++ RGQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYASESLRGAIASIERGQWEAAASIGMTRWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA R+ +PPL + +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   NRL   +  ++ +
Sbjct: 194 LIYWVMATVLSALQNRLEQHVNRQDSE 220



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G ++   RLS    V W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGALFTLQLSIGGMFFGLLLGFILALMRLSRFWPVRWLARIYVSIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNN 173
           Y  +    + + PIP   I    G+ LN 
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNT 99


>gi|157415203|ref|YP_001482459.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157386167|gb|ABV52482.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307747845|gb|ADN91115.1| Putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni M1]
          Length = 261

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%)

Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276
           L ++STF   LI G P LV + L Y +  +   LG  N ++ G           I LSC+
Sbjct: 96  LRFLSTFYIELIRGTPLLVQVLLMYYIIANN--LGLDNRYVAG----------VIILSCF 143

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q+ NL+K
Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 203

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL   +   +L      I + T   +E  +I    YL L++ I++F   L  K
Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERK 258



 Score = 36.6 bits (83), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 41/82 (50%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F I      ++  ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + +
Sbjct: 39  CSFSISAYHFDFSVIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           +   Y+E+ R  P LV +  +Y
Sbjct: 99  LSTFYIELIRGTPLLVQVLLMY 120


>gi|329908118|ref|ZP_08274834.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546759|gb|EGF31696.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 260

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 102/187 (54%), Gaps = 18/187 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVL 251
           V+GIVL + A         K    LPL + + F I+   G P LV +   +        L
Sbjct: 70  VIGIVLGMLAA------LGKLSSFLPLRWAAGFYIWAIRGTPLLVQVLFVF--------L 115

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                + G  +S +F S  +AL+    A+ AE +RSG++AV +GQ EAA +LGL+  +  
Sbjct: 116 ALPALVPGLQLS-DFYSAVVALAFNAGAYNAEAIRSGILAVHKGQAEAARSLGLSPFQTF 174

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+ PQ+MR  +PPL + +++LLK+SSLA  +G  +L ++G  I + T Q I + +   
Sbjct: 175 RDVVFPQSMRIALPPLVNNFVSLLKDSSLAYVIGVVELSNIGNRIQSVTFQPIPVFVTVA 234

Query: 372 FIYLSLS 378
            IYL L+
Sbjct: 235 AIYLILT 241


>gi|224542318|ref|ZP_03682857.1| hypothetical protein CATMIT_01497 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524767|gb|EEF93872.1| hypothetical protein CATMIT_01497 [Catenibacterium mitsuokai DSM
           15897]
          Length = 229

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 27/213 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  +LGI+ +  A +LS+HF        + +  +  P+L    FL   +PT+V      +
Sbjct: 36  FGVILGIIGA--ALKLSKHFVLRAIGNVYVEIFRGTPMLLQIMFLYLAVPTVVQSITGQR 93

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              D  V G                  IA+S  + A+  E++RSG++ V +GQ EA   +
Sbjct: 94  FQADPYVCG-----------------LIAMSLNSGAYQVELIRSGILGVDKGQWEACETI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +  R V+LPQA + IIPPL S+++ L+K+SSL   +G  +L++    I   T   
Sbjct: 137 GLNYVQTMRYVILPQAFKRIIPPLISEFITLIKDSSLIFTIGAVELLATASVIGANTFNY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +     IYL +++ I+     +  ++A+ +
Sbjct: 197 LVPLTATGAIYLVMTLCISAIARYVEGRLAVSD 229



 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   +  LA   +    I+G +  A +LS + ++  I  VYVE+FR  P L+ I FL
Sbjct: 19  IFTGAKYSLLLAIGALFFGVILGIIGAALKLSKHFVLRAIGNVYVEIFRGTPMLLQIMFL 78

Query: 149 YKSVLSVL 156
           Y +V +V+
Sbjct: 79  YLAVPTVV 86


>gi|66048138|ref|YP_237979.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63258845|gb|AAY39941.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330900968|gb|EGH32387.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330939296|gb|EGH42691.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330970704|gb|EGH70770.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330980615|gb|EGH78718.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 229

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I + +   R SRH+  +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF  +  S + P     F    + ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQAVPPG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|282601295|ref|ZP_06257979.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Subdoligranulum variabile DSM 15176]
 gi|282569527|gb|EFB75062.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Subdoligranulum variabile DSM 15176]
          Length = 224

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 117/209 (55%), Gaps = 28/209 (13%)

Query: 192 FSFVLGIVLSLFATRLSRHFH------EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           F+ +LG++  L +   +R  +          + +P++ ++ F+ FG+P L+         
Sbjct: 29  FACILGLIFGLLSVVKNRACNIVSIIFVDAIRGVPMIVLAYFIYFGIPYLL--------- 79

Query: 246 FDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               +LG     GG T++  +  ++ +AL+C   A++AEI+R+G+ +V +GQMEAA +LG
Sbjct: 80  --NTILG----FGGVTLTALQAGTVCLALNC--GAYMAEIIRAGIESVDKGQMEAARSLG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +A   V+LPQA+R++IP + +Q++  LK++S+   +GF +LV+    ++  +  + 
Sbjct: 132 LPYWRAMVRVVLPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKNVVANSFMSF 191

Query: 365 EIILIWMFIYL----SLSIMIALFMNRLN 389
           ++  I   +YL     LS++      RLN
Sbjct: 192 QVWAIVAVMYLIVITILSVLAKQMERRLN 220


>gi|118469246|ref|YP_885991.1| polar amino acid ABC transporter inner membrane protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118170533|gb|ABK71429.1| ABC polar amino acid transporter, inner membrane subunit
           [Mycobacterium smegmatis str. MC2 155]
          Length = 263

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 98/177 (55%), Gaps = 7/177 (3%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG--GSTVSPEFMSLYIALSCYTAAFIAEI 284
           ++I G P LV + L Y        L QF+ +   G +V     +  I L    +A+IAEI
Sbjct: 64  WVIRGTPLLVQLVLIYT-GLAAAGLYQFHDVSLLGLSVKAALQAAIIGLMINESAYIAEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+GL +VP+GQ EAA +LG+   K  R +++PQA+R ++PP+ + +  L+K +S+   +
Sbjct: 123 IRAGLDSVPKGQFEAAASLGMKPAKVMRWIIVPQALRVMVPPMGNSFNGLMKTTSVLSVI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM----NRLNAKIALKEK 397
           G +++  V  +I + T    EI ++    YL+L+ +         NRL  ++ ++++
Sbjct: 183 GVSEMFLVTQSISSATFHTFEIFIVAAIYYLALTTIWTFIQAGIENRLARQLGIEQR 239


>gi|71734098|ref|YP_274659.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298486963|ref|ZP_07005016.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71554651|gb|AAZ33862.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298158525|gb|EFH99592.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 233

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   +  +  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213


>gi|148240913|ref|YP_001220414.1| inner membrane amino-acid ABC transporter permease protein
           [Bradyrhizobium sp. BTAi1]
 gi|146411289|gb|ABQ39742.1| Inner membrane amino-acid ABC transporter permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 360

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 3/139 (2%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+  + +  +F+   +AL+ + AA++AE++R GL A+PRGQ EAA ALGL   +    V+
Sbjct: 217 FLPEALLPDKFVRALVALTIFAAAYLAEVIRGGLQAIPRGQYEAAAALGLPFWRTQYRVI 276

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMF 372
           LPQA+R +IP L +  + ++KN+SL + VG  DL+S G   +        A E  L    
Sbjct: 277 LPQAIRVVIPALANTIIVMIKNTSLVLVVGLFDLISSGKAALADPAWPSPAAETFLFIGG 336

Query: 373 IYLSLSIMIALFMNRLNAK 391
           I+ +LS   A F + L  +
Sbjct: 337 IFFALSFSFARFADFLERR 355


>gi|289646274|ref|ZP_06477617.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 233

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   +  +  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213


>gi|188534471|ref|YP_001908268.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis
           Et1/99]
 gi|188029513|emb|CAO97390.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis
           Et1/99]
          Length = 225

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 78/127 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A S + AA+ +EI+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R+++
Sbjct: 96  RLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALALGMTRWQSMQLIILPQAFRAMV 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +  AD      TI    G  IE++L    +Y  +S+  +L 
Sbjct: 156 PLLLTQGIVLFQDTSLVYVLSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLL 215

Query: 385 MNRLNAK 391
           ++ L  K
Sbjct: 216 VSYLKKK 222



 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 40/65 (61%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  + F+ ++   I GT++   RLS+ K ++W  ++YV +FR++P ++V+ + Y  
Sbjct: 19  GMVITLQITFTAIVFGIIWGTMLAVMRLSSFKPISWFAKIYVNLFRSVPLVMVLLWFYLV 78

Query: 152 VLSVL 156
           V S L
Sbjct: 79  VPSFL 83


>gi|170696122|ref|ZP_02887257.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170138937|gb|EDT07130.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 246

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 12/177 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--------PLLYISTFLIFGL 232
           +T+  +A + V + +LG  L++   R+++H    T   L        PLL    F  FG 
Sbjct: 22  ITLILSACVSVCATLLGFGLAM--ARIAQHRAVATAAKLYVLVFRNSPLLVQLLFWYFGA 79

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            TL+  A  +    + P +           S E  + ++ L+CY+ AFIAE  R+G+  V
Sbjct: 80  ATLLPSA--WMTWLNTPHVLSAGPFALHWPSFELFAGWLGLTCYSTAFIAEEFRAGIRGV 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
              Q +A+ ALG+T     R V+LPQA+R   PPL  QY+N++KNSSL +A+G A+L
Sbjct: 138 GIAQYQASAALGMTRYATLRHVVLPQAVRIATPPLAGQYMNIVKNSSLTMAIGVAEL 194



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D  Y   +  GF+ T  L+    + AT++G  +   R++ ++ VA   ++YV VFRN P 
Sbjct: 9   DPRYLGWLAHGFLITLILSACVSVCATLLGFGLAMARIAQHRAVATAAKLYVLVFRNSPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           LV + F Y    ++LP
Sbjct: 69  LVQLLFWYFGAATLLP 84


>gi|228995974|ref|ZP_04155630.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock3-17]
 gi|229003591|ref|ZP_04161407.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock1-4]
 gi|228757633|gb|EEM06862.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock1-4]
 gi|228763747|gb|EEM12638.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock3-17]
          Length = 214

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 69/94 (73%), Gaps = 3/94 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL++ +    ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLSYIQTLWHIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++LLK++SLAV +   +L+     IIN  GQ +
Sbjct: 153 FISLLKDTSLAVVISLPELMH-NAQIIN--GQNV 183



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT D  +   +L G + T  +A   ++ + IIG++VG  R +   +V+ +    VE+ RN
Sbjct: 7   YTGD--HVLFLLKGLLVTLEIAVVAILLSFIIGSIVGTLRYAKIPVVSQLLAFIVEIIRN 64

Query: 139 IPPLVVIFFLY 149
           +P L++IFF Y
Sbjct: 65  LPLLLIIFFTY 75


>gi|330811361|ref|YP_004355823.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379469|gb|AEA70819.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 223

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 23/220 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T+   A   V   +LG +L+L     ++      G      +++PLL + T+    +P 
Sbjct: 21  MTLKLMALGVVGGIILGTILALMRLSHNKLVSNLAGAYVNYFRSIPLLLVITWFYLAVP- 79

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                L++    D P+               F S  +A   + AA+  EIVR+G+ ++P+
Sbjct: 80  ---FVLRWITGEDTPI-------------GAFGSCIVAFMMFEAAYFCEIVRAGVQSIPK 123

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   
Sbjct: 124 GQMGAAQALGMNYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 183

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +  G++ E ++I   +Y ++S   +  + RL  + A+
Sbjct: 184 ASGDIIGRSNEFLIIAGLVYFTVSFAASQLVKRLQKRFAV 223



 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   I+GT++   RLS NKLV+ +   YV  FR+IP L+VI + Y +
Sbjct: 18  GMVMTLKLMALGVVGGIILGTILALMRLSHNKLVSNLAGAYVNYFRSIPLLLVITWFYLA 77

Query: 152 VLSVL 156
           V  VL
Sbjct: 78  VPFVL 82


>gi|57237768|ref|YP_179016.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni RM1221]
 gi|57166572|gb|AAW35351.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni RM1221]
 gi|315058379|gb|ADT72708.1| Putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 261

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%)

Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276
           L ++STF   LI G P LV + L Y +  +   LG  N ++ G           I LSC+
Sbjct: 96  LRFLSTFYIELIRGTPLLVQVLLIYYIIANN--LGLDNRYVAG----------VIILSCF 143

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q+ NL+K
Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 203

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL   +   +L      I + T   +E  +I    YL L++ I++F   L  K
Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERK 258



 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 42/82 (51%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F +      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + +
Sbjct: 39  CSFSVSAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           +   Y+E+ R  P LV +  +Y
Sbjct: 99  LSTFYIELIRGTPLLVQVLLIY 120


>gi|153951698|ref|YP_001398010.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939144|gb|ABS43885.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 250

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 72/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG++AVPRGQ EA+ + G T+ +  R +++PQ +R I+PP+T+Q
Sbjct: 122 LGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTNQ 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KN+S+ + VG A+L+    +     G      +    +Y  +   +A F      
Sbjct: 182 MVNLIKNTSVLLIVGGAELMHSADSYAADYGNYASAYIFAAVLYFIICYPLAYFAKAYEN 241

Query: 391 KI 392
           K+
Sbjct: 242 KL 243



 Score = 43.5 bits (101), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A + GF+ T  ++   +  ATI GT+ G    S  K++    R+YVE+F+N+P ++ IFF
Sbjct: 43  AFINGFIYTLEVSILALFIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF 102

Query: 148 LY 149
           L+
Sbjct: 103 LF 104


>gi|311107044|ref|YP_003979897.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 13 [Achromobacter
           xylosoxidans A8]
 gi|310761733|gb|ADP17182.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 13
           [Achromobacter xylosoxidans A8]
          Length = 251

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 78/127 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +A+  Y +A I E +R+G+ A+P+GQ  A +ALGLT  +  R VLLP A+R+++P
Sbjct: 108 FYTAALAIGMYMSARIGEQLRAGIEALPQGQRNAGLALGLTLPQLYRHVLLPNALRTVLP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +TS  LN +KN+S+A+ +G A+L +    +   + Q  E  L     YL+L++++ + M
Sbjct: 168 TMTSDCLNTIKNTSVALTIGLAELTAQAHAMQEFSFQVFEAFLTATMAYLALNLIVIVVM 227

Query: 386 NRLNAKI 392
             L  K+
Sbjct: 228 RALEYKL 234



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 12/73 (16%)

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP---------IPD---H 161
           VG  R   ++ V     VYVEVFRNIP +V +F  Y  +  +LP         +PD   +
Sbjct: 50  VGVARTLPSRGVRAAAAVYVEVFRNIPLIVQMFLWYFVLPELLPTAAGDWIKQLPDASFY 109

Query: 162 SIVLPFGMFLNNR 174
           +  L  GM+++ R
Sbjct: 110 TAALAIGMYMSAR 122


>gi|257469870|ref|ZP_05633962.1| amino acid ABC transporter permease [Fusobacterium ulcerans ATCC
           49185]
 gi|317064099|ref|ZP_07928584.1| amino acid transport system permease [Fusobacterium ulcerans ATCC
           49185]
 gi|313689775|gb|EFS26610.1| amino acid transport system permease [Fusobacterium ulcerans ATCC
           49185]
          Length = 236

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 85/147 (57%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L    F+G    +P  +   ++    + A++AEI+R+G+  + +GQMEAA ALG+ +  
Sbjct: 90  ILANLIFVGALRDTPILVIAGLSFGINSGAYVAEIIRAGIEGLDKGQMEAARALGMPYGI 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A + +++PQA++ I+P L S+++ LLK +S+   +G  DL+     I +QT + +E +L 
Sbjct: 150 AMKEIIIPQAIKKILPALVSEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLA 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL L+ +   FM  +   + + +
Sbjct: 210 VGLIYLILTAVFTKFMRGIEKGLKVSD 236


>gi|157693149|ref|YP_001487611.1| glutamine ABC transporter membrane protein [Bacillus pumilus
           SAFR-032]
 gi|157681907|gb|ABV63051.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 216

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 98/167 (58%), Gaps = 14/167 (8%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I  LP L++I   Y   F  P +G    I  S ++        AL+ + +A ++EI+RSG
Sbjct: 62  IRNLPLLLIIFFTY---FALPEIGIKLSITASAIA--------ALTVFESAMLSEIIRSG 110

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++ +GQ+EAA + G T+ +  +++++PQA+R ++PP+ SQ+++LLK++SLAV +   +
Sbjct: 111 LKSIDKGQIEAARSSGFTYIQTLKMIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPE 170

Query: 349 LVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+     I+N   Q+  + I L+   +Y  ++  ++L   RL  + A
Sbjct: 171 LLH-HAQILNGQSQSYLLPIFLLAAMMYFVVNFSLSLLARRLEYRQA 216



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  +AF  +I + +IG ++G  R +   +++ I  V VE  RN+P L++IFF 
Sbjct: 15  LLEGFAVTLKVAFISIILSFLIGLVIGTLRFAQIPILSKILAVVVETIRNLPLLLIIFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|89897021|ref|YP_520508.1| hypothetical protein DSY4275 [Desulfitobacterium hafniense Y51]
 gi|219667106|ref|YP_002457541.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|89336469|dbj|BAE86064.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219537366|gb|ACL19105.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 215

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 71/106 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++ +T+A IAE+VR GL ++ +GQ EAA + GL++ +  R ++LPQA+R +IPPL SQ
Sbjct: 86  LAMTVFTSAIIAEVVRGGLNSIDKGQWEAAKSQGLSYVQILRYIILPQALRKMIPPLVSQ 145

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           ++ ++K++S   AVG  +L   G  I+ Q G   ++  ++  I L+
Sbjct: 146 FITVVKDTSYVWAVGIEELTGKGLIIMGQFGSTPQVFTLFGMIALT 191



 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 35/54 (64%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           G + T ++A   ++ + ++GT++G  R S N ++A +  +Y+EV RNIP L+ I
Sbjct: 16  GLMTTLYIAGMTIVLSFVVGTILGIARYSKNPILAPLAAIYIEVVRNIPLLLFI 69


>gi|330427593|gb|AEC18927.1| polar amino acid ABC transporter, inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 217

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 18/206 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FV   ++G++++L     SR    K  +AL + +I  F   G P L+ + L     F  P
Sbjct: 27  FVGGGIVGLIIAL-----SRTSESKLAQALSMGFIQLFR--GTPLLLQLFLV---FFGAP 76

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G         ++P F +  +AL+  + AF+ EI R  + A+P GQ EAA ALGL +R 
Sbjct: 77  VIGL-------DINPWFAAA-VALTLNSGAFLGEIWRGCIQAIPSGQWEAAEALGLNYRH 128

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA++  +PP     + ++K +SLA  +GF +L   G  I N T Q + +  +
Sbjct: 129 KMRDVVLPQALKIAVPPTVGYLVQIVKGTSLAAIIGFTELTRAGQIINNATFQPMMVFTV 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
              IY  L   +++  + +  ++AL 
Sbjct: 189 VAIIYFFLCWPLSMLASYMERRLALS 214


>gi|312869289|ref|ZP_07729456.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095163|gb|EFQ53440.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 502

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 105/203 (51%), Gaps = 22/203 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +  F++G++ +L     ++  H      + + YI    I G P LV I   Y        
Sbjct: 316 IVGFLIGVLFALMRLSDNKLLH-----GIAICYIE--FIRGTPMLVQIMFVY-------- 360

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G+ +   P  ++  IA++  + A++AEI+RSG+ ++P GQ EAA +LG+T +
Sbjct: 361 -----FGIGAIIQSMPALVAGIIAVAINSGAYVAEIIRSGIQSLPLGQTEAARSLGMTKQ 415

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R +++PQA+++I P L ++++ LLK+SSL   +G  +L+     +   T + +  + 
Sbjct: 416 QTFRYIIMPQALKNIWPALGNEFITLLKDSSLVSTIGVTELMYQTQLVQADTYKGVLPLF 475

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           I M IY  L+  +   +N    K
Sbjct: 476 ITMMIYFFLTFTLTRILNHFEKK 498



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 33/67 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           +SY T  + G   T  +    +I   +IG L    RLS NKL+  I   Y+E  R  P L
Sbjct: 294 ASYWTFFVKGVKYTLLITVLAVIVGFLIGVLFALMRLSDNKLLHGIAICYIEFIRGTPML 353

Query: 143 VVIFFLY 149
           V I F+Y
Sbjct: 354 VQIMFVY 360


>gi|325955845|ref|YP_004286455.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus acidophilus 30SC]
 gi|325332410|gb|ADZ06318.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus acidophilus 30SC]
 gi|327182680|gb|AEA31127.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1118]
          Length = 494

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I VFS ++GIVL +     RLSR+   K    + + YI    I G P +V I   Y    
Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSRN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 352 ---------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484



 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            VN   N +EK NL +   +L   A +   +      + + YA   + G   T  +    
Sbjct: 249 AVNKTINRVEKKNL-INKEYLPAAAKYM--KTAQKTNTMAKYAPYFVKGVGYTIVITVFS 305

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 306 VLIGIVLGMLLALMRLSRNKLLHWIAVCYIEFIRGTPQMVQILFVY 351


>gi|47569972|ref|ZP_00240636.1| amino acid ABC transporter, permease protein VC0009 [Bacillus
           cereus G9241]
 gi|47553370|gb|EAL11757.1| amino acid ABC transporter, permease protein VC0009 [Bacillus
           cereus G9241]
          Length = 222

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 21/222 (9%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           SFP L      T+       + SFV+GI L++     ++  +     ++  +YIS F   
Sbjct: 11  SFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLY-----SIARVYISFFR-- 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV +   + L+F  P           TV     +  I LS   AA+++EI+R    
Sbjct: 64  GTPLLVQL---FVLYFGLP-----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+ A+G A+++
Sbjct: 116 AVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEIL 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 176 AQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217


>gi|186683156|ref|YP_001866352.1| polar amino acid ABC transporter inner membrane subunit [Nostoc
           punctiforme PCC 73102]
 gi|186465608|gb|ACC81409.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc
           punctiforme PCC 73102]
          Length = 501

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 88/159 (55%), Gaps = 5/159 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I   + ++F  P + Q   IG +       +  IALS   AA+ AE+VR+G+ 
Sbjct: 338 GTPLLVQI---FMIYFGLPAISQE--IGFTFTFDRLTAGIIALSLNNAAYTAEVVRAGIQ 392

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQ EAA +LGL+  +    V+ PQA R +IPPL + +++LLK++SL   +G  +L+
Sbjct: 393 SIETGQAEAAQSLGLSSIQTMSYVIFPQAFRRMIPPLGNDFISLLKDTSLVSVIGLEELL 452

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             G  I+    +A EI      +YL L+++ +   + L 
Sbjct: 453 RKGQLIVADNYRAFEIYAGVAVVYLCLTLLFSQAFSHLE 491



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++   I G+L+G  RLS    V W+ R YV+ FR  P LV IF +
Sbjct: 289 LLQGALVTLQLTIISVVFGLIGGSLIGIVRLSRITPVRWLARAYVDFFRGTPLLVQIFMI 348

Query: 149 Y 149
           Y
Sbjct: 349 Y 349


>gi|325124980|gb|ADY84310.1| Putative glutamine ABC transporter [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 527

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNE 443

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N +  
Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503

Query: 391 KIALKE 396
            I   E
Sbjct: 504 HIEGPE 509


>gi|71903839|ref|YP_280642.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|71802934|gb|AAX72287.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS6180]
          Length = 228

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 103/187 (55%), Gaps = 12/187 (6%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSL 269
           K     PL ++    ++   G P +V I + +  +HF+         IG   +  +F  L
Sbjct: 42  KRSHVKPLTWVVNLYVWIFRGTPMVVQIMIAFAWMHFNN-----MPTIGFGVLDLDFSRL 96

Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I +S  + A+I+EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P 
Sbjct: 97  LPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPA 156

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ ++K+S+    +G  +L +   +++  T   I  +L+  F YL ++ ++A  + 
Sbjct: 157 LGNEFITIIKDSAFLQTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLA 216

Query: 387 RLNAKIA 393
            L   +A
Sbjct: 217 VLERHMA 223


>gi|84387890|ref|ZP_00990904.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84377236|gb|EAP94105.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 265

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 17/207 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            I + S V  +++ L  T L R+ +   G+ L   Y+   LI   P LV I   Y L+F 
Sbjct: 69  NISLISLVATLIIGL-TTALLRNSNSVVGRTLATSYVE--LIRNTPLLVQI---YLLYFV 122

Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PVLG             F +  +AL+ +  A+ AEI R+GL  + RGQ EAA +LGL+
Sbjct: 123 FGPVLGL----------DRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQSLGLS 172

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                  V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T    EI
Sbjct: 173 KTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETAMPFEI 232

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 IYL+L++ ++     L  K+ 
Sbjct: 233 WFSVAIIYLALTLSLSAVAAWLEHKLG 259


>gi|296129248|ref|YP_003636498.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
 gi|296021063|gb|ADG74299.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
          Length = 273

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   +AA+I+E VR+G+ AVPRGQ+EAA +LG++H +    V+LPQA R+++PPLT++
Sbjct: 144 IALGSVSAAYISETVRAGIQAVPRGQVEAARSLGMSHTRTMIEVVLPQAFRTVMPPLTNE 203

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            L L K++SL   +G    F +L  VG   ++     +  + +    YL ++I +     
Sbjct: 204 VLLLTKDTSLLFVLGQTPEFFELTKVGRDALSTASGGLTGLFVVGACYLVITIPLGFLAR 263

Query: 387 RLNAK 391
           RL  +
Sbjct: 264 RLERR 268


>gi|330807008|ref|YP_004351470.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375116|gb|AEA66466.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 229

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 17/206 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I L +   R SR ++ +   A P  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLLLAIPLGI--ARSSRLWYVR---AFPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +  S + P     F      ++ +TAA+IAEI+R  + A+PRG
Sbjct: 71  LVYY------GLAQFDAVRSSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPRG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EIEAARALGMSRPKALLYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMI 381
           II +T   +EI       YL +S ++
Sbjct: 185 IIARTYMPVEIFFAAGMFYLLMSFVL 210


>gi|310639893|ref|YP_003944651.1| glutamine abc transporter permease protein [Paenibacillus polymyxa
           SC2]
 gi|309244843|gb|ADO54410.1| Glutamine ABC transporter permease protein [Paenibacillus polymyxa
           SC2]
          Length = 219

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 33/208 (15%)

Query: 193 SFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SF+LG ++++F     +        + +  + +PLL +  F   GLPTL +         
Sbjct: 34  SFILGAIIAIFRIAPFKWLNWIGTVYVEVIRNIPLLIVVLFFYLGLPTLGI--------- 84

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+ G   F+ G+          + L+ YTA+FIAE +R+G+ +VP+GQ EA+ + GL 
Sbjct: 85  --PLDG---FVSGT----------LGLTVYTASFIAEAIRAGIQSVPKGQFEASRSSGLN 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    ++LPQA++ ++P + +Q++NL+KNSS+   V   DL+     I + T   I +
Sbjct: 130 YNQTMISIILPQAIKIVLPAIGNQFINLVKNSSVLAIVAGLDLMYYSDLINSDTFLPITV 189

Query: 367 ILIWMFIYLSLSI---MIALFMNRLNAK 391
             I   +YL L++    + L+M R  +K
Sbjct: 190 YAITALLYLVLTVPLSFLVLYMERRLSK 217



 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G ++T   +   +I + I+G ++   R++  K + WI  VYVEV RNIP L+V+ F Y  
Sbjct: 19  GLLHTVQASVIALIGSFILGAIIAIFRIAPFKWLNWIGTVYVEVIRNIPLLIVVLFFYLG 78

Query: 152 VLSVLPIP 159
            L  L IP
Sbjct: 79  -LPTLGIP 85


>gi|306825587|ref|ZP_07458926.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431948|gb|EFM34925.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 227

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 103/183 (56%), Gaps = 7/183 (3%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           PL++ +   ++   G P +V I + + L H + P + Q   +G        +   + +S 
Sbjct: 48  PLVWFANVYVWIFRGTPMMVQIMIAFALMHINAPTI-QVGILGVDL--SRLIPGILIISM 104

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A+++E VR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++
Sbjct: 105 NSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITII 164

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+SSL  A+G  +L +   T+   T   +  +L   F YL ++ ++ + +      I   
Sbjct: 165 KDSSLLSAIGVMELWNGATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFEKHIGQG 224

Query: 396 EKK 398
           +KK
Sbjct: 225 DKK 227


>gi|254512946|ref|ZP_05125012.1| ABC-type glutamine transport system, permease component
           [Rhodobacteraceae bacterium KLH11]
 gi|221532945|gb|EEE35940.1| ABC-type glutamine transport system, permease component
           [Rhodobacteraceae bacterium KLH11]
          Length = 252

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V S  +G++++L       + RL    + +  +A+PLL +  ++ +GLP +         
Sbjct: 57  VLSIAIGLLVALPGLSEKRSWRLVNRVYVEFIRAIPLLPMLFWVFYGLPIV--------- 107

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  +G +     F    I L+   +AF AEI R+G+ ++ RGQ EAA  +G
Sbjct: 108 ---------FQSMGLNIPIDPFWGAIITLAISDSAFTAEIYRAGIQSIARGQREAAQTIG 158

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  R V+LPQA+R I+PPL +Q++ ++K S+ A  +G  +L      ++    + +
Sbjct: 159 LNYIQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPL 218

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           EI  + +F YL L ++I+  +  L  ++   E+
Sbjct: 219 EIYTLLIFEYLILVLIISAGVRWLERRMGADER 251


>gi|293365081|ref|ZP_06611798.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307702210|ref|ZP_07639170.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|315612852|ref|ZP_07887763.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis ATCC 49296]
 gi|322374624|ref|ZP_08049138.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|331266721|ref|YP_004326351.1| ABC transporter membrane-spanning permease-polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
 gi|291316531|gb|EFE56967.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307624223|gb|EFO03200.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|315314962|gb|EFU63003.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis ATCC 49296]
 gi|321280124|gb|EFX57163.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|326683393|emb|CBZ01011.1| ABC transporter membrane-spanning permease-polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
          Length = 227

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 103/183 (56%), Gaps = 7/183 (3%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           PL++ +   ++   G P +V I + + L H + P + Q   +G        +   + +S 
Sbjct: 48  PLVWFANVYVWIFRGTPMMVQIMIAFALMHINAPTI-QVGILGVDL--SRLIPGILIISM 104

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A+++E VR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++
Sbjct: 105 NSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITII 164

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+SSL  A+G  +L +   T+   T   +  +L   F YL ++ ++ + +      I   
Sbjct: 165 KDSSLLSAIGVMELWNGATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFEKHIGQG 224

Query: 396 EKK 398
           +KK
Sbjct: 225 DKK 227


>gi|152965463|ref|YP_001361247.1| polar amino acid ABC transporter inner membrane protein
           [Kineococcus radiotolerans SRS30216]
 gi|151359980|gb|ABS02983.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
          Length = 282

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 84/140 (60%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F G     P +    + L+ Y  AF+AEI+R+G+ A+P+GQ EA +A+GLT  +    + 
Sbjct: 122 FYGSGGDVPLYWCGVLGLTVYNGAFLAEILRAGVEALPKGQREAGLAVGLTESQVLWTIQ 181

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+RS++P L SQ + +LK+S+L   +G+++L+  G  + +Q    I  +L+   +Y+
Sbjct: 182 LPQAVRSMLPSLVSQIVVILKDSALIYIIGYSELLRWGTQLGSQYFNLIPAMLVIAVVYV 241

Query: 376 SLSIMIALFMNRLNAKIALK 395
             +++IA     +  +++ K
Sbjct: 242 GTNMVIAAIAKVVERRMSTK 261


>gi|118586385|ref|ZP_01543834.1| glutamine ABC transporter, integral membrane protein [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433172|gb|EAV39889.1| glutamine ABC transporter, integral membrane protein [Oenococcus
           oeni ATCC BAA-1163]
          Length = 222

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 99/168 (58%), Gaps = 16/168 (9%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I  LP L++I   + ++F  PV+G +         P F +  IA++ + +  +AEI+R 
Sbjct: 66  VIRNLPLLLII---FFVYFALPVIGIY--------LPVFWATVIAMTVFESTMLAEIIRG 114

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL+A+P GQ E A ++G+T+++A   ++LPQA++ +IPP+ SQ ++L+K++SLAV +  A
Sbjct: 115 GLLAIPIGQTEGARSVGMTNQQALLNIILPQAIKKMIPPIISQLISLVKDTSLAVGIVLA 174

Query: 348 DLVSVGGTIINQTGQA-----IEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++   G  I  Q         I + +++  +   LS++   F +R+ A
Sbjct: 175 EMTFRGQIIYAQNSNYTIPVFIALAIMYFILNYGLSLIARWFDHRMAA 222


>gi|222102871|ref|YP_002539910.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739472|gb|ACM40205.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 290

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 10/225 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   LT+   +   VF    G ++++ AT           KAL + ++  F   G+P +
Sbjct: 63  LSGVVLTLQLTSGAMVFGIAFGCIVAVMATS-----QNIVLKALAIAFVWWFR--GVPLI 115

Query: 236 VLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           V I   + +    P   +G ++    + V+P     ++AL  + AA ++EI+R GL AV 
Sbjct: 116 VQIFFWFNIALFIPEVGIGSYSISINALVTPALAG-FLALGLHEAANMSEIIRGGLTAVD 174

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA +LGL   +  R V+LPQA+R I+PP  +Q + +LK S++   +G  DL++  
Sbjct: 175 RGQREAASSLGLRPLQTLRTVVLPQAVRLIVPPTGNQAIGMLKASAIVSVIGMQDLLTQA 234

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I  +    IE++ +    YL ++ + ++    L   +A K + 
Sbjct: 235 QAIYARNFLVIELLCVASLWYLLITTLASIGQYFLEKHLAPKGRN 279


>gi|86360984|ref|YP_472871.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CFN
           42]
 gi|86285086|gb|ABC94144.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CFN
           42]
          Length = 513

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 112/213 (52%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   ++G+VL++     SR         LP   I T +  GLP +V I           +
Sbjct: 41  VLGVIIGMVLAVMGISQSRWLR------LPA-RIYTDIFRGLPAIVTIL----------I 83

Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L I ALS    A+I EI RSG+ +V RGQMEA  AL +++ 
Sbjct: 84  IGQGFARIGRDIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364
           +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      TG   
Sbjct: 144 QGMRLIVIPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++L  +F YL++++ +  F+N ++A++ L ++
Sbjct: 204 PLLLAGVF-YLAITVPLTHFVNHIDARLRLGKQ 235


>gi|116513356|ref|YP_812262.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116092671|gb|ABJ57824.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 527

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNE 443

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N +  
Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503

Query: 391 KIALKE 396
            I   E
Sbjct: 504 HIEGPE 509


>gi|227327759|ref|ZP_03831783.1| amino acid ABC transporter [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 254

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 78/133 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A++    A+++EI R+G+ ++  GQMEA+ +LG+++ +  R V+LPQA R ++P
Sbjct: 122 FLSCVVAITLNAGAYVSEIFRAGIQSIDHGQMEASRSLGMSYGRTMRKVILPQAFRRMLP 181

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L +
Sbjct: 182 PLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISIVYWVITFLLSLLV 241

Query: 386 NRLNAKIALKEKK 398
             +  +    + +
Sbjct: 242 RHMEMRFGKSDSR 254


>gi|104773375|ref|YP_618355.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422456|emb|CAI97009.1| Amino acid ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 527

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 384 IIVSINTGAYLAEVIRGGIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNE 443

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N +  
Sbjct: 444 FIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEK 503

Query: 391 KIALKE 396
            I   E
Sbjct: 504 HIEGPE 509


>gi|320450573|ref|YP_004202669.1| amino acid ABC transporter permease [Thermus scotoductus SA-01]
 gi|320150742|gb|ADW22120.1| amino acid ABC transporter, permease protein [Thermus scotoductus
           SA-01]
          Length = 258

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 16/222 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIF---GLPTL 235
           L  +   K+ + S + G+V+ +FA   RLSR    +    LP    ++F I+   G P L
Sbjct: 48  LGAEITLKLTLISSLAGLVIGVFAGMFRLSRRLWVR----LP----ASFYIWVTRGTPLL 99

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I   Y                   V   + + +IALS    A+ AE+VR+G+ A+P+G
Sbjct: 100 VQILFAYNALPLLLQPLWPE---AQQVLTPYWAAFIALSFNVGAYNAEVVRAGIQAIPKG 156

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL+     R V+LPQA+R ++PPL +  + LLK+SSLA  +   +L   G  
Sbjct: 157 QWEAAWSLGLSPADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVIALTELALSGQR 216

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II+ T + +E+ L    IYL L+ ++  F N L  ++ +  +
Sbjct: 217 IISATFRPVEVYLAVAAIYLLLTTVLTFFTNLLERRLQVAGR 258


>gi|253700904|ref|YP_003022093.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           sp. M21]
 gi|251775754|gb|ACT18335.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M21]
          Length = 261

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 19/201 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + +L IVL LF T L R    +       LY+   +I G+P LV      Q+ +    LG
Sbjct: 73  AILLAIVLGLF-TGLGRISKNRFINGTASLYVE--IIRGIPLLV------QIFYIYYALG 123

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F  +      P  +S  IA++    A++ E+VR+G+ ++ +GQ EAA++LG+  R+   
Sbjct: 124 SFVQV------PPILSAIIAMAVCYGAYMGEVVRAGIESIHKGQREAALSLGMNGRQTMI 177

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IIL 368
            V+LPQA++ I+PP+ ++++ LLK+SSL   +  ADL+  G    +++    E    I L
Sbjct: 178 HVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADLLRRGREFASESFTYFETYTVIAL 237

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
           I++ I L  S +I +   R++
Sbjct: 238 IYLIITLFFSKIIGVMEERVS 258



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 40/68 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++ A ++G   G GR+S N+ +     +YVE+ R IP LV IF++Y +
Sbjct: 62  GILVTFQVTLGAILLAIVLGLFTGLGRISKNRFINGTASLYVEIIRGIPLLVQIFYIYYA 121

Query: 152 VLSVLPIP 159
           + S + +P
Sbjct: 122 LGSFVQVP 129


>gi|83950534|ref|ZP_00959267.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83838433|gb|EAP77729.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 238

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 74/127 (58%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +PEF++  I L  YTA+ +AE VR+G+ AV +G + A+ A G +  +  R VLLP + R 
Sbjct: 100 NPEFVTAVIGLGLYTASRVAEQVRAGINAVGKGLVAASYANGFSTAQTYRYVLLPISFRL 159

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PP+TS++L + KNSSLA+ +G  +L +    I   T Q  E       IY+ +++M  
Sbjct: 160 IVPPMTSEFLTIFKNSSLALTIGLLELTAQSQQIAEYTFQGFEAYTAATIIYVVIALMAT 219

Query: 383 LFMNRLN 389
           +    L 
Sbjct: 220 VIAQMLE 226



 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y + ++ G   TF +A S  + A ++G L+G GR   N+ +A++C  YVE+FRN+P 
Sbjct: 12  EEQYLSWLISGVGWTFSVALSAWVLALLVGVLIGVGRTLPNRPIAFLCTTYVEIFRNVPL 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  V  ++P
Sbjct: 72  LVQLFLWYFVVPEIVP 87


>gi|310639892|ref|YP_003944650.1| glutamine abc transporter permease protein [Paenibacillus polymyxa
           SC2]
 gi|309244842|gb|ADO54409.1| Glutamine ABC transporter permease protein [Paenibacillus polymyxa
           SC2]
          Length = 216

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 39/222 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFA-TRLS-----RHFHEKTGKALPLLYISTFLIFGLPT 234
           LT++      +FSF LGIV  +   TR+        F     + LPLL I  F+   LP+
Sbjct: 21  LTLEVAIYSIIFSFALGIVFGILRYTRIPVLSQVAAFIIDLIRNLPLLLIIFFIGMVLPS 80

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           + L I+LK+                         +    LS +  A IAEIVRSGL +V 
Sbjct: 81  IGLSISLKW-------------------------AAITGLSIFEGAMIAEIVRSGLNSVH 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-- 351
           +GQ+EAA + GL++ +    ++LPQA+R ++PP+ SQ+++L K++SLAV +   +L    
Sbjct: 116 KGQLEAARSSGLSYSQTLWHIILPQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHNI 175

Query: 352 --VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             VGG   NQ+   I  +L   F+Y +++  ++L   RL  +
Sbjct: 176 QIVGGQ--NQSF-VIPALLFAAFLYFAVNYSMSLIARRLEVR 214


>gi|163856808|ref|YP_001631106.1| polar amino acid transport system permease protein [Bordetella
           petrii DSM 12804]
 gi|163260536|emb|CAP42838.1| polar amino acid transport system permease protein [Bordetella
           petrii]
          Length = 222

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 80/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L  Y+ A+++EIVR  + +V RGQ EAA +LG++  +A R+++LPQA+  +
Sbjct: 87  PAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLGMSSGQAMRIIILPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E  L+   IYL L+     
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLETYLVIALIYLVLTTATTT 206

Query: 384 FMNRLNAKI 392
            + R+  ++
Sbjct: 207 VLRRIEHRL 215


>gi|91226241|ref|ZP_01261081.1| putative amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 12G01]
 gi|91189252|gb|EAS75531.1| putative amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 12G01]
          Length = 246

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 65/102 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL++ +  RLV+LPQA R I+
Sbjct: 114 HFWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMRLVILPQAFRQIL 173

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           PPL +Q++ +LK SSL   +G +DL      ++      +EI
Sbjct: 174 PPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEI 215


>gi|91786938|ref|YP_547890.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696163|gb|ABE42992.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 222

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 13/207 (6%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             +I   S +LG V+ L       +   +    L   Y++  +I G P LV +   + L 
Sbjct: 22  TVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVA--IIRGTPLLVQL---FILF 76

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P   QF  +      P F+   I L  Y+ A+++E+VR  + ++ RGQMEAA ++G+
Sbjct: 77  FGLP---QFGIL-----LPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQMEAARSIGM 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +   A R V+LPQA+  +IPPL ++++ L+KNS+L   +   D++  G  II+ + +++E
Sbjct: 129 SSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRSLE 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           + L    +Y  L+    L + R+  ++
Sbjct: 189 VYLAIAVVYFVLTGATTLVLRRMELRL 215



 Score = 36.6 bits (83), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIFF 147
           +L G + T  +  + ++   ++G LVG GRL+  + + + +C  YV + R  P LV +F 
Sbjct: 15  LLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAIIRGTPLLVQLFI 74

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           L+        +P   I+LP
Sbjct: 75  LF------FGLPQFGILLP 87


>gi|301301393|ref|ZP_07207533.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300850998|gb|EFK78742.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 499

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 22/201 (10%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FVLGI+L+L      R  H K    L + YI    I G P +V +   Y           
Sbjct: 316 FVLGIILALM-----RLGHNKLLHGLAVAYIE--FIRGTPLMVQVMFVY----------- 357

Query: 254 FNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F  G+ +   P   +  IA+S  ++A++AE++RSG+ ++  GQ EAA +LG++ ++  
Sbjct: 358 --FGIGAVIQSLPALAAGIIAVSLNSSAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 415

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           + V++PQA+++I P L ++++ L+K SS+   +G  DL+     + + T + +  + I M
Sbjct: 416 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 475

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            IY  L+  ++  +N    K+
Sbjct: 476 VIYFVLTFTLSKGLNYFEGKM 496


>gi|296314052|ref|ZP_06863993.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria polysaccharea ATCC 43768]
 gi|296839302|gb|EFH23240.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria polysaccharea ATCC 43768]
          Length = 248

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 73/121 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +   +L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVPELSYVQKTITGRYSVYEEPLYTVALIYLLMTTFLGWIFLRLEK 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|253690633|ref|YP_003019823.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251757211|gb|ACT15287.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 242

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   + S + G+  +   T L        G    LL +       +P ++
Sbjct: 17  TFPEGPLGGAALTLLMSLLAGVASAALGTILGVALAMSRGVWSALLAMVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+ RGQ
Sbjct: 77  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LGL+  +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            N++    +E+ L    +Y    + + L  NR+NA+   +EK
Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLSLELLANRVNARFNQQEK 228


>gi|288962138|ref|YP_003452433.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288914404|dbj|BAI75889.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 405

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 61/81 (75%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            ++ +TAA++AE VR GL A+P+GQ EAA ALGL++ + T L++LPQA+R +IPP+ +Q+
Sbjct: 276 GMTLFTAAYLAEAVRGGLQAIPKGQYEAADALGLSYWQKTMLIVLPQALRIVIPPIVNQF 335

Query: 332 LNLLKNSSLAVAVGFADLVSV 352
           ++  K++SL   VG  DL++ 
Sbjct: 336 ISAFKDTSLVTIVGLYDLLTA 356


>gi|118590774|ref|ZP_01548175.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Stappia aggregata IAM 12614]
 gi|118436750|gb|EAV43390.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Stappia aggregata IAM 12614]
          Length = 268

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 79/127 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   +AFIAE+ R+G+ AV +GQ+EAA ALG+      RL++ PQA+++I+PPL + 
Sbjct: 142 LALTIGYSAFIAEVFRAGIQAVDKGQIEAAEALGMNGWLRFRLIIFPQALKTILPPLGND 201

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSL   +G AD+  +G      + +  E   +   IYL ++I ++L + +   
Sbjct: 202 FVALIKDSSLVSVLGVADITQLGKVYAAGSFRYFETYNVVALIYLMMTITLSLALRKFER 261

Query: 391 KIALKEK 397
              ++E+
Sbjct: 262 TKQIQER 268


>gi|304398822|ref|ZP_07380692.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304353526|gb|EFM17903.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 222

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLSR +  +    L  +Y+S F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSRFWPVRW---LARIYVSIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ +E +R  + ++ RGQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYASESLRGAISSIERGQWEAAASIGMTRWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA R+ +PPL + +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   NRL   +  ++ +
Sbjct: 194 LIYWVMATVLSALQNRLEQHVNRQDSE 220



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G ++   RLS    V W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGALFTLQLSIGGMFFGLLLGFILALMRLSRFWPVRWLARIYVSIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNN 173
           Y  +    + + PIP   I    G+ LN 
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNT 99


>gi|303246939|ref|ZP_07333215.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491646|gb|EFL51529.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 292

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 82/133 (61%), Gaps = 3/133 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   FM+  + L     A++ EIVR G+++V +GQ++AA +LG+T   A R ++LPQAMR
Sbjct: 133 VMTPFMAALLGLGLNEGAYLTEIVRGGILSVDKGQIDAATSLGMTRLMAMRRIVLPQAMR 192

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLS 378
            I+PP+ ++++ LLK SS+A A+ + +L+     I     + +E++++   W  I +++ 
Sbjct: 193 VIVPPIGNEFIGLLKTSSMASAIAYTELLHKAQIIYFVNAKVMELLIVATGWYLIVVTIL 252

Query: 379 IMIALFMNRLNAK 391
            ++ + + R  A+
Sbjct: 253 SVVQVGIERRFAR 265


>gi|299822124|ref|ZP_07054010.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299815653|gb|EFI82891.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 487

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 68/91 (74%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 357 FLSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTRGTSMRYIILPQAVKNILP 416

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L +++++++K SS+   +G  +L+ V G +
Sbjct: 417 ALGNEFVSVIKESSIVSVIGVGELMFVTGVV 447


>gi|227329655|ref|ZP_03833679.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 242

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 114/223 (51%), Gaps = 11/223 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   + S + GI  ++  T L        G    LL +       +P ++
Sbjct: 17  TFPDGPLGGAALTLMMSLLAGIASAILGTILGVALAMSRGWWSALLAMVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+ RGQ
Sbjct: 77  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LGL+  +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            N++    +E+ L    +Y    + + L  N +NA+   +EK+
Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLSLELLANGVNARFNQQEKQ 229


>gi|84496802|ref|ZP_00995656.1| putative glutamate transporter [Janibacter sp. HTCC2649]
 gi|84383570|gb|EAP99451.1| putative glutamate transporter [Janibacter sp. HTCC2649]
          Length = 223

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 72/126 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS Y  AFI E +RSG+  VP GQ EAA A+GLT  ++ R VLLPQA R  I P+ S 
Sbjct: 98  VVLSIYHGAFICEALRSGVNTVPLGQAEAARAIGLTFGQSMREVLLPQAFRGAIAPIGST 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KN+++A  +G  +  +    II   G  I I LI+   ++ L++ +      L+ 
Sbjct: 158 IIALTKNTTVAAVIGVGEATNAMNVIIENEGSGITIFLIFALGFVILTLPLGTAFTALSR 217

Query: 391 KIALKE 396
           ++A+K 
Sbjct: 218 RLAVKR 223


>gi|319763454|ref|YP_004127391.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330824299|ref|YP_004387602.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317118015|gb|ADV00504.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329309671|gb|AEB84086.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 222

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 80/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   I L  Y+ A+++EIVR  + ++ +GQMEAA ++GL+  +A R V+LPQA+  +
Sbjct: 87  PAFVCGVIGLGIYSGAYVSEIVRGAIQSIDKGQMEAARSIGLSSGQAMRSVVLPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +Y  L+    L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIAVVYFVLTGATTL 206

Query: 384 FMNRLNAKI 392
            +  +  ++
Sbjct: 207 VLRHMELRL 215


>gi|319761713|ref|YP_004125650.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317116274|gb|ADU98762.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 232

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 83/135 (61%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + EF+  +I +     A+++E +R G+ ++P  Q+EA+ ALGL++ +A RLV+LPQA+R 
Sbjct: 98  NSEFIFAFIGIGLCLGAYMSEDLRGGIRSIPTSQLEASRALGLSYLQAFRLVILPQAVRV 157

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L +  + L KN+SLA+ VG  +L  V   + +QT +  EI L    +YL LS+++ 
Sbjct: 158 SMPALINHTVLLFKNTSLAMTVGAVELTYVTKEVESQTFRTFEIYLASTVMYLGLSLLLM 217

Query: 383 LFMNRLNAKIALKEK 397
            F   +  +I ++ +
Sbjct: 218 WFGAVIENRIRIRNR 232


>gi|145224166|ref|YP_001134844.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|315444501|ref|YP_004077380.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|145216652|gb|ABP46056.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
 gi|315262804|gb|ADT99545.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 310

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 45/191 (23%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALK 241
           ++ V+S V+GIVL +  T  RLS +         P+L    ++  ++  G P  V +A  
Sbjct: 74  QLTVYSMVIGIVLGVILTIMRLSSN---------PVLSSVAWVFLWIFRGTPVYVQLAFW 124

Query: 242 ------YQ------------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                 YQ            LHFD   L   +F         F    I L+   AA++AE
Sbjct: 125 GLMPTIYQNIQLGVPFGPSLLHFD---LQDLSF--------PFALAVIGLALNEAAYMAE 173

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR+G+ +VP GQ+EA+ ALG++  +A R  +LPQAMR IIPP  ++ ++LLK +SL  A
Sbjct: 174 IVRAGITSVPEGQLEASTALGMSWGRAMRRTVLPQAMRVIIPPTGNEVISLLKTTSLVTA 233

Query: 344 VGFA-DLVSVG 353
           V +A DL S+ 
Sbjct: 234 VPYAFDLYSIA 244


>gi|291166921|gb|EFE28967.1| amino acid ABC transporter, permease protein [Filifactor alocis
           ATCC 35896]
          Length = 214

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 94/180 (52%), Gaps = 22/180 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           ++ PLL  + FL FGLP +             PV+        S   P F ++++A +  
Sbjct: 57  RSTPLLLQTMFLFFGLPLV-------------PVV--------SITLPRFTAIWLAFTLN 95

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R G+ ++P+GQ +AA  LGL+ +   R +++PQ ++  +P + ++ +NLLK
Sbjct: 96  YAAYFAEIFRGGIQSIPKGQYQAAKVLGLSKKNTFRYIIVPQVIKITLPSVANEVINLLK 155

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SL   +G +D++ V  ++ N     +  + +   +Y  L  ++   + R+  K A  E
Sbjct: 156 DTSLVYILGMSDILKVAKSVSNTYASFVPYLFVAC-LYFILVFLLTFALERIEEKFAYYE 214


>gi|158334197|ref|YP_001515369.1| polar amino acid ABC transporter, permease protein [Acaryochloris
           marina MBIC11017]
 gi|158304438|gb|ABW26055.1| polar amino acid ABC transporter, permease protein [Acaryochloris
           marina MBIC11017]
          Length = 397

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 13/132 (9%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ ++AA++AE VR GL ++P+GQ EAA ALGL       LV+LPQA+RS+IP +  Q+
Sbjct: 271 GLTLFSAAYLAENVRGGLQSIPQGQFEAAKALGLNPMLVLGLVVLPQALRSVIPAIVGQF 330

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYLSLSIMIAL 383
           + L K++SL   +G  +L  V  ++++Q    G+  E+     +L W+F YL     ++L
Sbjct: 331 IGLFKDTSLLSIIGLVELTGVSRSVLSQPRFIGRHGEVYLFIGLLYWLFCYL-----MSL 385

Query: 384 FMNRLNAKIALK 395
              RL  ++ +K
Sbjct: 386 GSRRLEHQLGVK 397


>gi|328958164|ref|YP_004375550.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4]
 gi|328674488|gb|AEB30534.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4]
          Length = 473

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 110/204 (53%), Gaps = 17/204 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F  + + G++L LF    ++  +          +I+T  +  L  + LI L + ++F  P
Sbjct: 285 FAIATIFGVILGLFNASPNKVLN----------WIATIYVDILRGIPLIVLAFFIYFSIP 334

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              QF     S   P +++  I LS  T A+IAE+VR G+ AV  GQ+EA+ +LGLT+  
Sbjct: 335 ---QFL----SIQIPAYIAGVITLSLNTTAYIAELVRGGIQAVDTGQLEASRSLGLTYNT 387

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + R V+LPQA++ +IP   +Q++  LK++S+   +G  +L   G  II +T  + ++ LI
Sbjct: 388 SMRKVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSGDMWLI 447

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              +Y+ +  ++  F N +  + +
Sbjct: 448 VGLMYIIIITILTKFSNYIERRTS 471



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 38/70 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       ATI G ++G    S NK++ WI  +YV++ R IP +V+ FF+
Sbjct: 270 LLKGLGRTLLLTIISFAIATIFGVILGLFNASPNKVLNWIATIYVDILRGIPLIVLAFFI 329

Query: 149 YKSVLSVLPI 158
           Y S+   L I
Sbjct: 330 YFSIPQFLSI 339


>gi|313890203|ref|ZP_07823838.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121564|gb|EFR44668.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 220

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 112/214 (52%), Gaps = 20/214 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           T+  +A  F+    LG++L++     SRH F  +  K    +Y+S  ++ G+P +V++  
Sbjct: 23  TIGISALSFLTGISLGVLLAILGR--SRHGFFRRIVK----VYVS--IMRGVPMIVVL-- 72

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + L+F  P    FN        P  +  YI  S  ++A+I+EI RS + AV  GQ EAA
Sbjct: 73  -FMLYFGMP---YFNL-----QLPALLCAYIGFSLVSSAYISEIFRSSINAVALGQWEAA 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL  ++  + V+LPQA+R  IPPL +  ++++K+SSLA  +   D+      +  + 
Sbjct: 124 KALGLPQKRVIKKVILPQAIRIAIPPLGNVVIDMIKSSSLAAMITVPDIFQNAKIVGGRE 183

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              + + ++  FIY SL  +   F   L  K+ L
Sbjct: 184 WDYMSMYILVAFIYWSLCYLFENFQAYLEHKLQL 217


>gi|315037375|ref|YP_004030943.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1112]
 gi|312275508|gb|ADQ58148.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1112]
          Length = 494

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I VFS ++GIVL +     RLSR+   K    + + YI    I G P +V I   Y    
Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSRN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 352 ---------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484



 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            VN   N +EK NL +   +L   A +   +      + + YA   + G   T  +    
Sbjct: 249 AVNKTINRVEKKNL-INKEYLPAAAKYM--KTAQKTNTMAKYAPYFVKGVGYTLVITVFS 305

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 306 VLIGIVLGMLLALMRLSRNKLLHWIAVCYIEFIRGTPQMVQILFVY 351


>gi|312115424|ref|YP_004013020.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220553|gb|ADP71921.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 244

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 75/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +    L  +T++ +A  + + + ++PRGQ  AA ALGLT R++   VLLP A R + P
Sbjct: 109 FYTAAFGLGLFTSSRVAVQLAAAITSMPRGQKMAATALGLTTRQSYTNVLLPMAYRIVFP 168

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KNSS+A+ +G A+L      + + T Q  +       IYL L+I I   M
Sbjct: 169 PLTSELLNLIKNSSVALTIGVAELTQSARNMDSYTFQTFQAFTAATLIYLVLNITITAVM 228

Query: 386 NRLNAKIAL 394
            R+   +++
Sbjct: 229 RRIEHGVSV 237


>gi|229823498|ref|ZP_04449567.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271]
 gi|229786942|gb|EEP23056.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271]
          Length = 470

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 86/159 (54%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ +S F+ FG+P +  +       F   V G                    LS  
Sbjct: 318 RGVPLIVLSFFIYFGIPQMTGV------RFSSAVAG-----------------ITTLSLN 354

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEIVR G+ A+ +GQMEA+ +LGL++ K  + ++LPQA++ +IP   +Q++  LK
Sbjct: 355 AAAYVAEIVRGGIQAIDKGQMEASRSLGLSYGKTMQKIILPQAIKLMIPSFINQFVITLK 414

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+   +G  +L   G  II +T Q+  + LI   +YL
Sbjct: 415 DTSILSVIGLVELTQTGSVIIARTYQSGSMWLIVGLMYL 453



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T W+A   +  A I+G ++G  R+ AN  ++ I  VYV++ R +P +V+ FF
Sbjct: 269 ALLSGLGTTLWIALISVALALILGIILGLLRVQANPWLSGIAAVYVDLMRGVPLIVLSFF 328

Query: 148 LY 149
           +Y
Sbjct: 329 IY 330


>gi|222102914|ref|YP_002539953.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739515|gb|ACM40248.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 250

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 20/210 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247
           VFS  L   LS+    L+R    +T     L +  TFL++   G+P L+LI   Y   F 
Sbjct: 37  VFSIALAFPLSILLA-LARMSKWRT-----LRWPVTFLVYVTRGVPLLMLILWCY---FL 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+L       G+ V P F+++   L  Y + F++E+VRSG++A+  GQMEAA ALG ++
Sbjct: 88  VPLLT------GADV-PSFITMLTTLVVYQSCFLSEVVRSGIVALGHGQMEAAKALGHSY 140

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEI 366
             A R V+LPQA+ ++IP + S +++ +K+++L   +   DL      + N    Q  ++
Sbjct: 141 PSAMRYVVLPQALYNVIPSILSTFVSTIKDTTLGSVINVPDLTFAANQVNNDLLTQPFQV 200

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            LI   IY  +   +     RL   I+ + 
Sbjct: 201 YLILALIYYVICWSLTHAAKRLEGSISRRR 230


>gi|187779364|ref|ZP_02995837.1| hypothetical protein CLOSPO_02960 [Clostridium sporogenes ATCC
           15579]
 gi|187772989|gb|EDU36791.1| hypothetical protein CLOSPO_02960 [Clostridium sporogenes ATCC
           15579]
          Length = 188

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 93/159 (58%), Gaps = 16/159 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  P+L     + +GLPT+        ++F + P+LG  NF       P+F +  +ALS 
Sbjct: 21  RGTPVLVQLYIIYYGLPTI-------GINFPEVPILGS-NF-------PDFFAGILALSI 65

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A++AEI+R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++ ++
Sbjct: 66  NSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITII 125

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           K SS+   +G  +L+    T+     +  E +L+   +Y
Sbjct: 126 KESSIVSIIGIHELMYNADTVRGNIFKPFEPLLVAAVMY 164


>gi|241554154|ref|YP_002979367.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863460|gb|ACS61122.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 252

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 11/167 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P+L       G+ V P F+++   L  Y +AF++E+VR+G++
Sbjct: 74  GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+A  ALG  +  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL 
Sbjct: 124 ALGPGQMDAGRALGHGYLGAMRFIILPQALYNMIPSIISTFVSTIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                + NQ   Q  ++ LI   +Y ++   +  F NRL   I  + 
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFANRLERSITRRR 230


>gi|330816870|ref|YP_004360575.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327369263|gb|AEA60619.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 248

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 115/219 (52%), Gaps = 21/219 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTF-LIF-GLPTLVLI 238
           + T   +F  S V+G +LSL   A R+SRH+       LP  +   + L+F G P L+ +
Sbjct: 19  VPTTLGLFFLSLVIGGLLSLVIVAMRVSRHW-------LPNRFARAYILVFRGSPLLIQM 71

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPR 294
            L Y        LG+F  I  S + P     Y+    +L+  TA + AEI+R GL+AVP 
Sbjct: 72  FLVYY------GLGEFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMAVPV 125

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EA  A+GL+     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V  
Sbjct: 126 GQIEAGYAIGLSGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQ 185

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            II QT +  E+ +    IYL L+ ++   +  L  +++
Sbjct: 186 QIIQQTYRTTEVFVCAALIYLFLNFVVVRLLGFLETRLS 224


>gi|319899107|ref|YP_004159200.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella clarridgeiae 73]
 gi|319403071|emb|CBI76626.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella clarridgeiae 73]
          Length = 250

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 76/123 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + +  AL  +T+A IAE +RSG+ ++P GQ  AA+A+G    ++ R ++LP+A+R+I
Sbjct: 112 PPILLITCALGFFTSARIAEQIRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPRAIRTI 171

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLTS+ + ++KNSS+A AV   +L+      I +     E  L+   +Y+ +S+ I +
Sbjct: 172 MPPLTSEAMGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTILYILISLFIFV 231

Query: 384 FMN 386
            M 
Sbjct: 232 IMT 234


>gi|300215129|gb|ADJ79545.1| Amino acid ABC transporter [Lactobacillus salivarius CECT 5713]
          Length = 499

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 22/201 (10%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FVLGI+L+L      R  H K    L + YI    I G P +V +   Y           
Sbjct: 316 FVLGIILALM-----RLGHNKLLHGLAVAYIE--FIRGTPLMVQVMFVY----------- 357

Query: 254 FNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F  G+ +   P   +  IA+S  + A++AE++RSG+ ++  GQ EAA +LG++ ++  
Sbjct: 358 --FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 415

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           + V++PQA+++I P L ++++ L+K SS+   +G  DL+     + + T + +  + I M
Sbjct: 416 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 475

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            IY  L+  ++  +N    K+
Sbjct: 476 VIYFVLTFTLSKGLNYFEGKM 496


>gi|148926135|ref|ZP_01809821.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145845614|gb|EDK22706.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 261

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%)

Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276
           L ++STF   LI G P LV + L Y +  +   LG  N ++ G           I LSC+
Sbjct: 96  LRFLSTFYIELIRGTPLLVQVLLIYYIIANN--LGLDNRYVAG----------VIILSCF 143

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q+ NL+K
Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 203

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL   +   +L      I + T   +E  +I    YL L++ I++F   L  K
Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERK 258



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 42/82 (51%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + +
Sbjct: 39  CSFSISAYHFDFSAIATYKEKFLQGFLNTLVISFFSLLLSIILGGIFCAFSLSSIVFLRF 98

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           +   Y+E+ R  P LV +  +Y
Sbjct: 99  LSTFYIELIRGTPLLVQVLLIY 120


>gi|57237748|ref|YP_178996.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni RM1221]
 gi|86150652|ref|ZP_01068874.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151089|ref|ZP_01069305.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86152546|ref|ZP_01070751.1| amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|121612211|ref|YP_001000594.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157415177|ref|YP_001482433.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005525|ref|ZP_02271283.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205356403|ref|ZP_03223168.1| putative ABC type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562539|ref|YP_002344318.1| putative ABC-type amino-acid transporter permease [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283956263|ref|ZP_06373743.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315124413|ref|YP_004066417.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|57166552|gb|AAW35331.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni RM1221]
 gi|85838913|gb|EAQ56180.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85842259|gb|EAQ59505.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85843431|gb|EAQ60641.1| amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|87248890|gb|EAQ71853.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|112360245|emb|CAL35040.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|157386141|gb|ABV52456.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|205345788|gb|EDZ32426.1| putative ABC type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|283791983|gb|EFC30772.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284926153|gb|ADC28505.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|307747818|gb|ADN91088.1| Amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315018135|gb|ADT66228.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315058359|gb|ADT72688.1| Putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni S3]
 gi|315927530|gb|EFV06863.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315930760|gb|EFV09765.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
 gi|315932599|gb|EFV11530.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 250

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 61/80 (76%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG++AVPRGQ EA+ + G T+ +  R +++PQ +R I+PP+T+Q
Sbjct: 122 LGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTNQ 181

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            +NL+KN+S+ + VG A+L+
Sbjct: 182 MVNLIKNTSVLLIVGGAELM 201



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A + GF+ T  ++   ++ ATI GT+ G    S  K++    R+YVE+F+N+P ++ IFF
Sbjct: 43  AFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF 102

Query: 148 LY 149
           L+
Sbjct: 103 LF 104


>gi|317053832|ref|YP_004117857.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951827|gb|ADU71301.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 214

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 66/101 (65%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS Y  A+IAE+ R+G+ AVP+GQ E +  LGL+ R+    V+LPQ    ++P
Sbjct: 85  FAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGLSKRQTFLSVILPQTRGIVLP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           PL  QYL+L+K++S+   +G ++L+  G  I+++ GQ + I
Sbjct: 145 PLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPVVI 185


>gi|89053402|ref|YP_508853.1| amino acid ABC transporter permease [Jannaschia sp. CCS1]
 gi|88862951|gb|ABD53828.1| amino acid ABC transporter membrane protein, PAAT family
           [Jannaschia sp. CCS1]
          Length = 265

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 79/135 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P      IAL+   +AFIAE+ R+GL +V  GQ+EAA ALGL      R ++ PQA+R+I
Sbjct: 131 PLLWRAVIALAIGYSAFIAEVFRAGLQSVDPGQIEAANALGLNRWNRFRHIIFPQAIRTI 190

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL + ++ ++K+SSL   +G  D+  +G        +  E   +   IYL++++ +++
Sbjct: 191 LPPLGNDFVAMVKDSSLVSVLGVLDVTQLGKVTAASNFRYFETYNVVALIYLTITVTLSI 250

Query: 384 FMNRLNAKIALKEKK 398
            + R+  ++   E++
Sbjct: 251 LLRRMEKRMRQGERR 265


>gi|323356727|ref|YP_004223123.1| amino acid ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323273098|dbj|BAJ73243.1| ABC-type amino acid transport system, permease component
           [Microbacterium testaceum StLB037]
          Length = 218

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 71/102 (69%), Gaps = 5/102 (4%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTA ++AE +RSG+  VP GQ EAA ALGLT  +   L++LPQA RS+IPP+ S +
Sbjct: 94  ALGIYTATYVAEAIRSGVNTVPVGQAEAARALGLTFGQVMSLIVLPQAFRSVIPPMVSVF 153

Query: 332 LNLLKNSSLAVAVGFADLVSVGG--TIINQTGQAIEIILIWM 371
           + LLKN++  VA GF+ +V++G     +++ G+   I+++W+
Sbjct: 154 IALLKNTT--VAAGFS-IVNIGSVRNYLSERGENAFIVILWI 192


>gi|289627072|ref|ZP_06460026.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|330866807|gb|EGH01516.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 482

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 232 LPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +PTLV + L Y   F  P +L +   +  +  S E++   IAL    AA+ +E +RSGL 
Sbjct: 69  VPTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L 
Sbjct: 126 AIPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
                + N T +  E  L+   +YL++S
Sbjct: 186 YATREVENYTFRTFEAYLVATVVYLAIS 213



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 305 YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 354

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 355 GAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 414

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 415 QEVTFAANQINNQ 427


>gi|218887770|ref|YP_002437091.1| binding-protein-dependent transporters inner membrane component
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758724|gb|ACL09623.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 357

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 73/129 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+S  + L  Y  A+I EIVR+GL  V RGQ EA+ + GLT R+  R V+LPQA R I
Sbjct: 225 PVFLSGVVVLGLYEGAYITEIVRAGLEGVERGQWEASASTGLTRRQQLRHVILPQAFRLI 284

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL  Q+++ +K+S++   +   +L   G  ++  T    EI L    +YL L+   +L
Sbjct: 285 VPPLAGQFISTIKDSAILSVISIRELTFQGMELMAATYLTFEIWLTVAALYLMLTFSCSL 344

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 345 AARHVERRL 353


>gi|322388196|ref|ZP_08061800.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus infantis ATCC 700779]
 gi|321140868|gb|EFX36369.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus infantis ATCC 700779]
          Length = 227

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 19/209 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPV 250
           +LG++L+ FA R          K  PL + +   I+   G P +V I + + L H   P 
Sbjct: 33  ILGVLLA-FAQR---------SKIKPLAWFANLYIWVFRGTPMMVQIMIAFALMHISAPT 82

Query: 251 LGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +     IG   V     +   + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  + 
Sbjct: 83  IQ----IGILDVDLTRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKN 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  +L 
Sbjct: 139 AMRYVILPQAIKNILPSLGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTPLLF 198

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             F YL ++ ++ L +     ++   +KK
Sbjct: 199 AAFYYLIMTSILTLALKAFENRMGQGDKK 227


>gi|325526518|gb|EGD04078.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 297

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 16/232 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           G FL  R +    LT   N  +  V +  LGIVL +  T + R        A+   YI  
Sbjct: 66  GQFLTARAI----LTGLGNTIVMTVLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYI-- 118

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +L  G P ++ + L + L    P LG     +F  +    V   F++  + L     A+ 
Sbjct: 119 WLFRGTPVILQLLLWFNLALVFPTLGIPGIAEFRTV---DVMTPFLAALLGLGINQGAYT 175

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+VR+GL++V  GQ EAA ++G+   +A R ++LPQAMR I+PP+ ++ + ++K +SLA
Sbjct: 176 SEVVRAGLLSVDTGQYEAAKSIGMPRLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLA 235

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             V +A+++     I     + IE++++    YL++  +++L   R+  + A
Sbjct: 236 SVVQYAEMLHNAQNIYYANARVIELLIVAGIWYLAVVTVLSLAQARVERRFA 287


>gi|326318771|ref|YP_004236443.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375607|gb|ADX47876.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 222

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 84/139 (60%), Gaps = 1/139 (0%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G  +  E MS  I    + AA+ +EI+R+G+ ++PRGQ+ A  ALG+T+ +  +LV+
Sbjct: 83  FLVGRPIGAE-MSAVITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMKLVI 141

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA R+++P L +Q + L +++SL  A+G  D++    T     G+ IE  L+   +Y 
Sbjct: 142 LPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYF 201

Query: 376 SLSIMIALFMNRLNAKIAL 394
            +   ++  + RL+ KIA+
Sbjct: 202 IMCFALSSAVKRLHRKIAI 220


>gi|167031268|ref|YP_001666499.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166857756|gb|ABY96163.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 222

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 104/191 (54%), Gaps = 20/191 (10%)

Query: 214 KTGKALPL-----LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFM 267
           +  K LPL     +Y+S F   G P LV +   + ++F  P +G + + I  S       
Sbjct: 45  RLSKILPLNWLARVYVSFFR--GTPLLVQL---FVIYFGMPQIGIELDPIPAS------- 92

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              I LS   AA+I EI+R+ + ++ RGQ EAA ++G+T  +A R  +LPQA+R+ +PPL
Sbjct: 93  --LIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGMTRVQAMRRAILPQALRTALPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +++L+K+++LA  +   +L      I  +T +   + +    IY  L  ++A F NR
Sbjct: 151 GNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFTMYVAVAVIYWVLCSILAHFQNR 210

Query: 388 LNAKIALKEKK 398
           + A++   +++
Sbjct: 211 MEARVNQHDQE 221


>gi|313668108|ref|YP_004048392.1| binding-protein-dependent transport systems hypothetical protein
           [Neisseria lactamica ST-640]
 gi|313005570|emb|CBN87006.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria lactamica 020-06]
          Length = 248

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 73/121 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PPL S+
Sbjct: 122 LALIANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPPLASE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL   +   +L  V  TI  +     E +     IYL ++  +     RL  
Sbjct: 182 FITLLKDSSLLSVIAVPELSYVQKTITGRYSIYEEPLYTVALIYLLMTTFLGWIFLRLEK 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|308067187|ref|YP_003868792.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
 gi|305856466|gb|ADM68254.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
          Length = 216

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 37/221 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFA-TRLS-----RHFHEKTGKALPLLYISTFLIFGLPT 234
           LT++      VFSF LGI+  +   TRL        F     + LPLL I  F+   LP+
Sbjct: 21  LTLEVAIYSIVFSFALGILFGILRYTRLPVISQVAAFIIDLIRNLPLLLIIFFIGMVLPS 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +                       G ++S ++ ++   LS +  A IAEIVRSGL +V +
Sbjct: 81  I-----------------------GISISIKWAAI-TGLSIFEGAMIAEIVRSGLNSVHK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--- 351
           GQ+EAA + GL++ +    ++LPQA+R ++PP+ SQ+++L K++SLAV +   +L     
Sbjct: 117 GQVEAARSSGLSYSQTLWHIILPQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHNIQ 176

Query: 352 -VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            VGG   NQ+   I  +L   F+Y +++  ++L   RL  +
Sbjct: 177 IVGGQ--NQSF-VIPALLFAAFLYFAVNYSMSLIARRLEVR 214


>gi|218235175|ref|YP_002365195.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus B4264]
 gi|218163132|gb|ACK63124.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus B4264]
          Length = 230

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           S+PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   SYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKFLNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYIIVGAYYLVLVLLFTYFVNLLENRLQRKE 214



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY T +L   + T  L  + ++  ++IG L    R+S NK +  I  VY+ + R  P +
Sbjct: 7   SSYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKFLNSIAHVYIAIIRGTPLI 65

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 66  VQIAILYFGITSVV 79


>gi|116492898|ref|YP_804633.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus pentosaceus ATCC 25745]
 gi|116103048|gb|ABJ68191.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Pediococcus pentosaceus ATCC 25745]
          Length = 488

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 23/203 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+ G +L+L   RLS +   K  + L   Y+    + G P +V      QL F    
Sbjct: 303 IFGFITGTLLALL--RLSDN---KVLRGLSAAYVE--FVRGTPLMV------QLMFVYFG 349

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG F  +      P   +  IA+S  + A++AE++R G+ +V  GQ EAA +LGL  R  
Sbjct: 350 LGLFVNL------PALTAGIIAVSLNSGAYVAEVIRGGINSVDDGQREAAESLGLNKRDR 403

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V++PQA+++I P L +++++L+K SS+   +G  DL+     + + T + +  I++ 
Sbjct: 404 MRFVIMPQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKIVQSDTYRGVAPIVVA 463

Query: 371 MFIY----LSLSIMIALFMNRLN 389
           M +Y     SLS ++  +  + N
Sbjct: 464 MILYFVMTFSLSRLLKFYERKFN 486



 Score = 36.2 bits (82), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+ VG+  T  ++  G+I   I GTL+   RLS NK++  +   YVE  R  P +V + F
Sbjct: 288 AMGVGY--TILISILGVIFGFITGTLLALLRLSDNKVLRGLSAAYVEFVRGTPLMVQLMF 345

Query: 148 LY 149
           +Y
Sbjct: 346 VY 347


>gi|90962512|ref|YP_536428.1| amino acid ABC transporter [Lactobacillus salivarius UCC118]
 gi|90821706|gb|ABE00345.1| Amino acid ABC transporter [Lactobacillus salivarius UCC118]
          Length = 499

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 22/201 (10%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FVLGI+L+L      R  H K    L + YI    I G P +V +   Y           
Sbjct: 316 FVLGIILALM-----RLGHNKLLHGLAVAYIE--FIRGTPLMVQVMFVY----------- 357

Query: 254 FNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F  G+ +   P   +  IA+S  + A++AE++RSG+ ++  GQ EAA +LG++ ++  
Sbjct: 358 --FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 415

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           + V++PQA+++I P L ++++ L+K SS+   +G  DL+     + + T + +  + I M
Sbjct: 416 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 475

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            IY  L+  ++  +N    K+
Sbjct: 476 VIYFVLTFTLSKGLNYFEGKM 496


>gi|289627333|ref|ZP_06460287.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289650580|ref|ZP_06481923.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330870381|gb|EGH05090.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330892337|gb|EGH24998.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 229

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I + +   R SRH+  +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF  +  S + P     F    + ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPVG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|169829527|ref|YP_001699685.1| polar amino acid transport system permease [Lysinibacillus
           sphaericus C3-41]
 gi|168994015|gb|ACA41555.1| polar amino acid transport system permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 234

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 112/208 (53%), Gaps = 15/208 (7%)

Query: 179 PTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           PTL   +   A+I VFS + GIVL +    + +  +    K +  +YIS   I G P LV
Sbjct: 15  PTLLQYLPVTAEILVFSIIFGIVLGIMLA-IPKLLNVALLKQIITIYIS--FIRGTPILV 71

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVP 293
            + L +   +  P L +F  I  + +     ++Y  +  YT   AA  AEI R+ ++ V 
Sbjct: 72  QLFLVF---YGVPALLKFIHIDVTRLD----AMYFVIITYTLSNAAAFAEIFRAAILTVD 124

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA ++GL   +A   ++ PQA+R   P + +  ++ LK++SLA ++G  D+V  G
Sbjct: 125 RGQIEAAFSVGLNGPQAFLRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRG 184

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMI 381
            T+I  T +A EI +    +Y ++ I++
Sbjct: 185 ETLIASTTRAFEIYVALSIVYFAIVIIL 212


>gi|282902328|ref|ZP_06310221.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus C160]
 gi|282596787|gb|EFC01746.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus C160]
          Length = 239

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 118/198 (59%), Gaps = 10/198 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+R+  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      +++ T + + 
Sbjct: 147 TYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVVSTTYEYLT 206

Query: 366 IILIWMFIYLSLSIMIAL 383
           I ++   +Y  +  +I++
Sbjct: 207 IYVLVALMYWVVCFIISI 224


>gi|227891436|ref|ZP_04009241.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|227866583|gb|EEJ74004.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
          Length = 501

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 105/201 (52%), Gaps = 22/201 (10%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FVLGI+L+L      R  H K    L + YI    I G P +V +   Y           
Sbjct: 318 FVLGIILALM-----RLGHNKLLHGLAVAYIE--FIRGTPLMVQVMFVY----------- 359

Query: 254 FNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F  G+ +   P   +  IA+S  + A++AE++RSG+ ++  GQ EAA +LG++ ++  
Sbjct: 360 --FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAIGQTEAARSLGMSQKQTY 417

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           + V++PQA+++I P L ++++ L+K SS+   +G  DL+     + + T + +  + I M
Sbjct: 418 QYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQLVQSATYKGVAPLAITM 477

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            IY  L+  ++  +N    K+
Sbjct: 478 VIYFVLTFTLSKGLNYFEGKM 498


>gi|91778559|ref|YP_553767.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691219|gb|ABE34417.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 246

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/131 (41%), Positives = 74/131 (56%), Gaps = 4/131 (3%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           PLL    F  FG  TL  +   +    + P VLG   F      S E  + ++ L+CY+ 
Sbjct: 67  PLLVQLLFWYFGAATL--LPQPWMTWLNTPHVLGAAPF-ALHWPSFELFAGWLGLTCYST 123

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAE  R+G+  V   Q +A  ALG+T     R V+LPQA+R   PPL  QY+N++KNS
Sbjct: 124 AFIAEEFRAGIRGVGIAQYQAGAALGMTRYTTLRHVILPQAVRIATPPLAGQYMNIVKNS 183

Query: 339 SLAVAVGFADL 349
           SL +A+G A+L
Sbjct: 184 SLTMAIGVAEL 194



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D  Y   +  GF+ T  L+    + AT++G  +   +++  + VA   R+YV VFRN P 
Sbjct: 9   DPRYLGWLAHGFLITLVLSACVSVCATLLGFGLAMAQIAQQRSVAAAARLYVLVFRNSPL 68

Query: 142 LVVIFFLYKSVLSVLPIP 159
           LV + F Y    ++LP P
Sbjct: 69  LVQLLFWYFGAATLLPQP 86


>gi|17546978|ref|NP_520380.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17429279|emb|CAD15966.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 230

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 66/92 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++  AL  + AA++AEIVR+G+ A+PRGQME+A +LGL + +A RLVLLPQA+R+++
Sbjct: 94  QFNTMLTALVVFDAAYLAEIVRAGIQALPRGQMESARSLGLPYLQAMRLVLLPQALRNML 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           P L +Q ++ +K +SL   +   ++  V G I
Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEVSFVAGQI 185


>gi|171319193|ref|ZP_02908312.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171095621|gb|EDT40582.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 297

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 5/205 (2%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +  LGIVL +  T + R        A+   YI  +L  G P ++ + L + L    P 
Sbjct: 86  VLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYI--WLFRGTPVILQLLLWFNLALVFPT 142

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           LG        TV     F++  + L     A+ +E+VR+GL++V  GQ EAA ++G+   
Sbjct: 143 LGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIGMARL 202

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V +A+++     I     + IE+++
Sbjct: 203 QALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVIELLI 262

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIA 393
           +    YL++  +++L   R+  + A
Sbjct: 263 VAGIWYLAVVTVLSLAQARVERRFA 287


>gi|296332721|ref|ZP_06875181.1| cystine ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673066|ref|YP_003864738.1| cystine ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150001|gb|EFG90890.1| cystine ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411310|gb|ADM36429.1| cystine ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 234

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ G++L+L  T L+R    +  + +  +Y+S   I G P LV + + + L      
Sbjct: 40  ILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA--IRGTPLLVQLFIIFYL------ 90

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FN     T+ P F S  IA S    A+ +EI+R+ +++VP+GQ EA   +G+TH+K 
Sbjct: 91  FPAFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKT 145

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369
              V+LPQA R  IPPL++ +++L+K++SLA  +  A+L      I  +    I +I I 
Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIE 205

Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393
                WM  +L LS++  +   RL+  +A
Sbjct: 206 AAFIYWMICFL-LSLVQHVIERRLDRYVA 233


>gi|293605797|ref|ZP_06688170.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815792|gb|EFF74900.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 229

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 90/168 (53%), Gaps = 14/168 (8%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVRSG 288
           + H + P+L Q  F + G   + PE + L+            IAL+  +AA+IAE +RSG
Sbjct: 57  EYHRNVPLLVQVLFWYFGMPELLPEGLRLWLYDHNAEMSLAAIALALGSAAYIAEDIRSG 116

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+P  Q EAA ALG ++ +  R V++PQA+R  IPPL  + L L KN+S+A+A+G  +
Sbjct: 117 LRAIPWTQFEAARALGASYLQCMRYVIVPQALRISIPPLVGRALLLFKNTSVAMAIGVME 176

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L      I N+T +          +YL  S +I    +R+ A+  L  
Sbjct: 177 LTYQAREIENETYRTFATFGAATIMYLLGSFLIMAVGSRIYARYRLNR 224


>gi|269965300|ref|ZP_06179421.1| putative amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 40B]
 gi|269830101|gb|EEZ84329.1| putative amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 40B]
          Length = 246

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 23/128 (17%)

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           +G+PTL+ ++L +                       F +  IAL+   +AF+AE+ R G+
Sbjct: 102 YGMPTLLDVSLNH-----------------------FWAGVIALTIAESAFMAEVFRGGI 138

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+ RGQ EAA +LGL++ +  RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL
Sbjct: 139 QAISRGQHEAAESLGLSYWQKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDL 198

Query: 350 VSVGGTII 357
                 ++
Sbjct: 199 TRRANELV 206


>gi|33592313|ref|NP_879957.1| amino acids ABC transporter, permease protein [Bordetella pertussis
           Tohama I]
 gi|33596426|ref|NP_884069.1| amino acids ABC transporter, permease protein [Bordetella
           parapertussis 12822]
 gi|33602283|ref|NP_889843.1| amino acids ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
 gi|33566195|emb|CAE37101.1| amino acids ABC transporter, permease protein [Bordetella
           parapertussis]
 gi|33571958|emb|CAE41479.1| amino acids ABC transporter, permease protein [Bordetella pertussis
           Tohama I]
 gi|33576722|emb|CAE33800.1| amino acids ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
          Length = 229

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 25/232 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF-----ATRLS--RHF---HEKTGKAL 219
           FL+   LS     M T  ++F+ ++VL   L++       T L+  R F   + +  + +
Sbjct: 3   FLDAHYLSQLADGMMTTVQLFLVAWVLAFTLAVLLVVIRTTNLAPCRWFVDAYVEYHRNV 62

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    F  FG+P L+   ++  L+       Q N         E     IAL   +AA
Sbjct: 63  PLLVQVLFWYFGMPELLPEGVRGWLY-------QHN--------AELSLAAIALGLGSAA 107

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE +RSGL A+P  Q EAA ALG ++ +  R V++PQA+R  IPPL  + L L KN+S
Sbjct: 108 YIAEDIRSGLRAIPGTQFEAARALGSSYLQCMRHVIVPQALRISIPPLVGRALLLFKNTS 167

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +A+A+G  +L      I N+T +          +YL  S ++    +R+ A+
Sbjct: 168 VAMAIGVVELTYQAREIENETYRTFATFGAATLMYLLGSFLLMFIGSRVYAR 219


>gi|121601784|ref|YP_988958.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Bartonella bacilliformis KC583]
 gi|121602217|ref|YP_988989.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Bartonella bacilliformis KC583]
 gi|120613961|gb|ABM44562.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Bartonella bacilliformis KC583]
 gi|120614394|gb|ABM44995.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Bartonella bacilliformis KC583]
          Length = 250

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 74/114 (64%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +T+A IAE VRSG+ ++P GQ  AA+A+G T  ++ R +++P+A+R+I+PPLTS+ 
Sbjct: 120 ALGFFTSARIAEQVRSGIESIPSGQRYAAMAIGFTTYQSYRYIMIPRAIRTILPPLTSEA 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++KNSS+A AV   +L+      I +     E  ++   +Y+ +S+ I + M
Sbjct: 180 MGIVKNSSIAFAVSIHELMQFQYQTIEEVSHVYENYMLVTILYIIISLFIFVMM 233



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV-----AWICRVYVEVFRN 138
           +Y   +L GF NT  L+ S +I A  +G ++G  R   N  V       I  ++VE+ RN
Sbjct: 28  TYLDTLLDGFKNTAVLSISSLILAVFVGVVIGTVRTLPNTSVINNTFRAIGGIWVEIMRN 87

Query: 139 IPPLVVIFFLYKSVLSVLP 157
           IP LV +F  Y  V  + P
Sbjct: 88  IPLLVQVFLWYFVVPKIYP 106


>gi|242279196|ref|YP_002991325.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122090|gb|ACS79786.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 260

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 78/130 (60%), Gaps = 4/130 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+ +S  IA+S    A++ E+ R+G+ ++  GQ EAA +LG   ++   LV+LPQA R+I
Sbjct: 127 PDMLSAIIAMSVCYGAYMGEVFRAGIESIDDGQTEAARSLGFNKKETMFLVILPQAWRTI 186

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379
           +PP+ ++++ LLK+SSL   +  AD++  G     ++ Q  E    I L+++ I L LS 
Sbjct: 187 LPPVGNEFIALLKDSSLVSILAVADILRRGREFAAESFQYFETYTMIALVYLLITLILSR 246

Query: 380 MIALFMNRLN 389
            ++    RLN
Sbjct: 247 AVSHMEERLN 256



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V TF +    +  A IIG   G GR+S+NK +  +   YVEV R IP LV +F++Y +
Sbjct: 60  GIVVTFEVTICSIFGALIIGLFTGLGRISSNKFINLVASTYVEVVRGIPLLVQLFYIYYA 119

Query: 152 VLSVLPIPD 160
           +  VL +PD
Sbjct: 120 MGRVLQVPD 128


>gi|317506457|ref|ZP_07964258.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
 gi|316255218|gb|EFV14487.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
          Length = 275

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 74/122 (60%), Gaps = 8/122 (6%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L+L+   YQL     V         ST  P   ++   LS Y  A I EI+R+GL A
Sbjct: 117 VPVLILMIFAYQLFSRYAVFP-------STQVP-LAAVVFGLSVYNGALIGEILRAGLAA 168

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA+A+GLT  +  RL+LLPQA+ +++P L SQ + +LK+++L   +G+ +L+ 
Sbjct: 169 LPKGQSEAAVAVGLTKGQTVRLILLPQAVAAMLPALISQMVVVLKDAALGYQIGYIELIR 228

Query: 352 VG 353
            G
Sbjct: 229 SG 230



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 7/78 (8%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK--SVLSVLP---I 158
           ++ A ++GT +  G +S  +LV     V VE FR++P L+++ F Y+  S  +V P   +
Sbjct: 82  IVVALLVGTALAVGMISDRRLVRTAATVAVEAFRSVPVLILMIFAYQLFSRYAVFPSTQV 141

Query: 159 PDHSIVLPFGMFLNNRGL 176
           P  ++V  FG+ + N  L
Sbjct: 142 PLAAVV--FGLSVYNGAL 157


>gi|300865206|ref|ZP_07110024.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
 gi|300336797|emb|CBN55174.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
          Length = 398

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 102/190 (53%), Gaps = 22/190 (11%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG++L+L      R       K   +LYI   ++ GLP + ++       F   V+ 
Sbjct: 205 SFPLGVLLAL-----GRQSSLPVVKYFSILYIE--IVRGLPLIGIL-------FLGQVML 250

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF    G+      +    AL+ ++AA++AE VR GL +VPRGQ+EAA +LGL       
Sbjct: 251 QFFLPPGAPKLDRLVRAIAALTLFSAAYLAENVRGGLQSVPRGQIEAARSLGLNTPLVIL 310

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEI--- 366
           L++LPQA+R++IP +  Q++ L K++SL    G  +LV +  T++     +G+  E+   
Sbjct: 311 LIVLPQALRAVIPAIVGQFIGLFKDTSLLSLFGILELVGISRTVLANPAYSGRYAEVYVF 370

Query: 367 --ILIWMFIY 374
             ++ W+F Y
Sbjct: 371 IGVIYWVFCY 380


>gi|88596128|ref|ZP_01099365.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|88190969|gb|EAQ94941.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 84-25]
          Length = 250

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 61/80 (76%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG++AVPRGQ EA+ + G T+ +  R +++PQ +R I+PP+T+Q
Sbjct: 122 LGVGVYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTNQ 181

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            +NL+KN+S+ + VG A+L+
Sbjct: 182 MVNLIKNTSVLLIVGGAELM 201



 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A + GF+ T  ++   ++ ATI GT+ G    S  K++    R+YVE+F+N+P ++ IFF
Sbjct: 43  AFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF 102

Query: 148 LY 149
           L+
Sbjct: 103 LF 104


>gi|150398177|ref|YP_001328644.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150029692|gb|ABR61809.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 223

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 1/93 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP F+S   +LS  +AA+ AEI R+G+ A+P GQ EA+ ALGL++R     V+LPQ
Sbjct: 87  GIRLSP-FLSAVTSLSLVSAAYTAEIFRAGIEAIPHGQFEASAALGLSNRHTMVDVILPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A+R +IPPLT+  +N+LK+++LA  V   DL+ 
Sbjct: 146 AVRIVIPPLTNNCINVLKDTALASVVAMPDLLK 178


>gi|29829525|ref|NP_824159.1| arginine/ornithine transport permease [Streptomyces avermitilis
           MA-4680]
 gi|29606633|dbj|BAC70694.1| putative arginine/ornithine ABC transport permease [Streptomyces
           avermitilis MA-4680]
          Length = 312

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 71/117 (60%), Gaps = 3/117 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+PP  ++ +N+LK 
Sbjct: 167 AAYMAEICRAGLLSVDEGQTEASHALGMSHNKTLRRIVIPQAMRVIVPPTGNEVINMLKT 226

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           +SL   V + +L      I   +G  +E++ +   W  I  S+  +   ++ R  A+
Sbjct: 227 TSLVSVVQYPELFRYAQDIGQTSGAPVEMLFLAAAWYLIMTSVLSIGQYYVERYYAR 283


>gi|86150643|ref|ZP_01068865.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596538|ref|ZP_01099775.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|205356665|ref|ZP_03223426.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|218562559|ref|YP_002344338.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|85838904|gb|EAQ56171.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191379|gb|EAQ95351.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360265|emb|CAL35060.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|205345403|gb|EDZ32045.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|284926173|gb|ADC28525.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315927897|gb|EFV07220.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929286|gb|EFV08498.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 261

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LSC++AA++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q
Sbjct: 138 IILSCFSAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQ 197

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + NL+K+SSL   +   +L      I + T   +E  +I    YL L++ I++F   L  
Sbjct: 198 FANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLER 257

Query: 391 K 391
           K
Sbjct: 258 K 258



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 42/82 (51%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + +
Sbjct: 39  CSFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           +   Y+E+ R  P LV +  +Y
Sbjct: 99  LSTFYIELVRGTPLLVQVLLIY 120


>gi|293605348|ref|ZP_06687733.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816287|gb|EFF75383.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 367

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 18/179 (10%)

Query: 172 NNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           N+R    P TL + T      F+F +G++L+L      R       KAL ++YI   LI 
Sbjct: 154 NSRWGGLPLTLILATFG--IAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIE--LIR 204

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P + L+       F   V+       G T+  + +   IA+  + AA+IAE VR GL 
Sbjct: 205 GVPLISLL-------FMSSVMLPLFLPEGFTID-KLLRAQIAIIMFAAAYIAETVRGGLQ 256

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A+P+GQ E A +LGL + +  R ++LPQA++ +IPPL   +++L K++SL V +G  DL
Sbjct: 257 AIPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVGIFISLFKDTSLVVIIGIFDL 315


>gi|15614025|ref|NP_242328.1| ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10174079|dbj|BAB05181.1| ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 218

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 32/237 (13%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT---RLSRHFHEKTG 216
           D S + PF  F+    L    +T+   +   +F  VLGIVL++F     RL R F +   
Sbjct: 4   DFSRIQPFMPFM----LEGVWVTLQFVSVSLLFGLVLGIVLAIFKISKYRLFRWFAD--- 56

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
                 Y S F   G P ++ + + Y        L QF    G  +S +F + ++A    
Sbjct: 57  -----FYTSIFR--GTPLILQLLMIYL------ALPQF----GVDIS-QFQAAFLAFGLN 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+++EI+R+G+ AV +GQ EAA ALG+ +R     ++LPQAMR+I+P L ++++NL K
Sbjct: 99  SAAYVSEIIRAGIQAVDKGQREAAEALGIPYRPMMLRIILPQAMRNILPALFNEFINLTK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIMIALFMNRLN 389
            S++   +G  DL+        +T   +E +L    IY    + L+++  L   RL 
Sbjct: 159 ESAIVSVIGVTDLMRRAQITSAETYLYLEPLLFVGLIYYVLVMGLTVIGRLLERRLK 215


>gi|163735167|ref|ZP_02142603.1| ABC transporter permease protein [Roseobacter litoralis Och 149]
 gi|161391625|gb|EDQ15958.1| ABC transporter permease protein [Roseobacter litoralis Och 149]
          Length = 225

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 78/130 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +++  I  S  ++AF AE+ R+G++++ RGQ EAA A+G+   +A R ++LPQA++ +IP
Sbjct: 90  YLAAAITFSIQSSAFFAEVFRAGIVSIERGQWEAARAIGMQRPQAMRRIILPQAIKRMIP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             T + + L+K ++L   V +ADL+     +  +T + IEI      IY ++   ++L +
Sbjct: 150 AFTERSIELMKTTTLVATVSYADLLYQANELAQKTFRPIEIFTATALIYFTVIFGLSLCV 209

Query: 386 NRLNAKIALK 395
             L  ++A+ 
Sbjct: 210 QALERRLAVS 219



 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 23/40 (57%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +G ++   RLS  K +AW     +E FR  PPLV +F+ +
Sbjct: 37  LGLMLALSRLSPRKWLAWSAGFVIEFFRTTPPLVQLFWFF 76


>gi|239918350|ref|YP_002957908.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
 gi|281415453|ref|ZP_06247195.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
 gi|239839557|gb|ACS31354.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
          Length = 276

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 4/124 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   +AA+IAE +R+GL AVPRGQMEAA +LG+   +A   +++PQA R ++PPLT++ 
Sbjct: 147 ALGMVSAAYIAETLRAGLQAVPRGQMEAARSLGMPTWRAMVTIVIPQAFRIVLPPLTNEV 206

Query: 332 LNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K+SSL   +G A    +L   G   I+     +  IL+    YL +++ ++L   R
Sbjct: 207 ILLTKDSSLVYVLGLAAHEYELTKFGRDGISALDAGMTPILVAGLFYLVITVPLSLLARR 266

Query: 388 LNAK 391
             A+
Sbjct: 267 FEAR 270


>gi|254456259|ref|ZP_05069688.1| ABC transporter permease component [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083261|gb|EDZ60687.1| ABC transporter permease component [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 243

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+PLL +  ++ +GLP +                       G + SP F+S  IAL+  
Sbjct: 88  RAVPLLVLILWIYYGLPIMT----------------------GISFSP-FVSGIIALAIS 124

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF AEI R+G+ ++ + Q EA  +LGL   K  RLV+LPQA+++I+P + +Q++ +LK
Sbjct: 125 ESAFQAEIFRAGINSIKKAQWEAGSSLGLNFFKRLRLVILPQAIKNILPAIGNQFVYVLK 184

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            SSL   +G  DL      ++  T + +EI    +  YL L ++++ F+ +L   +
Sbjct: 185 MSSLVSIIGIGDLTRKANELVVTTYRPLEIYTFLILEYLVLILIVSFFVRKLEKNL 240


>gi|116491603|ref|YP_811147.1| ABC-type amino acid transport system, permease component
           [Oenococcus oeni PSU-1]
 gi|290891210|ref|ZP_06554272.1| hypothetical protein AWRIB429_1662 [Oenococcus oeni AWRIB429]
 gi|116092328|gb|ABJ57482.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Oenococcus oeni PSU-1]
 gi|290479174|gb|EFD87836.1| hypothetical protein AWRIB429_1662 [Oenococcus oeni AWRIB429]
          Length = 222

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 82/129 (63%), Gaps = 11/129 (8%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP L++I   + ++F  PV+G +         P F +  IA++ + +  +AEI+R GL+A
Sbjct: 70  LPLLLII---FFVYFVLPVIGIY--------LPVFWATVIAMTVFESTMLAEIIRGGLLA 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ E A ++G+T+++A   ++LPQA++ +IPP+ SQ ++L+K++SLAV +  A++  
Sbjct: 119 IPIGQTEGARSVGMTNQQALLNIILPQAIKKMIPPIISQLISLVKDTSLAVGIVLAEMTF 178

Query: 352 VGGTIINQT 360
            G  I  Q 
Sbjct: 179 RGQIIYAQN 187


>gi|319781053|ref|YP_004140529.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166941|gb|ADV10479.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 226

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 109/202 (53%), Gaps = 14/202 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SFVLG+ + L A  L+R F  K   AL   Y+  F   G P LV +   + + +  P 
Sbjct: 28  LLSFVLGLTVGLGAA-LARLFGPKPLVALVRFYVWIFR--GTPLLVQL---FLIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G+T  +A
Sbjct: 82  VG--------ILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R  +LPQA R  +PPL++ +++L+K++SLA A+   ++      I+  T + + + +  
Sbjct: 134 MRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVATTYEPLILYVEA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             +YL+LS +++    RL  ++
Sbjct: 194 AILYLALSSVLSALQTRLETRL 215


>gi|313498370|gb|ADR59736.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 219

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 24/183 (13%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G+  P+L +  F  FGLPT                        G T+S  F +  +AL
Sbjct: 59  EVGRGGPVLILLQFFYFGLPTT-----------------------GLTLS-SFTASILAL 94

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  T ++ +EI+R GL AVP+GQ EAA  LGL+   A R+++LPQ +R  +PPL    L 
Sbjct: 95  AWSTGSYTSEIIRGGLGAVPQGQREAARTLGLSSWDALRIIILPQGLRIALPPLLGFSLV 154

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L+ +SL   +   +LV V   I + T + + ++L+   +Y ++ +   +F+ R    ++
Sbjct: 155 ILQTTSLCFTIALPELVGVANDIGSATFEYMSVLLLTGLMYAAVCVPATIFVGRYEKHLS 214

Query: 394 LKE 396
             E
Sbjct: 215 RYE 217


>gi|291617813|ref|YP_003520555.1| YecS [Pantoea ananatis LMG 20103]
 gi|291152843|gb|ADD77427.1| YecS [Pantoea ananatis LMG 20103]
 gi|327394230|dbj|BAK11652.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Pantoea ananatis AJ13355]
          Length = 222

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLSR +       L  +Y+S F   G P   LIA  + +++  P  
Sbjct: 32  FGLILGFLLALM--RLSRFWPVNW---LARIYVSIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS   AA+ +E +R  + A+ RGQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNMAAYASESLRGAIAAIERGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA R+ +PPL + +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRVVLPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   NRL A +  ++++
Sbjct: 194 LIYWVMATVLSALQNRLEAHVNRQDQE 220



 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    I+G L+   RLS    V W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGALFTLQLSIGGMFFGLILGFLLALMRLSRFWPVNWLARIYVSIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGM 169
           Y  +    + + PIP   I L   M
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLNM 99


>gi|121608947|ref|YP_996754.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553587|gb|ABM57736.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 291

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 97/170 (57%), Gaps = 4/170 (2%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV---SPEFMSLYIALSCYTAAFIAE 283
           +L  G P ++ + L + L    P LG        TV   SP F++  + L     A+ +E
Sbjct: 113 WLFRGTPVILQLLLWFNLALVLPTLGIPGVWEVRTVDVMSP-FLAALLGLGINQGAYTSE 171

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR+GL++V  GQ EAA ++G+    A R V+LPQAMR IIPP+ ++++ ++K +SLA  
Sbjct: 172 VVRAGLLSVDAGQYEAAKSIGMPRMLALRRVILPQAMRVIIPPIGNEFVGMIKLTSLASV 231

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +A+++     I     + IE++++    Y+++  ++AL  +R+ +  A
Sbjct: 232 IQYAEILHNAQNIYYANARVIELLIVAGIWYIAVVTVLALLQSRVESHFA 281



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL--V 143
           A +I  G VNT  ++   M    ++G +    R+S+N ++ W+ R YV +FR  P +  +
Sbjct: 65  AESIRSGLVNTVVMSILAMALGVVLGVVTAVMRVSSNPVLGWVARTYVWLFRGTPVILQL 124

Query: 144 VIFFLYKSVLSVLPIP 159
           +++F    VL  L IP
Sbjct: 125 LLWFNLALVLPTLGIP 140


>gi|156934695|ref|YP_001438611.1| glutamine ABC transporter permease protein [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156532949|gb|ABU77775.1| hypothetical protein ESA_02530 [Cronobacter sakazakii ATCC BAA-894]
          Length = 219

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 113/206 (54%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V   V G+++ L A   +R F       + L++I   +I G P +V +   Y   F  
Sbjct: 25  ISVLGLVGGLIIGLVAG-FARSFGGWIANHIALVFIE--IIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R
Sbjct: 79  PM--AFNDL---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSKR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               IYL ++++++  + RL  ++ +
Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218


>gi|15890700|ref|NP_356372.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158969|gb|AAK89157.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 235

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 70/111 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA+ +E +RSGL +V  GQMEAA ALG ++  A R +++PQ +R+ +PPL + 
Sbjct: 106 VGLGLCQAAYFSEDLRSGLRSVSPGQMEAAKALGHSYLSAMRFIIMPQGVRNALPPLINH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L KNSSLA+ +G ++L      I N + Q  EI L+   +YL  S++I
Sbjct: 166 SVSLFKNSSLALVIGASELTHAVKEIENLSFQTFEIYLVGTVLYLFFSLLI 216


>gi|319405906|emb|CBI79538.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella sp. AR 15-3]
          Length = 250

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 73/115 (63%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +T+A IAE VRSG+ ++P GQ  AA+A+G    ++ R ++LP+A+R+I+PPLTS+ 
Sbjct: 120 ALGFFTSARIAEQVRSGIESIPSGQRYAAMAMGFNTYQSYRYIILPRAIRTIMPPLTSEA 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + ++KNSS+A AV   +L+      I +     E  L+   +Y+ +S+ I + M 
Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLLVTILYIIISLFIFVLMT 234



 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRN 138
           +Y   +L GF NT  L+   +I A  +G ++G  R        N  +  I   +VE+ RN
Sbjct: 28  TYLDTLLDGFKNTAILSIYSLILAIFVGVIIGMIRTLPKTSIINNFLRAIGTFWVEIMRN 87

Query: 139 IPPLVVIFFLYKSVLSVLP 157
           IP LV +F  Y  V  + P
Sbjct: 88  IPLLVQVFLWYFVVPKIYP 106


>gi|289577747|ref|YP_003476374.1| polar amino acid ABC transporter inner membrane subunit
           [Thermoanaerobacter italicus Ab9]
 gi|297544041|ref|YP_003676343.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|289527460|gb|ADD01812.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter italicus Ab9]
 gi|296841816|gb|ADH60332.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 220

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 64/86 (74%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG+TH  A R V++PQA+++I
Sbjct: 86  PAFIAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHTMAMRYVIIPQAIKNI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           +P L ++++ +LK S++   +GFADL
Sbjct: 146 LPALGNEFIVMLKESAIVSVIGFADL 171


>gi|161506742|ref|YP_001576692.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus DPC 4571]
 gi|160347731|gb|ABX26405.1| Glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus DPC 4571]
          Length = 494

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I VFS ++GIVL +     RLS++   K    + + YI    I G P +V I   Y    
Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 352 ---------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484



 Score = 43.5 bits (101), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            VN   + +EK +L +   +L E A +   +      + + YA   + G   T  +    
Sbjct: 249 AVNKTISRVEKEDL-INKKYLPEAAKYM--KTAQKTNTMAKYAPYFVKGIEYTIIITVFS 305

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 306 VLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351


>gi|330719318|ref|ZP_08313918.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc fallax KCTC 3537]
          Length = 482

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLPT++                        T  P F++  I L   
Sbjct: 328 RGLPLMVLAFFIYIGLPTVI-----------------------GTKVPAFLAGIITLVLN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  VR G  AV +GQMEAA +LGL + KA R V++PQ +R ++P   +Q++  LK
Sbjct: 365 EGAYTAAFVRGGFEAVEKGQMEAARSLGLPYGKAMRKVIVPQGLRIMVPSFINQFIITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+  A+G  +L   G  I+ +  Q   +  I   +YL
Sbjct: 425 DTSILSAIGLLELTQTGTLIVARNSQGFRVWAIIAVMYL 463


>gi|229134354|ref|ZP_04263167.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
 gi|228648975|gb|EEL04997.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
          Length = 222

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 33/228 (14%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           SFP L      T+       + SF +GI L++     ++  +      +  +YIS F   
Sbjct: 11  SFPQLFKYVYITLGITVVSMIISFFIGIGLAIITKNKTKFLYP-----IARVYISFFR-- 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEI 284
           G P LV +   + L+F  P            +SP F  L       I LS   AA+++EI
Sbjct: 64  GTPLLVQL---FVLYFGLP-----------QISPAFTVLTAMQATLIGLSLNNAAYLSEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L AV  GQM+A +++G+T  +A R ++ PQA+R  +P   + ++ LLK SSL+ A+
Sbjct: 110 IRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSFGNNFVGLLKESSLSFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G A++++    +  Q+ + +E  L    +Y  ++I+I+    RL  K+
Sbjct: 170 GVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKRLEKKL 217


>gi|251796881|ref|YP_003011612.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247544507|gb|ACT01526.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 216

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 79/125 (63%), Gaps = 1/125 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  + L+ + AA I+EIVRSGL ++P GQ+EAA + GLT+ +    ++LPQ +R ++PP+
Sbjct: 90  SAIVGLAVFEAAMISEIVRSGLSSIPIGQVEAARSSGLTYTQTVWHIVLPQGLRRMVPPI 149

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMN 386
            SQ+++LLK++SLA+ +   +L+     +I Q     + I+ +   +Y +++  ++L   
Sbjct: 150 VSQFISLLKDTSLAIVISLPELMHNSKIVIAQNFDYTLPILALVAVLYFTVNYALSLAAK 209

Query: 387 RLNAK 391
           RL  K
Sbjct: 210 RLENK 214



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ GF  T W+AF  ++ + ++G++ G  R     +V+ I  V VE  RN+P L+++FF 
Sbjct: 15  IMKGFGITLWVAFIAIVLSFVLGSITGTLRYMRIPVVSRILGVIVEFIRNLPLLLILFFT 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|255263034|ref|ZP_05342376.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62]
 gi|255105369|gb|EET48043.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62]
          Length = 293

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D   + +F F G     P  +S  I L+ + AAF+ EIVR+G+ +VP+GQ EAA A+G++
Sbjct: 146 DNAHIWEF-FFGEMRRFPSLISGVIVLAMFEAAFVGEIVRAGIQSVPKGQREAARAIGMS 204

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +++PQAMR ++PP+ +Q+++L+K+SS+   +   +L      ++  T    E 
Sbjct: 205 SFQEMRYIIMPQAMRKVVPPMANQFISLIKDSSIISLISVQELTYKTVELVASTRLIFEA 264

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L     Y  L   +++   RL 
Sbjct: 265 WLTTAAFYFILCFGLSMLFRRLE 287


>gi|330821184|ref|YP_004350046.1| hypothetical protein bgla_2g20990 [Burkholderia gladioli BSR3]
 gi|327373179|gb|AEA64534.1| hypothetical protein bgla_2g20990 [Burkholderia gladioli BSR3]
          Length = 238

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+S  +AA+ AEI+R+G+ AVPRGQ+EAA ALG+      R V+LPQA R ++PP    
Sbjct: 93  VAMSMSSAAYNAEIIRAGIQAVPRGQVEAAQALGMGWPGIHRHVVLPQAARIVLPPYVGN 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++  KN+SLA  +   +L+    TI + T +A+E + I   IYL ++ ++     RL  
Sbjct: 153 FISHTKNTSLASVITVPELMLQAQTIYSSTYRAVETLTIAGAIYLGITTVLTFAQLRLER 212

Query: 391 KIALKEKK 398
             A   + 
Sbjct: 213 SGAAGRRD 220


>gi|261884808|ref|ZP_06008847.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 221

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 72/104 (69%), Gaps = 3/104 (2%)

Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           PVL Q   F F+  +T+S  F +  IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL
Sbjct: 90  PVLLQLMIFAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGL 149

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++  + R ++ PQA+++I+P L +++++L K +S+   +G  DL
Sbjct: 150 SYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDL 193


>gi|152974370|ref|YP_001373887.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152023122|gb|ABS20892.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 214

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 68/94 (72%), Gaps = 3/94 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA I+EIVRSGL+++ +GQ+EA  A GL++ +    ++LPQA+R ++PPL SQ
Sbjct: 93  VALTIFEAAMISEIVRSGLLSIEKGQIEAGRASGLSYIQTLWYIILPQALRRMVPPLVSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++LLK++SLAV +   +L+     IIN  GQ +
Sbjct: 153 FISLLKDTSLAVVISLPELMH-NAQIIN--GQNV 183



 Score = 39.7 bits (91), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT D  +   +L G + T  +A   +  + +IG++VG  R +   +++ I  V VE+ RN
Sbjct: 7   YTGD--HIVFLLKGLLVTLEIAIISIFLSFLIGSIVGTVRYTKIPILSQIFAVIVEIIRN 64

Query: 139 IPPLVVIFFLY 149
           +P L++IFF Y
Sbjct: 65  LPLLLIIFFTY 75


>gi|330430557|gb|AEC21891.1| polar amino acid ABC transporter inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 237

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 73/123 (59%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YT + I E +R+G+ A+PRGQ  A +A+G +  +  R ++LPQ  R I+PPLTS++
Sbjct: 109 ALGIYTGSRICEQLRAGIQALPRGQRNAGLAMGFSLFQTYRHIILPQVFRHILPPLTSEF 168

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L + KNS++A  +G  +L      +++ T Q  E  +I    Y+ ++ +I  FM  +  +
Sbjct: 169 LIISKNSAVASTIGLLELSGQARQLVDYTAQPYESFIIVTLAYVFMNFLILRFMGWIRKR 228

Query: 392 IAL 394
            +L
Sbjct: 229 SSL 231



 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 36/79 (45%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             S+Y   I  GFV TF L     + A  +GT  G  R   +     +   YV +FRNIP
Sbjct: 10  EPSTYLGWITNGFVTTFALTVCAWVLALAVGTFFGILRTLPSTAARAVGTTYVSIFRNIP 69

Query: 141 PLVVIFFLYKSVLSVLPIP 159
            +V  F  Y  V  +LP P
Sbjct: 70  LIVQFFIWYFVVPEILPTP 88


>gi|302541694|ref|ZP_07294036.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302459312|gb|EFL22405.1| glutamate permease [Streptomyces himastatinicus ATCC 53653]
          Length = 214

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 9/113 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL CYT+AFI E VRSG+  VP GQ EAA +LG+T  +    V+LPQA R++IPP+ S 
Sbjct: 89  LALGCYTSAFICEAVRSGINTVPVGQGEAARSLGMTFEQTLGAVVLPQAFRAVIPPVGST 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSIMI 381
            + L KNS++A +    +L+   GT   +N+ G +I    IW F+++++  ++
Sbjct: 149 LIALAKNSAIAGSFSVTELL---GTYKPLNEMGYSI----IWSFVWIAVGYLL 194


>gi|284032615|ref|YP_003382546.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283811908|gb|ADB33747.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 215

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 82/129 (63%), Gaps = 7/129 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +   AL+ YT+AF+ E+VRSG+  +P GQ EAA A+G+T  +   +V+LPQA R+I+P
Sbjct: 86  FWAAVTALTVYTSAFVCEVVRSGINTIPPGQAEAARAVGMTFVQVLTIVVLPQAYRAIVP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIA 382
           P+TS  + LLKN++  +A GF+ L +  G I   + + G++  + L+W+ I   + I+  
Sbjct: 146 PMTSIMIALLKNTT--IAAGFSVLEA--GAIPAAMAERGESQMLTLLWITIGFLILIIPL 201

Query: 383 LFMNRLNAK 391
           +F+ R   +
Sbjct: 202 VFLQRWAER 210


>gi|330429007|gb|AEC20341.1| glutamate/aspartate transport system permease protein [Pusillimonas
           sp. T7-7]
          Length = 196

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 28/207 (13%)

Query: 196 LGIVLSL---FATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LG+VL+L   F  R   L+  F+    +A+PL+ ++ F  F L   VL A+        P
Sbjct: 7   LGVVLALARLFGPRWVSLAAAFYVNLFRAIPLI-LTIFWFFFLVPFVLRAVT-----GNP 60

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             G         V P    +Y ALS +    AA+  EIVR+G+ +V +GQM+AAIALGLT
Sbjct: 61  YAG---------VGP----IYAALSAFVLAEAAYYCEIVRAGINSVRKGQMQAAIALGLT 107

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+LPQA  ++ P L +Q + LLK++SL   +   D +     + ++ G  +E+
Sbjct: 108 RWQALRHVVLPQAFHNMTPSLINQTIALLKDTSLVYVISLNDFLGAATKVAHRDGTLVEM 167

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            L     YL+L       +N L  K A
Sbjct: 168 YLFVAVTYLALCSFGVWLVNILKKKQA 194


>gi|317404418|gb|EFV84835.1| amino acid ABC transporter permease [Achromobacter xylosoxidans
           C54]
          Length = 367

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 16/178 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N R    P LT+  +     F+F +G++L+L      R       KAL ++YI   LI G
Sbjct: 154 NARWGGLP-LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIE--LIRG 205

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P + L+       F   V+       G ++  + +   IA+  + AA+IAE VR GL A
Sbjct: 206 VPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIIMFAAAYIAETVRGGLQA 257

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +P+GQ E A +LGL + +  R ++LPQA++ +IPPL S ++ L K++SL V +G  DL
Sbjct: 258 IPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDL 315


>gi|254477959|ref|ZP_05091344.1| ABC-type glutamine transport system, permease component [Ruegeria
           sp. R11]
 gi|214028544|gb|EEB69380.1| ABC-type glutamine transport system, permease component [Ruegeria
           sp. R11]
          Length = 254

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 109/214 (50%), Gaps = 24/214 (11%)

Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V S VLG++++L         R+    + +  +A+PLL +  ++ +GLP +         
Sbjct: 59  VISIVLGLLVALPGLSEKRGWRIVNRVYVELIRAIPLLPMLFWVFYGLPII--------- 109

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  +G +     F    I L+   +AF AEI R+G+ ++ +GQ EAA  +G
Sbjct: 110 ---------FRSMGLNVPIDPFWGAIITLALSDSAFTAEIYRAGIQSIAKGQREAAQTVG 160

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L++ +  R V+LPQA+R I+PPL +Q++ ++K S+ A  +G  +L      ++    + +
Sbjct: 161 LSYAQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPL 220

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           EI  + +  YL L ++I+  +  L  ++   E+ 
Sbjct: 221 EIYTLLILEYLILVLLISAGVRWLERRMGSDERS 254


>gi|171059367|ref|YP_001791716.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|171060692|ref|YP_001793041.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170776812|gb|ACB34951.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
 gi|170778137|gb|ACB36276.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 221

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 82/131 (62%), Gaps = 6/131 (4%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  +  + + AA+ +EI+R+G+ +VPRGQ+ A  A+G+T+R+  +LV+LPQA R+++P 
Sbjct: 92  LSAIVTFTLFEAAYYSEIMRAGIQSVPRGQVHAGYAVGMTYRQTMQLVVLPQAFRNMLPV 151

Query: 327 LTSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           L +Q + L +++SL  A+G  DL+    V G   N   + +E  L+   +Y  +   +++
Sbjct: 152 LLTQTIILFQDTSLVYAIGAYDLLKGFEVAGKNFN---RPVETYLVAAVVYFVICFGLSM 208

Query: 384 FMNRLNAKIAL 394
            + RL  KIA+
Sbjct: 209 LVRRLQKKIAI 219


>gi|260102147|ref|ZP_05752384.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260084037|gb|EEW68157.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
          Length = 494

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I VFS ++GIVL +     RLS++   K    + + YI    I G P +V I   Y    
Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 352 ---------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            VN   + +EK +L +   +L E A +   +      + + YA   + G   T  +    
Sbjct: 249 AVNKTISRVEKEDL-INKKYLPEAAKYM--KTAQKTNTMAKYAPYFVKGIEYTIIITVFS 305

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 306 VLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351


>gi|289704647|ref|ZP_06501075.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289558601|gb|EFD51864.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 276

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 4/124 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   +AA+IAE +R+GL AVPRGQMEAA +LG+   +A   +++PQA R ++PPLT++ 
Sbjct: 147 ALGMVSAAYIAETLRAGLQAVPRGQMEAARSLGMPTWRAMVTIVIPQAFRIVLPPLTNEV 206

Query: 332 LNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K+SSL   +G A    +L   G   I+     +  IL+    YL +++ ++L   R
Sbjct: 207 ILLTKDSSLVYVLGLAAHEYELTKFGRDGISALDAGMTPILVAGLFYLVITVPLSLLARR 266

Query: 388 LNAK 391
             A+
Sbjct: 267 FEAR 270


>gi|17549155|ref|NP_522495.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17431406|emb|CAD18085.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 233

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 14/151 (9%)

Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290
           H + P L Q  F + G ST+ P            E +   +AL    AA+ +E +RSGL 
Sbjct: 66  HCNVPTLVQLMFWYFGISTLLPLPALDWLGEHHSEVVFAIVALGLCQAAYFSEDLRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA ALG T     R VLLPQA+R+ +P L +  ++L KNSSLA+A+G  ++ 
Sbjct: 126 AIPPGQEEAARALGNTFIGTLRYVLLPQAVRNALPALINHSVSLFKNSSLAMAIGVTEMT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                I N + +A E  L+   +YL  S++I
Sbjct: 186 HAVKEIENASFRAFESYLLATLMYLGFSLVI 216


>gi|157371175|ref|YP_001479164.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322939|gb|ABV42036.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 220

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 10/180 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTA 278
           PL ++S F +       LIA  + +++  P  G +F+          F +  I LS  TA
Sbjct: 50  PLSWLSRFYVSLFRGTPLIAQLFMIYYGLPQFGIEFD---------PFPAALIGLSLNTA 100

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +E +R+ + ++ +GQ EAA ++G+T  +  R V+LPQA R+ +PPL + ++ L+K++
Sbjct: 101 AYTSETLRAAISSIEKGQWEAAASIGMTRWQTLRRVILPQAARTALPPLGNSFIGLVKDT 160

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SLA  +   +L      I ++T +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 161 SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATLLSALQNRLEAHVNRQDQE 220



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G L+   RLS    ++W+ R YV +FR  P +  +F +
Sbjct: 15  LLKGAILTLQLSLGGMALGLMLGFLLALMRLSPLWPLSWLSRFYVSLFRGTPLIAQLFMI 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|224824055|ref|ZP_03697163.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224603474|gb|EEG09649.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 221

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 103/188 (54%), Gaps = 6/188 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R  H +   +   LY++ F    +P L++I+  Y +    P++ Q+     S V P F
Sbjct: 40  LGRLSHHRLLASAAKLYVNYFR--SIPLLLVISWFYLV---VPLVLQWLTGNPSPVGP-F 93

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S  +A   + AA+ AEIVR+G+ ++P+GQ  AA A+G+++ +  RLV+LPQA R + P 
Sbjct: 94  TSCLVAFVMFEAAYFAEIVRAGIQSIPKGQAGAAYAIGMSYGQVMRLVILPQAFRKMTPL 153

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L  Q + L +++SL  AVG  D ++   +  +  GQ  + +L+   +Y   S   +  + 
Sbjct: 154 LLQQSIILFQDTSLVYAVGLMDFLNTARSKGDIIGQPDQFLLLAGAVYFVSSFAASALVK 213

Query: 387 RLNAKIAL 394
           RL  ++A+
Sbjct: 214 RLQQRLAI 221



 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +GTL+  GRLS ++L+A   ++YV  FR+IP L+VI + Y
Sbjct: 34  LGTLIALGRLSHHRLLASAAKLYVNYFRSIPLLLVISWFY 73


>gi|114771230|ref|ZP_01448650.1| ABC-type glutamine transport system, permease component [alpha
           proteobacterium HTCC2255]
 gi|114548155|gb|EAU51042.1| ABC-type glutamine transport system, permease component [alpha
           proteobacterium HTCC2255]
          Length = 252

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 18/182 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PLL +  ++ +GLP +                  F  +G +     F    I L+  
Sbjct: 89  RSIPLLPMLFWVFYGLPII------------------FKSMGLNIPIDPFWGAVITLAIS 130

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF AEI RSG+ ++ +GQ EAA ++GLT+ +  R V+LPQA+R I+PPL +Q++ ++K
Sbjct: 131 DSAFTAEIYRSGIQSIAKGQKEAAHSIGLTYAQTMRYVILPQAIRRILPPLANQFIYIVK 190

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            S+ A  +G  +L      I+    + +EI  + +  YL L ++I+  +  L  ++   E
Sbjct: 191 MSAFASVIGMQELTRRANEIVVTEYRPLEIYSLLILEYLVLVLIISAGVRWLERRMGSNE 250

Query: 397 KK 398
            +
Sbjct: 251 NQ 252


>gi|330429590|gb|AEC20924.1| putative amino acid ABC transporter permease protein [Pusillimonas
           sp. T7-7]
          Length = 365

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 18/179 (10%)

Query: 172 NNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           N+R    P TL + T      F F  G++L+L      R  H    KAL ++YI   LI 
Sbjct: 152 NSRWGGLPLTLILATFGIAVAFPF--GLLLAL-----GRRSHMPAVKALCVVYIE--LIR 202

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P + L+       F   V+       G ++  + +   IA+  + AA++AE VR GL 
Sbjct: 203 GVPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIILFAAAYVAETVRGGLQ 254

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A+P+GQ E A ++GL++ +  R ++LPQA++ +IPPL   +++L K++SL V +G  DL
Sbjct: 255 AIPKGQYEGADSIGLSYWQQMRKIILPQALKVVIPPLVGIFISLFKDTSLVVIIGIFDL 313


>gi|328956327|ref|YP_004373660.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Coriobacterium glomerans PW2]
 gi|328456651|gb|AEB07845.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Coriobacterium glomerans PW2]
          Length = 249

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 111/212 (52%), Gaps = 18/212 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +      S +LG +L +F+T  SR       +A+  +Y+  +    LP  +     
Sbjct: 28  TLAVSVAGLALSMILGTLLGVFSTTRSRAL-----RAISRIYVEFYQNTPLPVQIFF--- 79

Query: 242 YQLHFDKPVLGQFNFIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
             ++   P + Q   +G +T   ++P F    + +  Y AA++AE++R+G+ +VPRGQ+E
Sbjct: 80  --MYMAGPQILQ-AILGAATPVRIAP-FAIGSLGVGLYHAAYVAEVIRTGIESVPRGQLE 135

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +A + G +  +A R ++LPQ  + I+PPL +Q LNL+KN+S+   +   DL+      ++
Sbjct: 136 SARSQGFSRAQAYRYIVLPQTFKMILPPLCNQALNLIKNTSVLALIAGGDLMYQADNFVS 195

Query: 359 QTG---QAIEIILIWMFIYLSLSIMIALFMNR 387
            +G     I    ++  I   L+I++ +  +R
Sbjct: 196 SSGFLQGYIMACALYFLICFPLAILVQVLESR 227



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF  T  ++ +G+  + I+GTL+G    + ++ +  I R+YVE ++N P  V IFF+Y
Sbjct: 24  GFFFTLAVSVAGLALSMILGTLLGVFSTTRSRALRAISRIYVEFYQNTPLPVQIFFMY 81


>gi|169349946|ref|ZP_02866884.1| hypothetical protein CLOSPI_00686 [Clostridium spiroforme DSM 1552]
 gi|169293159|gb|EDS75292.1| hypothetical protein CLOSPI_00686 [Clostridium spiroforme DSM 1552]
          Length = 227

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+S  + A+  E++RSG+  V +GQ EA   LGL+  +  R V+LPQA + I+PPL S+
Sbjct: 102 VAMSINSGAYTTELIRSGINGVDKGQWEACQTLGLSRWQTMRFVILPQAFKRIVPPLVSE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSL   +G  +L++    I NQ  + +    +    YL++++ I+    ++  
Sbjct: 162 FITLIKDSSLISVIGAVELMNSAKVIGNQYYEFMSPYCLAGLYYLAMTLTISYIAKKIER 221

Query: 391 KIALKE 396
           K+A+ +
Sbjct: 222 KLAVSD 227


>gi|153952035|ref|YP_001398237.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939481|gb|ABS44222.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. doylei 269.97]
          Length = 261

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 16/175 (9%)

Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276
           L ++STF   LI G P LV + L Y +  +   LG  N ++ G           I LSC+
Sbjct: 96  LRFLSTFYIELIRGTPLLVQVLLIYYIIANN--LGLDNRYVAG----------VIILSCF 143

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q+ NL+K
Sbjct: 144 SAAYLAEIFRAGILSISISQLESARALGLKEMQIFAYVIFPQALKNILAPLSGQFANLIK 203

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL   +   +L      I + T   +E  +I    YL L++ I++F   L  K
Sbjct: 204 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPISIFSRYLERK 258


>gi|271963749|ref|YP_003337945.1| amino acid ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270506924|gb|ACZ85202.1| ABC-type amino acid transport system permease component-like
           protein [Streptosporangium roseum DSM 43021]
          Length = 312

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 69/99 (69%), Gaps = 1/99 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV+P FM++   L  Y  + +AEIVR+G++++PRGQ EAA+A+GL   +  R++LLPQ
Sbjct: 150 GLTVTP-FMAVVTGLVLYNGSVLAEIVRAGILSIPRGQSEAALAIGLRKGQVMRMILLPQ 208

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
            + +++P + +Q + LLK+++L   V F DL++ G  ++
Sbjct: 209 GVTAMMPAIVAQLVVLLKDTALGFIVSFEDLLNAGARVL 247


>gi|119383822|ref|YP_914878.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373589|gb|ABL69182.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 253

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 6/134 (4%)

Query: 260 STVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
             + P + + + AL+C   YTAA IAE VR+G+ A+P GQ EAA ALGL+   A R +++
Sbjct: 95  KQMPPPWGAFFPALACLGLYTAARIAEQVRAGIEALPAGQDEAAAALGLSPWAARRHIIV 154

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R I+P LTS+ + + KN+S+A+ +G  +L +    I   T Q          IYL 
Sbjct: 155 PQALRLIVPSLTSEVMGIYKNTSVALTIGLLELTAQARQISEATFQTFGAFAAATIIYLL 214

Query: 377 LSIM---IALFMNR 387
           L+++   + L+++R
Sbjct: 215 LALVAYRLMLWIDR 228



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 43/80 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P      Y   +L G + T  LA  G   A  IG LVG GR S N+ VA   R+YVEVFR
Sbjct: 8   PAIDGQLYIQWLLSGLMWTLLLAVGGWWIAFAIGVLVGVGRTSRNRAVALAARLYVEVFR 67

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
           NIP LV +F  Y  +  +LP
Sbjct: 68  NIPVLVQMFLWYFVLPELLP 87


>gi|212712948|ref|ZP_03321076.1| hypothetical protein PROVALCAL_04046 [Providencia alcalifaciens DSM
           30120]
 gi|212684426|gb|EEB43954.1| hypothetical protein PROVALCAL_04046 [Providencia alcalifaciens DSM
           30120]
          Length = 226

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 97/176 (55%), Gaps = 8/176 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSC 275
           PL +++ F +    ++ L+ + +  +   P + Q N +G   +SP+     +S  +A   
Sbjct: 52  PLRWLAAFYVNTFRSVPLVMVLFWFYLVVPNILQ-NVLG---LSPKNDIRLISAVVAFCL 107

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + AA+ +EI+R+G+ ++ +GQ  A++ALG+T  +  RLV+LPQA R+++P L +Q + L 
Sbjct: 108 FEAAYYSEIIRAGIQSISKGQASASLALGMTQMQTMRLVVLPQAFRAMVPLLLTQGIVLF 167

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++SL   +G  D       I  + G  +E+IL    IY   S   ++ +N L  +
Sbjct: 168 QDTSLVYVLGLTDFFRTATNIGERDGTQVEMILFAGLIYFIFSFGASMLVNYLKKR 223



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 39/65 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  +  + ++   + GT++   RLS+ K + W+   YV  FR++P ++V+F+ Y  
Sbjct: 20  GFIITAKITAAAIVVGILWGTVLAVMRLSSIKPLRWLAAFYVNTFRSVPLVMVLFWFYLV 79

Query: 152 VLSVL 156
           V ++L
Sbjct: 80  VPNIL 84


>gi|317487125|ref|ZP_07945928.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316921609|gb|EFV42892.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 339

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 18/158 (11%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG+ L+L      R F  K       +Y+  F    LPT+VL++L   +H+  P +G
Sbjct: 152 AFWLGVFLTLV-----RFFENKVMTGFVKVYVDVFR--ALPTIVLVSL---IHYGAPFIG 201

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            +         P  +S  + L+   +AF +EI+RSG+ AV  GQ+EAA +LGL   K  R
Sbjct: 202 IY--------LPLMVSGILTLTLNHSAFFSEILRSGVSAVGHGQLEAARSLGLGTFKTFR 253

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           L++ PQA ++ +PPLT Q++ LLK + +   VG  +L+
Sbjct: 254 LIVFPQAFKTAMPPLTGQFVALLKETVICSVVGIPELL 291


>gi|262274331|ref|ZP_06052142.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP
           101886]
 gi|262220894|gb|EEY72208.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP
           101886]
          Length = 366

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 77/127 (60%), Gaps = 8/127 (6%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G + S + +   I +  + +A++AE+VR GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 221 FMSGESESNKLVRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMNLII 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----II 367
           LPQA++  IP + + ++ L K++SL + +G  D++ +G    T  N  G A E      +
Sbjct: 281 LPQALKISIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPNWLGFATESYVFVAL 340

Query: 368 LIWMFIY 374
           + W+F +
Sbjct: 341 VFWIFCF 347


>gi|299069325|emb|CBJ40591.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CMR15]
          Length = 233

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 83/151 (54%), Gaps = 14/151 (9%)

Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290
           H + P L Q  F + G ST+ P            E +   +AL    AA+ +E +RSGL 
Sbjct: 66  HCNVPTLVQLMFWYFGISTLLPLPALDWLGEHHSEVVFAIVALGLCQAAYFSEDLRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA ALG T     R VLLPQA+R+ +P L +  ++L KNSSLA+A+G  ++ 
Sbjct: 126 AIPPGQEEAARALGNTFIGTLRYVLLPQAVRNALPALINHSVSLFKNSSLAMAIGVTEMT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                I N + +A E  L+   +YL  S++I
Sbjct: 186 HAVKEIENASFRAFESYLLATLMYLGFSLVI 216


>gi|296111214|ref|YP_003621595.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832745|gb|ADG40626.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 482

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP+++ + +                       P F +  I L   
Sbjct: 328 RGLPLMVLAFFIYIGLPSVIGMKI-----------------------PAFTAGLITLILN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  VR G  AV RGQMEAA +LGL++ K+ R V++PQ ++ +IP   +Q++  LK
Sbjct: 365 EGAYTAAFVRGGFEAVDRGQMEAARSLGLSYSKSMRKVIVPQGLKIMIPSFINQFIITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+  A+G  +L   G  I+++  Q   +  I   IYL
Sbjct: 425 DTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYL 463


>gi|159899278|ref|YP_001545525.1| polar amino acid ABC transporter inner membrane subunit
           [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892317|gb|ABX05397.1| polar amino acid ABC transporter, inner membrane subunit
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 269

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 88/152 (57%), Gaps = 5/152 (3%)

Query: 229 IFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMS-LYIALSCYTAAFIAEIVR 286
           I G+P LVLI   + + F   P L  +  I G  ++    +   IAL    AA+IAEI R
Sbjct: 102 IRGVPILVLI---FTISFAIVPALSDWITINGQKLTVSLTARAIIALVLIYAAYIAEIFR 158

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQMEAA +LG+TH +A R V+LPQA R+++P L +  + +LK+SSL   +G 
Sbjct: 159 AGIESISRGQMEAARSLGMTHGQAMRYVILPQAFRNVLPALGNDLIAILKDSSLVSVLGV 218

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            ++  V    ++ + +  E   I    YL+++
Sbjct: 219 REITQVSRLSVSSSFKYEETYFILTAFYLTMT 250


>gi|326328668|ref|ZP_08195008.1| amino acid ABC transporter, permease protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325953629|gb|EGD45629.1| amino acid ABC transporter, permease protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 298

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 96/168 (57%), Gaps = 3/168 (1%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ G+P LV +   + L +  P L  G  ++     ++P   +  I LS + +A++AEI+
Sbjct: 113 LLRGVPPLVQLIFWFNLAYLVPRLSVGFASWSVNDLITP-LTAAIIGLSLHESAYMAEII 171

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+++V  GQ +AA A+G + R+    V+LPQA+R I+PP  SQ++ LLK +SL   + 
Sbjct: 172 RAGIMSVDSGQRDAARAMGYSGRQTFWKVVLPQALRVIVPPSGSQFIALLKGTSLVSVIT 231

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             DL+     I  +T Q + ++L+ +  YL +  ++ L   R+  ++ 
Sbjct: 232 LTDLLYSVQIIYGRTYQVVPLLLVAVIWYLIVVTLLTLVQRRIERRLG 279


>gi|167564742|ref|ZP_02357658.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia oklahomensis EO147]
 gi|167574722|ref|ZP_02367596.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia oklahomensis C6786]
          Length = 248

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 19/216 (8%)

Query: 185 TNAKIFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALK 241
           T   +F  S VLG +LS+   A R+S H+          LYI   LIF G P L+ + L 
Sbjct: 21  TTLGLFFSSLVLGGLLSIAVVAMRVSPHWLPNR---FARLYI---LIFRGSPLLIQMFLV 74

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQM 297
           Y        LGQF  I  S + P     YI    +L+  TA + AEI+R GL+AVP GQ+
Sbjct: 75  YY------GLGQFGVIRESFMWPMLRDPYICAVLSLALCTAGYTAEIIRGGLMAVPVGQI 128

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  A+GL+     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II
Sbjct: 129 EAGYAIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQII 188

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            QT +  E+ +    IYL L+ +I   +  L  +++
Sbjct: 189 QQTYRTTEVFVCAALIYLGLNFVIVRVLGALEWRLS 224


>gi|166366535|ref|YP_001658808.1| amino acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166088908|dbj|BAG03616.1| amino acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 331

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 25/232 (10%)

Query: 168 GMFLNN---RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           G+FL       LS   LT+       + SF LG++L+L      R       + L + YI
Sbjct: 117 GLFLKAIPLDDLSGLILTLLVAIASMILSFPLGVLLAL-----GRQSELPAIRWLSIGYI 171

Query: 225 STFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIA 282
              L+ GLP L +L   +  L    P          +   PE +   IA  + + AA++A
Sbjct: 172 E--LLRGLPLLGILFMAQVMLPLILP----------AGTRPERVIRAIAGFTLFAAAYLA 219

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR GL A+P+GQ+EAA ALGL       L++LPQA++++IP +  Q+++L K++SL  
Sbjct: 220 ENVRGGLQAIPKGQIEAAKALGLKPIFVLLLIVLPQALKAVIPAIVGQFISLFKDTSLLA 279

Query: 343 AVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            VG  DL+ + G+++      G   E+ L   FIY      ++L   RL  +
Sbjct: 280 IVGLVDLLGMAGSVLANPKFIGDYPEVYLFLAFIYWIFCYSMSLASRRLEQR 331


>gi|33594683|ref|NP_882327.1| putative amino acid ABC transporter permease protein [Bordetella
           pertussis Tohama I]
 gi|33598477|ref|NP_886120.1| putative amino acid ABC transporter permease protein [Bordetella
           parapertussis 12822]
 gi|33603420|ref|NP_890980.1| putative amino acid ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
 gi|33564759|emb|CAE44084.1| putative amino acid ABC transporter permease protein [Bordetella
           pertussis Tohama I]
 gi|33574606|emb|CAE39256.1| putative amino acid ABC transporter permease protein [Bordetella
           parapertussis]
 gi|33577544|emb|CAE34809.1| putative amino acid ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
          Length = 366

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 96/179 (53%), Gaps = 18/179 (10%)

Query: 172 NNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           N R    P TL + T      F F  G++L+L      R       KAL ++YI   LI 
Sbjct: 153 NARWGGLPLTLILATFGIALAFPF--GVLLAL-----GRRSRMPAIKALCVVYIE--LIR 203

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P + L+       F   V+       G ++  + +   IA+  + AA+IAE VR GL 
Sbjct: 204 GVPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIIMFAAAYIAETVRGGLQ 255

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A+P+GQ E A +LGLT+ +  R V+LPQA++ +IPPL S ++ L K++SL V +G  DL
Sbjct: 256 AIPKGQYEGADSLGLTYWQQMRKVILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDL 314


>gi|152974179|ref|YP_001373696.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152022931|gb|ABS20701.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 230

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+++  A R ++LPQA R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQAFRLSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q +   ++    YL L ++   F+N L  
Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNYQQLNTYIVVGIYYLVLVLLFTYFVNLLEK 208

Query: 391 KIALKEKK 398
           +++ K+  
Sbjct: 209 RLSRKQSN 216


>gi|322833420|ref|YP_004213447.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168621|gb|ADW74320.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 231

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/107 (41%), Positives = 68/107 (63%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + EF+    AL    AA+ +E +RSGL A+P GQ EA+ ALG+++ ++ R V+LPQ +R+
Sbjct: 96  NAEFLFSMFALGLCQAAYFSEDIRSGLRAIPEGQTEASRALGMSYTRSLRSVILPQGIRN 155

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            +P L +  + L KN+SLA+ +G A+L  V   I NQT +  E  L+
Sbjct: 156 ALPSLLNHTVLLFKNTSLAMVIGVAELTYVTRDIENQTFRTFESYLV 202



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 6/93 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   I+ G V T  LA    + A  I  L+   RL+  +   +  R YV   RN+P L+
Sbjct: 12  QFGQMIVDGMVVTLKLALGSWLLAMCIALLLVVIRLTHKRAAEYFVRAYVSYHRNVPTLI 71

Query: 144 VIFFLYKSVLSVLP------IPDHSIVLPFGMF 170
            +   Y ++ ++LP      I D +    F MF
Sbjct: 72  QLMMWYFAIPTLLPESVQMWINDFNAEFLFSMF 104


>gi|302187471|ref|ZP_07264144.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 229

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 101/191 (52%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A       +L I + +   R SRH+  +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVTAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF  +  S + P     F    + ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQAVPPG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|300715818|ref|YP_003740621.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299061654|emb|CAX58770.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 324

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 91/170 (53%), Gaps = 16/170 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLH-----------FDKPVLGQFNFIGGSTVSPE 265
           + L  LYI  +   G P LV +   Y +            FD P+   +N      ++P 
Sbjct: 107 RGLSGLYI--WFFRGTPLLVQLIFWYNMSTLFPKITLGIPFDGPIFASWN--TNDLITP- 161

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +    L+   AA++AEI+R+GL +V  GQ+E   A G++  +A R +++PQAMRSIIP
Sbjct: 162 LTAAIAGLALNEAAYMAEIIRAGLQSVDNGQVETTQAFGMSRARALRRIIIPQAMRSIIP 221

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           P  +Q ++++K +SL   +   DL+    ++ N+T + I ++++ +  YL
Sbjct: 222 PTGNQLISMIKATSLVSVIAMGDLLYSVQSVYNRTFEVIPMLMVAVIWYL 271


>gi|302525506|ref|ZP_07277848.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
 gi|302434401|gb|EFL06217.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
          Length = 215

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 30/155 (19%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  +  FL+F  P L ++ + Y                       F +  +AL+ YT+A
Sbjct: 62  PLTLVFAFLVFAYPLLDIVKIDY-----------------------FPTAAVALTIYTSA 98

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FI E+VRSG+  VP GQ EA  ALGL+  +    ++LPQA+RS++PPL S  + LLKN++
Sbjct: 99  FICEVVRSGINTVPLGQAEAGRALGLSSGQILGGIVLPQALRSVVPPLVSMLIALLKNTT 158

Query: 340 LAVAVGFADLVSVGGTI---INQTGQAIEIILIWM 371
             +A GF+  V+  G I   +++ G    I L+W+
Sbjct: 159 --IASGFS--VAEAGAIRQYVSERGDNQMIALLWV 189


>gi|322833910|ref|YP_004213937.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169111|gb|ADW74810.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 327

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 23/176 (13%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYI-------- 271
           LYI  +   G P LV +   Y +   F + VLG           PE+MS           
Sbjct: 115 LYI--WFFRGTPLLVQLLFWYNMSTLFPRVVLG-------VPFGPEYMSWNTNDLITPLT 165

Query: 272 ----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
                L+   AA++AEI+R+GL++V  GQ E A A G++  +A R +++PQAMRSIIPP 
Sbjct: 166 AAIAGLALNEAAYMAEIIRAGLLSVDNGQAETAQAFGMSRGRALRRIIIPQAMRSIIPPT 225

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            +Q ++++K +SL   +   DL+    T+ N+T + + ++++ +  YL ++ ++ L
Sbjct: 226 GNQLISMIKATSLVSVIAMGDLLYSVQTVYNRTFEVVPMLMVAVIWYLFITSLLNL 281


>gi|289705234|ref|ZP_06501633.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289557984|gb|EFD51276.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 305

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 96/164 (58%), Gaps = 5/164 (3%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++   YQL       G      G      + ++  AL+ Y  + IAE+VRSG+ +
Sbjct: 126 VPVLVMMVFFYQLFAQVARTGAIQPQDG-----PYYAVIAALTLYNGSVIAELVRSGVRS 180

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EAA A+G+T  ++ RLV +PQA+ +++P L SQ++ +LK+S+L   +GF +L+ 
Sbjct: 181 LPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLQ 240

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               + +  G  ++ +++   I++ ++ ++     RL+ +++ +
Sbjct: 241 YARQLGSGNGNILQSLVVAAVIFIVINFLLTWAATRLSRRLSSR 284


>gi|328464936|gb|EGF36224.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus MTCC 5463]
          Length = 473

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I VFS ++GIVL +     RLS++   K    + + YI    I G P +V I   Y    
Sbjct: 280 ITVFSVLIGIVLGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 330

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 331 ---------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 381

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 382 LSQAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 441

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 442 LPLFIAMIIYFIMTFTLTRLLN 463



 Score = 43.5 bits (101), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 5/107 (4%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGF-EIDQGIVPYTSDSSYATAILVGFVNTFWLAFS 102
            VN   + +EK +L +   +L E A + +  Q I    + + YA   + G   T  +   
Sbjct: 228 AVNKTISRVEKEDL-INKKYLPEAAKYMKTAQKI---NTMAKYAPYFVKGTEYTIIITVF 283

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 284 SVLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 330


>gi|311109072|ref|YP_003981925.1| general L-amino acid transporter permease AAPM [Achromobacter
           xylosoxidans A8]
 gi|310763761|gb|ADP19210.1| general L-amino acid transport system permease protein AAPM
           [Achromobacter xylosoxidans A8]
          Length = 366

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 97/178 (54%), Gaps = 16/178 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N R    P LT+  +     F+F +G++L+L      R       KAL ++YI   LI G
Sbjct: 153 NARWGGLP-LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIE--LIRG 204

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P   LI+L +      P+     F+       + +   IA+  + AA+IAE VR GL A
Sbjct: 205 VP---LISLLFMSSVMLPL-----FLPEGFSIDKLLRAQIAIIMFAAAYIAETVRGGLQA 256

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +P+GQ E A +LGL + +  R ++LPQA++ +IPPL S ++ L K++SL V +G  DL
Sbjct: 257 IPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDL 314


>gi|229587793|ref|YP_002869912.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359659|emb|CAY46507.1| putative amino acid ABC transport-system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 219

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 10/135 (7%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV +   Y L F  P+     F G S   P F    + LS + A+ + E+VR  L +
Sbjct: 66  IPVLVWL---YLLFFGLPI-----FFGLSI--PSFWCAVLVLSLWGASEVGEVVRGALHS 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EA +++GL+  +    VLLPQA++ + PP  + Y  ++K SSLAV +G  D++ 
Sbjct: 116 LPRGQREAGLSIGLSDPQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIK 175

Query: 352 VGGTIINQTGQAIEI 366
           VG  II +T +++ I
Sbjct: 176 VGQQIIERTYESVLI 190



 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T  ++F  +  +T+ G L G  R   N+L+  + RVY+E+FR IP LV ++ L+
Sbjct: 19  GAAQTLSISFLSIAFSTVGGVLYGVLRTLNNRLINAVLRVYLELFRAIPVLVWLYLLF 76


>gi|303247516|ref|ZP_07333788.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491212|gb|EFL51104.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 269

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 82/133 (61%), Gaps = 4/133 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+ ++  I++S    A++ E+ R+G+ A+P GQ EAA +LG    +    V+LPQA R+I
Sbjct: 135 PDLLAAVISMSVCYGAYMGEVFRAGITAIPIGQTEAARSLGFNRAQTMYHVILPQAWRTI 194

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379
           +PP+ ++++ LLK++SL   +G ADL+  G    +++ +  E    + +I++ I L LS 
Sbjct: 195 LPPVGNEFIALLKDTSLVSILGVADLLRRGREYASESFEYFETFTMVAVIYLIITLILSK 254

Query: 380 MIALFMNRLNAKI 392
           ++++   RL+  +
Sbjct: 255 LVSIMEERLSHHV 267



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 30/46 (65%)

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
           G GR+S NK +  +   YVEV R +P LV +F++Y ++  ++ +PD
Sbjct: 91  GLGRISRNKYINLVASTYVEVVRGVPLLVQLFYIYYALGRMVQVPD 136


>gi|262368884|ref|ZP_06062213.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
 gi|262316562|gb|EEY97600.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
          Length = 247

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 76/127 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +S  I L  +TAA + E VR+G+ A+P GQ+ A  A+G +  +  R V+LPQ+ R+I+P
Sbjct: 111 LISASIGLGLFTAARVCEQVRTGIEALPTGQVNAGYAMGFSTAQLYRYVILPQSFRTILP 170

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL+S+  N +KN+S+A  VG ++++S   TI   T   IEI      I++ +++ +   M
Sbjct: 171 PLSSELTNCVKNTSVASLVGVSEIISQMKTISEYTQNTIEIYTYVTIIFIVINVCLITLM 230

Query: 386 NRLNAKI 392
             L  ++
Sbjct: 231 TLLEKRL 237



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           DS+Y + IL+G    F +A      A ++G+++G  R   NK    I   YV +FRN+P 
Sbjct: 18  DSTYLSWILIGLGWLFVIAIVAWSIAMVLGSILGIMRTLPNKTARSIGTGYVTIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHS 162
           L+ +F  +  V + LP P  S
Sbjct: 78  LIQLFIWFYVVPNFLPGPIKS 98


>gi|257878165|ref|ZP_05657818.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257881051|ref|ZP_05660704.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884712|ref|ZP_05664365.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257889636|ref|ZP_05669289.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257892424|ref|ZP_05672077.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260559212|ref|ZP_05831398.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207745|ref|ZP_05922430.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289565820|ref|ZP_06446262.1| glutamine ABC transporter permease glnP [Enterococcus faecium
           D344SRF]
 gi|293563128|ref|ZP_06677593.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1162]
 gi|294614006|ref|ZP_06693936.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1636]
 gi|294617099|ref|ZP_06696765.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1679]
 gi|294623310|ref|ZP_06702172.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium U0317]
 gi|314939891|ref|ZP_07847097.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943738|ref|ZP_07850477.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314949694|ref|ZP_07853012.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314953240|ref|ZP_07856179.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314993680|ref|ZP_07859028.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314997403|ref|ZP_07862354.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|257812393|gb|EEV41151.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257816709|gb|EEV44037.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257820550|gb|EEV47698.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257825996|gb|EEV52622.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257828803|gb|EEV55410.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260074969|gb|EEW63285.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078128|gb|EEW65834.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289162363|gb|EFD10221.1| glutamine ABC transporter permease glnP [Enterococcus faecium
           D344SRF]
 gi|291593113|gb|EFF24692.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1636]
 gi|291596636|gb|EFF27863.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1679]
 gi|291597278|gb|EFF28467.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium U0317]
 gi|291604906|gb|EFF34375.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1162]
 gi|313588538|gb|EFR67383.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313591854|gb|EFR70699.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313594706|gb|EFR73551.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597601|gb|EFR76446.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640854|gb|EFS05434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313643952|gb|EFS08532.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 218

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 14/166 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +I  LP L++I   Y   F  P +G Q N          F S   AL+ + +A ++EI R
Sbjct: 61  IIRNLPLLLIIFFTY---FALPQIGIQMNI---------FWSAVAALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL AVP+GQMEA ++ GLT+ ++ R ++LPQA +S+IP + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVESMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214


>gi|229031184|ref|ZP_04187194.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
 gi|228730223|gb|EEL81193.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
          Length = 222

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 21/222 (9%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           SFP L      T+       + SFV+GI L++     ++  +      +  +YIS F   
Sbjct: 11  SFPQLFKYVYITLGITLVSMIISFVIGIGLAIVTKNKTKFLYP-----IVRVYISFFR-- 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV +   + L+F  P           TV     +  I LS   AA+++EI+R  L 
Sbjct: 64  GTPLLVQL---FVLYFGLP-----QIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+ A+G A+++
Sbjct: 116 AVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEIL 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 176 AQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217


>gi|126737593|ref|ZP_01753323.1| putative amino acid ABC transporter, permease protein [Roseobacter
           sp. SK209-2-6]
 gi|126720986|gb|EBA17690.1| putative amino acid ABC transporter, permease protein [Roseobacter
           sp. SK209-2-6]
          Length = 253

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V S VLG++++L     SR +      + +  +++PLL +  ++ +GLP +         
Sbjct: 58  VISIVLGLIVALPGLAKSRWWRMVNRVYVELVRSIPLLPMLFWVFYGLPII--------- 108

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  +G +     F    I L+   +AF AEI R+G+ ++ +GQ EAA  +G
Sbjct: 109 ---------FREMGMNVPIDPFWGAIITLALSDSAFTAEIYRAGIQSIAKGQTEAAQTIG 159

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  R V+LPQA+R I+PPL +Q++ ++K S+ A  +G  +L      ++    + +
Sbjct: 160 LNYLQTMRYVILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPL 219

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           EI  + +  YL L ++I+  +  L  ++   E+
Sbjct: 220 EIYSLLILEYLILVLIISAGVRWLERRMGSDER 252


>gi|297162527|gb|ADI12239.1| ABC transporter, permease [Streptomyces bingchenggensis BCW-1]
          Length = 275

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 76/123 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ +  A+IAE++RSGL+AVP GQ +AA  LGLT  +    + LPQA+R I+PPL ++
Sbjct: 133 IGLTLHETAYIAELIRSGLLAVPDGQRQAAATLGLTPGQTFFRITLPQALRVIVPPLGNE 192

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++LLK +SL   +  ADL+     I  +  Q + ++++    Y+ ++ +I L   RL  
Sbjct: 193 LISLLKATSLVSVISLADLLYSVQLIYAKNFQTVPLLIVAAIWYMIITGLITLLQQRLER 252

Query: 391 KIA 393
           +++
Sbjct: 253 RLS 255


>gi|260464193|ref|ZP_05812386.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259029996|gb|EEW31279.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 269

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 73/109 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   +AFI+E+ R+G+ AV +GQ+EAA ALGL+  +  RL++ PQA+R+I+PPL + 
Sbjct: 142 MALTIGYSAFISEVFRAGIQAVEKGQIEAAKALGLSRAQRFRLIVFPQAIRTILPPLGND 201

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           ++ L+K+SSL   +G AD+  +G      + +  E   I  +IYL L++
Sbjct: 202 FVALVKDSSLVSVLGVADITQMGKVYAAGSFRFFETYSITAYIYLILTV 250


>gi|239918033|ref|YP_002957591.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
 gi|239839240|gb|ACS31037.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
          Length = 295

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 96/164 (58%), Gaps = 5/164 (3%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++   YQL       G      G      + ++  AL+ Y  + IAE+VRSG+ +
Sbjct: 116 VPVLVMMVFFYQLFAQVARSGAIQPQDG-----PYYAVIAALTLYNGSVIAELVRSGVRS 170

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EAA A+G+T  ++ RLV +PQA+ +++P L SQ++ +LK+S+L   +GF +L+ 
Sbjct: 171 LPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLH 230

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               + +  G  ++ +++   I++ ++ ++     RL+ +++ +
Sbjct: 231 YARQLGSGNGNILQSLVVAAMIFIVINFLLTWAATRLSRRLSSR 274


>gi|187925333|ref|YP_001896975.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187716527|gb|ACD17751.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 225

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 77/126 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A S + AA+ +EI+R+G+ +V RGQ+ A+ ALG+T+ ++ RL++LPQA R+++P L
Sbjct: 99  SAMVAFSLFEAAYYSEIIRAGIQSVARGQVNASFALGMTYAQSMRLIVLPQAFRAMVPLL 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   +  AD       I ++ G  +E++L     Y  + ++ +  +  
Sbjct: 159 LTQGIVLFQDTSLVYVISLADFFRTATNIGDRDGTNVEMVLFAGACYFVICVVASSLVKG 218

Query: 388 LNAKIA 393
           L  K+A
Sbjct: 219 LQKKVA 224


>gi|293602097|ref|ZP_06684550.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
 gi|292819499|gb|EFF78527.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
          Length = 366

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 19/230 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N R    P LT+  +     F+F +G++L+L      R       KAL ++YI   LI G
Sbjct: 153 NARWGGLP-LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIE--LIRG 204

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P + L+       F   V+       G ++  + +   IA+  + AA+IAE VR GL A
Sbjct: 205 VPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIILFAAAYIAETVRGGLQA 256

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV- 350
           +P+GQ E A +LGL + +  R ++LPQA++ +IPPL S ++ L K++SL V +G  DL  
Sbjct: 257 IPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDLTL 316

Query: 351 --SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 +     G  +E  L    IY      ++ +   L  ++A   K+
Sbjct: 317 AAKAALSDAAWRGFGVEAYLFISAIYFVFCFSMSKYSQALEKRLATDHKR 366


>gi|257440502|ref|ZP_05616257.1| glutamine ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
 gi|257197124|gb|EEU95408.1| glutamine ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
          Length = 254

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 122/235 (51%), Gaps = 22/235 (9%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLL------- 222
           LN+R + +    + T   +   +  LG+VL S+ A     H  ++ G+  P+L       
Sbjct: 34  LNDRWVQYIQ-GVGTTLLVTAIALALGVVLGSVVALVRVAHDQQRPGRRNPVLGFFNAVC 92

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            + T +I G P +V + +   + F       F  +G            +AL   + A+++
Sbjct: 93  QVYTTIIRGTPMMVQLLIMSMVIFSNSR--NFTMVGA-----------LALGINSGAYVS 139

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R GL+AV  GQMEA  +LGL +     ++++PQA+R+++P L ++++ LLK++SL  
Sbjct: 140 EIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIVIPQAIRAVLPALGNEFIVLLKDTSLIT 199

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  +L+     I+N+T +A+  +L    +YL L ++    +++   ++A  ++
Sbjct: 200 VIGGKELLYAAQGIMNRTYEAMFPLLGVAVVYLILVMLFTWLLSKFERRMAQGDR 254


>gi|239826927|ref|YP_002949551.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. WCH70]
 gi|239807220|gb|ACS24285.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. WCH70]
          Length = 216

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 27/180 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T + LPLL I  F  F LP +        L  DK                 F +  +AL
Sbjct: 60  ETIRNLPLLLIIFFTYFALPEV-------GLKLDK-----------------FYAAIVAL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             + +A ++EIVRSGL ++ +GQ+EAA + GLT+ +    ++LPQA+R ++PP+ SQ+++
Sbjct: 96  VVFESAMLSEIVRSGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LLK++SLA+ +   +L++    IIN       I I ++   +Y  ++  ++L   RL  +
Sbjct: 156 LLKDTSLAIVISLPELMN-HAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYR 214


>gi|187927462|ref|YP_001897949.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|241661992|ref|YP_002980352.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|309779836|ref|ZP_07674591.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia
           sp. 5_7_47FAA]
 gi|187724352|gb|ACD25517.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|240864019|gb|ACS61680.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|308921413|gb|EFP67055.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia
           sp. 5_7_47FAA]
          Length = 227

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 76/125 (60%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      +D  +    I  + G+ +E++L     Y  +    ++ + R
Sbjct: 161 LTQAIVLFQDTSLVYVSALSDFFTQAYNIGERDGRIVELLLFAGLCYFVICFGASVLVKR 220

Query: 388 LNAKI 392
           L  K+
Sbjct: 221 LQKKV 225


>gi|159037030|ref|YP_001536283.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora arenicola CNS-205]
 gi|157915865|gb|ABV97292.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora arenicola CNS-205]
          Length = 325

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 21/237 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYIS 225
           FG+     G+ F   T+       + S V+G +L++   +L      + TG + PL Y  
Sbjct: 65  FGLVWERLGIGFKN-TLTAAVLAILTSLVVGTLLAVLRIQLKGLAQRRYTGLSAPLAY-- 121

Query: 226 TFLIFGLPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEF-------MSLYIALSCY 276
             L+ GL   + +  ++ +   +  PV+    F+      PEF         L I L+ Y
Sbjct: 122 --LLRGLNLTLSVVTRFCVEVFRGLPVVITIFFVARGF--PEFGVTFDTLWYLVIGLTIY 177

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +  IAEI+RSG+  +P GQ EAA A+GL+  + TR+++LPQA R ++P L SQ + +LK
Sbjct: 178 NSVVIAEILRSGMEGLPGGQAEAAAAIGLSPLQTTRMIMLPQAFRIMLPALISQLVVVLK 237

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI--ILIWMFIYL--SLSIMIALFMNRLN 389
           ++SL   + + + +++G  II      I++  +L  +FI +  SLS +     NRL+
Sbjct: 238 DTSLGFIISYEETLNIGKQIIGVLDNPIQVYTVLAVLFIVVNYSLSKLAQAVQNRLS 294


>gi|260578024|ref|ZP_05845947.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Corynebacterium
           jeikeium ATCC 43734]
 gi|258603851|gb|EEW17105.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Corynebacterium
           jeikeium ATCC 43734]
          Length = 315

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 78/126 (61%), Gaps = 4/126 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L    AA++AEIVR+G+ AVP GQ EA+ ALG+T  +  R  ++PQAMR IIP
Sbjct: 152 FILAVLGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWGQNMRRTVMPQAMRIIIP 211

Query: 326 PLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381
           P  +++++LLK +SL +AV + A+L      I N   Q + ++L+   W  +  S+ +++
Sbjct: 212 PTGNEFISLLKTTSLVIAVPYTAELYGRATDISNSLFQPVPLLLVAATWYLVITSILMVV 271

Query: 382 ALFMNR 387
             ++ R
Sbjct: 272 QFYVER 277


>gi|302524786|ref|ZP_07277128.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
 gi|302433681|gb|EFL05497.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
          Length = 297

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 17/205 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + VLG++++L   RLS +      K     YI  +L  GLP L+ I + Y L    P + 
Sbjct: 72  AIVLGVLIALL--RLSAN---PVAKWFAAAYI--WLFRGLPVLLQILIWYNLALIFPTVS 124

Query: 253 -QFNFIGGSTVSP------EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
               F G     P       F +  + L+   +A++AEIVR+GL +V  GQ EAA ++G+
Sbjct: 125 IPLPFCGYLVHEPTNVLISAFTAALLGLALNESAYMAEIVRAGLTSVDAGQTEAAKSIGM 184

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T     R V+LPQAMR IIPP  + ++N+LK +S+A  +G  +L+     I +     +E
Sbjct: 185 TPGATLRRVVLPQAMRVIIPPTGNDFINMLKGTSMASVIGVTELIHAANNISSNNLLVME 244

Query: 366 IIL---IWMFIYLSLSIMIALFMNR 387
            ++   IW  + ++++ +   ++ R
Sbjct: 245 TLIAAAIWYMVVVTVAGIGQHYLER 269



 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 69  GFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           GF + Q  + + S  D  +   + +G +NT  LA      A ++G L+   RLSAN +  
Sbjct: 32  GFALAQAQIEWGSVPDFVFYRVMALGLLNTVVLAVIAQAIAIVLGVLIALLRLSANPVAK 91

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           W    Y+ +FR +P L+ I   Y   L     P  SI LPF  +L
Sbjct: 92  WFAAAYIWLFRGLPVLLQILIWYNLALI---FPTVSIPLPFCGYL 133


>gi|227823732|ref|YP_002827705.1| putative amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Sinorhizobium fredii NGR234]
 gi|227342734|gb|ACP26952.1| putative amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Sinorhizobium fredii NGR234]
          Length = 273

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 38/211 (18%)

Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIAL 240
           F  + +LG+ ++L A  LS H        F+ +  + +P+L +  ++ F G P LV+   
Sbjct: 61  FALATLLGLGVALMA--LSEHPALRQIARFYTEVIRGVPILVLLFYIAFVGAPALVV--- 115

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMS------------LYIALSCYTAAFIAEIVRSG 288
                         NF+    ++  FM               IAL    +AFIAE+ R+G
Sbjct: 116 ------------AVNFLAAPLITWGFMEPLVVRDISLMWRAIIALMIGYSAFIAEVFRAG 163

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V +GQ+EAA  LGLT  +  RLV+ PQA+R I+PPL + ++ ++K+SSL   +G AD
Sbjct: 164 IQSVDKGQVEAAKTLGLTRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVAD 223

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +  +G    + + +  E   I  ++YL L+I
Sbjct: 224 ITQMGKVYASGSFRFFETYSIVAYVYLILTI 254


>gi|295399080|ref|ZP_06809062.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110316|ref|YP_003988632.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|294978546|gb|EFG54142.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215417|gb|ADP74021.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 233

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 109/217 (50%), Gaps = 37/217 (17%)

Query: 188 KIFVFS----FVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTL 235
           KI +F+    F LG+VL+L   ++ R          +    +  PL+     + FG+P L
Sbjct: 38  KIVIFAVLLGFALGVVLALM--KIGRIKVLAWFADAYTSVFRGTPLVLQLVLIYFGIPQL 95

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                                  G  + P F S  IA    +AA+++EI+R+G++A+ +G
Sbjct: 96  T----------------------GVDIGP-FPSAVIAFGLNSAAYVSEIIRAGILAIDKG 132

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA+ALG+ ++   R ++LPQA+++I+P L ++++ L K S++   +G  D++     
Sbjct: 133 QREAALALGIPYKLMMRDIILPQALKNILPALMNEFITLTKESAVVTVIGAMDVMRRAYI 192

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  Q  + IE +LI   IY  L +++ L    L  ++
Sbjct: 193 VGGQVYRYIEPLLIAGLIYYVLVMLLTLLGKALEGRL 229


>gi|209809241|ref|YP_002264779.1| binding-protein-dependent transport system inner membrane component
           [Aliivibrio salmonicida LFI1238]
 gi|208010803|emb|CAQ81200.1| binding-protein-dependent transport system inner membrane component
           [Aliivibrio salmonicida LFI1238]
          Length = 264

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/190 (32%), Positives = 100/190 (52%), Gaps = 20/190 (10%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           T L R      G++L   YI   LI   P LV I L Y             F+ G  +  
Sbjct: 87  TALLRLSDSVVGRSLAKGYIE--LIRNTPLLVQIYLLY-------------FVFGPYLGL 131

Query: 265 E-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           E F +  +AL+ +  A+ AEI+RSGL+ +P+GQ EA  +LGL+   + R ++LPQ ++  
Sbjct: 132 ERFSTAILALALFQGAYTAEILRSGLVNLPKGQFEACRSLGLSSFNSYRYIILPQVIQKT 191

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSI 379
           +P LT++ ++L+KNSS+   +   DL + G  I+  T    EI      I++ + LSLS 
Sbjct: 192 LPSLTNELVSLVKNSSIVSVMAIFDLTTEGRNIVADTAMPFEIWFSVAAIYLLVTLSLSG 251

Query: 380 MIALFMNRLN 389
           + A   ++++
Sbjct: 252 LSAWLEHKMH 261


>gi|241206764|ref|YP_002977860.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860654|gb|ACS58321.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 270

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 111/211 (52%), Gaps = 22/211 (10%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FV + VLG+ + L     S+   +     +   YI   +I G+P LVL  L Y      P
Sbjct: 61  FVLATVLGLGICLLGMADSQVLRQ-----IARFYIE--IIRGIPILVL--LFYVAFVGAP 111

Query: 250 VL-GQFNFIGGSTVSPEF--------MSLY----IALSCYTAAFIAEIVRSGLIAVPRGQ 296
            L   +NF+    V+           +SL     IAL+   ++FIAEI R+G  +V  GQ
Sbjct: 112 ALVAAYNFLISPLVTSGMAEPILVRDLSLMWRAIIALTVGYSSFIAEIFRAGFQSVDLGQ 171

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALGL+  +  R V+ PQA+R I PPL++ +++++K+SSL   +G AD+  +G   
Sbjct: 172 IEAAKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVY 231

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
              + +  E   I  +IYL L+I ++L + R
Sbjct: 232 AAGSFRFFETYSIVTYIYLILTIGLSLALRR 262


>gi|188591218|ref|YP_001795818.1| glutamate/aspartate transporter; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|170938112|emb|CAP63098.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 227

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 77/127 (60%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM AA ALG+T+ ++ RLV+LPQA R+++P L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAQALGMTYGQSMRLVILPQAFRNMVPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      AD       I  + G+ +E++L    +Y  +    +L + R
Sbjct: 161 LTQGIILFQDTSLVYVSALADFFGQAYGIGERDGRIVEMLLFAGLVYFIICFSASLLVKR 220

Query: 388 LNAKIAL 394
              K+A+
Sbjct: 221 YQKKVAV 227


>gi|116254281|ref|YP_770119.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258929|emb|CAK10038.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 270

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 111/211 (52%), Gaps = 22/211 (10%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FV + VLG+ + L     S+   +     +   YI   +I G+P LVL  L Y      P
Sbjct: 61  FVLATVLGLGICLLGMADSQVLRQ-----IARFYIE--IIRGIPILVL--LFYVAFVGAP 111

Query: 250 VL-GQFNFIGGSTVSPEF--------MSLY----IALSCYTAAFIAEIVRSGLIAVPRGQ 296
            L   +NF+    V+           +SL     IAL+   ++FIAEI R+G  +V  GQ
Sbjct: 112 ALVAAYNFLISPLVTSGMAEPILVRDLSLMWRAIIALTVGYSSFIAEIFRAGFQSVDLGQ 171

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALGL+  +  R V+ PQA+R I PPL++ +++++K+SSL   +G AD+  +G   
Sbjct: 172 IEAAKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVY 231

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
              + +  E   I  +IYL L+I ++L + R
Sbjct: 232 AAGSFRFFETYSIVTYIYLILTIGLSLALRR 262


>gi|319940826|ref|ZP_08015165.1| glutamate/aspartate transport system permease gltJ [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805708|gb|EFW02489.1| glutamate/aspartate transport system permease gltJ [Sutterella
           wadsworthensis 3_1_45B]
          Length = 244

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 23/205 (11%)

Query: 190 FVFSFVLGIVLSLFAT---RLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F+ + VLGI++    T   ++ R   E   +  + +PL+       F +P ++     + 
Sbjct: 40  FLLALVLGIIVGTLRTSPIKIVRGACEAWIELFRNIPLIVQIFIWYFVVPEIIPWYKDWM 99

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  D P + QF            M+ +I +  +T++ IAE VR+G+ ++PRG   AA AL
Sbjct: 100 IEAD-PAIAQF------------MTAFICMGFFTSSRIAEQVRAGIASIPRGLPNAAKAL 146

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +    V+LP AMR I+PPLTS+ +NL+KN+++A+ +G  +L      +   T Q 
Sbjct: 147 GFTTVETYVYVILPMAMRLIVPPLTSEAMNLVKNTAVAMTIGLPELTMRANEMGENTFQF 206

Query: 364 IEIILIWMFIYLSLSIMIALFMNRL 388
               L W  I   L I+IAL +NR+
Sbjct: 207 FAAYL-WATI---LYIVIALVVNRV 227



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 42/77 (54%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           SD  +   IL G   T  LA S  + A ++G +VG  R S  K+V   C  ++E+FRNIP
Sbjct: 17  SDDPWWRYILDGAGWTVGLAVSAFLLALVLGIIVGTLRTSPIKIVRGACEAWIELFRNIP 76

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V IF  Y  V  ++P
Sbjct: 77  LIVQIFIWYFVVPEIIP 93


>gi|87121082|ref|ZP_01076973.1| amino acid ABC transporter, permease protein [Marinomonas sp.
           MED121]
 gi|86163574|gb|EAQ64848.1| amino acid ABC transporter, permease protein [Marinomonas sp.
           MED121]
          Length = 366

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 24/214 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SF LG++L+L      R       K++ +++I T     L T++ +A    +    P 
Sbjct: 170 VASFPLGVLLAL-----GRQSSMPIAKSVCIVFIETIRAVPLITILFMA-SVMIPLFLPD 223

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FN         + M + I ++ ++AA++AE++R GL A+P+GQ EAA A+GLT+ ++
Sbjct: 224 GMNFN---------KLMRVLIGITLFSAAYMAEVIRGGLQAIPKGQYEAADAMGLTYWQS 274

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT------GQAI 364
             LV+LPQA++ +IP + + ++ L K+++L   VG  DL+   G I   T      G  I
Sbjct: 275 MVLVILPQALKLVIPGIVNTFIGLFKDTTLVYIVGMFDLL---GRIQAATHDSSWLGTTI 331

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E      FIY +    ++ +  R+  K+    K+
Sbjct: 332 EGYAFAGFIYWAACFGMSRYSMRIERKLETGHKR 365


>gi|302391067|ref|YP_003826887.1| amino acid ABC transporter membrane protein [Acetohalobium
           arabaticum DSM 5501]
 gi|302203144|gb|ADL11822.1| amino acid ABC transporter membrane protein, PAAT family
           [Acetohalobium arabaticum DSM 5501]
          Length = 217

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 97/175 (55%), Gaps = 13/175 (7%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P LV +   + L++  P LG         ++P +++  + L   + A++ 
Sbjct: 55  YIEIFR--GTPLLVQL---FILYYGLPSLG-------INLTP-YIAAVLGLGLNSGAYVG 101

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ ++ +GQMEAA ++G+++ ++ R ++LPQA +SI+P L ++++ LLK+SSL  
Sbjct: 102 EIVRGGIESIDKGQMEAARSVGMSYAQSMRYIILPQAFKSIVPALGNEFIALLKDSSLVS 161

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   DL   G  II++T Q+  I L     Y  +  ++   +N    K+   ++
Sbjct: 162 VIAVKDLTRQGRLIISRTYQSFFIFLTVAVFYFIMVFIMTRLVNYAERKLKTSDQ 216



 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 27/41 (65%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+G ++G  R+S N ++  + + Y+E+FR  P LV +F LY
Sbjct: 32  ILGNVLGLARVSKNPIIGGVAKGYIEIFRGTPLLVQLFILY 72


>gi|258425045|ref|ZP_05687916.1| transport system membrane protein [Staphylococcus aureus A9635]
 gi|282909732|ref|ZP_06317541.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282911978|ref|ZP_06319774.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|257844879|gb|EEV68922.1| transport system membrane protein [Staphylococcus aureus A9635]
 gi|282323674|gb|EFB53990.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282326306|gb|EFB56610.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Staphylococcus aureus subsp. aureus WW2703/97]
          Length = 242

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 98/155 (63%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V +   + + +  
Sbjct: 37  ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQL---FIIFYGI 90

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 91  PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 149

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           T+R+  + ++LPQA+R  IP L + +L+L+K++SL
Sbjct: 150 TYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 184


>gi|296274225|ref|YP_003656856.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098399|gb|ADG94349.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 321

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 14/179 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L  +Y++  ++ G P LV I L Y +     V   F F         F++  ++L  +
Sbjct: 153 KDLATVYVT--IVRGTPLLVQIFLFYFI-----VANIFEF-------DRFVAGVLSLGIF 198

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEI+R  + ++ +GQ+EA+ +LG+++ +A R ++LPQA +  +P L  + + L+K
Sbjct: 199 FGAYMAEILRGAIQSIDKGQLEASKSLGISNFQAMRYIILPQAFKRALPTLIGEMIALVK 258

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SSL   +   DL  VG  I+  T    E  +I   +YL ++ +++   +R+  K+ LK
Sbjct: 259 DSSLVSVISITDLTKVGKEIVANTFSPFETWIIVALLYLCITSVLSFIGHRIEKKMTLK 317


>gi|113866503|ref|YP_724992.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525279|emb|CAJ91624.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 227

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 77/127 (60%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +A + + AA+ +EI+R+G+ +V RGQM AA ALG+T+ ++ RLV+LPQA R+++P L
Sbjct: 101 SALVAFALFEAAYYSEIIRAGIQSVSRGQMFAAQALGMTYGQSMRLVILPQAFRNMVPLL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL      AD       I  + G+ +E++L    +Y  +    +L + R
Sbjct: 161 LTQGIILFQDTSLVYVSALADFFGQAYGIGERDGRIVEMLLFAGVVYFVICFSASLLVKR 220

Query: 388 LNAKIAL 394
              K+A+
Sbjct: 221 YQKKVAV 227


>gi|281355806|ref|ZP_06242300.1| polar amino acid ABC transporter, inner membrane subunit
           [Victivallis vadensis ATCC BAA-548]
 gi|281318686|gb|EFB02706.1| polar amino acid ABC transporter, inner membrane subunit
           [Victivallis vadensis ATCC BAA-548]
          Length = 239

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 108/205 (52%), Gaps = 16/205 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVL 251
           +LG++L  F   + R  H+KTGK   L ++      +I G P +V + + Y + F     
Sbjct: 48  LLGVLLG-FTVAVIRSTHDKTGKLRLLNWLCKLYLTVIRGTPVVVQLLIIYFVIF----- 101

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  GS    + +   +A    + A++AEI+R G++++ +GQ EA  +LGL++ +  
Sbjct: 102 -------GSVNISKILVAIVAFGVNSGAYVAEIIRGGIMSIDKGQFEAGRSLGLSYIQTM 154

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQA ++++P L ++++ LLK +S++  +   DL   G  I +QT  A   ++   
Sbjct: 155 IYIILPQAFKNVLPALGNEFIVLLKETSVSGYIALQDLTKGGDIIRSQTYTAFMPLIAVA 214

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            IYL++ +  +  + +L  ++   E
Sbjct: 215 LIYLAVVMQFSWLLGKLERRLKNNE 239


>gi|323525257|ref|YP_004227410.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382259|gb|ADX54350.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 245

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)

Query: 264 PEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           P+F+ +  ++L  YT + I E VR+G+ A P GQ  AA ALGLT  +A R VLLP   R+
Sbjct: 108 PQFLLASVVSLGVYTGSRICEQVRAGISARPVGQFHAAFALGLTRTQAYRYVLLPVTFRT 167

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+ PLTS++L + KNS++A  +G  +L      +++ T Q  E  +     Y+ L+  I 
Sbjct: 168 ILGPLTSEFLIISKNSAVASTIGLLELSGQARQLVDYTAQPYESFICVTLAYMGLNFAIL 227

Query: 383 LFMNRLNAKIAL 394
             M  +  + AL
Sbjct: 228 RGMGWVRRRTAL 239


>gi|257056748|ref|YP_003134580.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586620|gb|ACU97753.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 215

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 71/109 (65%), Gaps = 7/109 (6%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL+ YTAAF+ E+VRSG+  VP GQ EAA A+GLT  +    ++LPQA RS++P
Sbjct: 85  FWAAVVALTMYTAAFVCEVVRSGINTVPVGQAEAARAIGLTFGQTLSHIVLPQATRSVVP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILIWM 371
           P+ S  + LLKN++  +A GF+  V   G I N   + G ++ + L+W+
Sbjct: 145 PMVSTMIALLKNTT--IAAGFS--VVEAGAIQNYLSERGYSVLVGLLWV 189


>gi|311898347|dbj|BAJ30755.1| putative ABC transporter ATP-binding protein [Kitasatospora setae
           KM-6054]
          Length = 337

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 117/221 (52%), Gaps = 17/221 (7%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            A +    F LG +L++   RLS +   ++     L +   +L    P LV + L Y + 
Sbjct: 100 TAAVVALGFALGTLLAV--ARLSDNPVLQS-----LSWGFVWLFRATPLLVQLLLWYNIG 152

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLY-------IALSCYTAAFIAEIVRSGLIAVPRGQME 298
              P L      GG   S + ++L        I L+ + AAF AE+VRSG+++V +GQ+E
Sbjct: 153 ALYPTLSLSLPFGGELFSVKTVNLLGPVLTTLIGLTLHEAAFAAEVVRSGVLSVDQGQLE 212

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LGL   +  R ++LPQAMR+I+PP  +  +  LK +++   +   DL+     I N
Sbjct: 213 AASSLGLGRARVLRRIVLPQAMRAILPPAGNMLIGTLKGTAVISVLAVHDLLFSVQVIYN 272

Query: 359 QTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKIALKE 396
           QT Q I ++L+    Y++++ ++++   ++ R  A+ A +E
Sbjct: 273 QTYQVIPLLLVATLWYVAVTSVLSVGQYYLERYFARGATRE 313


>gi|153855009|ref|ZP_01996222.1| hypothetical protein DORLON_02228 [Dorea longicatena DSM 13814]
 gi|149752506|gb|EDM62437.1| hypothetical protein DORLON_02228 [Dorea longicatena DSM 13814]
          Length = 229

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 120/228 (52%), Gaps = 24/228 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224
           F+++    + T  +     + VF+ ++G+VL  F   + R  H+KTGK     A+  +Y+
Sbjct: 12  FIDDNRWRYITDGLKITLLVTVFAVLIGVVLG-FLIAIVRTTHDKTGKLKILNAICKVYL 70

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P +V + + Y + F            GS    + +   +A    + A++AEI
Sbjct: 71  T--VIRGTPVVVQLMIIYFIIF------------GSVDISKVVVAIVAFGINSGAYVAEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG++++  GQ EA  +LG  + +    +++PQA ++++P L +++++LLK +S++  +
Sbjct: 117 FRSGIMSIDNGQFEAGRSLGFNYAQTMMYIVMPQAFKNVLPTLCNEFISLLKETSVSGYI 176

Query: 345 GFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRL 388
              DL   G  I ++T  A    I + LI++ + +  + +++L   RL
Sbjct: 177 ALQDLTKGGDIIRSRTYDAFMPLIAVALIYLAMVMIFTKLVSLLERRL 224


>gi|197118314|ref|YP_002138741.1| amino acid ABC transporter membrane protein [Geobacter bemidjiensis
           Bem]
 gi|197087674|gb|ACH38945.1| amino acid ABC transporter, membrane protein [Geobacter
           bemidjiensis Bem]
          Length = 272

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 19/201 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + +L IV  LF T L R    +       LY+   +I G+P LV      Q+ +    LG
Sbjct: 84  AILLAIVFGLF-TGLGRISKNRFLNGAASLYVE--IIRGIPLLV------QIFYIYYALG 134

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  +      P  +S  IA++    A++ E+VR+G+ ++ +GQ EAA++LG+  R+   
Sbjct: 135 RFVQV------PPILSAIIAMAVCYGAYMGEVVRAGIESIHKGQREAALSLGMNGRQTMI 188

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IIL 368
            V+LPQA++ I+PP+ ++++ LLK+SSL   +  ADL+  G    +++    E    I L
Sbjct: 189 HVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADLLRRGREFASESFTYFETYTVIAL 248

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
           I++ I L  S +I +   R++
Sbjct: 249 IYLIITLFFSKIIGVMEERVS 269



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++ A + G   G GR+S N+ +     +YVE+ R IP LV IF++Y +
Sbjct: 73  GILVTFQVTLGAILLAIVFGLFTGLGRISKNRFLNGAASLYVEIIRGIPLLVQIFYIYYA 132

Query: 152 VLSVLPIP 159
           +   + +P
Sbjct: 133 LGRFVQVP 140


>gi|329939957|ref|ZP_08289239.1| glutamate uptake system protein [Streptomyces griseoaurantiacus
           M045]
 gi|329300783|gb|EGG44679.1| glutamate uptake system protein [Streptomyces griseoaurantiacus
           M045]
          Length = 228

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 75/126 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS YTAAF+ E +RSG+  VP GQ EAA ALGL+  +  R+++LPQA R+ I PL + 
Sbjct: 103 LGLSAYTAAFVCEALRSGINTVPMGQAEAARALGLSFTQVLRMIVLPQAFRAAIVPLANV 162

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KN+++A A+G  +   +   +I      + I  I+   ++ L++ + L +  L  
Sbjct: 163 LIALTKNTTVAAAIGVGEAALLMKEMIENEAATVLIAFIFALGFVVLTLPMGLILGWLGK 222

Query: 391 KIALKE 396
           ++A+K 
Sbjct: 223 RLAVKR 228


>gi|315641120|ref|ZP_07896199.1| glutamine ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus italicus DSM
           15952]
 gi|315483128|gb|EFU73645.1| glutamine ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus italicus DSM
           15952]
          Length = 722

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 29/192 (15%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V+G++  L       A R+    +    + +P++ ++ F+ FGL     I +   
Sbjct: 536 FALALVVGVIFGLMSVAPIKAVRIVASIYVDIIRGIPMMVLAFFIFFGLSGATGITI--- 592

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                               P+F +  I L+   +A+IAEIVR G+ AVP GQMEA+ +L
Sbjct: 593 --------------------PDFAAGIITLTLNASAYIAEIVRGGINAVPVGQMEASRSL 632

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+  G  I+  T Q+
Sbjct: 633 GLSYGRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQTGKIIVASTLQS 692

Query: 364 IEIILIWMFIYL 375
             +  I   +YL
Sbjct: 693 TYVYFIIAVMYL 704


>gi|227529156|ref|ZP_03959205.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227351000|gb|EEJ41291.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 501

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 22/193 (11%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F F+LG + +L   RLS++   K    + + YI    + G P +V I   Y         
Sbjct: 315 FGFILGTLFALM--RLSKN---KLLHTIAVCYIE--FLRGTPMMVQIMFVY--------- 358

Query: 252 GQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F  G+ +   P  ++  IA+S  + A++AEI+RSG+ ++P GQ EAA +LG+   K
Sbjct: 359 ----FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMDKNK 414

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V++PQA+++I P L ++ + LLK+SSL   +G  +L+     + + T + +  + I
Sbjct: 415 AFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVTELMFQTQLVQSATYKGVLPLFI 474

Query: 370 WMFIYLSLSIMIA 382
            M IY  L+  ++
Sbjct: 475 TMMIYFILTFTLS 487



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+GTL    RLS NKL+  I   Y+E  R  P +V I F+Y
Sbjct: 318 ILGTLFALMRLSKNKLLHTIAVCYIEFLRGTPMMVQIMFVY 358


>gi|254421401|ref|ZP_05035119.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196188890|gb|EDX83854.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 216

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 1/139 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  +SP  ++  IAL+ YT+AF+ +I R  + AVPRGQ +AA A+G  +    RL++L
Sbjct: 79  VTGINLSP-LVAAAIALTAYTSAFLGDIWRGSIQAVPRGQWQAASAIGFGYFDQLRLIIL 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R  I P     + ++K +SLA  +GF +L      I N T Q++ I  +   IY +
Sbjct: 138 PQAVRLAIAPTVGFLVQVIKGTSLASIIGFTELSRAASLINNVTLQSLLIFGLAGLIYFA 197

Query: 377 LSIMIALFMNRLNAKIALK 395
           L   ++ +  RL  K+A K
Sbjct: 198 LCYPLSTWSQRLEKKLAYK 216


>gi|330957236|gb|EGH57496.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 229

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I + +   R SRH+  +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +    + P     F    I ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFDAVRQGPLWPYLRDPFWCAVITMTLHTAAYIAEILRGAIQAVPVG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|330812667|ref|YP_004357129.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380775|gb|AEA72125.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 260

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 75/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++ VP GQ EA++ALGL+       V LPQAMR+IIPP T+Q
Sbjct: 131 IALSLNYGAYLSEIFRAGILGVPNGQREASLALGLSETVIFWRVTLPQAMRTIIPPTTNQ 190

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     IY  +SI + L   R+ 
Sbjct: 191 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAIIYWLMSIALELIQARME 249


>gi|317053655|ref|YP_004118789.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952760|gb|ADU72233.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 218

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 113/223 (50%), Gaps = 18/223 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVF-----SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           RG+S   + M  +A  +       +F  G V+ L    ++R  H++  +A+   Y+   L
Sbjct: 2   RGISIHDIWMIISALRWTLLLALCTFACGAVIGLLVA-VARTSHQRGLQAVAWFYVE--L 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G+P L ++ L +      PV     F+G    S  F +  +A S    AF+ EI R  
Sbjct: 59  VQGIPLLGMLFLLFF---GMPV-----FLGIDVSS--FTAALVAFSLSAGAFLGEIWRGS 108

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AVP+GQ EA+++LG++  +  R V+LPQA+R  +PP     + L+KN+SLA  VGF +
Sbjct: 109 IMAVPKGQWEASLSLGISRLQMLRTVILPQALRLSLPPTVGFSVQLIKNTSLAALVGFVE 168

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L   G  +   T Q + I L+    Y +L   +A     L A+
Sbjct: 169 LTRSGQIVSGSTLQPLLIYLLVALCYFALCFPLARLSLHLEAR 211


>gi|326796876|ref|YP_004314696.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326547640|gb|ADZ92860.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 270

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 66/103 (64%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +AFIAE+ R+G+  V +GQ+EAA ALGL+  +  RL++LPQAMR I+PPL + +
Sbjct: 143 ALSISYSAFIAEVFRAGIQEVSKGQIEAAQALGLSGWQRFRLIILPQAMRKILPPLGNDF 202

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + ++K+S+L   +G  D+  +G      T Q  E   +  F+Y
Sbjct: 203 VAMIKDSALVSVLGVQDITQLGKVYSASTFQFFETYNVVAFMY 245



 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 81  SDSSY---ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +D SY   A  +  G + T  + F+    A+I G  +     S +++V  + R Y+E+ R
Sbjct: 31  ADESYQKIANTLSQGLLTTVGVTFAAFSIASIAGLFIALAGFSRHRIVREMSRFYIEIIR 90

Query: 138 NIPPLVVIFFL 148
            +P LV++F++
Sbjct: 91  GVPVLVLLFYI 101


>gi|308172211|ref|YP_003918916.1| cystine ABC transporter permease [Bacillus amyloliquefaciens DSM 7]
 gi|307605075|emb|CBI41446.1| cystine ABC transporter (permease), membrane protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328552021|gb|AEB22513.1| cystine ABC transporter (permease), membrane protein [Bacillus
           amyloliquefaciens TA208]
          Length = 234

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ G++++L  T L+R  + K  + +  +Y+S   + G P LV + + + L      
Sbjct: 40  ILSFIFGMIIALI-TALARMSNMKPLRWVFSVYVSA--VRGTPLLVQLFIIFYL------ 90

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FN     T+ P F S  IA S    A+ +EI+R+ + +VP+GQ EA   +G+T+RK 
Sbjct: 91  FPTFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKT 145

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369
              V+LPQA R  IPPL++ +++L+K++SLA  +  A+L      I  Q    I +I I 
Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIE 205

Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393
                W+  +L LSI+  +   RL+  +A
Sbjct: 206 AAFIYWIICFL-LSIVQLVIERRLDRYVA 233


>gi|281415788|ref|ZP_06247530.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
          Length = 300

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 96/164 (58%), Gaps = 5/164 (3%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++   YQL       G      G      + ++  AL+ Y  + IAE+VRSG+ +
Sbjct: 121 VPVLVMMVFFYQLFAQVARSGAIQPQDG-----PYYAVIAALTLYNGSVIAELVRSGVRS 175

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EAA A+G+T  ++ RLV +PQA+ +++P L SQ++ +LK+S+L   +GF +L+ 
Sbjct: 176 LPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSALGYLIGFFELLH 235

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               + +  G  ++ +++   I++ ++ ++     RL+ +++ +
Sbjct: 236 YARQLGSGNGNILQSLVVAAMIFIVINFLLTWAATRLSRRLSSR 279


>gi|226311780|ref|YP_002771674.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226094728|dbj|BAH43170.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 221

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 78/132 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+ ++ A+IAEI R  + ++ +GQMEA ++LG++ R+  R ++LPQAM+  I
Sbjct: 89  QFWSAALALAIHSGAYIAEIFRGSIQSIDKGQMEAGLSLGMSARQTMRRIILPQAMKRSI 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK SSLA  +   +L S+   +  +T   +   LI    YL + +     
Sbjct: 149 PPLGNQFILSLKESSLAAFIAMDELFSLARRLSAETFDEMTYFLIVALYYLVIVMAFTFV 208

Query: 385 MNRLNAKIALKE 396
           ++ +  ++A  E
Sbjct: 209 VHIMEKRLAKGE 220


>gi|154684846|ref|YP_001420007.1| YckJ [Bacillus amyloliquefaciens FZB42]
 gi|154350697|gb|ABS72776.1| YckJ [Bacillus amyloliquefaciens FZB42]
          Length = 229

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ G++++L  T L+R  + K  + +  +Y+S   + G P LV + + + L      
Sbjct: 35  ILSFIFGMIIALI-TALARMSNMKPLRWVFSVYVSA--VRGTPLLVQLFIIFYL------ 85

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FN     T+ P F S  IA S    A+ +EI+R+ + +VP+GQ EA   +G+T+RK 
Sbjct: 86  FPTFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKT 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369
              V+LPQA R  IPPL++ +++L+K++SLA  +  A+L      I  Q    I +I I 
Sbjct: 141 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIE 200

Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393
                W+  +L LSI+  +   RL+  +A
Sbjct: 201 AAFIYWIICFL-LSIVQHVIERRLDRYVA 228


>gi|330809176|ref|YP_004353638.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377284|gb|AEA68634.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 258

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 7/184 (3%)

Query: 220 PLLYIST----FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG--GSTVSPEFMSLYIAL 273
           PLL++      +L+ G P LV I   Y       +  +F  IG  G  +     +  IAL
Sbjct: 53  PLLHLPVRFYVWLMRGTPLLVQIVFLYTALAAGGIF-RFEDIGLFGLVIPGNIQAAIIAL 111

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A++AEI+R+G+ AV +GQ EA  +LG+T  K  R ++LPQA R I+PPL +++  
Sbjct: 112 GLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMTFAKLMRRIVLPQAFRVIVPPLGNEFNV 171

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +LKN++L   +G  +L+     + + T +  E+ L+    +L L+ +   F   L A+  
Sbjct: 172 MLKNTTLVSVIGVQELLLSTQMVTSATFRVFELYLVVAIYFLLLTTLWGFFQRWLEARFG 231

Query: 394 LKEK 397
             ++
Sbjct: 232 QSDR 235


>gi|315283361|ref|ZP_07871572.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii
           FSL S4-120]
 gi|313613009|gb|EFR86940.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii
           FSL S4-120]
          Length = 486

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|300718315|ref|YP_003743118.1| polar amino acid ABC transporter, permease protein [Erwinia
           billingiae Eb661]
 gi|299064151|emb|CAX61271.1| polar amino acid ABC transporter, permease protein [Erwinia
           billingiae Eb661]
          Length = 249

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 93/173 (53%), Gaps = 11/173 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L+++   Y   F  P+L   N  G       F ++   L  Y +A+IAEIVR
Sbjct: 69  YVLRGIPLLMVVFWTY---FCVPLLIGHNISG-------FATMLCTLVIYESAYIAEIVR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ A+P GQ EA+ ALG+++ K  R+V+LPQA+ + +P L SQ ++++K+S+L   +  
Sbjct: 119 GGIQALPGGQYEASRALGMSYLKTLRVVILPQALYNALPSLVSQLVSIIKDSTLGYVINV 178

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L      + NQ   +  ++  I    Y  +   +    N+L  +IA K + 
Sbjct: 179 PELTYAANQVNNQLLTKPFQVFAIVAISYYLICFSLTWLANKLEERIARKRRN 231


>gi|323465692|gb|ADX69379.1| Glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus H10]
          Length = 494

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I VFS ++GIVL +     RLS++   K    + + YI    I G P +V I   Y    
Sbjct: 301 ITVFSVLIGIVLGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 352 ---------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484



 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            VN   + +EK +L +   +L E A +   +      + + YA   + G   T  +    
Sbjct: 249 AVNKTISRVEKEDL-INKKYLPEAAKYM--KTAQKTNTMAKYAPYFVKGIEYTIIITVFS 305

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 306 VLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351


>gi|239627922|ref|ZP_04670953.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47_FAA]
 gi|239518068|gb|EEQ57934.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47FAA]
          Length = 230

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 119/229 (51%), Gaps = 24/229 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224
           F++     + T  + T   I +F+ ++GIVL  F   + R  +EKT K     A+  +Y+
Sbjct: 13  FVSENRWKYLTDGLKTTLIITLFACLMGIVLG-FIVGMIRSTYEKTHKLKLLNAICKVYL 71

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P +V + + Y + F            GS    + +   +A    + A++AEI
Sbjct: 72  T--VIRGTPVIVQLLIIYFVLF------------GSVRIDKVLVAILAFGINSGAYVAEI 117

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG++++  GQMEA  +LG  + +    +++PQA ++++P L +++++LLK +S+A  +
Sbjct: 118 FRSGIMSIDAGQMEAGRSLGFNYAQTMWYIIMPQAFKTVLPTLCNEFISLLKETSVAGYI 177

Query: 345 GFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389
              DL   G  I ++T  A    I + LI++ I +  + +I +   RL 
Sbjct: 178 AIQDLTKGGDIIRSRTYSAFMPLIAVALIYLIIVMIFTKLIQILERRLR 226


>gi|323697767|ref|ZP_08109679.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457699|gb|EGB13564.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 271

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 4/129 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IALS +  A+ +EI R+G+ ++ +GQ EAA +LG+      R ++LPQA+R ++P
Sbjct: 140 FRSAVIALSLFEGAYASEIFRAGITSIDKGQWEAAKSLGMGPYAMYRHIILPQAVRRVLP 199

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMI 381
           PLTSQ ++L+K+S+L   +   DL   G  I  +T    EI      I++ + L+LS ++
Sbjct: 200 PLTSQAVSLVKDSALVSTIAILDLTQRGRMIDAETFLTFEIWFTVAAIYLAVTLALSGVV 259

Query: 382 ALFMNRLNA 390
            L   R N 
Sbjct: 260 RLLERRFNG 268



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 65  SERAGFEIDQGIVPY----TSDSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRL 119
           S+R G+      +P      +D  +    L+ G   TF +    M+   +IG      R+
Sbjct: 39  SQRLGYNWQWYRIPQYLWTVTDQGFTWGPLMEGLGVTFRITGVSMVLMLVIGLTTALMRM 98

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD-HSIVLPFGMF 170
           SA+     + R Y+E+ RN P L+ IFF+Y  V  +L I    S V+   +F
Sbjct: 99  SASWAARGVARAYMELIRNTPLLIQIFFIYFVVAPILDISAFRSAVIALSLF 150


>gi|326693347|ref|ZP_08230352.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 482

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP ++ + +                     V+   ++L +    Y
Sbjct: 328 RGLPLMVLAFFIYIGLPGVIGMKI-------------------PAVTAGILTLVLNEGAY 368

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T AF    VR G  AV RGQMEAA +LGL + +A R V++PQ +R +IP   +Q++  LK
Sbjct: 369 TGAF----VRGGFEAVDRGQMEAARSLGLPYSRAMRRVIMPQGIRIMIPSFINQFIITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+++  Q   +  I   IYL +  ++    N +  +I
Sbjct: 425 DTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKRI 480


>gi|315304435|ref|ZP_07874723.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii
           FSL F6-596]
 gi|313627196|gb|EFR96041.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii
           FSL F6-596]
          Length = 486

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|167033586|ref|YP_001668817.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860074|gb|ABY98481.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 321

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 18/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           T   +   S  +  VL+L     RLS +     G A+ +    T    G+P L+ I   Y
Sbjct: 123 TTVYVSTLSIAIAFVLALLGATARLSSN-----GFAIAIASFYTSFFRGVPLLIQI---Y 174

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            ++   P LG   ++ G+  +       +ALS    A++ EI R+G+ ++PRGQ EA+ A
Sbjct: 175 LIYLGIPQLG---YVVGAVPAG-----ILALSLCYGAYMTEIFRAGISSIPRGQWEASRA 226

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +A   V+LPQ+MR IIPP  +Q++++LK+SSL   +G  +L+ +  T      +
Sbjct: 227 IGLTPFQAMTRVILPQSMRLIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTQGRAEFR 286

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +E+++    +Y  LSI++    +RL  +
Sbjct: 287 HLEMLITAAVLYWVLSILLEAVQSRLEKR 315



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 17/111 (15%)

Query: 39  VIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFW 98
           VI +WC   +   +      L   F++ + GF I QG+      S+ + AI         
Sbjct: 84  VITVWCELLLLFLLFFDTFDLSYSFIATKVGFMITQGVFTTVYVSTLSIAI--------- 134

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
                   A ++  L    RLS+N     I   Y   FR +P L+ I+ +Y
Sbjct: 135 --------AFVLALLGATARLSSNGFAIAIASFYTSFFRGVPLLIQIYLIY 177


>gi|291326464|ref|ZP_06124625.2| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
 gi|291314318|gb|EFE54771.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
          Length = 226

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 18/212 (8%)

Query: 186 NAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            AKI + + V+GI+    L   RLS     K       LY++TF    +P LV++ L + 
Sbjct: 24  TAKITLTAIVVGILWGTVLAVMRLSTF---KPISWFAALYVNTFR--SIP-LVMVLLWFY 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L    P L Q N +G   +SP+     +S  IA S + AA+ +EI+R+G+ ++ RGQ  A
Sbjct: 78  LIV--PSLLQ-NVLG---LSPKNDIRLISAMIAFSLFEAAYYSEIIRAGIQSISRGQASA 131

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+ALG+T+ +  RLV+LPQA ++++P L +Q + L ++SSL   +   D       I  +
Sbjct: 132 ALALGMTNMQTMRLVVLPQAFKAMVPLLLTQGIVLFQDSSLVYVLSLTDFFRTATNIGER 191

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  +E++L    +Y  +S   ++ +N L  +
Sbjct: 192 DGTQVEMVLFAGLVYFIVSFGASMLVNYLKKR 223



 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  +  + ++   + GT++   RLS  K ++W   +YV  FR+IP ++V+ + Y  
Sbjct: 20  GFIVTAKITLTAIVVGILWGTVLAVMRLSTFKPISWFAALYVNTFRSIPLVMVLLWFYLI 79

Query: 152 VLSVL 156
           V S+L
Sbjct: 80  VPSLL 84


>gi|226331011|ref|ZP_03806529.1| hypothetical protein PROPEN_04941 [Proteus penneri ATCC 35198]
 gi|225201806|gb|EEG84160.1| hypothetical protein PROPEN_04941 [Proteus penneri ATCC 35198]
          Length = 121

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 71/114 (62%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E VR+ + ++PRGQ  A +ALGLT  +  R VLLP A R IIPP+TS+ LNL+KNS++
Sbjct: 1   MCEQVRAAINSLPRGQKAAGLALGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAI 60

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +G  D+ +    +++ + +A E        Y+ ++++I L M+ L  ++ L
Sbjct: 61  ASTIGLIDMAAQANKLLDYSAKAYESFTAITLAYVFINVIIMLLMSWLEKRVRL 114


>gi|167039130|ref|YP_001662115.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X514]
 gi|300913280|ref|ZP_07130597.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X561]
 gi|307723706|ref|YP_003903457.1| polar amino acid ABC transporter inner membrane subunit
           [Thermoanaerobacter sp. X513]
 gi|166853370|gb|ABY91779.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X514]
 gi|300889965|gb|EFK85110.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X561]
 gi|307580767|gb|ADN54166.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X513]
          Length = 220

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 63/86 (73%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG+TH  A R V++PQA+++I
Sbjct: 86  PAFTAGVFALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           +P L ++++ +LK S++   +GFADL
Sbjct: 146 LPALGNEFIVMLKESAIISVIGFADL 171


>gi|330429987|gb|AEC21321.1| glutamate/aspartate transport system permease protein [Pusillimonas
           sp. T7-7]
          Length = 251

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  YT++ +AE VR+G+ ++P GQ  AA ALGL   +  R VLLP + R I+P
Sbjct: 109 FIPAVLCLGFYTSSRVAEQVRAGIESLPAGQRMAATALGLESAQVYRYVLLPSSFRIILP 168

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KN+S+A  +G  +LV    ++   + Q  E   +    YL L++++   M
Sbjct: 169 PLTSELLNLIKNTSVAFTIGLFELVGAARSMQEFSFQVFETFALATLFYLILNLVVVRSM 228

Query: 386 NRLNAKIAL 394
             L  ++A+
Sbjct: 229 LLLERRLAV 237



 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L G   T   A    + A  +GTLVG  R ++      +  +YVE+ RN+P LV
Sbjct: 19  TYLQTLLEGLAWTIGTATLSWLLALSMGTLVGVARTTSMPWARRLGTMYVELLRNVPLLV 78

Query: 144 VIFFLYKSVLSVLP--IPD--HSIVLPFGMFL 171
            +F  Y  +  ++P  + D    I  P+G+F+
Sbjct: 79  QMFLWYFVMPELVPRSLGDAIKQIAPPWGIFI 110


>gi|209965982|ref|YP_002298897.1| amino acid ABC transporter, permease protein [Rhodospirillum
           centenum SW]
 gi|209959448|gb|ACJ00085.1| amino acid ABC transporter, permease protein [Rhodospirillum
           centenum SW]
          Length = 226

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 23/231 (9%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLS--LFATRLS--RHFHEKTGKALPLLYISTFLIF 230
           S P L   T    ++   S VLG+VL+  +   RLS  R      G         TFL  
Sbjct: 9   SLPQLLSGTVVTVELVALSLVLGLVLAVGIAVLRLSGIRAVSMLAGG-------YTFLFR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVR 286
             P LV I L Y        LGQF  +  S + P     Y    +AL+  TAA+  EI+R
Sbjct: 62  STPLLVQIFLIYY------GLGQFETVRESILWPFLREPYWCAILALTLNTAAYTGEIIR 115

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AVP GQ+EAA A+G++ R   R ++LPQA R  +P   ++ + +++ SSLA  +  
Sbjct: 116 GGIRAVPFGQIEAARAVGMSGRLLFRRIVLPQAFRQALPAYGNEMIQMVQASSLASTITL 175

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L      I ++T Q +E+ +I   +YL+++  +   +    A++A + +
Sbjct: 176 MELTGAARAIASRTFQPVEVFVIAGALYLAMNYALTRIVRAAEARLAHERR 226


>gi|49484629|ref|YP_041853.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257423896|ref|ZP_05600325.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257426579|ref|ZP_05602981.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257429215|ref|ZP_05605602.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257431861|ref|ZP_05608224.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257434821|ref|ZP_05610872.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus M876]
 gi|282906756|ref|ZP_06314604.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282915273|ref|ZP_06323050.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282920997|ref|ZP_06328715.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282925903|ref|ZP_06333551.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus C101]
 gi|283959196|ref|ZP_06376637.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|293497669|ref|ZP_06665523.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293511249|ref|ZP_06669945.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus M809]
 gi|293549857|ref|ZP_06672529.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|295429000|ref|ZP_06821622.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297589505|ref|ZP_06948146.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus MN8]
 gi|49242758|emb|CAG41483.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272914|gb|EEV05016.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257276210|gb|EEV07661.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257279696|gb|EEV10283.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257282740|gb|EEV12872.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257285417|gb|EEV15533.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus M876]
 gi|282312732|gb|EFB43136.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus C101]
 gi|282315412|gb|EFB45796.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282320994|gb|EFB51328.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282329655|gb|EFB59176.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|283471633|emb|CAQ50844.1| L-cystine transport system permease protein TcyB [Staphylococcus
           aureus subsp. aureus ST398]
 gi|283788788|gb|EFC27615.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|290918904|gb|EFD95980.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291096600|gb|EFE26858.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291465875|gb|EFF08405.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus M809]
 gi|295126759|gb|EFG56403.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297578016|gb|EFH96729.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus MN8]
 gi|312437165|gb|ADQ76236.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194906|gb|EFU25294.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 239

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 98/155 (63%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           T+R+  + ++LPQA+R  IP L + +L+L+K++SL
Sbjct: 147 TYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 181


>gi|328910284|gb|AEB61880.1| cystine ABC transporter (permease), membrane protein [Bacillus
           amyloliquefaciens LL3]
          Length = 229

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ G++++L  T L+R  + K  + +  +Y+S   + G P LV + + + L      
Sbjct: 35  ILSFIFGMIIALI-TALARMSNMKPLRWVFSVYVSA--VRGTPLLVQLFIIFYL------ 85

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FN     T+ P F S  IA S    A+ +EI+R+ + +VP+GQ EA   +G+T+RK 
Sbjct: 86  FPTFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKT 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369
              V+LPQA R  IPPL++ +++L+K++SLA  +  A+L      I  Q    I +I I 
Sbjct: 141 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIE 200

Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393
                W+  +L LSI+  +   RL+  +A
Sbjct: 201 AAFIYWIICFL-LSIVQLVIERRLDRYVA 228


>gi|289435591|ref|YP_003465463.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289171835|emb|CBH28381.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 486

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|163789692|ref|ZP_02184129.1| glutamine ABC transporter, permease protein [Carnobacterium sp.
           AT7]
 gi|159874914|gb|EDP68981.1| glutamine ABC transporter, permease protein [Carnobacterium sp.
           AT7]
          Length = 216

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 31/210 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           VFSF++G +L L        F +  G      + LPLL I  F  F LP +        +
Sbjct: 31  VFSFIIGAILGLLRYMKIPVFSKIIGAIVDLIRNLPLLLIIFFTYFALPQI-------GI 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            FD                  F S   AL+ + +A ++EI+R+GL +VP GQMEA  + G
Sbjct: 84  RFDI-----------------FWSAVAALTIFESAMLSEIIRAGLNSVPSGQMEAGRSTG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363
           L++ +    +L+PQA ++++PP+ SQ ++L+K++SLA  +   +L      I  Q T   
Sbjct: 127 LSYLQTLWFILIPQAFKAMVPPIVSQLISLIKDTSLATIISLPELTHNARIIYGQNTTYV 186

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I + +   F Y  +   ++    R   K+A
Sbjct: 187 IPMFIALAFFYFIICYALSKVAKRFETKLA 216


>gi|116249396|ref|YP_765237.1| putative ATP-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254046|emb|CAK12443.1| putative ATP-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 511

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   ++G+ L++     SR         LP   I T +  GLP +V I           +
Sbjct: 41  VLGVIIGMALAVMGISQSRWLR------LPA-RIYTDIFRGLPAIVTIL----------I 83

Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L I ALS    A+I EI RSG+ +V RGQMEA  AL ++H 
Sbjct: 84  IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSHG 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364
           +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      TG   
Sbjct: 144 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++L  +F YL +++ +  F+N ++A++ L ++
Sbjct: 204 PLLLAGVF-YLVITVPLTHFVNYIDARLRLGKQ 235


>gi|110800463|ref|YP_695035.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           perfringens ATCC 13124]
 gi|110675110|gb|ABG84097.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens ATCC 13124]
          Length = 223

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 76/109 (69%), Gaps = 1/109 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  IA+S  +AA+++EI+R+G+ AV +GQ+EAA +LG+    A RL++LPQA+++I+P +
Sbjct: 96  SCIIAISLNSAAYVSEIIRAGIDAVDKGQLEAARSLGMAEGMAMRLIILPQAIKNILPAI 155

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-IILIWMFIYL 375
            ++++ ++K SS+A  +G A+L+     +   T +  E +I+I MF ++
Sbjct: 156 GNEFVAIIKESSMASTIGVAELMYSSKIVTGATYKGFEPLIVIAMFYFV 204


>gi|71735739|ref|YP_277029.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257483717|ref|ZP_05637758.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|298489317|ref|ZP_07007332.1| Arginine transport system permease protein artM [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71556292|gb|AAZ35503.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298156168|gb|EFH97273.1| Arginine transport system permease protein artM [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320331786|gb|EFW87724.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330872637|gb|EGH06786.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330987162|gb|EGH85265.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331012130|gb|EGH92186.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 229

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I + +   R SRH+  +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +    + P     F    + ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFDVVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPVG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|307131246|ref|YP_003883262.1| ABC transporter permease [Dickeya dadantii 3937]
 gi|306528775|gb|ADM98705.1| ABC transporter permease protein [Dickeya dadantii 3937]
          Length = 234

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 82/133 (61%), Gaps = 1/133 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+SP F +   ALS  +AAF AE+ R G++++  GQ E A ALG++   A R V+LPQA+
Sbjct: 98  TLSP-FAAAVTALSAQSAAFYAEVYRGGILSIAEGQWEGAKALGMSRPLALRRVILPQAL 156

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R +IPPL  +   L+K++SLA ++ + +L+     I +Q+ + +E+  +   +Y +L  +
Sbjct: 157 RRMIPPLIERSFELIKSTSLASSLAYGELLYQAMQINSQSFRPLEVYSLAALLYFTLLFV 216

Query: 381 IALFMNRLNAKIA 393
           ++L    +  +++
Sbjct: 217 LSLLSQYVERRLS 229


>gi|317053432|ref|YP_004119199.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953171|gb|ADU72643.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 243

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 74/130 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L CY  A +AE+VR+GL ++ +GQ  A  ALGLT  +  R VLLP A R + 
Sbjct: 107 QFYTAVLCLGCYHGARMAEVVRAGLESLSKGQRMAGQALGLTLPQTYRYVLLPVAYRIVT 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P +TS++L+  KN+S+A+A+G  +L      +   T Q  E   +   +YL L++ I   
Sbjct: 167 PAITSEFLSCTKNTSVALAIGLIELTGSARAMQENTFQVFEAFSVATVLYLLLNMAIVFA 226

Query: 385 MNRLNAKIAL 394
           M  +  + AL
Sbjct: 227 MRGIEKRAAL 236


>gi|58336481|ref|YP_193066.1| glutamine ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227903033|ref|ZP_04020838.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus acidophilus ATCC 4796]
 gi|58253798|gb|AAV42035.1| glutamine ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227869207|gb|EEJ76628.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus acidophilus ATCC 4796]
          Length = 491

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I +FS ++GI+L +     RLS++   K    + + YI    I G P +V I   Y    
Sbjct: 298 ITIFSVLIGIILGMLLALMRLSKN---KLLHGIAVCYIE--FIRGTPQMVQILFVY---- 348

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 349 ---------FGVGTLISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 399

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 400 LSQAKAYRYVVIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 459

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 460 LPLFIAMIIYFIMTFTLTRLLN 481



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 3/109 (2%)

Query: 41  FLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLA 100
            +  VN   N +EK NL +   +L E A +   +      + + YA   + G   T  + 
Sbjct: 243 LIRAVNKTINRVEKKNL-INKEYLPEAAKYM--KTAQKSNTMAKYAPYFVKGIGYTIVIT 299

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
              ++   I+G L+   RLS NKL+  I   Y+E  R  P +V I F+Y
Sbjct: 300 IFSVLIGIILGMLLALMRLSKNKLLHGIAVCYIEFIRGTPQMVQILFVY 348


>gi|260665023|ref|ZP_05865873.1| ABC transporter permease component [Lactobacillus jensenii
           SJ-7A-US]
 gi|260561077|gb|EEX27051.1| ABC transporter permease component [Lactobacillus jensenii
           SJ-7A-US]
          Length = 534

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 77/120 (64%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G++A P+GQ EAA ALG+TH +    ++LPQA+++ +P +T++++
Sbjct: 390 VSINTGAYLAEVIRGGIMATPKGQFEAASALGMTHNQRMWNIILPQAIKNCLPSITNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N +  K+
Sbjct: 450 VNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLMISAIYLVLTFSITRIFNLIEKKL 509


>gi|227524120|ref|ZP_03954169.1| ABC superfamily ATP binding cassette transporter, substrate binding
           and permease protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088751|gb|EEI24063.1| ABC superfamily ATP binding cassette transporter, substrate binding
           and permease protein [Lactobacillus hilgardii ATCC 8290]
          Length = 488

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 21/202 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  ++G+VL+L   R SR   ++  + L + Y  T  I G P +V +   Y         
Sbjct: 303 FGVLIGVVLALM--RFSR---QRWLRGLAISY--TEFIRGTPLMVQVMFVY--------- 346

Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               F  G  ++ P  +S  IA+S  + A++AEI+R G+ +V +GQ EAA +LGLT    
Sbjct: 347 ----FGIGVIINIPALISGMIAVSLNSGAYVAEIIRGGINSVGKGQTEAAESLGLTKGDM 402

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA ++I P L +++++L+K SS+   +G  DL+     +   T + +  I + 
Sbjct: 403 MRYVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVMPIFVA 462

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
           M +Y  ++ ++   +N    K+
Sbjct: 463 MVLYFLMTFLLTRLLNHYEGKM 484


>gi|220914445|ref|YP_002489754.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219861323|gb|ACL41665.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 365

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 121/217 (55%), Gaps = 25/217 (11%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVL 237
           T+   A   +  FVLG +L+L   RLS         A PLL    +  +++    P LV 
Sbjct: 123 TLKLTAISGILGFVLGFILALM--RLS---------ASPLLVSVSWTFSWIFRSTPLLVQ 171

Query: 238 IALKYQLHF--DKPVLG------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           + L Y L +  +K  LG      +F  +  +T+  +F +  + L+   AA+ AEI+R G+
Sbjct: 172 LLLWYNLGYLYEKISLGIPFTDVRFFEVQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGI 231

Query: 290 IAVPRGQMEAAIALGL-THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++V +GQ+EAA ALG+   R++TR+VL PQAMR+I+P   ++ + L+K +S+   + +++
Sbjct: 232 LSVDQGQLEAAAALGIPAWRRSTRIVL-PQAMRAILPTAFNEIIGLVKGTSIVYVLAYSE 290

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           L      I N+T Q + ++L+    Y+ ++ ++++F 
Sbjct: 291 LFYTVQVIYNRTQQVLPLLLVATLWYVVITSVLSVFQ 327


>gi|159026343|emb|CAO86432.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 241

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 115/232 (49%), Gaps = 25/232 (10%)

Query: 168 GMFLNN---RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           G+FL       LS   LT+       + SF LG++L+L      R       + L + YI
Sbjct: 27  GLFLKAIPLDDLSGLILTLLVAIASMILSFPLGVLLAL-----GRQSELPAIRWLSIGYI 81

Query: 225 STFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIA 282
              L+ GLP L +L   +  L    P          +   PE +   IA  + + AA++A
Sbjct: 82  E--LLRGLPLLGILFMAQVMLPLILP----------AGTRPERVIRAIAGFTLFAAAYLA 129

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR GL A+P+GQ+EAA ALGL       L++LPQA++++IP +  Q+++L K++SL  
Sbjct: 130 ENVRGGLQAIPKGQIEAARALGLKPIFVLLLIVLPQALKAVIPAIVGQFISLFKDTSLLA 189

Query: 343 AVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            VG  DL+ + G+++      G   E+ L   FIY      ++L   RL  +
Sbjct: 190 IVGLVDLLGMAGSVLANPKFIGDYPEVYLFLAFIYWIFCYSMSLASRRLEQR 241


>gi|145589171|ref|YP_001155768.1| polar amino acid ABC transporter, inner membrane subunit
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047577|gb|ABP34204.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 222

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I    +  AF +EIVR+G+ +VPRGQ  AA ALG+T+ +  R V+LPQA R++IP 
Sbjct: 93  LSATITFIAFEGAFFSEIVRAGIQSVPRGQGYAAEALGMTYGQNMRFVVLPQAFRNMIPV 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +Q + L +++SL  A+G  DL+          G+ IE  ++  F Y  +   ++  + 
Sbjct: 153 FMTQTIILFQDTSLVYAIGAYDLLKGFEIAGKNYGRPIETYILAAFTYFIICFSLSKIVR 212

Query: 387 RLNAKIAL 394
           R+ AK+A+
Sbjct: 213 RVQAKVAI 220


>gi|293554038|ref|ZP_06674638.1| ABC-type amino acid transport system, permease component
           [Enterococcus faecium E1039]
 gi|293569787|ref|ZP_06680874.1| ABC-type amino acid transport system, permease component
           [Enterococcus faecium E1071]
 gi|291587535|gb|EFF19412.1| ABC-type amino acid transport system, permease component
           [Enterococcus faecium E1071]
 gi|291601820|gb|EFF32072.1| ABC-type amino acid transport system, permease component
           [Enterococcus faecium E1039]
          Length = 218

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 14/166 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +I  LP L++I   Y   F  P +G Q N          F S   AL+ + +A ++EI R
Sbjct: 61  IIRNLPLLLIIFFTY---FALPQIGIQMNI---------FWSAVAALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL AVP+GQMEA ++ GLT+ +  R ++LPQA +S+IP + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214


>gi|269139979|ref|YP_003296680.1| glutamate-aspartate transport system permease [Edwardsiella tarda
           EIB202]
 gi|267985640|gb|ACY85469.1| glutamate-aspartate transport system permease [Edwardsiella tarda
           EIB202]
 gi|304559812|gb|ADM42476.1| Glutamate Aspartate transport system permease protein GltK
           [Edwardsiella tarda FL6-60]
          Length = 225

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 12/210 (5%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           KI + + V+GI+    L   RLSR    K    L  LY++ F    +P LV++ L + L 
Sbjct: 25  KITLTAVVVGILWGTLLAVMRLSRW---KPLAWLAALYVNLFR--SVP-LVMVLLWFYLV 78

Query: 246 FDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              P L Q  F+G S  S    +S  +A + + AA+ +EI+R+G+ +V RGQ  AA+ALG
Sbjct: 79  V--PSLLQ-RFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALG 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  ++  LV+LPQA R+++P L +Q + L +++SL   +  AD      TI  + G  +
Sbjct: 136 MTPWQSLYLVVLPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQL 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E+IL    +Y  +S+  +L ++ L  + AL
Sbjct: 196 EMILFAGAVYFIISLSASLLVSHLKKRSAL 225



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GTL+   RLS  K +AW+  +YV +FR++P ++V+ + 
Sbjct: 16  LLDGMVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  V S+L
Sbjct: 76  YLVVPSLL 83


>gi|293367120|ref|ZP_06613791.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291318681|gb|EFE59056.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 239

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 118/207 (57%), Gaps = 10/207 (4%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    N     T++P   ++ I LS    A+ +EI+R G++++P+GQ EAA ++G+
Sbjct: 88  PELGRLVTNNADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +R+  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + 
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           I L+   +Y  +  +I++      ++I
Sbjct: 207 IYLLVALMYWVVCFVISIIQGWYESRI 233


>gi|116492195|ref|YP_803930.1| ABC-type amino acid transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116102345|gb|ABJ67488.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 218

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 31/220 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    + S++LG +L        ++F    G      + LPL+ I  F+ FGLP 
Sbjct: 22  ITVEVSVISIILSYILGGILGFIRYMRIKYFSAIVGFIIDLIRNLPLILIFFFVYFGLPN 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L               +   I  S          +AL+ + +A +AEI+R G+ ++ +
Sbjct: 82  LGL---------------RIEIIPSSI---------LALTVFESAMLAEIIRGGIESISK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A A GLT+ +A R ++LPQA   +IP L SQ+++L+K++SLA  +   +L+    
Sbjct: 118 GQMEGARANGLTYWQAMRYIILPQAQVRMIPALVSQFISLIKDTSLATIIMLPELMYHAQ 177

Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I  Q T   I + +    +Y  +   ++LF   L  +IA
Sbjct: 178 IIYGQNTNYIIPMFVALAVMYFIVCYALSLFSRYLEKRIA 217


>gi|163857805|ref|YP_001632103.1| amino acid ABC transporter, permease protein [Bordetella petrii DSM
           12804]
 gi|163261533|emb|CAP43835.1| amino acid ABC transporter, permease protein [Bordetella petrii]
          Length = 229

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 62/84 (73%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +++LS YT++++AEIV + ++AVPRGQ+E A+ LGL   +A RLV+LPQAMR I+ P++ 
Sbjct: 96  FVSLSVYTSSYVAEIVMNAILAVPRGQVEGALTLGLRPLQALRLVILPQAMRLIVQPMSG 155

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
            Y+ L+K++++   VG  +L   G
Sbjct: 156 VYVMLIKSTAIVSVVGITELTRQG 179


>gi|325000355|ref|ZP_08121467.1| amino acid ABC transporter membrane protein [Pseudonocardia sp. P1]
          Length = 301

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/145 (35%), Positives = 85/145 (58%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L AL  +L    P   +F  +  +T+   F +  + L    AA++AEIVRSG+ +V  GQ
Sbjct: 121 LSALYPRLSLGIPFGPEFVVVDTNTLISPFAAALLGLGLNEAAYMAEIVRSGIQSVDGGQ 180

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALG+T  +  R V+LPQAMR I+PP  ++ + +LK +SL V +G+ +L++    I
Sbjct: 181 SEAAGALGMTRAQTLRRVVLPQAMRVIVPPTGNETIGMLKTTSLVVVIGYLELLTSVQRI 240

Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381
            +   + I ++++    YL L+ ++
Sbjct: 241 YSANFEVIPLLIVAAAWYLVLTSLL 265


>gi|296534282|ref|ZP_06896760.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296265398|gb|EFH11545.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 287

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 97/171 (56%), Gaps = 6/171 (3%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           T+L  G P ++ + L + +    P LG   F+      ++P   +L + L     A+ +E
Sbjct: 112 TWLFRGTPVILQLLLWFNMALIFPRLGFGDFSVRTVDVMTPALAAL-LGLGINQGAYTSE 170

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R+G+++V  GQ EAA A+G+T  +A R ++ PQAM+ +IPPL ++++ ++K +SLA  
Sbjct: 171 VIRAGMLSVDAGQYEAAKAIGMTRLRALRRIIFPQAMKVVIPPLGNEFIGMVKLTSLASV 230

Query: 344 VGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           + FA+++     I     + IE++++   W  I +S+   + + + R  A+
Sbjct: 231 IQFAEILHAAQNIYYANSRVIELLIVAALWYLIIVSVLTPLQMLLERRFAR 281



 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A AI+ G  NT W+ F+ M     +G +    R+S N ++  +   Y  +FR  P ++ +
Sbjct: 65  APAIMAGLYNTLWMTFAAMALGIALGVVTAVMRMSPNPVLQGVAMGYTWLFRGTPVILQL 124

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 125 LLWFNMAL 132


>gi|294101083|ref|YP_003552941.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616063|gb|ADE56217.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 520

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 8/135 (5%)

Query: 229 IFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFI 281
           IFG   L  +A+ Y +     PVL Q  F F G    G  +SP F  + + L    AA+ 
Sbjct: 327 IFGPTLLSRLAIGYIEAIRGTPVLIQLFFIFYGLPNIGIKLSPFFAGI-LGLGLNYAAYE 385

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+GL++VPR QME A+ALG+T  +A R V+LPQA+R  +PP+T+ +++LLK+SSL 
Sbjct: 386 AENYRAGLLSVPRQQMEGALALGMTRWQALRHVVLPQALRVALPPVTNDFISLLKDSSLV 445

Query: 342 VAVGFADLVSVGGTI 356
             +   DL    G +
Sbjct: 446 SVITMVDLTKAYGQL 460


>gi|312115425|ref|YP_004013021.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220554|gb|ADP71922.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 230

 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 16/214 (7%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP-----------TLVLIALKY 242
           F+ G+V +L  T L+  F    G  L L+ +S   ++ LP           +L L+ + +
Sbjct: 18  FLQGMVFTLKLTILAAIFGTLFGTVLALMRLSG--VWPLPQIAGAYVNFVRSLPLLLVIF 75

Query: 243 QLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              F  P + Q   +G     P   F++  I  S + A F +EI+R+G+ ++P+GQ+ A 
Sbjct: 76  WFFFLVPFIAQ-KMVGSPRPIPIDPFLTALITFSLFEAVFFSEIMRAGIQSLPKGQVAAG 134

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL++ +  R ++LPQA R+++P L +Q + L +++SL   +   D + + G I  + 
Sbjct: 135 YALGLSYTQVMRRIVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSLNDFLGIAGKIGQRD 194

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G+  E+ +    +Y  +S   +  + RL A  A+
Sbjct: 195 GRLTEMYIFAALVYFLISFAASQAVRRLQAHTAI 228


>gi|302669342|ref|YP_003832492.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus
           B316]
 gi|302397006|gb|ADL35910.1| amino acid ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 228

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 77/122 (63%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++EIVR+G++AV +GQMEA  +LGL+     R ++LPQA+++IIPPL ++++ L+K
Sbjct: 107 SGAYVSEIVRAGILAVDKGQMEAGRSLGLSKATTMRYIILPQAIKNIIPPLGNEFITLIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +++   V   DL  V   I ++T  A   ++    IY  +  ++++F+ +L  ++   +
Sbjct: 167 ETAIVGYVSLTDLTRVANQIASRTYDAFMPLIGAAVIYFVIIKLLSIFLEKLERRMRRSD 226

Query: 397 KK 398
            +
Sbjct: 227 NR 228


>gi|153010173|ref|YP_001371387.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562061|gb|ABS15558.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 219

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 30/241 (12%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D SIV P+   L         LT+ +       SFVLGI  +L         +     A 
Sbjct: 5   DFSIVTPYTDLLLTGLWWTLVLTVSSA----FLSFVLGIAFALVV------LYAPAILAY 54

Query: 220 PLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           P+ +   +L  G P L+ + L Y    Q+  + P LG               +  I LS 
Sbjct: 55  PVRFF-MWLFMGTPLLLQLFLIYFGLVQIGINIPALG---------------AGIIGLSL 98

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + A + A+I+R+G++AV  GQME A ++G +H +A R V++PQA+R+ IPP+ +  + LL
Sbjct: 99  HFAVYNADIIRAGIVAVDPGQMEGARSIGFSHGQALRYVVIPQAIRNTIPPIGNNMIVLL 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K++SL   +G A+LV      I++T    E  +    IY  +++++   + R+  K+ + 
Sbjct: 159 KDTSLVSIIGIAELVHSAQLAISETFSPFEFYITVAAIYYVVNLVLEAGLRRIERKVEVT 218

Query: 396 E 396
            
Sbjct: 219 R 219


>gi|293603254|ref|ZP_06685685.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818343|gb|EFF77393.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 233

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 15/165 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P+L    F  FG+P L+  A    L+               +   EF+   IA+S  
Sbjct: 67  RNVPMLVHILFWYFGVPALLPQAASDWLN---------------SHGSEFIMSCIAISLV 111

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A+I E +RS +  +P GQ+EAA ALGL   +  R V+LPQA R  IPPL +Q L LLK
Sbjct: 112 MSAYICEDLRSAVRGIPPGQVEAARALGLGFLRTMRCVVLPQAFRIAIPPLLNQTLLLLK 171

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           N+SLA+A+G  +L + G  I N T +  E   +   IYL LS +I
Sbjct: 172 NTSLAMAIGVTELTAAGREIENYTFRTFEAYAVVTVIYLVLSFLI 216



 Score = 39.7 bits (91), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y + +  GFV T  LA    + A  +G+L+   RL+ + +   +   YV   RN+P 
Sbjct: 12  QGEYPSWLFRGFVTTLALAGLAWVLAFCVGSLLAVIRLTGSPVANAVIATYVAFHRNVPM 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV I F Y  V ++LP
Sbjct: 72  LVHILFWYFGVPALLP 87


>gi|238855887|ref|ZP_04646176.1| amino acid ABC transporter permease protein [Lactobacillus jensenii
           269-3]
 gi|282931561|ref|ZP_06337058.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|238831550|gb|EEQ23898.1| amino acid ABC transporter permease protein [Lactobacillus jensenii
           269-3]
 gi|281304317|gb|EFA96422.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
          Length = 534

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 77/120 (64%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G++A P+GQ EAA ALG+TH +    ++LPQA+++ +P +T++++
Sbjct: 390 VSINTGAYLAEVIRGGIMATPKGQFEAASALGMTHNQRMWNIILPQAIKNCLPSITNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N +  K+
Sbjct: 450 VNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLMISAIYLVLTFSITRIFNLIEKKL 509


>gi|32266981|ref|NP_861013.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter hepaticus ATCC 51449]
 gi|32263033|gb|AAP78079.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter hepaticus ATCC 51449]
          Length = 249

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 70/114 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG++AVP+GQ EA+ + G T+ +  R ++LPQ ++ I+PP+T+Q
Sbjct: 121 LGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPITNQ 180

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            +NL+KN+S+ + +   +++ V  +    T       L   F+Y  +   +A F
Sbjct: 181 VVNLIKNTSVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYFIVCYPLAYF 234



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T  ++   ++ A I GT+ G    S   ++    R+YVE+F+N P ++ IFFLY
Sbjct: 44  LSGFGYTLSVSILALLIALIFGTIGGVMATSKITILRAYTRMYVEIFQNTPLVIQIFFLY 103


>gi|319651742|ref|ZP_08005868.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317396561|gb|EFV77273.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 215

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 78/129 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S+ + L+ +  A+IAEI R  + ++ +GQMEA  +LG+T   A R ++LPQA R  +
Sbjct: 84  QFWSVVLGLAFHNGAYIAEIFRGSIQSIDKGQMEAGRSLGMTAGLAMRRIILPQAFRRAM 143

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSLA  +G  +L +V  T  +     +  +LI    YL L ++ ++ 
Sbjct: 144 PPLGNQFIIALKDSSLASFIGMYELFNVATTYGSNEYDYMSYLLIVAVYYLVLVLIFSIL 203

Query: 385 MNRLNAKIA 393
           +N +  ++A
Sbjct: 204 VNMIEKRMA 212


>gi|227509453|ref|ZP_03939502.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227512150|ref|ZP_03942199.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227084544|gb|EEI19856.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227191165|gb|EEI71232.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 488

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 21/202 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  ++G+VL+L   R SR   ++  + L + Y  T  I G P +V +   Y         
Sbjct: 303 FGVLIGVVLALM--RFSR---QRWLRGLAISY--TEFIRGTPLMVQVMFVY--------- 346

Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               F  G  ++ P  +S  IA+S  + A++AEI+R G+ +V +GQ EAA +LGLT    
Sbjct: 347 ----FGIGVIINIPALISGMIAVSLNSGAYVAEIIRGGINSVGKGQTEAAESLGLTKGDM 402

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA ++I P L +++++L+K SS+   +G  DL+     +   T + +  I + 
Sbjct: 403 MRYVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVMPIFVA 462

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
           M +Y  ++ ++   +N    K+
Sbjct: 463 MVLYFLMTFLLTRLLNHYEGKM 484


>gi|261420187|ref|YP_003253869.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|297529844|ref|YP_003671119.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. C56-T3]
 gi|319766999|ref|YP_004132500.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. Y412MC52]
 gi|261376644|gb|ACX79387.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|297253096|gb|ADI26542.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. C56-T3]
 gi|317111865|gb|ADU94357.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC52]
          Length = 216

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 35/209 (16%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHE--KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           FVF  ++G++       LS+      +T + LPLL I  F  F LP       +  L  D
Sbjct: 34  FVFGIIIGVIRYTKIPVLSQLLAVLVETIRNLPLLLIIFFTYFALP-------EVGLKLD 86

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           K                    LY A+S    + +A ++EIVRSGL ++ +GQ+EAA + G
Sbjct: 87  K--------------------LYAAISALVIFESAMLSEIVRSGLQSIDKGQIEAARSSG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQ 362
           LT+ +    ++LPQA+R ++PP+ SQ+++LLK++SLA+ +   +L++    IIN      
Sbjct: 127 LTYVQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMN-HAQIINGRNVNF 185

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I I ++  F+Y  ++  ++L   RL  +
Sbjct: 186 VIPIFILVAFMYFIVNYSLSLLSRRLEYR 214



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 84  SYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           +YA A    +L GF+ T  +AF  ++ + + G ++G  R +   +++ +  V VE  RN+
Sbjct: 6   AYAPAHLKFLLQGFLVTLEVAFISIVLSFVFGIIIGVIRYTKIPVLSQLLAVLVETIRNL 65

Query: 140 PPLVVIFFLY 149
           P L++IFF Y
Sbjct: 66  PLLLIIFFTY 75


>gi|69246347|ref|ZP_00603903.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|258616329|ref|ZP_05714099.1| Glutamine transport system permease protein [Enterococcus faecium
           DO]
 gi|68195300|gb|EAN09751.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
          Length = 218

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 14/166 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +I  LP L++I   Y   F  P +G Q N          F S   AL+ + +A ++EI R
Sbjct: 61  IIRNLPLLLIIFFTY---FALPQIGIQMNI---------FWSAVAALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL AVP+GQMEA ++ GLT+ +  R ++LPQA +S+IP + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214


>gi|309813087|ref|ZP_07706813.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308432971|gb|EFP56877.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 495

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 107/201 (53%), Gaps = 14/201 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+VL+L    L+R            ++IS F   G P LV +A+   + F  P LG
Sbjct: 304 SFAIGLVLAL-GVALARMSANAALSWPARIFISIFR--GTPLLVQLAI---IFFGMPQLG 357

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    +SP + S  IA S   AA+ AEI+R+ +++VP+GQ EAA  +G+    A R
Sbjct: 358 -------IKLSP-WPSAIIAFSLNVAAYSAEIIRAAILSVPKGQWEAAETIGMNRATALR 409

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA+R  +PPL++  ++L+K++SLA  +   ++          +G  +E+  +   
Sbjct: 410 RIILPQALRVAVPPLSNTLISLVKDTSLASTILVTEMFRQAQIAAAPSGDFLELYGVAAA 469

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
           IY +L  +++L   RL  ++ 
Sbjct: 470 IYWALCFILSLVQGRLENRLG 490


>gi|302548267|ref|ZP_07300609.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302465885|gb|EFL28978.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces himastatinicus ATCC 53653]
          Length = 261

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 36/215 (16%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL-------IALKY 242
           F F  V G+VL+L   RLS        + L + YI  F   G+P L++       + L +
Sbjct: 69  FGFGLVAGLVLALM--RLS---QVPPYRWLSVAYIEFFR--GVPALLVFIALGFGVPLAF 121

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           Q+  D+                 ++++ +AL    AA++AE +R+G+ AVP+GQMEAA +
Sbjct: 122 QVALDR-----------------YVTVMLALGLVGAAYMAETIRAGIRAVPKGQMEAARS 164

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIIN 358
           LG++H +A   +++PQA R ++PPLT++ + L K+SSL   +G +    +L   G   +N
Sbjct: 165 LGMSHGRAMVSIIIPQAFRIVLPPLTNELILLTKDSSLVYLLGLSLDQYELSKFGREALN 224

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           Q  +++  IL+    YL +++ +   +  L ++ A
Sbjct: 225 QH-RSLTPILVAGLCYLLITVPLGQLVRWLESRTA 258


>gi|255026707|ref|ZP_05298693.1| hypothetical protein LmonocytFSL_10867 [Listeria monocytogenes FSL
           J2-003]
          Length = 486

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|57865359|ref|YP_189560.1| amino acid ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|251811884|ref|ZP_04826357.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875171|ref|ZP_06284044.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|57636017|gb|AAW52805.1| amino acid ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|251804681|gb|EES57338.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295936|gb|EFA88457.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|329734620|gb|EGG70931.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU045]
          Length = 239

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 118/207 (57%), Gaps = 10/207 (4%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    N     T++P   ++ I LS    A+ +EI+R G++++P+GQ EAA ++G+
Sbjct: 88  PELGRLVTNNADNQWTLAPVIAAV-IGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +R+  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + 
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           I L+   +Y  +  +I++      ++I
Sbjct: 207 IYLLVALMYWVVCFVISIIQGWYESRI 233


>gi|329726529|gb|EGG62992.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU144]
 gi|329735014|gb|EGG71311.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU028]
          Length = 239

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 118/207 (57%), Gaps = 10/207 (4%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    N     T++P   ++ I LS    A+ +EI+R G++++P+GQ EAA ++G+
Sbjct: 88  PELGRLVTNNADNQWTLAPVIAAV-IGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +R+  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + 
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           I L+   +Y  +  +I++      ++I
Sbjct: 207 IYLLVALMYWVVCFIISIIQGWYESRI 233


>gi|222153166|ref|YP_002562343.1| transport system membrane protein [Streptococcus uberis 0140J]
 gi|222113979|emb|CAR42274.1| transport system membrane protein [Streptococcus uberis 0140J]
          Length = 219

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 14/200 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+ G+ L +    + R  H    K + + Y+S  ++ G+P +V++   + L+F  P   
Sbjct: 30  SFMTGVTLGILLAIMGRSQHRILQKMVKV-YVS--IMRGVPMIVVL---FMLYFGMP--- 80

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FN        P  +  YI  S  ++A+I+EI RS + AV  GQ EAA ALG++ ++  +
Sbjct: 81  YFNL-----QLPALLCAYIGFSLVSSAYISEIFRSSINAVDHGQWEAAQALGISKKRVIQ 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA R  IPPL +  ++++K+SSLA  +   D+      +  +    + + ++  F
Sbjct: 136 KVILPQAFRIAIPPLGNVVVDMIKSSSLAAMITVPDIFQNAKIVGGREWDYMSMYILVAF 195

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           IY  L  +   F + L  ++
Sbjct: 196 IYWVLCYLFERFQSYLEDRL 215


>gi|313115991|ref|ZP_07801418.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310621755|gb|EFQ05283.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 254

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 21/213 (9%)

Query: 193 SFVLGIVL-SLFATRLSRHFHEKTGKALPLL-------YISTFLIFGLPTLVLIALKYQL 244
           +  LGIVL S+ A     H  ++ G   P+L        I T +I G P +V + +   +
Sbjct: 55  ALALGIVLGSVVALVRVAHDQQRPGHKNPVLGFFNIICEIYTTIIRGTPMMVQLLIMSMV 114

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F       F  +G            +AL   + A+++EI+R GL+AV  GQMEA  +LG
Sbjct: 115 IFANS--RNFTMVGA-----------LALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLG 161

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L +     ++++PQA+R+++P L ++++ LLK++SL   +G  +L+     I+N+T +A+
Sbjct: 162 LNYMTTMVVIIIPQAIRAVLPALGNEFIVLLKDTSLITVIGGKELLYAAQGIMNRTYEAM 221

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L    IYL L ++    + +   ++A  ++
Sbjct: 222 FPLLGVALIYLVLVMLFTRLLAKFERRLAQSDR 254


>gi|241113462|ref|YP_002973297.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861670|gb|ACS59336.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 510

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   ++G+ L++     SR         LP   I T +  GLP +V I           +
Sbjct: 41  VLGVIIGMALAVMGISQSRWLR------LPA-RIYTDVFRGLPAIVTIL----------I 83

Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L I ALS    A+I EI RSG+ +V RGQMEA  AL ++H 
Sbjct: 84  IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSHG 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364
           +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      TG   
Sbjct: 144 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++L  +F YL +++ +  F+N ++A++ L ++
Sbjct: 204 PLLLAGVF-YLVITVPLTHFVNYIDARLRLGKQ 235


>gi|299536214|ref|ZP_07049527.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298728200|gb|EFI68762.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 236

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 69/106 (65%), Gaps = 2/106 (1%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+C  AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL ++++
Sbjct: 102 LNC--AAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFI 159

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            LLK+SSL   +   D++     +   + +  E  ++   +YL L+
Sbjct: 160 ALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYIVAALLYLVLT 205


>gi|288936957|ref|YP_003441016.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|330005624|ref|ZP_08305302.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|288891666|gb|ADC59984.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|328536190|gb|EGF62571.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 231

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 73/119 (61%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           + ++ EF+   +AL    AA+ +E +RSGL A+P GQ EAA ALG+ + +A  LV+LPQ 
Sbjct: 93  NEMNAEFLFSLVALGLCQAAYFSEDIRSGLRAIPEGQNEAARALGMGYLRAMWLVILPQG 152

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +R+ +P + +  + L KN+SLA+ +G  +L  V   I NQT +  E  ++    YL+ S
Sbjct: 153 IRNALPSVINHTVLLFKNTSLAMVIGVTELTYVTRDIENQTFRTFEAYMVATVGYLAFS 211


>gi|312111275|ref|YP_003989591.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|311216376|gb|ADP74980.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 216

 Score = 82.8 bits (203), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 27/180 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T + LPLL I  F  F LP +        L  DK                 F +  +AL
Sbjct: 60  ETIRNLPLLLIIFFTYFALPEV-------GLKLDK-----------------FYAAIVAL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             + +A ++EIVR GL ++ +GQ+EAA + GLT+ +    ++LPQA+R ++PP+ SQ+++
Sbjct: 96  VVFESAMLSEIVRGGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LLK++SLA+ +   +L++    IIN       I I ++   +Y  ++  ++L   RL  K
Sbjct: 156 LLKDTSLAIVIALPELMN-HAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYK 214


>gi|295400875|ref|ZP_06810851.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977138|gb|EFG52740.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 216

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 27/180 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T + LPLL I  F  F LP +        L  DK                 F +  +AL
Sbjct: 60  ETIRNLPLLLIIFFTYFALPEV-------GLKLDK-----------------FYAAIVAL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             + +A ++EIVR GL ++ +GQ+EAA + GLT+ +    ++LPQA+R ++PP+ SQ+++
Sbjct: 96  VVFESAMLSEIVRGGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LLK++SLA+ +   +L++    IIN       I I ++   +Y  ++  ++L   RL  K
Sbjct: 156 LLKDTSLAIVIALPELMN-HAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYK 214


>gi|259502414|ref|ZP_05745316.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259169557|gb|EEW54052.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 497

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 78/123 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  IA+S  + A++AEI+RSG+ AV  GQ+EA+ +LG++ R   R V+LPQA+R+I
Sbjct: 363 PAVIAGIIAISINSGAYVAEIIRSGIQAVSAGQVEASRSLGMSKRLTMRYVVLPQAVRNI 422

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ LLK+SSLA  +G  +L+     + + T + +  + + M IY  L+  +  
Sbjct: 423 WPALGNEFITLLKDSSLASVIGVTELMYQTQLVQSATYKGVLPLGVAMLIYFILTFTLTR 482

Query: 384 FMN 386
            +N
Sbjct: 483 LLN 485


>gi|271500409|ref|YP_003333434.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343964|gb|ACZ76729.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 223

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 81/133 (60%), Gaps = 1/133 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+SP F +   ALS  +AAF AE+ R G++++  GQ E A ALG++   A R V+LPQA+
Sbjct: 87  TLSP-FAAAVTALSAQSAAFYAEVYRGGILSIAEGQWEGAKALGMSRPLALRRVILPQAL 145

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R +IPPL  +   L+K++SLA ++ + +L+     I +Q+ + +EI  +   +Y +L  +
Sbjct: 146 RRMIPPLIERSFELIKSTSLASSLAYGELLYQAMQINSQSFRPLEIYSLAALLYFTLLFV 205

Query: 381 IALFMNRLNAKIA 393
           ++L       +++
Sbjct: 206 LSLLSQYAERRLS 218


>gi|223932682|ref|ZP_03624681.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|223898652|gb|EEF65014.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
          Length = 232

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 71/121 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  Y  A+IAE++R+G+ AVP GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q
Sbjct: 105 ICIGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KN++    +  AD++ +  +        I       F+Y  +   +A +  R+  
Sbjct: 165 VVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEE 224

Query: 391 K 391
           K
Sbjct: 225 K 225



 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  ++    I A  +G + G+   S NK++  I RVYVE ++N P LV    +Y  
Sbjct: 27  GFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIVYYG 86

Query: 152 VLSVLPIPDHSIVLP 166
               LP+  + +++P
Sbjct: 87  ----LPLISNYVLMP 97


>gi|308094386|ref|ZP_05888982.2| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AN-5034]
 gi|308094323|gb|EFO44018.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AN-5034]
          Length = 349

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 67/98 (68%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++
Sbjct: 204 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 263

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 264 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 301


>gi|255281311|ref|ZP_05345866.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Bryantella formatexigens DSM 14469]
 gi|255268268|gb|EET61473.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Bryantella formatexigens DSM 14469]
          Length = 230

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 94/164 (57%), Gaps = 7/164 (4%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           I G P LV I   + +++  P++G        GG  +S   +S  +ALS  + A+I EIV
Sbjct: 62  IRGTPVLVQI---FIVYYGLPMMGIEIPSIMFGGVDIS-RLLSGTVALSVNSTAYICEIV 117

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ ++  GQ E A+ALGL  R+    V+LPQA+++IIP L ++++ ++K SS    +G
Sbjct: 118 RSGIQSIDIGQTEGAMALGLNGRRRMWYVILPQAIKNIIPALANEFVTVIKTSSQVSVIG 177

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            A+L+    TI   + + +E +LI   IY  ++  ++  + R+ 
Sbjct: 178 IAELMYAADTIRGISFRPMEPLLIVAVIYFIITFSLSCVIRRIE 221


>gi|171779738|ref|ZP_02920694.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281840|gb|EDT47274.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 517

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 21/219 (9%)

Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V S VL ++L   + A R+S +        L  LYI   +I GLP LV+++L     +  
Sbjct: 25  VVSMVLALILGGVVTAARMSDNL---LISGLTKLYIE--VIRGLPMLVILSL---FFYGL 76

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P+LG  N    +    +   L  AL+  T   + F+AEI RSG+ AV  GQ E A ++G 
Sbjct: 77  PMLG-LNIPKSTLFGVDLDRLIAALTGLTVGESVFVAEIYRSGIQAVDSGQFEGARSIGF 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +A R V++PQA ++I+P L +++ N +K+SS A  +G ADL+    TI   + +  +
Sbjct: 136 NKFQAYRYVIIPQAFKNILPTLGNEFSNNIKSSSQASVIGVADLMFTASTIQGISYKPFQ 195

Query: 366 IILIWMFIYL----SLSIMIALF---MNRLNAKIALKEK 397
            ++   F+YL    S + ++A +   MNR   ++ L++K
Sbjct: 196 AVIAVGFVYLVFTFSTTRIVAHYERKMNRSAEELTLRDK 234



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SY   IL G + T +L+   M+ A I+G +V A R+S N L++ + ++Y+EV R +P L
Sbjct: 7   ESYGGFILDGALMTVFLSVVSMVLALILGGVVTAARMSDNLLISGLTKLYIEVIRGLPML 66

Query: 143 VVI-FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V++  F Y   +  L IP  ++   FG+ L+
Sbjct: 67  VILSLFFYGLPMLGLNIPKSTL---FGVDLD 94


>gi|299066138|emb|CBJ37321.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 232

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 66/92 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++  AL  + AA++AEIVR+G+ A+PRGQME+A +LGL + +A RLV+LPQA+R+++
Sbjct: 96  QFNTMLTALVVFDAAYLAEIVRAGIQALPRGQMESARSLGLPYLQAMRLVILPQALRNML 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           P L +Q ++ +K +SL   +   ++  V G I
Sbjct: 156 PSLVNQLVSTIKETSLGYIISLPEVSFVAGQI 187


>gi|228477514|ref|ZP_04062150.1| L-cystine transport system permease protein TcyB [Streptococcus
           salivarius SK126]
 gi|228250949|gb|EEK10137.1| L-cystine transport system permease protein TcyB [Streptococcus
           salivarius SK126]
          Length = 217

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 11/163 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV++   + L+F  P +G           P  +  +I  SC +AA++AEI RS + 
Sbjct: 64  GVPMLVVL---FILYFGLPYVG--------VQMPALLCAFIGFSCVSAAYMAEIFRSSIA 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EAA +LGL  +   R ++LPQAMR  + PL +  ++++K+SSLA  +   D+ 
Sbjct: 113 AVDKGQWEAARSLGLPQKSIIRRIILPQAMRIAVAPLGNVIIDMVKSSSLAAMITVPDIF 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I  +    + + ++   IY +LS    L    L  ++A
Sbjct: 173 QNAKIIGGREYDYMSMYILIALIYWTLSFTFELLQGYLEKRLA 215


>gi|332111813|gb|EGJ11793.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 221

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 84/131 (64%), Gaps = 6/131 (4%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S ++  + + AA+ +EI+R+G+ +VP+GQ+ A  A+G+++R+  +LV+LPQA R+++P 
Sbjct: 92  LSAFVTFTLFEAAYYSEIMRAGIQSVPKGQVYAGYAMGMSYRQTMQLVVLPQAFRNMLPV 151

Query: 327 LTSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           L +Q + L +++SL  A+G  DL+    + G   N   + +E  L+   +Y  +   +++
Sbjct: 152 LLTQTIILFQDTSLVYAIGAYDLLKGFEIAGKNFN---RPVETYLVAAVVYFVICFGLSM 208

Query: 384 FMNRLNAKIAL 394
            + RL A+IA+
Sbjct: 209 LVRRLQARIAI 219


>gi|330501774|ref|YP_004378643.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328916060|gb|AEB56891.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 230

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I  + + A +  EI+RSG+ ++P+GQ +A++ALG+T R++   V+LPQA+R+++P
Sbjct: 100 FWSSVITFTLFEACYFCEIIRSGIQSLPKGQTQASMALGMTGRQSLFYVVLPQALRNMLP 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +Q + L +++SL   +   D +     I  + G+ +E+ +    +Y  +S++ +  +
Sbjct: 160 LMLTQTIVLFQDTSLVYILSITDFLGAAAKIAQRDGRLLEMYVFAALVYFVISLLASYAV 219

Query: 386 NRLNAKIAL 394
            RL  ++A+
Sbjct: 220 RRLQKRVAI 228


>gi|270262368|ref|ZP_06190640.1| transporter [Serratia odorifera 4Rx13]
 gi|270044244|gb|EFA17336.1| transporter [Serratia odorifera 4Rx13]
          Length = 220

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 98/178 (55%), Gaps = 15/178 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +Y+S F   G P   LIA  + +++  P  G +F+          F +  I LS  TAA+
Sbjct: 57  IYVSLFR--GTP---LIAQLFMIYYGLPQFGIEFD---------PFPAALIGLSLNTAAY 102

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +E +R+ + ++ +GQ EAA ++G+T  +  R V+LPQA R+ +PPL + ++ L+K++SL
Sbjct: 103 TSETLRAAISSIEKGQWEAAASIGMTRWQTMRRVILPQAARTALPPLGNSFIGLVKDTSL 162

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A  +   +L      I ++T +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 163 AATIQVPELFRQAQLITSRTLEVFTLYLAASLIYWVMATLLSALQNRLEAHVNRQDQE 220


>gi|242243789|ref|ZP_04798233.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis W23144]
 gi|242232757|gb|EES35069.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis W23144]
          Length = 239

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 118/207 (57%), Gaps = 10/207 (4%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    N     T++P  ++  I LS    A+ +EI+R G++++P+GQ EAA ++G+
Sbjct: 88  PELGRLVTNNADNQWTLAP-VVAAVIGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +R+  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + 
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           I L+   +Y  +  +I++      ++I
Sbjct: 207 IYLLVALMYWVVCFVISIIQGWYESRI 233


>gi|153839325|ref|ZP_01991992.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AQ3810]
 gi|260366018|ref|ZP_05778496.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus K5030]
 gi|260898003|ref|ZP_05906499.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus Peru-466]
 gi|149747157|gb|EDM58145.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AQ3810]
 gi|308088044|gb|EFO37739.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus Peru-466]
 gi|308114204|gb|EFO51744.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus K5030]
 gi|328473626|gb|EGF44461.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 365

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 67/98 (68%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++
Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|94986057|ref|YP_605421.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM
           11300]
 gi|94556338|gb|ABF46252.1| amino acid ABC transporter membrane protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 231

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 11/148 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P +VL+++ Y   +  P LG             F +  +AL  Y+AA+ +EIVR GL 
Sbjct: 69  GIPLIVLLSVVY---YGLPALG--------LTLASFPAAVLALGLYSAAYTSEIVRGGLG 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP GQ+EAA +LGL+   A R V+LPQA R  +P L +++++L+  SSLA AV   +L 
Sbjct: 118 SVPIGQIEAARSLGLSRAGALRYVVLPQAWRVALPALGNEFISLILGSSLASAVTLQELF 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + G  I   T +  E+  +   IY  L+
Sbjct: 178 AQGKYITGVTYRQFEVYAVLALIYFLLT 205



 Score = 36.2 bits (82), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 28/43 (65%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + ++GTL+G  R+    L+ W+  +YVEV R IP +V++  +Y
Sbjct: 38  SVMVGTLLGVARVFRMPLLGWLGNIYVEVVRGIPLIVLLSVVY 80


>gi|315604136|ref|ZP_07879202.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313842|gb|EFU61893.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 320

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 23/178 (12%)

Query: 224 ISTFLIFG--LPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCY 276
           I T LIF   LPTL        L F  P LG     +  F   +  +P +M+ +I L   
Sbjct: 111 IYTQLIFWSLLPTLY-----PTLSFGVPFLGSLWGWEIPFDTATYFTPFWMA-FIGLGLN 164

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEI+R+GL++VP+GQ EAA ALG+      R ++LPQAMR I+PP+ ++ +++LK
Sbjct: 165 EGAYLAEIMRAGLLSVPKGQWEAATALGMPRATIFRRIILPQAMRVIVPPIGNETISMLK 224

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL---IWMFIYLSLSIMIALFMNR 387
            +SL  A+ F   ++    I  Q GQA    + +++   IW  +  SL + I  F+ +
Sbjct: 225 TTSLVSAIPFTLELTF---IARQRGQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEK 279


>gi|28872471|ref|NP_795090.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213971203|ref|ZP_03399321.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301382332|ref|ZP_07230750.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060017|ref|ZP_07251558.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302132164|ref|ZP_07258154.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28855726|gb|AAO58785.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213924072|gb|EEB57649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|330874240|gb|EGH08389.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330968062|gb|EGH68322.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 229

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I + +   R SRH+  +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +    + P     F    + ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFDAVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPVG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|266624830|ref|ZP_06117765.1| glutamine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288863291|gb|EFC95589.1| glutamine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 230

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 118/230 (51%), Gaps = 26/230 (11%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224
           F+ +    + T  +    KI  F+ ++GIVL  F   + R  +E T K     A+  +Y+
Sbjct: 13  FIEDNRWKYITDGLQNTLKITFFAVLIGIVLG-FLVAIIRSTYENTHKLKILNAVCTVYL 71

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAE 283
           +  +I G P +V + + Y             F+    ++P  ++  I A    + A++AE
Sbjct: 72  T--VIRGTPVVVQLMIVY-------------FVIFVAINPGMVTTAILAFGINSGAYVAE 116

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG+ ++ RGQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S+A  
Sbjct: 117 IFRSGISSIERGQFEAGRSLGFNYAQTMWYIIMPQAFKNVVPTLANEFIVLLKETSVAGY 176

Query: 344 VGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389
           +G  DL   G  I ++T  A    I + LI++ + +  S ++ L   RL+
Sbjct: 177 IGLQDLTKGGDIIKSRTYSAFMPLIAVALIYLVMVMIFSYLVKLLERRLS 226


>gi|254454756|ref|ZP_05068193.1| ABC transporter permease protein [Octadecabacter antarcticus 238]
 gi|198269162|gb|EDY93432.1| ABC transporter permease protein [Octadecabacter antarcticus 238]
          Length = 225

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +++  I  S  ++AF AE+ R+G++++ +GQ EAA A+G+   +A R ++LPQA++ +IP
Sbjct: 90  YLAAAITFSIQSSAFFAEVFRAGIVSIEKGQWEAARAIGMQRPQAMRRIILPQAVKRMIP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMI 381
             T + + L+K ++L   V +ADL+     +  +T + IE+     LI+ F+   LS+ +
Sbjct: 150 AFTERAIELMKTTTLVATVSYADLLYQANELAQKTFRPIEVFTVTALIYFFVIFGLSLCV 209

Query: 382 ALFMNRL 388
                RL
Sbjct: 210 QAVERRL 216


>gi|167759818|ref|ZP_02431945.1| hypothetical protein CLOSCI_02181 [Clostridium scindens ATCC 35704]
 gi|167662437|gb|EDS06567.1| hypothetical protein CLOSCI_02181 [Clostridium scindens ATCC 35704]
          Length = 230

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 113/210 (53%), Gaps = 20/210 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKY 242
           ++  F+ ++GIVL  F   + R  ++KTGK     A+  LY++  +I G P +V + + Y
Sbjct: 31  RVTFFAVIIGIVLG-FLVAIVRSTYDKTGKLRILNAICKLYLT--VIRGTPVVVQLLIIY 87

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F   G S VS   +++ +A    + A++AEI RSG+++V  GQ EA  +
Sbjct: 88  -----------FVIFGSSDVSKVLVAV-MAFGLNSGAYVAEIFRSGIMSVDNGQFEAGRS 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG  + +    +++PQA ++++P L ++++ LLK +S++  +   DL   G  I ++T  
Sbjct: 136 LGFNYVQTMIYIIMPQAFKNVLPALGNEFIVLLKETSVSGYIALQDLTKGGDIIRSRTYD 195

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A   ++    IYL++ ++    +N L  ++
Sbjct: 196 AFMPLIAVALIYLAMVLIFTKLVNMLERRL 225


>gi|307326880|ref|ZP_07606071.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306887416|gb|EFN18411.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 302

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 76/123 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ +  A+IAE++RSGL+AVP GQ +AA ALGLT  +    + LPQA+R I+PP+ ++
Sbjct: 160 IGLTLHETAYIAELIRSGLLAVPDGQHQAASALGLTPAQIFFRITLPQALRVIVPPMGNE 219

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++LLK +SL   +  ADL+     I  +  Q + ++++    Y+ ++ +I L   RL  
Sbjct: 220 LISLLKATSLVSVITLADLLYSVQLIYAKNFQTVPLLIVAAIWYMIITGVITLLQQRLER 279

Query: 391 KIA 393
           ++ 
Sbjct: 280 RLG 282


>gi|169826053|ref|YP_001696211.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168990541|gb|ACA38081.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 252

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 69/106 (65%), Gaps = 2/106 (1%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+C  AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL ++++
Sbjct: 120 LNC--AAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFI 177

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            LLK+SSL   +   D++     +   + +  E  ++   +YL L+
Sbjct: 178 ALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYMVAALLYLILT 223


>gi|77459026|ref|YP_348532.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77383029|gb|ABA74542.1| amino acid ABC transporter membrane protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 281

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 75/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++AV  GQ EAA ALGL        ++LPQAMR+IIPP TSQ
Sbjct: 152 IALSLNYGAYLSEIFRAGILAVAPGQREAAAALGLRPAATFIHIILPQAMRTIIPPTTSQ 211

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     IY  LSI + L  +RL 
Sbjct: 212 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAAIYWLLSIGLELIQHRLE 270


>gi|146309286|ref|YP_001189751.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145577487|gb|ABP87019.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 256

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 109/205 (53%), Gaps = 17/205 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++  A   V   +L + + +   R SRH++ +   ALP  YI  F   G P LV + L
Sbjct: 46  LTLELVAIAVVAGLILALPMGI--ARASRHWYVR---ALPYGYI--FFFRGTPLLVQLFL 98

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQ 296
            Y        L QF+ +    + P     Y    I ++ +TAA+IAEI+R  + AVP G+
Sbjct: 99  VYY------GLAQFDAVRQGPLWPYLRDPYWCAIITMTLHTAAYIAEILRGAIQAVPPGE 152

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALG++  +A   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  TI
Sbjct: 153 VEAAHALGMSRAQAMLYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTI 212

Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381
           I +T   +EI       YL+++ ++
Sbjct: 213 IARTYLPVEIFFAAGLFYLAIAFVL 237


>gi|320103283|ref|YP_004178874.1| polar amino acid ABC transporter inner membrane subunit [Isosphaera
           pallida ATCC 43644]
 gi|319750565|gb|ADV62325.1| polar amino acid ABC transporter, inner membrane subunit
           [Isosphaera pallida ATCC 43644]
          Length = 577

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 74/121 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  + L+   +A+ AEI R+GL A+PRGQ+EAA ALG+T  +A R V+LPQ +R +
Sbjct: 418 PAIAAGVLGLAINYSAYEAEIYRAGLQAIPRGQLEAARALGMTLFQAIRRVVLPQTVRIV 477

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP+T+ ++ + K++S+   +   +L      + N  G  +E  L    IYL++S+ +A 
Sbjct: 478 VPPVTNDFIAMFKDTSVCSVITLVELTKQYSILSNTQGGVVEFGLAAGAIYLAMSLPLAW 537

Query: 384 F 384
           F
Sbjct: 538 F 538



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++     T +LA + M  A + G ++  GR+   K + W+ R YVEV R  P ++ 
Sbjct: 343 YGPTLIAAAGMTIFLACAAMPLAILAGMVIALGRVYGPKPLDWLLRGYVEVIRGTPLMLQ 402

Query: 145 IFFLY 149
           +FFL+
Sbjct: 403 LFFLF 407


>gi|163800830|ref|ZP_02194730.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175179|gb|EDP59976.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 365

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 67/98 (68%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++
Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|146311433|ref|YP_001176507.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145318309|gb|ABP60456.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Enterobacter sp. 638]
          Length = 258

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 13/163 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV----------- 262
           KTG+A+  +++S F     P LV +   Y   ++       ++I G              
Sbjct: 52  KTGRAVVSVWVSLFR--NTPLLVQLLFWYFAAWNWLPFTLRDYINGEHTWSILPGDVWWF 109

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +PEF+     L  +T+AF+ E + SGL AV RGQ +AA+A G +  +  R +LLPQ +  
Sbjct: 110 TPEFLCSAWGLGVFTSAFLVEEIESGLQAVSRGQRQAALAQGFSSWQLFRFILLPQGLAH 169

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              P+  QYLNL+K SSLA  +GFA+L      I +    A+E
Sbjct: 170 AWQPVVGQYLNLMKLSSLASGIGFAELTYQVRQIESYNAHALE 212



 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 37/69 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF+ T W+  +GM+ A+ +  L    R +  K    +  V+V +FRN P LV + F 
Sbjct: 18  LLSGFLTTLWVTLAGMVIASGLAILFLLLRTAGGKTGRAVVSVWVSLFRNTPLLVQLLFW 77

Query: 149 YKSVLSVLP 157
           Y +  + LP
Sbjct: 78  YFAAWNWLP 86


>gi|111017996|ref|YP_700968.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110817526|gb|ABG92810.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 330

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 4/158 (2%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           QL    P + QF  I    ++  F+   I L    AA++AEIVR+G+ +V  GQ EA++A
Sbjct: 138 QLDLGIPFVHQFVHIDLQGINAAFLFAVIGLGLNEAAYMAEIVRAGVNSVAEGQTEASVA 197

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTG 361
           LG+T  +  R  +LPQAMR IIPP  ++ +++LK +SL  AV ++ +L      I     
Sbjct: 198 LGMTWSQTMRRTVLPQAMRVIIPPTGNELISMLKTTSLVTAVPYSLELYGRARDISGANF 257

Query: 362 QAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALKE 396
           Q I ++++   W     SL ++   ++ R  +K A ++
Sbjct: 258 QPIPLLMVAATWYLAITSLLMIGQFYLERYYSKGASRK 295


>gi|311103256|ref|YP_003976109.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 3 [Achromobacter
           xylosoxidans A8]
 gi|310757945|gb|ADP13394.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 3
           [Achromobacter xylosoxidans A8]
          Length = 257

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 18/211 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +VFS +LG VL +  T  SR  +       +  + +PLL       F LP L+  A    
Sbjct: 49  WVFSLLLGSVLGVMRTASSRLMNALGATYVEVFRNIPLLVQMFLWYFVLPELLPHAWGLA 108

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +       GQF            +   + L  Y +A +AE +R+G+ ++PRGQ +A  AL
Sbjct: 109 MKQMPQPWGQF------------VPAVLCLGFYGSARVAEQLRAGIQSLPRGQFQAGTAL 156

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LP+A R ++PPLTS+++  +K SS+A+ +G  +L     ++   +   
Sbjct: 157 GLTEAQVYRYVILPEAFRIVLPPLTSEFMGTIKYSSVALTIGLLELTGQARSMAEFSFHI 216

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E       IYL ++ ++ L M  L   +A+
Sbjct: 217 FEAFSAATVIYLIINGIVVLGMRMLERHVAV 247



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 4/92 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   I +G   T  LA +  + + ++G+++G  R ++++L+  +   YVEVFRNIP LV
Sbjct: 29  TFLQTIFIGVGWTLALALTAWVFSLLLGSVLGVMRTASSRLMNALGATYVEVFRNIPLLV 88

Query: 144 VIFFLYKSVLSVLP----IPDHSIVLPFGMFL 171
            +F  Y  +  +LP    +    +  P+G F+
Sbjct: 89  QMFLWYFVLPELLPHAWGLAMKQMPQPWGQFV 120


>gi|311742428|ref|ZP_07716237.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Aeromicrobium marinum DSM 15272]
 gi|311314056|gb|EFQ83964.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Aeromicrobium marinum DSM 15272]
          Length = 285

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 75/128 (58%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L + L  Y  + +AE  R+G+ AVP GQ+EAA ALGL      R+V LPQA++ ++P L 
Sbjct: 142 LVVGLILYNGSVLAETFRAGMNAVPTGQVEAAYALGLRKNAVMRIVQLPQAIKIMLPALV 201

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           SQ +  LK++SL   +    L   G  I N+ G  ++  L+   IY+ L+++++LF   L
Sbjct: 202 SQCIVALKDTSLGYYIVAPGLTYAGRQIWNEFGNRLQTALVLAAIYIVLNLLLSLFATWL 261

Query: 389 NAKIALKE 396
             +++ KE
Sbjct: 262 QKRLSSKE 269



 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 32/47 (68%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           ++ A + G +  AG+LS +++V W C V VE FR +P L++IFF++ 
Sbjct: 84  IVGALLFGVVFAAGKLSDHRVVRWPCWVVVEFFRAVPLLMLIFFVWS 130


>gi|83593423|ref|YP_427175.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83576337|gb|ABC22888.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 243

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 61/86 (70%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + + C+T+A +AE +R+G+  +PRGQ  A+ ALGLT  +  R +LLP A+R ++P
Sbjct: 108 FYTSVVGIGCFTSARVAEQIRAGITTLPRGQAMASTALGLTLPQTYRYILLPMALRIVLP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
           PLTS++LN +KN+S+A+ +   +L +
Sbjct: 168 PLTSEFLNTVKNTSVALTISLMELTA 193


>gi|84494729|ref|ZP_00993848.1| putative ABC transporter permease protein [Janibacter sp. HTCC2649]
 gi|84384222|gb|EAQ00102.1| putative ABC transporter permease protein [Janibacter sp. HTCC2649]
          Length = 274

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 83/130 (63%), Gaps = 5/130 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + +++IAL    +A++AE +R+G+ AVP GQ+EAA +LG+    ATR ++LPQA R I P
Sbjct: 141 YGTVWIALGLVASAYMAETIRAGIQAVPPGQIEAARSLGMPAGVATRKIVLPQAFRVITP 200

Query: 326 PLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           PLT++ + L+K+SSL   +G +    +L   G  + N T   +  +++  F YL +++ +
Sbjct: 201 PLTNEIILLVKDSSLVYVLGLSTTGYELTKYGRDLAN-TNANLTPLVVAGFCYLVITLPL 259

Query: 382 ALFMNRLNAK 391
           ++ + R+ A+
Sbjct: 260 SILVRRMEAR 269


>gi|289167714|ref|YP_003445983.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           B6]
 gi|288907281|emb|CBJ22116.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           B6]
          Length = 227

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 104/183 (56%), Gaps = 7/183 (3%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           PL++++   ++   G P +V I + + L H + P + Q   +G        +   + +S 
Sbjct: 48  PLIWLANLYVWIFRGTPMMVQIMIAFALMHINAPTI-QVGILGVDL--SRLIPGILIISM 104

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A+I+E VR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++
Sbjct: 105 NSGAYISETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITII 164

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+SSL  A+G  +L +   T+   T   +  +L   F YL ++ ++ + +      +   
Sbjct: 165 KDSSLLSAIGVMELWNGAITVSATTYLPLTPLLFAAFYYLIMTSILTVTLKSFENYMGQG 224

Query: 396 EKK 398
           +KK
Sbjct: 225 DKK 227


>gi|229056201|ref|ZP_04195627.1| Amino acid ABC transproter, permease [Bacillus cereus AH603]
 gi|228721135|gb|EEL72667.1| Amino acid ABC transproter, permease [Bacillus cereus AH603]
          Length = 230

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 25/226 (11%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++PTL      T+       VF  ++G++ + F  R+S   + K   ++  +YI+  +I 
Sbjct: 8   TYPTLLKATIVTLQLTLTSLVFGSLIGLLFAFF--RIS---NNKILNSIAHVYIA--IIR 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + 
Sbjct: 61  GTPLIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQ 108

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L 
Sbjct: 109 SVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELW 168

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             G +I     Q ++  +I    YL+L ++    ++ L  ++  KE
Sbjct: 169 GSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEKRLQRKE 214


>gi|227823794|ref|YP_002827767.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227342796|gb|ACP27014.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 245

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 19/232 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           P   +LN    S PTL          + + SFVLG+ L L  T L R F      A+   
Sbjct: 19  PLPNWLNLMAESLPTLLWAGLIFTVPLTLLSFVLGLSLGL-VTALVRLFAPAPFVAVARF 77

Query: 223 YISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  ++I G P LV L  + Y L     +L  F             +  I  +    A+ 
Sbjct: 78  YV--WVIRGTPLLVQLFVIFYGLPSMNILLDAFP------------AALIGFTLNIGAYT 123

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+ + +VPRGQ EAA ++G++  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 124 SEIIRATISSVPRGQWEAAYSIGMSWSQVMRRTILPQATRVAVPPLSNTFISLVKDTSLA 183

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A+   +L      I+  T + + + +    IYL++S +++    RL  + A
Sbjct: 184 AAITVPELFQTAQRIVATTYEPLILYIEAALIYLAMSSVLSALQVRLEKRFA 235


>gi|111225075|ref|YP_715869.1| glutamate permease [Frankia alni ACN14a]
 gi|111152607|emb|CAJ64348.1| Glutamate permease [Frankia alni ACN14a]
          Length = 305

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 34/180 (18%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLP 233
           T+       VF+ VLG+ L++   R+SRH   +          ++LP+L +  F   GLP
Sbjct: 73  TLRAALTAMVFAVVLGVALAM--ARMSRHRAVRIPATAVVELFRSLPVLMLILFAYLGLP 130

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                AL ++L                     F +L + L+ Y  A I+EI R+G+ ++ 
Sbjct: 131 -----ALGWKLS-------------------AFWALVLGLTAYNGAVISEIFRAGIASID 166

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA ALGL   +  RL+  PQA+R + P L SQ + LLK++SL   + +++L+  G
Sbjct: 167 RGQTEAAAALGLRPVQVFRLIQFPQAVRRMSPTLISQLVTLLKDTSLGFVIAYSELLRSG 226



 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 33/58 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G ++T   A + M+ A ++G  +   R+S ++ V       VE+FR++P L++I F Y
Sbjct: 69  GLLDTLRAALTAMVFAVVLGVALAMARMSRHRAVRIPATAVVELFRSLPVLMLILFAY 126


>gi|330832442|ref|YP_004401267.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|329306665|gb|AEB81081.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 232

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 71/121 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  Y  A+IAE++R+G+ AVP GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q
Sbjct: 105 ICVGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KN++    +  AD++ +  +        I       F+Y  +   +A +  R+  
Sbjct: 165 VVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEE 224

Query: 391 K 391
           K
Sbjct: 225 K 225



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  ++    I A  +G + G+   S NK++  I RVYVE ++N P LV    +Y  
Sbjct: 27  GFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIVYYG 86

Query: 152 VLSVLPIPDHSIVLP 166
               LP+  + +++P
Sbjct: 87  ----LPLISNYVLMP 97


>gi|321312271|ref|YP_004204558.1| glutamine ABC transporter permease [Bacillus subtilis BSn5]
 gi|320018545|gb|ADV93531.1| glutamine ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 218

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 98/181 (54%), Gaps = 27/181 (14%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T + LPLL I  F  F LP    I +K +             I  + ++        AL
Sbjct: 60  ETIRNLPLLLIIFFTFFALPE---IGIKLE-------------ITAAAIT--------AL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + +A ++EI+RSGL ++ +GQ+EAA + GL++ +    +++PQA+R ++PP+ SQ+++
Sbjct: 96  TIFESAMLSEIIRSGLKSIDKGQIEAARSSGLSYTQTLFFIVMPQALRRMVPPIVSQFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390
           LLK++SLAV +   +L+     I  Q+        I L+   +Y +++  ++L   RL  
Sbjct: 156 LLKDTSLAVVIALPELIHNAQIINGQSADGSYFFPIFLLAALMYFAVNYSLSLAARRLEV 215

Query: 391 K 391
           +
Sbjct: 216 R 216



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T ++AF  +I +   G + G  R +   +++ +  V VE  RN+P L++IFF +
Sbjct: 18  GFLVTLYVAFISIILSFFFGLIAGTLRYAKVPVLSQLIAVLVETIRNLPLLLIIFFTF 75


>gi|313617589|gb|EFR89902.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua
           FSL S4-378]
          Length = 486

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|311106717|ref|YP_003979570.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 11 [Achromobacter
           xylosoxidans A8]
 gi|310761406|gb|ADP16855.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 11
           [Achromobacter xylosoxidans A8]
          Length = 229

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 14/178 (7%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVSPEFMSLY------------IALSCYTA 278
           P   L+    + H + P+L Q  F + G   + PE   ++            IAL+  +A
Sbjct: 47  PCRWLVDAYVEYHRNVPLLVQVLFWYFGMPELLPEGFRMWLYQHNAEMSLAAIALALGSA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAE +RSGL A+P  Q EAA ALG ++ +  R V++PQA+R  IPPL  + L L KN+
Sbjct: 107 AYIAEDIRSGLRAIPFTQFEAARALGASYLQCMRFVIVPQAVRISIPPLVGRALLLFKNT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           S+A+A+G  +L      I N+T +          +YL  S +I L  +R+  +  L  
Sbjct: 167 SVAMAIGVMELTYQAREIENETYRTFATFGAATIMYLLGSFLIMLIGSRIYDRYRLNR 224


>gi|312139384|ref|YP_004006720.1| glutamate abc transporter integral membrane subunit glud
           [Rhodococcus equi 103S]
 gi|325672735|ref|ZP_08152431.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Rhodococcus equi ATCC 33707]
 gi|311888723|emb|CBH48035.1| putative glutamate ABC transporter integral membrane subunit GluD
           [Rhodococcus equi 103S]
 gi|325556612|gb|EGD26278.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Rhodococcus equi ATCC 33707]
          Length = 307

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 21/166 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFD 247
           VF+ +LG +L +   RLS H   +        ++S  ++     +P L+L+   YQ    
Sbjct: 82  VFALILGAILGI--GRLSDHRWVR--------WLSGAIVEFFRAIPVLILMIFAYQ---- 127

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                Q+     S ++    ++ + L+ Y  + IAEI+R+G++++P+GQ EAA ALG+  
Sbjct: 128 --AFAQYGVFPSSQLA--LAAVVVGLTLYNGSVIAEIIRAGILSLPKGQTEAASALGMRK 183

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            +  RL+LLPQA+ +++P L SQ +  LK+S+L   +G+ +L+  G
Sbjct: 184 SQMMRLILLPQAITTMLPALVSQMVVALKDSALGYQIGYIELIRSG 229



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 17/129 (13%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R+ N  + I+  ++L  + L+ +N + +N +                 E D+   P+   
Sbjct: 17  RIRNRIIAIVFGIVLVALALYVLNVLADNGQ----------------LEADK-WSPFLDH 59

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            ++ T +L G   T   A   ++ A I+G ++G GRLS ++ V W+    VE FR IP L
Sbjct: 60  FTWTTYLLPGLKGTLLAAALSIVFALILGAILGIGRLSDHRWVRWLSGAIVEFFRAIPVL 119

Query: 143 VVIFFLYKS 151
           +++ F Y++
Sbjct: 120 ILMIFAYQA 128


>gi|288935884|ref|YP_003439943.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288890593|gb|ADC58911.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 243

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 113/212 (53%), Gaps = 23/212 (10%)

Query: 189 IFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245
           +F+ SF+LG VL+L   A R+S H+   +G A         LIF G P L+ + L Y   
Sbjct: 25  LFICSFILGGVLALGVLALRMS-HWPLASGFA-----KGYILIFRGSPLLIQLFLIYY-- 76

Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                LGQF  I  S + P     F+   +AL+  TAA+ AEI+R GL+A+P GQ+EA  
Sbjct: 77  ----GLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQ 132

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T 
Sbjct: 133 ACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTY 192

Query: 362 QAIEIILIWMFIYLSLSIMI----ALFMNRLN 389
           + +E+ L    IYL L+ +I    AL   RL 
Sbjct: 193 RTMEVFLCAAAIYLLLNFIIVQLYALLERRLT 224


>gi|256750907|ref|ZP_05491791.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750242|gb|EEU63262.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 220

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 63/86 (73%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG+TH  A R V++PQA+++I
Sbjct: 86  PAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHTMAMRYVIIPQAIKNI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           +P L ++++ +LK S++   +GFADL
Sbjct: 146 LPALGNEFIVMLKESAIISVIGFADL 171


>gi|16801415|ref|NP_471683.1| hypothetical protein lin2352 [Listeria innocua Clip11262]
 gi|16414875|emb|CAC97579.1| lin2352 [Listeria innocua Clip11262]
          Length = 486

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|270264106|ref|ZP_06192373.1| transporter [Serratia odorifera 4Rx13]
 gi|270041755|gb|EFA14852.1| transporter [Serratia odorifera 4Rx13]
          Length = 246

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           ++P   +   A     S + G+  ++  T L        G A  LL         +P ++
Sbjct: 17  TWPDGPLGGAALTLAISLMAGVASAVLGTLLGVALAMSRGVAAGLLAAVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P+L   +        PE  ++  AL+   +A++A  V++G++A+  GQ
Sbjct: 77  LI---FWTYFLLPILFGVDI-------PEITTVVCALALIASAYLAHAVKAGIVAIGPGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LGLT  +  R+++LPQA+R ++P   +Q+++L+K++SLA  VG ++L  +   +
Sbjct: 127 WQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVSELTFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            N++    +E+ L    +Y    + + L  N +N +++ + +
Sbjct: 187 NNRSMVYPMEVFLFVALVYFVFCLALDLLANAVNRRLSPQAR 228


>gi|283956347|ref|ZP_06373827.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792067|gb|EFC30856.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 1336]
          Length = 261

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 73/121 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LSC++AA++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q
Sbjct: 138 IILSCFSAAYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQ 197

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + NL+K+SSL   +   +L      I + T   +E  +I    YL L++ I +F   L  
Sbjct: 198 FANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLVLTLPINIFSRYLER 257

Query: 391 K 391
           K
Sbjct: 258 K 258



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 42/82 (51%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + +
Sbjct: 39  CSFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 98

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           +   Y+E+ R  P LV +  +Y
Sbjct: 99  LSIFYIELIRGTPLLVQVLLIY 120


>gi|56420514|ref|YP_147832.1| glutamine ABC transporter permease [Geobacillus kaustophilus
           HTA426]
 gi|56380356|dbj|BAD76264.1| glutamine ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
          Length = 216

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 35/209 (16%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHE--KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           FVF  ++G++       LS+      +T + LPLL I  F  F LP       +  L  D
Sbjct: 34  FVFGIIIGVIRYTKIPVLSQLLAVLVETIRNLPLLLIIFFTYFALP-------EVGLKLD 86

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           K                    +Y A+S    + +A ++EIVRSGL ++ +GQ+EAA + G
Sbjct: 87  K--------------------MYAAISALVIFESAMLSEIVRSGLQSIDKGQIEAARSSG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQ 362
           LT+ +    ++LPQA+R ++PP+ SQ+++LLK++SLA+ +   +L++    IIN      
Sbjct: 127 LTYMQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMN-HAQIINGRNVNF 185

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I I ++  F+Y  ++  ++L   RL  +
Sbjct: 186 VIPIFILVAFMYFIVNYSLSLLSRRLEYR 214



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)

Query: 84  SYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           +YA A    +L GF+ T  +AF  ++ + + G ++G  R +   +++ +  V VE  RN+
Sbjct: 6   AYAPAHLKFLLQGFLVTLEVAFISIVLSFVFGIIIGVIRYTKIPVLSQLLAVLVETIRNL 65

Query: 140 PPLVVIFFLY 149
           P L++IFF Y
Sbjct: 66  PLLLIIFFTY 75


>gi|13473618|ref|NP_105186.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14024368|dbj|BAB50972.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 269

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 73/109 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   +AFI+E+ R+G+ AV +GQ+EAA ALGL+  +  RL++ PQA+R+I+PPL + 
Sbjct: 142 MALTIGYSAFISEVFRAGIQAVEKGQIEAAKALGLSRTQRFRLIVFPQAIRTILPPLGND 201

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           ++ L+K+SSL   +G AD+  +G      + +  E   I  +IYL L++
Sbjct: 202 FVALVKDSSLVSVLGVADITQMGKIYAAGSFRFFETYSIVAYIYLILTV 250


>gi|224367958|ref|YP_002602121.1| GltJ1 [Desulfobacterium autotrophicum HRM2]
 gi|223690674|gb|ACN13957.1| GltJ1 [Desulfobacterium autotrophicum HRM2]
          Length = 242

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 109/208 (52%), Gaps = 19/208 (9%)

Query: 193 SFVLGIVLSLFA---TRLSRHFHEKTG---KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           S ++GI++  F     R  R F E      + +PLL    F  F +PTL+    +  ++ 
Sbjct: 38  SLLMGIIIGTFRITRNRPLRIFAEAYTEFFRDIPLLVQLFFWYFAMPTLLPEQTRIWMYQ 97

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P     NF        EF  + + LS Y+++ +AE +R+G+ ++   Q+ AA++ G +
Sbjct: 98  EIP-----NF--------EFWIVVVGLSLYSSSRMAEQIRAGINSISPDQLNAALSSGFS 144

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H +A R ++LP A+R +IPPLT++ L + KN++LA+ VG  +   +   +   T   +E 
Sbjct: 145 HYQAYRYIILPLAVRLVIPPLTTEALTVFKNTALAMTVGVLETTFMSQQVEAYTFHGLEA 204

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 IY+ +++++   M  L  K+A+
Sbjct: 205 TTAACIIYMIITLVVVGIMGLLEKKLAI 232



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y   +L G   T  L       + ++G ++G  R++ N+ +      Y E FR+IP 
Sbjct: 13  EEPYGGWLLSGVATTVKLGIICCFLSLLMGIIIGTFRITRNRPLRIFAEAYTEFFRDIPL 72

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +FF Y ++ ++LP
Sbjct: 73  LVQLFFWYFAMPTLLP 88


>gi|254451333|ref|ZP_05064770.1| peptidyl-dipeptidase Dcp protein [Octadecabacter antarcticus 238]
 gi|198265739|gb|EDY90009.1| peptidyl-dipeptidase Dcp protein [Octadecabacter antarcticus 238]
          Length = 960

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 77/127 (60%), Gaps = 2/127 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+   +AFIAE+ R+GL ++ +GQ+EAA ALGL+  +  R ++ PQA R I+PPL + 
Sbjct: 138 IALTIGYSAFIAEVFRAGLQSIEKGQIEAAEALGLSPWRRFRHIVFPQAFRRILPPLGND 197

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K+SSL   +G  D+   G        +  E   +   IYL+++I ++L + RL  
Sbjct: 198 FIAMVKDSSLVSVLGVLDVTQAGKITAAGNFRYFESYNVLALIYLTMTIGLSLGLRRLEH 257

Query: 391 KIALKEK 397
              L+EK
Sbjct: 258 H--LREK 262


>gi|260461455|ref|ZP_05809702.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259032525|gb|EEW33789.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 226

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 14/202 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SFVLG+ + L A  L R F  K   AL   Y+  F   G P LV +   + + +  P 
Sbjct: 28  LLSFVLGLTVGLGAA-LGRLFGPKPLVALVRFYVWIFR--GTPLLVQL---FLIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G+T  +A
Sbjct: 82  VG--------ILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R  +LPQA R  +PPL++ +++L+K++SLA A+   ++      I+  T + + + +  
Sbjct: 134 MRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVATTYEPLILYVEA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             +YL++S +++    RL  ++
Sbjct: 194 AILYLAMSSVLSALQTRLEERL 215


>gi|227833322|ref|YP_002835029.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184306|ref|ZP_06043727.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454338|gb|ACP33091.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 312

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 20/189 (10%)

Query: 170 FLNNRGLS---FPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           FLNN+  +    P L  T+ + A   V + V GI+  L   RLS +   +      L  +
Sbjct: 56  FLNNQTWTTYLLPGLRGTILSAAASIVLAIVFGIIFGL--GRLSENVFVRG-----LCGV 108

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  +P L+L+   YQL         ++ +    ++  F ++  AL+ Y  + +AEI
Sbjct: 109 VVEFFRAIPVLLLMIFAYQL------FAIYDVVPSKQLA--FSAVVFALTLYNGSVVAEI 160

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ ++P+GQ EAA ALGL+H +  R +LLPQA+ +++P L +Q +  LK+S+L   +
Sbjct: 161 LRSGIKSLPKGQTEAARALGLSHGQTMRTILLPQAVAAMLPALIAQMVIALKDSALGYQI 220

Query: 345 GFADLVSVG 353
           G+ ++V  G
Sbjct: 221 GYVEVVRSG 229



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 26/151 (17%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      +  N+   II A+L   +  W ++                 L ER  
Sbjct: 4   RATVLYDAPGPKGKRRNLIYTIITAVLSVAVLYWVLST----------------LGERG- 46

Query: 70  FEIDQGI-VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            ++D  +  P+ ++ ++ T +L G   T   A + ++ A + G + G GRLS N  V  +
Sbjct: 47  -QLDSALWTPFLNNQTWTTYLLPGLRGTILSAAASIVLAIVFGIIFGLGRLSENVFVRGL 105

Query: 129 CRVYVEVFRNIPPLVVIFFLYK--SVLSVLP 157
           C V VE FR IP L+++ F Y+  ++  V+P
Sbjct: 106 CGVVVEFFRAIPVLLLMIFAYQLFAIYDVVP 136


>gi|320008164|gb|ADW03014.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 228

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 81/139 (58%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG      F    + LS YTAAF+ E +RSG+  VP GQ EAA ALGL+  +  RL++LP
Sbjct: 90  GGDFEVINFRLAVLGLSLYTAAFVCEALRSGINTVPAGQAEAARALGLSFTQVLRLIILP 149

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R+++ PL +  + L KN+++A A+G  +   +   +I    Q I I  ++ F ++ L
Sbjct: 150 QAFRAVVNPLANVLIALTKNTTVAAAIGVVEAAYLMKDMIEAEAQLILISAVFAFGFICL 209

Query: 378 SIMIALFMNRLNAKIALKE 396
           ++   L +  ++ K+A+K 
Sbjct: 210 TLPTGLLLGWVSKKVAVKR 228


>gi|222087540|ref|YP_002546077.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221724988|gb|ACM28144.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 274

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 77/128 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    AAFIAE+ R+G+ AV  GQ+EAA ALGL+  +  R V+ PQA R I PPL++ 
Sbjct: 147 VALMIAYAAFIAEVFRAGIQAVDPGQIEAAKALGLSRYRRFRHVIAPQAFRVIFPPLSND 206

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K+SSL   +G AD+  +     + + +  E   I  +IYL L+I ++L + +   
Sbjct: 207 FIAMVKDSSLVSVLGVADITQLAKIYSSGSFRYFESYSILAYIYLILTIGLSLVLRKFEK 266

Query: 391 KIALKEKK 398
           ++  +  +
Sbjct: 267 RMRERHMR 274


>gi|213965269|ref|ZP_03393466.1| ABC-type amino acid transport system, permease component
           [Corynebacterium amycolatum SK46]
 gi|213952121|gb|EEB63506.1| ABC-type amino acid transport system, permease component
           [Corynebacterium amycolatum SK46]
          Length = 326

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 85/141 (60%), Gaps = 4/141 (2%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           + +S  F+  ++ L    +A++AEIVR+G+ AVP GQ EA+ ALG++  +  R  +LPQA
Sbjct: 150 TVLSNTFVLAFVGLGLNESAYMAEIVRAGIQAVPEGQTEASKALGMSWWQTVRRTILPQA 209

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI---WMFIYL 375
           MR IIPP  +++++LLK +SL +AV F+ +L      I N     + ++L+   W  +  
Sbjct: 210 MRIIIPPTGNEFISLLKTTSLVIAVPFSLELYGRSTDIANALFLPVPMLLVAATWYLVIT 269

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           S+ ++   ++ R  A+ A ++
Sbjct: 270 SILMVGQFYLERYFARGATRQ 290


>gi|294083905|ref|YP_003550662.1| amino acid ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663477|gb|ADE38578.1| amino acid ABC transporter permease protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 287

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 77/128 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  + L+ +  +F AEI+R G+ AV RGQ EAA A GL+     R V++PQA+  I+
Sbjct: 156 RFWAGVLCLAAFEGSFAAEIIRGGIQAVERGQYEAADATGLSKFDKYRYVIVPQALPLIL 215

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLT   ++L+K+S++   +  A+L + G  +I+ T  A EI  I   +YL L+  +++ 
Sbjct: 216 PPLTGLLISLIKHSAIVSVIAVAELTTEGLNLISDTYMAFEIWFIVAGMYLVLTTSLSVM 275

Query: 385 MNRLNAKI 392
           +N L  K+
Sbjct: 276 VNILEVKM 283


>gi|217963588|ref|YP_002349266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes HCC23]
 gi|217332858|gb|ACK38652.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes HCC23]
 gi|307571836|emb|CAR85015.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Listeria monocytogenes L99]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|242240917|ref|YP_002989098.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132974|gb|ACS87276.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 292

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 113/212 (53%), Gaps = 9/212 (4%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKP 249
           V +  LGI+  + A  +    H      L  + +    IF G P ++ + L + L    P
Sbjct: 84  VLAMALGILFGVIAAIM----HMSPNPVLHYVSVGYAWIFRGTPLILQLLLWFNLALVFP 139

Query: 250 VL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            +   G F+    + ++P F +L + LS    A+ +E+VR+GL++V  GQ EAA A+G+ 
Sbjct: 140 RITLPGVFSVETVTVMTPFFAAL-LGLSINQGAYTSEVVRAGLLSVDIGQYEAAKAIGMP 198

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R ++LPQAMR IIPP+ +++++++K +SLA  + +++L+     I     + +E+
Sbjct: 199 RLQALRRIILPQAMRVIIPPVGNEFISMIKTTSLASMIQYSELLYNTQNIYYANARVMEL 258

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +    YL +  +++   NRL    +   ++
Sbjct: 259 LFVAGIWYLMVVTVLSFGQNRLEKYFSRGNRR 290


>gi|167589679|ref|ZP_02382067.1| glutamine ABC transporter permease protein [Burkholderia ubonensis
           Bu]
          Length = 218

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 17/186 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            FV+G++  +F     R +  K    L  +YI   LI G P +V +     L+F  P+L 
Sbjct: 33  GFVVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 82

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                G         +  IA++  + A++AE+VR  L+++P+G  EA +A+GL+  +   
Sbjct: 83  HIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLL 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI      
Sbjct: 136 KVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAV 195

Query: 373 IYLSLS 378
           IYL L+
Sbjct: 196 IYLMLT 201


>gi|33599319|ref|NP_886879.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33575365|emb|CAE30828.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 252

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 264 PE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           PE  F +  +++  Y +A I E +R+G+ A+P GQ +A +ALGLT  +  R VLLP A+R
Sbjct: 104 PEGSFYTAALSIGVYMSARIGEQLRAGIEALPPGQRQAGLALGLTLPQLYRHVLLPNALR 163

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P +TS  LN +KN+S+A+ +G ADL +    +   + Q  E  L     YL+L++++
Sbjct: 164 MVLPTMTSDCLNTIKNTSVALTIGLADLTAQAHAMQEYSFQVFEAFLTATVAYLALNLIV 223

Query: 382 ALFMNRLNAKIALKEKK 398
            + M  L   +++  + 
Sbjct: 224 IVAMRALERWVSIPGQS 240



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP--IPDHSIVLPFGMF 170
           VG  R     LV  +  VYVEVFRNIP +V +F  Y  +  +LP  + D    LP G F
Sbjct: 50  VGVARTLPYPLVKRLAAVYVEVFRNIPLIVQMFLWYFVLPELLPKALGDWIKQLPEGSF 108


>gi|33595039|ref|NP_882682.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33565116|emb|CAE35911.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis]
          Length = 252

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 80/133 (60%), Gaps = 2/133 (1%)

Query: 264 PE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           PE  F +  +++  Y +A I E +R+G+ A+P GQ +A +ALGLT  +  R VLLP A+R
Sbjct: 104 PEGSFYTAALSIGVYMSARIGEQLRAGIEALPPGQRQAGLALGLTLPQLYRHVLLPNALR 163

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P +TS  LN +KN+S+A+ +G ADL +    +   + Q  E  L     YL+L++++
Sbjct: 164 MVLPTMTSDCLNTIKNTSVALTIGLADLTAQAHAMQEYSFQVFEAFLTATVAYLALNLIV 223

Query: 382 ALFMNRLNAKIAL 394
            + M  L   +++
Sbjct: 224 IVAMRALERWVSI 236



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP--IPDHSIVLPFGMF 170
           VG  R     LV  +  VYVEVFRNIP +V +F  Y  +  +LP  + D    LP G F
Sbjct: 50  VGVARTLPYSLVKRLAAVYVEVFRNIPLIVQMFLWYFVLPELLPKALGDWIKQLPEGSF 108


>gi|332040836|gb|EGI77208.1| polar amino acid ABC transporter inner membrane protein
           [Hylemonella gracilis ATCC 19624]
          Length = 217

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 7/161 (4%)

Query: 238 IALKYQLHFDKPVLGQ-----FNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +A+  Q+    P+L Q     F F + G   SP + +  +AL+ YT+AF+ EI R  + A
Sbjct: 53  VAVYVQVFQGTPLLMQLFLTYFGFALLGLQTSP-WTAAGLALTLYTSAFLTEIWRGCVAA 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA +L ++  +  R V+LPQA+R  IPP     + ++K ++LA  +GF +L  
Sbjct: 112 IPKGQWEAAQSLAMSFTEQLRHVILPQALRIAIPPTVGFLVQVVKGTALASVIGFVELTR 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  I N T Q   +      +Y +L   I+L+   L  K+
Sbjct: 172 AGNMISNVTYQPFTVFACVALLYFALCWPISLYAQTLERKL 212


>gi|270290755|ref|ZP_06196979.1| polar amino acid transport system permease [Pediococcus
           acidilactici 7_4]
 gi|270280815|gb|EFA26649.1| polar amino acid transport system permease [Pediococcus
           acidilactici 7_4]
          Length = 217

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 30/186 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    +FS+VLG +L L      R+     G      + LPLL +  F+ FGLP 
Sbjct: 22  ITIEVSVISIIFSYVLGGILGLIRYLNVRYLSALVGVVIDVIRNLPLLLMFFFVYFGLPN 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L +               +   +  S          +AL+ + +A IAEI+R G++++ +
Sbjct: 82  LGI---------------RLGILPSSI---------LALTVFESAMIAEIIRGGIVSIDK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A A GL++ +A R ++LPQA   +IP L SQ+++L+K++SLA  +   +++    
Sbjct: 118 GQMEGARANGLSYWQAMRYIILPQAQVRMIPALVSQFISLIKDTSLATIIMLPEMMYHAQ 177

Query: 355 TIINQT 360
            I  Q 
Sbjct: 178 IIYGQN 183


>gi|290893601|ref|ZP_06556583.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J2-071]
 gi|290556803|gb|EFD90335.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J2-071]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|271963750|ref|YP_003337946.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270506925|gb|ACZ85203.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 222

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 62/94 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS YTAAF+ E +R+G+  VP GQ EAA A+GLT  +  RL++LPQA+R++I PL S 
Sbjct: 96  IGLSGYTAAFVCEAIRAGINTVPLGQAEAARAIGLTFFQNLRLIVLPQALRAVIAPLGSV 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            + L+KN+++A A+G  +      T+    G A+
Sbjct: 156 LIALIKNTTIAAAIGVGEASLTMKTLFESHGDAV 189


>gi|146321226|ref|YP_001200937.1| amino acid ABC transporter, permease protein [Streptococcus suis
           98HAH33]
 gi|253752083|ref|YP_003025224.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis SC84]
 gi|253753908|ref|YP_003027049.1| amino acid ABC transporter, permease protein [Streptococcus suis
           P1/7]
 gi|253755217|ref|YP_003028357.1| amino acid ABC transporter, permease protein [Streptococcus suis
           BM407]
 gi|145692032|gb|ABP92537.1| amino acid ABC transporter, permease protein [Streptococcus suis
           98HAH33]
 gi|251816372|emb|CAZ52003.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis SC84]
 gi|251817681|emb|CAZ55429.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis BM407]
 gi|251820154|emb|CAR46492.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis P1/7]
 gi|292558666|gb|ADE31667.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus suis GZ1]
 gi|319758450|gb|ADV70392.1| amino acid ABC transporter, permease protein [Streptococcus suis
           JS14]
          Length = 232

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 71/121 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  Y  A+IAE++R+G+ AVP GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q
Sbjct: 105 ICVGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KN++    +  AD++ +  +        I       F+Y  +   +A +  R+  
Sbjct: 165 VVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEE 224

Query: 391 K 391
           K
Sbjct: 225 K 225



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  ++    I A  +G + G+   S NK++  I RVYVE ++N P LV    +Y  
Sbjct: 27  GFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIVYYG 86

Query: 152 VLSVLPIPDHSIVLP 166
               LP+  + +++P
Sbjct: 87  ----LPLISNYVLMP 97


>gi|254826861|ref|ZP_05231548.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL N3-165]
 gi|258599240|gb|EEW12565.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL N3-165]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|126649373|ref|ZP_01721614.1| amino acid ABC transporter (permease) [Bacillus sp. B14905]
 gi|126593698|gb|EAZ87621.1| amino acid ABC transporter (permease) [Bacillus sp. B14905]
          Length = 252

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 69/106 (65%), Gaps = 2/106 (1%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+C  AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL ++++
Sbjct: 120 LNC--AAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLGNEFI 177

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            LLK+SSL   +   D++     +   + +  E  ++   +YL L+
Sbjct: 178 ALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYIVAALLYLILT 223


>gi|120612708|ref|YP_972386.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120591172|gb|ABM34612.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 230

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 83/136 (61%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS+   E +S  I    + AA+ +EI+R+G+ ++PRGQ+ A  ALG+T+ +  ++V+LPQ
Sbjct: 94  GSSYRSE-LSAIITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMKIVILPQ 152

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  D++    T     G+ IE  L+   +Y  + 
Sbjct: 153 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYFMMC 212

Query: 379 IMIALFMNRLNAKIAL 394
             ++  + RL+ KIA+
Sbjct: 213 FALSWAVKRLHRKIAI 228


>gi|302024083|ref|ZP_07249294.1| amino acid ABC transporter, permease protein [Streptococcus suis
           05HAS68]
          Length = 232

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 71/121 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  Y  A+IAE++R+G+ AVP GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q
Sbjct: 105 ICVGLYHGAYIAEVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KN++    +  AD++ +  +        I       F+Y  +   +A +  R+  
Sbjct: 165 VVNLIKNTATVAIISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEE 224

Query: 391 K 391
           K
Sbjct: 225 K 225



 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  ++    I A  +G + G+   S NK++  I RVYVE ++N P LV    +Y  
Sbjct: 27  GFLFTLAISVGAFIMAMFLGIVFGSLSSSINKVLKIIARVYVEYYQNTPLLVQFMIVYYG 86

Query: 152 VLSVLPIPDHSIVLP 166
               LP+  + +++P
Sbjct: 87  ----LPLISNYVLMP 97


>gi|254471177|ref|ZP_05084579.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211959323|gb|EEA94521.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 324

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 73/128 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A++ EI RSG+ ++  GQ EAA ALGL      R V+LPQAMR I+PP  +Q
Sbjct: 197 IALSLVYGAYMTEIFRSGIQSISVGQWEAADALGLQRLLTFRKVILPQAMRVIVPPTGNQ 256

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL   VG  D++ +  T      + +E+++    IY  +S+M+     R+  
Sbjct: 257 FIAMLKDSSLVSVVGVWDIMFIARTQGRSDFKILEMLITASIIYWVMSVMLEFVQQRIEN 316

Query: 391 KIALKEKK 398
             A   K+
Sbjct: 317 HYAKSLKR 324


>gi|183602519|ref|ZP_02963884.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683563|ref|YP_002469946.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190593|ref|YP_002967987.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195999|ref|YP_002969554.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218160|gb|EDT88806.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219621213|gb|ACL29370.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240248985|gb|ACS45925.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250553|gb|ACS47492.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793580|gb|ADG33115.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 328

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I    +   F + +I L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 145 EFWSIDSQAIITAFNAAWIGLALNEAAYLAEIVRAGLDAVDPGQEEAAKALGMKRSMIMR 204

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR IIPP  ++ + +LK +SL +AV F  DL      I N+  + I ++L+  
Sbjct: 205 RVILPQAMRIIIPPTGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRIYKPIPLLLVAS 264

Query: 372 FIYL 375
             YL
Sbjct: 265 IWYL 268


>gi|300763939|ref|ZP_07073935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria
           monocytogenes FSL N1-017]
 gi|300515280|gb|EFK42331.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria
           monocytogenes FSL N1-017]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|46908483|ref|YP_014872.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes str. 4b F2365]
 gi|226224858|ref|YP_002758965.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes Clip81459]
 gi|254825186|ref|ZP_05230187.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J1-194]
 gi|254931637|ref|ZP_05264996.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes HPB2262]
 gi|254992059|ref|ZP_05274249.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J2-064]
 gi|255519729|ref|ZP_05386966.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J1-175]
 gi|46881754|gb|AAT05049.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes serotype 4b str. F2365]
 gi|225877320|emb|CAS06034.1| Putative amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293583191|gb|EFF95223.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes HPB2262]
 gi|293594430|gb|EFG02191.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J1-194]
 gi|328465831|gb|EGF37019.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 1816]
 gi|328472142|gb|EGF43017.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 220]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|332179314|gb|AEE15003.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermodesulfobium narugense DSM 14796]
          Length = 216

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 70/113 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +A++ +T A IAEIVR GL ++ +GQ EAA + G ++ +    ++LPQA+R +
Sbjct: 80  PPIQAAILAMTIFTTAMIAEIVRGGLNSIDKGQWEAAASQGFSYTQTLIYIVLPQAIRKV 139

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           IPPL SQ++  +K++S   AVG  +L   G  I+ Q  +  ++ +++  I L+
Sbjct: 140 IPPLISQFITTIKDTSFTWAVGIEELTGRGMIIMGQYAEPAQVFVLFGMIALT 192


>gi|313607306|gb|EFR83728.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL F2-208]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|254899048|ref|ZP_05258972.1| hypothetical protein LmonJ_04529 [Listeria monocytogenes J0161]
 gi|254912811|ref|ZP_05262823.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937138|ref|ZP_05268835.1| arpJ [Listeria monocytogenes F6900]
 gi|284802697|ref|YP_003414562.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578]
 gi|284995839|ref|YP_003417607.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923]
 gi|258609741|gb|EEW22349.1| arpJ [Listeria monocytogenes F6900]
 gi|284058259|gb|ADB69200.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578]
 gi|284061306|gb|ADB72245.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923]
 gi|293590807|gb|EFF99141.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|314935665|ref|ZP_07843017.1| amino acid ABC transporter, permease protein [Staphylococcus
           hominis subsp. hominis C80]
 gi|313656230|gb|EFS19970.1| amino acid ABC transporter, permease protein [Staphylococcus
           hominis subsp. hominis C80]
          Length = 241

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 94/155 (60%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 36  ITIVTFILGLIIALF-TALMRISSSKVSRGIARVYVS--IIRGTPMIVQL---FIIFYGI 89

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    N     T+S   +S  I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 90  PELGRLITGNADEQWTLS-SVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 148

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +R+  + ++LPQA+R  +P L + +L L+K++SL
Sbjct: 149 NYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSL 183


>gi|224498994|ref|ZP_03667343.1| hypothetical protein LmonF1_04543 [Listeria monocytogenes Finland
           1988]
 gi|254831313|ref|ZP_05235968.1| hypothetical protein Lmon1_08142 [Listeria monocytogenes 10403S]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|16804289|ref|NP_465774.1| hypothetical protein lmo2250 [Listeria monocytogenes EGD-e]
 gi|224500950|ref|ZP_03669257.1| hypothetical protein LmonFR_00275 [Listeria monocytogenes FSL
           R2-561]
 gi|16411720|emb|CAD00328.1| arpJ [Listeria monocytogenes EGD-e]
          Length = 486

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 356 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 446


>gi|310658910|ref|YP_003936631.1| ABC transporter permease [Clostridium sticklandii DSM 519]
 gi|308825688|emb|CBH21726.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Clostridium sticklandii]
          Length = 212

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 75/115 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  IA+S  ++A+IAEI+R+G++AV +GQ EA  +LG+T   A + V+LPQA ++I
Sbjct: 80  PMFVAGVIAMSINSSAYIAEIIRAGIMAVDKGQFEATKSLGMTGAMAYKEVILPQAFKNI 139

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +P L ++++ L+K S++   +G  DL+    TI   T +  E +L+   IY  L+
Sbjct: 140 LPALGNEFIVLIKESAIVSVIGLHDLMYNVDTIRGITYKPFEPLLVAALIYFILT 194


>gi|307244562|ref|ZP_07526667.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306492089|gb|EFM64137.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 224

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 83/130 (63%), Gaps = 4/130 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +A+   + A+IAEI+RSG+ +V +GQMEA+ +LGLT+ ++ R +++PQA+++I+P
Sbjct: 94  FTAAVMAMILNSGAYIAEILRSGISSVDKGQMEASRSLGLTYLQSMRYIIVPQAVKNILP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL----VSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            L +++++L+K S++   VG  D+    +SV  +  N  G  +   LI+  I  +LS ++
Sbjct: 154 ALANEFISLVKESAIVAFVGVTDIMFVAISVKNSTYNGFGPYLFAALIYFVITFTLSKLV 213

Query: 382 ALFMNRLNAK 391
            L   ++  +
Sbjct: 214 GLLEKKMTVE 223


>gi|255262995|ref|ZP_05342337.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62]
 gi|255105330|gb|EET48004.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62]
          Length = 267

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 81/121 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  + +A I+EI R+G+ +V +GQ EAA ++G++  +A R ++LPQ++R ++PPL  +
Sbjct: 144 LTLGVFHSALISEIFRAGINSVDKGQWEAAASIGMSRGQAYRYIILPQSVRFMLPPLFGE 203

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+S++   +  A+L ++G  II+ T  + EI      +YL+L+++++  ++ L  
Sbjct: 204 FVHLIKSSAIVSVIAVAELTTIGRNIISDTYMSFEIWFTIAAVYLALTLVLSFGVSALER 263

Query: 391 K 391
           +
Sbjct: 264 R 264


>gi|222151827|ref|YP_002560987.1| glutamine-binding periplasmic protein homolog [Macrococcus
           caseolyticus JCSC5402]
 gi|222120956|dbj|BAH18291.1| glutamine-binding periplasmic protein homolog [Macrococcus
           caseolyticus JCSC5402]
          Length = 483

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 80/131 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   IAL    AA+IAEI+R+G+ AV +GQMEAA +LGL+H +A   V++PQA++ I+P
Sbjct: 353 FICGAIALVINCAAYIAEIIRAGIKAVDKGQMEAARSLGLSHSQAMNKVIMPQAIKKILP 412

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++++ ++K SS+   +G ++L+     +   +      +LI   +Y  L+  ++  M
Sbjct: 413 ALGNEFITVIKESSIVSVIGVSELMFNAQVVQGASFDPFTPLLIAAVVYFILTFGLSRVM 472

Query: 386 NRLNAKIALKE 396
           N    ++++ +
Sbjct: 473 NVFERRMSVSD 483


>gi|29833088|ref|NP_827722.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29610210|dbj|BAC74257.1| putative polar amino acid ABC transporter ATP-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 281

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 109/199 (54%), Gaps = 19/199 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RGL    LT+   A + V  F LG +L+  A RLS +      +++   Y+  +L   +P
Sbjct: 68  RGL---WLTLWLTAVVMVLGFALGTLLA--AGRLSAN---PVLRSVSWGYV--WLFRSMP 117

Query: 234 TLVLIALKYQLHFDKP-VLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LV + L + +    P +LG    N +G  TV+       + L+ + AA+ AE+VR G++
Sbjct: 118 ILVQLLLWFNIGALYPQILGVKTVNLLGPVTVA------IVGLTLHEAAYAAEVVRGGIL 171

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RGQ+EAA ALGL+  +    ++LPQAMRSI+PP  +  +  LK +S+   +   DL+
Sbjct: 172 SVDRGQIEAAQALGLSRWRRWWRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSVIAVQDLL 231

Query: 351 SVGGTIINQTGQAIEIILI 369
                + ++T Q I ++++
Sbjct: 232 YSVQLVYHRTYQVIPLLMV 250



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +D   + ++L G   T WL    M+    +GTL+ AGRLSAN ++  +   YV +FR++P
Sbjct: 58  ADYFTSASVLRGLWLTLWLTAVVMVLGFALGTLLAAGRLSANPVLRSVSWGYVWLFRSMP 117

Query: 141 PLVVIFF------LYKSVLSV 155
            LV +        LY  +L V
Sbjct: 118 ILVQLLLWFNIGALYPQILGV 138


>gi|51891627|ref|YP_074318.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855316|dbj|BAD39474.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 229

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 25/189 (13%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFD----KPVLGQFNFIGGSTVSPEFM 267
           ++G+A+  LY+S  LI   P +  +   Y L  HFD     P +G               
Sbjct: 53  RSGRAVSRLYVS--LIQNTPLVTQVFFLYYLLPHFDIMLPTPAVG--------------- 95

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              + L  Y  A++ E+VR+G+ A+ RGQ+EAA++ G T+ +A R ++LPQA + ++PP+
Sbjct: 96  --VLGLGVYHGAYMTEVVRAGIQAIHRGQLEAALSQGFTYVQAMRHIILPQATQIVLPPM 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T+Q + L+KNSS+   +   DL+    +    TG      L    IY ++   +A    R
Sbjct: 154 TNQAVALIKNSSILAMISGGDLMFQADSWSASTGYYGPAYLTVWAIYFAICFPLAQLARR 213

Query: 388 LNAKIALKE 396
              ++ L  
Sbjct: 214 WEERVRLSR 222


>gi|172065440|ref|YP_001816152.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171997682|gb|ACB68599.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 297

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 10/225 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           G FL  R +    LT   N  +  V +  LG+VL +  T + R        A+   YI  
Sbjct: 66  GQFLTARSI----LTGLGNTIVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAQGYI-- 118

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEI 284
           +L  G P ++ + L + L    P LG        TV     F++  + L     A+ +E+
Sbjct: 119 WLFRGTPVILQLLLWFNLALVFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEV 178

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+GL++V  GQ EAA ++G+   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V
Sbjct: 179 VRAGLLSVDTGQYEAAKSIGMARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVV 238

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +A+++     I     + IE++++    YL++  +++L   R+ 
Sbjct: 239 QYAEMLHNAQNIYYANARVIELLIVAGIWYLAVVTVLSLAQARVE 283


>gi|260904717|ref|ZP_05913039.1| polar amino acid ABC transporter, inner membrane subunit
           [Brevibacterium linens BL2]
          Length = 220

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 20/133 (15%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTA 278
           PL  +  F  FGLP L        + F            GST S   F+   +AL+ YTA
Sbjct: 61  PLTLVMFFCAFGLPFL-------DIRF------------GSTSSFNSFIYATLALTAYTA 101

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            F+AE +RSG+  +P GQ EAA A+GLT  +    V+LPQA R++IPPL S  + LLKN+
Sbjct: 102 CFVAETLRSGISTIPVGQAEAARAVGLTFGQTLSQVILPQAFRTVIPPLGSVIIALLKNT 161

Query: 339 SLAVAVGFADLVS 351
           S+A A    +L+S
Sbjct: 162 SIASAFNNRELIS 174


>gi|59713573|ref|YP_206348.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114]
 gi|59481821|gb|AAW87460.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114]
          Length = 286

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 4/145 (2%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L L  L  +   D  +L QF F G + +     +  + +   +AA+I E+VRSGL A
Sbjct: 128 VPLLGLENLLREHSGDINLLQQFLF-GSANLWENLTAGVLCIGMISAAYIGEVVRSGLDA 186

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA  LGL+     R ++ PQ  + IIPPL  Q ++L+K+SS+   +   +L  
Sbjct: 187 IPKGQHEAAKTLGLSTWHRYRYIIAPQVFKVIIPPLAGQCISLVKDSSIISLISIQELTF 246

Query: 352 VGGTIINQTGQAIEIILIWMFIYLS 376
           VG  I N +G   E   IW+F+ LS
Sbjct: 247 VGTEIANSSGMIFE---IWIFVALS 268



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
            G +PY  D  ++T  L     TFW    GM+ A   G L+G GR S   ++  +   Y+
Sbjct: 54  DGSLPYFFDGLFSTLRL-----TFW----GMLFAICFGVLLGLGRRSNFTVIRALSNSYI 104

Query: 134 EVFRNIPPLV 143
           ++ RNIPPLV
Sbjct: 105 QLIRNIPPLV 114


>gi|70725641|ref|YP_252555.1| hypothetical protein SH0640 [Staphylococcus haemolyticus JCSC1435]
 gi|68446365|dbj|BAE03949.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 241

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 95/155 (61%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  K +  +Y+S  +I G P +V +   + + +  
Sbjct: 36  ITIVTFILGLIIALF-TALMRISTSKVLKGIARVYVS--IIRGTPMIVQL---FIIFYGI 89

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    N     T+S   +S  I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 90  PELGRLVTGNADEQWTLS-SVISAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 148

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +R+  + ++LPQA+R  IP L + +L+L+K++SL
Sbjct: 149 NYRQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 183


>gi|167038159|ref|YP_001665737.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|320116568|ref|YP_004186727.1| polar amino acid ABC transporter inner membrane subunit
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166856993|gb|ABY95401.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929659|gb|ADV80344.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 220

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 63/86 (73%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG+TH  A R V++PQA+++I
Sbjct: 86  PAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           +P L ++++ +LK S++   +GFADL
Sbjct: 146 LPALGNEFIVMLKESAIISVIGFADL 171


>gi|229174192|ref|ZP_04301727.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
 gi|228609313|gb|EEK66600.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
          Length = 226

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS   AA+++EI+R  L AV  GQM+A +++G+T+++A R ++ PQA+R  +P L + 
Sbjct: 100 IGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTNKQAMRQIIFPQAIRVAVPSLGNN 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK SSL+ A+G A++++    +  Q+ + +E  L    +Y  ++I+I+    +L  
Sbjct: 160 FVGLLKESSLSFALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEK 219

Query: 391 KI 392
           K+
Sbjct: 220 KL 221


>gi|16079799|ref|NP_390623.1| glutamine ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310682|ref|ZP_03592529.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221315005|ref|ZP_03596810.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221319926|ref|ZP_03601220.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221324207|ref|ZP_03605501.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|81815728|sp|O34606|GLNP_BACSU RecName: Full=Probable glutamine ABC transporter permease protein
           glnP
 gi|2635191|emb|CAB14687.1| glutamine ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|28375455|emb|CAA93320.1| integral membrane protein [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291485152|dbj|BAI86227.1| glutamine ABC transporter, integral membrane protein [Bacillus
           subtilis subsp. natto BEST195]
          Length = 218

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 98/181 (54%), Gaps = 27/181 (14%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T + LPLL I  F  F LP    I +K +             I  + ++        AL
Sbjct: 60  ETIRNLPLLLIIFFTFFALPE---IGIKLE-------------ITAAAIT--------AL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + +A ++EI+RSGL ++ +GQ+EAA + GL++ +    +++PQA+R ++PP+ SQ+++
Sbjct: 96  TIFESAMLSEIIRSGLKSIDKGQIEAARSSGLSYTQTLFFIVMPQALRRMVPPIVSQFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390
           LLK++SLAV +   +L+     I  Q+        I L+   +Y +++  ++L   RL  
Sbjct: 156 LLKDTSLAVVIALPELIHNAQIINGQSADGSYFFPIFLLAALMYFAVNYSLSLAARRLEV 215

Query: 391 K 391
           +
Sbjct: 216 R 216



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T ++AF  +I +   G + G  R +   +++ +  V VE  RN+P L++IFF +
Sbjct: 18  GFLVTLYVAFISIILSFFFGLIAGTLRYAKVPVLSQLIAVLVETIRNLPLLLIIFFTF 75


>gi|241762840|ref|ZP_04760903.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241368015|gb|EER62220.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 217

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 112/227 (49%), Gaps = 34/227 (14%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG---------KALPLLYISTFLIF 230
           T+T+   A   V +  LG+VL+L   RLS HF   +          +  PL+    F+ F
Sbjct: 16  TVTLKLFAITLVLAVPLGLVLAL--ARLS-HFKPLSAAVNGYIWLMRGTPLMLQMLFIYF 72

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LP + +I ++                      P+F +  +A +   AA+ AEI R+G+ 
Sbjct: 73  ALPFVPVIGVRL---------------------PDFPAAVVAFALNYAAYFAEIFRAGIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RGQ EAA  LG+ + +  R ++LPQ +RSI+PP++++ + L+K++SL   +   DL+
Sbjct: 112 SVDRGQYEAAKVLGMNYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLL 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I+ +       I+   F YL +++++     RL  + A  ++
Sbjct: 172 RAARGIVQRDFTTTPFIVAAAF-YLIMTLVLTWGFQRLEKRYAKYDE 217


>gi|322372981|ref|ZP_08047517.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321278023|gb|EFX55092.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 155

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 75/130 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  +I  S  +AA++AEI+RS + AV +GQ EAA +LGL  +   R ++LPQAMR  
Sbjct: 24  PALLCAFIGFSSVSAAYMAEILRSSISAVDKGQWEAARSLGLPKKSIIRHIILPQAMRIA 83

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + PL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY +LS  + L
Sbjct: 84  VAPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREYDYMSMYILIAFIYWTLSFTLEL 143

Query: 384 FMNRLNAKIA 393
             N L  ++A
Sbjct: 144 LQNHLEKRLA 153


>gi|311898324|dbj|BAJ30732.1| putative amino acid ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 346

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 14/204 (6%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-- 239
           T++  A   +   V G++L++   RLSR+    +G A   LYI  ++  G P LV +   
Sbjct: 72  TLELTALAMLMGVVGGVLLAVM--RLSRN-PVLSGTAW--LYI--WIFRGTPVLVQLVFW 124

Query: 240 -----LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                L  Q+    P    F     +T+ P F +  + L    AA++AEIVR+G+ +V  
Sbjct: 125 NNIGVLWKQISLGVPFGPAFWSQESNTLVPVFTAALLGLGLNEAAYMAEIVRAGIQSVDE 184

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALG++   A R ++LPQAMR IIPP  ++ +++LK +SL   +   +L + G 
Sbjct: 185 GQAEAAHALGMSRATALRRIVLPQAMRVIIPPTGNETISMLKTTSLVQVIALVELFTAGH 244

Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378
            I  +T + I  ++     YL L+
Sbjct: 245 DIATRTYKPIPAMIAVSIYYLLLT 268


>gi|86605964|ref|YP_474727.1| polar amino acid ABC transporter permease [Synechococcus sp.
           JA-3-3Ab]
 gi|86554506|gb|ABC99464.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. JA-3-3Ab]
          Length = 401

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 28/215 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF----GLP-TLVLIALKYQLH 245
           +  F +G++L+L           +  +ALP++ I   L+     G+P T +L A    + 
Sbjct: 207 IIGFPIGVLLAL----------GRANRALPVIRIFCTLVIELVRGVPLTTILFAAWLLVP 256

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F         F+GG +V+   +   +A   +TA ++AE VR GL ++P GQ+EAA ALGL
Sbjct: 257 F---------FLGGISVN-LIIRAEVAFILFTAVYVAEDVRGGLQSIPLGQLEAARALGL 306

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQ 362
              + T LV+LPQA+R+ +P L +++L L K++SL   VG  DL+  G  +    N  G 
Sbjct: 307 NPFQVTALVILPQALRAAVPALVNEFLTLFKDTSLVFIVGLIDLLQAGRVVFTNPNWLGT 366

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             E++     IY      +A    ++   + L ++
Sbjct: 367 QREVLFFIGLIYFICCFAMAYAAQQVEKALGLGKR 401


>gi|33240124|ref|NP_875066.1| ABC-type amino acid transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33237651|gb|AAP99718.1| ABC-type amino acid transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 339

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 81/131 (61%), Gaps = 3/131 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA + + +A+IAE +R GL A+P  Q+EA  A+GL + + T+ ++LPQA+R  +P LT+Q
Sbjct: 208 IAFTLFVSAYIAEDIRGGLQAIPNTQIEAGKAIGLNNIQITQFIVLPQALRIALPALTNQ 267

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387
            + LL+N+SL   +G  +L+ +G +++      G+ IE+ +    IY  + +++AL    
Sbjct: 268 AIGLLQNTSLMAILGLVELLGIGRSLLANPEFIGRYIEVYVWLAAIYWLVCMIMALLARN 327

Query: 388 LNAKIALKEKK 398
           L  K+++  + 
Sbjct: 328 LEQKLSINRRN 338


>gi|295114882|emb|CBL35729.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [butyrate-producing
           bacterium SM4/1]
          Length = 214

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 84/127 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   +AA+++E++RSG+ AV +GQMEAA +LGL HR+A   V+LPQA+++I+P L ++
Sbjct: 88  VALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLGLNHRQAMVKVILPQAIKNIMPALGNE 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K++SLA      +L++V  T+      ++E ++I   IY  ++  ++  +N +  
Sbjct: 148 FVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSLETLIIVGCIYFIVTFSLSKGINFMER 207

Query: 391 KIALKEK 397
           ++   E+
Sbjct: 208 RMRANER 214


>gi|220904828|ref|YP_002480140.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869127|gb|ACL49462.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 249

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 72/123 (58%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +T A + E VRSG++A+ RGQ  A +ALGLT  +    VLLP A R I PPLTS+ 
Sbjct: 117 ALGLFTGARVCEQVRSGILALSRGQRYAGLALGLTLPQTYVHVLLPNAYRIITPPLTSEM 176

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LN++KN+++A  +G  +L S    ++  +G A E  +     Y+ L+ ++   M  L  K
Sbjct: 177 LNMVKNTAVASTIGLVELTSQANRLLEFSGFAYESFIAVTLAYVFLNFIVMRAMKMLEKK 236

Query: 392 IAL 394
           + L
Sbjct: 237 MRL 239



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 12/104 (11%)

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N + GI F  E+A F           + +Y   ++ GF+ T  L     I A I+G+ 
Sbjct: 2   QANWNWGIFF--EQAPF----------GNVTYLNWLIDGFLTTAALFVCAWIVAFIVGSF 49

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            G  R   +K +  +   YV +FRNIP +V  F  Y +   +LP
Sbjct: 50  FGILRTLPSKALRTVGATYVAIFRNIPLIVQFFIWYLAAPDLLP 93


>gi|168187335|ref|ZP_02621970.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           C str. Eklund]
 gi|169294769|gb|EDS76902.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           C str. Eklund]
          Length = 232

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 23/188 (12%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALPLL 222
           FLN  G++   L++ T     +FS +LG + +L           +S  F E   +  PLL
Sbjct: 15  FLNGAGITI-VLSLIT----VIFSSILGTIFALMKLSKIKILNIISNVFIEIV-RGTPLL 68

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                  +G+PTL        L      L Q + +G          + I L+  + A++A
Sbjct: 69  VQVYIFYYGIPTL--------LQNAGVELPQIDIMGNDFTG--LCMIVITLALNSTAYVA 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+RSG+ +V +GQMEAA +LGLTH  A R V++PQA+++I+P L ++++ ++K SS+  
Sbjct: 119 EIIRSGIESVNKGQMEAARSLGLTHGMAMRYVIIPQAIKNILPALGNEFITVIKESSIVS 178

Query: 343 AVGFADLV 350
            VG  +L+
Sbjct: 179 IVGIKELM 186


>gi|239636041|ref|ZP_04677055.1| L-cystine transport system permease protein TcyB [Staphylococcus
           warneri L37603]
 gi|239598312|gb|EEQ80795.1| L-cystine transport system permease protein TcyB [Staphylococcus
           warneri L37603]
          Length = 239

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 95/155 (61%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  K +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKVLKGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLLTNDADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +R+  + ++LPQA+R  IP L + +L L+K++SL
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181


>gi|229591450|ref|YP_002873569.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229363316|emb|CAY50435.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 233

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 15/201 (7%)

Query: 183 MDTNAKIFVFSFVLGIVL--SLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLI 238
           ++   ++ +F+++L +VL  +L   RL       TG  L    ++ ++ +   +PTLV +
Sbjct: 23  IEMTLQLALFAWLLAMVLALTLVTVRL-------TGNKLADRLVAGYVSYHRNVPTLVQL 75

Query: 239 ALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            L Y   F  P +L +   +  +  + E++   IAL    AA+  E +RSGL A+P GQ 
Sbjct: 76  MLWY---FGVPTLLSESAQLWLANHNTEYLFSVIALGLCQAAYFCEDIRSGLRAIPAGQT 132

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SLA+A+G  +L      + 
Sbjct: 133 EASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLAMAIGVVELTYASREVE 192

Query: 358 NQTGQAIEIILIWMFIYLSLS 378
           N T +  E  L+    YL  S
Sbjct: 193 NYTFRTFESYLVATVFYLVFS 213


>gi|258611866|ref|ZP_05711691.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria
           monocytogenes FSL R2-503]
 gi|258606739|gb|EEW19347.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria
           monocytogenes FSL R2-503]
          Length = 444

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 314 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 373

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 374 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 404


>gi|238854963|ref|ZP_04645293.1| glutamine ABC transporter, permease/substrate-binding protein
           [Lactobacillus jensenii 269-3]
 gi|260664248|ref|ZP_05865101.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii SJ-7A-US]
 gi|282931674|ref|ZP_06337167.1| probable amino-acid ABC transporter permease protein [Lactobacillus
           jensenii 208-1]
 gi|313472443|ref|ZP_07812935.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus jensenii 1153]
 gi|238832753|gb|EEQ25060.1| glutamine ABC transporter, permease/substrate-binding protein
           [Lactobacillus jensenii 269-3]
 gi|260562134|gb|EEX28103.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii SJ-7A-US]
 gi|281304285|gb|EFA96394.1| probable amino-acid ABC transporter permease protein [Lactobacillus
           jensenii 208-1]
 gi|313449147|gb|EEQ69141.2| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus jensenii 1153]
          Length = 220

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 31/220 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    V S+++G++L        ++     G      + LPLL I  F  FG P 
Sbjct: 22  VTVEVSIISIVLSYIIGLILGTIRYMKIKYISAVVGLIIDIIRNLPLLLIIFFTYFGFPE 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L                       G   +P F +   AL  + +A +AEIVR G+ AVP 
Sbjct: 82  L-----------------------GIHATP-FWAAISALVIFESAMLAEIVRGGIKAVPE 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A + G+T+ +A   V++PQAM  ++P L SQ+++L+K++SLA  +   +L+    
Sbjct: 118 GQMEGARSNGMTYLQAMCHVIMPQAMHMMMPALLSQFVSLVKDTSLATIIILPELLYHAQ 177

Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I +Q T   I + LI   +Y  +   ++LF  RL  K+ 
Sbjct: 178 IIYSQNTTYMIPMYLIIATMYFVVCFALSLFAQRLRKKLG 217


>gi|206563062|ref|YP_002233825.1| glutamine ABC transporter permease [Burkholderia cenocepacia J2315]
 gi|198039102|emb|CAR55065.1| glutamine ABC transporter, permease protein [Burkholderia
           cenocepacia J2315]
          Length = 218

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 97/189 (51%), Gaps = 17/189 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V  FV+G++  +F     R +  K    L  +YI   LI G P +V +     L+F  P
Sbjct: 30  LVGGFVVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L      G         +  IA++  + A++AE+VR  L+++P+G  EA +A+GL+  +
Sbjct: 80  LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI   
Sbjct: 133 VLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTA 192

Query: 370 WMFIYLSLS 378
              IYL L+
Sbjct: 193 VAVIYLLLT 201



 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 13/107 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++AF G++   ++G + G  R    K +  + +VY+E+ R  P +V + FLY +    
Sbjct: 22  TVFIAFFGLVGGFVVGMIAGMFRAYGPKAMNVLAQVYIELIRGTPIVVQVMFLYFA---- 77

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           LP+  H         +   GL+   + +  N+  ++   V G +LS+
Sbjct: 78  LPLLAH---------IRIDGLTAAIIAITVNSGAYLAEVVRGALLSI 115


>gi|86608410|ref|YP_477172.1| polar amino acid ABC transporter permease [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556952|gb|ABD01909.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 402

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 28/215 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF----GLP-TLVLIALKYQLH 245
           +  F +G++L+L           +  +ALP++ I   L+     G+P T +L A    + 
Sbjct: 208 IIGFPIGVLLAL----------GRANRALPVIRIFCTLVIELVRGVPLTTILFAAWLLVP 257

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F         F+GG +V+   +   +A   +TA ++AE VR GL ++P GQ+EAA ALGL
Sbjct: 258 F---------FLGGISVN-LIIRAEVAFILFTAVYVAEDVRGGLQSIPLGQLEAARALGL 307

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQ 362
              + T LV+LPQA+R+ +P L +++L L K++SL   VG  DL+  G  +    N  G 
Sbjct: 308 NPFQVTALVILPQALRAAVPALVNEFLTLFKDTSLVFIVGLIDLLQAGRVVFTNPNWLGT 367

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             E++     IY      +A    ++   + L ++
Sbjct: 368 QREVLFFIGLIYFICCFAMAYAAQQVEKALGLGKR 402


>gi|312963938|ref|ZP_07778409.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311281973|gb|EFQ60583.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 256

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++ VP GQ EAA+ALG+        V LPQAMR+IIPP T+Q
Sbjct: 127 IALSLNYGAYLSEIFRAGILGVPHGQREAALALGMRDSAIFWHVTLPQAMRTIIPPATNQ 186

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     IY  +S+ + L   R+ 
Sbjct: 187 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAIIYWVMSLGLELIQARME 245


>gi|288922651|ref|ZP_06416827.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EUN1f]
 gi|288346009|gb|EFC80362.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EUN1f]
          Length = 213

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 69/113 (61%), Gaps = 1/113 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ Y  AF+ E VR+G+  V  GQ EAA ALGLT  ++ RLV+LPQA R+++ PL S 
Sbjct: 86  MALTIYHTAFVCEAVRAGVNGVEVGQAEAARALGLTFSQSLRLVILPQAFRNVVQPLGSV 145

Query: 331 YLNLLKNSSLAVAVGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIA 382
              L++NSS+A A G  +L  V  G      G  I I+L  +  YL L++ +A
Sbjct: 146 GSALIRNSSIAAAFGVQELTGVSQGLATANPGDVIAILLAGIVCYLVLTLSLA 198


>gi|121607782|ref|YP_995589.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552422|gb|ABM56571.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 221

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 14/209 (6%)

Query: 189 IFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +F  S VL G+ L L A  +  H   +  +   + YI  F      T +L+ L + +++ 
Sbjct: 26  LFTLSTVLAGVALGLVAGVIRTH-RSRWLRLPAIAYIEAFRC----TPLLVQLVW-IYYA 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PVL       G  +SP  M+ ++ L+ Y  AF AE+ R G+ AV +GQ EA  ALG+ H
Sbjct: 80  LPVLS------GVALSP-IMACFLTLTLYAGAFYAEVFRGGIEAVGKGQWEAGGALGMRH 132

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQA+R +IP   +Q +  LKN+SL   +  ADL+  G  I     + +E+ 
Sbjct: 133 AQTLRSIILPQAVRIMIPSFINQTVMQLKNTSLVSTIAVADLLYQGAVITAAIYRPLEVY 192

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   IY ++   + +   R+  ++  + 
Sbjct: 193 TVVAVIYFAVLFPLTVAAQRVETRLGTRR 221


>gi|256396803|ref|YP_003118367.1| polar amino acid ABC transporter inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
 gi|256363029|gb|ACU76526.1| polar amino acid ABC transporter, inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
          Length = 333

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 82/141 (58%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           ++ F  P   +F  +  ++    F +  +AL    AA+++EIVR+G+++V  GQ EAA +
Sbjct: 146 EVGFGIPFGPEFFHLDTNSTITRFTAAVLALGLNEAAYMSEIVRAGILSVDEGQSEAAAS 205

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+   K  R ++LPQAMR IIPP  ++ +++LK SSLA  +G  +L     + I+   +
Sbjct: 206 LGMRRAKIMRRIVLPQAMRVIIPPTGNETISMLKTSSLASVIGVVELTDASESAIHLYFK 265

Query: 363 AIEIILIWMFIYLSLSIMIAL 383
           AI   ++    YL  + ++++
Sbjct: 266 AIPFYVVASLWYLFFTTVLSI 286


>gi|51245288|ref|YP_065172.1| amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50876325|emb|CAG36165.1| probable amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 473

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 63/95 (66%), Gaps = 6/95 (6%)

Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           PE MS        I ++ + AA+IAE++R GL A+P+GQ EAA ALG T+ K   +++LP
Sbjct: 331 PENMSFDKLLRALIGVAFFYAAYIAEVIRGGLQAIPKGQYEAAEALGWTYWKKMSVIILP 390

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           Q +R +IP L + +L+LLK+++L   +G  DL+ V
Sbjct: 391 QTLRMVIPGLANNFLSLLKDTTLVAVIGLLDLLGV 425


>gi|148543958|ref|YP_001271328.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|227364871|ref|ZP_03848917.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325682504|ref|ZP_08162021.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530992|gb|ABQ82991.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus reuteri DSM 20016]
 gi|227070075|gb|EEI08452.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324978343|gb|EGC15293.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 503

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 22/194 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG + +L     ++  H     ++ + YI    + G P +V I   Y        
Sbjct: 316 IFGFLLGTLFALMRLSKNKFLH-----SIAVCYIE--FLRGTPMMVQIMFVY-------- 360

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G+ +   P  ++  IA+S  + A++AEI+RSG+ ++P GQ EAA +LG++  
Sbjct: 361 -----FGIGALIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKN 415

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++PQA+++I P L ++ + LLK+SSL   +G ++L+     + + T + +  + 
Sbjct: 416 ETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLF 475

Query: 369 IWMFIYLSLSIMIA 382
           I M IY  L+  ++
Sbjct: 476 ITMIIYFILTFTLS 489


>gi|288574423|ref|ZP_06392780.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570164|gb|EFC91721.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 217

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 11/152 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++I G P LV + L Y   F  P LG  N        P F++  I L   ++ ++ EIVR
Sbjct: 60  YVIRGTPLLVQLFLIY---FGLPSLG-INL-------PAFVAGIIGLGINSSGYVGEIVR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AVP+GQ EA+  LGL++ K+ R ++LPQA+RS++P + ++++ L+K SSL   +  
Sbjct: 109 GGIEAVPKGQWEASKMLGLSYLKSMRYIILPQAIRSMLPAIGNEFVTLIKESSLLSTLAI 168

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            +L   G  + + T  + E  +    IYL L+
Sbjct: 169 TELTMAGQQVRSVTYASFETFIAVGIIYLCLT 200


>gi|251795092|ref|YP_003009823.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247542718|gb|ACS99736.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 223

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 73/112 (65%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + Y+ L+  + A+IAEI+R+G+ AV +GQMEAA +LG++   A R ++LPQA ++++P
Sbjct: 93  FTAAYLTLTVNSGAYIAEIMRAGIQAVDKGQMEAARSLGMSKGLAMRQIILPQAFKNVLP 152

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            L ++++ ++K SS+   VG+A+L      I   T  +IE +L+   IY  L
Sbjct: 153 ALGNEFVVVVKESSVLSVVGYAELTYQANAIRGATFISIEPMLVSALIYFVL 204


>gi|194467780|ref|ZP_03073766.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194452633|gb|EDX41531.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 503

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 22/194 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG + +L     ++  H     ++ + YI    + G P +V I   Y        
Sbjct: 316 IFGFLLGTLFALMRLSKNKFLH-----SIAVCYIE--FLRGTPMMVQIMFVY-------- 360

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G+ +   P  ++  IA+S  + A++AEI+RSG+ ++P GQ EAA +LG++  
Sbjct: 361 -----FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKN 415

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++PQA+++I P L ++ + LLK+SSL   +G ++L+     + + T + +  + 
Sbjct: 416 ETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLF 475

Query: 369 IWMFIYLSLSIMIA 382
           I M IY  L+  ++
Sbjct: 476 ITMIIYFILTFTLS 489


>gi|84685380|ref|ZP_01013278.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666537|gb|EAQ13009.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Rhodobacterales bacterium HTCC2654]
          Length = 433

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 60/86 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + +A+IAE++R GL A+PRGQ EAA ALGL + KA RL++LPQA++  IP + S 
Sbjct: 304 IMATLFASAYIAEVIRGGLAALPRGQYEAADALGLDYWKAQRLIILPQALKISIPGIVST 363

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI 356
           ++ L K+++L   +G  D + + G+I
Sbjct: 364 FIGLFKDTTLVSIIGLLDPIGLTGSI 389


>gi|115361199|ref|YP_778336.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115286527|gb|ABI92002.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 297

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 10/225 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           G FL  R +    LT   N  +  V +  LG+VL +  T + R        A+   YI  
Sbjct: 66  GQFLTARSI----LTGLGNTIVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAHGYI-- 118

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEI 284
           +L  G P ++ + L + L    P LG        TV     F++  + L     A+ +E+
Sbjct: 119 WLFRGTPVILQLLLWFNLGLVFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEV 178

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+GL++V  GQ EAA ++G+   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V
Sbjct: 179 VRAGLLSVDTGQYEAAKSIGMARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVV 238

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +A+++     I     + IE++++    YL++  +++L   R+ 
Sbjct: 239 QYAEMLHNAQNIYYANARVIELLIVAGIWYLAIVTVLSLAQARVE 283


>gi|209546624|ref|YP_002278542.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537868|gb|ACI57802.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 251

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 89/157 (56%), Gaps = 11/157 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P+L       G+ V P F+++   L  Y +AF++E+VR+G++
Sbjct: 74  GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+AA ALG  H  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL 
Sbjct: 124 ALGPGQMDAARALGHGHIGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMN 386
                + NQ   Q  ++ LI   +Y ++   +  F N
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220


>gi|184153353|ref|YP_001841694.1| amino acid ABC transporter substrate binding and permease
           components [Lactobacillus reuteri JCM 1112]
 gi|183224697|dbj|BAG25214.1| amino acid ABC transporter substrate binding and permease
           components [Lactobacillus reuteri JCM 1112]
          Length = 443

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 22/194 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG + +L     ++  H     ++ + YI    + G P +V I   Y        
Sbjct: 256 IFGFLLGTLFALMRLSKNKFLH-----SIAVCYIE--FLRGTPMMVQIMFVY-------- 300

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G+ +   P  ++  IA+S  + A++AEI+RSG+ ++P GQ EAA +LG++  
Sbjct: 301 -----FGIGALIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKN 355

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++PQA+++I P L ++ + LLK+SSL   +G ++L+     + + T + +  + 
Sbjct: 356 ETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLF 415

Query: 369 IWMFIYLSLSIMIA 382
           I M IY  L+  ++
Sbjct: 416 ITMIIYFILTFTLS 429


>gi|116628764|ref|YP_813936.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri ATCC 33323]
 gi|116094346|gb|ABJ59498.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus gasseri ATCC 33323]
          Length = 537

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 75/120 (62%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+ A P+GQ EAA A+G+TH +    ++LPQA+R+ +P +T++++
Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFI 450

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG T+ +QT Q  +   I   IYL L+  I    N +  K+
Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFNFIEKKL 510



 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134
           Y + IL G   T  LA  G I    IG LVG           G+    K+V WI  VY+E
Sbjct: 296 YGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYIE 355

Query: 135 VFRNIPPLVVIFFLY 149
           VFR  P +V    +Y
Sbjct: 356 VFRGTPMMVQAAVIY 370


>gi|54309365|ref|YP_130385.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium profundum SS9]
 gi|46913801|emb|CAG20583.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium profundum SS9]
          Length = 365

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 61/83 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE+VR GL A+PRGQ EAA ALGL++ K+  L++LPQA++  IP + + 
Sbjct: 235 IGVVLFSAAYMAEVVRGGLQAIPRGQYEAADALGLSYWKSMYLIVLPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317


>gi|317055330|ref|YP_004103797.1| polar amino acid ABC transporter inner membrane subunit
           [Ruminococcus albus 7]
 gi|315447599|gb|ADU21163.1| polar amino acid ABC transporter, inner membrane subunit
           [Ruminococcus albus 7]
          Length = 229

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 103/195 (52%), Gaps = 19/195 (9%)

Query: 209 RHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           R  + KTGK     AL  LY++  +I G P +V + + Y           F       VS
Sbjct: 49  RCTYLKTGKMKIADALCRLYLT--VIRGTPMMVQLLIIY-----------FVVFASVNVS 95

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              +++ IA    + A++AEIVR G++++  GQMEA  +LGL +R+    +++PQA++++
Sbjct: 96  KTLVAI-IAFGINSGAYVAEIVRGGIMSIDNGQMEAGRSLGLNYRQTMTSIIMPQALKTV 154

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++ + LLK +S+A  +G  DL   G  I  QT      ++    IYL + + +  
Sbjct: 155 LPALANECIVLLKETSVAGYIGIYDLTKGGDEIRAQTYSPFLPLIAVAVIYLVMVMFLTF 214

Query: 384 FMNRLNAKIALKEKK 398
            + +L  +++  +++
Sbjct: 215 LVGKLERRLSANDRR 229


>gi|227818418|ref|YP_002822389.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337417|gb|ACP21636.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 235

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 68/111 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA+ +E +RSG+ AV  GQMEAA ALG ++  A R V++PQ  R+ +P L + 
Sbjct: 106 IGLGLCQAAYFSEDLRSGMRAVSPGQMEAARALGHSYVSAMRFVMVPQGSRNALPALINH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L KNSSLAVA+G A+L      I N + +  E  L+   +YL  S+MI
Sbjct: 166 SVSLFKNSSLAVAIGVAELTYAVKEIENLSFRTFESYLLVTVLYLVFSLMI 216


>gi|119510483|ref|ZP_01629616.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Nodularia spumigena
           CCY9414]
 gi|119464905|gb|EAW45809.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Nodularia spumigena
           CCY9414]
          Length = 383

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 3/128 (2%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  ++AA++AE +R GL A+PRGQ+EAA ALGL       L++LPQA+R++IP +  Q+
Sbjct: 256 GLVLFSAAYMAENLRGGLQAIPRGQVEAAKALGLNTPLVVILIILPQALRAVIPAIVGQF 315

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + L K++SL   VG  +L  +  +I+ Q    G+  E+ L    IY     +++L   RL
Sbjct: 316 IGLFKDTSLLSLVGLVELTGISRSILAQPQFLGRYAEVYLFIGLIYWIFCYLMSLASRRL 375

Query: 389 NAKIALKE 396
             ++ + +
Sbjct: 376 ERQLNISQ 383


>gi|126461169|ref|YP_001042283.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|221638147|ref|YP_002524409.1| Polar amino acid ABC transporter inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|126102833|gb|ABN75511.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|221158928|gb|ACL99907.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 442

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 57/78 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + KA RL++LPQA++  IP + S 
Sbjct: 312 IMVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWKAQRLIILPQALKISIPGIVST 371

Query: 331 YLNLLKNSSLAVAVGFAD 348
           ++ + K+++L V VG  D
Sbjct: 372 FIGMFKDTTLVVFVGLLD 389


>gi|229015747|ref|ZP_04172728.1| Amino acid ABC transproter, permease [Bacillus cereus AH1273]
 gi|229021947|ref|ZP_04178508.1| Amino acid ABC transproter, permease [Bacillus cereus AH1272]
 gi|228739362|gb|EEL89797.1| Amino acid ABC transproter, permease [Bacillus cereus AH1272]
 gi|228745552|gb|EEL95573.1| Amino acid ABC transproter, permease [Bacillus cereus AH1273]
          Length = 230

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 75/126 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL+L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|238852979|ref|ZP_04643378.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|282852417|ref|ZP_06261759.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311111395|ref|ZP_07712792.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus gasseri MV-22]
 gi|238834429|gb|EEQ26667.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|282556159|gb|EFB61779.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311066549|gb|EFQ46889.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus gasseri MV-22]
          Length = 537

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 75/120 (62%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+ A P+GQ EAA A+G+TH +    ++LPQA+R+ +P +T++++
Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFI 450

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG T+ +QT Q  +   I   IYL L+  I    N +  K+
Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFNFIEKKL 510



 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134
           Y + IL G   T  LA  G I    IG LVG           G+    K+V WI  VY+E
Sbjct: 296 YGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYIE 355

Query: 135 VFRNIPPLVVIFFLY 149
           VFR  P +V    +Y
Sbjct: 356 VFRGTPMMVQAAVIY 370


>gi|153010088|ref|YP_001371302.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561976|gb|ABS15473.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 548

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 22/215 (10%)

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            V +  FR  PP  +     K+ +S + +P  S+     +      L+      D +   
Sbjct: 294 EVPLRTFRG-PPEALAALGKKADVSAVLLPAASVPANVPVLWQTEALN------DRDKSA 346

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHF 246
            +   VL I L L       H H +     PL   S F+   I G+P LV++     L+ 
Sbjct: 347 GIAFVVLAIALGLLTA--CGHIHRRH----PLSIGSEFIVDTIRGIPMLVIV-----LYV 395

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P+ G         + P  M+  +A ++   +A++AEI RSG+ A+PRGQ+EAA +LGL
Sbjct: 396 GLPLSGALKDATQGVIDPPNMARGVAAMALAYSAYLAEIFRSGINAIPRGQIEAARSLGL 455

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
              +  RLV+LPQA R IIPPL ++ + +LK++SL
Sbjct: 456 NGWQTARLVILPQAFRIIIPPLGNELIAILKDTSL 490


>gi|118467773|ref|YP_890806.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine [Mycobacterium smegmatis str. MC2
           155]
 gi|118169060|gb|ABK69956.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Mycobacterium smegmatis str. MC2
           155]
          Length = 297

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 10/162 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG-------STVSPEFMSLYIALSCYTAA 279
           +L  GLP L+ I + Y L    PV+     +GG       + +   F +  + L+   +A
Sbjct: 99  WLFRGLPVLLQILIWYNLALVIPVISIPLPMGGYLLQEPTNALVSAFTAALLGLALNESA 158

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AEIVR+GL +V  GQ+EAA ++G+T  +  R ++LPQAMR IIPP  + ++++LK +S
Sbjct: 159 YMAEIVRAGLNSVDSGQVEAAKSIGMTPAQTLRRIVLPQAMRVIIPPTGNDFIDMLKGTS 218

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +A  +G  +L+     I +     +E +    IW  + ++L+
Sbjct: 219 IASVIGVTELLHAANNISSNNLLVMETLFAAAIWYMVVVTLA 260



 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 12/108 (11%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++VG VNT  LA      A +IG  +   R SAN +  W    Y+ +FR +P L+ I   
Sbjct: 54  MVVGLVNTVLLALVAQAAAIVIGVGIALLRRSANPVARWFAAAYIWLFRGLPVLLQILIW 113

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           Y   L    IP  SI LP G +L         L   TNA +  F+  L
Sbjct: 114 YNLALV---IPVISIPLPMGGYL---------LQEPTNALVSAFTAAL 149


>gi|77462293|ref|YP_351797.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Rhodobacter sphaeroides 2.4.1]
 gi|77386711|gb|ABA77896.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Rhodobacter sphaeroides 2.4.1]
          Length = 442

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 57/78 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + KA RL++LPQA++  IP + S 
Sbjct: 312 IMVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWKAQRLIILPQALKISIPGIVST 371

Query: 331 YLNLLKNSSLAVAVGFAD 348
           ++ + K+++L V VG  D
Sbjct: 372 FIGMFKDTTLVVFVGLLD 389


>gi|330861765|emb|CBX71939.1| hypothetical protein YEW_AJ02060 [Yersinia enterocolitica W22703]
          Length = 119

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 55/71 (77%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAE +RSG+  V +GQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KNS
Sbjct: 1   AFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKNS 60

Query: 339 SLAVAVGFADL 349
           SLA+A+G A+L
Sbjct: 61  SLAMAIGVAEL 71


>gi|300362597|ref|ZP_07058773.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300353588|gb|EFJ69460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 537

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 75/120 (62%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+ A P+GQ EAA A+G+TH +    ++LPQA+R+ +P +T++++
Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPSITNEFI 450

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG T+ +QT Q  +   I   IYL L+  I    N +  K+
Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFNFIEKKL 510



 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134
           Y + IL G   T  LA  G I    IG LVG           G+    K+V WI  VY+E
Sbjct: 296 YGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYIE 355

Query: 135 VFRNIPPLVVIFFLY 149
           VFR  P +V    +Y
Sbjct: 356 VFRGTPMMVQAAVIY 370


>gi|134103707|ref|YP_001109368.1| putative ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291004758|ref|ZP_06562731.1| putative ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133916330|emb|CAM06443.1| putative ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 264

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 30/210 (14%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTL-VLIALKYQLH 245
           F F   LGIVL+L           K     P  +I+T    L  GLP L V IAL     
Sbjct: 67  FGFGLALGIVLALM----------KLSPVGPYRWIATAYIELFRGLPALLVFIAL----G 112

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+  Q  F   STV        +AL    AA++AE +R+G+ AVPRGQ+EAA +LG+
Sbjct: 113 FGVPIAFQMRFDIYSTV-------MLALGLVGAAYMAETIRAGVQAVPRGQVEAARSLGM 165

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361
           +  +    V++PQA R I+PPLT++ + L K+SSL   +G A    +L   G   +N+  
Sbjct: 166 SPTRTMLTVVMPQAFRIILPPLTNELILLTKDSSLVYLLGLASNEYELAKFGRNALNEYA 225

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++  +L+    YL ++I ++   N L  K
Sbjct: 226 -SLTPLLVAGLCYLIITIPLSRVSNVLERK 254


>gi|70733437|ref|YP_263212.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68347736|gb|AAY95342.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 286

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 75/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++ VP GQ +AA+ALG++       V LPQAMR+IIPP T+Q
Sbjct: 157 IALSLNYGAYLSEIFRAGILGVPHGQRQAALALGMSDSVIFWQVTLPQAMRTIIPPATNQ 216

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     IY  LSI + L   R+ 
Sbjct: 217 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLSTAALIYWLLSIGLELIQARME 275


>gi|70733738|ref|YP_257378.1| glutamine/glutamate ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68348037|gb|AAY95643.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 219

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 10/135 (7%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV +   Y L F  P+     F G S   P F    + LS + A+ + E+VR  L +
Sbjct: 66  IPVLVWL---YLLFFGFPI-----FFGLSI--PSFTCAVLVLSLWGASEVGEVVRGALQS 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EA +++GL+  +    VLLPQA++ + PP  + Y  ++K SSLAV +G  D++ 
Sbjct: 116 LPRGQREAGLSIGLSGAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIK 175

Query: 352 VGGTIINQTGQAIEI 366
           VG  II +T +++ I
Sbjct: 176 VGQQIIERTYESVLI 190


>gi|282863109|ref|ZP_06272169.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282562091|gb|EFB67633.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 266

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 27/210 (12%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLI 238
           T+   A  F+F  VLG+V++L        +    G     +YI  F   GLP L   + +
Sbjct: 63  TVVYTASGFLFGLVLGLVVALMRLSSVAPYRWAAG-----VYIEIFR--GLPALLIFIFV 115

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +   L F          I G T    +  + + L    AA++AE  R+G+ AVP+GQME
Sbjct: 116 GVAVPLAFPG------TEIPGGT----YGKVALGLGLVAAAYMAETFRAGIQAVPKGQME 165

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGG 354
           AA +LG +H +A   V++PQA+R ++PPLT++ + L K+SSL + +G      +L   G 
Sbjct: 166 AARSLGFSHARAMVSVVIPQALRVVVPPLTNELVLLFKDSSLVLFLGVTLQERELTKFGR 225

Query: 355 TIINQTGQAIEII---LIWMFIYLSLSIMI 381
            + +QT  +  I+   L ++ + + LS ++
Sbjct: 226 DLASQTANSTPILVAGLCYLLVTIPLSFVV 255



 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I    VNT     SG +   ++G +V   RLS+     W   VY+E+FR +P L++  F+
Sbjct: 56  ITTALVNTVVYTASGFLFGLVLGLVVALMRLSSVAPYRWAAGVYIEIFRGLPALLIFIFV 115

Query: 149 YKSVLSVLP 157
             +V    P
Sbjct: 116 GVAVPLAFP 124


>gi|238927936|ref|ZP_04659696.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas flueggei ATCC 43531]
 gi|238884269|gb|EEQ47907.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas flueggei ATCC 43531]
          Length = 214

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 109/205 (53%), Gaps = 19/205 (9%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +IF  +  L + L LFA   RLS HF   +     +L I  +++ G P ++ +   Y   
Sbjct: 20  EIFCVTLALALPLGLFAALGRLS-HFRPLSR----MLEIYIWIMRGTPLMLQLLFVY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P++G         + P+  +  +A     AA+ AEI R+G+ AVPRGQ EAA  LG+
Sbjct: 72  FALPMVG--------ILLPDIAAALLAFILNYAAYFAEIFRAGIQAVPRGQFEAARVLGM 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R ++LPQ +R  +PP++++ +NL+K++SL   +   DL+ V  TI+ +      
Sbjct: 124 SAPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTP 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390
            ++  +F YL+++ ++     +L A
Sbjct: 184 FLIAGIF-YLTMTAVLTYGFKKLEA 207


>gi|226360126|ref|YP_002777904.1| amino acid ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226238611|dbj|BAH48959.1| putative amino acid ABC transporter permease protein [Rhodococcus
           opacus B4]
          Length = 327

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 87/158 (55%), Gaps = 4/158 (2%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           QL    P + QF  I    ++  F+   I L    AA++AEIVR+G+ +V  GQ EA++A
Sbjct: 135 QLDLGIPFVHQFVHIDLQGINAAFLFAVIGLGLNEAAYMAEIVRAGVNSVAEGQSEASVA 194

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTG 361
           LG+T  +  R  +LPQAMR IIPP  ++ +++LK +SL  AV ++ +L      I     
Sbjct: 195 LGMTWSQTMRRTVLPQAMRVIIPPTGNELISMLKTTSLVTAVPYSLELYGRARDISGANF 254

Query: 362 QAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALKE 396
           Q I ++++   W     SL ++   ++ R  +K A ++
Sbjct: 255 QPIPLLMVAATWYLAITSLLMIGQFYLERYYSKGASRK 292


>gi|47094446|ref|ZP_00232127.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 4b H7858]
 gi|47017175|gb|EAL08027.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 4b H7858]
          Length = 395

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 265 FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 324

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 325 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 355


>gi|298249929|ref|ZP_06973733.1| polar amino acid ABC transporter, inner membrane subunit
           [Ktedonobacter racemifer DSM 44963]
 gi|297547933|gb|EFH81800.1| polar amino acid ABC transporter, inner membrane subunit
           [Ktedonobacter racemifer DSM 44963]
          Length = 251

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 76/134 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F  + +A S    A+++EI+R+ + AV  GQMEA+ ALG+ +  A R ++LPQA R +
Sbjct: 92  PDFACILVAFSLNEGAYMSEIIRAAIGAVDPGQMEASKALGMRYWVAMRRIILPQAARVV 151

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL +++ N+LK +S+A  +G  +L     T    T    E++++    YL L+ +  +
Sbjct: 152 IPPLGNEFNNMLKTTSIATVIGMLELTGTARTFGAPTFNIFELLIVATVYYLILTTIWDV 211

Query: 384 FMNRLNAKIALKEK 397
               +  ++    K
Sbjct: 212 IQRWIERRLDPDRK 225


>gi|218887009|ref|YP_002436330.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|147842971|dbj|BAF62530.1| glutamine ABC transporter, permease protein [Desulfovibrio
           vulgaris]
 gi|218757963|gb|ACL08862.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 223

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 16/192 (8%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           AT L++    K  +AL  +Y+    I G P +V +     L+F  P+             
Sbjct: 41  ATGLAKTARGKLPRALADIYVEA--IRGTPLIVQVMF---LYFGVPLATGMRI------- 88

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IA++  + A+IAEIVR  + ++  GQ EA  ++GLT  +    V+ PQA R +
Sbjct: 89  PPVTAGIIAIAVNSGAYIAEIVRGAVESIDVGQTEAGRSIGLTRMQTLLYVVWPQAFRRM 148

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA- 382
           IPPL +Q++  LK++SL V +G  +L   G  II    +A E+ L    +YL +++ IA 
Sbjct: 149 IPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAVMYLVMTLSIAR 208

Query: 383 ---LFMNRLNAK 391
              ++  +LNA+
Sbjct: 209 ALRVYERKLNAR 220


>gi|325277060|ref|ZP_08142718.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324097810|gb|EGB95998.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 273

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 75/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++ V RGQ EAA+ALG+   +    ++LPQAMR IIPP  +Q
Sbjct: 146 IALSLNYGAYLSEIFRAGILGVARGQREAALALGMRPPQTFCYIVLPQAMRVIIPPTANQ 205

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + +E++     IY  LSI++ L   RL 
Sbjct: 206 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAIIYWVLSILLELLQARLE 264


>gi|295398454|ref|ZP_06808493.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
 gi|294973318|gb|EFG49106.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
          Length = 514

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 23/206 (11%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LGI L+L      R  +    K L   YI    + G P ++ +   +        L
Sbjct: 328 FGMILGIFLALM-----RLTNNPVLKFLATAYIE--FVRGTPLMIQVLFMF--------L 372

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G  +  G ST++   +S+    S  + A+IAEI+R G+ +V +GQ EAA +LGL + +  
Sbjct: 373 GVGSIFGWSTMTAGLVSV----SMNSGAYIAEIIRGGIQSVDKGQAEAARSLGLGYWQTM 428

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+ PQ++RSI P L ++++ L+K SS+   +G A+L      + + T QA+  + I M
Sbjct: 429 RKVIFPQSLRSIWPSLGNEFITLIKESSIVSTIGVAELTFQTRAVTSITYQAVVPLFISM 488

Query: 372 FIYL----SLSIMIALFMNRLNAKIA 393
            IY     +LS ++ ++  ++N K A
Sbjct: 489 IIYFIMTYALSQVLNVYERKMNQKYA 514


>gi|224368642|ref|YP_002602804.1| ABC-type amino acid transporter, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223691358|gb|ACN14641.1| ABC-type amino acid transporter, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 217

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +A++   +AFI EIV  G+ ++ +GQ EAA + GL+  +  RLV+LPQAMR I+P
Sbjct: 89  FSAALLAMAIMGSAFICEIVAGGIASISKGQWEAAESSGLSRIQQMRLVILPQAMRVILP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  Q++ L+K++S+   +G  DL  VG   + +  + + +  +   +Y  +S  + L  
Sbjct: 149 PLVGQFVLLIKDTSVVSVIGVMDLTRVGWITVIRIPEGLMVFSLVGILYFVISYPLILLS 208

Query: 386 NRLNAKIAL 394
           N L  K+A+
Sbjct: 209 NYLERKMAV 217


>gi|218515611|ref|ZP_03512451.1| putative permease component of ABC transporter [Rhizobium etli
           8C-3]
          Length = 235

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 69/111 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA+ +E +RSG+ +V  GQMEAA ALG  +  A R V++PQ +R+ +PPL + 
Sbjct: 106 IGLGLCQAAYFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L KNSSLAV +G ++L      I N + +  EI LI   +YL  S++I
Sbjct: 166 SVSLFKNSSLAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLVFSLVI 216


>gi|224477394|ref|YP_002635000.1| hypothetical protein Sca_1909 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422001|emb|CAL28815.1| hypothetical protein SCA_1909 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 235

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 93/154 (60%), Gaps = 8/154 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 30  ITLVTFVLGLIIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQL---FIIFYGL 83

Query: 249 PVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           P LG+   N        P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ 
Sbjct: 84  PELGRLVTNNPDTQWTLPSVVAAIIGLSLNVGAYASEIIRGGIISIPKGQSEAAYSIGMN 143

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +R+  + ++LPQA+R  +P L + +L+LLK++SL
Sbjct: 144 YRQTIQRIILPQAIRVSVPALGNTFLSLLKDTSL 177


>gi|313632218|gb|EFR99284.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri
           FSL N1-067]
 gi|313636716|gb|EFS02380.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri
           FSL S4-171]
          Length = 226

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 96  FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 156 ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 186


>gi|187479526|ref|YP_787551.1| L-amino acid ABC transporter permease [Bordetella avium 197N]
 gi|115424113|emb|CAJ50666.1| L-amino acid ABC transporter, permease protein [Bordetella avium
           197N]
          Length = 366

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 19/230 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N+R    P LT+  +     F+F +G++L+L      R  +    KAL ++YI   LI G
Sbjct: 153 NSRWGGLP-LTLILSTFGIAFAFPIGVLLAL-----GRRSNMPAIKALCVVYIE--LIRG 204

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P + L+       F   V+       G ++  + +   IA+  + AA+IAE VR GL A
Sbjct: 205 VPLISLL-------FMSSVMLPLFLPEGFSID-KLLRAQIAIILFAAAYIAETVRGGLQA 256

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV- 350
           + +GQ E A +LGL++ +  R ++LPQA++ +IPPL S ++ L K++SL V +G  DL  
Sbjct: 257 ISKGQYEGADSLGLSYWQKMRKIILPQALKVVIPPLVSIFIALFKDTSLVVIIGIFDLTL 316

Query: 351 --SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 +     G  IE  L    IY      ++ +   L  ++A   ++
Sbjct: 317 AAKAALSDAAWRGFGIEAYLFISLIYFVFCFSMSKYSQHLERRLATGHQR 366


>gi|257092717|ref|YP_003166358.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045241|gb|ACV34429.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 226

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 82/140 (58%), Gaps = 6/140 (4%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F  GS +     S     + + AA+ +EI+R+G+ +VP+GQM AA ALG+T+ +A RL
Sbjct: 87  FGFPRGSDM--RLSSAIAGFALFEAAYYSEIIRAGIQSVPKGQMAAASALGMTYGQAMRL 144

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----I 369
           V+LPQA R+++P L +Q + L +++SL      AD       + ++ G+ +E++L    +
Sbjct: 145 VVLPQAFRNMVPLLLTQGIILFQDTSLVYVSALADFFGAAYKVGDRDGRLVELLLFAGAV 204

Query: 370 WMFIYLSLSIMIALFMNRLN 389
           +  I  + S ++  + N+L 
Sbjct: 205 YFVICFTASRIVRYYQNKLK 224


>gi|190894778|ref|YP_001985071.1| glutamine ABC transporter ATP-binding protein [Rhizobium etli CIAT
           652]
 gi|190700439|gb|ACE94521.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CIAT
           652]
          Length = 505

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   V+G+VL++     SR         LP   + T +  GLP +V I           +
Sbjct: 41  VLGVVIGMVLAVMGISQSRWLR------LPA-RVYTDIFRGLPAIVTIL----------I 83

Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L I ALS    A+I EI RSG+ +V RGQMEA  AL +++ 
Sbjct: 84  IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364
           +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      TG   
Sbjct: 144 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++L  +F YL +++ +  F+N ++A++ L ++
Sbjct: 204 PLLLAGVF-YLVITVPLTHFVNYIDARLRLGKQ 235


>gi|310767115|gb|ADP12065.1| glutamine ABC transporter, permease protein [Erwinia sp. Ejp617]
          Length = 219

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 113/206 (54%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V   V G+++ L A   +R +     + + L++I   LI G P +V +   Y   F  
Sbjct: 25  ISVLGLVGGVIIGLIAG-FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   F  +    + P F +  + +   + A+IAEI R  ++++ RG  EA +ALGL+ R
Sbjct: 79  PM--AFTDL---RIDP-FSAAVVTIIINSGAYIAEITRGAVLSINRGFREAGLALGLSGR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               IYL ++++++  + RL  ++ +
Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218


>gi|269964207|ref|ZP_06178498.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269831056|gb|EEZ85224.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 365

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 220 FLAQGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|315640806|ref|ZP_07895906.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483418|gb|EFU73914.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 218

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 28/175 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL I  F  F LP    I +K+ +                     F S  IAL+ +
Sbjct: 63  RNLPLLLIIFFTYFALPQ---IGIKFDI---------------------FWSAVIALTIF 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A ++EI R+GL AVP+GQMEA ++ GLT+ +    +++PQA RS++P + SQ ++L+K
Sbjct: 99  ESAMLSEIFRAGLNAVPKGQMEAGLSTGLTYLQVMFSIMIPQAFRSMVPAIVSQLISLVK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SLAV +   +       I  Q    +    I M++ L+L   +  ++  L +K
Sbjct: 159 DTSLAVIISLPEFTHNAKIIYGQNSNYV----IPMYVALTLGYFVICYLLSLLSK 209


>gi|289178331|gb|ADC85577.1| Amino acid ABC transporter permease protein [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 353

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I    +   F + +I L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 170 EFWSIDSQAIITAFNAAWIGLALNEAAYLAEIVRAGLDAVDPGQEEAAKALGMKRSMIMR 229

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR IIPP  ++ + +LK +SL +AV F  DL      I N+  + I ++L+  
Sbjct: 230 RVILPQAMRIIIPPTGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRIYKPIPLLLVAS 289

Query: 372 FIYL 375
             YL
Sbjct: 290 IWYL 293


>gi|332041346|gb|EGI77708.1| polar amino acid ABC transporter inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 240

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++ IAL+ +  A++AE+VR+G+  +PRGQME+A +LGL+  +A R V+LPQA+R+++
Sbjct: 96  QFTTMLIALALFNGAYLAEVVRAGIQGLPRGQMESARSLGLSWLQAMRGVILPQALRNML 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIAL 383
           P L SQ++  +K +SL   +G  ++  +   I  Q     +++ LI    Y  L   ++ 
Sbjct: 156 PSLVSQFVMTIKETSLGYIIGLNEVSFITSQINTQVFVYPVQLYLILGLSYFVLCFSLSR 215

Query: 384 FMNRLNAKIALKEK 397
           F   +  ++  K +
Sbjct: 216 FAYWMERRLERKAR 229


>gi|327189448|gb|EGE56610.1| glutamine ABC transporter ATP-binding protein [Rhizobium etli
           CNPAF512]
          Length = 507

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 111/213 (52%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   V+G+VL++     SR         LP   + T +  GLP +V I           +
Sbjct: 43  VLGVVIGMVLAVMGISQSRWLR------LPA-RVYTDIFRGLPAIVTIL----------I 85

Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L I ALS    A+I EI RSG+ +V RGQMEA  AL +++ 
Sbjct: 86  IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 145

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364
           +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      TG   
Sbjct: 146 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 205

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++L  +F YL +++ +  F+N ++A++ L ++
Sbjct: 206 PLLLAGVF-YLVITVPLTHFVNYIDARLRLGKQ 237


>gi|325063349|gb|ADY67039.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 235

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 2/150 (1%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +PTLV + L Y   F     G  +++ G      F    + L    AA+ +E +RSGL +
Sbjct: 69  VPTLVQLMLWYFGIFTLLPSGLTDWLIGHNAEAIFA--VVGLGLCQAAYFSEDLRSGLRS 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA ALG  +  A R +++PQ +R+ +PPL +  ++L KNSSLA+ +G ++L  
Sbjct: 127 VSPGQMEAAKALGHGYLSAMRFIIMPQGVRNALPPLINHSVSLFKNSSLALIIGASELTH 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
               I N + Q  EI L+   +YL  S++I
Sbjct: 187 AIKEIENLSFQTFEIYLVGTVLYLFFSLLI 216


>gi|238917619|ref|YP_002931136.1| polar amino acid transport system permease protein [Eubacterium
           eligens ATCC 27750]
 gi|238872979|gb|ACR72689.1| polar amino acid transport system permease protein [Eubacterium
           eligens ATCC 27750]
          Length = 506

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 32/210 (15%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKY-----Q 243
           F+ ++G+V+  F   + R  H+KTG    L +I      +I G PT+V + + Y      
Sbjct: 311 FAALMGVVIG-FLIAVVRSNHDKTGHMKILNFICNIYLTVIRGTPTMVQLLIIYYVIFSS 369

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H DK ++                   +A    + A++AEI RSG++++  GQ EAA +L
Sbjct: 370 VHIDKLIVA-----------------ILAFGINSGAYVAEIFRSGIMSIDNGQFEAARSL 412

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+++     V+LPQA ++++P L ++++ LLK +S++  +G  DL   GG II      
Sbjct: 413 GLSYKTTMISVILPQAFKNVLPALANEFIVLLKETSISGYIGLNDLTR-GGDIIRSITYD 471

Query: 364 -----IEIILIWMFIYLSLSIMIALFMNRL 388
                I + +I++ + + LS ++     RL
Sbjct: 472 PMLPLIGVAIIYLVMVMGLSQLVKKLERRL 501



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 8/90 (8%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFRNIPP 141
           T +L G +NT  +AF   +   +IG L+   R + +K     ++ +IC +Y+ V R  P 
Sbjct: 296 TYLLKGLLNTVIIAFFAALMGVVIGFLIAVVRSNHDKTGHMKILNFICNIYLTVIRGTPT 355

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV--LPFGM 169
           +V +  +Y  + S + I D  IV  L FG+
Sbjct: 356 MVQLLIIYYVIFSSVHI-DKLIVAILAFGI 384


>gi|227544923|ref|ZP_03974972.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300910049|ref|ZP_07127509.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|227185090|gb|EEI65161.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300892697|gb|EFK86057.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 503

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 22/194 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG + +L     ++  H     ++ + YI    + G P +V I   Y        
Sbjct: 316 IFGFLLGTLFALMRLSKNKFLH-----SIAVCYIE--FLRGTPMMVQIMFVY-------- 360

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G+ +   P  ++  IA+S  + A++AEI+RSG+ ++P GQ EAA +LG++  
Sbjct: 361 -----FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPLGQTEAARSLGMSKS 415

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++PQA+++I P L ++ + LLK+SSL   +G ++L+     + + T + +  + 
Sbjct: 416 ETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQLVQSATYKGVLPLF 475

Query: 369 IWMFIYLSLSIMIA 382
           I M IY  L+  ++
Sbjct: 476 ITMIIYFILTFTLS 489


>gi|28898396|ref|NP_798001.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|28806613|dbj|BAC59885.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
          Length = 368

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 61/83 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++LPQA++  IP + + 
Sbjct: 238 IGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNT 297

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 298 FIGLFKDTSLVLIIGMFDVLGIG 320


>gi|224541408|ref|ZP_03681947.1| hypothetical protein CATMIT_00570 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525654|gb|EEF94759.1| hypothetical protein CATMIT_00570 [Catenibacterium mitsuokai DSM
           15897]
          Length = 242

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 14/183 (7%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F ++ G+ +   Y+  F   G P +V     Y L   KPVL   NF  G  +       
Sbjct: 61  RFFKQLGRFITGFYVWVFR--GTPMMVQAVFLYYLF--KPVLNWNNFTAGMVI------- 109

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
              +S  TAA++AEI+RSG+ ++  GQMEAA +LG+T+ +    ++ PQA+++  P L +
Sbjct: 110 ---ISINTAAYMAEIIRSGIQSIDAGQMEAAKSLGMTNTQTMINIIFPQAIKNTFPSLGN 166

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++  +K+S +  A+   +L     ++     + IE+ L+   +YL L+ +    +N + 
Sbjct: 167 QFIVNIKDSCMLNAISVVELFFQAQSVAGTNMRYIEVYLVVAILYLILTTVATFVLNYIE 226

Query: 390 AKI 392
            KI
Sbjct: 227 KKI 229


>gi|153811655|ref|ZP_01964323.1| hypothetical protein RUMOBE_02047 [Ruminococcus obeum ATCC 29174]
 gi|149832396|gb|EDM87481.1| hypothetical protein RUMOBE_02047 [Ruminococcus obeum ATCC 29174]
          Length = 223

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 102/175 (58%), Gaps = 23/175 (13%)

Query: 192 FSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           F+ +LG+   L       A R+         + +P++ ++ F+ FG+P        Y L+
Sbjct: 29  FACILGMFFGLLSVLKNKACRIISSIFVDVIRGVPMIVLAYFIYFGVP--------YCLN 80

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
               ++G FNF   +  + +  ++ +AL+C   A++AEI+R+G+++V  GQMEAA +LGL
Sbjct: 81  ---NMMG-FNF---TLTALQAGTVCLALNC--GAYMAEIIRAGILSVDSGQMEAARSLGL 131

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            + +A   V+LPQA+R++IP + +Q++  LK++S+   +GF +LV+    ++  +
Sbjct: 132 PYSRAMIRVVLPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKNVVANS 186



 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 35/70 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y   +L+    T  LA  G+  A I+G   G   +  NK    I  ++V+V R +P +
Sbjct: 6   TRYGNLLLLAMGQTLLLALCGLFFACILGMFFGLLSVLKNKACRIISSIFVDVIRGVPMI 65

Query: 143 VVIFFLYKSV 152
           V+ +F+Y  V
Sbjct: 66  VLAYFIYFGV 75


>gi|16077428|ref|NP_388242.1| cystine ABC transporter permease [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308174|ref|ZP_03590021.1| hypothetical protein Bsubs1_02043 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312496|ref|ZP_03594301.1| hypothetical protein BsubsN3_02029 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221321694|ref|ZP_03602988.1| hypothetical protein BsubsS_02054 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314029|ref|YP_004206316.1| cystine ABC transporter permease [Bacillus subtilis BSn5]
 gi|1175700|sp|P42200|TCYB_BACSU RecName: Full=L-cystine transport system permease protein tcyB
 gi|666982|emb|CAA54725.1| putative membrane spanning subunit [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|1805431|dbj|BAA08993.1| yckJ [Bacillus subtilis]
 gi|2632646|emb|CAB12154.1| cystine ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291482759|dbj|BAI83834.1| hypothetical protein BSNT_00640 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320020303|gb|ADV95289.1| cystine ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 234

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ G++L+L  T L+R    +  + +  +Y+S   I G P LV + + + L      
Sbjct: 40  ILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA--IRGTPLLVQLFIIFYL------ 90

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FN     T+ P F S  IA S    A+ +EI+R+ +++VP+GQ EA   +G+TH+K 
Sbjct: 91  FPAFNV----TLDP-FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKT 145

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369
              V+LPQA R  IPPL++ +++L+K++SLA  +  A+L      I  +    I +I I 
Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIE 205

Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393
                W+  +L LS++  +   RL+  +A
Sbjct: 206 AAFIYWIICFL-LSLVQHVIERRLDRYVA 233


>gi|330684943|gb|EGG96623.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 239

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 95/155 (61%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  K +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKILKGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLLTNDADNQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +R+  + ++LPQA+R  IP L + +L L+K++SL
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181


>gi|324115108|gb|EGC09073.1| ABC transporter [Escherichia fergusonii B253]
          Length = 506

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 14/206 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS VLG +L+L A +  R       +    +YI  +L   +P LVL+   Y L    P L
Sbjct: 34  FSIVLGFILAL-AKQSPRKLFNTPAR----IYI--WLFRSIPLLVLLIFVYNLPQAMPSL 86

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                   S ++  F +  IA+    AA+IAEI R GL+++P+GQ EAA ALG+ +    
Sbjct: 87  A-------SILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQ 139

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V++PQA+R  +P L ++Y+ ++K SSL   +   +++ VG  + +Q    +E +    
Sbjct: 140 WRVVIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVA 199

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
           F Y+ +  +    + RL   + + ++
Sbjct: 200 FYYVFIVTVFDFLLKRLEKYLEVTQR 225


>gi|239827640|ref|YP_002950264.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. WCH70]
 gi|239807933|gb|ACS24998.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. WCH70]
          Length = 219

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 109/217 (50%), Gaps = 37/217 (17%)

Query: 188 KIFVFS----FVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTL 235
           KI VF+    FVLG++L+L   ++ R          +    +  PL+     + FG+P L
Sbjct: 24  KIVVFAVLLGFVLGVILALM--KIGRMKVLTWFADAYTSVFRGTPLVLQLVLIYFGIPQL 81

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + +                         F +  IA    +AA+++EI+R+G++AV +G
Sbjct: 82  TGVEID-----------------------AFPAAVIAFGLNSAAYVSEIIRAGILAVDKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA+ALG+ ++   R ++LPQA+++I+P L ++++ L K S++   +G  D++     
Sbjct: 119 QREAALALGVPYKLMMRDIILPQALKNILPALMNEFITLTKESAVVTVIGAMDVMRRAYI 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  Q  + IE +LI   IY  L +++ L    L  ++
Sbjct: 179 VGGQVYRYIEPLLIAGLIYYVLVMLLTLLGKALEGRL 215


>gi|116672451|ref|YP_833384.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116612560|gb|ABK05284.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 352

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 117/205 (57%), Gaps = 25/205 (12%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALKYQLHF--D 247
           FVLG +L+L   RLS         A PLL    +  +++    P LV + L Y L +  +
Sbjct: 118 FVLGFILALM--RLS---------ASPLLVSVSWTFSWIFRSTPLLVQMLLWYNLGYLYE 166

Query: 248 KPVLG------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           K  LG      +F  +  +T+  +F +  + L+   AA+ AEI+R G+++V +GQ+EAA 
Sbjct: 167 KISLGIPFTDVRFFEVQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGILSVDQGQLEAAA 226

Query: 302 ALGL-THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ALG+   R++TR+VL PQAMR+I+P   ++ + L+K +S+   + +++L      I N+T
Sbjct: 227 ALGIPAWRRSTRIVL-PQAMRAILPTAFNEIIGLVKGTSIVYVLAYSELFYTVQVIYNRT 285

Query: 361 GQAIEIILIWMFIYLSLSIMIALFM 385
            Q + ++L+    Y+ ++ ++++F 
Sbjct: 286 QQVLPLLLVATLWYVVITSVLSVFQ 310


>gi|317153669|ref|YP_004121717.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943920|gb|ADU62971.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 335

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 5/195 (2%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIVL LF T L+R       K   + YI   LI G P LV + + Y  +    ++     
Sbjct: 143 GIVLGLF-TGLARISSNPCLKWSAITYIE--LIRGSPLLVQLLIAY--YVIGTLINNLLV 197

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
             G    P       +L+ +  A++AEIVR+G+ ++ +GQ EAA +LG+T   A R ++L
Sbjct: 198 NAGLPQVPGMWFGIASLAIFAGAYVAEIVRAGIQSIHKGQSEAARSLGMTKAMAMRKIIL 257

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA R I+PPL  Q+++L+K+SSL   +   +L       +  +    E+  +   +YL 
Sbjct: 258 PQAFRRILPPLAGQFISLIKDSSLLGVIAIRELTKATREAVTTSLMPYELYFVCGLMYLL 317

Query: 377 LSIMIALFMNRLNAK 391
           ++  +++F+  L  +
Sbjct: 318 VTFSLSMFVQYLEKR 332


>gi|229590086|ref|YP_002872205.1| glutamine high-affinity transport system; membrane component
           [Pseudomonas fluorescens SBW25]
 gi|229361952|emb|CAY48852.1| glutamine high-affinity transport system; membrane component
           [Pseudomonas fluorescens SBW25]
          Length = 220

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 113/208 (54%), Gaps = 22/208 (10%)

Query: 193 SFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           S  +G V+ L   FA  LSRH   K  + L  +Y++  +I   P LVLI L Y   F  P
Sbjct: 31  SIAIGCVIGLMMAFAM-LSRH---KALRVLASVYVT--VIRNTPILVLILLIY---FALP 81

Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            LG + + I      P F+   I LS Y  A++ E+ R+GL+ +P+G  EA +A+GL   
Sbjct: 82  SLGIRLDKI------PSFI---ITLSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEW 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    + +P  +R+++P L++ +++L K++SLA A+   +L      I  ++ + IE  L
Sbjct: 133 RIRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWL 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +Y++   +IA+ +  L  ++A++ 
Sbjct: 193 VTTALYVAACYLIAMLLRYLEQRLAIRR 220


>gi|255324615|ref|ZP_05365732.1| ABC-type amino acid transport system, permease component
           [Corynebacterium tuberculostearicum SK141]
 gi|311740518|ref|ZP_07714345.1| amino acid ABC superfamily ATP binding cassette transporter
           [Corynebacterium pseudogenitalium ATCC 33035]
 gi|255298521|gb|EET77821.1| ABC-type amino acid transport system, permease component
           [Corynebacterium tuberculostearicum SK141]
 gi|311304038|gb|EFQ80114.1| amino acid ABC superfamily ATP binding cassette transporter
           [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 317

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 4/130 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA++AEIVRSG+ +VP GQ EA+ ALG++     R  +LPQAMR IIPP  ++
Sbjct: 160 MGLGLNEAAYMAEIVRSGITSVPEGQKEASKALGMSWWMTMRRTVLPQAMRIIIPPTGNE 219

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILI---WMFIYLSLSIMIALFMN 386
           +++LLK SSL VA+ + + +    T I+    Q I ++L+   W  +  SL ++   F+ 
Sbjct: 220 FISLLKTSSLVVAIPYTEEIFGRSTDISAALFQPIPLLLVAASWYLVVTSLLMVGQYFLE 279

Query: 387 RLNAKIALKE 396
           R   + A +E
Sbjct: 280 RRFERGATRE 289


>gi|310816974|ref|YP_003964938.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Ketogulonicigenium vulgare Y25]
 gi|308755709|gb|ADO43638.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Ketogulonicigenium vulgare Y25]
          Length = 457

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 8/113 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ ++AA+IAE+VR GL A+P+GQ EAA ALGL + +A RL++LPQA++  IP + + 
Sbjct: 328 IMVTLFSAAYIAEVVRGGLAAIPKGQYEAADALGLDYWRAMRLIILPQALKISIPGIVNT 387

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           ++ L K+++L V +G  D V++  +I   T         W  IY  L + + L
Sbjct: 388 FIGLFKDTTLVVFIGMMDPVNLLNSIRANTA--------WNGIYWELFLFVGL 432


>gi|149181761|ref|ZP_01860252.1| amino acid ABC transproter, permease [Bacillus sp. SG-1]
 gi|148850502|gb|EDL64661.1| amino acid ABC transproter, permease [Bacillus sp. SG-1]
          Length = 215

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 79/131 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S+ + L+ +  A+IAEI R  + ++ +GQMEA  +LG+++    R ++LPQA R  +P
Sbjct: 85  FWSVVLGLAFHNGAYIAEIFRGTIQSIDKGQMEAGRSLGMSNGLTMRRIILPQAFRRALP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  LK+SSLA  +G  +L SV  T+ +     +  +LI    YL L +  ++ +
Sbjct: 145 PLGNQFIIALKDSSLASFIGMYELFSVATTLGSNNFDYMTYLLIVAVYYLVLVLFFSVIV 204

Query: 386 NRLNAKIALKE 396
           N +  +++L +
Sbjct: 205 NFVEKRMSLSD 215


>gi|209546625|ref|YP_002278543.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537869|gb|ACI57803.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 235

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 17/166 (10%)

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFN--FIGGSTVSP----EFMSLY--------IALSC 275
           FG P   L+A     H + P L Q    + G  T+ P    E++S++        I L  
Sbjct: 54  FGDP---LVAAYVSYHRNVPTLVQLMLWYFGIFTLMPSGLGEWLSVHNAEAIFAVIGLGL 110

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +RSG+ +V  GQMEAA ALG  +  A R V++PQ +R+ +PPL +  ++L 
Sbjct: 111 CQAAYFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLF 170

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           KNSSLAV +G ++L      I N + +  EI LI   +YL  S++I
Sbjct: 171 KNSSLAVIIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVI 216


>gi|146278535|ref|YP_001168694.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556776|gb|ABP71389.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 392

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 57/78 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + +A RL++LPQA++  IP + S 
Sbjct: 262 IMVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWRAQRLIILPQALKISIPGIVST 321

Query: 331 YLNLLKNSSLAVAVGFAD 348
           ++ L K+++L V VG  D
Sbjct: 322 FIGLFKDTTLVVFVGLLD 339


>gi|290963274|ref|YP_003494456.1| amino acid permease [Streptomyces scabiei 87.22]
 gi|260652800|emb|CBG75933.1| putative amino acid permease [Streptomyces scabiei 87.22]
          Length = 296

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 21/164 (12%)

Query: 196 LGIVLS-----LFAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LGIVL+     LFAT R+S H    T   +P   +  F    +P L+LI   +       
Sbjct: 78  LGIVLAGSFGLLFATARMSEH----TWIRVPAAAVVEFF-RAVPLLLLIFCAF------- 125

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             G F   G  TVSP F ++ + L+ Y  + IAE +R+G+ ++P+GQ EAA ALG+   +
Sbjct: 126 -FGSFALTG-QTVSP-FTAVVLGLTLYNGSVIAETLRAGVNSLPKGQAEAARALGMPKSQ 182

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
              LVL+PQA+ +++P + SQ++ LLK+S+L   VG+ +LV  G
Sbjct: 183 TMALVLMPQAIVAMMPAIVSQFVVLLKDSALGFIVGYDELVDRG 226


>gi|300697544|ref|YP_003748205.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074268|emb|CBJ53813.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CFBP2957]
          Length = 233

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 14/151 (9%)

Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290
           H + P L Q  F + G ST+ P            E +   +AL    AA+ +E +RSGL 
Sbjct: 66  HCNVPTLVQLMFWYFGISTLFPLPMLDWLADHHSEAVFSIVALGLCQAAYFSEDLRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA ALG +     R VL+PQA+R+ +P L +  ++L KNSSLA+A+G  +L 
Sbjct: 126 AIPPGQEEAARALGNSFIGTLRYVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVTELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                I N + +A E  L+   +YL  S++I
Sbjct: 186 HAVKEIENTSFRAFESYLLATVVYLGFSLVI 216


>gi|322419252|ref|YP_004198475.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320125639|gb|ADW13199.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 261

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 81/130 (62%), Gaps = 4/130 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +S  IA++    A++ E+VR+G+ ++ +GQ EAA++LG+  R+A   V+LPQA++ I
Sbjct: 129 PAILSAIIAMAVCYGAYMGEVVRAGIESIAKGQREAALSLGMNGRQAMIHVILPQAVKVI 188

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379
           +PP+ ++++ LLK+SSL   +  ADL+  G    +++    E    I LI++ I L  S 
Sbjct: 189 LPPVGNEFIALLKDSSLVSIIAVADLLRRGREYASESFTYFETYTVIALIYLIITLFFSK 248

Query: 380 MIALFMNRLN 389
           +I +   R++
Sbjct: 249 IIGVMEERVS 258



 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 40/68 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF +    ++ A +IG + G GR+S N+       +YVE+ R IP LV IF++Y +
Sbjct: 62  GIAVTFQVTLGAILLAIVIGLVTGLGRISKNRFFNGAASLYVEIIRGIPLLVQIFYIYYA 121

Query: 152 VLSVLPIP 159
           + +V+ +P
Sbjct: 122 LGTVVKVP 129


>gi|213966207|ref|ZP_03394392.1| glutamate ABC transport system, permease protein [Corynebacterium
           amycolatum SK46]
 gi|213951142|gb|EEB62539.1| glutamate ABC transport system, permease protein [Corynebacterium
           amycolatum SK46]
          Length = 318

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 92/161 (57%), Gaps = 8/161 (4%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LVL+   Y + F    L   N++G       F ++   L+ Y  + I E +RSG+ +
Sbjct: 122 IPVLVLMLFAYSV-FAIWQLFPSNYLG-------FAAVVFGLTMYNGSVIGETLRSGIES 173

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAAIALGL+HR+    +LLPQA+ +++P + SQ +  LK+S+L   +G+ ++V 
Sbjct: 174 LPKGQREAAIALGLSHRQTMVTILLPQAVAAMLPAIISQMVIALKDSALGYMIGYVEVVR 233

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  +    G  I  +++   I ++++  +A    R+ +++
Sbjct: 234 SGRQLGEYYGAMIPSLVVVAIILIAINFGLANLAERIESQL 274



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+++  FE ++    +   +++ T IL G V+T   A   ++ A +IG L+G GRLS   
Sbjct: 48  LADKGQFESNKWSF-FLESTTWTTYILPGLVSTIIAAVVSIVLALVIGALLGVGRLSPIA 106

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK 150
            V W+C V VE FR IP LV++ F Y 
Sbjct: 107 PVRWLCSVIVEFFRAIPVLVLMLFAYS 133


>gi|254512979|ref|ZP_05125045.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11]
 gi|221532978|gb|EEE35973.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11]
          Length = 293

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 64/94 (68%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F G     P  +S  I L+ + +AF+ EIVR+G+ ++P+GQ EAA ++G++  +  R V+
Sbjct: 154 FFGEMRRFPSLISGVIVLALFESAFVGEIVRAGIQSIPKGQREAARSIGMSRLQELRYVV 213

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           LPQAM+ ++PPL +Q+++L+K+SS+   +   +L
Sbjct: 214 LPQAMKKVVPPLANQFISLIKDSSILSLISVQEL 247


>gi|59712141|ref|YP_204917.1| amino-acid transporter permease [Vibrio fischeri ES114]
 gi|59480242|gb|AAW86029.1| predicted amino-acid transporter permease [Vibrio fischeri ES114]
          Length = 365

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 60/83 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE+VR GL A+P+GQ EAA ALGL + K  RL++LPQA++  IP + + 
Sbjct: 235 IGVVLFSAAYMAEVVRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317


>gi|110347171|ref|YP_665989.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283282|gb|ABG61342.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Chelativorans sp. BNC1]
          Length = 230

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 88/163 (53%), Gaps = 3/163 (1%)

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +L L+ + +  +F  P +G +  IG S       F S  I  + + AA+ +EI+R+G+ +
Sbjct: 67  SLPLVLVIFWFYFLVPYIGAW-LIGASQPIAVGAFASALITFTLFEAAYFSEIMRAGIQS 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  A  A+GL + +    ++LPQA R+++P + +Q + L +++SL   +   D + 
Sbjct: 126 IPRGQTGAGYAIGLNYSQVMGYIVLPQAFRNMLPVMLTQTIILFQDTSLVYVISLTDFLG 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               +  + G+ +E+ L    IY  +S   +  + RL A+ A+
Sbjct: 186 AASKVAQRDGRLVEMYLFAAIIYFVISFAASFLVKRLEARTAI 228


>gi|327470644|gb|EGF16100.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 226

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%)

Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + + P+L QF         +   T+ P  + +  + +  Y  A+IAE++RSG+ ++PR
Sbjct: 63  EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           GQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S    +   DL+ V
Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180


>gi|325000380|ref|ZP_08121492.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia sp. P1]
          Length = 306

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 74/123 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS   +A++AEI+R+G++ V  GQ EAA A+G T  +    ++LPQAMR IIPP  SQ
Sbjct: 171 IGLSLVQSAYMAEIIRAGILGVDHGQREAASAMGFTPAQTFFRIILPQAMRVIIPPSGSQ 230

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K ++L   +   DL+     I NQT + + ++++    YL++  ++ +   RL  
Sbjct: 231 FITVVKGTALVSVIAMNDLLHSVQVIYNQTYEIVPMLIVACLWYLTVVTLLTIGQRRLER 290

Query: 391 KIA 393
           + A
Sbjct: 291 RFA 293



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++  +  ++L G   T  LA   M+  +++G  + A +LS      W   VYV VFR IP
Sbjct: 67  AEHLFDPSVLRGLGTTMLLAVLAMLIGSVLGGALAAAQLSDFGPTRWAATVYVGVFRGIP 126

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           PLV + F +   L+ L +P  SI +PFG
Sbjct: 127 PLVQLIFWFN--LAYL-LPRISIGVPFG 151


>gi|226366162|ref|YP_002783945.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226244652|dbj|BAH55000.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 299

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 35/226 (15%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   VF+ +LG +L +   RLS H         P+ +++  ++     +P L+L+
Sbjct: 73  TLVAAAVSIVFALILGAILGI--GRLSDHR--------PVRWVAGGIVELFRAIPVLILM 122

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC-------YTAAFIAEIVRSGLIA 291
              YQL  +  V               F S Y+AL+        Y  + IAEIVR+G+ +
Sbjct: 123 IFSYQLFAEYEV---------------FKSKYLALAAVIVGLTLYNGSVIAEIVRAGINS 167

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA+ALG+   +  R +LLPQA+ +++P + SQ +  LK+S+L   +G+ ++V 
Sbjct: 168 LPKGQSEAAMALGMRKSQVMRTILLPQAVTAMLPAIISQMVVALKDSALGYLIGYVEVVR 227

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            G  +    G  +  +++   I + L+  + +   R+  ++    K
Sbjct: 228 SGQQLGAFYGNYLPALIVVAIIMIILNYTLTVVATRVEKRLRAARK 273



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 59  LGIGFLSERAGFEIDQGIV------PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112
           LGIG+L   A    D+G +      P+T  +S+ T ++ G   T   A   ++ A I+G 
Sbjct: 32  LGIGYLVYAA--LDDKGQLTAAKWEPFTESTSWTTYLIPGIRGTLVAAAVSIVFALILGA 89

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           ++G GRLS ++ V W+    VE+FR IP L+++ F Y+
Sbjct: 90  ILGIGRLSDHRPVRWVAGGIVELFRAIPVLILMIFSYQ 127


>gi|86360227|ref|YP_472116.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284329|gb|ABC93389.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 218

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 69/111 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA+ +E +RSG+ +V  GQMEAA ALG  +  A R V++PQ +R+ +PPL + 
Sbjct: 89  IGLGLCQAAYFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINH 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L KNSSLAV +G ++L      I N + +  EI LI   +YL  S++I
Sbjct: 149 SVSLFKNSSLAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVI 199


>gi|315124439|ref|YP_004066443.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315018161|gb|ADT66254.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 233

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 16/175 (9%)

Query: 221 LLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCY 276
           L ++STF   LI G P LV + L Y +  +   LG  N ++ G           I LSC+
Sbjct: 68  LRFLSTFYIELIRGTPLLVQVLLMYYIIANN--LGLDNRYVAGV----------IILSCF 115

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +A ++AEI R+G++++   Q+E+A ALGL   +    V+ PQA+++I+ PL+ Q+ NL+K
Sbjct: 116 SATYLAEIFRAGILSISISQLESARALGLKEMQVFAYVIFPQALKNILAPLSGQFANLIK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL   +   +L      I + T   +E  +I    YL L++ I++F   L  K
Sbjct: 176 DSSLLSVIAVNELTQSAQEINSYTFATLEAYVILAITYLILTLPISIFSRYLERK 230



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 42/82 (51%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + +
Sbjct: 11  CSFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRF 70

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           +   Y+E+ R  P LV +  +Y
Sbjct: 71  LSTFYIELIRGTPLLVQVLLMY 92


>gi|221317432|ref|ZP_03598726.1| hypothetical protein BsubsJ_02043 [Bacillus subtilis subsp.
           subtilis str. JH642]
          Length = 234

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 113/209 (54%), Gaps = 21/209 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ G++L+L  T L+R    +  + +  +Y+S   I G P LV + + + L      
Sbjct: 40  ILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA--IRGTPLLVQLFIIFYL------ 90

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FN     T+ P F S  IA S    A+ +EI+R+ +++VP+GQ EA   +G+TH+K 
Sbjct: 91  FPAFNV----TLDP-FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKT 145

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369
              V+LPQA R  IPPL++ +++L+K++SLA  +  A+L      I  +    I +I I 
Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIE 205

Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393
                W+  +L LS++  +   RL+  +A
Sbjct: 206 AAFIYWIICFL-LSLVQHVIERRLDRYVA 233


>gi|57504978|ref|ZP_00370930.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|305432022|ref|ZP_07401189.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|57019250|gb|EAL55956.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|304445106|gb|EFM37752.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 250

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 37/214 (17%)

Query: 150 KSVLSVLPIPDHSIVLPFGM--FLN--NRGLSFPT---LTMDTNAKIFVFSFVLGIVLSL 202
           + +LS   + D S   PF +  FL+  + G +F +    T++ +    + + V G +  +
Sbjct: 12  RQLLSSWGLYDESSTNPFAIWKFLDALDNGDAFISGFIYTLEVSILALLIAIVFGTIGGV 71

Query: 203 FAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            AT      R     + +  + +PL+    FL F LP L        +H D   +G    
Sbjct: 72  MATSKIKILRAYTRVYVELFQNIPLVIQIFFLYFALPGL-------GIHLDIFTIG---- 120

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                         + +  Y  A+++E+VRSG+++VPRGQ EA+ + G T+ +  R +++
Sbjct: 121 -------------VLGIGAYHGAYVSEVVRSGILSVPRGQFEASASQGFTYVQQMRYIIV 167

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           PQ ++ I+PP+T+Q +NL+KN+S+ + +G A+L+
Sbjct: 168 PQTIKIILPPMTNQMVNLIKNTSVLLIIGGAELM 201



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A + GF+ T  ++   ++ A + GT+ G    S  K++    RVYVE+F+NIP ++ I
Sbjct: 41  GDAFISGFIYTLEVSILALLIAIVFGTIGGVMATSKIKILRAYTRVYVELFQNIPLVIQI 100

Query: 146 FFLY 149
           FFLY
Sbjct: 101 FFLY 104


>gi|255029025|ref|ZP_05300976.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes LO28]
          Length = 149

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 19  FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 78

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 79  ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 109


>gi|222087817|ref|YP_002546355.1| ABC transporter membrane spanning protein (opine) [Agrobacterium
           radiobacter K84]
 gi|221725265|gb|ACM28421.1| ABC transporter membrane spanning protein (opine) [Agrobacterium
           radiobacter K84]
          Length = 278

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 17/204 (8%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FV+ + L       +RH    +G  L    I T++  G P LV + L Y        LGQ
Sbjct: 32  FVVSVPLGFLRASSNRHL---SGCVL----IYTYVFRGTPLLVQLFLIYY------GLGQ 78

Query: 254 FNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              +  S   P     F    +ALS  +AA+  E+ R+G+ AVPRG +EAA ALGL+   
Sbjct: 79  LEIVRNSMFWPLLREPFWCALLALSLNSAAYTTEVFRAGIQAVPRGVVEAAQALGLSRIM 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RL++ P A R+++P   ++ + +LK SSLA  V   ++  +   ++++T    EI L 
Sbjct: 139 QIRLIIFPLAFRTVLPSYANEVIGMLKASSLASTVTLLEITGLARRMVSETFAPYEIFLA 198

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              IYL L+ +I+     L   +A
Sbjct: 199 AGLIYLFLTFVISKLFQMLETHLA 222


>gi|241206848|ref|YP_002977944.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860738|gb|ACS58405.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 226

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 14/203 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SFV G+ L L AT ++R F      A+   Y+  ++I G P LV +   + + +  P 
Sbjct: 28  LLSFVFGLALGL-ATAIARLFGPMPLSAVARFYV--WVIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A
Sbjct: 82  LG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
               +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T + + + +  
Sbjct: 134 MSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IYL LS +++    RL  + A
Sbjct: 194 ALIYLVLSSVLSQLQVRLERRFA 216


>gi|300313150|ref|YP_003777242.1| glutamate/aspartate ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300075935|gb|ADJ65334.1| ABC-type glutamate/aspartate transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 249

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 79/128 (61%), Gaps = 1/128 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F++  +AL  +T++ +A  V +G+ A+PRGQ  A  ALGLT  +  R VLLP A R II
Sbjct: 106 SFVTATLALGFFTSSRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIII 165

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P LT+++  ++KNSS+A+ +G  +L +   ++   T Q  E +     IY+ +S+ IALF
Sbjct: 166 PALTNEFAAIIKNSSVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISV-IALF 224

Query: 385 MNRLNAKI 392
           M RL  K+
Sbjct: 225 MARLLEKV 232



 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 12/102 (11%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T   A    I A I+GT+ G  R +    V  I   YVE+FRNIP LV 
Sbjct: 20  YIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPWVVRIANGYVELFRNIPLLVQ 79

Query: 145 IFFLYKSVLSVLP---------IPDHSIV---LPFGMFLNNR 174
           +F  Y  +  +LP         +PD S V   L  G F ++R
Sbjct: 80  MFLWYFVMPELLPAFIGDWIKSLPDASFVTATLALGFFTSSR 121


>gi|37679739|ref|NP_934348.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37198484|dbj|BAC94319.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 372

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 227 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 286

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 287 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 324


>gi|237802191|ref|ZP_04590652.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331025048|gb|EGI05104.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 229

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   VL I L +   R SR +   + +ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLVLAIPLGI--ARASRLW---SVRALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +    + P     F    I ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFDVVRQGPLWPYLRDPFWCAVITMTLHTAAYIAEILRGAIQAVPVG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EVEAARALGMSKWKALFYIVLPRATRIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYMPVEI 195


>gi|254229977|ref|ZP_04923378.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. Ex25]
 gi|262392807|ref|YP_003284661.1| putative amino acid ABC transporter permease [Vibrio sp. Ex25]
 gi|151937479|gb|EDN56336.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. Ex25]
 gi|262336401|gb|ACY50196.1| putative amino acid ABC transporter permease protein [Vibrio sp.
           Ex25]
          Length = 246

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 64/102 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL++ +   LV+LPQA R I+
Sbjct: 114 HFWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMHLVILPQAFRQIL 173

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           PPL +Q++ +LK SSL   +G +DL      ++      +EI
Sbjct: 174 PPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEI 215


>gi|323351208|ref|ZP_08086864.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322122432|gb|EFX94143.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 226

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%)

Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + + P+L QF         +   T+ P  + +  + +  Y  A+IAE++RSG+ ++PR
Sbjct: 63  EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           GQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S    +   DL+ V
Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180


>gi|315654090|ref|ZP_07907006.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|315488786|gb|EFU78432.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
          Length = 535

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+R+ +P +T++++
Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388
             +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  I     L  N+L
Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509

Query: 389 NA 390
             
Sbjct: 510 EG 511



 Score = 36.2 bits (82), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134
           Y   IL G + T +L+  G I    IG LVG  R              KL+ W+  VYVE
Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPISKVKYWLLKLINWLLAVYVE 354

Query: 135 VFRNIPPLVVIFFLY 149
           +FR  P +V    +Y
Sbjct: 355 IFRGTPMMVQAAVIY 369


>gi|150018983|ref|YP_001311237.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149905448|gb|ABR36281.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 242

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 60/89 (67%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P F+   + +  Y  A+I+E+VR+G+ ++P+GQ EAA + G +H +  R ++LPQ ++
Sbjct: 89  VLPVFLIGILGVGVYHGAYISEVVRTGITSIPKGQFEAAKSQGFSHTQTMRYIILPQTVK 148

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            IIPPL +Q +NL+KN+S+   +   DL+
Sbjct: 149 IIIPPLANQLVNLIKNTSVLAMIAGGDLM 177



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF+ T  ++  G+I A ++G + G    S  K+   I R+YVEV +N P ++ +FFL+
Sbjct: 21  LEGFLTTLEVSILGLILALMLGIIFGVLSTSKIKIFKVINRIYVEVIQNTPLVIQVFFLF 80

Query: 150 KSVLSVLPIPDHSIVLP 166
                   +P   +VLP
Sbjct: 81  NG------LPYIKVVLP 91


>gi|269963237|ref|ZP_06177571.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269832042|gb|EEZ86167.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 306

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 80/144 (55%)

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           +P   Q  F G + +     S  + +   ++A+IAE+VR+GL +V +GQ EAA +LGL+ 
Sbjct: 157 EPNAVQHFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSR 216

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R ++ PQ +++I P L  Q ++L+K++S+   +   ++  VG  + N +G   EI 
Sbjct: 217 WVKYRFIIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIW 276

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           LI  F+Y  +   +++F   +  K
Sbjct: 277 LIVGFVYFLICFGLSMFFRYIEKK 300


>gi|118473702|ref|YP_887060.1| glutamate permease [Mycobacterium smegmatis str. MC2 155]
 gi|118174989|gb|ABK75885.1| glutamate permease [Mycobacterium smegmatis str. MC2 155]
          Length = 226

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 77/137 (56%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S     F    + L+ YTA+F+ E +RSG+  VP GQ EAA +LG T  +  R +LLPQA
Sbjct: 90  SIADSNFRLAVLGLTVYTASFVCETIRSGVNTVPLGQAEAARSLGFTFGQNLRYILLPQA 149

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R++I PL S  + L+KN+++A A+G A+   +   +I  T   + +  I    ++ L++
Sbjct: 150 FRAVIIPLGSVLIALIKNTTIASAIGVAEAALLMKAMIENTAALLTVGTIMALGFILLTL 209

Query: 380 MIALFMNRLNAKIALKE 396
            + LF   L  ++A+  
Sbjct: 210 PVGLFFGWLGKRLAVAR 226



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 31/65 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   I   F  T  L     + A I+GT++ A RL+   ++ W+   YV V RN P  
Sbjct: 5   DEYRDEIFAAFWTTIQLTVYSAVGALILGTVLAAMRLAPVPVMNWMGTAYVNVVRNTPLT 64

Query: 143 VVIFF 147
           ++I F
Sbjct: 65  LIILF 69


>gi|312874740|ref|ZP_07734759.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311089485|gb|EFQ47910.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
          Length = 535

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+R+ +P +T++++
Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388
             +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  I     L  N+L
Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509

Query: 389 NA 390
             
Sbjct: 510 EG 511



 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134
           Y   IL G + T +L+  G I    IG LVG  R              KL+ W+  VYVE
Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354

Query: 135 VFRNIPPLVVIFFLY 149
           +FR  P +V    +Y
Sbjct: 355 IFRGTPMMVQAAVIY 369


>gi|309807608|ref|ZP_07701556.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
 gi|309809764|ref|ZP_07703618.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169144|gb|EFO71214.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308169943|gb|EFO71982.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 535

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+R+ +P +T++++
Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388
             +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  I     L  N+L
Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509

Query: 389 NA 390
             
Sbjct: 510 EG 511



 Score = 36.2 bits (82), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134
           Y   IL G + T +L+  G I    IG LVG  R              KL+ W+  VYVE
Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354

Query: 135 VFRNIPPLVVIFFLY 149
           +FR  P +V    +Y
Sbjct: 355 IFRGTPMMVQAAVIY 369


>gi|228992897|ref|ZP_04152822.1| Arginine transport system permease protein artQ [Bacillus
           pseudomycoides DSM 12442]
 gi|228998942|ref|ZP_04158525.1| Arginine transport system permease protein artQ [Bacillus mycoides
           Rock3-17]
 gi|229006473|ref|ZP_04164126.1| Arginine transport system permease protein artQ [Bacillus mycoides
           Rock1-4]
 gi|228754786|gb|EEM04178.1| Arginine transport system permease protein artQ [Bacillus mycoides
           Rock1-4]
 gi|228760817|gb|EEM09780.1| Arginine transport system permease protein artQ [Bacillus mycoides
           Rock3-17]
 gi|228766946|gb|EEM15584.1| Arginine transport system permease protein artQ [Bacillus
           pseudomycoides DSM 12442]
          Length = 219

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 80/129 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ +RK  + ++LPQA+++I
Sbjct: 87  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGVPYRKMMKNIILPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    +Y  L I++ L
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLVYYILVIILTL 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKAIEGRM 215


>gi|170748674|ref|YP_001754934.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170655196|gb|ACB24251.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 240

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 78/133 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L  +TA+ +AE VR+G+ ++PRGQ  A  A+G T  +  R VLLP A R I+P
Sbjct: 108 FYTAVVCLGFFTASRVAEQVRAGIQSLPRGQRMAGTAMGFTTYQTYRYVLLPNAYRIILP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS++LN LKN+S+A+ +G  +L +   ++   + Q  E       +Y+ +++++    
Sbjct: 168 PMTSEFLNNLKNTSVALTIGLLELTARARSMQEFSFQVFEAFTAATILYVIINLVVVTAA 227

Query: 386 NRLNAKIALKEKK 398
             L   +A+  ++
Sbjct: 228 TFLEKAVAIPGQR 240



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 12/105 (11%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + +Y   +L G + T   A    + A  +G+L+G  R   +K    I   YVE+FRN+P 
Sbjct: 18  NGTYLDMLLSGLMWTITTALCSWVIAFFLGSLIGVLRTLPSKPANAIGTAYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP---------IPD---HSIVLPFGMFLNNR 174
           LV +F  Y  +  V+P         +PD   ++ V+  G F  +R
Sbjct: 78  LVQMFLWYFVLPEVVPTRIGDAIKQLPDAPFYTAVVCLGFFTASR 122


>gi|108802342|ref|YP_642539.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119871495|ref|YP_941447.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|126438322|ref|YP_001074013.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|108772761|gb|ABG11483.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. MCS]
 gi|119697584|gb|ABL94657.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
 gi|126238122|gb|ABO01523.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. JLS]
          Length = 591

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 20/206 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   VLG+ L++     SR              + T +  GLP +V+I L          
Sbjct: 379 VIGLVLGMALAVAGISRSRLLRWPA-------RVYTDIFRGLPEVVIILLIG-------- 423

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG    +GG T +  F     AL    AA+I EI RSG+ +V  GQ+EA+ ALG ++  +
Sbjct: 424 LGVGPIVGGLTGNNPFPLGIAALGLMAAAYIGEIFRSGIQSVESGQLEASRALGFSYSSS 483

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEI 366
            RLV++PQ +R ++P L +Q+++LLK SSL   +G      +L  VG  +  QTG    +
Sbjct: 484 MRLVVIPQGVRRVLPALMNQFISLLKASSLVYFLGLVADQRELFQVGRDLNAQTGSLSPL 543

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +F YL L+I +   +N ++A++
Sbjct: 544 VAAGLF-YLLLTIPLTHLVNYVDARL 568



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            G  NT  L  S  +   ++G  +    +S ++L+ W  RVY ++FR +P +V+I  +
Sbjct: 365 TGLPNTLILTVSAAVIGLVLGMALAVAGISRSRLLRWPARVYTDIFRGLPEVVIILLI 422


>gi|312872684|ref|ZP_07732749.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311091726|gb|EFQ50105.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
          Length = 535

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+R+ +P +T++++
Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388
             +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  I     L  N+L
Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509

Query: 389 NA 390
             
Sbjct: 510 EG 511



 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134
           Y   IL G + T +L+  G I    IG LVG  R              KL+ W+  VYVE
Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354

Query: 135 VFRNIPPLVVIFFLY 149
           +FR  P +V    +Y
Sbjct: 355 IFRGTPMMVQAAVIY 369


>gi|296117708|ref|ZP_06836292.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
 gi|295969439|gb|EFG82680.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
          Length = 312

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 94/163 (57%), Gaps = 15/163 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + + + G+VL L   RLS H   +  + +  + +  F    +P L+L+   YQL      
Sbjct: 82  ILACIFGVVLGL--GRLSEH---RIVRWICGVIVEFFR--AIPVLLLMIFAYQL------ 128

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              ++ +    ++  F ++ +AL+ Y  + IAEI+RSG+ ++P+GQ EAA A+GL+HR  
Sbjct: 129 FAVYDLVPSQQLA--FSAVVLALTLYNGSVIAEILRSGIRSLPKGQTEAAKAIGLSHRLT 186

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
              VLLPQA+ S++P L +Q +  LK+S+L   +G+ ++V  G
Sbjct: 187 MYRVLLPQAIASMLPALIAQMVIALKDSALGYQIGYVEIVRSG 229



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 22/141 (15%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R +N    +I A++   +  W    + NN +                
Sbjct: 4   RATVLYDAPGPKGRRNNRIYSVIAAVIFLAVIAWVAWTLNNNGQ---------------- 47

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           FE  +   P+    ++ T +L G   T + AF+ +I A I G ++G GRLS +++V WIC
Sbjct: 48  FE-SRLWTPFLQSQTWTTYLLPGLRGTLFSAFASIILACIFGVVLGLGRLSEHRIVRWIC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYK 150
            V VE FR IP L+++ F Y+
Sbjct: 107 GVIVEFFRAIPVLLLMIFAYQ 127


>gi|241895818|ref|ZP_04783114.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241870861|gb|EER74612.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 218

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 30/190 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      + SF++G +L +       +  +  G      + LPLL I  F  F LP 
Sbjct: 22  VTIEVAVVSIILSFIIGSILGVIRYVKIPYLSQIVGFIIDLIRNLPLLLIIFFTYFALP- 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                 K  +HF            G   S  F     AL+ + +  +AEI+RSG++AVP+
Sbjct: 81  ------KIGIHF------------GVITSTIF-----ALTIFESTMLAEIIRSGIMAVPK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+E A++ GL  ++A   ++LPQA + +IPP+ SQ+++L+K++SLA  +   ++     
Sbjct: 118 GQLEGALSNGLNFKQALWHIILPQAYKKMIPPIVSQFVSLIKDTSLATIIMLPEVTYRAQ 177

Query: 355 TIINQTGQAI 364
            +  Q   AI
Sbjct: 178 IVYAQEPSAI 187


>gi|227823543|ref|YP_002827516.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227342545|gb|ACP26763.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 221

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 25/239 (10%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D SI+L F   L         L + T  K+ +   VLG  L  F   L+R       +A+
Sbjct: 4   DFSIILRFQEAL--------ALGLWTTIKLTLICVVLGCSLGFF-IGLARTSRSTVLRAI 54

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +Y+  F   G P LV +   + + F  P++               +S  IAL+ Y  A
Sbjct: 55  SSVYVEFFR--GTPVLVQL---FWIFFCLPLILDVEL-------SNLISGVIALTLYMGA 102

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
             +E  R+ L ++   Q++A +ALGL  R     V+LPQA+   IP L S  ++L K S+
Sbjct: 103 ISSETFRASLKSIGPEQLDACVALGLPRRVQVTSVILPQAVLRAIPTLLSNCVSLFKESA 162

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  AVG ADL+ VG  I N T + IE++    LI+  I   L+  + L   R+ AK+A+
Sbjct: 163 LVSAVGMADLMFVGQNISNNTARPIEVLTVVALIYFLIAFPLTRAVTLVERRVLAKLAI 221


>gi|119961621|ref|YP_948805.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119948480|gb|ABM07391.1| putative amino acid ABC transporter, permease protein [Arthrobacter
           aurescens TC1]
          Length = 263

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 79/131 (60%), Gaps = 4/131 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L    AA+IAE +R+GL AVP+GQMEAA +LG+ H +A   +++PQA + ++PPLT++
Sbjct: 133 VSLGMVAAAYIAETLRAGLQAVPKGQMEAARSLGMPHWRAMVSIVIPQAFKIVLPPLTNE 192

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K+SSL   +G      +L   G   I+  G  +  +L+    YL ++I ++L   
Sbjct: 193 IILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFYLVITIPLSLLAR 252

Query: 387 RLNAKIALKEK 397
           +  ++ A  ++
Sbjct: 253 KFESRSARTKR 263


>gi|327463113|gb|EGF09434.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
          Length = 226

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%)

Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + + P+L QF         +   T+ P  + +  + +  Y  A+IAE++RSG+ ++PR
Sbjct: 63  EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           GQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S    +   DL+ V
Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180


>gi|315925477|ref|ZP_07921688.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621378|gb|EFV01348.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 221

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 75/122 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+    A++AEI R G+ +V +GQMEAA +LGL H  A R V+LPQA+R++IP + +Q
Sbjct: 97  ITLTLNAGAYLAEIFRGGIQSVDKGQMEAARSLGLPHGMAMRKVILPQAIRTMIPAIVNQ 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  LK+SS+   +G A+L  VG  II    ++  + LI   +Y  + ++++    R+  
Sbjct: 157 CIITLKDSSILSVIGMAELTQVGKLIIANNLESFRMWLIVGIMYFIIIMILSWVSKRIEK 216

Query: 391 KI 392
           ++
Sbjct: 217 RL 218



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 35/68 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T       ++ A ++G L G   +S NK+   I RVYV++ R  P +V  FF+
Sbjct: 18  LLQGLAVTLESTLLSLVLAAVVGLLFGLLSVSRNKVSRAIARVYVDIIRGTPIIVQAFFI 77

Query: 149 YKSVLSVL 156
           Y  V S L
Sbjct: 78  YFGVTSAL 85


>gi|197335791|ref|YP_002156347.1| general L-amino acid transport system permease protein AapM [Vibrio
           fischeri MJ11]
 gi|197317281|gb|ACH66728.1| general L-amino acid transport system permease protein AapM [Vibrio
           fischeri MJ11]
          Length = 365

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 60/83 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE+VR GL A+P+GQ EAA ALGL + K  RL++LPQA++  IP + + 
Sbjct: 235 IGVVLFSAAYMAEVVRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317


>gi|170741792|ref|YP_001770447.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196066|gb|ACA18013.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 220

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 5/136 (3%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP   SL +ALSCY  +F AEI+R+G++++  GQ EA  ALG+T  +  R ++LPQ
Sbjct: 84  GLEMSPVTASL-LALSCYGGSFYAEIIRAGIVSIDAGQGEAGAALGMTPGQTMRRIILPQ 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIY 374
           A R ++PPL +Q +  LKN+SL   +   DLV       + + + +E    + + +  I 
Sbjct: 143 AFRRMVPPLMNQSIIQLKNTSLVSVLAVPDLVYQAQVAAHDSYRPLETYTAVAVAYFVIL 202

Query: 375 LSLSIMIALFMNRLNA 390
             L++++ +   RL A
Sbjct: 203 FPLTVLVRIGERRLGA 218


>gi|10954336|gb|AAG24254.1| YckJ [Bacillus subtilis]
          Length = 234

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 21/209 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ G++L+L  T L+R    +  + +  +Y+S   + G P LV + + + L      
Sbjct: 40  ILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA--VRGTPLLVQLFIIFYL------ 90

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FN     T+ P F S  IA S    A+ +EI+R+ +++VP+GQ EA   +G+TH+K 
Sbjct: 91  FPAFNI----TLDP-FPSAVIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKT 145

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI- 369
              V+LPQA R  IPPL++ +++L+K++SLA  +  A+L      I  +    I +I I 
Sbjct: 146 LFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIE 205

Query: 370 -----WMFIYLSLSIMIALFMNRLNAKIA 393
                W+  +L LS++  +   RL+  +A
Sbjct: 206 AAFIYWIICFL-LSLVQHVIERRLDRYVA 233


>gi|331701132|ref|YP_004398091.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329128475|gb|AEB73028.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 489

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 21/202 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  ++G++L+L      R   +K  + L + Y  T  I G P +V +   Y         
Sbjct: 304 FGVLIGVILALM-----RFSKQKWLRGLAISY--TEFIRGTPLMVQVLFVY--------- 347

Query: 252 GQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               F  G  V+ P  +S  IA+S  + A++AEI+R G+ +V +GQ EAA +LGL+    
Sbjct: 348 ----FGIGVVVNIPALISGMIAVSLNSGAYVAEIIRGGINSVAKGQTEAAASLGLSKGDL 403

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA ++I P L +++++L+K SS+   +G  DL+     +   T + +  I + 
Sbjct: 404 MRFVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLNIVRADTYRGVMPIFVA 463

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
           M +Y  ++  +   +N    K+
Sbjct: 464 MLLYFIMTFALTRVLNHFEGKM 485


>gi|312881585|ref|ZP_07741363.1| hypothetical protein VIBC2010_10047 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370648|gb|EFP98122.1| hypothetical protein VIBC2010_10047 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 365

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|259500817|ref|ZP_05743719.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners DSM 13335]
 gi|302190732|ref|ZP_07266986.1| ABC transporter permease component [Lactobacillus iners AB-1]
 gi|309805950|ref|ZP_07699978.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|312871166|ref|ZP_07731264.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|312873326|ref|ZP_07733381.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|325912202|ref|ZP_08174599.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325913645|ref|ZP_08176007.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|329919777|ref|ZP_08276728.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
 gi|259167511|gb|EEW52006.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners DSM 13335]
 gi|308167663|gb|EFO69814.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|311091206|gb|EFQ49595.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|311093180|gb|EFQ51526.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|325475861|gb|EGC79030.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325477004|gb|EGC80154.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|328937124|gb|EGG33552.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
          Length = 535

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 4/122 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+R+ +P +T++++
Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAVRNCLPSITNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388
             +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  I     L  N+L
Sbjct: 450 VNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFSITRIFRLIENKL 509

Query: 389 NA 390
             
Sbjct: 510 EG 511



 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134
           Y   IL G + T +L+  G I    IG LVG  R              KL+ W+  VYVE
Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354

Query: 135 VFRNIPPLVVIFFLY 149
           +FR  P +V    +Y
Sbjct: 355 IFRGTPMMVQAAVIY 369


>gi|125718375|ref|YP_001035508.1| ABC transporter membrane-spanning permease, arginine/histidine
           transport, putative [Streptococcus sanguinis SK36]
 gi|125498292|gb|ABN44958.1| ABC transporter membrane-spanning permease, arginine/histidine
           transport, putative [Streptococcus sanguinis SK36]
 gi|325690799|gb|EGD32800.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
 gi|325694843|gb|EGD36748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
 gi|325696132|gb|EGD38023.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 226

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%)

Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + + P+L QF         +   T+ P  + +  + +  Y  A+IAE++RSG+ ++PR
Sbjct: 63  EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           GQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S    +   DL+ V
Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180


>gi|300173760|ref|YP_003772926.1| glutamine-binding protein/glutamine transport system permease
           [Leuconostoc gasicomitatum LMG 18811]
 gi|299888139|emb|CBL92107.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 482

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP+++ + +                       P F +  + L   
Sbjct: 328 RGLPLMVLAFFIYIGLPSVIGMKI-----------------------PAFTAGLLTLVLN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  VR G  AV RGQMEA+ +LGL++ K+ R V++PQ ++ +IP   +Q++  LK
Sbjct: 365 EGAYTAAFVRGGFAAVDRGQMEASRSLGLSYAKSMRKVVVPQGLKIMIPSFINQFIITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+  A+G  +L   G  I+++  Q   +  I   IYL
Sbjct: 425 DTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYL 463


>gi|256849332|ref|ZP_05554765.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|256714108|gb|EEU29096.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
          Length = 494

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I +FS ++GI+L +     RLS++   K    + + YI    I G P +V I   Y    
Sbjct: 301 ITIFSVLIGIILGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 352 ---------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 311 ILGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351


>gi|281422145|ref|ZP_06253144.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Prevotella copri DSM 18205]
 gi|281403796|gb|EFB34476.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Prevotella copri DSM 18205]
          Length = 522

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 21/170 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGK-ALPLLYISTFLIF--GLPTLVLIALKYQLHFD 247
           + S +LG ++++   R     HE  G   +P +    +L    G PT+V + + Y + F 
Sbjct: 329 ILSVILGTLIAIVRAR-----HECKGDWKIPNMLCQLYLTIMRGTPTMVQLLIIYYVVF- 382

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                       S    + +   IA    +AA+IAE++RSG+++V  GQMEA  +LGL++
Sbjct: 383 -----------ASADVNKILVAVIAFGLNSAAYIAEVIRSGIMSVDNGQMEAGRSLGLSY 431

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
            K  RL++LPQA ++++P + ++ + LLK +S++  +G  DL   G  II
Sbjct: 432 GKTMRLIILPQAFKNVLPAMGNELITLLKETSISGYIGLVDLTK-GSDII 480


>gi|126434727|ref|YP_001070418.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126234527|gb|ABN97927.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. JLS]
          Length = 226

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YTA+F+ E VRSG+  VP GQ EAA +LGLT  +  R++LLPQA RS+I PL S 
Sbjct: 101 LGLTVYTASFVCETVRSGVNTVPLGQAEAARSLGLTFSQNLRMILLPQAFRSVIIPLGSV 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KN+++A A+G A+   +   +I  T   + +  I+   ++ L++ + L    L  
Sbjct: 161 LIALTKNTTIASAIGVAEAALLMKEMIENTAALLVVGSIFALGFIILTLPLGLVFGWLGK 220

Query: 391 KIALKE 396
           ++A+  
Sbjct: 221 RLAVAR 226



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y   I   F  T  L     + A I+GT++   RLS   +++W+   YV V RN P  
Sbjct: 5   TEYRAQIFEAFWTTIQLTVYSAVGALILGTVLAGIRLSPVPMLSWLGTAYVNVIRNTPLT 64

Query: 143 VVIFF 147
           ++I F
Sbjct: 65  LIILF 69


>gi|298290195|ref|YP_003692134.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926706|gb|ADH87515.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 222

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 89/156 (57%), Gaps = 11/156 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + I G PTL+ I   + ++F  P LG         +SP F++  +AL     A++AEIVR
Sbjct: 64  WFIRGTPTLIQI---FIIYFGLPQLGL-------RLSP-FVAGVVALGFNGGAYVAEIVR 112

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL A+P+GQ E+A ALG+   +    ++LPQ  R I+PP+T++ + ++KN+SL   +  
Sbjct: 113 AGLSAIPKGQTESAQALGMGRWQMMTRIILPQVFRVILPPVTNEAITMVKNTSLLSTITV 172

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +L     TII  T +  E  +    IYL ++ +I+
Sbjct: 173 VELTLYSQTIIATTFRPFEFYIATALIYLVMTSLIS 208


>gi|328554131|gb|AEB24623.1| YqiY [Bacillus amyloliquefaciens TA208]
 gi|328912522|gb|AEB64118.1| high affinity arginine ABC transporter (permease) [Bacillus
           amyloliquefaciens LL3]
          Length = 219

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 37/216 (17%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V   VLGIVLSLF        +    F+    +  PL+     + FG+P L    L +Q+
Sbjct: 31  VIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQL----LGFQI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                               +F +   ALS  +AA+++EI+R+G+ A+ +GQ EAA+ALG
Sbjct: 87  D-------------------QFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA- 363
           + + K  + +LLPQA ++I P + ++ + L K S++   +G  D++        Q+G A 
Sbjct: 128 VPYGKMMKDLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRA----YQSGAAT 183

Query: 364 ---IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +E +++  FIY  L +++A     +  K+   +
Sbjct: 184 YNYLEPLIVAGFIYYVLVLILAFIGKGVERKLKAND 219


>gi|292487757|ref|YP_003530630.1| glutamine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292898986|ref|YP_003538355.1| glutamine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198834|emb|CBJ45944.1| glutamine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291553177|emb|CBA20222.1| glutamine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
 gi|312171871|emb|CBX80128.1| glutamine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 219

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 113/206 (54%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V   V G+++ L A   +R +     + + L++I   LI G P +V +   Y   F  
Sbjct: 25  ISVLGLVGGVLIGLVAG-FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   F  +    + P F +  + +   + A+IAEI R  ++++ RG  EA +ALGL+ R
Sbjct: 79  PM--AFTDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSINRGFREAGLALGLSSR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               IYL ++++++  + RL  ++ +
Sbjct: 193 AVAVIYLIITLVLSFVLRRLERRMKI 218


>gi|319777993|ref|YP_004134423.1| polar amino acid abc transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317171712|gb|ADV15249.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 324

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 11/168 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP L+ +   Y ++   P LG   F+ G+  +       +ALS    A++ EI RSG+ 
Sbjct: 168 GLPLLMQV---YLIYLGLPQLG---FVVGAVPAG-----ILALSLCYGAYMTEIFRSGIQ 216

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ RGQ EA+ ++G       R ++LPQA+  IIPP  +Q++++LK+SSL   +G  +L+
Sbjct: 217 SIDRGQWEASRSMGFGFSLTMRRIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELM 276

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  T+  +T Q +E+++    IY  LSI + L  +R+    A  + +
Sbjct: 277 FLARTLGQKTFQHMEMLISASLIYWMLSICLELIQSRIERHYARSKVR 324


>gi|313622696|gb|EFR93054.1| arginine transport system permease protein ArtQ [Listeria innocua
           FSL J1-023]
          Length = 165

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 76/113 (67%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 35  FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 94

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            L ++++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+
Sbjct: 95  ALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLT 147


>gi|302866036|ref|YP_003834673.1| polar amino acid ABC transporter inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315502595|ref|YP_004081482.1| polar amino acid abc transporter, inner membrane subunit
           [Micromonospora sp. L5]
 gi|302568895|gb|ADL45097.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315409214|gb|ADU07331.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora sp. L5]
          Length = 218

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 31/157 (19%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  +  FL+F +P       K  ++ D                  F S  IAL  YT+A
Sbjct: 66  PLTLVFAFLVFAVP-------KLDVNIDY-----------------FNSACIALIAYTSA 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FI E+VRSG+  V  GQ EAA ALG+T  +   L++LPQA+R+++PP+ S  + +LKN++
Sbjct: 102 FICEVVRSGVNTVATGQAEAARALGMTFAQVLTLIVLPQALRAMVPPMMSVLIAMLKNTT 161

Query: 340 LAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFI 373
             +A GF+ L +  G I   +++ G+   I+L W+ I
Sbjct: 162 --IAAGFSVLEA--GAIPAYMSERGEPQFIVLTWIVI 194


>gi|255659183|ref|ZP_05404592.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
 gi|260848634|gb|EEX68641.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
          Length = 214

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 80/134 (59%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+  +  +A +   AA+ AEI R+G+ +VP+GQ EAA  LG+ + +  R ++LPQ +R +
Sbjct: 82  PDIAAALLAFTLNYAAYFAEIFRAGIQSVPKGQYEAARTLGMNYTQTMRRIILPQVIRIV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ +NL+K++SL   +   DL+ V  TI+ +       ++  +F YL+++ ++  
Sbjct: 142 LPPVSNETINLVKDTSLIYILAMNDLLRVARTIVQREFDMTPFLIAGVF-YLAMTFVLTW 200

Query: 384 FMNRLNAKIALKEK 397
              +L A     +K
Sbjct: 201 MFKKLEAYYGKYDK 214


>gi|329927997|ref|ZP_08282001.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328938101|gb|EGG34498.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 482

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL ++ F+ FG+P                    F F    T+SP  ++  + LS  
Sbjct: 327 RGIPLLVLAFFIYFGIPQ------------------AFGF----TMSP-IVAAVLTLSLN 363

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EI+R G+ ++  GQ+EAA +LGL +RKA   +++PQA++ +IP   +Q +  LK
Sbjct: 364 AGAYVTEIIRGGIQSIDPGQLEAARSLGLPYRKAMMKIIIPQAIKVMIPTFINQLVITLK 423

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G  +L   G  II +T  + +I L+   +YL +  ++    +RL  K+
Sbjct: 424 DTSILSVIGLVELTQSGKIIIARTFASFDIWLVVAIMYLVVITILTKISDRLERKV 479



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           ++L G  NT  L    +  A  +G + G  ++  N+ +  I  V+V++FR IP LV+ FF
Sbjct: 278 SLLKGLGNTLLLTIVSLFFAFFLGLIFGFMKVGRNRWLRGIATVFVDIFRGIPLLVLAFF 337

Query: 148 LY 149
           +Y
Sbjct: 338 IY 339


>gi|327474724|gb|EGF20129.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|327490281|gb|EGF22069.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
 gi|328946748|gb|EGG40886.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 226

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%)

Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + + P+L QF         +   T+ P  + +  + +  Y  A+IAE++RSG+ ++PR
Sbjct: 63  EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           GQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S    +   DL+ V
Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQIVNLIKNTSTVAIISGMDLMFV 180


>gi|324991489|gb|EGC23422.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
 gi|324993849|gb|EGC25768.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324994830|gb|EGC26743.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|325687271|gb|EGD29293.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 226

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 8/118 (6%)

Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + + P+L QF         +   T+ P  + +  + +  Y  A+IAE++RSG+ ++PR
Sbjct: 63  EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYIAEVIRSGIQSIPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           GQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S    +   DL+ V
Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180


>gi|150389461|ref|YP_001319510.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
 gi|149949323|gb|ABR47851.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
          Length = 217

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 83/132 (62%), Gaps = 4/132 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+  +  +AL+  +AA+IAEI+R+G+++V +GQMEAA +LG+ H  A + +++PQA ++I
Sbjct: 85  PDLFAGIVALTFNSAAYIAEIIRAGIMSVDKGQMEAARSLGMPHSMAMKHIIIPQAFKNI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSI 379
           +P L ++++ ++K S++   +G +D++     +   T +  E +++    +  I  +LS 
Sbjct: 145 LPALGNEFIVVIKESAIVSIIGISDIMRTATIVRGNTYRPFEPLIVAAVMYFMITFTLSN 204

Query: 380 MIALFMNRLNAK 391
           ++ +   RL A 
Sbjct: 205 LMRMMERRLRAS 216


>gi|119960912|ref|YP_949421.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119947771|gb|ABM06682.1| putative amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opine family [Arthrobacter aurescens
           TC1]
          Length = 321

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 124/229 (54%), Gaps = 26/229 (11%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVL 237
           T+   A   V  FVLG +L+L   RLS         A PLL    +  +++    P LV 
Sbjct: 77  TLKLTAISGVLGFVLGFILALM--RLS---------ASPLLVSVSWTFSWIFRSTPLLVQ 125

Query: 238 IALKYQLHF--DKPVLG------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           + L Y L +  +K  LG      +F     +T+  +F +  + L+   AA+ AEI+R G+
Sbjct: 126 LLLWYNLGYLYEKISLGIPFTDVRFFEAQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGI 185

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V +GQ+EAA ALG+   K +  ++LPQAMR+I+P   ++ + L+K +S+   + +++L
Sbjct: 186 LSVDQGQLEAASALGIPAWKRSTRIVLPQAMRAILPNAFNEIIGLVKGTSIVYVLAYSEL 245

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNRLNAKIALK 395
                 I N+T Q + ++L+    Y+ ++ ++++F   + R  +K AL+
Sbjct: 246 FYTVQVIYNRTQQVLPLLLVATLWYVVITSVLSVFQYYIERHFSKGALR 294


>gi|24379047|ref|NP_721002.1| putative glutamine ABC transporter, permease component
           [Streptococcus mutans UA159]
 gi|290580934|ref|YP_003485326.1| putative glutamine ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24376943|gb|AAN58308.1|AE014901_8 putative glutamine ABC transporter, permease component
           [Streptococcus mutans UA159]
 gi|254997833|dbj|BAH88434.1| putative glutamine ABC transporter permease component
           [Streptococcus mutans NN2025]
          Length = 228

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 76/121 (62%), Gaps = 4/121 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  + A+I+E+VR+G+ AVP+GQ+EAA +LG+    A R V+LPQA ++I+P L ++
Sbjct: 101 IVLSLNSGAYISEVVRAGIEAVPKGQLEAAYSLGIKPVNAMRYVILPQAFKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS----LSIMIALFMN 386
           ++ ++K+SSL   +G  +L +   +++  T   +  +L   F YL     +S ++ L  N
Sbjct: 161 FITIIKDSSLLQTIGVMELWNGAQSVVTATYLPLTPLLFGAFYYLMVTTLMSALVKLLEN 220

Query: 387 R 387
           R
Sbjct: 221 R 221


>gi|264680312|ref|YP_003280222.1| glutamate/aspartate transporterpermease gltK [Comamonas
           testosteroni CNB-2]
 gi|299532722|ref|ZP_07046110.1| glutamate/aspartate transport systempermease protein gltK
           [Comamonas testosteroni S44]
 gi|262210828|gb|ACY34926.1| glutamate/aspartate transport systempermease protein gltK
           [Comamonas testosteroni CNB-2]
 gi|298719357|gb|EFI60326.1| glutamate/aspartate transport systempermease protein gltK
           [Comamonas testosteroni S44]
          Length = 223

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E  S  I    + AA+ +EI+R+G+ ++PRGQ+ A  ALG+T+ +  RLV+LPQ
Sbjct: 87  GKPIGAE-TSAIITFVAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  D++          G+ IE  L     Y  + 
Sbjct: 146 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEIAGKNFGRPIESYLAAAVTYFVIC 205

Query: 379 IMIALFMNRLNAKIAL 394
             ++ F+ RL+ KIA+
Sbjct: 206 FALSWFVKRLHKKIAI 221


>gi|227877868|ref|ZP_03995884.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844269|ref|ZP_05549755.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|262047651|ref|ZP_06020605.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|293380559|ref|ZP_06626618.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295691987|ref|YP_003600597.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus ST1]
 gi|312976974|ref|ZP_07788723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Lactobacillus crispatus CTV-05]
 gi|227862530|gb|EEJ70033.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613347|gb|EEU18550.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|260572051|gb|EEX28617.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|290922873|gb|EFD99816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295030093|emb|CBL49572.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus ST1]
 gi|310896302|gb|EFQ45367.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Lactobacillus crispatus CTV-05]
          Length = 494

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 22/202 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I +FS ++GI+L +     RLS++   K    + + YI    I G P +V I   Y    
Sbjct: 301 ITIFSVLIGIILGMLLALMRLSKN---KLLHWIAVCYIE--FIRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  G+ +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LG
Sbjct: 352 ---------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLG 402

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +
Sbjct: 403 LSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGV 462

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
             + I M IY  ++  +   +N
Sbjct: 463 LPLFIAMIIYFIMTFTLTRLLN 484



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 311 ILGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQILFVY 351


>gi|126464227|ref|YP_001045340.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126106038|gb|ABN78568.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 219

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 11/160 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + I G P L+ I   + ++F  P LG         +SP F +  IAL   + A++AEIVR
Sbjct: 61  WFIRGTPALIQI---FIIYFGLPQLGL-------RLSP-FTAGVIALGINSGAYVAEIVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SGL A+ RGQ E+A+ALG +  +  R ++LPQ  R I+P +T++ ++ LKN+SL   +  
Sbjct: 110 SGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITV 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            +L     T+I+ T +  +  +    IYL L+ ++    N
Sbjct: 170 VELTLYAQTLISATFRPFDFYIAVAIIYLVLTTVLTQIAN 209


>gi|255326958|ref|ZP_05368034.1| permease protein of ABC transporter for glutamate [Rothia
           mucilaginosa ATCC 25296]
 gi|255296175|gb|EET75516.1| permease protein of ABC transporter for glutamate [Rothia
           mucilaginosa ATCC 25296]
          Length = 227

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 81/162 (50%), Gaps = 23/162 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFVLG VL+L       + R     +  T +  PL  + TF I G+ T      ++QL F
Sbjct: 34  SFVLGTVLALMRISPVPSLRWVGTAYVHTVRNTPLTIMMTFAILGVWT------QFQLSF 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           F+   IALS Y +AFI E +RSG+  VP+GQ EAA A+GL 
Sbjct: 88  SHDFDTNF-----------FVYAVIALSIYHSAFICEAIRSGVNTVPKGQAEAARAIGLG 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
                RLV+ PQA+R  I PL +  + L KNS++A     A+
Sbjct: 137 FFGTARLVIFPQALRGAITPLGNTLIALTKNSTVASVASVAE 178


>gi|223042510|ref|ZP_03612559.1| L-cystine transport system permease protein TcyB [Staphylococcus
           capitis SK14]
 gi|222444173|gb|EEE50269.1| L-cystine transport system permease protein TcyB [Staphylococcus
           capitis SK14]
          Length = 239

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 95/155 (61%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG+V++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITIVTFILGLVIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLITNDADNQWTLAPVVAAI-IGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +R+  + ++LPQA+R  IP L + +L L+K++SL
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181


>gi|187933393|ref|YP_001887465.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum B str. Eklund 17B]
 gi|188589667|ref|YP_001922409.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum E3 str. Alaska E43]
 gi|251778834|ref|ZP_04821754.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|187721546|gb|ACD22767.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum B str. Eklund 17B]
 gi|188499948|gb|ACD53084.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum E3 str. Alaska E43]
 gi|243083149|gb|EES49039.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 219

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 74/111 (66%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+  +  IAL+  ++A+++EI+R+G+ AV +GQMEAA +LG+  + A   +++PQA ++I
Sbjct: 85  PDITTGAIALALNSSAYVSEIIRAGIEAVDKGQMEAARSLGMNQKTAMINIIIPQAFKNI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +P L +++++++K SS+   +G A+L+    T+   T   +E +++   +Y
Sbjct: 145 LPALGNEFISVIKESSMVSVIGVAELMYNANTVKGNTALGLEPVIVAAIVY 195


>gi|78062809|ref|YP_372717.1| glutamine ABC transporter permease protein [Burkholderia sp. 383]
 gi|77970694|gb|ABB12073.1| L-glutamine ABC transporter membrane protein [Burkholderia sp. 383]
          Length = 218

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 17/189 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V  F++G++  +F     R +  K    L  +YI   LI G P +V +     L+F  P
Sbjct: 30  LVGGFIVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L      G         +  IA++  + A++AE+VR  L+++P+G  EA +A+GL+  +
Sbjct: 80  LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI   
Sbjct: 133 VLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTA 192

Query: 370 WMFIYLSLS 378
              IYL L+
Sbjct: 193 VAVIYLLLT 201



 Score = 37.0 bits (84), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 13/107 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++AF G++   I+G + G  R    K +  + +VY+E+ R  P +V + FLY +    
Sbjct: 22  TVFIAFFGLVGGFIVGMIAGMFRAYGPKAMNVLAQVYIELIRGTPIVVQVMFLYFA---- 77

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           LP+  H         +   GL+   + +  N+  ++   V G +LS+
Sbjct: 78  LPLLAH---------IRIDGLTAAIIAITVNSGAYLAEVVRGALLSI 115


>gi|160935369|ref|ZP_02082751.1| hypothetical protein CLOBOL_00264 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441727|gb|EDP19427.1| hypothetical protein CLOBOL_00264 [Clostridium bolteae ATCC
           BAA-613]
          Length = 215

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++ +  + Y  A+IAEI+RSG+ ++P+GQ EAA  +GL      R V+LPQ+ +  +P
Sbjct: 87  FSAVVLVYTLYGGAYIAEIIRSGIESIPKGQWEAAKCIGLNPVDVLRDVVLPQSFKISLP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L   +L L+K++S+A  +G+++L+  G TI+N TG   E  ++   IY  +   ++ ++
Sbjct: 147 ALIGFHLGLIKDTSIASIIGYSELLREGKTIMNVTGYPFETYILVAVIYFIICYPLSKYV 206

Query: 386 NRLNAKIAL 394
                K  L
Sbjct: 207 GWTERKAGL 215



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 38/66 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY   +L GF+ T  L+ + +I +T++G + G      N+ +  + R+YVE+FR  P L+
Sbjct: 9   SYWRLLLDGFLITLKLSLTVIITSTLLGVICGMLFTLKNRGIRGVLRIYVELFRGCPLLM 68

Query: 144 VIFFLY 149
            +F  Y
Sbjct: 69  QLFMGY 74


>gi|116512666|ref|YP_811573.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris SK11]
 gi|116108320|gb|ABJ73460.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 228

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 78/127 (61%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + A++AEIVR+G+ AVP GQ EAA +LG+  R+A   V+LPQA+R+I+P + ++
Sbjct: 101 ILISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMTTVILPQALRNILPAVGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386
           ++ ++K+SSL   +G  ++ +   T+ N T Q I     + L +  +   +S ++ LF  
Sbjct: 161 FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMIFVALYYFVVTFVVSRLLVLFEK 220

Query: 387 RLNAKIA 393
           RL    A
Sbjct: 221 RLGKGYA 227


>gi|325275176|ref|ZP_08141143.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324099663|gb|EGB97542.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 223

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 23/204 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           VLG +L+L     S+      G      +++PLL + T+    +P      L++    D 
Sbjct: 35  VLGTILALMRLSSSKLLSRLAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV               F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG+T+ 
Sbjct: 91  PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMTYS 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G++ E ++
Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
               +Y  +S   +  + RL  +I
Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRI 221


>gi|313497435|gb|ADR58801.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 223

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           VLG +L+L     S+      G      +++PLL + T+    +P      L++    D 
Sbjct: 35  VLGTILALMRLSSSKLLSNVAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV               F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG+ + 
Sbjct: 91  PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G++ E ++
Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
               +Y  +S   +  + RL  +I
Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRI 221



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G V T  L   G+I   ++GT++   RLS++KL++ +   YV  FR+IP L+VI +
Sbjct: 14  ALWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNVAGAYVNYFRSIPLLLVITW 73

Query: 148 LYKSVLSVL 156
            Y +V  VL
Sbjct: 74  FYLAVPFVL 82


>gi|226310806|ref|YP_002770700.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093754|dbj|BAH42196.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 216

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 27/179 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL I  F  F LP       +  +  DK                 F +  +AL  +
Sbjct: 63  RNLPLLLIIFFTYFALP-------EVGIKLDK-----------------FWAAVLALVIF 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA ++EIVRSGL +V +GQ+EAA + GL + +    V+LPQA+R ++PP+ SQ+++LLK
Sbjct: 99  EAAMLSEIVRSGLTSVEKGQIEAARSSGLNYVQTLWHVVLPQALRRMVPPIVSQFISLLK 158

Query: 337 NSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++SLAV +   +L++    IIN       I   L+   +Y  ++  +++   RL  K A
Sbjct: 159 DTSLAVVIALPELMN-HAQIINGRNVNYVIPTFLMVAVMYFVVNYALSVVSKRLENKHA 216



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+ T +L GF+ T  +AF  ++ +  I  +VG  R +    V+ +    VE+ RN+P L+
Sbjct: 10  SHLTFLLEGFLVTLQVAFLSIVFSFTIAIIVGVLRYAKIPGVSQVLGTIVELIRNLPLLL 69

Query: 144 VIFFLY 149
           +IFF Y
Sbjct: 70  IIFFTY 75


>gi|46579648|ref|YP_010456.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46449063|gb|AAS95715.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
          Length = 256

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 15/178 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ VFS +  I + L  T L R    +    +   Y+   ++ G+P LV      QL + 
Sbjct: 61  QVTVFSIICSIPIGLI-TGLGRLSRNRGINLVASTYVE--VVRGIPLLV------QLFYI 111

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              LG+F  +      P+ ++  IALS    A++ E+ R+G+ A+P+GQ EAA +LG   
Sbjct: 112 YYALGRFLKV------PDMLAAIIALSVCYGAYMGEVFRAGIEAIPKGQTEAARSLGFNR 165

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +   LV+LPQA R+I+PP+ ++++ +LK++SL   +  AD++  G    +++ Q  E
Sbjct: 166 VETMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFQYFE 223



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    +I +  IG + G GRLS N+ +  +   YVEV R IP LV +F++Y +
Sbjct: 55  GILVTFQVTVFSIICSIPIGLITGLGRLSRNRGINLVASTYVEVVRGIPLLVQLFYIYYA 114

Query: 152 VLSVLPIPD 160
           +   L +PD
Sbjct: 115 LGRFLKVPD 123


>gi|313144070|ref|ZP_07806263.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129101|gb|EFR46718.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 246

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 69/114 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG+++VP+GQ EA+ + G T+ +  R ++LPQ ++ I+PPLT+Q
Sbjct: 118 LGVGAYHGAYVSEVVRSGILSVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPLTNQ 177

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            +NL+KN+S+ + V   +++ V  +    T       L    +Y  +   +A F
Sbjct: 178 MVNLIKNTSVLLIVAGGEIMYVADSYAGDTSNYAPAYLFTALLYFIVCYPLAYF 231



 Score = 43.9 bits (102), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+A   L GF  T  ++   ++ A I GT+ G    S  K++    R+YVE+F+N P ++
Sbjct: 35  SHADEFLSGFGYTLSVSCLALLIALIFGTIGGVMATSRFKILKAYTRIYVEIFQNTPLVI 94

Query: 144 VIFFLY 149
            IFFLY
Sbjct: 95  QIFFLY 100


>gi|239618043|ref|YP_002941365.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
 gi|239506874|gb|ACR80361.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
          Length = 244

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 125/254 (49%), Gaps = 28/254 (11%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVL 200
           ++ F +Y S+  V P  + S++L +      R L F  L  T+  +      S ++G ++
Sbjct: 16  LIFFSIYASLSKVYPF-NWSVILKY------RRLFFDGLMTTLRLSVTALGLSLLVGFII 68

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +LF T       E     L ++Y+  F    +P LV+I L Y              IG  
Sbjct: 69  ALFRTSRILVLEE-----LGMIYVWFFR--NMPLLVIILLIYY------------GIGSV 109

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  I+L+ +  A++ EI R+G+ AVPRG++EA  ALG+   +    ++ P+A+
Sbjct: 110 VAINRFWAGVISLALFEGAYVGEIFRAGIEAVPRGEIEAGEALGMYKYQIMGSIIFPRAL 169

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  IPPL  Q ++L+K+SSL   +   DL      +  QT  ++E  L+    YL+++ +
Sbjct: 170 RISIPPLVGQMVSLVKDSSLVSVIALGDLTMRARQVGTQTLASLEAYLVLAGFYLAITSL 229

Query: 381 IALFMNRLNAKIAL 394
           ++L    L  ++A+
Sbjct: 230 LSLVGRYLERRLAI 243


>gi|319408773|emb|CBI82430.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella schoenbuchensis R1]
          Length = 250

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 73/115 (63%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +T+A +AE VRSG+ ++  GQ  AA+A+G T  ++ R ++LP+A+R+I+PPLTS+ 
Sbjct: 120 ALGFFTSARVAEQVRSGIESISSGQRYAAMAMGFTTGQSYRYIILPRAIRTILPPLTSEA 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + ++KNSS+A AV   +L+      I +     E  LI   +Y+ +++ I + M 
Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQTIEEVSHVYENYLIVTILYIVIALFIFIMMT 234



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRN 138
           +Y   +L GF NT  L+ S +I A  +G ++G  R        N+++  I RV+VE+ RN
Sbjct: 28  TYLDTLLDGFKNTAILSVSSLILAVFVGVIIGTIRTLPHTSIINRVLRAIGRVWVEIMRN 87

Query: 139 IPPLVVIFFLYKSVLSVLP 157
           IP LV +F  Y  V  + P
Sbjct: 88  IPLLVQVFLWYFVVPKIYP 106


>gi|182435531|ref|YP_001823250.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178464047|dbj|BAG18567.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 215

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 2/127 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  YT++F+ E VRSG+  VP GQ EAA ++G+T  +  ++V+LPQA R++IPPL+S 
Sbjct: 90  LALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSI 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
           ++ L KNS++A A   A+L      +++  G  I  + IW+ I YL ++  I+     L 
Sbjct: 150 FIALTKNSAIAGAFSVAELFG-WQKLMSDKGYDIVPVFIWVAIGYLVVTFTISGLFRLLE 208

Query: 390 AKIALKE 396
            ++ +  
Sbjct: 209 RRMEVAR 215


>gi|34496729|ref|NP_900944.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472]
 gi|34102584|gb|AAQ58949.1| probable permease of ABC transporter [Chromobacterium violaceum
           ATCC 12472]
          Length = 246

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 5/158 (3%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
            ATRL    H  T    PL+       FG+  L+    K  L+  + ++  F+ +     
Sbjct: 58  LATRLFVGLHRNT----PLMVQLLLWYFGVSGLLPDEAKIWLNTPRALMLPFD-LALPWP 112

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S EF++ + AL+ Y+AAFI+  +++GL AVP+GQ  AA ALG++  +  RLV+LPQA + 
Sbjct: 113 SFEFLAAFTALTLYSAAFISGELQAGLNAVPKGQRLAARALGMSGWQVLRLVVLPQAWQL 172

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +  PL  QY  ++KN+SL +A+G A+L      +  +T
Sbjct: 173 VKRPLVGQYTAIVKNTSLTMAIGLAELSYASRQVETET 210


>gi|315655535|ref|ZP_07908434.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
 gi|315656552|ref|ZP_07909439.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315490190|gb|EFU79816.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
 gi|315492507|gb|EFU82111.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 217

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           + S  F +  IA S   AA+ AEI R G  A+P+GQ EAA  LG + ++    + LPQ  
Sbjct: 82  SASYNFWAAIIAFSVNYAAYFAEIYRGGFQAIPQGQTEAAFVLGYSQQRTFYTIKLPQMF 141

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+++P +T++ + L+K++SLA  + F ++ S+     + T      +   +F Y+  +++
Sbjct: 142 RTVLPSITNEVITLVKDTSLAQVISFLEMFSIAREYASTTASMAPFVAAGIFYYV-FNMV 200

Query: 381 IALFMNRLNAKIA 393
           +A+ MN+L  +++
Sbjct: 201 VAMTMNKLEKRVS 213


>gi|295394799|ref|ZP_06805014.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972395|gb|EFG48255.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 220

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 18/157 (11%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R +   +  T +  PL  +  F +FGLP L       +   D  +               
Sbjct: 47  RAAASVYITTVRNTPLTLVMFFCVFGLPFL-----DIRASHDSAI-------------NS 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   +AL  YT+ F+AE++RSG+  +P GQ EAA A+GL   +  R V++PQA R++IP
Sbjct: 89  FVLACVALIAYTSCFVAEVLRSGISTIPVGQAEAARAIGLNFGQTLRYVIMPQAFRTVIP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PL S  + +LKN+S+A A    +++S     I   G 
Sbjct: 149 PLGSVIIAMLKNTSIASAFNNREIISAMRNAIEMRGD 185


>gi|239818082|ref|YP_002946992.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239804659|gb|ACS21726.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 256

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 76/127 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  +AA+I+E+ R+G+ ++ RGQ +A  ++G T  +  R V+LPQA R ++PPL + 
Sbjct: 129 VALTLNSAAYISEVFRAGIQSISRGQFDAGRSIGFTPLQVMRYVVLPQAFRRMLPPLGNN 188

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++SL  A+G A+L     T+     +  E  L    +Y  +++++   + RL  
Sbjct: 189 AIALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVVYWVMTLVLTTMLRRLEH 248

Query: 391 KIALKEK 397
           ++A  ++
Sbjct: 249 RLARSDR 255


>gi|218550123|ref|YP_002383914.1| Amino acid ABC transporter permease [Escherichia fergusonii ATCC
           35469]
 gi|218357664|emb|CAQ90305.1| putative Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Escherichia fergusonii ATCC
           35469]
          Length = 506

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 14/206 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS VLG +L+L A +  R       +    +YI  +L   +P LVL+   Y L    P L
Sbjct: 34  FSIVLGFILAL-AKQSPRKLFNTPAR----IYI--WLFRSIPLLVLLIFVYNLPQAMPSL 86

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                   S ++  F +  IA+    AA+IAEI R GL+++P+GQ EAA ALG+ +    
Sbjct: 87  A-------SILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQ 139

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V++PQA+R  +P L ++Y+ ++K SSL   +   +++ VG  + +Q    +E +    
Sbjct: 140 WRVVIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVA 199

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
           F Y+ +  +    + RL   + + ++
Sbjct: 200 FYYVFIVTVFDFLLKRLEKYLDVTQR 225


>gi|166365426|ref|YP_001657699.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166087799|dbj|BAG02507.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 503

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 5/159 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + L   ++F  P  G F  IG +       +   ALS   AA++AEI+R G+ 
Sbjct: 335 GTPMLVQLFL---IYFGLP--GLFREIGLNIDLDRLPAALFALSLNVAAYLAEIMRGGIQ 389

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQ EA  +LG++  +    V+  QA R ++PPL ++++ L+K++SLA  +GF +L 
Sbjct: 390 SIDNGQWEACSSLGMSPVQTMHEVIFSQAFRRMLPPLGNEFITLIKDTSLAAVIGFEELF 449

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             G  ++  T +A EI +    +YL L+ + ++   RL 
Sbjct: 450 RQGQLMVATTYKAFEIYIAVAVVYLVLTTLSSVVFKRLE 488



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 25/41 (60%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I GTLV    +S  K +  ICR+YV+ FR  P LV +F +Y
Sbjct: 306 IGGTLVAIALISPYKWLKIICRIYVDFFRGTPMLVQLFLIY 346


>gi|90410650|ref|ZP_01218666.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium profundum 3TCK]
 gi|90328891|gb|EAS45175.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium profundum 3TCK]
          Length = 365

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 61/83 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+PRGQ EAA ALGL++ K+  L++LPQA++  IP + + 
Sbjct: 235 IGVVLFSAAYMAEVIRGGLQAIPRGQYEAADALGLSYWKSMYLIVLPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317


>gi|325526097|gb|EGD03757.1| glutamine ABC transporter permease protein [Burkholderia sp. TJI49]
          Length = 218

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 105/205 (51%), Gaps = 17/205 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V  FV+G++  +F     R +  K    L  +YI   LI G P +V +     L+F  P
Sbjct: 30  LVGGFVVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L      G         +  IA++  + A++AE+VR  L+++P+G  EA +A+GL+  +
Sbjct: 80  LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI   
Sbjct: 133 VLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSA 192

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
              IYL L+ ++ L +  +  ++ +
Sbjct: 193 VAVIYLILTGVMTLTLRLVEKRMKI 217



 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 13/107 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++AF G++   ++G + G  R    K +  + +VY+E+ R  P +V + FLY +    
Sbjct: 22  TVFIAFFGLVGGFVVGMIAGMFRAYGPKAMNVLAQVYIELIRGTPIVVQVMFLYFA---- 77

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           LP+  H         +   GL+   + +  N+  ++   V G +LS+
Sbjct: 78  LPLLAH---------IRIDGLTAAIIAITVNSGAYLAEVVRGALLSI 115


>gi|27365996|ref|NP_761524.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|27362196|gb|AAO11051.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus
           CMCP6]
          Length = 365

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|50085184|ref|YP_046694.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter
           sp. ADP1]
 gi|49531160|emb|CAG68872.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 225

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F   +   P F S+ I  + + AAF +EIVRSG+ +V RGQ+ A  ALG T+ ++ + 
Sbjct: 82  FEFQSDTYWGPLFSSV-ITFAIFEAAFFSEIVRSGIQSVSRGQVNAGYALGFTYGQSMKY 140

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWM 371
           V+LPQA R+++P L +Q + L ++ SL   +   D +    T+ N  G   +    LI  
Sbjct: 141 VVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTLANTYGPETKATFYLIVA 200

Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394
            +Y   S +++  + RL  KIA+
Sbjct: 201 VVYFCSSFLLSRLVKRLQQKIAI 223



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 32/58 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T  +    MI   +IGT +   RLS N + +   + YV+VFR IP + VIF  Y
Sbjct: 18  GFIFTLTVTVLAMIGGIVIGTPLAMMRLSNNVVASNFAKFYVDVFRGIPLIQVIFIFY 75


>gi|221369815|ref|YP_002520911.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221162867|gb|ACM03838.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 219

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 11/160 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + I G P L+ I   + ++F  P LG         +SP F +  IAL   + A++AEIVR
Sbjct: 61  WFIRGTPALIQI---FIIYFGLPQLGL-------RLSP-FTAGVIALGINSGAYVAEIVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SGL A+ RGQ E+A+ALG +  +  R ++LPQ  R I+P +T++ ++ LKN+SL   +  
Sbjct: 110 SGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITV 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            +L     T+I+ T +  +  +    IYL L+ ++    N
Sbjct: 170 VELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLTQIAN 209


>gi|156977167|ref|YP_001448073.1| ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116]
 gi|156528761|gb|ABU73846.1| hypothetical protein VIBHAR_05953 [Vibrio harveyi ATCC BAA-1116]
          Length = 306

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 80/144 (55%)

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           +P   Q  F G + +     S  + +   ++A+IAE+VR+GL +V +GQ EAA +LGL+ 
Sbjct: 157 EPNAVQSFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSVDKGQWEAADSLGLSS 216

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R V+ PQ +++I P L  Q ++L+K++S+   +   ++  VG  + N +G   EI 
Sbjct: 217 WVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIW 276

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           LI  F+Y  +   +++F   +  K
Sbjct: 277 LIVGFVYFLICFGLSMFFRYIEKK 300


>gi|77465748|ref|YP_355251.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|77390166|gb|ABA81350.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 219

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 89/160 (55%), Gaps = 11/160 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + I G P L+ I   + ++F  P LG         +SP F +  IAL   + A++AEIVR
Sbjct: 61  WFIRGTPALIQI---FIIYFGLPQLGL-------RLSP-FTAGVIALGINSGAYVAEIVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SGL A+ RGQ E+A+ALG +  +  R ++LPQ  R I+P +T++ ++ LKN+SL   +  
Sbjct: 110 SGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRIILPSITNEAISTLKNTSLLSTITV 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            +L     T+I+ T +  +  +    IYL L+ ++    N
Sbjct: 170 VELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLTQIAN 209


>gi|16263639|ref|NP_436432.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|14524350|gb|AAK65844.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 304

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%)

Query: 231 GLPTLVLIALKY-------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           G P LV +   Y       QL    P    +  +  +T+     +  + L     A+++E
Sbjct: 115 GTPVLVQLIFWYNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSE 174

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSGL++V  GQ +AA +LG+T+ K    +LLPQAM  IIPP  +Q + +LK SSL   
Sbjct: 175 IIRSGLMSVDPGQRQAAKSLGMTNGKTLWRILLPQAMPVIIPPTGNQTIGMLKTSSLVSV 234

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ADL+    TI ++  Q I ++++    YL+ + +++    R+    A   ++
Sbjct: 235 ISLADLLYSAQTIYSRNFQTIPLLIVACIWYLAATTILSAVQVRIERHFARSSQR 289


>gi|320156511|ref|YP_004188890.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O]
 gi|319931823|gb|ADV86687.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 365

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|261252932|ref|ZP_05945505.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260936323|gb|EEX92312.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 365

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   + +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 220 FLAEGSETDKLIRALVGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|325498437|gb|EGC96296.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Escherichia fergusonii ECD227]
          Length = 506

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 14/206 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS VLG +L+L A +  R       +    +YI  +L   +P LVL+   Y L    P L
Sbjct: 34  FSIVLGFILAL-AKQSPRKLFNTPAR----IYI--WLFRSIPLLVLLIFVYNLPQAMPSL 86

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                   S ++  F +  IA+    AA+IAEI R GL+++P+GQ EAA ALG+ +    
Sbjct: 87  A-------SILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQ 139

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V++PQA+R  +P L ++Y+ ++K SSL   +   +++ VG  + +Q    +E +    
Sbjct: 140 WRVVIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAAVA 199

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
           F Y+ +  +    + RL   + + ++
Sbjct: 200 FYYVFIVTVFDFLLKRLEKYLDVTQR 225


>gi|254173251|ref|ZP_04879924.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Thermococcus sp. AM4]
 gi|214032660|gb|EEB73489.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Thermococcus sp. AM4]
          Length = 229

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 114/205 (55%), Gaps = 13/205 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S  LG+++ L    L   +  KT + + ++Y  T  + G+P   L+A+ + + +  P+
Sbjct: 28  VLSIALGLLIGL-PVALMETYGGKTLRRIAMVYEGT--LRGIP---LLAIYFVIFYSMPM 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L       G  +SP F++  + L   ++A+ ++I RSG+ AV  GQ+EAA++LG++  + 
Sbjct: 82  LI------GLGLSP-FLAAVVGLGIRSSAYQSQIFRSGIQAVDEGQIEAAVSLGMSQWQI 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA+R  IP   ++Y+ +LK++S+A+A+G  +L      +++ T +      + 
Sbjct: 135 IRHIVLPQALRMSIPAWMNEYVIVLKDTSIALALGIVELTRQATYLVSVTAEPFRYYGLA 194

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
              YL++ + +  F N +  K  +K
Sbjct: 195 ALFYLAMVLPLTYFANWMGKKYGIK 219


>gi|293602701|ref|ZP_06685142.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818892|gb|EFF77932.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 260

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 76/130 (58%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   + L  Y +A +AE +R+G+ ++PRGQ +A  ALGLT  +  R ++LP+A R ++
Sbjct: 109 QFVPAVLCLGFYGSARVAEQLRAGIQSLPRGQFQAGTALGLTEGQVYRYIILPEAFRIVL 168

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTS+++  +K SS+A+ +G  +L     ++   +    E       IYL L+ M+ L 
Sbjct: 169 PPLTSEFMGTIKYSSVALTIGLLELTGQARSMQEFSFHIFEAFSAATVIYLILNGMVVLG 228

Query: 385 MNRLNAKIAL 394
           M  L   IA+
Sbjct: 229 MRLLERHIAV 238



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   IL+G   T  LA +  + + ++G+ +G  R + +++   +   YVE+FRN+P LV
Sbjct: 20  TFLETILIGVGWTLALALTAWVFSLLLGSWLGVMRTAQSRVKNVLGATYVELFRNVPLLV 79

Query: 144 VIFFLYKSVLSVLP----IPDHSIVLPFGMFL 171
            +F  Y  +  +LP    +    +  P+G F+
Sbjct: 80  QMFLWYFVLPELLPHAWGLAMKQMPQPWGQFV 111


>gi|291087041|ref|ZP_06345220.2| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. M62/1]
 gi|291076279|gb|EFE13643.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. M62/1]
          Length = 227

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 84/127 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   +AA+++E++RSG+ AV +GQMEAA +LGL HR+A   V+LPQA+++I+P L ++
Sbjct: 101 VALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLGLNHRQAMVKVILPQAIKNIMPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K++SLA      +L++V  T+      ++E ++I   IY  ++  ++  +N +  
Sbjct: 161 FVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSLEPLIIVGCIYFIVTFSLSKGINFMER 220

Query: 391 KIALKEK 397
           ++   E+
Sbjct: 221 RMRANER 227


>gi|221065075|ref|ZP_03541180.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220710098|gb|EED65466.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 223

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E  S  I    + AA+ +EI+R+G+ ++PRGQ+ A  ALG+T+ +  RLV+LPQ
Sbjct: 87  GKPIGAE-TSAIITFVAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  D++          G+ IE  L     Y  + 
Sbjct: 146 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEIAGKNFGRPIESYLAAAVTYFVIC 205

Query: 379 IMIALFMNRLNAKIAL 394
             ++ F+ RL+ KIA+
Sbjct: 206 FALSWFVKRLHKKIAI 221


>gi|56697501|ref|YP_167869.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679238|gb|AAV95904.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 238

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 16/174 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL       F LP +V   +   +  D P             +PE+++  + L  Y
Sbjct: 67  RNVPLLVQLFLWYFVLPEIVPSDMGRWMKRDMP-------------NPEYVTAVVGLGLY 113

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TA+ +AE VR+G+ AV  G   AA A GL+  +  R VLLP + R I+PP+TS++L + K
Sbjct: 114 TASRVAEQVRAGINAVGGGLTSAAYANGLSTAQTYRYVLLPISFRLIVPPMTSEFLTIFK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI---MIALFMNR 387
           NSSLA+ +G  +L +    I   T Q  E       IY+ +++   +IA  + R
Sbjct: 174 NSSLALTIGLLELTAQSQQIAEYTFQGFEAFTAATVIYVVIALCATVIAQILER 227



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y   ++ G   TF +A    + A  +G LVG GR   ++ VA +C  YVE+FRN+P 
Sbjct: 12  EEEYLGWLISGVGWTFSVALVAWVLALAVGILVGVGRTLPSRPVALLCTTYVEIFRNVPL 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  +  ++P
Sbjct: 72  LVQLFLWYFVLPEIVP 87


>gi|50123396|ref|YP_052563.1| amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613922|emb|CAG77375.1| probable amino acid ABC transporter, permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 231

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 72/119 (60%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           ++ + EF+    AL    AA+ +E +RSGL A+P GQ EA+ ALG++  ++ R V+LPQ 
Sbjct: 93  NSFNAEFLFSMFALGLCQAAYFSEDIRSGLRAIPDGQNEASRALGMSFMRSMRSVILPQG 152

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +R+ +P L +  + L KN+SLA+ +G A+L  +   + NQT +  E  LI    YL  S
Sbjct: 153 IRNALPSLINHTVLLFKNTSLAMVIGVAELTYITRDLENQTFRTFEAYLIGTLGYLIFS 211



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 37/73 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G + T  LA    + A  I  ++   RL+  ++  W+   YV   RN+P L+ 
Sbjct: 13  YADVIVEGAMITLKLAVGAWLLAMFIALILLVIRLTERRVAIWLVAAYVSYHRNVPTLIQ 72

Query: 145 IFFLYKSVLSVLP 157
           +   Y ++ ++LP
Sbjct: 73  LMMWYFAIPTLLP 85


>gi|322616304|gb|EFY13213.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619554|gb|EFY16429.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622750|gb|EFY19595.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628662|gb|EFY25449.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631599|gb|EFY28355.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637126|gb|EFY33829.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641674|gb|EFY38310.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644531|gb|EFY41071.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648465|gb|EFY44917.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654200|gb|EFY50523.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658115|gb|EFY54382.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663589|gb|EFY59791.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670325|gb|EFY66465.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671561|gb|EFY67683.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676917|gb|EFY72984.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682842|gb|EFY78861.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686521|gb|EFY82503.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323194582|gb|EFZ79775.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199087|gb|EFZ84183.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202042|gb|EFZ87101.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208932|gb|EFZ93869.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323213917|gb|EFZ98687.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215231|gb|EFZ99976.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323220849|gb|EGA05287.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323227291|gb|EGA11459.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229909|gb|EGA14032.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233134|gb|EGA17230.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240869|gb|EGA24911.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243186|gb|EGA27206.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248725|gb|EGA32653.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251729|gb|EGA35596.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257541|gb|EGA41229.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261456|gb|EGA45037.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267887|gb|EGA51366.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272046|gb|EGA55461.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 219

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%)

Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            AK+ ++  VLG+   L    A   +R F       + LL+I   +I G P +V +   Y
Sbjct: 18  GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALLFIE--IIRGTPIVVQVMFIY 75

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +A
Sbjct: 76  ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 126

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +
Sbjct: 127 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+EI       YL ++++++  + RL  ++ +
Sbjct: 187 ALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218


>gi|317047480|ref|YP_004115128.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949097|gb|ADU68572.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 219

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 14/207 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFD 247
           I V   V G+++ L A   +R +       + L++I   LI G P +V +   Y  L   
Sbjct: 25  ISVLGLVGGLIIGLVAG-FARAYGGWIANNIALVFIE--LIRGTPIVVQVMFIYFALPMA 81

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L          + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ 
Sbjct: 82  FPDL---------RIDP-FTAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSR 131

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+  R V++P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI 
Sbjct: 132 RETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIW 191

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
                IYL ++++++  + R+  ++ +
Sbjct: 192 SAVAIIYLVITLVLSFVLRRIEKRVKI 218


>gi|296139696|ref|YP_003646939.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296027830|gb|ADG78600.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 316

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 32/219 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLV 236
           LT+   A  F   FVLGI L+  A RL            PLL   +F    ++  +P LV
Sbjct: 74  LTLWLTAVTFTAGFVLGIGLA--AMRL---------WGGPLLQSVSFGFVWIVRSVPPLV 122

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL------------YIALSCYTAAFIAEI 284
           L+   +QL    P L       G    PEF++             +IAL+   AAF AEI
Sbjct: 123 LLLFWFQLASLYPQLSL-----GIPFGPEFVTFNTTHLIAPLVAAFIALTLDVAAFAAEI 177

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL++V  GQ EAA +LGL  R+  R ++LPQAM +IIP   +  + LLK++SL   +
Sbjct: 178 VRGGLVSVDPGQTEAARSLGLNPRRIFRRIVLPQAMPAIIPSSGNLLIGLLKSTSLVSVI 237

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
              DL+     I NQ  + + ++L+    Y+ ++ ++A+
Sbjct: 238 AVTDLLYSVQLIYNQNFKVMPLLLVATIWYIVITSVLAI 276


>gi|117621263|ref|YP_855305.1| glutamine transport system permease protein GlnP [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117562670|gb|ABK39618.1| glutamine transport system permease protein GlnP [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 220

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 62/97 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L+ + A+ + E+VR GL ++ RGQ EA +ALGL+  +  R VLLPQA++ +
Sbjct: 88  PAFWCAVLVLALWGASEVGEVVRGGLGSLARGQQEAGLALGLSRWQLYRHVLLPQALQRL 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            PP  + Y  ++K SSLAV +G  +++ VG  II +T
Sbjct: 148 TPPTINIYTRIIKTSSLAVLIGVVEVIKVGQQIIERT 184


>gi|89897022|ref|YP_520509.1| hypothetical protein DSY4276 [Desulfitobacterium hafniense Y51]
 gi|89336470|dbj|BAE86065.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 223

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 60/87 (68%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + +  Y  A+IAE+VR+G+ A+ RGQMEAA++ G ++  A R V+LPQA R +
Sbjct: 91  PVFSVGVLGVGVYHGAYIAEVVRAGIQAIHRGQMEAALSQGFSYWGAMRHVILPQAARVV 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +PPLT+Q ++L+KN+S+   +   DL+
Sbjct: 151 LPPLTNQAVSLIKNTSVLAMIAGGDLM 177


>gi|220914744|ref|YP_002490052.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219952495|gb|ACL62885.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 394

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 3/131 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+  + AA++AE+VR GL  +P+GQ EAA ALGL +   T  ++LPQA+R +IPPL + 
Sbjct: 264 VAVILFAAAYLAEVVRGGLQTLPKGQYEAADALGLGYWHKTAFIILPQALRLVIPPLVNT 323

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++   K++SL + +G  DL++ G   +        + E+ L+   IY +   ++A +   
Sbjct: 324 FIGFFKDTSLVLIIGLFDLLTAGKVAMADLVWQPYSTEVYLVLAAIYFAFCYVMARYSRG 383

Query: 388 LNAKIALKEKK 398
           L    +   K+
Sbjct: 384 LEQGFSRSTKR 394


>gi|126724326|ref|ZP_01740169.1| ABC-type glutamine transport system, permease component
           [Rhodobacterales bacterium HTCC2150]
 gi|126705490|gb|EBA04580.1| ABC-type glutamine transport system, permease component
           [Rhodobacterales bacterium HTCC2150]
          Length = 253

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 28/226 (12%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLLYISTFLIFGL 232
           M +  +I V +  + I+L L             R+    + +  +++PLL +  ++ +GL
Sbjct: 46  MASTIQISVIAAAISIILGLLVALPGQSSKRGWRIVSRIYVEFIRSIPLLPMLFWVFYGL 105

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+  ++   +  D                  F    I L+   +AF AEI RSG+ ++
Sbjct: 106 P-LIFKSMGLNIPIDP-----------------FWGAIITLAVSDSAFTAEIYRSGIQSI 147

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA  +GL++ +  R V+LPQA+R I+PP+ +Q++ ++K S+ A  +G  +L   
Sbjct: 148 SKGQTEAAQTVGLSYAQTMRYVILPQAIRRILPPIANQFIYIVKMSAFASVIGMQELTRR 207

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++    + +EI  + +  YL L ++I+  +  L  ++   E+K
Sbjct: 208 ANELVVTEYRPLEIYSLLIVEYLILVLIISAGVRWLERRMGSDERK 253


>gi|77456454|ref|YP_345959.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380457|gb|ABA71970.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 209

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 10/146 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL I   L   +P LV +   Y L F  P+     F G S   P F    + LS + A+ 
Sbjct: 45  LLRIYLELFRAIPVLVWL---YLLFFGLPI-----FFGLSL--PSFWCAVLVLSLWGASE 94

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E+ R  L ++PRGQ EA +++GL   +    VLLPQA++ + PP  + Y  ++K SSL
Sbjct: 95  VGEVARGALHSLPRGQREAGLSIGLNAAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSL 154

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEI 366
           AV +G  D++ VG  II +T +++ I
Sbjct: 155 AVLIGVVDVIKVGQQIIERTYESVLI 180


>gi|332180369|gb|AEE16057.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 230

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 79/128 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +FMS  I +   +AA++ EI RSG+ +V +GQ EA  +LGL++ +    +++PQA+R+++
Sbjct: 99  DFMSGVITMGMNSAAYVCEIFRSGIQSVDKGQTEAGRSLGLSYPRTLAHIIIPQAVRNVL 158

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L ++++ ++K SS+   +G ADL+    T+   T Q  E +L+   +Y  ++  ++  
Sbjct: 159 PALGNEFVVVIKESSIVSIIGIADLMYKANTVRGNTFQPFEPLLVAAVVYFLMTFPLSKL 218

Query: 385 MNRLNAKI 392
           + R+  ++
Sbjct: 219 LARIEKRM 226



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L+G  NT  L+   +   T  G L+   R+S N+ + ++   YVE  R  P L
Sbjct: 7   SRYWSFYLIGAKNTILLSLIAVALGTCFGMLLAMCRISKNRGLRFLGTAYVEFIRGTPLL 66

Query: 143 VVIFFLYKSVLSV-LPIPD 160
           V +F +Y  + ++ +  PD
Sbjct: 67  VQLFIIYYGLQAIGIRFPD 85


>gi|261404062|ref|YP_003240303.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261280525|gb|ACX62496.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 482

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL ++ F+ FG+P                    F F    T+SP  ++  + LS  
Sbjct: 327 RGIPLLVLAFFIYFGIPQ------------------AFGF----TMSP-IVAAVLTLSLN 363

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EI+R G+ ++  GQ+EAA +LGL +RKA   +++PQA++ +IP   +Q +  LK
Sbjct: 364 AGAYVTEIIRGGIQSIDPGQLEAARSLGLPYRKAMMKIIIPQAIKVMIPTFINQLVITLK 423

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G  +L   G  II +T  + +I L+   +YL +  ++    +RL  K+
Sbjct: 424 DTSILSVIGLVELTQSGKIIIARTFASFDIWLVVAIMYLVVITILTKISDRLERKV 479



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           ++L G  NT  L    +  A  +G + G  ++  N+ +  I  V+V++FR IP LV+ FF
Sbjct: 278 SLLKGLGNTLLLTIVSLFFAFFLGLIFGFMKVGRNRWLRGIATVFVDIFRGIPLLVLAFF 337

Query: 148 LY 149
           +Y
Sbjct: 338 IY 339


>gi|158424357|ref|YP_001525649.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331246|dbj|BAF88731.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 278

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 12/203 (5%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GIVL +  T + R       + + + Y+  +L  G P ++ + L + L    P LG   
Sbjct: 75  VGIVLGVI-TAIMRMSPNPVLRGVAMGYV--WLFRGTPVILQLLLWFNLALIFPRLGISG 131

Query: 256 FIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           +    TV  E M+  +A    L     A+ +E+VR+GL+AV  GQ EAA A+G+T   A 
Sbjct: 132 WWTVRTV--EVMTPVVAALLGLGINQGAYTSEVVRAGLLAVDTGQYEAAKAIGMTRLLAL 189

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL--- 368
           R ++LPQAMR IIPPL ++++ ++K +SLA  + F +++     I     + IE+++   
Sbjct: 190 RRIVLPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSRVIELLIVAA 249

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           IW    +SL   + + + R  A+
Sbjct: 250 IWYLAIVSLLTPLQMLLERRFAR 272


>gi|258654116|ref|YP_003203272.1| polar amino acid ABC transporter inner membrane subunit
           [Nakamurella multipartita DSM 44233]
 gi|258557341|gb|ACV80283.1| polar amino acid ABC transporter, inner membrane subunit
           [Nakamurella multipartita DSM 44233]
          Length = 307

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 93/162 (57%), Gaps = 12/162 (7%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P ++L+   +QL F   +LG        T SP F ++ I L  Y  + +AE+ R+G++A
Sbjct: 116 IPVIILMLFAFQLWF--AILG--------TSSP-FAAVVIGLVLYNGSVLAEVFRAGILA 164

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLV 350
           VP+GQ EAA ALGL   +   L+LLPQA+ S++P + SQ + ++K+++L  + VG+ +L 
Sbjct: 165 VPKGQSEAAYALGLRKTQVMTLILLPQAVTSMLPAVVSQLVVIVKDTALGGILVGYVELR 224

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               T  +  G  +   ++   IY+ +++ +  F + L  K+
Sbjct: 225 RAANTSASNYGNLLPTYVVVALIYILINLALGWFSHWLERKL 266



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 22/165 (13%)

Query: 14  SRMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
            R   LYD+     R  N+ + ++  ++L  +  W ++ +   +EK+ L+      +E+ 
Sbjct: 3   ERATVLYDIPGPKARRLNLILSVVFGIVLAALVWWIISVL---IEKNQLT------AEKW 53

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
                    P+    ++ T +L G   T   A   ++ A  IG + G  R+S +  V W+
Sbjct: 54  S--------PFLEIQNWTTYLLPGLWATLQAAALSVVIALPIGAIFGIARMSDHTWVRWV 105

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
             V VE FR+IP ++++ F ++   ++L        +  G+ L N
Sbjct: 106 AGVVVEFFRSIPVIILMLFAFQLWFAILGTSSPFAAVVIGLVLYN 150


>gi|13473305|ref|NP_104872.1| amino acid ABC transporter (permease) [Mesorhizobium loti
           MAFF303099]
 gi|14024053|dbj|BAB50658.1| amino acid ABC transporter (permease) [Mesorhizobium loti
           MAFF303099]
          Length = 226

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 109/203 (53%), Gaps = 20/203 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKP 249
           SFVLG+ + L A  L R F  K     PL+ +  F ++   G P LV + L   + +  P
Sbjct: 30  SFVLGLTVGLGAA-LGRLFGPK-----PLVMLVRFYVWIFRGTPLLVQLFL---IFYGLP 80

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G+T  +
Sbjct: 81  SVG--------ILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEAAYSIGMTWSQ 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R  +LPQA R  +PPL++ +++L+K++SLA A+   ++      I+  T + + + + 
Sbjct: 133 AMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVATTYEPLILYVE 192

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              +YL++S +++    RL  ++
Sbjct: 193 AAILYLAMSSVLSALQTRLEERL 215


>gi|224437619|ref|ZP_03658572.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter cinaedi CCUG 18818]
          Length = 252

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 69/114 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG+++VP+GQ EA+ + G T+ +  R ++LPQ ++ I+PPLT+Q
Sbjct: 124 LGVGAYHGAYVSEVVRSGILSVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPLTNQ 183

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            +NL+KN+S+ + V   +++ V  +    T       L    +Y  +   +A F
Sbjct: 184 MVNLIKNTSVLLIVAGGEIMYVADSYAGDTSNYAPAYLFTALLYFIVCYPLAYF 237



 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+A   L GF  T  ++   ++ A I GT+ G    S  K++    R+YVE+F+N P ++
Sbjct: 41  SHADEFLSGFGYTLSVSCLALLIALIFGTIGGVMATSRFKILKAYTRIYVEIFQNTPLVI 100

Query: 144 VIFFLY 149
            IFFLY
Sbjct: 101 QIFFLY 106


>gi|222082848|ref|YP_002542213.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727527|gb|ACM30616.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 231

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 26/218 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKP 249
           V S   G++L  F   L R    +  K L  +YI  +L  G P LV LIAL   L    P
Sbjct: 30  VVSLTAGLILG-FVLALMRRSPFRLAKTLAKIYI--WLFRGTPLLVQLIALYTAL----P 82

Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             G +F  I  +          I L+   AA++AEI+R+G+ AVP GQ  AA ALG+T R
Sbjct: 83  QFGIRFTVIEAA---------LIGLALNEAAYLAEIIRAGIEAVPEGQARAARALGMTER 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R +++PQA + IIPPL +    LLK +S+   +   +L+     +I +    +E+  
Sbjct: 134 QIMRHIVMPQAFKVIIPPLGNSVNGLLKTTSVTSVISMEELLRRTQVLIQEHFMVLELFA 193

Query: 369 IWMFIYLSLSIMIALFMNRL--------NAKIALKEKK 398
           +    YL L+ +     N +        N+++++ EK+
Sbjct: 194 VAAIYYLLLTTLWDFVQNHIEKRFGQATNSRLSVTEKR 231


>gi|254933324|ref|ZP_05266683.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|293584885|gb|EFF96917.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
          Length = 238

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 24/211 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +       L  +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL+ 
Sbjct: 83  LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGKGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y+SLSI+  L    L       EK+
Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222


>gi|83747886|ref|ZP_00944918.1| Hypothetical Protein RRSL_03142 [Ralstonia solanacearum UW551]
 gi|207739276|ref|YP_002257669.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725419|gb|EAP72565.1| Hypothetical Protein RRSL_03142 [Ralstonia solanacearum UW551]
 gi|206592649|emb|CAQ59555.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 233

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 14/151 (9%)

Query: 245 HFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEIVRSGLI 290
           H + P L Q  F + G ST+ P            E +   +AL    AA+ +E +RSGL 
Sbjct: 66  HCNVPTLVQLMFWYFGISTLFPLPMLDWLADHHSEAVFSIVALGLCQAAYFSEDLRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA ALG +     R VL+PQA+R+ +P L +  ++L KNSSLA+A+G  +L 
Sbjct: 126 AIPPGQEEAARALGNSFIGTLRYVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVTELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                I N + +A E  L+   +YL  S++I
Sbjct: 186 HAVKEIENTSFRAFESYLLATVMYLGFSLVI 216


>gi|319950338|ref|ZP_08024257.1| glutamine ABC transporter membrane protein [Dietzia cinnamea P4]
 gi|319436030|gb|EFV91231.1| glutamine ABC transporter membrane protein [Dietzia cinnamea P4]
          Length = 220

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 73/126 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ Y AA+I E +RSG+  VP GQ EAA ++GL   ++ R V+LPQA R  I PL S 
Sbjct: 95  IMLAVYHAAYICEALRSGVNTVPVGQAEAARSIGLGFGQSLREVILPQAFRGAIAPLGSV 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+KNS++A  +G  D   +   I    G ++     +  +++ L++ I L+   L+ 
Sbjct: 155 IIALIKNSTVAAVIGVGDSAGLLQVITENEGASLPTFFFFAMVFVILTLPIGLWTTSLSR 214

Query: 391 KIALKE 396
           K+A+K 
Sbjct: 215 KLAVKR 220


>gi|308174187|ref|YP_003920892.1| high affinity arginine ABC transporter permease [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607051|emb|CBI43422.1| high affinity arginine ABC transporter (permease) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 219

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 29/212 (13%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V   VLGIVLSLF        +    F+    +  PL+     + FG+P L    L +Q+
Sbjct: 31  VIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQL----LGFQI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                               +F +   ALS  +AA+++EI+R+G+ A+ +GQ EAA+ALG
Sbjct: 87  D-------------------QFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + + K  + +LLPQA ++I P + ++ + L K S++   +G  D++         T   +
Sbjct: 128 VPYGKMMKHLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIMRRAYQSGAATYNYL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E +++  FIY  L +++A     +  K+   +
Sbjct: 188 EPLIVAGFIYYVLVLILAFIGKGVERKLKAND 219


>gi|170016705|ref|YP_001727624.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803562|gb|ACA82180.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 479

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP +  + +                       P F +  I L   
Sbjct: 326 RGLPLMVLAFFIYIGLPGVTGVKI-----------------------PAFTAGIITLILN 362

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    VR G  AV RGQMEAA +LGL +  A R V++PQ +R ++P   +Q++  LK
Sbjct: 363 EGAYTGAFVRGGFEAVERGQMEAARSLGLNYNSAMRKVIMPQGLRIMVPSFINQFIITLK 422

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +  Q   +  I   IYL +  ++    N +  KI
Sbjct: 423 DTSILSAIGLLELTQTGTLIVARNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKKI 478


>gi|49475802|ref|YP_033843.1| amino acid permease [Bartonella henselae str. Houston-1]
 gi|49238609|emb|CAF27850.1| Amino acid permease [Bartonella henselae str. Houston-1]
          Length = 250

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/103 (42%), Positives = 65/103 (63%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +T+A IAE VRSG+ A+  GQ  AA+A+G T  +  R ++LP+AMR+I+PPLTS+ 
Sbjct: 120 ALGFFTSARIAEQVRSGIEAISSGQRYAAMAMGFTTYQIYRYIILPRAMRTIMPPLTSEA 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + ++KNSS+A AV   +L+      I +     E  LI   +Y
Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQTIEEMSHVYENYLIVTILY 222



 Score = 40.0 bits (92), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA-----WICRVYVEVFRN 138
           +Y   +L    NTF L+ S +I A  +G +VG  R   N  +       I  ++VEV RN
Sbjct: 28  TYLDTLLESLKNTFVLSISSLILAIFLGVIVGTMRTLPNTSMTNCSFRTIGYIWVEVMRN 87

Query: 139 IPPLVVIFFLYKSVLSVLP 157
           IP LV +F  Y  V  + P
Sbjct: 88  IPLLVQVFLWYFVVPKIYP 106


>gi|47097702|ref|ZP_00235210.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 1/2a F6854]
 gi|47013921|gb|EAL04946.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 1/2a F6854]
          Length = 136

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 67/91 (73%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P
Sbjct: 6   FVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILP 65

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 66  ALGNEFVTVIKESSIVSVIGVTELMFMTGVV 96


>gi|325525581|gb|EGD03370.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 500

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 10/188 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K+ V +++LG++L  F   L+R  H    K +  +YI  F    LP LVL+   Y L   
Sbjct: 26  KLSVSAWLLGVLLG-FPVALARQSHHAALKRVAAVYIWFFR--SLPLLVLLVFIYNL--- 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                Q      + +S  F +  IA+     A+ AEI R G+++VPRGQ+EA  ALG+  
Sbjct: 80  ----PQVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRF 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R++++PQA+R  +P L ++++ ++K +SL   +  A+++ VG  +  Q     E +
Sbjct: 136 TGIQRMIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETM 195

Query: 368 LIWMFIYL 375
           L   F Y+
Sbjct: 196 LAVAFYYV 203


>gi|327193818|gb|EGE60695.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CNPAF512]
          Length = 252

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 90/157 (57%), Gaps = 11/157 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P+L       G+ V P F+++   L  Y +AF++E+VR+G++
Sbjct: 74  GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+AA ALG ++  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL 
Sbjct: 124 ALGPGQMDAARALGHSYMGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMN 386
                + NQ   Q  ++ LI   +Y ++   +  F N
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220


>gi|46908518|ref|YP_014907.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b F2365]
 gi|47092446|ref|ZP_00230236.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|254825077|ref|ZP_05230078.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254994370|ref|ZP_05276560.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J2-064]
 gi|300763904|ref|ZP_07073900.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|46881790|gb|AAT05084.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019223|gb|EAL09966.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|293594320|gb|EFG02081.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300515245|gb|EFK42296.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|328465383|gb|EGF36630.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 1816]
 gi|328471567|gb|EGF42447.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 220]
          Length = 238

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 24/211 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +       L  +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL+ 
Sbjct: 83  LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y+SLSI+  L    L       EK+
Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222


>gi|319950980|ref|ZP_08024851.1| putative ABC transporter permease [Dietzia cinnamea P4]
 gi|319435362|gb|EFV90611.1| putative ABC transporter permease [Dietzia cinnamea P4]
          Length = 327

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 80/130 (61%), Gaps = 4/130 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   AA++AEIVR+G+ +VP GQ EA+ ALG+T  +  R  +LPQAMR IIPP  ++
Sbjct: 165 VGLAMNEAAYMAEIVRAGISSVPEGQAEASTALGMTWGQTMRRTILPQAMRVIIPPTGNE 224

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMN 386
           ++++LK +SL VA+ F+ +L      I     Q I ++L+   W  +  S+ ++   F+ 
Sbjct: 225 FISMLKTTSLVVAIPFSGELYGQARDISGVNFQPIPLLLVAATWYLVITSVLMVGQHFLE 284

Query: 387 RLNAKIALKE 396
           +  ++ A ++
Sbjct: 285 KRFSRGATRQ 294


>gi|326776168|ref|ZP_08235433.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326656501|gb|EGE41347.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 215

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 2/127 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  YT++F+ E VRSG+  VP GQ EAA ++G+T  +  ++V+LPQA R++IPPL+S 
Sbjct: 90  LALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSI 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
           ++ L KNS++A A   A+L      +++  G  I  + IW+ I YL ++  I+     L 
Sbjct: 150 FIALTKNSAIAGAFSVAELFG-WQKLMSDKGYDIVPVFIWVAIGYLVVTFTISGLFRLLE 208

Query: 390 AKIALKE 396
            ++ +  
Sbjct: 209 RRMEVAR 215


>gi|238920805|ref|YP_002934320.1| glutamate-aspartate transport system permease [Edwardsiella
           ictaluri 93-146]
 gi|238870374|gb|ACR70085.1| glutamate-aspartate transport system permease [Edwardsiella
           ictaluri 93-146]
          Length = 225

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 114/207 (55%), Gaps = 12/207 (5%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           KI + + V+GI+    L   RLSR    K    L  LY++ F    +P LV++ L + L 
Sbjct: 25  KITLTAVVVGILWGTLLAVMRLSRW---KPLAWLAALYVNLFR--SVP-LVMVLLWFYLV 78

Query: 246 FDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              P L Q  F+G S  S    +S  +A + + AA+ +EI+R+G+ +V RGQ  AA+ALG
Sbjct: 79  V--PSLLQ-RFLGLSPQSDIRLISAMVAFALFEAAYYSEIIRAGIKSVARGQNAAALALG 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  ++  LV+LPQA R+++P L +Q + L +++SL   +  AD      TI  + G  +
Sbjct: 136 MTPWQSMYLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQL 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E+IL    +Y  +S+  +L +  L  +
Sbjct: 196 EMILFAGAVYFIISLSASLLVGHLKKR 222



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 41/68 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GTL+   RLS  K +AW+  +YV +FR++P ++V+ + 
Sbjct: 16  LLDGLVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVL 156
           Y  V S+L
Sbjct: 76  YLVVPSLL 83


>gi|257057820|ref|YP_003135652.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256587692|gb|ACU98825.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 269

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 24/214 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDK 248
           F    V+G+VL+L        +     + L  LYI  F   G+P L V IAL Y +    
Sbjct: 69  FGLGLVIGMVLALMKLSSVGPY-----RWLATLYIEFFR--GIPALLVFIALGYGV---- 117

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+     F   ST +       IAL    +A+IAE +R+G+ AVP+GQ+EAA +LG++  
Sbjct: 118 PLAFGIRFDIYSTAA-------IALGLVGSAYIAETLRAGIQAVPKGQVEAARSLGMSQA 170

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAI 364
           + T  V++PQA R I+PPLT++ + L K+SSL   +G A    +L   G   +N TG   
Sbjct: 171 RTTVTVVIPQAFRIILPPLTNELILLTKDSSLIYLLGLAREEYELAKFGREGLNATGSLT 230

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            I+L  +  YL +++ +      L  +   KE++
Sbjct: 231 PILLAGV-CYLIITVPLGYLSRYLERRSGRKEER 263


>gi|254473626|ref|ZP_05087022.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211957338|gb|EEA92542.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 274

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   +AFIAEI R+G+ +V  GQ+EA  ALGL+     R ++ PQA ++I+PPL + 
Sbjct: 145 IALSLGYSAFIAEIFRAGIESVDEGQLEAGRALGLSRWHTFRFIIWPQAFKNILPPLGND 204

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K S+L   +G  D+  +G      T Q  E   +  ++YL +++ ++L +  L  
Sbjct: 205 FIALIKESALVSVLGVQDITQLGKIYSASTFQFFETYNVVAYLYLIMTVSLSLVVRGLER 264

Query: 391 KI 392
           ++
Sbjct: 265 RM 266



 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 15/53 (28%), Positives = 30/53 (56%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           T ++ F     A+  G  +  GR S ++++  +C  Y E+ R +P LV++F++
Sbjct: 52  TLFVTFVSFFIASFFGLFIAIGRGSKHRIIREMCSFYTEIMRGVPMLVLLFYI 104


>gi|167842072|ref|ZP_02468756.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia thailandensis MSMB43]
          Length = 297

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 16/228 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           G FL  R +    LT   N  +  V +  LGIVL +  T + R        A+   YI  
Sbjct: 66  GQFLTARSI----LTGLGNTIVMTVLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYI-- 118

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +L  G P ++ + L + L    P LG     +F  +    V   F++  + L     A+ 
Sbjct: 119 WLFRGTPVILQLLLWFNLALVFPTLGIPGIAEFRTV---DVMTPFLAAVLGLGINQGAYT 175

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+VR+GL++V  GQ EAA ++G+   +A R ++LPQAMR I+PP+ ++ + ++K +SLA
Sbjct: 176 SEVVRAGLLSVDTGQYEAAKSIGMARLQALRRIILPQAMRMIVPPIGNELIGMVKLTSLA 235

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             V +A+++     I     + IE++++    YL++  +++    R+ 
Sbjct: 236 SVVQYAEMLHNAQNIYYANARVIELLIVAGIWYLAVVTVLSFAQARVE 283


>gi|148980392|ref|ZP_01816035.1| ABC-type amino acid transport system, permease component
           [Vibrionales bacterium SWAT-3]
 gi|145961264|gb|EDK26576.1| ABC-type amino acid transport system, permease component
           [Vibrionales bacterium SWAT-3]
          Length = 366

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 65/95 (68%), Gaps = 1/95 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS     F +L + +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++LPQ
Sbjct: 225 GSETDKLFRAL-VGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMGLIILPQ 283

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           A++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 284 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 318


>gi|150019589|ref|YP_001311843.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149906054|gb|ABR36887.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 219

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 19/190 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDK 248
           F+ + G +L L  T L R       K  P+ YI+      + G P LV I   Y ++   
Sbjct: 26  FAVLCGTILGLALTLLRRS------KFKPISYIAAAYVEFVRGTPLLVQI---YIIYIGL 76

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L   +        P+     IAL+  +AA+I+EI+R+G+ AV +GQMEAA +LG+   
Sbjct: 77  PKLIGIDM-------PDMTVGSIALALNSAAYISEIIRAGIEAVDKGQMEAARSLGMNQG 129

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A   V++PQA ++I+P L +++++++K SS+   +G A+L+     +   T   +E I+
Sbjct: 130 LAMVHVIIPQAFKNILPALGNEFISVIKESSMVSVIGVAELMYNASIVRGNTALGLEPII 189

Query: 369 IWMFIYLSLS 378
           +   +Y  L+
Sbjct: 190 VAAVVYFVLT 199


>gi|306831123|ref|ZP_07464284.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304426689|gb|EFM29800.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 522

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 93/171 (54%), Gaps = 14/171 (8%)

Query: 191 VFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V S +L +VL  F  A R+S +        L  LYI   ++ GLP LV+++L     +  
Sbjct: 30  VVSMILALVLGGFVTAARMSDNL---LISGLTKLYIE--VVRGLPMLVILSL---FFYGL 81

Query: 249 PVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG FN   GS    +    +S  I L+   + F+AEI RSG+ AV  GQ E A ++G 
Sbjct: 82  PELG-FNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGARSIGF 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
              +  R V++PQA ++I+P L +++ N +K+SS A  +G ADL+    TI
Sbjct: 141 NKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTI 191



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 4/91 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y + IL G + T +L+   MI A ++G  V A R+S N L++ + ++Y+EV R +P L
Sbjct: 12  QNYGSFILDGALMTVFLSVVSMILALVLGGFVTAARMSDNLLISGLTKLYIEVVRGLPML 71

Query: 143 VVI-FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V++  F Y        +PD S+   FG+ L+
Sbjct: 72  VILSLFFYGLPELGFNVPDGSL---FGVDLD 99


>gi|206577706|ref|YP_002238970.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|290512972|ref|ZP_06552336.1| octopine/nopaline transport system permease [Klebsiella sp. 1_1_55]
 gi|206566764|gb|ACI08540.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|289774585|gb|EFD82589.1| octopine/nopaline transport system permease [Klebsiella sp. 1_1_55]
          Length = 243

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 23/212 (10%)

Query: 189 IFVFSFVLG--IVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245
           +F+ SF+LG  + L + A R+S H+   +G A         LIF G P L+ + L Y   
Sbjct: 25  LFICSFILGGALALGVLALRMS-HWPLASGFA-----KGYILIFRGSPLLIQLFLIYY-- 76

Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                LGQF  I  S + P     F+   +AL+  TAA+ AEI+R GL+A+P GQ+EA  
Sbjct: 77  ----GLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEAGQ 132

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T 
Sbjct: 133 ACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTY 192

Query: 362 QAIEIILIWMFIYLSLSIMI----ALFMNRLN 389
           + +E+ L    IYL L+ +I    AL   RL 
Sbjct: 193 RTMEVFLCAAAIYLLLNFIIVQLYALLERRLT 224


>gi|120602869|ref|YP_967269.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120563098|gb|ABM28842.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311233446|gb|ADP86300.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 262

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 97/178 (54%), Gaps = 15/178 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ VFS +  I + L  T L R    +    +   Y+   ++ G+P LV      QL + 
Sbjct: 67  QVTVFSIICSIPIGLI-TGLGRLSRNRGINLVASTYVE--VVRGIPLLV------QLFYI 117

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              LG+F  +      P+ ++  IALS    A++ E+ R+G+ A+P+GQ EAA +LG   
Sbjct: 118 YYALGRFLKV------PDMLAAIIALSVCYGAYMGEVFRAGIEAIPKGQTEAARSLGFNR 171

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +   LV+LPQA R+I+PP+ ++++ +LK++SL   +  AD++  G    +++ Q  E
Sbjct: 172 VETMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADILRRGREFASESFQYFE 229



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    +I +  IG + G GRLS N+ +  +   YVEV R IP LV +F++Y +
Sbjct: 61  GILVTFQVTVFSIICSIPIGLITGLGRLSRNRGINLVASTYVEVVRGIPLLVQLFYIYYA 120

Query: 152 VLSVLPIPD 160
           +   L +PD
Sbjct: 121 LGRFLKVPD 129


>gi|300716002|ref|YP_003740805.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299061838|emb|CAX58954.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 247

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 17/199 (8%)

Query: 189 IFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +F  SFVLG +L+L   A R+SR+           LYI  F   G P ++ + L Y    
Sbjct: 24  LFFASFVLGGLLALVILAMRMSRN---PLLSGFARLYILVFR--GSPLMIQLFLIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
               LGQF  I  S V P     F    +AL+  TA++ AEI R GL+A+P GQ+EA +A
Sbjct: 76  ---GLGQFEVIRHSFVWPVLREPFFCAVVALALCTASYTAEIFRGGLLAIPSGQIEAGMA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T +
Sbjct: 133 CGMSRWLLLRRIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYR 192

Query: 363 AIEIILIWMFIYLSLSIMI 381
            +E+ +    IYL L+ +I
Sbjct: 193 TMEVFVCAALIYLILNFII 211


>gi|118473444|ref|YP_889564.1| glutamine ABC transporter permease/substrate-binding protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118174731|gb|ABK75627.1| glutamine ABC transporter, permease/substrate-binding protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 468

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 33/208 (15%)

Query: 193 SFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + VLG++  L   R+SR          +    +  PLL  + F+ FG+P+    AL +Q+
Sbjct: 284 ALVLGVIFGLL--RVSRSVVLRAIGTTYVDIFRGTPLLVQAFFIYFGIPS----ALGFQM 337

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  I LS    A++ EIVR G+ +V +GQMEAA +LG
Sbjct: 338 S-------------------ALTAGIITLSLNAGAYMTEIVRGGIQSVDKGQMEAARSLG 378

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +    R V+LPQA+R++IP   +Q++  LK++S+   +G A+L   G  II +  Q+ 
Sbjct: 379 IGYLPTMRKVILPQAIRTMIPSYINQFVITLKDTSILSVIGIAELTQTGRIIIARNFQSF 438

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + LI   IY  + + +    +R+  ++
Sbjct: 439 TMWLIIGIIYFVVIMALTKLSDRVEKRL 466


>gi|71083758|ref|YP_266478.1| ABC transporter permease component [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062871|gb|AAZ21874.1| ABC transporter permease component [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 226

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 23/150 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+PLL +  ++ +GLP +                       G + SP F+S  IAL+  
Sbjct: 68  RAIPLLVLILWIYYGLPIMT----------------------GLSFSP-FVSGIIALAIS 104

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF AEI R+G+ ++ + Q EA  +LGLT  K  RLV+LPQA+++I+P L +Q++ +LK
Sbjct: 105 ESAFQAEIFRAGINSIKKSQWEAGSSLGLTFYKRLRLVILPQAIKNILPALGNQFVYVLK 164

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            SSL   +G  DL      ++  T + +EI
Sbjct: 165 MSSLVSIIGIGDLTRKANELVVSTYRPLEI 194


>gi|332161362|ref|YP_004297939.1| putative amino-acid ABC transporter [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665592|gb|ADZ42236.1| putative amino-acid ABC transporter [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859509|emb|CBX69852.1| inner membrane amino-acid ABC transporter permease protein yecS
           [Yersinia enterocolitica W22703]
          Length = 220

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F   LG +L++   RLSR         LPL  +S F +       LIA  + +++  P  
Sbjct: 32  FGLALGFMLAMM--RLSRF--------LPLSLLSRFYVSIFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +L I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDPMPAAL-IGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V+LPQA RS +PPL + ++ L+K++SLA  +   +L      + ++T +   + L   
Sbjct: 134 YRVILPQAGRSALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLVTSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   NRL A +  ++++
Sbjct: 194 LIYWIMATLLSALQNRLEAHVNRQDQE 220


>gi|300717206|ref|YP_003742009.1| L-cystine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299063042|emb|CAX60162.1| L-cystine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 222

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L++   RLS HF   +   L   Y+S F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILAMM--RLS-HFWPISW--LSRCYVSIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ +E +R  + ++ RGQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYASESLRGAIASIERGQWEAASSIGMTRWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA R+ +PPL + +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRVILPQAARTALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ ++++  ++L  ++  ++++
Sbjct: 194 LIYWVMATVLSILQSKLEDRVNRQDRE 220



 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   RLS    ++W+ R YV +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFILAMMRLSHFWPISWLSRCYVSIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNN 173
           Y  +    + + PIP   I    G+ LN 
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNT 99


>gi|261343547|ref|ZP_05971192.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
 gi|282568696|gb|EFB74231.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 226

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 73/127 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A   + AA+ +EI+R+G+ ++ RGQ  A++ALG+T  +  RL++LPQA ++++
Sbjct: 97  RLISAVVAFCLFEAAYYSEIIRAGIQSISRGQANASLALGMTQMQTMRLIVLPQAFKAMV 156

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   +G  D       I  + G  +E+IL    IY   S   ++ 
Sbjct: 157 PLLLTQGIVLFQDTSLVYVLGLTDFFRTATNIGERDGTQVEMILFAGLIYFIFSFGASML 216

Query: 385 MNRLNAK 391
           +N L  +
Sbjct: 217 VNYLKKR 223



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF+ T  +  + ++   + GT +   RLS  KL+ W    YV +FR++P ++V+F+ Y
Sbjct: 20  GFIITAKITAAAIVVGIVWGTALAMMRLSNIKLLRWFAAFYVNMFRSVPLVMVLFWFY 77


>gi|108799121|ref|YP_639318.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119868236|ref|YP_938188.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108769540|gb|ABG08262.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. MCS]
 gi|119694325|gb|ABL91398.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. KMS]
          Length = 226

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YTA+F+ E VRSG+  VP GQ EAA +LGLT  +  R++LLPQA RS++ PL S 
Sbjct: 101 LGLTVYTASFVCETVRSGVNTVPLGQAEAARSLGLTFSQNLRMILLPQAFRSVVIPLGSV 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KN+++A A+G A+   +   +I  T   + +  I+   ++ L++ + L    L  
Sbjct: 161 LIALTKNTTIASAIGVAEAALLMKEMIENTAALLVVGSIFALGFIILTLPLGLVFGWLGK 220

Query: 391 KIALKE 396
           ++A+  
Sbjct: 221 RLAVAR 226



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y   I   F  T  L     + A I+GT++   RLS   +++W+   YV V RN P  
Sbjct: 5   TEYRAQIFEAFWTTIQLTVYSAVGALILGTVLAGMRLSPVPMLSWLGTAYVNVIRNTPLT 64

Query: 143 VVIFF 147
           ++I F
Sbjct: 65  LIILF 69


>gi|329666485|gb|AEB92433.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 537

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 75/120 (62%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+ A P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++
Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFI 450

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG T+ +QT +  +   I   IYL L+  I    N +  K+
Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILTFSITRIFNFIEKKL 510



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134
           Y + IL G   T  LA  G I    IG LVG           G+    K+V W+  VY+E
Sbjct: 296 YGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYIE 355

Query: 135 VFRNIPPLVVIFFLY 149
           VFR  P +V    +Y
Sbjct: 356 VFRGTPMMVQAAVIY 370


>gi|319796472|ref|YP_004158112.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315598935|gb|ADU40001.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 256

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 76/127 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  +AA+I+E+ R+G+ ++ RGQ +A  ++G +  +  R V+LPQA R ++PPL + 
Sbjct: 129 VALTLNSAAYISEVFRAGIQSISRGQFDAGRSIGFSPAQVMRYVVLPQAFRRMLPPLGNN 188

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++SL  A+G A+L     T+     +  E  L    IY  +++++   + RL  
Sbjct: 189 AIALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVIYWVMTLVLTTMLRRLEH 248

Query: 391 KIALKEK 397
           ++A  ++
Sbjct: 249 RLARSDR 255


>gi|282897628|ref|ZP_06305628.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9]
 gi|281197551|gb|EFA72447.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9]
          Length = 343

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 23/192 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SF LG++L+L      R+      +   +LYI   L+ GLP   LI + +      P+
Sbjct: 156 VLSFPLGVLLAL-----GRNSELPVIRWFSILYIE--LVRGLP---LIGILFIAQVMLPL 205

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+  +      +     L  ++AA++AE VR GL ++PRGQ EAA ALGL     
Sbjct: 206 -----FLPDNWRLDRLVRGVAGLVLFSAAYMAENVRGGLQSIPRGQFEAARALGLNTFLL 260

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI- 366
             LV+LPQA+R++IP +  Q++ L K++SL   VG  +L  +  +I+ Q    G+ +E+ 
Sbjct: 261 LILVILPQALRAVIPTIVGQFIGLFKDTSLLSLVGLVELTGIARSILAQPQFLGRYMEVY 320

Query: 367 ----ILIWMFIY 374
               ++ W+F Y
Sbjct: 321 IFIGVIYWVFCY 332


>gi|329906187|ref|ZP_08274378.1| Glutamate Aspartate transport system permease protein gltK
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327547320|gb|EGF32156.1| Glutamate Aspartate transport system permease protein gltK
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 230

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 111/228 (48%), Gaps = 12/228 (5%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP---- 233
           F     +   + +V+ F  G+V +L  T ++       G  L ++ +S +    LP    
Sbjct: 2   FANFDFNVIERSWVYLFQTGMVFTLKLTAMAMAGGIVLGTLLAMMRLSKYKALSLPATTY 61

Query: 234 -----TLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVR 286
                ++ LI + +  +F  P +G +  IG  T      F S  I    + AA+  EI+R
Sbjct: 62  VNLIRSMPLILVIFWFYFLVPYIGAW-LIGSPTPIQVGAFSSSLITFILFEAAYYCEIMR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++PRGQ+ A  ALG+ + +    ++LPQA R++IP L +Q + L ++ SL   +  
Sbjct: 121 AGIQSIPRGQVSAGRALGMNYWQTMSNIVLPQAFRNMIPLLLTQTIVLFQDVSLVYVLSI 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            D V     I  + G+ IE+ L    +Y  +   ++L + +L  ++A+
Sbjct: 181 TDFVGAASKIAQRDGRLIEMYLFVAVVYFVMCFGLSLLVKQLQKRVAI 228


>gi|257898670|ref|ZP_05678323.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|293572583|ref|ZP_06683557.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterococcus faecium E980]
 gi|257836582|gb|EEV61656.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|291607366|gb|EFF36714.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterococcus faecium E980]
          Length = 218

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 25/176 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL I  F  F LP + +               Q N          F S   AL+ +
Sbjct: 63  RNLPLLLIIFFTYFALPQIGI---------------QMNI---------FWSAVAALTIF 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A ++EI R+GL AVP+GQMEA ++ GLT+ +  R ++LPQA +S+IP + SQ ++L+K
Sbjct: 99  ESAMLSEIFRAGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SLAV +   +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 159 DTSLAVIISLPELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214


>gi|170698798|ref|ZP_02889861.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170136276|gb|EDT04541.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 297

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 10/225 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIF-VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           G FL  R +    LT   N  +  V +  LG+VL +  T + R        A+   YI  
Sbjct: 66  GQFLTARSI----LTGLGNTIVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAQGYI-- 118

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEI 284
           +L  G P ++ + L + L    P LG        TV     F++  + L     A+ +E+
Sbjct: 119 WLFRGTPVILQLLLWFNLALVFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEV 178

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+GL++V  GQ EAA ++G+   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V
Sbjct: 179 VRAGLLSVDTGQYEAAKSIGMARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVV 238

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +A+++     I     + IE++++    YL +  +++L   R+ 
Sbjct: 239 QYAEMLHNAQNIYYANARVIELLIVAGIWYLVVVTVLSLAQARVE 283


>gi|86144266|ref|ZP_01062598.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85837165|gb|EAQ55277.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 293

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 69/112 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +   ++A+IAE++R+GL  +P+GQ EAA +LGL+     R V+ PQ + +I PPL  Q
Sbjct: 165 ICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALSKYRFVVGPQVLTAITPPLAGQ 224

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            ++L+K++S+   +   ++  VG  + N +G   EI LI  F+Y +L   ++
Sbjct: 225 AISLIKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGFVYFALCFALS 276


>gi|329943910|ref|ZP_08292179.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328531343|gb|EGF58185.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 321

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 4/159 (2%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L AL  QL    P   +      +TV   F++  + L     A+++EIVRSGL +V +GQ
Sbjct: 125 LSALYQQLSLGIPFGPELLTFKTTTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQ 184

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGT 355
            EAA ALG++  +  R ++LPQAMR I+PP  ++ +++LK +SL +AV F  DL  V  +
Sbjct: 185 SEAAGALGMSKGQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNS 244

Query: 356 IINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
             + T Q I +++   IW  I  S+ ++   ++ R   K
Sbjct: 245 YASLTYQIIPLLIVAAIWYIIITSILMVGQHYIERYYGK 283


>gi|42518173|ref|NP_964103.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41582457|gb|AAS08069.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
          Length = 537

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 75/120 (62%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+ A P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++
Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFI 450

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG T+ +QT +  +   I   IYL L+  I    N +  K+
Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILTFSITRIFNFIEKKL 510



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134
           Y + IL G   T  LA  G I    IG LVG           G+    K+V W+  VY+E
Sbjct: 296 YGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYIE 355

Query: 135 VFRNIPPLVVIFFLY 149
           VFR  P +V    +Y
Sbjct: 356 VFRGTPMMVQAAVIY 370


>gi|42522400|ref|NP_967780.1| polar amino acid transport system permease protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39574932|emb|CAE78773.1| polar amino acid transport system permease protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 247

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 76/121 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS  +AA+IAEI R+G+ ++ RGQ EAA +LGL++    + +++PQA R ++PPL ++
Sbjct: 123 LALSLNSAAYIAEIFRAGIQSIDRGQFEAARSLGLSYFHTMKSIIIPQAFRRMLPPLGNE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK+SSL  A+G A+L     T      +  E  L    IYL +++ ++  ++RL  
Sbjct: 183 AITLLKDSSLVSAIGLAELAYAARTAAGAYARYWEPYLFISLIYLIITLGMSFVVHRLEK 242

Query: 391 K 391
           +
Sbjct: 243 R 243


>gi|291519629|emb|CBK74850.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens
           16/4]
          Length = 223

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 85/139 (61%), Gaps = 24/139 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFM---SLYIA 272
           + +P++ ++ F+ FG+P L                  FN  IGG  ++   +   +  +A
Sbjct: 60  RGVPMIVLAFFIYFGIPYL------------------FNTIIGGFAINLTALQAGTACLA 101

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+C   A++AEI+R+G+ +V  GQMEAA +LGLT+ +A R V+LPQA+R++IP   +Q++
Sbjct: 102 LNC--GAYMAEIIRAGIQSVDIGQMEAARSLGLTYSQAMRKVVLPQAIRTMIPTFINQFI 159

Query: 333 NLLKNSSLAVAVGFADLVS 351
             LK++S+   +GF +LV+
Sbjct: 160 ITLKDTSILSVIGFPELVN 178


>gi|295092287|emb|CBK78394.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Clostridium cf.
           saccharolyticum K10]
          Length = 214

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 84/127 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   +AA+++E++RSG+ AV +GQMEAA +LGL HR+A   V+LPQA+++I+P L ++
Sbjct: 88  VALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLGLNHRQAMVKVILPQAIKNIMPALGNE 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K++SLA      +L++V  T+      ++E ++I   IY  ++  ++  +N +  
Sbjct: 148 FVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSLEPLIIVGCIYFIVTFSLSKGINFMER 207

Query: 391 KIALKEK 397
           ++   E+
Sbjct: 208 RMRANER 214


>gi|227551338|ref|ZP_03981387.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257887548|ref|ZP_05667201.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257896042|ref|ZP_05675695.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|293378786|ref|ZP_06624943.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|227179549|gb|EEI60521.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257823602|gb|EEV50534.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257832607|gb|EEV59028.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|292642579|gb|EFF60732.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 218

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 25/176 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL I  F  F LP + +               Q N          F S   AL+ +
Sbjct: 63  RNLPLLLIIFFTYFALPQIGI---------------QMNI---------FWSAVAALTIF 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A ++EI R+GL AVP+GQMEA ++ GLT+ +  R ++LPQA +S+IP + SQ ++L+K
Sbjct: 99  ESAMLSEIFRAGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SLAV +   +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 159 DTSLAVIISLPELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214


>gi|26987392|ref|NP_742817.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982048|gb|AAN66281.1|AE016256_8 amino acid ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
          Length = 273

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 75/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++ V RGQ EAA+ALG+   +    ++LPQAMR IIPP  +Q
Sbjct: 146 IALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQ 205

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + +E++     IY  LSI++ L   RL 
Sbjct: 206 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 264


>gi|312112152|ref|YP_003990468.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|311217253|gb|ADP75857.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 235

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 18/207 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +F +G++L++ AT L+R    K  + +  +Y+S   I G P LV +   + + +  P 
Sbjct: 42  VITFAIGLILAI-ATALARISGVKALEIIARIYVSA--IRGTPLLVQL---FIIFYGLPN 95

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G           P F +  I  S    A+ +EIVR+ ++++P+GQ EAA +LG+T  +A
Sbjct: 96  IG--------ITIPSFPAAIIGFSLNVGAYASEIVRAAILSIPKGQWEAAYSLGMTTGQA 147

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EI 366
            R V+ PQA+R  IPPL++ +++L+K++SLA  +  +++      I +   + +    E 
Sbjct: 148 LRRVIFPQAVRVSIPPLSNTFISLVKDTSLASLILVSEMFRKAQEIASTNYEFLLLYTEA 207

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +I+  I   LSI+      RLN  IA
Sbjct: 208 AIIYWIICFLLSIVQNRIEERLNRYIA 234


>gi|288550086|ref|ZP_05969253.2| glutamine ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316709|gb|EFC55647.1| glutamine ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 232

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V   V G+++ L A   +R +       + L++I   +I G P +V +   Y   F  
Sbjct: 38  ISVLGLVGGLIIGLVAG-FARTYGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FAL 91

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R
Sbjct: 92  PM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRR 145

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 146 ETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 205

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               +YL ++++++  + RL  ++ +
Sbjct: 206 AVAVVYLIITLVLSFVLRRLERRMKI 231


>gi|317506835|ref|ZP_07964608.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
 gi|316254871|gb|EFV14168.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
          Length = 473

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 14/156 (8%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FVLG+V+++  T L+R    +   AL   Y+S  +I G P LV +   + ++F  P  G 
Sbjct: 277 FVLGLVIAVL-TALARISRNRAVSALARSYVS--VIRGTPLLVQL---FLIYFALPEFG- 329

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                     P F S  +ALS    A+ +E+VR+ ++AVP GQ EAA ALG +  +  RL
Sbjct: 330 -------VKLPPFPSAVVALSLSVGAYASEVVRAAILAVPSGQSEAARALGFSRGQTLRL 382

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           V+ PQA +  +PPL++  + L+K++SLA  +   +L
Sbjct: 383 VVFPQAAKIAVPPLSNTLIALVKDTSLAATIQVTEL 418


>gi|148545936|ref|YP_001266038.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148509994|gb|ABQ76854.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 273

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 75/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++ V RGQ EAA+ALG+   +    ++LPQAMR IIPP  +Q
Sbjct: 146 IALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQ 205

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + +E++     IY  LSI++ L   RL 
Sbjct: 206 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 264


>gi|15896853|ref|NP_350202.1| amino acid ABC transporter permease [Clostridium acetobutylicum
           ATCC 824]
 gi|15026719|gb|AAK81542.1|AE007858_3 Amino acid ABC transporter, permease component [Clostridium
           acetobutylicum ATCC 824]
 gi|325511027|gb|ADZ22663.1| Amino acid ABC transporter, permease component [Clostridium
           acetobutylicum EA 2018]
          Length = 217

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 77/124 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS  + A+IAEI+R G++A+  GQ EA+ ALGLT+ +  + ++LPQA+R +IPP  ++
Sbjct: 93  LGLSLNSGAYIAEIIRGGILAIDNGQFEASKALGLTYGQTMKRIILPQAIRVVIPPCGNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K++SL   +   +L+     +++ +G A+   L     YL L+ +     +++  
Sbjct: 153 FIAMIKDTSLVSVITMEELLRKAQLLVSSSGDAVTPYLFAGIFYLILTTIFTGIFSKIEK 212

Query: 391 KIAL 394
           K+++
Sbjct: 213 KLSV 216


>gi|22126342|ref|NP_669765.1| ABC transporter permease for cystine [Yersinia pestis KIM 10]
 gi|45441365|ref|NP_992904.1| putative amino acid ABC transporter permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108807219|ref|YP_651135.1| putative amino-acid ABC transporter permease [Yersinia pestis
           Antiqua]
 gi|108812437|ref|YP_648204.1| amino-acid ABC transporter (permease) [Yersinia pestis Nepal516]
 gi|145598568|ref|YP_001162644.1| amino-acid ABC transporter (permease) [Yersinia pestis Pestoides F]
 gi|149366207|ref|ZP_01888242.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           CA88-4125]
 gi|162420463|ref|YP_001606502.1| amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926030|ref|ZP_02221862.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938721|ref|ZP_02227276.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166010948|ref|ZP_02231846.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166210693|ref|ZP_02236728.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167401053|ref|ZP_02306556.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420087|ref|ZP_02311840.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167425831|ref|ZP_02317584.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167469082|ref|ZP_02333786.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|218928966|ref|YP_002346841.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           CO92]
 gi|229896295|ref|ZP_04511465.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229897232|ref|ZP_04512388.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229897959|ref|ZP_04513110.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902810|ref|ZP_04517927.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270486599|ref|ZP_06203673.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294503990|ref|YP_003568052.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           Z176003]
 gi|21959324|gb|AAM86016.1|AE013849_7 putative ABC transporter permease for cystine [Yersinia pestis KIM
           10]
 gi|45436225|gb|AAS61781.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108776085|gb|ABG18604.1| amino-acid ABC transporter (permease) [Yersinia pestis Nepal516]
 gi|108779132|gb|ABG13190.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           Antiqua]
 gi|115347577|emb|CAL20487.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           CO92]
 gi|145210264|gb|ABP39671.1| amino-acid ABC transporter (permease) [Yersinia pestis Pestoides F]
 gi|149292620|gb|EDM42694.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           CA88-4125]
 gi|162353278|gb|ABX87226.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Angola]
 gi|165913335|gb|EDR31957.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922234|gb|EDR39411.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165990292|gb|EDR42593.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207873|gb|EDR52353.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961782|gb|EDR57803.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167049442|gb|EDR60850.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167055230|gb|EDR65027.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|229680257|gb|EEO76356.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229689000|gb|EEO81065.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693569|gb|EEO83618.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701218|gb|EEO89247.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262361825|gb|ACY58546.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           D106004]
 gi|262366039|gb|ACY62596.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           D182038]
 gi|270335103|gb|EFA45880.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294354449|gb|ADE64790.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           Z176003]
 gi|320015412|gb|ADV98983.1| putative transporter subunit: membrane component of ABC superfamily
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 220

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 114/218 (52%), Gaps = 18/218 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +     F  +LG +L++   RLS HF        P   IS F +       LIA 
Sbjct: 21  LTLQLSLGGMFFGLLLGFMLAMM--RLS-HFW-------PFSLISRFYVSIFRGTPLIAQ 70

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + +++  P   QF    G  + P   +L I LS  TAA+ +E +R+ + ++ +GQ EAA
Sbjct: 71  LFMIYYGLP---QF----GIELEPMPAAL-IGLSLNTAAYTSETLRAAISSIEKGQWEAA 122

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G+T  +A   V+LPQA R+ +PPL + ++ L+K++SLA  +   +L      I ++T
Sbjct: 123 ASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITSRT 182

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 183 MEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE 220


>gi|325292972|ref|YP_004278836.1| general L-amino acid transport system permease protein AapM
           [Agrobacterium sp. H13-3]
 gi|325060825|gb|ADY64516.1| general L-amino acid transport system permease protein AapM
           [Agrobacterium sp. H13-3]
          Length = 385

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 67/96 (69%), Gaps = 2/96 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   + +S +++A++AE++R GL A+P+GQ E A +LGL + + TRL++LPQA++ +I
Sbjct: 247 KFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQKTRLIVLPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P + + ++ L K++SL   +G  DL+ +    +NQ+
Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI--VTLNQS 340


>gi|260426627|ref|ZP_05780606.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Citreicella sp. SE45]
 gi|260421119|gb|EEX14370.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Citreicella sp. SE45]
          Length = 438

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 8/113 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ +++A+IAE+VR GL A+P+GQ EAA ALGL + K+ RLV+LPQA++  IP + + 
Sbjct: 309 IMVTLFSSAYIAEVVRGGLAALPKGQYEAADALGLDYWKSMRLVILPQALKISIPGIVNT 368

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           ++ L K+++L V +G  D + +   I   T         W  IY  L + I L
Sbjct: 369 FIGLFKDTTLVVFIGLLDPIGLSNAIRASTE--------WNGIYWELFVFIGL 413


>gi|114705498|ref|ZP_01438401.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506]
 gi|114538344|gb|EAU41465.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506]
          Length = 224

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 13/143 (9%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +  K  + L ++YI  F    +P LV + + Y   +  P LG             F S
Sbjct: 49  RLYGAKPVRFLAIVYIDVFR--AIPVLVWLVIVY---YALPFLG--------VRLSAFAS 95

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL+  ++A+ AEI R+G+ AVPRGQ EAA ++GL      R V+LPQA+R +IPPLT
Sbjct: 96  ATTALTMISSAYTAEIYRAGIEAVPRGQFEAAQSIGLGSFDLMRDVVLPQAIRIVIPPLT 155

Query: 329 SQYLNLLKNSSLAVAVGFADLVS 351
           +  +N+LK+++LA  V   DL+ 
Sbjct: 156 NNSINVLKDTALASVVALPDLLK 178


>gi|25028403|ref|NP_738457.1| glutamate transporter permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|259507460|ref|ZP_05750360.1| glutamate transport system permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|23493688|dbj|BAC18657.1| glutamate transporter permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|259164948|gb|EEW49502.1| glutamate transport system permease protein GluD [Corynebacterium
           efficiens YS-314]
          Length = 316

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 10/130 (7%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I TF    +P L+L+   YQL        ++  +    ++  F ++   L+ Y  + IAE
Sbjct: 112 IETFR--AIPVLILMIFAYQL------FARYQLVPSRQLA--FAAVVFGLTMYNGSVIAE 161

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSG+ ++P+GQ EAAIALG++ R+ T  +LLPQA+ +++P L +Q +  LK+S+L   
Sbjct: 162 ILRSGIASLPKGQREAAIALGMSTRQTTWSILLPQAVAAMLPALIAQMVIALKDSALGYQ 221

Query: 344 VGFADLVSVG 353
           +G+ ++V  G
Sbjct: 222 IGYIEVVRSG 231



 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E    + D+   P+    ++ T +L G   T   A + ++ A I+GTL+G GR+S  +
Sbjct: 44  LQENGQLDGDK-WTPFLDPQTWTTYLLPGLWGTLKAAVASILLALIMGTLLGLGRISEIR 102

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK 150
           L+ W C + +E FR IP L+++ F Y+
Sbjct: 103 LLRWFCGIIIETFRAIPVLILMIFAYQ 129


>gi|222102913|ref|YP_002539952.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739514|gb|ACM40247.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 235

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 68/111 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA+ +E +RSGL ++  GQMEAA ALG  +  A R V++PQ +R+ +PPL + 
Sbjct: 106 IGLGLCQAAYFSEDLRSGLRSISPGQMEAARALGHGYLSAMRYVMIPQGVRNALPPLINH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L KNSSLA+ VG ++L      I N T +  E  LI   +YL  S++I
Sbjct: 166 TVSLFKNSSLAIVVGASELTHAVKEIENITFRTFESYLIGTVLYLFFSLLI 216


>gi|209695502|ref|YP_002263431.1| general L-amino acid ABC transporter permease protein [Aliivibrio
           salmonicida LFI1238]
 gi|208009454|emb|CAQ79740.1| general L-amino acid ABC transporter permease protein [Aliivibrio
           salmonicida LFI1238]
          Length = 365

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 60/83 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL + K  RL++LPQA++  IP + + 
Sbjct: 235 IGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317


>gi|228989527|ref|ZP_04149512.1| Amino acid ABC transproter, permease [Bacillus pseudomycoides DSM
           12442]
 gi|228995720|ref|ZP_04155383.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock3-17]
 gi|229003347|ref|ZP_04161177.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock1-4]
 gi|228757965|gb|EEM07180.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock1-4]
 gi|228764097|gb|EEM12981.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock3-17]
 gi|228770252|gb|EEM18831.1| Amino acid ABC transproter, permease [Bacillus pseudomycoides DSM
           12442]
          Length = 230

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 75/126 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+++  A R ++LPQA R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQAFRLSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     + +E  ++    YL L ++    +N L  
Sbjct: 149 FVIGLKDSSLVAYVGMSELWGSGLSIAAGNFKQLETYIVVSAYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           K+  K+
Sbjct: 209 KLQRKQ 214


>gi|298346993|ref|YP_003719680.1| amino acid ABC transporter membrane protein [Mobiluncus curtisii
           ATCC 43063]
 gi|304389300|ref|ZP_07371265.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|298237054|gb|ADI68186.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 43063]
 gi|304327418|gb|EFL94651.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 217

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           + S  F +  IA S   AA+ AEI R G  A+P+GQ EAA  LG + ++    + LPQ  
Sbjct: 82  SASYNFWAAIIAFSVNYAAYFAEIYRGGFQAIPQGQTEAAFVLGYSQQRTFYTIKLPQMF 141

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+++P +T++ + L+K++SLA  + F ++ S+     + T      +   +F Y+  +++
Sbjct: 142 RTVLPSITNEVITLVKDTSLAQVISFLEMFSIAREYASTTASMAPFVAAGIFYYV-FNMV 200

Query: 381 IALFMNRLNAKIA 393
           +A+ MN+L  +++
Sbjct: 201 VAVTMNKLEKRVS 213


>gi|227504862|ref|ZP_03934911.1| glutamate transporter permease protein GluD [Corynebacterium
           striatum ATCC 6940]
 gi|227198553|gb|EEI78601.1| glutamate transporter permease protein GluD [Corynebacterium
           striatum ATCC 6940]
          Length = 312

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 93/166 (56%), Gaps = 21/166 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFD 247
           + + V G+V  L   RLS H         P+ ++   ++     +P L+L+   YQL   
Sbjct: 82  LLAIVFGVVFGL--GRLSEH--------RPIRWVCGVVVEFFRAIPVLLLMIFAYQL--- 128

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 ++ +    ++  F ++  AL+ Y  + +AEI+RSG+ ++P+GQ EAA ALGL+H
Sbjct: 129 ---FAVYDLVPSKHLA--FGAVVFALTLYNGSVVAEILRSGIRSLPKGQTEAAKALGLSH 183

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           ++    VLLPQA+ +++P L SQ +  LK+S+L   +G+ ++V  G
Sbjct: 184 QQTMFKVLLPQAVAAMLPALISQMVIALKDSALGYQIGYVEVVRSG 229



 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 22/141 (15%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R +N    +I A++ T +  W    +    E++ LS           
Sbjct: 4   RATVLYDAPGPKGRRNNAIYTVITAIVATAVLAWVFMKLN---ERNQLS----------- 49

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
               +   P+ +  ++ T +L G   T + A + ++ A + G + G GRLS ++ + W+C
Sbjct: 50  ---PELWTPFLNSQTWTTYLLPGLKGTIFSAVASILLAIVFGVVFGLGRLSEHRPIRWVC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYK 150
            V VE FR IP L+++ F Y+
Sbjct: 107 GVVVEFFRAIPVLLLMIFAYQ 127


>gi|121604957|ref|YP_982286.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593926|gb|ABM37365.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 255

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 80/133 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +AL+  + A+I+EI R+G+ ++ +GQ+EA+ +LG++  +    ++LPQA R ++P
Sbjct: 123 FLSGVVALTLNSGAYISEIFRAGIQSIDKGQVEASRSLGMSFPRTMYHIVLPQAFRRMLP 182

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  ++LLK+SSL  A+G A+L     T+     +  E  L    +Y  L++ +A  +
Sbjct: 183 PLGNNAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYGV 242

Query: 386 NRLNAKIALKEKK 398
            RL A+    + +
Sbjct: 243 KRLEARYGRGDSR 255


>gi|320355395|ref|YP_004196734.1| PAAT family amino acid ABC transporter membrane protein
           [Desulfobulbus propionicus DSM 2032]
 gi|320123897|gb|ADW19443.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 262

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 95/167 (56%), Gaps = 17/167 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V S  L IV+ L  T L R    +    +  LY+   ++ G+P LV      QL + 
Sbjct: 67  EVTVLSITLAIVIGLL-TGLGRLSRNRVINLIASLYVE--VVRGIPLLV------QLFYI 117

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALS-CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              LG+F  +      P+ ++  IA++ CY  A++ E+ R+G+ ++  GQ EAA++LG  
Sbjct: 118 YYALGRFVRV------PDMVAAVIAMAFCY-GAYMGEVFRAGIKSIDFGQTEAALSLGFN 170

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           HR+    V+LPQA R+I+PP+ ++++ LLK++SL   +  AD++  G
Sbjct: 171 HRQTMAYVILPQAWRTILPPVGNEFIALLKDTSLVSILAVADILRRG 217



 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    +  A +IG L G GRLS N+++  I  +YVEV R IP LV +F++Y +
Sbjct: 61  GILITFEVTVLSITLAIVIGLLTGLGRLSRNRVINLIASLYVEVVRGIPLLVQLFYIYYA 120

Query: 152 VLSVLPIPD 160
           +   + +PD
Sbjct: 121 LGRFVRVPD 129


>gi|24636876|sp|Q8RQL4|GLUD_COREF RecName: Full=Glutamate transport system permease protein gluD
 gi|20126700|dbj|BAB88901.1| gluD [Corynebacterium efficiens]
          Length = 277

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 10/130 (7%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I TF    +P L+L+   YQL        ++  +    ++  F ++   L+ Y  + IAE
Sbjct: 73  IETFR--AIPVLILMIFAYQL------FARYQLVPSRQLA--FAAVVFGLTMYNGSVIAE 122

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSG+ ++P+GQ EAAIALG++ R+ T  +LLPQA+ +++P L +Q +  LK+S+L   
Sbjct: 123 ILRSGIASLPKGQREAAIALGMSTRQTTWSILLPQAVAAMLPALIAQMVIALKDSALGYQ 182

Query: 344 VGFADLVSVG 353
           +G+ ++V  G
Sbjct: 183 IGYIEVVRSG 192



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E    + D+   P+    ++ T +L G   T   A + ++ A I+GTL+G GR+S  +
Sbjct: 5   LQENGQLDGDK-WTPFLDPQTWTTYLLPGLWGTLKAAVASILLALIMGTLLGLGRISEIR 63

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK 150
           L+ W C + +E FR IP L+++ F Y+
Sbjct: 64  LLRWFCGIIIETFRAIPVLILMIFAYQ 90


>gi|307300617|ref|ZP_07580392.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306904151|gb|EFN34736.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 288

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 7/175 (4%)

Query: 231 GLPTLVLIALKY-------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           G P LV +   Y       QL    P    +  +  +T+     +  + L     A+++E
Sbjct: 99  GTPVLVQLIFWYNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGLNEGAYMSE 158

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSGL++V  GQ +AA +LG+T+ K    +LLPQAM  IIPP  +Q + +LK SSL   
Sbjct: 159 IIRSGLMSVDPGQRQAAKSLGMTNGKTLWRILLPQAMPIIIPPTGNQTIGMLKTSSLVSV 218

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ADL+    TI ++  Q I ++++    YL+ + +++    R+    A   ++
Sbjct: 219 ISLADLLYSAQTIYSRNFQTIPLLIVACIWYLAATTILSAVQVRIERHFARSSQR 273



 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +D  + + IL G   T WL    M+   ++GT+     ++ N +++ +   Y+  FR  P
Sbjct: 42  ADYLFDSRILWGLSLTIWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANAYIWFFRGTP 101

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            LV + F Y   L  L  P  S+ +PF
Sbjct: 102 VLVQLIFWYN--LGAL-FPQLSVGVPF 125


>gi|282862286|ref|ZP_06271348.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282562625|gb|EFB68165.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 215

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 66/101 (65%), Gaps = 1/101 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  YT++F+ E VRSG+  VP GQ EAA ++G+T  +  R+V+LPQA R++IPPL+S 
Sbjct: 90  LALGLYTSSFVCEAVRSGINTVPLGQAEAARSIGMTFAQTLRMVILPQATRTVIPPLSSI 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           ++ L KNS++A A    +L      +++  G  I  + IW+
Sbjct: 150 FIALTKNSAIAGAFSVTELFG-WQKLMSDRGYDIVPVFIWV 189


>gi|262394186|ref|YP_003286040.1| amino acid ABC transporter permease [Vibrio sp. Ex25]
 gi|262337780|gb|ACY51575.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 365

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  + +A++AE+VR GL A+P+GQ EAA ALGL++ K T L++
Sbjct: 220 FMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317



 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           G + T  +A  G++ +  IG ++  GR S   ++  IC VY+EV+R +P + V+F
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLF 211


>gi|227873776|ref|ZP_03992005.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227840392|gb|EEJ50793.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 220

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 23/183 (12%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYI 271
           K    L +  I+TF    L  L+ I   YQ+    P L +F  +F+ G+ +  +    Y 
Sbjct: 17  KVPVTLEIALIATFFSLVLGILIAIISYYQVPILNP-LCKFLVSFMRGTPIVAQLYFFYF 75

Query: 272 ALSCYT--------------------AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            L+ Y+                     AF++E +R  L++V  GQ EAA++LG+TH +  
Sbjct: 76  GLAVYSVLVRDMTPISAVAFVLSVNVGAFMSESIRGALMSVEEGQKEAALSLGMTHFQVV 135

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQA+R  IPPL + ++NL+K+SSLA  +G  D++    T  +Q+ +  E+    M
Sbjct: 136 YRIVLPQAIRVAIPPLFNDFINLIKSSSLAFMLGVPDIMGAARTEGSQSYRYFEVYGAVM 195

Query: 372 FIY 374
            +Y
Sbjct: 196 LVY 198


>gi|124265325|ref|YP_001019329.1| amino acid ABC transporter [Methylibium petroleiphilum PM1]
 gi|124258100|gb|ABM93094.1| amino acid ABC transporter [Methylibium petroleiphilum PM1]
          Length = 250

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 80/132 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +AL+    A+I+EI R+G+ ++  GQ +AA +LGLTH ++ R V+LPQA+R ++P
Sbjct: 119 FFSGALALTLNAGAYISEIFRAGIQSIHGGQTQAAYSLGLTHVQSMRHVILPQAVRRMVP 178

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL ++ + L+K+SSL  A+G A+L     T+     +  E  L    +YL L+ +++   
Sbjct: 179 PLVNEAVTLIKDSSLVSAIGLAELALAARTVAGAYSRYWEPYLAISAVYLLLTWLLSTLA 238

Query: 386 NRLNAKIALKEK 397
            RL +   L+ +
Sbjct: 239 KRLESPDHLRGR 250


>gi|269968793|ref|ZP_06182782.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269826605|gb|EEZ80950.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 365

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  + +A++AE+VR GL A+P+GQ EAA ALGL++ K T L++
Sbjct: 220 FMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317



 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           G + T  +A  G++ +  IG ++  GR S   ++  IC VY+EV+R +P + V+F
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLF 211


>gi|206971176|ref|ZP_03232127.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|218899316|ref|YP_002447727.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|206733948|gb|EDZ51119.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|218541175|gb|ACK93569.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|326941933|gb|AEA17829.1| arginine ABC transporter permease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 219

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 33  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 87  -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 130 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 190 LLFVGLIYYMLVIILTLVGKAIEGRM 215


>gi|153832989|ref|ZP_01985656.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01]
 gi|148870710|gb|EDL69616.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01]
          Length = 306

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 80/144 (55%)

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           +P   Q  F G + +     S  + +   ++A+IAE+VR+GL ++ +GQ EAA +LGL+ 
Sbjct: 157 EPNAVQSFFFGPANLWENLASGVLCVGLLSSAYIAEVVRAGLQSIDKGQWEAADSLGLSS 216

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R V+ PQ +++I P L  Q ++L+K++S+   +   ++  VG  + N +G   EI 
Sbjct: 217 WVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIW 276

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           LI  F+Y  +   +++F   +  K
Sbjct: 277 LIVGFVYFLICFGLSMFFRYIEKK 300


>gi|120405655|ref|YP_955484.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119958473|gb|ABM15478.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium vanbaalenii PYR-1]
          Length = 492

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 33/208 (15%)

Query: 193 SFVLGIVLSLFATRLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + VLG++  LF  R+SR          +    +  PLL  + F+ FG+P+    AL +++
Sbjct: 308 ALVLGVMFGLF--RVSRSIWLRAIGTTYVDIFRGTPLLVQAFFIYFGVPS----ALDFRM 361

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  I LS    A++ EIVR G+ +V +GQMEAA +LG
Sbjct: 362 -------------------TALTAGIITLSLNAGAYMTEIVRGGIQSVDKGQMEAARSLG 402

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +    R V+LPQA+R++IP   +Q++  LK++S+   +G A+L   G  II +  Q+ 
Sbjct: 403 IGYLPTMRKVILPQAIRTMIPSYVNQFVITLKDTSILSVIGIAELTQTGRLIIARNYQSF 462

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + LI   IY  + + +    +RL  ++
Sbjct: 463 TMWLIIGVIYFIVIMALTKLSDRLERRL 490


>gi|27382025|ref|NP_773554.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355195|dbj|BAC52179.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 222

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 7/151 (4%)

Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           + P LGQ  FI       G  + P   ++ IAL     A+  EI+R G+ ++ +GQ+EA 
Sbjct: 66  NTPFLGQIYFIFFALPLVGVRLDPTLTAI-IALGVNGGAYAIEIIRGGVQSINKGQVEAG 124

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +AL L+  +  RL++L  A+R+I P LTSQ++ L   +S+A A+   +L SVG TI   T
Sbjct: 125 LALSLSRAQVFRLIVLKPALRAIYPSLTSQFIMLTLTTSIASAISAYELTSVGQTIETNT 184

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++ E+  +   +Y ++S M+      +NA+
Sbjct: 185 FRSFEVYGVVTLLYFAMSWMLMQMFALINAR 215


>gi|259501520|ref|ZP_05744422.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
 gi|302191507|ref|ZP_07267761.1| ABC-type amino acid transport system, permease component
           [Lactobacillus iners AB-1]
 gi|309806871|ref|ZP_07700858.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 03V1-b]
 gi|309809565|ref|ZP_07703423.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners SPIN 2503V10-D]
 gi|259167038|gb|EEW51533.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
 gi|308166737|gb|EFO68929.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 03V1-b]
 gi|308170237|gb|EFO72272.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners SPIN 2503V10-D]
          Length = 212

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 26/169 (15%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS ++G++ +L      R  H      +  +Y+  F    +P L+++ + Y +    P +
Sbjct: 29  FSLIIGVICALVEVSPCRIPH-----LIARIYVEIFR--NIPLLIIVMIFYLV---VPQM 78

Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G +    G  T         IAL+ YT+AFI+E V+SG+ ++  GQME A + G+++ +A
Sbjct: 79  GLKLTGFGAGT---------IALTLYTSAFISETVKSGINSIGIGQMEGARSNGMSYVQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGF-----ADLVSVG 353
            R V+LPQA++ +IPPL +Q+++L+KNSS LA   GF     AD++S+ 
Sbjct: 130 MRYVVLPQALKVVIPPLGNQFISLIKNSSVLAFVAGFDLMYQADVISLA 178



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G  +T   +   +  + IIG +     +S  ++   I R+YVE+FRNIP L+++   Y
Sbjct: 15  GLSSTIMCSLIAIFFSLIIGVICALVEVSPCRIPHLIARIYVEIFRNIPLLIIVMIFY 72


>gi|255284108|ref|ZP_05348663.1| glutamine ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
 gi|255265365|gb|EET58570.1| glutamine ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
          Length = 230

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 120/228 (52%), Gaps = 24/228 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224
           F+ +    + T  + T   + VF+ ++GI +  F   + R  ++KT K     AL  LY+
Sbjct: 13  FIADDRWKYLTNGLKTTLIVTVFAVLIGIAIG-FLVAVVRSTYDKTKKLKVLNALCKLYL 71

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P +V + + Y + F            GS    + +   +A    + A++AEI
Sbjct: 72  T--VIRGTPVVVQLLIIYFVIF------------GSVRIDKTIVAILAFGLNSGAYVAEI 117

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG++++  GQ EA  +LG  + +    ++LPQA+++++P L ++++ LLK +S+A  +
Sbjct: 118 IRSGIMSIDNGQFEAGRSLGFNYVQTMIYIVLPQALKNVLPALGNEFIVLLKETSVAGYI 177

Query: 345 GFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRL 388
              DL   G  I ++T  A    I + LI++ + L+ S ++++   RL
Sbjct: 178 ALEDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVLAFSKLLSILERRL 225


>gi|222082566|ref|YP_002541931.1| glutamine ABC transporter [Agrobacterium radiobacter K84]
 gi|221727245|gb|ACM30334.1| glutamine ABC transporter [Agrobacterium radiobacter K84]
          Length = 510

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   ++G+VL++     SR         LP   I T +  GLP +V I           +
Sbjct: 45  VLGVIIGMVLAVMGISQSRWLR------LPA-RIYTDIFRGLPAIVTIL----------I 87

Query: 251 LGQ-FNFIGGSTVSPEFMSL-YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L  IALS    A+I EI RSG+ +V RGQMEA  AL +++ 
Sbjct: 88  IGQGFARIGRELFGPSPFPLGIIALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 147

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364
           +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      TG   
Sbjct: 148 QGMRLIVIPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 207

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++L  +F YL +++ +  F+N ++A++ L  +
Sbjct: 208 PLLLAGVF-YLLITVPLTHFVNYIDARLRLGRQ 239


>gi|160936156|ref|ZP_02083529.1| hypothetical protein CLOBOL_01052 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440966|gb|EDP18690.1| hypothetical protein CLOBOL_01052 [Clostridium bolteae ATCC
           BAA-613]
          Length = 233

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 119/229 (51%), Gaps = 24/229 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYI 224
           F+++    + T  + T   I  F+ ++GIVL  F   + R  +EKT K     A+  +Y+
Sbjct: 16  FVSDNRWKYLTEGLKTTLIITFFACLMGIVLG-FLVGMIRSTYEKTHKLKVLNAICKVYL 74

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P +V + + Y + F            GS    + +   +A    + A++AEI
Sbjct: 75  T--VIRGTPVVVQLLIIYFVVF------------GSVRVDKVIVAILAFGVNSGAYVAEI 120

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG++++  GQMEA  +LG  + +    +++PQA ++++P L +++++LLK +S++  +
Sbjct: 121 FRSGIMSIDPGQMEAGRSLGFNYAQTMWYIIMPQAFKTVLPTLCNEFISLLKETSVSGYI 180

Query: 345 GFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389
              DL   G  I ++T  A    I + +I++ I +  + +I +   RL 
Sbjct: 181 AIQDLTKGGDIIRSRTYSAFMPLIAVAIIYLIIVMIFTKLIQILERRLR 229


>gi|114766876|ref|ZP_01445798.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Pelagibaca bermudensis HTCC2601]
 gi|114540922|gb|EAU43982.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Roseovarius sp. HTCC2601]
          Length = 438

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 8/113 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ +++A+IAE+VR GL A+P+GQ EAA ALGL + K+ RL++LPQA++  IP + + 
Sbjct: 309 IMVTLFSSAYIAEVVRGGLAALPKGQYEAADALGLDYWKSMRLIILPQALKISIPGIVNT 368

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           ++ L K+++L V +G  D + +   I   T         W  IY  L + I L
Sbjct: 369 FIGLFKDTTLVVFIGLLDPIGLSNAIRASTD--------WNGIYWELFVFIGL 413


>gi|261213024|ref|ZP_05927308.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260838089|gb|EEX64766.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 265

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 16/159 (10%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFM 267
           R  H   G+AL   YI+  ++   P LV I L Y             F+ G  +    F 
Sbjct: 89  RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLY-------------FVFGPVIGLDRFA 133

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPL
Sbjct: 134 TAVLALALFQGAYTAEVFRGGLNSIPQGQYEAAHSLGLSRFFTFYDVILPQLLQRTLPPL 193

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           T++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 194 TNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|219667105|ref|YP_002457540.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219537365|gb|ACL19104.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 195

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 60/87 (68%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + +  Y  A+IAE+VR+G+ A+ RGQMEAA++ G ++  A R V+LPQA R +
Sbjct: 63  PVFSVGVLGVGVYHGAYIAEVVRAGIQAIHRGQMEAALSQGFSYWGAMRHVILPQAARVV 122

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +PPLT+Q ++L+KN+S+   +   DL+
Sbjct: 123 LPPLTNQAVSLIKNTSVLAMIAGGDLM 149


>gi|91781168|ref|YP_556375.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693828|gb|ABE37025.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 319

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 89/149 (59%), Gaps = 3/149 (2%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PVL  F+      ++P + +  + L     A++AEIVR+G++++  GQ EAA ALG+T  
Sbjct: 158 PVL--FHGSANDLITP-YTAALLGLGLNEGAYMAEIVRAGILSIDPGQQEAARALGMTPA 214

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQA+R I+PP  ++ + +LK +SL   +  +DL+    ++ ++T Q I +++
Sbjct: 215 RILRRIVLPQAIRIIVPPAGNETIGMLKTTSLVSVIALSDLLYSVESVSSRTFQTIPLLV 274

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    YL ++ +++L  +R+   + L  +
Sbjct: 275 VACIWYLVVTSVLSLLQSRIERHLCLTRR 303



 Score = 43.9 bits (102), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A  +L G   T WL  + M    ++GTL+   R S+N  ++   ++Y+  FR  P LV +
Sbjct: 78  AHVVLSGLGLTLWLTCAAMAIGIVLGTLLAVMRTSSNPFLSVPAQLYLWFFRGTPVLVQL 137

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL 171
            F +   L++L IP  SI +PFG  L
Sbjct: 138 IFWFN--LAIL-IPQISIAIPFGPVL 160


>gi|84387892|ref|ZP_00990906.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84377238|gb|EAP94107.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 293

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 69/112 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +   ++A+IAE++R+GL  +P+GQ EAA +LGL+     R V+ PQ + +I PPL  Q
Sbjct: 165 ICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALSKYRFVVGPQVLTAITPPLAGQ 224

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            ++L+K++S+   +   ++  VG  + N +G   EI LI  F+Y +L   ++
Sbjct: 225 AISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGFVYFALCFALS 276


>gi|256851769|ref|ZP_05557157.1| ABC transporter permease component [Lactobacillus jensenii
           27-2-CHN]
 gi|260661514|ref|ZP_05862426.1| ABC transporter permease component [Lactobacillus jensenii
           115-3-CHN]
 gi|282931983|ref|ZP_06337446.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|297205391|ref|ZP_06922787.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|256615727|gb|EEU20916.1| ABC transporter permease component [Lactobacillus jensenii
           27-2-CHN]
 gi|260547571|gb|EEX23549.1| ABC transporter permease component [Lactobacillus jensenii
           115-3-CHN]
 gi|281303889|gb|EFA96028.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|297149969|gb|EFH30266.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 534

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 78/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G++A P+GQ EAA ALG++H +    ++LPQA+++ +P +T++
Sbjct: 388 IIVSINTGAYLAEVIRGGIMATPKGQFEAASALGMSHNQRMWNIILPQAIKNCLPSITNE 447

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ +  +  L+   IYL L+  I    N +  
Sbjct: 448 FIVNIKDTSVLSIISVSELFFVGSTIASQSFEFFQTYLMISAIYLMLTFSITRIFNLIEK 507

Query: 391 KI 392
           K+
Sbjct: 508 KL 509


>gi|107026631|ref|YP_624142.1| glutamine ABC transporter permease protein [Burkholderia
           cenocepacia AU 1054]
 gi|116692179|ref|YP_837712.1| glutamine ABC transporter permease protein [Burkholderia
           cenocepacia HI2424]
 gi|105896005|gb|ABF79169.1| L-glutamine ABC transporter membrane protein [Burkholderia
           cenocepacia AU 1054]
 gi|116650179|gb|ABK10819.1| L-glutamine ABC transporter membrane protein [Burkholderia
           cenocepacia HI2424]
          Length = 235

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 17/189 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V  F++G++  +F     R +  K    L  +YI   LI G P +V +     L+F  P
Sbjct: 47  LVGGFIVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 96

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L      G         +  IA++  + A++AE+VR  L+++P+G  EA +A+GL+  +
Sbjct: 97  LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI   
Sbjct: 150 VLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSA 209

Query: 370 WMFIYLSLS 378
              IYL L+
Sbjct: 210 VAVIYLILT 218


>gi|311742427|ref|ZP_07716236.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aeromicrobium marinum DSM 15272]
 gi|311314055|gb|EFQ83963.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aeromicrobium marinum DSM 15272]
          Length = 215

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 13/117 (11%)

Query: 233 PTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LVLI L Y   +  P +G  F F G  T         +A+  YTAAF+ E +RSG+  
Sbjct: 62  PLLVLILLTY---YGLPRVGIDFGFFGNIT---------LAMGVYTAAFVCEAIRSGING 109

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           VP GQ EAA A+G+        V+LPQA+R ++PP+ S ++ L KN+SLA   G A+
Sbjct: 110 VPIGQAEAARAIGMPFATTMSQVVLPQAVRLVVPPMASVFIALTKNTSLAATFGIAE 166



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)

Query: 89  ILVGFVNTFWLAFSGMIPAT--------IIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +L+  V+ FWL F+  +           ++G L+G  R+S   ++  +  VYV +FRN P
Sbjct: 3   VLIDNVDQFWLGFTETVKLLLASSALALVVGVLIGVARVSPVSVLRRLGSVYVVLFRNTP 62

Query: 141 PLVVIFFLY 149
            LV+I   Y
Sbjct: 63  LLVLILLTY 71


>gi|163789522|ref|ZP_02183960.1| glutamine ABC transporter, permease/substrate-binding protein
           [Carnobacterium sp. AT7]
 gi|159875054|gb|EDP69120.1| glutamine ABC transporter, permease/substrate-binding protein
           [Carnobacterium sp. AT7]
          Length = 484

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 112/204 (54%), Gaps = 17/204 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F  + V+G++L LF+   +          +  LY++  ++ G+P   LI L + ++F  P
Sbjct: 296 FAIALVVGVILGLFSATSNNLL-----SGISTLYVT--IMRGIP---LIVLAFFVYFSIP 345

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              QF  I  S     +++  I LS  T+A+I+E+VR G+ AV  GQ+EAA +LGL ++ 
Sbjct: 346 ---QFLNIQLSA----YLAGVITLSLNTSAYISELVRGGIQAVAGGQLEAARSLGLPYKT 398

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + R ++LPQA++ +IP   +Q++  LK++S+   +G  +L   G  II +T  +  + LI
Sbjct: 399 SMRKIVLPQAIKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSGNMWLI 458

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              +Y+ L  ++      L  K+A
Sbjct: 459 IGIMYIVLITILTKLSTVLERKMA 482



 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 14/94 (14%)

Query: 79  YTSDSSYA--------------TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           YTS++S A              + +L G   T  L       A ++G ++G    ++N L
Sbjct: 257 YTSENSEAATSNNFFTLIQNNYSELLTGLGRTLVLTLVSFAIALVVGVILGLFSATSNNL 316

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           ++ I  +YV + R IP +V+ FF+Y S+   L I
Sbjct: 317 LSGISTLYVTIMRGIPLIVLAFFVYFSIPQFLNI 350


>gi|242372074|ref|ZP_04817648.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis M23864:W1]
 gi|242350186|gb|EES41787.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis M23864:W1]
          Length = 239

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 95/155 (61%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITIVTFILGLIIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLITNDADNQWTLAPVVAAI-IGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +R+  + ++LPQA+R  IP L + +L L+K++SL
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181


>gi|46578523|ref|YP_009331.1| glutamine ABC transporter permease [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603894|ref|YP_968294.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|46447934|gb|AAS94590.1| glutamine ABC transporter, permease protein [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120564123|gb|ABM29867.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232450|gb|ADP85304.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 223

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE   + +A++  + A+IAEIVR  + ++  GQ EA  ++GLT  +    ++ PQ
Sbjct: 85  GMRIPPETAGI-LAIAVNSGAYIAEIVRGAIASIDTGQSEAGRSIGLTRLQTMLYIIWPQ 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R +IPPL +Q++  LK++SL V +G  +L   G  II    +A E+ L     YL+++
Sbjct: 144 AFRRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAVFYLAMT 203

Query: 379 IMIALFMNRLNAKIALKEKK 398
           + IA  + RL    + +  +
Sbjct: 204 LSIAWALRRLERSFSARSAR 223


>gi|68535882|ref|YP_250587.1| putative ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|68263481|emb|CAI36969.1| putative ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
          Length = 315

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 77/126 (61%), Gaps = 4/126 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L    AA++AEIVR+G+ AVP GQ EA+ ALG+T  +  R  ++PQAMR IIP
Sbjct: 152 FILAVLGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWGQNMRRTVMPQAMRIIIP 211

Query: 326 PLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381
           P  +++++LLK +SL +AV + A+L      I N   Q + ++L+   W  +  S+ ++ 
Sbjct: 212 PTGNEFISLLKTTSLVIAVPYTAELYGRATDISNSLFQPVPLLLVAATWYLVITSILMVG 271

Query: 382 ALFMNR 387
             ++ R
Sbjct: 272 QFYVER 277


>gi|107103710|ref|ZP_01367628.1| hypothetical protein PaerPA_01004781 [Pseudomonas aeruginosa PACS2]
 gi|218889478|ref|YP_002438342.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254237068|ref|ZP_04930391.1| hypothetical protein PACG_03105 [Pseudomonas aeruginosa C3719]
 gi|254242875|ref|ZP_04936197.1| hypothetical protein PA2G_03644 [Pseudomonas aeruginosa 2192]
 gi|126168999|gb|EAZ54510.1| hypothetical protein PACG_03105 [Pseudomonas aeruginosa C3719]
 gi|126196253|gb|EAZ60316.1| hypothetical protein PA2G_03644 [Pseudomonas aeruginosa 2192]
 gi|218769701|emb|CAW25461.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 234

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 81/133 (60%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++ G+P L++I   Y   F   + GQ         + +F ++ +AL  + A ++AEIVR
Sbjct: 68  FVVRGVPLLMVIFWAY--FFLPTLTGQ--------RTDQFTTMLLALVLFDAVYLAEIVR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  + RGQ EAA +LGL +  + RLV+LPQA+R+++P L +Q+++ +K +SL   +G 
Sbjct: 118 AGIQGLDRGQFEAARSLGLGYLASMRLVILPQALRNMLPSLVNQFVSTIKETSLGYIIGL 177

Query: 347 ADLVSVGGTIINQ 359
           A++  +   I  Q
Sbjct: 178 AEVSFIASQINTQ 190


>gi|307729014|ref|YP_003906238.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583549|gb|ADN56947.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 245

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 70/124 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L  YT + I E VR+G+ A P GQ  AA ALGLT  +A R VLLP   R+I+ PLTS+
Sbjct: 116 VSLGVYTGSRICEQVRAGIQARPVGQFHAAFALGLTRAQAYRHVLLPVTFRTILGPLTSE 175

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L + KNS++A  +G  +L      +++ T Q  E  +     Y+ L+  I   M  +  
Sbjct: 176 FLIISKNSAVASTIGLLELSGEARQLVDYTAQPYESFICVTLAYVGLNFAILRGMRWVRR 235

Query: 391 KIAL 394
           + AL
Sbjct: 236 RTAL 239


>gi|42518678|ref|NP_964608.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii NCC 533]
 gi|41582964|gb|AAS08574.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii NCC 533]
          Length = 216

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 34/205 (16%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFVLG+VL        ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVLGLVLGFIRYVKIKYLSAIVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+ IAL  +  A +AEIVRSG+ AV  GQME A + G+T
Sbjct: 83  ------------GIITNPTVASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A   V++PQA+  +IP L SQ+++L+K++SLA  +   +L+     I +Q       
Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQNTTY--- 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            LI M++ +++   I  F   + AK
Sbjct: 187 -LIPMYVIIAIMYFIVCFSLSMVAK 210


>gi|329295877|ref|ZP_08253213.1| glutamine ABC transporter permease protein [Plautia stali symbiont]
          Length = 219

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 90  FTAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSRRETLRYVIMPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            R+  ++ +
Sbjct: 210 RRIEKRVKI 218


>gi|228922903|ref|ZP_04086200.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228836759|gb|EEM82103.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 225

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 39  GFILGTLLALCKIVRIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 93  -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221


>gi|228954439|ref|ZP_04116464.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228974247|ref|ZP_04134817.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228980838|ref|ZP_04141143.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis Bt407]
 gi|229180433|ref|ZP_04307776.1| Arginine transport system permease protein artQ [Bacillus cereus
           172560W]
 gi|228603180|gb|EEK60658.1| Arginine transport system permease protein artQ [Bacillus cereus
           172560W]
 gi|228779007|gb|EEM27269.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis Bt407]
 gi|228785587|gb|EEM33596.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228805096|gb|EEM51690.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 225

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 39  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 93  -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221


>gi|325068922|ref|ZP_08127595.1| polar amino acid ABC transporter inner membrane subunit
           [Actinomyces oris K20]
          Length = 321

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 4/136 (2%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +TV   F++  + L     A+++EIVRSGL +V +GQ EAA ALG++  +  R ++LPQA
Sbjct: 148 TTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEAAGALGMSRGQILRRIVLPQA 207

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL---IWMFIYL 375
           MR I+PP  ++ +++LK +SL +AV F  DL  V  +  + T Q I ++L   IW  I  
Sbjct: 208 MRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNSYASLTYQIIPLLLVAAIWYIIIT 267

Query: 376 SLSIMIALFMNRLNAK 391
           S+ ++   ++ R   K
Sbjct: 268 SILMVGQHYIERYYGK 283


>gi|306818522|ref|ZP_07452245.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus mulieris ATCC 35239]
 gi|307701066|ref|ZP_07638091.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
 gi|304648695|gb|EFM45997.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus mulieris ATCC 35239]
 gi|307614061|gb|EFN93305.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
          Length = 217

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 3/140 (2%)

Query: 256 FIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           ++ G  +S E  F ++ IA +   AA+ AEI R G  A+P GQ EAA  LG + R+    
Sbjct: 75  YLFGVQISAEYRFYAVIIAFAINYAAYFAEIYRGGFQAIPAGQSEAAFVLGYSQRRTFFT 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           + +PQ  R+++P +T++ + L+K++SLA A+ + ++ ++     + T      +   +F 
Sbjct: 135 IKVPQMFRTVLPSITNEVITLVKDTSLAFAISYTEMFTLAKQYASSTASMAPFVAAAVFY 194

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           Y+  +I++A+ M+RL   ++
Sbjct: 195 YV-FNIVVAVLMDRLEKHVS 213


>gi|227894251|ref|ZP_04012056.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863971|gb|EEJ71392.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 494

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 18/200 (9%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I VFS ++GIVL +    L R    K    + + YI    I G P +V I   Y      
Sbjct: 301 ITVFSVLIGIVLGMLLA-LMRLSQNKLLHWIAVCYIE--FIRGTPQMVQILFVY------ 351

Query: 249 PVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F  G  +S     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 352 -------FGIGVLISNLSALVAGIIAIGLNSGAYVAEDIRSGISSVAKGQTEAARSLGLS 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 405 QAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 464

Query: 367 ILIWMFIYLSLSIMIALFMN 386
           + I M IY  ++  +   +N
Sbjct: 465 LFIAMIIYFIMTFTLTRLLN 484



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            VN   N++EK  L +   +L E A +   +      + + Y    + G   T  +    
Sbjct: 249 AVNKTINHVEKKKL-IDKEYLPEAAKYM--KTAKKTNTMAKYVPYFIKGVGYTIVITVFS 305

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V I F+Y
Sbjct: 306 VLIGIVLGMLLALMRLSQNKLLHWIAVCYIEFIRGTPQMVQILFVY 351


>gi|170016703|ref|YP_001727622.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803560|gb|ACA82178.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 482

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP ++                        T  P F +  + L   
Sbjct: 328 RGLPLMVLAFFIYIGLPGVI-----------------------GTKIPAFTAGLLTLILN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  VR G  AV RGQMEAA +LGL + K+ R V++PQ ++ +IP   +Q++  LK
Sbjct: 365 EGAYTAAFVRGGFEAVDRGQMEAARSLGLPYSKSMRRVIMPQGLKIMIPSFINQFIITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+  A+G  +L   G  I+++  Q   +  I   IYL
Sbjct: 425 DTSILSAIGILELTQTGSLIVSRNSQGFRVWAIVAVIYL 463


>gi|228902666|ref|ZP_04066816.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis IBL 4222]
 gi|228941315|ref|ZP_04103868.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228967196|ref|ZP_04128232.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|229071660|ref|ZP_04204877.1| Arginine transport system permease protein artQ [Bacillus cereus
           F65185]
 gi|229081412|ref|ZP_04213914.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock4-2]
 gi|229152355|ref|ZP_04280547.1| Arginine transport system permease protein artQ [Bacillus cereus
           m1550]
 gi|229192365|ref|ZP_04319329.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 10876]
 gi|228591145|gb|EEK49000.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 10876]
 gi|228630963|gb|EEK87600.1| Arginine transport system permease protein artQ [Bacillus cereus
           m1550]
 gi|228701902|gb|EEL54386.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock4-2]
 gi|228711455|gb|EEL63413.1| Arginine transport system permease protein artQ [Bacillus cereus
           F65185]
 gi|228792565|gb|EEM40131.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228818474|gb|EEM64546.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228856981|gb|EEN01491.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis IBL 4222]
          Length = 222

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 36  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 89

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 90  -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 133 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 192

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 193 LLFVGLIYYMLVIILTLVGKAIEGRM 218


>gi|218676306|ref|YP_002395125.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
 gi|218324574|emb|CAV26091.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
          Length = 308

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 69/112 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +   ++A+IAE++R+GL  +P+GQ EAA +LGL+     R V+ PQ + +I PPL  Q
Sbjct: 180 ICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALSKYRFVVGPQVLTAITPPLAGQ 239

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            ++L+K++S+   +   ++  VG  + N +G   EI LI  F+Y +L   ++
Sbjct: 240 AISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGFVYFALCFALS 291


>gi|167836531|ref|ZP_02463414.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 194

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +AL+  T A+ +EI+R+GL AVP GQ EA+ A+GL+     RL+++PQ +R  IP
Sbjct: 61  FLSSVLALAWCTGAYTSEIIRAGLQAVPHGQREASYAIGLSEVDTLRLIIVPQGLRVSIP 120

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL    + +L+ +SL   V   +LV+    I N+T   + ++++   +Y ++ +   L +
Sbjct: 121 PLLGFGVIMLQTTSLCFTVALPELVTKAQQIGNETFLYMPVLILAALLYTAICVPSTLLV 180

Query: 386 NRLNAKIALKEKK 398
           + L  +++  E +
Sbjct: 181 SSLERRLSRHEAR 193


>gi|84394263|ref|ZP_00992989.1| ABC-type amino acid transport system, permease component [Vibrio
           splendidus 12B01]
 gi|84375102|gb|EAP92023.1| ABC-type amino acid transport system, permease component [Vibrio
           splendidus 12B01]
          Length = 365

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 61/83 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K T L++LPQA++  IP + + 
Sbjct: 235 VGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317


>gi|296132383|ref|YP_003639630.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola sp. JR]
 gi|296030961|gb|ADG81729.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola potens JR]
          Length = 220

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 71/119 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +    L     A+I+EI+R+ ++A+  GQ EAA+ALGLT  +  R V+ PQA+R  
Sbjct: 86  PAFTAAVTGLGLNGGAYISEIIRAAVLAIDPGQQEAALALGLTRLQTLRYVIFPQAVRIA 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +PPL + + ++LK SSL   +   ++  +G  I  +T +A E+ L+   IY  L+ +++
Sbjct: 146 VPPLMNTFSSMLKESSLVSVLAICEISRLGQLIYTRTFRAFEVYLVVGAIYFCLTFLVS 204


>gi|228983609|ref|ZP_04143813.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228776094|gb|EEM24456.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 225

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 77/131 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IP
Sbjct: 79  FWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIP 138

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F+
Sbjct: 139 PLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYMIVGLYYLVLVLLFTYFV 198

Query: 386 NRLNAKIALKE 396
           N L  ++  KE
Sbjct: 199 NLLEKRLQRKE 209


>gi|170697812|ref|ZP_02888898.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170137314|gb|EDT05556.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 218

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 17/189 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V  F++G++  +F     R +  K    L  +YI   LI G P +V +     L+F  P
Sbjct: 30  LVGGFIVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L      G         +  IA++  + A++AE+VR  L+++P+G  EA +A+GL+  +
Sbjct: 80  LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI   
Sbjct: 133 VLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSA 192

Query: 370 WMFIYLSLS 378
              IYL L+
Sbjct: 193 VAIIYLILT 201


>gi|145223751|ref|YP_001134429.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|315444078|ref|YP_004076957.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|145216237|gb|ABP45641.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium gilvum PYR-GCK]
 gi|315262381|gb|ADT99122.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 493

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 33/209 (15%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKT-G-------KALPLLYISTFLIFGLPTLVLIALKYQ 243
           F+ +LG++  L   R+SR    +  G       +  PLL  + F+ FG+P      + +Q
Sbjct: 308 FALILGVIFGL--ARVSRSIWLRAIGTTFVDIFRGTPLLVQAFFIYFGIPA----TMGFQ 361

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +               S V+       I LS    A++ EIVR G+++V +GQMEAA +L
Sbjct: 362 M---------------SAVTAGI----ITLSLNAGAYMTEIVRGGILSVDKGQMEAARSL 402

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ +    R V+LPQA+R++IP   +Q++  LK++S+   +G A+L   G  II    +A
Sbjct: 403 GIGYLPTMRKVILPQAIRTMIPSYINQFVITLKDTSILSVLGIAELTQSGRIIIAGNYKA 462

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E+ LI   IY  + + +    +RL  ++
Sbjct: 463 FEMWLIVGVIYFIVIMALTKLSDRLERRL 491


>gi|86750027|ref|YP_486523.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris HaA2]
 gi|86573055|gb|ABD07612.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris HaA2]
          Length = 501

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/96 (42%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      M + I ++ +  A+ AE+VR GL A+PRGQ EAA ALGL++ K T L++
Sbjct: 354 FLPGNFTIDGLMRVLIGVALFAGAYNAEVVRGGLNAIPRGQAEAASALGLSYAKTTGLIV 413

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA+R +IP L + ++ L K++SL   V   DL+ 
Sbjct: 414 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 449


>gi|229820932|ref|YP_002882458.1| polar amino acid ABC transporter, inner membrane subunit
           [Beutenbergia cavernae DSM 12333]
 gi|229566845|gb|ACQ80696.1| polar amino acid ABC transporter, inner membrane subunit
           [Beutenbergia cavernae DSM 12333]
          Length = 294

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 76/122 (62%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ Y  A IAE+VRSG+  +PRGQ EAA A+G+TH ++ R+V LPQA+ +++P L SQ+
Sbjct: 147 GLTLYNGAVIAELVRSGVFGLPRGQKEAAYAVGMTHGQSLRVVELPQALLAMLPSLVSQF 206

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK+S+L   V + +L+     +    G  ++ +L    I++ ++ ++      L ++
Sbjct: 207 VVILKDSALGSWVTYGELLQFSRQLGTSDGNLLQTLLTAAVIFIVINYVLTRAAQYLASR 266

Query: 392 IA 393
           I+
Sbjct: 267 IS 268



 Score = 43.5 bits (101), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E+   + D+ + P  +  S+    L G  NT   A   ++ A   G L G GRL+   
Sbjct: 41  LGEKGQLDPDKWL-PLFTSRSWLNFFLPGLQNTLVAALYAIVLALAFGLLFGLGRLAPLA 99

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149
            V W+C   VE FR +P L+++  +Y
Sbjct: 100 PVRWVCGTVVEFFRAVPVLMMMIVIY 125


>gi|91763206|ref|ZP_01265170.1| ABC transporter permease component [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717619|gb|EAS84270.1| ABC transporter permease component [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 246

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 23/150 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+PLL +  ++ +GLP +                       G + SP F+S  IAL+  
Sbjct: 88  RAIPLLVLILWIYYGLPIMT----------------------GLSFSP-FVSGIIALAIS 124

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF AEI R+G+ ++ + Q EA  +LGLT  K  RLV+LPQA+++I+P L +Q++ +LK
Sbjct: 125 ESAFQAEIFRAGINSIKKSQWEAGSSLGLTFYKRLRLVILPQAIKNILPALGNQFVYVLK 184

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            SSL   +G  DL      ++  T + +EI
Sbjct: 185 MSSLVSIIGIGDLTRKANELVVSTYRPLEI 214


>gi|86148622|ref|ZP_01066904.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. MED222]
 gi|218709392|ref|YP_002417013.1| ABC transporter transmembrane protein [Vibrio splendidus LGP32]
 gi|85833578|gb|EAQ51754.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. MED222]
 gi|218322411|emb|CAV18564.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
          Length = 365

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 59/78 (75%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           ++AA++AE++R GL A+P+GQ EAA ALGL++ K T L++LPQA++  IP + + ++ L 
Sbjct: 240 FSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNTFIGLF 299

Query: 336 KNSSLAVAVGFADLVSVG 353
           K++SL + +G  D++ +G
Sbjct: 300 KDTSLVLIIGMFDVLGIG 317


>gi|300690823|ref|YP_003751818.1| amino acid transmembrane abc transporter protein [Ralstonia
           solanacearum PSI07]
 gi|299077883|emb|CBJ50522.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum PSI07]
          Length = 230

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 65/92 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++  AL  +  A++AEIVR+G+ A+PRGQME+A +LGL + +A RLV+LPQA+R+++
Sbjct: 94  QFNTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLPYLQAMRLVILPQALRNML 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           P L +Q ++ +K +SL   +   ++  V G I
Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEVSFVAGQI 185


>gi|241554153|ref|YP_002979366.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863459|gb|ACS61121.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 235

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 69/111 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA+ +E +RSG+ +V  GQM+AA ALG  +  A R V++PQ +R+ +PPL + 
Sbjct: 106 IGLGLCQAAYFSEDLRSGVRSVSPGQMQAARALGHGYVSAMRFVIMPQGVRNALPPLINH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L KNSSLAV +G ++L      I N + +  EI LI   +YL  S++I
Sbjct: 166 SVSLFKNSSLAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVI 216


>gi|120403415|ref|YP_953244.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956233|gb|ABM13238.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 291

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 11/118 (9%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ Y  A IAEIVR+G+ A+PRGQ EAA ALGLT  +  R +LLPQA+ S++P L SQ 
Sbjct: 146 GLTLYNGAVIAEIVRAGVHALPRGQTEAASALGLTWGQTMRSILLPQAITSMLPVLISQL 205

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +LK+++L   + F ++V  G  I +  G            Y+   I+IAL M  LN
Sbjct: 206 VVVLKDTALGYQITFVEMVRQGTVIGSAYGN-----------YIPALIVIALLMIALN 252



 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+ +   + T +L G   T   A   ++ A  +G ++G GRLS +  + W   V+VE FR
Sbjct: 53  PFLTADLWRTYVLPGIEGTLTAAAVSIVLALALGFVLGVGRLSTHTAIRWASSVFVEFFR 112

Query: 138 NIPPLVVIFFLY 149
            +P L+++ F Y
Sbjct: 113 AVPVLIMMIFAY 124


>gi|89056449|ref|YP_511900.1| amino acid ABC transporter permease [Jannaschia sp. CCS1]
 gi|88865998|gb|ABD56875.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Jannaschia sp. CCS1]
          Length = 293

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 63/94 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F G     P  +S  + L+ + +AF+ EIVR+G+ +VP+GQ EAA ++G++  +  R ++
Sbjct: 154 FFGDMRRFPSLISGVVVLALFESAFVGEIVRAGIQSVPKGQREAARSIGMSRWQELRYIV 213

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           LPQAM+ ++PP+ +Q++ L+K+SS+   +   +L
Sbjct: 214 LPQAMKKVVPPMANQFITLIKDSSIISLISVQEL 247


>gi|228909989|ref|ZP_04073809.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis IBL 200]
 gi|228849506|gb|EEM94340.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis IBL 200]
          Length = 225

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 39  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 93  -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221


>gi|313497021|gb|ADR58387.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 263

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 75/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++ V RGQ EAA+ALG+   +    ++LPQAMR IIPP  +Q
Sbjct: 136 IALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIILPQAMRVIIPPTANQ 195

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + +E++     IY  LSI++ L   RL 
Sbjct: 196 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELLQARLE 254


>gi|309804200|ref|ZP_07698277.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 11V1-d]
 gi|309805504|ref|ZP_07699549.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 09V1-c]
 gi|309808678|ref|ZP_07702570.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 01V1-a]
 gi|312871462|ref|ZP_07731556.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 3008A-a]
 gi|312872438|ref|ZP_07732507.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2062A-h1]
 gi|312874450|ref|ZP_07734480.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2052A-d]
 gi|312874526|ref|ZP_07734551.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2053A-b]
 gi|315653363|ref|ZP_07906285.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|325911895|ref|ZP_08174299.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners UPII 143-D]
 gi|325913433|ref|ZP_08175799.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners UPII 60-B]
 gi|329920206|ref|ZP_08277018.1| putative glutamine ABC transporter permease protein GlnM
           [Lactobacillus iners SPIN 1401G]
 gi|308163603|gb|EFO65873.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 11V1-d]
 gi|308165155|gb|EFO67393.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 09V1-c]
 gi|308168152|gb|EFO70278.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 01V1-a]
 gi|311089917|gb|EFQ48336.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2053A-b]
 gi|311090062|gb|EFQ48476.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2052A-d]
 gi|311092020|gb|EFQ50395.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2062A-h1]
 gi|311092982|gb|EFQ51332.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 3008A-a]
 gi|315489288|gb|EFU78928.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|325476401|gb|EGC79563.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners UPII 143-D]
 gi|325477202|gb|EGC80348.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners UPII 60-B]
 gi|328936427|gb|EGG32873.1| putative glutamine ABC transporter permease protein GlnM
           [Lactobacillus iners SPIN 1401G]
          Length = 212

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 26/169 (15%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS ++G++ +L      R  H      +  +Y+  F    +P L+++ + Y +    P +
Sbjct: 29  FSLIIGVICALVEVSPCRIPH-----LIARIYVEIFR--NIPLLIIVMIFYLV---VPQM 78

Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G +    G  T         IAL+ YT+AFI+E V+SG+ ++  GQME A + G+++ +A
Sbjct: 79  GLKLTGFGAGT---------IALTLYTSAFISETVKSGINSIGIGQMEGARSNGMSYVQA 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGF-----ADLVSVG 353
            R V+LPQA++ +IPPL +Q+++L+KNSS LA   GF     AD++S+ 
Sbjct: 130 MRYVVLPQALKVVIPPLGNQFISLIKNSSVLAFVAGFDLMYQADVISLA 178



 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G  +T   +   +  + IIG +     +S  ++   I R+YVE+FRNIP L+++   Y
Sbjct: 15  GLSSTIMCSLIAIFFSLIIGVICALVEVSPCRIPHLIARIYVEIFRNIPLLIIVMIFY 72


>gi|163868658|ref|YP_001609867.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella tribocorum CIP 105476]
 gi|161018314|emb|CAK01872.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella tribocorum CIP 105476]
          Length = 250

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 75/114 (65%), Gaps = 2/114 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +T+A IAE VRSG+ A+  GQ  AA+A+G T  ++ R ++LP+A+R+I+PPLTS+ 
Sbjct: 120 ALGFFTSARIAEQVRSGIEAISSGQRYAAMAMGFTTYQSYRYIILPRAIRAIMPPLTSEA 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWMFIYLSLSIMIAL 383
           + ++KNSS+A AV   +L+      I +     E  +++  ++I+++L + I +
Sbjct: 180 MGIVKNSSIAFAVSINELMQFQYQAIEEISHVYENYLLVTILYIFIALCVFIVM 233



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICR----VYVEVFRN 138
           +Y   +L GF NT  L+ + +I A   G ++G  R L    ++  +CR    ++VE+ RN
Sbjct: 28  TYLDTLLDGFKNTVILSITSLILAIFCGVIIGTMRTLPKTSIINCVCRTLGALWVEIMRN 87

Query: 139 IPPLVVIFFLYKSVLSVLP 157
           IP LV +F  Y  V  + P
Sbjct: 88  IPLLVQVFLWYFVVPKIYP 106


>gi|260904716|ref|ZP_05913038.1| amino acid ABC transporter membrane protein [Brevibacterium linens
           BL2]
          Length = 280

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 64/91 (70%), Gaps = 1/91 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+T+   F S+ I L+ Y    +AEI+R+G++AVP+GQ EAA+A+GL   +   LVL+PQ
Sbjct: 129 GNTIG-AFWSVVIGLTLYNGMVLAEIIRAGILAVPKGQREAAMAIGLRPGQVMSLVLMPQ 187

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A+R+++P + +Q + LLK+S+L   V + DL
Sbjct: 188 ALRAMMPTIIAQIVVLLKDSALGFIVTYQDL 218


>gi|268318646|ref|YP_003292302.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
 gi|262397021|emb|CAX66035.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
          Length = 537

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 75/120 (62%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE++R G+ A P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++
Sbjct: 391 VSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNEFI 450

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG T+ +QT +  +   I   IYL L+  I    N +  K+
Sbjct: 451 VNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILTFSITRIFNFIERKL 510



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134
           Y + IL G   T  LA  G I    IG LVG           G+    K+V W+  VY+E
Sbjct: 296 YGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYIE 355

Query: 135 VFRNIPPLVVIFFLY 149
           VFR  P +V    +Y
Sbjct: 356 VFRGTPMMVQAAVIY 370


>gi|299770478|ref|YP_003732504.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. DR1]
 gi|298700566|gb|ADI91131.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. DR1]
          Length = 225

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 8/166 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P   LI + +  +F  P +  F F   +   P F S+ +  + + AAF +EIVRSG+ 
Sbjct: 64  GIP---LIQVIFIFYFLLPKI--FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQ 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ RGQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +   D +
Sbjct: 118 SISRGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFL 177

Query: 351 SVGGTIINQTGQAIE--IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               T+ N  G   +    LI   +Y   S +++  + RL  KIA+
Sbjct: 178 GRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQQKIAI 223



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS N + +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNNAIASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LY 149
            Y
Sbjct: 74  FY 75


>gi|295426255|ref|ZP_06818916.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter [Lactobacillus amylolyticus DSM
           11664]
 gi|295064100|gb|EFG55047.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter [Lactobacillus amylolyticus DSM
           11664]
          Length = 536

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 72/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++
Sbjct: 390 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNE 449

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +QT Q     L    IYL L+  I    N
Sbjct: 450 FIVNIKDTSVLSIISVSELFFVGTTIASQTFQFFPTYLTISAIYLVLTFTITRIFN 505


>gi|226309415|ref|YP_002769375.1| ABC transporter substrate-binding/permease protein [Rhodococcus
           erythropolis PR4]
 gi|226188532|dbj|BAH36636.1| putative ABC transporter substrate-binding/permease protein
           [Rhodococcus erythropolis PR4]
          Length = 594

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 98/171 (57%), Gaps = 13/171 (7%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +  GLP +V+I +          LG    + G T S  +     ALS   +A+I EI 
Sbjct: 410 TDIFRGLPAVVIILIIG--------LGVGPIVKGITGSNPYWLGVAALSLLASAYIGEIF 461

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V  GQ+EA+ ALG ++RK+  LV++PQ +R ++P L +Q+++L+K+SSL   +G
Sbjct: 462 RSGIQSVESGQLEASRALGFSYRKSMSLVVIPQGVRRVLPALMNQFISLIKDSSLIYFLG 521

Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 +L +VG  +  QTG    ++   +F YL+L+I +   +N ++ ++
Sbjct: 522 LLVTQRELFAVGRDLNAQTGSLSPLVAAGLF-YLALTIPLTHLVNYIDNRL 571



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G  NT  LA +  I  TI+G L+    +S  + + W  RVY ++FR +P +V+I  +  
Sbjct: 368 TGLPNTLILALASGIIGTILGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILIIG- 426

Query: 151 SVLSVLPI 158
             L V PI
Sbjct: 427 --LGVGPI 432


>gi|222081595|ref|YP_002540959.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726274|gb|ACM29363.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 219

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 102/191 (53%), Gaps = 18/191 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS++ G+     A  L+     +  +     Y+  + + G PTL+ +   + ++F  P 
Sbjct: 32  IFSWICGL-----AAALAHGSKWRAARMASAFYV--WFVRGTPTLIQV---FIIYFGLPA 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G         +SP F++  ++L   + A++AEI+R GL A+PRGQ E+A+ALG +  + 
Sbjct: 82  FGI-------KLSP-FVAGVLSLGINSGAYVAEIIRGGLSAIPRGQTESALALGFSPSET 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQ  R I+P +T++ ++ LKN+SL   +   +L     T+I  T +  E  +  
Sbjct: 134 MRSIILPQVSRIILPSITNEAISTLKNTSLLSTITVVELTLYAQTLIAATFRPFEFYITV 193

Query: 371 MFIYLSLSIMI 381
             IYL L+ ++
Sbjct: 194 AIIYLVLTTIL 204


>gi|170735823|ref|YP_001777083.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169818011|gb|ACA92593.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 218

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 17/189 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V  F++G++  +F     R +  K    L  +YI   LI G P +V +     L+F  P
Sbjct: 30  LVGGFIVGMIAGMF-----RAYGPKAMNVLAQVYIE--LIRGTPIVVQVMF---LYFALP 79

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L      G         +  IA++  + A++AE+VR  L+++P+G  EA +A+GL+  +
Sbjct: 80  LLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPR 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI   
Sbjct: 133 VLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSA 192

Query: 370 WMFIYLSLS 378
              IYL L+
Sbjct: 193 VAVIYLILT 201


>gi|15888896|ref|NP_354577.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156666|gb|AAK87362.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 385

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 63/88 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   + +S +++A++AE++R GL A+P+GQ E A +LGL + + TRL++LPQA++ +I
Sbjct: 247 KFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQKTRLIVLPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ L K++SL   +G  DL+ +
Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334


>gi|134093510|ref|YP_001098585.1| glutamate/aspartate ABC transporter membrane protein [Herminiimonas
           arsenicoxydans]
 gi|133737413|emb|CAL60456.1| Glutamate/aspartate transport system permease protein gltK
           [Herminiimonas arsenicoxydans]
          Length = 228

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 75/127 (59%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S YI    + AA+  EI+R+G+ ++ +GQ+ AA ALGL++ +A RLV+LPQA R+++P L
Sbjct: 100 SAYITFIMFEAAYFCEIMRAGIQSISKGQVNAAYALGLSYAQAMRLVVLPQAFRNMLPIL 159

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L ++ SL   +   D V     I  +  + +E+ L    +Y  LS  ++  + +
Sbjct: 160 LTQTIVLFQDVSLVSLLNVTDFVGASVKIAQRDSRVVEMYLFVAIVYFVLSFALSSMVKQ 219

Query: 388 LNAKIAL 394
           L  +IA+
Sbjct: 220 LQKRIAI 226



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L  +  I   + GTL+   RLS+ K +A++   YV + R+IP L+VIF+ 
Sbjct: 16  LLSGLKYTLQLTLTAAIGGVLFGTLLALARLSSFKSLAFLAAAYVNLMRSIPLLLVIFWF 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|89899055|ref|YP_521526.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343792|gb|ABD67995.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 216

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 61/94 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  +ALS   A FI+EIV SG+ AVP GQ+EAA + GLT  +  RLV++PQA R I+
Sbjct: 90  SFTAGALALSNIAACFISEIVASGIRAVPIGQVEAAASAGLTRLQQLRLVVMPQATRMIV 149

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           P L  Q++ L+K+SS+  A+G  DL   G  I+ 
Sbjct: 150 PSLVGQFVLLVKDSSVVSAIGLLDLTRSGWIIVQ 183



 Score = 43.9 bits (102), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           + Y   IL G   T  L+F G++  T+IG ++G GR S++KL++ +   Y ++FR  P
Sbjct: 12  AQYYPVILKGIGVTLALSFIGIVAGTLIGFVLGIGRASSHKLLSLVVGAYTDIFRGTP 69


>gi|226224893|ref|YP_002759000.1| amino acid ABC-transporter (permease) [Listeria monocytogenes
           Clip81459]
 gi|225877355|emb|CAS06069.1| Putative amino acid ABC-transporter (permease) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 238

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 24/211 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +       L  +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVLLSL-----PRIYKIPVLDQLVRVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL+ 
Sbjct: 83  LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y+SLSI+  L    L       EK+
Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222


>gi|125624757|ref|YP_001033240.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|124493565|emb|CAL98550.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|300071557|gb|ADJ60957.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris NZ9000]
          Length = 228

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + A++AEIVR+G+ AVP GQ EAA +LG+  R+A   V+LPQA+R+I+P + ++
Sbjct: 101 IVISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMTTVILPQALRNILPAVGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386
           ++ ++K+SSL   +G  ++ +   T+ N T Q I     + L +  +   +S ++ LF  
Sbjct: 161 FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMIFVALYYFVVTFVVSRLLVLFEK 220

Query: 387 RLNAKIA 393
           +L    A
Sbjct: 221 KLGKGYA 227


>gi|326773223|ref|ZP_08232506.1| ABC-type amino acid transport system, permease component
           [Actinomyces viscosus C505]
 gi|326636453|gb|EGE37356.1| ABC-type amino acid transport system, permease component
           [Actinomyces viscosus C505]
          Length = 321

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 82/136 (60%), Gaps = 4/136 (2%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +TV   F++  + L     A+++EIVRSGL +V +GQ EAA ALG++  +  R ++LPQA
Sbjct: 148 TTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEAAGALGMSRGQILRRIVLPQA 207

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL---IWMFIYL 375
           MR I+PP  ++ +++LK +SL +AV F  DL  V  +  + T Q I ++L   IW  I  
Sbjct: 208 MRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNSYASLTYQIIPLLLVAAIWYIIIT 267

Query: 376 SLSIMIALFMNRLNAK 391
           S+ ++   ++ R   K
Sbjct: 268 SILMVGQHYIERYYGK 283


>gi|218191223|gb|EEC73650.1| hypothetical protein OsI_08176 [Oryza sativa Indica Group]
          Length = 449

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 320 FTAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSRRETIRYVIMPLALRRMLP 379

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 380 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVL 439

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 440 RRLERRMKI 448


>gi|262278837|ref|ZP_06056622.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259188|gb|EEY77921.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus
           RUH2202]
          Length = 225

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 8/166 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P   LI + +  +F  P +  F F   +   P F S+ +  + + AAF +EIVRSG+ 
Sbjct: 64  GIP---LIQVIFIFYFLLPKI--FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQ 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ RGQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +   D +
Sbjct: 118 SISRGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFL 177

Query: 351 SVGGTIINQTGQAIE--IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               T+ N  G   +    LI   +Y   S +++  + RL  KIA+
Sbjct: 178 GRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQQKIAI 223



 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS+N + +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMLGGILIGTPLAMMRLSSNAIASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LY 149
            Y
Sbjct: 74  FY 75


>gi|229104758|ref|ZP_04235419.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-28]
 gi|228678631|gb|EEL32847.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-28]
          Length = 225

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 79/129 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 93  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY +L I++ L
Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYTLVIILTL 212

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 213 VGKAIEGRM 221


>gi|30022233|ref|NP_833864.1| arginine ABC transporter permease [Bacillus cereus ATCC 14579]
 gi|218233478|ref|YP_002368956.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|296504643|ref|YP_003666343.1| arginine ABC transporter permease [Bacillus thuringiensis BMB171]
 gi|29897790|gb|AAP11065.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 14579]
 gi|218161435|gb|ACK61427.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|296325695|gb|ADH08623.1| arginine ABC transporter permease [Bacillus thuringiensis BMB171]
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 33  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 87  -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGVP 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 130 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 190 LLFVGLIYYMLVIILTLVGKAIEGRM 215


>gi|89073070|ref|ZP_01159617.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89051288|gb|EAR56744.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 365

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 60/83 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIVLPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317


>gi|229494745|ref|ZP_04388503.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodococcus erythropolis SK121]
 gi|229318412|gb|EEN84275.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodococcus erythropolis SK121]
          Length = 605

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 98/171 (57%), Gaps = 13/171 (7%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +  GLP +V+I +          LG    + G T S  +     ALS   +A+I EI 
Sbjct: 421 TDIFRGLPAVVIILIIG--------LGVGPIVKGITGSNPYWLGVAALSLLASAYIGEIF 472

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V  GQ+EA+ ALG ++RK+  LV++PQ +R ++P L +Q+++L+K+SSL   +G
Sbjct: 473 RSGIQSVESGQLEASRALGFSYRKSMSLVVIPQGVRRVLPALMNQFISLIKDSSLIYFLG 532

Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 +L +VG  +  QTG    ++   +F YL+L+I +   +N ++ ++
Sbjct: 533 LLVTQRELFAVGRDLNAQTGSLSPLVAAGLF-YLALTIPLTHLVNYIDNRL 582



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G  NT  LA +  I  TI+G L+    +S  + + W  RVY ++FR +P +V+I  +  
Sbjct: 379 TGLPNTLILALASGIIGTILGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILIIG- 437

Query: 151 SVLSVLPI 158
             L V PI
Sbjct: 438 --LGVGPI 443


>gi|227889073|ref|ZP_04006878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227850302|gb|EEJ60388.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 537

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 76/122 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S  T A++AE++R G+ A P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 389 VIVSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQAIRNSLPSITNE 448

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG T+ +QT +  +   I   IYL L+  I    N +  
Sbjct: 449 FIVNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILTFSITRVFNFIER 508

Query: 391 KI 392
           K+
Sbjct: 509 KL 510



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVG----------AGRLSANKLVAWICRVYVE 134
           Y + IL G   T  LA  G I    IG LVG           G+    K+V W+  VY+E
Sbjct: 296 YGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYIE 355

Query: 135 VFRNIPPLVVIFFLY 149
           VFR  P +V    +Y
Sbjct: 356 VFRGTPMMVQAAVIY 370


>gi|157963212|ref|YP_001503246.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           pealeana ATCC 700345]
 gi|157848212|gb|ABV88711.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella pealeana ATCC 700345]
          Length = 226

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 77/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQMEAA +LGL+H +  + V+LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQMEAARSLGLSHGQTMKEVILPQAIKNILPSLGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK +++   +G  DL+  G  I ++T +    +     IYL L+ +    ++R   
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLLLTYIFTFMLSRFET 220

Query: 391 KI 392
           ++
Sbjct: 221 RL 222


>gi|229075860|ref|ZP_04208836.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock4-18]
 gi|229098623|ref|ZP_04229563.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-29]
 gi|229117649|ref|ZP_04247020.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock1-3]
 gi|228665828|gb|EEL21299.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock1-3]
 gi|228684702|gb|EEL38640.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-29]
 gi|228707175|gb|EEL59372.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock4-18]
          Length = 225

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 79/129 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 93  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY +L I++ L
Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYTLVIILTL 212

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 213 VGKAIEGRM 221


>gi|227894269|ref|ZP_04012074.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863912|gb|EEJ71333.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 526

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 76/122 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 380 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 439

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  
Sbjct: 440 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEK 499

Query: 391 KI 392
           K+
Sbjct: 500 KL 501



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E  +     T+   Y   I+ G   T  LA  G I    IG LVG           
Sbjct: 269 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 328

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A   V W+  VYVE+FR  P +V    +Y
Sbjct: 329 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 361


>gi|117620816|ref|YP_857214.1| L-cystine ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117562223|gb|ABK39171.1| L-cystine ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 225

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 14/204 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +FVLGIVL L +  L+R +       L   Y+  +LI G P LV + L +          
Sbjct: 30  TFVLGIVLGL-SVALARLYGPAPLVMLVRFYV--WLIRGTPLLVQLFLIF---------- 76

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            +       V   F +  I  +    A+ +EI+R+ L A+P+GQ EAA ++G+   +   
Sbjct: 77  -YGLPSAGIVLDAFTAAVIGFTLNIGAYSSEIIRATLAAIPKGQWEAAYSIGMNWPQVMW 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA R  +PPL++ +++L+K++SLA AV   +L      + + T + + + +    
Sbjct: 136 RVILPQAARIAVPPLSNTFISLVKDTSLAAAVTVPELFQAAQRLASVTYEPLILYVETAL 195

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           IYL  S +++   ++L  ++A KE
Sbjct: 196 IYLLFSSVLSTLQDKLEQRLAHKE 219


>gi|15599388|ref|NP_252882.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9950403|gb|AAG07580.1|AE004835_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 234

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 81/133 (60%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++ G+P L++I   Y   F   + GQ         + +F ++ +AL  + A ++AEIVR
Sbjct: 68  FVVRGVPLLMVIFWAY--FFLPTLTGQ--------RTDQFTTMLLALVLFDAVYLAEIVR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  + RGQ EAA +LGL +  + RLV+LPQA+R+++P L +Q+++ +K +SL   +G 
Sbjct: 118 AGIQGLDRGQFEAARSLGLGYLASMRLVVLPQALRNMLPSLVNQFVSTIKETSLGYIIGL 177

Query: 347 ADLVSVGGTIINQ 359
           A++  +   I  Q
Sbjct: 178 AEVSFIASQINTQ 190


>gi|323490820|ref|ZP_08096021.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
 gi|323395532|gb|EGA88377.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 27/202 (13%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDKPVL 251
           +LG +L+LF          K G   PL + +   T +  G P ++ + + Y   F  P L
Sbjct: 35  ILGTLLALF----------KIGSIKPLRWFADAYTSIFRGTPLILQLMIIY---FSTPQL 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             ++          F+S  +A    ++A+I+EI+R+G+ AV +GQMEAA ALG+ +R   
Sbjct: 82  TGYDI-------SAFLSAILAFGLNSSAYISEIIRAGIQAVDKGQMEAAQALGVPYRAMM 134

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           + ++LPQA+++I+P L ++++ L K S++   +G+ DL+     +     +  E +L   
Sbjct: 135 KDIILPQALKNILPALMNEFITLTKESAIVSTIGYLDLMRRAQVVGADLFRNFEPLLFVG 194

Query: 372 FIY----LSLSIMIALFMNRLN 389
           FIY    + L+++  +F  RL 
Sbjct: 195 FIYWCLVMGLTMIGRVFERRLK 216


>gi|317046630|ref|YP_004114278.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948247|gb|ADU67722.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 231

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 67/106 (63%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           + ++ EF+   +AL    AA+ +E +RSGL A+P GQ EAA ALG+ + +A   V+LPQ 
Sbjct: 93  NDLNAEFLFSLVALGLCQAAYFSEDIRSGLRAIPDGQNEAARALGMGYVRAMWSVILPQG 152

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +R+ +P L +  + L KN+SLA+ +G A+L  V   I NQT +  E
Sbjct: 153 IRNALPALINHTVLLFKNTSLAMVIGVAELTYVTRDIENQTFRTFE 198


>gi|153835217|ref|ZP_01987884.1| general L-amino acid transport system permease protein AapM [Vibrio
           harveyi HY01]
 gi|148868283|gb|EDL67415.1| general L-amino acid transport system permease protein AapM [Vibrio
           harveyi HY01]
          Length = 365

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|322833086|ref|YP_004213113.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168287|gb|ADW73986.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 222

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS  T+A++AEI R+ + +V +GQ+EA++A GL+  KA+  +L PQA R+ IP   + 
Sbjct: 95  LGLSLNTSAYLAEIFRAAIDSVDKGQLEASLASGLSMFKASSRILFPQACRNAIPATGNV 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Y+ L+KNSSLA  +G ++L++ G  +  ++ +  E       +Y +L+I+ +    RL 
Sbjct: 155 YIGLIKNSSLAFTLGVSELLAAGKMVATESLKFFEAYFAVALVYWALTIIFSELQRRLE 213


>gi|121534020|ref|ZP_01665846.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermosinus carboxydivorans Nor1]
 gi|121307531|gb|EAX48447.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermosinus carboxydivorans Nor1]
          Length = 217

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A     AA+ AEI R+G+ ++ RGQ EAA ALG+T+ +  R ++LPQ ++ +
Sbjct: 85  PDFPAAVVAFVLNYAAYFAEIFRAGIQSIDRGQYEAAKALGMTYVQTMRRIILPQVVKRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   DL+    +I+ +       I+  +F YL +++++  
Sbjct: 145 LPPVSNETITLVKDTSLIYVLAMNDLLRTARSIVQRDFNTTAFIVAAVF-YLVMTLVLTW 203

Query: 384 FMNRLNAKIALKEK 397
              +L  + A+ ++
Sbjct: 204 LFQKLEQRYAVYDE 217


>gi|91227963|ref|ZP_01262073.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91188284|gb|EAS74582.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 365

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  + +A++AE+VR GL A+P+GQ EAA ALGL++ K T L++
Sbjct: 220 FMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKIAIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317



 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           G + T  +A  G++ +  IG ++  GR S   ++  IC VY+EV+R +P + V+F
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLF 211


>gi|295102408|emb|CBK99953.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Faecalibacterium prausnitzii L2-6]
          Length = 254

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 104/195 (53%), Gaps = 20/195 (10%)

Query: 210 HFHEKTGKALPLL-------YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           H  ++ G++ P+L        + T +I G P +V + +   + F+      F  +G    
Sbjct: 73  HDQQRPGRSNPVLGGFNAVCQVYTTVIRGTPMMVQLLIMSMVIFNNSR--NFTMVGA--- 127

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                   +AL   + A+++EI+R GL+AV  GQMEA  +LGL +     ++++PQA+R+
Sbjct: 128 --------LALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYITTMVVIIIPQAIRA 179

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P L ++++ LLK++SL   +G  +L+     I+N+T +A+  +     IYL L ++  
Sbjct: 180 VLPALGNEFIMLLKDTSLITVIGGKELLYAAQGIMNRTYEAMFPLFGVALIYLVLVMIFT 239

Query: 383 LFMNRLNAKIALKEK 397
             + +   ++A  ++
Sbjct: 240 WLLAKFERRLAQSDR 254


>gi|229047847|ref|ZP_04193426.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH676]
 gi|229111627|ref|ZP_04241178.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock1-15]
 gi|229146727|ref|ZP_04275093.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST24]
 gi|228636747|gb|EEK93211.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST24]
 gi|228672009|gb|EEL27302.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock1-15]
 gi|228723508|gb|EEL74874.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH676]
          Length = 225

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 39  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 93  -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGVP 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221


>gi|145297674|ref|YP_001140515.1| ABC-type glutamine/glutamate transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850446|gb|ABO88767.1| ABC-type glutamine/glutamate transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 220

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 62/97 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L+ + A+ + E+VR GL ++ RGQ EA +ALGL+  +  R VLLPQA++ +
Sbjct: 88  PAFWCAVLVLALWGASEVGEVVRGGLGSLARGQQEAGLALGLSTWQLYRHVLLPQALQRL 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            PP  + Y  ++K SSLAV +G  +++ VG  II +T
Sbjct: 148 TPPTINIYTRIIKTSSLAVLIGVVEVIKVGQQIIERT 184


>gi|56478021|ref|YP_159610.1| glutamate/aspartate ABC transporter transmembrane protein
           [Aromatoleum aromaticum EbN1]
 gi|56314064|emb|CAI08709.1| putative ABC transporter protein,probable glutamate/aspartate
           transmembrane subunit [Aromatoleum aromaticum EbN1]
          Length = 226

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 73/127 (57%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S Y   + + AA+ +EI+RSG+ +VPRGQ+ A  A+G T+ +  RLV+LPQA R+++P L
Sbjct: 98  SAYFTFTVFEAAYYSEIMRSGIQSVPRGQVAAGYAMGFTYGQTMRLVVLPQAFRNMLPVL 157

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L ++ SL  A+G  D       I  +  + +E+      +Y  +   ++  +  
Sbjct: 158 LTQTIILFQDVSLVYAIGATDFFGAADKITQRDLRPVEMYTTVAVVYFVICFTLSRLVKL 217

Query: 388 LNAKIAL 394
           L ++IA+
Sbjct: 218 LQSRIAI 224


>gi|325970436|ref|YP_004246627.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta sp. Buddy]
 gi|324025674|gb|ADY12433.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 221

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 18/187 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FVF  VLGI         +R+  +     L  LYI +  +  +P L+ I L ++L     
Sbjct: 36  FVFGSVLGI---------ARYLGKGPAAKLAALYIDS--VRNIPLLLFI-LSFRLLLPSV 83

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +LG               S  +A++ +T+A +AEI+R GL  +P+GQ EAA + G +  K
Sbjct: 84  ILGI------RIPDKAVFSGIVAMTVFTSAMVAEILRGGLNGIPKGQWEAAASQGFSRYK 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++ PQA+R I+ P+  Q++  LK++S    VG ++L+     I+ +   + ++IL+
Sbjct: 138 TLRYIIFPQALRKILVPMLGQFVTCLKDTSFLQVVGISELMMNATIIMGKFKYSYQVILL 197

Query: 370 WMFIYLS 376
           +  + L+
Sbjct: 198 YTLVALA 204


>gi|293603255|ref|ZP_06685686.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
 gi|292818344|gb|EFF77394.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
          Length = 238

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 16/133 (12%)

Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +L+ GLP L+ I   Y    L   +PV G    +             +AL CY +A++AE
Sbjct: 66  YLVRGLPLLMFIFWAYFFVPLIIGRPVAGTTTMV-------------VALVCYESAYLAE 112

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ A+P GQ EA+ ALGL++ +  R V+LPQA+ +++P + SQ+++ +K +SLA  
Sbjct: 113 IIRAGIQALPPGQQEASRALGLSYMQTMRRVILPQALYNMLPSMLSQFVSTVKETSLAYV 172

Query: 344 VGFADLVSVGGTI 356
           +   +L      I
Sbjct: 173 ISVQELTYAANQI 185


>gi|229174829|ref|ZP_04302349.1| Arginine transport system permease protein artQ [Bacillus cereus
           MM3]
 gi|228608497|gb|EEK65799.1| Arginine transport system permease protein artQ [Bacillus cereus
           MM3]
          Length = 225

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 39  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 93  -----------------PAFVAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIP 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 136 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 196 LLFVGLIYYMLVIILTLVGKAIEGRM 221


>gi|327461007|gb|EGF07340.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 226

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 8/118 (6%)

Query: 243 QLHFDKPVLGQF-------NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + + + P+L QF         +   T+ P  + +  + +  Y  A+I+E++RSG+ ++PR
Sbjct: 63  EFYQNTPLLVQFVIVFYGLPLVSNYTIMPSIYWTAVLCVGLYHGAYISEVIRSGIQSIPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           GQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S    +   DL+ V
Sbjct: 123 GQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVAIISGMDLMFV 180


>gi|319651467|ref|ZP_08005595.1| YqiY protein [Bacillus sp. 2_A_57_CT2]
 gi|317396782|gb|EFV77492.1| YqiY protein [Bacillus sp. 2_A_57_CT2]
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 17/184 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +  FVLGI+LS F  ++SR    K    +   Y S F   G P ++ + L   +++  P 
Sbjct: 31  ILGFVLGIILSFF--KISRF---KILGWIADAYTSVFR--GTPLVLQLML---IYYGSPQ 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L       G  + P   ++ ++    +AA+I+EI+R+G++AV +GQ EAA+ALG+ +R A
Sbjct: 81  LI------GYKIDPSTAAV-LSFGLNSAAYISEIIRAGILAVDKGQSEAAMALGVPYRPA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQAM++I+P L ++++ L K S++   +G  D++     +  +     E ILI 
Sbjct: 134 MMDIILPQAMKNILPALMNEFITLTKESAIVTVIGVTDVMRRAYIVGGEKFSYFEPILIA 193

Query: 371 MFIY 374
             IY
Sbjct: 194 GLIY 197


>gi|228960421|ref|ZP_04122073.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229129433|ref|ZP_04258404.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-Cer4]
 gi|228654038|gb|EEL09905.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-Cer4]
 gi|228799282|gb|EEM46247.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 222

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 36  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 89

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ 
Sbjct: 90  -----------------PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGVP 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 133 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 192

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 193 LLFVGLIYYMLVIILTLVGKAIEGRM 218


>gi|156974645|ref|YP_001445552.1| hypothetical protein VIBHAR_02363 [Vibrio harveyi ATCC BAA-1116]
 gi|156526239|gb|ABU71325.1| hypothetical protein VIBHAR_02363 [Vibrio harveyi ATCC BAA-1116]
          Length = 365

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|1649036|gb|AAB49428.1| glutamine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhimurium]
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%)

Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            AK+ ++  VLG+   L    A   +R F       + L++I   +I G P +V +   Y
Sbjct: 18  GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIE--IIRGTPMVVQVMFIY 75

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +A
Sbjct: 76  ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 126

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +
Sbjct: 127 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+EI       YL ++++++  + RL  ++ +
Sbjct: 187 ALEIWSAVAVFYLIITLVLSFILRRLEKRMKI 218


>gi|89902568|ref|YP_525039.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89347305|gb|ABD71508.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 255

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 78/133 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IAL+    A+I+EI R+G+ ++ RGQ+EA+ +LGL+  +    V+LPQA R ++P
Sbjct: 123 FLSGVIALTLNAGAYISEIFRAGIQSIDRGQVEASRSLGLSFPRTMFHVVLPQAFRRMLP 182

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  ++LLK+SSL  A+G A+L     T+     +  E  L    +Y  L++ +A  +
Sbjct: 183 PLGNNAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYVV 242

Query: 386 NRLNAKIALKEKK 398
             L A+    + +
Sbjct: 243 KNLEARYGRGDTR 255


>gi|312868069|ref|ZP_07728273.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096473|gb|EFQ54713.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 230

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 32/234 (13%)

Query: 179 PTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST---------- 226
           PTL     A   + V + VLG    L  T  ++   +K G  L   Y+ T          
Sbjct: 14  PTLVQALPATLALMVLTTVLGSAFGLVLT-WAQVSEDKVGAGLAKGYVFTLRCTPPIVLL 72

Query: 227 FLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           FL+F GLP      L + L  D     +F F+             +A+    AA I+E+ 
Sbjct: 73  FLVFYGLPQF----LNWWLGIDIDHWSKFVFV------------LVAMFLLFAAMISEVF 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           ++  +A+P+GQMEA +++GLT  +    ++LPQA R  +P +T+  LNL+++++LA  +G
Sbjct: 117 KAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYTIG 176

Query: 346 FADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           F D++  G  +I  N    ++E       IY  ++++I+     L  ++++ E+
Sbjct: 177 FIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIALVISFSAQLLEKRLSVTER 230


>gi|228474812|ref|ZP_04059543.1| L-cystine transport system permease protein TcyB [Staphylococcus
           hominis SK119]
 gi|228271475|gb|EEK12843.1| L-cystine transport system permease protein TcyB [Staphylococcus
           hominis SK119]
          Length = 239

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 94/155 (60%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITIVTFILGLIIALF-TALMRISSSKVLRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    N     T+S   +S  I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLITGNADEQWTLS-SVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +R+  + ++LPQA+R  +P L + +L L+K++SL
Sbjct: 147 NYRQTIQRIILPQAIRVSVPALGNTFLGLIKDTSL 181


>gi|262041102|ref|ZP_06014320.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041552|gb|EEW42605.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 199

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++P
Sbjct: 70  FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLP 129

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 130 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFIL 189

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 190 RRLERRMKI 198


>gi|297567747|ref|YP_003686718.1| hypothetical protein Mesil_3399 [Meiothermus silvanus DSM 9946]
 gi|296852196|gb|ADH65210.1| hypothetical protein Mesil_3399 [Meiothermus silvanus DSM 9946]
          Length = 363

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 3/118 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+ +   +  + + AA++AE VR GL AVP+GQ EAA ALGL        V+LPQA+R++
Sbjct: 227 PQVLRAIVGFTLFAAAYLAENVRGGLQAVPQGQREAAYALGLNGFHTAYYVVLPQALRAV 286

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLS 378
           IP +  Q++ L K++SL V +G  DL+ +   ++       +  E+ L    +YL++S
Sbjct: 287 IPAIVGQFIALFKDTSLVVLIGLLDLLGMAQAVLANPLYLHREREVYLFLALVYLAVS 344


>gi|117164571|emb|CAJ88117.1| putative ABC transporter permease [Streptomyces ambofaciens ATCC
           23877]
          Length = 334

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 24/202 (11%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + V  F+LG VL++   RLS +   +T     L +   ++    P LV +   + +    
Sbjct: 88  VMVLGFLLGTVLAVM--RLSGNPVLRT-----LSWGYVWIFRSTPLLVQLLFWFNIGALY 140

Query: 249 PVLGQFNFIGGSTVSPEFMSLY------------IALSCYTAAFIAEIVRSGLIAVPRGQ 296
           P LG      G    PEF+S+             I L+ +  A+ AE+VR G+++V  GQ
Sbjct: 141 PTLGL-----GIPFGPEFVSVKTVNLLGPTLTAVIGLTLHETAYAAEVVRGGILSVDPGQ 195

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALGL+ R+  R V++PQAMRSI+P   +  +  LK +S+   +   DL+     I
Sbjct: 196 TEAAQALGLSRRRTLRRVVIPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLI 255

Query: 357 INQTGQAIEIILIWMFIYLSLS 378
            NQT Q I ++++    Y++++
Sbjct: 256 YNQTYQVIPLLMVATLWYIAVT 277


>gi|51891626|ref|YP_074317.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855315|dbj|BAD39473.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 62/99 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++ +TAA + EIVR GL +V +GQ EAA + G T  +  + ++LPQA+R +IPPLT Q
Sbjct: 90  LAMTLFTAAIVGEIVRGGLNSVDKGQWEAARSQGFTWWQTMQHIVLPQALRKMIPPLTGQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           ++ ++K++S     G  +L   G  I+ + G  ++   I
Sbjct: 150 FITVVKDTSYVWVTGVQELTGKGVIILGKHGSTVQFFAI 188


>gi|323498375|ref|ZP_08103375.1| hypothetical protein VISI1226_13938 [Vibrio sinaloensis DSM 21326]
 gi|323316617|gb|EGA69628.1| hypothetical protein VISI1226_13938 [Vibrio sinaloensis DSM 21326]
          Length = 365

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|225174438|ref|ZP_03728437.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
 gi|225170223|gb|EEG79018.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 110/200 (55%), Gaps = 17/200 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            FVLGI+  L   R+S++   K   AL   Y+   +I G P LV I   + ++F  P+L 
Sbjct: 35  GFVLGILFGL--GRISKN---KIIFALSTTYVE--IIRGTPILVQI---FFIYFAMPIL- 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               +G    +    +   A++  + A++AEIVR G+ ++ +GQ EA   +G+T  +  R
Sbjct: 84  ----LGSRISN--ITAAIAAIAINSGAYLAEIVRGGIQSIDKGQTEAGRTIGMTPFQTMR 137

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ PQA + IIPP+ +Q++  LK++SL   +  ADL   G TII    +++EI      
Sbjct: 138 YIIWPQAFKRIIPPMGNQFIISLKDTSLLSVIAVADLTRRGQTIIAVNYRSVEIWGTVAL 197

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           +YL++++ I+  + R+  ++
Sbjct: 198 LYLTMTLTISFVLRRMERRL 217



 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +   G+    ++G L G GR+S NK++  +   YVE+ R  P LV IFF
Sbjct: 16  ALLQGMWMTIMITVGGVALGFVLGILFGLGRISKNKIIFALSTTYVEIIRGTPILVQIFF 75

Query: 148 LY 149
           +Y
Sbjct: 76  IY 77


>gi|227875260|ref|ZP_03993402.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus mulieris ATCC 35243]
 gi|269978149|ref|ZP_06185099.1| probable amino-acid ABC transporter permease protein [Mobiluncus
           mulieris 28-1]
 gi|227844165|gb|EEJ54332.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus mulieris ATCC 35243]
 gi|269933658|gb|EEZ90242.1| probable amino-acid ABC transporter permease protein [Mobiluncus
           mulieris 28-1]
          Length = 217

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 81/140 (57%), Gaps = 3/140 (2%)

Query: 256 FIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           ++ G  +S E  F ++ IA +   AA+ AEI R G  A+P GQ EAA  LG + R+    
Sbjct: 75  YLFGVQISAEYRFYAVIIAFAINYAAYFAEIYRGGFQAIPAGQSEAAFVLGYSQRRTFFT 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           + +PQ  R+++P +T++ + L+K++SLA A+ + ++ ++     + T      +   +F 
Sbjct: 135 IKVPQMFRTVLPSITNEVITLVKDTSLAFAISYTEMFTLAKQYASATASMAPFVAAAVFY 194

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           Y+  +I++A+ M+RL   ++
Sbjct: 195 YV-FNIVVAVLMDRLEKHVS 213


>gi|89094511|ref|ZP_01167450.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanospirillum sp. MED92]
 gi|89081247|gb|EAR60480.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanospirillum sp. MED92]
          Length = 244

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 12/156 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IA 272
           +ALP  YI  F   G P L+ I L Y          QF FI  S + P     Y    I 
Sbjct: 52  QALPFAYI--FFFRGTPLLIQIFLVYYGS------SQFEFIKNSALWPILREPYWCAIIT 103

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            + +TAA+IAE++R  + ++P+G++EAA ALG+++    R ++LP+A   ++P   ++ +
Sbjct: 104 FALHTAAYIAELLRGAIQSIPKGEIEAAKALGMSYPMMLRRIILPRAFGIMMPAYGNEVI 163

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            +LK S+LA  +   DL  +  TII +T   +EI L
Sbjct: 164 LMLKGSALASTITLLDLTGMARTIIARTYTPLEIFL 199


>gi|323495725|ref|ZP_08100795.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326]
 gi|323319192|gb|EGA72133.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326]
          Length = 303

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 80/141 (56%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A++AEIVRSGL  + +GQ EAA +LGL+     R V+ P
Sbjct: 163 GPAALWENLLSGVLCIGILSSAYVAEIVRSGLNNIEKGQWEAADSLGLSLWVKYRYVIAP 222

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   ++  VG  I N +G   EI LI    YL++
Sbjct: 223 QVLATITPALAGQAISLVKDTSIVSLISIQEMTFVGTEIANSSGLIFEIWLIVGLTYLAV 282

Query: 378 SIMIALFMNRLNAKIALKEKK 398
            + ++LF  +L  +    ++K
Sbjct: 283 CLALSLFFRKLELRTLRHQRK 303


>gi|94986573|ref|YP_594506.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94730822|emb|CAJ54184.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 261

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 97/172 (56%), Gaps = 17/172 (9%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS-CYTAAFIAEIVR 286
           +I G+P LV      QL +    LG F        SP  +S  IA++ CY  A++ E+ R
Sbjct: 103 VIRGIPLLV------QLFYIYYALGHF--------SP-LVSAIIAITFCY-GAYMGEVFR 146

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++ VP+GQ EAA +LG    +  R V+LPQA+R+I+PP+ ++ + +LK++SL   +  
Sbjct: 147 AGILTVPKGQEEAARSLGFNKYQTMRYVILPQALRAILPPIGNECIAMLKDTSLISIIAV 206

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ADL+  G      T +  E   +   +YL ++++++  ++ +  K+   +++
Sbjct: 207 ADLLRRGREYAAVTFEYFETYTVIAIVYLIITLLLSKGVSIMEGKLDHYDQE 258



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF + F  +I    +G LVG GRLS N+++  +   YVEV R IP LV +F++Y +
Sbjct: 60  GIFVTFEVTFLSIICTLPLGLLVGFGRLSKNRIINILTSTYVEVIRGIPLLVQLFYIYYA 119

Query: 152 VLSVLPIPDHSIVLPF 167
           +    P+    I + F
Sbjct: 120 LGHFSPLVSAIIAITF 135


>gi|319940984|ref|ZP_08015321.1| hypothetical protein HMPREF9464_00540 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805557|gb|EFW02352.1| hypothetical protein HMPREF9464_00540 [Sutterella wadsworthensis
           3_1_45B]
          Length = 252

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 78/126 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  + A++ EI R+G+ ++ +GQMEAA +LG+++ +A R ++LPQA R ++P L +  
Sbjct: 123 AITLNSGAYMCEIFRAGIQSLDKGQMEAARSLGMSYMQAMRTIILPQAFRRMLPALGNNA 182

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK+SSL  A+G A+L     T+   + +  E  +    +Y  +++++A  + RL A+
Sbjct: 183 IAILKDSSLISAIGLAELAYAARTVAGASARYWEPYITISCVYWVMTLLLAWGIRRLEAR 242

Query: 392 IALKEK 397
           +   + 
Sbjct: 243 LGRGDN 248


>gi|6685719|sp|P72296|OCCM_RHIME RecName: Full=Octopine transport system permease protein occM
 gi|1519473|gb|AAB07519.1| OccM [Sinorhizobium meliloti]
          Length = 245

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 111/204 (54%), Gaps = 23/204 (11%)

Query: 188 KIFVFSFVLGIVL--SLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKY 242
           K+ VFS  +G VL  SL   R+SR +         L + + F IF   G P LV I   Y
Sbjct: 24  KLAVFSIAVGTVLAFSLALMRVSRRWW--------LDFPARFYIFAFRGTPLLVQI---Y 72

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +++    L QF  +  S + P     Y     AL+  TAA+ AEI+R GL++VP GQ+E
Sbjct: 73  IIYYG---LSQFPGLRHSLLWPFLREAYWCALGALALNTAAYSAEIMRGGLLSVPAGQIE 129

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A G+      R +++PQA+R ++P  +++ + ++K++SLA  +   ++  +   +I+
Sbjct: 130 AARACGMARVLLFRRIIIPQAIRQMLPGYSNEVVLMVKSTSLASTITLMEITGIAAKLIS 189

Query: 359 QTGQAIEIILIWMFIYLSLSIMIA 382
           +T + +E+      IYL+++ + A
Sbjct: 190 ETYRPVEVFACAGAIYLTMNFIAA 213


>gi|116619006|ref|YP_819377.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116097853|gb|ABJ63004.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 219

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 35/209 (16%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           + SF+ G ++ +       +F +  G      + LPLL I  F+ F LP       K  +
Sbjct: 34  ILSFIAGSIIGIVQFERIPYFSKFVGTINNIIRNLPLLLIIFFVYFALP-------KLGI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H                  P F +  +A+S + ++ +AEIVR GL ++  GQ E A A G
Sbjct: 87  HL-----------------PIFWATVVAMSTFESSMLAEIVRGGLESIDEGQFEGARANG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-- 362
           LT+ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  A++   G  I  Q     
Sbjct: 130 LTNIQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEMTYRGQIIYAQNSTYI 189

Query: 363 ---AIEIILIWMFIYLSLSIMIALFMNRL 388
               I I L++  +   LS++   F  RL
Sbjct: 190 IPVLIAITLVYFLLNYGLSLIAKWFDRRL 218


>gi|300871131|ref|YP_003786003.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brachyspira pilosicoli 95/1000]
 gi|300688831|gb|ADK31502.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Brachyspira pilosicoli 95/1000]
          Length = 205

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F S  I      AA++ EI R+G+ ++ +GQ EAA  L L +R+    ++LPQA+R +
Sbjct: 74  PAFTSAAITFVLNYAAYLMEIFRAGIESIDKGQYEAAYVLNLNYRQIMTRIILPQAIRKV 133

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL+++ +NL+K++SL + +G  DL+     ++ +  + I  ++  + IYL  + +I +
Sbjct: 134 LPPLSNEAINLIKDTSLVIVLGIGDLMLYARQVLTRDFKLIPFVIAGI-IYLLFTFVIVV 192

Query: 384 FMNRLNAKIALKE 396
               L  K  ++ 
Sbjct: 193 LFRNLEKKYVIRS 205


>gi|121606345|ref|YP_983674.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120595314|gb|ABM38753.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 222

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 81/136 (59%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E +S  I    + AA+ +EIVR+G+ ++ RGQ+ A  ALG+T+ +  +L++LPQ
Sbjct: 86  GRPIGAE-LSATITFVAFEAAYFSEIVRAGIQSISRGQVNAGRALGMTYAQNMKLIILPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  DL+    T     G+  E  L+   +Y  L 
Sbjct: 145 AFRNMVPVLLTQTIILFQDTSLVYAIGAYDLLKGFTTAGKIYGRPEEAYLLAAVVYFVLC 204

Query: 379 IMIALFMNRLNAKIAL 394
             ++  + RLN++IA+
Sbjct: 205 YSLSYMVKRLNSRIAI 220


>gi|269104575|ref|ZP_06157271.1| putative amino acid ABC transporter permease protein
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268161215|gb|EEZ39712.1| putative amino acid ABC transporter permease protein
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 319

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 74/121 (61%), Gaps = 4/121 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +    +A+IAEI+RSG+ ++ +GQ EAA +LGLT  +  R V+ PQA  S+IPPL  Q
Sbjct: 190 ICIGLLASAYIAEIIRSGIDSIEKGQWEAADSLGLTPLQRFRYVIFPQAFASVIPPLAGQ 249

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMN 386
           +++++K+SS+   +   +L  VG  I N +G   EI     L ++ + LSLSI+ +    
Sbjct: 250 FISIVKDSSIISLISIQELTFVGSEIANSSGYIFEIWILVGLAYLVLCLSLSILFSYLEK 309

Query: 387 R 387
           R
Sbjct: 310 R 310


>gi|49083678|gb|AAT51101.1| PA5075 [synthetic construct]
          Length = 321

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 23/178 (12%)

Query: 193 SFVLGIVLSLFA--TRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           S  +G+ + L A   RLS++   H+     L  +Y+   L+ G P LV I + Y   F  
Sbjct: 132 SGAIGLAIGLVAGLCRLSKNPTLHD-----LSTIYVE--LVRGTPLLVQIFIFY--FFIG 182

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            VL          +S EF  +  AL+ +T A++AEI+R+G+ ++ RGQ EAA +LGL   
Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAG 232

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI
Sbjct: 233 QSMRYVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 2/101 (1%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF-SGMIPAT 108
            + EK  +++    L    G ++ +G     +    A  +L G   T WL+  SG I   
Sbjct: 79  ESGEKQVVTVAQDSLQFSEGDDVAEGDAVGVTRHWAAGPLLWGLWTTLWLSLVSGAI-GL 137

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            IG + G  RLS N  +  +  +YVE+ R  P LV IF  Y
Sbjct: 138 AIGLVAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIFY 178


>gi|257455729|ref|ZP_05620957.1| octopine transport system permease protein OccM [Enhydrobacter
           aerosaccus SK60]
 gi|257446857|gb|EEV21872.1| octopine transport system permease protein OccM [Enhydrobacter
           aerosaccus SK60]
          Length = 241

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 110/206 (53%), Gaps = 8/206 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHF 246
           ++ V S +LG +L++    L+R   +   +ALP  YI  F   G P LV I L  Y L  
Sbjct: 24  ELVVLSGLLGFMLAV-PLALARLSKKPWVQALPFAYI--FFFRGTPLLVQIFLIYYGLSQ 80

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            K V     +  G   SP F    IA +  TAA+ AEI+R  + ++P+G+ EAA A+G++
Sbjct: 81  FKWVTESVLWKSGVLASP-FWCAIIAFTLNTAAYTAEIIRGAIKSIPKGENEAADAIGMS 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R ++ P+A   ++P   ++ + +LK S+LA  +   D+  V  TI+++T    E+
Sbjct: 140 YSQKLRRIIFPRAFGIMLPAYGNEVIFMLKGSALASTITLMDITGVATTIMSKTYTVFEL 199

Query: 367 ILIWMFIYLSLS-IMIALFMNRLNAK 391
                 IYL LS ++I +F  RL  K
Sbjct: 200 FFASGIIYLLLSWLLIGMF--RLAEK 223


>gi|255521708|ref|ZP_05388945.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J1-175]
          Length = 429

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 24/193 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +       L  +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL+ 
Sbjct: 83  LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIM 380
                +Y+SLSI+
Sbjct: 197 -----VYISLSII 204



 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 50/79 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A++ EI+RSG+IAV  GQMEAA ++G TH +A R VLLPQA    +P  T+ 
Sbjct: 349 IALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNL 408

Query: 331 YLNLLKNSSLAVAVGFADL 349
            +  L  +S+A  V   ++
Sbjct: 409 CIGFLHTTSIAAIVAVPEI 427


>gi|218885964|ref|YP_002435285.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756918|gb|ACL07817.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 263

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 93/163 (57%), Gaps = 16/163 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV      QL +    LG+F  +      P+ ++  IALS    A++ E+ R+G+ 
Sbjct: 108 GIPLLV------QLFYIYYALGRFLKV------PDLLAAIIALSVCYGAYMGEVFRAGID 155

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EAA +LG    +   +V+LPQA R+I+PP+ ++++ +LK++SL   +  AD++
Sbjct: 156 SISKGQTEAARSLGFNRAETMFMVILPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADIL 215

Query: 351 SVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389
             G    +++    E    + LI++ I L LS  +++  +RLN
Sbjct: 216 RRGREFASESFLYFETYTMVALIYLLITLFLSKGVSIMESRLN 258



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF +    ++ +  IG + G GRLS N+L+  +   YVEV R IP LV +F++Y +
Sbjct: 62  GIAVTFKVTVLSILCSIPIGLITGLGRLSRNRLINLVASTYVEVVRGIPLLVQLFYIYYA 121

Query: 152 VLSVLPIPD 160
           +   L +PD
Sbjct: 122 LGRFLKVPD 130


>gi|205375465|ref|ZP_03228253.1| amino acid ABC transporter ATP-binding protein [Bacillus
           coahuilensis m4-4]
          Length = 216

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 77/133 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
            +F S+ + L+ +  A+IAEI+R  + ++ +GQ EA  +LG++     R ++LPQA R  
Sbjct: 84  SDFWSVAMGLAFHNGAYIAEILRGSIQSIDKGQREAGRSLGMSQGLTMRRIILPQAFRRA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +Q++  LK+SSLA  +G  +L +V  T+ +     +  +LI    YL L  +   
Sbjct: 144 LPPLGNQFIIALKDSSLASFIGMYELFNVATTLGSNNFDNMTYLLIVSVYYLVLVYLFTF 203

Query: 384 FMNRLNAKIALKE 396
            + RL  ++++ +
Sbjct: 204 IVQRLEKRMSISD 216


>gi|313110114|ref|ZP_07796016.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
 gi|310882518|gb|EFQ41112.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
          Length = 320

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 15/174 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S  +G+ + L A  L R     T   L  +Y+   L+ G P LV I + Y   F   VL 
Sbjct: 132 SGAIGLAIGLVAG-LCRLSENPTLHDLSTIYVE--LVRGTPLLVQIFIFY--FFIGTVL- 185

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    +S EF  +  AL+ +T A++AEI+R+G+ ++ RGQ EAA +LGL   ++ R
Sbjct: 186 --------NLSREFAGV-AALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAGQSMR 236

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI
Sbjct: 237 YVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 2/98 (2%)

Query: 53  EKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF-SGMIPATIIG 111
           EK  +++    L    G ++ +G     +    A  +L G   T WL+  SG I    IG
Sbjct: 82  EKQVVTVAQDSLQFSEGDDVAEGDAVGVTRHWAAGPLLWGLWTTLWLSLVSGAI-GLAIG 140

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            + G  RLS N  +  +  +YVE+ R  P LV IF  Y
Sbjct: 141 LVAGLCRLSENPTLHDLSTIYVELVRGTPLLVQIFIFY 178


>gi|157362892|ref|YP_001469659.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157313496|gb|ABV32595.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 222

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 83/157 (52%), Gaps = 8/157 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +H+  P+L        + +   F S  I  S  T A+I+EI+R GL ++  GQ EAA 
Sbjct: 72  YFVHYGLPIL--------NIMPTRFQSATITFSLNTGAYISEIIRGGLQSINIGQFEAAY 123

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+  +  RL++ PQ  R ++PPL SQ+  L+K++SLA  +   +L  +       T 
Sbjct: 124 SLGLSRFQTIRLIIFPQLFRIVLPPLVSQFSYLIKDTSLAAVLTIPELTYMARRAAATTY 183

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +E  +  M +Y ++  +++   N L   +   +++
Sbjct: 184 RPLESFIPPMLMYFAIYFILSFLSNTLEKHLQKNDQE 220


>gi|328464919|gb|EGF36207.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus MTCC 5463]
          Length = 537

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++
Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNE 450

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  
Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEK 510

Query: 391 KIALKE 396
           K+  K+
Sbjct: 511 KLEGKK 516



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E  +     T+   Y   I+ G   T  LA  G +    IG LVG           
Sbjct: 280 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTR 339

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A  +V W+  VYVE+FR  P +V    +Y
Sbjct: 340 GKRWALNVVKWLLSVYVEIFRGTPMMVQAAVIY 372


>gi|323358918|ref|YP_004225314.1| amino acid ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323275289|dbj|BAJ75434.1| ABC-type amino acid transport system, permease component
           [Microbacterium testaceum StLB037]
          Length = 221

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 36/211 (17%)

Query: 193 SFVLGIVLSLFAT--RLSRH--------FHEKTGKALPLLYISTFLIF-GLPTLVLIALK 241
           SF +G+V++LF    RLSR+        F+    +  PLL +  F+IF GLPT+      
Sbjct: 30  SFAIGLVIALFMALLRLSRNVVLSGIARFYISIIRGTPLL-VQLFVIFYGLPTI------ 82

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                            G T+ P F +  IA S     + AE++R+ +++VPRGQ EAA 
Sbjct: 83  -----------------GVTIDP-FPAAVIAFSLNVGGYAAEVIRAAILSVPRGQWEAAH 124

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +GLT  K    ++LPQA R  +PPL++ +++L+K+SSLA  +  ++L      I   + 
Sbjct: 125 TVGLTPTKTLTRIILPQAARVSVPPLSNTFISLVKDSSLASLILVSELFRQAQNIAAFSY 184

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + + + L    IY    ++++   N L  ++
Sbjct: 185 EFMAVYLEAALIYWLFCLVLSFGQNALEKRL 215


>gi|13473260|ref|NP_104827.1| glutamine ABC transporter (integral membrane protein)
           [Mesorhizobium loti MAFF303099]
 gi|14024008|dbj|BAB50613.1| glutamine ABC transporter (integral membrane protein)
           [Mesorhizobium loti MAFF303099]
          Length = 216

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 24/198 (12%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G+V      R +      T + +P+L +  F+ +GLP +        LH          
Sbjct: 39  VGLVYGPAPLRWAVRIFSDTIRGIPILVLMFFVYYGLPAI-------GLHL--------- 82

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                   P F +  +AL+ +  A + E +R  + ++P+GQ EAA+A+GLT R+    V+
Sbjct: 83  --------PSFWAAVLALTLFKTAQVIEYLRGAVASIPKGQSEAAMAIGLTFRQRLTFVI 134

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQA R  +PP  +   + +K S+L   +G  DL+     +I +T +A+ + ++   IY 
Sbjct: 135 FPQAFRRFLPPWINGVTDAVKGSALVSLLGITDLMQAINQVIGRTYEAMPLYILGALIYF 194

Query: 376 SLSIMIALFMNRLNAKIA 393
           +++  ++L   RL  + A
Sbjct: 195 AVNYALSLASRRLERRFA 212



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 32/58 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF  T W++   +  + + G L+G G +     + W  R++ +  R IP LV++FF+Y
Sbjct: 15  GFAVTLWVSLLVVTLSLVAGVLLGVGLVYGPAPLRWAVRIFSDTIRGIPILVLMFFVY 72


>gi|217963554|ref|YP_002349232.1| L-cystine transport system permease protein TcyL [Listeria
           monocytogenes HCC23]
 gi|290893635|ref|ZP_06556617.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|217332824|gb|ACK38618.1| L-cystine transport system permease protein TcyL [Listeria
           monocytogenes HCC23]
 gi|290556837|gb|EFD90369.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|307571870|emb|CAR85049.1| polar amino acid ABC transporter, permease protein [Listeria
           monocytogenes L99]
          Length = 238

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 24/211 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +       L  +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL  
Sbjct: 83  LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQTEAAYSVGLNG 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y+SLSI+  L    L       EK+
Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222


>gi|126652699|ref|ZP_01724860.1| hypothetical protein BB14905_23073 [Bacillus sp. B14905]
 gi|126590548|gb|EAZ84666.1| hypothetical protein BB14905_23073 [Bacillus sp. B14905]
          Length = 234

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 15/208 (7%)

Query: 179 PTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           PTL   +   A+I VFS + G+VL +    + +  +    K L  +YIS   I G P LV
Sbjct: 15  PTLLQYLPVTAEILVFSILFGMVLGIMLA-IPKLLNVAGLKQLITIYIS--FIRGTPILV 71

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVP 293
            + L +   +  P L +   I  + +     ++Y  +  YT   AA  AEI R+ ++ V 
Sbjct: 72  QLFLVF---YGVPALLKLIHIDVTRMD----AMYFVIITYTLSNAAAFAEIFRAAILTVD 124

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA ++GL+  +A   ++ PQA+R   P + +  ++ LK++SLA ++G  D+V  G
Sbjct: 125 RGQMEAAYSVGLSGPQAFLRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRG 184

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +I  T +A EI +    +Y ++ I++
Sbjct: 185 EALIASTTRAFEIYVALSIVYFAIVIIL 212


>gi|146310955|ref|YP_001176029.1| glutamine ABC transporter permease protein [Enterobacter sp. 638]
 gi|145317831|gb|ABP59978.1| L-glutamine ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 219

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V     G+++ L A   +R +       + L++I   +I G P +V +   Y   F  
Sbjct: 25  ISVLGLAGGLIIGLVAG-FARSYGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R
Sbjct: 79  PM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               +YL ++++++  + RL  ++ +
Sbjct: 193 AVAVVYLIITLLLSFVLRRLERRMKI 218


>gi|90578889|ref|ZP_01234699.1| putative ABC-type amino acid transport system, permease component
           [Vibrio angustum S14]
 gi|90439722|gb|EAS64903.1| putative ABC-type amino acid transport system, permease component
           [Vibrio angustum S14]
          Length = 365

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 58/78 (74%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++LPQA++  IP + + ++ L 
Sbjct: 240 FSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIVLPQALKITIPSIVNTFIGLF 299

Query: 336 KNSSLAVAVGFADLVSVG 353
           K++SL + +G  D++ +G
Sbjct: 300 KDTSLVLIIGMFDVLGIG 317


>gi|300716009|ref|YP_003740812.1| hypothetical protein EbC_14300 [Erwinia billingiae Eb661]
 gi|299061845|emb|CAX58961.1| uncharacterized protein [Erwinia billingiae Eb661]
          Length = 219

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 112/206 (54%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V   V G+++ L A   +R +     + + L++I   LI G P +V +   Y   F  
Sbjct: 25  ISVLGLVGGLIIGLVAG-FARAYGGWISRNIALVFIE--LIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   F  +    +S   +++ I     + A+IAEI R  ++++  G  EA +ALGL+ R
Sbjct: 79  PM--AFTDLRIDPLSAAVVTIMIN----SGAYIAEITRGAVLSIHNGFREAGLALGLSRR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               IYL +++M++  + R+  ++ +
Sbjct: 193 AVAVIYLFITLMLSFILRRIEKRMKI 218


>gi|152976559|ref|YP_001376076.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152025311|gb|ABS23081.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 219

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 79/129 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  IA S  + A+++E++R+G+ A+ +GQ EAAIALG+ + K  R ++LPQA+++I
Sbjct: 87  PAFLAAVIAFSLNSGAYMSEVIRAGIQAIDKGQTEAAIALGVPYGKMMRHIILPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    +Y  L I++ +
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLVYYILVIVLTV 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKAIEGRM 215


>gi|323492612|ref|ZP_08097756.1| hypothetical protein VIBR0546_00040 [Vibrio brasiliensis LMG 20546]
 gi|323312987|gb|EGA66107.1| hypothetical protein VIBR0546_00040 [Vibrio brasiliensis LMG 20546]
          Length = 365

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|260778550|ref|ZP_05887442.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604714|gb|EEX31009.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 365

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 220 FLAEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLIV 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|239944757|ref|ZP_04696694.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239991222|ref|ZP_04711886.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291448219|ref|ZP_06587609.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
 gi|291351166|gb|EFE78070.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
          Length = 215

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 74/113 (65%), Gaps = 2/113 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  YT++F+ E VRSG+  VP GQ EAA ++G+T  +  ++V+LPQA R++IPPL+S 
Sbjct: 90  LALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMTFAQTLQIVVLPQATRTVIPPLSSI 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIA 382
           ++ L KNS++A A   A+L      +++  G  I  + IW+ I YL ++  I+
Sbjct: 150 FIALTKNSAIAGAFSNAELFG-WQKLMSDKGYDIVPVFIWVAIGYLIITFTIS 201


>gi|213418515|ref|ZP_03351581.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 217

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%)

Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            AK+ ++  VLG+   L    A   +R F       + L++I   +I G P +V +   Y
Sbjct: 16  GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY 73

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +A
Sbjct: 74  ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 124

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +
Sbjct: 125 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 184

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+EI       YL ++++++  + RL  ++ +
Sbjct: 185 ALEIWSAVAVFYLIITLVLSFILRRLERRMKI 216


>gi|308186179|ref|YP_003930310.1| glutamine transport system permease protein glnP [Pantoea vagans
           C9-1]
 gi|308056689|gb|ADO08861.1| Glutamine transport system permease protein glnP [Pantoea vagans
           C9-1]
          Length = 219

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 90  FTAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            R+  ++ +
Sbjct: 210 RRIEKRVKI 218


>gi|261251729|ref|ZP_05944303.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260938602|gb|EEX94590.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 303

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 79/145 (54%), Gaps = 5/145 (3%)

Query: 252 GQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           G  N I     G + +    +S  + +   ++A++AE+VRSGL ++PRGQ EAA +LGL+
Sbjct: 152 GNLNVIQSVLFGPANLWENILSGILCVGLLSSAYVAEVVRSGLTSIPRGQWEAADSLGLS 211

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ PQ + +I P L  Q ++L+K++S+   +   ++  VG  + N +G   EI
Sbjct: 212 AWVKYRYVIAPQVLAAITPALAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEI 271

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            LI    YL L + ++    R+  +
Sbjct: 272 WLIVGLAYLVLCLTLSFIFKRIEKR 296


>gi|317052938|ref|YP_004119292.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953265|gb|ADU72736.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 223

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 103/191 (53%), Gaps = 12/191 (6%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS-------TVSPEFM 267
            G  L ++  S+     +P +VLI      + + P +  F +I  +       T+SP F 
Sbjct: 38  AGMVLAIMKNSSLRSLRIPAMVLIGF----YRNTPAIVHFFWIYYALPVISPLTLSP-FA 92

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +ALS  +AAF AE+ R G+ ++  GQ E A ALG+    A R ++ PQA+R +IPP 
Sbjct: 93  AAVLALSAQSAAFYAEVYRGGIQSISAGQWEGAKALGMPRSTALRRIIFPQALRRMIPPF 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +   LLK+++LA ++ +++L+     + +QT + +E+  +   +Y +L ++I+     
Sbjct: 153 LERSFELLKSTALASSLAYSELLYQAMQVNSQTYRPLEVYSVIAVMYFTLLLIISQCSQV 212

Query: 388 LNAKIALKEKK 398
           +  ++A+ + +
Sbjct: 213 IEKRLAVSDVR 223


>gi|227548107|ref|ZP_03978156.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079833|gb|EEI17796.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 309

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 61/85 (71%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  F+   + L+   AA++AEIVRSG+ +VP GQ+EA+ ALG++  +  +  +LPQAMR 
Sbjct: 141 SSAFLLAVVGLALNEAAYMAEIVRSGVSSVPEGQIEASKALGMSWSQTMKRTVLPQAMRI 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFA 347
           IIPP  +++++LLK SSL VAV ++
Sbjct: 201 IIPPTGNEFISLLKTSSLVVAVPYS 225


>gi|260102128|ref|ZP_05752365.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           helveticus DSM 20075]
 gi|260084018|gb|EEW68138.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           helveticus DSM 20075]
          Length = 546

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++
Sbjct: 400 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNE 459

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  
Sbjct: 460 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEK 519

Query: 391 KIALKE 396
           K+  K+
Sbjct: 520 KLEGKK 525



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E  +     T+   Y   I+ G   T  LA  G +    IG LVG           
Sbjct: 289 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTR 348

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A  +V W+  VYVE+FR  P +V    +Y
Sbjct: 349 GKRWALNVVKWLLSVYVEIFRGTPMMVQAAVIY 381


>gi|10955057|ref|NP_059713.1| hypothetical protein pTi_041 [Agrobacterium tumefaciens]
 gi|33860188|sp|P35114|OCCM_AGRTU RecName: Full=Octopine transport system permease protein occM
 gi|154764|gb|AAA50515.1| transport protein [Agrobacterium tumefaciens]
 gi|496542|emb|CAA82984.1| OccM [Agrobacterium tumefaciens]
 gi|8572696|gb|AAF77142.1| occM [Agrobacterium tumefaciens]
 gi|81176504|gb|ABB59526.1| OccM [Agrobacterium tumefaciens]
          Length = 245

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 112/204 (54%), Gaps = 23/204 (11%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKY 242
           ++ VFS  LG VL+  L   R+SR +       LP    + F IF   G P LV I   Y
Sbjct: 24  QLAVFSVALGTVLAFGLALMRVSRLWWLD----LP----ARFYIFAFRGTPLLVQI---Y 72

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +++    L QF  +  S + P     Y     AL+  TAA+ AEI+R GL++VP GQ+E
Sbjct: 73  IIYYG---LSQFPDVRHSFIWPFLRDAYWCAMAALALNTAAYTAEIMRGGLLSVPAGQIE 129

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A G+   K  R +++PQA+R ++P  +++ + ++K++SLA  +   ++  +   +I+
Sbjct: 130 AAKACGMGRVKLFRRIVIPQAIRQMLPGYSNEVILMVKSTSLASTITIMEITGIAAKLIS 189

Query: 359 QTGQAIEIILIWMFIYLSLSIMIA 382
           ++ + +E+      IYL L+ ++A
Sbjct: 190 ESYRTVEVFSCAGAIYLILNFIVA 213


>gi|296167082|ref|ZP_06849493.1| GlnQ protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897572|gb|EFG77167.1| GlnQ protein [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 605

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 21/212 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           TN+ I V    LG+VL++      R              + T +  GLP +V+I L    
Sbjct: 386 TNSAI-VIGLALGMVLAMAGISNRRWLRWPA-------RVYTDIFRGLPEVVIILLIG-- 435

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G    +GG T    +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG
Sbjct: 436 ------MGVGPLVGGLTNKNPYPLGIAALGLMAAAYIGEILRSGIQSVDPGQLEASRALG 489

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQT 360
            ++  A RLV++PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  QT
Sbjct: 490 FSYPTAMRLVVVPQGIRRVLPALVNQFIGLLKASALVYFLGLIAEQRELFQVGRDLNAQT 549

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G    ++   +F YL L+I +   +N ++A++
Sbjct: 550 GSLSPLVAAGLF-YLILTIPLTHLVNYIDARL 580


>gi|295401072|ref|ZP_06811046.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976865|gb|EFG52469.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 235

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 18/207 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +F +G++L++ AT L+R    K  + +  +Y+S   I G P LV +   + + +  P 
Sbjct: 42  VITFAIGLILAI-ATALARISGVKALEIIARIYVSA--IRGTPLLVQL---FIIFYGLPN 95

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G           P F +  I  S    A+ +EIVR+ ++++P+GQ EAA +LG+T  +A
Sbjct: 96  IG--------ITIPSFPAAIIGFSLNVGAYASEIVRAAILSIPKGQWEAAYSLGMTTGQA 147

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EI 366
            R V+ PQA R  IPPL++ +++L+K++SLA  +  +++      I +   + +    E 
Sbjct: 148 LRRVIFPQAARVSIPPLSNTFISLVKDTSLASLILVSEMFRKAQEIASTNYEFLLLYTEA 207

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +I+  I   LSI+      RLN  IA
Sbjct: 208 AIIYWIICFLLSIVQNRIEERLNRYIA 234


>gi|254508776|ref|ZP_05120888.1| ABC-type amino acid transport system, permease component [Vibrio
           parahaemolyticus 16]
 gi|219548296|gb|EED25309.1| ABC-type amino acid transport system, permease component [Vibrio
           parahaemolyticus 16]
          Length = 365

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 220 FLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|152998390|ref|YP_001343225.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150839314|gb|ABR73290.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 366

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 32/218 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-------LKYQ 243
           V SF LGIVL+L      R       K++ +++I T     L T++ +A       L   
Sbjct: 170 VASFPLGIVLAL-----GRRSEMPIAKSVCVVFIETIRAVPLITILFMASVMIPLFLPEG 224

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F+K                  + + I ++ ++AA++AE+VR GL A+P+GQ EAA A+
Sbjct: 225 LNFNK-----------------LLRVLIGITLFSAAYMAEVVRGGLQAIPKGQYEAADAM 267

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL---VSVGGTIINQT 360
           GLT+ ++  LV+LPQA++ +IP + + ++ L K+++L   VG  D    +       N  
Sbjct: 268 GLTYWQSMILVILPQALKLVIPGIVNSFIALFKDTTLVYIVGMFDFLGRIQAANHDSNWL 327

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  IE       IY  +   ++ +   L  K+    K+
Sbjct: 328 GTTIEGYAFAALIYWVICFGMSRYSMALERKLETGHKR 365


>gi|22536670|ref|NP_687521.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010606|ref|NP_735001.1| hypothetical protein gbs0537 [Streptococcus agalactiae NEM316]
 gi|76787397|ref|YP_329224.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|22533510|gb|AAM99393.1|AE014214_7 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|23094959|emb|CAD46181.1| unknown [Streptococcus agalactiae NEM316]
 gi|76562454|gb|ABA45038.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|319744567|gb|EFV96920.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus agalactiae ATCC 13813]
          Length = 230

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 76/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + A+I+EIVR+G+ AVP GQ+EAA +LG+  +   R V+LPQA ++I+P L ++
Sbjct: 101 IIISLNSGAYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ ++K+S+L   +G  +L +   +++  T   +  +L   F YL L+ +++  + ++ 
Sbjct: 161 FITIIKDSALLQTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQME 219


>gi|237798050|ref|ZP_04586511.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020901|gb|EGI00958.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 222

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 18/201 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG  L+L   RLSR    K    L  +Y+S F   G P LV + L Y   +  P L
Sbjct: 33  FGLVLGFGLALM--RLSRF---KPVNWLARIYVSFFR--GTPLLVQLFLIY---YGLPEL 82

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G         + P   +L I  S   AA+  EI+RS + ++ RGQ EAA ++G+T  +  
Sbjct: 83  G-------IELDPLTAAL-IGFSLNMAAYACEILRSAIGSIERGQWEAAASIGMTRWQTL 134

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R+ +PPL + +++L+K+++LA  +   +L      I  +T +   + L   
Sbjct: 135 RRAILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAA 194

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            IY  L+  ++   NRL A++
Sbjct: 195 LIYWILATALSYLQNRLEARV 215



 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  K V W+ R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFFGLVLGFGLALMRLSRFKPVNWLARIYVSFFRGTPLLVQLFLI 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|116254868|ref|YP_770704.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259516|emb|CAK10654.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 235

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 69/111 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA+ +E +RSG+ +V  GQM+AA ALG  +  A R V++PQ +R+ +PPL + 
Sbjct: 106 IGLGLCQAAYFSEDLRSGVRSVSPGQMQAARALGHGYVSAMRFVIMPQGVRNALPPLINH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L KNSSLAV +G ++L      I N + +  E+ LI   +YL  S++I
Sbjct: 166 SVSLFKNSSLAVVIGASELTHAVKEIENLSFRTFEVYLIGTVLYLFFSLVI 216


>gi|163938357|ref|YP_001643241.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|163860554|gb|ABY41613.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
          Length = 230

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL+L ++    ++ L  
Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEK 208

Query: 391 KIALKEKK 398
           ++  KE  
Sbjct: 209 RLQRKENN 216


>gi|302188037|ref|ZP_07264710.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. syringae 642]
          Length = 218

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 75/123 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   TAA+ +EI+R GL AVP GQ EAA+ LGL    A R+V++PQAMR  +PPL   
Sbjct: 93  LALGWSTAAYTSEIIRGGLKAVPPGQREAAVTLGLAPATAMRIVIVPQAMRICLPPLLGF 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L +L+ +SL   +   ++VS    I + T Q + ++++   +Y ++ I   + ++++  
Sbjct: 153 ALVMLQTTSLCFTIALPEIVSRANEIGSATFQYMSVLMLTGLMYAAVCIPATIVVSQMER 212

Query: 391 KIA 393
           +++
Sbjct: 213 RLS 215


>gi|253987652|ref|YP_003039008.1| amino acid ABC transporter permease [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779102|emb|CAQ82262.1| similar to amino acid permease component of abc transporter
           [Photorhabdus asymbiotica]
          Length = 247

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 11/223 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   ++  A   V S + G++  +  T        + G  + LL         +P ++
Sbjct: 17  TFPDGPLEGAALTLVISLIAGVISIVLGTVAGVALAMQKGFWVNLLAAVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  PV+            PE  ++  AL+  T+A++A  V++G+IA+  GQ
Sbjct: 77  LI---FWTYFLLPVMLGMEI-------PEITTVVCALALITSAYLAHGVKAGIIAIGAGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  VG A+L  +   +
Sbjct: 127 WQAGLSLGFNRWQVLWYIVLPQALRMMVPSFINQWIALIKDTSLAYIVGVAELSFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            N++     E+ L   FIY  + + + L  N +  + +L+ +K
Sbjct: 187 NNRSMVYPTEVFLFVAFIYFVMCLTLELAANYIARRFSLQRRK 229


>gi|152969396|ref|YP_001334505.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206580885|ref|YP_002239549.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|238893864|ref|YP_002918598.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288936394|ref|YP_003440453.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510551|ref|ZP_06549921.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55]
 gi|330010080|ref|ZP_08306679.1| glutamine ABC transporter permease protein [Klebsiella sp. MS 92-3]
 gi|150954245|gb|ABR76275.1| glutamine ABC transporter permease component [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206569943|gb|ACI11719.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|238546180|dbj|BAH62531.1| glutamine ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891103|gb|ADC59421.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777267|gb|EFD85265.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55]
 gi|328534631|gb|EGF61205.1| glutamine ABC transporter permease protein [Klebsiella sp. MS 92-3]
          Length = 219

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++P
Sbjct: 90  FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFIL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRMKI 218


>gi|330446207|ref|ZP_08309859.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490398|dbj|GAA04356.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 365

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 58/78 (74%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++LPQA++  IP + + ++ L 
Sbjct: 240 FSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIVLPQALKITIPSIVNTFIGLF 299

Query: 336 KNSSLAVAVGFADLVSVG 353
           K++SL + +G  D++ +G
Sbjct: 300 KDTSLVLIIGMFDVLGIG 317


>gi|327393260|dbj|BAK10682.1| glutamine ABC transporter permease protein GlnP [Pantoea ananatis
           AJ13355]
          Length = 219

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 90  FTAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            R+  ++ +
Sbjct: 210 RRIEKRVKI 218


>gi|302526371|ref|ZP_07278713.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
 gi|302435266|gb|EFL07082.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
          Length = 324

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 112/220 (50%), Gaps = 26/220 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLI-------A 239
           VF  V GIVL+L   RLS++         PLL    +   ++   +P +VL+       A
Sbjct: 95  VFGLVGGIVLALL--RLSKN---------PLLQAVSWAYVWIFRSIPLIVLLLFLANVTA 143

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L   L    P    F     + V   F+   + LS   AA+ AEIVR+G+++V +GQ+EA
Sbjct: 144 LYSTLSLGIPFGPSFFSFSATDVLSFFVVAVLGLSLNEAAYAAEIVRAGVLSVDQGQLEA 203

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN- 358
           A ALGL   +  R ++LPQA R+I+P   +Q + LLK +S+       +L  V  T  + 
Sbjct: 204 AAALGLPRSRQYRRIILPQATRAIVPAYANQLIGLLKGTSVVYITSLLELFGVVETQAST 263

Query: 359 QTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALK 395
            +GQ I ++L   +W  I  S+  +I  ++ R  ++ AL+
Sbjct: 264 NSGQIIPLLLVGTVWYIILTSVLSVIQYYVERFFSRGALR 303


>gi|225388954|ref|ZP_03758678.1| hypothetical protein CLOSTASPAR_02696 [Clostridium asparagiforme
           DSM 15981]
 gi|225044984|gb|EEG55230.1| hypothetical protein CLOSTASPAR_02696 [Clostridium asparagiforme
           DSM 15981]
          Length = 226

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 78/128 (60%), Gaps = 7/128 (5%)

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           KP    +N IGG++ +       +ALS    A++AEI+R G+ AV +GQMEAA +LGL +
Sbjct: 82  KPYGFSWNAIGGASTAG-----MVALSLNAGAYMAEIIRGGIEAVDKGQMEAARSLGLPY 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            KA R ++LPQA R+++P + +Q++  LK++SL   +G  +L   G  I   +  A  ++
Sbjct: 137 GKAMRKIILPQAFRTMMPSIINQFIITLKDTSLVSVIGPRELTQNGKIIAANS--ASLVM 194

Query: 368 LIWMFIYL 375
            IW+ + L
Sbjct: 195 PIWLSVAL 202



 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 8/72 (11%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +I AT++GT+ G  ++S   ++  I  +Y+++ R  P +V +F +Y  + SVL       
Sbjct: 29  LIAATVLGTIFGLFKVSGMGILKVIADIYIDIIRGTPLMVQVFIIYYGLGSVLK------ 82

Query: 164 VLPFGMFLNNRG 175
             P+G   N  G
Sbjct: 83  --PYGFSWNAIG 92


>gi|167769494|ref|ZP_02441547.1| hypothetical protein ANACOL_00828 [Anaerotruncus colihominis DSM
           17241]
 gi|167668462|gb|EDS12592.1| hypothetical protein ANACOL_00828 [Anaerotruncus colihominis DSM
           17241]
          Length = 205

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 25/180 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ VLG++  LF        H +  K +   YI   ++ G+P +VL             
Sbjct: 14  IFATVLGLISCLFQIS-----HSRVLKFISQAYID--IMRGVPVMVL------------- 53

Query: 251 LGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              F + G +      MS  IA    LS    A+++EI RSG+ AV  GQMEAA +LGL 
Sbjct: 54  -AFFIYFGVTRALDVRMSAEIAGILTLSLNAGAYLSEIFRSGIQAVNIGQMEAARSLGLP 112

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A R V+LPQA+R +IP + +Q++  LK++S+  A+G  +L   G  II +  ++ EI
Sbjct: 113 YGRAMRKVILPQAVRIVIPSMVNQFIITLKDTSILYAIGMPELTQAGSLIIARNFRSFEI 172


>gi|15600268|ref|NP_253762.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107104174|ref|ZP_01368092.1| hypothetical protein PaerPA_01005247 [Pseudomonas aeruginosa PACS2]
 gi|116053222|ref|YP_793544.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894174|ref|YP_002443043.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238218|ref|ZP_04931541.1| hypothetical protein PACG_04344 [Pseudomonas aeruginosa C3719]
 gi|254244043|ref|ZP_04937365.1| hypothetical protein PA2G_04877 [Pseudomonas aeruginosa 2192]
 gi|296391925|ref|ZP_06881400.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|9951368|gb|AAG08460.1|AE004920_10 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115588443|gb|ABJ14458.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170149|gb|EAZ55660.1| hypothetical protein PACG_04344 [Pseudomonas aeruginosa C3719]
 gi|126197421|gb|EAZ61484.1| hypothetical protein PA2G_04877 [Pseudomonas aeruginosa 2192]
 gi|218774402|emb|CAW30219.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 320

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 97/178 (54%), Gaps = 23/178 (12%)

Query: 193 SFVLGIVLSLFA--TRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           S  +G+ + L A   RLS++   H+     L  +Y+   L+ G P LV I + Y   F  
Sbjct: 132 SGAIGLAIGLVAGLCRLSKNPTLHD-----LSTIYVE--LVRGTPLLVQIFIFY--FFIG 182

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            VL          +S EF  +  AL+ +T A++AEI+R+G+ ++ RGQ EAA +LGL   
Sbjct: 183 TVL---------NLSREFAGV-AALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNAG 232

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI
Sbjct: 233 QSMRYVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 42/97 (43%)

Query: 53  EKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112
           EK  +++    L    G ++ +G     +    A  +L G   T WL+         IG 
Sbjct: 82  EKQVVTVAQDSLQFSEGDDVAEGDAVGVTRHWAAGPLLWGLWTTLWLSLVSGAIGLAIGL 141

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G  RLS N  +  +  +YVE+ R  P LV IF  Y
Sbjct: 142 VAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIFY 178


>gi|322390821|ref|ZP_08064331.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142491|gb|EFX37959.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 230

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 32/234 (13%)

Query: 179 PTLTMDTNA--KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST---------- 226
           PTL     A   + V + VLG    L  T  ++   +K G  L   Y+ T          
Sbjct: 14  PTLVQALPATLALMVLTTVLGSAFGLVLT-WAQVSEDKVGAGLAKGYVFTLRCTPPIVLL 72

Query: 227 FLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           FL+F GLP      L + L  D     +F F+             +A+    AA I+E+ 
Sbjct: 73  FLVFYGLPQF----LNWWLGVDIDHWSKFVFV------------LVAMFLLFAAMISEVF 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           ++  +A+P+GQMEA +++GLT  +    ++LPQA R  +P +T+  LNL+++++LA  +G
Sbjct: 117 KAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYTIG 176

Query: 346 FADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           F D++  G  +I  N    ++E       IY  ++++I+     L  ++++ E+
Sbjct: 177 FIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIALVISFSAQLLEKRLSVTER 230


>gi|290890238|ref|ZP_06553318.1| hypothetical protein AWRIB429_0708 [Oenococcus oeni AWRIB429]
 gi|290480125|gb|EFD88769.1| hypothetical protein AWRIB429_0708 [Oenococcus oeni AWRIB429]
          Length = 176

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 70/114 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I +S  T A++AEI+R G+I++ +GQ EAA ALG+TH +    ++LPQA+R+ IP +
Sbjct: 26  SALIIVSINTGAYLAEIIRGGIISIDQGQFEAASALGMTHFQQMEKIVLPQAVRNSIPAV 85

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           T++++  +K++S+   +  ++L   G TI  Q  Q     L    IYL L+  I
Sbjct: 86  TNEFIVNIKDTSVLSIISVSELFFTGSTIAGQNFQFFHTYLTISLIYLVLTFTI 139


>gi|124265638|ref|YP_001019642.1| amino acid permease [Methylibium petroleiphilum PM1]
 gi|124258413|gb|ABM93407.1| amino acid permease [Methylibium petroleiphilum PM1]
          Length = 222

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 82/131 (62%), Gaps = 6/131 (4%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I  + + AA+ +EI+R+G+ +VP+GQ+ A  A+G+T+ ++ +L++LPQA R+++P 
Sbjct: 93  LSAIITFTVFEAAYYSEIMRAGIQSVPKGQVYAGYAVGMTYSQSMQLIVLPQAFRNMLPV 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           L +Q + L +++SL  A+G  DL+    V G   N   + +E  L+   +Y  +   +++
Sbjct: 153 LMTQTIILFQDTSLVYAIGAYDLLKGFEVAGKNFN---RPVETYLVAAVVYFVICFSLSM 209

Query: 384 FMNRLNAKIAL 394
            + RL  KIA+
Sbjct: 210 LVRRLQKKIAI 220


>gi|152988501|ref|YP_001351133.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150963659|gb|ABR85684.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 320

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 96/177 (54%), Gaps = 21/177 (11%)

Query: 193 SFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           S  +G+ + L A   RLS++    T   L  +Y+   L+ G P LV I + Y        
Sbjct: 132 SGAIGLAIGLVAGLCRLSKN---PTLHDLSTIYVE--LVRGTPLLVQIFIFY-------- 178

Query: 251 LGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                FIG    +S EF  +  AL+ +T A++AEI+R+G+ ++ RGQ EAA +LGL   +
Sbjct: 179 ----FFIGTVLDLSREFAGV-AALALFTGAYVAEIIRAGVQSIARGQNEAARSLGLNASQ 233

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +    EI
Sbjct: 234 SMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEI 290



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 2/101 (1%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF-SGMIPAT 108
           ++ E+  L++    L    G ++ +G V   +    A  +L G   T WL+  SG I   
Sbjct: 79  DSGEQQVLTVAADSLQFAEGDDVAEGDVVGVTRHWAAGPLLWGLWTTLWLSLVSGAI-GL 137

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            IG + G  RLS N  +  +  +YVE+ R  P LV IF  Y
Sbjct: 138 AIGLVAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIFY 178


>gi|15673779|ref|NP_267954.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|281492390|ref|YP_003354370.1| polar amino acid ABC transporter permease [Lactococcus lactis
           subsp. lactis KF147]
 gi|12724822|gb|AAK05895.1|AE006409_5 glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|281376054|gb|ADA65545.1| Polar amino acid ABC transporter, permease protein [Lactococcus
           lactis subsp. lactis KF147]
 gi|326407285|gb|ADZ64356.1| polar amino acid ABC transporter, permease protein [Lactococcus
           lactis subsp. lactis CV56]
          Length = 228

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + A++AEIVR+G+ AVP GQ EAA +LG+  R+A   V+LPQA+R+I+P + ++
Sbjct: 101 IVISLNSGAYMAEIVRAGIEAVPLGQKEAAYSLGIRPRQAMATVILPQALRNILPAVGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386
           ++ ++K+SSL   +G  ++ +   T+ N T Q I     + L +  +   +S ++ LF  
Sbjct: 161 FVTIIKDSSLLYTIGVMEVFNGAQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEK 220

Query: 387 RLNAKIA 393
           +L    A
Sbjct: 221 KLGKGYA 227


>gi|260904003|ref|ZP_05912325.1| amino acid ABC transporter membrane protein [Brevibacterium linens
           BL2]
          Length = 263

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 27/215 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST---FLIFGLPTLVLIALKYQLHF 246
           FV +  LGI+L+L           K     P  +I+T    L  GLP L++      L F
Sbjct: 69  FVLALSLGILLALM----------KISSVAPYRWIATGYIELFRGLPALIVF-----LAF 113

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V   F     +     ++++ +AL    +A+IAE +R+GL AVP+GQ EAA +LG++
Sbjct: 114 GYAVPYAFGIRMDT-----YVTVMLALGIVESAYIAETLRAGLQAVPKGQFEAARSLGMS 168

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   +++PQA R I+PPLT++ + + K+SSL   +G      +L   G   I+    
Sbjct: 169 HSRAMITIVIPQAFRIILPPLTNEIILMTKDSSLIYILGLTAAQYELTKFGREAISNPEA 228

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +++    YL ++I + +   R  ++ A  +K
Sbjct: 229 GLTPLVVAGVCYLIITIPLGMLARRFESRTAKIKK 263


>gi|77405308|ref|ZP_00782404.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77176103|gb|EAO78876.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 230

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 76/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + A+I+EIVR+G+ AVP GQ+EAA +LG+  +   R V+LPQA ++I+P L ++
Sbjct: 101 IIISLNSGAYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ ++K+S+L   +G  +L +   +++  T   +  +L   F YL L+ +++  + ++ 
Sbjct: 161 FITIIKDSALLQTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQME 219


>gi|319945662|ref|ZP_08019914.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319748261|gb|EFW00503.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 230

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 29/199 (14%)

Query: 212 HEKTGKALPLLYIST----------FLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +K G  L   Y+ T          FL+F GLP      L + L  D     +F F+   
Sbjct: 48  EDKVGAGLAKGYVFTLRCTPPIVLLFLVFYGLPQF----LNWWLGIDIDHWSKFVFV--- 100

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IA+    AA I+E+ ++  +A+P+GQMEA +++GLT  +    ++LPQA 
Sbjct: 101 ---------LIAMFLLFAAMISEVFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLS 378
           R  +P +T+  LNL+++++LA  +GF D++  G  +I  N    ++E       IY +++
Sbjct: 152 RVALPNMTTAILNLMRDAALAYTIGFIDIMGAGNNLISRNLGNYSLETYTAVAVIYWAIA 211

Query: 379 IMIALFMNRLNAKIALKEK 397
           ++I+     L  ++++ E+
Sbjct: 212 LVISFSAQLLEKRLSVTER 230


>gi|302387424|ref|YP_003823246.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302198052|gb|ADL05623.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 230

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 24/211 (11%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----ALPLLYISTFLIFGLPTLVLIALKY 242
           KI  F+ ++GI+L  F   + R  +E T K     A+  +Y++  +I G P +V + + Y
Sbjct: 31  KITFFAVLIGILLG-FLVAIIRSTYENTHKLKILNAICSVYLT--VIRGTPVVVQLMIMY 87

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            + F             ST   +  +  +A    + A++AEI RSG+ ++ RGQ EA  +
Sbjct: 88  FVIF------------ASTNPGQVPTAILAFGINSGAYVAEIFRSGISSIERGQFEAGRS 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG  + +    +++PQA ++++P L ++++ LLK +S+A  +G  DL   G  I ++T  
Sbjct: 136 LGFNYAQTMWFIIMPQAFKNVVPTLANEFIVLLKETSVAGYIGLQDLTKGGDIIKSRTYS 195

Query: 363 A----IEIILIWMFIYLSLSIMIALFMNRLN 389
           A    I + +I++ + +  S ++ L   RL+
Sbjct: 196 AFMPLIAVAIIYLVMVMVFSYLVKLLERRLH 226


>gi|302518222|ref|ZP_07270564.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
 gi|302427117|gb|EFK98932.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
          Length = 334

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 35/212 (16%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF-- 230
           RGL    LT+   A + V  FVLG +L+L   R+S +         P+L ++S+  I+  
Sbjct: 112 RGLG---LTLWLTALVMVLGFVLGTLLAL--GRMSSN---------PVLSWVSSGYIWFF 157

Query: 231 -GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------------IALSCYT 277
              P LV +   + +    P LG      G    PEF+++             + L+ + 
Sbjct: 158 RSTPILVQLLFWFNIGALYPRLGL-----GIPFGPEFVTVKTVNLLGPVTVAVLGLTLHE 212

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE+VR GL++V RGQ+EAA +LGL+  +  R ++LPQAMR+I+PP  +  +  LK 
Sbjct: 213 AAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALKG 272

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +S+   +   DL+     + ++T Q I ++L+
Sbjct: 273 TSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLV 304



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +D    +A+L G   T WL    M+   ++GTL+  GR+S+N +++W+   Y+  FR+ P
Sbjct: 102 ADYFTTSAVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSSNPVLSWVSSGYIWFFRSTP 161

Query: 141 PLVVIFFLYK 150
            LV + F + 
Sbjct: 162 ILVQLLFWFN 171


>gi|227508252|ref|ZP_03938301.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227511259|ref|ZP_03941308.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227523474|ref|ZP_03953523.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227085510|gb|EEI20822.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227089369|gb|EEI24681.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227192481|gb|EEI72548.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 232

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 98/175 (56%), Gaps = 4/175 (2%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + SFV+G++++LF T L R    K G  L L  I  F ++   +  L+   + ++F  
Sbjct: 23  IAIISFVIGLIIALF-TALIR-LSSKRGAFLMLKAIFRFYVWLFRSTPLLVQLFIVYFGL 80

Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P L  +  F  G  ++P    + I  S  T A+ +E +R+ ++++P GQ EAA ++G+T 
Sbjct: 81  PYLKIKGIFPNGIQLNPVIAGI-ITFSLNTGAYCSETIRASILSIPEGQWEAAYSIGMTK 139

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
               R ++LPQA+R  +PPL + +++L+K++SLA ++   ++  V   I  Q  Q
Sbjct: 140 SVVLRRIILPQAIRISLPPLANSFISLVKDTSLAASITIVEMFEVSQQIAAQNYQ 194


>gi|161504005|ref|YP_001571117.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865352|gb|ABX21975.1| hypothetical protein SARI_02098 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 219

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 109/198 (55%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGL-AAGFARTFGGWFANHIALIFIE--IIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+L
Sbjct: 85  L---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|52144882|ref|YP_081947.1| amino acid ABC transport system, permease [Bacillus cereus E33L]
 gi|51978351|gb|AAU19901.1| amino acid ABC transport system, permease [Bacillus cereus E33L]
          Length = 269

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 21/224 (9%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGL 232
           ++PTL   T    ++ + S VLG ++ L     R+S   + K   ++  +YI+  +I G 
Sbjct: 47  TYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFFRIS---NNKFLNSIAHVYIA--IIRGT 101

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V
Sbjct: 102 PLIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSV 149

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q++  LK+SSL   VG ++L   
Sbjct: 150 DRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGMSELWGS 209

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +I     Q +E  +I    YL L ++    +N L  ++  KE
Sbjct: 210 GLSIAAGNFQQLETYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 253



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T +L   + T  L  + ++  ++IG L    R+S NK +  I  VY+ + R  P +
Sbjct: 46  STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKFLNSIAHVYIAIIRGTPLI 104

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 105 VQIAILYFGITSVV 118


>gi|257865888|ref|ZP_05645541.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC30]
 gi|257875515|ref|ZP_05655168.1| polar amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|325569898|ref|ZP_08145892.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus casseliflavus ATCC 12755]
 gi|257799822|gb|EEV28874.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC30]
 gi|257809681|gb|EEV38501.1| polar amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|325157021|gb|EGC69189.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus casseliflavus ATCC 12755]
          Length = 229

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  + A++AEIVR G+ AV  GQ EAA +LGL   +  R V+LPQA+R+I+PPL ++
Sbjct: 102 IALSLNSGAYVAEIVRGGINAVDYGQTEAAGSLGLRPFQTMRYVVLPQALRNILPPLGNE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSL   +G  +L++    ++  + Q +    +   IY  L+   +  ++    
Sbjct: 162 FIVLIKDSSLLSTIGIYELMNSAQIVVTSSFQPLTPFYVAAVIYFILTFTTSRLLSLWEK 221

Query: 391 KIALKEKK 398
           K+    ++
Sbjct: 222 KLGKGYRR 229


>gi|222102584|ref|YP_002539623.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739185|gb|ACM39918.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 219

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 14/203 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+ L L  T + R F  K   A+   Y+  ++I G P LV +   + + +  P 
Sbjct: 21  ILSFTFGLTLGL-VTAIGRLFGAKPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 74

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A
Sbjct: 75  IG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 126

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
               +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T + + + +  
Sbjct: 127 MLRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 186

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IYL+L  +++    RL  + A
Sbjct: 187 ALIYLALCSVLSTVQVRLERRFA 209


>gi|212716471|ref|ZP_03324599.1| hypothetical protein BIFCAT_01395 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660724|gb|EEB21299.1| hypothetical protein BIFCAT_01395 [Bifidobacterium catenulatum DSM
           16992]
          Length = 327

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I   +V   F + ++ L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSMIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++  
Sbjct: 204 RVVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLN 389
             YL ++ ++ +  +RL 
Sbjct: 264 IWYLVITSILMVLQSRLE 281


>gi|150403485|ref|YP_001330779.1| polar amino acid ABC transporter inner membrane subunit
           [Methanococcus maripaludis C7]
 gi|150034515|gb|ABR66628.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C7]
          Length = 219

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 95/190 (50%), Gaps = 13/190 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI + SF+L +V+++    +      KT   + + YI  F   G P L+      QL F 
Sbjct: 22  KITIMSFLLAVVIAVLVGSIRAMNFSKTLNLILMAYIEVFR--GTPLLI------QLFFI 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              L     +  ST +       + LS    A+I+EI+R+ + +VP GQ EAA +LG++ 
Sbjct: 74  YYGLPSIGIVMSSTFAA-----VLGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMSK 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++   ++LPQA R  IPPL + +  +LK SSL   +   +L  +G  I  +T +  EI 
Sbjct: 129 IESMIYIVLPQAFRITIPPLVNSFSAILKESSLISVLAITELTRIGQLIYTKTSRPFEIY 188

Query: 368 LIWMFIYLSL 377
           L    IYL L
Sbjct: 189 LTIGLIYLVL 198


>gi|315650536|ref|ZP_07903602.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315487191|gb|EFU77507.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 230

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 110/208 (52%), Gaps = 20/208 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQL 244
           K+  F+ +LG VL  F+  + R  +E T K   L ++      +I G P +V + + Y +
Sbjct: 31  KVTFFAVILGFVLG-FSVAIVRDVYENTKKLKVLNFLCNVYLTVIRGTPVVVQLLIIYFV 89

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F             S    + ++  +A    + A+ AEI RSG+ ++P+GQMEA  +LG
Sbjct: 90  IFS------------SIKIDKSIAAVLAFGINSGAYQAEIFRSGINSIPKGQMEAGRSLG 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA- 363
             +R+    +++PQA+++++P L ++++ L+K +S+A  +   DL   G  I ++T  A 
Sbjct: 138 FNYRQTMVNIIMPQAIKNVLPTLGNEFIVLMKETSVAGYIALEDLTKAGDIIRSRTYSAM 197

Query: 364 ---IEIILIWMFIYLSLSIMIALFMNRL 388
              + + L+++ + +  S ++ +F  RL
Sbjct: 198 MPFLAVALLYLIMVMFFSHLLKMFERRL 225


>gi|242280217|ref|YP_002992346.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123111|gb|ACS80807.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 344

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 104/188 (55%), Gaps = 15/188 (7%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           K  +  P + IS F+I+   G P L+ +   + +++  P +G        T+SP   +L 
Sbjct: 169 KISRMQPFMAISWFIIWFFRGTPLLLQL---FFIYYGLPAIG-------ITLSPLAAAL- 217

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A++AEI+R+G+ ++  GQ EAA ALG+T+ +  R V++PQ  + IIPP+ ++
Sbjct: 218 IGLGINYSAYLAEIIRAGIESIDDGQTEAAKALGMTYGQTMRRVIIPQTYKRIIPPIANE 277

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +   +L+     + N     + ++++   IYL  + +   F  ++  
Sbjct: 278 FIALIKDTALVSTIAMVELMRAADQMFNAYFN-VTVLVMAAVIYLIFTSVFTFFFEKIEY 336

Query: 391 KIALKEKK 398
           K+ + E++
Sbjct: 337 KVGVYERR 344


>gi|295839709|ref|ZP_06826642.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces sp. SPB74]
 gi|197700002|gb|EDY46935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces sp. SPB74]
          Length = 340

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 35/212 (16%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF-- 230
           RGL    LT+   A + V  FVLG +L+L   R+S         A P+L ++S+  I+  
Sbjct: 118 RGLG---LTLWLTALVMVLGFVLGTLLAL--GRMS---------ANPVLSWVSSGYIWFF 163

Query: 231 -GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------------IALSCYT 277
              P LV +   + +    P LG      G    PEF+++             + L+ + 
Sbjct: 164 RSTPILVQLLFWFNIGALYPRLGL-----GIPFGPEFVTVKTVNLLGPVTVAVLGLTLHE 218

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE+VR GL++V RGQ+EAA +LGL+  +  R ++LPQAMR+I+PP  +  +  LK 
Sbjct: 219 AAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALKG 278

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +S+   +   DL+     + ++T Q I ++L+
Sbjct: 279 TSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLV 310



 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +D    +A+L G   T WL    M+   ++GTL+  GR+SAN +++W+   Y+  FR+ P
Sbjct: 108 ADYFTTSAVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSANPVLSWVSSGYIWFFRSTP 167

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
            LV + F +   +  L  P   + +PFG
Sbjct: 168 ILVQLLFWFN--IGAL-YPRLGLGIPFG 192


>gi|160942992|ref|ZP_02090230.1| hypothetical protein FAEPRAM212_00469 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445686|gb|EDP22689.1| hypothetical protein FAEPRAM212_00469 [Faecalibacterium prausnitzii
           M21/2]
          Length = 254

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 80/127 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L   + A+++EI+R GL+AV  GQMEA  +LGL +     ++++PQA+R+++P L ++
Sbjct: 128 LTLGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPALGNE 187

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK++SL   +G  +L+     I+N+T +A+  +L    IYL L ++    +++   
Sbjct: 188 FIVLLKDTSLITTIGGKELLYAAQGIMNRTYEAMFPLLGVALIYLILVMLFTWLLSKFER 247

Query: 391 KIALKEK 397
           ++A  ++
Sbjct: 248 RLAQSDR 254


>gi|16759747|ref|NP_455364.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764191|ref|NP_459806.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142480|ref|NP_805822.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56414071|ref|YP_151146.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161614919|ref|YP_001588884.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167550478|ref|ZP_02344235.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992065|ref|ZP_02573163.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230731|ref|ZP_02655789.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168236761|ref|ZP_02661819.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168240697|ref|ZP_02665629.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168263668|ref|ZP_02685641.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466430|ref|ZP_02700292.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168820021|ref|ZP_02832021.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194445368|ref|YP_002040065.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194448838|ref|YP_002044857.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194468570|ref|ZP_03074554.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737623|ref|YP_002113920.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197249080|ref|YP_002145785.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264015|ref|ZP_03164089.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197362994|ref|YP_002142631.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198242595|ref|YP_002214792.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389501|ref|ZP_03216112.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204929959|ref|ZP_03220980.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205352085|ref|YP_002225886.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856265|ref|YP_002242916.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213163838|ref|ZP_03349548.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213424778|ref|ZP_03357528.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213583835|ref|ZP_03365661.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213622114|ref|ZP_03374897.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213649898|ref|ZP_03379951.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|224582640|ref|YP_002636438.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238913895|ref|ZP_04657732.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289809887|ref|ZP_06540516.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
 gi|289823691|ref|ZP_06543303.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25296621|pir||AB0601 glutamine transport system permease protein GlnP STY0867 [imported]
           - Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16419335|gb|AAL19765.1| glutamine high-affinity transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16502040|emb|CAD05276.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138111|gb|AAO69682.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56128328|gb|AAV77834.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|161364283|gb|ABX68051.1| hypothetical protein SPAB_02673 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404031|gb|ACF64253.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194407142|gb|ACF67361.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194454934|gb|EDX43773.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194713125|gb|ACF92346.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195631095|gb|EDX49681.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197094471|emb|CAR59988.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|197212783|gb|ACH50180.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197242270|gb|EDY24890.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197290199|gb|EDY29556.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197937111|gb|ACH74444.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199601946|gb|EDZ00492.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204320953|gb|EDZ06154.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205271866|emb|CAR36702.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205324488|gb|EDZ12327.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329674|gb|EDZ16438.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334880|gb|EDZ21644.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339925|gb|EDZ26689.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205343078|gb|EDZ29842.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205347825|gb|EDZ34456.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708068|emb|CAR32359.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467167|gb|ACN44997.1| glutamine ABC transporter permease component [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|261246086|emb|CBG23888.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992575|gb|ACY87460.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157413|emb|CBW16902.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312911852|dbj|BAJ35826.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320085102|emb|CBY94889.1| L-cystine transport system permease protein tcyB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321226402|gb|EFX51453.1| Glutamate transport membrane-spanning protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323129135|gb|ADX16565.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622545|gb|EGE28890.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326627127|gb|EGE33470.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 219

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 114/212 (53%), Gaps = 14/212 (6%)

Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            AK+ ++  VLG+   L    A   +R F       + L++I   +I G P +V +   Y
Sbjct: 18  GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY 75

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +A
Sbjct: 76  ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 126

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +
Sbjct: 127 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+EI       YL ++++++  + RL  ++ +
Sbjct: 187 ALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218


>gi|213029271|ref|ZP_03343718.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 199

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 109/198 (55%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 13  GLVIGL-AAGFARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY---FALPM--AFND 64

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+L
Sbjct: 65  L---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVIL 120

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 121 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 180

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 181 ITLVLSFILRRLERRMKI 198


>gi|295109170|emb|CBL23123.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ruminococcus obeum A2-162]
          Length = 261

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 30/223 (13%)

Query: 193 SFVLGIVLSLF---------ATRLSRHFHEKTGKAL-------PLLYISTF---LIFGLP 233
            FVL ++L+L          A  + R+ H + G  L       PL +I+T    ++   P
Sbjct: 38  GFVLALILALMRMSNIRPFRALAVDRNGHLREGGPLVWLSKFNPLSFIATAYVEILRSTP 97

Query: 234 TLVLIALKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LV I + Y   F   D P    F FI  +   P      +AL   + A++ EI+R+G+ 
Sbjct: 98  VLVQIFIIYYGVFGMIDLPSFQMFGFIKFNRFFPG----VVALGMNSGAYLCEIIRAGIQ 153

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EAA +LGL+     R ++LPQA+++I+P + ++++ ++K S++   +G  D++
Sbjct: 154 SIDQGQTEAARSLGLSQTMNLRYIILPQALKNILPAIANEFVVIIKESAITYTIGVQDIM 213

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMNRLN 389
           S    +   T   IE +L+   IY  L    S +IA F  R++
Sbjct: 214 SAVNAVKGATFIIIEPLLVATAIYFCLCFPTSKLIAYFERRMS 256


>gi|293374469|ref|ZP_06620791.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292646848|gb|EFF64836.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 228

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 21/198 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG VLS  A      F     +  PL+     L FG+P L        LH   P  G  
Sbjct: 48  MLGKVLSKLADAYVAFF-----RGTPLMIQLFILWFGVPQL--------LHTRYPSFGW- 93

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  +S EF+   IAL+  + A+++EI R+G+ AV +GQ EA  +LGL+ ++  + V
Sbjct: 94  -------ISAEFLVGAIALAINSGAYVSEIFRAGIQAVDKGQFEAGRSLGLSEKQTLKHV 146

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+++I+P L ++++ ++K S++   +G  DL+     I   T  A  + ++   IY
Sbjct: 147 ILPQAVKNILPALGNEFVVIIKESAIVSVIGLRDLMYNSDMIQAATFNAFGVYVVAAVIY 206

Query: 375 LSLSIMIALFMNRLNAKI 392
             L+   +  ++ L  ++
Sbjct: 207 FILTASCSKLLSVLEGRL 224


>gi|28378733|ref|NP_785625.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254556936|ref|YP_003063353.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308180925|ref|YP_003925053.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28271570|emb|CAD64475.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254045863|gb|ACT62656.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308046416|gb|ADN98959.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 507

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 17/196 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           F F++GI+L+L   R+++    KT  + L   Y+    I G P +V +   Y   F    
Sbjct: 319 FGFIIGILLAL--ARMAKGNPLKTAIRWLATAYVE--FIRGTPMMVQVMFVY---FG--- 368

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG F  +      P   S  IA+S  + A++AE +R G+ +V  GQ EAA +LG+++ + 
Sbjct: 369 LGLFVNL------PALTSGIIAISLNSGAYVAEYIRGGINSVDVGQTEAARSLGMSNGET 422

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+++I P L ++++ L+K+SS+   +G  +L+     + + T + +  I++ 
Sbjct: 423 MRYVVLPQALKNIWPSLGNEFITLIKDSSIVSIIGVTELIYQSNIVRSDTYRGVAPIVVI 482

Query: 371 MFIYLSLSIMIALFMN 386
           M +Y  L+   +  +N
Sbjct: 483 MVLYFILTFTASRILN 498


>gi|325841208|ref|ZP_08167333.1| putative arginine ABC transporter, permease protein ArtQ
           [Turicibacter sp. HGF1]
 gi|325490065|gb|EGC92411.1| putative arginine ABC transporter, permease protein ArtQ
           [Turicibacter sp. HGF1]
          Length = 233

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 21/198 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG VLS  A      F     +  PL+     L FG+P L        LH   P  G  
Sbjct: 53  MLGKVLSKLADAYVAFF-----RGTPLMIQLFILWFGVPQL--------LHTRYPSFGW- 98

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  +S EF+   IAL+  + A+++EI R+G+ AV +GQ EA  +LGL+ ++  + V
Sbjct: 99  -------ISAEFLVGAIALAINSGAYVSEIFRAGIQAVDKGQFEAGRSLGLSEKQTLKHV 151

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+++I+P L ++++ ++K S++   +G  DL+     I   T  A  + ++   IY
Sbjct: 152 ILPQAVKNILPALGNEFVVIIKESAIVSVIGLRDLMYNSDMIQAATFNAFGVYVVAAVIY 211

Query: 375 LSLSIMIALFMNRLNAKI 392
             L+   +  ++ L  ++
Sbjct: 212 FILTASCSKLLSVLEGRL 229


>gi|239940213|ref|ZP_04692150.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|239986701|ref|ZP_04707365.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
 gi|291443643|ref|ZP_06583033.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|291346590|gb|EFE73494.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
          Length = 292

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 119/225 (52%), Gaps = 24/225 (10%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFLIFGL 232
           RGL    LT+   A + V  F LG +L++   RLS +   +        LY ST      
Sbjct: 79  RGL---WLTLWLTAVVMVLGFALGALLAVL--RLSGNPVLQAVSWGYVWLYRST------ 127

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGL 289
           P LV +   + +    P       +G STVS   P  +++ I L+ + AA+ AE+VR G+
Sbjct: 128 PILVQLLFWFNIGALYP-----QILGVSTVSLLGPVAIAV-IGLTLHEAAYAAEVVRGGI 181

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V RGQ+EAA +LGL   +  R ++LPQAMRSI+PP  +  +  LK +S+   +   DL
Sbjct: 182 LSVERGQIEAAQSLGLGPWRRFRRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDL 241

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK 391
           +     + ++T Q I ++L+    Y +++ ++++   ++ R  A+
Sbjct: 242 LYSVQLVYHRTYQVIPLLLVATIWYAAVTTLLSIGQRYVERYYAR 286


>gi|254464809|ref|ZP_05078220.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
 gi|206685717|gb|EDZ46199.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
          Length = 366

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 110/211 (52%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S  LG++L+L      RH+     KA+ + +I   L+ G+P   LI + +      P+
Sbjct: 171 IVSIPLGVLLAL-----GRHYGSPAVKAICVAFIE--LVRGVP---LITILFMASVMMPL 220

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+    V    + + I +  +++A++AE+VR GL A+P+GQ EA++ALG++  + 
Sbjct: 221 -----FLPPDLVINNLLRIQIGMILFSSAYMAEVVRGGLQAIPKGQTEASLALGVSPART 275

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT--GQAIEII 367
              V++PQA+R ++PPL  + + L K++SL + VG  D +  V G  ++    G   E  
Sbjct: 276 IIFVVVPQALRHVLPPLIGRCIALFKDTSLVIIVGLLDFLGMVRGAALDPEWLGFQAEAY 335

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   F+Y  +   ++L+   L  +     K+
Sbjct: 336 VFAAFVYWLICYSLSLYGRALERRGPAGSKR 366


>gi|149191356|ref|ZP_01869609.1| ABC-type amino acid transport system, permease component [Vibrio
           shilonii AK1]
 gi|148834835|gb|EDL51819.1| ABC-type amino acid transport system, permease component [Vibrio
           shilonii AK1]
          Length = 365

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 60/83 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMGLIVLPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ L K++SL + +G  D++ +G
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIG 317



 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           G + T  +A  G+I +  IG  +  GR S   ++  IC VY+EV+R +P + V+F
Sbjct: 157 GLLVTLIIALVGIIVSLPIGVALALGRRSEMPIIRSICTVYIEVWRGVPLITVLF 211


>gi|118593286|ref|ZP_01550671.1| putative amino-acid transport system permease abc transporter
           protein [Stappia aggregata IAM 12614]
 gi|118434177|gb|EAV40833.1| putative amino-acid transport system permease abc transporter
           protein [Stappia aggregata IAM 12614]
          Length = 226

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA + G+T R+A    +LPQA R  +P
Sbjct: 89  FPAALIGFTLNVGAYSSEIIRAAISSVPKGQWEAAFSTGMTWRQAMLRTILPQAGRVAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL++S ++A   
Sbjct: 149 PLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLAMSSVLAWLQ 208

Query: 386 NRLNAKIA 393
            RL  + A
Sbjct: 209 ERLEVRFA 216


>gi|121593038|ref|YP_984934.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|222109806|ref|YP_002552070.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           ebreus TPSY]
 gi|120605118|gb|ABM40858.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Acidovorax sp. JS42]
 gi|221729250|gb|ACM32070.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax ebreus TPSY]
          Length = 223

 Score = 80.1 bits (196), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E +S  +    + AA+ +EI+R+G+ ++PRGQ+ A  ALG+T+ +  RLV+LPQ
Sbjct: 87  GRPIGAE-VSAVVTFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  D++          G+ IE  L    +Y  L 
Sbjct: 146 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEIAGKNYGRPIEAYLAAAVVYFILC 205

Query: 379 IMIALFMNRLNAKIAL 394
             ++  + RL+ KIA+
Sbjct: 206 YALSWLVKRLHKKIAI 221


>gi|319957436|ref|YP_004168699.1| amino acid ABC transporter membrane protein 2, paat family
           [Nitratifractor salsuginis DSM 16511]
 gi|319419840|gb|ADV46950.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Nitratifractor salsuginis DSM 16511]
          Length = 362

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 74/125 (59%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA++AE +RSG  A+P+GQ EAA ALGL + +   LV+LPQA++  IP L   
Sbjct: 233 IGITLFEAAYVAENIRSGFQAIPKGQYEAADALGLGYWQKMALVILPQAIKVTIPNLVGT 292

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387
           +++L K++SL + +G  DL+++     N     G   E  +   F++   +  ++++  R
Sbjct: 293 FISLFKDTSLVMIIGLFDLLAMVNVTANDRDWLGMDTEGYVFVAFVFWIFTFSMSMYSKR 352

Query: 388 LNAKI 392
           L  K+
Sbjct: 353 LEKKL 357


>gi|318061946|ref|ZP_07980667.1| ABC transporter permease [Streptomyces sp. SA3_actG]
 gi|318078798|ref|ZP_07986130.1| ABC transporter permease [Streptomyces sp. SA3_actF]
          Length = 345

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 37/213 (17%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF-- 230
           RGL    LT+   A + V  FVLG +L+L   R+S +         P+L ++S+  I+  
Sbjct: 123 RGLG---LTLWLTALVMVLGFVLGTLLAL--GRMSSN---------PVLSWVSSGYIWFF 168

Query: 231 -GLPTLVLI-------ALKYQLHFDKPVLGQF------NFIGGSTVSPEFMSLYIALSCY 276
              P LV +       AL  QL    P   +F      N +G  TV+       + L+ +
Sbjct: 169 RSTPILVQLLFWFNIGALYPQLGLGIPFGPEFVTVKTVNLLGPVTVA------VLGLTLH 222

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AE+VR GL++V RGQ+EAA +LGL+  +  R ++LPQAMR+I+PP  +  +  LK
Sbjct: 223 EAAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWRRLRRIVLPQAMRAIVPPAGNMLIGALK 282

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            +S+   +   DL+     + ++T Q I ++L+
Sbjct: 283 GTSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLV 315



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 3/88 (3%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +D    +A+L G   T WL    M+   ++GTL+  GR+S+N +++W+   Y+  FR+ P
Sbjct: 113 ADYFTTSAVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSSNPVLSWVSSGYIWFFRSTP 172

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
            LV + F +   +  L  P   + +PFG
Sbjct: 173 ILVQLLFWFN--IGAL-YPQLGLGIPFG 197


>gi|296111216|ref|YP_003621598.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832748|gb|ADG40629.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 477

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP +  I +                       P F +  I L   
Sbjct: 324 RGLPLMVLAFFIYIGLPGVTGIKI-----------------------PAFTAGIITLILN 360

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    VR G  AV RGQMEAA +LGL +  A R V++PQ +R ++P   +Q++  LK
Sbjct: 361 EGAYTGAFVRGGFEAVDRGQMEAARSLGLPYGHAMRKVIMPQGLRIMVPSFINQFIITLK 420

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +  Q   +  I   +YL +  ++    N +  KI
Sbjct: 421 DTSILSAIGLLELTQTGTLIVARNSQGFRVWAIIAIMYLVVITLLTWLSNWVEKKI 476


>gi|237807993|ref|YP_002892433.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500254|gb|ACQ92847.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 365

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 63/98 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G     + +   I +  + +A++AE++R GL A+P+GQ EAA ALGL + K+  L++
Sbjct: 220 FLSGEVSMDKLLRAMIGIILFESAYVAEVIRGGLQAIPKGQYEAAKALGLNYWKSMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +PQA++  IP L + ++ L K++SL   +G  DL++V 
Sbjct: 280 MPQALKLTIPSLVNTFIELFKDTSLVTIIGLFDLLAVA 317


>gi|220924348|ref|YP_002499650.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948955|gb|ACL59347.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 230

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 92/164 (56%), Gaps = 5/164 (3%)

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLI 290
           +L L+ + +  +F  P +GQ+  + G+    +   F S  +  + + AA+ +EI+R+G+ 
Sbjct: 67  SLPLVLVIFWFYFLVPYIGQW--LTGADRPIQVGAFTSSLVTFTLFEAAYFSEIMRAGIQ 124

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ  AA ALGLT+ ++   ++LPQA R+++P L +Q + L +++SL   +   D +
Sbjct: 125 SIPKGQSAAASALGLTYWQSMSNIILPQAFRNMLPVLLTQTIVLFQDTSLVYVLSITDFL 184

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                +  + G+ +E+ L    +Y  +    +  + RL  +IA+
Sbjct: 185 GAASKVAQRDGRLVEMYLFAAVVYFVICFFASTLVRRLQRRIAI 228


>gi|229170389|ref|ZP_04298062.1| Amino acid ABC transproter, permease [Bacillus cereus AH621]
 gi|228613086|gb|EEK70238.1| Amino acid ABC transproter, permease [Bacillus cereus AH621]
          Length = 230

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL+L ++    ++ L  
Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEK 208

Query: 391 KIALKEKK 398
           ++  KE  
Sbjct: 209 RLQRKENN 216


>gi|206562321|ref|YP_002233084.1| putative amino acid ABC transporter permease [Burkholderia
           cenocepacia J2315]
 gi|198038361|emb|CAR54318.1| putative amino acid ABC transporter system permease [Burkholderia
           cenocepacia J2315]
          Length = 216

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 20/221 (9%)

Query: 177 SFPTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           S P L       +F+   SF LG  L L A  L+R    +  + +   Y+S F   G P 
Sbjct: 8   SLPLLESAVTMTVFLGLASFALGSALGL-AVALARVSSIRFLRGIAFAYVSIFR--GTPL 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y   F  P  G        T+ P   +L +AL+ ++AA+++E  RSG+ AV R
Sbjct: 65  LVQILLIY---FGLPRYG-------ITLDPVPAAL-LALTLFSAAYLSENFRSGINAVDR 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG+ + K    V+LPQ +R  IPP+ S+ + L+K++SLA  +   +L  V  
Sbjct: 114 GQWEAAHSLGMNYWKMMWRVILPQGLRIAIPPVGSRMIALIKDTSLASTITVVELTRVAD 173

Query: 355 TIINQTGQAIEIILIWMFIYLS----LSIMIALFMNRLNAK 391
            +   T + +E+ L+   IY      L+I+  +F  R++ +
Sbjct: 174 QVGASTFRYMEMFLMVGLIYWVINQILTIVQTIFEGRVSRR 214


>gi|300933297|ref|ZP_07148553.1| putative ABC transport system, permease protein [Corynebacterium
           resistens DSM 45100]
          Length = 310

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 59/82 (71%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L+   AA++AEIVR+G+ AVP GQ EA+ ALG+T  +  R  +LPQAMR IIP
Sbjct: 148 FLLAVVGLALNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWWQNMRRTVLPQAMRIIIP 207

Query: 326 PLTSQYLNLLKNSSLAVAVGFA 347
           P  +++++LLK +SL +A+ +A
Sbjct: 208 PTGNEFISLLKTTSLVIAIPYA 229


>gi|169343527|ref|ZP_02864526.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens C str. JGS1495]
 gi|169298087|gb|EDS80177.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens C str. JGS1495]
          Length = 519

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF  +LG+++ + A  + R +     K +  +YIS F   G P LV + L   L+F  P 
Sbjct: 326 VFGMILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 378

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 I        F +  I L    +A+IAEI+RS + A+ +GQMEA ++LG+T  +A
Sbjct: 379 ----QVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTRAQA 434

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            + V+LPQA R  IPPL + +++ +K SSLA  +G  +L++
Sbjct: 435 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 475


>gi|83646476|ref|YP_434911.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83634519|gb|ABC30486.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 222

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 74/128 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+ AEI+R+ + ++ RGQ EAA ++G+T  +     +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYAAEILRAAIASIDRGQWEAAASIGMTRTQTLYRTILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ ++A   NRL A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWVLASVLAHLQNRLEA 213

Query: 391 KIALKEKK 398
           ++ L EK 
Sbjct: 214 RVNLHEKD 221



 Score = 39.7 bits (91), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    I+G  +   RLS+ + + W  RVY+  FR  P LV +F +
Sbjct: 16  LLKGAGYTVGLSLGGMFFGLILGFTLAMMRLSSFRALDWTARVYISFFRGTPLLVQLFMI 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|288922650|ref|ZP_06416826.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EUN1f]
 gi|288346008|gb|EFC80361.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EUN1f]
          Length = 285

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 30/178 (16%)

Query: 182 TMDTNAKIFVFSFVLGIVLSL--FATRLSRHFHE----KTGKALPLLYISTFLIFGLPTL 235
           T+   A   VF+  LG+ L+    +TR + H       +T + LPLL +  F   GLP L
Sbjct: 70  TLRAAATGMVFAVALGVALAFARLSTRPAVHVPAAALVETLRGLPLLMLIFFAFLGLPAL 129

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                                  G  +S  F +L + L+ Y  A ++EI R+G++++ RG
Sbjct: 130 -----------------------GVDLS-AFWALVLGLTAYNGAVLSEIFRAGVLSIDRG 165

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           Q EAA ALGL   +   L+  PQA+R + P L SQ + LLK++SL   +G+ +L+  G
Sbjct: 166 QTEAAAALGLRGTQIFALIQFPQAVRRMSPTLVSQLVTLLKDTSLGFVIGYTELLRQG 223


>gi|168205901|ref|ZP_02631906.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens E str. JGS1987]
 gi|182624018|ref|ZP_02951806.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens D str. JGS1721]
 gi|170662631|gb|EDT15314.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens E str. JGS1987]
 gi|177910911|gb|EDT73265.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens D str. JGS1721]
          Length = 519

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF  +LG+++ + A  + R +     K +  +YIS F   G P LV + L   L+F  P 
Sbjct: 326 VFGMILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 378

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 I        F +  I L    +A+IAEI+RS + A+ +GQMEA ++LG+T  +A
Sbjct: 379 ----QVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTRAQA 434

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            + V+LPQA R  IPPL + +++ +K SSLA  +G  +L++
Sbjct: 435 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 475


>gi|39935628|ref|NP_947904.1| polar amino acid ABC transport permease AapM-1 [Rhodopseudomonas
           palustris CGA009]
 gi|39649481|emb|CAE28003.1| polar amino acid ABC transport permease protein aapM-1
           [Rhodopseudomonas palustris CGA009]
          Length = 501

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      M + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T L++
Sbjct: 354 FLPGNFTIDNLMRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKITGLIV 413

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA+R +IP L + ++ L K++SL   V   DL+ 
Sbjct: 414 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 449


>gi|283954479|ref|ZP_06371999.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283794096|gb|EFC32845.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 250

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 60/80 (75%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG++AVP+GQ EA+ + G T+ +    +++PQ +R I+PP+T+Q
Sbjct: 122 LGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYIQQMYYIIVPQTIRIILPPMTNQ 181

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            +NL+KN+S+ + VG A+L+
Sbjct: 182 MVNLIKNTSVLLIVGGAELM 201



 Score = 43.9 bits (102), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GFV T  ++   ++ ATI GT+ G    S  K++    R+YVE+F+N+P ++ IFFL+
Sbjct: 47  GFVYTLEVSVLALLIATIFGTIGGVMATSRFKVIRAYTRIYVELFQNVPLVIQIFFLF 104


>gi|300768251|ref|ZP_07078156.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|300494315|gb|EFK29478.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
          Length = 491

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 107/196 (54%), Gaps = 17/196 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           F F++GI+L+L   R+++    KT  + L   Y+    I G P +V +   Y   F    
Sbjct: 303 FGFIIGILLAL--ARMAKGNPLKTAIRWLATAYVE--FIRGTPMMVQVMFVY---FG--- 352

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG F  +      P   S  IA+S  + A++AE +R G+ +V  GQ EAA +LG+++ + 
Sbjct: 353 LGLFVNL------PALTSGIIAISLNSGAYVAEYIRGGINSVDVGQTEAARSLGMSNGET 406

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+++I P L ++++ L+K+SS+   +G  +L+     + + T + +  I++ 
Sbjct: 407 MRYVVLPQALKNIWPSLGNEFITLIKDSSIVSIIGVTELIYQSNIVRSDTYRGVAPIVVI 466

Query: 371 MFIYLSLSIMIALFMN 386
           M +Y  L+   +  +N
Sbjct: 467 MVLYFILTFTASRILN 482


>gi|15924848|ref|NP_372382.1| glutamine-binding periplasmic protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927432|ref|NP_374965.1| hypothetical protein SA1675 [Staphylococcus aureus subsp. aureus
           N315]
 gi|156980174|ref|YP_001442433.1| hypothetical protein SAHV_1843 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|13701651|dbj|BAB42944.1| SA1675 [Staphylococcus aureus subsp. aureus N315]
 gi|14247630|dbj|BAB58020.1| similar to glutamine-binding periplasmic protein [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|156722309|dbj|BAF78726.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|285817538|gb|ADC38025.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus aureus 04-02981]
          Length = 441

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 80/130 (61%), Gaps = 16/130 (12%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 316 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 375

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEI-----ILIWMFIYLSLSIMIALF 384
           ++ L+K SS+   +G      VG  + N Q  Q I       +L+   +Y  L+ ++   
Sbjct: 376 FVTLIKESSIVSTIG------VGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRI 429

Query: 385 MN----RLNA 390
           MN    RLNA
Sbjct: 430 MNMIEGRLNA 439



 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 231 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 290

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 291 VQVFIVF 297


>gi|304395813|ref|ZP_07377696.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357107|gb|EFM21471.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 219

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 90  FSAAVVTIMINSGAYIAEITRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            R+  ++ +
Sbjct: 210 RRIEKRVKI 218


>gi|239907731|ref|YP_002954472.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239797597|dbj|BAH76586.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 270

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 80/133 (60%), Gaps = 4/133 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+ ++  I++S    A++ E+ R+G+ A+  GQ EAA +LG T  +    V+LPQA R+I
Sbjct: 136 PDLLAAVISMSVCYGAYMGEVFRAGITAIAVGQTEAARSLGFTRSQTMYYVILPQAWRTI 195

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379
           +PP+ ++++ LLK++SL   +G ADL+  G    +++    E    + ++++ I L LS 
Sbjct: 196 LPPVGNEFIALLKDTSLVSILGVADLLRRGREFASESFLYFETFTMVAVVYLIITLILSK 255

Query: 380 MIALFMNRLNAKI 392
           +++    RL+  +
Sbjct: 256 LVSFMEERLSHHV 268



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +  S +  A +IG + G GR+S NK +  +   YVEV R +P LV +F++Y +
Sbjct: 69  GILVTFQVTVSAIALALVIGLITGLGRISRNKYINLVASTYVEVVRGVPLLVQLFYIYYA 128

Query: 152 VLSVLPIPD 160
           +  V+ +PD
Sbjct: 129 LGRVVHVPD 137


>gi|72161212|ref|YP_288869.1| amino acid ABC transporter permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thermobifida fusca YX]
 gi|71914944|gb|AAZ54846.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thermobifida fusca YX]
          Length = 224

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 27/165 (16%)

Query: 191 VFSFVLGIVLSLFATRLS--------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +FSF+LG++L+  A R+S           + +T +  PL  +  F   GL + + ++L  
Sbjct: 27  LFSFILGVILT--AMRVSPIGLLRGVSTVYVETVRNSPLTLVLLFCGLGLNSALGLSLAD 84

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            + +D                  F    I LS YTA F++E +RSG+  +P GQ EAA +
Sbjct: 85  SVAWDV-----------------FWWAVIGLSAYTACFVSETLRSGINTIPVGQAEAARS 127

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           LGLT  +  RL+++PQA+R++I PL S  + L+KN+++A   G  
Sbjct: 128 LGLTFTQILRLIIIPQALRTVIGPLGSVLIALIKNTTVASVAGLG 172


>gi|123442745|ref|YP_001006722.1| putative amino-acid ABC transporter (permease) [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122089706|emb|CAL12558.1| putative amino-acid ABC transporter (permease) [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|318605288|emb|CBY26786.1| cystine ABC transporter, permease protein [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 220

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F   LG +L++   RLSR         LPL  +S F +       LIA  + +++  P  
Sbjct: 32  FGLALGFMLAMM--RLSRF--------LPLSLLSRFYVSIFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +L I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDPMPAAL-IGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V+LPQA R+ +PPL + ++ L+K++SLA  +   +L      + ++T +   + L   
Sbjct: 134 YRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLVTSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   NRL A +  ++++
Sbjct: 194 LIYWIMATLLSALQNRLEAHVNRQDQE 220


>gi|225350854|ref|ZP_03741877.1| hypothetical protein BIFPSEUDO_02428 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158310|gb|EEG71552.1| hypothetical protein BIFPSEUDO_02428 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 327

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I   +V   F + ++ L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSMIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++  
Sbjct: 204 RVVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLN 389
             YL ++ ++ +  +RL 
Sbjct: 264 IWYLVITSILMVLQSRLE 281


>gi|161506724|ref|YP_001576674.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|160347713|gb|ABX26387.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
          Length = 537

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++
Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHSQKMWHIILPQAIKNCLPSITNE 450

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  
Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEK 510

Query: 391 KIALKE 396
           K+  K+
Sbjct: 511 KLEGKK 516



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E  +     T+   Y   I+ G   T  LA  G +    IG L+G           
Sbjct: 280 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLIGIVRTIPTPTTR 339

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A  +V W+  VYVE+FR  P +V    +Y
Sbjct: 340 GKRWALNVVKWLLSVYVEIFRGTPMMVQAAVIY 372


>gi|253991464|ref|YP_003042820.1| amino acid ABC transporter extracellular solute-binding protein
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782914|emb|CAQ86079.1| similar to extracellular solute-binding protein-amino acid abc
           transporter [Photorhabdus asymbiotica]
          Length = 233

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 16/206 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVL 251
           +F LGI+L  F   L R +  K   A+   Y+  +LI G P LV L  + Y L      L
Sbjct: 31  TFTLGIILG-FIVALIRLYGPKPFVAVAKFYV--WLIRGTPLLVQLFLIFYALPSVGITL 87

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G F             S  I  +    A+ +E++R+ L++VP+GQ EAA ++G++  ++ 
Sbjct: 88  GAFT------------SAVIGFTLNIGAYTSEVIRATLLSVPKGQWEAAYSIGMSWTQSL 135

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA R  IPPL++ +++L+K++SLA  +   +L      I   T Q + +     
Sbjct: 136 RRIILPQAARIAIPPLSNTFISLVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAA 195

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            IYL +S +++    RL  K + K  
Sbjct: 196 IIYLIISSVLSSLQARLEKKFSQKSD 221


>gi|315644843|ref|ZP_07897972.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315279785|gb|EFU43086.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 219

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 80/135 (59%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V P F S  + L  YTAAFIAE +R+G+ AVP GQ EAA + GL++ +  R ++LPQ
Sbjct: 83  GVPVDP-FTSGTLGLMVYTAAFIAEAIRAGIQAVPSGQTEAARSSGLSYVQNMRYIILPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++ ++P + +Q +NL+KNSS+   +   DL+     I   T + I +       YL L+
Sbjct: 142 AVKIVLPAIGNQLINLVKNSSVLGVIAGLDLMYYADLINLSTFKGIPVYTFVALFYLLLT 201

Query: 379 IMIALFMNRLNAKIA 393
           + ++L ++ +  + A
Sbjct: 202 VPLSLAVHYMERRFA 216


>gi|192291212|ref|YP_001991817.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
 gi|192284961|gb|ACF01342.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
          Length = 501

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      M + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T L++
Sbjct: 354 FLPGNFTIDNLMRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKITGLIV 413

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA+R +IP L + ++ L K++SL   V   DL+ 
Sbjct: 414 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 449


>gi|139439418|ref|ZP_01772859.1| Hypothetical protein COLAER_01879 [Collinsella aerofaciens ATCC
           25986]
 gi|133775197|gb|EBA39017.1| Hypothetical protein COLAER_01879 [Collinsella aerofaciens ATCC
           25986]
          Length = 248

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 3/125 (2%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++ +  Y AA+I+E++R+G+ AVPRGQMEAA + G T  +A   ++LPQ  + I+PPL +
Sbjct: 107 FLGVGLYHAAYISEVIRTGIEAVPRGQMEAAQSQGFTRAQAYWYIVLPQTFKIILPPLCN 166

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMN 386
           Q LNL+KN+S+   V   DL+      ++  G     I   L++  I   L++++     
Sbjct: 167 QALNLVKNTSVLALVAGGDLMYRSDNFVSLYGYLQGYIVCCLMYFIICFPLAMLVQWLER 226

Query: 387 RLNAK 391
           R   +
Sbjct: 227 RSKER 231


>gi|116254361|ref|YP_770199.1| transmembrane component of transporter [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115259009|emb|CAK10118.1| putative transmembrane component of transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 226

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 14/203 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+ L L AT + R F      A+   Y+  ++I G P LV +   + + +  P 
Sbjct: 28  LLSFAFGLTLGL-ATAIGRLFGPMPLSAVARFYV--WVIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A
Sbjct: 82  LG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
               +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T + + + +  
Sbjct: 134 MSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IYL LS +++    RL  + A
Sbjct: 194 ALIYLVLSSVLSQLQVRLERRFA 216


>gi|309790934|ref|ZP_07685476.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
 gi|308227048|gb|EFO80734.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
          Length = 266

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 12/215 (5%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A  F+F+ + G+ L L      R       + L + YI    I G+P LVLI   
Sbjct: 62  TLYVTAVSFIFALIFGLFLGL-----GRVASNPIIRNLTITYIE--FIRGVPMLVLI--- 111

Query: 242 YQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           + + F   P+  +   +  + +S    ++ IAL     A+IAEI R+G+ ++ RGQ EAA
Sbjct: 112 FTISFAVVPLFAESFGLANNAISLTTRAI-IALVLIYGAYIAEIFRAGIESISRGQSEAA 170

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG++  +A   V+LPQA+R+++P L +  + LLK++SL   +G  ++  V    ++ +
Sbjct: 171 RSLGMSRAQAMFYVILPQAVRNVMPALGNDLIALLKDTSLVSVLGVREMTQVARLSVSTS 230

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +  E   I    YLS++++++L +  L  ++  +
Sbjct: 231 FRYEETYFILTLFYLSMTLVLSLILQWLQRRVGAR 265



 Score = 36.2 bits (82), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           IL G   T ++     I A I G  +G GR+++N ++  +   Y+E  R +P LV+IF
Sbjct: 55  ILQGLGTTLYVTAVSFIFALIFGLFLGLGRVASNPIIRNLTITYIEFIRGVPMLVLIF 112


>gi|229591529|ref|YP_002873648.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229363395|emb|CAY50556.1| putative permease component of ABC transporter [Pseudomonas
           fluorescens SBW25]
          Length = 258

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 74/127 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A++AEI+R+G+ AV +GQ EA  +LG+   K  R ++LPQA R I+PPL ++
Sbjct: 109 IALGLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNE 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +  +LKN++L   +G  +L+     I + T +  E+ L+    +L+L+ +   F   L  
Sbjct: 169 FNVMLKNTTLVSVIGVQELLLSTQMITSATFRVFELYLVVALYFLTLTTLWGFFQRWLET 228

Query: 391 KIALKEK 397
           + +  ++
Sbjct: 229 RFSQSDR 235


>gi|292670308|ref|ZP_06603734.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas noxia ATCC 43541]
 gi|292648039|gb|EFF66011.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas noxia ATCC 43541]
          Length = 214

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 18/174 (10%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +IF  +  L + L LFA   RLSR F   +     LL +  +++ G P ++ +   Y   
Sbjct: 20  EIFCVTLALSLPLGLFAALGRLSR-FRILSR----LLEVYIWIMRGTPLMLQLLFVY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P++G         + P+  +  +A     AA+ AEI RSG+ AVPRGQ EAA  LG+
Sbjct: 72  FALPMIG--------IMLPDIAAALLAFVLNYAAYFAEIFRSGIQAVPRGQFEAARVLGM 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +     R ++LPQ +R  +PP++++ +NL+K++SL   +   DL+ V  TI+ +
Sbjct: 124 SAPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQR 177


>gi|291616399|ref|YP_003519141.1| GlnQ [Pantoea ananatis LMG 20103]
 gi|291151429|gb|ADD76013.1| GlnQ [Pantoea ananatis LMG 20103]
 gi|327392843|dbj|BAK10265.1| glutamine transport ATP-binding protein GlnQ GlnQ [Pantoea ananatis
           AJ13355]
          Length = 519

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 107/210 (50%), Gaps = 22/210 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST----FLIFGLPTLVLIALKYQLHFDK 248
           S + G +L+L   + SRH         PLL +      +L   LP LVL+   Y L    
Sbjct: 47  SIIAGFILAL--AKQSRH---------PLLTLPARFYIWLFRSLPLLVLLIFVYNLPQAV 95

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P          + +S  F + +IAL+   +A+IAEI R GL+++PRGQ EAA ALGL + 
Sbjct: 96  PATS-------AILSDPFWAGFIALTICESAYIAEIHRGGLLSIPRGQSEAARALGLRYA 148

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
                +++PQA+R  +P L ++Y+ ++K +SL   +   +++ VG  + +Q    +E + 
Sbjct: 149 GIQWRIIIPQALRVALPALANEYIAIVKLTSLVSVISLTEILMVGQRLYSQNFLVMETMA 208

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F Y+ +  +    + +L   + + +++
Sbjct: 209 AVAFYYVLIVTVFDFLLKQLERYLDVTQRQ 238


>gi|229009851|ref|ZP_04167071.1| Amino acid ABC transproter, permease [Bacillus mycoides DSM 2048]
 gi|228751469|gb|EEM01275.1| Amino acid ABC transproter, permease [Bacillus mycoides DSM 2048]
          Length = 230

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 75/128 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL+L ++    ++ L  
Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEK 208

Query: 391 KIALKEKK 398
           ++  KE  
Sbjct: 209 RLQRKENN 216


>gi|328887001|emb|CCA60240.1| putative glutamate transport protein [Streptomyces venezuelae ATCC
           10712]
          Length = 221

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 88/151 (58%), Gaps = 5/151 (3%)

Query: 251 LGQFNFIGGSTVSPEFMSL-----YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           LG F  +G    +  F ++      + L+ YT+AF+ E +RSG+  VP GQ+EAA A+GL
Sbjct: 71  LGLFQTLGVDMGADRFTTINFRLAVLGLTAYTSAFVCEALRSGINTVPLGQVEAARAIGL 130

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RL++LPQA RS++ PL +  + L KN+++A A+G A+   +   +I    Q I 
Sbjct: 131 NFPQVLRLIVLPQAFRSVVGPLANVLIALTKNTTVAAAIGVAEAALLMREMIENEAQLIL 190

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I  I+ F ++ L++   LF+  +  K+A+K 
Sbjct: 191 ISTIFAFGFICLTLPTGLFLGWVAKKVAVKR 221


>gi|331698685|ref|YP_004334924.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
 gi|326953374|gb|AEA27071.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
          Length = 336

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 115/233 (49%), Gaps = 32/233 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLV 236
           +T+   A   VF  + G+VL+L   RLSR          P+L + ++    L   +P +V
Sbjct: 91  ITLKVTALSAVFGLLGGVVLAL--CRLSRS---------PVLQLVSWGYVWLFRSVPLIV 139

Query: 237 LIALKYQLHFDKPVLG----------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           L+   Y      P LG          QF+    + ++ E +   + LS   AA+ AE+VR
Sbjct: 140 LLLFLYNFSALYPSLGLGVPFGPTFVQFD---ETALATEIVIAVVGLSLNEAAYAAEVVR 196

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+++V +GQ EAA ALGL  R   R ++ PQA+RSI+P   +Q + L+K++SL   V  
Sbjct: 197 GGILSVDQGQHEAAAALGLPRRYQFRRIVAPQALRSIVPNYVNQLIGLIKSTSLVFYVSL 256

Query: 347 ADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            DL     S+G T        + +  +W  I  S+  ++  ++ R  A+ +++
Sbjct: 257 LDLFGQVQSLGSTYPGDIVPLLMVATVWYVILTSIVSVVQYYVERRFARGSVR 309


>gi|56697223|ref|YP_167588.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
 gi|56678960|gb|AAV95626.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
          Length = 375

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 110/211 (52%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S  LG++L+L      RH+     KA+ + +I   L+ G+P   LI + +      P+
Sbjct: 180 IVSIPLGVLLAL-----GRHYGSPAVKAICVAFIE--LVRGVP---LITILFMASVMMPL 229

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+    V    + + I +  +++A++AE+VR GL A+P+GQ EA++ALG++  + 
Sbjct: 230 -----FLPPDLVINNLLRIQIGMILFSSAYMAEVVRGGLQAIPKGQTEASLALGVSPART 284

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT--GQAIEII 367
              V++PQA+R ++PPL  + + L K++SL + VG  D +  V G  ++    G   E  
Sbjct: 285 IIFVVVPQALRHVLPPLIGRCIALFKDTSLVIIVGLLDFLGMVRGAALDPEWLGFQAEAY 344

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   F+Y  +   ++L+   L  +     K+
Sbjct: 345 VFAAFVYWLICYSLSLYGRALERRGPAGSKR 375


>gi|311695085|gb|ADP97958.1| amino acid ABC transporter, permease protein [marine bacterium
           HP15]
          Length = 362

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 3/130 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE++R GL A+PRGQ EAA ALGL + +   LV+LPQA++ +IP + + 
Sbjct: 232 IGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMGLVILPQALKMVIPGIVNT 291

Query: 331 YLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNR 387
           +++L K+++L + +G  D++ +V  T+ +   Q  AIE  +   F +      I+ +   
Sbjct: 292 FISLFKDTTLVLIIGLFDILGTVQSTVTDPAWQNVAIEGYVFVAFCFWVFCFGISRYSQN 351

Query: 388 LNAKIALKEK 397
           L  K+    K
Sbjct: 352 LERKLDTGHK 361



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA+ G+I +  IG L+  GR S   ++  IC V++EV+R +P + V+F    S
Sbjct: 154 GLMLTLILAYIGIIASLPIGILLALGRRSDMPIIRGICVVFIEVWRAVPLITVLFM--AS 211

Query: 152 VLSVLPIPD 160
           V+  L +P+
Sbjct: 212 VMLPLFLPE 220


>gi|168334973|ref|ZP_02693091.1| polar amino acid ABC transporter, inner membrane subunit
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 235

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 82/135 (60%), Gaps = 2/135 (1%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  M   IA    + A+++E++R G+ ++ RGQ EA  +LGL++ +   L++LPQA R +
Sbjct: 102 PRVMVGGIAFGINSGAYMSEVIRGGITSIDRGQTEAGRSLGLSYFQTMHLIILPQAFRQM 161

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIA 382
           +P L ++++NL+K +++   +G  DL+     +I+ T    EI LI +  IYL+++ ++ 
Sbjct: 162 LPSLVNEFINLIKETAIIGFIGGMDLMKAANILISTT-YNFEIPLIMVALIYLTITSILT 220

Query: 383 LFMNRLNAKIALKEK 397
            FM  +  K++ + +
Sbjct: 221 YFMRGIENKLSKQNR 235



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA-GRLSAN--------KLVAWICRVY 132
           D  Y   IL G  NT  L+    I    IG +V   G L +         K++  I +VY
Sbjct: 16  DGGYIFTILDGLYNTLLLSLIATIIGLAIGLVVAVIGMLESKGTIENSILKVLKIIAKVY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           V++ R  P +V + FL+  VL+ L +P
Sbjct: 76  VDIIRGTPAVVQVSFLWLVVLAPLNLP 102


>gi|323441690|gb|EGA99335.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           O46]
          Length = 467

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 342 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 401

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 402 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 461

Query: 387 RLNA 390
           RLNA
Sbjct: 462 RLNA 465



 Score = 43.9 bits (102), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKVISWIASIYIEILRGTPML 316

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 317 VQVFIVF 323


>gi|229083652|ref|ZP_04215977.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-44]
 gi|228699670|gb|EEL52330.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-44]
          Length = 230

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 77/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+++  A R ++LPQA+R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQALRLSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     + +E  ++    YL+L ++    ++ L  
Sbjct: 149 FVIGLKDSSLVAYVGMSELWGSGLSIAAGNFKQLETYIVVSAYYLALVLLFTYLVSLLEK 208

Query: 391 KIALKE 396
           ++  K+
Sbjct: 209 RLQRKQ 214


>gi|91786312|ref|YP_547264.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91695537|gb|ABE42366.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 273

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/117 (41%), Positives = 72/117 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F S  +AL+    A+ AE +RSGL+AVP+GQ+EAA +LGL+       V  PQA +  +
Sbjct: 139 DFSSACVALAFNAGAYNAEAIRSGLLAVPKGQIEAARSLGLSSFFTFIDVTFPQAFKISL 198

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           PPL +  + LLK+SSLA A+G  +L +VG  I   T Q +  ++    IYL L+ ++
Sbjct: 199 PPLVNNTVALLKDSSLAYAIGVVELTNVGNRIQAATFQPLPTLVTTAVIYLVLTTVL 255


>gi|323492218|ref|ZP_08097376.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
 gi|323313531|gb|EGA66637.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
          Length = 303

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 255 NFI-GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           NF+ G +++    +S  + +   ++A++AE+VRSGL +V +GQ EAA +LGL+     R 
Sbjct: 159 NFLFGPASLWENLLSGILCVGLLSSAYVAEVVRSGLSSVAQGQWEAADSLGLSSWAKYRY 218

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+ PQ + +I P L  Q ++L+K++S+   +   ++  VG  I N +G   EI LI    
Sbjct: 219 VIAPQVLAAITPALAGQAISLIKDTSIVSLISIQEMTFVGTEIANSSGLIFEIWLIVGLA 278

Query: 374 YLSLSIMIALFMNRLNAK 391
           Y +L + ++L   R+  +
Sbjct: 279 YFTLCMSLSLLFKRIEKR 296


>gi|291519683|emb|CBK74904.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens
           16/4]
          Length = 501

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 91/160 (56%), Gaps = 20/160 (12%)

Query: 203 FATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           F   + R  H+KTG      A+  LY++  +I G P ++ + + Y + F           
Sbjct: 316 FVVAIIRVTHDKTGGWGIANAICKLYLA--IIRGTPIMIQLLIIYYVVF----------- 362

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             +   P+ +   IA +  + A++AEI+R G++++  GQMEA  +LGLT+++    ++LP
Sbjct: 363 -AAVNVPKVLVAIIAFAINSGAYVAEIMRGGIMSIDDGQMEAGRSLGLTYKQTMISIILP 421

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           QA+++++P L +++++L+K +S+   +G  DL   GG II
Sbjct: 422 QAIKNVLPALGNEFISLIKETSICGYIGLMDLTR-GGDII 460



 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 39/211 (18%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-----ICRVYVEVF 136
           D S  T IL G  NT  +A   ++   IIG +V   R++ +K   W     IC++Y+ + 
Sbjct: 286 DDSRWTYILKGLQNTLLIALCAVLAGMIIGFVVAIIRVTHDKTGGWGIANAICKLYLAII 345

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R  P ++ +  +Y  V + + +P   +++    F  N G              +V   + 
Sbjct: 346 RGTPIMIQLLIIYYVVFAAVNVP--KVLVAIIAFAINSGA-------------YVAEIMR 390

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G ++S+   ++      + G++L L Y  T +   LP     A+K  L    P LG   F
Sbjct: 391 GGIMSIDDGQM------EAGRSLGLTYKQTMISIILPQ----AIKNVL----PALGN-EF 435

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           I  S +    +  YI L   T     +I+RS
Sbjct: 436 I--SLIKETSICGYIGLMDLTRG--GDIIRS 462


>gi|157165284|ref|YP_001466153.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Campylobacter concisus 13826]
 gi|112800385|gb|EAT97729.1| L-cystine transport system permease protein TcyB [Campylobacter
           concisus 13826]
          Length = 222

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 76/123 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA S    A+ +E VR+ +++VP+GQ EAA +LG+TH +  + ++ PQA+R  +PPL++ 
Sbjct: 97  IAFSLNVGAYASESVRAAILSVPKGQWEAATSLGMTHYQILKRIIAPQAVRISLPPLSNT 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SLA ++   D+  V   I  +T + + + ++   IYL +  ++    +RL  
Sbjct: 157 FIGLVKDTSLAASITMVDMFMVAQRIAARTFEPLILYILAALIYLVVCTLLTYLQSRLEK 216

Query: 391 KIA 393
            ++
Sbjct: 217 AVS 219


>gi|284163419|ref|YP_003401698.1| polar amino acid ABC transporter inner membrane protein
           [Haloterrigena turkmenica DSM 5511]
 gi|284013074|gb|ADB59025.1| polar amino acid ABC transporter, inner membrane subunit
           [Haloterrigena turkmenica DSM 5511]
          Length = 277

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 11/195 (5%)

Query: 208 SRHFHEKTG---KALPLLYISTFLIFGLPTLVL----IALKYQLHFDKPVLGQFNFIGGS 260
           SR F  K G   +  P+L I     + LP  ++     AL   L F   VLG   F    
Sbjct: 81  SRAFVRKFGVLLRGTPILVIMFITFYALPYEIVHDAVEALFSALDF---VLGPTPFTAAV 137

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            V   F++  +AL   +AA+ ++I R  L ++  GQMEAA ++G++  +A R V+ PQA+
Sbjct: 138 DVPGAFVAATLALGFRSAAYQSQIFRGALQSIDEGQMEAARSIGMSRLEAIRHVIAPQAL 197

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSI 379
           R  +P   +++  +LK++S+A A+G A+L+     +  Q   AI E+I+    +Y  L+ 
Sbjct: 198 RRSVPGFQNEFTIVLKDTSIAFAIGLAELLKRSEDLFTQQTTAILEVIVFISLLYFVLTF 257

Query: 380 MIALFMNRLNAKIAL 394
                ++ +N + A+
Sbjct: 258 TTNRTLDYVNNRFAI 272


>gi|260461828|ref|ZP_05810074.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785358|ref|YP_004144834.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032469|gb|EEW33734.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171246|gb|ADV14784.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 324

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 11/168 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP LV I   Y ++   P LG F     S V        +ALS  T A++ EI R+G+ 
Sbjct: 168 GLPLLVQI---YLIYLGLPQLGIFINAVPSGV--------LALSLCTGAYMTEIFRAGIQ 216

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ RGQ EA+ ++G       R ++LPQA+  IIPP+ + ++++LK+SSL   +G  +L 
Sbjct: 217 SIDRGQWEASRSMGFGFGLTMRRIILPQALPVIIPPMGNTFISMLKDSSLVSILGVWELT 276

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  T+   T Q +E+++    IY  +SI + L  +R+    A  + +
Sbjct: 277 FLARTLGQPTFQHMEMLITAAIIYWIMSICLELVQSRIERHFARSKVR 324


>gi|163858458|ref|YP_001632756.1| amino acids ABC transporter, permease protein [Bordetella petrii
           DSM 12804]
 gi|163262186|emb|CAP44488.1| amino acids ABC transporter, permease protein [Bordetella petrii]
          Length = 231

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 4/131 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF    IALS   +A+  E +RSG+ A+P  Q+EAA ++GL   +A   V+LPQA+R  +
Sbjct: 98  EFSFALIALSLNVSAYYYEDIRSGIRAIPATQVEAARSIGLGAVQALIYVVLPQAVRYAV 157

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP+ ++ + L K++SLA+ +G  DL      I N T Q  +I +I   IYL +    AL 
Sbjct: 158 PPIINRSIILFKDTSLAMVIGVTDLTYQTKRIENATFQTFQIFMISTLIYLCM----ALL 213

Query: 385 MNRLNAKIALK 395
           ++ L A +A K
Sbjct: 214 ISALGAHLARK 224


>gi|91788588|ref|YP_549540.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91697813|gb|ABE44642.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 255

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 79/133 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +AL+    A+I+EI R+G+ ++ +GQ+EA+ +LG++  +    V+LPQA R ++P
Sbjct: 123 FLSGIVALTLNAGAYISEIFRAGIQSIDKGQVEASRSLGMSFPRTMYHVVLPQAFRRMLP 182

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  ++LLK+SSL  A+G A+L     T+     +  E  L    +Y  L++ +A  +
Sbjct: 183 PLGNNAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYVV 242

Query: 386 NRLNAKIALKEKK 398
            +L A+    + +
Sbjct: 243 KKLEARYGRGDSR 255


>gi|49484100|ref|YP_041324.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257425970|ref|ZP_05602394.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|282904433|ref|ZP_06312321.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906256|ref|ZP_06314111.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909175|ref|ZP_06316993.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282911481|ref|ZP_06319283.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282919619|ref|ZP_06327354.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C427]
 gi|283958611|ref|ZP_06376062.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295428436|ref|ZP_06821065.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|49242229|emb|CAG40936.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|257271664|gb|EEV03810.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|282317429|gb|EFB47803.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C427]
 gi|282325176|gb|EFB55486.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282327439|gb|EFB57734.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282331548|gb|EFB61062.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282596051|gb|EFC01015.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|283790760|gb|EFC29577.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295127836|gb|EFG57473.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|312437677|gb|ADQ76748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315195770|gb|EFU26157.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus CGS00]
          Length = 485

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|314934479|ref|ZP_07841838.1| amino acid ABC transporter, permease protein [Staphylococcus caprae
           C87]
 gi|313652409|gb|EFS16172.1| amino acid ABC transporter, permease protein [Staphylococcus caprae
           C87]
          Length = 239

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 94/155 (60%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG+ ++LF T L R    K  + +  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITIVTFILGLAIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLITNDADNQWTLAPVVAAI-IGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +R+  + ++LPQA+R  IP L + +L L+K++SL
Sbjct: 147 NYRQTVQRIILPQAIRVSIPALGNTFLGLIKDTSL 181


>gi|118476113|ref|YP_893264.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|118415338|gb|ABK83757.1| amino acid ABC transporter membrane protein, PAAT family [Bacillus
           thuringiensis str. Al Hakam]
          Length = 233

 Score = 79.7 bits (195), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 75/126 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + ++ RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 92  IALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++   F+N L  
Sbjct: 152 FIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLETYMIVGLYYLVLVLLFTYFVNLLEK 211

Query: 391 KIALKE 396
           ++  KE
Sbjct: 212 RLQRKE 217


>gi|325978020|ref|YP_004287736.1| inner membrane amino-acid ABC transporter permease yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325177948|emb|CBZ47992.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 517

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 14/171 (8%)

Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V S +L +VL   + A R+S +        L  LYI   ++ GLP LV+++L     +  
Sbjct: 25  VVSMILALVLGGVVTAARMSDNL---LISGLTKLYIE--VVRGLPMLVILSL---FFYGL 76

Query: 249 PVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG FN   GS    +    +S  I L+   + F+AEI RSG+ AV  GQ E A ++G 
Sbjct: 77  PELG-FNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGARSIGF 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
              +  R V++PQA ++I+P L +++ N +K+SS A  +G ADL+    TI
Sbjct: 136 NKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTI 186



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y + IL G + T +L+   MI A ++G +V A R+S N L++ + ++Y+EV R +P LV
Sbjct: 8   NYGSFILDGALMTVFLSVVSMILALVLGGVVTAARMSDNLLISGLTKLYIEVVRGLPMLV 67

Query: 144 VI-FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++  F Y        +PD S+   FG+ L+
Sbjct: 68  ILSLFFYGLPELGFNVPDGSL---FGVDLD 94


>gi|76574839|gb|ABA47313.1| ABC-type amino acid transport system, permease component
           [Pseudomonas cichorii]
          Length = 246

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 69/111 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +  L+ Y++AFIAE  R+G+ +V   Q  A  ALGL   +  R V+LPQA+R+ +
Sbjct: 112 EFIAGFWGLTLYSSAFIAEEFRAGVASVRPQQRTAGQALGLRPAQVWRYVVLPQAVRTAL 171

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PL  QY+N+LKNSSL +A+G A+L      +  +T +A +   I   +Y+
Sbjct: 172 GPLLGQYMNVLKNSSLTMAIGLAELSYASRQVETETFKAFQAFGIATLLYI 222



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L+    + AT +G LV   R+S+++L +W  R Y+ +FRN P LV +FF Y  
Sbjct: 21  GFLLTLRLSILVCLIATALGFLVCLARISSSRLWSWPARGYLSLFRNTPLLVQLFFWYFG 80

Query: 152 VLSVLP 157
           V ++LP
Sbjct: 81  VSALLP 86


>gi|86360226|ref|YP_472115.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284328|gb|ABC93388.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 251

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 90/157 (57%), Gaps = 11/157 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P+L       G+ V P F+++   L  Y +AF++E+VR+G++
Sbjct: 74  GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+A+ ALG ++  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL 
Sbjct: 124 ALGPGQMDASRALGHSYVGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMN 386
                + NQ   Q  ++ LI   +Y ++   +  F N
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220


>gi|299822330|ref|ZP_07054216.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299815859|gb|EFI83097.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 496

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 97/176 (55%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL  + F+ FG+P     AL +++                   P F++  +ALS  
Sbjct: 341 RGTPLLVQAFFIYFGIPQ----ALDFRM-------------------PAFLAALLALSLN 377

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ +V  GQMEAA +LGL +RK+   ++LPQA+R++IP   +Q++  LK
Sbjct: 378 AGAYMVEIVRGGIQSVDSGQMEAARSLGLPYRKSMIKIVLPQAIRTMIPSFINQFVITLK 437

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G  +L   G  II +T Q+ +I LI   +YL +  ++    +R+  ++
Sbjct: 438 DTSIMSVIGLVELTQSGKIIIARTFQSFDIWLIVALMYLIVITILTKVSDRVERRL 493



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           G  S+++GF        + S      A+L G   T  L    ++ A IIG + G  ++S 
Sbjct: 274 GEASQKSGF--------FASLGESWPALLAGLWYTIRLTVLSLLIALIIGVVFGFMKVSQ 325

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           N++V  I  VYV++FR  P LV  FF+Y
Sbjct: 326 NRIVRGIATVYVDIFRGTPLLVQAFFIY 353


>gi|54025809|ref|YP_120051.1| putative glutamate transporter permease [Nocardia farcinica IFM
           10152]
 gi|54017317|dbj|BAD58687.1| putative glutamate transporter permease protein [Nocardia farcinica
           IFM 10152]
          Length = 299

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 105/202 (51%), Gaps = 15/202 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF+ V+G+V  +   RLS H   +      + +        +P L+L+   + L+ +  +
Sbjct: 82  VFAMVIGMVFGIL--RLSDHRWVRIVAGAIVEFARA-----IPVLILMIFLFALYSEYDL 134

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               +    + V+        AL+ Y  + IAEIVR+G+ ++PRGQ EAA+ALGL   + 
Sbjct: 135 FKSDDLALAAVVT--------ALTVYNGSVIAEIVRAGIRSLPRGQTEAAMALGLRKNQL 186

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+LLPQA+ +++P L SQ +  LK+++L   + + ++V  G  +       I  +++ 
Sbjct: 187 MRLILLPQAITAMLPALISQMVVALKDTALGYQITYVEIVRSGQQLGASESNTIPALIVV 246

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             + ++L+  + +   RL  ++
Sbjct: 247 AVVMIALNSTLTVVATRLERRL 268



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 1/85 (1%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            E+  FE D+   P+     + T +L G   T   A   ++ A +IG + G  RLS ++ 
Sbjct: 43  EEKGQFEADK-WKPFLEGEVWETYLLPGLRGTIVAALLSIVFAMVIGMVFGILRLSDHRW 101

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           V  +    VE  R IP L+++ FL+
Sbjct: 102 VRIVAGAIVEFARAIPVLILMIFLF 126


>gi|311280312|ref|YP_003942543.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749507|gb|ADO49259.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 219

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++P
Sbjct: 90  FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLLITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRMKI 218



 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W++  G++   IIG + G  R     +   I  V++EV R  P +V + F+
Sbjct: 15  LLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIANHIALVFIEVIRGTPIVVQVMFI 74

Query: 149 YKSVLSVLP 157
           Y ++   LP
Sbjct: 75  YFALPMALP 83


>gi|225386718|ref|ZP_03756482.1| hypothetical protein CLOSTASPAR_00466 [Clostridium asparagiforme
           DSM 15981]
 gi|225047196|gb|EEG57442.1| hypothetical protein CLOSTASPAR_00466 [Clostridium asparagiforme
           DSM 15981]
          Length = 235

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 2/135 (1%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           IGG    P+FM   + +  Y  A+I+E++R+G+ AVP+GQ EAA + G T+ +  R ++L
Sbjct: 89  IGGRV--PKFMLGVLGVGIYHGAYISEVIRTGIEAVPKGQFEAAYSQGFTYLQTMRYIIL 146

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ ++ I+P L +Q LNL+KN+S+   V   DL+    +  +  G   +       +Y  
Sbjct: 147 PQTIKLIMPSLANQALNLVKNTSVLAMVAGLDLMYFADSWGSDRGYFAQAYFSCALLYFV 206

Query: 377 LSIMIALFMNRLNAK 391
           +   +A     L A+
Sbjct: 207 ICFPLARLARYLEAR 221


>gi|209885183|ref|YP_002289040.1| general L-amino acid transport system permease protein AapM
           [Oligotropha carboxidovorans OM5]
 gi|209873379|gb|ACI93175.1| general L-amino acid transport system permease protein AapM
           [Oligotropha carboxidovorans OM5]
          Length = 454

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 63/96 (65%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G       + + + ++ +  A+ AE++R GL+A+PRGQ EAA ALGL++ K T L++
Sbjct: 308 FLPGDFTIDALVRVLVGIALFAGAYNAEVIRGGLLAIPRGQREAANALGLSYWKTTGLIV 367

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA+R +IP L + ++ L K+++L + V   DL+ 
Sbjct: 368 LPQALRHVIPSLVNSFIALFKDTTLVLIVALFDLLG 403


>gi|257869445|ref|ZP_05649098.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257803609|gb|EEV32431.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 218

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 91/162 (56%), Gaps = 14/162 (8%)

Query: 232 LPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           LP L++I   Y   F  P +G +FN          F S  +AL+ + +A ++EI R+GL 
Sbjct: 65  LPLLLIIFFTY---FALPQIGIRFNI---------FWSAVVALTIFESAMLSEIFRAGLN 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQMEA ++ GL++ +  R +++PQA ++++P + SQ ++L+K++SLAV +   +L 
Sbjct: 113 AVPKGQMEAGLSTGLSYVQVLRSIVMPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELT 172

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  Q T   + + L    +Y  +   ++L    L A+
Sbjct: 173 HHARIIYGQNTNYVLPMFLAMTVLYFIVCYALSLLSRFLEAR 214


>gi|167771386|ref|ZP_02443439.1| hypothetical protein ANACOL_02752 [Anaerotruncus colihominis DSM
           17241]
 gi|167666026|gb|EDS10156.1| hypothetical protein ANACOL_02752 [Anaerotruncus colihominis DSM
           17241]
          Length = 221

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 19/207 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   ++G VL+L   R+SR    +  + +  LYI+  +I G+P +  + + Y + F    
Sbjct: 33  VIGTLIGAVLALM--RISRS---RLLRGISTLYIT--VIRGIPMVTQLMIFYFIFF---- 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                     T  P+ +   I+    + A+ AEI RSG+  VP GQ+EA  +LGL+  + 
Sbjct: 82  --------APTNVPKLVVAIISFGVNSGAYCAEIFRSGIQGVPVGQVEAGRSLGLSGAQT 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            +L++LPQA ++++P  T++++ L+K +++A  +   DL      I N T  A   +L  
Sbjct: 134 MKLIILPQAFKAVLPTYTNEFVVLIKETAVASYIALVDLTKATDQIRNATFNAWVPLLTA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             IYL +++ ++    RL  ++A  ++
Sbjct: 194 AVIYLCMTLGLSALFARLERRMARSDR 220


>gi|254439200|ref|ZP_05052694.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198254646|gb|EDY78960.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 247

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 33/209 (15%)

Query: 193 SFVLGIVLSL---FATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           S VLG++++L      R  R F+    +  +++P+L +  ++ +GLPT            
Sbjct: 60  SVVLGLLIALPGLSEKRGWRMFNRTYVEIVRSVPILVLILWVYYGLPT------------ 107

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                     + G T+S  F S  +AL+   +AF AEI R+G+ ++ RGQ EAA ++ L 
Sbjct: 108 ----------VSGITLSV-FWSGVLALALSDSAFQAEIFRAGIQSIGRGQYEAAQSVSLN 156

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R   R ++LPQA+R I+P L +Q + +LK SSL   +G  +L      ++    + +EI
Sbjct: 157 YRDTMRYIILPQAIRRILPALGNQLVYMLKMSSLVSVIGLQELTRRANELVVSEYRPLEI 216

Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAK 391
               +L ++F+ L +S  +  F  RL A 
Sbjct: 217 YSVLVLQYLFLILIVSAGVRWFERRLKAS 245


>gi|90413735|ref|ZP_01221723.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90325204|gb|EAS41701.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 223

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 17/202 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250
           F+ ++ I L+L      R +       L  LYIS F   G P LV L  L Y L    P+
Sbjct: 32  FALIIAITLALV-----RVYKLPVLNQLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPI 84

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                FIG    S       I LS + AA++AE +R+ +I V R Q EA++A+G+T  +A
Sbjct: 85  -----FIGLDAFSASV----IGLSLHFAAYMAESIRAAIIGVDRSQREASLAIGMTEMQA 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA R  +P L + +++++K++SLA  +G A++++      + + +  E  L  
Sbjct: 136 MRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAV 195

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
            FIY  L +++    N   AK+
Sbjct: 196 AFIYWGLVLVLTQVQNWAEAKL 217


>gi|152964896|ref|YP_001360680.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
 gi|151359413|gb|ABS02416.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
          Length = 329

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 13/189 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLVLIALKY-QLHFD 247
             VLG VL+L      R       KA+   Y+S F    LI  L     +A+ Y ++ F 
Sbjct: 98  GLVLGTVLALM-----RMSGNPLLKAVSFTYVSVFRSVPLILQLLFWYNMAILYDRIGFG 152

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P   QF  I    +     + ++ L  + AA+ AEIVRSG +AV  GQ EAA ALG+  
Sbjct: 153 VPFGPQFWTISTQDLIGPVTAAFLGLGLHQAAYFAEIVRSGFLAVDPGQREAAAALGIPR 212

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R + LPQA+R I+P   ++ + LLK +S+   +   +L      + N+TGQ I ++
Sbjct: 213 LRQFRRIQLPQALRVIVPTTGNEVIGLLKGTSVVYVMALPELFYQVQVVYNRTGQVIPLL 272

Query: 368 L---IWMFI 373
           L   +W F+
Sbjct: 273 LVAAVWYFV 281


>gi|317401660|gb|EFV82285.1| glutamate/aspartate transport system permease 2 [Achromobacter
           xylosoxidans C54]
          Length = 250

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 18/211 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +VFS +LG  L +  T  SR        + +  + +PLL       F LP L+  A    
Sbjct: 40  WVFSLLLGSCLGVMRTASSRLANAIGATYVEIFRNVPLLVQMFLWYFVLPELLPHAWGLA 99

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +       GQF            +   + L  Y +A +AE +R+G+ ++PRGQ +A  AL
Sbjct: 100 MKQMPQPWGQF------------LPAVLCLGFYGSARVAEQLRAGIQSLPRGQFQAGTAL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R ++LP+A R ++PPLTS+++  +K SS+A+ +G  +L     ++   +   
Sbjct: 148 GLTETQVYRHIILPEAYRIVLPPLTSEFMGTIKYSSVALTIGLLELTGQTRSMAEFSFHI 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E       IYL L+ ++ L M  L   +A+
Sbjct: 208 FEAFTAATVIYLILNGIVVLGMRLLERHVAV 238



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 4/92 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   IL+G   T  LA +  + + ++G+ +G  R ++++L   I   YVE+FRN+P LV
Sbjct: 20  TFLETILIGVGWTLALALTAWVFSLLLGSCLGVMRTASSRLANAIGATYVEIFRNVPLLV 79

Query: 144 VIFFLYKSVLSVLP----IPDHSIVLPFGMFL 171
            +F  Y  +  +LP    +    +  P+G FL
Sbjct: 80  QMFLWYFVLPELLPHAWGLAMKQMPQPWGQFL 111


>gi|242240516|ref|YP_002988697.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132573|gb|ACS86875.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 214

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 15/148 (10%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALS 274
           G+ L LLY  T L  G P  VLI L + ++F     G + N          F +  + LS
Sbjct: 48  GRQLALLY--TELFRGTP--VLITLMF-IYFGVAYFGYEINL---------FAAGILGLS 93

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            Y  A+I+E+ R+G+ AVP+GQ E +  LGL+  +    V+LPQ    ++PPL  QYL+L
Sbjct: 94  IYQGAYISEVFRAGIDAVPKGQWEVSWILGLSKWQTFMHVVLPQTRGIVLPPLVGQYLSL 153

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +K++S+   +G ++L+  G  I+++ GQ
Sbjct: 154 IKDTSIVSMIGMSELMHQGQAIVDRIGQ 181


>gi|227328458|ref|ZP_03832482.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 314

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 10/183 (5%)

Query: 226 TFLIFGLPTLVLIALKYQL-------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T+   G+PTLV + L Y +           P +G+   + G+T+   F +  +AL  + +
Sbjct: 102 TWFFRGVPTLVQLFLWYNIAALYPTISLSLPFVGELFSVPGNTLISPFNAAVLALVMHQS 161

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEIVR+G+ +V  GQ+EAA ALG    +     +LPQAMR+I+PP  ++ +  LK +
Sbjct: 162 AYAAEIVRAGIQSVNPGQLEAARALGYRKPQIFFYTVLPQAMRAILPPAGNEVIGQLKTT 221

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKIALK 395
           ++   +   D++     I  +T + I ++L+    YL L+ ++++   ++ R   +  LK
Sbjct: 222 AVVSVISLQDVLYSAQIIYQRTYEVIPLLLVATIWYLLLTSVLSVGQYYVERYFGRSTLK 281

Query: 396 EKK 398
             K
Sbjct: 282 RNK 284


>gi|297590597|ref|ZP_06949235.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|297575483|gb|EFH94199.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|205375469|ref|ZP_03228257.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coahuilensis m4-4]
          Length = 219

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 95/169 (56%), Gaps = 17/169 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F F+LGI+L+ F     +       K   + Y S F   G P ++ IAL Y   F  P L
Sbjct: 32  FGFLLGIILAFFKISTIKPL-----KWFGIAYTSIFR--GTPLILQIALIY---FATPQL 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +++      + P  ++  IA +  +AA+I+E +R G++AV +GQ EAA++LG+ +RK  
Sbjct: 82  LRYD------IDP-LLAGVIAFALNSAAYISETIRGGILAVDKGQREAAMSLGVPYRKMM 134

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             +++PQA++ I+P L ++ + LLK S+L   +G  DL+     + ++T
Sbjct: 135 WHIVMPQAVKKILPALANESIALLKESALVSTIGAMDLLRRATIVSSKT 183


>gi|196040103|ref|ZP_03107405.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus NVH0597-99]
 gi|300118987|ref|ZP_07056698.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus SJ1]
 gi|196028958|gb|EDX67563.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus NVH0597-99]
 gi|298723603|gb|EFI64334.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus SJ1]
          Length = 230

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAYVGLSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++    +N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 214


>gi|312830230|emb|CBX35072.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Staphylococcus aureus subsp. aureus ECT-R 2]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGVFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|261210915|ref|ZP_05925205.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260839890|gb|EEX66490.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 365

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWVFCF 346


>gi|323339490|ref|ZP_08079769.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
 gi|323093104|gb|EFZ35697.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
          Length = 215

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 33/208 (15%)

Query: 191 VFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           VFS  LG++ +L   R S+         F+    +  PLL    F+ +GLP L       
Sbjct: 27  VFSLPLGLICAL--GRCSKFKILNAVLRFYIWLMRGTPLLLQLIFVFYGLPLL------- 77

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                          G   V P + +  +A      A+ AEI R GL ++ RGQ E+A  
Sbjct: 78  ---------------GTGIVLPRYAAALVAFVLNYTAYFAEIFRGGLQSIDRGQYESARV 122

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L LT+ +  R ++ PQ M+ ++P + ++ +NL+K+SSL   +G  DL+  G    ++   
Sbjct: 123 LRLTYWQTIRKIIAPQVMKIVVPSIGNEVINLIKDSSLVYVIGLGDLLRAGNVASSRDVS 182

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNA 390
            I ++L+ + IYL+L+ +    + ++ A
Sbjct: 183 LIPLVLVGI-IYLALTAVFTWMLQKVEA 209


>gi|15641372|ref|NP_231004.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121587995|ref|ZP_01677747.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121728528|ref|ZP_01681551.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147674160|ref|YP_001216919.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153212686|ref|ZP_01948343.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|153819357|ref|ZP_01972024.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153825276|ref|ZP_01977943.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|153828797|ref|ZP_01981464.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|183179358|ref|ZP_02957569.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227081531|ref|YP_002810082.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505059|ref|ZP_04394569.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229511271|ref|ZP_04400750.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229515732|ref|ZP_04405191.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229518389|ref|ZP_04407833.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229523538|ref|ZP_04412943.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229529564|ref|ZP_04418954.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229608063|ref|YP_002878711.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254848482|ref|ZP_05237832.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255745747|ref|ZP_05419695.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262158975|ref|ZP_06030087.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262169334|ref|ZP_06037026.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|298498556|ref|ZP_07008363.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9655853|gb|AAF94518.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121547736|gb|EAX57827.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121629192|gb|EAX61632.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|124116336|gb|EAY35156.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|126510102|gb|EAZ72696.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|146316043|gb|ABQ20582.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|148875750|gb|EDL73885.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|149741104|gb|EDM55163.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|183012769|gb|EDT88069.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227009419|gb|ACP05631.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227013277|gb|ACP09487.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229333338|gb|EEN98824.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229337119|gb|EEO02136.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229345104|gb|EEO10078.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229347501|gb|EEO12461.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229351236|gb|EEO16177.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229357282|gb|EEO22199.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229370718|gb|ACQ61141.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254844187|gb|EET22601.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255736822|gb|EET92219.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262022147|gb|EEY40856.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|262029160|gb|EEY47812.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|297542889|gb|EFH78939.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|327484030|gb|AEA78437.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 365

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346


>gi|328950980|ref|YP_004368315.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
 gi|328451304|gb|AEB12205.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
          Length = 376

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 18/185 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG++L+L      R       + L  LYI T  + G+P + ++ L + +    P+  
Sbjct: 184 SFPLGLLLAL-----GRTSRLPAIRILATLYIET--VRGVPLVSVLFLAWIM---VPL-- 231

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F+  +   P+ + +    + + AA++AE +R GL  VP+GQ EAA ALGL   +   
Sbjct: 232 ---FVPEAWRPPQLVRVIAGFTLFAAAYLAEYIRGGLQGVPKGQYEAAWALGLNGFQTAY 288

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILI 369
            ++LPQA+RS+IP L  Q + + K++SL   VG  DL+ +  +++   N  G   E+ L 
Sbjct: 289 YIILPQAIRSVIPALIGQVIAIFKDTSLVAIVGLLDLLGIAQSVLANPNYLGLEREVYLF 348

Query: 370 WMFIY 374
            + +Y
Sbjct: 349 LLVVY 353


>gi|312139385|ref|YP_004006721.1| glutamate abc transporter integral membrane subunit gluc
           [Rhodococcus equi 103S]
 gi|325672734|ref|ZP_08152430.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
 gi|311888724|emb|CBH48036.1| putative glutamate ABC transporter integral membrane subunit GluC
           [Rhodococcus equi 103S]
 gi|325556611|gb|EGD26277.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
          Length = 227

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 1/122 (0%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YTAAF+ E +RSG+  VP GQ EAA +LGLT  +  R+++LPQA R++I PL S  + L 
Sbjct: 106 YTAAFVCESLRSGINTVPIGQAEAARSLGLTFTQGIRMIVLPQAFRAVIAPLGSVLIALT 165

Query: 336 KNSSLAVAVGFADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           KN+++A A+G A+   +  T+I N+  +   +  I+   ++ L++ +      L  ++A+
Sbjct: 166 KNTTIASAIGVAEASLLMKTMIENEADKLFLVFGIFAIGFMILTLPVGFLFGYLGKRLAV 225

Query: 395 KE 396
           K 
Sbjct: 226 KR 227


>gi|260550664|ref|ZP_05824873.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
 gi|260406375|gb|EEW99858.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
          Length = 225

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 8/166 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P   LI + +  +F  P +  F F   +   P F S+ +  + + AAF +EIVRSG+ 
Sbjct: 64  GIP---LIQVIFIFYFLLPKI--FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQ 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +   D +
Sbjct: 118 SISKGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFL 177

Query: 351 SVGGTIINQTGQAIE--IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               T+ N  G   +    LI   +Y   S +++  + RL  KIA+
Sbjct: 178 GRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQKKIAI 223



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS + + +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNSTIASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LY 149
            Y
Sbjct: 74  FY 75


>gi|126641538|ref|YP_001084522.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
          Length = 196

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 8/166 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P   LI + +  +F  P +  F F   +   P F S+ +  + + AAF +EIVRSG+ 
Sbjct: 35  GIP---LIQVIFIFYFLLPKI--FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQ 88

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +   D +
Sbjct: 89  SISKGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFL 148

Query: 351 SVGGTIINQTGQAIE--IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               T+ N  G   +    LI   +Y   S +++  + RL  KIA+
Sbjct: 149 GRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQKKIAI 194



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 27/46 (58%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           M+   +IGT +   RLS N L +   + YV++FR IP + VIF  Y
Sbjct: 1   MMGGILIGTPLAMMRLSNNALASNFAKFYVDLFRGIPLIQVIFIFY 46


>gi|257428635|ref|ZP_05605033.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431272|ref|ZP_05607649.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433952|ref|ZP_05610310.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257436868|ref|ZP_05612912.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus M876]
 gi|282914654|ref|ZP_06322440.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282924999|ref|ZP_06332665.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C101]
 gi|293503725|ref|ZP_06667572.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293510746|ref|ZP_06669451.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus M809]
 gi|293537288|ref|ZP_06671968.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|257275476|gb|EEV06963.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278220|gb|EEV08868.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257282045|gb|EEV12182.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284219|gb|EEV14342.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus M876]
 gi|282313365|gb|EFB43761.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C101]
 gi|282321835|gb|EFB52160.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|290920133|gb|EFD97201.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291095391|gb|EFE25656.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291466637|gb|EFF09158.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus M809]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|269127495|ref|YP_003300865.1| polar amino acid ABC transporter inner membrane subunit
           [Thermomonospora curvata DSM 43183]
 gi|268312453|gb|ACY98827.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermomonospora curvata DSM 43183]
          Length = 228

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 1/127 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS YT+AF+ E +RSG+  VP GQ EAA ++GLT  ++ RLV+LPQA R++I PL S 
Sbjct: 102 LGLSIYTSAFVCEALRSGINTVPIGQAEAARSIGLTFTQSLRLVILPQAFRAVIAPLGSV 161

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + ++KN+++  AV +  D  +V   + +  G +I I +     Y+ L++    F   L 
Sbjct: 162 MIAMIKNTTVVGAVAYGRDAAAVMKDMFDDLGASIPIFVGIAIGYMILTLPTGFFFGWLA 221

Query: 390 AKIALKE 396
            ++A+  
Sbjct: 222 KRMAVAR 228


>gi|16804386|ref|NP_465871.1| hypothetical protein lmo2348 [Listeria monocytogenes EGD-e]
 gi|47096046|ref|ZP_00233648.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224499027|ref|ZP_03667376.1| hypothetical protein LmonF1_04718 [Listeria monocytogenes Finland
           1988]
 gi|224503522|ref|ZP_03671829.1| hypothetical protein LmonFR_13617 [Listeria monocytogenes FSL
           R2-561]
 gi|254826827|ref|ZP_05231514.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|254831227|ref|ZP_05235882.1| hypothetical protein Lmon1_07712 [Listeria monocytogenes 10403S]
 gi|254901126|ref|ZP_05261050.1| hypothetical protein LmonJ_14968 [Listeria monocytogenes J0161]
 gi|254914024|ref|ZP_05264036.1| amino acid ABC transporter [Listeria monocytogenes J2818]
 gi|254938339|ref|ZP_05270036.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|255028990|ref|ZP_05300941.1| hypothetical protein LmonL_07146 [Listeria monocytogenes LO28]
 gi|284802789|ref|YP_003414654.1| hypothetical protein LM5578_2546 [Listeria monocytogenes 08-5578]
 gi|284995931|ref|YP_003417699.1| hypothetical protein LM5923_2496 [Listeria monocytogenes 08-5923]
 gi|16411836|emb|CAD00426.1| lmo2348 [Listeria monocytogenes EGD-e]
 gi|47015643|gb|EAL06574.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258599205|gb|EEW12530.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258610951|gb|EEW23559.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|284058351|gb|ADB69292.1| hypothetical protein LM5578_2546 [Listeria monocytogenes 08-5578]
 gi|284061398|gb|ADB72337.1| hypothetical protein LM5923_2496 [Listeria monocytogenes 08-5923]
 gi|293592042|gb|EFG00377.1| amino acid ABC transporter [Listeria monocytogenes J2818]
          Length = 238

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 24/211 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +          +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVLLSL-----PRIYKVPILDQFARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL+ 
Sbjct: 83  LSSVFGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y+SLSI+  L    L       EK+
Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222


>gi|126665865|ref|ZP_01736846.1| glutamine ABC transporter permease [Marinobacter sp. ELB17]
 gi|126629799|gb|EBA00416.1| glutamine ABC transporter permease [Marinobacter sp. ELB17]
          Length = 223

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 23/175 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L    F+ +GLP LV                      G  + P  ++   A++  
Sbjct: 67  RGTPILVQVLFIFYGLPDLV----------------------GGPIDP-LVAGIAAIALN 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+E+VR G+ ++ RGQ EA ++LGL+  ++   ++ PQA R +IPPL +Q +  +K
Sbjct: 104 SGAYISEVVRGGVQSIDRGQTEAGLSLGLSRTQSFWSIVWPQAFRRMIPPLGNQAIVSIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  +LV  G   I  T  A E+  +   +YL++++ +++ +  +  +
Sbjct: 164 DTSLFSVIGVGELVRQGQVYIANTFTAFEVYFVVALMYLAITLSLSMVLRYMEKR 218


>gi|148268330|ref|YP_001247273.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150394392|ref|YP_001317067.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|253315189|ref|ZP_04838402.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|255006646|ref|ZP_05145247.2| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257793783|ref|ZP_05642762.1| polar amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|258413720|ref|ZP_05681993.1| polar amino acid ABC transporter [Staphylococcus aureus A9763]
 gi|258420773|ref|ZP_05683712.1| polar amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|258438434|ref|ZP_05689718.1| polar amino acid ABC transporter [Staphylococcus aureus A9299]
 gi|258443879|ref|ZP_05692218.1| polar amino acid ABC transporter [Staphylococcus aureus A8115]
 gi|258447334|ref|ZP_05695481.1| polar amino acid ABC transporter [Staphylococcus aureus A6300]
 gi|258448183|ref|ZP_05696310.1| polar amino acid ABC transporter [Staphylococcus aureus A6224]
 gi|258453384|ref|ZP_05701367.1| polar amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|269203495|ref|YP_003282764.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282895157|ref|ZP_06303376.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A8117]
 gi|282928597|ref|ZP_06336196.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A10102]
 gi|295406165|ref|ZP_06815973.1| polar amino acid ABC transporter [Staphylococcus aureus A8819]
 gi|297244912|ref|ZP_06928789.1| polar amino acid ABC transporter [Staphylococcus aureus A8796]
 gi|147741399|gb|ABQ49697.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946844|gb|ABR52780.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|257787755|gb|EEV26095.1| polar amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|257839507|gb|EEV63978.1| polar amino acid ABC transporter [Staphylococcus aureus A9763]
 gi|257843377|gb|EEV67787.1| polar amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|257848478|gb|EEV72469.1| polar amino acid ABC transporter [Staphylococcus aureus A9299]
 gi|257851285|gb|EEV75228.1| polar amino acid ABC transporter [Staphylococcus aureus A8115]
 gi|257853921|gb|EEV76877.1| polar amino acid ABC transporter [Staphylococcus aureus A6300]
 gi|257858422|gb|EEV81298.1| polar amino acid ABC transporter [Staphylococcus aureus A6224]
 gi|257864476|gb|EEV87221.1| polar amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|262075785|gb|ACY11758.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282589806|gb|EFB94891.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A10102]
 gi|282762501|gb|EFC02642.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A8117]
 gi|283471129|emb|CAQ50340.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus ST398]
 gi|294969162|gb|EFG45183.1| polar amino acid ABC transporter [Staphylococcus aureus A8819]
 gi|297177992|gb|EFH37240.1| polar amino acid ABC transporter [Staphylococcus aureus A8796]
 gi|315130497|gb|EFT86483.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|329732960|gb|EGG69304.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|329727185|gb|EGG63641.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|328956550|ref|YP_004373936.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp.
           17-4]
 gi|328672874|gb|AEB28920.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp.
           17-4]
          Length = 236

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 59/86 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF    + +  Y  A+I E+VR+G+++V +GQ EAA A G ++ +  R ++LPQ ++ I+
Sbjct: 94  EFTIGVVGVGLYHGAYIGEVVRAGILSVTKGQQEAAYAQGFSYTQTMRYIILPQMVKGIL 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350
           PPLT+Q +NL+KN+S+   +  ADL+
Sbjct: 154 PPLTNQAVNLIKNTSVLAIIAGADLM 179



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 39/61 (63%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  +A   ++ + +IG ++G    + N ++  I RVYVE+F+NIP ++ IFF+Y  
Sbjct: 25  GFLRTLQVAILALVLSLVIGIIIGILSTAHNLILRSIARVYVEIFQNIPLVIQIFFMYNG 84

Query: 152 V 152
           +
Sbjct: 85  L 85


>gi|296276990|ref|ZP_06859497.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus MR1]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|288905048|ref|YP_003430270.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus UCN34]
 gi|288731774|emb|CBI13337.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Streptococcus gallolyticus UCN34]
          Length = 517

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 93/171 (54%), Gaps = 14/171 (8%)

Query: 191 VFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V S +L +VL   + A R+S +        L  LYI   ++ GLP LV+++L     +  
Sbjct: 25  VVSMILALVLGGVVTAARMSDNL---LISGLTKLYIE--VVRGLPMLVILSL---FFYGL 76

Query: 249 PVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG FN   GS    +    +S  I L+   + F+AEI RSG+ AV  GQ E A ++G 
Sbjct: 77  PELG-FNVPDGSLFGVDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGARSIGF 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
              +  R V++PQA ++I+P L +++ N +K+SS A  +G ADL+    TI
Sbjct: 136 NKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTI 186



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 4/90 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y + IL G + T +L+   MI A ++G +V A R+S N L++ + ++Y+EV R +P LV
Sbjct: 8   NYGSFILDGALMTVFLSVVSMILALVLGGVVTAARMSDNLLISGLTKLYIEVVRGLPMLV 67

Query: 144 VI-FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++  F Y        +PD S+   FG+ L+
Sbjct: 68  ILSLFFYGLPELGFNVPDGSL---FGVDLD 94


>gi|258423136|ref|ZP_05686030.1| polar amino acid ABC transporter [Staphylococcus aureus A9635]
 gi|257846700|gb|EEV70720.1| polar amino acid ABC transporter [Staphylococcus aureus A9635]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPSLGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|167756843|ref|ZP_02428970.1| hypothetical protein CLORAM_02392 [Clostridium ramosum DSM 1402]
 gi|167703018|gb|EDS17597.1| hypothetical protein CLORAM_02392 [Clostridium ramosum DSM 1402]
          Length = 226

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 113/206 (54%), Gaps = 13/206 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG++ +  A ++S+H   K  + +  +Y+   LI G P L+ I     L+   P+L
Sbjct: 33  FGLILGVLGA--AAKISKH---KILRLIGNVYVE--LIRGTPMLLQILF---LYIAFPLL 82

Query: 252 GQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                I G    P+ ++   IA+S  + A+  E++RSG++ V +GQ EA   LGL + + 
Sbjct: 83  --MRSITGERFIPDPYVCGAIAMSINSGAYSTELIRSGIMGVDKGQWEACEVLGLNYTQT 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            +L++LPQA + IIPP+ S+++ L+K+SSL   +G  +L+     +   T   I  +L  
Sbjct: 141 MKLIILPQAFKRIIPPIVSEFITLIKDSSLISVLGATELLYSAQILGANTFNLIPPLLAS 200

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +YL +++  + F  ++  ++++ +
Sbjct: 201 AVLYLIMTLTTSYFARKIERRLSVSD 226



 Score = 39.7 bits (91), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  LA   +    I+G L  A ++S +K++  I  VYVE+ R  P L+ I FL
Sbjct: 16  LLQGAGKSLLLAACALFFGLILGVLGAAAKISKHKILRLIGNVYVELIRGTPMLLQILFL 75

Query: 149 Y-------KSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           Y       +S+     IPD  +     M +N+   S
Sbjct: 76  YIAFPLLMRSITGERFIPDPYVCGAIAMSINSGAYS 111


>gi|229521466|ref|ZP_04410885.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|297578945|ref|ZP_06940873.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|229341564|gb|EEO06567.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|297536539|gb|EFH75372.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 365

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346


>gi|283770942|ref|ZP_06343834.1| polar amino acid ABC transporter inner membrane subunit
           [Staphylococcus aureus subsp. aureus H19]
 gi|283461089|gb|EFC08179.1| polar amino acid ABC transporter inner membrane subunit
           [Staphylococcus aureus subsp. aureus H19]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 43.1 bits (100), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIPSIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|290956974|ref|YP_003488156.1| glutamate uptake system protein [Streptomyces scabiei 87.22]
 gi|260646500|emb|CBG69597.1| glutamate uptake system [Streptomyces scabiei 87.22]
          Length = 225

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 74/122 (60%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            YTAAF+ E +RSG+  VP GQ EAA A+GL   +   L++LPQA R++I PL +  + L
Sbjct: 104 AYTAAFVCEALRSGINTVPVGQAEAARAIGLNFTQVLGLIVLPQAFRAVIGPLANVLIAL 163

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            KN+++A A+G  +   +   +I +  Q + I  I+ F ++ L++   L +  L+ ++A+
Sbjct: 164 TKNTTVAAAIGVWEAAYLMKGMIEKEAQTLLIGAIFAFGFVVLTLPTGLILGWLSKRLAV 223

Query: 395 KE 396
           K 
Sbjct: 224 KR 225


>gi|254225348|ref|ZP_04918960.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125622189|gb|EAZ50511.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
          Length = 365

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346


>gi|325570407|ref|ZP_08146184.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156617|gb|EGC68794.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 218

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 37/169 (21%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS VLG+V+ +              + LPLL I  F  F LP    I +++ +      
Sbjct: 50  VFSKVLGVVIDVI-------------RNLPLLLIIFFTYFALPQ---IGIRFNI------ 87

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                          F S  +AL+ + +A ++EI R+GL AVP+GQMEA ++ GL++ + 
Sbjct: 88  ---------------FWSAVVALTIFESAMLSEIFRAGLNAVPKGQMEAGLSTGLSYVEV 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            R +++PQA ++++P + SQ ++L+K++SLAV +   +L      I  Q
Sbjct: 133 LRSIVVPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELTHHARIIYGQ 181


>gi|254286188|ref|ZP_04961148.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|262192391|ref|ZP_06050544.1| ABC-type amino acid transport system permease component [Vibrio
           cholerae CT 5369-93]
 gi|150423857|gb|EDN15798.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|262031744|gb|EEY50329.1| ABC-type amino acid transport system permease component [Vibrio
           cholerae CT 5369-93]
          Length = 365

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346


>gi|57650956|ref|YP_187214.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|161510604|ref|YP_001576263.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|258407433|ref|ZP_05680576.1| ABC amino acid transporter [Staphylococcus aureus A9763]
 gi|258422239|ref|ZP_05685151.1| amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|294848955|ref|ZP_06789700.1| polar amino acid transport system permease [Staphylococcus aureus
           A9754]
 gi|295405100|ref|ZP_06814913.1| polar amino acid transport system permease [Staphylococcus aureus
           A8819]
 gi|297244157|ref|ZP_06928047.1| polar amino acid transport system permease [Staphylococcus aureus
           A8796]
 gi|57285142|gb|AAW37236.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|160369413|gb|ABX30384.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|257840945|gb|EEV65396.1| ABC amino acid transporter [Staphylococcus aureus A9763]
 gi|257841670|gb|EEV66107.1| amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|294824334|gb|EFG40758.1| polar amino acid transport system permease [Staphylococcus aureus
           A9754]
 gi|294970045|gb|EFG46063.1| polar amino acid transport system permease [Staphylococcus aureus
           A8819]
 gi|297178935|gb|EFH38180.1| polar amino acid transport system permease [Staphylococcus aureus
           A8796]
          Length = 242

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 97/155 (62%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V +   + + +  
Sbjct: 37  ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQL---FIIFYGI 90

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 91  PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 149

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           T+ +  + ++LPQA+R  IP L + +L+L+K++SL
Sbjct: 150 TYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 184


>gi|222823608|ref|YP_002575182.1| amino acid ABC transporter permease [Campylobacter lari RM2100]
 gi|222538830|gb|ACM63931.1| amino acid ABC transporter, permease protein [Campylobacter lari
           RM2100]
          Length = 250

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 80/119 (67%), Gaps = 8/119 (6%)

Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P+L Q   F+ +  +T S  F    IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL
Sbjct: 101 PILLQLLIFSVVIFATWSDNFYVAIIALGLNSSAYVAEIVRSGIQSVDKGQMEAARAMGL 160

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  + RL++ PQA+++I+P L +++++L K +S+   VG+  ++ +  T+ +++ QAI
Sbjct: 161 NYSASMRLIIFPQAIKNILPSLMNEFISLFKETSI---VGYISVMDI--TMQSKSLQAI 214


>gi|110798792|ref|YP_696773.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding
           protein/permease [Clostridium perfringens ATCC 13124]
 gi|168208796|ref|ZP_02634421.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens B str. ATCC 3626]
 gi|168212869|ref|ZP_02638494.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens CPE str. F4969]
 gi|168215721|ref|ZP_02641346.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens NCTC 8239]
 gi|110673439|gb|ABG82426.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens ATCC 13124]
 gi|170713169|gb|EDT25351.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715496|gb|EDT27678.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens CPE str. F4969]
 gi|182382310|gb|EDT79789.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens NCTC 8239]
          Length = 502

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF  +LG+++ + A  + R +     K +  +YIS F   G P LV + L   L+F  P 
Sbjct: 309 VFGMILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 361

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 I        F +  I L    +A+IAEI+RS + A+ +GQMEA ++LG+T  +A
Sbjct: 362 ----QVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTRAQA 417

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            + V+LPQA R  IPPL + +++ +K SSLA  +G  +L++
Sbjct: 418 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 458


>gi|17231658|ref|NP_488206.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC
           7120]
 gi|17133301|dbj|BAB75865.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC
           7120]
          Length = 381

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 8/111 (7%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  ++AA++AE VR GL AV RGQ+EAA ALGL       L++LPQA+R++IP L  Q+
Sbjct: 256 GLVLFSAAYMAENVRGGLQAVSRGQVEAAKALGLNTFFVVLLIVLPQALRAVIPALVGQF 315

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILI-----WMFIY 374
           + L K++SL   VG  +L  +  +I+ Q    G+  E+ L      W+F Y
Sbjct: 316 IGLFKDTSLLSLVGLVELTGIARSILAQPQFIGRYAEVYLFIGLIYWLFCY 366


>gi|329295893|ref|ZP_08253229.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 292

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 77/120 (64%), Gaps = 3/120 (2%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           TV   F++  + LS    A+ +E+VR+GL++V  GQ EAA A+G+   +A + ++LPQAM
Sbjct: 153 TVMTPFLAALLGLSINQGAYTSEVVRAGLLSVDTGQYEAAKAIGMPRLQALQRIILPQAM 212

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R I+PP+ +++++++K +SLA  + +++L+    TI     + +E++    IW  I ++L
Sbjct: 213 RVILPPVGNEFISMIKTTSLASMIQYSELLYNAQTIYFANARVMELLFVAGIWYLIIVTL 272


>gi|325063243|gb|ADY66933.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 229

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 72/124 (58%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I LS   AA+++EIVR+G+ AVP+GQ+ AA A+G+T  +  R ++ PQA R IIPPL
Sbjct: 93  STLIGLSLCEAAYLSEIVRAGIAAVPKGQINAARAIGMTEAQVMRYIVAPQAFRIIIPPL 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +    +LK +S+A  +   +L+     +I +    +E+ ++    YL+++    L   R
Sbjct: 153 GNSVNGVLKTTSIASIISMEELLRRTQVLIQEKFLVLELFMVAALYYLAMTTAWELIQRR 212

Query: 388 LNAK 391
           +  +
Sbjct: 213 IEKR 216


>gi|153822068|ref|ZP_01974735.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|126520401|gb|EAZ77624.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
          Length = 279

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 149 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 208

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 209 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 260



 Score = 36.6 bits (83), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P + V+F
Sbjct: 71  GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLF 125


>gi|16264422|ref|NP_437214.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|15140559|emb|CAC49074.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 290

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 102/185 (55%), Gaps = 13/185 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLG- 252
           VLG+V+++   R+S +        L L+ I    +F G P L+ + L + L    P  G 
Sbjct: 87  VLGVVIAIM--RISGN------PVLSLIAIGYIWVFRGAPALLQLMLWFNLALIFPTFGI 138

Query: 253 --QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F F     ++P F++  + L     A+ +E+VRSGL++V  GQ EAA  +G+T  K 
Sbjct: 139 PGLFEFRTVDVMTP-FVAAVLGLGISQGAYTSEVVRSGLLSVDSGQYEAARTIGMTQMKM 197

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQAMR ++PP+ ++ + ++K +SLA  + +++++     I     + +E++L+ 
Sbjct: 198 LRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYSEILHNAQIIYFANTRVLELLLVA 257

Query: 371 MFIYL 375
            F YL
Sbjct: 258 SFWYL 262



 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q    Y  D  +A AIL G  NT  +  + M    ++G ++   R+S N +++ I 
Sbjct: 48  FSVGQIEWSYVRDFLFAPAILAGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSLIA 107

Query: 130 RVYVEVFRNIPPLV 143
             Y+ VFR  P L+
Sbjct: 108 IGYIWVFRGAPALL 121


>gi|298695127|gb|ADI98349.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 485

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|229916228|ref|YP_002884874.1| polar amino acid ABC transporter inner membrane subunit
           [Exiguobacterium sp. AT1b]
 gi|229467657|gb|ACQ69429.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sp. AT1b]
          Length = 219

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 10/168 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ +A+   +HF  P L  +       ++  + S  IA S  + A+I+EI+R+G+ 
Sbjct: 62  GTPLILQLAI---IHFGLPQLTGY-------ITTPYQSAVIAFSLNSGAYISEIIRAGIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EA+ ALG+ + K  R ++LPQA ++I+P L ++ + L K S+L   VG  D++
Sbjct: 112 AVDKGQWEASDALGVPYVKQLRSIILPQAFKNILPALVNEMITLTKESALVSTVGVLDIM 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +  Q     E +L    IY ++ +++     RL  ++   + +
Sbjct: 172 RRAQIVGGQKAIYFEPLLFAGVIYFTIVMILTYLGQRLEKRLRKSDGR 219


>gi|163789546|ref|ZP_02183984.1| hypothetical protein CAT7_08890 [Carnobacterium sp. AT7]
 gi|159875078|gb|EDP69144.1| hypothetical protein CAT7_08890 [Carnobacterium sp. AT7]
          Length = 226

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 111/222 (50%), Gaps = 23/222 (10%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           +GL +   T+  +    +F  VLG +L++      R  + K  + +   YIS   + G P
Sbjct: 24  KGLGY---TLGISLASMIFGTVLGFLLAIM-----RMSNSKILRIIARTYIS--FMRGTP 73

Query: 234 TLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           TLV +   + L+F  P +G QF  +  +          I  S  +AA+ AEI+RS L +V
Sbjct: 74  TLVFL---FILYFGFPFIGIQFEAVNAAI---------IGFSLSSAAYSAEIIRSSLHSV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA ALGL      R V++PQAMR  +PP+++  L+L+K +SLA  +   ++   
Sbjct: 122 DHGQWEAAYALGLKWPFIMRKVIIPQAMRIAVPPMSNVLLDLIKGTSLAAMITVPEIFQQ 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +  +    + + ++   IY ++  +  +F N L  K +L
Sbjct: 182 AKIVGGREFDYMTMYILVALIYWAICSVFTIFQNYLEKKTSL 223



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++ + MI  T++G L+   R+S +K++  I R Y+   R  P LV +F L
Sbjct: 22  ILKGLGYTLGISLASMIFGTVLGFLLAIMRMSNSKILRIIARTYISFMRGTPTLVFLFIL 81

Query: 149 Y 149
           Y
Sbjct: 82  Y 82


>gi|89070520|ref|ZP_01157809.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Oceanicola granulosus HTCC2516]
 gi|89043827|gb|EAR50025.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Oceanicola granulosus HTCC2516]
          Length = 662

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 8/114 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE+VR GL A+P GQ EAA ALGL + K+ RLV+LPQA++  IP + + 
Sbjct: 533 IMVTLFASAYIAEVVRGGLAALPTGQYEAADALGLDYGKSMRLVVLPQALKISIPGIVNT 592

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           ++ L K+++L V +G  D + +  TI   T         W  IY  L + I L 
Sbjct: 593 FIGLFKDTTLVVFIGLLDPIGLSNTIRASTE--------WNGIYWELFVFIGLL 638


>gi|290956092|ref|YP_003487274.1| permease of ABC transporter [Streptomyces scabiei 87.22]
 gi|260645618|emb|CBG68709.1| putative permease component of ABC transporter [Streptomyces
           scabiei 87.22]
          Length = 291

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 76/123 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   AA++AEI+R+ L A+ RGQ EAA ALG+T     R+VLLPQA+R ++PPL ++
Sbjct: 122 LTLAVNEAAYMAEIIRAALDAIDRGQTEAAQALGMTPSLTMRVVLLPQALRIVVPPLGNE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +  ++K++SL   +G  ++     +I + T +  EI L+    YL+L+ + +     +  
Sbjct: 182 FNLMMKSTSLLSVIGLQEMFLTAQSINSATFKTFEIFLVAACYYLALTTVWSFVQRFIER 241

Query: 391 KIA 393
           ++A
Sbjct: 242 RLA 244


>gi|82752008|ref|YP_417749.1| ABC transporter permease [Staphylococcus aureus RF122]
 gi|82657539|emb|CAI81982.1| ABC transporter permease [Staphylococcus aureus RF122]
          Length = 239

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 97/155 (62%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           T+ +  + ++LPQA+R  IP L + +L+L+K++SL
Sbjct: 147 TYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 181


>gi|27382316|ref|NP_773845.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355487|dbj|BAC52470.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 303

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 95/175 (54%), Gaps = 5/175 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAE 283
           T+L  G P ++ + L + L    P +G         V     F++  + L     A+ +E
Sbjct: 126 TWLFRGTPLILQLLLWFNLALVFPTIGIPGLWSARAVDVMTPFLAALLGLGINQGAYTSE 185

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R+G+++V  GQ EAA A+G+   +A R ++LPQAMR +IPPL ++++ ++K +SLA  
Sbjct: 186 VMRAGMLSVDIGQYEAAQAIGMGRLRALRRIVLPQAMRVVIPPLGNEFIGMVKATSLASV 245

Query: 344 VGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +L+     I     + IE++++   W  + +S+   + + + R  A+  L+
Sbjct: 246 IQYPELLHNAENIYYANSRVIELLIVAGLWYLLVVSILTPLQMLLERRFARGTLR 300


>gi|299133837|ref|ZP_07027031.1| polar amino acid ABC transporter, inner membrane subunit [Afipia
           sp. 1NLS2]
 gi|298591673|gb|EFI51874.1| polar amino acid ABC transporter, inner membrane subunit [Afipia
           sp. 1NLS2]
          Length = 454

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 63/96 (65%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G       + + + ++ +  A+ AE++R GL+A+PRGQ EAA ALGL++ K T L++
Sbjct: 307 FLPGDFTIDALVRVLVGIALFAGAYNAEVIRGGLLAIPRGQREAANALGLSYWKTTGLIV 366

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA+R +IP L + ++ L K+++L + V   DL+ 
Sbjct: 367 LPQALRHVIPALVNSFIALFKDTTLVLIVSLFDLLG 402


>gi|82751513|ref|YP_417254.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           RF122]
 gi|82657044|emb|CAI81481.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           RF122]
          Length = 485

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|33596742|ref|NP_884385.1| ABC transporter transmembrane protein [Bordetella parapertussis
           12822]
 gi|33600510|ref|NP_888070.1| ABC transporter transmembrane protein [Bordetella bronchiseptica
           RB50]
 gi|33568109|emb|CAE32022.1| Putative ABC transport system, integral membrane protein
           [Bordetella bronchiseptica RB50]
 gi|33573443|emb|CAE37428.1| Putative ABC transport system, integral membrane protein
           [Bordetella parapertussis]
          Length = 384

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 45/260 (17%)

Query: 163 IVLP---FGMFLNNRGLSFPTLTMDTNAKIFV----------FSFVLGIVLSLFA----- 204
           +VLP   + + +    L  P ++ D    I V          FS  +GIVL+L       
Sbjct: 146 VVLPPLSYALLVGADALGLPHVSTDLWGGILVTLVVSLVGIVFSLPIGIVLALGRRSELP 205

Query: 205 -TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             RL+     + G+ +PL+ +    +F   T++ + L   L  D+               
Sbjct: 206 FVRLASTVAIELGRGVPLITV----LFMFNTMLPLFLPEGLRPDR--------------- 246

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              +   + ++ + +A++AE+VR GL A+P+GQ E A +LGL + + T L++LPQA+R +
Sbjct: 247 --LLRPLVGVTLFASAYMAEVVRGGLQALPKGQYEGAQSLGLGYWQTTFLIVLPQALRIV 304

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII-----LIWMFIYLSLS 378
           +P + + ++ L K+++L   VG  DL+ V    IN    A  +          F Y +  
Sbjct: 305 VPGIVNTFIGLFKDTTLVAMVGILDLLKVVEVAINDPAWATPVTRYTGYAFLAFFYCACC 364

Query: 379 IMIALFMNRLNAKIALKEKK 398
             ++ +   +   +A  EK+
Sbjct: 365 YAMSRYSRSVERTLARSEKR 384


>gi|19552549|ref|NP_600551.1| ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62390213|ref|YP_225615.1| ABC-type amino acid transport system, permease component
           [Corynebacterium glutamicum ATCC 13032]
 gi|21324099|dbj|BAB98724.1| ABC-type transporter, permease components [Corynebacterium
           glutamicum ATCC 13032]
 gi|41325550|emb|CAF21339.1| ABC-type amino acid transport system, permease component
           [Corynebacterium glutamicum ATCC 13032]
          Length = 316

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 59/88 (67%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S +S  F+   I L    AA++AEIVRSG+ AVP GQMEA+ ALG+      R  +LPQA
Sbjct: 146 SLLSNMFLLAVIGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMNWSMTMRRTILPQA 205

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           MR IIPP  ++ +++LK +SL VA+ ++
Sbjct: 206 MRIIIPPTGNELISMLKTTSLVVAIPYS 233


>gi|148544726|ref|YP_001272096.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184154078|ref|YP_001842419.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|194466985|ref|ZP_03072972.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|227363851|ref|ZP_03847956.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|227544433|ref|ZP_03974482.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908280|ref|ZP_07125745.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|325683061|ref|ZP_08162577.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148531760|gb|ABQ83759.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183225422|dbj|BAG25939.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|194454021|gb|EDX42918.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|227071078|gb|EEI09396.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|227185596|gb|EEI65667.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300894527|gb|EFK87884.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|324977411|gb|EGC14362.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 217

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 26/149 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSC 275
           + LPLL I  F  FGLP +                          + PE +   I ALS 
Sbjct: 64  RNLPLLLIIFFTYFGLPNI-------------------------GIKPEIIPAAIMALSI 98

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A +AEIVRSG+ ++  GQ E A+A GLT  +A R+++LPQA+++++P L SQ+++L+
Sbjct: 99  FESAMVAEIVRSGINSIDYGQTEGALANGLTKWQALRIIVLPQAIKNMMPALVSQFISLV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           K++SLA  +   +L+     I  Q    I
Sbjct: 159 KDTSLATIIVLPELMYHAQIIYGQNTNYI 187


>gi|49487195|ref|YP_044416.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|87160289|ref|YP_494993.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196338|ref|YP_501160.1| amino acid ABC transporter permease [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268848|ref|YP_001247791.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150394922|ref|YP_001317597.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|151222524|ref|YP_001333346.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|221141309|ref|ZP_03565802.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253314750|ref|ZP_04837963.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253730086|ref|ZP_04864251.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253734171|ref|ZP_04868336.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|255007187|ref|ZP_05145788.2| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794753|ref|ZP_05643732.1| amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|258439631|ref|ZP_05690377.1| transport system membrane protein [Staphylococcus aureus A9299]
 gi|258442812|ref|ZP_05691372.1| ABC transporter [Staphylococcus aureus A8115]
 gi|258446488|ref|ZP_05694643.1| ABC transporter [Staphylococcus aureus A6300]
 gi|258450395|ref|ZP_05698487.1| transport system membrane protein [Staphylococcus aureus A6224]
 gi|258451282|ref|ZP_05699315.1| transport system membrane protein [Staphylococcus aureus A5948]
 gi|258455229|ref|ZP_05703189.1| amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|269204045|ref|YP_003283314.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282893860|ref|ZP_06302092.1| polar amino acid transport system permease [Staphylococcus aureus
           A8117]
 gi|282920398|ref|ZP_06328121.1| polar amino acid transport system permease [Staphylococcus aureus
           A9765]
 gi|282928446|ref|ZP_06336047.1| ABC transporter ATP-binding protein [Staphylococcus aureus A10102]
 gi|284025433|ref|ZP_06379831.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus 132]
 gi|296276926|ref|ZP_06859433.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297209767|ref|ZP_06926163.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300910779|ref|ZP_07128229.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|304379611|ref|ZP_07362344.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|49245638|emb|CAG44117.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|87126263|gb|ABD20777.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203896|gb|ABD31706.1| amino acid ABC transproter, permease protein, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147741917|gb|ABQ50215.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149947374|gb|ABR53310.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|150375324|dbj|BAF68584.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|253726173|gb|EES94902.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253727866|gb|EES96595.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|257788725|gb|EEV27065.1| amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|257847407|gb|EEV71409.1| transport system membrane protein [Staphylococcus aureus A9299]
 gi|257851933|gb|EEV75867.1| ABC transporter [Staphylococcus aureus A8115]
 gi|257854556|gb|EEV77504.1| ABC transporter [Staphylococcus aureus A6300]
 gi|257856487|gb|EEV79396.1| transport system membrane protein [Staphylococcus aureus A6224]
 gi|257861074|gb|EEV83889.1| transport system membrane protein [Staphylococcus aureus A5948]
 gi|257862440|gb|EEV85208.1| amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|262076335|gb|ACY12308.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269941996|emb|CBI50408.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282589841|gb|EFB94925.1| ABC transporter ATP-binding protein [Staphylococcus aureus A10102]
 gi|282594344|gb|EFB99330.1| polar amino acid transport system permease [Staphylococcus aureus
           A9765]
 gi|282763918|gb|EFC04046.1| polar amino acid transport system permease [Staphylococcus aureus
           A8117]
 gi|296885440|gb|EFH24377.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|298695677|gb|ADI98899.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887759|gb|EFK82954.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|302334042|gb|ADL24235.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus JKD6159]
 gi|302752284|gb|ADL66461.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304341787|gb|EFM07693.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312830759|emb|CBX35601.1| L-cystine transport system permease protein tcyB [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315128573|gb|EFT84577.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|315197389|gb|EFU27726.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|320139119|gb|EFW31001.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320142504|gb|EFW34313.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323439639|gb|EGA97358.1| ABC transporter permease [Staphylococcus aureus O11]
 gi|323442696|gb|EGB00323.1| ABC transporter permease [Staphylococcus aureus O46]
 gi|329315099|gb|AEB89512.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329723591|gb|EGG60120.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329726684|gb|EGG63145.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329730323|gb|EGG66713.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 239

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 97/155 (62%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           T+ +  + ++LPQA+R  IP L + +L+L+K++SL
Sbjct: 147 TYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 181


>gi|282917128|ref|ZP_06324886.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus D139]
 gi|282319615|gb|EFB49967.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus D139]
          Length = 485

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 78/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 420 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 479

Query: 387 RLNA 390
           RLNA
Sbjct: 480 RLNA 483



 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|34495573|ref|NP_899788.1| glutamate/aspartate transport system permease [Chromobacterium
           violaceum ATCC 12472]
 gi|34101428|gb|AAQ57797.1| glutamate/aspartate transport system permease protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 222

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 3/141 (2%)

Query: 255 NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           N+I G+ + P   F S  +A   + AA+ AEIVR+G+ A+P+GQ  AA ALG+ + +   
Sbjct: 82  NWITGN-LEPVGAFTSCLVAFVMFEAAYFAEIVRAGIQAIPKGQAGAAYALGMRYHQVMG 140

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV+LPQA+R ++P L  Q + L +++SL  AVG  D ++   +  +  G   E ++    
Sbjct: 141 LVVLPQALRKMLPLLLQQSIILFQDTSLVYAVGLMDFLNTARSKGDIVGLPHEFLIFAGM 200

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
           +Y  +S   +  + RL  ++A
Sbjct: 201 VYFLISFGASRLVKRLQQRLA 221


>gi|313617524|gb|EFR89869.1| L-cystine transport system permease protein TcyL [Listeria innocua
           FSL S4-378]
 gi|313622668|gb|EFR93035.1| L-cystine transport system permease protein TcyL [Listeria innocua
           FSL J1-023]
          Length = 238

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 24/193 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +          +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVILSL-----PRIYQIPVLNQFARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL  
Sbjct: 83  LSSVFGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNG 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIM 380
                +Y+SLSI+
Sbjct: 197 -----VYISLSII 204


>gi|134100501|ref|YP_001106162.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291005020|ref|ZP_06562993.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133913124|emb|CAM03237.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 315

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 20/208 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+   A   V  F+LG VL++   RLS         AL   Y+  +L   +P LV +  
Sbjct: 76  MTLWLTAVTMVLGFLLGTVLAVM--RLS---GNPVLAALSWGYV--WLFRSIPLLVQLLF 128

Query: 241 KYQLHFDKPVLG-------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + +    PVLG         N IGG+T +       I L  + AA+ AEIVR G+++V 
Sbjct: 129 WFNIGALYPVLGVAPFSVSTVNLIGGTTTA------IIGLVLHEAAYAAEIVRGGILSVD 182

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+A ALG+   +  R ++LPQAMR+IIPP  +  +  LK +S+   +   DL+   
Sbjct: 183 AGQTESAQALGMRKSRVLRRIVLPQAMRAIIPPSGNLLIGTLKGTSIVSVIAVHDLLYSV 242

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMI 381
             I N+    I ++L+    YL ++ ++
Sbjct: 243 QIIYNRNYLVIPLLLVACIWYLVVTTVL 270



 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G + T WL    M+   ++GT++   RLS N ++A +   YV +FR+IP LV + F
Sbjct: 69  AVLHGLLMTLWLTAVTMVLGFLLGTVLAVMRLSGNPVLAALSWGYVWLFRSIPLLVQLLF 128

Query: 148 LYK-----SVLSVLP 157
            +       VL V P
Sbjct: 129 WFNIGALYPVLGVAP 143


>gi|302205790|gb|ADL10132.1| glutamate transporter permease protein GluD [Corynebacterium
           pseudotuberculosis C231]
 gi|308276025|gb|ADO25924.1| glutamate transporter permease protein GluD [Corynebacterium
           pseudotuberculosis I19]
          Length = 312

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 8/123 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P L+LI   YQ       L  +  +    ++  F ++  +L+ Y  A IAEI+R+G+ 
Sbjct: 115 AVPVLLLIIFSYQ------ALAMYKVVPPRELA--FTAVVFSLTMYNGAVIAEILRAGIR 166

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PRGQ EAA ALGL H +  + +LLPQA+ +++P L +Q +  LK+S+L   +G+ ++V
Sbjct: 167 ALPRGQTEAAQALGLGHWQTMQKILLPQAVAAMLPALIAQAVIALKDSALGYQIGYVEIV 226

Query: 351 SVG 353
             G
Sbjct: 227 RQG 229



 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+    ++ T +L G V T   AFS +I A I+G L+G GRLS  + + WIC    E FR
Sbjct: 55  PFIDPRTWNTYLLPGLVGTLKSAFSSVILAIILGVLLGLGRLSRRRSLRWICAAITEFFR 114

Query: 138 NIPPLVVIFFLYKSV 152
            +P L++I F Y+++
Sbjct: 115 AVPVLLLIIFSYQAL 129


>gi|260768538|ref|ZP_05877472.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260616568|gb|EEX41753.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|315180250|gb|ADT87164.1| general L-amino acid transport system permease protein AapM [Vibrio
           furnissii NCTC 11218]
          Length = 365

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 66/98 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 220 FLSEGSETDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LPQA++  IP + + ++ L K++SL + +G  D++ +G
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIG 317


>gi|157376893|ref|YP_001475493.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sediminis HAW-EB3]
 gi|157319267|gb|ABV38365.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sediminis HAW-EB3]
          Length = 226

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 78/123 (63%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQMEAA +LGL+H    + V+LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQMEAARSLGLSHGATMKEVILPQAIKNILPSLGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++ +  S +++++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLLLTYSFTLLLSKFET 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|45358114|ref|NP_987671.1| binding-protein dependent transport system inner membrane protein
           [Methanococcus maripaludis S2]
 gi|44920871|emb|CAF30107.1| Binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis S2]
          Length = 219

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 108/205 (52%), Gaps = 13/205 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI + SF+L +++++           KT   + + Y+  F   G P L+ +   + +++ 
Sbjct: 22  KITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFR--GTPLLIQL---FFIYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        T+S  F ++ + LS    A+I+EI+R+ + +VP GQ EAA +LG+  
Sbjct: 77  LPSIGI-------TMSSTFAAV-LGLSLNGGAYISEIIRAAIQSVPVGQFEAAESLGMGK 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++   ++LPQA R  IPPL + + ++LK SSL   +   +L  +G  I  +T +  EI 
Sbjct: 129 IESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITELTRIGQLIYTRTSRPFEIY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
           L    IYL L  +I++   ++  K+
Sbjct: 189 LTIGLIYLILVSIISIGSWKIEKKL 213


>gi|88856305|ref|ZP_01130964.1| ABC transporter permease protein [marine actinobacterium PHSC20C1]
 gi|88814389|gb|EAR24252.1| ABC transporter permease protein [marine actinobacterium PHSC20C1]
          Length = 319

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 105/203 (51%), Gaps = 8/203 (3%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +    LG++L++   RLS++   +  + +   YI  +L  G P LV + L + L    P
Sbjct: 84  MLIGLTLGVLLAI--ARLSKN---RVMQTVSSGYI--WLFRGTPLLVQLLLWFNLALFFP 136

Query: 250 VLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            LG     +  + +   F +  + L     A++AEIVR G+ +V RGQ+EAA ALG+  R
Sbjct: 137 RLGFGELSVDTNVIITAFGAAILGLGLNEGAYMAEIVRGGIQSVNRGQIEAAAALGMRQR 196

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
             T  ++LPQAMR IIPP+ +  + +LK +SL   +   DL++    I  +     E+++
Sbjct: 197 HVTWRIVLPQAMRVIIPPIGNNLITMLKMTSLVSVIAVPDLLNRAQAISAKNFYVFEMLI 256

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           +    YL ++ +  +   +L  +
Sbjct: 257 VATVWYLLMTTIFTIIQMQLEKR 279


>gi|326692574|ref|ZP_08229579.1| amino acid ABC transporter [Leuconostoc argentinum KCTC 3773]
          Length = 491

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 78/128 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +A+   +AA++AEI+RSG+ +V  GQ EAA +LGL+ RK  R ++LPQA+++I+P
Sbjct: 360 FAAGSLAMGLNSAAYVAEIIRSGINSVDGGQTEAARSLGLSKRKTMRFIVLPQAVKNILP 419

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++++ ++K  S+   +G  +L+   G +   + +    +LI  FIY  L+  I+  +
Sbjct: 420 ALGNEFVTVIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLLIASFIYFVLTFTISRAL 479

Query: 386 NRLNAKIA 393
                ++A
Sbjct: 480 GYAEKRMA 487


>gi|224368641|ref|YP_002603090.1| ABC-type amino acid transporter, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223691357|gb|ACN14640.1| ABC-type amino acid transporter, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 226

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 23/228 (10%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +FL+  G +F    + + A IF+ + V+G++    A R+S+    K  K   + YI   L
Sbjct: 20  LFLHGLGATF----LISTASIFL-ALVVGVIAC--ACRISQI---KYLKYPAIAYIE--L 67

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I   P LV I   Y  +F  P LG           PE  +  +AL   + A+IAEI+R+G
Sbjct: 68  IRSTPLLVQI---YFFYFGLPTLG--------VRIPEIQTGILALMLNSGAYIAEIIRAG 116

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  G +EA I+ GL + +  R ++LPQA+ + IPPL  Q + L+K+S+L   +  A+
Sbjct: 117 ISSVDEGHIEAGISSGLNYVQRMRFIILPQALGATIPPLLGQAIVLVKDSALLSLISVAE 176

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L   G  + ++     E  L   F Y+ +  ++    +    K+  +E
Sbjct: 177 LTRCGQVLTSERFMPTEAFLTVAFFYMCIYFVLKSLADWSQKKLIFRE 224


>gi|57242586|ref|ZP_00370523.1| MW1799 [Campylobacter upsaliensis RM3195]
 gi|57016515|gb|EAL53299.1| MW1799 [Campylobacter upsaliensis RM3195]
          Length = 211

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 86/135 (63%), Gaps = 16/135 (11%)

Query: 266 FMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           F +LY   +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++   R ++LPQA+++
Sbjct: 79  FDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYQSTMREIILPQALKN 138

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFIYLSL 377
           I+P L +++++L K +S+   VGF  +V +  T+ +++ QA+      II   +  Y+S+
Sbjct: 139 ILPALANEFISLFKETSV---VGFISVVDI--TMQSKSLQAVLYNPKPIIFTGLVYYVSV 193

Query: 378 SIM---IALFMNRLN 389
            I    + L   RLN
Sbjct: 194 KIFSLGVRLLEKRLN 208


>gi|282856549|ref|ZP_06265823.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
 gi|282585615|gb|EFB90909.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
          Length = 519

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 8/142 (5%)

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALS 274
           L+I+   +FG   L   A  Y +     PV+ Q  F F G    G  +SP F++  +AL 
Sbjct: 323 LFIAVCRLFGPLPLRAFATGYTEFIRGTPVMIQLFFIFYGLPNVGVQLSP-FVAGTLALG 381

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ +E  R+GL AVPR QME A+ALG+T R+A R V+LPQA+R  + P+T+ ++ L
Sbjct: 382 LNYAAYESENYRAGLEAVPRAQMEGALALGMTKREALRHVILPQAIRVSLLPMTNDFIAL 441

Query: 335 LKNSSLAVAVGFADLVSVGGTI 356
           LK+SSL   +   DL    G +
Sbjct: 442 LKDSSLVSIITLVDLTRTYGQL 463


>gi|227505029|ref|ZP_03935078.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           striatum ATCC 6940]
 gi|227198393|gb|EEI78441.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           striatum ATCC 6940]
          Length = 326

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 4/142 (2%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            S ++  F+   + L    AA++AEIVRSG+ AVP GQ EA+ ALG+      R  +LPQ
Sbjct: 157 ASVLTNAFLLSVLGLGLNEAAYMAEIVRSGISAVPEGQKEASKALGMGWWMTMRRTVLPQ 216

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI---WMFIY 374
           AMR IIPP  +++++LLK SSL VAV +  ++      I     + I ++L+   W  + 
Sbjct: 217 AMRIIIPPTGNEFISLLKTSSLVVAVPYTYEIFGRATDISAALFEPIPLLLVAATWYLVI 276

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
            SL ++   F+ R   + A +E
Sbjct: 277 TSLLMIAQYFLERRFDRGATRE 298


>gi|182419568|ref|ZP_02950816.1| amino acid ABC transporter, permease protein PEB1 [Clostridium
           butyricum 5521]
 gi|237668932|ref|ZP_04528916.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376603|gb|EDT74178.1| amino acid ABC transporter, permease protein PEB1 [Clostridium
           butyricum 5521]
 gi|237657280|gb|EEP54836.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 242

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 61/89 (68%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P F+   + +  Y  A+I+E+VR+G+ ++ +GQ EA+ + G +H +  R ++LPQ ++
Sbjct: 89  VLPVFLIGILGVGIYHGAYISEVVRTGITSISKGQFEASYSQGFSHIETMRYIILPQTIK 148

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            IIPPLT+Q +NL+KN+S+   +  ADL+
Sbjct: 149 IIIPPLTNQLVNLIKNTSVLAMIAGADLM 177



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  +   G+  A ++GT+ G    S  KL+  I RVYVE+ +N P ++ +FFL+
Sbjct: 21  LEGLIVTIEVGLLGLALAIVLGTISGVMSTSKIKLLRIISRVYVEIIQNTPLVIQVFFLF 80

Query: 150 KSVLSVLPIPDHSIVLP 166
                   +P  +IVLP
Sbjct: 81  NG------LPYINIVLP 91


>gi|229591464|ref|YP_002873583.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229363330|emb|CAY50452.1| putative permease component of ABC transporter [Pseudomonas
           fluorescens SBW25]
          Length = 276

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 73/119 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G++ V +GQ  AA ALG+        ++LPQAMR+IIPP TSQ
Sbjct: 147 IALSLNYGAYLSEIFRAGILGVSQGQRNAASALGMGRAVTFWQIVLPQAMRTIIPPTTSQ 206

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     IY  LSI + L   RL 
Sbjct: 207 FISMLKDSSLVSVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVIYWLLSIGLELIQARLE 265


>gi|169796219|ref|YP_001714012.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|184157852|ref|YP_001846191.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|213157047|ref|YP_002319092.1| glutamate/aspartate transport system permease protein GltK
           [Acinetobacter baumannii AB0057]
 gi|215483674|ref|YP_002325895.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|239502271|ref|ZP_04661581.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB900]
 gi|260555281|ref|ZP_05827502.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
 gi|294838746|ref|ZP_06783429.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013113]
 gi|294841309|ref|ZP_06785992.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6014059]
 gi|294859046|ref|ZP_06796815.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013150]
 gi|301347720|ref|ZP_07228461.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB056]
 gi|301512790|ref|ZP_07238027.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB058]
 gi|301596775|ref|ZP_07241783.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB059]
 gi|169149146|emb|CAM87025.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|183209446|gb|ACC56844.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|193077142|gb|ABO11920.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
 gi|213056207|gb|ACJ41109.1| glutamate/aspartate transport system permease protein GltK
           [Acinetobacter baumannii AB0057]
 gi|213988874|gb|ACJ59173.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|260411823|gb|EEX05120.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
 gi|322508167|gb|ADX03621.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii 1656-2]
 gi|323517741|gb|ADX92122.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 225

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F   +   P F S+ +  + + AAF +EIVRSG+ ++ +GQ+ A  ALG T+ ++ R 
Sbjct: 82  FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQSISKGQVNAGYALGFTYGQSMRY 140

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWM 371
           V+LPQA R+++P L +Q + L ++ SL   +   D +    T+ N  G   +    LI  
Sbjct: 141 VVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTLANTYGPETKATFYLIVA 200

Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394
            +Y   S +++  + RL  KIA+
Sbjct: 201 VVYFCSSFVLSQLVKRLQKKIAI 223



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS N L +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNNALASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LY 149
            Y
Sbjct: 74  FY 75


>gi|91789329|ref|YP_550281.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698554|gb|ABE45383.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 216

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 71/122 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AF+ EI R  + A+P+GQ EA  +L L+ R+  + V++PQA++  IPP    
Sbjct: 91  VALTLYTSAFLTEIWRGCVAAIPKGQWEAGQSLALSFRELLQHVVVPQALKIAIPPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K ++LA  +GF +L   G  I N T +   +      +Y +L   ++L+  RL  
Sbjct: 151 LVQVVKGTALASVIGFIELTKAGTMITNATFKPFVVYSCVALLYFALCFPVSLYARRLER 210

Query: 391 KI 392
           K+
Sbjct: 211 KL 212


>gi|289450823|ref|YP_003475334.1| putative arginine ABC transporter permease ArtQ [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289185370|gb|ADC91795.1| putative arginine ABC transporter, permease protein ArtQ
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 229

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 113/203 (55%), Gaps = 19/203 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +F F+LG+ ++    R SR  F     K    +YI  F   G P LV + + Y   F   
Sbjct: 34  LFGFILGLFIAFM--RGSRSPFLSVPAK----IYIQIFR--GTPLLVQVLIAY-YGFASV 84

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +  ++N++     +P  +SL IA+   ++A+++E++RSG+ +V RGQ EAA +LG+  ++
Sbjct: 85  IPNEYNYLK----NPLVLSL-IAICMNSSAYVSEVIRSGINSVDRGQFEAASSLGMKKKQ 139

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIE 365
               ++LPQA+++++P L ++++ L+K S++   VG  DL+       G+ +      + 
Sbjct: 140 IMYYIILPQAIKTVLPALGNEFITLIKESAIVAFVGIGDLMYQAKIAQGSTLKPFMPYVT 199

Query: 366 IILIWMFIYLSLSIMIALFMNRL 388
             LI++ +   LS +I+LF  RL
Sbjct: 200 AALIYLVLVTVLSKVISLFERRL 222


>gi|299535497|ref|ZP_07048818.1| polar amino acid transport system permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298728697|gb|EFI69251.1| polar amino acid transport system permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 234

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 20/196 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I VFS + G++L +    + +  H    K +  +YIS   I G P LV + L +   + 
Sbjct: 26  EILVFSILFGMMLGI-VLAIPKLLHIPILKQVITIYIS--FIRGTPILVQLFLVF---YG 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALG 304
            P L +   I  + +     ++Y  +  YT   AA  AEI R+ ++ V RGQMEAA ++G
Sbjct: 80  IPALLKLIHIDVTRMD----AMYFVIITYTFSNAAAFAEIFRAAILTVDRGQMEAAYSVG 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +A   ++ PQA+R   P + +  ++ LK++SLA ++G  D+V  G T+I  T +A 
Sbjct: 136 LSGSQAFMRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRGETLIASTTRAF 195

Query: 365 EIILIWMFIYLSLSIM 380
           E       IY++LSI+
Sbjct: 196 E-------IYVALSIV 204


>gi|145295472|ref|YP_001138293.1| hypothetical protein cgR_1405 [Corynebacterium glutamicum R]
 gi|140845392|dbj|BAF54391.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 316

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 59/88 (67%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S +S  F+   I L    AA++AEIVRSG+ AVP GQMEA+ ALG+      R  +LPQA
Sbjct: 146 SLLSNMFLLAVIGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMNWSMTMRRTILPQA 205

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           MR IIPP  ++ +++LK +SL VA+ ++
Sbjct: 206 MRIIIPPTGNELISMLKTTSLVVAIPYS 233


>gi|89069637|ref|ZP_01156976.1| putative amino-acid transport system permease abc transporter
           protein [Oceanicola granulosus HTCC2516]
 gi|89044835|gb|EAR50935.1| putative amino-acid transport system permease abc transporter
           protein [Oceanicola granulosus HTCC2516]
          Length = 264

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 68/109 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +AFIAE+ R+GL +V  GQ+EAA ALGL+  +  R V+ PQA R I+PPL + 
Sbjct: 137 MALSIGYSAFIAEVFRAGLQSVDEGQVEAAEALGLSPWRRFRHVVFPQAFRRILPPLGND 196

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           ++ ++K+SSL   +G AD+  +G        +  E   +  FIYL ++I
Sbjct: 197 FVAMVKDSSLVSVLGVADVTQMGKVTAAGNFRYFETYNMVAFIYLVMTI 245


>gi|47569425|ref|ZP_00240107.1| cystine transport system permease protein [Bacillus cereus G9241]
 gi|47553933|gb|EAL12302.1| cystine transport system permease protein [Bacillus cereus G9241]
          Length = 285

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 144 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 203

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++    +N L  
Sbjct: 204 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLETYIIVGLYYLVLVLLFTYLVNLLEK 263

Query: 391 KIALKE 396
           ++  KE
Sbjct: 264 RLQRKE 269


>gi|306821309|ref|ZP_07454919.1| polar amino acid ABC superfamily ATP binding cassette transporter
           permease [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550650|gb|EFM38631.1| polar amino acid ABC superfamily ATP binding cassette transporter
           permease [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 204

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 111/201 (55%), Gaps = 21/201 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G+VL+ F  RLS+    K    +   YI   LI G P L  I L   + F     G +
Sbjct: 16  LIGLVLAFF--RLSKA---KILNLISTTYIE--LIRGTPLLAQIML---VKF-----GLY 60

Query: 255 NFIGGST-VS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           + I   T +S P+     IA+S  + A++ EI+RSG+ +V +GQMEA  +LG++     R
Sbjct: 61  DLITAKTKISIPDIAIGIIAVSLNSGAYVCEIIRSGISSVDKGQMEAGRSLGMSKSMTMR 120

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IIL 368
           L++LP A+++I+P L ++++ ++K +S+   +G  DL  +   + + T ++ E    + L
Sbjct: 121 LIVLPLAVKNILPALCNEFVTVIKETSIISYIGVTDLFYIANAVSSMTYKSFESMLAVAL 180

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
           I+  I  +LS ++ L   RL+
Sbjct: 181 IYFIITFTLSKLVRLLERRLS 201


>gi|77456537|ref|YP_346042.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380540|gb|ABA72053.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 229

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 103/191 (53%), Gaps = 17/191 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I L +   R S+ ++ +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLLLAIPLGI--ARSSKLWYVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +  S++ P     F      ++ +TAA+IAEI+R  + A+P G
Sbjct: 71  LVYY------GLAQFDAVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T
Sbjct: 125 EIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMART 184

Query: 356 IINQTGQAIEI 366
           II +T   +EI
Sbjct: 185 IIARTYLPVEI 195


>gi|26987805|ref|NP_743230.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982502|gb|AAN66694.1|AE016297_8 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 223

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 23/206 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           VLG +L+L     S+      G      +++PLL + T+    +P      L++    D 
Sbjct: 35  VLGTILALMRLSSSKLLSNLAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV               F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG+ + 
Sbjct: 91  PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G++ E ++
Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               +Y  +S   +  + RL  +I++
Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRISV 223


>gi|27379559|ref|NP_771088.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27352711|dbj|BAC49713.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 506

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 56/81 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ +T A+ AE VR GL A+PRGQ EAA ALGL+  K T L++LPQA+R +IP L + 
Sbjct: 374 IGIALFTGAYQAENVRGGLAAIPRGQGEAAAALGLSWWKTTSLIVLPQALRHVIPNLVNS 433

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +++L K++SL   V   DL+ 
Sbjct: 434 FISLFKDTSLVSIVALFDLLG 454


>gi|330960989|gb|EGH61249.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 220

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 73/129 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + +AEIVR  L A+PRGQ+EA  A+GL   +  R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVAEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIKLLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|294497334|ref|YP_003561034.1| L-cystine import ABC transporter permease TcyB [Bacillus megaterium
           QM B1551]
 gi|294347271|gb|ADE67600.1| L-cystine import ABC transporter, permease protein TcyB [Bacillus
           megaterium QM B1551]
          Length = 234

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 90/149 (60%), Gaps = 14/149 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +FVLGI+L++  T L+R    K    +  +Y+S  +I G P LV +   + + +  P L 
Sbjct: 43  TFVLGIILAVL-TALARLSSIKVLNIIARIYVS--IIRGTPLLVQL---FIIFYGLPNLD 96

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                   T+ P F+S  I  S    A+ +EI+R+ + ++P+GQ EA  +LG+T+ +A R
Sbjct: 97  -------ITIDP-FISAIIGFSLSVGAYASEIIRAAIQSIPKGQWEAGYSLGMTYSQALR 148

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++LPQA R  IPPL++ +++L+K++SLA
Sbjct: 149 RIILPQAARVSIPPLSNSFISLIKDTSLA 177


>gi|302874468|ref|YP_003843101.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|307690925|ref|ZP_07633371.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|302577325|gb|ADL51337.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
          Length = 216

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  I L   + A++ EIVRSG+ ++ +GQ EAA ALG T+    + ++LPQ  +
Sbjct: 84  LSP-FVASMIVLGLNSGAYMTEIVRSGIQSIDKGQFEAAKALGFTYGDTMKKIILPQTFK 142

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            IIPPL ++++ +LK++SLA  +   ++++    + N T    E  L     YL L+ + 
Sbjct: 143 VIIPPLGNEFITILKDTSLASTITLTEVLNNAKKVANSTFSPAEPYLTAAVFYLFLTTIF 202

Query: 382 ALFMNRLNAKIAL 394
                ++  K+++
Sbjct: 203 TYVFKKIEKKLSV 215


>gi|33603522|ref|NP_891082.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33577646|emb|CAE34911.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 229

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 1/173 (0%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTA 278
           PL  ++   + GL  L LI + +  +F  P +G +    G  +    F S  I  + + A
Sbjct: 52  PLSAVAAAYVNGLRALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEA 111

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+R+G+ ++PRGQ  AA A+GL + +    V+LPQA+R++ P L +Q + L +++
Sbjct: 112 AYFCEIMRAGIQSIPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDT 171

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SL   +   D +  G  +  +  + +E+ L    +Y  +S   + F++ L  +
Sbjct: 172 SLVYVLSLTDFLGAGINVAQRDNRLVEMYLFVAAVYFVMSFAASRFVHYLQQR 224


>gi|315037358|ref|YP_004030926.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112]
 gi|325955825|ref|YP_004286435.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC]
 gi|312275491|gb|ADQ58131.1| putative glutamine ABC transporter [Lactobacillus amylovorus GRL
           1112]
 gi|325332390|gb|ADZ06298.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC]
          Length = 537

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 73/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 450

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N
Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506



 Score = 37.0 bits (84), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG +  +     T+   Y   I+ G   T  LA  G I    IG LVG           
Sbjct: 280 KAGNQTKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 339

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A   V W+  VYVE+FR  P +V    +Y
Sbjct: 340 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 372


>gi|300858068|ref|YP_003783051.1| glutamate ABC transporter permease [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685522|gb|ADK28444.1| glutamate ABC transport system permease protein [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302330349|gb|ADL20543.1| glutamate transporter permease protein GluD [Corynebacterium
           pseudotuberculosis 1002]
          Length = 312

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 74/123 (60%), Gaps = 8/123 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P L+LI   YQ       L  +  +    ++  F ++  +L+ Y  A IAEI+R+G+ 
Sbjct: 115 AVPVLLLIIFSYQ------ALAMYKVVPPRELA--FTAVVFSLTMYNGAVIAEILRAGIR 166

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PRGQ EAA ALGL H +  + +LLPQA+ +++P L +Q +  LK+S+L   +G+ ++V
Sbjct: 167 ALPRGQTEAAQALGLGHWQTMQKILLPQAVAAMLPALIAQAVIALKDSALGYQIGYVEIV 226

Query: 351 SVG 353
             G
Sbjct: 227 RQG 229



 Score = 39.7 bits (91), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+    ++ T +L G V T   AFS +I A I+G L+G GRLS  + + WIC    E FR
Sbjct: 55  PFIDPRTWNTYLLPGLVGTLKSAFSSVILAIILGVLLGLGRLSRRRSLRWICAAITEFFR 114

Query: 138 NIPPLVVIFFLYKSV 152
            +P L++I F Y+++
Sbjct: 115 AVPVLLLIIFSYQAL 129


>gi|300812584|ref|ZP_07093001.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496457|gb|EFK31562.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 500

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 76/131 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+  K  R V+ PQA+++I
Sbjct: 365 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQSKTYRYVVFPQALKNI 424

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ L K+SSL   +G  +L+   G +   T + +  + I M IY  ++ ++  
Sbjct: 425 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFILTR 484

Query: 384 FMNRLNAKIAL 394
            +N    ++ L
Sbjct: 485 LLNYFERRMNL 495



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            +N   NN +K +L     ++   A            S S YA+    G   T  +    
Sbjct: 250 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYASYFATGLGYTMIITICS 308

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +    ++G +    RLS NKL+  I   Y+E  R  P +V I F+Y
Sbjct: 309 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 354


>gi|262404014|ref|ZP_06080569.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
 gi|262349046|gb|EEY98184.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
          Length = 279

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 149 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 208

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 209 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWVFCF 260


>gi|317054413|ref|YP_004118438.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952408|gb|ADU71882.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 307

 Score = 79.3 bits (194), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 28/234 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLV 236
           +T+   A   V  F  G VL+L   RLS +         P+L    +  T+   G+P LV
Sbjct: 65  MTLQLTAISVVLGFAFGTVLALM--RLSSN---------PVLVAVSWAYTWFFRGVPMLV 113

Query: 237 LIALKY-------QLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            + L Y       ++    P LG+ ++    S VSP F +  IAL  + +A+ AEIVR+G
Sbjct: 114 QLFLWYNIAALYPKIALSIPGLGEIWSAQSNSLVSP-FSAAVIALVMHQSAYAAEIVRAG 172

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  GQ+EAA ALG    +  R  +LPQAMR+I+PP  ++ +  LK +++   +   D
Sbjct: 173 IQSVGNGQLEAARALGYRPAQIFRHTVLPQAMRAIMPPAGNEIIGQLKTTAVVSVISLQD 232

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK-IALKEKK 398
           ++     I  +T + I ++L+    YL ++ ++++   ++ R   + +  +EK+
Sbjct: 233 VLFSAQIIYQRTYEVIPLLLVATLWYLLMTSVLSVGQYYVERYFGRGVTRREKR 286


>gi|304438666|ref|ZP_07398604.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368315|gb|EFM22002.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 214

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 109/205 (53%), Gaps = 19/205 (9%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +IF  +  L + L LF    RLSR F   +     +L I  +++ G P ++ +   Y   
Sbjct: 20  EIFCVTLALSLPLGLFVALGRLSR-FRPLSR----ILEIYIWIMRGTPLMLQLLFVY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P++G         + P+  +  +A     AA+ AEI R+G+ AVPRGQ EAA  LG+
Sbjct: 72  FALPMVG--------ILLPDIAAALLAFVLNYAAYFAEIFRAGIQAVPRGQFEAARVLGM 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R ++LPQ +R  +PP++++ +NL+K++SL   +   DL+ V  TI+ +      
Sbjct: 124 SGPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTP 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390
           +++  +F YL+++ ++     +L A
Sbjct: 184 LLIAGIF-YLAMTAVLTYGFKKLEA 207


>gi|154686658|ref|YP_001421819.1| YqiY [Bacillus amyloliquefaciens FZB42]
 gi|154352509|gb|ABS74588.1| YqiY [Bacillus amyloliquefaciens FZB42]
          Length = 219

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V   VLGIVLSLF        +    F+    +  PL+     + FG+P L    L +Q+
Sbjct: 31  VIGLVLGIVLSLFKISTISPLKWIADFYTSIFRGTPLVLQLMIIYFGMPQL----LGFQI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                               +F +   ALS  +AA+++EI+R+G+ A+ +GQ EAA+ALG
Sbjct: 87  D-------------------QFWAAVTALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           + + K  + +LLPQA ++I P + ++ + L K S++   +G  D++
Sbjct: 128 VPYGKMMKDLLLPQAFKNISPAIINELITLTKESAIVTVIGLGDIM 173


>gi|26991114|ref|NP_746539.1| amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|24986152|gb|AAN70003.1|AE016638_11 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 218

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 78/125 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + A ++AE+ RSGL AVPRGQ EA  AL ++   A R ++LPQA+R I+PP+ + 
Sbjct: 94  LGIGLHYACYLAEVYRSGLDAVPRGQWEAVTALNMSPSLAYRNIILPQALRPILPPVGNY 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +LK++ +  A+   +++     I ++T + +E I +    +L+LSI++A  + R+ A
Sbjct: 154 LVAMLKDTPVLSAITVVEIMQQAKNIGSETFRYLEPITMVGVFFLALSIVLAYLVRRVEA 213

Query: 391 KIALK 395
           ++  K
Sbjct: 214 RLEQK 218


>gi|328956869|ref|YP_004374255.1| glutamine transport system permease protein GlnP [Carnobacterium
           sp. 17-4]
 gi|328673193|gb|AEB29239.1| glutamine transport system permease protein GlnP [Carnobacterium
           sp. 17-4]
          Length = 216

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 31/210 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           VFSF++G +L L        F +  G      + LPLL I  F  F LP    I ++  +
Sbjct: 31  VFSFIIGAILGLLRYMKIPVFSKIVGGIVDLIRNLPLLLIIFFTYFALPQ---IGIRLDI 87

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F S   A++ + +A ++EI+R+GL +VP GQMEA  + G
Sbjct: 88  ---------------------FWSAVAAMTIFESAMLSEIMRAGLNSVPSGQMEAGRSTG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363
           LT+ +   ++++PQA ++++PP+ SQ ++L+K++SLA  +   +L      I  Q T   
Sbjct: 127 LTYLQTLWIIIIPQAFKAMVPPIVSQLVSLIKDTSLATIISLPELTHNARIIYGQNTTYV 186

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I + +   F Y  +   ++    R   K++
Sbjct: 187 IPMFIALAFFYFIICYALSKVAKRFETKLS 216


>gi|327182662|gb|AEA31109.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118]
          Length = 537

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 73/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 450

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N
Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG +  +     T+   Y   I+ G   T  LA  G I    IG LVG           
Sbjct: 280 KAGNQTKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 339

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A   V W+  VYVE+FR  P +V    +Y
Sbjct: 340 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 372


>gi|28379592|ref|NP_786484.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254557736|ref|YP_003064153.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300769532|ref|ZP_07079418.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308181822|ref|YP_003925950.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28272432|emb|CAD65356.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254046663|gb|ACT63456.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300492947|gb|EFK28129.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308047313|gb|ADN99856.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 235

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 4/175 (2%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + SF+LG++L++F   +      + G  L L  I+ F ++   +  L+   + ++F  
Sbjct: 26  IAIISFILGLILAIFTALV--KISTRRGWFLILKAIANFYVWLFRSTPLLVQLFIVYFGL 83

Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P L  +  F  G  + P + +     S  T A+ AE +R+ ++++P+GQ EAA ++G+T 
Sbjct: 84  PYLKIKGLFPNGVQLDP-WTAGIATFSLNTGAYCAETIRAAILSIPQGQWEAAYSIGMTK 142

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            +  + ++LPQA R  +PPL++ +++L+K++SLA ++   ++  V   I  Q  Q
Sbjct: 143 SQVLKRIILPQAARVSLPPLSNSFISLVKDTSLAASITIIEMFEVSQQIAAQNYQ 197


>gi|295702707|ref|YP_003595782.1| L-cystine import ABC transporter permease TcyB [Bacillus megaterium
           DSM 319]
 gi|294800366|gb|ADF37432.1| L-cystine import ABC transporter, permease protein TcyB [Bacillus
           megaterium DSM 319]
          Length = 237

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 90/149 (60%), Gaps = 14/149 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +FVLGI+L++  T L+R    K    +  +Y+S  +I G P LV +   + + +  P L 
Sbjct: 46  TFVLGIILAVL-TALARLSSIKVLNIIARIYVS--IIRGTPLLVQL---FIIFYGLPNLD 99

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                   T+ P F+S  I  S    A+ +EI+R+ + ++P+GQ EA  +LG+T+ +A R
Sbjct: 100 -------ITIDP-FISAVIGFSLSVGAYASEIIRAAIQSIPKGQWEAGYSLGMTYSQALR 151

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++LPQA R  IPPL++ +++L+K++SLA
Sbjct: 152 RIILPQAARVSIPPLSNSFISLIKDTSLA 180


>gi|213854563|ref|ZP_03382803.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 147

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++P
Sbjct: 18  FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLP 77

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL ++++++  +
Sbjct: 78  PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFIL 137

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 138 RRLERRMKI 146


>gi|163941903|ref|YP_001646787.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|163864100|gb|ABY45159.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
          Length = 219

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 87  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYSKMMRNIIFPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYILVIILTL 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKTIEGRM 215


>gi|241204561|ref|YP_002975657.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858451|gb|ACS56118.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 225

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 8/117 (6%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+A  Y L+F  P LG         + PE +   +ALS  + A+IAEI+R+G++++ RGQ
Sbjct: 69  LLAQLYFLYFGLPRLG--------FILPELVVGILALSLNSGAYIAEIIRAGILSIHRGQ 120

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +EA IA G+T  +  R V+LPQA +  IPPL  Q + L+K+S+L   +  A+L   G
Sbjct: 121 VEAGIASGMTFIQRMRFVILPQAFKVTIPPLLGQAIVLVKDSALLSLISVAELTRAG 177


>gi|104774800|ref|YP_619780.1| glutamine ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103423881|emb|CAI98922.1| Glutamine ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 486

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 34/258 (13%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200
           +V  +  K V+    + D SI+   G+  +N G     L M     I   + + V G++L
Sbjct: 253 IVNKYTSKKVVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 309

Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +      + +H          + +P++ ++ F+  G+PTL    L ++L          
Sbjct: 310 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 355

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                    P F +  + L     A+I  IVR G  +V  GQ EAA +LGL + KA   V
Sbjct: 356 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 406

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQ  + +IP L +Q++  LK++S+  A+G  DL   G  +I Q  Q  ++ LI   +Y
Sbjct: 407 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGANLIAQNFQGFKMWLIIAVMY 466

Query: 375 LSLSIMIALFMNRLNAKI 392
           L +  ++    N +  K+
Sbjct: 467 LIIITLLTWLSNYIQKKM 484


>gi|296877227|ref|ZP_06901267.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431747|gb|EFH17554.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 230

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 29/199 (14%)

Query: 212 HEKTGKALPLLYIST----------FLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +K G  L   Y+ T          FL+F GLP      L + L  D     +F F+   
Sbjct: 48  EDKVGAGLAKGYVFTLRCTPPIVLLFLVFYGLPQF----LNWWLGIDIDHWSKFVFV--- 100

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     +A+    AA I+E+ ++  +A+P+GQMEA +++GLT  +    ++LPQA 
Sbjct: 101 ---------LVAMFLLFAAMISEVFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLS 378
           R  +P +T+  LNL+++++LA  +GF D++  G  +I  N    ++E       IY  ++
Sbjct: 152 RVALPNMTTAILNLMRDAALAYTIGFIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIA 211

Query: 379 IMIALFMNRLNAKIALKEK 397
           ++I+     L  ++++ E+
Sbjct: 212 LVISFSAQLLEKRLSVTER 230


>gi|289673930|ref|ZP_06494820.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 166

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 37  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 96

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 97  TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 156

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 157 RQIEKRVAL 165


>gi|262050150|ref|ZP_06023004.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30]
 gi|262052687|ref|ZP_06024879.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3]
 gi|259159436|gb|EEW44488.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3]
 gi|259161775|gb|EEW46363.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30]
          Length = 441

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 61/80 (76%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 316 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 375

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 376 FVTLIKESSIVSTIGVGEIM 395



 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 231 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 290

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 291 VQVFIVF 297


>gi|254469494|ref|ZP_05082899.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211961329|gb|EEA96524.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 372

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 18/186 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LTM        FS  +GIVL+L     SR  +    K+L +++I    I G+P + L+ +
Sbjct: 168 LTMIIGVSGISFSLPIGIVLAL-----SRSSNLPIVKSLAVIFIE--FIRGVPLITLLFV 220

Query: 241 KYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            + L ++  P    F+ +         + + I ++ + +A++AE++R GL A+P+GQ EA
Sbjct: 221 AHVLLNYFLPKGVNFDIV---------LRVVIMVTLFASAYMAEVIRGGLAALPKGQYEA 271

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIIN 358
           A ALGL++ ++ RL++LPQA++  IP + + ++ L K+++L + +G  D +  V  T+ +
Sbjct: 272 ADALGLSYWQSMRLIILPQALKISIPGIVNTFIGLFKDTTLVLIIGLMDPLGLVAPTLAD 331

Query: 359 QTGQAI 364
           Q    I
Sbjct: 332 QRWNGI 337


>gi|251799196|ref|YP_003013927.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247546822|gb|ACT03841.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 236

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251
           FV+G++     T L+R +       L   Y++   I G P L  + L Y   F  P+L  
Sbjct: 34  FVIGVI-----TALARIYRIPVLSQLSSGYVT--FIRGTPMLTHLLLIY---FGLPMLVD 83

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               QF+    S   P     YI+ S    A+++E+VRSGL+AV RGQMEAA ++G+T  
Sbjct: 84  GLSAQFDLGWNSAKIPMIGFAYISFSITAGAYLSEVVRSGLLAVDRGQMEAARSIGMTTP 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A R ++ PQA+ + +P L++  + +L  S+LA  V   DL +    + +   +  E  +
Sbjct: 144 QALRRIVFPQALAASLPNLSNSVIGMLHGSTLAFTVSVVDLNAKAQIVASTNWKFFESYV 203

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I+  L+I+I      +  +I +  K
Sbjct: 204 AAALIFWGLTILIERCTGLIERRIRVYSK 232


>gi|153012083|ref|YP_001373294.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563971|gb|ABS17465.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 307

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 75/128 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+++EI+RSGL++V  GQ +AA +LG+T+ KA   ++LPQAM  IIPP  +Q
Sbjct: 162 LGLGLNEGAYMSEIIRSGLMSVEPGQKQAAKSLGMTNGKALWRIILPQAMPVIIPPTGNQ 221

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +LK SSL   +  ADL+    TI ++  Q I ++++    YL+ + +++    R+  
Sbjct: 222 TIGMLKTSSLVSVISLADLLYSAQTIYSRNFQTIPLLIVACIWYLAATTILSAAQVRIER 281

Query: 391 KIALKEKK 398
                 ++
Sbjct: 282 HFGRSNQQ 289



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 24/136 (17%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           I A LL +  L+CV      M  +N + G   + E            Y  DS     IL 
Sbjct: 30  IAATLLIIFILYCVK-----MIAANPNFGWNVVGE------------YLFDSR----ILW 68

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T WL    M    ++GT++    +S N +++ +   Y+  FR  P LV + F Y  
Sbjct: 69  GLYLTLWLTVVTMAIGVVLGTILAIMAMSNNIVISNVANAYIWFFRGTPVLVQLIFWYN- 127

Query: 152 VLSVLPIPDHSIVLPF 167
            L  L  P+ SI LPF
Sbjct: 128 -LGAL-FPEMSIGLPF 141


>gi|296103260|ref|YP_003613406.1| glutamine ABC transporter permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057719|gb|ADF62457.1| glutamine ABC transporter permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 219

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 80/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++P
Sbjct: 90  FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      +YL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVVYLIITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRMKI 218


>gi|33591319|ref|NP_878963.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
 gi|33570961|emb|CAE40433.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
          Length = 229

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 1/173 (0%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTA 278
           PL  ++   + GL  L LI + +  +F  P +G +    G  +    F S  I  + + A
Sbjct: 52  PLSAVAAAYVNGLRALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEA 111

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+R+G+ ++PRGQ  AA A+GL + +    V+LPQA+R++ P L +Q + L +++
Sbjct: 112 AYFCEIMRAGIQSIPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDT 171

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SL   +   D +  G  +  +  + +E+ L    +Y  +S   + F++ L  +
Sbjct: 172 SLVYVLSLTDFLGAGINVAQRDNRLVEMYLFVAAVYFVMSFAASRFVHYLQQR 224


>gi|253575107|ref|ZP_04852446.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845563|gb|EES73572.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 236

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 114/230 (49%), Gaps = 24/230 (10%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTF---LIFGL 232
           + PT  M T   + V  FV+G++ +LF  RL R         +P+L  IST     I G 
Sbjct: 18  AIPTTLMITAVSVSV-GFVIGVITALF--RLYR---------VPVLGQISTAYVTFIRGT 65

Query: 233 PTLVLIALKYQLHFDKPVL-----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P L  + L Y   F  PV+       F +   S   P     YI+ S    A+++E+VRS
Sbjct: 66  PMLTHLLLIY---FGLPVIIDGLSEGFGWGFKSASIPMIAFAYISFSITAGAYMSEVVRS 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL+AV RGQ+EAA ++G+T  +A R ++ PQA+   +P L++  + +L  S+LA  V   
Sbjct: 123 GLLAVNRGQLEAAYSIGMTTFQALRRIVFPQALAFSLPNLSNSAIGMLHGSTLAFTVSVV 182

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           D+ +    + +   +  E  +    I+  L+++I     RL  +I L  +
Sbjct: 183 DINAKAQIVASTNWKFFEAYVAAALIFWGLTVLIERLTARLEKRIQLYNR 232


>gi|239813181|ref|YP_002942091.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239799758|gb|ACS16825.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 222

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 77/129 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+ A+++EIVR  + ++ +GQ  AA +LG+T   A R ++LPQA+  +
Sbjct: 87  PAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQSLGMTPGTAMREIVLPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   D++  G  II+ + +++E+ L    +Y  L+  + L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRSLEVYLAIALVYFVLTGTMTL 206

Query: 384 FMNRLNAKI 392
            +     K+
Sbjct: 207 VLRHFEQKL 215


>gi|308186011|ref|YP_003930142.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056521|gb|ADO08693.1| putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 315

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 68/104 (65%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   AA++AEI+R+GL++V  GQ+E   A G++  +A R +++PQAMRSIIPP  +Q 
Sbjct: 167 GLALNEAAYMAEIIRAGLLSVDNGQVETTQAFGMSRSRALRRIIIPQAMRSIIPPTGNQL 226

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++++K +SL   +   DL+     I N+T + I ++++ +  YL
Sbjct: 227 ISMIKATSLVSVIAMGDLLYSVQAIYNRTFEIIPMLMVAVIWYL 270


>gi|262165599|ref|ZP_06033336.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262025315|gb|EEY43983.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 365

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346


>gi|260774979|ref|ZP_05883879.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260609069|gb|EEX35228.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 223

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+      VFS +L ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMATWGLVFSLILAVILANI-----RVFRVPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F F+ G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQI--FPFLVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|227529453|ref|ZP_03959502.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350538|gb|EEJ40829.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Lactobacillus vaginalis
           ATCC 49540]
          Length = 204

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 81/128 (63%), Gaps = 4/128 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F++  +AL+ Y+ A+IAEI+RSG+ ++P GQ EAA +LG+   +    ++LPQA ++I+
Sbjct: 73  DFVTGIVALTLYSGAYIAEIIRSGIQSLPVGQTEAAESLGIPSYRILLNIILPQAFKNIL 132

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIM 380
           P L +Q +  +K+SSL   +G  D++    T+   T   +E ++I    ++ I L L+ +
Sbjct: 133 PALGNQLIGNVKDSSLVSVLGITDIMFAAQTVRGSTALGLEPMIIASALYLVICLILNQI 192

Query: 381 IALFMNRL 388
           +ALF  R+
Sbjct: 193 LALFERRM 200


>gi|65317794|ref|ZP_00390753.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
          Length = 233

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 11  TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 66

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 67  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG A+L   G
Sbjct: 115 RGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++    +N L  ++  KE
Sbjct: 175 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 217



 Score = 36.2 bits (82), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 10  STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 68

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 69  VQIAILYFGITSVV 82


>gi|291004254|ref|ZP_06562227.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 216

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 5/110 (4%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IAL+ YT+AF+ E++RSG+  VP GQ EAA ++GL   ++   V+LPQA R++
Sbjct: 84  PFFTAAVIALTVYTSAFVCEVLRSGINTVPVGQAEAARSIGLGFAQSLTNVILPQAFRAV 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWM 371
           +PP+ S  + LLKN++  VA GF+ +  VG  I  +N+ G+      +W+
Sbjct: 144 VPPMVSVLIALLKNTT--VAAGFS-VNEVGSVIPFLNEEGEPTINAFVWI 190


>gi|258627558|ref|ZP_05722335.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258580140|gb|EEW05112.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
          Length = 365

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346


>gi|227530173|ref|ZP_03960222.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227349926|gb|EEJ40217.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 217

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 36/204 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    + SF++G +L +      ++     G      + LPLL I  F  FGLP 
Sbjct: 22  ITIEISVASIICSFIIGTLLGIIRYAKIKYVSAIVGFIIDLIRNLPLLLIIFFTYFGLPN 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVP 293
           +                          V PE +   I AL+ + ++ +AEIVRSG+ ++ 
Sbjct: 82  I-------------------------GVKPEIIPAAIMALTVFESSMVAEIVRSGINSID 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             Q E A+A GLT  +A RL++LPQA+++++P L SQ+++L+K++SLA  +   +L+   
Sbjct: 117 YAQTEGALANGLTKWQALRLIVLPQAIKNMLPALVSQFISLVKDTSLATIIVLPELMYHA 176

Query: 354 GTIINQTGQAIEIILIWMFIYLSL 377
             I  Q    I    I MF+ L++
Sbjct: 177 QIIYGQNTNYI----IPMFVALAV 196



 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++ + +I + IIGTL+G  R +  K V+ I    +++ RN+P L++IFF 
Sbjct: 16  LLQGLGITIEISVASIICSFIIGTLLGIIRYAKIKYVSAIVGFIIDLIRNLPLLLIIFFT 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|42783270|ref|NP_980517.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206976334|ref|ZP_03237242.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217961644|ref|YP_002340214.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|222097601|ref|YP_002531658.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1]
 gi|42739198|gb|AAS43125.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206745530|gb|EDZ56929.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217066079|gb|ACJ80329.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|221241659|gb|ACM14369.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1]
          Length = 219

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 87  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKAIEGRM 215


>gi|328958175|ref|YP_004375561.1| putative ABC transporter [Carnobacterium sp. 17-4]
 gi|328674499|gb|AEB30545.1| putative ABC transporter [Carnobacterium sp. 17-4]
          Length = 226

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 20/205 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  +LG +L++   R+S     K    +   YIS   + G PTLV +   + L+F  P 
Sbjct: 38  IFGTILGFLLAI--MRMST---SKIVSMIARTYIS--FMRGTPTLVFL---FILYFGFPF 87

Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +G QF  +  +          I  S  +AA+ AEI+RS L +V  GQ EAA ALGL    
Sbjct: 88  IGIQFKAVNAAI---------IGFSLSSAAYSAEIIRSSLHSVDHGQWEAAYALGLKWSF 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V++PQAMR  IPP+++ +L+L+K +SLA  +   ++      +  +    + + ++
Sbjct: 139 IMRKVIIPQAMRIAIPPMSNVFLDLIKGTSLAAMITVPEIFQQAKIVGGREFDYMTMYIL 198

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
              IY ++  +  +F N L  + +L
Sbjct: 199 VALIYWAICSVFTIFQNYLEKRTSL 223



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   MI  TI+G L+   R+S +K+V+ I R Y+   R  P LV +F L
Sbjct: 22  ILKGLGYTLGISMVSMIFGTILGFLLAIMRMSTSKIVSMIARTYISFMRGTPTLVFLFIL 81

Query: 149 Y 149
           Y
Sbjct: 82  Y 82


>gi|149375978|ref|ZP_01893744.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
 gi|149359615|gb|EDM48073.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
          Length = 223

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 29/205 (14%)

Query: 193 SFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            FVLGI+  L +       R     + +  +  P+L    F+ +GLP LV          
Sbjct: 37  GFVLGIIFGLLSINKKWFLRWPATAYIEIFRGTPILVQVLFIFYGLPDLV---------- 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G  + P   +   A++  + A+I+E+VR G+ ++ +GQ EA ++LGL+
Sbjct: 87  ------------GGPIDP-LTAGIAAIALNSGAYISEVVRGGVQSIDKGQTEAGLSLGLS 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA R +IPPL +Q +  +K++SL   +G  +LV  G   I  T  A E+
Sbjct: 134 RSQTFWSVVWPQAFRRMIPPLGNQAIVSIKDTSLFSVIGVGELVRQGQVYIANTFTAFEV 193

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             +   +YL++++ ++L +  +  +
Sbjct: 194 YFVVAIMYLAITLSLSLVLRLIERR 218


>gi|89098934|ref|ZP_01171814.1| amino acid ABC transproter, permease [Bacillus sp. NRRL B-14911]
 gi|89086338|gb|EAR65459.1| amino acid ABC transproter, permease [Bacillus sp. NRRL B-14911]
          Length = 215

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 81/132 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+++ + L+ +  A+IAEI R  + ++ +GQMEA  +LG++   A R ++LPQA+R  +
Sbjct: 84  QFLAVVLGLAFHNGAYIAEIFRGSIQSIEKGQMEAGRSLGMSAGLAMRRIILPQAVRRAL 143

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSLA  +G  +L +V  T  +     +  +LI    YL L ++ +  
Sbjct: 144 PPLGNQFIIALKDSSLASFIGMYELFNVATTYGSNEYDYMSYLLIVAVYYLILVLVFSFL 203

Query: 385 MNRLNAKIALKE 396
           ++ +  ++A+ +
Sbjct: 204 VSIIEKRMAISD 215


>gi|326797353|ref|YP_004315173.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326548117|gb|ADZ93337.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 366

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 79/137 (57%), Gaps = 3/137 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ ++AA++AE++R GL A+P+GQ EAA A+GLT+ ++  LV+LPQA++ +I
Sbjct: 229 KLLRVLIGITLFSAAYMAEVIRGGLQAIPKGQYEAADAMGLTYWQSMCLVILPQALKLVI 288

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL---VSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P + + ++ L K+++L   VG  DL   +       N  G  IE      F+Y  +   +
Sbjct: 289 PGIVNTFIGLFKDTTLVYIVGMFDLLGRIQAANHDANWLGTTIEGYAFAGFVYWIICFGM 348

Query: 382 ALFMNRLNAKIALKEKK 398
           + +   +  K+    K+
Sbjct: 349 SRYSMAVERKLDTGHKR 365


>gi|291521639|emb|CBK79932.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Coprococcus catus GD/7]
          Length = 216

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 82/139 (58%), Gaps = 3/139 (2%)

Query: 256 FIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FI G  ++P +   ++ I  +   AA+ AEI RSG+ A+P GQ EAA  LG +  +    
Sbjct: 75  FIFGMQITPSYRLKAVLIGFALNYAAYFAEIYRSGIAAIPVGQYEAARMLGYSKTQTFAY 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQ ++ IIPP+ ++ + L+K++SLA  +  A++ +V   ++      +  I+  +F 
Sbjct: 135 IVMPQVIKRIIPPVANETITLVKDTSLAFTLAVAEVFTVTKQLVASQSSVVPFIVAGIFY 194

Query: 374 YLSLSIMIALFMNRLNAKI 392
           Y+  ++++A+F + L  K+
Sbjct: 195 YI-FNLIVAVFFDYLEKKM 212


>gi|317047287|ref|YP_004114935.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948904|gb|ADU68379.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 319

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 68/104 (65%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   AA++AEI+R+GL++V  GQ+E   A G++  +A R +++PQAMRSIIPP  +Q 
Sbjct: 168 GLALNEAAYMAEIIRAGLLSVDNGQVETTQAFGMSRTRALRRIIIPQAMRSIIPPTGNQL 227

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++++K +SL   +   DL+     + N+T + I ++++ +  YL
Sbjct: 228 ISMIKATSLVSVIAMGDLLYSVQAVYNRTFEIIPMLMVAVIWYL 271


>gi|196042407|ref|ZP_03109669.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|196026753|gb|EDX65398.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
          Length = 219

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 87  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKAIEGRM 215


>gi|320143581|gb|EFW35361.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
          Length = 467

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 61/80 (76%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 342 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 401

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 402 FVTLIKESSIVSTIGVGEIM 421



 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 316

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 317 VQVFIVF 323


>gi|317486432|ref|ZP_07945259.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316922342|gb|EFV43601.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 312

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 67/125 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y  A++ EIVR G+  VP GQ EA+ ALG +  +  RLV+ PQA+R+I+PPL  Q
Sbjct: 187 LTLGVYEGAYVTEIVRGGIEGVPHGQWEASAALGFSRPQQLRLVIFPQAVRAILPPLVGQ 246

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +   K+S+LA  +   DL      ++  +    E+ +    IYL L ++ A +   L  
Sbjct: 247 VITTFKDSALASLISLPDLTFQALEVMAISRMTFEVWISAGAIYLLLGVLCARYGRWLET 306

Query: 391 KIALK 395
           +   K
Sbjct: 307 RETWK 311


>gi|307299245|ref|ZP_07579046.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915041|gb|EFN45427.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 244

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 26/252 (10%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +++F Y SV +V P    ++   + +FL+          + T  ++ V +  L +++ + 
Sbjct: 17  LLWFSYSSVSAVYPFNWSTLTKYYKLFLDG---------IMTTLQLSVIALALAVIVGI- 66

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A  L+R       +    LY+  F    +P LV+I L Y           + F  GS V+
Sbjct: 67  AVALARDSKVNLFRDAGTLYVWFFR--NMPLLVVILLVY-----------YGF--GSAVN 111

Query: 264 PE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            + F +  I+LS +  A++ EI R+G+ AVP G+ EA  A+GL   +    ++ PQA R 
Sbjct: 112 VDRFWAGVISLSLFEGAYVGEIFRAGIDAVPSGEKEAGEAMGLYRSQIMFSIVFPQAFRI 171

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            IPPL  Q + L+K+SSL   +   DL      +  QT    E  ++    YL ++ +++
Sbjct: 172 SIPPLIGQLVTLIKDSSLVSVIALGDLTMKARQVGTQTLAVFEAYIVLAACYLVMTSLVS 231

Query: 383 LFMNRLNAKIAL 394
           L    L  ++A+
Sbjct: 232 LVGRILERRLAI 243


>gi|258621543|ref|ZP_05716576.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262171611|ref|ZP_06039289.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|258586161|gb|EEW10877.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|261892687|gb|EEY38673.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
          Length = 365

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + 
Sbjct: 235 IGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVSVG---GTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  D++ +G    T  N  G A E      ++ W+F +
Sbjct: 295 FIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCF 346


>gi|134098326|ref|YP_001103987.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133910949|emb|CAM01062.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 212

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 5/110 (4%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IAL+ YT+AF+ E++RSG+  VP GQ EAA ++GL   ++   V+LPQA R++
Sbjct: 80  PFFTAAVIALTVYTSAFVCEVLRSGINTVPVGQAEAARSIGLGFAQSLTNVILPQAFRAV 139

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWM 371
           +PP+ S  + LLKN++  VA GF  +  VG  I  +N+ G+      +W+
Sbjct: 140 VPPMVSVLIALLKNTT--VAAGF-SVNEVGSVIPFLNEEGEPTINAFVWI 186


>gi|315638556|ref|ZP_07893732.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Campylobacter
           upsaliensis JV21]
 gi|315481400|gb|EFU72028.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Campylobacter
           upsaliensis JV21]
          Length = 246

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 82/127 (64%), Gaps = 13/127 (10%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++   R ++LPQA+++I+P L ++
Sbjct: 122 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYQSTMREIILPQALKNILPALANE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFIYLSLSIM---IA 382
           +++L K +S+   VGF  +V +  T+ +++ QA+      II   +  Y+S+ I    + 
Sbjct: 182 FISLFKETSV---VGFISVVDI--TMQSKSLQAVLYNPKPIIFTGLVYYVSVKIFSLGVR 236

Query: 383 LFMNRLN 389
           L   RLN
Sbjct: 237 LLEKRLN 243


>gi|119719814|ref|YP_920309.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermofilum pendens Hrk 5]
 gi|119524934|gb|ABL78306.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermofilum pendens Hrk 5]
          Length = 218

 Score = 79.3 bits (194), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 75/127 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S ++AL   +AA+ AEI RS L ++P  Q+ +A +LG +  +  R V+LPQA+R  IP
Sbjct: 84  FTSSFLALGLNSAAYQAEIFRSALKSIPDVQILSAESLGFSGSQVYRYVILPQALRISIP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++++ ++K SSLA  +G  +L   G  +   T +A+E  L+   IY ++  +I+   
Sbjct: 144 SLVNEFVTVVKESSLASVIGIVELTRRGEYVAAYTYRALESYLVVAAIYFAVCYLISYLS 203

Query: 386 NRLNAKI 392
            R+  KI
Sbjct: 204 RRIEEKI 210


>gi|289642306|ref|ZP_06474454.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           symbiont of Datisca glomerata]
 gi|289507838|gb|EFD28789.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           symbiont of Datisca glomerata]
          Length = 216

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 63/92 (68%), Gaps = 1/92 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ YTAAF+ E VRSG+ AV  GQ EAA ++GLT  ++ RLV+LPQA+R++IPPL +  
Sbjct: 90  GLTVYTAAFVCEAVRSGIGAVETGQAEAARSIGLTFGQSLRLVILPQAIRAVIPPLGNVG 149

Query: 332 LNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQ 362
           + ++KNS++  A G   +L SV  T+    G+
Sbjct: 150 IAMVKNSAIVGAFGVGGELYSVASTLNGARGE 181


>gi|260461490|ref|ZP_05809737.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259032560|gb|EEW33824.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 216

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 24/198 (12%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G+V      R +      T + +P+L +  F+ +GLP +        LH          
Sbjct: 39  VGLVYGPTPLRWAVRIFSDTIRGIPILVLMFFVYYGLPAI-------GLHL--------- 82

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                   P F +   AL+ +  A + E VR  + ++P+GQ EAA+A+GLT R+    V+
Sbjct: 83  --------PSFWAAVFALTLFKTAQVVEYVRGAVGSIPQGQSEAAMAIGLTFRQRLAYVI 134

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQA R  +PP  +   + +K S+L   +G  DL+     +I +T +A+ + ++   IY 
Sbjct: 135 FPQAFRRFLPPWINGVTDAVKGSALVSLLGITDLMQAINQVIGRTYEAMPLYILGALIYF 194

Query: 376 SLSIMIALFMNRLNAKIA 393
           +++  ++L   RL  + +
Sbjct: 195 AVNYALSLASRRLERRFS 212


>gi|116629194|ref|YP_814366.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri ATCC 33323]
 gi|238853887|ref|ZP_04644250.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
 gi|282851027|ref|ZP_06260401.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311111028|ref|ZP_07712425.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus gasseri MV-22]
 gi|116094776|gb|ABJ59928.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus gasseri ATCC 33323]
 gi|238833473|gb|EEQ25747.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
 gi|282557979|gb|EFB63567.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311066182|gb|EFQ46522.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus gasseri MV-22]
          Length = 216

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SF+LG+V         ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFILGLVFGFIRYVKIKYLSAVVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+ IAL  +  A +AEIVRSG+ AV  GQME A + G+T
Sbjct: 83  ------------GIVTNPTVASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+  +IP L SQ+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   +++    L +K
Sbjct: 190 MYVIIAIMYFIVCFSLSMIAKHLQSK 215


>gi|330873261|gb|EGH07410.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 277

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|320533838|ref|ZP_08034423.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320133933|gb|EFW26296.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 321

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 4/130 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+++EIVRSGL +V +GQ EAA ALG++  +  R ++LPQAMR I+P
Sbjct: 154 FVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEAAGALGMSKSQILRRIVLPQAMRVIVP 213

Query: 326 PLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMI 381
           P  ++ +++LK +SL +AV F  DL  V  +  + T Q I ++L   IW  +  S+ ++ 
Sbjct: 214 PTGNETISMLKTTSLVLAVPFTLDLTFVTNSYASLTYQIIPLLLVAAIWYIVITSILMVG 273

Query: 382 ALFMNRLNAK 391
             ++ R   K
Sbjct: 274 QHYIERYYGK 283


>gi|317401659|gb|EFV82284.1| hypothetical protein HMPREF0005_00749 [Achromobacter xylosoxidans
           C54]
          Length = 229

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 73/127 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +  + + AA+  EI+R+G+ ++ RGQ+ A++ALGL H +  R V+LPQA+R+++P
Sbjct: 99  FNSAVVTFTLFEAAYFCEIMRAGIQSIARGQVSASMALGLNHWQGMRYVILPQAIRNMVP 158

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++ + L +++SL   +   D +     I  + G+ +E+ L    +Y  +    +  +
Sbjct: 159 ALLTRVIILFQDTSLVYVLSLTDFLGAAAKIGQRDGRLVELYLFVAVVYFVICFTASRLV 218

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 219 KRLEKRV 225


>gi|50123114|ref|YP_052281.1| amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613640|emb|CAG77091.1| probable amino-acid ABC transporter permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 223

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 21/221 (9%)

Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           FP + M     +F+      F+ VLG++L+L      R         +  LYIS F   G
Sbjct: 12  FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYISLFR--G 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P+LV +   + ++F  P L    F G S +     ++ I  S  T+A++AEI R+GL +
Sbjct: 65  IPSLVQL---FIIYFGLPQL----FPGLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLAS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+G ++L +
Sbjct: 117 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  I  ++ +  E  L+   IY  + ++ A    +L  K+
Sbjct: 177 EGKMIAAESLRFFETFLVVGLIYWMVIVVYAWLQKQLEKKL 217


>gi|37528306|ref|NP_931651.1| hypothetical protein plu4485 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787744|emb|CAE16857.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 233

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 16/206 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVL 251
           +F LGI+L  F   L R +  K   A+   Y+  +LI G P LV L  + Y L      L
Sbjct: 31  TFTLGIILG-FIVALIRLYGPKPLIAVAKFYV--WLIRGTPLLVQLFLIFYALPSVGITL 87

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G F             S  I  +    A+ +EI+R+ L++VP+GQ EAA ++G++  ++ 
Sbjct: 88  GAFT------------SAVIGFTLNIGAYTSEIIRATLLSVPKGQWEAAYSIGMSWTQSL 135

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA R  IPPL++ +++L+K++SLA  +   +L      I   T Q + +     
Sbjct: 136 RRIILPQAARIAIPPLSNTFISLVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAA 195

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            +YL +S +++    RL  K + K  
Sbjct: 196 ILYLIISSVLSSLQTRLEKKFSQKSD 221


>gi|228987345|ref|ZP_04147465.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228772317|gb|EEM20763.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 222

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 90  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 150 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 209

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 210 VGKAIEGRM 218


>gi|24378751|ref|NP_720706.1| putative amino acid ABC transporter, permease protein, glutamine
           transport system [Streptococcus mutans UA159]
 gi|24376619|gb|AAN58012.1|AE014873_8 putative amino acid ABC transporter, permease protein, glutamine
           transport system [Streptococcus mutans UA159]
          Length = 517

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 70/120 (58%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG THR+  R ++LPQ +R+I+P   ++++
Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHRQTMRKIVLPQVVRNILPATGNEFV 444

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  K+
Sbjct: 445 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFFIIAVIYFILTFTVTRILRLVERKM 504


>gi|320011626|gb|ADW06476.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 288

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 16/198 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + V  F LG +L++   RLS     +  +A+   YI  +L    P LV +   + +    
Sbjct: 87  VMVLGFALGTLLAVL--RLS---GNRVLQAVSWGYI--WLFRSTPILVQLLFWFNIGALY 139

Query: 249 P-VLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P +LG    N +G  TV+       I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL
Sbjct: 140 PQILGVSTVNLLGPVTVA------VIGLTLHEAAYAAEVVRGGILSVERGQLEAAQSLGL 193

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  R ++LPQAMRSI+PP  +  +  LK +S+   +   DL+     + ++T + I 
Sbjct: 194 GPWRRLRRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYEVIP 253

Query: 366 IILIWMFIYLSLSIMIAL 383
           ++L+    Y++++ +++L
Sbjct: 254 LLLVATLWYVAVTSLLSL 271


>gi|257070102|ref|YP_003156357.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560920|gb|ACU86767.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 277

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 18/211 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   V +F  G++L+L   R+SR    +  KA+ + +I  F   G+P L+++   
Sbjct: 78  TLKVTALAAVVAFPFGLLLAL--ARMSRF---RLLKAVAVTWIEFFR--GIPMLLVV--- 127

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y      P  G           P F  L + +   ++A  AE+ R+G+ AV +GQ EAA 
Sbjct: 128 YAFLLALPAFG--------VTFPRFWMLVVPMILVSSAATAEVFRAGIKAVDKGQHEAAD 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+GL+ R +   V+LPQA+R ++P L    + LLK+S+L   V + +L   G T+++ T 
Sbjct: 180 AIGLSRRDSLIYVVLPQAVRLVLPSLILALVTLLKDSTLGYVVSYNELQFQGKTLVSITR 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++  L+   IY+ +++M+      L+A++
Sbjct: 240 YLVQTYLVVSVIYIVINLMLTRVALSLDARM 270


>gi|229013364|ref|ZP_04170504.1| Arginine transport system permease protein artQ [Bacillus mycoides
           DSM 2048]
 gi|229134968|ref|ZP_04263774.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST196]
 gi|228648470|gb|EEL04499.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST196]
 gi|228747957|gb|EEL97822.1| Arginine transport system permease protein artQ [Bacillus mycoides
           DSM 2048]
          Length = 225

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 93  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYSKMMRNIIFPQALKNI 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYILVIILTL 212

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 213 VGKAIEGRM 221


>gi|227879036|ref|ZP_03996929.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844250|ref|ZP_05549736.1| ABC amino acid transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256849349|ref|ZP_05554782.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|262047629|ref|ZP_06020583.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|227861370|gb|EEJ68996.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613328|gb|EEU18531.1| ABC amino acid transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256714125|gb|EEU29113.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|260572029|gb|EEX28595.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
          Length = 537

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 73/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 450

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N
Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E  +     T+   Y   I+ G   T  LA  G I    IG LVG           
Sbjct: 280 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTR 339

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+     +V W+  VYVE+FR  P +V    +Y
Sbjct: 340 GKRWTLNVVKWLLSVYVEIFRGTPMMVQAAVIY 372


>gi|218284064|ref|ZP_03489892.1| hypothetical protein EUBIFOR_02495 [Eubacterium biforme DSM 3989]
 gi|218215386|gb|EEC88924.1| hypothetical protein EUBIFOR_02495 [Eubacterium biforme DSM 3989]
          Length = 227

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  + A+  E++RSG+  V +GQ EA   LGL++ K  +LV+LPQA + ++PPL S+
Sbjct: 102 IALSINSGAYQTELLRSGINGVDKGQWEACETLGLSNWKTMKLVILPQAFKRVVPPLISE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+SSL   +G  +L+     I  +    +   ++    YL ++ +++   N++  
Sbjct: 162 FITLIKDSSLISCIGAVELLKGAQVIGAEYYDVMSPYMLAAIFYLIMTCIVSCIGNKVEK 221

Query: 391 KIALKE 396
           ++A+ +
Sbjct: 222 RLAVSD 227


>gi|118479346|ref|YP_896497.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|228947870|ref|ZP_04110157.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|118418571|gb|ABK86990.1| L-arginine ABC transporter membrane protein [Bacillus thuringiensis
           str. Al Hakam]
 gi|228811857|gb|EEM58191.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 225

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 93  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 212

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 213 VGKAIEGRM 221


>gi|152984787|ref|YP_001351211.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959945|gb|ABR81970.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 230

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 15/190 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L + L L   R SRH++ +   ALP  YI  F   G P L+      QL      L QF 
Sbjct: 33  LALALPLGIARASRHWYVR---ALPYAYI--FFFRGTPLLL------QLFIVYYGLAQFE 81

Query: 256 FIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +  S   P     Y    + ++ +TAA+IAEI+R  + +VP G++EAA ALG++ R+A 
Sbjct: 82  EVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEAARALGMSRRQAL 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LP+A+R  +P  +++ + +LK S++   V   D++ +  TII +T +++    +  
Sbjct: 142 WHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTLFDIMGMARTIIARTYESMLFFCLAG 201

Query: 372 FIYLSLSIMI 381
            +YL ++I++
Sbjct: 202 ALYLVITIVL 211


>gi|30264228|ref|NP_846605.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47529671|ref|YP_021020.1| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47568216|ref|ZP_00238920.1| MW1799 [Bacillus cereus G9241]
 gi|49187056|ref|YP_030308.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|49480913|ref|YP_038216.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52141345|ref|YP_085484.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|65321542|ref|ZP_00394501.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
 gi|190565774|ref|ZP_03018693.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196034913|ref|ZP_03102320.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|196047222|ref|ZP_03114438.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218905289|ref|YP_002453123.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|225866135|ref|YP_002751513.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|227816929|ref|YP_002816938.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|229163089|ref|ZP_04291045.1| Arginine transport system permease protein artQ [Bacillus cereus
           R309803]
 gi|229603243|ref|YP_002868448.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|254683918|ref|ZP_05147778.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. CNEVA-9066]
 gi|254721753|ref|ZP_05183542.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. A1055]
 gi|254736266|ref|ZP_05193972.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. Western North America USA6153]
 gi|254744155|ref|ZP_05201838.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. Kruger B]
 gi|254754062|ref|ZP_05206097.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. Vollum]
 gi|254758245|ref|ZP_05210272.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. Australia 94]
 gi|301055646|ref|YP_003793857.1| amino acid ABC transporter permease [Bacillus anthracis CI]
 gi|30258873|gb|AAP28091.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47504819|gb|AAT33495.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|47555206|gb|EAL13553.1| MW1799 [Bacillus cereus G9241]
 gi|49180983|gb|AAT56359.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|49332469|gb|AAT63115.1| amino acid ABC transporter, permease [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51974814|gb|AAU16364.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|190562693|gb|EDV16659.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992452|gb|EDX56413.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|196021971|gb|EDX60662.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218537877|gb|ACK90275.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|225787572|gb|ACO27789.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|227002630|gb|ACP12373.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228620495|gb|EEK77365.1| Arginine transport system permease protein artQ [Bacillus cereus
           R309803]
 gi|229267651|gb|ACQ49288.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|300377815|gb|ADK06719.1| amino acid ABC transporter, permease [Bacillus cereus biovar
           anthracis str. CI]
          Length = 219

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 87  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKAIEGRM 215


>gi|299535498|ref|ZP_07048819.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298728698|gb|EFI69252.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 237

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 21/193 (10%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLV-----LIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           +F+    +  P++     + FGLP LV     L+ LK Q                S   P
Sbjct: 56  NFYVSFFRGTPIIMHIMLVYFGLPMLVDSVANLLHLKIQ----------------SNSIP 99

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
               + +AL+    A+ +EI+RSG++AVP+GQ+EAA A+GLT  +A R  +LPQA    I
Sbjct: 100 ILFFVILALTLSAGAYASEIIRSGILAVPKGQLEAAYAIGLTFPQAMRRYILPQAFGQSI 159

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P LT+ ++  L  +SLA  +   +L  V   I +   + +E  +    IY  +SI++   
Sbjct: 160 PNLTNVFIGFLHATSLAFFLSIKELTGVANIIASMNLKFLESFIAVGLIYWGISIIVEWV 219

Query: 385 MNRLNAKIALKEK 397
            +R+  ++    K
Sbjct: 220 SHRIEKRVTAYSK 232


>gi|253735261|ref|ZP_04869426.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253726668|gb|EES95397.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 485

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 61/80 (76%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 420 FVTLIKESSIVSTIGVGEIM 439



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|257069403|ref|YP_003155658.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560221|gb|ACU86068.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 297

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 64/86 (74%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + ++ I L+ Y  A IAE++RSG+ ++P+GQ EAA A+G+T+ ++ R+V +PQA+ +++P
Sbjct: 146 YFAVIIGLTVYNGAVIAELIRSGVRSLPKGQREAAAAIGMTNNQSLRIVEVPQALTAMLP 205

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            L SQ++ +LK+S+L   +GF +L+ 
Sbjct: 206 SLLSQFVVILKDSALGFLIGFYELLQ 231


>gi|229061835|ref|ZP_04199166.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH603]
 gi|228717444|gb|EEL69111.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH603]
          Length = 219

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 87  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYSKMMRNIIFPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYILVIILTL 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKAIEGRM 215


>gi|302189137|ref|ZP_07265810.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
          Length = 277

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAAMALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|317047795|ref|YP_004115443.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949412|gb|ADU68887.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 291

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 231 GLPTLVLIALKYQLHFDKP-----VLGQFNFIGGST---VSPEFMSLYIALSCYTAAFIA 282
           G P LV +   Y L    P     + G F    GST   ++P   +  + L    +A++A
Sbjct: 118 GTPVLVQLIFWYNLAALYPQVSLGIPGLFTLWSGSTNDLITP-LAAAILGLGLNESAYMA 176

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ +V  GQ EAA ALG+T  +  + V+LPQA+  IIPP  +Q + +LK +SL  
Sbjct: 177 EIIRAGISSVDDGQQEAARALGMTRGQYLKRVILPQAIPFIIPPTGNQVIGMLKTTSLVS 236

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  +DL+     I ++T + I ++++    YL+ + +++L   R+ 
Sbjct: 237 VISLSDLLYSAQAIYSRTYENIPLLIVACIWYLAATTVLSLVQARVE 283



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 35/66 (53%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL+G   TFWL    M+ A ++  L+   RL++N L+    R ++  FR  P LV 
Sbjct: 65  FSPTILLGLWTTFWLTLVIMVLAIVLSILLAVMRLASNPLLVGFSRGWIWFFRGTPVLVQ 124

Query: 145 IFFLYK 150
           + F Y 
Sbjct: 125 LIFWYN 130


>gi|290581241|ref|YP_003485633.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254998140|dbj|BAH88741.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 517

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 70/120 (58%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG THR+  R ++LPQ +R+I+P   ++++
Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHRQTMRKIVLPQVVRNILPATGNEFV 444

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  K+
Sbjct: 445 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFFIIAVIYFILTFTVTRILRLVERKM 504


>gi|213967200|ref|ZP_03395349.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301381064|ref|ZP_07229482.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302061561|ref|ZP_07253102.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|213928042|gb|EEB61588.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331018098|gb|EGH98154.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 277

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|165871415|ref|ZP_02216063.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167634127|ref|ZP_02392449.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|167640079|ref|ZP_02398346.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|170688352|ref|ZP_02879561.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|170708925|ref|ZP_02899358.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|177653629|ref|ZP_02935768.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190567465|ref|ZP_03020378.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227813034|ref|YP_002813043.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|229603364|ref|YP_002864981.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
 gi|254686755|ref|ZP_05150613.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724831|ref|ZP_05186614.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           A1055]
 gi|254739022|ref|ZP_05196724.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Western North America USA6153]
 gi|254740746|ref|ZP_05198436.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Kruger B]
 gi|254756134|ref|ZP_05208163.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Vollum]
 gi|254761952|ref|ZP_05213801.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Australia 94]
 gi|164712899|gb|EDR18428.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167511890|gb|EDR87269.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|167530441|gb|EDR93156.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|170126158|gb|EDS95052.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|170667684|gb|EDT18438.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|172081209|gb|EDT66284.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190561252|gb|EDV15224.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227002430|gb|ACP12173.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|229267772|gb|ACQ49409.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
          Length = 230

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG A+L   G
Sbjct: 112 RGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++    +N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 214


>gi|71064875|ref|YP_263602.1| ABC basic amino acid transporter, inner membrane subunit
           [Psychrobacter arcticus 273-4]
 gi|71037860|gb|AAZ18168.1| ABC basic amino acid transporter, inner membrane subunit
           [Psychrobacter arcticus 273-4]
          Length = 241

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 22/213 (10%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           ++ +FS V+G+   L     RLS+++  +    LP LYI  F   G P LV I L Y   
Sbjct: 24  QLVIFSGVIGLFFGLVLALLRLSKNWMVQI---LPFLYI--FFFRGTPLLVQIFLIYY-- 76

Query: 246 FDKPVLGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                LGQF     +F+    +S  +    IA +  T+A++AEI+R  +  +P G++EAA
Sbjct: 77  ----GLGQFEAVRESFLWEPVLSQAYWCAIIAFTLNTSAYLAEIIRGAIQNIPVGELEAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+G++  +    + LP+A   +IP  +++ + +LK S+LA  +   D+  V  TI  +T
Sbjct: 133 DAIGMSKWQKLTRITLPRAFGIVIPVYSNEVIFMLKGSALASTIALMDITGVARTISART 192

Query: 361 GQAIEIILIWMFIYLSLSIMI----ALFMNRLN 389
              +E+      +YL LS +I     +F  R+N
Sbjct: 193 YTLMELFFAAGIVYLLLSWVILFSFRMFEKRMN 225


>gi|227890382|ref|ZP_04008187.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|268319112|ref|YP_003292768.1| hypothetical protein FI9785_623 [Lactobacillus johnsonii FI9785]
 gi|227849196|gb|EEJ59282.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|262397487|emb|CAX66501.1| unnamed protein product [Lactobacillus johnsonii FI9785]
          Length = 216

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 86/173 (49%), Gaps = 30/173 (17%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFVLG+V         ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVLGLVFGFIRYVKIKYLSAIVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+ IAL  +  A +AEIVRSG+ AV  GQME A + G+T
Sbjct: 83  ------------GIITNPTIASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           + +A   V++PQA+  +IP L SQ+++L+K++SLA  +   +L+     I +Q
Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQ 182


>gi|329666943|gb|AEB92891.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii DPC 6026]
          Length = 216

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 34/205 (16%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFVLG+V         ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVLGLVFGFIRYVKIKYLSAIVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+ IAL  +  A +AEIVRSG+ AV  GQME A + G+T
Sbjct: 83  ------------GIITNPTVASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A   V++PQA+  +IP L SQ+++L+K++SLA  +   +L+     I +Q       
Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQNTTY--- 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            LI M++ +++   I  F   + AK
Sbjct: 187 -LIPMYVIIAIMYFIVCFSLSMVAK 210


>gi|293608328|ref|ZP_06690631.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828901|gb|EFF87263.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325121938|gb|ADY81461.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 225

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F   +   P F S+ +  + + AAF +EIVRSG+ ++ +GQ+ A  ALG T+ ++ R 
Sbjct: 82  FEFQSDTYWGPLFSSV-VTFAIFEAAFFSEIVRSGIQSISKGQVHAGYALGFTYGQSMRY 140

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--IILIWM 371
           V+LPQA R+++P L +Q + L ++ SL   +   D +    T+ N  G   +    LI  
Sbjct: 141 VVLPQAFRNMLPVLLTQTIILFQDISLVYVISAPDFLGRADTLANTYGPETKATFYLIVA 200

Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394
            +Y   S +++  + RL  KIA+
Sbjct: 201 VVYFCSSFVLSHLVKRLQQKIAI 223



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS+N + +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSSNAIASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LY 149
            Y
Sbjct: 74  FY 75


>gi|229140887|ref|ZP_04269432.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST26]
 gi|229198282|ref|ZP_04324989.1| Arginine transport system permease protein artQ [Bacillus cereus
           m1293]
 gi|228585161|gb|EEK43272.1| Arginine transport system permease protein artQ [Bacillus cereus
           m1293]
 gi|228642677|gb|EEK98963.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST26]
          Length = 222

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 90  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 150 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 209

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 210 VGKAIEGRM 218


>gi|239821010|ref|YP_002948195.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805863|gb|ACS22929.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 233

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 70/111 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    AA+ +E +RSGL ++P GQ EAA ALG  +  + R V+LPQA+R+ +P L + 
Sbjct: 106 VALGLCQAAYFSEDMRSGLRSIPPGQAEAARALGHGYIGSMRHVMLPQAIRNAVPALVNH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L KNSSLA+A+G A+L      I +Q+ +  E   +   +YL  S++I
Sbjct: 166 SVSLFKNSSLAMAIGVAELTHAVKEIESQSFRTFEAYSMATVLYLVCSLLI 216


>gi|254506010|ref|ZP_05118155.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219551233|gb|EED28213.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 303

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 80/141 (56%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A++AEIVRSGL +V +GQ EAA +L L+     R V+ P
Sbjct: 163 GPAALWENLLSGVLCIGILSSAYVAEIVRSGLASVEKGQWEAADSLSLSTWVKYRYVIAP 222

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   ++  VG  + N +G   EI LI    YL++
Sbjct: 223 QVLVTITPALAGQAISLIKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGLTYLTI 282

Query: 378 SIMIALFMNRLNAKIALKEKK 398
            + +++   +L + I   ++K
Sbjct: 283 CLALSMLFKKLESHILRHQRK 303



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 30/51 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           G V T  L+  G + A  +GTL+G GR S   L+     +++++ RNIPPL
Sbjct: 73  GLVATLRLSIWGGVLAFTLGTLLGIGRQSRFTLIRQPINIFIQLVRNIPPL 123


>gi|156972775|ref|YP_001443682.1| ABC amino acid transporter permease component [Vibrio harveyi ATCC
           BAA-1116]
 gi|156524369|gb|ABU69455.1| hypothetical protein VIBHAR_00440 [Vibrio harveyi ATCC BAA-1116]
          Length = 223

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+      VFS +L ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F FI G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQI--FPFIVGIDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|91977032|ref|YP_569691.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           BisB5]
 gi|91683488|gb|ABE39790.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB5]
          Length = 502

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      + + I ++ +  A+ AE+VR GL A+PRGQ EAA ALGL++ K T L++
Sbjct: 355 FLPGNFTIDGLLRVLIGIALFAGAYNAEVVRGGLNAIPRGQGEAASALGLSYAKTTGLIV 414

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA+R +IP L + ++ L K++SL   V   DL+ 
Sbjct: 415 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 450


>gi|229031799|ref|ZP_04187788.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1271]
 gi|228729545|gb|EEL80533.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1271]
          Length = 197

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 29/206 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LG +L+L       A  ++  F+    +  PL+     + FG+P ++     Y++  
Sbjct: 11  GFILGTLLALCKIARIRALNIAADFYTSIFRGTPLVLQLMIIYFGVPQII----GYEI-- 64

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P F++  +A S  + A+++E++R+G+ AV  GQ EAA+ALG+ 
Sbjct: 65  -----------------PAFVAAVLAFSLNSGAYMSEVIRAGIQAVDNGQTEAAMALGIP 107

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T + +E 
Sbjct: 108 YGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEP 167

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L    IY  L I++ L    +  ++
Sbjct: 168 LLFVGLIYYMLVIILTLVGKAIEGRM 193


>gi|308070241|ref|YP_003871846.1| Probable amino-acid ABC transporter permease protein yckJ
           [Paenibacillus polymyxa E681]
 gi|305859520|gb|ADM71308.1| Probable amino-acid ABC transporter permease protein yckJ
           [Paenibacillus polymyxa E681]
          Length = 222

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 107/201 (53%), Gaps = 14/201 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+VL+L  T L+R    +  K +   Y+  ++I G P LV +   Y + +  P +G
Sbjct: 31  SFALGLVLALI-TALARLSKWRILKLIFGFYV--WVIRGTPLLVQL---YIIFYGLPSVG 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                   T+ P F++  I  +    A+ +EI+R+ +I++  GQ EA  +LG+T  +  R
Sbjct: 85  -------ITLDP-FIASVIGFTLSVGAYSSEIIRAAIISIQEGQWEAGYSLGMTRWQVLR 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA R  +PPL + +++L+K++SLA  + + ++      I+  T + + +      
Sbjct: 137 RIVLPQASRVSVPPLANSFISLVKDTSLAATITYVEMFRTANQIVATTYEPLLVYTEAGV 196

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
           IYL  S ++ +  N L  ++ 
Sbjct: 197 IYLLFSTILTVLQNYLEKRLG 217


>gi|256829242|ref|YP_003157970.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578418|gb|ACU89554.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 268

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 24/205 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFDK 248
           + S VLG++  L   RLSR+      K L L+  ST++  I G+P LV      QL +  
Sbjct: 77  MLSLVLGLITGL--GRLSRN------KVLNLI-ASTYVEVIRGIPLLV------QLFYIY 121

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             LG+  F     + P   ++     CY  A++ E+ R+G+ ++ +GQ EAA +LG +  
Sbjct: 122 YALGRLEFF--KDLPPMAAAVTAMGICY-GAYMGEVFRAGIDSIDKGQAEAARSLGFSRA 178

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--- 365
           +    V+LPQA R+I+PP+ ++++ LLK+SSL   +  +DL+  G    +++    E   
Sbjct: 179 QTMMYVILPQAWRTILPPVGNEFIALLKDSSLVSILAVSDLLRRGREFASESFMYFEAYT 238

Query: 366 -IILIWMFIYLSLSIMIALFMNRLN 389
            + L+++ I L LS  ++    RLN
Sbjct: 239 MVALVYLVITLFLSKAVSKMEQRLN 263



 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G V TF +    ++ + ++G + G GRLS NK++  I   YVEV R IP LV +F++Y
Sbjct: 64  GVVVTFQVTILSIMLSLVLGLITGLGRLSRNKVLNLIASTYVEVIRGIPLLVQLFYIY 121


>gi|228916790|ref|ZP_04080355.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228929200|ref|ZP_04092227.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228935473|ref|ZP_04098291.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229093213|ref|ZP_04224331.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-42]
 gi|229123673|ref|ZP_04252868.1| Arginine transport system permease protein artQ [Bacillus cereus
           95/8201]
 gi|229157734|ref|ZP_04285809.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 4342]
 gi|229186397|ref|ZP_04313561.1| Arginine transport system permease protein artQ [Bacillus cereus
           BGSC 6E1]
 gi|228597024|gb|EEK54680.1| Arginine transport system permease protein artQ [Bacillus cereus
           BGSC 6E1]
 gi|228625691|gb|EEK82443.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 4342]
 gi|228659808|gb|EEL15453.1| Arginine transport system permease protein artQ [Bacillus cereus
           95/8201]
 gi|228690187|gb|EEL43981.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-42]
 gi|228824225|gb|EEM70039.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228830490|gb|EEM76100.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228842977|gb|EEM88060.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 222

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 90  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 150 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 209

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 210 VGKAIEGRM 218


>gi|170720284|ref|YP_001747972.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169758287|gb|ACA71603.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 223

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           VLG +L+L     ++      G      +++PLL + T+    +P      L++    D 
Sbjct: 35  VLGTLLALMRLSSNKLLSNIAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV               F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG+ + 
Sbjct: 91  PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G++ E ++
Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
               +Y  +S   +  + RL  +I
Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRI 221



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 42/69 (60%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G V T  L   G+I   ++GTL+   RLS+NKL++ I   YV  FR+IP L+VI +
Sbjct: 14  ALWEGMVMTLKLMVMGVIGGIVLGTLLALMRLSSNKLLSNIAGAYVNYFRSIPLLLVITW 73

Query: 148 LYKSVLSVL 156
            Y +V  VL
Sbjct: 74  FYLAVPFVL 82


>gi|317486285|ref|ZP_07945117.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316922455|gb|EFV43709.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 233

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 23/181 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    FL FGLP    +AL                  G  + P+   + IA+   
Sbjct: 65  RGTPLIVQVMFLYFGLP----LAL------------------GMRIPPDVAGV-IAIGVN 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR  + ++ +GQ EA  + GLT  +    ++ PQA R +IPPLT+Q +  LK
Sbjct: 102 SGAYIAEIVRGAIQSIDKGQTEAGRSTGLTQAQTMLYIIWPQAFRRMIPPLTNQCIISLK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SL V +G  +L   G  II    +A E+ L     YL++++ I+  +     K+ +  
Sbjct: 162 DTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAIFYLAMTLSISAVLRYYERKLMIGR 221

Query: 397 K 397
           +
Sbjct: 222 R 222


>gi|312961373|ref|ZP_07775878.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311285031|gb|EFQ63607.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 220

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 20/207 (9%)

Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           S  +G V+ L      LSRH   +  +    +Y++  ++   P LVLI L Y   F  P 
Sbjct: 31  SIAIGCVIGLLMAFAMLSRH---RALRVFASVYVT--VVRNTPILVLILLIY---FALPS 82

Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           LG + + I      P F+   I LS Y  A++ E+ R+GL+ +P+G  EA +A+GL   +
Sbjct: 83  LGIRLDKI------PSFI---ITLSLYAGAYLTEVFRAGLLNIPKGLREAGLAIGLGEWR 133

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               + +P  +R+++P L++ +++L K++SLA A+   +L      I  ++ + IE  L+
Sbjct: 134 IRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWLV 193

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              +Y++   +IA+ +  L  ++A++ 
Sbjct: 194 TTALYVAACYLIAMLLRYLEQRLAIRR 220


>gi|229826278|ref|ZP_04452347.1| hypothetical protein GCWU000182_01650 [Abiotrophia defectiva ATCC
           49176]
 gi|229789148|gb|EEP25262.1| hypothetical protein GCWU000182_01650 [Abiotrophia defectiva ATCC
           49176]
          Length = 224

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 80/130 (61%), Gaps = 4/130 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+S+ +AL   +AA+++E++RSG+ AV +GQ EAA +LGL  R+    ++LPQA+R I+
Sbjct: 92  DFVSVTVALILNSAAYVSEVIRSGIEAVDKGQTEAARSLGLNKRQTMFKIVLPQAIRYIL 151

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIM 380
           P L ++++ ++K +SLA      DL++    I   T   IE ++I   IY     +LS  
Sbjct: 152 PALGNEFIMMIKETSLASTFFVGDLMTRYQVITGATFLVIEPLIIIGVIYFILTFTLSRG 211

Query: 381 IALFMNRLNA 390
           +A+   R+ A
Sbjct: 212 VAVLERRMKA 221


>gi|261404398|ref|YP_003240639.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|329929701|ref|ZP_08283387.1| putative glutamine ABC transporter, permease protein GlnM
           [Paenibacillus sp. HGF5]
 gi|261280861|gb|ACX62832.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|328935918|gb|EGG32377.1| putative glutamine ABC transporter, permease protein GlnM
           [Paenibacillus sp. HGF5]
          Length = 219

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 80/135 (59%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V P F S  + L  YTAAFIAE +R+G+ AVP GQ EAA + GL++ +  R ++LPQ
Sbjct: 83  GIPVDP-FTSGTLGLMVYTAAFIAEAIRAGIQAVPSGQSEAARSSGLSYIQNMRYIILPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++ ++P + +Q +NL+KNSS+   +   DL+     I   T + I +       YL L+
Sbjct: 142 AVKIVLPAIGNQLINLVKNSSVLGVIAGLDLMYYADLINLSTFKGIPVYTFVALFYLLLT 201

Query: 379 IMIALFMNRLNAKIA 393
           + ++L ++ +  + A
Sbjct: 202 VPLSLAVHYMERRFA 216


>gi|21283528|ref|NP_646616.1| hypothetical protein MW1799 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486677|ref|YP_043898.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57650648|ref|YP_186741.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87161641|ref|YP_494491.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88195682|ref|YP_500488.1| ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221962|ref|YP_001332784.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161510076|ref|YP_001575735.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221142158|ref|ZP_03566651.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253732516|ref|ZP_04866681.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|258452651|ref|ZP_05700650.1| amino acid ABC transporter [Staphylococcus aureus A5948]
 gi|282924191|ref|ZP_06331866.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9765]
 gi|284024905|ref|ZP_06379303.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus 132]
 gi|294850288|ref|ZP_06791023.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9754]
 gi|297207424|ref|ZP_06923861.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300911508|ref|ZP_07128953.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304380538|ref|ZP_07363213.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|21204969|dbj|BAB95664.1| MW1799 [Staphylococcus aureus subsp. aureus MW2]
 gi|49245120|emb|CAG43586.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57284834|gb|AAW36928.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87127615|gb|ABD22129.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87203240|gb|ABD31050.1| ABC transporter, permease protein, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150374762|dbj|BAF68022.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160368885|gb|ABX29856.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723797|gb|EES92526.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257859626|gb|EEV82475.1| amino acid ABC transporter [Staphylococcus aureus A5948]
 gi|269941329|emb|CBI49726.1| putative extracellular glutamine-bindingprotein [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282592986|gb|EFB97988.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9765]
 gi|294822904|gb|EFG39338.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9754]
 gi|296887887|gb|EFH26783.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300887140|gb|EFK82340.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302751667|gb|ADL65844.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340867|gb|EFM06792.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|315196792|gb|EFU27136.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141291|gb|EFW33136.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|329314534|gb|AEB88947.1| Polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329729517|gb|EGG65919.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 485

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 61/80 (76%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 420 FVTLIKESSIVSTIGVGEIM 439



 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|110347318|ref|YP_666135.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110287494|gb|ABG65552.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chelativorans sp. BNC1]
          Length = 232

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 88/166 (53%), Gaps = 16/166 (9%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVSP------------EFMSLYIALSCYTA 278
           P   LIAL  + H + P+L Q  F + G S++ P            EF+   +AL  YTA
Sbjct: 54  PLSWLIALYVEYHRNVPLLVQLLFWYFGISSLFPDGLNDFINQHNTEFIFALLALVLYTA 113

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+++E +RSGL A+ + Q EAA A+G    +     +LPQ  R  +PPL +Q L L K +
Sbjct: 114 AYMSEDMRSGLRAISKTQFEAARAIGFGFVQTMTYAILPQVWRLSLPPLVNQTLILFKGT 173

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL--SLSIMIA 382
           SLA ++G A+L      I + T +  E   +   +YL  SL++M A
Sbjct: 174 SLAASIGVAELTFQARQIESITFRVFESFFVVSLLYLAGSLTLMFA 219


>gi|315283402|ref|ZP_07871606.1| L-cystine transport system permease protein TcyL [Listeria marthii
           FSL S4-120]
 gi|313612951|gb|EFR86889.1| L-cystine transport system permease protein TcyL [Listeria marthii
           FSL S4-120]
          Length = 238

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 24/193 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +          +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVILSL-----PRIYKIPVLNQFARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL  
Sbjct: 83  LSSVFGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNG 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIM 380
                +Y+SLSI+
Sbjct: 197 -----VYISLSII 204


>gi|302333524|gb|ADL23717.1| amino acid ABC transporter protein [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 485

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 61/80 (76%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 420 FVTLIKESSIVSTIGVGEIM 439



 Score = 44.3 bits (103), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|42820805|emb|CAE02641.1| YckJ protein [Bacillus amyloliquefaciens FZB42]
          Length = 168

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 8/139 (5%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+ P F S  IA S    A+ +EI+R+ + +VP+GQ EA   +G+T+RK    V+LPQA 
Sbjct: 31  TLDP-FPSAVIAFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKTLFRVILPQAF 89

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI------WMFIY 374
           R  IPPL++ +++L+K++SLA  +  A+L      I  Q    I +I I      W+  +
Sbjct: 90  RVSIPPLSNTFISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIEAAFIYWIICF 149

Query: 375 LSLSIMIALFMNRLNAKIA 393
           L LSI+  +   RL+  +A
Sbjct: 150 L-LSIVQHVIERRLDRYVA 167


>gi|325519635|gb|EGC98978.1| hypothetical protein B1M_38906 [Burkholderia sp. TJI49]
          Length = 220

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 22/215 (10%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           ++ + + V G+V+ L A   RLSRH    +  G      YI  +LI   P LV +   + 
Sbjct: 23  QLTLLATVAGLVIGLAAALGRLSRHRVLRDAMGA-----YI--WLIRSTPLLVQL---FI 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F  P   QF    G  +SP F S  I L+    A+ AE +R+G++A+P GQ+EA+ +L
Sbjct: 73  IYFGLP---QF----GIELSP-FTSGVIGLALNVGAYNAETIRAGILAIPHGQIEASRSL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G    +  RLV+LPQA++ I+PPL +  + L K++SL   +  A+L      ++  T + 
Sbjct: 125 GFGAARTMRLVVLPQALKLIVPPLGNNLIILTKDTSLVSTITLAELFMRTQQLVGATFKP 184

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E+      IY  L+   ++ + +   ++ LK  +
Sbjct: 185 FELYFACAMIYALLTTGTSVLLRQFEQRLILKGGR 219


>gi|293381104|ref|ZP_06627121.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|290922316|gb|EFD99301.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
          Length = 526

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 73/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++
Sbjct: 380 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNE 439

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N
Sbjct: 440 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 495



 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E  +     T+   Y   I+ G   T  LA  G I    IG LVG           
Sbjct: 269 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTR 328

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+     +V W+  VYVE+FR  P +V    +Y
Sbjct: 329 GKRWTLNVVKWLLSVYVEIFRGTPMMVQAAVIY 361


>gi|227431441|ref|ZP_03913490.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352807|gb|EEJ42984.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 219

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 35/209 (16%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           + SF+ G ++ +       +F +  G      + LPLL I  F+ F LP       K  +
Sbjct: 34  ILSFIAGSIIGIVQFERIPYFSKFVGTINNIIRNLPLLLIIFFVYFVLP-------KLGI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H                  P F +  +A+S + ++ +AEIVR GL ++  GQ E A A G
Sbjct: 87  HL-----------------PIFWATVVAMSTFESSMLAEIVRGGLESIDEGQFEGARANG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-- 362
           LT+ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  A++   G  I  Q     
Sbjct: 130 LTNIQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEMTYRGQIIYAQNSTYI 189

Query: 363 ---AIEIILIWMFIYLSLSIMIALFMNRL 388
               I I L++  +   LS++   F  RL
Sbjct: 190 IPVLIAITLVYFLLNYGLSLIAKWFDRRL 218


>gi|322381529|ref|ZP_08055508.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154536|gb|EFX46833.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 202

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 20/170 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+   A   V SF++G +L +      R+        L LL++   +I  LP L++I  
Sbjct: 6   ITLWMAAVSIVLSFIIGSILGIL-----RYTRIPVVSQLVLLWVE--MIRNLPLLLII-- 56

Query: 241 KYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            + + F  P +G +F+ I          S  IAL+ + +A I+EI+R GL ++ +GQ+EA
Sbjct: 57  -FFVRFALPEVGIKFDVIT---------SAIIALTVFESAMISEIIRGGLNSIEKGQIEA 106

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A + GLT+ +    ++ PQA++ ++PP  SQ+++LLK++SLAV +   DL
Sbjct: 107 ARSSGLTYIQTLWHIIFPQAVKRMVPPTVSQFISLLKDTSLAVIISAPDL 156



 Score = 39.7 bits (91), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 38/57 (66%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           GF  T W+A   ++ + IIG+++G  R +   +V+ +  ++VE+ RN+P L++IFF+
Sbjct: 3   GFGITLWMAAVSIVLSFIIGSILGILRYTRIPVVSQLVLLWVEMIRNLPLLLIIFFV 59


>gi|319441562|ref|ZP_07990718.1| glutamate ABC transport system, permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 313

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 112/216 (51%), Gaps = 21/216 (9%)

Query: 179 PTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           P L     A +   + + ++G VL +   RLS H   ++ + +  + +  F    +P LV
Sbjct: 68  PGLWATVKAAVLSIILALIVGAVLGI--GRLSTH---RSIRWICSIIVEVFR--SIPVLV 120

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y       + G++     + +   F ++   L+ Y  + IAE +RSG+ ++P+GQ
Sbjct: 121 LMLFAYT------IFGEWGLFPSTQLG--FAAVVFGLTMYNGSVIAETLRSGIESLPKGQ 172

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALGL+  +  R +LLPQA+ +++P + SQ +  LK+S+L   +GF ++V  G   
Sbjct: 173 SEAAYALGLSWGQTMRKILLPQAVAAMMPAIVSQMVIALKDSALGYMIGFVEVVRSG--- 229

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             Q G+    IL  + +  ++ I+I   + RL  +I
Sbjct: 230 -RQLGEYYGSILPSLLVVAAIMIIINFGLTRLAERI 264



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 45/71 (63%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  SS+ T I+ G   T   A   +I A I+G ++G GRLS ++ + WIC + VEVFR+
Sbjct: 56  FTKGSSWTTYIIPGLWATVKAAVLSIILALIVGAVLGIGRLSTHRSIRWICSIIVEVFRS 115

Query: 139 IPPLVVIFFLY 149
           IP LV++ F Y
Sbjct: 116 IPVLVLMLFAY 126


>gi|104780399|ref|YP_606897.1| glutamate-aspartate ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95109386|emb|CAK14086.1| Glutamate-aspartate ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 223

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PLL + T+    +P      L++    D PV               F S  +A   +
Sbjct: 63  RSIPLLLVITWFYLAVP----FVLRWITGEDTPV-------------GAFTSCVVAFMMF 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+  EIVR+G+ ++ +GQM AA ALG+++ +  RL++LPQA R + P L  Q + L +
Sbjct: 106 EAAYFCEIVRAGVQSISKGQMGAAQALGMSYGQCMRLIILPQAFRKMTPLLLQQSIILFQ 165

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL   VG  D ++   +  +  G++ E ++    +Y  +S   +  + RL  +I
Sbjct: 166 DTSLVYTVGLIDFLNSARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRI 221



 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 41/69 (59%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G V T  L   G++    +GT++   RLS+NKL+A I   YV  FR+IP L+VI +
Sbjct: 14  ALWDGMVLTLQLMVMGVVGGIALGTILALMRLSSNKLLANIAGTYVNYFRSIPLLLVITW 73

Query: 148 LYKSVLSVL 156
            Y +V  VL
Sbjct: 74  FYLAVPFVL 82


>gi|49183380|ref|YP_026632.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|49177307|gb|AAT52683.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Sterne]
          Length = 291

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 69  TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 124

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 125 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 172

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG A+L   G
Sbjct: 173 RGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSG 232

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++    +N L  ++  KE
Sbjct: 233 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 275



 Score = 36.6 bits (83), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 68  STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 126

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 127 VQIAILYFGITSVV 140


>gi|51243942|ref|YP_063826.1| glutamine transport system permease protein (GlnP) [Desulfotalea
           psychrophila LSv54]
 gi|50874979|emb|CAG34819.1| related to glutamine transport system permease protein (GlnP)
           [Desulfotalea psychrophila LSv54]
          Length = 299

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 11/154 (7%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L F KP           T++P F S  + L+ +  A+I EIVR+G+ AV RGQ EA+ AL
Sbjct: 151 LFFSKP----------ETITP-FFSGILTLALFQGAYIGEIVRAGIEAVDRGQWEASSAL 199

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT     R V+LPQA+R+++P L ++++N +K SS+   +   +L   G  ++  +   
Sbjct: 200 GLTKWTQLRSVILPQAVRTMLPTLANEFINTIKWSSIVSIISIQELTFQGMQVMASSQAT 259

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E+ LI   +YL + + ++  ++ +  +IA  ++
Sbjct: 260 LEVWLIITSMYLIICLFLSYIVHCIEKRIADPDR 293



 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 15/118 (12%)

Query: 58  SLGIGFLSERAGFEID-----QGIVPY------TSDSSYATAILVGFVNTFWLAFSGMIP 106
           S G+ FL  R  + ++     Q ++PY       +     + +L G   T  L+   MI 
Sbjct: 19  STGLAFLLYRLVWGMNYHWRWQAVLPYIYYINPQTGEGRPSVLLEGLFTTIRLSIWAMIF 78

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY----KSVLSVLPIPD 160
           AT+IG  +G  R S+      +   Y+ + RN PPLV+IF  Y      + ++LP+ D
Sbjct: 79  ATLIGFSMGIMRTSSRLFFRLVGTTYITLIRNTPPLVLIFIFYYFISDQLFALLPLDD 136


>gi|317153460|ref|YP_004121508.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943711|gb|ADU62762.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 273

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 77/128 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IALS +  A+ +EI+R+G+ ++  GQ EAA +LG++     R ++LPQA+R ++P
Sbjct: 142 FWAAIIALSLFEGAYASEILRAGISSIASGQWEAAQSLGMSPYAMYRHIILPQAVRRVLP 201

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTSQ ++L+K+S+L   +   DL   G  I  +T    EI      +YL++++ ++  +
Sbjct: 202 PLTSQAVSLVKDSALVSTIAIMDLTQQGRMIDAETFLTFEIWFTVAAVYLAVTLALSGTV 261

Query: 386 NRLNAKIA 393
             L  + A
Sbjct: 262 RLLERRYA 269


>gi|229019366|ref|ZP_04176190.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1273]
 gi|229025612|ref|ZP_04182019.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1272]
 gi|228735706|gb|EEL86294.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1272]
 gi|228741934|gb|EEL92110.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1273]
          Length = 225

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 93  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYSKMMRNIIFPQALKNI 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 153 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYILVIILTL 212

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 213 VGKAIEGRM 221


>gi|222081206|ref|YP_002540569.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725885|gb|ACM28974.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 235

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 68/111 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA+ +E +RSGL +V  GQMEAA ALG  +  A R V++PQ +R+ +P L + 
Sbjct: 106 IGLGLCQAAYFSEDLRSGLRSVNPGQMEAARALGHGYISAMRFVMIPQGIRNALPALINH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++L +NSSLAVA+G A+L      + N +    E  L+   +YL+ S+MI
Sbjct: 166 SVSLFQNSSLAVAIGVAELTYAVKEVENLSFLTFETYLLATVLYLAFSLMI 216


>gi|86359584|ref|YP_471476.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86283686|gb|ABC92749.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 108/203 (53%), Gaps = 14/203 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G++L L  T ++R F      A+   Y+  ++I G P LV +   + + +  P 
Sbjct: 21  LLSFTFGLILGLI-TAIARLFSPAPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 74

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A
Sbjct: 75  VG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 126

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
               +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T + + + +  
Sbjct: 127 MSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 186

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IYL LS +++    RL  + A
Sbjct: 187 ALIYLVLSSILSQLQVRLERRFA 209


>gi|116671680|ref|YP_832613.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116611789|gb|ABK04513.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 263

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 78/131 (59%), Gaps = 4/131 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+L    AA+IAE +R+GL AVP+GQ+EAA +LG+   +A   +++PQA R ++PPLT++
Sbjct: 133 ISLGMVAAAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVSIVIPQAFRIVLPPLTNE 192

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K+SSL   +G      +L   G   I+  G  +  +L+    YL ++I ++L   
Sbjct: 193 VILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFYLVITIPLSLLAR 252

Query: 387 RLNAKIALKEK 397
           +  ++ A  ++
Sbjct: 253 KFESRSARTKR 263


>gi|302130067|ref|ZP_07256057.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
          Length = 277

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|321312472|ref|YP_004204759.1| sulfur-containing amino acid ABC transporter permease [Bacillus
           subtilis BSn5]
 gi|320018746|gb|ADV93732.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus
           subtilis BSn5]
          Length = 239

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 15/233 (6%)

Query: 171 LNNRGLSFPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +N  G   PTLT  +     I   S + G VL LF   L R ++      L  +YIS F 
Sbjct: 7   MNMIGDFVPTLTAYLPVTLYILTLSLLFGFVLGLFLA-LPRIYNIPIVNQLAKVYISFFR 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA---FIAEIV 285
             G P +V +   + + +  P L     I  S + P     Y A++ Y  +     AEI+
Sbjct: 66  --GTPIMVQL---FIVFYGIPALTGLIGIDTSKMDP----FYAAVATYALSNAAAAAEII 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V +GQ EAA ++GL+  +A R ++LPQA+    P + +  ++ LK++SLA ++G
Sbjct: 117 RAGVGSVDKGQTEAAYSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D+   G T+I  +  ++E+ +    +Y +++++   F      +I   + +
Sbjct: 177 VMDMSGRGQTLITSSNHSLEVYIALSIVYYAVAVLFEWFFRVAEKRIKKNQTR 229


>gi|28210297|ref|NP_781241.1| cystine/glutamine permease protein [Clostridium tetani E88]
 gi|28202733|gb|AAO35178.1| cystine/glutamine permease protein [Clostridium tetani E88]
          Length = 216

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 79/125 (63%), Gaps = 1/125 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  + A++AEI+R G+I+V +GQ EA  ALG ++ +  + ++LPQA+R ++PP  ++
Sbjct: 91  IGLSLNSGAYMAEIIRGGIISVDKGQFEACKALGFSYGQTMKRIILPQAVRVLVPPTGNE 150

Query: 331 YLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ +LK++SL +V  G  +++ V     + T + +E  L+   IYL L+ +  +   ++ 
Sbjct: 151 FITILKDTSLVSVLGGMEEVMRVAQQSYSATFRPLEPFLVAACIYLILTTVFTIVFGKIE 210

Query: 390 AKIAL 394
            K+++
Sbjct: 211 KKVSV 215


>gi|16801504|ref|NP_471772.1| hypothetical protein lin2442 [Listeria innocua Clip11262]
 gi|16414964|emb|CAC97669.1| lin2442 [Listeria innocua Clip11262]
          Length = 238

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 24/193 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +          +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVILSL-----PRIYQIPVLNQFARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL  
Sbjct: 83  LSGVFGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSVGLNG 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 RQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIM 380
                +Y+SLSI+
Sbjct: 197 -----VYISLSII 204


>gi|148546353|ref|YP_001266455.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148510411|gb|ABQ77271.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 223

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 23/204 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           VLG +L+L     S+      G      +++PLL + T+    +P      L++    D 
Sbjct: 35  VLGTILALMRLSSSKLLSNLAGAYVNYFRSIPLLLVITWFYLAVP----FVLRWITGEDT 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV               F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG+ + 
Sbjct: 91  PV-------------GAFTSCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYA 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G++ E ++
Sbjct: 138 QTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARSNGDIIGRSHEFLI 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
               +Y  +S   +  + RL  +I
Sbjct: 198 FAGVVYFLISFSASWLVKRLQKRI 221


>gi|113971389|ref|YP_735182.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           sp. MR-4]
 gi|117919333|ref|YP_868525.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           sp. ANA-3]
 gi|113886073|gb|ABI40125.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sp. MR-4]
 gi|117611665|gb|ABK47119.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sp. ANA-3]
          Length = 226

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 77/123 (62%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     +L++LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++F+  S + M++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|315222036|ref|ZP_07863947.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315189002|gb|EFU22706.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 521

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLTFTV 491


>gi|258545566|ref|ZP_05705800.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
 gi|258519266|gb|EEV88125.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
          Length = 339

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 4/96 (4%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M   I ++ + +A++AE+VR GL A+PRGQ EAA +LGL +    RL++LPQA+ ++IP 
Sbjct: 206 MRALIGVALFASAYMAEVVRGGLQAIPRGQFEAADSLGLGYWAKMRLIILPQALTTVIPG 265

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +T+ ++ L K+++L   +G  D +     I++  GQ
Sbjct: 266 ITNTFVGLFKDTTLVSIIGLYDFLG----IVHSAGQ 297


>gi|110801621|ref|YP_699371.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Clostridium perfringens SM101]
 gi|110682122|gb|ABG85492.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens SM101]
          Length = 502

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF  +LG+++ + A  + R +     K +  +YIS F   G P LV + L   L+F  P 
Sbjct: 309 VFGVILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 361

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 I        F +  I L    +A+IAEI+RS + A+ +GQMEA ++LG+T  +A
Sbjct: 362 ----QVIPSLQNMNAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTRAQA 417

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            + V+LPQA R  IPPL + +++ +K SSLA  +G  +L++
Sbjct: 418 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 458


>gi|167035336|ref|YP_001670567.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166861824|gb|ABZ00232.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 223

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 17/176 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PLL + T+    +P      L++    D PV               F S  +A   +
Sbjct: 63  RSIPLLLVITWFYLAVP----FVLRWITGEDTPV-------------GAFTSCVVAFMMF 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+  EIVR+G+ ++ +GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +
Sbjct: 106 EAAYFCEIVRAGVQSISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQ 165

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL   VG  D ++   +  +  G++ E ++    +Y  +S   +  + RL  +I
Sbjct: 166 DTSLVYTVGLVDFLNSARSNGDIIGRSHEFLIFAGVVYFIISFSASWLVKRLQKRI 221


>gi|325685987|gb|EGD28048.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 500

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 76/131 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+  K  R V+ PQA+++I
Sbjct: 365 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQALKNI 424

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ L K+SSL   +G  +L+   G +   T + +  + I M IY  ++ ++  
Sbjct: 425 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFILTR 484

Query: 384 FMNRLNAKIAL 394
            +N    ++ L
Sbjct: 485 LLNYFERRMNL 495



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 1/106 (0%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            +N   NN +K +L     ++   A            S S YA     G   T  +    
Sbjct: 250 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYAGYFATGLGYTMIITICS 308

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +    ++G +    RLS NKL+  I   Y+E  R  P +V I F+Y
Sbjct: 309 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 354


>gi|296333449|ref|ZP_06875902.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305675045|ref|YP_003866717.1| high affinity arginine ABC transporter permease [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296149647|gb|EFG90543.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305413289|gb|ADM38408.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +   +LGIVLSL      R       F+    +  PL+     + FGLP L    L +Q+
Sbjct: 31  IIGLILGIVLSLCKISTFRPLIWIADFYTSVFRGTPLVLQLMIVYFGLPQL----LGFQI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                               +F +  +ALS  +AA+++EI+R+G+ A+ +GQ EAA+ALG
Sbjct: 87  D-------------------QFWAAVVALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           + + K  + +LLPQA ++I P + ++ + L K S++   +G  D++
Sbjct: 128 VPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDVM 173


>gi|295103474|emb|CBL01018.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 254

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 79/127 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L   + A+++EI+R GL+AV  GQMEA  +LGL +     ++++PQA+R+++P L ++
Sbjct: 128 LTLGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPALGNE 187

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK++SL   +G  +L+     I+N+T  A+  +L    IYL L ++    +++   
Sbjct: 188 FIILLKDTSLITTIGGKELLYAAQGIMNRTYDAMFPLLGVALIYLILVMLFTWLLSKFER 247

Query: 391 KIALKEK 397
           ++A  ++
Sbjct: 248 RLAQSDR 254


>gi|152982686|ref|YP_001351971.1| ABC-type glutamate/aspartate transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|151282763|gb|ABR91173.1| ABC-type glutamate/aspartate transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 228

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 74/127 (58%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S YI    + AA+  EI+R+G+ ++ +GQ+ A  ALGLT+R++ +LV+LPQA R+++P L
Sbjct: 100 SAYITFIMFEAAYFCEIMRAGIQSISKGQVNAGYALGLTYRQSMQLVVLPQAFRNMLPIL 159

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L ++ SL   +   D V     +  +  + +E+ L    +Y  LS  ++  + +
Sbjct: 160 LTQTIVLFQDVSLVSLLNVTDFVGAAVKVAQRDSRVVEMYLFVAIVYFVLSFALSTLVKQ 219

Query: 388 LNAKIAL 394
           L  + A+
Sbjct: 220 LQKRFAI 226



 Score = 43.5 bits (101), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 9/80 (11%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           FEI     PY         +L G   T  L         I GTL+   RLS+NK ++ I 
Sbjct: 6   FEIITRTWPY---------LLAGLQYTLQLTVVAAFGGVIFGTLLAMARLSSNKTLSLIA 56

Query: 130 RVYVEVFRNIPPLVVIFFLY 149
             YV + R+IP L+VIF+ Y
Sbjct: 57  AAYVNLMRSIPLLLVIFWFY 76


>gi|295395634|ref|ZP_06805826.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971450|gb|EFG47333.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 264

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 30/217 (13%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTL-VLIALKYQLH 245
           FVF+ +LG +L+L           K     P  +I+T  I    G+P L V IA      
Sbjct: 69  FVFAMLLGNILALM----------KISSVAPYRWIATAYIEFFRGVPALLVFIAF----G 114

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P     N          ++++ +AL    +A+IAE +R+GL AVP+GQ EAA +LG+
Sbjct: 115 FGIPAAFSINL-------NTYVTVMLALGIVESAYIAETLRAGLQAVPKGQYEAARSLGM 167

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361
           +H +A   +++PQAMR I+PPLT++ + + K+SSL   +G +    +L   G   I    
Sbjct: 168 SHSRAMFTIVVPQAMRIILPPLTNEIIIMTKDSSLIYLLGLSAVQFELALFGKNAIAAPS 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  +++    YL +++ +     +  ++ A KE+K
Sbjct: 228 AGLTPLVVAGACYLVITLPLGWLARKFESRQA-KERK 263


>gi|62179394|ref|YP_215811.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|62127027|gb|AAX64730.1| ABC superfamily (membrane), glutamine high-affinity transporter
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322713865|gb|EFZ05436.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 114/212 (53%), Gaps = 14/212 (6%)

Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            AK+ ++  VLG+   L    A   +R F       + L++I   +I G P +V +   Y
Sbjct: 18  GAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY 75

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +A
Sbjct: 76  ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLA 126

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +
Sbjct: 127 LGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++EI       YL ++++++  + RL  ++ +
Sbjct: 187 SLEIWSAVAVFYLIITLVLSFILRRLERRMKI 218


>gi|158423550|ref|YP_001524842.1| glutamate/aspartate transport system permease protein 2
           [Azorhizobium caulinodans ORS 571]
 gi|158330439|dbj|BAF87924.1| glutamate/aspartate transport system permease protein 2
           [Azorhizobium caulinodans ORS 571]
          Length = 255

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L+ Y +A I E +RSG+ ++PRGQ++AA+ALGLT   A R V+LP+A R +IP
Sbjct: 110 FVPALLCLTFYGSARIGEQMRSGIQSLPRGQLQAALALGLTPVMAYRHVVLPEAFRLMIP 169

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+++ ++K SS+A+ +G  +L      +   +    E        YL ++  I L M
Sbjct: 170 PLTSEFMAIVKYSSVAMTIGLLELTGQARAMQEASFHIFEAFSAATVGYLVINGCIVLAM 229

Query: 386 NRLNAKIAL 394
             L  ++A+
Sbjct: 230 RWLERRLAV 238



 Score = 36.2 bits (82), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 80  TSDS--SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +SD   SY   + +G + T  L  +    A + G+++G  R +   ++  I   YVE+FR
Sbjct: 14  SSDGVHSYLYNLGLGVLWTLGLTGATAAGALVFGSILGVFRTTRAPVLNAIGATYVEIFR 73

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
           NIP LV +F  Y  +  VLP
Sbjct: 74  NIPLLVQMFLWYFVLPEVLP 93


>gi|51596054|ref|YP_070245.1| amino-acid ABC transporter (permease) [Yersinia pseudotuberculosis
           IP 32953]
 gi|153950219|ref|YP_001401242.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|186895160|ref|YP_001872272.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|51589336|emb|CAH20958.1| putative amino-acid ABC transporter (permease) [Yersinia
           pseudotuberculosis IP 32953]
 gi|152961714|gb|ABS49175.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|186698186|gb|ACC88815.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 220

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 77/128 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +A   V+LPQA R+ +PPL + 
Sbjct: 93  IGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   NRL A
Sbjct: 153 FIGLVKDTSLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQNRLEA 212

Query: 391 KIALKEKK 398
            +  ++++
Sbjct: 213 HVNRQDQE 220


>gi|189023947|ref|YP_001934715.1| Tetracycline resistance protein [Brucella abortus S19]
 gi|189019519|gb|ACD72241.1| Tetracycline resistance protein [Brucella abortus S19]
          Length = 289

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 157 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 216

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 217 FIGLFKDTSLVYIIGMFDLLGI 238


>gi|82699627|ref|YP_414201.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|254689009|ref|ZP_05152263.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 6 str. 870]
 gi|254697144|ref|ZP_05158972.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254707028|ref|ZP_05168856.1| binding-protein dependent transport system inner membrane protein
           [Brucella pinnipedialis M163/99/10]
 gi|254730040|ref|ZP_05188618.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 4 str. 292]
 gi|256113278|ref|ZP_05454146.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis bv. 3 str. Ether]
 gi|256257259|ref|ZP_05462795.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 9 str. C68]
 gi|256264231|ref|ZP_05466763.1| amino acid ABC transporter permease [Brucella melitensis bv. 2 str.
           63/9]
 gi|260545547|ref|ZP_05821288.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260754502|ref|ZP_05866850.1| ABC-type arginine transport system, permease component [Brucella
           abortus bv. 6 str. 870]
 gi|260757723|ref|ZP_05870071.1| ABC transporter permease [Brucella abortus bv. 4 str. 292]
 gi|260761548|ref|ZP_05873891.1| ABC transporter permease [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883531|ref|ZP_05895145.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|265994690|ref|ZP_06107247.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|82615728|emb|CAJ10724.1| Binding-protein-dependent transport systems inner membrane
           component:Tetracycline resistance protein [Brucella
           melitensis biovar Abortus 2308]
 gi|260096954|gb|EEW80829.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260668041|gb|EEX54981.1| ABC transporter permease [Brucella abortus bv. 4 str. 292]
 gi|260671980|gb|EEX58801.1| ABC transporter permease [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674610|gb|EEX61431.1| ABC-type arginine transport system, permease component [Brucella
           abortus bv. 6 str. 870]
 gi|260873059|gb|EEX80128.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|262765803|gb|EEZ11592.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|263094477|gb|EEZ18299.1| amino acid ABC transporter permease [Brucella melitensis bv. 2 str.
           63/9]
 gi|326408767|gb|ADZ65832.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis M28]
 gi|326538485|gb|ADZ86700.1| binding-protein-dependent transport systems inner membrane
           component:Tetracycline resistance protein [Brucella
           melitensis M5-90]
          Length = 343

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 211 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 270

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 271 FIGLFKDTSLVYIIGMFDLLGI 292


>gi|54307243|ref|YP_128263.1| amino acid ABC transporter permease [Photobacterium profundum SS9]
 gi|46911663|emb|CAG18461.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 241

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 17/202 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250
           F+ ++ I L+L      R +       L  LYIS F   G P LV L  L Y L    P+
Sbjct: 50  FALIIAITLALV-----RVYKLPVLNQLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPI 102

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                FIG       F +  I LS + AA++AE +R+ +I V R Q EA++A+G+T  +A
Sbjct: 103 -----FIGLDA----FSAAVIGLSLHFAAYMAESIRAAIIGVDRCQREASLAIGMTEMQA 153

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA R  +P L + +++++K++SLA  +G A++++      + + +  E  L  
Sbjct: 154 MRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAV 213

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
            FIY  L +++    N   AK+
Sbjct: 214 AFIYWGLVLVLTQVQNWAEAKL 235


>gi|197286729|ref|YP_002152601.1| amino acid ABC transporter permease [Proteus mirabilis HI4320]
 gi|194684216|emb|CAR45715.1| putative amino acid ABC transporter, permease protein [Proteus
           mirabilis HI4320]
          Length = 249

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+  T+++IA  V++G++A+ +GQ +A ++LG    +    ++LPQA+R +
Sbjct: 94  PEITTVICALALITSSYIAHGVKAGILAIGKGQWQAGLSLGFNRWQTLWYIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG  +L  +   + N++    +E+ L   FIY  L   + 
Sbjct: 154 VPSFINQWIALIKDTSLAYVVGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLE 213

Query: 383 LFMNRLNAKIALKEKK 398
           L  NR+      +++K
Sbjct: 214 LIANRVGKLFTTQKEK 229


>gi|153809859|ref|ZP_01962527.1| hypothetical protein RUMOBE_00240 [Ruminococcus obeum ATCC 29174]
 gi|149834037|gb|EDM89117.1| hypothetical protein RUMOBE_00240 [Ruminococcus obeum ATCC 29174]
          Length = 272

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 30/223 (13%)

Query: 193 SFVLGIVLSLF---------ATRLSRHFHEKTGKAL-------PLLYISTF---LIFGLP 233
            FVL ++L+L          A  + R+ H + G  L       PL +I+T    ++   P
Sbjct: 49  GFVLALILALMRMSNIRPFRALAVDRNGHLREGGPLVWLSKFNPLSFIATAYVEILRSTP 108

Query: 234 TLVLIALKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LV I + Y   F   D P    F FI  +   P      +AL   + A++ EI+R+G+ 
Sbjct: 109 VLVQIFIIYYGVFGMIDLPSFQLFGFIKFNRFFPGV----VALGMNSGAYLCEIMRAGIQ 164

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EAA +LGL+     R ++LPQA+++I+P + ++++ ++K S++   +G  D++
Sbjct: 165 SIDQGQTEAARSLGLSQTMNLRYIILPQALKNILPAIANEFVVIIKESAITYTIGVQDIM 224

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMNRLN 389
           S    +   T   IE +L+   IY  L    S +IA F  R++
Sbjct: 225 SAVNAVKGATFIIIEPLLVATAIYFCLCFPTSKLIAYFERRMS 267


>gi|16079988|ref|NP_390814.1| sulfur-containing amino acid ABC transporter permease [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221310880|ref|ZP_03592727.1| hypothetical protein Bsubs1_16026 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315205|ref|ZP_03597010.1| hypothetical protein BsubsN3_15922 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320123|ref|ZP_03601417.1| hypothetical protein BsubsJ_15838 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324405|ref|ZP_03605699.1| hypothetical protein BsubsS_15997 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|7674447|sp|O34315|TCYL_BACSU RecName: Full=L-cystine transport system permease protein tcyL
 gi|2293249|gb|AAC00327.1| amino acid transporter [Bacillus subtilis]
 gi|2635401|emb|CAB14896.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 239

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 116/233 (49%), Gaps = 15/233 (6%)

Query: 171 LNNRGLSFPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +N  G   PTLT  +     I   S + G VL LF   L R ++      L  +YIS F 
Sbjct: 7   MNMIGDFVPTLTAYLPVTLYILTLSLLFGFVLGLFLA-LPRIYNIPIVNQLAKVYISFFR 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA---FIAEIV 285
             G P +V +   + + +  P L     I  S + P     Y A++ Y  +     AEI+
Sbjct: 66  --GTPIMVQL---FIVFYGIPALTGLIGIDTSKMDP----FYAAVATYALSNAAAAAEII 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V +GQ EAA ++GL+  +A R ++LPQA+    P + +  ++ LK++SLA ++G
Sbjct: 117 RAGVGSVDKGQTEAAYSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D+   G T+I  +  ++E+ +    +Y +++++   F      +I   + +
Sbjct: 177 VMDMSGRGQTLITSSNHSLEVYIALSIVYYAVAVLFEWFFRVAEKRIKKNQTR 229


>gi|134290995|ref|YP_001114764.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134134184|gb|ABO58509.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 248

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S V P     Y    ++L+  TA + AEIVR GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFVWPLLRDPYACAVLSLALCTAGYTAEIVRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ +I   +  L  +++
Sbjct: 198 FVCAALIYLGLNFIIVRVLGALEWRLS 224


>gi|313895906|ref|ZP_07829460.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975331|gb|EFR40792.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 227

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 1/128 (0%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++A     AA+ AEI R+G+ AVPRGQ EAA  LG+++  A R ++LPQ +R  +PP+++
Sbjct: 101 FLAFVLNYAAYFAEIFRAGIQAVPRGQYEAARVLGMSYPLALRRIILPQVLRITLPPVSN 160

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +NL+K++SL   +   DL+ V  TI+ +      +++   F YL+++  +     +L 
Sbjct: 161 ETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTPLVIAGAF-YLAMTAALTWGFKKLE 219

Query: 390 AKIALKEK 397
           A     ++
Sbjct: 220 AHYGRYDR 227


>gi|302337319|ref|YP_003802525.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634504|gb|ADK79931.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 22/203 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ ++G+V+ +      R+ H+     +  +Y+S   I   P LV +   Y + F  P 
Sbjct: 32  LFALIIGLVVGII-----RYSHKGILGTIAKIYVSA--IRNTPLLVQL---YFVFFGLPR 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG         V   F +  I LS  + A+IAE+V++G  A+PRGQ+EAA ++GL+  + 
Sbjct: 82  LG--------IVLSAFQTGVIGLSFNSGAYIAEMVKAGFQAIPRGQIEAAESIGLSVHQR 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-- 368
            RL+L+PQA   I+P +  Q + L+K++ L   +   ++      + N+T   ++  L  
Sbjct: 134 FRLILIPQAALQIVPAVGGQMVQLIKDTCLLSLLAITEITKAATEVGNKTYMFLQAFLFA 193

Query: 369 --IWMFIYLSLSIMIALFMNRLN 389
             I++ + + L+I I LF  ++N
Sbjct: 194 GIIYLIVNMLLNIAIDLFERKIN 216


>gi|295398548|ref|ZP_06808581.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294973212|gb|EFG49006.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 230

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+ + +A I+EI+R GL A+P+GQ EA ++ GLT  +    +LLPQA+RS+ P + SQ 
Sbjct: 94  ALTIFESAMISEIIRGGLNAIPKGQAEAGLSTGLTRVQTLIYILLPQAVRSMAPSIVSQL 153

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + L+K++SLA  +   +L      I NQ T   I + +I  F+Y  +  +++ F   L+ 
Sbjct: 154 IALIKDTSLATIISLPELTHNAKIIYNQNTAYVIPMFVIMTFLYWLVCYILSKFSKYLSN 213

Query: 391 K 391
           +
Sbjct: 214 R 214


>gi|294631809|ref|ZP_06710369.1| glutamate permease [Streptomyces sp. e14]
 gi|292835142|gb|EFF93491.1| glutamate permease [Streptomyces sp. e14]
          Length = 221

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 5/146 (3%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG  NF    T++  F  L   L  YT+AF+ E +RSG+  VP GQ EAA ALGL+  + 
Sbjct: 81  LGSQNF---DTINFRFAVL--GLIAYTSAFVCEAIRSGINTVPVGQAEAARALGLSFTQV 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
             LV+LPQA RS++ PLT+  + L KN+++A A+G A+   +  T+I    Q + I  ++
Sbjct: 136 LTLVVLPQAFRSVVGPLTNVLIALTKNTTVAAAIGVAEAAFLMKTMIENEAQLLAISAVF 195

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
            F ++ L++   L +  +  K+A+K 
Sbjct: 196 AFGFVCLTLPTGLILGWVGKKVAVKR 221


>gi|242239815|ref|YP_002987996.1| glutamine ABC transporter permease [Dickeya dadantii Ech703]
 gi|242131872|gb|ACS86174.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 74/118 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++ +G  EA +ALGL+HR   R V+ P A+R ++PPL +Q++  +K
Sbjct: 101 SGAYIAEITRGAVMSIHKGFTEAGLALGLSHRATLRHVITPLALRRMLPPLGNQWIISIK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G ++L      II    +A+EI+     IYL +++++ + M  L  K+ +
Sbjct: 161 DTSLCIVIGVSELTRQAQEIIAGNFRALEILTATAIIYLVITLILTIGMRWLERKLKI 218


>gi|291612200|ref|YP_003541013.1| putative amino acid ABC transporter permease [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|224552833|gb|ACN55047.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. 'Ames Ancestor']
          Length = 269

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 116/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 47  TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 102

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 103 LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 150

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG A+L   G
Sbjct: 151 RGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAYVGMAELWGSG 210

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++    +N L  ++  KE
Sbjct: 211 LSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 253



 Score = 36.6 bits (83), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 46  STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 104

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 105 VQIAILYFGITSVV 118


>gi|167461574|ref|ZP_02326663.1| Glutamine transport system permease protein glnP [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 217

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 93/160 (58%), Gaps = 20/160 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SF++G +L +      R+        L LL++   +I  LP L++I   + + F  P 
Sbjct: 31  VLSFIIGSILGIL-----RYTRIPVVSQLVLLWVE--MIRNLPLLLII---FFVRFALPE 80

Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +G +F+ I          S  IAL+ + +A I+EI+R GL ++ +GQ+EAA + GLT+ +
Sbjct: 81  VGIKFDVI---------TSAIIALTVFESAMISEIIRGGLNSIEKGQIEAARSSGLTYIQ 131

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
               ++ PQA++ ++PP  SQ+++LLK++SLAV +   DL
Sbjct: 132 TLWHIIFPQAVKRMVPPTVSQFISLLKDTSLAVIISAPDL 171



 Score = 39.7 bits (91), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 38/57 (66%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           GF  T W+A   ++ + IIG+++G  R +   +V+ +  ++VE+ RN+P L++IFF+
Sbjct: 18  GFGITLWMAAVSIVLSFIIGSILGILRYTRIPVVSQLVLLWVEMIRNLPLLLIIFFV 74


>gi|27379091|ref|NP_770620.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27352241|dbj|BAC49245.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 72/116 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  +ALS Y  A+  EI+R+GL +VP+ Q+EA   LGL+  +  R +LLP A+R+ 
Sbjct: 84  PAFEAAAVALSLYFGAYSVEIIRAGLDSVPKNQIEAGQCLGLSGWQVFRHILLPPALRNA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            P +TSQ++ LL  +SLA  V   +L  V G I ++T ++ E+  +   +Y ++++
Sbjct: 144 YPAVTSQFVLLLLGTSLASQVAADELFHVAGFIESRTYRSFEVYAVICAVYFAMAM 199


>gi|18311075|ref|NP_563009.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|18145757|dbj|BAB81799.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
          Length = 502

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 11/161 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF  +LG+++ + A  + R +     K +  +YIS F   G P LV + L   L+F  P 
Sbjct: 309 VFGMILGLIVGI-ALAMIRVYKIPVLKQIAEVYISFFR--GTPLLVQLFL---LYFGVP- 361

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 I        F +  I L    +A+IAEI+RS + A+ +GQMEA ++LG+T  +A
Sbjct: 362 ----QVIPSLQNMSAFTAALIGLGLNASAYIAEILRSSIDAIDKGQMEACLSLGMTMAQA 417

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            + V+LPQA R  IPPL + +++ +K SSLA  +G  +L++
Sbjct: 418 LKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGVVELLA 458


>gi|116490803|ref|YP_810347.1| ABC-type amino acid transport system, permease and periplasmic
           component [Oenococcus oeni PSU-1]
 gi|116091528|gb|ABJ56682.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Oenococcus oeni PSU-1]
          Length = 545

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 70/114 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I +S  T A++AEI+R G+I++ +GQ EAA ALG+TH +    ++LPQA+R+ IP +
Sbjct: 395 SALIIVSINTGAYLAEIIRGGIISIDQGQFEAASALGMTHFQQMEKIVLPQAVRNSIPAV 454

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           T++++  +K++S+   +  ++L   G TI  Q  Q     L    IYL L+  I
Sbjct: 455 TNEFIVNIKDTSVLSIISVSELFFTGSTIAGQNFQFFHTYLTISLIYLVLTFTI 508


>gi|313123999|ref|YP_004034258.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312280562|gb|ADQ61281.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 500

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 76/131 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+  K  R V+ PQA+++I
Sbjct: 365 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQALKNI 424

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ L K+SSL   +G  +L+   G +   T + +  + I M IY  ++ ++  
Sbjct: 425 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFILTR 484

Query: 384 FMNRLNAKIAL 394
            +N    ++ L
Sbjct: 485 LLNYFERRMNL 495



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            +N   NN +K +L     ++   A            S S YA+    G   T  +    
Sbjct: 250 AINKTINNCQKQDL-FNKKYIPAAAKAMKQATSKTNNSMSKYASYFATGLGYTMIITICS 308

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +    ++G +    RLS NKL+  I   Y+E  R  P +V I F+Y
Sbjct: 309 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 354


>gi|257487793|ref|ZP_05641834.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 174

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 45  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 104

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 105 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 164

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 165 RQIEKRVAL 173


>gi|172056714|ref|YP_001813174.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
 gi|171989235|gb|ACB60157.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
          Length = 215

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 76/131 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +L   LS + +A+I+E  R+ + +V RGQ EAA +LG+  RK  + V+LPQA+   IP
Sbjct: 85  FQALAFGLSLHFSAYISESFRAAISSVDRGQWEAADSLGIPRRKTFKDVILPQALSRAIP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++  ++++K++SL   V   +L  V   I   T   + ++L    IY  +S +I    
Sbjct: 145 PLSNSVIDIIKSTSLGTIVAVEELTYVSDQISATTYLVMPLLLFSAAIYWIMSTLIQGVQ 204

Query: 386 NRLNAKIALKE 396
           +RL A+ ++ E
Sbjct: 205 HRLEARFSIPE 215


>gi|330901738|gb|EGH33157.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330981317|gb|EGH79420.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 220

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|270260985|ref|ZP_06189258.1| transporter [Serratia odorifera 4Rx13]
 gi|270044469|gb|EFA17560.1| transporter [Serratia odorifera 4Rx13]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 90  FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSRRETIRYVIMPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRMKI 218


>gi|260854102|ref|YP_003227993.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O26:H11 str. 11368]
 gi|260866977|ref|YP_003233379.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O111:H- str. 11128]
 gi|257752751|dbj|BAI24253.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O26:H11 str. 11368]
 gi|257763333|dbj|BAI34828.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O111:H- str. 11128]
 gi|323175570|gb|EFZ61165.1| glutamine transport system permease protein glnP [Escherichia coli
           1180]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V     G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  
Sbjct: 25  ISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  
Sbjct: 79  PM--AFNDL---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRW 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               +YL ++++++  + RL  ++ +
Sbjct: 193 AVAVLYLIITLVLSFILRRLERRMKI 218


>gi|104784170|ref|YP_610668.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95113157|emb|CAK17885.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 63/103 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L  + A+ + E+VR  L ++PRGQ EA +++GL   +    VLLPQA++ +
Sbjct: 88  PSFWCAVLVLGLWGASEVGEVVRGALQSLPRGQREAGLSIGLGGWQLYGYVLLPQALKRM 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            PP  + Y  ++K SSLAV +G  D++ VG  II +T +++ I
Sbjct: 148 TPPTINIYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLI 190


>gi|330969355|gb|EGH69421.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 283

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 154 IALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 213

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 214 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 272


>gi|260430204|ref|ZP_05784178.1| ABC transporter permease protein [Citreicella sp. SE45]
 gi|260418676|gb|EEX11932.1| ABC transporter permease protein [Citreicella sp. SE45]
          Length = 221

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 72/127 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +++  +ALS  + AF AE+ R G++++ RGQ E   ALG+TH    R V++PQA+  ++P
Sbjct: 91  YVAAVLALSTQSGAFYAEVFRGGIVSIERGQWEGGRALGMTHSALMRRVIVPQAIARMVP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P   +   LLK ++LA  + +ADL+     +  +T + +E+      +YL L +  + F 
Sbjct: 151 PFIERSFELLKTTALASTLAYADLLYQAMMVNAETFRPLEVYTTIALMYLVLLVTASQFA 210

Query: 386 NRLNAKI 392
               A++
Sbjct: 211 RLAEARL 217


>gi|254505865|ref|ZP_05118010.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219551088|gb|EED28068.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 264

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 15/179 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI + S +  +V+ L  T L +  +   G+AL   YI   LI   P LV I L Y +   
Sbjct: 68  KISLISLLFTLVIGL-TTALLKLSNSVVGRALATGYIE--LIRNTPLLVQIYLLYFVF-- 122

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PV+G             F +  +ALS +  A+ AEI R GL ++ +GQ EAA +LGL  
Sbjct: 123 GPVIGL----------DRFATAVLALSLFQGAYTAEIFRGGLNSISKGQFEAAKSLGLNP 172

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                 V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL + G  I+ +T    EI
Sbjct: 173 FYTYYDVILPQLLQRTLPPLTNEVVSLVKNSSIVSVMAIFDLTTEGRNIVAETAMPFEI 231


>gi|119025489|ref|YP_909334.1| permease protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154486921|ref|ZP_02028328.1| hypothetical protein BIFADO_00754 [Bifidobacterium adolescentis
           L2-32]
 gi|118765073|dbj|BAF39252.1| permease protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154084784|gb|EDN83829.1| hypothetical protein BIFADO_00754 [Bifidobacterium adolescentis
           L2-32]
          Length = 327

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I   +V   F + ++ L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++  
Sbjct: 204 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLN 389
             YL ++ ++ +  +RL 
Sbjct: 264 IWYLVITSILMVIQSRLE 281


>gi|229822721|ref|ZP_04448791.1| hypothetical protein GCWU000282_00009 [Catonella morbi ATCC 51271]
 gi|229787534|gb|EEP23648.1| hypothetical protein GCWU000282_00009 [Catonella morbi ATCC 51271]
          Length = 229

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 97/179 (54%), Gaps = 13/179 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+ + YIS F   G+P LV +   + +++  P++G         V   F +  + LS  
Sbjct: 63  RAIAIAYISFFR--GVPLLVTL---FFIYYGLPLMG--------IVMSAFTAAILGLSIT 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A+ AEI+R+G+  V +GQ EAA A+GL++R++ R V++PQA R  IPPL++  L+L+K
Sbjct: 110 ASAYTAEIIRAGIEGVEKGQWEAAFAVGLSYRQSLRYVVIPQATRLAIPPLSNVMLDLVK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SS+A  +   ++      +       + + ++   IY  +    +L   +L  + AL 
Sbjct: 170 SSSIAAIISVPEIFQKAKVVGASEHDFMTMYILVAVIYWLICTAYSLLQAKLERRFALD 228


>gi|196045258|ref|ZP_03112490.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus 03BB108]
 gi|196023842|gb|EDX62517.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus 03BB108]
          Length = 230

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|157363726|ref|YP_001470493.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157314330|gb|ABV33429.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 223

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 112/202 (55%), Gaps = 18/202 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F++GI+L +      R +  K  + +   +I   LI G P LV +   + L++  PV G
Sbjct: 32  GFIMGIILCV-----GRIYGRKIIRFICAGFIE--LIRGTPMLVQL---FILYYGLPVYG 81

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    ++P  M+  I     ++A+ AE +R  + ++  GQM AA+++G+T  +A R
Sbjct: 82  -------IRLTP-LMAALIGFCINSSAYQAEYIRGAIQSIGSGQMVAALSIGMTKWQAVR 133

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L++LPQA+R +IP  T++++ LLK +S+A  +G  ++++    I ++  +  ++ L+  F
Sbjct: 134 LIILPQALRRVIPAWTNEFIYLLKYTSMAYIIGAPEMMAQAKFIASRNFEFFKVYLLTAF 193

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
           IY++L  +  +  ++L  ++ +
Sbjct: 194 IYIALVWLATVLFSKLEKRLQI 215



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T ++     I   I+G ++  GR+   K++ +IC  ++E+ R  P LV +F L
Sbjct: 14  LLNGLVTTLYMTLFAAITGFIMGIILCVGRIYGRKIIRFICAGFIELIRGTPMLVQLFIL 73

Query: 149 Y 149
           Y
Sbjct: 74  Y 74


>gi|148559315|ref|YP_001258725.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148370572|gb|ABQ60551.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
          Length = 385

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTSLVVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|27379090|ref|NP_770619.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27352240|dbj|BAC49244.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 216

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 7/156 (4%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI L +  +F  PV     F+G     P  +++ +A + YTAAF+ EI R GL AV + Q
Sbjct: 64  LIGLLFFFYFGMPV-----FLGIQV--PALVAVTVAYTLYTAAFLGEIWRGGLEAVKQAQ 116

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA   LGL+  +  R ++ PQA+R  +PP     + L+K +SLA  +GF +L   G  +
Sbjct: 117 WEAGACLGLSAWQQFRHIIAPQALRLSLPPTVGFLVQLIKGTSLASILGFVELARAGQVV 176

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              T Q +    +   IY +L + + L+   L A++
Sbjct: 177 SAATFQPLLTYALVAAIYFALCLPLTLWSRSLEARL 212


>gi|16079453|ref|NP_390277.1| High affinity arginine ABC transporter permease [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221310317|ref|ZP_03592164.1| hypothetical protein Bsubs1_13151 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314641|ref|ZP_03596446.1| hypothetical protein BsubsN3_13072 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319564|ref|ZP_03600858.1| hypothetical protein BsubsJ_12993 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323840|ref|ZP_03605134.1| hypothetical protein BsubsS_13122 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321311878|ref|YP_004204165.1| High affinity arginine ABC transporter permease [Bacillus subtilis
           BSn5]
 gi|1731063|sp|P54536|ARTQ_BACSU RecName: Full=Arginine transport system permease protein ArtQ
 gi|1303950|dbj|BAA12605.1| YqiY [Bacillus subtilis]
 gi|2634831|emb|CAB14328.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|291484835|dbj|BAI85910.1| hypothetical protein BSNT_03567 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320018152|gb|ADV93138.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis BSn5]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +   +LGIVLSL      R       F+    +  PL+     + FGLP L    L +Q+
Sbjct: 31  IIGLILGIVLSLCKISTFRPFIWIADFYTSVFRGTPLVLQLMIVYFGLPQL----LGFQI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                               +F +  +ALS  +AA+++EI+R+G+ A+ +GQ EAA+ALG
Sbjct: 87  D-------------------QFWAAVVALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           + + K  + +LLPQA ++I P + ++ + L K S++   +G  D++
Sbjct: 128 VPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDVM 173


>gi|254854300|ref|ZP_05243648.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|258607692|gb|EEW20300.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
          Length = 238

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 24/211 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++LSL      R +       L  +YIS F   G P +V +   + + +  P 
Sbjct: 33  IFGFILGVLLSL-----PRIYKIPVLDQLARVYISFFR--GTPIMVQL---FIVFYGIPA 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L     I  S + P    LY A++ Y   +AA IAE++R+G+ +V  GQ EAA ++GL+ 
Sbjct: 83  LSSIVGIDLSQMDP----LYAAIATYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSS 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    ++LPQA+   +P   +  +  LK++SLA ++G  D+   G T+I  +  A+E  
Sbjct: 139 HQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALE-- 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +Y+SLSI+  L    L       EK+
Sbjct: 197 -----VYISLSIIYYLTAVLLEYSFKWIEKR 222


>gi|229543204|ref|ZP_04432264.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229327624|gb|EEN93299.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 230

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 79/127 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  I  S    A+ +EI+R+ ++++P+GQ EAA ++G+ + +A R ++LPQA+R  +
Sbjct: 97  SFPAAIIGFSLNVGAYASEIIRAAILSIPKGQWEAAYSIGMNYSQALRRIVLPQAVRVSV 156

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL++ +++L+K++SLA  +  ADL      I + T Q + + +   F+Y  + +++++ 
Sbjct: 157 PPLSNTFISLVKDTSLASLILVADLFRKAQEIASTTYQFMLLYVEAAFLYWVICLILSII 216

Query: 385 MNRLNAK 391
             +L  +
Sbjct: 217 QQKLEGR 223


>gi|90419463|ref|ZP_01227373.1| putative ABC transporter permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336400|gb|EAS50141.1| putative ABC transporter permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 224

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 60/86 (69%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S   AL+  ++A+ AEI R+G+ A+PRGQ EAA ++GL+     R V+LPQA+R +IP
Sbjct: 93  FASATTALTMISSAYTAEIYRAGIEAIPRGQFEAAQSIGLSQWFLMRDVVLPQAIRIVIP 152

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
           PLT+  +N++K+++LA  V   DL+ 
Sbjct: 153 PLTNNSINVMKDTALASVVALPDLLK 178


>gi|326202620|ref|ZP_08192488.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter, inner
           membrane subunit [Clostridium papyrosolvens DSM 2782]
 gi|325987204|gb|EGD48032.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter, inner
           membrane subunit [Clostridium papyrosolvens DSM 2782]
          Length = 221

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 87/149 (58%), Gaps = 9/149 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + + +LG+++      L +  H K  KA+   YI    I G P LV I L + L    
Sbjct: 23  IAILTVILGVIIGT-VIALMKISHNKVLKAVASSYIE--FIRGTPLLVQITLFFYL---- 75

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L +F+  G       F+   IA+S  + A++AEI+R+G+ AV +GQMEAA ++G TH 
Sbjct: 76  ISLPEFHIFGLEL--ERFIPGVIAMSVNSGAYVAEIIRAGIQAVDKGQMEAARSIGFTHG 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A R ++LPQA+R+I+P L ++++ ++K 
Sbjct: 134 QAMRYIVLPQALRNILPALGNEFVVVIKE 162


>gi|320177859|gb|EFW52845.1| Glutamate transport membrane-spanning protein [Shigella boydii ATCC
           9905]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHVALVFIE--MIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|311070992|ref|YP_003975915.1| putative ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310871509|gb|ADP34984.1| putative ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 225

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 94/172 (54%), Gaps = 13/172 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G+P LV++   + L+F  P +G    I  S V+   +      S  +AA+I
Sbjct: 64  LYIS--FMRGVPILVIL---FILYFGFPYIG----IEFSAVTAALL----GFSLNSAAYI 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RS + +V +GQ EAA +LGL++ K  R V+LPQ++R  +PPL +  L+L+K SSLA
Sbjct: 111 AEINRSAISSVDKGQWEAAASLGLSYWKTMRGVILPQSVRVALPPLANVLLDLIKASSLA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+     I  +    + + ++   IY ++    A F N L  K A
Sbjct: 171 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSFAAAFQNILEKKYA 222



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++F  M   T++G  +   R+S   L+ W  R+Y+   R +P LV++F L
Sbjct: 22  VIKGIWYTLLISFVSMFAGTMLGLFISLARMSKFALLRWPARLYISFMRGVPILVILFIL 81

Query: 149 Y 149
           Y
Sbjct: 82  Y 82


>gi|300309410|ref|YP_003773502.1| glutamine ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300072195|gb|ADJ61594.1| ABC-type glutamine transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 250

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 78/133 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +A++  + A+++EI R+G+ ++ RGQ EA+ +LG+++    R V+LPQA R ++P
Sbjct: 118 FASAVLAITLNSGAYVSEIFRAGIQSIDRGQSEASRSLGMSYLATLRRVVLPQAFRRMLP 177

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  + ++K+SSLA A+G A+L     T+     +  E  L    IY  +++ ++  +
Sbjct: 178 PLGNNAIAIVKDSSLASAIGLAELAYAARTVSGAYARYWEPYLTISVIYWLITLALSALV 237

Query: 386 NRLNAKIALKEKK 398
             L A+    + +
Sbjct: 238 RHLEARYGKGDAR 250


>gi|241765005|ref|ZP_04763001.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241365402|gb|EER60195.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 221

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E +S  +    + AA+ +EI+R+G+ +VPRGQ+ A  ALG+T+ +  +LV+LPQ
Sbjct: 85  GRPIGAE-VSAVVTFVAFEAAYFSEIMRAGIQSVPRGQVFAGQALGMTYGQNMKLVVLPQ 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  D++          G+ IE  L    +Y  + 
Sbjct: 144 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEVAGKNFGRPIEAYLAAAVLYFVMC 203

Query: 379 IMIALFMNRLNAKIAL 394
             ++  + RL+ KIA+
Sbjct: 204 YALSWMVKRLHQKIAI 219


>gi|171057832|ref|YP_001790181.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170775277|gb|ACB33416.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 250

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +ALS    A+I+EI R+G+ ++ RGQ +AA +LG TH ++ R V+LPQA R ++P
Sbjct: 119 FFSGCLALSLNAGAYISEIFRAGIQSIHRGQTQAAYSLGFTHAQSMRFVVLPQAFRRMVP 178

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            L ++ + L+K+SSL  A+G A+L     T+
Sbjct: 179 ALVNEGVTLIKDSSLVSAIGLAELALAARTV 209


>gi|324328060|gb|ADY23320.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 219

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  R ++ PQA+++I
Sbjct: 87  PAFVAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMRNIIFPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKAIEGRM 215


>gi|304413343|ref|ZP_07394816.1| permease component of ABC-type amino acid transport system
           [Candidatus Regiella insecticola LSR1]
 gi|304284186|gb|EFL92579.1| permease component of ABC-type amino acid transport system
           [Candidatus Regiella insecticola LSR1]
          Length = 218

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 100/187 (53%), Gaps = 12/187 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R +  K    + L++I   LI G P +V +   Y   F  P++          + P F 
Sbjct: 43  ARAYGGKISSNIALVFIE--LIRGTPIIVQVMFIY---FAMPIMMPIR------IDP-FT 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R   R V+ P A+R ++PPL
Sbjct: 91  AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSKRDTLRYVIAPLALRRMLPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + +
Sbjct: 151 GNQWIVSIKDTSLFMVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLVITLALSFVLRK 210

Query: 388 LNAKIAL 394
           +  K+ +
Sbjct: 211 VEKKLKI 217


>gi|326790343|ref|YP_004308164.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326541107|gb|ADZ82966.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 240

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 68/105 (64%), Gaps = 2/105 (1%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           IGG     +F+   + +  Y  A++AE++R+G+ AVP+GQ+EAA + G ++ +A R ++L
Sbjct: 87  IGGRV--DKFLLGVMGVGIYHGAYVAEVIRTGIEAVPKGQLEAANSQGFSYIQAMRYIIL 144

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           PQ ++ I+PPL +Q LNL+KN+S+   V   DL+    +  + +G
Sbjct: 145 PQTIKIIMPPLANQALNLVKNTSVLAMVAGLDLMYFADSWASSSG 189



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T  ++  G++ A ++G L G    +  K +  I RVY+E+F+N P ++ IFF Y
Sbjct: 21  LQGFSMTLRVSIVGLLVAIMLGVLFGVLYSTKRKPLKLIARVYIEIFQNTPLVIQIFFYY 80

Query: 150 KSVLSVLP 157
               S LP
Sbjct: 81  ----SCLP 84


>gi|317047473|ref|YP_004115121.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949090|gb|ADU68565.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 242

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 86/156 (55%), Gaps = 9/156 (5%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S V P     F+   +ALS  TAA+ AEI+R  L+AVP GQ+EA +A G++
Sbjct: 77  LGQFGVIRHSFVWPFLREPFICAVLALSLCTAAYTAEILRGALLAVPPGQVEAGLACGMS 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T + +E+
Sbjct: 137 RGLLLRRIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEV 196

Query: 367 ILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398
            L    IYL L+ +I    AL   RL   +   EKK
Sbjct: 197 FLCAAAIYLILNFIIVQLYALLERRLT-PVHRVEKK 231


>gi|254693492|ref|ZP_05155320.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 3 str. Tulya]
 gi|261213750|ref|ZP_05928031.1| ABC-type amino acid transporter permease [Brucella abortus bv. 3
           str. Tulya]
 gi|260915357|gb|EEX82218.1| ABC-type amino acid transporter permease [Brucella abortus bv. 3
           str. Tulya]
          Length = 343

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 211 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 270

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 271 FIGLFKDTSLVYIIGMFDLLGI 292


>gi|238897603|ref|YP_002923282.1| high-affinity glutamine transport protein (ABC superfamily,
           membrane) [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465360|gb|ACQ67134.1| high-affinity glutamine transport protein (ABC superfamily,
           membrane) [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 218

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 12/187 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R +  K    + L++I   LI G P +V +   Y   F  P++          + P F 
Sbjct: 43  TRAYGGKISSNVALIFIE--LIRGTPIVVQVMFIY---FALPMMVPIR------IDP-FT 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R   R V+ P A+R ++PPL
Sbjct: 91  AAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRDTLRYVVAPLALRRMLPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q++  +K++SL + +G A+L   G  II    +A+EI      +YL +++ +   + R
Sbjct: 151 GNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVMYLIITLTLGFVLRR 210

Query: 388 LNAKIAL 394
           L  K+ +
Sbjct: 211 LERKLKI 217


>gi|221197499|ref|ZP_03570546.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221204172|ref|ZP_03577190.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221176338|gb|EEE08767.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221184053|gb|EEE16453.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 221

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 115/238 (48%), Gaps = 25/238 (10%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D S+V P+  F+  +GL+   LT+   A   +   +LG VLSL     SR          
Sbjct: 4   DFSVVWPY-WFVLVKGLA---LTLAYTATCAIVGSLLGFVLSLLRMSPSRWLRGPVAA-- 57

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              Y+  F   G P L+ +   + + F  PV+ +          P ++S+ I+L+ Y AA
Sbjct: 58  ---YVEFFR--GTPLLIQL---FWVFFCFPVVLRLPI-------PPYLSVLISLTLYMAA 102

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
             +E  R  L ++   Q +A IAL L+       V+ PQA+   IPPL S  ++L K S+
Sbjct: 103 ITSETFRGSLKSIAGEQHDACIALSLSPHVKIVYVIFPQALLRAIPPLLSNVVSLFKESA 162

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L  +VG ADL+ VG  + N T + +E    + +I+  +   L+ ++ +  +R+  + A
Sbjct: 163 LISSVGIADLMFVGQNVSNSTARPVEFLTTVAVIYFLVAFPLTRLVGVVESRMLRRYA 220


>gi|28868348|ref|NP_790967.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851585|gb|AAO54662.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 243

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 114 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 173

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 174 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 232


>gi|83595861|gb|ABC25223.1| general amino acid ABC transporter, permease protein [uncultured
           marine bacterium Ant4D3]
          Length = 369

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 19/175 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP--TLVLI 238
           LT+       VFS  LGI+L+L      R  +    K   + +I    I G+P  TL+ +
Sbjct: 164 LTLTIGVTGIVFSLPLGILLAL-----GRQSNLPIIKYFCIGFIE--FIRGVPLITLLFV 216

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A     +F  P           T     M + I ++ + +A++AE++R GL A+P+GQ+E
Sbjct: 217 ASTMLSYFLPP----------GTTFDLLMRVLIMVTLFASAYMAEVIRGGLQALPKGQLE 266

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           AA +LGL + +A R ++LPQA++  IP + + ++ L K+S+L + +G  D + +G
Sbjct: 267 AAESLGLNYGQAMRFIILPQALKISIPGIVNTFIGLYKDSTLVIVIGLLDPLGIG 321


>gi|24372629|ref|NP_716671.1| amino acid ABC transporter, permease protein [Shewanella oneidensis
           MR-1]
 gi|24346665|gb|AAN54116.1|AE015549_2 amino acid ABC transporter, permease protein [Shewanella oneidensis
           MR-1]
          Length = 226

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 77/123 (62%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     +L++LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++F+  S + M++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFMLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|225862405|ref|YP_002747783.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus 03BB102]
 gi|225786434|gb|ACO26651.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus 03BB102]
          Length = 230

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|254512274|ref|ZP_05124341.1| amino acid ABC transporter, permease protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221535985|gb|EEE38973.1| amino acid ABC transporter, permease protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 432

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 75/118 (63%), Gaps = 2/118 (1%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L F   V+  + F  GS+V   F+ + I ++ ++AA+IAE++R GL A+PRGQ EAA +L
Sbjct: 276 LLFVASVMLSYFFPPGSSVD-LFLRVMIMITMFSAAYIAEVIRGGLAALPRGQYEAADSL 334

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
           GL + +A RL++LPQA++  IP + +  + L K+++L   +   DLV  + G I+  T
Sbjct: 335 GLDYPQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILAST 392


>gi|114046424|ref|YP_736974.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           sp. MR-7]
 gi|113887866|gb|ABI41917.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sp. MR-7]
          Length = 226

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 77/123 (62%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     +L++LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKLIILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++F+  S + M++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSIPLFTCALIYLFLTYSFTFMLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|283783516|ref|YP_003374270.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|283441667|gb|ADB14133.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
          Length = 333

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 4/143 (2%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + +     +  + LS   +A+++EIVR+GL AV  GQ+EAA ALG+      R
Sbjct: 146 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 205

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL--- 368
            V+LPQAMR I+PPL ++ + +LK +SL +AV F  +L      I N+  + I ++L   
Sbjct: 206 RVILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 265

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           IW  I  S+ +++   + +  AK
Sbjct: 266 IWYLIITSILMVLQYMLEKHFAK 288


>gi|158422441|ref|YP_001523733.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158329330|dbj|BAF86815.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 220

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 75/131 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +ALS Y  +F AEI+R G++++ RGQ EA  ALG+   +  R V+LPQA++ ++P
Sbjct: 90  FTAGILALSLYGGSFYAEIIRGGIVSIDRGQTEAGEALGMVPSQIMRRVVLPQALKRMVP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q +   KN+SL   +   DL+  G    + + + +E+  +   IY      + + +
Sbjct: 150 PLMNQSIIQFKNTSLVSVLAVPDLLYQGQVAAHDSYRPLELYTVIAIIYFLALFPLTVLV 209

Query: 386 NRLNAKIALKE 396
            R  A++A+ +
Sbjct: 210 RRGEARLAVTD 220



 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           IG L G  +LS  + V W+   Y+EVFR  P LV + + Y ++
Sbjct: 37  IGLLAGLAKLSPFRPVGWLASAYIEVFRCTPVLVQLIWFYYAM 79


>gi|118469698|ref|YP_891108.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170985|gb|ABK71881.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 590

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 77/125 (61%), Gaps = 5/125 (4%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    AA+I EI RSG+ +V  GQ+EAA ALG ++R + RLV++PQ +R ++P L +Q+
Sbjct: 446 ALGLMAAAYIGEIFRSGIQSVEAGQLEAARALGFSYRSSMRLVVVPQGVRRVLPALMNQF 505

Query: 332 LNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++LLK SSL   +G      +L  VG  +  QTG    ++   +F YL L+I +   +N 
Sbjct: 506 ISLLKASSLVYFLGLIANQRELFQVGRDLNAQTGNLSPLVAAGLF-YLMLTIPLTHLVNY 564

Query: 388 LNAKI 392
           ++ ++
Sbjct: 565 IDNRL 569


>gi|295397425|ref|ZP_06807512.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294974326|gb|EFG50066.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 727

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 85/158 (53%), Gaps = 23/158 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ +S F+ FG+P +                  FN     T+S     + + LS  
Sbjct: 568 RGLPLIVMSFFIYFGIPQM------------------FNI----TISSNLAGI-LTLSLN 604

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++ EIVR G+ A+  GQ EAA +LGLT+ +  R ++LPQA++ ++P   +Q++  LK
Sbjct: 605 AAAYMGEIVRGGIQAIDTGQTEAARSLGLTNGQTMRHIILPQAVKVMVPSFINQFVITLK 664

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++S+   +G  +L   G  II +T Q+  + LI   +Y
Sbjct: 665 DTSILSVIGIVELTQTGRIIIARTYQSGSMWLIVGLMY 702



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T +LA   ++ ATI+G  +G  R S N +++ I  VY+++ R +P +V+ FF
Sbjct: 519 ALLSGLGTTVYLAIVSLVIATILGIFLGLMRTSGNVVLSGIATVYIDIMRGLPLIVMSFF 578

Query: 148 LY 149
           +Y
Sbjct: 579 IY 580


>gi|119383547|ref|YP_914603.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373314|gb|ABL68907.1| L-glutamate ABC transporter membrane protein / L-asparagine ABC
           transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 484

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 57/78 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA++AE++R GL A+P+GQ EAA ALGL + KA RL++LPQA++  IP + S 
Sbjct: 354 IMVTLFAAAYMAEVIRGGLAALPKGQYEAADALGLDYWKAQRLIILPQALKISIPGIVST 413

Query: 331 YLNLLKNSSLAVAVGFAD 348
           ++ + K+++L V VG  D
Sbjct: 414 FIGMFKDTTLVVFVGLFD 431


>gi|17987492|ref|NP_540126.1| general L-amino acid transport system permease protein AAPM
           [Brucella melitensis bv. 1 str. 16M]
 gi|256044434|ref|ZP_05447338.1| general L-amino acid transport system permease protein AAPM
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|260563785|ref|ZP_05834271.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|265990854|ref|ZP_06103411.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17983190|gb|AAL52390.1| general l-amino acid transport system permease protein aapm
           [Brucella melitensis bv. 1 str. 16M]
 gi|260153801|gb|EEW88893.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|263001638|gb|EEZ14213.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 343

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 211 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 270

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 271 FIGLFKDTSLVYIIGMFDLLGI 292


>gi|229171200|ref|ZP_04298793.1| Amino acid ABC transproter, permease [Bacillus cereus MM3]
 gi|228612280|gb|EEK69509.1| Amino acid ABC transproter, permease [Bacillus cereus MM3]
          Length = 230

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 75/126 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F+N L  
Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLDTYIIVGLYYLVLVLLFTYFVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|308235208|ref|ZP_07665945.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
 gi|311114810|ref|YP_003986031.1| ABC transporter system, permease [Gardnerella vaginalis ATCC 14019]
 gi|310946304|gb|ADP39008.1| ABC superfamily ATP binding cassette transporter system, permease
           protein [Gardnerella vaginalis ATCC 14019]
          Length = 330

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 79/133 (59%), Gaps = 1/133 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V     +  I LS   AA+++EIVR+GL AV  GQ+EAA ALG+      R
Sbjct: 143 EFFSIDSNVVMTSLNAAVIGLSLNEAAYLSEIVRAGLEAVDAGQVEAAQALGMGRSLTMR 202

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR I+PPL ++ + +LK +SL +AV F  +L      + N+  + I ++++  
Sbjct: 203 RVVLPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAVANRIYKPIPLLIVAS 262

Query: 372 FIYLSLSIMIALF 384
             YL ++ ++ +F
Sbjct: 263 IWYLIITSILMVF 275


>gi|300362120|ref|ZP_07058297.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300354739|gb|EFJ70610.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 216

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 34/205 (16%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SF+LG+V         ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFILGLVFGFIRYVKIKYLSTIVGFVIDIIRNLPLLLIIFFTYFGLPEL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+ IAL  +  A +AEIVRSG+ AV  GQME A + G+T
Sbjct: 83  ------------GIVTNPTVASI-IALVVFEGAMLAEIVRSGIAAVDPGQMEGARSNGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A   V++PQA+  +IP L SQ+++L+K++SLA  +   +L+     I +Q       
Sbjct: 130 YMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSLATIIVLPELLFHAQIIYSQNTTY--- 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            LI M++ +++   I  F   + AK
Sbjct: 187 -LIPMYVIIAIMYFIVCFSLSMIAK 210


>gi|66044226|ref|YP_234067.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254933|gb|AAY36029.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 280

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 151 IALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPTQIFWRVTLPQAMRTIIPPTTNQ 210

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 211 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 269


>gi|50119798|ref|YP_048965.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49610324|emb|CAG73768.1| ABC transporter permease protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 313

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 10/183 (5%)

Query: 226 TFLIFGLPTLVLIALKYQL-------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T+   G+PTLV + L Y +           P  G+   + G+T+   F +  +AL  + +
Sbjct: 102 TWFFRGVPTLVQLFLWYNIAALYPTISLSLPFFGEVFSVPGNTLISPFNAAVLALVMHQS 161

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEIVR+G+ +V  GQ+EAA ALG    +     ++PQAMR+I+PP  ++ +  LK +
Sbjct: 162 AYAAEIVRAGIQSVNPGQLEAARALGYRKPQIFFYTVMPQAMRAILPPAGNEVIGQLKTT 221

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKIALK 395
           ++   +   D++     I  +T + I ++L+    YL L+ ++++   ++ R   +  LK
Sbjct: 222 AVVSVISLQDVLYSAQIIYQRTYEVIPLLLVATIWYLLLTSVLSVGQYYIERYFGRSTLK 281

Query: 396 EKK 398
             K
Sbjct: 282 RNK 284


>gi|319790880|ref|YP_004152520.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315593343|gb|ADU34409.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 222

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 77/129 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   + L  Y+ A+++EIVR  + ++ +GQ  AA +LG+T   A R ++LPQA+  +
Sbjct: 87  PAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMAAQSLGMTPGVAMREIVLPQAVVRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL ++++ L+KNS+L   +   D++  G  II+ + +++E+ L    +Y  L+  + L
Sbjct: 147 IPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISVSYRSLEVYLAIALVYFVLTGTMTL 206

Query: 384 FMNRLNAKI 392
            +     K+
Sbjct: 207 VLRHFEQKL 215


>gi|306835974|ref|ZP_07468966.1| amino acid ABC superfamily ATP binding cassette transporter
           [Corynebacterium accolens ATCC 49726]
 gi|304568140|gb|EFM43713.1| amino acid ABC superfamily ATP binding cassette transporter
           [Corynebacterium accolens ATCC 49726]
          Length = 317

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 4/141 (2%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S ++  F    + L    AA++AEIVRSG+ +VP GQ EA+ ALG++     R  +LPQA
Sbjct: 149 SVLTNAFFLAVMGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMSWWMTMRRTVLPQA 208

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILI---WMFIYL 375
           MR IIPP  +++++LLK SSL VA+ +   +    T I+    Q I ++++   W  +  
Sbjct: 209 MRIIIPPTGNEFISLLKTSSLVVAIPYTHEIFGRATDISAALFQPIPLLMVAASWYLVIT 268

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           SL ++   F+ R   + A +E
Sbjct: 269 SLLMVGQYFLERHFERGATRE 289


>gi|300173758|ref|YP_003772924.1| glutamine-binding protein/glutamine transport system permease
           [Leuconostoc gasicomitatum LMG 18811]
 gi|299888137|emb|CBL92105.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 477

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP +  + +                       P F +  I L   
Sbjct: 324 RGLPLMVLAFFIYIGLPGVTGVKI-----------------------PAFTAGIITLILN 360

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    VR G  AV RGQMEAA +LGL +  A R V++PQ +R ++P   +Q++  LK
Sbjct: 361 EGAYTGAFVRGGFEAVNRGQMEAARSLGLPYGSAMRRVIMPQGLRIMVPSFINQFIITLK 420

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  I+ +  Q   +  I   IYL +  ++    N +  K+
Sbjct: 421 DTSILSAIGLLELTQTGTLIVARNSQGFRVWAIIAVIYLIVITLLTWLSNWVEKKL 476


>gi|227501796|ref|ZP_03931845.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           accolens ATCC 49725]
 gi|227077821|gb|EEI15784.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           accolens ATCC 49725]
          Length = 317

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 81/141 (57%), Gaps = 4/141 (2%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S ++  F    + L    AA++AEIVRSG+ +VP GQ EA+ ALG++     R  +LPQA
Sbjct: 149 SVLTNAFFLAVMGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMSWWMTMRRTVLPQA 208

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILI---WMFIYL 375
           MR IIPP  +++++LLK SSL VA+ +   +    T I+    Q I ++++   W  +  
Sbjct: 209 MRIIIPPTGNEFISLLKTSSLVVAIPYTHEIFGRATDISAALFQPIPLLMVAASWYLVIT 268

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           SL ++   F+ R   + A +E
Sbjct: 269 SLLMVGQYFLERHFERGATRE 289


>gi|15806050|ref|NP_294752.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6458756|gb|AAF10601.1|AE001954_5 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 216

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 13/208 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI   S VLG+V       L+R    K    L L +I   L+ G P LV I   + + F 
Sbjct: 22  KITALSLVLGVVGGTLVA-LARLSPFKPLSWLALTFIE--LVRGTPLLVQI---FVIFFG 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L +           EF +   A S  +AA++AEIVR+G+  +P+GQ EA+ +LGL+ 
Sbjct: 76  LPQLLEHPI-------NEFWAGVAAFSVNSAAYVAEIVRAGIQGLPKGQTEASRSLGLSP 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQA   ++PPL ++ ++LLKNSSL  A+   +L   G  + ++T +  E+ 
Sbjct: 129 AQTMRHIILPQAFTRVLPPLVNEAISLLKNSSLLSAISIVELTRAGQLVSSRTFKPFEMY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L    IYL++++ ++    RL A+  ++
Sbjct: 189 LAVSLIYLAMTLFLSWVARRLEARWQVR 216


>gi|330953425|gb|EGH53685.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 179

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 50  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 109

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 110 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 169

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 170 RQIEKRVAL 178


>gi|298252593|ref|ZP_06976387.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
 gi|297532957|gb|EFH71841.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
          Length = 337

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 4/143 (2%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + +     +  + LS   +A+++EIVR+GL AV  GQ+EAA ALG+      R
Sbjct: 150 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 209

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL--- 368
            V+LPQAMR I+PPL ++ + +LK +SL +AV F  +L      I N+  + I ++L   
Sbjct: 210 RVILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 269

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           IW  I  S+ +++   + +  AK
Sbjct: 270 IWYLIITSILMVLQYMLEKHFAK 292


>gi|163843016|ref|YP_001627420.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163673739|gb|ABY37850.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 385

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|117164567|emb|CAJ88113.1| putative ABC transporter permease protein [Streptomyces ambofaciens
           ATCC 23877]
          Length = 343

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 17/225 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV---- 236
           +T+   A   V  F+LG VL+    RLSR    +T     + +   ++   +P +V    
Sbjct: 85  VTLQLTAYATVLGFLLGTVLAFM--RLSRSPVLQT-----VAWTYIWIFRSIPMIVQLVF 137

Query: 237 ---LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
              L AL  +L    P    F  +  +++     +  I L+ + AA+ AEIVR G+I+V 
Sbjct: 138 WFNLSALYQELGIGVPFGPVFWSVDSNSLIGTIGAAIIGLTLHQAAYAAEIVRGGVISVD 197

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ+EAA ALG+   +  R ++LPQAMR+I+P   ++ + LLK +S+   +   +L    
Sbjct: 198 HGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGNEIIGLLKGTSVVYVMSIGELFYQV 257

Query: 354 GTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALK 395
             I  + G+ I ++L+   W  +  SL  +   ++ R  A+ A +
Sbjct: 258 QVIYGRNGRVIPLLLVATAWYVVLTSLLSVAQYYVERRYARGADR 302


>gi|84496803|ref|ZP_00995657.1| putative glutamate transporter permease protein [Janibacter sp.
           HTCC2649]
 gi|84383571|gb|EAP99452.1| putative glutamate transporter permease protein [Janibacter sp.
           HTCC2649]
          Length = 295

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 95/165 (57%), Gaps = 14/165 (8%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L+++   + L+    V         S ++P   ++  AL+ Y  A IAE+VRSG+ +
Sbjct: 116 VPVLIMMIFAFGLYAQNSVFA-------SDINP-LAAVITALTLYNGAVIAELVRSGVYS 167

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EA +A+GLT  +  R + LPQA+ +++P L  Q++ +LK+S+L   + +++L+S
Sbjct: 168 LPKGQGEAGLAVGLTTGQVLRSIQLPQALTAMLPALIGQFVTVLKDSALGYQITYSELLS 227

Query: 352 VGGTII-----NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            GG I+     N     I + ++++ I  SLS +     +RL+ +
Sbjct: 228 -GGKILGSNFANTVPAYIVVAIVFILINYSLSRLAIYVEHRLSRR 271



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)

Query: 78  PYTSDSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           P+ +D +     LV G   T   A   ++ A   G + G GRLS    + W+C   VE F
Sbjct: 54  PFVTDRAVWRDYLVPGLWGTLKAAAISIVLAGTFGLIFGIGRLSTIAPIRWLCGAVVEFF 113

Query: 137 RNIPPLVVIFFLY 149
           R++P L+++ F +
Sbjct: 114 RSVPVLIMMIFAF 126


>gi|309812123|ref|ZP_07705881.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308433810|gb|EFP57684.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 310

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 2/145 (1%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P   + T L  G+ TL    L   + F K +   F  +   T+S       I L   
Sbjct: 110 RAVPRYVLMTILGLGVLTL-YPTLDLGVPFGKDLGLTFYTLDVKTISSGITVGIIGLGLS 168

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEI R+G+++V  GQ EAA ALG+++ KA R ++LPQAMR I+PP  ++ ++++K
Sbjct: 169 EAAYMAEIARAGILSVDNGQREAAQALGMSNGKAMRRIILPQAMRVIVPPTGNEAISMVK 228

Query: 337 NSSLAVAVGF-ADLVSVGGTIINQT 360
           ++SL  AV   A+L +    + N T
Sbjct: 229 DTSLLTAVPVTAELFNQAQNVANNT 253



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 6/107 (5%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           MI   ++G ++   RLS N ++  +  VY+  FR +P  V++  L   VL++ P  D  +
Sbjct: 77  MILGVVLGVILAIMRLSDNPVLRGVAFVYIWFFRAVPRYVLMTILGLGVLTLYPTLDLGV 136

Query: 164 VLPFGMFLNNRGLSFPTLTMDT-NAKIFVFSFVLGIVLSLFATRLSR 209
             PFG  L   GL+F TL + T ++ I V    LG+  + +   ++R
Sbjct: 137 --PFGKDL---GLTFYTLDVKTISSGITVGIIGLGLSEAAYMAEIAR 178


>gi|300858345|ref|YP_003783328.1| hypothetical protein cpfrc_00927 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685799|gb|ADK28721.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206063|gb|ADL10405.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Corynebacterium pseudotuberculosis C231]
 gi|302330613|gb|ADL20807.1| Putative ABC transport system membrane protein [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276299|gb|ADO26198.1| Putative ABC transport system membrane protein [Corynebacterium
           pseudotuberculosis I19]
          Length = 318

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 4/135 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L    AA++AEIVRSGL AVP GQ EA+ ALG++     R  +LPQAMR I+P
Sbjct: 143 FLLAVLGLGLNEAAYMAEIVRSGLQAVPEGQTEASKALGMSWWMTIRRTVLPQAMRIIVP 202

Query: 326 PLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381
           P  +++++LLK +SL VA+ + A+L      I       + ++L+   W  +  SL ++ 
Sbjct: 203 PTGNEFISLLKTTSLVVAIPYTAELYGRATDIAAALFDPVPLLLVAATWYLVITSLLMIA 262

Query: 382 ALFMNRLNAKIALKE 396
             ++ +   + A +E
Sbjct: 263 QSYLEKYFDRGATRE 277


>gi|229182749|ref|ZP_04309989.1| Amino acid ABC transproter, permease [Bacillus cereus BGSC 6E1]
 gi|228600722|gb|EEK58302.1| Amino acid ABC transproter, permease [Bacillus cereus BGSC 6E1]
          Length = 233

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 92  IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 152 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 211

Query: 391 KIALKE 396
           ++  KE
Sbjct: 212 RLQRKE 217


>gi|157369721|ref|YP_001477710.1| glutamine ABC transporter permease [Serratia proteamaculans 568]
 gi|157321485|gb|ABV40582.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 219

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 90  FSAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRETIRYVIMPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRMKI 218


>gi|323172273|gb|EFZ57911.1| glutamine transport system permease protein glnP [Escherichia coli
           LT-68]
          Length = 219

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIASNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|256392977|ref|YP_003114541.1| polar amino acid ABC transporter inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
 gi|256359203|gb|ACU72700.1| polar amino acid ABC transporter, inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
          Length = 349

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 10/175 (5%)

Query: 227 FLIFGLPTLVLIALKYQ-------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           +LI  LP LV +   Y+       L F  P   +F  +  + +     + +IAL+   AA
Sbjct: 137 WLIRSLPLLVQLLFWYEIASLYPRLSFGIPFGPEFAGVKTAHLFNGVFAAFIALTLDVAA 196

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F +E++R G++AVP GQ+EAA ALGL   +  R ++LPQAM SIIP   +  + +LK +S
Sbjct: 197 FSSELIRGGILAVPSGQVEAAQALGLGKGRIFRRIVLPQAMPSIIPASGNLLIGMLKATS 256

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK 391
           +   +   DL+     I N+  Q I ++L+    Y++L+ ++++   F+ R  A+
Sbjct: 257 VISVIAVQDLLYSTQLIYNENFQVIPLLLVATLWYIALTTVLSIGQYFVERHYAR 311



 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  +IL G   T WL  + +    +IGT V A RLS N ++  +   +V + R++P LV 
Sbjct: 88  FQASILHGLELTLWLTAAVLAAGYLIGTGVAAMRLSPNPILKSLSFGFVWLIRSLPLLVQ 147

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           + F Y+ + S+   P  S  +PFG
Sbjct: 148 LLFWYE-IASLY--PRLSFGIPFG 168


>gi|229817433|ref|ZP_04447715.1| hypothetical protein BIFANG_02695 [Bifidobacterium angulatum DSM
           20098]
 gi|229785222|gb|EEP21336.1| hypothetical protein BIFANG_02695 [Bifidobacterium angulatum DSM
           20098]
          Length = 327

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 81/138 (58%), Gaps = 1/138 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I   +V   F + ++ L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++++ +LK +SL  AV F   +    T I+ +  + I ++++  
Sbjct: 204 RIILPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAISTRLYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLN 389
             YL ++ ++ +  +RL 
Sbjct: 264 IWYLVITSILMVIQSRLE 281


>gi|187926113|ref|YP_001892458.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|241665601|ref|YP_002983960.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|187727867|gb|ACD29031.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|240867628|gb|ACS65288.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 230

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 57/86 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++    ++ Y  AF +E +R+G+ AVPRGQ EAA++LG T R A   V+LPQA+R   
Sbjct: 89  EFLAAAFGIALYAGAFFSEELRAGIRAVPRGQREAALSLGFTPRAAFLRVVLPQALRVSA 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350
            PL  Q  N +KN+SLA+ +G A+L 
Sbjct: 149 LPLLGQCANTIKNTSLAMGIGLAELA 174


>gi|118587810|ref|ZP_01545220.1| probable amino-acid transmembrane abc transporter protein [Stappia
           aggregata IAM 12614]
 gi|118439432|gb|EAV46063.1| probable amino-acid transmembrane abc transporter protein [Stappia
           aggregata IAM 12614]
          Length = 241

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ YT+A++AE+ R  L A+P GQ E   ALG+T  +   L++LPQA R  I P    
Sbjct: 104 IALTLYTSAYLAEVWRGALTAIPSGQHEGGKALGMTFAQIMLLIILPQAFRLAIAPTVGF 163

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIALFMNR 387
            + ++K +SLA  +GF DL++VG    N      +  +I+     IY SL   ++++  R
Sbjct: 164 MVQIIKGTSLAYIIGFHDLMTVGKRWANAPVPGTQPFVIYPLMAMIYFSLCFPLSVWSRR 223

Query: 388 LNAKI 392
           L  ++
Sbjct: 224 LERRL 228


>gi|224369395|ref|YP_002603559.1| GlnP6 [Desulfobacterium autotrophicum HRM2]
 gi|223692112|gb|ACN15395.1| GlnP6 [Desulfobacterium autotrophicum HRM2]
          Length = 223

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 79/135 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I ++  + A+IAEIVR  + ++  GQ EA  ++GLT  +    ++ PQA + +
Sbjct: 89  PPITAGIIIIAVNSGAYIAEIVRGSVQSIDPGQTEAGRSIGLTRSQTMAYIIWPQAFKRM 148

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL +Q++  LK++SL + +G  +L+  G  I+  + +A E+ L    +YL++++ IA 
Sbjct: 149 IPPLGNQFIISLKDTSLLMVIGVGELLRTGQEIVAVSFKAFEVYLSVAVVYLAMTLSIAR 208

Query: 384 FMNRLNAKIALKEKK 398
            +  L   + +K K+
Sbjct: 209 GLRILEHHLEMKTKR 223


>gi|163841375|ref|YP_001625780.1| amino acid ABC transporter permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954851|gb|ABY24366.1| amino acid ABC transporter permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 298

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 3/119 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L    +A++AEI R+GL +V +GQ+EAA ALG+   K  R ++LPQAMR I+P
Sbjct: 149 FVASILGLGLNESAYLAEIFRAGLKSVDKGQIEAADALGIRKSKILRRIVLPQAMRVIVP 208

Query: 326 PLTSQYLNLLKNSSLAVAVG--FADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMI 381
           P  ++ + +LK +SL VAV   F +L      + N+T   I  +LI  F YL + SIM+
Sbjct: 209 PTGNETIGMLKTTSLVVAVPFLFGELTFATTALANKTFLPIPFLLIAAFWYLLITSIMM 267


>gi|153852847|ref|ZP_01994284.1| hypothetical protein DORLON_00266 [Dorea longicatena DSM 13814]
 gi|149754489|gb|EDM64420.1| hypothetical protein DORLON_00266 [Dorea longicatena DSM 13814]
          Length = 247

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 96/170 (56%), Gaps = 20/170 (11%)

Query: 230 FGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           FG+P  L  I LKY+ +++            + V+P  +  +IAL+   +A+ AE++R+ 
Sbjct: 78  FGIPMILKAINLKYETNYN-----------ANGVAP-IIYAFIALAVNESAYNAEVIRAS 125

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP+GQ+EAA ALG+T+ +A R V+LP+A+   +P L + ++ L+K +SLA      +
Sbjct: 126 LESVPKGQIEAANALGMTYFQALRRVILPEAIVVALPSLGNSFIGLIKGTSLAFVCAVVE 185

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + + G  I  +T +  E       +Y+SL+I+  +    +   I L EKK
Sbjct: 186 MTAAGKIIAGRTYRYFE-------VYVSLAIIYWIITIIVEQGIKLIEKK 228


>gi|295398457|ref|ZP_06808496.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
 gi|294973321|gb|EFG49109.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
          Length = 506

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 23/212 (10%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +A    F  ++G  L+L   RLS +   K    +   YI   ++ G P ++ +   Y   
Sbjct: 313 SATAIFFGLIIGAALALM--RLSEN---KLVDLIAQAYIE--VVRGTPLMIQVLFVY--- 362

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                LG     G ST++    S  +A+S  + A+IAEI+R G+ +V +GQ EAA +LGL
Sbjct: 363 -----LGFAGMFGWSTMT----SGLVAVSLNSGAYIAEIIRGGISSVDKGQAEAARSLGL 413

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +    R V+ PQ++RSI P L +++++L+K SS+   +G A+L      +   T   I 
Sbjct: 414 GYWTTMRKVIFPQSLRSIWPSLGNEFVSLIKESSIVSTIGVAELTFQTRNVSTITFNGII 473

Query: 366 IILIWMFIYLSLSIMIALFMN----RLNAKIA 393
            ++I M IY  L+  +   +N    R+N K A
Sbjct: 474 PLIISMAIYFMLTFTLTKLLNVYERRMNEKYA 505



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++YA   + G   T  ++ + +    IIG  +   RLS NKLV  I + Y+EV R  P +
Sbjct: 296 AAYAPYFVNGLKTTLVISATAIFFGLIIGAALALMRLSENKLVDLIAQAYIEVVRGTPLM 355

Query: 143 VVIFFLY 149
           + + F+Y
Sbjct: 356 IQVLFVY 362


>gi|77409325|ref|ZP_00786028.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77172057|gb|EAO75223.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 201

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 75/119 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + A+I+EIVR+G+ AVP GQ+EAA +LG+  +   R V+LPQA  +I+P L ++
Sbjct: 72  IIISLNSGAYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFXNILPALGNE 131

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ ++K+S+L   +G  +L +   +++  T   +  +L   F YL L+ +++  + ++ 
Sbjct: 132 FITIIKDSALLQTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQME 190


>gi|300719077|ref|YP_003743880.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299064913|emb|CAX62033.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 507

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 11/156 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G P L+ + L Y       VL QF    G   SP F+S  +AL     AF AEI+R
Sbjct: 58  YILRGTPVLLQLILLYN------VLPQF----GLRFSP-FLSALLALMINETAFCAEIIR 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G++A  R Q  AA A G +  K    V++PQA+R+I+P + ++ + LLK++SLA  VG 
Sbjct: 107 GGILATDRNQRTAAQAFGYSRTKEMIHVVIPQALRAILPTMGNEAVGLLKSTSLASVVGV 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +L   G TI++Q    I +++    IY+ LS ++A
Sbjct: 167 NELTMRGQTIVSQNFLFIPVLVASGGIYMILSSLLA 202


>gi|218548331|ref|YP_002382122.1| glutamine ABC transporter permease [Escherichia fergusonii ATCC
           35469]
 gi|218355872|emb|CAQ88487.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
 gi|324112751|gb|EGC06727.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia fergusonii B253]
          Length = 219

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|92117597|ref|YP_577326.1| amino acid ABC transporter permease [Nitrobacter hamburgensis X14]
 gi|91800491|gb|ABE62866.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 506

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      + + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T L++
Sbjct: 359 FLPGNFTVDGLVRVLIGVALFAGAYNAEVIRGGLAAIPRGQAEAAHALGLSYWKTTGLIV 418

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PQA+R +IP L + ++ L K++SL   V   DL+ 
Sbjct: 419 MPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 454


>gi|77456471|ref|YP_345976.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380474|gb|ABA71987.1| Diaminopimelate ABC transporter membrane protein / L-cystine ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 221

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 16/193 (8%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RLSR    K+   L  +Y+S F   G P LV +   + +++  P LG         + P 
Sbjct: 44  RLSRF---KSVSWLARIYVSFFR--GTPLLVQL---FVIYYGLPQLGM-------ELDPL 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +L I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  +  R  +LPQAMR+ +P
Sbjct: 89  PAAL-IGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQTLRRAILPQAMRTALP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ +++ F 
Sbjct: 148 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFTMYLAAALIYWILATVLSHFQ 207

Query: 386 NRLNAKIALKEKK 398
           N+L  ++   +++
Sbjct: 208 NKLEERVNRHDQE 220



 Score = 36.2 bits (82), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           RLS  K V+W+ R+YV  FR  P LV +F +Y
Sbjct: 44  RLSRFKSVSWLARIYVSFFRGTPLLVQLFVIY 75


>gi|329295880|ref|ZP_08253216.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 214

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 9/156 (5%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S V P     F+   +ALS  TAA+ AEI+R  L+AVP GQ+EA +A G++
Sbjct: 49  LGQFGVIRHSFVWPFLREPFICAVLALSLCTAAYTAEILRGALLAVPAGQVEAGLACGMS 108

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T + +E+
Sbjct: 109 RWLLLRHIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEV 168

Query: 367 ILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398
            +    IYL L+ +I    AL   RL + +   EKK
Sbjct: 169 FVCAAAIYLILNFIIVQLYALLERRLTS-VHRAEKK 203


>gi|303325414|ref|ZP_07355857.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
 gi|302863330|gb|EFL86261.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
          Length = 267

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 19/206 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S    + L L  T L R    +    L   Y+   +I G+P LV      QL + 
Sbjct: 72  KITVMSICCAVPLGLL-TGLGRISRNRAINLLASTYVE--VIRGIPLLV------QLFYI 122

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              L +F  I G T      S  IA+S    A++ E+ R+G++A+ +GQ EAA +LG   
Sbjct: 123 YYALSRFFQISGIT------SAVIAISVCYGAYMGEVFRAGIMAISKGQSEAARSLGFNR 176

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-- 365
            +    V+LPQA R+I+PP+ ++ + +LK++SL   +   D++    + +  T    E  
Sbjct: 177 FQTMFYVVLPQAWRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFETY 236

Query: 366 --IILIWMFIYLSLSIMIALFMNRLN 389
             I LI++ I L+LS  +++  +RLN
Sbjct: 237 TVIALIYLIITLALSKAVSIMESRLN 262



 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G V TF +    +  A  +G L G GR+S N+ +  +   YVEV R IP LV +F++Y
Sbjct: 66  GVVVTFKITVMSICCAVPLGLLTGLGRISRNRAINLLASTYVEVIRGIPLLVQLFYIY 123


>gi|257866172|ref|ZP_05645825.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872503|ref|ZP_05652156.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257875807|ref|ZP_05655460.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257800106|gb|EEV29158.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806667|gb|EEV35489.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257809973|gb|EEV38793.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 218

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 37/173 (21%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + I VFS VLG+V+ +              + LPLL I  F  F LP    I +++ +  
Sbjct: 46  SSIPVFSKVLGVVIDVI-------------RNLPLLLIIFFTYFALPQ---IGIRFNI-- 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F S  +AL+ + +A ++EI R+GL +VP+GQMEA ++ GL+
Sbjct: 88  -------------------FWSAVVALTIFESAMLSEIFRAGLNSVPKGQMEAGLSTGLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           + +  R +++PQA ++++P + SQ ++L+K++SLAV +   +L      I  Q
Sbjct: 129 YVEVLRSIVVPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELTHHARIIYGQ 181


>gi|326384497|ref|ZP_08206177.1| glutamate abc transporter integral membrane subunit glud [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196842|gb|EGD54036.1| glutamate abc transporter integral membrane subunit glud [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 299

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 8/123 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P L+L+   Y L        ++  +  S +S  F ++   L+ Y  + IAEI+R+G++
Sbjct: 115 AIPVLILMFFAYYL------FAKYAVVPSSQLS--FAAVVFGLTLYNGSVIAEILRAGIL 166

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EAA ++GL   +  R++LLPQA+ +++P L SQ +  LK+S+L  A G+ ++V
Sbjct: 167 AVPKGQSEAASSIGLRKSQMMRMILLPQAVTAMLPALISQMVIALKDSALGYAFGYIEVV 226

Query: 351 SVG 353
             G
Sbjct: 227 RSG 229



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 44/72 (61%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+T   ++ T +L G   T   AF  ++ A I+G L+G GRLS ++ V  +  V VEVFR
Sbjct: 55  PFTVAGTWTTWLLPGLWGTIKAAFVSIVLALILGALLGIGRLSDHRWVRVVSGVIVEVFR 114

Query: 138 NIPPLVVIFFLY 149
            IP L+++FF Y
Sbjct: 115 AIPVLILMFFAY 126


>gi|148253605|ref|YP_001238190.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146405778|gb|ABQ34284.1| amino acid ABC transporter membrane protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 285

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 93/171 (54%), Gaps = 5/171 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAE 283
           T+L  G P ++ + L + L    P +G         V     F++  + L     A+ +E
Sbjct: 108 TWLFRGTPLILQLLLWFNLALVFPTIGIPGLWSARAVDVMTPFLAALLGLGINQGAYTSE 167

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R+GL++V  GQ EAA A+G+   +A R ++LPQAMR +IPPL ++++ L+K +SLA  
Sbjct: 168 VMRAGLLSVDIGQYEAAQAIGMGRLQALRRIILPQAMRVVIPPLGNEFIGLVKATSLASV 227

Query: 344 VGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAK 391
           + + +++     I     + IE++++   W  + +S+   + + + R  A+
Sbjct: 228 IQYPEVLHSAENIYYANSRVIELLIVAGLWYLLVVSILTPLQMLLERRFAR 278


>gi|123966463|ref|YP_001011544.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200829|gb|ABM72437.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9515]
          Length = 339

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 40/251 (15%)

Query: 165 LPFGMFLNNRGLSFP----------TLTMDTNAKIFVFSFVLGIVL------SLFATRLS 208
           +P G++L N GL             TLT+   +   +FS  +GIVL      S+F  +  
Sbjct: 108 VPLGIYLLNGGLGLVPVMTRHWGGLTLTILITSCSILFSLPIGIVLALCRRSSMFLIQKL 167

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
             F+    +A+PL+ +  F    +P  + + L+ +                         
Sbjct: 168 SSFYIDVMRAVPLIAVLFFGQLLIPLFLPVGLEIE---------------------RVWR 206

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA + + +A+IAE +R GL ++P  Q+EAA +LGL   +    +L+PQA+R  +P +T
Sbjct: 207 AIIAFTLFVSAYIAEDIRGGLQSIPNNQIEAAKSLGLNKYQVNIFILIPQALRVALPAIT 266

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFM 385
           +Q + L +N+SL   +G  +L+ V  +I+      GQ IE+ +    +Y     ++A   
Sbjct: 267 NQLIGLFQNTSLMSILGLMELLGVSRSILANPEFIGQYIEVYIWLASVYWLFCTVMAFVS 326

Query: 386 NRLNAKIALKE 396
            +L  ++ + +
Sbjct: 327 KKLEQRMTINK 337


>gi|116254212|ref|YP_770050.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258860|emb|CAK09968.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 230

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 18/211 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQ 243
           T   + V S + G++L  FA  L R    +    +   YI  +L  G P LV LIA+   
Sbjct: 24  TTVWLTVVSLIAGLILG-FALALMRRSSRRVPYYIAKAYI--WLFRGTPLLVQLIAIYTA 80

Query: 244 LHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           L    P+ G +F  I  +          + L+   AA++AEI+R+G+ AVP GQ  AA A
Sbjct: 81  L----PLFGIKFTVIEAAL---------LGLALNEAAYLAEIIRAGIEAVPEGQTRAARA 127

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T R+  R +++PQA + I+PPL +    LLK +S+   +   +L+     +I +   
Sbjct: 128 LGMTERQIMRYIVMPQAFKVIVPPLGNSVNGLLKTTSVTSVISVEELLRRTQVLIQERFM 187

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +E+  +    YL L+ +   F + +  ++ 
Sbjct: 188 VLELFAVAAIYYLLLTTLWDFFQSHIEKRLG 218


>gi|21264490|sp|P52625|PATM_VIBHA RecName: Full=Probable amino-acid ABC transporter permease protein
           patM
 gi|15080757|gb|AAA78255.2| membrane protein [Vibrio harveyi]
          Length = 223

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+      VFS +L ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F F+ G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQI--FPFMVGIDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|315646647|ref|ZP_07899764.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315277973|gb|EFU41294.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 480

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F F+LG++++L      R    K  K L   YI   +I G P LV +   + +H+    L
Sbjct: 292 FGFILGLIIALM-----RMSGVKILKFLATAYIE--IIRGTPMLVQL---FIIHYS---L 338

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F+       SP   S  + LS  +AA++AEI R+G+  V RGQ+EAA +LG+T  KA 
Sbjct: 339 AAFDI----KFSP-IQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTRGKAM 393

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA++ ++P + ++++ ++K SS+   +G  D++     +   T   +  +L+  
Sbjct: 394 RHIILPQALKGVLPAIGNEFVVIIKESSIVSFIGVYDIMYQAQILRGSTFAPLNPLLVAA 453

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  L+ +++  +     K++  + +
Sbjct: 454 MIYFILTFVLSKLLGVWERKLSASDNR 480


>gi|254713863|ref|ZP_05175674.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M644/93/1]
 gi|254717080|ref|ZP_05178891.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M13/05/1]
 gi|261218891|ref|ZP_05933172.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261321610|ref|ZP_05960807.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|260923980|gb|EEX90548.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261294300|gb|EEX97796.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
          Length = 385

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|187919540|ref|YP_001888571.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717978|gb|ACD19201.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 250

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +GQF  I  S + P     +M   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  MGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ +I   +  L  +++
Sbjct: 198 FICAALIYLFLNFVIVRLLGMLETRLS 224


>gi|148260140|ref|YP_001234267.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidiphilium cryptum JF-5]
 gi|326402908|ref|YP_004282989.1| putative amino acid ABC transporter permease [Acidiphilium
           multivorum AIU301]
 gi|146401821|gb|ABQ30348.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidiphilium cryptum JF-5]
 gi|325049769|dbj|BAJ80107.1| putative amino acid ABC transporter permease protein [Acidiphilium
           multivorum AIU301]
          Length = 250

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 96/168 (57%), Gaps = 3/168 (1%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFI--GGSTVSPEFMSLYIALSCYTAAFIAEI 284
           FL+ G P LV I   Y       +L +F+ I  GG T++    +  +AL     A++AEI
Sbjct: 64  FLMRGTPLLVQIVFIYTGLAAAGIL-RFHDIHLGGLTLAGNVQAGILALGLNEGAYMAEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ AV RGQ EAA +LG+   +  R V+LPQA+R ++ P+ +Q+  +LKNS+L   +
Sbjct: 123 FRAGIDAVDRGQTEAAKSLGMVPWQILRYVVLPQALRVVLLPIGNQFNIMLKNSTLVSVI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G ++++ V  TI + T +  E+  +    +L+L+ +    M ++  ++
Sbjct: 183 GVSEMLLVTETINSATFRTFELYSVLALYFLALTTIWGAVMAQVERRM 230


>gi|306843690|ref|ZP_07476290.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306276000|gb|EFM57709.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
          Length = 385

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|296268320|ref|YP_003650952.1| polar amino acid ABC transporter inner membrane subunit
           [Thermobispora bispora DSM 43833]
 gi|296091107|gb|ADG87059.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobispora bispora DSM 43833]
          Length = 277

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 28/210 (13%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           + F FVLG+VL+L   RLS     +   A    YI  F   GLP LV+  +   L    P
Sbjct: 83  YAFGFVLGLVLALM--RLSSVGPYRWIAAT---YIEIFR--GLPALVIFLMIINLPLAFP 135

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F   G       +    + L   +AA++AE  R+GL AVP+GQMEAA +LG+ + +
Sbjct: 136 ---GFRLPGDV-----YGQAALGLGLVSAAYMAETFRAGLQAVPKGQMEAARSLGMPYMR 187

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVG----GTIINQTG 361
           A   +++PQA+R +IPPLT++ + L K+SSL + +G     A+L   G     T  N T 
Sbjct: 188 AMVSIIIPQAVRIVIPPLTNELVLLFKDSSLVLFLGVTASQAELAKFGNDEAATFANPT- 246

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I +    YL +++ +     RL A+
Sbjct: 247 ----PIFVAGVTYLLITVPLGYLARRLEAR 272


>gi|293397048|ref|ZP_06641322.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291420519|gb|EFE93774.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 219

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 90  FTAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRETIRYVVMPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRMKI 218


>gi|289424103|ref|ZP_06425889.1| amino acid ABC transporter, permease protein [Peptostreptococcus
           anaerobius 653-L]
 gi|289155528|gb|EFD04207.1| amino acid ABC transporter, permease protein [Peptostreptococcus
           anaerobius 653-L]
          Length = 205

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 33/209 (15%)

Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           VFS  LG++++    R+S++        F+    +  PLL    FL +GLP L       
Sbjct: 17  VFSIPLGLLVA--QVRISKNKLARSVTSFYIWIMRGSPLLLQMMFLYYGLPLL-----NE 69

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L FDK  +                   IA +   AA+ AEI RSGL ++ RGQ EAA  
Sbjct: 70  NLVFDKMPIA-----------------VIAFTINYAAYYAEIFRSGLESIDRGQYEAAKV 112

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG       R +++PQ ++ ++PP++++++NL+K++SL   +G  DL  +     N+   
Sbjct: 113 LGFDKWTMNRRIIIPQVIKRVLPPVSNEFINLVKDTSLVSVLGLNDLFRIATAASNREAS 172

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   L    IYL L+ +I      L  K
Sbjct: 173 LMP-FLYAAIIYLVLTALITQLFASLEKK 200


>gi|57237730|ref|YP_178978.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter jejuni RM1221]
 gi|57166534|gb|AAW35313.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni RM1221]
 gi|315058341|gb|ADT72670.1| Putative amino acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 247

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 120/216 (55%), Gaps = 33/216 (15%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           + +L I D S V+ +G                 NAK ++ S+++ ++L+  A  +     
Sbjct: 25  IEILKIQDPSGVVSYGY--------------TENAKAYLKSYLITLLLTACAVIIGVI-- 68

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQ---FNFIGGSTVSPEFMS 268
              G +L +LY S F      TL  I  +Y  +    PV+ Q   F F+  + +   + +
Sbjct: 69  --IGFSLAILYFSKF-----KTLNFIIDEYIDIIRGTPVILQLMIFAFVIFTFIDNLYAA 121

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L 
Sbjct: 122 I-LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALA 180

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 181 NEFISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|325496746|gb|EGC94605.1| glutamine ABC transporter permease protein [Escherichia fergusonii
           ECD227]
          Length = 219

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|315927549|gb|EFV06882.1| binding-protein-dependent transport system inner membrane component
           family protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 143

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 77/114 (67%), Gaps = 10/114 (8%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 19  LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 78

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFIYLSLSI 379
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+      II   +  Y+S+ I
Sbjct: 79  FISLFKETSV---VGFISVIDI--TMQSQSLQAVLYNPKPIIFTGLVYYVSVKI 127


>gi|302186220|ref|ZP_07262893.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 220

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLCFGQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|298491369|ref|YP_003721546.1| polar amino acid ABC transporter inner membrane subunit ['Nostoc
           azollae' 0708]
 gi|298233287|gb|ADI64423.1| polar amino acid ABC transporter, inner membrane subunit ['Nostoc
           azollae' 0708]
          Length = 340

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 93/175 (53%), Gaps = 27/175 (15%)

Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V SF +G++L+L      F TR     + +  + LP++ I    +F    ++ + L  +L
Sbjct: 149 VLSFPIGVILALGRTSNLFLTRWFSILYIEIVRGLPIIGI----LFIAQVMLPLFLPTEL 204

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D+ + G    I G             L  ++AA++AE VR GL ++PRGQ EA+ ALG
Sbjct: 205 RLDRLIRG----IAG-------------LVLFSAAYMAENVRGGLQSIPRGQTEASKALG 247

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
                   L++LPQA+R++IP +  Q+++L K++SL   VG  +L  +  +I+ Q
Sbjct: 248 FNTPLVVILIILPQALRAVIPAIVGQFISLFKDTSLLSLVGLVELTGIARSILAQ 302


>gi|237806947|ref|YP_002891387.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237499208|gb|ACQ91801.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 262

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 15/174 (8%)

Query: 220 PLLY-ISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           PL Y ISTF      G P L+ + L YQ     P +G        T  P   S  IAL+ 
Sbjct: 91  PLAYGISTFYTSFFRGTPLLLQVLLIYQ---GLPQIGPI-----PTAIP---SGIIALAL 139

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+++EI RS ++A+PRGQ EAA+ALGL   +    V+LPQ+M+  IPP  + ++ +L
Sbjct: 140 CYGAYLSEIFRSAIVAIPRGQWEAAMALGLKKHQTFLKVILPQSMKVAIPPGMAMFIAML 199

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           K+SSL   +G  +++ +  +      + +E+++    IY  LS ++ L   RL 
Sbjct: 200 KDSSLVSVMGLWEIMFLAQSYGRSAYRYMEMLITAAVIYWILSFLLELIQARLE 253


>gi|324324461|gb|ADY19721.1| amino acid ABC transporter, permease protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 230

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSLPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLETYIIVGLYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|257069824|ref|YP_003156079.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560642|gb|ACU86489.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 322

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 1/114 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L     A++AEI+RSGL +V  GQ EA+ ALG+++ K  R +++PQAMR I+P
Sbjct: 157 FWAAVIGLGLNEGAYLAEIIRSGLNSVDTGQTEASKALGMSNGKILRRIIVPQAMRVIVP 216

Query: 326 PLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           PL ++ + +LK +SL +AV F  DL      I N+    I ++++    YL+++
Sbjct: 217 PLGNETIGMLKTTSLVLAVPFTLDLTFATNGIANKLFTPIPLLIVAALWYLAIT 270


>gi|212712949|ref|ZP_03321077.1| hypothetical protein PROVALCAL_04047 [Providencia alcalifaciens DSM
           30120]
 gi|212684427|gb|EEB43955.1| hypothetical protein PROVALCAL_04047 [Providencia alcalifaciens DSM
           30120]
          Length = 121

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/85 (43%), Positives = 58/85 (68%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+PP+TS+ LNL+KNS++
Sbjct: 1   MTEQVRAAIQSLPRGQRNAALAMGLTLPQTYRYVLLPNAYRVILPPMTSEMLNLVKNSAI 60

Query: 341 AVAVGFADLVSVGGTIINQTGQAIE 365
           A  +G  D+ +  G +++ +  A E
Sbjct: 61  ASTIGLVDMAAQAGKLLDYSAHAWE 85


>gi|319939707|ref|ZP_08014065.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV]
 gi|319811125|gb|EFW07434.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV]
          Length = 521

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLTFTV 491


>gi|306842007|ref|ZP_07474680.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306287848|gb|EFM59268.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 387

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 255 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 314

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 315 FIGLFKDTSLVYIIGMFDLLGI 336


>gi|225627245|ref|ZP_03785282.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225617250|gb|EEH14295.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
          Length = 387

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 255 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 314

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 315 FIGLFKDTSLVYIIGMFDLLGI 336


>gi|124026132|ref|YP_001015248.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           NATL1A]
 gi|123961200|gb|ABM75983.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Prochlorococcus marinus str.
           NATL1A]
          Length = 344

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 76/130 (58%), Gaps = 3/130 (2%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + + +A+IAE +R GL ++P  Q+EAA +LGL   +  + +L+PQA+R  +P LT+Q 
Sbjct: 214 AFTLFVSAYIAEDIRGGLQSIPNTQIEAANSLGLNQYQIIQFILIPQALRIALPALTNQS 273

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + L +N+SL   +G  +L+ +G +I+      GQ IE+ +    +Y  +  ++A+    L
Sbjct: 274 IGLFQNTSLMAILGLVELLGIGRSILANPEFIGQYIEVYVWLACVYWIVCTIMAVLARHL 333

Query: 389 NAKIALKEKK 398
             ++ + +  
Sbjct: 334 EQRMTINQAN 343


>gi|254243964|ref|ZP_04937286.1| hypothetical protein PA2G_04794 [Pseudomonas aeruginosa 2192]
 gi|126197342|gb|EAZ61405.1| hypothetical protein PA2G_04794 [Pseudomonas aeruginosa 2192]
          Length = 230

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 15/190 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L + L L   R SRH++ +   A+P  YI  F   G P L+      QL      L QF 
Sbjct: 33  LALALPLGIARASRHWYVR---AVPYAYI--FFFRGTPLLL------QLFIVYYGLAQFE 81

Query: 256 FIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +  S   P     Y    + ++ +TAA+IAEI+R  + +VP G++EAA ALG++ R+A 
Sbjct: 82  EVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEAARALGMSRRQAL 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LP+A+R  +P  +++ + +LK S++   V   D++ +  TII +T +++    +  
Sbjct: 142 WHIILPRAVRIGLPAYSNEVIVMLKASAVVYTVTLFDIMGMARTIIARTYESMLFFCLAG 201

Query: 372 FIYLSLSIMI 381
            +YL ++I++
Sbjct: 202 ALYLVITIVL 211


>gi|224371143|ref|YP_002605307.1| ABC-type amino acid transport system, permease protein
           [Desulfobacterium autotrophicum HRM2]
 gi|223693860|gb|ACN17143.1| ABC-type amino acid transport system, permease protein
           [Desulfobacterium autotrophicum HRM2]
          Length = 293

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 80/140 (57%), Gaps = 2/140 (1%)

Query: 237 LIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L  L   ++ ++ +L QF   F+   ++ P F S   +L+ Y  A+  EI+R+G+ ++ +
Sbjct: 132 LTGLDRAVNMNEGLLRQFLTTFVSDPSLLPVFFSATASLALYEGAYFTEIIRAGIESIEK 191

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA+ +LG T  +  R V+LPQA+R ++PP+  Q ++ +K+SS+   +   +L   G 
Sbjct: 192 GQWEASSSLGFTRFQQLRHVILPQALRRMLPPMAGQIISTIKDSSIVSVISIQELTFQGM 251

Query: 355 TIINQTGQAIEIILIWMFIY 374
            +++ T    E+ L  + +Y
Sbjct: 252 ELMSATFLTFEVWLTILALY 271



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F   + A +IGT++GA +   +  +  +   YVE  RNIP +V IF  
Sbjct: 62  ILTGLFITLRISFWATLSALVIGTIMGAMKSGRSHYLKMVATAYVETIRNIPVIVWIFIF 121

Query: 149 Y 149
           Y
Sbjct: 122 Y 122


>gi|116248748|ref|YP_764589.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253398|emb|CAK11786.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 229

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 24/178 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +  F+ F LP       +  L  DK                   S  + LS Y
Sbjct: 74  RNLPILVLVLFVFFALP-------QMGLRLDK-----------------IKSFVLVLSLY 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AE+ R+GL+++PRG  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K
Sbjct: 110 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SLA A+   +L      I  ++ + IE  ++   +Y++   +IA  M  +  ++AL
Sbjct: 170 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAAVMRFVERRLAL 227


>gi|326793192|ref|YP_004311013.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326543956|gb|ADZ85815.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 224

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 66/106 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +A S   AA+ AEI R+G+ ++ +GQ E A  LGL+ +     ++LPQA + +
Sbjct: 93  PRMPAALLAFSLNYAAYFAEIFRAGISSIDQGQYEGAEVLGLSKQDTFFRIILPQAFKRV 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +PP+ ++ + L+K+++L  AVGF DL+ +G T  N+    + ++L+
Sbjct: 153 LPPIANEVITLVKDTALVYAVGFDDLLKIGKTATNRDASLLPLVLV 198


>gi|256369177|ref|YP_003106685.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|255999337|gb|ACU47736.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
          Length = 385

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|225175910|ref|ZP_03729902.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
 gi|225168498|gb|EEG77300.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
          Length = 225

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 79/128 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL  + AA++AEI R  + ++ RGQ EAA++LG+T  +A + ++LPQA +  +PPL +Q
Sbjct: 97  IALGIHNAAYLAEIFRGAIQSIDRGQREAAMSLGMTSWQAMKRIILPQAFKRAVPPLGNQ 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSLA  +   +L+S      +     +E+++I    YL ++ ++ + +N +  
Sbjct: 157 FIIALKDSSLASVIAVPELLSRARQFGSSNFLYMEMLVIAGIYYLIMTSVLTVVVNHVEE 216

Query: 391 KIALKEKK 398
           ++ + E +
Sbjct: 217 RLRVSEYR 224


>gi|260655293|ref|ZP_05860781.1| amino acid ABC transporter, permease/substrate-binding protein
           [Jonquetella anthropi E3_33 E1]
 gi|260629741|gb|EEX47935.1| amino acid ABC transporter, permease/substrate-binding protein
           [Jonquetella anthropi E3_33 E1]
          Length = 217

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 117/239 (48%), Gaps = 29/239 (12%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D S++LP+     N  L           K  +F  ++G    LF     R       + L
Sbjct: 4   DFSVLLPYWHLFLNGAL--------VTVKASLFGVLIGTAGGLFVGAF-RVLPFAPLRWL 54

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             LYIS  ++ G P +V + L Y   F  P LG  N          F++  + +   ++A
Sbjct: 55  AWLYIS--VLRGTPLMVQLFLIY---FGLPELG-VNL-------DAFLAGVLGIGINSSA 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EIVR G+ ++PRGQ EAA  LGL++ ++   +++PQA+RS++P + ++++ L+K SS
Sbjct: 102 YVGEIVRGGIESIPRGQWEAAKVLGLSYWQSLWTIIMPQAVRSMLPAIGNEFVALIKESS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L   +  +DL   G  + + T  + E  ++   +YL L+       +     ++L EKK
Sbjct: 162 LLSVLAISDLTQAGQQVRSVTYASFESFIVVGLVYLFLT-------SAATGALSLLEKK 213


>gi|49476791|ref|YP_034685.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|218901559|ref|YP_002449393.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus AH820]
 gi|228913104|ref|ZP_04076743.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|49328347|gb|AAT58993.1| amino acid ABC transporter, permease [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|218536304|gb|ACK88702.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus AH820]
 gi|228846509|gb|EEM91522.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 230

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|254701521|ref|ZP_05163349.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 5 str. 513]
 gi|254709862|ref|ZP_05171673.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis B2/94]
 gi|256031354|ref|ZP_05444968.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis M292/94/1]
 gi|256060864|ref|ZP_05451024.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           neotomae 5K33]
 gi|256159476|ref|ZP_05457244.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M490/95/1]
 gi|256254762|ref|ZP_05460298.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti B1/94]
 gi|260168488|ref|ZP_05755299.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261221941|ref|ZP_05936222.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261317403|ref|ZP_05956600.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261324861|ref|ZP_05964058.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261752069|ref|ZP_05995778.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261757956|ref|ZP_06001665.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|265988440|ref|ZP_06100997.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|265997904|ref|ZP_06110461.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|294852108|ref|ZP_06792781.1| general L-amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|260920525|gb|EEX87178.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261296626|gb|EEY00123.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261300841|gb|EEY04338.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261737940|gb|EEY25936.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|261741822|gb|EEY29748.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|262552372|gb|EEZ08362.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|264660637|gb|EEZ30898.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|294820697|gb|EFG37696.1| general L-amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 385

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|242237844|ref|YP_002986025.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242129901|gb|ACS84203.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 326

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 69/104 (66%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   AA++AEI+R+GL++V +GQ+E   A G++  +A R +++PQAMR+IIPP  +Q 
Sbjct: 168 GLALNEAAYMAEIIRAGLLSVDQGQIETTQAFGMSRVRALRRIIIPQAMRAIIPPTGNQL 227

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++++K +SL   +   DL+     I N+T + I ++++ +  YL
Sbjct: 228 ISMIKATSLVSVIAMGDLLYSVQAIYNRTFEIIPMLMVAVIWYL 271


>gi|90578868|ref|ZP_01234678.1| Putative arginine ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90439701|gb|EAS64882.1| Putative arginine ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 220

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 81/135 (60%), Gaps = 1/135 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  IALS   A++ A+ +R  + AVP+GQ EAA ALG++  +    +++PQA+R
Sbjct: 72  ISP-FLSGVIALSLIFASYAAQTIRGAIKAVPKGQREAASALGISKARTFVAIIIPQAIR 130

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T ++         +YL ++++ 
Sbjct: 131 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLSSAATHESFTWYATAAAVYLVITLIT 190

Query: 382 ALFMNRLNAKIALKE 396
              + R++AK +++E
Sbjct: 191 QQIIKRIDAKYSVQE 205


>gi|82543614|ref|YP_407561.1| transport system permease protein [Shigella boydii Sb227]
 gi|81245025|gb|ABB65733.1| putative transport system permease protein [Shigella boydii Sb227]
 gi|320184747|gb|EFW59539.1| Cystine ABC transporter, permease protein [Shigella flexneri CDC
           796-83]
 gi|332096720|gb|EGJ01711.1| L-cystine transport system permease protein tcyB [Shigella boydii
           3594-74]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P  +S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-ILSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220


>gi|72382451|ref|YP_291806.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Prochlorococcus marinus str.
           NATL2A]
 gi|72002301|gb|AAZ58103.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Prochlorococcus marinus str. NATL2A]
          Length = 344

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 76/130 (58%), Gaps = 3/130 (2%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + + +A+IAE +R GL ++P  Q+EAA +LGL   +  + +L+PQA+R  +P LT+Q 
Sbjct: 214 AFTLFVSAYIAEDIRGGLQSIPNTQIEAANSLGLNQYQIIQFILIPQALRIALPALTNQS 273

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + L +N+SL   +G  +L+ +G +I+      GQ IE+ +    +Y  +  ++A+    L
Sbjct: 274 IGLFQNTSLMAILGLVELLGIGRSILANPEFIGQYIEVYVWLACVYWIVCTIMAVLARHL 333

Query: 389 NAKIALKEKK 398
             ++ + +  
Sbjct: 334 EQRMTINQAN 343


>gi|312958351|ref|ZP_07772872.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311287415|gb|EFQ65975.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 221

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 72/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  +  R  +LPQAMR+ +PPL + 
Sbjct: 93  IGFSLNMAAYACEILRAAIASIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      +  +T +   + L    IY  L+ ++A F NRL  
Sbjct: 153 FISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSAALIYWVLASILAYFQNRLED 212

Query: 391 KI 392
           ++
Sbjct: 213 RV 214


>gi|253687971|ref|YP_003017161.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754549|gb|ACT12625.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 219

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 90  FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRRATLRHVIAPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLILSFIL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRLKI 218


>gi|227903012|ref|ZP_04020817.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
 gi|227869255|gb|EEJ76676.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
          Length = 562

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 73/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++
Sbjct: 416 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNE 475

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N
Sbjct: 476 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 531



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E        T+   Y   I+ G   T  LA  G I    IG LVG           
Sbjct: 305 KAGNETKNENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 364

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A   V W+  VYVE+FR  P +V    +Y
Sbjct: 365 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 397


>gi|172064905|ref|YP_001815617.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171997147|gb|ACB68064.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 248

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S V P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFVWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAALIYLGLNFIVVRLLGALEWRLS 224


>gi|269139653|ref|YP_003296354.1| glutamine ABC transporter permease component [Edwardsiella tarda
           EIB202]
 gi|267985314|gb|ACY85143.1| glutamine ABC transporter permease component [Edwardsiella tarda
           EIB202]
 gi|304559523|gb|ADM42187.1| Glutamine transport system permease protein GlnP [Edwardsiella
           tarda FL6-60]
          Length = 218

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 12/187 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R F       + L++I   LI G P +V +   Y   F  P++          + P F 
Sbjct: 43  ARAFGGWLSNHIALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLR------IDP-FS 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V++P A+R ++PPL
Sbjct: 91  AAVITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRYVIMPLALRRMLPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + R
Sbjct: 151 GNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLRR 210

Query: 388 LNAKIAL 394
           L  ++ +
Sbjct: 211 LEKRLKI 217


>gi|187929543|ref|YP_001900030.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|241663662|ref|YP_002982022.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|309781682|ref|ZP_07676415.1| glutamine ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|187726433|gb|ACD27598.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|240865689|gb|ACS63350.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|308919323|gb|EFP64987.1| glutamine ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 230

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 64/92 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++  AL  +  A++AEIVR+G+  +PRGQME+A +LGL++ +A R V+LPQA+R+++
Sbjct: 94  QFSTMLTALVIFDGAYLAEIVRAGIQGLPRGQMESARSLGLSYMQAMRRVILPQALRNML 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           P L +Q ++ +K +SL   +   ++  V G I
Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEVSFVAGQI 185


>gi|75906961|ref|YP_321257.1| amino acid ABC transporter permease [Anabaena variabilis ATCC
           29413]
 gi|75700686|gb|ABA20362.1| neutral amino acid ABC transporter membrane protein / L-glutamate
           ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Anabaena variabilis ATCC
           29413]
          Length = 381

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 8/111 (7%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  ++AA++AE VR GL AV RGQ+EAA ALGL       L++LPQA+R++IP +  Q+
Sbjct: 256 GLVLFSAAYMAENVRGGLQAVSRGQVEAAKALGLNTFFVVLLIVLPQALRAVIPAVVGQF 315

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILI-----WMFIY 374
           + L K++SL   VG  +L  +  +I+ Q    G+  E+ L      W+F Y
Sbjct: 316 IGLFKDTSLLSLVGLVELTGIARSILAQPQFIGRYAEVYLFIGLIYWLFCY 366


>gi|330830031|ref|YP_004392983.1| amino acid ABC transporter permease [Aeromonas veronii B565]
 gi|328805167|gb|AEB50366.1| ABC-type amino acid transporter, permease protein [Aeromonas
           veronii B565]
          Length = 265

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 62/90 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++LS Y  AF AE++R+G+ A+P+GQ EAA +LGL+     R V+LPQ +R  +PPLT++
Sbjct: 137 LSLSLYQGAFTAEVLRAGVQAIPKGQWEAAQSLGLSRAITLRKVILPQLVRITLPPLTNE 196

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++L+K+S+L   +   DL + G T++  T
Sbjct: 197 LVSLIKHSALVSVIAIFDLTNEGRTLVADT 226


>gi|259046648|ref|ZP_05737049.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
 gi|259036813|gb|EEW38068.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
          Length = 219

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 99/193 (51%), Gaps = 28/193 (14%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHF 246
           FVF  +LG +L L   R SR           L +I+TF    + G PTLV + L   L+F
Sbjct: 33  FVFGTILGFILVL--MRRSRFRF--------LRWIATFHVSFMRGTPTLVFLFL---LYF 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L            P  +   +  S  ++A+I+E++RS + AV  GQ EAA++LG++
Sbjct: 80  GLPFL--------KITLPALVCALLCFSIASSAYISEVLRSAMDAVDNGQWEAAMSLGMS 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQ 362
           +R+  + V++PQA R  IPPL++  L+++K SSL   +   D+      VGG   N    
Sbjct: 132 YRQTLQKVIVPQAFRIAIPPLSNVLLDMIKGSSLVAMISLPDIFQNAKIVGGREQNYMTV 191

Query: 363 AIEIILIWMFIYL 375
            I + +I+  I L
Sbjct: 192 YILVAIIYWIICL 204


>gi|254718863|ref|ZP_05180674.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           sp. 83/13]
 gi|265983848|ref|ZP_06096583.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306837634|ref|ZP_07470504.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|264662440|gb|EEZ32701.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306407283|gb|EFM63492.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 385

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|296129396|ref|YP_003636646.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
 gi|296021211|gb|ADG74447.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
          Length = 218

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 74/124 (59%), Gaps = 1/124 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YT+AF+AE VRSG+ AV  GQ EAA A+GLT  ++   V+LPQA+R++IPPL + 
Sbjct: 92  VCLTAYTSAFVAEAVRSGINAVGVGQAEAARAIGLTFGQSLTTVILPQAVRTVIPPLINV 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + L KN+S+A      +LV+ G  +  Q     + +++     YL +++      N L 
Sbjct: 152 IIALTKNTSVAAGFAVVELVASGRRLAQQNPADVVLVLVGVALFYLVVTVPAGQLANLLE 211

Query: 390 AKIA 393
            K+A
Sbjct: 212 RKVA 215


>gi|226306802|ref|YP_002766762.1| amino acid ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|226185919|dbj|BAH34023.1| putative amino acid ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
          Length = 316

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 63/99 (63%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P + QF  I    +   F+   I L+   AA++AEIVR+G+ +V  GQ EA++ALG+T  
Sbjct: 134 PFVHQFAHINLQDLQAAFLFAVIGLALNEAAYMAEIVRAGVSSVNEGQTEASVALGMTWS 193

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           +  R  +LPQAMR IIPP  ++ +++LK +SL  AV ++
Sbjct: 194 QTMRRTVLPQAMRVIIPPTGNEVISMLKTTSLVTAVPYS 232


>gi|311068998|ref|YP_003973921.1| high affinity arginine ABC transporter permease [Bacillus
           atrophaeus 1942]
 gi|310869515|gb|ADP32990.1| high affinity arginine ABC transporter permease [Bacillus
           atrophaeus 1942]
          Length = 219

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V   +LGIVLSL      R       F+    +  PL+     + FGLP L    L +Q+
Sbjct: 31  VIGLILGIVLSLCKISTFRPLIWIADFYTSVFRGTPLVLQLMIVYFGLPQL----LGFQI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                               +F +   ALS  +AA+++EI+R+G+ A+ +GQ EAA+ALG
Sbjct: 87  D-------------------QFWAAVAALSLNSAAYVSEIIRAGINAIDKGQKEAAVALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           + + K  + +LLPQA ++I P + ++ + L K S++   +G  D++
Sbjct: 128 VPYSKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVIGLGDIM 173


>gi|229028210|ref|ZP_04184350.1| Amino acid ABC transproter, permease [Bacillus cereus AH1271]
 gi|228733084|gb|EEL83926.1| Amino acid ABC transproter, permease [Bacillus cereus AH1271]
          Length = 230

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 21/224 (9%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGL 232
           ++PTL   T    ++ + S VLG ++ L     R+S +   K   ++  +YI+  +I G 
Sbjct: 8   TYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFFRISSN---KILNSIAHVYIA--IIRGT 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V
Sbjct: 63  PLIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSV 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   
Sbjct: 111 DRGQLEAARSLGMPYPLAMRRIILPQAFRQSLPPLGNQFIIGLKDSSLVAYVGLSELWGS 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 171 GLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T +L   + T  L  + ++  ++IG L    R+S+NK++  I  VY+ + R  P +
Sbjct: 7   STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISSNKILNSIAHVYIAIIRGTPLI 65

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 66  VQIAILYFGITSVV 79


>gi|23501631|ref|NP_697758.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|161618714|ref|YP_001592601.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|254704070|ref|ZP_05165898.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|260566682|ref|ZP_05837152.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261754728|ref|ZP_05998437.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|23347548|gb|AAN29673.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|161335525|gb|ABX61830.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|260156200|gb|EEW91280.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261744481|gb|EEY32407.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
          Length = 385

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|90424050|ref|YP_532420.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           BisB18]
 gi|90106064|gb|ABD88101.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris
           BisB18]
          Length = 499

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      + + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T LV+
Sbjct: 352 FLPGNFTVDGLVRVLIGIALFAGAYNAEVIRGGLQAIPRGQAEAASALGLSYWKITGLVV 411

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PQA+R +IP L + ++ L K++SL   V   DL+ 
Sbjct: 412 MPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 447


>gi|296877228|ref|ZP_06901268.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431748|gb|EFH17555.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 228

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 15/209 (7%)

Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------H 245
           V+ I+LS F      L + +  K  ++  ++Y++   I   P ++LI   Y L       
Sbjct: 25  VVSILLSFFPALFLALGQIYKVKGVRSFSVIYLA--FIRATPPILLILFFYSLFPSLLNS 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F K +   FN      ++P + + +I  S  T   +AEI+RS ++ V +GQ+EAA A+GL
Sbjct: 83  FFKSIGSHFNVF---EINPIYYA-FIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAIGL 138

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+R+A   ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     +   Q  E
Sbjct: 139 TNRQAYIRIVFPQALRSALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQYFE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             L+   +Y+ +  +I    NRL  ++ L
Sbjct: 199 SYLVIFILYIVICGVIQWGFNRLEKRLTL 227


>gi|283954462|ref|ZP_06371982.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 414]
 gi|283794079|gb|EFC32828.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 414]
          Length = 247

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  +V +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVVDI--TMQSQSLQAV 211


>gi|316934240|ref|YP_004109222.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris DX-1]
 gi|315601954|gb|ADU44489.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris DX-1]
          Length = 501

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      + + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T L++
Sbjct: 354 FLPGNFTIDNLVRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKTTGLIV 413

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA+R +IP L + ++ L K++SL   V   DL+ 
Sbjct: 414 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 449


>gi|229089484|ref|ZP_04220754.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-42]
 gi|228693870|gb|EEL47563.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-42]
          Length = 196

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/131 (38%), Positives = 76/131 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IP
Sbjct: 50  FWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIP 109

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +
Sbjct: 110 PLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLV 169

Query: 386 NRLNAKIALKE 396
           N L  ++  KE
Sbjct: 170 NLLEKRLQRKE 180


>gi|163843977|ref|YP_001628381.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163674700|gb|ABY38811.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 240

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL +IS+  I     +  I + Y   +  P +G           PE +   IAL+ + ++
Sbjct: 50  PLRWISSAYIEWFRNIPFIVVLYLFFYRLPFMG--------VRLPESIVGTIALAFFASS 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S
Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +   +  A+L   G  I  +T    EI L    IY  ++ + A  M+R
Sbjct: 162 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209


>gi|163751503|ref|ZP_02158726.1| amino acid ABC transporter, permease protein [Shewanella benthica
           KT99]
 gi|161328624|gb|EDP99774.1| amino acid ABC transporter, permease protein [Shewanella benthica
           KT99]
          Length = 225

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 77/122 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+ R+  + V+LPQA+++I+P L ++
Sbjct: 100 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQRQTMQEVILPQAIKNILPALGNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK +++   +G  DL+  G  I ++T +A   +     IYL L+      +++L  
Sbjct: 160 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEAEVPLFTCALIYLVLTYGFTFMLSKLEL 219

Query: 391 KI 392
           ++
Sbjct: 220 RL 221


>gi|119964343|ref|YP_948457.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119951202|gb|ABM10113.1| putative amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opine family [Arthrobacter aurescens
           TC1]
          Length = 254

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 114/214 (53%), Gaps = 14/214 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + V GI+ +     L+     +   A  +  I T ++ GLP  VL  L     F  P+
Sbjct: 34  VLAVVSGIIGTALGMLLALMGISRNAAARWVARIYTDILRGLPP-VLTILVIGFGFG-PI 91

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + +     GST SP  M++  ALS  + A+I EI RSG+ +V +GQ+EA  ALG ++  +
Sbjct: 92  IRELT---GST-SPYPMAIA-ALSLMSGAYIGEIFRSGIQSVDKGQLEATRALGFSYGSS 146

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEI 366
            RLV++PQ +R ++P L +Q++ L+K SSL   +G      ++  +G      +G     
Sbjct: 147 MRLVVVPQGIRRVLPALVNQFIALIKESSLVFMLGLLATEREIFQIGKDAAANSGNLSPY 206

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI--ALKEKK 398
           +   +F YL+L+I +  F+N ++A++     EKK
Sbjct: 207 VAAAIF-YLALTIPLTHFVNWIDARMRAGRPEKK 239



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           VG  NT  LA    I  T +G L+    +S N    W+ R+Y ++ R +PP++ I  +
Sbjct: 27  VGLPNTIVLAVVSGIIGTALGMLLALMGISRNAAARWVARIYTDILRGLPPVLTILVI 84


>gi|160896813|ref|YP_001562395.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160362397|gb|ABX34010.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 223

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E +S  I    + AA+ +EI+R+G+ ++PRGQ+ A  A+G+T+ +  RLV+LPQ
Sbjct: 87  GRPIGAE-VSAIITFIAFEAAYFSEIMRAGIQSIPRGQVSAGQAMGMTYGQNMRLVVLPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  D++          G+ IE  L     Y  L 
Sbjct: 146 AFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEVAGKNYGRPIESYLAAGVTYFVLC 205

Query: 379 IMIALFMNRLNAKIAL 394
             ++  + RL+ KIA+
Sbjct: 206 YSLSWAVKRLHKKIAI 221


>gi|116514276|ref|YP_813182.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093591|gb|ABJ58744.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 500

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 75/131 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+  K  R V+ PQA+++I
Sbjct: 365 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQTKTYRYVVFPQALKNI 424

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ L K+SSL   +G  +L+   G +   T + +  + I M IY  ++ +   
Sbjct: 425 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFIFTR 484

Query: 384 FMNRLNAKIAL 394
            +N    ++ L
Sbjct: 485 LLNYFERRMNL 495



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            +N   NN +K +L     ++   A            S S YA+    G   T  +    
Sbjct: 250 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYASYFATGLGYTMIITICS 308

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +    ++G +    RLS NKL+  I   Y+E  R  P +V I F+Y
Sbjct: 309 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 354


>gi|73661552|ref|YP_300333.1| ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494067|dbj|BAE17388.1| ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 239

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 114/201 (56%), Gaps = 10/201 (4%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG+V++L  T L R    +  + +   YIS  +I G P +V +   + + +  
Sbjct: 34  ITLVTFLLGLVIALL-TALMRISTSRILRGIARFYIS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    N     T++P   ++ I LS    A+ +EI+R G++++P+GQ EAA ++G+
Sbjct: 88  PELGRLLTNNSENQWTLAPVIAAI-IGLSLNVGAYASEIIRGGIMSIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +R+  + ++LPQA+R  +P L + +L+L+K++SL   +  A++      + + T + + 
Sbjct: 147 NYRQTIQRIILPQAIRVSVPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLT 206

Query: 366 IILIWMFIYLSLSIMIALFMN 386
           I L+   +Y  +  +I++  N
Sbjct: 207 IYLLVALMYWVVCFIISIAQN 227


>gi|163760313|ref|ZP_02167396.1| amino acid ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
 gi|162282712|gb|EDQ33000.1| amino acid ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
          Length = 377

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 61/82 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ +++A++AE++R GL A+P+GQ EAA A+ LT  + TRLV++PQA++ +IP + + 
Sbjct: 245 IGVALFSSAYMAEVIRGGLQAIPKGQYEAANAMALTFWQGTRLVIMPQALKLVIPGIVNT 304

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL + +G  DL+ +
Sbjct: 305 FIGLFKDTSLVLIIGLFDLLGI 326


>gi|283956246|ref|ZP_06373726.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791966|gb|EFC30755.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 1336]
          Length = 247

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  +V +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVVDI--TMQSQSLQAV 211


>gi|126652698|ref|ZP_01724859.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905]
 gi|126590547|gb|EAZ84665.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905]
          Length = 235

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 13/190 (6%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +F+    +  P++     + FGLP LV ++A  + L F             S+  P    
Sbjct: 56  NFYVSFFRGTPIIMHIMLVYFGLPMLVDVVANTFHLSFQ------------SSSIPILFF 103

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + +AL+    A+ +EI+RSG+++VP+GQ+EAA A+GLT  +A R  +LPQA    IP  T
Sbjct: 104 VILALTFSAGAYSSEIIRSGILSVPKGQLEAAYAIGLTFTQAMRRYILPQAFGKSIPNFT 163

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + ++  L  +SLA  +   +L  V   + +   + +E  +    IY  +SI+     +R+
Sbjct: 164 NVFIGFLHATSLAFFLSIKELTGVANIVASVNLKFLEAFIAVGIIYWGISIITEWISHRI 223

Query: 389 NAKIALKEKK 398
             ++    K 
Sbjct: 224 EKRVTAYSKS 233


>gi|116617557|ref|YP_817928.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096404|gb|ABJ61555.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 480

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP ++                        T  P F +  I L   
Sbjct: 326 RGLPLMVLAFFIYIGLPGVI-----------------------GTKIPAFTAGLITLILN 362

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    VR G  AV +GQMEAA +LG T+ ++ R V++PQ ++ ++P   +Q++  LK
Sbjct: 363 EGAYTGAFVRGGFEAVDKGQMEAARSLGFTYNRSMRKVIMPQGLKIMVPSFINQFIITLK 422

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+  A+G  +L   G  I+++  Q   +  I   IYL
Sbjct: 423 DTSILSAIGILELTQTGTLIVSRNSQGFRVWAIVAVIYL 461


>gi|89053120|ref|YP_508571.1| amino acid ABC transporter permease [Jannaschia sp. CCS1]
 gi|88862669|gb|ABD53546.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-asparagine ABC
           transporter membrane protein [Jannaschia sp. CCS1]
          Length = 445

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 77/132 (58%), Gaps = 7/132 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ ++AA+IAE++R GL A+PRGQ E A +LGL + ++ +L++LPQA++  IP + S 
Sbjct: 316 IMVTLFSAAYIAEVIRGGLAALPRGQYEGADSLGLNYWQSMQLIVLPQALKISIPGIVSS 375

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF-MNR-- 387
           ++ L K+++L V +G  D +     I   T      I   +FI++ L   I  F M+R  
Sbjct: 376 FIGLFKDTTLVVFIGLFDPIGFSNAIRADTDW--NGIYWELFIFIGLCFFICCFGMSRYS 433

Query: 388 --LNAKIALKEK 397
             L  K+A   +
Sbjct: 434 QWLERKLATDHR 445


>gi|312961013|ref|ZP_07775518.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas fluorescens WH6]
 gi|311284671|gb|EFQ63247.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas fluorescens WH6]
          Length = 258

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 73/127 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A++AEI+R+G+ AV +GQ EA  +LG+   K  R ++LPQA R I+PPL ++
Sbjct: 109 IALGLNEGAYMAEIIRAGIGAVDKGQYEAGRSLGMGFGKLMRRIVLPQAFRVIVPPLGNE 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +  +LKN++L   +G  +L+     + + T +  E+ L+    +L+L+ +   F   L  
Sbjct: 169 FNVMLKNTTLVSVIGVQELLLSTQMVTSATFRVFELYLVVAIYFLTLTTLWGFFQRWLEN 228

Query: 391 KIALKEK 397
           +    ++
Sbjct: 229 RFGQSDR 235


>gi|294498359|ref|YP_003562059.1| putative amino acid ABC transporter permease [Bacillus megaterium
           QM B1551]
 gi|294348296|gb|ADE68625.1| putative amino acid ABC transporter, permease protein [Bacillus
           megaterium QM B1551]
          Length = 241

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 20/216 (9%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + S  LG +  LF   + R +     K + ++Y+S   + G P LV +   Y   +  
Sbjct: 26  ISIISMALGSIFGLFIA-VCRIYKIPLLKQIAVIYVS--FMRGTPLLVQL---YVFFYGI 79

Query: 249 PVLGQF------NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           P+  +F        +GG T+SP   +L IA +  T+A+ +E+ RS +  + RGQ EAA +
Sbjct: 80  PIFIEFLNETQGWHLGGDTISPLIYAL-IAYTLNTSAYQSEVFRSSIQTIDRGQFEAAYS 138

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+T  +A + ++ PQ++ + IP L + +++L+K +SLA AV   +++++   I N   +
Sbjct: 139 IGMTTFQAIKRIIFPQSLVAAIPNLGNIFISLIKATSLAFAVKVVEIMAISKVIANDGYR 198

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +E+ L+   IY     ++  F  RL   I   EKK
Sbjct: 199 YLEMYLVASLIYW----ILCFFFERLFVVI---EKK 227


>gi|157363724|ref|YP_001470491.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157314328|gb|ABV33427.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 202

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 100/187 (53%), Gaps = 27/187 (14%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A RL   F+EK  +++PLL +   + +GLP +                       G  + 
Sbjct: 26  AARLLSSFYEKILRSIPLLVLLMLIFYGLPEI-----------------------GIRLD 62

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  + L   ++A+ ++I R  +++V +GQ  AA+++G+T  +  R ++ PQA+R  
Sbjct: 63  P-FLACVLGLGLRSSAYQSQIFRGAILSVGKGQTLAAMSIGMTKIQIFRYIVFPQALRFS 121

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM--- 380
           I P T++   +LK+SS+A A+G  +L+  G  II+ T + + I +    IYL ++++   
Sbjct: 122 IAPWTNELTIVLKDSSMAYALGVVELLRQGSYIISTTYEPMVIFITCAVIYLIMTLLANR 181

Query: 381 IALFMNR 387
           + +F+ R
Sbjct: 182 VMMFLER 188


>gi|104774186|ref|YP_619166.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103423267|emb|CAI98100.1| Amino Acid ABC transporter, substrate binding /permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 493

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 75/131 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+  K  R V+ PQA+++I
Sbjct: 358 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQALKNI 417

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ L K+SSL   +G  +L+   G +   T + +  + I M IY  ++ +   
Sbjct: 418 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFIFTR 477

Query: 384 FMNRLNAKIAL 394
            +N    ++ L
Sbjct: 478 LLNYFERRMNL 488



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            +N   NN +K +L     ++   A            S S YA+    G   T  +    
Sbjct: 243 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYASYFATGLGYTMIITICS 301

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +    ++G +    RLS NKL+  I   Y+E  R  P +V I F+Y
Sbjct: 302 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 347


>gi|294675894|ref|YP_003576509.1| glutamate/aspartate ABC transporter permease BztC [Rhodobacter
           capsulatus SB 1003]
 gi|3182936|sp|Q52665|BZTC_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine transport
           system permease protein BztC
 gi|1655714|gb|AAB17888.1| BztC [Rhodobacter capsulatus SB 1003]
 gi|294474714|gb|ADE84102.1| glutamate/aspartate ABC transporter, permease protein BztC
           [Rhodobacter capsulatus SB 1003]
          Length = 434

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 56/78 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + +A RL+++PQA++  IP + S 
Sbjct: 304 ILVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWQAQRLIIMPQALKISIPGIVSS 363

Query: 331 YLNLLKNSSLAVAVGFAD 348
           ++ L K+++L   VG  D
Sbjct: 364 FIGLFKDTTLVAFVGLFD 381


>gi|300173515|ref|YP_003772681.1| amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811]
 gi|299887894|emb|CBL91862.1| Amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811]
          Length = 491

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 109/203 (53%), Gaps = 18/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   VLG VL+LF  +LS +F  K+   L  +YI    + G P LV     + + F   V
Sbjct: 303 VIGAVLGTVLALF--KLSPNFILKS---LGNIYIE--YVRGTPLLVQ---AFMVFFGTQV 352

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G  N          F +  +A+   +AA++AEI+RSG+ +V  GQ EAA +LGL+  K+
Sbjct: 353 IG-LNL-------SAFAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLSKGKS 404

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA+++I+P L ++++ ++K  S+   +G  +L+   G +   + Q    +LI 
Sbjct: 405 MRYIILPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTGVVQGASFQPFFPLLIT 464

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IY  L+  I+  +     ++A
Sbjct: 465 SLIYFVLTFSISRALGYAEKRMA 487


>gi|283832682|ref|ZP_06352423.1| L-cystine ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
 gi|291072357|gb|EFE10466.1| L-cystine ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 107/207 (51%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG +L+L   RLS          LP+ +++ F I       LIA  + +++  P  
Sbjct: 32  FGLVLGFILALM--RLS--------PLLPVRWLARFYISVFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ AE +R+ + ++ +GQ EA  ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAISSIDKGQWEAGASIGMTRWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +EK+
Sbjct: 194 LIYWVMATVLSALQNYFEEQLNRQEKE 220



 Score = 39.7 bits (91), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   RLS    V W+ R Y+ VFR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFILALMRLSPLLPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107


>gi|187731045|ref|YP_001879707.1| L-cystine ABC transporter permease [Shigella boydii CDC 3083-94]
 gi|187428037|gb|ACD07311.1| L-cystine ABC transporter, permease protein [Shigella boydii CDC
           3083-94]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R ++PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVVLPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|306823388|ref|ZP_07456763.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Bifidobacterium dentium ATCC 27679]
 gi|309802620|ref|ZP_07696724.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|304553095|gb|EFM41007.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Bifidobacterium dentium ATCC 27679]
 gi|308220684|gb|EFO76992.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 327

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  +   +V   F + ++ L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSVDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++  
Sbjct: 204 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLN 389
             YL ++ ++ +  +RL 
Sbjct: 264 IWYLVITSILMIIQSRLE 281


>gi|260429908|ref|ZP_05783883.1| ABC polar amino acid family transporter, inner membrane subunit
           [Citreicella sp. SE45]
 gi|260418831|gb|EEX12086.1| ABC polar amino acid family transporter, inner membrane subunit
           [Citreicella sp. SE45]
          Length = 296

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 96/174 (55%), Gaps = 23/174 (13%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF--MSLYIALSCYTAA--------- 279
           G P LV +   Y L    P +      GG    P+   +S  +A+S +TAA         
Sbjct: 115 GTPVLVQLVFWYNLAAIFPDVSLGIPFGG----PKLFEISATVAISSFTAALLGLGFNEG 170

Query: 280 -FIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT--RLVLLPQAMRSIIPPLTSQYLNLLK 336
            ++AEI+R+GL +V  GQ EA+ ALG  HR A   R+++LPQAM++IIPP  +Q + +LK
Sbjct: 171 AYMAEIIRAGLTSVDHGQTEASRALG--HRPAQTFRVIVLPQAMKAIIPPTGNQVIGMLK 228

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387
            +SLA  V   +L+    TI ++T Q + ++++   W  I +S+  ++  ++ R
Sbjct: 229 YTSLASVVALGELMHSVETIYSRTFQTMPMLIVAALWYLILVSILSVVQYYIER 282



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T WL    M+  T+IG +V   RLS ++++      +V  FR  P LV + F 
Sbjct: 66  VLRGVGMTLWLTLLVMVMGTVIGIIVAVMRLSNDRILNGTAVAFVWFFRGTPVLVQLVFW 125

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y   L+ +  PD S+ +PFG
Sbjct: 126 YN--LAAI-FPDVSLGIPFG 142


>gi|121610412|ref|YP_998219.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121555052|gb|ABM59201.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 231

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 84/149 (56%), Gaps = 15/149 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL  + F  FG   L+ +A+K  ++         + I G+T          AL  Y
Sbjct: 65  RCVPLLVHAMFWYFGATELLPLAVKEWIYEQ-----DLSMIAGAT----------ALIVY 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +A+F+AE +RSG+ ++  GQ+EAA ALG    ++ R V+ PQA+ ++IPPL  Q + + K
Sbjct: 110 SASFVAEDIRSGIRSISGGQIEAARALGFGFLRSFRWVIFPQAIEAVIPPLIGQAMVITK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           N+S+ + +G  +L++    + + T + +E
Sbjct: 170 NTSVTLMIGVVELINATRRVQDATFRIVE 198


>gi|288934567|ref|YP_003438626.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288889276|gb|ADC57594.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 222

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG VL+L   R+S  +  K    L  +YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLVLGFVLALM--RMSPLWPVKW---LARMYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 194 LIYWVMATVLSSLQNYFENQLNRQERD 220



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R+Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPLWPVKWLARMYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107


>gi|261314497|ref|ZP_05953694.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261303523|gb|EEY07020.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
          Length = 357

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + 
Sbjct: 225 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNT 284

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 285 FIGLFKDTSLVYIIGMFDLLGI 306


>gi|115358739|ref|YP_775877.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115284027|gb|ABI89543.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 500

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 10/183 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++LG++L  F   L+R  H    K    +YI  F    LP LVL+   Y L    P   
Sbjct: 31  AWLLGVLLG-FPVALARQSHRPLLKRAAAVYIWFFR--SLPLLVLLVFIYNLPQVFPATS 87

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                  + +S  F +  IA+     A+ AEI R G+++VPRGQ+EA  ALG+      R
Sbjct: 88  -------AVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQR 140

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L+++PQA+R  +P L ++++ ++K +SL   +  A+++ VG  +  Q     E +L   F
Sbjct: 141 LIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAF 200

Query: 373 IYL 375
            Y+
Sbjct: 201 YYV 203


>gi|297562617|ref|YP_003681591.1| polar amino acid ABC transporter inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296847065|gb|ADH69085.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 310

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 97/183 (53%), Gaps = 34/183 (18%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLV 236
           +T+       V   VLGIVL++   RLS +         P+L    ++ T+   G+P LV
Sbjct: 68  ITLSATVLSMVIGVVLGIVLAVM--RLSGN---------PVLVSVSWLYTWFFRGVPRLV 116

Query: 237 L------IALKYQ-----LHFDK---PVLG-----QFNFIGGSTVSPEFMSLYIALSCYT 277
           L      IA+ YQ     L FD    P LG     +F  I   TV   + +  +ALS   
Sbjct: 117 LAVLFGNIAILYQTIEFGLPFDNYWMPWLGLEGDARFFEIDTRTVLSGYTAGLLALSLSE 176

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AEI+R+GL +V +GQ EAA ALG+   K  R + LPQAMR ++PP  ++ + +LK+
Sbjct: 177 GAYMAEIIRAGLQSVNKGQTEAAQALGMGKGKVLRRITLPQAMRVVVPPTGNETIAMLKD 236

Query: 338 SSL 340
           ++L
Sbjct: 237 TAL 239


>gi|323339542|ref|ZP_08079817.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus ruminis ATCC 25644]
 gi|323093022|gb|EFZ35619.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus ruminis ATCC 25644]
          Length = 229

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 75/125 (60%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   + A+ AEI RSG+I+VP+GQ EA ++LGL        ++LPQA+R+++P L ++
Sbjct: 99  IALGINSGAYTAEIFRSGIISVPKGQTEAGLSLGLDELTTMTSIVLPQAVRNVLPALCNE 158

Query: 331 YLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +++L+K SS+   +G  DL +    +GGT+ +     I   +I+  +   LS  +++   
Sbjct: 159 FISLIKESSVLFYIGVQDLTAQALGIGGTLYDFVPPLIVAAIIYFILTFLLSQSVSVLEK 218

Query: 387 RLNAK 391
           ++  K
Sbjct: 219 KMGKK 223



 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 44/82 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y      G   T  ++  G+    ++G +V + R+S  K+++W+ R YV + R  P +
Sbjct: 6   SKYYPLFFCGTAQTVIISLIGVAIGILLGLIVVSMRMSDFKVLSWLARCYVSIVRGTPAM 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIV 164
           + +  +Y S+  +L +PD SI+
Sbjct: 66  IQVMLIYYSLSKLLELPDVSIL 87


>gi|220913228|ref|YP_002488537.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219860106|gb|ACL40448.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 254

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 84/134 (62%), Gaps = 7/134 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+I EI RSG+ +V +GQ+EA+ ALG ++  + RLV++PQ +R ++P L +Q
Sbjct: 107 LALTLIAAAYIGEIFRSGIQSVEKGQLEASRALGFSYGSSMRLVVVPQGIRRVLPALVNQ 166

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +++LLK+SSL   +G A    ++  +G   +  TG  +  ++    +YL L++ +  F+N
Sbjct: 167 FISLLKDSSLVFMLGLAASDREIFRIGNDAMANTGN-LSPLVAAGVLYLILTVPLTHFVN 225

Query: 387 RLNAKI--ALKEKK 398
            ++ ++     EKK
Sbjct: 226 FIDNRLRTGRPEKK 239


>gi|229095070|ref|ZP_04226066.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-29]
 gi|229101172|ref|ZP_04231938.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-28]
 gi|229114024|ref|ZP_04243450.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-3]
 gi|228669483|gb|EEL24899.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-3]
 gi|228682300|gb|EEL36411.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-28]
 gi|228688400|gb|EEL42282.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-29]
          Length = 230

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   TYPTLLKATIVTLQLTLTSLVLGSLIGLLFA--FFRISNNKVLNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVVVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 172 LSIAASNFQQLDTYVIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 36.2 bits (82), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 7   STYPT-LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLI 65

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 66  VQIAILYFGITSVV 79


>gi|167579226|ref|ZP_02372100.1| glutamine ABC transporter permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 218

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 23/208 (11%)

Query: 177 SFPTLTMDTNAKIFVF------SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + P LT      +F+        F++G++  +F     R +       L  +YI   LI 
Sbjct: 11  ALPDLTDGVRLTVFIAFFGLAGGFLVGMIAGMF-----RAYGPAALNVLTQVYIE--LIR 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V +     L+F  P+L      G         +  +A++  + A++AE+VR  L+
Sbjct: 64  GTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAYLAEVVRGALL 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+G  EA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +G  +L 
Sbjct: 114 SIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELT 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
             G  II    QA+EI      IYL+L+
Sbjct: 174 RKGQEIIAGNFQAVEIWTAVAAIYLALT 201


>gi|70729726|ref|YP_259465.1| amino acid ABC transporter [Pseudomonas fluorescens Pf-5]
 gi|68344025|gb|AAY91631.1| amino acid ABC transporter [Pseudomonas fluorescens Pf-5]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 80/133 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  M+  I LS + A + A+++R+G+++V  GQ+E A ++GL+  +A R V++PQA+RS 
Sbjct: 87  PALMAGIIGLSLHFAVYNADVIRAGVLSVDPGQIEGARSIGLSRSQAQRYVIVPQALRST 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + PL +  + LLK++SL   +G A+LV      +++T    E  L    IY ++++++  
Sbjct: 147 LAPLGNNLIVLLKDTSLVSIIGIAELVYSAQRAVSETYSPFEFYLAVAVIYYAVNLVLEA 206

Query: 384 FMNRLNAKIALKE 396
            ++ L  K+ +  
Sbjct: 207 GLHLLETKVEMSR 219


>gi|15800562|ref|NP_286574.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|15830142|ref|NP_308915.1| glutamine ABC transporter permease [Escherichia coli O157:H7 str.
           Sakai]
 gi|16128778|ref|NP_415331.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112178|ref|NP_706688.1| glutamine ABC transporter permease protein [Shigella flexneri 2a
           str. 301]
 gi|26246785|ref|NP_752825.1| glutamine ABC transporter permease [Escherichia coli CFT073]
 gi|30062294|ref|NP_836465.1| glutamine ABC transporter permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|74311353|ref|YP_309772.1| glutamine ABC transporter permease [Shigella sonnei Ss046]
 gi|82543256|ref|YP_407203.1| glutamine ABC transporter permease protein [Shigella boydii Sb227]
 gi|82776111|ref|YP_402458.1| glutamine ABC transporter permease protein [Shigella dysenteriae
           Sd197]
 gi|89107661|ref|AP_001441.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91209844|ref|YP_539830.1| glutamine ABC transporter permease [Escherichia coli UTI89]
 gi|110641014|ref|YP_668742.1| glutamine ABC transporter permease protein [Escherichia coli 536]
 gi|110804810|ref|YP_688330.1| glutamine ABC transporter permease [Shigella flexneri 5 str. 8401]
 gi|117622991|ref|YP_851904.1| glutamine ABC transporter permease protein [Escherichia coli APEC
           O1]
 gi|157157493|ref|YP_001462004.1| glutamine ABC transporter permease protein [Escherichia coli
           E24377A]
 gi|157160287|ref|YP_001457605.1| glutamine ABC transporter permease protein [Escherichia coli HS]
 gi|168749989|ref|ZP_02775011.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168764283|ref|ZP_02789290.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168777206|ref|ZP_02802213.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168779357|ref|ZP_02804364.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787026|ref|ZP_02812033.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168799913|ref|ZP_02824920.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|170020834|ref|YP_001725788.1| glutamine ABC transporter permease protein [Escherichia coli ATCC
           8739]
 gi|170080469|ref|YP_001729789.1| glutamine ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170683637|ref|YP_001742914.1| glutamine ABC transporter permease [Escherichia coli SMS-3-5]
 gi|188493452|ref|ZP_03000722.1| glutamine ABC transporter, permease protein [Escherichia coli
           53638]
 gi|191166172|ref|ZP_03028006.1| glutamine ABC transporter, permease protein [Escherichia coli B7A]
 gi|191173751|ref|ZP_03035274.1| glutamine ABC transporter, permease protein [Escherichia coli F11]
 gi|193064434|ref|ZP_03045515.1| glutamine ABC transporter, permease protein [Escherichia coli E22]
 gi|193069376|ref|ZP_03050331.1| glutamine ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194428172|ref|ZP_03060715.1| glutamine ABC transporter, permease protein [Escherichia coli B171]
 gi|194438438|ref|ZP_03070528.1| glutamine ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|195936851|ref|ZP_03082233.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809031|ref|ZP_03251368.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815025|ref|ZP_03256204.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822695|ref|ZP_03263014.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209399532|ref|YP_002269480.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209918057|ref|YP_002292141.1| glutamine ABC transporter permease [Escherichia coli SE11]
 gi|215485897|ref|YP_002328328.1| glutamine ABC transporter permease protein [Escherichia coli
           O127:H6 str. E2348/69]
 gi|217324127|ref|ZP_03440211.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|218553396|ref|YP_002386309.1| glutamine ABC transporter permease [Escherichia coli IAI1]
 gi|218557715|ref|YP_002390628.1| glutamine ABC transporter permease protein [Escherichia coli S88]
 gi|218688596|ref|YP_002396808.1| glutamine ABC transporter permease [Escherichia coli ED1a]
 gi|218694284|ref|YP_002401951.1| glutamine ABC transporter permease protein [Escherichia coli 55989]
 gi|218699184|ref|YP_002406813.1| glutamine ABC transporter permease [Escherichia coli IAI39]
 gi|218704188|ref|YP_002411707.1| glutamine ABC transporter permease protein [Escherichia coli
           UMN026]
 gi|227884227|ref|ZP_04002032.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Escherichia coli 83972]
 gi|237707230|ref|ZP_04537711.1| glutamine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|238900069|ref|YP_002925865.1| glutamine transporter subunit [Escherichia coli BW2952]
 gi|253774187|ref|YP_003037018.1| glutamine ABC transporter permease [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160887|ref|YP_003043995.1| glutamine ABC transporter permease [Escherichia coli B str. REL606]
 gi|254792005|ref|YP_003076842.1| glutamine ABC transporter permease [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021119|ref|ZP_05434984.1| glutamine ABC transporter permease protein [Shigella sp. D9]
 gi|256023594|ref|ZP_05437459.1| glutamine ABC transporter permease protein [Escherichia sp.
           4_1_40B]
 gi|260843053|ref|YP_003220831.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O103:H2 str. 12009]
 gi|261225459|ref|ZP_05939740.1| glutamine transporter subunit; membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258572|ref|ZP_05951105.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291281807|ref|YP_003498625.1| Glutamine transport system permease protein glnP [Escherichia coli
           O55:H7 str. CB9615]
 gi|293404110|ref|ZP_06648104.1| glnP [Escherichia coli FVEC1412]
 gi|293409186|ref|ZP_06652762.1| glnP [Escherichia coli B354]
 gi|293433071|ref|ZP_06661499.1| glnP [Escherichia coli B088]
 gi|300816458|ref|ZP_07096680.1| glutamine ABC transporter permease protein [Escherichia coli MS
           107-1]
 gi|300824271|ref|ZP_07104388.1| glutamine ABC transporter permease protein [Escherichia coli MS
           119-7]
 gi|300898302|ref|ZP_07116652.1| glutamine ABC transporter permease protein [Escherichia coli MS
           198-1]
 gi|300907140|ref|ZP_07124805.1| glutamine ABC transporter permease protein [Escherichia coli MS
           84-1]
 gi|300920060|ref|ZP_07136518.1| glutamine ABC transporter permease protein [Escherichia coli MS
           115-1]
 gi|300922835|ref|ZP_07138921.1| glutamine ABC transporter permease protein [Escherichia coli MS
           182-1]
 gi|300929386|ref|ZP_07144856.1| glutamine ABC transporter permease protein [Escherichia coli MS
           187-1]
 gi|300939847|ref|ZP_07154484.1| glutamine ABC transporter permease protein [Escherichia coli MS
           21-1]
 gi|300947106|ref|ZP_07161322.1| glutamine ABC transporter permease protein [Escherichia coli MS
           116-1]
 gi|300957009|ref|ZP_07169258.1| glutamine ABC transporter permease protein [Escherichia coli MS
           175-1]
 gi|300993337|ref|ZP_07180353.1| glutamine ABC transporter permease protein [Escherichia coli MS
           45-1]
 gi|301027259|ref|ZP_07190618.1| glutamine ABC transporter permease protein [Escherichia coli MS
           196-1]
 gi|301051267|ref|ZP_07198095.1| glutamine ABC transporter permease protein [Escherichia coli MS
           185-1]
 gi|301303568|ref|ZP_07209690.1| glutamine ABC transporter permease protein [Escherichia coli MS
           124-1]
 gi|301328004|ref|ZP_07221167.1| glutamine ABC transporter permease protein [Escherichia coli MS
           78-1]
 gi|301646242|ref|ZP_07246137.1| glutamine ABC transporter permease protein [Escherichia coli MS
           146-1]
 gi|306812787|ref|ZP_07446980.1| glutamine ABC transporter permease protein [Escherichia coli NC101]
 gi|307137435|ref|ZP_07496791.1| glutamine ABC transporter permease protein [Escherichia coli H736]
 gi|307313780|ref|ZP_07593397.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309786523|ref|ZP_07681146.1| glutamine transport system permease protein glnP [Shigella
           dysenteriae 1617]
 gi|309798040|ref|ZP_07692416.1| glutamine ABC transporter permease protein [Escherichia coli MS
           145-7]
 gi|312969166|ref|ZP_07783373.1| glutamine transport system permease protein glnP [Escherichia coli
           2362-75]
 gi|312970887|ref|ZP_07785066.1| glutamine transport system permease protein glnP [Escherichia coli
           1827-70]
 gi|331641326|ref|ZP_08342461.1| glutamine transport system permease protein GlnP [Escherichia coli
           H736]
 gi|331646029|ref|ZP_08347132.1| glutamine transport system permease protein GlnP [Escherichia coli
           M605]
 gi|331651819|ref|ZP_08352838.1| glutamine transport system permease protein GlnP [Escherichia coli
           M718]
 gi|331656831|ref|ZP_08357793.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA206]
 gi|331662167|ref|ZP_08363090.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA143]
 gi|331667179|ref|ZP_08368044.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA271]
 gi|331672316|ref|ZP_08373107.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA280]
 gi|331676548|ref|ZP_08377244.1| glutamine transport system permease protein GlnP [Escherichia coli
           H591]
 gi|331682317|ref|ZP_08382936.1| glutamine transport system permease protein GlnP [Escherichia coli
           H299]
 gi|84028669|sp|P0AEQ8|GLNP_ECO57 RecName: Full=Glutamine transport system permease protein glnP
 gi|84028670|sp|P0AEQ7|GLNP_ECOL6 RecName: Full=Glutamine transport system permease protein glnP
 gi|84028671|sp|P0AEQ6|GLNP_ECOLI RecName: Full=Glutamine transport system permease protein glnP
 gi|84028672|sp|P0AEQ9|GLNP_SHIFL RecName: Full=Glutamine transport system permease protein glnP
 gi|12513809|gb|AAG55182.1|AE005262_2 glutamine high-affinity transport system; membrane component
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107184|gb|AAN79368.1|AE016757_272 Glutamine transport system permease protein glnP [Escherichia coli
           CFT073]
 gi|41572|emb|CAA32383.1| unnamed protein product [Escherichia coli K-12]
 gi|1787030|gb|AAC73897.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|4062376|dbj|BAA35482.1| glutamine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|13360347|dbj|BAB34311.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli O157:H7 str. Sakai]
 gi|24051018|gb|AAN42395.1| glutamine transport protein GlnP [Shigella flexneri 2a str. 301]
 gi|30040539|gb|AAP16271.1| glutamine transport protein GlnP [Shigella flexneri 2a str. 2457T]
 gi|73854830|gb|AAZ87537.1| glutamine high-affinity transport system membrane component
           [Shigella sonnei Ss046]
 gi|81240259|gb|ABB60969.1| glutamine high-affinity transport system, membrane component
           [Shigella dysenteriae Sd197]
 gi|81244667|gb|ABB65375.1| glutamine high-affinity transport system, membrane component
           [Shigella boydii Sb227]
 gi|91071418|gb|ABE06299.1| glutamine transport system permease protein glnP [Escherichia coli
           UTI89]
 gi|110342606|gb|ABG68843.1| glutamine transport system permease protein GlnP [Escherichia coli
           536]
 gi|110614358|gb|ABF03025.1| glutamine high-affinity transport system [Shigella flexneri 5 str.
           8401]
 gi|115512115|gb|ABJ00190.1| glutamine transport protein GlnP [Escherichia coli APEC O1]
 gi|157065967|gb|ABV05222.1| glutamine ABC transporter, permease protein [Escherichia coli HS]
 gi|157079523|gb|ABV19231.1| glutamine ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|169755762|gb|ACA78461.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169888304|gb|ACB02011.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|170521355|gb|ACB19533.1| glutamine ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|187767493|gb|EDU31337.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188015705|gb|EDU53827.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188488651|gb|EDU63754.1| glutamine ABC transporter, permease protein [Escherichia coli
           53638]
 gi|189002956|gb|EDU71942.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189365687|gb|EDU84103.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189373069|gb|EDU91485.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189377797|gb|EDU96213.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|190903781|gb|EDV63496.1| glutamine ABC transporter, permease protein [Escherichia coli B7A]
 gi|190906001|gb|EDV65617.1| glutamine ABC transporter, permease protein [Escherichia coli F11]
 gi|192928896|gb|EDV82509.1| glutamine ABC transporter, permease protein [Escherichia coli E22]
 gi|192957329|gb|EDV87777.1| glutamine ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194413732|gb|EDX30011.1| glutamine ABC transporter, permease protein [Escherichia coli B171]
 gi|194422662|gb|EDX38659.1| glutamine ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|208728832|gb|EDZ78433.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208731673|gb|EDZ80361.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738180|gb|EDZ85863.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160932|gb|ACI38365.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209775798|gb|ACI86211.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209775800|gb|ACI86212.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209775802|gb|ACI86213.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209775804|gb|ACI86214.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209775806|gb|ACI86215.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209911316|dbj|BAG76390.1| glutamine ABC transporter permease component [Escherichia coli
           SE11]
 gi|215263969|emb|CAS08310.1| glutamine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217320348|gb|EEC28772.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|218351016|emb|CAU96720.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218360164|emb|CAQ97713.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218364484|emb|CAR02166.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218369170|emb|CAR16925.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218426160|emb|CAR06980.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|218431285|emb|CAR12163.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222032540|emb|CAP75279.1| glutamine transport system permease protein glnP [Escherichia coli
           LF82]
 gi|226898440|gb|EEH84699.1| glutamine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|227838979|gb|EEJ49445.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Escherichia coli 83972]
 gi|238861340|gb|ACR63338.1| glutamine transporter subunit [Escherichia coli BW2952]
 gi|242376602|emb|CAQ31311.1| glnP, subunit of glutamine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325231|gb|ACT29833.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972788|gb|ACT38459.1| glutamine ABC transporter permease protein [Escherichia coli B str.
           REL606]
 gi|253977008|gb|ACT42678.1| glutamine ABC transporter permease protein [Escherichia coli
           BL21(DE3)]
 gi|254591405|gb|ACT70766.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257758200|dbj|BAI29697.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O103:H2 str. 12009]
 gi|260450043|gb|ACX40465.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177946|dbj|BAI54276.1| glutamine ABC transporter permease component [Escherichia coli
           SE15]
 gi|281600135|gb|ADA73119.1| Glutamine transport system permease protein glnP [Shigella flexneri
           2002017]
 gi|284920662|emb|CBG33725.1| glutamine ABC transporter, permease protein [Escherichia coli 042]
 gi|290761680|gb|ADD55641.1| Glutamine transport system permease protein glnP [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323890|gb|EFE63312.1| glnP [Escherichia coli B088]
 gi|291428696|gb|EFF01721.1| glnP [Escherichia coli FVEC1412]
 gi|291469654|gb|EFF12138.1| glnP [Escherichia coli B354]
 gi|294492644|gb|ADE91400.1| glutamine ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|299879364|gb|EFI87575.1| glutamine ABC transporter permease protein [Escherichia coli MS
           196-1]
 gi|300297084|gb|EFJ53469.1| glutamine ABC transporter permease protein [Escherichia coli MS
           185-1]
 gi|300316228|gb|EFJ66012.1| glutamine ABC transporter permease protein [Escherichia coli MS
           175-1]
 gi|300358026|gb|EFJ73896.1| glutamine ABC transporter permease protein [Escherichia coli MS
           198-1]
 gi|300401107|gb|EFJ84645.1| glutamine ABC transporter permease protein [Escherichia coli MS
           84-1]
 gi|300406630|gb|EFJ90168.1| glutamine ABC transporter permease protein [Escherichia coli MS
           45-1]
 gi|300412926|gb|EFJ96236.1| glutamine ABC transporter permease protein [Escherichia coli MS
           115-1]
 gi|300420867|gb|EFK04178.1| glutamine ABC transporter permease protein [Escherichia coli MS
           182-1]
 gi|300453255|gb|EFK16875.1| glutamine ABC transporter permease protein [Escherichia coli MS
           116-1]
 gi|300455311|gb|EFK18804.1| glutamine ABC transporter permease protein [Escherichia coli MS
           21-1]
 gi|300462651|gb|EFK26144.1| glutamine ABC transporter permease protein [Escherichia coli MS
           187-1]
 gi|300523245|gb|EFK44314.1| glutamine ABC transporter permease protein [Escherichia coli MS
           119-7]
 gi|300531148|gb|EFK52210.1| glutamine ABC transporter permease protein [Escherichia coli MS
           107-1]
 gi|300841067|gb|EFK68827.1| glutamine ABC transporter permease protein [Escherichia coli MS
           124-1]
 gi|300845496|gb|EFK73256.1| glutamine ABC transporter permease protein [Escherichia coli MS
           78-1]
 gi|301075539|gb|EFK90345.1| glutamine ABC transporter permease protein [Escherichia coli MS
           146-1]
 gi|305853550|gb|EFM53989.1| glutamine ABC transporter permease protein [Escherichia coli NC101]
 gi|306906420|gb|EFN36934.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307552655|gb|ADN45430.1| glutamine transport system permease protein [Escherichia coli ABU
           83972]
 gi|307627780|gb|ADN72084.1| glutamine ABC transporter permease protein [Escherichia coli UM146]
 gi|308118370|gb|EFO55632.1| glutamine ABC transporter permease protein [Escherichia coli MS
           145-7]
 gi|308925586|gb|EFP71070.1| glutamine transport system permease protein glnP [Shigella
           dysenteriae 1617]
 gi|309701088|emb|CBJ00386.1| glutamine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|310336648|gb|EFQ01815.1| glutamine transport system permease protein glnP [Escherichia coli
           1827-70]
 gi|312286568|gb|EFR14481.1| glutamine transport system permease protein glnP [Escherichia coli
           2362-75]
 gi|312945328|gb|ADR26155.1| glutamine ABC transporter permease protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|313650289|gb|EFS14701.1| glutamine transport system permease protein glnP [Shigella flexneri
           2a str. 2457T]
 gi|315060046|gb|ADT74373.1| glutamine transporter subunit [Escherichia coli W]
 gi|315135460|dbj|BAJ42619.1| glutamine transport system permease protein glnP [Escherichia coli
           DH1]
 gi|315257799|gb|EFU37767.1| glutamine ABC transporter permease protein [Escherichia coli MS
           85-1]
 gi|315287229|gb|EFU46641.1| glutamine ABC transporter permease protein [Escherichia coli MS
           110-3]
 gi|315292587|gb|EFU51939.1| glutamine ABC transporter permease protein [Escherichia coli MS
           153-1]
 gi|315299324|gb|EFU58576.1| glutamine ABC transporter permease protein [Escherichia coli MS
           16-3]
 gi|315619814|gb|EFV00333.1| glutamine transport system permease protein glnP [Escherichia coli
           3431]
 gi|320177301|gb|EFW52305.1| Glutamate transport membrane-spanning protein [Shigella dysenteriae
           CDC 74-1112]
 gi|320183305|gb|EFW58160.1| Glutamate transport membrane-spanning protein [Shigella flexneri
           CDC 796-83]
 gi|320192713|gb|EFW67354.1| Glutamate transport membrane-spanning protein [Escherichia coli
           O157:H7 str. EC1212]
 gi|320196694|gb|EFW71317.1| Glutamate transport membrane-spanning protein [Escherichia coli
           WV_060327]
 gi|320198999|gb|EFW73596.1| Glutamate transport membrane-spanning protein [Escherichia coli
           EC4100B]
 gi|320637673|gb|EFX07465.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320642799|gb|EFX12000.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320648255|gb|EFX16910.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320654092|gb|EFX22160.1| glutamine ABC transporter permease protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320659715|gb|EFX27271.1| glutamine ABC transporter permease protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320664186|gb|EFX31337.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323159629|gb|EFZ45608.1| glutamine transport system permease protein glnP [Escherichia coli
           E128010]
 gi|323185034|gb|EFZ70400.1| glutamine transport system permease protein glnP [Escherichia coli
           1357]
 gi|323190938|gb|EFZ76205.1| glutamine transport system permease protein glnP [Escherichia coli
           RN587/1]
 gi|323379395|gb|ADX51663.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323938165|gb|EGB34425.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1520]
 gi|323942683|gb|EGB38848.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E482]
 gi|323947104|gb|EGB43116.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H120]
 gi|323953527|gb|EGB49393.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H252]
 gi|323958099|gb|EGB53808.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H263]
 gi|323963057|gb|EGB58628.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H489]
 gi|323967412|gb|EGB62833.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli M863]
 gi|323971976|gb|EGB67197.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TA007]
 gi|323976804|gb|EGB71892.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TW10509]
 gi|324009667|gb|EGB78886.1| glutamine ABC transporter permease protein [Escherichia coli MS
           57-2]
 gi|324013099|gb|EGB82318.1| glutamine ABC transporter permease protein [Escherichia coli MS
           60-1]
 gi|324018515|gb|EGB87734.1| glutamine ABC transporter permease protein [Escherichia coli MS
           117-3]
 gi|324116234|gb|EGC10156.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1167]
 gi|326338302|gb|EGD62131.1| Glutamate transport membrane-spanning protein [Escherichia coli
           O157:H7 str. 1125]
 gi|326346280|gb|EGD70018.1| Glutamate transport membrane-spanning protein [Escherichia coli
           O157:H7 str. 1044]
 gi|327253597|gb|EGE65226.1| glutamine transport system permease protein glnP [Escherichia coli
           STEC_7v]
 gi|330910554|gb|EGH39064.1| glutamate transport membrane-spanning protein [Escherichia coli
           AA86]
 gi|331038124|gb|EGI10344.1| glutamine transport system permease protein GlnP [Escherichia coli
           H736]
 gi|331044781|gb|EGI16908.1| glutamine transport system permease protein GlnP [Escherichia coli
           M605]
 gi|331050097|gb|EGI22155.1| glutamine transport system permease protein GlnP [Escherichia coli
           M718]
 gi|331055079|gb|EGI27088.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA206]
 gi|331060589|gb|EGI32553.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA143]
 gi|331065535|gb|EGI37428.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA271]
 gi|331070511|gb|EGI41875.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA280]
 gi|331075237|gb|EGI46535.1| glutamine transport system permease protein GlnP [Escherichia coli
           H591]
 gi|331079948|gb|EGI51127.1| glutamine transport system permease protein GlnP [Escherichia coli
           H299]
 gi|332097551|gb|EGJ02531.1| glutamine transport system permease protein glnP [Shigella boydii
           3594-74]
 gi|332104698|gb|EGJ08044.1| glutamine transporter GlnP [Shigella sp. D9]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|329922367|ref|ZP_08278044.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328942230|gb|EGG38501.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 480

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 18/208 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F+LG++++L      R    K  K L   YI   +I G P LV +   + +H+    
Sbjct: 291 LFGFILGLIIALM-----RMSGVKILKFLATAYIE--IIRGTPMLVQL---FIIHYS--- 337

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  F+       SP   S  + LS  +AA++AEI R+G+  V RGQ+EAA +LG+T  KA
Sbjct: 338 LAAFDI----KFSP-IQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTKGKA 392

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA++ ++P + ++++ ++K SS+   +G  D++     +   T   +  +L+ 
Sbjct: 393 MRHIILPQALKGVLPAIGNEFVVIIKESSIVSFIGVFDIMYQAQILRGSTFAPLNPLLVA 452

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             IY  L+ +++  +     K++  + +
Sbjct: 453 AMIYFILTFVLSKLLGVWERKLSASDNR 480


>gi|326792535|ref|YP_004310356.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326543299|gb|ADZ85158.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 246

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 94/166 (56%), Gaps = 12/166 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++I G P+++ I L + + F    + +  ++GG           IA    + A++AE++R
Sbjct: 89  YIIRGTPSVLQIVLMWNVVFANATIDRI-WVGG-----------IAFGINSGAYMAELIR 136

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  + +GQMEA  +LGL + +  R V+LPQA   ++P   S+++ L+K +++   +G 
Sbjct: 137 AGIQGIDKGQMEAGRSLGLGYGQTMRHVILPQAFIQMLPAFVSEFIILIKETAIIGFIGG 196

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            DL+     I+++T  A++ +LI    Y  ++ ++ +FM ++  K+
Sbjct: 197 LDLMKAQDIIMSRTFNALQPLLIVGVCYFIITSLLTVFMRQIEKKV 242


>gi|206577408|ref|YP_002239112.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288936013|ref|YP_003440072.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290512818|ref|ZP_06552183.1| amino acid ABC transporter [Klebsiella sp. 1_1_55]
 gi|206566466|gb|ACI08242.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288890722|gb|ADC59040.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289774701|gb|EFD82704.1| amino acid ABC transporter [Klebsiella sp. 1_1_55]
          Length = 241

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 13/185 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + GK L   Y+  +L  G P L      +Q+ F   VL  F     +     F    +AL
Sbjct: 49  RAGKGLAFFYL--WLFRGTPVL------FQIIFVYNVLPGFGLRFSA-----FTCAVLAL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S    A++AEI+RSGL AV  GQ  A +ALG+TH +  R ++LPQA R ++PP+ +Q ++
Sbjct: 96  SLNEGAYMAEILRSGLQAVKSGQRTAGMALGMTHGQIMRKIVLPQAARIVLPPMGNQMIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +LK+S+L   +   +L+ V     + + +  E +      YL L+ +  +F + L   + 
Sbjct: 156 MLKSSALVSVIAVQELLLVANQAASASFRYFEALCAAGIYYLLLTSLFMIFQSWLERVLD 215

Query: 394 LKEKK 398
            ++++
Sbjct: 216 PRQRR 220


>gi|148653869|ref|YP_001280962.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148572953|gb|ABQ95012.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 241

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 13/181 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYI 271
           + LP LYI  F   G P LV I L Y        L QF FI  S +        F    I
Sbjct: 52  QVLPFLYI--FFFRGTPLLVQIFLIYY------GLSQFEFIKDSALWEPVLKQPFWCAII 103

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +  T+A+ AEI+R  + ++P G++EAA A+G++  +    + LP+A   ++P  +++ 
Sbjct: 104 AFTLNTSAYTAEIIRGAIQSIPPGELEAADAIGMSRWQKLTRITLPRAFGIMLPAYSNEV 163

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK SSLA+ +   D+  +  TI  +T    E+      IYL LS +I L    L  +
Sbjct: 164 IFMLKGSSLAMTIALMDITGIAKTISARTYTIFELYFAAGLIYLVLSWVILLTFRFLEKR 223

Query: 392 I 392
           +
Sbjct: 224 M 224


>gi|332179315|gb|AEE15004.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermodesulfobium narugense DSM 14796]
          Length = 225

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 58/89 (65%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P F    I +  Y  A+IAE+VR+G+ A+ RGQ+EAA + G T  +A R ++LPQA  
Sbjct: 91  VLPVFAVGVIGVGVYHGAYIAEVVRAGIQAIHRGQLEAAYSQGFTFWQAMRYIILPQAKI 150

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            I PPLT+Q ++L+KN+S+   V   DL+
Sbjct: 151 IIFPPLTNQAVSLIKNTSVMAMVAGGDLM 179


>gi|325125966|gb|ADY85296.1| Glutamine ABC transporter permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 493

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 75/131 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+  K  R V+ PQA+++I
Sbjct: 358 PALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLSQAKTYRYVVFPQALKNI 417

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++++ L K+SSL   +G  +L+   G +   T + +  + I M IY  ++ +   
Sbjct: 418 WPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMPLFITMCIYFVVTFIFTR 477

Query: 384 FMNRLNAKIAL 394
            +N    ++ L
Sbjct: 478 LLNYFERRMNL 488



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSG 103
            +N   NN +K +L     ++   A            S S YA+    G   T  +    
Sbjct: 243 AINKTINNCQKQDL-FNKKYIPAAAKAMKQASSKTNNSMSKYASYFATGLGYTMIITICS 301

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +    ++G +    RLS NKL+  I   Y+E  R  P +V I F+Y
Sbjct: 302 ITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQMVQIMFVY 347


>gi|317402648|gb|EFV83206.1| amino acids ABC transporter [Achromobacter xylosoxidans C54]
          Length = 238

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 22/175 (12%)

Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +L+  LP L+ I   Y    L   +PV G    +             +AL CY +A++AE
Sbjct: 66  YLVRSLPLLMFIFWAYFFVPLIIGRPVAGTTTMV-------------VALVCYESAYLAE 112

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ A+P GQ EA  ALGL++ +  R V+LPQA+ +++P + SQ+++ +K +SLA  
Sbjct: 113 IIRAGIQALPPGQQEAGRALGLSYMQTMRRVILPQALYNMLPSMLSQFVSTVKETSLAYV 172

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +L        NQ    +      +F  L+L+  I  F   L+A + L EK+
Sbjct: 173 ISVQELTYAA----NQINSVLLTKPFEVFALLALTYFILNF--GLSALVHLTEKR 221


>gi|194433177|ref|ZP_03065459.1| glutamine ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194418674|gb|EDX34761.1| glutamine ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|332091105|gb|EGI96195.1| glutamine transport system permease protein glnP [Shigella
           dysenteriae 155-74]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARAFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|171462944|ref|YP_001797057.1| polar amino acid ABC transporter, inner membrane subunit
           [Polynucleobacter necessarius subsp. necessarius STIR1]
 gi|171192482|gb|ACB43443.1| polar amino acid ABC transporter, inner membrane subunit
           [Polynucleobacter necessarius subsp. necessarius STIR1]
          Length = 158

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 72/124 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I    + AAF +EIVR+G+ +VP+GQ+ A  ALG+T+ +  RLV LPQA R++IP   +Q
Sbjct: 33  ITFIAFEAAFFSEIVRAGIQSVPKGQIYAGEALGMTYGQNMRLVFLPQAFRNVIPVFMTQ 92

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L +N+SL  A+G  DL+          G+ IE  ++    Y  +   ++  +  + A
Sbjct: 93  TIILFQNTSLVYAIGAYDLLKGFEIAGKNYGRPIETYILAAATYFIICFSLSKAVRAIQA 152

Query: 391 KIAL 394
           K+A+
Sbjct: 153 KVAI 156


>gi|54023858|ref|YP_118100.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
 gi|54015366|dbj|BAD56736.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
          Length = 308

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 24/225 (10%)

Query: 167 FGMFL-NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL--- 222
           +G +L + R LS   +T++        + VLG VL++   RLS +         P+L   
Sbjct: 55  YGRYLFDTRILSGALVTLELTVLAMAIAIVLGTVLAVM--RLSPN---------PVLRST 103

Query: 223 -YISTFLIFGLPTLVLI-------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
            ++  ++  G P  V +       +L  Q+    P   QF  +    +   F    I L 
Sbjct: 104 AWVYLWIFRGTPVFVQLVFWGLFPSLYRQIDLGVPFGPQFFHLDVQGLQAAFAFAVIGLG 163

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA++AEIVR+G+ +V  GQ EA+IALG++  +  R  +LPQAMR IIPP  ++ + +
Sbjct: 164 LNEAAYMAEIVRAGINSVGEGQREASIALGMSWAQTMRRTVLPQAMRVIIPPTGNELIGM 223

Query: 335 LKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           LK +SL  A+  + DL      I     Q I ++L+    YL+++
Sbjct: 224 LKTTSLVTAIPLSTDLYGRARDIYGVNFQPIPLLLVTATWYLAIT 268


>gi|227355081|ref|ZP_03839492.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Proteus mirabilis ATCC 29906]
 gi|227164868|gb|EEI49715.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Proteus mirabilis ATCC 29906]
          Length = 249

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+  T+++IA  V++G++A+ +GQ +A ++LG    +    ++LPQA+R +
Sbjct: 94  PEITTVICALALITSSYIAHGVKAGILAIGKGQWQAGLSLGFNRWQTLWYIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG  +L  +   + N++    +E+ L   FIY  L   + 
Sbjct: 154 VPSFINQWIALIKDTSLAYVVGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLE 213

Query: 383 LFMNRLNAKIALKEKK 398
           L  NR+      +++K
Sbjct: 214 LIANRVGKLFTPQKEK 229


>gi|86360897|ref|YP_472784.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284999|gb|ABC94057.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 220

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 24/180 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +  F  F LP       +  L  DK                   S  + LS Y
Sbjct: 65  RNLPILVLVLFAFFALP-------QMGLRLDK-----------------MKSFVLVLSLY 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AE+ R+GL+++PRG  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K
Sbjct: 101 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTAMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SLA A+   +L      I  ++ + IE  ++   +Y++   +IA  M  +  ++AL  
Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR 220


>gi|66045741|ref|YP_235582.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256448|gb|AAY37544.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 220

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|172056977|ref|YP_001813437.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
 gi|171989498|gb|ACB60420.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
          Length = 218

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 10/159 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ +A+   +HF  P L  +       V+  + S  IA S  + A+I+EI+R+G+ 
Sbjct: 63  GTPLILQLAI---IHFGLPQLTGY-------VTTGYQSAIIAFSLNSGAYISEIIRAGIQ 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV RGQ EAA ALG+ + K  R ++LPQA ++I+P + ++ + L K S+L   VG  D++
Sbjct: 113 AVDRGQWEAADALGIPYMKQLRSIILPQAFKNILPAIMNELITLTKESALISTVGVLDVM 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                +  +     E +L   F+Y  L + ++L   ++ 
Sbjct: 173 RRAQVVGGEKALYFEPLLFAGFVYFVLVMGLSLIGQQVE 211


>gi|294786680|ref|ZP_06751934.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Parascardovia denticolens F0305]
 gi|315226290|ref|ZP_07868078.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Parascardovia denticolens DSM 10105]
 gi|294485513|gb|EFG33147.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Parascardovia denticolens F0305]
 gi|315120422|gb|EFT83554.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Parascardovia denticolens DSM 10105]
          Length = 324

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 78/121 (64%), Gaps = 4/121 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   AA+++EIVR+GL +V  GQ EA+ ALG++  +  R ++LPQAMR I+PP++++
Sbjct: 170 VGLALNEAAYLSEIVRAGLESVDPGQREASQALGMSRGQIMRRIVLPQAMRIIVPPMSNE 229

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMN 386
            + LLK +SL +AV F  +L  V  +I N+  + I ++L   IW  +  S+ ++   ++ 
Sbjct: 230 AIGLLKTTSLVLAVPFTMELQFVTNSIANRIYKPIPLLLVAAIWYLVITSILMVGQTYLE 289

Query: 387 R 387
           R
Sbjct: 290 R 290


>gi|282165413|ref|YP_003357798.1| putative amino acid ABC transporter permease protein [Methanocella
           paludicola SANAE]
 gi|282157727|dbj|BAI62815.1| putative amino acid ABC transporter permease protein [Methanocella
           paludicola SANAE]
          Length = 442

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 17/203 (8%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG V + F  R     + +  + LP+L    F+ FGLP L+               GQFN
Sbjct: 240 LGRVSTNFLFRAVASIYVEGIRGLPILLQLLFVNFGLPFLI----------SDLTGGQFN 289

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             G       F +  IALS  + A++ EI + G+ AV +GQMEAA +LGL++ ++   ++
Sbjct: 290 IDG-------FTACVIALSINSGAYMGEIFKGGIEAVHKGQMEAARSLGLSYNQSMLFII 342

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA + ++P L ++++ L+K+SS+ + +   ++V    +I  +       +L    +YL
Sbjct: 343 LPQAFKIVLPTLGNEFIALIKDSSIGMVISVMEVVWWSKSIGAEYYNTFTPLLAAGMVYL 402

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++I +   +  +  K +++  +
Sbjct: 403 CITIPLGRAVQYIEKKYSVQNTR 425


>gi|172063474|ref|YP_001811125.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171995991|gb|ACB66909.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 500

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 10/183 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++LG++L  F   L+R  H    K    +YI  F    LP LVL+   Y L        
Sbjct: 31  AWLLGVLLG-FPVALARQSHRPLLKRAAAVYIWFFR--SLPLLVLLVFIYNL-------P 80

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q      + +S  F +  IA+     A+ AEI R G+++VPRGQ+EA  ALG+      R
Sbjct: 81  QVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQR 140

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L+++PQA+R  +P L ++++ ++K +SL   +  A+++ VG  +  Q     E +L   F
Sbjct: 141 LIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAF 200

Query: 373 IYL 375
            Y+
Sbjct: 201 YYV 203


>gi|330971238|gb|EGH71304.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 220

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 AWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|310827296|ref|YP_003959653.1| hypothetical protein ELI_1704 [Eubacterium limosum KIST612]
 gi|308739030|gb|ADO36690.1| hypothetical protein ELI_1704 [Eubacterium limosum KIST612]
          Length = 221

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 116/218 (53%), Gaps = 12/218 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++      +F  + G+V++L   R+S++   K    L   YI  F   G P L+ +  
Sbjct: 16  VTLEIAVVAIIFGAIFGVVIAL--GRISKN---KIFNGLSWFYIWFFR--GTPLLLQL-- 66

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + + +  P++   +  G +      +  +I  S  + A++AEI+R+ + ++  GQMEAA
Sbjct: 67  -FIIFYAVPIV-YLDMTGATFEIDPMICAFITFSLNSTAYLAEIIRAAIESIDHGQMEAA 124

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+++++A   +++PQ  + ++ P+ ++ + LLK++SL   +   DL+    T+ + T
Sbjct: 125 KALGMSYKQAMGKIIIPQTFKRLVAPVGNELIMLLKDTSLVSTIALFDLLRTVKTMASAT 184

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  +  I     IYL L+ ++ +  ++L  K+   EK+
Sbjct: 185 GSWVYYIYA-AVIYLFLTTILQVVFDKLENKLGAYEKR 221


>gi|296156610|ref|ZP_06839448.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893209|gb|EFG72989.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 331

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 10/184 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-------LIALKYQLH 245
           S  +G++L + A  L R        A   LYI  ++  G P LV       L AL  Q+ 
Sbjct: 91  SMAIGMILGVIAA-LMRQSSNPIVSAFAALYI--WIFRGTPLLVQLIFWYNLAALYPQID 147

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P       +  +++    ++  + L     A++AEIVRSGL++V  GQ EAA +LGL
Sbjct: 148 LGLPFFAPIASLQTNSIVTPIVAALLGLGLNEGAYMAEIVRSGLLSVDPGQREAAYSLGL 207

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +  R ++LPQA+R I+PP  ++ + +LK +SL   +   DL+     I ++T + I 
Sbjct: 208 SPARTIRRIILPQALRVIVPPTGNEIVGMLKATSLVSTLAIGDLLYSAQGIYSRTFETIP 267

Query: 366 IILI 369
           ++++
Sbjct: 268 LLIV 271



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL GF+ T  L  + M    I+G +    R S+N +V+    +Y+ +FR  P LV + F 
Sbjct: 77  ILTGFLWTLGLTAASMAIGMILGVIAALMRQSSNPIVSAFAALYIWIFRGTPLLVQLIFW 136

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           Y   L+ L  P   + LPF
Sbjct: 137 YN--LAAL-YPQIDLGLPF 152


>gi|148974815|ref|ZP_01811795.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145965324|gb|EDK30573.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 292

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 87/160 (54%), Gaps = 1/160 (0%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L L  L  + + D   L  F F G + +     S  I +   ++A+IAE++R+GL +
Sbjct: 127 IPLLGLETLLREHNGDINQLQAFLF-GPANLWENLASGVICIGLLSSAYIAEVIRAGLES 185

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA +LGL+     R V+ PQ + +I PPL  Q ++L+K++S+   +   ++  
Sbjct: 186 IPKGQWEAADSLGLSVFSKYRYVVGPQVLTAITPPLAGQAISLVKDTSIVSLISIQEMTF 245

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  + N +G   EI LI   +Y +L   ++    ++  +
Sbjct: 246 VGTEMANSSGLIFEIWLIVGAVYFALCFTLSRIFRKIEQR 285


>gi|300313149|ref|YP_003777241.1| glutamate/aspartate ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300075934|gb|ADJ65333.1| ABC-type glutamate/aspartate transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 231

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 8/180 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSC 275
           PL +I+T  +  + ++ L+ + +  +F  P +G +  IG S   P     F S  I    
Sbjct: 53  PLSFIATTYVNLIRSIPLVLVIFWFYFLVPFIGAW-MIGAS--EPIQVGAFQSALITFIL 109

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + AA+  EI+RSG+ ++PRGQ+ A  A+G+ + +    V+LPQA R++ P L +Q + L 
Sbjct: 110 FEAAYYCEIMRSGIQSIPRGQVFAGYAIGMNYWQMMGNVVLPQAFRNMTPILLTQTIVLF 169

Query: 336 KNSSLAVAVG-FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++ SL   +G   D V+    I  + G+ +E+ L    +Y  LS  ++  + R   KIA+
Sbjct: 170 QDVSLVYVLGSVPDFVTSASKIAQRDGRLVEMYLFVAVVYFVLSFGLSTLVKRFQKKIAI 229



 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L FS M    I+GTL+   RLS+NK +++I   YV + R+IP ++VIF+ Y
Sbjct: 28  LTFSAMAGGIILGTLLAMMRLSSNKPLSFIATTYVNLIRSIPLVLVIFWFY 78


>gi|145298732|ref|YP_001141573.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851504|gb|ABO89825.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 265

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 62/90 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++LS Y  AF AE++R+G+ A+P GQ EAA +LGL+     R V+LPQ +R ++PPLT++
Sbjct: 137 LSLSLYQGAFTAEVLRAGIQAIPSGQWEAARSLGLSRAITLRKVILPQLVRIVLPPLTNE 196

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++L+K+S+L   +   DL + G T++  T
Sbjct: 197 LVSLIKHSALVSVIAIFDLTNEGRTLVADT 226


>gi|330962037|gb|EGH62297.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 222

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 18/198 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VLG  L+L   RLSR    K    L  +Y+S F   G P LV + L Y   +  P LG  
Sbjct: 36  VLGFGLALM--RLSRF---KPLNWLARIYVSFFR--GTPLLVQLFLIY---YGLPELG-- 83

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  + P   +L I  S   AA+  EI+RS + ++ RGQ EAA ++G+T  +  R  
Sbjct: 84  -----IELDPLTAAL-IGFSLNMAAYACEILRSAISSIERGQWEAAASIGMTRWQTLRRA 137

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R+ +PPL + +++L+K+++LA  +   +L      I  +T +   + L    IY
Sbjct: 138 ILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIY 197

Query: 375 LSLSIMIALFMNRLNAKI 392
             L+  ++   NRL A++
Sbjct: 198 WILATALSYLQNRLEARV 215



 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  K + W+ R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFCGLVLGFGLALMRLSRFKPLNWLARIYVSFFRGTPLLVQLFLI 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|297243838|ref|ZP_06927768.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
 gi|296888259|gb|EFH27001.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
          Length = 337

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 4/143 (2%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + +     +  + LS   +A+++EIVR+GL AV  GQ+EAA ALG+      R
Sbjct: 150 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 209

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL--- 368
            ++LPQAMR I+PPL ++ + +LK +SL +AV F  +L      I N+  + I ++L   
Sbjct: 210 RIILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 269

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           IW  I  S+ +++   + +  AK
Sbjct: 270 IWYLIITSILMVLQYMLEKHFAK 292


>gi|327192285|gb|EGE59250.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 220

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 24/180 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +  F  F LP       +  L  DK                   S  + LS Y
Sbjct: 65  RNLPILVLVLFAFFALP-------QMGLRLDK-----------------MKSFVLVLSLY 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AE+ R+GL+++PRG  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K
Sbjct: 101 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SLA A+   +L      I  ++ + IE  ++   +Y++   +IA  M  +  ++AL  
Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR 220


>gi|295697367|ref|YP_003590605.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295412969|gb|ADG07461.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 222

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 10/161 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L YI+ F   G P  V I L   LHF   V+  FN  GG  +  + +S  IAL   +AA+
Sbjct: 58  LAYITFFR--GTPLFVQILL---LHF--AVIPLFN--GGRALDAQ-ISGTIALLLNSAAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI R+G+ ++ RGQMEAA +LGL   +A   V+LPQA R ++PPL ++ + LLK+SSL
Sbjct: 108 VAEIFRAGIQSIDRGQMEAARSLGLRAGQAMLYVILPQAFRRMLPPLGNEAIALLKDSSL 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              +   ++ +    +  +     E  L   F+YL L++++
Sbjct: 168 LAVIAGGEIATQMNLMFGRILSPWEPFLTLAFVYLVLTLVL 208


>gi|254713632|ref|ZP_05175443.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti
           M644/93/1]
 gi|254716014|ref|ZP_05177825.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti
           M13/05/1]
 gi|261217781|ref|ZP_05932062.1| ABC transporter [Brucella ceti M13/05/1]
 gi|261321371|ref|ZP_05960568.1| ABC transporter [Brucella ceti M644/93/1]
 gi|260922870|gb|EEX89438.1| ABC transporter [Brucella ceti M13/05/1]
 gi|261294061|gb|EEX97557.1| ABC transporter [Brucella ceti M644/93/1]
          Length = 240

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL +IS+  +     +  I + Y   +  P +G           PE +   IAL+ + ++
Sbjct: 50  PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S
Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +   +  A+L   G  I  +T    EI L    IY  ++ + A  M+R
Sbjct: 162 VLSTITMAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209


>gi|51245412|ref|YP_065296.1| amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50876449|emb|CAG36289.1| probable amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 221

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 15/212 (7%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            AK+  FSF+L ++  L    ++R+      ++L LL+ S ++ F   T +LI L + ++
Sbjct: 23  TAKVVFFSFILAMLFGLIVG-VARY----RSRSLYLLF-SPYVEFFRGTPLLIQLFF-IY 75

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P +G             F +  + L     A+I+EI+R  L++V + Q+EA+ ALGL
Sbjct: 76  YGLPTIG--------ISMDSFTAACLGLGLNGGAYISEIIRGSLLSVDQDQLEASYALGL 127

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  ++   V+ PQA    IPPL + + +LLK++SL   +   +L  VG  I  +T +A E
Sbjct: 128 TWFQSMVYVIFPQAFTVAIPPLVNSFSSLLKDTSLVSVLAITELTRVGQLIYTRTFRAFE 187

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I L    +Y  ++ ++ L    L  K  ++ +
Sbjct: 188 IYLAIGMLYFMMTFVMTLLSKYLEKKYKVQGR 219


>gi|320530705|ref|ZP_08031749.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
 gi|320136992|gb|EFW28930.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
          Length = 227

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 75/128 (58%), Gaps = 1/128 (0%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++A     AA+ AEI R+G+ AVPRGQ EAA  LG+++  A R ++LPQ +R  +PP+++
Sbjct: 101 FLAFVLNYAAYFAEIFRAGIQAVPRGQYEAARVLGMSYPLALRRIILPQVLRITLPPVSN 160

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +NL+K++SL   +   DL+ V  TI+ +      +++   F YL+++        +L 
Sbjct: 161 ETINLVKDTSLVYILAMNDLLRVARTIVQREFDMTPLVIAGAF-YLAMTAAFTWGFKKLE 219

Query: 390 AKIALKEK 397
           A     ++
Sbjct: 220 AHYGRYDR 227


>gi|302528609|ref|ZP_07280951.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
 gi|302437504|gb|EFL09320.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
          Length = 298

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 14/176 (7%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI--- 238
           T++          VLG+VL++   RLS +      K    LYI  F   G P  V +   
Sbjct: 67  TIELTVLAMAIGIVLGVVLAVM--RLSAN---PAMKGFASLYIWFFR--GTPVFVQLLFW 119

Query: 239 ----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
               AL  +L    P   QF     + +   F++  + L     A++AE+VR+G+++V R
Sbjct: 120 GYASALYPRLGIGIPFGPQFVSAPTNVLITPFIAAILGLGLNEGAYMAEVVRAGILSVDR 179

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           GQ EAA ALG++  +  R V+LPQAMR IIPP  +Q + +LK +SL   + F +L+
Sbjct: 180 GQTEAAQALGMSRLRTLRRVVLPQAMRVIIPPTGNQVITMLKTTSLVSVLAFPELL 235


>gi|295107159|emb|CBL04702.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 480

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 115/214 (53%), Gaps = 23/214 (10%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + V SF L I L L  +  R+++H   +  +A+   YI+  ++ G P  + + + +   F
Sbjct: 226 VVVVSFPLAIPLGLLLSFLRMAKH---RLPRAIGATYIN--IVRGTPLFLQLYIAF---F 277

Query: 247 DKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P++G    NF  G+          I L   ++A++AEI R+G+ ++ +GQ EAA +LG
Sbjct: 278 GLPLMGVQMDNFTMGA----------IVLVMNSSAYLAEIFRAGIQSISQGQFEAARSLG 327

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +    V++PQ +R +IP +TS+++ + K++SL  AVG  +L+    TI   TG   
Sbjct: 328 MNGAQTMFFVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVTELMMYAKTITAATGNVT 387

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I+   F YL ++I +   +N + A+++   +K
Sbjct: 388 PYIVAAGF-YLIVTIPLTKLINTMEARMSNGRRK 420


>gi|295703708|ref|YP_003596783.1| putative amino acid ABC transporter permease [Bacillus megaterium
           DSM 319]
 gi|294801367|gb|ADF38433.1| putative amino acid ABC transporter, permease protein [Bacillus
           megaterium DSM 319]
          Length = 241

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 20/216 (9%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + S  LG +  LF   + R +     K + ++Y+S   + G P LV +   Y   +  
Sbjct: 26  ISIISMALGSIFGLFIA-VCRIYKIPLLKQIAVIYVS--FMRGTPLLVQL---YVFFYGI 79

Query: 249 PVLGQF------NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           P+  +F        +GG T+SP   +L IA +  T+A+ +E+ RS +  + RGQ EAA +
Sbjct: 80  PIFIEFLNQTQGWHLGGDTISPLIYAL-IAYTLNTSAYQSEVFRSSIQTIDRGQFEAAYS 138

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+T  +A + ++ PQ++ + IP L + +++L+K +SLA AV   +++++   I N   +
Sbjct: 139 IGMTTFQAIKRIIFPQSLVAAIPNLGNIFISLIKATSLAFAVKVVEIMAISKVIANDGYR 198

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +E+ L+   IY     ++  F  RL   I   EKK
Sbjct: 199 YLEMYLVASLIYW----ILCFFFERLFVVI---EKK 227


>gi|291616827|ref|YP_003519569.1| OccM [Pantoea ananatis LMG 20103]
 gi|291151857|gb|ADD76441.1| OccM [Pantoea ananatis LMG 20103]
          Length = 243

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 21/211 (9%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +F+ SF+ G VL+  + A R+SR    +   +    YI  F   G P ++ + L Y    
Sbjct: 24  LFISSFLCGGVLAVGILALRMSRW---RILSSFARGYILVFR--GSPLMIQLFLIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
               LGQF  I  S V P     F    +ALS  TAA+ AEI+R  L+AVP GQ+EA +A
Sbjct: 76  ---GLGQFGVIRHSFVWPFLREPFSCAVLALSLCTAAYTAEILRGALLAVPAGQVEAGMA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T +
Sbjct: 133 CGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYR 192

Query: 363 AIEIILIWMFIYLSLSIMI----ALFMNRLN 389
            +E+ L    IYL L+ +I    AL   RL 
Sbjct: 193 TMEVFLCAAAIYLILNFIIVQLYALLERRLT 223


>gi|154484326|ref|ZP_02026774.1| hypothetical protein EUBVEN_02039 [Eubacterium ventriosum ATCC
           27560]
 gi|149734803|gb|EDM50720.1| hypothetical protein EUBVEN_02039 [Eubacterium ventriosum ATCC
           27560]
          Length = 346

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 75/120 (62%), Gaps = 1/120 (0%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+ AEIVR+ + ++ +GQ EAA ALG+ + +   L+++PQ++R ++P + ++++ +LK
Sbjct: 228 SGAYCAEIVRAAIQSIDKGQYEAAKALGMNYSQTMSLIVIPQSIRRMLPAICNEFIMVLK 287

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SL  A+   D+ ++  +I+N  G  I + +  + IYL ++       N++  K ++ E
Sbjct: 288 DASLVFAISLMDITTISNSIMNSDGSYI-VFIPALIIYLIITAFFTYIFNKIEKKFSVYE 346


>gi|42779547|ref|NP_976794.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42735463|gb|AAS39402.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 290

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 149 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 208

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 209 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 268

Query: 391 KIALKE 396
           ++  KE
Sbjct: 269 RLQRKE 274


>gi|331008515|gb|EGH88571.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 220

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|300313889|ref|YP_003777981.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076674|gb|ADJ66073.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 277

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 76/120 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  +A+    AA+ AEI+R+GL +VPRGQ+EAA  LGL+  +    V+L  A+  +
Sbjct: 88  PTFAAAVLAMIINIAAYAAEIIRAGLDSVPRGQIEAAQCLGLSVWRIRWHVMLQPAIERV 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P LTSQ+L +++ S++A  +   +L ++  T+ + T +++E  L+   +YL L+I++ L
Sbjct: 148 YPALTSQFLLMMQASAMASQISAEELTAIANTVQSDTFRSLETYLVVAALYLVLAILVKL 207



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGA----GRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           F++  WL       A I+G  +G      + S ++ +A  C  Y+EV RN P LV IF L
Sbjct: 17  FLHGAWLTLKMTTLAVIVGVAIGIFVAFAKNSPHRWLARGCSAYIEVVRNTPFLVQIFLL 76

Query: 149 Y 149
           Y
Sbjct: 77  Y 77


>gi|168756599|ref|ZP_02781606.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168767315|ref|ZP_02792322.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189356223|gb|EDU74642.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363604|gb|EDU82023.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|326693349|ref|ZP_08230354.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 481

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 23/179 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP L  + +                       P F +  I L   
Sbjct: 326 RGLPLMVLAFFIYIGLPGLTGVKI-----------------------PAFTAGIITLILN 362

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    V  G  AV RGQMEAA +LGL++ +A R V++PQ +R ++P   +Q++  LK
Sbjct: 363 EGAYTGAFVCGGFEAVNRGQMEAARSLGLSYSQAMRRVVMPQGLRIMVPSFINQFIITLK 422

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++S+  A+G  +L   G  I+ +  Q   +  I   +YL L  ++  F   +  ++  K
Sbjct: 423 DTSILSAIGLLELTQTGSLIVARNSQGFRVWAIIGVMYLILITLLTWFSRWVEKRMTAK 481


>gi|300790863|ref|YP_003771154.1| amino acid ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299800377|gb|ADJ50752.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 254

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 80/131 (61%), Gaps = 5/131 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   AA+I EI RSG+ +V +GQMEA+ ALG+++ K+  LV++PQ +R ++P L +Q
Sbjct: 103 LALSLIAAAYIGEIFRSGIQSVDKGQMEASRALGMSYTKSMLLVIIPQGVRRVLPALVNQ 162

Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ L+K+SSL   +G      +L  +G  +   TG    ++   +F +L +++ +   +N
Sbjct: 163 FIALVKDSSLVYVLGLLSGQRELFRIGQDLAANTGNLSPLVAAGVF-FLVITVPLTHLVN 221

Query: 387 RLNAKIALKEK 397
            ++ K+    K
Sbjct: 222 YIDKKLRTGRK 232



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 82  DSSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           D  Y + +L      G +NT  L+ S  +  T++G ++    LS    + W  R+Y ++F
Sbjct: 10  DWDYISQVLPDLLKTGLLNTLILSVSSALIGTVVGMVLAVMGLSTKWWLRWPARIYTDIF 69

Query: 137 RNIPPLVVIFF-------LYKSVLSVLPIP 159
           R +P ++ I         L + V+   P P
Sbjct: 70  RGLPAILTILLIGQGLGTLARDVVGTNPYP 99


>gi|296272119|ref|YP_003654750.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096294|gb|ADG92244.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 359

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 15/172 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LTM   +   V SF +GI+ +L      R  +    K + +LYI    I G+P + L+  
Sbjct: 155 LTMVVASVGIVVSFPIGIIFAL-----GRQSNMPIIKTISVLYIE--FIRGVPLITLL-- 205

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                F   V+    F  G T   + +   I ++ + AA++AE+VR GL A+P+GQ EAA
Sbjct: 206 -----FMSSVILPLFFPEGVTFD-KLLRALIGVTLFQAAYLAEVVRGGLQAIPKGQYEAA 259

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            ++GL++ +A  LV+LPQA++  IP +   ++ L K+++L + +G  D++++
Sbjct: 260 DSVGLSYWQAMGLVILPQALKISIPNIVGSFVALFKDTTLVLIIGLFDVLAM 311


>gi|221209883|ref|ZP_03582864.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
 gi|221170571|gb|EEE03037.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
          Length = 500

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 10/182 (5%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           + LG++L  F   L+R  H+   K    +YI  F    LP LVL+   Y L    P    
Sbjct: 32  WALGVLLG-FPVALARQSHQPALKRAAAVYIWFFR--SLPLLVLLVFIYNLPQVFPATS- 87

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                 + +S  F +  IA+     A+ AEI R G+++VPRGQ+EA  ALG+      R+
Sbjct: 88  ------AVLSDPFTAGLIAMVFSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRM 141

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQA+R  +P L ++++ ++K +SL   +  A+++ VG  +  Q     E +L   F 
Sbjct: 142 IVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFY 201

Query: 374 YL 375
           Y+
Sbjct: 202 YV 203


>gi|254473824|ref|ZP_05087219.1| ABC-type glutamine transport system, permease component
           [Pseudovibrio sp. JE062]
 gi|211957210|gb|EEA92415.1| ABC-type glutamine transport system, permease component
           [Pseudovibrio sp. JE062]
          Length = 248

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 12/171 (7%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             K G A    Y+   ++  +P+LVLI   + +++  PV+   +          F +  +
Sbjct: 75  DNKFGLAFNRTYVE--VVRSVPSLVLI---FWVYYGLPVVANISI-------NVFWAGVL 122

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +AF AEI R+G+ +V +GQ+EA  +LGL++ +  R ++LPQA+R ++PPL +Q 
Sbjct: 123 ALALSDSAFQAEIFRAGIQSVDKGQIEAGHSLGLSYFQRLRFIILPQAIRRMLPPLGNQL 182

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           + +LK SSL   +G  DL      ++    + +EI  + +  YL L ++++
Sbjct: 183 VYMLKMSSLVSVIGLQDLTRRANELVVTEYRPLEIYTVLVLEYLVLILIVS 233



 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++ + +  + ++G  V    LS NK      R YVEV R++P LV+IF++
Sbjct: 43  MIAGLQETISVSLTAIAISMLVGLFVALPGLSDNKFGLAFNRTYVEVVRSVPSLVLIFWV 102

Query: 149 Y 149
           Y
Sbjct: 103 Y 103


>gi|218779109|ref|YP_002430427.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfatibacillum alkenivorans AK-01]
 gi|218760493|gb|ACL02959.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfatibacillum alkenivorans AK-01]
          Length = 267

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 93/166 (56%), Gaps = 16/166 (9%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G+P LV      QL +    LG+F  +      P+ ++  IA+S    A++ E+ R+
Sbjct: 109 IVRGIPLLV------QLFYLYYALGKFIQV------PDKLAAIIAMSICYGAYMGEVFRA 156

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQ EAA +LG    +    V+LPQA R+I+PP+ ++++ LLK++SL   +G A
Sbjct: 157 GIDSIDKGQTEAARSLGFNGAQTMMYVILPQAWRTILPPVGNEFIALLKDTSLVSILGVA 216

Query: 348 DLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389
           DL+  G    + +    E    + ++++ I L LS ++++   RL 
Sbjct: 217 DLLRRGREYASTSFDYFETYTMVAVVYLIITLILSKLVSIMEERLG 262



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 40/70 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF + FS ++ A IIG   G GRLS   +V  +   YVE+ R IP LV +F+LY +
Sbjct: 66  GIYVTFQVTFSSILLAIIIGFFTGLGRLSKIWIVNILASTYVEIVRGIPLLVQLFYLYYA 125

Query: 152 VLSVLPIPDH 161
           +   + +PD 
Sbjct: 126 LGKFIQVPDK 135


>gi|307130609|ref|YP_003882625.1| glutamine ABC transporter membrane protein [Dickeya dadantii 3937]
 gi|306528138|gb|ADM98068.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 74/118 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++ +G  EA +ALGL+HR   R V+ P A+R ++PPL +Q++  +K
Sbjct: 101 SGAYIAEITRGAVLSIHKGFTEAGLALGLSHRATLRHVITPLALRRMLPPLGNQWIISIK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G ++L      II    +A+EI+     IYL +++++ + M  L  ++ +
Sbjct: 161 DTSLCIVIGVSELTRQAQEIIAGNFRALEILTATAIIYLVITLVLTIGMRWLERRLKI 218


>gi|300933045|ref|ZP_07148301.1| glutamate transporter permease protein GluD [Corynebacterium
           resistens DSM 45100]
          Length = 312

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 11/137 (8%)

Query: 220 PLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           P+ ++ T ++     +P L+L+   YQ      V   +  +   T    F ++   L+ Y
Sbjct: 101 PVRWLCTIIVEFFRAIPVLLLMIFAYQ------VFAIYGLV--PTKHLAFGAVVFGLTMY 152

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             + IAEI+RSG+ A+P GQ EAAIALGL+ R+    +LLPQA+ S++P L SQ +  LK
Sbjct: 153 NGSVIAEILRSGIRALPAGQEEAAIALGLSRRQTMFKILLPQAVASMLPALISQMVIALK 212

Query: 337 NSSLAVAVGFADLVSVG 353
           +S+L   +G+ ++V  G
Sbjct: 213 DSALGYLIGYVEVVRSG 229



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 42/73 (57%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+ +   + T IL G   T   A   +I A I+GT++G GRLS    V W+C + VE FR
Sbjct: 55  PFLTGDMWTTYILPGLWGTLKAAVVSIILAIIVGTVLGLGRLSVVAPVRWLCTIIVEFFR 114

Query: 138 NIPPLVVIFFLYK 150
            IP L+++ F Y+
Sbjct: 115 AIPVLLLMIFAYQ 127


>gi|145224551|ref|YP_001135229.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145217037|gb|ABP46441.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium gilvum PYR-GCK]
          Length = 226

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 6/140 (4%)

Query: 263 SPEFMS------LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           SP F++        + L+ YTA+F+ E VR+G+  +P GQ EAA +LGLT  +  R+VLL
Sbjct: 87  SPTFIADSGFRLAVLGLTVYTASFVCETVRAGVNTIPLGQAEAARSLGLTFGQNLRIVLL 146

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA R+++ PL S  + L KN+++A A+G A+   +   +I  T   + +  I+   ++ 
Sbjct: 147 PQAFRAVVIPLGSVLIALTKNTTIASAIGVAEAALLMKEMIENTAAVLVVGGIFALGFVI 206

Query: 377 LSIMIALFMNRLNAKIALKE 396
           L++ + L    L  ++A+  
Sbjct: 207 LTLPLGLVFGWLGKRLAVAR 226



 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y   I   F  T  L     I A ++GT++ A RL+   ++ WI   YV + RN P  
Sbjct: 5   TEYREEIFAAFWTTVQLTVLSAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNLVRNTPLT 64

Query: 143 VVIFF 147
           ++I F
Sbjct: 65  LIILF 69


>gi|93005160|ref|YP_579597.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92392838|gb|ABE74113.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 241

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 22/202 (10%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-- 254
           G+VL+L   RLS+++     +  P LYI  F   G P LV I L Y        LGQF  
Sbjct: 37  GLVLALL--RLSKNW---VVQIFPFLYI--FFFRGTPLLVQIFLIYY------GLGQFEA 83

Query: 255 ---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              +F+    +S  +    IA +  T+A++AEI+R  +  +P G++EAA A+G++  +  
Sbjct: 84  VRNSFLWEPVLSQAYWCAIIAFTLNTSAYLAEIIRGAIQNIPVGELEAADAIGMSKWQKL 143

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             + LP+A   +IP  +++ + +LK S+LA  +   D+  V  TI  +T   +E+     
Sbjct: 144 TRITLPRAFGIVIPAYSNEVIFMLKGSALASTIALMDITGVARTISARTYTLMELFFAAG 203

Query: 372 FIYLSLSIMI----ALFMNRLN 389
            +YL LS +I     +F  R+N
Sbjct: 204 IVYLLLSWVILFSFRMFEKRMN 225


>gi|308186173|ref|YP_003930304.1| ABC transport system permease protein [Pantoea vagans C9-1]
 gi|308056683|gb|ADO08855.1| putative ABC transport system permease protein [Pantoea vagans
           C9-1]
          Length = 246

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 24/221 (10%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245
           +F+ +F+ G VL+  + A R+SR       + L        L+F G P ++ + L Y   
Sbjct: 24  LFISAFLCGGVLAVGILALRMSRW------RGLSAFARGYILVFRGSPLMIQLFLIYY-- 75

Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                LGQF  I  S   P     F    +ALS  TAA+ AEI+R  L+AVP GQ+EA +
Sbjct: 76  ----GLGQFGVIRHSIFWPFLREPFTCAVLALSLCTAAYTAEILRGALLAVPPGQVEAGM 131

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T 
Sbjct: 132 ACGMSRGLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTY 191

Query: 362 QAIEIILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398
           + +E+ L    IYL L+ +I    AL   RL   +   EKK
Sbjct: 192 RTMEVFLCAAAIYLILNFIIVQLYALLERRLT-PVHKPEKK 231


>gi|227325816|ref|ZP_03829840.1| amino-acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 223

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 21/221 (9%)

Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           FP + M     +F+      F+ VLG++L+L      R         +  LYIS F   G
Sbjct: 12  FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYISLFR--G 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P+LV +   + ++F  P L    F G S +     ++ I  S  T+A++AEI R+GL +
Sbjct: 65  IPSLVQL---FIIYFGLPQL----FPGLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLAS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+G ++L +
Sbjct: 117 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  I  ++ +  E  L+   IY  + I+ +    +L  K+
Sbjct: 177 EGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKL 217


>gi|190894702|ref|YP_001984995.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700363|gb|ACE94445.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 220

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 24/180 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +  F  F LP       +  L  DK                   S  + LS Y
Sbjct: 65  RNLPILVLVLFAFFALP-------QMGLRLDK-----------------MKSFVLVLSLY 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AE+ R+GL+++PRG  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K
Sbjct: 101 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SLA A+   +L      I  ++ + IE  ++   +Y++   +IA  M  +  ++AL  
Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR 220


>gi|167766046|ref|ZP_02438099.1| hypothetical protein CLOSS21_00539 [Clostridium sp. SS2/1]
 gi|317498083|ref|ZP_07956386.1| binding-protein-dependent transport system inner membrane component
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167712126|gb|EDS22705.1| hypothetical protein CLOSS21_00539 [Clostridium sp. SS2/1]
 gi|291560004|emb|CBL38804.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SSC/2]
 gi|316894671|gb|EFV16850.1| binding-protein-dependent transport system inner membrane component
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 225

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 108/203 (53%), Gaps = 16/203 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG +L+L   RL+     K+     + Y+   +I G PTL  + + Y +       GQ  
Sbjct: 39  LGTILALM--RLTAEQKGKSTLLSKIAYVYIDIIRGTPTLTQLMIMYFVILK----GQNG 92

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            + GS          +     +AA++AEI+R+G+ AV +GQME   +LGL++ +  + ++
Sbjct: 93  LLVGS----------LTFGLNSAAYVAEIIRAGIQAVDQGQMEGGRSLGLSYVQTMKDII 142

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+++I+P L ++++ L+K +S+   V   DL  V   +I++  +A+  +L    IY 
Sbjct: 143 LPQAIKNILPALGNEFIVLIKETSILGYVAIVDLTKVSDFVISRIFEALAPLLGTALIYY 202

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++ L +N L  ++   +++
Sbjct: 203 VIVKILTLGLNALERRLRQSDRR 225


>gi|146342964|ref|YP_001208012.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp.
           ORS278]
 gi|146195770|emb|CAL79797.1| glutamate/aspartate ABC transporter (permease protein)
           [Bradyrhizobium sp. ORS278]
          Length = 243

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 75/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +  + +A +A  + +G+ ++PRGQ  AA ALGLT  +  R VLLP A R I+P
Sbjct: 108 FFTAAVGIGLFMSARVAVQLAAGIGSLPRGQKMAATALGLTTLQVYRYVLLPMAFRIILP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN +KNS++A+ +G  +L      +   + Q  E       +YL ++I++ + M
Sbjct: 168 PLTSEFLNTVKNSAVAITIGLIELTGAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGM 227

Query: 386 NRLNAKIAL 394
             L   +A+
Sbjct: 228 RLLERAVAI 236



 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           T   +Y   +L G   T   + S  + A I GT+VG  R   +KL  WI  +YVE FRN+
Sbjct: 16  TGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKLAGWIGFLYVEFFRNM 75

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV +F  +  +  +LP
Sbjct: 76  PLLVQLFLWFFVLPELLP 93


>gi|15600348|ref|NP_253842.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|107104255|ref|ZP_01368173.1| hypothetical protein PaerPA_01005329 [Pseudomonas aeruginosa PACS2]
 gi|116053302|ref|YP_793626.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894255|ref|YP_002443124.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238142|ref|ZP_04931465.1| hypothetical protein PACG_04264 [Pseudomonas aeruginosa C3719]
 gi|296392009|ref|ZP_06881484.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|313110216|ref|ZP_07796113.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter membrane protein [Pseudomonas aeruginosa
           39016]
 gi|9951456|gb|AAG08540.1|AE004928_6 amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|115588523|gb|ABJ14538.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170073|gb|EAZ55584.1| hypothetical protein PACG_04264 [Pseudomonas aeruginosa C3719]
 gi|218774483|emb|CAW30300.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310882615|gb|EFQ41209.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter membrane protein [Pseudomonas aeruginosa
           39016]
          Length = 230

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 104/190 (54%), Gaps = 15/190 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L + L L   R SRH++ +   A+P  YI  F   G P L+      QL      L QF 
Sbjct: 33  LALALPLGIARASRHWYVR---AVPYAYI--FFFRGTPLLL------QLFIVYYGLAQFE 81

Query: 256 FIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +  S   P     Y    + ++ +TAA+IAEI+R  + +VP G++EAA ALG++ R+A 
Sbjct: 82  EVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEAARALGMSRRQAL 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LP+A+R  +P  +++ + +LK S++   V   D++ +  TII +T +++    +  
Sbjct: 142 WHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTLFDIMGMARTIIARTYESMLFFCLAG 201

Query: 372 FIYLSLSIMI 381
            +YL ++I++
Sbjct: 202 ALYLVITIVL 211


>gi|323438846|gb|EGA96583.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           O11]
          Length = 467

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 77/124 (62%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA + GL +R+  + V++PQA+++I+P L ++
Sbjct: 342 IALVINSSAYIAEIIRAGINAVDKGQMEAARSFGLNYRQTMKSVIMPQAIKNILPALGNE 401

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---- 386
           ++ L+K SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN    
Sbjct: 402 FVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEG 461

Query: 387 RLNA 390
           RLNA
Sbjct: 462 RLNA 465



 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKVISWIASIYIEILRGTPML 316

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 317 VQVFIVF 323


>gi|91778283|ref|YP_553491.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690943|gb|ABE34141.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 251

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 83/147 (56%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +GQF  I  S + P     +M   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  MGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ +I   +  L  +++
Sbjct: 198 FICAALIYLFLNFVIVRLLGLLETRLS 224


>gi|116491604|ref|YP_811148.1| ABC-type amino acid transport system, permease component
           [Oenococcus oeni PSU-1]
 gi|290891211|ref|ZP_06554273.1| hypothetical protein AWRIB429_1663 [Oenococcus oeni AWRIB429]
 gi|116092329|gb|ABJ57483.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Oenococcus oeni PSU-1]
 gi|290479175|gb|EFD87837.1| hypothetical protein AWRIB429_1663 [Oenococcus oeni AWRIB429]
          Length = 214

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 14/180 (7%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            KT   +   YI  F    +P L+++   Y       V+ +   IGG T         I 
Sbjct: 45  SKTANVIARAYIEVFR--NIPLLIIVMFFYL------VVTKIVKIGGFTAGT------IG 90

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ YT+AFIAE VR+G+ +V  GQ E A A GL+  +  R+++LPQA +  IP L +Q++
Sbjct: 91  LTLYTSAFIAETVRAGINSVGIGQTEGARANGLSSWQTLRIIILPQAFKIAIPSLGNQFI 150

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NL+KNSS+   V   DL+     +   T  +    +I    YL +++ +  +M  L  K+
Sbjct: 151 NLVKNSSILAFVAGGDLMYTANNVAATTFDSFNSYIIVGIFYLIITLPLNYYMKFLETKL 210



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 39/69 (56%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LV F  T   +   +I +T++GTL    ++  +K    I R Y+EVFRNIP L+++ F Y
Sbjct: 13  LVAFGYTLLSSIIALIASTVLGTLFAILQIVPSKTANVIARAYIEVFRNIPLLIIVMFFY 72

Query: 150 KSVLSVLPI 158
             V  ++ I
Sbjct: 73  LVVTKIVKI 81


>gi|302866035|ref|YP_003834672.1| polar amino acid ABC transporter inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|302568894|gb|ADL45096.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
          Length = 291

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 61/92 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +L I L+ Y  + +AEI R+G+ AVP GQ E A A+G+   +  RL+LLPQA RS++
Sbjct: 136 KFWALVIGLTLYNGSVLAEIFRAGINAVPYGQSEGAYAIGMRKNQVLRLILLPQAFRSML 195

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           P + SQ + LLK+++L   + + +L+ VG  I
Sbjct: 196 PAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227


>gi|239831567|ref|ZP_04679896.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239823834|gb|EEQ95402.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 387

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T L++LPQA++ +IP + + 
Sbjct: 255 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLIILPQALKLVIPGIVNT 314

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 315 FIGLFKDTSLVYIIGMFDLLGI 336


>gi|170769014|ref|ZP_02903467.1| glutamine ABC transporter, permease protein [Escherichia albertii
           TW07627]
 gi|170122086|gb|EDS91017.1| glutamine ABC transporter, permease protein [Escherichia albertii
           TW07627]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGL-AAGFARTFGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|157368268|ref|YP_001476257.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320032|gb|ABV39129.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 246

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 81/135 (60%), Gaps = 1/135 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G+ A+  GQ +A ++LGLT  +  R+++LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIAAIGPGQWQAGLSLGLTRWQTLRMIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y    + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFIALVYFVFCLALD 213

Query: 383 LFMNRLNAKIALKEK 397
           L  N +N + + + +
Sbjct: 214 LLANAVNRRFSPQTR 228


>gi|85704885|ref|ZP_01035986.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. 217]
 gi|85670703|gb|EAQ25563.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. 217]
          Length = 218

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 73/127 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IA   + AA+ +EI+R+G+ +V  GQ+ A  A GL + +  R ++LPQA R++IP
Sbjct: 90  FYSALIAFVMFEAAYYSEIMRAGIQSVRTGQVHAGQATGLGYWQVQRYIVLPQAFRNMIP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q + L +++SL   V   DL++    +    G+ +E+ L    +Y  +    +LF+
Sbjct: 150 ILVTQGIILFQDTSLVFVVSLRDLMTASSIVARTEGRLVEMYLFAALVYFVICFAGSLFV 209

Query: 386 NRLNAKI 392
            RL A++
Sbjct: 210 RRLQARM 216



 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   + WL F  ++   ++GTL+   RLS  K +A     YV + R++P ++VIF+ Y
Sbjct: 19  GLQLSLWLTFLAVLGGVVLGTLLALARLSGIKPLALFAAAYVNLIRSVPLILVIFWFY 76


>gi|326382647|ref|ZP_08204338.1| abc transporter integral membrane subunit [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326198766|gb|EGD55949.1| abc transporter integral membrane subunit [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 313

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 4/130 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   AA++AEIVR+G+ +V  GQMEA++ALG++  +  R  +LPQAMR IIPP  ++
Sbjct: 163 IGLALNEAAYMAEIVRAGISSVGEGQMEASVALGMSWWQTMRRTVLPQAMRVIIPPTGNE 222

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMN 386
            +++LK +SL  AV F+ +L      I     Q I ++L+   W  +  S+ ++   F+ 
Sbjct: 223 VISMLKTTSLVAAVPFSLELYGRSRDISGVNFQPIPMLLVASTWYLVVTSILMVGQHFVE 282

Query: 387 RLNAKIALKE 396
           +   K A +E
Sbjct: 283 KHYEKGASRE 292


>gi|315444882|ref|YP_004077761.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|315263185|gb|ADT99926.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 226

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 81/140 (57%), Gaps = 6/140 (4%)

Query: 263 SPEFMS------LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           SP F++        + L+ YTA+F+ E VR+G+  +P GQ EAA +LGLT  +  R+VLL
Sbjct: 87  SPTFIADSGFRLAVLGLTVYTASFVCETVRAGVNTIPLGQAEAARSLGLTFGQNLRIVLL 146

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA R+++ PL S  + L KN+++A A+G A+   +   +I  T   + +  I+   ++ 
Sbjct: 147 PQAFRAVVIPLGSVLIALTKNTTIASAIGVAEAALLMKEMIENTAAVLVVGGIFALGFVI 206

Query: 377 LSIMIALFMNRLNAKIALKE 396
           L++ + L    L  ++A+  
Sbjct: 207 LTLPLGLVFGWLGKRLAVAR 226



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 13/112 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y   I   F  T  L     I A ++GT++ A RL+   ++ WI   YV + RN P  
Sbjct: 5   TEYREEIFAAFWTTVQLTVLSAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNLVRNTPLT 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           ++I F               +    GM L +R    PT   D+  ++ V   
Sbjct: 65  LIILFC-----------SFGLAQTLGMTLADR--QSPTFIADSGFRLAVLGL 103


>gi|304395807|ref|ZP_07377690.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357101|gb|EFM21465.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 246

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 112/220 (50%), Gaps = 22/220 (10%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +F+ +F+ G VL+  + A R+SR    +   A    YI  F   G P ++ + L Y    
Sbjct: 24  LFISAFLCGGVLAVGILALRMSRW---RLLSAFARGYILVFR--GSPLMIQLFLIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
               LGQF  I  S   P     F    +ALS  TAA+ AEI+R  L+AVP GQ+EA +A
Sbjct: 76  ---GLGQFGVIRHSVFWPFLREPFTCAVLALSLCTAAYTAEILRGALLAVPPGQVEAGMA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T +
Sbjct: 133 CGMSRGLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYR 192

Query: 363 AIEIILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398
            +E+ L    IYL L+ +I    AL   RL   +   EKK
Sbjct: 193 TMEVFLCAAAIYLILNFIIVQLYALLERRLT-PVHKPEKK 231


>gi|240168771|ref|ZP_04747430.1| ABC transporter permease protein GlnQ [Mycobacterium kansasii ATCC
           12478]
          Length = 599

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 13/171 (7%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +  GLP +V+I +          LG    +GG T +  +     AL     A++ EI+
Sbjct: 413 TDIFRGLPEVVIILIIG--------LGVGPIVGGLTNNNPYPLGIAALGLMAGAYVGEIL 464

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V  GQ+EAA ALG ++  A RLV++PQ +R ++P L +Q++ LLK S+L   +G
Sbjct: 465 RSGIQSVDPGQLEAARALGFSYSAAMRLVVVPQGIRRVLPALVNQFIALLKASALVYFLG 524

Query: 346 FA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 +L  +G  +  QTG    ++   +F YL L+I +   +N ++AK+
Sbjct: 525 LVAKQRELFQIGRDLNAQTGNLSPLVAAGIF-YLLLTIPLTHLVNYIDAKL 574


>gi|328956551|ref|YP_004373937.1| glutamine transport system permease protein GlnP [Carnobacterium
           sp. 17-4]
 gi|328672875|gb|AEB28921.1| glutamine transport system permease protein GlnP [Carnobacterium
           sp. 17-4]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 3/124 (2%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +LG    I GST+    +   IAL  YTAA +AEIVR GL ++P+GQ EAA + G +  +
Sbjct: 73  MLGCAFLIPGSTI---LVKASIALFLYTAAVVAEIVRGGLNSIPKGQFEAAHSQGFSFFQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQ  + IIP L SQ +  +K++S    +G  +    G  I+ +  +  E+ LI
Sbjct: 130 TLVYIILPQTFKKIIPSLLSQVITTIKDTSFLAGLGIMEFTRSGQVILGKVTKTSEVFLI 189

Query: 370 WMFI 373
           + F+
Sbjct: 190 YGFL 193


>gi|302539757|ref|ZP_07292099.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302457375|gb|EFL20468.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces himastatinicus ATCC 53653]
          Length = 316

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 7/156 (4%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTAA 279
           +L  G P LV +   Y L    P +G     G + V  E         +  + L  + AA
Sbjct: 115 WLFRGTPLLVQLLFWYFLSAIVPTIGLGVPWGPTFVEAETNVLITQLTAAVLGLGLHEAA 174

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AEIVR+G+ +V  GQ EAA ALG++  +  R ++LPQA+R IIPP  +Q +++LK +S
Sbjct: 175 YMAEIVRAGITSVDDGQSEAAQALGMSRGQTLRRIVLPQALRIIIPPTGNQAISMLKTTS 234

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L  A+   +L++    I ++  Q + ++++  F YL
Sbjct: 235 LVFAIAVPELLTSIQGIYSRNFQQVPLLVVACFWYL 270


>gi|148926584|ref|ZP_01810266.1| putative amino acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145845278|gb|EDK22372.1| putative amino acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 181

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 77/114 (67%), Gaps = 10/114 (8%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 57  LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 116

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFIYLSLSI 379
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+      II   +  Y+S+ I
Sbjct: 117 FISLFKETSV---VGFISVIDI--TMQSQSLQAVLYNPKPIIFTGLVYYVSVKI 165


>gi|300715979|ref|YP_003740782.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           [Erwinia billingiae Eb661]
 gi|299061815|emb|CAX58931.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           [Erwinia billingiae Eb661]
          Length = 290

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 100/171 (58%), Gaps = 4/171 (2%)

Query: 231 GLPTLVLIALKYQLHFDKPVL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           G P ++ + L + L    PV+   G F+    + ++P F++  + LS    A+ +E+VR+
Sbjct: 119 GTPLILQLLLWFNLALVFPVIAIPGVFSVETVNVMTP-FVAALLGLSINQGAYTSEVVRA 177

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL++V  GQ EAA ++G+   +A + ++LPQAMR I+PP+ +++++++K +SLA  + ++
Sbjct: 178 GLLSVDTGQYEAAKSIGMPRLQALQRIILPQAMRVILPPVGNEFISMIKTTSLASMIQYS 237

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+     I     + +E++ +    YL +  +++   +RL    +  +++
Sbjct: 238 ELLYNTQNIYYANARVMELLFVAGIWYLIIVTVLSFGQSRLERYFSRGQRR 288


>gi|294637082|ref|ZP_06715396.1| glutamine ABC transporter, permease protein [Edwardsiella tarda
           ATCC 23685]
 gi|291089710|gb|EFE22271.1| glutamine ABC transporter, permease protein [Edwardsiella tarda
           ATCC 23685]
          Length = 218

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 100/191 (52%), Gaps = 12/191 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A   +R F       + L++I   LI G P +V +   Y   F  P++          + 
Sbjct: 39  AAGFARAFGGWLSNHVALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLR------ID 87

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V++P A+R +
Sbjct: 88  P-FTAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRYVIMPLALRRM 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++ 
Sbjct: 147 LPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSF 206

Query: 384 FMNRLNAKIAL 394
            + RL  ++ +
Sbjct: 207 VLRRLERRLKI 217


>gi|282857320|ref|ZP_06266557.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyramidobacter piscolens W5455]
 gi|282584820|gb|EFB90151.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyramidobacter piscolens W5455]
          Length = 277

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 12/176 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y S F   G P +V + L Y   F  P L  +         P F ++ +     +AA+++
Sbjct: 114 YTSVFR--GTPLMVQLFLVY---FATPQLFDYQI-------PAFNAVVLTFGLNSAAYVS 161

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R G+ ++  GQ EAA+ALG+ +R     +++PQA+R+++P L ++ + LLK++S+  
Sbjct: 162 EILRGGIQSIDVGQREAAMALGVPYRAMMFDIVIPQALRTVLPSLVNELIALLKDTSIVA 221

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  D++    T +N T  A E  ++   +Y  L ++     +RL  ++   ++ 
Sbjct: 222 TIGMLDMMRAAQTAMNSTYLAFEPFIVVAGMYYVLVMIFTAVASRLERRLHKSDRN 277



 Score = 36.6 bits (83), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +N+  + F  +I  +I GT++   ++S    ++W    Y  VFR  P +V +F +Y +
Sbjct: 74  GMINSLEVTFMSVIMGSICGTVLALLKVSRLGPLSWFATAYTSVFRGTPLMVQLFLVYFA 133

Query: 152 VLSVLP--IPD-HSIVLPFGM 169
              +    IP  +++VL FG+
Sbjct: 134 TPQLFDYQIPAFNAVVLTFGL 154


>gi|229120015|ref|ZP_04249270.1| Amino acid ABC transproter, permease [Bacillus cereus 95/8201]
 gi|228663481|gb|EEL19066.1| Amino acid ABC transproter, permease [Bacillus cereus 95/8201]
          Length = 233

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + ++ RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 92  IALAIHNGAYITEIFRGSIQSIDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 152 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 211

Query: 391 KIALKE 396
           ++  KE
Sbjct: 212 RLQRKE 217


>gi|58336459|ref|YP_193044.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM]
 gi|58253776|gb|AAV42013.1| putative glutamine ABC transporter [Lactobacillus acidophilus NCFM]
          Length = 537

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 73/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++
Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNE 450

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N
Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E        T+   Y   I+ G   T  LA  G I    IG LVG           
Sbjct: 280 KAGNETKNENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTR 339

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A   V W+  VYVE+FR  P +V    +Y
Sbjct: 340 GKRWALNFVKWLLSVYVEIFRGTPMMVQAAVIY 372


>gi|269962689|ref|ZP_06177034.1| amino acid ABC transproter, permease protein [Vibrio harveyi 1DA3]
 gi|269832612|gb|EEZ86726.1| amino acid ABC transproter, permease protein [Vibrio harveyi 1DA3]
          Length = 223

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+      VFS +L ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F F+ G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQI--FPFMVGIDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|207723708|ref|YP_002254106.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206588912|emb|CAQ35874.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 230

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 82/136 (60%), Gaps = 5/136 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++  AL  +  A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+LPQA+R+++
Sbjct: 94  QFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVILPQALRNML 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL----VSVGGTIINQTGQAIEIILIWMFIY-LSLSI 379
           P L +Q ++ +K +SL   +   ++      +   ++ ++ +   ++ +  F+    L+ 
Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEVSFITTQISTAVMTKSAETYGLLALSYFVMCFGLTR 213

Query: 380 MIALFMNRLNAKIALK 395
              L   RL A+ A K
Sbjct: 214 CAYLLERRLAARAASK 229


>gi|194015816|ref|ZP_03054431.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Bacillus pumilus ATCC 7061]
 gi|194012171|gb|EDW21738.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Bacillus pumilus ATCC 7061]
          Length = 230

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 81/135 (60%), Gaps = 6/135 (4%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+ P + S  IA S    A+ +EI+R+ +++VP+GQ EA  ++G+THRK    V+LPQA+
Sbjct: 93  TLDP-YPSAIIAFSLNVGAYASEIIRASVLSVPKGQWEAGYSIGMTHRKTLVRVILPQAV 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSL 377
           R  IPPL++ +++L+K++SLA  +  A+L      I        +I+ I+M    IY   
Sbjct: 152 RVSIPPLSNSFISLVKDTSLASQILVAELFRKSQEI--AAANLDQILFIYMEAALIYWVF 209

Query: 378 SIMIALFMNRLNAKI 392
             +++L  +++  ++
Sbjct: 210 CFILSLVQHQIEKRL 224


>gi|170701275|ref|ZP_02892241.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170133798|gb|EDT02160.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 248

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S V P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFVWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAALIYLGLNFIVVRLLGALEWRLS 224


>gi|227515553|ref|ZP_03945602.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus fermentum ATCC 14931]
 gi|227085983|gb|EEI21295.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus fermentum ATCC 14931]
          Length = 227

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 6/171 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P+++ + L Y L      L Q   +G        +   IAL   + A+ AEI RS
Sbjct: 58  IVRGTPSMIQVMLIYYLLARSLPLPQTQILGSGL--DRIIPGAIALGLNSGAYTAEIFRS 115

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF- 346
           G+I++P GQ EA ++LGL+ ++    ++LPQA+R+++P + ++++ L+K SS+   +G  
Sbjct: 116 GIISIPAGQTEAGLSLGLSQKETMFSIVLPQALRNVLPAMGNEFITLIKESSVLFYIGVQ 175

Query: 347 ---ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              A+ + VGGT+ N     +   +I+  +  +++ ++     R+ AK  L
Sbjct: 176 EITAEALGVGGTLYNFIPPLLVAAVIYFILTQAMAQLLGWLERRMGAKYEL 226



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 31/56 (55%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           +IG L+   R+S  K ++WI R Y+ + R  P ++ +  +Y  +   LP+P   I+
Sbjct: 32  LIGLLMVLMRMSKVKPISWIARAYIAIVRGTPSMIQVMLIYYLLARSLPLPQTQIL 87


>gi|184155853|ref|YP_001844193.1| glutamate ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|183227197|dbj|BAG27713.1| glutamate ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
          Length = 229

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 6/171 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P+++ + L Y L      L Q   +G        +   IAL   + A+ AEI RS
Sbjct: 60  IVRGTPSMIQVMLIYYLLARSLPLPQTQILGSGL--DRIIPGAIALGLNSGAYTAEIFRS 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF- 346
           G+I++P GQ EA ++LGL+ ++    ++LPQA+R+++P + ++++ L+K SS+   +G  
Sbjct: 118 GIISIPAGQTEAGLSLGLSQKETMFSIVLPQALRNVLPAMGNEFITLIKESSVLFYIGVQ 177

Query: 347 ---ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              A+ + VGGT+ N     +   +I+  +  +++ ++     R+ AK  L
Sbjct: 178 EITAEALGVGGTLYNFIPPLLVAAVIYFILTQAMAQLLGWLERRMGAKYEL 228



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 31/56 (55%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           +IG L+   R+S  K ++WI R Y+ + R  P ++ +  +Y  +   LP+P   I+
Sbjct: 34  LIGLLMVLMRMSKVKPISWIARAYIAIVRGTPSMIQVMLIYYLLARSLPLPQTQIL 89


>gi|330875047|gb|EGH09196.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330965314|gb|EGH65574.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 220

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 73/129 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   +  R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|319650477|ref|ZP_08004617.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317397658|gb|EFV78356.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 233

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 106/200 (53%), Gaps = 14/200 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+ G+ L++F T L+R    K  + +  +Y+S   I G P LV +   + + +  P +G
Sbjct: 42  SFIFGLALAIF-TALARISGNKALETIAGIYVSA--IRGTPLLVQL---FIIFYGLPTIG 95

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    +   F S  I  S    A+ +EI+R+ ++++P+GQ EA  ++G+++ +  +
Sbjct: 96  --------VIIDPFPSAIIGFSLNVGAYSSEIIRAAILSIPKGQWEAGYSIGMSYSQTLK 147

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + + +     F
Sbjct: 148 RIILPQASRVSIPPLSNSFISLVKDTSLASMILVTEMFRRAQEIAATNYEFLLLYTQAAF 207

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           IY  +  M+++   RL  ++
Sbjct: 208 IYWVICFMLSILQGRLERRL 227


>gi|262173298|ref|ZP_06040975.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|261890656|gb|EEY36643.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
          Length = 265

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 16/159 (10%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFM 267
           R      G+AL   YI+  ++   P LV I L Y             F+ G  +    F 
Sbjct: 89  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLY-------------FVFGPVIGLDRFA 133

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+   +   V+LPQ ++  +PPL
Sbjct: 134 TAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFSFYDVILPQLLQRTLPPL 193

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           T++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 194 TNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|114706426|ref|ZP_01439328.1| polar amino acid ABC transport permease protein aapM-1 [Fulvimarina
           pelagi HTCC2506]
 gi|114538287|gb|EAU41409.1| polar amino acid ABC transport permease protein aapM-1 [Fulvimarina
           pelagi HTCC2506]
          Length = 497

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++ + +A++AE+VR GL A+P+GQ E A A+ L++ + TRL++LPQA++ +IP + + 
Sbjct: 365 VGVALFASAYMAEVVRGGLQAIPKGQYEGADAMALSYWQKTRLIILPQALKIVIPGIVNT 424

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL   +G ADL+ 
Sbjct: 425 FIGLFKDTSLVYIIGLADLLG 445


>gi|34556717|ref|NP_906532.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34482431|emb|CAE09432.1| PERMEASE OF ABC TRANSPORTER [Wolinella succinogenes]
          Length = 321

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 73/119 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+L+ +  A+IAE++R  + ++ +GQ EAA++LG+ + +   L+++PQA++  +P LT +
Sbjct: 193 ISLAIFYGAYIAEVLRGAIQSIDKGQQEAALSLGMNYFQTMTLIIIPQALKRSLPSLTGE 252

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + L+K+SSL   +   DL  VG  ++  T    E  ++   +Y +++  ++L  +RL 
Sbjct: 253 MIALIKDSSLVSVISVTDLTKVGREMVANTFSPFETWIVVAIMYFAITSSLSLLAHRLE 311


>gi|262277192|ref|ZP_06054985.1| ABC transporter permease component [alpha proteobacterium HIMB114]
 gi|262224295|gb|EEY74754.1| ABC transporter permease component [alpha proteobacterium HIMB114]
          Length = 243

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 23/150 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+PLL +  ++ +GLP +                       G + SP F+S  IALS  
Sbjct: 88  RAIPLLVLILWIYYGLPIMT----------------------GISFSP-FVSGIIALSIS 124

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF AEI R+G+ ++ + Q EA  +LGL   +  RLV+LPQA+++I+P + +Q++ +LK
Sbjct: 125 ESAFQAEIFRAGINSIKKSQWEAGSSLGLNFYRILRLVILPQAIKNILPAIGNQFVYVLK 184

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            SSL   +G  DL      ++  T + +EI
Sbjct: 185 MSSLVSIIGIGDLTRKANELVVTTYRPLEI 214


>gi|227114736|ref|ZP_03828392.1| amino-acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 223

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 21/221 (9%)

Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           FP + M     +F+      F+ VLG++L+L      R         +  LYIS F   G
Sbjct: 12  FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYISLFR--G 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P+LV +   + ++F  P L    F G S +     ++ I  S  T+A++AEI R+GL +
Sbjct: 65  IPSLVQL---FIIYFGLPQL----FPGLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLAS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+G ++L +
Sbjct: 117 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  I  ++ +  E  L+   IY  + I+ +    +L  K+
Sbjct: 177 EGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKL 217


>gi|205356386|ref|ZP_03223151.1| putative amino-acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345771|gb|EDZ32409.1| putative amino-acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 247

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|196034602|ref|ZP_03102010.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus W]
 gi|228944164|ref|ZP_04106543.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|195992645|gb|EDX56605.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus W]
 gi|228815553|gb|EEM61795.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 230

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|322832078|ref|YP_004212105.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167279|gb|ADW72978.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 109/206 (52%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V   V G+++ + A   +R F       + L++I   LI G P +V +   Y   F  
Sbjct: 25  ISVLGLVGGLIIGVIAG-FARAFGGWFSSNVALVFIE--LIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P++     +    + P F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R
Sbjct: 79  PMM-----VPDLRIDP-FSAAVVTIIINSGAYIAEITRGAVLSIHNGFREAGLALGLSRR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R +++P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ATLRYIIMPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               IYL +++ ++  + RL  K+ +
Sbjct: 193 AVAVIYLIITLALSFVLRRLERKLKI 218


>gi|284032616|ref|YP_003382547.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283811909|gb|ADB33748.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 289

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 42/210 (20%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLP 233
           T+       V + + G V +  A R+S H        F  +  +A+PLL +  F  +G  
Sbjct: 69  TLRAAGAATVLALIFGAVFA--AARISDHRWLRVPATFVVELFRAIPLLILMFFFYYG-- 124

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                +L+++L                 +SP F ++   L+ Y  + +AEI R+G+ AVP
Sbjct: 125 -----SLEFELG----------------LSP-FHAVVFGLTLYNGSVLAEIFRAGIAAVP 162

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA A GL   +  RLVLLPQA+R+++P + SQ + LLK+++L   + + +L+ V 
Sbjct: 163 KGQREAAYATGLRKNQVVRLVLLPQAIRAMLPAIVSQLVVLLKDTALGFIITYNELLYVA 222

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
                Q G  +E    + F Y+   I+IA+
Sbjct: 223 ----KQMGGRLE----FGFPYIPTYIVIAV 244



 Score = 39.7 bits (91), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G +NT   A +  + A I G +  A R+S ++ +       VE+FR IP L+++FF 
Sbjct: 62  LLTGLLNTLRAAGAATVLALIFGAVFAAARISDHRWLRVPATFVVELFRAIPLLILMFFF 121

Query: 149 YKSVL--SVLPIPDHSIVLPFGMFLNN 173
           Y   L   +   P H++V  FG+ L N
Sbjct: 122 YYGSLEFELGLSPFHAVV--FGLTLYN 146


>gi|159186075|ref|NP_356420.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159141209|gb|AAK89205.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 197

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 71/124 (57%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I LS   AA+++EIVR+G+ AVP+GQ+ AA A+G+T  +  R ++ PQA R IIPPL
Sbjct: 61  STLIGLSLCEAAYLSEIVRAGIAAVPKGQINAARAIGMTEAQVMRYIVAPQAFRIIIPPL 120

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +    +LK +S+A  +   +L+     +I +    +E+  +    YL+++    L   R
Sbjct: 121 GNSVNGVLKTTSIASIISMEELLRRTQVLIQEKFLVLELFTVAALYYLAMTTAWELIQRR 180

Query: 388 LNAK 391
           +  +
Sbjct: 181 IEKR 184


>gi|146340848|ref|YP_001205896.1| putative amino acid ABC transport, permease [Bradyrhizobium sp.
           ORS278]
 gi|146193654|emb|CAL77671.1| putative amino acid ABC transport, permease protein [Bradyrhizobium
           sp. ORS278]
          Length = 506

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 57/81 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ ++ A++AE++R GL A+PRGQ EAA ALGL+  K T  ++LPQA+R +IP + + 
Sbjct: 374 IGVALFSGAYMAEVIRGGLQAIPRGQAEAASALGLSWWKTTSFIVLPQALRHVIPGIVNS 433

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +++L K++SL   V   DL+ 
Sbjct: 434 FISLFKDTSLVSIVALFDLLG 454


>gi|317970285|ref|ZP_07971675.1| polar amino acid ABC transporter, inner membrane subunit
           [Synechococcus sp. CB0205]
          Length = 403

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 28/216 (12%)

Query: 167 FGMFLNNRGLSFPT----------LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
            GM L   GL  P           LT+   +   +  F LG++L+L      R       
Sbjct: 173 LGMTLIAGGLGLPVVSPSRWGGLLLTLIEASFAILLCFPLGVLLAL-----GRRSRLPLL 227

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + L +LYI    I G P + L      L   + +LG     GG +    + + ++ L+ +
Sbjct: 228 RWLSVLYIE--FIRGAPLITL------LFLGQNILGLL-LPGGFSPDRVWRAAWV-LTFF 277

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AE VRSGL+A+P GQMEAA ALGL   +A   V+LPQA+R  +P +  Q++NLL+
Sbjct: 278 AAAYVAEAVRSGLVALPPGQMEAARALGLPVHQAMLKVVLPQALRVALPAMVGQFINLLQ 337

Query: 337 NSSLAVAVGFADLVSVGGTIINQT---GQAIEIILI 369
           +++L   +G  +L+     ++      G+  E+ L+
Sbjct: 338 DTTLLSLIGLFELLGTARAVMANPAFLGKDAEVYLV 373


>gi|206974269|ref|ZP_03235186.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus H3081.97]
 gi|217957949|ref|YP_002336493.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus AH187]
 gi|229137212|ref|ZP_04265829.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST26]
 gi|206747509|gb|EDZ58899.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus H3081.97]
 gi|217064262|gb|ACJ78512.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus AH187]
 gi|228646207|gb|EEL02424.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST26]
          Length = 230

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|147921223|ref|YP_684965.1| ABC-type glutamate import system, permease component [uncultured
           methanogenic archaeon RC-I]
 gi|110620361|emb|CAJ35639.1| ABC-type glutamate import system, permease component [uncultured
           methanogenic archaeon RC-I]
          Length = 440

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 90/155 (58%), Gaps = 1/155 (0%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F  P L Q +  GGS     F +  +ALS  + A++AEI ++G+ A+ +GQMEAA +L
Sbjct: 270 VNFGLPFLIQ-DLTGGSFNIDGFTACIVALSMNSGAYMAEIFKAGIEAIHKGQMEAARSL 328

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++H +A   ++LPQA + ++P L ++++ L+K+SS+ + +  ++++    T+  +    
Sbjct: 329 GMSHYQAMTFIILPQAFKIVLPALGNEFIALIKDSSIGLVISVSEVLWWSKTVGAEHYNT 388

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L    +YL ++I +   +  +  K  +  +K
Sbjct: 389 FTPLLAAGLVYLCITIPLGRIVQYMEKKYNVNARK 423


>gi|83592632|ref|YP_426384.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575546|gb|ABC22097.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 218

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 65/111 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  M+   AL   + A+++EI R  L A+PRGQ EAA+ALG +     R +LLPQA R  
Sbjct: 84  PALMAAIGALGLASGAYVSEIYRGSLNAIPRGQGEAALALGFSGGSIWRRILLPQAFRLS 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +P L ++ + LLK SSL   +G A+L  V  T+   T +A+EI +    IY
Sbjct: 144 VPALVNELILLLKASSLISVIGVAELTRVSQTVSASTYRALEIYMAAGVIY 194



 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 31/52 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +L G  +T  ++  G++   +IG LV  GRLS N+L+  I  +YV  FR +P
Sbjct: 13  LLKGAGSTIAISLVGILLGQVIGALVCVGRLSGNRLIDAIGALYVSFFRGVP 64


>gi|33603521|ref|NP_891081.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33577645|emb|CAE34910.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 253

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  YT++ +AE VR+G+ + P GQ  AA ALG+   +  R VLLP + R I+P
Sbjct: 109 FIPAVLCLGFYTSSRVAEQVRAGIESRPAGQRMAATALGMRPSQVYRYVLLPTSFRIILP 168

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KN+S+A  +G  +LV    ++   + Q  E        Y  L++++   M
Sbjct: 169 PLTSELLNLIKNTSVAFTIGLLELVGAARSMQEFSFQVFEAFAGATLCYFLLNLIVLRAM 228

Query: 386 NRLNAKIAL 394
             +  ++A+
Sbjct: 229 RYIETRLAV 237



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T   A    I A  IG +VG  R + +K    +   YVE FRNIP LV 
Sbjct: 20  YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARIMGATYVEFFRNIPLLVQ 79

Query: 145 IFFLYKSVLSVLPI----PDHSIVLPFGMFL 171
           +F  Y  V  +LP+       SI  P+G+F+
Sbjct: 80  MFLWYFVVPEILPVQLGDAIKSIPPPWGIFI 110


>gi|17986396|ref|NP_539030.1| asparagine transport system permease protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|23502804|ref|NP_698931.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|62290806|ref|YP_222599.1| amino acid ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|82700716|ref|YP_415290.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|161619873|ref|YP_001593760.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|189025022|ref|YP_001935790.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225628153|ref|ZP_03786188.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225853391|ref|YP_002733624.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis ATCC 23457]
 gi|237816316|ref|ZP_04595309.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|254690094|ref|ZP_05153348.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 6 str. 870]
 gi|254694582|ref|ZP_05156410.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|254696207|ref|ZP_05158035.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254700594|ref|ZP_05162422.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella suis bv.
           5 str. 513]
 gi|254704964|ref|ZP_05166792.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella suis bv.
           3 str. 686]
 gi|254707523|ref|ZP_05169351.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           pinnipedialis M163/99/10]
 gi|254708941|ref|ZP_05170752.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           pinnipedialis B2/94]
 gi|254731125|ref|ZP_05189703.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 4 str. 292]
 gi|256030467|ref|ZP_05444081.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           pinnipedialis M292/94/1]
 gi|256045555|ref|ZP_05448438.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256158451|ref|ZP_05456349.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti
           M490/95/1]
 gi|256253871|ref|ZP_05459407.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti
           B1/94]
 gi|256258347|ref|ZP_05463883.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 9 str. C68]
 gi|256263128|ref|ZP_05465660.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260169375|ref|ZP_05756186.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella sp.
           F5/99]
 gi|260546068|ref|ZP_05821808.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260562865|ref|ZP_05833351.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260567563|ref|ZP_05838033.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|260755632|ref|ZP_05867980.1| ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260758857|ref|ZP_05871205.1| ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260760581|ref|ZP_05872924.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884657|ref|ZP_05896271.1| ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|261214906|ref|ZP_05929187.1| amino acid ABC transporter, permease [Brucella abortus bv. 3 str.
           Tulya]
 gi|261221007|ref|ZP_05935288.1| ABC transporter [Brucella ceti B1/94]
 gi|261315004|ref|ZP_05954201.1| ABC transporter [Brucella pinnipedialis M163/99/10]
 gi|261316439|ref|ZP_05955636.1| ABC transporter [Brucella pinnipedialis B2/94]
 gi|261751102|ref|ZP_05994811.1| ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261755664|ref|ZP_05999373.1| ABC transporter [Brucella suis bv. 3 str. 686]
 gi|261758896|ref|ZP_06002605.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|265987509|ref|ZP_06100066.1| ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|265991982|ref|ZP_06104539.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265996967|ref|ZP_06109524.1| ABC transporter [Brucella ceti M490/95/1]
 gi|297247190|ref|ZP_06930908.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|17981988|gb|AAL51294.1| asparagine transport system permease protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|23348827|gb|AAN30846.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|62196938|gb|AAX75238.1| amino acid ABC transporter, permease protein [Brucella abortus bv.
           1 str. 9-941]
 gi|82616817|emb|CAJ11912.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|161336684|gb|ABX62989.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|189020594|gb|ACD73316.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225616978|gb|EEH14025.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225641756|gb|ACO01670.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
 gi|237788383|gb|EEP62598.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260096175|gb|EEW80051.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260152881|gb|EEW87973.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260157081|gb|EEW92161.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|260669175|gb|EEX56115.1| ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260671013|gb|EEX57834.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675740|gb|EEX62561.1| ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260874185|gb|EEX81254.1| ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|260916513|gb|EEX83374.1| amino acid ABC transporter, permease [Brucella abortus bv. 3 str.
           Tulya]
 gi|260919591|gb|EEX86244.1| ABC transporter [Brucella ceti B1/94]
 gi|261295662|gb|EEX99158.1| ABC transporter [Brucella pinnipedialis B2/94]
 gi|261304030|gb|EEY07527.1| ABC transporter [Brucella pinnipedialis M163/99/10]
 gi|261738880|gb|EEY26876.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|261740855|gb|EEY28781.1| ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261745417|gb|EEY33343.1| ABC transporter [Brucella suis bv. 3 str. 686]
 gi|262551435|gb|EEZ07425.1| ABC transporter [Brucella ceti M490/95/1]
 gi|263003048|gb|EEZ15341.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093030|gb|EEZ17180.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|264659706|gb|EEZ29967.1| ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|297174359|gb|EFH33706.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|326409954|gb|ADZ67019.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326539670|gb|ADZ87885.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M5-90]
          Length = 240

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL +IS+  +     +  I + Y   +  P +G           PE +   IAL+ + ++
Sbjct: 50  PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S
Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +   +  A+L   G  I  +T    EI L    IY  ++ + A  M+R
Sbjct: 162 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209


>gi|322386833|ref|ZP_08060457.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269115|gb|EFX52051.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 542

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 69/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++
Sbjct: 404 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFV 463

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+  +   +  +  K
Sbjct: 464 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIEQK 522


>gi|271964435|ref|YP_003338631.1| amino acid ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270507610|gb|ACZ85888.1| amino acid ABC transporter, permease protein [Streptosporangium
           roseum DSM 43021]
          Length = 332

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 112/219 (51%), Gaps = 22/219 (10%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL------YISTF----LIFG 231
           T++  A    F F+LG VL+L   R+S         A PLL      YI+ F    LI  
Sbjct: 117 TLELTALGIGFGFLLGTVLALM--RMS---------ANPLLSSVAWGYIALFRSIPLILQ 165

Query: 232 LPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           L     +AL Y +L F  P    F  IG   +     +  + L+ + AA+ AEIVR+GL+
Sbjct: 166 LLFWYNLALLYPRLSFGVPFGPSFFDIGTMDLIGPVTAAALGLALHQAAYAAEIVRAGLL 225

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQ EAA ALG+   +    ++LPQAMRSI+P   ++ + L+K +S+   +   +L 
Sbjct: 226 SVDHGQREAAAALGIPRSRQLFRIVLPQAMRSIVPTAGNEIIGLVKGTSMVYIMALPELF 285

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                I N+ G+ I ++L+    YL ++ ++++  + L 
Sbjct: 286 YQVQVIYNRNGRVIALLLVATIWYLVMTTVLSVVQHYLE 324


>gi|256375587|ref|YP_003099247.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255919890|gb|ACU35401.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 215

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 56/83 (67%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    ++L+ YT+AFI E++RSG+  VP GQ EA+ ALGL+  +    V+LPQA+R+++P
Sbjct: 85  FKGAVVSLTVYTSAFICEVIRSGINTVPVGQAEASRALGLSFGQMLGNVVLPQALRTVVP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFAD 348
           PL S  + LLKN+++A      D
Sbjct: 145 PLASTMIALLKNTTIAAGFSVGD 167


>gi|182439547|ref|YP_001827266.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326780211|ref|ZP_08239476.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178468063|dbj|BAG22583.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326660544|gb|EGE45390.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 288

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 87/143 (60%), Gaps = 7/143 (4%)

Query: 255 NFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             +G STVS   P  +++ I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL   +  
Sbjct: 141 QILGVSTVSLLGPVTIAV-IGLTLHEAAYAAEVVRGGILSVERGQVEAAQSLGLGPWRRF 199

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQAMRSI+PP  +  +  LK +S+   +   DL+     + ++T Q I ++L+  
Sbjct: 200 RRIVLPQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYQVIPLLLVAT 259

Query: 372 FIYLSLSIMIAL---FMNRLNAK 391
             Y +++ ++++   ++ R  A+
Sbjct: 260 LWYAAVTTLLSIGQRYVERYYAR 282


>gi|149376722|ref|ZP_01894480.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
 gi|149358961|gb|EDM47427.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
          Length = 361

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 77/125 (61%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE++R GL A+PRGQ EAA ALGL + K   L++LPQA++ +IP + + 
Sbjct: 231 IGITLWQSAYMAEVIRGGLQAIPRGQYEAASALGLGYWKKMGLIILPQALKLVIPGIVNT 290

Query: 331 YLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNR 387
           +++L K+++L + +G  D++ +V  T+ +   Q  A+E  +   F +      I+ +   
Sbjct: 291 FISLFKDTTLVLIIGLFDILGTVQSTVTDPAWQNVAVEGYVFVAFCFWVFCFGISRYSQN 350

Query: 388 LNAKI 392
           L  K+
Sbjct: 351 LERKL 355



 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA+ G+I +  IGTL+  GR S   ++  +C V++EV+R +P + V+F    S
Sbjct: 153 GLMLTLILAYIGIIASLPIGTLLALGRRSEMPIIRGLCVVFIEVWRAVPLITVLFM--AS 210

Query: 152 VLSVLPIPD 160
           V+  L +P+
Sbjct: 211 VMLPLFLPE 219


>gi|33598572|ref|NP_886215.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33574701|emb|CAE39358.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis]
          Length = 228

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 1/162 (0%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGL 289
           GL  L LI + +  +F  P +G +    G  +    F S  I  + + AA+  EI+R+G+
Sbjct: 62  GLRALPLILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEAAYFCEIMRAGI 121

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++PRGQ  AA A+GL + +    V+LPQA+R++ P L +Q + L +++SL   +   D 
Sbjct: 122 QSIPRGQTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDTSLVYVLSLTDF 181

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  G  +  +  + +E+ L    +Y  +S   + F++ L  +
Sbjct: 182 LGAGINVAQRDNRLVEMYLFVAAVYFVMSFAASRFVHYLQQR 223


>gi|153011130|ref|YP_001372344.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563018|gb|ABS16515.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 226

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  S    A+ +EI+R+ + AVP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAAVIGFSLSVGAYSSEIIRAVISAVPKGQWEAAYSIGMSWRQALARTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL +S +++   
Sbjct: 149 PLSNSFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLVMSSVLSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLEKR 214


>gi|153009882|ref|YP_001371097.1| polar amino acid ABC transporter inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561770|gb|ABS15268.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 385

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T L++LPQA++ +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLIVLPQALKLVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 313 FIGLFKDTSLVYIIGMFDLLGI 334


>gi|186473670|ref|YP_001861012.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196002|gb|ACC73966.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 219

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 84/150 (56%), Gaps = 3/150 (2%)

Query: 250 VLGQFNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +L QF + G   V      F+S  +AL+  TAA+ +EI+R+GL++VP GQ EAA A+GL 
Sbjct: 69  ILLQFFYFGLPAVHITLSSFVSSTLALAWCTAAYTSEIIRAGLLSVPHGQREAAYAIGLK 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                +L++LPQ +R  +PPL    L +L+ +SL   V   +LV+    I   T   +++
Sbjct: 129 EVDTLKLIILPQGLRVSVPPLLGFALVMLQATSLCFTVALPELVTRANQIGTGTFLYMQV 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +   +Y ++ +   L ++ +  ++A  E
Sbjct: 189 LTLTALLYAAICLPSTLLVSSIERRLARHE 218


>gi|55378504|ref|YP_136354.1| glutamine ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
 gi|55231229|gb|AAV46648.1| glutamine ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
          Length = 226

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 2/125 (1%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F G S  S  F++  IAL   +AA+ ++I R  L +V  GQ+EAA A+G+   +A R V+
Sbjct: 80  FFGLSVSSSAFVTATIALGLRSAAYQSQIFRGALQSVDEGQLEAARAVGMGRLQAIRSVV 139

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFI 373
           +PQA+R  +P   +++  +LK++S+A+ +G  +L+++G  +    Q+  A+EI L    I
Sbjct: 140 VPQALRRSVPGFQNEFTIVLKDTSIAIVIGLGELLTIGQNLYQGGQSTAALEIFLTVSLI 199

Query: 374 YLSLS 378
           Y  L+
Sbjct: 200 YFVLT 204


>gi|116251958|ref|YP_767796.1| general L-amino acid transport system permease protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|3182889|sp|Q52814|AAPM_RHIL3 RecName: Full=General L-amino acid transport system permease
           protein AapM
 gi|1154896|emb|CAA57935.1| general amino acid ABC type transporter [Rhizobium leguminosarum]
 gi|115256606|emb|CAK07694.1| General L-amino acid transport system permease protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 384

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S +T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + + 
Sbjct: 252 IGVSIFTSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIVNT 311

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++   K++SL   +G  DL+ +
Sbjct: 312 FIGTFKDTSLVTIIGMFDLLGI 333


>gi|282917762|ref|ZP_06325512.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|283767496|ref|ZP_06340411.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus H19]
 gi|282318047|gb|EFB48407.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|283461375|gb|EFC08459.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus H19]
          Length = 239

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 96/155 (61%), Gaps = 10/155 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F LG++++LF T L R    K  +++  +Y+S  +I G P +V +   + + +  
Sbjct: 34  ITLVTFALGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQL---FIIFYGI 87

Query: 249 PVLGQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P LG+    +     T++P   ++ I LS    A+ +EI+R G+I++P+GQ EAA ++G+
Sbjct: 88  PELGRLLTNDADNQWTLAPVVAAI-IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGM 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           T+ +  + ++LPQA+R  IP L + +L+L+K++SL
Sbjct: 147 TYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSL 181


>gi|190893857|ref|YP_001980399.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190699136|gb|ACE93221.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 219

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 20/206 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247
           + SF  G++L L  T ++R F    G A P++ ++ F ++   G P LV +   + + + 
Sbjct: 21  LLSFTFGLILGLI-TAIARLF----GPA-PVVVVARFYVWVIRGTPLLVQL---FVIFYG 71

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ 
Sbjct: 72  LPSIG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSW 123

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T + + + 
Sbjct: 124 RQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILY 183

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    IYL+LS +++    RL  + A
Sbjct: 184 IEAALIYLALSSILSQLQVRLERRFA 209


>gi|241204486|ref|YP_002975582.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858376|gb|ACS56043.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 384

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S +T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + + 
Sbjct: 252 IGVSIFTSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIVNT 311

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++   K++SL   +G  DL+ +
Sbjct: 312 FIGTFKDTSLVTIIGMFDLLGI 333


>gi|89068767|ref|ZP_01156153.1| putative amino acid uptake ABC transporter permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89045730|gb|EAR51792.1| putative amino acid uptake ABC transporter permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 537

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 9/134 (6%)

Query: 220 PLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSC 275
           PL   S FLI    G+P LV+I     L+   P+ G   +  GG    P  +   IA++ 
Sbjct: 361 PLSVASEFLIDTLRGIPMLVII-----LYIGLPLAGVVKSSTGGFIDPPNMLRGIIAMAI 415

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +A++AEI R+G+ AVP GQ+EAA +LGL+     R V+LPQA R +IPP+ ++++ +L
Sbjct: 416 AYSAYLAEIFRAGINAVPTGQIEAARSLGLSRWSTARHVILPQAFRIVIPPMGNEFIAIL 475

Query: 336 KNSSLAVAVGFADL 349
           K++SL   +   DL
Sbjct: 476 KDTSLLSILSIRDL 489


>gi|315502594|ref|YP_004081481.1| polar amino acid abc transporter, inner membrane subunit
           [Micromonospora sp. L5]
 gi|315409213|gb|ADU07330.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora sp. L5]
          Length = 291

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 61/92 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +L I L+ Y  + +AEI R+G+ AVP GQ E A A+G+   +  RL+LLPQA RS++
Sbjct: 136 KFWALVIGLTLYNGSVLAEIFRAGINAVPYGQSEGAYAIGMRKNQVLRLILLPQAFRSML 195

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           P + SQ + LLK+++L   + + +L+ VG  I
Sbjct: 196 PAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227


>gi|21224120|ref|NP_629899.1| glutamate permease [Streptomyces coelicolor A3(2)]
 gi|2687339|emb|CAA15880.1| glutamate permease [Streptomyces coelicolor A3(2)]
          Length = 299

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 23/221 (10%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   V +  LG VL +   RLS H   +    +P+  +  F    +P LVL+   
Sbjct: 71  TLKAAALSMVIALPLGAVLGI--ARLSDHAWVR----IPVAIVVEFF-RSIPVLVLM--- 120

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298
                   + G   F   + VS +   LY     L  Y A+ +AEIVR+G++A+P+GQ E
Sbjct: 121 --------IFGLALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAE 172

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTII 357
            A+A+GL   ++ RL+LLPQA+ +++P + SQ + +LK+++L  AV  F +L++   T+ 
Sbjct: 173 GAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASANTMS 232

Query: 358 NQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G   I    +   IY++L+  +  F + L  ++   +K
Sbjct: 233 GYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRAKK 273



 Score = 44.3 bits (103), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E+   E  +  + +TSD  ++T I  G  NT   A   M+ A  +G ++G  RLS + 
Sbjct: 39  LDEKGQLEWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 98

Query: 124 LVAWICRVYVEVFRNIPPLVVIFF 147
            V     + VE FR+IP LV++ F
Sbjct: 99  WVRIPVAIVVEFFRSIPVLVLMIF 122


>gi|325963973|ref|YP_004241879.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470060|gb|ADX73745.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 254

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 84/134 (62%), Gaps = 7/134 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+I EI RSG+ +V +GQ+EA+ ALG ++  + RLV++PQ +R ++P L +Q
Sbjct: 107 LALTLIAAAYIGEIFRSGIQSVEKGQLEASRALGFSYGSSMRLVVVPQGIRRVLPALVNQ 166

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +++LLK+SSL   +G A    ++  +G   +  TG    ++   + +YL L++ +  F+N
Sbjct: 167 FISLLKDSSLVFMLGLAASDREIFRIGNDAMANTGNLSPLVAAGV-LYLILTVPLTHFVN 225

Query: 387 RLNAKI--ALKEKK 398
            ++ ++     EKK
Sbjct: 226 FIDHRLRTGKPEKK 239



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++VG  NT  LA +  I  +++G  +    +S N    W+ R+Y ++FR +P ++VI  +
Sbjct: 25  LMVGLPNTLILAVASGILGSVLGLALAMMGISRNAGARWVARIYTDIFRGLPAILVILVI 84


>gi|315124397|ref|YP_004066401.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315018119|gb|ADT66212.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 247

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|255323270|ref|ZP_05364405.1| L-cystine transport system permease protein TcyB [Campylobacter
           showae RM3277]
 gi|255299793|gb|EET79075.1| L-cystine transport system permease protein TcyB [Campylobacter
           showae RM3277]
          Length = 224

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 111/206 (53%), Gaps = 21/206 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+++++  T ++R  + K  K L   YI  F   G P LV +   + ++F  P++G
Sbjct: 35  SFSLGLLIAIL-TAIARIANIKILKQLSEFYIWIFR--GTPLLVQL---FIVYFGLPIVG 88

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               +  + +        I  S    A+ +E VR+ +++VP+GQ EAA ALG+++ +  R
Sbjct: 89  VTLDVWSAAI--------ITFSLNIGAYASEAVRAAVLSVPKGQWEAATALGMSYTQILR 140

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ PQA R  +PPL++ +++ LK++SLA ++   D+  V   I  +T   + + ++   
Sbjct: 141 RIIAPQAARISLPPLSNIFISTLKDTSLAASITMVDMFMVAQRIAARTFDPLTLYVLAAL 200

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
            YL    ++  F+  L AK+   EK+
Sbjct: 201 FYL----IVCTFLTFLQAKL---EKR 219


>gi|257060311|ref|YP_003138199.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 8802]
 gi|256590477|gb|ACV01364.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 8802]
          Length = 401

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 27/204 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIA 239
           LT+ T     V SF  GI+L+L      R       + L + YI   +I GLP + +L  
Sbjct: 201 LTLLTAIVSIVLSFPFGILLAL-----GRQSSLNVIRWLSIAYIE--VIRGLPLIGILFM 253

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQME 298
            +  L    PV        GS   PE +   IA  + ++AA++AE VR GL +VP+GQ+E
Sbjct: 254 AQIMLPLILPV--------GS--RPERVIRAIAGFTLFSAAYLAENVRGGLQSVPKGQIE 303

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL        ++LPQA++++IP +  Q+++L K++SL   VG  DL+ +  +I+ 
Sbjct: 304 AAKALGLNPIFVLIFIVLPQALKAVIPSIVGQFISLFKDTSLLAIVGLVDLLGISQSILA 363

Query: 359 Q---TGQAIEI-----ILIWMFIY 374
                G+  E+     ++ W+F Y
Sbjct: 364 NPKFIGRYGEVYLFIAVIYWIFCY 387


>gi|295691960|ref|YP_003600570.1| amino acid ABC transporter, permease component [Lactobacillus
           crispatus ST1]
 gi|295030066|emb|CBL49545.1| Amino acid ABC transporter, permease component [Lactobacillus
           crispatus ST1]
          Length = 537

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 73/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++
Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNE 450

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N
Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506


>gi|307729013|ref|YP_003906237.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583548|gb|ADN56946.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 225

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 76/134 (56%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           STV    +S   A S   AAF  EI+R+G+ ++PRGQ++A  ALG+T R+  R V+LPQA
Sbjct: 91  STVDLRLVSALTAYSLVEAAFFCEIIRAGIASLPRGQLQAGYALGMTSRQTMRYVILPQA 150

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R+++P   +Q + + +++SL   +   D       I  + G  + ++L+   +Y +++ 
Sbjct: 151 FRAMVPLALTQCIVIFQDTSLVYVIALGDFFRRVTAIGERDGTIVPMLLVAGAVYWAITS 210

Query: 380 MIALFMNRLNAKIA 393
           ++    N +  ++A
Sbjct: 211 VLIAVTNGVRTRLA 224


>gi|163792483|ref|ZP_02186460.1| hypothetical protein BAL199_16588 [alpha proteobacterium BAL199]
 gi|159182188|gb|EDP66697.1| hypothetical protein BAL199_16588 [alpha proteobacterium BAL199]
          Length = 254

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 91/167 (54%), Gaps = 10/167 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVR 286
           G P LV I L Y         GQF+FI  S + P     Y    IAL+  T A+ +EI+R
Sbjct: 73  GTPLLVQIFLIYY------GTGQFDFIKESFLWPVLREAYWCAIIALTLNTGAYTSEIIR 126

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ +VP GQ+EAA A G+      R V+ PQA+R  +P   ++ + ++K++SLA  V  
Sbjct: 127 GGIESVPWGQVEAAKACGMNVWLRFRRVVFPQAIRQALPGYGNEIILMVKSTSLASTVTL 186

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++  +   I++QT   +E+ ++   IYL++  +I   ++ L  +++
Sbjct: 187 LEITGIARKIVSQTYAPLELFIMAGAIYLTIVFVITRAVDMLENRLS 233


>gi|153951169|ref|YP_001398026.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938615|gb|ABS43356.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. doylei 269.97]
          Length = 247

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|313888661|ref|ZP_07822326.1| ABC transporter, permease protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845390|gb|EFR32786.1| ABC transporter, permease protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 256

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 76/125 (60%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I +S  T A++AEI+R G+I+V RGQ E A+++G+TH +    V+LPQA+R+IIP +
Sbjct: 108 SALIIVSVNTGAYMAEIIRGGIISVDRGQTEGALSIGMTHWQTMTEVVLPQAVRNIIPSV 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++++  +K+SS+   +  ++L  +  +      +  E+  I   IYL L+I ++  M  
Sbjct: 168 GNEFIVNIKDSSVLNVISVSELFFISKSAAGTYLRYFEVFFITALIYLFLTISVSQAMKL 227

Query: 388 LNAKI 392
           +  K+
Sbjct: 228 VEKKL 232


>gi|294670526|ref|ZP_06735406.1| hypothetical protein NEIELOOT_02248 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307805|gb|EFE49048.1| hypothetical protein NEIELOOT_02248 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 248

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 78/121 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+    A+I EI R+G++++ +GQMEAA +LGLT+ +A R V+LPQA R ++PPL ++
Sbjct: 122 LALTANATAYITEIFRAGILSIDKGQMEAARSLGLTYPQAMRFVILPQAFRRMLPPLANE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK+SSL  ++  A+L  V  TI  +     E +     IYL ++I ++ F + L  
Sbjct: 182 FITLLKDSSLLSSIAVAELTYVQRTISGRFSIYEEPLYAIALIYLLMTICLSWFFSSLEK 241

Query: 391 K 391
           +
Sbjct: 242 R 242


>gi|269796734|ref|YP_003316189.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
 gi|269098919|gb|ACZ23355.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
          Length = 374

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 115/220 (52%), Gaps = 27/220 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALKYQLHF 246
           V  F LG VL+L   RLSR          PLL    +  T++   +P ++ + L Y L +
Sbjct: 106 VIGFGLGTVLALM--RLSRS---------PLLRAVSWAYTWVFRSVPLILQLLLWYNLAY 154

Query: 247 DKPVLG-------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             P L         F   G   V  +F +  + L    AA+ AEIVR+G+++V +GQ EA
Sbjct: 155 LYPTLSLGIPFGPSFAEFGTLDVINKFGAAILGLGLSQAAYSAEIVRAGILSVDQGQHEA 214

Query: 300 AIALGLTH-RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A ALG+   R++TR+VL PQAMR+I+P   ++ + L+K +S+   + + +L    G I  
Sbjct: 215 AAALGIPRARQSTRIVL-PQAMRTIVPTSVNEIIGLVKGTSVVYVLAYGELFYTVGVIYG 273

Query: 359 QTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALK 395
           +  + + +++   IW  I  ++  +I  ++ R  AK A++
Sbjct: 274 RNQRVVPLLMVAAIWYVIITTVITVIQFYVERHYAKGAVR 313


>gi|226228607|ref|YP_002762713.1| putative amino acid ABC transporter permease/substrate binding
           protein [Gemmatimonas aurantiaca T-27]
 gi|226091798|dbj|BAH40243.1| putative amino acid ABC transporter permease/substrate binding
           protein [Gemmatimonas aurantiaca T-27]
          Length = 519

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 5/173 (2%)

Query: 224 ISTFLIFGLPTL-VLIALKYQLHFDKPVLGQ----FNFIGGSTVSPEFMSLYIALSCYTA 278
           I+T  ++G P L   +++  ++    PVL Q    +  + G    P  ++  + L    A
Sbjct: 344 IATGRVYGGPVLRAALSIYVEVVRGTPVLLQLFVLYYGLSGVIRLPALVAAILGLGLNYA 403

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI RS L+A+PR Q+EAA  LGLT  +  RLV  PQA+R  + P+T+ ++ LLK+S
Sbjct: 404 AYESEIYRSALMAIPRAQLEAARTLGLTEWQVLRLVRGPQALRLALAPMTNDFVALLKDS 463

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SL   +   +L          +G  +   L+   IYL +S+ ++    RL A+
Sbjct: 464 SLVSVITVVELTKQTAIYATNSGSWVVPGLMCGVIYLCMSLPLSRLARRLEAR 516


>gi|261406265|ref|YP_003242506.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261282728|gb|ACX64699.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 480

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F F+LG++++L      R    K  K L   YI   +I G P LV +   + +H+    L
Sbjct: 292 FGFILGLIVALM-----RMSGVKILKFLATAYIE--IIRGTPMLVQL---FIIHYS---L 338

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F+       SP   S  + LS  +AA++AEI R+G+  V RGQ+EAA +LG+T  KA 
Sbjct: 339 AAFDI----KFSP-IQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTKGKAM 393

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA++ ++P + ++++ ++K SS+   +G  D++     +   T   +  +L+  
Sbjct: 394 RHIILPQALKGVLPAIGNEFVVIIKESSIVSFIGVFDIMYQAQILRGSTFAPLNPLLVAA 453

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  L+ +++  +     K++  + +
Sbjct: 454 MIYFILTFVLSKLLGVWERKLSASDNR 480


>gi|33592312|ref|NP_879956.1| amino acids ABC transporter, permease protein [Bordetella pertussis
           Tohama I]
 gi|33596425|ref|NP_884068.1| amino acids ABC transporter, permease protein [Bordetella
           parapertussis 12822]
 gi|33602284|ref|NP_889844.1| amino acids ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
 gi|33566194|emb|CAE37100.1| amino acids ABC transporter, permease protein [Bordetella
           parapertussis]
 gi|33571957|emb|CAE41478.1| amino acids ABC transporter, permease protein [Bordetella pertussis
           Tohama I]
 gi|33576723|emb|CAE33801.1| amino acids ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
          Length = 229

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 90/157 (57%), Gaps = 15/157 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P L      GGS     F +L  AL  Y +A+++E++RSG+ 
Sbjct: 70  GMPLLMLIFWAY---FAVPKL-----TGGSISG--FWTLVTALVIYESAYLSEVIRSGIE 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ+EA+ +LG+ +    R V+LPQA+ +++P +TSQ+++ +K +SL   +   +L 
Sbjct: 120 AIPKGQIEASRSLGVGYWTTMRKVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELT 179

Query: 351 ----SVGGTIINQTGQAIEII-LIWMFIYLSLSIMIA 382
                V   ++ Q  Q   I+ +I+  +  SLS  +A
Sbjct: 180 FAANQVNNLVLTQPLQVFGILAIIYFLVCFSLSRSVA 216


>gi|297624654|ref|YP_003706088.1| polar amino acid ABC transporter inner membrane subunit [Truepera
           radiovictrix DSM 17093]
 gi|297165834|gb|ADI15545.1| polar amino acid ABC transporter, inner membrane subunit [Truepera
           radiovictrix DSM 17093]
          Length = 417

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/132 (36%), Positives = 82/132 (62%), Gaps = 8/132 (6%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAF 280
           LY+   +I G+P LV+I     L+   P+     +  GG    P  M   +A++   AA+
Sbjct: 249 LYVD--MIRGIPMLVII-----LYVGFPLQAALRDATGGLLNMPILMRGGVAIALGYAAY 301

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI R+G+ A+P+GQ+EAA +LGL+  ++ R V+LPQA+R + PPL ++++ +LK++SL
Sbjct: 302 MAEIFRAGIEAIPKGQLEAARSLGLSSWQSARFVVLPQALRIVTPPLGNEFIAMLKDTSL 361

Query: 341 AVAVGFADLVSV 352
              +G  +L  +
Sbjct: 362 LSILGVRELTQL 373


>gi|256784801|ref|ZP_05523232.1| glutamate permease [Streptomyces lividans TK24]
          Length = 295

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 23/221 (10%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   V +  LG VL +   RLS H   +    +P+  +  F    +P LVL+   
Sbjct: 71  TLKAAALSMVIALPLGAVLGI--ARLSDHAWVR----IPVAIVVEFF-RSIPVLVLM--- 120

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298
                   + G   F   + VS +   LY     L  Y A+ +AEIVR+G++A+P+GQ E
Sbjct: 121 --------IFGLALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAE 172

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTII 357
            A+A+GL   ++ RL+LLPQA+ +++P + SQ + +LK+++L  AV  F +L++   T+ 
Sbjct: 173 GAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASANTMS 232

Query: 358 NQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G   I    +   IY++L+  +  F + L  ++   +K
Sbjct: 233 GYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRAKK 273



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E+   +  +  + +TSD  ++T I  G  NT   A   M+ A  +G ++G  RLS + 
Sbjct: 39  LDEKGQLDWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 98

Query: 124 LVAWICRVYVEVFRNIPPLVVIFF 147
            V     + VE FR+IP LV++ F
Sbjct: 99  WVRIPVAIVVEFFRSIPVLVLMIF 122


>gi|229086725|ref|ZP_04218892.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-44]
 gi|228696599|gb|EEL49417.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-44]
          Length = 219

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 75/118 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++EI+R+G+ AV +GQ EAA+ALG+ + K  + ++LPQA+++I
Sbjct: 87  PAFLAAVLAFSLNSGAYMSEIIRAGIQAVDKGQTEAAMALGVPYGKMMKNIILPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    +Y  L I++
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLVYYILVIIL 204


>gi|161520629|ref|YP_001584056.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189353185|ref|YP_001948812.1| ABC-type polar amino acid transport system ATPase component
           [Burkholderia multivorans ATCC 17616]
 gi|160344679|gb|ABX17764.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189337207|dbj|BAG46276.1| ABC-type polar amino acid transport system ATPase component
           [Burkholderia multivorans ATCC 17616]
          Length = 500

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 95/181 (52%), Gaps = 12/181 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG++L  F   L+R  H+   K    +YI  F    LP LVL+   Y L    P +    
Sbjct: 34  LGVLLG-FPVALARQSHQPALKRAAAVYIWFFR--SLPLLVLLVFIYNL----PQV---- 82

Query: 256 FIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           F   STV S  F +  IA+     A+ AEI R G+++VPRGQ+EA  ALG+      R++
Sbjct: 83  FPATSTVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMI 142

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQ +R  +P L ++++ ++K +SL   +  A+++ VG  +  Q     E +L   F Y
Sbjct: 143 VMPQVIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYY 202

Query: 375 L 375
           +
Sbjct: 203 V 203


>gi|307547047|ref|YP_003899526.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307219071|emb|CBV44341.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 223

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 69/107 (64%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  + A+I+EIVR G+ ++ RGQ EA ++LGL+  +  R ++ PQA R +IPPL +Q 
Sbjct: 99  AIAVNSGAYISEIVRGGVQSIERGQKEAGLSLGLSRVQTFRYIIWPQAFRRMIPPLGNQG 158

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +  +K++SL   +G  +LV  G   I  T  A+E+ L+   +YL+++
Sbjct: 159 IISIKDTSLFSVIGVGELVRQGQIYIATTFTALEVYLMVAMLYLAIT 205


>gi|282899901|ref|ZP_06307862.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195171|gb|EFA70107.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii
           CS-505]
          Length = 340

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 8/111 (7%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  ++AA++AE VR GL ++P+GQ EAA ALGL       LV+LPQA+R++IP +  Q+
Sbjct: 219 GLVLFSAAYMAENVRGGLQSIPKGQFEAARALGLNTFLLLILVVLPQALRAVIPTIVGQF 278

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILI-----WMFIY 374
           + L K++SL   VG  +L  +  +I+ Q    G+ +E+ +      W+F Y
Sbjct: 279 IGLFKDTSLLSLVGLVELTGIARSILAQPQFLGRYMEVYIFIGAVYWLFCY 329


>gi|253681835|ref|ZP_04862632.1| amino acid ABC transporter, permease component [Clostridium
           botulinum D str. 1873]
 gi|253561547|gb|EES90999.1| amino acid ABC transporter, permease component [Clostridium
           botulinum D str. 1873]
          Length = 215

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 85/136 (62%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++SP   ++ I LS  + A+++EI+R G+I++ +GQ EA  +LG T+ +    V+LPQ
Sbjct: 80  GISLSPMAAAI-IGLSLNSGAYMSEIIRGGIISIDKGQFEACKSLGFTNLQTMTKVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R I+P + ++++ +LK++SL  A+   +L+      ++ +G+ +E  +I   +YL ++
Sbjct: 139 AFRIILPSVGNEFITMLKDTSLVSAITMEELMRNAELQMSASGRPVEPFVIAAVLYLLMT 198

Query: 379 IMIALFMNRLNAKIAL 394
            + A+  + L  K+++
Sbjct: 199 TVFAVIFSSLEKKMSM 214


>gi|120403416|ref|YP_953245.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956234|gb|ABM13239.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 226

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 75/126 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YTA+F+ E VRSG+  VP GQ EAA +LG T  +  R+VLLPQA R+++ PL S 
Sbjct: 101 LGLTVYTASFVCETVRSGVNTVPLGQAEAARSLGFTFGQNLRIVLLPQAFRAVLIPLGSV 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KN+++A A+G A+   +   +I  T   + +  I+   ++ L++ + L    L  
Sbjct: 161 LIALTKNTTIASAIGVAEAALLMKEMIENTAAVLVVGGIFALGFVILTLPLGLLFGWLGK 220

Query: 391 KIALKE 396
           ++A+  
Sbjct: 221 RMAVAH 226



 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y   IL  F  T  L     I A ++GT++ A RL+   ++ WI   YV + RN P  
Sbjct: 5   TEYRAEILAAFWTTIQLTVLAAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNIVRNTPLT 64

Query: 143 VVIFF 147
           ++I F
Sbjct: 65  LIILF 69


>gi|86150250|ref|ZP_01068477.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839366|gb|EAQ56628.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 247

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|228925611|ref|ZP_04088700.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|301052080|ref|YP_003790291.1| amino acid ABC transporter permease [Bacillus anthracis CI]
 gi|228834089|gb|EEM79637.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|300374249|gb|ADK03153.1| amino acid ABC transporter, permease [Bacillus cereus biovar
           anthracis str. CI]
          Length = 230

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + ++ RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSIDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|261340316|ref|ZP_05968174.1| L-cystine ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317407|gb|EFC56345.1| L-cystine ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 222

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG VL+L      R  H    + L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLVLGFVLALM-----RMSHVLPIRWLARFYISVFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERD 220



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    + W+ R Y+ VFR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSHVLPIRWLARFYISVFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107


>gi|222082275|ref|YP_002541640.1| octopine ABC transporter [Agrobacterium radiobacter K84]
 gi|221726954|gb|ACM30043.1| octopine ABC transporter [Agrobacterium radiobacter K84]
          Length = 242

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 10/167 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIA 282
           F+  G P LV I L Y        LGQF  +  S + P     Y    +AL+  TAA+ +
Sbjct: 59  FVFRGTPLLVQIFLIYY------GLGQFPAVRHSILWPILRQPYWCAVLALTLNTAAYAS 112

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R GL++VP GQ+EAA A G+      R ++ P A+R  +P   ++ ++++K +SLA 
Sbjct: 113 EIIRGGLLSVPHGQIEAARACGMGRFMQFRRIIWPLAIRQALPGYGNEMISMVKATSLAS 172

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +   ++  V   +I++T +AIE+ ++   IYL+++ ++   +  L 
Sbjct: 173 IITLMEVTGVAAKLISETYRAIEVFIVAGAIYLAINFLLTRLIQLLE 219


>gi|222094148|ref|YP_002528205.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1]
 gi|221238203|gb|ACM10913.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1]
          Length = 269

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 128 IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 187

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 188 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 247

Query: 391 KIALKE 396
           ++  KE
Sbjct: 248 RLQRKE 253


>gi|149183272|ref|ZP_01861715.1| amino acid ABC transporter (permease) [Bacillus sp. SG-1]
 gi|148849032|gb|EDL63239.1| amino acid ABC transporter (permease) [Bacillus sp. SG-1]
          Length = 221

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 108/200 (54%), Gaps = 11/200 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF  G++L++  T L+R    K  + +  +Y+S   I G P LV +   + + F    LG
Sbjct: 27  SFACGMILAI-TTALARLSGSKILRGIARVYVSA--IRGTPLLVQL---FIIFFGLGNLG 80

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               I      P F S  IA S    A+ +EIVR+ + ++P+GQ EA  ++G+T+ +  +
Sbjct: 81  ----IEALKFDP-FPSAVIAFSLNVGAYASEIVRAAIQSIPKGQWEAGYSIGMTYGQNLK 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA R  +PPL++ +++L+K++SLA  +   +L      I   T + + + +   F
Sbjct: 136 RVILPQAARVSVPPLSNSFISLVKDTSLASLILVTELFRKAQEIAATTYEFLLLYIEAAF 195

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           +Y  +  ++ L  +RL +++
Sbjct: 196 LYWVMCFILTLIQDRLESRL 215


>gi|118586386|ref|ZP_01543835.1| glutamine ABC transporter, integral membrane protein [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433173|gb|EAV39890.1| glutamine ABC transporter, integral membrane protein [Oenococcus
           oeni ATCC BAA-1163]
          Length = 214

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 14/179 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT   +   YI  F    +P L+++   Y       V+ +   IGG T         I L
Sbjct: 46  KTANVIARAYIEVFR--NIPLLIIVMFFYL------VVTKIVKIGGFTAGT------IGL 91

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + YT+AFIAE VR+G+ +V  GQ E A A GL+  +  R+++LPQA +  IP L +Q++N
Sbjct: 92  TLYTSAFIAETVRAGINSVGIGQTEGARANGLSFWQTLRIIILPQAFKIAIPSLGNQFIN 151

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+KNSS+   V   DL+     +   T  +    +I    YL +++ +  +M  L  K+
Sbjct: 152 LVKNSSILAFVAGGDLMYTANNVAATTFDSFNSYIIVGIFYLIITLPLNYYMKFLETKL 210



 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           LV F  T   +   +I +T++GTL    ++   K    I R Y+EVFRNIP L+++ F Y
Sbjct: 13  LVAFGYTLLSSIIALIASTVLGTLFAILQIVPIKTANVIARAYIEVFRNIPLLIIVMFFY 72

Query: 150 KSVLSVLPI 158
             V  ++ I
Sbjct: 73  LVVTKIVKI 81


>gi|15601789|ref|NP_233420.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|227812602|ref|YP_002812612.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505829|ref|ZP_04395338.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229510316|ref|ZP_04399796.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229517552|ref|ZP_04406997.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229605362|ref|YP_002876066.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|298499805|ref|ZP_07009611.1| amino acid ABC transporter, permease [Vibrio cholerae MAK 757]
 gi|9658481|gb|AAF96932.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|227011744|gb|ACP07955.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227015682|gb|ACP11891.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229345588|gb|EEO10561.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229352761|gb|EEO17701.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229356180|gb|EEO21098.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229371848|gb|ACQ62270.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|297541786|gb|EFH77837.1| amino acid ABC transporter, permease [Vibrio cholerae MAK 757]
          Length = 266

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|89073558|ref|ZP_01160080.1| ABC-type arginine transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89050585|gb|EAR56071.1| ABC-type arginine transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 219

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 80/135 (59%), Gaps = 1/135 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  IALS   A++ A+ +R  + AVP+GQ EAA ALG++  +    +++PQA+R
Sbjct: 72  ISP-FLSGVIALSLIFASYAAQTIRGAIKAVPKGQREAASALGISKSRTFVAIIIPQAIR 130

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T ++         +YL ++++ 
Sbjct: 131 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLSSAATHESFTWYATAAAVYLVITLIT 190

Query: 382 ALFMNRLNAKIALKE 396
              + R++AK + +E
Sbjct: 191 QQIIKRIDAKYSAQE 205


>gi|325507519|gb|ADZ19155.1| Glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum EA 2018]
          Length = 489

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 23/158 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL  + F+ FG+P L                       G  ++P    + IA+S  
Sbjct: 335 RGTPLLVQAFFIFFGIPGL----------------------SGLKINPVVAGI-IAVSLN 371

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++EI R G++++ +GQMEAA +LG+ +R A   ++ PQA++ +IP + +Q++  LK
Sbjct: 372 AGAYMSEIFRGGILSINQGQMEAARSLGIPYRTAMLKIVFPQAVKVMIPSIVNQFIISLK 431

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++S+   +G  +L + G  II  T +A +I LI   +Y
Sbjct: 432 DTSILSVIGIQELTNTGQIIIGATFKAFQIWLIVAIMY 469


>gi|238920485|ref|YP_002934000.1| glutamine ABC transporter permease protein [Edwardsiella ictaluri
           93-146]
 gi|238870054|gb|ACR69765.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 218

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 99/187 (52%), Gaps = 12/187 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R F       + L++I   LI G P +V +   Y   F  P++          + P F 
Sbjct: 43  ARAFGGWLSNHIALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLR------IDP-FS 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V++P A+R ++PPL
Sbjct: 91  AAIITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRHVIMPLALRRMLPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + R
Sbjct: 151 GNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLRR 210

Query: 388 LNAKIAL 394
           L  ++ +
Sbjct: 211 LERRLKI 217


>gi|297579919|ref|ZP_06941846.1| amino acid ABC transporter, permease [Vibrio cholerae RC385]
 gi|297535565|gb|EFH74399.1| amino acid ABC transporter, permease [Vibrio cholerae RC385]
          Length = 266

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|86152052|ref|ZP_01070264.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|121612320|ref|YP_001000576.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157415158|ref|YP_001482414.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005508|ref|ZP_02271266.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85840837|gb|EAQ58087.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|87249317|gb|EAQ72277.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157386122|gb|ABV52437.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747801|gb|ADN91071.1| Putative amino-acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315932617|gb|EFV11548.1| Amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 247

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|121587165|ref|ZP_01676940.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121726614|ref|ZP_01679850.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147672412|ref|YP_001215044.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153817648|ref|ZP_01970315.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153821766|ref|ZP_01974433.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|254850197|ref|ZP_05239547.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255746231|ref|ZP_05420178.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262158721|ref|ZP_06029835.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262168871|ref|ZP_06036565.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|121548604|gb|EAX58656.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121630920|gb|EAX63300.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|126511804|gb|EAZ74398.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126520762|gb|EAZ77985.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|146314795|gb|ABQ19335.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|254845902|gb|EET24316.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255735985|gb|EET91383.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262022570|gb|EEY41277.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|262029601|gb|EEY48251.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
          Length = 265

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 89  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|256059928|ref|ZP_05450113.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella neotomae
           5K33]
 gi|261323898|ref|ZP_05963095.1| ABC transporter [Brucella neotomae 5K33]
 gi|261299878|gb|EEY03375.1| ABC transporter [Brucella neotomae 5K33]
          Length = 241

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL +IS+  +     +  I + Y   +  P +G           PE +   IAL+ + ++
Sbjct: 51  PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 102

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S
Sbjct: 103 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 162

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +   +  A+L   G  I  +T    EI L    IY  ++ + A  M+R
Sbjct: 163 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 210


>gi|15902453|ref|NP_358003.1| ABC transporter substrate binding protein - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|15457972|gb|AAK99213.1| ABC transporter substrate binding protein - glutamine transport
           [Streptococcus pneumoniae R6]
          Length = 311

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 174 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 233

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 234 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 282


>gi|329938379|ref|ZP_08287804.1| putative ABC transporter permease protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302352|gb|EGG46243.1| putative ABC transporter permease protein [Streptomyces
           griseoaurantiacus M045]
          Length = 341

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 104/201 (51%), Gaps = 14/201 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + V  F+LG VL++   RLS +   +T     L +   ++    P LV +   + +    
Sbjct: 96  VMVLGFLLGTVLAVM--RLSANPVLRT-----LSWGYVWIFRSTPLLVQLLFWFNIGALY 148

Query: 249 PVLG-------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           P LG       QF  +    +    ++  I L+ +  A+ AE+VR G+++V  GQ EAA 
Sbjct: 149 PTLGLGVPFGPQFVTVKTVNLLGPTLTAVIGLTLHETAYAAEVVRGGILSVDPGQTEAAQ 208

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL+ R+  R +++PQAMRSI+P   +  +  LK +S+   +   DL+     + NQT 
Sbjct: 209 ALGLSRRRTLRRIVVPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQTY 268

Query: 362 QAIEIILIWMFIYLSLSIMIA 382
           Q I ++++    Y++++ ++ 
Sbjct: 269 QVIPLLMVATLWYIAVTTVLG 289


>gi|288554810|ref|YP_003426745.1| amino acid ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288545970|gb|ADC49853.1| amino acid ABC transporter permease [Bacillus pseudofirmus OF4]
          Length = 233

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 18/165 (10%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVR 286
           G P LV I   + L++  PVLG            EF S  +A    +S   AA+ AE+VR
Sbjct: 75  GTPLLVFI---FILYYGIPVLGV-----------EFKSAIVAGIVGISLNFAAYNAEVVR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S +++VPRGQ EAA +L +++ +  R V++PQA R  +PP  + +++++K +SLA  +  
Sbjct: 121 SAIMSVPRGQWEAAASLQMSYVQTLRRVIIPQATRIALPPTFNIFMDIVKGTSLASVITV 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L+     +  +T  ++ + +    IY  + I+I  F  RL  +
Sbjct: 181 QELLYSSRLVAGRTFDSMTMYITAALIYWVVCIIIGYFQERLEKR 225


>gi|296139502|ref|YP_003646745.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296027636|gb|ADG78406.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 298

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 60/88 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++   L+ Y  + IAEI+RSG+ ++P+GQ EAA ALGL   +  RL+LLPQA+ +++P
Sbjct: 166 FAAVVFGLTMYNGSVIAEIIRSGINSLPKGQSEAASALGLRKSQLMRLILLPQAITAMLP 225

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            L SQ +  LK+S+L   +G+ ++V  G
Sbjct: 226 ALISQMVVALKDSALGYIIGYTEIVRQG 253



 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 13/109 (11%)

Query: 51  NMEKSNLSLGIGFLSERAGFEI-------DQGIVPYTS-----DSSYATAILV-GFVNTF 97
             ++ +  + IGF++    F +       ++G + ++      DS + T  L+ G   T 
Sbjct: 39  KQQRRDTVVAIGFVAAMFAFAVWVLWVMGNKGQLEWSKWDMIVDSRFWTTYLIPGLWGTL 98

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             A   ++ A ++GT++G GRLS ++ V WI    VE+FR IP L++I 
Sbjct: 99  LAAVVSIVLAMVLGTVLGLGRLSDHRGVRWISGAVVELFRAIPVLILIL 147


>gi|16077406|ref|NP_388219.1| ABC transporter permease [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221308149|ref|ZP_03589996.1| hypothetical protein Bsubs1_01883 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312474|ref|ZP_03594279.1| hypothetical protein BsubsN3_01891 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317407|ref|ZP_03598701.1| hypothetical protein BsubsJ_01878 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321670|ref|ZP_03602964.1| hypothetical protein BsubsS_01909 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314008|ref|YP_004206295.1| putative ABC transporter permease [Bacillus subtilis BSn5]
 gi|1175692|sp|P42399|YCKA_BACSU RecName: Full=Probable amino-acid ABC transporter permease protein
           yckA
 gi|710628|dbj|BAA06425.1| homologue of glutamine permease of H. influenzae [Bacillus
           subtilis]
 gi|1805409|dbj|BAA08971.1| yckA [Bacillus subtilis]
 gi|2632623|emb|CAB12131.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320020282|gb|ADV95268.1| putative ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 226

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 13/172 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G+P LV++   + L+F  P +G    I  S V+       I  S  +AA+I
Sbjct: 65  LYIS--FMRGVPILVIL---FILYFGFPYIG----IEFSAVTAAL----IGFSLNSAAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RS + +V +GQ EAA +LGL++ +  R ++LPQ++R  +PPL +  L+L+K SSLA
Sbjct: 112 AEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIRIALPPLANVLLDLIKASSLA 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+     I  +    + + ++   IY ++  + A+F N L  K A
Sbjct: 172 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSIAAVFQNILEKKYA 223



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++F  M   T+IG  +   R+S   L+ W  ++Y+   R +P LV++F L
Sbjct: 23  VIKGIGYTLLISFVSMFAGTVIGLFISLARMSKLALLRWPAKLYISFMRGVPILVILFIL 82

Query: 149 Y 149
           Y
Sbjct: 83  Y 83


>gi|187730568|ref|YP_001881002.1| glutamine ABC transporter permease [Shigella boydii CDC 3083-94]
 gi|301020697|ref|ZP_07184765.1| glutamine ABC transporter permease protein [Escherichia coli MS
           69-1]
 gi|187427560|gb|ACD06834.1| glutamine ABC transporter, permease protein [Shigella boydii CDC
           3083-94]
 gi|300398508|gb|EFJ82046.1| glutamine ABC transporter permease protein [Escherichia coli MS
           69-1]
          Length = 219

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R ++L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYIIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|297156743|gb|ADI06455.1| putative glutamate ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 313

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 107/205 (52%), Gaps = 33/205 (16%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEK---TG-----KALPLLYISTFLIFGLPTLVLIALKY 242
           V S  LG+VL++   RLS H   +   TG     +A+PLL      I+ L  L L    Y
Sbjct: 79  VLSLALGVVLAV--GRLSDHKWVRLFTTGFIELFRAVPLL----ITIYALWVLFL---TY 129

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +            F G  T   EF +L + L+ Y  +  AE++R+G+ +VP+GQ EAA A
Sbjct: 130 K--------NDLGFTGDGT---EFWALVVGLTIYNGSVQAEVLRAGINSVPKGQSEAAYA 178

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-----VGGTII 357
           LG+   +    +L+PQ +R+++P + SQ +  LK++SL   + + +L+         T++
Sbjct: 179 LGMRKTQVMVTILIPQGVRAMLPTIISQLVVTLKDTSLGYVITYQELLYKVQHIAEVTVV 238

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIA 382
           N     +++I++   IY++L + ++
Sbjct: 239 NDESPYVQVIIVGGVIYVALCMALS 263


>gi|262403071|ref|ZP_06079631.1| ABC-type amino acid transport system permease component [Vibrio sp.
           RC586]
 gi|262350570|gb|EEY99703.1| ABC-type amino acid transport system permease component [Vibrio sp.
           RC586]
          Length = 265

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 89  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|317054240|ref|YP_004118265.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952235|gb|ADU71709.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 241

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 13/185 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + GK L   Y+  +L  G P L      +Q+ F   VL  F     +     F    +AL
Sbjct: 49  RAGKGLAFFYL--WLFRGTPVL------FQIIFVYNVLPGFGLRFSA-----FTCAVLAL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S    A++AEI+RSGL AV  GQ  A +ALG+T+ +  R ++LPQA R ++PP+ +Q ++
Sbjct: 96  SLNEGAYMAEILRSGLQAVKSGQRTAGMALGMTNAQIMRKIVLPQAARIVLPPMGNQMIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +LK+S+L   +   +L+ V     + + +  E +      YL L+ +  +F + L   + 
Sbjct: 156 MLKSSALVSVIAVQELLLVANQTASASFRYFEALCAAGIYYLLLTTLFMIFQSWLERTLD 215

Query: 394 LKEKK 398
            K+++
Sbjct: 216 PKQRR 220


>gi|229194739|ref|ZP_04321530.1| Amino acid ABC transproter, permease [Bacillus cereus m1293]
 gi|228588750|gb|EEK46777.1| Amino acid ABC transproter, permease [Bacillus cereus m1293]
          Length = 233

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 92  IALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG A+L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 152 FIIGLKDSSLVAYVGMAELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 211

Query: 391 KIALKE 396
           ++  KE
Sbjct: 212 RLQRKE 217


>gi|209549160|ref|YP_002281077.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209534916|gb|ACI54851.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 384

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S +T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + + 
Sbjct: 252 IGVSIFTSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIVNT 311

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++   K++SL   +G  DL+ +
Sbjct: 312 FIGTFKDTSLVTIIGMFDLLGI 333


>gi|90414858|ref|ZP_01222824.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90324036|gb|EAS40627.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 315

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 68/117 (58%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q    G S +     S  + +   +AA+IAEI+RSGL A+ +GQ EAA +LGL+     R
Sbjct: 170 QHFLFGSSKLWENLFSGVLCVGLISAAYIAEIIRSGLDAIAKGQWEAADSLGLSRWSRFR 229

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            V+ PQA   I+PPL  Q+++L+K+SS+   +   ++  VG  + N +G   EI L+
Sbjct: 230 DVIFPQAFAGIVPPLAGQFISLVKDSSIISLISIQEMTFVGSEMANSSGLIFEIWLL 286


>gi|270261784|ref|ZP_06190057.1| transporter [Serratia odorifera 4Rx13]
 gi|270045268|gb|EFA18359.1| transporter [Serratia odorifera 4Rx13]
          Length = 305

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 108/201 (53%), Gaps = 16/201 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +F F  G++L+L   RLS +        F+    +A+P+L +  FL + +      AL  
Sbjct: 76  IFGFAGGVLLALM--RLSANPVLVAVSWFYTWFFRAVPML-VQLFLWYNIA-----ALYP 127

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           ++    P LG+      +T+   F +  IAL  + +A+ AEIVR+G+ +V  GQ+EAA A
Sbjct: 128 RISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRAGIQSVGSGQLEAAKA 187

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG    +    V+LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T +
Sbjct: 188 LGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQIIYQRTYE 247

Query: 363 AIEIILIWMFIYLSLSIMIAL 383
            I ++L+    YL ++ ++++
Sbjct: 248 VIPLLLVATLWYLVMTSILSI 268


>gi|213967001|ref|ZP_03395151.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301385185|ref|ZP_07233603.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302062753|ref|ZP_07254294.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302130126|ref|ZP_07256116.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213928323|gb|EEB61868.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 220

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 90/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL+  +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLSEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|76801539|ref|YP_326547.1| glutamine/glutamate/polar amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76557404|emb|CAI48981.1| ABC-type transport system permease protein II 2 (probable
           substrates glutamine/glutamate/polar amino acids)
           [Natronomonas pharaonis DSM 2160]
          Length = 325

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 113/207 (54%), Gaps = 12/207 (5%)

Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           VLG+   +F      ++R +  +  + L L Y  T LI G P   L+A  + L++  P+ 
Sbjct: 113 VLGMFFGIFIAVPLSVARVYGSRPLRWLSLAY--TELIRGTP---LLAQLFVLYYGLPLS 167

Query: 252 GQFNFIGGSTVSP-EFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           G    + G  V P    ++++A+  +T   +A+ AE +RS L +V  GQ+ AA ++GL+ 
Sbjct: 168 GIIRELPGVGVGPVPRAAVWVAVIGFTINSSAYQAEYIRSALQSVDAGQLTAARSVGLSK 227

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++ R V+LPQ +R  IP  T++++ L+K SSLA  +   +L      I + T + +E+ 
Sbjct: 228 TESIRHVILPQGLRYAIPGWTNEFIYLIKYSSLAAFIAVPELFRRARNIGSDTFRYLEMY 287

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LI    YL+L + +++ M+    ++A+
Sbjct: 288 LIVALFYLALVLTLSVLMDSFEKRVAI 314


>gi|51893760|ref|YP_076451.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857449|dbj|BAD41607.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 268

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 12/218 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+  +A   +F  ++G+V  L  +R   +        L  LY+   ++ G P LV + L
Sbjct: 62  ITLQISALGILFGTLIGLVAGLLRSRKPSNLILWALYGLATLYVE--VVRGTPFLVQLYL 119

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F         F+ G  + P   +  IALS  + A++AEI R  + ++ RGQMEA 
Sbjct: 120 MYYGPF---------FLFGIDL-PAMTAGTIALSLNSGAYVAEIFRGAIESIDRGQMEAG 169

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGLT  +  R ++LPQA R  +PPL +++ +L+K SS+   +G AD++    T+    
Sbjct: 170 RSLGLTFAQTMRHIILPQAFRRALPPLANEFASLIKESSVISVLGVADIMFKTKTVGTAH 229

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               + +L+    YL L+ + +  +  L  ++   + +
Sbjct: 230 FAMFQALLVAAVYYLVLTGITSQLVRLLERRLGKSDSR 267


>gi|330808727|ref|YP_004353189.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376835|gb|AEA68185.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 220

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 11/167 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G P  VL+   +   +  P LG    IG       F +  + L+ +  + +AEIVR 
Sbjct: 64  LIRGTPVFVLVLACF---YMAPALGWQ--IGA------FQAGVLGLTLFCGSHVAEIVRG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L A+PRGQMEA+ A+GLT  ++   VLLPQA+R I+P   +    ++K S+L   +G A
Sbjct: 113 ALQALPRGQMEASQAIGLTFYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVA 172

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L+     II +T   +E  L   F++  ++  I L    +  ++AL
Sbjct: 173 ELLLSTQQIIARTFMTLEFYLFAGFLFFIINYAIELLGRHIEKRVAL 219


>gi|269954910|ref|YP_003324699.1| polar amino acid ABC transporter inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
 gi|269303591|gb|ACZ29141.1| polar amino acid ABC transporter, inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
          Length = 318

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 70/114 (61%), Gaps = 1/114 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   AA++AEIVR+GL +V  GQ EAA ALG+      R ++LPQAMR I+P
Sbjct: 148 FWAALLGLAFNEAAYLAEIVRAGLTSVDPGQAEAAKALGMKDTTILRRIVLPQAMRVIVP 207

Query: 326 PLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           P  ++ +++LK +SL +AV F  DL      I N+  Q I ++++    YL ++
Sbjct: 208 PTGNETISMLKTTSLVIAVPFTLDLFYATSAIGNRLYQPIPLLVVASIWYLVIT 261


>gi|15893407|ref|NP_346756.1| glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum ATCC 824]
 gi|15022937|gb|AAK78096.1|AE007524_1 Glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum ATCC 824]
          Length = 477

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 85/158 (53%), Gaps = 23/158 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL  + F+ FG+P L                       G  ++P    + IA+S  
Sbjct: 323 RGTPLLVQAFFIFFGIPGL----------------------SGLKINPVVAGI-IAVSLN 359

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++EI R G++++ +GQMEAA +LG+ +R A   ++ PQA++ +IP + +Q++  LK
Sbjct: 360 AGAYMSEIFRGGILSINQGQMEAARSLGIPYRTAMLKIVFPQAVKVMIPSIVNQFIISLK 419

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++S+   +G  +L + G  II  T +A +I LI   +Y
Sbjct: 420 DTSILSVIGIQELTNTGQIIIGATFKAFQIWLIVAIMY 457


>gi|329906186|ref|ZP_08274377.1| Glutamate Aspartate transport system permease protein gltJ
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327547319|gb|EGF32155.1| Glutamate Aspartate transport system permease protein gltJ
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 247

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 60/86 (69%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L  +T++ +A  V +G+ A+PRGQ  A  ALGLT  +  R VLLP A R ++P
Sbjct: 108 FITAVICLGFFTSSRVAVQVSAGIQALPRGQTLAGTALGLTLPQTYRHVLLPMAFRIVLP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
           PLTS++LN++KNSS+A+ +G  +L +
Sbjct: 168 PLTSEFLNIIKNSSVALTIGLMELTA 193



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 38/75 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y   ++ G V T   A +  + A  IG +VG  R   N+    +   YVE+FRNIP L
Sbjct: 19  GTYMDTLVSGLVWTLATALTAWVMALFIGAIVGTIRTMPNRWAVRLANGYVELFRNIPLL 78

Query: 143 VVIFFLYKSVLSVLP 157
           V +F  Y  +  ++P
Sbjct: 79  VQMFLWYFVMPELVP 93


>gi|258623749|ref|ZP_05718708.1| polar amino acid ABC transporter, permease protein [Vibrio mimicus
           VM603]
 gi|258583967|gb|EEW08757.1| polar amino acid ABC transporter, permease protein [Vibrio mimicus
           VM603]
          Length = 265

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 89  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|241895266|ref|ZP_04782562.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871572|gb|EER75323.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 494

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 77/132 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IA+   +AA++AEI+RSG+ AVP GQ EAA +LG T  +  R ++LPQA+++I+P
Sbjct: 360 FLAGAIAMFLNSAAYVAEIIRSGIQAVPDGQTEAARSLGFTKNQTMRYMILPQAIKNILP 419

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++++ ++K  S+   +G  +L      +   + +    ++I   IY  L+  I+  +
Sbjct: 420 ALGNEFVTVIKEGSVVSVIGVGELTFQASVVQGASFKPFLPLVITAAIYFILTFGISRLL 479

Query: 386 NRLNAKIALKEK 397
           N    K+   +K
Sbjct: 480 NLFEKKLHKSDK 491


>gi|86153193|ref|ZP_01071397.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|88597558|ref|ZP_01100792.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562521|ref|YP_002344300.1| putative amino acid ABC tansporter permease [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|85842919|gb|EAQ60130.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|88190150|gb|EAQ94125.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360227|emb|CAL35022.1| putative amino acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284926135|gb|ADC28487.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 247

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|229168897|ref|ZP_04296614.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH621]
 gi|228614489|gb|EEK71597.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH621]
          Length = 219

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 78/129 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A S  + A+++E++R+G+ AV +GQ EAA+ALG+ + K  + ++ PQA+++I
Sbjct: 87  PAFLAAVLAFSLNSGAYMSEVIRAGIQAVDKGQTEAAMALGIPYGKMMKNIIFPQALKNI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++  L K S++   +G  DL+     +  +T + +E +L    IY  L I++ L
Sbjct: 147 LPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFKYLEPLLFVGLIYYMLVIILTL 206

Query: 384 FMNRLNAKI 392
               +  ++
Sbjct: 207 VGKAIEGRM 215


>gi|167043235|gb|ABZ07942.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_ANIW141L21]
          Length = 774

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 72/126 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S   AL   + A+  E +R  + A+P GQMEA  ++GL + +  R V++PQA+R  IP
Sbjct: 637 YISAIFALGLNSGAYQCETIRGAIAAIPSGQMEAGRSIGLNYMQTMRRVIMPQAIRICIP 696

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+ ++ +NL+ NSSLA+ +G+A+L   G   I  T Q      + +  Y  ++  +AL +
Sbjct: 697 PMGNEMVNLVLNSSLAMVIGYAELTRKGKLAIAITWQVFWGWGMVLISYFIVTWTLALLL 756

Query: 386 NRLNAK 391
             L  K
Sbjct: 757 RYLENK 762


>gi|146340447|ref|YP_001205495.1| amino acid ABC transporter membrane protein [Bradyrhizobium sp.
           ORS278]
 gi|146193253|emb|CAL77269.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Bradyrhizobium sp. ORS278]
          Length = 222

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 65/114 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++    LS Y  AF AEI+R  + +VPRGQ +AA ALGL   +  RLV+LPQA++ +
Sbjct: 89  PAHVAAVTVLSLYGGAFYAEIIRGSIESVPRGQWDAARALGLRPWRMMRLVILPQALKPM 148

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           + P  +Q +  LKN+SL   +   DLV     I   T + +E+  I   IY ++
Sbjct: 149 LAPYVNQSVTQLKNTSLVSVIAVPDLVYNATLINADTYRPLEVYTIIAIIYFAI 202



 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 10/90 (11%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIP--------ATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++  AIL  + + FW+     +          TIIG LVG  RL    ++ W+   Y+
Sbjct: 2   NYTWDFAILGKYSHLFWVGLGWTMAYTLGTVLLGTIIGLLVGIIRLRRPVVIDWLLIAYI 61

Query: 134 EVFRNIPPLVVIFFLYKS--VLSVLPIPDH 161
           E+FR  P LV I + Y +  V+  + IP H
Sbjct: 62  ELFRCTPLLVQIIWFYYAFPVVIGINIPAH 91


>gi|15888723|ref|NP_354404.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156465|gb|AAK87189.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 217

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 67/114 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  ++LS Y +A++AEI R  + AVP+ Q EA+ +L LT  +  R V+LPQA+R  
Sbjct: 83  PPLLAASVSLSVYVSAYLAEIWRGSIQAVPKPQWEASASLALTRFQQYRYVILPQALRLS 142

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           +PP     + L+KN+S+   VGF +L   G  + N T +  ++  +   +Y ++
Sbjct: 143 LPPTVGFLVQLVKNTSIVSVVGFVELSRAGQLVNNATFRPFQVFFVVALLYFAI 196


>gi|159904018|ref|YP_001551362.1| ABC-type amino acid transport system, permease component
           [Prochlorococcus marinus str. MIT 9211]
 gi|159889194|gb|ABX09408.1| ABC-type amino acid transport system, permease component
           [Prochlorococcus marinus str. MIT 9211]
          Length = 339

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 18/222 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT+   A   + +F LG++ ++   R S HF  K        Y+S   I  L  + LIA
Sbjct: 132 TLTLFLMASSALIAFPLGMIFAI--GRQSEHFLIK--------YLSAIYIDTLRAIPLIA 181

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +      P+   F    G  ++   +   IA + + +A++AE +R GL A+P  Q+EA
Sbjct: 182 ILFFGQLLIPLFLPF----GLEIN-RVLRAVIAFALFVSAYVAEDIRGGLQAIPTSQIEA 236

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGLT  +  + ++LPQA+   IP L +Q + LL+N+SL   +G  +L+ +  +I+  
Sbjct: 237 AKALGLTDFQIKQFIVLPQAITIAIPALANQAIGLLQNTSLMAILGLVELLGISRSILAN 296

Query: 360 T---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               G+ +E+ +    IY  +  +IA+    +  ++ + +  
Sbjct: 297 PEFIGRYVEVYVWLALIYWLVCTVIAILSRHIEQRMKIGKSH 338


>gi|310829835|ref|YP_003962192.1| amino acid ABC transporter [Eubacterium limosum KIST612]
 gi|308741569|gb|ADO39229.1| amino acid ABC transporter [Eubacterium limosum KIST612]
          Length = 218

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 20/175 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ FGLP L             P +G+F       V   F +  IA    
Sbjct: 61  RGTPLLLQLMFVYFGLPLL-------------PGVGKF------LVFDRFSAACIAFGLN 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+ +GQ EA+  LGLT  +    V++PQ +R  +P ++++ + LLK
Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEASKVLGLTKFETMTRVVIPQMIRVCLPSISNETITLLK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++L   +G A+++    T +N+       + +   IYL ++ ++     +L  K
Sbjct: 162 DTALVTTIGVAEIIHYAKTAVNRDANPFAFV-VAAAIYLVINFVLTFIFKKLEKK 215


>gi|301629417|ref|XP_002943836.1| PREDICTED: hypothetical protein LOC100485408 [Xenopus (Silurana)
           tropicalis]
          Length = 502

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 12/207 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++LGIVL  F   L+R    +  +    +YI  F    LP LVL+   Y L    P + 
Sbjct: 31  TWLLGIVLGFFLA-LARQSELRWLRNSAGVYIWFFR--SLPLLVLLIFVYNL----PQV- 82

Query: 253 QFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              F   S V S  + +  IAL    AA+IAEI R GL+AV +GQ EA  ALG+ +R   
Sbjct: 83  ---FPSTSVVLSNPYSAGLIALVLSEAAYIAEIHRGGLLAVVKGQREAGKALGVGYRGVQ 139

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           RL+++PQA+R  +P L ++Y+ ++K +SL   +  ++++ VG  +  Q    +E +L   
Sbjct: 140 RLIVVPQALRVALPTLANEYITIVKLTSLVSVISLSEILLVGQQLYTQNFLVMETMLAVA 199

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
           F Y+ +  + +  +  L   + +  +K
Sbjct: 200 FYYVFIVTVFSWLLRVLENHLDVTRRK 226


>gi|257460118|ref|ZP_05625222.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Campylobacter gracilis RM3268]
 gi|257442559|gb|EEV17698.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Campylobacter gracilis RM3268]
          Length = 222

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 109/201 (54%), Gaps = 14/201 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+LG+VL++  T ++R  + K  K L  +YI  F   G P LV +   + ++F  P+
Sbjct: 31  IISFLLGLVLAVL-TAVARIANFKILKQLSEIYIWIFR--GTPLLVQL---FIVYFGLPI 84

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G    +  + +        I  S    A+ +E VR+ +++VP+GQ EAA +LG+++ + 
Sbjct: 85  VGITLDVWAAAI--------ITFSLNIGAYASEAVRAAILSVPKGQWEAATSLGMSYAQI 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++ PQA R  +PPL++ +++ LK++SL  ++   D+  V   I  +    + + ++ 
Sbjct: 137 LRRIIAPQAARISLPPLSNIFISTLKDTSLVASITMVDMFMVAQRIAARAFDPLTLYVLA 196

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
              YL++  ++    ++L  +
Sbjct: 197 ALFYLAVCTLLTFLQSKLERR 217


>gi|218887772|ref|YP_002437093.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758726|gb|ACL09625.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 316

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 14/142 (9%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    + G+AL + Y+ T  +   P L+ + + Y      PVLG   F  G         
Sbjct: 143 RQSGSRVGRALAVAYVET--VRNTPLLIQLFVVY--FVLAPVLGLGRFAAG--------- 189

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+IAEI+R+G+++VP GQ EA+ +LG+        V+LPQA R+ +PPLT
Sbjct: 190 -VLALSLFEGAYIAEILRAGILSVPTGQWEASRSLGMDVPGTYMEVVLPQAARTALPPLT 248

Query: 329 SQYLNLLKNSSLAVAVGFADLV 350
            Q ++L+K+SSL   +   DL 
Sbjct: 249 GQLVSLVKDSSLVSTIALHDLA 270


>gi|153827815|ref|ZP_01980482.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|148876660|gb|EDL74795.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
          Length = 266

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|104783490|ref|YP_609988.1| general amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95112477|emb|CAK17204.1| general amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 365

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           PE MS        I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + +A  LV+LP
Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QA++ +IP + + ++ L K++SL + +G  DL++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315


>gi|325685063|gb|EGD27198.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 485

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200
           +V  +  K  +    + D SI+   G+  +N G     L M     I   + + V G++L
Sbjct: 252 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 308

Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +      + +H          + +P++ ++ F+  G+PTL    L ++L          
Sbjct: 309 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 354

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                    P F +  + L     A+I  IVR G  +V  GQ EAA +LGL + KA   V
Sbjct: 355 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 405

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQ  + +IP L +Q++  LK++S+  A+G  DL   G  +I Q  Q  ++ LI   +Y
Sbjct: 406 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGANLIAQNFQGFKMWLIIAVMY 465

Query: 375 LSLSIMIALFMNRLNAKI 392
           L +  ++    N +  K+
Sbjct: 466 LIIITLLTWLSNYIQKKM 483


>gi|152970960|ref|YP_001336069.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238895476|ref|YP_002920211.1| putative amino-acid ABC transport system permease component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|262043450|ref|ZP_06016573.1| L-cystine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|330000993|ref|ZP_08303864.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955809|gb|ABR77839.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238547793|dbj|BAH64144.1| putative amino-acid ABC transport system permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259039192|gb|EEW40340.1| L-cystine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|328537828|gb|EGF64022.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 222

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG +L+L   R+S  +  K    L  +YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLVLGFILALM--RMSPVWPVKW---LARMYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 194 LIYWVMATVLSSLQNYFENQLNRQERD 220



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R+Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPVKWLARMYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107


>gi|89099965|ref|ZP_01172836.1| amino acid ABC transporter, permease protein [Bacillus sp. NRRL
           B-14911]
 gi|89085357|gb|EAR64487.1| amino acid ABC transporter, permease protein [Bacillus sp. NRRL
           B-14911]
          Length = 214

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 26/196 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFD 247
           +F F++G++ +LF  RLS           PL +I+ +   L+ G P LV      QL F 
Sbjct: 27  LFGFIIGLITALF--RLS--------PIPPLRWIAIWFINLVRGTPFLV------QLFFI 70

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              L   +FI    V+       + ++    A+IAEI+R+G+ ++ +GQ EAA  LGLT 
Sbjct: 71  YFGLNSLSFISLEPVTAGI----VGVAINAGAYIAEIIRAGIQSIDKGQTEAARTLGLTS 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQA+R ++P   +Q +  LK++SL   +G A+L   G  +++ T +  +  
Sbjct: 127 TQTMRYIILPQALRRMLPTFVNQAIISLKDTSLLSVIGIAELTQRGQVVVSATYEPFK-- 184

Query: 368 LIWMFIYLSLSIMIAL 383
            IW  + L   I+I L
Sbjct: 185 -IWGMVALMYFILIYL 199


>gi|115524737|ref|YP_781648.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris BisA53]
 gi|115518684|gb|ABJ06668.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris BisA53]
          Length = 500

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      + + I ++ +  A+ AE+VR GL A+PRGQ EA+ ALGL++ K T L++
Sbjct: 353 FLPGNFTVDGMVRVLIGIALFAGAYNAEVVRGGLQAIPRGQAEASSALGLSYWKTTGLIV 412

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA+R +IP L + ++ L K++SL   V   DL+ 
Sbjct: 413 LPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLG 448


>gi|157370602|ref|YP_001478591.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322366|gb|ABV41463.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 305

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 108/201 (53%), Gaps = 16/201 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +F F  G++L+L   RLS +        F+    +A+P+L +  FL + +      AL  
Sbjct: 76  IFGFAGGVLLALM--RLSANPVLVAVSWFYTWFFRAVPML-VQLFLWYNIA-----ALYP 127

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           ++    P LG+      +T+   F +  IAL  + +A+ AEIVR+G+ +V  GQ+EAA A
Sbjct: 128 RISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRAGIQSVGSGQLEAAKA 187

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG    +    V+LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T +
Sbjct: 188 LGYRRGQILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQIIYQRTYE 247

Query: 363 AIEIILIWMFIYLSLSIMIAL 383
            I ++L+    YL ++ ++++
Sbjct: 248 VIPLLLVATLWYLVMTSILSI 268


>gi|83950535|ref|ZP_00959268.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83838434|gb|EAP77730.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 218

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 73/124 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IA   + AA+ +EI+R+G+ ++ +GQ+ AA A+GL++ +  R V+LPQA R++IP
Sbjct: 90  FYSALIAFVMFEAAYYSEIIRAGIQSIRQGQVHAAQAVGLSYWQTQRYVVLPQAFRNMIP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q + L +++SL   V   D ++    +    G+ +E+ +    +Y  +    +LF+
Sbjct: 150 ILVTQGIILFQDTSLVFVVSLRDFMTASSIVARTEGRLVEMYIFAALVYFVICFAGSLFV 209

Query: 386 NRLN 389
            RL 
Sbjct: 210 RRLK 213


>gi|301050727|ref|ZP_07197586.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300297595|gb|EFJ53980.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
          Length = 222

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARGALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|260461178|ref|ZP_05809427.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033212|gb|EEW34474.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 230

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  TAA+ +EI+R  +  VPRG +EAA A G+T  +  RLV+LP A+R  IP  +++
Sbjct: 102 IALSLNTAAYGSEILRGAIQGVPRGLVEAASAFGMTRLQTLRLVVLPLALRQAIPSYSNE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + ++K +SLA  V   ++  +   +I+QT +AIE+ +    IYL+++  I   +N L 
Sbjct: 162 IILMVKGTSLASIVTLMEVTGIAQGLISQTYRAIEVFVAAGAIYLTINFTIISALNALE 220


>gi|229084062|ref|ZP_04216355.1| Amino acid ABC transporter [Bacillus cereus Rock3-44]
 gi|228699239|gb|EEL51931.1| Amino acid ABC transporter [Bacillus cereus Rock3-44]
          Length = 214

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 95/157 (60%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +FV+GI+L++F T L+R  + +  + +  +Y+S  +I G P LV +   + +
Sbjct: 15  TTIPLSIITFVIGIILAIF-TALARISNSRILQWIARIYVS--IIRGTPLLVQL---FII 68

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          + P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 69  FYGLPTLN-------IEIDP-YPAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + ++LPQA R  IPPL++ +++L+K++SLA
Sbjct: 121 MTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 157


>gi|206580951|ref|YP_002237707.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|290508767|ref|ZP_06548138.1| cystine transport system permease [Klebsiella sp. 1_1_55]
 gi|206570009|gb|ACI11785.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|289778161|gb|EFD86158.1| cystine transport system permease [Klebsiella sp. 1_1_55]
          Length = 222

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG +L+L   R+S  +  K    L  +YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLVLGFILALM--RMSPLWPVKW---LARMYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAIASIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 194 LIYWVMATVLSSLQNYFENQLNRQERD 220



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R+Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPLWPVKWLARMYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107


>gi|229528071|ref|ZP_04417462.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229334433|gb|EEN99918.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
          Length = 266

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|315929979|gb|EFV09130.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 247

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 69/94 (73%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L ++
Sbjct: 123 LALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANE 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 183 FISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|262164524|ref|ZP_06032262.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262026904|gb|EEY45571.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 265

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 16/159 (10%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFM 267
           R      G+AL   YI+  ++   P LV I L Y             F+ G  +    F 
Sbjct: 89  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLY-------------FVFGPVIGLDRFA 133

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPL
Sbjct: 134 TAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPL 193

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           T++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 194 TNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|229590087|ref|YP_002872206.1| putative ABC-type amino-acid transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229361953|emb|CAY48853.1| putative ABC-type amino-acid transporter permease protein
           [Pseudomonas fluorescens SBW25]
          Length = 220

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+ +  + ++EIVR  L A+PRGQ+EA  A+GLT  ++   VLLPQA+R I+P
Sbjct: 91  FQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLTFYQSLGYVLLPQALRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I LF 
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFVINYAIELFG 210

Query: 386 NRLNAKIAL 394
             +  ++AL
Sbjct: 211 RYIEKRVAL 219


>gi|326803926|ref|YP_004321744.1| putative glutamine ABC transporter, permease protein GlnP
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651679|gb|AEA01862.1| putative glutamine ABC transporter, permease protein GlnP
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 215

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +   A++ + +  I+EI+R G+ AVP+GQMEA ++ G T  +   L++LPQA+RS++P
Sbjct: 88  FWAAVAAMTIFESCMISEIIRGGMNAVPKGQMEAGLSTGFTRGQVIILIILPQAIRSMLP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALF 384
            + SQ + L+K++SLA  +   +L      I  Q T   I I +   F+Y     +++  
Sbjct: 148 SIVSQLIALIKDTSLATVISLPELTHNARIIYGQETSYVIPIFVAMTFLYWITCFLLSRL 207

Query: 385 MNRLN 389
             RL 
Sbjct: 208 AKRLK 212


>gi|260577144|ref|ZP_05845121.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259020618|gb|EEW23937.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 434

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 56/78 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA++AE+VR G+ A+PRGQ EAA ALGL +  A RL++LPQA++  IP + S 
Sbjct: 304 ILVTIFAAAYLAEVVRGGMAALPRGQYEAADALGLDYWSAERLIILPQALKISIPSIVST 363

Query: 331 YLNLLKNSSLAVAVGFAD 348
           +++L K+++L   VG  D
Sbjct: 364 FISLFKDTTLVSFVGLLD 381


>gi|317053433|ref|YP_004119200.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953172|gb|ADU72644.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 230

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 26/197 (13%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKY--------------QLHFDKPVLGQFNFIGGST 261
           G AL ++ +S F     P LV++A  Y                +F  P L Q+  + GS+
Sbjct: 40  GTALAIMRLSRF-----PLLVMLASSYVNLMRSLPLVLVIFWFYFLVPYLLQW--LTGSS 92

Query: 262 ----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
               V P F S  I  + + A +  EIVRSG+ ++PRGQ  AA+ALGLT  ++   V+LP
Sbjct: 93  FPVRVDP-FWSSVITFTLFEACYFCEIVRSGIQSLPRGQSSAALALGLTPAQSLLYVILP 151

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QAMR+++P   +Q + L +++SL   +   D +     +  + G+ +E+ L    +Y  +
Sbjct: 152 QAMRNMLPLFLTQTIILFQDTSLVYVLSITDFLGAAAKVAQRDGRLLEMYLFAAAVYFLI 211

Query: 378 SIMIALFMNRLNAKIAL 394
           S   +  +  L  +I++
Sbjct: 212 SYGASCGVRYLQKRISI 228


>gi|153216003|ref|ZP_01950225.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124114516|gb|EAY33336.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
          Length = 265

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 89  RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|110633468|ref|YP_673676.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110284452|gb|ABG62511.1| general L-amino acid ABC transporter membrane protein
           [Chelativorans sp. BNC1]
          Length = 498

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 61/87 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + +   I ++ ++AA++AE++R GL A+P+GQ E A ALGL + +  RLV++PQA++ +I
Sbjct: 360 QLLRALIGVAIFSAAYMAEVIRGGLQAIPKGQYEGAEALGLGYWQMMRLVIMPQAIKLVI 419

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351
           P + + ++ L K++SL   +G ADL+ 
Sbjct: 420 PGIVNTFIGLFKDTSLVYIIGLADLLG 446


>gi|327486002|gb|AEA80408.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 265

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 89  RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|323165731|gb|EFZ51517.1| glutamine transport system permease protein glnP [Shigella sonnei
           53G]
          Length = 219

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FTAAVVTIMINSGAYIAEITRGTVLSIHKGFREAGLALGLSRWETIRYVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|308187411|ref|YP_003931542.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308057921|gb|ADO10093.1| putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 307

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 28/234 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLV 236
           +T+   A   V  F  G VL+L   RLS +         P+L    +  T+   G+P LV
Sbjct: 65  MTLQLTAISVVLGFAFGTVLALM--RLSSN---------PVLVAVSWAYTWFFRGVPMLV 113

Query: 237 LIALKY-------QLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            + L Y       ++    P LG+ ++    + VSP F +  IAL  + +A+ AEIVR+G
Sbjct: 114 QLFLWYNIAALYPRIALSIPGLGELWSAQSNALVSP-FSAAVIALVMHQSAYAAEIVRAG 172

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  GQ+EAA ALG    +  R  +LPQAMR+I+PP  ++ +  LK +++   +   D
Sbjct: 173 IQSVGNGQIEAARALGYRPAQIFRHTVLPQAMRAIMPPAGNEIIGQLKTTAVVSVISLQD 232

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK-IALKEKK 398
           ++     I  +T + I ++L+    YL ++ ++++   ++ R   + +  +EK+
Sbjct: 233 VLFSAQIIYQRTYEVIPLLLVATLWYLLMTSVLSVGQYYVERYFGRGVTRREKR 286


>gi|319761573|ref|YP_004125510.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330823441|ref|YP_004386744.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317116134|gb|ADU98622.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329308813|gb|AEB83228.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 218

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 111/223 (49%), Gaps = 38/223 (17%)

Query: 188 KIFVFSFVL----GIVLSLFATRLSRHFHEKTG---------KALPLLYISTFLIFGLPT 234
           K+FV +  L    G+VL+L   RLSR +   +G         +  PL+    F+ F LP 
Sbjct: 21  KLFVITLALAVPLGLVLAL--ARLSR-WKALSGAVNGYIWLMRGTPLMLQMLFIYFALPF 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + ++ ++                      P+F +   A +   AA+ AEI R+G+ +V R
Sbjct: 78  VPVVGVRL---------------------PDFPAAVTAFALNYAAYFAEIFRAGIQSVDR 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG+++ +  R ++LPQ +RSI+PP++++ + L+K++SL   +   DL+    
Sbjct: 117 GQYEAAKVLGMSYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAAR 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I+ +       I+   F YL +++++     RL  + A  ++
Sbjct: 177 GIVQRDFTTTPFIVAAAF-YLLMTLVLTWGFQRLEQRYAKYDQ 218


>gi|15890699|ref|NP_356371.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158968|gb|AAK89156.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 252

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F  +   L  Y  AF++E+VR+G++A+  GQM+AA ALG ++  A R ++LPQA+ ++
Sbjct: 97  PSFAIMLATLVVYQGAFLSEVVRAGIVALGVGQMDAAKALGHSYGSAMRFIILPQALYNM 156

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIA 382
           IP + S ++  +K+++L   +   DL      + NQ   Q  ++ LI   +Y +L   + 
Sbjct: 157 IPSMISTFVATIKDTTLGYVINVPDLTFAASQVNNQLLTQPFQVFLILAVVYYALCWSLT 216

Query: 383 LFMNRLNAKIALKE 396
              N +  +IA + 
Sbjct: 217 YLANAVERRIARRR 230


>gi|229522563|ref|ZP_04411979.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229340548|gb|EEO05554.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
          Length = 266

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALTLFQGAYTAEVFRGGLNSIAQGQYEAAHSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|218517086|ref|ZP_03513926.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 170

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 24/178 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +  F  F LP       +  L  DK                   S  + LS Y
Sbjct: 15  RNLPILVLVLFAFFALP-------QMGLRLDK-----------------MKSFVLVLSLY 50

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AE+ R+GL+++PRG  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K
Sbjct: 51  SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 110

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SLA A+   +L      I  ++ + IE  ++   +Y++   +IA  M  +  ++AL
Sbjct: 111 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLAL 168


>gi|300716303|ref|YP_003741106.1| ABC polar amino acid family transporter, inner membrane subunit
           [Erwinia billingiae Eb661]
 gi|299062139|emb|CAX59255.1| ABC polar amino acid family transporter, inner membrane subunit
           [Erwinia billingiae Eb661]
          Length = 305

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 24/213 (11%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL--YISTFLIF--GLPTLVLIALKYQL 244
           I + + VLG+V+++   RLS +         PLL  +   ++ F  G P LV +   Y L
Sbjct: 96  IMLLAIVLGVVIAVM--RLSTN---------PLLSGFSGGWIWFFRGTPVLVQLIFWYNL 144

Query: 245 HFDKPVL-----GQFNFIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
               P +     G F+   GS    ++P + +  + L    +A++AEI+R+G+ +V  GQ
Sbjct: 145 AALYPTVNIGIPGVFSLWQGSMNDLITP-WTAAILGLGLNESAYMAEIIRAGISSVDDGQ 203

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALG+T  +  + V+LPQA+  IIPP  +Q + +LK +SL   +  +DL+     I
Sbjct: 204 QEAARALGMTKNQYLKRVILPQAVPFIIPPTGNQIIGMLKTTSLVSVISLSDLLYSAQAI 263

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            ++T + I ++++    YL  + +++    R+ 
Sbjct: 264 YSRTYENIPLLIVACIWYLVATTLLSAAQTRIE 296



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 34/66 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL G V T WL    M+ A ++G ++   RLS N L++     ++  FR  P LV 
Sbjct: 78  FSPTILSGLVTTSWLTLVIMLLAIVLGVVIAVMRLSTNPLLSGFSGGWIWFFRGTPVLVQ 137

Query: 145 IFFLYK 150
           + F Y 
Sbjct: 138 LIFWYN 143


>gi|171318277|ref|ZP_02907438.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171096541|gb|EDT41437.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 248

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFIWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRSVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAALIYLGLNFIVVRLLGALEWRLS 224


>gi|170743938|ref|YP_001772593.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168198212|gb|ACA20159.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 385

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 62/95 (65%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G       +   I ++ ++AA++AE+VR GL A+P+GQ E A +LGL++ +  RLV+
Sbjct: 238 FLPGDITVDRLLRPLIGVALFSAAYMAEVVRGGLQAIPKGQTEGANSLGLSYWQGMRLVI 297

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           LPQA+R +IP + + ++ L K+++L   VG  D +
Sbjct: 298 LPQALRIVIPGIVNSFIALFKDTTLVSIVGIFDFI 332


>gi|300172546|ref|YP_003771711.1| glutamine ABC transporter permease [Leuconostoc gasicomitatum LMG
           18811]
 gi|299886924|emb|CBL90892.1| glutamine ABC transporter, permease protein [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 219

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 25/178 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL I  F+ F LP       K  +H                  P F +  IA+S +
Sbjct: 66  RNLPLLLIIFFVYFALP-------KIGIHL-----------------PIFWATVIAMSTF 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A +AEIVR GL +V  GQ E A A GL++ +    ++LPQA + +IPP+ SQ ++L+K
Sbjct: 102 ESAMLAEIVRGGLESVDNGQFEGARANGLSNMQTMIYIVLPQAYKKMIPPIISQLISLVK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLNAKIA 393
           ++SLA+ +  +++   G  +  Q    I  +LI +  +Y  L+  ++L     + K+A
Sbjct: 162 DTSLALGIVLSEMTYRGQIVYAQNSTYIVPVLIAITLVYFLLNYGLSLLAKWADHKLA 219


>gi|291454549|ref|ZP_06593939.1| glutamate transporter permease [Streptomyces albus J1074]
 gi|291357498|gb|EFE84400.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 221

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 257 IGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           +GG  V    F    + LS YTAAF+ E VRSG+  VP GQ EAA ALGL   +   L++
Sbjct: 81  LGGEGVKEVAFRMAVLGLSTYTAAFVCESVRSGINTVPVGQAEAARALGLNFTQVLTLIV 140

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           LPQA R++I PL +  + L KN+++A A+G  +
Sbjct: 141 LPQAFRTVIGPLANVLIALTKNTTVAAAIGVGE 173


>gi|253690355|ref|YP_003019545.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756933|gb|ACT15009.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 227

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 21/221 (9%)

Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           FP + M     +F+      F+ VLG++L+L      R         +  LYIS F   G
Sbjct: 16  FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYISLFR--G 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P+LV +   + ++F  P L    F G S +     ++ I  S  T+A++AEI R+GL +
Sbjct: 69  IPSLVQL---FIIYFGLPQL----FPGLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLSS 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+G ++L +
Sbjct: 121 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 180

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  I  ++ +  E  L+   IY  + I+ +    +L  K+
Sbjct: 181 EGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKL 221


>gi|170695848|ref|ZP_02886989.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139272|gb|EDT07459.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 251

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +GQF  I  S + P     +M   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  MGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ +I   ++ L  +++
Sbjct: 198 FICAALIYLFLNFVIVRALSMLETRLS 224


>gi|89899054|ref|YP_521525.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343791|gb|ABD67994.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 222

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 29/177 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A PLL    FL FGLP+                           + PE +   IALS  
Sbjct: 65  RATPLLAQLYFLYFGLPSF------------------------GVIMPETVIGIIALSIN 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++EI+RSG++++P GQ+EA+ + G+ + +  RL++LPQA+R ++ PL  Q + L+K
Sbjct: 101 SGAYVSEIIRSGIMSIPHGQVEASASSGMNYWQQMRLIILPQALRPMVSPLIGQAIVLVK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMIALFMNRLN 389
           +SSL   +   +L   G T+ N     +E +      ++ IY  L +M A +M R+N
Sbjct: 161 DSSLLSLISVLELTRAGQTLANDRFMPVEGLATTAVGYLIIYFGLKLMAAAWM-RIN 216


>gi|121604975|ref|YP_982304.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593944|gb|ABM37383.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 227

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 27/212 (12%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLP 233
           ++ TL +  +A   VF F+LG+  +L           KTG ++ L  +++    LI   P
Sbjct: 21  AWTTLALSLSAT--VFGFLLGVFCAL----------TKTGHSVWLARVASAYVELIRNTP 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y   F    LG    +G       F +  IAL     A+ +EIVR+G+ ++P
Sbjct: 69  LLVQIFIVY---FGLSSLGLQ--VGA------FTAATIALVVNVGAYTSEIVRAGIDSIP 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA  + L+  +  R V+LP A+  + P LTSQY+ L+  SS+   +   +L +V 
Sbjct: 118 RGQMEAAECMALSRWQTLRHVVLPPAIERVYPALTSQYVLLMLASSICSQISAEELTAVA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
             I + T +++E  LI    YL +S +M A+F
Sbjct: 178 NRIQSDTFRSVETYLIVAGAYLLMSLVMRAIF 209


>gi|322387247|ref|ZP_08060857.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
 gi|321141776|gb|EFX37271.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
          Length = 543

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 71/123 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 406 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 465

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 466 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRYIEKRM 525

Query: 393 ALK 395
            + 
Sbjct: 526 DMD 528


>gi|153801933|ref|ZP_01956519.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|124122508|gb|EAY41251.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
          Length = 266

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSHSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|319440318|ref|ZP_07989474.1| putative ABC transport system, permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 323

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 58/82 (70%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+  ++ L    +A++AEIVR+G+ +VP GQ EA+ ALG+T  +  R  +LPQAMR IIP
Sbjct: 150 FVLAFVGLGLNESAYMAEIVRAGVQSVPEGQTEASKALGMTWWQTMRRTVLPQAMRIIIP 209

Query: 326 PLTSQYLNLLKNSSLAVAVGFA 347
           P  ++ +++LK +SL +AV +A
Sbjct: 210 PTGNELISMLKTTSLVIAVPYA 231


>gi|218681463|ref|ZP_03529350.1| arginine transporter permease subunit ArtQ [Rhizobium etli CIAT
           894]
          Length = 223

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 12/175 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFI 281
           Y+S  LI GLP L++I   + + +   VL     + GS V  + MS  IA LS   AA++
Sbjct: 55  YVS--LIRGLPELLVI---FLIFYGGTVL--LTNLTGSYVEVDAMSAGIAALSVVAAAYL 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+R  L++V  GQ EAA+ALG    +A RLV+LPQ M   +P L +Q+L +LK S+L 
Sbjct: 108 TEILRGALLSVSAGQWEAALALGFRRPRAFRLVILPQMMARALPGLGNQWLVILKESALV 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMNRLNAKI 392
             VG  +L+         T Q +   L    +Y+S+    S+++  + +RL + +
Sbjct: 168 SVVGLEELMRKSVVAAGATHQPLAFYLTAAGLYVSITGVSSLLLKAYESRLTSHL 222


>gi|163858764|ref|YP_001633062.1| amino acids ABC transporter, permease protein [Bordetella petrii
           DSM 12804]
 gi|163262492|emb|CAP44795.1| amino acids ABC transporter, permease protein [Bordetella petrii]
          Length = 230

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 30/186 (16%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGKALPLLY 223
           P G  +   GL+  +L +         +F +G++L+L   R+S H  F+      +    
Sbjct: 21  PMGGLVATVGLALVSLAL---------AFPIGVLLAL--GRISSHKIFYWPATAVV---- 65

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              +++ GLP ++ I   Y   F  P+L       G+TVS   +++  AL  Y  A+++E
Sbjct: 66  ---YVVRGLPLIMFIFWAY---FFLPLLI------GNTVS-GVVTMAAALIIYEGAYLSE 112

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSG+ A+P GQMEA  +LGL+H +A R ++LPQA+ + IP + SQ+++ +K +SL   
Sbjct: 113 IIRSGIQALPAGQMEAGRSLGLSHMQAMRKIVLPQALYNTIPSMLSQFISTVKETSLGFV 172

Query: 344 VGFADL 349
           +   +L
Sbjct: 173 ISVHEL 178


>gi|317403731|gb|EFV84216.1| amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 229

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 57/84 (67%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +++LS YT+ ++AEIV   + AVPRGQ E A+ LGL   +  RLV+LPQAMR I+ P++ 
Sbjct: 96  FVSLSVYTSCYVAEIVSGAIRAVPRGQTEGAMTLGLRPLQILRLVILPQAMRLIVQPMSG 155

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
            Y+ L+K++++   VG  +L   G
Sbjct: 156 VYVMLIKSTAILSVVGITELTRQG 179


>gi|330429986|gb|AEC21320.1| glutamate/aspartate transport system permease protein [Pusillimonas
           sp. T7-7]
          Length = 229

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 5/178 (2%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST---VSPEFMSLYIALSCY 276
           PL +++   +  L  L LI + +  +F  P +G   ++ GS+       F S  +  + +
Sbjct: 52  PLSWVAGTYVNLLRALPLILVIFWFYFLVPYIG--AWLTGSSRPVAVGGFTSALVTFTLF 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+  EI+R+G+ +VPRGQ  A  ALGLT+ +    V+LPQA R++ P L +Q + L +
Sbjct: 110 EAAYFCEIMRAGIQSVPRGQHSAGYALGLTYWQVMGKVVLPQAFRNMTPILLTQTIVLFQ 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL   +   D +     +  + G+ IE+ +    IY  +S   +L +  L  + ++
Sbjct: 170 DTSLVYVLSLTDFLGAAVKVAQRDGRLIEMYMFVALIYFIMSYAASLLVRYLRQRTSI 227


>gi|312961372|ref|ZP_07775877.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311285030|gb|EFQ63606.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 220

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 74/129 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+ +  + ++EIVR  L A+PRGQ+EA  A+GLT  ++   VLLPQA+R I+P
Sbjct: 91  FQAGAVGLTLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLTFPQSLAYVLLPQALRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I LF 
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFMFFVINYAIELFG 210

Query: 386 NRLNAKIAL 394
             +  ++AL
Sbjct: 211 RYIEKRVAL 219


>gi|213967000|ref|ZP_03395150.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301385184|ref|ZP_07233602.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302062752|ref|ZP_07254293.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302130125|ref|ZP_07256115.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213928322|gb|EEB61867.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331014303|gb|EGH94359.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 220

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 72/129 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   +  R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
             +  ++AL
Sbjct: 211 RHIEKRVAL 219


>gi|113460357|ref|YP_718418.1| amino acid ABC transporter permease [Haemophilus somnus 129PT]
 gi|112822400|gb|ABI24489.1| amino acid ABC transporter membrane protein, PAAT family
           [Haemophilus somnus 129PT]
          Length = 238

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 13/204 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   V+ I ++L     S     +    +  +YIS  +I G P LV I++ +   +  P
Sbjct: 43  FILGMVIAIAVALIRVSPSHSIIHRLFLFITKIYIS--IIRGTPMLVQISIVF---YGLP 97

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG F       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +
Sbjct: 98  ALGIF-------IDP-IPAAIIGFSLNVGAYASETVRAAIQSVPKGQWEAGYTIGMTYMQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA R  +PPL++ +++L K++SLA  V   ++  V   + N +   + + + 
Sbjct: 150 TFRRIIVPQAFRVAVPPLSNTFISLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIE 209

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              IY     ++ L+  R+  K+A
Sbjct: 210 AALIYWCFCFILFLWQARIEKKLA 233


>gi|161521798|ref|YP_001585225.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189352040|ref|YP_001947667.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160345848|gb|ABX18933.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189336062|dbj|BAG45131.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 221

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 25/238 (10%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D S+V P+   L  +GL    LT+   A   +   +LG VLSL     SR          
Sbjct: 4   DFSVVWPYWWVLV-KGLG---LTLAYTATCAIVGSLLGFVLSLLRMSPSRWLRGPVAA-- 57

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              Y+  F   G P L+ +   + + F  PV+ +          P ++S+ I+L+ Y AA
Sbjct: 58  ---YVEFFR--GTPLLIQL---FWVFFCFPVVLRLPI-------PPYLSVLISLTLYMAA 102

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
             +E  R  L ++   Q +A IAL L+       V+ PQA+   IPPL S  ++L K S+
Sbjct: 103 ITSETFRGSLKSIAGEQHDACIALSLSPHVKIVYVIFPQALLRAIPPLLSNVVSLFKESA 162

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L  +VG ADL+ VG  + N T + +E    + +I+  +   L+ ++ +  +R+  + A
Sbjct: 163 LISSVGIADLMFVGQNVSNSTARPVEFLTTVAVIYFLVAFPLTRLVGVVESRMLRRYA 220


>gi|300741912|ref|ZP_07071933.1| glutamate transport system permease protein GluD [Rothia
           dentocariosa M567]
 gi|300381097|gb|EFJ77659.1| glutamate transport system permease protein GluD [Rothia
           dentocariosa M567]
          Length = 311

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 74/115 (64%), Gaps = 2/115 (1%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L +F++I  S +   F+++ I L+ Y  + IAE++RSG+  +PRGQ EA +A+GLT  + 
Sbjct: 136 LSRFSWINPSQL--PFLAVVIGLTFYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPGQT 193

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            R +L+PQA  S++P + SQ++ +LK+++L   + + +L++    I +  G  ++
Sbjct: 194 LRTILMPQAFNSMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQ 248


>gi|302549232|ref|ZP_07301574.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
 gi|302466850|gb|EFL29943.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
          Length = 310

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 17/225 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV---- 236
           +T+   A   V  F+LG V++    RLSR     T     + +   ++   +P +V    
Sbjct: 74  VTLQLTAYATVLGFLLGTVIAFM--RLSRSPVLST-----VAWTYIWIFRSIPMIVQLVF 126

Query: 237 ---LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
              L AL  +L    P    F  +  +T+     +  I L+ + AA+ AEIVR G++AV 
Sbjct: 127 WFNLSALYEELGLGIPFGPVFVSVDSNTLIGTIGAAVIGLTLHQAAYAAEIVRGGVLAVD 186

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ+EAA ALG+   +  R ++LPQAMR+I+P   ++ + LLK +S+   +   +L    
Sbjct: 187 HGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGNEIIGLLKGTSVVYVMSIGELFYQV 246

Query: 354 GTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALK 395
             I  + G+ + ++L+   W  +  SL  +   ++ R  A+ A +
Sbjct: 247 QVIYGRNGRVVPLLLVATAWYVVLTSLLSVAQYYVERRYARGADR 291


>gi|261406922|ref|YP_003243163.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261283385|gb|ACX65356.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 261

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 7/215 (3%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+     I   S ++GIV+  F   L R +      A  ++YIS F   G P L+ + L 
Sbjct: 20  TLGVTMLIVAGSLLVGIVVG-FLVALPRLYRIPMLNAFSMVYISFFR--GTPILIQLFLF 76

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y   +  P + +   I  S  +P  + + +    +T AF++E++R+ + AV RGQ+EAA 
Sbjct: 77  Y---YGLPEMLKLVHIDLSR-APVMVFVILTYGLHTGAFMSEMIRASVTAVDRGQVEAAY 132

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+G+   +A   ++LPQA+   +P  ++  + LLK++SLA  +G  ++     T+ N T 
Sbjct: 133 AMGMKGHQAFLRIVLPQALAIAVPVFSNMVIALLKDTSLAFTLGLMEMTGKAQTLGNITQ 192

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             IE  L   FIYL +S  +   + R   ++   E
Sbjct: 193 HFIEAYLALAFIYLVISFTLEKLLLRAERRLMRHE 227


>gi|56961809|ref|YP_173531.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908043|dbj|BAD62570.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 212

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 85/156 (54%), Gaps = 7/156 (4%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+A  + +HF  P L    F       P +  +++ ++  + A+IAEIVR G+ ++ +GQ
Sbjct: 61  LLAQIFFIHFGIPGLLDLRF------DPLYTGIFV-IAINSGAYIAEIVRGGVQSIDKGQ 113

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           MEA  +LGLT  +  R ++ PQA++ +IPP  +Q++  LK++SL   +  ADL+    T 
Sbjct: 114 MEAGRSLGLTGSQTMRYIIWPQAIKVMIPPFGNQFIISLKDTSLLSTIAVADLMYQSRTY 173

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +    +  L+    YL+++I  +L +     ++
Sbjct: 174 TGLSASYFDTYLLVCLFYLAITIPASLLLRYTERRL 209


>gi|330466433|ref|YP_004404176.1| amino acid permease [Verrucosispora maris AB-18-032]
 gi|328809404|gb|AEB43576.1| amino acid permease [Verrucosispora maris AB-18-032]
          Length = 290

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 24/183 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+PLL +  F+ +GLP ++           +PV               F S+ I L+ Y
Sbjct: 113 RAVPLLLMIFFVFYGLPYVI----------KQPVTA-------------FWSVVIGLTLY 149

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             + +AE  R+G+ A+P GQ EAA A+G+   +  +L+L+PQA R+++P + SQ + LLK
Sbjct: 150 NGSVLAEAFRAGIRALPGGQSEAAYAIGMRKTQVMQLILIPQAARAMLPIIVSQLVVLLK 209

Query: 337 NSSLAVAVGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++L   V + +L+  G   +    G  I   ++   IY+ ++ M+  F   L  +   +
Sbjct: 210 DTALGYIVAYPELLQRGVNDLAANYGNIIPAAMVIAVIYIIINSMLTWFAGWLERRTGTR 269

Query: 396 EKK 398
             +
Sbjct: 270 RAR 272



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 22/146 (15%)

Query: 19  LYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           LYD      +V N  + +I  + L  +  W    +Y+  +++N   G  +L +       
Sbjct: 7   LYDHPGPRAKVRNTVLSVIFGVALLGLVYW----IYSKFDQANQWEG--WLWK------- 53

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
               P+    ++   IL G   T   A  GM+ +   G +   GRLS +K ++      V
Sbjct: 54  ----PFAEPKTWTQFILPGLWATLKAAGVGMLLSLAFGIIFAVGRLSEHKWISVPAGAVV 109

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIP 159
           E FR +P L++IFF++  +  V+  P
Sbjct: 110 EFFRAVPLLLMIFFVFYGLPYVIKQP 135


>gi|289768689|ref|ZP_06528067.1| glutamate permease [Streptomyces lividans TK24]
 gi|289698888|gb|EFD66317.1| glutamate permease [Streptomyces lividans TK24]
          Length = 305

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 23/221 (10%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   V +  LG VL +   RLS H   +    +P+  +  F    +P LVL+   
Sbjct: 81  TLKAAALSMVIALPLGAVLGI--ARLSDHAWVR----IPVAIVVEFF-RSIPVLVLM--- 130

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298
                   + G   F   + VS +   LY     L  Y A+ +AEIVR+G++A+P+GQ E
Sbjct: 131 --------IFGLALFAEYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQAE 182

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTII 357
            A+A+GL   ++ RL+LLPQA+ +++P + SQ + +LK+++L  AV  F +L++   T+ 
Sbjct: 183 GAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKDTALGGAVLTFPELLASANTMS 242

Query: 358 NQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G   I    +   IY++L+  +  F + L  ++   +K
Sbjct: 243 GYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRAKK 283



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E+   +  +  + +TSD  ++T I  G  NT   A   M+ A  +G ++G  RLS + 
Sbjct: 49  LDEKGQLDWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 108

Query: 124 LVAWICRVYVEVFRNIPPLVVIFF 147
            V     + VE FR+IP LV++ F
Sbjct: 109 WVRIPVAIVVEFFRSIPVLVLMIF 132


>gi|111019224|ref|YP_702196.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110818754|gb|ABG94038.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 285

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 107/201 (53%), Gaps = 16/201 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +  F LG+VL++  +RLS   H    + +  +YI  F    +P +V +   + + +    
Sbjct: 48  ILGFALGVVLAV--SRLS---HNPVLQVIAWVYIWAFR--SIPLIVQLLFWFNITYLYQT 100

Query: 251 L--------GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           L        G F F     +S  F +  I L+ + AA+ AEI+RSG+I+V  GQ+EAA +
Sbjct: 101 LSLGIPFGPGFFTFEVNGVIS-GFTAAVIGLALHQAAYSAEIIRSGIISVDHGQIEAAQS 159

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+  R+    ++LPQAMR I+P   ++ ++L K +S+   +  A+L      I  + G+
Sbjct: 160 LGIPRRRQFFKIVLPQAMRGILPNAANEVISLFKGTSIVSTMAIAELFYQVQVIFGRNGR 219

Query: 363 AIEIILIWMFIYLSLSIMIAL 383
            + ++++    Y+ L+ ++++
Sbjct: 220 VVPLLMVATIWYIILTTLLSI 240


>gi|25028000|ref|NP_738054.1| putative amino acid ABC transporter permease protein
           [Corynebacterium efficiens YS-314]
 gi|23493283|dbj|BAC18254.1| putative amino acid ABC transporter permease protein
           [Corynebacterium efficiens YS-314]
          Length = 240

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 54/77 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA++AEIVRSG+ AVP GQMEA+ ALG+      R  +LPQAMR IIPP  ++
Sbjct: 80  LGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMGWSLTMRRTVLPQAMRIIIPPTGNE 139

Query: 331 YLNLLKNSSLAVAVGFA 347
            +++LK +SL VAV ++
Sbjct: 140 LISMLKTTSLVVAVPYS 156


>gi|115360581|ref|YP_777718.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115285909|gb|ABI91384.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 248

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFIWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAALIYLGLNFIVVRLLGALEWRLS 224


>gi|260777098|ref|ZP_05885992.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260606764|gb|EEX33038.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 304

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 1/145 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q    G  ++    +S  + +   ++A++AEIVRSGL  + +GQ EAA ALGL+     R
Sbjct: 158 QSMLFGPKSLWENLLSGVLCVGILSSAYVAEIVRSGLAGIAKGQWEAADALGLSTWAKYR 217

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV+ PQ + +I P L  Q ++L+K++S+   +   ++  VG  + N +G   EI LI   
Sbjct: 218 LVIAPQVLAAITPALAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLIVGA 277

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
            YL   + ++    RL  + +LK +
Sbjct: 278 TYLIFCLTLSALFKRLE-RHSLKHQ 301



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 32/51 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           G ++T  L+  GM+ A  +GTL+G  R S+  +   +  VY+++ RNIPPL
Sbjct: 73  GVISTLRLSVWGMLLALTLGTLIGVARHSSIYVFRSLANVYIQLIRNIPPL 123


>gi|313673707|ref|YP_004051818.1| polar amino acid abc transporter, inner membrane subunit
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940463|gb|ADR19655.1| polar amino acid ABC transporter, inner membrane subunit
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 290

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 80/140 (57%), Gaps = 5/140 (3%)

Query: 263 SPE-----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           +PE     F+S  I L+ Y +A+IAEI+R G+  V +GQ++A IALGL   +    +++P
Sbjct: 151 TPEQIFIPFISAAIGLAFYESAYIAEIIRGGINGVEKGQIDAGIALGLNRVQVYLYIVIP 210

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+   +P L  Q+++++KN+++A  V   +L      I+  +   +EI +    IY+ +
Sbjct: 211 QAIEKTLPSLIGQFVSIIKNTAIASIVAIPELTFQAMEILASSRLILEIWITIFLIYMVM 270

Query: 378 SIMIALFMNRLNAKIALKEK 397
           ++ ++   +R   +I  K K
Sbjct: 271 NLFVSSVASRAELRIRRKYK 290


>gi|229131355|ref|ZP_04260255.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST196]
 gi|228652099|gb|EEL08036.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST196]
          Length = 230

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 75/128 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F+N L  
Sbjct: 149 FIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLDTYIIVGLYYLVLVLLFTYFVNLLEK 208

Query: 391 KIALKEKK 398
           ++  KE  
Sbjct: 209 RLQRKENN 216


>gi|148255316|ref|YP_001239901.1| putative amino acid ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146407489|gb|ABQ35995.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 506

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 57/81 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++ ++ A++AE++R GL A+PRGQ EAA ALGL+  K T  ++LPQA+R +IP + + 
Sbjct: 374 VGVALFSGAYMAEVIRGGLQAIPRGQAEAASALGLSWWKTTSFIVLPQALRHVIPGIVNS 433

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +++L K++SL   V   DL+ 
Sbjct: 434 FISLFKDTSLVSIVALFDLLG 454


>gi|302558021|ref|ZP_07310363.1| glutamate permease [Streptomyces griseoflavus Tu4000]
 gi|302475639|gb|EFL38732.1| glutamate permease [Streptomyces griseoflavus Tu4000]
          Length = 225

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 88/152 (57%), Gaps = 6/152 (3%)

Query: 251 LGQFNFIGGSTVSPEFMSLY------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           LG  +  G +  +P+  +L       + L+ YTAAF+ E +RSG+  VP GQ EAA ALG
Sbjct: 74  LGLADIFGVTMGAPDDFALQGFRLAVLGLAAYTAAFVCEALRSGINTVPVGQAEAARALG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +   L++LPQA RS+I PL +  + L KN+++A A+G A+   +   +I    Q +
Sbjct: 134 LNFTQVLSLIVLPQAFRSVIGPLANVLIALTKNTTVAAAIGVAEAALLMKEMIENEAQTL 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I  ++ F ++ L++   LF+  L+ ++A+K 
Sbjct: 194 LIGAVFAFGFVVLTLPTGLFLGWLSKRLAVKR 225



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 9/70 (12%)

Query: 83  SSYATAILVGFVNTFWLA-----FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           S Y    L+G    FW+      FSG + + + GTL+ A R+S   L+ W    YV + R
Sbjct: 6   SDYDDPTLLG---AFWMTVKLTVFSG-VGSLVWGTLLAAMRVSPVPLMRWFGTAYVNIVR 61

Query: 138 NIPPLVVIFF 147
           NIP  V+I F
Sbjct: 62  NIPLTVIIVF 71


>gi|257056749|ref|YP_003134581.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586621|gb|ACU97754.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 287

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 64/96 (66%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F  G  +   F S+ + L+ Y  A +AE+ R+G++++P+GQ EAA A+G+   +  RL
Sbjct: 119 FFFHYGLALGAPFYSVVLGLTLYNGAVLAEVFRAGILSLPKGQSEAAYAIGMRKSQVMRL 178

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           VLLPQA+R+++P + SQ + LLK+++L   + + +L
Sbjct: 179 VLLPQALRAMMPAIISQLVVLLKDTALGFLITYEEL 214


>gi|271967567|ref|YP_003341763.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270510742|gb|ACZ89020.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 214

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++ Y AA+IAE +RSG+ AV  GQ EAA ALGLT  ++ R V+LPQA+R++I PL + 
Sbjct: 89  VVIALYEAAYIAEALRSGVNAVSAGQGEAARALGLTFGQSLRHVILPQALRTVIQPLGNI 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L  N+SLA A+G  DL +    +     Q I I +     Y  ++        RL  
Sbjct: 149 FIALTMNTSLAAAIGVVDLTAAANRVNLMEAQPIPIFVGAGLAYALIAACAGFVTGRLER 208

Query: 391 KIAL 394
           ++ +
Sbjct: 209 RLVM 212


>gi|163791027|ref|ZP_02185448.1| putative ABC-type amino-acid transporter permease protein
           [Carnobacterium sp. AT7]
 gi|159873672|gb|EDP67755.1| putative ABC-type amino-acid transporter permease protein
           [Carnobacterium sp. AT7]
          Length = 219

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 61/103 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  YTAA +AEIVR GL A+P+GQ EAA + G +  +    ++LPQ  + IIP L SQ
Sbjct: 91  LALFLYTAAVVAEIVRGGLNAIPKGQFEAAHSQGFSFFQTLLYIILPQTFKKIIPSLLSQ 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
            +  +K++S    +G  +    G  I+ +  +  E+ LI+ F+
Sbjct: 151 VITTIKDTSFLAGLGIMEFTRSGQVILGKVTKTSEVFLIYGFL 193


>gi|260432482|ref|ZP_05786453.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416310|gb|EEX09569.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 432

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ ++AA+IAE++R GL A+PRGQ EAA +LGL + +A RL++LPQA++  IP
Sbjct: 297 FLRVVIMITMFSAAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMRLIILPQALKISIP 356

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + +  + L K+++L   +   DLV  + G I+  T
Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILAST 392


>gi|297627443|ref|YP_003689206.1| polar amino acid ABC transporter, inner membrane component
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923208|emb|CBL57802.1| polar amino acid ABC transporter, inner membrane component
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 326

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/67 (47%), Positives = 53/67 (79%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A++AEI R+G+++V  GQ EAA ALG++HRK  R ++LPQAMR I+PP  ++++ ++K+
Sbjct: 186 SAYMAEIARAGIVSVDDGQTEAAEALGMSHRKTMRRIVLPQAMRVIVPPTGNEFIAMIKD 245

Query: 338 SSLAVAV 344
           +SL  A+
Sbjct: 246 TSLLAAI 252


>gi|282864437|ref|ZP_06273493.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282560924|gb|EFB66470.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 288

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 120/224 (53%), Gaps = 22/224 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RGL    LT+   A +    F LG +L++   RLSR+      +++   YI  +L    P
Sbjct: 75  RGLG---LTLWLTALVMALGFALGTLLAM--GRLSRN---PVLRSVSWGYI--WLFRSTP 124

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTV---SPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LV +   + +    P       +G  TV    P  +++ I L+ + AA+ AE+VR G++
Sbjct: 125 ILVQLLFWFNIGALYP-----QILGVDTVHLLGPMAVAV-IGLTLHEAAYAAEVVRGGIL 178

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RGQ+EAA +LGL   +  R ++LPQAMR+I+PP  +  +  LK +S+   +   DL+
Sbjct: 179 SVERGQLEAAQSLGLGPWRRLRRIVLPQAMRAIVPPAGNMLIGTLKGTSIVSIIAVQDLL 238

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAK 391
                + ++T Q I ++L+    Y++++ ++++   ++ R  A+
Sbjct: 239 YSVQLVYHRTYQVIPLLLVATLWYVAVTSLLSVGQYYVERRYAR 282


>gi|255263812|ref|ZP_05343154.1| ABC-type amino acid transport system permease component
           [Thalassiobium sp. R2A62]
 gi|255106147|gb|EET48821.1| ABC-type amino acid transport system permease component
           [Thalassiobium sp. R2A62]
          Length = 248

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 31/226 (13%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++ T+ M   A   + S V+G++++L         R+    + +  +A+P+L +  ++ +
Sbjct: 47  AYNTILMSLTA--ILISVVVGLLVALPGLSDKRGWRIFNRTYVEVVRAVPILVLILWVYY 104

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLPTL  + L                         F +  +AL+   +AF AEI R+G+ 
Sbjct: 105 GLPTLTGLTLNV-----------------------FWAGVLALALSDSAFQAEIFRAGIQ 141

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EAA ++ L +R   R ++LPQA+R I+P L +Q + +LK SSL   +G  +L 
Sbjct: 142 SIGKGQYEAAQSISLNYRDTMRYIILPQAIRRILPALGNQLVYMLKMSSLVSVIGMQELT 201

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                ++    + +EI  I +  YL L ++++  +  L +++   E
Sbjct: 202 RKANELVVSEYRPLEIYTILVLEYLVLILIVSAGVRWLESRMTASE 247


>gi|116695745|ref|YP_841321.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530244|emb|CAJ96591.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 216

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 11/162 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+++ L Y   +   VLG         +SP   ++ +A+S Y +A++ EI R  + 
Sbjct: 62  GTPVLIVLFLSY---YGLSVLGL-------KLSPMVAAM-LAMSIYASAYLGEIWRGCIE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EA+ AL LT  +  R V+LPQA+R  +PP     + L+KN+S+   +G  +L 
Sbjct: 111 AVPQGQWEASEALALTRWQQLRYVVLPQAVRLALPPTVGFSVQLVKNTSITSIIGVIELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  I N T Q   + ++   IY +L   ++    R+  ++
Sbjct: 171 RAGQLINNATFQPFAVFVVVALIYFALCFPLSAAARRMERRL 212


>gi|326332071|ref|ZP_08198356.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
 gi|325950209|gb|EGD42264.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
          Length = 299

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 76/140 (54%), Gaps = 9/140 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-------FMSL 269
            AL   YI  F    L  L++I     L F  P +G     G S VS +       F++ 
Sbjct: 110 NALSWFYIWFFRSLPLVVLLIIIFNASLFF--PQIGINIPFGPSLVSYDVEGLLVPFVAA 167

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + LS   AAF AEI+R GL++V  GQ+EAA ALGL+  +  R V+LPQA+RSI+P   +
Sbjct: 168 VVGLSLNEAAFAAEIIRGGLLSVDHGQIEAANALGLSPWRRLRQVVLPQALRSIVPGYVN 227

Query: 330 QYLNLLKNSSLAVAVGFADL 349
           Q + L+K SSL   V   DL
Sbjct: 228 QLIGLVKASSLVYYVSLVDL 247


>gi|307306804|ref|ZP_07586545.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306902095|gb|EFN32693.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 290

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 84/148 (56%), Gaps = 4/148 (2%)

Query: 231 GLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           G P L+ + L + L    P LG    F F     ++P F++  + L     A+ +E+VRS
Sbjct: 116 GAPALLQLMLWFNLALIFPTLGIPGLFEFRTVDVMTP-FVAAVLGLGISQGAYTSEVVRS 174

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL++V  GQ EAA  +G+T     R ++LPQAMR ++PP+ ++ + ++K +SLA  + ++
Sbjct: 175 GLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYS 234

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +++     I     + +E++L+  F YL
Sbjct: 235 EILHNAQIIYFANTRVLELLLVASFWYL 262



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q    Y  D  +A AILVG  NT  +  + M    ++G ++   R+S N +++ I 
Sbjct: 48  FSVGQIEWSYVRDFLFAPAILVGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSSIA 107

Query: 130 RVYVEVFRNIPPLV 143
             Y+ VFR  P L+
Sbjct: 108 IGYIWVFRGAPALL 121


>gi|170718972|ref|YP_001783435.1| polar amino acid ABC transporter inner membrane subunit
           [Haemophilus somnus 2336]
 gi|168827101|gb|ACA32472.1| polar amino acid ABC transporter, inner membrane subunit
           [Haemophilus somnus 2336]
          Length = 243

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 13/204 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   V+ I ++L     S     +    +  +YIS  +I G P LV I++ +   +  P
Sbjct: 48  FILGMVIAIAVALIRVSPSHSIIHRLFLFITKIYIS--IIRGTPMLVQISIVF---YGLP 102

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG F       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +
Sbjct: 103 ALGIF-------IDP-IPAAIIGFSLNVGAYASETVRAAIQSVPKGQWEAGYTIGMTYMQ 154

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA R  +PPL++ +++L K++SLA  V   ++  V   + N +   + + + 
Sbjct: 155 TFRRIIVPQAFRVAVPPLSNTFISLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIE 214

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              IY     ++ L+  R+  K+A
Sbjct: 215 AALIYWCFCFILFLWQARIEKKLA 238


>gi|150377104|ref|YP_001313700.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150031651|gb|ABR63767.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 290

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 84/148 (56%), Gaps = 4/148 (2%)

Query: 231 GLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           G P L+ + L + L    P LG    F F     ++P F++  + L     A+ +E+VRS
Sbjct: 116 GAPALLQLMLWFNLALIFPTLGIPGLFEFRTVDVMTP-FVAAVLGLGLSQGAYTSEVVRS 174

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL++V  GQ EAA  +G+T     R ++LPQAMR ++PP+ ++ + ++K +SLA  + ++
Sbjct: 175 GLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYS 234

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +++     I     + +E++L+  F YL
Sbjct: 235 EILHNAQIIYFANTRVLELLLVASFWYL 262



 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 37/74 (50%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q    Y  D  +A AIL G  NT  +  + M    ++G ++   R+S N +++ I 
Sbjct: 48  FSVGQIEWSYVRDFLFAPAILAGLYNTLLMTIAAMGVGIVLGVVIAIMRISGNPVLSSIA 107

Query: 130 RVYVEVFRNIPPLV 143
             YV VFR  P L+
Sbjct: 108 IGYVWVFRGAPALL 121


>gi|325261529|ref|ZP_08128267.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. D5]
 gi|324032983|gb|EGB94260.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. D5]
          Length = 230

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 116/229 (50%), Gaps = 16/229 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           +G F+ +    +    +    ++  F+ ++GIV+  F   + R  ++KTGK   L +I  
Sbjct: 10  YGNFIEDNRWEYILDGLGVTLQVTFFAVIIGIVIG-FLIAIIRSTYDKTGKLKILNFICK 68

Query: 227 F---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               +I G P +V + + Y           F   G + +S   +++ +A    + A++AE
Sbjct: 69  IYLTVIRGTPVVVQLLIIY-----------FVIFGSADISKVLVAI-MAFGFNSGAYVAE 116

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG++++  GQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S++  
Sbjct: 117 IFRSGIMSIDNGQFEAGRSLGFNYVQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSGY 176

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   DL   G  I ++T  A   ++    IYL + ++    +N L  ++
Sbjct: 177 IALQDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVMIFTKLVNMLERRL 225


>gi|311107899|ref|YP_003980752.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 14 [Achromobacter
           xylosoxidans A8]
 gi|310762588|gb|ADP18037.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 14
           [Achromobacter xylosoxidans A8]
          Length = 229

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 57/84 (67%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +++LS YT+ ++AEIV   + AVPRGQ E A+ LGL   +  RLV+LPQAMR I+ P++ 
Sbjct: 96  FVSLSVYTSCYVAEIVMGAIQAVPRGQTEGAMTLGLRPFQILRLVILPQAMRLIVQPMSG 155

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
            Y+ L+K++++   VG  +L   G
Sbjct: 156 VYVMLIKSTAILSVVGITELTRQG 179


>gi|283785663|ref|YP_003365528.1| putative cystine ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
 gi|282949117|emb|CBG88724.1| putative cystine ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
          Length = 222

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   RLS          LPL +++ F I       LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RLS--------PLLPLRWLARFYISIFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   ++ I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDPVPAAM-IGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWVMATVLSSLQNYFENQLNRQERE 220



 Score = 36.2 bits (82), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   RLS    + W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRLSPLLPLRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + P+P   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPVPAAMI----GLSLNTAAYAAETL 107


>gi|160903091|ref|YP_001568672.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga
           mobilis SJ95]
 gi|160360735|gb|ABX32349.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga
           mobilis SJ95]
          Length = 213

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 109/204 (53%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F LG++L++  T  ++ F+  +       Y+   +I G P LV +   + L++  PV
Sbjct: 17  VIGFFLGVLLAVSKTYGNKLFYYIS-------YVFIEIIRGTPLLVQL---FILYYSLPV 66

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +SP   S+ +A S  +AA+ AE +R  + ++  GQM+AA+++G+   +A
Sbjct: 67  IG-------IRLSPILASI-MAFSLNSAAYQAEYLRGAIQSISSGQMQAALSIGMKKWQA 118

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL++LPQA+R  IP  T++++ LLK SSL+  VG  ++++    + ++  +  ++ L  
Sbjct: 119 IRLIILPQALRRFIPSWTNEFIYLLKYSSLSYIVGAPEIMAQAKFVASRNFEFFQVYLFA 178

Query: 371 MFIYLSLSIMIALFMNRLNAKIAL 394
             IY  L  +       +  KI +
Sbjct: 179 AIIYFVLVTIFGEIFRFIEKKIKI 202


>gi|116333810|ref|YP_795337.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus brevis ATCC 367]
 gi|116099157|gb|ABJ64306.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus brevis ATCC 367]
          Length = 492

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 19/197 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           F F+LG++L+L   R+ +    +TG + L   Y+    I G P +V +   Y        
Sbjct: 304 FGFILGVLLAL--ARMGQGGVFRTGLRWLATAYVE--FIRGTPMMVQVMFVY-------- 351

Query: 251 LGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                F  G  V+ P   S  IA+S  + A++AE +R G+ +V  GQ EAA +LG++   
Sbjct: 352 -----FGLGLIVNLPALTSGIIAISLNSGAYVAEYIRGGINSVDAGQTEAARSLGMSSGA 406

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA+++I P L ++++ L+K+SS+   +G ++L+     + + T + +  I +
Sbjct: 407 TMRYVILPQALKNIWPSLGNEFITLIKDSSIVSIIGVSELIFQSNIVRSDTYRGVAPIAV 466

Query: 370 WMFIYLSLSIMIALFMN 386
            M +Y  L+   +  +N
Sbjct: 467 IMVLYFILTFTASRILN 483


>gi|77459312|ref|YP_348819.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77383315|gb|ABA74828.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 220

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 73/129 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+ +  + +AEIVR  L A+PRGQMEA  A+GLT  ++   VLLPQA+R I+P
Sbjct: 91  FQAGALGLTLFCGSHVAEIVRGALQALPRGQMEAGKAIGLTFYQSLGYVLLPQALRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     II +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQIIARTFMTLEFYLFAGFLFFVINYGIELLG 210

Query: 386 NRLNAKIAL 394
             +  ++AL
Sbjct: 211 RHIEKRVAL 219


>gi|57167933|ref|ZP_00367073.1| amino acid ABC tansporter, permease protein [Campylobacter coli
           RM2228]
 gi|305432041|ref|ZP_07401208.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Campylobacter coli JV20]
 gi|57021055|gb|EAL57719.1| amino acid ABC tansporter, permease protein [Campylobacter coli
           RM2228]
 gi|304445125|gb|EFM37771.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Campylobacter coli JV20]
          Length = 247

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 68/93 (73%), Gaps = 5/93 (5%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA ++I+P L +++
Sbjct: 124 ALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQATKNILPALANEF 183

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++L K +S+   VGF  ++ +  T+ +Q+ QA+
Sbjct: 184 ISLFKETSV---VGFISVIDI--TMQSQSLQAV 211


>gi|163759018|ref|ZP_02166104.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Hoeflea phototrophica DFL-43]
 gi|162283422|gb|EDQ33707.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Hoeflea phototrophica DFL-43]
          Length = 235

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 4/143 (2%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V+P +++  IAL  Y +A++A++ R  + ++P GQ E A ALGL+  K  RLV+LPQ
Sbjct: 88  GVNVNP-WLAASIALVVYASAYLADVWRGAVESIPAGQWEGARALGLSFLKIVRLVILPQ 146

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYL 375
           A+R  + P     + ++K +SLA  +GF DL+S+G    N      E  +I+     IY 
Sbjct: 147 AVRISLAPTVGFTVQIIKGTSLAYIIGFYDLMSIGKRWANAPVSGTEPYVIFPLMALIYF 206

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            L   ++++  RL  ++     K
Sbjct: 207 CLCFPLSVWARRLERRLGAVSSK 229


>gi|330965315|gb|EGH65575.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 220

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVILRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|294851193|ref|ZP_06791866.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|294819782|gb|EFG36781.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 240

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 90/168 (53%), Gaps = 8/168 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL +IS+  +     +  I + Y   +  P +G           PE +   IAL+ + ++
Sbjct: 50  PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S
Sbjct: 102 YFAEIIRGAILAVPQGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +   +  A+L   G  I  +T    EI L    IY  ++ + A  M+R
Sbjct: 162 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209


>gi|323525256|ref|YP_004227409.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382258|gb|ADX54349.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 225

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 10/213 (4%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+   A   +F    G VL++F+  LS H   +  +     Y+S F    +P LV++ L
Sbjct: 22  ITLQITAVAILFGLAWGTVLAIFS--LSTH---RALRIFTQAYVSLFR--SIP-LVMLLL 73

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + L   + +   FN    ST+    +S   A S   AAF  EI+R+G+ ++PRGQ++A 
Sbjct: 74  WFFLIVPQLLKALFNL--PSTIDLRLISALTAYSLLEAAFFCEIIRAGIASLPRGQLQAG 131

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+T  +  R V+LPQA R+++P   +Q + + +++SL   +   D       I  + 
Sbjct: 132 HALGMTSGQTLRYVILPQAFRAMVPLALTQCIVIFQDTSLVYVIALGDFFRRVTAIGERD 191

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  + ++++    Y +++ M+    N +  + A
Sbjct: 192 GNIVPMLIVAGVAYWAITTMLIAITNGVRMRFA 224


>gi|167745542|ref|ZP_02417669.1| hypothetical protein ANACAC_00233 [Anaerostipes caccae DSM 14662]
 gi|167655263|gb|EDR99392.1| hypothetical protein ANACAC_00233 [Anaerostipes caccae DSM 14662]
          Length = 227

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 18/179 (10%)

Query: 177 SFPT---LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           SF T   LT+       + + ++GI+  +F+         K    +  +Y+   +I G P
Sbjct: 13  SFSTALGLTLQLALASLICASIIGIIFGMFSVS-----KNKILNIICKIYVD--IIRGTP 65

Query: 234 TLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +V + + Y      F +P+   ++  GG      F++  +ALS    A++AEIVR G+ 
Sbjct: 66  LVVQVFIMYYGVAGAFLQPMDLNWDDFGG-----PFVAAVVALSLNAGAYMAEIVRGGIE 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +V +GQMEAA +LGL + KA   V+LPQA+R+++P + +Q++  +K++SL  A+G  +L
Sbjct: 121 SVDKGQMEAARSLGLPYGKAMSKVILPQAIRTMLPSIINQFIISIKDTSLVYAIGIREL 179



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           T  LA + +I A+IIG + G   +S NK++  IC++YV++ R  P +V +F +Y  V
Sbjct: 21  TLQLALASLICASIIGIIFGMFSVSKNKILNIICKIYVDIIRGTPLVVQVFIMYYGV 77


>gi|148558506|ref|YP_001257650.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148369791|gb|ABQ62663.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
          Length = 226

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 14/201 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+ LSL  T L R F      ++   Y+  F   G P LV +   + + +  P 
Sbjct: 28  LLSFTFGLALSLL-TALVRLFAPVWLSSVARFYVWIFR--GTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G +           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A
Sbjct: 82  IGIYL--------DAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
               +LPQA R+ +PPL++ +++L+K++SLA A+   +L      I+  T + + + +  
Sbjct: 134 LIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEA 193

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
             IYL+LS +++    RL  +
Sbjct: 194 ALIYLALSSILSALQVRLERR 214


>gi|119025595|ref|YP_909440.1| glutamine ABC transporter (binding and transport protein)
           [Bifidobacterium adolescentis ATCC 15703]
 gi|118765179|dbj|BAF39358.1| similar to glutamine ABC transporter (binding and transport
           protein) [Bifidobacterium adolescentis ATCC 15703]
          Length = 501

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 25/165 (15%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F  + VLG+   L     S     K    L  +YI+ F   G P LV     +  +F  P
Sbjct: 314 FAIALVLGVAFGLMKVSES-----KIAAGLANVYIAVFR--GTPILVW---AFFFYFGVP 363

Query: 250 VLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            L     IG S      +++++A    LS  + A++AEIVR  + +V  GQME A +LGL
Sbjct: 364 QL-----IGHS------VNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGL 412

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            HR+A R V+LPQA +  +P + +Q + ++K+SSL +A+GF +L+
Sbjct: 413 NHRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELL 457



 Score = 40.0 bits (92), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +       A ++G   G  ++S +K+ A +  VY+ VFR  P LV  FF
Sbjct: 298 ALLTGLRNTLLITLLSFAIALVLGVAFGLMKVSESKIAAGLANVYIAVFRGTPILVWAFF 357

Query: 148 LY 149
            Y
Sbjct: 358 FY 359


>gi|225575188|ref|ZP_03783798.1| hypothetical protein RUMHYD_03277 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037596|gb|EEG47842.1| hypothetical protein RUMHYD_03277 [Blautia hydrogenotrophica DSM
           10507]
          Length = 229

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 116/227 (51%), Gaps = 20/227 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-- 227
           F+ +    + T  +    ++   + ++GI+L LF   + R  ++KT K   L +I     
Sbjct: 12  FVTDDRWKYITDGLKVTLEVTFLAVLIGILLGLFVA-IVRSTYDKTHKLKILNFICNIYI 70

Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V + + Y           F       VS  F+++ +A    + A++AEI R
Sbjct: 71  TVIRGTPVVVQLLIIY-----------FVVFASMDVSKVFVAV-MAFGMNSGAYVAEIFR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++++ +GQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S+A  +  
Sbjct: 119 SGIMSIDQGQFEAGRSLGFNYAQTMVHIIMPQAFKNVLPALGNEFIVLLKETSVAGYIAL 178

Query: 347 ADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMNRLN 389
            DL   G  I ++T  A    I + LI++ + +  + ++AL   RL 
Sbjct: 179 QDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVMIFTKLVALLERRLR 225


>gi|218661449|ref|ZP_03517379.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli IE4771]
          Length = 222

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ Y  A  +E  R+ L ++ R Q++A +ALGL  R     V+LPQA+   +P L S 
Sbjct: 95  IALTLYMGAITSETFRASLKSIGREQLDACVALGLPQRVRVVNVVLPQAVLRAVPTLLSN 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMN 386
            ++L K S+L  AVG ADL+ VG  I N T + +E++    LI+  I   L+  ++L   
Sbjct: 155 CVSLFKESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLVEG 214

Query: 387 RLNAKIAL 394
           R+  K+A+
Sbjct: 215 RILKKLAI 222


>gi|323697764|ref|ZP_08109676.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457696|gb|EGB13561.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 294

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 74/125 (59%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F G     P F+S  I L+ + AA+IAEIVR+G+ +V  GQ EAA   GLT  ++   V+
Sbjct: 156 FFGPMNRFPRFLSALITLALFEAAYIAEIVRAGIESVEPGQWEAAAGTGLTRTQSLVHVI 215

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA++ ++P L  Q+++++K+S++   +   +L      ++  T ++ EI  + + +Y 
Sbjct: 216 LPQALQRMLPALAGQFISIIKDSAIVSVISIEELTFQAQQLMTTTYRSFEIWTLVLVMYF 275

Query: 376 SLSIM 380
            L+ +
Sbjct: 276 VLTFL 280



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

Query: 83  SSYATAILV-GFVNTFWLA-FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            S+A  +L  G   T  L+ +SG++ A ++G +VG  R+S +     +  VYV + RN P
Sbjct: 58  GSWAPGLLTQGLFTTIRLSVWSGLL-AMVLGVVVGLFRVSPSLFKRQVGAVYVGLIRNTP 116

Query: 141 PLVVIFFLY 149
           PLV+IF  Y
Sbjct: 117 PLVLIFVFY 125


>gi|307693268|ref|ZP_07635505.1| polar amino acid ABC transporter, inner membrane subunit
           [Ruminococcaceae bacterium D16]
          Length = 245

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 75/113 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   +AL+  ++A++AEI R+G++AV  GQ EAA +LGL+  ++ RLV+LPQA+++++P
Sbjct: 113 FIPSVVALALNSSAYVAEIFRAGILAVDAGQTEAARSLGLSSWQSMRLVVLPQAVKNVLP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            L ++ + ++K SS+   +G  DL+    T+I  +  A+  +++   IY  ++
Sbjct: 173 ALANEVVTMVKESSICSVIGVYDLMWGAKTVITNSYIAVGPLVLAAIIYFCIN 225



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+   ++ A I   L+   RLS +++V WI   Y+ +FR+ P LV ++ +Y  
Sbjct: 33  GVKYTLMLSVVAVLLAVIPALLLALMRLSKSRIVRWISGAYIAIFRSTPMLVQLYIIYLG 92

Query: 152 VLSVLPIPDHSI 163
           V S + +P  +I
Sbjct: 93  VFSFIEVPKMTI 104


>gi|28869963|ref|NP_792582.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853208|gb|AAO56277.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 220

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 72/129 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+PRGQ+EA  A+GL   +  R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
             +  ++AL
Sbjct: 211 RHIEKRVAL 219


>gi|72161211|ref|YP_288868.1| amino acid ABC transporter permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thermobifida fusca YX]
 gi|71914943|gb|AAZ54845.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thermobifida fusca YX]
          Length = 327

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 79/127 (62%), Gaps = 3/127 (2%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           ++ I L+ Y  + +AE+ R+G+ AVP+GQ EAA +LG+   +    +L+PQA+RS++P +
Sbjct: 174 AVVIGLTLYNGSVLAEVFRAGINAVPKGQSEAAYSLGMNKVQVMWWILIPQAVRSMMPAI 233

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI---MIALF 384
            +Q + LLK+++L   + F +L+     I  + G  I   LI   IY++++I    +A++
Sbjct: 234 VAQLVILLKDTALGYIIAFPELLRSFSLIGTRYGNVIPAALICAVIYIAINISLSRLAIW 293

Query: 385 MNRLNAK 391
           + + NA+
Sbjct: 294 LEKRNAR 300


>gi|297579917|ref|ZP_06941844.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297535563|gb|EFH74397.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 298

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 76/134 (56%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P GQ EAA +LGL++    R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPPGQWEAADSLGLSNWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLTLSMLFKQVEKR 291



 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 8/57 (14%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV----YVEVFRNIPPL 142
           L G V T  L+  GM+ A ++G+L+G  R  ++K  AW  R+    +V++ RNIPPL
Sbjct: 66  LQGLVATLRLSLWGMVLALVLGSLIGIAR--SHK--AWFVRLPANAFVQLVRNIPPL 118


>gi|331003246|ref|ZP_08326753.1| hypothetical protein HMPREF0491_01615 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412899|gb|EGG92279.1| hypothetical protein HMPREF0491_01615 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 230

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 29/201 (14%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKY-----Q 243
           F+ +LG VL  F+  + R+ ++ T +   L +I      +I G P +V + + Y      
Sbjct: 35  FAVILGFVLG-FSVAVVRNIYDNTKRLKFLNFICNIYLTVIRGTPVVVQLLIIYFVIFSS 93

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  DK V                 +  +A    + A+ AEI RSG+ +VP+GQMEA  +L
Sbjct: 94  MRVDKSV-----------------AAILAFGINSGAYQAEIFRSGINSVPKGQMEAGRSL 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G  + +    +++PQA+++I+P L ++++ L+K +S+A  +   DL   G  I ++T  A
Sbjct: 137 GFNYAQTMIFIIMPQAIKNILPTLANEFIVLMKETSVAGYIALEDLTKAGDVIRSRTYSA 196

Query: 364 IEIILIWMFIYLSLSIMIALF 384
           +   L    +YL   IM+ LF
Sbjct: 197 MMPFLAVALLYL---IMVMLF 214


>gi|302526883|ref|ZP_07279225.1| predicted protein [Streptomyces sp. AA4]
 gi|302435778|gb|EFL07594.1| predicted protein [Streptomyces sp. AA4]
          Length = 495

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 78/131 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  ++L  Y+ +++ EI R  + ++ RGQ+EAA + G++   A R V++PQA   +
Sbjct: 363 PPMTAGIVSLGLYSGSYVTEIFRGAVQSIDRGQLEAARSCGMSQVSAMRHVIIPQAFLRM 422

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +++++L KNS+L   V   +L  VG TII++T  A+ + L    +Y  L+ +I+ 
Sbjct: 423 LPPLGNEFVSLTKNSALVSFVTIHELFLVGQTIISRTFDALTVYLFIGLLYYLLTNLISG 482

Query: 384 FMNRLNAKIAL 394
               L  K+A+
Sbjct: 483 TTRTLEKKMAV 493


>gi|237731964|ref|ZP_04562445.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
 gi|226907503|gb|EEH93421.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
          Length = 222

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG +L+L   RLS          LP+ +++ F I       LIA  + +++  P  
Sbjct: 32  FGLVLGFILALM--RLS--------PLLPVRWLARFYISIFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ AE +R+ + ++ +GQ EA  ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYAAETLRAAISSIDKGQWEAGASIGMTRWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWVMATVLSALQNYFEEQLNRQERE 220



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFILALMRLSPLLPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYAAETL 107


>gi|330875048|gb|EGH09197.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 220

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|239982701|ref|ZP_04705225.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 212

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 257 IGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           +GG  V    F    + LS YTAAF+ E VRSG+  VP GQ EAA ALGL   +   L++
Sbjct: 72  LGGEGVKEVAFRMAVLGLSTYTAAFVCESVRSGINTVPVGQAEAARALGLNFTQVLTLIV 131

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           LPQA R++I PL +  + L KN+++A A+G  +
Sbjct: 132 LPQAFRTVIGPLANVLIALTKNTTVAAAIGVGE 164


>gi|221196254|ref|ZP_03569301.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221202927|ref|ZP_03575946.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221176861|gb|EEE09289.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221182808|gb|EEE15208.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 500

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 12/180 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L  F   L+R  H+   K     YI  F    LP LVL+   Y L    P +    F
Sbjct: 35  GVLLG-FPVALARQSHQPALKRAAAAYIWFFR--SLPLLVLLVFIYNL----PQV----F 83

Query: 257 IGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              STV S  F +  IA+     A+ AEI R G+++VPRGQ+EA  ALG+      R+++
Sbjct: 84  PATSTVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIV 143

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQA+R  +P L ++++ ++K +SL   +  A+++ VG  +  Q     E +L   F Y+
Sbjct: 144 MPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYV 203


>gi|212704997|ref|ZP_03313125.1| hypothetical protein DESPIG_03065 [Desulfovibrio piger ATCC 29098]
 gi|212671549|gb|EEB32032.1| hypothetical protein DESPIG_03065 [Desulfovibrio piger ATCC 29098]
          Length = 266

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 6/127 (4%)

Query: 268 SLYIALS-CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           S  IALS CY  A++ E+ R+G++A+P GQ EAA +LG    +    V+LPQA R+IIPP
Sbjct: 135 SAVIALSFCY-GAYMGEVFRAGILAIPHGQTEAARSLGFNRVQTMFYVVLPQAWRTIIPP 193

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIA 382
           + ++ + +LK+++L   +G  DL+    +  +++    E    + L+++ I L LS +++
Sbjct: 194 VGNECIAMLKDTALVSVIGMPDLMQRARSFASKSYCYFESYTVVALVYLIITLILSKIVS 253

Query: 383 LFMNRLN 389
           +   RLN
Sbjct: 254 IIEARLN 260



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 80  TSDSSYATAILV---GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           T    Y  AI+    G + TF +    +  A  +G L G GR+S N+    +   YVEV 
Sbjct: 49  TGPQVYRDAIIFLPDGLLLTFKVTAYSICGAVPLGLLTGLGRISRNRFFNLLASTYVEVI 108

Query: 137 RNIPPLVVIFFLY 149
           R IP LV IF++Y
Sbjct: 109 RGIPLLVQIFYIY 121


>gi|154487057|ref|ZP_02028464.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis
           L2-32]
 gi|154084920|gb|EDN83965.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis
           L2-32]
          Length = 516

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 25/165 (15%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F  + VLG+   L     S     K    L  +YI+ F   G P LV     +  +F  P
Sbjct: 329 FAIALVLGVAFGLMKVSES-----KIAAGLANVYIAVFR--GTPILVW---AFFFYFGVP 378

Query: 250 VLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            L     IG S      +++++A    LS  + A++AEIVR  + +V  GQME A +LGL
Sbjct: 379 QL-----IGHS------VNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGL 427

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            HR+A R V+LPQA +  +P + +Q + ++K+SSL +A+GF +L+
Sbjct: 428 NHRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELL 472



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +       A ++G   G  ++S +K+ A +  VY+ VFR  P LV  FF
Sbjct: 313 ALLTGLRNTLLITLLSFAIALVLGVAFGLMKVSESKIAAGLANVYIAVFRGTPILVWAFF 372

Query: 148 LY 149
            Y
Sbjct: 373 FY 374


>gi|149908406|ref|ZP_01897069.1| amino acid ABC transporter, permease protein [Moritella sp. PE36]
 gi|149808569|gb|EDM68504.1| amino acid ABC transporter, permease protein [Moritella sp. PE36]
          Length = 370

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 71/112 (63%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA+IAE++R GL A+P+GQ EA+ +LGLT+ +   L++LPQA++  IP L   
Sbjct: 242 IGITLFQAAYIAEVIRGGLQAIPKGQYEASESLGLTYWQGMILIILPQALKISIPNLVGS 301

Query: 331 YLNLLKNSSLAVAVGFAD---LVSVGGTIINQTGQAIE-----IILIWMFIY 374
           +++L K+++L + +G  D   +V++  +  N  G  IE      ++ W+F +
Sbjct: 302 FISLFKDTTLVLIIGLFDILAMVTLTNSDTNWLGFEIEGYVFVTMIYWVFCF 353


>gi|332161055|ref|YP_004297632.1| glutamine ABC transporter permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318604932|emb|CBY26430.1| glutamate transport membrane-spanning protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665285|gb|ADZ41929.1| glutamine ABC transporter permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860700|emb|CBX70993.1| glutamine transport system permease protein glnP [Yersinia
           enterocolitica W22703]
          Length = 218

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 89  FTAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  +
Sbjct: 149 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 208

Query: 386 NRLNAKIAL 394
            RL  K+ +
Sbjct: 209 RRLERKLKI 217


>gi|307320801|ref|ZP_07600211.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306893511|gb|EFN24287.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 290

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 84/148 (56%), Gaps = 4/148 (2%)

Query: 231 GLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           G P L+ + L + L    P LG    F F     ++P F++  + L     A+ +E+VRS
Sbjct: 116 GAPALLQLMLWFNLALIFPTLGIPGLFEFRTVDVMTP-FVAAVLGLGISQGAYTSEVVRS 174

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL++V  GQ EAA  +G+T     R ++LPQAMR ++PP+ ++ + ++K +SLA  + ++
Sbjct: 175 GLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMRVMVPPVGNEVIGMVKLTSLASVIQYS 234

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +++     I     + +E++L+  F YL
Sbjct: 235 EILHNAQIIYFANTRVLELLLVASFWYL 262



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q    Y  D  +A AILVG  NT  +  + M    ++G ++   R+S N +++ I 
Sbjct: 48  FSVGQIEWSYVRDFLFAPAILVGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSSIA 107

Query: 130 RVYVEVFRNIPPLV 143
             Y+ VFR  P L+
Sbjct: 108 IGYIWVFRGAPALL 121


>gi|251797221|ref|YP_003011952.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247544847|gb|ACT01866.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 223

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 74/127 (58%), Gaps = 6/127 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ ++++P+GQ EAA +LG T  +A R ++LPQA R  +P
Sbjct: 91  FPAAVIGFTLSVGAYGSEIIRAAIVSIPKGQWEAAFSLGETRLQALRRIILPQAARVTVP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSLSIMIA 382
           PL++ +++L+K++SLA  V   +L   G  I   T    E +LI+     IYL    ++A
Sbjct: 151 PLSNSFISLVKDTSLAATVTVTELFQKGQQI---TAAVYEPLLIYCEVALIYLIFCSILA 207

Query: 383 LFMNRLN 389
           L   +L 
Sbjct: 208 LLQRQLE 214


>gi|116492831|ref|YP_804566.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus pentosaceus ATCC 25745]
 gi|116102981|gb|ABJ68124.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 483

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 33/194 (17%)

Query: 187 AKIF-VFSFVLGIVLSLFATRLSRH----FHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           A IF +F  +LG+V + FA  +S      F     + LPLL ++ F+  G+P LV     
Sbjct: 299 ATIFGIFFGMLGVVPNKFANGVSTTVIYIF-----RGLPLLVLALFIYTGVPNLV----- 348

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                            G  + P F++  I L+    A+ A  V+ G+ AV  GQMEAA 
Sbjct: 349 -----------------GEKI-PAFVAGIITLTLNEGAYTAAFVKGGIEAVDGGQMEAAR 390

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL + KA R V+LPQ ++ ++P   +Q++  LK++S+   +G  +L   G  II +  
Sbjct: 391 SLGLPYGKAMRRVILPQGLKIMVPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNL 450

Query: 362 QAIEIILIWMFIYL 375
           +  +I  +   IYL
Sbjct: 451 EGFKIWTMVALIYL 464


>gi|317492207|ref|ZP_07950636.1| His/Glu/Gln/Arg/opine family amino ABC transporter
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919546|gb|EFV40876.1| His/Glu/Gln/Arg/opine family amino ABC transporter
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 231

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 14/199 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+ GI++  F T L+R +  K  K +   Y+  ++I G P LV + L +        
Sbjct: 40  ILSFIGGIIVG-FITALARLYAPKPVKWIFDFYV--WVIRGTPLLVQLFLIF-------- 88

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              +           F +  I  +    A+ +EI+R  +I+VP+GQ EA+ ++G++  +A
Sbjct: 89  ---YGLPSAGITLDAFPAALIGFTLSVGAYTSEIIRGAIISVPKGQWEASYSIGMSSSQA 145

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQ++   +PPL++ +++L+K++SLA  +   ++      I++ T + + + +  
Sbjct: 146 MRRVILPQSVFVSLPPLSNSFISLIKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYVEA 205

Query: 371 MFIYLSLSIMIALFMNRLN 389
             IYL  S ++    NRL 
Sbjct: 206 ALIYLMFSTVLGKLQNRLE 224


>gi|157691133|ref|YP_001485595.1| L-cystine ABC transporter membrane protein [Bacillus pumilus
           SAFR-032]
 gi|157679891|gb|ABV61035.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Bacillus pumilus SAFR-032]
          Length = 230

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 6/135 (4%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+ P + S  IA S    A+ +EI+R+ +++VP+GQ EA  ++G+THRK    V+LPQA+
Sbjct: 93  TLDP-YPSAIIAFSLNVGAYASEIIRASVLSVPKGQWEAGYSIGMTHRKTLVRVILPQAV 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSL 377
           R  IPPL++ +++L+K++SLA  +  A++      I        +I+ I+M    IY   
Sbjct: 152 RVSIPPLSNSFISLVKDTSLASQILVAEMFRKSQEI--AAANLDQILFIYMEAALIYWVF 209

Query: 378 SIMIALFMNRLNAKI 392
             +++L  +++  ++
Sbjct: 210 CFILSLVQHQIEKRL 224


>gi|260886618|ref|ZP_05897881.1| L-cystine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|330839549|ref|YP_004414129.1| polar amino acid ABC transporter, inner membrane subunit
           [Selenomonas sputigena ATCC 35185]
 gi|260863761|gb|EEX78261.1| L-cystine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|329747313|gb|AEC00670.1| polar amino acid ABC transporter, inner membrane subunit
           [Selenomonas sputigena ATCC 35185]
          Length = 214

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 78/127 (61%), Gaps = 1/127 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+  +  +A +   AA+ AEI R+G+ ++ RGQ EAA +LG+T+ +  R +++PQ +R +
Sbjct: 82  PDIAAALLAFTLNYAAYFAEIFRAGIQSIGRGQYEAAKSLGMTYTQTMRRIIVPQMIRHV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ +NL+K++SL   +   DL+ V  TI+ +        +  +F YL+++ ++  
Sbjct: 142 LPPVSNETINLVKDTSLIYILAMNDLLRVARTIVQREFDMTPFFVAAVF-YLAMTFVLTW 200

Query: 384 FMNRLNA 390
              +L A
Sbjct: 201 GFKKLEA 207


>gi|126659707|ref|ZP_01730836.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Cyanothece sp. CCY0110]
 gi|126619052|gb|EAZ89792.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Cyanothece sp. CCY0110]
          Length = 391

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 58/84 (69%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + ++AA++AE VR GL +VP+GQ EAA ALGL       LV+LPQA+R +IP +  Q+++
Sbjct: 271 TLFSAAYLAENVRGGLQSVPQGQTEAAKALGLNTFFVLILVVLPQALRVVIPTIVGQFIS 330

Query: 334 LLKNSSLAVAVGFADLVSVGGTII 357
           L K++SL   VG  DL+ +  +I+
Sbjct: 331 LFKDTSLLAIVGLVDLLGISQSIL 354


>gi|302186219|ref|ZP_07262892.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|330941852|gb|EGH44589.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330953423|gb|EGH53683.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
 gi|330981318|gb|EGH79421.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 220

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|163800522|ref|ZP_02194423.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175965|gb|EDP60759.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 306

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%)

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           +P   Q  F G + +     S    +   +AA++AE+VR+GL  + +GQ EAA +LGL+ 
Sbjct: 157 EPNAIQHFFFGPANLWENLASGVFCIGLLSAAYVAEVVRAGLQGIDKGQWEAADSLGLSL 216

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R ++ PQ +++I P L  Q ++L+K++S+   +   ++  VG  + N +G   EI 
Sbjct: 217 WVKYRFIIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTFVGTEMANSSGYIFEIW 276

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           LI  F+Y  +   +++    +  K A
Sbjct: 277 LIVGFVYFLICFGLSMVFRYIEKKSA 302



 Score = 36.6 bits (83), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           G ++T  L+  G+  A ++GTL+G  R S +K +      ++++ RNIPPL
Sbjct: 77  GLISTLRLSVWGITFALVLGTLLGLARFSDSKWLRTPANAFIQLVRNIPPL 127


>gi|330837352|ref|YP_004411993.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329749255|gb|AEC02611.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 221

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 55/80 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ YT AF   +V + + AVP+GQ EAA++ G +H ++  +V++PQAMR  +PP+ +Q
Sbjct: 95  IGLALYTGAFGGAVVEAAIRAVPKGQTEAALSQGFSHLQSMVMVIIPQAMRIALPPMANQ 154

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            +NL+KNSS+   V   DL+
Sbjct: 155 LVNLIKNSSIMAMVAGGDLM 174


>gi|326574956|gb|EGE24886.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 101P30B1]
          Length = 241

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 13/186 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLYI 271
           +A+P  YI  F   G P LV I L Y        LGQF     +F+     S  +    I
Sbjct: 52  RAIPATYI--FFFRGTPLLVQIFLIYY------GLGQFTALKESFLWDPIFSQAYWCAII 103

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +  T+A+I EIVR  ++AVP G++EAA A+G++ R+    V+LP+A   ++P  +++ 
Sbjct: 104 AFTLNTSAYIGEIVRGAVMAVPTGELEAADAIGMSKRQKLHRVILPRAFGIMLPAYSNEV 163

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK S+LA ++   +L      II+ T   +E+      IYL +S +      +   +
Sbjct: 164 IFMLKGSALAASITVVELTHKARDIISITYLHLEMFFAAGMIYLVISWVFLFIFRQFEHR 223

Query: 392 IALKEK 397
           +   ++
Sbjct: 224 VNRHKR 229


>gi|262202137|ref|YP_003273345.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           bronchialis DSM 43247]
 gi|262085484|gb|ACY21452.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia
           bronchialis DSM 43247]
          Length = 296

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 33/195 (16%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSRH--------FHEKT 215
           PF  +    G  FP L     A +   V + +LG VL +   RLS H        F  + 
Sbjct: 55  PFTKWSTWSGYIFPGLFRTLAAAVVSIVLALILGAVLGI--GRLSDHLWVRMIAGFFVEV 112

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +A+P+L +  F  F L  L  +    QL F   V G                    L+ 
Sbjct: 113 FRAIPVLILMVFTWF-LFALYGVVPASQLAFAAVVTG--------------------LTL 151

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y  + +AEI+RSG+ ++P+GQ EA+ ALGL      RL+LLPQA+ +++P L SQ +  L
Sbjct: 152 YNGSVMAEILRSGINSLPKGQTEASKALGLRKSHMMRLILLPQAVTAMMPALVSQMVVAL 211

Query: 336 KNSSLAVAVGFADLV 350
           K+S+L   +G+++++
Sbjct: 212 KDSALGYIIGYSEII 226



 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 41/72 (56%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+T  S+++  I  G   T   A   ++ A I+G ++G GRLS +  V  I   +VEVFR
Sbjct: 55  PFTKWSTWSGYIFPGLFRTLAAAVVSIVLALILGAVLGIGRLSDHLWVRMIAGFFVEVFR 114

Query: 138 NIPPLVVIFFLY 149
            IP L+++ F +
Sbjct: 115 AIPVLILMVFTW 126


>gi|218282661|ref|ZP_03488876.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989]
 gi|218216424|gb|EEC89962.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989]
          Length = 538

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 86/133 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +S+ IAL   ++A++AEI+RSG+ +V +GQ EAA +LG+++      +++PQA+++I
Sbjct: 406 PMIVSVIIALIINSSAYVAEIIRSGIQSVDKGQREAAKSLGMSNVHMMTKIIIPQAIKNI 465

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++++ ++K +SLA      +L++V   I + T ++IE ++I   IY  ++  ++ 
Sbjct: 466 LPALGNEFVMMIKETSLASTFYIGELMTVNSVIKSATYKSIEPLVIVGLIYFIVTYSLSK 525

Query: 384 FMNRLNAKIALKE 396
            +  +  K+++ +
Sbjct: 526 LIKYMEGKLSVSD 538


>gi|118473378|ref|YP_884593.1| polar amino acid ABC transporter inner membrane protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118174665|gb|ABK75561.1| ABC polar amino acid family protein transporter, inner membrane
           subunit [Mycobacterium smegmatis str. MC2 155]
          Length = 323

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 18/208 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-------ALKYQLH 245
             VLG VL++   RLS +      +AL   Y+  F   G P LV +       AL   L 
Sbjct: 98  GIVLGTVLAVM--RLSAN---PVAQALAFAYVGFF--RGTPVLVQLIFWFNFAALYPHLS 150

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P     +    + +SP    + + L  + AA++AEI+R G+ ++  GQ+EAA ALGL
Sbjct: 151 FGIP---GVDIDANALISPVLAGV-LGLGLHEAAYMAEIIRGGIGSIDVGQIEAARALGL 206

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  R ++LPQAMR I+PP  ++ + +LK SSL   +   +L+     I     Q I 
Sbjct: 207 RKNQVLRRIVLPQAMRVIVPPTGNEVVGMLKTSSLVSVLAVGELLYSAQLIYASNYQTIP 266

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++++    YL L+ +++    RL    A
Sbjct: 267 LLIVASLWYLVLTAVLSAGQMRLERHFA 294


>gi|306828881|ref|ZP_07462073.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304429059|gb|EFM32147.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 520

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 491


>gi|260583445|ref|ZP_05851193.1| glutamine ABC transporter glutamine-binding protein/permease
           [Granulicatella elegans ATCC 700633]
 gi|260158071|gb|EEW93139.1| glutamine ABC transporter glutamine-binding protein/permease
           [Granulicatella elegans ATCC 700633]
          Length = 479

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 23/175 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+ FG+P  + I L                   +TV+         L   
Sbjct: 327 RGIPLIVLTFFIYFGIPQALNIRLD------------------ATVAA-----ITTLGLN 363

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+IAEIVR G+ A+ +GQ EAA++LGL + K+ + ++LPQA+R ++P   +Q++  LK
Sbjct: 364 AAAYIAEIVRGGINAIDKGQSEAAMSLGLPYYKSMQKIILPQAIRLMVPSFINQFVITLK 423

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++S+   +G  +L   G  II +  Q+  +  I   +YL +  ++     RL  K
Sbjct: 424 DTSILSIIGLVELTQTGKIIIARNLQSSSMWFIVGMMYLIVITLLTKISARLERK 478



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A  +L G  NT W+ F  +  ATIIG L+G  R S   ++  I  +Y++  R IP +V+ 
Sbjct: 276 APTLLNGLWNTIWITFVSLAIATIIGVLLGLMRTSRISVLETIATIYIDFMRGIPLIVLT 335

Query: 146 FFLYKSVLSVLPI 158
           FF+Y  +   L I
Sbjct: 336 FFIYFGIPQALNI 348


>gi|241113592|ref|YP_002973427.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861800|gb|ACS59466.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 220

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 91/178 (51%), Gaps = 24/178 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +  F+ F LP       +  L  DK                   S  + LS Y
Sbjct: 65  RNLPILVLVLFVFFALP-------QMGLRLDK-----------------IKSFVLVLSLY 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AE+ R+GL+++PRG  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K
Sbjct: 101 SGAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SLA A+   +L      I  ++ + IE  ++   +Y++   +IA  M  +   +AL
Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVAACFLIAAVMRVVERSLAL 218


>gi|164688273|ref|ZP_02212301.1| hypothetical protein CLOBAR_01918 [Clostridium bartlettii DSM
           16795]
 gi|164602686|gb|EDQ96151.1| hypothetical protein CLOBAR_01918 [Clostridium bartlettii DSM
           16795]
          Length = 210

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 78/133 (58%), Gaps = 1/133 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  +A +   +A+IAEI RSG+ ++P GQ EAA  LG    +    ++LPQ ++ I
Sbjct: 79  PRFWAAILAFTLNYSAYIAEIYRSGIESIPVGQYEAATVLGFGKAETFFKIILPQVVKRI 138

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPP++++ + L+K+++LA  +G A++  + G  ++     + +I+  +F YL ++ ++  
Sbjct: 139 IPPMSNELMTLVKDTALAQVIGVAEIFKLAGATMSSQFSTVPLIVAGVF-YLIMNAVVER 197

Query: 384 FMNRLNAKIALKE 396
           F   L  K+   E
Sbjct: 198 FCFYLEKKLDYYE 210


>gi|157146551|ref|YP_001453871.1| glutamine ABC transporter permease protein [Citrobacter koseri ATCC
           BAA-895]
 gi|157083756|gb|ABV13434.1| hypothetical protein CKO_02312 [Citrobacter koseri ATCC BAA-895]
          Length = 219

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRGETIRHVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|220929987|ref|YP_002506896.1| polar amino acid ABC transporter inner membrane subunit
           [Clostridium cellulolyticum H10]
 gi|220000315|gb|ACL76916.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulolyticum H10]
          Length = 221

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 15/216 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLL 222
           + FG FL+     F + T++T   I + + +LG+++   L   ++SR+   K  +A+   
Sbjct: 1   MDFG-FLSEYWYYFVSGTVNTIV-IAILTVILGVIIGTGLALMKISRN---KILRAIASS 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI    I G P LV I L + L      L +F+  G +     ++   IA+S  + A++A
Sbjct: 56  YIE--FIRGTPLLVQITLFFYLI----SLPEFHIFGLAM--DRYIPGVIAMSVNSGAYVA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AV +GQMEAA ++G T  +A R ++LPQA+R+I+P L ++++ ++K SS+  
Sbjct: 108 EIIRAGIQAVDKGQMEAARSIGFTSGQAMRYIVLPQAIRNILPALGNEFVVVIKESSILS 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            +   +L+     +     +  E +++   IY  L+
Sbjct: 168 VISITELMRSSDIVKAAIYRPFEPLIVTACIYFVLT 203


>gi|325126636|gb|ADY85966.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 486

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200
           +V  +  K  +    + D SI+   G+  +N G     L M     I   + + V G++L
Sbjct: 253 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 309

Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +      + +H          + +P++ ++ F+  G+PTL    L ++L          
Sbjct: 310 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 355

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                    P F +  + L     A+I  IVR G  +V  GQ EAA +LGL + KA   V
Sbjct: 356 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 406

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQ  + +IP L +Q++  LK++S+  A+G  DL   G  +I Q  Q  ++ LI   +Y
Sbjct: 407 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQNFQGFKMWLIIAVMY 466

Query: 375 LSLSIMIALFMNRLNAKI 392
           L +  ++    N +  K+
Sbjct: 467 LIIITLLTWLSNYIQKKM 484


>gi|325275054|ref|ZP_08141042.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324099817|gb|EGB97675.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 365

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           PE MS        I +  + +A++AE+VR GL A+P+GQ EAA A+GL + +A  LV+LP
Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QA++ +IP + + ++ L K++SL + +G  DL++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315


>gi|313124773|ref|YP_004035032.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312281336|gb|ADQ62055.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 486

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200
           +V  +  K  +    + D SI+   G+  +N G     L M     I   + + V G++L
Sbjct: 253 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 309

Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +      + +H          + +P++ ++ F+  G+PTL    L ++L          
Sbjct: 310 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 355

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                    P F +  + L     A+I  IVR G  +V  GQ EAA +LGL + KA   V
Sbjct: 356 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 406

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQ  + +IP L +Q++  LK++S+  A+G  DL   G  +I Q  Q  ++ LI   +Y
Sbjct: 407 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQNFQGFKMWLIIAVMY 466

Query: 375 LSLSIMIALFMNRLNAKI 392
           L +  ++    N +  K+
Sbjct: 467 LIIITLLTWLSNYIQKKM 484


>gi|226951614|ref|ZP_03822078.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter sp. ATCC 27244]
 gi|294651271|ref|ZP_06728597.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226837644|gb|EEH70027.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter sp. ATCC 27244]
 gi|292822837|gb|EFF81714.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 227

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 75/132 (56%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+    +S  +A   + AA+ +EIVR+G+ ++P+GQ+ AA ALG+++ ++ RL++LPQA 
Sbjct: 94  TIDTALVSSIVAFMLFEAAYFSEIVRAGIQSIPKGQVAAAAALGMSYGQSMRLIILPQAF 153

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R + P L  Q + L ++S++  A+G  D         +  G   + IL    +Y ++S +
Sbjct: 154 RKMTPLLLQQTIILFQDSTMVYAIGLLDFFRTNYVRGDLMGLLTQYILFAGLVYFTVSAI 213

Query: 381 IALFMNRLNAKI 392
               + RL  ++
Sbjct: 214 ATFAVKRLQRRL 225



 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T  +     I    IGTL+   RLS+ K++  I + YV +FR+IP L+V+ + Y +
Sbjct: 21  GFSITIKVVVIATIGGIFIGTLLALMRLSSIKVLNLIAQAYVNLFRSIPLLLVLMWFYFA 80

Query: 152 V 152
           V
Sbjct: 81  V 81


>gi|227891344|ref|ZP_04009149.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|301301148|ref|ZP_07207305.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|227866922|gb|EEJ74343.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|300851277|gb|EFK79004.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 231

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 30/183 (16%)

Query: 191 VFSFVLGIVLSLFAT--RLSR------------HFHEKTGKALPLLYISTFLIFGLPTLV 236
           + SF+LG++L+L     R+S+             F+    ++ PLL     + FGLP L 
Sbjct: 25  IISFILGLILALVTALIRISQTKGPFLVIKAIFRFYVWLFRSTPLLVQLFIVYFGLPYLK 84

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +  L  +               G  + P F S  I  S  T A+ +E +R+ + ++P+GQ
Sbjct: 85  IKGLAPE---------------GIKLDP-FTSGIIVFSLNTGAYASETIRAAITSIPKGQ 128

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ++G+TH++A   +++PQA R  +PPL + ++ L+K++SLA ++   ++  V   I
Sbjct: 129 WEAAASIGMTHKQALMRIIIPQAARVSLPPLANSFIGLVKDTSLAASITIVEMFEVSQQI 188

Query: 357 INQ 359
             +
Sbjct: 189 AAE 191


>gi|330879088|gb|EGH13237.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 197

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 23/195 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T+   A   V   VLG +L+L     ++      G      +++PLL + T+    +P 
Sbjct: 19  MTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVP- 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                L++    D P+               F S  +A   + AA+  EIVR+G+ ++ +
Sbjct: 78  ---FVLRWITGEDTPI-------------GAFASCVVAFMMFEAAYFCEIVRAGVQSISK 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   
Sbjct: 122 GQMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASR 181

Query: 355 TIINQTGQAIEIILI 369
           +  +  G+A E ++I
Sbjct: 182 SSGDIIGRANEFLII 196



 Score = 45.1 bits (105), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 40/65 (61%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L   G++   ++GTL+   RLS+NKL+A +   YV  FR+IP L+VI + Y +
Sbjct: 16  GMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLA 75

Query: 152 VLSVL 156
           V  VL
Sbjct: 76  VPFVL 80


>gi|259506393|ref|ZP_05749295.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Corynebacterium
           efficiens YS-314]
 gi|259166034|gb|EEW50588.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Corynebacterium
           efficiens YS-314]
          Length = 318

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/77 (50%), Positives = 54/77 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA++AEIVRSG+ AVP GQMEA+ ALG+      R  +LPQAMR IIPP  ++
Sbjct: 158 LGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMGWSLTMRRTVLPQAMRIIIPPTGNE 217

Query: 331 YLNLLKNSSLAVAVGFA 347
            +++LK +SL VAV ++
Sbjct: 218 LISMLKTTSLVVAVPYS 234


>gi|119489534|ref|ZP_01622295.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Lyngbya sp. PCC 8106]
 gi|119454613|gb|EAW35760.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Lyngbya sp. PCC 8106]
          Length = 404

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 8/113 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +++A++AE VR GL A+PRGQ+EAA ALGL+      LV+LPQA++  IP +  Q
Sbjct: 275 VGLTMFSSAYLAENVRGGLQAIPRGQIEAAKALGLSTPLTLGLVVLPQALKISIPSIVGQ 334

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYL 375
           +++L ++++L   VG  +L+ +  +I+      G+  E+     IL W+F YL
Sbjct: 335 FISLFQDTTLLAIVGLVELLGMSRSILANPKFLGRYSEVYLFIGILYWLFCYL 387


>gi|66045740|ref|YP_235581.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256447|gb|AAY37543.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 220

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|317472894|ref|ZP_07932200.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|316899614|gb|EFV21622.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 227

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 96/172 (55%), Gaps = 15/172 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+       + + ++GI+  +F+         K    +  +Y+   +I G P +V + +
Sbjct: 20  LTLQLALASLICASIIGIIFGMFSVS-----KNKILNIICKIYVD--IIRGTPLVVQVFI 72

Query: 241 KY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            Y      F +P+   ++  GG      F++  +ALS    A++AEIVR G+ +V +GQM
Sbjct: 73  MYYGVAGAFLQPMDLNWDDFGG-----PFVAAVVALSLNAGAYMAEIVRGGIESVDKGQM 127

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           EAA +LGL + KA   V+LPQA+R+++P + +Q++  +K++SL  A+G  +L
Sbjct: 128 EAARSLGLPYGKAMSKVILPQAIRTMLPSIINQFIISIKDTSLVYAIGIREL 179



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 36/57 (63%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           T  LA + +I A+IIG + G   +S NK++  IC++YV++ R  P +V +F +Y  V
Sbjct: 21  TLQLALASLICASIIGIIFGMFSVSKNKILNIICKIYVDIIRGTPLVVQVFIMYYGV 77


>gi|294810979|ref|ZP_06769622.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294323578|gb|EFG05221.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 279

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 5/117 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA+IAE +R+G+ AVPRGQ+EAA +LG +H +A   V++PQA R ++PPLT++
Sbjct: 151 LGLGLVAAAYIAETIRAGIQAVPRGQLEAARSLGFSHARAMVSVIIPQAFRIVVPPLTNE 210

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            + L K+SSL + +G      +L   G  + +Q+  +   IL+    YL +++ + L
Sbjct: 211 LVLLFKDSSLVLFLGVTLEERELTKFGRDLASQSANSTP-ILVAGVCYLLVTVPLGL 266


>gi|323529853|ref|YP_004232005.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386855|gb|ADX58945.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 251

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 84/147 (57%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +GQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  MGQFGVIRESFLWPVLREPYLCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ +I   +  L A+++
Sbjct: 198 FICAALIYLFLNFVIVRALGLLEARLS 224


>gi|227818417|ref|YP_002822388.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337416|gb|ACP21635.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 234

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 61/96 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+++ + L  Y  AF++E+VR G++A+  GQMEA+ ALG ++  A R V+LPQA+ ++
Sbjct: 97  PSFLTMLVTLVVYQGAFLSEVVRGGIVALGHGQMEASRALGHSYLGAMRYVILPQALYNV 156

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           IP + S ++  +K+++L   +   DL      I NQ
Sbjct: 157 IPSIISVFVATIKDTTLGYVINVPDLTFAASQINNQ 192


>gi|227549082|ref|ZP_03979131.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078864|gb|EEI16827.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 310

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 82/142 (57%), Gaps = 10/142 (7%)

Query: 225 STFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +TF+ F   +P L+L+   YQ          FN +    ++  F ++  AL+ Y  + IA
Sbjct: 108 ATFIEFFRAIPVLLLMIFLYQF------FAVFNVVPPRGLA--FWAVVTALTLYNGSVIA 159

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++PRGQ EAA ALG+TH +    +LLPQ++ +++P L +Q +  LK+S+L  
Sbjct: 160 EILRAGIRSLPRGQTEAAHALGMTHWQTMWKILLPQSVAAMLPALIAQMVIALKDSALGY 219

Query: 343 AVGFADLVSVGGTIINQTGQAI 364
            +G+ ++V  G  + +     I
Sbjct: 220 QIGYVEVVRSGTQVASSNSNYI 241



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+E    + ++   P+ + +++ T IL G   T   A   ++ A I G ++G GRL+  K
Sbjct: 43  LAENGQLDAEK-WTPFVNANTWTTYILPGLWGTIKAAALSILLALIFGVVLGLGRLAELK 101

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK--SVLSVLP 157
            V W+C  ++E FR IP L+++ FLY+  +V +V+P
Sbjct: 102 AVRWLCATFIEFFRAIPVLLLMIFLYQFFAVFNVVP 137


>gi|222102265|ref|YP_002546855.1| ABC-type amino acid transport system, permease component
           [Agrobacterium radiobacter K84]
 gi|221728382|gb|ACM31391.1| ABC-type amino acid transport system, permease component
           [Agrobacterium radiobacter K84]
          Length = 356

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 62/83 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE++R+GL ++P GQ+EAA +LG  + + T+LV+LPQA+R++IP + + 
Sbjct: 226 IGITLFVSAYLAEVIRAGLQSIPAGQLEAAYSLGFGYWRTTQLVVLPQALRAVIPAIVNL 285

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
            + +L N+SL   +G +DL++ G
Sbjct: 286 SIGILLNTSLLAVIGISDLLNTG 308


>gi|170758854|ref|YP_001786802.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169405843|gb|ACA54254.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 219

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   AA+++EI+R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + 
Sbjct: 94  IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRLQNLYYIILPQAVKISVPPLVNG 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
           + +LLK++SL   +   +L   G  I ++T +  E+ L     Y  L+ M+++   F+ +
Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTARPFEVYLTLGLFYFVLTYMVSICSKFIEK 213

Query: 388 LNAK 391
            N K
Sbjct: 214 RNEK 217


>gi|163841001|ref|YP_001625406.1| ABC transporter, nucleotide binding/ATPase protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954477|gb|ABY23992.1| ABC transporter, nucleotide binding/ATPase protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 381

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 109/194 (56%), Gaps = 24/194 (12%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYI----STFLIFGLPTLVLIALKYQLHF--D 247
           FVLG +L+L   R+S           PLL+      T++   +P LV + L Y L +  +
Sbjct: 94  FVLGFLLALM--RISSS---------PLLWTVSWAYTWIFRSVPLLVQLLLWYNLGYLYE 142

Query: 248 KPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           K  LG      F  +  +T+  +F +  + L+ + AA+ AEI+R G+++V +GQ+EAA A
Sbjct: 143 KIQLGVPFGPVFFEVQTTTLISQFAAAVLGLTLHQAAYSAEIIRGGILSVDQGQLEAAAA 202

Query: 303 LGLTH-RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           LG+   R+A R+VL PQA+R+I+P   ++ + L+K +S+   + +++L      + N+T 
Sbjct: 203 LGIPRSRRALRIVL-PQALRAILPSAFNEIIGLVKGTSVVYVLAYSELFYTIQVVYNRTQ 261

Query: 362 QAIEIILIWMFIYL 375
           Q I ++L+    Y+
Sbjct: 262 QVIPLLLVATLWYV 275


>gi|15802353|ref|NP_288379.1| putative transport system permease protein (former yecC)
           [Escherichia coli O157:H7 EDL933]
 gi|15831910|ref|NP_310683.1| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|168751844|ref|ZP_02776866.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168758229|ref|ZP_02783236.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168764460|ref|ZP_02789467.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168771522|ref|ZP_02796529.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168777342|ref|ZP_02802349.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168783312|ref|ZP_02808319.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168790326|ref|ZP_02815333.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168802262|ref|ZP_02827269.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|195939222|ref|ZP_03084604.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208810409|ref|ZP_03252285.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816908|ref|ZP_03258028.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208819783|ref|ZP_03260103.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209397535|ref|YP_002271032.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217328790|ref|ZP_03444871.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254793568|ref|YP_003078405.1| putative ABC transporter membrane protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261227587|ref|ZP_05941868.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255817|ref|ZP_05948350.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283095|ref|YP_003499913.1| putative transport system permease protein [Escherichia coli O55:H7
           str. CB9615]
 gi|12516016|gb|AAG56933.1|AE005414_10 putative transport system permease protein (former yecC)
           [Escherichia coli O157:H7 str. EDL933]
 gi|13362124|dbj|BAB36079.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187767392|gb|EDU31236.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014175|gb|EDU52297.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188999304|gb|EDU68290.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189354909|gb|EDU73328.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189359723|gb|EDU78142.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189365552|gb|EDU83968.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189370189|gb|EDU88605.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189375708|gb|EDU94124.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|208724925|gb|EDZ74632.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208731251|gb|EDZ79940.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208739906|gb|EDZ87588.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209158935|gb|ACI36368.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209767008|gb|ACI81816.1| putative transport system permease protein [Escherichia coli]
 gi|209767010|gb|ACI81817.1| putative transport system permease protein [Escherichia coli]
 gi|209767012|gb|ACI81818.1| putative transport system permease protein [Escherichia coli]
 gi|209767014|gb|ACI81819.1| putative transport system permease protein [Escherichia coli]
 gi|209767016|gb|ACI81820.1| putative transport system permease protein [Escherichia coli]
 gi|217318137|gb|EEC26564.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254592968|gb|ACT72329.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290762968|gb|ADD56929.1| putative transport system permease protein [Escherichia coli O55:H7
           str. CB9615]
 gi|320191893|gb|EFW66540.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320641766|gb|EFX11154.1| amino acid ABC transporter permease [Escherichia coli O157:H7 str.
           G5101]
 gi|320647126|gb|EFX15959.1| amino acid ABC transporter permease [Escherichia coli O157:H- str.
           493-89]
 gi|320652409|gb|EFX20707.1| amino acid ABC transporter permease [Escherichia coli O157:H- str.
           H 2687]
 gi|320658011|gb|EFX25773.1| amino acid ABC transporter permease [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658583|gb|EFX26277.1| amino acid ABC transporter permease [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668481|gb|EFX35308.1| amino acid ABC transporter permease [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326342326|gb|EGD66107.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7
           str. 1044]
 gi|326344833|gb|EGD68580.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7
           str. 1125]
          Length = 222

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYTAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYTAETL 107


>gi|325695641|gb|EGD37541.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 521

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHSQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|228996156|ref|ZP_04155807.1| Amino acid ABC transporter [Bacillus mycoides Rock3-17]
 gi|228763606|gb|EEM12502.1| Amino acid ABC transporter [Bacillus mycoides Rock3-17]
          Length = 226

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 94/157 (59%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +FV+GI+L++F T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 27  TTIPLTIITFVIGIILAIF-TALARISSSRLLQWIARIYVS--IIRGTPLLVQL---FII 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          + P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 81  FYGLPTLN-------IEIDP-YPAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + ++LPQA R  IPPL++ +++L+K++SLA
Sbjct: 133 MTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 169



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 105 IPATIIGTLVGA--------GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IP TII  ++G          R+S+++L+ WI R+YV + R  P LV +F ++
Sbjct: 29  IPLTIITFVIGIILAIFTALARISSSRLLQWIARIYVSIIRGTPLLVQLFIIF 81


>gi|172040836|ref|YP_001800550.1| putative ABC transport system, permease protein [Corynebacterium
           urealyticum DSM 7109]
 gi|171852140|emb|CAQ05116.1| putative ABC transport system, permease protein [Corynebacterium
           urealyticum DSM 7109]
          Length = 325

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 1/106 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA++AEIVR+G+ AVP GQ EA+ ALG+T  +  R  +LPQAMR IIPP  ++
Sbjct: 163 IGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWWQNMRRTVLPQAMRIIIPPTGNE 222

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYL 375
            +++LK +SL + V ++ +L      I N   Q + ++L+    YL
Sbjct: 223 LISMLKTTSLVIVVPYSGELFGKATDISNSIFQPVPLLLVAASWYL 268


>gi|256380966|ref|YP_003104626.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255925269|gb|ACU40780.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 278

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 63/94 (67%), Gaps = 4/94 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    AA+IAE +R+G+ AVP+GQ+EAA +LG++  + T  V++PQA R I+PPLT++
Sbjct: 133 IALGVVGAAYIAETIRAGIKAVPKGQLEAARSLGMSQGRTTVTVVIPQAFRIILPPLTNE 192

Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQT 360
            + L K+SSL   +G      +L   G  +++Q+
Sbjct: 193 LIMLTKDSSLISIIGLIATQRELTKYGREVLSQS 226


>gi|225019854|ref|ZP_03709046.1| hypothetical protein CLOSTMETH_03808 [Clostridium methylpentosum
           DSM 5476]
 gi|224947414|gb|EEG28623.1| hypothetical protein CLOSTMETH_03808 [Clostridium methylpentosum
           DSM 5476]
          Length = 220

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 6/171 (3%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G P L+ +       +  PV+G   FI     S  F S  +A     +A+ AEI R
Sbjct: 55  YVVRGTPLLLQLLFFCFGLYYLPVIGPAIFI-----SNRFASATVAFIINYSAYFAEIFR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL+AV +GQ EAA  LGL   +    +++PQ +R  +P L+++ + L+K+++L  +VG 
Sbjct: 110 GGLLAVDKGQYEAAQVLGLRRGQTMFRIIIPQMVRVCMPTLSNEAVTLVKDTALLYSVGV 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++++   TI+N T   I    I   IYL L+ +++  + R+  K++  E 
Sbjct: 170 VEILTQAKTIVNGTYN-ISAYFIAAIIYLILNTILSFGLKRIEKKLSFGED 219


>gi|187779934|ref|ZP_02996407.1| hypothetical protein CLOSPO_03530 [Clostridium sporogenes ATCC
           15579]
 gi|187773559|gb|EDU37361.1| hypothetical protein CLOSPO_03530 [Clostridium sporogenes ATCC
           15579]
          Length = 219

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 18/208 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHF 246
           KI + SF++ I+L+     L  +   K  K L L+  +   IF G P L+ +   + +++
Sbjct: 24  KITLLSFIVAIILAFIVGVLRTY---KFSKILDLILNAYVEIFRGSPLLIQL---FFIYY 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G         +  E  ++ I L+   AA+++EI+R+ ++++ RGQ EA  +LG T
Sbjct: 78  GLPSVG-------IAMDAEVAAV-IGLALNGAAYMSEIIRAAILSIDRGQEEAGFSLGYT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++LPQA +  +PPL + + +LLK++SL   +   +L   G  I ++T +  E+
Sbjct: 130 RFQNLRYIILPQAAQISVPPLVNGFSSLLKDTSLVSVISITELTRSGNLIYSRTARPFEV 189

Query: 367 ILIWMFIYLSLSIMIAL---FMNRLNAK 391
            L     Y  L+ +++L   F+ + N K
Sbjct: 190 YLTLGLFYFVLTYIVSLCSKFIEKRNEK 217


>gi|149204304|ref|ZP_01881271.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. TM1035]
 gi|149142189|gb|EDM30236.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. TM1035]
          Length = 218

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 73/127 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IA   + AA+ +EI+R+G+ +V  GQ+ A  A GL + +  R ++LPQA R++IP
Sbjct: 90  FYSALIAFVMFEAAYYSEIMRAGIQSVRTGQVHAGQATGLGYWQIQRYIVLPQAFRNMIP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q + L +++SL   V   DL++    +    G+ +E+ L    +Y  +    +LF+
Sbjct: 150 ILVTQGIILFQDTSLVFVVSLRDLMTASSIVARTEGRLVEMYLFAALVYFVICFSGSLFV 209

Query: 386 NRLNAKI 392
            RL A++
Sbjct: 210 RRLQARM 216



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   + WL F  ++    +GTL+   RLS  K +A     YV + R++P ++VIF+ Y
Sbjct: 19  GLQLSLWLTFLAVLGGIALGTLLALARLSGIKPLAIFAAAYVNLIRSVPLILVIFWFY 76


>gi|121593168|ref|YP_985064.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|120605248|gb|ABM40988.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 217

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 76/130 (58%), Gaps = 1/130 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +   A +   AA+ AEI R+G+ +V RGQ EAA  LG+++ +  R ++LPQ +RSI
Sbjct: 85  PDFPAAVAAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLGMSYGQTMRRIVLPQMVRSI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   DL+     I+ +       I+   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFIVAAAF-YLVMTLVLTW 203

Query: 384 FMNRLNAKIA 393
              RL  + A
Sbjct: 204 GFQRLEKRYA 213


>gi|307710415|ref|ZP_07646854.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
 gi|307618827|gb|EFN97964.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
          Length = 521

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|302337441|ref|YP_003802647.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634626|gb|ADK80053.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 212

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 84/145 (57%), Gaps = 11/145 (7%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F  GS VSP  ++  + LS Y  A+IAEIVR+G+ A+P+GQ E A ++GL+       V+
Sbjct: 71  FFSGSFVSP-IVTAIVVLSVYHGAYIAEIVRAGISAIPKGQHEGADSIGLSVIAKMVHVI 129

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQ   SIIP L  QY+ L+K+++L  A+G  +L       +N   Q ++++   + +Y+
Sbjct: 130 MPQVWLSIIPSLVGQYIILIKDTTLISAIGVMEL-------LNNARQIMQVVYRPITVYV 182

Query: 376 SLSI---MIALFMNRLNAKIALKEK 397
            +++   +I  F+  L+  +  + K
Sbjct: 183 IVAVFFFVICFFLENLSKHLERRIK 207


>gi|270293390|ref|ZP_06199599.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M143]
 gi|270278239|gb|EFA24087.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M143]
          Length = 520

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 491


>gi|255528435|ref|ZP_05395231.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296188320|ref|ZP_06856712.1| putative ectoine/hydroxyectoine ABC transporter, permease protein
           EhuC [Clostridium carboxidivorans P7]
 gi|255507869|gb|EET84313.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296047446|gb|EFG86888.1| putative ectoine/hydroxyectoine ABC transporter, permease protein
           EhuC [Clostridium carboxidivorans P7]
          Length = 215

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 30/204 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           +T++      V   +LG+ L+L         R+   F+    +  PLL    F  +GLP 
Sbjct: 19  MTIELTVIALVVGTILGVFLALLKLSKNVVFRIISSFYTWIFRGTPLLLQLFFFYYGLPF 78

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +                       G  ++P F +  I LS    A++AEI+R G+ ++ +
Sbjct: 79  M-----------------------GVELTP-FSAAAIGLSLNCGAYMAEIIRGGIQSIDK 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALG T+    + ++LPQ  + IIPP+ ++++ LLK++SL   +   +L+    
Sbjct: 115 GQFEAAKALGFTYADTMKKIILPQTFKVIIPPVGNEFIALLKDTSLVSTIAMVELMRSAQ 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378
            I   T + IE+      +YL L+
Sbjct: 175 QIYASTFRPIEVFFTAGILYLLLT 198


>gi|120555956|ref|YP_960307.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinobacter aquaeolei VT8]
 gi|120325805|gb|ABM20120.1| amino acid ABC transporter membrane protein, PAAT family
           [Marinobacter aquaeolei VT8]
          Length = 237

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 29/192 (15%)

Query: 193 SFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            FVLGIV  L +       R     + +  +  P+L    F+ +GLP LV          
Sbjct: 51  GFVLGIVFGLLSINKNWFLRWPATAYIEIFRGTPILVQVLFIFYGLPDLV---------- 100

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G  + P   +   A++  + A+I+E+VR G+ ++ +GQ EA ++LGL+
Sbjct: 101 ------------GGPIDP-LTAGIAAIALNSGAYISEVVRGGVQSIDKGQTEAGLSLGLS 147

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQA R +IPPL +Q +  +K++SL   +G  +LV  G   I  T  A E+
Sbjct: 148 RSQTFWNIVWPQAFRRMIPPLGNQAIVSIKDTSLFSVIGVGELVRQGQVYIANTFTAFEV 207

Query: 367 ILIWMFIYLSLS 378
             +   +YL+++
Sbjct: 208 YFVVAIMYLAIT 219


>gi|330505510|ref|YP_004382379.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328919796|gb|AEB60627.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 229

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 110/204 (53%), Gaps = 18/204 (8%)

Query: 188 KIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           ++   + + G++L+L     R S+H++ +   ALP  YI  F   G P LV + L Y   
Sbjct: 22  ELLAVAVIAGLILALPMGIARASKHWYVR---ALPYGYI--FFFRGTPMLVQLFLIYY-- 74

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                L QF+ +  S   P     Y    + ++ +TAA+IAEI+R  + AVP G++EAA 
Sbjct: 75  ----GLAQFDAVRQSVFWPYLRDPYWCAVLTMTLHTAAYIAEILRGAIQAVPPGEIEAAR 130

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALG++  +A   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  T+  +T 
Sbjct: 131 ALGMSRAQAMLHIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTLNARTY 190

Query: 362 QAIEIILIWMFIYLSLS-IMIALF 384
            ++E        YL+++ ++I LF
Sbjct: 191 VSMEFFFTAALFYLAITFVLINLF 214


>gi|296329884|ref|ZP_06872368.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676610|ref|YP_003868282.1| putative ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152923|gb|EFG93788.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414854|gb|ADM39973.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 224

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 23/217 (10%)

Query: 177 SFPTLTMDTNAKIF------VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +FPTL       +F      VF+ + G++L+L         H+     L  LYIS F   
Sbjct: 12  AFPTLIQALPITLFMAIAAMVFAIIGGLILALITKNKIPVLHQ-----LSKLYISFFR-- 64

Query: 231 GLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           G+PTLV L  + Y L    P + +   +  +          I LS   AA++AEI R+ L
Sbjct: 65  GVPTLVQLFLIYYGLPQLFPEMSKMTALTAAI---------IGLSLKNAAYLAEIFRAAL 115

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQ+EA +++G+T  +A R ++LPQA+R+ IP   + ++ LLK +SLA  +G  ++
Sbjct: 116 NSVDDGQLEACLSVGMTKLQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTLGVMEM 175

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + G    +   +  E  L    +Y  L+I+ ++  +
Sbjct: 176 FAQGKMYASGNLKYFETYLAVAIVYWVLTIIYSILQD 212


>gi|169630135|ref|YP_001703784.1| putative glutamate ABC transporter, permease [Mycobacterium
           abscessus ATCC 19977]
 gi|169242102|emb|CAM63130.1| Putative glutamate ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 227

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 5/126 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S YTA F+ E +RSG   VP GQ EAA +LGL   +   L++LPQAMRS++ P+ S 
Sbjct: 101 LGFSLYTATFVCETLRSGFNTVPLGQAEAARSLGLPFWRVLTLIVLPQAMRSVLAPMGSV 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILI----WMFIYLSLSIMIALFM 385
            + L+KN+S+A A+G A+   +  + I     Q + I LI    +M I L++ +    F 
Sbjct: 161 LIALVKNTSIASAIGVAEAALLMRSEIELFADQIVWIFLIIAAGYMVITLTIGLSFGYFA 220

Query: 386 NRLNAK 391
            RL  K
Sbjct: 221 KRLAVK 226


>gi|326333231|ref|ZP_08199478.1| glutamate permease [Nocardioidaceae bacterium Broad-1]
 gi|325948875|gb|EGD40968.1| glutamate permease [Nocardioidaceae bacterium Broad-1]
          Length = 295

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 78/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++ + L  Y  + +AE++R+G+ A+P+GQ EA +A+GL+  +  R +LLPQA+RS++P
Sbjct: 138 FWAVVLGLMLYNGSVLAEVIRAGVNALPKGQSEAGVAIGLSPGQVMRTILLPQAVRSMLP 197

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +Q + LLK+++L   + + +L++    I       I   ++   IY+S++ ++ L  
Sbjct: 198 AIIAQLVVLLKDTALGYILAYDELLNQINKIEGNYDNLIPAAIVVALIYISINTILGLVA 257

Query: 386 NRLNAK 391
           N + A+
Sbjct: 258 NFVEAR 263


>gi|323495727|ref|ZP_08100797.1| ABC transporter ATP-binding/permease protein [Vibrio sinaloensis
           DSM 21326]
 gi|323319194|gb|EGA72135.1| ABC transporter ATP-binding/permease protein [Vibrio sinaloensis
           DSM 21326]
          Length = 265

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 15/188 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S    + + L  T L +  +   G+A+   YI   LI   P LV I L Y +   
Sbjct: 69  KISVISLAFTLAIGL-TTALLKLSNSIIGRAIANTYIE--LIRNTPLLVQIYLLYFVF-- 123

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PV+G             F +  +ALS +  A+ AEI R GL ++ +GQ EAA +LGL  
Sbjct: 124 GPVIGL----------DRFSTAVLALSLFQGAYTAEIFRGGLNSIDKGQFEAAKSLGLNR 173

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
                 V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL + G  I+ +T    EI 
Sbjct: 174 FFTYYDVILPQLIQRTLPPLTNEVVSLVKNSSIVSVMAIFDLTTEGRNIVAETAMPFEIW 233

Query: 368 LIWMFIYL 375
                IYL
Sbjct: 234 FTVAAIYL 241


>gi|293605796|ref|ZP_06688169.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292815791|gb|EFF74899.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 229

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 10/128 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P L       G  +S  F +L  AL  Y +A+++E++RSG+ 
Sbjct: 70  GMPLLMLIFWAY---FVVPKLT------GQVIS-GFWTLIFALVVYESAYLSEVIRSGIE 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ+EA+ +LG+ +    R V+LPQA+ +++P +TSQ+++ +K +SL   +   +L 
Sbjct: 120 AVPRGQIEASRSLGVGYWTTMRKVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELT 179

Query: 351 SVGGTIIN 358
                I N
Sbjct: 180 FAANQINN 187


>gi|227891736|ref|ZP_04009541.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
 gi|227866461|gb|EEJ73882.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
          Length = 485

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L                         T  P F++  I L+  
Sbjct: 331 RGLPLLVLALFIYNGIPSLT-----------------------GTKIPAFIAGIITLTLN 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV +GQMEAA +LGL+  KA + ++LPQ ++ ++P   +Q++  LK
Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G  +L   G  II +  +  ++  I   +YL +  ++    N L  K+
Sbjct: 428 DTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 34/66 (51%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T +L   G+I ATI G ++G   +  NK    +    + +FR +P LV+  F+Y
Sbjct: 284 LNGLWKTIYLTILGIIGATIFGIIIGFLGVIPNKFAQGVSTTVIYIFRGLPLLVLALFIY 343

Query: 150 KSVLSV 155
             + S+
Sbjct: 344 NGIPSL 349


>gi|237730788|ref|ZP_04561269.1| glutamine ABC transporter permease [Citrobacter sp. 30_2]
 gi|226906327|gb|EEH92245.1| glutamine ABC transporter permease [Citrobacter sp. 30_2]
          Length = 219

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 14/212 (6%)

Query: 186 NAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            AK+ ++  VLG+   L    A   +R F       + L++I   +I G P +V +   Y
Sbjct: 18  GAKMTLWISVLGLAGGLIIGLAAGFARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY 75

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +A
Sbjct: 76  ---FALPM--AFNDL---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLA 126

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +
Sbjct: 127 LGLSRTETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFR 186

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+EI       YL ++++++  + RL  ++ +
Sbjct: 187 ALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218


>gi|225858303|ref|YP_002739813.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|225720142|gb|ACO15996.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
          Length = 521

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|222109927|ref|YP_002552191.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           ebreus TPSY]
 gi|221729371|gb|ACM32191.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax ebreus TPSY]
          Length = 217

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 32/222 (14%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFG 231
            +T+   A   V +  LG+VL+L   R+SR               +  PL+    F+ F 
Sbjct: 16  AVTLKLFAITLVLAVPLGLVLAL--ARVSRFAPLSAAVNGYIWLMRGTPLMLQMLFIYFA 73

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP + +I ++                      P+F +   A +   AA+ AEI R+G+ +
Sbjct: 74  LPFVPVIGVRL---------------------PDFPAAVAAFALNYAAYFAEIFRAGIQS 112

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ EAA  LG+++ +  R ++LPQ +RSI+PP++++ + L+K++SL   +   DL+ 
Sbjct: 113 VDRGQYEAAKVLGMSYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLR 172

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I+ +       I+   F YL +++++     RL  + A
Sbjct: 173 AARGIVQRDFTTTPFIVAAAF-YLVMTLVLTWGFQRLEKRYA 213


>gi|308178203|ref|YP_003917609.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter arilaitensis Re117]
 gi|307745666|emb|CBT76638.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter arilaitensis Re117]
          Length = 263

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 80/135 (59%), Gaps = 4/135 (2%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T  P+ +++  AL   +AA+IAE +R+GL AVP+GQ EAA +LG+   +A   +++PQA 
Sbjct: 123 TQWPQSVNVMCALGLVSAAYIAETLRAGLQAVPKGQTEAARSLGMPAWRAMVTIVIPQAF 182

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           R ++PP+T++ + L K++SLA  +G      ++   G   I Q    I  +++    YL 
Sbjct: 183 RIVLPPMTNEIILLTKDTSLAFILGATIAQYEMTKFGRDGITQLDAGITPLVVAGLFYLV 242

Query: 377 LSIMIALFMNRLNAK 391
           ++I ++L   +  ++
Sbjct: 243 ITIPLSLVARKFESR 257


>gi|307711328|ref|ZP_07647748.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307616844|gb|EFN96024.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 521

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|229159505|ref|ZP_04287521.1| Amino acid ABC transproter, permease [Bacillus cereus R309803]
 gi|228623962|gb|EEK80772.1| Amino acid ABC transproter, permease [Bacillus cereus R309803]
          Length = 230

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 19/223 (8%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           ++PTL   T    ++ + S VLG ++ L FA    R  + K   ++  +YI+  +I G P
Sbjct: 8   TYPTLLKATVVTLQLTLTSLVLGSLIGLLFA--FFRISNNKILNSIAHVYIA--IIRGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V IA+ Y           F        +P F +  IAL+ +  A+I EI R  + +V 
Sbjct: 64  LIVQIAILY-----------FGITSVIVFTP-FWAGAIALAIHNGAYITEIFRGSIQSVD 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G
Sbjct: 112 RGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSG 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 172 LSIAAGNFQQLDTYVIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T +L   V T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +
Sbjct: 7   STYPT-LLKATVVTLQLTLTSLVLGSLIGLLFAFFRISNNKILNSIAHVYIAIIRGTPLI 65

Query: 143 VVIFFLYKSVLSVL 156
           V I  LY  + SV+
Sbjct: 66  VQIAILYFGITSVI 79


>gi|227819410|ref|YP_002823381.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227338409|gb|ACP22628.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 224

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 13/173 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY++  +I   P LVL+   Y   F  P LG    +G      +  S  + L+ Y+ A++
Sbjct: 63  LYVT--IIRNTPILVLVLFSY---FALPELGVR--LG------KIESFVLTLAIYSGAYL 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R GLIAVP GQ EA +A+GLT  +    +++P  +R+++P L S  ++L K++SLA
Sbjct: 110 AEVFRGGLIAVPPGQREAGLAIGLTEMQIRTSIIIPLMLRNVLPSLGSTMISLFKDTSLA 169

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+   +L      I  +T + IE  ++   +Y++   ++A  M  +  ++A+
Sbjct: 170 AAIAVPELTFEARKINVETFRVIETWIVASCLYVATCSLLAALMRAVERRLAV 222


>gi|91225416|ref|ZP_01260538.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91189779|gb|EAS76052.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 306

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 1/160 (0%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L L  L    + +   L +F F G S +     S  + +   ++A+IAE+VR GL +
Sbjct: 142 IPLLGLEDLLRNYNGEPNALQRFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRGGLQS 200

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA +LGL+     R V+ PQ ++SI P L  Q ++L+K++S+   +   ++  
Sbjct: 201 IDQGQWEAADSLGLSRWVKYRFVIAPQVLKSITPALAGQTISLVKDTSIVSLISIQEMTF 260

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  + N +G   EI LI    Y  +   ++L    + AK
Sbjct: 261 VGTEMANSSGYIFEIWLIVGLAYFLICFGLSLIFRHIEAK 300


>gi|288960700|ref|YP_003451040.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913008|dbj|BAI74496.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 219

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP  ++ +I L+ Y A+F  EI+R G+I+V  GQ +A  ALG+   +    V+LPQ
Sbjct: 85  GIELSPS-VAAFITLTLYGASFFGEIIRGGIISVDMGQWDAGRALGMRRHQLMGGVILPQ 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R ++PPL +Q +  LKN+SL   +   DL+  G  I + + + +E   +   IY  + 
Sbjct: 144 AFRRMVPPLVNQTVLQLKNTSLLSVLAVPDLLYQGQLITSASYRPLETYTMIAVIYFIIL 203

Query: 379 IMIALFMNRLNAKIA 393
             +  F +RL A+++
Sbjct: 204 FPLTRFAHRLEARMS 218


>gi|225856181|ref|YP_002737692.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|225725803|gb|ACO21655.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
          Length = 521

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|124027569|ref|YP_001012889.1| glutamine transport system permease protein glnP [Hyperthermus
           butylicus DSM 5456]
 gi|123978263|gb|ABM80544.1| glutamine transport system permease protein glnP [Hyperthermus
           butylicus DSM 5456]
          Length = 233

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 73/118 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +E +R+ L AV  GQ EAA+ALG+T  +A   ++LP  +R+ IP LT++ + LLK
Sbjct: 104 SAAYQSEYLRASLRAVHTGQWEAALALGMTRWQAITSIILPIGLRTAIPALTNELVYLLK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SS+A  +   +LV  G  I ++T   +E+  I   +YL+ S+ I   M RL  K+A+
Sbjct: 164 YSSIAYFLAVVELVYAGKIIGSETFAYLEVYTIIALVYLAFSLAITRTMKRLEKKVAI 221



 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
            E+ Q I    S+  Y + +  G  NT  L  +       +GTL+  GRL   + + W+ 
Sbjct: 1   MELLQRIAELLSEPRYVSLLAEGIRNTLILTAASFTMGFALGTLIAIGRLYGPRPLRWLL 60

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP------FGMFLNN 173
             YVE+ R  P L+ +F LY +      +P   I L        GM LN+
Sbjct: 61  AGYVELIRGTPMLLQLFILYYA------LPQAGISLAAMTAAILGMGLNS 104


>gi|121610276|ref|YP_998083.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554916|gb|ABM59065.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 223

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 75/118 (63%), Gaps = 1/118 (0%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP   +L IA+     A+  EI+R+G+ ++P+GQ+EA +AL L   +  RLV+L  A+R+
Sbjct: 88  SPHTAAL-IAMVVNLGAYATEIIRAGIESIPKGQIEAGLALNLKAHQIFRLVVLKPALRA 146

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           I P L+SQ++ L+  SS+   +   DL SV   + ++T ++ EI ++   IYLSL+++
Sbjct: 147 IFPALSSQFILLMLTSSVVSVISADDLTSVAANLQSRTFRSFEIYIVVTAIYLSLALI 204


>gi|315037817|ref|YP_004031385.1| glutamine ABC transporter membrane protein [Lactobacillus
           amylovorus GRL 1112]
 gi|325956292|ref|YP_004286902.1| glutamine ABC transporter membrane protein [Lactobacillus
           acidophilus 30SC]
 gi|312275950|gb|ADQ58590.1| glutamine ABC transporter membrane protein [Lactobacillus
           amylovorus GRL 1112]
 gi|325332857|gb|ADZ06765.1| glutamine ABC transporter membrane protein [Lactobacillus
           acidophilus 30SC]
 gi|327183111|gb|AEA31558.1| glutamine ABC transporter membrane protein [Lactobacillus
           amylovorus GRL 1118]
          Length = 218

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLIRYMKVKYLSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  +  A +AEIVRSG+ +V  GQME A + G++
Sbjct: 83  ------------GIVTNPTTASI-TALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+ ++IP L SQ+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YGQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           I +I   +Y  +   ++   N L  K
Sbjct: 190 IYVIIAVMYFIVCFCLSQVANYLQKK 215


>gi|311895157|dbj|BAJ27565.1| putative glutamate ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 285

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 79/146 (54%), Gaps = 3/146 (2%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+L    FI  +  +P   +L   L+ Y  + +AE+ R+G++AVPRGQ EAA ALGL   
Sbjct: 116 PLLVMIFFIFVALKAPPMWALVAGLALYNGSVLAEVFRAGVLAVPRGQKEAAYALGLRKT 175

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    VL+PQA R+++P + SQ +  LK++SL   + + + +  G  I       +  I 
Sbjct: 176 QVMAYVLVPQANRAMLPAIVSQLVVALKDTSLGFLITYEEFLHAGKLIATNLDYDLPFIP 235

Query: 369 IWMFI---YLSLSIMIALFMNRLNAK 391
           + M I   Y+ + ++++ F   L  +
Sbjct: 236 VVMVIAPVYIGMCLLLSWFAKWLERR 261



 Score = 43.1 bits (100), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 27/39 (69%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G L  AGRLS ++ V W+  V VE FR +P LV+IFF++
Sbjct: 87  GALFAAGRLSEHRAVRWVSTVVVEFFRAMPLLVMIFFIF 125


>gi|257093094|ref|YP_003166735.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045618|gb|ACV34806.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 252

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 77/134 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    IALS    A+  E VR+G++AVP GQ+EAA ALGLT  +    ++LPQ+MR  +
Sbjct: 119 DFACAAIALSLNVGAYNTECVRAGILAVPHGQVEAARALGLTPMQTFMDIVLPQSMRVAL 178

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +   +L+K+SSLA A+   +L  VG  +  ++ Q I + +    IYL L+      
Sbjct: 179 PALANNLASLVKDSSLAYAISVVELTMVGYRVQAESYQPIPVFITVAAIYLILTTAFTTL 238

Query: 385 MNRLNAKIALKEKK 398
              L +++ + +K+
Sbjct: 239 TAALESQLDVGQKR 252



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 17/132 (12%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           +IG L G G+LS    + W+C  YV + R  P L+ I F++      L  P   +++P G
Sbjct: 64  VIGVLAGLGKLSRFWPLRWLCDSYVWLIRGTPLLLQILFVW------LAFP---LLMPEG 114

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           + L++   +   L+++  A  +    V   +L++       H   +  +AL L  + TF+
Sbjct: 115 VELSDFACAAIALSLNVGA--YNTECVRAGILAV------PHGQVEAARALGLTPMQTFM 166

Query: 229 IFGLPTLVLIAL 240
              LP  + +AL
Sbjct: 167 DIVLPQSMRVAL 178


>gi|146308573|ref|YP_001189038.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145576774|gb|ABP86306.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 365

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 66/112 (58%), Gaps = 17/112 (15%)

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L   +HFDK                  M   I +  + +A+IAE+VR GL A+P+GQ EA
Sbjct: 221 LPEGMHFDK-----------------LMRALIGVILFQSAYIAEVVRGGLQAIPKGQYEA 263

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A A+GL + +   LV+LPQA++ +IP + + +++L K++SL + +G  DL++
Sbjct: 264 AAAMGLGYWRMMGLVILPQALKLVIPGIVNTFISLFKDTSLVIIIGLFDLLN 315


>gi|90961050|ref|YP_534966.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
 gi|90820244|gb|ABD98883.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
          Length = 485

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L                         T  P F++  I L+  
Sbjct: 331 RGLPLLVLALFIYNGIPSLT-----------------------GTKIPAFIAGIITLTLN 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV +GQMEAA +LGL+  KA + ++LPQ ++ ++P   +Q++  LK
Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G  +L   G  II +  +  ++  I   +YL +  ++    N L  K+
Sbjct: 428 DTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 34/66 (51%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T +L   G+I ATI G ++G   +  NK    I    + +FR +P LV+  F+Y
Sbjct: 284 LNGLWKTIYLTILGIIGATIFGIVIGFLGVIPNKFAQGISTTVIYIFRGLPLLVLALFIY 343

Query: 150 KSVLSV 155
             + S+
Sbjct: 344 NGIPSL 349


>gi|83746553|ref|ZP_00943604.1| Glutamine transport system permease protein glnP [Ralstonia
           solanacearum UW551]
 gi|207743863|ref|YP_002260255.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726884|gb|EAP74011.1| Glutamine transport system permease protein glnP [Ralstonia
           solanacearum UW551]
 gi|206595263|emb|CAQ62190.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 230

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 62/85 (72%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++  AL  +  A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+LPQA+R+++
Sbjct: 94  QFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVILPQALRNML 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           P L +Q ++ +K +SL   +   ++
Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEV 178


>gi|327479740|gb|AEA83050.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas stutzeri DSM 4166]
          Length = 365

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 57/76 (75%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + AA+IAE+VR GL A+P+GQ EAA A+GL + ++T LV+LPQA++ +IP + + ++ L 
Sbjct: 240 FEAAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSTLLVILPQALKLVIPGIVNTFIALF 299

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  D ++
Sbjct: 300 KDTSLVIIIGLFDFLN 315


>gi|322391487|ref|ZP_08064956.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
 gi|321145570|gb|EFX40962.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
          Length = 543

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 71/123 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 406 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVIRNILPATGNEFV 465

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 466 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFILTFTVTRILRYIEKRM 525

Query: 393 ALK 395
            + 
Sbjct: 526 DMD 528


>gi|313885015|ref|ZP_07818767.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619706|gb|EFR31143.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 483

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 23/147 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+ FG+P +  I                N I G           + L   
Sbjct: 329 RGLPLLVLAFFIYFGIPQMTGIKFS-------------NLIAG----------VLTLGLN 365

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEIVR G+ ++ +GQMEA  +LGL+ +   + ++LPQA + ++P   +Q++  LK
Sbjct: 366 AAAYVAEIVRGGVQSIAQGQMEAGRSLGLSRKTTMKKIVLPQAFKIMLPSFINQFVITLK 425

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA 363
           ++S+   +G  +L   G  II +T Q+
Sbjct: 426 DTSILSVIGMVELTQTGRIIIARTYQS 452



 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 19/146 (13%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A++VG   T       +I A I+GTL+G  + S N ++  +  VY+++ R +P LV+ FF
Sbjct: 280 ALMVGLGKTLMATILSLIIAFILGTLLGLMKASHNNILRGVSTVYIDIMRGLPLLVLAFF 339

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y        IP  +     G+  +N  L    LT+  NA  +V   V G V S+   ++
Sbjct: 340 IY------FGIPQMT-----GIKFSN--LIAGVLTLGLNAAAYVAEIVRGGVQSIAQGQM 386

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLP 233
                 + G++L L   +T     LP
Sbjct: 387 ------EAGRSLGLSRKTTMKKIVLP 406


>gi|300811214|ref|ZP_07091721.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497801|gb|EFK32816.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 485

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200
           +V  +  K  +    + D SI+   G+  +N G     L M     I   + + V G++L
Sbjct: 252 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 308

Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +      + +H          + +P++ ++ F+  G+PTL    L ++L          
Sbjct: 309 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 354

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                    P F +  + L     A+I  IVR G  +V  GQ EAA +LGL + KA   V
Sbjct: 355 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 405

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQ  + +IP L +Q++  LK++S+  A+G  DL   G  +I Q  Q  ++ LI   +Y
Sbjct: 406 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQNFQGFKMWLIIAVMY 465

Query: 375 LSLSIMIALFMNRLNAKI 392
           L +  ++    N +  K+
Sbjct: 466 LIIITLLTWLSNYIQKKM 483


>gi|172039038|ref|YP_001805539.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine
           [Cyanothece sp. ATCC 51142]
 gi|171700492|gb|ACB53473.1| amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           [Cyanothece sp. ATCC 51142]
          Length = 391

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 59/84 (70%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + ++AA++AE VR GL +VP+GQ+EAA A+GL       LV+LPQA+R +IP +  Q+++
Sbjct: 271 TLFSAAYLAENVRGGLQSVPKGQIEAAKAVGLNGFFVLILVVLPQALRVVIPTIVGQFIS 330

Query: 334 LLKNSSLAVAVGFADLVSVGGTII 357
           L K++SL   VG  DL+ +  +I+
Sbjct: 331 LFKDTSLLAIVGLVDLLGISQSIL 354


>gi|116514929|ref|YP_813835.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116094244|gb|ABJ59397.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 486

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 34/258 (13%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL 200
           +V  +  K  +    + D SI+   G+  +N G     L M     I   + + V G++L
Sbjct: 253 IVNKYTSKKAVKSQVVADTSIL---GLIKDNAGALLQGLWMTIELSIVGILAALVFGLIL 309

Query: 201 SLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +      + +H          + +P++ ++ F+  G+PTL    L ++L          
Sbjct: 310 GIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFFIYIGMPTL----LGHKL---------- 355

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                    P F +  + L     A+I  IVR G  +V  GQ EAA +LGL + KA   V
Sbjct: 356 ---------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVGQWEAARSLGLPYYKALWKV 406

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQ  + +IP L +Q++  LK++S+  A+G  DL   G  +I Q  Q  ++ LI   +Y
Sbjct: 407 VAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTNLIAQNFQGFKMWLIIAVMY 466

Query: 375 LSLSIMIALFMNRLNAKI 392
           L +  ++    N +  K+
Sbjct: 467 LIIITLLTWLSNYIQKKM 484


>gi|323155720|gb|EFZ41890.1| glutamine transport system permease glnP domain protein
           [Escherichia coli EPECa14]
          Length = 132

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 79/129 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++P
Sbjct: 3   FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLP 62

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      +YL ++++++  +
Sbjct: 63  PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVLYLIITLVLSFIL 122

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 123 RRLERRMKI 131


>gi|225860475|ref|YP_002741984.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229959|ref|ZP_06963640.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254588|ref|ZP_06978174.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|225727474|gb|ACO23325.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390862|gb|EGE89202.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|323467038|gb|ADX70725.1| Glutamine ABC transporter, permease protein [Lactobacillus
           helveticus H10]
          Length = 217

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLIRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  + AA +AEIVRSG+ +V  GQME A + G++
Sbjct: 83  ------------GIVTNPTTASI-AALVIFEAAMLAEIVRSGIGSVDPGQMEGARSNGMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+ ++IP L SQ+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   ++   N L  K
Sbjct: 190 MYVIIAIMYFVVCFCLSTIANYLQKK 215


>gi|283954500|ref|ZP_06372019.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 414]
 gi|283793904|gb|EFC32654.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 414]
          Length = 225

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 21/169 (12%)

Query: 228 LIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           LI G P LV + L Y      L FD        ++ G T+          L+C++AA++A
Sbjct: 72  LIRGTPLLVQVLLIYYIIANNLGFDN------RYVVGVTI----------LACFSAAYLA 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+G++++   Q+E+A ALGL   +    ++ PQA+++I+ PL+ Q+ NL+K+SSL  
Sbjct: 116 EIFRAGILSISISQLESARALGLKEIQICTYIIFPQALKNILAPLSGQFANLIKDSSLLS 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L      + + T   +E  ++    YL L++ I++    L  K
Sbjct: 176 VIAVNELTQNAQEVNSYTFATLEAYVVLAIAYLILTLPISILSRYLERK 224


>gi|257093639|ref|YP_003167280.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046163|gb|ACV35351.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 217

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 111/222 (50%), Gaps = 38/222 (17%)

Query: 188 KIFVFSFVL----GIVLSLFATRLSRHFHEKTG---------KALPLLYISTFLIFGLPT 234
           ++F+ SFVL    G+VL+L   R+SR F   +G         +  PL+    F+ F LP 
Sbjct: 20  QVFLISFVLAVPLGLVLAL--VRISR-FVVLSGLVNGYIWLMRGTPLMLQMLFIYFALPF 76

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + +I ++                      P+F +  +A     AA+ AEI R+G+ ++ R
Sbjct: 77  VPVIGVRL---------------------PDFPAAIVAFVLNYAAYFAEIFRAGIQSIDR 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E A  LGL++ +  R ++LPQ ++ I+PP++++ + L+K++SL   +   DL+    
Sbjct: 116 GQYEGARVLGLSYPQTMRRIVLPQVLKRILPPMSNETITLVKDTSLIYVLAMNDLLRAAR 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I+ +       ++   F YL +++++ L    L  K A+ +
Sbjct: 176 GIVQRDFTTTPFVVAAAF-YLVMTLVLTLGFQHLERKYAVYD 216


>gi|78779549|ref|YP_397661.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           MIT 9312]
 gi|78713048|gb|ABB50225.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Prochlorococcus marinus str. MIT 9312]
          Length = 343

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 40/251 (15%)

Query: 165 LPFGMFLNNRGLSFP----------TLTMDTNAKIFVFSFVLGIVL------SLFATRLS 208
           +P G++L + GL             TLT+   +   +FS  +GI+L      S+F  + S
Sbjct: 112 VPLGIYLLSGGLGLNPVMTRHWGGLTLTILITSCSILFSLPIGILLALCRRSSIFLIQKS 171

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              +    +A+PL+ +   L FG   L+ + L   L  D+                    
Sbjct: 172 SSLYIDVMRAVPLISV---LFFG-QLLIPLFLPVGLEIDR-----------------VWR 210

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA + + +A+IAE ++ GL ++P+ Q+EAA +LGL   +    +L+PQA+R  +P +T
Sbjct: 211 AVIAFTFFVSAYIAEDIKGGLQSIPKNQIEAAKSLGLNKYQINIYILIPQALRVALPAIT 270

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFM 385
           +Q + L +N+SL   +G  +L+ V  +I+      GQ IE+ +    +Y     ++A   
Sbjct: 271 NQLIGLFQNTSLMAILGLMELLGVSRSILANPEFIGQYIEVYIWLASVYWLFCTIMAFVS 330

Query: 386 NRLNAKIALKE 396
            +L  K+ + +
Sbjct: 331 KKLEQKMTINK 341


>gi|15900370|ref|NP_344974.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116516213|ref|YP_815922.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|149023738|ref|ZP_01836218.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|14971923|gb|AAK74614.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116076789|gb|ABJ54509.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|147929675|gb|EDK80667.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|326439679|ref|ZP_08214413.1| ABC transporter permease protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 293

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 5/117 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA+IAE +R+G+ AVPRGQ+EAA +LG +H +A   V++PQA R ++PPLT++
Sbjct: 165 LGLGLVAAAYIAETIRAGIQAVPRGQLEAARSLGFSHARAMVSVIIPQAFRIVVPPLTNE 224

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            + L K+SSL + +G      +L   G  + +Q+  +   IL+    YL +++ + L
Sbjct: 225 LVLLFKDSSLVLFLGVTLEERELTKFGRDLASQSANSTP-ILVAGVCYLLVTVPLGL 280


>gi|326403333|ref|YP_004283414.1| putative amino acid ABC transporter permease [Acidiphilium
           multivorum AIU301]
 gi|325050194|dbj|BAJ80532.1| putative amino acid ABC transporter permease protein [Acidiphilium
           multivorum AIU301]
          Length = 274

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 83/128 (64%), Gaps = 5/128 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + ++++AL    +A++AE +R+G+ AVP+GQ+EAA +LG++  +A R ++L QA+R ++P
Sbjct: 141 YGTVWVALGVVGSAYMAETMRAGIQAVPKGQVEAARSLGMSSAQAMRKIVLMQALRLMVP 200

Query: 326 PLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           PLT++ + L+K+SSL   VG +    DL   G +  N T   I  +++    YL +++ +
Sbjct: 201 PLTNELIMLIKDSSLVFVVGLSAGQFDLTEFGRSTAN-TNVNITPLVVAGLGYLLITLPL 259

Query: 382 ALFMNRLN 389
           ++ + R+ 
Sbjct: 260 SMLVRRME 267


>gi|253574193|ref|ZP_04851535.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251846670|gb|EES74676.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 222

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 74/128 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EIVR+ ++++  GQ EAA +LG+T  +A R ++LPQA R  +P
Sbjct: 90  FPAAVIGFTLSVGAYGSEIVRAAILSIHEGQWEAAYSLGMTRLQALRRIILPQAARVSVP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K++SLA  V + ++      I + T + + +      IYL  S +++   
Sbjct: 150 PLANSFISLVKDTSLAATVTYTEMFRTAQQITSTTYEPLVVYSEAGLIYLIFSTILSALQ 209

Query: 386 NRLNAKIA 393
           NRL  ++ 
Sbjct: 210 NRLEKRLG 217


>gi|210629972|ref|ZP_03296195.1| hypothetical protein COLSTE_00079 [Collinsella stercoris DSM 13279]
 gi|210160723|gb|EEA91694.1| hypothetical protein COLSTE_00079 [Collinsella stercoris DSM 13279]
          Length = 252

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 1/121 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y AA++AE++R+G+ AVPRGQMEAA + G +  +    ++LPQ  + I+PPL +Q
Sbjct: 108 LGVGLYHAAYVAEVIRTGIEAVPRGQMEAAQSQGFSRLQTYAYIVLPQTFKIILPPLCNQ 167

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            LNL+KN+S+   V   DL+      ++  G  ++  +I  F+Y  +   +A+    L  
Sbjct: 168 ALNLVKNTSVLALVAGGDLMYRSDNFVSLYGY-LQGYIICCFMYFLICFPLAMLGQWLER 226

Query: 391 K 391
           +
Sbjct: 227 R 227


>gi|149003550|ref|ZP_01828424.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
 gi|147758486|gb|EDK65485.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145
           T  ++  G I   IIG  +G  R   LS NK       LV WI  VY+E+FR  P +V  
Sbjct: 300 TLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVYIEIFRGTPMIVQS 359

Query: 146 FFLY 149
             +Y
Sbjct: 360 MVIY 363


>gi|118470944|ref|YP_887549.1| amino acid ABC transporter permease [Mycobacterium smegmatis str.
           MC2 155]
 gi|118172231|gb|ABK73127.1| ABC-type amino acid transport system, permease component
           [Mycobacterium smegmatis str. MC2 155]
          Length = 310

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 60/87 (68%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            ++S  F+   + L+   AA++AEI+R+G+ +VP GQMEA+ ALG++   A R  +LPQA
Sbjct: 149 QSLSIPFLLAILGLALNEAAYMAEIIRAGISSVPEGQMEASTALGMSWGLAMRRTVLPQA 208

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           MR IIPP  ++ +++LK +SL  AV F
Sbjct: 209 MRVIIPPTGNEIISMLKTTSLVTAVPF 235



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 10/96 (10%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG +NT  L    M+ A ++G L+   RLS N +   +  VY+ +FR  P  V + F   
Sbjct: 66  VGVLNTLQLTIYSMLIAIVLGVLLAVMRLSPNPVFRSVAWVYLWIFRGTPVYVQLVF--- 122

Query: 151 SVLSVLPIPDHSIVL--PFG---MFLNNRGLSFPTL 181
               +LP    +I L  PFG     LN + LS P L
Sbjct: 123 --WGLLPTIYQNIQLGVPFGPSFFHLNLQSLSIPFL 156


>gi|329298831|ref|ZP_08256167.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 229

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 66/98 (67%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI+R+GL++V  GQ+E   A G++  +A R +++PQAMR+IIPP  +Q ++++K 
Sbjct: 89  AAYMAEIIRAGLLSVDHGQVETTQAFGMSRSRALRRIIIPQAMRAIIPPTGNQLISMIKA 148

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +SL   +   DL+     + N+T + I ++++ +  YL
Sbjct: 149 TSLVSVIAMGDLLYSVQAVYNRTFEIIPMLMVAVIWYL 186


>gi|307704003|ref|ZP_07640937.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
 gi|307622469|gb|EFO01472.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492



 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145
           T  ++  G I   IIG  +G  R   LS NK       LV WI  VY+E+FR  P +V  
Sbjct: 300 TLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEIFRGTPMIVQS 359

Query: 146 FFLY 149
             +Y
Sbjct: 360 MVIY 363


>gi|300703460|ref|YP_003745062.1| amino acid transmembrane ABC transporter protein [Ralstonia
           solanacearum CFBP2957]
 gi|299071123|emb|CBJ42435.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum CFBP2957]
          Length = 230

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 62/85 (72%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F ++  AL  +  A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+LPQA+R+++
Sbjct: 94  QFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVILPQALRNML 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           P L +Q ++ +K +SL   +   ++
Sbjct: 154 PSLVNQLVSTIKETSLGYIISLPEV 178


>gi|294083903|ref|YP_003550660.1| amino acid ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663475|gb|ADE38576.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 298

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F   G   +   F++  + L+ +  A+I EIVR+G+ +VP+GQ EAA A+GL+       
Sbjct: 155 FTLFGDPKLFSNFVAGALCLALFEGAYITEIVRAGIQSVPKGQWEAARAVGLSPLDVLGN 214

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++ PQA+R I+PPL  Q++ L+K+S++   +   +L  +   + + T +  E  +I   +
Sbjct: 215 IIFPQAVRKILPPLAGQFITLIKDSAIVSLISIQELTFLATEVASSTTKVFETWIIVGAM 274

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           Y  +    A     L  K ALK ++
Sbjct: 275 YFIICYSFAALFAHLE-KRALKARR 298



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 30/53 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +L G   T  LAF   I A IIG L+G  R S N  +  I R YVE+ RNIPP
Sbjct: 66  LLKGIATTLRLAFWATIVAAIIGLLMGFMRTSKNLAMRMISRCYVELIRNIPP 118


>gi|269120482|ref|YP_003308659.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614360|gb|ACZ08728.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 239

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 78/133 (58%), Gaps = 4/133 (3%)

Query: 264 PEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           P  MS  IA    +S    A++AEI R G+ A+ +GQMEAA +LGL ++ A R V+LPQA
Sbjct: 105 PTGMSAEIAGVIIISLNAGAYMAEIFRGGIQAIDKGQMEAARSLGLPYKHAMRKVVLPQA 164

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           ++++IP + +Q++  LK++SL   +G  +L   G TI     +  E  LI   +Y  +  
Sbjct: 165 VKNMIPAILNQFIISLKDTSLLTIIGVPELTGNGKTISAANYKYFETYLIIGIMYYVIIK 224

Query: 380 MIALFMNRLNAKI 392
           +++   +++  K+
Sbjct: 225 VLSFVFSKIEEKL 237


>gi|209809239|ref|YP_002264777.1| binding-protein-dependent transport system inner membrane component
           [Aliivibrio salmonicida LFI1238]
 gi|208010801|emb|CAQ81198.1| binding-protein-dependent transport system inner membrane component
           [Aliivibrio salmonicida LFI1238]
          Length = 294

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 66/109 (60%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G +++    +S  + +   +AA+I E+VRSGL A+P+GQ EAA +LGL+     R ++ P
Sbjct: 155 GPASLWENLISGVLCIGMISAAYIGEVVRSGLDAIPKGQHEAARSLGLSTWHRYRYIIAP 214

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           Q  + IIPPL  Q ++L+K+SS+   +   +L  VG  I N +G   EI
Sbjct: 215 QVFKVIIPPLAGQCISLVKDSSIISLISIQELTFVGTEIANSSGMIFEI 263



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 9/71 (12%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
             G +PY  D         G ++T  L F GMI A + GTL+G GR S    +  +   Y
Sbjct: 55  SDGSLPYFFD---------GIISTLRLTFLGMIFAVLFGTLLGLGRRSNITFIRALSNSY 105

Query: 133 VEVFRNIPPLV 143
           +++ RNIPPLV
Sbjct: 106 IQLIRNIPPLV 116


>gi|160935368|ref|ZP_02082750.1| hypothetical protein CLOBOL_00263 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441726|gb|EDP19426.1| hypothetical protein CLOBOL_00263 [Clostridium bolteae ATCC
           BAA-613]
          Length = 224

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 17/211 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           ++++    +F  S   G ++      L  + H K G  +  +Y+   LI   P LV I  
Sbjct: 21  VSLELTLTVFALSLFFGTIVGF----LRYNKHHKAGYRIATVYVE--LIRNTPMLVQI-- 72

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + L+F  P   QF         P   +  + L+    A+IAEIVRSG+ ++P+GQ EAA
Sbjct: 73  -FFLYFGLP---QF-----KIYLPALFAGILGLTINNTAYIAEIVRSGIQSIPKGQWEAA 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LGL        V+ PQA+R+I P L +Q++ +L  +SL   +   DL  V   + +Q 
Sbjct: 124 NCLGLKPIHTFLDVIFPQALRNIFPSLINQFIMILFGTSLLSVLDIKDLTQVASILNSQN 183

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            + +E+    + IY  +S++ +  +  +N +
Sbjct: 184 FRTLELFTFAIGIYYIMSVICSKILRYVNNR 214



 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 13/70 (18%)

Query: 111 GTLVGAGRLSANKLVAW-ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP--- 166
           GT+VG  R + +    + I  VYVE+ RN P LV IFFLY        +P   I LP   
Sbjct: 37  GTIVGFLRYNKHHKAGYRIATVYVELIRNTPMLVQIFFLY------FGLPQFKIYLPALF 90

Query: 167 ---FGMFLNN 173
               G+ +NN
Sbjct: 91  AGILGLTINN 100


>gi|332077738|gb|EGI88199.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|303256728|ref|ZP_07342742.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Burkholderiales bacterium 1_1_47]
 gi|330999370|ref|ZP_08323087.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
 gi|302860219|gb|EFL83296.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Burkholderiales bacterium 1_1_47]
 gi|329575228|gb|EGG56779.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
          Length = 250

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 76/123 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++    A+++E+ R+G+ ++ +GQMEAA ++G+T+ +A   ++LPQA R ++PPL + 
Sbjct: 122 VAITLNAGAYLSEVFRAGIQSLDKGQMEAARSVGMTYWQAMFHIILPQAFRRMLPPLGNN 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +LK+SSL  A+G A+L     T+   T +  E  +    +Y  +++ +A  + ++  
Sbjct: 182 AIAILKDSSLVSAIGLAELAYAARTVAGATARYWEPYITISLMYWVMTLGLAYLVKKMEQ 241

Query: 391 KIA 393
           ++ 
Sbjct: 242 RLG 244


>gi|301300302|ref|ZP_07206510.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852105|gb|EFK79781.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 485

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L                         T  P F++  I L+  
Sbjct: 331 RGLPLLVLALFIYNGIPSLT-----------------------GTKIPAFIAGIITLTLN 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV +GQMEAA +LGL+  KA + ++LPQ ++ ++P   +Q++  LK
Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +G  +L   G  II +  +  ++  I   +YL +  ++    N L  K+
Sbjct: 428 DTSILSIIGILELTQTGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 34/66 (51%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T +L   G+I ATI G ++G   +  NK    I    + +FR +P LV+  F+Y
Sbjct: 284 LNGLWKTIYLTILGIIGATIFGIIIGFLGVIPNKFAQGISTTVIYIFRGLPLLVLALFIY 343

Query: 150 KSVLSV 155
             + S+
Sbjct: 344 NGIPSL 349


>gi|238753376|ref|ZP_04614739.1| Glutamine transport system permease protein glnP [Yersinia ruckeri
           ATCC 29473]
 gi|238708329|gb|EEQ00684.1| Glutamine transport system permease protein glnP [Yersinia ruckeri
           ATCC 29473]
          Length = 204

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 75  FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 134

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  +
Sbjct: 135 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWTAVAVIYLIITLALSFAL 194

Query: 386 NRLNAKIAL 394
            RL  K+ +
Sbjct: 195 RRLERKLKI 203


>gi|327393252|dbj|BAK10674.1| octopine transport system permease protein OccM [Pantoea ananatis
           AJ13355]
          Length = 280

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 81/147 (55%), Gaps = 8/147 (5%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S V P     F    +ALS  TAA+ AEI+R  L+AVP GQ+EA +A G++
Sbjct: 114 LGQFGVIRHSFVWPFLREPFSCAVLALSLCTAAYTAEILRGALLAVPAGQVEAGMACGMS 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T + +E+
Sbjct: 174 RWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEV 233

Query: 367 ILIWMFIYLSLSIMI----ALFMNRLN 389
            L    IYL L+ +I    AL   RL 
Sbjct: 234 FLCAAAIYLILNFIIVQLYALLERRLT 260


>gi|209547422|ref|YP_002279340.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538666|gb|ACI58600.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 516

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 24/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   V+G+ L++     SR         LP   I T +  GLP +V I           +
Sbjct: 45  VLGVVIGMALAVMGISQSRWLR------LPA-RIYTDIFRGLPAIVTIL----------I 87

Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L I ALS    A+I EI RSG+ +V RGQMEA  AL +++ 
Sbjct: 88  IGQGFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 147

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364
           +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      TG   
Sbjct: 148 QGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 207

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++L  +F YL +++ +   +N ++ ++ L ++
Sbjct: 208 PLLLAGLF-YLVITVPLTHLVNYIDVRLRLGKQ 239


>gi|148259697|ref|YP_001233824.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidiphilium cryptum JF-5]
 gi|146401378|gb|ABQ29905.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidiphilium cryptum JF-5]
          Length = 250

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 83/128 (64%), Gaps = 5/128 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + ++++AL    +A++AE +R+G+ AVP+GQ+EAA +LG++  +A R ++L QA+R ++P
Sbjct: 117 YGTVWVALGVVGSAYMAETMRAGIQAVPKGQVEAARSLGMSSAQAMRKIVLMQALRLMVP 176

Query: 326 PLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           PLT++ + L+K+SSL   VG +    DL   G +  N T   I  +++    YL +++ +
Sbjct: 177 PLTNELIMLIKDSSLVFVVGLSAGQFDLTEFGRSTAN-TNVNITPLVVAGLGYLLITLPL 235

Query: 382 ALFMNRLN 389
           ++ + R+ 
Sbjct: 236 SMLVRRME 243


>gi|225620108|ref|YP_002721365.1| ABC-type amino acid transport system, permease [Brachyspira
           hyodysenteriae WA1]
 gi|225214927|gb|ACN83661.1| HisM, ABC-type amino acid transport system, permease component
           [Brachyspira hyodysenteriae WA1]
          Length = 216

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F S  I      +A++ EI R+G+ ++ +GQ EA  AL L++R+    ++LPQA+R +
Sbjct: 85  PAFTSAAITFVLNYSAYLMEIFRAGIESIEKGQYEAGFALNLSYRQIMTRIILPQAVRRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL+++ +NL+K+++L + +G  DL+     I+ +  + +   LI   IYL  + ++  
Sbjct: 145 LPPLSNEAINLIKDTALVIVLGIGDLMLHARQILTRDYKLLP-FLIAAIIYLLFTSILVF 203

Query: 384 FMNRLNAKIALKE 396
              +L  K  ++ 
Sbjct: 204 VFRQLEKKYVIRN 216


>gi|157691141|ref|YP_001485603.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|194015977|ref|ZP_03054592.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
 gi|157679899|gb|ABV61043.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
 gi|194012332|gb|EDW21899.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
          Length = 224

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 21/222 (9%)

Query: 178 FPTLTMDTNAKIF------VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           FPTL       IF      VF+ ++G+V +L         ++        LYIS F    
Sbjct: 13  FPTLIQYLPITIFMAIVSMVFAIIIGVVFALITKNRIPVLYQ-----FAKLYISFFR--A 65

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +PTLV + L   ++F  P L         T      ++ I LS   +A++AEI R+ L +
Sbjct: 66  VPTLVQLFL---IYFGLPQL-----FPAMTSMDALTAVIIGLSIKNSAYLAEIFRAALNS 117

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ+EA +++G+T  ++   ++ PQA+R+ IP   + ++ LLK +SLA  +G A++ +
Sbjct: 118 VDEGQLEACLSVGMTRWQSYVRIIFPQAIRNAIPATGNTFIGLLKETSLAFTIGVAEMFA 177

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I +   +  E  L    +Y  ++I+ +   +    KI+
Sbjct: 178 QGKMIASANYKYFETYLAVGIVYWVMTIIYSFLQDLFERKIS 219


>gi|154687483|ref|YP_001422644.1| YtmL [Bacillus amyloliquefaciens FZB42]
 gi|154353334|gb|ABS75413.1| YtmL [Bacillus amyloliquefaciens FZB42]
          Length = 240

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 19/162 (11%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY---TA 278
           LYIS F   G P +V +   + + +  P L     I  S + P    LY A++ Y   +A
Sbjct: 59  LYISFFR--GTPIMVQL---FIVFYGIPALTALAGIDTSKMDP----LYAAIATYALSSA 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A  AEI+R G+ +V RGQ EAA ++GL   +  R ++LPQA+    P + +  +  LK++
Sbjct: 110 ARAAEIIRGGVNSVDRGQAEAAFSIGLNGGQTFRRIILPQALVQAFPNIGNMVIGFLKDT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           SLA ++G  D+   G T+I  +  ++E       +Y+SLS++
Sbjct: 170 SLAFSIGVMDMSGRGQTLITSSNHSLE-------VYISLSVL 204


>gi|55377278|ref|YP_135128.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Haloarcula marismortui ATCC 43049]
 gi|55230003|gb|AAV45422.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Haloarcula marismortui ATCC 43049]
          Length = 226

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 33/212 (15%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG---KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           F   F  G  + ++ +  +R   E+ G   +  PLL I   L FGL              
Sbjct: 40  FAIGFPAG-AIEVYGSDRARRLVEQVGVVLRGTPLLVIIMILYFGL-------------- 84

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                        S  S  F++  IAL   +AA+ ++I R  L +V  GQ+EAA A+ ++
Sbjct: 85  -------------SVSSSAFVTATIALGLRSAAYQSQIFRGALQSVDDGQLEAARAVAMS 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQAI 364
             +A R V++PQA+R  +P   +++  +LK++S+A+ +G  +L++ G  +    Q+  A+
Sbjct: 132 RFEAIRHVVVPQALRRSVPGFQNEFTIVLKDTSIAIVIGIGELLTTGQNLYEGGQSTAAL 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI L    +Y  L+      ++RL+   A+ E
Sbjct: 192 EIFLAVSLVYFVLTFATNRSLDRLSDYYAVPE 223


>gi|190894983|ref|YP_001985276.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700644|gb|ACE94726.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 222

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/128 (37%), Positives = 73/128 (57%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ Y  A  +E  R+ L ++ R Q++A +ALGL  R     V+LPQA+   IP L S 
Sbjct: 95  ITLTLYMGAITSETFRASLKSIGREQLDACVALGLPQRVQVVNVVLPQAVPRAIPTLLSN 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMN 386
            ++L K S+L  AVG ADL+ VG  I N T + +E++    LI+  I   L+  ++L   
Sbjct: 155 CVSLFKESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEG 214

Query: 387 RLNAKIAL 394
           R+  K+A+
Sbjct: 215 RILKKLAI 222


>gi|168485585|ref|ZP_02710093.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|183571168|gb|EDT91696.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145
           T  ++  G I   IIG  +G  R   LS NK       LV WI  VY+E+FR  P +V  
Sbjct: 300 TLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVYIEIFRGTPMIVQS 359

Query: 146 FFLY 149
             +Y
Sbjct: 360 MVIY 363


>gi|323142442|ref|ZP_08077263.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT
           12067]
 gi|322413087|gb|EFY03985.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT
           12067]
          Length = 214

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 76/134 (56%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F S  +A     AA+  EI R+G+ A+P GQ EAA  LG+ + +  R ++LPQ +R I
Sbjct: 82  PDFESAIVAFVLNYAAYFCEIFRAGIQAIPAGQYEAAHTLGMNYVQTMRRIILPQVIRII 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   DL+     ++ +       I+  +F YL  ++++ L
Sbjct: 142 LPPISNETITLVKDTSLVYVLAMNDLMRTARNLVQRDFSITPFIVAAVF-YLLATLILTL 200

Query: 384 FMNRLNAKIALKEK 397
              RL  + +  ++
Sbjct: 201 VFERLEKRFSRYDQ 214


>gi|297559647|ref|YP_003678621.1| polar amino acid ABC transporter inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296844095|gb|ADH66115.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 224

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 27/165 (16%)

Query: 191 VFSFVLGIVLSLFATRLS--------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +FSFVLG++L+  A R+S           + +  ++ PL  +  F   GL + + IAL  
Sbjct: 27  LFSFVLGVLLT--AMRVSPVPLLRGLATAYVEGIRSTPLTLVLLFCGLGLNSALGIALAD 84

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            + +D                  F    I LS YTA F++E +R+G+  +P GQ+EAA +
Sbjct: 85  SVAWDV-----------------FWWAVIGLSGYTACFVSESLRAGINTIPLGQVEAARS 127

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           LGLT  +  R++++PQA+R+++ PL S  + L+KN+++A   G  
Sbjct: 128 LGLTFTQNLRMIVIPQALRTVVGPLGSVLIALIKNTTVASVAGLG 172


>gi|148988205|ref|ZP_01819668.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|148993994|ref|ZP_01823364.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|148996854|ref|ZP_01824572.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|149006411|ref|ZP_01830123.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|168482691|ref|ZP_02707643.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|168488141|ref|ZP_02712340.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|168492631|ref|ZP_02716774.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|168576830|ref|ZP_02722680.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|169834409|ref|YP_001693956.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|182683418|ref|YP_001835165.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|221231314|ref|YP_002510466.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae ATCC 700669]
 gi|225854025|ref|YP_002735537.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|303255927|ref|ZP_07341957.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|303259526|ref|ZP_07345503.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|303262389|ref|ZP_07348332.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|303264806|ref|ZP_07350723.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|303267362|ref|ZP_07353220.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|303269680|ref|ZP_07355436.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|307067096|ref|YP_003876062.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|307126668|ref|YP_003878699.1| amino acid ABC transporter amino acid-binding protein/permeae
           [Streptococcus pneumoniae 670-6B]
 gi|147757429|gb|EDK64468.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|147762188|gb|EDK69150.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|147926669|gb|EDK77742.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|147927583|gb|EDK78610.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|168996911|gb|ACA37523.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|172043569|gb|EDT51615.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|182628752|gb|ACB89700.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|183573209|gb|EDT93737.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|183576815|gb|EDT97343.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|183577459|gb|EDT97987.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|220673774|emb|CAR68274.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae ATCC 700669]
 gi|225724181|gb|ACO20034.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|301801361|emb|CBW34046.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae INV200]
 gi|302597102|gb|EFL64218.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|302636488|gb|EFL66980.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|302639460|gb|EFL69918.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|302640777|gb|EFL71168.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|302643095|gb|EFL73384.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|302645673|gb|EFL75903.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|306408633|gb|ADM84060.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|306483730|gb|ADM90599.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 670-6B]
 gi|332075296|gb|EGI85766.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332076898|gb|EGI87360.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|15601791|ref|NP_233422.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|121587149|ref|ZP_01676924.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121726619|ref|ZP_01679855.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147672361|ref|YP_001215042.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153817671|ref|ZP_01970338.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153821742|ref|ZP_01974409.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|227812604|ref|YP_002812614.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505827|ref|ZP_04395336.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229510318|ref|ZP_04399798.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229517550|ref|ZP_04406995.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229605360|ref|YP_002876064.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254850199|ref|ZP_05239549.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255746229|ref|ZP_05420176.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262158719|ref|ZP_06029833.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|298499807|ref|ZP_07009613.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9658483|gb|AAF96934.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548588|gb|EAX58640.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121630925|gb|EAX63305.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|126511827|gb|EAZ74421.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126520738|gb|EAZ77961.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|146314744|gb|ABQ19284.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227011746|gb|ACP07957.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227015684|gb|ACP11893.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229345586|gb|EEO10559.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229352763|gb|EEO17703.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229356178|gb|EEO21096.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229371846|gb|ACQ62268.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254845904|gb|EET24318.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255735983|gb|EET91381.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262029599|gb|EEY48249.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|297541788|gb|EFH77839.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 298

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLTLSMLFKQVEKR 291


>gi|325063350|gb|ADY67040.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 252

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 90/167 (53%), Gaps = 11/167 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P+        G+ V P F+ +   L  Y  AF++E+VR+G++
Sbjct: 74  GVPLLMLILWSY---FLVPLWT------GADV-PSFVIMLTTLVIYQGAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+AA ALG ++  A R ++LPQA+ ++IP + S ++  +K+++L   +   DL 
Sbjct: 124 ALGAGQMDAARALGHSYLGAMRFIILPQALYNMIPSMISTFVATIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                + NQ   Q  ++ LI   +Y ++   +    N +  +IA + 
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAVVYYAICWSLTYLANAVERRIAKRR 230


>gi|311898730|dbj|BAJ31138.1| putative glutamate ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 275

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 40/202 (19%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALKY 242
           V S VLG++L++   RLS H   +          +A+PLL     +IF L T V  A   
Sbjct: 82  VGSLVLGVLLAV--GRLSDHRPVRVACTAVVQFFRAMPLL----IMIFALYTAVFTA--- 132

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                +P                  +L + LS Y  A  AEI+RSG+ AVPRGQ EA  A
Sbjct: 133 -----QP----------------LWALVLGLSVYNGAVQAEIIRSGINAVPRGQGEAGYA 171

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTG 361
           LGL   +   LVLLPQ++R+++P +  Q +  LK++SL   + + +L+ VG  I  N  G
Sbjct: 172 LGLRKTQVMTLVLLPQSVRAMLPAIIGQLVVTLKDTSLGYIITYPELLFVGRWIASNSDG 231

Query: 362 QA-IEIILIWMFIYLSLSIMIA 382
              I +IL+   +Y+++ + ++
Sbjct: 232 YPYIPVILVITPLYIAMCLALS 253



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 34/56 (60%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           G + + ++G L+  GRLS ++ V   C   V+ FR +P L++IF LY +V +  P+
Sbjct: 80  GAVGSLVLGVLLAVGRLSDHRPVRVACTAVVQFFRAMPLLIMIFALYTAVFTAQPL 135


>gi|241895264|ref|ZP_04782560.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871570|gb|EER75321.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 493

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 77/132 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IA+   +AA++AEI+RSG+ AVP GQ EAA +LG T  +  R ++LPQA+++I+P
Sbjct: 359 FLAGAIAMFLNSAAYVAEIIRSGIQAVPTGQTEAARSLGFTKNQTMRYMILPQAIKNILP 418

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++++ ++K  S+   +G  +L      +   + +    ++I   IY  L+  I+  +
Sbjct: 419 ALGNEFVTVIKEGSVVSVIGVGELTFQTSVVQGASFKPFIPLIITAAIYFILTFGISRLL 478

Query: 386 NRLNAKIALKEK 397
           N    K+   +K
Sbjct: 479 NLFEKKLRKSDK 490



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S YA   + G + T  LA  G+    I+G L    +LS+ K   W+   Y+E  R +P L
Sbjct: 280 SKYAPYFVKGTLYTIGLAVIGVFFGIILGILFALMKLSSIKPFKWLASAYIEAVRGVPLL 339

Query: 143 VVIFFLY 149
           + +F +Y
Sbjct: 340 IQVFIVY 346


>gi|223933890|ref|ZP_03625854.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|253751333|ref|YP_003024474.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|253753234|ref|YP_003026374.1| amino acid ABC transporter permease protein [Streptococcus suis
           P1/7]
 gi|253755057|ref|YP_003028197.1| amino acid ABC transporter permease protein [Streptococcus suis
           BM407]
 gi|330832340|ref|YP_004401165.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|223897448|gb|EEF63845.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|251815622|emb|CAZ51208.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251817521|emb|CAZ55265.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251819479|emb|CAR45008.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|292557906|gb|ADE30907.1| permease protein [Streptococcus suis GZ1]
 gi|319757618|gb|ADV69560.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis JS14]
 gi|329306563|gb|AEB80979.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 229

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 94/167 (56%), Gaps = 13/167 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250
           F  +LG++L+ FA R        T        I  ++  G P +V I + + + HF  P 
Sbjct: 30  FGSILGVLLA-FAQRSKYKVLAWTAN------IYVWIFRGTPMIVQIMIAFAMTHFVAPT 82

Query: 251 LGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                 +G  TV     +   I +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  ++
Sbjct: 83  FQ----LGILTVDLTRLIPGIIVISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKQ 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           A R V++PQA+++I+P L ++++ ++K+SSL   +G  +L +   T+
Sbjct: 139 AMRYVIMPQAIKNILPALGNEFVTIVKDSSLLSTIGVMELWNGAQTV 185


>gi|254456396|ref|ZP_05069825.1| amino acid ABC transporter, permease protein [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207083398|gb|EDZ60824.1| amino acid ABC transporter, permease protein [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 480

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+S + AA++AE++R GL A+PRGQ +AA +LG+ + K   LV+LPQA++ +IP + + 
Sbjct: 352 IAISLFEAAYVAEVIRGGLQALPRGQYDAAKSLGMGYWKMHILVILPQALKLVIPGIANT 411

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           +L L+K++ L   VG  ++V +
Sbjct: 412 FLALVKDTPLIFVVGLLEIVGM 433


>gi|145301209|ref|YP_001144050.1| ABC-type polar amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142853981|gb|ABO92302.1| ABC-type polar amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 222

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 15/176 (8%)

Query: 178 FPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           FP L   + T  ++ ++ FVL +VLSL    + R F       L +LYIS F   G P L
Sbjct: 13  FPILLKYLGTTMEMALWGFVLALVLSL-TLAIVRVFRIPVIHWLAMLYISFFR--GTPLL 69

Query: 236 V-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V L  L Y L    PV     F+G       F +  + L+ + AA++AE +R+ ++ + +
Sbjct: 70  VQLFLLYYGLPQLFPV-----FVGMDA----FTAAIVGLTLHFAAYMAESIRAAILGIHK 120

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            QMEAA+++G++  +A R ++LPQA R   P L + +++++K++SLA  +G A+++
Sbjct: 121 SQMEAALSIGMSRYQAMRRIILPQAARIATPSLMNYFIDMIKSTSLAFTLGVAEIM 176


>gi|123443061|ref|YP_001007035.1| glutamine ABC transporter permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122090022|emb|CAL12880.1| putative glutamine transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 218

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 89  FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  +
Sbjct: 149 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 208

Query: 386 NRLNAKIAL 394
            RL  K+ +
Sbjct: 209 RRLERKLKI 217


>gi|322377150|ref|ZP_08051642.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M334]
 gi|321281863|gb|EFX58871.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M334]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|307708017|ref|ZP_07644487.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
 gi|307615935|gb|EFN95138.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
          Length = 490

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 353 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 412

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 413 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 461


>gi|291458315|ref|ZP_06597705.1| ABC transporter, permease protein, polar amino acid uptake family
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418848|gb|EFE92567.1| ABC transporter, permease protein, polar amino acid uptake family
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 262

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 30/218 (13%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           +P ++      +F   + L ++  +FA         KT   L +  I+ F    L  ++ 
Sbjct: 32  YPGISAGKRRSMFDIHYFLEVLPKVFA---------KTPVTLEIALIAAFFSLLLGMIIA 82

Query: 238 IALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTA------------------ 278
           +   Y+L    P    F +F+ G+ +  +    Y  ++ Y+A                  
Sbjct: 83  VIAYYRLPLLYPAARAFVSFMRGTPIVAQLYFFYFGVAVYSALVRDMTPVTAVSLVLSLN 142

Query: 279 --AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             AF++E +R+ L++V  GQ EAA++LG+++ +  R +++PQA+R  +PPL + ++NL+K
Sbjct: 143 VGAFMSESIRAALLSVDDGQREAALSLGMSNLQIVRRIIIPQALRVALPPLFNDFINLIK 202

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            SSLA  +G  D++    T  ++T +  EI    M +Y
Sbjct: 203 ASSLAFMLGVPDIMGAARTEGSRTYRYFEIYGAVMVVY 240


>gi|229492701|ref|ZP_04386502.1| ABC-type amino acid transport system, permease component
           [Rhodococcus erythropolis SK121]
 gi|229320360|gb|EEN86180.1| ABC-type amino acid transport system, permease component
           [Rhodococcus erythropolis SK121]
          Length = 318

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 76/131 (58%), Gaps = 1/131 (0%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P + QF       +   F+   I L+   AA++AEIVR+G+ +V  GQ EA++ALG+T  
Sbjct: 136 PFVHQFVHFDMQDLQAAFLFAVIGLALNEAAYMAEIVRAGIASVNEGQTEASVALGMTWG 195

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEII 367
           +  R  +LPQAMR IIPP  ++ ++LLK +SL  AV  + +L      I     + I ++
Sbjct: 196 QTMRRTVLPQAMRVIIPPTGNELISLLKTTSLVTAVPLSTELYGRARDISGANFEPIPLL 255

Query: 368 LIWMFIYLSLS 378
           ++ +  YL+++
Sbjct: 256 MVAVTWYLAMT 266


>gi|90962595|ref|YP_536511.1| amino acid ABC transporter permease [Lactobacillus salivarius
           UCC118]
 gi|90821789|gb|ABE00428.1| Amino acid ABC transporter, permease protein [Lactobacillus
           salivarius UCC118]
          Length = 231

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 94/183 (51%), Gaps = 30/183 (16%)

Query: 191 VFSFVLGIVLSLFAT--RLSR------------HFHEKTGKALPLLYISTFLIFGLPTLV 236
           + SF+LG++L+L     R+S+             F+    ++ PLL     + FGLP L 
Sbjct: 25  IVSFILGLILALVTALIRISQTKGPFLVIKAIFRFYVWLFRSTPLLVQLFIVYFGLPYLK 84

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +  L  +               G  + P F S  I  S  T A+ +E +R+ + ++P+GQ
Sbjct: 85  IKGLAPE---------------GIKLDP-FTSGIIVFSLNTGAYASETIRAAITSIPKGQ 128

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ++G+TH++A   +++PQA R  +PPL + ++ L+K++SLA ++   ++  V   I
Sbjct: 129 WEAAASIGMTHKQALMRIIIPQAARVSLPPLANSFIGLVKDTSLAASITIVEMFEVSQQI 188

Query: 357 INQ 359
             +
Sbjct: 189 AAE 191


>gi|330718659|ref|ZP_08313259.1| amino acid ABC transporter [Leuconostoc fallax KCTC 3537]
          Length = 414

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 102/187 (54%), Gaps = 18/187 (9%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG VL+L   +LSR F     KA+  +Y+    + G P LV     + + F   V+G  N
Sbjct: 231 LGTVLALM--KLSRAF---ILKAIANIYVE--YVRGTPLLVQA---FMVFFGTQVIG-LN 279

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                     F +  +A+   +AA++ EI+RSG+ +V  GQMEAA +LGL++ K  R V+
Sbjct: 280 L-------SAFAAGALAMGLNSAAYVTEIIRSGINSVSAGQMEAARSLGLSNGKTMRYVI 332

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+++I+P L ++++ ++K  S+   +G  +L+   G I   + +    +LI   IY 
Sbjct: 333 LPQAVKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTGVIQGASFKPFFPLLITSVIYF 392

Query: 376 SLSIMIA 382
            L+  I+
Sbjct: 393 VLTFSIS 399


>gi|328552037|gb|AEB22529.1| YxeN [Bacillus amyloliquefaciens TA208]
          Length = 224

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TL M   A   VF+ + G++L+L         H+     L  +YIS F   G+PTLV + 
Sbjct: 23  TLVMAVAA--MVFAVIGGLILALITKNRIPVLHQ-----LSKVYISFFR--GVPTLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L Y   +  P L    F G S ++    +  I LS   AA++AEI R+ L +V  GQ+EA
Sbjct: 74  LIY---YGLPQL----FPGMSKMT-ALTAAIIGLSLKNAAYLAEIFRAALNSVDEGQLEA 125

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +++G+T  +A R ++ PQA+R+ +P   + ++ LLK +SLA  +G  ++ + G    + 
Sbjct: 126 CLSVGMTKSQAYRRIIFPQAIRNALPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASG 185

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +  E  L    +Y  L+I+ ++  + L   I+
Sbjct: 186 NLKYFETYLAVAIMYWILTIIYSVLQDLLERAIS 219


>gi|323496925|ref|ZP_08101953.1| amino acid ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
 gi|323317999|gb|EGA70982.1| amino acid ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
          Length = 223

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+      +FS +L ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMATWGLIFSLILSVILANI-----RVFKVPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F ++ G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQI--FPWLVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|194446396|ref|YP_002041217.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194405059|gb|ACF65281.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 222

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRVILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|123441155|ref|YP_001005143.1| ABC transporter, inner-membrane component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088116|emb|CAL10904.1| ABC transporter, inner-membrane component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 219

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 95/176 (53%), Gaps = 18/176 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F +G+V+ L  +      H + G+    +YIS F   G P L  + L + L  +   
Sbjct: 31  VAGFFIGVVIYLMESG-----HSRLGRGFARIYISLFR--GTPVLAQVLLCFYLPGE--- 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +G S   P +++  +AL+  TAA+ ++I+RSG  A+P GQ+EAA   GL+ R+A
Sbjct: 81  ------LGLSL--PGYLAAVLALTLNTAAYQSQILRSGFNAIPPGQLEAAAMCGLSPRQA 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              + +PQ +R  +P L S+ ++++K S++   +   DL+ VG  + + T + +E+
Sbjct: 133 LWHIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 188


>gi|226323073|ref|ZP_03798591.1| hypothetical protein COPCOM_00845 [Coprococcus comes ATCC 27758]
 gi|225208640|gb|EEG90994.1| hypothetical protein COPCOM_00845 [Coprococcus comes ATCC 27758]
          Length = 229

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 106/196 (54%), Gaps = 25/196 (12%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLVLIALKYQLHFDK 248
           ++G+VL  F   + R  ++KTGK L LL      YI+  +I G P +V + + Y      
Sbjct: 37  LIGVVLG-FLLAIVRSTYDKTGK-LKLLNLICQIYIT--VIRGTPVVVQLLIIY------ 86

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F       VS   +++ +A    ++A++AEI RSG++AV  GQ EA  +LG  +R
Sbjct: 87  -----FVIFASVDVSKTIVAI-LAFGMNSSAYVAEIFRSGIMAVDNGQFEAGRSLGFNYR 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    +++PQA ++++P L ++++ LLK +S+A  +   DL   G  I ++T  A+  ++
Sbjct: 141 QTMIYIIMPQAFKNVLPALGNEFIVLLKETSVAGYIALQDLTKGGDIIRSRTYDALMPLM 200

Query: 369 IWMFIYLSLSIMIALF 384
               IYL   +M+ +F
Sbjct: 201 AVAIIYL---VMVMIF 213


>gi|200390875|ref|ZP_03217486.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199603320|gb|EDZ01866.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 222

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +        P+L+++ F I       LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLW--------PVLWLARFYISIFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVLWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|323186798|gb|EFZ72118.1| L-cystine transport system permease protein tcyB [Escherichia coli
           RN587/1]
          Length = 222

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|167625395|ref|YP_001675689.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           halifaxensis HAW-EB4]
 gi|167355417|gb|ABZ78030.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella halifaxensis HAW-EB4]
          Length = 226

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 75/122 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQMEAA +LGL+     + V+LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQMEAARSLGLSQAATMKEVILPQAIKNILPSLGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK +++   +G  DL+  G  I ++T +    +     IYL L+ +    ++R   
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLLLTYIFTFILSRFET 220

Query: 391 KI 392
           ++
Sbjct: 221 RL 222


>gi|293567831|ref|ZP_06679172.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1071]
 gi|291589416|gb|EFF21223.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1071]
          Length = 530

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222
           MFL   GL+     + T     V    LG+++ +F         L+R F +K G AL  +
Sbjct: 300 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 353

Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           Y+  F   G P +V        +AL + +  ++ +                 +L+I +S 
Sbjct: 354 YVEVFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 394

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++ EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +
Sbjct: 395 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 454

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++++   +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 455 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511


>gi|258615113|ref|ZP_05712883.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium DO]
 gi|289565909|ref|ZP_06446349.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|293556866|ref|ZP_06675427.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1039]
 gi|293563614|ref|ZP_06678058.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1162]
 gi|294614606|ref|ZP_06694510.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1636]
 gi|294621215|ref|ZP_06700400.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium U0317]
 gi|314938843|ref|ZP_07846114.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943648|ref|ZP_07850402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314949084|ref|ZP_07852444.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314952177|ref|ZP_07855195.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314991849|ref|ZP_07857306.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996560|ref|ZP_07861597.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|289162282|gb|EFD10142.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|291592508|gb|EFF24113.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1636]
 gi|291599211|gb|EFF30243.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium U0317]
 gi|291600950|gb|EFF31241.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1039]
 gi|291604414|gb|EFF33904.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1162]
 gi|313589301|gb|EFR68146.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593554|gb|EFR72399.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313595709|gb|EFR74554.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597685|gb|EFR76530.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313641854|gb|EFS06434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313644500|gb|EFS09080.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 530

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222
           MFL   GL+     + T     V    LG+++ +F         L+R F +K G AL  +
Sbjct: 300 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 353

Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           Y+  F   G P +V        +AL + +  ++ +                 +L+I +S 
Sbjct: 354 YVEVFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 394

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++ EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +
Sbjct: 395 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 454

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++++   +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 455 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511


>gi|170769381|ref|ZP_02903834.1| L-cystine ABC transporter, permease protein [Escherichia albertii
           TW07627]
 gi|170121705|gb|EDS90636.1| L-cystine ABC transporter, permease protein [Escherichia albertii
           TW07627]
          Length = 222

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPVWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPVWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|296110461|ref|YP_003620842.1| amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU
           11154]
 gi|295831992|gb|ADG39873.1| amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU
           11154]
          Length = 491

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 78/128 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +A+   +AA++AEI+RSG+ +V  GQ EAA +LGL+  KA R ++LPQA+++I+P
Sbjct: 360 FAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLSKGKAMRYIILPQAVKNILP 419

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++++ ++K  S+   +G  +L+   G +   + +    +LI  FIY  L+  I+  +
Sbjct: 420 ALGNEFVTIIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLLITSFIYFVLTFGISRAL 479

Query: 386 NRLNAKIA 393
                ++A
Sbjct: 480 GYAEKRMA 487


>gi|302525505|ref|ZP_07277847.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
 gi|302434400|gb|EFL06216.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
          Length = 294

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 38/174 (21%)

Query: 191 VFSFVLGIVLSLF------ATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLV 236
           V +F LG VL++       A RLS H        F  +  +A+PLL +     +GLPTL 
Sbjct: 70  VKAFALGAVLAIVFGAVFAAGRLSDHAWVRGVCTFVVEFFRAIPLLILMFLFYYGLPTL- 128

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                                 G   SP F ++ + L+ Y  + +AE+ R+G++A+P+GQ
Sbjct: 129 ----------------------GVDTSPLF-AVVLGLTLYNGSVLAEVFRAGILALPKGQ 165

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            EAA ALG+   +    VLLPQA+R+++P + SQ + LLK+++L   V + +L+
Sbjct: 166 SEAAYALGMRKTQVMFTVLLPQALRAMLPTIISQLVVLLKDTALGFLVTYPELL 219



 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV--LSVLPIPD 160
           G + A + G +  AGRLS +  V  +C   VE FR IP L+++F  Y  +  L V   P 
Sbjct: 76  GAVLAIVFGAVFAAGRLSDHAWVRGVCTFVVEFFRAIPLLILMFLFYYGLPTLGVDTSPL 135

Query: 161 HSIVLPFGMFLNN 173
            ++VL  G+ L N
Sbjct: 136 FAVVL--GLTLYN 146


>gi|16129865|ref|NP_416428.1| inner membrane protein, predicted transporter subunit: membrane
           component of ABC superfamily [Escherichia coli str. K-12
           substr. MG1655]
 gi|24113295|ref|NP_707805.1| putative transport system permease protein (former yecC) [Shigella
           flexneri 2a str. 301]
 gi|26248184|ref|NP_754224.1| amino-acid ABC transporter permease YecS [Escherichia coli CFT073]
 gi|30063362|ref|NP_837533.1| putative transport system permease protein (former yecC) [Shigella
           flexneri 2a str. 2457T]
 gi|74311736|ref|YP_310155.1| putative transport system permease [Shigella sonnei Ss046]
 gi|89108753|ref|AP_002533.1| predicted transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91211137|ref|YP_541123.1| putative transport system permease [Escherichia coli UTI89]
 gi|110805891|ref|YP_689411.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|117624060|ref|YP_852973.1| putative transport system permease protein [Escherichia coli APEC
           O1]
 gi|157161390|ref|YP_001458708.1| L-cystine ABC transporter, permease protein [Escherichia coli HS]
 gi|170019744|ref|YP_001724698.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170081566|ref|YP_001730886.1| ABC transporter membrane protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|170681367|ref|YP_001743325.1| L-cystine ABC transporter permease [Escherichia coli SMS-3-5]
 gi|188494690|ref|ZP_03001960.1| L-cystine ABC transporter, permease protein [Escherichia coli
           53638]
 gi|191168290|ref|ZP_03030083.1| L-cystine ABC transporter, permease protein [Escherichia coli B7A]
 gi|191173310|ref|ZP_03034840.1| L-cystine ABC transporter, permease protein [Escherichia coli F11]
 gi|193071132|ref|ZP_03052056.1| L-cystine ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194434972|ref|ZP_03067215.1| L-cystine ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194439561|ref|ZP_03071634.1| L-cystine ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|209919340|ref|YP_002293424.1| putative amino acid ABC transporter permease [Escherichia coli
           SE11]
 gi|218554502|ref|YP_002387415.1| putative ABC transporter permease [Escherichia coli IAI1]
 gi|218558776|ref|YP_002391689.1| transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli S88]
 gi|218689911|ref|YP_002398123.1| putative ABC transporter permease [Escherichia coli ED1a]
 gi|218695525|ref|YP_002403192.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli 55989]
 gi|218699518|ref|YP_002407147.1| putative ABC transporter permease [Escherichia coli IAI39]
 gi|218705413|ref|YP_002412932.1| putative ABC transporter permease [Escherichia coli UMN026]
 gi|227885655|ref|ZP_04003460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Escherichia coli 83972]
 gi|237705874|ref|ZP_04536355.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238901127|ref|YP_002926923.1| putative transporter subunit: membrane component of ABC superfamily
           [Escherichia coli BW2952]
 gi|253773129|ref|YP_003035960.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|256017884|ref|ZP_05431749.1| polar amino acid ABC transporter, inner membrane subunit [Shigella
           sp. D9]
 gi|256022424|ref|ZP_05436289.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia sp. 4_1_40B]
 gi|260855898|ref|YP_003229789.1| putative transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|260868510|ref|YP_003234912.1| putative transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|293405404|ref|ZP_06649396.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli FVEC1412]
 gi|293410277|ref|ZP_06653853.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B354]
 gi|293415229|ref|ZP_06657872.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B185]
 gi|293446300|ref|ZP_06662722.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B088]
 gi|298381048|ref|ZP_06990647.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli FVEC1302]
 gi|300818658|ref|ZP_07098866.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300822310|ref|ZP_07102451.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300899172|ref|ZP_07117450.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300904805|ref|ZP_07122632.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300917360|ref|ZP_07134029.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300925011|ref|ZP_07140934.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300928949|ref|ZP_07144453.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300935894|ref|ZP_07150850.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300951542|ref|ZP_07165376.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300956566|ref|ZP_07168847.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300982287|ref|ZP_07175997.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300993931|ref|ZP_07180606.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301029370|ref|ZP_07192466.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301305259|ref|ZP_07211356.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301327708|ref|ZP_07220914.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|306814258|ref|ZP_07448424.1| putative transporter subunit [Escherichia coli NC101]
 gi|307314175|ref|ZP_07593785.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309795972|ref|ZP_07690385.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331647511|ref|ZP_08348603.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli M605]
 gi|331653325|ref|ZP_08354330.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli M718]
 gi|331657963|ref|ZP_08358925.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA206]
 gi|331663416|ref|ZP_08364326.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA143]
 gi|331668612|ref|ZP_08369460.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA271]
 gi|331673436|ref|ZP_08374204.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA280]
 gi|331677803|ref|ZP_08378478.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H591]
 gi|331683470|ref|ZP_08384071.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H299]
 gi|84027923|sp|P0AFT3|YECS_ECOL6 RecName: Full=Inner membrane amino-acid ABC transporter permease
           protein yecS
 gi|84027924|sp|P0AFT2|YECS_ECOLI RecName: Full=Inner membrane amino-acid ABC transporter permease
           protein yecS
 gi|84027925|sp|P0AFT4|YECS_SHIFL RecName: Full=Inner membrane amino-acid ABC transporter permease
           protein yecS
 gi|26108588|gb|AAN80791.1|AE016762_44 Hypothetical amino-acid ABC transporter permease protein yecS
           [Escherichia coli CFT073]
 gi|1736577|dbj|BAA15738.1| predicted transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1788226|gb|AAC74985.1| inner membrane protein, predicted transporter subunit: membrane
           component of ABC superfamily [Escherichia coli str. K-12
           substr. MG1655]
 gi|24052302|gb|AAN43512.1| putative transport system permease protein (former yecC) [Shigella
           flexneri 2a str. 301]
 gi|30041614|gb|AAP17342.1| putative transport system permease protein (former yecC) [Shigella
           flexneri 2a str. 2457T]
 gi|73855213|gb|AAZ87920.1| putative transport system permease protein (former yecC) [Shigella
           sonnei Ss046]
 gi|91072711|gb|ABE07592.1| putative transport system permease protein [Escherichia coli UTI89]
 gi|110615439|gb|ABF04106.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|115513184|gb|ABJ01259.1| putative transport system permease protein [Escherichia coli APEC
           O1]
 gi|157067070|gb|ABV06325.1| L-cystine ABC transporter, permease protein [Escherichia coli HS]
 gi|169754672|gb|ACA77371.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169889401|gb|ACB03108.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|170519085|gb|ACB17263.1| L-cystine ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|188489889|gb|EDU64992.1| L-cystine ABC transporter, permease protein [Escherichia coli
           53638]
 gi|190901662|gb|EDV61418.1| L-cystine ABC transporter, permease protein [Escherichia coli B7A]
 gi|190906427|gb|EDV66036.1| L-cystine ABC transporter, permease protein [Escherichia coli F11]
 gi|192955527|gb|EDV86006.1| L-cystine ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194416807|gb|EDX32933.1| L-cystine ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194421470|gb|EDX37484.1| L-cystine ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|209912599|dbj|BAG77673.1| putative amino acid ABC transporter permease component [Escherichia
           coli SE11]
 gi|218352257|emb|CAU98013.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli 55989]
 gi|218361270|emb|CAQ98854.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli IAI1]
 gi|218365545|emb|CAR03272.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli S88]
 gi|218369504|emb|CAR17271.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli IAI39]
 gi|218427475|emb|CAR08249.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli ED1a]
 gi|218432510|emb|CAR13403.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli UMN026]
 gi|222033659|emb|CAP76400.1| Inner membrane amino-acid ABC transporter permease [Escherichia
           coli LF82]
 gi|226900631|gb|EEH86890.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227837228|gb|EEJ47694.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Escherichia coli 83972]
 gi|238863239|gb|ACR65237.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|253324173|gb|ACT28775.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|257754547|dbj|BAI26049.1| predicted transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|257764866|dbj|BAI36361.1| predicted transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|260448965|gb|ACX39387.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281178980|dbj|BAI55310.1| putative amino acid ABC transporter permease component [Escherichia
           coli SE15]
 gi|281601360|gb|ADA74344.1| putative transport system permease protein [Shigella flexneri
           2002017]
 gi|284921831|emb|CBG34904.1| putative cystine ABC transporter, permease protein [Escherichia
           coli 042]
 gi|291323130|gb|EFE62558.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B088]
 gi|291427612|gb|EFF00639.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli FVEC1412]
 gi|291432877|gb|EFF05856.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B185]
 gi|291470745|gb|EFF13229.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B354]
 gi|294489589|gb|ADE88345.1| L-cystine ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|298278490|gb|EFI20004.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli FVEC1302]
 gi|299877725|gb|EFI85936.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300307264|gb|EFJ61784.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300316629|gb|EFJ66413.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300357209|gb|EFJ73079.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300403273|gb|EFJ86811.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300406432|gb|EFJ89970.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300415406|gb|EFJ98716.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300418830|gb|EFK02141.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300449217|gb|EFK12837.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300458913|gb|EFK22406.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300463103|gb|EFK26596.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300525193|gb|EFK46262.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300528830|gb|EFK49892.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300839465|gb|EFK67225.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300845752|gb|EFK73512.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|305852417|gb|EFM52868.1| putative transporter subunit [Escherichia coli NC101]
 gi|306906144|gb|EFN36662.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307553932|gb|ADN46707.1| putative amino acid transport protein ABC superfamily [Escherichia
           coli ABU 83972]
 gi|307626605|gb|ADN70909.1| putative transporter subunit [Escherichia coli UM146]
 gi|308120422|gb|EFO57684.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|309702213|emb|CBJ01529.1| putative cystine ABC transporter, permease protein [Escherichia
           coli ETEC H10407]
 gi|312946510|gb|ADR27337.1| putative transporter subunit [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313650135|gb|EFS14548.1| L-cystine transport system permease protein tcyB [Shigella flexneri
           2a str. 2457T]
 gi|315061218|gb|ADT75545.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|315136555|dbj|BAJ43714.1| inner membrane amino-acid ABC transporter permease [Escherichia
           coli DH1]
 gi|315257251|gb|EFU37219.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315286628|gb|EFU46061.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315290284|gb|EFU49662.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315296501|gb|EFU55798.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|315617859|gb|EFU98457.1| L-cystine transport system permease protein tcyB [Escherichia coli
           3431]
 gi|320176078|gb|EFW51146.1| Cystine ABC transporter, permease protein [Shigella dysenteriae CDC
           74-1112]
 gi|320178180|gb|EFW53157.1| Cystine ABC transporter, permease protein [Shigella boydii ATCC
           9905]
 gi|320194370|gb|EFW69001.1| Cystine ABC transporter, permease protein [Escherichia coli
           WV_060327]
 gi|320198612|gb|EFW73212.1| Cystine ABC transporter, permease protein [Escherichia coli
           EC4100B]
 gi|323152749|gb|EFZ39021.1| L-cystine transport system permease protein tcyB [Escherichia coli
           EPECa14]
 gi|323165286|gb|EFZ51074.1| L-cystine transport system permease protein tcyB [Shigella sonnei
           53G]
 gi|323180831|gb|EFZ66371.1| L-cystine transport system permease protein tcyB [Escherichia coli
           1180]
 gi|323186306|gb|EFZ71656.1| L-cystine transport system permease protein tcyB [Escherichia coli
           1357]
 gi|323378205|gb|ADX50473.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323937193|gb|EGB33473.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1520]
 gi|323940419|gb|EGB36610.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E482]
 gi|323948201|gb|EGB44189.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H120]
 gi|323952413|gb|EGB48286.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H252]
 gi|323956315|gb|EGB52058.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H263]
 gi|323961967|gb|EGB57566.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H489]
 gi|323968335|gb|EGB63742.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli M863]
 gi|323972719|gb|EGB67920.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TA007]
 gi|323977901|gb|EGB72987.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TW10509]
 gi|324007277|gb|EGB76496.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324013510|gb|EGB82729.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|324017954|gb|EGB87173.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324118972|gb|EGC12861.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1167]
 gi|327253049|gb|EGE64703.1| L-cystine transport system permease protein tcyB [Escherichia coli
           STEC_7v]
 gi|330911726|gb|EGH40236.1| cystine ABC transporter, permease protein [Escherichia coli AA86]
 gi|331043235|gb|EGI15373.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli M605]
 gi|331049423|gb|EGI21495.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli M718]
 gi|331056211|gb|EGI28220.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA206]
 gi|331059215|gb|EGI31192.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA143]
 gi|331063806|gb|EGI35717.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA271]
 gi|331069634|gb|EGI41021.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA280]
 gi|331074263|gb|EGI45583.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H591]
 gi|331079685|gb|EGI50882.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H299]
 gi|332089652|gb|EGI94754.1| L-cystine transport system permease protein tcyB [Shigella boydii
           5216-82]
 gi|332095438|gb|EGJ00459.1| L-cystine transport system permease protein tcyB [Shigella
           dysenteriae 155-74]
 gi|332101263|gb|EGJ04609.1| L-cystine ABC transporter [Shigella sp. D9]
          Length = 222

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|330718493|ref|ZP_08313093.1| ABC-type amino acid transport system, permease component
           [Leuconostoc fallax KCTC 3537]
          Length = 211

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 2/129 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  + L+ YT+AFIAE VR+G+ ++  GQME A A GL++ +A   ++LPQA    +P
Sbjct: 84  FWSGTLGLTLYTSAFIAETVRAGIQSIDSGQMEGARANGLSYGQAMSRIILPQAFVVALP 143

Query: 326 PLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            L +Q++NL+KNSS LA   GF D++     I           ++   +YL +++ ++ +
Sbjct: 144 SLANQFINLVKNSSILAFVAGF-DIMYQANVIAGLNFDPFNTYIVAGILYLIITLPLSYY 202

Query: 385 MNRLNAKIA 393
           M  L  K A
Sbjct: 203 MQHLEKKSA 211



 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 33/63 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           +  L GF  T   +   ++ + I+GTL     +  NK ++     YVE+FRNIP LV+  
Sbjct: 10  STFLSGFGYTLLASLIALVGSMILGTLFAILEILPNKALSIFGHTYVEIFRNIPLLVITM 69

Query: 147 FLY 149
           F Y
Sbjct: 70  FFY 72


>gi|298502248|ref|YP_003724188.1| amino acid ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|298237843|gb|ADI68974.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 507

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 370 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 429

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 430 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 478


>gi|239834093|ref|ZP_04682421.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822156|gb|EEQ93725.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 226

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + AVP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAAVIGFTLSVGAYSSEIIRAVISAVPKGQWEAAYSIGMSWRQALSRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL +S +++   
Sbjct: 149 PLSNSFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLVMSSVLSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|237737432|ref|ZP_04567913.1| amino acid ABC transporter, permease [Fusobacterium mortiferum ATCC
           9817]
 gi|229421294|gb|EEO36341.1| amino acid ABC transporter, permease [Fusobacterium mortiferum ATCC
           9817]
          Length = 208

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 111/202 (54%), Gaps = 19/202 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS  LG++LSL   R+S++     G     + I T++  G P L+ +   + +++  PV
Sbjct: 24  VFSLPLGVILSL--GRISKNSLLNNG-----IQIYTWIFRGTPLLLQL---FFVYYGLPV 73

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G        T+SP   +    +  YTA F  EI R  ++ + +GQ EAA  LG+ + + 
Sbjct: 74  IG-------ITLSPFTAAALTFVINYTAYF-CEIFRGSILGIDKGQYEAAKVLGMNYWQT 125

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + +++PQA+ + +PPL ++ + L+K++SL  A+G A+++     I+ +   +I   +I 
Sbjct: 126 MKRIIIPQALITALPPLGNEAIALIKDTSLISALGMAEILRNSREIVTRD-FSITPFIIC 184

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             IYL LS ++ +F  R+  K+
Sbjct: 185 AAIYLILSTVVVIFFKRMEKKV 206


>gi|325686791|gb|EGD28816.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 521

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|307319923|ref|ZP_07599346.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306894463|gb|EFN25226.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 549

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 15/150 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251
           VL I+L L       + H +     PL   S F+   I G+P LV++     L+   P+ 
Sbjct: 354 VLAIILGLLT--FGGYLHRRH----PLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402

Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G   +   G    P  M   +A++   +A++AEI RSG+ A+P GQ+EAA ++GL   + 
Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            RLV+LPQA R IIPPL ++ + +LK++SL
Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSL 492


>gi|261753640|ref|ZP_05997349.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|261743393|gb|EEY31319.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
          Length = 250

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 78/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I+ +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 113 FPAALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232

Query: 386 NRLNAK 391
            RL  +
Sbjct: 233 VRLERR 238


>gi|256370356|ref|YP_003107867.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|256000519|gb|ACU48918.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
          Length = 240

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 8/168 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL +IS+  +     +  I + Y   +  P +G           PE +   IAL+ + ++
Sbjct: 50  PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S
Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +   +  A+L   G  +  +T    EI L    IY  ++ + A  M+R
Sbjct: 162 VLSTITVAELTYQGLVMQGETFAPFEIFLTTAAIYWMITAIFAYLMHR 209


>gi|120406977|ref|YP_956806.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119959795|gb|ABM16800.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 598

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 20/211 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   +LG+ L++     SR              I T +  GLP +V+I L          
Sbjct: 388 IIGLILGMALAIAGISKSRWLRWPA-------RIYTDIFRGLPEVVIILLIG-------- 432

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG    +G  T +  F     AL    AA++ EI RSG+ +V  GQ+EA+ ALG ++  +
Sbjct: 433 LGVGPVVGHLTGNNPFPLGIAALGLMAAAYVGEIFRSGIQSVDPGQLEASRALGFSYPTS 492

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEI 366
            RLV++PQ +R ++P L +Q+++LLK SSL   +G      +L  VG  +  QTG    +
Sbjct: 493 MRLVVVPQGVRRVLPALMNQFISLLKASSLVYFLGLIANQRELFQVGRDLNAQTGNLSPL 552

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +F YL+L+I +   +N ++ ++    K
Sbjct: 553 VAAGLF-YLALTIPLTHLVNFIDTRLRRGRK 582



 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G  NT  L  +  I   I+G  +    +S ++ + W  R+Y ++FR +P +V+I  +  
Sbjct: 374 TGLPNTLILTVAASIIGLILGMALAIAGISKSRWLRWPARIYTDIFRGLPEVVIILLIG- 432

Query: 151 SVLSVLPIPDH 161
             L V P+  H
Sbjct: 433 --LGVGPVVGH 441


>gi|283833896|ref|ZP_06353637.1| glutamine ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
 gi|291070567|gb|EFE08676.1| glutamine ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
          Length = 219

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 108/198 (54%), Gaps = 12/198 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  P+   FN 
Sbjct: 33  GLVIGL-AAGFARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPM--AFND 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+L
Sbjct: 85  L---RIDP-FSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRTETIRHVIL 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL 
Sbjct: 141 PLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLI 200

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++++++  + RL  ++ +
Sbjct: 201 ITLVLSFILRRLERRMKI 218


>gi|257870153|ref|ZP_05649806.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804317|gb|EEV33139.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 223

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 14/163 (8%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L   L+F  P              P   +  I  S  ++AFI EI R  + 
Sbjct: 67  GVPALVLLFL---LYFGLPY-----------QLPALTAAIICFSLTSSAFIGEIYRGSIA 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V RGQ +AA ALGL+  K  RL++LPQA R  +P L++  ++LLK +SLA  +   D+ 
Sbjct: 113 GVDRGQWDAAYALGLSFSKTLRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIPDIF 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                +  +T   + + ++   IY  L I I    +RL  + A
Sbjct: 173 QKAKIVGGRTFDYMSMYVLVAIIYWLLCIGIEALQHRLEKRFA 215


>gi|111657046|ref|ZP_01407843.1| hypothetical protein SpneT_02001722 [Streptococcus pneumoniae
           TIGR4]
          Length = 507

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 370 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 429

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 430 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 478


>gi|170024600|ref|YP_001721105.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|169751134|gb|ACA68652.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
          Length = 220

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 77/128 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +A   V+LPQA R+ +PPL + 
Sbjct: 93  IGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   +RL A
Sbjct: 153 FIGLVKDTSLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQSRLEA 212

Query: 391 KIALKEKK 398
            +  ++++
Sbjct: 213 HVNRQDQE 220


>gi|148983846|ref|ZP_01817165.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|147923993|gb|EDK75105.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|301799546|emb|CBW32096.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae OXC141]
          Length = 521

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 10/71 (14%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRN 138
           +L G   T  ++  G I   IIG  +G  R   LS NK       LV WI  VY+E+FR 
Sbjct: 293 LLRGSSITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWILNVYIEIFRG 352

Query: 139 IPPLVVIFFLY 149
            P +V    +Y
Sbjct: 353 TPMIVQSMVIY 363


>gi|308175099|ref|YP_003921804.1| cystine ABC transporter permease [Bacillus amyloliquefaciens DSM 7]
 gi|307607963|emb|CBI44334.1| cystine ABC transporter (permease) [Bacillus amyloliquefaciens DSM
           7]
          Length = 240

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 12/180 (6%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY---TA 278
           LYIS F   G P +V +   + + +  P L     I  S + P    LY A++ Y   +A
Sbjct: 59  LYISFFR--GTPIMVQL---FIVFYGIPALTALAGIDTSKMDP----LYAAIATYVLSSA 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A  AEI+R G+ +V RGQ EAA ++GL   +  R ++LPQA+    P + +  +  LK++
Sbjct: 110 ARAAEIIRGGVNSVDRGQAEAAFSIGLNGVQTFRRIILPQALVQAFPNIGNMVIGFLKDT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SLA ++G  D+   G T+I  +  ++E+ +    +Y + +++          +I   E +
Sbjct: 170 SLAFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLYYAAALLFECVFRWCEKRIKKDETR 229


>gi|301018232|ref|ZP_07182747.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300399819|gb|EFJ83357.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 222

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FCLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFCLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|241114115|ref|YP_002973590.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240868688|gb|ACS66346.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 229

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 6/136 (4%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           TV P + +L  A     +A+  EI+R+G+ +V  GQ+ AA ALGLT  +A R V+LPQA 
Sbjct: 94  TVGPIWAAL-AAFILAESAYYCEIIRAGIGSVKTGQLSAAKALGLTQWQALRHVILPQAF 152

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-- 378
           R++ P L +Q + LLK++SL   +   D +   G I  + G+ +E+ L    +YL L   
Sbjct: 153 RNMTPSLINQTIALLKDTSLVYVISLTDFLGAAGKIGQRDGRLVEMYLFSAAVYLVLCSF 212

Query: 379 ---IMIALFMNRLNAK 391
              ++ A+   R+ A+
Sbjct: 213 GVWLVAAVQKKRMGAR 228


>gi|323465674|gb|ADX69361.1| Amino acid ABC transporter permease protein [Lactobacillus
           helveticus H10]
          Length = 562

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 75/122 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P  Q EAA ALG+TH +    ++LPQA+++ +P +T++
Sbjct: 416 IIVSINTGAYLAEVIRGGIISTPESQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNE 475

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  
Sbjct: 476 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNLIER 535

Query: 391 KI 392
           K+
Sbjct: 536 KL 537



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E  +     T+   Y   I+ G   T  LA  G +    IG LVG           
Sbjct: 305 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTR 364

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+  A  +V W+  VYVE+FR  P +V    +Y
Sbjct: 365 GKRWALNVVKWLLSVYVEIFRGTPMMVQAAVIY 397


>gi|325677375|ref|ZP_08157040.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Rhodococcus equi ATCC 33707]
 gi|325551838|gb|EGD21535.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Rhodococcus equi ATCC 33707]
          Length = 598

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 13/171 (7%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +  GLP +V+I L          LG    + G T S  +     ALS   AA+I EI 
Sbjct: 414 TDIFRGLPAVVIILLVG--------LGVGPVVKGLTGSNPYWLGAAALSLLAAAYIGEIF 465

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V  GQMEAA ALG ++R++  LV++PQ +R ++P L +Q+++L+K+SSL   +G
Sbjct: 466 RSGIQSVEPGQMEAARALGFSYRRSMALVVIPQGVRRVLPALMNQFISLIKDSSLIYFLG 525

Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 +L +VG  +  QTG    ++   +F YL+L+I +   +N ++ ++
Sbjct: 526 LLVTQRELFAVGRDLNAQTGNLSPLVAAGLF-YLALTIPLTHLVNYIDRRL 575



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            G  NT  LA S  I  T IG L+    +S  + + W  RVY ++FR +P +V+I  +
Sbjct: 372 TGLPNTLILALSSGIVGTAIGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILLV 429


>gi|258622431|ref|ZP_05717453.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258623750|ref|ZP_05718709.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258583968|gb|EEW08758.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258585131|gb|EEW09858.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
          Length = 298

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLTLSMLFKQVEKR 291


>gi|257878816|ref|ZP_05658469.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257881454|ref|ZP_05661107.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257885725|ref|ZP_05665378.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257890675|ref|ZP_05670328.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260558382|ref|ZP_05830578.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207089|ref|ZP_05921778.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|257813044|gb|EEV41802.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257817112|gb|EEV44440.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257821581|gb|EEV48711.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257827035|gb|EEV53661.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260075556|gb|EEW63862.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078717|gb|EEW66419.1| amino acid ABC transporter [Enterococcus faecium TC 6]
          Length = 526

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222
           MFL   GL+     + T     V    LG+++ +F         L+R F +K G AL  +
Sbjct: 296 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 349

Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           Y+  F   G P +V        +AL + +  ++ +                 +L+I +S 
Sbjct: 350 YVEVFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 390

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++ EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +
Sbjct: 391 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 450

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++++   +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 451 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507


>gi|215487123|ref|YP_002329554.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|312967119|ref|ZP_07781337.1| L-cystine transport system permease protein tcyB [Escherichia coli
           2362-75]
 gi|215265195|emb|CAS09584.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|312288583|gb|EFR16485.1| L-cystine transport system permease protein tcyB [Escherichia coli
           2362-75]
          Length = 222

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|15896569|ref|NP_349918.1| amino acid ABC transporter permease [Clostridium acetobutylicum
           ATCC 824]
 gi|15026406|gb|AAK81258.1|AE007829_11 Amino acid ABC-type transporter, permease component [Clostridium
           acetobutylicum ATCC 824]
 gi|325510730|gb|ADZ22366.1| Amino acid ABC-type transporter, permease component [Clostridium
           acetobutylicum EA 2018]
          Length = 227

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 24/184 (13%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F+    +  PLL     + FGLPT+                       G T+ P   + 
Sbjct: 63  RFYVSIIRGTPLLVQLFIIFFGLPTV-----------------------GVTIKP-LTAA 98

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I  +    A+ +E++R+ ++++P+GQ EAA ++G+T+ ++   V+LPQA R  +PPL +
Sbjct: 99  IIGFTLSVGAYNSEVIRAAILSIPKGQWEAASSIGMTYTQSLVRVVLPQAARVSVPPLAN 158

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +++L+K++SLA  +  A++  V   I   T + + + +   FIY     ++ L  + L 
Sbjct: 159 SFISLVKDTSLAATITVAEMFQVAQRITATTYEPLWMYIEAAFIYYIFCSLLTLIQHYLE 218

Query: 390 AKIA 393
            K+A
Sbjct: 219 KKLA 222


>gi|327462865|gb|EGF09187.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
 gi|328944941|gb|EGG39099.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 521

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|238761028|ref|ZP_04622005.1| Glutamine transport system permease protein glnP [Yersinia
           kristensenii ATCC 33638]
 gi|238761281|ref|ZP_04622257.1| Glutamine transport system permease protein glnP [Yersinia
           kristensenii ATCC 33638]
 gi|238700255|gb|EEP92996.1| Glutamine transport system permease protein glnP [Yersinia
           kristensenii ATCC 33638]
 gi|238700508|gb|EEP93248.1| Glutamine transport system permease protein glnP [Yersinia
           kristensenii ATCC 33638]
          Length = 189

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 60  FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 119

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  +
Sbjct: 120 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 179

Query: 386 NRLNAKIAL 394
            RL  K+ +
Sbjct: 180 RRLERKLKI 188


>gi|237751712|ref|ZP_04582192.1| amino acid ABC transporter ATP-binding protein [Helicobacter bilis
           ATCC 43879]
 gi|229373078|gb|EEO23469.1| amino acid ABC transporter ATP-binding protein [Helicobacter bilis
           ATCC 43879]
          Length = 234

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 70/104 (67%), Gaps = 3/104 (2%)

Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           P+L Q   F +I  +T++  F++  +A+   ++A+IAEIVR+G+ +V +GQM+A  A+GL
Sbjct: 85  PLLIQLLVFAYIVFATLNDNFLAALVAIGLNSSAYIAEIVRAGIQSVDKGQMDAGRAMGL 144

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           TH    R +++PQA+++I+P L ++++ + K +S+   +   DL
Sbjct: 145 THSATMRHIIMPQAIKNILPSLANEFIVVFKETSVVGLISVNDL 188


>gi|320538105|ref|ZP_08038002.1| ABC transporter, permease protein [Treponema phagedenis F0421]
 gi|320145039|gb|EFW36758.1| ABC transporter, permease protein [Treponema phagedenis F0421]
          Length = 229

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 68/114 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   I L+  + A+I EI RSG+ A+  GQ EAA +LGL++R+  RL++ PQA ++ +
Sbjct: 99  DFIPGVITLAINSGAYICEIFRSGIQAIEIGQTEAARSLGLSYRQTLRLIIFPQAFKTAL 158

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           P L ++++ ++K SS+   +G ADL+     I   T    E +LI    Y  L+
Sbjct: 159 PTLGNEFIAVIKESSIVSVIGIADLMYKANVIRGNTFLPFEPLLIAALCYFLLT 212



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y    L+G  NT  LA   +    +IG ++  GR+S  K + +I   YVE  R  P L
Sbjct: 7   AKYWLYYLIGIKNTVLLALFTVAFGVLIGIVLVLGRISKQKWLRFISTAYVEFIRGTPLL 66

Query: 143 VVIFFLYKSVLSV-LPIPDHSIV-----LPFGMFL 171
           V +F +Y  + ++ +  P++ ++     +PF  F+
Sbjct: 67  VQLFIIYYGLPALGIKFPNNKLLSSIIGMPFSDFI 101


>gi|326203069|ref|ZP_08192935.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
 gi|325986715|gb|EGD47545.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
          Length = 218

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 77/127 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA   +  A+I+EI R  + ++ RGQ EAA ++G++  +A   ++LPQA++  +PPL +Q
Sbjct: 92  IAFGLHNGAYISEIFRGAIKSIDRGQFEAARSIGMSKFRAMYRIILPQALKRAVPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++   K+SSLA AV   +L+     + + T + +E  LI    Y  ++ ++  F+++L  
Sbjct: 152 FIIATKDSSLASAVTVKELLLKSQQMGSSTFRFMEYFLIAGIYYFIMTSILGFFVHKLEK 211

Query: 391 KIALKEK 397
           ++A+ ++
Sbjct: 212 RLAVSDR 218


>gi|94990274|ref|YP_598374.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS10270]
 gi|94543782|gb|ABF33830.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS10270]
          Length = 216

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    R ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVRKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|323493778|ref|ZP_08098896.1| putative amino-acid ABC transporter permease PatM [Vibrio
           brasiliensis LMG 20546]
 gi|323311912|gb|EGA65058.1| putative amino-acid ABC transporter permease PatM [Vibrio
           brasiliensis LMG 20546]
          Length = 223

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+      +FS VL ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMATWGLLFSLVLAVILANI-----RVFRVPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F ++ G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQV--FPWLVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|294618488|ref|ZP_06698052.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1679]
 gi|291595245|gb|EFF26574.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1679]
          Length = 540

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222
           MFL   GL+     + T     V    LG+++ +F         L+R F +K G AL  +
Sbjct: 310 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 363

Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           Y+  F   G P +V        +AL + +  ++ +                 +L+I +S 
Sbjct: 364 YVEVFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 404

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++ EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +
Sbjct: 405 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 464

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++++   +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 465 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 521


>gi|322833089|ref|YP_004213116.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168290|gb|ADW73989.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 228

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 109/212 (51%), Gaps = 18/212 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A   V + + G++++  A R         G    +L+I    I G+P   LI +
Sbjct: 30  LTLIMAASAGVLALLAGVLMAALAWRFG-------GWTRKILFIWASFIRGIP---LIFV 79

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + L+F  PV+      GGS   P  +++ +AL+ +T+A +     +GL A+PRGQ EA 
Sbjct: 80  IFWLYFLLPVV-----FGGSIPGP--LTVILALAWFTSAAVMHSTLAGLEALPRGQTEAG 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IA G+++ K    VLLPQA  +++P      ++L+K++SLA  V   +L +V G + N+ 
Sbjct: 133 IASGMSYGKVLLFVLLPQAWPNLLPSYLGLLISLVKDTSLAFIVNVPELTTVAGQVNNRV 192

Query: 361 G-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                EI L+   +Y  L + +A    R+  K
Sbjct: 193 QIYPAEIFLLVGLMYYLLCVTLAYLAGRVVRK 224


>gi|312141964|ref|YP_004009300.1| abc transporter substrate binding lipoprotein [Rhodococcus equi
           103S]
 gi|311891303|emb|CBH50624.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus
           equi 103S]
          Length = 598

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 13/171 (7%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +  GLP +V+I L          LG    + G T S  +     ALS   AA+I EI 
Sbjct: 414 TDIFRGLPAVVIILLVG--------LGVGPVVKGLTGSNPYWLGAAALSLLAAAYIGEIF 465

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V  GQMEAA ALG ++R++  LV++PQ +R ++P L +Q+++L+K+SSL   +G
Sbjct: 466 RSGIQSVEPGQMEAARALGFSYRRSMALVVIPQGVRRVLPALMNQFISLIKDSSLIYFLG 525

Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 +L +VG  +  QTG    ++   +F YL+L+I +   +N ++ ++
Sbjct: 526 LLVTQRELFAVGRDLNAQTGNLSPLVAAGLF-YLALTIPLTHLVNYIDRRL 575



 Score = 42.7 bits (99), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            G  NT  LA S  I  T IG L+    +S  + + W  RVY ++FR +P +V+I  +
Sbjct: 372 TGLPNTLILALSSGIVGTAIGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILLV 429


>gi|283455572|ref|YP_003360136.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|283102206|gb|ADB09312.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
          Length = 240

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  +   +V   F + ++ L    AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 57  EFWSVDSQSVITAFNAAWLGLVLNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMR 116

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++  
Sbjct: 117 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 176

Query: 372 FIYLSLSIMIALFMNRLN 389
             YL ++ ++ +  +RL 
Sbjct: 177 IWYLVITSILMIIQSRLE 194


>gi|149012202|ref|ZP_01833311.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|147763804|gb|EDK70738.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
          Length = 521

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492



 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145
           T  ++  G I   IIG  +G  R   LS NK       LV WI  VY+E+FR  P +V  
Sbjct: 300 TLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEIFRGTPMIVQS 359

Query: 146 FFLY 149
             +Y
Sbjct: 360 MVIY 363


>gi|238749889|ref|ZP_04611393.1| Glutamine transport system permease protein glnP [Yersinia rohdei
           ATCC 43380]
 gi|238711818|gb|EEQ04032.1| Glutamine transport system permease protein glnP [Yersinia rohdei
           ATCC 43380]
          Length = 218

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 89  FSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  +
Sbjct: 149 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 208

Query: 386 NRLNAKIAL 394
            RL  K+ +
Sbjct: 209 RRLERKLKI 217


>gi|238027408|ref|YP_002911639.1| Polar amino acid ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237876602|gb|ACR28935.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 248

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  A+GL+
Sbjct: 78  LGQFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGQAIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 IYL L+  +   +  + A+++
Sbjct: 198 FACAALIYLFLNFFVVRVLGCVEARLS 224


>gi|307308009|ref|ZP_07587727.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306901413|gb|EFN32017.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 549

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 15/150 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251
           VL I+L L       + H +     PL   S F+   I G+P LV++     L+   P+ 
Sbjct: 354 VLAIILGLLT--FGGYLHRRH----PLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402

Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G   +   G    P  M   +A++   +A++AEI RSG+ A+P GQ+EAA ++GL   + 
Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            RLV+LPQA R IIPPL ++ + +LK++SL
Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSL 492


>gi|295100980|emb|CBK98525.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC
           transporter membrane protein [Faecalibacterium
           prausnitzii L2-6]
          Length = 246

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 78/135 (57%), Gaps = 13/135 (9%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL  YT A++ E+VR+ + +VP+GQ EAA A G  + +    ++LPQ++  ++PP+ +Q
Sbjct: 98  IALGVYTGAYMGEVVRAAIESVPKGQFEAAQAQGFNYLQRMGYIILPQSIPVMLPPMVNQ 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQA-----IEIILIWMFIYLSLSIMIAL 383
            +NL KN+S    VG ADL+SV  + +    TG A     I   LI+  +   LS + A 
Sbjct: 158 VVNLFKNTSCLYIVGGADLISVTYSFVTGASTGGAYAPAYIVCGLIFFVVCFPLSTLAAR 217

Query: 384 FMNRLNAKIALKEKK 398
           +      + +LKE+K
Sbjct: 218 W------EASLKERK 226



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++  + L+G  NT   A   +  A IIG  +G    S +KL+  I R+YVE  +N P L+
Sbjct: 15  THRESFLLGLGNTLQTAVCALALAFIIGAALGLMSTSGSKLLRIIARIYVEFVQNTPLLL 74

Query: 144 VIFFLY 149
            + FLY
Sbjct: 75  QLCFLY 80


>gi|158313075|ref|YP_001505583.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EAN1pec]
 gi|158108480|gb|ABW10677.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EAN1pec]
          Length = 235

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 1/113 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ Y  A + E VRSG+  V  GQ EAA ALGLT  +  RLV+LPQA R+++ PL S 
Sbjct: 108 MALTIYHTALVCEAVRSGVNGVDAGQAEAARALGLTFSQTLRLVVLPQAFRNVVQPLGSV 167

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIA 382
              L++N+S+A A G  +L  +   +     G  I ++L  +  YL L++ +A
Sbjct: 168 GSALIRNTSIAAAFGVQELTGISQRLTTANPGDVIAVLLAGIVCYLVLTLSLA 220


>gi|317492512|ref|ZP_07950940.1| His/Glu/Gln/Arg/opine family amino ABC transporter
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919504|gb|EFV40835.1| His/Glu/Gln/Arg/opine family amino ABC transporter
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 222

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 73/118 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++  G  EA +ALGL+ R   R V++P A+R ++PPL +Q++  +K
Sbjct: 104 SGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIMPLALRRMLPPLGNQWIVSIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + RL  ++ +
Sbjct: 164 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSYVLRRLERRLKI 221


>gi|262173296|ref|ZP_06040973.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|261890654|gb|EEY36641.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
          Length = 298

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLTLSMLFKQVEKR 291


>gi|218248365|ref|YP_002373736.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 8801]
 gi|218168843|gb|ACK67580.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 8801]
          Length = 401

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 27/204 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIA 239
           LT+ T     V SF  GI+L+L      R       + L + YI   +I GLP + +L  
Sbjct: 201 LTLLTAIVSIVLSFPFGILLAL-----GRQSSLNVIRWLSIAYIE--VIRGLPLIGILFM 253

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQME 298
            +  L    PV        GS   P+ +   IA  + ++AA++AE VR GL +VP+GQ+E
Sbjct: 254 AQIMLPLILPV--------GS--RPDRVIRAIAGFTLFSAAYLAENVRGGLQSVPKGQIE 303

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL        ++LPQA++++IP +  Q+++L K++SL   VG  DL+ +  +I+ 
Sbjct: 304 AAKALGLNPIFVLIFIVLPQALKAVIPSIVGQFISLFKDTSLLAIVGLVDLLGISQSILA 363

Query: 359 Q---TGQAIEI-----ILIWMFIY 374
                G+  E+     ++ W+F Y
Sbjct: 364 NPKFIGRYGEVYLFIAVIYWIFCY 387


>gi|170690740|ref|ZP_02881906.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143989|gb|EDT12151.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 218

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 10/151 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G P +V +     L+F  P+L      G         +  IA++  + A++AE+VR 
Sbjct: 61  LIRGTPIVVQVMF---LYFALPLLAHLRIDG-------LTAAIIAITVNSGAYLAEVVRG 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L+++P+G MEA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +G  
Sbjct: 111 ALLSIPKGLMEAGLAMGLSTPRVLMKIIGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVG 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   G  II    +A+EI      IYL L+
Sbjct: 171 ELTRKGQEIIASNFRAVEIWSAVAVIYLVLT 201



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 13/107 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++AF G+I   I+G + G  R      +  I +VYVE+ R  P +V + FLY +    
Sbjct: 22  TVFIAFVGLIGGFIVGVVAGTCRAYGPLALNVIAQVYVELIRGTPIVVQVMFLYFA---- 77

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           LP+  H         L   GL+   + +  N+  ++   V G +LS+
Sbjct: 78  LPLLAH---------LRIDGLTAAIIAITVNSGAYLAEVVRGALLSI 115


>gi|229003760|ref|ZP_04161571.1| Amino acid ABC transporter [Bacillus mycoides Rock1-4]
 gi|228757493|gb|EEM06727.1| Amino acid ABC transporter [Bacillus mycoides Rock1-4]
          Length = 209

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 94/157 (59%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +FV+GI+L++F T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 10  TTIPLTIITFVIGIILAIF-TALARISSSRLLQWIARIYVS--IIRGTPLLVQL---FII 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          + P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 64  FYGLPTLN-------IEIDP-YPAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + ++LPQA R  IPPL++ +++L+K++SLA
Sbjct: 116 MTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 152



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 8/53 (15%)

Query: 105 IPATIIGTLVGA--------GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IP TII  ++G          R+S+++L+ WI R+YV + R  P LV +F ++
Sbjct: 12  IPLTIITFVIGIILAIFTALARISSSRLLQWIARIYVSIIRGTPLLVQLFIIF 64


>gi|171315680|ref|ZP_02904914.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171099212|gb|EDT43985.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 500

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 10/183 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++LG+++  F   L+R  H    K    +YI  F    LP LVL+   Y L    P   
Sbjct: 31  AWLLGVLIG-FPVALARQSHRPLLKRAAAVYIWFFR--SLPLLVLLVFIYNLPQVFPATS 87

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                  + +S  F +  IA+     A+ AEI R G+++VPRGQ+EA  ALG+      R
Sbjct: 88  -------AVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQR 140

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           ++++PQA+R  +P L ++++ ++K +SL   +  A+++ VG  +  Q     E +L   F
Sbjct: 141 MIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAF 200

Query: 373 IYL 375
            Y+
Sbjct: 201 YYV 203


>gi|170751306|ref|YP_001757566.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170657828|gb|ACB26883.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 226

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 18/201 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG+ L L  T L R F  +   AL  LY+  F   G P LV +   + + +  P  G
Sbjct: 30  AFALGLALGL-GTALVRLFAPRPLAALAWLYVWIFR--GTPLLVQL---FVIFYGLPSTG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    +   F +  I  +    A+ +EIVR+ + ++P+GQ EAA A G+T  +A R
Sbjct: 84  --------ILIDAFPAAVIGFTLNVGAYTSEIVRAAIASIPKGQWEAAYATGMTPVQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL 368
             +LPQA R  +P L + ++ L+K++SLA A+   +L      I+  T +     IE+ L
Sbjct: 136 RTILPQAARVAVPSLANSFIALVKDTSLAAAITVPELFQAAQRIVAVTYEPLILYIEVAL 195

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
           I++ +   LS +  L   RL 
Sbjct: 196 IYLVLSTLLSWLQTLLERRLG 216


>gi|296113907|ref|YP_003627845.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis RH4]
 gi|295921601|gb|ADG61952.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis RH4]
 gi|326561457|gb|EGE11807.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 46P47B1]
 gi|326562228|gb|EGE12556.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 7169]
 gi|326567182|gb|EGE17304.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis BC1]
 gi|326572018|gb|EGE22020.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis BC8]
 gi|326576286|gb|EGE26201.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis CO72]
          Length = 241

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 18/208 (8%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           V G++L L+  RLS     +   A+P  YI  F   G P LV I L Y        LGQF
Sbjct: 35  VFGVILGLW--RLSPVLWLR---AIPATYI--FFFRGTPLLVQIFLIYY------GLGQF 81

Query: 255 -----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                +F+     S  +    IA +  T+A+I EIVR  ++AVP G++EAA A+G++ ++
Sbjct: 82  TALKESFLWDPIFSQAYWCAIIAFTLNTSAYIGEIVRGAVMAVPTGELEAADAIGMSKQQ 141

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+LP+A   +IP  +++ + +LK S+LA ++   +L      II+ T   +E+   
Sbjct: 142 KLHRVILPRAFGIMIPAYSNEVIFMLKGSALAASITVVELTHKARDIISITYLHLEMFFA 201

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              IYL +S +      +   ++   ++
Sbjct: 202 AGMIYLVISWVFLFIFRQFEHRVNRHKR 229


>gi|227113888|ref|ZP_03827544.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 144

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 80/128 (62%), Gaps = 1/128 (0%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +A++A  V++G++A+ RGQ +A ++LGL+  +    ++LPQA+R ++P   +Q+
Sbjct: 4   ALALIASAYLAHGVKAGIVAIGRGQWQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQW 63

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y    + + L  N +N+
Sbjct: 64  ISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFVALVYFVFCLSLELLANGVNS 123

Query: 391 KIALKEKK 398
           + + +EK+
Sbjct: 124 RFSQQEKQ 131


>gi|226327561|ref|ZP_03803079.1| hypothetical protein PROPEN_01432 [Proteus penneri ATCC 35198]
 gi|225204087|gb|EEG86441.1| hypothetical protein PROPEN_01432 [Proteus penneri ATCC 35198]
          Length = 160

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 81/136 (59%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+  T+++IA  V++G++A+ +GQ +A ++LG    +    ++LPQA+R +
Sbjct: 4   PEITTVICALALITSSYIAHGVKAGILAIGKGQWQAGLSLGFNRWQVLWHIVLPQALRMM 63

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG  +L  +   + N++    +E+ L   FIY  L   + 
Sbjct: 64  VPSFINQWIALIKDTSLAYVVGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLE 123

Query: 383 LFMNRLNAKIALKEKK 398
           +  NR+    + +++K
Sbjct: 124 IIANRVAKLFSTQKEK 139


>gi|330504738|ref|YP_004381607.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328919024|gb|AEB59855.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 365

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 62/94 (65%), Gaps = 6/94 (6%)

Query: 264 PEFMSLYIALSC------YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           PE MSL   L        + AA+IAE+VR G+ A+P+GQ EAA A+GL + +   LV+LP
Sbjct: 222 PEGMSLDKLLRALVMVIFFEAAYIAEVVRGGMQAIPKGQYEAAAAMGLGYWRTMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QA++ +IP + + ++ L K++SL + +G  DL++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315


>gi|298379891|ref|ZP_06989496.1| glnP [Escherichia coli FVEC1302]
 gi|298279589|gb|EFI21097.1| glnP [Escherichia coli FVEC1302]
          Length = 159

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++P
Sbjct: 30  FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLP 89

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL ++++++  +
Sbjct: 90  PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFIL 149

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 150 RRLERRMKI 158


>gi|172062268|ref|YP_001809919.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171994785|gb|ACB65703.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 221

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 25/238 (10%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D S+V P+ + L  +GL+   LT+       +   +LG VLSL     SR          
Sbjct: 4   DFSVVWPYWLVLA-KGLA---LTLAFTVTCALVGSLLGFVLSLLRMSPSRWLRGP----- 54

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
               ++ F+ F   T +LI L + + F  PV+ +          P ++S+ I+L+ Y AA
Sbjct: 55  ----VTAFVEFFRGTPLLIQL-FWVFFCFPVVLRLPI-------PPYLSVLISLTLYMAA 102

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
             +E  R  L ++   Q +A IAL L+       V+ PQA+   IPPL S  ++L K S+
Sbjct: 103 ITSETFRGSLKSIAGEQHDACIALSLSPHVKIVYVIFPQALLRAIPPLLSNVVSLFKESA 162

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L  +VG ADL+ VG  + N T + +E    + +I+  +   L+ ++ +  +R+  + A
Sbjct: 163 LISSVGIADLMFVGQNVSNSTARPVEFLTTVAVIYFLVAFPLTRLVGVVESRMLRRYA 220


>gi|238798473|ref|ZP_04641953.1| Glutamine transport system permease protein glnP [Yersinia
           mollaretii ATCC 43969]
 gi|238717711|gb|EEQ09547.1| Glutamine transport system permease protein glnP [Yersinia
           mollaretii ATCC 43969]
          Length = 218

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 72/118 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PPL +Q++  +K
Sbjct: 100 SGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + RL  K+ +
Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217


>gi|28869962|ref|NP_792581.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853207|gb|AAO56276.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 220

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|193066391|ref|ZP_03047439.1| L-cystine ABC transporter, permease protein [Escherichia coli E22]
 gi|194429920|ref|ZP_03062430.1| L-cystine ABC transporter, permease protein [Escherichia coli B171]
 gi|260844322|ref|YP_003222100.1| putative transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|192925976|gb|EDV80622.1| L-cystine ABC transporter, permease protein [Escherichia coli E22]
 gi|194412009|gb|EDX28321.1| L-cystine ABC transporter, permease protein [Escherichia coli B171]
 gi|257759469|dbj|BAI30966.1| predicted transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|323158598|gb|EFZ44612.1| L-cystine transport system permease protein tcyB [Escherichia coli
           E128010]
          Length = 222

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.4 bits (85), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAEYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|291563078|emb|CBL41894.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [butyrate-producing
           bacterium SS3/4]
          Length = 229

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 18/192 (9%)

Query: 207 LSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPV-LGQFNFIGGSTV 262
           L R  +   GK  PL  I+T    +I G P L+ +   Y  +F  P  L  FN       
Sbjct: 45  LMRRSNVGIGKFKPLRLIATVYVEIIRGTPILLQL---YFFYFMLPTWLPFFNL------ 95

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
             EF  +  A    + A++ EIVR+G+ AV  GQ EAA +LGL  R+    ++LPQA+++
Sbjct: 96  -SEFTCVMTACCVNSTAYVCEIVRAGIQAVDVGQTEAARSLGLNARQTMIHIVLPQAVKN 154

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS----LS 378
           I+P L ++++ ++K +SLA      +L++   TI   T + +E + I   IY      +S
Sbjct: 155 ILPALCNEFVAIVKETSLASTFFIGELMTQFKTINGLTFRVLEPLTIVGIIYFGVTFIMS 214

Query: 379 IMIALFMNRLNA 390
            +IAL   R+NA
Sbjct: 215 KLIALLERRMNA 226


>gi|218682669|ref|ZP_03530270.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894]
          Length = 219

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 67/114 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL+ ++AAF+AEI R  + ++ RGQ EA+ +LG+   +  R V+LPQA+R  
Sbjct: 84  PAWLAAGLALTLWSAAFLAEIWRGCVESIARGQWEASASLGMVRLQQMRYVILPQALRVA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           IPP     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L
Sbjct: 144 IPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL 197


>gi|170748675|ref|YP_001754935.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170655197|gb|ACB24252.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 230

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLI 290
           +L L+ + +  +F  P +G   ++ GST   +   F S  I    + AA+ +EI+R+G+ 
Sbjct: 67  SLPLVLVIFWFYFLVPYIG--AYLTGSTTPIQVGAFPSALITFMAFEAAYFSEIMRAGIQ 124

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ  AA ALG+ + +    V+LPQA R+++P L +Q + L +++SL   +   D +
Sbjct: 125 SIPKGQTAAAQALGMNYWQTMGNVILPQAFRNMLPLLLTQTIILFQDTSLVYVLSLTDFM 184

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                +  + G+ +E+ +    +Y ++    +  + RL  ++A+
Sbjct: 185 GAASKVAQRDGRLVEMYVFAAVVYFAICFSASYLVRRLQRRVAI 228


>gi|320547997|ref|ZP_08042278.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320447343|gb|EFW88105.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 523

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHAQTMRKIVLPQVVRNILPATGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 494


>gi|229591449|ref|YP_002873568.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229363315|emb|CAY50433.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 247

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 11/174 (6%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +++ G+P L++I   Y   F  P+L   N  G       FM++   L  Y +A++ E
Sbjct: 66  VWVYVLRGIPLLMVIFWTY---FLVPLLIGHNITG-------FMTMLCTLVIYQSAYLCE 115

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R G+ A+P GQ EA+ ALGL + + T  V+LPQA+ + +P L SQ+++++K +SL   
Sbjct: 116 IIRGGIQALPAGQYEASRALGLGYVRTTVWVILPQALYNALPSLISQFISIIKETSLGYV 175

Query: 344 VGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   ++      + NQ   +  ++  I   IY  L   +      +  +IA K 
Sbjct: 176 INVQEVTFAANQVNNQLLTKPFQVFFILAIIYYLLCFGLTRLAGWVEQRIARKR 229


>gi|189022725|ref|YP_001932466.1| Cystine transport system permease protein [Brucella abortus S19]
 gi|237817022|ref|ZP_04596014.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260756561|ref|ZP_05868909.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260763232|ref|ZP_05875564.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882379|ref|ZP_05893993.1| amino acid ABC transporter permease [Brucella abortus bv. 9 str.
           C68]
 gi|261216130|ref|ZP_05930411.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|297249512|ref|ZP_06933213.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|189021299|gb|ACD74020.1| Cystine transport system permease protein [Brucella abortus S19]
 gi|237787835|gb|EEP62051.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260673653|gb|EEX60474.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676669|gb|EEX63490.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260871907|gb|EEX78976.1| amino acid ABC transporter permease [Brucella abortus bv. 9 str.
           C68]
 gi|260917737|gb|EEX84598.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|297173381|gb|EFH32745.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
          Length = 250

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 113 FPAALIGFTLNIGAYSSEIIRTVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232

Query: 386 NRLNAK 391
            RL  +
Sbjct: 233 VRLERR 238


>gi|238784074|ref|ZP_04628089.1| Glutamine transport system permease protein glnP [Yersinia
           bercovieri ATCC 43970]
 gi|238788814|ref|ZP_04632605.1| Glutamine transport system permease protein glnP [Yersinia
           frederiksenii ATCC 33641]
 gi|238715051|gb|EEQ07048.1| Glutamine transport system permease protein glnP [Yersinia
           bercovieri ATCC 43970]
 gi|238723119|gb|EEQ14768.1| Glutamine transport system permease protein glnP [Yersinia
           frederiksenii ATCC 33641]
          Length = 218

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 72/118 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PPL +Q++  +K
Sbjct: 100 SGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + RL  K+ +
Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217


>gi|331268245|ref|YP_004394737.1| amino acid ABC transporter permease [Clostridium botulinum
           BKT015925]
 gi|329124795|gb|AEB74740.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           BKT015925]
          Length = 235

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 109/194 (56%), Gaps = 27/194 (13%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           LPF  FLN  G++   L++ T     + S +LG V +L   +LSR    K  +A+  ++I
Sbjct: 15  LPF--FLNGAGITI-ILSLIT----VLLSSILGTVFALM--KLSRI---KILRAISTIFI 62

Query: 225 STFLIFGLPTLVLIALKYQLHFDKP--------VLGQFNFIGGSTVSPEFMSLYIALSCY 276
              ++ G P LV +   Y  ++  P         L Q + +G        + + +AL+  
Sbjct: 63  E--IVRGTPLLVQV---YIFYYGIPEVLENIGVYLPQIDIMGNDFTGLSMIVITLALN-- 115

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AEI+R G+ ++ +GQ+EAA +LGLT   A R V++PQA+++I+P L ++++ ++K
Sbjct: 116 STAYVAEIIRGGIESINKGQIEAARSLGLTQSMAMRYVIIPQAIKNILPALGNEFITVIK 175

Query: 337 NSSLAVAVGFADLV 350
            SS+   VG  +L+
Sbjct: 176 ESSIVSVVGIKELM 189


>gi|222148882|ref|YP_002549839.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735868|gb|ACM36831.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 395

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 60/82 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S +++A++AE++R GL A+P+GQ E A +LGL++ +  RL++LPQA++ +IP + + 
Sbjct: 263 VGVSIFSSAYMAEVIRGGLQAIPKGQFEGADSLGLSYWQKIRLIVLPQAIKLVIPGIVNT 322

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++SL   +G  DL+ +
Sbjct: 323 FIGLFKDTSLVSIIGMFDLLGI 344


>gi|192291279|ref|YP_001991884.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
 gi|192285028|gb|ACF01409.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
          Length = 362

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 57/81 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +  A++AE+VR GL AVPRGQ EAA+ALGL + ++ RL++LPQA+R+++P L + 
Sbjct: 232 VMLALFWTAYVAEVVRGGLQAVPRGQEEAALALGLGYWRSMRLIVLPQALRAVVPGLVNL 291

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            +  L  +SL   +G  D++ 
Sbjct: 292 GIGFLLATSLLAVIGIMDIIG 312


>gi|324989902|gb|EGC21844.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 521

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|126668365|ref|ZP_01739323.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17]
 gi|126627181|gb|EAZ97820.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17]
          Length = 361

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 61/87 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + M   I ++ + +A++AE+VR GL A+P+GQ EAA ALGL + + T LV+LPQA+  +I
Sbjct: 225 KLMRALIGITLWQSAYMAEVVRGGLQAIPKGQYEAASALGLGYWRKTGLVVLPQALTLVI 284

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351
           P + + +++L K+++L + +G  D++ 
Sbjct: 285 PGIVNTFISLFKDTTLVLIIGLFDILG 311



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA+ G++ A  IGT++  GR S   ++  +C V++EV+R +P + V+F    S
Sbjct: 153 GLMLTLILAYVGILAALPIGTILALGRRSDMPIIRGMCVVFIEVWRAVPLITVLFM--AS 210

Query: 152 VLSVLPIPD 160
           V+  L +PD
Sbjct: 211 VMLPLFLPD 219


>gi|152995146|ref|YP_001339981.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150836070|gb|ABR70046.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 236

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ + S VLG + +L    L+R       +A+P  YI  F   G P LV I L Y     
Sbjct: 22  QLVLISIVLGGIFAL-PIALARISPVAWIRAIPFAYI--FFFRGTPLLVQIFLVYYGA-- 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                QF+ +  S + P     Y    IA +  T+A+ AEI R  + A+P+G++EA   +
Sbjct: 77  ----SQFDAVRESFLWPILREPYWCAIIAFTLNTSAYTAEIFRGAIQAIPQGEVEACKVI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R VLLP+A   ++P   ++ + +LK S+LA  +   DL  +  TII +T   
Sbjct: 133 GMTKFQMYRRVLLPRAFGIVLPAYGNEIILMLKGSALASTITILDLTGMARTIIARTYTP 192

Query: 364 IEIILIWMFIYLSLSIMI 381
           +EI L    IYL +SI+I
Sbjct: 193 MEIFLAAGAIYLVISIVI 210


>gi|23500425|ref|NP_699865.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|23464048|gb|AAN33870.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
          Length = 226

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 78/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I+ +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|257899437|ref|ZP_05679090.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|257837349|gb|EEV62423.1| amino acid ABC transporter [Enterococcus faecium Com15]
          Length = 526

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222
           MFL   GL+     + T     V    LG+++ +F         L+R F +K G AL  +
Sbjct: 296 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 349

Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           Y+  F   G P +V        +AL + +  ++ +                 +L+I +S 
Sbjct: 350 YVEIFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 390

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++ EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +
Sbjct: 391 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 450

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++++   +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 451 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507


>gi|145221452|ref|YP_001132130.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145213938|gb|ABP43342.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium gilvum PYR-GCK]
          Length = 598

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   +LG+ L++     SR              + T +  GLP +V+I L          
Sbjct: 388 IIGLILGMALAIAGISKSRWLRWPA-------RVYTDIFRGLPEVVIILLIG-------- 432

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG    +G  T +  F     AL    AA++ EI RSG+ +V  GQ+EA+ ALG ++  +
Sbjct: 433 LGVGPVVGHLTNNNPFPLGIAALGLMAAAYVGEIFRSGIQSVDPGQLEASRALGFSYSTS 492

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEI 366
            RLV++PQ +R ++P L +Q+++LLK SSL   +G      +L  VG  +  QTG    +
Sbjct: 493 MRLVVVPQGVRRVLPALMNQFISLLKASSLVYFLGLIANQRELFQVGRDLNAQTGNLSPL 552

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +F YL+L+I +   +N ++ ++
Sbjct: 553 VAAGLF-YLALTIPLTHLVNYIDVRL 577



 Score = 36.6 bits (83), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G  NT  L     I   I+G  +    +S ++ + W  RVY ++FR +P +V+I  +  
Sbjct: 374 TGLPNTLILTICASIIGLILGMALAIAGISKSRWLRWPARVYTDIFRGLPEVVIILLIG- 432

Query: 151 SVLSVLPIPDH 161
             L V P+  H
Sbjct: 433 --LGVGPVVGH 441


>gi|311279324|ref|YP_003941555.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308748519|gb|ADO48271.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 243

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 109/216 (50%), Gaps = 29/216 (13%)

Query: 189 IFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLVLIAL 240
           +F+ +FV G +L++   A R+SR          PLL      YI  F   G P L+ + L
Sbjct: 25  LFISAFVCGGILAVGVLAMRMSRW---------PLLSGFAKGYILVFR--GSPLLIQLFL 73

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            Y        LGQF  I  S + P     F+   +ALS  TAA+ AEI+R  L+AVP GQ
Sbjct: 74  IYY------GLGQFGVIRHSFLWPLLREPFICAVLALSLCTAAYTAEILRGALLAVPPGQ 127

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EA  A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   I
Sbjct: 128 IEAGQACGMSRFLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQI 187

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I +T + +E+ L    IYL L+ +I      L  K+
Sbjct: 188 IQRTYRTMEVFLCAAAIYLLLNFIIVQLYALLERKL 223


>gi|296160743|ref|ZP_06843557.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295889046|gb|EFG68850.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 251

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +GQF  I  S + P     +M   ++L+  TA + AEI+R GL+ VP GQ+EA  ++GL+
Sbjct: 78  MGQFGVIRESFLWPVLREPYMCAVLSLALCTAGYTAEIIRGGLMTVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ +I   +  L  +++
Sbjct: 198 FICAALIYLFLNFVIVRLLGLLETRLS 224


>gi|261409441|ref|YP_003245682.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Paenibacillus
           sp. Y412MC10]
 gi|261285904|gb|ACX67875.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus sp. Y412MC10]
          Length = 217

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 22/226 (9%)

Query: 173 NRGLSF-PTLTMDTNAKIFV--FSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTF 227
           N  + F PTL       I V  FS +L I +S  A   RLS+ +  +T  A+   Y+  F
Sbjct: 3   NSWIDFLPTLLKGAEITIIVAFFSAILAIAMSFAAGLCRLSKLWIVRTATAV---YVEIF 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
                 T +L+ L + L+F  P      FIG     P+ ++  +A+     A+ +EIVRS
Sbjct: 60  R----GTSLLVQL-FWLYFALP------FIGIEL--PKMLAAILAIGLNFGAYGSEIVRS 106

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++AVP+GQ EAA+AL +   +    V+LPQA   ++PP  +Q + L+K++SL   +  A
Sbjct: 107 AVLAVPKGQWEAAVALNMKPWQRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMA 166

Query: 348 DLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           DL      + N       EI+++ +F+Y  ++ ++++ +  L  K+
Sbjct: 167 DLTYQAMVLRNNYISWTTEILVLLLFMYFVIATLVSMAVRLLERKL 212


>gi|170720092|ref|YP_001747780.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169758095|gb|ACA71411.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 365

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           PE MS        I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QA++ +IP + + ++ L K++SL + +G  DL++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315


>gi|284033080|ref|YP_003383011.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283812373|gb|ADB34212.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 273

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 80/129 (62%), Gaps = 5/129 (3%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           +++AL    AA++AE++R+G+ AVP+GQ+EAA +LG+    ATR ++LPQA R ++PPLT
Sbjct: 143 VWLALGIVAAAYMAEVIRAGIQAVPKGQVEAARSLGMPPGLATRKIVLPQAFRIVLPPLT 202

Query: 329 SQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           +  + L+K+SSL   +G +    +L   G  + N       ++    F YL +++ + L 
Sbjct: 203 NDLILLVKDSSLVFIIGTSATAYELTGFGRELANTYANLTPLVTAG-FCYLLITLPLGLL 261

Query: 385 MNRLNAKIA 393
           + RL +K A
Sbjct: 262 VRRLESKAA 270



 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           ++++   +L   V T        +   I GTL+   RLS+     WI   Y+E FR +P 
Sbjct: 57  EAAFRDGLLSALVKTLEYTAGAFVIGLIGGTLLALMRLSSVGPYRWIATAYIEFFRGLPA 116

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           +VV         S+LP+    + +PF
Sbjct: 117 IVVFI-----AFSLLPLAFEGMRIPF 137


>gi|260564759|ref|ZP_05835244.1| cystine transport system permease [Brucella melitensis bv. 1 str.
           16M]
 gi|265989983|ref|ZP_06102540.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265992906|ref|ZP_06105463.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|260152402|gb|EEW87495.1| cystine transport system permease [Brucella melitensis bv. 1 str.
           16M]
 gi|262763776|gb|EEZ09808.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000652|gb|EEZ13342.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 250

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 113 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232

Query: 386 NRLNAK 391
            RL  +
Sbjct: 233 VRLERR 238


>gi|227514604|ref|ZP_03944653.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus fermentum ATCC 14931]
 gi|227087015|gb|EEI22327.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus fermentum ATCC 14931]
          Length = 223

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 32/210 (15%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHF 246
           F  ++G V  +  T  SR       + +  LY+  F I  +PT+VL+ L Y     QLH 
Sbjct: 35  FGLIVGTVFGVLRTTKSRVL-----RFILRLYLEIFRI--IPTVVLLFLVYYILPRQLHI 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P               ++M++ +A S + AA  ++IVR  + +VPR Q E+ +A+GLT
Sbjct: 88  NMP--------------ADWMAV-LAFSLWVAAEFSDIVRGAIQSVPRHQRESGLAIGLT 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +LLPQAM+  +P   +    ++K +SL + +   D+++VG  II         
Sbjct: 133 RFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNSTYPT 192

Query: 367 ILIWM-----FIYLSLSIMIALFMNRLNAK 391
            + W+     F+Y  +  +++L+  +L A+
Sbjct: 193 GVFWVYGLIFFLYFIIDYLLSLWARKLTAR 222



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 42/68 (61%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S  + ++ G   + W+A   +    I+GT+ G  R + ++++ +I R+Y+E+FR IP 
Sbjct: 11  EGSNFSRLMGGLWVSVWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPT 70

Query: 142 LVVIFFLY 149
           +V++F +Y
Sbjct: 71  VVLLFLVY 78


>gi|325697553|gb|EGD39439.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 521

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+EVFR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEVFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|255994765|ref|ZP_05427900.1| amino acid ABC transporter, permease protein [Eubacterium saphenum
           ATCC 49989]
 gi|255993478|gb|EEU03567.1| amino acid ABC transporter, permease protein [Eubacterium saphenum
           ATCC 49989]
          Length = 220

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 76/127 (59%), Gaps = 1/127 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF +   A     AA+ AEI R G+ ++ +GQ EAA ALG+   +  + ++LPQAM++++
Sbjct: 85  EFETAAFAFVLNYAAYFAEIYRGGINSIDKGQYEAAFALGVPRWRTMKDIILPQAMKAML 144

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP+ ++ + L+K+++LA A+   D++ V   ++++    I+I L    IYL L+ +  + 
Sbjct: 145 PPIANEAIVLIKDTALASAITLMDIMKVSQAVVSRNSD-IKIFLYAAVIYLILTGITTII 203

Query: 385 MNRLNAK 391
             R+  +
Sbjct: 204 AKRIEKR 210


>gi|239833265|ref|ZP_04681593.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821328|gb|EEQ92897.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 231

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 91/198 (45%), Gaps = 24/198 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F   LG +    A RL    + +  +  PLL I   + FGLPTL                
Sbjct: 36  FIVALGRITPSRALRLIAATYVQLIQGTPLLVIMFIIYFGLPTL---------------- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  G +++P F +  I+L+ Y +A++ EI R  L +VP+ Q E A  L L+  +  
Sbjct: 80  -------GFSITPLFAA-GISLTIYVSAYLGEIWRGCLESVPKAQWEGAECLALSRTQRM 131

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V+LPQA+R   PP     + ++KN+SLA  VGF +L   G  I N   +   I LI  
Sbjct: 132 FKVILPQAVRIATPPTVGFSVQIVKNTSLASVVGFVELTRAGQLINNSIFEPFLIYLIVA 191

Query: 372 FIYLSLSIMIALFMNRLN 389
            +Y  L   ++ F  RL 
Sbjct: 192 ALYFCLCFPLSAFSQRLE 209


>gi|28896781|ref|NP_796386.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260362451|ref|ZP_05775393.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260876541|ref|ZP_05888896.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897402|ref|ZP_05905898.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|28804989|dbj|BAC58270.1| amino acid ABC transproter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308087935|gb|EFO37630.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090363|gb|EFO40058.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308111819|gb|EFO49359.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
          Length = 223

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           TM+      VFS +L ++L+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    PV+   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQIFPVMVGID---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRNQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|327468260|gb|EGF13745.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 521

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|315446796|ref|YP_004079675.1| amino acid ABC transporter substrate-binding protein, PAAT family
           ;amino acid ABC transporter membrane protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|315265099|gb|ADU01841.1| amino acid ABC transporter substrate-binding protein, PAAT family
           ;amino acid ABC transporter membrane protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 598

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 20/206 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   +LG+ L++     SR              + T +  GLP +V+I L          
Sbjct: 388 IIGLILGMALAIAGISKSRWLRWPA-------RVYTDIFRGLPEVVIILLIG-------- 432

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG    +G  T +  F     AL    AA++ EI RSG+ +V  GQ+EA+ ALG ++  +
Sbjct: 433 LGVGPVVGHLTNNNPFPLGIAALGLMAAAYVGEIFRSGIQSVDPGQLEASRALGFSYSTS 492

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEI 366
            RLV++PQ +R ++P L +Q+++LLK SSL   +G      +L  VG  +  QTG    +
Sbjct: 493 MRLVVVPQGVRRVLPALMNQFISLLKASSLVYFLGLIANQRELFQVGRDLNAQTGNLSPL 552

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +F YL+L+I +   +N ++ ++
Sbjct: 553 VAAGLF-YLALTIPLTHLVNYIDVRL 577



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G  NT  L     I   I+G  +    +S ++ + W  RVY ++FR +P +V+I  +  
Sbjct: 374 TGLPNTLILTICASIIGLILGMALAIAGISKSRWLRWPARVYTDIFRGLPEVVIILLIG- 432

Query: 151 SVLSVLPIPDH 161
             L V P+  H
Sbjct: 433 --LGVGPVVGH 441


>gi|261220512|ref|ZP_05934793.1| amino acid ABC transporter permease [Brucella ceti B1/94]
 gi|265996140|ref|ZP_06108697.1| amino acid ABC transporter permease [Brucella ceti M490/95/1]
 gi|260919096|gb|EEX85749.1| amino acid ABC transporter permease [Brucella ceti B1/94]
 gi|262550437|gb|EEZ06598.1| amino acid ABC transporter permease [Brucella ceti M490/95/1]
          Length = 250

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 113 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232

Query: 386 NRLNAK 391
            RL  +
Sbjct: 233 VRLERR 238


>gi|254507308|ref|ZP_05119444.1| amino acid ABC transproter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219549768|gb|EED26757.1| amino acid ABC transproter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 223

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 97/170 (57%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+      +FS +L ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMAVWGLIFSLILSVILANI-----RVFKVPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F ++ G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQI--FPWMVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|171741042|ref|ZP_02916849.1| hypothetical protein BIFDEN_00108 [Bifidobacterium dentium ATCC
           27678]
 gi|171276656|gb|EDT44317.1| hypothetical protein BIFDEN_00108 [Bifidobacterium dentium ATCC
           27678]
          Length = 235

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  +   +V   F + ++ L    AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 52  EFWSVDSQSVITAFNAAWLGLVLNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMR 111

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++  
Sbjct: 112 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 171

Query: 372 FIYLSLSIMIALFMNRLN 389
             YL ++ ++ +  +RL 
Sbjct: 172 IWYLVITSILMIIQSRLE 189


>gi|163745577|ref|ZP_02152937.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
 gi|161382395|gb|EDQ06804.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
          Length = 432

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 11/158 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A  L R  H    K + +++I    + G+P + L+       F   V+  + F  GS V 
Sbjct: 245 ALALGRQSHLPIVKGICVVFIE--FVRGVPLITLL-------FVANVMLAYFFPPGSGVD 295

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F+ + I ++ +++A+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQAM+  
Sbjct: 296 -LFIRVVIMITMFSSAYIAEVIRGGLAALPKGQYEAADSLGLDYAQAMRLIILPQAMKIS 354

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
           IP + +  + L K+++L   +   D++  + G I+  T
Sbjct: 355 IPGIVNIAVGLFKDTTLVSVISLFDIIGMIRGPILAST 392


>gi|254248453|ref|ZP_04941773.1| hypothetical protein BCPG_03284 [Burkholderia cenocepacia PC184]
 gi|124874954|gb|EAY64944.1| hypothetical protein BCPG_03284 [Burkholderia cenocepacia PC184]
          Length = 235

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 34/246 (13%)

Query: 165 LPFG------MFLNNRGLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           +PFG      MF  N     P L      T++  A  FV S VLG++L+L   ++SR+  
Sbjct: 1   MPFGRRIGDLMFFQNAIDFLPILLKGAVVTIEITACAFVLSSVLGLILALM--KVSRNRA 58

Query: 213 EKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
             T         ST +  I GLP +V +   + ++F  P LG    +  S      + L 
Sbjct: 59  VATAG-------STIVNVIRGLPIIVQL---FYMYFVLPDLG----VQLSAFQAGVLGLG 104

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA S Y A    E  R+G+ A+ RGQ+EAA A+G+      R V+LPQA R  +PP  + 
Sbjct: 105 IAYSAYQA----ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNT 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK+SS+A  +  A++   G  I + T Q + +  +   +YL+L + +   +NRL  
Sbjct: 161 LVMLLKDSSVASTITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFAVNRLGK 220

Query: 391 KIALKE 396
           ++AL+ 
Sbjct: 221 RLALRR 226


>gi|84515669|ref|ZP_01003030.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Loktanella vestfoldensis SKA53]
 gi|84510111|gb|EAQ06567.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Loktanella vestfoldensis SKA53]
          Length = 497

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 15/124 (12%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+P+GQ EAA +LGL + K+ RL++LPQA++  IP + + 
Sbjct: 368 IMVTLFASAYLAEVVRGGLAALPKGQYEAADSLGLDYWKSMRLIILPQALKISIPGIVNT 427

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-------MIAL 383
           ++ L K+++L V +G  D + +          AI     W  IY  L I       M   
Sbjct: 428 FIGLFKDTTLVVFIGLRDPLGL--------TNAIRATSEWNGIYWELYIFVGGLFFMFCF 479

Query: 384 FMNR 387
           FM+R
Sbjct: 480 FMSR 483



 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +PYT+  ++   +L   + T     SG++ +  +G  +  GR S+  L+ W+C  ++EV 
Sbjct: 280 LPYTASENFGGFMLAIIIGT-----SGIVLSLPLGIALALGRQSSMPLIKWVCVSFIEVI 334

Query: 137 RNIPPLVVIF 146
           R +P +V +F
Sbjct: 335 RGVPLIVWLF 344


>gi|319937507|ref|ZP_08011912.1| hypothetical protein HMPREF9488_02748 [Coprobacillus sp. 29_1]
 gi|319807347|gb|EFW03956.1| hypothetical protein HMPREF9488_02748 [Coprobacillus sp. 29_1]
          Length = 226

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 77/131 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   IALS  + A+  E++RSG+  V +GQ EA   +G+ + +  R V+LPQA + I+P
Sbjct: 96  FICGLIALSINSGAYSTELIRSGIQGVDKGQWEACETIGMNYIQTMRHVILPQAFKRIVP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+ S+++ L+K+SSL   +G ++L+     +       +  ++    +YL++++ ++ F 
Sbjct: 156 PIVSEFITLIKDSSLISCIGVSELLLRTQVMGANYSNYLVPLVTAGCMYLAMTLTVSYFA 215

Query: 386 NRLNAKIALKE 396
            RL  K+A  +
Sbjct: 216 RRLERKLAASD 226



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 27/44 (61%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           I+GTL  A +LS  K++  +  VYVEV R  P L+ I F Y +V
Sbjct: 36  ILGTLGAAAKLSKYKILRILGNVYVEVIRGTPMLLQILFFYLAV 79


>gi|242240068|ref|YP_002988249.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132125|gb|ACS86427.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 239

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 19/200 (9%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245
           +F  SF +G VLS  L A R+S +      + L        LIF G P L+ + L Y   
Sbjct: 24  LFFASFAIGAVLSILLVAMRVSAN------RPLRGFARGYMLIFRGTPLLIQLFLLYY-- 75

Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                LGQF+ +  S + P     F    ++L+  TA + AEI+R  L+A+P GQ+EA +
Sbjct: 76  ----GLGQFSMVRNSVLWPLLREPFTCAVLSLALCTAGYTAEILRGALLAIPVGQIEAGL 131

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++     R ++ P A+R  +P  +++ + L+K+++LA  V   D+  V   II +T 
Sbjct: 132 ACGMSRWLLLRRIIAPVALRYALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTY 191

Query: 362 QAIEIILIWMFIYLSLSIMI 381
           + +E+ +    IYL L+ +I
Sbjct: 192 RTMEVFVCAALIYLLLNFII 211


>gi|330873113|gb|EGH07262.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330963201|gb|EGH63461.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 365

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + +A  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRAMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|328471236|gb|EGF42138.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 223

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           TM+      VFS +L ++L+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    PV+   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQIFPVMVGID---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|327472311|gb|EGF17742.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 521

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|298487227|ref|ZP_07005276.1| glutamine transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298158251|gb|EFH99322.1| glutamine transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320324044|gb|EFW80127.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|330890818|gb|EGH23479.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330985342|gb|EGH83445.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 220

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|229815591|ref|ZP_04445918.1| hypothetical protein COLINT_02642 [Collinsella intestinalis DSM
           13280]
 gi|229808821|gb|EEP44596.1| hypothetical protein COLINT_02642 [Collinsella intestinalis DSM
           13280]
          Length = 463

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 3/126 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++  +AA++ EI R+G+ ++P+GQ EAA +LG++  +    +++PQ  R++IP LTS+
Sbjct: 309 IVMAMNSAAYLCEIFRAGIQSIPKGQSEAARSLGMSAAQTMVSIIIPQTFRNVIPTLTSE 368

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIALFMNR 387
           ++ L K++SL  AVG  ++V    TI+  TG     +   L ++ + L L+ +++L   R
Sbjct: 369 FILLYKDTSLLAAVGVMEIVMYAKTIVATTGSITPYVVAALFYLVVTLPLARVVSLLELR 428

Query: 388 LNAKIA 393
           L    A
Sbjct: 429 LTGATA 434


>gi|194290844|ref|YP_002006751.1| binding-protein-dependent transporter inner membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224679|emb|CAQ70690.1| putative Binding-protein-dependent transporter, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 217

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ EA+ ALG+T+ +  R V+LPQ +  +
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRVVLPQMVSRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++  +F YL +++++  
Sbjct: 145 LPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAALF-YLVMTLILTW 203

Query: 384 FMNRLNAKIALKEK 397
           F   L  + A  + 
Sbjct: 204 FFQNLEKRYAKHDD 217


>gi|161620737|ref|YP_001594623.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|254703029|ref|ZP_05164857.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|260568042|ref|ZP_05838511.1| cystine transport system permease [Brucella suis bv. 4 str. 40]
 gi|161337548|gb|ABX63852.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|260154707|gb|EEW89788.1| cystine transport system permease [Brucella suis bv. 4 str. 40]
          Length = 226

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 78/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I+ +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|77457202|ref|YP_346707.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77381205|gb|ABA72718.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 365

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A++AE+VR GL A+P+GQ EAA A+GL + +A  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILPQALKLVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|323350416|ref|ZP_08086079.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123353|gb|EFX95031.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 521

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|291279628|ref|YP_003496463.1| polar amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754330|dbj|BAI80707.1| polar amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 291

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 77/125 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS Y +A+I+EIV+  ++A+ + Q+++A +LG+   +  + ++LPQAM  IIPPLT Q
Sbjct: 167 LALSLYESAYISEIVKGAILAIKKEQIDSAKSLGMNKWQRLKYIILPQAMPLIIPPLTGQ 226

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++ +K+S++   +   +L   G  ++  T    EI +I   IYL ++ +++ F + L  
Sbjct: 227 MVSTIKDSAILSVISIPELTFQGMELMASTYLIFEIWIIITVIYLLINTILSHFSSFLEK 286

Query: 391 KIALK 395
           ++  K
Sbjct: 287 RMTTK 291



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 8/79 (10%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E D  IVP          I++G +NT  ++   +I +TIIG + G  + S N     I  
Sbjct: 51  EKDGKIVP--------NVIMIGVINTLKISIYSIILSTIIGFIFGIMKASKNTFFRLISI 102

Query: 131 VYVEVFRNIPPLVVIFFLY 149
            YVE  RNIP +VVIF +Y
Sbjct: 103 SYVESIRNIPSIVVIFVVY 121


>gi|222823907|ref|YP_002575481.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family
           [Campylobacter lari RM2100]
 gi|222539129|gb|ACM64230.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter lari RM2100]
          Length = 260

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 13/163 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           L+ G P LV I L Y +  D   LG  N ++ G  +          L+ + +A+I EI R
Sbjct: 106 LVRGTPLLVQILLIYYIFADN--LGLDNRYVCGVLI----------LALFASAYICEIFR 153

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+++V + Q E+A ALGL+  +  + V+ PQA+++I+ PL+ Q  NL+K+SSL   +  
Sbjct: 154 AGILSVDKMQYESAKALGLSEFEIYKSVIFPQALKNILAPLSGQLSNLIKDSSLLSVIAI 213

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++L      I   T   +EI +     YL L++ I++F  +L 
Sbjct: 214 SELTQNAQEINAFTFSTLEIYIPLALCYLVLTLPISMFSRKLE 256


>gi|111017823|ref|YP_700795.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110817353|gb|ABG92637.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 311

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 71/116 (61%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI+R G+ +V  GQ +AA ALG+   +  R V+LPQAMR ++PP  +Q +++LK 
Sbjct: 176 AAYMAEIIRGGIGSVDNGQYDAAQALGMNKTQLMRRVILPQAMRVVLPPTGNQVISMLKG 235

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++L   +  +DL+     I +   Q I ++++    YL ++ +++ F ++L    A
Sbjct: 236 TTLVSVLAISDLLYSAQIIYSLNYQTIPLLIVASLWYLLMTTILSFFQDKLEKHYA 291



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 5/92 (5%)

Query: 79  YTSDSSY--ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +T  SSY  A  IL G V T  L    M     +GTL+   RLS N +V  I R Y+  F
Sbjct: 60  WTVVSSYLFAPEILRGVVLTIILTIVSMTAGISLGTLLAVMRLSDNPIVNSISRGYIWFF 119

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           R  P LV + F Y   ++ L  P  SI +PFG
Sbjct: 120 RGTPLLVQLIFWYN--IAAL-YPTISIGIPFG 148


>gi|17988945|ref|NP_541578.1| cystine transport system permease protein [Brucella melitensis bv.
           1 str. 16M]
 gi|17984778|gb|AAL53842.1| cystine transport system permease protein [Brucella melitensis bv.
           1 str. 16M]
          Length = 244

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 107 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 167 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 226

Query: 386 NRLNAK 391
            RL  +
Sbjct: 227 VRLERR 232


>gi|26988034|ref|NP_743459.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982754|gb|AAN66923.1|AE016320_11 general amino acid ABC transporter, permease protein [Pseudomonas
           putida KT2440]
 gi|313500472|gb|ADR61838.1| AapM [Pseudomonas putida BIRD-1]
          Length = 365

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           PE MS        I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QA++ +IP + + ++ L K++SL + +G  DL++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315


>gi|327191793|gb|EGE58795.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CNPAF512]
          Length = 226

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 111/206 (53%), Gaps = 20/206 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247
           + SF  G++L L  T ++R F    G A P++ ++ F ++   G P LV +   + + + 
Sbjct: 28  LLSFTFGLILGL-VTAIARLF----GPA-PVVVVARFYVWVIRGTPLLVQL---FVIFYG 78

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ 
Sbjct: 79  LPSIG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSW 130

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T + + + 
Sbjct: 131 RQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILY 190

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    IYL LS +++    RL  + A
Sbjct: 191 IEAALIYLVLSSILSQLQVRLERRFA 216


>gi|331267034|ref|YP_004326664.1| ABC transporter-amino acid transport; amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
 gi|326683706|emb|CBZ01324.1| ABC transporter-amino acid transport; amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
          Length = 522

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145
           T  ++  G I   IIG  +G  R   LS NK       LV WI  VY+E+FR  P +V  
Sbjct: 300 TLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEIFRGTPMIVQS 359

Query: 146 FFLY 149
             +Y
Sbjct: 360 MVIY 363


>gi|323698008|ref|ZP_08109920.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457940|gb|EGB13805.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 237

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 84/146 (57%), Gaps = 6/146 (4%)

Query: 259 GSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G   +P+  ++  +AL   + A+ AEI+R+G+ ++ +GQMEAA + GL+H +A   V+LP
Sbjct: 85  GDGFTPDPLITGIVALGINSGAYNAEIIRAGIQSINKGQMEAARSTGLSHTQAMFHVILP 144

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA++ +IPPL ++ + LLK+SSL   +G A+L+     +  +    +  ++    IYL L
Sbjct: 145 QALKRMIPPLGNELIVLLKDSSLISTIGVAELMFTAKVLGARYYTYVPFLVGVGCIYLVL 204

Query: 378 SIMIALFMNRLNAKI-----ALKEKK 398
           +   +   N L  K+     A  EKK
Sbjct: 205 TFGFSRLFNALERKLSAGSGARTEKK 230



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 27/54 (50%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  + F  +     +G L G GR+S    +  I  VY++V R  P L+ IFF Y
Sbjct: 20  TLQVTFGALALGLFLGILAGTGRISRRVQIRVIADVYIQVIRGTPMLLQIFFFY 73


>gi|311106716|ref|YP_003979569.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 10 [Achromobacter
           xylosoxidans A8]
 gi|310761405|gb|ADP16854.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 10
           [Achromobacter xylosoxidans A8]
          Length = 229

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 76/128 (59%), Gaps = 10/128 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P L       G  +S  F +L  AL  Y +A+++E++RSG+ 
Sbjct: 70  GMPLLMLIFWAY---FVVPKLT------GQVIS-GFWTLIFALVVYESAYLSEVIRSGIE 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ+EA+ +LG+ +    R V+LPQA+ +++P +TSQ+++ +K +SL   +   +L 
Sbjct: 120 AVPRGQIEASRSLGVGYWTTMRRVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELT 179

Query: 351 SVGGTIIN 358
                + N
Sbjct: 180 FAANQVNN 187


>gi|306825868|ref|ZP_07459207.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432229|gb|EFM35206.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 522

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGR---LSANK-------LVAWICRVYVEVFRNIPPLVVI 145
           T  ++  G I   IIG  +G  R   LS NK       LV WI  VY+E+FR  P +V  
Sbjct: 300 TLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEIFRGTPMIVQS 359

Query: 146 FFLY 149
             +Y
Sbjct: 360 MVIY 363


>gi|288904530|ref|YP_003429751.1| ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus gallolyticus
           UCN34]
 gi|306830524|ref|ZP_07463692.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977501|ref|YP_004287217.1| inner membrane amino-acid ABC transporter permease yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|288731255|emb|CBI12805.1| putative ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus gallolyticus
           UCN34]
 gi|304427318|gb|EFM30422.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177429|emb|CBZ47473.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 523

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 494


>gi|209528046|ref|ZP_03276526.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
 gi|209491532|gb|EDZ91907.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
          Length = 405

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 8/113 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +++A++AE VR GL A+PRGQ EAA ALGL       L++LPQA++  IP +  Q
Sbjct: 276 VGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGLNPALTMVLIILPQALKISIPSIVGQ 335

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYL 375
           +++L ++++L   VG  +L+ +  +I+      G+  E+     +L W+F YL
Sbjct: 336 FISLFQDTTLLAIVGLVELLGISRSILANPQFLGRYAEVYLFLGVLYWLFCYL 388


>gi|118444293|ref|YP_878646.1| amino acid ABC transporter, permease component [Clostridium novyi
           NT]
 gi|118134749|gb|ABK61793.1| amino acid ABC transporter, permease component [Clostridium novyi
           NT]
          Length = 215

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 77/128 (60%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  + A+++EI+R G+I++ +GQ EA  ALG T+ +    V+LPQA R I+P + ++
Sbjct: 91  IGLSLNSGAYMSEIIRGGIISIDKGQFEACKALGFTNIQTMTKVILPQAFRVILPSVGNE 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK++SL  A+   +L+      ++ TG+ +E  L+   +YL   +M  +F    N 
Sbjct: 151 FITMLKDTSLVSAITMEELMRNAQLQMSSTGRPVEPFLMAGLLYL---LMTTVF----NI 203

Query: 391 KIALKEKK 398
             +L EK+
Sbjct: 204 IFSLTEKR 211



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+    +L G V T  L    +I  + IG +V   +LS NK++ +I   Y  +FR  P  
Sbjct: 7   SNMLPVLLKGSVITIELTVISVILGSFIGVIVAGLKLSNNKIIVYIISFYTWIFRGTPMF 66

Query: 143 VVIFFLY 149
           + +FF Y
Sbjct: 67  LQLFFFY 73


>gi|120609705|ref|YP_969383.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120588169|gb|ABM31609.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 217

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ ++ RGQ EAA  LG+T+ +  R ++LPQ +R I
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEAAKVLGMTYGQTMRRIVLPQMVRRI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   DL+     I+ +       ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFLVAAAF-YLVMTLVLTW 203

Query: 384 FMNRLNAKIALKE 396
              RL  + A  +
Sbjct: 204 GFQRLERRYARHD 216


>gi|28868468|ref|NP_791087.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213967084|ref|ZP_03395233.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301386370|ref|ZP_07234788.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302062366|ref|ZP_07253907.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302133058|ref|ZP_07259048.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28851706|gb|AAO54782.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213927926|gb|EEB61472.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331015250|gb|EGH95306.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 365

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + +A  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRAMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|16264848|ref|NP_437640.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|15140987|emb|CAC49500.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
          Length = 549

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 15/150 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251
           VL I+L L       + H +     PL   S F+   I G+P LV++     L+   P+ 
Sbjct: 354 VLAIILGLLT--FGGYLHRRH----PLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402

Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G   +   G    P  M   +A++   +A++AEI RSG+ A+P GQ+EAA ++GL   + 
Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            RLV+LPQA R IIPPL ++ + +LK++SL
Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSL 492


>gi|298294199|ref|YP_003696138.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930710|gb|ADH91519.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 214

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F  G V+SL    L   F    G+ + L Y+  F   G P L+ + L Y   F   ++G
Sbjct: 27  AFAGGAVVSLILLSLRLAFPRVAGRPVHL-YVQVFQ--GTPLLMQLFLVY---FGLALMG 80

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                     +   ++  + LS Y++A++ E     ++AVP+GQ EA+ +LGL H +   
Sbjct: 81  --------IQTTPLLAASLCLSVYSSAYLTETWYGCVLAVPKGQWEASSSLGLPHWQQML 132

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L++LPQA+R  +PP     + ++KN+SLA  VGF +L      I N T +         F
Sbjct: 133 LIILPQALRLSVPPTVGLMVQIVKNTSLASIVGFVELTRASQIIANATFEPFLAYGAVAF 192

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           IY  +   I+L    L  +I
Sbjct: 193 IYFVICFSISLCGRHLEKRI 212


>gi|262368885|ref|ZP_06062214.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
 gi|262316563|gb|EEY97601.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
          Length = 227

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 76/134 (56%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+    +S  +A   + AA+ +EIVR+G+ ++P+GQ  AA ALG+T+ ++ RL++LPQA 
Sbjct: 94  TIDTALVSSIVAFMLFEAAYFSEIVRAGIQSIPKGQSAAAYALGMTYGQSMRLIILPQAF 153

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R + P L  Q + L ++S++  A+G  D         +      + IL    +Y ++S++
Sbjct: 154 RKMTPLLLQQTIILFQDSTMVYAIGLLDFFRTNYVRGDLMSLLTQYILFAGLVYFTISML 213

Query: 381 IALFMNRLNAKIAL 394
               + RL  ++++
Sbjct: 214 ATYAVKRLQRRLSV 227


>gi|209518061|ref|ZP_03266891.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501467|gb|EEA01493.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 250

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 78/135 (57%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +GQF  I  S + P     +M   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  MGQFGIIRESFMWPVLRDPYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMI 381
            +    IYL L+ +I
Sbjct: 198 FICAALIYLFLNFVI 212


>gi|70728432|ref|YP_258181.1| general amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68342731|gb|AAY90337.1| general amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 365

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A++AE+VR GL A+P+GQ EAA A+GL + +A  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILPQALKLVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|330808726|ref|YP_004353188.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376834|gb|AEA68184.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 220

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 112/208 (53%), Gaps = 22/208 (10%)

Query: 193 SFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           S  +G V+ L   FA  LS+H   +  + L  +Y++  +I   P LVLI L Y   F  P
Sbjct: 31  SIAIGCVIGLAMAFAL-LSKH---RILRVLASVYVT--VIRNTPILVLILLIY---FALP 81

Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            LG + + +      P F+   I LS Y  A++ E+ R GL+++ +GQ EA +A+GL   
Sbjct: 82  SLGIRLDKL------PSFV---ITLSLYAGAYLTEVFRGGLLSIHKGQREAGLAIGLGEW 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    + +P  +R+++P L++ +++L K++SLA A+   +L      I  ++ + IE  L
Sbjct: 133 QVKAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYYARKINVESYRVIETWL 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +Y++   +IA+ +     ++A++ 
Sbjct: 193 VTTALYVAACYLIAMVLRYFEQRLAIRR 220


>gi|285808423|gb|ADC35949.1| putative amino acid ABC transporter permease/substrate binding
           protein [uncultured bacterium 98]
          Length = 133

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 69/126 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  I L    AA+ +EI R  L+AVPRGQ++AA  LGLT R+  RLV  PQA R  
Sbjct: 2   PAFLAALIGLGLNYAAYESEIYRGALLAVPRGQLDAARTLGLTERQILRLVRGPQAFRLA 61

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + P+T+ ++ LLK+SSL   +   +L        +  G  +    +   +YL LS+ +A 
Sbjct: 62  LAPMTNDFIALLKDSSLVSVITVVELTKQTSIFASNIGSWVVPGAMCAAMYLVLSLPLAR 121

Query: 384 FMNRLN 389
              R+ 
Sbjct: 122 LARRIE 127


>gi|257487795|ref|ZP_05641836.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331008516|gb|EGH88572.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 220

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|225629164|ref|ZP_03787197.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|261323080|ref|ZP_05962277.1| amino acid ABC transporter permease [Brucella neotomae 5K33]
 gi|261756882|ref|ZP_06000591.1| cystine transport system permease [Brucella sp. F5/99]
 gi|225615660|gb|EEH12709.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|261299060|gb|EEY02557.1| amino acid ABC transporter permease [Brucella neotomae 5K33]
 gi|261736866|gb|EEY24862.1| cystine transport system permease [Brucella sp. F5/99]
          Length = 250

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 113 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232

Query: 386 NRLNAK 391
            RL  +
Sbjct: 233 VRLERR 238


>gi|125718753|ref|YP_001035886.1| amino acid ABC transporter permease/amino acid-binding protein
           [Streptococcus sanguinis SK36]
 gi|125498670|gb|ABN45336.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein, putative [Streptococcus sanguinis SK36]
          Length = 521

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFVLT 488



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|157157239|ref|YP_001463222.1| L-cystine ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|157079269|gb|ABV18977.1| L-cystine ABC transporter, permease protein [Escherichia coli
           E24377A]
          Length = 222

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +        P+ +++ F I       LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIW--------PVRWMARFYISIFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWMARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|312883095|ref|ZP_07742826.1| ABC transporter: Transmembrane protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369255|gb|EFP96776.1| ABC transporter: Transmembrane protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 297

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 77/145 (53%)

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D+    Q  F G   +    +S  + +   ++A+IAEI+R+GL  V +GQ EAA +LGL+
Sbjct: 146 DEVSSWQLIFFGPPNLWENLLSGVLCVGFLSSAYIAEIIRAGLDGVAKGQWEAADSLGLS 205

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +    R ++ PQ + S+ P L  Q ++L+K++S+   +   ++  VG  I N +G   EI
Sbjct: 206 NWVKYRYIIAPQVIASVTPTLAGQAISLVKDTSIVSLISIQEMTFVGTEIANSSGLIFEI 265

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            LI    Y  L + +++    L  K
Sbjct: 266 WLIIGLFYFLLCLSLSVTFKSLEKK 290


>gi|220913575|ref|YP_002488884.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219860453|gb|ACL40795.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 263

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 78/131 (59%), Gaps = 4/131 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+L    +A+IAE +R+GL AVP+GQ+EAA +LG+   +A   +++PQA + ++PPLT++
Sbjct: 133 ISLGIVASAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVTIVIPQAFKIVLPPLTNE 192

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K+SSL   +G      +L   G   I+  G  +  +L+    YL ++I ++L   
Sbjct: 193 VILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFYLVVTIPLSLLAR 252

Query: 387 RLNAKIALKEK 397
           +  ++ A  ++
Sbjct: 253 KFESRSARTKR 263


>gi|326804127|ref|YP_004321945.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650473|gb|AEA00656.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 495

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 4/126 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+S   AA+I+EI R G+++V RGQ+EAA +LGL +    + V+ PQ++R + P L ++
Sbjct: 370 IAVSLNAAAYISEIFRGGILSVDRGQVEAARSLGLNYWTTMKKVVFPQSLRPVWPSLVNE 429

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMN 386
              L+K+SS+   +G A+L      + + T Q    + I M  Y  L    S+ + L+ N
Sbjct: 430 AATLIKDSSIVSTIGVAELTFQTRAVTSLTYQGTIPLFISMCCYFVLTFVTSMALRLYEN 489

Query: 387 RLNAKI 392
           ++ AK+
Sbjct: 490 KMQAKV 495


>gi|167035541|ref|YP_001670772.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862029|gb|ABZ00437.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 365

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           PE MS        I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QA++ +IP + + ++ L K++SL + +G  DL++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315


>gi|113869257|ref|YP_727746.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113528033|emb|CAJ94378.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 217

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ EA+ ALG+T+ +  R V+LPQ +  +
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRVVLPQMVSRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++  +F YL +++++  
Sbjct: 145 LPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAALF-YLVMTLILTW 203

Query: 384 FMNRLNAKIALKEK 397
           F   L  + A  + 
Sbjct: 204 FFQNLEKRYAKHDD 217


>gi|90409068|ref|ZP_01217193.1| amino acid ABC transporter, permease protein [Psychromonas sp.
           CNPT3]
 gi|90309825|gb|EAS37985.1| amino acid ABC transporter, permease protein [Psychromonas sp.
           CNPT3]
          Length = 359

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 60/82 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE++R GL A+P+GQ EAA +LGL++ K   L++LPQA++  IP L   
Sbjct: 231 IGITLFQSAYIAEVIRGGLQAIPKGQYEAAKSLGLSYWKGMLLIILPQALKISIPNLVGS 290

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           +++L K+++L + +G  D++++
Sbjct: 291 FISLFKDTTLVLIIGLFDVLAM 312


>gi|73542697|ref|YP_297217.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72120110|gb|AAZ62373.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 217

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ EA+ ALG+T+ +  R V+LPQ +  +
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMTYFQTMRRVVLPQMVSRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++  +F YL +++++  
Sbjct: 145 LPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAALF-YLLMTLILTW 203

Query: 384 FMNRLNAKIALKEK 397
           F   L  + A  + 
Sbjct: 204 FFQNLEKRYAKHDD 217


>gi|23098332|ref|NP_691798.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776558|dbj|BAC12833.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 230

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 70/122 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+IAEI RS L +V RGQ E+A AL +T+    R ++LPQA R  IPPLT+ +++++K
Sbjct: 109 SAAYIAEINRSSLNSVDRGQWESAKALNMTYWHTLRKIILPQATRIAIPPLTNVFMDIVK 168

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +SL   +   +L      +  +   A+ + ++   IY  + I+I +   RL  + ++  
Sbjct: 169 ATSLTAVITVPELFQKAQIVTGREFDAMTVYILVALIYWPICILIGMLQERLEKRYSVYV 228

Query: 397 KK 398
            K
Sbjct: 229 AK 230



 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 29/61 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +A +GM    I G  +   R S   L+ W  R+Y+   R  P LV +F +
Sbjct: 25  ILEGLPYTIMIAVAGMAIGLIFGLFLALARDSKTILLRWPSRIYISFMRGTPMLVFLFII 84

Query: 149 Y 149
           Y
Sbjct: 85  Y 85


>gi|330950140|gb|EGH50400.1| amino acid ABC transporter ATP-binding protein [Pseudomonas
           syringae Cit 7]
          Length = 403

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 14/178 (7%)

Query: 185 TNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           T  ++ V S+  G+ L   L + RLS H   +   +L   YI  +L   +P LVL+   Y
Sbjct: 23  TVVQLSVLSWTAGLALGFLLASARLSTHAWLRVPASL---YI--WLFRSIPLLVLLVFVY 77

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L        Q      S +S  F S  IAL     A++AEI R GL++V +GQ EAA A
Sbjct: 78  NLP-------QLFPASSSVLSQPFYSGLIALVLTETAYMAEIHRGGLLSVLKGQREAARA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           LG+    A RLV++PQA+R  +P LT++Y+ ++K +SL   +   +L+ VG  +  Q 
Sbjct: 131 LGIRGLGAQRLVVIPQAIRISLPTLTNEYVTIVKLTSLVSVISLNELLLVGQRLYAQN 188


>gi|169631316|ref|YP_001704965.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC
           19977]
 gi|169243283|emb|CAM64311.1| Putative amino acid ABC transporter, permease protein
           [Mycobacterium abscessus]
          Length = 293

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 76/128 (59%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ +  A+ AEI+R G+++V  GQ+EAA ALG+  R+    ++LPQAMRS++P   ++
Sbjct: 166 IGLTLHQGAYFAEIIRGGILSVDEGQLEAAAALGIPRRRQFFRIVLPQAMRSVMPNAANE 225

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387
            ++L+K +S+   +  ADL      I  + G+ + ++++   W  +  S+  ++  ++ R
Sbjct: 226 VISLVKGTSIVSTMAIADLFYQVQVIFGRNGRVVPLLMVATAWYIVITSVLTVVQYYIER 285

Query: 388 LNAKIALK 395
             A+ A +
Sbjct: 286 HYARGAHR 293


>gi|157165564|ref|YP_001467259.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter concisus 13826]
 gi|112801999|gb|EAT99343.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter concisus 13826]
          Length = 236

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 93/152 (61%), Gaps = 16/152 (10%)

Query: 249 PVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           PV+ Q   F+ +  +T S  F    IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL
Sbjct: 87  PVILQLLIFSVVIFATWSDNFYVAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGL 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI- 364
            +  + R ++ PQA ++I+P L +++++L K +S+   VG+  +V +  T+ +++ QA+ 
Sbjct: 147 NYYVSMREIVFPQATKNILPALANEFISLFKETSV---VGYISVVDI--TMQSKSLQAVF 201

Query: 365 ----EIILIWMFIYLSL---SIMIALFMNRLN 389
                +I   +  Y+S+   ++++ L   RLN
Sbjct: 202 YSPEPVIFTGIVYYVSVKFFTLLVKLLERRLN 233


>gi|206579195|ref|YP_002238837.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Klebsiella pneumoniae 342]
 gi|290509794|ref|ZP_06549165.1| amino acid ABC transporter ATP-binding protein [Klebsiella sp.
           1_1_55]
 gi|206568253|gb|ACI10029.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Klebsiella pneumoniae 342]
 gi|289779188|gb|EFD87185.1| amino acid ABC transporter ATP-binding protein [Klebsiella sp.
           1_1_55]
          Length = 506

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG +L+L A +  R +     +    LYI  +L   +P LVL+   Y +    P   
Sbjct: 35  SIVLGFILAL-AKQSPRGWLSTPAR----LYI--WLFRSMPLLVLLIFVYNMPQALPSFA 87

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    ++  F +  +A+    AA+IAEI R GL+++PRGQ EAA ALGL +     
Sbjct: 88  -------PVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQW 140

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V++PQA+R  +P L ++Y+ ++K SSL   +   +++ VG  + +Q    +E +    F
Sbjct: 141 RVIIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQQLYSQNFLVMETMTAVAF 200

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
            Y+ +  +    + RL   + + ++ 
Sbjct: 201 YYIFIVTVFDFLLKRLENYLDVTQRN 226


>gi|205372795|ref|ZP_03225605.1| amino acid ABC transporter (permease) [Bacillus coahuilensis m4-4]
          Length = 230

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 78/128 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IA S    A+ +EIVR+ + ++P+GQ EA  ++G+T+R+  + ++LPQA R  IP
Sbjct: 98  FPSAVIAFSLNVGAYASEIVRASIESIPKGQWEAGYSVGMTYRQTLKRIVLPQAARVSIP 157

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA  V  A++      I     Q + + +   F+Y  +  ++++  
Sbjct: 158 PLSNTFISLVKDTSLASLVLVAEMFRKAQEIAATNYQFLLVYMEAAFLYWVICFILSIAQ 217

Query: 386 NRLNAKIA 393
           +R+  +++
Sbjct: 218 DRIEIRLS 225


>gi|163839929|ref|YP_001624334.1| glutamate transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162953405|gb|ABY22920.1| glutamate transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 512

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/88 (46%), Positives = 62/88 (70%), Gaps = 3/88 (3%)

Query: 263 SPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +P F+ L I ALS YTA +++E +R+G+  VP GQ EA+ A+GL   +   LV+LPQA R
Sbjct: 81  NPGFVPLAIIALSLYTATYVSEAIRAGINTVPVGQAEASRAIGLPFGQTMSLVILPQAFR 140

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++PP+ S ++ LLKN++  VA GF+ L
Sbjct: 141 AVVPPMMSVFIALLKNTT--VAAGFSVL 166



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 90/166 (54%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           V S +LG+VL++      R      G      +A+PLL +   + +GLP+          
Sbjct: 295 VGSLILGMVLAVGRLSDRRWISVPVGWFTELFRAVPLLILMALMFYGLPS---------- 344

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       IG   ++P F+++ + L  Y  + +AE++R+G++AVP+GQ EAA A+G
Sbjct: 345 ------------IGFQGMTP-FIAVVVGLILYNGSVLAEVIRAGILAVPKGQSEAAYAIG 391

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           L   +   ++LLPQA+R+++P + +Q +  LK+++L   + + +L+
Sbjct: 392 LRKTRVMTMILLPQAVRTMLPVIIAQLVVALKDTALGFIITYQELL 437


>gi|328543626|ref|YP_004303735.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
 gi|326413370|gb|ADZ70433.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 385

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 62/87 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL + +   L++LPQA++ +I
Sbjct: 247 KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRYWQMMGLIILPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351
           P + + ++ L K+++L + VG  DL+ 
Sbjct: 307 PGIVNTFIGLFKDTTLVLIVGMFDLLG 333


>gi|294787060|ref|ZP_06752314.1| glutamate permease [Parascardovia denticolens F0305]
 gi|315226710|ref|ZP_07868498.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Parascardovia denticolens DSM 10105]
 gi|294485893|gb|EFG33527.1| glutamate permease [Parascardovia denticolens F0305]
 gi|315120842|gb|EFT83974.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Parascardovia denticolens DSM 10105]
          Length = 229

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 79/130 (60%), Gaps = 8/130 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS YTA+F++E +RSG+  +P GQ EA+ ALGLT  ++   V+LPQA+R  I PL +  
Sbjct: 103 GLSLYTASFVSESLRSGINTIPVGQAEASRALGLTFFQSITSVILPQALRGSIAPLGNTL 162

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMN 386
           + LLKNS++A A   A + +   +++++       Q ++I L++   Y+ L I I L   
Sbjct: 163 IALLKNSTVAAA---ASVTTETSSLMSEMLEFHPSQIVQIFLVFALGYVILIIPIGLLTT 219

Query: 387 RLNAKIALKE 396
            L+ ++A++ 
Sbjct: 220 YLSNRLAVRR 229


>gi|261213026|ref|ZP_05927310.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260838091|gb|EEX64768.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 298

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLSLSMLFKQVEKR 291


>gi|238793404|ref|ZP_04637029.1| Glutamine transport system permease protein glnP [Yersinia
           intermedia ATCC 29909]
 gi|238727177|gb|EEQ18706.1| Glutamine transport system permease protein glnP [Yersinia
           intermedia ATCC 29909]
          Length = 189

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 60  FSAAVVTIIINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLP 119

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  +
Sbjct: 120 PLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVL 179

Query: 386 NRLNAKIAL 394
            RL  K+ +
Sbjct: 180 RRLERKLKI 188


>gi|225571603|ref|ZP_03780599.1| hypothetical protein CLOHYLEM_07701 [Clostridium hylemonae DSM
           15053]
 gi|225159680|gb|EEG72299.1| hypothetical protein CLOHYLEM_07701 [Clostridium hylemonae DSM
           15053]
          Length = 230

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 20/210 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-----LPLLYISTFLIFGLPTLVLIALKY 242
           KI  F+ ++GI L  F   + R  +++TGK      L  LY++  +I G P +V + + Y
Sbjct: 31  KITFFAVLIGIALG-FLVAIVRSTYDRTGKLKILNLLCKLYLT--VIRGTPVVVQLLIIY 87

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            + F            GS    + +   +A    + A++AEI RSG++++  GQ EA  +
Sbjct: 88  FVIF------------GSMDIDKVIVAVLAFGINSGAYVAEIFRSGIMSIDNGQFEAGRS 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG  + +    +++PQA ++++P L ++++ LLK +S++  +   DL   G  I +QT  
Sbjct: 136 LGFNYTQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSGYIAMQDLTKGGDIIRSQTFD 195

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A   ++    IYL++ ++    +N L  ++
Sbjct: 196 AFMPLIGVALIYLAMVLIFTKLVNMLERRL 225


>gi|317047450|ref|YP_004115098.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949067|gb|ADU68542.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 290

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 83/138 (60%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           TV   F++  + LS    A+ +E+VR+GL++V  GQ EAA A+G+   +A + ++LPQAM
Sbjct: 151 TVMTPFLAALLGLSINQGAYTSEVVRAGLLSVDTGQYEAAKAIGMPRLQALQRIILPQAM 210

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R I+PP+ +++++++K +SLA  + +++L+     I     + +E++ +    YL +  +
Sbjct: 211 RVILPPVGNEFISMIKTTSLASMIQYSELLYNTQNIYFANARVMELLFVAGIWYLIVVTV 270

Query: 381 IALFMNRLNAKIALKEKK 398
           ++   ++L    +   ++
Sbjct: 271 LSFGQSQLERYFSRGHRR 288


>gi|152970013|ref|YP_001335122.1| putative ATP-binding component of a transport system [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|288935767|ref|YP_003439826.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|150954862|gb|ABR76892.1| putative ATP-binding component of a transport system [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|288890476|gb|ADC58794.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 506

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 14/206 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG +L+L A +  R +     +    LYI  +L   +P LVL+   Y +    P   
Sbjct: 35  SIVLGFILAL-AKQSPRGWLSTPAR----LYI--WLFRSMPLLVLLIFVYNMPQALPSFA 87

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    ++  F +  +A+    AA+IAEI R GL+++PRGQ EAA ALGL +     
Sbjct: 88  -------PVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQW 140

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V++PQA+R  +P L ++Y+ ++K SSL   +   +++ VG  + +Q    +E +    F
Sbjct: 141 RVIIPQALRVALPALANEYIAIVKLSSLVSVISLTEILMVGQQLYSQNFLVMETMTAVAF 200

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
            Y+ +  +    + RL   + + ++ 
Sbjct: 201 YYIFIVTVFDFLLKRLENYLDVTQRN 226


>gi|325689080|gb|EGD31088.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 521

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAVIYFILT 488



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|284048143|ref|YP_003398482.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
 gi|283952364|gb|ADB47167.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
          Length = 231

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 56/81 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L  Y  A++AE++R+G+ AVPRGQ EAA A G  + +    ++LPQ ++ I+PP  +Q
Sbjct: 98  VSLGLYHGAYMAEVIRAGIEAVPRGQFEAADAQGFNYTQKMAYIILPQTVKIILPPTVNQ 157

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
             NL+KN+++   +G ADL+S
Sbjct: 158 IGNLIKNTAVLYIIGGADLIS 178



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF  T   A  G++ AT++G L+G   +S+ +L   I R+YVE  +N P ++ +  LY
Sbjct: 23  GFSVTVESAIGGILIATVLGILLGLMGVSSKRLPHAINRIYVEAIQNTPLILQLCLLY 80


>gi|227550833|ref|ZP_03980882.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|293379248|ref|ZP_06625394.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|293573051|ref|ZP_06683992.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E980]
 gi|227180028|gb|EEI61000.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|291606870|gb|EFF36251.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E980]
 gi|292642044|gb|EFF60208.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 530

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222
           MFL   GL+     + T     V    LG+++ +F         L+R F +K G AL  +
Sbjct: 300 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 353

Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           Y+  F   G P +V        +AL + +  ++ +                 +L+I +S 
Sbjct: 354 YVEIFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 394

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++ EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +
Sbjct: 395 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 454

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++++   +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 455 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511


>gi|261343375|ref|ZP_05971020.1| arginine ABC transporter, permease protein ArtQ [Providencia
           rustigianii DSM 4541]
 gi|282568515|gb|EFB74050.1| arginine ABC transporter, permease protein ArtQ [Providencia
           rustigianii DSM 4541]
          Length = 246

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 25/198 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIAL------------KYQLHFDKPVL----GQFNFIGGS 260
           + LP L +  F+ FG  TL LI L            +  L  D  +     GQF++    
Sbjct: 55  RGLPELLVVLFVYFG--TLQLINLLGDGIAINLGFWQGTLQVDPSIFFADSGQFDY---- 108

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
             +P F+   IAL+   A++ ++ +R  L AVP GQ EA +ALGLT R      ++PQ  
Sbjct: 109 --TP-FVCGVIALALLYASYASQTLRGALKAVPYGQWEAGLALGLTKRTIFFRFIMPQMW 165

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L +Q+L LLK+++L   +   DL+    TI+N+T +      I   IYL+++++
Sbjct: 166 RHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLL 225

Query: 381 IALFMNRLNAKIALKEKK 398
             L + R+  +    E+ 
Sbjct: 226 SQLVLKRIELRTTRFERS 243


>gi|293364251|ref|ZP_06610977.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|291317097|gb|EFE57524.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
          Length = 543

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 405 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 464

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 465 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 513


>gi|289522552|ref|ZP_06439406.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504388|gb|EFD25552.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 221

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYI 224
           S PTL      T+     I     VLG++L+   T      R+    +++  +++P L +
Sbjct: 11  SLPTLLEGTFVTIKLTILIVAMGLVLGLILAFCQTYGSKTLRIVVAVYDRIFRSIPELVL 70

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              + +G+P +                       G  +SP F +  +AL    AA++ +I
Sbjct: 71  LLLVFYGMPGI-----------------------GLRLSP-FYAAVVALGLRAAAYMGQI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   ++V   Q+ AA +LG++  KA   V+ PQAMR+ IPP  ++Y  +LK++SLA A+
Sbjct: 107 FRGSFMSVGSDQLTAAYSLGMSEYKAFIYVIFPQAMRAFIPPFANEYAIILKDTSLAYAI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           G  +L+  G  II    + + I L    IY  L+  +A
Sbjct: 167 GVVELLRQGQYIITVEYEPLPIFLAIAGIYFVLTFGVA 204


>gi|209547509|ref|YP_002279427.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538753|gb|ACI58687.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 324

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI RSG+ ++ RGQ EA+ ++G       R ++LPQA+  IIPP  +Q
Sbjct: 197 LALSLCYGAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQ 256

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++++LK+SSL   +G  +L+ +  T+  +T Q +E+++    +Y  +SI + L   R+  
Sbjct: 257 FISMLKDSSLVSVIGVWELMFLARTLGQKTFQHMEMLISAAMLYWIMSICLELIQARIER 316

Query: 391 KIALKEKK 398
             A  + +
Sbjct: 317 HYARSKVR 324


>gi|110678763|ref|YP_681770.1| amino acid ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109454879|gb|ABG31084.1| amino acid ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 432

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 16/192 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +R L    L M         S  LGIVL+L      R       K + +++I    I G+
Sbjct: 219 SRDLGGFMLNMMLGVTCVSLSVPLGIVLAL-----GRQSSMPLIKWICVIFIE--FIRGV 271

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P + L+       F   V+  + F   STV   F+ + I ++ +++A+IAE++R GL A+
Sbjct: 272 PLITLL-------FVASVMLAYFFPPESTVD-LFLRVVIMITMFSSAYIAEVIRGGLAAL 323

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS- 351
           P+GQ E A +LGL + +ATRL++LPQA++  IP + +  + L K+++L   +   DLV  
Sbjct: 324 PKGQYEGADSLGLDYAQATRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGM 383

Query: 352 VGGTIINQTGQA 363
           + G I+  T  A
Sbjct: 384 IRGPILASTDWA 395


>gi|312973871|ref|ZP_07788043.1| L-cystine transport system permease protein tcyB [Escherichia coli
           1827-70]
 gi|310332466|gb|EFP99701.1| L-cystine transport system permease protein tcyB [Escherichia coli
           1827-70]
          Length = 222

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWLVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 39.7 bits (91), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS   LV W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWLVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|326315799|ref|YP_004233471.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323372635|gb|ADX44904.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 217

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ ++ RGQ EAA  LG+T+ +  R ++LPQ +R I
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEAAKVLGMTYGQTMRRIVLPQMVRRI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   DL+     I+ +       ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPFLVAAAF-YLVMTLVLTW 203

Query: 384 FMNRLNAKIALKE 396
              RL  + A  +
Sbjct: 204 GFQRLERRYARHD 216


>gi|257887913|ref|ZP_05667566.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257893286|ref|ZP_05672939.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257896470|ref|ZP_05676123.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257823967|gb|EEV50899.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257829665|gb|EEV56272.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257833035|gb|EEV59456.1| amino acid ABC transporter [Enterococcus faecium Com12]
          Length = 526

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 38/237 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLL 222
           MFL   GL+     + T     V    LG+++ +F         L+R F +K G AL  +
Sbjct: 296 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRSVPESGNALTRFF-QKIGNALLSI 349

Query: 223 YISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           Y+  F   G P +V        +AL + +  ++ +                 +L+I +S 
Sbjct: 350 YVEIFR--GTPMMVQAMVIFYGLALAFGISLNRTI----------------AALFI-VSL 390

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++ EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +
Sbjct: 391 NTGAYMTEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINI 450

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++++   +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 451 KDTAVLSVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507


>gi|255326763|ref|ZP_05367839.1| L-cystine transport system permease protein TcyB [Rothia
           mucilaginosa ATCC 25296]
 gi|255295980|gb|EET75321.1| L-cystine transport system permease protein TcyB [Rothia
           mucilaginosa ATCC 25296]
          Length = 267

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 58/75 (77%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L   +AA+I+E++R+GL A+P+GQMEAA +LG++H +A   +++PQA R ++PPLT++
Sbjct: 136 LSLGMVSAAYISEVLRAGLQAIPKGQMEAARSLGMSHTRAMISIIIPQAFRVVLPPLTNE 195

Query: 331 YLNLLKNSSLAVAVG 345
            + L K+SSL   +G
Sbjct: 196 VILLTKDSSLVYLLG 210


>gi|148549628|ref|YP_001269730.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148513686|gb|ABQ80546.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 365

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 63/94 (67%), Gaps = 6/94 (6%)

Query: 264 PEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           PE MS        I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 222 PEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QA++ +IP + + ++ L K++SL + +G  DL++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLN 315


>gi|171777495|ref|ZP_02919217.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283205|gb|EDT48629.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 523

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 494


>gi|91228351|ref|ZP_01262279.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus
           12G01]
 gi|262392785|ref|YP_003284639.1| amino acid ABC transporter permease [Vibrio sp. Ex25]
 gi|269965280|ref|ZP_06179401.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus
           40B]
 gi|91188111|gb|EAS74415.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus
           12G01]
 gi|262336379|gb|ACY50174.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
 gi|269830081|gb|EEZ84309.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus
           40B]
          Length = 223

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 96/170 (56%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+      VFS +L ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F  + G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQI--FPLMVGIDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|254224688|ref|ZP_04918304.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125622751|gb|EAZ51069.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
          Length = 298

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLSLSMLFKQVEKR 291



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           L G V T  L+  GM+ A ++G+L+G  R      V      +V++ RNIPPL
Sbjct: 66  LQGLVATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPL 118


>gi|330960988|gb|EGH61248.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 220

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRALEQRLAIRR 220


>gi|323489869|ref|ZP_08095093.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
 gi|323396504|gb|EGA89326.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
          Length = 214

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 37/232 (15%)

Query: 177 SFPTLTMDTNAKIFVFS------FVLGIVLSLFA-------TRLSRHFHEKTGKALPLLY 223
           +FP L       +++F+      F++G++++LF          +++ F +   +  P + 
Sbjct: 7   AFPYLMEGLKVTLYIFAIAIVLGFLIGLIVALFRLAPLKILNWIAKIFVDAI-RGTPFIV 65

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              F+ FGL +L  I+L      D    G                  + ++    A+ +E
Sbjct: 66  QLFFIYFGLNSLAFISL------DNTTAG-----------------IVTVAINAGAYFSE 102

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ +GQ EAA +LGL   +  R ++LPQA R ++P +T+Q +  LK++SL   
Sbjct: 103 IIRAGIQSIDKGQTEAARSLGLNSTQNMRYIVLPQAFRRMLPTITNQAIISLKDTSLLSV 162

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +G ADL   G    + T  A  + LI   IY  +  ++++  N +  K  L+
Sbjct: 163 IGVADLTQEGRIQASATFDAFNVYLILGIIYFVVIYLLSMLANYVERKFVLR 214


>gi|322517586|ref|ZP_08070455.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322123846|gb|EFX95420.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 569

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 439 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 498

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+ +QT Q  +   +   IY  L+  +
Sbjct: 499 INIKDTSVLNVISVVELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTV 547



 Score = 36.2 bits (82), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLS---ANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++  G +  T IG ++G  R +   ANK VA       W+  VY+EVFR  P +V  
Sbjct: 355 TLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEVFRGTPMIVQS 414

Query: 146 FFLY 149
             +Y
Sbjct: 415 MVIY 418


>gi|313885683|ref|ZP_07819432.1| putative glutamine ABC transporter, permease protein GlnP
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619048|gb|EFR30488.1| putative glutamine ABC transporter, permease protein GlnP
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 218

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 24/153 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
            T + LPLL I  F  F LP    I +++ + +             STV+        A+
Sbjct: 60  DTIRNLPLLLIIFFTYFALPQ---IGIRFSVFW-------------STVA--------AM 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S + +  ++EI+RSGL  +P+GQ EA  A GLT  +   L+LLPQA+R++I  + SQ + 
Sbjct: 96  SLFESCMVSEIIRSGLKGLPKGQAEAGYAAGLTTWQVLSLILLPQAVRNMITSIISQLIA 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           L+K++SLA  +   +++     I NQ   AI I
Sbjct: 156 LIKDTSLATIIALPEIMHNAKIIYNQDVSAIII 188


>gi|218510008|ref|ZP_03507886.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 225

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 111/206 (53%), Gaps = 20/206 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247
           + SF  G++L L  T ++R F    G A P++ ++ F ++   G P LV +   + + + 
Sbjct: 27  LLSFTFGLILGL-VTAIARLF----GPA-PVVVVARFYVWVIRGTPLLVQL---FVIFYG 77

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ 
Sbjct: 78  LPSIG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSW 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T + + + 
Sbjct: 130 RQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILY 189

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    IYL LS +++    RL  + A
Sbjct: 190 IEAALIYLVLSSILSQLQVRLERRFA 215


>gi|148239751|ref|YP_001225138.1| ABC-type amino acid transport system permease component
           [Synechococcus sp. WH 7803]
 gi|147848290|emb|CAK23841.1| ABC-type amino acid transport system permease component
           [Synechococcus sp. WH 7803]
          Length = 328

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A   + AA++AE VR GL AVP  Q EAA ALGL   +  RLV+LPQA+R  +P LT+Q
Sbjct: 194 VAFGLFAAAYVAEDVRGGLQAVPPTQSEAAAALGLGPWQIQRLVILPQALRIAVPALTNQ 253

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387
            + LL+N+SL   +G  +L+ +  +++      G+ +E+ +    +Y  L   +AL   +
Sbjct: 254 AVGLLQNTSLMAILGLVELLGISQSLLANPAYIGRHLEVYVWLAALYWLLCTAMALMARQ 313

Query: 388 LNAK 391
              +
Sbjct: 314 FERQ 317


>gi|330823280|ref|YP_004386583.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|329308652|gb|AEB83067.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 223

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 75/127 (59%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I    + AA+ +EI+R+G+ +VPRGQ+ A  ALG+T+ +  +LV+LPQA R+++P L
Sbjct: 95  SAIITFVAFEAAYFSEIMRAGIQSVPRGQVFAGQALGMTYSQNMKLVVLPQAFRNMLPVL 154

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL  A+G  D++          G+ +E  L     Y  +   ++  + R
Sbjct: 155 LTQTIILFQDTSLVYAIGAYDMLKGFDVAGKNFGRPVEAYLAAAVAYFVICYSLSWAVKR 214

Query: 388 LNAKIAL 394
           L+ KIA+
Sbjct: 215 LHKKIAI 221


>gi|308172227|ref|YP_003918932.1| amino acid ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307605091|emb|CBI41462.1| similar to amino acid ABC transporter (permease) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 216

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TL M   A   VF+ + G++L+L         H+     L  +YIS F   G+PTLV + 
Sbjct: 15  TLVMAVAA--MVFAVIGGLILALITKNRIPVLHQ-----LSKVYISFFR--GVPTLVQLF 65

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L Y   +  P L    F G S ++    +  I LS   AA++AEI R+ L +V  GQ+EA
Sbjct: 66  LIY---YGLPQL----FPGMSKMT-ALTAAIIGLSLKNAAYLAEIFRAALNSVDEGQLEA 117

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +++G+T  +A R ++ PQA+R+ +P   + ++ LLK +SLA  +G  ++ + G    + 
Sbjct: 118 CLSVGMTKSQAYRRIIFPQAIRNALPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASG 177

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +  E  L    +Y  L+I+ ++  + L   I+
Sbjct: 178 NLKYFETYLAVAIMYWILTIIYSVLQDLLERAIS 211


>gi|256157635|ref|ZP_05455553.1| amino acid ABC transporter, permease protein [Brucella ceti
           M490/95/1]
 gi|256253390|ref|ZP_05458926.1| amino acid ABC transporter, permease protein [Brucella ceti B1/94]
          Length = 226

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|229154119|ref|ZP_04282244.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 4342]
 gi|228629399|gb|EEK86101.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 4342]
          Length = 230

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + ++ RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q
Sbjct: 89  IALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQ 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++    +N L  
Sbjct: 149 FIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLETYMIVGLYYLVLVLLFTYLVNLLEK 208

Query: 391 KIALKE 396
           ++  KE
Sbjct: 209 RLQRKE 214


>gi|227833204|ref|YP_002834911.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454220|gb|ACP32973.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 292

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 4/130 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA++AEIVRSG+ +VP GQ EA+ ALG+      R  +LPQAMR IIPP  ++
Sbjct: 135 LGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVLPQAMRIIIPPTGNE 194

Query: 331 YLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMN 386
           +++LLK SSL VA+ + A++      I     + I ++++   W     SL ++   F+ 
Sbjct: 195 FISLLKTSSLVVAIPYTAEIFGRATDISAALFEPIPLLMVAATWYLAITSLLMVGQYFLE 254

Query: 387 RLNAKIALKE 396
           R   + A +E
Sbjct: 255 RRFERGATRE 264


>gi|227821878|ref|YP_002825848.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227340877|gb|ACP25095.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 384

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 61/88 (69%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   I +S + +A++AE+VR GL A+P+GQ E A +LGL++ +   L++LPQA++ +I
Sbjct: 247 KFLRALIGVSFFASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMNLIVLPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ L K++SL   +G  DL+ +
Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334


>gi|187934602|ref|YP_001885296.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium botulinum B str. Eklund 17B]
 gi|187722755|gb|ACD23976.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium botulinum B str. Eklund 17B]
          Length = 213

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 30/194 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      + S  LGIV++L  T       + TG      +  PLL     + FGLPT
Sbjct: 17  VTLEVFVLTLILSIPLGIVVALARTSKILMLRKLTGIYVLIMRGTPLLLQIVVIFFGLPT 76

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +        + FD+                 F +  +A     AA+  EI RSG+I++ +
Sbjct: 77  M-------GITFDR-----------------FTAAILAFVLNYAAYFGEIFRSGIISIDK 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LGLT +     ++LPQA++ +IPP+ ++   L+K++SL   +G  +L+ +  
Sbjct: 113 GQYEAAEMLGLTSKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIAK 172

Query: 355 TIINQTGQAIEIIL 368
              N+    I +IL
Sbjct: 173 IASNRDVTLIPLIL 186


>gi|332088978|gb|EGI94090.1| glutamine transport system permease protein glnP domain protein
           [Shigella boydii 5216-82]
          Length = 140

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 78/129 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++P
Sbjct: 11  FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLP 70

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL ++++++  +
Sbjct: 71  PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFIL 130

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 131 RRLERRMKI 139


>gi|271501471|ref|YP_003334497.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345026|gb|ACZ77791.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 238

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 19/200 (9%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLH 245
           +F  SFV+G  LS  L A R+S      +G A   LY+   LIF G P L+ + L Y   
Sbjct: 24  LFFSSFVVGAALSVLLVAMRVS-AIWPLSGFAR--LYM---LIFRGTPLLIQLFLVYY-- 75

Query: 246 FDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                LGQF+ +  S   P     F    +AL+  TA + AEI+R  L++VP GQ+EA +
Sbjct: 76  ----GLGQFSVVRDSLFWPVLRDPFSCAVMALALCTAGYTAEILRGALLSVPAGQIEAGL 131

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++     R ++ P A+R  +P  +++ + L+K+++LA  V   D+  V   II +T 
Sbjct: 132 ACGMSRWLLLRRIIAPVALRHALPAWSTEAILLIKSTALASLVTVWDITGVAQQIIQRTY 191

Query: 362 QAIEIILIWMFIYLSLSIMI 381
           + +E+ +    IYL L+ +I
Sbjct: 192 RTLEVFVCAALIYLLLNFII 211


>gi|323339297|ref|ZP_08079587.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus ruminis ATCC 25644]
 gi|323093281|gb|EFZ35863.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus ruminis ATCC 25644]
          Length = 228

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 76/125 (60%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   + A+ AEI RSG+I++P+GQ EA ++LG+T       ++LPQA+R+ +P + ++
Sbjct: 99  IALGLNSGAYTAEIFRSGIISIPKGQTEAGLSLGMTRHMVMFEIVLPQAVRNALPAMGNE 158

Query: 331 YLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +++L+K SS+   +G  ++ +    VGGT+ +     I    ++  +  +LS +I  F  
Sbjct: 159 FISLIKESSVLFYIGVQEVTAQALGVGGTLYDFVPPLIVAAAVYFVLTFTLSWIIGYFEK 218

Query: 387 RLNAK 391
           +++ K
Sbjct: 219 KMSRK 223



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           R+S NK++  I RVY+ + R  P ++ +  +Y S+  VL IP
Sbjct: 41  RISDNKILETISRVYISIVRGTPSMIQVMLIYYSLSKVLSIP 82


>gi|239818200|ref|YP_002947110.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239804777|gb|ACS21844.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 226

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 106/212 (50%), Gaps = 22/212 (10%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM   A       V G+VL+  A RLS     +   A P L++  F     P +      
Sbjct: 24  TMKIAAVAIALGVVFGVVLA--ALRLS----GRAWLARPALWVIEFYRNTPPLVHFFWAF 77

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L    PVL       G ++ P + +  IALS  + AF AE+ R GL+++ RGQ EAA 
Sbjct: 78  YAL----PVLI------GVSLDP-YAAAVIALSTQSGAFFAEVFRGGLVSIERGQWEAAR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+G+   +A R V+LPQA+  ++PP   +   L+K ++LA  + ++DL+     + + T 
Sbjct: 127 AVGMRSHQALRRVVLPQALARMLPPFIERSFELIKTTALASTLAYSDLLYQAMQLNSITF 186

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +E+  +   I+      +ALF   L A++A
Sbjct: 187 RPLEVYTVVAAIFF-----LALFSLSLVARVA 213


>gi|326560584|gb|EGE10965.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 103P14B1]
 gi|326565590|gb|EGE15753.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 12P80B1]
 gi|326568464|gb|EGE18544.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis BC7]
 gi|326573965|gb|EGE23915.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis O35E]
          Length = 241

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 13/186 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLYI 271
           +A+P  YI  F   G P LV I L Y        LGQF     +F+     S  +    I
Sbjct: 52  RAIPATYI--FFFRGTPLLVQIFLIYY------GLGQFTALKESFLWDPIFSQAYWCAII 103

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +  T+A+I EIVR  ++AVP G++EAA A+G++ ++    V+LP+A   +IP  +++ 
Sbjct: 104 AFTLNTSAYIGEIVRGAVMAVPTGELEAADAIGMSKQQKLHRVILPRAFGIMIPAYSNEV 163

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK S+LA ++   +L      II+ T   +E+      IYL +S +      +   +
Sbjct: 164 IFMLKGSALAASITVVELTHKARDIISITYLHLEMFFAAGVIYLVISWVFLFIFRQFEHR 223

Query: 392 IALKEK 397
           +   ++
Sbjct: 224 VNRHKR 229


>gi|315653694|ref|ZP_07906614.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|315489056|gb|EFU78698.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
          Length = 498

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245
           I +FS ++G++L   L   RLS H   K    +P + YI   LI G P +V I   Y   
Sbjct: 305 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 355

Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F  G+ +      ++  IA+   + A++AE +RSG+ ++P GQ EAA +L
Sbjct: 356 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 405

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+     R V++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q 
Sbjct: 406 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 465

Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389
           +  +++ M IY     +L+ +++    R+N
Sbjct: 466 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 495


>gi|301793689|emb|CBW36075.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae INV104]
          Length = 521

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R + LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIALPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|226361360|ref|YP_002779138.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226239845|dbj|BAH50193.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 330

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 10/198 (5%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLVLIALKYQ-LH 245
           V  F LG+VL++  +RLS   H    + +  +YI  F    LI  L     I   YQ L 
Sbjct: 93  VLGFALGVVLAV--SRLS---HNPVLQVIAWVYIWAFRSIPLIVQLLFWFNITYLYQTLS 147

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P    F     + V   F +  I L+ + AA+ AEI+RSG+I+V  GQ+EAA +LG+
Sbjct: 148 LGIPFGPAFFTFEVNGVISGFTAAVIGLALHQAAYSAEIIRSGIISVDHGQIEAAQSLGI 207

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             R+    ++LPQAMR I+P   ++ ++L K +S+   +  A+L      I  + G+ + 
Sbjct: 208 PRRRQFFKIVLPQAMRGILPNAANEVISLFKGTSIVSTMAIAELFYQVQVIFGRNGRVVP 267

Query: 366 IILIWMFIYLSLSIMIAL 383
           ++++    Y+ L+ ++++
Sbjct: 268 LLMVATIWYIILTTLLSI 285


>gi|125718886|ref|YP_001036019.1| ABC-type arginine/histidine transporter, permease protein, putative
           [Streptococcus sanguinis SK36]
 gi|125498803|gb|ABN45469.1| ABC-type arginine/histidine transporter, permease protein, putative
           [Streptococcus sanguinis SK36]
 gi|325688945|gb|EGD30953.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 230

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 74/122 (60%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P LT+ +LNL+++
Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTSFLNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E       IY  ++++++L    L   + +K
Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228

Query: 396 EK 397
           E+
Sbjct: 229 ER 230


>gi|62317471|ref|YP_223324.1| amino acid ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|83269452|ref|YP_418743.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|254690968|ref|ZP_05154222.1| Cystine transport system permease protein [Brucella abortus bv. 6
           str. 870]
 gi|254695721|ref|ZP_05157549.1| Cystine transport system permease protein [Brucella abortus bv. 3
           str. Tulya]
 gi|254698752|ref|ZP_05160580.1| Cystine transport system permease protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254732196|ref|ZP_05190774.1| Cystine transport system permease protein [Brucella abortus bv. 4
           str. 292]
 gi|256256153|ref|ZP_05461689.1| Cystine transport system permease protein [Brucella abortus bv. 9
           str. C68]
 gi|260544708|ref|ZP_05820529.1| cystine transport system permease [Brucella abortus NCTC 8038]
 gi|260759992|ref|ZP_05872340.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|62197664|gb|AAX75963.1| amino acid ABC transporter, permease protein [Brucella abortus bv.
           1 str. 9-941]
 gi|82939726|emb|CAJ12723.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|260097979|gb|EEW81853.1| cystine transport system permease [Brucella abortus NCTC 8038]
 gi|260670310|gb|EEX57250.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
          Length = 226

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALIGFTLNIGAYSSEIIRTVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|328958153|ref|YP_004375539.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4]
 gi|328674477|gb|AEB30523.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4]
          Length = 485

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 91/177 (51%), Gaps = 29/177 (16%)

Query: 190 FVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  + V G++L LF+   ++        +    + +PL+ ++ F+ F +P  + I L   
Sbjct: 297 FAIALVAGVILGLFSATSNKLLIGISSIYVTIMRGIPLIVLAFFVYFSIPQFLNIQLS-- 354

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 +++  I LS  T A+I+E+VR G+ AV  GQ+EAA +L
Sbjct: 355 ---------------------AYVAGIITLSLNTTAYISELVRGGIQAVAVGQLEAARSL 393

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           GL ++ + R ++LPQA++ +IP   +Q++  LK++S+   +G  +L   G  II +T
Sbjct: 394 GLPYQTSMRKIILPQAIKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIART 450


>gi|307702517|ref|ZP_07639471.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|307623929|gb|EFO02912.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 521

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 491


>gi|259501631|ref|ZP_05744533.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
 gi|259166916|gb|EEW51411.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
          Length = 498

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245
           I +FS ++G++L   L   RLS H   K    +P + YI   LI G P +V I   Y   
Sbjct: 305 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 355

Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F  G+ +      ++  IA+   + A++AE +RSG+ ++P GQ EAA +L
Sbjct: 356 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 405

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+     R V++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q 
Sbjct: 406 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 465

Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389
           +  +++ M IY     +L+ +++    R+N
Sbjct: 466 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 495


>gi|306840653|ref|ZP_07473405.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306289391|gb|EFM60627.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 207

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 70  FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 129

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 130 PLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 189

Query: 386 NRLNAK 391
            RL  +
Sbjct: 190 VRLERR 195


>gi|311111808|ref|YP_003983030.1| glutamine ABC transporter permease [Rothia dentocariosa ATCC 17931]
 gi|310943302|gb|ADP39596.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Rothia dentocariosa ATCC 17931]
          Length = 311

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 74/115 (64%), Gaps = 2/115 (1%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L +F++I  S +   F+++ I L+ Y  + IAE++RSG+  +PRGQ EA +A+GLT  + 
Sbjct: 136 LSRFSWINPSQL--PFLAVVIGLTFYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPGQT 193

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            R +L+PQA  +++P + SQ++ +LK+++L   + + +L++    I +  G  ++
Sbjct: 194 LRTILMPQAFNAMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQ 248


>gi|294853534|ref|ZP_06794206.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|294819189|gb|EFG36189.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 252

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 73/113 (64%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL++ +++L+K++
Sbjct: 128 AYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDT 187

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA A+   +L      I+  T + + + +    IYL+LS +++    RL  +
Sbjct: 188 SLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERR 240


>gi|283457453|ref|YP_003362030.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283133445|dbj|BAI64210.1| ABC-type amino acid transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 267

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 58/75 (77%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L   +AA+I+E++R+GL A+P+GQMEAA +LG++H +A   +++PQA R ++PPLT++
Sbjct: 136 LSLGMVSAAYISEVLRAGLQAIPKGQMEAARSLGMSHTRAMISIIIPQAFRVVLPPLTNE 195

Query: 331 YLNLLKNSSLAVAVG 345
            + L K+SSL   +G
Sbjct: 196 VILLTKDSSLVYLLG 210


>gi|261318648|ref|ZP_05957845.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|265986447|ref|ZP_06099004.1| amino acid ABC transporter permease [Brucella pinnipedialis
           M292/94/1]
 gi|261297871|gb|EEY01368.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|264658644|gb|EEZ28905.1| amino acid ABC transporter permease [Brucella pinnipedialis
           M292/94/1]
          Length = 254

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 117 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 176

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 177 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 236

Query: 386 NRLNAK 391
            RL  +
Sbjct: 237 VRLERR 242


>gi|238759570|ref|ZP_04620732.1| ABC-type amino acid transport system permease component [Yersinia
           aldovae ATCC 35236]
 gi|238702229|gb|EEP94784.1| ABC-type amino acid transport system permease component [Yersinia
           aldovae ATCC 35236]
          Length = 251

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G+IA+  GQ +A ++LG    +    V+LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIIAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLD 213

Query: 383 LFMNRLNAKIALKE 396
           L  N LN + + K 
Sbjct: 214 LLANGLNRRFSPKN 227


>gi|297191654|ref|ZP_06909052.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721588|gb|EDY65496.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 222

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 76/125 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ YTAAF+ E VRSG+  VP GQ EAA A+GL+  +    V+LPQA RS++ PLT+  
Sbjct: 98  GLAAYTAAFVCEAVRSGINTVPVGQAEAARAIGLSFTQVLSHVVLPQAFRSVVGPLTNVL 157

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L KN+++A A+G A+   V   +I    Q + I  I+ F ++ L++   L +  +  +
Sbjct: 158 IALTKNTTVAAAIGVAEAALVMKEMIENEAQLVLISAIFAFGFVVLTLPTGLILGWVGKR 217

Query: 392 IALKE 396
           +A+K 
Sbjct: 218 VAVKR 222


>gi|300214383|gb|ADJ78799.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius CECT 5713]
          Length = 485

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L                       GS + P F++  I L+  
Sbjct: 331 RGLPLLVLALFIYNGIPSLT----------------------GSKI-PAFIAGIITLTLN 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV +GQMEAA +LGL+  K+ R V+LPQ ++ +IP   +Q++  LK
Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKSMRKVILPQGVKIMIPSFINQFIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  I
Sbjct: 428 DTSILSIIGILELTQTGKIIIARN---LEGFRIWGII 461



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G V T  L   G+I ATI G L+G   +  NK    I    + +FR +P LV+  F
Sbjct: 282 AFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLALF 341

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 342 IYNGIPSL 349


>gi|229587810|ref|YP_002869929.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229359676|emb|CAY46524.1| putative ABC transport system, permease [Pseudomonas fluorescens
           SBW25]
          Length = 221

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 20/202 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG  L+L   RLSR    K    +  +Y+S F   G P LV + L Y   +  P +
Sbjct: 32  FGLVLGFGLALM--RLSRF---KLVSWIARVYVSFFR--GTPLLVQLFLIY---YGLPQV 81

Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G + + I      P  M   I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  + 
Sbjct: 82  GIELDPI------PAAM---IGFSLNMAAYACEILRAAIASIERGQWEAAASIGMTRAQT 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R  +LPQAMR+ +PPL + +++L+K+++LA  +   +L      +  +T +   + L  
Sbjct: 133 LRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSA 192

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             IY  L+ ++A   NRL  ++
Sbjct: 193 ALIYWILASILAHLQNRLEDRV 214



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 13/97 (13%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF++     P+    +Y T IL         +  GM    ++G  +   RLS  KLV+
Sbjct: 2   EAGFQLALDSAPFLLKGAYYTVIL---------SLGGMFFGLVLGFGLALMRLSRFKLVS 52

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSV----LSVLPIP 159
           WI RVYV  FR  P LV +F +Y  +    + + PIP
Sbjct: 53  WIARVYVSFFRGTPLLVQLFLIYYGLPQVGIELDPIP 89


>gi|227890645|ref|ZP_04008450.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
 gi|227867583|gb|EEJ75004.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
          Length = 485

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L                       GS + P F++  I L+  
Sbjct: 331 RGLPLLVLALFIYNGIPSLT----------------------GSKI-PAFIAGIITLTLN 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV +GQMEAA +LGL+  K+ R V+LPQ ++ +IP   +Q++  LK
Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKSMRKVILPQGVKIMIPSFINQFIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  I
Sbjct: 428 DTSILSIIGILELTQTGKIIIARN---LEGFRIWGII 461



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G V T  L   G+I ATI G L+G   +  NK    I    + +FR +P LV+  F
Sbjct: 282 AFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLALF 341

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 342 IYNGIPSL 349


>gi|150398331|ref|YP_001328798.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150029846|gb|ABR61963.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 226

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 14/203 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF LG+ L L  T + R F       +   Y+  ++I G P LV +   + + +  P 
Sbjct: 28  LLSFTLGLALGL-VTAVVRLFAPAPFAVVARFYV--WVIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ + +VPRGQ EAA ++GL+  +A
Sbjct: 82  MG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPRGQWEAAYSIGLSWSQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R  +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  + + + + +  
Sbjct: 134 MRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVATSYEPLILYIEA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IYL +S +++    +L  + A
Sbjct: 194 ALIYLVMSSVLSALQGKLEQRFA 216


>gi|70733753|ref|YP_257393.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348052|gb|AAY95658.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 221

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 74/128 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  +  R  +LPQAMR+ +PPL + 
Sbjct: 93  IGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ ++A   NRL  
Sbjct: 153 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILASVLAHLQNRLEE 212

Query: 391 KIALKEKK 398
           ++   +++
Sbjct: 213 RVNRHDQE 220



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 4/46 (8%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV----LSVLPIP 159
           RLS   LV+WI R+YV  FR  P LV +F +Y  +    L + P+P
Sbjct: 44  RLSHLALVSWIARIYVSFFRGTPLLVQLFVIYYGLPQLGLELDPLP 89


>gi|295095485|emb|CBK84575.1| L-cystine ABC transporter membrane protein/Diaminopimelate ABC
           transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 222

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLVLGFVLALM--RMSNIWPVRW---LARFYISVFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERD 220



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ VFR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSNIWPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107


>gi|291569088|dbj|BAI91360.1| putative ABC transporter permease protein [Arthrospira platensis
           NIES-39]
          Length = 405

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 8/113 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +++A++AE VR GL A+PRGQ EAA ALG+       L++LPQA++  IP +  Q
Sbjct: 276 VGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGINAPLTMALIILPQALKISIPSIVGQ 335

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYL 375
           +++L ++++L   VG  +L+ +  +I+      G+  E+     IL W+F YL
Sbjct: 336 FISLFQDTTLLAIVGLVELLGISRSILANPRFLGRYAEVYLFVGILYWLFCYL 388


>gi|229514448|ref|ZP_04403909.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229348428|gb|EEO13386.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
          Length = 298

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 76/136 (55%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+
Sbjct: 156 LLGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVI 215

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQ + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL
Sbjct: 216 APQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYL 275

Query: 376 SLSIMIALFMNRLNAK 391
            L + +++   ++  +
Sbjct: 276 VLCLSLSMLFKQVERR 291


>gi|218132831|ref|ZP_03461635.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991704|gb|EEC57708.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC
           43243]
          Length = 493

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           + S  F ++ I  S   AA+ AEI R+G+ AVP GQ EAA  LG T  +    ++ PQ +
Sbjct: 359 SYSYRFYAVIIGFSLNYAAYFAEIYRAGIEAVPAGQREAASVLGYTGVQTFTRIVFPQMV 418

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + ++PP+T++ + L+K++SLA A+ + ++ ++   +       + + +  +F Y+  + +
Sbjct: 419 KRVLPPVTNEVITLVKDTSLAFALAYTEMFTLAKQVAAAQASIMPLFVAGLFYYI-FNFV 477

Query: 381 IALFMNRLNAKIA 393
           +A FM +L  K+ 
Sbjct: 478 VAWFMEKLELKLG 490


>gi|37678191|ref|NP_932800.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37196930|dbj|BAC92771.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 236

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           TM+      VFS VL ++L+       R F       L  LYIS F   G P LV L  L
Sbjct: 35  TMEMAILGLVFSLVLAVILANI-----RVFRVPILDPLSQLYISFFR--GTPLLVQLFLL 87

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    P++   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 88  YYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 138

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 139 LSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 189


>gi|301301313|ref|ZP_07207463.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851087|gb|EFK78821.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 485

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L                       GS + P F++  I L+  
Sbjct: 331 RGLPLLVLALFIYNGIPSLT----------------------GSKI-PAFIAGIITLTLN 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV +GQMEAA +LGL+  K+ R V+LPQ ++ +IP   +Q++  LK
Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKSMRKVILPQGVKIMIPSFINQFIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  I
Sbjct: 428 DTSILSIIGILELTQTGKIIIARN---LEGFRIWGII 461



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G V T  L   G+I ATI G L+G   +  NK    I    + +FR +P LV+  F
Sbjct: 282 AFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLALF 341

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 342 IYNGIPSL 349


>gi|296332695|ref|ZP_06875155.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673039|ref|YP_003864711.1| putative ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149975|gb|EFG90864.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411283|gb|ADM36402.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 226

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 94/172 (54%), Gaps = 13/172 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G+P LV++   + L+F  P +G    I  S V+       I  S  +AA+I
Sbjct: 65  LYIS--FMRGVPILVIL---FILYFGFPYIG----IEFSAVTAAL----IGFSLNSAAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RS + +V +GQ EAA +LGL++ +  R ++LPQ++R  +PPL +  L+L+K SSLA
Sbjct: 112 AEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIRIALPPLANVLLDLIKASSLA 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+     I  +    + + ++   IY ++    A F N L  K A
Sbjct: 172 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSAAAAFQNILEKKYA 223



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++F  M   T+IG  +   R+S   L+ W  ++Y+   R +P LV++F L
Sbjct: 23  VIKGIGYTLLISFVSMFAGTVIGLFISLARMSQLALLRWPAKLYISFMRGVPILVILFIL 82

Query: 149 Y 149
           Y
Sbjct: 83  Y 83


>gi|154684862|ref|YP_001420023.1| YxeN [Bacillus amyloliquefaciens FZB42]
 gi|154350713|gb|ABS72792.1| YxeN [Bacillus amyloliquefaciens FZB42]
          Length = 224

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 15/203 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF+ + G++L+L         H+     L  +YIS F   G+PTLV + L Y   +  P 
Sbjct: 32  VFAVIGGLILALITKNRVPVLHQ-----LSKVYISFFR--GVPTLVQLFLIY---YGLPQ 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L    F G S ++    +  I LS   AA++AEI R+ L +V  GQ+EA +++G+T  +A
Sbjct: 82  L----FPGMSKMT-ALTAAIIGLSLKNAAYLAEIFRAALNSVDEGQLEACLSVGMTKSQA 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++ PQA+R+ +P   + ++ LLK +SLA  +G  ++ + G    +   +  E  L  
Sbjct: 137 YRRIIFPQAVRNALPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAV 196

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             +Y  L+I+ ++  + L   I+
Sbjct: 197 AVMYWILTIIYSVLQDLLERAIS 219


>gi|295426472|ref|ZP_06819122.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
 gi|295063840|gb|EFG54798.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
          Length = 219

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 103/212 (48%), Gaps = 31/212 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           + SFVLG++  L      ++     G      + LPLL I  F  FGLP L         
Sbjct: 32  ILSFVLGLIFGLLRYMKIKYVSAIVGFVIDIIRNLPLLLIIFFTYFGLPEL--------- 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                            V+ +  +  IAL  +  A +AEIVRSG+ ++  GQME A + G
Sbjct: 83  ---------------GIVTNQTAASIIALVIFEGAMLAEIVRSGISSIDPGQMEGARSNG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363
           +T  +A   V++PQA+ ++IP L SQ+++L+K++SLA  +   +L+     I +Q T   
Sbjct: 128 MTFGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYI 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I + +I   +Y  +   +++F + L  +  + 
Sbjct: 188 IPMYVIIAVMYFIVCFCLSMFASYLQKRFKMD 219


>gi|284052501|ref|ZP_06382711.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira platensis str. Paraca]
          Length = 405

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 70/113 (61%), Gaps = 8/113 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +++A++AE VR GL A+PRGQ EAA ALG+       L++LPQA++  IP +  Q
Sbjct: 276 VGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGINAPLTMALIILPQALKISIPSIVGQ 335

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEI-----ILIWMFIYL 375
           +++L ++++L   VG  +L+ +  +I+      G+  E+     IL W+F YL
Sbjct: 336 FISLFQDTTLLAIVGLVELLGISRSILANPRFLGRYAEVYLFVGILYWLFCYL 388


>gi|269796951|ref|YP_003316406.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
 gi|269099136|gb|ACZ23572.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
          Length = 216

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 30/208 (14%)

Query: 192 FSFVLGIVLSLFAT---RLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            S V G +L+ F     R  R F   + +  +  PL  +  F +F LP+L          
Sbjct: 28  LSLVFGTILAAFRVAPLRSLRTFAGAYVEVARNTPLTLVFIFFVFVLPSL---------G 78

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P LG+   I             IAL+ YT+AF+ E VRSG+ +V  GQ EAA A+GL
Sbjct: 79  FILP-LGRVPAI-------------IALTAYTSAFVCEAVRSGINSVAVGQAEAARAIGL 124

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +   LV+LPQA+R+++PPL +  + L KN+S+A      +L S    +       + 
Sbjct: 125 GTVQTLSLVVLPQALRTVVPPLINVLIALTKNTSVAAGFAVVELTSTSRALARDNPADVV 184

Query: 366 IILIWMFI-YLSLSIMIALFMNRLNAKI 392
           ++L  + + YL ++I   +  N +  K+
Sbjct: 185 LLLTGIAVCYLVITIPAGIAANAIERKV 212


>gi|229490772|ref|ZP_04384607.1| glutamate transport system permease protein GluC [Rhodococcus
           erythropolis SK121]
 gi|229322162|gb|EEN87948.1| glutamate transport system permease protein GluC [Rhodococcus
           erythropolis SK121]
          Length = 226

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 12/129 (9%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  I  F +FGL   + + L      D P            V   F    + LS YTAA
Sbjct: 62  PLTLILLFCLFGLSQTLGVNLAKS---DSPTF---------LVDNNFRLAVLGLSVYTAA 109

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+ E +RSG+  VP GQ EA  +LGL+  +  RL++LPQA R++  PL S  + L KNS+
Sbjct: 110 FVCESLRSGINTVPVGQAEAGRSLGLSFAQNLRLIVLPQAFRAVTAPLGSVLIALTKNST 169

Query: 340 LAVAVGFAD 348
           +A  +G ++
Sbjct: 170 IAAVIGVSE 178



 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-P 141
           S Y   +L  F  T  L F   I A IIG L+ A R+S   +  ++   YV VFRN P  
Sbjct: 5   SKYGDQLLEAFWTTIQLTFFSAIGAVIIGVLIAAMRVSPVPVARFLGAAYVTVFRNTPLT 64

Query: 142 LVVIFFLY 149
           L+++F L+
Sbjct: 65  LILLFCLF 72


>gi|223984172|ref|ZP_03634322.1| hypothetical protein HOLDEFILI_01615 [Holdemania filiformis DSM
           12042]
 gi|223963868|gb|EEF68230.1| hypothetical protein HOLDEFILI_01615 [Holdemania filiformis DSM
           12042]
          Length = 210

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 15/202 (7%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           F + ++LSL    L +   + +G+AL PL      L+ G P L+ +     + F  P LG
Sbjct: 20  FFVTLMLSLPLACLLQALQQFSGRALKPLFRGYITLMRGTPLLLQLMF---IFFGMPYLG 76

Query: 253 QFNFIGGSTVSPEFMSLYIALSC-YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                   T+S E MS+YIA +  YTA FI EI+R  L AV  GQ EA   LG + R   
Sbjct: 77  L-------TLSRE-MSIYIAFTLNYTAYFI-EILRGALSAVDPGQAEAGKMLGFSRRYIY 127

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             + LPQA+R+ +P + ++ LNL+K++SL   +G ++L+  G + +N    A+  + + +
Sbjct: 128 FRIQLPQALRTAMPAIGNEVLNLVKDTSLIYVLGASELLKAGRSAVNTYATALPFVFVGI 187

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +YL++    +  + R+  +I+
Sbjct: 188 -LYLAMCGGFSWILGRIEKRIS 208


>gi|254451516|ref|ZP_05064953.1| ABC-type glutamine transport system, permease component
           [Octadecabacter antarcticus 238]
 gi|198265922|gb|EDY90192.1| ABC-type glutamine transport system, permease component
           [Octadecabacter antarcticus 238]
          Length = 206

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 27/179 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++P+L +  ++ +GLPT                      + G T+S  F +  +AL+  
Sbjct: 49  RSVPILVLILWVYYGLPT----------------------VSGITLSV-FWAGVLALALS 85

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF AEI R+G+ ++ RGQ EAA ++ L +R   R ++LPQA+R I+P L +Q + +LK
Sbjct: 86  DSAFQAEIFRAGIQSIGRGQYEAAQSVSLNYRDTMRYIILPQAIRRILPALGNQLVYMLK 145

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRLNAK 391
            SSL   +G  +L      ++    + +EI  I +  YL L ++++     F  RL A 
Sbjct: 146 MSSLVSVIGLQELTRKANELVVSEYRPLEIYTILVLEYLVLILIVSAGVRWFERRLKAS 204


>gi|146312151|ref|YP_001177225.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145319027|gb|ABP61174.1| L-cystine ABC transporter membrane protein / Diaminopimelate ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 222

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG +L+L           +    LP+ +++ F I       LIA  + +++  P  
Sbjct: 32  FGLVLGFILALM----------RMSPVLPVRWLARFYISVFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERD 220



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ VFR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSLGGMFFGLVLGFILALMRMSPVLPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107


>gi|94991751|ref|YP_599850.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS2096]
 gi|94545259|gb|ABF35306.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS2096]
          Length = 387

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 1/133 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++     +++I +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ
Sbjct: 235 GISIDRTLAAIFI-VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQ 293

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            +R+I+P   ++++  +K++S+   +   +L   G T+  QT Q  +   I   IY  L+
Sbjct: 294 VVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLT 353

Query: 379 IMIALFMNRLNAK 391
             +   +  +  +
Sbjct: 354 FTVTRILRHIERR 366


>gi|58336908|ref|YP_193493.1| glutamine ABC transporter membrane protein [Lactobacillus
           acidophilus NCFM]
 gi|227903466|ref|ZP_04021271.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus acidophilus ATCC 4796]
 gi|58254225|gb|AAV42462.1| glutamine ABC transporter (membrane protein) [Lactobacillus
           acidophilus NCFM]
 gi|227868786|gb|EEJ76207.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus acidophilus ATCC 4796]
          Length = 218

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLVRYMKIKYLSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  +  A +AEIVRSG+ +V  GQME A + G+T
Sbjct: 83  ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+ ++IP L SQ+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   ++   N L  K
Sbjct: 190 MYVIIAIMYFIVCFCLSQVANYLQKK 215


>gi|307130767|ref|YP_003882783.1| arginine ABC transporter membrane protein [Dickeya dadantii 3937]
 gi|306528296|gb|ADM98226.1| arginine transporter subunit; membrane component of ABC superfamily
           [Dickeya dadantii 3937]
          Length = 238

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPV-LGQFNFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L ++  + LH      PV L   NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLMLSDGFTLHLGLTQVPVKLAIDNF----EVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AA+ ++ +R  L AVPRGQ E+  ALG++     R +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYAAYASQTLRGALKAVPRGQWESGQALGMSKSVIFRRLIMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++    +NR+  +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLVITLLSQAILNRIEVR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|255318801|ref|ZP_05360027.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter radioresistens SK82]
 gi|262378935|ref|ZP_06072092.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter radioresistens SH164]
 gi|255304057|gb|EET83248.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter radioresistens SK82]
 gi|262300220|gb|EEY88132.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter radioresistens SH164]
          Length = 227

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+    +S  +A   + AA+ +EIVR+G+ ++PRGQ  AA ALG+T+ +  RLV+LPQA 
Sbjct: 94  TIDTALVSSIVAFMLFEAAYFSEIVRAGIQSIPRGQSAAAYALGMTYSQNMRLVVLPQAF 153

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSL 377
           R + P L  Q + L ++S++  A+G  D      V G +++   Q    IL    +Y ++
Sbjct: 154 RKMTPLLLQQTIILFQDSTMVYAIGLLDFFRSNYVRGDLMSLLTQ---YILFAGLVYFTI 210

Query: 378 SIMIALFMNRLNAKI 392
           S +    + RL  ++
Sbjct: 211 SALATYTVRRLQKRL 225



 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 31/44 (70%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           +IGTL+   RLS+ +++  + + YV +FR+IP L+V+ + Y +V
Sbjct: 38  LIGTLLALMRLSSFRILNLVAQAYVNLFRSIPLLLVLMWFYFAV 81


>gi|322386192|ref|ZP_08059825.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269772|gb|EFX52699.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 230

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 74/122 (60%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P LT+ +LNL+++
Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTAFLNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E       IY  ++++++L    L   + +K
Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228

Query: 396 EK 397
           E+
Sbjct: 229 ER 230


>gi|255262639|ref|ZP_05341981.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Thalassiobium sp. R2A62]
 gi|255104974|gb|EET47648.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Thalassiobium sp. R2A62]
          Length = 432

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ ++AA+IAE+VR GL A+P+GQ EAA +LGL + +A RL++LPQA++  IP
Sbjct: 297 FLRVVIMITIFSAAYIAEVVRGGLAALPKGQYEAADSLGLDYTQAMRLIILPQALKISIP 356

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + +  + L K+++L   +   D+V  + G I+  T
Sbjct: 357 GIVNVSVGLFKDTTLVSVISMFDMVGMIRGPILAST 392


>gi|256830136|ref|YP_003158864.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256579312|gb|ACU90448.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 226

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 76/129 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I ++  + A+IAEIVR  + ++  GQ EA  ++GLT  +  R ++ PQA + +
Sbjct: 89  PPLIAGVIVIAINSGAYIAEIVRGAIQSINVGQTEAGRSIGLTRAQTMRYIIWPQAFKRM 148

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL +Q++  LK++SL + +G  +L+  G  I+    +A E+ +    +YL +++ IA 
Sbjct: 149 IPPLGNQFIISLKDTSLLMVIGVGELLRTGQEIVAVNFRAFEVYMAVAMVYLVMTMSIAK 208

Query: 384 FMNRLNAKI 392
            +  L  ++
Sbjct: 209 ALKILETRL 217


>gi|194016112|ref|ZP_03054727.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Bacillus pumilus ATCC 7061]
 gi|194012467|gb|EDW22034.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Bacillus pumilus ATCC 7061]
          Length = 225

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 15/173 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LYIS   + G+P LV++   + L+F  P +G +F  +  + +   F S         AA+
Sbjct: 64  LYIS--FMRGVPILVIL---FILYFGFPYIGIEFTAVTAAIIGFSFNS---------AAY 109

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEI R+ L +VP GQ+EAA +LGL++ +  R V+LPQ++R  +PPLT+  L+L+K SSL
Sbjct: 110 IAEINRAALSSVPSGQVEAAKSLGLSYWQTMRGVILPQSVRIALPPLTNVMLDLIKASSL 169

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +L      +  +    + + ++   IY  +  +++L  + L    A
Sbjct: 170 AAMITVPELFQQAKIVGGREFDYMTMYILVALIYWGICSVVSLLQDFLEKHYA 222


>gi|75675719|ref|YP_318140.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           winogradskyi Nb-255]
 gi|74420589|gb|ABA04788.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 506

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 62/97 (63%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      + + I ++ +  A+ AE++R GL AVP GQ EAA ALGL++ K T L++
Sbjct: 359 FLPGNFTVDGLVRVLIGIALFAGAYNAEVIRGGLAAVPGGQAEAAHALGLSYWKTTGLIV 418

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           +PQA+R +IP L + ++ L K++SL   V   DL+ +
Sbjct: 419 MPQAVRHVIPGLVNSFIALFKDTSLVSIVALFDLLGI 455


>gi|319761415|ref|YP_004125352.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317115976|gb|ADU98464.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 223

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 14/211 (6%)

Query: 188 KIFVFSFVLGIVLSL----FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           K F+FS VL ++ +L    F T L+      +GK   L+  +T  + G+ ++ L+ +   
Sbjct: 21  KGFIFSLVLTVIATLGGVLFGTLLA--LMRLSGKKW-LMAPATIYVNGMRSIPLVMVILW 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P+      I G  +  E  S  I    + AA+ +EI+R+G+ +VPRGQ+ A  AL
Sbjct: 78  FFLLVPL------IIGRPIGAE-ASAIITFVAFEAAYFSEIMRAGIQSVPRGQVFAGQAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  +LV+LPQA R+++P L +Q + L +++SL  A+G  D++          G+ 
Sbjct: 131 GMTYSQNMKLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFDVAGKNFGRP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +E  L     Y  +   ++  + RL+ KIA+
Sbjct: 191 VEAYLAAAVAYFVICYSLSWAVKRLHKKIAI 221


>gi|238757266|ref|ZP_04618453.1| Glutamine transport system permease protein glnP [Yersinia aldovae
           ATCC 35236]
 gi|238704644|gb|EEP97174.1| Glutamine transport system permease protein glnP [Yersinia aldovae
           ATCC 35236]
          Length = 218

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 72/118 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PPL +Q++  +K
Sbjct: 100 SGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPPLGNQWIVSIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + RL  K+ +
Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217


>gi|291301452|ref|YP_003512730.1| polar amino acid ABC transporter inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
 gi|290570672|gb|ADD43637.1| polar amino acid ABC transporter, inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
          Length = 220

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 7/124 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  YT A + E +RSG+ ++  GQ EAA ++GLT  ++   V+LPQA R+++PPL S 
Sbjct: 92  IGLGTYTGALVGETLRSGINSISLGQAEAARSIGLTFGQSLSSVILPQAFRTVVPPLGSL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-------ILIWMFIYLSLSIMIAL 383
           ++ L+KNS+LA AVG  +L  V   +      ++ I       IL ++ I L  S +I +
Sbjct: 152 FIALVKNSALASAVGIIELSGVADQLQEDRNVSVSIWTIVIGVILFYLIINLPASYLIRV 211

Query: 384 FMNR 387
              R
Sbjct: 212 AEKR 215


>gi|224367655|ref|YP_002601818.1| AapM [Desulfobacterium autotrophicum HRM2]
 gi|223690371|gb|ACN13654.1| AapM [Desulfobacterium autotrophicum HRM2]
          Length = 364

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       KA  ++YI   LI G+P   LI+L +      P+L       G T++ + 
Sbjct: 182 LGRQSRMPVIKAFSVVYIE--LIRGVP---LISLLFMSSVVFPLL----LPEGVTLN-KI 231

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +   +A+  +TAA+IAE+VR GL  + RGQ EAA +LGL + +  RL++LPQA++ +IPP
Sbjct: 232 LRAQVAIIMFTAAYIAEVVRGGLQGMNRGQYEAAESLGLNYFQTMRLIILPQALKIVIPP 291

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIAL 383
             S  ++  K++SL V +   DL+    T ++     G + E  +    IY      ++ 
Sbjct: 292 SVSILISAFKDTSLVVIIALYDLLKTTQTTLSHPQWMGFSAEAYIFVALIYFVCCFFMSN 351

Query: 384 FMNRLNAKI 392
           +  RL  ++
Sbjct: 352 YSRRLEREL 360


>gi|315612520|ref|ZP_07887433.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|322374942|ref|ZP_08049456.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C300]
 gi|315315501|gb|EFU63540.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|321280442|gb|EFX57481.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C300]
          Length = 521

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 491


>gi|301645563|ref|ZP_07245493.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307138585|ref|ZP_07497941.1| putative transporter subunit [Escherichia coli H736]
 gi|331642540|ref|ZP_08343675.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H736]
 gi|301076172|gb|EFK90978.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|331039338|gb|EGI11558.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H736]
          Length = 222

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T     + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLDVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|284043462|ref|YP_003393802.1| polar amino acid ABC transporter inner membrane subunit
           [Conexibacter woesei DSM 14684]
 gi|283947683|gb|ADB50427.1| polar amino acid ABC transporter, inner membrane subunit
           [Conexibacter woesei DSM 14684]
          Length = 335

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 78/133 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L     A++AEIVR+G+++V  GQ  A+ ALG+T  +  R ++LPQAMR IIP
Sbjct: 164 FVVALLGLGLNEGAYMAEIVRAGVLSVDEGQTHASQALGMTRLQTMRRIVLPQAMRVIIP 223

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  ++ +++LK +SL   + +A+L+     I ++  + I+++++    YL ++ ++ +  
Sbjct: 224 PTGNETISMLKTTSLVSVIAYAELLYASQLIYSENYRTIQLLIVASIWYLVMTTVLTIGQ 283

Query: 386 NRLNAKIALKEKK 398
             L  +     ++
Sbjct: 284 AWLERRFGRGTRR 296



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 34/66 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D  +   ++ G V T  +  + M+   +IG L+   RLS N LVA +   YV +FR  P 
Sbjct: 65  DYLFDPRVMDGVVLTIEITIAAMVAGVLIGVLLAVMRLSPNPLVAAVAGFYVWIFRGTPV 124

Query: 142 LVVIFF 147
           LV + F
Sbjct: 125 LVQLLF 130


>gi|262184190|ref|ZP_06043611.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 317

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 4/130 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA++AEIVRSG+ +VP GQ EA+ ALG+      R  +LPQAMR IIPP  ++
Sbjct: 160 LGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVLPQAMRIIIPPTGNE 219

Query: 331 YLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMN 386
           +++LLK SSL VA+ + A++      I     + I ++++   W     SL ++   F+ 
Sbjct: 220 FISLLKTSSLVVAIPYTAEIFGRATDISAALFEPIPLLMVAATWYLAITSLLMVGQYFLE 279

Query: 387 RLNAKIALKE 396
           R   + A +E
Sbjct: 280 RRFERGATRE 289


>gi|225686457|ref|YP_002734429.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
 gi|256043565|ref|ZP_05446492.1| cystine transport system permease protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|256111397|ref|ZP_05452423.1| cystine transport system permease protein [Brucella melitensis bv.
           3 str. Ether]
 gi|265999077|ref|ZP_05464935.2| cystine transport system permease [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642562|gb|ACO02475.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
 gi|263092136|gb|EEZ16433.1| cystine transport system permease [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410835|gb|ADZ67899.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M28]
 gi|326554126|gb|ADZ88765.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M5-90]
          Length = 226

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|218658149|ref|ZP_03514079.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli IE4771]
          Length = 177

 Score = 76.3 bits (186), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 70/115 (60%), Gaps = 9/115 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S +  A++AE++R GL A+PRGQ EA  +LGL + +A RLV++PQA++  IP + + 
Sbjct: 53  IMVSLFATAYMAEVIRGGLAALPRGQYEAGESLGLDYWQAQRLVIMPQALKISIPSIVNT 112

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS-LSIMIALF 384
           ++ L K++++ V +G  D +++  +I   T         W  IY   LS+ + LF
Sbjct: 113 FIGLFKDTTIVVFIGLLDPIALTNSIRATTD--------WQGIYWELLSLPVPLF 159


>gi|324992354|gb|EGC24275.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324996123|gb|EGC28034.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|327460583|gb|EGF06918.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327488940|gb|EGF20737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 521

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 65/106 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L   G TI  QT Q  +   I   IY  L+
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTIIAAIYFVLT 488



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 11/88 (12%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+FR  P +V  
Sbjct: 299 TLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEIFRGTPMIVQS 358

Query: 146 FFLYKSVLSVLPIP-DHSIVLPFGMFLN 172
             +Y        I  D +I   F + +N
Sbjct: 359 MVIYYGTAQAFGISIDRTIAAIFIVSIN 386


>gi|227510040|ref|ZP_03940089.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227512970|ref|ZP_03943019.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227083727|gb|EEI19039.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227190419|gb|EEI70486.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 716

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 32/198 (16%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLH 245
           F+ + GIV+ L      + F+  +       + +PLL ++ F+  G+P+L          
Sbjct: 531 FATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALFIYTGIPSLT--------- 581

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                        G  + P F++  + L+    A+IA  V+ G+ AV  GQMEAA +LGL
Sbjct: 582 -------------GEKI-PAFVAGVVTLTFNEGAYIAAFVKGGIQAVDPGQMEAARSLGL 627

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              K+ R V+LPQ +R +IP   +Q++  LK++S+   +G  +L   G  II +    +E
Sbjct: 628 PFGKSMRKVILPQGIRIMIPSFINQFIITLKDTSILSIIGLLELTQTGKIIIARN---LE 684

Query: 366 IILIWMFIYLSLSIMIAL 383
              +W  + L   I+I L
Sbjct: 685 GFKVWTIVALMYLIIITL 702



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T WL    +  ATI G +VG   +   K   W+  + + +FR +P LV+  F
Sbjct: 513 ALLSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALF 572

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 573 IYTGIPSL 580


>gi|186472110|ref|YP_001859452.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184194442|gb|ACC72406.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 248

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 74/125 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A++    A+  EIVR+G+ ++PRGQ++AA ALGL  R+  R V+LPQA+ ++ 
Sbjct: 89  EIQAAILAMTVNLGAYAIEIVRAGIDSIPRGQVQAAQALGLQGRQVFRHVVLPQAIANVF 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L SQ L ++  S++   +   DL      I ++  ++ E  +I    YL+LSI++   
Sbjct: 149 PALLSQVLIVMLGSAVVSQISVPDLTYAANYIQSRNFRSFEAYVIITATYLALSIVLRQL 208

Query: 385 MNRLN 389
           +NRL 
Sbjct: 209 LNRLG 213


>gi|90961557|ref|YP_535473.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
 gi|90820751|gb|ABD99390.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
          Length = 485

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L                       GS + P F++  I L+  
Sbjct: 331 RGLPLLVLALFIYNGIPSLT----------------------GSKI-PAFIAGIITLTLN 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV +GQMEAA +LGL+  K+ R V+LPQ ++ +IP   +Q++  LK
Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKSMRKVILPQGVKIMIPSFINQFIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  I
Sbjct: 428 DTSILSIIGILELTQTGKIIIARN---LEGFRIWGII 461



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G V T  L   G+I ATI G L+G   +  NK    I    + +FR +P LV+  F
Sbjct: 282 AFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLALF 341

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 342 IYNGIPSL 349


>gi|302191162|ref|ZP_07267416.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus iners AB-1]
 gi|309803182|ref|ZP_07697279.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           11V1-d]
 gi|308164690|gb|EFO66940.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           11V1-d]
          Length = 492

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245
           I +FS ++G++L   L   RLS H   K    +P + YI   LI G P +V I   Y   
Sbjct: 299 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 349

Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F  G+ +      ++  IA+   + A++AE +RSG+ ++P GQ EAA +L
Sbjct: 350 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 399

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+     R V++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q 
Sbjct: 400 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 459

Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389
           +  +++ M IY     +L+ +++    R+N
Sbjct: 460 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 489


>gi|238761693|ref|ZP_04622668.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
 gi|238700207|gb|EEP92949.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
          Length = 220

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 18/176 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F +G+V+ L  +      H + G+    +YIS F   G P L  + L + L  +   
Sbjct: 32  VAGFFIGVVIYLMESG-----HSRFGRGFARVYISLFR--GTPVLAQVLLCFYLPGE--- 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +G S   P +++  +AL+  TAA+ ++I+RSG  A+P GQ+EAA   GL+ R+ 
Sbjct: 82  ------LGLSL--PGYLAAVMALTLNTAAYQSQILRSGFAAIPPGQLEAAAMCGLSSRQT 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              + +PQ +R  +P L S+ ++++K S++   +   DL+ VG  + + T + +E+
Sbjct: 134 LWYIQIPQVLRLTMPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 189


>gi|229551216|ref|ZP_04439941.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315379|gb|EEN81352.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 566

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 70/110 (63%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++
Sbjct: 421 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 480

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             +K++S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+
Sbjct: 481 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTIS 530


>gi|168180087|ref|ZP_02614751.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|182668974|gb|EDT80950.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
          Length = 219

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   AA+++EI+R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + 
Sbjct: 94  IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRFQNLHYIILPQAVKISVPPLVNG 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
           + +LLK++SL   +   +L   G  I ++T +  E+ L     Y  L+ ++++   F+ +
Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEK 213

Query: 388 LNAK 391
            N K
Sbjct: 214 RNEK 217


>gi|306832761|ref|ZP_07465897.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304425110|gb|EFM28240.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 523

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTV 494


>gi|254699907|ref|ZP_05161735.1| amino acid ABC transporter, permease protein [Brucella suis bv. 5
           str. 513]
 gi|254705829|ref|ZP_05167657.1| amino acid ABC transporter, permease protein [Brucella
           pinnipedialis M163/99/10]
 gi|254711057|ref|ZP_05172868.1| amino acid ABC transporter, permease protein [Brucella
           pinnipedialis B2/94]
 gi|256015453|ref|YP_003105462.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|256029438|ref|ZP_05443052.1| amino acid ABC transporter, permease protein [Brucella
           pinnipedialis M292/94/1]
 gi|256059129|ref|ZP_05449338.1| amino acid ABC transporter, permease protein [Brucella neotomae
           5K33]
 gi|260167469|ref|ZP_05754280.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261313256|ref|ZP_05952453.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261750383|ref|ZP_05994092.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|255998113|gb|ACU49800.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261302282|gb|EEY05779.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261740136|gb|EEY28062.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 226

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|163733774|ref|ZP_02141216.1| amino acid ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
 gi|161392885|gb|EDQ17212.1| amino acid ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
          Length = 432

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 16/210 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +L  L IP+++        + +R L    L M         S  LGIVL+L      R  
Sbjct: 198 ILGGLLIPENANETAMMTAVPSRDLGGFMLNMMLGVTCVSLSVPLGIVLAL-----GRQS 252

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                K + +++I    I G+P + L+       F   V+  + F   STV   F+ + I
Sbjct: 253 SMPLIKWICVIFIE--FIRGVPLITLL-------FVASVMLAYFFPPESTVD-LFLRVVI 302

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            ++ +++A+IAE++R GL A+P+GQ E A +LGL + +ATRL++LPQA++  IP + +  
Sbjct: 303 MITMFSSAYIAEVIRGGLAALPKGQYEGADSLGLDYTQATRLIILPQALKISIPGIVNVA 362

Query: 332 LNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
           + L K+++L   +   DLV  + G I+  T
Sbjct: 363 VGLFKDTTLVSVISMFDLVGMIRGPILAST 392


>gi|27364436|ref|NP_759964.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|27360555|gb|AAO09491.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus
           CMCP6]
          Length = 223

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           TM+      VFS VL ++L+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TMEMAILGLVFSLVLAVILANI-----RVFRLPILDPLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    P++   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|309804770|ref|ZP_07698834.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           09V1-c]
 gi|309806268|ref|ZP_07700281.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|312871595|ref|ZP_07731687.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|312871955|ref|ZP_07732037.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|312873247|ref|ZP_07733303.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|312874656|ref|ZP_07734680.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|325911684|ref|ZP_08174091.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325913019|ref|ZP_08175392.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|329921097|ref|ZP_08277620.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
 gi|308165880|gb|EFO68099.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           09V1-c]
 gi|308167252|gb|EFO69418.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|311089886|gb|EFQ48306.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311091258|gb|EFQ49646.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|311092532|gb|EFQ50894.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092820|gb|EFQ51172.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|325476450|gb|EGC79609.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325477699|gb|EGC80838.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|328935004|gb|EGG31493.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
          Length = 492

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245
           I +FS ++G++L   L   RLS H   K    +P + YI   LI G P +V I   Y   
Sbjct: 299 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 349

Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F  G+ +      ++  IA+   + A++AE +RSG+ ++P GQ EAA +L
Sbjct: 350 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 399

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+     R V++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q 
Sbjct: 400 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 459

Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389
           +  +++ M IY     +L+ +++    R+N
Sbjct: 460 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 489


>gi|70732346|ref|YP_262102.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68346645|gb|AAY94251.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 229

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 10/172 (5%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSP----EFMSLYIALSCYT 277
           YIS F   G P LV I   Y L++    +   +  I GS + P     F  + +AL+   
Sbjct: 56  YISVFR--GTPLLVQI---YILYYGVGSLFAAYPPIRGSFLWPYLREGFWYVALALTLSV 110

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E++R GL AVPRG++EAA A G+ H    R V LP+A+  + P L  + + LLK 
Sbjct: 111 GAYVGEVLRGGLRAVPRGELEAARAYGMGHWLTLRRVWLPRALELVRPTLVGECVLLLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++LA  V   DL+     +  QT +  E +L    IY+ L+ +I     RL 
Sbjct: 171 TALASTVAVTDLLGAANLVRAQTLKVYEPLLAVALIYIVLAFVIEHLCARLG 222


>gi|227524183|ref|ZP_03954232.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088653|gb|EEI23965.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
          Length = 242

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 31/216 (14%)

Query: 168 GMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KAL 219
           G+   N+G  LS    TM        F+ + GIV+ L      + F+  +       + +
Sbjct: 31  GLIKQNQGALLSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGM 90

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL ++ F+  G+P+L                       G  + P F++  + L+    A
Sbjct: 91  PLLVLALFIYTGIPSLT----------------------GEKI-PAFVAGVVTLTFNEGA 127

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IA  V+ G+ AV  GQMEAA +LGL   K+ R V+LPQ +R +IP   +Q++  LK++S
Sbjct: 128 YIAAFVKGGIQAVDPGQMEAARSLGLPFGKSMRKVILPQGIRIMIPSFINQFIITLKDTS 187

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +   +G  +L   G  II +  +  ++  I   +YL
Sbjct: 188 ILSIIGLLELTQTGKIIIARNLEGFKVWTIVALMYL 223



 Score = 40.0 bits (92), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T WL    +  ATI G +VG   +   K   W+  + + +FR +P LV+  F
Sbjct: 39  ALLSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALF 98

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 99  IYTGIPSL 106


>gi|209547536|ref|YP_002279454.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538780|gb|ACI58714.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 220

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 24/178 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +  F  F LP       +  L  DK                   S  + LS Y
Sbjct: 65  RNLPILVLVLFAFFALP-------QMGLRLDK-----------------IKSFVLVLSLY 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AE+ R+GL+++P+G  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K
Sbjct: 101 SGAYLAEVFRAGLLSIPKGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SLA A+   +L      I  ++ + IE  ++   +Y++   +IA  M  +  ++AL
Sbjct: 161 DTSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAAVMRFVERRLAL 218


>gi|153216007|ref|ZP_01950229.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124114520|gb|EAY33340.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
          Length = 298

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLSLSMLFKQVEKR 291


>gi|312863976|ref|ZP_07724212.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|311100389|gb|EFQ58596.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
          Length = 515

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 444

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+ +QT Q  +   +   IY  L+  +
Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTV 493



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLS---ANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++  G +  T IG ++G  R +   ANK VA       W+  VY+EVFR  P +V  
Sbjct: 301 TLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEVFRGTPMIVQS 360

Query: 146 FFLY 149
             +Y
Sbjct: 361 MVIY 364


>gi|265985359|ref|ZP_06098094.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306845793|ref|ZP_07478361.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|264663951|gb|EEZ34212.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306273685|gb|EFM55523.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
          Length = 219

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 82  FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 141

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 142 PLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 201

Query: 386 NRLNAK 391
            RL  +
Sbjct: 202 VRLERR 207


>gi|262191876|ref|ZP_06050045.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|262032241|gb|EEY50810.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
          Length = 298

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLSLSMLFKQVEKR 291


>gi|229588543|ref|YP_002870662.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229360409|emb|CAY47266.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 365

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A++AE+VR GL A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|288958133|ref|YP_003448474.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288910441|dbj|BAI71930.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 368

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 15/159 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F L I+L+L      R  +    K L + YI   LI G+P   LI+L +      P+  
Sbjct: 175 AFPLSILLAL-----GRRSNMPAVKVLCVTYIE--LIRGVP---LISLLFMASVMLPL-- 222

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F+       + +   IA   + AA++AE +R GL A+P+GQ EAA  LGL++ +  R
Sbjct: 223 ---FLPNGVSIDKLLRAQIAFILFAAAYMAEAIRGGLQAIPKGQYEAADGLGLSYWQKMR 279

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            ++LPQA+   IPPL + +++  K++SL + +G  DL+ 
Sbjct: 280 KIVLPQALAVAIPPLVNTFISFFKDTSLVIIIGLYDLLG 318


>gi|242237676|ref|YP_002985857.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242129733|gb|ACS84035.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 223

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 113/207 (54%), Gaps = 15/207 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F+ VLG++L+L   R SR         L  LYIS F   G+P+LV +   + ++F  P L
Sbjct: 32  FAIVLGLILAL--IRESRLL---VVAKLVELYISLFR--GIPSLVQL---FIIYFGLPQL 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F  + G +      +  I  S   +A++AEI R+ L +V  GQ EA +++G++  +  
Sbjct: 82  --FPALNGLSA---MAAAIIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVGMSRVQIY 136

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQAM + +P   + +++L+K++S+A A+G ++L + G  I  ++ +  E  L+  
Sbjct: 137 RRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFFETFLVVG 196

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  + I  + F  RL  K++   ++
Sbjct: 197 LIYWLVIIAYSWFQTRLEKKLSHSRQR 223


>gi|163740276|ref|ZP_02147670.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Phaeobacter gallaeciensis 2.10]
 gi|161386134|gb|EDQ10509.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Phaeobacter gallaeciensis 2.10]
          Length = 432

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 80/132 (60%), Gaps = 4/132 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++  IP
Sbjct: 297 FLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIP 356

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381
            + +  + L K+++L   +   DLV  + G I+  T   G   E++    F++  +   I
Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFIVCYGI 416

Query: 382 ALFMNRLNAKIA 393
           + +   L  ++A
Sbjct: 417 SQYSQWLERRLA 428



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 68  AGFEIDQGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
            GF I +G     SD++  +A+    L GF+    L  + +  +  +G  +  GR S   
Sbjct: 200 GGFLIPEG----ASDNAMLSAVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSNMP 255

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           L+ WIC V++E  R + PL+ + F+   +LS    PD ++ L
Sbjct: 256 LIKWICVVFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 296


>gi|153010841|ref|YP_001372055.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562729|gb|ABS16226.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 239

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 112/201 (55%), Gaps = 9/201 (4%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A   VF  +L ++ +L   RLS     K    +  LY+  F+  G P LV I +
Sbjct: 19  LTLKLAATSIVFGAILALLFALM--RLS---GIKVLDWIARLYV--FVFRGTPLLVQIFI 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y      P + +++F+      P + ++ IAL+   AA+ +EI+R GL++VP GQ+EAA
Sbjct: 72  IYYGLSQFPAI-RYSFLWPVLREPYWCAI-IALTLNNAAYASEIIRGGLLSVPHGQIEAA 129

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A G++     R +++P A+R  +P   ++ ++++K +SLA  +   ++  +   +I ++
Sbjct: 130 KACGMSSFTCFRRIVMPLAVRQALPGYGNEMISMIKATSLASIITLMEVTGIAAKLIAES 189

Query: 361 GQAIEIILIWMFIYLSLSIMI 381
            +AIEI +I   IYL+++ ++
Sbjct: 190 YRAIEIFVIAGAIYLAINFVL 210



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA + ++   I+  L    RLS  K++ WI R+YV VFR  P LV IF +Y   LS 
Sbjct: 20  TLKLAATSIVFGAILALLFALMRLSGIKVLDWIARLYVFVFRGTPLLVQIFIIYYG-LSQ 78

Query: 156 LPIPDHSIVLP 166
            P   +S + P
Sbjct: 79  FPAIRYSFLWP 89


>gi|326692920|ref|ZP_08229925.1| ABC-type amino acid transport system, permease component
           [Leuconostoc argentinum KCTC 3773]
          Length = 219

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 25/178 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL I  F+ F LP       K  +H                    F +  IA+S +
Sbjct: 66  RNLPLLLIIFFVYFALP-------KIGIHLSV-----------------FWATIIAMSTF 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A +AEIVR GL +V  GQ E A A GL++ +    ++LPQA + +IPP+ SQ ++L+K
Sbjct: 102 ESAMLAEIVRGGLESVDIGQFEGARANGLSNMQTMIYIILPQAYKKMIPPIISQLISLVK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++SLA+ +  A+L+  G  +  Q     I ++++   +Y  L+  ++L     + K+A
Sbjct: 162 DTSLAMGIVLAELMYRGQIVYAQNSTYIIPVLIVITLVYFVLNYGLSLVARWADRKLA 219


>gi|307727658|ref|YP_003910871.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588183|gb|ADN61580.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 251

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 83/147 (56%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +GQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  MGQFGVIRESFLWPVLREPYLCAVLSLALCTAGYTAEIIRGGLMAVPAGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ +I   +  L  +++
Sbjct: 198 FICAALIYLFLNFVIVRALGLLETRLS 224


>gi|228476498|ref|ZP_04061188.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|228251919|gb|EEK10965.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
          Length = 515

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 444

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+ +QT Q  +   +   IY  L+  +
Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTV 493



 Score = 36.2 bits (82), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLS---ANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++  G +  T IG ++G  R +   ANK VA       W+  VY+EVFR  P +V  
Sbjct: 301 TLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEVFRGTPMIVQS 360

Query: 146 FFLY 149
             +Y
Sbjct: 361 MVIY 364


>gi|163739483|ref|ZP_02146893.1| amino acid ABC transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
 gi|161387236|gb|EDQ11595.1| amino acid ABC transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
          Length = 432

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 80/132 (60%), Gaps = 4/132 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++  IP
Sbjct: 297 FLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIP 356

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381
            + +  + L K+++L   +   DLV  + G I+  T   G   E++    F++  +   I
Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFIVCYGI 416

Query: 382 ALFMNRLNAKIA 393
           + +   L  ++A
Sbjct: 417 SQYSQWLERRLA 428



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 68  AGFEIDQGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
            GF I +G     SD++  +A+    L GF+    L  + +  +  +G  +  GR S   
Sbjct: 200 GGFLIPEG----ASDNAMLSAVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSNMP 255

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           L+ WIC V++E  R + PL+ + F+   +LS    PD ++ L
Sbjct: 256 LIKWICVVFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 296


>gi|268678765|ref|YP_003303196.1| polar amino acid ABC transporter inner membrane subunit
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268616796|gb|ACZ11161.1| polar amino acid ABC transporter, inner membrane subunit
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 321

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 109/213 (51%), Gaps = 21/213 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +    + +F +G +L+    R+S   H +  K +  +YI+  +I G P LV I +
Sbjct: 123 VTLEISGLAAILAFSMGALLAFM--RIS---HYQFLKDIATIYIA--IIRGTPLLVQIFI 175

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                        F FI  +    E F +  I+L  +  A+IAE++R  + ++ +GQ EA
Sbjct: 176 -------------FYFIIATIFEIERFFAGAISLGLFFGAYIAEVLRGAIQSIDKGQYEA 222

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LG+ + +    +++PQA++  +P L  + + L+K+SSL   +   DL  VG  I+  
Sbjct: 223 AKSLGMNYPQTMLYIIMPQALKRALPTLVGEMIALVKDSSLVSVISITDLTKVGREIVAN 282

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T    E  LI   +Y  ++ ++  F +++  K+
Sbjct: 283 TFSPFETWLIIAAVYFMITFLLTAFGHKIETKM 315


>gi|330811532|ref|YP_004355994.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379640|gb|AEA70990.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 365

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|323174568|gb|EFZ60189.1| L-cystine transport system permease protein tcyB [Escherichia coli
           LT-68]
          Length = 222

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQIM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|197333922|ref|YP_002154779.1| cystine transport system permease protein [Vibrio fischeri MJ11]
 gi|197315412|gb|ACH64859.1| cystine transport system permease protein [Vibrio fischeri MJ11]
          Length = 223

 Score = 76.3 bits (186), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           TM+      +FS +L +VL+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TMEMALWGLLFSLILALVLANL-----RVFKVPVFDQLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    P+     F+G       F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQVFPI-----FVGLDA----FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|258541026|ref|YP_003175525.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152702|emb|CAR91674.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|259651105|dbj|BAI43267.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 535

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 70/110 (63%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++
Sbjct: 390 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             +K++S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+
Sbjct: 450 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTIS 499


>gi|226948691|ref|YP_002803782.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
 gi|226844167|gb|ACO86833.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
          Length = 219

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   AA+++EI+R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + 
Sbjct: 94  IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRFQNLHYIILPQAVKISVPPLVNG 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
           + +LLK++SL   +   +L   G  I ++T +  E+ L     Y  L+ ++++   F+ +
Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEK 213

Query: 388 LNAK 391
            N K
Sbjct: 214 RNEK 217


>gi|206563319|ref|YP_002234082.1| ABC transporter permease [Burkholderia cenocepacia J2315]
 gi|198039359|emb|CAR55324.1| ABC transporter, permease protein [Burkholderia cenocepacia J2315]
          Length = 218

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 22/218 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLI 238
           +T++  A  FV S VLG++L+L   ++SR+    T         ST +  I GLP +V +
Sbjct: 19  VTIEITACAFVLSSVLGLILALL--KVSRNRAVSTAG-------STIVNVIRGLPIIVQL 69

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              + ++F  P LG    +  S      + L IA S Y A    E  R+G+ A+ RGQ+E
Sbjct: 70  ---FYMYFVLPDLG----VQLSAFQAGVLGLGIAYSAYQA----ENFRAGIEAIDRGQIE 118

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A  +  A++   G  I +
Sbjct: 119 AAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIAS 178

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            T Q + +  +   +YL+L + +   +NRL  ++AL+ 
Sbjct: 179 STFQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRR 216


>gi|254284661|ref|ZP_04959628.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|150425446|gb|EDN17222.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
          Length = 298

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLSLSMLFKQVEKR 291


>gi|107028495|ref|YP_625590.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686491|ref|YP_839738.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105897659|gb|ABF80617.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652206|gb|ABK12845.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 248

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAAIIYLGLNFIVVRVLGALEWRLS 224


>gi|317405102|gb|EFV85448.1| amino acids ABC transporter [Achromobacter xylosoxidans C54]
          Length = 229

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 74/119 (62%), Gaps = 10/119 (8%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P L       G  +S  F +L  AL  Y +A+++E++RSG+ 
Sbjct: 70  GMPLLMLIFWAY---FVIPKLT------GQVIS-GFWTLIAALVVYESAYLSEVIRSGIE 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           AVPRGQ+EA+ +LG+ +    R V+LPQA+ +++P +TSQ+++ +K +SL   +   +L
Sbjct: 120 AVPRGQIEASRSLGVGYWTTMRRVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNEL 178


>gi|254475047|ref|ZP_05088433.1| amino acid ABC transporter, permease protein [Ruegeria sp. R11]
 gi|214029290|gb|EEB70125.1| amino acid ABC transporter, permease protein [Ruegeria sp. R11]
          Length = 440

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 81/136 (59%), Gaps = 4/136 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ +++A+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++  IP
Sbjct: 305 FLRVVIMITLFSSAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIP 364

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381
            + +  + L K+++L   +   DLV  + G I+  T   G   E++    F++  +   I
Sbjct: 365 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFVVCYGI 424

Query: 382 ALFMNRLNAKIALKEK 397
           + +   L  ++A   +
Sbjct: 425 SQYSQWLERRLATDHR 440



 Score = 37.4 bits (85), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
            GF I +G        +  +  L GF+    L  + +  +  +G  +  GR S   L+ W
Sbjct: 208 GGFLIPEGASENAMLEAVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSTMPLIKW 267

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           IC V++E  R + PL+ + F+   +LS    PD ++ L
Sbjct: 268 ICVVFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 304


>gi|71734056|ref|YP_274851.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554609|gb|AAZ33820.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 220

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 91/164 (55%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG    I    ++P      + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG----IRLDKLAP----FIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|116496256|ref|YP_807990.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|191639782|ref|YP_001988948.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus casei BL23]
 gi|227532749|ref|ZP_03962798.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|116106406|gb|ABJ71548.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|190714084|emb|CAQ68090.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus casei BL23]
 gi|227189583|gb|EEI69650.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 532

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 70/110 (63%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++
Sbjct: 387 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 446

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             +K++S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+
Sbjct: 447 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSAIYLIMTFTIS 496


>gi|331270072|ref|YP_004396564.1| amino acid ABC transporter permease [Clostridium botulinum
           BKT015925]
 gi|329126622|gb|AEB76567.1| amino acid ABC transporter, permease component [Clostridium
           botulinum BKT015925]
          Length = 215

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 78/124 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  + A+++EI+R G+I++ +GQ EA  +LG T+ +A   V+LPQ  R I+P + ++
Sbjct: 91  IGLSLNSGAYMSEIIRGGIISIDKGQFEACKSLGFTNLQAMTRVILPQTFRIILPSVGNE 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK++SL  A+   +L+      ++ +G+ +E  +I   +YL ++ + ++  + L  
Sbjct: 151 FITMLKDTSLVSAITMEELMRNAELQMSASGRPVEPFIIAAVLYLLMTTVFSVIFSLLEK 210

Query: 391 KIAL 394
           K+++
Sbjct: 211 KMSM 214


>gi|303230413|ref|ZP_07317174.1| ABC transporter, permease protein [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514952|gb|EFL56933.1| ABC transporter, permease protein [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 218

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 1/120 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++ EI R G+ ++PRGQ E A  LG T+ +  R ++LPQ  + ++PPL ++ +NLLK+
Sbjct: 100 AAYLCEIFRGGIQSIPRGQYEGAKVLGFTYGQTMRTIILPQMFKRVLPPLANETINLLKD 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SL   +   D++ +  +I+ Q    I   L+    YL  + ++    N L  + ++ ++
Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAAIFYLIFTFILTNIFNYLEKRFSVYDE 218


>gi|170735091|ref|YP_001774205.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169821129|gb|ACA95710.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 248

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAAIIYLGLNFIVVRVLGALEWRLS 224


>gi|2961078|gb|AAC05642.1| unknown [Pseudomonas marginalis pv. alfalfae]
          Length = 365

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A++AE+VR GL A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|329297839|ref|ZP_08255175.1| glutamine ABC transporter permease protein [Plautia stali symbiont]
          Length = 218

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 104/196 (53%), Gaps = 13/196 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G ++ L A    R    K  K L L+++   LI G P +V +   Y   F  P++     
Sbjct: 33  GFIIGLLAGT-CRALGGKIAKTLSLIFVE--LIRGTPIMVQVMFIY---FALPMVLPIRI 86

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                V+   +++ I     ++A+IAEI R  ++++ RG  EA++A+GL+ R     V++
Sbjct: 87  ---DPVTAAIVTIVIN----SSAYIAEITRGAILSINRGFKEASLAMGLSQRGTLWYVIM 139

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R +IP L +Q++  +K++SL + +G A+L   G  II    +A+E+      IYL 
Sbjct: 140 PLALRRMIPALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLL 199

Query: 377 LSIMIALFMNRLNAKI 392
           +++ ++  + +L  +I
Sbjct: 200 VTLCLSFLLKQLEKRI 215



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 34/60 (56%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           ++ SG++   IIG L G  R    K+   +  ++VE+ R  P +V + F+Y ++  VLPI
Sbjct: 25  ISLSGLLGGFIIGLLAGTCRALGGKIAKTLSLIFVELIRGTPIMVQVMFIYFALPMVLPI 84


>gi|239630711|ref|ZP_04673742.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301067862|ref|YP_003789885.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|239526994|gb|EEQ65995.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300440269|gb|ADK20035.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
 gi|327383896|gb|AEA55372.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei LC2W]
 gi|327387077|gb|AEA58551.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei BD-II]
          Length = 535

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 70/110 (63%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++
Sbjct: 390 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 449

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             +K++S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+
Sbjct: 450 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSAIYLIMTFTIS 499


>gi|168186416|ref|ZP_02621051.1| amino acid ABC transporter, permease component [Clostridium
           botulinum C str. Eklund]
 gi|169295523|gb|EDS77656.1| amino acid ABC transporter, permease component [Clostridium
           botulinum C str. Eklund]
          Length = 215

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  + A+++EI+R G++++ +GQ EA  +LG T+ +    V+LPQA R I+P + ++
Sbjct: 91  IGLSLNSGAYMSEIIRGGIVSIDKGQFEACKSLGFTNIQTMTKVILPQAFRVILPSVGNE 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK++SL  A+   +L+      ++ TG  +E  LI   +YL   +M  +F    N 
Sbjct: 151 FITMLKDTSLVSAITMEELMRNAQLQMSSTGSPVEPFLIAGLLYL---LMTTVF----NV 203

Query: 391 KIALKEKK 398
             +L EK+
Sbjct: 204 IFSLTEKR 211



 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L    +I  +IIG +V   +LS NK+V +I   Y  +FR  P  + +FF 
Sbjct: 13  LLKGSVITIELTVISVILGSIIGVIVAGLKLSNNKIVVYIVSFYTWIFRGTPMFLQLFFF 72

Query: 149 Y 149
           Y
Sbjct: 73  Y 73


>gi|154174248|ref|YP_001407878.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           curvus 525.92]
 gi|112803416|gb|EAU00760.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter curvus 525.92]
          Length = 236

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 72/105 (68%), Gaps = 5/105 (4%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +T S  F    IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL++  + R ++ PQA
Sbjct: 101 ATWSDNFYVAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLSYSASMREIIFPQA 160

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++I+P L +++++L K +S+   VG+  ++ +  T  +++ QAI
Sbjct: 161 IKNILPALGNEFISLFKETSV---VGYISVMDI--TFQSKSFQAI 200


>gi|327331111|gb|EGE72851.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Propionibacterium acnes HL097PA1]
          Length = 314

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 5/154 (3%)

Query: 224 ISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           + T L+F GL  ++   L   + F  P   Q   I    V     +  I L     A++A
Sbjct: 112 VYTQLVFWGLLAVLYPTLSIGVPFSGP---QLASIETKKVVTALAAAIIGLGLNEGAYLA 168

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+RSGL +V  GQ EAA ALG+      R V++PQAMR IIPPL ++ + +LK +SL +
Sbjct: 169 EIIRSGLESVDAGQSEAAKALGMKPSLIMRRVIIPQAMRVIIPPLGNETIGMLKTTSLVL 228

Query: 343 AVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           AV F  DL      I N+    I ++++  F YL
Sbjct: 229 AVPFTLDLQYATSAIANRIYAPIPLLIVAAFWYL 262


>gi|167036207|ref|YP_001671438.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862695|gb|ABZ01103.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 219

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 63/103 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L+ + A+ + E+VR  L ++PRGQ EA +++GL   +    VLLPQA++ +
Sbjct: 88  PSFWCAVLVLALWGASEVGEVVRGALRSLPRGQREAGLSIGLAGWQLYGYVLLPQALKRM 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            PP  + Y  ++K SSLAV +G  +++  G  II +T +++ I
Sbjct: 148 TPPTINIYTRIIKTSSLAVLIGVVEVIKAGQQIIERTYESVLI 190


>gi|90419551|ref|ZP_01227461.1| amino acid ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336488|gb|EAS50229.1| amino acid ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 499

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 60/87 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + +   + ++ ++AA++AE++R GL A+P+GQ E A A+ LT+ +  R+++LPQA+  +I
Sbjct: 361 QLLRALVGVALFSAAYMAEVIRGGLQAIPKGQYEGADAMALTYWQKMRMIILPQALTLVI 420

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351
           P + + ++ L K++SL   +G ADL+ 
Sbjct: 421 PGIVNTFIGLFKDTSLVYIIGLADLLG 447


>gi|91789744|ref|YP_550696.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698969|gb|ABE45798.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 222

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E +S  I    + AA+ +EI+R+G+ ++ RGQ+ A  ALG+T+ +  RLV+LPQ
Sbjct: 86  GRPIGAE-LSAIITFVAFEAAYFSEIMRAGIQSISRGQVHAGQALGMTYGQNMRLVVLPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R+++P L +Q + L +++SL  A+G  DL+    T     G+  E  L+   +Y  + 
Sbjct: 145 AFRNMVPILLTQTIILFQDTSLVYAIGAYDLLKGLTTAGKIYGRPEEAYLLAAVVYFVMC 204

Query: 379 IMIALFMNRLNAKIAL 394
             ++  + +L  KIA+
Sbjct: 205 FGLSYVVKQLQNKIAI 220


>gi|37524241|ref|NP_927585.1| hypothetical protein plu0221 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783664|emb|CAE12516.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 247

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+  T+A++A  V++G+IA+  GQ +A ++LG    +    ++LPQA+R +
Sbjct: 94  PEITTVVCALALITSAYLAHGVKAGIIAIGAGQWQAGLSLGFNRWQVLWYIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG A+L  +   + N++     E+ L    IY  + + + 
Sbjct: 154 VPSFINQWIALIKDTSLAYIVGVAELSFLATQVNNRSMVYPTEVFLFVALIYFVMCLALE 213

Query: 383 LFMNRLNAKIALKEKK 398
           L  N L  +  L+ +K
Sbjct: 214 LTANYLVRRFTLQRRK 229


>gi|309809954|ref|ZP_07703802.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169742|gb|EFO71787.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 422

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 28/210 (13%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245
           I +FS ++G++L   L   RLS H   K    +P + YI   LI G P +V I   Y   
Sbjct: 229 ITIFSVLIGVILGTILALMRLSSHLALK----IPAICYIE--LIRGTPQMVQILFVY--- 279

Query: 246 FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F  G+ +      ++  IA+   + A++AE +RSG+ ++P GQ EAA +L
Sbjct: 280 ----------FGIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSL 329

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+     R V++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q 
Sbjct: 330 GLSKAATYRYVVIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQG 389

Query: 364 IEIILIWMFIY----LSLSIMIALFMNRLN 389
           +  +++ M IY     +L+ +++    R+N
Sbjct: 390 VFPLVVAMAIYFIMTFTLTRILSYMERRMN 419


>gi|228931858|ref|ZP_04094754.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228827838|gb|EEM73576.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 233

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A+I EI R  + ++ RGQ+EAA +LG+ +  A R ++LPQA R  IPPL +Q
Sbjct: 92  IALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSIPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L  
Sbjct: 152 FIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEK 211

Query: 391 KIALKE 396
           ++  KE
Sbjct: 212 RLQRKE 217


>gi|221198891|ref|ZP_03571936.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD2M]
 gi|221205151|ref|ZP_03578167.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD2]
 gi|221174942|gb|EEE07373.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD2]
 gi|221181342|gb|EEE13744.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD2M]
          Length = 257

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAAVIYLGLNFIVVRLLGALEWRLS 224


>gi|111023725|ref|YP_706697.1| glutamate transport system permease protein GluD [Rhodococcus
           jostii RHA1]
 gi|110823255|gb|ABG98539.1| glutamate transport system permease protein GluD [Rhodococcus
           jostii RHA1]
          Length = 299

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 22/129 (17%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC-------YTAAFIAEI 284
           +P L+L+   YQL  +  V               F S Y+AL+        Y  + IAEI
Sbjct: 116 IPVLILMIFSYQLFAEYEV---------------FKSKYLALAAVIVGLTLYNGSVIAEI 160

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++P+GQ EAA+ALG+   +  R +LLPQA+ +++P + SQ +  LK+S+L   +
Sbjct: 161 VRAGINSLPKGQSEAAMALGMRKGQVMRTILLPQAVTAMLPAIISQMVVALKDSALGYLI 220

Query: 345 GFADLVSVG 353
           G+ ++V  G
Sbjct: 221 GYVEVVRSG 229


>gi|16264463|ref|NP_437255.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|15140600|emb|CAC49115.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 228

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 93/173 (53%), Gaps = 13/173 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY++  +I   P LVL+   Y   F  P LG    +G      +  S    L+ Y+ A++
Sbjct: 67  LYVT--VIRNTPILVLVLFSY---FALPELGVR--LG------KIESFVATLAIYSGAYL 113

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R GLIA+P GQ EA +A+GLT  +    +++P  +RS++P L S  ++L K++SLA
Sbjct: 114 AEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLA 173

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+   +L      I  +T + IE  ++   +Y++   ++A  M     ++A+
Sbjct: 174 AAIAVPELTFEARKINVETFRVIETWIVASCLYVATCSLLAALMRAAERRLAV 226


>gi|254250402|ref|ZP_04943721.1| amino acid ABC transporter permease protein [Burkholderia
           cenocepacia PC184]
 gi|124879536|gb|EAY66892.1| amino acid ABC transporter permease protein [Burkholderia
           cenocepacia PC184]
          Length = 248

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAAIIYLGLNFIVVRVLGALEWRLS 224


>gi|329724901|gb|EGG61404.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU144]
          Length = 487

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 60/80 (75%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQ EAA +LGL +R+  + V++PQA++ I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTMQSVVMPQAIKKILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G ++++
Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439



 Score = 39.7 bits (91), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 27/145 (18%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           FS++KF  + +   I+V     +LL  +     N   +N+++ NL              I
Sbjct: 216 FSKIKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256

Query: 73  DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           DQ +     D        S Y    + G  NT  ++  G++  +I+G+ +   ++S  + 
Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGNFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRP 316

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           +  I  +Y+E  R  P LV +F ++
Sbjct: 317 LQLIASIYIEFLRGTPMLVQVFIVF 341


>gi|325964296|ref|YP_004242202.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470383|gb|ADX74068.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 263

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 78/131 (59%), Gaps = 4/131 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L    +A+IAE +R+GL AVP+GQ+EAA +LG+   +A   +++PQA + ++PPLT++
Sbjct: 133 VSLGMVASAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVTIVIPQAFKIVLPPLTNE 192

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K+SSL   +G      +L   G   I+  G  +  +L+    YL ++I ++L   
Sbjct: 193 IILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFYLVITIPLSLLAR 252

Query: 387 RLNAKIALKEK 397
           +  ++ A  ++
Sbjct: 253 KFESRSARTKR 263


>gi|322411919|gb|EFY02827.1| cystine transport system permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 216

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 11/164 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P +V++   + L+F  P  G           P  +  Y+  S  +AA+I+E+ RS + 
Sbjct: 63  GVPMIVVL---FVLYFGLPYYG--------LELPALLCAYLGFSMVSAAYISEVFRSSIE 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSLA  +   D+ 
Sbjct: 112 AIDKGQWEAAKALGLPYSLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVPDIF 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 172 QNSKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|293366163|ref|ZP_06612849.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319685|gb|EFE60045.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 472

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 60/80 (75%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQ EAA +LGL +R+  + V++PQA++ I+P L ++
Sbjct: 347 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTMQSVVMPQAIKKILPALGNE 406

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G ++++
Sbjct: 407 FVTLIKESSIVSTIGVSEIM 426



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 27/145 (18%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           FS++KF  + +   I+V     +LL  +     N   +N+++ NL              I
Sbjct: 203 FSKIKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 243

Query: 73  DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           DQ +     D        S Y +  + G  NT  ++  G++  +I+G+ +   ++S  + 
Sbjct: 244 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRP 303

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           + WI  +Y+E  R  P LV +F ++
Sbjct: 304 LQWIASIYIEFLRGTPMLVQVFIVF 328


>gi|293400689|ref|ZP_06644834.1| amino acid ABC transporter, permease/substrate-binding protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305715|gb|EFE46959.1| amino acid ABC transporter, permease/substrate-binding protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 510

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 81/129 (62%), Gaps = 4/129 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +S+ +AL   ++A++AEI+R G+++V +GQ EAA +LG++++     ++ PQA++SI
Sbjct: 378 PMMVSVIVALIINSSAYVAEIIRGGILSVDKGQWEAAKSLGMSNQHMMVKIIFPQAIKSI 437

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL----SLSI 379
           +P L ++++ ++K +SLA +    +L+SV   +   T  ++E + I   IYL    SLS 
Sbjct: 438 LPSLGNEFIMMVKETSLASSFYIGELMSVNNIVKTATYFSLEPLTIAAIIYLIVTYSLSK 497

Query: 380 MIALFMNRL 388
           ++     R+
Sbjct: 498 LVKYMERRM 506


>gi|157150410|ref|YP_001450999.1| amino acid-binding permease protein [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157075204|gb|ABV09887.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 521

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVIRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G TI  QT +  +   I   IY  L+  I
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYKYFQTFTIIAVIYFVLTFTI 491


>gi|311071018|ref|YP_003975941.1| cystine ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310871535|gb|ADP35010.1| cystine ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 234

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 29/213 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLH 245
           + SF+ G++++L  T L+R       K  PL     +Y+S   + G P LV      QL 
Sbjct: 40  ILSFIFGMIIAL-VTALAR-----MSKITPLRWVFGVYVSA--VRGTPLLV------QLF 85

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
               +   FN     T+ P F S  IA S    A+ +EI+R+ +++VP+GQ EA   +G+
Sbjct: 86  IIFYMFPAFNI----TLDP-FPSAIIAFSLNVGAYASEIIRASILSVPKGQWEAGYTIGM 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQTG 361
           TH+K    V+LPQA R  IPPL++ +++L+K++SLA  +   +L      +G   ++Q  
Sbjct: 141 THQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVVELFRKAQEIGARNLDQIL 200

Query: 362 QA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              IE   I+  I   LS+   L   RL+  +A
Sbjct: 201 VIYIEAAFIYWIICSLLSLAQHLIERRLDRYVA 233


>gi|199597698|ref|ZP_03211126.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|258509843|ref|YP_003172594.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus
           GG]
 gi|199591505|gb|EDY99583.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|257149770|emb|CAR88743.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus GG]
          Length = 532

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 70/110 (63%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++
Sbjct: 387 VSINTGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFI 446

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             +K++S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+
Sbjct: 447 VNIKDTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTIS 496


>gi|328477583|gb|EGF47645.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus MTCC 5462]
          Length = 486

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L+                      GS + P F++  I L+  
Sbjct: 332 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 368

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 369 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 428

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+   +G  +L   G  II +  +  +I  +   IYL
Sbjct: 429 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 467


>gi|307320838|ref|ZP_07600248.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306893548|gb|EFN24324.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 220

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 73/122 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ Y+ A++AE+ R GLIA+P GQ EA +A+GLT  +    +++P  +RS++P L S  +
Sbjct: 97  LAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMI 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L K++SLA A+   +L      I  +T + IE  ++   +Y++   ++A  M     ++
Sbjct: 157 SLFKDTSLAAAIAVPELTFEARKINVETFRVIETWIVASCLYVATCSLLAALMRAAERRL 216

Query: 393 AL 394
           A+
Sbjct: 217 AV 218


>gi|57867284|ref|YP_188964.1| amino acid ABC transporter, permease/amino acid-binding protein,
           putative [Staphylococcus epidermidis RP62A]
 gi|251811199|ref|ZP_04825672.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875757|ref|ZP_06284624.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|57637942|gb|AAW54730.1| amino acid ABC transporter, permease/amino acid-binding protein,
           putative [Staphylococcus epidermidis RP62A]
 gi|251805280|gb|EES57937.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294782|gb|EFA87309.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|329734283|gb|EGG70598.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU045]
 gi|329737224|gb|EGG73478.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU028]
          Length = 485

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 60/80 (75%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQ EAA +LGL +R+  + V++PQA++ I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTMQSVVMPQAIKKILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G ++++
Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 27/145 (18%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           FS++KF  + +   I+V     +LL  +     N   +N+++ NL              I
Sbjct: 216 FSKIKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256

Query: 73  DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           DQ +     D        S Y +  + G  NT  ++  G++  +I+G+ +   ++S  + 
Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRP 316

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           + WI  +Y+E  R  P LV +F ++
Sbjct: 317 LQWIASIYIEFLRGTPMLVQVFIVF 341


>gi|326693633|ref|ZP_08230638.1| glutamine ABC transporter, permease protein [Leuconostoc argentinum
           KCTC 3773]
          Length = 213

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IA     AA++AEI R GL A+PRGQ +AA  LG T  +    ++LPQ ++ I
Sbjct: 82  PRFEAATIAFIVNYAAYLAEIFRGGLQAIPRGQYDAAKVLGFTRVQTFFKIILPQVIKII 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   ++ +NL+K++SL   +G  DL+  G    ++    +  +L+ + IYL ++ ++ +
Sbjct: 142 VPSFGNEVINLVKDTSLVYVIGLGDLLRAGNIAASRDVTLVPYLLVGL-IYLLMTAVVTV 200

Query: 384 FMNRLNAKI 392
            + R   ++
Sbjct: 201 LLRRSETQL 209


>gi|303228628|ref|ZP_07315454.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516720|gb|EFL58636.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 218

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 69/120 (57%), Gaps = 1/120 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++ EI R G+ ++PRGQ E A  LG T+ +  R ++LPQ  + ++PPL ++ +NLLK+
Sbjct: 100 AAYLCEIFRGGIQSIPRGQYEGAKVLGFTYGQTMRTIILPQMFKRVLPPLANETINLLKD 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SL   +   D++ +  +I+ Q    I   L+    YL  + ++    N L  + ++ ++
Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAAIFYLIFTFILTNIFNYLEKRFSVYDE 218


>gi|229551204|ref|ZP_04439929.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315496|gb|EEN81469.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 498

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L+                      GS + P F++  I L+  
Sbjct: 344 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 380

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 381 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 440

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+   +G  +L   G  II +  +  +I  +   IYL
Sbjct: 441 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 479


>gi|13476743|ref|NP_108312.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14027504|dbj|BAB53773.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 385

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 60/88 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   I +S + AA++AE+VR GL A+P+GQ E A +LGL + +   L++LPQA+R +I
Sbjct: 247 KFLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMGLIVLPQALRLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ + K++SL + +   DL+ V
Sbjct: 307 PGIVNTFIGMFKDTSLVLIISMFDLLGV 334



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +P+   S +      G + T  L+F G+  +  +GT++  GR S   +V  +C V++E  
Sbjct: 165 LPHVETSRWG-----GLLVTLSLSFVGIAVSLPLGTVLALGRRSKMPIVKTLCVVFIETV 219

Query: 137 RNIPPLVVIFFL 148
           R IP + V+FF+
Sbjct: 220 RGIPLITVLFFV 231


>gi|313836987|gb|EFS74701.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA2]
 gi|314929423|gb|EFS93254.1| ABC transporter, permease protein [Propionibacterium acnes
           HL044PA1]
 gi|314971493|gb|EFT15591.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA3]
 gi|328906825|gb|EGG26591.1| ABC-type transport system, permease protein [Propionibacterium sp.
           P08]
          Length = 314

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 1/109 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A++AEI RSGL +V  GQ EAA ALG+      R V++PQAMR IIPPL ++
Sbjct: 157 IGLGLNEGAYLAEITRSGLESVDAGQTEAAKALGMKPSLIMRRVIIPQAMRVIIPPLGNE 216

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + +LK +SL +AV F  DL      I N+    I ++++  F YL ++
Sbjct: 217 TIGMLKTTSLVLAVPFTLDLQYATSAIANRIYAPIPLLIVAAFWYLVMT 265


>gi|308177957|ref|YP_003917363.1| glutamate ABC transporter inner membrane subunit GluD [Arthrobacter
           arilaitensis Re117]
 gi|307745420|emb|CBT76392.1| glutamate ABC transporter, inner membrane subunit GluD
           [Arthrobacter arilaitensis Re117]
          Length = 303

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 80/131 (61%), Gaps = 5/131 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  Y  + +AE+VRSG+  +PRGQ EA IA+GLT   + R + +PQA+ +++P L  Q+
Sbjct: 145 ALVFYNGSVVAELVRSGVHNLPRGQREAGIAIGLTRGMSLRHIEIPQALVAMLPALIGQF 204

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNR 387
           + +LK+S+L   + F +L+    T  +  G  ++ ++    I++ I  +LS +  L  +R
Sbjct: 205 VVILKDSALGYIISFNELLFFARTYSSPNGNVLQALIVAAAIFILINFTLSKIAVLVSSR 264

Query: 388 LNAKIALKEKK 398
           L++++  KEK 
Sbjct: 265 LSSRVK-KEKN 274



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 39/69 (56%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   S++   +L G  NT   A  G+I + I G + G GRLS NKL+   C V VE FR 
Sbjct: 54  FIEGSTWKNYLLPGLWNTLKAALFGIIGSVIFGLIFGVGRLSQNKLINGFCTVIVEFFRA 113

Query: 139 IPPLVVIFF 147
           +P L++I F
Sbjct: 114 VPVLLMIVF 122


>gi|167567070|ref|ZP_02359986.1| glutamine ABC transporter permease protein [Burkholderia
           oklahomensis EO147]
 gi|167574147|ref|ZP_02367021.1| glutamine ABC transporter permease protein [Burkholderia
           oklahomensis C6786]
          Length = 218

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F++G+V  +F     R +       L  +YI   LI G P +V +     L+F  P+L 
Sbjct: 33  GFLVGMVAGMF-----RAYGPAALNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 82

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                G         +  +A++  + A++AE+VR  L+++P+G  EA +A+GL+  +   
Sbjct: 83  HIRIDG-------LTAAIVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI      
Sbjct: 136 KIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWSAVAA 195

Query: 373 IYLSLS 378
           IYL L+
Sbjct: 196 IYLVLT 201


>gi|114771235|ref|ZP_01448655.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [alpha proteobacterium HTCC2255]
 gi|114548160|gb|EAU51047.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [alpha proteobacterium HTCC2255]
          Length = 434

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 56/78 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+P+GQ EAA +LGL + KA RL+++PQA++  IP + S 
Sbjct: 306 IMVTLFASAYMAEVVRGGLAALPKGQYEAADSLGLDYWKAQRLIIMPQALKISIPGIVST 365

Query: 331 YLNLLKNSSLAVAVGFAD 348
           ++ L K+++L   +G  D
Sbjct: 366 FIGLFKDTTLVSIIGLLD 383


>gi|254720342|ref|ZP_05182153.1| amino acid ABC transporter, permease protein [Brucella sp. 83/13]
 gi|306837436|ref|ZP_07470312.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|306407479|gb|EFM63682.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 226

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 77/126 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 149 PLSNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|85717303|ref|ZP_01048257.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           sp. Nb-311A]
 gi|85695892|gb|EAQ33796.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           sp. Nb-311A]
          Length = 506

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 63/97 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+      + + I ++ +  A+ AE++R GL A+P GQ EAA ALGL++ K T L++
Sbjct: 359 FLPGNFTIDGLVRVLIGIALFAGAYNAEVIRGGLAAIPSGQAEAAHALGLSYWKTTGLIV 418

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           +PQA+R++IP L + ++ L K++SL   V   DL+ +
Sbjct: 419 MPQAVRNVIPGLVNSFIALFKDTSLVSIVALFDLLGI 455


>gi|146294116|ref|YP_001184540.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           putrefaciens CN-32]
 gi|145565806|gb|ABP76741.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella putrefaciens CN-32]
          Length = 226

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 76/123 (61%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     + ++LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAITMKSIILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++F+  S + M++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFMLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|258541041|ref|YP_003175540.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152717|emb|CAR91689.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 486

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L+                      GS + P F++  I L+  
Sbjct: 332 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 368

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 369 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 428

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+   +G  +L   G  II +  +  +I  +   IYL
Sbjct: 429 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 467


>gi|229528069|ref|ZP_04417460.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229334431|gb|EEN99916.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
          Length = 298

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQMISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLSLSMLFKQVERR 291


>gi|27468459|ref|NP_765096.1| glutamine-binding periplasmic protein [Staphylococcus epidermidis
           ATCC 12228]
 gi|27316006|gb|AAO05140.1|AE016749_86 glutamine-binding periplasmic protein [Staphylococcus epidermidis
           ATCC 12228]
          Length = 485

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 60/80 (75%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQ EAA +LGL +R+  + V++PQA++ I+P L ++
Sbjct: 360 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYRQTMQSVVMPQAIKKILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G ++++
Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 27/145 (18%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           FS++KF  + +   I+V     +LL  +     N   +N+++ NL              I
Sbjct: 216 FSKIKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256

Query: 73  DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           DQ +     D        S Y +  + G  NT  ++  G++  +I+G+ +   ++S  + 
Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRP 316

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           + WI  +Y+E  R  P LV +F ++
Sbjct: 317 LQWIASIYIEFLRGTPMLVQVFIVF 341


>gi|152994477|ref|YP_001339312.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835401|gb|ABR69377.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 506

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 7/172 (4%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +L   LP LVL+   Y +    P L  F   GG    P F +  IA+    +A++AEI R
Sbjct: 62  WLFRSLPLLVLLIFVYNM----PQL--FPSTGGLLSDP-FWAGLIAMVMCESAYVAEIHR 114

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL+++P+GQ EAA ALG+    A  L+++PQA+R  +P LT++++ ++K SSL   +  
Sbjct: 115 GGLLSIPKGQSEAARALGIRFAGAQWLIVIPQALRVALPSLTNEFIAIVKLSSLVSVISL 174

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +++ VG  +  Q    +E +      Y+ +  +    + +L + + + ++K
Sbjct: 175 TEVLMVGQRLYTQNFLVLETMAAVAIYYVLIVTIFDFLLGQLESYLDVTKRK 226


>gi|322420357|ref|YP_004199580.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320126744|gb|ADW14304.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 266

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 14/176 (7%)

Query: 219 LPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++      LI G P LV I + + +  D   +G    +G            + L+ 
Sbjct: 97  LPLRFLGKIYIELIRGTPLLVQILVFFYVVADAFGIGNRYLVG-----------ILTLAL 145

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A+I+EI+R+G+ ++   Q+E+A A+GLT R+  R V+ PQ MR I+PPL  Q+ +L+
Sbjct: 146 FAGAYISEIIRAGIESIGESQLESARAIGLTRRQTYRFVVFPQVMRRILPPLAGQFASLI 205

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           K+SSL   +  ++       +   T   +E  L     YL+L++ I++    L  +
Sbjct: 206 KDSSLLSIIAVSEFTLNAQEVNAFTYSTMESYLPLALGYLALTLPISMLSRYLEGR 261


>gi|254469435|ref|ZP_05082840.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211961270|gb|EEA96465.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 555

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 72/111 (64%), Gaps = 6/111 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGL 289
           G+P LV+I     L+   P+ G         ++   M+  I A+S   +A++AEI R+G+
Sbjct: 392 GIPMLVII-----LYVGLPLSGAIKSASDGAINLSNMTRGIVAISIGYSAYMAEIFRAGI 446

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AVP+GQ+EAA +LGL+  +  R V+LPQA+  +IPPL ++++ +LK++SL
Sbjct: 447 LAVPKGQIEAARSLGLSRWQVARFVVLPQALSIVIPPLGNEFIAMLKDTSL 497


>gi|54302944|ref|YP_132937.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
 gi|46916372|emb|CAG23137.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 315

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 68/117 (58%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q    G S +     S  + +   +AA+IAEI+RSGL A+ +GQ EAA +LGL+     +
Sbjct: 170 QHFLFGSSKLWENLFSGVLCVGLISAAYIAEIIRSGLDAIAKGQWEAADSLGLSRWSRFK 229

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            V+ PQA   ++PPL  Q+++L+K+SS+   +   ++  VG  + N +G   EI L+
Sbjct: 230 DVIFPQAFAGVVPPLAGQFISLVKDSSIISLISIQEMTFVGSEMANSSGLIFEIWLL 286


>gi|317125235|ref|YP_004099347.1| amino acid ABC transporter permease [Intrasporangium calvum DSM
           43043]
 gi|315589323|gb|ADU48620.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 221

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 54/79 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS Y AAF+ E +RSG+  VP GQ EAA ++GLT  ++ R V+LPQ  R  I PL + 
Sbjct: 95  IALSVYHAAFVCEAIRSGVNTVPVGQAEAARSIGLTFAQSLRDVVLPQGFRGAITPLGNT 154

Query: 331 YLNLLKNSSLAVAVGFADL 349
            + L KN+++A A+G A++
Sbjct: 155 LIALTKNTTVATAIGVAEV 173


>gi|260465476|ref|ZP_05812666.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259029780|gb|EEW31066.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 513

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 24/214 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   VLG++L++     SR         +P   + T +  GLP +V I L          
Sbjct: 41  VIGVVLGMILAVMGISQSRWLR------IPA-RVYTDIFRGLPAIVTILL---------- 83

Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L I ALS    A+I EI RSG+ +V RGQMEA  AL +++ 
Sbjct: 84  IGQGFARIGREIFGPSPYPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAI 364
           +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      TG   
Sbjct: 144 QGMRLIVVPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGNLS 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++L  +F YL +++ +   +N ++  + + ++K
Sbjct: 204 PLLLAGVF-YLVITVPLTHVVNYIDNSLRVGKQK 236


>gi|217977865|ref|YP_002362012.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylocella silvestris BL2]
 gi|217503241|gb|ACK50650.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylocella silvestris BL2]
          Length = 384

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 65/114 (57%), Gaps = 10/114 (8%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL A+P GQ E A ALGL   +  RLV+LPQA+R++IP + + 
Sbjct: 252 IGVALFASAYMAEVVRGGLQAIPSGQFEGAEALGLGRWQTQRLVILPQALRAVIPGVVNN 311

Query: 331 YLNLLKNSSLAVAVGFADLVSV----------GGTIINQTGQAIEIILIWMFIY 374
           ++ L K+++L   VG  D +             G  I  TG A   +  ++F +
Sbjct: 312 FIALFKDTTLVAVVGIFDFLRTVDSARLDPVWAGPTIATTGYAFAAMFYFVFCF 365


>gi|330991448|ref|ZP_08315399.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Gluconacetobacter sp. SXCC-1]
 gi|329761467|gb|EGG77960.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Gluconacetobacter sp. SXCC-1]
          Length = 522

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 89/176 (50%), Gaps = 8/176 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G PTL+      QL F    L QF  I        F++ +I+LS   +A+  
Sbjct: 348 YVSVFR--GAPTLL------QLLFIWNALPQFLPIFREGWFTPFLATWISLSINESAYQV 399

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+ L AV RGQ  A  ALGL+ R+  R V+ PQA+R  +PP  + +++LLK +SLA 
Sbjct: 400 EINRAALAAVDRGQELAGDALGLSRRQVYRHVIFPQALRIALPPTMNAFISLLKTTSLAS 459

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +L++V    + +T +  E     +  YL +   +     R+  + A  ++ 
Sbjct: 460 VISLPELLAVTQMEVARTFEFTEYYAAALVYYLGMVFFLLFVQKRIERRFAWADRH 515


>gi|301169820|emb|CBW29424.1| predicted transporter subunit: membrane component of ABC
           superfamily [Haemophilus influenzae 10810]
          Length = 225

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I   + + +  P
Sbjct: 32  FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 86

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+
Sbjct: 87  EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V     N T    E ILI
Sbjct: 139 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 195

Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393
           +     IY     +++   +RL  +++
Sbjct: 196 YSEAALIYWVFCFVLSFLQDRLEIRLS 222


>gi|269966666|ref|ZP_06180745.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269828733|gb|EEZ82988.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 306

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 1/160 (0%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L L  L    + +   L  F F G S +     S  + +   ++A+IAE+VR GL +
Sbjct: 142 IPLLGLEDLLRNYNGEPNTLQHFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRGGLQS 200

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EA+ +LGL+     R V+ PQ ++SI P L  Q ++L+K++S+   +   ++  
Sbjct: 201 IDQGQWEASDSLGLSRWVKYRFVIAPQVLKSITPALAGQTISLVKDTSIVSLISIQEMTF 260

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  + N +G   EI LI    Y  +   ++L    + AK
Sbjct: 261 VGTEMANSSGYIFEIWLIVGLAYFLICFGLSLIFRHIEAK 300


>gi|253681319|ref|ZP_04862117.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           D str. 1873]
 gi|253562557|gb|EES92008.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           D str. 1873]
          Length = 235

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 58/80 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+  + A++AEI+R G+ ++ +GQMEAA +LGLT   A R V++PQA+++I+P L ++
Sbjct: 110 ITLALNSTAYVAEIIRGGIESINKGQMEAARSLGLTQSMAMRYVIIPQAIKNILPALGNE 169

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ ++K SS+   VG  +L+
Sbjct: 170 FITVIKESSIVSVVGIKELM 189


>gi|218548545|ref|YP_002382336.1| ABC transporter permease [Escherichia fergusonii ATCC 35469]
 gi|218356086|emb|CAQ88703.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia fergusonii ATCC 35469]
 gi|324113636|gb|EGC07611.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia fergusonii B253]
 gi|325496962|gb|EGC94821.1| transporter subunit: permease component of ABC superfamily
           transporter [Escherichia fergusonii ECD227]
          Length = 222

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS       G   PL +++ F I       LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLS-----PVG---PLRWLARFYISIFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-VPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNYFENQLNRQERE 220



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   RLS    + W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFILALMRLSPVGPLRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + P+P   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPVPSAMI----GLSLNTAAYAAETL 107


>gi|289168650|ref|YP_003446919.1| ABC transporter permease and substrate-binding protein, amino acid
           transport [Streptococcus mitis B6]
 gi|288908217|emb|CBJ23059.1| ABC transporter permease and substrate-binding protein, amino acid
           transport [Streptococcus mitis B6]
          Length = 521

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG++H +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMSHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|259651118|dbj|BAI43280.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 498

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L+                      GS + P F++  I L+  
Sbjct: 344 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 380

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 381 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 440

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+   +G  +L   G  II +  +  +I  +   IYL
Sbjct: 441 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 479


>gi|197294964|ref|YP_002153505.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944443|emb|CAR57045.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 248

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 4/147 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPIGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IYL L+ ++   +  L  +++
Sbjct: 198 FVCAAVIYLGLNFIVVRLLGALEWRLS 224


>gi|110633916|ref|YP_674124.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110284900|gb|ABG62959.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chelativorans sp. BNC1]
          Length = 237

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 7/194 (3%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L++   E + +    +Y + F   GLP L+ + L +  +  +  + Q   + G+T 
Sbjct: 42  FTVALAKTSEEPSLRLAANIYTTIFR--GLPELLTLFLVF--YGAQIAVQQITRVLGATA 97

Query: 263 SPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           + E   F++  +AL    +A+ +E+  S   A+PRGQ E A A+GL+ R+  +LV+LPQ 
Sbjct: 98  TIEINAFVAGIVALGAVFSAYASEVFVSAFRAIPRGQYEGAYAVGLSRRRTMQLVILPQL 157

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P L++ +L LLK +SL   +G AD++   G     + +A     I   +YL LS+
Sbjct: 158 IRLALPGLSNLWLILLKETSLVSVIGLADILRQTGIAARVSKEAFLFFGIACLLYLGLSV 217

Query: 380 MIALFMNRLNAKIA 393
           + +   + +  +++
Sbjct: 218 LSSFAFSAIERRVS 231


>gi|257460053|ref|ZP_05625157.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Campylobacter gracilis
           RM3268]
 gi|257442494|gb|EEV17633.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Campylobacter gracilis
           RM3268]
          Length = 234

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 84/144 (58%), Gaps = 13/144 (9%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F FI  +T S    +   AL   ++A++AEIVRSG+ +V RGQMEAA A+GL +  A + 
Sbjct: 93  FVFIIFATWSNNIAAAIFALGLNSSAYVAEIVRSGINSVDRGQMEAARAMGLGYGTAMKE 152

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILI 369
           ++ PQA+++I+P L +++++L K +S+   V   DL     T  +++ QA    ++ IL 
Sbjct: 153 IIFPQAIKNILPALANEFISLFKETSVVGLVAITDL-----TFFSKSMQAALYTVQPILF 207

Query: 370 WMFIYLS----LSIMIALFMNRLN 389
              +Y +     S ++ +  +RLN
Sbjct: 208 AAVLYYASVKFFSFLVKMLESRLN 231


>gi|116627112|ref|YP_819731.1| ABC-type amino acid transport system, permease and periplasmic
           component [Streptococcus thermophilus LMD-9]
 gi|116100389|gb|ABJ65535.1| ABC-type amino acid transport system, permease and periplasmic
           component [Streptococcus thermophilus LMD-9]
          Length = 516

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 444

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   +   IY  L+  +
Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTV 493


>gi|55820257|ref|YP_138699.1| polar amino acid ABC uptake transporter substrate binding
           protein/membrane-spanning protein [Streptococcus
           thermophilus LMG 18311]
 gi|55822147|ref|YP_140588.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease [Streptococcus thermophilus CNRZ1066]
 gi|55736242|gb|AAV59884.1| polar amino acid ABC uptake transporter substrate binding
           protein/membrane-spanning protein [Streptococcus
           thermophilus LMG 18311]
 gi|55738132|gb|AAV61773.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 516

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFV 444

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   +   IY  L+  +
Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTV 493


>gi|295694800|ref|YP_003588038.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295410402|gb|ADG04894.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 224

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 23/191 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           +GL +   T++ +    V   VLG++ +LF    SR       +AL  +Y+  F   G P
Sbjct: 16  KGLGY---TLEYSLYAVVLGTVLGLIFALFRLSGSRIL-----RALGTVYVDIFR--GTP 65

Query: 234 TLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGL 289
            LV I   + ++F  P VL    + G      EF ++    +       A+I EI+R+G+
Sbjct: 66  LLVQI---FFIYFGLPQVLPLHQWFG------EFYTVLAGAAALALNEGAYITEIIRAGI 116

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V +GQ EAA ++G+T  +  R ++LPQA + +IPPL +Q++  +K++SL   +   +L
Sbjct: 117 LSVDKGQWEAAESIGMTSYQKMRYIILPQAFKRMIPPLVNQFIQTIKDTSLLSVISITEL 176

Query: 350 VSVGGTIINQT 360
           V     +I  T
Sbjct: 177 VRAAQIVIVTT 187



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 33/52 (63%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            T++G +    RLS ++++  +  VYV++FR  P LV IFF+Y  +  VLP+
Sbjct: 32  GTVLGLIFALFRLSGSRILRALGTVYVDIFRGTPLLVQIFFIYFGLPQVLPL 83


>gi|254993940|ref|ZP_05276130.1| hypothetical protein LmonocytoFSL_13880 [Listeria monocytogenes FSL
           J2-064]
          Length = 212

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 85  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 144

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 145 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 203

Query: 388 LNAK 391
           L  +
Sbjct: 204 LEKR 207


>gi|167840985|ref|ZP_02467669.1| glutamine ABC transporter permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 218

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F++G++  +F     R +       L  +YI   LI G P +V +     L+F  P+L 
Sbjct: 33  GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 82

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                G         +  +A++  + A++AE+VR  L+++P+G  EA +A+GL+  +   
Sbjct: 83  HIRIDG-------LTAAIVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ P A R +IPPL +Q +  LK++SL + +G  +L   G  II    QA+EI      
Sbjct: 136 KIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 195

Query: 373 IYLSLS 378
           IYL L+
Sbjct: 196 IYLVLT 201


>gi|126641537|ref|YP_001084521.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
          Length = 231

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 74/123 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E VR+G+  V RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 101 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 160

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 161 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKR 220

Query: 392 IAL 394
           +A+
Sbjct: 221 MAV 223



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           G     W A    + A ++G+L+G  R   NK +A+I   YVE+FRNIP +V +FF
Sbjct: 5   GVFTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 60


>gi|294498828|ref|YP_003562528.1| sulfur-containing amino acid ABC transporter permease TcyL
           [Bacillus megaterium QM B1551]
 gi|294348765|gb|ADE69094.1| sulfur-containing amino acid ABC transporter, permease protein TcyL
           [Bacillus megaterium QM B1551]
          Length = 232

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 7/209 (3%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + S V+G  L LF   L R +       +  +YIS   + G P L+ + L +   +  
Sbjct: 27  ILIASLVIGSTLGLFIA-LPRIYKVPVLSQIAAVYIS--FMRGTPILIQLFLVF---YGI 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L Q   I  S ++P  + + I  S  TAA  +E++R  + +V +GQ EAA ++G+T +
Sbjct: 81  PALLQLIHIDVSRMAP-LVFVIITYSLSTAASFSEMMRGAINSVDKGQTEAAYSIGMTGK 139

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA+    P   +  +  LK++SLA  +G  D++  G TII  T  A+E+ +
Sbjct: 140 QTFTRIVLPQALVVAFPNFGNLVIGSLKDTSLAFTIGVMDMMGRGDTIIAATAHAVEVYI 199

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               IY  ++I++  F  +   K+   ++
Sbjct: 200 ALAIIYYFVAIILEKFFVKSEQKLQKHDQ 228


>gi|199599469|ref|ZP_03212861.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|199589641|gb|EDY97755.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
          Length = 475

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L+                      GS + P F++  I L+  
Sbjct: 321 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 357

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 358 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 417

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+   +G  +L   G  II +  +  +I  +   IYL
Sbjct: 418 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 456


>gi|39935696|ref|NP_947972.1| polar amino acid ABC transport system protein AapM-2
           [Rhodopseudomonas palustris CGA009]
 gi|39649549|emb|CAE28071.1| polar amino acid ABC transport system protein, aapM-2
           [Rhodopseudomonas palustris CGA009]
          Length = 360

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 57/81 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +  A++AE+VR GL AVPRGQ EAA+ALGL + ++ RL++LPQA+R+++P L + 
Sbjct: 230 VMLALFWTAYVAEVVRGGLQAVPRGQEEAALALGLGYWRSMRLIVLPQALRAVVPGLVNL 289

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            +  L  +SL   +G  D++ 
Sbjct: 290 GIGFLLATSLLAVIGIMDILG 310


>gi|330984830|gb|EGH82933.1| putative ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. lachrymans str. M301315]
          Length = 420

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 22/236 (9%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG+F +          +  +   +V S VLG VL+L               +LPL+ +  
Sbjct: 9   FGLFSDTEFWMATWTVIQLSVLTWVISIVLGFVLAL-----------AKQSSLPLINLPA 57

Query: 227 ----FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               +L   LP LVL+   Y L    P          + ++  F +  IA+     A++A
Sbjct: 58  KAYIWLFRSLPLLVLLIFVYNLPQAVPA-------TSAVLANPFWAGLIAMVMCETAYVA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL+++ +GQ EAA ALGL        +++PQA+R  +P LT++Y++++K SSL  
Sbjct: 111 EIHRGGLLSIAKGQTEAARALGLRFVGTQWRIVIPQALRVALPSLTNEYISIVKLSSLVS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + + K
Sbjct: 171 VISLTEILMVGQRLYSQNFLVMETMAAVAFYYVLIVTVFDFLLKRLERYLDVTQHK 226


>gi|262283287|ref|ZP_06061053.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA]
 gi|262260778|gb|EEY79478.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA]
          Length = 521

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVIRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G TI  QT +  +   I   IY  L+  I
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTIATQTYKYFQTFTIIAVIYFVLTFTI 491


>gi|258611907|ref|ZP_05711708.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293596367|ref|ZP_05231017.2| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|293596977|ref|ZP_05266174.2| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|300765936|ref|ZP_07075908.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|258607029|gb|EEW19637.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293584368|gb|EFF96400.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|293595255|gb|EFG03016.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300513322|gb|EFK40397.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
          Length = 214

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 87  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 146

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 147 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 205

Query: 388 LNAK 391
           L  +
Sbjct: 206 LEKR 209


>gi|258509858|ref|YP_003172609.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
 gi|257149785|emb|CAR88758.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
          Length = 486

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L+                      GS + P F++  I L+  
Sbjct: 332 RGLPLLVLALFIYTGVPSLI----------------------GSKI-PAFVAGIITLTLN 368

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 369 EGAYTAAFVKGGIQAVDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 428

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+   +G  +L   G  II +  +  +I  +   IYL
Sbjct: 429 DTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYL 467


>gi|296127369|ref|YP_003634621.1| polar amino acid ABC transporter, inner membrane subunit
           [Brachyspira murdochii DSM 12563]
 gi|296019185|gb|ADG72422.1| polar amino acid ABC transporter, inner membrane subunit
           [Brachyspira murdochii DSM 12563]
          Length = 216

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F S  +      +A++ EI R+G+ ++ +GQ EA  AL L++R+    ++LPQA+R +
Sbjct: 85  PAFTSAAVTFILNYSAYLMEIFRAGIESIEKGQYEAGFALNLSYRQIMTRIILPQAVRRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL+++ +NL+K+++L + +G  DL+     I+ +  + +    I   IYL  + ++ L
Sbjct: 145 LPPLSNEAINLIKDTALVIVLGIGDLMLHARQILTRDYKLLP-FFIAAIIYLLFTSILVL 203

Query: 384 FMNRLNAKIALKE 396
              +L  K  ++ 
Sbjct: 204 VFRQLEKKYVIRN 216


>gi|89901741|ref|YP_524212.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89346478|gb|ABD70681.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 217

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F S  +A     +A+ AEI R+G+ ++ RGQ E A  LGL++ +  R ++LPQ ++ I
Sbjct: 85  PDFPSAILAFVLNYSAYFAEIFRAGIQSIDRGQYEGAQVLGLSYPQTMRRIVLPQVLKRI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   DL+     I+ +    +  ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLAMNDLLRAARGIVQRDFTTMPFVVAAAF-YLFMTLVLTY 203

Query: 384 FMNRLNAKIALKEK 397
              RL  K A+ + 
Sbjct: 204 GFQRLEKKYAVYDD 217


>gi|300992026|ref|ZP_07179758.1| glutamine ABC transporter permease protein [Escherichia coli MS
           200-1]
 gi|300305425|gb|EFJ59945.1| glutamine ABC transporter permease protein [Escherichia coli MS
           200-1]
          Length = 219

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 109/206 (52%), Gaps = 12/206 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V     G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  
Sbjct: 25  ISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   FN +    + P F +    +   + A+IAEI R  ++++ +G  EA +ALGL+  
Sbjct: 79  PM--AFNDL---RIDP-FTAAVGTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRW 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI  
Sbjct: 133 ETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
                YL ++++++  + RL  ++ +
Sbjct: 193 AVAVFYLIITLVLSFILRRLERRMKI 218


>gi|312198104|ref|YP_004018165.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311229440|gb|ADP82295.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 214

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + L  YT AF+AE + SG+ +VP GQ EAA +LGLT     R V+LPQA R+++P
Sbjct: 84  FVSAVLVLGGYTGAFVAEALLSGIRSVPVGQAEAARSLGLTFTGTLRHVVLPQAFRAVVP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           PL +    L++N+SLA  +G  +L +  G +
Sbjct: 144 PLGALLSALVRNTSLAAPIGVLELTARAGQL 174


>gi|251781764|ref|YP_002996066.1| ABC transporter amino acid-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390393|dbj|BAH80852.1| ABC transporter amino acid-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 528

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  +
Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507


>gi|46907970|ref|YP_014359.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b F2365]
 gi|226224343|ref|YP_002758450.1| amino acid (glutamine) ABC transporter, permease protein [Listeria
           monocytogenes Clip81459]
 gi|255520514|ref|ZP_05387751.1| hypothetical protein LmonocFSL_04656 [Listeria monocytogenes FSL
           J1-175]
 gi|46881240|gb|AAT04536.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|225876805|emb|CAS05514.1| Putative amino acid (glutamine) ABC transporter, permease protein
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|328473974|gb|EGF44790.1| hypothetical protein LM220_02221 [Listeria monocytogenes 220]
          Length = 213

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|238794644|ref|ZP_04638250.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia intermedia ATCC 29909]
 gi|238726033|gb|EEQ17581.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia intermedia ATCC 29909]
          Length = 369

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 54/76 (71%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+PRGQ EAA +LGL + K   LV+LPQA++ +IP L +  + L 
Sbjct: 243 FQSAYVAEVVRGGLQALPRGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALF 302

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 303 KDTSLVIIIGLFDLFS 318


>gi|291279626|ref|YP_003496461.1| polar amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754328|dbj|BAI80705.1| polar amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 258

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 66/110 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IA+S +  A+  EI+R+G+  V  GQ EA+ +LGL   K    ++LPQA++++I 
Sbjct: 128 FWSAIIAVSMFEGAYACEIIRAGIENVDTGQWEASYSLGLNTFKTFIYIILPQAIKTVIY 187

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           PLT+ +++L+K+S+L   +   DL       I++T    EI +I  F YL
Sbjct: 188 PLTNIFVSLIKDSALVSVIAIYDLTMEAQKAISETFMTFEIWIIVAFTYL 237


>gi|153801948|ref|ZP_01956534.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|153827918|ref|ZP_01980585.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|229522565|ref|ZP_04411981.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229526416|ref|ZP_04415820.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|124122523|gb|EAY41266.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|148876763|gb|EDL74898.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|229336574|gb|EEO01592.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229340550|gb|EEO05556.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|327486004|gb|AEA80410.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 298

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLSLSMLFKQVERR 291


>gi|219854226|ref|YP_002471348.1| hypothetical protein CKR_0883 [Clostridium kluyveri NBRC 12016]
 gi|219567950|dbj|BAH05934.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 219

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 30/220 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           +T++      +   +LGI L+L         R+    +    +  PLL    F  +GLP 
Sbjct: 22  MTIELTVITLILGTILGIFLALLKLSKNMVLRIISSIYTWVFRGTPLLLQLFFFYYGLP- 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            V I LK    F   VLG                  +AL+C   A++AEI+R G+ ++ +
Sbjct: 81  FVGIELK---PFSAAVLG------------------LALNC--GAYMAEIIRGGIQSIHK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALG ++ +  R ++LPQ  + IIPP+ ++++ +LK++SL   +   +L+    
Sbjct: 118 GQFEAAKALGFSYGETMRRIILPQTWKVIIPPVGNEFIAILKDTSLVSTIAMVELMRSAQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I   +   I +      +YL ++ M     +    K+A+
Sbjct: 178 QIYASSFDPISVFFTAAVLYLIMTTMFTTVFSAFEKKLAV 217


>gi|207739614|ref|YP_002258007.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|206592994|emb|CAQ59900.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 239

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 56/85 (65%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++    ++ Y  AF +E +R+G+ AVP GQ+ AA++LG T R A   ++LPQA+R   
Sbjct: 95  EFLATAFGIALYAGAFCSEELRAGIRAVPHGQLNAALSLGFTPRAAFVRIVLPQALRVAA 154

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
            PL  Q  N LKN+SLA+ +G A+L
Sbjct: 155 LPLLGQCANTLKNTSLAMGIGLAEL 179


>gi|220932712|ref|YP_002509620.1| polar amino acid ABC transporter, inner membrane subunit
           [Halothermothrix orenii H 168]
 gi|219994022|gb|ACL70625.1| polar amino acid ABC transporter, inner membrane subunit
           [Halothermothrix orenii H 168]
          Length = 216

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 108/201 (53%), Gaps = 34/201 (16%)

Query: 191 VFSFVLGIVLSL----------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           + S +LG+++++          FA +     +E+  +++PL+ I   + +GLP + +   
Sbjct: 20  ILSLILGLIVAVPLAFGQIYGNFAIKFLVSIYERVVRSIPLIVILFLVHYGLPRVGI--- 76

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
             +L F                   F++  + L   +AA+ ++I R  + ++  GQM+AA
Sbjct: 77  --RLTF-------------------FVASVVGLGLRSAAYQSQIFRGAIQSIDNGQMKAA 115

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++LG++  +A   V+LPQA+R II P T+++  +LK+SSLA A+G  +L+  G  II+ +
Sbjct: 116 LSLGMSKLQAFVTVILPQAIRLIIGPWTNEFTIVLKDSSLAYALGVVELLRQGRYIISTS 175

Query: 361 GQAIEIILIWMFIYLSLSIMI 381
            + + + L    IY  L+I++
Sbjct: 176 NKPMPVFLTVAAIYFILTIIV 196


>gi|83746651|ref|ZP_00943700.1| Hypothetical Protein RRSL_03561 [Ralstonia solanacearum UW551]
 gi|83726604|gb|EAP73733.1| Hypothetical Protein RRSL_03561 [Ralstonia solanacearum UW551]
          Length = 258

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 56/85 (65%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++    ++ Y  AF +E +R+G+ AVP GQ+ AA++LG T R A   ++LPQA+R   
Sbjct: 114 EFLATAFGIALYAGAFCSEELRAGIRAVPHGQLNAALSLGFTPRAAFVRIVLPQALRVAA 173

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
            PL  Q  N LKN+SLA+ +G A+L
Sbjct: 174 LPLLGQCANTLKNTSLAMGIGLAEL 198


>gi|302546543|ref|ZP_07298885.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302464161|gb|EFL27254.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces himastatinicus ATCC 53653]
          Length = 305

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-------LIALKYQLH 245
            F LGIVL+    RLSR       K++   YI  F    +P +V       L  L  +L 
Sbjct: 100 GFALGIVLAFM--RLSR---SPFLKSVAFTYIWAFR--SIPLIVQLLFWFNLTYLYKKLD 152

Query: 246 FDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           F  P   G F+F     V     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG
Sbjct: 153 FGIPFGPGFFSFDTAGLVG-AMSAAVLGLALHQAAYAAEIVRGGVLAVDTGQLEAAAALG 211

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      I  + G+ +
Sbjct: 212 IPRLRQLRRIVLPQAMRSILPNAANEVISLFKGTSIVSVMAIGELFYQTQVIYGRNGRVV 271

Query: 365 EIILIWMFIYLSLSIMIAL 383
            ++++    Y+ L+ ++++
Sbjct: 272 PLLMVATVWYIILTTLLSI 290


>gi|298530983|ref|ZP_07018384.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509006|gb|EFI32911.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 218

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 77/124 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    A+IAEIVR  ++++ +G ++A +ALGL+  + TR ++ P A R +IPPL +Q
Sbjct: 94  LVLAINAGAYIAEIVRGAVLSINKGYVDAGLALGLSRFQVTRYIVGPLAFRRMIPPLGNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK++SL + +G  +L   G  I+  + +A+E+      IYL L+ ++AL +  L  
Sbjct: 154 FIIGLKDTSLFIVIGVGELTRQGQEIMASSFRALEVWTAVAIIYLVLTTVLALSLRWLER 213

Query: 391 KIAL 394
           ++ +
Sbjct: 214 RMKI 217


>gi|323127407|gb|ADX24704.1| cystine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 216

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|312866273|ref|ZP_07726492.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098246|gb|EFQ56471.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 263

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 66/115 (57%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           +YIA S    A+  EI+RS +  VPR Q +AA ++G+   +  R  +LPQA++ +IP + 
Sbjct: 98  MYIAYSLNAGAYFGEIIRSAIANVPRHQFDAAYSIGMDKVQTYRYYILPQAVKEMIPNIE 157

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
              ++LL+NSSLA  +G  D++     +   T   IE  +    I++ LS++I L
Sbjct: 158 LSIVSLLQNSSLATYLGIYDIMGKAQLVGTNTAHQIEAFIDASIIFIVLSVVIHL 212


>gi|254820303|ref|ZP_05225304.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium intracellulare ATCC 13950]
          Length = 605

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 5/146 (3%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG    +GG T +  +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG ++  A
Sbjct: 436 LGVGPIVGGLTNNNPYPIGVAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYPVA 495

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEI 366
            RLV++PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  QTG    +
Sbjct: 496 MRLVVVPQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAQTGNLSPL 555

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +    F YL L++ +   +N ++A++
Sbjct: 556 VAAGAF-YLILTVPLTHLVNYIDARL 580


>gi|163804164|ref|ZP_02197929.1| putative amino acid ABC transporter, permease protein [Vibrio sp.
           AND4]
 gi|159172018|gb|EDP56997.1| putative amino acid ABC transporter, permease protein [Vibrio sp.
           AND4]
          Length = 181

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 83/148 (56%), Gaps = 29/148 (19%)

Query: 191 VFSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F+  +G++++L A   S         + +  +++P+L +  ++ +G+PTL+ ++L +  
Sbjct: 57  LFAMTIGLIIALPALSDSPALKWINRIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-- 114

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LG
Sbjct: 115 ---------------------FWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLG 153

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L + +  RLV+LPQA+R I+PPL +Q++
Sbjct: 154 LNYWQKMRLVILPQALRQILPPLGNQFV 181



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 43/70 (61%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF +T  ++   M+ A  IG ++    LS +  + WI R+YVEV R+IP LV++ ++
Sbjct: 41  LLAGFNDTIQVSLLSMLFAMTIGLIIALPALSDSPALKWINRIYVEVIRSIPVLVLLLWV 100

Query: 149 YKSVLSVLPI 158
           Y  + ++L +
Sbjct: 101 YYGMPTLLDV 110


>gi|24379378|ref|NP_721333.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|24377307|gb|AAN58639.1|AE014934_3 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
          Length = 230

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 69/108 (63%), Gaps = 2/108 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA I+E+ +S  +AVP+GQ+EA +++GLT  +  R +LLPQ  +  +P +T+  LNL+K+
Sbjct: 109 AASISEVFKSAYLAVPKGQLEAGLSIGLTGFQTFRRILLPQTFQIALPNITTAILNLMKD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIAL 383
           ++LA  +G  D++  G  II  N    ++E      FIY  ++++++L
Sbjct: 169 AALAYTIGLVDVMGAGNLIISRNLGNYSLETYTAVAFIYWGIALVLSL 216


>gi|296269106|ref|YP_003651738.1| polar amino acid ABC transporter inner membrane subunit
           [Thermobispora bispora DSM 43833]
 gi|296091893|gb|ADG87845.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobispora bispora DSM 43833]
          Length = 223

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 52/70 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS YTAAF+ E++RSG+  VP GQ EAA +LGLT  +  RLV+LPQAMR+++ PL + 
Sbjct: 97  LGLSAYTAAFVCEVIRSGINTVPLGQAEAARSLGLTFPQTLRLVILPQAMRAVVAPLGTL 156

Query: 331 YLNLLKNSSL 340
              L+KN+++
Sbjct: 157 LNALIKNTTV 166


>gi|262164526|ref|ZP_06032264.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262026906|gb|EEY45573.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 298

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 75/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   EI +I    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWIIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLTLSMLFKQVEKR 291


>gi|116873173|ref|YP_849954.1| amino acid ABC transporter, permease protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742051|emb|CAK21175.1| amino acid ABC transporter, permease protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 213

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|59800817|ref|YP_207529.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|194098108|ref|YP_002001156.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae NCCP11945]
 gi|239998564|ref|ZP_04718488.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 35/02]
 gi|240013689|ref|ZP_04720602.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae DGI18]
 gi|240016129|ref|ZP_04722669.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae FA6140]
 gi|240080271|ref|ZP_04724814.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae FA19]
 gi|240112483|ref|ZP_04726973.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae MS11]
 gi|240115223|ref|ZP_04729285.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID18]
 gi|240120758|ref|ZP_04733720.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID24-1]
 gi|240123064|ref|ZP_04736020.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID332]
 gi|240125316|ref|ZP_04738202.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-92-679]
 gi|240127768|ref|ZP_04740429.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-93-1035]
 gi|254493285|ref|ZP_05106456.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 1291]
 gi|260440959|ref|ZP_05794775.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae DGI2]
 gi|268594423|ref|ZP_06128590.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 35/02]
 gi|268596420|ref|ZP_06130587.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae FA19]
 gi|268598550|ref|ZP_06132717.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae MS11]
 gi|268600903|ref|ZP_06135070.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID18]
 gi|268681690|ref|ZP_06148552.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID332]
 gi|268683917|ref|ZP_06150779.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-92-679]
 gi|268686160|ref|ZP_06153022.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-93-1035]
 gi|291044287|ref|ZP_06569996.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae DGI2]
 gi|293399479|ref|ZP_06643632.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|59717712|gb|AAW89117.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|193933398|gb|ACF29222.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae NCCP11945]
 gi|226512325|gb|EEH61670.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 1291]
 gi|268547812|gb|EEZ43230.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 35/02]
 gi|268550208|gb|EEZ45227.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae FA19]
 gi|268582681|gb|EEZ47357.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae MS11]
 gi|268585034|gb|EEZ49710.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID18]
 gi|268621974|gb|EEZ54374.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID332]
 gi|268624201|gb|EEZ56601.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-92-679]
 gi|268626444|gb|EEZ58844.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-93-1035]
 gi|291011181|gb|EFE03177.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae DGI2]
 gi|291610048|gb|EFF39170.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|317163839|gb|ADV07380.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 238

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|299066291|emb|CBJ37475.1| putative amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 217

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           Q+  + P+L Q    F G S    E   + +  I L+ YT+A++AE+ R  + A+PRGQ 
Sbjct: 59  QIFQNTPLLMQMFLVFFGASMAGLEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQW 118

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA+ +L + + +  R V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + 
Sbjct: 119 EASASLAMGYFQQMRHVVLPQAVRMSIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSVLA 178

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           N T Q   I  +    YL+L   ++L  + L  K+
Sbjct: 179 NATFQPFLIYGLVGMAYLALCWPLSLCASHLEKKL 213


>gi|227325924|ref|ZP_03829948.1| glutamine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 219

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+     R V+ P A+R ++P
Sbjct: 90  FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLILSFIL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRLKI 218


>gi|220903865|ref|YP_002479177.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219868164|gb|ACL48499.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 266

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 21/207 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI V S    + L L  T L R  + +    +   Y+   +I G+P LV      Q+ + 
Sbjct: 71  KITVLSICCAVPLGLL-TGLGRISNNRLINLIASTYVE--VIRGIPLLV------QIFYI 121

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALS-CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              L +F  + G T      S  +A+S CY  A++ E+ R+G+ A+ +GQ EAA +LG  
Sbjct: 122 YYALSRFVQVSGVT------SAVVAISFCY-GAYMGEVFRAGITAINKGQSEAARSLGFN 174

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE- 365
             +  R V+LPQAMR+I+PP+ ++ + +LK++SL   +   D++    + +  T    E 
Sbjct: 175 GFQTMRYVVLPQAMRTILPPVGNECIAMLKDTSLVSIMAVPDIMQRARSFVGTTYLYFET 234

Query: 366 ---IILIWMFIYLSLSIMIALFMNRLN 389
              + L+++ I L LS  +++   RLN
Sbjct: 235 YTVVALLYLVITLILSKTVSIMEARLN 261



 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + TF +    +  A  +G L G GR+S N+L+  I   YVEV R IP LV IF++Y
Sbjct: 65  GVLITFKITVLSICCAVPLGLLTGLGRISNNRLINLIASTYVEVIRGIPLLVQIFYIY 122


>gi|50914070|ref|YP_060042.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
 gi|50903144|gb|AAT86859.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
          Length = 216

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|28900674|ref|NP_800329.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365548|ref|ZP_05778085.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260877612|ref|ZP_05889967.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260895967|ref|ZP_05904463.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260901648|ref|ZP_05910043.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28809054|dbj|BAC62162.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308085232|gb|EFO34927.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090515|gb|EFO40210.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308108923|gb|EFO46463.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308114385|gb|EFO51925.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
          Length = 306

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L L  L    + +   L  F F G S +     S  + +   ++A+IAE+VR+GL +
Sbjct: 142 IPLLGLEDLLRNYNGEPNALQSFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRAGLQS 200

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+   +   ++  
Sbjct: 201 IDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTF 260

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  + N +G   EI LI  F Y  +   ++L    +  K
Sbjct: 261 VGTEMANSSGYIFEIWLIVGFSYFLICFGLSLIFRYIEKK 300


>gi|296119654|ref|ZP_06838212.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Corynebacterium ammoniagenes DSM 20306]
 gi|295967537|gb|EFG80804.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Corynebacterium ammoniagenes DSM 20306]
          Length = 305

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 1/81 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ + L    AA++AEIVRSG+ +VP GQ EA+ ALG+      R  ++PQAMR IIP
Sbjct: 142 FLSV-VGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVMPQAMRIIIP 200

Query: 326 PLTSQYLNLLKNSSLAVAVGF 346
           P  +++++LLK SSL VA+ +
Sbjct: 201 PTGNEFISLLKTSSLVVAIPY 221


>gi|153953604|ref|YP_001394369.1| amino acid ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146346485|gb|EDK33021.1| Amino acid ABC transporter, permease protein [Clostridium kluyveri
           DSM 555]
          Length = 216

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 30/220 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           +T++      +   +LGI L+L         R+    +    +  PLL    F  +GLP 
Sbjct: 19  MTIELTVITLILGTILGIFLALLKLSKNMVLRIISSIYTWVFRGTPLLLQLFFFYYGLP- 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            V I LK    F   VLG                  +AL+C   A++AEI+R G+ ++ +
Sbjct: 78  FVGIELK---PFSAAVLG------------------LALNC--GAYMAEIIRGGIQSIHK 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALG ++ +  R ++LPQ  + IIPP+ ++++ +LK++SL   +   +L+    
Sbjct: 115 GQFEAAKALGFSYGETMRRIILPQTWKVIIPPVGNEFIAILKDTSLVSTIAMVELMRSAQ 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I   +   I +      +YL ++ M     +    K+A+
Sbjct: 175 QIYASSFDPISVFFTAAVLYLIMTTMFTTVFSAFEKKLAV 214


>gi|150377913|ref|YP_001314508.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150032460|gb|ABR64575.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 502

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 17/181 (9%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFI 281
           I T +  GLP +V I L          +GQ F  IG     P    L I ALS    A+I
Sbjct: 67  IYTDIFRGLPAIVTILL----------IGQGFARIGRELFGPSPYPLGILALSLIAGAYI 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI RSG+ +V RGQMEA  AL +++ +  RL+++PQ +R ++P L +Q++  +K+SSL 
Sbjct: 117 GEIFRSGIQSVDRGQMEACRALSMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSSLV 176

Query: 342 VAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G      ++  VG      TG    ++L  +F YL +++ +   +N +++++ L ++
Sbjct: 177 YFLGLLASEREIFRVGQDQAVVTGNLSPLLLAGVF-YLVVTVPLTHVVNAIDSRLRLGKQ 235

Query: 398 K 398
           +
Sbjct: 236 R 236


>gi|87124566|ref|ZP_01080415.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Synechococcus sp. RS9917]
 gi|86168138|gb|EAQ69396.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Synechococcus sp. RS9917]
          Length = 345

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 76/125 (60%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A + + +A++AE VR GL ++P  Q EAA ALGL+  ++ +LV+LPQA++  IP LT+Q
Sbjct: 212 LAFALFASAYVAEDVRGGLQSIPSTQKEAAAALGLSAWQSLQLVVLPQALQIAIPALTNQ 271

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387
            + LL+N+SL   +G  +L+ +  +++      G+ +E+ +    +Y  L   +AL   R
Sbjct: 272 AIGLLQNTSLMALLGLVELLGISRSLLANPAFIGRHLEVYVWLASLYWLLCTAMALLARR 331

Query: 388 LNAKI 392
           L   +
Sbjct: 332 LERSV 336


>gi|116513461|ref|YP_812367.1| ABC-type amino acid transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092776|gb|ABJ57929.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 247

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 105/199 (52%), Gaps = 9/199 (4%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+LG+V++L  T L R   +K G  L +  I  F ++   +  L+   + ++F  P 
Sbjct: 37  IISFILGLVIAL-VTALVR-ISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVYFGLPY 94

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L     +        F +  I  S  T A+ +E +R+ + +VPR Q EAA ++G+   K 
Sbjct: 95  LKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIGMNRGKT 154

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA++  IPPL++ ++ L+K++SLA ++   ++  V   I  +  Q        
Sbjct: 155 LRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQP------- 207

Query: 371 MFIYLSLSIMIALFMNRLN 389
           + +Y  ++++ ALF + L+
Sbjct: 208 LIMYSLVALVYALFCSVLS 226


>gi|296101734|ref|YP_003611880.1| cystine transport system permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295056193|gb|ADF60931.1| cystine transport system permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 222

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLVLGFVLALM--RMSPVWPVRW---LARFYISVFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERD 220



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ VFR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPVWPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107


>gi|169796220|ref|YP_001714013.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|184157851|ref|YP_001846190.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|213157046|ref|YP_002319091.1| glutamate/aspartate transport system permease protein GltJ
           [Acinetobacter baumannii AB0057]
 gi|215483675|ref|YP_002325896.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|239502272|ref|ZP_04661582.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB900]
 gi|294838745|ref|ZP_06783428.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013113]
 gi|294841310|ref|ZP_06785993.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6014059]
 gi|294859045|ref|ZP_06796814.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013150]
 gi|301347721|ref|ZP_07228462.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB056]
 gi|301596774|ref|ZP_07241782.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB059]
 gi|169149147|emb|CAM87026.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|183209445|gb|ACC56843.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|193077141|gb|ABO11919.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
 gi|213056206|gb|ACJ41108.1| glutamate/aspartate transport system permease protein GltJ
           [Acinetobacter baumannii AB0057]
 gi|213989092|gb|ACJ59391.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|322508166|gb|ADX03620.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii 1656-2]
 gi|323517740|gb|ADX92121.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 280

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 74/123 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E VR+G+  V RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 150 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKR 269

Query: 392 IAL 394
           +A+
Sbjct: 270 MAV 272



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 14/99 (14%)

Query: 63  FLSERAGFEIDQG--------IVPYTSDSSYATA------ILVGFVNTFWLAFSGMIPAT 108
           F +E   + +D+         ++  +S ++YA A      +  G     W A    + A 
Sbjct: 11  FCAESNEYGVDKAAWAESVCKVIGSSSYNAYAEAPTWLQMLGSGVFTMVWTAIVAFLIAF 70

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           ++G+L+G  R   NK +A+I   YVE+FRNIP +V +FF
Sbjct: 71  LLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109


>gi|134098325|ref|YP_001103986.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338]
 gi|291004255|ref|ZP_06562228.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338]
 gi|133910948|emb|CAM01061.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338]
          Length = 291

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 112/210 (53%), Gaps = 25/210 (11%)

Query: 191 VFSFVLGIVLSL-----FA-TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V +F  G VL+L     FA  RLS H   +    +P   I  F    +P ++LI   + L
Sbjct: 70  VGAFATGAVLALAFGAVFALGRLSDHAWLR----VPCAGIVEFF-RAIPLVILI---FFL 121

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  P LG  NF        ++ S+ + L+ Y  + +AE+ R+G+ A+PRGQ EAA ++G
Sbjct: 122 YYAAPGLG-VNF-------GQYWSVVLGLTLYNGSVLAEVFRAGVNALPRGQTEAAYSIG 173

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG---GTIINQTG 361
           +   +  R V+LPQ++R ++P + SQ + LLK+S+L   + + +L+      G +     
Sbjct: 174 MRKNQVMRFVVLPQSVRMMLPAIISQLVVLLKDSALGFLITYQELLYYARYLGGVPTLDR 233

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + ++   +Y+S+ +++  F N L+ +
Sbjct: 234 PIIPVSMVVAALYISMCLLLTWFANFLDRR 263


>gi|146311432|ref|YP_001176506.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter sp. 638]
 gi|145318308|gb|ABP60455.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Enterobacter sp. 638]
          Length = 228

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 19/180 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TL M   A   V +   GIVL+  A R         G    +LY+   +I G+P   LI 
Sbjct: 31  TLLMALGAA--VLALPAGIVLASLAWRFP-------GMVRKVLYVWAEVIRGIP---LIF 78

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + + + +  P+L   +  G  TV+       +AL+ +TAA +   V +GL A+P GQ EA
Sbjct: 79  VIFWMWYLLPLLTGGDLPGAVTVT-------LALAWFTAAAVMHSVLAGLRALPTGQYEA 131

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+  G   ++   L+LLPQ +R+I+P L   +++LLK++SLA  V   +L +V G + N+
Sbjct: 132 ALTQGFGTQQTLWLILLPQVLRTILPSLLGIFISLLKDTSLAFIVNVPELTTVAGQVNNR 191


>gi|121604974|ref|YP_982303.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593943|gb|ABM37382.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 110/220 (50%), Gaps = 14/220 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FLN   L F    +     + V +F+ G +L  FA  L R +  +  +    LYI   LI
Sbjct: 3   FLNLAHLKFLFDGLLWTVGLSVLAFIGGGLLG-FAVALGRLYGWRATRTAVSLYIK--LI 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            GLP LVL+ L Y   F  P LG         VSP   +  +ALS Y +A++ EI R  +
Sbjct: 60  QGLPLLVLLPLAY---FGLPSLG-------INVSPL-AAAALALSIYVSAYLGEIWRGCI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +VPR Q EAA  LGL   +    V+LPQA++   PP     + ++KN+SLA A+GF +L
Sbjct: 109 ESVPRTQFEAAECLGLRWHQQLLHVILPQAVKIATPPTVGFMVQIVKNTSLASAIGFVEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
              G  I N T +   I +I   +Y +L   ++L   RL 
Sbjct: 169 ARAGQIINNSTFEPFVIFVIVAALYFALCYPLSLLSRRLE 208


>gi|311898731|dbj|BAJ31139.1| putative glutamate ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 77/133 (57%), Gaps = 2/133 (1%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +   ALS YT +FI E++R+G+  VP GQ EAA +LG+   +   LV+LPQA R++I
Sbjct: 85  SFTAAVAALSVYTGSFICEVLRAGINTVPLGQAEAARSLGMGFGQTLFLVVLPQAGRAVI 144

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIAL 383
            PL S ++ L +NS++A A    +L SV  T    +   I +   W+ + YL++   I+ 
Sbjct: 145 APLGSVFIALPRNSAVAGAFNVFELFSVQKTWTEDSAP-IFVSFFWLALAYLAIGFAISS 203

Query: 384 FMNRLNAKIALKE 396
            ++ L  ++A+  
Sbjct: 204 VLSLLERRVAVAR 216


>gi|304440010|ref|ZP_07399903.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371502|gb|EFM25115.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 556

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 17/201 (8%)

Query: 191 VFSFVLGIVLSLFAT-----RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           V   VLG+++ +  T     +  ++F     K L  +Y+   ++ G P +V   L Y   
Sbjct: 343 VLGLVLGLIVGIIRTIPESLKKGKNFVLNIFKVLANIYVQ--VLRGTPMIVQSVLVY--- 397

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                 G   F  G  +SP   + ++ +S  T A+++E+VR G+ ++ +GQ EAA +LG+
Sbjct: 398 -----FGLLQF-AGINLSP-MQAAFLVVSVNTGAYLSEVVRGGINSIDKGQFEAARSLGM 450

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            H +    V+LPQA+++IIP + ++++  +K++S+   +   +L     +I+       E
Sbjct: 451 NHYQTMVHVVLPQAIKNIIPAIGNEFIVNIKDTSVLNVIAVNELFFTTKSIVGGNLMYFE 510

Query: 366 IILIWMFIYLSLSIMIALFMN 386
             LI   IYL+L++ IA F++
Sbjct: 511 TYLITSIIYLTLTLSIAYFLH 531


>gi|311112079|ref|YP_003983301.1| amino acid ABC transporter permease [Rothia dentocariosa ATCC
           17931]
 gi|310943573|gb|ADP39867.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Rothia dentocariosa ATCC 17931]
          Length = 267

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 77/128 (60%), Gaps = 8/128 (6%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L   ++A+I+E++R+GL AVP+GQ EAA +LG++H +A   V++PQA R ++PPLT++
Sbjct: 137 LSLGLVSSAYISEVLRAGLQAVPKGQYEAARSLGMSHTRAMLSVIIPQAFRIVLPPLTNE 196

Query: 331 YLNLLKNSS----LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIA 382
            + L K+SS    L V +   +L   G   I  +G  +  +++    YL +++    + A
Sbjct: 197 VILLTKDSSLVYLLGVQIAQYELAKFGREGITASGAGLTPLVVAGLCYLIITVPLGQLSA 256

Query: 383 LFMNRLNA 390
            F  R  A
Sbjct: 257 YFEKRTGA 264


>gi|260550663|ref|ZP_05824872.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
 gi|260406374|gb|EEW99857.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
          Length = 280

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 74/123 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E VR+G+  V RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 150 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFVMAWIEKR 269

Query: 392 IAL 394
           +A+
Sbjct: 270 MAV 272



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   ++   +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FRN
Sbjct: 41  YSEAPTWLQMLGSGVFTMVWTAVVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRN 100

Query: 139 IPPLVVIFF 147
           IP +V +FF
Sbjct: 101 IPLIVQLFF 109


>gi|217964113|ref|YP_002349791.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes HCC23]
 gi|254832443|ref|ZP_05237098.1| hypothetical protein Lmon1_13894 [Listeria monocytogenes 10403S]
 gi|290893397|ref|ZP_06556382.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|217333383|gb|ACK39177.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes HCC23]
 gi|290557048|gb|EFD90577.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|307571320|emb|CAR84499.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes L99]
          Length = 213

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|168462510|ref|ZP_02696441.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|195633964|gb|EDX52316.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
          Length = 222

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLWLVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +EK+
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQEKE 220



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S   LV W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWLVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|268592304|ref|ZP_06126525.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Providencia rettgeri DSM 1131]
 gi|291312085|gb|EFE52538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Providencia rettgeri DSM 1131]
          Length = 250

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 80/135 (59%), Gaps = 1/135 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  AL+  T+A++A  V++G++A+  GQ +A ++LG +  +    V+LPQA+R +
Sbjct: 94  PGIATVVCALALITSAYLAHAVKAGILAIGAGQWQAGLSLGFSRWQVLWNVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG A+L  +   + N +    +E+ L   FIY  +   + 
Sbjct: 154 VPSFINQWVALIKDTSLAYVVGVAELSFLATQVNNREMVYPLEVFLFVAFIYFVMCFAVE 213

Query: 383 LFMNRLNAKIALKEK 397
           +  NR+  K++ + +
Sbjct: 214 IIANRVATKLSAQHQ 228


>gi|149926672|ref|ZP_01914932.1| polar amino acid ABC transporter, inner membrane subunit
           [Limnobacter sp. MED105]
 gi|149824601|gb|EDM83817.1| polar amino acid ABC transporter, inner membrane subunit
           [Limnobacter sp. MED105]
          Length = 228

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 91/175 (52%), Gaps = 15/175 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PL+ +    IF    LV + L+  + +++P            + P+  S YI    +
Sbjct: 64  RSIPLILV----IFWFYFLVPVVLQSVMGYERP----------PQIGPD-RSAYITFIMF 108

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AAF  EI+R+G+ ++P+GQ+ AA ALGL +R     ++LPQA R+++P L +Q + L +
Sbjct: 109 EAAFFCEIMRAGIQSIPKGQVAAAQALGLNYRLTMAKIVLPQAFRNMLPVLLTQTIILFQ 168

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +   D +     I  +    +E+      +YL++   +++ +  L  K
Sbjct: 169 DTSLVYVLSVTDFLGAASKIAQRDSALVEMYTFVALVYLAICFSMSMLVKALQKK 223


>gi|327193169|gb|EGE60078.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           etli CNPAF512]
          Length = 324

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI RSG+ ++ RGQ EA+ ++G       R ++LPQA+  IIPP  +Q
Sbjct: 197 LALSLCYGAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQ 256

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++++LK+SSL   +G  +L+ +  T+  +T Q +E+++    +Y  +SI + L   R+  
Sbjct: 257 FISMLKDSSLVSVIGVWELMFLARTLGQKTFQHMEMLISAAMLYWIMSIGLELIQARIER 316

Query: 391 KIALKEKK 398
             A  + +
Sbjct: 317 HYARSKVR 324


>gi|323464072|gb|ADX76225.1| glutamine-binding periplasmic protein [Staphylococcus
           pseudintermedius ED99]
          Length = 486

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 81/131 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   IAL    +A+IAEI+R+G+ AV +GQMEAA +LGL++ +  + V++PQA++ I+P
Sbjct: 356 FICGAIALVINCSAYIAEIIRAGINAVDKGQMEAARSLGLSYSQTIKSVIMPQAIKKILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++++ ++K SS+   +G ++++     +   +      +LI   +Y  L+  ++  M
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTPLLIAAVLYFILTFTLSRLM 475

Query: 386 NRLNAKIALKE 396
           + L  ++++ +
Sbjct: 476 SFLEGRMSISD 486


>gi|301512791|ref|ZP_07238028.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB058]
          Length = 280

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 74/123 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E VR+G+  V RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 150 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKR 269

Query: 392 IAL 394
           +A+
Sbjct: 270 MAV 272



 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 14/109 (12%)

Query: 63  FLSERAGFEIDQG--------IVPYTSDSSYATA------ILVGFVNTFWLAFSGMIPAT 108
           F +E   + +D+         ++  +S ++YA A      +  G     W A    + A 
Sbjct: 11  FCAESNEYGVDKAAWAESVCKVIGSSSYNAYAEAPTWLQMLGSGVFTMVWTAIVAFLIAF 70

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++G+L+G  R   NK +A+I   YVE+FRNIP +V +FF     L  LP
Sbjct: 71  LLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFLEFLP 119


>gi|288959645|ref|YP_003449986.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288911953|dbj|BAI73442.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 229

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 13/195 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ + S  LG +++ FA  L R    +  + L   Y+  F   G P LV I L Y   F 
Sbjct: 22  QLIIASLALGALVA-FAVALLRLSGNRLVEGLAGAYV--FFFRGTPLLVQIFLIY---FG 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              LGQF+ I  S + P     Y    +AL+  T A+ +E++R  +++VP+GQ+EAA A 
Sbjct: 76  ---LGQFDLIKNSILWPFLREPYWCAILALTLNTGAYTSEVLRGAILSVPQGQVEAARAC 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A R ++LP A+R ++P   ++ + ++K +SLA  +   ++  +   +I QT   
Sbjct: 133 GMSRALAFRRIVLPVAIRQMLPAYGNEVILMVKATSLASTITLMEVTGIARRMIAQTFAV 192

Query: 364 IEIILIWMFIYLSLS 378
            E+ ++   IYL L+
Sbjct: 193 FELFIVAGAIYLVLN 207


>gi|256844625|ref|ZP_05550110.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           125-2-CHN]
 gi|262047083|ref|ZP_06020042.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           MV-3A-US]
 gi|295692449|ref|YP_003601059.1| glutamine ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|312984303|ref|ZP_07791647.1| glutamine ABC transporter (membrane protein) [Lactobacillus
           crispatus CTV-05]
 gi|256613166|gb|EEU18370.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           125-2-CHN]
 gi|260572660|gb|EEX29221.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           MV-3A-US]
 gi|295030555|emb|CBL50034.1| Glutamine ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|310894321|gb|EFQ43399.1| glutamine ABC transporter (membrane protein) [Lactobacillus
           crispatus CTV-05]
          Length = 217

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  +  A +AEIVRSG+ +V  GQME A + G++
Sbjct: 83  ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDSGQMEGARSNGMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+ ++IP L SQ+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YGQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   ++   N L  K
Sbjct: 190 MYVIIAIMYFIVCFCLSTIANYLQKK 215


>gi|330945316|gb|EGH46938.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 252

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 122 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 181

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 182 FIALFKDTSLVIIIGLFDLLN 202


>gi|307308379|ref|ZP_07588084.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306901180|gb|EFN31787.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 95/191 (49%), Gaps = 17/191 (8%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A  L R  +    + L   YI  F   G P LV + + Y   F  P+LG    I      
Sbjct: 37  AVALGRTSNWAWMRGLMATYIQIFQ--GTPLLVQLFIVY---FGLPLLGLKVDI------ 85

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             +M+L + LS +T+AF+ EI R  + AVP GQ EAA ALG+ +      V+LPQA R  
Sbjct: 86  --WMALTVGLSLHTSAFLGEIWRGSIQAVPPGQSEAARALGIGYVHRMIDVVLPQAFRIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379
           +P      +NL+K ++LA  +G  +L   G  + N T Q ++    + L++ FI L L+ 
Sbjct: 144 LPATIGFLVNLIKGTALAALLGLTELTRSGQLMANITFQPLQAYGAVGLVYFFICLPLTT 203

Query: 380 MIALFMNRLNA 390
             A    RLNA
Sbjct: 204 FSARIERRLNA 214


>gi|293381613|ref|ZP_06627597.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|290921797|gb|EFD98815.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
          Length = 217

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  +  A +AEIVRSG+ +V  GQME A + G++
Sbjct: 83  ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDSGQMEGARSNGMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+ ++IP L SQ+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YVQAMYHVIMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   ++   N L  K
Sbjct: 190 MYVIIAIMYFIVCFCLSTIANYLQKK 215


>gi|256375588|ref|YP_003099248.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255919891|gb|ACU35402.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 290

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 43/212 (20%)

Query: 202 LFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           L A RLS H        F  +  +A+PLL +     FGLPT   I +K            
Sbjct: 87  LAAGRLSEHAFWRIPAGFLVEVFRAIPLLIMIFIFYFGLPT---IDIKMS---------- 133

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                      +F ++ + L+ Y  + +AE+ R+G+ ++PRGQ EAA ALG+   +    
Sbjct: 134 -----------QFTAVVLGLTLYNGSVLAEVFRAGVASLPRGQAEAAYALGMRKTQVMTQ 182

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILI 369
           VLLPQA+R+++P + SQ + LLK+++L   + + +L+     +  Q GQ     + + ++
Sbjct: 183 VLLPQALRAMLPAIISQLVVLLKDTALGFIINYKELLDYTKYLGTQ-GQFGRPLVPMTIV 241

Query: 370 WMFIYLSLSIMIALFM------NRLNAKIALK 395
              IY++L +++  F       NR + K  +K
Sbjct: 242 TGAIYVALCLLLTWFAVWLEKRNRRSKKTVVK 273


>gi|284802184|ref|YP_003414049.1| hypothetical protein LM5578_1940 [Listeria monocytogenes 08-5578]
 gi|284995326|ref|YP_003417094.1| hypothetical protein LM5923_1891 [Listeria monocytogenes 08-5923]
 gi|284057746|gb|ADB68687.1| hypothetical protein LM5578_1940 [Listeria monocytogenes 08-5578]
 gi|284060793|gb|ADB71732.1| hypothetical protein LM5923_1891 [Listeria monocytogenes 08-5923]
          Length = 221

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 94  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 154 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 212

Query: 388 LNAK 391
           L  +
Sbjct: 213 LEKR 216


>gi|38233733|ref|NP_939500.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129]
 gi|38199994|emb|CAE49663.1| Putative ABC transport system membrane protein [Corynebacterium
           diphtheriae]
          Length = 314

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 54/76 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA+++EIVRSG+ AVP GQ EA+ ALG++     R  +LPQAMR I+PP  ++
Sbjct: 146 VGLGLNEAAYMSEIVRSGIQAVPEGQTEASKALGMSWWMTIRRTVLPQAMRIIVPPTGNE 205

Query: 331 YLNLLKNSSLAVAVGF 346
           +++LLK +SL VA+ +
Sbjct: 206 FISLLKTTSLVVAIPY 221


>gi|322411105|gb|EFY02013.1| putative glutamine-binding periplasmic protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 522

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491


>gi|291458995|ref|ZP_06598385.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418249|gb|EFE91968.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 231

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 25/183 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLY- 270
           +ALP+    T + F L  L+ + +    +F  PVL QF     +F  G+ + P+   LY 
Sbjct: 15  RALPITLELTAVSFVLSLLLAVFIAVIDYFKVPVLRQFFALYVSFFRGTPLLPQLFLLYF 74

Query: 271 -------------------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                              I L+   AA++ E+VR  L++VP GQ EAA+A G++  +  
Sbjct: 75  GIPTFIKPLRSIPAIVICTIGLTLNAAAYMKEVVRGALLSVPEGQREAALAHGMSETRTM 134

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQA R  IP L +  ++++K SS+A  +G  ++ +      + T    E  +I M
Sbjct: 135 TRIVLPQAARVAIPSLFNNLVDIVKGSSMAFTIGVVEITAAANLRASVTFNYFEAYMILM 194

Query: 372 FIY 374
            +Y
Sbjct: 195 LVY 197


>gi|188590526|ref|YP_001920426.1| L-cystine transport system permease protein TcyB [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188500807|gb|ACD53943.1| L-cystine transport system permease protein TcyB [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 213

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 30/194 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      + S  LGIV++L  T       + TG      +  PLL     + FGLPT
Sbjct: 17  VTLEVFVLTLILSIPLGIVVALARTSKFLVLRKLTGIYVLIMRGTPLLLQIVVIFFGLPT 76

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +        + FD+                 F +  +A     AA+  EI R+G+I++ +
Sbjct: 77  M-------GITFDR-----------------FTAAILAFVLNYAAYFGEIFRAGIISIDK 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LGLT++     ++LPQA++ +IPP+ ++   L+K++SL   +G  +L+ +  
Sbjct: 113 GQYEAAEMLGLTYKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIAK 172

Query: 355 TIINQTGQAIEIIL 368
              N+    I +IL
Sbjct: 173 IASNRDVTLIPLIL 186


>gi|148273811|ref|YP_001223372.1| putative polar amino acid ABC transporterpermease [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831741|emb|CAN02710.1| putative polar amino acid ABC transporter,permease component
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 221

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 21/224 (9%)

Query: 177 SFPTLTMDT---NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           SF  L ++T      + + +F LG+ ++L    L R +  +    +   YIS  ++ G P
Sbjct: 11  SFGPLALETIRGTIPLALVTFALGLAIAL-GLALMRLYGNRLVSGIARFYIS--VVRGTP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +   + + +  P +G         V P + S  IALS     + AEI+R+ +++VP
Sbjct: 68  LLVQL---FVIFYGLPSIG--------VVLPPWPSAVIALSVNVGGYAAEIIRASILSVP 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA   +G++     R +++PQA R  +PPL++ +++L+K++SLA  +   +L    
Sbjct: 117 RGQWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKDTSLASVILVTELFKQA 176

Query: 354 GTIINQTGQ----AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I + T +     +E  LI+  + L LS        RL+  +A
Sbjct: 177 QLIASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRYVA 220


>gi|71737926|ref|YP_274852.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289627188|ref|ZP_06460142.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289648678|ref|ZP_06480021.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|71558479|gb|AAZ37690.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320324043|gb|EFW80126.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320329012|gb|EFW85011.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330868025|gb|EGH02734.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330985343|gb|EGH83446.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 220

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+P GQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|296110979|ref|YP_003621360.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832510|gb|ADG40391.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 219

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 25/178 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL I  F+ F LP       K  +H                  P F +  IA+S +
Sbjct: 66  RNLPLLLIIFFVYFALP-------KIGIHL-----------------PIFWATVIAMSTF 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A +AEIVR GL +V  GQ E A A GL++ +    ++LPQA + +IPP+ SQ ++L+K
Sbjct: 102 ESAMLAEIVRGGLESVDIGQFEGARANGLSNMQTMIYIILPQAYKRMIPPIISQLISLVK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLNAKIA 393
           ++SLA+ +  +++   G  +  Q    I  +LI +  +Y  L+  ++L     + K+A
Sbjct: 162 DTSLAMGIVLSEMTYRGQIVYAQNSTYIIPVLIAITLVYFLLNYGLSLIARWADHKLA 219


>gi|294084530|ref|YP_003551288.1| ABC transporter permease [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664103|gb|ADE39204.1| ABC transporter permease protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 224

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 72/127 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  +  +  + AF AEI R+G++++  GQ EAA A+G+ + +A R ++LPQA++ + P
Sbjct: 90  FLAAALTFTIQSGAFFAEIFRAGIVSIEHGQWEAAKAIGMRYNQAMRRIILPQAVKRMFP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +  + + L+K ++L   V +ADL+     +  +T + +E+  +   IY     + +   
Sbjct: 150 SMMERSIELMKTTTLVATVSYADLLFQANELAQKTFRPLEVFTVVALIYFVTISIFSFLA 209

Query: 386 NRLNAKI 392
           +R   ++
Sbjct: 210 SRFERRL 216



 Score = 43.1 bits (100), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +   +P  +++ +   +L GF NT  L  + +    ++G ++   RLS+ + V +   V 
Sbjct: 3   EWDFIPVLTETGF---LLAGFRNTLVLTATALSGGLVVGLVLAFARLSSRRWVRFPADVI 59

Query: 133 VEVFRNIPPLVVIFFLY 149
           +EVFR  PPLV +F+ +
Sbjct: 60  IEVFRTTPPLVQLFWFF 76


>gi|19745969|ref|NP_607105.1| putative ABC transporter (permease) [Streptococcus pyogenes
           MGAS8232]
 gi|19748129|gb|AAL97604.1| putative ABC transporter (permease) [Streptococcus pyogenes
           MGAS8232]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|50121693|ref|YP_050860.1| glutamine ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612219|emb|CAG75669.1| glutamine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 219

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+     R V+ P A+R ++P
Sbjct: 90  FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFIL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRLKI 218


>gi|330971239|gb|EGH71305.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 220

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y   ++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGTYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|260555282|ref|ZP_05827503.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC
           19606]
 gi|260411824|gb|EEX05121.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC
           19606]
          Length = 280

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 74/123 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E VR+G+  V RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 150 ALGLYTAARVSEHVRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKR 269

Query: 392 IAL 394
           +A+
Sbjct: 270 MAV 272



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 14/99 (14%)

Query: 63  FLSERAGFEIDQG--------IVPYTSDSSYATA------ILVGFVNTFWLAFSGMIPAT 108
           F +E   + +D+         ++  +S ++YA A      +  G     W A    + A 
Sbjct: 11  FCAESNEYGVDKAAWAESVCKVIGSSSYNAYAEAPTWLQMLGSGVFTMVWTAIVAFLIAF 70

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           ++G+L+G  R   NK +A+I   YVE+FRNIP +V +FF
Sbjct: 71  LLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109


>gi|253576692|ref|ZP_04854019.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843902|gb|EES71923.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 220

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  ++A++AEI R+G+  V RGQ EAA +LG+T   A R +++PQA++S++P + ++
Sbjct: 93  ITLSINSSAYLAEIFRAGIQGVDRGQGEAARSLGMTKGMAMRHIIIPQAIKSVLPAIGNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K SS+   +G A+L+    +++  T   +   LI   +Y  L+  ++  +     
Sbjct: 153 FITIIKESSIVSIIGTAELIYQAQSVVTITYDGMTPYLIIAIMYFILTFTLSRILGVFER 212

Query: 391 KIALKEKK 398
           K+   + +
Sbjct: 213 KLKTSDHR 220


>gi|254464309|ref|ZP_05077720.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
 gi|206685217|gb|EDZ45699.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
          Length = 432

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++  IP
Sbjct: 297 FLRVVIMITMFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYAQAMRLIILPQALKISIP 356

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + +  + L K+++L   +   DLV  + G I+  T
Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILAST 392


>gi|160899823|ref|YP_001565405.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160365407|gb|ABX37020.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 266

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 18/211 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+ ++A   V +  LG+VL   A RL+R    +     P + +  FL  G PTL+LI   
Sbjct: 73  TLASSAMAAVIALSLGLVL--LAGRLARPRIVR----WPSIAVIEFL-RGTPTLLLI--- 122

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y      P  G    I   T     ++L I LS  TAA +AE+ R+G++AVPRGQ +AA 
Sbjct: 123 YVCFLVLPAAG----IKLGTY--WMLTLPIGLS--TAAVVAEVYRAGVLAVPRGQTDAAR 174

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGLT  +  R V+ PQA+R I+P L +Q + ++K+++    V + +L+     +I    
Sbjct: 175 SLGLTEVQVFRFVVFPQALRYIVPALVAQLVIVVKDTTFGYIVTYGELMQNAKVLIANYH 234

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + + L+   +Y  ++  I+    RLN  +
Sbjct: 235 ALVPVYLVVAVLYCLVNYAISRASRRLNRPV 265


>gi|323126570|gb|ADX23867.1| putative glutamine-binding periplasmic protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 522

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491


>gi|311031016|ref|ZP_07709106.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           sp. m3-13]
          Length = 222

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 65/92 (70%), Gaps = 1/92 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+ P   ++ +A    + A+I+E++R+G++AV +GQ EAA+ALG+ +R+  + ++LPQ
Sbjct: 86  GITLEPVTAAI-LAFGLNSGAYISEVIRAGIMAVDKGQREAAMALGVPYRQMMKDIILPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+++I+P L ++Y+ L K S++   +G  D++
Sbjct: 145 ALKNILPALMNEYITLTKESAIVTVIGVMDVM 176


>gi|255310930|ref|ZP_05353500.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 6276]
 gi|255317230|ref|ZP_05358476.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 6276s]
          Length = 214

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 14/204 (6%)

Query: 189 IFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           I   S V G VL     T  SR+F  +  K L   Y+    + G P  + I + Y   F 
Sbjct: 21  ITAISLVCGFVLGWGIGTVNSRYFPCRISKFLGNFYVVA--VRGTPLFIQILIVY---FG 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L + N      +SP    L IAL+  +AA++AE VR+G+ A+P  Q EAA  LG T 
Sbjct: 76  LPSLIKVN------LSPLVAGL-IALTLNSAAYLAENVRAGINALPVQQWEAAKVLGYTG 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    +L PQ  ++I+P LT+++++L+K SS+ + VG  +L  V   I+ +    +E+ 
Sbjct: 129 PQIFLHILCPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           LI   +YL ++   + F  RL+ K
Sbjct: 189 LICAGLYLIMTSAFSYFA-RLSEK 211


>gi|139473094|ref|YP_001127809.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes str. Manfredo]
 gi|134271340|emb|CAM29558.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes str. Manfredo]
          Length = 522

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 501


>gi|254253996|ref|ZP_04947313.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124898641|gb|EAY70484.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 218

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 18/217 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++  A  FV S VLG+VL+L     +R         + +       I GLP +V +  
Sbjct: 19  VTIEITACAFVLSSVLGLVLALLKVSRNRAVSAAGSTIVNV-------IRGLPIIVQL-- 69

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P LG    +  S      + L IA S Y A    E  R+G+ A+ RGQ+EAA
Sbjct: 70  -FYMYFVLPDLG----VQLSAFQAGVLGLGIAYSAYQA----ENFRAGIEAIDRGQIEAA 120

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+G+      R V+LPQA R  +PP  +  + LLK+SS+A  +  A++   G  I + T
Sbjct: 121 HAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASST 180

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            Q + +  +   +YL+L + +   +NRL  ++AL+  
Sbjct: 181 FQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRRS 217


>gi|330988311|gb|EGH86414.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 365

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|309799781|ref|ZP_07693993.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
 gi|308116601|gb|EFO54065.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
          Length = 521

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 66/109 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G+++V +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILSVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|227115307|ref|ZP_03828963.1| glutamine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 219

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+     R V+ P A+R ++P
Sbjct: 90  FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFIL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRLKI 218


>gi|148379388|ref|YP_001253929.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931051|ref|YP_001383764.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153935865|ref|YP_001387314.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. Hall]
 gi|148288872|emb|CAL82956.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152927095|gb|ABS32595.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152931779|gb|ABS37278.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. Hall]
 gi|322805728|emb|CBZ03293.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium botulinum H04402 065]
          Length = 219

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   AA+++EI+R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + 
Sbjct: 94  IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRFQNLYYIILPQAVKISVPPLVNG 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
           + +LLK++SL   +   +L   G  I ++T +  E+ L     Y  L+ ++++   F+ +
Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEK 213

Query: 388 LNAK 391
            N K
Sbjct: 214 RNEK 217


>gi|50913614|ref|YP_059586.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS10394]
 gi|50902688|gb|AAT86403.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS10394]
          Length = 528

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  +
Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507


>gi|257877476|ref|ZP_05657129.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257811642|gb|EEV40462.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 226

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 20/162 (12%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRS 287
           G+P LVL+ L   L+F  P               +  +L  A+ C+T   +AFI EI R 
Sbjct: 67  GVPALVLLFL---LYFGLPY--------------QLSALSAAIICFTLTSSAFIGEIYRG 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +  V RGQ +AA ALGL+  K  RL++LPQA R  +P L++  ++LLK +SLA  +   
Sbjct: 110 SIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIP 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           D+      +  +T   + + ++   IY  L I+I     RL 
Sbjct: 170 DIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLE 211


>gi|229816603|ref|ZP_04446901.1| hypothetical protein COLINT_03660 [Collinsella intestinalis DSM
           13280]
 gi|229807809|gb|EEP43613.1| hypothetical protein COLINT_03660 [Collinsella intestinalis DSM
           13280]
          Length = 261

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 55/80 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y AA++AE++R+G+ AVPRGQMEAA + G +  +    ++LPQ  + I+PPL +Q
Sbjct: 108 LGVGLYHAAYVAEVIRTGIEAVPRGQMEAAQSQGFSRLQTYAYIVLPQTFKIILPPLCNQ 167

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            LNL+KN+S+   V   DL+
Sbjct: 168 ALNLVKNTSVLALVAGGDLM 187


>gi|167588266|ref|ZP_02380654.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 229

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 28/237 (11%)

Query: 169 MFLNNRGLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           MFL N     P L      T++  A  FV S VLG+VL+L   ++SR+    T       
Sbjct: 12  MFLQNALDFLPILLKGAIVTIEITACAFVLSSVLGLVLALL--KVSRNPLVSTAG----- 64

Query: 223 YISTFL--IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             ST +  I GLP +V +   + ++F  P LG    +  S      + L IA S Y A  
Sbjct: 65  --STIVNVIRGLPIIVQL---FYMYFVLPDLG----VQLSAFQAGVLGLGIAYSAYQA-- 113

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R+G+ A+ RGQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS+
Sbjct: 114 --ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSV 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A  +  A++   G  I + T Q + +  +   +YL+L + +   +NRL  ++AL+  
Sbjct: 172 ASTITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRRS 228


>gi|33598571|ref|NP_886214.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33574700|emb|CAE39357.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis]
          Length = 253

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 73/129 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L  YT++ +AE VR+G+ + P GQ  AA ALG+   +  R VLLP + R I+P
Sbjct: 109 FIPAVLCLGFYTSSRVAEQVRAGIESRPAGQRMAATALGMRPSQVYRYVLLPTSFRIILP 168

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ LNL+KN+S+A  +   +LV    ++   + Q  E        Y  L++++   M
Sbjct: 169 PLTSELLNLIKNTSVAFTIDLLELVGAARSMQEFSFQVFEAFAGATLCYFLLNLIVLRAM 228

Query: 386 NRLNAKIAL 394
             +  ++A+
Sbjct: 229 RYIETRLAV 237



 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T   A    I A  IG +VG  R + +K    +   YVE FRNIP LV 
Sbjct: 20  YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARIMGATYVEFFRNIPLLVQ 79

Query: 145 IFFLYKSVLSVLPI----PDHSIVLPFGMFL 171
           +F  Y  V  +LP+       SI  P+G+F+
Sbjct: 80  MFLWYFVVPEILPVQLGDAIKSIPPPWGIFI 110


>gi|67923501|ref|ZP_00516976.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501]
 gi|67854643|gb|EAM49927.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501]
          Length = 391

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 57/86 (66%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
             + ++AA++AE VR GL +VP+GQ EAA ALGL        V+LPQA+R +IP +  Q+
Sbjct: 269 GFTLFSAAYLAENVRGGLQSVPKGQTEAAKALGLNGFFVLIFVVLPQALRVVIPAIVGQF 328

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTII 357
           ++L K++SL   VG  DL+ +  +I+
Sbjct: 329 ISLFKDTSLLAIVGLVDLLGMSQSIL 354


>gi|16803780|ref|NP_465265.1| hypothetical protein lmo1740 [Listeria monocytogenes EGD-e]
 gi|47095666|ref|ZP_00233273.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224499540|ref|ZP_03667889.1| hypothetical protein LmonF1_07517 [Listeria monocytogenes Finland
           1988]
 gi|224503335|ref|ZP_03671642.1| hypothetical protein LmonFR_12615 [Listeria monocytogenes FSL
           R2-561]
 gi|254829262|ref|ZP_05233949.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|254900755|ref|ZP_05260679.1| hypothetical protein LmonJ_13104 [Listeria monocytogenes J0161]
 gi|254938146|ref|ZP_05269843.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|16411194|emb|CAC99818.1| lmo1740 [Listeria monocytogenes EGD-e]
 gi|47015951|gb|EAL06877.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258601674|gb|EEW14999.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258610760|gb|EEW23368.1| amino acid ABC transporter [Listeria monocytogenes F6900]
          Length = 213

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|289435076|ref|YP_003464948.1| amino acid ABC transporter, permease protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171320|emb|CBH27862.1| amino acid ABC transporter, permease protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 213

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|226306243|ref|YP_002766203.1| glutamate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|226185360|dbj|BAH33464.1| glutamate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
          Length = 226

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 12/129 (9%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  I  F +FGL   + + L      D P     N          F    + LS YTAA
Sbjct: 62  PLTLILLFCLFGLSQTLGVNLAKS---DSPTFLTDN---------NFRLAVLGLSVYTAA 109

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+ E +RSG+  VP GQ EA  +LGL+  +  RL++LPQA R++  PL S  + L KNS+
Sbjct: 110 FVCESLRSGINTVPVGQAEAGRSLGLSFAQNLRLIVLPQAFRAVTAPLGSVLIALTKNST 169

Query: 340 LAVAVGFAD 348
           +A  +G ++
Sbjct: 170 IAAVIGVSE 178



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-P 141
           S Y   IL  F  T  L F   I A IIG L+ A R+S   +  ++   YV VFRN P  
Sbjct: 5   SKYGDQILEAFWTTIQLTFFSAIGAVIIGVLIAAMRVSPVPVARFLGTAYVTVFRNTPLT 64

Query: 142 LVVIFFLY 149
           L+++F L+
Sbjct: 65  LILLFCLF 72


>gi|148642866|ref|YP_001273379.1| polar amino acid ABC transporter, permease component
           [Methanobrevibacter smithii ATCC 35061]
 gi|222445099|ref|ZP_03607614.1| hypothetical protein METSMIALI_00718 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350333|ref|ZP_05975750.1| ABC transporter, permease protein, polar amino acid uptake family
           [Methanobrevibacter smithii DSM 2374]
 gi|148551883|gb|ABQ87011.1| polar amino acid ABC transporter, permease component
           [Methanobrevibacter smithii ATCC 35061]
 gi|222434664|gb|EEE41829.1| hypothetical protein METSMIALI_00718 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861117|gb|EFC93415.1| ABC transporter, permease protein, polar amino acid uptake family
           [Methanobrevibacter smithii DSM 2374]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 84/139 (60%), Gaps = 3/139 (2%)

Query: 256 FIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           ++ G+++SP++  +S+ IA S   +A+ AEI R G+ A+P+GQ EAA  LG    +   +
Sbjct: 75  YVFGASLSPDYRMISVIIAFSINYSAYFAEIYRGGIEAIPKGQYEAAQVLGYNKLETFFI 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ ++ ++P +T++ + L+K++SL+  +   ++ +V   I       + +++  +F 
Sbjct: 135 IILPQVIKIVLPSITNEVITLVKDTSLSFVIAIPEMFTVAKQIAAAEASIMALLIAGVFY 194

Query: 374 YLSLSIMIALFMNRLNAKI 392
           Y+  ++++A  M  +  K+
Sbjct: 195 YI-FNVIVAFVMEYIEEKL 212


>gi|325568891|ref|ZP_08145184.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325157929|gb|EGC70085.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 226

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 20/162 (12%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRS 287
           G+P LVL+ L   L+F  P               +  +L  A+ C+T   +AFI EI R 
Sbjct: 67  GVPALVLLFL---LYFGLPY--------------QLSALSAAIICFTLTSSAFIGEIYRG 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +  V RGQ +AA ALGL+  K  RL++LPQA R  +P L++  ++LLK +SLA  +   
Sbjct: 110 SIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIP 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           D+      +  +T   + + ++   IY  L I+I     RL 
Sbjct: 170 DIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLE 211


>gi|319638304|ref|ZP_07993067.1| amino acid permease integral membrane protein [Neisseria mucosa
           C102]
 gi|317400577|gb|EFV81235.1| amino acid permease integral membrane protein [Neisseria mucosa
           C102]
          Length = 238

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIIAPQAFRVAVPPLSNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|302024477|ref|ZP_07249688.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis 05HAS68]
          Length = 415

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 277 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFV 336

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   +   IY  L+  +
Sbjct: 337 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTV 385


>gi|239834956|ref|ZP_04683284.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239823019|gb|EEQ94588.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 308

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 113/218 (51%), Gaps = 24/218 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF----GLPTLVLIALKYQLHF 246
           +F F +GI+L++   RLS         A P+L  +++L      G+P LV +   Y L  
Sbjct: 81  IFGFAIGIILAVM--RLS---------ANPVLQWASWLWIWFFRGVPPLVQLIFWYNLAL 129

Query: 247 DKPVLG--------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
             P L          +++   + ++P   +L + LS   +A+ AE +R+G+ A+  GQ E
Sbjct: 130 LVPNLTIGIPFGPTLWSWDMNTLITPMSAAL-LGLSFTESAYAAETIRAGIQAINPGQTE 188

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA  LG+T  +  + ++LPQA+R IIPP+ +  +++LK +SL   +   DL+     I +
Sbjct: 189 AAATLGMTRFQIMKRIVLPQAIRIIIPPIGNDTISMLKFTSLVSVLALPDLLYSAQMIYS 248

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +T Q I ++++    YL LS  + +  + +   +  ++
Sbjct: 249 RTYQTIPLLIVATIWYLILSTALTIIEHHIENHLKSRQ 286



 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +L F+ MI    IG ++   RLSAN ++ W   +++  FR +PPLV + F 
Sbjct: 65  ILAGLARTLFLTFAAMIFGFAIGIILAVMRLSANPVLQWASWLWIWFFRGVPPLVQLIFW 124

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           Y   L V   P+ +I +PFG  L +  ++  TL    +A +   SF
Sbjct: 125 YNLALLV---PNLTIGIPFGPTLWSWDMN--TLITPMSAALLGLSF 165


>gi|153836364|ref|ZP_01989031.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|149750266|gb|EDM61011.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
          Length = 306

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 1/160 (0%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L L  L    + +   L  F F G S +     S  + +   ++A+IAE+VR+GL +
Sbjct: 142 IPLLGLEDLLRNYNGEPNALQSFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRAGLQS 200

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+   +   ++  
Sbjct: 201 IDQGQWEAANSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTF 260

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  + N +G   EI LI  F Y  +   ++L    +  K
Sbjct: 261 VGTEMANSSGYIFEIWLIVGFSYFLICFGLSLIFRYIEKK 300


>gi|139438442|ref|ZP_01771958.1| Hypothetical protein COLAER_00948 [Collinsella aerofaciens ATCC
           25986]
 gi|133775981|gb|EBA39801.1| Hypothetical protein COLAER_00948 [Collinsella aerofaciens ATCC
           25986]
          Length = 277

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 73/118 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F  L + ++   A  +AEI R+G+ AVPRGQ+EAA ALGL+  K T  ++LPQA+R I
Sbjct: 143 PSFWMLTLPVALAAAGVLAEIFRAGVNAVPRGQVEAAQALGLSKAKITFKIVLPQAIRFI 202

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           IP L SQ + ++K++++A  V + DL+     +I      + + L+   IY+ +++ I
Sbjct: 203 IPSLISQLVVVVKDTTVAYVVSYPDLMQNARVLITNYDALVSVYLVIAVIYILINVAI 260



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  +A +    A ++G  +  GR S  K +  +CRV  + FR +P L+ I+F 
Sbjct: 72  LLAGFEGTVKVALTAGAIALVLGLALMLGRTSDIKPLQLVCRVLTDFFRGVPSLLFIYFF 131

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +      L +P + I LP
Sbjct: 132 F------LVLPQYKIALP 143


>gi|94993627|ref|YP_601725.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10750]
 gi|94547135|gb|ABF37181.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10750]
          Length = 528

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  +
Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507


>gi|94989745|ref|YP_597845.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|94543253|gb|ABF33301.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10270]
          Length = 528

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  +
Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507


>gi|297162207|gb|ADI11919.1| putative ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 493

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ + AA+ AEIVR G+++V RGQ+EAA ALG+   +  R ++LPQAMR+I+P   S+
Sbjct: 330 IGLTLHQAAYCAEIVRGGVLSVDRGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGSE 389

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387
            ++LLK +S+   +   +L      I  + G  I ++++   W     S+   +  ++ R
Sbjct: 390 IISLLKGTSVVYVMAIGELFYQVKVIYGRNGMVIPLLMVATAWYVFLTSVLSAVQYYVER 449

Query: 388 LNAK 391
             A+
Sbjct: 450 HFAR 453


>gi|293596721|ref|ZP_06684318.1| amino acid ABC transporter [Listeria monocytogenes J2818]
 gi|293591776|gb|EFG00111.1| amino acid ABC transporter [Listeria monocytogenes J2818]
          Length = 221

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 94  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 154 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 212

Query: 388 LNAK 391
           L  +
Sbjct: 213 LEKR 216


>gi|261250641|ref|ZP_05943216.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260939210|gb|EEX95197.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 223

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 96/170 (56%), Gaps = 15/170 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+       FS +L ++L+       R F       L  LYIS F   G P LV + L 
Sbjct: 22  TMEMATWGLFFSLILSVILANI-----RVFRIPVLDQLSQLYISFFR--GTPLLVQLFL- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L++  P +  F F+ G      F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 74  --LYYGLPQI--FPFLVGLDA---FGAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|255026867|ref|ZP_05298853.1| hypothetical protein LmonocytFSL_12011 [Listeria monocytogenes FSL
           J2-003]
          Length = 213

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|110807126|ref|YP_690646.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|110616674|gb|ABF05341.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
          Length = 367

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 62/96 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L++RK   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALSYRKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|17546824|ref|NP_520226.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17429124|emb|CAD15812.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 217

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           Q+  + P+L Q    F G S    E   + +  I L+ YT+A++AE+ R  + A+PRGQ 
Sbjct: 59  QIFQNTPLLMQMFLVFFGASMAGLEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQW 118

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA+ +L + + +  R V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + 
Sbjct: 119 EASASLAMGYFQQMRHVVLPQAVRMSIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSVLA 178

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           N T Q   I  +    YL+L   ++L  + L  K+
Sbjct: 179 NATFQPFLIYGLVGMAYLALCWPLSLCASHLEKKL 213


>gi|330887727|gb|EGH20388.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 365

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|306828018|ref|ZP_07461284.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|304429799|gb|EFM32842.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 522

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 501


>gi|83718147|ref|YP_440543.1| glutamine ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|83651972|gb|ABC36036.1| glutamine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 230

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%)

Query: 177 SFPTLTMDTNAKIFVF------SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + P LT      +F+        F++G++  +F     R +       L  +YI   LI 
Sbjct: 23  ALPDLTDGVRLTVFIAFFGLAGGFLVGMIAGMF-----RAYGPAALNVLTQVYIE--LIR 75

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V +     L+F  P+L      G         +  +A++  + A++AE+VR  L+
Sbjct: 76  GTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAYLAEVVRGALL 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+G  EA +A+GL+  +    ++ P A R +I PL +Q +  LK++SL + +G  +L 
Sbjct: 126 SIPKGVTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
             G  II    QA+EI      IYL+L+
Sbjct: 186 RKGQEIIAGNFQAVEIWTAVAAIYLALT 213


>gi|21910156|ref|NP_664424.1| putative ABC transporter (permease) [Streptococcus pyogenes
           MGAS315]
 gi|28896145|ref|NP_802495.1| ABC transporter (permease) [Streptococcus pyogenes SSI-1]
 gi|71903352|ref|YP_280155.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|21904349|gb|AAM79227.1| putative ABC transporter (permease) [Streptococcus pyogenes
           MGAS315]
 gi|28811395|dbj|BAC64328.1| putative ABC transporter (permease) [Streptococcus pyogenes SSI-1]
 gi|71802447|gb|AAX71800.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS6180]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWIIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|320329011|gb|EFW85010.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330880665|gb|EGH14814.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 220

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HEGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|289647198|ref|ZP_06478541.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 365

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|94987869|ref|YP_595970.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS9429]
 gi|94541377|gb|ABF31426.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS9429]
          Length = 528

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  +
Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507


>gi|9929260|emb|CAC05299.1| putative transmembrane protein [Lactobacillus reuteri]
          Length = 233

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 106/201 (52%), Gaps = 6/201 (2%)

Query: 191 VFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + SF+ G++++L     RLSR    + G  + L +I++F ++   +  L+   + + F  
Sbjct: 25  IISFLFGLIIALVTALIRLSR----QRGAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L     +        F +  I  S  T A+ +E +R+ + +VP GQ EA  A+G+T  
Sbjct: 81  PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAISSVPTGQWEAGAAIGMTRL 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA+R  +PPL++ +++L+K++SLA ++   ++ +V   I  +  Q + +  
Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
           +   +Y + + +++ F   L 
Sbjct: 201 LVAMVYAAFTTILSYFQGYLE 221


>gi|68249636|ref|YP_248748.1| amino-acid ABC transporter permease protein [Haemophilus influenzae
           86-028NP]
 gi|319897441|ref|YP_004135638.1| amino-acid abc transporter permease protein [Haemophilus influenzae
           F3031]
 gi|68057835|gb|AAX88088.1| probable amino-acid ABC transporter permease protein [Haemophilus
           influenzae 86-028NP]
 gi|317432947|emb|CBY81314.1| probable amino-acid ABC transporter permease protein [Haemophilus
           influenzae F3031]
          Length = 225

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I   + + +  P
Sbjct: 32  FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 86

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+
Sbjct: 87  EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V     N T    E ILI
Sbjct: 139 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 195

Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393
           +     IY     +++   +RL  +++
Sbjct: 196 YSEAALIYWIFCFVLSFLQDRLEIRLS 222


>gi|116627490|ref|YP_820109.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116100767|gb|ABJ65913.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 235

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 15/161 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250
           F  +LG+++SL     ++    K  + L  LY+  F   G P +V I + + L H + P 
Sbjct: 39  FGTILGVLVSL-----AKRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 91

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + QF  +    S + P      I LS  + A+I+E VR+G+ ++P+GQ+EAA +LG+   
Sbjct: 92  V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQIEAAYSLGIRPW 146

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
              R V+LPQA+++I+P L ++++ ++K+SSL   +G  +L
Sbjct: 147 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 187


>gi|296535456|ref|ZP_06897646.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296264215|gb|EFH10650.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 229

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 65/105 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS   AA+++E VR+G+ AVP+GQ EAA+ALGL   +A RLV+ PQA+R IIPPL + 
Sbjct: 96  LGLSLNEAAYLSETVRAGIQAVPKGQREAALALGLRGVQAFRLVIWPQALRIIIPPLGNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
              LLK +S+A  +   +L+     +I +    +E+  +    YL
Sbjct: 156 VNGLLKTTSVASVISMDELLRRTQILIQERFLVLELFAVAALYYL 200


>gi|251780837|ref|ZP_04823757.1| L-cystine transport system permease protein TcyB [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243085152|gb|EES51042.1| L-cystine transport system permease protein TcyB [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 213

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 30/194 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++      + S  LGIV++L  T       + TG      +  PLL     + FGLPT
Sbjct: 17  VTLEVFVLTLILSIPLGIVVALARTSKFLVLRKLTGIYVLIMRGTPLLLQIVVIFFGLPT 76

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +        + FD+                 F +  +A     AA+  EI RSG+I++ +
Sbjct: 77  M-------GITFDR-----------------FTAAILAFVLNYAAYFGEIFRSGIISIDK 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LGLT +     ++LPQA++ +IPP+ ++   L+K++SL   +G  +L+ +  
Sbjct: 113 GQYEAAEMLGLTSKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIAK 172

Query: 355 TIINQTGQAIEIIL 368
              N+    I +IL
Sbjct: 173 IASNRDVTLIPLIL 186


>gi|146320335|ref|YP_001200046.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|145691141|gb|ABP91646.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
          Length = 194

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 60/79 (75%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  ++A R V++PQA+++I+P L ++
Sbjct: 65  IVISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKQAMRYVIMPQAIKNILPALGNE 124

Query: 331 YLNLLKNSSLAVAVGFADL 349
           ++ ++K+SSL   +G  +L
Sbjct: 125 FVTIVKDSSLLSTIGVMEL 143


>gi|312959112|ref|ZP_07773631.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311286882|gb|EFQ65444.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 365

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A++AE+VR GL A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|257487408|ref|ZP_05641449.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289628607|ref|ZP_06461561.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|330867830|gb|EGH02539.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|331009000|gb|EGH89056.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 365

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|253576767|ref|ZP_04854093.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843798|gb|EES71820.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 219

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 19/152 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ FGLP +             PV+G++       V   F++  +A +  
Sbjct: 61  RGTPLLLQMLFVCFGLPVI-------------PVIGEY------LVMDRFVAACVAFTLN 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+ +GQ EAA  LGL+  + T  ++LPQ +R  +P ++++ + L+K
Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEAAKVLGLSRWQTTTRIVLPQMLRIALPAVSNESITLVK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +++L  AV   +L+    T +N+    +  +L
Sbjct: 162 DTALLYAVAVPELLHFAQTAVNRDFTIVPFVL 193


>gi|240117510|ref|ZP_04731572.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID1]
 gi|268603209|ref|ZP_06137376.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID1]
 gi|268587340|gb|EEZ52016.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID1]
          Length = 238

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEVALVYWCFCKVLFLIQARLEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|298485802|ref|ZP_07003881.1| ABC-type amino acid transport system, permease component yhdY
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298159828|gb|EFI00870.1| ABC-type amino acid transport system, permease component yhdY
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 365

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|118473089|ref|YP_889613.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Mycobacterium smegmatis str. MC2 155]
 gi|118174376|gb|ABK75272.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mycobacterium smegmatis str. MC2 155]
          Length = 222

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 81/151 (53%), Gaps = 10/151 (6%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           ++F  PV+G         + P  +   IA L  + A +++E+ R+G+ A+P+GQ EA  A
Sbjct: 80  VYFGLPVVG---------IRPSALVTGIAVLGVHYACYMSEVYRAGIDAIPQGQWEACTA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L L+  +  R V+LPQ +R I+P   +Q + L K +   + +G  ++V+V      Q  +
Sbjct: 131 LSLSPYRTWRAVVLPQVVRRILPSTGNQVIALFKETPFLIVIGVLEMVTVANQFGGQNYR 190

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            IE I I   I+L+ S   ++ M +L  ++A
Sbjct: 191 YIEPITIAGLIFLAASYPTSVLMRKLEIRVA 221


>gi|71902896|ref|YP_279699.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS6180]
 gi|71801991|gb|AAX71344.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS6180]
          Length = 528

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 389 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 448

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  +
Sbjct: 449 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERR 507


>gi|228475903|ref|ZP_04060613.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis SK119]
 gi|228270058|gb|EEK11528.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis SK119]
          Length = 484

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 57/80 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI R+G+ AV +GQ EAA  LGL + K  R ++LPQA+++I+P L ++
Sbjct: 359 IALVINSSAYIAEIFRAGINAVDKGQTEAAQCLGLNYSKTMRYIILPQAIKNILPALGNE 418

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 419 FVTLIKESSIVSTIGVGEIM 438



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 72  IDQGIVPYTSDSS----YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +D+       DSS    Y    + G  NT  ++  G++   ++G L+   +LS  KL++W
Sbjct: 259 MDKASKDMQDDSSFFDKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSW 318

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           I  +Y+E  R  P LV +F ++    +VL
Sbjct: 319 IASIYIEFLRGTPMLVQVFLVFFGTTAVL 347


>gi|254382234|ref|ZP_04997595.1| glutamate transporter permease [Streptomyces sp. Mg1]
 gi|194341140|gb|EDX22106.1| glutamate transporter permease [Streptomyces sp. Mg1]
          Length = 292

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 42/214 (19%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   VFS +LG VL+  A RLS H         PL +I+T  +     +P LV+I
Sbjct: 79  TLKAFAYASVFSLLLGAVLA--AGRLSVH--------RPLRWIATLCVEFFRAMPVLVMI 128

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                ALK Q                        +L   L+ Y  + +AE+ R+G+ AV 
Sbjct: 129 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINAVD 167

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA ALG+   + T  VL PQA+R+++P + SQ +  LK++SL   + + + +  G
Sbjct: 168 RGQREAAYALGMRKTQVTTYVLAPQALRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 227

Query: 354 GTIINQTGQA---IEIILIWMFIYLSLSIMIALF 384
             I +        I +++I   IY+ + ++++ F
Sbjct: 228 KLIASNLDYDLPFIPVVMIISPIYIGMCMLLSWF 261



 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           ++G ++ AGRLS ++ + WI  + VE FR +P LV+IFF++ + L V P+P
Sbjct: 92  LLGAVLAAGRLSVHRPLRWIATLCVEFFRAMPVLVMIFFIFVA-LKVQPLP 141


>gi|16760898|ref|NP_456515.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765290|ref|NP_460905.1| ABC-type amino acid transporter permease component [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29141410|ref|NP_804752.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62180526|ref|YP_216943.1| putative ABC-type amino acid transporter, permease component
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|167552820|ref|ZP_02346571.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167993521|ref|ZP_02574615.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168239188|ref|ZP_02664246.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168822992|ref|ZP_02834992.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194735316|ref|YP_002114985.1| amino acid ABC transporter His/Glu/Gln/Arg/opine family, permease
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197248583|ref|YP_002146071.1| amino acid ABC transporter His/Glu/Gln/Arg/opine family, permease
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|204930985|ref|ZP_03221811.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|213053511|ref|ZP_03346389.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213417112|ref|ZP_03350256.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
 gi|213426354|ref|ZP_03359104.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213855799|ref|ZP_03384039.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|224583547|ref|YP_002637345.1| ABC-type amino acid transporter, permease component [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|238912475|ref|ZP_04656312.1| putative ABC-type amino acid transporter, permease component
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|289824074|ref|ZP_06543672.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|25296622|pir||AB0750 probable ABC transporter membrane protein STY2160 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16420486|gb|AAL20864.1| putative ABC-type amino acid transporter [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16503195|emb|CAD05701.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29137037|gb|AAO68601.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|62128159|gb|AAX65862.1| putative ABC-type amino acid transporter, permease component
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|194710818|gb|ACF90039.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197212286|gb|ACH49683.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197288074|gb|EDY27461.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|204320029|gb|EDZ05234.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205322601|gb|EDZ10440.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205328383|gb|EDZ15147.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205340660|gb|EDZ27424.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|224468074|gb|ACN45904.1| putative ABC-type amino acid transporter, permease component
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|261247118|emb|CBG24941.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267993938|gb|ACY88823.1| putative ABC-type amino acid transporter permease component
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301158466|emb|CBW17976.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312912942|dbj|BAJ36916.1| amine ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085430|emb|CBY95211.1| probable amino-acid ABC transporter permease protein yckA
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321224595|gb|EFX49658.1| Cystine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322616945|gb|EFY13853.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618185|gb|EFY15077.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322625855|gb|EFY22674.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322626307|gb|EFY23117.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322632722|gb|EFY29467.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322639064|gb|EFY35757.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322640505|gb|EFY37158.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645986|gb|EFY42503.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322649893|gb|EFY46314.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655501|gb|EFY51809.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322660279|gb|EFY56517.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322662960|gb|EFY59167.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668145|gb|EFY64304.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322674095|gb|EFY70189.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322675552|gb|EFY71626.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322683036|gb|EFY79052.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322686730|gb|EFY82708.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322715002|gb|EFZ06573.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323130230|gb|ADX17660.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323195381|gb|EFZ80561.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323199272|gb|EFZ84367.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323204437|gb|EFZ89443.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207527|gb|EFZ92475.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323211852|gb|EFZ96683.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217512|gb|EGA02231.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323223590|gb|EGA07905.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323231534|gb|EGA15647.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323235977|gb|EGA20056.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240547|gb|EGA24590.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323245439|gb|EGA29439.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323250209|gb|EGA34101.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253980|gb|EGA37804.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255493|gb|EGA39254.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262090|gb|EGA45653.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323266213|gb|EGA49703.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270678|gb|EGA54119.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 222

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|319943563|ref|ZP_08017845.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319743378|gb|EFV95783.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 217

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 63/102 (61%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG    P+F +  +A +   AA+ AEI R+G+ ++ RGQ E A  LG+ + +  R +++P
Sbjct: 79  GGGIQLPDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEGAKVLGMNYPQTMRRIVMP 138

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           Q +R ++PPL+++++ L+K++SL   +   DL+     I+ +
Sbjct: 139 QVIRRVLPPLSNEFITLVKDTSLIYVLALNDLLRAARGIVQR 180


>gi|307306766|ref|ZP_07586507.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306902057|gb|EFN32655.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 220

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 73/122 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ Y+ A++AE+ R GLIA+P GQ EA +A+GLT  +    +++P  +RS++P L S  +
Sbjct: 97  LAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMI 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L K++SLA A+   +L      I  +T + +E  ++   +Y++   ++A  M     ++
Sbjct: 157 SLFKDTSLAAAIAVPELTFEARKINVETFRVVETWIVASCLYVATCSLLAALMRAAERRL 216

Query: 393 AL 394
           A+
Sbjct: 217 AV 218


>gi|170739979|ref|YP_001768634.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168194253|gb|ACA16200.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 219

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 105/206 (50%), Gaps = 14/206 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F+LG  L+ F   L R    +  + L   Y+   +I GLP L+L+   + ++F   V+G
Sbjct: 26  AFLLG-SLAGFGVMLLRIARARWVRRLAFAYVQ--VIQGLPLLILL---FCVYFGLGVIG 79

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    +SP  ++  I+L  Y +AF+ EI R  + AVPR Q EAA  L L+  +A  
Sbjct: 80  -------VELSP-LVAAAISLMVYCSAFLGEIWRGCVEAVPRTQGEAAECLALSRWQALV 131

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA R  +PP    ++ +LK++SLA  VGF +L      I N   Q   +  +   
Sbjct: 132 DVILPQAARIAVPPTVGFFVQVLKSTSLASVVGFVELTRASQLINNSIFQPFLVFGLAGA 191

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           +Y +L   ++ +  RL  K+ +  ++
Sbjct: 192 LYFALCYPLSRWSRRLERKLHVGRRQ 217


>gi|330833503|ref|YP_004402328.1| amino acid ABC transporter amino acid-binding protein/permease
           [Streptococcus suis ST3]
 gi|329307726|gb|AEB82142.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis ST3]
          Length = 521

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   +   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTV 491


>gi|297627339|ref|YP_003689102.1| polar amino acid ABC transporter, inner membrane protein
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923104|emb|CBL57691.1| polar amino acid ABC transporter, inner membrane protein
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 212

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 69/120 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L   TA ++AEI R G++AV +GQ EAA ALGL    +   V+ PQAMR++ P LT+ 
Sbjct: 85  IGLGIITAGYLAEIFRGGMLAVRKGQFEAANALGLGGWTSFTRVVAPQAMRAMQPGLTTY 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K+SS+A  +G  ++V    +    + + + +      IYL +S+ + L   R+ A
Sbjct: 145 SIGLIKDSSIASVIGVTEMVYTANSYAKISKEGVLLFFEAALIYLVISVPLGLLARRIEA 204


>gi|224371698|ref|YP_002605862.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
 gi|223694415|gb|ACN17698.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
          Length = 384

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 58/87 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I +  ++AA+IAE+VR GL A+P+GQ+EAA +LGL     T  V+LPQA+R ++P
Sbjct: 253 LLRVQIGIILFSAAYIAEVVRGGLQAIPQGQIEAATSLGLPGWVVTAFVVLPQALRHVVP 312

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            L  + + L K++SL + VG  D + +
Sbjct: 313 SLIGRCVALFKDTSLVIIVGLLDFLGM 339


>gi|170780723|ref|YP_001709055.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169155291|emb|CAQ00394.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 221

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 21/224 (9%)

Query: 177 SFPTLTMDT---NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           SF  L ++T      + + +F LG+ ++L    L R +  +    +   YIS  ++ G P
Sbjct: 11  SFGPLALETIRGTIPLALVTFALGLAIAL-GLALMRLYGNRLVSGIARFYIS--VVRGTP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +   + + +  P +G         V P + S  IALS     + AEI+R+ +++VP
Sbjct: 68  LLVQL---FVIFYGLPSIG--------VVLPPWPSAVIALSLNVGGYAAEIIRASILSVP 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA   +G++     R +++PQA R  +PPL++ +++L+K++SLA  +   +L    
Sbjct: 117 RGQWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKDTSLASVILVTELFKQA 176

Query: 354 GTIINQTGQ----AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I + T +     +E  LI+  + L LS        RL+  +A
Sbjct: 177 QLIASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRYVA 220


>gi|139473935|ref|YP_001128651.1| transport system membrane protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134272182|emb|CAM30427.1| transport system membrane protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|78357350|ref|YP_388799.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78219755|gb|ABB39104.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 261

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 91/163 (55%), Gaps = 16/163 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV      QL +    LG+F  +      P  ++  IA+S    A++ E+ R+G+ 
Sbjct: 106 GIPLLV------QLFYIYYALGRFLQV------PSMVAAVIAMSVCYGAYMGEVFRAGID 153

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EA+ +LG  + +   LV+LPQA R+I+PP+ ++++ +LK++SL   +  AD++
Sbjct: 154 SIDKGQTEASRSLGFNNVQTMFLVILPQAWRTILPPVGNEFIAMLKDTSLVSILAVADVL 213

Query: 351 SVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389
             G     ++    E    + LI++ I L LS  +++   RLN
Sbjct: 214 RRGREFAAESFLYFETYTMVALIYLVITLLLSKAVSIMEARLN 256


>gi|15674926|ref|NP_269100.1| putative ABC transporter permease [Streptococcus pyogenes M1 GAS]
 gi|71910520|ref|YP_282070.1| cystine transporter permease [Streptococcus pyogenes MGAS5005]
 gi|209559254|ref|YP_002285726.1| Probable amino-acid ABC transporter permease protein yckA
           [Streptococcus pyogenes NZ131]
 gi|251782585|ref|YP_002996888.1| cystine transport system permease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|13622068|gb|AAK33821.1| putative ABC transporter (permease) [Streptococcus pyogenes M1 GAS]
 gi|71853302|gb|AAZ51325.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS5005]
 gi|209540455|gb|ACI61031.1| Probable amino-acid ABC transporter permease protein yckA
           [Streptococcus pyogenes NZ131]
 gi|242391215|dbj|BAH81674.1| cystine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|330975708|gb|EGH75774.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 365

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|257867389|ref|ZP_05647042.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257873720|ref|ZP_05653373.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257801445|gb|EEV30375.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257807884|gb|EEV36706.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 226

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 20/162 (12%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRS 287
           G+P LVL+ L   L+F  P               +  +L  A+ C+T   +AFI EI R 
Sbjct: 67  GVPALVLLFL---LYFGLPY--------------QLSALSAAIICFTLTSSAFIGEIYRG 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +  V RGQ +AA ALGL+  K  RL++LPQA R  +P L++  ++LLK +SLA  +   
Sbjct: 110 SIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLAAMITIP 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           D+      +  +T   + + ++   IY  L I+I     RL 
Sbjct: 170 DIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLE 211


>gi|171058821|ref|YP_001791170.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170776266|gb|ACB34405.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 366

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 86/147 (58%), Gaps = 12/147 (8%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A  L R       ++L  LY+   LI G+P   LI++ +   F  P+L        S  S
Sbjct: 178 AVALGRRSKLPAIRSLCTLYVE--LIRGVP---LISVLFMASFMFPLLMP------SGTS 226

Query: 264 PE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           P+  + + + ++ ++AA++AEIVR+GL A+P GQ+EAA ++GL   +  RLV+LPQA+ +
Sbjct: 227 PDVLLRVLVGITLFSAAYMAEIVRAGLQAIPAGQLEAAASVGLGWWQTQRLVVLPQALAA 286

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++P L + ++ + K++SL   V   +L
Sbjct: 287 VVPSLMNNFIAIFKDTSLITVVSLYEL 313


>gi|71737094|ref|YP_273400.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557647|gb|AAZ36858.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 365

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|89896132|ref|YP_519619.1| hypothetical protein DSY3386 [Desulfitobacterium hafniense Y51]
 gi|89335580|dbj|BAE85175.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 224

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 109/215 (50%), Gaps = 30/215 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALKY 242
           V S  LG++LSL   R+SR    ++         +  PL+    F+ FGLP +       
Sbjct: 32  VMSVPLGLMLSL--GRISRFGVLRSAIGVYIWVFRGTPLMLQLLFVYFGLPFI------- 82

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 PV+G+        +  +F +  +A     AA+ AEI R+G+ ++ RGQ E A A
Sbjct: 83  ------PVIGEI------LILTDFQAAILAFVLNYAAYFAEIFRAGIQSIERGQYEGARA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T+ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   DL+     ++ +   
Sbjct: 131 LGMTYGQLMRRIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMNDLLRTTRALVQRDFT 190

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I+  +F YL +++++     RL  + A  ++
Sbjct: 191 MTPFIVAGVF-YLLMTLVLTWGFQRLEKRYAAYDE 224


>gi|317053654|ref|YP_004118788.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952759|gb|ADU72232.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 220

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 26/159 (16%)

Query: 224 ISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +  FLI FGLP+L        LH   PV G                  IALS Y  A++ 
Sbjct: 71  VQLFLIYFGLPSL-------GLHLSPPVAG-----------------IIALSLYCGAYMT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+GL+++PRG  EA  ALGL+ R+  R VL   AM+++ P L SQ +  L  +SL  
Sbjct: 107 EILRAGLVSLPRGLSEAGEALGLSKRQIIRYVLTLPAMQNVFPALASQMVLTLIGTSLIS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEI-ILIWMFIYLSLSIM 380
            +G  ++   G  + ++T ++ EI +LI    + ++S+M
Sbjct: 167 QIGVEEIFHSGSFVDSRTFRSFEIYLLICGLYFFAVSLM 205


>gi|190894720|ref|YP_001985013.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700381|gb|ACE94463.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 281

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI RSG+ ++ RGQ EA+ ++G       R ++LPQA+  IIPP  +Q
Sbjct: 154 LALSLCYGAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQ 213

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++++LK+SSL   +G  +L+ +  T+  +T Q +E+++    +Y  +SI + L   R+  
Sbjct: 214 FISMLKDSSLVSVIGVWELMFLARTLGQKTFQHMEMLISAAMLYWIMSIGLELIQARIER 273

Query: 391 KIALKEKK 398
             A  + +
Sbjct: 274 HYARSKVR 281


>gi|167755200|ref|ZP_02427327.1| hypothetical protein CLORAM_00705 [Clostridium ramosum DSM 1402]
 gi|167705250|gb|EDS19829.1| hypothetical protein CLORAM_00705 [Clostridium ramosum DSM 1402]
          Length = 234

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 71/120 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AEIVRSG+ +V RGQ E A++LG+T  +  + ++LPQA+R+  P + +Q++
Sbjct: 109 ISINTGAYMAEIVRSGIQSVDRGQSEGALSLGMTRVQTMKYIILPQAIRNSFPAIGNQFI 168

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K+SS+   +G  +L     +I   T       LI   +YL L+ +  + +N +  +I
Sbjct: 169 INIKDSSMLNVIGVVELFFQSSSIAGSTMSYSATFLITCLVYLCLTSIATILLNIIEKRI 228


>gi|94988394|ref|YP_596495.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992276|ref|YP_600375.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS2096]
 gi|94541902|gb|ABF31951.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94545784|gb|ABF35831.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS2096]
          Length = 216

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWIIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|330950962|gb|EGH51222.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 279

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 149 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 208

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 209 FIALFKDTSLVIIIGLFDLLN 229


>gi|311103257|ref|YP_003976110.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 4 [Achromobacter
           xylosoxidans A8]
 gi|310757946|gb|ADP13395.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 4
           [Achromobacter xylosoxidans A8]
          Length = 229

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP---------TLVLIALKYQL 244
           F  G+  +L  T L+       G  L ++ +S F I  +P         ++ L+ + +  
Sbjct: 17  FKTGMTFTLTLTALAGVMGLALGTLLAMMRLSRFKILSVPAGIYVNVMRSIPLLLVIFWF 76

Query: 245 HFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +F  P +  +  +G  T      F S  I  + + AA+  EI+R+G+ ++ RGQ+ A++A
Sbjct: 77  YFLVPYIAAW-VVGSPTPLRVGAFNSAVITFTLFEAAYFCEIMRAGIQSIARGQVSASMA 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL H +  R V+LPQA R+++P L ++ + L +++SL   +   D +     I  + G+
Sbjct: 136 LGLNHWQGMRYVVLPQAFRNMLPALLTRIIILFQDTSLVYVLSLTDFLGAAAKIGQRDGR 195

Query: 363 AIEIILIWMFIY 374
            +E+ L    +Y
Sbjct: 196 LVELYLFVAVVY 207


>gi|160936636|ref|ZP_02084003.1| hypothetical protein CLOBOL_01526 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440427|gb|EDP18172.1| hypothetical protein CLOBOL_01526 [Clostridium bolteae ATCC
           BAA-613]
          Length = 222

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 27/233 (11%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D + V  +  FL +  L    LT+   A   V  F+LGIVL+L           K  K  
Sbjct: 4   DFTSVWQYWPFLYHGAL----LTLKITAICAVLGFLLGIVLALV----------KISKYK 49

Query: 220 PLLYISTFL--IF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           PL++   F   IF G P LV + +   +HF  P L  F     +T     ++     +  
Sbjct: 50  PLIWFGRFYTSIFRGTPLLVQLCI---VHFGLPQLLGFTL---TTTQSGILTF----TLN 99

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+++EI R G++ V +GQ EA+++LG+ +    + +++PQA++ I+P L ++ + LLK
Sbjct: 100 SAAYVSEIFRGGIMGVDKGQYEASMSLGIGYGDMMKDIIIPQAVKHILPSLVNEAIALLK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            SS+   +G  +L+     I   T +  E  L+   IY    ++++   +RL 
Sbjct: 160 ESSILSYIGAVELLRAADQITVLTFRFFEPYLVIAVIYYVFVMILSAVASRLE 212


>gi|146321731|ref|YP_001201442.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis 98HAH33]
 gi|253752541|ref|YP_003025682.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis SC84]
 gi|253754367|ref|YP_003027508.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|253756301|ref|YP_003029441.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|145692537|gb|ABP93042.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis 98HAH33]
 gi|251816830|emb|CAZ52475.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis SC84]
 gi|251818765|emb|CAZ56603.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|251820613|emb|CAR47371.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|292559150|gb|ADE32151.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis GZ1]
 gi|319758952|gb|ADV70894.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis JS14]
          Length = 521

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   +   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTV 491


>gi|66044327|ref|YP_234168.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63255034|gb|AAY36130.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 365

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|145630170|ref|ZP_01785952.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae R3021]
 gi|145636469|ref|ZP_01792137.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittHH]
 gi|148828241|ref|YP_001292994.1| ABC-type amino acid transport system permease [Haemophilus
           influenzae PittGG]
 gi|260581868|ref|ZP_05849664.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae NT127]
 gi|144984451|gb|EDJ91874.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae R3021]
 gi|145270294|gb|EDK10229.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittHH]
 gi|148719483|gb|ABR00611.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittGG]
 gi|260095061|gb|EEW78953.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae NT127]
 gi|309973450|gb|ADO96651.1| L-cystine ABC transporter, permease component TcyB [Haemophilus
           influenzae R2846]
          Length = 238

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I   + + +  P
Sbjct: 45  FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+
Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V     N T    E ILI
Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208

Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393
           +     IY     +++   +RL  +++
Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIRLS 235


>gi|320157819|ref|YP_004190198.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O]
 gi|319933131|gb|ADV87995.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 223

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 94/171 (54%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           TM+      VFS VL ++L+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TMEMAILGLVFSLVLAVILANI-----RVFRLPILDPLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    P++   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSVGMTTTQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|314936089|ref|ZP_07843436.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis subsp. hominis C80]
 gi|313654708|gb|EFS18453.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis subsp. hominis C80]
          Length = 484

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 57/80 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI R+G+ AV +GQ EAA  LGL + K  R ++LPQA+++I+P L ++
Sbjct: 359 IALVINSSAYIAEIFRAGINAVDKGQTEAAQCLGLNYSKTMRYIILPQAIKNILPALGNE 418

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 419 FVTLIKESSIVSTIGVGEIM 438



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 72  IDQGIVPYTSDSS----YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +D+       DSS    Y    + G  NT  ++  G++   ++G L+   +LS  KL++W
Sbjct: 259 MDKASKDMQDDSSFFDKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSW 318

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           I  +Y+E  R  P LV +F ++    +VL
Sbjct: 319 IASIYIEFLRGTPMLVQVFLVFFGTTAVL 347


>gi|258507568|ref|YP_003170319.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|257147495|emb|CAR86468.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259648917|dbj|BAI41079.1| ABC transporter permease component [Lactobacillus rhamnosus GG]
          Length = 237

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 33/190 (17%)

Query: 189 IFVFSFVLGIVLSLFA--TRLSRH-------------FHEKTGKALPLLYISTFLIFGLP 233
           I + SF +G++++L    TR+S               F+    ++ PLL     + FGLP
Sbjct: 23  IALVSFAIGLIIALVTALTRISVRKGVLIRIAKGIAVFYVWLFRSTPLLVQLFIVFFGLP 82

Query: 234 TLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           +L++  +  + +  D    G   F                 S  T A+ AE +R+ L+++
Sbjct: 83  SLIIPGIFPHGIKLDPVAAGIITF-----------------SLNTGAYCAETIRASLLSI 125

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA A+GL  R   R +++PQA+R+ IPPL++ +++L+K++SLA ++   ++  V
Sbjct: 126 DSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQV 185

Query: 353 GGTIINQTGQ 362
              I  +  Q
Sbjct: 186 SQQIAAENYQ 195


>gi|240102150|ref|YP_002958458.1| Amino acid ABC transporter, permease protein [Thermococcus
           gammatolerans EJ3]
 gi|239909703|gb|ACS32594.1| Amino acid ABC transporter, permease protein [Thermococcus
           gammatolerans EJ3]
          Length = 229

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 96/184 (52%), Gaps = 23/184 (12%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           +E T + +PLL I   + + +P L+                      G  +SP F++  +
Sbjct: 59  YEGTLRGIPLLAIYFVIFYSMPMLI----------------------GLGLSP-FLAAVV 95

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L   ++A+ ++I RSG+ AV  GQ+EAA++LG++  +  R ++LPQA+R  IP   ++Y
Sbjct: 96  GLGIRSSAYQSQIFRSGIQAVDEGQIEAALSLGMSQWQIIRHIVLPQALRMSIPAWMNEY 155

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK++S+A+A+G  +L      +++ T +      +    YL++ + +    N +  +
Sbjct: 156 VIVLKDTSIALALGIVELTRQATYLVSITAEPFRYYGLAALFYLAMVLPLTYLANWMGKR 215

Query: 392 IALK 395
             +K
Sbjct: 216 YGIK 219


>gi|237800639|ref|ZP_04589100.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331023498|gb|EGI03555.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 220

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    + +P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRALEQRLAIRR 220


>gi|52078834|ref|YP_077625.1| amino acid ABC transporter permease [Bacillus licheniformis ATCC
           14580]
 gi|52784205|ref|YP_090034.1| YckA [Bacillus licheniformis ATCC 14580]
 gi|319648872|ref|ZP_08003081.1| YckA protein [Bacillus sp. BT1B_CT2]
 gi|52002045|gb|AAU21987.1| Amino acid ABC transporter, permease protein YckA [Bacillus
           licheniformis ATCC 14580]
 gi|52346707|gb|AAU39341.1| YckA [Bacillus licheniformis ATCC 14580]
 gi|317388866|gb|EFV69684.1| YckA protein [Bacillus sp. BT1B_CT2]
          Length = 227

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 91/169 (53%), Gaps = 13/169 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           G+P LV++   + L+F  P +G QF  +  +          I  S  +AA+IAEI+RS L
Sbjct: 71  GVPILVIL---FILYFGFPYIGIQFTALAAAL---------IGFSINSAAYIAEIIRSAL 118

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V RGQ +AA ++G ++ +  R V++PQ++R  +PPL +  L+L+K SSLA  +   +L
Sbjct: 119 SSVDRGQWDAAKSVGFSYWQTMRHVIVPQSVRIALPPLANVMLDLVKASSLAAMITVPEL 178

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 +  +    + + ++   IY ++   IAL  + L  +  +  KK
Sbjct: 179 FQQAKIVGGREFDYMTMYILVALIYWAICSGIALLQDFLEKRTEVYIKK 227



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G  NT +++F+ M    I+G  +  GR+S   L+ W  R+Y+   R +P LV++F L
Sbjct: 22  VMQGIWNTLFISFASMFAGLILGFFIALGRMSGLALLRWPARIYISFMRGVPILVILFIL 81

Query: 149 Y 149
           Y
Sbjct: 82  Y 82


>gi|15604848|ref|NP_219632.1| amino acid ABC transporter ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|76788844|ref|YP_327930.1| GlnP [Chlamydia trachomatis A/HAR-13]
 gi|166154350|ref|YP_001654468.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 434/Bu]
 gi|166155225|ref|YP_001653480.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|237802559|ref|YP_002887753.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis B/Jali20/OT]
 gi|237804476|ref|YP_002888630.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255348491|ref|ZP_05380498.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 70]
 gi|255503033|ref|ZP_05381423.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 70s]
 gi|255506704|ref|ZP_05382343.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis D(s)2923]
 gi|301335603|ref|ZP_07223847.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis L2tet1]
 gi|3328528|gb|AAC67720.1| ABC Amino Acid Transporter Permease [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167374|gb|AAX50382.1| GlnP [Chlamydia trachomatis A/HAR-13]
 gi|165930338|emb|CAP03824.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 434/Bu]
 gi|165931213|emb|CAP06778.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|231272776|emb|CAX09682.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273793|emb|CAX10576.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis B/Jali20/OT]
 gi|289525171|emb|CBJ14645.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis Sweden2]
 gi|296434718|gb|ADH16896.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis E/150]
 gi|296435645|gb|ADH17819.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis G/9768]
 gi|296436568|gb|ADH18738.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis G/11222]
 gi|296437505|gb|ADH19666.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis G/11074]
 gi|296438436|gb|ADH20589.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis E/11023]
 gi|297140004|gb|ADH96762.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis G/9301]
 gi|297748258|gb|ADI50804.1| GlnP [Chlamydia trachomatis D-EC]
 gi|297749138|gb|ADI51816.1| GlnP [Chlamydia trachomatis D-LC]
          Length = 214

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 106/204 (51%), Gaps = 14/204 (6%)

Query: 189 IFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           I   S V G VL     T  SR+F  +  K L   Y+    + G P  + I + Y   F 
Sbjct: 21  ITAISLVCGFVLGWGIGTVNSRYFPCRISKFLGNFYVVA--VRGTPLFIQILIVY---FG 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L + N      +SP    L IAL+  +AA++AE VR+G+ A+P  Q EAA  LG T 
Sbjct: 76  LPSLIKVN------LSPLVAGL-IALTLNSAAYLAENVRAGINALPVQQWEAAKVLGYTG 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    +L PQ  ++I+P LT+++++L+K SS+ + VG  +L  V   I+ +    +E+ 
Sbjct: 129 PQIFLHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           LI   +YL ++   + F  RL+ K
Sbjct: 189 LICAGLYLIMTSAFSYFA-RLSEK 211


>gi|330962157|gb|EGH62417.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 365

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|255322521|ref|ZP_05363666.1| ABC transporter, permease protein [Campylobacter showae RM3277]
 gi|255300429|gb|EET79701.1| ABC transporter, permease protein [Campylobacter showae RM3277]
          Length = 236

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 71/105 (67%), Gaps = 5/105 (4%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +T S  F    IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL +  + R V+ PQA
Sbjct: 101 ATWSDNFYVALIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREVVFPQA 160

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            ++I+P L +++++L K +S+   VG+  ++ +  T+ +++ QA+
Sbjct: 161 TKNILPALANEFISLFKETSV---VGYISVIDI--TMQSKSLQAV 200


>gi|223039606|ref|ZP_03609893.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter rectus RM3267]
 gi|222879177|gb|EEF14271.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter rectus RM3267]
          Length = 236

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 71/105 (67%), Gaps = 5/105 (4%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +T S  F    IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL +  + R V+ PQA
Sbjct: 101 ATWSDNFYVALIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREVVFPQA 160

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            ++I+P L +++++L K +S+   VG+  ++ +  T+ +++ QA+
Sbjct: 161 TKNILPALANEFISLFKETSV---VGYISVIDI--TMQSKSLQAV 200


>gi|19745409|ref|NP_606545.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS8232]
 gi|19747518|gb|AAL97044.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS8232]
          Length = 522

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491


>gi|16273641|ref|NP_439236.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae Rd KW20]
 gi|260580164|ref|ZP_05847994.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae RdAW]
 gi|1074143|pir||H64181 ABC-type transport system probable membrane spanning protein -
           Haemophilus influenzae (strain Rd KW20)
 gi|260093448|gb|EEW77381.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae RdAW]
          Length = 238

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I   + + +  P
Sbjct: 45  FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+
Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V     N T    E ILI
Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208

Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393
           +     IY     +++   +RL  +++
Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIRLS 235


>gi|300856478|ref|YP_003781462.1| putative amino acid ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300436593|gb|ADK16360.1| predicted ABC-type aminoacid transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 212

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 19/201 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS  LG +++L   ++S+    K  KA+  LY  T+   G P L+ +   Y   F  PV
Sbjct: 27  IFSIPLGCLVAL--GKISKI---KPIKAVLSLY--TWAFRGTPLLLQLFFTY---FGLPV 76

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +SP   +  IA +   AA++AEI RSG+ ++ +GQ EA+  LG+ + + 
Sbjct: 77  IG-------IRLSP-LAAASIAFTINYAAYLAEIFRSGIESIDKGQFEASKVLGMNYCQT 128

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              +++PQA+R++IPP+ ++ +NL+K+S+L   +G  DL+     ++ +    I   +I 
Sbjct: 129 MIKIIIPQAIRNVIPPVCNESINLIKDSALVATIGVGDLLRAAKEVVTR-DFTITPFIIA 187

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
             +YL L+ ++ +   +L  K
Sbjct: 188 AILYLILTSVLVMAFRKLEKK 208


>gi|251790087|ref|YP_003004808.1| glutamine ABC transporter permease protein [Dickeya zeae Ech1591]
 gi|247538708|gb|ACT07329.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 219

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 77/128 (60%), Gaps = 4/128 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 90  FSAAVVTIMINSGAYIAEITRGSVLSIHKGFTEAGLALGLSRRDTLRHVIAPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI----ILIWMFIYLSLSIMI 381
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI     +I++ I L+LS+++
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLVITLALSMVL 209

Query: 382 ALFMNRLN 389
                RL 
Sbjct: 210 RWLERRLK 217


>gi|227534279|ref|ZP_03964328.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227188071|gb|EEI68138.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 237

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 94/186 (50%), Gaps = 33/186 (17%)

Query: 193 SFVLGIVLSLFA--TRLS-------------RHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           SF +G++++L    TR+S               F+    ++ PLL     + FGLP+L++
Sbjct: 27  SFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVFFGLPSLII 86

Query: 238 IAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             +  + +  D  V G   F                 S  T A+ AE +R+ L+++  GQ
Sbjct: 87  PGIFPHGIKLDPVVAGIITF-----------------SLNTGAYCAETIRAALLSIDHGQ 129

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ++GL  R   R +++PQA+R+ +PPL++ +++L+K++SLA ++   ++  V   I
Sbjct: 130 WEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQVSQQI 189

Query: 357 INQTGQ 362
             +  Q
Sbjct: 190 AAENYQ 195


>gi|94994195|ref|YP_602293.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS10750]
 gi|94547703|gb|ABF37749.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS10750]
          Length = 216

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|219670551|ref|YP_002460986.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219540811|gb|ACL22550.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 219

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 109/215 (50%), Gaps = 30/215 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALKY 242
           V S  LG++LSL   R+SR    ++         +  PL+    F+ FGLP +       
Sbjct: 27  VMSVPLGLMLSL--GRISRFGVLRSAIGVYIWVFRGTPLMLQLLFVYFGLPFI------- 77

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 PV+G+        +  +F +  +A     AA+ AEI R+G+ ++ RGQ E A A
Sbjct: 78  ------PVIGEI------LILTDFQAAILAFVLNYAAYFAEIFRAGIQSIERGQYEGARA 125

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T+ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   DL+     ++ +   
Sbjct: 126 LGMTYGQLMRRIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMNDLLRTTRALVQRDFT 185

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I+  +F YL +++++     RL  + A  ++
Sbjct: 186 MTPFIVAGVF-YLLMTLVLTWGFQRLEKRYAAYDE 219


>gi|326204746|ref|ZP_08194601.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
 gi|325985117|gb|EGD45958.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
          Length = 387

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 3/116 (2%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+G        + + I  + + AA++AE VR G+  +P+GQ EAA ALGL + +    V+
Sbjct: 243 FLGNGLELNNVLRVMIGFTLFNAAYVAETVRGGMQIIPQGQYEAAQALGLNYVQRITFVI 302

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIIL 368
           +PQA+RS++P L    + + K++SL   V   DL+ +   ++      G+ +E+ L
Sbjct: 303 MPQALRSVVPALVGSVIEVFKDTSLVAIVSLMDLLGIAKRVVANPQFLGRQMEVFL 358



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           GF+ T  +A   ++ +  IG L+  GR S   ++ W C +Y+EV R +P + V+F
Sbjct: 180 GFLLTVLIAVVDIVLSFPIGVLLALGRRSKLVVIRWFCIIYIEVIRGVPLITVLF 234


>gi|241758722|ref|ZP_04756835.1| L-cystine transport system permease protein TcyB [Neisseria
           flavescens SK114]
 gi|241320930|gb|EER57143.1| L-cystine transport system permease protein TcyB [Neisseria
           flavescens SK114]
          Length = 238

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|154175001|ref|YP_001409167.1| putative ABC transporter permease protein [Campylobacter curvus
           525.92]
 gi|112802173|gb|EAT99517.1| putative ABC transporter, permease protein [Campylobacter curvus
           525.92]
          Length = 228

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 72/119 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA S    A+ +E VR+ +++VP+GQ EAA +LG++H +    ++ PQA+R  +PPL++ 
Sbjct: 103 IAFSLNVGAYASESVRASILSVPKGQWEAATSLGMSHAQILHRIIAPQAVRISLPPLSNT 162

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ L+K++SLA ++   D+  V   I  +T + + + ++   IYL +  ++     +L 
Sbjct: 163 FIGLVKDTSLAASITMVDMFMVAQRIAARTFEPLVLYVLAALIYLVVCTLLTFLQAKLE 221


>gi|116254531|ref|YP_770367.1| putative ABC transporter permease component [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259179|emb|CAK10297.1| putative ABC transporter permease component [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 216

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 26/170 (15%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQLHFDKP 249
           VF   LG+V SL  +RL R          P+ +Y+   +I G P L+ I   + ++F  P
Sbjct: 34  VFGIALGLV-SLAQSRLIRT---------PVAIYVD--VIRGTPLLIQI---FFVYFVLP 78

Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             G  FN         EF +   AL    AAFIAE VR  + ++ +GQ EAA ++G+   
Sbjct: 79  GFGIGFN---------EFWAGVTALGLNGAAFIAETVRGAVGSIEKGQSEAARSIGMREH 129

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +    +LLPQA+R I+PP T++ +NL KN+SL  A+   +L   G +I++
Sbjct: 130 QTLIWILLPQALRQIVPPTTNEVINLTKNTSLLSAISVFELTRSGQSIVS 179


>gi|71910050|ref|YP_281600.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS5005]
 gi|71852832|gb|AAZ50855.1| ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS5005]
          Length = 522

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491


>gi|288555160|ref|YP_003427095.1| glutamine ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288546320|gb|ADC50203.1| glutamine ABC transporter permease [Bacillus pseudofirmus OF4]
          Length = 220

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA++    A+IAEIVR  + ++ +GQ EA  +LGL+  +  R ++ PQA+R +IPPL +Q
Sbjct: 97  IAIALNAGAYIAEIVRGSVESIEKGQREAGRSLGLSSSQTMRYIIWPQALRRMIPPLGNQ 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK++SL   +   +L+  G    + T    E  L+   +YL ++I  ++F+ R+  
Sbjct: 157 FIISLKDTSLFSVIAVGELLYQGRQYASATFTYFEPYLMVCVLYLMITIPASVFLRRVER 216

Query: 391 KI 392
           ++
Sbjct: 217 RL 218



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 25/41 (60%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +IG  +G  R+S NK +  I  VYVEV R  P LV I F+Y
Sbjct: 38  VIGAFIGLARVSKNKFIYGIATVYVEVIRGTPILVQILFIY 78


>gi|288961662|ref|YP_003451972.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913942|dbj|BAI75428.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 226

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 104/200 (52%), Gaps = 14/200 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+++ L A  + R F      A    Y+  ++I G P LV + L +          
Sbjct: 30  SFALGLIVGLVAA-VVRLFGPAPLAAAVRFYV--WIIRGTPLLVQLFLIF---------- 76

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            +       V   F +  I  +   +A+ +EI+R+ + +VP+GQ EAA ++G++  +A R
Sbjct: 77  -YGLPSAGIVLDAFPAALIGFTLNVSAYTSEIIRAVIGSVPKGQWEAAYSIGMSWPQAMR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  + + + + +    
Sbjct: 136 RTILPQAARVAVPPLSNSFISLVKDTSLAAAITVPELFQAAQRIVATSYEPLILYVEAAL 195

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           IYL LS +++    RL  ++
Sbjct: 196 IYLVLSSVLSALQVRLERRL 215


>gi|209546328|ref|YP_002278218.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539185|gb|ACI59118.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 213

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ I L+ + +A++ EI R  + AVPRGQ EAA AL L +    R V+LPQA+R  +P
Sbjct: 82  WVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYVSRMRDVILPQALRISLP 141

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  VGF +L   G  I NQ  Q + +  +   +Y  +   + +  
Sbjct: 142 ATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGVVGILYFLMCCPLTILG 201

Query: 386 NRLNAKIALKEK 397
            RL  K A   +
Sbjct: 202 ARLERKFAASAR 213


>gi|169829526|ref|YP_001699684.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168994014|gb|ACA41554.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 235

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 11/169 (6%)

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           FGLP LV             V+  F+    S+  P    + +A +    A+ +EI+RSG+
Sbjct: 76  FGLPMLV-----------DGVVNTFHLSFQSSSIPILFFVILAFTFSAGAYASEIIRSGI 124

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++VP+GQ+EAA A+GLT  +A R  +LPQA    IP  T+ ++  L  +SLA  +   +L
Sbjct: 125 LSVPKGQLEAAYAIGLTFTQAMRRYVLPQAFGKSIPNFTNVFIGFLHATSLAFFLSIKEL 184

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             V   + +   + +E  +    IY  +SI+     +R+  ++    K 
Sbjct: 185 TGVANIVASVNLKFLEAFIAVGIIYWGISIITESISHRIEKRVMAYSKS 233


>gi|330969252|gb|EGH69318.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 365

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|306827502|ref|ZP_07460785.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|304430300|gb|EFM33326.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 216

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  
Sbjct: 85  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYGLMVKKIILPQAFRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 145 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 204

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 205 YQEFLENKLAL 215


>gi|184199755|ref|YP_001853962.1| putative amino acid ABC transporter permease protein [Kocuria
           rhizophila DC2201]
 gi|183579985|dbj|BAG28456.1| putative amino acid ABC transporter permease protein [Kocuria
           rhizophila DC2201]
          Length = 224

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 14/173 (8%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           PL +IS F ++   G P LV +   + + +  P         G T+S  + S  +A +  
Sbjct: 51  PLQWISRFYVWLFRGTPILVQL---FIIFYGLPA-------AGITLS-AWTSAILAFTLN 99

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+ AE +R+ + ++PRGQ+EAA  L  T  +  R V+ PQA+R  +PPL +  ++L+K
Sbjct: 100 TGAYAAETLRASVQSIPRGQLEAARTLNYTGWQTVRHVVAPQALRIALPPLGNDLIDLVK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +SL + +  AD+  VG  I     Q + +      IYL++  +++L  +RL 
Sbjct: 160 GTSLVMVITLADVFQVGRQIAATNFQPLALYAEVAVIYLAIFTVLSLLQSRLE 212


>gi|159904733|ref|YP_001548395.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C6]
 gi|159886226|gb|ABX01163.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C6]
          Length = 219

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 13/190 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           KI + SF+L +++++    +      KT   + ++Y+  F   G P L+      QL F 
Sbjct: 22  KITIMSFLLAVIIAVLVGSVRAMNFSKTLNLVLMVYVEVFR--GTPLLI------QLFFI 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              L     +  ST +       + LS    A+I+EI+R+ + +VP GQ EAA +LG++ 
Sbjct: 74  YYGLPSVGIVMSSTFAA-----VLGLSLNGGAYISEIMRAAIQSVPVGQFEAAESLGMSK 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++   ++LPQA R  +P L + +  LLK SSL   +   +L  +G  I  +T +  EI 
Sbjct: 129 IESMIYIVLPQAFRITVPSLVNSFSALLKESSLISVLAITELTRIGQLIYTKTSRPFEIY 188

Query: 368 LIWMFIYLSL 377
           L    IYL L
Sbjct: 189 LTIGLIYLVL 198



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 107 ATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           A II  LVG+ R ++ +K +  +  VYVEVFR  P L+ +FF+Y  + SV  +   +   
Sbjct: 31  AVIIAVLVGSVRAMNFSKTLNLVLMVYVEVFRGTPLLIQLFFIYYGLPSVGIVMSSTFAA 90

Query: 166 PFGMFLNN 173
             G+ LN 
Sbjct: 91  VLGLSLNG 98


>gi|27382710|ref|NP_774239.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27355882|dbj|BAC52864.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 243

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 75/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I +  + +A +A  +++G+ ++PRGQ  AA ALGLT  +  R VLLP A R I+P
Sbjct: 108 FWTAAIGIGFFMSARVAVQLQAGIGSLPRGQKMAATALGLTTVQGYRYVLLPMAFRIILP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS++LN +KN+++A+ +G  +L     ++   + Q  E       +YL ++ ++   M
Sbjct: 168 PLTSEFLNTIKNTAVAITIGLIELTGQARSMQEFSFQVFEAFTAATILYLLVNAVVVTAM 227

Query: 386 NRLNAKIAL 394
             L   +A+
Sbjct: 228 RFLERYVAI 236


>gi|225867875|ref|YP_002743823.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225701151|emb|CAW98036.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
          Length = 522

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRQIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491


>gi|153011394|ref|YP_001372608.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563282|gb|ABS16779.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 218

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 72/119 (60%), Gaps = 1/119 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP  M+ +I L+ Y AAF AEI+R G++++  GQ +A  A+G+   +    ++LPQ
Sbjct: 85  GFEISPA-MAAFITLTFYGAAFYAEIIRGGIVSIDAGQWDAGRAIGMRRGQLMGKIILPQ 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           A+R ++PPL +Q +  LKN+SL   +   DL+  G  + + T + +E   +   +YL++
Sbjct: 144 ALRRMVPPLVNQSVLQLKNTSLLSVLAVPDLLYQGQLVTSATYRPLETYTLIAVLYLAV 202


>gi|229553604|ref|ZP_04442329.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus rhamnosus LMS2-1]
 gi|258538745|ref|YP_003173244.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|229313024|gb|EEN78997.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus rhamnosus LMS2-1]
 gi|257150421|emb|CAR89393.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 237

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 33/190 (17%)

Query: 189 IFVFSFVLGIVLSLFA--TRLS--RHFHEKTGKALPLLYISTF-----------LIFGLP 233
           I + SF +G++++L    TR+S  +    +  K + + Y+  F           + FGLP
Sbjct: 23  IALVSFAIGLIIALVTALTRISVRKGILIRIAKGIAVFYVWLFRSTPLLVQLFIVFFGLP 82

Query: 234 TLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           +L++  +  + +  D    G   F                 S  T A+ AE +R+ L+++
Sbjct: 83  SLIIPGIFPHGIKLDPVAAGIITF-----------------SLNTGAYCAETIRASLLSI 125

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA A+GL  R   R +++PQA+R+ IPPL++ +++L+K++SLA ++   ++  V
Sbjct: 126 DSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQV 185

Query: 353 GGTIINQTGQ 362
              I  +  Q
Sbjct: 186 SQQIAAENYQ 195


>gi|191637481|ref|YP_001986647.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei BL23]
 gi|239629529|ref|ZP_04672560.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|190711783|emb|CAQ65789.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei BL23]
 gi|239528215|gb|EEQ67216.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327381526|gb|AEA53002.1| Polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus casei LC2W]
 gi|327384689|gb|AEA56163.1| Polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus casei BD-II]
          Length = 237

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 33/190 (17%)

Query: 189 IFVFSFVLGIVLSLFA--TRLS-------------RHFHEKTGKALPLLYISTFLIFGLP 233
           I + SF +G++++L    TR+S               F+    ++ PLL     + FGLP
Sbjct: 23  IALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVFFGLP 82

Query: 234 TLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           +L++  +  + +  D  V G   F                 S  T A+ AE +R+ L+++
Sbjct: 83  SLIIPGIFPHGIKLDPVVAGIITF-----------------SLNTGAYCAETIRAALLSI 125

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA ++GL  R   R +++PQA+R+ +PPL++ +++L+K++SLA ++   ++  V
Sbjct: 126 DHGQWEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQV 185

Query: 353 GGTIINQTGQ 362
              I  +  Q
Sbjct: 186 SQQIAAENYQ 195


>gi|78358782|ref|YP_390231.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78221187|gb|ABB40536.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 217

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  +  A+IAEI R  + ++  GQMEAA +LG+++ +A   ++LPQA++  IPPL +Q
Sbjct: 92  LALGIHNGAYIAEIFRGAISSISTGQMEAARSLGMSYPRAMVRIILPQALKRAIPPLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSLA  +   +L+     + +     +E++ I    YL  + + +   +RL A
Sbjct: 152 FIIALKDSSLASTITINELLLKSQQLASSNFMMMEMLAIAALFYLLYTAVFSWLFHRLEA 211

Query: 391 KI 392
           K+
Sbjct: 212 KL 213


>gi|152974512|ref|YP_001374029.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152023264|gb|ABS21034.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 232

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 36/168 (21%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST----------FLIF-GLP 233
           T   + + +F++G++L+   T L+R  + +  + +  +Y+S           FLIF GLP
Sbjct: 33  TTIPLTIITFIIGLILATL-TALARISNSRILQWIARIYVSIIRGTPLLVQLFLIFYGLP 91

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL       Q+  D                  + +  I  S    A+ +EI+R+ ++++P
Sbjct: 92  TL-------QIEIDP-----------------YTAAVIGFSLNVGAYASEIIRASILSIP 127

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +GQ EAA  +G+T+ +A + ++LPQA R  IPPL++ +++L+K++SLA
Sbjct: 128 KGQWEAAYTMGMTYTQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 175



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 47  ILATLTALARISNSRILQWIARIYVSIIRGTPLLVQLFLIF 87


>gi|158423549|ref|YP_001524841.1| glutamate/aspartate transport system permease protein 1
           [Azorhizobium caulinodans ORS 571]
 gi|158330438|dbj|BAF87923.1| glutamate/aspartate transport system permease protein 1
           [Azorhizobium caulinodans ORS 571]
          Length = 230

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 4/132 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  ++ + + AA+  EI+R G+ ++ RGQ+ A +ALGLT R+    V+LPQA+R++ P
Sbjct: 100 FRSALVSFTLFEAAYFCEIIRGGIQSIRRGQISAGLALGLTRRQTFLKVVLPQAIRNMTP 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++ + L +++SL   VG  D +     +  + G+  E  +    +YL    +I    
Sbjct: 160 SLLTRLIVLFQDTSLVYVVGLTDFLGAASKVGARDGRLTEFYVFVAVVYL----VICFAA 215

Query: 386 NRLNAKIALKEK 397
           +RL  ++ L+ K
Sbjct: 216 SRLVKRLELRWK 227


>gi|16119458|ref|NP_396164.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15161996|gb|AAK90605.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 222

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   SP   S+ +ALS Y  A+ +EI+RSGL ++P  Q+EA + LGLT  +    ++LP 
Sbjct: 83  GLKFSPIHASI-VALSIYFGAYASEILRSGLNSIPPSQIEAGVCLGLTRWQVLSRIVLPP 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+I P +TSQ++ LL  +S+A  V   +L    G I ++T ++ E+  +   IY +L 
Sbjct: 142 AIRNIYPSMTSQFVLLLLGTSIASQVSTDELFHAAGFIDSRTYRSFEVYALTCGIYFTLV 201

Query: 379 I 379
           +
Sbjct: 202 V 202


>gi|328944592|gb|EGG38753.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 230

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P LT+  LNL+++
Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALPNLTTALLNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E       IY  ++++++L    L   + +K
Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTALALIYWGIALVVSLVSQLLEKSLTVK 228

Query: 396 EK 397
           E+
Sbjct: 229 ER 230


>gi|329910725|ref|ZP_08275366.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546105|gb|EGF31168.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 221

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 76/124 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + A ++AE+ R+GL +VPRGQ EAA A+ L      R ++LPQA+R I+P L + 
Sbjct: 97  VGLALHYACYVAEVYRAGLDSVPRGQWEAAKAMSLGPWNVYRSIVLPQAIRPIVPALGNY 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K++ +  A+   +L+     I +Q+ + IE I +    +L +S+++AL + RL A
Sbjct: 157 LIAMFKDTPVLSAITVVELMLQAKNIGSQSFRYIEPITLTGIFFLLISLVVALLVRRLEA 216

Query: 391 KIAL 394
           ++ +
Sbjct: 217 QLRM 220


>gi|242280378|ref|YP_002992507.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123272|gb|ACS80968.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 367

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 59/83 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++ + +A++AE +R GL  + +GQ EAA ALG+++ K T +V+LPQA+R +IPP+ + 
Sbjct: 238 VGITMFFSAYLAENIRGGLQGISKGQYEAADALGMSYWKKTIVVILPQALRIVIPPMVNN 297

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
           ++ +LK++SL   VG  DL+ + 
Sbjct: 298 FIGILKDTSLVGIVGLVDLLQIA 320


>gi|55820684|ref|YP_139126.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55822575|ref|YP_141016.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55736669|gb|AAV60311.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55738560|gb|AAV62201.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 227

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 15/161 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250
           F  +LG+++SL     ++    K  + L  LY+  F   G P +V I + + L H + P 
Sbjct: 31  FGTILGVLVSL-----AKRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 83

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + QF  +    S + P      I LS  + A+I+E VR+G+ ++P+GQ+EAA +LG+   
Sbjct: 84  V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQIEAAYSLGIRPW 138

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
              R V+LPQA+++I+P L ++++ ++K+SSL   +G  +L
Sbjct: 139 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 179


>gi|307312879|ref|ZP_07592508.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306899393|gb|EFN30026.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 228

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 30/209 (14%)

Query: 196 LGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           LGI  ++ +T      RL    H +  +  PLL     + FGLP +              
Sbjct: 38  LGIFCAVMSTSSSPIPRLLVRLHVEVVRNTPLLVQIFVIFFGLPNI-------------- 83

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                    G  +SP   S++IAL      ++AEIVR G+ A  R Q+EAA +LGL++ +
Sbjct: 84  ---------GIRLSP-LTSVFIALVLNNGGYVAEIVRGGIEATHRSQVEAAESLGLSYFQ 133

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LP A+  +  P+ SQ + L+ ++SL  A+G  DL        ++T + +EI L+
Sbjct: 134 TLRYVILPPALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAMIASSETFRTMEIYLV 193

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +Y+ L+ +    +N     I  + ++
Sbjct: 194 VAMVYVVLNFVFRAVLNVAGLMIFTRSRR 222


>gi|269219463|ref|ZP_06163317.1| ABC amino acid transporter, permease component [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269211042|gb|EEZ77382.1| ABC amino acid transporter, permease component [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 372

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 75/125 (60%), Gaps = 1/125 (0%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  + L     A+++EI+RSGL +V +GQ EAA ALG++ R+    +++PQAMR I+PP
Sbjct: 203 VSAIVGLGLNEGAYLSEIIRSGLNSVDKGQEEAAQALGMSPRQILYRIIIPQAMRVIVPP 262

Query: 327 LTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             ++ +++LK +SL  AV F  +L  V     +QT   I  +++    YL ++ ++ +  
Sbjct: 263 TGNETISMLKTTSLVTAVPFTFELTKVATDYGSQTLLPIPFLVVAAIWYLVITSVLMIGQ 322

Query: 386 NRLNA 390
            RL A
Sbjct: 323 ARLEA 327


>gi|261822131|ref|YP_003260237.1| glutamine ABC transporter permease [Pectobacterium wasabiae WPP163]
 gi|261606144|gb|ACX88630.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 219

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++  G  EA +ALGL+     R V+ P A+R ++P
Sbjct: 90  FAAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFIL 209

Query: 386 NRLNAKIAL 394
            RL  ++ +
Sbjct: 210 RRLERRLKI 218


>gi|269214011|ref|ZP_05983392.2| L-cystine ABC transporter, permease protein [Neisseria cinerea ATCC
           14685]
 gi|269144798|gb|EEZ71216.1| L-cystine ABC transporter, permease protein [Neisseria cinerea ATCC
           14685]
          Length = 227

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEE 219

Query: 391 K 391
           +
Sbjct: 220 R 220


>gi|150376684|ref|YP_001313280.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150031231|gb|ABR63347.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 220

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 75/127 (59%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  + L+ Y+ A++AE+ R GLIA+P GQ EA +A+GLT  +    + +P  +RS++P L
Sbjct: 92  SFVLTLAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLTEMQIRTSITIPLMLRSVLPSL 151

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            S  ++L K++SLA A+   +L      I  ++ + IE  ++   +Y++   ++A  M  
Sbjct: 152 GSTIISLFKDTSLAAAIAVPELTFEARKINVESFRVIETWIVASCLYVATCSLLAALMRG 211

Query: 388 LNAKIAL 394
           +  ++A+
Sbjct: 212 VERRLAV 218


>gi|145638107|ref|ZP_01793717.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittII]
 gi|145272436|gb|EDK12343.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittII]
 gi|309751273|gb|ADO81257.1| L-cystine ABC transporter, permease component TcyB [Haemophilus
           influenzae R2866]
          Length = 238

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I   + + +  P
Sbjct: 45  FFCGLLIAVIVAVIRTFPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+
Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V     N T    E ILI
Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208

Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393
           +     IY     +++   +RL  +++
Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIRLS 235


>gi|237799857|ref|ZP_04588318.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022712|gb|EGI02769.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 365

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|225075327|ref|ZP_03718526.1| hypothetical protein NEIFLAOT_00330 [Neisseria flavescens
           NRL30031/H210]
 gi|224953502|gb|EEG34711.1| hypothetical protein NEIFLAOT_00330 [Neisseria flavescens
           NRL30031/H210]
          Length = 238

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|209544208|ref|YP_002276437.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531885|gb|ACI51822.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 499

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 64/91 (70%), Gaps = 1/91 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP F++  +AL    AA+ AE  R+GL +V RGQ+EAA+AL +TH +A R V++PQ
Sbjct: 357 GLRLSP-FVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTHMQALRFVVVPQ 415

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A+R +IP +T+ +++LLK+SSL   +   +L
Sbjct: 416 AVRMVIPVMTNDFISLLKDSSLVSVITLTEL 446


>gi|330814054|ref|YP_004358293.1| glutamate Aspartate transport system permease protein GltK
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487149|gb|AEA81554.1| glutamate Aspartate transport system permease protein GltK
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 347

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 66/97 (68%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + + + IA++ + +A+IAE+VR GL A+PRGQ +AA ++G+ + K+  L++
Sbjct: 204 FLPSGTNLDKLIRVIIAITLFESAYIAEVVRGGLQAIPRGQYDAANSIGMGYWKSHLLII 263

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           LPQA++ +IP + + ++ L K++ L + VG  +L+ +
Sbjct: 264 LPQALKIVIPGVANTFIALFKDTPLILVVGLMELLGM 300


>gi|195978808|ref|YP_002124052.1| amino acid ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225871211|ref|YP_002747158.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
 gi|195975513|gb|ACG63039.1| amino acid ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225700615|emb|CAW95155.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
          Length = 522

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRQIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491


>gi|83592338|ref|YP_426090.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575252|gb|ABC21803.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 365

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 79/131 (60%), Gaps = 3/131 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE++R GL A+PRGQ EAA ALGL   ++T L++LPQA++ +IP + + 
Sbjct: 235 IGITLFQSAYMAEVIRGGLQAIPRGQFEAASALGLGFWRSTGLIILPQALKLVIPGVVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLV-SVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNR 387
           ++ L K+++L + +G  D++ +V   I++      A+E  +   F +      ++ +   
Sbjct: 295 FIALFKDTTLVLIIGLLDILGTVQSAIVDPAWSRVAVEGYIFAGFCFWIFCFGMSRYSQA 354

Query: 388 LNAKIALKEKK 398
           L +K+    +K
Sbjct: 355 LESKLHTGHRK 365


>gi|326333120|ref|ZP_08199369.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
 gi|325949103|gb|EGD41194.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
          Length = 322

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 139/289 (48%), Gaps = 28/289 (9%)

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           L+GA  ++  K   WI  V V        L+V+  + KS+++    P +   +    FL 
Sbjct: 21  LLGARLVARRKPGQWISAVLV--------LLVVAGIVKSLVTN---PRYHWDVVGAFFLR 69

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    LT+   A + V S++LGIVL++   RLS +    +  A+   YI  F    +
Sbjct: 70  PSILDGLVLTLWLTAAVLVSSYLLGIVLAVM--RLSTNPVLSSVSAV---YIWFFR--SV 122

Query: 233 PTLV-------LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           P L+       + +L  Q+    P L  F  I  + +    ++ ++ L+   AAF AEI+
Sbjct: 123 PPLLQLLFWFQMASLYPQISLGIPFLKPFVTIETAHLFSGLLAAFVGLTFDIAAFAAEII 182

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL++V  GQ EAA ALGL+  +    ++LPQAM +IIP   +  + LLK +S+   + 
Sbjct: 183 RGGLVSVEAGQTEAAKALGLSKARIFWRIVLPQAMPAIIPASGNLLIGLLKGTSIVSVIA 242

Query: 346 FADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
             DL+     I  Q    I ++L   IW  I +++   I  F+ R  A+
Sbjct: 243 VQDLLYSVQLIYAQNYLVIPLLLVATIWYLILVTVLSTIQFFVERYYAR 291



 Score = 43.1 bits (100), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 40/63 (63%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           +IL G V T WL  + ++ + ++G ++   RLS N +++ +  VY+  FR++PPL+ + F
Sbjct: 71  SILDGLVLTLWLTAAVLVSSYLLGIVLAVMRLSTNPVLSSVSAVYIWFFRSVPPLLQLLF 130

Query: 148 LYK 150
            ++
Sbjct: 131 WFQ 133


>gi|325125097|gb|ADY84427.1| Amino acid ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 247

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 9/199 (4%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+LG++++L  T L R   +K G  L +  I  F ++   +  L+   + ++F  P 
Sbjct: 37  IISFILGLIIAL-VTALVR-ISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVYFGLPY 94

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L     +        F +  I  S  T A+ +E +R+ + +VPR Q EAA ++G+   K 
Sbjct: 95  LKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIGMNRGKT 154

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA++  IPPL++ ++ L+K++SLA ++   ++  V   I  +  Q        
Sbjct: 155 LRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQP------- 207

Query: 371 MFIYLSLSIMIALFMNRLN 389
           + +Y  ++++ ALF + L+
Sbjct: 208 LIMYSLVALVYALFCSVLS 226


>gi|22127991|ref|NP_671414.1| amino acid ABC transport system permease [Yersinia pestis KIM 10]
 gi|21961137|gb|AAM87665.1|AE014013_10 putative amino acid ABC transport system permease [Yersinia pestis
           KIM 10]
          Length = 269

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 11/216 (5%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   V S + G+  ++  T L        G    +L     L   +P ++
Sbjct: 35  TFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGLFRAIPVIM 94

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+  GQ
Sbjct: 95  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIMAIGAGQ 144

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 145 WQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQV 204

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            N++    +E+ L    +Y  L + + L  N LN +
Sbjct: 205 NNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR 240


>gi|21909739|ref|NP_664007.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS315]
 gi|28895121|ref|NP_801471.1| glutamine-binding periplasmic protein [Streptococcus pyogenes
           SSI-1]
 gi|21903923|gb|AAM78810.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS315]
 gi|28810366|dbj|BAC63304.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes SSI-1]
          Length = 522

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491


>gi|302188402|ref|ZP_07265075.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 365

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|293606724|ref|ZP_06689077.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292814874|gb|EFF74002.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 229

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 57/84 (67%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +++LS YT+ +++EIV   + +VPRGQ E A+ LGL   +  RLV+LPQAMR I+ P++ 
Sbjct: 96  FVSLSVYTSCYVSEIVMGAIQSVPRGQTEGAMTLGLRPLQILRLVVLPQAMRLIVQPMSG 155

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
            Y+ L+K++++   VG  +L   G
Sbjct: 156 VYVMLIKSTAILSVVGITELTRQG 179


>gi|86742203|ref|YP_482603.1| amino acid ABC transporter permease [Frankia sp. CcI3]
 gi|86569065|gb|ABD12874.1| amino acid ABC transporter membrane protein 1, PAAT family [Frankia
           sp. CcI3]
          Length = 189

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 8/129 (6%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS Y AA + E VRSG+  V  GQ EAA ALGLT  +  R+++LPQA R+++ PL S 
Sbjct: 63  VALSIYHAALVCEAVRSGINGVDLGQAEAARALGLTFSQTLRMIILPQAFRNVLQPLGSV 122

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
              L++N+S+A A G  +L  +   +      A I ++L  +  YL L++++A       
Sbjct: 123 VSALIRNTSIAAAFGVQELTGMVQRLTTANPDAVIAVLLGGVVAYLILTVVLA------- 175

Query: 390 AKIALKEKK 398
           A ++L E++
Sbjct: 176 AGLSLAERR 184


>gi|241759139|ref|ZP_04757247.1| ArtM protein [Neisseria flavescens SK114]
 gi|241320558|gb|EER56835.1| ArtM protein [Neisseria flavescens SK114]
          Length = 219

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  
Sbjct: 92  ALVFLGASYMAEAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANV 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+  AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +
Sbjct: 152 LFLMKETSVVSAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211

Query: 392 I 392
           I
Sbjct: 212 I 212


>gi|157369428|ref|YP_001477417.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157321192|gb|ABV40289.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 295

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 5/136 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    + L+   +A+ AEI+R G+I V  GQ EAA ALGL   + T  ++LPQA+RSII
Sbjct: 146 QFSVAVLGLTLVQSAYTAEIIRGGIIGVEYGQHEAAAALGLPGYRRTFRIILPQALRSII 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIM 380
           P   ++ ++L K +S+   +   +L      I N+T Q I ++++    ++FI  +LS+ 
Sbjct: 206 PTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNRTQQVIPLLMVATVWYLFITTALSV- 264

Query: 381 IALFMNRLNAKIALKE 396
           I  ++ R  A+ A++E
Sbjct: 265 IQYYIERYFARGAVRE 280


>gi|261823410|ref|YP_003261516.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607423|gb|ACX89909.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 223

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 117/221 (52%), Gaps = 21/221 (9%)

Query: 178 FPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           FP + M     +F+      F+ VLG++L+L      R         +  LYIS F   G
Sbjct: 12  FPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVAVVKIVELYISLFR--G 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P+LV +   + ++F  P L    F   S +     ++ I  S  T+A++AEI R+GL +
Sbjct: 65  IPSLVQL---FIIYFGLPQL----FPSLSNLDAMTAAI-IGFSLKTSAYMAEIFRAGLAS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+G ++L +
Sbjct: 117 VDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFA 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  I  ++ +  E  L+   IY  + ++ A    +L  K+
Sbjct: 177 EGKMIAAESLRFFETFLVVGLIYWMVIVVYAWLQKQLEKKL 217


>gi|238797859|ref|ZP_04641351.1| ABC-type amino acid transport system permease component [Yersinia
           mollaretii ATCC 43969]
 gi|238718275|gb|EEQ10099.1| ABC-type amino acid transport system permease component [Yersinia
           mollaretii ATCC 43969]
          Length = 254

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+  ++A++A  V++G++A+  GQ +A ++LG    +    V+LPQA+R +
Sbjct: 94  PEITTVVCALALISSAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213

Query: 383 LFMNRLNAK 391
           L  N LN +
Sbjct: 214 LLANGLNRR 222


>gi|239816642|ref|YP_002945552.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239803219|gb|ACS20286.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 217

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AF+ EI R  + A+P+GQ EA+ +L L+  +  R V+LPQA++  I P    
Sbjct: 91  VALTLYTSAFLTEIWRGCVAAIPKGQWEASGSLALSFSEQMRHVILPQAVKIAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K ++LA  +GF +L   G  I N T Q   +      +Y  L   ++L+   L  
Sbjct: 151 LVQVIKGTALASVIGFVELTKAGSMISNATFQPFVVFSCVALLYFVLCFPVSLYAKNLER 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|238784129|ref|ZP_04628143.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
 gi|238714975|gb|EEQ06973.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
          Length = 219

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 18/176 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F +G+V+ L  +  SR      G+    +YIS F   G P L  + L + L  +   
Sbjct: 31  VAGFFIGVVIYLMESGRSRF-----GRGFAQVYISLFR--GTPVLAQVLLCFYLPGE--- 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +G S   P +++  +AL+  TAA+ ++I+RSG  A+P GQ+EAA   GL+ R+ 
Sbjct: 81  ------LGVSL--PGYLAAVLALTLNTAAYQSQILRSGFAAIPPGQLEAAAMCGLSPRQT 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              + +PQ +R  +P L S+ ++++K S++   +   DL+ VG  + + T + +E+
Sbjct: 133 LWYIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 188


>gi|312865611|ref|ZP_07725836.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098879|gb|EFQ57098.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 514

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 70/120 (58%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG +H +  R V+LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMSEIVRGGIYAVDKGQFEAATALGFSHGQTMRKVVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +   +L   G T+  QT +  +  LI   IY  L+  +   +  L  ++
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYKYFQTFLIIAVIYFILTFTVTRILRYLEHRL 503


>gi|308185548|ref|YP_003929679.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056058|gb|ADO08230.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 268

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 79/131 (60%), Gaps = 5/131 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A++ EI R+G+ +V RGQMEA  ALG+++ +A RLV++PQ +R ++P + +Q+
Sbjct: 107 ALSLIASAYMGEIFRAGIQSVERGQMEACRALGMSYGRAMRLVVIPQGIRRVLPAIVNQF 166

Query: 332 LNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + ++K+SSL   +G      +L  VG      TG    ++L  +F YL +++ +   +N 
Sbjct: 167 IAIIKDSSLVYLLGLMTQQRELFRVGQDAAVLTGNLSPLMLAGLF-YLIITVPLTHMVNY 225

Query: 388 LNAKIALKEKK 398
           ++ +     ++
Sbjct: 226 VDVRYRTGRRR 236


>gi|153830814|ref|ZP_01983481.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|148873698|gb|EDL71833.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
          Length = 223

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 98/169 (57%), Gaps = 11/169 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           + T  ++  +  V  ++L+LF   + R F       L  LYIS F   G P LV + L  
Sbjct: 19  LGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYISFFR--GTPLLVQLFL-- 73

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L++  P +  F+ + G      F +  I L+ + AA++AE +R+ +I + R QMEA+++
Sbjct: 74  -LYYGLPQV--FSLLVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLS 127

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 128 VGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|85717304|ref|ZP_01048258.1| polar amino acid ABC transport permease protein [Nitrobacter sp.
           Nb-311A]
 gi|85695893|gb|EAQ33797.1| polar amino acid ABC transport permease protein [Nitrobacter sp.
           Nb-311A]
          Length = 75

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 54/70 (77%), Gaps = 1/70 (1%)

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           PPLT+QYLNL KNSSLAVA+G+ DL SV  GT ++QTGQAIEI+ I M +YL +S++ + 
Sbjct: 1   PPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTLSQTGQAIEIVAITMGVYLLISLVTSG 60

Query: 384 FMNRLNAKIA 393
            M+  + +IA
Sbjct: 61  IMSVYSWRIA 70


>gi|311071035|ref|YP_003975958.1| putative ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310871552|gb|ADP35027.1| putative ABC transporter permease [Bacillus atrophaeus 1942]
          Length = 224

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 23/224 (10%)

Query: 177 SFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +FPTL      T+       +F+ + G+VL+L         H+     L  +YIS F   
Sbjct: 12  AFPTLVGALPITLFMAVAAMIFAVIGGLVLALITKNHIPVLHQ-----LSKVYISFFR-- 64

Query: 231 GLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           G+PTLV L  + Y L    P + +   +  +          I LS   AA++AEI R+ L
Sbjct: 65  GVPTLVQLFLIYYGLPQLFPEMSKMTALTAAI---------IGLSLKNAAYLAEIFRAAL 115

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQ+EA +++G+T  +A R ++LPQA+R+ IP   + ++ LLK +SLA  +G  ++
Sbjct: 116 NSVDEGQLEACLSVGMTKLQAYRRIILPQAVRNAIPATGNTFIGLLKETSLAFTLGVMEM 175

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + G    +   +  E  L    +Y  L+I+ ++  +     I+
Sbjct: 176 FAQGKMYASGNLKYFETYLAVAVVYWILTIIYSVLQDLFERAIS 219


>gi|304391887|ref|ZP_07373829.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein BztC [Ahrensia sp. R2A130]
 gi|303296116|gb|EFL90474.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein BztC [Ahrensia sp. R2A130]
          Length = 432

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 58/82 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE++R GL A+P+GQ EAA ALGL + +ATRL++LPQA++  IP + + 
Sbjct: 302 IMVTLFASAYMAEVIRGGLAALPKGQYEAADALGLNYWQATRLIILPQALKISIPGIVNT 361

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K++ L   +G  D + +
Sbjct: 362 FIGLFKDTVLVSIIGILDPIGI 383


>gi|284800042|ref|ZP_05985523.2| L-cystine ABC transporter, permease protein [Neisseria subflava
           NJ9703]
 gi|284796209|gb|EFC51556.1| L-cystine ABC transporter, permease protein [Neisseria subflava
           NJ9703]
          Length = 227

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219

Query: 391 K 391
           +
Sbjct: 220 R 220


>gi|146284417|ref|YP_001174570.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145572622|gb|ABP81728.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|327482802|gb|AEA86112.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 229

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 17/189 (8%)

Query: 193 SFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           S + G++L+  L   R SRH      +ALP  YI  F   G P LV + L Y        
Sbjct: 27  SVITGLILAVPLGIARSSRHL---AVRALPYGYI--FFFRGTPLLVQLFLVYY------G 75

Query: 251 LGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + QF+ +  S + P     Y    I ++ +TAA+IAEI+R  +  VP G++EAA ALG++
Sbjct: 76  MAQFDIVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVPHGEVEAARALGMS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A   ++LP+A R  +P  +++ + +LK S+LA  +   +L  +   I  +T    E+
Sbjct: 136 RSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMARKIAARTYLHEEM 195

Query: 367 ILIWMFIYL 375
            L    IYL
Sbjct: 196 FLTAGLIYL 204


>gi|86360922|ref|YP_472809.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285024|gb|ABC94082.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 281

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI RSG+ ++ RGQ EA+ ++G       R ++LPQA+  IIPP  +Q
Sbjct: 154 LALSLCYGAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQ 213

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++++LK+SSL   +G  +L+ +  T+  +T Q +E+++    +Y  +SI + L   R+  
Sbjct: 214 FISMLKDSSLVSVIGVWELMFLARTLGQKTFQHMEMLISAAMLYWIMSIGLELIQARIER 273

Query: 391 KIALKEKK 398
             A  + +
Sbjct: 274 HYARSKVR 281


>gi|308177956|ref|YP_003917362.1| glutamate ABC transporter inner membrane subunit GluC [Arthrobacter
           arilaitensis Re117]
 gi|307745419|emb|CBT76391.1| glutamate ABC transporter, inner membrane subunit GluC
           [Arthrobacter arilaitensis Re117]
          Length = 225

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 252 GQFNFIGGSTVSPEFMSL-YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           GQ  F+        F  L  + L+ Y AAF+ E +RSG+  VP GQ EAA A+GL+   A
Sbjct: 78  GQLGFVLSGDFQANFFRLAVVGLAVYHAAFVCEAIRSGVNTVPLGQAEAARAIGLSFLPA 137

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            RLV+LPQA R  I PL +  + L+KNS++A AVG
Sbjct: 138 ARLVILPQAFRGAIVPLGNTLIALIKNSTVA-AVG 171


>gi|33591320|ref|NP_878964.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
 gi|33570962|emb|CAE40434.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
          Length = 264

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 14/217 (6%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+ T A  ++ +  +GIV+ +     +R    K  + L   Y+  F    +P LV + L 
Sbjct: 42  TLGTAALAWILALGIGIVVGV-----ARTTQSKWARILGATYVEFFR--NIPLLVQMFLW 94

Query: 242 YQLHFDKPVLGQFNFIGG-STVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           Y   F  P +          ++ P    F+   + L  YT++ +AE VR+G+ + P  Q 
Sbjct: 95  Y---FVVPEILPVQLGDAIKSIPPPWGIFIPAVLCLGFYTSSRVAEQVRAGIESRPARQR 151

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
            AA ALG+   +  R VLLP + R I+PPLTS+ LNL+KN+S+A  +G  +LV    ++ 
Sbjct: 152 MAATALGMRPSQVYRYVLLPTSFRIILPPLTSELLNLIKNTSVAFTIGLLELVGAARSMQ 211

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             + Q  E        Y  L++++   M  +  ++A+
Sbjct: 212 EFSFQVFEAFAGATLCYFLLNLIVLRAMRYIETRLAV 248



 Score = 43.5 bits (101), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T   A    I A  IG +VG  R + +K    +   YVE FRNIP LV 
Sbjct: 31  YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARILGATYVEFFRNIPLLVQ 90

Query: 145 IFFLYKSVLSVLPI----PDHSIVLPFGMFL 171
           +F  Y  V  +LP+       SI  P+G+F+
Sbjct: 91  MFLWYFVVPEILPVQLGDAIKSIPPPWGIFI 121


>gi|2507497|sp|P45023|Y1079_HAEIN RecName: Full=Probable amino-acid ABC transporter permease protein
           HI_0179
 gi|1574633|gb|AAC22735.1| amino acid ABC transporter, permease protein [Haemophilus
           influenzae Rd KW20]
          Length = 210

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%), Gaps = 19/207 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I   + + +  P
Sbjct: 17  FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 71

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+
Sbjct: 72  EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 123

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V     N T    E ILI
Sbjct: 124 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 180

Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393
           +     IY     +++   +RL  +++
Sbjct: 181 YSEAALIYWIFCFVLSFLQDRLEIRLS 207


>gi|22536321|ref|NP_687172.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|25010207|ref|NP_734602.1| hypothetical protein gbs0132 [Streptococcus agalactiae NEM316]
 gi|76798972|ref|ZP_00781172.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 18RS21]
 gi|77409056|ref|ZP_00785774.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae COH1]
 gi|77411816|ref|ZP_00788151.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae CJB111]
 gi|77414941|ref|ZP_00791039.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 515]
 gi|22533144|gb|AAM99044.1|AE014197_12 amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|23094559|emb|CAD45777.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76585667|gb|EAO62225.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 18RS21]
 gi|77159009|gb|EAO70222.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 515]
 gi|77162151|gb|EAO73127.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae CJB111]
 gi|77172350|gb|EAO75501.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae COH1]
 gi|319744066|gb|EFV96443.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 516

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ +V +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFSVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTV 491


>gi|328544775|ref|YP_004304884.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
 gi|326414517|gb|ADZ71580.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 221

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 12/177 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           ++ F  +   VL  F T  +R  H K   AL  +Y   F      T +L+ L +  ++  
Sbjct: 26  VYTFGSIFFGVLIGFVTCAARLSHWKALNALARIYQEIFRC----TPLLVQLLW-FYYAF 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+L     IGGS      ++  + LS Y  AF AEI R G++++ +GQ EAA A+G+   
Sbjct: 81  PLL-----IGGSI--DNRVAAMLTLSLYVGAFYAEIFRGGIVSIDKGQREAAAAIGMNPW 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           ++   ++LPQA++ ++P   +Q +   KN+SL   +  ADL  +   +  QT + +E
Sbjct: 134 QSMTRIILPQALKRMLPSFINQSVIQFKNTSLVSVISVADLAYMAAVVNGQTYRPLE 190


>gi|315640218|ref|ZP_07895336.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter permease [Enterococcus italicus DSM 15952]
 gi|315484007|gb|EFU74485.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter permease [Enterococcus italicus DSM 15952]
          Length = 236

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 77/130 (59%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S EF++  +ALS  + A+I E++R GL ++ +GQMEA  +LGL+  +  + +++PQA+R 
Sbjct: 103 SREFLTAVVALSINSGAYICELLRGGLESIDKGQMEAGRSLGLSRWQTMKAIIIPQAVRV 162

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P L ++++ ++K SS+   VG  D++     +   T    E +++   IY  L+  + 
Sbjct: 163 VLPGLGNEFIMMIKESSIVSVVGVFDVMYTYNIVKASTYSIFEPLIVVGIIYFLLTAGLT 222

Query: 383 LFMNRLNAKI 392
             M+ L  ++
Sbjct: 223 SLMSMLEKRM 232


>gi|312278008|gb|ADQ62665.1| Amino acid (Glutamine) ABC transporter, permease protein
           [Streptococcus thermophilus ND03]
          Length = 226

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 15/161 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250
           F  +LG+++SL     ++    K  + L  LY+  F   G P +V I + + L H + P 
Sbjct: 30  FGTILGVLVSL-----AKRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + QF  +    S + P      I LS  + A+I+E VR+G+ ++P+GQ+EAA +LG+   
Sbjct: 83  V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQIEAAYSLGIRPW 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
              R V+LPQA+++I+P L ++++ ++K+SSL   +G  +L
Sbjct: 138 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 178


>gi|298369020|ref|ZP_06980338.1| L-cystine ABC transporter, permease protein [Neisseria sp. oral
           taxon 014 str. F0314]
 gi|298283023|gb|EFI24510.1| L-cystine ABC transporter, permease protein [Neisseria sp. oral
           taxon 014 str. F0314]
          Length = 238

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 13/202 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   V+ I ++L     S     KT   L   YIS  +I G P LV + + +   +  P
Sbjct: 43  FLIGMVIAIAVALVRIMPSGGIVRKTLLKLVETYIS--IIRGTPLLVQLVIVF---YGLP 97

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G F       + P   +  I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +
Sbjct: 98  SVGIF-------IDP-IPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQ 149

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   + + + 
Sbjct: 150 TFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIE 209

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
              +Y     ++ L   RL  +
Sbjct: 210 AALVYWCFCKVLFLIQARLENR 231


>gi|229843882|ref|ZP_04464023.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 6P18H1]
 gi|229812876|gb|EEP48564.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 6P18H1]
          Length = 238

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 19/205 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I   + + +  P
Sbjct: 45  FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+
Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V     N T    E ILI
Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208

Query: 370 W---MFIYLSLSIMIALFMNRLNAK 391
           +     IY     +++   +RL  +
Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIR 233


>gi|149187234|ref|ZP_01865532.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148838770|gb|EDL55709.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 300

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 66/112 (58%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G  ++    +S  I +   ++A++AEIVR+GL A+P+GQ EA  +LGL+     R V+ P
Sbjct: 165 GPQSLWENLLSGVICIGLLSSAYVAEIVRAGLNAIPKGQWEAGQSLGLSTWHQYRDVIAP 224

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           Q + +I P L  Q ++L+K++S+   +   ++  VG  I N +G   EI LI
Sbjct: 225 QVLTTISPALAGQAISLVKDTSIVSLISIQEMTFVGTEIANSSGLIFEIWLI 276


>gi|83648450|ref|YP_436885.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83636493|gb|ABC32460.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 365

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 92/160 (57%), Gaps = 13/160 (8%)

Query: 196 LGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +GIV+SL    A  L R       K++ ++YI  +   G+P   LI + +      P+  
Sbjct: 168 VGIVVSLPIGVALALGRRSEMPIVKSISVVYIEFWR--GVP---LITVLFMASVMLPL-- 220

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F+   T + + +   I +  + +A++AE+VR GL A+P+GQ EAA +LGL++ K   
Sbjct: 221 ---FMSEGTETDKLVRAMIGVIMFQSAYMAEVVRGGLQAIPKGQYEAAHSLGLSYWKMMF 277

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            ++LPQA++ +IP + + ++ L K++SL + +G  DL+++
Sbjct: 278 FIILPQALKLMIPGIVNTFIALFKDTSLVLIIGLFDLLAI 317


>gi|121634582|ref|YP_974827.1| putative amino acid permease integral membrane protein [Neisseria
           meningitidis FAM18]
 gi|161869734|ref|YP_001598901.1| amino acid permease integral membrane protein [Neisseria
           meningitidis 053442]
 gi|218767907|ref|YP_002342419.1| putative amino acid permease integral membrane protein [Neisseria
           meningitidis Z2491]
 gi|304387901|ref|ZP_07370075.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Neisseria meningitidis ATCC 13091]
 gi|120866288|emb|CAM10029.1| putative amino acid permease integral membrane protein [Neisseria
           meningitidis FAM18]
 gi|121051915|emb|CAM08221.1| putative amino acid permease integral membrane protein [Neisseria
           meningitidis Z2491]
 gi|161595287|gb|ABX72947.1| amino acid permease integral membrane protein [Neisseria
           meningitidis 053442]
 gi|261392845|emb|CAX50426.1| putative amino acid ABC transporter permease protein [Neisseria
           meningitidis 8013]
 gi|304338166|gb|EFM04302.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Neisseria meningitidis ATCC 13091]
 gi|316983780|gb|EFV62761.1| amino ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Neisseria meningitidis H44/76]
 gi|319410154|emb|CBY90490.1| putative amino acid ABC transporter permease protein [Neisseria
           meningitidis WUE 2594]
 gi|325127933|gb|EGC50836.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           N1568]
 gi|325129938|gb|EGC52738.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           OX99.30304]
 gi|325131978|gb|EGC54677.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M6190]
 gi|325137809|gb|EGC60384.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           ES14902]
 gi|325140058|gb|EGC62587.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           CU385]
 gi|325144174|gb|EGC66481.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M01-240013]
 gi|325200526|gb|ADY95981.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           H44/76]
 gi|325203874|gb|ADY99327.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M01-240355]
 gi|325206370|gb|ADZ01823.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M04-240196]
          Length = 238

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|110636301|ref|YP_676509.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110287285|gb|ABG65344.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chelativorans sp. BNC1]
          Length = 213

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 83/164 (50%), Gaps = 13/164 (7%)

Query: 231 GLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           G+P LVL+ L Y  L F            G  VSP FM+  IALS + A ++ EI RS +
Sbjct: 61  GVPPLVLLFLAYFGLAF-----------AGIVVSP-FMASCIALSFFAAVYLGEIWRSAI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P  Q EA+ +L L+  +    V++PQA+R   P      + L+KN+SLA  VG  +L
Sbjct: 109 QSIPIAQWEASESLSLSWAQQMIYVIVPQAIRLATPSSVGFIVQLVKNTSLASIVGLVEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              G  + N T QA ++ L    IY  +   I+L    L  K A
Sbjct: 169 TRAGQLVNNATFQAFQVFLTVAIIYFCICYPISLISRFLEKKTA 212



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 32/54 (59%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T WL+ + ++  +++G  +   RLS +KL+  I    V + + +PPLV++F  Y
Sbjct: 19  TVWLSLASLVLGSVVGIGICLLRLSNSKLIGAIAATIVAIGQGVPPLVLLFLAY 72


>gi|300172941|ref|YP_003772107.1| polar amino acid ABC transporter permease [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299887320|emb|CBL91288.1| Polar amino acid ABC transporter, permease protein [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 213

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 74/129 (57%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IA     AA++AEI R GL +VPRGQ +AA  LG T  +    ++LPQ ++ +
Sbjct: 82  PRFEAAIIAFIINYAAYLAEIFRGGLQSVPRGQYDAAKVLGFTKIQTFFKIVLPQVIKIV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   ++ +NL+K++SL   +G  D++  G    ++    I  +L+ + IYL ++ ++ +
Sbjct: 142 VPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRDVTLIPYLLVGL-IYLIMTAIVTV 200

Query: 384 FMNRLNAKI 392
            + R   ++
Sbjct: 201 LLRRTEKRL 209


>gi|300725184|ref|YP_003714512.1| putative high-affinity glutamine ABC transporter membrane protein
           [Xenorhabdus nematophila ATCC 19061]
 gi|297631729|emb|CBJ92448.1| putative high-affinity glutamine transport protein (ABC
           superfamily, membrane) [Xenorhabdus nematophila ATCC
           19061]
          Length = 247

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+  T+A++A  V++G++A+  GQ  A ++LG    +    ++LPQA+R +
Sbjct: 94  PEITTVVCALALITSAYLAHGVKAGILAISEGQWRAGLSLGFNRWEVLWYIILPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG  +L  +   + N++    +E+ L    IY  + + + 
Sbjct: 154 VPSFINQWIALIKDTSLAYIVGVGELSFLATQVNNRSMVYPMEVFLFVALIYFVMCLSLE 213

Query: 383 LFMNRLNAKIALKEKK 398
           L  N +  + ++K +K
Sbjct: 214 LIANYVARRFSVKREK 229


>gi|260655737|ref|ZP_05861206.1| L-cystine ABC transporter, permease protein [Jonquetella anthropi
           E3_33 E1]
 gi|260629353|gb|EEX47547.1| L-cystine ABC transporter, permease protein [Jonquetella anthropi
           E3_33 E1]
          Length = 226

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 110/202 (54%), Gaps = 20/202 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F++ IV+ L    LS+ F          LYIS F   G P   L+A  +  +F     G
Sbjct: 37  AFLIAIVMDLRIPGLSQFFR---------LYISFFR--GTP---LMAQLFCFYF-----G 77

Query: 253 QFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               I G+  S   F +  I LS  +AA++AE +R+ + +VP+GQ EAA ++G+T+ +A 
Sbjct: 78  ILPAIRGAVKSVSSFQAALIILSLASAAYMAESLRAAIGSVPKGQFEAAQSIGMTYPQAM 137

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA+R  +P L S ++N++K++SL  A+G  ++++      +   + +E  L  +
Sbjct: 138 RRIILPQAVRVALPTLFSSFINIVKDTSLVFAIGVKEMMAQAQLEGSGNYRYLEAYLCVL 197

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            ++ +++ ++      L  ++A
Sbjct: 198 LVFWAITAVMGRTQRALEGRLA 219


>gi|284992301|ref|YP_003410855.1| polar amino acid ABC transporter inner membrane subunit
           [Geodermatophilus obscurus DSM 43160]
 gi|284065546|gb|ADB76484.1| polar amino acid ABC transporter, inner membrane subunit
           [Geodermatophilus obscurus DSM 43160]
          Length = 301

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 22/162 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLIALKYQLHFDK 248
           V + VLG+VLS+   RLS H   +       + ++T + F   +P LVLI   + L+F  
Sbjct: 81  VLATVLGLVLSV--GRLSEHRWVR-------VVVTTSIEFFRAVPLLVLI---FALYFLL 128

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P  G             F +L   L  Y AA +AEI R+G+++V RGQ EAA  LG+   
Sbjct: 129 PKFG--------IRLSAFWALVGGLVLYNAAVLAEIFRAGILSVDRGQREAAYGLGMRKT 180

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +   LVLLPQA+R ++P L +Q + LLK++SL   + F +L+
Sbjct: 181 QVMTLVLLPQAVRRMLPVLIAQLVVLLKDTSLGFIISFPELL 222



 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 44/86 (51%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+     E  +  V +   S    A+    + T  +A  GM+ AT++G ++  GRLS ++
Sbjct: 40  LAGNGQLEAQRWAVLFDPASQVPQALGQALLRTLQVAIVGMVLATVLGLVLSVGRLSEHR 99

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149
            V  +    +E FR +P LV+IF LY
Sbjct: 100 WVRVVVTTSIEFFRAVPLLVLIFALY 125


>gi|119025599|ref|YP_909444.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765183|dbj|BAF39362.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           adolescentis ATCC 15703]
          Length = 225

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 100/215 (46%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +            +G      K LPL  I  F++ G             
Sbjct: 29  LFSTILGVILVMMRISPIASLRTVSGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q  F    T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EAA AL
Sbjct: 76  -----AYAQLKFSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEAARAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361
           GL   +A   ++LPQA R  + PL +  + LLKNS++A A   A   S  +   I     
Sbjct: 131 GLNFMQAATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSTMMSEMIEYHAD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           Q + I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 191 QIVPIFLIFAFGYVVLIIPIGMLTTYLSNKLAVRR 225


>gi|251788880|ref|YP_003003601.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537501|gb|ACT06122.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 238

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 106/199 (53%), Gaps = 17/199 (8%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +F  SF +G VLS  L A R+S  +   +G A   LY+  F   G P L+ + L Y    
Sbjct: 24  LFFSSFAVGAVLSVLLVAMRVSAVW-PLSGFAR--LYMLAFR--GTPLLIQLFLIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
               LGQF+ +  S   P     F    +AL+  TA + AEI+R  L+++P GQ+EA +A
Sbjct: 76  ---GLGQFSVVRDSLFWPVLRDPFSCAVLALALCTAGYTAEILRGALLSIPAGQIEAGLA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++     R ++ P A+R  +P  +++ + L+K+++LA  V   D+  V   II +T +
Sbjct: 133 CGMSRWLLLRRIIAPIALRHALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTYR 192

Query: 363 AIEIILIWMFIYLSLSIMI 381
            +E+ +    IYL L+ +I
Sbjct: 193 TLEVFVCAALIYLLLNFII 211


>gi|238063456|ref|ZP_04608165.1| ABC glutamate transporter permease component [Micromonospora sp.
           ATCC 39149]
 gi|237885267|gb|EEP74095.1| ABC glutamate transporter permease component [Micromonospora sp.
           ATCC 39149]
          Length = 290

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 59/92 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +  +L I L  Y  + +AEI R+G+ AVP GQ E A A+GL   +  RL+LLPQA RS++
Sbjct: 136 KLWALVIGLMLYNGSVLAEIFRAGINAVPYGQTEGAYAIGLRKNQVLRLILLPQAFRSML 195

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           P + SQ + LLK+++L   + + +L+ VG  I
Sbjct: 196 PAIVSQLVVLLKDTALGFIITYPELLFVGKQI 227


>gi|146307036|ref|YP_001187501.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145575237|gb|ABP84769.1| Diaminopimelate ABC transporter membrane protein / L-cystine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 222

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 74/128 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+ +EI+R+ + ++ RGQ EAA ++G++  +     +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYTSEILRAAIASIDRGQWEAAASIGMSKAQTLYRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY +L+ ++A F  RL A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWALASVLAHFQARLEA 213

Query: 391 KIALKEKK 398
           ++   E+ 
Sbjct: 214 RVNRHEQD 221


>gi|238752138|ref|ZP_04613620.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia rohdei ATCC 43380]
 gi|238709611|gb|EEQ01847.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia rohdei ATCC 43380]
          Length = 346

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 54/76 (71%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +LGL + K   LV+LPQA++ +IP L +  + L 
Sbjct: 220 FQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALF 279

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 280 KDTSLVIIIGLFDLFS 295


>gi|227496261|ref|ZP_03926557.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Actinomyces urogenitalis DSM 15434]
 gi|226834186|gb|EEH66569.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Actinomyces urogenitalis DSM 15434]
          Length = 285

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-------VLIALKYQ 243
           V + ++GIVL+  AT ++R       + +   Y+  F   G P         +L AL  +
Sbjct: 38  VAAMLIGIVLAA-ATAVARQSENPVLRYVAYAYV--FFFRGTPIYTQLVFWGLLPALYNK 94

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P   +F       V    ++  + L     A+++EI+RSGL +V  GQ EAA AL
Sbjct: 95  LSLGVPFGPEFFVFSTKEVFSGAVAAILGLGLNEGAYLSEIMRSGLNSVDAGQREAASAL 154

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQ 362
           G+++    R ++LPQAMR I+PP  ++ +++LK +SL +AV F  +L  V   + N+  Q
Sbjct: 155 GMSNGTILRRIILPQAMRVIVPPTGNETISMLKTTSLVLAVPFTKELTFVANNVGNRLFQ 214

Query: 363 AIEIILIWMFIYL 375
            I ++++    YL
Sbjct: 215 PIPLLIVAALWYL 227


>gi|328881416|emb|CCA54655.1| ABC transporter permease [Streptomyces venezuelae ATCC 10712]
          Length = 282

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 72/113 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL   +    ++LPQAMR+I+PP  + 
Sbjct: 153 IGLTLHEAAYAAEVVRGGILSVDRGQIEAAQSLGLGRWRRLSRIVLPQAMRAIVPPAGNM 212

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            +  LK +S+   +   DL+     + ++T + I ++L+    Y++++ +++L
Sbjct: 213 LIGTLKGTSIVSVIAVQDLLYSTQLVYHRTYEIIPLLLVATLWYVAVTSVLSL 265


>gi|311695810|gb|ADP98683.1| amino acid ABC transporter, permease protein [marine bacterium
           HP15]
          Length = 223

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 23/170 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L    F+ +GLP L+                      G  + P   +   A++  
Sbjct: 67  RGTPILVQVLFIFYGLPDLI----------------------GGPIDP-LTAGIAAIALN 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+E+VR G+ ++ +GQ EA ++LGL+  +    V+ PQA R +IPPL +Q +  +K
Sbjct: 104 SGAYISEVVRGGVQSIDKGQTEAGLSLGLSRTQTFWSVVWPQAFRRMIPPLGNQAIVSIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++SL   +G  +LV  G   I  T  A E+  +   +YL++++ +++ + 
Sbjct: 164 DTSLFSVIGVGELVRQGQIYIANTFTAFEVYFVVAILYLAITLSLSIILR 213


>gi|283785105|ref|YP_003364970.1| putative ABC transporter, inner membrane protein [Citrobacter
           rodentium ICC168]
 gi|282948559|emb|CBG88149.1| putative ABC transporter, inner membrane protein [Citrobacter
           rodentium ICC168]
          Length = 225

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 17/163 (10%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI L+  A R      +        L++   LI G+P +++I   + + +  PVL     
Sbjct: 46  GIALACLAWRFPGVVRKG-------LFVWAELIRGIPLILVI---FWMWYLLPVL----- 90

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG    P  +++ +AL+ +TAA +   V +GL A+P GQ EAA+  G +  +A  L+LL
Sbjct: 91  TGGDL--PAALTVTLALAWFTAASVMHSVYAGLNALPAGQNEAAVTQGFSPLRALTLILL 148

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PQ +R+++P LT   + LLK++SLA  V   +L +V G + N+
Sbjct: 149 PQVLRNVLPSLTGIAIGLLKDTSLAFIVNVPELTTVAGQVNNR 191


>gi|76788643|ref|YP_328867.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding
           protein/permease [Streptococcus agalactiae A909]
 gi|76563700|gb|ABA46284.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Streptococcus agalactiae
           A909]
          Length = 516

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ +V +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFSVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTV 491


>gi|325135989|gb|EGC58599.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M0579]
 gi|325142042|gb|EGC64473.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           961-5945]
 gi|325198007|gb|ADY93463.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           G2136]
 gi|325202416|gb|ADY97870.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M01-240149]
 gi|325207832|gb|ADZ03284.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           NZ-05/33]
          Length = 238

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|312867998|ref|ZP_07728202.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096402|gb|EFQ54642.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 228

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 15/209 (7%)

Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------H 245
           V+ I+LS F      L + +  K  ++  ++Y++   I   P ++LI   Y L       
Sbjct: 25  VVSILLSFFPALFLALGQIYKVKGVRSFSVVYLA--FIRATPPILLILFFYSLFPSLLNS 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F K +   FN      ++P + + +I  S  T   +AEI+RS ++ V +GQ+EAA A+GL
Sbjct: 83  FFKSIGSHFNVF---EINPIYYA-FIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAIGL 138

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+R+A   ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     +   Q  E
Sbjct: 139 TNRQAYIRIVFPQALRSALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQYFE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             L+   +Y+ +  +I    N L  ++ L
Sbjct: 199 SYLVIFILYIVICGVIQWGFNLLEKRLTL 227


>gi|225016647|ref|ZP_03705839.1| hypothetical protein CLOSTMETH_00556 [Clostridium methylpentosum
           DSM 5476]
 gi|224950611|gb|EEG31820.1| hypothetical protein CLOSTMETH_00556 [Clostridium methylpentosum
           DSM 5476]
          Length = 232

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 21/179 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPL-----LYISTFLIFGLPTLVLIALKYQLH 245
           VF+ +LG+++      +++ +  +TGK   L     +Y++ F   G P +V + + Y   
Sbjct: 36  VFATLLGVIIGTIVA-IAKVYSFQTGKLKILDKILSVYLTVFR--GTPIVVQLMIWY--- 89

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                     FI  ++V    +   IA    + A++AEIVR+G++A+ +GQ EA  +LGL
Sbjct: 90  ----------FIILTSVDNGVLVAIIAFGINSGAYVAEIVRAGILAIDKGQTEAGRSLGL 139

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +  +  + ++LPQA ++I+P L ++ + LLK +S+   V   DL  VG  + ++T  A+
Sbjct: 140 SSGQTMKSIILPQAFKNILPALGNELIALLKETSVVGYVAVVDLTKVGDLVRSRTMDAV 198


>gi|222083301|ref|YP_002542704.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221738681|gb|ACM39519.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 226

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 5/139 (3%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P    FN   G  +        +A+  Y  A+I E +RSG  ++ RGQ EAA ++GL
Sbjct: 80  FPLPAQDWFNANNGDVIFAA-----VAIGLYYGAYICEDIRSGYRSISRGQYEAARSIGL 134

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             R++   V++PQA+R+ +P L S+ + LLK++SLA+ +G  +L      I N+T    +
Sbjct: 135 NFRQSLHHVMMPQAVRASLPALISRAILLLKSTSLAMVIGVMELTYQTKEIQNETFLTFQ 194

Query: 366 IILIWMFIYLSLSIMIALF 384
              I   IYL LS+ + L 
Sbjct: 195 AFSIATIIYLVLSMAVILL 213


>gi|162147152|ref|YP_001601613.1| putative inner membrane amino-acid ABC transporter permease
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785729|emb|CAP55300.1| putative inner membrane amino-acid ABC transporter permease protein
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 499

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 64/91 (70%), Gaps = 1/91 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP F++  +AL    AA+ AE  R+GL +V RGQ+EAA+AL +TH +A R V++PQ
Sbjct: 357 GLRLSP-FVAGVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTHMQALRFVVVPQ 415

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A+R +IP +T+ +++LLK+SSL   +   +L
Sbjct: 416 AVRMVIPVMTNDFISLLKDSSLVSVITLTEL 446


>gi|86742204|ref|YP_482604.1| amino acid ABC transporter permease [Frankia sp. CcI3]
 gi|86569066|gb|ABD12875.1| amino acid ABC transporter membrane protein 2, PAAT family [Frankia
           sp. CcI3]
          Length = 293

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 36/210 (17%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALK 241
            +F+  +G +L+L   RLSR    +          ++LP+L +  F   GLP     AL 
Sbjct: 80  MLFASAVGTLLAL--ARLSRRRAVRIPATLLVELFRSLPVLMLILFAYLGLP-----ALG 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           ++L                     F +L I L+ Y  A ++EI R+G+ +V RGQ EAA 
Sbjct: 133 WRLS-------------------AFWALVIGLTAYNGAVLSEIFRAGIQSVDRGQTEAAA 173

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+GL   +  RL+  PQA+R + P L SQ + LLK++SL   + +++L+  G   +   G
Sbjct: 174 AVGLRPVQIFRLIQFPQAIRRMSPTLVSQLVTLLKDTSLGYVIAYSELLRSGRGAVEYLG 233

Query: 362 Q--AIEIILIWMFIYLSLSIMIALFMNRLN 389
              A+ I  +   +Y+  + +++L    L+
Sbjct: 234 SRYALPIYTVMAVMYIVTNGLLSLLARWLD 263



 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G ++T   A + M+ A+ +GTL+   RLS  + V     + VE+FR++P L++I F Y
Sbjct: 68  GLLDTLRAALTAMLFASAVGTLLALARLSRRRAVRIPATLLVELFRSLPVLMLILFAY 125


>gi|107026377|ref|YP_623888.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116692434|ref|YP_837967.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105895751|gb|ABF78915.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116650434|gb|ABK11074.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 218

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 22/218 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLI 238
           +T++  A  FV S VLG++L+L   ++SR+    T         ST +  I GLP +V +
Sbjct: 19  VTIEITACAFVLSSVLGLILALL--KVSRNRAVATAG-------STIINVIRGLPIIVQL 69

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              + ++F  P LG    +  S      + L IA S Y A    E  R+G+ A+ RGQ+E
Sbjct: 70  ---FYMYFVLPDLG----VQLSAFQAGVLGLGIAYSAYQA----ENFRAGIEAIDRGQIE 118

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A  +  A++   G  I +
Sbjct: 119 AAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIAS 178

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            T Q + +  +   +YL+L + +   +NRL  ++A++ 
Sbjct: 179 STFQNMSVYTLVALLYLALGLPLMFAVNRLGKRLAVRR 216


>gi|330837351|ref|YP_004411992.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329749254|gb|AEC02610.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 209

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 3/129 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +S  +A++ +T+A +AEIVR GL  +  GQ EAA ALGL   +    ++LPQA++ I
Sbjct: 80  PALVSAIVAMTVFTSAMVAEIVRGGLNGIAAGQWEAAKALGLNKFQMYIYIILPQAVKKI 139

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIM 380
           + PL  Q++  +K++S    VG  +L+  G  I+    ++   + +  +  FIY  +++M
Sbjct: 140 LVPLMGQFVTAIKDTSFCWIVGIEELMGAGMIIMGKFVKSSHVLGMYAVIAFIYYMVNVM 199

Query: 381 IALFMNRLN 389
           +     R+ 
Sbjct: 200 VNWLSRRVR 208


>gi|288959840|ref|YP_003450180.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912148|dbj|BAI73636.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 357

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 64/91 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + +   IA+  + +A++AEI+R+GL ++P GQ EAA ALGL + ++ RLV+LPQA+R++I
Sbjct: 225 KLLRAQIAIILFVSAYLAEIIRAGLQSIPAGQYEAAQALGLGYWQSMRLVILPQALRTVI 284

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           P + +  + L ++++L + +G  DL++   T
Sbjct: 285 PSIVTLAIGLFQDTTLIIVIGLFDLLNTART 315


>gi|271502168|ref|YP_003335194.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345723|gb|ACZ78488.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 316

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   +A+ AEI+R G++ V  GQ EAA ALGL   + T  ++LPQA+RSI+P   ++
Sbjct: 164 LGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQALRSILPTGFNE 223

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNR 387
            ++L K +S+   +   +L      I N+T Q I +++   +W  +  S+  ++  F+ R
Sbjct: 224 IISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATVWYLVITSVLSVLQYFVER 283

Query: 388 LNAKIALKE 396
             A+ A++E
Sbjct: 284 YVARGAVRE 292


>gi|323356726|ref|YP_004223122.1| amino acid ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323273097|dbj|BAJ73242.1| ABC-type amino acid transport system, permease component
           [Microbacterium testaceum StLB037]
          Length = 299

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 73/118 (61%), Gaps = 11/118 (9%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV + L   L++  PV+G         + P + ++ IAL CY  + +AE++R+G+ +
Sbjct: 112 IPVLVFMFL---LYYGFPVIG-------IRMEP-YWAVVIALVCYNGSVLAEVIRAGVES 160

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +PRGQ EA  A+GL      RLVLLPQA+R+++P + +Q +  LK+++L   + + +L
Sbjct: 161 LPRGQAEAGYAIGLRKAGVMRLVLLPQAVRAMMPVIIAQLVVTLKDTALGFVITYPEL 218


>gi|313668732|ref|YP_004049016.1| amino acid permease integral membrane protein [Neisseria lactamica
           ST-640]
 gi|309379366|emb|CBX21933.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313006194|emb|CBN87656.1| putative amino acid permease integral membrane protein [Neisseria
           lactamica 020-06]
 gi|325134066|gb|EGC56721.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M13399]
          Length = 238

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 111 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 171 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|270488378|ref|ZP_06205452.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|270336882|gb|EFA47659.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
          Length = 251

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 11/216 (5%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   V S + G+  ++  T L        G    +L     L   +P ++
Sbjct: 17  TFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGLFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+  GQ
Sbjct: 77  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIMAIGAGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            N++    +E+ L    +Y  L + + L  N LN +
Sbjct: 187 NNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR 222


>gi|157691099|ref|YP_001485561.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157679857|gb|ABV61001.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 225

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 95/173 (54%), Gaps = 15/173 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LYIS   + G+P LV++   + L+F  P +G +F  +  + +   F S         AA+
Sbjct: 64  LYIS--FMRGVPILVIL---FILYFGFPYIGIEFTAVTAAIIGFSFNS---------AAY 109

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEI R+ L +VP GQ+EAA +LGL++ +  R V+LPQ++R  +PPL +  L+L+K SSL
Sbjct: 110 IAEINRAALSSVPSGQVEAAKSLGLSYWQTMRGVILPQSVRIALPPLANIMLDLIKASSL 169

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +L      +  +    + + ++   IY  +  +++L  + L  + A
Sbjct: 170 AAMITVPELFQQAKIVGGREFDYMTMYILVALIYWGICSVVSLLQDFLEKRYA 222


>gi|86135805|ref|ZP_01054384.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseobacter sp. MED193]
 gi|85826679|gb|EAQ46875.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseobacter sp. MED193]
          Length = 432

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 65/96 (67%), Gaps = 1/96 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++  IP
Sbjct: 297 FLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIP 356

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + +  + L K+++L   +   D+V  + G I+  T
Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDMVGMIRGPILAST 392



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
            G  I +G       SS  +  L GF+    L  + +  +  +G  +  GR S+  L+ W
Sbjct: 200 GGMLIPEGASESAMLSSVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSSMPLIKW 259

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           IC V++E  R + PL+ + F+   +LS    PD ++ L
Sbjct: 260 ICVVFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 296


>gi|83950491|ref|ZP_00959224.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
 gi|83838390|gb|EAP77686.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
          Length = 442

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 60/90 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++  IP + S 
Sbjct: 313 IMMTLFAAAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPGIVST 372

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++ + K+++L   +G  D++ +   I   T
Sbjct: 373 FIGIFKDTTLVSIIGLFDVIGLSNAIRADT 402


>gi|323698838|ref|ZP_08110750.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458770|gb|EGB14635.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 216

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 18/178 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +  FV+G +L     R S H   +  K     Y+S F   G P LV +A+ +   +  P+
Sbjct: 30  IIGFVIGHLLCF--GRFSEH---RLLKRSITAYVSFFR--GTPLLVQLAIIF---YFLPL 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G F         P   +  IALS  TAAF +EI+R G  ++P GQ+EAA  LGLT  + 
Sbjct: 80  FGIF--------IPSVAAAIIALSMNTAAFQSEILRGGFQSMPHGQIEAARDLGLTTWQI 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              + +PQ  R+ +P L ++ +++LKNS+L   +   DL+ +  T+ + T + IE  L
Sbjct: 132 RLHIQIPQVFRATLPALVNESIDILKNSALISTIAVTDLMRISQTLASTTFRPIEFFL 189



 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 18/102 (17%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VI 145
           ++VG   T W++F  +I   +IG L+  GR S ++L+      YV  FR  P LV   +I
Sbjct: 14  LMVGAWRTLWISFVSIIIGFVIGHLLCFGRFSEHRLLKRSITAYVSFFRGTPLLVQLAII 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F+        LP+        FG+F+ +   +   L+M+T A
Sbjct: 74  FYF-------LPL--------FGIFIPSVAAAIIALSMNTAA 100


>gi|300693655|ref|YP_003749628.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
 gi|299075692|emb|CBJ34989.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
          Length = 247

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 16/206 (7%)

Query: 195 VLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           VLGIVL+     A  L+R    +  +A     + T L++ +  + L+ L   ++F  P+L
Sbjct: 35  VLGIVLAFPLSVALALARLSPWRALRA-----VVTALVYAVRGVPLLMLILWVYFLVPLL 89

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              N  G       F ++   L+ Y   ++ E+VR+G+ A+P+GQMEAA ALG ++  A 
Sbjct: 90  IGHNVSG-------FTTMLCTLAIYEGVYLCEVVRAGIEALPKGQMEAARALGHSYLGAM 142

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIW 370
           RLV+LPQA+ +++P + +Q+++ +K ++L   +   +L      I N    +  +I  + 
Sbjct: 143 RLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQIFFLL 202

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             IY  +   +      L  +IA K 
Sbjct: 203 AVIYFVVCWSLTRAARALERRIAAKR 228


>gi|199597030|ref|ZP_03210463.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|199592163|gb|EDZ00237.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
          Length = 237

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 33/190 (17%)

Query: 189 IFVFSFVLGIVLSLFA--TRLS--RHFHEKTGKALPLLYISTF-----------LIFGLP 233
           I + SF +G++++L    TR+S  +    +  K + + Y+  F           + FGLP
Sbjct: 23  IALVSFAIGLIIALVTALTRISVRKGILIRIAKGIAVFYVWLFRSTPLLVQLFIVFFGLP 82

Query: 234 TLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           +L++  +  + +  D    G   F                 S  T A+ AE  R+ L+++
Sbjct: 83  SLIIPGIFPHGIKLDPAAAGIITF-----------------SLNTGAYCAETTRASLLSI 125

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA A+GL  R   R +++PQA+R+ IPPL++ +++L+K++SLA ++   ++  V
Sbjct: 126 DSGQWEAAYAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQV 185

Query: 353 GGTIINQTGQ 362
              I  +  Q
Sbjct: 186 SQQIAAENYQ 195


>gi|116496268|ref|YP_808002.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|191639796|ref|YP_001988962.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|227532736|ref|ZP_03962785.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239630724|ref|ZP_04673755.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|116106418|gb|ABJ71560.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
 gi|190714098|emb|CAQ68104.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|227189570|gb|EEI69637.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239527007|gb|EEQ66008.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|327383908|gb|AEA55384.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei LC2W]
 gi|327387089|gb|AEA58563.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei BD-II]
          Length = 486

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 34/189 (17%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           F+ V+GI++ L    L   F            + LPLL ++ F+  G+P+L+        
Sbjct: 301 FATVVGILVGLLGV-LPNQFARGVATTFIYIFRGLPLLVLALFIYTGVPSLI-------- 351

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         GS + P F++  I L+    A+ A  V+ G+ AV  GQMEAA +LG
Sbjct: 352 --------------GSKI-PAFVAGIITLTLNEGAYTAAFVKGGIQAVDDGQMEAARSLG 396

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L   G  II +    +
Sbjct: 397 LPFGKAMRRVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARN---M 453

Query: 365 EIILIWMFI 373
           E   IW  +
Sbjct: 454 EGFKIWTMV 462


>gi|262203727|ref|YP_003274935.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           bronchialis DSM 43247]
 gi|262087074|gb|ACY23042.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia
           bronchialis DSM 43247]
          Length = 582

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 77/117 (65%), Gaps = 5/117 (4%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI RSG+ +V  GQ+EA+ A+G ++R++ RLV++PQ +R ++P L +Q+++L+K+SS
Sbjct: 446 YIGEIFRSGIQSVDSGQLEASRAIGFSYRQSMRLVVVPQGVRRVLPALMNQFISLIKDSS 505

Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +G      +L +VG  +  QTG  +  ++    +YL+L+I +   +N ++ ++
Sbjct: 506 LVYFLGLLATQRELFAVGRDLNAQTGN-LSPLVAAGIVYLALTIPLTHLVNHIDNRL 561



 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+   I  G VNT  L+    +  TI+G L+    +S ++ + W  R+Y ++FR +P +V
Sbjct: 351 SFPDLIKTGLVNTLILSLVSGVLGTILGMLLAVAGISRSRWLRWPARIYTDIFRGLPAVV 410

Query: 144 VIFFL 148
           VI  +
Sbjct: 411 VILIV 415


>gi|290963273|ref|YP_003494455.1| amino acid permease [Streptomyces scabiei 87.22]
 gi|260652799|emb|CBG75932.1| putative amino acid permease [Streptomyces scabiei 87.22]
          Length = 222

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 1/127 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YT+AF+ E +RSG+  VP GQ EAA A+GL   +    V+LPQA R++IPPL S 
Sbjct: 96  LGLTAYTSAFVCEALRSGINTVPVGQAEAARAVGLGFGQTLGFVVLPQAFRAVIPPLGSI 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + L KN+++A+  G A+       +I   G Q I+I L +   ++ L +   L   RL 
Sbjct: 156 LIALTKNTTVALVAGVAEASVRMREMIEIYGDQVIQIFLGFAAGFVVLCLPTGLLFGRLA 215

Query: 390 AKIALKE 396
            ++A+  
Sbjct: 216 RRLAVAR 222


>gi|289678215|ref|ZP_06499105.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 154

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 24  IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 83

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 84  FIALFKDTSLVIIIGLFDLLN 104


>gi|218677804|ref|ZP_03525701.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 154

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ I L+ + +A++ EI R  + AVPRGQ EAA AL L +    R V+LPQA+R  +P
Sbjct: 23  WVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYVSRMRDVILPQALRISLP 82

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  VGF +L   G  I NQ  Q + +  +   +Y  +   + +  
Sbjct: 83  ATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGVVGILYFLMCCPLTILG 142

Query: 386 NRLNAKIALKEK 397
            RL  K A   +
Sbjct: 143 ARLERKFAASAR 154


>gi|241661638|ref|YP_002979998.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240863665|gb|ACS61326.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 217

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 243 QLHFDKPVLGQF--NFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           QL  + P+L Q    F G S    E   + +  I L+ YT+A++AE+ R  + A+PRGQ 
Sbjct: 59  QLFQNTPLLMQMFIVFFGASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQW 118

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA+ +L + + +  R V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + 
Sbjct: 119 EASSSLAMGYFQQMRHVVLPQAVRLSIAPTVGFSVQIVKGTAVASIIGFEDLSKLGSVLA 178

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           N T Q   I  +    Y +L   ++L+ + L  K+
Sbjct: 179 NATFQPFLIYGLVAIGYFALCWPLSLYASHLEKKL 213


>gi|332042181|gb|EGI78507.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 226

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 79/125 (63%), Gaps = 4/125 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + ++ALS   AA+  E + +G++++P GQMEAA + GL+  +A R V+LPQA+R  +P
Sbjct: 98  FATTWLALSLVLAAYAEESIWAGIVSLPDGQMEAARSTGLSWWQAMRWVVLPQALRRSVP 157

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIA 382
           PLT++ +++ KN++L   V  +++++      + +G    +    L ++ ++L + +M+A
Sbjct: 158 PLTNRVISITKNTALGSVVALSEILNQAQAASSTSGNPTPLTLGALAYLVVFLPV-VMLA 216

Query: 383 LFMNR 387
            ++ R
Sbjct: 217 RWIER 221


>gi|322373784|ref|ZP_08048319.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C150]
 gi|321277156|gb|EFX54226.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C150]
          Length = 516

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 66/111 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A+++EIVR G+ AV +GQ EAA ALG +H +  R ++LPQ +R+I+P   ++
Sbjct: 384 IIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNE 443

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++  +K++S+   +   +L   G T+  QT Q  +   +   IY  L+  +
Sbjct: 444 FVINIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTV 494



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 10/64 (15%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLS---ANKLVA-------WICRVYVEVFRNIPPLVVI 145
           T  ++  G +  T IG ++G  R +   ANKLVA       WI  VY+EVFR  P +V  
Sbjct: 302 TLLISIVGTVVGTFIGLMIGVYRTAPKAANKLVALLQKVFGWILNVYIEVFRGTPMIVQS 361

Query: 146 FFLY 149
             +Y
Sbjct: 362 MVIY 365


>gi|307132981|ref|YP_003884997.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306530510|gb|ADN00441.1| Amino acid ABC transporter, permease protein [Dickeya dadantii
           3937]
          Length = 223

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 113/209 (54%), Gaps = 17/209 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ VLG+VL+L   R SR         L  LYIS F   G+P+LV +   + ++F  P 
Sbjct: 31  LFAIVLGLVLAL--VRESRFV---VVAKLVELYISLFR--GIPSLVQL---FIIYFGLPQ 80

Query: 251 L-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           L    N +   T +       I  S   +A++AEI R+ L +V  GQ EA +++G+   +
Sbjct: 81  LFPSLNGLSAMTAA------IIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVGMNKAQ 134

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQAM + +P   + +++L+K++S+A A+G ++L + G  I  ++ +  E  L+
Sbjct: 135 IYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFFETFLV 194

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IY  L ++ +   ++L  K++   ++
Sbjct: 195 VGLIYWMLIVVYSWLQSQLEKKLSHSRQR 223


>gi|223043619|ref|ZP_03613664.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14]
 gi|222443107|gb|EEE49207.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14]
          Length = 485

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 61/80 (76%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL + +  + V++PQA+++I+P L ++
Sbjct: 360 IALIINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYIQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G ++++
Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439



 Score = 40.0 bits (92), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y +  + G  NT  ++  G+I  +I+G  +   +++  K ++W+  +Y+E  R  P L
Sbjct: 275 TKYGSFFIKGIKNTILISLVGVILGSILGAFIALLKINKFKPLSWLASIYIEFLRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|167617347|ref|ZP_02385978.1| glutamine ABC transporter permease protein [Burkholderia
           thailandensis Bt4]
 gi|257141204|ref|ZP_05589466.1| glutamine ABC transporter permease protein [Burkholderia
           thailandensis E264]
          Length = 218

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 23/208 (11%)

Query: 177 SFPTLTMDTNAKIFVF------SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + P LT      +F+        F++G++  +F     R +       L  +YI   LI 
Sbjct: 11  ALPDLTDGVRLTVFIAFFGLAGGFLVGMIAGMF-----RAYGPAALNVLTQVYIE--LIR 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V +     L+F  P+L      G         +  +A++  + A++AE+VR  L+
Sbjct: 64  GTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAYLAEVVRGALL 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+G  EA +A+GL+  +    ++ P A R +I PL +Q +  LK++SL + +G  +L 
Sbjct: 114 SIPKGVTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELT 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
             G  II    QA+EI      IYL+L+
Sbjct: 174 RKGQEIIAGNFQAVEIWTAVAAIYLALT 201


>gi|163841189|ref|YP_001625594.1| glutamine transport permease protein [Renibacterium salmoninarum
           ATCC 33209]
 gi|162954665|gb|ABY24180.1| glutamine transport permease protein [Renibacterium salmoninarum
           ATCC 33209]
          Length = 357

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 68/104 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+  + A++ EIVR GL +V  GQ+EA+ +LGL +  + R V++PQA + + P L +Q
Sbjct: 234 LTLALNSGAYVTEIVRGGLQSVDPGQLEASRSLGLGYLTSMRKVVVPQAFKIMTPSLINQ 293

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            + LLK+SSL +A+GFA+L+  G  I + + +  E +LI   +Y
Sbjct: 294 LVILLKDSSLLMAIGFAELLYQGQQIYSNSFRISETLLIVAVMY 337


>gi|187927129|ref|YP_001897616.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|309780168|ref|ZP_07674919.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|187724019|gb|ACD25184.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|308920871|gb|EFP66517.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 217

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 243 QLHFDKPVLGQF--NFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           QL  + P+L Q    F G S    E   + +  I L+ YT+A++AE+ R  + A+PRGQ 
Sbjct: 59  QLFQNTPLLMQMFIVFFGASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQW 118

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA+ +L + + +  R V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + 
Sbjct: 119 EASSSLAMGYFQQMRHVVLPQAVRLSIAPTVGFSVQIVKGTAVASIIGFEDLSKLGSVLA 178

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           N T Q   I  +    Y +L   ++L+ + L  K+
Sbjct: 179 NATFQPFLIYGLVAIGYFALCWPLSLYASHLEKKL 213


>gi|330903629|gb|EGH34201.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 130

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 59/81 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + 
Sbjct: 34  IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGIVNT 93

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 94  FIALFKDTSLVIIIGLFDLLN 114


>gi|170745094|ref|YP_001766551.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170658695|gb|ACB27749.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 227

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 89/162 (54%), Gaps = 13/162 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL   Y+  + I G PTL+ +   + ++F  P +G         +SP    + IAL   
Sbjct: 61  RALASFYV--WFIRGTPTLIQV---FIVYFGMPQIG-------VKLSPVTAGI-IALGVS 107

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AE +R+GL A+PRGQ+E+A+ALG+  R     ++LPQ  R I+P LT++ ++ +K
Sbjct: 108 SGAYVAETIRAGLAAIPRGQVESALALGMNPRIMMVRIVLPQVFRMILPSLTNEAISAVK 167

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           N+SL   +   +L      +I  T +  +  +    IYL L+
Sbjct: 168 NTSLLSTITVVELTLYAQLMIATTFRPFDFYIAAALIYLGLT 209


>gi|76801537|ref|YP_326545.1| glutamine/glutamate/polar amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76557402|emb|CAI48979.1| ABC-type transport system permease protein II 1 (probable
           substrates glutamine/glutamate/polar amino acids)
           [Natronomonas pharaonis DSM 2160]
          Length = 262

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 97/180 (53%), Gaps = 14/180 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIG---GSTVSPEF-------MSLYIALSCYT 277
           L+ G P +VL+ L +      P  G   F     G+T  PEF        +  +AL   +
Sbjct: 79  LLRGTPIVVLMVLFF-FGLPLPDPGDITFSSITLGNTTIPEFSVGFEAFFAAMLALGLRS 137

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +++ R  + ++  GQ+ AA ++GL+  +A R V++PQA+R  +P   +++  +LK+
Sbjct: 138 AAYQSQVFRGAIQSIDEGQVAAARSVGLSKYEAIRHVVVPQALRRSVPGFQNEFTIVLKD 197

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +S+A A+G A+L++ G  +  Q GQ+   +E+IL    IY  L+      ++ L+   A+
Sbjct: 198 TSIAFAIGLAELLTRGYDLFTQPGQSTAVLEVILAVSLIYFVLTFTTNRALDALSDYYAI 257


>gi|158313074|ref|YP_001505582.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EAN1pec]
 gi|158108479|gb|ABW10676.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EAN1pec]
          Length = 290

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 16/169 (9%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ GLP L+LI   Y      P LG  N          F +L I L+ Y  A ++EI R+
Sbjct: 109 MLRGLPLLMLIFFAY---LGLPQLG-INL-------SAFWALVIGLTAYNGAVLSEIFRA 157

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQ EAA ALGL   +   L+  PQA+R + P L SQ + LLK++SL   +G+ 
Sbjct: 158 GIQSIDKGQTEAAAALGLRGTQIFTLIQFPQAVRRMSPTLVSQLVTLLKDTSLGFVIGYT 217

Query: 348 DLVSVGGTIINQTGQ----AIEIILIWMFIYLSLSI-MIALFMNRLNAK 391
           +L+  G + +   G      +  +L  M+I ++ S+ + A ++ R  A+
Sbjct: 218 ELLRQGRSAVEFLGGRYALPVYTVLAVMYIIVNFSLSLTARWLERRQAR 266



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G ++T   A +GM+ A  +GT +   R S  +LV+      VE+ R +P L++IFF Y
Sbjct: 66  GLLDTLRAAATGMVLAVAVGTALAFARQSNRRLVSIPATAVVEMLRGLPLLMLIFFAY 123


>gi|238917322|ref|YP_002930839.1| polar amino acid transport system substrate-binding protein
           [Eubacterium eligens ATCC 27750]
 gi|238872682|gb|ACR72392.1| polar amino acid transport system substrate-binding protein
           [Eubacterium eligens ATCC 27750]
          Length = 510

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 78/132 (59%), Gaps = 1/132 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T +  F ++ I  +   AA+ AEI R G+ ++P+GQ EAA  LG +  +    ++ PQ +
Sbjct: 376 TATYRFYAVIIGFALNYAAYFAEIYRGGIESIPKGQYEAAEVLGYSKVQTFWKIIFPQMV 435

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + ++PP+T++ + L+K++SLA A+ + ++ ++   +   T   + + +  +F Y+  + +
Sbjct: 436 KRVLPPVTNEVITLVKDTSLAFALAYTEMFTLAKQVAASTASIMPLFIAGLFYYI-FNFL 494

Query: 381 IALFMNRLNAKI 392
           +A+ M +L  ++
Sbjct: 495 VAMVMEKLEKRM 506


>gi|145632443|ref|ZP_01788178.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 3655]
 gi|145634237|ref|ZP_01789948.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittAA]
 gi|229846111|ref|ZP_04466223.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 7P49H1]
 gi|144987350|gb|EDJ93880.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 3655]
 gi|145268681|gb|EDK08674.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittAA]
 gi|229811115|gb|EEP46832.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 7P49H1]
          Length = 238

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 19/205 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I   + + +  P
Sbjct: 45  FFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQI---FIIFYGLP 99

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+
Sbjct: 100 EVG-------ITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQ 151

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V     N T    E ILI
Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQ---NITAANYEFILI 208

Query: 370 W---MFIYLSLSIMIALFMNRLNAK 391
           +     IY     +++   +RL  +
Sbjct: 209 YSEAALIYWIFCFVLSFLQDRLEIR 233


>gi|124022918|ref|YP_001017225.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           MIT 9303]
 gi|123963204|gb|ABM77960.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9303]
          Length = 342

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 72/117 (61%), Gaps = 3/117 (2%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE VR GL A+PR Q EAA  LGL+ ++  +LV+LPQA+R+ +P LT+Q + LL+N+S
Sbjct: 217 YIAEDVRGGLQAIPRTQREAAAVLGLSPKQMIQLVVLPQALRTALPALTNQAVGLLQNTS 276

Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   +G  +L+ +  +++      G+ +E+ +    +Y  +   +AL    L  +++
Sbjct: 277 LMAILGLVELLGISRSLLANPDFIGRYLEVYVWLAGVYWLVCTAMALLARHLEHQLS 333


>gi|118589036|ref|ZP_01546443.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118438365|gb|EAV44999.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 367

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 60/87 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL       L++LPQA++ +I
Sbjct: 229 KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILPQALKLVI 288

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351
           P + + ++ L K+++L + VG  DL+ 
Sbjct: 289 PGIVNTFIGLFKDTTLVLIVGMFDLLG 315


>gi|89056451|ref|YP_511902.1| amino acid ABC transporter permease [Jannaschia sp. CCS1]
 gi|88866000|gb|ABD56877.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Jannaschia sp. CCS1]
          Length = 251

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 80/124 (64%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +  I+EI R+G+ AV  GQ EAA ++G++  +  R ++LPQ++R ++PP+  +
Sbjct: 127 LTLAVFHSVLISEIFRAGINAVATGQWEAAKSIGMSQGQTYRYIILPQSVRFMLPPMFGE 186

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
            ++L+K+S++   +  A+L ++G  II+ T  + EI      +Y+++++++++   F+ R
Sbjct: 187 VVHLIKSSAIVSVIAVAELTTIGRNIISDTFLSFEIWFTVALVYMAITLILSVGVSFLER 246

Query: 388 LNAK 391
             A+
Sbjct: 247 RYAQ 250


>gi|38347925|ref|NP_941174.1| glutamine ABC transporter permease protein [Serratia marcescens]
 gi|152973763|ref|YP_001338802.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|38259402|emb|CAE51629.1| membrane transport system permease protein [Serratia marcescens]
 gi|150958545|gb|ABR80572.1| hypothetical protein KPN_pKPN5p08192 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 73/116 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++ RG  EA++A+GL+ R     V++P A+R +IP L +Q++  +K
Sbjct: 100 SGAYIAEITRGAILSINRGFKEASLAMGLSQRATLWHVIMPLALRRMIPALGNQWIISIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL + +G A+L   G  II    +A+E+      IYL++++ ++  + +L  +I
Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVALIYLAVTLCLSFLLKQLEKRI 215


>gi|327438995|dbj|BAK15360.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 219

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 71/119 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S  T A+ +E +R+ ++A+P+GQ EAA +LG+T+ +  R V+ PQ +R  +PP+ + 
Sbjct: 94  ITFSLNTGAYASESIRASILAIPKGQWEAAESLGMTYWQMMRRVIAPQTVRISLPPVAND 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++++K +SL  ++  ADL  VG  I  +T + + I  +   IYL    ++ +   RL 
Sbjct: 154 FIDMVKGTSLVASITLADLFMVGQQITARTYEPLMIYSLCAVIYLIFISVLMVIQGRLE 212


>gi|154253426|ref|YP_001414250.1| polar amino acid ABC transporter inner membrane subunit
           [Parvibaculum lavamentivorans DS-1]
 gi|154157376|gb|ABS64593.1| polar amino acid ABC transporter, inner membrane subunit
           [Parvibaculum lavamentivorans DS-1]
          Length = 369

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 64/91 (70%), Gaps = 1/91 (1%)

Query: 262 VSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           V+P+  +   + ++ +++A++AE+VR GL A+P GQ EAA A+GLT+ +A   V+LPQA+
Sbjct: 227 VNPDNLLRCLVGVALFSSAYMAEVVRGGLQAIPAGQYEAARAVGLTYWQAMGQVVLPQAL 286

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           R +IP + + ++ L K+++L + VG  DL+ 
Sbjct: 287 RHVIPGIVNTFIGLFKDTTLVLIVGIFDLLG 317


>gi|322386191|ref|ZP_08059824.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269771|gb|EFX52698.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 228

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 6/166 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCY---TAAFIAEIVRSG 288
           P ++LI   Y L     +L QF    GS V   +F  LY A   Y   T   ++EI+RS 
Sbjct: 64  PPILLILFFYSLF--PSLLNQFFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D
Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++     + + Q  E  L+   IYL +  +I      L  + AL
Sbjct: 182 ITALAKVEASHSYQYSESYLVIFVIYLIICGLIQWMFRSLEKRYAL 227


>gi|303248477|ref|ZP_07334735.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302490097|gb|EFL50017.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 253

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 25/150 (16%)

Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSC 275
           LY+  F   G P LV I + Y      +H D P V+G                  + L+ 
Sbjct: 87  LYVGAFR--GTPLLVQILIFYFCVGVVIHVDSPYVIGT-----------------VTLAF 127

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           ++ A+I+E+VR+G+ ++  GQ E A++ GLTHR+    V+ PQA+R I+PP+T Q+++ +
Sbjct: 128 FSGAYISEMVRAGVESIDVGQWETALSSGLTHRQTLFYVIFPQAIRRIVPPVTGQFVSCI 187

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           K+SSL   +   +L      + + T +  E
Sbjct: 188 KDSSLLSVISVRELTKAAEVVNSTTYKTFE 217


>gi|261400795|ref|ZP_05986920.1| amino acid ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
 gi|269209397|gb|EEZ75852.1| amino acid ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
          Length = 219

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  
Sbjct: 92  ALVFLGASYMAEAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANI 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+  AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +
Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211

Query: 392 I 392
           I
Sbjct: 212 I 212


>gi|222106503|ref|YP_002547294.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737682|gb|ACM38578.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 216

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 7/133 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ +I R G+ AVP+GQ EAA ALGL +    + V+LPQA +  +P
Sbjct: 85  WIAVAIAFTLHASAFLGDIWRGGIQAVPKGQTEAAKALGLHYGSIMKDVVLPQAFKVSLP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  VGF +L   G  + NQT + + +  I   IY  +   ++L+ 
Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTFRPLTVFAIVGIIYFLICWPLSLWG 204

Query: 386 NRLNAKIALKEKK 398
            R       KEK+
Sbjct: 205 AR-------KEKR 210


>gi|330878513|gb|EGH12662.1| putative ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 506

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 14/209 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +V S VLG +L+L A + S        KA    YI  +L   LP LVL+   Y L    P
Sbjct: 32  WVISIVLGFILAL-AKQSSVPLINLPAKA----YI--WLFRSLPLLVLLIFVYNLPQAFP 84

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                     + ++  F +  IA+     A++AEI R GL+++ +GQ EAA ALGL    
Sbjct: 85  A-------TSAVLANPFWAGLIAMVMCETAYVAEIHRGGLLSIAKGQTEAARALGLRFVG 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQA+R  +P LT++Y++++K SSL   +   +++ VG  + +Q    +E +  
Sbjct: 138 TQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMAA 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             F Y+ +  +    + RL   + + ++K
Sbjct: 198 VAFYYVLVVTVFDFLLKRLERHLDVTQRK 226


>gi|328555067|gb|AEB25559.1| YtmL [Bacillus amyloliquefaciens TA208]
 gi|328913424|gb|AEB65020.1| polar amino acid transport system permease protein [Bacillus
           amyloliquefaciens LL3]
          Length = 240

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 12/183 (6%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY-- 276
           L  LYIS F   G P +V +   + + +  P L     I  S + P    LY A++ Y  
Sbjct: 56  LAKLYISFFR--GTPIMVQL---FIVFYGIPALTALGGIDTSKMDP----LYAAIATYAL 106

Query: 277 -TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            +AA  AEI+R G+ +V  GQ EAA+++GL   +  R ++LPQA+    P + +  +  L
Sbjct: 107 SSAARAAEIIRGGVNSVDAGQTEAALSIGLNGGQTFRRIILPQALLQAFPNIGNMVIGFL 166

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K++SLA ++G  D+   G T+I  +  ++E+ +    +Y + +++          +I   
Sbjct: 167 KDTSLAFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLYYAAALLFECVFRWAEKRIKKD 226

Query: 396 EKK 398
           E +
Sbjct: 227 ETR 229


>gi|332163538|ref|YP_004300115.1| putative amino acid transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318608044|emb|CBY29542.1| glutamate transport membrane-spanning protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325667768|gb|ADZ44412.1| putative amino acid transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 251

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 106/216 (49%), Gaps = 11/216 (5%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   + S + G+  ++  T L        G    +L         +P ++
Sbjct: 17  TFPDGPLGGAALTLLISLLAGVASAILGTALGVALAMSRGVWAAVLAAVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+  GQ
Sbjct: 77  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIVAIGAGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            N++    +E+ L    +Y  L + + L  N LN +
Sbjct: 187 NNRSMVYPMEVFLFVALVYFVLCLTLDLLANGLNRR 222


>gi|310643432|ref|YP_003948190.1| amino acid abc-type transporter, permease component [Paenibacillus
           polymyxa SC2]
 gi|309248382|gb|ADO57949.1| Amino acid ABC-type transporter, permease component [Paenibacillus
           polymyxa SC2]
          Length = 222

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 77/135 (57%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+ P F++  I  +    A+ +EI+R+ +I++  GQ EA  +LG+T  +  R ++LPQ
Sbjct: 84  GITLDP-FIASVIGFTLSVGAYSSEIMRAAIISIQEGQWEAGYSLGMTRWQVLRRIVLPQ 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +PPL + +++L+K++SLA  + + ++      I+  T + + +      IYL  S
Sbjct: 143 ASRVSVPPLANSFISLVKDTSLAATITYVEMFRTANQIVATTYEPLLVYTEAGVIYLLFS 202

Query: 379 IMIALFMNRLNAKIA 393
            ++ +  N L  +++
Sbjct: 203 TILTVLQNYLEKRLS 217


>gi|184155297|ref|YP_001843637.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
 gi|183226641|dbj|BAG27157.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
          Length = 223

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 32/210 (15%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHF 246
           F  ++G V  +  T  SR       + +  LY+  F I  +PT+VL+ L Y     QLH 
Sbjct: 35  FGLIVGTVFGVLRTTKSRVL-----RFILRLYLEIFRI--IPTVVLLFLAYYILPRQLHI 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P               ++M++ +A S + AA  ++IVR  + +VP+ Q E+ +A+GLT
Sbjct: 88  NMP--------------ADWMAV-LAFSLWVAAEFSDIVRGAIQSVPQHQRESGLAIGLT 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +LLPQAM+  +P   +    ++K +SL + +   D+++VG  II         
Sbjct: 133 RFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNSTYPT 192

Query: 367 ILIWM-----FIYLSLSIMIALFMNRLNAK 391
            + W+     F+Y  +  +++L+  +L A+
Sbjct: 193 GVFWVYGLIFFLYFIVDYLLSLWARKLTAR 222



 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 41/68 (60%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S  + ++ G   + W+A   +    I+GT+ G  R + ++++ +I R+Y+E+FR IP 
Sbjct: 11  EGSNFSRLMGGLWVSAWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPT 70

Query: 142 LVVIFFLY 149
           +V++F  Y
Sbjct: 71  VVLLFLAY 78


>gi|330941854|gb|EGH44591.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 117

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 67/114 (58%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L
Sbjct: 3   VSEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTL 62

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 63  LSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 116


>gi|323339948|ref|ZP_08080215.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
 gi|323092590|gb|EFZ35195.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
          Length = 482

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 23/158 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L                       GS + P F++  I L   
Sbjct: 328 RGLPLIVLALFIYNGIPSLT----------------------GSKI-PAFVAGVITLMLN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IA  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 365 EGAYIAAFVKGGIEAVDSGQMEAARSLGLPFGKAMRKVVLPQGIKIMIPSFINQFIITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++S+   +G  +L   G  II +  +   +  I   IY
Sbjct: 425 DTSILSVIGLLELTQTGKIIIARNLEGFRVWTIVAVIY 462


>gi|301067875|ref|YP_003789898.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|300440283|gb|ADK20049.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
          Length = 474

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 34/189 (17%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG-------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           F+ V+GI++ L    L   F            + LPLL ++ F+  G+P+L+        
Sbjct: 289 FATVVGILVGLLGV-LPNQFARGVATTFIYIFRGLPLLVLALFIYTGVPSLI-------- 339

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         GS + P F++  I L+    A+ A  V+ G+ AV  GQMEAA +LG
Sbjct: 340 --------------GSKI-PAFVAGIITLTLNEGAYTAAFVKGGIQAVDDGQMEAARSLG 384

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L   G  II +    +
Sbjct: 385 LPFGKAMRRVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARN---M 441

Query: 365 EIILIWMFI 373
           E   IW  +
Sbjct: 442 EGFKIWTMV 450


>gi|239820264|ref|YP_002947449.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805117|gb|ACS22183.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 264

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 71/123 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ Y  AF +EIVR G+I++  GQ EA  ALG+T  +  R +LLPQA + ++PPL SQ
Sbjct: 139 LCLTLYGGAFYSEIVRGGIISIEAGQTEAGKALGMTRLQLLRRILLPQAFKKMVPPLMSQ 198

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  LKN+SL   +   DL+  G  I + T + +E+       Y ++ + I ++  R+  
Sbjct: 199 SIMQLKNTSLLSVLAVPDLLYQGQVIAHDTYRPLELYTFIAIAYFAVLLPITIWAKRMEY 258

Query: 391 KIA 393
            +A
Sbjct: 259 GVA 261


>gi|183597013|ref|ZP_02958506.1| hypothetical protein PROSTU_00245 [Providencia stuartii ATCC 25827]
 gi|188023669|gb|EDU61709.1| hypothetical protein PROSTU_00245 [Providencia stuartii ATCC 25827]
          Length = 250

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 110/207 (53%), Gaps = 23/207 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL---YISTF-----LIFGLPTLVLIALKYQLHFD 247
           L +++SL A  +S  F    G AL +L   +++ F         +P ++LI   Y   F 
Sbjct: 28  LTLIISLVAGAMSIVFGTLGGVALAMLRGFWMNLFAAVLGFFRAIPVIMLIFWTY--FFL 85

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             VLG        T  P   S+  AL+  T+A++A  V++G++A+ +GQ +A ++LG + 
Sbjct: 86  PVVLG--------TEIPGIASVICALALITSAYLAHAVKAGILAIGKGQWQAGLSLGFSR 137

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEI 366
            +    ++LPQA+R ++P   +Q++ L+K++SLA  VG A+L  +   + N +    +EI
Sbjct: 138 WQVLWQIVLPQALRMMVPSFINQWVALIKDTSLAYIVGVAELSFLATQVNNREMVYPLEI 197

Query: 367 ILIWMFIY----LSLSIMIALFMNRLN 389
            L   FIY    L+L I+  L   RL+
Sbjct: 198 FLFVAFIYFVICLTLEIVANLIAKRLS 224


>gi|315122482|ref|YP_004062971.1| amino acid ABC transporter (permease) [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495884|gb|ADR52483.1| amino acid ABC transporter (permease) [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 239

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 77/132 (58%), Gaps = 10/132 (7%)

Query: 271 IALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           I L C++A          A+I+EI+RS ++++P+GQ +AA ++GLT ++  R ++LPQ +
Sbjct: 85  IVLDCFSAIVISFTLNFSAYISEIIRSSILSIPKGQWDAAYSIGLTRQQTIRHIILPQIV 144

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
                PL+S+++++LK++SLA  V   ++      I++ T Q + I      IYL L+  
Sbjct: 145 VISAAPLSSEFISILKSTSLASTVTLPEIFQTAQRIVSTTYQPLIIYCEIAIIYLILTSF 204

Query: 381 IALFMNRLNAKI 392
             +   ++ +K+
Sbjct: 205 CYIIQMKIESKL 216


>gi|261217290|ref|ZP_05931571.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261320161|ref|ZP_05959358.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|260922379|gb|EEX88947.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261292851|gb|EEX96347.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
          Length = 250

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA  +G++ R+A    +LPQA R+ +P
Sbjct: 113 FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYFIGMSWRQALIRTILPQATRTAVP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 173 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 232

Query: 386 NRLNAK 391
            RL  +
Sbjct: 233 VRLERR 238


>gi|170748629|ref|YP_001754889.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170655151|gb|ACB24206.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 245

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)

Query: 259 GSTVSPEFMSL--YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           G+   P + SL  +  L+ Y  A+IAE +R+G+ AV   Q EAA+ALGL   +A R ++L
Sbjct: 103 GALRWPAYESLAGFCGLALYAGAYIAEELRAGIGAVRSTQREAALALGLAPVQAFRHIVL 162

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R    P+  QYLN LKN+SL + +G A+L      +  +T +  +   I   +Y+ 
Sbjct: 163 PQALRVAWLPIVGQYLNTLKNTSLTMTIGLAELSYASRQVETETFETFQAFGIATLLYVG 222

Query: 377 LSIMI 381
            +  +
Sbjct: 223 AAAAV 227


>gi|139437313|ref|ZP_01771473.1| Hypothetical protein COLAER_00452 [Collinsella aerofaciens ATCC
           25986]
 gi|133776960|gb|EBA40780.1| Hypothetical protein COLAER_00452 [Collinsella aerofaciens ATCC
           25986]
          Length = 436

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 78/122 (63%), Gaps = 1/122 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++  ++A++ EI R+G+ ++P+GQ EAA +LG+   +    V++PQ  R+++P LTS+
Sbjct: 287 IVMAMNSSAYLCEIFRAGIQSIPKGQNEAARSLGMNAFQTLLYVMIPQTFRNVLPTLTSE 346

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L K++SL  AVG  ++V    TI+  TG     ++  +F YL +++ +A  ++ L A
Sbjct: 347 FILLYKDTSLLAAVGVVEIVMNARTIVATTGSITPYVVAALF-YLVITLPLARLVSGLEA 405

Query: 391 KI 392
           ++
Sbjct: 406 RL 407


>gi|305432078|ref|ZP_07401245.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|304445162|gb|EFM37808.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 272

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 73/119 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS ++AA+++EI R+G+++VP  Q+E+A ALGL+ R+    ++ PQA+++I+ P++ Q  
Sbjct: 151 LSMFSAAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIKNILAPISGQLA 210

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           NL+K+SSL   +   +L      + +     +E  ++  F YL L++ I +F   L  K
Sbjct: 211 NLIKDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILTLPIGVFSRYLERK 269


>gi|228478305|ref|ZP_04062913.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|312863121|ref|ZP_07723359.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|322517165|ref|ZP_08070048.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
 gi|228249984|gb|EEK09254.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|311100657|gb|EFQ58862.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|322124224|gb|EFX95740.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 226

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 15/161 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250
           F  +LG+++SL     ++    K  + L  LY+  F   G P +V I + + L H + P 
Sbjct: 30  FGTILGVLVSL-----AKRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + QF  +    S + P      I LS  + A+I+E VR+G+ ++P+GQ+EAA +LG+   
Sbjct: 83  V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQVEAAYSLGIRPW 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
              R V+LPQA+++I+P L ++++ ++K+SSL   +G  +L
Sbjct: 138 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 178


>gi|269956044|ref|YP_003325833.1| polar amino acid ABC transporter inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
 gi|269304725|gb|ACZ30275.1| polar amino acid ABC transporter, inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
          Length = 294

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 76/119 (63%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A IAE+VRSG++ +PRGQ EA ++LGLT  +  R + LPQA+ +++P + SQ + +LK
Sbjct: 151 NGAVIAELVRSGVVNLPRGQSEAGLSLGLTQGQTLRSIQLPQALIAMLPAVISQLVVVLK 210

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +S+L   +G+ DL+     + +  G  ++ + +   +++ +++ ++   +RL+ +++ +
Sbjct: 211 DSALGQLIGYTDLLRSAQVLASGGGNPLQTLFVVAVLFILVNMGLSWVAHRLSRRLSSR 269



 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 64  LSERAGFEIDQGIVPYTSDS-SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           L++R   ++D G+    +D+ ++    L G  NT   A    + A + G L G GRLS  
Sbjct: 40  LAQRG--QLDAGLWRTATDARAWEFYYLPGLRNTLQAAAVATVGAVLFGVLFGMGRLSHL 97

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFL 148
           + V WI  V VE FR +P L+++ FL
Sbjct: 98  RAVRWISSVVVEFFRAVPVLLMMVFL 123


>gi|126737044|ref|ZP_01752779.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Roseobacter sp. SK209-2-6]
 gi|126721629|gb|EBA18332.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Roseobacter sp. SK209-2-6]
          Length = 432

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 80/136 (58%), Gaps = 4/136 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ ++AA+IAE++R GL A+P GQ EAA +LGL + +A RL++LPQA++  IP
Sbjct: 297 FLRVVIMITLFSAAYIAEVIRGGLAALPTGQYEAADSLGLDYPQAMRLIILPQALKISIP 356

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381
            + +  + L K+++L   +   DLV  + G I+  T   G   E++    F++  +   I
Sbjct: 357 GIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFIVCYGI 416

Query: 382 ALFMNRLNAKIALKEK 397
           + +   L  ++A   +
Sbjct: 417 SQYSQWLERRLATGHR 432



 Score = 39.7 bits (91), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
            GF I +G       SS  +  L GF+    L  + +  +  +G  +  GR S+  L+ W
Sbjct: 200 GGFLIPEGASENAMLSSVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSSMPLIKW 259

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           IC +++E  R + PL+ + F+   +LS    PD ++ L
Sbjct: 260 ICVIFIEFVRGV-PLITLLFVASVMLSYFFPPDATVDL 296


>gi|238787848|ref|ZP_04631645.1| ABC-type amino acid transport system permease component [Yersinia
           frederiksenii ATCC 33641]
 gi|238724191|gb|EEQ15834.1| ABC-type amino acid transport system permease component [Yersinia
           frederiksenii ATCC 33641]
          Length = 248

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G++A+  GQ +A ++LG    +    V+LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLD 213

Query: 383 LFMNRLNAK 391
           L  N LN +
Sbjct: 214 LLANALNRR 222


>gi|322832387|ref|YP_004212414.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167588|gb|ADW73287.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 237

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 88/172 (51%), Gaps = 22/172 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  + G+VL+L      +    + G  L   Y+  +L  G P L      +Q+ F   VL
Sbjct: 32  FGIIAGLVLALL-----QESRFRAGSVLAFFYL--WLFRGTPVL------FQIIFVYNVL 78

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F     +     F    +ALS    A++AEI+RSGL AV  GQ  A +ALG+T  +  
Sbjct: 79  PTFGLRFSA-----FTCAVMALSLNEGAYMAEILRSGLQAVRSGQRTAGMALGMTQSQIM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           R ++LPQA R ++PP+ +Q +++LK+S+L   +   +L+     I NQT  A
Sbjct: 134 RKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELL----LIANQTASA 181


>gi|238019791|ref|ZP_04600217.1| hypothetical protein VEIDISOL_01666 [Veillonella dispar ATCC 17748]
 gi|282849422|ref|ZP_06258807.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|294794721|ref|ZP_06759856.1| probable amino-acid permease protein YxeN [Veillonella sp. 3_1_44]
 gi|237863315|gb|EEP64605.1| hypothetical protein VEIDISOL_01666 [Veillonella dispar ATCC 17748]
 gi|282581126|gb|EFB86524.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|294454083|gb|EFG22457.1| probable amino-acid permease protein YxeN [Veillonella sp. 3_1_44]
          Length = 238

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 11/173 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++P + +   + +GLP L L AL+ Q     P            V   F+++ + L+ +
Sbjct: 65  RSIPNMVLLYLVYYGLPILFL-ALEDQTGVHVPF---------EKVPATFVAV-VGLTLH 113

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EI R+ L +VP+GQMEAA A+G+T  +A R ++LPQA    +P  T+Q+LN +K
Sbjct: 114 TGAYLSEIFRAALQSVPKGQMEAAQAIGMTWFQAFRRIVLPQATVFALPLFTNQFLNTMK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++S+   +   +L         +  Q  E  ++   ++  + I+     +RL 
Sbjct: 174 STSIVFVITVIELFGAAKLYTEENSQYFEAYIVVAGLFWVMGIVFEFIFHRLE 226


>gi|222080908|ref|YP_002540271.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725587|gb|ACM28676.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 238

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 89/178 (50%), Gaps = 17/178 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F  G VL+L  T +S  F    G  + LL  +        TLV +     L    PVL 
Sbjct: 14  AFFHGAVLTLLITIVSLFFGIIVGLVIALLQETELRAVKAATLVYL----WLFRGTPVLF 69

Query: 253 QFNFIGGSTVSPEF-------MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           Q  FI    V P F       +S  +ALS    A++AEI+RSGL AV +GQ  A +ALG+
Sbjct: 70  QIIFI--YNVLPGFGIRLSAILSAVLALSLNEGAYMAEILRSGLHAVKKGQRTAGLALGM 127

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           T     R V++PQA R ++P + +Q + +LK S+L   V   +L+ V     NQT  A
Sbjct: 128 TRASVMRFVVMPQAARIVLPAVGNQMIGMLKTSALVSVVAVEELLLVA----NQTASA 181


>gi|116494154|ref|YP_805888.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|116104304|gb|ABJ69446.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
          Length = 237

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 94/186 (50%), Gaps = 33/186 (17%)

Query: 193 SFVLGIVLSLFA--TRLS-------------RHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           SF +G++++L    TR+S               F+    ++ PLL     + FGLP+L++
Sbjct: 27  SFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVFFGLPSLII 86

Query: 238 IAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             +  + +  D  + G   F                 S  T A+ AE +R+ L+++  GQ
Sbjct: 87  PGIFPHGIKLDPVIAGIITF-----------------SLNTGAYCAETIRAALLSIDHGQ 129

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ++GL  R   R +++PQA+R+ +PPL++ +++L+K++SLA ++   ++  V   I
Sbjct: 130 WEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQVSQQI 189

Query: 357 INQTGQ 362
             +  Q
Sbjct: 190 AAENYQ 195


>gi|323350547|ref|ZP_08086209.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123229|gb|EFX94914.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 230

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P LT+  LNL+++
Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPAQTFLRIVLPQAFRIALPNLTTALLNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E       IY  ++++++L    L   + +K
Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228

Query: 396 EK 397
           E+
Sbjct: 229 ER 230


>gi|301799826|emb|CBW32397.1| putative glutamine transporter [Streptococcus pneumoniae OXC141]
          Length = 378

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 83/135 (61%), Gaps = 13/135 (9%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSL 269
           +  K  PL++++   ++   G P +V I + + L H + P + Q   +G      +F  L
Sbjct: 44  QCSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHINAPTI-QIGILG-----VDFSRL 97

Query: 270 Y---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA+++I+P 
Sbjct: 98  IPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPA 157

Query: 327 LTSQYLNLLKNSSLA 341
           L ++++ ++K+SSL 
Sbjct: 158 LGNEFITIIKDSSLG 172


>gi|70733845|ref|YP_257485.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348144|gb|AAY95750.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 229

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 17/214 (7%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++      +   +L I L +   R S+ ++ +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVGIAVILGLLLAIPLGI--ARSSKLWYVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +  S + P     F      ++ +TAA+IAEI+R  + A+P G
Sbjct: 71  LVYY------GLAQFDAVRDSFMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK SSLA  V   +L  +  T
Sbjct: 125 EIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMART 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           II +    +++       YL +S ++     +L 
Sbjct: 185 IIARNYLTVDMFFTAGVFYLLMSFILVQAFRQLE 218


>gi|313608296|gb|EFR84288.1| arginine transport system permease protein ArtQ [Listeria
           monocytogenes FSL F2-208]
          Length = 120

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 71/112 (63%), Gaps = 1/112 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+
Sbjct: 3   AAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKD 62

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           SSL   +G  DL+  G   +++    I ++L+ + IYL+L+ ++ +   +L 
Sbjct: 63  SSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAV-IYLALTAILTVLFKQLE 113


>gi|295706522|ref|YP_003599597.1| arginine ABC transporter permease ArtQ [Bacillus megaterium DSM
           319]
 gi|294804181|gb|ADF41247.1| arginine ABC transporter, permease protein ArtQ [Bacillus
           megaterium DSM 319]
          Length = 223

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 37/176 (21%)

Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +  FVLG++LSL   ++SR+         +    +  PL+     + FGLP L       
Sbjct: 35  ILGFVLGVILSL--CKISRNKPLQWFADAYTSVFRGTPLVLQLLLIYFGLPQL------- 85

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L FD           G                 +AA+I+EI+R+G++AV +GQ EAA+A
Sbjct: 86  -LGFDIAPFPAAVAAFGLN---------------SAAYISEIIRAGILAVDKGQREAALA 129

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGG 354
           LG+ +R+    ++LPQA+++I+P L ++++ L K S++   +G  D++     VGG
Sbjct: 130 LGIPYRRMMGQIILPQALKNILPALMNEFITLTKESAIVTVIGALDIMRRAYIVGG 185


>gi|294501175|ref|YP_003564875.1| arginine ABC transporter permease ArtQ [Bacillus megaterium QM
           B1551]
 gi|294351112|gb|ADE71441.1| arginine ABC transporter, permease protein ArtQ [Bacillus
           megaterium QM B1551]
          Length = 219

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 37/176 (21%)

Query: 191 VFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +  FVLG++LSL   ++SR+         +    +  PL+     + FGLP L       
Sbjct: 31  ILGFVLGVILSL--CKISRNKPLQWFADAYTSVFRGTPLVLQLLLIYFGLPQL------- 81

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L FD           G                 +AA+I+EI+R+G++AV +GQ EAA+A
Sbjct: 82  -LGFDIAPFPAAVAAFGLN---------------SAAYISEIIRAGILAVDKGQREAALA 125

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGG 354
           LG+ +R+    ++LPQA+++I+P L ++++ L K S++   +G  D++     VGG
Sbjct: 126 LGIPYRRMMGQIILPQALKNILPALMNEFITLTKESAIVTVIGALDIMRRAYIVGG 181


>gi|282856520|ref|ZP_06265795.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyramidobacter piscolens W5455]
 gi|282585641|gb|EFB90934.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyramidobacter piscolens W5455]
          Length = 217

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 4/119 (3%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++ ++ EIVR G+  VP+GQ EAA  LGL++ +  + ++LPQA+R ++P + ++++ L+K
Sbjct: 99  SSGYVGEIVRGGIEGVPKGQWEAAKMLGLSYWQTMKSIILPQAIRHMLPAIGNEFVTLIK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMNRLNAK 391
            SSL   +  +DL  VG  + + T  + E  +    +YL L    S  + L  NR   K
Sbjct: 159 ESSLLSVLAISDLTMVGQQVRSVTYASFETFIFVALVYLVLTSVTSGALQLLENRWKVK 217


>gi|254712480|ref|ZP_05174291.1| amino acid ABC transporter, permease protein [Brucella ceti
           M644/93/1]
 gi|254715553|ref|ZP_05177364.1| amino acid ABC transporter, permease protein [Brucella ceti
           M13/05/1]
          Length = 226

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 76/126 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA  +G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYFIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++   
Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQ 208

Query: 386 NRLNAK 391
            RL  +
Sbjct: 209 VRLERR 214


>gi|330821515|ref|YP_004350377.1| amino-acid transmembrane ABC transporter protein [Burkholderia
           gladioli BSR3]
 gi|327373510|gb|AEA64865.1| amino-acid transmembrane ABC transporter protein [Burkholderia
           gladioli BSR3]
          Length = 223

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 13/187 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +F +GIV+      L+R    +   A  L Y+S  LI G+P L+ + + Y   +  P 
Sbjct: 31  VAAFAIGIVIGAL-LLLARQHGGRVAAACVLAYVS--LIRGVPALIQMLVAY---YVLPA 84

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L         T+SP   +  +AL+  TAA+I+EI+R  L ++ RGQ+ AA ALG++  + 
Sbjct: 85  LLDI------TLSP-LQAGILALALNTAAYISEILRGALHSLGRGQIPAARALGMSPVQV 137

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++ PQ     IPPLTS++  LLK SSL   +   DL +V      QT Q +++    
Sbjct: 138 WRHIVFPQLFLRSIPPLTSEFTMLLKASSLLSIIAVHDLATVARDATLQTNQPLQVFSAA 197

Query: 371 MFIYLSL 377
             +Y ++
Sbjct: 198 AAVYFAI 204


>gi|237800638|ref|ZP_04589099.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331023497|gb|EGI03554.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 220

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 72/129 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+P GQ+EA  A+GL   +  R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPPGQIEAGKAIGLRFSQTLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|229829573|ref|ZP_04455642.1| hypothetical protein GCWU000342_01670 [Shuttleworthia satelles DSM
           14600]
 gi|229791562|gb|EEP27676.1| hypothetical protein GCWU000342_01670 [Shuttleworthia satelles DSM
           14600]
          Length = 244

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 31/244 (12%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKAL-----PLLY 223
           F+N+         +    +I VF+ ++GI+L +L AT   R   +K+G+ +     P  Y
Sbjct: 16  FINDNRWQSLVSGLGVTLQITVFAVIVGILLGALVAT--VRSTWDKSGEEMGRRKSPAYY 73

Query: 224 ----------ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
                     I   +I G P +V + + Y + F             +T          A 
Sbjct: 74  LLKGFNVICKIYLTVIRGTPVVVQLMISYFIIF-------------ATSKNAVAVAIFAF 120

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              +AA++AEI+R G++++  GQ EA  +LG  + +    ++LPQ  ++++P L ++++ 
Sbjct: 121 GLNSAAYVAEIIRGGIMSIDEGQFEAGRSLGFNYPQTMIYIILPQVFKAVLPALLNEFIT 180

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K +S+A  VG  DL   G  I ++T  A   +     IYL + I++     RL  ++ 
Sbjct: 181 LVKETSVAGYVGIMDLTKAGDVIRSRTYSAFMPLFAVAGIYLVIVIILETVFGRLERRLR 240

Query: 394 LKEK 397
             E+
Sbjct: 241 QNER 244


>gi|170781634|ref|YP_001709966.1| putative glutamate permease [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156202|emb|CAQ01344.1| putative glutamate permease [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 274

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + S+  AL+ Y  A I E +RSG++ +PRGQ EA +A+GL   +   LV  PQA R+++P
Sbjct: 130 YWSVVTALTLYNGAIIGEALRSGILGLPRGQREAGLAIGLRPLQNRLLVEFPQAFRTMLP 189

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIAL 383
            + +Q + L+K+++L   V    L   G  I+  T +A  + I ++ + +YL L++ ++ 
Sbjct: 190 IIVAQLVVLIKDTALGTIVSLVGLTKQGELILEATSRANSLPIFVVMVGMYLVLNLSVST 249

Query: 384 FMNRLNAK 391
              RL  K
Sbjct: 250 IARRLARK 257


>gi|311103232|ref|YP_003976085.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 2 [Achromobacter
           xylosoxidans A8]
 gi|310757921|gb|ADP13370.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 2
           [Achromobacter xylosoxidans A8]
          Length = 220

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 70/116 (60%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  IA + + AA+ +EI+R+GL +V  GQ +AA A GL+  +A R V+LPQA+R+++P L
Sbjct: 93  SALIAFTLFEAAYYSEIIRAGLQSVRSGQWQAAAASGLSRAQALRFVVLPQALRNMMPVL 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            +Q + L +++SL   +   D ++    + N+  + IE+ L    +Y  L   ++L
Sbjct: 153 ITQAIVLFQDTSLVYVISLRDFMTSTSIVANRDNRLIEMYLFAALVYFVLCASLSL 208


>gi|307300763|ref|ZP_07580538.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306904297|gb|EFN34882.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P +++  IAL+ + +AF+ EI R  + AVP+GQ EAA ALGL + ++ R V+LPQ
Sbjct: 80  GFAINP-WIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMRHVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A R  + P     + L+K +SLA  +GF +L   G  I N T
Sbjct: 139 AARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180


>gi|238019979|ref|ZP_04600405.1| hypothetical protein VEIDISOL_01855 [Veillonella dispar ATCC 17748]
 gi|237863503|gb|EEP64793.1| hypothetical protein VEIDISOL_01855 [Veillonella dispar ATCC 17748]
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++ EI R G+ ++ RGQ E A  LG T+ +  R ++LPQ  + ++PPL ++ +NLLK+
Sbjct: 100 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKD 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SL   +   D++ +  +I+ Q    I   L+    YL  + ++    N L  + A+ E 
Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED 218


>gi|227327914|ref|ZP_03831938.1| L-amino acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 364

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+T+     +L + +  + +A++AE+VR GL A+P+GQ EAA +LGL + +   LV+LPQ
Sbjct: 222 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 280

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A++ +IP L +  ++L K++SL + +G  DL S
Sbjct: 281 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 313


>gi|227488107|ref|ZP_03918423.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227541504|ref|ZP_03971553.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227091969|gb|EEI27281.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227182786|gb|EEI63758.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 299

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 56/81 (69%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L    AA++AE+VR+GL AVP GQ EA+ ALG++  +  +  +LPQAMR IIP
Sbjct: 141 FLLACLGLGLNEAAYMAEVVRAGLQAVPEGQYEASKALGMSWWQTMKRTVLPQAMRIIIP 200

Query: 326 PLTSQYLNLLKNSSLAVAVGF 346
           P  ++ +++LK +SL VAV +
Sbjct: 201 PTGNELISMLKTTSLVVAVPY 221


>gi|220913269|ref|YP_002488578.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219860147|gb|ACL40489.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 279

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 82/135 (60%), Gaps = 4/135 (2%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           G AL LL I+   I  +P  V + L++       ++  F  +G  T SP F+++   L  
Sbjct: 84  GLALCLLRIADSPIIRIP--VRVVLEFLRGMPVVLMMLFVLLGFGT-SP-FIAVVTGLVL 139

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y AA  AEI+R+G+ ++P+GQ EA +A+GLT  ++  L+ LPQA+R ++P L +Q + LL
Sbjct: 140 YNAAVFAEIIRAGISSLPKGQREAGLAIGLTSYRSRMLIELPQAIRRMMPSLVAQMVVLL 199

Query: 336 KNSSLAVAVGFADLV 350
           K++SL   V + +L+
Sbjct: 200 KDTSLGYIVAYGELL 214


>gi|186473893|ref|YP_001861235.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196225|gb|ACC74189.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 250

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 77/135 (57%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P     Y+    +L+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  LGQFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E+
Sbjct: 138 GFSLLRRIIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEV 197

Query: 367 ILIWMFIYLSLSIMI 381
            +    IYL L+ ++
Sbjct: 198 FICAALIYLFLNFVV 212


>gi|57167897|ref|ZP_00367037.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|57021019|gb|EAL57683.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
          Length = 261

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 73/119 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS ++AA+++EI R+G+++VP  Q+E+A ALGL+ R+    ++ PQA+++I+ P++ Q  
Sbjct: 140 LSMFSAAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIKNILAPISGQLA 199

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           NL+K+SSL   +   +L      + +     +E  ++  F YL L++ I +F   L  K
Sbjct: 200 NLIKDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILTLPIGVFSRYLERK 258


>gi|330429518|gb|AEC20852.1| polar amino acid ABC transporter, inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 507

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 79/137 (57%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +S  F +  IAL     A++AEI R G+++VPRGQ EA  ALG+ +    RL+++PQA+R
Sbjct: 90  LSSPFYAGLIALVLSETAYMAEIHRGGILSVPRGQYEAGKALGIRYSGIQRLIVIPQAIR 149

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L++Q++ ++K +SL   +   +++ VG  +  Q     E +L   F Y+ +  + 
Sbjct: 150 IALPTLSNQFVTIVKLTSLVSVISLTEILLVGQRLYTQNFLIFETMLAVAFYYVLVVTLF 209

Query: 382 ALFMNRLNAKIALKEKK 398
              + RL A + + ++K
Sbjct: 210 DKVLIRLEAFLDVTQRK 226


>gi|271500964|ref|YP_003333989.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344519|gb|ACZ77284.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 219

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 77/129 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R   R V+ P A+R ++P
Sbjct: 90  FSAAVVTIMINSGAYIAEITRGSVLSIHKGFTEAGLALGLSRRDTLRHVIAPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  +
Sbjct: 150 PLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSAVL 209

Query: 386 NRLNAKIAL 394
             L  ++ +
Sbjct: 210 RWLETRLKI 218


>gi|238789895|ref|ZP_04633675.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia frederiksenii ATCC 33641]
 gi|238721968|gb|EEQ13628.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia frederiksenii ATCC 33641]
          Length = 323

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 56/81 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + +A++AE+VR GL A+P+GQ EAA +LGL + K   LV+LPQA++ +IP L + 
Sbjct: 192 VGVVLFQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNT 251

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + L K++SL + +G  DL S
Sbjct: 252 IIALFKDTSLVIIIGLFDLFS 272


>gi|29829028|ref|NP_823662.1| glutamate transporter permease [Streptomyces avermitilis MA-4680]
 gi|29606134|dbj|BAC70197.1| putative glutamate ABC transporter permease [Streptomyces
           avermitilis MA-4680]
          Length = 221

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 78/126 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YT+AF+ E +RSG+  VP GQ EAA A+GL   +   L++LPQA RS++ PLT+ 
Sbjct: 96  LGLIAYTSAFVCEALRSGINTVPVGQAEAARAIGLNFTQVLTLIVLPQAFRSVVGPLTNV 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L KN+++A A+G A+  ++   +I    Q I I  ++ F ++ L++   L +  ++ 
Sbjct: 156 LIALTKNTTVAAAIGVAEAAALMKEMIENEAQLILISAVFAFGFVCLTLPTGLILGWVSK 215

Query: 391 KIALKE 396
           K+A+K 
Sbjct: 216 KVAVKR 221


>gi|238793127|ref|ZP_04636755.1| ABC-type amino acid transport system permease component [Yersinia
           intermedia ATCC 29909]
 gi|238727500|gb|EEQ19026.1| ABC-type amino acid transport system permease component [Yersinia
           intermedia ATCC 29909]
          Length = 251

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G++A+  GQ +A ++LG    +    V+LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213

Query: 383 LFMNRLNAK 391
           L  N LN +
Sbjct: 214 LLANGLNRR 222


>gi|294793250|ref|ZP_06758396.1| probable amino-acid permease protein YxeN [Veillonella sp. 6_1_27]
 gi|313893815|ref|ZP_07827381.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|294456195|gb|EFG24559.1| probable amino-acid permease protein YxeN [Veillonella sp. 6_1_27]
 gi|313441379|gb|EFR59805.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 238

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 11/173 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++P + +   + +GLP L L AL+ Q     P            V   F+++ + L+ +
Sbjct: 65  RSIPNMVLLYLVYYGLPILFL-ALEDQTGVHVPF---------EKVPATFVAV-VGLTLH 113

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EI R+ L +VP+GQMEAA A+G+T  +A R ++LPQA    +P  T+Q+LN +K
Sbjct: 114 TGAYLSEIFRAALQSVPKGQMEAAQAIGMTWFQAFRRIVLPQATVFALPLFTNQFLNTMK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++S+   +   +L         +  Q  E  ++   ++  + I+     +RL 
Sbjct: 174 STSIVFVITVIELFGAAKLYTEENSQYFEAYIVVAGLFWVMGIVFEFIFHRLE 226


>gi|239616532|ref|YP_002939854.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505363|gb|ACR78850.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
          Length = 206

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 41/221 (18%)

Query: 188 KIFVFSFVLGIVLSL-------FATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVL 237
           K+  +S  LG++L+L       +  R+++     +E+  +++PLL I   + +G P    
Sbjct: 4   KLTFWSLGLGLILALPFSFGQVYGGRIAKGIIVVYERLFRSIPLLVILFLIFYGFP---- 59

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
              K  + F                SP F +  + L   +AA+ ++I R  + +V   QM
Sbjct: 60  ---KINVRF----------------SP-FTACILGLGLRSAAYQSQIFRGAIQSVSETQM 99

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
            AA +LG++  +  R V+LPQA+R  +P  T+++  +LK+SSLA A+G  +L+  GG II
Sbjct: 100 RAARSLGMSRLQGFRHVVLPQALRIALPGWTNEFTIVLKDSSLAYALGVTELLRQGGYII 159

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +        M IYLS++++  +    +N  +   EKK
Sbjct: 160 STKYEP-------MLIYLSVAVIYLVITLGINRGLGTVEKK 193


>gi|16262493|ref|NP_435286.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|14523098|gb|AAK64698.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P +++  IAL+ + +AF+ EI R  + AVP+GQ EAA ALGL + ++ R V+LPQ
Sbjct: 80  GFAINP-WIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMRHVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A R  + P     + L+K +SLA  +GF +L   G  I N T
Sbjct: 139 AARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180


>gi|313123036|ref|YP_004033295.1| ABC amino acid transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312279599|gb|ADQ60318.1| ABC-type amino acid transport system, permease component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|325684798|gb|EGD26950.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 247

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 104/197 (52%), Gaps = 9/197 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+LG++++L  T L R   +K G  L +  I  F ++   +  L+   + ++F  P L 
Sbjct: 39  SFILGLIIAL-VTALVR-ISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVYFGLPYLK 96

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               +        F +  I  S  T A+ +E +R+ + +VPR Q EAA ++G+   K  R
Sbjct: 97  IPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIGMNRGKTLR 156

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA++  IPPL++ ++ L+K++SLA ++   ++  V   I  +  Q        + 
Sbjct: 157 RIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQP-------LI 209

Query: 373 IYLSLSIMIALFMNRLN 389
           +Y  ++++ ALF + L+
Sbjct: 210 MYSLVALVYALFCSVLS 226


>gi|296111776|ref|YP_003622158.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295833308|gb|ADG41189.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 213

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IA     AA++AEI R GL +VPRGQ +AA  LG T  +    ++LPQ ++ +
Sbjct: 82  PRFEAAVIAFIINYAAYLAEIFRGGLQSVPRGQYDAARVLGFTRTQTFFKIVLPQVIKIV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   ++ +NL+K++SL   +G  D++  G    ++    +  +L+ + IYL ++ ++ +
Sbjct: 142 VPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRDVTLVPYLLVGL-IYLLMTAIVTV 200

Query: 384 FMNRLNAKI 392
            + R   ++
Sbjct: 201 LLRRSEKRL 209


>gi|313897815|ref|ZP_07831356.1| arginine ABC transporter, permease protein ArtQ [Clostridium sp.
           HGF2]
 gi|312957350|gb|EFR38977.1| arginine ABC transporter, permease protein ArtQ [Clostridium sp.
           HGF2]
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 103/198 (52%), Gaps = 28/198 (14%)

Query: 201 SLFATRLSRHFHEKTGKALPL-----LYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQF 254
           ++F  R+++ F+      + L     +Y+  F I FG+P+LV            P L   
Sbjct: 40  TVFLRRMNKVFNLIVAAYIDLFRGTPVYVQMFFIYFGIPSLV------------PGLNIN 87

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N++ G  V           S  + A+++EI+R+G+  + +GQ+EAA ALG++ +   + +
Sbjct: 88  NWVAGILV----------FSLNSGAYMSEIMRAGIDGIDKGQIEAAKALGVSGKDIGKDI 137

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQA R+++P + ++++ L K +S+   +G  D++     + NQT    E +LI   +Y
Sbjct: 138 IIPQAFRNVLPAVINEFITLTKETSIVSVIGLHDMMYWFYAVKNQTYADFEPLLIVFLVY 197

Query: 375 LSLSIMIALFMNRLNAKI 392
             ++ +++L    +  K+
Sbjct: 198 YIMNKVLSLIGKAIERKL 215


>gi|269797367|ref|YP_003311267.1| polar amino acid ABC transporter inner membrane subunit
           [Veillonella parvula DSM 2008]
 gi|269093996|gb|ACZ23987.1| polar amino acid ABC transporter, inner membrane subunit
           [Veillonella parvula DSM 2008]
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++ EI R G+ ++ RGQ E A  LG T+ +  R ++LPQ  + ++PPL ++ +NLLK+
Sbjct: 100 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKD 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SL   +   D++ +  +I+ Q    I   L+    YL  + ++    N L  + A+ E 
Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED 218


>gi|227893086|ref|ZP_04010891.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus ultunensis DSM 16047]
 gi|227865064|gb|EEJ72485.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus ultunensis DSM 16047]
          Length = 217

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLIRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  +  A +AEIVRSG+ +V  GQME A + G++
Sbjct: 83  ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+ ++IP L SQ+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   ++   N L  K
Sbjct: 190 MYVIIAIMYFIVCFCLSQVANYLEKK 215


>gi|224418072|ref|ZP_03656078.1| amino acid ABC transporter ATP-binding protein [Helicobacter
           canadensis MIT 98-5491]
 gi|253827401|ref|ZP_04870286.1| ABC-type amino acid transport system, permease component
           [Helicobacter canadensis MIT 98-5491]
 gi|253510807|gb|EES89466.1| ABC-type amino acid transport system, permease component
           [Helicobacter canadensis MIT 98-5491]
          Length = 238

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 114/214 (53%), Gaps = 17/214 (7%)

Query: 177 SFPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           +FPTL   +  +  I +  F+LG +L L  + L R +       L  LYIS F   G+P 
Sbjct: 12  AFPTLLKGVPISLAIAIVGFILGAILGLILS-LIRIYRVPILFQLATLYISFFR--GIPV 68

Query: 235 LVLIALKYQLHFDKP-VLGQFNFIGGSTVSPE------FMSLYIALSCYTAAFIAEIVRS 287
           LV I L Y   +  P VL  FN   G  +         FM L  AL C  +A+++EI RS
Sbjct: 69  LVQIFLAY---YGIPLVLRYFNHQYGLNIDISGIDAIYFMYLVYALYC--SAYLSEIFRS 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++++ +GQ+EAA ++G+   +A  +++LPQ+M   +P + + ++ L+K +SL  A    
Sbjct: 124 SILSIDKGQLEAAYSVGMNTTQALFIIILPQSMLLALPNILNFFIILIKETSLVFAASVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++ +     +++ + +E+ +I   IY  +SI +
Sbjct: 184 EIMGIATLEADRSSKFLEVYIIAALIYWVISIFL 217


>gi|206579211|ref|YP_002240194.1| putative amino acid ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|290510006|ref|ZP_06549376.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|206568269|gb|ACI10045.1| putative amino acid ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|289776722|gb|EFD84720.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 229

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL++   +I G+P + +I   + L +  P+L   +  G  TV+       +AL+ +TAA 
Sbjct: 63  LLFLWAEIIRGIPLIFVI---FWLWYLLPMLTGGDLPGAVTVT-------LALAWFTAAS 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +   V +GL ++P+GQ EAA+  G    +  RLVLLPQA+R++ P L   ++ LLK++SL
Sbjct: 113 VMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSL 172

Query: 341 AVAVGFADLVSVGGTIINQ 359
           A  V   +L +V G + N+
Sbjct: 173 AFIVNVPELTTVAGQVNNR 191


>gi|170738364|ref|YP_001779624.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820552|gb|ACA95134.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 18/216 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++  A  FV S VLG++L+L     +R      G  +        +I GLP +V +  
Sbjct: 19  VTIEITACAFVLSSVLGLILALMKVSHNRAV-ATAGSTI------VNVIRGLPIIVQL-- 69

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P LG    +  S +    + L IA S Y A    E  R+G+ A+ RGQ+EAA
Sbjct: 70  -FYMYFVLPDLG----VQLSALQAGVLGLGIAYSAYQA----ENFRAGIEAIDRGQIEAA 120

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+G+      R V+LPQA R  +PP  +  + LLK+SS+A  +  A++   G  I + T
Sbjct: 121 HAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVASTITVAEITRAGQLIASST 180

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            Q + +  +   +YL+L + +   +NRL  ++AL+ 
Sbjct: 181 FQNMSVYTLVALLYLALGLSLMFAVNRLGKRLALRR 216


>gi|154245546|ref|YP_001416504.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154159631|gb|ABS66847.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 214

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 70/129 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  +A++ Y+ A++ EI +  ++AVPR Q EA   L LT  +    V+LPQA+R  
Sbjct: 83  PALVAAGVAMTLYSGAYLGEIWKGCILAVPRTQWEAGECLALTKTQRFVFVILPQALRIA 142

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP     + ++KN+S +V + F DL      I N T +   +  I   IY ++   ++L
Sbjct: 143 VPPTVGFLVQIVKNTSYSVVINFFDLTYSAKVINNATYKPFTVFTIAALIYFAICFPMSL 202

Query: 384 FMNRLNAKI 392
             +R + ++
Sbjct: 203 LASRFDRRL 211


>gi|295836792|ref|ZP_06823725.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB74]
 gi|197697534|gb|EDY44467.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB74]
          Length = 246

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 73/130 (56%), Gaps = 2/130 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A      A+ +E+VR  L AVPR Q EAA+AL L+  +  R V+LPQA   +IP LTS 
Sbjct: 94  VAFGLNYGAYGSEVVRGALNAVPRAQFEAAVALNLSPFQRMRRVILPQAWVQMIPSLTSL 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL-- 388
            + LLK + L   +  ADL  V   + ++TG  +   L  + +Y  L+ ++ L MN L  
Sbjct: 154 LIMLLKATPLLWLISAADLTQVVQAMRDRTGATVPAYLTLLVMYFVLAYLLTLAMNALER 213

Query: 389 NAKIALKEKK 398
           +AK  L +++
Sbjct: 214 SAKTRLGQRE 223


>gi|161613487|ref|YP_001587452.1| hypothetical protein SPAB_01204 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168234122|ref|ZP_02659180.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168244799|ref|ZP_02669731.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168259764|ref|ZP_02681737.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|194450867|ref|YP_002046003.1| L-cystine transport system permease TcyB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194469992|ref|ZP_03075976.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197265602|ref|ZP_03165676.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205352353|ref|YP_002226154.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856534|ref|YP_002243185.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|161362851|gb|ABX66619.1| hypothetical protein SPAB_01204 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194409171|gb|ACF69390.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194456356|gb|EDX45195.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197243857|gb|EDY26477.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205272134|emb|CAR36987.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205331848|gb|EDZ18612.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205336344|gb|EDZ23108.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205351153|gb|EDZ37784.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708337|emb|CAR32640.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|326627403|gb|EGE33746.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 222

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLWLVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S   LV W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWLVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|152968869|ref|YP_001333978.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238893278|ref|YP_002918012.1| glutamate/aspartate transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|330006744|ref|ZP_08305698.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150953718|gb|ABR75748.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238545594|dbj|BAH61945.1| glutamate/aspartate transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328535745|gb|EGF62185.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 229

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL++   +I G+P + +I   + L +  P+L   +  G  TV+       +AL+ +TAA 
Sbjct: 63  LLFLWAEIIRGIPLIFVI---FWLWYLLPMLTGGDLPGAVTVT-------LALAWFTAAS 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +   V +GL ++P+GQ EAA+  G    +  RLVLLPQA+R++ P L   ++ LLK++SL
Sbjct: 113 VMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSL 172

Query: 341 AVAVGFADLVSVGGTIINQ 359
           A  V   +L +V G + N+
Sbjct: 173 AFIVNVPELTTVAGQVNNR 191


>gi|251788053|ref|YP_003002774.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247536674|gb|ACT05295.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 311

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   +A+ AEI+R G++ V  GQ EAA ALGL   + T  ++LPQA+RSI+P   ++
Sbjct: 164 LGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQALRSILPTGFNE 223

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNR 387
            ++L K +S+   +   +L      I N+T Q I +++   +W  +  S+  ++  F+ R
Sbjct: 224 IISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATVWYLVITSVLSVLQYFVER 283

Query: 388 LNAKIALKE 396
             A+ A++E
Sbjct: 284 YVARGAVRE 292


>gi|325686600|gb|EGD28626.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
 gi|327462743|gb|EGF09065.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 230

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P LT+  LNL+++
Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPAQTFLRIVLPQAFRIALPNLTTALLNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E       IY  ++++++L    L   + +K
Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228

Query: 396 EK 397
           E+
Sbjct: 229 ER 230


>gi|255019253|ref|ZP_05291379.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL F2-515]
          Length = 173

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 75/122 (61%), Gaps = 1/122 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 44  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 103

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 104 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 162

Query: 388 LN 389
           L 
Sbjct: 163 LE 164


>gi|87122516|ref|ZP_01078395.1| ABC basic amino acid transporter, inner membrane subunit
           [Marinomonas sp. MED121]
 gi|86162158|gb|EAQ63444.1| ABC basic amino acid transporter, inner membrane subunit
           [Marinomonas sp. MED121]
          Length = 223

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 14/202 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++   S VLG + +L    L+R         LP  YI  F   G P LV I L Y     
Sbjct: 9   QLIFLSVVLGGIFAL-PIALARISKNPLISGLPFAYI--FFFRGTPLLVQIFLVYYGA-- 63

Query: 248 KPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                QF  +  S + P     F    IA +  T+A+ AEI R  + A+P G++EA   +
Sbjct: 64  ----SQFEVVRESFLWPILREPFWCAIIAFTLNTSAYTAEIFRGAIQAIPVGEVEACKVV 119

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R +LLP+A   ++P   ++ + +LK S+LA  +   DL  +  TII +T   
Sbjct: 120 GMTKVQMYRRILLPRAFGIVLPAYGNEIILMLKGSALASTITILDLTGMARTIIARTYTP 179

Query: 364 IEIILIWMFIYLSLS-IMIALF 384
           IEI L    IYL +S ++IA+F
Sbjct: 180 IEIFLAAGAIYLVISMVVIAIF 201


>gi|47564802|ref|ZP_00235846.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
 gi|47558175|gb|EAL16499.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
          Length = 226

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 27  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 81  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 133 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 169



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 41  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 81


>gi|116617559|ref|YP_817930.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096406|gb|ABJ61557.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 481

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 23/150 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  GLP ++                        T  P F +  I L   
Sbjct: 328 RGLPLMVLAFFIYIGLPGVI-----------------------GTKIPAFTAGLITLILN 364

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    VR G  AV +GQMEAA +LG T+ ++ R V++PQ ++ ++P   +Q++  LK
Sbjct: 365 EGAYTGAFVRGGFEAVDKGQMEAARSLGFTYNRSMRKVIMPQGLKIMVPSFINQFIITLK 424

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++S+  A+G  +L   G  I+ +  Q   +
Sbjct: 425 DTSILSAIGILELTQTGTLIVARNSQGFRV 454


>gi|300781314|ref|ZP_07091168.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium genitalium ATCC 33030]
 gi|300533021|gb|EFK54082.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium genitalium ATCC 33030]
          Length = 305

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 56/85 (65%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  F    + L    A ++AEIVRSG+ +VP GQ+EA+ ALG+      R  +LPQAMR 
Sbjct: 142 SSAFALAVLGLGLNEAGYMAEIVRSGINSVPEGQIEASKALGMGWGMTMRRTVLPQAMRI 201

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFA 347
           IIPP  +++++LLK SSL VA+ ++
Sbjct: 202 IIPPTGNEFISLLKTSSLVVAIPYS 226


>gi|238024355|ref|YP_002908587.1| polar amino acid family ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237879020|gb|ACR31352.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 218

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 20/200 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+       V S +LG+V +L   ++SRH   +   A  +      ++ GLP +VL+  
Sbjct: 19  LTVFITISCLVLSTMLGLVWALL--KMSRHAPVRRAAATLI-----NVVRGLPMIVLL-- 69

Query: 241 KYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            + ++F  P +G Q + +  S V          L+   + ++AEI+RSG+ +V  GQ EA
Sbjct: 70  -FYIYFVLPSIGLQMSALQASIV---------GLAFGYSTYVAEIIRSGIESVDPGQYEA 119

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G+   K    V+LPQA++  +PP ++  +++LK+SSLA  +  +++   G  I   
Sbjct: 120 AQSIGMGRVKTMTRVILPQAIKVALPPYSNTLVSMLKDSSLASTITVSEMTRQGSLIAAA 179

Query: 360 TGQAIEIILIWMFIYLSLSI 379
           T Q +E+  +    YL++S+
Sbjct: 180 TFQNLEVYTLVAIGYLAMSL 199


>gi|209552183|ref|YP_002284099.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539776|gb|ACI59707.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 216

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 90/168 (53%), Gaps = 11/168 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV++   Y ++F  P   QF  +  +  S       +AL      F+A++ ++G++
Sbjct: 60  GIPALVML---YIVYFGLP---QFEVVMDAIPSAS-----VALGISMGGFLADVFKAGIL 108

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA ALGL+   A   V+LPQ +R + PP+    ++  + ++LA  +   +L+
Sbjct: 109 AIPLGQREAAAALGLSRSTAFTRVILPQTIRIVTPPVLGYVISYFQATALAYTIAVPELM 168

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           S   T+     + +E++ +  F+Y  + I  A ++NRL+ +   + K 
Sbjct: 169 SRSYTVAADNFRFLEVLTMAGFLYAVICIPSARWVNRLSNRDEFESKH 216


>gi|325685428|gb|EGD27529.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 213

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 21/182 (11%)

Query: 228 LIFGLPTLVLIA---------LKYQLHF------DKPVLGQ--FNFIGGSTVS---PEFM 267
           LIF LP  +L++         LK+ L+F        P+L Q  F F G   V    P +M
Sbjct: 26  LIFSLPLGILVSFGLSSRFAPLKWLLNFYVWLMRGTPLLLQLIFVFYGLPIVGLTFPRYM 85

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +A      A+ AEI R G  A+ RGQ EAA  L LT+ +  R +++PQ ++ ++P +
Sbjct: 86  AALVAFVLNYTAYFAEIFRGGNQAIDRGQFEAAKVLQLTYGQTLRKIVIPQVIKIVLPSI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G     +    + ++L+ + IYL L  +  L + +
Sbjct: 146 GNEVINLVKDSSLVYVIGLGDLLRAGNLATARDVTLVPLVLVAL-IYLFLIGLCTLLLRQ 204

Query: 388 LN 389
           L 
Sbjct: 205 LE 206


>gi|325479869|gb|EGC82954.1| ABC transporter, permease protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 491

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 4/122 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ +  ++A++AE+ R G+ +V +G+ EAA +LGL++ +  R V++PQA+++ +P L ++
Sbjct: 367 ISFALNSSAYMAELFRGGINSVSKGEKEAARSLGLSNLQTMRKVVMPQAIKNSLPALGNE 426

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K +S+A  +G ADL      +I+QT  A         IYL    +I +FM +L  
Sbjct: 427 IITLFKETSIAGFIGLADLTRGASIVISQTFDAATAYFSAAIIYL----VIVMFMEKLFK 482

Query: 391 KI 392
           K+
Sbjct: 483 KL 484


>gi|288936938|ref|YP_003440997.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|288891647|gb|ADC59965.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 229

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL++   +I G+P + +I   + L +  P+L   +  G  TV+       +AL+ +TAA 
Sbjct: 63  LLFLWAEIIRGIPLIFVI---FWLWYLLPMLTGGDLPGAVTVT-------LALAWFTAAS 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +   V +GL ++P+GQ EAA+  G    +  RLVLLPQA+R++ P L   ++ LLK++SL
Sbjct: 113 VMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSL 172

Query: 341 AVAVGFADLVSVGGTIINQ 359
           A  V   +L +V G + N+
Sbjct: 173 AFIVNVPELTTVAGQVNNR 191


>gi|262042354|ref|ZP_06015516.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259040262|gb|EEW41371.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 202

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL++   +I G+P   LI + + L +  P+L   +  G  TV+       +AL+ +TAA 
Sbjct: 36  LLFLWAEIIRGIP---LIFVIFWLWYLLPMLTGGDLPGAVTVT-------LALAWFTAAS 85

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +   V +GL ++P+GQ EAA+  G    +  RLVLLPQA+R++ P L   ++ LLK++SL
Sbjct: 86  VMHSVLAGLQSLPKGQYEAALTQGFAPGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSL 145

Query: 341 AVAVGFADLVSVGGTIINQ 359
           A  V   +L +V G + N+
Sbjct: 146 AFIVNVPELTTVAGQVNNR 164


>gi|123444013|ref|YP_001007983.1| ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090974|emb|CAL13857.1| Putative ABC transporter permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 369

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 56/81 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + +A++AE+VR GL A+P+GQ EAA +LGL + K   LV+LPQA++ +IP L + 
Sbjct: 238 VGVVLFQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNT 297

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + L K++SL + +G  DL S
Sbjct: 298 IIALFKDTSLVIIIGLFDLFS 318


>gi|33863166|ref|NP_894726.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9313]
 gi|33635083|emb|CAE21069.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9313]
          Length = 327

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 72/117 (61%), Gaps = 3/117 (2%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE VR GL A+PR Q EAA  LGL+ ++  +LV+LPQA+R+ +P LT+Q + LL+N+S
Sbjct: 202 YIAEDVRGGLQAIPRTQREAAAVLGLSPKQIIQLVVLPQALRTALPALTNQAVGLLQNTS 261

Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   +G  +L+ +  +++      G+ +E+ +    +Y  +   +AL    L  +++
Sbjct: 262 LMAILGLVELLGISRSLLANPDFIGRYLEVYVWLAGVYWLVCTAMALLARHLEHQLS 318


>gi|329922570|ref|ZP_08278145.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus sp. HGF5]
 gi|328942114|gb|EGG38396.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus sp. HGF5]
          Length = 217

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 22/226 (9%)

Query: 173 NRGLSF-PTLTMDTNAKIFV--FSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTF 227
           N  + F PTL       I V  FS +L IV+S  A   RLS+ +  +T     ++Y+  F
Sbjct: 3   NSWIDFLPTLLKGAEITIIVAFFSAILAIVMSFAAGLCRLSKLWIVRTAT---VVYVEVF 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
                 T +L+ L + L+F  P      FIG     P+ ++  +A+     A+ +EIVRS
Sbjct: 60  R----GTSLLVQL-FWLYFALP------FIGIEL--PKMLAAILAIGLNFGAYGSEIVRS 106

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++AVP+GQ EAA+AL +   +    V+LPQA   ++PP  +Q + L+K++SL   +  A
Sbjct: 107 AVLAVPKGQWEAAVALNMRPWQRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMA 166

Query: 348 DLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           DL      + N       EI+++ + +Y  ++ ++++ +  L  K+
Sbjct: 167 DLTYQAMVLRNNYISWTTEILVLLLLMYFVIATLVSMAVRLLERKL 212


>gi|314934022|ref|ZP_07841387.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus caprae C87]
 gi|313654172|gb|EFS17929.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus caprae C87]
          Length = 485

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 60/80 (75%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL + +  + V++PQA+++I+P L ++
Sbjct: 360 IALIINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYIQTMKSVIMPQAIKNILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 420 FVTLIKESSIVSTIGVGEIM 439



 Score = 40.0 bits (92), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y +  + G  NT  ++  G+I  +I+G  +   +++  K ++W+  +Y+E  R  P L
Sbjct: 275 TKYGSFFIKGIKNTILISLVGVILGSILGAFIALLKINKFKPLSWLASIYIEFLRGTPML 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|312976992|ref|ZP_07788741.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Lactobacillus crispatus
           CTV-05]
 gi|310896320|gb|EFQ45385.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Lactobacillus crispatus
           CTV-05]
          Length = 537

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 72/116 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AE++R G+I+ P GQ EAA ALG+TH +    ++L QA+R+ +P +T++
Sbjct: 391 IIVSINTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILLQAIRNCLPSITNE 450

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++  +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N
Sbjct: 451 FIVNIKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFN 506



 Score = 37.0 bits (84), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG----------A 116
           +AG E  +     T+   Y   I+ G   T  LA  G I    IG LVG           
Sbjct: 280 KAGNETKKENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTR 339

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G+     +V W+  VYVE+FR  P +V    +Y
Sbjct: 340 GKRWTLNVVKWLLSVYVEIFRGTPMMVQAAVIY 372


>gi|307319174|ref|ZP_07598604.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306895281|gb|EFN26037.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 218

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P +++  IAL+ + +AF+ EI R  + AVP+GQ EAA ALGL + ++ R V+LPQ
Sbjct: 80  GFAINP-WIAATIALALHASAFLGEIWRGCIEAVPKGQREAATALGLRYFRSMRHVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A R  + P     + L+K +SLA  +GF +L   G  I N T
Sbjct: 139 AARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQGQIINNAT 180


>gi|269214286|ref|ZP_06158476.1| L-cystine ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
 gi|269210117|gb|EEZ76572.1| L-cystine ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
          Length = 227

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219

Query: 391 K 391
           +
Sbjct: 220 R 220


>gi|183980096|ref|YP_001848387.1| ABC transporter permease protein GlnQ [Mycobacterium marinum M]
 gi|183173422|gb|ACC38532.1| ABC transporter permease protein GlnQ [Mycobacterium marinum M]
          Length = 589

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 13/169 (7%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +  GLP +V+I +          LG    +GG T +  +     AL     A++ EI+
Sbjct: 403 TDIFRGLPEVVIILIIG--------LGVGPIVGGLTNNNPYPLGIAALGLMAGAYVGEIL 454

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V  GQ+EA+ ALG ++  A RLV++PQ +R ++P L +Q++ LLK S+L   +G
Sbjct: 455 RSGIQSVDPGQLEASRALGFSYSAAMRLVVVPQGVRRVLPALVNQFIALLKASALVYFLG 514

Query: 346 F----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                 +L  VG  +  QTG    ++   +F YL L++ +   +N ++A
Sbjct: 515 LIAQQRELFQVGRDLNAQTGNLSPLVAAGIF-YLMLTVPLTHLVNYIDA 562


>gi|118470254|ref|YP_890525.1| glutamine-binding periplasmic protein/glutamine transporter
           permease [Mycobacterium smegmatis str. MC2 155]
 gi|118171541|gb|ABK72437.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Mycobacterium smegmatis str. MC2 155]
          Length = 475

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 87/151 (57%), Gaps = 14/151 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF +G+V++L    L+R         +  LYIS  +I G P LV + L +        
Sbjct: 282 IISFAIGLVIAL-GVALARLSSNAVLSNVARLYIS--IIRGTPLLVQLFLVFY------A 332

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L +F    G  + P F +  IA S     + AEI+R+ ++++P+GQ EAA  +GLT+ K+
Sbjct: 333 LPEF----GVRIDP-FPAAVIAFSLNVGGYAAEIIRAAILSIPKGQWEAAETIGLTYGKS 387

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            + ++LPQA R  +PPL++  ++L+K++SLA
Sbjct: 388 LQRIILPQAARVAVPPLSNTLISLVKDTSLA 418


>gi|99080137|ref|YP_612291.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99036417|gb|ABF63029.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 442

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 58/82 (70%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M ++I ++ + +A++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++  IP 
Sbjct: 309 MRVFIMVTLFASAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPG 368

Query: 327 LTSQYLNLLKNSSLAVAVGFAD 348
           + S ++ + K+++L   +G  D
Sbjct: 369 IVSTFIGVFKDTTLVSVIGLFD 390


>gi|330890819|gb|EGH23480.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 220

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 73/129 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+P GQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I +  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIEILG 210

Query: 386 NRLNAKIAL 394
            ++  ++AL
Sbjct: 211 RQIEKRVAL 219


>gi|254224690|ref|ZP_04918306.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125622753|gb|EAZ51071.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
          Length = 266

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|56697502|ref|YP_167870.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679239|gb|AAV95905.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 218

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 1/129 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IA   + AA+ +EI+R+G+ +V +GQ+ A  A GL + +  R V+LPQA R+++P
Sbjct: 90  FYSALIAFVMFEAAYYSEIIRAGIQSVRQGQVHAGQATGLNYWQIQRYVVLPQAFRNMVP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q + L +++SL   V   D ++V   +    G+  E+ +    +Y  +    +LF+
Sbjct: 150 ILVTQGIILFQDTSLVFVVSLRDFMTVSSIVARTEGRLAEMYVFAALVYFVICFAGSLFV 209

Query: 386 NRLN-AKIA 393
            RL  AK A
Sbjct: 210 RRLQKAKTA 218


>gi|312142894|ref|YP_003994340.1| polar amino acid ABC transporter, inner membrane subunit
           [Halanaerobium sp. 'sapolanicus']
 gi|311903545|gb|ADQ13986.1| polar amino acid ABC transporter, inner membrane subunit
           [Halanaerobium sp. 'sapolanicus']
          Length = 220

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 71/118 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+ AE +R  + +V  GQ++AA++LG+T       V+LPQA+R +IP  T++++ ++K
Sbjct: 96  SGAYQAEYLRGSIQSVSSGQLKAALSLGMTKWMGIIYVVLPQALRRVIPAWTNEFIYMIK 155

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSLA  +G  +L++ G  I ++  Q   + ++   IYL + I+     N+   K+A+
Sbjct: 156 YSSLAYVIGAKELMTEGKLIASRNYQFFNVYMVVALIYLVVIIIFVYLFNKFEKKVAI 213


>gi|256855202|ref|ZP_05560563.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|300862178|ref|ZP_07108258.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|256709715|gb|EEU24762.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|295112535|emb|CBL31172.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300848703|gb|EFK76460.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
          Length = 527

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 297 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 351

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 352 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 392

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 393 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 452

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 453 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 497


>gi|183598313|ref|ZP_02959806.1| hypothetical protein PROSTU_01703 [Providencia stuartii ATCC 25827]
 gi|188020487|gb|EDU58527.1| hypothetical protein PROSTU_01703 [Providencia stuartii ATCC 25827]
          Length = 246

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 21/195 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDKPVL-----------GQFNFIGGSTV 262
           + LP L +  F+ FG   L+ I    ++  L F +  L           G+F+F      
Sbjct: 55  RGLPELLVVLFVYFGTLQLINILGDGIEINLGFWQTTLQIDPSIFFADSGEFDF------ 108

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +P F    +AL+   A++ ++ +R  L AVP GQ EA +ALGLT R      ++PQ  R 
Sbjct: 109 TP-FACGVVALALLYASYASQTLRGALKAVPYGQWEAGLALGLTKRTIFFRFIMPQMWRH 167

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L +Q+L LLK+++L   +   DL+    TI+N+T +      I   IYL+++++  
Sbjct: 168 ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLLSQ 227

Query: 383 LFMNRLNAKIALKEK 397
           + + R+  +    E+
Sbjct: 228 VILKRIELRTTRFER 242


>gi|222480217|ref|YP_002566454.1| polar amino acid ABC transporter, inner membrane subunit
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222453119|gb|ACM57384.1| polar amino acid ABC transporter, inner membrane subunit
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 267

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 86/147 (58%), Gaps = 2/147 (1%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q N +G +++S    +  + L   +AA+ ++I R+ L +V  GQ+EA  ++GL+  +A R
Sbjct: 120 QIN-LGVASISSAMTAGILGLGLRSAAYQSQIFRATLSSVDDGQLEAGRSIGLSRFEAVR 178

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWM 371
            V++PQA+R  IP   +++  +LK++S+  A+G A+L++ G  + + QT   +E+IL   
Sbjct: 179 YVVVPQALRRSIPGFQNEFTIVLKDTSIVFAIGLAELLTRGYDLFSEQTTAVLEVILFIS 238

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  L+      ++RL    A+ E +
Sbjct: 239 AIYFVLTFTTNRALDRLGDYYAIPEGE 265


>gi|259416339|ref|ZP_05740259.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Silicibacter sp. TrichCH4B]
 gi|259347778|gb|EEW59555.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Silicibacter sp. TrichCH4B]
          Length = 442

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 58/82 (70%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M ++I ++ + +A++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++  IP 
Sbjct: 309 MRVFIMVTLFASAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPG 368

Query: 327 LTSQYLNLLKNSSLAVAVGFAD 348
           + S ++ + K+++L   +G  D
Sbjct: 369 IVSTFIGVFKDTTLVSVIGLFD 390


>gi|257421538|ref|ZP_05598528.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|294779326|ref|ZP_06744729.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|257163362|gb|EEU93322.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|294453612|gb|EFG22011.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|323479461|gb|ADX78900.1| amino acid permease ABC transporter protein [Enterococcus faecalis
           62]
          Length = 527

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 297 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 351

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 352 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 392

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 393 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 452

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 453 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 497


>gi|222081207|ref|YP_002540570.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725886|gb|ACM28975.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 252

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 111/208 (53%), Gaps = 30/208 (14%)

Query: 158 IPDHSIVLPFGMFLNNR--GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
           I D+ ++L  G + N    GL+  TL +   A  F F F   I+L+L   RLS+      
Sbjct: 9   IHDYWLLLLVGQYPNGPIGGLA-ATLILSILAIAFAFPF--SILLAL--ARLSKS----- 58

Query: 216 GKALPLL-YISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
               PLL +  T L++   G+P L+LI   Y   F  P++       G+ V P F+++ +
Sbjct: 59  ----PLLNWPVTALVYFTRGVPLLMLILWGY---FLVPLMT------GADV-PSFVTMLV 104

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  Y   F++E+VR G++A+  GQ+EAA ALG ++  A R V+LPQA+ ++IP + S  
Sbjct: 105 TLVVYQGVFLSEVVRGGILALGHGQLEAARALGHSYFGAMRYVVLPQALYNVIPSILSVL 164

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           ++ +K+++L   +   DL      I NQ
Sbjct: 165 VSTIKDTTLGYVINVPDLTFAANQINNQ 192


>gi|166032742|ref|ZP_02235571.1| hypothetical protein DORFOR_02457 [Dorea formicigenerans ATCC
           27755]
 gi|166027099|gb|EDR45856.1| hypothetical protein DORFOR_02457 [Dorea formicigenerans ATCC
           27755]
          Length = 236

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 114/216 (52%), Gaps = 13/216 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + S V G+++  F   L+R+F  +  K +  +YIS   I G PT+V + L Y   +  
Sbjct: 27  ITIASCVAGLIVGFFIA-LARYFEVRVLKTVAKVYIS--FIRGTPTMVQLVLVY---YGI 80

Query: 249 PVLGQ-FNFIGGST-----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           P+L +  N   G++     + P   ++ I L    AA+++EI+RS L++V  GQ+EA  +
Sbjct: 81  PILLRVMNEAWGTSFDINGIHPVVFAI-ITLGLNAAAYMSEIIRSALMSVDEGQVEACYS 139

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L +T  +A   V++PQA    +P L + +++LLK +SL   +   D+++    +  ++ +
Sbjct: 140 LNMTKWQALISVVIPQAFVVALPSLGNNFISLLKETSLVFNIAVVDIMAQARIVGARSYR 199

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             E+ +    IY    +++   + ++   +  KE++
Sbjct: 200 YFEVYIAVSLIYWVCCMLLERLLAKIETYVRRKERR 235


>gi|254229167|ref|ZP_04922586.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262395517|ref|YP_003287370.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
 gi|151938252|gb|EDN57091.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262339111|gb|ACY52905.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 306

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 68/115 (59%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A++AE+VR+GL ++ +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K
Sbjct: 186 SSAYVAEVVRAGLQSIDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVK 245

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++S+   +   ++  VG  + N +G   EI LI    Y  +   ++L    + AK
Sbjct: 246 DTSIVSLISIQEMTFVGTEMANSSGYIFEIWLIVGIAYFLICFGLSLIFRHIEAK 300


>gi|329944505|ref|ZP_08292670.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328530270|gb|EGF57149.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 291

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 1/99 (1%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           TVS +F  L + +   T+A  AE+ RSG+ A+ RGQ EAA+ALG++     RL+L PQA+
Sbjct: 154 TVS-DFWKLALPIVMCTSATTAEVFRSGVRALDRGQTEAAVALGMSGSLTMRLILAPQAL 212

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           R ++P L +Q + ++K ++LA  + + +L+  G T+I Q
Sbjct: 213 RLMLPTLITQMVTIIKGTTLAYVLAYPELMYRGSTVIGQ 251


>gi|302189421|ref|ZP_07266094.1| putative ABC transport system, ATP-binding protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 506

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 22/213 (10%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST----FLIFGLPTLVLIALKYQLH 245
           +V S VLG +L+L               +LPL+ +      +L   LP LVL+   Y L 
Sbjct: 32  WVISIVLGFILAL-----------AKQSSLPLINLPAKAYIWLFRSLPLLVLLIFVYNLP 80

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P          + ++  F +  IA+     A++AEI R GL+++ +GQ EAA ALGL
Sbjct: 81  QAVPA-------TSAVLANPFWAGLIAMVMCETAYVAEIHRGGLLSIAKGQTEAARALGL 133

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
                   +++PQA+R  +P LT++Y++++K SSL   +   +++ VG  + +Q    +E
Sbjct: 134 RFVGTQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLTEILMVGQRLYSQNFLVME 193

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +    F Y+ +  +    + RL   + + + K
Sbjct: 194 TMAAVAFYYVLIVTVFDFLLKRLERYLDVTQHK 226


>gi|152999485|ref|YP_001365166.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           baltica OS185]
 gi|160874105|ref|YP_001553421.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           baltica OS195]
 gi|151364103|gb|ABS07103.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS185]
 gi|160859627|gb|ABX48161.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS195]
 gi|315266337|gb|ADT93190.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS678]
          Length = 226

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 76/123 (61%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     + ++LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++F+  S + +++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|39997744|ref|NP_953695.1| amino acid ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39984636|gb|AAR36022.1| amino acid ABC transporter, permease protein, putative [Geobacter
           sulfurreducens PCA]
 gi|298506680|gb|ADI85403.1| amino acid ABC transporter, membrane protein, putative [Geobacter
           sulfurreducens KN400]
          Length = 262

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 90/181 (49%), Gaps = 14/181 (7%)

Query: 214 KTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +  + LPL Y+       I G P LV I + + +  D   +G    +G            
Sbjct: 88  QRSRLLPLRYLGRIYVETIRGTPLLVQILVFFYVVADAFGVGDRYLVG-----------V 136

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS +  A+I+E++R+G+ +V   QME+A A+GLT  +  R V+ PQA R  +PPL  Q
Sbjct: 137 ITLSLFAGAYISEMIRAGIESVGDSQMESARAIGLTRAQIYRYVVFPQAFRQTLPPLAGQ 196

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +++K+SSL   +  ++       +   T   +E  L     YL++++ I+L   RL  
Sbjct: 197 FASIVKDSSLLSIIAVSEFTLNAQEVNAFTYSTLESYLPLAIGYLAITLPISLLSRRLEK 256

Query: 391 K 391
           K
Sbjct: 257 K 257


>gi|163938764|ref|YP_001643648.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|163860961|gb|ABY42020.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
          Length = 232

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +FV+GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 33  TTIPLTLITFVIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 87  FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 47  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87


>gi|328470611|gb|EGF41522.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 306

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L L  L    + +   L  F F G S +     S  + +   ++A+IAE+VR+GL +
Sbjct: 142 IPLLGLEDLLRNYNGEPNALQSFLF-GPSNLWENLASGVLCVGLLSSAYIAEVVRAGLQS 200

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+   +   ++  
Sbjct: 201 IDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTF 260

Query: 352 VGGTIINQTGQAIEIILIWMFIY 374
           VG  + N +G   EI LI  F Y
Sbjct: 261 VGTEMANSSGYIFEIWLIVGFSY 283


>gi|294793049|ref|ZP_06758195.1| amino acid ABC transporter, permease protein [Veillonella sp.
           6_1_27]
 gi|294794912|ref|ZP_06760047.1| amino acid ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|294454274|gb|EFG22648.1| amino acid ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|294455994|gb|EFG24358.1| amino acid ABC transporter, permease protein [Veillonella sp.
           6_1_27]
          Length = 238

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++ EI R G+ ++ RGQ E A  LG T+ +  R ++LPQ  + ++PPL ++ +NLLK+
Sbjct: 120 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKD 179

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SL   +   D++ +  +I+ Q    I   L+    YL  + ++    N L  + A+ E 
Sbjct: 180 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED 238


>gi|123444359|ref|YP_001008324.1| putative amino acid transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122091320|emb|CAL14206.1| putative amino acid transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 251

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 75/127 (59%), Gaps = 1/127 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G++A+  GQ +A ++LG    +    V+LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVILPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLD 213

Query: 383 LFMNRLN 389
           L  N LN
Sbjct: 214 LLANALN 220


>gi|330448490|ref|ZP_08312138.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492681|dbj|GAA06635.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 310

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 68/117 (58%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q+   G + +     S  + +    AA+IAE++RSG+ A+ +GQ EAA +LGL+     R
Sbjct: 166 QYFLFGDAQLWENLFSGILCIGLIAAAYIAEVIRSGIDAIAKGQWEAADSLGLSKWDRFR 225

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            V+ PQA+  I+P L  Q+++++K+SS+   +   ++  VG  I N +G   EI L+
Sbjct: 226 YVIFPQAIAGIVPALAGQFISIVKDSSIISLISIQEMTFVGSEIANSSGLIFEIWLL 282


>gi|309379288|emb|CBX22061.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 219

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  
Sbjct: 92  ALVFLGASYMAEAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANI 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+  AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +
Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211

Query: 392 I 392
           I
Sbjct: 212 I 212


>gi|308388974|gb|ADO31294.1| amino acid permease integral membrane protein [Neisseria
           meningitidis alpha710]
          Length = 227

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219

Query: 391 K 391
           +
Sbjct: 220 R 220


>gi|297517480|ref|ZP_06935866.1| glutamine ABC transporter permease protein [Escherichia coli OP50]
          Length = 195

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 12/178 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V     G+V+ L A   +R F       + L++I   +I G P +V +   Y   F  
Sbjct: 25  ISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FAL 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+   FN +    + P F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  
Sbjct: 79  PM--AFNDL---RIDP-FTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRW 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI
Sbjct: 133 ETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEI 190


>gi|261409440|ref|YP_003245681.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Paenibacillus
           sp. Y412MC10]
 gi|329922585|ref|ZP_08278160.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus sp. HGF5]
 gi|261285903|gb|ACX67874.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus sp. Y412MC10]
 gi|328942129|gb|EGG38411.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus sp. HGF5]
          Length = 220

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 17/209 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FV + ++G++L+ FA R          K  PL  I+  +I  +    L+   + L++  P
Sbjct: 29  FVVALIIGLLLA-FAAR---------SKFKPLSLITKGIIEFIRNTPLLVQVFFLYYSLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L   +        P F +  I L  + + +++E+ RSG+  VP+GQ EAA AL  T  +
Sbjct: 79  LLTGISI-------PAFYAGVIGLGLHYSTYLSEVYRSGIEGVPKGQWEAATALNYTKSQ 131

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQA+  IIP L +  + + K + +  A+   +++     I++Q+ +A E   +
Sbjct: 132 TWRSIILPQAVPPIIPVLGNYLIVMFKETPILCAITLVEMMLTAKNIVSQSFRAFEPYTL 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++L +S + +L + RL  ++ L+  K
Sbjct: 192 VGILFLIISYIASLLVQRLEKRLNLQRGK 220


>gi|217972161|ref|YP_002356912.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           baltica OS223]
 gi|304411005|ref|ZP_07392621.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS183]
 gi|307301872|ref|ZP_07581630.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica BA175]
 gi|217497296|gb|ACK45489.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS223]
 gi|304350540|gb|EFM14942.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS183]
 gi|306913910|gb|EFN44331.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica BA175]
          Length = 226

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 76/123 (61%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     + ++LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++F+  S + +++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|86138394|ref|ZP_01056968.1| amino acid ABC transporter [Roseobacter sp. MED193]
 gi|85824919|gb|EAQ45120.1| amino acid ABC transporter [Roseobacter sp. MED193]
          Length = 218

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 11/169 (6%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I +FL  G P L+ + L Y           F  +      P F++  I L  + A + +E
Sbjct: 57  IFSFLFLGTPLLLQLFLIY-----------FGLVQIGIDVPAFVAGVIGLGLHFAVYNSE 105

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + ++ ++AV +GQ+EAA  LGL+  +A R V++PQA+R +IPP+ +  + LLK+S+L   
Sbjct: 106 LFQTSILAVDKGQIEAARTLGLSRMQALRKVVVPQAVRDVIPPIGNNMIALLKDSALVSV 165

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G ++L       I  T +  E  ++   IY  +++ +   + R+  +I
Sbjct: 166 IGVSELTLSAQRAIGSTYRPFEFYVLVAAIYYIINLGMEAVLRRVERRI 214


>gi|253686633|ref|YP_003015823.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753211|gb|ACT11287.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 362

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+T+     +L + +  + +A++AE+VR GL A+P+GQ EAA +LGL + +   LV+LPQ
Sbjct: 220 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 278

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A++ +IP L +  ++L K++SL + +G  DL S
Sbjct: 279 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 311


>gi|229514446|ref|ZP_04403907.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229526418|ref|ZP_04415822.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229336576|gb|EEO01594.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229348426|gb|EEO13384.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
          Length = 266

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIGL----------DRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|15676686|ref|NP_273830.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis MC58]
 gi|7226020|gb|AAF41201.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis MC58]
          Length = 220

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 93  IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 153 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|84394507|ref|ZP_00993217.1| amino acid ABC transproter, permease protein [Vibrio splendidus
           12B01]
 gi|84374860|gb|EAP91797.1| amino acid ABC transproter, permease protein [Vibrio splendidus
           12B01]
          Length = 223

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 93/170 (54%), Gaps = 13/170 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241
           + T  ++ ++     ++LSL    + R F       L  LYIS F   G P LV L  L 
Sbjct: 19  LGTTMEMAIWGLFFALILSLILANI-RVFKIPVLDQLSQLYISFFR--GTPLLVQLFLLY 75

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L    P +   +  G +          I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 76  YGLPQVFPWMVGLDAFGAAV---------IGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|120597747|ref|YP_962321.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           sp. W3-18-1]
 gi|120557840|gb|ABM23767.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sp. W3-18-1]
 gi|319427459|gb|ADV55533.1| ABC arginine transporter, inner membrane subunit, ArtQ [Shewanella
           putrefaciens 200]
          Length = 226

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 76/123 (61%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     + ++LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAMTMKSIILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++F+  S + +++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|313667601|ref|YP_004047885.1| ABC transporter [Neisseria lactamica ST-640]
 gi|313005063|emb|CBN86495.1| putative ABC transporter [Neisseria lactamica 020-06]
          Length = 219

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  
Sbjct: 92  ALVFLGASYMAEAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANI 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+  AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +
Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211

Query: 392 I 392
           I
Sbjct: 212 I 212


>gi|254670614|emb|CBA06589.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha153]
          Length = 227

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219

Query: 391 K 391
           +
Sbjct: 220 R 220


>gi|254284659|ref|ZP_04959626.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|150425444|gb|EDN17220.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
          Length = 266

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 90  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 233


>gi|153802492|ref|ZP_01957078.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|124121962|gb|EAY40705.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
          Length = 220

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 13/170 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241
           + T  ++  +  V  ++L+LF   + R F       L  LYIS F   G P LV L  L 
Sbjct: 19  LGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLLY 75

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L    P+L   +          F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 76  YGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|239833820|ref|ZP_04682148.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821883|gb|EEQ93452.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 239

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 92/155 (59%), Gaps = 2/155 (1%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+  G P LV I + Y      P + +++F+      P + ++ IAL+   AA+ +EI+R
Sbjct: 58  FVFRGTPLLVQIFIIYYGLSQFPAI-RYSFLWPILREPYWCAI-IALTLNNAAYASEIIR 115

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL++VP GQ+EAA A G++     R +++P A+R  +P   ++ ++++K +SLA  +  
Sbjct: 116 GGLLSVPHGQIEAAKACGMSSFTCFRRIVMPLAIRQALPGYGNEMISMIKATSLASIITL 175

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++  +   +I ++ +AIEI +I   IYL+++ ++
Sbjct: 176 MEVTGIAAKLIAESYRAIEIFVIAGAIYLAINFVL 210



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA S ++    +  L    RLS   ++ WI R+YV VFR  P LV IF +Y   LS 
Sbjct: 20  TLKLAASSIVFGAFLALLFALMRLSGLTVLDWIARLYVFVFRGTPLLVQIFIIYYG-LSQ 78

Query: 156 LPIPDHSIVLP 166
            P   +S + P
Sbjct: 79  FPAIRYSFLWP 89


>gi|229524911|ref|ZP_04414316.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229338492|gb|EEO03509.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
          Length = 223

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 13/170 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241
           + T  ++  +  V  ++L+LF   + R F       L  LYIS F   G P LV L  L 
Sbjct: 19  LGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLLY 75

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L    P+L   +          F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 76  YGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|288575665|ref|ZP_05977394.2| L-cystine ABC transporter, permease protein [Neisseria mucosa ATCC
           25996]
 gi|288567449|gb|EFC89009.1| L-cystine ABC transporter, permease protein [Neisseria mucosa ATCC
           25996]
          Length = 227

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219

Query: 391 K 391
           +
Sbjct: 220 R 220


>gi|295096063|emb|CBK85153.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 228

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 17/163 (10%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIVL+  A R         G     L+    LI G+P + +I   + + +  P++   + 
Sbjct: 46  GIVLACVAWRYP-------GVVRSALFAWAELIRGIPLIFVI---FWMWYLLPLITGRDL 95

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G +TV+       +AL+ +TAA +   V +GL A+P GQ EAA++ G + ++    VLL
Sbjct: 96  PGATTVT-------LALAWFTAAAVMHSVLAGLRALPSGQNEAALSQGFSTQQTLWRVLL 148

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PQA+R+I+P L   +++LLK++SLA  V   +L +V G I N+
Sbjct: 149 PQALRNILPSLVGIFISLLKDTSLAFIVNVPELTTVAGQINNR 191


>gi|56751274|ref|YP_171975.1| amino acid ABC transporter permease [Synechococcus elongatus PCC
           6301]
 gi|56686233|dbj|BAD79455.1| permease protein of amino acid ABC transporter [Synechococcus
           elongatus PCC 6301]
          Length = 396

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A++AE VR GL A+P+GQ EAA ALGL   +  R ++LPQA+R  IP +   
Sbjct: 268 VGLTIFLSAYLAETVRGGLQAIPQGQFEAAAALGLDLFQTYRFIVLPQALRISIPAIVGL 327

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387
           +LNLL++++L   VG  +L+ +  +I+      G+  E+ L    +Y      +A    R
Sbjct: 328 FLNLLQDTTLLSIVGLLELLGISRSILANPAYLGRYAEVYLFLGVLYWLCCYGLAQLSRR 387

Query: 388 LNAKI 392
           L  ++
Sbjct: 388 LEQRL 392


>gi|312277580|gb|ADQ62237.1| Amino acid (Glutamine) ABC transporter substrate binding
           protein/permease protein [Streptococcus thermophilus
           ND03]
          Length = 516

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG +H +  R ++LPQ +R+I+P   ++++
Sbjct: 385 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFV 444

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   +   IY  L+  +
Sbjct: 445 INIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTV 493


>gi|299770479|ref|YP_003732505.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. DR1]
 gi|298700567|gb|ADI91132.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. DR1]
          Length = 280

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 74/123 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E +R+G+  V RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 150 ALGLYTAARVSEHIRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYSIKFIMAWIEKR 269

Query: 392 IAL 394
           +A+
Sbjct: 270 MAV 272



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           G     W A    + A ++G+L+G  R   NK +A+I   YVE+FRNIP +V +FF
Sbjct: 54  GVFTMVWTAVIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109


>gi|218661166|ref|ZP_03517096.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli IE4771]
          Length = 203

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 101/188 (53%), Gaps = 14/188 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G++L L  T ++R F      A+   Y+  ++I G P LV +   + + +  P 
Sbjct: 28  LLSFFFGLILGLI-TAIARLFGPAPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A
Sbjct: 82  IG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
               +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T + + + +  
Sbjct: 134 MSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEA 193

Query: 371 MFIYLSLS 378
             IYL LS
Sbjct: 194 ALIYLVLS 201


>gi|29374889|ref|NP_814042.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|29342347|gb|AAO80113.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
          Length = 527

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 297 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 351

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 352 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 392

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 393 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 452

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 453 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 497


>gi|172057735|ref|YP_001814195.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
 gi|171990256|gb|ACB61178.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
          Length = 228

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 15/173 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAAF 280
           LYIS   + G+P LVL+   +  +F  PV+          +  + ++  IA  S  +AA+
Sbjct: 67  LYIS--FMRGVPILVLL---FMFYFGLPVI---------NIQLDALTAAIAGFSLNSAAY 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+RS L++V RGQ EAA +LGL+  +    ++LPQA+R  IPPL++  L+L+K SSL
Sbjct: 113 MAEIIRSSLLSVDRGQQEAAQSLGLSRYRVFVGIILPQAVRLAIPPLSNVLLDLVKASSL 172

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   ++      +  +    + +  +  FIY  +  +IA     L  + A
Sbjct: 173 AAMITVPEIFQRAKIVGGREFDYMTVYFVIAFIYWGICAVIAAGQEMLERRFA 225


>gi|313894065|ref|ZP_07827631.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313441629|gb|EFR60055.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 218

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++ EI R G+ ++ RGQ E A  LG T+ +  R ++LPQ  + ++PPL ++ +NLLK+
Sbjct: 100 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYSQTMRKIILPQMFKRVLPPLANETINLLKD 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SL   +   D++ +  +I+ Q    I   L+    YL  + ++    N L  + A+ E 
Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAAIFYLIFTFILTNIFNYLERRFAVYED 218


>gi|300694623|ref|YP_003750596.1| amino-acid ABC transporter protein [Ralstonia solanacearum PSI07]
 gi|299076660|emb|CBJ35998.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           PSI07]
          Length = 230

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 17/163 (10%)

Query: 193 SFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F LG+VLS  L   RLSR+   +  + + + ++S   I G P L+ + L Y  +   P+
Sbjct: 36  AFALGLVLSIVLLWARLSRY---RILRGMVMAWVSA--IRGTPALIHMLLAY--YVVPPL 88

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG        ++SP    +  AL+C T+A++ EI+R  L +VP  Q  AA ALG+   + 
Sbjct: 89  LGL-------SISPLAAGIG-ALACNTSAYLVEILRGALSSVPDTQRAAAQALGMREPQV 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            R VLLPQ     IPPLTS++  LLK SSL   +   +L +V 
Sbjct: 141 WRHVLLPQVFYRAIPPLTSEFTILLKASSLMSIIAVPELATVA 183


>gi|227113999|ref|ZP_03827655.1| L-amino acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 362

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+T+     +L + +  + +A++AE+VR GL A+P+GQ EAA +LGL + +   LV+LPQ
Sbjct: 220 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 278

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A++ +IP L +  ++L K++SL + +G  DL S
Sbjct: 279 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 311


>gi|222102076|ref|YP_002546666.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84]
 gi|221728193|gb|ACM31202.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84]
          Length = 218

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 74/124 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+  ++A++AEIVR G +AVP G  EA +A+GL   +    ++ P A R ++P L +Q
Sbjct: 94  IALTVNSSAYLAEIVRGGFMAVPHGLREAGLAMGLPLHRVLLYIIGPVAFRRMVPALGNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK++SL + +G A+L   G  I+ +  +A+EI      IYL +  ++A+    +  
Sbjct: 154 FIIGLKDTSLLIVIGVAELTRTGQEIMTENYRAVEIWAAVGVIYLVIISIMAIIFRVIEK 213

Query: 391 KIAL 394
           +I +
Sbjct: 214 RIQM 217


>gi|331014304|gb|EGH94360.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 220

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFVVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++P  + +++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLHNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|257455524|ref|ZP_05620756.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK
           [Enhydrobacter aerosaccus SK60]
 gi|257447093|gb|EEV22104.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK
           [Enhydrobacter aerosaccus SK60]
          Length = 223

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 66/106 (62%), Gaps = 4/106 (3%)

Query: 245 HFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +F  P++  +N + G+  T+   F S  +A   + AA+ +EIVR+G+ ++ +GQ+ AA A
Sbjct: 73  YFAVPMV--YNLVTGTYLTLDTAFTSCVVAFMVFEAAYFSEIVRAGIQSIGKGQVNAAKA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           LG+T+ +  R ++LPQA R + P L  Q + L ++++L  A+G  D
Sbjct: 131 LGMTYGQTMRFIILPQAFRKMFPLLLQQSIILFQDTTLVFAIGLVD 176


>gi|307328905|ref|ZP_07608074.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306885415|gb|EFN16432.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 297

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-------LIALKYQLH 245
            F LGIVL+    RLSR    K+   +   YI  F    +P +V       L  L  +L 
Sbjct: 92  GFALGIVLAFM--RLSRSPFLKS---VAFTYIWAFR--SIPLIVQLLFWFNLTYLYKRLD 144

Query: 246 FDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           F  P   G F+F     V     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG
Sbjct: 145 FGIPFGPGFFSFDTAGLVG-AMSAAVLGLALHQAAYAAEIVRGGVLAVDGGQLEAAAALG 203

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      I  + G+ +
Sbjct: 204 IPRLRQLRRIVLPQAMRSILPNAANEVISLFKGTSIVSVMAIGELFYQVQVIYGRNGRVV 263

Query: 365 EIILIWMFIYLSLSIMIAL 383
            ++++    Y+ L+ ++++
Sbjct: 264 PLLMVATVWYIILTTVLSI 282


>gi|307329225|ref|ZP_07608390.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306885124|gb|EFN16145.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 314

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 113/215 (52%), Gaps = 37/215 (17%)

Query: 185 TNAKIF----VFSFVLGIVLSLFATRLSRHFHEK---TG-----KALPLLYISTFLIFGL 232
           T  K+F    V S  LG++L++   RLS H   +   TG     +A+PLL I+ ++++  
Sbjct: 69  TTLKVFAVAAVLSLALGVLLAV--GRLSDHKAVRWFATGFIELFRAVPLL-ITIYVLW-- 123

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
               ++ L Y+           + +G S  +  F +L I L+ Y  +  AE++R+G+ +V
Sbjct: 124 ----VLFLTYR-----------SDLGLSGDNTGFWALVIGLTVYNGSVQAEVLRAGINSV 168

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-----A 347
           PRGQ EAA ALG+   +    VL+PQA+R+++P + SQ +  LK++SL   + +      
Sbjct: 169 PRGQREAAYALGMRKTQVMMTVLVPQAVRAMLPTIISQLVVTLKDTSLGYVITYQELLFQ 228

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
                G  ++N     + +I++   IY+++ + ++
Sbjct: 229 LQQLAGNIVVNDDNPYVPVIIVGGAIYIAMCLALS 263



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 35/63 (55%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T+I  G V T  +     + +  +G L+  GRLS +K V W    ++E+FR +P L+ I+
Sbjct: 61  TSIRDGVVTTLKVFAVAAVLSLALGVLLAVGRLSDHKAVRWFATGFIELFRAVPLLITIY 120

Query: 147 FLY 149
            L+
Sbjct: 121 VLW 123


>gi|302338912|ref|YP_003804118.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636097|gb|ADK81524.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 260

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 4/132 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   S  +ALS +  A+ +EI+R  + ++ +GQ EAA +LG +       ++LPQA+R+ 
Sbjct: 128 PATPSAILALSLFEGAYTSEILRGAIFSISKGQWEAAYSLGFSSGDLYCRIILPQALRTS 187

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSI 379
           +P L +Q +N +K+S+L   +   DL   G  II++T    EI      I++ I L L +
Sbjct: 188 LPALANQAINTVKDSALVSTIAIYDLTMRGREIISETFLTFEIWFTVAAIYLLITLGLQL 247

Query: 380 MIALFMNRLNAK 391
            I L    LN++
Sbjct: 248 CIHLIDRSLNSR 259



 Score = 43.1 bits (100), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W++   ++ + +IGTL    RLS   +   I R+YV + RN P L+ +FF+
Sbjct: 58  LLRGLGVTLWISLISLLFSFLIGTLTLLARLSEGIVAPVIARLYVSLIRNTPLLIQLFFI 117

Query: 149 YKSVLSVLPIP-DHSIVLPFGMF 170
           Y  +  V  IP   S +L   +F
Sbjct: 118 YFVIAPVFNIPATPSAILALSLF 140


>gi|262191874|ref|ZP_06050043.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|262032239|gb|EEY50808.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
          Length = 265

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 84/158 (53%), Gaps = 14/158 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI+  ++   P LV I L Y +    PV+G             F +
Sbjct: 89  RQSRSLVGRALGTGYIA--VVRNTPLLVQIYLLYFVF--GPVIG----------LDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++ ++L+KNSS+   +   DL + G  I+++T    EI
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEI 232


>gi|163858457|ref|YP_001632755.1| putative ABC-type amino acid transporter, permease component
           [Bordetella petrii DSM 12804]
 gi|163262185|emb|CAP44487.1| putative ABC-type amino acid transporter, permease component
           [Bordetella petrii]
          Length = 231

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 12/187 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T  + PL ++S+  +     + LI + +  +F  PV+  F         P F +   A+
Sbjct: 50  RTSGSAPLKWLSSAWVHTFRAIPLIMIVFWAYFLLPVMIGFEV-------PPFSTALAAI 102

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +AF+AEIVR+G+ +VP GQ+EAA A+GL + +    V LPQA+ ++IP L +Q+++
Sbjct: 103 IVYESAFLAEIVRAGIQSVPAGQVEAARAVGLGYFQTLWSVQLPQALSNMIPSLVNQFVS 162

Query: 334 LLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +K +S+   +G  +       I  I  TG A+   L+    Y  L  +++    RL  +
Sbjct: 163 TIKATSIVYIIGVQEAAFSAQQINSIELTG-ALRTYLVLALFYFLLCALLSRLARRL--E 219

Query: 392 IALKEKK 398
           + L+ K+
Sbjct: 220 LHLQHKR 226



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+    + GF  T  LA  G+  A     ++G  R S +  + W+   +V  FR IP +
Sbjct: 15  GSWPNGPIGGFAGTLILAALGLAGAFPAALVIGVARTSGSAPLKWLSSAWVHTFRAIPLI 74

Query: 143 VVIFFLY 149
           +++F+ Y
Sbjct: 75  MIVFWAY 81


>gi|81299059|ref|YP_399267.1| amino acid ABC transporter permease [Synechococcus elongatus PCC
           7942]
 gi|81167940|gb|ABB56280.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus elongatus PCC 7942]
          Length = 396

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A++AE VR GL A+P+GQ EAA ALGL   +  R ++LPQA+R  IP +   
Sbjct: 268 VGLTIFLSAYLAETVRGGLQAIPQGQFEAAAALGLNLFQTYRFIVLPQALRISIPAIVGL 327

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387
           +LNLL++++L   VG  +L+ +  +I+      G+  E+ L    +Y      +A    R
Sbjct: 328 FLNLLQDTTLLSIVGLLELLGISRSILANPAYLGRYAEVYLFLGVLYWLCCYGLAQLSRR 387

Query: 388 LNAKI 392
           L  ++
Sbjct: 388 LEQRL 392


>gi|319793874|ref|YP_004155514.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315596337|gb|ADU37403.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 352

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 53/83 (63%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ + AA++AEI+R GL AVPRGQ E A+ALG       R ++LPQA+R ++P LT+  
Sbjct: 223 GLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQRDIVLPQALRLVVPALTNSV 282

Query: 332 LNLLKNSSLAVAVGFADLVSVGG 354
           +  LK++SL   VG  +L    G
Sbjct: 283 VGTLKDTSLVTVVGLFELTGALG 305


>gi|315160767|gb|EFU04784.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315579366|gb|EFU91557.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
          Length = 546

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 316 MFLRGTGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516


>gi|296313423|ref|ZP_06863364.1| amino acid ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
 gi|296840055|gb|EFH23993.1| amino acid ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
          Length = 219

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  
Sbjct: 92  ALVFLGASYMAEAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANI 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+  AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +
Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211

Query: 392 I 392
           I
Sbjct: 212 I 212


>gi|293608329|ref|ZP_06690632.1| predicted protein [Acinetobacter sp. SH024]
 gi|292828902|gb|EFF87264.1| predicted protein [Acinetobacter sp. SH024]
 gi|325121937|gb|ADY81460.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 280

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 74/123 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E +R+G+  V RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 150 ALGLYTAARVSEHIRAGINTVSRGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEA 209

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYSIKFVMAWIEKR 269

Query: 392 IAL 394
           +A+
Sbjct: 270 MAV 272



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           G     W A    + A ++G+L+G  R   NK +A+I   YVE+FRNIP +V +FF
Sbjct: 54  GVFTMVWTAIIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109


>gi|257882304|ref|ZP_05661957.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|294623622|ref|ZP_06702460.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           U0317]
 gi|257817962|gb|EEV45290.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|291596948|gb|EFF28161.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           U0317]
          Length = 213

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 41/221 (18%)

Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231
           T  K+F+F+ +    LGIVL+L    LS HF         +    +  PLL    F+ +G
Sbjct: 17  TTLKLFLFTLIGSLPLGIVLAL---GLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFIFYG 73

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LPT+ ++       FD+                 F +  IA     AA+ AEI R G+ +
Sbjct: 74  LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 109

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +G  D++ 
Sbjct: 110 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 169

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G   + +    + ++ + + IYL+L+ ++ + M ++  K+
Sbjct: 170 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIIMKQVEGKL 209


>gi|257088688|ref|ZP_05583049.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|256997500|gb|EEU84020.1| ABC amino acid transporter [Enterococcus faecalis CH188]
          Length = 507

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 277 MFLRGTGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477


>gi|238798510|ref|ZP_04641989.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia mollaretii ATCC 43969]
 gi|238717672|gb|EEQ09509.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia mollaretii ATCC 43969]
          Length = 367

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 54/76 (71%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +LGL + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|150378347|ref|YP_001314941.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150032894|gb|ABR65008.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 384

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 60/88 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   I +S + +A++AE+VR GL A+P+GQ E A +LGL++ +    ++LPQA++ +I
Sbjct: 247 KFLRALIGVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMGFIVLPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ L K++SL   +G  DL+ +
Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334


>gi|260662189|ref|ZP_05863085.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
 gi|260553572|gb|EEX26464.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
          Length = 223

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 32/210 (15%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHF 246
           F  ++G V  +  T  SR       + +  LY+  F I  +PT+VL+ L Y     QLH 
Sbjct: 35  FGLIVGTVFGVLRTTKSRVL-----RFILRLYLEIFRI--IPTVVLLFLVYYILPRQLHI 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P               ++M++ +A S + AA  ++IVR  + +VP+ Q E+ +A+GLT
Sbjct: 88  NMP--------------ADWMAV-LAFSLWVAAEFSDIVRGAIQSVPQHQRESGLAIGLT 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +LLPQAM+  +P   +    ++K +SL + +   D+++VG  II         
Sbjct: 133 RFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNSTYPT 192

Query: 367 ILIWM-----FIYLSLSIMIALFMNRLNAK 391
            + W+     F+Y  +  +++L+  +L A+
Sbjct: 193 GVFWVYGLIFFLYFIVDYLLSLWARKLTAR 222



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 42/68 (61%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S  + ++ G   + W+A   +    I+GT+ G  R + ++++ +I R+Y+E+FR IP 
Sbjct: 11  EGSNFSRLMGGLWVSVWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPT 70

Query: 142 LVVIFFLY 149
           +V++F +Y
Sbjct: 71  VVLLFLVY 78


>gi|229587873|ref|YP_002869992.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359739|emb|CAY46588.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 229

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)

Query: 195 VLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +LG++L+  L   R S+ ++ ++   LP  YI  F   G P LV + L Y        L 
Sbjct: 29  ILGLILAIPLGVARASKRWYVRS---LPYAYI--FFFRGTPLLVQLFLVYY------GLA 77

Query: 253 QFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           QF+ +  S + P     F      ++ +TAA+IAEI+R  + A+P G++EAA ALG++  
Sbjct: 78  QFDAVRTSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSKP 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           K    ++LP+A R  +P  +++ + +LK SSLA  V   +L  +  TII +    +++  
Sbjct: 138 KTLFYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMARTIIARNYLTVDMFF 197

Query: 369 IWMFIYLSLSIMI 381
                YL +S ++
Sbjct: 198 TAGVFYLLMSYLL 210


>gi|224367957|ref|YP_002602120.1| GltK1 [Desulfobacterium autotrophicum HRM2]
 gi|223690673|gb|ACN13956.1| GltK1 [Desulfobacterium autotrophicum HRM2]
          Length = 218

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 96/174 (55%), Gaps = 11/174 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y +T  I  + T  LI + + L+F  P+      I G  +  +F S  IA   + A++ A
Sbjct: 53  YPATLFINLMRTQPLILVIFWLYFLMPL------ILGKPIG-DFTSASIAFILFEASYFA 105

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++P+GQ EAA + G T+ +  R  ++PQA+++++P L +Q + + +++SLA 
Sbjct: 106 EIIRAGIQSIPKGQAEAAYSSGFTYWQTMRYFIIPQALKNMLPSLITQGVVVFQDTSLAY 165

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G  + +     +  +  ++ E+ L    +YL    ++   ++R+  ++ LK 
Sbjct: 166 VIGLREFLRSANVVDAREMRSFELYLFVGLVYL----LVCFSISRIGKRMELKR 215


>gi|150396325|ref|YP_001326792.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150027840|gb|ABR59957.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 384

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 60/88 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   I +S + +A++AE+VR GL A+P+GQ E A +LGL++ +    ++LPQA++ +I
Sbjct: 247 KFLRALIGVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMGFIVLPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ L K++SL   +G  DL+ +
Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334


>gi|322390972|ref|ZP_08064478.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142347|gb|EFX37819.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 520

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G++AV  GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G TI  Q  Q      I   IY+ L+  I
Sbjct: 443 INIKDTSVLNVISVVELYFTGNTIATQNYQYFPTFTIIAVIYIVLTFTI 491


>gi|315303607|ref|ZP_07874151.1| probable amino-acid ABC transporter permease protein YckA [Listeria
           ivanovii FSL F6-596]
 gi|313628027|gb|EFR96616.1| probable amino-acid ABC transporter permease protein YckA [Listeria
           ivanovii FSL F6-596]
          Length = 213

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           ++++A     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFLAFILNYAAYFAEIFRGGFLSIESGQYESAKVLGLTYAQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|307278646|ref|ZP_07559716.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306504706|gb|EFM73906.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
          Length = 546

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516


>gi|50119203|ref|YP_048370.1| L-amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609729|emb|CAG73163.1| L-amino acid ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 364

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+T+     +L + +  + +A++AE+VR GL A+P+GQ EAA +LGL + +   LV+LPQ
Sbjct: 222 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 280

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A++ +IP L +  ++L K++SL + +G  DL S
Sbjct: 281 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 313


>gi|331697742|ref|YP_004333981.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
 gi|326952431|gb|AEA26128.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
          Length = 215

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 78/129 (60%), Gaps = 6/129 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    I L  YTAAF+ E++RSG+  VP GQ EA+ ALG    +    +++PQA+R+++P
Sbjct: 85  FTRACIGLILYTAAFVCEVLRSGINTVPVGQAEASRALGFGFNQTLTTIVMPQAVRAVVP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFI-YLSLSIMIA 382
           PLT+  + LLKN++  +A GF+ +   GG    +++ G  + + L+W+ + +L L + + 
Sbjct: 145 PLTNVQIALLKNTT--IASGFS-VFQAGGIYQELSENGYNVLVGLLWIALGFLILVVPLT 201

Query: 383 LFMNRLNAK 391
           L    L+ +
Sbjct: 202 LLQRNLDRR 210


>gi|300119246|ref|ZP_07056940.1| amino acid ABC transporter, permease protein [Bacillus cereus SJ1]
 gi|298723354|gb|EFI64102.1| amino acid ABC transporter, permease protein [Bacillus cereus SJ1]
          Length = 232

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 33  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 87  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 47  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87


>gi|255024101|ref|ZP_05296087.1| hypothetical protein LmonocyFSL_12858 [Listeria monocytogenes FSL
           J1-208]
          Length = 125

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 71/114 (62%), Gaps = 1/114 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+
Sbjct: 8   AAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKD 67

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +L  +
Sbjct: 68  SSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAVLTVLFKQLEKR 120


>gi|261819587|ref|YP_003257693.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261603600|gb|ACX86086.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 364

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 1/93 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+T+     +L + +  + +A++AE+VR GL A+P+GQ EAA +LGL + +   LV+LPQ
Sbjct: 222 GTTIDKLLRAL-VGVILFQSAYVAEVVRGGLQALPKGQYEAAESLGLGYWRMQGLVILPQ 280

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A++ +IP L +  ++L K++SL + +G  DL S
Sbjct: 281 ALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFS 313


>gi|254804666|ref|YP_003082887.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha14]
 gi|254668208|emb|CBA04964.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha14]
          Length = 227

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219

Query: 391 K 391
           +
Sbjct: 220 R 220


>gi|227520033|ref|ZP_03950082.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229546924|ref|ZP_04435649.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229550512|ref|ZP_04439237.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293382718|ref|ZP_06628643.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|293388099|ref|ZP_06632627.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|307268500|ref|ZP_07549875.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307276436|ref|ZP_07557559.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307286974|ref|ZP_07567049.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312908613|ref|ZP_07767555.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312909239|ref|ZP_07768096.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312952647|ref|ZP_07771511.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|227072581|gb|EEI10544.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229304369|gb|EEN70365.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229307852|gb|EEN73839.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|291079878|gb|EFE17242.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|291082550|gb|EFE19513.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|306501920|gb|EFM71209.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306506916|gb|EFM76063.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306515161|gb|EFM83701.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310625400|gb|EFQ08683.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310629435|gb|EFQ12718.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|311290481|gb|EFQ69037.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|315026795|gb|EFT38727.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315032967|gb|EFT44899.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315147131|gb|EFT91147.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315153569|gb|EFT97585.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315156251|gb|EFU00268.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315158604|gb|EFU02621.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315165862|gb|EFU09879.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315171420|gb|EFU15437.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315172654|gb|EFU16671.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|327534044|gb|AEA92878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 546

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516


>gi|167748300|ref|ZP_02420427.1| hypothetical protein ANACAC_03044 [Anaerostipes caccae DSM 14662]
 gi|167652292|gb|EDR96421.1| hypothetical protein ANACAC_03044 [Anaerostipes caccae DSM 14662]
          Length = 226

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 109/209 (52%), Gaps = 28/209 (13%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPL---LYISTFLIFGLPTLVLIALKYQL---HFDKP 249
           LG VL+L      R   EK GK+  L    Y+   +I G PT+  + + + +     D  
Sbjct: 40  LGTVLALM-----RLTAEKKGKSTVLSKIAYVYIDIIRGTPTVTQLMIMFFVILKGVDGL 94

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++G   F                    +AA+++EI+R+G++AV +GQME   +LGL++ +
Sbjct: 95  IVGTVTF-----------------GLNSAAYVSEIIRAGILAVDQGQMEGGRSLGLSYGQ 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + ++LPQA+++I+P L ++++ L+K +++   V   DL      +I++T +A+  ++ 
Sbjct: 138 TMKDIILPQAIKNILPALGNEFIVLIKETAILGYVSIVDLSKAADFVISRTYEALTPLIG 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IY  +  ++ L +N +  ++   +K+
Sbjct: 198 TAVIYYLIVKVLTLVLNAVERRLRQSDKR 226


>gi|307274211|ref|ZP_07555419.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307291685|ref|ZP_07571560.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312904644|ref|ZP_07763799.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|306497304|gb|EFM66846.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306509173|gb|EFM78235.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|310631996|gb|EFQ15279.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|315028836|gb|EFT40768.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315145376|gb|EFT89392.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 546

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516


>gi|282849230|ref|ZP_06258615.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|282580934|gb|EFB86332.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
          Length = 218

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++ EI R G+ ++ RGQ E A  LG T+ +  R ++LPQ  + ++PPL ++ +NLLK+
Sbjct: 100 AAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLLKD 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SL   +   D++ +  +I+ Q    I   L+    YL  + ++    N L  + A+ E 
Sbjct: 160 TSLVYVLAMNDILRITKSIV-QRDFDISAFLVAALFYLIFTFILTNIFNYLERRFAVYED 218


>gi|225076169|ref|ZP_03719368.1| hypothetical protein NEIFLAOT_01201 [Neisseria flavescens
           NRL30031/H210]
 gi|224952512|gb|EEG33721.1| hypothetical protein NEIFLAOT_01201 [Neisseria flavescens
           NRL30031/H210]
          Length = 219

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  
Sbjct: 92  ALVFLGASYMAEAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANI 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+  AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +
Sbjct: 152 LFLMKETSVISAVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENR 211

Query: 392 I 392
           I
Sbjct: 212 I 212


>gi|307942364|ref|ZP_07657715.1| general L-amino acid transport system permease protein AapM
           [Roseibium sp. TrichSKD4]
 gi|307774650|gb|EFO33860.1| general L-amino acid transport system permease protein AapM
           [Roseibium sp. TrichSKD4]
          Length = 384

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 60/87 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL       L++LPQA++ +I
Sbjct: 246 KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILPQALKLVI 305

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351
           P + + ++ L K+++L + VG  DL+ 
Sbjct: 306 PGIVNTFIGLFKDTTLVLIVGMFDLLG 332


>gi|282599865|ref|ZP_06257391.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
 gi|282567427|gb|EFB72962.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 175

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 79/134 (58%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  AL+  T+A++A  V++G++A+ +GQ  A ++LG    +    ++LPQA+R +
Sbjct: 19  PGITAVVCALALITSAYLAHAVKAGILAIGKGQWHAGMSLGFNRWQVLGYIVLPQALRMM 78

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG A+L  +   + N +    +E+ L   FIY  + + + 
Sbjct: 79  VPSFINQWVALIKDTSLAYIVGVAELSFLATQVNNREMVYPLEVFLFVAFIYFVMCLSVE 138

Query: 383 LFMNRLNAKIALKE 396
           +  N++  K++ K 
Sbjct: 139 IIANQIAKKLSDKN 152


>gi|157145290|ref|YP_001452609.1| hypothetical protein CKO_01027 [Citrobacter koseri ATCC BAA-895]
 gi|157082495|gb|ABV12173.1| hypothetical protein CKO_01027 [Citrobacter koseri ATCC BAA-895]
          Length = 222

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 104/208 (50%), Gaps = 20/208 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L           +    LP+ +++ F I       LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM----------RMSPLLPVRWLARFYISIFRGTPLIAQLFMIYYGLPQF 81

Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G + + I  +          I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  + 
Sbjct: 82  GIELDPIPAAM---------IGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQT 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R  +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L  
Sbjct: 133 LRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             IY  ++ +++   N    ++  +E+ 
Sbjct: 193 SLIYWVMATVLSALQNYFEEQLNRQERD 220



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFILALMRMSPLLPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107


>gi|15640041|ref|NP_062593.1| amino acid ABC transproter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121591472|ref|ZP_01678745.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121730358|ref|ZP_01682715.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147675477|ref|YP_001218403.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153212968|ref|ZP_01948562.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|153819843|ref|ZP_01972510.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|227080246|ref|YP_002808797.1| amino acid ABC transproter, permease protein [Vibrio cholerae
           M66-2]
 gi|229508295|ref|ZP_04397799.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229508866|ref|ZP_04398357.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229515951|ref|ZP_04405408.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229517137|ref|ZP_04406583.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229520182|ref|ZP_04409609.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229530204|ref|ZP_04419593.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229606569|ref|YP_002877217.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254291130|ref|ZP_04961927.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|254851574|ref|ZP_05240924.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255746808|ref|ZP_05420754.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262167098|ref|ZP_06034813.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|297581956|ref|ZP_06943876.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|298501195|ref|ZP_07010994.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9654400|gb|AAF93187.1| amino acid ABC transproter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121546674|gb|EAX56856.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121627889|gb|EAX60471.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|124116194|gb|EAY35014.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|126509604|gb|EAZ72198.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|146317360|gb|ABQ21899.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|150422975|gb|EDN14925.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|227008134|gb|ACP04346.1| amino acid ABC transproter, permease protein [Vibrio cholerae
           M66-2]
 gi|227011988|gb|ACP08198.1| amino acid ABC transproter, permease protein [Vibrio cholerae O395]
 gi|229332337|gb|EEN97824.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229342776|gb|EEO07767.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229346200|gb|EEO11172.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229347051|gb|EEO12013.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229354141|gb|EEO19073.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229354568|gb|EEO19490.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229369224|gb|ACQ59647.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254847279|gb|EET25693.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255735565|gb|EET90964.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262024484|gb|EEY43170.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|297533823|gb|EFH72664.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297540067|gb|EFH76129.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|327482922|gb|AEA77329.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 223

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 13/170 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241
           + T  ++  +  V  ++L+LF   + R F       L  LYIS F   G P LV L  L 
Sbjct: 19  LGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLLY 75

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L    P+L   +          F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 76  YGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|320011628|gb|ADW06478.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 300

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 78/128 (60%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   +  R ++LPQAMRSI+P   ++
Sbjct: 173 LGLALHQAAYAAEIVRGGVLAVDGGQLEAAAALGIPRLRQLRRIVLPQAMRSILPNAANE 232

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
            ++L K +S+   +   +L      +  + G+ + ++++    Y+ L+ ++++   ++ R
Sbjct: 233 IISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATVWYILLTTVLSVLQHYVER 292

Query: 388 LNAKIALK 395
             AK A++
Sbjct: 293 HYAKGAVR 300


>gi|289803650|ref|ZP_06534279.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 189

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 75/128 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ 
Sbjct: 60  IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNS 119

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   N    
Sbjct: 120 FISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEN 179

Query: 391 KIALKEKK 398
           ++  +E++
Sbjct: 180 QLNRQERE 187


>gi|329577432|gb|EGG58881.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 546

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516


>gi|255974748|ref|ZP_05425334.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256964171|ref|ZP_05568342.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis HIP11704]
 gi|255967620|gb|EET98242.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256954667|gb|EEU71299.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis HIP11704]
          Length = 507

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 277 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477


>gi|255971748|ref|ZP_05422334.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|256618341|ref|ZP_05475187.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis ATCC 4200]
 gi|256762043|ref|ZP_05502623.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256956823|ref|ZP_05560994.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis DS5]
 gi|256960629|ref|ZP_05564800.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|257078493|ref|ZP_05572854.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|257084184|ref|ZP_05578545.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis Fly1]
 gi|257088011|ref|ZP_05582372.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|257417614|ref|ZP_05594608.1| ABC-type amino acid transport system [Enterococcus faecalis
           AR01/DG]
 gi|255962766|gb|EET95242.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|256597868|gb|EEU17044.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis ATCC 4200]
 gi|256683294|gb|EEU22989.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256947319|gb|EEU63951.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis DS5]
 gi|256951125|gb|EEU67757.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|256986523|gb|EEU73825.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|256992214|gb|EEU79516.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis Fly1]
 gi|256996041|gb|EEU83343.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|257159442|gb|EEU89402.1| ABC-type amino acid transport system [Enterococcus faecalis
           ARO1/DG]
          Length = 507

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 277 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477


>gi|118476507|ref|YP_893658.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|225862824|ref|YP_002748202.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|118415732|gb|ABK84151.1| amino acid ABC transporter membrane protein, PAAT family [Bacillus
           thuringiensis str. Al Hakam]
 gi|225788606|gb|ACO28823.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
          Length = 234

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 35  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 89  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 141 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 177



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 49  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 89


>gi|22537749|ref|NP_688600.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76787814|ref|YP_330227.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798453|ref|ZP_00780691.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|22534640|gb|AAN00473.1|AE014265_2 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76562871|gb|ABA45455.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76586187|gb|EAO62707.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
          Length = 221

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 20/200 (10%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG- 252
           F+LG ++  F   L +  H +  + L  ++IS  L+ G+P +VL+ L Y   F  P +G 
Sbjct: 35  FILGAIVGFFVA-LMKMSHFRLLRYLANIHIS--LMRGIPLMVLLFLIY---FGLPFIGI 88

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q + +  S V    MS         +A+I+EI+R+ L+AV  GQ EAA ALGL      R
Sbjct: 89  QLDAVTASIVGFTMMS---------SAYISEIIRAALLAVDHGQWEAARALGLKTPTIYR 139

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIIL 368
            +++PQA R  +P L++  L+++K+SSL   +   D+ +    VGGT  +     I + L
Sbjct: 140 GIIIPQATRIALPSLSNVLLDMVKSSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVAL 199

Query: 369 IWMFIYLSLSIMIALFMNRL 388
           I+  I    +I+   +  RL
Sbjct: 200 IYWVICTLYAIIQDWWEKRL 219


>gi|314940259|ref|ZP_07847432.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314941683|ref|ZP_07848562.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314947673|ref|ZP_07851082.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314950660|ref|ZP_07853740.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314992473|ref|ZP_07857894.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996867|ref|ZP_07861872.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313589010|gb|EFR67855.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313592933|gb|EFR71778.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313597207|gb|EFR76052.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313599455|gb|EFR78298.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640579|gb|EFS05159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313645914|gb|EFS10494.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 237

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 41/221 (18%)

Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHFHEK---------TGKALPLLYISTFLIFG 231
           T  K+F+F+ +    LGIVL+L    LS HF              +  PLL    F+ +G
Sbjct: 41  TTLKLFLFTLIGSLPLGIVLAL---GLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFIFYG 97

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LPT+ ++       FD+                 F +  IA     AA+ AEI R G+ +
Sbjct: 98  LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 133

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +G  D++ 
Sbjct: 134 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 193

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G   + +    + ++ + + IYL+L+ ++ + M ++  K+
Sbjct: 194 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 233


>gi|218458307|ref|ZP_03498398.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli Kim 5]
          Length = 121

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 62/93 (66%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           LYD R+  I  QI+  +LL     W  +N   N+ ++N++ G GFL+ RAGFE+ Q ++ 
Sbjct: 28  LYDPRIRGIFFQILTIVLLVAFVWWVAHNTAVNLARANIASGFGFLNGRAGFEVGQSLIA 87

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111
           Y+SDS+Y  A+LVG +NT  +A +G+I ATIIG
Sbjct: 88  YSSDSTYGRALLVGLLNTLLIAVTGIITATIIG 120


>gi|319892895|ref|YP_004149770.1| Glutamate ABC transporter, periplasmic glutamine- binding protein
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162591|gb|ADV06134.1| Glutamate ABC transporter, periplasmic glutamine- binding protein
           [Staphylococcus pseudintermedius HKU10-03]
          Length = 486

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 62/85 (72%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   IAL    +A+IAEI+R+G+ AV +GQMEAA +LGL++ +  + V++PQA++ I+P
Sbjct: 356 FICGAIALVINCSAYIAEIIRAGINAVDKGQMEAARSLGLSYSQTMKSVIMPQAIKKILP 415

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            L ++++ ++K SS+   +G ++++
Sbjct: 416 ALGNEFVTVIKESSIVSVIGVSEIM 440


>gi|315036620|gb|EFT48552.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
          Length = 546

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516


>gi|301065633|ref|YP_003787656.1| amino acid ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|300438040|gb|ADK17806.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei str. Zhang]
          Length = 237

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 33/191 (17%)

Query: 188 KIFVFSFVLGIVLSLFA--TRLS-------------RHFHEKTGKALPLLYISTFLIFGL 232
            I + SF +G++++L    TR+S               F+    ++ PLL     + FGL
Sbjct: 22  SIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVFFGL 81

Query: 233 PTLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P+L++  +  + +  D  V G   F                 S  T A+ +E +R+ L++
Sbjct: 82  PSLIIPGIFPHGIKLDPVVAGIITF-----------------SLNTGAYCSETIRAALLS 124

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQ EAA ++GL  R   R +++PQA+R+ +PPL++ +++L+K++SLA ++   ++  
Sbjct: 125 IDHGQWEAAYSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQ 184

Query: 352 VGGTIINQTGQ 362
           V   I  +  Q
Sbjct: 185 VSQQIAAENYQ 195


>gi|238765551|ref|ZP_04626464.1| ABC-type amino acid transport system permease component [Yersinia
           kristensenii ATCC 33638]
 gi|238696229|gb|EEP89033.1| ABC-type amino acid transport system permease component [Yersinia
           kristensenii ATCC 33638]
          Length = 251

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 111/218 (50%), Gaps = 15/218 (6%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPT 234
           +FP   +   A   + S + G+  ++  T L       +G    +L  + FL F   +P 
Sbjct: 17  TFPDGPLGGAALTLLISLLAGVASAILGTVLGVVLAMSSGVWAGIL--AAFLGFFRAIPV 74

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+  
Sbjct: 75  IMLI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIMAIGA 124

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +  
Sbjct: 125 GQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLAT 184

Query: 355 TIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            + N++    +E+ L    +Y  L + + L  N LN +
Sbjct: 185 QVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR 222


>gi|254501118|ref|ZP_05113269.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222437189|gb|EEE43868.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 383

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 60/87 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL       L++LPQA++ +I
Sbjct: 245 KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILPQALKLVI 304

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS 351
           P + + ++ L K+++L + VG  DL+ 
Sbjct: 305 PGIVNTFIGLFKDTTLVLIVGMFDLLG 331


>gi|213650338|ref|ZP_03380391.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 184

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 75/128 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ 
Sbjct: 55  IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNS 114

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   N    
Sbjct: 115 FISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEN 174

Query: 391 KIALKEKK 398
           ++  +E++
Sbjct: 175 QLNRQERE 182


>gi|81429106|ref|YP_396106.1| putative glutamine/glutamate ABC transporter,
           membrane-spanning/substrate-binding subunit precursor
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78610748|emb|CAI55799.1| Putative glutamine/glutamate ABC transporter,
           membrane-spanning/substrate-binding subunit precursor
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 478

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 39/233 (16%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGI---VLSLFATRLSRHFHE 213
           DHS    FG+   N+G     L      T   IF F+ + G+   +L +   + +R   +
Sbjct: 262 DHSF---FGLLKENKGAILDGLGQTLLLTVIAIF-FATIFGVFFGLLGVLPNKFARAVSD 317

Query: 214 KT---GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 + LPLL ++ F+  G+P+L                       G  + P  ++  
Sbjct: 318 TVIYIFRGLPLLVLALFIYTGIPSLT----------------------GQKI-PAMVAGV 354

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+ A  V+ G+ AV  GQMEAA +LGL + KA R V+LPQ +R ++P   +Q
Sbjct: 355 ITLMFNEGAYTAAFVKGGIGAVSAGQMEAARSLGLPYGKAMRRVILPQGIRIMVPSFINQ 414

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           ++  LK++S+   +G  +L   G  II +    +E   IW  I L   I+I L
Sbjct: 415 FIITLKDTSILSIIGIVELTQAGKIIIARN---LEGFKIWGMIALIYLIVITL 464


>gi|238783037|ref|ZP_04627064.1| ABC-type amino acid transport system permease component [Yersinia
           bercovieri ATCC 43970]
 gi|238716038|gb|EEQ08023.1| ABC-type amino acid transport system permease component [Yersinia
           bercovieri ATCC 43970]
          Length = 254

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G++A+  GQ +A ++LG    +    V+LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLGFVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213

Query: 383 LFMNRLNAK 391
           L  N LN +
Sbjct: 214 LLANGLNRR 222


>gi|238782938|ref|ZP_04626966.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia bercovieri ATCC 43970]
 gi|238716141|gb|EEQ08125.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia bercovieri ATCC 43970]
          Length = 369

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 54/76 (71%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +LGL + K   LV+LPQA++ +IP L +  + L 
Sbjct: 243 FQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALF 302

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 303 KDTSLVIIIGLFDLFS 318


>gi|291482730|dbj|BAI83805.1| hypothetical protein BSNT_00597 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 226

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 15/173 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LYIS   + G+P LV++   + L+F  P +  QF+ +  +          I  S  +AA+
Sbjct: 65  LYIS--FMRGVPILVIL---FILYFGFPYISIQFSAVTAAL---------IGFSLNSAAY 110

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEI RS + +V +GQ EAA +LGL++ +  R ++LPQ++   +PPL +  L+L+K SSL
Sbjct: 111 IAEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIHIALPPLANVLLDLIKASSL 170

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +L+     I  +    + + ++   IY ++  + A+F N L  K A
Sbjct: 171 AAMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSIAAVFQNILEKKYA 223



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++F  M   T+IG  +   R+S   L+ W  ++Y+   R +P LV++F L
Sbjct: 23  VIKGIGYTLLISFVSMFAGTVIGLFISLARMSKLALLRWPAKLYISFMRGVPILVILFIL 82

Query: 149 Y 149
           Y
Sbjct: 83  Y 83


>gi|257418660|ref|ZP_05595654.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|257160488|gb|EEU90448.1| ABC amino acid transporter [Enterococcus faecalis T11]
          Length = 507

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 277 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477


>gi|227555893|ref|ZP_03985940.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|312901081|ref|ZP_07760370.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|227175060|gb|EEI56032.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|311291827|gb|EFQ70383.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315168140|gb|EFU12157.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315573554|gb|EFU85745.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315582098|gb|EFU94289.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 546

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 316 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 370

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 371 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 411

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 412 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 471

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 472 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 516


>gi|171778288|ref|ZP_02919494.1| hypothetical protein STRINF_00336 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282988|gb|EDT48412.1| hypothetical protein STRINF_00336 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 230

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 77/127 (60%), Gaps = 6/127 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++   AA I+E+ +S  +A+P+GQ+EA +++GL+  +    +LLPQA R  +P +TS 
Sbjct: 102 LAMTLLFAASISEVFKSSYLALPKGQLEAGLSIGLSEPQTFVRILLPQAFRIALPNITSA 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQAIE----IILIWMFIYLSLSIMIALF 384
            +NLLK+ +LA  +G  DL+  G  II  N    ++E    + +I+  + L LS++  + 
Sbjct: 162 VINLLKDIALAYTIGLVDLMGEGNLIISRNMGNYSLETYTAVAVIYWILALILSVVTHIV 221

Query: 385 MNRLNAK 391
            N+L  K
Sbjct: 222 ENQLETK 228


>gi|152968094|ref|YP_001363878.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
 gi|151362611|gb|ABS05614.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
          Length = 222

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 20/206 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+V++L    L R       + +   Y+S  +I G P LV + L Y        L 
Sbjct: 31  SFAIGMVIALVVA-LMRLSSVLVLQGIARFYVS--VIRGTPLLVQLFLIYY------ALP 81

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F    G+T  P F S  +A S     + +E+VR+ +++VPRGQ EAA+ +G+ +    R
Sbjct: 82  EF----GATWDP-FPSAVVAFSLNVGGYASEVVRAAILSVPRGQTEAALTIGMNYPTTMR 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-----AIEII 367
            ++LPQA R  +PPL++  ++L+K++SLA ++   +L+     I   T +     ++  +
Sbjct: 137 RIVLPQAARVAVPPLSNTLISLVKDTSLASSIQVVELLRKASEIAAPTYEFFALYSLAAV 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
             W+ + L LS        RLN  +A
Sbjct: 197 YYWI-VCLVLSFGQTRVETRLNRHVA 221


>gi|322372532|ref|ZP_08047068.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321277574|gb|EFX54643.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 226

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 92/161 (57%), Gaps = 15/161 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPV 250
           F  +LG+++SL      +    K  + L  LY+  F   G P +V I + + L H + P 
Sbjct: 30  FGTILGVLVSLI-----KRSGIKPLEWLVSLYVWVFR--GTPMVVQIMIAFNLIHMNLPT 82

Query: 251 LGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           + QF  +    S + P      I LS  + A+I+E VR+G+ ++P+GQ+EAA +LG+   
Sbjct: 83  V-QFGILNLDLSRIVPGI----IVLSLNSGAYISESVRAGIESIPKGQVEAAYSLGIRPW 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
              R V+LPQA+++I+P L ++++ ++K+SSL   +G  +L
Sbjct: 138 NTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTIGVMEL 178


>gi|317407116|gb|EFV87120.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 217

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ E +  LG+T+ +  R ++LPQ ++ +
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRIVLPQMVQRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLIMTLVLTW 203

Query: 384 FMNRLNAKIALKEK 397
           F  R+  + A  ++
Sbjct: 204 FFQRMEKRYAKYDQ 217


>gi|158425495|ref|YP_001526787.1| putative ABC amino acid transporter permease/substrate-binding
           protein [Azorhizobium caulinodans ORS 571]
 gi|158332384|dbj|BAF89869.1| putative ABC amino acid transporter permease/substrate-binding
           protein [Azorhizobium caulinodans ORS 571]
          Length = 227

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 6/177 (3%)

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSC 275
           L+ + F +F +P L  +   Y +L  + P+L Q  F F G   +     +F S  + LS 
Sbjct: 45  LFGAAFRLFSVPILSQLTFGYVELVRNTPILVQLFFIFYGLPAIGLGISQFWSGVLCLSL 104

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A+  E +R GL+ + +G  EAA +L L+ R+  RLV LP A+R+ +P + +  ++LL
Sbjct: 105 WAGAYQVENIRGGLLTIEKGLKEAAFSLSLSLRQYFRLVALPLAIRTSLPSMLNTSISLL 164

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           KNSS   A+G A++  +    I    +A+E+      +YL+L I+++L  + +  K+
Sbjct: 165 KNSSYLQAIGLAEMTFIAVDRIATDFRAVEMFTAIGALYLALVIVLSLMTSIVEHKL 221


>gi|16262717|ref|NP_435510.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|14523343|gb|AAK64922.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 228

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP   S++IAL      ++AEIVR G+ A  R Q+EAA +LGL++ +  R V+LP 
Sbjct: 84  GIRLSP-LTSVFIALVLNNGGYVAEIVRGGIEATHRSQVEAAESLGLSYFQTLRYVILPP 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+  +  P+ SQ + L+ ++SL  A+G  DL        ++T + +EI L+   +Y+ L+
Sbjct: 143 ALEKVFTPVVSQCVLLMLSTSLVSAIGVEDLTGAAMIASSETFRTMEIYLVVAMVYVVLN 202

Query: 379 IMIALFMNRLNAKIALKEKK 398
            +    +N     I  + ++
Sbjct: 203 FVFRAVLNVAGLMIFTRSRR 222


>gi|13475816|ref|NP_107386.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026575|dbj|BAB53172.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 230

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 75/122 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   AA+ +EI+R  + AVPRG  EAA A G++     RL++LP A+R+ IP  T++
Sbjct: 102 VALSLNEAAYGSEILRGAIKAVPRGLTEAATASGMSKLLTLRLIVLPLALRNAIPNYTNE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K +SLA  +   ++  +   +I+QT +A+E+ +    IYL+L+  I   +N L  
Sbjct: 162 IILMVKGTSLASIITLMEITGIAQGLISQTYRAVEVFVAAGAIYLTLNFAIISALNALET 221

Query: 391 KI 392
           ++
Sbjct: 222 RL 223


>gi|323490322|ref|ZP_08095537.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
 gi|323395992|gb|EGA88823.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
          Length = 222

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL  +  A+IAEI R  +  V  GQ EA+++LG+  ++  + ++ PQA+R  IPPL +Q
Sbjct: 96  IALGIHNGAYIAEIFRGAIQGVDPGQREASMSLGMNRKQTMQRIVFPQALRRSIPPLGNQ 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMN 386
           ++  LK+SSL   +G +++ ++      Q+ Q  E  L+    YL L    + ++  + N
Sbjct: 156 FIITLKDSSLVYIIGVSEIFALANREAAQSFQPFESFLVVALYYLVLVMIFTYLLRWYEN 215

Query: 387 RLNAKIA 393
           +L+   A
Sbjct: 216 KLDVDKA 222


>gi|313632859|gb|EFR99809.1| amino acid ABC transporter, permease protein [Listeria seeligeri
           FSL N1-067]
          Length = 213

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 74/124 (59%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+    +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAXXXVLFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|311103246|ref|YP_003976099.1| glutamine transport ATP-binding protein GlnQ 1 [Achromobacter
           xylosoxidans A8]
 gi|310757935|gb|ADP13384.1| glutamine transport ATP-binding protein GlnQ 1 [Achromobacter
           xylosoxidans A8]
          Length = 502

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 7/129 (5%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL+   Y L        Q     G+ +S  F +   AL     AFIAEI R G++ 
Sbjct: 67  LPLLVLLVFIYNLP-------QVFPAAGALLSDPFYAGLTALVVSETAFIAEIHRGGILG 119

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPRGQ+EA  ALG+ +    R++++PQA+R  +P L+++++ + K +SL   +  A+++ 
Sbjct: 120 VPRGQIEAGRALGIRYAGIQRMIVIPQALRIALPALSNEFITIAKLTSLVSVISLAEILL 179

Query: 352 VGGTIINQT 360
           VG  +  Q 
Sbjct: 180 VGQRLYTQN 188


>gi|307131970|ref|YP_003883986.1| Octopine transport system permease occM [Dickeya dadantii 3937]
 gi|306529499|gb|ADM99429.1| Octopine transport system permease protein occM [Dickeya dadantii
           3937]
          Length = 238

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF+ +  S   P     F    +AL+  TA + AEI+R  L+++P GQ+EA +A G++
Sbjct: 77  LGQFSVVRDSLFWPVLRDPFSCAVVALALCTAGYTAEILRGALLSIPAGQIEAGLACGMS 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++ P A+R  +P  +++ + L+K+++LA  V   D+  V   II +T + +E+
Sbjct: 137 RWLLLRRIIAPVALRHALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQRTYRTLEV 196

Query: 367 ILIWMFIYLSLSIMI 381
                 IYL L+ +I
Sbjct: 197 FACAALIYLLLNFII 211


>gi|302561351|ref|ZP_07313693.1| ABC transporter permease [Streptomyces griseoflavus Tu4000]
 gi|302478969|gb|EFL42062.1| ABC transporter permease [Streptomyces griseoflavus Tu4000]
          Length = 278

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 5/116 (4%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R+G+ AVP+GQMEAA +LG +  +A   +++PQA R I+PPLT++ + L K+SS
Sbjct: 158 YMAETIRAGIQAVPKGQMEAARSLGFSPARAMVSIIIPQAFRIILPPLTNELVLLFKDSS 217

Query: 340 LAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L + +G      +L   G  + +QT  +   IL+    YL +++ +   + R+ AK
Sbjct: 218 LVLFLGVTLEERELSKYGRDLASQTANSTP-ILVAGLCYLLITVPLGFVVRRMEAK 272


>gi|329297091|ref|ZP_08254427.1| Glutamine ABC transporter, permease subunit [Plautia stali
           symbiont]
          Length = 269

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 79/131 (60%), Gaps = 5/131 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A++ EI RSG+ +V +GQMEA  ALG+++ +A RLV++PQ +R ++P + +Q+
Sbjct: 108 ALSLIASAYMGEIFRSGIQSVEQGQMEACRALGMSYGRAMRLVIIPQGIRRVLPAIVNQF 167

Query: 332 LNLLKNSS----LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + ++K+SS    L +  G  +L  VG      +G    ++L  +F YL +++ +   +N 
Sbjct: 168 IAIIKDSSLVYLLGLMTGQRELFRVGQDADVLSGNLSPLMLAGLF-YLVITVPLTHAVNY 226

Query: 388 LNAKIALKEKK 398
           +N +     ++
Sbjct: 227 INVRYRTGRRR 237


>gi|307133278|ref|YP_003885294.1| ABC transporter permease [Dickeya dadantii 3937]
 gi|306530807|gb|ADN00738.1| ABC transport system, permease component [Dickeya dadantii 3937]
          Length = 252

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 10/184 (5%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A     S + GI  ++  T L        G A  LL +       +P ++
Sbjct: 17  TFPDGPLGGAALTLALSLMAGIASAVLGTGLGVALAMYRGWAGGLLAMVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P+L   +        PE  ++  AL+   +A++A  V++G++A+ RGQ
Sbjct: 77  LI---FWTYFLLPMLFGVDI-------PEITTVVCALAFIASAYLAHGVKAGIVAIGRGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LGL   +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGMSLGLGRWQTLWYIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186

Query: 357 INQT 360
            N++
Sbjct: 187 NNRS 190


>gi|194016790|ref|ZP_03055403.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus ATCC 7061]
 gi|194011396|gb|EDW20965.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus ATCC 7061]
          Length = 218

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 29/164 (17%)

Query: 193 SFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LGI+L+L    + +       F+    +  PL+     + FGLP L    L +Q+  
Sbjct: 32  GFILGILLTLCKISVFKPLIWLADFYTSIFRGTPLVLQLLIIYFGLPQL----LGFQID- 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                             ++ +   A S  +AA+++EI+R+G+ A+ +GQ EAA+ALG+ 
Sbjct: 87  ------------------QYWAAVAAFSLNSAAYVSEIIRAGINAIDKGQKEAAVALGIP 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           + K  + +LLPQA ++I P L ++ + L K S++   +G  D++
Sbjct: 129 YAKMMKDLLLPQAFKNISPALVNETITLTKESAIVTVIGLGDVM 172


>gi|170754694|ref|YP_001780100.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|169119906|gb|ACA43742.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
          Length = 211

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+
Sbjct: 96  GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+L  A+G  D++     ++ +    I    I   IYL ++  + L    L  K A
Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVLMFRTLEKKYA 210


>gi|126435628|ref|YP_001071319.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126235428|gb|ABN98828.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 307

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 71/117 (60%), Gaps = 3/117 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA++AEI+R+G+ +VP GQ EA+ ALG++     R  +LPQAMR IIPP  ++
Sbjct: 159 IGLGLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNE 218

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS--IMIALF 384
            +++LK +SL  AV ++ +L      I     Q I ++++    YL+++  +M+  F
Sbjct: 219 IISMLKTTSLVTAVPYSMELYGRARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQF 275


>gi|209546329|ref|YP_002278219.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539186|gb|ACI59119.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  EI+R G+ ++P+GQMEA +ALGL   +  RL++L  A+R+I P LTSQ
Sbjct: 95  IALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           ++ L   +S+A A+   +L SV   I +++ ++ E+       Y  +S +M+ LF
Sbjct: 155 FVLLTLTTSIASAISAYELTSVSQRIESESFRSFEVYFTVTLFYFVISWVMMRLF 209



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 39/62 (62%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           ++L+G + TF LA  GM+ A +IG    A R SA K + W+   +VE+ RN P LV IFF
Sbjct: 16  SLLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPLRWLVIAFVELIRNTPFLVQIFF 75

Query: 148 LY 149
           +Y
Sbjct: 76  IY 77


>gi|196046952|ref|ZP_03114172.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|229154561|ref|ZP_04282678.1| Amino acid ABC transporter [Bacillus cereus ATCC 4342]
 gi|229183181|ref|ZP_04310411.1| Amino acid ABC transporter [Bacillus cereus BGSC 6E1]
 gi|196022181|gb|EDX60868.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|228600320|gb|EEK57910.1| Amino acid ABC transporter [Bacillus cereus BGSC 6E1]
 gi|228628959|gb|EEK85669.1| Amino acid ABC transporter [Bacillus cereus ATCC 4342]
          Length = 209

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 10  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 64  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 24  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64


>gi|51892199|ref|YP_074890.1| glutamine ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855888|dbj|BAD40046.1| glutamine ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 218

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 73/122 (59%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  + A+IAEI+R+ + ++ RGQMEAA +LG+++  A R ++LPQ  R ++PP+ ++   
Sbjct: 96  SLNSGAYIAEIIRAAIQSIDRGQMEAARSLGMSYGLAMRRIILPQTYRRLLPPMVNELSA 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L K++SLA  +   +L+      +++T  A +  +     YL +++ ++   +RL  K+ 
Sbjct: 156 LTKDTSLASTISILELMKYSSQFVSRTNLAWQTYVWTAAFYLVVTMTLSALASRLEKKLE 215

Query: 394 LK 395
            +
Sbjct: 216 AR 217


>gi|154149257|ref|YP_001406028.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter hominis ATCC BAA-381]
 gi|153805266|gb|ABS52273.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter hominis ATCC BAA-381]
          Length = 235

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 56/78 (71%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   ++A++AEIVRSG+ ++ +GQMEAA A+GL +  + R ++ PQA+++I+P L +++
Sbjct: 112 ALGLNSSAYVAEIVRSGINSIDKGQMEAARAMGLNYTTSMRKIVFPQAIKNILPALANEF 171

Query: 332 LNLLKNSSLAVAVGFADL 349
           ++L K +S+   V   DL
Sbjct: 172 ISLFKETSVVGMVAITDL 189


>gi|16125689|ref|NP_420253.1| cystine ABC transporter permease [Caulobacter crescentus CB15]
 gi|221234444|ref|YP_002516880.1| cystine transport system permease protein [Caulobacter crescentus
           NA1000]
 gi|13422805|gb|AAK23421.1| cystine ABC tranporter, permease protein, putative [Caulobacter
           crescentus CB15]
 gi|220963616|gb|ACL94972.1| cystine transport system permease protein [Caulobacter crescentus
           NA1000]
          Length = 219

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 22/201 (10%)

Query: 195 VLGIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           VLG +L+L   RLSR        G     +Y+S F   G P LV + L Y   +  P   
Sbjct: 35  VLGFLLALM--RLSRSALLRWPAG-----VYVSAF--RGTPLLVQLFLIY---YGLP--- 79

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF         P  ++  I  S   AA+  EI+RS + AV +GQ EAA  LG++  +  R
Sbjct: 80  QFGL-----EMPPLVAAGIGFSLNVAAYSCEILRSAIAAVDKGQWEAASVLGMSRGQTLR 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA R+ + PL++ +++L+K++SLA  +   +L      I  +T +   + L    
Sbjct: 135 RVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITARTYEIFTLYLAAAA 194

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
           IY  LS ++A    RL  + A
Sbjct: 195 IYWILSTILAAAQTRLERRAA 215



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G L+   RLS + L+ W   VYV  FR  P LV +F +
Sbjct: 15  LLKGAGYTIVLSVIGMSIGVVLGFLLALMRLSRSALLRWPAGVYVSAFRGTPLLVQLFLI 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|56962686|ref|YP_174412.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908924|dbj|BAD63451.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 226

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 5/213 (2%)

Query: 182 TMDTNAKIFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           T D    I +F  +L  I +++ AT ++       G  L LL  ++F     P  + +A 
Sbjct: 4   TWDWEFAIAIFPEILSAITVTIAATIIAYCISLTAGLVLTLLRRASFK----PLALTVAG 59

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
             +     P L Q  F+  +T    F +  I L  + A +++EI RSG+ AVP+ Q EA+
Sbjct: 60  MIEFIRATPPLVQLFFVYYTTPLTGFQTGAIVLGLHYATYVSEIYRSGIEAVPKSQWEAS 119

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            AL  T  +  R ++LPQA+  +IP L +  + L K + L  A+   ++++V  +I    
Sbjct: 120 QALNFTRAQTWRRIILPQAIPPVIPMLGNYLIVLFKETPLLSAIFVVEMMAVAQSIGTSD 179

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + +E I I  F++L LS   A+F+  L  K+ 
Sbjct: 180 WRYVEPITIVGFLFLVLSYPSAVFIRYLERKVG 212


>gi|320531680|ref|ZP_08032620.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136100|gb|EFW28108.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 291

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 65/100 (65%), Gaps = 1/100 (1%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +TVS +F  L + +   T+A  AE+ RSG+ A+ RGQ EAA ALG++     RL+L PQA
Sbjct: 153 ATVS-DFWKLALPIVMCTSATTAEVFRSGVRALDRGQTEAAWALGMSSSLTMRLILAPQA 211

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +R ++P L +Q + ++K ++LA  + + +L+  G TII Q
Sbjct: 212 LRLMLPTLVTQLVTIVKGTTLAYVLAYPELMYRGSTIIGQ 251


>gi|315641051|ref|ZP_07896134.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483220|gb|EFU73733.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 488

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 81/123 (65%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+  +AA++AEI+R+G+ AV +GQMEAA +LG+  R+A + ++ PQA+++I+P L ++
Sbjct: 363 IALALNSAAYVAEIIRAGISAVNKGQMEAARSLGMNQRQAMQFIIFPQAIKNILPALGNE 422

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K SS+   +G ++L+   G +   + +     + + LI+  +  S+S ++ +   
Sbjct: 423 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYVIVSLIYFVLTFSMSRLLGVAER 482

Query: 387 RLN 389
           R+N
Sbjct: 483 RMN 485


>gi|222087756|ref|YP_002546293.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725204|gb|ACM28360.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 226

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 13/189 (6%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           T ++R F  K   A+   Y+  ++I G P LV +   + + +  P +G         +  
Sbjct: 41  TAVTRLFGPKPLVAVARFYV--WVIRGTPLLVQL---FVIFYGLPSMG--------ILLD 87

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G+  R+A    +LPQA R  +
Sbjct: 88  AFPAAVIGFTLNVGAYSSEIIRAVISSVPKGQWEAAYSIGMNWRQAMSRTILPQAARVAV 147

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL LS  ++  
Sbjct: 148 PPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATTYEPLILYIEAAIIYLVLSTFLSTL 207

Query: 385 MNRLNAKIA 393
              L  + A
Sbjct: 208 QGYLERRFA 216


>gi|283458861|ref|YP_003363507.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283134922|dbj|BAI65687.1| ABC-type amino acid transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 224

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 4/108 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S +T A++AE  RS + A+PRGQ EAA  L  T  +  R V++PQA+R  +P L + 
Sbjct: 94  ITMSLHTGAYVAETFRSAVAAIPRGQFEAAATLNFTRMQTLRHVVIPQAVRIALPNLGNN 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EIILIWMFIY 374
           +++L+K +SL   +   DL   G  I ++T + +    E+ +I++ I+
Sbjct: 154 FIDLIKGTSLVSVISMVDLFQTGKQIASRTFEPLAMYSEVAIIYLVIF 201


>gi|302549236|ref|ZP_07301578.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
 gi|302466854|gb|EFL29947.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
          Length = 339

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 77/128 (60%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ + AA+ AE+VR G+++V  GQ EAA ALG+   +  R +++PQAMRSI+P   + 
Sbjct: 185 IGLTLHEAAYAAEVVRGGILSVDSGQTEAAQALGIGRARTLRRIVVPQAMRSIVPTAGNM 244

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
            +  LK +S+   +   DL+     + NQT Q I ++++    Y++++ ++++   ++ R
Sbjct: 245 LIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLLVVATLWYIAVTTVLSVGQFYVER 304

Query: 388 LNAKIALK 395
             A+ A +
Sbjct: 305 HYARGAAR 312


>gi|324989769|gb|EGC21712.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
 gi|324992503|gb|EGC24424.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324995967|gb|EGC27878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|325697413|gb|EGD39299.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
 gi|327460727|gb|EGF07062.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327488811|gb|EGF20610.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 230

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P LT+  LNL+++
Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPLQTFLRIVLPQAFRIALPNLTTALLNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E       IY  ++++++L    L   + +K
Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228

Query: 396 EK 397
           E+
Sbjct: 229 ER 230


>gi|152965191|ref|YP_001360975.1| ABC transporter inner membrane protein [Kineococcus radiotolerans
           SRS30216]
 gi|151359708|gb|ABS02711.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 332

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 52/67 (77%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI R+GL++V RGQ EAA ALG++   A R V+LPQAMR I+PP  ++ + +LK+
Sbjct: 192 AAYMAEIARAGLLSVDRGQHEAAEALGMSKGLAMRRVVLPQAMRVIVPPTGNEVIAMLKD 251

Query: 338 SSLAVAV 344
           +SL VA+
Sbjct: 252 TSLLVAI 258


>gi|148926601|ref|ZP_01810283.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845295|gb|EDK22389.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 198

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 50/67 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG++AVPRGQ EA+ + G T+ +  R +++PQ +R I+PP+T+Q
Sbjct: 122 LGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIRIILPPMTNQ 181

Query: 331 YLNLLKN 337
            +NL+K 
Sbjct: 182 MVNLIKK 188



 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A + GF+ T  ++   ++ ATI GT+ G    S  K++    R+YVE+F+N+P ++ IFF
Sbjct: 43  AFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIFF 102

Query: 148 LY 149
           L+
Sbjct: 103 LF 104


>gi|159037031|ref|YP_001536284.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora arenicola CNS-205]
 gi|157915866|gb|ABV97293.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora arenicola CNS-205]
          Length = 235

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 17/187 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLG-QFNFIGGSTVSPEFMSLYIALS 274
           + +PL  +  F  FGLP     AL     F + P L   F+ +G  T  P F    IAL 
Sbjct: 59  RNMPLTIVMFFAAFGLP-----ALGSNADFLRIPGLDIVFSRLG--TDLPYFRFGLIALV 111

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            YTAAF+ E +RSG+ AVP GQ EAA +LGLT  +  R V+LPQ+  + + PL S  + +
Sbjct: 112 LYTAAFVCEALRSGVNAVPAGQAEAARSLGLTFTQNLRHVVLPQSWAASVVPLGSVIIAM 171

Query: 335 LKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLN 389
           +KNS+L   +GF     DL      + +  G+    + I + I YL +++ + + ++R+ 
Sbjct: 172 IKNSAL---IGFFGVVGDLSQTADQLTSAGGEPFIPVAIGISIGYLIMTVPLGVLLDRIE 228

Query: 390 AKIALKE 396
            + A+  
Sbjct: 229 RRQAVAR 235


>gi|226362676|ref|YP_002780454.1| ABC transporter substrate-binding/permease protein [Rhodococcus
           opacus B4]
 gi|226241161|dbj|BAH51509.1| putative ABC transporter substrate-binding/permease protein
           [Rhodococcus opacus B4]
          Length = 603

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 76/117 (64%), Gaps = 5/117 (4%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI RSG+ +V  GQ+EA+ ALG ++RK+  LV++PQ +R ++P L +Q+++L+K+SS
Sbjct: 465 YIGEIFRSGIQSVEPGQLEASRALGFSYRKSMTLVVVPQGVRRVLPALMNQFISLIKDSS 524

Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +G      +L +VG  +  QTG    ++   +F YL+L+I +   +N ++ ++
Sbjct: 525 LIYFLGLLVTQRELFAVGRDLNAQTGNLSPLVAAGLF-YLALTIPLTHLVNYIDNRL 580



 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            G  NT  LA +  I  T++G L+    +S  + + W  RVY +VFR +P +V+I  +
Sbjct: 377 TGLPNTLILALASGIVGTVLGMLLAMAGISRTRWLRWPARVYTDVFRGLPAVVIILIV 434


>gi|15890450|ref|NP_356122.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158680|gb|AAK88907.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 216

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 4/129 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ EI R G+ AVP+GQ EAA ALGL +    + V+LPQA +  +P
Sbjct: 85  WIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAANALGLHYVSRMKDVVLPQAFKISLP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMI 381
                 + L+K +SLA  VGF +L   G  + NQT + + +     +I+  I   LS+  
Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTFRPLTVFAIVGIIYFLICWPLSLWG 204

Query: 382 ALFMNRLNA 390
           A    RL A
Sbjct: 205 AGVEKRLQA 213


>gi|126175590|ref|YP_001051739.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           baltica OS155]
 gi|125998795|gb|ABN62870.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS155]
          Length = 226

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 76/123 (61%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     + ++LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSKAMTMKSIILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +         LI++F+  S + +++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDSVPLFTCALIYLFLTYSFTFVLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|257081536|ref|ZP_05575897.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|256989566|gb|EEU76868.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
          Length = 507

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 36/225 (16%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLY 223
           MFL   GL+     + T     V    LG+++ +F T          F +K G  +  +Y
Sbjct: 277 MFLRGAGLTLFIALIGT-----VVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIY 331

Query: 224 ISTFLIFGLPTLVL-------IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           I  F   G P +V        +AL + +  D+ V                 +L+I +S  
Sbjct: 332 IEVFR--GTPMMVQAMVIFYGLALAFGISLDRTV----------------AALFI-VSVN 372

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K
Sbjct: 373 TGAYMSEIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIK 432

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++++   +G ADL   G        Q  +   I   +YL ++ +I
Sbjct: 433 DTAVLSVIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVI 477


>gi|229056620|ref|ZP_04196026.1| Amino acid ABC transporter [Bacillus cereus AH603]
 gi|228720689|gb|EEL72247.1| Amino acid ABC transporter [Bacillus cereus AH603]
          Length = 225

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 26  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 80  FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 132 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 168



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 34/68 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            +S+A  +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 13  QTSFAPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 72

Query: 142 LVVIFFLY 149
           LV +F ++
Sbjct: 73  LVQLFIIF 80


>gi|327468421|gb|EGF13906.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
 gi|327472448|gb|EGF17879.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 230

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P LT+  LNL+++
Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIVLPQAFRIALPNLTTALLNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E       IY  ++++++L    L   + +K
Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLTVK 228

Query: 396 EK 397
           E+
Sbjct: 229 ER 230


>gi|222085838|ref|YP_002544369.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221723286|gb|ACM26442.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 384

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 58/82 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S +T+A++AE++R GL AVP+GQ E A +LGL + +  RL++LPQA++ +IP + + 
Sbjct: 252 IGVSIFTSAYMAEVIRGGLQAVPKGQFEGADSLGLGYWQKMRLIVLPQAIKLVIPGIVNT 311

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ + K++SL   +   DL+ +
Sbjct: 312 FIGMFKDTSLISIINMFDLLGI 333


>gi|313107729|ref|ZP_07793911.1| hypothetical protein PA39016_001060056 [Pseudomonas aeruginosa
           39016]
 gi|187939706|gb|ACD38848.1| polar amino acid uptake transporter family protein [Pseudomonas
           aeruginosa]
 gi|310880413|gb|EFQ39007.1| hypothetical protein PA39016_001060056 [Pseudomonas aeruginosa
           39016]
          Length = 221

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 4/134 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P ++S+ I+L+ +  A  +E  R  L ++   Q +A +ALGLT R     V+ PQA+   
Sbjct: 87  PPYVSVAISLTLFMTAITSETFRGALKSIAAEQHDACVALGLTMRVKVFYVVFPQALLRA 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSI 379
           +PPL S  ++L K S+L  +VG ADL+ VG  I N T + +E    + +I+  +   L+ 
Sbjct: 147 VPPLLSNLVSLFKESALISSVGVADLMFVGQNISNSTARPVEFLSAVAVIYFLVAFPLTR 206

Query: 380 MIALFMNRLNAKIA 393
           ++ +   R+  + A
Sbjct: 207 LVGVVEARMLRRFA 220


>gi|170016505|ref|YP_001727424.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
 gi|169803362|gb|ACA81980.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
          Length = 219

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 30/165 (18%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           + S + G V+ +       +F +  G      + LPLL I  F+ F LP       K  +
Sbjct: 34  ILSLIFGSVVGIIQFERLPYFSKFVGTINNVIRNLPLLLIIFFVYFALP-------KIGI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H                  P F +  +A+S + +A +AEIVR GL ++  GQ E A A G
Sbjct: 87  HL-----------------PIFWATVVAMSTFESAMLAEIVRGGLESIDIGQFEGARANG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           L++ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  A++
Sbjct: 130 LSNMQTMIYIILPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEM 174


>gi|163793104|ref|ZP_02187080.1| amino acid ABC transporter, permease protein [alpha proteobacterium
           BAL199]
 gi|159181750|gb|EDP66262.1| amino acid ABC transporter, permease protein [alpha proteobacterium
           BAL199]
          Length = 449

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 4/137 (2%)

Query: 261 TVSPEFMSLYIALSC-YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           T++P+ + L I   C + AA++AEIVR GL A+  GQ EAA A+GL + K   L+++PQA
Sbjct: 307 TLNPDKLVLVIVAVCIFAAAYMAEIVRGGLQAINTGQYEAARAVGLNYWKMMTLIVMPQA 366

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFAD---LVSVGGTIINQTGQAIEIILIWMFIYLS 376
           ++ +IP +   ++ LLK+++L   +G  D   +V   G      G   E +L   F++  
Sbjct: 367 LKLMIPNIVGNFIGLLKDTTLVSIIGLYDILLMVRASGQDPKWLGMHTEPMLFAAFVFFV 426

Query: 377 LSIMIALFMNRLNAKIA 393
           +   ++ +   L   I 
Sbjct: 427 ICFAMSKYSQHLERTIG 443


>gi|323485959|ref|ZP_08091291.1| hypothetical protein HMPREF9474_03042 [Clostridium symbiosum
           WAL-14163]
 gi|323693047|ref|ZP_08107267.1| hypothetical protein HMPREF9475_02130 [Clostridium symbiosum
           WAL-14673]
 gi|323400721|gb|EGA93087.1| hypothetical protein HMPREF9474_03042 [Clostridium symbiosum
           WAL-14163]
 gi|323502928|gb|EGB18770.1| hypothetical protein HMPREF9475_02130 [Clostridium symbiosum
           WAL-14673]
          Length = 220

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 4/128 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F  +  AL     A+++EI+R+G+ AV  GQMEAA +LGL   +A + V+LPQA+++I+
Sbjct: 89  KFTCVCTALVLNATAYVSEIIRAGIQAVDPGQMEAARSLGLNTSQAMKKVILPQALKNIL 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIM 380
           P L ++++  +K +SLA      DL++   T+       +E ++I   IY     +LS +
Sbjct: 149 PALGNEFVTDIKETSLASTFFLGDLMTTFRTLNGALYLTLEPLIIVGIIYFLLTFTLSKL 208

Query: 381 IALFMNRL 388
           IA+F  R+
Sbjct: 209 IAVFERRM 216


>gi|317046297|ref|YP_004113945.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316947914|gb|ADU67389.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 509

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 11/156 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + + G P L+ + L Y       VL +F    G   SP F S  +AL     AF AEI+R
Sbjct: 59  YTLRGTPVLLQLILLYN------VLPEF----GLRFSP-FTSALLALMINETAFCAEIIR 107

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G++A  R Q  AA A G +  K    V++PQA+R+I+P + ++ + LLK++SLA  VG 
Sbjct: 108 GGIMATDRDQSMAAQAFGYSRTKEMIHVVIPQALRAILPTMGNETVGLLKSTSLASVVGV 167

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +L   G  I++Q    I +++    IYL LS ++A
Sbjct: 168 NELTMRGQAIVSQNFLFIPVLVASGGIYLILSTLLA 203


>gi|190895142|ref|YP_001985435.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700803|gb|ACE94885.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 24/167 (14%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+   I LK+ + F                     +   AL+  TAA
Sbjct: 68  PFLVQLFFIFFGLPS---IGLKFSVSF---------------------AAIAALTVNTAA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE++R G+  +P GQ+EA  ALGL  R+    ++L  ++R++ P L++Q++ L+  SS
Sbjct: 104 YIAEVLRGGVDGLPYGQIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLTSS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +  ++   +L      I +Q+ ++ E+  +   IYL+LSI I+ F+ 
Sbjct: 164 VVASISAPELTYSAQIIESQSFRSFEVYFVVTGIYLALSICISSFLR 210


>gi|168181318|ref|ZP_02615982.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|237793771|ref|YP_002861323.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182675517|gb|EDT87478.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|229262160|gb|ACQ53193.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Ba4 str. 657]
          Length = 211

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+
Sbjct: 96  GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+L  A+G  D++     ++ +    I    I   IYL ++  + L    L  K A
Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210


>gi|139438499|ref|ZP_01772015.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC
           25986]
 gi|133776038|gb|EBA39858.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC
           25986]
          Length = 682

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 80/128 (62%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++C  +A++AEI R+G+ +VP GQ EAA +LG+T  +    +++PQA+R +IP +TS+
Sbjct: 558 LAINC--SAYLAEIFRAGIESVPHGQAEAAYSLGMTWSQVMSRIVVPQAVRYVIPTMTSE 615

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L K++SL  +VG  +L+     +   TG     I   ++ YL ++I +   + ++  
Sbjct: 616 FVMLYKDTSLLSSVGVMELMLFSKNLTATTGNITPYICAALY-YLVVTIPLIHIVTKVEH 674

Query: 391 KIALKEKK 398
           ++A + K+
Sbjct: 675 RLAERSKR 682


>gi|15967029|ref|NP_387382.1| putative amino-acid transport system permease ABC transporter
           protein [Sinorhizobium meliloti 1021]
 gi|307302495|ref|ZP_07582252.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307316175|ref|ZP_07595619.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15076302|emb|CAC47855.1| Putative amino-acid transport system permease ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306898015|gb|EFN28757.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306903165|gb|EFN33755.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 226

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 76/128 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VPRGQ EAA ++G++  +A R  +LPQA R  +P
Sbjct: 89  FPAALIGFTLNIGAYSSEIIRAVISSVPRGQWEAAYSIGMSWSQAMRRTILPQAGRVAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA A+   +L      I+  + + + + +    IYL +S +++   
Sbjct: 149 PLSNTFISLVKDTSLAAAITVPELFQTAQRIVATSYEPLILYIEAALIYLVMSSVLSALQ 208

Query: 386 NRLNAKIA 393
            +L  + A
Sbjct: 209 GKLEQRFA 216


>gi|218682497|ref|ZP_03530098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 226

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 14/170 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+VL L  T ++R F      A+   Y+  ++I G P LV +   + + +  P 
Sbjct: 28  LLSFAFGLVLGLI-TAIARLFGPAPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A
Sbjct: 82  IG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
               +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T
Sbjct: 134 MSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATT 183


>gi|153827643|ref|ZP_01980310.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|149737881|gb|EDM52786.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
          Length = 223

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 13/170 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALK 241
           + T  ++  +  V  ++L+LF   + R F       L  LYIS F   G P LV L  L 
Sbjct: 19  LGTTLEMASWGLVFALILALFLANI-RVFKVPVLAPLSQLYISFFR--GTPLLVQLFLLY 75

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L    P+L   +          F +  I L+ + AA++AE +R+ +I + R QMEA++
Sbjct: 76  YGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 127 SVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|66043626|ref|YP_233467.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254333|gb|AAY35429.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330971784|gb|EGH71850.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213

Query: 391 KI 392
           ++
Sbjct: 214 RV 215


>gi|320093690|ref|ZP_08025558.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979350|gb|EFW10839.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 312

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 3/99 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F   ++ L     A++AEI+R+GL++V +GQ EAA ALG+      R ++LPQAMR I+P
Sbjct: 150 FWMAFVGLGLNEGAYLAEIMRAGLLSVDKGQWEAATALGMPRSLIFRRIVLPQAMRVIVP 209

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           P+ ++ +++LK +SL  A+ F   ++    +  Q GQA+
Sbjct: 210 PIGNETISMLKTTSLVSAIPFTLELTF---VARQKGQAM 245


>gi|254449741|ref|ZP_05063178.1| ABC transporter permease protein [Octadecabacter antarcticus 238]
 gi|198264147|gb|EDY88417.1| ABC transporter permease protein [Octadecabacter antarcticus 238]
          Length = 221

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 13/178 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +IF   FV G+ L L    L+R+   +  +     +I  F     P LV I   +  +F 
Sbjct: 26  RIFAICFVTGLSLGLMMG-LARYSVRRWLRWPAACFIEFFR--NTPVLVQI---FWFYFA 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+L  F            M+  + ++  +AAF AEI R G+ ++  GQ EA  A+G+ H
Sbjct: 80  FPILAPFEI-------SALMAAALGITLNSAAFSAEIFRGGIQSIDPGQWEAGRAIGMRH 132

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           R+    ++LPQA+R ++P LT++ + + K ++LA A+ +AD++     I +     IE
Sbjct: 133 REIMARIILPQAVRRMLPALTNRGIEIFKMTTLASAIAYADVLHQARLIASVNYNPIE 190



 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 34/71 (47%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + S   Y  A+  G +NT  +     +    +G ++G  R S  + + W    ++E FRN
Sbjct: 7   FGSVWEYRAALWTGLINTVRIFAICFVTGLSLGLMMGLARYSVRRWLRWPAACFIEFFRN 66

Query: 139 IPPLVVIFFLY 149
            P LV IF+ Y
Sbjct: 67  TPVLVQIFWFY 77


>gi|55377276|ref|YP_135126.1| amino acid ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
 gi|55230001|gb|AAV45420.1| amino acid ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
          Length = 325

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 10/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + VFS  LG  L+L    + R +  +  + L L Y  T LI G P   L+A  + L
Sbjct: 110 TTVLLTVFSVCLGFALAL-PLSVVRVYGGRWARWLALSY--TELIRGTP---LLAQLFVL 163

Query: 245 HFDKPVLGQFNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           +F   +      + G  V    +  F    I+ +  +AA+ +E +R+ L +V  GQ+ AA
Sbjct: 164 YFATSLTQVLRGVPGVGVGFIPAQAFWVAVISFTLNSAAYQSEYLRASLDSVDGGQLTAA 223

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+GL+  +  R V++PQ +R  +P  T++ + L+K SSLA  +   +L     T+ N+T
Sbjct: 224 RAIGLSKLEGIRYVVVPQGLRLALPSWTNELVYLIKYSSLASFITVQELYGRTSTLANET 283

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            Q  E+ ++   +YL+L +  +  M+R+ +  A
Sbjct: 284 YQYTELFVLVAILYLALVVSASALMDRVESHTA 316


>gi|283457667|ref|YP_003362252.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283133667|dbj|BAI64432.1| ABC-type amino acid transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 227

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 24/211 (11%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G VL+L       + R     +    +  PL  + T  I G+ T      ++QL F
Sbjct: 34  SFVIGTVLALMRISPVPSLRWVGTAYVHLVRNTPLTILMTLAILGVWT------QFQLSF 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           F+   I LS Y AAFI E +RSG+  VP+GQ EAA A+GL 
Sbjct: 88  SHDFDTNF-----------FVYAVIVLSIYHAAFICEAIRSGVNTVPKGQAEAARAIGLG 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIE 365
                RLV+ PQA+R  I PL +  + L KN+++A     A+   +  ++I       + 
Sbjct: 137 FFDTARLVIFPQALRGSITPLGNTLIALAKNTTVASVASVAEASGMMKSMIEFDANMVLA 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I +I+   ++ + + I +     + K+A+K 
Sbjct: 197 IFMIFAMGFVIIVVPIGVLTTWSSRKLAVKR 227


>gi|255327588|ref|ZP_05368654.1| L-cystine transport system permease protein TcyB [Rothia
           mucilaginosa ATCC 25296]
 gi|255295262|gb|EET74613.1| L-cystine transport system permease protein TcyB [Rothia
           mucilaginosa ATCC 25296]
          Length = 224

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 4/108 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S +T A++AE  RS + A+PRGQ EAA  L  T  +  R V++PQA+R  +P L + 
Sbjct: 94  ITMSLHTGAYVAETFRSAVAAIPRGQFEAAATLNFTRMQTLRHVVIPQAVRIALPNLGNN 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EIILIWMFIY 374
           +++L+K +SL   +   DL   G  I ++T + +    E+ +I++ I+
Sbjct: 154 FIDLIKGTSLVSVISMVDLFQTGKQIASRTFEPLAMYSEVAIIYLVIF 201


>gi|196037333|ref|ZP_03104644.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|196031575|gb|EDX70171.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
          Length = 214

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 15  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 68

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 69  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 121 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 157



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 29  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 69


>gi|296131956|ref|YP_003639203.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola sp. JR]
 gi|296030534|gb|ADG81302.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola potens JR]
          Length = 221

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 58/89 (65%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F++  IA S   AA+ AEI R G++++PRGQ EAA  LG T  +    ++LPQ ++ I+
Sbjct: 91  RFIAAVIAFSLNYAAYFAEIYRGGILSIPRGQYEAAAVLGFTRTQTFVRIILPQVIKRIL 150

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           PP++++ + L+K+++L   +G ++L  V 
Sbjct: 151 PPVSNEVITLVKDTALVTVLGISELFRVA 179


>gi|258540995|ref|YP_003175494.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|257152671|emb|CAR91643.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 482

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 109/205 (53%), Gaps = 26/205 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  ++G +L+L   +LSR++     K +  +YI    I G P LV     + + F   +
Sbjct: 298 LFGTIIGTLLALM--KLSRNW---LAKVVANIYIE--FIRGTPLLVQ---AFIVFFGTQI 347

Query: 251 LGQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           LG     F+ G+          IA++  + A++AEI+R G+ +VP GQ EAA +LGL   
Sbjct: 348 LGLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPVGQTEAARSLGLHQS 397

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----I 364
           +A R V+LPQAM++I P L ++++  +K SS+   +G  +L+  G  +   + +     +
Sbjct: 398 QAMRYVILPQAMKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLV 457

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
            + +++  +  +LS ++ L   R N
Sbjct: 458 VVAILYFLMTFTLSRLLRLIEKRFN 482


>gi|218674961|ref|ZP_03524630.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli GR56]
          Length = 219

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 65/115 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL  +TAAF+AEI R  + +V RGQ EA+ +L +   +  R V+LPQA+R  
Sbjct: 84  PAWLAAGLALILWTAAFLAEIWRGCVESVARGQWEASASLAMGRLQQMRYVILPQALRVA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           IPP     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L 
Sbjct: 144 IPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 198


>gi|114321289|ref|YP_742972.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227683|gb|ABI57482.1| L-glutamine ABC transporter membrane protein [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 218

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 74/127 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+    A+I EIV   ++++ +GQ +A +ALGL++ +    ++ P A R  IP
Sbjct: 89  FAAASICLAMNAGAYITEIVCGAVLSIDKGQTDAGLALGLSYPQVMLHIVGPLAFRRSIP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +Q++  LK+S+L + +G A+L   G  +  QTG+A+EI       YL ++  +A+ M
Sbjct: 149 PLGNQFIISLKDSALFLVIGVAELAQRGEQLTAQTGRALEIWTAVAVFYLIMTFTLAMIM 208

Query: 386 NRLNAKI 392
             +  ++
Sbjct: 209 RAIEQRM 215


>gi|307132728|ref|YP_003884744.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306530257|gb|ADN00188.1| Amino acid ABC transporter, permease protein [Dickeya dadantii
           3937]
          Length = 312

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   +A+ AEI+R G++ V  GQ EAA ALGL   + T  ++LPQA+RSI+P   ++
Sbjct: 166 LGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQALRSILPTGFNE 225

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNR 387
            ++L K +S+   +   +L      I N+T Q I +++   +W  +  S+  ++  F+ R
Sbjct: 226 IISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATVWYLVITSVLSVLQYFVER 285

Query: 388 LNAKIALKE 396
             A+ A++E
Sbjct: 286 YVARGAVRE 294


>gi|302517800|ref|ZP_07270142.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|318061024|ref|ZP_07979745.1| transporter transmembrane component [Streptomyces sp. SA3_actG]
 gi|302426695|gb|EFK98510.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 340

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 4/129 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS   AA+ AE+VR+GL++V +GQ EAA ALGL  R     ++LPQA+R+I+P   +Q
Sbjct: 185 IGLSLNEAAYAAEVVRAGLLSVDQGQHEAAAALGLPRRFQFLRIVLPQALRAIVPGYVNQ 244

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L+K++SL   V   DL     S+G T        + +  +W  +  SL  +   ++ 
Sbjct: 245 LIGLVKSTSLVFYVSLLDLFGSVQSLGSTYPGDIVPLLLVATVWYVLLTSLVSIAQFYVE 304

Query: 387 RLNAKIALK 395
           R +++ AL+
Sbjct: 305 RRSSRGALR 313


>gi|209547001|ref|YP_002278919.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538245|gb|ACI58179.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 325

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + AA++AE VRSGL AVPRGQ EAA +LG+++   +  ++LPQA+R + P L   
Sbjct: 196 IGYTVFNAAYVAEFVRSGLQAVPRGQREAAQSLGMSNWTVSTDIVLPQAIRFVQPALVGN 255

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEIILIWMF-IYLSLSIMIALFMNR 387
            L++   ++L   +G  D +  G  I+    +  A++ + ++MF +Y  +   I     R
Sbjct: 256 VLDVFNGATLVFIIGLTDFLRAGQMILADPSSSSAVQEVYVFMFAVYFLIGSAITFGARR 315

Query: 388 LNAKI 392
           + A++
Sbjct: 316 MEARM 320


>gi|69248235|ref|ZP_00604685.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|257880069|ref|ZP_05659722.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257891160|ref|ZP_05670813.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257893974|ref|ZP_05673627.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|258614597|ref|ZP_05712367.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           DO]
 gi|260560318|ref|ZP_05832494.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261208255|ref|ZP_05922928.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289565943|ref|ZP_06446382.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|293553343|ref|ZP_06673979.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           E1039]
 gi|293563074|ref|ZP_06677540.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1162]
 gi|293567501|ref|ZP_06678846.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1071]
 gi|294616566|ref|ZP_06696343.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1636]
 gi|294618840|ref|ZP_06698361.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1679]
 gi|68194486|gb|EAN08984.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|257814297|gb|EEV43055.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257827520|gb|EEV54146.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257830353|gb|EEV56960.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260073663|gb|EEW61989.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260077512|gb|EEW65230.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289162227|gb|EFD10088.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|291589744|gb|EFF21547.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1071]
 gi|291590576|gb|EFF22308.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1636]
 gi|291594915|gb|EFF26271.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1679]
 gi|291602567|gb|EFF32783.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           E1039]
 gi|291604988|gb|EFF34456.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1162]
          Length = 213

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 41/221 (18%)

Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231
           T  K+F+F+ +    LGIVL+L    LS HF         +    +  PLL    F+ +G
Sbjct: 17  TTLKLFLFTLIGSLPLGIVLAL---GLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFIFYG 73

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LPT+ ++       FD+                 F +  IA     AA+ AEI R G+ +
Sbjct: 74  LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 109

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +G  D++ 
Sbjct: 110 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 169

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G   + +    + ++ + + IYL+L+ ++ + M ++  K+
Sbjct: 170 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 209


>gi|310819142|ref|YP_003951500.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392214|gb|ADO69673.1| Glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 469

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 5/125 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+IAEI R+ + ++ +GQMEAA ALG++H  A R V+LPQ  R +IPPL ++
Sbjct: 344 IALSLNAAAYIAEIFRAAIESIDKGQMEAARALGMSHELAMRRVILPQTFRRLIPPLVNE 403

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
              L K++SL + +   +++     + GT +     A   I  ++ I  +LS +      
Sbjct: 404 LAALSKDTSLVMVIALPEMLYETKQLAGTYLRPEVYAWAAI-GYLLIVAALSALAQRLER 462

Query: 387 RLNAK 391
           RL A+
Sbjct: 463 RLEAR 467


>gi|182678575|ref|YP_001832721.1| polar amino acid ABC transporter, inner membrane subunit
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634458|gb|ACB95232.1| polar amino acid ABC transporter, inner membrane subunit
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 385

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 54/78 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE+VR GL AVP+GQ E A ALGL   K  +LV+LPQA+  +IP + + 
Sbjct: 253 IGVALFASAYMAEVVRGGLQAVPKGQFEGAAALGLPPWKTLQLVVLPQALAHVIPGIVNT 312

Query: 331 YLNLLKNSSLAVAVGFAD 348
           ++ L K+++L  AVG  D
Sbjct: 313 FIGLFKDTTLVAAVGIFD 330


>gi|25011698|ref|NP_736093.1| hypothetical protein gbs1658 [Streptococcus agalactiae NEM316]
 gi|24413238|emb|CAD47317.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 221

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 20/201 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F+LG ++  F   L +  H +  + L  ++IS  L+ G+P +VL+ L Y   F  P +G
Sbjct: 34  GFILGAIVGFFVA-LMKMSHLRLLRYLANIHIS--LMRGIPLMVLLFLIY---FGLPFIG 87

Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            Q + +  S V    MS         +A+I+EI+R+ L+AV  GQ EAA ALGL      
Sbjct: 88  IQLDAVTASIVGFTMMS---------SAYISEIIRAALLAVDHGQWEAARALGLKTPTIY 138

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEII 367
           R +++PQA R  +P L++  L+++K SSL   +   D+ +    VGGT  +     I + 
Sbjct: 139 RGIIIPQATRIALPSLSNVLLDMVKGSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVA 198

Query: 368 LIWMFIYLSLSIMIALFMNRL 388
           LI+  I    +I+   +  RL
Sbjct: 199 LIYWVICTLYAIIQDWWEKRL 219


>gi|77405794|ref|ZP_00782878.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77408475|ref|ZP_00785213.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77411932|ref|ZP_00788263.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77162029|gb|EAO73009.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77172917|gb|EAO76048.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77175581|gb|EAO78366.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|319745516|gb|EFV97818.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 221

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 20/201 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F+LG ++  F   L +  H +  + L  ++IS  L+ G+P +VL+ L Y   F  P +G
Sbjct: 34  GFILGAIVGFFVA-LMKMSHFRLLRYLANIHIS--LMRGIPLMVLLFLIY---FGLPFIG 87

Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            Q + +  S V    MS         +A+I+EI+R+ L+AV  GQ EAA ALGL      
Sbjct: 88  IQLDAVTASIVGFTMMS---------SAYISEIIRAALLAVDHGQWEAARALGLKTPTIY 138

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEII 367
           R +++PQA R  +P L++  L+++K SSL   +   D+ +    VGGT  +     I + 
Sbjct: 139 RGIIIPQATRIALPSLSNVLLDMVKGSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVA 198

Query: 368 LIWMFIYLSLSIMIALFMNRL 388
           LI+  I    +I+   +  RL
Sbjct: 199 LIYWVICTLYAIIQDWWEKRL 219


>gi|23098460|ref|NP_691926.1| glutamine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776686|dbj|BAC12961.1| glutamine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 224

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 73/117 (62%), Gaps = 4/117 (3%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAE+VR  + ++ +GQ+EA  +LGLT  +  R ++ PQA + +IPPL +Q++  +K
Sbjct: 107 SGAYIAEVVRGSVDSIDKGQIEAGRSLGLTKNQTMRYIIWPQAFKRMIPPLGNQFIISIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMNRLN 389
           ++SL   +   +L+  G  I++    A+EI     L ++ I L+LS+++ L   RLN
Sbjct: 167 DTSLLSVILVPELMFQGRLIVSNQFIAVEIYTAVALFYLAITLTLSLILRLIERRLN 223



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 29/52 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           G   T  ++  G++   ++G + G GR+S NK +  +  +YVEV R  P LV
Sbjct: 25  GLYYTLLISIVGLLIGFVLGAIFGLGRISKNKFLFVLASIYVEVVRGTPVLV 76


>gi|312196941|ref|YP_004017002.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311228277|gb|ADP81132.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 350

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 18/226 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-- 238
           +T+   A   VF  + GIVL+L   RLS +      K++  LYI  +L   +P +V++  
Sbjct: 105 ITLQVTAYSAVFGLLGGIVLAL--GRLSSN---PVLKSVSWLYI--WLFRSVPLIVVLIF 157

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                AL   +    P   +F     + +  E     I +S   AA+ AE+VR+GL++V 
Sbjct: 158 LYNFGALYRTVSLGVPFGPRFLSFHEADLLGEMAIAVIGVSLNEAAYAAEVVRAGLLSVD 217

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA ALGL      R ++LPQA+R+IIP   +Q + L+K +SL   V   D+    
Sbjct: 218 QGQHEAAAALGLPRFYQFRRIVLPQALRAIIPSYVNQLIGLIKGTSLVFYVSLLDIFGKV 277

Query: 354 GTIINQ-TGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIALK 395
            T+ +   G  I ++L+   W  I  S+  ++  ++ R  ++ AL+
Sbjct: 278 QTMGSTYPGDVIPLLLVGTAWYVILTSIVSVVQYYVERYYSRGALR 323


>gi|257125595|ref|YP_003163709.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049534|gb|ACV38718.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 245

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 66/94 (70%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   +AA++ E VRSG+ ++ +GQMEAA A G+ +R A   +++PQA+++I+P L ++
Sbjct: 121 IALGMNSAAYVEETVRSGIESIDKGQMEAARATGMPYRMAMNEIIMPQAVKNILPALVNE 180

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++NL K +S+   VG+  +V +  T+ +++ QA+
Sbjct: 181 FINLFKETSI---VGYISVVDI--TMNSKSLQAV 209


>gi|199597667|ref|ZP_03211095.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|229551247|ref|ZP_04439972.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258509811|ref|YP_003172562.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|199591474|gb|EDY99552.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|229315410|gb|EEN81383.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257149738|emb|CAR88711.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259651074|dbj|BAI43236.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 482

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 109/205 (53%), Gaps = 26/205 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  ++G +L+L   +LSR++     K +  +YI    I G P LV     + + F   +
Sbjct: 298 LFGTIIGTLLALM--KLSRNW---LAKVVANIYIE--FIRGTPLLVQ---AFIVFFGTQI 347

Query: 251 LGQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           LG     F+ G+          IA++  + A++AEI+R G+ +VP GQ EAA +LGL   
Sbjct: 348 LGLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPVGQTEAARSLGLHQS 397

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----I 364
           +A R V+LPQAM++I P L ++++  +K SS+   +G  +L+  G  +   + +     +
Sbjct: 398 QAMRYVILPQAMKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLV 457

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
            + +++  +  +LS ++ L   R N
Sbjct: 458 VVAILYFIMTFTLSRLLRLIEKRFN 482


>gi|56413133|ref|YP_150208.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362059|ref|YP_002141696.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56127390|gb|AAV76896.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093536|emb|CAR58998.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 75/128 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ 
Sbjct: 93  IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   N    
Sbjct: 153 FISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEN 212

Query: 391 KIALKEKK 398
           ++  +E++
Sbjct: 213 QLNRQERE 220


>gi|119387801|ref|YP_918835.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378376|gb|ABL73139.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 79/139 (56%), Gaps = 7/139 (5%)

Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           + P L Q  FI       G ++SP   +L +AL     A+  EI+R+G+ ++PRGQ+EA 
Sbjct: 65  NTPFLVQIFFIFFGLPAAGISMSPNTAAL-VALVVNVGAYGTEIIRTGIESIPRGQIEAG 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL+  +  R V++  A+R+I P LTSQ++ L+  SS+   +   DL S G  +  +T
Sbjct: 124 RALGLSPVQIFRHVVMIPALRNIYPSLTSQFIYLMLTSSVVSIISANDLASAGADLNART 183

Query: 361 GQAIEIILIWMFIYLSLSI 379
             + EI L+   +Y  L++
Sbjct: 184 FASFEIYLVLTILYFLLAL 202



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 29/54 (53%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  L+   M+   I+  L    + S  + + W+  VYVEV RN P LV IFF++
Sbjct: 23  TVRLSLMAMVLGLIVSVLGAVAKTSGIRPLRWLTDVYVEVIRNTPFLVQIFFIF 76


>gi|326388276|ref|ZP_08209879.1| octopine ABC transporter, permease protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207442|gb|EGD58256.1| octopine ABC transporter, permease protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 241

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 73/128 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +A+   +AA+ AE+ R GL+AVP+GQ+EAA+A G+      R ++LPQ +  +
Sbjct: 106 PAFLTGSLAIGLVSAAYQAEVFRGGLLAVPKGQVEAALAAGMGPWLRFRRIVLPQVLHHV 165

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL + +   LK+S+L    G A+L+ V       T +        M +YL+L+ + + 
Sbjct: 166 LPPLGNVWQFNLKDSALVAITGLAELMRVSLVAAGSTRRPFLFFAAAMVLYLALTSLSSA 225

Query: 384 FMNRLNAK 391
              R+ A+
Sbjct: 226 VFRRIEAR 233


>gi|317053674|ref|YP_004118808.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952779|gb|ADU72252.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 267

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 76/122 (62%), Gaps = 5/122 (4%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A++ EI R+G+ +V RGQMEA  ALG+++ +A RLV++PQ +R ++P + +Q+
Sbjct: 107 ALSLIASAYMGEIFRAGIQSVERGQMEACRALGMSYSRAMRLVVIPQGIRRVLPAIVNQF 166

Query: 332 LNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + ++K+SSL   +G      +L  VG      TG    ++L  +F YL +++ +   +N 
Sbjct: 167 IAIIKDSSLVYLLGLMTNQRELFRVGQDAAVLTGNLSPLMLAGLF-YLIITVPLTHMVNY 225

Query: 388 LN 389
           ++
Sbjct: 226 VD 227


>gi|212697319|ref|ZP_03305447.1| hypothetical protein ANHYDRO_01887 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325848996|ref|ZP_08170506.1| putative arginine ABC transporter, permease protein ArtQ
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212675768|gb|EEB35375.1| hypothetical protein ANHYDRO_01887 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325480640|gb|EGC83702.1| putative arginine ABC transporter, permease protein ArtQ
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 235

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 84/140 (60%), Gaps = 1/140 (0%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           +N I  +T S  F+   +  +  ++A+++E+ R G+ +V +G++EAA +LGL++ K  +L
Sbjct: 95  YNVILANTDSL-FLVAVVTFTINSSAYMSEVFRGGINSVDKGEIEAARSLGLSYEKTAKL 153

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQAM++ +P L ++ + L K +S++  +G  DL    G II++T  A    L    I
Sbjct: 154 VVIPQAMKNSLPALGNEVITLFKETSISGFIGLVDLTRGAGIIISRTFSAAIPYLAAALI 213

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           YL + +++     +L  ++A
Sbjct: 214 YLLVVLLLEKIFKKLEERMA 233


>gi|311279132|ref|YP_003941363.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308748327|gb|ADO48079.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 97/186 (52%), Gaps = 10/186 (5%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIA 272
           +    LP+ +++ F I       LIA  + +++  P  G + + I  +          I 
Sbjct: 44  RMSPVLPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAM---------IG 94

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ ++
Sbjct: 95  LSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFI 154

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   N    ++
Sbjct: 155 SLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQL 214

Query: 393 ALKEKK 398
             +E++
Sbjct: 215 NRQERE 220


>gi|330886120|gb|EGH20021.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 200

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 72  IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 131

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 132 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 191

Query: 391 KI 392
           ++
Sbjct: 192 RV 193



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           RLS  KLV WI R+YV  FR  P LV +F +Y
Sbjct: 23  RLSRLKLVNWIARIYVSFFRGTPLLVQLFVIY 54


>gi|301067874|ref|YP_003789897.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|300440281|gb|ADK20047.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
          Length = 487

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 333 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 369

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 370 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 429

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 430 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 463


>gi|289674586|ref|ZP_06495476.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
 gi|302186281|ref|ZP_07262954.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|330938697|gb|EGH42255.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330951253|gb|EGH51513.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213

Query: 391 KI 392
           ++
Sbjct: 214 RV 215


>gi|229016185|ref|ZP_04173137.1| Amino acid ABC transporter [Bacillus cereus AH1273]
 gi|229022421|ref|ZP_04178959.1| Amino acid ABC transporter [Bacillus cereus AH1272]
 gi|228738902|gb|EEL89360.1| Amino acid ABC transporter [Bacillus cereus AH1272]
 gi|228745139|gb|EEL95189.1| Amino acid ABC transporter [Bacillus cereus AH1273]
          Length = 225

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 26  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 80  FYGLPTLN-------IEVEP-YTAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 132 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 168



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 34/68 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            +S+A  +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 13  QTSFAPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 72

Query: 142 LVVIFFLY 149
           LV +F ++
Sbjct: 73  LVQLFIIF 80


>gi|71738018|ref|YP_272644.1| cystine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558571|gb|AAZ37782.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|320322115|gb|EFW78211.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213

Query: 391 KI 392
           ++
Sbjct: 214 RV 215



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           RLS  KLV WI R+YV  FR  P LV +F +Y
Sbjct: 45  RLSRLKLVNWIARIYVSFFRGTPLLVQLFVIY 76


>gi|260771045|ref|ZP_05879973.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260613934|gb|EEX39125.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|315178628|gb|ADT85542.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 223

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 96/169 (56%), Gaps = 11/169 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           + T  ++ V+     ++LS+    + R F      AL  LYIS F   G P LV + L  
Sbjct: 19  LSTTMEMAVWGMFFALILSVLLANI-RVFKVPVLNALSQLYISFFR--GTPLLVQMFL-- 73

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L++  P +  F  + G      F +  I L+ + AA++AE +R+ +I + R QMEA+++
Sbjct: 74  -LYYGLPQI--FPLLIGIDA---FSAAVIGLTLHFAAYMAETIRAAIIGIDRSQMEASLS 127

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +G+T  +A R ++LPQA R  +P L + +++++K++SLA   G A++++
Sbjct: 128 VGMTTGQAMRRIILPQASRVALPSLMNYFIDMIKSTSLAFTFGVAEIMA 176


>gi|237731334|ref|ZP_04561815.1| binding-protein-dependent transport system inner membrane component
           [Citrobacter sp. 30_2]
 gi|226906873|gb|EEH92791.1| binding-protein-dependent transport system inner membrane component
           [Citrobacter sp. 30_2]
          Length = 225

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 17/160 (10%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIVL+  A R               L+I    I G+P   LI + + + +  P+L   + 
Sbjct: 46  GIVLACCAWRFPGAVRNG-------LFIWAEFIRGIP---LIFVIFWMWYLLPMLTGSDL 95

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G  TV+       +AL+ +TAA +   V +G+ A+P GQ EAAI  G    +A  L+LL
Sbjct: 96  PGAVTVT-------LALAWFTAASVMHSVYAGISALPGGQYEAAIVQGFRPEQALWLILL 148

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           PQ +R+++P LT  ++ LLK++SLA  V   +L +V G +
Sbjct: 149 PQVLRNVLPSLTGIFIGLLKDTSLAFIVNVPELTTVAGQV 188


>gi|154487061|ref|ZP_02028468.1| hypothetical protein BIFADO_00899 [Bifidobacterium adolescentis
           L2-32]
 gi|154084924|gb|EDN83969.1| hypothetical protein BIFADO_00899 [Bifidobacterium adolescentis
           L2-32]
          Length = 225

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R     + +  K LPL  I  F++ G             
Sbjct: 29  LFSTILGVILVMMRISPIASLRTVSGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q  F    T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EAA AL
Sbjct: 76  -----AYAQLKFSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEAARAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361
           GL   +A   ++LPQA R  + PL +  + LLKNS++A A   A   S  +   I     
Sbjct: 131 GLNFMQAATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSTMMSEMIEYHAD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           Q + I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 191 QIVLIFLIFAFGYVVLIIPIGMLTTYLSNKLAVRR 225


>gi|257481899|ref|ZP_05635940.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289624705|ref|ZP_06457659.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289650261|ref|ZP_06481604.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298485134|ref|ZP_07003230.1| Putative transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298160386|gb|EFI01411.1| Putative transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|330865666|gb|EGH00375.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330984783|gb|EGH82886.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009532|gb|EGH89588.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213

Query: 391 KI 392
           ++
Sbjct: 214 RV 215



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           RLS  KLV WI R+YV  FR  P LV +F +Y
Sbjct: 45  RLSRLKLVNWIARIYVSFFRGTPLLVQLFVIY 76


>gi|229074557|ref|ZP_04207586.1| Amino acid ABC transporter [Bacillus cereus Rock4-18]
 gi|229095491|ref|ZP_04226482.1| Amino acid ABC transporter [Bacillus cereus Rock3-29]
 gi|229101615|ref|ZP_04232338.1| Amino acid ABC transporter [Bacillus cereus Rock3-28]
 gi|229114443|ref|ZP_04243861.1| Amino acid ABC transporter [Bacillus cereus Rock1-3]
 gi|229159927|ref|ZP_04287934.1| Amino acid ABC transporter [Bacillus cereus R309803]
 gi|228623666|gb|EEK80485.1| Amino acid ABC transporter [Bacillus cereus R309803]
 gi|228669122|gb|EEL24546.1| Amino acid ABC transporter [Bacillus cereus Rock1-3]
 gi|228681857|gb|EEL36011.1| Amino acid ABC transporter [Bacillus cereus Rock3-28]
 gi|228688037|gb|EEL41924.1| Amino acid ABC transporter [Bacillus cereus Rock3-29]
 gi|228708677|gb|EEL60821.1| Amino acid ABC transporter [Bacillus cereus Rock4-18]
          Length = 207

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 8   TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 62  FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 22  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62


>gi|158425754|ref|YP_001527046.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332643|dbj|BAF90128.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 219

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 18/188 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FV   ++G+ +    T  SR           +LYI   LI G P L+ + L +   F   
Sbjct: 28  FVGGGIVGLAILFLRTGRSRGLRRAA-----MLYIE--LIQGTPLLMQLFLSF---FGLS 77

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +LG F+        P + +  ++L+ +T+AF+AEI R  + +VPRGQ EA+ +L +T+ +
Sbjct: 78  LLG-FDV-------PPWFAAGLSLTLWTSAFLAEIWRGCVESVPRGQWEASASLAMTYFE 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA+R  +PP     + ++K ++L   +GF +L      I N T Q   +  +
Sbjct: 130 QMRHVVLPQALRIAVPPTVGFSVQVVKGTALTSIIGFVELSKASTMITNATFQPFVVYGL 189

Query: 370 WMFIYLSL 377
              IY +L
Sbjct: 190 AALIYFAL 197


>gi|331701148|ref|YP_004398107.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329128491|gb|AEB73044.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 715

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 23/159 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL ++ F+  G+P+L                       G  + P F++  + L+  
Sbjct: 561 RGMPLLVLALFIYTGIPSLT----------------------GQKI-PAFVAGVVTLTFN 597

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IA  V+ G+ AV  GQMEA+ +LGL   KA R V+LPQ +R ++P   +Q++  LK
Sbjct: 598 EGAYIAAFVKGGIQAVDPGQMEASRSLGLPFGKAMRKVILPQGIRIMVPSFINQFIITLK 657

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++S+   +G  +L   G  II +  +  ++  I   IYL
Sbjct: 658 DTSILSIIGLLELTQTGKIIIARNLEGFKVWTIVAAIYL 696


>gi|258541040|ref|YP_003175539.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152716|emb|CAR91688.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 484

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 330 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 366

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 367 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 426

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 427 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 460


>gi|229551205|ref|ZP_04439930.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315497|gb|EEN81470.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 488

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 334 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 370

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 371 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 430

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 431 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 464


>gi|116255278|ref|YP_771111.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259926|emb|CAK03020.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 213

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 71/133 (53%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            ++++ I L+ + +A++ EI R  + AVPRGQ EAA AL L +    + V+LPQA+R  +
Sbjct: 81  SWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYISRMKDVILPQALRISL 140

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P      + L+K +SLA  VGF +L   G  I NQ  Q + +  I   +Y  +   + + 
Sbjct: 141 PATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGIVGILYFLMCCPLTIL 200

Query: 385 MNRLNAKIALKEK 397
             RL  K A   +
Sbjct: 201 GARLERKFAASAR 213


>gi|56964695|ref|YP_176426.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56910938|dbj|BAD65465.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 221

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 14/218 (6%)

Query: 182 TMDTNAKIFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           + D N  I  F F+L G+  +LF   +S       G  L L  +S      +P ++ I+ 
Sbjct: 3   SFDLNLAIESFPFILKGLQYTLFVAVISMAIALVFGFILALGRMSKQAYVRIPCMLFIS- 61

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEF-------MSLYIALSCYTAAFIAEIVRSGLIAVP 293
                F++ V             PEF        +  +  S  T+A++AE+ RS L AV 
Sbjct: 62  -----FNRGVPILLLLFLLYAALPEFGFQLSAVAAAIVGFSLNTSAYVAEVNRSALAAVD 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA +LGL+  KA + ++LPQA+R  +PPL++ +L+L+K +S+A  +   +L+   
Sbjct: 117 RGQHEAAASLGLSKTKAMQHIILPQAVRIALPPLSNIFLSLVKMTSIASTIALPELMYQA 176

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +  +      ++++   IY  +  +++L    L  +
Sbjct: 177 RIVGGREFNYFTVLIVAALIYWGICSLLSLLQRYLEKR 214


>gi|298487228|ref|ZP_07005277.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298158252|gb|EFH99323.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 220

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 72/129 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+P GQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L  
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLG 210

Query: 386 NRLNAKIAL 394
            ++  ++ L
Sbjct: 211 RQIEKRVVL 219


>gi|260598413|ref|YP_003210984.1| amino acid ABC transporter permease [Cronobacter turicensis z3032]
 gi|260217590|emb|CBA31845.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Cronobacter turicensis z3032]
          Length = 231

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG +L++   RLS  +        P+ +++ F I       LIA  + +++  P  
Sbjct: 41  FGLVLGFLLAMM--RLSPFW--------PVSWLARFYISVFRGTPLIAQLFMIYYGLP-- 88

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 89  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 142

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL + +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 143 RRAILPQAARVALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 202

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 203 LIYWVMATVLSALQNHFENQLNRQERD 229



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G L+   RLS    V+W+ R Y+ VFR  P +  +F +
Sbjct: 24  LLKGAVFTLQLSIGGMFFGLVLGFLLAMMRLSPFWPVSWLARFYISVFRGTPLIAQLFMI 83

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 84  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 116


>gi|229010279|ref|ZP_04167488.1| Amino acid ABC transporter [Bacillus mycoides DSM 2048]
 gi|229131789|ref|ZP_04260663.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST196]
 gi|229165791|ref|ZP_04293559.1| Amino acid ABC transporter [Bacillus cereus AH621]
 gi|228617792|gb|EEK74849.1| Amino acid ABC transporter [Bacillus cereus AH621]
 gi|228651683|gb|EEL07646.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST196]
 gi|228750974|gb|EEM00791.1| Amino acid ABC transporter [Bacillus mycoides DSM 2048]
          Length = 207

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 8   TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 62  FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 22  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62


>gi|111020458|ref|YP_703430.1| amino acid ABC transporter permease [Rhodococcus jostii RHA1]
 gi|110819988|gb|ABG95272.1| probable ABC amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
          Length = 603

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 76/117 (64%), Gaps = 5/117 (4%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI RSG+ +V  GQ+EA+ ALG ++RK+  LV++PQ +R ++P L +Q+++L+K+SS
Sbjct: 465 YIGEIFRSGIQSVEPGQLEASRALGFSYRKSMTLVVVPQGVRRVLPALMNQFISLIKDSS 524

Query: 340 ----LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               L + V   +L +VG  +  QTG    ++   +F YL+++I +   +N ++ ++
Sbjct: 525 LIYFLGLLVSQRELFAVGRDLNAQTGNLSPLVAAGLF-YLAMTIPLTHLVNYIDNRL 580



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 32/58 (55%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            G  NT  LA +  I  T++G L+    +S  + + W  R+Y +VFR +P +V+I  +
Sbjct: 377 TGLPNTLILALASGIVGTVLGMLLAMAGISRTRWLRWPARIYTDVFRGLPAVVIILIV 434


>gi|325848662|ref|ZP_08170240.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480664|gb|EGC83724.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 529

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 4/129 (3%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++ +I +S  T A++AE+VR G+ +V  GQ EA  ALG+TH +    V++PQ ++SI+P 
Sbjct: 388 LAAFIIVSINTGAYLAEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPA 447

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIA 382
           + ++++  +K++S+   +   +L  V  +I   T Q  +  LI   IY  L+     +I 
Sbjct: 448 IANEFVVNIKDTSVLNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFVTTRIIL 507

Query: 383 LFMNRLNAK 391
           L   RLN K
Sbjct: 508 LLERRLNNK 516


>gi|302388264|ref|YP_003824086.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302198892|gb|ADL06463.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 244

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 59/87 (67%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F+   I +  Y  A+I+E++R+G+ A+P+GQ EAA + G ++ +    ++LPQ ++ I
Sbjct: 97  PKFVLGVIGVGVYHGAYISEVIRTGIEAIPKGQSEAASSQGFSYLETMYHIILPQTIKII 156

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +PPL +Q LNL+KN+S+   V   DL+
Sbjct: 157 MPPLANQALNLVKNTSILAMVAGMDLM 183


>gi|239630723|ref|ZP_04673754.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239527006|gb|EEQ66007.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 484

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 330 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 366

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 367 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 426

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 427 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 460


>gi|116496267|ref|YP_808001.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|116106417|gb|ABJ71559.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
          Length = 484

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 330 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 366

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 367 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 426

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 427 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 460


>gi|86147679|ref|ZP_01065987.1| arginine ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218709552|ref|YP_002417173.1| arginine transporter permease subunit ArtQ [Vibrio splendidus
           LGP32]
 gi|85834460|gb|EAQ52610.1| arginine ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218322571|emb|CAV18730.1| ABC transporter: transmembrane protein; Arginine uptake [Vibrio
           splendidus LGP32]
          Length = 228

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV +GQ EAA ALG++  +A   V+LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGISQSRAFFRVVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLIT 205

Query: 382 ALFMNRLNAKIALK 395
              +  ++ K +++
Sbjct: 206 QRLVKVIDGKFSIQ 219


>gi|47092916|ref|ZP_00230698.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|47018742|gb|EAL09493.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
          Length = 221

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  + ++LPQ ++ ++P +
Sbjct: 94  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLQKIVLPQVVKRVLPAI 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 154 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 212

Query: 388 LNAK 391
           L  +
Sbjct: 213 LEKR 216


>gi|328466492|gb|EGF37635.1| hypothetical protein LM1816_07287 [Listeria monocytogenes 1816]
          Length = 213

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  + ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLQKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQ 204

Query: 388 LNAK 391
           L  +
Sbjct: 205 LEKR 208


>gi|168177791|ref|ZP_02612455.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226947681|ref|YP_002802772.1| amino acid ABC transporter permease [Clostridium botulinum A2 str.
           Kyoto]
 gi|182671578|gb|EDT83552.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226841874|gb|ACO84540.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
          Length = 211

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+
Sbjct: 96  GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+L  A+G  D++     ++ +    I    I   IYL ++  + L    L  K A
Sbjct: 156 SALVAAIGIGDILRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210


>gi|108799999|ref|YP_640196.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119869124|ref|YP_939076.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108770418|gb|ABG09140.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. MCS]
 gi|119695213|gb|ABL92286.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 307

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 1/109 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA++AEI+R+G+ +VP GQ EA+ ALG++     R  +LPQAMR IIPP  ++
Sbjct: 159 IGLGLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNE 218

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            +++LK +SL  AV ++ +L      I     Q I ++++    YL+++
Sbjct: 219 IISMLKTTSLVTAVPYSMELYGRARDIAGVIFQPIPLLMVAATWYLAIT 267


>gi|318076786|ref|ZP_07984118.1| transporter transmembrane component [Streptomyces sp. SA3_actF]
          Length = 389

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 4/129 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS   AA+ AE+VR+GL++V +GQ EAA ALGL  R     ++LPQA+R+I+P   +Q
Sbjct: 234 IGLSLNEAAYAAEVVRAGLLSVDQGQHEAAAALGLPRRFQFLRIVLPQALRAIVPGYVNQ 293

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L+K++SL   V   DL     S+G T        + +  +W  +  SL  +   ++ 
Sbjct: 294 LIGLVKSTSLVFYVSLLDLFGSVQSLGSTYPGDIVPLLLVATVWYVLLTSLVSIAQFYVE 353

Query: 387 RLNAKIALK 395
           R +++ AL+
Sbjct: 354 RRSSRGALR 362


>gi|239815920|ref|YP_002944830.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802497|gb|ACS19564.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 352

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 52/80 (65%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ + AA++AEI+R GL AVPRGQ E A+ALG       R ++LPQA+R ++P LT+  
Sbjct: 223 GLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQRDIVLPQALRLVVPALTNSV 282

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           +  LK++SL   VG  +L  
Sbjct: 283 VGTLKDTSLVTVVGLFELTG 302


>gi|146306126|ref|YP_001186591.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145574327|gb|ABP83859.1| L-ornithine ABC transporter membrane protein / L-arginine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 231

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 10/161 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ I  S + P F S      +A +  T+
Sbjct: 55  WLYTYVIRGTPMLVQLFLLYY------GLAQFDVIRDSFMWPYFSSATFCACLAFAINTS 108

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  +  R +LLP AMR  +P  +++ + +L  +
Sbjct: 109 AYTAEILAGSLKATPPGEIEAARAMGMSRAQLYRRILLPSAMRRALPQYSNEVIMMLHTT 168

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SLA  V   DL     TI +Q     E  +     YL L++
Sbjct: 169 SLASLVTLIDLTGAARTISSQYYMPFEAFITAGLFYLVLTV 209


>gi|322390822|ref|ZP_08064332.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142492|gb|EFX37960.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 228

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 15/209 (7%)

Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------H 245
           V+ I+LS F      L + +  K  ++  ++Y++   I   P ++LI   Y L       
Sbjct: 25  VVSILLSFFPALFLALGQIYKVKGVRSFSVIYLA--FIRATPPILLILFFYSLFPSLLNS 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F K +   FN      ++P + + +I  S  T   +AEI+RS ++ V +GQ+EAA A+GL
Sbjct: 83  FFKSIGSHFNVF---EINPIYYA-FIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAIGL 138

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+R+A   ++ PQA+R+ +P L +  +NL+K +SL   +   D+ ++     +   Q  E
Sbjct: 139 TNRQAYIRIVFPQALRAALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQYFE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             L+   +Y+ +  +I    N L  ++ L
Sbjct: 199 SYLVIFILYIVICGVIQWGFNLLEKRLTL 227


>gi|227532737|ref|ZP_03962786.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189571|gb|EEI69638.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 496

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 342 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 378

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 379 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 438

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 439 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 472


>gi|242374107|ref|ZP_04819681.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
 gi|242348232|gb|EES39834.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
          Length = 375

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 59/80 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQ EAA +LGL + +  + V++PQA+++I+P L ++
Sbjct: 250 IALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYSQTMKFVVMPQAIKNILPALGNE 309

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 310 FVTLIKESSIVSTIGVGEIM 329



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 38/67 (56%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y +  + G  +T  ++  G+I  +I+G L+   +LS  K ++W+  +Y+E  R  P L
Sbjct: 165 TKYGSFFIKGIKDTILISSIGVILGSILGALIALMKLSKFKPLSWLASIYIEFLRGTPML 224

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 225 VQVFIVF 231


>gi|261406921|ref|YP_003243162.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261283384|gb|ACX65355.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 236

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 15/177 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L     + FGLP LV  AL  Q+ +             S+  P     +I+ S  
Sbjct: 63  RGTPMLTHLLLIYFGLPVLV-DALSAQMGWGFK----------SSSIPMIWFAFISFSIT 111

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++E++RSGL+AV RGQ+EAA ++G+T  +A R ++ PQA+   +P L++  + +L 
Sbjct: 112 AGAYMSEVIRSGLLAVNRGQLEAAYSIGMTTWQALRRIVFPQALAVSLPNLSNSVIGMLH 171

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI----ALFMNRLN 389
            S+LA  V   D+ +    + +   +  E  L    I+  L+++I    A+F  R+N
Sbjct: 172 GSTLAFTVSVVDINAQAQIVASTNWKFFESYLAAAAIFWGLTLLIERLTAIFERRIN 228


>gi|115375368|ref|ZP_01462631.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367652|gb|EAU66624.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 435

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 5/125 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+IAEI R+ + ++ +GQMEAA ALG++H  A R V+LPQ  R +IPPL ++
Sbjct: 310 IALSLNAAAYIAEIFRAAIESIDKGQMEAARALGMSHELAMRRVILPQTFRRLIPPLVNE 369

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
              L K++SL + +   +++     + GT +     A   I  ++ I  +LS +      
Sbjct: 370 LAALSKDTSLVMVIALPEMLYETKQLAGTYLRPEVYAWAAI-GYLLIVAALSALAQRLER 428

Query: 387 RLNAK 391
           RL A+
Sbjct: 429 RLEAR 433


>gi|325964014|ref|YP_004241920.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470101|gb|ADX73786.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 279

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 1/92 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   SP F+++   L  Y +A  AEI+R+G+ ++P+GQ EA +A+GLT  K+  L+ LPQ
Sbjct: 124 GFGTSP-FVAVVTGLVLYNSAVFAEIIRAGIQSLPKGQREAGLAIGLTSFKSRMLIELPQ 182

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+R ++P L +Q + LLK++SL   V + +L+
Sbjct: 183 AIRRMMPSLVAQMVVLLKDTSLGYIVAYGELL 214


>gi|319945661|ref|ZP_08019913.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319748260|gb|EFW00502.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 228

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 15/209 (7%)

Query: 195 VLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------H 245
           V+ I+LS F      L + +  K  ++  ++Y++   I   P ++LI   Y L       
Sbjct: 25  VVSILLSFFPALFLALGQIYKVKGVRSFSVVYLA--FIRATPPILLILFFYSLFPSLLNS 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F K +   FN      ++P + + +I  S  T   +AEI+RS ++ V +GQ+EAA A+GL
Sbjct: 83  FFKSIGSHFNVF---EINPIYYA-FIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAIGL 138

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+R+A   ++ PQA+R+ +P L +  +NL+K +SL   +   D+ ++     +   Q  E
Sbjct: 139 TNRQAYIRIVFPQALRAALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQYFE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             L+   +Y+ +  +I    N L  ++ L
Sbjct: 199 SYLVIFILYIVICGVIQWGFNLLEKRLTL 227


>gi|308449227|ref|XP_003087895.1| hypothetical protein CRE_07965 [Caenorhabditis remanei]
 gi|308252035|gb|EFO95987.1| hypothetical protein CRE_07965 [Caenorhabditis remanei]
          Length = 762

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 17/203 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+ + VLG++        SR       + +  +Y++ F   G P LV   L    +F  P
Sbjct: 575 FIIAMVLGLIFGFMKISTSRTL-----RGIAAVYVAVFR--GTPVLVWAFL---FYFGLP 624

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q   + G+     F +    L+  + A++ EIVR GL AV  GQMEAA +LGL   K
Sbjct: 625 ---QLTGVTGNV----FWAGTATLALNSGAYLTEIVRGGLQAVDPGQMEAARSLGLGWGK 677

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + + V++PQA++   P + +Q++  LK+SSL + +GFA+L+     I     +  E+++I
Sbjct: 678 SMQRVVVPQAVKISTPAIINQFVITLKDSSLLLTIGFAELLYQAQQIYAANYRTTEMLII 737

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              +Y  +  ++    N ++ K+
Sbjct: 738 VGIMYFVVITLLTCVANIVDRKV 760


>gi|199599468|ref|ZP_03212860.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|199589640|gb|EDY97754.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
          Length = 488

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 334 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 370

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 371 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 430

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 431 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 464


>gi|113952871|ref|YP_730397.1| polar amino acid ABC transporter permease [Synechococcus sp.
           CC9311]
 gi|113880222|gb|ABI45180.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. CC9311]
          Length = 342

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 73/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A + + AA++AE VR GL ++P  Q EAA ALGL      RL++LPQA+R  +P LT+Q
Sbjct: 212 MAFALFAAAYVAEDVRGGLQSIPPTQAEAAAALGLNASLTMRLIILPQALRIAVPALTNQ 271

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + L++N+SL   +G  +L+ +  +++   +  G+ +E  +    +Y  L   +AL   R
Sbjct: 272 AIGLMQNTSLMAILGLIELLGISRSLLANPDYIGRHLETYVWLAGVYWLLCSAMALLAKR 331

Query: 388 LNAK 391
           +  +
Sbjct: 332 IERQ 335


>gi|296271505|ref|YP_003654137.1| polar amino acid ABC transporter inner membrane subunit
           [Thermobispora bispora DSM 43833]
 gi|296094292|gb|ADG90244.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobispora bispora DSM 43833]
          Length = 290

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 92/164 (56%), Gaps = 16/164 (9%)

Query: 186 NAKIFVFS----FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           N KIF+ +     VLG+ ++L  +  S  F     +A+ +LY   F   G+PT++L+   
Sbjct: 83  NIKIFLIAEPLILVLGLAVALVRSLRSPVFFPL--RAVAVLYTDIFR--GIPTILLV--- 135

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y + F  P L     + G+   P  + + IAL     A++AE+ RSG+ ++   Q  AA 
Sbjct: 136 YLVGFGIPALQ----LQGAPTDPVTLGI-IALVLSYGAYVAEVFRSGIESIHPSQRAAAR 190

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           +LGLTH +  R V+LPQA+R +IPPL + + +L K+S+L   +G
Sbjct: 191 SLGLTHGQTMRHVVLPQAIRRVIPPLLNDFASLQKDSALVAVLG 234


>gi|168184265|ref|ZP_02618929.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|237794766|ref|YP_002862318.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182672656|gb|EDT84617.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|229264093|gb|ACQ55126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Ba4 str. 657]
          Length = 219

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   AA+++EI+R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + 
Sbjct: 94  IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRLQNLCYIILPQAVKISVPPLVNG 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
           + +LLK++SL   +   +L   G  I ++T +  E+ L     Y  L+ +++    F+ +
Sbjct: 154 FSSLLKDTSLVSVISITELTRSGNLIYSRTARPFEVYLTLGLFYFVLTYIVSTCSKFIEK 213

Query: 388 LNAK 391
            N K
Sbjct: 214 RNEK 217


>gi|327192279|gb|EGE59244.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 219

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 65/115 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL  +TAAF+AEI R  + +V  GQ EA+ +LG+   +  R V+LPQA+R  
Sbjct: 84  PAWLAAGMALILWTAAFLAEIWRGCVESVASGQWEASASLGMGRLQQMRYVILPQALRVA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           IPP     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L 
Sbjct: 144 IPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 198


>gi|187921591|ref|YP_001890623.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187720029|gb|ACD21252.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 225

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 2/140 (1%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN   G  V    +S  +A S   AAF  EI+R+G+ ++PRGQ +AA+ALG+T  +  R 
Sbjct: 87  FNLPAG--VDVRLISAMVAYSLLEAAFFCEIIRAGIESLPRGQAQAALALGMTAGQTMRY 144

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA R+++P   +Q + + +++SL   +   D       I  + G  + ++L     
Sbjct: 145 VILPQAFRAMVPVALTQCIVIFQDTSLVYVIALGDFFRRVSAIGERDGTVVPMLLFAGVA 204

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           Y S++  + + +  +  ++A
Sbjct: 205 YWSITTGLTVTVKVVRTRLA 224


>gi|45443739|ref|NP_995278.1| putative amino acid transport system permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|45438609|gb|AAS64155.1| putative amino acid transport system permease [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 269

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 106/216 (49%), Gaps = 11/216 (5%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   V S + G+  ++  T L        G    +L         +P ++
Sbjct: 35  TFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGFFRAIPVIM 94

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+  GQ
Sbjct: 95  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIMAIGAGQ 144

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 145 WQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFLATQV 204

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            N++    +E+ L    +Y  L + + L  N LN +
Sbjct: 205 NNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRR 240


>gi|260102749|ref|ZP_05752986.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260083442|gb|EEW67562.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|328462015|gb|EGF34199.1| glutamine ABC transporter membrane protein [Lactobacillus
           helveticus MTCC 5463]
          Length = 217

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLIRYTKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  +  A +AEIVRSG+ +V  GQME A + G++
Sbjct: 83  ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+  +IP L +Q+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YGQAMYHVVMPQALNHMIPALLAQFVSLVKDTSLATIIVLPELLYNAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   ++   N L  K
Sbjct: 190 MYVIIAIMYFVVCFCLSTIANYLQKK 215


>gi|229171632|ref|ZP_04299207.1| Amino acid ABC transporter [Bacillus cereus MM3]
 gi|228611778|gb|EEK69025.1| Amino acid ABC transporter [Bacillus cereus MM3]
          Length = 207

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 8   TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 62  FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 22  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62


>gi|222106577|ref|YP_002547368.1| glutamine ABC transporter [Agrobacterium vitis S4]
 gi|221737756|gb|ACM38652.1| glutamine ABC transporter [Agrobacterium vitis S4]
          Length = 507

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 95/182 (52%), Gaps = 19/182 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAA 279
           LY   F   GLP +V I L          +GQ F  I      P    L I ALS    A
Sbjct: 67  LYTDIF--RGLPAIVTILL----------IGQGFARIAREIWGPSPYPLGILALSLIAGA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI RSG+ +V RGQ+EA  AL +++ +  RL+++PQ +R ++P L +Q++  +K+SS
Sbjct: 115 YIGEIFRSGIQSVDRGQLEACRALSMSYGQGMRLIIVPQGVRRVLPALVNQFIGNVKDSS 174

Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +G      ++  VG      TG    ++L  MF YL +++ +   +N ++ ++ L 
Sbjct: 175 LVYFLGLLASEREIFRVGQDQAVVTGNLSPLLLAGMF-YLVITVPLTHLVNTIDTRLRLG 233

Query: 396 EK 397
           +K
Sbjct: 234 KK 235


>gi|212709680|ref|ZP_03317808.1| hypothetical protein PROVALCAL_00728 [Providencia alcalifaciens DSM
           30120]
 gi|212687491|gb|EEB47019.1| hypothetical protein PROVALCAL_00728 [Providencia alcalifaciens DSM
           30120]
          Length = 246

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 7/147 (4%)

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G+F++      +P F  + IAL+   A++ ++ +R  L AVP GQ EA +ALGL+ R   
Sbjct: 104 GEFDY------TPFFCGV-IALALLYASYASQTLRGALKAVPYGQWEAGLALGLSKRTIF 156

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
              ++PQ  R  +P L +Q+L LLK+++L   +   DL+    TI+N+T +      I  
Sbjct: 157 FRYIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKTIVNRTHEPFTWYAIVG 216

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IYL+++++  L + R+  +    E+ 
Sbjct: 217 LIYLAITLLSQLVLKRIELRTTRFERS 243


>gi|119946449|ref|YP_944129.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865053|gb|ABM04530.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 359

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE++R GL A+P+GQ EAA +LGL + +   L++LPQA++  IP L   
Sbjct: 231 IGITLFQSAYIAEVIRGGLQAIPKGQYEAAESLGLGYWQGMLLIILPQALKISIPNLVGS 290

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           +++L K+++L + +G  D++++
Sbjct: 291 FISLFKDTTLVLIIGLFDVLAM 312


>gi|288962581|ref|YP_003452876.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288914847|dbj|BAI76332.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 216

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 71/127 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + S  + L+ +TAA++AEI R  + AVP+GQ EA+ +L LT  +  R V+LPQA+R  +P
Sbjct: 86  WTSAAVGLTLFTAAYLAEIWRGCVEAVPKGQWEASASLALTFGEQMRHVILPQALRIAVP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P     + ++K +++   +GF ++   G  I N T Q   +  +   IY +L   ++L  
Sbjct: 146 PTVGFSVQVVKGTAVTSIIGFVEVTKAGTMITNATFQPFLVYGLVGLIYFALCYPLSLSA 205

Query: 386 NRLNAKI 392
             L  K+
Sbjct: 206 KALERKL 212


>gi|119946445|ref|YP_944125.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865049|gb|ABM04526.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 359

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 59/82 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE++R GL A+P+GQ EAA +LGL + +   L++LPQA++  IP L   
Sbjct: 231 IGITLFQSAYIAEVIRGGLQAIPKGQYEAAESLGLGYWQGMLLIILPQALKISIPNLVGS 290

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           +++L K+++L + +G  D++++
Sbjct: 291 FISLFKDTTLVLIIGLFDVLAM 312


>gi|323485584|ref|ZP_08090928.1| hypothetical protein HMPREF9474_02679 [Clostridium symbiosum
           WAL-14163]
 gi|323692932|ref|ZP_08107154.1| hypothetical protein HMPREF9475_02017 [Clostridium symbiosum
           WAL-14673]
 gi|323401102|gb|EGA93456.1| hypothetical protein HMPREF9474_02679 [Clostridium symbiosum
           WAL-14163]
 gi|323503015|gb|EGB18855.1| hypothetical protein HMPREF9475_02017 [Clostridium symbiosum
           WAL-14673]
          Length = 230

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 16/206 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVL 251
           +LGIV+ L    + R  +EKT K   L +I      +I G P +V + + Y + F     
Sbjct: 38  ILGIVIGLIVGVI-RSTYEKTHKLKILNFICNLYLTVIRGTPVVVQLMIIYYVIF----- 91

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  GS    +     +A    + A++AEI RSG++++  GQ EA  +LG  + +  
Sbjct: 92  -------GSLRVDKVPVAVLAFGINSGAYVAEIFRSGIMSIDNGQFEAGRSLGFNYPQTM 144

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             +++PQA ++I+P L +++++LLK +S+A  +   DL   G  I + T  A   +L   
Sbjct: 145 WYIIMPQAFKNILPALCNEFISLLKETSVAGFIALQDLTKGGDIIRSITYSATMPLLAVA 204

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            IYL + I+    +  L  ++   E+
Sbjct: 205 AIYLIIVIIFTQLIKCLERRLRQSER 230


>gi|229028650|ref|ZP_04184764.1| Amino acid ABC transporter [Bacillus cereus AH1271]
 gi|228732669|gb|EEL83537.1| Amino acid ABC transporter [Bacillus cereus AH1271]
          Length = 209

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 10  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 64  FYGLPTLN-------IEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 24  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64


>gi|315151111|gb|EFT95127.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
          Length = 546

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 31/199 (15%)

Query: 195 VLGIVLSLFATRLSRH-----FHEKTGKALPLLYISTFLIFGLPTLVL-------IALKY 242
            LG+++ +F T          F +K G  +  +YI  F   G P +V        +AL +
Sbjct: 337 TLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYIEVFR--GTPMMVQAMVIFYGLALAF 394

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  D+ V                 +L+I +S  T A+++EIVR G+ AV +GQ EAA A
Sbjct: 395 GISLDRTV----------------AALFI-VSVNTGAYMSEIVRGGIFAVDKGQFEAAQA 437

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+TH +  R V++PQ +R+I+P   ++++  +K++++   +G ADL   G        Q
Sbjct: 438 IGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLSVIGVADLFFQGNAASGANFQ 497

Query: 363 AIEIILIWMFIYLSLSIMI 381
             +   I   +YL ++ +I
Sbjct: 498 FFQTFTIVGIMYLVMTFVI 516


>gi|158426030|ref|YP_001527322.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332919|dbj|BAF90404.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 217

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 2/137 (1%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           NF G S + P  M+  I L+   AAF+ EI R  + A+P+GQ EAA ALGL +    + +
Sbjct: 77  NFFGLS-IDP-LMAAAIGLTLNGAAFLGEIWRGCIQAIPKGQWEAATALGLHYTTRMKEI 134

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA +  + P     + L+K++SLA  +GF +L   G  + N T +   +  I   IY
Sbjct: 135 ILPQAAKIAVAPTVGFLVLLVKSTSLASIIGFVELTRAGQIVNNATFRPFLVFGIVAAIY 194

Query: 375 LSLSIMIALFMNRLNAK 391
             L   ++LF  RL  K
Sbjct: 195 FVLCWPLSLFSRRLEKK 211


>gi|330718492|ref|ZP_08313092.1| ABC-type amino acid transport system, permease component
           [Leuconostoc fallax KCTC 3537]
          Length = 220

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 103/210 (49%), Gaps = 31/210 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           V SFV+G +L +       +F    G      + LPLL I  F  F LP       ++ +
Sbjct: 35  VLSFVIGSILGVIRYEKIPYFSRFVGLIIDIVRNLPLLLIIFFTYFALP-------RFGV 87

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H                      S  IA++ + +  +AEI+R GL ++  GQ E A + G
Sbjct: 88  HLSI-----------------LTSAIIAMTAFESMMVAEIIRGGLKSIDFGQTEGARSTG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-A 363
           +++ +    ++LPQA +++IPPL SQ+++L+K++SLA A+   +L+     +  Q     
Sbjct: 131 MSNAQTMWHIILPQAYKTMIPPLISQFISLVKDTSLATAIVLPELMYRAQIVYGQDNTYM 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + I+L+   +Y  ++  ++L     ++K+A
Sbjct: 191 VPILLLIAAMYFVVNYGLSLLAKWFDSKLA 220


>gi|317133175|ref|YP_004092489.1| polar amino acid ABC transporter, inner membrane subunit
           [Ethanoligenens harbinense YUAN-3]
 gi|315471154|gb|ADU27758.1| polar amino acid ABC transporter, inner membrane subunit
           [Ethanoligenens harbinense YUAN-3]
          Length = 228

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 25/184 (13%)

Query: 217 KALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PL+ I  F+IF GLP ++ I++     FD  +               F+S  IA++ 
Sbjct: 61  RGTPLM-IQLFIIFYGLP-MIGISIPSLTFFDTDI-------------SRFISGMIAMAL 105

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            ++A++ EI RSG+ +V  GQ+EA+ +LG  +    R ++LPQA+R+I+P L ++ + ++
Sbjct: 106 NSSAYVCEIFRSGIQSVDDGQVEASRSLGFNYSSTMRFIVLPQALRNILPALGNELVTVI 165

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQA-----IEIILIWMFIYLSLSIMIALF---MNR 387
           K SS+   +G  +L+    TI+  T        I   LI+  I  +LS ++  F   M+R
Sbjct: 166 KESSVISVIGVQELM-YNTTIVRSTTYKSFSPLIITALIYFVITFTLSKLLGKFEKHMSR 224

Query: 388 LNAK 391
            NA+
Sbjct: 225 SNAR 228


>gi|262403073|ref|ZP_06079633.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
 gi|262350572|gb|EEY99705.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
          Length = 298

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 74/134 (55%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + +    +S  + +   ++A+IAEIVR+GL  +P GQ EAA +LGL      R V+ P
Sbjct: 158 GPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPLGQWEAADSLGLPTWVKYRYVIAP 217

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q + +I P L  Q ++L+K++S+   +   +L  VG  + N +G   EI LI    YL L
Sbjct: 218 QVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEMANSSGLIFEIWLIVGAAYLVL 277

Query: 378 SIMIALFMNRLNAK 391
            + +++   ++  +
Sbjct: 278 CLTLSMLFKQVEKR 291


>gi|191639795|ref|YP_001988961.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|190714097|emb|CAQ68103.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
          Length = 488

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 334 RGLPLMVLALFIYNGVPSLI----------------------GSKV-PAFIAGIVTLTLN 370

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 371 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 430

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 431 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 464


>gi|91778421|ref|YP_553629.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691081|gb|ABE34279.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 248

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 24/163 (14%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP+L        +H D                 E  +  +A++    A+  EIVR
Sbjct: 75  FVFFGLPSL-------GIHID-----------------EVQAAILAMTVNLGAYAIEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ++AA ALGL  R+  R V+LPQA+ ++ P L SQ L ++  S++   +  
Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYVVLPQAIANVFPALLSQVLIVMLGSAVVSQISV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            DL      I ++  ++ E  LI    YL LSI++   +NRL 
Sbjct: 171 PDLTYAANFIQSRNFRSFESYLIITATYLVLSIVLRQILNRLG 213


>gi|325678775|ref|ZP_08158373.1| putative arginine ABC transporter, permease protein ArtQ
           [Ruminococcus albus 8]
 gi|324109279|gb|EGC03497.1| putative arginine ABC transporter, permease protein ArtQ
           [Ruminococcus albus 8]
          Length = 226

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 262 VSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +SP+  F ++ I  S   AA+ AEI RSG+ AVP+GQ EA   LG +  +    ++ PQ 
Sbjct: 91  ISPDYRFYAVIIGFSLNYAAYFAEIYRSGIQAVPKGQYEACEILGYSRSQRFFKIVFPQM 150

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +++I+P +T++ + L+K++SLA A+ + ++ +V   +       + + +  +F Y+  + 
Sbjct: 151 VKNILPSVTNEIITLVKDTSLAFAIAYTEMFTVAKQVAASQATILPLFVAGLFYYV-FNF 209

Query: 380 MIALFMNRLNAKI 392
           ++A  M  +  K+
Sbjct: 210 LVAFIMELVEKKM 222


>gi|259651117|dbj|BAI43279.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 487

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 333 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 369

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 370 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 429

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 430 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 463


>gi|258509857|ref|YP_003172608.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
 gi|257149784|emb|CAR88757.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
          Length = 484

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 330 RGLPLMVLALFIYTGVPSLI----------------------GSKV-PAFIAGIVTLTLN 366

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 367 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 426

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 427 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 460


>gi|170016959|ref|YP_001727878.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803816|gb|ACA82434.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 491

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 107/203 (52%), Gaps = 18/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   +LG V +LF  +LS +F  K   A+  +Y+    + G P LV     + + F   V
Sbjct: 303 VIGSILGTVFALF--KLSPNFLLK---AVGNIYVE--YVRGTPLLVQA---FMVFFGTQV 352

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G  N          F +  +A+   +AA++AEI+RSG+ +V  GQ EAA +LGL+  K 
Sbjct: 353 IG-LNL-------SSFAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLSKGKT 404

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA+++I+P L ++++ ++K  S+   +G  +L+   G +   + +    +LI 
Sbjct: 405 MRFIILPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLLIT 464

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
             IY  L+  I+  +     ++A
Sbjct: 465 SMIYFVLTFGISRALGYAEKRMA 487


>gi|330875464|gb|EGH09613.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 324

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 15/199 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS VLG  L+L   RLSR        AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 96  VFSIVLGTALAL--ARLSR---SPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148

Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VL        F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 149 IVLAVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268

Query: 363 AIEIILIWMFIYLSLSIMI 381
            I ++++    YL ++ ++
Sbjct: 269 VIPLLIVATVWYLIITTVL 287


>gi|317057053|ref|YP_004105520.1| polar amino acid ABC transporter inner membrane subunit
           [Ruminococcus albus 7]
 gi|315449322|gb|ADU22886.1| polar amino acid ABC transporter, inner membrane subunit
           [Ruminococcus albus 7]
          Length = 227

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 2/143 (1%)

Query: 251 LGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            G +   G  T S   F ++ I  S   AA+ AEI R+G+ AVP+GQ EA   LG +  +
Sbjct: 82  FGPYYLFGMRTSSEYRFYAVIIGFSLNYAAYFAEIYRAGIQAVPKGQHEACEILGYSKSQ 141

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++ PQ M++IIP +T++ + L+K++SLA A+ + ++ +V   +       + + + 
Sbjct: 142 KFFKIVFPQMMKNIIPAITNEVITLVKDTSLAFAIAYTEMFTVAKQVAAAQSTIMPLFVA 201

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
            +F Y+  +  +A  M  +  K+
Sbjct: 202 GLFYYV-FNFFVAFVMEFIEKKM 223


>gi|327383907|gb|AEA55383.1| hypothetical protein LC2W_3058 [Lactobacillus casei LC2W]
 gi|327387088|gb|AEA58562.1| hypothetical protein LCBD_3073 [Lactobacillus casei BD-II]
          Length = 487

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 26/157 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+ ++ F+  G+P+L+                      GS V P F++  + L+  
Sbjct: 333 RGLPLMVLALFIYNGVPSLI----------------------GSKV-PAFIAGIVTLTLN 369

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK
Sbjct: 370 EGAYTAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLK 429

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++S+   +G  +L   G  II +    +E   IW  +
Sbjct: 430 DTSILSIIGLLELTQTGKIIIARN---MEGFKIWTMV 463


>gi|194016403|ref|ZP_03055017.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
 gi|194011876|gb|EDW21444.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
          Length = 225

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 58/92 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  IAL+ +  A+IAEI R  + ++ +GQ EA  +LG+      R ++LPQAMR  
Sbjct: 92  PDFWAASIALAFHNGAYIAEIFRGAIQSIDQGQKEAGRSLGMGRFLTMRRIILPQAMRRA 151

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           +PPL +Q++  LK+SSLA  +   +L +V  T
Sbjct: 152 LPPLGNQFIIGLKDSSLAAFISVNELFNVATT 183


>gi|270263685|ref|ZP_06191954.1| transporter [Serratia odorifera 4Rx13]
 gi|270042569|gb|EFA15664.1| transporter [Serratia odorifera 4Rx13]
          Length = 295

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 80/136 (58%), Gaps = 5/136 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    + L+   +A+ AEI+R G++ V  GQ EAA ALGL   + T  ++LPQA+RSI+
Sbjct: 146 QFSVAVLGLTLVQSAYTAEIIRGGILGVEYGQHEAAAALGLPGYRRTFRIILPQALRSIV 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIM 380
           P   ++ ++L K +S+   +   +L      I N+T Q I ++++    ++FI  +LS+ 
Sbjct: 206 PTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNRTQQVIPLLMVATVWYLFITTALSV- 264

Query: 381 IALFMNRLNAKIALKE 396
           I  ++ R  A+ A++E
Sbjct: 265 IQYYIERYFARGAVRE 280


>gi|228963947|ref|ZP_04125082.1| Amino acid ABC transporter [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228795798|gb|EEM43271.1| Amino acid ABC transporter [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 226

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 27  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 81  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 133 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 169



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 41  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 81


>gi|226306242|ref|YP_002766202.1| glutamate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|226185359|dbj|BAH33463.1| glutamate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
          Length = 298

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 33/178 (18%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           T+   A   VF+ +LG  L +   RLS H    +  G       +   L   +P L+L+ 
Sbjct: 73  TLIAAAMSIVFALILGSALGI--GRLSEHNIIRKICG-------VIVELFRAVPVLILMI 123

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC-------YTAAFIAEIVRSGLIAV 292
             YQ+  +  V               F S Y+AL+        Y  + IAEIVR+G+ ++
Sbjct: 124 FSYQVFAEYEV---------------FKSKYLALAAVVVGLTLYNGSVIAEIVRAGINSL 168

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           PRGQ EAA ALG+   +    +LLPQA+ +++P L SQ +  LK+S+L   +G+ +LV
Sbjct: 169 PRGQSEAAKALGMRKTQIMVTILLPQAVTAMLPALISQMVVALKDSALGYLIGYVELV 226



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)

Query: 55  SNLSLGIGFLSERAGFEIDQGIV----PYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110
           + L + IG++  RA  E  Q       P+   +S+ T ++ G   T   A   ++ A I+
Sbjct: 28  AALMVAIGYVIYRALDEKGQLTAAKWDPFLESTSWTTYLIPGIRGTLIAAAMSIVFALIL 87

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           G+ +G GRLS + ++  IC V VE+FR +P L+++ F Y+
Sbjct: 88  GSALGIGRLSEHNIIRKICGVIVELFRAVPVLILMIFSYQ 127


>gi|213970630|ref|ZP_03398756.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301382055|ref|ZP_07230473.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060918|ref|ZP_07252459.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302133951|ref|ZP_07259941.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213924627|gb|EEB58196.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 324

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 96/193 (49%), Gaps = 15/193 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS VLG  L+L   RLSR        AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 96  VFSIVLGTALAL--ARLSR---SPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148

Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VL        F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 149 IVLAVPFTDLVFAQWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268

Query: 363 AIEIILIWMFIYL 375
            I ++++    YL
Sbjct: 269 VIPLLIVATVWYL 281


>gi|161507109|ref|YP_001577063.1| glutamine ABC transporter membrane protein [Lactobacillus
           helveticus DPC 4571]
 gi|160348098|gb|ABX26772.1| Glutamine ABC transporter (membrane protein) [Lactobacillus
           helveticus DPC 4571]
          Length = 217

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLIRYTKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  +  A +AEIVRSG+ +V  GQME A + G++
Sbjct: 83  ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDPGQMEGARSNGMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+  +IP L +Q+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YGQAMYHVVMPQALNHMIPALLAQFVSLVKDTSLATIIVLPELLYNAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   ++   N L  K
Sbjct: 190 MYVIIAIMYFVVCFCLSTIANYLQKK 215


>gi|320330785|gb|EFW86759.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 222

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213

Query: 391 KI 392
           ++
Sbjct: 214 RV 215


>gi|315649608|ref|ZP_07902693.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus vortex V453]
 gi|315275081|gb|EFU38456.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus vortex V453]
          Length = 220

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 76/135 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  I L  + + +++E+ RSG+  VP+GQ EAA AL  T  +  R ++LPQA+  I
Sbjct: 86  PAFYAGVIGLGLHYSTYLSEVYRSGIEGVPKGQWEAATALNYTKTQTWRSIILPQAVPPI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L +  + + K + +  A+   +++     I++Q+ +A E   +   ++L +S + +L
Sbjct: 146 IPVLGNYLIVMFKETPILCAITLVEMMLTAKNIVSQSFRAFEPYTLVGILFLIISYIASL 205

Query: 384 FMNRLNAKIALKEKK 398
            + RL  ++ L+  K
Sbjct: 206 LVQRLEKRMNLQRGK 220


>gi|258645825|ref|ZP_05733294.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403195|gb|EEW96742.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 230

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 7/187 (3%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QF-NFIGGSTVSPEFMSLYI 271
           K  +A+  +Y+   +I G P LV I+L +   F  P LG QF NF           +  +
Sbjct: 49  KILQAVAAVYVE--VIRGTPVLVQISLVF---FGLPFLGIQFPNFEIWGVDFERLSAGVL 103

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   + A+  EIVRSG+ ++ +GQ+EAA++LG +  ++   +++PQA+R+I+P + +++
Sbjct: 104 ALILNSGAYQCEIVRSGIQSIHKGQLEAAMSLGFSKWESMVRIIIPQAIRNILPVIGNEF 163

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L+K SS    +G ADL+    TI   + Q    ++I    Y  ++  ++  +  L  +
Sbjct: 164 VTLIKESSQVSVIGMADLMYTAATIQGISFQPFPPLVIVAVYYFVMTFFVSSCLRVLEIR 223

Query: 392 IALKEKK 398
           + ++  +
Sbjct: 224 LKVRSVR 230


>gi|157694048|ref|YP_001488510.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157682806|gb|ABV63950.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 225

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 58/92 (63%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  IAL+ +  A+IAEI R  + ++ +GQ EA  +LG+      R ++LPQAMR  
Sbjct: 92  PDFWAASIALAFHNGAYIAEIFRGAIQSIDQGQKEAGRSLGMGRFLTMRRIILPQAMRRA 151

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           +PPL +Q++  LK+SSLA  +   +L +V  T
Sbjct: 152 LPPLGNQFIIGLKDSSLAAFISVNELFNVATT 183


>gi|116248756|ref|YP_764597.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|241113599|ref|YP_002973434.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|115253406|emb|CAK11794.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|240861807|gb|ACS59473.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 65/115 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++   AL  ++AAF+AEI R  + AV +GQ EA+ +LG+   +  R V+LPQA+R  
Sbjct: 84  PAWLAAGFALILWSAAFLAEIWRGCVEAVVKGQWEASASLGMGRLQQMRYVILPQALRVA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           IPP     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L 
Sbjct: 144 IPPTVGFSVQIVKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 198


>gi|28872293|ref|NP_794912.1| cystine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213969394|ref|ZP_03397531.1| cystine ABC tranporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301386653|ref|ZP_07235071.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061130|ref|ZP_07252671.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato K40]
 gi|302132934|ref|ZP_07258924.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28855547|gb|AAO58607.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925765|gb|EEB59323.1| cystine ABC tranporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
 gi|330966437|gb|EGH66697.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331016087|gb|EGH96143.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 222

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYACEILRAAIGSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213

Query: 391 KI 392
           ++
Sbjct: 214 RV 215



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           RLS  KLV WI R+YV  FR  P LV +F +Y
Sbjct: 45  RLSRFKLVNWIARIYVSFFRGTPLLVQLFVIY 76


>gi|242243079|ref|ZP_04797524.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|242233427|gb|EES35739.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
          Length = 485

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 59/80 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI R+G+ AV +GQ EAA +LG+ +R+  + V++PQA++ I+P L ++
Sbjct: 360 IALVINSSAYIAEIFRAGINAVDKGQTEAARSLGMNYRQTMQSVVMPQAIKKILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G ++++
Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 27/145 (18%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           FS+ KF  + +   I+V     +LL  +     N   +N+++ NL              I
Sbjct: 216 FSKTKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256

Query: 73  DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           DQ +     D        S Y +  + G  NT  ++  G++  +I+G+ +   +LS  + 
Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKLSKIRP 316

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           + WI  +Y+E  R  P LV +F ++
Sbjct: 317 LQWIAGIYIEFLRGTPMLVQVFIVF 341


>gi|190895200|ref|YP_001985493.1| nopaline ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700861|gb|ACE94943.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 231

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T+   G P LV + L Y      P++ Q +F+      P F   +IA +  +AA   EI+
Sbjct: 57  TYCFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWPVMREP-FWCAFIAFTLNSAAHTTEIL 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVPRGQ+EAA ALGL+     RL++ P  +R  +P   ++ + LLK SSLA  + 
Sbjct: 115 RGGIQAVPRGQVEAAKALGLSSFHTARLIVFPLTIRIALPAYVNEVIGLLKASSLASTIT 174

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  +   +++QT    E+ ++    YL  +++I
Sbjct: 175 LLEMTGLARQLVSQTFAPYEVFVVAGAFYLMFTLLI 210


>gi|28870188|ref|NP_792807.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853434|gb|AAO56502.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 324

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 96/193 (49%), Gaps = 15/193 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS VLG  L+L   RLSR        AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 96  VFSIVLGTALAL--ARLSR---SPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148

Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VL        F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 149 IVLAVPFTDLVFAQWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268

Query: 363 AIEIILIWMFIYL 375
            I ++++    YL
Sbjct: 269 VIPLLIVATVWYL 281


>gi|87122497|ref|ZP_01078377.1| putative amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
 gi|86162290|gb|EAQ63575.1| putative amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
          Length = 216

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 68/121 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L+ +T+AF+ EI R  +  +P+GQ EA+  LGL+  +  R ++LPQA+R   PP    
Sbjct: 91  LSLTLFTSAFLVEIWRGCIDTLPKGQREASRCLGLSFLQTLRYIILPQAIRVATPPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K ++LA  +GF +L  VG  + N T +  ++  +   IY  L   ++ +   L  
Sbjct: 151 SVQVIKGTALASVIGFVELTKVGTMLNNATFEPFKVFTLVALIYFLLCYPLSWYSKTLEK 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|331700561|ref|YP_004397520.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329127904|gb|AEB72457.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 467

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 86/161 (53%), Gaps = 23/161 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K++P++ ++ F+  G+P L                       G  + P F++  I +   
Sbjct: 311 KSIPVMVLAFFVYIGIPNLT----------------------GEKI-PLFIAGVITIVME 347

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A+ A  VR G+ AV  GQMEAA + G+++ +A R ++LPQA+R + P   +Q++  LK
Sbjct: 348 NSAYTASFVRGGIEAVEGGQMEAARSNGMSYFQAMRYIVLPQALRIMAPSFINQFIIALK 407

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +S+  A+G A+L   G  II++  +  ++ L+   +YL++
Sbjct: 408 GTSVLSAIGVAELTQQGTIIISRNMEGFKVWLLVSLMYLAM 448


>gi|319401122|gb|EFV89341.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Staphylococcus epidermidis FRI909]
          Length = 485

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 59/80 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI R+G+ AV +GQ EAA +LG+ +R+  + V++PQA++ I+P L ++
Sbjct: 360 IALVINSSAYIAEIFRAGINAVDKGQTEAARSLGMNYRQTMQSVVMPQAIKKILPALGNE 419

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G ++++
Sbjct: 420 FVTLIKESSIVSTIGVSEIM 439



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 27/145 (18%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           FS+ KF  + +   I+V     +LL  +     N   +N+++ NL              I
Sbjct: 216 FSKTKFNEEKKQTCIAVPKNSPVLLDKL-----NQTIDNVKEKNL--------------I 256

Query: 73  DQGIVPYTSD--------SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           DQ +     D        S Y +  + G  NT  ++  G++  +I+G+ +   +LS  + 
Sbjct: 257 DQYMTKAAEDMQDDGNFISKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKLSKIRP 316

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLY 149
           + WI  +Y+E  R  P LV +F ++
Sbjct: 317 LQWIAGIYIEFLRGTPMLVQVFIVF 341


>gi|238897255|ref|YP_002922932.1| polar amino acid ABC transporter permease [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229465010|gb|ACQ66784.1| polar amino acid ABC transporter permease [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 225

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 75/129 (58%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+  ++   L+  T+A++A  V+SG++AV +GQ  A ++LGL   +  R ++LPQ +R +
Sbjct: 94  PKITTVVCGLALITSAYLAHAVKSGIVAVGQGQWSAGLSLGLNSWQILRFIILPQVLRVM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
            P   +Q+++L+K++SLA  VG  +L  +   + N+T   ++E+ L    IY  L  ++ 
Sbjct: 154 FPSFVNQWISLIKDTSLAYIVGVNELTFLATQVNNRTMVHSMEVFLFVGLIYFILCFILD 213

Query: 383 LFMNRLNAK 391
             +N    K
Sbjct: 214 FSVNYFLKK 222


>gi|224371422|ref|YP_002605586.1| GltJ2 [Desulfobacterium autotrophicum HRM2]
 gi|223694139|gb|ACN17422.1| GltJ2 [Desulfobacterium autotrophicum HRM2]
          Length = 240

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 31/223 (13%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---------- 227
           + TLT+   A  +  + VLGI ++       R FH K  +AL L Y+  F          
Sbjct: 25  WTTLTLSLAA--WCVAVVLGIGVAA-----CRVFHNKCLRALGLGYVLVFRNIPFLVQLF 77

Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
              F  P L+  +++  ++   P   ++ F  G+T           L  YTA+ +AE  R
Sbjct: 78  FWYFAAPLLLPRSIQDWMYDTVP---EYAFWCGAT----------GLGMYTASRVAEQFR 124

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G +A+   Q  AA A GL   +    V+LP A R IIP  T+++L   KNS+L + +G 
Sbjct: 125 AGFLAISEDQYRAAYATGLRPAQVYGYVILPYAFRIIIPAFTTEFLTCFKNSALTMTIGV 184

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            ++      I + T   +E        YL+++  +AL M R+ 
Sbjct: 185 MEITHTAYIIDSFTWHGLETTTAASLCYLTIAQGVALVMWRIE 227



 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 10/112 (8%)

Query: 79  YTSDSS------YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           YT D S      Y   +L G   T  L+ +    A ++G  V A R+  NK +  +   Y
Sbjct: 4   YTFDWSVLWRQPYGAMMLSGIWTTLTLSLAAWCVAVVLGIGVAACRVFHNKCLRALGLGY 63

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP--IPD--HSIVLPFGMFLNNRGLSFPT 180
           V VFRNIP LV +FF Y +   +LP  I D  +  V  +  +    GL   T
Sbjct: 64  VLVFRNIPFLVQLFFWYFAAPLLLPRSIQDWMYDTVPEYAFWCGATGLGMYT 115


>gi|152994484|ref|YP_001339319.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835408|gb|ABR69384.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 216

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L+ +T+AF+ EI R  +  +P+GQ EA+  LGL+  +  R ++LPQA+R    P    
Sbjct: 91  LSLTFFTSAFLVEIWRGCIDTLPKGQWEASRCLGLSFLQTLRFIILPQAIRVATAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K ++LA  +GF +L  VG  + N T +  +I  +   IY  L   ++L+   L  
Sbjct: 151 SVQVIKGTALASVIGFVELTKVGTMLNNATFEPFKIFTLVALIYFVLCYPLSLYSKHLEK 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|51598239|ref|YP_072430.1| ABC amino acid transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|170026443|ref|YP_001722948.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186897482|ref|YP_001874594.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|51591521|emb|CAH23193.1| ABC amino acid transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|169752977|gb|ACA70495.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186700508|gb|ACC91137.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 251

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G++A+  GQ +A ++LG    +    ++LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213

Query: 383 LFMNRLNAK 391
           L  N LN +
Sbjct: 214 LLANGLNRR 222


>gi|56808255|ref|ZP_00366025.1| COG0765: ABC-type amino acid transport system, permease component
           [Streptococcus pyogenes M49 591]
          Length = 210

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 73/131 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  Y+  S  +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQ  R  
Sbjct: 79  PALLCAYLGFSMVSAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQVFRIA 138

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++  
Sbjct: 139 VPPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLER 198

Query: 384 FMNRLNAKIAL 394
           +   L  K+AL
Sbjct: 199 YQEFLENKLAL 209


>gi|302542075|ref|ZP_07294417.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302459693|gb|EFL22786.1| glutamate permease [Streptomyces himastatinicus ATCC 53653]
          Length = 311

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 73/125 (58%), Gaps = 5/125 (4%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  F +L + L+ Y  +  AE++R+G+ +VPRGQ EAA ALG++  +    VL+PQA+R+
Sbjct: 139 STGFWALVVGLTVYNGSVQAEVLRAGINSVPRGQREAAYALGMSKTQVMTTVLIPQAVRA 198

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           ++P + SQ +  LK++SL   + +           G  ++N     + +I++   IY+++
Sbjct: 199 MLPTIISQLVVTLKDTSLGYVITYQELLFQLQQLAGNIVVNDDNPYVPVIIVGGTIYIAM 258

Query: 378 SIMIA 382
            + ++
Sbjct: 259 CLALS 263


>gi|229490879|ref|ZP_04384714.1| glutamate transporter permease protein GluD [Rhodococcus
           erythropolis SK121]
 gi|229322269|gb|EEN88055.1| glutamate transporter permease protein GluD [Rhodococcus
           erythropolis SK121]
          Length = 298

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 33/178 (18%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           T+   A   VF+ +LG  L +   RLS H    +  G       +   L   +P L+L+ 
Sbjct: 73  TLIAAAMSIVFALILGSALGI--GRLSEHNIIRKICG-------VIVELFRAVPVLILMI 123

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC-------YTAAFIAEIVRSGLIAV 292
             YQ+  +  V               F S Y+AL+        Y  + IAEIVR+G+ ++
Sbjct: 124 FSYQVFAEYEV---------------FKSKYLALAAVVVGLTLYNGSVIAEIVRAGINSL 168

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           PRGQ EAA ALG+   +    +LLPQA+ +++P L SQ +  LK+S+L   +G+ +LV
Sbjct: 169 PRGQSEAAKALGMRKTQIMVTILLPQAVTAMLPALISQMVVALKDSALGYLIGYVELV 226



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)

Query: 55  SNLSLGIGFLSERAGFEIDQGIV----PYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110
           + L + IG++  RA  E  Q       P+   +S+ T ++ G   T   A   ++ A I+
Sbjct: 28  AALMVAIGYVIYRALDEKGQLTAAKWDPFLESTSWTTYLIPGIRGTLIAAAMSIVFALIL 87

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           G+ +G GRLS + ++  IC V VE+FR +P L+++ F Y+
Sbjct: 88  GSALGIGRLSEHNIIRKICGVIVELFRAVPVLILMIFSYQ 127


>gi|168701474|ref|ZP_02733751.1| Amino acid ABC transporter binding protein and permease protein
           [Gemmata obscuriglobus UQM 2246]
          Length = 516

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/70 (48%), Positives = 54/70 (77%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   +A+ AE  R+GL+AVPRGQMEAA+ALG++   A R+V++PQA R +IPP+T+ 
Sbjct: 386 LGLAINYSAYEAENYRAGLLAVPRGQMEAALALGMSPLTALRVVIVPQAARIVIPPVTND 445

Query: 331 YLNLLKNSSL 340
           ++ L K++S+
Sbjct: 446 FIALFKDTSV 455


>gi|59710614|ref|YP_203390.1| cystine transport system permease protein [Vibrio fischeri ES114]
 gi|59478715|gb|AAW84502.1| cystine transport system permease protein [Vibrio fischeri ES114]
          Length = 223

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 12/144 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R F       L  LYIS F   G P LV L  L Y L    P+     F+G       F 
Sbjct: 44  RVFKVPVFDQLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPI-----FVGLDA----FS 92

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L+ + AA++AE +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L
Sbjct: 93  AAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSIGMTTSQAMRRIILPQATRVALPSL 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVS 351
            + +++++K++SLA  +G A++++
Sbjct: 153 MNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|259501521|ref|ZP_05744423.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus iners DSM 13335]
 gi|302191506|ref|ZP_07267760.1| Glutamine ABC transporter, permease protein [Lactobacillus iners
           AB-1]
 gi|309804259|ref|ZP_07698336.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 11V1-d]
 gi|309805507|ref|ZP_07699552.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 09V1-c]
 gi|309808597|ref|ZP_07702489.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 01V1-a]
 gi|309809500|ref|ZP_07703358.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners SPIN 2503V10-D]
 gi|312871490|ref|ZP_07731584.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 3008A-a]
 gi|312872417|ref|ZP_07732486.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2062A-h1]
 gi|312874423|ref|ZP_07734453.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2052A-d]
 gi|312874570|ref|ZP_07734595.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2053A-b]
 gi|325911827|ref|ZP_08174231.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners UPII 143-D]
 gi|325913453|ref|ZP_08175819.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners UPII 60-B]
 gi|329920202|ref|ZP_08277014.1| putative glutamine ABC transporter permease protein GlnP
           [Lactobacillus iners SPIN 1401G]
 gi|259167039|gb|EEW51534.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus iners DSM 13335]
 gi|308163662|gb|EFO65932.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 11V1-d]
 gi|308165158|gb|EFO67396.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 09V1-c]
 gi|308168071|gb|EFO70197.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 01V1-a]
 gi|308170172|gb|EFO72207.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners SPIN 2503V10-D]
 gi|311089961|gb|EFQ48380.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2053A-b]
 gi|311090035|gb|EFQ48449.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2052A-d]
 gi|311091999|gb|EFQ50374.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2062A-h1]
 gi|311093010|gb|EFQ51360.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 3008A-a]
 gi|325476333|gb|EGC79495.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners UPII 143-D]
 gi|325477222|gb|EGC80368.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners UPII 60-B]
 gi|328936423|gb|EGG32869.1| putative glutamine ABC transporter permease protein GlnP
           [Lactobacillus iners SPIN 1401G]
          Length = 219

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 31/212 (14%)

Query: 191 VFSFVLGIVLSL---FATRLSRH---FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + SF+LG+ L +      ++  H   F     + LPLL I  F  FGLP           
Sbjct: 32  ILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPLLLIIFFAYFGLP----------- 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                   Q   +   T +       IAL  +  A +AEIVRSG+ AV +GQ+E A++ G
Sbjct: 81  --------QLGIVTNVTCAA-----IIALVVFEGAMLAEIVRSGIGAVNKGQLEGALSNG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQA 363
           +T+ +A   V++PQA+  +IP + SQ+++L+K++SLA  +   +L+     I +Q T   
Sbjct: 128 MTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIYSQNTTYL 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +I   +Y  +   ++L  + L  + + K
Sbjct: 188 LPMYVIVALMYFIICFTLSLIADHLQKQYSAK 219


>gi|108810144|ref|YP_654060.1| putative amino acid transport system permease [Yersinia pestis
           Antiqua]
 gi|108814126|ref|YP_649893.1| amino acid transport system permease [Yersinia pestis Nepal516]
 gi|145601164|ref|YP_001165240.1| amino acid transport system permease [Yersinia pestis Pestoides F]
 gi|150260957|ref|ZP_01917685.1| putative amino acid transport system permease [Yersinia pestis
           CA88-4125]
 gi|162421147|ref|YP_001608459.1| polar amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926123|ref|ZP_02221955.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939983|ref|ZP_02228520.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009454|ref|ZP_02230352.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213182|ref|ZP_02239217.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401543|ref|ZP_02307037.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422872|ref|ZP_02314625.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425488|ref|ZP_02317241.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468128|ref|ZP_02332832.1| putative amino acid transport system permease [Yersinia pestis
           FV-1]
 gi|218931085|ref|YP_002348960.1| putative amino acid transport system permease [Yersinia pestis
           CO92]
 gi|229839817|ref|ZP_04459976.1| putative amino acid transport system permease [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229841902|ref|ZP_04462058.1| putative amino acid transport system permease [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229896779|ref|ZP_04511942.1| putative amino acid transport system permease [Yersinia pestis
           Pestoides A]
 gi|229904667|ref|ZP_04519778.1| putative amino acid transport system permease [Yersinia pestis
           Nepal516]
 gi|294505632|ref|YP_003569694.1| putative amino acid transport system permease [Yersinia pestis
           Z176003]
 gi|108777774|gb|ABG20293.1| amino acid transport system permease [Yersinia pestis Nepal516]
 gi|108782057|gb|ABG16115.1| putative amino acid transport system permease [Yersinia pestis
           Antiqua]
 gi|115349696|emb|CAL22677.1| putative amino acid transport system permease [Yersinia pestis
           CO92]
 gi|145212860|gb|ABP42267.1| amino acid transport system permease [Yersinia pestis Pestoides F]
 gi|149290365|gb|EDM40442.1| putative amino acid transport system permease [Yersinia pestis
           CA88-4125]
 gi|162353962|gb|ABX87910.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis Angola]
 gi|165912109|gb|EDR30749.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921983|gb|EDR39160.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991376|gb|EDR43677.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205480|gb|EDR49960.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958264|gb|EDR55285.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048925|gb|EDR60333.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055502|gb|EDR65295.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229678785|gb|EEO74890.1| putative amino acid transport system permease [Yersinia pestis
           Nepal516]
 gi|229691241|gb|EEO83294.1| putative amino acid transport system permease [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696183|gb|EEO86230.1| putative amino acid transport system permease [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229700217|gb|EEO88253.1| putative amino acid transport system permease [Yersinia pestis
           Pestoides A]
 gi|262363797|gb|ACY60518.1| putative amino acid transport system permease [Yersinia pestis
           D106004]
 gi|262367733|gb|ACY64290.1| putative amino acid transport system permease [Yersinia pestis
           D182038]
 gi|294356091|gb|ADE66432.1| putative amino acid transport system permease [Yersinia pestis
           Z176003]
 gi|320017441|gb|ADW01013.1| putative amino acid transport system permease [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 251

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G++A+  GQ +A ++LG    +    ++LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213

Query: 383 LFMNRLNAK 391
           L  N LN +
Sbjct: 214 LLANGLNRR 222


>gi|322804727|emb|CBZ02279.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           H04402 065]
          Length = 214

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+
Sbjct: 99  GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 158

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+L  A+G  D++     ++ +    I    I   IYL ++  + +    L  K A
Sbjct: 159 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVIIFRTLEKKCA 213


>gi|319776668|ref|YP_004139156.1| amino-acid ABC transporter permease [Haemophilus influenzae F3047]
 gi|329124186|ref|ZP_08252733.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus aegyptius ATCC 11116]
 gi|317451259|emb|CBY87493.1| probable amino-acid ABC transporter permease protein [Haemophilus
           influenzae F3047]
 gi|327467611|gb|EGF13109.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus aegyptius ATCC 11116]
          Length = 238

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 110/207 (53%), Gaps = 19/207 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++ +++++  T    +F  K  +++   YIS  +I G P LV I   + + +  P
Sbjct: 45  FFCGLLIAVIVAVICTLPHPNFMTKLLQSIGRAYIS--IIRGTPMLVQI---FIIFYGLP 99

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G         + P F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +++
Sbjct: 100 EVG-------IKLEP-FPTAIIAFSVNIGAYAAETVRASIIAIPKGQWEASYAIGMNYQQ 151

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A    ++PQA+R  +P L++ +++ +K++SLA  V  A+L  V   I   T +  E ILI
Sbjct: 152 AFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVWIAELFRVAQNI---TAENYEFILI 208

Query: 370 W---MFIYLSLSIMIALFMNRLNAKIA 393
           +     IY     ++++   RL  +++
Sbjct: 209 YSEAALIYWVFCFVLSIGQMRLEKRLS 235


>gi|315657916|ref|ZP_07910790.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
 gi|315496952|gb|EFU85273.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
          Length = 497

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 61/85 (71%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   IAL   ++A+IAEI+R+G+ AV +GQ EAA  LGL + +  + V++PQA+++I+P
Sbjct: 367 FICGIIALIINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYNQTMKNVIMPQAIKNILP 426

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            L ++++ L+K SS+   +G ++++
Sbjct: 427 ALGNEFVTLIKESSIVSTIGVSEVM 451



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y +  + G VNT  L+  G+I   ++GTL+   +LS  K+++WI   Y+E+ R  P L
Sbjct: 287 TKYGSFFVKGIVNTIILSAIGVIIGAVLGTLIALAKLSKIKIISWIAAAYIEIIRGTPLL 346

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 347 VQVFIVF 353


>gi|283797387|ref|ZP_06346540.1| glutamine ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291075063|gb|EFE12427.1| glutamine ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|295090529|emb|CBK76636.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
 gi|295115439|emb|CBL36286.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SM4/1]
          Length = 230

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 72/122 (59%), Gaps = 4/122 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    + A++AEI RSG++++  GQ EA  +LG  + +    +++PQA ++++P L ++
Sbjct: 104 LAFGINSGAYVAEIFRSGIMSIDNGQFEAGRSLGFNYPQTMWYIIMPQAFKNVLPALCNE 163

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           ++ LLK +S+A  +G  DL   G  I ++T  A    I + LI++ I L  + +I +   
Sbjct: 164 FIALLKETSIAGYIGLQDLTKGGDIIRSRTYSAFMPLIAVALIYLAIVLIFTQLIKILER 223

Query: 387 RL 388
           RL
Sbjct: 224 RL 225


>gi|257885498|ref|ZP_05665151.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257821354|gb|EEV48484.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
          Length = 213

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 41/221 (18%)

Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231
           T  K+F+F+ +    LGI+L+L    LS HF         +    +  PLL    F+ +G
Sbjct: 17  TTLKLFLFTLIGSLPLGIILAL---GLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFIFYG 73

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LPT+ ++       FD+                 F +  IA     AA+ AEI R G+ +
Sbjct: 74  LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 109

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +G  D++ 
Sbjct: 110 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 169

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G   + +    + ++ + + IYL+L+ ++ + M ++  K+
Sbjct: 170 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 209


>gi|153948328|ref|YP_001403105.1| polar amino acid ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|152959823|gb|ABS47284.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 251

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G++A+  GQ +A ++LG    +    ++LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHAVKAGIMAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALVYFVLCLALD 213

Query: 383 LFMNRLNAK 391
           L  N LN +
Sbjct: 214 LLANGLNRR 222


>gi|148273185|ref|YP_001222746.1| putative glutamate ABC transporter, permease [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831115|emb|CAN02067.1| putative glutamate ABC transpoter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 274

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + S+  AL+ Y  A I E +RSG++ +PRGQ EA +A+GL   +   LV  PQA R+++P
Sbjct: 130 YWSVVTALALYNGAIIGEALRSGILGLPRGQREAGLAIGLRPLQNRLLVEFPQAFRTMLP 189

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIAL 383
            + +Q + L+K+++L   V    L   G  I+  T +  ++ I ++ + +YL L++ ++ 
Sbjct: 190 IIVAQLVVLIKDTALGTIVSLVGLTKQGELILEATSRDNSLPIFVVMVGMYLVLNLSVST 249

Query: 384 FMNRLNAK 391
              RL  K
Sbjct: 250 IARRLARK 257


>gi|330871999|gb|EGH06148.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 165

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 70/122 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 37  IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 96

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 97  FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 156

Query: 391 KI 392
           ++
Sbjct: 157 RV 158


>gi|288960750|ref|YP_003451090.1| amino acid ABC transporter permease protein [Azospirillum sp. B510]
 gi|288913058|dbj|BAI74546.1| amino acid ABC transporter permease protein [Azospirillum sp. B510]
          Length = 215

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/121 (39%), Positives = 67/121 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++   AL   + A+++EI R  L AVP GQ EAA+ALG         +LLPQA R  
Sbjct: 84  PPLVASIAALGLASGAYVSEIYRGALNAVPHGQSEAALALGFPGWSIWSRILLPQAFRIS 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++ + LLK SSL   VG A+L     TI     + +EI L    IYL+++  +AL
Sbjct: 144 VPALVNELILLLKASSLISVVGVAELTRTSQTISASNYRPLEIYLAAGLIYLAINGALAL 203

Query: 384 F 384
           F
Sbjct: 204 F 204


>gi|116629029|ref|YP_814201.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri ATCC 33323]
 gi|300362321|ref|ZP_07058497.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|116094611|gb|ABJ59763.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus gasseri ATCC 33323]
 gi|300353312|gb|EFJ69184.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 217

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 17/205 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246
           +IF ++ V+ I L L       H + K  KA+   Y+  ++I G P L+ LI + Y L  
Sbjct: 24  EIFFWTTVVSIPLGLLVA-FGLHSNLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G         V P + +  +A     AA+ AEI R GL AVP GQ EAA  LGL+
Sbjct: 79  --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G     +    + +
Sbjct: 129 RWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
           +L+   +YL+++ ++   +  +  K
Sbjct: 189 VLV-GCVYLAMTAVLTALLRVVEKK 212


>gi|148543531|ref|YP_001270901.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184152937|ref|YP_001841278.1| ABC transporter permease component [Lactobacillus reuteri JCM 1112]
 gi|227363514|ref|ZP_03847634.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus reuteri MM2-3]
 gi|227545192|ref|ZP_03975241.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus reuteri CF48-3A]
 gi|300909131|ref|ZP_07126592.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|325681879|ref|ZP_08161397.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530565|gb|ABQ82564.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183224281|dbj|BAG24798.1| ABC transporter permease component [Lactobacillus reuteri JCM 1112]
 gi|227071451|gb|EEI09754.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus reuteri MM2-3]
 gi|227184838|gb|EEI64909.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus reuteri CF48-3A]
 gi|300892996|gb|EFK86355.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|324978523|gb|EGC15472.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 233

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 104/201 (51%), Gaps = 6/201 (2%)

Query: 191 VFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + SF  G++++L     RLSR    + G  + L +I++F ++   +  L+   + + F  
Sbjct: 25  IISFFFGLIIALVTALIRLSR----QRGAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L     +        F +  I  S  T A+ +E +R+ + +VP GQ EA  A+G+T  
Sbjct: 81  PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAISSVPTGQWEAGAAIGMTRL 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA+R  +PPL++ +++L+K++SLA ++   ++ +V   I  +  Q + +  
Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
           +   +Y   + +++ F   L 
Sbjct: 201 LVAMVYAVFTTVLSYFQGYLE 221


>gi|319945586|ref|ZP_08019838.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319748185|gb|EFW00427.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 520

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 64/109 (58%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G++AV  GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGILAVDTGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  Q  Q      I   IY  L+  I
Sbjct: 443 INIKDTSVLNVISVVELYFTGNTVATQNYQYFPTFTIIAVIYFILTFTI 491


>gi|317047372|ref|YP_004115020.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948989|gb|ADU68464.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 218

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 13/196 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G V+ L A    R    +  K + L+++   LI G P +V +   Y   F  P++     
Sbjct: 33  GFVIGLLAGT-CRALGGRITKTISLIFVE--LIRGTPIMVQVMFIY---FALPMVLPIRI 86

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                VS   +++ I     + A+IAEI R  ++++ +G  EA++A+GL+ R     V++
Sbjct: 87  ---DPVSAAIVTIIIN----SGAYIAEITRGAILSINKGFKEASLAMGLSQRSTLWYVIM 139

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R +IP L +Q++  +K++SL + +G A+L   G  II    +A+E+      IYL 
Sbjct: 140 PLALRRMIPALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVALIYLL 199

Query: 377 LSIMIALFMNRLNAKI 392
           +++ ++  + +L  +I
Sbjct: 200 VTLCLSFLLKQLEKRI 215



 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 34/60 (56%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           ++ SG++   +IG L G  R    ++   I  ++VE+ R  P +V + F+Y ++  VLPI
Sbjct: 25  ISLSGLLGGFVIGLLAGTCRALGGRITKTISLIFVELIRGTPIMVQVMFIYFALPMVLPI 84


>gi|302539849|ref|ZP_07292191.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302457467|gb|EFL20560.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces himastatinicus ATCC 53653]
          Length = 330

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ + AA+ AE+VR G+++V  GQ +AA ALGL   +  R +++PQAMRSI+P   + 
Sbjct: 181 IGLTLHEAAYAAEVVRGGILSVDSGQTQAAQALGLGRWRTLRRIVVPQAMRSIVPTAGNM 240

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA---LFMNR 387
            +  LK +S+   +   DL+     + NQT Q I ++++    Y++++ +++    ++ R
Sbjct: 241 LIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLLMVATLWYIAVTTVLSAGQFYVER 300

Query: 388 LNAKIALK 395
             A+ A +
Sbjct: 301 HYARGAAR 308


>gi|223985124|ref|ZP_03635220.1| hypothetical protein HOLDEFILI_02526 [Holdemania filiformis DSM
           12042]
 gi|223962946|gb|EEF67362.1| hypothetical protein HOLDEFILI_02526 [Holdemania filiformis DSM
           12042]
          Length = 219

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I  S  T A+ AE +R+ + +VPRGQ+EA    GLT+ +  R ++LPQAMR+   
Sbjct: 90  FPSAVIVFSVNTGAYAAETIRAAIESVPRGQLEAGYCAGLTYAQTMRRIILPQAMRTAFA 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++  ++L+K++SLA  +   ++      I  +T +   +      IYL    ++    
Sbjct: 150 PLSNSLISLVKDTSLAANITILEMFMASQRIAARTYEPFALYCEVGLIYLLFCTVLTALQ 209

Query: 386 NRLNAKI 392
            RL  K+
Sbjct: 210 RRLETKM 216


>gi|295099959|emb|CBK89048.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium cylindroides T2-87]
          Length = 242

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 15/178 (8%)

Query: 223 YISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           +I++F I+   G P +V     Y L   +PVL    F+ G           + +S  T A
Sbjct: 69  WITSFYIWVFRGTPMMVQAMFVYYLL--RPVLQWTPFVAG----------LVIISINTGA 116

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AEI+R+G+ +V  GQ EAA +LG+T  +    ++ PQA+++  P + +Q +  +K+SS
Sbjct: 117 YMAEIIRAGIQSVDNGQNEAAKSLGMTTIQTLIFIVFPQAIKNTFPSIGNQLIVNIKDSS 176

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +G  +L     ++     Q IE  L+   IYL L+ + +  +N L  ++  + K
Sbjct: 177 MLNVIGVTELYFQTTSVAGSNYQYIETFLVSALIYLVLTTLASFLLNFLEGRLDEERK 234


>gi|289550425|ref|YP_003471329.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus lugdunensis HKU09-01]
 gi|289179957|gb|ADC87202.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus lugdunensis HKU09-01]
          Length = 485

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 61/85 (71%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   IAL   ++A+IAEI+R+G+ AV +GQ EAA  LGL + +  + V++PQA+++I+P
Sbjct: 355 FICGIIALIINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYNQTMKNVIMPQAIKNILP 414

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            L ++++ L+K SS+   +G ++++
Sbjct: 415 ALGNEFVTLIKESSIVSTIGVSEVM 439



 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y +  + G VNT  L+  G+I   ++GTL+   +LS  K+++WI   Y+E+ R  P L
Sbjct: 275 TKYGSFFVKGIVNTIILSAIGVIIGAVLGTLIALAKLSKIKIISWIAAAYIEIIRGTPLL 334

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 335 VQVFIVF 341


>gi|257784235|ref|YP_003179452.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
 gi|257472742|gb|ACV50861.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
          Length = 449

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 98/183 (53%), Gaps = 20/183 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIAL 273
           +AL ++YI+  L+ G P  + I   Y L F  P+L      N +G           +I +
Sbjct: 264 RALAVVYIN--LLRGTPFFLQI---YILFFGLPMLNINLDTNLLG-----------FIVV 307

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  ++A+++EI R+G+ ++P+GQ EAA +LG+   +    +++PQ +R +IPPLTS ++ 
Sbjct: 308 AINSSAYLSEIFRAGIQSIPQGQYEAASSLGMNRFQTMTFIIIPQTIRRVIPPLTSDFIT 367

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             K++SL  +VG  +L+     +   TG     +   +F YL++++ +   +  +  ++ 
Sbjct: 368 SYKDTSLLSSVGVMELMMFAKNLTTSTGNMTPYMTAALF-YLAITLPLIKVVGSIEKRME 426

Query: 394 LKE 396
             E
Sbjct: 427 QSE 429


>gi|239834625|ref|ZP_04682953.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822688|gb|EEQ94257.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 223

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 7/138 (5%)

Query: 247 DKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           + P L Q  F F G    G T+S E  ++ +A++   AA+ AEIVR G+ ++  GQ+EA 
Sbjct: 67  NTPFLVQLFFIFFGMPSLGVTLSAEQAAI-LAMTLNCAAYAAEIVRGGVESIKAGQIEAG 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL      R ++   A+R++ P L SQ++ ++ NSSL  ++   +L  VG  I ++T
Sbjct: 126 KALGLHTFDIYRFIIFRPAIRAVYPALCSQFILMMLNSSLVASISAEELTYVGQMIDSET 185

Query: 361 GQAIEIILIWMFIYLSLS 378
            ++ EI  +   IYL+LS
Sbjct: 186 FRSFEIYFVLGVIYLALS 203


>gi|226313903|ref|YP_002773799.1| L-cystine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226096853|dbj|BAH45295.1| L-cystine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 231

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 18/205 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F +G++L++  T L+R    K    +   Y+S  +I G P LV +   + + +  
Sbjct: 38  IAIAAFFIGLILAVL-TALARLSGIKPLIGIARFYVS--IIRGTPLLVQL---FIIFYGL 91

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P +G         + P   S  I  S    A+ +E+VR+ ++++ +GQ EAA +LG+T+ 
Sbjct: 92  PSIGLM-------IDP-IPSAIIGFSLSVGAYSSEVVRAAILSIQKGQWEAAYSLGMTYW 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI---- 364
           +A R V+LPQA R  IPPL++ +++L+K++SLA  V   ++      ++  T + +    
Sbjct: 144 QALRRVVLPQAARVSIPPLSNSFISLVKDTSLASVVLVPEMFRKAQEVVAATYEPLLVYA 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
           E  LI+  I   LSI+     N+L+
Sbjct: 204 EAALIYWVICFVLSIIQDRIENKLD 228


>gi|238798540|ref|ZP_04642018.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
 gi|238717627|gb|EEQ09465.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
          Length = 220

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 18/176 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F +G+V+ L  +  SR      G+    +YIS F   G P L  + L + L  +   
Sbjct: 32  VAGFFIGVVIYLMESGRSR-----LGRGFARVYISLFR--GTPVLAQVLLCFYLPGE--- 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +G S   P +++  +AL+  TAA+ ++I+RSG  A+P GQ+EAA   GL+ R+ 
Sbjct: 82  ------LGLSL--PGYLAAVLALTLNTAAYQSQILRSGFEAIPPGQLEAAAMCGLSSRQT 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              + +PQ +R  +P L S+ ++++K S++   +   DL+ VG  + + T + +E+
Sbjct: 134 LWHIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 189


>gi|313622667|gb|EFR93034.1| L-cystine transport system permease protein TcyM [Listeria innocua
           FSL J1-023]
          Length = 236

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I+L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 32  LFGFIIAILLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 81

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 82  IVDFLSKSFDLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSMGY 141

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA  + +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 142 THGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 201

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 202 AFIGAALIYWFLTILIEAINYILEKNIA 229


>gi|290473278|ref|YP_003466144.1| putative high-affinity glutamine ABC transporter membrane protein
           [Xenorhabdus bovienii SS-2004]
 gi|289172577|emb|CBJ79346.1| putative high-affinity glutamine transport protein (ABC
           superfamily, membrane) [Xenorhabdus bovienii SS-2004]
          Length = 249

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+  T+A++A  V++G++A+  GQ  A ++LG    +    ++LPQA+R +
Sbjct: 94  PEITTVVCALALITSAYLAHGVKAGILAIGEGQWRAGLSLGFNRWEVLWYIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG A+L  +   + N++    +E+ L    +Y  + + + 
Sbjct: 154 VPSFINQWIALIKDTSLAYIVGVAELSFLATQVNNRSMVYPMEVFLFVALVYFVMCLSLE 213

Query: 383 LFMNRLNAKIALKEKK 398
           L  N +  + +++ ++
Sbjct: 214 LIANSVARRFSMQRQR 229


>gi|239834033|ref|ZP_04682361.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822096|gb|EEQ93665.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 218

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P +++  IAL+ + +AF+ EI R  + AVP GQ EAA ALGL +    R V+LPQ
Sbjct: 80  GLGINP-WIAATIALTLHASAFLGEIWRGCIDAVPPGQREAATALGLRYYNRMRYVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  + P     + L+K +SLA  +GF +L   G  I N T     +      IY  L 
Sbjct: 139 AARISVAPTVGFLVQLIKGTSLAAIIGFTELTRQGQIINNATFSPFMVFGTVAAIYFVLC 198

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +++   R+ A+ +    +
Sbjct: 199 WPLSILARRMEARFSRATAR 218


>gi|170724280|ref|YP_001751968.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169762283|gb|ACA75599.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 273

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 72/119 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ  AA+ALG+        + LPQAMR+IIPP  +Q
Sbjct: 146 IALSLNYGAYLSEIFRAGIIGVAVGQRHAALALGMRPVAIFWHITLPQAMRTIIPPSANQ 205

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + +E++     IY  LSI++ L   RL 
Sbjct: 206 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELAQARLE 264


>gi|119717235|ref|YP_924200.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardioides sp. JS614]
 gi|119537896|gb|ABL82513.1| amino acid ABC transporter membrane protein, PAAT family
           [Nocardioides sp. JS614]
          Length = 264

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 29/216 (13%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---ALKYQL 244
           K  V +F  GI L+L    L R    +  + L  +YI  F   GLP LV+I   AL   L
Sbjct: 63  KYTVIAFAGGIALALVLA-LMRLSPLRLYRWLATIYIEFFR--GLPALVVIIFMALGVPL 119

Query: 245 HFD--KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            F    P         G T+    M+L +     + A++AE +R+G+ AVP+GQ EAA +
Sbjct: 120 AFGWTPP---------GGTIGAGLMALIMV----SGAYMAETLRAGIQAVPKGQREAAQS 166

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGT-II 357
           LG+        V+LPQA+R +IPPLT++++ L+K++SL   VG      +L S G   +I
Sbjct: 167 LGMGGFWTMVTVVLPQAVRIVIPPLTNEFILLVKDTSLLYVVGMQYDQVELTSFGQQGLI 226

Query: 358 NQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           N +  +  + I L+++ I +  S ++A F+ R   K
Sbjct: 227 NYSNASPLLAIALVYLVISIPASQLVA-FLERRQQK 261



 Score = 39.7 bits (91), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 6/63 (9%)

Query: 89  ILVGFVNTFW---LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           IL+G  NT     +AF+G I   ++  L+   RLS  +L  W+  +Y+E FR +P LVVI
Sbjct: 54  ILIGAKNTVKYTVIAFAGGIALALVLALM---RLSPLRLYRWLATIYIEFFRGLPALVVI 110

Query: 146 FFL 148
            F+
Sbjct: 111 IFM 113


>gi|170017622|ref|YP_001728541.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
 gi|169804479|gb|ACA83097.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
          Length = 213

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 74/129 (57%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IA      A++AEI R GL AVPRGQ +AA  LGL   +    ++LPQ ++ +
Sbjct: 82  PRFEAAAIAFIINYGAYLAEIFRGGLQAVPRGQYDAAKVLGLNKVQTFFKIILPQVIKIV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   ++ +NL+K++SL   +G  D++  G    ++    +  +L+ M IYL ++ ++ +
Sbjct: 142 VPSFGNEIINLVKDTSLVYVIGLGDILRAGNIAASRDVTLVPYLLVGM-IYLLMTAIVTV 200

Query: 384 FMNRLNAKI 392
            + +  +++
Sbjct: 201 LLKQSESRL 209


>gi|187478360|ref|YP_786384.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422946|emb|CAJ49475.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 217

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+++V RGQ E +  LG+++ +  R ++LPQ ++ +
Sbjct: 85  PDFPAAIVAFALNYAAYFAEIFRAGILSVDRGQYEGSKVLGMSYLQTMRRIVLPQMVQRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLLMTLVLTW 203

Query: 384 FMNRLNAKIALKEK 397
           F   L  + A  ++
Sbjct: 204 FFQHLEKRYAKYDE 217


>gi|222081156|ref|YP_002540519.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725835|gb|ACM28924.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 219

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 79/137 (57%), Gaps = 1/137 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  ++P  ++ +I L+ Y A+F +EI+R G+++V  GQ +A  A+G+   +  R V++
Sbjct: 83  LSGIELTPA-VAAFITLTLYGASFYSEIIRGGIVSVDAGQWDAGRAIGMRRHQLMRRVIM 141

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R ++PPL +Q +  LKN+SL   +   DL+  G  I + + + +E   +   IY  
Sbjct: 142 PQALRRMLPPLVNQSVLQLKNTSLLSVLAVPDLLYQGQLITSASYRPLETYTMIAVIYFI 201

Query: 377 LSIMIALFMNRLNAKIA 393
           +   +    + L A++A
Sbjct: 202 ILFPLTRLAHGLEARMA 218


>gi|186477119|ref|YP_001858589.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193578|gb|ACC71543.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 218

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 123/239 (51%), Gaps = 30/239 (12%)

Query: 169 MFLNNRGLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           MFL N     P L      T++  A  FV S +LG+VL+L   ++SR+    T       
Sbjct: 1   MFLQNAIDFLPILLKGAVITIEITACAFVLSSILGLVLALL--KVSRNRAAST------- 51

Query: 223 YISTF--LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           + ST   LI GLP +V +   + ++F  P LG Q +          F +  I L    +A
Sbjct: 52  FGSTVINLIRGLPIIVQL---FYIYFVLPDLGVQLS---------AFQAGVIGLGIAYSA 99

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AE  R+G+ A+  GQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS
Sbjct: 100 YQAENFRAGIEAIDHGQIEAAHAIGMRGPLIMRRVVLPQAFRIALPPYGNTLVMLLKDSS 159

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +A  +  A++   G  I + T Q + +  +   +YL LS+ +   +N++  ++AL++ +
Sbjct: 160 VASTITVAEITRAGQLIASSTFQNMTVYTLVALLYLVLSLPLMFGVNQIGKRLALRKSR 218


>gi|312882237|ref|ZP_07741983.1| ABC amino acid transporter permease component [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370081|gb|EFP97587.1| ABC amino acid transporter permease component [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 223

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 97/172 (56%), Gaps = 14/172 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS F   G P LV + L   L++  P +  F F+ G      F +  I L+ + AA++
Sbjct: 57  LYISFFR--GTPLLVQLFL---LYYGLPQI--FPFLVGLNA---FSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A + V+LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRSQMEASLSIGMTKLQAMKRVILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN----RLN 389
             +G A++++      + + +  E  L    IY  + +++    N    RLN
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVLLTQIQNWAEYRLN 218


>gi|34498437|ref|NP_902652.1| amino-acid transport system permease ABC transporter protein
           [Chromobacterium violaceum ATCC 12472]
 gi|34104291|gb|AAQ60650.1| probable amino-acid transport system permease ABC transporter
           protein [Chromobacterium violaceum ATCC 12472]
          Length = 226

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 66/113 (58%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +E++R+ + +VPR Q EAA +LG++  +A R  +LPQA R  +PPL + +++L+K++
Sbjct: 102 AYTSEVIRAAISSVPRAQWEAAYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKDT 161

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  +   ++      I   T + + + L    IYL LS ++     RL  +
Sbjct: 162 SLAAVLTVPEMFQAAQRIAATTYEPLLLYLETALIYLLLSTVLTWLQERLEKR 214


>gi|296159866|ref|ZP_06842687.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295889849|gb|EFG69646.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 248

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 24/163 (14%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP+L        +H D                 E  +  +A++    A+  EIVR
Sbjct: 75  FVFFGLPSL-------GIHID-----------------EVQAAILAMTVNLGAYAIEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ++AA ALGL  R+  R V+LPQA+ ++ P L SQ L ++  S++   +  
Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYVVLPQAIANVFPALLSQVLIVMLGSAVVSQISV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            DL      I ++  ++ E  LI    YL LSI++   +NRL 
Sbjct: 171 PDLTYAANFIQSRNFRSFESYLIITATYLLLSIVLRQILNRLG 213


>gi|224823797|ref|ZP_03696906.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224604252|gb|EEG10426.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 219

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 26/229 (11%)

Query: 177 SFPTLTMDTNAKIF------VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + P L   T   +F      V   +LG V++L   R++R          PLL     ++ 
Sbjct: 10  ALPVLIKGTGYTVFFALSTMVLGLLLGFVVAL--VRIAR-----VPLLAPLLAFYVSVMR 62

Query: 231 GLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           G P LV I   + +++  P +G +F  +    +S         L+   AA+++E +R  +
Sbjct: 63  GTPLLVQI---FVIYYGLPSVGIEFEPVTAGVLS---------LTLNVAAYLSESLRGAI 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             V RGQ +AA +LGL   +A R V+ PQA+R  +P L +  ++L+K++SL   +  ++L
Sbjct: 111 AGVERGQWDAAQSLGLNWWQAMRFVVAPQALRLAVPSLANSLISLIKDTSLVSVITVSEL 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +     +I QT Q + + L+   IY +LS +      RL  ++A   ++
Sbjct: 171 MMATKDVIAQTFQPLPLYLMAAAIYWALSALFEQVQKRLELRLAHAYRR 219


>gi|260462071|ref|ZP_05810316.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259032318|gb|EEW33584.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 224

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 86/155 (55%), Gaps = 18/155 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G+V+SL      R +  K  + L + Y   F    LP LV++ L Y   +  P LG   
Sbjct: 41  IGLVISLL-----RLYAPKPLRWLAVGYTDIFR--ALPVLVVLILIY---YALPFLG--- 87

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            I  S+ +    +  I +S Y+A    E+ RSG+ ++PRGQ EA+ ALGL      R V+
Sbjct: 88  -IRLSSWASAVTAFAIIMSAYSA----EVFRSGIESIPRGQFEASQALGLPFLLTLRKVV 142

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           LPQA+R +IPP+TS  +++ K++SLA  V   +L+
Sbjct: 143 LPQAIRVVIPPMTSNCVSMFKDTSLASTVALPELL 177



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           +S   A+L GF+NT  L    +     IG ++   RL A K + W+   Y ++FR +P L
Sbjct: 14  ASSLPALLRGFLNTLLLGILSIGIGIPIGLVISLLRLYAPKPLRWLAVGYTDIFRALPVL 73

Query: 143 VVIFFLY 149
           VV+  +Y
Sbjct: 74  VVLILIY 80


>gi|290580620|ref|YP_003485012.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254997519|dbj|BAH88120.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 230

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 57/82 (69%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA I+E+ +S  +AVP+GQ+EA +++GLT  +  R +LLPQ  +  +P +T+  LNL+K+
Sbjct: 109 AASISEVFKSAYLAVPKGQLEAGLSIGLTGFQTFRRILLPQTFQIALPNITTAILNLMKD 168

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           ++LA  +G  D++  G  II++
Sbjct: 169 AALAYTIGLVDVMGAGNLIISR 190


>gi|222082422|ref|YP_002541787.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727101|gb|ACM30190.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 592

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 79/133 (59%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + ++ L+   +AF AEIVR G+++V +GQ+EAA ALGL+ R+    ++LPQAMRSI+P
Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDQGQLEAASALGLSRRRQAFRIVLPQAMRSILP 225

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K++S+   +   +L      I  +  + I +++   +W  I +++  +  
Sbjct: 226 TGFNEIIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSIAQ 285

Query: 383 LFMNRLNAKIALK 395
            ++ R  +K A++
Sbjct: 286 YYIERYFSKGAVR 298


>gi|86147173|ref|ZP_01065489.1| amino acid ABC transproter, permease protein [Vibrio sp. MED222]
 gi|218708096|ref|YP_002415717.1| putative amino-acid ABC transporter permease PatM [Vibrio
           splendidus LGP32]
 gi|85835057|gb|EAQ53199.1| amino acid ABC transproter, permease protein [Vibrio sp. MED222]
 gi|218321115|emb|CAV17065.1| Probable amino-acid ABC transporter permease protein patM [Vibrio
           splendidus LGP32]
          Length = 223

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 96/169 (56%), Gaps = 11/169 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           + T  ++  +     ++LSL    + R F       L  LYIS F   G P LV + L  
Sbjct: 19  LGTTMEMATWGLFFALILSLILANI-RVFKIPVLDQLSQLYISFFR--GTPLLVQLFL-- 73

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L++  P +  F ++ G      F +  I L+ + AA++AE +R+ +I + R QMEA+++
Sbjct: 74  -LYYGLPQV--FPWMVGLDA---FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLS 127

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +G+T  +A R V+LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 128 VGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|295704150|ref|YP_003597225.1| sulfur-containing amino acid ABC transporter permease TcyL
           [Bacillus megaterium DSM 319]
 gi|294801809|gb|ADF38875.1| sulfur-containing amino acid ABC transporter, permease protein TcyL
           [Bacillus megaterium DSM 319]
          Length = 232

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + S V+G  L LF   L R +       +  +YIS   + G P L+ + L +   +  
Sbjct: 27  ILIASLVIGSTLGLFIA-LPRIYKVPVLSQIAAVYIS--FMRGTPILIQLFLVF---YGI 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L Q   I  S ++P  + + I  S  TAA  +E++R  + +V +GQ EAA ++G++ +
Sbjct: 81  PALLQLIHIDVSRMAP-LVFVIITYSLSTAASFSEMMRGAINSVDKGQTEAAYSIGMSGK 139

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA     P   +  +  LK++SLA  +G  D++  G TII  T  A+E+ +
Sbjct: 140 QTFTRIVLPQAFVVAFPNFGNLVIGSLKDTSLAFTIGVMDMMGRGDTIIAATAHAVEVYI 199

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               IY  ++I++  F  +   K+   ++
Sbjct: 200 ALAIIYYLVAIILEKFFVKSEQKLQKHDQ 228


>gi|190895141|ref|YP_001985434.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700802|gb|ACE94884.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 216

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 68/123 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ +++AF+ EI R G+ AVP GQ EAA ALGL +R     V+LPQA +  +P     
Sbjct: 91  IGLTAHSSAFLGEIWRGGIEAVPLGQTEAARALGLPYRHRMLDVVLPQAFKISLPATIGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K +SL   +GF +L   G  I N T Q + +  +   IY +L   ++L    L  
Sbjct: 151 LVGLVKGTSLVAIIGFTELTRAGQIISNNTFQPLIVFGMVGAIYFALCWPLSLLSGHLEK 210

Query: 391 KIA 393
           +++
Sbjct: 211 RMS 213


>gi|330469203|ref|YP_004406946.1| polar amino acid ABC transporter inner membrane subunit
           [Verrucosispora maris AB-18-032]
 gi|328812174|gb|AEB46346.1| polar amino acid abc transporter, inner membrane subunit
           [Verrucosispora maris AB-18-032]
          Length = 326

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 77/133 (57%), Gaps = 11/133 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF---------IGGSTVSPEFM 267
           +A+P L ++  ++FG   L+   +++ L FD+ +   F                +   F+
Sbjct: 112 RAVPRLVLA--ILFGNLGLLWSRIEFGLPFDRQIGALFGVQDFQARLFGFSARDLLTGFV 169

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +AL    AA++AEIVR+G+ +V  GQ EAA ALG+T  +  R ++LPQAMR I+PP 
Sbjct: 170 AGMLALGLSEAAYMAEIVRAGIQSVDEGQTEAAQALGMTQGQILRRIVLPQAMRVIVPPT 229

Query: 328 TSQYLNLLKNSSL 340
            ++ + +LK++SL
Sbjct: 230 GNETIAMLKDTSL 242


>gi|309806886|ref|ZP_07700873.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 03V1-b]
 gi|308166752|gb|EFO68944.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 03V1-b]
          Length = 244

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 30/175 (17%)

Query: 191 VFSFVLGIVLSL---FATRLSRH---FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + SF+LG+ L +      ++  H   F     + LPLL I  F  FGLP           
Sbjct: 32  ILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPLLLIIFFAYFGLP----------- 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                   Q   +   T +       IAL  +  A +AEIVRSG+ AV +GQ+E A++ G
Sbjct: 81  --------QLGIVTNVTCAA-----IIALVVFEGAMLAEIVRSGIGAVNKGQLEGALSNG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +T+ +A   V++PQA+  +IP + SQ+++L+K++SLA  +   +L+     I +Q
Sbjct: 128 MTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIYSQ 182


>gi|162447510|ref|YP_001620642.1| ABC transporter permease [Acholeplasma laidlawii PG-8A]
 gi|161985617|gb|ABX81266.1| ABC-type transport system, permease component [Acholeplasma
           laidlawii PG-8A]
          Length = 225

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 97/171 (56%), Gaps = 6/171 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV + L Y +    PV+       G+     F+   +AL   ++A+ +E  R+
Sbjct: 61  IIRGTPLLVQVMLIYAI-VKLPVMTVLGMDFGA-----FLLGMVALIINSSAYASETFRA 114

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++++ +GQ EA ++LG+T +     +++PQA+++I+P L ++++ L+K +S+ + +G +
Sbjct: 115 GILSIEKGQKEAGLSLGMTEKSTMLHIIMPQAIKNIMPSLGNEFVTLIKETSIFMYLGIS 174

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+     +   T +  E+ ++   +Y  L+   +  M++L  ++  +++K
Sbjct: 175 ELMYSAQIVKTSTYRTKEVYIVTALLYFVLTFTTSKLMSKLEKRMRKQDEK 225



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 5/91 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D  Y   +L G + T  LA   ++  T+I  +    RLS +K++ +I   YVE+ R  P 
Sbjct: 8   DLFYVKTLLQGVLITIVLALIAVLMGTLIAVIPTYFRLSKHKILNFIGGSYVEIIRGTPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV-LPFGMFL 171
           LV +  +Y    +++ +P  +++ + FG FL
Sbjct: 68  LVQVMLIY----AIVKLPVMTVLGMDFGAFL 94


>gi|121608290|ref|YP_996097.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552930|gb|ABM57079.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 512

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 7/167 (4%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL+   Y L        Q     G  +S  F +   AL     AFIAEI R G++ 
Sbjct: 67  LPLLVLLVFTYNLP-------QVFPASGVLLSDPFYAGLTALVVSETAFIAEIHRGGILG 119

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ+EA  ALG+      R++++PQA+R  +P L+++++ + K +SL   +  A+++ 
Sbjct: 120 VPPGQIEAGRALGIGRAGIQRMIVIPQALRIALPALSNEFITIAKMTSLVSVISLAEILL 179

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG  +  Q     E +L   F Y+ +  +    +  L A + +  +K
Sbjct: 180 VGQRLYTQNFLVFETMLAVAFYYVLIVTVFDKLLGALEAHMNILRRK 226


>gi|294084019|ref|YP_003550776.1| amino acid ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663591|gb|ADE38692.1| ABC-type amino acid transport system, permease component
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 379

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 82/134 (61%), Gaps = 7/134 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A++AE++R GL  +P+GQ+EAA A GLT+ K T L+++PQ ++  IP + + 
Sbjct: 246 IMVTFFASAYMAEVIRGGLAGIPKGQIEAAQASGLTYWKTTYLIVMPQVLKISIPGIVNT 305

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEI-ILIWMFIYL---SLSIMIAL 383
           ++ L K+++L + +G  D++ +G + +   N  G A E+ I + +F ++    +S   A 
Sbjct: 306 FIGLFKDTTLVLIIGMFDVLGMGRSSLADPNWNGLAREVYIFVAIFFFICCYGMSYYSAY 365

Query: 384 FMNRLNAKIALKEK 397
              +L+ +   ++K
Sbjct: 366 LERKLDTENKFQKK 379


>gi|75761726|ref|ZP_00741667.1| Cystine transport system permease protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74490780|gb|EAO54055.1| Cystine transport system permease protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 234

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 35  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 89  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 141 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 177



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 49  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 89


>gi|227552460|ref|ZP_03982509.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|227178406|gb|EEI59378.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
          Length = 237

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 110/221 (49%), Gaps = 41/221 (18%)

Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHFHEKT---------GKALPLLYISTFLIFG 231
           T  K+F+F+ +    LGI+L+L    LS HF              +  PLL    F+ +G
Sbjct: 41  TTLKLFLFTLIGSLPLGIILAL---GLSLHFKPLRYFLQTYVWIMRGTPLLLQLIFVFYG 97

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LPT+ ++       FD+                 F +  IA     AA+ AEI R G+ +
Sbjct: 98  LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 133

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +G  D++ 
Sbjct: 134 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 193

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G   + +    + ++ + + IYL+L+ ++ + M ++  K+
Sbjct: 194 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 233


>gi|110598078|ref|ZP_01386357.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM
           13031]
 gi|110340337|gb|EAT58831.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM
           13031]
          Length = 476

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 13/179 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL  +YI  F   G P LV +     L+F  PV+G           P +++  + L   
Sbjct: 300 RALCTVYIEFFR--GTPVLVQLLF---LYFGLPVIG--------ITLPGWLTAIVGLGLN 346

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ +++ R+   A+P  Q + A +LG+    A R ++ PQA R  +PP+T+ ++ L K
Sbjct: 347 YAAYESQVYRTAFQAIPERQWQVAYSLGMHPLLAFRRIIFPQAFRIALPPMTNDFVALFK 406

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++S A A+   +L +    + N T   + I L+    YL++S+ +A + ++L  K+  K
Sbjct: 407 DTSTAFAIAVWELATAYRELANATQSYLGIGLVVCCYYLAMSLPLAHYAHKLEQKLQRK 465



 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  LAF  MI A I+G  +  G+ +   L   +C VY+E FR  P LV + FLY
Sbjct: 270 TVLLAFGAMIIAVILGIPLAVGQSNGGPLTRALCTVYIEFFRGTPVLVQLLFLY 323


>gi|86360206|ref|YP_472095.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284308|gb|ABC93368.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 229

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 69/119 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A GL+  K TR + LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +L+    YL+L+ +IA  +  L A++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVLRGLEAQVPVRR 229


>gi|27383229|ref|NP_774758.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27356403|dbj|BAC53383.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 220

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 17/204 (8%)

Query: 195 VLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           VLG+V  LF     LSR    K  + + L +I  F      T +L+ L +  ++  P+L 
Sbjct: 32  VLGLVFGLFGAFGSLSRL---KAVRLVALTFIEAFRC----TPILVQLIW-FYYALPILA 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                 G  ++P   S  +ALS Y  +F +EI+R G++++ +GQ EA  ALG+T  +A R
Sbjct: 84  ------GVEMTPITASA-LALSLYGGSFYSEIIRGGIVSIDKGQSEAGAALGMTPGQAMR 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA++ +IP L +Q +   KN+SL   +   DLV       + + + +E       
Sbjct: 137 RIVLPQAIKRMIPALMNQSIIQFKNTSLVSVLAVPDLVYQSQVAAHDSYRPLETYTAVAV 196

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
            Y ++ I + + + R   ++A+ E
Sbjct: 197 AYAAILIPLTIIVRRGEKRLAVGE 220


>gi|289647160|ref|ZP_06478503.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 324

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 15/199 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 96  VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148

Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VLG       F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 149 IVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268

Query: 363 AIEIILIWMFIYLSLSIMI 381
            I ++++    YL +++++
Sbjct: 269 VIPLLIVATVWYLIITMLL 287


>gi|229078176|ref|ZP_04210751.1| Amino acid ABC transporter [Bacillus cereus Rock4-2]
 gi|228705122|gb|EEL57533.1| Amino acid ABC transporter [Bacillus cereus Rock4-2]
          Length = 207

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 8   TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 62  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 22  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62


>gi|157692904|ref|YP_001487366.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032]
 gi|157681662|gb|ABV62806.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus SAFR-032]
          Length = 230

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 29/164 (17%)

Query: 193 SFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            F+LGI+L+L    + +       F+    +  PL+     + FGLP L    L +Q+  
Sbjct: 44  GFILGILLTLCKISVFKPLIWLADFYTSIFRGTPLVLQLLIIYFGLPQL----LGFQID- 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                             ++ +   A +  +AA+++EI+R+G+ A+ +GQ EAA+ALG+ 
Sbjct: 99  ------------------QYWAAVAAFTLNSAAYVSEIIRAGINAIDKGQKEAAVALGIP 140

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           + K  + +LLPQA ++I P L ++ + L K S++   +G  D++
Sbjct: 141 YAKMMKDLLLPQAFKNISPALVNETITLTKESAIVTVIGLGDVM 184


>gi|187777535|ref|ZP_02994008.1| hypothetical protein CLOSPO_01126 [Clostridium sporogenes ATCC
           15579]
 gi|187774463|gb|EDU38265.1| hypothetical protein CLOSPO_01126 [Clostridium sporogenes ATCC
           15579]
          Length = 213

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+
Sbjct: 98  GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+L  A+G  D++     ++ +    I    I   IYL ++  + +    L  K A
Sbjct: 158 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVIIFRTLEKKYA 212


>gi|32490938|ref|NP_871192.1| hypothetical protein WGLp189 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166144|dbj|BAC24335.1| gltJ [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 240

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 65/111 (58%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           +LS +++ ++ E +++GL A+ +GQ +AA + G       + +L+PQ +++   P+  QY
Sbjct: 121 SLSIFSSVYLVEELQTGLNAISKGQKDAAKSQGFKKWYIYKKILIPQGIKNAWQPMIGQY 180

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           LNLLK SSL  A+GF +L      I +    AIE   +  F+YL L  +I+
Sbjct: 181 LNLLKLSSLTSAIGFGELTYSINQIESYNAHAIEAFAVGTFLYLILGYLIS 231


>gi|319794877|ref|YP_004156517.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315597340|gb|ADU38406.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 217

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AF+ EI R  + ++P+GQ EA+ +L L+  +  R V+LPQA++  I P    
Sbjct: 91  VALTLYTSAFLTEIWRGCVASIPKGQWEASGSLALSFGEQMRHVILPQAVKIAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K ++LA  +GF +L   G  I N T Q   +      +Y  L   ++L+   L  
Sbjct: 151 LVQVIKGTALASVIGFVELTKAGSMISNATFQPFVVFSCVALLYFVLCFPVSLYAKNLER 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|218457946|ref|ZP_03498037.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Kim 5]
          Length = 161

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 59/95 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ EI R  + AVP+GQ EAA ALGL +    R V+LPQA++  +P
Sbjct: 30  WLAVAIAFTLHASAFLGEIWRGSIEAVPKGQSEAANALGLHYVSRMRDVILPQALKISMP 89

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
                 + L+K +SLA  VGF +L   G  I NQT
Sbjct: 90  ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQT 124


>gi|15835024|ref|NP_296783.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           Nigg]
 gi|270285190|ref|ZP_06194584.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           Nigg]
 gi|270289209|ref|ZP_06195511.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           Weiss]
 gi|301336586|ref|ZP_07224788.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           MopnTet14]
 gi|7190447|gb|AAF39262.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           Nigg]
          Length = 214

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 14/200 (7%)

Query: 193 SFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           S V G VL     T  SR+F  +  K L   Y+    + G P  + I + Y   F  P L
Sbjct: 25  SLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMA--VRGTPLFIQILIVY---FGLPSL 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            + N      +SP    L IAL+  +AA+++E VR G+ A+P  Q EAA  LG    +  
Sbjct: 80  IKVN------LSPLVAGL-IALTFNSAAYLSENVRGGINAIPIQQWEAAKVLGYKASQIF 132

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             +L PQ  ++I+P LT+++++L+K SS+ + VG  +L  V   I+ +    +E+ LI  
Sbjct: 133 WHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPMEMYLICA 192

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            +YL ++   + F  RL+ K
Sbjct: 193 GLYLVMTSAFSYFA-RLSEK 211


>gi|289626489|ref|ZP_06459443.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|330868339|gb|EGH03048.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 0893_23]
          Length = 324

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 101/199 (50%), Gaps = 15/199 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 96  VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148

Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VLG       F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 149 IVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268

Query: 363 AIEIILIWMFIYLSLSIMI 381
            I ++++    YL +++++
Sbjct: 269 VIPLLIVATVWYLIITMLL 287


>gi|145593976|ref|YP_001158273.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora tropica CNB-440]
 gi|145303313|gb|ABP53895.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora tropica CNB-440]
          Length = 235

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 17/192 (8%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLG-QFNFIGGSTVSPEFMSL 269
           +  T + LPL  +  F  FGLP     AL     F + P L   F+ +G  T  P F   
Sbjct: 54  YVNTFRNLPLTIVMFFAAFGLP-----ALGSNADFLRIPGLDLVFSRLG--TDLPYFRFA 106

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL  YT+AF+ E +RSG+ AVP GQ EAA +LGLT  +  R V+LPQ+  + + PL S
Sbjct: 107 LIALVLYTSAFVCEALRSGVNAVPAGQAEAARSLGLTFIQNLRHVVLPQSWTASVVPLGS 166

Query: 330 QYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALF 384
             + ++KNS+L   +GF     DL      + +  G+    + I + I YL +++ +   
Sbjct: 167 VIIAMIKNSAL---IGFFGVIGDLSQTADQLTSAGGEPFIPVAIGISIGYLIMTVPLGAL 223

Query: 385 MNRLNAKIALKE 396
           ++R+  + A+  
Sbjct: 224 LDRIERRQAVAR 235


>gi|20804071|emb|CAD31274.1| PUTATIVE AMINO-ACID ABC TRANSPORTER PERMEASE PROTEIN [Mesorhizobium
           loti R7A]
          Length = 293

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 13/181 (7%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           AL   Y S F   GLP L+ I   Y ++   P LG         V     S  +ALS   
Sbjct: 126 ALASFYTSFFR--GLPLLIQI---YLIYLGLPQLG--------IVINAVPSGILALSLCV 172

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ EI R+G+ ++ RGQ EA+ ++G       R ++LPQA+  IIPP+ + ++ +LK+
Sbjct: 173 GAYMTEIFRAGIQSIDRGQWEASRSIGFGFGLTIRKIILPQALPVIIPPMGNTFIAMLKD 232

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SSL   +G  +L  +  TI   T   +E+++    IY  LS  + +  +RL    A  + 
Sbjct: 233 SSLVSVLGVWELTFLARTIGQPTFHHMEMLITAAMIYWILSACLEVLQSRLEHHFARSKV 292

Query: 398 K 398
           +
Sbjct: 293 R 293


>gi|42779691|ref|NP_976938.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42735608|gb|AAS39546.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 217

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 70/120 (58%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS +    I EIVR  L ++P+GQ+EA  ++G+  ++  + VL+PQA+R +IP   + +
Sbjct: 96  ALSLWGITEIGEIVRGALQSLPKGQVEAGKSIGMNKKQLYQYVLIPQAIRRMIPATINIF 155

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +++ +SL V +G  +++  G  I+ +TG+A  I       Y  L   ++++  +L  +
Sbjct: 156 IRIIQTTSLTVLIGVTEVIKAGQQIVERTGEAFLIYGCLFIFYFLLCYPLSIWSRKLETR 215


>gi|229817229|ref|ZP_04447511.1| hypothetical protein BIFANG_02489 [Bifidobacterium angulatum DSM
           20098]
 gi|229785018|gb|EEP21132.1| hypothetical protein BIFANG_02489 [Bifidobacterium angulatum DSM
           20098]
          Length = 225

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 101/215 (46%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R     + +  K LPL  I  F++ G             
Sbjct: 29  LFSTILGVILVMMRISPIPSLRTVAGIYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T S  F  L +  LS YTAAF+ E +RSG+  VP GQ EAA AL
Sbjct: 76  -----AYAQLKLTFSDTFSTNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEAARAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361
           GL   +A   ++LPQ  R  + PL + ++ LLKNS++A A   A   S  +   I     
Sbjct: 131 GLNFTQAAVQIILPQTFRGSVAPLGNTFIALLKNSTVAAAASVATETSTMMSEMIEYHAD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           Q + I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 191 QIVLIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|148378448|ref|YP_001252989.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931220|ref|YP_001382837.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153935969|ref|YP_001386404.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. Hall]
 gi|148287932|emb|CAL81998.1| binding-protein-dependent transport system,membrane component
           [Clostridium botulinum A str. ATCC 3502]
 gi|152927264|gb|ABS32764.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152931883|gb|ABS37382.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. Hall]
          Length = 211

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R+G+ ++  GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+
Sbjct: 96  GAYLAETFRAGIESIDEGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+L  A+G  D++     ++ +    I    I   IYL ++  + L    L  K A
Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR-DFTITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210


>gi|307316994|ref|ZP_07596435.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306897082|gb|EFN27827.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 384

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 59/88 (67%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   I +S + +A++AE+VR GL A+P+GQ E A +LGL+  +    ++LPQA++ +I
Sbjct: 247 KFLRALIGVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSFWQKMGFIVLPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ L K++SL   +G  DL+ +
Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334


>gi|294498360|ref|YP_003562060.1| putative amino acid ABC transporter permease [Bacillus megaterium
           QM B1551]
 gi|294348297|gb|ADE68626.1| putative amino acid ABC transporter, permease protein [Bacillus
           megaterium QM B1551]
          Length = 233

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 100/179 (55%), Gaps = 21/179 (11%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL +  FL+ FGLP L+L+     +H D     +  F            L IA S 
Sbjct: 64  RCTPLL-VQLFLVYFGLPQLLLL-----VHIDINSWSRVTF------------LVIAFSL 105

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +TAA ++E++RS  +++ +GQ EAA ++G+ + ++ R ++LPQA  + +P L +  ++LL
Sbjct: 106 HTAAPLSEVIRSAYLSIDKGQFEAAYSIGMNYFQSLRRIILPQAFVAALPNLGNATISLL 165

Query: 336 KNSSLAVAVGFADLVSVGGTII-NQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K+++LA ++G  D++     I+ N  G  + EI +    +Y S+ I+I + ++ L   +
Sbjct: 166 KDTALAFSIGIIDIMGQVRLILGNNYGIGMFEIYVTISLVYWSMCIVIEIIVSYLEKHL 224


>gi|251791766|ref|YP_003006487.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540387|gb|ACT09008.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 252

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 95/184 (51%), Gaps = 10/184 (5%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   V S + G+  ++  T L        G A  LL +       +P ++
Sbjct: 17  TFPDGPLGGAALTLVLSLMAGLTSAVLGTVLGVALAMLRGWAGGLLALVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   Y   F  P++   +        PE  ++  AL+   +A++A  V++G++A+ RGQ
Sbjct: 77  LIFWTY---FLLPMVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVAIGRGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LGL   +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGMSLGLGRWQTLWYIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186

Query: 357 INQT 360
            N++
Sbjct: 187 NNRS 190


>gi|206968421|ref|ZP_03229377.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|218895897|ref|YP_002444308.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228899529|ref|ZP_04063785.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 4222]
 gi|228906601|ref|ZP_04070477.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 200]
 gi|228919695|ref|ZP_04083057.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228951348|ref|ZP_04113457.1| Amino acid ABC transporter [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229068525|ref|ZP_04201826.1| Amino acid ABC transporter [Bacillus cereus F65185]
 gi|229177391|ref|ZP_04304774.1| Amino acid ABC transporter [Bacillus cereus 172560W]
 gi|229189061|ref|ZP_04316089.1| Amino acid ABC transporter [Bacillus cereus ATCC 10876]
 gi|206737341|gb|EDZ54488.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|218542540|gb|ACK94934.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228594481|gb|EEK52272.1| Amino acid ABC transporter [Bacillus cereus ATCC 10876]
 gi|228606114|gb|EEK63552.1| Amino acid ABC transporter [Bacillus cereus 172560W]
 gi|228714667|gb|EEL66541.1| Amino acid ABC transporter [Bacillus cereus F65185]
 gi|228808285|gb|EEM54795.1| Amino acid ABC transporter [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228840049|gb|EEM85328.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228853150|gb|EEM97928.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 200]
 gi|228860119|gb|EEN04523.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 4222]
          Length = 209

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 10  TTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 64  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 24  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64


>gi|254500256|ref|ZP_05112407.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222436327|gb|EEE43006.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 241

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 4/140 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P F +  +AL+ YT+A+++E+ R  + +VP GQ E   ALGL   +   L++LPQA R
Sbjct: 96  VDPWFAA-GLALTLYTSAYLSEVWRGAITSVPLGQHEGGRALGLAFAQIMILIILPQAFR 154

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLS 378
             I P     + ++K +SLA  +GF DL+++G    N      +  +I+     IY SL 
Sbjct: 155 LAIAPTVGFMVQIIKGTSLAYIIGFHDLMAIGKRWANSPVPGTQPFVIYPMMAMIYFSLC 214

Query: 379 IMIALFMNRLNAKIALKEKK 398
             ++L+   L  ++     K
Sbjct: 215 YPLSLWARHLEKRLGSTSSK 234


>gi|2108227|gb|AAC45330.1| integral membrane protein-like protein [Lactobacillus reuteri]
          Length = 233

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 4/160 (2%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           TRLSR    + G  + L +I++F ++   +  L+   + + F  P L     +       
Sbjct: 41  TRLSR----QRGPFMILKWIASFYVWLFRSTPLLVQLFIVFFGLPYLRIKGILPHGIKLE 96

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  I  S  T A+ +E +R+ + +VPRGQ EA  A+G+T  +    ++LPQA+R  +
Sbjct: 97  PFTAGIITFSLNTGAYASETIRAAISSVPRGQWEAGAAIGMTRLQILWRIILPQALRVAL 156

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           PPL++ +++L+K++SLA ++   ++ +V   I  +  Q +
Sbjct: 157 PPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPL 196


>gi|15965229|ref|NP_385582.1| general L-amino acid transport permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307309252|ref|ZP_07588920.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15074409|emb|CAC46055.1| Probable general L-amino acid transport permease ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306900253|gb|EFN30870.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 384

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 59/88 (67%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   I +S + +A++AE+VR GL A+P+GQ E A +LGL+  +    ++LPQA++ +I
Sbjct: 247 KFLRALIGVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSFWQKMGFIVLPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ L K++SL   +G  DL+ +
Sbjct: 307 PGIVNTFIGLFKDTSLVSIIGMFDLLGI 334


>gi|256832815|ref|YP_003161542.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
 gi|256686346|gb|ACV09239.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
          Length = 313

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 60/84 (71%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +++ +AL+ Y  A IAE+VRSG+  +P GQ EAA+A+G+T  ++ R V LPQA+ +++P
Sbjct: 141 LVAVVVALTLYNGAVIAELVRSGVHGLPSGQREAALAVGMTRGQSIRSVELPQALLAMLP 200

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
            L SQ++ +LK+S+L   V + +L
Sbjct: 201 SLVSQFVVILKDSALGQIVTYPEL 224



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 17/123 (13%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R   ++  I+ ALL   + +W    ++N                 AG    +   P    
Sbjct: 16  RARIVAANIVGALLAVALLVWMGIQLHN-----------------AGQLRGELWAPLVEA 58

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S++   ++ G +NT   A   +  AT++GTL G GRL+ + +V W C + VE FR +P L
Sbjct: 59  SAWQNFLIPGLINTLVAAALSIAAATVLGTLFGVGRLANSVVVRWTCGIIVEFFRAVPVL 118

Query: 143 VVI 145
           +++
Sbjct: 119 IMM 121


>gi|288550479|ref|ZP_05970605.2| general amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315400|gb|EFC54338.1| general amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 323

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 61/96 (63%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L++ K   LV+
Sbjct: 177 FMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALSYWKTQGLVI 236

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 237 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 272


>gi|156933487|ref|YP_001437403.1| hypothetical protein ESA_01305 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531741|gb|ABU76567.1| hypothetical protein ESA_01305 [Cronobacter sakazakii ATCC BAA-894]
          Length = 222

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  VLG +L++   RLS  +        P+ +++ F I       LIA  + +++  P  
Sbjct: 32  FGLVLGFLLAMM--RLSPFW--------PVSWLARFYISIFRGTPLIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +PPL + +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPPLGNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E+ 
Sbjct: 194 LIYWVMATVLSALQNHFENQLNRQERD 220



 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G L+   RLS    V+W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFLLAMMRLSPFWPVSWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETL 107


>gi|15674455|ref|NP_268629.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes M1 GAS]
 gi|13621552|gb|AAK33350.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes M1 GAS]
          Length = 522

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ +AA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFKAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTV 491


>gi|17549154|ref|NP_522494.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17431405|emb|CAD18084.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 248

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 93/174 (53%), Gaps = 8/174 (4%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T L++G+  + L+ L   ++F  P+     FIG       F ++   L  Y   +++E
Sbjct: 63  VVTALVYGVRGVPLLMLILWVYFLVPL-----FIGRDVSG--FTTMLCTLVIYEGVYLSE 115

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR+G+ A+P+GQMEAA ALG ++  A R+V+LPQA+ +++P + +Q+++ +K ++L   
Sbjct: 116 VVRAGIEALPKGQMEAARALGHSYLGAMRVVILPQALYNMLPSMLAQFVSTIKETTLGYV 175

Query: 344 VGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +L      I N    +  +I  +   IY ++   +      L  +IA K 
Sbjct: 176 INVPELTFAANQINNALLSKPFQIFFLLAVIYFAVCWSLTRAARALEHRIAAKR 229


>gi|116493034|ref|YP_804769.1| ABC-type amino acid transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116103184|gb|ABJ68327.1| amino acid ABC transporter membrane protein, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 216

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 30/184 (16%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLI 229
           LS  ++T+       V S +LG+ L+L      + F           +  PLL    F+ 
Sbjct: 15  LSGASMTLQVFCWTIVGSLILGVFLALGLVSKFKPFQAIISAYVWLMRGTPLLLQLIFIF 74

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           +GLPT+                          V P + +  +A     AA+ AEI R GL
Sbjct: 75  YGLPTV------------------------GIVFPRYEAALLAFILNYAAYFAEIFRGGL 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V +GQ EA   L +T+ + T+ V+LPQ  + ++P + ++ +NL+K+SSL   +G  DL
Sbjct: 111 QSVDKGQYEAGRVLQMTYWQTTKKVILPQVAKIVLPSIGNEVINLVKDSSLVYVIGIGDL 170

Query: 350 VSVG 353
           +  G
Sbjct: 171 LRAG 174


>gi|310766168|gb|ADP11118.1| transport system permease protein [Erwinia sp. Ejp617]
          Length = 366

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ E A +L L + K  RLV+LPQA++ +IP L +  + L 
Sbjct: 240 FQSAYVAEVVRGGLQALPKGQYEGAESLALGYWKTQRLVILPQALKLVIPGLVNTIIALF 299

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 300 KDTSLVIIIGLFDLFS 315


>gi|258543562|ref|YP_003188995.1| amino acid ABC transporter permease [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634640|dbj|BAI00616.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637696|dbj|BAI03665.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640750|dbj|BAI06712.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643805|dbj|BAI09760.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646860|dbj|BAI12808.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649913|dbj|BAI15854.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652903|dbj|BAI18837.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655957|dbj|BAI21884.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 519

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 24/136 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP                         G +++P F++  ++L   
Sbjct: 360 RGTPLLIQVLFIFYGLPEF-----------------------GISLTP-FLAGVVSLGMN 395

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AE  R+GL +V  GQMEAA+AL +TH +A R V++PQA R ++P +T+ +++LLK
Sbjct: 396 YAAYEAENYRAGLQSVAHGQMEAALALNMTHAQALRYVVVPQAFRLVMPVMTNDFISLLK 455

Query: 337 NSSLAVAVGFADLVSV 352
           +SSL   +   +L   
Sbjct: 456 DSSLVSVITLTELTQT 471


>gi|225027102|ref|ZP_03716294.1| hypothetical protein EUBHAL_01358 [Eubacterium hallii DSM 3353]
 gi|224955566|gb|EEG36775.1| hypothetical protein EUBHAL_01358 [Eubacterium hallii DSM 3353]
          Length = 222

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 111/212 (52%), Gaps = 10/212 (4%)

Query: 178 FPTLT--MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +PTL   +    KI + S ++ +V+ +F   ++        + +   YI  +LI G P L
Sbjct: 11  YPTLLTGLTMTVKITILSLIIALVIGIFVCLMNIS-SNIVLRGIAKFYI--WLIRGTPML 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V     +  +F  P L Q    G       F +  + L+    A+I+EI R  + +V +G
Sbjct: 68  VQ---AFYFYFALPQLVQ-AVTGSQFRITVFTASLVTLALNAGAYISEIFRGSIESVNKG 123

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL++ K+ + ++LPQA+R  +P L +Q++  LK+S++  A+G ++++     
Sbjct: 124 QMEAARSLGLSYAKSMQKIILPQAVRICLPSLVNQFIITLKDSTILYAIGLSEVMYNAKI 183

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +T ++      W+ ++  L + +  F++R
Sbjct: 184 YVGRTMESFA-TYTWVAVFFLLIVTVLSFISR 214


>gi|148555537|ref|YP_001263119.1| polar amino acid ABC transporter inner membrane subunit
           [Sphingomonas wittichii RW1]
 gi|148500727|gb|ABQ68981.1| polar amino acid ABC transporter, inner membrane subunit
           [Sphingomonas wittichii RW1]
          Length = 362

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 56/89 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    ++A+IAE+VR GL  VP GQ E+A ALGL        ++LPQA+R  + PLTS 
Sbjct: 231 VAFVLSSSAYIAEVVRGGLQGVPPGQRESARALGLGRSTVLLSIILPQAIRKALAPLTST 290

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            + ++KNSSL + VG  DL+S G   +N 
Sbjct: 291 VVVIIKNSSLVLVVGLFDLLSAGRVSLND 319


>gi|116255277|ref|YP_771110.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259925|emb|CAK03019.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 222

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 71/121 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  EI+R G+ ++P+GQMEA +ALGL   +  RL++L  A+R+I P LTSQ
Sbjct: 95  IALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L   +S+A A+   +L SV   I +++ ++ E+       Y  +S ++     + +A
Sbjct: 155 FVLLTLTTSIASAISAYELTSVSQRIESESFRSFEVYFTVTVFYFVISWLMMRIFAQFSA 214

Query: 391 K 391
           +
Sbjct: 215 R 215



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 38/62 (61%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           ++L+G + TF LA  GM+ A +IG    A R SA K   W+   +VE+ RN P LV IFF
Sbjct: 16  SLLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPARWLVIAFVELIRNTPFLVQIFF 75

Query: 148 LY 149
           +Y
Sbjct: 76  IY 77


>gi|28377716|ref|NP_784608.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254555901|ref|YP_003062318.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300767695|ref|ZP_07077605.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308179878|ref|YP_003924006.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270549|emb|CAD63453.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254044828|gb|ACT61621.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300494680|gb|EFK29838.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308045369|gb|ADN97912.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 217

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 30/190 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPT 234
           +T++ +    + SF++G VL +      ++     G      + LPL+ I  F  FGLP 
Sbjct: 22  VTVEVSVVSIIASFIIGSVLGVLRYVKIKYLSAVVGFVVDIIRNLPLILIIFFTYFGLP- 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                    L F   ++                +  +A++ + +A +AEI+RSG++AV  
Sbjct: 81  --------HLGFKPGII---------------FAAILAMTIFESAMLAEIIRSGILAVDY 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A A G+++ +A   ++ PQA++  IP + SQ+++L+K++SLA  +   +L++   
Sbjct: 118 GQMEGARANGMSYVQALWHIVFPQAIKKTIPTIVSQFISLIKDTSLATIIVLPELLNHAQ 177

Query: 355 TIINQTGQAI 364
            I  Q    I
Sbjct: 178 IIYGQNSAYI 187


>gi|253701871|ref|YP_003023060.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           sp. M21]
 gi|251776721|gb|ACT19302.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M21]
          Length = 339

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 25/182 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP+L                       G T  P F +  + L   
Sbjct: 183 RGTPLLLQLFFIYYGLPSL-----------------------GVTFKP-FTAAILGLGLN 218

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++ EI+R G+ ++  GQMEAA A+G+++ +A R V++PQ  + ++PP+ ++++ L+K
Sbjct: 219 YSAYLGEIIRGGIQSIEHGQMEAAKAIGMSYWQAMRRVIIPQTYKRLMPPIGNEFIALIK 278

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++L   +   +L+     + N       +IL   FIYL  + +      ++  +  + E
Sbjct: 279 DTALVSTIAMVELMRSADQMFNAYFNVTALILA-AFIYLLFTTIFTFIFEKIEIRAGIYE 337

Query: 397 KK 398
            +
Sbjct: 338 NR 339


>gi|163793472|ref|ZP_02187447.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
 gi|159181274|gb|EDP65789.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
          Length = 205

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 86/172 (50%), Gaps = 23/172 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL +  F+ FGLP    I +++   FDK                 + S  I LS Y  A
Sbjct: 52  PLLLLIFFVYFGLPA---IGIRF---FDK-----------------YESFVITLSIYAGA 88

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ E+ R+GL +VP   +EAA A+GL   +    V+LP   R ++P L++  ++L K++S
Sbjct: 89  YLTEVFRAGLTSVPERYVEAAKAIGLKPWQTQLYVVLPLTFRIVLPSLSNNLISLFKDTS 148

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LA A+   +L      I   T + +E  L    +YL+   +IA+ + ++  +
Sbjct: 149 LATAIAIPELTFTARQINANTYRVMEAWLTASLLYLATCYLIAIALRQIEKR 200


>gi|325168928|ref|YP_004280718.1| deoxyfructosyl-amino acid ABC-type membrane transporter
           [Agrobacterium sp. H13-3]
 gi|325064651|gb|ADY68340.1| deoxyfructosyl-amino acid ABC-type membrane transporter
           [Agrobacterium sp. H13-3]
          Length = 502

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 19/183 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAA 279
           LY   F   GLP +V I L          +GQ F  IG     P    L I ALS    A
Sbjct: 67  LYTDIF--RGLPAIVTILL----------IGQGFARIGRELFGPSPYPLGILALSLIAGA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI RSG+ +V RGQMEA  AL +++ +  RL+++PQ +R ++P L +Q++  +K+SS
Sbjct: 115 YIGEIFRSGIQSVDRGQMEACRALSMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSS 174

Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +G      ++  VG      TG    ++L  +F YL +++ +   +N ++ ++ + 
Sbjct: 175 LVYFLGLLASEREIFRVGQDQAVVTGNLSPLLLAGVF-YLVVTVPLTHVVNAIDNRLRVG 233

Query: 396 EKK 398
           +++
Sbjct: 234 KQR 236


>gi|308187188|ref|YP_003931319.1| glutamine transport system permease protein glnP [Pantoea vagans
           C9-1]
 gi|308057698|gb|ADO09870.1| Putative glutamine transport system permease protein glnP [Pantoea
           vagans C9-1]
          Length = 222

 Score = 73.2 bits (178), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 102/196 (52%), Gaps = 13/196 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G V+ L A    R    +  K L L+++   LI G P +V +   Y   F  P++     
Sbjct: 37  GFVIGLLAGA-CRALGGRITKTLSLIFVE--LIRGTPIMVQVMFIY---FALPMVIPIR- 89

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                + P   +  + +   + A+IAEI R  ++++ +G  EA++A+GL+ R     V++
Sbjct: 90  -----IDP-ITAAIVTIVINSGAYIAEITRGAILSINKGFKEASLAMGLSQRSTQWHVIM 143

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R +IP L +Q++  +K++SL + +G A+L   G  II    +A+E+      IYL 
Sbjct: 144 PLALRRMIPALGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLL 203

Query: 377 LSIMIALFMNRLNAKI 392
           +++ ++  + +L  +I
Sbjct: 204 VTLCLSFLLKQLEKRI 219



 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           ++ SG++   +IG L GA R    ++   +  ++VE+ R  P +V + F+Y ++  V+PI
Sbjct: 29  ISLSGLLGGFVIGLLAGACRALGGRITKTLSLIFVELIRGTPIMVQVMFIYFALPMVIPI 88


>gi|258626080|ref|ZP_05720931.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM603]
 gi|258581606|gb|EEW06504.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM603]
          Length = 223

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           T++  +   VF+ +L +VL+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TLEMASWGLVFALILALVLANI-----RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    P+L   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|237654575|ref|YP_002890889.1| polar amino acid ABC transporter inner membrane subunit [Thauera
           sp. MZ1T]
 gi|237625822|gb|ACR02512.1| polar amino acid ABC transporter, inner membrane subunit [Thauera
           sp. MZ1T]
          Length = 216

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 76/133 (57%), Gaps = 1/133 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ ++ RGQ E A  LG ++ +  R ++LPQ ++ I
Sbjct: 85  PDFPAAIVAFALNYAAYFAEIFRAGIQSIDRGQYEGAKVLGFSYGQTMRRIVLPQVVKRI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   DL+     I+ +       I+   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTITPFIVAAAF-YLIMTLVLTW 203

Query: 384 FMNRLNAKIALKE 396
              RL  + A+ +
Sbjct: 204 LFQRLEKRHAVYD 216


>gi|294084529|ref|YP_003551287.1| ABC transporter permease [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664102|gb|ADE39203.1| ABC transporter permease protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 221

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 15/180 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHF 246
           ++F+   +LG+ L LF   L R    K  +     + ST F+ F   T VL+ + +  ++
Sbjct: 26  RLFIVCLILGMSLGLFVA-LGRRSRTKAVR-----WASTAFVEFFRNTPVLVQILW-FYY 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L          +SP F++  + +S  +AA+ AEI R G+ ++  GQ EAA A+G+ 
Sbjct: 79  ALPILAPVE------ISP-FIAAILGISLNSAAYSAEIYRGGIQSIEPGQWEAAKAIGMN 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++LPQA+R I+P LT++ + + K S+LA  V + +++  G  I +     +E+
Sbjct: 132 GLQVLRRIVLPQAIRRIVPALTNRGIEIFKMSTLASVVAYVEMLQQGKLIASLNFNPLEV 191



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 9/95 (9%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+ VG   T  L    +I    +G  V  GR S  K V W    +VE FRN P LV I +
Sbjct: 16  ALAVGLGGTLRLFIVCLILGMSLGLFVALGRRSRTKAVRWASTAFVEFFRNTPVLVQILW 75

Query: 148 LYKSVLSVLPIPDHSIVLPF-----GMFLNNRGLS 177
            Y +    LPI     + PF     G+ LN+   S
Sbjct: 76  FYYA----LPILAPVEISPFIAAILGISLNSAAYS 106


>gi|153841388|ref|ZP_01993400.1| 1-(5-phosphoribosyl)-5-[(5-
           phosphoribosylamino)methylideneamino]imidazole-4-
           carboxamide isomerase [Vibrio parahaemolyticus AQ3810]
 gi|149745487|gb|EDM56734.1| 1-(5-phosphoribosyl)-5-[(5-
           phosphoribosylamino)methylideneamino]imidazole-4-
           carboxamide isomerase [Vibrio parahaemolyticus AQ3810]
          Length = 338

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 20/130 (15%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST----------FLIFGLPTL 235
            + + + +FV+G++ ++  +  +R+    TG+  P+  I            + + G+P  
Sbjct: 216 GSGVVIAAFVIGLIATISISIWARNKQRLTGQQTPMGRIGLGLLVGLPLLVYFVSGMP-- 273

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             I+L+Y      P L  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  G
Sbjct: 274 --ISLEY------PELKGFNFKGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHG 325

Query: 296 QMEAAIALGL 305
           Q EAA++LGL
Sbjct: 326 QTEAAMSLGL 335


>gi|116494751|ref|YP_806485.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|191638263|ref|YP_001987429.1| Glutamine ABC transporter, permease protein [Lactobacillus casei
           BL23]
 gi|227535252|ref|ZP_03965301.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|301066312|ref|YP_003788335.1| amino acid ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|116104901|gb|ABJ70043.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|190712565|emb|CAQ66571.1| Glutamine ABC transporter, permease protein [Lactobacillus casei
           BL23]
 gi|227187136|gb|EEI67203.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|300438719|gb|ADK18485.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei str. Zhang]
 gi|327382296|gb|AEA53772.1| ABC transporter, permease protein [Lactobacillus casei LC2W]
 gi|327385491|gb|AEA56965.1| ABC transporter, permease protein [Lactobacillus casei BD-II]
          Length = 218

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 35/189 (18%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-----------PLLYI 224
           LS   +T+   A   + S  LG++LS+      +    K GK L           PLL  
Sbjct: 12  LSGVKMTLGIFAITLIGSIPLGLILSVGLIPKPKSILGKAGKGLLEGYVWVFRGTPLLLQ 71

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F+ +GLP + L+       FD+                 F +  +A     AA+ AEI
Sbjct: 72  LMFIFYGLPIIGLV-------FDR-----------------FSAALVAFILNYAAYFAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G  A+  GQ EA+  L +T  +A R V++PQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 108 FRGGFGAIDEGQFEASTVLNMTRWQALRYVVIPQVVKIVLPSIGNEVINLVKDSSLVYVI 167

Query: 345 GFADLVSVG 353
           G  DL+  G
Sbjct: 168 GLGDLLRAG 176


>gi|65318269|ref|ZP_00391228.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
          Length = 232

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 33  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 87  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 47  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87


>gi|315641164|ref|ZP_07896242.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus italicus DSM 15952]
 gi|315483088|gb|EFU73606.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus italicus DSM 15952]
          Length = 231

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 27/195 (13%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GL 232
           LS   +TM  +    VF  V G++L+L           K     PL ++++  I    G 
Sbjct: 14  LSGSVITMMISVVTIVFGTVFGVILALM----------KRSSIAPLKWVASTYIAVFRGT 63

Query: 233 PTLVLI----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIV 285
           P LV I     L +Q+    PV      IG   +  +F  L+   +ALS  + A++AEIV
Sbjct: 64  PMLVQILIANGLFHQVVTLPPVT-----IG--VLQIDFSRLFPGILALSLNSGAYVAEIV 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AV  GQ EAA +LG+   +  R ++ PQA+R+I+P L ++++ L+K+SSL   +G
Sbjct: 117 RGGINAVNSGQFEAARSLGMNGTQTMRYIIFPQALRNILPSLGNEFIVLIKDSSLLSTLG 176

Query: 346 FADLVSVGGTIINQT 360
             +L++    +I  +
Sbjct: 177 IYELMNSAQIVITSS 191


>gi|218459733|ref|ZP_03499824.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli Kim
           5]
          Length = 272

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + Y+ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAMRSI+P
Sbjct: 78  FAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 137

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K++S+   +   +L      I  +  + I +++   +W  I +++  +  
Sbjct: 138 TGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVAQ 197

Query: 383 LFMNRLNAKIALK 395
            ++ R  +K A++
Sbjct: 198 HYIERYFSKGAVR 210


>gi|187919666|ref|YP_001888697.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187718104|gb|ACD19327.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 248

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 24/163 (14%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP+L        +H D                 E  +  +A++    A+  EIVR
Sbjct: 75  FVFFGLPSL-------GIHID-----------------EVQAAILAMTVNLGAYAIEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ++AA ALGL  R+  R ++LPQA+ ++ P L SQ L ++  S++   +  
Sbjct: 111 AGIDSISRGQIQAAQALGLHGRQVFRFIVLPQAIANVFPALLSQVLIVMLGSAVVSQISV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            DL      I ++  ++ E  LI    YL LSI +   +NRL 
Sbjct: 171 PDLTYAANFIQSRNFRSFESYLIITATYLVLSIALRQILNRLG 213


>gi|296158852|ref|ZP_06841681.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891057|gb|EFG70846.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 312

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           I  + +   F +  I L+ Y   + AEI R G+ AV RGQ EA  A+G++       V++
Sbjct: 171 IDTNQIISRFSAAVIGLAMYLGGYSAEIFRGGVSAVDRGQREACKAIGMSDFHTMWHVVM 230

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL ++ + + KN+SL   +G+ +L++    I     + I ++ +    YL+
Sbjct: 231 PQAVRIIIPPLANELITMFKNTSLVTVIGYVELLTTVQLIYATNFETIPLLTVACIWYLA 290

Query: 377 LS 378
           L+
Sbjct: 291 LT 292


>gi|227823073|ref|YP_002827045.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342074|gb|ACP26292.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 222

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 34/200 (17%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKAL----------PLLYISTFLIFGLPTLVLIALKYQL 244
           VLGI++S+      R  ++   KA+          P L    F+ FGLPT+         
Sbjct: 33  VLGILISILLAAARRSRYDLLSKAVAVYVEVIRNTPFLVQLFFIFFGLPTI--------- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G  + P  ++  +A++   AA+  EIV +GL AVP+GQ EAA+ALG
Sbjct: 84  --------------GIRLDP-IVAAILAMTLNMAAYTTEIVGAGLDAVPKGQSEAALALG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +    V+LPQA++ I P LTSQ + ++  S++   +   +L      +  +T ++ 
Sbjct: 129 LRAPQVFIKVVLPQALKVIFPALTSQVVIMMLESAVVSQIAVRELAHEADLLQARTFRSF 188

Query: 365 EIILIWMFIYLSLSIMIALF 384
           E  L+   IYL LS+ I  F
Sbjct: 189 ETYLVVTMIYLGLSMAIRRF 208


>gi|218515414|ref|ZP_03512254.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli
           8C-3]
          Length = 549

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + Y+ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAMRSI+P
Sbjct: 124 FAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 183

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K++S+   +   +L      I  +  + I +++   +W  I +++  +  
Sbjct: 184 TGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVAQ 243

Query: 383 LFMNRLNAKIALK 395
            ++ R  +K A++
Sbjct: 244 HYIERYFSKGAVR 256


>gi|313107728|ref|ZP_07793910.1| hypothetical protein PA39016_001060055 [Pseudomonas aeruginosa
           39016]
 gi|187939707|gb|ACD38849.1| polar amino acid uptake transporter family protein [Pseudomonas
           aeruginosa]
 gi|310880412|gb|EFQ39006.1| hypothetical protein PA39016_001060055 [Pseudomonas aeruginosa
           39016]
          Length = 223

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 73/129 (56%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++AL     AF AE  R+G+ AVPR Q++A+ ALGL   + T  V+LPQA+RS +P L +
Sbjct: 95  FLALGLNLTAFNAEAYRAGVQAVPREQLDASTALGLKPWQRTLHVVLPQALRSAVPVLMT 154

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +  L+ S+L   V  +DL+ VG ++  +  + +E   +   +Y +LS+ +   +  L 
Sbjct: 155 NGIGSLQQSALVAIVAVSDLMYVGKSLATEAYRPLETYTLIALVYFALSLPVGQLVQYLE 214

Query: 390 AKIALKEKK 398
            +  L  ++
Sbjct: 215 RRQDLAVQR 223


>gi|158423073|ref|YP_001524365.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158329962|dbj|BAF87447.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 222

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 72/121 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  EI+R G+ ++ RGQ+EA +ALGL      RL++L  A+R++ P LTSQ
Sbjct: 95  IALGINGGAYAIEIIRGGVQSISRGQVEAGLALGLHKALVFRLIVLKPALRAVYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L   +S+A A+   +L SV   I + + ++ E+     F+YL +S M+  F   ++A
Sbjct: 155 FILLTLTTSIASAISAYELTSVAQRIESDSFRSFEVFGTATFMYLVISWMMMRFFALISA 214

Query: 391 K 391
           +
Sbjct: 215 R 215



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + TF LA  GM  A +IG      R S +  V ++ + +VEV RN P LV IFF+
Sbjct: 17  LLAGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAFVEVIRNTPFLVQIFFI 76

Query: 149 Y 149
           Y
Sbjct: 77  Y 77


>gi|153940673|ref|YP_001389816.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|152936569|gb|ABS42067.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|295317903|gb|ADF98280.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 211

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 57/82 (69%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+
Sbjct: 96  GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           S+L  A+G  D++     ++ +
Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR 177


>gi|153855472|ref|ZP_01996603.1| hypothetical protein DORLON_02617 [Dorea longicatena DSM 13814]
 gi|149752126|gb|EDM62057.1| hypothetical protein DORLON_02617 [Dorea longicatena DSM 13814]
          Length = 227

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 10/190 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +HF  K    L  +Y+S F   G P L+ + L Y   +  P++  F+ +      P+  +
Sbjct: 48  QHFRVKILSQLAKVYVSYFR--GTPLLIQLFLFY---YGLPMV--FDVMKRC---PKTFA 97

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L + L   +AA+I+E +R  + +V +GQ EA+IA GLTH +    ++LPQA  + IPP+ 
Sbjct: 98  LVLCLGLNSAAYISESIRGAIESVDKGQYEASIAFGLTHPQMMLKIILPQAAVAAIPPIV 157

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  L+++K SSL + +G  D++           +  E  ++    Y  L+I++ +   ++
Sbjct: 158 NSCLDIIKMSSLGMTIGIQDIMGEAQLTAATYYKTFETYILAAVFYWILAIVLGVVQKKV 217

Query: 389 NAKIALKEKK 398
              I+   +K
Sbjct: 218 EKIISSAYQK 227


>gi|329113273|ref|ZP_08242056.1| Inner membrane amino-acid ABC transporter permease protein YecS
           [Acetobacter pomorum DM001]
 gi|326697414|gb|EGE49072.1| Inner membrane amino-acid ABC transporter permease protein YecS
           [Acetobacter pomorum DM001]
          Length = 519

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 24/136 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP                         G +++P F++  ++L   
Sbjct: 360 RGTPLLIQVLFIFYGLPEF-----------------------GISLTP-FLAGVVSLGMN 395

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AE  R+GL +V  GQMEAA+AL +TH +A R V++PQA R ++P +T+ +++LLK
Sbjct: 396 YAAYEAENYRAGLQSVAHGQMEAALALNMTHAQALRYVVVPQAFRLVMPVMTNDFISLLK 455

Query: 337 NSSLAVAVGFADLVSV 352
           +SSL   +   +L   
Sbjct: 456 DSSLVSVITLTELTQT 471


>gi|209551407|ref|YP_002283324.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537163|gb|ACI57098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 226

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 92/170 (54%), Gaps = 14/170 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G++L L  T ++R F      A+   Y+  ++I G P LV +   + + +  P 
Sbjct: 28  LLSFAFGLILGLI-TAIARLFGPGPVAAIARFYV--WVIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A
Sbjct: 82  IG--------ILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
               +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  T
Sbjct: 134 MSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVATT 183


>gi|242279376|ref|YP_002991505.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122270|gb|ACS79966.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 297

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 73/129 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+S  + ++ +  A+I EIVR+G+ ++ + Q EA+ ALG   R     ++LPQA    
Sbjct: 161 PAFLSGVLTMALFEGAYITEIVRAGIESIDQEQWEASAALGFNRRNQLVHIILPQAFSRS 220

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL  Q+++ +K+SS+   +   +L   G  +++ T +  EI  + + +Y  L+   ++
Sbjct: 221 LPPLAGQFISTIKDSSIVSVISIQELTFAGQELMSATYRTFEIWSLVIIMYFILTFPCSI 280

Query: 384 FMNRLNAKI 392
            + +L  K+
Sbjct: 281 GVRKLEIKM 289



 Score = 43.9 bits (102), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)

Query: 64  LSERAGFEIDQGIVP-----YTSDSS--YATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           L++   +  D  ++P     Y S+S    A  +  G + T  L+   ++ A + GT++G 
Sbjct: 30  LAQGLNYNWDWSVIPDYIARYDSNSGDWRAGMLTQGLLVTLRLSLWSILLALVAGTIMGM 89

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            R+S   L+  I   YV + RNIPPLV+IF  Y
Sbjct: 90  WRVSPRPLLRMISSSYVGLVRNIPPLVLIFIFY 122


>gi|150396798|ref|YP_001327265.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150028313|gb|ABR60430.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 267

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 6/215 (2%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQL 244
            A + V +  +G+V+  F   L++   EK+ +    +Y + F   GLP L+ L  + Y L
Sbjct: 56  TASLAVATLPVGLVIGFFIA-LAKQSEEKSLRLAANIYTTIFR--GLPELLTLFIVYYGL 112

Query: 245 H-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               +  L    + G   ++  F++  IAL    +A+ +E++ S   A+P GQ EA  AL
Sbjct: 113 QILVQQFLATVGYDGAVEINA-FVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDAL 171

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   K  RL++LPQ +R  +P L + ++ LLK+++L   +G  D++   G     T  A
Sbjct: 172 GLHRGKTMRLIILPQLIRVALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHA 231

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E   +   ++L L+++ ++  + L       E +
Sbjct: 232 FEFFGVACVLFLVLAMISSIVFSALERSTKRAETR 266


>gi|50086449|ref|YP_047959.1| amino acid ABC transporter ATP-binding protein [Acinetobacter sp.
           ADP1]
 gi|49532425|emb|CAG70137.1| putative amino acid transport protein (ABC superfamily, ATP_bind
           and membrane) [Acinetobacter sp. ADP1]
          Length = 505

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 1/136 (0%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP F++  IA++   AA+IAEI R GL ++ +GQ+EA  ALG+      R +++PQA R 
Sbjct: 92  SP-FLAGLIAMTLSEAAYIAEIHRGGLTSITKGQIEAGKALGMKSLGIQRFIVIPQAFRV 150

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L ++Y++++K +SL   +   +++ VG  +  Q    +E +L   F Y+ +  +  
Sbjct: 151 ALPSLANEYVSIVKLTSLVSVISLTEILLVGQRLYTQNFLVLETMLAVAFYYVLIVTVFG 210

Query: 383 LFMNRLNAKIALKEKK 398
             +     KI +  +K
Sbjct: 211 WLIQWFEHKIDVTNRK 226


>gi|269103818|ref|ZP_06156515.1| putative amino acid ABC transporter permease protein
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163716|gb|EEZ42212.1| putative amino acid ABC transporter permease protein
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 223

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 31/209 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+  L +V++L   R+ R +   +   L LLYIS F   G P LV + L Y        
Sbjct: 31  IFALFLALVIAL--IRIKRIWGLNS---LSLLYISFFR--GTPLLVQLFLFYY------- 76

Query: 251 LGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                  G   V P F+ L       I LS + AA++AE +R  ++ +   Q EA++A+G
Sbjct: 77  -------GLPQVIPAFVGLDGYSAAVIGLSLHFAAYMAETIRGAILGIDNSQYEASLAIG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++ ++A R ++LPQAMR  +P L + +++++K++SLA A+G  ++++      + + +  
Sbjct: 130 MSEQQAMRRIILPQAMRIALPSLMNYFIDMIKSTSLAFALGVPEIMAKAQMEASSSFRFF 189

Query: 365 E----IILIWMFIYLSLSIMIALFMNRLN 389
           E    + LI+  I + L+ +  L   RLN
Sbjct: 190 EAFLAVALIYWLIVIVLTRLQTLAETRLN 218


>gi|218671516|ref|ZP_03521186.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli GR56]
          Length = 339

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 62/94 (65%), Gaps = 1/94 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV  + +   I +S + +A++AE++R GL A+P+GQ E A +LGL + +  RLV++PQ
Sbjct: 196 GWTVD-KLLRAIIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLVIMPQ 254

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           A++ +IP + + ++ + K++SL   +   DL+ +
Sbjct: 255 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 288


>gi|146307936|ref|YP_001188401.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145576137|gb|ABP85669.1| L-arginine ABC transporter membrane protein / L-ornithine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 232

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ I  S + P F S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDVIRDSFMWPYFSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L  +
Sbjct: 110 AYTAEILAGSLKATPHGEIEAAKAMGMSRAKLYRRILLPSALRRALPQYSNEVIMMLHTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+ +Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVSSQYYMPFEAFITAGLFYLVLTFILVRLF 216


>gi|16119238|ref|NP_395944.1| deoxyfructosyl-amino acid ABC-type membrane transporter
           [Agrobacterium tumefaciens str. C58]
 gi|5257497|gb|AAD41366.1|AF151698_3 GlnP/GlnQ-like protein [Agrobacterium tumefaciens str. C58]
 gi|15161737|gb|AAK90385.1| Deoxyfructosyl-amino acid ABC-type Membrane Transporter
           [Agrobacterium tumefaciens str. C58]
          Length = 502

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 19/183 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAA 279
           LY   F   GLP +V I L          +GQ F  IG     P    L I ALS    A
Sbjct: 67  LYTDIF--RGLPAIVTILL----------IGQGFARIGRELFGPSPYPLGILALSLIAGA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI RSG+ +V RGQMEA  AL +++ +  RL+++PQ +R ++P L +Q++  +K+SS
Sbjct: 115 YIGEIFRSGIQSVDRGQMEACRALSMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSS 174

Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +G      ++  VG      TG    ++L  +F YL +++ +   +N ++ ++ + 
Sbjct: 175 LVYFLGLLASEREIFRVGQDQAVVTGNLSPLLLAGVF-YLIVTVPLTHVVNAIDNRLRIG 233

Query: 396 EKK 398
           +++
Sbjct: 234 KQR 236


>gi|82776402|ref|YP_402751.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|309789344|ref|ZP_07683934.1| L-cystine transport system permease protein tcyB [Shigella
           dysenteriae 1617]
 gi|81240550|gb|ABB61260.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|308922738|gb|EFP68255.1| L-cystine transport system permease protein tcyB [Shigella
           dysenteriae 1617]
          Length = 222

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG +L+L   RLS  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFILALM--RLSPIWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   S  I LS  TAA+ AE +R+ + ++ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGMTPWQTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R  +LPQA R  +P L++ +++L+K++SLA  +   +L      I ++T +   + L   
Sbjct: 134 RRAILPQAARVALPTLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAAS 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  ++ +++   N    ++  +E++
Sbjct: 194 LIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 8/97 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y  +    + + PIP   I    G+ LN    +  TL
Sbjct: 75  YYGLPQFGIELDPIPSAMI----GLSLNTAAYAAETL 107


>gi|30260992|ref|NP_843369.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47777862|ref|YP_017493.2| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183837|ref|YP_027089.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|167635893|ref|ZP_02394201.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|167638970|ref|ZP_02397244.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|170687533|ref|ZP_02878749.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|170708257|ref|ZP_02898702.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|177653846|ref|ZP_02935918.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|229602267|ref|YP_002865432.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|30254441|gb|AAP24855.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47551567|gb|AAT29968.2| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177764|gb|AAT53140.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|167513100|gb|EDR88472.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|167528710|gb|EDR91469.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|170126778|gb|EDS95660.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|170668346|gb|EDT19093.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|172081074|gb|EDT66151.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|229266675|gb|ACQ48312.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
          Length = 235

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 36  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 89

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 90  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 142 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 178



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 50  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 90


>gi|258622956|ref|ZP_05717971.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM573]
 gi|262166783|ref|ZP_06034520.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262172776|ref|ZP_06040454.1| amino acid ABC transproter permease protein [Vibrio mimicus MB-451]
 gi|258584739|gb|EEW09473.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM573]
 gi|261893852|gb|EEY39838.1| amino acid ABC transproter permease protein [Vibrio mimicus MB-451]
 gi|262026499|gb|EEY45167.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 223

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           T++  +   VF+ +L +VL+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TLEMASWGLVFALILALVLANI-----RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    P+L   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|229125464|ref|ZP_04254521.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           95/8201]
 gi|228657992|gb|EEL13775.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           95/8201]
          Length = 219

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 20/179 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ FGLP L             PV+G++       V   F++  +     
Sbjct: 61  RGTPLLLQLLFICFGLPML-------------PVIGEY------LVMDRFVAACLGFILN 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+ +GQ EA+  LGL+  +  R V+LPQ  R  +P + ++ + L+K
Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++L  AV   +L+    T +N+    I    +   IYL +++++ +F   L  +   +
Sbjct: 162 DTALLYAVAVPELLHFAQTAVNRDF-TITPFFVAGLIYLIMTLVLTMFFKWLERRFKFE 219


>gi|168490636|ref|ZP_02714779.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
 gi|183574959|gb|EDT95487.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
          Length = 521

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +    ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|165871931|ref|ZP_02216573.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|190566522|ref|ZP_03019439.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196035250|ref|ZP_03102656.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|218902066|ref|YP_002449900.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|227816276|ref|YP_002816285.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228926026|ref|ZP_04089107.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228944595|ref|ZP_04106965.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229089915|ref|ZP_04221170.1| Amino acid ABC transporter [Bacillus cereus Rock3-42]
 gi|229120487|ref|ZP_04249734.1| Amino acid ABC transporter [Bacillus cereus 95/8201]
 gi|254682947|ref|ZP_05146808.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CNEVA-9066]
 gi|254725735|ref|ZP_05187517.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A1055]
 gi|254734361|ref|ZP_05192074.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Western North America USA6153]
 gi|254739991|ref|ZP_05197683.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Kruger B]
 gi|254753330|ref|ZP_05205366.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Vollum]
 gi|254758428|ref|ZP_05210455.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Australia 94]
 gi|164712362|gb|EDR17897.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|190562074|gb|EDV16042.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992314|gb|EDX56276.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|218537512|gb|ACK89910.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|227007055|gb|ACP16798.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228663072|gb|EEL18665.1| Amino acid ABC transporter [Bacillus cereus 95/8201]
 gi|228693540|gb|EEL47246.1| Amino acid ABC transporter [Bacillus cereus Rock3-42]
 gi|228815055|gb|EEM61306.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228833738|gb|EEM79294.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 209

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 10  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 64  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 24  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64


>gi|89072895|ref|ZP_01159452.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89051417|gb|EAR56872.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 311

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 1/145 (0%)

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            + VL  F F G S +     S  + +    AA+IAE++R+GL ++ +GQ EAA +LGL+
Sbjct: 161 QENVLQSFLF-GSSRLWENLFSGILCVGLIAAAYIAEVIRAGLDSIDKGQWEAADSLGLS 219

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ PQA+  I+P L  Q+++++K+SS+   +   ++  VG  + N +G   EI
Sbjct: 220 KLDRFRFVIFPQAIAGIVPALAGQFISIVKDSSIISLISIQEITFVGSEMANSSGLIFEI 279

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            L+   +YL L + ++L  N+L  +
Sbjct: 280 WLLVGAVYLILCLSLSLLFNKLEKR 304


>gi|115358613|ref|YP_775751.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115283901|gb|ABI89417.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 594

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 282 SAIQVQVERHYARGALR 298


>gi|297191655|ref|ZP_06909053.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721589|gb|EDY65497.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 301

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 83/137 (60%), Gaps = 4/137 (2%)

Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + +S +   LY     L  Y A+ +AE+VR+G++++P+GQ EAA A+GL   +    VLL
Sbjct: 130 TNISSDLRPLYAVVTGLVLYNASVLAEVVRAGILSLPKGQSEAAKAIGLRKGQTMTSVLL 189

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           PQ++ +++P L SQ + ++K+++L  AV  FA+L++  GT+       I   ++   I++
Sbjct: 190 PQSVTAMLPALVSQLVVIVKDTALGGAVLAFAELLNARGTLAAYYANVIPSFIVVAVIFI 249

Query: 376 SLSIMIALFMNRLNAKI 392
            L++++  F + L  ++
Sbjct: 250 VLNLILTTFASWLEGRL 266



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+T   ++ T +L G  NT   A   M+ A  +G L G  RLS ++ V     + VE FR
Sbjct: 52  PFTEAEAWTTYLLPGLANTLKAAALAMVIALPLGALFGIARLSDHRWVRVPASIIVEFFR 111

Query: 138 NIPPLVVIFF 147
            IP L+++ F
Sbjct: 112 AIPVLLLMLF 121


>gi|194468075|ref|ZP_03074061.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194452928|gb|EDX41826.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 233

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 104/201 (51%), Gaps = 6/201 (2%)

Query: 191 VFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + SF  G++++L     RLSR    + G  + L +I++F ++   +  L+   + + F  
Sbjct: 25  IISFFFGLIIALVTALIRLSR----QRGAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L     +        F +  I  S  T A+ +E +R+ + +VP GQ EA  A+G+T  
Sbjct: 81  PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAIGSVPTGQWEAGAAIGMTRL 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA+R  +PPL++ +++L+K++SLA ++   ++ +V   I  +  Q + +  
Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
           +   +Y   + +++ F   L 
Sbjct: 201 LVAMVYAVFTTILSYFQGYLE 221


>gi|170760706|ref|YP_001785786.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407695|gb|ACA56106.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 211

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 57/82 (69%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+
Sbjct: 96  GAYLAETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           S+L  A+G  D++     ++ +
Sbjct: 156 SALVAAIGIGDMLRAAKEVVTR 177


>gi|238853596|ref|ZP_04643965.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
 gi|238833740|gb|EEQ26008.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
          Length = 214

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 17/205 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246
           +IF ++ V+ I L L       H + K  KA+   Y+  ++I G P L+ LI + Y L  
Sbjct: 21  EIFFWTTVVSIPLGLLVA-FGLHSNLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G         V P + +  +A     AA+ AEI R GL AVP GQ EAA  LGL+
Sbjct: 76  --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G     +    + +
Sbjct: 126 RLQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
           +L+   +YL+++ ++   +  +  K
Sbjct: 186 VLVGC-VYLAMTAVLTALLRVVEKK 209


>gi|220923581|ref|YP_002498883.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948188|gb|ACL58580.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 216

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS + +AF+ EI R  +  VPRGQ EAA ALGL +     LV++PQA+R  +PP    
Sbjct: 90  LGLSLHASAFLGEIWRGSIETVPRGQWEAATALGLRYWPRMALVIVPQAVRIAVPPTIGF 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K +SLA  +GF +L      I N T +   +  +   +Y  +   ++ +  R+  
Sbjct: 150 LVQLIKGTSLASIIGFVELTRAAQIINNATFRPFTLFGLVALVYFVICWPLSAYSRRIEK 209

Query: 391 KIALKEK 397
             A+  +
Sbjct: 210 TFAVASR 216


>gi|91763311|ref|ZP_01265275.1| amino-acid ABC transporter permease protein yhdY-like protein
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717724|gb|EAS84375.1| amino-acid ABC transporter permease protein yhdY-like protein
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 426

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 63/97 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + + + +A++ + AA+ AE++R GL A+PRGQ +AA +LG+ + K    V+
Sbjct: 283 FLPDGTYVDKLIRVVVAITLFEAAYTAEVIRGGLQALPRGQYDAAKSLGMGYWKLHIFVI 342

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           LPQA++ +IP + + +L L+K++ L   VG  ++V +
Sbjct: 343 LPQALKLVIPGIANTFLALVKDTPLIFVVGLLEVVGM 379


>gi|327462744|gb|EGF09066.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 228

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288
           P ++LI   Y L     +L Q F  +G      +F  LY A   Y   T   ++EI+RS 
Sbjct: 64  PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ+EAA A+GLT+ +A R V+ PQA+RS +P L +  +NL+K +SL   +   D
Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRVVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++     + + Q  E  L+   IYL +  +I      L  + AL
Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227


>gi|315653364|ref|ZP_07906286.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|315489289|gb|EFU78929.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
          Length = 219

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 30/175 (17%)

Query: 191 VFSFVLGIVLSL---FATRLSRH---FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + SF+LG+ L +      ++  H   F     + LPLL I  F  FGLP           
Sbjct: 32  ILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPLLLIIFFAYFGLP----------- 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                   Q   +   T +       IAL  +  A +AEIVRSG+ AV +GQ+E A++ G
Sbjct: 81  --------QLGIVTNVTCAA-----IIALVVFEGAMLAEIVRSGIGAVNKGQLEGALSNG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +T+ +A   V++PQA+  +IP + SQ+++L+K++SLA  +   +L+     I +Q
Sbjct: 128 MTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVLPELLYHAQIIYSQ 182


>gi|304405413|ref|ZP_07387072.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304345452|gb|EFM11287.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 236

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 11/187 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F+ K  +  P+L     + FGLP L+             +   F +   S   P  + + 
Sbjct: 57  FYVKFIRGTPMLMHLFLIYFGLPKLI-----------DWLSASFGWSFTSVQIPILVFVL 105

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA S    A+++EIVRSG++AV RGQ+EAA+++G+T  +A R ++ PQA+   +P L++ 
Sbjct: 106 IAFSITAGAYMSEIVRSGMLAVDRGQLEAALSVGMTRTQAIRRIVFPQALAVSLPNLSNA 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  S++A  V   ++      +     +  E  +    IY +L+++I    + L  
Sbjct: 166 LIGMLHGSTVAFTVPVIEVFGQANIVAMTNWKYFEAFIAAAIIYWALTLLIEKSTSVLEK 225

Query: 391 KIALKEK 397
           +I+L  +
Sbjct: 226 RISLYNR 232


>gi|300718475|ref|YP_003743278.1| Glutamine ABC transporter, permease subunit [Erwinia billingiae
           Eb661]
 gi|299064311|emb|CAX61431.1| Glutamine ABC transporter, permease subunit [Erwinia billingiae
           Eb661]
          Length = 270

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 79/131 (60%), Gaps = 5/131 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A++ EI R+G+ +V RGQ+EA  ALG+++ +A  L+++PQ +R ++P + +Q+
Sbjct: 107 ALSLIASAYMGEIFRAGIQSVERGQLEACRALGMSYARAMSLIIIPQGIRRVLPAVVNQF 166

Query: 332 LNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + ++K+SSL   +G      +L  VG      TG    ++L  +F YL +++ +   +N 
Sbjct: 167 IAIIKDSSLVYLLGLMVNERELFRVGQDAAVLTGNLSPLMLAGLF-YLMITVPMTHLVNY 225

Query: 388 LNAKIALKEKK 398
           ++A+     +K
Sbjct: 226 VDARYRTGRRK 236


>gi|182441007|dbj|BAG24132.1| probable amino acid permease [Pseudomonas cichorii]
          Length = 246

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 68/112 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++ +  L+ Y++AFIAE  R+G+ +V   Q  A  A GL   +  R V+LPQA+R+ +
Sbjct: 112 EFIAGFWGLTLYSSAFIAEEFRAGVASVRPQQRIAGQAQGLRPVQVWRYVVLPQAVRTAL 171

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
            PL  Q +N+LKNSSL +A+G A+L      +  +T +A +   I   +Y++
Sbjct: 172 GPLLGQCMNVLKNSSLTMAIGLAELSYASRQVETETFKAFQAFGIATLLYIA 223



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 40/66 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L+    + AT +G L+   R+S+++  +W  R Y+ +FRN P LV +FF Y  
Sbjct: 21  GFLLTLRLSILVCLIATALGFLICLARISSSRFWSWPARGYLSLFRNTPLLVQLFFWYFG 80

Query: 152 VLSVLP 157
           V ++LP
Sbjct: 81  VSALLP 86


>gi|170738225|ref|YP_001779485.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820413|gb|ACA94995.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 597

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 282 SAIQVQVERHYARGALR 298


>gi|304414485|ref|ZP_07395705.1| putative amino acid transport system permease [Candidatus Regiella
           insecticola LSR1]
 gi|304283203|gb|EFL91605.1| putative amino acid transport system permease [Candidatus Regiella
           insecticola LSR1]
          Length = 241

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 109/223 (48%), Gaps = 11/223 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
            FP L +   A   + S + G+  ++  T L       TG    +L         +P ++
Sbjct: 17  GFPELPLGGAALTLLISLMAGLASAILGTLLGVLLAMTTGFWGQILAAVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL   T++++A  V++G++AV  GQ
Sbjct: 77  LI---FWTYFLLPIIFGVDI-------PEITTVVCALMLITSSYLAHAVKAGILAVGAGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGLSLGFNRWQVLLFIILPQALRMMVPSFVNQWIALIKDTSLAYIVGVNELTFLATQV 186

Query: 357 INQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            N++    +EI L    IY  L +++   +N +  +  +  ++
Sbjct: 187 NNRSMVYPMEIFLFVGCIYFVLCLLLDFLVNAITNEFRVTARR 229


>gi|294788441|ref|ZP_06753684.1| L-cystine ABC transporter, permease protein [Simonsiella muelleri
           ATCC 29453]
 gi|294483872|gb|EFG31556.1| L-cystine ABC transporter, permease protein [Simonsiella muelleri
           ATCC 29453]
          Length = 238

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S  T A+ +E +RS +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL++ 
Sbjct: 111 IGFSLNTGAYASETIRSAILSVPKGQWEAGFSIGMTYMQTFRRIIAPQAFRVAVPPLSND 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N +   + + +    +Y    +++ L   R+  
Sbjct: 171 FIGLFKNTSLASVVTVTELFRVAQQYANLSYDFLPVYIEAGVVYWCFCMVLFLIQARIEK 230

Query: 391 K 391
           +
Sbjct: 231 R 231


>gi|182439549|ref|YP_001827268.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178468065|dbj|BAG22585.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 305

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 76/128 (59%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   +  R ++LPQAMRSI+P   ++
Sbjct: 178 LGLALHQAAYAAEIVRGGVLAVGGGQLEAASALGIPRLRQLRRIVLPQAMRSILPNAANE 237

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387
            ++L K +S+   +   +L      +  ++G+ + ++++   W  +  +   ++  ++ R
Sbjct: 238 IISLFKGTSIVSVMAIGELFYQVQVVYGRSGRVVPLLMVATAWYILLTTALSIVQYYVER 297

Query: 388 LNAKIALK 395
             AK A++
Sbjct: 298 HYAKGAVR 305


>gi|171320895|ref|ZP_02909892.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171093838|gb|EDT38972.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 231

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 27/219 (12%)

Query: 191 VFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY- 242
           VF F L I ++        F  R+S+ F E              +I G P LV I L Y 
Sbjct: 29  VFGFGLAIAIAFARLSPNPFIARMSKGFTE--------------VIRGTPLLVQIYLIYY 74

Query: 243 ---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               L    P L    F     +   F  +  AL     A++ E++R+GL  VP+G++EA
Sbjct: 75  GVGSLFVGWPALRDSVFW--PFLRDGFWYVAFALVISVGAYVGEVLRAGLRGVPKGEIEA 132

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A+G+      R V LP+A++ ++P L  + + LLK+++LA  V   D++     I  Q
Sbjct: 133 ARAMGMRPSMIARRVSLPRAIQILLPTLAGETVMLLKSTALASTVAVMDVLGAANYIRAQ 192

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T +  E +L    IY++L+ +I     RL  ++ ++  +
Sbjct: 193 TLRTYEPLLAIAVIYVALAFVIEHAFGRLERRVPVRMPR 231


>gi|83854939|ref|ZP_00948469.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Sulfitobacter sp. NAS-14.1]
 gi|83842782|gb|EAP81949.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Sulfitobacter sp. NAS-14.1]
          Length = 431

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 1/91 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE++R GL A+PRGQ EAA +LGL + +A RL++LPQA++  IP + + 
Sbjct: 301 IMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNV 360

Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + L K+++L   +   DLV  + G I+  T
Sbjct: 361 AVGLFKDTTLVSIISMFDLVGMIRGPILAST 391


>gi|225029008|ref|ZP_03718200.1| hypothetical protein EUBHAL_03300 [Eubacterium hallii DSM 3353]
 gi|224953670|gb|EEG34879.1| hypothetical protein EUBHAL_03300 [Eubacterium hallii DSM 3353]
          Length = 243

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 76/137 (55%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           FI  ++ + + M   I     + A++AEI RSG+++V +GQMEA  +LGL +      ++
Sbjct: 101 FIVLASSNNKVMVAVITFGVNSGAYVAEIFRSGIMSVDKGQMEAGRSLGLGYTDTMLQII 160

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQA+++ +P L ++ + LLK +S+   +G  +L   G  I   T  A+  +LI   IYL
Sbjct: 161 MPQAIKNCLPALVNEMITLLKETSICGYIGLNELTRGGDIIRGITYDAMMPLLIVAVIYL 220

Query: 376 SLSIMIALFMNRLNAKI 392
            + +     M +L  ++
Sbjct: 221 VIVMFFTWLMGKLERRL 237


>gi|194397297|ref|YP_002037131.1| amino acid ABC transporter amino acid-binding protein/permease
           [Streptococcus pneumoniae G54]
 gi|194356964|gb|ACF55412.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae G54]
          Length = 521

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +    ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|78062381|ref|YP_372289.1| amino acid ABC transporter inner membrane protein [Burkholderia sp.
           383]
 gi|77970266|gb|ABB11645.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 619

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+ + AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 186 ISP-FLAAVLGLTLHHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMR 244

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 245 AILPTAFNDLIMLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 304

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 305 SAIQVQVERHYARGALR 321


>gi|71083648|ref|YP_266368.1| putative amino-acid ABC transporter permease protein yhdY
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062761|gb|AAZ21764.1| Similar to amino-acid ABC transporter permease protein yhdY
           [Candidatus Pelagibacter ubique HTCC1062]
          Length = 426

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 63/97 (64%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + + + +A++ + AA+ AE++R GL A+PRGQ +AA +LG+ + K    V+
Sbjct: 283 FLPDGTYVDKLIRVVVAITLFEAAYTAEVIRGGLQALPRGQYDAAKSLGMGYWKLHIFVI 342

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           LPQA++ +IP + + +L L+K++ L   VG  ++V +
Sbjct: 343 LPQALKLVIPGIANTFLALVKDTPLIFVVGLLEVVGM 379


>gi|254248371|ref|ZP_04941691.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124874872|gb|EAY64862.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 597

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 282 SAIQVQVERHYARGALR 298


>gi|283833319|ref|ZP_06353060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Citrobacter youngae ATCC 29220]
 gi|291070957|gb|EFE09066.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Citrobacter youngae ATCC 29220]
          Length = 225

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 10/135 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L+I    I G+P   LI + + + +  P+L   +  G  TV+       +AL+ +TAA +
Sbjct: 64  LFIWAGFIRGIP---LIFVIFWMWYLLPMLTGSDLPGAVTVT-------LALAWFTAASV 113

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
              V +G+ A+P GQ EAA+  G    +A RL+LLPQ +R+++P LT  ++ LLK++SLA
Sbjct: 114 MHSVYAGISALPGGQYEAAVVQGFHPFQALRLILLPQVLRNVMPSLTGIFIGLLKDTSLA 173

Query: 342 VAVGFADLVSVGGTI 356
             V   +L +V G +
Sbjct: 174 FIVNVPELTTVAGQV 188


>gi|196248813|ref|ZP_03147513.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. G11MC16]
 gi|196211689|gb|EDY06448.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. G11MC16]
          Length = 206

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 57/89 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA+S    A+++E VRS ++AV RGQ EAAIAL +T  +  RLV+LPQA+R ++
Sbjct: 72  SFWAGVIAVSLNYGAYVSETVRSCILAVDRGQHEAAIALNMTRFQRMRLVILPQAVRMML 131

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           P   +  + +LK++SL   +G  D+   G
Sbjct: 132 PDFGNNLIQMLKSTSLVSLIGLTDITYAG 160


>gi|86360891|ref|YP_472778.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284993|gb|ABC94051.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 219

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 65/115 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL  ++AAF+ EI R  + AV +GQ EA+ +LG+   +  R V+LPQA+R  
Sbjct: 84  PAWLAAGLALILWSAAFLTEIWRGCVEAVAKGQWEASASLGMGRLQQMRYVILPQALRIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           IPP     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L 
Sbjct: 144 IPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 198


>gi|295689851|ref|YP_003593544.1| polar amino acid ABC transporter inner membrane subunit
           [Caulobacter segnis ATCC 21756]
 gi|295431754|gb|ADG10926.1| polar amino acid ABC transporter, inner membrane subunit
           [Caulobacter segnis ATCC 21756]
          Length = 342

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 57/82 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++ + AA++AE VR GL+AVP+GQ EAA ALGL   +A   V+LPQA+R+  P L + 
Sbjct: 210 VAITLFEAAYMAEAVRGGLMAVPQGQREAARALGLGPLRALVDVVLPQALRTATPALVNS 269

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ LLK++SL   +G  D+  V
Sbjct: 270 FIGLLKDTSLLYVIGVLDITGV 291


>gi|258543772|ref|ZP_05704006.1| L-cystine ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258521008|gb|EEV89867.1| L-cystine ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 267

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E VR+ +++VPRGQ EA   +G+T+ +  R ++LPQA+R  +PPL++ 
Sbjct: 140 IGFSLNVGAYASETVRAAILSVPRGQWEAGFTIGMTYLQTFRRIILPQALRVSVPPLSNS 199

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILIWMFIYLSLSIMIALFMN 386
           ++ L K +SLA  V   +L      I N +       IE  L++      LS+  +    
Sbjct: 200 FIGLFKETSLASTVTITELFRAAQQIANASYDFLPVYIEAALVYWIFCFGLSLAQSRLER 259

Query: 387 RLNAKIA 393
           RL+  IA
Sbjct: 260 RLDRYIA 266


>gi|257888300|ref|ZP_05667953.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257896810|ref|ZP_05676463.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257899737|ref|ZP_05679390.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|293572975|ref|ZP_06683918.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           E980]
 gi|257824354|gb|EEV51286.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257833375|gb|EEV59796.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257837649|gb|EEV62723.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|291606953|gb|EFF36332.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           E980]
          Length = 213

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 41/221 (18%)

Query: 185 TNAKIFVFSFV----LGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231
           T  K+F+F+ +    LGI+L+L    LS HF         +    +  PLL    F+ +G
Sbjct: 17  TTLKLFLFTLIGSLPLGIILAL---GLSLHFKPLRYFLQTYVWIMRGTPLLLQLIFVFYG 73

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LPT+ ++       FD+                 F +  IA     AA+ AEI R G+ +
Sbjct: 74  LPTIGIV-------FDR-----------------FEAALIAFILNYAAYFAEIFRGGIQS 109

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +G  D++ 
Sbjct: 110 IPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMR 169

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G   + +    + ++ + + IYL+L+ ++ + M ++  K+
Sbjct: 170 AGKIAMERDATLLPLLGVAI-IYLTLTGILTIVMKQVEGKL 209


>gi|237650335|ref|ZP_04524587.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974]
 gi|237822023|ref|ZP_04597868.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974M2]
          Length = 521

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G++AV +GQ EAA ALG+TH +    ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTV 492


>gi|91784416|ref|YP_559622.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91688370|gb|ABE31570.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 313

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 3/120 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ Y   + AEI R G+ AV RGQ EA  A+G++  +    V++PQA+R IIPPL ++
Sbjct: 186 IGLAMYLGGYSAEIFRGGVSAVDRGQREACKAIGMSDFRTMWHVVMPQAVRIIIPPLANE 245

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIALFMNR 387
            + + KN+SL   +G+ +L++    I     + I ++    IW  +  SL++     + R
Sbjct: 246 LITMFKNTSLVTVIGYVELLTTVQLIYATNFETIPLLTVACIWYLVLTSLAMAAQSLLER 305


>gi|327193781|gb|EGE60658.1| amino acid ABC transporter permease [Rhizobium etli CNPAF512]
          Length = 308

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A GL+  K TR + LP+A+R  +P +  + +  LK 
Sbjct: 190 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA 249

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +L+    YL+L+ +IA     L A++ ++ 
Sbjct: 250 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAQVPVRR 308


>gi|325063883|gb|ADY67573.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 216

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 59/95 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ EI R G+ AVP+GQ EAA ALGL +    + V+LPQA +  +P
Sbjct: 85  WIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAANALGLHYLSRMKDVVLPQAFKISLP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
                 + L+K +SLA  VGF +L   G  + NQT
Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQT 179


>gi|300811765|ref|ZP_07092238.1| putative arginine ABC transporter, permease protein ArtQ
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|313124503|ref|YP_004034762.1| glutamine ABC transporter permease component [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|300497264|gb|EFK32313.1| putative arginine ABC transporter, permease protein ArtQ
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|312281066|gb|ADQ61785.1| Glutamine ABC transporter permease component [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 213

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 20/146 (13%)

Query: 228 LIFGLPTLVLIA---------LKYQLHF------DKPVLGQ--FNFIGGSTVS---PEFM 267
           LIF LP  +L++         LK+ L+F        P+L Q  F F G   V    P +M
Sbjct: 26  LIFSLPLGILVSFGLSSRFAPLKWLLNFYVWLMRGTPLLLQLIFVFYGLPIVGLTFPRYM 85

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +A      A+ AEI R G  A+ RGQ EAA  L LT+ +  R +++PQ ++ ++P +
Sbjct: 86  AALVAFVLNYTAYFAEIFRGGNQAIDRGQFEAAKVLQLTYGQTLRKIVIPQVIKIVLPSI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVG 353
            ++ +NL+K+SSL   +G  DL+  G
Sbjct: 146 GNEVINLVKDSSLVYVIGLGDLLRAG 171


>gi|289627187|ref|ZP_06460141.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289648679|ref|ZP_06480022.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|330868024|gb|EGH02733.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 220

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 11/164 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    +++   +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVQVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|107026286|ref|YP_623797.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116692525|ref|YP_838058.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105895660|gb|ABF78824.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116650525|gb|ABK11165.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 597

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 282 SAIQVQVERHYARGALR 298


>gi|27381509|ref|NP_773038.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27354677|dbj|BAC51663.1| blr6399 [Bradyrhizobium japonicum USDA 110]
          Length = 222

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 65/110 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    AF AEI+R G+  +PRGQ EA  ALGL   +  R ++   A+R+I P L SQ
Sbjct: 95  IALSLNAGAFAAEIIRGGIDGIPRGQFEAGAALGLHPFQVLRFIVFKPALRAIYPALASQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           ++ LL  SS+  A+   +L +   ++   T ++ EI ++   +YL ++++
Sbjct: 155 FVLLLLTSSIVSAISAEELTAAAQSVDTLTFRSFEIYIVATLLYLLMALV 204


>gi|251787824|ref|YP_003002545.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247536445|gb|ACT05066.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 227

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 113/209 (54%), Gaps = 17/209 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ VLG+VL+L   R SR         L  +YIS F   G+P+LV +   + ++F  P 
Sbjct: 35  LFAIVLGLVLAL--IRESRFV---VVSKLVEIYISLFR--GIPSLVQL---FIIYFGLPQ 84

Query: 251 L-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           L    N +   T +       I  S   +A++AEI R+ L +V  GQ EA +++G+   +
Sbjct: 85  LFPSLNGLSAMTAA------IIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVGMNKVQ 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQAM + +P   + +++L+K++S+A A+G ++L + G  I  ++ +  E  L+
Sbjct: 139 IYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFFETFLV 198

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IY  L ++ +   ++L  K++   ++
Sbjct: 199 VGLIYWLLIVVYSWLQSQLEKKLSHSRQR 227


>gi|190894697|ref|YP_001984990.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700358|gb|ACE94440.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 442

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 65/115 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL  +TAAF+AEI R  + +V  GQ EA+ +LG+   +  R V+LPQA+R  
Sbjct: 307 PAWLAAGMALILWTAAFLAEIWRGCVESVASGQWEASASLGMGRLQQMRYVILPQALRVA 366

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           IPP     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L 
Sbjct: 367 IPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALC 421


>gi|126736640|ref|ZP_01752380.1| amino acid ABC transporter, permease protein [Roseobacter sp. CCS2]
 gi|126713953|gb|EBA10824.1| amino acid ABC transporter, permease protein [Roseobacter sp. CCS2]
          Length = 432

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 62/91 (68%), Gaps = 1/91 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++  IP + + 
Sbjct: 302 IMITMFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNV 361

Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + L K++ L   +   DL+  + G I++ T
Sbjct: 362 AVGLFKDTVLVSVISMFDLLGMIRGPILSST 392


>gi|190015056|ref|YP_001966754.1| amino acid ABC transporter, permease protein [Bacillus cereus]
 gi|190015322|ref|YP_001967078.1| amino acid ABC transporter, permease protein [Bacillus cereus]
 gi|116584732|gb|ABK00847.1| amino acid ABC transporter, permease protein [Bacillus cereus]
 gi|116585003|gb|ABK01112.1| amino acid ABC transporter, permease protein [Bacillus cereus]
          Length = 201

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 20/175 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ FGLP L             PV+G++       V   F++  +     
Sbjct: 43  RGTPLLLQLLFICFGLPLL-------------PVIGEY------LVMDRFVAACLGFILN 83

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+ +GQ EA+  LGL+  +  R V+LPQ  R  +P + ++ + L+K
Sbjct: 84  YAAYFAEIFRGGLLAIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIK 143

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++L  AV   +L+    T +N+    I    +   IYL +++++ +F   L  +
Sbjct: 144 DTALLYAVAVPELLHFAQTAVNRDF-TITPFFVAGLIYLIMTLVLTMFFKWLERR 197


>gi|15894165|ref|NP_347514.1| amino acid ABC transporter permease [Clostridium acetobutylicum
           ATCC 824]
 gi|15023774|gb|AAK78854.1|AE007603_5 Amino acid ABC transporter permease component [Clostridium
           acetobutylicum ATCC 824]
 gi|325508293|gb|ADZ19929.1| Amino acid ABC transporter permease component [Clostridium
           acetobutylicum EA 2018]
          Length = 221

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 25/190 (13%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLS--RHFHEKTGKALPLLY 223
           G FLN    SFP L    +  IF  V S ++G+V+   AT L+  +    K    +  +Y
Sbjct: 6   GYFLN----SFPDLLKYIHYTIFMAVISTIIGLVI---ATILAPIKMLKIKGLSQVIGVY 58

Query: 224 ISTFLIFGLPTLV-LIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           IS F   G P LV L    Y L    KP+           V+P   ++ + LS   +A++
Sbjct: 59  ISFFR--GTPLLVQLFVFYYGLPQLIKPL---------KNVTP-LEAMILGLSLCGSAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R  + +V +GQMEAA+++G+T  +A   ++ PQA+R  IP + +Q+++LLK+SSLA
Sbjct: 107 AEIIRGAIESVEKGQMEAALSVGMTKFQAFTRIIYPQAIRVAIPGIGNQFVDLLKSSSLA 166

Query: 342 VAVGFADLVS 351
             +G  ++++
Sbjct: 167 FVLGLTEILA 176


>gi|126466428|ref|YP_001041537.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylothermus marinus F1]
 gi|126015251|gb|ABN70629.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylothermus marinus F1]
          Length = 229

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 72/122 (59%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++ +   +AA+ +E +RS + AVPRGQ EAA+++G+T  +A   ++ P A+RS IP LT+
Sbjct: 95  FLGMGLNSAAYQSEYLRSSIKAVPRGQWEAALSIGMTRWQAMTSIIAPIALRSSIPALTN 154

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + + LLK SSLA  +   +LV  G  I   T   ++I  I   IY +LS ++   M  + 
Sbjct: 155 ELVYLLKYSSLAYFLTVIELVYAGKIIGAATFAYLQIYTIIAIIYFALSYIMMRIMKIIE 214

Query: 390 AK 391
            K
Sbjct: 215 KK 216


>gi|319942012|ref|ZP_08016331.1| hypothetical protein HMPREF9464_01550 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804396|gb|EFW01274.1| hypothetical protein HMPREF9464_01550 [Sutterella wadsworthensis
           3_1_45B]
          Length = 221

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 14/190 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+V+++ A  L R    KT    PL  I  ++  G P LV +   + + F  P +G
Sbjct: 31  SFAIGLVVAV-AIALIRT--AKTPVLEPLARIYVWIFRGTPALVQL---FVIFFGLPSIG 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V   F S  IA S    A+ +E +R+ + AVP+GQ+EA + +G++  +   
Sbjct: 85  --------IVIDAFPSAVIAFSLNVGAYASEALRAAISAVPKGQLEAGLCVGMSWTQTMF 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA R+  PPL +++++L+KN+SLA ++   ++      I  +T +   + L    
Sbjct: 137 RIVLPQAFRTAFPPLFNEFISLVKNTSLASSITVYEMFMSAQRIAARTYEPFWLYLEAAV 196

Query: 373 IYLSLSIMIA 382
           IYL+ + +++
Sbjct: 197 IYLAFTTILS 206


>gi|241895475|ref|ZP_04782771.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Weissella paramesenteroides ATCC 33313]
 gi|241871449|gb|EER75200.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Weissella paramesenteroides ATCC 33313]
          Length = 235

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 30/184 (16%)

Query: 193 SFVLGIVLSLFAT--RLSR------------HFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           SF LG++L+L     R+S+            +F+    ++ PLL     + FGLP LV+ 
Sbjct: 27  SFALGLILALITALVRISQKGKEFKIIKGIFNFYVWLFRSTPLLVQLFIVYFGLPYLVIP 86

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +      D+          G  ++P F++  I  S  T A+ +E +R+ + +VP+GQ E
Sbjct: 87  GI-----LDE----------GIKLTP-FVAGVITFSLNTGAYASETIRAAITSVPQGQWE 130

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ++G+T  +  R ++LPQA+   +PPL + +++L+K++SLA  +   ++  V   I  
Sbjct: 131 AASSIGMTRSQTLRRIILPQAIYLSVPPLANSFISLVKDTSLAATITIVEMFEVSQQIAA 190

Query: 359 QTGQ 362
           +  Q
Sbjct: 191 ENYQ 194


>gi|222152518|ref|YP_002561693.1| glutamine ABC transporter glutamine-binding protein/permease
           [Streptococcus uberis 0140J]
 gi|222113329|emb|CAR40917.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus uberis 0140J]
          Length = 516

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +   +L   G T+  Q  Q  +   +   IY  L+  +   +  +  +I
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIAVIYFILTFTVTRILRYVERRI 503


>gi|330432539|gb|AEC17598.1| glutamine ABC transporter permease protein [Gallibacterium anatis
           UMN179]
          Length = 249

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 17/174 (9%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF++G+V++L    L     +HF  K   AL   YIS   I G P   L+A  + + +
Sbjct: 51  IISFIVGMVIALAIALLRVTPRKHFLHKIAYALSGFYISA--IRGTP---LLAQLFIIFY 105

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G        T+ P   +  IA S  T A+ +E VR+ +++VP+GQ EA   +G++
Sbjct: 106 ALPNVG-------ITLDP-LPTAIIAFSLNTGAYASETVRAAILSVPKGQWEAGYTIGMS 157

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           + +    ++ PQA+R  +PPL++ ++ LLK +SLA  V   +++     I ++T
Sbjct: 158 YWQNFFRIIAPQALRVAVPPLSNSFIGLLKETSLASVVLVPEMMRQANVISSRT 211


>gi|324009100|gb|EGB78319.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
          Length = 347

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 105 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 151

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 201 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 257 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296


>gi|318603944|emb|CBY25442.1| glutamate aspartate transport system permease protein GltK
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 369

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 55/81 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + +A++AE+VR GL A+P+GQ EA  +LGL + K   LV+LPQA++ +IP L + 
Sbjct: 238 VGVVLFQSAYVAEVVRGGLQALPKGQTEATESLGLGYWKTQGLVILPQALKMVIPGLVNT 297

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + L K++SL + +G  DL S
Sbjct: 298 IIALFKDTSLVIIIGLFDLFS 318


>gi|138895922|ref|YP_001126375.1| amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267435|gb|ABO67630.1| Amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 206

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 57/89 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA+S    A+++E VRS ++AV RGQ EAAIAL +T  +  RLV+LPQA+R ++
Sbjct: 72  SFWAGVIAVSLNYGAYVSETVRSCILAVDRGQHEAAIALNMTRFQRMRLVILPQAVRMML 131

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           P   +  + +LK++SL   +G  D+   G
Sbjct: 132 PDFGNNLIQMLKSTSLVSLIGLTDITYAG 160


>gi|324324591|gb|ADY19851.1| amino acid ABC transporter, permease protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 217

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 60/92 (65%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS +    I EIVR  L ++P+GQ+EA  ++G+  ++  + VL+PQA+R +IP   + +
Sbjct: 96  ALSLWGITEIGEIVRGALQSLPKGQVEAGKSIGMNKKQLYQYVLIPQAIRRMIPATINIF 155

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           + +++ +SL V +G  +++  G  I+ +TG+A
Sbjct: 156 IRIIQTTSLTVLIGVTEVIKAGQQIVERTGEA 187


>gi|241894752|ref|ZP_04782048.1| glutamate superfamily ATP binding cassette transporter, membrane
           protein [Weissella paramesenteroides ATCC 33313]
 gi|241871964|gb|EER75715.1| glutamate superfamily ATP binding cassette transporter, membrane
           protein [Weissella paramesenteroides ATCC 33313]
          Length = 483

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 23/176 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L ++ F+  G+P L                       G  + P F +  I L   
Sbjct: 330 RGLPMLVLAFFIYIGIPNLT----------------------GQKI-PAFTAGVITLILN 366

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+I   V  G  +V  GQ+EAA +LGL + KA R V++PQ +R +IP   +Q++  LK
Sbjct: 367 EGAYIGAFVSGGFKSVDSGQLEAARSLGLPYGKAMRKVVMPQGIRLMIPSFINQFIITLK 426

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+  A+G  +L   G  II +  Q   + L+   +YL +  ++    N +  +I
Sbjct: 427 DTSILSAIGIIELTQTGTLIIARNLQGFRVWLMIAVLYLIVITLLTWLSNWVEKRI 482


>gi|299820601|ref|ZP_07052491.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299818096|gb|EFI85330.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 213

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 60/92 (65%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G++++ +GQ E+A  LGL++ +  R ++LPQ ++ ++P + ++ +NL+K+
Sbjct: 96  AAYFAEIFRGGILSIEKGQYESAKVLGLSYGQTVRKIVLPQVIKRVLPAIGNEVINLVKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           SSL   +G  DL+  G    N+    I ++L+
Sbjct: 156 SSLVYVLGLGDLLRAGKIASNRDVTLIPLVLV 187


>gi|34496728|ref|NP_900943.1| glutamine transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34102583|gb|AAQ58948.1| glutamine transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 227

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 62/96 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +++ +AL+   +A++ + V +GL AV RGQ  A +ALG +  +  R ++LPQA+R +
Sbjct: 94  PGLLTVILALALIHSAYLGQAVLAGLTAVGRGQWHAGLALGFSRWQTLRWLILPQALRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +P   +Q+++LLK+SSLA  VG A+   V   + N+
Sbjct: 154 LPSFINQWVSLLKDSSLAYIVGVAEFTFVATQVNNR 189


>gi|73661928|ref|YP_300709.1| putative ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494443|dbj|BAE17764.1| putative ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 227

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 92/160 (57%), Gaps = 11/160 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+ +LG +L+    RL     +K     P++ +    I   P L+ + L Y   F  P 
Sbjct: 29  IFALILGFILA--TIRL-----QKIKLLSPVVKVYISFIRSTPLLLQLFLVY---FALPQ 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  F  I  +  S  F  + +A + +T A+++EI+R+G  +V   Q+EA +++GLT+ + 
Sbjct: 79  LLLFVHIDINHFSRLFFVI-LAFTLHTGAYLSEIIRAGYQSVDYRQIEAGLSIGLTYPRI 137

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            + ++LPQA+R+ IP LT+Q + L+K++SLA  +G  D++
Sbjct: 138 LKEIILPQALRNSIPNLTTQIIELVKDTSLAFTIGIIDMM 177


>gi|83941462|ref|ZP_00953924.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Sulfitobacter sp. EE-36]
 gi|83847282|gb|EAP85157.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Sulfitobacter sp. EE-36]
          Length = 431

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 1/91 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE++R GL A+PRGQ EAA +LGL + +A RL++LPQA++  IP + + 
Sbjct: 301 IMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNV 360

Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + L K+++L   +   DLV  + G I+  T
Sbjct: 361 AVGLFKDTTLVSIISMFDLVGMIRGPILAST 391


>gi|298291389|ref|YP_003693328.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927900|gb|ADH88709.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 458

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 58/81 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++ ++AA++AE++R GL A+P+GQ E A+A+GLT  +  RL++LPQA+  +IP + + 
Sbjct: 326 VGVALFSAAYMAEVIRGGLQAIPKGQYEGAMAVGLTWSQMMRLIILPQALTLVIPGIVNS 385

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +++L K+++L + V   D + 
Sbjct: 386 FISLFKDTTLVLIVSIFDFLG 406


>gi|326780213|ref|ZP_08239478.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326660546|gb|EGE45392.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 305

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 76/128 (59%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   +  R ++LPQAMRSI+P   ++
Sbjct: 178 LGLALHQAAYAAEIVRGGVLAVGGGQLEAASALGIPKLRQLRRIVLPQAMRSILPNAANE 237

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNR 387
            ++L K +S+   +   +L      +  ++G+ + ++++   W  +  +   ++  ++ R
Sbjct: 238 IISLFKGTSIVSVMAIGELFYQVQVVYGRSGRVVPLLMVATAWYILLTTALSIVQYYVER 297

Query: 388 LNAKIALK 395
             AK A++
Sbjct: 298 HYAKGAVR 305


>gi|288961594|ref|YP_003451904.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913874|dbj|BAI75360.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 284

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 72/121 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A+++EI R+G+ +V  GQ EAA+ALGL+  +    V+LPQA R +IPP  +Q
Sbjct: 157 LALSLNYGAYLSEIFRAGVQSVAPGQREAAMALGLSRGQIAWTVILPQATRFVIPPTGAQ 216

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ +LK+SSL    G  ++  +  +    + + +E++L    +Y  LS++     +RL  
Sbjct: 217 FVAMLKDSSLVSVTGLWEINFLAQSYGRSSYRYVEMLLTAAVVYWMLSLIFEHVQSRLEV 276

Query: 391 K 391
           +
Sbjct: 277 R 277


>gi|312868037|ref|ZP_07728241.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096441|gb|EFQ54681.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 520

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 64/109 (58%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G++AV  GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  Q  Q      I   IY  L+  I
Sbjct: 443 INIKDTSVLNVISVVELYFTGNTVATQNYQYFPTFTIIAVIYFILTFTI 491


>gi|298486874|ref|ZP_07004930.1| Amino acid ABC transporter permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298158741|gb|EFH99805.1| Amino acid ABC transporter permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320324338|gb|EFW80417.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320328539|gb|EFW84541.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 324

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 18/212 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 96  VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148

Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VLG       F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 149 IVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268

Query: 363 AIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
            I +++   +W  I  +L      ++ R  A+
Sbjct: 269 VIPLLIVATVWYLIITTLLTSAQYYVERHFAR 300


>gi|148653870|ref|YP_001280963.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148572954|gb|ABQ95013.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 246

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 22/214 (10%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVL 237
           K+ + S  +G+VL L     +LS+ +        +  T + +P L +  FL +G   L++
Sbjct: 20  KLALSSLAIGLVLGLLGATAKLSKIWILRKLATVYTATMRGIPELLLVLFLYYGGSMLIM 79

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
                       +L +F +     VSP F++  +ALS    A+  E+ R  +  +P+GQ 
Sbjct: 80  -----------AILQKFGYNDYVEVSP-FLAGVLALSIAFGAYATEVFRMAIQEIPKGQW 127

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A+G+   +    +++PQ  R  +P L + +L LLK+++L   VG  D++       
Sbjct: 128 EAAEAIGMKPMQLYFRIIVPQVWRLALPGLGNLFLVLLKDTALVSVVGLKDIMYHAARGA 187

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             T QA    +   FIYL L+I++  FM  L  +
Sbjct: 188 QATQQAFTFYMAAAFIYLGLTIVVTAFMMWLEWR 221


>gi|321313515|ref|YP_004205802.1| putative ABC transporter permease [Bacillus subtilis BSn5]
 gi|320019789|gb|ADV94775.1| putative ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 224

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 15/190 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L         H+     L  LYIS F   G+PTLV + L   +++  P L  F  
Sbjct: 38  GLILALITKNKIPVLHQ-----LSKLYISFFR--GVPTLVQLFL---IYYGLPQL--FPE 85

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +   T      +  I LS   AA++AEI R+ L +V  GQ+EA +++G+T  +A R ++L
Sbjct: 86  MSKMTA---LTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+ IP   + ++ LLK +SLA  +G  ++ + G    +   +  E  L    +Y  
Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWV 202

Query: 377 LSIMIALFMN 386
           L+I+ ++  +
Sbjct: 203 LTIIYSMLQD 212


>gi|255598386|ref|XP_002536997.1| abc transporter, putative [Ricinus communis]
 gi|223517868|gb|EEF25387.1| abc transporter, putative [Ricinus communis]
          Length = 390

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 64/113 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IALS    A++AEI+RSGL AV +GQ  A +ALG++     R +++PQA R ++P
Sbjct: 5   FASAVIALSLNEGAYMAEIIRSGLQAVKKGQRTAGLALGMSRFAVMRYIVIPQAARIVLP 64

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           P  +Q + +LK S+L   V   +L+ V     +   +  E +      YL+L+
Sbjct: 65  PTGNQMIGMLKTSALVSVVAVEELLLVANQTASSNFKYFEALTAAGIYYLALT 117


>gi|153939214|ref|YP_001390775.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|170756000|ref|YP_001781066.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|152935110|gb|ABS40608.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|169121212|gb|ACA45048.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
 gi|295318847|gb|ADF99224.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 219

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   AA+++EI+R+ +I++ RGQ EA  +LG T  +    ++LPQA +  +PPL + 
Sbjct: 94  IGLALNGAAYMSEIIRAAIISIDRGQEEAGFSLGYTRLQNLCYIILPQAAQISVPPLVNG 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
           + +LLK++SL   +   +L   G  I ++T +  E+ L     Y  L+ ++++   F+ +
Sbjct: 154 FSSLLKDTSLISVISITELTRSGNLIYSRTARPFEVYLTLGLFYFVLTYIVSICSKFIEK 213

Query: 388 LNAK 391
            N K
Sbjct: 214 RNEK 217


>gi|94986086|ref|YP_605450.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM
           11300]
 gi|94556367|gb|ABF46281.1| amino acid ABC transporter membrane protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 223

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 1/125 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TVSP  +    AL+  +AA+++E +R+ +++VPRGQ EAA +LGLT R+  +L++LPQ
Sbjct: 87  GITVSP-LVGGVAALTLNSAAYLSETIRAAILSVPRGQWEAAYSLGLTPRQTLQLIVLPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +P L +  + L+K++SL   +   +L+     +I +T +     L    IY ++S
Sbjct: 146 AARVALPSLGNTLIGLVKDTSLVSVITVVELLRSAQLVIARTFEPFGPYLAAALIYWAIS 205

Query: 379 IMIAL 383
            ++ L
Sbjct: 206 SLLEL 210


>gi|260463339|ref|ZP_05811540.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259030929|gb|EEW32204.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 385

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 60/88 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +++   I +S + AA++AE+VR GL A+P+GQ E A +LGL + +   L++LPQA++ +I
Sbjct: 247 KYLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMSLIVLPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ + K++SL + +   DL+ +
Sbjct: 307 PGIVNTFIGMFKDTSLVLIISMFDLLGI 334



 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +P+   S +      G + T  L+F G+  +  +GT++  GR S   +V  +C +++E  
Sbjct: 165 LPHVETSRWG-----GLLITLSLSFVGIAVSLPLGTVLALGRRSKMPIVKMLCVIFIEAV 219

Query: 137 RNIPPLVVIFFL 148
           R IP + V+FF+
Sbjct: 220 RGIPLITVLFFV 231


>gi|239940211|ref|ZP_04692148.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291443641|ref|ZP_06583031.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998]
 gi|291346588|gb|EFE73492.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998]
          Length = 297

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 78/128 (60%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   +  R ++LPQAMRSI+P   ++
Sbjct: 170 LGLALHQAAYAAEIVRGGVLAVGSGQLEAAAALGIPKFRQLRRIVLPQAMRSILPNAANE 229

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
            ++L K +S+   +   +L      +  + G+ + ++++    Y+ L+ ++++   ++ R
Sbjct: 230 IISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATAWYILLTTVLSVLQHYVER 289

Query: 388 LNAKIALK 395
             AK A++
Sbjct: 290 HYAKGAVR 297


>gi|71736000|ref|YP_274549.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556553|gb|AAZ35764.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 324

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 103/212 (48%), Gaps = 18/212 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 96  VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148

Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VLG       F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 149 IVLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268

Query: 363 AIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
            I +++   +W  I  +L      ++ R  A+
Sbjct: 269 VIPLLIVATVWYLIITTLLTSAQYYVERHFAR 300


>gi|302868837|ref|YP_003837474.1| polar amino acid ABC transporter inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315504694|ref|YP_004083581.1| polar amino acid abc transporter, inner membrane subunit
           [Micromonospora sp. L5]
 gi|302571696|gb|ADL47898.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315411313|gb|ADU09430.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora sp. L5]
          Length = 325

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 54/75 (72%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FM+  + L+   AA++AEIVR+G+ +V  GQ EAA ALGL+  +  R V+LPQAMR IIP
Sbjct: 169 FMAGLLGLALSEAAYMAEIVRAGIQSVDPGQTEAAQALGLSRAQLLRRVVLPQAMRVIIP 228

Query: 326 PLTSQYLNLLKNSSL 340
           P  ++ + +LK++SL
Sbjct: 229 PTGNETIAMLKDTSL 243


>gi|163800419|ref|ZP_02194320.1| arginine ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175862|gb|EDP60656.1| arginine ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 229

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV RGQ EAA ALG++  +A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQSEAASALGISQTQAFVCIVLPQAIR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLVT 205

Query: 382 ALFMNRLNAKIALK 395
              +  ++ K +++
Sbjct: 206 QRVVKMIDKKFSIQ 219


>gi|167725481|ref|ZP_02408717.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei DM98]
 gi|217424148|ref|ZP_03455647.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|237508257|ref|ZP_04520972.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|254186972|ref|ZP_04893487.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254263010|ref|ZP_04953875.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|157934655|gb|EDO90325.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|217392613|gb|EEC32636.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|235000462|gb|EEP49886.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|254214012|gb|EET03397.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 235

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 17/186 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F++G++  +F     R +       L  +YI   LI G P +V +     L+F  P+L 
Sbjct: 50  GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 99

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                G S          +A++  + A++AE+VR  L+++P+G  EA +A+GL+  +   
Sbjct: 100 HVRIDGLSAA-------VVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 152

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ P A R +I PL +Q +  LK++SL + +G  +L   G  II    QA+EI      
Sbjct: 153 KIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 212

Query: 373 IYLSLS 378
           IYL L+
Sbjct: 213 IYLVLT 218


>gi|323485322|ref|ZP_08090671.1| hypothetical protein HMPREF9474_02422 [Clostridium symbiosum
           WAL-14163]
 gi|323694083|ref|ZP_08108262.1| hypothetical protein HMPREF9475_03125 [Clostridium symbiosum
           WAL-14673]
 gi|323401358|gb|EGA93707.1| hypothetical protein HMPREF9474_02422 [Clostridium symbiosum
           WAL-14163]
 gi|323501800|gb|EGB17683.1| hypothetical protein HMPREF9475_03125 [Clostridium symbiosum
           WAL-14673]
          Length = 221

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 77/127 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    ++++AE++R+G+ AV +GQ EAA +LG+T       ++LPQA+++I+P L ++
Sbjct: 95  IALIINASSYVAEVIRAGIQAVDKGQTEAARSLGMTGSHTMTQIILPQAIKNILPALGNE 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K +SLA      +L +   TI + T + +E ++I   IYL ++ ++   M     
Sbjct: 155 FITMIKQASLASVFFINELTTSYKTISSATFRPVEALMIAGIIYLMVTTVLGKIMEYAEW 214

Query: 391 KIALKEK 397
           ++   E+
Sbjct: 215 RMNRNER 221



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G   T  LA   +   T+IG ++   RLS  K   W  R Y+ V R  P L
Sbjct: 10  DRYGFVYLQGLTGTLCLAAITVFFGTLIGMILAIMRLSRVKPFQWFVRFYIWVLRGTPIL 69

Query: 143 VVIFFLYKSVLSVLP--IPDHSIVL 165
           + ++F +  +  VLP  I D S ++
Sbjct: 70  LQLYFFWIFLPRVLPVKISDSSCII 94


>gi|29829029|ref|NP_823663.1| glutamate transporter permease [Streptomyces avermitilis MA-4680]
 gi|29606135|dbj|BAC70198.1| putative glutamate ABC transporter permease [Streptomyces
           avermitilis MA-4680]
          Length = 301

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 113/222 (50%), Gaps = 23/222 (10%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   V +  LG VL +   RLS H   +    +P+  +  F    +P L+L+   
Sbjct: 71  TLKAAALSMVIAMPLGAVLGI--ARLSDHRWVR----VPVSIVVEFF-RAIPVLILMIFG 123

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298
             L+ +            + VS +   LY     L  Y A+ +AEIVR+G++++P+GQ E
Sbjct: 124 VALYSEY-----------TNVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQSE 172

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTII 357
           AA+A+GL   +  R +LLPQA+  ++P + SQ + ++K+++L  AV  F++L++  G + 
Sbjct: 173 AAMAIGLRKNQVMRFILLPQAVTVMLPAIVSQLVVIVKDTALGGAVLTFSELLASVGPMS 232

Query: 358 NQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G   I    I   IY++++  +  F + L  ++   +K 
Sbjct: 233 GYYGANTIASFTIVALIYIAINFSLTTFASWLEGRLRRGKKS 274



 Score = 36.6 bits (83), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++S  ++ T +  G  NT   A   M+ A  +G ++G  RLS ++ V     + VE FR 
Sbjct: 54  FSSTEAWTTYLWPGLQNTLKAAALSMVIAMPLGAVLGIARLSDHRWVRVPVSIVVEFFRA 113

Query: 139 IPPLVVIFF 147
           IP L+++ F
Sbjct: 114 IPVLILMIF 122


>gi|320530102|ref|ZP_08031172.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
 gi|320137535|gb|EFW29447.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
          Length = 244

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 2/106 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+I+E+ R+   AVPRGQ EAAI  GL+  +A   V+LPQA    +P   +  +NLLK 
Sbjct: 102 GAYISEVFRAAYKAVPRGQYEAAICAGLSPVQAFAHVMLPQAAIVALPNFGNASINLLKE 161

Query: 338 SSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMI 381
            SLA  +G  DL+  G  II Q      IEI L  M +Y ++ +++
Sbjct: 162 GSLAYTIGLIDLIGKGNLIIAQNFGAYGIEIYLACMLVYWAVVLLL 207


>gi|242241399|ref|YP_002989580.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133456|gb|ACS87758.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 244

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 80/136 (58%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G+ A+ RGQ +A ++LG    +  R ++LPQA+R +
Sbjct: 94  PEITTVVCALALIASAYLAHGVKAGIAAIGRGQWQAGLSLGFGRWRVLRYIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFVALVYFLLCLTLD 213

Query: 383 LFMNRLNAKIALKEKK 398
           L  N ++ +   + ++
Sbjct: 214 LAANAVSRRFHHRLRQ 229


>gi|228932271|ref|ZP_04095155.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827396|gb|EEM73146.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 209

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 10  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 64  FYGLPTLN-------VEVEP-YTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 24  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64


>gi|261377615|ref|ZP_05982188.1| amino acid ABC transporter, permease protein [Neisseria cinerea
           ATCC 14685]
 gi|269146368|gb|EEZ72786.1| amino acid ABC transporter, permease protein [Neisseria cinerea
           ATCC 14685]
          Length = 219

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 34/220 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPT 234
           LT++ +A   V S + G+ +++      R F+       +  +  PLL    FL +GLP 
Sbjct: 19  LTLELSAYGIVLSLLFGLPVAVVTAYRIRPFYALARTYIELSRNTPLLIQLFFLYYGLP- 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                 K  + +D                  F    IAL    A+++AE +R+G++AVP+
Sbjct: 78  ------KMGIKWDG-----------------FTCGVIALVFLGASYMAEAIRAGILAVPK 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EA  A+GL   +  R V LPQA    +P + +  L L+K +S+  AVG A+L+ V  
Sbjct: 115 GQIEAGKAIGLNQFQVFRYVELPQAWAVAVPAIGANVLFLMKETSIVSAVGIAELLFVTK 174

Query: 355 TIINQTGQAIEIILI----WMFIYLSLSIMIALFMNRLNA 390
            II    +  E + +    ++ I L +S++     NR+ +
Sbjct: 175 DIIGMDYKTNEALFLLFASYLIILLPVSLLARWAENRVRS 214


>gi|127514093|ref|YP_001095290.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella loihica PV-4]
 gi|126639388|gb|ABO25031.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella loihica PV-4]
          Length = 226

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 75/123 (60%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+     + V+LPQA+++I+P L ++
Sbjct: 101 IAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLSQAVTMKEVILPQAIKNILPALGNE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL----SIMIALFMN 386
           ++ LLK +++   +G  DL+  G  I ++T +    +     IYL+L    + M++ F  
Sbjct: 161 FIVLLKETAVIGFIGGVDLMRSGEIIRSRTFEDSVPLFTCALIYLALTYSFTFMLSKFEK 220

Query: 387 RLN 389
           RL 
Sbjct: 221 RLK 223


>gi|298291727|ref|YP_003693666.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296928238|gb|ADH89047.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 220

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 14/198 (7%)

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L+ F   L R    +T + L   Y+   LI G P LV++ L +   F    +G FN    
Sbjct: 33  LAGFLVALGRVSPSRTVRLLAATYVQ--LIQGTPLLVIMFLSF---FGLAAIG-FN---- 82

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             +SP   +   +++ + AA++ EI R  + AVPR Q EAA  L L+  +    V+LPQA
Sbjct: 83  --ISP-LAAAGASMTIFVAAYLGEIWRGCIEAVPRPQWEAAEGLALSRSQRMVKVILPQA 139

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R   PP     + ++KN+SLA  VGF +L   G  I N   +   I  I   +Y SL  
Sbjct: 140 IRIATPPTVGFMVQIIKNTSLASVVGFVELTRSGQIINNSMFEPFLIYSIIAVVYFSLCY 199

Query: 380 MIALFMNRLNAKIALKEK 397
            ++    RL  + AL++K
Sbjct: 200 PLSRLSRRLE-RTALQKK 216


>gi|239986699|ref|ZP_04707363.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
          Length = 297

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 78/128 (60%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   +  R ++LPQAMRSI+P   ++
Sbjct: 170 LGLALHQAAYAAEIVRGGVLAVGSGQLEAAAALGIPKFRQLRRIVLPQAMRSILPNAANE 229

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
            ++L K +S+   +   +L      +  + G+ + ++++    Y+ L+ ++++   ++ R
Sbjct: 230 IISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATAWYILLTTVLSVLQHYVER 289

Query: 388 LNAKIALK 395
             AK A++
Sbjct: 290 HYAKGAVR 297


>gi|295111597|emb|CBL28347.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Synergistetes bacterium
           SGP1]
          Length = 226

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 60/101 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F ++ I LS   AA++ E +R  + +V RGQ EA I++G+T  +  R +++PQA R  +
Sbjct: 90  SFWAVVIVLSLSFAAYMGENIRGAISSVDRGQFEAGISIGMTPWQTIRRIVIPQAARVAL 149

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           P + + + NL K++SLA  VG  D+ S     +N T + +E
Sbjct: 150 PGMVNSFANLFKSTSLAFTVGVMDMTSCAKNEVNLTYRYLE 190


>gi|241666976|ref|YP_002985060.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862433|gb|ACS60098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 222

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 4/121 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  EI+R G+ ++P+GQMEA +ALGL   +  RL++L  A+R+I P LTSQ
Sbjct: 95  IALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLHKAQVFRLIILKPALRAIYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI----ALFMN 386
           ++ L   +S+A A+   +L SV   I +++ ++ E+       Y  +S ++    ALF  
Sbjct: 155 FVLLTLTTSIASAISAYELTSVSQRIESESFRSFEVYFTVTVFYFVISWLMMRIFALFSA 214

Query: 387 R 387
           R
Sbjct: 215 R 215



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G + TF LA  GM+ A +IG    A R SA K   W+   +VE+ RN P LV IFF+
Sbjct: 17  LLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPARWLVIAFVELIRNTPFLVQIFFI 76

Query: 149 Y 149
           Y
Sbjct: 77  Y 77


>gi|297618710|ref|YP_003706815.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus voltae A3]
 gi|297377687|gb|ADI35842.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus voltae A3]
          Length = 220

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 72/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS    A+I+EIVR+ L+++P+GQ +A  +LG++  ++   V++PQ +R  +P L + 
Sbjct: 93  LGLSLNGGAYISEIVRASLLSIPKGQWDACSSLGMSKVQSLIYVIIPQTIRISMPSLMNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +  ++K SSL   +   +L  VG  I  +T    E+ ++   IYLS+  M++L  + +  
Sbjct: 153 FSAIIKESSLVSVIAITELTRVGQLIYTKTSSPFEVYIVVAIIYLSVIGMVSLLSDLIEK 212

Query: 391 KI 392
           ++
Sbjct: 213 RL 214



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIPPLVVIF 146
           A+  G V T  +AF   I A II  +VG  R L+  K V  + R YVE+FR +P L+++F
Sbjct: 13  ALFWGLVITLKIAFLSFIFAVIIAHIVGILRALNIPKPVDMLFRGYVEIFRGVPLLILLF 72

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           F+Y  + S+  + D++     G+ LN 
Sbjct: 73  FIYYGLPSIGIVMDNTTAAVLGLSLNG 99


>gi|327468420|gb|EGF13905.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 228

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288
           P ++LI   Y L     +L Q F  +G      +F  LY A   Y   T   ++EI+RS 
Sbjct: 64  PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D
Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++     + + Q  E  L+   IYL +  +I      L  + AL
Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227


>gi|332163170|ref|YP_004299747.1| ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667400|gb|ADZ44044.1| ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862827|emb|CBX72968.1| inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia enterocolitica W22703]
          Length = 367

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 55/81 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + +A++AE+VR GL A+P+GQ EA  +LGL + K   LV+LPQA++ +IP L + 
Sbjct: 236 VGVVLFQSAYVAEVVRGGLQALPKGQTEATESLGLGYWKTQGLVILPQALKMVIPGLVNT 295

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + L K++SL + +G  DL S
Sbjct: 296 IIALFKDTSLVIIIGLFDLFS 316


>gi|307546907|ref|YP_003899386.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307218931|emb|CBV44201.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 364

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 70/112 (62%), Gaps = 8/112 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A++AE+VR GL A+P GQ EAA ALG+ + +   L++LPQA++ +IP + + 
Sbjct: 236 IGIMFFWSAYMAEVVRGGLQAIPSGQEEAAKALGMGYWRRMGLIVLPQALKLVIPGIVNT 295

Query: 331 YLNLLKNSSLAVAVGFADLVSV---GGTIINQTGQAIE-----IILIWMFIY 374
           ++ L K++SL + +G  DL+++   G T  N  G A E      ++ W+F +
Sbjct: 296 FIALFKDTSLVLIIGLFDLLAIIRAGLTDSNWLGFATEGYVFAALMFWVFCF 347


>gi|172063350|ref|YP_001811001.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171995867|gb|ACB66785.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 594

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 80/137 (58%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 282 STIQVQVERHYARGALR 298


>gi|325523728|gb|EGD01988.1| putative ABC transporter permease [Burkholderia sp. TJI49]
          Length = 255

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 10/206 (4%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VLG+V++L      R    +  + L   Y+  +++ G P LV I   Y   F    + +F
Sbjct: 39  VLGLVVALM-----RSSSNRALQVLARGYV--WVMRGTPLLVQIVFLYT-AFAAANVFRF 90

Query: 255 NFI--GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           + +  G  T+     +  +AL   +AA++AEI+R+GL +V RGQ EA+ +LG+      R
Sbjct: 91  HDLDFGWITLPGNIQAAVLALGMNSAAYMAEIIRAGLGSVDRGQYEASRSLGMPTMLLMR 150

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA+R I+PP+ ++   +LKN++L   +G  +L+     I +   +  E+ L+   
Sbjct: 151 RIVLPQALRVIVPPMGNEVNVMLKNTTLVSVIGVQELLLSTQMITSVNFRVFELYLVLAI 210

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
            +L L+ +      R+ A     + +
Sbjct: 211 YFLLLTTLWGFVQRRIEAHFGRGDAR 236


>gi|300741911|ref|ZP_07071932.1| glutamate permease [Rothia dentocariosa M567]
 gi|311111807|ref|YP_003983029.1| glutamine ABC transporter membrane protein [Rothia dentocariosa
           ATCC 17931]
 gi|300381096|gb|EFJ77658.1| glutamate permease [Rothia dentocariosa M567]
 gi|310943301|gb|ADP39595.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Rothia dentocariosa ATCC 17931]
          Length = 227

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 24/211 (11%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFVLG +L+L       + R +   +    +  PL  + T  + G+ T      ++QL F
Sbjct: 34  SFVLGAILALMRISPVPSLRWAGTIYVHLFRNTPLTILMTLALLGVWT------QFQLSF 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                 + NF         F+   I LS Y A+F+ E +RSG+  VP GQ EAA A+GL 
Sbjct: 88  STDF--ETNF---------FVYAVIVLSIYHASFVCEAIRSGVNTVPTGQAEAARAIGLG 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIE 365
                R+++ PQA+R  I PL +  + L KN+++A     A+   +  ++I       + 
Sbjct: 137 FMDTARMIIFPQALRGSITPLGNTLIALAKNTTVASVASVAEASGMMKSMIEFDANMVLA 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I LI+   ++++ + + +     + K+A+K 
Sbjct: 197 IFLIFALGFVAIVVPLGILTTWSSRKLAVKR 227


>gi|330427592|gb|AEC18926.1| polar amino acid ABC transporter, inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 223

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 11/132 (8%)

Query: 274 SCYTAAFIA----------EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           S YTAA +A          EIVR+G+ ++P+GQ+EA +AL L+  +  R V+L  A+++I
Sbjct: 88  SPYTAALVAMVFNLGAYATEIVRAGIESIPKGQIEAGLALNLSRLEVFRFVVLKPALKAI 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P LTSQ++ L+  SS+   +   DL SV   + ++T ++ EI ++   IYL L++    
Sbjct: 148 YPALTSQFILLMLASSVVSVISADDLTSVAANLQSETFRSFEIYIVVTGIYLLLTLAFT- 206

Query: 384 FMNRLNAKIALK 395
           F+ RL  + +L 
Sbjct: 207 FVFRLAYQWSLN 218


>gi|294083877|ref|YP_003550634.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663449|gb|ADE38550.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 225

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 78/140 (55%), Gaps = 3/140 (2%)

Query: 254 FNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           +NF  I G  +SP FM+  I L  YTAA +A++ RSG+ A P     AA +LG+T+ +  
Sbjct: 83  YNFFPIIGLPLSP-FMAGTIVLIVYTAALVAQVARSGVEATPLPMRRAARSLGMTYFQDI 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+ P  +R+++P  T   L +LK+S+L   +G+ +L+     ++ +T +   I+ +  
Sbjct: 142 RYVVFPIGLRAVLPAWTGVALGVLKDSALVSVLGYVELLRASQILVTRTQEPFIILAVVG 201

Query: 372 FIYLSLSIMIALFMNRLNAK 391
             Y  LS  IA   +RL  +
Sbjct: 202 GFYFMLSYPIARITDRLEKR 221


>gi|206563412|ref|YP_002234175.1| ABC transporter ATP-binding membrane protein [Burkholderia
           cenocepacia J2315]
 gi|198039452|emb|CAR55419.1| ABC transporter ATP-binding membrane protein [Burkholderia
           cenocepacia J2315]
          Length = 599

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 222 AILPTAFNDLITLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 282 SAIQVQVERHYARGALR 298


>gi|49480129|ref|YP_035105.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331685|gb|AAT62331.1| amino acid ABC transporter, permease [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 226

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 27  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 81  FYGLPTLN-------VEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 133 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 169



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 41  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 81


>gi|312865871|ref|ZP_07726092.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098275|gb|EFQ56498.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 230

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 73/122 (59%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA ++E+ ++  +AVP+GQMEA +++GLT  +  R +LLPQ  +  +P + +  LNL+K+
Sbjct: 109 AASVSEVFKAAYLAVPKGQMEAGLSIGLTGYQTFRRILLPQIFKIALPNIITAILNLMKD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E      FIY  L++++++  + L   + L+
Sbjct: 169 AALAYTIGLVDVMGAGNLLISRNLGNYSLETYTAVAFIYWGLALILSVASHLLEHHLDLE 228

Query: 396 EK 397
             
Sbjct: 229 NS 230


>gi|311111176|ref|ZP_07712573.1| amino acid ABC transporter, permease protein [Lactobacillus gasseri
           MV-22]
 gi|311066330|gb|EFQ46670.1| amino acid ABC transporter, permease protein [Lactobacillus gasseri
           MV-22]
          Length = 217

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 17/192 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246
           +IF ++ V+ I L L       H + K  KA+   Y+  ++I G P L+ LI + Y L  
Sbjct: 24  EIFFWTTVVSIPLGLLVA-FGLHSNLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G         V P + +  +A     AA+ AEI R GL AVP GQ EAA  LGL+
Sbjct: 79  --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G     +    + +
Sbjct: 129 RWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 188

Query: 367 ILIWMFIYLSLS 378
           +L+   +YL+++
Sbjct: 189 VLV-GCVYLAMT 199


>gi|307131247|ref|YP_003883263.1| ABC transporter permease [Dickeya dadantii 3937]
 gi|306528776|gb|ADM98706.1| ABC transporter permease protein [Dickeya dadantii 3937]
          Length = 228

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 21/154 (13%)

Query: 234 TLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           T VLI L +  ++  PVL   QF+  G +T         +AL+ YTAA+  EI R+GL +
Sbjct: 71  TPVLIQLIW-FYYALPVLLGIQFSTFGAAT---------LALTLYTAAYSTEIFRAGLQS 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ E A ALG+++  A R V+LPQ ++ ++P LT++ + L K +SLA  +   +L+ 
Sbjct: 121 MEQGQWEGAKALGMSYPLALRRVILPQVLQRMLPALTNRLIELAKVTSLASMLAVNELMY 180

Query: 352 VGGTIINQTGQAIEI---------ILIWMFIYLS 376
            G  + + T + +EI         +LIW   YL+
Sbjct: 181 QGRLLSSDTYRPLEILTVVALFYFVLIWPGSYLA 214


>gi|319761714|ref|YP_004125651.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317116275|gb|ADU98763.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 248

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 109/210 (51%), Gaps = 24/210 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--H-FD 247
           V +F LG+VL+L   RLS  F   +  A  ++Y+    + G+P ++ I   Y +  H   
Sbjct: 40  VLAFPLGVVLAL--CRLS-PFRFLSWPATAIVYV----VRGVPLIMFIFWTYFIVPHILG 92

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           +PV G               ++ + L  Y +A++AEIVR+G+  +P GQ EAA A+GL++
Sbjct: 93  RPVAG-------------ITTMLVTLVIYQSAYLAEIVRAGMQGLPFGQTEAARAIGLSY 139

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI-INQTGQAIEI 366
            + T  VLLPQA+ +++P + SQ+++ +K+++L   +   +L      I  N      ++
Sbjct: 140 MQTTFKVLLPQAIYNMVPAIISQFVSSIKDTALGYVISVNELTFAASQINANLLTMPFQV 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++   IY  +  ++      L  +IAL+ 
Sbjct: 200 YILLASIYFVICALLTQLARYLERRIALRR 229


>gi|13474335|ref|NP_105903.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14025088|dbj|BAB51689.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 230

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 4/147 (2%)

Query: 253 QFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           Q+ +I  S + P     +    +AL+   A +  E++R     VP+GQ+EAA A G++  
Sbjct: 82  QYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGEVMRGAFAGVPQGQLEAARAFGMSRW 141

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           K  + +LLPQA    +P LT + +  LK++ L   +   D+ +V G +   T    E +L
Sbjct: 142 KIFQRILLPQAFYRALPTLTGETVLQLKSTPLVATISVIDIFAVAGKVRQDTYLTYEPLL 201

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   IY++++ ++ L ++R+ A+I +K
Sbjct: 202 LLALIYMAITGILVLALSRIEARIPVK 228


>gi|312897773|ref|ZP_07757189.1| ABC transporter, permease protein [Megasphaera micronuciformis
           F0359]
 gi|310621157|gb|EFQ04701.1| ABC transporter, permease protein [Megasphaera micronuciformis
           F0359]
          Length = 216

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 1/126 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA     AA+ AEI R G+ ++ RGQ E A  LG+T+ +  R ++LPQ ++ ++PP+ ++
Sbjct: 91  IAFVLNYAAYFAEIFRGGIQSIDRGQYEGAKVLGMTYAQTMRRIVLPQVLKRVLPPVANE 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NLLK++SL   +   D++ +  +I+ +       I+  +F YL  + ++  F   L  
Sbjct: 151 TINLLKDTSLVYILAMNDVLRITRSIVQRDFDTTAFIVAAVF-YLVFTFILTRFFMYLEK 209

Query: 391 KIALKE 396
           +  + E
Sbjct: 210 RFNVYE 215


>gi|198242194|ref|YP_002215134.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197936710|gb|ACH74043.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326622883|gb|EGE29228.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 222

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 20/208 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLPQF 81

Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G + + I  +          I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  + 
Sbjct: 82  GIELDPIPAAM---------IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQT 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R  +LPQA    +PPL++ +++L+K++SLA  +   +L      I ++T +   + L  
Sbjct: 133 LRRAILPQAAHVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             IY  ++ +++   N    ++  +E++
Sbjct: 193 SLIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|161502926|ref|YP_001570038.1| hypothetical protein SARI_00985 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864273|gb|ABX20896.1| hypothetical protein SARI_00985 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 222

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 20/208 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLPQF 81

Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G + + I  +          I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  + 
Sbjct: 82  GIELDPIPAAM---------IGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQT 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
               +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L  
Sbjct: 133 LHRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAA 192

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             IY  ++ +++   N    ++  +E++
Sbjct: 193 SLIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|44004547|ref|NP_982216.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|218848267|ref|YP_002455140.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|229113501|ref|ZP_04242950.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           Rock1-15]
 gi|229164678|ref|ZP_04292542.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           R309803]
 gi|296506620|ref|YP_003667854.1| amino acid ABC transporter permease protein [Bacillus thuringiensis
           BMB171]
 gi|42741613|gb|AAS45058.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|218540318|gb|ACK92714.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|228618758|gb|EEK75720.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           R309803]
 gi|228669919|gb|EEL25313.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           Rock1-15]
 gi|296327207|gb|ADH10134.1| amino acid ABC transporter, permease protein [Bacillus
           thuringiensis BMB171]
          Length = 219

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 20/175 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ FGLP L             PV+G++       V   F++  +     
Sbjct: 61  RGTPLLLQLLFICFGLPLL-------------PVIGEY------LVMDRFVAACLGFILN 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+ +GQ EA+  LGL+  +  R V+LPQ  R  +P + ++ + L+K
Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++L  AV   +L+    T +N+    I    +   IYL +++++ +F   L  +
Sbjct: 162 DTALLYAVAVPELLHFAQTAVNRDF-TITPFFVAGLIYLIMTLVLTMFFKWLERR 215


>gi|327441796|dbj|BAK18161.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 227

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 20/174 (11%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEI 284
           G+PTL+ I + Y               G   + P F SL        ALS   AA+++E+
Sbjct: 64  GVPTLIQIFIFY--------------FGIPQLFPSFSSLDAITAVIFALSVKNAAYLSEV 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RS  +AV +GQ EA  A+ +T  +  R V+LPQ +R  IP   + Y+ ++K +SLA  +
Sbjct: 110 FRSAFLAVDKGQFEACDAMNMTKWQGLRTVILPQVLRVAIPASGNYYIMMIKETSLAFTI 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D+++        T + +E  L    IY ++++++A   ++L   +    +K
Sbjct: 170 GVVDMLARAKLESAVTYKFLEAYLTVGLIYWTITVILAFLQSKLENYVERPYQK 223


>gi|320325829|gb|EFW81890.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327253|gb|EFW83267.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 365

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 58/81 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+ L + ++  LV+LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMDLGYWRSMGLVILPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|229591696|ref|YP_002873815.1| putative ABC transporter ATP-binding protein [Pseudomonas
           fluorescens SBW25]
 gi|229363562|emb|CAY50838.1| putative ABC transport system, ATP-binding protein [Pseudomonas
           fluorescens SBW25]
          Length = 505

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 9/164 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIV 285
           +L   LP LVL+   Y L    P        G S V +  F S  +AL     A++AEI 
Sbjct: 62  WLFRSLPLLVLLIFIYNLPQALP--------GTSAVLADPFWSGLLALVICETAYVAEIH 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL+++P+GQ EAA ALGL        V++PQA+R  +P L ++Y++++K +SL   + 
Sbjct: 114 RGGLLSIPKGQGEAARALGLKFFGTQWRVVIPQALRVALPSLANEYISIVKLTSLVSVIS 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +++ VG  + +Q    IE +    F Y+ +  +    + RL 
Sbjct: 174 LTEILMVGQRLYSQNFLVIETMAAVAFFYVFIVTVFDFLLKRLE 217


>gi|218458510|ref|ZP_03498601.1| amino acid ABC transporter permease [Rhizobium etli Kim 5]
          Length = 229

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 68/119 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A GL+  K TR + LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +L+    YL+L+ +IA     L A++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAQVPVRR 229


>gi|148252818|ref|YP_001237403.1| amino acid ABC transporter membrane protein [Bradyrhizobium sp.
           BTAi1]
 gi|146404991|gb|ABQ33497.1| amino acid ABC transporter membrane protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 219

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP  ++ +I+LS Y  AF +EI+R G++++  GQ +A  ALG+      R +++PQ
Sbjct: 85  GVELSPA-VAAFISLSLYGGAFYSEIIRGGIVSIDPGQWDAGRALGMRRFDLMRRIVMPQ 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++ +IPPL +Q +  LKN+SL   +   DL+  G  I + T + +E   +   IY  + 
Sbjct: 144 ALKRMIPPLVNQAVLQLKNTSLLSVLAVPDLLYQGQLITSATYRPLETYTMIAVIYFIIL 203

Query: 379 IMIALFMNRLNAKIA 393
             +      L A++A
Sbjct: 204 FPMTRVARVLEARLA 218


>gi|262402084|ref|ZP_06078648.1| amino acid ABC transproter permease protein [Vibrio sp. RC586]
 gi|262351730|gb|EEZ00862.1| amino acid ABC transproter permease protein [Vibrio sp. RC586]
          Length = 223

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           T++  +   VF+ +L ++L+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TLEMASWGLVFALILALILANI-----RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    P+L   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|255526252|ref|ZP_05393169.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296186246|ref|ZP_06854650.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255510032|gb|EET86355.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296049047|gb|EFG88477.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 223

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 14/135 (10%)

Query: 220 PLL--YISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           PLL  YIS F   G P LV L  L Y L    P+L   N          + +  I LS  
Sbjct: 55  PLLKVYISFFR--GTPLLVQLFLLYYGLPQIIPILKNIN---------AYTAAIIGLSMN 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A++ EI+R  + +V +GQMEA  ALG+T  +  + ++LPQA R  IP L + +++LLK
Sbjct: 104 SSAYMVEILRGAIGSVDKGQMEAVKALGMTSWQGMKRIVLPQAARVAIPALGNTFVDLLK 163

Query: 337 NSSLAVAVGFADLVS 351
           +SSLA  +G A++++
Sbjct: 164 SSSLAFTLGVAEILA 178


>gi|304407618|ref|ZP_07389270.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304343569|gb|EFM09411.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 236

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 7/129 (5%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           YIA S    A+++E+VRSGL+AV +GQ+EAA A+G+T  +A R ++ PQA   ++P L++
Sbjct: 105 YIAFSITAGAYLSEVVRSGLLAVDKGQIEAAYAVGMTTTQAIRRIVFPQAFAILLPNLSN 164

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +++L  S+LA  V   D+ +    I +   +  E  +    IY  L+ +I     R+ 
Sbjct: 165 GTISMLHGSTLAFTVSVVDINAKSQIIASSNWKFFESYIAAAVIYWGLTFLI----ERMT 220

Query: 390 AKIALKEKK 398
              A+ EK+
Sbjct: 221 ---AMAEKR 226


>gi|297571711|ref|YP_003697485.1| polar amino acid ABC transporter inner membrane protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296932058|gb|ADH92866.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 222

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 62/103 (60%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+    A+ AE +RSGL AVPRGQ EA  +L +THR+    ++ PQA R  IPPL+S ++
Sbjct: 96  LALNAGAYTAEALRSGLKAVPRGQWEAGQSLNMTHRQILWSIVAPQAFRIAIPPLSSDFI 155

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +L+K +SL  ++   D+   G  +   T + + + +   FIYL
Sbjct: 156 DLVKGTSLVSSITLVDVFLRGQQLAAVTFEPLLLYVEVAFIYL 198


>gi|218198736|gb|EEC81163.1| hypothetical protein OsI_24129 [Oryza sativa Indica Group]
          Length = 180

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 34  FMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 93

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 94  LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 129


>gi|52144470|ref|YP_082358.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|301052511|ref|YP_003790722.1| amino acid ABC transporter permease [Bacillus anthracis CI]
 gi|51977939|gb|AAU19489.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|300374680|gb|ADK03584.1| amino acid ABC transporter, permease [Bacillus cereus biovar
           anthracis str. CI]
          Length = 232

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 33  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 87  FYGLPTLN-------VEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 47  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87


>gi|310641777|ref|YP_003946535.1| sulfur-containing amino acid abc transporter, permease protein tcyl
           [Paenibacillus polymyxa SC2]
 gi|309246727|gb|ADO56294.1| Sulfur-containing amino acid ABC transporter, permease protein TcyL
           [Paenibacillus polymyxa SC2]
          Length = 259

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 269 LYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           L+ A++ Y   + AFI+EI+RSG+ AV RGQ+EAA ++G++  +    ++LPQA+  ++P
Sbjct: 97  LWFAVATYALNSGAFISEIIRSGVGAVDRGQIEAAQSVGMSGYQTFTRIILPQALAVVVP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             ++  +  LK++SLA  +G  ++     T+ + T   +E  +   FIYL +S+++    
Sbjct: 157 VFSNLVIGNLKDTSLAFTIGAMEMTGKSQTLGSATQHFVETYIALSFIYLVISLIVQKLF 216

Query: 386 NRLNAKIALKEKK 398
             L   +   E +
Sbjct: 217 KVLENTLLRHEHR 229


>gi|290968268|ref|ZP_06559811.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781750|gb|EFD94335.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
          Length = 216

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 60/96 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IA     AA+ AEI R G+ ++ RGQ E A  LG+T+ +  R ++LPQ ++ +
Sbjct: 84  PPFGAAIIAFVLNYAAYFAEIFRGGIQSIGRGQYEGAKVLGMTYGQTMRRIVLPQVVKCV 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +PP+ ++ +NLLK++SL   +   D++ +  +I+ +
Sbjct: 144 LPPVANETINLLKDTSLVYILAMNDILRITRSIVQR 179


>gi|255326957|ref|ZP_05368033.1| glutamate transporter permease protein GluD [Rothia mucilaginosa
           ATCC 25296]
 gi|255296174|gb|EET75515.1| glutamate transporter permease protein GluD [Rothia mucilaginosa
           ATCC 25296]
          Length = 312

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 81/130 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+++ I L+ Y  + IAE++RSG+  +PRGQ EA +A+GLT  +    +LLPQA  +++P
Sbjct: 151 FIAVVIGLTLYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPTQTLIRILLPQAFTAMMP 210

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + SQ++ +LK+++L   + + +L++    I +  G  ++ +++   ++++++ ++    
Sbjct: 211 SMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQTLILAAALFVTVNFVLTAVA 270

Query: 386 NRLNAKIALK 395
             +  ++A +
Sbjct: 271 TGITDRLASR 280


>gi|152986188|ref|YP_001349726.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Pseudomonas
           aeruginosa PA7]
 gi|150961346|gb|ABR83371.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Pseudomonas aeruginosa PA7]
          Length = 222

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 70/123 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ AE++R  + +VPRGQ EAA+AL +T     R ++LPQA+   IPP T+ 
Sbjct: 91  LGLGLHIGAYGAEVMRGAIGSVPRGQYEAALALNMTPFTRFRRIVLPQALLCAIPPGTNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  +DL      +   T + ++I  + + +Y +++ +I   M RL  
Sbjct: 151 LIELLKNTSLVSLITLSDLAFRARQLDQATFETLKIFSLTLVLYFAMAQVIVFLMRRLER 210

Query: 391 KIA 393
           ++ 
Sbjct: 211 RLG 213


>gi|52144758|ref|YP_082070.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|51978227|gb|AAU19777.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
          Length = 217

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 69/120 (57%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS +    I EIVR  L ++P+GQ+EA  ++GL   +  + VL+PQA+R +IP   + +
Sbjct: 96  ALSLWGITEIGEIVRGALQSLPKGQVEAGKSIGLNKNQLYQYVLIPQAIRRMIPATINIF 155

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +++ +SL V +G  +++  G  I+ +TG+A  I       Y  L   ++++  +L  +
Sbjct: 156 IRIIQTTSLTVLIGVTEVIKAGQQIVERTGEAFLIYGCLFIFYFLLCYPLSIWSRKLETR 215


>gi|91786597|ref|YP_547549.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91695822|gb|ABE42651.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 229

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 71/123 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I++     AFIAEIVRSGL +V R Q +AA+ L  ++ +  RLV++PQA + I+PP+   
Sbjct: 102 ISVCLIATAFIAEIVRSGLESVHRNQWDAAVTLNFSYLQTLRLVIVPQAWKVILPPVFGF 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K+++LA  +G  +L   G  + N+   A  +    + +Y  LS  +A F   L  
Sbjct: 162 FVLFIKDTALASQIGVVELAFAGKAMNNKGFSAALVYGTVLALYFMLSYPLAHFGKYLER 221

Query: 391 KIA 393
           K+A
Sbjct: 222 KLA 224


>gi|255066834|ref|ZP_05318689.1| L-cystine ABC transporter, permease protein [Neisseria sicca ATCC
           29256]
 gi|255048909|gb|EET44373.1| L-cystine ABC transporter, permease protein [Neisseria sicca ATCC
           29256]
          Length = 227

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 56/90 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++ L KN+SLA  V   +L  V     N+T
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRT 189


>gi|257067440|ref|YP_003153695.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256558258|gb|ACU84105.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 369

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 118/226 (52%), Gaps = 20/226 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A      F LG+VL+L   RLS     K+     + +  +++    P LV + L 
Sbjct: 126 TLRLTAAAGAIGFGLGLVLALM--RLS-----KSSLISGVSWTFSWVFRSTPLLVQLLLW 178

Query: 242 YQLHF--DKPVLGQFNFIGG-------STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           Y L +  ++  LG   F G        S +    ++  + L  + AA+ AE++R G+++V
Sbjct: 179 YNLGYLYEQVSLG-IPFTGATFFEARTSDLMTPMLAAILGLGLHQAAYAAELIRGGILSV 237

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ+EAA ALG+  R  +  ++LPQAMR+I+PP  ++ + L+K +S+   +  A+L   
Sbjct: 238 DQGQLEAASALGIPARDRSLRIVLPQAMRAILPPAFNEIIGLVKGTSIVYVLAHAELFFT 297

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNAKIALK 395
              I  +T Q + ++L+    Y+ ++  +++   ++ R  +K AL+
Sbjct: 298 VQLIYGRTQQVLPMLLVATLWYVVITSALSVGQYYIERHFSKGALR 343


>gi|55378502|ref|YP_136352.1| amino acid ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
 gi|55231227|gb|AAV46646.1| amino acid ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
          Length = 326

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 109/207 (52%), Gaps = 12/207 (5%)

Query: 195 VLGIVLSLF-ATRLS--RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-- 249
           +LGI L  F A  LS  R +     ++L L Y  T L  G P   L+A  + L+F  P  
Sbjct: 117 LLGIALGFFIAVPLSVARVYGGTLTRSLALGY--TELFRGTP---LLAQLFVLYFATPLT 171

Query: 250 -VLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            ++ +   +G   +  + F    IA +  +AA+ +E +RS L +VP GQ+ AA ++GL+ 
Sbjct: 172 TIIRELPTVGAGFIPAQAFWVAVIAFTLNSAAYQSEYIRSALNSVPEGQLTAARSIGLSK 231

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R V+LPQ +R  IP  +++ + L+K SSLA  +   +L      I ++T +  E+ 
Sbjct: 232 VDGIRHVVLPQGLRYAIPGWSNELVYLIKYSSLASFITVRELFERTDAIASETYRYTELF 291

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++   +YL+L I  +L M  +  ++A+
Sbjct: 292 VLAGLLYLALVISASLVMEYVEDRVAI 318


>gi|83747887|ref|ZP_00944919.1| Hypothetical Protein RRSL_03143 [Ralstonia solanacearum UW551]
 gi|207739277|ref|YP_002257670.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725420|gb|EAP72566.1| Hypothetical Protein RRSL_03143 [Ralstonia solanacearum UW551]
 gi|206592650|emb|CAQ59556.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 250

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 2/139 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS VS  F ++   L  Y   +++E+VR+G+ A+P+GQMEAA ALG ++  A RLV+LPQ
Sbjct: 94  GSNVS-GFTTMVCTLVIYEGVYLSEVVRAGIEALPKGQMEAARALGHSYFGAMRLVILPQ 152

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSL 377
           A+ +++P + +Q+++ +K ++L   +   +L      I N    +  +I  +   IY  +
Sbjct: 153 ALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQIFFMLAVIYFVV 212

Query: 378 SIMIALFMNRLNAKIALKE 396
              +      L  +IA K 
Sbjct: 213 CWSLTRTARALEHRIAAKR 231


>gi|313498369|gb|ADR59735.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 178

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 79/136 (58%), Gaps = 1/136 (0%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP F++  I L+  T+A +AEI R  L AVP+GQ EA   LGL+  +    V++PQ +R 
Sbjct: 44  SP-FVAAIIGLALITSANMAEIYRGALSAVPKGQYEATKVLGLSTWQKYVHVIVPQVVRI 102

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P  ++  + LLK++++A  +G ++L  V   I  +T + + +  I   +Y ++S+ +A
Sbjct: 103 SVPAASTYCIGLLKDTAIASTIGVSELAQVANHISQETFRGLSVYAIAGLLYFAVSVFMA 162

Query: 383 LFMNRLNAKIALKEKK 398
           L   +L+  +  K ++
Sbjct: 163 LLSRQLDIHLRAKVER 178


>gi|293602702|ref|ZP_06685143.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818893|gb|EFF77933.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 229

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP---------TLVLIALKYQL 244
           F  G+  +L  T L+       G  L ++ +S F I  +P         ++ L+ + +  
Sbjct: 17  FQTGMTFTLTLTALAAVMGLALGTLLAMMRLSRFKILSVPAGIYVNVMRSIPLLLVIFWF 76

Query: 245 HFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +F  P +  +  +G  T      F S  I  + + AA+  EI+R+G+ ++ RGQ+ A++A
Sbjct: 77  YFLVPYIAAW-VVGSPTPLRVGAFNSAVITFTMFEAAYFCEIMRAGIQSIARGQVSASMA 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +  R V+LPQA R+++P L ++ + L +++SL   +   D +     I  + G+
Sbjct: 136 IGLTPWQGMRYVVLPQAFRNMVPALLTRVIILFQDTSLVYVLSLTDFLGAASKIGQRDGR 195

Query: 363 AIEIILIWMFIY 374
            +E+ L    +Y
Sbjct: 196 LVELYLFVAVVY 207


>gi|149191456|ref|ZP_01869706.1| arginine transporter permease subunit ArtQ [Vibrio shilonii AK1]
 gi|148834725|gb|EDL51712.1| arginine transporter permease subunit ArtQ [Vibrio shilonii AK1]
          Length = 230

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 1/135 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  IALS   A++ A+ +R  L AVP GQ EA  ALGL+  +    ++LPQA++
Sbjct: 87  VSP-FLAGVIALSLIFASYAAQTIRGALKAVPSGQREAGSALGLSRARVFFRIVLPQAVK 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLMKQAQLTSAATHEAFTWYATAAAIYLIITLIT 205

Query: 382 ALFMNRLNAKIALKE 396
              +  L+ K + KE
Sbjct: 206 QKAVKVLDKKFSSKE 220


>gi|118475005|ref|YP_892321.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118414231|gb|ABK82651.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 229

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 58/80 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG+ ++P+GQ EAA + G ++ +    ++LPQ+++ I+PP T+Q
Sbjct: 100 LGIGAYHGAYMSEVVRSGINSIPKGQFEAATSQGFSYIEQMMYIILPQSIKIILPPATNQ 159

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            +NL+KNSS+ + +  A+L+
Sbjct: 160 AVNLIKNSSVLLIIAGAELM 179


>gi|315289022|gb|EFU48420.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
          Length = 347

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 105 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 151

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 201 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 257 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296


>gi|191639757|ref|YP_001988923.1| ArpJ protein [Lactobacillus casei BL23]
 gi|190714059|emb|CAQ68065.1| ArpJ protein [Lactobacillus casei BL23]
 gi|327383870|gb|AEA55346.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei LC2W]
 gi|327387051|gb|AEA58525.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei BD-II]
          Length = 482

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 26/204 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  V+G +L+L   +LS   H    KA+  +YI    I G P LV     + + F   +L
Sbjct: 299 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 348

Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G     F+ G+          IA++  + A++AEI+R G+ +VP GQ EAA +LGL   +
Sbjct: 349 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 398

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365
           A R V+LPQA ++I P L ++++  +K SS+   +G  +L+  G  +   + +     + 
Sbjct: 399 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 458

Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389
           +++++  +  +LS ++ L   R N
Sbjct: 459 VVILYFIMTFTLSRLLRLIEKRFN 482


>gi|170693259|ref|ZP_02884419.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170141789|gb|EDT09957.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 605

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 4/144 (2%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N+     VSP F +  + L+ + AAF AE++R G+ +V +GQ+EAA ALGL   +  R +
Sbjct: 156 NWPTTEVVSP-FCAAVLGLTLHHAAFSAEVIRGGIQSVDQGQLEAAAALGLPRLRQARRI 214

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWM 371
           +LPQAMR+I+P   +  ++L K S++   +   +L      I  +  + I +++   +W 
Sbjct: 215 VLPQAMRAIVPTAFNDLISLAKGSAMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWY 274

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
            I LS+   I +++ R  ++ A +
Sbjct: 275 LIILSVLSAIQVYVERYFSRGATR 298


>gi|89899771|ref|YP_522242.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89344508|gb|ABD68711.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 222

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 14/180 (7%)

Query: 215 TGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           T  A PL +++   T  I G P LVL+   Y       +LG      G  +SP F +  +
Sbjct: 49  TYGAKPLRWMTRAYTDFIRGTPVLVLVLASYY------ILGA----AGVQLSP-FQAGVL 97

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+ + ++ + EIVR  L A+P GQ+EAA A+GLT  +    +LLPQA+R ++P   +  
Sbjct: 98  ALAVFCSSHVGEIVRGALQAIPVGQIEAAKAIGLTFSQTFLYILLPQAIRQVLPTWVNTA 157

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             ++K S+L   +G  DL+     +I++T  ++       F+Y + +  I  F   +  K
Sbjct: 158 AEMVKASTLLSIIGVGDLLLASQEVISRTFMSLPFYFFAGFLYFTANFAIEHFGRYVERK 217


>gi|16081000|ref|NP_391828.1| ABC transporter permease [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221311922|ref|ZP_03593769.1| hypothetical protein Bsubs1_21306 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221316246|ref|ZP_03598051.1| hypothetical protein BsubsN3_21217 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221321158|ref|ZP_03602452.1| hypothetical protein BsubsJ_21165 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325442|ref|ZP_03606736.1| hypothetical protein BsubsS_21316 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|1731314|sp|P54953|YXEN_BACSU RecName: Full=Probable amino-acid permease protein yxeN
 gi|1408499|dbj|BAA08330.1| yxeN [Bacillus subtilis]
 gi|2636495|emb|CAB15985.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 224

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 15/190 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L         H+     L  LYIS F   G+PTLV + L   +++  P L  F  
Sbjct: 38  GLILALITKNKIPVLHQ-----LSKLYISFFR--GVPTLVQLFL---IYYGLPQL--FPE 85

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +   T      +  I LS   AA++AEI R+ L +V  GQ+EA +++G+T  +A R ++L
Sbjct: 86  MSKMTA---LTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+ IP   + ++ LLK +SLA  +G  ++ + G    +   +  E  L    +Y  
Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWV 202

Query: 377 LSIMIALFMN 386
           L+I+ ++  +
Sbjct: 203 LTIIYSILQD 212


>gi|220904829|ref|YP_002480141.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869128|gb|ACL49463.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 225

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 62/104 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             +S  +A + + AA+ +EI+R+G+ +V RGQ  AA+ALG+T  +    V+LPQA R + 
Sbjct: 96  RLVSAMVAFTAFEAAYYSEIIRAGMNSVSRGQNYAALALGMTKSQTLIYVILPQAFRVMT 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           P L +Q + L ++++L   +G AD       I   TG  IE++L
Sbjct: 156 PLLLTQGVILFQDTALVYIIGLADFFRTATNIGKTTGYEIEMVL 199



 Score = 36.2 bits (82), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 32/58 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + T  +  + +I   ++GTL+   R+S    + W+   YV  FR+IP ++V+ + Y
Sbjct: 19  GILVTLKITITSIILGMVLGTLLAVARISIYAPLRWLAAAYVNCFRSIPLVMVLLWFY 76


>gi|153011343|ref|YP_001372557.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563231|gb|ABS16728.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 224

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 93/179 (51%), Gaps = 26/179 (14%)

Query: 193 SFVLGI------VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +F++GI      VLS     + R +  K  + L + YI  F    +P LV++ L Y   +
Sbjct: 27  TFLIGIASIFFGVLSGLLISIVRIYGPKVLRYLAIAYIDVFR--AMPVLVVLILIY---Y 81

Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P +G +F+          + S  ++ S   AA+ AE+ RSG+ +VPRGQ EAA ALG+
Sbjct: 82  ALPFIGIRFS---------AWTSAIMSFSMVMAAYSAEVFRSGIESVPRGQFEAASALGI 132

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
                   V+LPQA+R IIPP TS  +++ K+++LA  V   +L+        Q  QA+
Sbjct: 133 PFPVTLWKVVLPQAIRIIIPPTTSNCVSMFKDTALASTVALPELLKEA-----QDAQAL 186


>gi|261213265|ref|ZP_05927547.1| amino acid ABC transproter permease protein [Vibrio sp. RC341]
 gi|260837539|gb|EEX64242.1| amino acid ABC transproter permease protein [Vibrio sp. RC341]
          Length = 223

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 95/171 (55%), Gaps = 17/171 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIAL 240
           T++  +   VF+ +L ++L+       R F       L  LYIS F   G P LV L  L
Sbjct: 22  TLEMASWGLVFALILALILANI-----RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L    P+L   +          F +  I L+ + AA++AE +R+ +I + R QMEA+
Sbjct: 75  YYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEAS 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +G A++++
Sbjct: 126 LSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176


>gi|260429682|ref|ZP_05783658.1| ABC transporter, membrane spanning protein (amino acid)
           [Citreicella sp. SE45]
 gi|260419165|gb|EEX12419.1| ABC transporter, membrane spanning protein (amino acid)
           [Citreicella sp. SE45]
          Length = 231

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 13/168 (7%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y  T+LI G P LV + + Y      P +G +F+ +  +          I L    AA++
Sbjct: 59  YFYTWLIRGTPLLVQLIIIYT---GLPQIGIKFSVLEAT---------LIGLVMNEAAYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+RSG+ +VP+GQ  AA A+G+T  +  R V+ PQA R IIPPL +     LK +S+A
Sbjct: 107 SEIIRSGISSVPKGQSNAARAVGMTDVQMMRYVIAPQAARIIIPPLGNSVNGCLKTTSIA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +   +L+     +I +    +E+ ++    YL ++    L   R+ 
Sbjct: 167 SIISMEELLRRTQVLIQEKFMVLELFVVAALYYLLMTTAWDLIQRRIE 214


>gi|302537323|ref|ZP_07289665.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
 gi|302446218|gb|EFL18034.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
          Length = 296

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 82/141 (58%), Gaps = 5/141 (3%)

Query: 262 VSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           VS +F  +Y     L  Y A+ IAEIVR+G+ ++PRGQ +AA A+G+   +    VL+PQ
Sbjct: 134 VSSDFRPVYAVVTGLVLYNASVIAEIVRAGVQSLPRGQTDAAKAIGMRKGQTMVHVLIPQ 193

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           A+ +++P L SQ + +LK+++L  + +G  DL++    I       I  +++   IY+++
Sbjct: 194 AVTAMLPALVSQLVVILKDTALGGSLLGLTDLLAANRQISANYSNTIATLVVVALIYIAV 253

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           +  +  F + +  ++  K KK
Sbjct: 254 NFALTSFASWMEGRLR-KSKK 273



 Score = 36.2 bits (82), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 64  LSERAGFEIDQGIVPYTSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           + E+   + D+   P+ +D   ++T ++ G + T       M+ A  +G L+G GRLS +
Sbjct: 39  MGEKHQLDADK-WTPFVTDGRIWSTYLIPGLLETLKAGAIAMVIALPLGALLGMGRLSDH 97

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             V     V VE FR IP L+++ F Y   +  +P
Sbjct: 98  AWVRVPVGVVVEFFRAIPVLMLMMFGYAFFVRFIP 132


>gi|121597593|ref|YP_990724.1| glutamine ABC transporter permease protein [Burkholderia mallei
           SAVP1]
 gi|124382114|ref|YP_001025207.1| glutamine ABC transporter permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126443854|ref|YP_001064262.1| glutamine ABC transporter permease [Burkholderia pseudomallei 668]
 gi|126445790|ref|YP_001079561.1| glutamine ABC transporter permease protein [Burkholderia mallei
           NCTC 10247]
 gi|126458223|ref|YP_001077186.1| glutamine ABC transporter permease [Burkholderia pseudomallei
           1106a]
 gi|134281792|ref|ZP_01768499.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|166998959|ref|ZP_02264809.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|167744401|ref|ZP_02417175.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 14]
 gi|167821596|ref|ZP_02453276.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 91]
 gi|167829940|ref|ZP_02461411.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 9]
 gi|167851397|ref|ZP_02476905.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei B7210]
 gi|167908342|ref|ZP_02495547.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167916696|ref|ZP_02503787.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 112]
 gi|167924541|ref|ZP_02511632.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei BCC215]
 gi|226199275|ref|ZP_03794835.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|238563691|ref|ZP_00438452.2| glutamine ABC transporter, permease protein [Burkholderia mallei
           GB8 horse 4]
 gi|242313823|ref|ZP_04812840.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254177202|ref|ZP_04883858.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|254182415|ref|ZP_04889009.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254192463|ref|ZP_04898902.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254203623|ref|ZP_04909984.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|254205492|ref|ZP_04911845.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|254296638|ref|ZP_04964094.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|121225391|gb|ABM48922.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|126223345|gb|ABN86850.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126231991|gb|ABN95404.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|126238644|gb|ABO01756.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|134246854|gb|EBA46941.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|147745862|gb|EDK52941.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|147755078|gb|EDK62142.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|157806531|gb|EDO83701.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|160698242|gb|EDP88212.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|169649221|gb|EDS81914.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184212950|gb|EDU09993.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|225928682|gb|EEH24709.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|238520179|gb|EEP83641.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           GB8 horse 4]
 gi|242137062|gb|EES23465.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|243064781|gb|EES46967.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|261826656|gb|ABN00010.2| glutamine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
          Length = 235

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 17/186 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F++G++  +F     R +       L  +YI   LI G P +V +     L+F  P+L 
Sbjct: 50  GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 99

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                G S          +A++  + A++AE+VR  L+++P+G  EA +A+GL+  +   
Sbjct: 100 HVRIDGLSAA-------VVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 152

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ P A R +I PL +Q +  LK++SL + +G  +L   G  II    QA+EI      
Sbjct: 153 KIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 212

Query: 373 IYLSLS 378
           IYL L+
Sbjct: 213 IYLVLT 218


>gi|21492784|ref|NP_659859.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|21467209|gb|AAM54872.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 249

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 2/156 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T+   G P LV + L Y      P++ Q +F+      P F   +IA +  +AA   E+V
Sbjct: 57  TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVV 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVPRGQ+EAA ALGL+     RL++ P  +R  +P   ++ + +LK SSLA  + 
Sbjct: 115 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 174

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  +   ++++T    E+ +     YL L+++I
Sbjct: 175 LLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLI 210


>gi|330814717|ref|YP_004362892.1| hypothetical protein bgla_4p3090 [Burkholderia gladioli BSR3]
 gi|327374709|gb|AEA66060.1| hypothetical protein bgla_4p3090 [Burkholderia gladioli BSR3]
          Length = 505

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 7/146 (4%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL+   Y L    P    F       +S  F +  +AL    +A+IAEI R GL+ 
Sbjct: 68  LPLLVLLIFVYNLPQLLPATSGF-------LSDPFYAGLVALVANESAYIAEIHRGGLLG 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ EA  ALG+      RL++LPQA R  +P L ++++ ++K +SL   +  ++L+ 
Sbjct: 121 VPNGQHEAGRALGIGFLGRLRLIVLPQAFRIALPSLANEFITIVKLTSLVSVISLSELLL 180

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSL 377
           VG  +  Q  + ++ +L+    Y+++
Sbjct: 181 VGQRLYTQNFKVLDTLLVVAAFYVAI 206


>gi|282857095|ref|ZP_06266341.1| L-cystine transport system permease protein TcyB [Pyramidobacter
           piscolens W5455]
 gi|282585030|gb|EFB90352.1| L-cystine transport system permease protein TcyB [Pyramidobacter
           piscolens W5455]
          Length = 254

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 64/110 (58%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F ++ I LS   AA++ E +R  + +V +GQ EA I++G+T  +  R +++PQA R  +
Sbjct: 118 SFWAVVIVLSLSFAAYMGENIRGAISSVDKGQFEAGISIGMTPWQTIRRIVIPQAARVAV 177

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           P + + + NL K++SLA  VG  D+ S     +N T + +E  +  + IY
Sbjct: 178 PGMVNSFANLFKSTSLAFTVGVMDMTSCAKNEVNLTYRYLEGFIALLIIY 227


>gi|212695841|ref|ZP_03303969.1| hypothetical protein ANHYDRO_00374 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677166|gb|EEB36773.1| hypothetical protein ANHYDRO_00374 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 455

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 4/129 (3%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++ +I +S  T A+++E+VR G+ +V  GQ EA  ALG+TH +    V++PQ ++SI+P 
Sbjct: 314 LAAFIIVSINTGAYLSEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPA 373

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIA 382
           + ++++  +K++S+   +   +L  V  +I   T Q  +  LI   IY  L+     +I 
Sbjct: 374 IANEFVVNIKDTSVLNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFVTTRIIL 433

Query: 383 LFMNRLNAK 391
           L   RLN K
Sbjct: 434 LLERRLNNK 442


>gi|197117374|ref|YP_002137801.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197086734|gb|ACH38005.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem]
          Length = 339

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 25/182 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP+L                       G T  P F +  + L   
Sbjct: 183 RGTPLLLQLFFIYYGLPSL-----------------------GITFKP-FTAAILGLGLN 218

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++ EI+R G+ ++  GQMEAA A+G+++ +A R V++PQ  + ++PP+ ++++ L+K
Sbjct: 219 YSAYLGEIIRGGIQSIEHGQMEAAKAIGMSYWQAMRRVVIPQTYKRLMPPIGNEFIALIK 278

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++L   +   +L+     + N       +IL   FIYL  + +      ++  +  + E
Sbjct: 279 DTALVSTIAMVELMRSADQMFNAYFNVTALILA-AFIYLLFTTIFTFIFEKIEIRAGIYE 337

Query: 397 KK 398
            +
Sbjct: 338 NR 339


>gi|330686410|gb|EGG98010.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 229

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 75/136 (55%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN      + P  M   I  S +  A+++E ++ GL++V   Q+EAA  +GL++    R 
Sbjct: 85  FNTKMNPDMVPPLMIAAITFSLHATAYLSESIKGGLLSVDTKQIEAAQTVGLSNWNVYRR 144

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++ PQA    +P + +Q++ LLK +SLA AV   +++++   I N+  Q + +  +    
Sbjct: 145 IVFPQAFGYALPNIENQFIMLLKGTSLAFAVQVTEIMAISTEIANEGYQFVPVYTVAALF 204

Query: 374 YLSLSIMIALFMNRLN 389
           Y +L+I+I L  ++L 
Sbjct: 205 YWALAIIIELIFHKLE 220


>gi|313141609|ref|ZP_07803802.1| L-cystine transport system permease protein tcyM [Helicobacter
           canadensis MIT 98-5491]
 gi|313130640|gb|EFR48257.1| L-cystine transport system permease protein tcyM [Helicobacter
           canadensis MIT 98-5491]
          Length = 215

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 19/197 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   +LG++LSL      R +       L  LYIS F   G+P LV I L Y   +  P
Sbjct: 8   FILGAILGLILSLI-----RIYRVPILFQLATLYISFFR--GIPVLVQIFLAY---YGIP 57

Query: 250 -VLGQFNFIGGSTVSPE------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VL  FN   G  +         FM L  AL C  +A+++EI RS ++++ +GQ+EAA +
Sbjct: 58  LVLRYFNHQYGLNIDISGIDAIYFMYLVYALYC--SAYLSEIFRSSILSIDKGQLEAAYS 115

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+   +A  +++LPQ+M   +P + + ++ L+K +SL  A    +++ +     +++ +
Sbjct: 116 VGMNTTQALFIIILPQSMLLALPNILNFFIILIKETSLVFAASVPEIMGIATLEADRSSK 175

Query: 363 AIEIILIWMFIYLSLSI 379
            +E+ +I   IY  +SI
Sbjct: 176 FLEVYIIAALIYWVISI 192


>gi|22125569|ref|NP_668992.1| glutamine ABC transporter permease [Yersinia pestis KIM 10]
 gi|45442118|ref|NP_993657.1| glutamine ABC transporter permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51596868|ref|YP_071059.1| glutamine ABC transporter permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808000|ref|YP_651916.1| glutamine ABC transporter permease [Yersinia pestis Antiqua]
 gi|108812270|ref|YP_648037.1| glutamine ABC transporter permease protein [Yersinia pestis
           Nepal516]
 gi|145599205|ref|YP_001163281.1| glutamine ABC transporter permease protein [Yersinia pestis
           Pestoides F]
 gi|149365578|ref|ZP_01887613.1| putative glutamine transport system permease [Yersinia pestis
           CA88-4125]
 gi|153949155|ref|YP_001400472.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162420264|ref|YP_001606263.1| glutamine ABC transporter permease [Yersinia pestis Angola]
 gi|165925600|ref|ZP_02221432.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937741|ref|ZP_02226303.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008576|ref|ZP_02229474.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167399647|ref|ZP_02305171.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167422284|ref|ZP_02314037.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426964|ref|ZP_02318717.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170023840|ref|YP_001720345.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis
           YPIII]
 gi|218929602|ref|YP_002347477.1| glutamine ABC transporter permease [Yersinia pestis CO92]
 gi|229838047|ref|ZP_04458206.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895246|ref|ZP_04510420.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229898607|ref|ZP_04513752.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902606|ref|ZP_04517723.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270490213|ref|ZP_06207287.1| glutamine ABC transporter permease protein [Yersinia pestis KIM
           D27]
 gi|294504265|ref|YP_003568327.1| glutamine ABC transporter permease component [Yersinia pestis
           Z176003]
 gi|21958472|gb|AAM85243.1|AE013770_9 inner membrane permease [Yersinia pestis KIM 10]
 gi|45436981|gb|AAS62534.1| putative glutamine transport system permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590150|emb|CAH21787.1| ABC glutamine transporter, permease subunit glnP [Yersinia
           pseudotuberculosis IP 32953]
 gi|108775918|gb|ABG18437.1| glutamine transport system permease [Yersinia pestis Nepal516]
 gi|108779913|gb|ABG13971.1| putative glutamine transport system permease [Yersinia pestis
           Antiqua]
 gi|115348213|emb|CAL21141.1| putative glutamine transport system permease [Yersinia pestis CO92]
 gi|145210901|gb|ABP40308.1| glutamine transport system permease [Yersinia pestis Pestoides F]
 gi|149291991|gb|EDM42065.1| putative glutamine transport system permease [Yersinia pestis
           CA88-4125]
 gi|152960650|gb|ABS48111.1| glutamine ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353079|gb|ABX87027.1| glutamine ABC transporter, permease protein [Yersinia pestis
           Angola]
 gi|165914491|gb|EDR33106.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922709|gb|EDR39860.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992958|gb|EDR45259.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166958790|gb|EDR55811.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167052151|gb|EDR63559.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054066|gb|EDR63894.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750374|gb|ACA67892.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|229680053|gb|EEO76152.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229688155|gb|EEO80226.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694413|gb|EEO84460.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701732|gb|EEO89757.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262362384|gb|ACY59105.1| glutamine ABC transporter permease component [Yersinia pestis
           D106004]
 gi|262366308|gb|ACY62865.1| glutamine ABC transporter permease component [Yersinia pestis
           D182038]
 gi|270338717|gb|EFA49494.1| glutamine ABC transporter permease protein [Yersinia pestis KIM
           D27]
 gi|294354724|gb|ADE65065.1| glutamine ABC transporter permease component [Yersinia pestis
           Z176003]
 gi|320014657|gb|ADV98228.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 218

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 71/118 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++  G  EA +ALGL+ R     V+ P A+R ++PPL +Q++  +K
Sbjct: 100 SGAYIAEITRGAVLSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + RL  K+ +
Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217


>gi|126699791|ref|YP_001088688.1| amino-acid ABC transporter permease [Clostridium difficile 630]
 gi|255101313|ref|ZP_05330290.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|255307189|ref|ZP_05351360.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
 gi|115251228|emb|CAJ69059.1| ABC-type transport system,cystine/aminoacid-family permease
           [Clostridium difficile]
          Length = 220

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 96/179 (53%), Gaps = 21/179 (11%)

Query: 178 FPTLTMDTNAKI------FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           FPT+    N  +       VFS ++G +++L     S ++  K    +  +Y+S F   G
Sbjct: 12  FPTIMKSFNVTVILAISSLVFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--G 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P   L+   + L+F    +  F       + P F +  I LS    A+++E +R+ +++
Sbjct: 65  TP---LMPQLFFLYFGLAYMSDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +  GQ+EAA A+GLT+ +  + +++PQA+R  +P L + +++L+K SS+A  VG  D++
Sbjct: 117 IDTGQIEAAYAMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169
           Y         V ++ P+   SIVL   M
Sbjct: 75  YFGLAYMSDFVKNMDPVFATSIVLSLNM 102


>gi|325695482|gb|EGD37382.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
 gi|327472447|gb|EGF17878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|328944591|gb|EGG38752.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 228

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288
           P ++LI   Y L     +L Q F  +G      +F  LY A   Y   T   ++EI+RS 
Sbjct: 64  PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D
Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++     + + Q  E  L+   IYL +  +I      L  + AL
Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227


>gi|261823406|ref|YP_003261512.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607419|gb|ACX89905.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 369

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 61/95 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ + A + AE++R GL +VPRGQ EAA+AL L++   T  ++LPQA+R  +
Sbjct: 228 KLLRIIIGIALFFACYQAEVIRGGLQSVPRGQYEAAMALNLSYWHTTTKIILPQALRICL 287

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           P +T+  +  +KN+S  + +G  D+++   +++  
Sbjct: 288 PAMTNHIIAAMKNTSFVIIIGLFDILTATSSVMQD 322


>gi|297564129|ref|YP_003683102.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296848578|gb|ADH70596.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 242

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%), Gaps = 27/217 (12%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A  FV + V GI+ ++      RH+  +   A+  +Y+  F   G+  LVL+  
Sbjct: 21  LTLGGIALAFVLAMVFGIMGTI------RHWLPR---AVATVYVEVFR--GIAALVLM-- 67

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + + F  P L       G  ++  F ++ +A+     A+ AE+VRS + AVPR Q+EA 
Sbjct: 68  -FWMAFALPQLT------GYQLADNFAAI-LAVGLNLGAYGAEVVRSSINAVPRPQVEAT 119

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +AL L+  + TRLV+LPQA   ++P   +  + L+K ++++  +G ADL +V   +   T
Sbjct: 120 VALNLSWFQRTRLVVLPQAWAQMLPTFGNLNIELMKATAVSYLIGVADLTAVAQNMRQAT 179

Query: 361 GQAIEIILIWMFI--YLSLSIMI---ALFMNRLNAKI 392
           G+ + I  I  F+  YL   ++I    L   R N K+
Sbjct: 180 GETV-IAFIGAFVLYYLIAQVLILGMRLLERRANRKL 215


>gi|153010784|ref|YP_001371998.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562672|gb|ABS16169.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Ochrobactrum anthropi ATCC 49188]
          Length = 230

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 28/186 (15%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           T+T+   A  F  + VLG+V +L    L R               S + I   PT+V++ 
Sbjct: 28  TVTLKAAATGFAIALVLGLVFAL----LRR---------------SPYKIISWPTVVVV- 67

Query: 240 LKYQLHFDKPVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              +   D P+L Q  F+         V P F++  +AL    +A+ +E+ R G+ A+PR
Sbjct: 68  ---EFLRDTPLLVQLFFLYYVLPAYGIVLPAFLTGALALGLQYSAYTSEVYRGGIEAIPR 124

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA AL LT  +  R +++PQA+  IIP + +  +++LK + +   V   D++++  
Sbjct: 125 GQWEAARALNLTPWRTYRDIVIPQAIPRIIPAMGNYLVSMLKETPVLSVVSIVDMLNLAN 184

Query: 355 TIINQT 360
            I ++T
Sbjct: 185 LIGDRT 190



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 10/91 (10%)

Query: 80  TSDSSYATAIL----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +S  S+A +IL    +G   T   A +G   A ++G +    R S  K+++W   V VE 
Sbjct: 10  SSTLSFAISILPILGIGLTVTLKAAATGFAIALVLGLVFALLRRSPYKIISWPTVVVVEF 69

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
            R+ P LV +FFLY        +P + IVLP
Sbjct: 70  LRDTPLLVQLFFLYYV------LPAYGIVLP 94


>gi|309810990|ref|ZP_07704788.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308434954|gb|EFP58788.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 304

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 73/124 (58%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   +  F++  +AL  Y  A +AE++RSG+  +P GQ EA +++GLT  +  R +LLPQ
Sbjct: 131 GDNDNNPFIATVVALIIYNGAVVAEVIRSGVDQLPNGQREAGLSVGLTQTQTLRSILLPQ 190

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ +++P L SQ + +LK+++L   V + +++         +   + +I +   IY++L+
Sbjct: 191 AITAMMPTLISQLVVVLKDTALGYNVLYGEMLYKAKNAAVSSANIVPMIFVVALIYIALN 250

Query: 379 IMIA 382
             I+
Sbjct: 251 YTIS 254



 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 39/72 (54%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+   S++   IL G + T   A + M+ A + G +    R+S  + + W+  V VE+ R
Sbjct: 53  PFLEASTWQDYILPGLLGTLKAAGTAMVGAAVFGIVFAMARMSHVRPLRWVAGVIVELGR 112

Query: 138 NIPPLVVIFFLY 149
            +P L+++ F+Y
Sbjct: 113 AVPVLLMMLFVY 124


>gi|269955927|ref|YP_003325716.1| polar amino acid ABC transporter inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
 gi|269304608|gb|ACZ30158.1| polar amino acid ABC transporter, inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
          Length = 217

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 27/209 (12%)

Query: 193 SFVLGIVLSLFAT--RLSRH-FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           SF +G+V++L     RLS H      G+A    Y+S  LI G P LV +   + + +  P
Sbjct: 28  SFAIGLVIALGIALLRLSTHPVLSWLGRA----YVS--LIRGTPLLVQL---FVIFYGLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G         V   + S  +A S     + AE++R+ +++VP+GQ EAA  +G+    
Sbjct: 79  SIG--------VVIDPWPSAIVAFSLNVGGYAAEVMRAAILSVPQGQWEAAYTIGMRRTT 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA R  +PPL++ +++L+K++SLA  +  A+       I   T +       
Sbjct: 131 TLRRVVLPQAARVSVPPLSNTFISLVKDTSLASLILVAEAFRAAQVIAAATSE------- 183

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +M +YL ++++  LF   L+      E+K
Sbjct: 184 FMLLYLQVALVYWLFCTVLSFGQGRIERK 212


>gi|227432438|ref|ZP_03914426.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351804|gb|EEJ42042.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 222

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IA     AA++AEI R GL +VPRGQ +AA  LG +  +    ++LPQ ++ +
Sbjct: 91  PRFEAAIIAFIINYAAYLAEIFRGGLQSVPRGQYDAAKVLGFSKIQTFFKIILPQVIKIV 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   ++ +NL+K++SL   +G  D++  G    ++    +  +L+ + IYL ++ ++ L
Sbjct: 151 VPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRDVTLMPYLLVGL-IYLIMTAVVTL 209

Query: 384 FMNR 387
            + R
Sbjct: 210 LLRR 213


>gi|125974764|ref|YP_001038674.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum ATCC 27405]
 gi|256005224|ref|ZP_05430191.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 2360]
 gi|281418767|ref|ZP_06249786.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum JW20]
 gi|125714989|gb|ABN53481.1| amino acid ABC transporter membrane protein, PAAT family
           [Clostridium thermocellum ATCC 27405]
 gi|255990775|gb|EEU00890.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 2360]
 gi|281407851|gb|EFB38110.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum JW20]
 gi|316941898|gb|ADU75932.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 1313]
          Length = 236

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 76/122 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++EI+RSG+++V  GQMEA  ALGL++R     +++PQA+++I+P L ++++ L+K
Sbjct: 114 SGAYVSEIMRSGIMSVDHGQMEAGRALGLSYRVTMLKIVIPQAVKNILPTLGNEFIALIK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG ADL      I   + + +   L    IY++L ++IA  +  +  ++   +
Sbjct: 174 ETSVVSFVGAADLYVAFSYIGTNSYEFMVPYLAMALIYIALVMIIASLIKVMERRLRKSD 233

Query: 397 KK 398
           ++
Sbjct: 234 RR 235


>gi|301629485|ref|XP_002943870.1| PREDICTED: hypothetical protein LOC100490970 [Xenopus (Silurana)
           tropicalis]
          Length = 569

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 62/96 (64%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +   A +   AA+ AEI R+G+ +V RGQ EAA  LG+ + +A R ++LPQ +R+I
Sbjct: 85  PDFPAAVAAFALNYAAYFAEIFRAGIQSVERGQYEAAKVLGMNYGQAMRRIVLPQMVRNI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +PP++++ + L+K++SL   +   DL+     I+ +
Sbjct: 145 LPPMSNEAITLVKDTSLIYVLALNDLLRAARGIVQR 180


>gi|88856491|ref|ZP_01131149.1| putative ABC transporter permease [marine actinobacterium PHSC20C1]
 gi|88814358|gb|EAR24222.1| putative ABC transporter permease [marine actinobacterium PHSC20C1]
          Length = 340

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 56/77 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   +A++AEIVR+G+++V +GQ EAA ALG++  +    V++PQAMR IIPP  ++
Sbjct: 170 IGLALNESAYMAEIVRAGILSVDKGQDEAATALGMSWLQTMTRVVIPQAMRIIIPPTGNE 229

Query: 331 YLNLLKNSSLAVAVGFA 347
            +++LK +SL  A+ F+
Sbjct: 230 VISMLKTTSLVTAIPFS 246


>gi|116333854|ref|YP_795381.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099201|gb|ABJ64350.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 213

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 2/114 (1%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YTA F AEI R GL A+P GQ E+A  L LT  +  R +++PQ ++ ++P + ++ +NL+
Sbjct: 95  YTAYF-AEIFRGGLQAIPVGQYESARVLRLTRWQTLRRIVIPQVVKIVLPSIGNEVINLI 153

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           K+SSL   +G  DL+  G   +++    + ++L+ + IYL L+ +  + + RL 
Sbjct: 154 KDSSLVYVIGLGDLLRAGNVAMSRDVTLVPLVLVGV-IYLLLTAVCTIVLKRLE 206


>gi|325686599|gb|EGD28625.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 228

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288
           P ++LI   Y L     +L Q F  +G      +F  LY A   Y   T   ++EI+RS 
Sbjct: 64  PPILLILFFYSLF--PSLLNQIFKSLGSKVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D
Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++     + + Q  E  L+   IYL +  +I      L  + AL
Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227


>gi|317123398|ref|YP_004097510.1| amino acid ABC transporter permease [Intrasporangium calvum DSM
           43043]
 gi|315587486|gb|ADU46783.1| amino acid ABC transporter membrane protein, PAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 333

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 53/74 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA++AEI R+G+++V +GQ EAA ALG++  K  R ++LPQAMR I+PP  ++
Sbjct: 183 IGLGLSEAAYMAEIARAGILSVDKGQAEAAQALGMSSGKTMRRIVLPQAMRVIVPPTGNE 242

Query: 331 YLNLLKNSSLAVAV 344
            + ++K++SL  A+
Sbjct: 243 TIAMVKDTSLLTAI 256


>gi|300718192|ref|YP_003742995.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299064028|emb|CAX61148.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 221

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 18/202 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S + G  L+L   R +  +        PLL   + +  GLP LV+I   Y L+F   V
Sbjct: 29  IASLIAGSTLALLLMRAAPFWQ-------PLLRFYSSVTLGLPLLVVI---YLLYF---V 75

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L +++     T+S   + + +AL+ Y A +IA+++R+GL A+PRGQ EA+  LGL   + 
Sbjct: 76  LPEYDI----TLSSPVVGV-VALTLYYAPYIAQVLRAGLEALPRGQWEASRVLGLGRFRT 130

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V+LPQ +  ++ PL    + L+K+S+L   V   + +      I++T   +EI L  
Sbjct: 131 FSDVILPQTLPQMLSPLVGLLIGLIKDSALLSVVSVPEFMYAAKQAISETYAPLEIYLAV 190

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             IY  L  +I     R   ++
Sbjct: 191 ALIYWLLCSVIDHLARRAERRM 212


>gi|187732545|ref|YP_001881961.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family
           [Shigella boydii CDC 3083-94]
 gi|187429537|gb|ACD08811.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella boydii CDC 3083-94]
          Length = 367

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 61/96 (63%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + + + + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRVLVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|86357517|ref|YP_469409.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
 gi|86281619|gb|ABC90682.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 381

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 62/94 (65%), Gaps = 1/94 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV  + +   I +S + +A++AE++R GL A+P+GQ E A +LGL + +  RLV++PQ
Sbjct: 238 GWTVD-KLLRAVIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLVIMPQ 296

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           A++ +IP + + ++ + K++SL   +   DL+ +
Sbjct: 297 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 330


>gi|255023479|ref|ZP_05295465.1| L-cystine transport system permease protein TcyL [Listeria
           monocytogenes FSL J1-208]
          Length = 194

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 90/165 (54%), Gaps = 19/165 (11%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY-- 276
           L  +YIS F   G P +V +   + + +  P L     I  S + P    LY A++ Y  
Sbjct: 12  LARVYISFFR--GTPIMVQL---FIVFYGIPALSSIVGIDLSQMDP----LYAAIATYAL 62

Query: 277 -TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            +AA IAE++R+G+ +V  GQ EAA ++GL  R+    ++LPQA+   +P   +  +  L
Sbjct: 63  SSAATIAEVIRAGVNSVDAGQTEAAYSVGLNGRQTFLRIILPQALYQALPNFGNLVIGYL 122

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           K++SLA ++G  D+   G T+I  +  A+E       +Y+SLSI+
Sbjct: 123 KDTSLAFSIGVMDMSGRGQTLITLSNHALE-------VYISLSII 160


>gi|302873344|ref|YP_003841977.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|307688486|ref|ZP_07630932.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|302576201|gb|ADL50213.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
          Length = 216

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 78/131 (59%), Gaps = 1/131 (0%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  F+++ IA     AA+ AEI RSG+ ++P GQ EAA  LG T  +    ++LPQ ++ 
Sbjct: 84  SYRFIAVIIAFVLNYAAYFAEIYRSGIESIPVGQYEAAKVLGYTKSQTFFKIILPQVIKR 143

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PP+T++ + L+K++SLA  +   ++ +    +       + +++  +F Y+  ++++A
Sbjct: 144 ILPPVTNETITLVKDTSLAFVLSIVEMFTAAKQVAASGTTMMPLMVAGLFYYI-FNLLVA 202

Query: 383 LFMNRLNAKIA 393
           + M ++  K++
Sbjct: 203 IAMEQVEKKLS 213


>gi|294815490|ref|ZP_06774133.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|326443841|ref|ZP_08218575.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|294328089|gb|EFG09732.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
          Length = 292

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 21/197 (10%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RLS H   +    +P+  +  F    +P L+L+   YQ            F+  +T+  +
Sbjct: 93  RLSDHAWVR----IPVGAVVEFF-RAIPVLLLMVFAYQ-----------AFVQFTTIESD 136

Query: 266 FMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           F  +Y     L  Y A+ IAEIVR+G++++P GQ +AA A+G+   +A   VLLPQA+ +
Sbjct: 137 FRPMYAVITGLVLYNASVIAEIVRAGILSLPNGQTDAAKAIGMRKGQAMAHVLLPQAVTA 196

Query: 323 IIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIM 380
           ++P L SQ + ++K+++L  A +GF++L+     I  N     I  + +   I++ ++  
Sbjct: 197 MLPALVSQLVVIVKDTALGGALLGFSELLYQNRAITANYGANTIAALTVIALIFILVNFA 256

Query: 381 IALFMNRLNAKIALKEK 397
           +  F + L  +I   +K
Sbjct: 257 LTSFASWLEGRIRRGKK 273



 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119
           +G ++ER     ++   P+ +D+  + T +L G   T   A   M+ A  +G  +G GRL
Sbjct: 36  LGVMAERDQLASEK-WSPFVTDAKVWTTFLLPGLGETLKAAGISMLIALPLGAALGIGRL 94

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           S +  V       VE FR IP L+++ F Y++
Sbjct: 95  SDHAWVRIPVGAVVEFFRAIPVLLLMVFAYQA 126


>gi|330952973|gb|EGH53233.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 226

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 21/229 (9%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +LP+  FLN  G+   T T+      F+ + +LG  L+L   RLSRH   +T   +   Y
Sbjct: 13  MLPY--FLNVLGVGALT-TVGLTLAAFIVAALLGFFLALM--RLSRH---RTLGFIASCY 64

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F    +P L  +   + L+F    +G           P   +  I      AA ++E
Sbjct: 65  LEIFR--NIPILTQL---FILYFGLTYIG--------ITLPAVGAAIIGFGLNGAAILSE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + RS +  + +GQ EAA ++G+T   A R+++LPQA +  IP + +  + LLK++SLA A
Sbjct: 112 VFRSSIKTIDKGQAEAAYSIGMTRSMAMRIIVLPQAFKISIPGMANFAIGLLKDTSLASA 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               ++      ++++T Q   I  +   IYL+LS+ IA + +R   ++
Sbjct: 172 AAVPEMTFKAKMLVSETYQTNLIYFLLAIIYLALSLFIAYWASRTERRL 220



 Score = 43.1 bits (100), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           VG + T  L  +  I A ++G  +   RLS ++ + +I   Y+E+FRNIP L  +F LY
Sbjct: 23  VGALTTVGLTLAAFIVAALLGFFLALMRLSRHRTLGFIASCYLEIFRNIPILTQLFILY 81


>gi|323350546|ref|ZP_08086208.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123228|gb|EFX94913.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|324989768|gb|EGC21711.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
 gi|325688946|gb|EGD30954.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 228

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288
           P ++LI   Y L     +L Q F  +G      +F  LY A   Y   T   ++EI+RS 
Sbjct: 64  PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D
Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++     + + Q  E  L+   IYL +  +I      L  + AL
Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227


>gi|296116099|ref|ZP_06834718.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977356|gb|EFG84115.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 485

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 11/162 (6%)

Query: 193 SFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           S V  I++S+  A RL      K G    LL +  ++   +PTL+      QL F    L
Sbjct: 283 SHVTAIIISIPIALRLG----GKPGPVRALLGLYIYIFRAVPTLL------QLLFVWNAL 332

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF  I        F++ +I+LS   +A+ AEI RS L+AV  GQ+ AA ALG+   +  
Sbjct: 333 PQFCPIFREAWFSPFLAAWISLSLNESAYQAEINRSALVAVDAGQIAAARALGMGTGQTY 392

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R V+ PQA+R  +PP  + ++ LLK +SLA  +   +L+SV 
Sbjct: 393 RHVVFPQALRIALPPTLNDFITLLKTTSLASVISLHELLSVA 434


>gi|239635973|ref|ZP_04676990.1| L-cystine transport system permease protein TcyL [Staphylococcus
           warneri L37603]
 gi|239598438|gb|EEQ80918.1| L-cystine transport system permease protein TcyL [Staphylococcus
           warneri L37603]
          Length = 227

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 110/202 (54%), Gaps = 31/202 (15%)

Query: 191 VFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + + +LG++L++   +   +       ++   ++ PLL     + F LP  +LI   +Q+
Sbjct: 29  ILATILGLILTMIRIKQVPYLSTCVRVYQSFMRSTPLLLQLFLVYFALPQFLLI---FQI 85

Query: 245 ---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              HFD+                    + +A S ++AA+++E+ R+G ++V   Q+EA +
Sbjct: 86  NINHFDR-----------------LFFIILAFSLHSAAYLSEVFRAGYVSVDYRQIEAGL 128

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQT 360
           ++GL++ +  + +++PQA+R+ IP LT+Q + L+K++SLA  +G  D++     II N  
Sbjct: 129 SVGLSYPRILKDIIIPQALRNSIPNLTTQIIELIKDTSLAFTIGIIDMMGQVQLIIGNNY 188

Query: 361 GQA-IEIILIWMFIYLSLSIMI 381
           G   +E+ ++   IY  L+++I
Sbjct: 189 GLGMLEVYVVISIIYWLLALII 210


>gi|241666975|ref|YP_002985059.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862432|gb|ACS60097.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 213

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            ++++ I L+ + +A++ EI R  + AVPRGQ EAA AL L +    + V+LPQA+R  +
Sbjct: 81  SWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALSLRYISRMKDVILPQALRVSL 140

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P      + L+K +SLA  VGF +L   G  I NQ  Q + +  +   +Y  +   + + 
Sbjct: 141 PATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPLTVFGVVGILYFLMCCPLTIL 200

Query: 385 MNRLNAKIALKEK 397
             RL  + A   +
Sbjct: 201 GARLERRFAASAR 213


>gi|148560414|ref|YP_001259774.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148371671|gb|ABQ61650.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
          Length = 232

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 87/163 (53%), Gaps = 8/163 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL +IS+  +     +  I + Y   +  P +G           PE +   IAL+ + ++
Sbjct: 50  PLRWISSAYVEWFRNIPFIVVLYLFFYGLPFMG--------VRLPESIVGTIALAFFASS 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S
Sbjct: 102 YFAEIIRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +   +  A+L   G  I  +T    EI L    IY  ++ + A
Sbjct: 162 VLSTITVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFA 204


>gi|53715883|ref|YP_106604.1| glutamine ABC transporter permease protein [Burkholderia mallei
           ATCC 23344]
 gi|53723353|ref|YP_112338.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei K96243]
 gi|76817724|ref|YP_336643.1| glutamine ABC transporter permease [Burkholderia pseudomallei
           1710b]
 gi|254356207|ref|ZP_04972484.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|52213767|emb|CAH39822.1| glutamine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|52421853|gb|AAU45423.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|76582197|gb|ABA51671.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710b]
 gi|148025190|gb|EDK83359.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           2002721280]
          Length = 218

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 17/186 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F++G++  +F     R +       L  +YI   LI G P +V +     L+F  P+L 
Sbjct: 33  GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 82

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                G S       +  +A++  + A++AE+VR  L+++P+G  EA +A+GL+  +   
Sbjct: 83  HVRIDGLS-------AAVVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ P A R +I PL +Q +  LK++SL + +G  +L   G  II    QA+EI      
Sbjct: 136 KIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 195

Query: 373 IYLSLS 378
           IYL L+
Sbjct: 196 IYLVLT 201


>gi|309811071|ref|ZP_07704869.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308435035|gb|EFP58869.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 226

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 78/141 (55%), Gaps = 7/141 (4%)

Query: 263 SPEFMS------LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           SP+F +        I L+ Y AA++ E +RSG+  +P GQ EAA ++GLT  ++ R V+L
Sbjct: 86  SPDFFTSNNFRLAVIGLTVYHAAYVCEALRSGVNTIPLGQAEAARSIGLTFSQSLREVIL 145

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTGQAIEIILIWMFIYL 375
           PQA R  I PL +  + L KN+++AV +G  ++ ++   +  +  G   +        ++
Sbjct: 146 PQAFRGAIVPLGNALIALTKNTTVAVVIGVMEMAAMLAKVTEDDPGLLNQAFFASALAFV 205

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           +L++   L +  L  K+A+K 
Sbjct: 206 ALTLPTGLLVGYLGKKLAVKR 226


>gi|307299193|ref|ZP_07578994.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914989|gb|EFN45375.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 215

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 31/187 (16%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           +EK  +++P L I   + +G P +                       G   SP F ++ I
Sbjct: 47  YEKILRSIPELVILFLIFYGFPKI-----------------------GIRFSP-FAAVII 82

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L   ++A+ ++I R  + +V   QM AA +LG+T+ K    ++LPQA+R  +PP T+++
Sbjct: 83  GLGFRSSAYQSQIFRGAINSVSSAQMRAARSLGMTNLKGFINIVLPQAIRIALPPWTNEF 142

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +LK+SSLA A+G  +L+  GG II    +        M IYL++++M  +    +N  
Sbjct: 143 TIVLKDSSLAYALGVTELLRQGGYIIATKYEP-------MLIYLTVAVMYFIVTIAINKT 195

Query: 392 IALKEKK 398
           +   EK+
Sbjct: 196 LGSVEKR 202


>gi|90419716|ref|ZP_01227625.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335757|gb|EAS49505.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 226

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 90/170 (52%), Gaps = 14/170 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+ L  F T + R F  K   A+   Y+  + I G P LV +   + + +  P 
Sbjct: 28  ILSFAFGLSLG-FMTAVVRLFGPKPLAAIARFYV--WFIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         +   F +  I  +    A+ +EI+R+ L ++ +GQ EAA A+G+T  +A
Sbjct: 82  VG--------ILIDAFPAALIGFTLSVGAYTSEIIRAALSSINKGQWEAAYAIGMTRNQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +  ++PQA+R  +PPL++ +++L+K++SLA A+   +L      I+  T
Sbjct: 134 MKRTIVPQAVRVAVPPLSNSFISLVKDTSLAAAITVPELFQQAQRIVATT 183


>gi|325277399|ref|ZP_08143019.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324097472|gb|EGB95698.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 215

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 59/95 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +M+  IAL+ +T+AF+AE  R  + A+PRGQ EA+ +L +T  +  R V+LPQA+R  + 
Sbjct: 85  WMAAAIALTLFTSAFLAETWRGCVEAIPRGQWEASGSLAMTRLEQMRYVILPQALRIAVA 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P     + ++K +++   +GF +L   GG + N T
Sbjct: 145 PTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 179


>gi|228913540|ref|ZP_04077169.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846127|gb|EEM91149.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|324324900|gb|ADY20160.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 209

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 10  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 64  FYGLPTLN-------VEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 24  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64


>gi|15805592|ref|NP_294288.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6458260|gb|AAF10145.1|AE001914_7 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 226

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 18/218 (8%)

Query: 177 SFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           + PTL   T   +   + + VLG+ L  FA  L+R       + L  L++S   I G P 
Sbjct: 16  ALPTLLAATPVTLGFALAAMVLGLPLG-FAVALARLSRLGWLRTLSGLFVS--FIRGTPL 72

Query: 235 LVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           LV I   + +++  P LG QF+ + G           IAL+   AA+++E +R+ ++++P
Sbjct: 73  LVQI---FVIYYGLPSLGIQFSPVVGGV---------IALTLNAAAYLSETIRAAILSIP 120

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA +LGL+  +  RL++LPQA R  +P L++  + L+K++SL   +   +L+   
Sbjct: 121 PGQREAATSLGLSGAQTMRLIILPQAARVALPSLSNTLIGLVKDTSLVSVITVVELLRSA 180

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +I +T +     L    IY  +S ++ +    L  +
Sbjct: 181 QLVIARTFEPFGPYLAAALIYWLVSSLLEVVQRALERR 218


>gi|323698174|ref|ZP_08110086.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458106|gb|EGB13971.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 364

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 52/73 (71%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +++A+IAE+VR GL AVP GQ++AA ALGL+    T  V+LPQA+R ++P L  + + L 
Sbjct: 240 FSSAYIAEVVRGGLQAVPGGQLDAAKALGLSPWMITLFVVLPQALRYVLPALIGRCIALF 299

Query: 336 KNSSLAVAVGFAD 348
           K++SL + VG  D
Sbjct: 300 KDTSLVIIVGLLD 312


>gi|322834720|ref|YP_004214747.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169921|gb|ADW75620.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 357

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 231 FQSAYVAEVVRGGLQALPKGQTEAAESLALGYWKTQGLVILPQALKMVIPGLVNTIIALF 290

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 291 KDTSLVIIIGLFDLFS 306


>gi|229493104|ref|ZP_04386899.1| ABC-type amino acid transport system, permease component
           [Rhodococcus erythropolis SK121]
 gi|229320134|gb|EEN85960.1| ABC-type amino acid transport system, permease component
           [Rhodococcus erythropolis SK121]
          Length = 324

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 15/226 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLL 222
           N G  +PT      AK  + +  + I L+L+ T           L R       + +   
Sbjct: 54  NPGWDWPTFAQYFTAKSVLAALWMTIKLTLWGTILGFGLGVFLALGRLSKNPVLQVIAWT 113

Query: 223 YISTF----LIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           YI  F    LI  L     I   YQ L    P   +F     S V   F +  I L+ + 
Sbjct: 114 YIWAFRSIPLIVQLLFWFNITYLYQTLSLGIPFGPEFFTFQVSGVIGGFTAAVIGLALHQ 173

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI+RSG+I+V  GQ+EAA +LG+   +    ++LPQAMR+I+P   ++ + L K 
Sbjct: 174 AAYSAEIIRSGIISVDHGQIEAAHSLGIPRSRQFFKIVLPQAMRAILPNAANEVIGLFKG 233

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +S+   +  A+L      I  + G+ + ++++    Y+ L+ ++++
Sbjct: 234 TSIVSTMAIAELFYQVQVIFGRNGRVVPLLMVATIWYIILTTLLSI 279


>gi|91784321|ref|YP_559527.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|91688275|gb|ABE31475.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 265

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 22/193 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVL 251
           V+G+VL L              +ALPL  ++   I+   G P LV + L Y   F  P L
Sbjct: 45  VIGVVLGLSGMH----------RALPLRVLNQGYIWFFRGTPVLVQLVLIY---FGLPYL 91

Query: 252 GQFNF------IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             F+       +G   +S   ++  IA   + AA+++EI R+ + ++  GQMEAA+A+G+
Sbjct: 92  VGFDLFPAVMSLGPLHLSGALVAGVIAFGLHEAAYMSEITRASVGSIDPGQMEAALAVGM 151

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T   A R ++LPQA+  I+P L +Q+ N+LK ++L   +G +++  V   +   T    E
Sbjct: 152 TPAMAMRRIVLPQAVPLIVPALGNQFNNMLKTTALLSVIGVSEMFRVAEQMQAATFMTFE 211

Query: 366 IILIWMFIYLSLS 378
           + L     YL L+
Sbjct: 212 VYLGVSVYYLMLT 224


>gi|78213328|ref|YP_382107.1| amino acid ABC transporter permease [Synechococcus sp. CC9605]
 gi|78197787|gb|ABB35552.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. CC9605]
          Length = 324

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 3/116 (2%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE VR GL A+P  Q EAA  LGL+ R++ +LV+LPQA+R  +P LT+Q + LL+N+S
Sbjct: 202 YIAEDVRGGLQAIPPTQREAAAVLGLSPRQSLQLVVLPQALRVALPSLTNQAVGLLQNTS 261

Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +G  +L+ +  +++      G+ +E+ L    +Y      +AL    L  ++
Sbjct: 262 LMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMALLARHLEVQL 317


>gi|296104985|ref|YP_003615131.1| general L-amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059444|gb|ADF64182.1| general L-amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 367

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|307352566|ref|YP_003893617.1| polar amino acid ABC transporter inner membrane subunit
           [Methanoplanus petrolearius DSM 11571]
 gi|307155799|gb|ADN35179.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanoplanus petrolearius DSM 11571]
          Length = 236

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 80/140 (57%), Gaps = 11/140 (7%)

Query: 223 YISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +I+ F+ F  GLP LVL+ L Y         G F  +G   ++P F+   I L    AA+
Sbjct: 59  FIAVFVWFFRGLPILVLLFLFY--------FGIFPLMGMGDLAPFFVGA-IVLGLRGAAY 109

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            ++I R  + ++  GQM AA +LG+T   A + V+LPQ+ R  +P  +++Y N+L +S++
Sbjct: 110 QSQIFRGAIQSISEGQMTAARSLGMTKLSAIKNVILPQSFRIALPGWSNEYPNILTDSAV 169

Query: 341 AVAVGFADLVSVGGTIINQT 360
             A+G A+L++    I +QT
Sbjct: 170 CYAIGVAELLTRSSQIASQT 189


>gi|298717428|ref|YP_003730070.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361617|gb|ADI78398.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 308

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 78/137 (56%), Gaps = 3/137 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+   AA+ AEI+R G++ V  GQ+EAA ALGL+  + T  ++LPQA+R+II
Sbjct: 146 QFPAAVIGLTLVQAAYSAEIIRGGILGVDHGQVEAASALGLSASRRTFRIILPQALRAII 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381
           P   ++ ++L K +S+   +   +L      I N+  + I ++++   W  I  ++  +I
Sbjct: 206 PTAFNEIISLAKGTSMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 265

Query: 382 ALFMNRLNAKIALKEKK 398
             ++ R  A+   +E +
Sbjct: 266 QYYVERWLARSVNREPQ 282


>gi|282852733|ref|ZP_06262075.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|282556475|gb|EFB62095.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
          Length = 158

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 4/142 (2%)

Query: 253 QFNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            F F G  TV    P + +  +A     AA+ AEI R GL AVP GQ EAA  LGL+  +
Sbjct: 13  DFYFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLSRWQ 72

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++ PQ ++ + P + ++ +NL+K+SSL   +G  DL+  G     +    + ++L+
Sbjct: 73  TINRIVRPQVVKIVFPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPLVLV 132

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
              +YL+++ ++   +  +  K
Sbjct: 133 GC-VYLAMTAVLTALLRVVEKK 153


>gi|328885476|emb|CCA58715.1| glutamate permease [Streptomyces venezuelae ATCC 10712]
          Length = 296

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 66/96 (68%), Gaps = 4/96 (4%)

Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +T+S +F  LY     L  Y A+ IAE+VR+G++++PRGQ +AA ALG+   +    VLL
Sbjct: 131 TTISSDFRPLYAVVTGLVLYNASVIAEVVRAGVLSLPRGQGDAAEALGMRKGQTMTYVLL 190

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVS 351
           PQA+  ++P L SQ + ++K+++L  A +G+A+L+S
Sbjct: 191 PQAVTVMLPALVSQLVVIVKDTALGGALLGYAELLS 226



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 78  PYTSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           P+ +DS  + T +L G + T   A   ++ A  +G L+G GRLS ++ V       VE F
Sbjct: 52  PFVTDSRVWTTYLLPGLMETLKAAALSILIALPLGALLGIGRLSDHRWVRVPVGAVVEFF 111

Query: 137 RNIPPLVVIFF---LYKS 151
           R IP L+++ F   LY+ 
Sbjct: 112 RAIPVLLLMMFAAALYRE 129


>gi|167750328|ref|ZP_02422455.1| hypothetical protein EUBSIR_01302 [Eubacterium siraeum DSM 15702]
 gi|167656688|gb|EDS00818.1| hypothetical protein EUBSIR_01302 [Eubacterium siraeum DSM 15702]
 gi|291556411|emb|CBL33528.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium siraeum V10Sc8a]
          Length = 247

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 118/248 (47%), Gaps = 27/248 (10%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y+ +   L +    I+   G+ L N     PTL      KIF F+ +  I L L    L 
Sbjct: 4   YRKIKEELNMTGEQIMKVTGILLENL---IPTL------KIFGFTLLFSIPLGLIVAAL- 53

Query: 209 RHFHEKTGKALPLLYISTFLIF---GLP-TLVLIALKYQLHFDKPVL-GQFNFIGG--ST 261
                K  +  P+ +++   I    G P  L +I + Y L F K    G   F+    S 
Sbjct: 54  -----KMCRFKPISWLTNLYILIMRGTPLMLQIIVVYYALPFLKTATKGSGGFVESLLSG 108

Query: 262 VSPE-----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           V P      F  + IA     AA+ AEI R G+ ++PRGQ EAA ALG+T  +    ++L
Sbjct: 109 VDPAAESFMFTMVIIAFVLNYAAYFAEIFRGGIESIPRGQYEAAAALGMTKAQTFFRIIL 168

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ ++ I+P  +++ + L+K++SLA  V +++++      +      + + +  +F ++ 
Sbjct: 169 PQVIKRIVPASSNEVITLVKDTSLANVVAYSEIMLAAKQQMMNYSSLVPLFIAGVFYFVM 228

Query: 377 LSIMIALF 384
            +++ ALF
Sbjct: 229 ATVLTALF 236


>gi|88855456|ref|ZP_01130120.1| putative glutamate transporter permease [marine actinobacterium
           PHSC20C1]
 gi|88815363|gb|EAR25221.1| putative glutamate transporter permease [marine actinobacterium
           PHSC20C1]
          Length = 222

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 31/207 (14%)

Query: 193 SFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +FVLGI+++        A RL    + +  + +PLL +  F  + LP L        L F
Sbjct: 36  AFVLGILIATMRISPVPALRLFATVYTEILRNIPLLLVLFFCAYVLPIL-----GVDLDF 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F+   + L+ YT+ F+AE VRSG   VP GQ EAA ++G+ 
Sbjct: 91  -------------------FLLAALGLTLYTSPFVAEAVRSGFNGVPVGQAEAARSIGMG 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +   L++LPQA R ++PPL + ++ L KN+S+A      +L           G  + +
Sbjct: 132 FTQTVGLIILPQAGRMVVPPLINVFIALTKNTSVAGIFFVNELFKATYAAARDNGDVVVL 191

Query: 367 ILIW-MFIYLSLSIMIALFMNRLNAKI 392
            L++ + +YL++++ + L    +  K+
Sbjct: 192 TLVYAVALYLAITVPLGLIAGAIEKKV 218


>gi|226304942|ref|YP_002764900.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226184057|dbj|BAH32161.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 324

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 15/226 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLL 222
           N G  +PT      AK  + +  + I L+L+ T           L R       + +   
Sbjct: 54  NPGWDWPTFAQYFTAKSVLAALWMTIKLTLWGTILGFGLGVFLALGRLSKNPVLQVIAWT 113

Query: 223 YISTF----LIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           YI  F    LI  L     I   YQ L    P   +F     S V   F +  I L+ + 
Sbjct: 114 YIWAFRSIPLIVQLLFWFNITYLYQTLSLGIPFGPEFFTFQVSGVIGGFTAAVIGLALHQ 173

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI+RSG+I+V  GQ+EAA +LG+   +    ++LPQAMR+I+P   ++ + L K 
Sbjct: 174 AAYSAEIIRSGIISVDHGQIEAAHSLGIPRSRQFFKIVLPQAMRAILPNAANEVIGLFKG 233

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +S+   +  A+L      I  + G+ + ++++    Y+ L+ ++++
Sbjct: 234 TSIVSTMAIAELFYQVQVIFGRNGRVVPLLMVATIWYIILTTLLSI 279


>gi|89091827|ref|ZP_01164782.1| hypothetical protein MED92_06666 [Oceanospirillum sp. MED92]
 gi|89083562|gb|EAR62779.1| hypothetical protein MED92_06666 [Oceanospirillum sp. MED92]
          Length = 217

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 74/131 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  I LS YT AF+AE+ R G  +V    + A  +LG+T+ +  R V  P  +RS+
Sbjct: 87  PPFVAGTIILSLYTMAFMAEVFRGGFESVNNSMIIAGRSLGMTYWQTIRHVRFPIGLRSV 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P      L+++K+S+L   +G+ +L+     +I++T Q +EI++     Y  +S  +++
Sbjct: 147 FPAWLGVALSVIKDSALVSVIGYVELLRTSDQLISRTQQPLEILIGVGLFYFLISYPLSV 206

Query: 384 FMNRLNAKIAL 394
           +  R+  K AL
Sbjct: 207 YGRRIERKHAL 217


>gi|330503969|ref|YP_004380838.1| amino acid ABC transporter ATP-binding protein [Pseudomonas
           mendocina NK-01]
 gi|328918255|gb|AEB59086.1| amino acid ABC transporter ATP-binding protein [Pseudomonas
           mendocina NK-01]
          Length = 504

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 7/167 (4%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LVL+   Y L        Q     G  +S  F +   AL    AA++AEI R GL++
Sbjct: 67  VPLLVLLIFVYNL-------PQLMPASGKVLSNPFYAGLFALVLTEAAYMAEIHRGGLLS 119

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ EAA ALG+    A RL+++PQA R  +P LT++Y+ ++K +SL   +  ++L+ 
Sbjct: 120 VAKGQREAARALGIGRLGAQRLIVVPQAFRIALPTLTNEYVTIVKLTSLVSVISLSELLL 179

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG  +  Q    +E +      Y+ +  +    +  L   + L  +K
Sbjct: 180 VGQRLYAQNFLVLETLGAVAVYYVLIVSLFGWGLQHLERHLDLARRK 226


>gi|319784338|ref|YP_004143814.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170226|gb|ADV13764.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 385

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 59/88 (67%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+   I +S + AA++AE+VR GL A+P+GQ E A +LGL + +    +++PQA++ +I
Sbjct: 247 KFLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMYFIVMPQALKLVI 306

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P + + ++ + K++SL + +   DL+ +
Sbjct: 307 PGIVNTFIGMFKDTSLVIIISMFDLLGI 334


>gi|315605385|ref|ZP_07880428.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312954|gb|EFU61028.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 225

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +  A + ++VR  LIA+PR Q E+A ALGLT R+  R V+LPQ +R + PP  +    
Sbjct: 100 TLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMRRVILPQTLRRLAPPAVNLITR 159

Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358
           ++K +SL V +G  +++ VG  II+
Sbjct: 160 MIKTTSLVVLIGVVEVLKVGQQIID 184


>gi|294791036|ref|ZP_06756194.1| glutamate permease [Scardovia inopinata F0304]
 gi|294458933|gb|EFG27286.1| glutamate permease [Scardovia inopinata F0304]
          Length = 229

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 19/122 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSC 275
           K +PL  I  F++ G                  V GQ         +  F  L I  LS 
Sbjct: 65  KNMPLTIIMVFMVLG------------------VFGQLKLKFSDNFTINFFWLAITGLSL 106

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YTAAF++E +RSG+  +P GQ EAA ALGLT  ++TR +++PQA+R  + PL +  + LL
Sbjct: 107 YTAAFVSESLRSGINTIPVGQAEAARALGLTFMQSTRSIIMPQALRGSVAPLGNTLIALL 166

Query: 336 KN 337
           KN
Sbjct: 167 KN 168


>gi|254460499|ref|ZP_05073915.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206677088|gb|EDZ41575.1| amino acid ABC transporter, permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 431

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 1/91 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ ++AA+IAE+VR GL A+P+GQ EAA +LGL + ++ RL++LPQA++  IP + + 
Sbjct: 301 IMITMFSAAYIAEVVRGGLAALPKGQAEAAGSLGLDYAQSMRLIILPQALKISIPGIVNV 360

Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + L K++ L   +   DLV  + G I+  T
Sbjct: 361 AVGLFKDTVLVSVISMFDLVGMIRGPILAST 391


>gi|84499806|ref|ZP_00998094.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Oceanicola batsensis HTCC2597]
 gi|84392950|gb|EAQ05161.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Oceanicola batsensis HTCC2597]
          Length = 434

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 114/230 (49%), Gaps = 29/230 (12%)

Query: 158 IPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           IPD S ++P  +  + +R +    L +         S  +GIVL+L      R       
Sbjct: 204 IPDLSRIIPISLPEVPSRDMGGFMLNLILGTVCISLSLPIGIVLAL-----GRRSQMPLI 258

Query: 217 KALPLLYISTFLIFGLP--TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           K + +++I    I G+P  TL+ +A    L +  P    F+ I         + + I ++
Sbjct: 259 KWICVIFIE--FIRGVPLITLLFVA-NVVLAYFLPPGSNFDLI---------LRVIIMIT 306

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            + +A+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++  IP + +  + L
Sbjct: 307 MFASAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIPGIVNVAVGL 366

Query: 335 LKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            K+++L   +   D+V  + G I+  T         W  +Y  L I  AL
Sbjct: 367 FKDTTLVSVISMFDMVGMIRGPILASTD--------WNGVYWELFIFAAL 408


>gi|116695744|ref|YP_841320.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113530243|emb|CAJ96590.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 252

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 66/111 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA++    A+  EI+R+GL AV R Q+EAA ALG+T  +  R V L  A   + P LTSQ
Sbjct: 95  IAMTVNLGAYSTEIIRAGLQAVHRSQLEAAAALGMTRWQLIRHVALVPAFEKVYPALTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +  ++  SS+   +   +L +V   + +QT +  E  ++ MF+Y+ L++M+
Sbjct: 155 FTLMMLTSSVVSTISVEELTAVASQVDSQTFRTFESYILVMFVYIGLALML 205


>gi|150397301|ref|YP_001327768.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150028816|gb|ABR60933.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 376

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + +A++AE VRSGL AVPR Q EAA +LG++     R ++LPQA+R  +PPL   
Sbjct: 247 IGFTLFYSAYVAEYVRSGLQAVPREQTEAARSLGMSEFDINRSIVLPQALRVAVPPLVGN 306

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS---LSIMIALFMNR 387
            L++   + L   +G  D +  G  I+           ++ F++L+   +  +I     R
Sbjct: 307 VLDIFNTAPLVFIIGLTDFLRAGQMILANPQYGDRTYEVYAFLFLTYFLVGSLITFVARR 366

Query: 388 LNAKIALKEK 397
           L   +A   +
Sbjct: 367 LETHLARGNR 376



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 27/40 (67%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +G L+  GR S    + WIC  Y+EV R++P ++V+++++
Sbjct: 188 VGILLAFGRRSRFSSMRWICMGYIEVMRSVPLIMVVYWIW 227


>gi|313896660|ref|ZP_07830208.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312974577|gb|EFR40044.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 253

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 2/106 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+I+E+ R+   AVPRGQ EAA+  GL+  +A   V+LPQA    +P   +  +NLLK 
Sbjct: 111 GAYISEVFRAAYKAVPRGQYEAAVCAGLSPVQAFAHVMLPQAAIVALPNFGNASINLLKE 170

Query: 338 SSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMI 381
            SLA  +G  DL+  G  II Q      IEI L  M +Y ++ +++
Sbjct: 171 GSLAYTIGLIDLIGKGNLIIAQNFGAYGIEIYLACMLVYWAVVLLL 216


>gi|297202813|ref|ZP_06920210.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|297148210|gb|EFH28892.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 304

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 84/147 (57%), Gaps = 4/147 (2%)

Query: 256 FIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           ++  S +S E   LY     L  Y A+ +AEIVR+G++++PRGQ EAA A+GL   +   
Sbjct: 126 YVRSSDISSEQRPLYAVVTGLVLYNASVLAEIVRAGILSLPRGQTEAAYAVGLRKGQTMT 185

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
            +LLPQA+ +++P + SQ + ++K+++L  V + F +L++   T+       I   ++  
Sbjct: 186 SILLPQAVTAMLPAIVSQLVVIVKDTALGGVMLSFPELLNSRSTLAANYANVIPSFIVVG 245

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            I++ L+ ++  F + L  ++   +K 
Sbjct: 246 IIFIVLNFLLTSFASWLEQRLRRSKKS 272



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+T+  ++ T +L G  NT   A   M+ A  +G + G  R+S +  V  +    VE FR
Sbjct: 52  PFTTGEAWTTYLLPGLGNTLKAAAISMVIALPLGAVFGIARMSDHAWVRGVAGTVVEFFR 111

Query: 138 NIPPLVVIFF 147
            IP L+++ F
Sbjct: 112 AIPVLLLMLF 121


>gi|210623571|ref|ZP_03293897.1| hypothetical protein CLOHIR_01847 [Clostridium hiranonis DSM 13275]
 gi|210153441|gb|EEA84447.1| hypothetical protein CLOHIR_01847 [Clostridium hiranonis DSM 13275]
          Length = 219

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 80/129 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  I LS  ++A++AE +R+ + ++ +GQMEA+ ++G+T+ ++   ++LPQA+R  I
Sbjct: 85  SFYAALIILSLASSAYMAESLRAAITSIHKGQMEASQSIGMTYMQSMYHIILPQAIRVAI 144

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L S ++N++K++SL  A+G  ++++      + + + +E  +  + IY  ++ ++   
Sbjct: 145 PTLFSSFINIVKDTSLVFAIGVKEMMAQAQLEGSSSYKYLEAFVCVLLIYWMITSIMTFV 204

Query: 385 MNRLNAKIA 393
            +RL  K+ 
Sbjct: 205 QSRLEKKMG 213


>gi|299541860|ref|ZP_07052183.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725598|gb|EFI66239.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 235

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 2/106 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA ++E++RS  +A+P+GQ EAA+++GLT  +A R ++ PQA+   +P   +  + LL+ 
Sbjct: 109 AAIMSEVIRSAYLAIPKGQFEAAVSVGLTPFQAYRRIIFPQALVVALPNFGNGMIALLQE 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMI 381
            +LA  +G  D+V     II  N    A+EI +    IY  LSI+I
Sbjct: 169 GALAYTIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIII 214


>gi|296501588|ref|YP_003663288.1| cystine transport system permease [Bacillus thuringiensis BMB171]
 gi|296322640|gb|ADH05568.1| cystine transport system permease protein [Bacillus thuringiensis
           BMB171]
          Length = 232

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 33  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 87  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 139 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 175



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 47  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 87


>gi|327480953|gb|AEA84263.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           stutzeri DSM 4166]
          Length = 222

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+ AEI+R+ + ++ RGQ EAA ++G+   +     +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYTAEILRAAIASIDRGQWEAAASIGMGRAQTLYRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ ++A F  RL  
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWLLASVLAYFQGRLEH 213

Query: 391 KIALKEKK 398
           ++   E+ 
Sbjct: 214 RVNRHEQD 221


>gi|330882634|gb|EGH16783.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 365

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 57/81 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+ L + ++  LV LPQA++ +IP + + 
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMDLGYWRSMGLVFLPQALKMVIPGIVNT 294

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K++SL + +G  DL++
Sbjct: 295 FIALFKDTSLVIIIGLFDLLN 315


>gi|324992502|gb|EGC24423.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324995968|gb|EGC27879.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|325697414|gb|EGD39300.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
 gi|327460726|gb|EGF07061.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327488810|gb|EGF20609.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 228

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288
           P ++LI   Y L     +L Q F  +G      +F  LY A   Y   T   ++EI+RS 
Sbjct: 64  PPILLILFFYSLF--PSLLNQIFKNLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D
Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++     + + Q  E  L+   IYL +  +I      L  + AL
Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227


>gi|16801503|ref|NP_471771.1| hypothetical protein lin2441 [Listeria innocua Clip11262]
 gi|16414963|emb|CAC97668.1| lin2441 [Listeria innocua Clip11262]
          Length = 235

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I+L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAILLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  F     +    +   P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 81  IVDFLSKSLDLSISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSMGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA  + +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|293193554|ref|ZP_06609824.1| amino acid ABC transporter, permease protein [Actinomyces
           odontolyticus F0309]
 gi|292819910|gb|EFF78912.1| amino acid ABC transporter, permease protein [Actinomyces
           odontolyticus F0309]
          Length = 225

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +  A + ++VR  LIA+PR Q E+A ALGLT R+  R V+LPQ +R + PP  +    
Sbjct: 100 TLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMRRVILPQTLRRLAPPAVNLITR 159

Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358
           ++K +SL V +G  +++ VG  II+
Sbjct: 160 MIKTTSLVVLIGVVEVLKVGQQIID 184


>gi|222102596|ref|YP_002539635.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
 gi|221739197|gb|ACM39930.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
          Length = 230

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 76/128 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  TAA+ +EI+R  +  VPRG +EAA ALG++     R ++LP A+R  IP   ++
Sbjct: 102 LALTLNTAAYGSEILRGAIRNVPRGLIEAASALGMSRLANLRFIILPLALRQAIPAYGNE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K +SLA  +   ++  +   +I+Q+ +AIE+ +    IYL L+ +I   +  L A
Sbjct: 162 IILMVKGTSLASIITLMEVTGIAQGLISQSYRAIEVFMAAGAIYLLLNFIIVRALTTLEA 221

Query: 391 KIALKEKK 398
           ++ L   +
Sbjct: 222 RLTLYRTR 229


>gi|308178222|ref|YP_003917628.1| polar amino acid ABC transporter inner membrane and binding protein
           subunit [Arthrobacter arilaitensis Re117]
 gi|307745685|emb|CBT76657.1| polar amino acid ABC transporter, inner membrane and binding
           protein subunit [Arthrobacter arilaitensis Re117]
          Length = 489

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 65/104 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS    A++AEIVR G+ +V  GQ+EA+ +LGL + K+ + V++PQA + + P L +Q
Sbjct: 366 LTLSLNAGAYVAEIVRGGIQSVDPGQLEASRSLGLGYGKSMQKVVIPQAFKMMTPSLINQ 425

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            +  LK+SSL +A+GF +L+  G  I     +  E +LI   IY
Sbjct: 426 LIISLKDSSLLLAIGFTELLYQGQQIYAANFRVTETLLIVGIIY 469


>gi|295099883|emb|CBK88972.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium cylindroides T2-87]
          Length = 186

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 56/82 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+S  + A+  E++RSG+  V +GQ EA   LGL+  +  +LV+LPQA + I+PP+ S+
Sbjct: 102 IAMSINSGAYSTELIRSGINGVDKGQWEACETLGLSSWQTMKLVILPQAFKLIVPPVISE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L+K+SSL   +G  +L+ +
Sbjct: 162 FITLIKDSSLTSCIGAIELLKL 183


>gi|260221678|emb|CBA30483.1| hypothetical protein Csp_C23770 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 271

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 110/209 (52%), Gaps = 20/209 (9%)

Query: 185 TNAKIFVFSFVL----GIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIF-G 231
           T   + V SF L    G++L+L A+R S+H   + G        + LP L I  ++ F G
Sbjct: 49  TTVYVAVISFTLAASIGLLLAL-ASR-SKHVWLRQGARFYIEVIRGLPALVILLYVTFVG 106

Query: 232 LPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            P LV +   YQ   +  +  ++   +    VS     + +AL+   +AF+AE+ R+GL 
Sbjct: 107 APALVNL---YQWACEGWIAKEWLPDVQVRDVSNTVRGI-VALALAYSAFLAEVFRAGLQ 162

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V R Q+EAA A+GL      RLV+ PQA+R ++P L + ++ ++K+SSL   +G  D+ 
Sbjct: 163 SVERAQIEAAQAIGLNRWLTFRLVVWPQAVRRVLPVLGNDFIAMVKDSSLVSVLGVNDIT 222

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            +G    + +   +E   +   +YL L++
Sbjct: 223 QLGKLYASSSFLTVETYNVVAVLYLMLTV 251


>gi|42780022|ref|NP_977269.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42735940|gb|AAS39877.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 234

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 35  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 89  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 141 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 177



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 49  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 89


>gi|116617692|ref|YP_818063.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096539|gb|ABJ61690.1| amino acid ABC transporter membrane protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 213

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 1/124 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IA     AA++AEI R GL +VPRGQ +AA  LG +  +    ++LPQ ++ +
Sbjct: 82  PRFEAAIIAFIINYAAYLAEIFRGGLQSVPRGQYDAAKVLGFSKIQTFFKIILPQVIKIV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   ++ +NL+K++SL   +G  D++  G    ++    +  +L+ + IYL ++ ++ L
Sbjct: 142 VPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRDVTLMPYLLVGL-IYLIMTAVVTL 200

Query: 384 FMNR 387
            + R
Sbjct: 201 LLRR 204


>gi|299069324|emb|CBJ40590.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CMR15]
          Length = 248

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 11/171 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L+LI   Y   F  P+     FIG       F ++   L  Y   +++E+VR
Sbjct: 69  YVVRGVPLLMLILWVY---FLVPL-----FIGRDVSG--FATMLCTLVIYEGVYLSEVVR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQMEAA ALG ++  A R+V+LPQA+ +++P + +Q+++ +K ++L   +  
Sbjct: 119 AGIEALPKGQMEAARALGHSYLGAMRVVILPQALYNMLPSMLAQFVSTIKETTLGYVINV 178

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +L      I N    +  +I  +   IY ++   +      L  +IA K 
Sbjct: 179 PELTFAANQINNALLSKPFQIFFLLAVIYFAVCWSLTRAARALEHRIAAKR 229


>gi|227877816|ref|ZP_03995840.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus crispatus JV-V01]
 gi|256850694|ref|ZP_05556118.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           MV-1A-US]
 gi|227862577|gb|EEJ70072.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus crispatus JV-V01]
 gi|256712465|gb|EEU27462.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           MV-1A-US]
          Length = 217

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFV+G++L L      ++     G      + LPLL I  F  FGLP L           
Sbjct: 34  SFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIFFTYFGLPQL----------- 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G   +P   S+  AL  +  A +AEIVRSG+ +V  GQME A + G++
Sbjct: 83  ------------GIVTNPTTASI-AALVIFEGAMLAEIVRSGIGSVDSGQMEGARSNGMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           + +A   V++PQA+ ++I  L SQ+++L+K++SLA  +   +L+     I +Q T   I 
Sbjct: 130 YGQAMYHVIMPQALHNMISALLSQFVSLVKDTSLATIIVLPELLYHAQIIYSQNTTYLIP 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +I   +Y  +   ++   N L  K
Sbjct: 190 MYVIIAIMYFIVCFCLSTIANYLQKK 215


>gi|146282695|ref|YP_001172848.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           stutzeri A1501]
 gi|145570900|gb|ABP80006.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           stutzeri A1501]
          Length = 222

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+ AEI+R+ + ++ RGQ EAA ++G+   +     +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYTAEILRAAIASIDRGQWEAAASIGMGRAQTLYRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ ++A F  RL  
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWLLASVLAYFQGRLEH 213

Query: 391 KIALKEKK 398
           ++   E+ 
Sbjct: 214 RVNRHEQD 221


>gi|229126284|ref|ZP_04255302.1| Amino acid ABC transporter [Bacillus cereus BDRD-Cer4]
 gi|229137673|ref|ZP_04266278.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST26]
 gi|229195190|ref|ZP_04321965.1| Amino acid ABC transporter [Bacillus cereus m1293]
 gi|228588419|gb|EEK46462.1| Amino acid ABC transporter [Bacillus cereus m1293]
 gi|228645788|gb|EEL02017.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST26]
 gi|228657276|gb|EEL13096.1| Amino acid ABC transporter [Bacillus cereus BDRD-Cer4]
          Length = 207

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 8   TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 62  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 22  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62


>gi|218507774|ref|ZP_03505652.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli Brasil 5]
          Length = 338

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 62/94 (65%), Gaps = 1/94 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV  + +   I +S + +A++AE++R GL A+P+GQ E A +LGL + +  RL+++PQ
Sbjct: 195 GWTVD-KLLRAIIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLIIMPQ 253

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           A++ +IP + + ++ + K++SL   +   DL+ +
Sbjct: 254 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 287


>gi|73662246|ref|YP_301027.1| truncated ABC-type amino acid transport system periplasmic
           component [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494761|dbj|BAE18082.1| truncated ABC-type amino acid transport system periplasmic
           component [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 398

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 59/80 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    +A+IAEI+R+G+ AV  GQ EAA +LGLT+ +  + V+LPQA+++I+P L ++
Sbjct: 273 IALVINCSAYIAEIIRAGINAVDSGQTEAARSLGLTYGQTMKSVILPQAIKNILPALGNE 332

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ ++K SS+   +G ++++
Sbjct: 333 FVTVIKESSIVSVIGVSEIM 352



 Score = 36.6 bits (83), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 38/74 (51%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y    L G  NT  ++  G++  T+ G  +   +LS  KL++W+   Y+E  R  P L
Sbjct: 188 TKYGNFFLKGIQNTILISIVGVLLGTVFGAGIALLKLSKIKLLSWLASAYIEFLRGTPLL 247

Query: 143 VVIFFLYKSVLSVL 156
           V +F +Y    +VL
Sbjct: 248 VQVFLVYFGTTAVL 261


>gi|300817472|ref|ZP_07097688.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300824984|ref|ZP_07105083.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300925984|ref|ZP_07141807.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|301326286|ref|ZP_07219659.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|300417928|gb|EFK01239.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300522550|gb|EFK43619.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529770|gb|EFK50832.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300846987|gb|EFK74747.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|323183030|gb|EFZ68429.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 1357]
 gi|324020753|gb|EGB89972.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
          Length = 347

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|255656163|ref|ZP_05401572.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
          Length = 223

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 91/160 (56%), Gaps = 15/160 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS ++G +++L     S ++  K    +  +Y+S F   G P   L+   + L+F    
Sbjct: 31  VFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--GTP---LMPQLFFLYFGLAY 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F       + P F +  I LS    A+++E +R+ ++++ +GQ+EAA A+GLT+ + 
Sbjct: 81  MSDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILSIDKGQIEAAYAMGLTNLQT 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            + +++PQA+R  +P L + +++L+K SS+A  VG  D++
Sbjct: 136 MKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169
           Y         V ++ P+   SIVL   M
Sbjct: 75  YFGLAYMSDFVKNMDPVFATSIVLSLNM 102


>gi|212711636|ref|ZP_03319764.1| hypothetical protein PROVALCAL_02711 [Providencia alcalifaciens DSM
           30120]
 gi|212685738|gb|EEB45266.1| hypothetical protein PROVALCAL_02711 [Providencia alcalifaciens DSM
           30120]
          Length = 250

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 80/138 (57%), Gaps = 1/138 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T  P   ++  AL+  T+A++A  V++G++A+ +GQ  A ++LG    +    V+LPQA
Sbjct: 90  GTEIPGVTAVVCALALITSAYLAHGVKAGILAIGQGQWNAGLSLGFNRWQVLWNVVLPQA 149

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLS 378
           +R ++P   +Q++ L+K++SLA  VG A+L  +   + N+     +E+ L   FIY  + 
Sbjct: 150 LRMMVPSFINQWVALIKDTSLAYIVGVAELSFLATQVNNREMIYPLEVFLFVAFIYFVMC 209

Query: 379 IMIALFMNRLNAKIALKE 396
           + + +  N++  K++ K 
Sbjct: 210 LSVEILANQVAKKLSDKR 227


>gi|210624308|ref|ZP_03294312.1| hypothetical protein CLOHIR_02268 [Clostridium hiranonis DSM 13275]
 gi|210153092|gb|EEA84098.1| hypothetical protein CLOHIR_02268 [Clostridium hiranonis DSM 13275]
          Length = 221

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 75/127 (59%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I+++  ++AFI EI+R GL+AV +GQ EAA+++GL   +    V++PQA  SI+P 
Sbjct: 92  VSFVISVALNSSAFIVEILRGGLLAVDKGQREAALSIGLNKFQVMTQVVIPQAFVSILPS 151

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L + ++  +KN+++A  +G  +++S    +  +    +E  +    +Y  L + I L  N
Sbjct: 152 LGNTFVGAVKNTAIAFTIGVVEILSESKILAARGFNYMEAYIAAGIVYWILILAIDLVQN 211

Query: 387 RLNAKIA 393
           RL  ++ 
Sbjct: 212 RLEKRVC 218


>gi|126724901|ref|ZP_01740744.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium
           HTCC2150]
 gi|126706065|gb|EBA05155.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium
           HTCC2150]
          Length = 431

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 59/87 (67%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + I ++ ++AA+IAE+VR GL A+P+GQ EA  +LGL + +A RL++LPQA++  IP
Sbjct: 296 FLRVVIMITLFSAAYIAEVVRGGLAALPKGQYEAGDSLGLDYPQAMRLIILPQALKISIP 355

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + +  + L K++ L   +   DL+ +
Sbjct: 356 GIVNIAVGLFKDTVLVSVISMFDLIGM 382


>gi|50085185|ref|YP_046695.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter
           sp. ADP1]
 gi|49531161|emb|CAG68873.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 233

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 73/123 (59%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E +R+G+  V  GQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 103 ALGLYTAARVSEHIRAGINTVSSGQKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEA 162

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 163 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLVITYTIKFIMAWIEKR 222

Query: 392 IAL 394
           +A+
Sbjct: 223 MAV 225



 Score = 43.1 bits (100), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           G V   W A +  + A  +G+L+G  R   NK +A I   YVE+FRNIP +V +FF
Sbjct: 7   GVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFF 62


>gi|327190792|gb|EGE57860.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 359

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 62/94 (65%), Gaps = 1/94 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV  + +   I +S + +A++AE++R GL A+P+GQ E A +LGL + +  RL+++PQ
Sbjct: 216 GWTVD-KLLRAIIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLIIMPQ 274

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           A++ +IP + + ++ + K++SL   +   DL+ +
Sbjct: 275 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 308


>gi|282932376|ref|ZP_06337807.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 208-1]
 gi|297206408|ref|ZP_06923803.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus jensenii JV-V16]
 gi|281303490|gb|EFA95661.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 208-1]
 gi|297149534|gb|EFH29832.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus jensenii JV-V16]
          Length = 225

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S  T A+ +E +R+ + +VP+ Q EAA ++GLT+RK    V+ PQA+R  IPPL++ 
Sbjct: 101 LTFSLNTGAYASETIRASISSVPQDQWEAAYSIGLTYRKVLSRVIFPQAVRIAIPPLSNS 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SLA ++   ++  V   I +   Q        M +Y  ++I+ A+F + L+ 
Sbjct: 161 FIGLVKDTSLASSITLVEMFMVSQEIASHNYQP-------MIMYSIVAIIYAIFCSLLSL 213

Query: 391 KIALKEKK 398
                E++
Sbjct: 214 LQLYLERR 221


>gi|199597488|ref|ZP_03210917.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229552063|ref|ZP_04440788.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258508265|ref|YP_003171016.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258539477|ref|YP_003173976.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|199591511|gb|EDY99588.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229314580|gb|EEN80553.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257148192|emb|CAR87165.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257151153|emb|CAR90125.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259649583|dbj|BAI41745.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 218

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 13/178 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+   A   V +  LG++LS+      +    K GK+L   Y+  F   G P L
Sbjct: 12  LSGVKMTLGIFAITLVGAIPLGLILSVGLIPKPKSLLGKAGKSLLEGYVWVFR--GTPLL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +     + +  P++G         V   F +  +A     AA+ AEI R G  A+  G
Sbjct: 70  LQLMF---IFYGLPIIG--------IVFDRFSAALVAFILNYAAYFAEIFRGGFGAIDEG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           Q EA+  L +T  +A R V++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G
Sbjct: 119 QFEASTVLNMTRWQALRFVVIPQVVKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAG 176


>gi|163856320|ref|YP_001630618.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii DSM 12804]
 gi|163260048|emb|CAP42349.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii]
          Length = 217

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 89/165 (53%), Gaps = 11/165 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P +VL+   + ++F  P +G    I  + V    + L IA S Y A    E  R+G+ 
Sbjct: 64  GIPIIVLL---FYIYFVMPDMG----IALTAVQAAIIGLGIAYSAYQA----ENFRAGIE 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ RGQ+EAA+A+G++     R V+LPQA++ ++PP  +  + +LK+SS A  +  A+L 
Sbjct: 113 AIDRGQVEAAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELA 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             G  I   T +   +  +   +YL + + + LF+  L  + A K
Sbjct: 173 LQGKLIAVSTFKNATVFSLVALMYLVMCVPLILFVRHLEKRSAAK 217


>gi|116254671|ref|YP_770507.1| putative transmembrane ABC transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259319|emb|CAK10454.1| putative transmembrane ABC transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 591

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + ++ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAMRSI+P
Sbjct: 165 FAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 224

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K++S+   +   +L      I  +  + I +++   +W  I +++  +  
Sbjct: 225 TGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSIAQ 284

Query: 383 LFMNRLNAKIALK 395
            ++ R  +K A++
Sbjct: 285 RYIERYFSKGAVR 297


>gi|300313167|ref|YP_003777259.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075952|gb|ADJ65351.1| ABC-type amino acid transport system, permease protein
           [Herbaspirillum seropedicae SmR1]
          Length = 216

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 24/205 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FVF  V G V++L+  R+S +      + +   YI   ++ G+P LV++ + Y       
Sbjct: 27  FVFGGVAGFVIALW--RVSPN---AVLRGIASGYIQ--VVQGIPLLVILFVAY------- 72

Query: 250 VLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               F   I G  ++P  ++  I+ + Y AAF+ EI R  + AVP+ Q EA+  LG    
Sbjct: 73  ----FGLAIAGFKLTP-LVAAGISFAIYCAAFLGEIWRGCIQAVPKTQWEASECLGFNRF 127

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII- 367
           +    V+LPQA++   PP     + ++KN+SLA  +GF DL   G  I N T Q   +  
Sbjct: 128 EQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGFVDLSRAGQIINNSTFQPFTVFG 187

Query: 368 ---LIWMFIYLSLSIMIALFMNRLN 389
              LI+  +   LS +   F  +LN
Sbjct: 188 CVALIYFCLCFPLSALSKHFERKLN 212


>gi|30019028|ref|NP_830659.1| cystine transport system permease protein [Bacillus cereus ATCC
           14579]
 gi|29894570|gb|AAP07860.1| Cystine transport system permease protein [Bacillus cereus ATCC
           14579]
          Length = 234

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 35  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 89  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 141 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 177



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 49  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 89


>gi|300904466|ref|ZP_07122312.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|301304261|ref|ZP_07210375.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|309793851|ref|ZP_07688277.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|300403628|gb|EFJ87166.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300840387|gb|EFK68147.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|308122808|gb|EFO60070.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|315257198|gb|EFU37166.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
          Length = 347

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|300898042|ref|ZP_07116413.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300358261|gb|EFJ74131.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
          Length = 347

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 51/289 (17%)

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           F+ ER G +   G+ P+        A+L+G V+         I       L   GR    
Sbjct: 59  FIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPNRGR---- 104

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
                    Y+ V+  I PL+V + +Y   L +  +               R     TLT
Sbjct: 105 ---------YIAVWAVIYPLIVWWLMYGGFLGLERV-------------ETRQWGGLTLT 142

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +   +     +   GI+L+L      R  H    + L +++I  +   G+P   LI + +
Sbjct: 143 LIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLF 192

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P+     F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +
Sbjct: 193 MSSVMLPL-----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAES 247

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 248 LALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296


>gi|298290458|ref|YP_003692397.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926969|gb|ADH87778.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 219

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 66/114 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL  ++AAF+ EI R  + +V RGQ EA+ +LG+ + +  R V+LPQA+R  
Sbjct: 84  PAWLAAGLALILWSAAFLTEIWRGCVESVARGQWEASSSLGMGYVQQMRHVILPQALRVA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           IPP     + ++K ++L   +GF +L   G  + N T +  ++  +   IY  L
Sbjct: 144 IPPTVGFSVQVVKGTALTSIIGFVELSKAGTVVTNATFEPFKVYGLVALIYFCL 197


>gi|239982700|ref|ZP_04705224.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 297

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 24/179 (13%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   + +  LG V  +   RLS H   +    +P   +  F    +P L+L+   
Sbjct: 70  TLKAAALSMIIALPLGAVFGI--ARLSDHAWVR----IPAGTVVEFF-RAIPVLILMVFA 122

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +L+               +V P+   LY     L  Y A+ +AEIVR+G++++P GQ E
Sbjct: 123 NELY-------------SGSVEPDVRPLYAVVTGLVLYNASVLAEIVRAGILSLPSGQAE 169

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTI 356
           A  A+GL   +  R +LLPQA+ +++P + SQ + ++K+++L  A +GF +L+   GT+
Sbjct: 170 AGRAIGLRKSQTMRFILLPQAVTAMLPAIVSQLVVIVKDTALGGAMIGFTELLRSRGTM 228



 Score = 39.7 bits (91), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 22/134 (16%)

Query: 19  LYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           LYD      +  N+ V ++ A+ L     W V+ +    +K +L        E A ++  
Sbjct: 5   LYDTPGPRAKARNLIVSVVFAVALAAGVWWLVSALG---DKGHL--------EWAKWK-- 51

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
               P+T  SS+   +L G  NT   A   MI A  +G + G  RLS +  V       V
Sbjct: 52  ----PFTESSSWTVYLLPGLGNTLKAAALSMIIALPLGAVFGIARLSDHAWVRIPAGTVV 107

Query: 134 EVFRNIPPLVVIFF 147
           E FR IP L+++ F
Sbjct: 108 EFFRAIPVLILMVF 121


>gi|209693641|ref|YP_002261569.1| putative amino-acid ABC transporter, permease protein [Aliivibrio
           salmonicida LFI1238]
 gi|208007592|emb|CAQ77692.1| putative amino-acid ABC transporter, permease protein [Aliivibrio
           salmonicida LFI1238]
          Length = 223

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 12/144 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R F       L  LYIS F   G P LV L  L Y L    P+     F+G       F 
Sbjct: 44  RVFKVPVLDQLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPI-----FVGLDA----FS 92

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L+ + AA++AE +R+ +I V R QMEA++++G+T  +A R ++LPQA R  +P L
Sbjct: 93  AAVIGLTLHFAAYMAESIRAAIIGVDRSQMEASLSIGMTTSQAMRRIILPQATRIALPSL 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVS 351
            + +++++K++SLA  +G +++++
Sbjct: 153 MNYFIDMIKSTSLAFTLGVSEIMA 176


>gi|209547542|ref|YP_002279460.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538786|gb|ACI58720.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 65/114 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  + L+ ++AAF+AEI R  + ++ R Q EA+ +LG+   +  R V+LPQA+R  
Sbjct: 84  PAWLAAGLTLTLWSAAFLAEIWRGCVESIARSQWEASASLGMGRLQQMRYVILPQALRVA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           IPP     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L
Sbjct: 144 IPPTVGFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL 197


>gi|206975732|ref|ZP_03236644.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217958459|ref|YP_002337007.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|218232526|ref|YP_002365642.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|228938118|ref|ZP_04100738.1| Amino acid ABC transporter [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970993|ref|ZP_04131630.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977596|ref|ZP_04137988.1| Amino acid ABC transporter [Bacillus thuringiensis Bt407]
 gi|228984046|ref|ZP_04144235.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229042723|ref|ZP_04190463.1| Amino acid ABC transporter [Bacillus cereus AH676]
 gi|229108461|ref|ZP_04238078.1| Amino acid ABC transporter [Bacillus cereus Rock1-15]
 gi|229143577|ref|ZP_04272002.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST24]
 gi|229149192|ref|ZP_04277433.1| Amino acid ABC transporter [Bacillus cereus m1550]
 gi|206746194|gb|EDZ57589.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217067339|gb|ACJ81589.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|218160483|gb|ACK60475.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|228634391|gb|EEK90979.1| Amino acid ABC transporter [Bacillus cereus m1550]
 gi|228639933|gb|EEK96338.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST24]
 gi|228675088|gb|EEL30315.1| Amino acid ABC transporter [Bacillus cereus Rock1-15]
 gi|228726663|gb|EEL77880.1| Amino acid ABC transporter [Bacillus cereus AH676]
 gi|228775726|gb|EEM24103.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228782240|gb|EEM30426.1| Amino acid ABC transporter [Bacillus thuringiensis Bt407]
 gi|228788802|gb|EEM36744.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821603|gb|EEM67608.1| Amino acid ABC transporter [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938619|gb|AEA14515.1| cystine transport system permease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 209

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 10  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 64  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 115

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 116 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 152



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 24  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 64


>gi|148284121|ref|YP_001248211.1| amino acid ABC transporter permease protein [Orientia tsutsugamushi
           str. Boryong]
 gi|146739560|emb|CAM79290.1| amino acid ABC transporter permease protein [Orientia tsutsugamushi
           str. Boryong]
          Length = 208

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 99/180 (55%), Gaps = 23/180 (12%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           L+N  L  P +T+        F FV+ ++L++  +R+S++   K G  +   YIS F   
Sbjct: 5   LSNIALGIP-VTLQYAFSAVCFGFVIAVLLTV--SRMSKYKLLKFGANI---YISVFR-- 56

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ + + Y           F+F     +S  F +  +  S  + A++AEI++SG+ 
Sbjct: 57  GTPLIIQLYVIY-----------FSF----KLSNVFYAGVLVFSLNSGAYVAEIIKSGIN 101

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V + Q+EAA+AL + +    + ++LPQA+R IIP L ++ +NLLK SS+   +G  DL+
Sbjct: 102 SVDKWQIEAALALNIPYFYIMKDIVLPQALRKIIPSLVNEVINLLKESSIISVLGGMDLM 161


>gi|323178549|gb|EFZ64125.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 1180]
          Length = 347

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 201 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 260

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 261 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296


>gi|242241101|ref|YP_002989282.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133158|gb|ACS87460.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 362

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 8/107 (7%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA AL L + +   LV+LPQA++ +IP L +  + L 
Sbjct: 236 FQSAYVAEVVRGGLQALPKGQYEAAQALALGYWRMQGLVILPQALKLVIPGLVNTIIALF 295

Query: 336 KNSSLAVAVGFADLV-SVGGTIINQT-------GQAIEIILIWMFIY 374
           K++SL + +G  DL  S+    ++ T       G     IL W+F +
Sbjct: 296 KDTSLVIIIGLFDLFSSIQQATVDPTWLGMSTEGYVFAAILYWIFCF 342


>gi|323357719|ref|YP_004224115.1| amino acid ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323274090|dbj|BAJ74235.1| ABC-type amino acid transport system, permease component
           [Microbacterium testaceum StLB037]
          Length = 344

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 12/172 (6%)

Query: 232 LPTLVLIALKYQLHFDKPVLG-------QFNFIGGSTVS--PEFMSLYIALSCYTAAFIA 282
           +P +V I + Y L +  P LG        F  +   TV     F +  + L  + AA+ A
Sbjct: 127 VPLVVQIIVWYNLGYLYPTLGLGTPFTTDFWIVEFPTVQLVSAFAAAILGLGLHQAAYSA 186

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R GL++V  GQ EAA ALG+   +    ++LPQAMRSI+P  T++ + L+K +S+  
Sbjct: 187 EIIRGGLVSVDPGQHEAAAALGIPASRRLFRIILPQAMRSIVPNATNEVIGLVKGASVVF 246

Query: 343 AVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
            +   +L      + N+  + I ++L   +W  I  ++  +   ++ R  A+
Sbjct: 247 VIAIPELFYAVQVVYNRNSRVIPLLLVAVVWYTIITTILSVAQYYIERHYAR 298


>gi|296450403|ref|ZP_06892159.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296879474|ref|ZP_06903468.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296260664|gb|EFH07503.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296429620|gb|EFH15473.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 220

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 91/160 (56%), Gaps = 15/160 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS ++G +++L     S ++  K    +  +Y+S F   G P   L+   + L+F    
Sbjct: 31  VFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--GTP---LMPQLFFLYFGLAY 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F       + P F +  I LS    A+++E +R+ ++++ +GQ+EAA A+GLT+ + 
Sbjct: 81  MSDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILSIDKGQIEAAYAMGLTNLQT 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            + +++PQA+R  +P L + +++L+K SS+A  VG  D++
Sbjct: 136 MKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169
           Y         V ++ P+   SIVL   M
Sbjct: 75  YFGLAYMSDFVKNMDPVFATSIVLSLNM 102


>gi|326315079|ref|YP_004232751.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323371915|gb|ADX44184.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 217

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  VSP + +  I L+ YT+A++AE+ R  + A+PRGQ EA+ +L + + +  R V+L
Sbjct: 79  MAGFDVSP-WTAAAIGLTLYTSAYLAEVWRGCVQAIPRGQWEASSSLAMGYFQQMRHVVL 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PQA+R  I P     + ++K +++A  +GF DL  +G  + N T Q
Sbjct: 138 PQAVRLAIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSMLANATFQ 183


>gi|268318927|ref|YP_003292583.1| hypothetical protein FI9785_433 [Lactobacillus johnsonii FI9785]
 gi|262397302|emb|CAX66316.1| unnamed protein product [Lactobacillus johnsonii FI9785]
          Length = 214

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 17/194 (8%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQL 244
             +IF ++ V+ I L L       H   K  KA+   Y+  ++I G P L+ LI + Y L
Sbjct: 19  TTEIFFWTTVVSIPLGLLVA-FGLHSKLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P +G         V P + +  +A     AA+ AEI R GL AVP GQ EAA  LG
Sbjct: 76  ----PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLG 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G     +    +
Sbjct: 124 LSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLV 183

Query: 365 EIILIWMFIYLSLS 378
            ++L+   +YL+++
Sbjct: 184 PLVLV-GCVYLAMT 196


>gi|83592120|ref|YP_425872.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575034|gb|ABC21585.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 367

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 56/76 (73%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +TA+++AEI+R+GL A+P GQ EAA +LGL +    RLV+LPQA+R +IP + +  + +L
Sbjct: 242 FTASYLAEIIRAGLQAIPPGQYEAARSLGLGYGLTMRLVVLPQALRLVIPSIVTLAIGIL 301

Query: 336 KNSSLAVAVGFADLVS 351
           ++++L   +G  DL+S
Sbjct: 302 QDTTLVAVIGIHDLLS 317


>gi|221196380|ref|ZP_03569427.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221203052|ref|ZP_03576071.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221176986|gb|EEE09414.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221182934|gb|EEE15334.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 593

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F +  + L+   AAF AE++R G+++V +GQ+EAA ALGL H + T  ++LPQAMR
Sbjct: 165 ISP-FAAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMR 223

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 224 AILPTAFNDLIVLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 283

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 284 SAIQVQVERHYARGALR 300


>gi|54025808|ref|YP_120050.1| putative glutamate transporter [Nocardia farcinica IFM 10152]
 gi|54017316|dbj|BAD58686.1| putative glutamate transporter [Nocardia farcinica IFM 10152]
          Length = 223

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 52/87 (59%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           +   G S     +    + LS YTAAF+ E +RSG+  VP GQ EA  +LG +  +  RL
Sbjct: 81  WKLAGDSIADNNYRWAIVGLSVYTAAFVCESLRSGINTVPLGQSEAGRSLGFSFSQNLRL 140

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           V+LPQA RS+I PL S  + L KNS++
Sbjct: 141 VVLPQAFRSVIAPLGSVLIALTKNSTI 167



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 37/74 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y + IL  F  T  L     + A I+GT+V A R+S   +  W+   YV +FRN P  
Sbjct: 6   SEYDSQILQAFWVTIKLTLFSAVGALILGTIVAAMRVSPIPVARWLGTAYVTIFRNTPLT 65

Query: 143 VVIFFLYKSVLSVL 156
           ++I F    + S L
Sbjct: 66  LIIVFCSLGLYSAL 79


>gi|330952972|gb|EGH53232.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae Cit 7]
          Length = 215

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 20/162 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V   V+G+VL+L     +R       +    +YI  F   G P LV +   + ++F   
Sbjct: 29  LVIGLVVGLVLAL-----ARRSSSAPLRRAASIYIEVFR--GTPALVQL---FIIYFSLT 78

Query: 250 VLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            +G +F+          F++  I L    AA++AEI R+GL AVP+GQ+EAA A+G+   
Sbjct: 79  AVGIEFS---------SFIAAIIGLGLNAAAYLAEIYRAGLEAVPKGQVEAAKAIGMPRG 129

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +  R V+LPQA+R ++ P+ +  ++LLK++S+A  +   DL+
Sbjct: 130 QVMRWVVLPQAIRIVLAPIGNVAISLLKDTSVASLIAAPDLM 171


>gi|325067176|ref|ZP_08125849.1| amino acid ABC transporter membrane protein [Actinomyces oris K20]
          Length = 291

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 65/100 (65%), Gaps = 1/100 (1%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +T+S +F  L + +   T+A  AE+ RSG+ A+ RGQ EAA ALG++     RL+L PQA
Sbjct: 153 ATIS-DFWKLALPIVMCTSATTAEVFRSGVRALDRGQTEAAWALGMSPSLTMRLILAPQA 211

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +R ++P L +Q + ++K ++LA  + + +L+  G T+I Q
Sbjct: 212 LRLMLPTLITQMVTIIKGTTLAYVLAYPELMYRGSTMIGQ 251


>gi|167749245|ref|ZP_02421372.1| hypothetical protein EUBSIR_00196 [Eubacterium siraeum DSM 15702]
 gi|167657774|gb|EDS01904.1| hypothetical protein EUBSIR_00196 [Eubacterium siraeum DSM 15702]
          Length = 233

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 18/214 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG----KALPLLYISTFLIFGLPTLVLIALKYQL 244
           I +F+ +LG ++  F   + +    + G      +  LY+  F+I G P LV      QL
Sbjct: 34  ISLFAVILGFLIGAFVAVVKQLCAGRRGIGWIAKICDLYV--FVIRGTPVLV------QL 85

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                VL  FN+ G + +    +   I     + A++AEIVR+G+ ++ +GQ EA  +LG
Sbjct: 86  LLINAVL--FNYRGANAIVAAVLCFGIN----SGAYVAEIVRAGIESIDKGQTEAGRSLG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +   L++LPQA+++I+P L ++++ L+K +S+A  +   D+      + ++T   I
Sbjct: 140 LGAGQTMWLIVLPQAIKNILPALGNEFIVLVKETSIAGYIAVTDITKAAQYVGSKTYDLI 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +LI    YL L  ++      L  ++   +++
Sbjct: 200 TPLLIAAAFYLILVFILTKLQKLLERRLGKSDRR 233


>gi|119898556|ref|YP_933769.1| amino acid permease [Azoarcus sp. BH72]
 gi|119670969|emb|CAL94882.1| conserved hypothetical amino acid permease [Azoarcus sp. BH72]
          Length = 217

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 1/133 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++    L+ +T+A++AEI R  + AVP+GQ EA+ +L L++ +  R V+LPQ
Sbjct: 81  GIDVSP-WIAAAAGLTLFTSAYLAEIWRGCVEAVPKGQWEASSSLALSYAQQMRHVILPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  + P     + ++K +++   +GFA+L   G  + N T Q   +  +    Y +L 
Sbjct: 140 ALRIAVAPTVGFSVQVVKGTAVTSIIGFAELTKTGSMLANATFQPFMVFGLVAAGYFALC 199

Query: 379 IMIALFMNRLNAK 391
             ++L+   L  K
Sbjct: 200 YPLSLYAKSLERK 212


>gi|323173470|gb|EFZ59099.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli LT-68]
          Length = 347

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|312139901|ref|YP_004007237.1| abc transporter integral membrane subunit [Rhodococcus equi 103S]
 gi|325674219|ref|ZP_08153908.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
 gi|311889240|emb|CBH48554.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
 gi|325554899|gb|EGD24572.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
          Length = 314

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 59/95 (62%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF       +   F+   I L+   AA++AEIVR+G+ +V  GQ EA+ ALG++  +  R
Sbjct: 146 QFAHFDIQALEAAFLFAVIGLALNEAAYMAEIVRAGVGSVSEGQTEASTALGMSWAQTMR 205

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
             +LPQAMR IIPP  ++ +++LK +SL  AV ++
Sbjct: 206 RTVLPQAMRVIIPPTGNELISMLKTTSLVAAVPYS 240


>gi|167770581|ref|ZP_02442634.1| hypothetical protein ANACOL_01927 [Anaerotruncus colihominis DSM
           17241]
 gi|167667176|gb|EDS11306.1| hypothetical protein ANACOL_01927 [Anaerotruncus colihominis DSM
           17241]
          Length = 218

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R GL+A+ RGQ EA   LGL+  + T  V+LPQ +R  +P +T++ + L+K+
Sbjct: 103 AAYFAEIFRGGLLAIDRGQYEACQVLGLSRVQTTVRVILPQMIRVALPSITNESITLIKD 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++L  ++   +++      + +TG     ++ ++ IYL L+ ++ +F   L  K A
Sbjct: 163 TALVFSIAVLEILYYAKAAVTRTGNVFPYVIAFV-IYLLLNTVLQMFFKWLEKKTA 217


>gi|162448094|ref|YP_001621226.1| ABC transporter substrate-binding and permease [Acholeplasma
           laidlawii PG-8A]
 gi|161986201|gb|ABX81850.1| ABC-type transport system, substrate-binding and permease component
           [Acholeplasma laidlawii PG-8A]
          Length = 512

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 74/122 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+IAEI+R  + A+ +GQMEAA +LG +  K+   ++ PQA+++ +P + ++++  LK
Sbjct: 389 TAAYIAEILRGSMNAIDKGQMEAARSLGFSRVKSLLYIVYPQAIKNALPAIGNEFIVNLK 448

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++++   +G  DL +    ++  T   +   +I   IYL L+ + +L +N L  + A KE
Sbjct: 449 DTAVLSVIGVLDLFNATRQVVGATYDTVTPFVITAIIYLVLTGVTSLAVNYLENRQAGKE 508

Query: 397 KK 398
            K
Sbjct: 509 VK 510


>gi|300916767|ref|ZP_07133477.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300415953|gb|EFJ99263.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 347

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|91787283|ref|YP_548235.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696508|gb|ABE43337.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 228

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 57/87 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  I L  + AA++AEI+R GL ++ RGQ EAA+A+GL   +    V+ PQA+R +
Sbjct: 90  PGFWAGIIGLGLHGAAYVAEILRGGLQSIHRGQREAALAVGLAPHQVFMHVVFPQALRVM 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +PPL + Y+ LLK+SSL   +   +L+
Sbjct: 150 LPPLLNTYVALLKDSSLCALIATDELM 176


>gi|301022229|ref|ZP_07186144.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300397642|gb|EFJ81180.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 347

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|291454548|ref|ZP_06593938.1| glutamate transporter permease [Streptomyces albus J1074]
 gi|291357497|gb|EFE84399.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 307

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 24/179 (13%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   + +  LG V  +   RLS H   +    +P   +  F    +P L+L+   
Sbjct: 80  TLKAAALSMIIALPLGAVFGI--ARLSDHAWVR----IPAGTVVEFF-RAIPVLILMVFA 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +L+               +V P+   LY     L  Y A+ +AEIVR+G++++P GQ E
Sbjct: 133 NELY-------------SGSVEPDVRPLYAVVTGLVLYNASVLAEIVRAGILSLPSGQAE 179

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTI 356
           A  A+GL   +  R +LLPQA+ +++P + SQ + ++K+++L  A +GF +L+   GT+
Sbjct: 180 AGRAIGLRKSQTMRFILLPQAVTAMLPAIVSQLVVIVKDTALGGAMIGFTELLRSRGTM 238



 Score = 39.7 bits (91), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 22/134 (16%)

Query: 19  LYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           LYD      +  N+ V ++ A+ L     W V+ + +   K +L        E A ++  
Sbjct: 15  LYDTPGPRAKARNLIVSVVFAVALAAGVWWLVSALGD---KGHL--------EWAKWK-- 61

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
               P+T  SS+   +L G  NT   A   MI A  +G + G  RLS +  V       V
Sbjct: 62  ----PFTESSSWTVYLLPGLGNTLKAAALSMIIALPLGAVFGIARLSDHAWVRIPAGTVV 117

Query: 134 EVFRNIPPLVVIFF 147
           E FR IP L+++ F
Sbjct: 118 EFFRAIPVLILMVF 131


>gi|291086480|ref|ZP_06355922.2| general amino acid ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291067532|gb|EFE05641.1| general amino acid ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 368

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|222094600|ref|YP_002528660.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1]
 gi|221238658|gb|ACM11368.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1]
          Length = 235

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 36  TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 89

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 90  FYGLPTLN-------IEVEP-YTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 142 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 178



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 50  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 90


>gi|218662211|ref|ZP_03518141.1| amino acid ABC transporter permease [Rhizobium etli IE4771]
          Length = 229

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 67/119 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A GL+  K TR + LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +L+    YL+L+ +IA     L A + ++ 
Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAHVPVRR 229


>gi|297198788|ref|ZP_06916185.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|197717403|gb|EDY61437.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 277

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 35/214 (16%)

Query: 190 FVFSFVLGIVLSLFATRLS-----RHFHEKTGKALPLLYISTFLIFGLPTL---VLIALK 241
           FV   VLG+V++L   RLS     R F          +YI  F   GLP L   + I + 
Sbjct: 81  FVVGLVLGMVIALM--RLSSVGPYRWFAG--------VYIEIFR--GLPALLIFIFIGVA 128

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L F          IGG+     +  + +AL    AA++AE +R+G+ AVP+GQMEAA 
Sbjct: 129 VPLAFPGT-----EIIGGT-----YGKVALALGLVAAAYMAETIRAGIQAVPKGQMEAAR 178

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTII 357
           +LG +  +A   +++PQA R I+PPLT++ + L K+SSL + +G      +L   G  + 
Sbjct: 179 SLGFSPARAMVSIIIPQAFRIILPPLTNELVLLFKDSSLVLFLGVTLEERELSKYGRDLA 238

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + T  +   IL+    YL ++I +   + R+ AK
Sbjct: 239 STTANSTP-ILVAGLCYLLVTIPLGFVVRRMEAK 271



 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 37/77 (48%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +D  +   I +   NT     SG +   ++G ++   RLS+     W   VY+E+FR +P
Sbjct: 58  ADQMFPDVITLALKNTVLYTLSGFVVGLVLGMVIALMRLSSVGPYRWFAGVYIEIFRGLP 117

Query: 141 PLVVIFFLYKSVLSVLP 157
            L++  F+  +V    P
Sbjct: 118 ALLIFIFIGVAVPLAFP 134


>gi|254391812|ref|ZP_05007007.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197705494|gb|EDY51306.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
          Length = 302

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 21/197 (10%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RLS H   +    +P+  +  F    +P L+L+   YQ            F+  +T+  +
Sbjct: 103 RLSDHAWVR----IPVGAVVEFF-RAIPVLLLMVFAYQ-----------AFVQFTTIESD 146

Query: 266 FMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           F  +Y     L  Y A+ IAEIVR+G++++P GQ +AA A+G+   +A   VLLPQA+ +
Sbjct: 147 FRPMYAVITGLVLYNASVIAEIVRAGILSLPNGQTDAAKAIGMRKGQAMAHVLLPQAVTA 206

Query: 323 IIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIM 380
           ++P L SQ + ++K+++L  A +GF++L+     I  N     I  + +   I++ ++  
Sbjct: 207 MLPALVSQLVVIVKDTALGGALLGFSELLYQNRAITANYGANTIAALTVIALIFILVNFA 266

Query: 381 IALFMNRLNAKIALKEK 397
           +  F + L  +I   +K
Sbjct: 267 LTSFASWLEGRIRRGKK 283



 Score = 37.0 bits (84), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSS-YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119
           +G ++ER     ++   P+ +D+  + T +L G   T   A   M+ A  +G  +G GRL
Sbjct: 46  LGVMAERDQLASEK-WSPFVTDAKVWTTFLLPGLGETLKAAGISMLIALPLGAALGIGRL 104

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           S +  V       VE FR IP L+++ F Y++
Sbjct: 105 SDHAWVRIPVGAVVEFFRAIPVLLLMVFAYQA 136


>gi|170696518|ref|ZP_02887642.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170138565|gb|EDT06769.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 248

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 24/163 (14%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLPTL        +H D                 E  +  +A++    A+  EIVR
Sbjct: 75  FVFFGLPTL-------GIHID-----------------EMQAAILAMTVNLGAYAIEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ++AA ALGL  R+  R ++LPQA+ ++ P L SQ L ++  S++   +  
Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYIVLPQALANVFPALLSQVLIVMLGSAVVSQISV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            DL      + ++  ++ E  LI    YL LSI++   +NR  
Sbjct: 171 PDLTYAANFVQSRNFRSFESYLIITATYLLLSIVLRQIINRFG 213


>gi|146313343|ref|YP_001178417.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145320219|gb|ABP62366.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Enterobacter sp. 638]
          Length = 367

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|325498848|gb|EGC96707.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ECD227]
          Length = 347

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PL+V + +Y   L +  +               R     TLT+   +    
Sbjct: 105 YIAVWAVIYPLIVWWLMYGGFLGLERV-------------ETRQWGGLTLTLIIASVGIA 151

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 201 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 257 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296


>gi|284033027|ref|YP_003382958.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283812320|gb|ADB34159.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 249

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 76/132 (57%), Gaps = 7/132 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   AA+I EI RSG+ +V +GQ+EAA ALG  +    RLV++PQ +R ++P L +Q
Sbjct: 106 LALSLIAAAYIGEIFRSGIQSVEKGQLEAARALGFGYSAGMRLVVIPQGVRRVLPALVNQ 165

Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ L+K SSL   +G      +L  +G       G    ++L  +F YL +++ +   +N
Sbjct: 166 FIALVKESSLVYFLGLLASQRELFRIGQDAAATNGNLSPLLLAGIF-YLIITVPLTHLVN 224

Query: 387 RLNAKIALKEKK 398
             + +  L+E +
Sbjct: 225 WFDKR--LREGR 234



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG VNT  LA + ++  T++G +V    LS  + + W  ++Y ++FR +P ++ I  + +
Sbjct: 27  VGLVNTLILAAASVVLGTVLGMVVAVMGLSRRRWLRWPAKIYTDIFRGLPAILTILLIGQ 86

Query: 151 SVLSVLPIPDH 161
               + PI  H
Sbjct: 87  ---GLSPITRH 94


>gi|78059832|ref|YP_366407.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77964382|gb|ABB05763.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 254

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 5/161 (3%)

Query: 237 LIALKYQLHFDKPVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L+A   +L  + P L Q  FI     G      E  +  +A++    A+  EI+R+G+ +
Sbjct: 56  LVAAYVELIRNTPFLVQLFFIFFGLPGIGVHIDEAQAAVLAMTVNLGAYAVEILRAGIES 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ++AA ALGL  R+    V+LPQA+ ++ P L  Q L ++  S++   +   DL  
Sbjct: 116 VPHGQVQAARALGLHGRQVFGHVVLPQALANVYPALLGQVLIVMLGSAVVSQISVPDLTY 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               I ++  +A EI ++   IYL LSI + + +NR+  ++
Sbjct: 176 AANYIQSRNFRAFEIYIVVTAIYLLLSIALRMLLNRVGRRL 216


>gi|327190600|gb|EGE57689.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli
           CNPAF512]
          Length = 591

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + Y+ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAMRSI+P
Sbjct: 166 FAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 225

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K++S+   +   +L      I  +  + I +++   +W  I +++  +  
Sbjct: 226 TGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVAQ 285

Query: 383 LFMNRLNAKIALK 395
            ++ R  ++ A++
Sbjct: 286 HYIERYFSRGAVR 298


>gi|221210006|ref|ZP_03582987.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
 gi|221170694|gb|EEE03160.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
          Length = 595

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F +  + L+   AAF AE++R G+++V +GQ+EAA ALGL H + T  ++LPQAMR
Sbjct: 167 ISP-FAAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMR 225

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 226 AILPTAFNDLIVLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 285

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 286 SAIQVQVERHYARGALR 302


>gi|302393017|ref|YP_003828837.1| amino acid ABC transporter membrane protein, PAAT family
           [Acetohalobium arabaticum DSM 5501]
 gi|302205094|gb|ADL13772.1| amino acid ABC transporter membrane protein, PAAT family
           [Acetohalobium arabaticum DSM 5501]
          Length = 222

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 79/137 (57%), Gaps = 21/137 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    FL FGLP L+            PVL + +   G T++       + LS  
Sbjct: 64  RGTPLITQLFFLYFGLPQLI------------PVLKEAS---GFTIA------IMGLSLN 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++E +R  + +V +GQMEAA+++G+T+ +A + ++LPQA R  IP L++ ++N++K
Sbjct: 103 SGAYMSEAIRGAISSVEKGQMEAALSVGMTYLQAMKRIILPQAARVAIPALSNSFINIIK 162

Query: 337 NSSLAVAVGFADLVSVG 353
            ++L   +G  ++++  
Sbjct: 163 GTALTFTIGVTEVMATA 179


>gi|288960220|ref|YP_003450560.1| ABC transporter permease protein [Azospirillum sp. B510]
 gi|288912528|dbj|BAI74016.1| ABC transporter permease protein [Azospirillum sp. B510]
          Length = 223

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 59/103 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +   AL   +AAF AE+ R G+++V RGQ EA  ALG+   +  R ++LPQA R +
Sbjct: 89  PPFAAALAALGIQSAAFFAEVFRGGILSVERGQWEAGRALGMGRARLMRRIILPQAARRM 148

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             P   +   L+K ++LA A+ F + +     I+ QT + +E+
Sbjct: 149 AAPFVERSFELVKTTTLAAALAFHETIYSAMVIVTQTYRPLEV 191



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 35/64 (54%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A  +L G   T  L+F G++    IG ++ A RLS  + ++W    + E +RN PPLV  
Sbjct: 14  ADILLAGLGQTLLLSFCGIVAGVAIGGVLAAMRLSGRRSLSWPALAFTEFYRNTPPLVHF 73

Query: 146 FFLY 149
           F+ +
Sbjct: 74  FWFF 77


>gi|228957269|ref|ZP_04119035.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228802460|gb|EEM49311.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 207

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 92/157 (58%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 8   TTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQL---FII 61

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          V P + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 62  FYGLPTLN-------IEVEP-YAAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + V+LPQA R  IPPL++ +++L+K++SLA
Sbjct: 114 MTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLA 150



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++++ WI R+YV + R  P LV +F ++
Sbjct: 22  ILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIF 62


>gi|156935790|ref|YP_001439706.1| hypothetical protein ESA_03661 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534044|gb|ABU78870.1| hypothetical protein ESA_03661 [Cronobacter sakazakii ATCC BAA-894]
          Length = 344

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 218 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 277

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 278 KDTSLVIIIGLFDLFS 293


>gi|330502657|ref|YP_004379526.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328916943|gb|AEB57774.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 232

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV +   Y L++    L QF  +  + + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQL---YLLYYG---LAQFEAVRETFMWPYLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++ RK  + +LLP A+R  +P  +++ + +L  +
Sbjct: 110 AYTAEILAGSLKATPPGEIEAAKAMGMSRRKLYQRILLPSALRRALPQYSNEVIMMLHTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA AV   D+     T+ +Q     E  +     YL+L+ I++ LF
Sbjct: 170 SLASAVTLVDITGAAKTLSSQYYMPFEAYVTAGLFYLALTFILVRLF 216


>gi|253582767|ref|ZP_04859987.1| amino acid ABC transporter permease [Fusobacterium varium ATCC
           27725]
 gi|251835343|gb|EES63884.1| amino acid ABC transporter permease [Fusobacterium varium ATCC
           27725]
          Length = 208

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 113/212 (53%), Gaps = 19/212 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++      +FS  LGI+LSL   R+S++          ++ + T++  G P L+ +  
Sbjct: 14  LTVNLYVVTMLFSLPLGILLSL--GRVSKNTTLSN-----IIQVYTWIFRGTPLLLQL-- 64

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + +++  PV+G        T+SP F +  +       A+  EI R  ++ +  GQ EAA
Sbjct: 65  -FFVYYGLPVVG-------ITLSP-FAAASLTFVINYTAYFCEIFRGSILGIDPGQYEAA 115

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LG+ + +    +++PQA+ + +PPL+++ ++L+K++SL  A+G A+++     ++ + 
Sbjct: 116 KVLGMKYWQTMIRIIIPQALITALPPLSNEAISLIKDTSLVSAIGMAEILRNSRELVTR- 174

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +I    I   IYL LS ++ LF  ++  K+
Sbjct: 175 DFSITPFFICAVIYLGLSTIVVLFFKKMEKKV 206


>gi|149913101|ref|ZP_01901635.1| hypothetical protein RAZWK3B_03895 [Roseobacter sp. AzwK-3b]
 gi|149813507|gb|EDM73333.1| hypothetical protein RAZWK3B_03895 [Roseobacter sp. AzwK-3b]
          Length = 428

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE++R GL A+PRGQ EAA +LGL + ++ RL++LPQA++  IP + + 
Sbjct: 298 IMITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQSMRLIILPQALKISIPGIVNV 357

Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + L K+++L   +   DLV  + G I+  T
Sbjct: 358 SVGLFKDTTLVSVISMFDLVGMIRGPILAAT 388


>gi|300946950|ref|ZP_07161181.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300958248|ref|ZP_07170395.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300315066|gb|EFJ64850.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300453410|gb|EFK17030.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
          Length = 347

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|153953343|ref|YP_001394108.1| amino acid ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146346224|gb|EDK32760.1| Predicted amino acid ABC transporter, permease protein [Clostridium
           kluyveri DSM 555]
          Length = 212

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 76/125 (60%), Gaps = 1/125 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA++AEI R+G+ ++ RGQ EAA ALG+ + +    +++PQA+R+++P + ++
Sbjct: 89  LAFTINYAAYLAEIFRAGIESIDRGQFEAAKALGMNYYETITKIIIPQAIRNVLPAVCNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+K+S+L   +G  DL+     ++ +    I    I   +YL ++ ++ +   +L  
Sbjct: 149 SINLVKDSALVATIGVGDLLRAAKEVVTRD-FTITPFFIAAALYLLITSVLVMGFRQLEK 207

Query: 391 KIALK 395
           K ++K
Sbjct: 208 KYSVK 212


>gi|311108044|ref|YP_003980897.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 16 [Achromobacter
           xylosoxidans A8]
 gi|310762733|gb|ADP18182.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 16
           [Achromobacter xylosoxidans A8]
          Length = 222

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 68/114 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  +ALS Y  A+  EI+R+GL ++PR Q+EA   LGL+  +  R ++L  A+R++
Sbjct: 87  PPFVAAALALSLYFGAYAIEILRAGLDSIPRSQIEAGHCLGLSTWQVYRHIVLAPALRNV 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            P L +Q + LL  +SLA  V   DL   G  I ++T ++ E+  +   IY +L
Sbjct: 147 YPALGTQLVILLLGTSLASQVSAEDLFHAGSFIESRTYRSFEVYAVICGIYFTL 200


>gi|301647046|ref|ZP_07246878.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|301074796|gb|EFK89602.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
          Length = 347

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|262202138|ref|YP_003273346.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           bronchialis DSM 43247]
 gi|262085485|gb|ACY21453.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia
           bronchialis DSM 43247]
          Length = 223

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 51/73 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YTA F+ E +RSG   VP GQ EAA +LGL+  +   +++LPQA+RS+I PL S  + L 
Sbjct: 102 YTATFVCETLRSGFNTVPIGQAEAARSLGLSFTQVFGIIVLPQAIRSVIGPLGSVLIALT 161

Query: 336 KNSSLAVAVGFAD 348
           KN+++A A+G A+
Sbjct: 162 KNTTIASAIGVAE 174


>gi|168752392|ref|ZP_02777414.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758502|ref|ZP_02783509.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4401]
 gi|168769136|ref|ZP_02794143.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4486]
 gi|168783841|ref|ZP_02808848.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4076]
 gi|187776437|ref|ZP_02802695.2| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4196]
 gi|195940014|ref|ZP_03085396.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807701|ref|ZP_03250038.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814609|ref|ZP_03255938.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4045]
 gi|208819421|ref|ZP_03259741.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4042]
 gi|209398401|ref|YP_002272732.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4115]
 gi|254795212|ref|YP_003080049.1| putative amino-acid ABC transporter membrane protein [Escherichia
           coli O157:H7 str. TW14359]
 gi|187767132|gb|EDU30976.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013749|gb|EDU51871.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4113]
 gi|188998879|gb|EDU67865.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354675|gb|EDU73094.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4401]
 gi|189361796|gb|EDU80215.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4486]
 gi|208727502|gb|EDZ77103.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735886|gb|EDZ84573.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4045]
 gi|208739544|gb|EDZ87226.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4042]
 gi|209159801|gb|ACI37234.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4115]
 gi|254594612|gb|ACT73973.1| predicted amino-acid transporter subunit, membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
          Length = 362

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|85058513|ref|YP_454215.1| amino-acid ABC transporter permease component [Sodalis glossinidius
           str. 'morsitans']
 gi|84779033|dbj|BAE73810.1| amino-acid ABC transporter permease component [Sodalis glossinidius
           str. 'morsitans']
          Length = 219

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 14/197 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SFV G+VL  F   L R +  +  K +   Y+  ++I G P LV + L +          
Sbjct: 30  SFVGGLVLG-FLVALVRLYGPQPLKGIADFYV--WVIRGTPLLVQLFLIF---------- 76

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            +           F +  I  +    A+ +EI+R  +++VP+ Q EAA A+G+   +A R
Sbjct: 77  -YGLPSAGVTLDAFPAALIGFTLSVGAYGSEIIRGAIVSVPKAQWEAAWAIGMNSTQAMR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQ++   IPPL + +++L+K++SLA  +   ++      I++ T + + + +    
Sbjct: 136 RVILPQSVFVSIPPLANSFISLIKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYIEAAA 195

Query: 373 IYLSLSIMIALFMNRLN 389
           IYL  S +++   NRL 
Sbjct: 196 IYLLFSTVLSKVQNRLE 212


>gi|33601772|ref|NP_889332.1| putative ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
 gi|33576209|emb|CAE33288.1| putative ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
          Length = 217

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ E +  LG+T+ +  R ++LPQ ++ +
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTMRRIVLPQMVQRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLIMTLILTW 203

Query: 384 FMNRLNAKIALKEK 397
           F   +  + A  ++
Sbjct: 204 FFQHMEKRYAKYDQ 217


>gi|312868947|ref|ZP_07729127.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095511|gb|EFQ53775.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 488

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 13/140 (9%)

Query: 224 ISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           IS+ +I+   GLP +VL    Y        +G  N IG     P F++  + L     A+
Sbjct: 326 ISSTIIYIFRGLPMIVLAFFIY--------MGLPNVIGHKV--PLFLAGVVTLMLDEGAY 375

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I  IV+ G  AV  GQ EAA +LGL +RKA   V+ PQ ++ ++P L +Q++  LK++S+
Sbjct: 376 IGAIVKGGFDAVDPGQWEAARSLGLPYRKALVKVVAPQGIKIMVPSLVNQFIITLKDTSI 435

Query: 341 AVAVGFADLVSVGGTIINQT 360
             A+G  +L   G  II+Q 
Sbjct: 436 LSAIGVMELTQTGTVIISQN 455


>gi|300928694|ref|ZP_07144212.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300463283|gb|EFK26776.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
          Length = 347

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|258405468|ref|YP_003198210.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257797695|gb|ACV68632.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 267

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 12/123 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV      QL +    LG F  +      P F +  IA++    A++ EI R+G+ 
Sbjct: 113 GIPLLV------QLFYIYYALGSFMQV------PPFFAAIIAMTVCYGAYMGEIFRAGIE 160

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQ EAA +LG +  +    V++PQAMR+I+PP+ ++++ LLK++SL   +  +DL+
Sbjct: 161 SIDYGQTEAARSLGFSRGQTMFYVIIPQAMRTILPPVGNEFIALLKDTSLVSIIAVSDLL 220

Query: 351 SVG 353
             G
Sbjct: 221 RRG 223



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    +  + ++G + G GR+S   +V      YVEV R IP LV +F++Y +
Sbjct: 67  GILVTFEVTMLAIFLSLVVGLIAGLGRISRIPIVNLTASTYVEVVRGIPLLVQLFYIYYA 126

Query: 152 VLSVLPIP 159
           + S + +P
Sbjct: 127 LGSFMQVP 134


>gi|255617479|ref|XP_002539845.1| Nopaline transport system permease protein nocM, putative [Ricinus
           communis]
 gi|223501793|gb|EEF22538.1| Nopaline transport system permease protein nocM, putative [Ricinus
           communis]
          Length = 217

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 1/136 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            ++SP F S  + L   TAA + EI R  + AVP GQ EAA ALGL   +    VL+PQ 
Sbjct: 80  GSLSP-FTSAVVGLGIITAANLCEIYRGAMKAVPVGQYEAAHALGLPTVRRYLDVLVPQI 138

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R  +P L +  + LLK++++A  +G  DL      +  +T + IE+  ++  +Y  +SI
Sbjct: 139 FRVSLPALATYAIGLLKDTAVASTIGVPDLALSANRVAQETFKGIEVYAVFGLVYFLISI 198

Query: 380 MIALFMNRLNAKIALK 395
            IA     L+ ++ ++
Sbjct: 199 AIAFATRGLDRRLRVR 214


>gi|169351674|ref|ZP_02868612.1| hypothetical protein CLOSPI_02455 [Clostridium spiroforme DSM 1552]
 gi|169291896|gb|EDS74029.1| hypothetical protein CLOSPI_02455 [Clostridium spiroforme DSM 1552]
          Length = 238

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 12/163 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV     Y L   KP+LG      G  +          +S  T A++AEI+RSG+ 
Sbjct: 80  GTPMLVQAMFLYYLL--KPILGWTGITAGLVI----------ISINTGAYMAEIIRSGIQ 127

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQ EAA ++G++  +  R ++LPQA+++  P + +Q +  +K+SS+   +   ++ 
Sbjct: 128 SVDIGQTEAAKSIGMSTVQTFRKIVLPQAIKNSFPSIGNQLIINIKDSSMLNVISVTEVY 187

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               +I   T Q  E   I M IYL L+ + +L MN    ++ 
Sbjct: 188 FQSTSIAGSTYQYTETFFITMIIYLILTTIASLIMNYFERRMC 230


>gi|161520734|ref|YP_001584161.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189353081|ref|YP_001948708.1| polar amino acid transport system ATP-binding protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344784|gb|ABX17869.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189337103|dbj|BAG46172.1| polar amino acid transport system ATP-binding protein [Burkholderia
           multivorans ATCC 17616]
          Length = 595

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F +  + L+   AAF AE++R G+++V +GQ+EAA ALGL H + T  ++LPQAMR
Sbjct: 167 ISP-FAAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMR 225

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 226 AILPTAFNDLIVLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 285

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 286 SAIQVQVERHYARGALR 302


>gi|15965624|ref|NP_385977.1| amino acid ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307314028|ref|ZP_07593641.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307321205|ref|ZP_07600607.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15074805|emb|CAC46450.1| Amino acid transport system permease [Sinorhizobium meliloti 1021]
 gi|306893107|gb|EFN23891.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306899150|gb|EFN29789.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 267

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 6/206 (2%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQL 244
            A + V +  +G+V+  F   L++   EK+ +    +Y + F   GLP L+ L  + Y L
Sbjct: 56  TASLAVATLPVGLVIGFFVA-LAKQSEEKSLRLAGNIYTTIFR--GLPELLTLFIVYYGL 112

Query: 245 H-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               +  L    + G   ++  F++  IAL    +A+ +E++ S   A+P GQ EA  AL
Sbjct: 113 QILVQQFLATVGYEGAVEINA-FVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDAL 171

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   K  RL++LPQ +R  +P L + ++ LLK+++L   +G  D++   G     T  A
Sbjct: 172 GLHRGKTMRLIILPQLIRIALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHA 231

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLN 389
            E   I   ++L L+++ ++  + L 
Sbjct: 232 FEFFGIACVLFLVLAMISSVVFSALE 257


>gi|330446186|ref|ZP_08309838.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490377|dbj|GAA04335.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 220

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 1/135 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  IALS   A++ A+ +R  + AVP+GQ EAA ALG++  +    +++PQA+R
Sbjct: 72  ISP-FLSGVIALSLIFASYAAQTIRGAIRAVPKGQREAASALGISKSRTFFAIIVPQAVR 130

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T ++         +YL ++++ 
Sbjct: 131 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHESFTWYATAAGVYLVITLIT 190

Query: 382 ALFMNRLNAKIALKE 396
              +  ++AK + ++
Sbjct: 191 QKIIKIIDAKYSAQD 205



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  LAF+ ++   ++  L   G +S  +LVAW     V V R +P L+++ F++
Sbjct: 2   TVQLAFTSLVVGLVLAMLFAGGEMSRFRLVAWPTTALVTVLRGLPELLIVLFIF 55


>gi|300937397|ref|ZP_07152232.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300979703|ref|ZP_07174653.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300307921|gb|EFJ62441.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300457571|gb|EFK21064.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|324015880|gb|EGB85099.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 347

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 221 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 280

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 281 KDTSLVIIIGLFDLFS 296


>gi|42518507|ref|NP_964437.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41582792|gb|AAS08403.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|329666777|gb|AEB92725.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 214

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 17/192 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246
           +IF ++ V+ I L L       H   K  KA+   Y+  ++I G P L+ LI + Y L  
Sbjct: 21  EIFFWTTVVSIPLGLLVA-FGLHSKLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G         V P + +  +A     AA+ AEI R GL AVP GQ EAA  LGL+
Sbjct: 76  --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G     +    + +
Sbjct: 126 RWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 185

Query: 367 ILIWMFIYLSLS 378
           +L+   +YL+++
Sbjct: 186 VLV-GCVYLAMT 196


>gi|158423211|ref|YP_001524503.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330100|dbj|BAF87585.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 466

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 91/165 (55%), Gaps = 25/165 (15%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF----GLPTL-VLIALKYQLHFD 247
           S  LGI+L+L   R S+         +PL++I++ L      G+P + VL    Y L   
Sbjct: 271 SLPLGILLAL--GRRSK---------MPLMHIASTLFIEFWRGVPLVTVLFFATYMLPLF 319

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P  G+F   G        +   + ++ + +A++AE+VR GL A+P+GQ E A+ALGL  
Sbjct: 320 LP--GRFTIDG-------LLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMALGLPG 370

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
               RLV+LPQA++ +IP + + ++ L K+++L + V   DL+ V
Sbjct: 371 TLMMRLVVLPQALKLVIPGIVNTFIALFKDTTLVLIVSIFDLLGV 415


>gi|134102290|ref|YP_001107951.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914913|emb|CAM05026.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 780

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 23/168 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           ++LPLL +  F I+ LP ++      +L   +PVLG          SP F+   +AL   
Sbjct: 339 RSLPLLVLLIF-IYNLPQVI-----PEL---RPVLG----------SP-FVVGLVALVLS 378

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEI R GL +V  GQ EAA ALG+ +    RLV++PQA R  +P L +Q++ +LK
Sbjct: 379 ETAYIAEIHRGGLKSVSVGQGEAARALGIPYGGVQRLVVIPQAFRVALPALGNQFITILK 438

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            +SL  ++  A+++ VG  +  Q  + +E +L     Y+   +++ LF
Sbjct: 439 LTSLVSSISLAEILLVGQRLYTQNFKVLETLLAVSIFYV---VLVTLF 483


>gi|91212701|ref|YP_542687.1| putative transport system permease [Escherichia coli UTI89]
 gi|237705971|ref|ZP_04536452.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA]
 gi|91074275|gb|ABE09156.1| putative transport system permease protein [Escherichia coli UTI89]
 gi|226899011|gb|EEH85270.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA]
          Length = 368

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 126 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 172

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 173 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 221

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 222 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 277

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 278 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317


>gi|227888781|ref|ZP_04006586.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227850618|gb|EEJ60704.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 224

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 17/192 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHF 246
           +IF ++ V+ I L L       H   K  KA+   Y+  ++I G P L+ LI + Y L  
Sbjct: 31  EIFFWTTVVSIPLGLLVA-FGLHSKLKLVKAILKFYV--WIIRGTPLLLQLIFIFYGL-- 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G         V P + +  +A     AA+ AEI R GL AVP GQ EAA  LGL+
Sbjct: 86  --PTVG--------IVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQVLGLS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G     +    + +
Sbjct: 136 RWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDVSLVPL 195

Query: 367 ILIWMFIYLSLS 378
           +L+   +YL+++
Sbjct: 196 VLVGC-VYLAMT 206


>gi|222086234|ref|YP_002544766.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723682|gb|ACM26838.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 267

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 12/173 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP L     + +G+  L+   L Y + ++ PV  + N          F++  IALS  
Sbjct: 97  RGLPELLTLFIIYYGMQILLQTVLAY-VGYEGPV--EIN---------AFVAGMIALSIV 144

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A+ +E++ S   A+P+GQ EA  ALG    +  RL++LPQ +R  +P L + ++NLLK
Sbjct: 145 FSAYCSEVLLSAFRAIPKGQYEAGDALGFHRVRTMRLIILPQLIRISLPNLGNLWMNLLK 204

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++S    +G AD+V   G  +  T +      +   +YL L+I+ +  ++ L+
Sbjct: 205 DTSYVSIIGLADIVRQTGLAVRSTKEPFFFYAVACSLYLVLAIISSAGLSYLD 257


>gi|254173468|ref|ZP_04880141.1| amino acid ABC transporter permease protein [Thermococcus sp. AM4]
 gi|214032877|gb|EEB73706.1| amino acid ABC transporter permease protein [Thermococcus sp. AM4]
          Length = 225

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 111/212 (52%), Gaps = 12/212 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++     F+  F LG +L++     +R +  K  KAL   YI   LI G P L+ +  
Sbjct: 16  VTLELTVVGFIGGFALGFLLAV-----ARTYGGKLSKALSTAYIE--LIRGTPMLLQL-- 66

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y + F  P++ + N+     ++P  ++  + +   +AA+ AE +R    +V  GQ+EAA
Sbjct: 67  -YIIGFGLPLVIR-NYFPHFVMNPT-LAAALGMVINSAAYQAEYIRGAFNSVEYGQVEAA 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++LG+T     R V+ PQA R ++P  T++ + LLK SSLA+ +   +L+       +QT
Sbjct: 124 LSLGMTKWGIIRHVIFPQAFRIMLPSWTNEMVYLLKYSSLAMLLAVPELMYQASVAASQT 183

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               +I L+   IYL  + +I   M ++  ++
Sbjct: 184 FLYAQIYLVVAGIYLVFATLIIGIMRKIELRL 215


>gi|148982289|ref|ZP_01816696.1| cystine transport system permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145960554|gb|EDK25911.1| cystine transport system permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 139

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 62/86 (72%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ + AA++AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P
Sbjct: 7   FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALP 66

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            L + +++++K++SLA  +G A++++
Sbjct: 67  SLMNYFIDMIKSTSLAFTLGVAEIMA 92


>gi|125718885|ref|YP_001036018.1| ABC-type arginine/histidine transporter, permease protein, putative
           [Streptococcus sanguinis SK36]
 gi|125498802|gb|ABN45468.1| ABC-type arginine/histidine transporter, permease protein, putative
           [Streptococcus sanguinis SK36]
          Length = 228

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSG 288
           P ++LI   Y L     +L Q F  +G      +F  LY A   Y   T   ++EI+RS 
Sbjct: 64  PPILLILFFYSLF--PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ+EAA A+GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D
Sbjct: 122 ILTVDKGQLEAAQAIGLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++     + + Q  E  L+   IYL +  +I      L  + AL
Sbjct: 182 ITALAKIEASHSYQYSESYLVIFVIYLIICGLIQWIFRGLEKRSAL 227


>gi|121604398|ref|YP_981727.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593367|gb|ABM36806.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 223

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 67/111 (60%), Gaps = 10/111 (9%)

Query: 274 SCYTAAFIA----------EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           S YTAA  A          EI+R+G+ ++P+GQ+EA +AL L   +  R V+L  A+++I
Sbjct: 88  SAYTAALTALVINLGAYATEIIRAGIESIPKGQIEAGLALNLKRHEIFRFVILKPALKAI 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            P LTSQ++ L+ +S++  A+   DL SV   + +QT ++ EI ++   IY
Sbjct: 148 YPALTSQFILLMLSSAVVSAISADDLTSVAANLQSQTFRSFEIYIVVAGIY 198


>gi|330806944|ref|YP_004351406.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375052|gb|AEA66402.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 221

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 73/128 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 93  IGFSLNMAAYACEILRAAISSIERGQWEAAASIGMTRAQTLRRAILPQAARTALPPLGNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ +++   N L A
Sbjct: 153 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWVLASVLSHLQNVLEA 212

Query: 391 KIALKEKK 398
           ++   +++
Sbjct: 213 RVNRHDQE 220



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           RLS  KLV WI R+YV  FR  P LV +F +Y
Sbjct: 44  RLSRFKLVNWIARIYVSFFRGTPLLVQLFVIY 75


>gi|295689320|ref|YP_003593013.1| polar amino acid ABC transporter inner membrane subunit
           [Caulobacter segnis ATCC 21756]
 gi|295431223|gb|ADG10395.1| polar amino acid ABC transporter, inner membrane subunit
           [Caulobacter segnis ATCC 21756]
          Length = 219

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 72/128 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I  S   AA+  EI+RS + AV +GQ EAA  LG++  +  R V+LPQA R+ 
Sbjct: 86  PALVAAGIGFSLNVAAYACEILRSAIAAVDKGQWEAATVLGMSRGQTLRRVILPQAARTA 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + PL++ +++L+K++SLA  +   +L      I  +T +   + L    IY  +S ++A 
Sbjct: 146 VAPLSNSFISLVKDTSLAATIQVPELFRQTQLITARTYEIFTMYLAAAAIYWIVSTVLAA 205

Query: 384 FMNRLNAK 391
             +RL  +
Sbjct: 206 GQHRLERR 213


>gi|261366633|ref|ZP_05979516.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Subdoligranulum variabile DSM 15176]
 gi|282571452|gb|EFB76987.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Subdoligranulum variabile DSM 15176]
          Length = 274

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 75/122 (61%), Gaps = 1/122 (0%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++ +S  T A++AE VR G++++  GQ E A+++G+TH +    V+LPQA+R+IIP + +
Sbjct: 110 FLIVSINTGAYMAETVRGGIVSIDPGQTEGAMSIGMTHWQTMLHVILPQALRNIIPQIGN 169

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            ++  +K++S+   +   DL  V  +++       E   I M IYL+++ ++A ++ RL 
Sbjct: 170 NFIINIKDTSVLSVISITDLFFVHKSVVGALYTYFESATIVMIIYLTMT-LLASYLLRLW 228

Query: 390 AK 391
            K
Sbjct: 229 EK 230


>gi|126179312|ref|YP_001047277.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanoculleus marisnigri JR1]
 gi|125862106|gb|ABN57295.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Methanoculleus marisnigri JR1]
          Length = 225

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 11/165 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           GLP LVL+ L +   F    LG  + F+ G+ V          L    AA+ ++I R  +
Sbjct: 63  GLPILVLLFLFWFGIFPGLGLGNLSAFVVGAVV----------LGLRGAAYQSQIFRGAI 112

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQM AA +LG++   A R V+LPQAMR  +P  +++Y N+L +S++  A+G  +L
Sbjct: 113 QSVGEGQMIAARSLGMSRLTAIRSVILPQAMRIALPGWSNEYPNILTDSAVCYAIGVVEL 172

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +++   ++ QT   + + L    I++ L+      ++RL A+IA+
Sbjct: 173 LTITSRMVTQTNITMPVYLATAGIFIILNYGGLKLLHRLEARIAI 217


>gi|325956802|ref|YP_004292214.1| amino acid ABC transporter permease [Lactobacillus acidophilus
           30SC]
 gi|325333367|gb|ADZ07275.1| amino acid ABC transporter permease [Lactobacillus acidophilus
           30SC]
          Length = 224

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 17/188 (9%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H K  + +  LY+  F I  +PT+VL+   Y +++  P     N+      S  +M+
Sbjct: 47  RTMHNKVVRFILRLYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW------SATWMA 95

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + +A S + AA  ++IVR  L +VP+ Q E+ +ALGL++ +  R VLLPQA++  +P   
Sbjct: 96  V-LAFSLWVAAEFSDIVRGALESVPKSQRESGLALGLSNLQLFRYVLLPQAVKLELPATI 154

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIAL 383
           +    ++K +SL + +   ++++VG  II    Q     + W++     +Y  L   ++ 
Sbjct: 155 NLATRVIKTTSLLMVINIMEVINVGQQIIEANNQKYPTGVFWIYGFIFILYFILDYPLSA 214

Query: 384 FMNRLNAK 391
           +  RL A 
Sbjct: 215 WAKRLTAN 222



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   + W+A   ++    +GT+ G  R   NK+V +I R+Y+E FR +P +V+++ +Y
Sbjct: 21  GLWASIWIAVVSLLIGLALGTIFGILRTMHNKVVRFILRLYLEFFRIVPTIVLLYLVY 78


>gi|296877417|ref|ZP_06901454.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431578|gb|EFH17388.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 520

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 63/109 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G++AV  GQ EAA ALG+TH +  R V+LPQ +R+I+P   +++ 
Sbjct: 383 VSINTGAYMSEIVRGGILAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFG 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  Q  Q      I   IY  L+  I
Sbjct: 443 INIKDTSVLNVISVVELYFTGNTVATQNYQYFPTFTIIAVIYFVLTFTI 491


>gi|312867750|ref|ZP_07727956.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096813|gb|EFQ55051.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 213

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 24/185 (12%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           +LT+   A + + S  LGIV++      S+  H        LL I+ +++ G P L+   
Sbjct: 16  SLTLQVFAFVLILSIPLGIVVAFLLQLRSKILHG-------LLTINIWIMRGTPLLL--- 65

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQ 296
              QL F   VL         ++      L  A++ +T   AA+ AEI R G++A+P GQ
Sbjct: 66  ---QLIFIYYVL--------PSIGIRIDRLPAAITAFTLNYAAYFAEIFRGGIVAIPTGQ 114

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA  L L+  +  R ++LPQ ++ ++P + ++ ++L+K++SL  A+G +DL+    T 
Sbjct: 115 YEAAKVLKLSSWQTIRYIILPQVVKIVLPSVFNEVMSLIKDTSLVYALGISDLILASRTA 174

Query: 357 INQTG 361
            N+  
Sbjct: 175 ANRDA 179


>gi|311106238|ref|YP_003979091.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 9 [Achromobacter
           xylosoxidans A8]
 gi|310760927|gb|ADP16376.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 9
           [Achromobacter xylosoxidans A8]
          Length = 217

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ E +  LG+T+ +  R ++LPQ ++ +
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRIVLPQMVQRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLIMTLILTW 203

Query: 384 FMNRLNAKIALKEK 397
           F   +  + A  ++
Sbjct: 204 FFQHMEKRYAKYDQ 217


>gi|194016444|ref|ZP_03055058.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus pumilus ATCC 7061]
 gi|194011917|gb|EDW21485.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus pumilus ATCC 7061]
          Length = 214

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 6/153 (3%)

Query: 249 PVLGQFNFIGGSTVSPEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           P + Q  FI     + EF+SL       I ++    A+ +EI+R+G+ ++ +GQ EAA +
Sbjct: 62  PFIVQLFFIYFGLNTLEFISLDRVPAGIITVAINAGAYFSEIIRAGIQSIDKGQTEAARS 121

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG T  +  R ++LPQA R ++P +T+Q +  LK++SL   +G AD++  G    + T  
Sbjct: 122 LGFTGGQNMRFIVLPQAFRRMLPAITNQAIISLKDTSLLSIIGIADIMQRGQVQASATFD 181

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + + LI   IY  +  +++L  +    +  +K
Sbjct: 182 PLNVWLIVGIIYFVIIYLLSLLASYAERRFDIK 214


>gi|209547562|ref|YP_002279480.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538806|gb|ACI58740.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 592

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + ++ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAMRSI+P
Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 225

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K++S+   +   +L      I  +  + I +++   +W  I +++  +  
Sbjct: 226 TGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSIAQ 285

Query: 383 LFMNRLNAKIALK 395
            ++ R  +K A++
Sbjct: 286 HYIERYFSKGAVR 298


>gi|220923864|ref|YP_002499166.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948471|gb|ACL58863.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 217

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 62/96 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y + F AEI+R+G+ ++ RGQ +A++ALG+++ +  R ++LPQA+R ++PPL  Q
Sbjct: 94  LGLGFYASGFYAEILRAGVQSIDRGQTDASLALGMSYIQRMRRIILPQALRRMVPPLVGQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            +  LKN++L   +   DL+     I + T + +E+
Sbjct: 154 TIMQLKNTTLLSVLTIPDLLYQASYISSFTYRPMEV 189



 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 27/40 (67%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IG  V   +L+  +LV WI R++VE FRNIP LV++ + Y
Sbjct: 36  IGLFVALLQLTPWRLVRWIGRIWVEFFRNIPLLVLLLWTY 75


>gi|154508368|ref|ZP_02044010.1| hypothetical protein ACTODO_00865 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798002|gb|EDN80422.1| hypothetical protein ACTODO_00865 [Actinomyces odontolyticus ATCC
           17982]
          Length = 225

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 54/85 (63%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +  A + ++VR  LIA+PR Q E+A ALGLT R+  R V+LPQ +R + PP  +    
Sbjct: 100 TLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTMRRVILPQTLRRLAPPAVNLITR 159

Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358
           ++K +SL V +G  +++ VG  II+
Sbjct: 160 MVKTTSLVVLIGVVEVLKVGQQIID 184


>gi|117625559|ref|YP_858882.1| putative transport system permease protein [Escherichia coli APEC
           O1]
 gi|115514683|gb|ABJ02758.1| putative transport system permease protein [Escherichia coli APEC
           O1]
          Length = 368

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 126 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 172

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 173 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 221

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 222 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 277

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 278 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317


>gi|294492998|gb|ADE91754.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli IHE3034]
 gi|307625129|gb|ADN69433.1| putative transport system permease protein [Escherichia coli UM146]
 gi|323957582|gb|EGB53296.1| inner membrane transport system [Escherichia coli H263]
          Length = 367

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|238854604|ref|ZP_04644937.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 269-3]
 gi|282933427|ref|ZP_06338806.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 208-1]
 gi|238832789|gb|EEQ25093.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 269-3]
 gi|281302441|gb|EFA94664.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 208-1]
          Length = 225

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 73/128 (57%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S  T A+ +E +R+ ++AVP+ Q EAA ++GL + K    V+ PQA+R  IPPL++ 
Sbjct: 101 LTFSLNTGAYASETIRASILAVPQDQWEAAYSIGLPYHKVLSRVIFPQAIRIAIPPLSNS 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SLA ++   ++  V   I +   Q        M +Y  ++I+ A+F + L+ 
Sbjct: 161 FIGLVKDTSLASSITLVEMFMVSQEIASHNYQP-------MLMYSIVAIIYAIFCSLLSL 213

Query: 391 KIALKEKK 398
                EK+
Sbjct: 214 LQLYLEKR 221


>gi|319940825|ref|ZP_08015164.1| polar amino acid ABC transporter [Sutterella wadsworthensis
           3_1_45B]
 gi|319805707|gb|EFW02488.1| polar amino acid ABC transporter [Sutterella wadsworthensis
           3_1_45B]
          Length = 227

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 96/177 (54%), Gaps = 15/177 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+PL+ +  +    +P +    LK     D PV+     IG +      ++  I    +
Sbjct: 63  RAVPLVLVLFWFFLLMPEV----LKIAFGLDHPVM-----IGAN------LTAIITFVLF 107

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI+R+G+ ++ RGQ  AA  LGLT+ +  R V+LPQA+R+++P L +Q + L +
Sbjct: 108 EAAYFAEIMRAGIQSIGRGQFFAATGLGLTYGQTMRYVILPQAIRNMLPVLLTQTIILFQ 167

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++SL   +  +D +     I  + GQ + +       YLS+S+ +++ + RL  K++
Sbjct: 168 DTSLVYVISGSDFMGAVAKIAQRDGQLVLMYSFAALCYLSVSLSLSMLIRRLQTKMS 224


>gi|239928550|ref|ZP_04685503.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
 gi|291436875|ref|ZP_06576265.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
 gi|291339770|gb|EFE66726.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
          Length = 304

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 86/144 (59%), Gaps = 5/144 (3%)

Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + VS +   LY     L  Y A+ +AEIVR+G++++P+GQ E A+A+GL   +  RL+LL
Sbjct: 131 TNVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQAEGAMAIGLRKNQVMRLILL 190

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTG-QAIEIILIWMFIY 374
           PQA+ +++P + SQ + ++K+++L  AV  F +L++   T+    G   I  + +   ++
Sbjct: 191 PQAVTAMLPAIVSQLVVIVKDTALGGAVLTFPELLASANTMSGYYGANVIASLTVVSVLF 250

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           ++L+  +  F + L A++   ++ 
Sbjct: 251 IALNFALTSFASWLEARLRRSKRS 274


>gi|218560339|ref|YP_002393252.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218367108|emb|CAR04882.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|323951210|gb|EGB47085.1| inner membrane transport system [Escherichia coli H252]
          Length = 367

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|210618017|ref|ZP_03291852.1| hypothetical protein CLONEX_04085 [Clostridium nexile DSM 1787]
 gi|210149010|gb|EEA80019.1| hypothetical protein CLONEX_04085 [Clostridium nexile DSM 1787]
          Length = 233

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 105/206 (50%), Gaps = 22/206 (10%)

Query: 189 IFVFSFVLGIVLSLF----ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           I +F+ ++G+ + LF       +S++   +  K    +Y  T +I G P +V + + Y +
Sbjct: 34  ISIFAILIGVAIGLFIAVVKVTVSKNIFVRILKWFCNVY--TTVIRGTPVMVQLLIMYNM 91

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F      +  F+G            I     + A++AEI+R+G+ ++ RGQMEA  +LG
Sbjct: 92  VFTARDTNEI-FVGA-----------ICFGINSGAYVAEIIRAGIESIDRGQMEAGRSLG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
             + +  R +++PQA+++I+P L ++++ L+K +S+A  +   DL      I    G   
Sbjct: 140 FNYIQTMRYIIVPQAVKNILPALGNEFIVLIKETSVAGVIAVTDLTKAAQYI----GSTD 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
            I+L  +F+     ++I L + +L +
Sbjct: 196 FIVLPPLFVAAGCYLVIVLGLTKLQS 221


>gi|209546901|ref|YP_002278819.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538145|gb|ACI58079.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ Y  A  +E  R+ L ++   Q++A +ALGL        V+LPQA+   IP L S 
Sbjct: 95  IALTLYMGAITSETFRASLKSIGLEQLDACVALGLPRSAQVINVVLPQAVLRAIPTLLSN 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS----LSIMIALFMN 386
            ++L K S+L  AVG ADL+ VG  I N T + +E++ +   IY +    L+  ++L   
Sbjct: 155 CVSLFKESALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFAIAFPLTRAVSLIEG 214

Query: 387 RLNAKIAL 394
           R+  K+A+
Sbjct: 215 RILKKLAI 222


>gi|158424241|ref|YP_001525533.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331130|dbj|BAF88615.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 219

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 63/111 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I++S Y + ++ +I R  + AVP+ Q EA+  LG+T  +  R ++LPQA+R  
Sbjct: 85  PALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEASECLGMTRVQQFRHIILPQALRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +PP T   + ++KN+S+   +GF +L   G  I N T Q   + L    IY
Sbjct: 145 LPPTTGFAVQVVKNTSITSIIGFVELSRAGQLINNSTFQPFRVFLTVAAIY 195


>gi|116751368|ref|YP_848055.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116700432|gb|ABK19620.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 221

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 64/113 (56%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+I+EI+R  L++V +GQ +AA + G +  ++   V+LPQA+   +PPL S +  LLK S
Sbjct: 101 AYISEIIRGALLSVDKGQQDAAFSFGFSWLQSMTYVILPQAVSVALPPLVSSFSALLKES 160

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SL   +   +L  V   I  +T +A+E+ L    +Y  ++  +A    RL  K
Sbjct: 161 SLVSVLAITELTRVSQLIYTRTFRALEVYLAIGVLYFLMTWFVARLSKRLERK 213


>gi|326771647|ref|ZP_08230932.1| glutamate transport system permease protein GluD [Actinomyces
           viscosus C505]
 gi|326637780|gb|EGE38681.1| glutamate transport system permease protein GluD [Actinomyces
           viscosus C505]
          Length = 286

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 65/100 (65%), Gaps = 1/100 (1%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +T+S +F  L + +   T+A  AE+ RSG+ A+ RGQ EAA ALG++     RL+L PQA
Sbjct: 148 ATIS-DFWKLALPIVMCTSATTAEVFRSGVRALDRGQTEAAWALGMSPSLTMRLILAPQA 206

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +R ++P L +Q + ++K ++LA  + + +L+  G T+I Q
Sbjct: 207 LRLMLPTLITQMVTIIKGTTLAYVLAYPELMYRGSTMIGQ 246


>gi|269120912|ref|YP_003309089.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614790|gb|ACZ09158.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 265

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 103/185 (55%), Gaps = 11/185 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFM 267
           + F  K  + +  +YI+ F   G P +V   +   +++  PVL Q F+F     + P   
Sbjct: 67  KKFFIKLSQIIIKIYIAVFR--GTPMIVQAMV---IYYGLPVLLQRFDF----NLDPIPA 117

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L+I +S  T +++AEI+R G+ +V +GQ+E A A+G++H +  + ++ PQA+R+++P +
Sbjct: 118 ALFI-VSINTGSYMAEIIRGGIDSVDKGQLEGAQAIGMSHFQTMKSIIFPQAIRNVLPSV 176

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++++  +K++S+   +   +L     ++     +  E+ +I   IY  L+  I+L +  
Sbjct: 177 GNEFIINIKDTSVLNVISVTELFFTSKSLAGTYTRYYEVFIITSAIYFFLTFTISLILRF 236

Query: 388 LNAKI 392
           +  KI
Sbjct: 237 VEKKI 241


>gi|237730188|ref|ZP_04560669.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908794|gb|EEH94712.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 368

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|93006751|ref|YP_581188.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92394429|gb|ABE75704.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 245

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 7/137 (5%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P F S  IA S    A+ +E VR+ ++++P+GQ EA   +GLT+ +  R V+LPQ
Sbjct: 107 GVKLDP-FPSAIIAFSLNIGAYASETVRASILSIPKGQWEAGSTVGLTYLQTFRHVILPQ 165

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYL 375
           A+R  +PPL++ +++L+K++SLA  V   +L      I   T +  E +L+++    IY 
Sbjct: 166 ALRVSVPPLSNTFISLVKDTSLASLVLVTELFKQAQII---TARNYEFMLVYIEAAVIYW 222

Query: 376 SLSIMIALFMNRLNAKI 392
            + + +     RL  ++
Sbjct: 223 GICLFLTFIQGRLETRL 239


>gi|315649609|ref|ZP_07902694.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus vortex V453]
 gi|315275082|gb|EFU38457.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus vortex V453]
          Length = 217

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 18/223 (8%)

Query: 173 NRGLSF-PTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           N  + F PTL       + V  FS VL I +S FA  LSR       + +  +Y+  F  
Sbjct: 3   NSWIDFLPTLLKGAEITVLVAFFSAVLAIAMS-FAAGLSRLSKLWIVRTVTAVYVEIFR- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
               T +L+ L + L+F  P      FIG     P+ ++  +A+     A+ +EIVRS +
Sbjct: 61  ---GTSLLVQL-FWLYFALP------FIGIEL--PKMLAAILAIGFNFGAYGSEIVRSAV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVP+GQ EA++AL +   +    V+LPQA   ++PP  +Q + L+K++SL   +  ADL
Sbjct: 109 LAVPKGQWEASVALNMKPWQRMWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADL 168

Query: 350 VSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + N       EI+++ + +Y  ++ ++++ +  L  K
Sbjct: 169 TYQAMVLRNNYISWTTEILVLLLLMYFVIATLVSMAVRLLERK 211


>gi|291003747|ref|ZP_06561720.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 791

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 23/168 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           ++LPLL +  F I+ LP ++      +L   +PVLG          SP F+   +AL   
Sbjct: 350 RSLPLLVLLIF-IYNLPQVI-----PEL---RPVLG----------SP-FVVGLVALVLS 389

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEI R GL +V  GQ EAA ALG+ +    RLV++PQA R  +P L +Q++ +LK
Sbjct: 390 ETAYIAEIHRGGLKSVSVGQGEAARALGIPYGGVQRLVVIPQAFRVALPALGNQFITILK 449

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            +SL  ++  A+++ VG  +  Q  + +E +L     Y+   +++ LF
Sbjct: 450 LTSLVSSISLAEILLVGQRLYTQNFKVLETLLAVSIFYV---VLVTLF 494


>gi|86357909|ref|YP_469801.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282011|gb|ABC91074.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 216

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 59/95 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ EI R  + AVP+GQ EAA ALGL +    + V+LPQA++  +P
Sbjct: 85  WIAVAIAFTLHASAFLGEIWRGSIEAVPKGQTEAANALGLHYISRMKDVVLPQALKISMP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
                 + L+K +SLA  VGF +L   G  I NQT
Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQT 179


>gi|312961910|ref|ZP_07776407.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311283720|gb|EFQ62304.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 321

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 15/192 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249
           FS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D  
Sbjct: 94  FSVILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 146

Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           VLG    +  F   STV    +F +  + LS   AA+ AEI+R GLI V  GQ EAA AL
Sbjct: 147 VLGVPFTEVVFAEWSTVDVLSQFTTAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAAL 206

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   
Sbjct: 207 GLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 266

Query: 364 IEIILIWMFIYL 375
           I ++++    YL
Sbjct: 267 IPLLIVATVWYL 278


>gi|121609555|ref|YP_997362.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554195|gb|ABM58344.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 216

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 70/126 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S+ IAL+CY +A+  EI R  + +VP+ Q + + ALG ++ +  R V+LPQ++R   P
Sbjct: 86  FLSVTIALTCYASAYFGEIWRGSIQSVPQTQWQGSAALGFSYLEQMRHVVLPQSVRIATP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P     + L+KN+SLA  +G  +L      + N T + I +  +   +Y ++   + +  
Sbjct: 146 PTVGFMVQLVKNTSLASIIGMHELAHAAQYVNNVTLRPILVYGVVGAMYFAVCWPLYMLS 205

Query: 386 NRLNAK 391
            RL  K
Sbjct: 206 RRLEKK 211


>gi|315647911|ref|ZP_07901012.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315276557|gb|EFU39900.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 209

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 19/143 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F  FGLP L             PV+G++       V   F++  +A    
Sbjct: 61  RGTPLLLQMLFFCFGLPVL-------------PVIGEY------LVLDRFVAACLAFVLN 101

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+ +GQ EA+  LGL   + T  V+LPQ  R  +P ++++ + L+K
Sbjct: 102 YAAYFAEIFRGGLLAIDKGQYEASKVLGLNKWQTTTKVILPQMFRVALPAVSNESITLVK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
           +++L  AV   +L+    T +N+
Sbjct: 162 DTALLYAVAVPELLHFAYTAVNR 184


>gi|219853972|ref|YP_002471094.1| hypothetical protein CKR_0629 [Clostridium kluyveri NBRC 12016]
 gi|219567696|dbj|BAH05680.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 215

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 76/125 (60%), Gaps = 1/125 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA++AEI R+G+ ++ RGQ EAA ALG+ + +    +++PQA+R+++P + ++
Sbjct: 92  LAFTINYAAYLAEIFRAGIESIDRGQFEAAKALGMNYYETITKIIIPQAIRNVLPAVCNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+K+S+L   +G  DL+     ++ +    I    I   +YL ++ ++ +   +L  
Sbjct: 152 SINLVKDSALVATIGVGDLLRAAKEVVTRD-FTITPFFIAAALYLLITSVLVMGFRQLEK 210

Query: 391 KIALK 395
           K ++K
Sbjct: 211 KYSVK 215


>gi|153011068|ref|YP_001372282.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562956|gb|ABS16453.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 218

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P +++  IAL+ + +AF+ EI R  + AVP GQ EAA ALGL +    R V+LPQ
Sbjct: 80  GLGINP-WIAATIALTLHASAFLGEIWRGCIDAVPPGQREAATALGLRYYNRMRYVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A R  + P     + L+K +SLA  +GF +L   G  I N T
Sbjct: 139 AARISVAPTVGFLVQLIKGTSLAAIIGFTELTRQGQIINNAT 180


>gi|33596592|ref|NP_884235.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis 12822]
 gi|33601145|ref|NP_888705.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
 gi|33573293|emb|CAE37274.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33575580|emb|CAE32658.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 223

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 7/172 (4%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNF------IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           P   L AL  +     P+L Q  F      + G  +SP   +  +AL  + AA+ AE+ R
Sbjct: 52  PVSALTALVIEFVRSTPLLVQMYFLFYVLPVTGWQMSP-LTTGILALGLHYAAYCAEVYR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVPRGQ EAA AL L+  +    V+LPQA+  ++P L +  + + K++ L  A+  
Sbjct: 111 AGIEAVPRGQHEAATALNLSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L+     I + T +  E + +   ++L LS++ A  + RL A++ L   K
Sbjct: 171 VELLQQSKIIGSTTFRYTEPLTLVGVLFLLLSLVAAWGVRRLEARLKLYGGK 222


>gi|293605338|ref|ZP_06687723.1| amino acid ABC superfamily ATP binding cassette transporter
           [Achromobacter piechaudii ATCC 43553]
 gi|292816277|gb|EFF75373.1| amino acid ABC superfamily ATP binding cassette transporter
           [Achromobacter piechaudii ATCC 43553]
          Length = 217

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ E +  LG+T+ +  R ++LPQ ++ +
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLGMTYLQTLRRIVLPQMVQRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLLMTLVLTW 203

Query: 384 FMNRLNAKIALKEK 397
           F   +  + A  ++
Sbjct: 204 FFQHMEKRYAKYDQ 217


>gi|239978682|ref|ZP_04701206.1| putative ABC transporter permease protein [Streptomyces albus
           J1074]
          Length = 173

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 75/123 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + AA+ AEIVR+G+++V  GQ++AA +LG+   +  R ++LPQAMRSI+P   ++
Sbjct: 46  LGLALHQAAYAAEIVRAGVLSVDAGQLQAAASLGIPRLRQIRRIVLPQAMRSILPNAANE 105

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L K +S+   +   +L      I  + G+ + ++++    Y+ L+ ++++  + +  
Sbjct: 106 IISLFKGTSIVSVMAIGELFYQVQVIYGRNGRVVPLLMVATLWYVLLTTVLSVVQHHVEK 165

Query: 391 KIA 393
           + A
Sbjct: 166 RFA 168


>gi|297559646|ref|YP_003678620.1| polar amino acid ABC transporter inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296844094|gb|ADH66114.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 380

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 80/134 (59%), Gaps = 15/134 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL +  F      T+ L  + YQ+ FD P  G F       VS    ++   L+ Y
Sbjct: 142 RGIPLLMLIFF------TMALPIVAYQM-FDIPA-GTFQ------VS-ALAAVVTGLTLY 186

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             + +AE+ R+G++AVP+GQ EAA A+G+T  +  RL+L+PQA+ +++P + +Q + LLK
Sbjct: 187 NGSVLAEVFRAGVLAVPKGQSEAAQAIGMTRGQNMRLILIPQAITAMMPAIVAQLVVLLK 246

Query: 337 NSSLAVAVGFADLV 350
           +S+L   + F +++
Sbjct: 247 DSALGYIIAFPEML 260


>gi|190891585|ref|YP_001978127.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696864|gb|ACE90949.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 381

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 62/94 (65%), Gaps = 1/94 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV  + +   I +S + +A++AE++R GL A+P+GQ E A +LGL + +  RL+++PQ
Sbjct: 238 GWTVD-KLLRAIIGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLIIMPQ 296

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           A++ +IP + + ++ + K++SL   +   DL+ +
Sbjct: 297 AIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGI 330


>gi|209551038|ref|YP_002282955.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536794|gb|ACI56729.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 216

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 59/95 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ EI R  + AVP+GQ EAA ALGL +    + V+LPQA++  +P
Sbjct: 85  WIAVAIAFTLHASAFLGEIWRGSIEAVPKGQSEAANALGLHYVSRMKDVILPQALKISMP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
                 + L+K +SLA  VGF +L   G  I NQT
Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQT 179


>gi|111225074|ref|YP_715868.1| glutamate ABC transporter membrane protein [Frankia alni ACN14a]
 gi|111152606|emb|CAJ64347.1| putative glutamate transport protein (ABC superfamily, membrane)
           [Frankia alni ACN14a]
          Length = 197

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 54/82 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS Y  A + E VRSG+  V  GQ EAA ALGLT  ++ R+++LPQA R+++ PL S 
Sbjct: 71  VALSIYHGALVCEAVRSGINGVDLGQAEAARALGLTFTQSLRMIVLPQAFRNVLQPLGSV 130

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
              L++N+S+A A G  +L  V
Sbjct: 131 ISALIRNTSIAAAFGVQELTGV 152


>gi|41406150|ref|NP_958986.1| hypothetical protein MAP0052c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394498|gb|AAS02369.1| GlnQ [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 579

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 5/140 (3%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +GG T +  +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG ++  A RLV++
Sbjct: 418 VGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMRLVVV 477

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMF 372
           PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  +TG  +  ++    
Sbjct: 478 PQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAETGN-LSPLVAAGA 536

Query: 373 IYLSLSIMIALFMNRLNAKI 392
            YL L++ +   +N ++A++
Sbjct: 537 CYLILTVPLTHLVNMIDARL 556



 Score = 36.6 bits (83), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           T +  G  NT  L FS  +   ++G ++    +S  + + W  RVY +VFR +P +V
Sbjct: 349 TLLRTGLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVV 405


>gi|322833013|ref|YP_004213040.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168214|gb|ADW73913.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 221

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 11/161 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL++ T L   LP L++I   Y L+F   VL +++    +  SP+   L  AL+ Y A +
Sbjct: 52  LLHLYTSLTLALPLLIVI---YLLYF---VLPEYDI---TLTSPQVGVL--ALTLYYAPY 100

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IA++VRS +  +PRGQ EA   LGL+  +  R V+LPQ +  ++ PL    + L+K+S+L
Sbjct: 101 IAQVVRSAIEMLPRGQWEACRVLGLSRTEQLRDVVLPQTLPQMLSPLVGLMIGLIKDSAL 160

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              V   + +      I++T   +EI L     Y  L+ +I
Sbjct: 161 LSIVSVQEFMYAARQAISETYAPLEIYLTVALCYWVLNSLI 201


>gi|312972460|ref|ZP_07786634.1| general L-amino acid transport system permease aapM domain protein
           [Escherichia coli 1827-70]
 gi|310334837|gb|EFQ01042.1| general L-amino acid transport system permease aapM domain protein
           [Escherichia coli 1827-70]
          Length = 180

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 34  FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 93

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 94  LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 129


>gi|293395293|ref|ZP_06639578.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291422250|gb|EFE95494.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 280

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 79/135 (58%), Gaps = 3/135 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    I LS   +A+ AEI+R G++ V +GQ EAA ALGL   + T  ++LPQA+RSI+
Sbjct: 129 QFSVAVIGLSLVQSAYTAEIIRGGILGVEQGQHEAAAALGLPAYRRTFRIILPQALRSIL 188

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL- 383
           P   ++ ++L K +S+   +   +L      I N+T Q I ++++    YL ++ ++++ 
Sbjct: 189 PTGFNEVISLAKGTSIVYVLSMPELFYTVQVIYNRTQQVIPLLMVATVWYLLITTVLSIL 248

Query: 384 --FMNRLNAKIALKE 396
             ++ R  A+  +++
Sbjct: 249 QHYVERYFARGTVRQ 263


>gi|254773104|ref|ZP_05214620.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 602

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 5/140 (3%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +GG T +  +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG ++  A RLV++
Sbjct: 441 VGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMRLVVV 500

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMF 372
           PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  +TG  +  ++    
Sbjct: 501 PQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAETGN-LSPLVAAGA 559

Query: 373 IYLSLSIMIALFMNRLNAKI 392
            YL L++ +   +N ++A++
Sbjct: 560 CYLILTVPLTHLVNMIDARL 579



 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           T +  G  NT  L FS  +   ++G ++    +S  + + W  RVY +VFR +P +V
Sbjct: 372 TLLRTGLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVV 428


>gi|119946081|ref|YP_943761.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119864685|gb|ABM04162.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 216

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L+ +++AF+ +I RS + A+P+GQ EA   LGLTH ++ R V+ PQA++  I P    
Sbjct: 91  LSLTLFSSAFLHDIWRSCIEALPKGQWEACRTLGLTHVQSMRHVIFPQAIKMAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMN 386
            + ++K ++LA  +GF +L   G  + N T Q  ++     L++  I   LS++     N
Sbjct: 151 SVQIVKGTALASIIGFVELTKAGTMLNNATFQPFKVFALVALLYFVICFPLSVLARYLEN 210

Query: 387 R 387
           +
Sbjct: 211 K 211


>gi|330971469|gb|EGH71535.1| ABC transporter permease protein [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 223

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS Y  AF +EI R G++++  GQ EAA ALG+   +    +++PQA+R +IPPL +Q
Sbjct: 97  LCLSLYGGAFYSEIFRGGIMSIDEGQSEAARALGMRRFQVMWRIVIPQALRRMIPPLVNQ 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            +  LKN+SL   +   DL+  G  I + + + +E+
Sbjct: 157 SIMQLKNTSLLSVLALPDLLYQGQVIAHDSYRPLEV 192



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGA----GRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   W      +  TI+G LVG      RLS NK++    R YVE+FR  P LV + + 
Sbjct: 18  LITGLWYTLGTTVACTILGMLVGILTALPRLSNNKVLCAPFRAYVEIFRCTPVLVQLVWF 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|290960130|ref|YP_003491312.1| binding-protein-dependent ABC transporter transmembrane protein
           [Streptomyces scabiei 87.22]
 gi|260649656|emb|CBG72771.1| putative binding-protein-dependent transport system integral
           membrane component [Streptomyces scabiei 87.22]
          Length = 284

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L C   A+ +EIVR  + AVP  Q EA +AL  T  +  R ++LPQA   ++PP  + 
Sbjct: 114 LTLGCTYGAYGSEIVRGAVAAVPAAQREAGVALSFTPAQRMRKIVLPQAWPEMVPPFCNL 173

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G AD       + N TGQ+  +  + + +Y  L+  I   M ++  
Sbjct: 174 LIELLKGTALVSVLGVADTTFAAQLVRNATGQSAPVYSVILVMYFVLAFAITRVMRQVER 233

Query: 391 K 391
           +
Sbjct: 234 R 234


>gi|239833272|ref|ZP_04681600.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821335|gb|EEQ92904.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 241

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 96/176 (54%), Gaps = 10/176 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIA 282
           F++ G P LV      QL+     L QF  +  S + P     Y    +AL+  TAA+ A
Sbjct: 61  FVLRGTPLLV------QLYIIYYGLSQFPELRRSFLWPFLREPYWCAVLALALNTAAYSA 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R G+++V  GQ+EAA A G++     R +L PQA+R ++P  +++ + ++K+++LA 
Sbjct: 115 EIIRGGVLSVATGQIEAARAYGMSGFTLVRRILAPQALRQMLPAYSNEVILMVKSTALAS 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   ++  +   +I+ T + +E+ +    IYL L+ ++      L  +++  +++
Sbjct: 175 TITMMEVTGLAAKLISATYRPVEVFICAGAIYLLLNFVVTRIFKLLEYRLSAAQRQ 230


>gi|218510052|ref|ZP_03507930.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli Brasil 5]
          Length = 121

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 4/120 (3%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A  +E  R+ L ++ R Q++A +ALGL  R     V+LPQA+   +P L S  ++L K S
Sbjct: 2   AITSETFRASLKSIGREQLDACVALGLPQRVQVVNVVLPQAVLRAVPTLLSNCVSLFKES 61

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L  AVG ADL+ VG  I N T + +E++    LI+  I   L+  ++L   R+  K+A+
Sbjct: 62  ALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLIEGRILKKLAI 121


>gi|187921004|ref|YP_001890036.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187719442|gb|ACD20665.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 265

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 13/108 (12%)

Query: 259 GSTVSPEFMSLY---------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G  ++P  +SL+         +AL+  ++A+IAEI RSG+ +V RGQM A  ALG+T+  
Sbjct: 82  GQGLAPIGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRGQMSACQALGMTYWS 141

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVG 353
             R V++PQ +R I+P L +Q+++++K+SSL   +G      DL ++G
Sbjct: 142 GMRYVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIG 189


>gi|270290991|ref|ZP_06197214.1| polar amino acid transport system permease [Pediococcus
           acidilactici 7_4]
 gi|304385263|ref|ZP_07367608.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|270280387|gb|EFA26222.1| polar amino acid transport system permease [Pediococcus
           acidilactici 7_4]
 gi|304328470|gb|EFL95691.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 216

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 11/178 (6%)

Query: 222 LYISTFLIFGL-----PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYI 271
           L +  FL  GL     P   +I+    L    P+L Q  F F G  TV    P + +   
Sbjct: 33  LILGVFLALGLVSKFKPLQYIISAYVWLMRGTPLLLQLIFVFYGLPTVGIVFPRYEAALF 92

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A     AA+ AEI R GL +V +GQ EA   L +T+ + T+ V+LPQ  + ++P + ++ 
Sbjct: 93  AFILNYAAYFAEIFRGGLQSVDKGQYEAGRVLQMTYWQTTKKVVLPQVAKIVLPSIGNEV 152

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +NL+K+SSL   +G  DL+  G     +    +  IL+ + +YL L+ +   F+ ++ 
Sbjct: 153 INLVKDSSLVYVIGIGDLLRAGNVAAARDVTLVPFILVGI-MYLILTGICTFFLRKVE 209


>gi|242237974|ref|YP_002986155.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130031|gb|ACS84333.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 306

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 77/129 (59%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   +A+ AEI+R G++ V  GQ EAA ALGL   + T  ++LPQA+R+I+P   ++
Sbjct: 161 IGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQALRAILPTGFNE 220

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF---MNR 387
            ++L K +S+   +   +L      I N+T Q I ++++    YL+++ ++++    + R
Sbjct: 221 IISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATLWYLAITSVLSVLQYHVER 280

Query: 388 LNAKIALKE 396
             A+ A++E
Sbjct: 281 YVARGAVRE 289


>gi|258654440|ref|YP_003203596.1| polar amino acid ABC transporter inner membrane subunit
           [Nakamurella multipartita DSM 44233]
 gi|258557665|gb|ACV80607.1| polar amino acid ABC transporter, inner membrane subunit
           [Nakamurella multipartita DSM 44233]
          Length = 307

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 20/224 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RGL    LT+       V   VLG++L++   RLS +        +  +YI  F   G P
Sbjct: 68  RGL---WLTVWVTVAAMVIGIVLGVILAVM--RLSPN---PIVNGVAWIYIWFFR--GTP 117

Query: 234 TLVLI-------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LV I        L   +    P   QF +   + + P  +   +AL    AA++AEIVR
Sbjct: 118 VLVQIIFWVFLGQLYKYISLGIPFGPQFLYFNTTELIPVLVGGLLALGLNEAAYMAEIVR 177

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ALG+T  K  R ++LPQAMR I+PP  ++ +++LK +SL      
Sbjct: 178 AGISSVDSGQTEAAEALGMTRLKVMRRIVLPQAMRIIVPPTGNETISMLKTTSLLSVAAI 237

Query: 347 ADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNR 387
            +L      I     + I +++   IW  ++ S+  +   F+ +
Sbjct: 238 LELFGTVQLIYGSNYKQIPLLVVASIWYLVFTSVMSVGQYFLEK 281



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 15/90 (16%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  +L G   T W+  + M+   ++G ++   RLS N +V  +  +Y+  FR  P LV 
Sbjct: 62  FSPQVLRGLWLTVWVTVAAMVIGIVLGVILAVMRLSPNPIVNGVAWIYIWFFRGTPVLVQ 121

Query: 145 IFF------LYKSVLSVLPIPDHSIVLPFG 168
           I F      LYK +         S+ +PFG
Sbjct: 122 IIFWVFLGQLYKYI---------SLGIPFG 142


>gi|227820462|ref|YP_002824433.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339461|gb|ACP23680.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 219

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 17/192 (8%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           FA  L+R    K  +     YI   +I G+P L+++ L Y   +   + G F        
Sbjct: 37  FAVALARTSQLKPVRIAAASYIQ--IIQGIPVLMILFLSY---YGLSLAG-FEL------ 84

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P  ++   +++ Y + ++AEI R  + AVP+ Q EA+ +L +T  +  R V+LPQAMR 
Sbjct: 85  -PPLIAAGASMTIYASGYLAEIWRGCIQAVPKQQWEASESLAMTRLQQYRYVILPQAMRI 143

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLS 378
            +PP     + ++KN+S+   +GF +L   G  I N T Q   + L    ++  +   LS
Sbjct: 144 CLPPTVGFAVQVVKNTSITSIIGFVELARAGQLINNATFQPFRVFLAVAALYFVVCYPLS 203

Query: 379 IMIALFMNRLNA 390
            +  L   RL+A
Sbjct: 204 QLSRLLERRLHA 215


>gi|227495201|ref|ZP_03925517.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces coleocanis DSM 15436]
 gi|226831653|gb|EEH64036.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces coleocanis DSM 15436]
          Length = 314

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 2/110 (1%)

Query: 236 VLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +L  L  QL    P   +F  F   +  +P  M+L + L     A++AEI+R+GL +V +
Sbjct: 116 LLPVLYPQLSLGIPFGPEFVQFETKTYFTPMLMAL-VGLGLNEGAYLAEIIRAGLNSVDK 174

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           GQ EAA ALG+      R ++LPQ MR IIPPL ++ +++LK +SL  A+
Sbjct: 175 GQWEAATALGMNRSIILRRIILPQTMRVIIPPLGNETISMLKTTSLVSAI 224


>gi|194435100|ref|ZP_03067337.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella dysenteriae 1012]
 gi|194416662|gb|EDX32794.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella dysenteriae 1012]
 gi|320181544|gb|EFW56462.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella boydii ATCC 9905]
 gi|332087263|gb|EGI92396.1| general L-amino acid transport system permease protein aapM
           [Shigella boydii 5216-82]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|33592600|ref|NP_880244.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|33572246|emb|CAE41798.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
          Length = 223

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 7/172 (4%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNF------IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           P   L AL  +     P+L Q  F      + G  +SP   +  +AL  + AA+ AE+ R
Sbjct: 52  PVSALTALVIEFVRSTPLLVQMYFLFYVLPVTGWQMSP-LTTGILALGLHYAAYCAEVYR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVPRGQ EAA AL L+  +    V+LPQA+  ++P L +  + + K++ L  A+  
Sbjct: 111 AGIEAVPRGQHEAATALNLSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L+     I + T +  E + +   ++L LS++ A  + RL A++ L   K
Sbjct: 171 VELLQQSKIIGSTTFRYTEPLTLVGVLFLLLSLVAAWGVRRLEARLKLYGGK 222


>gi|323489287|ref|ZP_08094519.1| amino acid ABC transporter (permease) [Planococcus donghaensis
           MPA1U2]
 gi|323397174|gb|EGA89988.1| amino acid ABC transporter (permease) [Planococcus donghaensis
           MPA1U2]
          Length = 236

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 34/184 (18%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL     L +GLPTL                       G T+ P F +  I  S  
Sbjct: 79  RGTPLLVQLFILFYGLPTL-----------------------GITIDP-FPAAVIGFSLN 114

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ +E++R+ ++++P+GQ EAA  +G+++ ++ R V+LPQA R  +PPL++ +++L+K
Sbjct: 115 VGAYASEVIRAAILSIPKGQWEAAGTIGMSYTQSLRRVILPQASRVSLPPLSNTFISLVK 174

Query: 337 NSSLAVAVGFADLVSVGGTIINQT-------GQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++SLA  +   ++  V   I           GQA    L++  I  +LS++     NR +
Sbjct: 175 DTSLASLILVTEMFRVAQQIAATNYEFLLLYGQA---ALLYWVICFALSLVQGRLENRFD 231

Query: 390 AKIA 393
             I+
Sbjct: 232 RYIS 235


>gi|281180312|dbj|BAI56642.1| amino acid ABC transporter permease component [Escherichia coli
           SE15]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 126 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 172

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 173 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 221

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 222 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 277

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 278 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317


>gi|226360988|ref|YP_002778766.1| cystine ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226239473|dbj|BAH49821.1| cystine ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 222

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 14/172 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+     + + SF +G+V++L    L+R    +    L   Y+S  +I G P LV     
Sbjct: 20  TITMTIPLTIISFTIGLVIALLVA-LARISSIRPLSVLARFYVS--IIRGTPLLV----- 71

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
            QL      L QF    G T+ P F +  IA S     + AE++R+ ++++P+GQ EAA 
Sbjct: 72  -QLFIVFYALPQF----GVTLEP-FPAAVIAFSLNVGGYAAEVIRAAILSIPKGQWEAAQ 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            +G+ +    + ++LPQA R  +PPL++  ++L+K++SLA  +   +L+ V 
Sbjct: 126 TIGMGYTTTLQRIVLPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRVA 177


>gi|120608916|ref|YP_968594.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120587380|gb|ABM30820.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 217

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 1/106 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  VSP + +  I L+ YT+A++AE+ R  + A+PRGQ EA+ +L + + +  R V+L
Sbjct: 79  MAGFDVSP-WAAAAIGLTLYTSAYLAEVWRGCVQAIPRGQWEASSSLAMGYFQQMRHVVL 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           PQA+R  + P     + ++K +++A  +GF DL  +G  + N T Q
Sbjct: 138 PQAVRLAVAPTVGFSVQIVKGTAVASIIGFEDLTKLGSMLANATFQ 183


>gi|15890304|ref|NP_355976.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158505|gb|AAK88761.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 219

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++   +++ YT+ ++AEI R  + AVP+ Q EA+ +L LT  +  R V+LPQA+R  
Sbjct: 85  PPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESLALTRAQQYRYVILPQAIRIS 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +PP     + ++KN+S+A  +GF +L   G  I N T Q   +
Sbjct: 145 LPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQPFRV 187


>gi|15803805|ref|NP_289839.1| putative transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|15833397|ref|NP_312170.1| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|12517901|gb|AAG58399.1|AE005554_10 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13363616|dbj|BAB37566.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 222 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 281

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 282 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317


>gi|311277768|ref|YP_003939999.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308746963|gb|ADO46715.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|293449593|ref|ZP_06664014.1| general L-amino acid transport system permease [Escherichia coli
           B088]
 gi|291322683|gb|EFE62112.1| general L-amino acid transport system permease [Escherichia coli
           B088]
 gi|320202180|gb|EFW76755.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli EC4100B]
 gi|323946883|gb|EGB42899.1| inner membrane transport system [Escherichia coli H120]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|218691564|ref|YP_002399776.1| amino-acid ABC transporter membrane protein [Escherichia coli ED1a]
 gi|218429128|emb|CAR10071.2| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|229916002|ref|YP_002884648.1| polar amino acid ABC transporter inner membrane subunit
           [Exiguobacterium sp. AT1b]
 gi|229467431|gb|ACQ69203.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sp. AT1b]
          Length = 232

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 20/175 (11%)

Query: 221 LLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL---S 274
           L Y STF I    G+P L+++ + Y           F FIG      EF +L  A+   S
Sbjct: 60  LRYPSTFYISFMRGVPILIILFILYS---------GFPFIG-----IEFAALTAAILGFS 105

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             +AA+IAEI+RS + AV  GQ+EAA +LG+      + V+LPQA R  +PPL++ +L+L
Sbjct: 106 LNSAAYIAEIIRSSIRAVDDGQVEAARSLGMGKWLTLKGVVLPQATRIALPPLSNVFLDL 165

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +K SSLA  +   ++ +    +  +    + + ++   IY ++   ++ F   L 
Sbjct: 166 IKASSLAAMITVPEIFNKAKIVGGREFDYMTVYIVVALIYWAICTFMSFFQEWLE 220


>gi|118464237|ref|YP_879359.1| amino acid ABC transporter permease [Mycobacterium avium 104]
 gi|118165524|gb|ABK66421.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium avium 104]
          Length = 598

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 5/140 (3%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +GG T +  +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG ++  A RLV++
Sbjct: 437 VGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMRLVVV 496

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMF 372
           PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  +TG  +  ++    
Sbjct: 497 PQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAETGN-LSPLVAAGA 555

Query: 373 IYLSLSIMIALFMNRLNAKI 392
            YL L++ +   +N ++A++
Sbjct: 556 CYLILTVPLTHLVNMIDARL 575



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           T +  G  NT  L FS  +   ++G ++    +S  + + W  RVY +VFR +P +V
Sbjct: 368 TLLRTGLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVV 424


>gi|157158180|ref|YP_001464745.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           E24377A]
 gi|193066457|ref|ZP_03047502.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E22]
 gi|194430236|ref|ZP_03062733.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B171]
 gi|218555835|ref|YP_002388748.1| amino-acid ABC transporter membrane protein [Escherichia coli IAI1]
 gi|218696970|ref|YP_002404637.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|260846075|ref|YP_003223853.1| putative transport system permease protein [Escherichia coli
           O103:H2 str. 12009]
 gi|307314972|ref|ZP_07594560.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|331670096|ref|ZP_08370941.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA271]
 gi|331679344|ref|ZP_08380016.1| putative transport system permease protein [Escherichia coli H591]
 gi|157080210|gb|ABV19918.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E24377A]
 gi|192925886|gb|EDV80535.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E22]
 gi|194411707|gb|EDX28032.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B171]
 gi|218353702|emb|CAU99966.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218362603|emb|CAR00228.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|257761222|dbj|BAI32719.1| putative transport system permease protein [Escherichia coli
           O103:H2 str. 12009]
 gi|306905555|gb|EFN36087.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|315062569|gb|ADT76896.1| predicted amino-acid transporter subunit [Escherichia coli W]
 gi|323376844|gb|ADX49112.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|331063009|gb|EGI34923.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA271]
 gi|331073409|gb|EGI44732.1| putative transport system permease protein [Escherichia coli H591]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|297518226|ref|ZP_06936612.1| putative transport system permease protein [Escherichia coli OP50]
          Length = 227

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 81  FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 140

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 141 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 176


>gi|74313797|ref|YP_312216.1| putative transport system permease [Shigella sonnei Ss046]
 gi|73857274|gb|AAZ89981.1| putative transport system permease protein [Shigella sonnei Ss046]
 gi|332086438|gb|EGI91585.1| general L-amino acid transport system permease protein aapM
           [Shigella dysenteriae 155-74]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|332098839|gb|EGJ03796.1| general L-amino acid transport system permease protein aapM
           [Shigella boydii 3594-74]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|168764867|ref|ZP_02789874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4501]
 gi|217327153|ref|ZP_03443236.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. TW14588]
 gi|189365197|gb|EDU83613.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4501]
 gi|217319520|gb|EEC27945.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. TW14588]
 gi|326347536|gb|EGD71261.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. 1044]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|82778576|ref|YP_404925.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|309785601|ref|ZP_07680232.1| general L-amino acid transport system permease protein aapM
           [Shigella dysenteriae 1617]
 gi|81242724|gb|ABB63434.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|308926721|gb|EFP72197.1| general L-amino acid transport system permease protein aapM
           [Shigella dysenteriae 1617]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 222 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 281

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 282 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317


>gi|82545640|ref|YP_409587.1| transport system permease protein [Shigella boydii Sb227]
 gi|81247051|gb|ABB67759.1| putative transport system permease protein [Shigella boydii Sb227]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|258647026|ref|ZP_05734495.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260404467|gb|EEW98014.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 215

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 34/225 (15%)

Query: 183 MDTNAKIFVFSFVLGIVLSLF--ATRLSR--HFHEKTG------KALPLLYISTFLIFGL 232
           +  +A+IF+F+ VL + L +     R+S+   F +  G      +  PL+    F+ +GL
Sbjct: 15  LGVSAQIFIFTIVLSLPLGMLLAMVRISKVGLFRQAAGAYIYLMRGTPLMLQIMFIYYGL 74

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P          L FD  +              +F +  +A     AA+ AEI R G+ ++
Sbjct: 75  P----------LIFDLQI-------------SDFPAAILAFVANYAAYFAEIFRGGIQSI 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ E A  LG T+++    ++LPQ ++ +IPPL ++ + LLK++SL   +   DL+ V
Sbjct: 112 SKGQYEGAKVLGFTYKQTMWHIILPQVVKRVIPPLGNETITLLKDTSLVYILAMNDLMRV 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               + +       ++  +F YL  + ++   +  +  + A+ E+
Sbjct: 172 TRAFVQRDFDTTPFLVAGVF-YLVCTAVLTKILTYVENRYAVYEE 215


>gi|227822265|ref|YP_002826236.1| predicted amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227341265|gb|ACP25483.1| predicted amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 267

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 12/184 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RLS + +    + LP L     + +GL  LV   L   L +++PV  + N          
Sbjct: 86  RLSANIYTTIFRGLPELLTLFIVYYGLQILVQQFLA-TLGYEEPV--EIN---------A 133

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IAL    +A+ +E++ S   A+P+GQ EA  ALG    K  RL++LPQ +R  +P
Sbjct: 134 FVAGMIALGVVFSAYCSEVLLSAFKAIPQGQYEAGDALGFHRGKTMRLIILPQLVRIALP 193

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ LLK+++L   +G  D++   G     T QA +   +   ++L L+++ ++  
Sbjct: 194 GLGNLWMALLKDTALVSVIGLQDILRQTGQAARMTKQAFQFFGVACVLFLVLAMISSVVF 253

Query: 386 NRLN 389
           + L 
Sbjct: 254 SALE 257


>gi|261339908|ref|ZP_05967766.1| amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317819|gb|EFC56757.1| amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 307

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 83/153 (54%), Gaps = 3/153 (1%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F   + G+F  I    V  +F +  + L+   +A+ AEIVR G + V  GQ EAA ALGL
Sbjct: 130 FTDILWGRFETI---NVLGQFSTAVVGLTLVQSAYTAEIVRGGFLGVDHGQYEAAAALGL 186

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              + T  ++LPQA+R+I+P   ++ ++L K +++   +   +L      I N+T + I 
Sbjct: 187 PAWRRTVRIILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIP 246

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++++    YL ++ +++   + +   +A  E++
Sbjct: 247 LLMVGAVWYLVITTVLSAIQHVVERGLARSERR 279


>gi|209920743|ref|YP_002294827.1| amino acid ABC transporter permease [Escherichia coli SE11]
 gi|209914002|dbj|BAG79076.1| amino acid ABC transporter permease component [Escherichia coli
           SE11]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|157148850|ref|YP_001456169.1| hypothetical protein CKO_04683 [Citrobacter koseri ATCC BAA-895]
 gi|157086055|gb|ABV15733.1| hypothetical protein CKO_04683 [Citrobacter koseri ATCC BAA-895]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|170740013|ref|YP_001768668.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168194287|gb|ACA16234.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 216

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 1/139 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++ P + +  + LS + +AF+ EI R  +  VPRGQ +AA ALGL +   T LV++PQ
Sbjct: 79  GLSIDP-WGAAALGLSLHASAFLGEIWRGAIETVPRGQWQAATALGLGYWNRTALVIVPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  + P     + L+K +SLA  +GF ++      I N T +   +  +   +Y  + 
Sbjct: 138 AVRIAVAPTIGFLVQLIKATSLASIIGFVEITRAAQVINNATFRPFTLFGLVALVYFVIC 197

Query: 379 IMIALFMNRLNAKIALKEK 397
             ++ +  R+  K+A+  +
Sbjct: 198 WPLSAYSRRIERKLAVASR 216


>gi|33596591|ref|NP_884234.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis 12822]
 gi|33573292|emb|CAE37273.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
          Length = 213

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 69/118 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +   + L     A+ AE+VR  ++AVP GQ EAA+AL LT  +    ++LPQA+ ++
Sbjct: 82  PALLVGIVVLGANAGAYGAEVVRGAILAVPAGQREAAVALNLTRARTIWRIILPQAVPAM 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +PP  +  + LLKN++L   +   DL   G  + ++T +  EI  + + +Y +++++I
Sbjct: 142 LPPTGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLVLLLYFAVALVI 199


>gi|300718664|ref|YP_003743467.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064500|emb|CAX61620.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 366

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 240 FQSAYVAEVVRGGLQALPKGQTEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 299

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 300 KDTSLVIIIGLFDLFS 315


>gi|306816386|ref|ZP_07450518.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|222034986|emb|CAP77729.1| Inner membrane amino-acid ABC transporter permease [Escherichia
           coli LF82]
 gi|305849951|gb|EFM50410.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|312947828|gb|ADR28655.1| amino-acid transporter subunit; membrane component of ABC
           superfamily protein [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|191169154|ref|ZP_03030912.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B7A]
 gi|256018816|ref|ZP_05432681.1| amino acid ABC transporter permease component [Shigella sp. D9]
 gi|260857398|ref|YP_003231289.1| putative transport system permease protein [Escherichia coli
           O26:H11 str. 11368]
 gi|190900796|gb|EDV60587.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B7A]
 gi|257756047|dbj|BAI27549.1| putative transport system permease protein [Escherichia coli
           O26:H11 str. 11368]
 gi|323154325|gb|EFZ40527.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli EPECa14]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|189184716|ref|YP_001938501.1| probable glutamine transport system permease protein GlnP [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181487|dbj|BAG41267.1| probable glutamine transport system permease protein GlnP [Orientia
           tsutsugamushi str. Ikeda]
          Length = 205

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 99/180 (55%), Gaps = 23/180 (12%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           L+N  L  P +T+        F F++ ++L++  +R+S++   K G  +   YIS F   
Sbjct: 2   LSNIALGIP-VTLQYAFSAVCFGFIIAVLLTV--SRMSKYKLLKFGANI---YISVFR-- 53

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ + + Y           F+F     +S  F +  +  S  + A++AEI++SG+ 
Sbjct: 54  GTPLIIQLYVIY-----------FSF----KLSNVFYAGVLVFSLNSGAYVAEIIKSGIN 98

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V + Q+EAA+AL + +    + ++LPQA+R IIP L ++ +NLLK SS+   +G  DL+
Sbjct: 99  SVDKWQIEAALALNIPYFYIMKDIVLPQALRKIIPSLVNEVINLLKESSIISVLGGMDLM 158


>gi|332102248|gb|EGJ05594.1| his/Glu/Gln/Arg/opine ABC transporter permease [Shigella sp. D9]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|30064599|ref|NP_838770.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|56480303|ref|NP_709065.2| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30042858|gb|AAP18581.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|56383854|gb|AAN44772.2| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|313648621|gb|EFS13062.1| general L-amino acid transport system permease protein aapM
           [Shigella flexneri 2a str. 2457T]
 gi|324119450|gb|EGC13333.1| inner membrane transport system [Escherichia coli E1167]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|86138395|ref|ZP_01056969.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           MED193]
 gi|85824920|gb|EAQ45121.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           MED193]
          Length = 215

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 20/188 (10%)

Query: 191 VFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V + +LG++ ++  T  RLSR    +  + L   Y+S F   G P L+ +   + L+F  
Sbjct: 25  VLTAILGLICAMLGTAARLSRF---RVLRFLGAAYVSVFR--GTPALIQL---FILYFGG 76

Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P +G Q +          F +  I L     A++ E +R  +I+V +GQ EAA  LG++ 
Sbjct: 77  PQIGIQLD---------AFEAGVIGLGVNVGAYMTETMRGAIISVDKGQGEAARTLGMSK 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +A R V+LPQAMR +I PL      L+K+++L  A+   +L       I  T +  E+ 
Sbjct: 128 WQAMRNVILPQAMRLMIRPLGVNLNTLIKSTALVAAISVVELTYTAQRYIGSTYKPFEMF 187

Query: 368 LIWMFIYL 375
           LI   +Y+
Sbjct: 188 LIAGLLYM 195


>gi|227524319|ref|ZP_03954368.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088550|gb|EEI23862.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
          Length = 214

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 25/182 (13%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           + ++   +  PLL    F+ +GLP + +I  +Y                         +L
Sbjct: 53  NLYDWLMRGTPLLLQLIFVFYGLPVIGIIFERYD-----------------------AAL 89

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +  +  YTA F AEI R G  +VPRGQ E+A  L L++ +  R +++PQ  + ++P + +
Sbjct: 90  FAFILNYTAYF-AEIFRGGFQSVPRGQFESACVLRLSYGQTIRKIIIPQVFKIVLPSIGN 148

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +NL+K+SSL   +G  DL+  G     +    + ++L+ + IYL+L+ +  + +  + 
Sbjct: 149 EVINLVKDSSLVYVIGLGDLLRAGNVATARDVTLLPLVLVGI-IYLALTAICTIVLKVIE 207

Query: 390 AK 391
            +
Sbjct: 208 KR 209


>gi|295397439|ref|ZP_06807526.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294974340|gb|EFG50080.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 555

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 5/143 (3%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF     +S  F +L I +S  T A++AE++R G+ +V +GQ EAA A+G+ H +    
Sbjct: 399 FNF----QMSTMFAALLI-VSINTGAYLAEVIRGGITSVDKGQTEAARAIGMNHYQTMTT 453

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQA+RSI+P L ++++  +K++S+   +   +L  V  +    T    +  LI   I
Sbjct: 454 IVLPQAIRSILPALGNEFVINIKDTSVLNVIAVTELFFVTKSAAGSTYLTFQTFLITAII 513

Query: 374 YLSLSIMIALFMNRLNAKIALKE 396
           Y  L+      +N +  ++A K+
Sbjct: 514 YFVLTFTTTRVLNFIENRMAGKK 536


>gi|292670513|ref|ZP_06603939.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Selenomonas noxia ATCC 43541]
 gi|292647923|gb|EFF65895.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Selenomonas noxia ATCC 43541]
          Length = 247

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 2/117 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+I+E+ R+   AVPRGQ EAA++ GLT  +A R V+L Q     +P   +  +NLLK 
Sbjct: 102 GAYISEVFRAAYSAVPRGQYEAAVSAGLTPFQAFRHVMLGQTAIIALPNFGNAAINLLKE 161

Query: 338 SSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +G  DL+  G  II Q      IEI L  M +Y  + +++    + L  ++
Sbjct: 162 ASLAYTIGLIDLIGKGNLIIAQNFGAYGIEIYLACMLVYWVMVLLLEQVFHWLEKRL 218


>gi|293416695|ref|ZP_06659334.1| inner membrane amino-acid ABC transporter permease yhdY
           [Escherichia coli B185]
 gi|331654869|ref|ZP_08355869.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli M718]
 gi|291432051|gb|EFF05034.1| inner membrane amino-acid ABC transporter permease yhdY
           [Escherichia coli B185]
 gi|331048251|gb|EGI20328.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli M718]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|325062201|gb|ADY65891.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 219

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 61/103 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++   +++ YT+ ++AEI R  + AVP+ Q EA+ +L LT  +  R V+LPQA+R  
Sbjct: 85  PPLIAAGASMTIYTSGYLAEIWRGCIQAVPKQQWEASESLALTRAQQYRYVILPQAIRIS 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +PP     + ++KN+S+A  +GF +L   G  I N T Q   +
Sbjct: 145 LPPTVGFAVQVVKNTSIASIIGFVELARAGQLINNATFQPFRV 187


>gi|324115126|gb|EGC09090.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|323979010|gb|EGB74088.1| inner membrane transport system [Escherichia coli TW10509]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|312170820|emb|CBX79080.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|331649071|ref|ZP_08350159.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli M605]
 gi|330909321|gb|EGH37835.1| glutamate Aspartate transport system permease protein GltK
           [Escherichia coli AA86]
 gi|331042818|gb|EGI14960.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli M605]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PLVV + +Y   L +    D          +  R     TLT+   +    
Sbjct: 125 YIAVWAVIYPLVVWWLMYGGFLGL----DR---------VETRQWGGLTLTLIIASVGIA 171

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 172 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 220

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 221 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 276

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV+LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 277 GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|260434995|ref|ZP_05788965.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109]
 gi|260412869|gb|EEX06165.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109]
          Length = 324

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE VR GL A+P  Q EAA  LGL+ R+  +LV+LPQA+R  +P LT+Q + LL+N+S
Sbjct: 202 YIAEDVRGGLQAIPPTQREAAAVLGLSPRQVLQLVVLPQALRVALPSLTNQAVGLLQNTS 261

Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +G  +L+ +  +++      G+ +E+ L    +Y      +AL    L  ++
Sbjct: 262 LMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMALLARHLEVQL 317


>gi|258405417|ref|YP_003198159.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257797644|gb|ACV68581.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 360

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 92/182 (50%), Gaps = 25/182 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP++                       G T+SP   +L      Y
Sbjct: 199 RGTPLLLQLFFIYYGLPSM-----------------------GVTLSPLVAALLGLGLNY 235

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +A ++AEI+R  + ++  GQMEAA ALG+T+ +A R V++PQ  + ++PP+ ++++ L+K
Sbjct: 236 SA-YLAEIIRGAIQSIDSGQMEAAKALGMTYGQAMRRVIIPQTYKRLMPPVGNEFIALIK 294

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++L   +   +L+     + N T   I ++++   IYL  +    +   ++  ++   E
Sbjct: 295 DTALVSTIAMVELMRAADQLFN-TYFDITVLVLAAIIYLLFTSAFTVTFEKIEKRVGAYE 353

Query: 397 KK 398
            +
Sbjct: 354 NR 355


>gi|227115098|ref|ZP_03828754.1| putative ABC transporter, permease [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 314

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 77/135 (57%), Gaps = 3/135 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL   + T  ++LPQA+RSI+
Sbjct: 161 QFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPSSRRTVRIILPQALRSIL 220

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMI 381
           P   ++ ++L K +S+   +   +L      I N+T Q I +++   IW  +  ++  +I
Sbjct: 221 PTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWYLLITTVLSVI 280

Query: 382 ALFMNRLNAKIALKE 396
             ++ R  ++ A++E
Sbjct: 281 QYYVERYVSRGAVRE 295


>gi|218706885|ref|YP_002414404.1| amino-acid ABC transporter membrane protein [Escherichia coli
           UMN026]
 gi|293406872|ref|ZP_06650798.1| polar amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|298382613|ref|ZP_06992210.1| general L-amino acid transport system permease [Escherichia coli
           FVEC1302]
 gi|218433982|emb|CAR14899.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|291426878|gb|EFE99910.1| polar amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|298277753|gb|EFI19269.1| general L-amino acid transport system permease [Escherichia coli
           FVEC1302]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|193071516|ref|ZP_03052426.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E110019]
 gi|192955153|gb|EDV85646.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E110019]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|313618407|gb|EFR90430.1| arginine transport system permease protein ArtQ [Listeria innocua
           FSL S4-378]
          Length = 229

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 64/102 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 102 AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 161

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+
Sbjct: 162 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLV 203


>gi|292486752|ref|YP_003529622.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900846|ref|YP_003540215.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291200694|emb|CBJ47827.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552169|emb|CBA19206.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|282891083|ref|ZP_06299588.1| hypothetical protein pah_c045o107 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499076|gb|EFB41390.1| hypothetical protein pah_c045o107 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 147

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 76/136 (55%), Gaps = 5/136 (3%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++SP F++   AL   + A+I+EIVR G+ A+P GQ EAA  +GL   +  + ++LPQ
Sbjct: 13  GLSLSP-FVAGVTALGINSTAYISEIVRGGINAIPEGQWEAAHVIGLKPWQTLKGIILPQ 71

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL--- 375
            +R  +P LT++   L+K +S+ + +G A+L  V   I+ +    + I L    +YL   
Sbjct: 72  MLRITLPSLTNELTALIKETSILMVIGVAELTKVSKDIVTRELDPMTIYLTAACLYLVMT 131

Query: 376 -SLSIMIALFMNRLNA 390
            S+SI+      R  A
Sbjct: 132 SSVSILAQFIQKRGQA 147


>gi|218550554|ref|YP_002384345.1| amino-acid ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
 gi|218358095|emb|CAQ90741.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|260870021|ref|YP_003236423.1| putative transport system permease protein [Escherichia coli
           O111:H- str. 11128]
 gi|257766377|dbj|BAI37872.1| putative transport system permease protein [Escherichia coli
           O111:H- str. 11128]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|168802618|ref|ZP_02827625.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC508]
 gi|189375435|gb|EDU93851.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC508]
 gi|320189619|gb|EFW64278.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. EC1212]
 gi|320639916|gb|EFX09507.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320645632|gb|EFX14641.1| putative transport system permease protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320650942|gb|EFX19399.1| putative transport system permease protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320662013|gb|EFX29421.1| putative transport system permease protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320666849|gb|EFX33828.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|326337967|gb|EGD61801.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. 1125]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|33592599|ref|NP_880243.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|33601144|ref|NP_888704.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
 gi|33572245|emb|CAE41797.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|33575579|emb|CAE32657.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 213

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 69/118 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +   + L     A+ AE+VR  ++AVP GQ EAA+AL LT  +    ++LPQA+ ++
Sbjct: 82  PALLVGIVVLGANAGAYGAEVVRGAILAVPAGQREAAVALNLTRARTIWRIILPQAVPAM 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +PP  +  + LLKN++L   +   DL   G  + ++T +  EI  + + +Y +++++I
Sbjct: 142 LPPTGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLVLLLYFAVALVI 199


>gi|293412639|ref|ZP_06655362.1| polar amino acid ABC transporter [Escherichia coli B354]
 gi|331674785|ref|ZP_08375544.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA280]
 gi|291469410|gb|EFF11901.1| polar amino acid ABC transporter [Escherichia coli B354]
 gi|331068224|gb|EGI39620.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA280]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|260461491|ref|ZP_05809738.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259032561|gb|EEW33825.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 221

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 31/188 (16%)

Query: 195 VLGIVLSLF---ATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V+G+VL+++   A R+ R     + +  + +PL+ +   + +GLPT+V       L +  
Sbjct: 37  VIGLVLAVWYVSAGRVVRAVIAAYVEFIRNVPLILLVYLVFYGLPTVV------DLAYSA 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P                  S  + LS Y+ A++ E+ RSGL AVPRGQ++A  A+GLT  
Sbjct: 91  PT-----------------SFVLTLSVYSGAYLVEVFRSGLEAVPRGQLDAGKAIGLTPW 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEII 367
           +    V LP  +R  +P L++ +++L K++S+A  +   +L + G   IN  T + +E+ 
Sbjct: 134 QRLLHVRLPTMLRITLPALSNTFISLFKDTSIASVISVPEL-TYGAQWINFNTFRIVEVY 192

Query: 368 LIWMFIYL 375
           L+   +YL
Sbjct: 193 LVTTAMYL 200


>gi|224437620|ref|ZP_03658573.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter cinaedi CCUG 18818]
 gi|313144071|ref|ZP_07806264.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129102|gb|EFR46719.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 219

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 33/212 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLV 236
           LT+       V S +LG  L++     +R++  +  + L  +YI TF    L+  + T V
Sbjct: 19  LTLMVAVATCVISIILGTFLAI-----TRNYGGRIARTLAAIYIETFRNTPLLLWMLTAV 73

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            +   +    D  V G   F                 S YT++ +AEI+R GL ++P+GQ
Sbjct: 74  FVLPSFFGRADPAVWGTIGF-----------------SLYTSSVMAEIIRGGLNSIPKGQ 116

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA + G +       ++LPQ  R +IP L SQ +   K++S    +  A+L      I
Sbjct: 117 FEAAYSQGFSQFFTLFYIILPQTFRKVIPSLLSQIITTFKDTSFLAGLQIAELTYQSKII 176

Query: 357 INQTGQAIEIIL-------IWMFIYLSLSIMI 381
           + Q     EI+L       I+  +  SLS+++
Sbjct: 177 LAQLTSFEEILLMIGVVASIYFVVCFSLSVLV 208


>gi|110643516|ref|YP_671246.1| amino acid ABC transporter permease [Escherichia coli 536]
 gi|191173841|ref|ZP_03035362.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli F11]
 gi|218702042|ref|YP_002409671.1| amino-acid ABC transporter membrane protein [Escherichia coli
           IAI39]
 gi|110345108|gb|ABG71345.1| hypothetical amino-acid ABC transporter permease protein YhdY
           [Escherichia coli 536]
 gi|190905891|gb|EDV65509.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli F11]
 gi|218372028|emb|CAR19886.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|323966448|gb|EGB61882.1| inner membrane transport system [Escherichia coli M863]
 gi|327251364|gb|EGE63053.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli STEC_7v]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|227818837|ref|YP_002822808.1| ABC-type amino acid transport system, permease component
           [Sinorhizobium fredii NGR234]
 gi|36959095|gb|AAQ87520.1| Transporter [Sinorhizobium fredii NGR234]
 gi|227337836|gb|ACP22055.1| putative ABC-type amino acid transport system, permease component
           [Sinorhizobium fredii NGR234]
          Length = 216

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 59/95 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ EI R  + AVP+GQ EAA ALGL +    + ++LPQA++  +P
Sbjct: 85  WIAVAIAFTLHASAFLGEIWRGSIEAVPKGQTEAANALGLHYVSRMKDIILPQALKISMP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
                 + L+K +SLA  VGF +L   G  I NQT
Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQT 179


>gi|323162955|gb|EFZ48790.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli E128010]
          Length = 154

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 28  FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 87

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 88  KDTSLVIIIGLFDLFS 103


>gi|331684911|ref|ZP_08385503.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli H299]
 gi|331078526|gb|EGI49732.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli H299]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|156976755|ref|YP_001447661.1| arginine transporter permease subunit ArtQ [Vibrio harveyi ATCC
           BAA-1116]
 gi|156528349|gb|ABU73434.1| hypothetical protein VIBHAR_05530 [Vibrio harveyi ATCC BAA-1116]
          Length = 229

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV RGQ EAA ALG++   A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQAHAFVRIVLPQAIR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLGITLIT 205

Query: 382 ALFMNRLNAKIALK 395
              +  ++ K +++
Sbjct: 206 QRAVKLIDKKFSIQ 219


>gi|71733225|ref|YP_274660.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71553778|gb|AAZ32989.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 246

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|15612734|ref|NP_241037.1| amino acid ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10172783|dbj|BAB03890.1| amino acid ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 233

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 94/157 (59%), Gaps = 14/157 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+ +++  T L+R       K +  +Y+S  +I G P LV +   + + +  P +G
Sbjct: 42  SFTIGLFIAVL-TALARISGVAPLKMVARVYVS--IIRGTPLLVQL---FIIFYGLPSIG 95

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                   T+ P F +  I  S    A+ +EI+R+ ++++P+GQ EAA ++G+++ +A +
Sbjct: 96  -------VTIDP-FPAAVIGFSLNVGAYASEIIRAAILSIPKGQWEAAYSIGMSYPQALK 147

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++LPQA R  IPPL++ +++L+K++SLA  +  A++
Sbjct: 148 RIVLPQASRVSIPPLSNSFISLVKDTSLASLILVAEM 184


>gi|299535149|ref|ZP_07048474.1| amino acid ABC transporter, permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298729466|gb|EFI70016.1| amino acid ABC transporter, permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 218

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 20/179 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL     + FGLP L             PV+G++       V   F++  +     
Sbjct: 60  RGTPLLLQLLLICFGLPML-------------PVIGEY------LVLDRFVAACLGFILN 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+ +GQ EAA  LGL+  + T  V+LPQ  R  +P L+++ + L+K
Sbjct: 101 YAAYFAEIFRGGLLAIDKGQYEAAQVLGLSKWQTTTRVILPQMFRVALPALSNESVTLIK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++L  AV   +L+    T +N+    I    I   IYL +++++ +F   L  +   +
Sbjct: 161 DTALLYAVAVPELLHFAQTAVNRDF-TITPFFIAGAIYLVMTLVLTVFFKWLEKRFKFE 218


>gi|284923284|emb|CBG36378.1| ABC transporter, permease protein [Escherichia coli 042]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|281602646|gb|ADA75630.1| putative transport system permease protein [Shigella flexneri
           2002017]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|237752093|ref|ZP_04582573.1| polar amino acid ABC transporter [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376660|gb|EEO26751.1| polar amino acid ABC transporter [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 232

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 74/125 (59%), Gaps = 6/125 (4%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++EI+R G+++V  GQ EAA ALGL  +++ R V+ PQA+++ +P L ++++ LLK
Sbjct: 111 SGAYVSEIIRGGILSVDSGQNEAARALGLNSKQSMRFVVFPQALKNALPNLGNEFITLLK 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNRLNAKIA 393
            +S+A  V   DL     TI      + E ++ + F+   YL L I+ +  + +   K+ 
Sbjct: 171 ETSVANYVTVHDLTYAFKTI---GSASYEYMIPYFFLAVCYLVLVILASFIVKKYEGKLR 227

Query: 394 LKEKK 398
             +K+
Sbjct: 228 RSDKR 232


>gi|227887998|ref|ZP_04005803.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein YhdY [Escherichia coli 83972]
 gi|300991069|ref|ZP_07179490.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301047873|ref|ZP_07194920.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|227835394|gb|EEJ45860.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein YhdY [Escherichia coli 83972]
 gi|300300216|gb|EFJ56601.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300406990|gb|EFJ90528.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|315294823|gb|EFU54166.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
          Length = 347

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PL+V + +Y   L +  +               R     TLT+   +    
Sbjct: 105 YIAVWAVIYPLIVWWLMYGGFLGLERV-------------ETRQWGGLTLTLIIASVGIA 151

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 201 ----FMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV++PQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 257 GLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296


>gi|254254090|ref|ZP_04947407.1| ABC-type polar amino acid transport system ATPase component
           [Burkholderia dolosa AUO158]
 gi|124898735|gb|EAY70578.1| ABC-type polar amino acid transport system ATPase component
           [Burkholderia dolosa AUO158]
          Length = 590

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G+++V +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 164 ISP-FLAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPRSRQTTRIVLPQAMR 222

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLS 378
           +I+P   +  + L K +S+   +   +L      I  +  + I ++++   W  I L++ 
Sbjct: 223 AILPTAFNDLITLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATAWYLIILTVL 282

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 283 SAIQVQVERHYARGALR 299


>gi|227325812|ref|ZP_03829836.1| Polar amino acid ABC transporter, inner membrane subunit precursor
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 369

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 60/95 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ + A + AE++R GL +VPRGQ EAA+AL L +   T  ++LPQA+R  +
Sbjct: 228 KLLRIIIGIALFFACYQAEVIRGGLQSVPRGQYEAAMALNLGYWHTTTKIILPQALRICL 287

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           P +T+  +  +KN+S  + +G  D+++   +++  
Sbjct: 288 PAMTNHIIAAMKNTSFVIIIGLFDILTATSSVMQD 322


>gi|298346439|ref|YP_003719126.1| polar amino acid ABC transporter membrane subunit [Mobiluncus
           curtisii ATCC 43063]
 gi|298236500|gb|ADI67632.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane subunit [Mobiluncus curtisii ATCC 43063]
          Length = 303

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 20/136 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P++  + F+ +GLP     AL++Q  +                    +S+++ +S  
Sbjct: 80  RGTPMILQAVFIYYGLPYFTNNALQFQSMWG-------------------VSIFV-VSIN 119

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+IAE VR G+I+V  GQ E A A+G+TH +    V+LPQA+R+++P + + ++  +K
Sbjct: 120 TGAYIAESVRGGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIK 179

Query: 337 NSSLAVAVGFADLVSV 352
           ++S+   +GF++  SV
Sbjct: 180 DTSVMFIIGFSEFFSV 195


>gi|606211|gb|AAA58074.1| ORF_o368b [Escherichia coli str. K-12 substr. MG1655]
 gi|315617080|gb|EFU97690.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 3431]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|320656323|gb|EFX24235.1| putative transport system permease protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|169627382|ref|YP_001701031.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC
           19977]
 gi|169239349|emb|CAM60377.1| Probable amino acid ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 481

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 92/158 (58%), Gaps = 14/158 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SFV+G+V++L    L+R    +    L  +YIS  +I G P L+ + L +        L 
Sbjct: 290 SFVIGLVIAL-GVALARMSGHRVVTGLARIYIS--VIRGTPLLLQLFLIFFA------LP 340

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F    G  +SP F +  IA S     + AEI+RS ++++PRGQ EAA +LG+++     
Sbjct: 341 EF----GVKISP-FPAAVIAFSLNVGGYAAEIIRSSILSIPRGQWEAASSLGMSYSTTLW 395

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +++PQA R  +PPL++  ++L+K++SLA A+   D++
Sbjct: 396 RIVIPQASRVAVPPLSNTLISLVKDTSLASAILVTDVM 433


>gi|254229407|ref|ZP_04922823.1| ABC-type arginine transport system, permease component [Vibrio sp.
           Ex25]
 gi|262396867|ref|YP_003288720.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. Ex25]
 gi|269964163|ref|ZP_06178460.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269968081|ref|ZP_06182118.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|151938098|gb|EDN56940.1| ABC-type arginine transport system, permease component [Vibrio sp.
           Ex25]
 gi|262340461|gb|ACY54255.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. Ex25]
 gi|269827327|gb|EEZ81624.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269831118|gb|EEZ85280.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 229

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV RGQ EAA ALG++   A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQAHAFVRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLGITLIT 205

Query: 382 ALFMNRLNAKIALK 395
              +  ++ K +++
Sbjct: 206 QRAVKLIDKKFSIQ 219


>gi|331664879|ref|ZP_08365784.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA143]
 gi|331058127|gb|EGI30109.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA143]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|224476916|ref|YP_002634522.1| hypothetical protein Sca_1432 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421523|emb|CAL28337.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 491

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 59/80 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+    AA+IAEI+R+G+ AV +GQ EAA +LGL + +  + ++LPQA+++I+P L ++
Sbjct: 366 IAMVINCAAYIAEIIRAGINAVDKGQTEAARSLGLGYGQTMKTIILPQAIKNILPALGNE 425

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ ++K SS+   +G ++++
Sbjct: 426 FVTVIKESSIVSVIGVSEIM 445



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y++  + G  NT  ++  G++   + G ++   +LS+ K + W+  VY+E  R  P L
Sbjct: 281 TKYSSFFITGIKNTILISIIGVVLGAVFGAILALMKLSSFKPLKWLATVYIEFIRGTPLL 340

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 341 VQVFLVF 347


>gi|27468910|ref|NP_765547.1| ABC transporter (permease protein) [Staphylococcus epidermidis ATCC
           12228]
 gi|27316458|gb|AAO05633.1|AE016750_238 ABC transporter (permease protein) [Staphylococcus epidermidis ATCC
           12228]
          Length = 164

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 74/122 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS    A+ +EI+R G++++P+GQ EAA ++G+ +R+  + ++LPQA+R  IP L + 
Sbjct: 37  IGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNT 96

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L+L+K++SL   +  A++      + + T + + I L+   +Y  +  +I++      +
Sbjct: 97  FLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYLLVALMYWVVCFVISIIQGWYES 156

Query: 391 KI 392
           +I
Sbjct: 157 RI 158


>gi|300697545|ref|YP_003748206.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074269|emb|CBJ53814.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CFBP2957]
          Length = 250

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 18/206 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +F L ++L+L      R  H        L+Y+    + G+P L+ I   Y   F  P+L
Sbjct: 43  LAFPLSVLLALARLSPWRPLHASVTA---LVYV----VRGVPLLMWILWVY---FLVPLL 92

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              N  G       F ++   L  Y   +++E+VR+G+ A+P+GQMEAA ALG ++  A 
Sbjct: 93  IGNNVSG-------FTTMVCTLVIYEGVYLSEVVRAGIEALPKGQMEAARALGHSYFGAM 145

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIW 370
           RLV+LPQA+ +++P + +Q+++ +K ++L   +   +L      I N    +  +I  + 
Sbjct: 146 RLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQIFFML 205

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             IY  +   +      L  +IA K 
Sbjct: 206 AVIYFVVCWSLTRTARALEHRIAAKR 231


>gi|289646273|ref|ZP_06477616.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 246

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|282857607|ref|ZP_06266826.1| L-cystine transport system permease protein TcyL [Pyramidobacter
           piscolens W5455]
 gi|282584557|gb|EFB89906.1| L-cystine transport system permease protein TcyL [Pyramidobacter
           piscolens W5455]
          Length = 221

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 72/127 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  ++L C T+AF+AE  R+ L +V +GQ+EA  ++G+T  +A R  +LPQA     P
Sbjct: 91  FQATVVSLICNTSAFMAESFRAALESVDKGQIEACYSMGMTRAQAMRRAILPQAFVVAAP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + ++ ++K ++L   VG AD++         + +  E  L    +Y+++ +++  F+
Sbjct: 151 SIGNHFIGIIKGTALGFTVGLADVMGTAKMEAALSLRFFEAYLCVTIVYVAIVLIVEFFL 210

Query: 386 NRLNAKI 392
            R+  ++
Sbjct: 211 RRIERRL 217


>gi|253575106|ref|ZP_04852445.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845562|gb|EES73571.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 261

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 69/124 (55%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T AF++E++R+ + AV RGQ+EAA A+G+   +A   ++LPQA+   +P  ++  + 
Sbjct: 105 GLHTGAFMSEMIRASVTAVDRGQVEAAYAIGMKGHQAFTRIVLPQALAVAVPVFSNMVIA 164

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK++SLA  +G  +L     T+   T   IE  L   FIYL +S  +   +     ++ 
Sbjct: 165 LLKDTSLAFTLGVMELTGKAQTLGALTQHFIEAYLALAFIYLVVSFTLEKLLRAAERRLL 224

Query: 394 LKEK 397
             E+
Sbjct: 225 KHEQ 228


>gi|215488577|ref|YP_002331008.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|215266649|emb|CAS11088.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|320194756|gb|EFW69386.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli WV_060327]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|77461682|ref|YP_351189.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77385685|gb|ABA77198.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 216

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 1/104 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  +SP +M+  IAL+ +T+A++AEI R  + A+P GQ EA+ +L L   +  R V+L
Sbjct: 78  LAGVEISP-WMAAAIALTLFTSAYLAEIWRGCVEAIPHGQWEASSSLALNPLEQLRYVIL 136

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PQA+R  + P     + ++K +++   +GF +L   GG + N T
Sbjct: 137 PQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 180


>gi|330684749|gb|EGG96444.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 486

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 59/80 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI R+G+ ++ +GQ EAA +LGL++ +  + V++PQA+++I+P L ++
Sbjct: 361 IALVINSSAYIAEIFRAGINSIDKGQTEAARSLGLSYNQTMKSVIMPQAIKNILPALGNE 420

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 421 FVTLIKESSIVSTIGVGEIM 440



 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)

Query: 40  IFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWL 99
           I L  +N   N +   NL     ++S+ A    D G   YT    Y +  + G  NT  +
Sbjct: 239 ILLKKLNQTINEVNDKNLI--DKYMSKAANDMQDDGNF-YTK---YKSFFIKGLENTILI 292

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +F G++   I+G  +   +LS  K ++WI  +Y+E  R  P LV +F ++
Sbjct: 293 SFIGVVLGAILGAFIALMKLSKFKPLSWIASIYIEFLRGTPLLVQVFIVF 342


>gi|313617523|gb|EFR89868.1| L-cystine transport system permease protein TcyM [Listeria innocua
           FSL S4-378]
          Length = 236

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 67/123 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A++ EI+RSG+IAV  GQMEAA ++G TH +A R VLLPQA  + +P  T+ 
Sbjct: 107 IALSFTAGAYLTEILRSGIIAVDIGQMEAAYSMGYTHGQAIRKVLLPQAFMTSLPNFTNL 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  L  +S+A  V   ++  +   + +     +E  +    IY  L+I+I      L  
Sbjct: 167 CIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLEAFIGAALIYWFLTILIEAINYILEK 226

Query: 391 KIA 393
            IA
Sbjct: 227 NIA 229


>gi|296271867|ref|YP_003654498.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096042|gb|ADG91992.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 216

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 70/130 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I LS  TAAF AEI+R G   +P GQ E A + G T  +    + LPQ +R +
Sbjct: 85  PSIAAAIITLSMNTAAFQAEILRGGFQTIPHGQKETAWSYGYTPFQCLYYIELPQVIRKV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P LT++ ++++KNS+L   +   DL+ V     + T + IE  +    +YL L+  I++
Sbjct: 145 LPSLTNEIIDIIKNSALISTIAVIDLMRVTQVYSSTTYRPIEFFVSAGLLYLLLTSCISI 204

Query: 384 FMNRLNAKIA 393
               + +++ 
Sbjct: 205 LGRYIESRLT 214



 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +L G   T W++   ++   I   ++  GRLS+N  + +ICR Y+   R  P LV
Sbjct: 14  LLNGLWMTTWISLLSILIGFIFSIILCLGRLSSNTFINFICRFYISAIRGTPLLV 68


>gi|239631652|ref|ZP_04674683.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526117|gb|EEQ65118.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 218

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 35/189 (18%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-----------PLLYI 224
           LS   +T+   A   + S  LG++LS+      +    K GK L           PLL  
Sbjct: 12  LSGVKMTLGIFAITLIGSIPLGLILSVGLIPKPKSILGKAGKGLLEGYVWVFRGTPLLLQ 71

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F+ +GLP + L+       FD+                 F +  +A     A + AEI
Sbjct: 72  LMFIFYGLPIIGLV-------FDR-----------------FSAALVAFILNYATYFAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G  A+  GQ EA+  L +T  +A R V++PQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 108 FRGGFGAIDEGQFEASTVLNMTRWQALRYVVIPQVVKIVLPSIGNEVINLVKDSSLVYVI 167

Query: 345 GFADLVSVG 353
           G  DL+  G
Sbjct: 168 GLGDLLRAG 176


>gi|254454563|ref|ZP_05068000.1| polar amino acid ABC transport permease protein AapM-1
           [Octadecabacter antarcticus 238]
 gi|198268969|gb|EDY93239.1| polar amino acid ABC transport permease protein AapM-1
           [Octadecabacter antarcticus 238]
          Length = 775

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 9/115 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA+IAE++R GL A+  GQ E A +LGL++ ++ RL++LPQAM+  IP + + 
Sbjct: 646 IMVTLFAAAYIAEVIRGGLAALATGQYEGADSLGLSYWQSMRLIVLPQAMKISIPGIVNT 705

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI-ALF 384
           ++ L K+++L V +G +D +     I   T         W  IY  L + I ALF
Sbjct: 706 FIGLFKDTTLVVFIGLSDPIGFSNLIRADTD--------WNGIYWELFVFIGALF 752


>gi|170018487|ref|YP_001723441.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|194440026|ref|ZP_03072083.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 101-1]
 gi|253771899|ref|YP_003034730.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254163205|ref|YP_003046313.1| putative amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|169753415|gb|ACA76114.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|194421030|gb|EDX37060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 101-1]
 gi|242378804|emb|CAQ33596.1| yhdY, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253322943|gb|ACT27545.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975106|gb|ACT40777.1| predicted amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|253979262|gb|ACT44932.1| predicted amino-acid transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|323941637|gb|EGB37816.1| inner membrane transport system [Escherichia coli E482]
 gi|323970315|gb|EGB65585.1| inner membrane transport system [Escherichia coli TA007]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|326792531|ref|YP_004310352.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326543295|gb|ADZ85154.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 229

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  I L+ ++ A+I+EI R  + ++ +GQ EAA ALG+T  +A R ++LPQA +  IP
Sbjct: 98  FSSAIIGLAFHSGAYISEIFRGAIESIDKGQNEAAKALGMTKLQAMRRIILPQAFKRSIP 157

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMI 381
            L +Q++  +K+SSLA A+   +++ +     +    A  I  +    ++ I LSL+ ++
Sbjct: 158 ALGNQFIIAIKDSSLASAITITEIIMLTRQYASIKFDAFPIFFVAALYYLIITLSLTKLL 217

Query: 382 ALFMNRLN 389
           A    RL 
Sbjct: 218 AYIEKRLK 225


>gi|296117709|ref|ZP_06836293.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
 gi|295969440|gb|EFG82681.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
          Length = 228

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 75/122 (61%), Gaps = 1/122 (0%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE +RSG+  V  GQ EAA ++GL+     R ++ PQA+R+ I PL +  + L 
Sbjct: 107 YTSAFVAESLRSGINTVDFGQAEAARSIGLSFSDMFRKIVFPQAVRAAIVPLGNTLIALT 166

Query: 336 KNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           KN+++A  +G A+  + +  TI N   Q   I  ++   ++ L++ + L + +L+ K+A+
Sbjct: 167 KNTTIASTIGVAEASLLMKSTIENHANQLFIIFFVFALGFIILTLPMGLGLGKLSEKMAV 226

Query: 395 KE 396
           K+
Sbjct: 227 KK 228


>gi|328948377|ref|YP_004365714.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328448701|gb|AEB14417.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 222

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 68/122 (55%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+  EI R+G+  V  GQMEA  +LGL + +   +++ PQA ++++P  TS+++ L+K
Sbjct: 101 SGAYCTEIFRAGIQGVDSGQMEAGRSLGLNYWQTLTMIIFPQAAKAVLPTYTSEFIVLIK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+A  +   DL   G  I N T  A   +L    IYL L++ +    + L  ++A  +
Sbjct: 161 ETSVASFIAVMDLTKAGDMIRNATYNAWIPLLSCALIYLCLTLGLTKLFSILEKRMAKSD 220

Query: 397 KK 398
           + 
Sbjct: 221 RD 222


>gi|326388277|ref|ZP_08209880.1| polar amino acid ABC transporter, inner membrane subunit
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207443|gb|EGD58257.1| polar amino acid ABC transporter, inner membrane subunit
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 242

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 67/108 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++C  +A+IAE++R  L A+P GQ+EAA+A G+      RL++LPQ +R  +P   ++
Sbjct: 107 LAMTCCCSAYIAEVLRGALAAIPAGQIEAALACGMGRVTRLRLIVLPQMLRLALPAYGNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + ++K++SLA  +   D+  V   +I  + + +++  +   +YL L+
Sbjct: 167 LVMMVKSTSLASTITVLDVTGVAQQVIAHSYRTLDVFCLAAGVYLGLT 214


>gi|195977745|ref|YP_002122989.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974450|gb|ACG61976.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 159

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 12/135 (8%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFN 255
           G ++ L  T + R  H K    L  LY+  F   G P +V I + +  LHF+        
Sbjct: 31  GTIIGLLVTLIKRS-HIKPLSWLVSLYVWIFR--GTPMVVQIMIAFAWLHFN-----HLP 82

Query: 256 FIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            IG   +  +F  L    I +S  + A+I+EIVR+G+ AVP+GQ+EAA +LG+  + A R
Sbjct: 83  IIGFGVLDLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPKGQLEAAYSLGIRPKHAMR 142

Query: 313 LVLLPQAMRSIIPPL 327
            V+LPQA+R+I+P L
Sbjct: 143 YVILPQALRTILPAL 157


>gi|89110030|ref|AP_003810.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|90111567|ref|NP_417736.2| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|170082798|ref|YP_001732118.1| amino-acid ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188494363|ref|ZP_03001633.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 53638]
 gi|238902368|ref|YP_002928164.1| putative amino-acid transporter subunit [Escherichia coli BW2952]
 gi|254038436|ref|ZP_04872494.1| inner membrane amino-acid ABC transporter permease yhdY
           [Escherichia sp. 1_1_43]
 gi|256024156|ref|ZP_05438021.1| putative amino-acid transporter subunit [Escherichia sp. 4_1_40B]
 gi|307139958|ref|ZP_07499314.1| putative amino-acid transporter subunit [Escherichia coli H736]
 gi|331643970|ref|ZP_08345101.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli H736]
 gi|3916018|sp|P45768|YHDY_ECOLI RecName: Full=Inner membrane amino-acid ABC transporter permease
           protein yhdY
 gi|85676061|dbj|BAE77311.1| predicted amino-acid transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|87082239|gb|AAC76302.2| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|169890633|gb|ACB04340.1| predicted amino-acid transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|188489562|gb|EDU64665.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 53638]
 gi|226840060|gb|EEH72081.1| inner membrane amino-acid ABC transporter permease yhdY
           [Escherichia sp. 1_1_43]
 gi|238862153|gb|ACR64151.1| predicted amino-acid transporter subunit [Escherichia coli BW2952]
 gi|260447704|gb|ACX38126.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|309703689|emb|CBJ03030.1| ABC transporter, permease protein [Escherichia coli ETEC H10407]
 gi|315137853|dbj|BAJ45012.1| putative amino-acid transporter subunit [Escherichia coli DH1]
 gi|323936246|gb|EGB32538.1| inner membrane transport system [Escherichia coli E1520]
 gi|331037441|gb|EGI09665.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli H736]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|301028302|ref|ZP_07191562.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|299878645|gb|EFI86856.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
          Length = 367

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|295703709|ref|YP_003596784.1| putative amino acid ABC transporter permease [Bacillus megaterium
           DSM 319]
 gi|294801368|gb|ADF38434.1| putative amino acid ABC transporter, permease protein [Bacillus
           megaterium DSM 319]
          Length = 233

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 99/179 (55%), Gaps = 21/179 (11%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL +  FL+ FGLP L+L+     +H D     +  F            L IA S 
Sbjct: 64  RCTPLL-VQLFLVYFGLPQLLLL-----VHIDINSWSRITF------------LVIAFSL 105

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +TAA ++E++RS   ++ +GQ EAA ++G+ + ++ R ++LPQA  + +P + +  ++LL
Sbjct: 106 HTAAPLSEVIRSAYFSIDKGQFEAAYSIGMNYFQSLRRIILPQAFVAALPNVGNATISLL 165

Query: 336 KNSSLAVAVGFADLVSVGGTII-NQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K+++LA ++G  D++     I+ N  G  + EI +    +Y S+ I+I + ++ L   +
Sbjct: 166 KDTALAFSIGIIDIMGQVRLILGNNYGIGMFEIYVTISLVYWSICIVIEIIVSYLEKHL 224


>gi|290961427|ref|YP_003492609.1| binding-protein-dependent transporter subunit [Streptomyces scabiei
           87.22]
 gi|260650953|emb|CBG74071.1| putative binding-protein-dependent transport system subunit
           [Streptomyces scabiei 87.22]
          Length = 277

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 25/209 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL---VLIALKYQLHF 246
           FVF  VLG+V++L        +    G     +YI  F   GLP L   + I +   L F
Sbjct: 81  FVFGLVLGMVIALMRLSSVGPYRWFAG-----VYIEIFR--GLPALLIFIFIGVAVPLAF 133

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                     I G T    +  + +AL    AA++AE +R+G+ AVP+GQ+EAA +LG +
Sbjct: 134 PG------TQIPGGT----YGKVALALGLVAAAYMAETIRAGIQAVPKGQLEAARSLGFS 183

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
             +A   +++PQA R I+PPLT++ + L K+SSL + +G      +L   G  + + T  
Sbjct: 184 PARAMVSIIVPQAFRIILPPLTNELVLLFKDSSLVLFLGVTLEERELSKYGRDLASTTAN 243

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   IL+    YL ++I +   + R+ AK
Sbjct: 244 STP-ILVAGLCYLLVTIPLGFVVRRMEAK 271



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 37/77 (48%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++  +   I +   NT     SG +   ++G ++   RLS+     W   VY+E+FR +P
Sbjct: 58  AEQMFPDVITLALKNTVLYTLSGFVFGLVLGMVIALMRLSSVGPYRWFAGVYIEIFRGLP 117

Query: 141 PLVVIFFLYKSVLSVLP 157
            L++  F+  +V    P
Sbjct: 118 ALLIFIFIGVAVPLAFP 134


>gi|86605398|ref|YP_474161.1| cystine ABC transporter, permease protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86553940|gb|ABC98898.1| cystine ABC transporter, permease protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 234

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 19/180 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            +L  LY+S  L+ G P  +     YQ       L Q   + GS     F S  +ALS  
Sbjct: 70  SSLSALYVS--LMRGTPLFLQFLFIYQ------ALPQLGLVFGS-----FTSAVLALSLN 116

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++EI R+G+ A+P GQ EAA ALGL   +    ++LPQA R ++P + +Q++ + K
Sbjct: 117 YGAYMSEIFRAGIQAIPIGQREAAYALGLKPWQTLWCIILPQAFRIVLPDIGNQFIAMQK 176

Query: 337 NSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +++LA A+   +L+      G       +A+ +  +W   Y  L+++++ F  RL   +A
Sbjct: 177 DTALASAIALQELMGRARQAGLPRQHFFEALVVAALW---YWLLTLILSFFQGRLERYLA 233


>gi|325970437|ref|YP_004246628.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta sp. Buddy]
 gi|324025675|gb|ADY12434.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 217

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ YT AF   +V + ++A+P+ Q EA+++ G ++ +    V++PQAM+  +P LT+Q
Sbjct: 95  LGLALYTGAFGIAVVEASILAIPKQQSEASMSQGFSYLQTMVHVVIPQAMKIALPSLTNQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KNSS+   +   DL+    +  ++T       L+   +YLS+ + ++  + R+ A
Sbjct: 155 AVNLIKNSSVLAMIAGGDLMYRSDSWASETAVYGPTFLVTGLLYLSICLPLSRLVKRMEA 214

Query: 391 KI 392
           K+
Sbjct: 215 KV 216


>gi|315655010|ref|ZP_07907914.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
 gi|315490666|gb|EFU80287.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
          Length = 303

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 20/136 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P++  + F+ +GLP     AL++Q  +                    +S+++ +S  
Sbjct: 80  RGTPMILQAVFIYYGLPYFTNNALQFQSMWG-------------------VSIFV-VSIN 119

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+IAE VR G+I+V  GQ E A A+G+TH +    V+LPQA+R+++P + + ++  +K
Sbjct: 120 TGAYIAESVRGGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIK 179

Query: 337 NSSLAVAVGFADLVSV 352
           ++S+   +GF++  SV
Sbjct: 180 DTSVMFIIGFSEFFSV 195


>gi|312968399|ref|ZP_07782608.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 2362-75]
 gi|312286617|gb|EFR14528.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 2362-75]
 gi|323189118|gb|EFZ74402.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli RN587/1]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|260889289|ref|ZP_05900552.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Leptotrichia hofstadii F0254]
 gi|260860700|gb|EEX75200.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Leptotrichia hofstadii F0254]
          Length = 245

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 66/94 (70%), Gaps = 5/94 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   +AA++ E +RSG+ ++ +GQMEAA A G+ +R A   +++PQA+++I+P L ++
Sbjct: 121 IALGLNSAAYVEETIRSGIESIDKGQMEAARATGMPYRMAMNEIIMPQAIKNILPALLNE 180

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++NL K +++   VG+  +V +  T+ +++ QA+
Sbjct: 181 FINLFKETAV---VGYISVVDI--TMNSKSLQAV 209


>gi|253576621|ref|ZP_04853949.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844035|gb|EES72055.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 251

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 77/132 (58%), Gaps = 1/132 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +++I +S  T A++AEIVR G+ +V +GQ EAA A+G+TH +  R V+LPQ +R I+P
Sbjct: 116 FAAIFI-VSINTGAYMAEIVRGGIYSVDKGQFEAAHAIGMTHWQTMRNVVLPQVIRHILP 174

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  +K++S+   +  ++L  +  +I     +  E   +   +YL +++ +   +
Sbjct: 175 ATGNQFIINIKDTSVLNVISVSELYFMTKSIAGNNFRYFESFFVASVLYLIMTLTVTKIL 234

Query: 386 NRLNAKIALKEK 397
            R+  ++   E 
Sbjct: 235 QRIEKRLDGPES 246


>gi|218658873|ref|ZP_03514803.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli IE4771]
          Length = 216

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 57/82 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S + +A++AE++R GL A+P+GQ E A +LGL + +  RLV++PQA++ +IP + + 
Sbjct: 119 IGVSIFASAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKMRLVIMPQAIKLVIPGIVNT 178

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ + K++SL   +   DL+ +
Sbjct: 179 FIGMFKDTSLVSIISMFDLLGI 200


>gi|86609572|ref|YP_478334.1| cystine ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558114|gb|ABD03071.1| cystine ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 248

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 19/180 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            +L  LY+S  L+ G P  +     YQ       L Q   + GS     F S  +ALS  
Sbjct: 84  SSLSALYVS--LMRGTPLFLQFLFIYQ------ALPQLGLVFGS-----FTSAVLALSLN 130

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++EI R+G+ A+P GQ EAA ALGL   +    ++LPQA R ++P + +Q++ + K
Sbjct: 131 YGAYMSEIFRAGIQAIPIGQREAAYALGLKPWQTLWCIILPQAFRIVLPDIGNQFIAMQK 190

Query: 337 NSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +++LA A+   +L+      G       +A+ +  +W   Y  L+++++ F  RL   +A
Sbjct: 191 DTALASAIALQELMGRARQAGLPRQHFFEALVVAALW---YWLLTLILSFFQGRLERYLA 247


>gi|320095231|ref|ZP_08026931.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977835|gb|EFW09478.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 225

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 55/85 (64%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + AA + ++VR  LI++PR Q E+A ALGL  R+A R V+LPQ +R + PP  +    
Sbjct: 100 TLWGAAEMGDLVRGALISIPRHQYESAEALGLDARQAMRFVILPQTVRRLAPPAVNLVTR 159

Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358
           ++K +SL V +G  +++ VG  II+
Sbjct: 160 MVKTTSLVVLIGVVEVLKVGQQIID 184


>gi|315300935|gb|EFU60155.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
          Length = 347

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 28/220 (12%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+ V+  I PL+V + +Y   L +  +               R     TLT+   +    
Sbjct: 105 YIAVWAVIYPLIVWWLMYGGFLGLERV-------------ETRQWGGLTLTLIIASVGIA 151

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +   GI+L+L      R  H    + L +++I  +   G+P   LI + +      P+ 
Sbjct: 152 GALPWGILLAL-----GRRSHMPIVRILSVIFIEFWR--GVP---LITVLFMSSVMLPL- 200

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K  
Sbjct: 201 ----FMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ 256

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            LV++PQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 257 GLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 296


>gi|312958425|ref|ZP_07772945.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311286968|gb|EFQ65529.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 229

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 27/198 (13%)

Query: 195 VLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +LG++L+  L   R S+ ++ ++   LP  YI  F   G P LV + L Y        L 
Sbjct: 29  ILGLILAIPLGIARSSKRWYVRS---LPYAYI--FFFRGTPLLVQLFLVYY------GLA 77

Query: 253 QFNFIGGSTVSPEFMSLYI---------ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           QF+ I  S     FM  Y+          ++ +TAA+IAEI+R  + A+P G++EAA AL
Sbjct: 78  QFDSIRSS-----FMWTYLRDPFWCAPATMTLHTAAYIAEILRGAIQAIPPGEIEAARAL 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  K    ++LP+A R  +P  +++ + +LK SSLA  V   +L  +  TII +    
Sbjct: 133 GMSRPKTLLYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLELTGMARTIIARNYLT 192

Query: 364 IEIILIWMFIYLSLSIMI 381
           +E+       YL +S ++
Sbjct: 193 VEMFFTAGVFYLLISYLL 210


>gi|291486571|dbj|BAI87646.1| hypothetical protein BSNT_06059 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 224

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 15/190 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L         H+     L  LYIS F   G+PTLV + L   +++  P L  F  
Sbjct: 38  GLILALITKNKIPVLHQ-----LSKLYISFFR--GVPTLVQLFL---IYYGLPQL--FPE 85

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +   T      +  I LS   AA++AEI R+ L +V  GQ+EA +++G+T  +A R ++L
Sbjct: 86  MSKMTA---LTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+ IP   + ++ LLK +SLA  +G  ++ + G    +   +  E  L    +Y  
Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWI 202

Query: 377 LSIMIALFMN 386
           L+++ ++  +
Sbjct: 203 LTMIYSMLQD 212


>gi|152994193|ref|YP_001339028.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835117|gb|ABR69093.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 452

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 58/89 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+  +  A++AE +R GL A+P+GQ EAA  LGL +     L++LPQA+R +IP + + 
Sbjct: 324 VAVCLFAGAYMAENIRGGLQAIPKGQYEAAATLGLGYLHTMVLIILPQALRMMIPNIMTS 383

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK+++L   +G  D++ +   I N 
Sbjct: 384 FISLLKDTTLVSIIGLFDIMLMARNIAND 412


>gi|56695435|ref|YP_165783.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Ruegeria pomeroyi DSS-3]
 gi|56677172|gb|AAV93838.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Ruegeria pomeroyi DSS-3]
          Length = 437

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 3/99 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++  IP + S 
Sbjct: 308 IMVTLFAAAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPGIVST 367

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQAIEI 366
           ++ + K++ L   +G  D + +   I    N  G   EI
Sbjct: 368 FIGVFKDTVLVSIIGLLDPLGLSNAIRADANWNGIVWEI 406


>gi|330686403|gb|EGG98003.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 227

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 107/199 (53%), Gaps = 25/199 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + + +LG++L++   +   +       ++   ++ PLL     + F LP  +LI      
Sbjct: 29  ILATILGLILTIIRIKQVPYLSTCVRIYQSFMRSTPLLLQLFLVYFALPQFLLIFHININ 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           HFD+                    + +A S ++AA+++E+ R+G ++V   Q+EA +++G
Sbjct: 89  HFDR-----------------LFFIILAFSLHSAAYLSEVFRAGYLSVDYRQIEAGLSVG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTGQA 363
           L++ +  + +++PQA+R+ IP LT+Q + L+K++SLA  +G  D++     II N  G  
Sbjct: 132 LSYPRILKDIIIPQALRNSIPNLTTQIIELIKDTSLAFTIGIIDMMGQVQLIIGNNYGLG 191

Query: 364 -IEIILIWMFIYLSLSIMI 381
            +E+ ++   IY  L+++I
Sbjct: 192 MLEVYVVISIIYWLLALII 210


>gi|326794956|ref|YP_004312776.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326545720|gb|ADZ90940.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 456

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 58/89 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+  +  A++AE +R GL A+P+GQ EAA  LG  + +   L++LPQA+R +IP + + 
Sbjct: 328 VAVCLFAGAYMAENIRGGLQAIPKGQFEAATTLGFGYWQTMFLIVLPQALRMMIPNIMTS 387

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++LLK+++L   +G  D++ +   I N 
Sbjct: 388 FISLLKDTTLVSIIGLFDIMLMARNIAND 416


>gi|260596108|ref|YP_003208679.1| Inner membrane amino-acid ABC transporter permease yhdY
           [Cronobacter turicensis z3032]
 gi|260215285|emb|CBA27215.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Cronobacter turicensis z3032]
          Length = 365

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 239 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 298

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 299 KDTSLVIIIGLFDLFS 314


>gi|222082709|ref|YP_002542074.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727388|gb|ACM30477.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 220

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 13/175 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY++  +I  LP LVL+   Y   F  P   Q  F  G     +  S    LS Y+ A++
Sbjct: 59  LYVT--IIRNLPILVLVLFAY---FALP---QMGFRIG-----KVQSFIAVLSIYSGAYL 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+GL+++P+G  EA +A+GLT  +    ++ P   R+++P L+S  ++L K++SLA
Sbjct: 106 AEVFRAGLLSIPKGLSEAGLAIGLTPMQIRVSIIAPLMFRNVLPSLSSTVISLFKDTSLA 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+   +L      I  ++ + IE  L+   +Y+   +++A  M  +  ++A+  
Sbjct: 166 AAIAVPELTFEARKINVESFRVIETWLVTSGLYVFTCVVLAALMRVVERRLAVPR 220


>gi|239815856|ref|YP_002944766.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802433|gb|ACS19500.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 221

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 23/183 (12%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F+  + +A+P+L +  ++ F  P LV                      G T +P F +  
Sbjct: 57  FYIDSMRAIPVLVVLVWMYFAFPLLV----------------------GFTFAP-FWAAV 93

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ + AA+ AE++R+G+ ++  GQ  AA+ALG++  +  R VLLPQA   ++P   S 
Sbjct: 94  IALTLHIAAYAAEVIRAGIESIRPGQTRAALALGMSRAQLLRKVLLPQATIRMLPAFGSI 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
               +K++++A  +   +L+    T+  Q+ + +E+    M  Y ++   +   ++RL  
Sbjct: 154 LTIAIKDTAIATVIAVPELMHRAETVAGQSYRPVEVFTAVMVAYFAILFPVTRGIDRLYH 213

Query: 391 KIA 393
           ++A
Sbjct: 214 RVA 216


>gi|188533380|ref|YP_001907177.1| Putative ABC transporter, permease [Erwinia tasmaniensis Et1/99]
 gi|188028422|emb|CAO96283.1| Putative ABC transporter, permease [Erwinia tasmaniensis Et1/99]
          Length = 299

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 75/134 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +    L+   AA+ AEIVR G+  V  GQ EAA ALGL   + T  ++LPQA+R+II
Sbjct: 146 QFSTAVTGLTLVQAAYTAEIVRGGITGVDHGQFEAAAALGLPSSRRTLRIILPQALRAII 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      + N+T Q I ++++    YL ++ ++++ 
Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVV 265

Query: 385 MNRLNAKIALKEKK 398
            + +  ++A    +
Sbjct: 266 QHYVERRLARSSAR 279


>gi|50119206|ref|YP_048373.1| putative amino acid transport system permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49609732|emb|CAG73166.1| putative amino-acid transport system permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 221

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 22/203 (10%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+F   LGI+++L      R +  K  K L   Y+  ++I G P LV + L +       
Sbjct: 31  FIFGLALGILIALV-----RLYGPKPLKWLGDFYV--WVIRGTPLLVQLFLIF------- 76

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               +           F +  I  +    A+ +EIVR  +++VP+GQ  AA +LG+  R+
Sbjct: 77  ----YGLPSAGITLDAFPAALIGFTVSVGAYSSEIVRGAILSVPKGQWSAAYSLGMNGRQ 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+ PQ++   +PPL++ +++L+K++SLA  +   ++      I++ T + + + + 
Sbjct: 133 AIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSVTYEPLILYVE 192

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              IYL    M +  +++L AK+
Sbjct: 193 AALIYL----MFSTVLSQLQAKL 211


>gi|331015348|gb|EGH95404.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 247

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|170684312|ref|YP_001745540.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           SMS-3-5]
 gi|170522030|gb|ACB20208.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli SMS-3-5]
          Length = 367

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|325695481|gb|EGD37381.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 230

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 72/122 (59%), Gaps = 2/122 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA IAE+ ++  +AVP+GQ EA +++GL   +    ++LPQA R  +P LT+  LNL+++
Sbjct: 109 AAMIAEVFKAAYLAVPKGQTEAGLSIGLAPVQTFLRIVLPQAFRIALPNLTTALLNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +G  D++  G  +I  N    ++E       IY  ++++++L    L   + +K
Sbjct: 169 AALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSLASQLLEKSLIVK 228

Query: 396 EK 397
           E+
Sbjct: 229 ER 230


>gi|322420999|ref|YP_004200222.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320127386|gb|ADW14946.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 339

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 24/142 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP+L                       G T  P F +  + L   
Sbjct: 183 RGTPLLLQLFFIYYGLPSL-----------------------GVTFKP-FTAAILGLGLN 218

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++ EI+R G+ ++  GQMEAA A+G+T+ +A R V++PQ  + ++PP+ ++++ L+K
Sbjct: 219 YSAYLGEIIRGGIQSIEHGQMEAAKAIGMTYWQAMRRVIIPQTYKRLMPPIGNEFIALIK 278

Query: 337 NSSLAVAVGFADLVSVGGTIIN 358
           +++L   +   +L+     + N
Sbjct: 279 DTALVSTIAMVELMRSADQMFN 300


>gi|239978685|ref|ZP_04701209.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291450580|ref|ZP_06589970.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291353529|gb|EFE80431.1| ABC transporter permease [Streptomyces albus J1074]
          Length = 304

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RGL    LT+   A + V  FVLG +L++     +R       K++   YI  F     P
Sbjct: 82  RGLG---LTLWLTALVMVLGFVLGTLLAV-----ARMSANPVLKSVSWGYIWFFR--STP 131

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------------IALSCYTAAFI 281
            LV +   + +    P LG      G    PEF+++             I L+ + AA+ 
Sbjct: 132 VLVQLLFWFNIGALYPQLGL-----GIPFGPEFLTVRTVNLLGPLTVALIGLTLHEAAYA 186

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+VR GL++V RGQ EAA +LGL   +  R ++LPQAMR+I+PP  +  +  LK +S+ 
Sbjct: 187 AEVVRGGLLSVDRGQTEAAQSLGLGRWRRLRRIVLPQAMRAIVPPAGNMLIGTLKGTSIV 246

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILI 369
             +   DL+     + ++T Q I ++L+
Sbjct: 247 SVIAVQDLLYSVQLVYHRTYQVIPLLLV 274



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +D     A+L G   T WL    M+   ++GTL+   R+SAN ++  +   Y+  FR+ P
Sbjct: 72  ADYFTTPAVLRGLGLTLWLTALVMVLGFVLGTLLAVARMSANPVLKSVSWGYIWFFRSTP 131

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG-MFLNNR 174
            LV + F +   +  L  P   + +PFG  FL  R
Sbjct: 132 VLVQLLFWFN--IGAL-YPQLGLGIPFGPEFLTVR 163


>gi|188532409|ref|YP_001906206.1| Putative transport system permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188027451|emb|CAO95298.1| Putative transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 366

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 240 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 299

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 300 KDTSLVIIIGLFDLFS 315


>gi|315657127|ref|ZP_07910011.1| amino acid (glutamine) ABC superfamily ATP binding cassette
           transporter substrate binding protein [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315492230|gb|EFU81837.1| amino acid (glutamine) ABC superfamily ATP binding cassette
           transporter substrate binding protein [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 303

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 20/136 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P++  + F+ +GLP     AL++Q  +                    +S+++ +S  
Sbjct: 80  RGTPMILQAVFIYYGLPYFTNNALQFQSMWG-------------------VSIFV-VSIN 119

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+IAE VR G+I+V  GQ E A A+G+TH +    V+LPQA+R+++P + + ++  +K
Sbjct: 120 TGAYIAESVRGGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIK 179

Query: 337 NSSLAVAVGFADLVSV 352
           ++S+   +GF++  SV
Sbjct: 180 DTSVMFIIGFSEFFSV 195


>gi|304389822|ref|ZP_07371781.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304326998|gb|EFL94237.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 303

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 20/136 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P++  + F+ +GLP     AL++Q  +                    +S+++ +S  
Sbjct: 80  RGTPMILQAVFIYYGLPYFTNNALQFQSMWG-------------------VSIFV-VSIN 119

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+IAE VR G+I+V  GQ E A A+G+TH +    V+LPQA+R+++P + + ++  +K
Sbjct: 120 TGAYIAESVRGGIISVDPGQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIK 179

Query: 337 NSSLAVAVGFADLVSV 352
           ++S+   +GF++  SV
Sbjct: 180 DTSVMFIIGFSEFFSV 195


>gi|163744544|ref|ZP_02151904.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
 gi|161381362|gb|EDQ05771.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
          Length = 217

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 68/121 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+ AE  R+G+ A+ +GQ+EAA ++G+T R   R V+LPQA+R ++PP  + 
Sbjct: 93  IGLGLAYSAYQAENFRAGIEAIDKGQIEAAYSIGMTDRMIMRRVILPQAIRIVLPPFGNT 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK+SSL   +  A+L   G  I + T   I +  +   +YL +++ +      L  
Sbjct: 153 IIMLLKDSSLVSTITVAELTRQGQLIASSTFDNITVYTLVAIMYLGMALPLTYLTRNLEK 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|291529899|emb|CBK95484.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium siraeum 70/3]
          Length = 247

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 27/248 (10%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y+ +   L +    I+   G+ L N     PT+      KIF F+ +  I L L    L 
Sbjct: 4   YRKIKEELNMTGEQIMKVTGILLENL---IPTI------KIFGFTLLFSIPLGLIVAAL- 53

Query: 209 RHFHEKTGKALPLLYISTFLIF---GLP-TLVLIALKYQLHFDKPVL-GQFNFIGG--ST 261
                K  +  P+ +++   I    G P  L +I + Y L F K    G   F+    S 
Sbjct: 54  -----KMCRFKPISWLTNLYILIMRGTPLMLQIIVVYYALPFLKTATKGSGGFVESLLSG 108

Query: 262 VSPE-----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           V P      F  + IA     AA+ AEI R G+ ++PRGQ EAA ALG+T  +    ++L
Sbjct: 109 VDPAAESFMFTMVIIAFVLNYAAYFAEIFRGGIESIPRGQYEAAAALGMTKAQTFFRIIL 168

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ ++ I+P  +++ + L+K++SLA  V +++++      +      + + +  +F ++ 
Sbjct: 169 PQVIKRIVPASSNEVITLVKDTSLANVVAYSEIMLAAKQQMMNYSSLVPLFIAGVFYFVM 228

Query: 377 LSIMIALF 384
            +++ ALF
Sbjct: 229 ATVLTALF 236


>gi|330965185|gb|EGH65445.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 246

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|256392946|ref|YP_003114510.1| polar amino acid ABC transporter inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
 gi|256359172|gb|ACU72669.1| polar amino acid ABC transporter, inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
          Length = 352

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 15/155 (9%)

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           HFD+           + ++ E +   + LS   AA+ AE+VR+GL++V +GQ EAA +LG
Sbjct: 177 HFDE-----------NRLATELVVATVGLSLNEAAYAAEVVRAGLLSVDQGQHEAAASLG 225

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQT 360
           L      R ++LPQA+R+I+P   +Q + L+K +SL   V   DL     ++G T     
Sbjct: 226 LPRGYQFRRIVLPQALRAIVPAYVNQLIGLIKGTSLVFYVSLLDLFGQVQTMGSTYPADI 285

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              + +   W  I  S+   +  ++ R  ++ AL+
Sbjct: 286 VPLLLVATAWYVILTSVVSAVQFYVERRYSRGALR 320


>gi|218672038|ref|ZP_03521707.1| nopaline ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 242

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 2/156 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T+   G P LV + L Y      P++ Q +F+      P F   +IA +  +AA   E++
Sbjct: 50  TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVPRGQ+EAA ALGL+     RL++ P  +R  +P   ++ + +LK SSLA  + 
Sbjct: 108 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  +   ++++T    E+ +     YL L+++I
Sbjct: 168 LLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLI 203


>gi|213966879|ref|ZP_03395029.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301381562|ref|ZP_07229980.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302061682|ref|ZP_07253223.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302131521|ref|ZP_07257511.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213928201|gb|EEB61746.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 246

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|167900039|ref|ZP_02487440.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 7894]
          Length = 235

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 17/186 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F++G++  +F     R +       L  +YI   LI G P +V +     L+F  P+L 
Sbjct: 50  GFLVGMIAGMF-----RAYGPAVLNVLAQVYIE--LIRGTPIVVQVMF---LYFALPLLA 99

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                G S          +A++  + A++AE+VR  L+++P+G  EA +A+GL+  +   
Sbjct: 100 HVRIDGLSAA-------VVAITLNSGAYLAEVVRGALLSIPKGLTEAGLAMGLSMPRVLV 152

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ P A R +I PL +Q +  LK+ SL + +G  +L   G  II    QA+EI      
Sbjct: 153 KIVGPLAFRRLIAPLGNQCIVSLKDMSLFIVIGVGELTRKGQEIIAGNFQAVEIWTAVAA 212

Query: 373 IYLSLS 378
           IYL L+
Sbjct: 213 IYLVLT 218


>gi|330877714|gb|EGH11863.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 247

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPTGQYEASRALGMGYVRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|298486962|ref|ZP_07005015.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298158524|gb|EFH99591.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 246

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|293603168|ref|ZP_06685601.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292818399|gb|EFF77447.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 221

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 101/186 (54%), Gaps = 17/186 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+  +A   V S +LG+V++L      R +  +  +   + YI +  +  +P LV++  
Sbjct: 21  ITIALSAITAVSSILLGLVIALL-----RLYGPRWLRMALVFYIDS--MRAIPVLVVLVW 73

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F  P+L   NF      +P F +  +AL+ + AA+ AE++R+G+ +V  GQM A 
Sbjct: 74  IY---FAFPLLAGVNF------AP-FWAALVALTLHIAAYSAEVIRAGIESVRPGQMRAG 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +ALG++  +A R ++LPQA   ++P   S     +K++++A  +   +L+    TI  Q+
Sbjct: 124 LALGMSRAQALRKIILPQATIRMLPAFGSVLTVAIKDTAIATVIAVPELMHKAETIAGQS 183

Query: 361 GQAIEI 366
            + IE+
Sbjct: 184 YRPIEV 189


>gi|298529735|ref|ZP_07017138.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511171|gb|EFI35074.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 229

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 91/177 (51%), Gaps = 13/177 (7%)

Query: 222 LYISTFLIFGLPTLVLIAL------KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +Y  TF   G P LV I L      ++Q+  D   +G ++F      SP F S+ +AL+ 
Sbjct: 51  VYAFTFYFRGTPLLVQIFLIYYGSGQFQVFLDS--VGLWHFFK----SPWFCSV-LALTL 103

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            TAA+ AEI R G+  VPRG++EAA A G++     R +++P+A+R   P  T++ + LL
Sbjct: 104 NTAAYSAEIFRGGIQGVPRGEVEAARACGMSGLLLYRRIVIPKALRIAWPAYTNEVIFLL 163

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + SSL   +   D+  V   I  ++    E+ L    IYL L   I     R+  +I
Sbjct: 164 QASSLVSIITVMDITGVAREISARSFAFYELFLAAAAIYLVLVYGILWIFKRIENRI 220


>gi|283788087|ref|YP_003367952.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
 gi|282951541|emb|CBG91240.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
          Length = 368

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 242 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 301

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 302 KDTSLVIIIGLFDLFS 317


>gi|261821755|ref|YP_003259861.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261605768|gb|ACX88254.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 321

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 14/215 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS + G  L+L   RLS  +   T   L  LYI  F    L  +++I   +   +D+  
Sbjct: 90  VFSIIFGTALAL--ARLSPSYLLST---LSWLYIWLFRSLPLILVLIILYNFSYLYDELA 144

Query: 251 LG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           LG       F+   T+    +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALG
Sbjct: 145 LGVPFTSIIFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALG 204

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   + T  ++LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I
Sbjct: 205 LPGGRRTVRIILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVI 264

Query: 365 EIIL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +++   IW  +  ++  ++  ++ R  ++ A++E
Sbjct: 265 PLLMVATIWYLLITTVLSIVQYYVERYVSRGAVRE 299


>gi|218510923|ref|ZP_03508801.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 250

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 64/97 (65%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
              ++ + +   I ++ + +A++AE++R+GL ++P GQ EAA +LGL + +  +LV+LPQ
Sbjct: 110 ADALTDKLLRAQIGITLFVSAYLAEVIRAGLQSIPAGQTEAAYSLGLGYWRTVQLVVLPQ 169

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           A+R +IP + +  + +L N+SL   +G +DL++   T
Sbjct: 170 ALRIVIPAVVNLSIGILLNTSLLTVIGISDLLNGAKT 206


>gi|46199112|ref|YP_004779.1| amino acid ABC transporter, permease protein [Thermus thermophilus
           HB27]
 gi|55981139|ref|YP_144436.1| amino acid ABC transporter permease [Thermus thermophilus HB8]
 gi|46196736|gb|AAS81152.1| amino acid ABC transporter, permease protein [Thermus thermophilus
           HB27]
 gi|55772552|dbj|BAD70993.1| amino acid ABC transporter, permease protein [Thermus thermophilus
           HB8]
          Length = 261

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 10/187 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           +   K+ + S   G+V+ +FA   RLS     +   A    YI  ++I G P LV I   
Sbjct: 54  EVTLKLTLLSGAAGLVIGVFAGMARLSARAWVRLPAAF---YI--WVIRGTPLLVQILFA 108

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y             + G       + + +IAL+    A+ AE+VR+G+ A+P+GQ EAA 
Sbjct: 109 YNALPLLLQP---LWPGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQWEAAW 165

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG +     R V+LPQA+R ++PPL +  + LLK+SSLA  +   +L   G  II+ T 
Sbjct: 166 SLGFSAADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATF 225

Query: 362 QAIEIIL 368
           + +E+ L
Sbjct: 226 RPVEVYL 232


>gi|282890142|ref|ZP_06298673.1| hypothetical protein pah_c013o049 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499993|gb|EFB42281.1| hypothetical protein pah_c013o049 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 250

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 71/121 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++LS ++ A+IAE++R+G+ ++   Q+E+A A+ LT  +  R ++ PQA+   +PPL  Q
Sbjct: 125 LSLSLFSGAYIAEMIRAGIESISSTQLESARAICLTPFQTYRFIIFPQAVSQTLPPLAGQ 184

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +++K+SSL   +G  +L +    I + T   +E        YL L++ I+L   +L  
Sbjct: 185 FASIIKDSSLLSIIGINELTNTAQQINSATYSTLESFFPLALGYLVLTLPISLLSKKLEE 244

Query: 391 K 391
           +
Sbjct: 245 R 245


>gi|239821011|ref|YP_002948196.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805864|gb|ACS22930.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 252

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L       G  VS  F ++   L  Y  A+++E+VR
Sbjct: 69  YVVRGVPLLMVILWVY---FLVPILI------GRDVS-GFTTMLCTLVIYEGAYLSEVVR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ EAA ALG +H      V+LPQA+ +++P + SQ+++ +K ++L   +  
Sbjct: 119 AGIQALPKGQAEAARALGHSHLGTMWFVILPQALYNMLPSMLSQFISTIKETTLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            +L      I NQ
Sbjct: 179 QELTFAANQINNQ 191



 Score = 36.2 bits (82), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y +  L G V T  L+  G++ A  +  L+   RLS  +L+ W   V V V R +P L+
Sbjct: 19  QYPSGPLGGIVATLILSVLGIVLAFPLSVLLALARLSPWRLLRWPATVLVYVVRGVPLLM 78

Query: 144 VIFFLY 149
           VI ++Y
Sbjct: 79  VILWVY 84


>gi|330821002|ref|YP_004349864.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia gladioli BSR3]
 gi|327372997|gb|AEA64352.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia gladioli BSR3]
          Length = 601

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 11/142 (7%)

Query: 236 VLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           V IA+ +  H   D P  G         V+P FM+  I L+   AAF AE +R GL++V 
Sbjct: 147 VHIAVPFTGHVLLDAPTTG--------LVTP-FMAAAIGLTLSQAAFSAEAIRGGLLSVD 197

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA ALGL   +  R ++LPQAMRSI+P   +  + L K++S+   +   DL    
Sbjct: 198 HGQREAAAALGLPRGRQIRRIILPQAMRSILPAAFNDLVGLAKSTSVVYILAMPDLFYTV 257

Query: 354 GTIINQTGQAIEIILIWMFIYL 375
             I ++  + I ++++    YL
Sbjct: 258 QIIYHRNLEVIPLLMVATVWYL 279


>gi|325062522|gb|ADY66212.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 219

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL  +TAAF+AEI R  + A+ +GQ EA+ +L +   +  R V+LPQA++  
Sbjct: 84  PAWLAAGVALILWTAAFLAEIWRGCVEAIAKGQWEASASLAMGRLQQMRYVILPQALKIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           IPP     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L 
Sbjct: 144 IPPTVGFSVQVVKGTALTSIIGFVELSKAGTIVTNATFQPFTVYGLVALIYFALC 198


>gi|209546927|ref|YP_002278845.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538171|gb|ACI58105.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 225

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 79/140 (56%), Gaps = 8/140 (5%)

Query: 215 TGKALPLLYISTF--LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           + K LP   I+++  L  G P L+++   +      P L Q      +  SP F++ ++A
Sbjct: 47  SKKKLPRWSIASYIWLFRGAPALLILLFIWN---GLPQLSQV--FRAAWFSP-FVAAFLA 100

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+    A++ EI+RS   AV RGQ E A ALG    +   LV LPQAMR  +P L ++++
Sbjct: 101 LTLIEVAYLTEILRSAFAAVGRGQREGAEALGFHRWQIFFLVTLPQAMRIAVPALVNEFI 160

Query: 333 NLLKNSSLAVAVGFADLVSV 352
           +LLK++SLA  +   +L++V
Sbjct: 161 SLLKSTSLATVISLKELMTV 180


>gi|83035006|gb|ABB97482.1| GlnB [Halobacillus dabanensis]
          Length = 218

 Score = 71.2 bits (173), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 66/110 (60%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR  + ++ +GQ EA  ++GLT  +  R ++ PQA R +IPPL +Q++  LK++SL  
Sbjct: 107 EIVRGAVYSIDKGQEEAGRSIGLTRNQTMRYIIWPQAFRRMIPPLGNQFVISLKDTSLFS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   +L+ +G      T QA + + +   +YL +++  A+++ R+  ++
Sbjct: 167 VIAVGELLYMGQQYYGMTFQAFQALTMVCVMYLIITVPTAIYLRRVERRL 216



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  + F G+I   ++G + G  RLS NKL+  I  VYVE  R  P L  I F+
Sbjct: 16  LLEGLVWTLLITFVGLIIGFVLGAIFGFARLSKNKLIYGIATVYVEAVRGTPILAQILFI 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|323165238|gb|EFZ51028.1| general L-amino acid transport system permease aapM domain protein
           [Shigella sonnei 53G]
          Length = 168

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 42  FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 101

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 102 KDTSLVIIIGLFDLFS 117


>gi|310768127|gb|ADP13077.1| putative ABC transport system, inner membrane component [Erwinia
           sp. Ejp617]
          Length = 299

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 74/129 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+   AA+ AEIVR G+  V  GQ EAA ALGL   + T  ++LPQA+R+II
Sbjct: 146 QFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIILPQALRAII 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      + N+T Q I ++++    YL ++ ++++ 
Sbjct: 206 PGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVV 265

Query: 385 MNRLNAKIA 393
            + +   +A
Sbjct: 266 QHYVERWLA 274


>gi|163735166|ref|ZP_02142602.1| ABC transporter permease protein [Roseobacter litoralis Och 149]
 gi|161391624|gb|EDQ15957.1| ABC transporter permease protein [Roseobacter litoralis Och 149]
          Length = 221

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 13/163 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +IFV   V G+ L L A  L+R+   +  +     +I  F     P LV I   +  +F 
Sbjct: 26  RIFVICLVAGLSLGL-AMGLARYSVRRWLRWPAACFIEFFR--NTPVLVQI---FWFYFA 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+L  F            M+  + ++  +AAF AEI R G+  +  GQ EA  A+G+ +
Sbjct: 80  FPILAPFEI-------SALMAAALGITLNSAAFSAEIFRGGIQTIDPGQWEAGRAIGMRY 132

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           R+    ++LPQA+R ++P LT++ + + K ++LA A+ +AD++
Sbjct: 133 REIMARIILPQAVRRMMPALTNRGIEIFKMTTLASAIAYADVL 175



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 79  YTSD----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           YT D      Y  A+ VG +NT  +    ++    +G  +G  R S  + + W    ++E
Sbjct: 3   YTWDFGSVWEYREALWVGLINTLRIFVICLVAGLSLGLAMGLARYSVRRWLRWPAACFIE 62

Query: 135 VFRNIPPLVVIFFLY 149
            FRN P LV IF+ Y
Sbjct: 63  FFRNTPVLVQIFWFY 77


>gi|313623357|gb|EFR93582.1| probable amino-acid ABC transporter permease protein YckA [Listeria
           innocua FSL J1-023]
          Length = 213

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 64/102 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLV 187


>gi|172057718|ref|YP_001814178.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
 gi|171990239|gb|ACB61161.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
          Length = 214

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 3/106 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI+R+G+ ++ +GQ EAA +LG+T R+    ++LPQA R ++P +T+Q +  LK+
Sbjct: 97  GAYFAEIIRAGIQSIDKGQTEAARSLGMTGRQTMTQIVLPQAFRRMLPTITNQSIISLKD 156

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +SL   +G ADL   G     Q     E  ++W  + L   ++I L
Sbjct: 157 TSLLSIIGIADLTQQGQV---QQATTFEPFIVWTVVGLMYFVVIYL 199


>gi|126654465|ref|ZP_01726197.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905]
 gi|126589071|gb|EAZ83288.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905]
          Length = 218

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 20/179 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL     + FGLP L             PV+G++       V   F++  +     
Sbjct: 60  RGTPLLLQLLLICFGLPML-------------PVIGEY------LVLDRFVAACLGFILN 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+ +GQ EAA  LGL+  + T  V+LPQ  R  +P L+++ + L+K
Sbjct: 101 YAAYFAEIFRGGLLAIDKGQYEAAQVLGLSKWQTTTRVILPQMFRVALPALSNESVTLIK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++L  AV   +L+    T +N+    +    I   IYL +++++ +F   L  +   +
Sbjct: 161 DTALLYAVAVPELLHFAQTAVNRDFTIVP-FFIAGAIYLIMTLILTVFFKWLEKRFKFE 218


>gi|111023726|ref|YP_706698.1| glutamate transport system permease protein GluC [Rhodococcus
           jostii RHA1]
 gi|110823256|gb|ABG98540.1| glutamate transport system permease protein GluC [Rhodococcus
           jostii RHA1]
          Length = 226

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 52/78 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS YTAAF+ E +RSG+  V  GQ EA  +LGLT  +  RL++LPQA R++  PL S 
Sbjct: 101 LGLSVYTAAFVCESLRSGINTVHVGQAEAGRSLGLTFSQNLRLIVLPQAFRAVTAPLGSV 160

Query: 331 YLNLLKNSSLAVAVGFAD 348
            + L KN+++A  +G A+
Sbjct: 161 LIALTKNTTIASVIGVAE 178


>gi|330970135|gb|EGH70201.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aceris str. M302273PT]
          Length = 246

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|296533473|ref|ZP_06896052.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296266199|gb|EFH12245.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 226

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 11/120 (9%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LV+I L   L F  P +G    +G S     F + +++L+    AF  EI  +G+ A
Sbjct: 74  LPPLVIIVL---LFFGLPAMG----LGLS----GFAATWLSLTLVLMAFSEEIYWAGITA 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQ EAA + GL+     RLV+LPQA+R  IPPLT++ + + K ++L   VG ++++ 
Sbjct: 123 VPKGQWEAARSTGLSFLATLRLVVLPQALRITIPPLTNRTIAITKGTALGSVVGVSEILG 182


>gi|190894163|ref|YP_001984457.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190699824|gb|ACE93907.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 249

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 2/156 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T+   G P LV + L Y      P++ Q +F+      P F   +IA +  +AA   E++
Sbjct: 57  TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVPRGQ+EAA ALGL+     RL++ P  +R  +P   ++ + +LK SSLA  + 
Sbjct: 115 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 174

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  +   ++++T    E+ +     YL L+++I
Sbjct: 175 LLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLI 210


>gi|317403436|gb|EFV83948.1| hypothetical protein HMPREF0005_01969 [Achromobacter xylosoxidans
           C54]
          Length = 217

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 18/206 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V S +LG+V +L     +++    +   + LL        G+P +VL+   + ++F  P
Sbjct: 30  LVLSTLLGLVWALMRVSGNKYLSRFSAGVINLLR-------GIPIIVLL---FYIYFVMP 79

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G    I  + V    + L IA S Y A    E  R+G+ A+ RGQ+EAA+A+G++   
Sbjct: 80  DMG----IALTAVQAAIIGLGIAYSAYQA----ENFRAGIEAIDRGQIEAAMAMGMSWSM 131

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA++ ++PP  +  + +LK+SS A  +  A+L   G  I   T +   +  +
Sbjct: 132 TMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKLIAVSTFKNATVFSL 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
              +YL + + + L +  L  + A K
Sbjct: 192 VALMYLVMCVPLILLVRHLEKRSAAK 217


>gi|313890158|ref|ZP_07823793.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121519|gb|EFR44623.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 213

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 55/91 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L H +  R ++LPQ  + ++P + ++
Sbjct: 89  LAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKVLRLNHLQTIRYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|311032512|ref|ZP_07710602.1| amino acid ABC transporter (permease) [Bacillus sp. m3-13]
          Length = 233

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 7/114 (6%)

Query: 249 PVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           P+L Q  FI       G T+   F +  IA S    A+ +EI+R+ +++ P+GQ EAA +
Sbjct: 79  PLLVQLFFIFYGLPSIGVTID-SFPAAVIAFSLNVGAYASEIIRAAILSTPKGQWEAAYS 137

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +G+++ +A R ++LPQA R  IPPL++ +++L+K++SLA  +   ++  V   I
Sbjct: 138 MGMSYPQALRRIILPQAARVSIPPLSNSFISLVKDTSLASLILVTEMFRVAQQI 191


>gi|16800918|ref|NP_471186.1| hypothetical protein lin1851 [Listeria innocua Clip11262]
 gi|16414353|emb|CAC97082.1| lin1851 [Listeria innocua Clip11262]
          Length = 213

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 64/102 (62%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++IA     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P +
Sbjct: 86  AVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAI 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            ++ +NL+K+SSL   +G  DL+  G   +++    I ++L+
Sbjct: 146 GNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLV 187


>gi|84385570|ref|ZP_00988601.1| arginine ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84379550|gb|EAP96402.1| arginine ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 228

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 1/134 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV +GQ EAA ALG++  ++   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGISQLRSFFRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLIT 205

Query: 382 ALFMNRLNAKIALK 395
              +  ++ K +++
Sbjct: 206 QRLVKVIDGKFSIQ 219


>gi|261379484|ref|ZP_05984057.1| amino acid ABC transporter, permease protein [Neisseria subflava
           NJ9703]
 gi|319638914|ref|ZP_07993672.1| ABC transporter [Neisseria mucosa C102]
 gi|284797944|gb|EFC53291.1| amino acid ABC transporter, permease protein [Neisseria subflava
           NJ9703]
 gi|317399818|gb|EFV80481.1| ABC transporter [Neisseria mucosa C102]
          Length = 219

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 20/183 (10%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE +R+G++AVP+GQ+EA  A+GL+  +  R V LPQA    +P + +  
Sbjct: 92  ALVFLGASYMAEAIRAGILAVPKGQIEAGKAIGLSRFQVFRYVELPQAWAVAVPAIGANV 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMIALFMNR 387
           L L+K +S+  AVG A+L+ V   II    +  E + +    ++ I L +S++     NR
Sbjct: 152 LFLMKETSIVSAVGIAELLFVTKDIIGMDYKTNEALFLLFASYLIILLPVSLLARWAENR 211

Query: 388 LNA 390
           + +
Sbjct: 212 VRS 214


>gi|46202162|ref|ZP_00208411.1| COG0765: ABC-type amino acid transport system, permease component
           [Magnetospirillum magnetotacticum MS-1]
          Length = 219

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  + + AAF AEI+R+G+ +VP+GQ  AA ALGL   +    V+LPQA R++ P L
Sbjct: 93  SALITFTVFEAAFYAEIMRAGINSVPKGQTWAAQALGLNRVQTMTSVVLPQAFRAMTPLL 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L ++SSL  A+G  DL+           + +E+ L    +Y ++   ++  + R
Sbjct: 153 LTQTIVLFQDSSLVYAIGAKDLLKAAEIAGKNYNRPVEMYLFAAGLYFAICFSLSQVVKR 212

Query: 388 L 388
           L
Sbjct: 213 L 213


>gi|330988844|gb|EGH86947.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331008159|gb|EGH88216.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 324

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 18/212 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 96  VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 148

Query: 249 PVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +LG       F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 149 ILLGVPFTDLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 209 LGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 268

Query: 363 AIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
            I +++   +W  I  +L      ++ R  A+
Sbjct: 269 VIPLLIVATVWYLIITTLLTSAQYYVERHFAR 300


>gi|327194766|gb|EGE61608.1| nopaline ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 247

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 2/156 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T+   G P LV + L Y      P++ Q +F+      P F   +IA +  +AA   E++
Sbjct: 55  TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 112

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVPRGQ+EAA ALGL+     RL++ P  +R  +P   ++ + +LK SSLA  + 
Sbjct: 113 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 172

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  +   ++++T    E+ +     YL L+++I
Sbjct: 173 LLEVTGLARQLVSETFAPYEVFIAAGAFYLLLTLLI 208


>gi|268590212|ref|ZP_06124433.1| arginine ABC transporter, permease protein ArtQ [Providencia
           rettgeri DSM 1131]
 gi|291314493|gb|EFE54946.1| arginine ABC transporter, permease protein ArtQ [Providencia
           rettgeri DSM 1131]
          Length = 246

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 25/197 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIAL------------KYQLHFDKPVL----GQFNFIGGS 260
           + LP L +  F+ FG  TL LI L            +  +  D  +     G+F++    
Sbjct: 55  RGLPELLVVLFVYFG--TLQLINLFGDGFDINLGFWQTTIQIDPSIFFANSGEFDY---- 108

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
             +P F+   IAL+   A++ ++ +R  L AVP GQ EA  ALGL  R      ++PQ  
Sbjct: 109 --TP-FVCGVIALALLYASYASQTLRGALKAVPYGQWEAGFALGLNKRTIFFRFIMPQMW 165

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L +Q+L LLK+++L   +   DL+    TI+N+T +      I   IYL+++++
Sbjct: 166 RHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKTIVNRTHEPFTWYAIVGLIYLAITLV 225

Query: 381 IALFMNRLNAKIALKEK 397
             + + R+  +    E+
Sbjct: 226 SQVILKRIELRTTRFER 242


>gi|116496232|ref|YP_807966.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei ATCC 334]
 gi|116106382|gb|ABJ71524.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
          Length = 482

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 26/204 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  V+G +L+L   +LS   H    KA+  +YI    I G P LV     + + F   +L
Sbjct: 299 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 348

Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G     F+ G+          IA++  + A++AEI+R G+ +VP GQ EAA +LGL   +
Sbjct: 349 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 398

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365
           A R V+LPQA ++I P L ++++  +K SS+   +G  +L+  G  +   + +     + 
Sbjct: 399 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 458

Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389
           + +++  +  +LS ++ L   R N
Sbjct: 459 VAILYFIMTFTLSRLLRLIEKRFN 482


>gi|91225768|ref|ZP_01260797.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91189657|gb|EAS75932.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 229

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 8/137 (5%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV RGQ EAA ALG++   A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQAHAFVRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T  AI     W     ++ + I
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQA----QLTSAAIHEAFTWYATAAAIYLGI 201

Query: 382 ALFMNRLNAKIALKEKK 398
            L   R    + L +KK
Sbjct: 202 TLITQR---AVKLIDKK 215


>gi|304396808|ref|ZP_07378688.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355604|gb|EFM19971.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 222

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 18/211 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   + S + GI++++   R + HF  K      LL + + L   LP LV+I   
Sbjct: 21  TLQLCAVAALCSLLWGIIMAIGMLR-APHFWRK------LLRLYSALTQALPLLVVI--- 70

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L+F   VL  +N    +  SP+  +  +AL+ Y A ++A+++RS +  +PRGQ EA  
Sbjct: 71  YLLYF---VLPDYNI---TLSSPQ--AGVLALTLYYAPYVAQVIRSAIETLPRGQWEACR 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            LGL+  +  R V LPQ +  ++ PL    + L+K+S+L   V   + +      I++T 
Sbjct: 123 VLGLSRMEQLRDVALPQTLPQMLSPLVGLLIGLIKDSALLSIVSVQEFMYAAKEAISETY 182

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +EI L     Y +L+ ++     R+  ++
Sbjct: 183 APLEIYLTVALSYWALNSLLDGLTRRIEFRM 213


>gi|302023472|ref|ZP_07248683.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05HAS68]
          Length = 165

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 58/79 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + A+++E  R+G+ AVP+GQ+EAA +LG+  ++A R V++PQA+ +I+P L ++
Sbjct: 36  IVISMNSGAYVSETDRAGINAVPKGQLEAANSLGIRPKQAMRYVIMPQAITNILPALGNE 95

Query: 331 YLNLLKNSSLAVAVGFADL 349
           ++ ++K+SSL   +G  +L
Sbjct: 96  FVTIVKDSSLLSTIGVMEL 114


>gi|13473259|ref|NP_104826.1| glutamine ABC transporter (integral membrane protein)
           [Mesorhizobium loti MAFF303099]
 gi|14024007|dbj|BAB50612.1| glutamine ABC transporter (integral membrane protein)
           [Mesorhizobium loti MAFF303099]
          Length = 221

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 32/204 (15%)

Query: 195 VLGIVLSLF---ATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V+G+VL+++   A R+ R     + +  + +PL+ +   + +G+PT+V       L +  
Sbjct: 37  VIGLVLAVWYVSAGRVVRAIIAAYVEFIRNVPLILLVYLVFYGVPTVV------DLAYSA 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P                  S  + LS Y+ A++ E+ RSGL AVPRGQ++A  A+GLT  
Sbjct: 91  PT-----------------SFVLTLSVYSGAYLVEVFRSGLEAVPRGQLDAGKAIGLTPW 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIEII 367
           +    V LP  +R  +P L++ +++L K++S+A  +   +L + G   IN  T + +E+ 
Sbjct: 134 QRLIHVRLPTMLRITLPALSNTFISLFKDTSIASVISVPEL-TFGAQWINFNTFRIVEVY 192

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           L+   +YL L+  I LF  RL  +
Sbjct: 193 LVTTAMYL-LTGYILLFGLRLVER 215


>gi|15596087|ref|NP_249581.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PAO1]
 gi|107100348|ref|ZP_01364266.1| hypothetical protein PaerPA_01001373 [Pseudomonas aeruginosa PACS2]
 gi|116048814|ref|YP_792386.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218893141|ref|YP_002442010.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           LESB58]
 gi|254239243|ref|ZP_04932566.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           C3719]
 gi|254245177|ref|ZP_04938499.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           2192]
 gi|296390756|ref|ZP_06880231.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PAb1]
 gi|313105773|ref|ZP_07792036.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           39016]
 gi|9946790|gb|AAG04279.1|AE004523_7 arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PAO1]
 gi|2668597|gb|AAC71072.1| membrane protein [Pseudomonas aeruginosa PAO1]
 gi|115584035|gb|ABJ10050.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126171174|gb|EAZ56685.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           C3719]
 gi|126198555|gb|EAZ62618.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           2192]
 gi|218773369|emb|CAW29181.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           LESB58]
 gi|310878538|gb|EFQ37132.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           39016]
          Length = 232

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEILAGSLKATPHGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+ +Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLVDITGAARTVYSQYYLPFEAFITAGLFYLCLTFILVRLF 216


>gi|260583731|ref|ZP_05851479.1| polar amino acid uptake (PAAT) family ABC transporter permease
           [Granulicatella elegans ATCC 700633]
 gi|260158357|gb|EEW93425.1| polar amino acid uptake (PAAT) family ABC transporter permease
           [Granulicatella elegans ATCC 700633]
          Length = 216

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 34/191 (17%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F+F  +LG +  L         R+  +FH    +  P L     L FGLP      LK Q
Sbjct: 29  FIFGTILGFMFVLMKRSNIRVLRMIANFHVSFMRGTPTLVFLFLLYFGLPY-----LKIQ 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L                   P  +   +  S  ++A+I E++RS + AV  GQ EA+ +L
Sbjct: 84  L-------------------PALVCAILCFSIASSAYICEVLRSSIDAVDYGQWEASTSL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTIINQ 359
           GL + +  R V++PQA R  +PPL++  L+++K +SLA  +   D+      VGG   + 
Sbjct: 125 GLNYFQTLRRVIVPQAFRISVPPLSNVLLDMIKGTSLAAMITVPDIFQNAKIVGGREFDY 184

Query: 360 TGQAIEIILIW 370
               I + LI+
Sbjct: 185 MTMYILVALIY 195


>gi|300784267|ref|YP_003764558.1| amino acid ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299793781|gb|ADJ44156.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 286

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 32/155 (20%)

Query: 204 ATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           A RLS H        F  +  +A+P L +     FGLPT+                    
Sbjct: 89  AGRLSDHAWVRGIAGFVVEFFRAIPALILMFVFYFGLPTV-------------------- 128

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G   SP F+ +   L+ Y  + +AE+ R+G+ ++P+GQ EAA ALG+   +   LVL
Sbjct: 129 ---GVPTSP-FLGVVFGLTLYNGSVLAEVFRAGIQSLPKGQSEAAYALGMRKTQVMFLVL 184

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           LPQA+R+++P + SQ + LLK+++L   + + +L+
Sbjct: 185 LPQAVRAMLPTIISQLVVLLKDTALGFIITYQELL 219


>gi|296158407|ref|ZP_06841238.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891351|gb|EFG71138.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 265

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 22/205 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKPVL 251
           V+G+VL L               ALPL  ++   I+   G P LV + L Y   F  P L
Sbjct: 45  VIGVVLGLSGMH----------HALPLRVLNQGYIWFFRGTPVLVQLVLIY---FGLPYL 91

Query: 252 GQFNF------IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             F+       +G   +S   ++  IA   + AA+++EI R+ + ++  GQMEAA+A+G+
Sbjct: 92  VGFDLFPAVMSLGPLHLSGALVAGVIAFGLHEAAYMSEITRASVGSINPGQMEAALAVGM 151

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T   A R ++LPQA+  I+P L +Q+ N+LK ++L   +G +++  V   +   T    E
Sbjct: 152 TPAMAMRRIVLPQAVPLIVPALGNQFNNMLKTTALLSVIGVSEMFRVAEQMQAATFMTFE 211

Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390
           + L     YL L+ +     + L A
Sbjct: 212 VYLGVSVYYLMLTGVWTFIQHGLEA 236


>gi|283833087|ref|ZP_06352828.1| amino acid ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
 gi|291070707|gb|EFE08816.1| amino acid ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
          Length = 308

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 77/134 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL ++ +++L 
Sbjct: 206 PAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITSVLSLI 265

Query: 385 MNRLNAKIALKEKK 398
            + +   +A  E++
Sbjct: 266 QHIVERALARSERR 279


>gi|238928188|ref|ZP_04659948.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas flueggei ATCC 43531]
 gi|304437587|ref|ZP_07397542.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|238884148|gb|EEQ47786.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas flueggei ATCC 43531]
 gi|304369400|gb|EFM23070.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 254

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 6/124 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+I+E+ R+   AVPRGQ EAA++ GL+  +A   V+L QA    +P   +  +NLLK 
Sbjct: 111 GAYISEVFRAAYTAVPRGQYEAAVSAGLSPWQAFCHVMLGQAALIALPNFGNSTINLLKE 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMI----ALFMNRLNAK 391
           +SLA  +G  DL+  G  II Q   A  +E+ L  M IY  L ++I    A   +RL+  
Sbjct: 171 ASLAYTIGLIDLIGRGSLIIAQNYGAYGVEVYLSAMLIYWVLVLLIEQGFAWAEHRLDQG 230

Query: 392 IALK 395
             L+
Sbjct: 231 TGLR 234


>gi|301067834|ref|YP_003789857.1| amino acid ABC transporter permease/periplasmic protein
           [Lactobacillus casei str. Zhang]
 gi|300440241|gb|ADK20007.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei str. Zhang]
          Length = 482

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 26/204 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  V+G +L+L   +LS   H    KA+  +YI    I G P LV     + + F   +L
Sbjct: 299 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 348

Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G     F+ G+          IA++  + A++AEI+R G+ +VP GQ EAA +LGL   +
Sbjct: 349 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 398

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365
           A R V+LPQA ++I P L ++++  +K SS+   +G  +L+  G  +   + +     + 
Sbjct: 399 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 458

Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389
           + +++  +  +LS ++ L   R N
Sbjct: 459 VAILYFIMTFTLSRLLRLIEKRFN 482


>gi|221069034|ref|ZP_03545139.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|264676835|ref|YP_003276741.1| glutamine-binding periplasmic protein [Comamonas testosteroni
           CNB-2]
 gi|299529655|ref|ZP_07043092.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44]
 gi|220714057|gb|EED69425.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|262207347|gb|ACY31445.1| glutamine-binding periplasmic protein [Comamonas testosteroni
           CNB-2]
 gi|298722518|gb|EFI63438.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44]
          Length = 217

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 60/96 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ E A  LG+T+ +  R ++LPQ    I
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEGAKVLGMTYAQTMRRIVLPQMWARI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +PP++++ + L+K++SL   +   DL+ V   ++ +
Sbjct: 145 LPPVSNETITLVKDTSLIYVLALNDLLRVARGVVQR 180


>gi|239637861|ref|ZP_04678822.1| glutamine-binding periplasmic protein [Staphylococcus warneri
           L37603]
 gi|239596424|gb|EEQ78960.1| glutamine-binding periplasmic protein [Staphylococcus warneri
           L37603]
          Length = 486

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 59/80 (73%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI R+G+ ++ +GQ EAA +LGL++ +  + V++PQA+++I+P L ++
Sbjct: 361 IALVINSSAYIAEIFRAGINSIDKGQTEAARSLGLSYNQTMKSVVMPQAIKNILPALGNE 420

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K SS+   +G  +++
Sbjct: 421 FVTLIKESSIVSTIGVGEIM 440



 Score = 45.1 bits (105), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 6/110 (5%)

Query: 40  IFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWL 99
           I L  +N   N +   NL   I     +A  ++      YT    Y +  + G  NT  +
Sbjct: 239 ILLKKLNQTSNEVNDKNL---IDHYMTKAANDMQDDGNFYTK---YKSFFIKGLQNTILI 292

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +F G++   I+G  +   +LS  K ++WI  +Y+E  R  P LV +F ++
Sbjct: 293 SFVGVVFGAILGAFIALMKLSKFKPLSWIASIYIEFLRGTPLLVQVFIVF 342


>gi|239630683|ref|ZP_04673714.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526966|gb|EEQ65967.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 485

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 26/204 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  V+G +L+L   +LS   H    KA+  +YI    I G P LV     + + F   +L
Sbjct: 302 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 351

Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G     F+ G+          IA++  + A++AEI+R G+ +VP GQ EAA +LGL   +
Sbjct: 352 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 401

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365
           A R V+LPQA ++I P L ++++  +K SS+   +G  +L+  G  +   + +     + 
Sbjct: 402 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 461

Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389
           + +++  +  +LS ++ L   R N
Sbjct: 462 VAILYFIMTFTLSRLLRLIEKRFN 485


>gi|227532776|ref|ZP_03962825.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189610|gb|EEI69677.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 482

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 26/204 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  V+G +L+L   +LS   H    KA+  +YI    I G P LV     + + F   +L
Sbjct: 299 FGTVIGTLLALM--KLS---HSWFAKAIANVYIE--FIRGTPLLVQ---AFIVFFGTQIL 348

Query: 252 GQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G     F+ G+          IA++  + A++AEI+R G+ +VP GQ EAA +LGL   +
Sbjct: 349 GLDLSAFVAGA----------IAMAINSGAYVAEIIRGGINSVPIGQTEAARSLGLHQGQ 398

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IE 365
           A R V+LPQA ++I P L ++++  +K SS+   +G  +L+  G  +   + +     + 
Sbjct: 399 AMRYVILPQATKNIWPALGNEFVTDIKESSVLSVIGATELMFEGTVVQGASFKPFLPLVV 458

Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389
           + +++  +  +LS ++ L   R N
Sbjct: 459 VAILYFIMTFTLSRLLRLIEKRFN 482


>gi|169830102|ref|YP_001700260.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168994590|gb|ACA42130.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 253

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 2/106 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA ++E++RS  +A+P+GQ EAA+++GLT  +A R ++ PQA+   +P   +  + LL+ 
Sbjct: 127 AAIMSEVMRSAYLAIPKGQFEAAVSVGLTPIQAYRRIIFPQALVVALPNFGNGMIALLQE 186

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMI 381
            +LA  +G  D+V     II  N    A+EI +    IY  LSI+I
Sbjct: 187 GALAYTIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIII 232


>gi|309807768|ref|ZP_07701702.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308169028|gb|EFO71112.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
          Length = 179

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 75/123 (60%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+   + A++AE +RSG+ ++P GQ EAA +LGL+     R V++PQA+++I P L ++
Sbjct: 54  IAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYVVIPQAIKNIWPALGNE 113

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIMIALFMN 386
           ++ LLK+SSL   +G A+ +     +   T Q +  +++ M IY     +L+ +++    
Sbjct: 114 FITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIYFIMTFTLTRILSYMER 173

Query: 387 RLN 389
           R+N
Sbjct: 174 RMN 176


>gi|296840926|ref|ZP_06863806.2| L-cystine ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
 gi|296839593|gb|EFH23531.1| L-cystine ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
          Length = 227

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E + + +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETICAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   RL  
Sbjct: 160 FIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEK 219

Query: 391 K 391
           +
Sbjct: 220 R 220


>gi|283477848|emb|CAY73764.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 295

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 74/129 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+   AA+ AEIVR G+  V  GQ EAA ALGL   + T  ++LPQA+R+II
Sbjct: 142 QFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIILPQALRAII 201

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      + N+T Q I ++++    YL ++ ++++ 
Sbjct: 202 PGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVV 261

Query: 385 MNRLNAKIA 393
            + +   +A
Sbjct: 262 QHYVERWLA 270


>gi|253690351|ref|YP_003019541.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756929|gb|ACT15005.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 369

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 60/95 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ + A + AE++R GL +VPRGQ EAA+AL L +   T  ++LPQA+R  +
Sbjct: 228 KLLRIIIGIALFFACYQAEVIRGGLQSVPRGQYEAAMALNLGYWHTTTKIVLPQALRICL 287

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           P +T+  +  +KN+S  + +G  D+++   +++  
Sbjct: 288 PAMTNHIIAAMKNTSFVIIIGLFDILTATSSVMQD 322


>gi|261417154|ref|YP_003250837.1| polar amino acid ABC transporter, inner membrane subunit
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261373610|gb|ACX76355.1| polar amino acid ABC transporter, inner membrane subunit
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|302325679|gb|ADL24880.1| putative amino acid ABC transporter, permease/amino acid-binding
           protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 498

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 4/122 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    + A+++EI+RSG+  V  GQ+EA  +LGL  R     ++ PQA ++ +P LT++
Sbjct: 372 VAFGINSGAYVSEIIRSGIKGVDPGQIEAGRSLGLKFRTVLYYIVYPQAFKNSLPALTNE 431

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILIWMFIYLSLSIMIALFMN 386
           +++L+K +S+   +G  DL   G  I + T +A    + +  I+  I   LS  +A    
Sbjct: 432 FISLIKETSICGYIGLTDLTRGGDIIRSMTYEAMLPLLAVAAIYFIIVAGLSACVAKLEK 491

Query: 387 RL 388
           RL
Sbjct: 492 RL 493


>gi|170692241|ref|ZP_02883404.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170142671|gb|EDT10836.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 219

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 104/207 (50%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  + G VL+L         H +T   L  +Y+S  ++ G P LV I   + +++  P  
Sbjct: 31  FGLIAGAVLALMGVS-----HSRTLNRLARVYVS--VMRGTPLLVQI---FVIYYGLP-- 78

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             FN     ++ P    + IALS   AA+++E +R  ++ + +GQ  AA +LGL+ R+  
Sbjct: 79  -SFNI----SLDPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQTL 132

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T Q + + L   
Sbjct: 133 RYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIASTYQPLPLYLAAA 192

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            +Y  L  ++ L       ++AL  + 
Sbjct: 193 AVYWVLCQILELLQRWYERRLALPSRH 219


>gi|327395463|dbj|BAK12885.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Pantoea ananatis AJ13355]
          Length = 366

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 220 FMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQMLVI 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++  IP L +  + L K++SL + +G  DL S
Sbjct: 280 LPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFS 315


>gi|307725562|ref|YP_003908775.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307586087|gb|ADN59484.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 265

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 60/87 (68%), Gaps = 4/87 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  ++A+IAEI RSG+ +V RGQM A  ALG+T+    R V++PQ +R I+P L +Q
Sbjct: 103 VALALVSSAYIAEIFRSGIQSVGRGQMSACQALGMTYWSGMRHVIVPQGVRRILPALANQ 162

Query: 331 YLNLLKNSSLAVAVGF----ADLVSVG 353
           +++++K+SSL   +G      DL ++G
Sbjct: 163 FISIVKDSSLVYFLGLLTSQRDLFTIG 189


>gi|228477639|ref|ZP_04062268.1| ABC-type amino acid transport permease component [Streptococcus
           salivarius SK126]
 gi|228250528|gb|EEK09739.1| ABC-type amino acid transport permease component [Streptococcus
           salivarius SK126]
          Length = 230

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 84/151 (55%), Gaps = 17/151 (11%)

Query: 264 PEFMSLYIALSCYT---------------AAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PEF++ ++ L                   +A I+E+ ++   A+P+GQ+EA +++GLT  
Sbjct: 80  PEFLNWWLGLDINDWSKLIFVLVTMVLLFSAMISEVFKAAYQAIPKGQLEAGLSIGLTSE 139

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEI 366
           +    ++ PQA +  +P +T+  LNL+++++LA  +GF D++  G  +I++     ++E 
Sbjct: 140 QTFVRIIAPQAFKVALPNITTAILNLMRDAALAYTIGFIDVMGKGNLLISRHLGNYSLET 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                F+Y  ++++++L       ++++KE+
Sbjct: 200 YTAVAFVYWGIALILSLISRIAEQQLSVKER 230


>gi|328956326|ref|YP_004373659.1| L-aspartate ABC transporter membrane protein; L-glutamate ABC
           transporter membrane protein [Coriobacterium glomerans
           PW2]
 gi|328456650|gb|AEB07844.1| L-aspartate ABC transporter membrane protein;L-glutamate ABC
           transporter membrane protein [Coriobacterium glomerans
           PW2]
          Length = 215

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A + +T+A +AEIVR GL ++P  Q EAA + G       RL++LPQ  R+IIP L SQ
Sbjct: 88  LAFTIFTSAVMAEIVRGGLNSIPDNQFEAARSQGFGFAAMLRLIILPQTFRTIIPALFSQ 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNR 387
              ++K+SS    +  A+ +     I+ Q     +++L++ F+   Y  L+  I+LF+  
Sbjct: 148 CTTVIKDSSYLAGINVAEFMYTTRVIMAQATNLSQVLLLYGFVFALYFILNFGISLFVRA 207

Query: 388 LNAKI 392
              ++
Sbjct: 208 YQRRL 212



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 9/70 (12%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVG------AGRLSANKLVAWICRVYVEVFRNIPPL 142
           I+ GFV T  ++   ++ + I+GTL+        GRL   +   WI  +Y+E+FR  P L
Sbjct: 12  IMGGFVRTVEISALAILCSLILGTLLALVKQFCTGRLCVFR---WIVSIYIELFRCTPNL 68

Query: 143 VVIFFLYKSV 152
           + I F+Y +V
Sbjct: 69  LWILFIYFTV 78


>gi|206579836|ref|YP_002239087.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935990|ref|YP_003440049.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|206568894|gb|ACI10670.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288890699|gb|ADC59017.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 218

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 71/116 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++ +G  EA++A+GL+ R     V++P A R +IP L +Q++  +K
Sbjct: 100 SGAYIAEITRGAILSINKGFKEASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL + +G A+L   G  II    +A+E+      IYL L++ ++  + +L  +I
Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLFLTLCLSFLLKQLEKRI 215


>gi|16262492|ref|NP_435285.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|307300764|ref|ZP_07580539.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|14523097|gb|AAK64697.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306904298|gb|EFN34883.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 222

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP   +L +AL     A+  EI+R+G+ ++ +GQ+EA  ALGL+  +  R V++  
Sbjct: 83  GLRLSPNSAAL-LALVVNFGAYGTEIIRAGIESIHKGQVEAGWALGLSRPQIFRYVVMKP 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R++ P LTSQ++ L+ N+S+   +   DL + G  + + T  + E+ +    IYL+LS
Sbjct: 142 ALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQSATFASFEVYIAVTLIYLALS 201

Query: 379 I 379
           +
Sbjct: 202 V 202


>gi|322392133|ref|ZP_08065595.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
 gi|321145033|gb|EFX40432.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
          Length = 229

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 20/173 (11%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG- 259
           G A+ L   +  L+F +P  +LIA   Q+H+                 P+L Q  FI   
Sbjct: 30  GAAMTLQVFALVLVFSIPLGILIAFCLQIHWKLLHYMIDVYIWVMRGTPLLLQLIFIYYV 89

Query: 260 -STVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              V   F  +  A+  +T   AA+ AEI R G+  +P+GQ EAA  L  T     R ++
Sbjct: 90  LPNVGIRFDRVPAAIIAFTLNYAAYFAEIFRGGIATIPQGQYEAAKVLKFTPLATVRYII 149

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    I + L
Sbjct: 150 LPQVTKIVLPSVFNEIMSLVKDTSLVYALGVSDLILASRTAANRDASLIPMFL 202


>gi|319779862|ref|YP_004139338.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317165750|gb|ADV09288.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 224

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 52/73 (71%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AE+ RSG+ ++PRGQ EA+ ALGL      R V+LPQA+R +IPP+TS  +++ K+
Sbjct: 105 SAYSAEVFRSGIESIPRGQFEASQALGLPFLLTLRKVVLPQAIRVVIPPMTSNCVSMFKD 164

Query: 338 SSLAVAVGFADLV 350
           +SLA  V   +L+
Sbjct: 165 TSLASTVALPELL 177


>gi|299069940|emb|CBJ41224.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           CMR15]
          Length = 226

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 15/162 (9%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            RLSR+   +  + + + ++S   I G P L+ + L Y  +   P+LG        ++SP
Sbjct: 46  ARLSRY---RLLRGMVMAWVSA--IRGTPALIHMLLAY--YVVPPLLGL-------SISP 91

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
               +  AL+C T+A++ EI+R  L +VP  Q  AA ALG+  ++  R VLLPQ     I
Sbjct: 92  LAAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREQQVWRHVLLPQVFYRAI 150

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           PPLTS++  LLK SSL   +   +L +V      Q+   +++
Sbjct: 151 PPLTSEFTILLKTSSLMSIIAVPELATVARNASLQSDLPLQV 192


>gi|116671350|ref|YP_832283.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116611459|gb|ABK04183.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Arthrobacter sp. FB24]
          Length = 279

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 59/86 (68%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+++   L  Y AA  AEI+R+G+ ++P+GQ EA + +GLT  ++  ++ LPQA+R ++
Sbjct: 129 QFIAVVAGLVLYNAAVFAEIIRAGIQSLPKGQREAGLTIGLTSFQSRMIIELPQAVRRMM 188

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350
           P L +Q + LLK++SL   V + +L+
Sbjct: 189 PSLVAQLVVLLKDTSLGYIVAYGELL 214


>gi|328881414|emb|CCA54653.1| ABC-type polar amino acid transport system,ATPase component
           [Streptomyces venezuelae ATCC 10712]
          Length = 294

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 78/134 (58%), Gaps = 3/134 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  + L+ + AA+ AEIVR G++AV  GQ EAA +LG+   +  R ++LPQAMRSI+
Sbjct: 161 EMSAAVLGLALHQAAYAAEIVRGGVLAVDEGQAEAAASLGIPRLRQLRRIVLPQAMRSIL 220

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL- 383
           P   ++ ++L K +S+   +   +L      +  + G+ + ++++    Y+ L+  +++ 
Sbjct: 221 PNAANEIISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLMVATAWYVLLTTALSVV 280

Query: 384 --FMNRLNAKIALK 395
             ++ R  AK +++
Sbjct: 281 QHYVERHYAKGSVR 294


>gi|310814769|ref|YP_003962733.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753504|gb|ADO41433.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 264

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 67/116 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P      IAL    A+F+AE+ R+G+++V  GQ+EAA ALGL      R ++ PQAMR++
Sbjct: 130 PLLWRAIIALLLAYASFLAEVFRAGILSVEVGQIEAAKALGLGRWHIFRHIVWPQAMRNV 189

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +PPL + ++ ++K+SSL   +G  D+  +         +  E   +   IYL+++I
Sbjct: 190 LPPLGNDFVAMVKDSSLVSVLGVTDITQLAKLTSASNFRYFETYNVVALIYLTVTI 245


>gi|303240423|ref|ZP_07326940.1| polar amino acid ABC transporter, inner membrane subunit
           [Acetivibrio cellulolyticus CD2]
 gi|302591988|gb|EFL61719.1| polar amino acid ABC transporter, inner membrane subunit
           [Acetivibrio cellulolyticus CD2]
          Length = 236

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 75/122 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++EI+R G+++V  GQMEA  ALGL++R     +++PQA+++I+P L ++++ L+K
Sbjct: 114 SGAYVSEIMRGGIMSVDHGQMEAGRALGLSYRITMLKIVVPQAIKNILPTLGNEFIALIK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG ADL      I   + + +   L+   IY+ L ++IA  +  +  ++   +
Sbjct: 174 ETSVVSFVGTADLYVAFNYIGTNSYEFMVPYLVMAIIYIVLVMIIASLIKIMERRLRKSD 233

Query: 397 KK 398
           ++
Sbjct: 234 RR 235


>gi|260460787|ref|ZP_05809037.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033364|gb|EEW34625.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 210

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 88/178 (49%), Gaps = 13/178 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL  +Y+S F   G P L+ +   + L+F  P +G         + P F +  I L   
Sbjct: 45  RALGAVYVSLFR--GTPCLIQL---FVLYFGGPQIG-------INLDP-FAAGVIGLGLN 91

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AE +R  +IAV RGQ EAA  +G +  +  R V+LPQA R +I PL    + LLK
Sbjct: 92  IGAYMAESIRGAVIAVDRGQTEAARTIGFSRFQTLRKVVLPQAARLMIRPLGVNTVALLK 151

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            S+L   +   +L       I  T +  EI  +   +Y+ +   +A  ++ L+ + A+
Sbjct: 152 GSALVSTISVVELTYTAQRFIGSTYKPFEIFGVAALLYMVMVYALARIVDMLDKRFAI 209


>gi|90409072|ref|ZP_01217197.1| putative ABC-type arginine transport system, permease component
           [Psychromonas sp. CNPT3]
 gi|90309829|gb|EAS37989.1| putative ABC-type arginine transport system, permease component
           [Psychromonas sp. CNPT3]
          Length = 246

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 1/136 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F  + + +     A++ E  R  ++AV +GQ+EAA A G++  K    VL PQ MR
Sbjct: 112 ISPYFAGI-VTIGFIFGAYMTETFRGAILAVDKGQIEAARAYGMSQYKVFSRVLFPQMMR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +L LLK ++L   +G  D+V + G     T Q     L   FI+L  + + 
Sbjct: 171 HALPGIGNNWLVLLKATALVSVIGLQDMVKIAGDAAGATQQPFTFYLAIAFIFLFFTSVS 230

Query: 382 ALFMNRLNAKIALKEK 397
           ++F+     + ++K +
Sbjct: 231 SVFLKWAEHRYSIKVR 246


>gi|16119711|ref|NP_396417.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15162295|gb|AAK90858.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 242

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 4/98 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IALS    A++AEI+RSGL AV +GQ  A +ALG+T       +++PQA R ++P
Sbjct: 88  FVSAVIALSLNEGAYMAEIIRSGLQAVKKGQRTAGLALGMTRFAVMCYIVIPQAARIVLP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           P  +Q + +LK S+L   V   +L+ V     NQT  +
Sbjct: 148 PTGNQMIGMLKTSALVSVVAVEELLLVA----NQTASS 181


>gi|134293670|ref|YP_001117406.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134136827|gb|ABO57941.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 594

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F +  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 163 ISP-FFAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K +S+   +   +L      I  +    I +++   +W  I L++ 
Sbjct: 222 AILPTAFNDLITLAKGTSMVYVLAMPELFYTVQVIYRRNLDVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 282 SAIQVQVERHYARGALR 298


>gi|16804385|ref|NP_465870.1| hypothetical protein lmo2347 [Listeria monocytogenes EGD-e]
 gi|47096045|ref|ZP_00233647.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224503523|ref|ZP_03671830.1| hypothetical protein LmonFR_13622 [Listeria monocytogenes FSL
           R2-561]
 gi|254826828|ref|ZP_05231515.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|254831228|ref|ZP_05235883.1| hypothetical protein Lmon1_07717 [Listeria monocytogenes 10403S]
 gi|254901127|ref|ZP_05261051.1| hypothetical protein LmonJ_14973 [Listeria monocytogenes J0161]
 gi|254938338|ref|ZP_05270035.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|255028989|ref|ZP_05300940.1| hypothetical protein LmonL_07141 [Listeria monocytogenes LO28]
 gi|16411835|emb|CAD00425.1| lmo2347 [Listeria monocytogenes EGD-e]
 gi|47015642|gb|EAL06573.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258599206|gb|EEW12531.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258610950|gb|EEW23558.1| amino acid ABC transporter [Listeria monocytogenes F6900]
          Length = 235

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|329116786|ref|ZP_08245503.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907191|gb|EGE54105.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 522

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G+++V  GQ EAA ALG TH +  R +++PQ MR+I+P   ++++
Sbjct: 386 VSINTGAYMTEIVRGGILSVDNGQFEAATALGFTHGQTMRKIVIPQVMRNILPATGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  Q  Q  +   +   IY  L+  +
Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIAVIYFILTFTV 494


>gi|260914457|ref|ZP_05920926.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pasteurella dagmatis ATCC 43325]
 gi|260631558|gb|EEX49740.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pasteurella dagmatis ATCC 43325]
          Length = 238

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 81/138 (58%), Gaps = 7/138 (5%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+ P F +  IA S    A+ +E VR+ ++++P+GQ EA+ A+G+ +R+A    ++PQ
Sbjct: 102 GITLDP-FPTAIIAFSLNIGAYASETVRAAILSIPKGQWEASYAIGMGYRQAFIRTIIPQ 160

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYL 375
           AMR  +PPL++ +++ +K++SLA  V   +L  +     N    + E IL++     IY 
Sbjct: 161 AMRVSVPPLSNTFISTVKDTSLASLVLVTELFRIAQ---NVAASSYEFILVYSQAALIYW 217

Query: 376 SLSIMIALFMNRLNAKIA 393
            +  ++++   R+  +++
Sbjct: 218 IICFVLSIVQQRVEMRLS 235


>gi|290512796|ref|ZP_06552161.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55]
 gi|289774679|gb|EFD82682.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55]
          Length = 219

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 71/116 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++ +G  EA++A+GL+ R     V++P A R +IP L +Q++  +K
Sbjct: 101 SGAYIAEITRGAILSINKGFKEASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL + +G A+L   G  II    +A+E+      IYL L++ ++  + +L  +I
Sbjct: 161 DTSLFIVIGVAELTRQGQEIIAGNFRALEVWTAVAMIYLFLTLCLSFLLKQLEKRI 216


>gi|257790013|ref|YP_003180619.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|325830079|ref|ZP_08163536.1| ABC transporter, permease protein [Eggerthella sp. HGA1]
 gi|257473910|gb|ACV54230.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|325487546|gb|EGC89984.1| ABC transporter, permease protein [Eggerthella sp. HGA1]
          Length = 450

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 17/211 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF L I + L  + + R    +  +AL   YI+  ++ G P  + I + +   F  
Sbjct: 217 LVIVSFPLAIPIGLLWSFM-RMAKSRVPRALGATYIN--IVRGTPLFLQIYIAF---FGL 270

Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P+LG + +          F+   I L   ++A++AEI R+G+ ++  GQ EAA +LG+  
Sbjct: 271 PLLGIKMDL---------FVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAARSLGMNG 321

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    V++PQ +R +IP +TS+++ + K++SL  AVG  +++    TI   TG     I
Sbjct: 322 AQTMFYVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATGNVTPYI 381

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   F YL ++I +   +N +  ++A   KK
Sbjct: 382 VAAGF-YLIVTIPMTKLINSMEQRMAGGRKK 411


>gi|307319175|ref|ZP_07598605.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306895282|gb|EFN26038.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 222

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 1/121 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP   +L +AL     A+  EI+R+G+ ++ +GQ+EA  ALGL+  +  R V++  
Sbjct: 83  GLRLSPNSAAL-LALVVNFGAYGTEIIRAGIESIHKGQVEAGWALGLSRPQIFRYVVMKP 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R++ P LTSQ++ L+ N+S+   +   DL + G  + + T  + E+ +    IYL+LS
Sbjct: 142 ALRTVYPALTSQFIYLMLNTSVVSVISADDLAAAGNDLQSATFASFEVYIAVTLIYLALS 201

Query: 379 I 379
           +
Sbjct: 202 V 202


>gi|289671691|ref|ZP_06492581.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
 gi|330980535|gb|EGH78638.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 246

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTIWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|290955800|ref|YP_003486982.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260645326|emb|CBG68412.1| putative transport system transmembrane component [Streptomyces
           scabiei 87.22]
          Length = 328

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 18/226 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-- 238
           +T++  A   V   + GI+L+L   RLS        +++  +YI  + +  +P +V++  
Sbjct: 83  ITLEVTAYSAVLGLIGGILLAL--ARLS---DSPVLRSVSWVYI--WALRSIPLIVVLLF 135

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                AL   L    P    F     S ++ +     I LS   AA+ AE+VR G+++V 
Sbjct: 136 LYNFSALYQTLSLGVPFGPAFFTFDESRLATDMAVAVIGLSLNEAAYAAEVVRGGILSVD 195

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV--- 350
           +GQ EAA ALGL      R ++ PQA+RSI P   +Q + L+K++SL   V   DL    
Sbjct: 196 QGQHEAASALGLPKGYQFRRIVFPQALRSITPNYVNQLIGLIKSTSLVFYVSLLDLFGTA 255

Query: 351 -SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            ++G T        + +  +W  I  S+  +I  ++ R  A+ A +
Sbjct: 256 QAMGSTYPGDIVPLLLVSTVWYLILTSVVSVIQFYVERYYARGATR 301


>gi|271502392|ref|YP_003335418.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345947|gb|ACZ78712.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 227

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 17/207 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL- 251
           + VLG+VL+L   R SR         L   YIS F   G+P+LV +   + ++F  P L 
Sbjct: 37  AIVLGLVLAL--VRESRFV---VVSKLVEFYISLFR--GIPSLVQL---FIIYFGLPQLF 86

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              N +   T +       I  S   +A++AEI R+ L +V  GQ EA +++G+   +  
Sbjct: 87  PSLNGLSAMTAA------IIGFSLKNSAYMAEIFRAALASVDFGQTEAGLSVGMNKVQIY 140

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQAM + +P   + +++L+K++S+A A+G ++L + G  I  ++ +  E  L+  
Sbjct: 141 RRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKMIAAESLRFFETFLVVG 200

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  L ++ +   ++L  K++   ++
Sbjct: 201 LIYWMLIVVYSWLQSQLEKKLSHSRQR 227


>gi|81428468|ref|YP_395468.1| amino acid ABC transporter transmembrane protein [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78610110|emb|CAI55159.1| Putative amino acid ABC transporter, membrane-spanning subunit
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 213

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA     AA+ AEI R G  AV  GQ+EAA  LGLT+ +    +++PQ ++ ++
Sbjct: 83  RFDAALIAFILNYAAYFAEIFRGGFQAVDDGQIEAASVLGLTYPQTILKIIVPQTVKIVL 142

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + ++ +NL+K+SSL   +G  DL+  G     +    + ++L+ + IYL+L+ +    
Sbjct: 143 PSVGNEVINLIKDSSLVYVIGIGDLLRAGNVASARDVNLVPLLLVGV-IYLALTAICTWL 201

Query: 385 MNRLN 389
           + RL 
Sbjct: 202 LGRLE 206


>gi|327396675|dbj|BAK14096.1| probable amino-acid ABC transporter permease protein YckA [Pantoea
           ananatis AJ13355]
          Length = 216

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 1/117 (0%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           C++  F+AEI RSG+ +V RGQ+EAA ++G++  KA R V+LPQA    +PP ++  + +
Sbjct: 96  CFST-FLAEIFRSGIESVDRGQLEAARSMGMSFFKAMRRVILPQAFHVALPPYSNTLVMM 154

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LK+S+LA  +   ++   G  +   T     +  +   +YL+L + +  F   L  +
Sbjct: 155 LKDSALASTIAVTEMTRQGQLLAASTFDNTTVYTLVALLYLTLCMPLLAFTKHLENR 211


>gi|320334509|ref|YP_004171220.1| polar amino acid ABC transporter inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
 gi|319755798|gb|ADV67555.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
          Length = 272

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 15/207 (7%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V   +LG+V  L  T      R     +    +  PLL    F+   LP L+    K  +
Sbjct: 69  VIGLILGVVAGLMKTSAYWIVRAPASLYVWLMRGTPLLVQILFVYNALP-LLFPPFKALM 127

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +     G +   GG    PE ++   AL+    A+ AE++R+G+ AVPRGQ EAA +LG
Sbjct: 128 DWA----GTWPIEGG----PEIIAGITALALNVGAYNAEVIRAGIQAVPRGQGEAARSLG 179

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +A   ++LPQA+R ++PPL +  + LLK++SL  ++   +L   G  + ++T + +
Sbjct: 180 LSGGQAMLTIILPQALRIVVPPLVNNVVALLKDTSLVSSIALLELTLAGNRVSSETFKPV 239

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
             +     +YL+L+ ++  F ++L  +
Sbjct: 240 PSLATIGGVYLALTTVLTFFTDQLERR 266


>gi|317472159|ref|ZP_07931491.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|316900563|gb|EFV22545.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 225

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 28/179 (15%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALKYQL--- 244
           +    LG +L+L      R   E+ GK+     + Y+   +I G PT+  + + Y +   
Sbjct: 34  ILGVALGTILALM-----RMTAERRGKSTLLSKIAYVYIDIIRGTPTVTQLLIMYFVVLK 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D  ++G   F                    +AA++AEI+R+G++AV  GQME   +LG
Sbjct: 89  GVDGLIVGTVTF-----------------GLNSAAYVAEIIRAGILAVDHGQMEGGRSLG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           L++ +  + ++LPQA+++I+P L ++++ L+K +++   V   DL  V   + ++T +A
Sbjct: 132 LSYGQTMKDIILPQAVKNILPALGNEFIVLIKETAILGYVSIVDLTKVADFVTSRTYEA 190


>gi|160941893|ref|ZP_02089220.1| hypothetical protein CLOBOL_06789 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435390|gb|EDP13157.1| hypothetical protein CLOBOL_06789 [Clostridium bolteae ATCC
           BAA-613]
          Length = 226

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 4/124 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S    AF++E +R  LI+V  GQ EAA+A G+T  + T  +++PQA+R  +PPL + 
Sbjct: 101 VIMSLNMGAFVSESIRGALISVDEGQREAAMAFGMTGFQMTIRIVIPQAIRVALPPLFND 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386
            +NL K SSLA  VG  D++         T Q  E    ++LI+  I L L+ +  +   
Sbjct: 161 LINLFKMSSLAFLVGVRDVMGAAKIEGANTFQFFECYACVMLIYWVITLILTAIQKVLEK 220

Query: 387 RLNA 390
           R NA
Sbjct: 221 RCNA 224


>gi|26249862|ref|NP_755902.1| amino-acid ABC transporter permease YhdY [Escherichia coli CFT073]
 gi|26110290|gb|AAN82476.1|AE016767_236 Hypothetical amino-acid ABC transporter permease protein yhdY
           [Escherichia coli CFT073]
          Length = 368

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 222 FMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 281

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 282 MPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 317


>gi|325519342|gb|EGC98767.1| amino acid ABC transporter, permease protein [Burkholderia sp.
           TJI49]
          Length = 231

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 15/221 (6%)

Query: 185 TNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T  K+ V S V G  L++   FA         +  KA       T +I G P LV I L 
Sbjct: 19  TTVKLLVISAVFGFGLAIAVAFARLSPNPLVARGSKAF------TEVIRGTPLLVQIYLI 72

Query: 242 YQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           Y  +    +   +  +  S + P     F  +  AL     A++ E++R+GL  VP+G++
Sbjct: 73  Y--YGVGSLFAGWPALRDSVLWPFLRDGFWYVAFALVISVGAYVGEVLRAGLRGVPKGEI 130

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A+G+      R V LP+A++ ++P L  + + +LK+++LA  V   D++     I 
Sbjct: 131 EAARAMGMRPSMIARRVWLPRAIQILLPTLAGETVMMLKSTALASTVAVMDVLGAANYIR 190

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            QT +  E +L    IY+ L+ +I     RL  ++ ++  +
Sbjct: 191 AQTLRTYEPLLAIAVIYVVLAFLIERVFGRLERRVPVRMPR 231


>gi|320184056|gb|EFW58876.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella flexneri CDC 796-83]
          Length = 367

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLTLGYWKTQGLVILPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|258654114|ref|YP_003203270.1| polar amino acid ABC transporter inner membrane subunit
           [Nakamurella multipartita DSM 44233]
 gi|258557339|gb|ACV80281.1| polar amino acid ABC transporter, inner membrane subunit
           [Nakamurella multipartita DSM 44233]
          Length = 233

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 3/105 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+ F+ E +RSG+  VP GQ EAA A+GL   +   +V+LPQA+R++I PL S  + L 
Sbjct: 112 YTSTFVCEAIRSGINTVPPGQAEAARAIGLKFTQVLGIVVLPQAIRAVIAPLGSVLIALT 171

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSL 377
           KN+++A A+G A+   +  T++        A+ +++   FI L+L
Sbjct: 172 KNTTVASAIGVAEAALLMNTLLENEADKFTAVFLVIAAGFIVLTL 216


>gi|206577524|ref|YP_002237665.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288934542|ref|YP_003438601.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290508742|ref|ZP_06548113.1| polar amino acid transport system ATP-binding protein [Klebsiella
           sp. 1_1_55]
 gi|206566582|gb|ACI08358.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288889251|gb|ADC57569.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289778136|gb|EFD86133.1| polar amino acid transport system ATP-binding protein [Klebsiella
           sp. 1_1_55]
          Length = 312

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 22/220 (10%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVF-SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---- 225
           + N  LS P       A+ F   S + G++++L  T +S  F    G  L L+ +S    
Sbjct: 37  MGNSMLSNPRFEWSVIAENFTGPSIIQGVLMTLQLTAISVIFGFAGGTILALMRLSSNPV 96

Query: 226 --------TFLIFGLPTLVLIALKYQL-------HFDKPVLGQ-FNFIGGSTVSPEFMSL 269
                   T+   G+P LV + L Y +           P +G+ ++    S +SP F + 
Sbjct: 97  LVAVSWGYTWFFRGVPMLVQLFLWYNIAALYPTISISLPWVGEIWSASANSLISP-FSAA 155

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL  + +A+ AEI+R+G+ +V  GQ+EAA ALG    +     +LPQAMR+I+PP  +
Sbjct: 156 VIALVMHQSAYAAEIIRAGIQSVGTGQVEAARALGYRPAQIFLHTILPQAMRAILPPAGN 215

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + +  LK +++   +   D++     I  +T + I ++L+
Sbjct: 216 EVIGQLKTTAVVSVISLQDVLFSAQIIYQRTYEVIPLLLV 255


>gi|167564741|ref|ZP_02357657.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia oklahomensis EO147]
 gi|167574721|ref|ZP_02367595.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia oklahomensis C6786]
          Length = 240

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 12/199 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259
           A +LSRH   ++ + L  LY + F   G+P L++I   Y  +F    L    GQ+    G
Sbjct: 45  AAKLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEG 96

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G+  R   R +L+PQ 
Sbjct: 97  FVGVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPARMVLRRILIPQV 156

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P + + +   LK+S+L    G A+L+       N T Q     +    +YL ++ 
Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTG 216

Query: 380 MIALFMNRLNAKIALKEKK 398
           +     NR+ A +    ++
Sbjct: 217 LSNRVFNRVEAHVGRSFRR 235



 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 34/67 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             + + +L+  + T  L  + +    + G LV A +LS ++    +  +Y  VFR +P L
Sbjct: 12  DGWGSVLLLAALMTVALTLAALAVGAVFGALVAAAKLSRHRSARLLGDLYTTVFRGVPEL 71

Query: 143 VVIFFLY 149
           +VI+  Y
Sbjct: 72  LVIYLFY 78


>gi|166213863|ref|ZP_02239898.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166205037|gb|EDR49517.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
          Length = 218

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 70/118 (59%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  + ++  G  EA +ALGL+ R     V+ P A+R ++PPL +Q++  +K
Sbjct: 100 SGAYIAEITRGAVPSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + RL  K+ +
Sbjct: 160 DTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217


>gi|116670156|ref|YP_831089.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116610265|gb|ABK02989.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 271

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 65/104 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS    A+I EIVR  + +V  GQ+EA+ +LGL + K+ + V++PQA + + P L +Q
Sbjct: 148 LTLSLNAGAYITEIVRGSIQSVDPGQLEASRSLGLGYAKSMQKVVVPQAFKIMTPSLINQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            + +LK+SSL +A+GFA+L+  G  I     +  E +LI   +Y
Sbjct: 208 LIIMLKDSSLLLAIGFAELLYQGQQIYAGNFRITETLLIVAVLY 251


>gi|313890332|ref|ZP_07823964.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121318|gb|EFR44425.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 523

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++ EIVR G+ AV +GQ EAA ALG +H +  R ++LPQ +R+I+P   ++++
Sbjct: 384 VSINTGAYMTEIVRGGIFAVDQGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L   G T+  Q  Q  +   +   IY  L+  +
Sbjct: 444 INIKDTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIALIYFILTFTV 492


>gi|291619133|ref|YP_003521875.1| YhdY [Pantoea ananatis LMG 20103]
 gi|291154163|gb|ADD78747.1| YhdY [Pantoea ananatis LMG 20103]
          Length = 366

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 220 FMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQMLVI 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++  IP L +  + L K++SL + +G  DL S
Sbjct: 280 LPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFS 315


>gi|262278836|ref|ZP_06056621.1| glutamate/aspartate transport system permease GltJ [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259187|gb|EEY77920.1| glutamate/aspartate transport system permease GltJ [Acinetobacter
           calcoaceticus RUH2202]
          Length = 280

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 73/123 (59%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA ++E +R+G+  V  GQ  AA A+G T  ++ R V+LP A R++ P +TS+ 
Sbjct: 150 ALGLYTAARVSEHIRAGINTVSTGQKFAASAVGFTTAQSYRYVILPVAYRTVWPTITSEA 209

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +N+ KNS++  A+   +  +   T+  +T Q I I+++   +YL ++  I   M  +  +
Sbjct: 210 MNVFKNSAVLYALSVLNFFAYTKTMREETSQDIIILILSTPVYLIITYSIKFVMAWIEKR 269

Query: 392 IAL 394
           +A+
Sbjct: 270 MAV 272



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           G     W A    + A ++G+L+G  R   NK +A+I   YVE+FRNIP +V +FF
Sbjct: 54  GVFTMVWTAIIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFF 109


>gi|209558800|ref|YP_002285272.1| Putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes NZ131]
 gi|209540001|gb|ACI60577.1| Putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes NZ131]
          Length = 498

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 57/88 (64%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 383 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 442

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQT 360
             +K++S+   +   +L   G T+  QT
Sbjct: 443 INIKDTSVLNVISVVELYFSGNTVATQT 470


>gi|126653498|ref|ZP_01725591.1| putative amino acid ABC transporter, permease protein [Bacillus sp.
           B14905]
 gi|126589776|gb|EAZ83910.1| putative amino acid ABC transporter, permease protein [Bacillus sp.
           B14905]
          Length = 253

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 2/106 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA ++E++RS  +A+P+GQ EAA+++GLT  +A R ++ PQA+   +P   +  + LL+ 
Sbjct: 127 AAIMSEVMRSAYLAIPKGQFEAAVSVGLTPIQAYRRIIFPQALVVALPNFGNGMIALLQE 186

Query: 338 SSLAVAVGFADLVSVGGTII--NQTGQAIEIILIWMFIYLSLSIMI 381
            +LA  +G  D+V     II  N    A+EI +    IY  LSI+I
Sbjct: 187 GALAYTIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIII 232


>gi|86360052|ref|YP_471941.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli CFN
           42]
 gi|86284154|gb|ABC93214.1| probable amino acid ABC transporter, ATP-binding protein [Rhizobium
           etli CFN 42]
          Length = 591

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + ++ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAMRSI+P
Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSILP 225

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K++S+   +   +L      I  +  + I +++   +W  I +++  +  
Sbjct: 226 TGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVAQ 285

Query: 383 LFMNRLNAKIALK 395
            ++ R  ++ A++
Sbjct: 286 HYIERYFSRGAVR 298


>gi|16262711|ref|NP_435504.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|307312873|ref|ZP_07592502.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|14523337|gb|AAK64916.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306899387|gb|EFN30020.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 227

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 10/168 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFI 281
           T++  G P LV I + Y   +  P   QF +I  S   P     F    +ALS  T A++
Sbjct: 57  TYVFRGTPILVQIFIVY---YGLP---QFEWIRESIFWPILRDPFGCAILALSLNTGAYL 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI R G++AV RG +EA  ALG++       +  P A+R  +P   ++ ++L+K+++LA
Sbjct: 111 SEIFRGGVLAVERGLLEAGAALGMSATHRFIYITTPLAIRIALPAYGNEVISLMKSTALA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +   D+  +G TI+ +T    ++ L    +Y++++ +I   + RL 
Sbjct: 171 STITLVDMTGIGRTIVAETFAPYQVFLSLAIVYVAITWIIQRSVKRLE 218


>gi|33592624|ref|NP_880268.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|33572270|emb|CAE41822.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
          Length = 230

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 18/206 (8%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +F  S VL + L L     RLS+      G  L   YI   +I G P L+ +   + +++
Sbjct: 23  LFFCSAVLAVALGLLVCLCRLSKSRVLSRGARL---YID--IIRGTPLLLQL---FYIYY 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG         V   F++  + L+    A++AE+ RSG+ +V  GQ EAA ALGL 
Sbjct: 75  GMPELG--------VVINAFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLN 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LPQA+R++ P L +  L L+K +SL   +   +L+  G  +   T QA+ +
Sbjct: 127 KVDRLRRVVLPQAVRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTV 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   IY ++  ++A    R   ++
Sbjct: 187 YTMVGAIYFAMCSVLAHLFRRSEKRL 212


>gi|317489459|ref|ZP_07947969.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
 gi|316911388|gb|EFV32987.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
          Length = 458

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 110/211 (52%), Gaps = 17/211 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF L I + L  + + R    +  +AL   YI+  ++ G P  + I + +   F  
Sbjct: 225 LVIVSFPLAIPIGLLWSFM-RMAKSRVPRALGATYIN--IVRGTPLFLQIYIAF---FGL 278

Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P+LG + +          F+   I L   ++A++AEI R+G+ ++  GQ EAA +LG+  
Sbjct: 279 PLLGIKMDL---------FVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAARSLGMNG 329

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    V++PQ +R +IP +TS+++ + K++SL  AVG  +++    TI   TG     I
Sbjct: 330 AQTMFYVIIPQTVRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATGNVTPYI 389

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   F YL ++I +   +N +  ++A   KK
Sbjct: 390 VAAGF-YLIVTIPMTKLINSMEQRMAGGRKK 419


>gi|116334342|ref|YP_795869.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099689|gb|ABJ64838.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 218

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 30/182 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSC 275
           + LPL+ I  F  FGLP L                          V P+ +   I A++ 
Sbjct: 65  RNLPLILILFFTYFGLPNL-------------------------GVKPDVIPAAILAMTI 99

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +  +AEIVRSG+ AV  GQME A A GLT+ +A   ++LPQA+  +IP L SQ+++L+
Sbjct: 100 FESTMLAEIVRSGIQAVDPGQMEGARANGLTYWQALWYIVLPQALVKMIPALVSQFISLV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K++SLA  +   +++     I  Q    I    I MF+ +++   I  ++  + A+   K
Sbjct: 160 KDTSLATIILLPEMLFRSQIIYGQNTNYI----IPMFVAIAVMYFIVCYLLSVLARYLEK 215

Query: 396 EK 397
            +
Sbjct: 216 RQ 217


>gi|187478451|ref|YP_786475.1| glutamine ABC transporter permease [Bordetella avium 197N]
 gi|115423037|emb|CAJ49568.1| glutamine ABC transporter, permease protein [Bordetella avium 197N]
          Length = 219

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 14/218 (6%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           + P L   T    KI  +  V G +L   A  ++R +  +    +  +Y++  +I G P 
Sbjct: 11  ALPNLLEGTIMTVKITFWGLVGGFILGALAG-VARAYGPRAVAIIAQIYVA--IIRGTPI 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   Y   F  P++     I G  V  E  ++ + L   + A+IAEIVR  L++V R
Sbjct: 68  VVQVMFIY---FALPLM-----IPGMRVEAESAAI-VTLMINSGAYIAEIVRGSLLSVAR 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G  EA  A+GL   K    ++ P A R +IP L +Q +  LK+SSL + +G A+L   G 
Sbjct: 119 GLKEAGQAMGLPFWKILCHIIGPVAFRRMIPSLGNQCIISLKDSSLFIVIGVAELTRQGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I+    +A+EI      +YL L+ ++AL +  L  ++
Sbjct: 179 EIMASNFRAVEIWSAVAIVYLILTGLMALGLRLLEKRM 216



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 18/133 (13%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F G++   I+G L G  R    + VA I ++YV + R  P +V + F+
Sbjct: 15  LLEGTIMTVKITFWGLVGGFILGALAGVARAYGPRAVAIIAQIYVAIIRGTPIVVQVMFI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y ++  ++P          GM +     +  TL +++ A  ++   V G +LS     ++
Sbjct: 75  YFALPLMIP----------GMRVEAESAAIVTLMINSGA--YIAEIVRGSLLS-----VA 117

Query: 209 RHFHEKTGKALPL 221
           R   E  G+A+ L
Sbjct: 118 RGLKE-AGQAMGL 129


>gi|291619610|ref|YP_003522352.1| YckA [Pantoea ananatis LMG 20103]
 gi|291154640|gb|ADD79224.1| YckA [Pantoea ananatis LMG 20103]
          Length = 216

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 1/117 (0%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           C++  F+AEI RSG+ +V RGQ+EAA ++G++  KA R V+LPQA    +PP ++  + +
Sbjct: 96  CFST-FLAEIFRSGIESVDRGQLEAARSMGMSFFKAMRRVILPQAFHVALPPYSNTLVMM 154

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LK+S+LA  +   ++   G  +   T     +  +   +YL+L + +  F   L  +
Sbjct: 155 LKDSALASTIAVTEMTRQGQLLAASTFDNTTVYTLVALLYLTLCMPLLAFTKHLENR 211


>gi|257470563|ref|ZP_05634653.1| amino acid ABC transporter permease [Fusobacterium ulcerans ATCC
           49185]
 gi|317064769|ref|ZP_07929254.1| amino acid ABC transporter [Fusobacterium ulcerans ATCC 49185]
 gi|313690445|gb|EFS27280.1| amino acid ABC transporter [Fusobacterium ulcerans ATCC 49185]
          Length = 208

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 113/212 (53%), Gaps = 19/212 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++      +FS  LGI+LSL   R+S++          ++ + T++  G P L+ +  
Sbjct: 14  LTVNLYVVTMLFSLPLGILLSL--GRVSKNTTLSN-----MIQVYTWVFRGTPLLLQL-- 64

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + +++  PV+G        T++P F +  +       A+  EI R  ++ +  GQ EAA
Sbjct: 65  -FFVYYGLPVVG-------ITLTP-FAAASLTFVINYTAYFCEIFRGSILGIDPGQYEAA 115

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LG+ + +    +++PQA+ + +PPL+++ ++L+K++SL  A+G A+++     ++ + 
Sbjct: 116 KVLGMKYWQTMIRIIIPQALITALPPLSNEAISLIKDTSLVSAIGMAEILRNSRELVTR- 174

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +I    I   +YL LS ++ +F  R+  K+
Sbjct: 175 DFSITPFFICAVVYLGLSTIVVIFFKRMEKKV 206


>gi|255023478|ref|ZP_05295464.1| L-cystine transport system permease protein TcyM [Listeria
           monocytogenes FSL J1-208]
          Length = 235

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G T +  P  + + IALS    A++ EI+RSG++AV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGITANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|226366163|ref|YP_002783946.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226244653|dbj|BAH55001.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 226

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/78 (46%), Positives = 52/78 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS YTAAF+ E +RSG+  V  GQ EA  +LGLT  +  RL++LPQA R++  PL S 
Sbjct: 101 LGLSIYTAAFVCESLRSGINTVHVGQAEAGRSLGLTFSQNLRLIVLPQAFRAVTAPLGSV 160

Query: 331 YLNLLKNSSLAVAVGFAD 348
            + L KN+++A  +G A+
Sbjct: 161 LIALTKNTTIASVIGVAE 178


>gi|78186898|ref|YP_374941.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78166800|gb|ABB23898.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Chlorobium luteolum DSM 273]
          Length = 990

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 19/212 (8%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I V S + G VL   + A R+S     KT K L  ++IS  L+ G P LVL+ L + + F
Sbjct: 791 ISVLSALFGTVLGAGVCAMRMS---SAKTLKTLASVFIS--LLRGTPVLVLLMLIFYVVF 845

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                         ++ P  +++ IA     AA++AEI RSG+ ++  GQ EA I++G T
Sbjct: 846 -----------ASVSIDPVAVAV-IAFGLNFAAYVAEIFRSGVESIDNGQREAGISMGFT 893

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +   L++LPQ ++ I+P    ++L+L+K +S+   +   DL   G  I ++T  A   
Sbjct: 894 RLRTFLLIILPQTIQRILPVYKGEFLSLVKMTSIVGYIAVEDLTKAGDIIRSRTFDAFFP 953

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +++   +Y S+S ++   M  L  +   K K+
Sbjct: 954 LIMVAILYFSISWLLLQSMAYLERRTDPKFKR 985


>gi|308126407|ref|ZP_07663749.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AQ4037]
 gi|308108538|gb|EFO46078.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AQ4037]
          Length = 118

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 51/70 (72%)

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR GL A+P+GQ EAA ALGL++ K T L++LPQA++  IP + + ++ L K++SL + 
Sbjct: 1   MVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNTFIGLFKDTSLVLI 60

Query: 344 VGFADLVSVG 353
           +G  D++ +G
Sbjct: 61  IGMFDVLGIG 70


>gi|301155428|emb|CBW14894.1| predicted transporter subunit: membrane component of ABC
           superfamily [Haemophilus parainfluenzae T3T1]
          Length = 238

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 6/131 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ ++A+P+GQ EA+ A+G+ + +A    ++PQA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASILAIPKGQWEASYAIGMNYTQAFVRTIMPQALRISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIA 382
            L++ +++ +K++SLA  V  A+L  V     N T +  E ILI+     IY     +++
Sbjct: 168 SLSNTFISTVKDTSLASLVWIAELFRVAQ---NITAENYEFILIYSEAALIYWVFCFVLS 224

Query: 383 LFMNRLNAKIA 393
           +   RL  +++
Sbjct: 225 MGQTRLEKRLS 235


>gi|295107460|emb|CBL05003.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 220

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 77/134 (57%), Gaps = 8/134 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +A + +T+A +AEIVR GL +VP GQ EAA + G +  +   L++LPQA+R++
Sbjct: 82  PPIGAAVLAFTLFTSASVAEIVRGGLASVPFGQYEAAKSQGFSTVQTYLLIILPQALRNM 141

Query: 324 IPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEII-------LIWMFIYL 375
           +P L SQ++  +K++S L  A+   +L+  G  ++N     ++I        LI+  +  
Sbjct: 142 VPALLSQFVTTIKDTSYLWGAMALQELMGRGMILMNSYNSTVQIFAIFGIMALIYFVVCF 201

Query: 376 SLSIMIALFMNRLN 389
           +LS ++  +  RL 
Sbjct: 202 TLSQIVRAYQRRLK 215


>gi|283768561|ref|ZP_06341473.1| ABC transporter, permease protein [Bulleidia extructa W1219]
 gi|283104953|gb|EFC06325.1| ABC transporter, permease protein [Bulleidia extructa W1219]
          Length = 224

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 22/210 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF  G+++++ A  +    + K      L+ I  +LI G P LV + +   + +  PV+G
Sbjct: 31  SFFFGLIIAVLAALVQ---YAKIPVVKKLVRIYVWLIRGTPLLVQLMI---IFYGLPVIG 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                     S  F++  +  S    A+++E +R  L ++PRGQ EA   +G+   +   
Sbjct: 85  --------IQSNPFVAATVGFSICEGAYMSEAIRGALESIPRGQSEAGYCVGMNFVQVMW 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIIL 368
            ++LPQA R+  P L++  ++L+K+SSLA  +   ++        G         IE+ L
Sbjct: 137 YIVLPQAFRTAFPALSNSLISLVKDSSLAANITVVEMFMTTQRFAGKFYTFMPLYIEVAL 196

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +YL    +I  F +R+  K++  E+K
Sbjct: 197 ----VYLLFCTIITFFQSRIEKKLSRYERK 222


>gi|283455706|ref|YP_003360270.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|283102340|gb|ADB09446.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
          Length = 443

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 23/229 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           FL     S P L +     +F  V SF + ++L + A  L R    +    +  +Y++ F
Sbjct: 230 FLGLAKQSLPALMIGLKNTLFITVISFAIALLLGV-AFGLMRVGENRVASGVSKVYVAIF 288

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAE 283
              G P LV     +  +F  P L     IG S      ++++IA    LS  + A++AE
Sbjct: 289 R--GTPILVW---AFFFYFGVPQL-----IGHS------VNIWIAGALTLSLNSGAYLAE 332

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  + AV  GQME A +LGL  R++   V+LPQA +  +P + +Q + ++K+SSL +A
Sbjct: 333 IVRGAIQAVDPGQMEGARSLGLNRRQSMARVILPQASKIAMPSVINQLVIMIKDSSLLLA 392

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +GF +L+     +     +  E +L+   IY     M+    N ++ K+
Sbjct: 393 IGFGELLYQAQQLYAANFRVTETLLLVGVIYFVAITMLTWLANIVDRKV 441



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+++G  NT ++       A ++G   G  R+  N++ + + +VYV +FR  P LV  FF
Sbjct: 240 ALMIGLKNTLFITVISFAIALLLGVAFGLMRVGENRVASGVSKVYVAIFRGTPILVWAFF 299

Query: 148 LY 149
            Y
Sbjct: 300 FY 301


>gi|323342023|ref|ZP_08082256.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322464448|gb|EFY09641.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 537

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 74/122 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T+A+++EI+R+G+ A+ +GQ EAA +LG+T  +  R V+LPQA+R+ IP + ++
Sbjct: 392 IIISINTSAYMSEIIRAGIQAIDKGQNEAARSLGMTEAQTLRYVILPQAIRNAIPAIGNE 451

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K+SS+   +  ++L   G  +     + +E   I   IYL L+I     +N +  
Sbjct: 452 FVVNIKDSSVLNVITVSELFFQGNRLTGIYYRQMEPFFIVSLIYLVLTICSTQILNMIEK 511

Query: 391 KI 392
           ++
Sbjct: 512 RM 513


>gi|224282755|ref|ZP_03646077.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313139915|ref|ZP_07802108.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313132425|gb|EFR50042.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 225

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG+VL +       + R     + +  K LPL  I  F++ G             
Sbjct: 29  LFSLILGVVLVMMRISPISSLRTVAGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EAA AL
Sbjct: 76  -----AYAQLKLTFSDTFATNFFWLSVTGLSLYTAAFVCESLRSGINTVPIGQAEAARAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTG 361
           GL   ++   ++LPQA R  + PL +  + LLKN +  A A    +  S+  T+I     
Sbjct: 131 GLGFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSTMIEFHPD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 191 VIVQIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|220909976|ref|YP_002485287.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7425]
 gi|219866587|gb|ACL46926.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7425]
          Length = 283

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 19/181 (10%)

Query: 231 GLPTLVLIAL--------KYQLHFDKPVLGQFNFI----GGSTVSPEFMSLY---IALSC 275
           G PTLV + L          QL FD   L  FN +      S VSP F  ++   + LS 
Sbjct: 101 GTPTLVQLLLWGFGIGTVMSQLGFDPRALA-FNLLTPLQSNSLVSPVFNFIFYGVLGLSF 159

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A++ E+ R+G+ ++ RGQ EAA++LGL   +    ++LPQA+R  IPP T+ ++ L+
Sbjct: 160 NYGAYLTEVFRAGIESISRGQTEAALSLGLDSVQTMGRIVLPQAIRLTIPPFTNNFITLI 219

Query: 336 KNSSLAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+L   +G  +L  V  +    +      + + ++    YL+L   ++     L  K+
Sbjct: 220 QDSALLSTIGVTELQQVTSSFAYPLTNPNDKLFVFILGALFYLALCYPLSRLARYLERKL 279

Query: 393 A 393
           A
Sbjct: 280 A 280


>gi|307555365|gb|ADN48140.1| hypothetical amino-acid ABC transporter permease protein YhdY
           [Escherichia coli ABU 83972]
          Length = 367

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 60/96 (62%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 221 FMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PQA++ +IP L +  + L K++SL + +G  DL S
Sbjct: 281 MPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFS 316


>gi|302671182|ref|YP_003831142.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus
           B316]
 gi|302395655|gb|ADL34560.1| amino acid ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 225

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +A      A+ AE+ RS ++A+P+GQMEAA  +GL++ +A   V+LPQ+     P
Sbjct: 90  FPSAVLAFGLNLGAYNAEVFRSAILAIPKGQMEAAYMIGLSYPQAMIRVILPQSFPVAFP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +  ++LLK+++LA ++   DL +    I  +T +   + L   FIYL  S  +    
Sbjct: 150 NLFNNLISLLKDTALASSITVIDLFTTAQQIAARTYEPFALYLEAAFIYLIFSTALTWLQ 209

Query: 386 NRLNAKIALK--EKK 398
             L  K+  K  +KK
Sbjct: 210 RYLEQKLVWKSSDKK 224


>gi|225163909|ref|ZP_03726201.1| polar amino acid ABC transporter, inner membrane subunit
           [Opitutaceae bacterium TAV2]
 gi|224801486|gb|EEG19790.1| polar amino acid ABC transporter, inner membrane subunit
           [Opitutaceae bacterium TAV2]
          Length = 216

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 76/133 (57%), Gaps = 1/133 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ ++ +GQ E A  LG ++ +  R ++LPQ ++ I
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIQSIDKGQYEGARVLGFSYPQTMRRIVLPQMVKRI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   DL+     I+ +       I+   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTTSPFIVAAAF-YLLMTLVLTW 203

Query: 384 FMNRLNAKIALKE 396
              RL  + A+ +
Sbjct: 204 GFQRLEKRHAVYD 216


>gi|78186724|ref|YP_374767.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78166626|gb|ABB23724.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Chlorobium luteolum DSM 273]
          Length = 990

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 19/212 (8%)

Query: 189 IFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I V S + G VL   + A R+S     KT K L  ++IS  L+ G P LVL+ L + + F
Sbjct: 791 ISVLSALFGTVLGAGVCAMRMS---SAKTLKTLASVFIS--LLRGTPVLVLLMLIFYVVF 845

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                         ++ P  +++ IA     AA++AEI RSG+ ++  GQ EA I++G T
Sbjct: 846 -----------ASVSIDPVAVAV-IAFGLNFAAYVAEIFRSGVESIDNGQREAGISMGFT 893

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +   L++LPQ ++ I+P    ++L+L+K +S+   +   DL   G  I ++T  A   
Sbjct: 894 RLRTFLLIILPQTIQRILPVYKGEFLSLVKMTSIVGYIAVEDLTKAGDIIRSRTFDAFFP 953

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +++   +Y S+S ++   M  L  +   K K+
Sbjct: 954 LIMVAILYFSISWLLLQSMAYLERRTDPKFKR 985


>gi|89099282|ref|ZP_01172160.1| YqiY [Bacillus sp. NRRL B-14911]
 gi|89086128|gb|EAR65251.1| YqiY [Bacillus sp. NRRL B-14911]
          Length = 219

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 57/74 (77%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+I+EI+R+G++AV +GQ EA++ALG+ +++    ++LPQA+++I+P L ++++ L K
Sbjct: 100 SAAYISEIIRAGILAVDKGQREASMALGIPYKRMMWDIILPQALKNILPALMNEFITLTK 159

Query: 337 NSSLAVAVGFADLV 350
            S++   +G  D++
Sbjct: 160 ESAIVTTIGVMDIM 173


>gi|33595878|ref|NP_883521.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis 12822]
 gi|33600408|ref|NP_887968.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
 gi|33565957|emb|CAE36507.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33568007|emb|CAE31920.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 230

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 101/206 (49%), Gaps = 18/206 (8%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +F  S VL + L L     RLS+      G  L   YI   +I G P L+ +   + +++
Sbjct: 23  LFFCSAVLAVALGLLVCLCRLSKSRVLSRGARL---YID--IIRGTPLLLQL---FYIYY 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG         V   F++  + L+    A++AE+ RSG+ +V  GQ EAA ALGL 
Sbjct: 75  GMPELG--------VVINAFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLN 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LPQA+R++ P L +  L L+K +SL   +   +L+  G  +   T QA+ +
Sbjct: 127 KVDRLRRVVLPQAVRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTV 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   IY ++  ++A    R   ++
Sbjct: 187 YTMVGAIYFAMCSVLAHLFRRSEKRL 212



 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 37/65 (56%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T +  G + T  L F   + A  +G LV   RLS +++++   R+Y+++ R  P L+ 
Sbjct: 9   YLTPLAEGTMWTLALFFCSAVLAVALGLLVCLCRLSKSRVLSRGARLYIDIIRGTPLLLQ 68

Query: 145 IFFLY 149
           +F++Y
Sbjct: 69  LFYIY 73


>gi|262155888|ref|ZP_06029010.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262030340|gb|EEY48982.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
          Length = 188

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 16/191 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R F       L  LYIS F   G P LV L  L Y L    P+L   +          F 
Sbjct: 9   RVFKVPVLDPLSQLYISFFR--GTPLLVQLFLLYYGLPQVFPLLVGLD---------AFS 57

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L+ + AA++AE +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L
Sbjct: 58  AAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSL 117

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +++++K++SLA  +G A++++      + + +  E  L    IY     ++ L + R
Sbjct: 118 MNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYW----VVVLVLTR 173

Query: 388 LNAKIALKEKK 398
           L +    K  K
Sbjct: 174 LQSWAEQKLNK 184


>gi|227326270|ref|ZP_03830294.1| putative ABC transporter, permease [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 293

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 3/135 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL   + T  ++LPQA+RSI+
Sbjct: 140 QFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGSRRTVRIILPQALRSIL 199

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMI 381
           P   ++ ++L K +S+   +   +L      I N+T Q I +++   IW  +  ++  ++
Sbjct: 200 PTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWYLLITTVLSVV 259

Query: 382 ALFMNRLNAKIALKE 396
             ++ R  ++ A++E
Sbjct: 260 QYYVERYVSRGAVRE 274


>gi|163734791|ref|ZP_02142229.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
 gi|161391896|gb|EDQ16227.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
          Length = 218

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 72/129 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F S  IA   + AA+ +EI+R+G+ +V +GQ+ A  + GL + +  R V+LPQA R++I
Sbjct: 89  SFYSALIAFVLFEAAYYSEIMRAGIQSVKQGQVHAGQSTGLNYWQIQRYVVLPQAFRNMI 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q + L +++SL   V   D ++    +    G+ +E+ L    +Y  +    ++ 
Sbjct: 149 PILVTQCIILFQDTSLVFVVSLRDFMTASSIVARTEGRLVEMYLFAAVVYFVICFSGSML 208

Query: 385 MNRLNAKIA 393
           +  L ++++
Sbjct: 209 VRSLKSRMS 217



 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   + WL F  +I   ++GTL+   RLS  K +A +   YV + R++P ++VIF+ +
Sbjct: 19  GLQLSLWLTFLSIIGGIVLGTLLALARLSGIKPLAMVAATYVNLIRSVPLILVIFWFF 76


>gi|158423695|ref|YP_001524987.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330584|dbj|BAF88069.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 225

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 11/166 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G+P LV++   + ++F  P  G    I  S      + L +  SCY    I E  R+
Sbjct: 68  LVRGVPILVIL---FYIYFVMPDFG----IDLSAFQAGVIGLALTYSCY----IGETFRA 116

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV RGQ+EAA ++G+      R V+LPQA + ++PP  +  + LLK+SS    +  A
Sbjct: 117 GIEAVDRGQVEAAKSIGMKRPLMMRRVILPQAFKIVLPPYGNNIVMLLKDSSQVSVISVA 176

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L   G  + + T   + I  +   +YL L++ + + M +L  ++ 
Sbjct: 177 ELTMQGKMLASSTFNNMTIFTLVALLYLCLTVPLNIVMRQLELRLG 222


>gi|119960817|ref|YP_948500.1| glutamate permease [Arthrobacter aurescens TC1]
 gi|119947676|gb|ABM06587.1| Glutamate permease [Arthrobacter aurescens TC1]
          Length = 289

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 4/135 (2%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           G AL LL IS      +PT V++     +    PV+    F+     + +F ++ + L  
Sbjct: 87  GIALCLLRISLIPWIRIPTQVVLEFLRGM----PVVLMMLFVLLVFATGQFQAVVVGLVL 142

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y AA  AEI+R+G+ ++P+GQ EA +A+GL   ++   +  PQA+R ++P L +Q + LL
Sbjct: 143 YNAAIFAEILRAGIQSLPKGQREAGLAIGLRSFQSRMSIEFPQAVRRMLPSLVAQLVVLL 202

Query: 336 KNSSLAVAVGFADLV 350
           K++SL   VG+ +L+
Sbjct: 203 KDTSLGYIVGYEELL 217


>gi|295698937|ref|YP_003606830.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438150|gb|ADG17319.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 602

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 4/129 (3%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G+ +V  GQ+EAA ALGL   +  R ++LPQAMR
Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGIQSVDHGQLEAAAALGLPRERQARRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 222 AIVPTAFNDLIALAKGSSMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNR 387
             I +++ R
Sbjct: 282 SAIQVYVER 290


>gi|259907962|ref|YP_002648318.1| Putative ABC transporter, permease [Erwinia pyrifoliae Ep1/96]
 gi|224963584|emb|CAX55076.1| Putative ABC transporter, permease [Erwinia pyrifoliae Ep1/96]
          Length = 289

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 74/129 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+   AA+ AEIVR G+  V  GQ EAA ALGL   + T  ++LPQA+R+II
Sbjct: 136 QFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIILPQALRAII 195

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      + N+T Q I ++++    YL ++ ++++ 
Sbjct: 196 PGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLLITTLLSVV 255

Query: 385 MNRLNAKIA 393
            + +   +A
Sbjct: 256 QHYVERWLA 264


>gi|222083300|ref|YP_002542703.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221738680|gb|ACM39518.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 235

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 73/120 (60%), Gaps = 7/120 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+ L + ++F  P L  +   G       F ++ + L+ +  A++ EI+++G++++PRGQ
Sbjct: 73  LVMLIFWVYFLLPKLTGYAITG-------FTTMLVTLTLFQGAYMGEILKAGIMSLPRGQ 125

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ++GL++ +A   V+LPQ + ++ P + SQ +  +K++SL   +G  +L+  G  +
Sbjct: 126 IEAARSIGLSYSQAQTDVILPQVLYNMAPSIISQLVATIKDTSLGYIIGVQELMYAGSQV 185


>gi|171743321|ref|ZP_02919128.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC
           27678]
 gi|306823266|ref|ZP_07456642.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309801894|ref|ZP_07696009.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171278935|gb|EDT46596.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC
           27678]
 gi|304553898|gb|EFM41809.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308221450|gb|EFO77747.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 514

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 23/229 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           FL     S P L +     +F  V SF + ++L + A  L R    +    +  +Y++ F
Sbjct: 301 FLGLAKQSLPALMIGLKNTLFITVISFAIALLLGV-AFGLMRVGENRVASGVSKVYVAIF 359

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAE 283
              G P LV     +  +F  P L     IG S      ++++IA    LS  + A++AE
Sbjct: 360 R--GTPILVW---AFFFYFGVPQL-----IGHS------VNIWIAGALTLSLNSGAYLAE 403

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  + AV  GQME A +LGL  R++   V+LPQA +  +P + +Q + ++K+SSL +A
Sbjct: 404 IVRGAIQAVDPGQMEGARSLGLNRRQSMARVILPQASKIAMPSVINQLVIMIKDSSLLLA 463

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +GF +L+     +     +  E +L+   IY     M+    N ++ K+
Sbjct: 464 IGFGELLYQAQQLYAANFRVTETLLLVGVIYFVAITMLTWLANIVDRKV 512



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+++G  NT ++       A ++G   G  R+  N++ + + +VYV +FR  P LV  FF
Sbjct: 311 ALMIGLKNTLFITVISFAIALLLGVAFGLMRVGENRVASGVSKVYVAIFRGTPILVWAFF 370

Query: 148 LY 149
            Y
Sbjct: 371 FY 372


>gi|319792873|ref|YP_004154513.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315595336|gb|ADU36402.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 217

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 18/212 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A  FV   +LG++++L  T  S      +     +++I  F   G P L+ + L 
Sbjct: 19  TLALSAIAFVGGAILGLIIALMRTSDSTWARNAS-----MVFIQVFQ--GTPLLLQLFLI 71

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
               F  PVLG         ++P +++  +AL   +AAF+ EI R  + A+PRGQ EAA 
Sbjct: 72  ---FFGAPVLGL-------DINP-WIAAGVALILNSAAFLGEIWRGCIEAIPRGQWEAAE 120

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           AL L +    R V+LPQA +  + P     + ++K +SLA  +GF ++   G  I N T 
Sbjct: 121 ALSLKYGARMRDVVLPQAFKIALAPTVGYLVQIIKGTSLAAIIGFTEITRAGQIINNATF 180

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           Q + +  +   IY  +   ++L   R+  K A
Sbjct: 181 QPLIVFSVVAAIYFVICWPLSLLAARMERKRA 212


>gi|284802788|ref|YP_003414653.1| hypothetical protein LM5578_2545 [Listeria monocytogenes 08-5578]
 gi|284995930|ref|YP_003417698.1| hypothetical protein LM5923_2495 [Listeria monocytogenes 08-5923]
 gi|293596749|ref|ZP_05264035.2| amino acid ABC transporter [Listeria monocytogenes J2818]
 gi|284058350|gb|ADB69291.1| hypothetical protein LM5578_2545 [Listeria monocytogenes 08-5578]
 gi|284061397|gb|ADB72336.1| hypothetical protein LM5923_2495 [Listeria monocytogenes 08-5923]
 gi|293592041|gb|EFG00376.1| amino acid ABC transporter [Listeria monocytogenes J2818]
          Length = 236

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 32  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 81

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 82  LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 141

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 142 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 201

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 202 AFIGAALIYWFLTILIEAINYILEKNIA 229


>gi|253688538|ref|YP_003017728.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755116|gb|ACT13192.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 314

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 14/214 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS V G  L+L   RLS  +   T   L  LYI  F    L  +++I   +   +D+  L
Sbjct: 87  FSIVFGTALAL--ARLSPSYLLST---LSWLYIWLFRSLPLILVLIILYNFSYLYDELAL 141

Query: 252 G----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           G       F+   T+    +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL
Sbjct: 142 GIPFTSVVFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGL 201

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              + T  ++LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I 
Sbjct: 202 PGGRRTVRIILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIP 261

Query: 366 IIL---IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++   IW  +  ++  +I  ++ R  ++ A++E
Sbjct: 262 LLMVATIWYLLITTVLSVIQYYVERYVSRGAVRE 295


>gi|239928549|ref|ZP_04685502.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
 gi|291436874|ref|ZP_06576264.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
 gi|291339769|gb|EFE66725.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
          Length = 221

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YT+AF+ E +RSG+  VP GQ EAA A+GL+  +   LV+LPQA RS + PL + 
Sbjct: 96  LGLILYTSAFVCEAIRSGINTVPVGQAEAARAIGLSFNQVLGLVVLPQAFRSSVGPLANV 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+KN+++A A+G A+   +   +I    Q + I  +  F ++ L++   LF+  +  
Sbjct: 156 LIALIKNTTVAAAIGVAEAALLMKEMIENEAQLLLISAVIAFGFVVLTLPTGLFLGWVGK 215

Query: 391 KIALKE 396
           K+A+K 
Sbjct: 216 KVAVKR 221


>gi|218507341|ref|ZP_03505219.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 157

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 74/128 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++   ++ + +A++ EI RS ++A+P+GQ EAA ALGL +R     V+LPQA+R  +P
Sbjct: 27  WIAVAAGVTLHASAYLGEIWRSTIMALPKGQDEAAKALGLGYRTRIIYVILPQALRISLP 86

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  +GF +L   G  + N T Q + +  +   +Y +L   ++ F 
Sbjct: 87  STVGFLVQLVKGTSLAAIIGFTELTRAGQIVSNATYQPLIVFGLVGALYFALCWPLSHFS 146

Query: 386 NRLNAKIA 393
            +L  + A
Sbjct: 147 FQLEKRFA 154


>gi|126731769|ref|ZP_01747573.1| probable ABC transporter permease protein [Sagittula stellata E-37]
 gi|126707596|gb|EBA06658.1| probable ABC transporter permease protein [Sagittula stellata E-37]
          Length = 364

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 60/95 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + + ++ + A + AE++R GL A+P GQ EAA +L LT+ + TR ++LPQA+R  +
Sbjct: 229 KLLRITVGIAVFFACYQAEVIRGGLQAIPTGQYEAADSLNLTYWQTTRRIILPQALRISL 288

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           P +T+  +  +KN+S  + +G  D+++    ++  
Sbjct: 289 PAITNHIIAAMKNTSFVIIIGLFDILTATTAVMQD 323


>gi|308188313|ref|YP_003932444.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Pantoea vagans C9-1]
 gi|308058823|gb|ADO10995.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Pantoea vagans C9-1]
          Length = 366

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 220 FMSEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQMLVI 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++  IP L +  + L K++SL + +G  DL S
Sbjct: 280 LPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFS 315


>gi|307729487|ref|YP_003906711.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307584022|gb|ADN57420.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 219

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  + G VL+L         H +T   L  +Y+S  ++ G P LV I   + +++  P  
Sbjct: 31  FGLIAGAVLALMGVS-----HSRTLNRLARIYVS--VMRGTPLLVQI---FVIYYGLPSF 80

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G        ++ P    + IALS   AA+++E +R  ++ + +GQ  AA +LGL+ R+  
Sbjct: 81  G-------ISLEPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQTL 132

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L   
Sbjct: 133 RYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAA 192

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            +Y  L  ++ L       ++AL  + 
Sbjct: 193 AVYWVLCQILELLQRWYERRLALPSRH 219


>gi|251791417|ref|YP_003006138.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540038|gb|ACT08659.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 364

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + +   LV+LPQA++ +IP L +  + L 
Sbjct: 238 FQSAYVAEVVRGGLQALPKGQYEAAQSLALGYWRMQGLVILPQALKMVIPGLVNTIIALF 297

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 298 KDTSLVIIIGLFDLFS 313


>gi|256824980|ref|YP_003148940.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
 gi|256688373|gb|ACV06175.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
          Length = 245

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 31/215 (14%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLHF 246
           F   FVL +VL L           K     P  + +T    L  GLP L++I     + F
Sbjct: 46  FTGGFVLAVVLVLM----------KLAPVAPFRWFATAYIELFRGLPALLVILF---MGF 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+   +   GG TV    + L +    Y    +AE +R+G+ AVP GQ+EAA +LG+T
Sbjct: 93  GIPIATGWTPPGG-TVGAGLVGLMLVAGAY----MAETLRAGIQAVPSGQVEAARSLGMT 147

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIIN---Q 359
             +    V  PQA+R ++PPLT++ + L+K++SL   +GF     +L +     +N    
Sbjct: 148 PAQTMASVTFPQALRIVVPPLTNELVILIKDTSLLFVLGFMTHQKELTTAARDFMNAGPS 207

Query: 360 TGQAIEII---LIWMFIYLSLSIMIALFMNRLNAK 391
            G +  ++   L+++ I L L+ ++A    R N +
Sbjct: 208 AGTSTSLVFAALLYLAITLPLTQVVAWLERRQNRR 242


>gi|254523655|ref|ZP_05135710.1| ABC transporter, nucleotide binding/ATPase protein
           [Stenotrophomonas sp. SKA14]
 gi|219721246|gb|EED39771.1| ABC transporter, nucleotide binding/ATPase protein
           [Stenotrophomonas sp. SKA14]
          Length = 581

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   AAF AE++R G+++V  GQ EAA ALGL   +  R ++LPQAMRSI+P
Sbjct: 161 FTAAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRRIILPQAMRSILP 220

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  + L K++S+   +   +L      I  +  + + ++++    YL +  +++L  
Sbjct: 221 AAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLLQ 280

Query: 386 NRLNAKIA 393
            R+  + A
Sbjct: 281 RRVEQRFA 288


>gi|70726105|ref|YP_253019.1| hypothetical protein SH1104 [Staphylococcus haemolyticus JCSC1435]
 gi|68446829|dbj|BAE04413.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 484

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 16/130 (12%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   ++A+IAEI+R+G+ AV +GQ EAA  LGL + K    ++LPQA ++I+P L ++
Sbjct: 359 IALVINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYSKTMIHIILPQAFKNILPALGNE 418

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQAIE-------IILIWMFIYLS--LSIM 380
           ++ L+K SS+   +G      VG  + N Q  Q I        II   M+  L+  LS +
Sbjct: 419 FVTLIKESSIISTIG------VGEIMFNAQVVQGISFDPFTPLIIAACMYFVLTFLLSRL 472

Query: 381 IALFMNRLNA 390
           ++L   RL A
Sbjct: 473 MSLIEGRLKA 482



 Score = 42.7 bits (99), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y T  L G  NT  ++  G++   IIG+ +   +LS  K+++    +Y+E  R  P L
Sbjct: 274 QKYGTFFLKGLQNTIIISLIGVVCGAIIGSFIALAKLSKFKIISLPATIYIEFLRGTPML 333

Query: 143 VVIFFLY 149
           V +F ++
Sbjct: 334 VQVFIVF 340


>gi|113475661|ref|YP_721722.1| polar amino acid ABC transporter inner membrane subunit
           [Trichodesmium erythraeum IMS101]
 gi|110166709|gb|ABG51249.1| polar amino acid ABC transporter, inner membrane subunit
           [Trichodesmium erythraeum IMS101]
          Length = 403

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 60/89 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ ++AA++AE VR GL +V RGQ EAA ALGL    +  L++LPQA++  IP +  Q
Sbjct: 275 LGLTLFSAAYLAENVRGGLQSVLRGQSEAAKALGLNTPLSLGLIVLPQALKVAIPSIVGQ 334

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++L ++++L   VG  +L+ +  +I+ Q
Sbjct: 335 FISLFQDTTLLSIVGLVELLGISRSILAQ 363


>gi|289168138|ref|YP_003446407.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
 gi|288907705|emb|CBJ22542.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
          Length = 213

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 23/198 (11%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLY 270
           +G ++ L   +  LIF +P  VLIA   Q+H+ KP+    N     + G+ +  + + +Y
Sbjct: 13  SGASMTLQVFALVLIFSIPLGVLIAFALQVHW-KPLHHLINIYIWIMRGTPLLLQLIFIY 71

Query: 271 -----------------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                            IA     AA+ AEI R G+  +P+GQ EAA  L        R 
Sbjct: 72  YVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFNSFDTVRY 131

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    + + L+   I
Sbjct: 132 IILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLVGA-I 190

Query: 374 YLSLSIMIALFMNRLNAK 391
           YL L  ++ +   ++  K
Sbjct: 191 YLILIGIVTILAKKVEKK 208


>gi|254391811|ref|ZP_05007006.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|294815491|ref|ZP_06774134.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|326443842|ref|ZP_08218576.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197705493|gb|EDY51305.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|294328090|gb|EFG09733.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
          Length = 224

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 51/78 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YT  F+ E +RSG+  VP GQ EAA ALGL+  +   L++LPQA RS++ PL + 
Sbjct: 98  LGLVAYTGTFVCEALRSGINTVPVGQAEAARALGLSFLQVLTLIILPQAFRSVVAPLANV 157

Query: 331 YLNLLKNSSLAVAVGFAD 348
            + L KN+++A A+G  +
Sbjct: 158 LIALTKNTTVAAAIGVTE 175


>gi|313607195|gb|EFR83666.1| L-cystine transport system permease protein TcyM [Listeria
           monocytogenes FSL F2-208]
          Length = 235

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|271498818|ref|YP_003331843.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270342373|gb|ACZ75138.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 362

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + +   LV+LPQA++ +IP L +  + L 
Sbjct: 236 FQSAYVAEVVRGGLQALPKGQYEAAQSLALGYWRMQGLVILPQALKMVIPGLVNTIIALF 295

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 296 KDTSLVIIIGLFDLFS 311


>gi|255027829|ref|ZP_05299815.1| hypothetical protein LmonocytFSL_18331 [Listeria monocytogenes FSL
           J2-003]
          Length = 235

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G   +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGVXANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|119387647|ref|YP_918681.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378222|gb|ABL72985.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 214

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            A + + +FVLG  + L    + R    +  + +   YI   ++ G P LV++ L +   
Sbjct: 17  TAGLSLIAFVLGGAVGLLIAVM-RVSANRVLRGIAFTYIQ--IVQGTPLLVMMMLAF--- 70

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F   +LG F+      ++P F +   A+  Y++A+  EI R G++AVP+ Q EAA  L L
Sbjct: 71  FGLSILG-FD------LTP-FAAASFAMVIYSSAYFGEIWRGGILAVPKTQWEAAECLAL 122

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +   LV++PQ +R   PP     + ++KN+SLA  +G A+L      I N T Q   
Sbjct: 123 HPVQRFWLVIIPQGLRISTPPTVGFMVQIVKNTSLASVIGVAELTYTSKLINNSTFQPFI 182

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I  +   +Y  +   +A +  +L  K+ +  +
Sbjct: 183 IFSVVAVLYFCMCYPLAWWSRKLEDKLNVAHR 214


>gi|167568073|ref|ZP_02360989.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia oklahomensis EO147]
 gi|167574432|ref|ZP_02367306.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia oklahomensis C6786]
          Length = 220

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 18/218 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++     FV S VLG+ L+L     +R         + +       I GLP +V +  
Sbjct: 21  VTVEITLCAFVLSSVLGLGLALMRVSSNRALSHAAAAVVNV-------IRGLPIIVQL-- 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P LG    +  S     F+ L IA S Y A    E  R+G+ A+ RGQ+EAA
Sbjct: 72  -FYIYFVLPDLG----VQLSAFQAGFIGLGIAYSAYQA----ENFRAGIEAIDRGQIEAA 122

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G+      R V+LPQA R  +PP  +  + +LK+SSLA  +  A++   G  I + T
Sbjct: 123 QSIGMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASST 182

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + +  +   +YL+LS+ +   + R+  ++ +K K+
Sbjct: 183 FQNMTVYTLVALLYLALSLPLVYGLRRIERRLGIKGKR 220


>gi|149203335|ref|ZP_01880305.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. TM1035]
 gi|149143168|gb|EDM31207.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. TM1035]
          Length = 429

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 58/82 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ +++A+IAE++R GL A+PRGQ EAA +LGL + +A +L++LPQA++  IP + + 
Sbjct: 299 IMITMFSSAYIAEVIRGGLAALPRGQYEAADSLGLDYAQAMQLIILPQALKISIPGIVNV 358

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
            + L K+++L   +   D+V +
Sbjct: 359 AVGLFKDTTLVSVISMFDIVGM 380


>gi|28378896|ref|NP_785788.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254557101|ref|YP_003063518.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300769711|ref|ZP_07079594.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308181097|ref|YP_003925225.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28271733|emb|CAD64639.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254046028|gb|ACT62821.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300492754|gb|EFK27939.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046588|gb|ADN99131.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 213

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 12/161 (7%)

Query: 240 LKYQLHF------DKPVLGQ--FNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSG 288
           L++ LHF        P+L Q  F F G   +   F   Y AL  +    AA+ AEI R G
Sbjct: 47  LQWLLHFYVWLMRGTPLLLQLIFVFYGLPLIGIVFPRYYAALFAFILNYAAYFAEIFRGG 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++  GQ E+A  L L++ +  R +++PQ ++ ++P + ++ +NL+K+SSL   +G  D
Sbjct: 107 LQSIDNGQYESARVLRLSYWQTIRKIVIPQVIKIVLPSVGNEVINLVKDSSLVYVIGLGD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           L+  G     +    + ++L+ + IYL+L+ +    + R+ 
Sbjct: 167 LLRAGNVATARDVTLVPLVLVGI-IYLALTAVTTFVLGRIE 206


>gi|307129009|ref|YP_003881025.1| membrane protein of an ABC superfamily putative amino-acid
           transporter [Dickeya dadantii 3937]
 gi|306526538|gb|ADM96468.1| membrane component of an ABC superfamily predicted amino-acid
           transporter [Dickeya dadantii 3937]
          Length = 364

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + +   LV+LPQA++ +IP L +  + L 
Sbjct: 238 FQSAYVAEVVRGGLQALPKGQYEAAQSLALGYWRMQGLVILPQALKMVIPGLVNTIIALF 297

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 298 KDTSLVIIIGLFDLFS 313


>gi|300313888|ref|YP_003777980.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076673|gb|ADJ66072.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 217

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+L+ + Y   F   V G         V P  ++  +A+  YT+A++ +I R  + 
Sbjct: 62  GIPLLILLFIVY---FGLSVYG--------LVLPALVAAGLAMMIYTSAYLGDIWRGCVE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PR Q EA+  L LT  +  RLV++PQA R  +PP     + L+K +SLA  +GF +L 
Sbjct: 111 AMPRPQWEASECLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELT 170

Query: 351 SVGGTIINQTGQAIEIILI 369
             G  I N   Q   + L+
Sbjct: 171 RAGQIINNSIFQPFLVFLL 189


>gi|255093160|ref|ZP_05322638.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
          Length = 223

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS ++G +++L     S ++  K    +  +Y+S F   G P   L+   + L+F    
Sbjct: 31  VFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--GTP---LMPQLFFLYFGLAY 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F       + P F +  I LS    A+++E +R+ ++++ +GQ+EAA  +GLT+ + 
Sbjct: 81  MNDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILSIDKGQIEAAYVMGLTNLQT 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            + +++PQA+R  +P L + +++L+K SS+A  VG  D++
Sbjct: 136 MKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169
           Y         V ++ P+   SIVL   M
Sbjct: 75  YFGLAYMNDFVKNMDPVFATSIVLSLNM 102


>gi|222081580|ref|YP_002540944.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726259|gb|ACM29348.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 216

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 8/113 (7%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L++  P   QF  +    +SP +++  + L  Y A   AEI R+G  AVP+G+ EAA  L
Sbjct: 71  LYYGGP---QFGLV----LSP-YVAGIVGLGLYGAGPFAEIFRAGFNAVPKGECEAAAML 122

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           GLT  +    V LPQAMR  +PP   Q +NL+K S++   +   +L  V GTI
Sbjct: 123 GLTPGQTFLYVELPQAMRLTLPPSIGQAINLVKESAVLSVITLGELTKVAGTI 175


>gi|229816602|ref|ZP_04446900.1| hypothetical protein COLINT_03659 [Collinsella intestinalis DSM
           13280]
 gi|229807808|gb|EEP43612.1| hypothetical protein COLINT_03659 [Collinsella intestinalis DSM
           13280]
          Length = 212

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 3/126 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A + +T+A +AEIVR+GL AVP GQ EAA + G       R ++LPQ  R I P L  Q
Sbjct: 85  LAFTLFTSAVMAEIVRAGLNAVPAGQFEAAQSQGFGFFATMRYIILPQTFRIITPALFGQ 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNR 387
              ++K+SS    +  A+ +     ++       ++++++ F+   Y +L+  I+L + R
Sbjct: 145 CTTVIKDSSYLSGINVAEFMYTTNVVMAHAVSLDQVLMLYGFVFALYFALNFGISLLVRR 204

Query: 388 LNAKIA 393
              K+A
Sbjct: 205 YQRKVA 210



 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL GF+ T  ++   +I + ++GT++   +    +   W+   Y+E+FR  P L+ I F+
Sbjct: 12  ILGGFIKTIEISVLSIICSVVVGTVLALVKSYGPRPFRWLVSAYIELFRCTPNLLWILFI 71

Query: 149 YKSV 152
           Y +V
Sbjct: 72  YFTV 75


>gi|167589201|ref|ZP_02381589.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 300

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 79/137 (57%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+ + AAF AE++R G+++V +GQ+EAA ALGL     T  ++LPQAMR
Sbjct: 165 ISP-FLAAVLGLTLHHAAFSAEVIRGGILSVDQGQLEAAAALGLPRAHQTTRIVLPQAMR 223

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K +S+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 224 AILPTAFNDLIMLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVL 283

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 284 SAIQVQVERHYARGALR 300


>gi|186473669|ref|YP_001861011.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196001|gb|ACC73965.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 218

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 4/141 (2%)

Query: 259 GSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           GS + P   F+S  I L   TAA +AEI R  L AVP GQ EAA ALGL        VL+
Sbjct: 77  GSDLIPLSPFVSAVIGLGLITAANVAEIYRGALKAVPAGQYEAARALGLPALLQYHDVLI 136

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ  R  +P L +  + LLK++++A  +G  DL      +  +T + IE+   +  +Y  
Sbjct: 137 PQIFRLALPSLATYAIGLLKDTAVASTIGVHDLAFSAYRVSQETFRGIEVYAAFGLVYFL 196

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S+ +A     L+ +  L+E+
Sbjct: 197 ISLAMAYATRGLDRR--LRER 215


>gi|331659559|ref|ZP_08360501.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA206]
 gi|331054141|gb|EGI26170.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA206]
          Length = 367

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 53/76 (69%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV++PQA++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVIMPQALKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|326315960|ref|YP_004233632.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323372796|gb|ADX45065.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 220

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 32/225 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL----LYISTFL--IFGLPT 234
           +T+      F+ S  LG++L+L             GK  P+    L  STF+  I GLP 
Sbjct: 21  VTVQVTVLAFLLSSALGLILAL-------------GKLSPVRAVSLAASTFINVIRGLPI 67

Query: 235 LVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           +V +   + ++F  P  G Q            F +  I L    +A+ AE  R+G+ AV 
Sbjct: 68  IVQL---FYIYFVLPDFGVQLT---------AFQAGVIGLGIAYSAYQAENFRAGIEAVD 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA+A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   G
Sbjct: 116 PGQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAG 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I + T Q + +  +   +YL++S+ +   + RL  ++    ++
Sbjct: 176 QLIASSTFQNMTVYTLVALLYLAMSLPLVACLRRLERRLGAGSRR 220


>gi|13474098|ref|NP_105666.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14024850|dbj|BAB51452.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 215

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 16/161 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R+S+H   K  + L   YI+ F   G P L+ + L +   F  P+LG         + P 
Sbjct: 42  RISKH---KWSRRLASGYIALFQ--GTPLLMQLFLMF---FGLPMLGL-------RIEP- 85

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + +  + L+ + +A++AEI RSG+ A+PRGQ +A  +LGL + +  RL++LPQA      
Sbjct: 86  WTAAVLGLTFFASAYLAEIWRSGVDALPRGQWDAGASLGLHYLQELRLIILPQAFSITRA 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           P     + L+K+++L   +GF +LV     I N T +  ++
Sbjct: 146 PTVGFLVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKV 186


>gi|303240911|ref|ZP_07327422.1| polar amino acid ABC transporter, inner membrane subunit
           [Acetivibrio cellulolyticus CD2]
 gi|302591497|gb|EFL61234.1| polar amino acid ABC transporter, inner membrane subunit
           [Acetivibrio cellulolyticus CD2]
          Length = 210

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 17/194 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+  LG+++S       R    +   A+  +YIS  ++ G P ++ + + Y        
Sbjct: 23  IFALPLGLIISF-----GRRAKNRIISAIAGIYIS--IMRGTPLMLQLVVVY-------- 67

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G +   GG      F +  IAL    AA+ AEI R G+ ++P+GQ EA   LG T  + 
Sbjct: 68  FGPYYVFGGKI--DRFPAAVIALVLNYAAYFAEIFRGGIDSIPKGQYEAGEVLGFTKVQV 125

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQ ++ I+P ++++ + L+K+++L  A+G A++       + + G    + +  
Sbjct: 126 FFKIVLPQVVKRILPAISNEVITLVKDTALVTAIGVAEMFKAANNEMTRIGSMQPVFVAG 185

Query: 371 MFIYLSLSIMIALF 384
           +F Y+   I+  LF
Sbjct: 186 VFYYVMNLIIAKLF 199


>gi|330970030|gb|EGH70096.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aceris str. M302273PT]
          Length = 329

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249
           FS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D  
Sbjct: 97  FSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 149

Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           VLG    Q  F   STV    +F    + LS   +A+ AEI+R GLI V  GQ EAA AL
Sbjct: 150 VLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAAL 209

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   
Sbjct: 210 GLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 269

Query: 364 IEIILIWMFIYL 375
           I ++++    YL
Sbjct: 270 IPLLIVATVWYL 281


>gi|304396997|ref|ZP_07378877.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355793|gb|EFM20160.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 366

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 52/76 (68%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++  IP L +  + L 
Sbjct: 240 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQMLVILPQALKLTIPGLVNTIIALF 299

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 300 KDTSLVIIIGLFDLFS 315


>gi|262041041|ref|ZP_06014260.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259041599|gb|EEW42651.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 238

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 20/223 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFHE----KTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V + V+G+VL+ LFA   S  +       TG     + LP + +  F+ FG   L+L   
Sbjct: 19  VCALVIGLVLAMLFAVLESVKWRPVAWLATGIVTILRGLPEILVVLFIYFGSSQLLLTLS 78

Query: 239 -ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                 L F + PV  Q  NF     VSP F+   IALS   AA+ ++ +R  L AVP+G
Sbjct: 79  DGFTIPLGFTQIPVQMQIENF----DVSP-FLCGAIALSLLYAAYASQTLRGALKAVPQG 133

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +
Sbjct: 134 QWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKS 193

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I  +T +     +I   IYL ++++    + R++ +    E+K
Sbjct: 194 IATRTQEPFNWYIIAAAIYLVITLLSQYILKRIDQRATRFERK 236


>gi|227114002|ref|ZP_03827658.1| putative amino-acid transport system permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
 gi|253686636|ref|YP_003015826.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753214|gb|ACT11290.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 221

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 18/200 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+F   LGI+++L      R +  K  K L   Y+  ++I G P LV + L +       
Sbjct: 31  FIFGLALGIIIALV-----RLYGPKPLKWLGDFYV--WVIRGTPLLVQLFLIF------- 76

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               +           F +  I  +    A+ +EIVR  +++VP+GQ  AA +LG+  R+
Sbjct: 77  ----YGLPSAGITLDAFPAALIGFTISVGAYSSEIVRGAILSVPKGQWNAAYSLGMNGRQ 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+ PQ++   +PPL++ +++L+K++SLA  +   ++      I++ T + + + + 
Sbjct: 133 AIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSVTYEPLILYVE 192

Query: 370 WMFIYLSLSIMIALFMNRLN 389
              IYL  S +++    +L 
Sbjct: 193 AALIYLMFSTVLSQLQVKLE 212


>gi|92115412|ref|YP_575340.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91798502|gb|ABE60641.1| amino acid ABC transporter membrane protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 223

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 68/115 (59%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+I+EIVR G+ ++ +GQ EA ++LGL+     R ++ PQA+R +IP L +Q +  +K
Sbjct: 104 AGAYISEIVRGGVQSIEKGQREAGLSLGLSRIDTFRYIIWPQALRRMIPALGNQGIVSIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  +LV  G   I  T  A+E+  +   +YL +++ ++  +  L  K
Sbjct: 164 DTSLFSVIGVGELVRQGQVYIATTFTALEVYFMVAMLYLVITLSLSTALRLLERK 218



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 38/71 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++F G+    +IG + G  R++  +++ W    Y+EVFR  P LV + F+
Sbjct: 19  LLTGIPWTLLISFGGLAIGFVIGIIFGLLRINPLRVLRWPAIAYIEVFRGTPVLVQVLFI 78

Query: 149 YKSVLSVLPIP 159
           +  +  +L  P
Sbjct: 79  FYGLPQLLGGP 89


>gi|66046122|ref|YP_235963.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256829|gb|AAY37925.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 329

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249
           FS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D  
Sbjct: 97  FSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 149

Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           VLG    Q  F   STV    +F    + LS   +A+ AEI+R GLI V  GQ EAA AL
Sbjct: 150 VLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAAL 209

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   
Sbjct: 210 GLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 269

Query: 364 IEIILIWMFIYL 375
           I ++++    YL
Sbjct: 270 IPLLIVATVWYL 281


>gi|288905474|ref|YP_003430696.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|306831557|ref|ZP_07464715.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978464|ref|YP_004288180.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288732200|emb|CBI13765.1| putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
 gi|304426342|gb|EFM29456.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178392|emb|CBZ48436.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 230

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 59/89 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++   AA I+E+ +S   A+P+GQ+EA +++GLT  +    +LLPQA R  +P +T+ 
Sbjct: 102 LAMTLLFAASISEVFKSSYQALPKGQLEAGLSIGLTDYQTFVRILLPQAFRIALPNITTA 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +NLLK+ +LA  +G  DL+  G  +I++
Sbjct: 162 IINLLKDIALAYTIGLVDLMGAGNLVISR 190


>gi|116617768|ref|YP_818139.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096615|gb|ABJ61766.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 490

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 72/117 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +A+   +AA++AEI+RSG+ +V  GQ EA+ +LGL+  K  R V+LPQA+++I+P
Sbjct: 359 FAAGALAMGLNSAAYVAEIIRSGINSVDFGQTEASRSLGLSKGKTMRYVILPQAVKNILP 418

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            L ++++ ++K  S+   +G  +L+   G +   + +    ++I   IY  L+  I+
Sbjct: 419 ALGNEFVTIIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLVIASLIYFVLTFGIS 475


>gi|148652957|ref|YP_001280050.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148572041|gb|ABQ94100.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 245

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 17/208 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+    + +V++L      +    K    L  +Y+S   I G P LV +   + + +  P
Sbjct: 50  FIIGMAIALVVALIRVVPRQALWHKIAYRLARIYVSA--IRGTPMLVQL---FIIFYGLP 104

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G         +   F +  IA S    A+ +E VR+ ++++P+GQ EA   +GLT+ +
Sbjct: 105 SVG--------VMLEPFPAAIIAFSLNIGAYASETVRASILSIPKGQWEAGATVGLTYLQ 156

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----E 365
           + R V+LPQA+R  +PPL++ +++L+K++SLA  +   ++      I  +  + +    E
Sbjct: 157 SFRHVILPQALRVSVPPLSNTFISLVKDTSLASLILVTEMFKQAQIITARNYEFMLVYTE 216

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             LI+  I L+LS +      RL+  +A
Sbjct: 217 AALIYWVICLALSAVQGRLETRLDRYVA 244


>gi|92112257|ref|YP_572185.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795347|gb|ABE57486.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 369

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 34/216 (15%)

Query: 149 YKSVLSVLPIPDHSIVLPFG-----MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL- 202
           + +V++V+  P  + VL  G     +++  R      LT+       V S  +GIVL+L 
Sbjct: 127 WAAVIAVIGFPIAAYVLLLGGHFGLIYVPTREWGGLMLTLTVATIGIVGSLPIGIVLALG 186

Query: 203 ------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
                 F   +S  F E   + +PL+ +       LP  V      Q+ FDK        
Sbjct: 187 RRSNLPFVRAVSVVFIEFW-RGVPLITVLFMASVMLPLFV----PTQVEFDK-------- 233

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                     +   + +  + +A++AE+VR GL A+P GQ EA  ALGL + +   L++L
Sbjct: 234 ---------LLRALVGIMLFWSAYMAEVVRGGLQAIPSGQDEAGKALGLGYWQRMGLIVL 284

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PQA++ +IP + + ++ L K++SL + +G  DL+++
Sbjct: 285 PQALKLVIPGIVNTFIALFKDTSLVLIIGLFDLLAI 320


>gi|52080938|ref|YP_079729.1| high affinity arginine transport system permease [Bacillus
           licheniformis ATCC 14580]
 gi|52786313|ref|YP_092142.1| YqiY [Bacillus licheniformis ATCC 14580]
 gi|319645106|ref|ZP_07999339.1| YqiY protein [Bacillus sp. BT1B_CT2]
 gi|52004149|gb|AAU24091.1| high affinity arginine transport system permease protein [Bacillus
           licheniformis ATCC 14580]
 gi|52348815|gb|AAU41449.1| YqiY [Bacillus licheniformis ATCC 14580]
 gi|317392915|gb|EFV73709.1| YqiY protein [Bacillus sp. BT1B_CT2]
          Length = 220

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 29/176 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPT 234
           +T+   A   V  F+LG++++L      +       F+    +  PL+     + +GLP 
Sbjct: 22  VTLKVVAAAAVLGFLLGVLITLLKISSIKPLAWIADFYTSIFRGTPLVLQLMIVYYGLPQ 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +        L FD                  + +  IA    +AA+++EI+R+G+ A+ +
Sbjct: 82  V--------LGFDIDA---------------YWAAVIAFGLNSAAYVSEIIRAGINAIDK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           GQ EAA+ALG+ + K  + +LLPQA ++I+P L ++ + L K S++   +G  D++
Sbjct: 119 GQKEAAMALGVPYAKMMKDLLLPQAFKNIMPALINESITLTKESAVVTVIGLGDIM 174


>gi|256851552|ref|ZP_05556941.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 27-2-CHN]
 gi|260660975|ref|ZP_05861890.1| glutamine ABC transporter permease [Lactobacillus jensenii
           115-3-CHN]
 gi|256616614|gb|EEU21802.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 27-2-CHN]
 gi|260548697|gb|EEX24672.1| glutamine ABC transporter permease [Lactobacillus jensenii
           115-3-CHN]
          Length = 102

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 2/100 (2%)

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVG 353
           GQME A + G+T+ +A R V+LPQA +  IP L +Q++NL+KNSS LA   GF DL+  G
Sbjct: 4   GQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQFINLIKNSSVLAFVAGF-DLMYQG 62

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I   + Q +   L+    YL L++ ++ +M  L  KIA
Sbjct: 63  DVIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLEKKIA 102


>gi|226314897|ref|YP_002774793.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226097847|dbj|BAH46289.1| probable amino acid ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 234

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 14/196 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQ 253
           V G  L LF + L +   ++  +    +Y+  F   G P LV I L   +HF   P +  
Sbjct: 39  VCGTFLGLFIS-LGKMSSKRILRWTCSIYVELFR--GTPMLVQILL---IHFAVIPSIWG 92

Query: 254 FNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             + G S  SPE + S ++ALS   AA++AEI R+G+ ++  GQMEAA +LG+    A R
Sbjct: 93  ILYPGAS--SPEAIYSGFVALSLNAAAYMAEIFRAGIQSIDPGQMEAARSLGMNKGLAMR 150

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA   ++P + ++++ LLK+SSL   +   +L      +   T +     L    
Sbjct: 151 QIILPQAFTRMLPAIGNEFIALLKDSSLLAVIATPELNYAAMNVAKSTFERYPPYLTEAA 210

Query: 373 IYLSLSIMIALFMNRL 388
           +YL L+    LF++R+
Sbjct: 211 VYLVLT----LFLSRI 222



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    + G +NT  L     +  T +G  +  G++S+ +++ W C +YVE+FR  P LV
Sbjct: 18  DYRELFIRGIMNTILLTAVATVCGTFLGLFISLGKMSSKRILRWTCSIYVELFRGTPMLV 77

Query: 144 VIFFLYKSVL 153
            I  ++ +V+
Sbjct: 78  QILLIHFAVI 87


>gi|160900970|ref|YP_001566552.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160366554|gb|ABX38167.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 217

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 12/125 (9%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+ +V RGQ E A  LG+++ +  R ++LPQ    I
Sbjct: 85  PDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGAKVLGMSYGQTMRRIILPQMWARI 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ------------AIEIILIWM 371
           IPP++++ + L+K++SL   +   DL+     I+ +                + ++L W+
Sbjct: 145 IPPVSNETITLVKDTSLIYVLALNDLLRAARGIVQRDFTITPFVVAAGFYLVMTLVLTWI 204

Query: 372 FIYLS 376
           F YL 
Sbjct: 205 FQYLE 209


>gi|300310828|ref|YP_003774920.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300073613|gb|ADJ63012.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 216

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  IA++ Y++A++ EI R  + AVP  Q EA+ AL +T  +  R V+LPQA+R  
Sbjct: 84  PPMVAATIAMTIYSSAYLGEIWRGCIEAVPVPQWEASTALAMTRWQQLRYVILPQAVRIS 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP     + ++KN+S+A  +G  +L   G  + N T Q   +  I   IY      ++ 
Sbjct: 144 LPPTVGFLVQIVKNTSIASIIGLVELAQAGKLVSNATFQPFLVFPIVAGIYFVFCYPLSR 203

Query: 384 FMNRLNAK 391
           F   L  K
Sbjct: 204 FAFALERK 211


>gi|227432357|ref|ZP_03914349.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351878|gb|EEJ42112.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 490

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 72/117 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +A+   +AA++AEI+RSG+ +V  GQ EA+ +LGL+  K  R V+LPQA+++I+P
Sbjct: 359 FAAGALAMGLNSAAYVAEIIRSGINSVDFGQTEASRSLGLSKGKTMRYVILPQAVKNILP 418

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            L ++++ ++K  S+   +G  +L+   G +   + +    ++I   IY  L+  I+
Sbjct: 419 ALGNEFVTIIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLVIASLIYFVLTFGIS 475


>gi|76574840|gb|ABA47314.1| probable amino acid permease PA2202 [Pseudomonas cichorii]
          Length = 228

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 74/135 (54%), Gaps = 1/135 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V SG++++  GQ  AA ALG++  +  RL++LPQA+  +
Sbjct: 94  PALFTVVCALSLIGGAYLAHSVHSGILSLSSGQWAAAKALGMSPWQVLRLIILPQALPIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  +G  +L  V   + N+      EI L    +Y  +   + 
Sbjct: 154 LPSFLNQWISLIKDTSLAYVIGVGELSFVATQVSNRVMVYPTEIFLFIALVYFIICSALD 213

Query: 383 LFMNRLNAKIALKEK 397
           L  NRL    + K+ 
Sbjct: 214 LVANRLTGTGSTKKS 228


>gi|300855936|ref|YP_003780920.1| putative amino acid ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300436051|gb|ADK15818.1| predicted ABC-type aminoacid transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 221

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 33/240 (13%)

Query: 167 FGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KA 218
           F  F+N   +  P+L  T++ +    +F+ +L +V+S+         ++  G      +A
Sbjct: 5   FQWFINLFPIVLPSLKLTIEISLVSLIFTLLLSVVISIIRYYKVWGLYQLFGVYITFFRA 64

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            PL+     L FGLP  V+ ALK    F   V                    IAL+  TA
Sbjct: 65  TPLVAQLFMLYFGLPC-VIPALKSMTAFQATV--------------------IALTLNTA 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           +F+AE +R+ L +V  GQ+EA  ++ +T  +    V+LPQA    +P L +Q++ ++K S
Sbjct: 104 SFMAETLRAALESVEVGQLEACYSMSMTKYQTMMRVVLPQAFVVALPSLGNQFIGIIKGS 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L   VG AD+++   T    T +  E  L    IYL    +I +F+ ++   +  + +K
Sbjct: 164 ALGFTVGLADIMAKAKTEAALTLRFFEAYLCVTLIYL----VIVIFVEKIQRLVEKRIQK 219


>gi|299537491|ref|ZP_07050785.1| polar amino acid ABC transporter, inner membrane subunit
           [Lysinibacillus fusiformis ZC1]
 gi|298727052|gb|EFI67633.1| polar amino acid ABC transporter, inner membrane subunit
           [Lysinibacillus fusiformis ZC1]
          Length = 231

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 56/86 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
            +F +  IAL  ++ A+IAEI R  + ++ +GQMEA  +LG+T+ K  R ++LPQ+ +  
Sbjct: 88  SDFAAGSIALGIHSGAYIAEIFRGSIQSIDKGQMEAGRSLGMTYFKTMRRIILPQSFKRA 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           IP L +Q++  LK+SSL   +  ++L
Sbjct: 148 IPALANQFIIGLKDSSLVAYIAVSEL 173


>gi|194365477|ref|YP_002028087.1| polar amino acid ABC transporter inner membrane subunit
           [Stenotrophomonas maltophilia R551-3]
 gi|194348281|gb|ACF51404.1| polar amino acid ABC transporter, inner membrane subunit
           [Stenotrophomonas maltophilia R551-3]
          Length = 581

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   AAF AE++R G+++V  GQ EAA ALGL   +  R ++LPQAMRSI+P
Sbjct: 161 FTAAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRRIILPQAMRSILP 220

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  + L K++S+   +   +L      I  +  + + ++++    YL +  +++L  
Sbjct: 221 AAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLLQ 280

Query: 386 NRLNAKIA 393
            R+  + A
Sbjct: 281 RRVEQRFA 288


>gi|329296884|ref|ZP_08254220.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 221

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 30/206 (14%)

Query: 193 SFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           S + G +L++   R SR      + +     ALPLL +   L F LP       +Y +  
Sbjct: 31  SLLWGALLAVLLMRASRFWLRLLNLYRGLTLALPLLVVIYLLYFVLP-------EYDITL 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV+G                  +AL+ Y A +IA+++RS + A+P+GQ EA   LGL+
Sbjct: 84  SSPVVG-----------------VLALTLYYAPYIAQVIRSAIDALPKGQWEACRVLGLS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQ +  ++ PL      L+K+S+L   V   + +      I+ T   +EI
Sbjct: 127 RSEQLRDVVLPQTLPQMLSPLVGLMTVLIKDSALLSIVSVQEFMYAAKQAISDTYAPLEI 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            L     Y  L+ +I      L +++
Sbjct: 187 YLTVALCYWLLNSVIDWLARGLESRM 212


>gi|310287213|ref|YP_003938471.1| Glutamate transport system permease protein GluC [Bifidobacterium
           bifidum S17]
 gi|311064073|ref|YP_003970798.1| Glutamate transport system permease protein GluC [Bifidobacterium
           bifidum PRL2010]
 gi|309251149|gb|ADO52897.1| Glutamate transport system permease protein GluC [Bifidobacterium
           bifidum S17]
 gi|310866392|gb|ADP35761.1| Glutamate transport system permease protein GluC [Bifidobacterium
           bifidum PRL2010]
          Length = 225

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 25/214 (11%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG+VL +       + R     + +  K LPL  I  F++ G         + +L
Sbjct: 29  LFSLILGVVLVMMRISPISSLRTVAGAYVELFKNLPLTIIMVFMVLGAYA------QLKL 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F    +  F ++  +            LS YTAAF+ E +RSG+  VP GQ EAA ALG
Sbjct: 83  TFSDTFVTNFFWLAVT-----------GLSLYTAAFVCESLRSGINTVPIGQAEAARALG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTGQ 362
           L   ++   ++LPQA R  + PL +  + LLKN +  A A    +  S+  T+I      
Sbjct: 132 LGFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSTMIEFHPDV 191

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 192 IVQIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|227510176|ref|ZP_03940225.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227513104|ref|ZP_03943153.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227083679|gb|EEI18991.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227190381|gb|EEI70448.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 214

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 25/182 (13%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           + ++   +  PLL    F+ +GLP + +I  +Y                         +L
Sbjct: 53  NLYDWLMRGTPLLLQLIFVFYGLPVIGIIFERYD-----------------------AAL 89

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +  +  YTA F AEI R G  +VPRGQ E+A  L L++ +  R +++PQ  + ++P + +
Sbjct: 90  FAFILNYTAYF-AEIFRGGFQSVPRGQFESARVLRLSYGQTIRKIIIPQVFKIVLPSIGN 148

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +NL+K+SSL   +G  DL+  G     +    + ++L+ + IYL+L+ +  + +  + 
Sbjct: 149 EVINLVKDSSLVYVIGLGDLLRAGNVATARDVTLLPLVLVGI-IYLALTAICTIVLKVIE 207

Query: 390 AK 391
            +
Sbjct: 208 KR 209


>gi|254975773|ref|ZP_05272245.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255314902|ref|ZP_05356485.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255517576|ref|ZP_05385252.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255650687|ref|ZP_05397589.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|260683774|ref|YP_003215059.1| putative amino-acid ABC transporter permease [Clostridium difficile
           CD196]
 gi|260687434|ref|YP_003218568.1| putative amino-acid ABC transporter permease [Clostridium difficile
           R20291]
 gi|306520612|ref|ZP_07406959.1| putative amino-acid ABC transporter, permease protein [Clostridium
           difficile QCD-32g58]
 gi|260209937|emb|CBA63909.1| probable amino-acid ABC transporter, permease protein [Clostridium
           difficile CD196]
 gi|260213451|emb|CBE05127.1| probable amino-acid ABC transporter, permease protein [Clostridium
           difficile R20291]
          Length = 220

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 90/160 (56%), Gaps = 15/160 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS ++G +++L     S ++  K    +  +Y+S F   G P   L+   + L+F    
Sbjct: 31  VFSLIIGTIVAL-----SSYYKVKVLNQICKVYVSIFR--GTP---LMPQLFFLYFGLAY 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F       + P F +  I LS    A+++E +R+ ++++ +GQ+EAA  +GLT+ + 
Sbjct: 81  MNDFV----KNMDPVFAT-SIVLSLNMGAYMSETIRASILSIDKGQIEAAYVMGLTNLQT 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            + +++PQA+R  +P L + +++L+K SS+A  VG  D++
Sbjct: 136 MKRIVIPQAVRVALPSLFNNFIDLIKGSSVAFVVGVNDIM 175



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 Y-------KSVLSVLPIPDHSIVLPFGM 169
           Y         V ++ P+   SIVL   M
Sbjct: 75  YFGLAYMNDFVKNMDPVFATSIVLSLNM 102


>gi|159905112|ref|YP_001548774.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C6]
 gi|159886605|gb|ABX01542.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C6]
          Length = 226

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 28/209 (13%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKY 242
           KI VFS ++G+ L   L   R+S +   +        YIS+F I    G P LV I + Y
Sbjct: 30  KITVFSIIIGLFLGTILGMGRISYNIIYR--------YISSFYIEFVRGTPLLVQIMIIY 81

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P  G  N          + +  +AL   + A++ EI+++G+++V  GQMEAA +
Sbjct: 82  ---FGLPSFG-INL-------SAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAARS 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL   +   +L  VG  I + T  
Sbjct: 131 LGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSSTYN 190

Query: 363 A----IEIILIWMFIYLSLSIMIALFMNR 387
           A    + + L ++ + L LS ++    NR
Sbjct: 191 AWTPLLGVALFYLIMTLPLSKLVQHIENR 219


>gi|153833179|ref|ZP_01985846.1| membrane protein [Vibrio harveyi HY01]
 gi|148870609|gb|EDL69517.1| membrane protein [Vibrio harveyi HY01]
          Length = 229

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV RGQ EAA ALG++   A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQAHAFVRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P LT+Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLL 174


>gi|78184424|ref|YP_376859.1| amino acid ABC transporter permease [Synechococcus sp. CC9902]
 gi|78168718|gb|ABB25815.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. CC9902]
          Length = 324

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE VR GL A+P  Q EAA+ LGL+ R+  +LV+LPQA R  +P LT+Q + LL+N+S
Sbjct: 202 YIAEDVRGGLQAIPPTQREAAMVLGLSPRQTLQLVVLPQAFRVALPSLTNQAVGLLQNTS 261

Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +G  +L+ +  +++      G+ +E+ +    +Y      +AL    L  ++
Sbjct: 262 LMAILGLVELLGISRSLLANPAFIGRYLEVYIWLAAVYWLACTAMALLARHLEIQL 317


>gi|330955285|gb|EGH55545.1| amino acid ABC transporter ATP-binding protein [Pseudomonas
           syringae Cit 7]
          Length = 349

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 63/101 (62%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S +S  F S  IAL     A++AEI R GL++V +GQ EAA ALG+    A RLV++PQA
Sbjct: 20  SVLSQPFYSGLIALVLTETAYMAEIHRGGLLSVLKGQREAARALGIRGLGAQRLVVIPQA 79

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +R  +P LT++Y+ ++K +SL   +   +L+ VG  +  Q 
Sbjct: 80  IRISLPTLTNEYVTIVKLTSLVSVISLNELLLVGQRLYAQN 120


>gi|190574065|ref|YP_001971910.1| putative transmembrane ABC transporter [Stenotrophomonas
           maltophilia K279a]
 gi|190011987|emb|CAQ45609.1| putative transmembrane ABC transport protein [Stenotrophomonas
           maltophilia K279a]
          Length = 581

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   AAF AE++R G+++V  GQ EAA ALGL   +  R ++LPQAMRSI+P
Sbjct: 161 FTAAVLGLTLNQAAFSAEVIRGGILSVDNGQYEAAAALGLPRARQVRRIILPQAMRSILP 220

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  + L K++S+   +   +L      I  +  + + ++++    YL +  +++L  
Sbjct: 221 AAFNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLMQ 280

Query: 386 NRLNAKIA 393
            R+  + A
Sbjct: 281 RRVEQRFA 288


>gi|134046500|ref|YP_001097985.1| polar amino acid ABC transporter inner membrane subunit
           [Methanococcus maripaludis C5]
 gi|132664125|gb|ABO35771.1| amino acid ABC transporter membrane protein, PAAT family
           [Methanococcus maripaludis C5]
          Length = 226

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 28/209 (13%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKY 242
           KI VFS ++G+ L   L   R+S +   +        YIS+F I    G P LV I + Y
Sbjct: 30  KITVFSIIIGLFLGTILGMGRISYNIVYR--------YISSFYIEFVRGTPLLVQIMIIY 81

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P  G  N          + +  +AL   + A++ EI+++G+++V  GQMEAA +
Sbjct: 82  ---FGLPSFG-INL-------SAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAARS 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL   +   +L  VG  I + T  
Sbjct: 131 LGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSSTYN 190

Query: 363 A----IEIILIWMFIYLSLSIMIALFMNR 387
           A    + + L ++ + L LS ++    NR
Sbjct: 191 AWTPLLGVALFYLIMTLPLSKLVQHIENR 219


>gi|306833703|ref|ZP_07466830.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424473|gb|EFM27612.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 230

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 59/89 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++   AA I+E+ +S   A+P+GQ+EA +++GLT  +    +LLPQA R  +P +T+ 
Sbjct: 102 LAMTLLFAASISEVFKSSYQALPKGQLEAGLSIGLTDYQTFVRILLPQAFRIALPNITTA 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +NLLK+ +LA  +G  DL+  G  +I++
Sbjct: 162 IINLLKDIALAYTIGLVDLMGAGNLVISR 190


>gi|319943776|ref|ZP_08018057.1| glutamine/glutamate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
 gi|319743009|gb|EFV95415.1| glutamine/glutamate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
          Length = 220

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 73/141 (51%), Gaps = 28/141 (19%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    FL +GLP       K  +H+D    G     F+GGS                 
Sbjct: 64  PLLIQLFFLYYGLP-------KIGIHWDGFTCGVIALTFLGGS----------------- 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++AE +R+GL AVPRGQ+E+A A+GL   +  R V+LPQA+   +P LT+  L L+K 
Sbjct: 100 --YMAEALRAGLQAVPRGQVESARAIGLRRAQILRHVVLPQALAIALPALTANALFLVKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN 358
           +S+  AV  A+L+ V   II 
Sbjct: 158 TSVINAVSVAELLFVTKDIIG 178


>gi|323526241|ref|YP_004228394.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383243|gb|ADX55334.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 219

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 18/207 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  + G VL+L         H +T   L  +Y+S  ++ G P LV I   + +++  P  
Sbjct: 31  FGLIAGAVLALMGVS-----HSRTLNWLARVYVS--VMRGTPLLVQI---FVIYYGLPSF 80

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G        ++ P    + IALS   AA+++E +R  ++ + +GQ  AA +LGL+ R+  
Sbjct: 81  G-------ISLDPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQTL 132

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L   
Sbjct: 133 RYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAA 192

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            +Y  L  ++ L       ++AL  + 
Sbjct: 193 AVYWVLCQILELLQRWYERRLALPSRH 219


>gi|239816391|ref|YP_002945301.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802968|gb|ACS20035.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 217

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 18/208 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A  FV   +LG++++L      R       + +   +I  F   G P L+ + L 
Sbjct: 19  TLALSAIAFVGGAILGLIIALM-----RTSESAWARGVSTTFIQIFQ--GTPLLLQLFL- 70

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             + F  PVLG         ++P +++  +AL   +AAF+ EI R  + A+PRGQ EAA 
Sbjct: 71  --VFFGAPVLGL-------DINP-WVAAGVALILNSAAFLGEIWRGCIEAIPRGQWEAAQ 120

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           AL L +    R V+LPQA++  + P     + ++K +SLA  +GF ++   G  + N T 
Sbjct: 121 ALNLKYAARMRDVVLPQALKIALAPTVGYVVQIIKGTSLAAIIGFVEVTRAGQVVNNATF 180

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q + +  +   IY ++   ++L   R+ 
Sbjct: 181 QPLVVFSVVAAIYFAICWPLSLLAARME 208


>gi|313891667|ref|ZP_07825274.1| putative glutamine ABC transporter, permease protein GlnP
           [Dialister microaerophilus UPII 345-E]
 gi|329122023|ref|ZP_08250632.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
 gi|313119945|gb|EFR43130.1| putative glutamine ABC transporter, permease protein GlnP
           [Dialister microaerophilus UPII 345-E]
 gi|327467075|gb|EGF12587.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
          Length = 217

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G S    +F S  IA     AA+ AEI R G+ ++ +GQ E A  LG  + +  R ++L
Sbjct: 78  LGNSFQMNDFSSAIIAFVANYAAYFAEIFRGGIQSIGKGQYEGAQVLGFNYSQTMRYIIL 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ ++ ++PPL ++ + LLK++SL   +   DL+ V  +I+ +       ++  +F YL 
Sbjct: 138 PQVVKRVLPPLGNETITLLKDTSLVYILAMNDLMRVTRSIVQRDFDTTAFLVAGVF-YLV 196

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + ++   +  L  K A+  +
Sbjct: 197 CTFVLTKILTWLENKYAVYSE 217


>gi|311107288|ref|YP_003980141.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Achromobacter
           xylosoxidans A8]
 gi|310761977|gb|ADP17426.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Achromobacter xylosoxidans A8]
          Length = 217

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 75/132 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +   + L+    A+ AE+VR  + AVP GQ EA +AL LT  +  R +++PQA+ ++
Sbjct: 86  PAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALNLTRGQIMRRIVVPQAVPAM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP  +  + LLKN++L   +   DL   G  + ++T +  EI  + + +Y +++++I  
Sbjct: 146 LPPAGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLMLLMYFAVALLITA 205

Query: 384 FMNRLNAKIALK 395
            +  L  K+ ++
Sbjct: 206 GVRLLERKVRVR 217



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ A  +    G GRLS+ + + WI  VYVEVFR    LV +F+ 
Sbjct: 15  LLQGLAVTLEIMAGAVVLAVPLALAAGIGRLSSLRPLRWIAAVYVEVFRGTSALVQLFWF 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|194292632|ref|YP_002008539.1| ABC transporter, permease protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193226536|emb|CAQ72487.1| putative ABC transporter, permease protein [Cupriavidus taiwanensis
           LMG 19424]
          Length = 270

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 18/190 (9%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----AL 240
           N +I VF+  LG V+ L    LS   H    +     ++  F     P LVL+       
Sbjct: 66  NIEISVFAMALGTVVGLVIGALSLSSHAAL-RVFTRTWVQAFR--NAPVLVLVYFTTYVF 122

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            ++LH    V   F F       P+++ + + L+   +A +AEI R  + ++P  Q EAA
Sbjct: 123 PFELHL---VHWTFPF-------PDWVKVVLGLALPASANVAEIFRGAIQSIPSAQWEAA 172

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +L L  R+  RLV+LPQ +R ++PP  + Y ++  ++SLA  VG  D+V       N  
Sbjct: 173 QSLALRRRQIFRLVVLPQCLRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQVASNTV 232

Query: 361 GQAIEIILIW 370
            +    IL++
Sbjct: 233 ARTDFTILVY 242



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 13/96 (13%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++  A+L G +    ++   M   T++G ++GA  LS++  +    R +V+ FRN P LV
Sbjct: 54  TWTPALLRGLLANIEISVFAMALGTVVGLVIGALSLSSHAALRVFTRTWVQAFRNAPVLV 113

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           +++F              + V PF + L +    FP
Sbjct: 114 LVYFT-------------TYVFPFELHLVHWTFPFP 136


>gi|295095777|emb|CBK84867.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 308

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 76/134 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAIVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTVRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL ++ +++  
Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITTVLSAI 265

Query: 385 MNRLNAKIALKEKK 398
            + +   +A  E++
Sbjct: 266 QHVIERGLARSERR 279


>gi|283796751|ref|ZP_06345904.1| L-cystine ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291075637|gb|EFE13001.1| L-cystine ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|295092596|emb|CBK78703.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
          Length = 221

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 23/222 (10%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           + PT T+   A  FV S +L +V++        +F     + +  +Y+S F   G P   
Sbjct: 16  ALPT-TLSLAAVSFVLSLLLAVVIAGI-----DYFKVPVLRQVCAVYVSFFR--GTP--- 64

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   + L+F  P      FI      P F    + L+  +AA++ E VR  L++VP GQ
Sbjct: 65  LIPQLFLLYFGIP-----TFIPELRDIPAFAVCIVGLTLNSAAYMKEAVRGALLSVPAGQ 119

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA+A G+T  +A   ++ PQA+R  IP L +  ++++K +S+A  +G  ++ +     
Sbjct: 120 REAALAHGMTPLQAMAHIVFPQAVRVAIPSLFNNLVDIVKGTSMAFTIGVIEITAAANLR 179

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + T +  E  ++ M +Y     +I L + R     AL EKK
Sbjct: 180 ASVTFRYFEAYMLLMLLYW----VIILVLERAE---ALLEKK 214


>gi|116696424|ref|YP_842000.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113530923|emb|CAJ97270.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 257

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 92/155 (59%), Gaps = 11/155 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+  +P L+LI   +  +F  P+L       G  VS E +++ +AL+   AAFIA+ + +
Sbjct: 73  LLRAVPVLMLI---FWTYFLLPMLA------GVQVS-EVLTVVLALALVGAAFIAQSLHA 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+  GQ +AA+ALG++  +A   V+LPQA+R+++P L + ++ L K++SLA  VG +
Sbjct: 123 GIAAIGAGQRQAALALGMSRTQALWHVVLPQALRAMLPSLANTWVALTKDTSLAYIVGVS 182

Query: 348 DLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMI 381
           +L ++   +  ++   A E+      +Y  L +MI
Sbjct: 183 ELSTLATQVNGRSMSYAAEVFAAVALLYFVLCVMI 217


>gi|256832192|ref|YP_003160919.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
 gi|256685723|gb|ACV08616.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
          Length = 279

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++A+IAE +R+G+ AVP GQ+EAA +LG++  +    V LPQA R ++PP+T++
Sbjct: 150 LALGIVSSAYIAETIRAGIQAVPPGQIEAARSLGMSPMRTMLTVTLPQAFRIVLPPMTNE 209

Query: 331 YLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K++SL   +G +    DL  VG   +N     +  + +    YL ++I +     
Sbjct: 210 LILLTKDTSLVYLLGLSAAAYDLTKVGRDTLNSGIGGLTGLFVVGAAYLCITIPLGFLAR 269

Query: 387 RLNAK 391
            L  K
Sbjct: 270 WLEKK 274


>gi|33152996|ref|NP_874349.1| amino-acid ABC transporter permease protein [Haemophilus ducreyi
           35000HP]
 gi|33149221|gb|AAP96738.1| amino-acid ABC transporter permease protein [Haemophilus ducreyi
           35000HP]
          Length = 238

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 13/152 (8%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS  +I G P LV I++ +   +  P LG +       V P   +  I  S    A+ +
Sbjct: 76  YIS--IIRGTPMLVQISIVF---YGLPALGFY-------VDP-IPAAIIGFSLNIGAYAS 122

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+ + AVP+GQ EA  ++G+T+ +  R ++ PQA+R  IPPL++ ++ L K++SLA 
Sbjct: 123 ETVRAAISAVPKGQWEAGYSIGMTYLQTFRRIIAPQAIRVAIPPLSNTFIGLFKDTSLAS 182

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            V   ++  V   + N +   + + +   FIY
Sbjct: 183 VVTVTEMFRVAQQMANMSYDFLPVYIEAAFIY 214


>gi|330821191|ref|YP_004350053.1| amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
 gi|327373186|gb|AEA64541.1| amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
          Length = 223

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 13/150 (8%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           FH +    + + YI  F  F  P +VL+AL Y   +  P  G        T+S  F ++ 
Sbjct: 52  FHHRVANLVLIAYIDLFRSF--PVVVLLALIY---YGLPFFG-------ITLS-SFAAVV 98

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   + +  EI R+G+ +VP GQ EAA +LG    +    ++LPQA+R+++ PL S 
Sbjct: 99  LALALNNSGYYGEIFRAGIESVPHGQREAARSLGFGRSREIAYIVLPQAVRNVLAPLASN 158

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            L L K++S+A  V   +L+        QT
Sbjct: 159 TLELFKSTSIASLVSLPELLRSSRVAQEQT 188


>gi|317152558|ref|YP_004120606.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316942809|gb|ADU61860.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 218

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 73/127 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  +  A+IAEI R  ++++  GQMEAA +LG+ + +A   ++LPQA++  +P L +Q
Sbjct: 92  LALGIHNGAYIAEIFRGAIVSISNGQMEAARSLGMPYPRAMLRIILPQALKRAVPSLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+SSLA  +   +L+     + +     +E++ I    YL  + + +    RL +
Sbjct: 152 FIIALKDSSLASTITINELLLKSQQLASSNFMMMEMLFIAALFYLFYTAIFSWLFRRLES 211

Query: 391 KIALKEK 397
           ++ +  +
Sbjct: 212 RLDVSTQ 218


>gi|229816475|ref|ZP_04446775.1| hypothetical protein COLINT_03528 [Collinsella intestinalis DSM
           13280]
 gi|229807942|gb|EEP43744.1| hypothetical protein COLINT_03528 [Collinsella intestinalis DSM
           13280]
          Length = 286

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 76/132 (57%), Gaps = 4/132 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F  L + ++   +  +AE+ R+G+ AVPRGQ EAA+ALG++  +    ++LPQA+R +I
Sbjct: 146 SFWMLALPVALAASGVLAEVFRAGVNAVPRGQTEAALALGMSPFRVKLKIVLPQAIRYVI 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L SQ + ++K++++A  V + D++     +I      +   L+   IY+ L+  I   
Sbjct: 206 PSLISQLVVVVKDTTVAYVVSYPDMLQNARVLITNYDALVSTYLVVAVIYILLNYAI--- 262

Query: 385 MNRLNAKIALKE 396
            N+L+  +A + 
Sbjct: 263 -NQLSVYVARRS 273


>gi|146278101|ref|YP_001168260.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556342|gb|ABP70955.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 226

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 33/220 (15%)

Query: 182 TMDTNAKIFVFSFVLGIVLSL---FATRLSRHF---HEKTGKALPLLYISTFLIFGLPTL 235
           T+   A +      LG+VL+    +  RL+  F       G+ALP L +   + FGLP L
Sbjct: 31  TIWLAAAVIALGLSLGLVLACLRAYGWRLANFFIICFADMGRALPPLVLILIIYFGLPGL 90

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                   L    P++                 L + L    AAF  EI  +GL +VP+G
Sbjct: 91  -------GLRVPGPLV-----------------LILVLGTVLAAFAEEIFWAGLTSVPKG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  A GL   +    + LPQA R  +PPL ++ L + K ++L   +G ++++SV  T
Sbjct: 127 QWEAGRATGLGFTQTLIQIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILSVAST 186

Query: 356 IINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKI 392
             + TG A  + +    ++ ++L L ++  L   R   K+
Sbjct: 187 AQSFTGSAAPLTMGAIAYVIVFLPLVVLTRLLERRFAWKV 226


>gi|302554580|ref|ZP_07306922.1| glutamate permease [Streptomyces viridochromogenes DSM 40736]
 gi|302472198|gb|EFL35291.1| glutamate permease [Streptomyces viridochromogenes DSM 40736]
          Length = 221

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 74/121 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT++F+ E +RSG+  VP GQ EAA A+GLT R+   LV+LPQA RS + PL +  + L+
Sbjct: 101 YTSSFVCEALRSGINTVPVGQAEAARAIGLTFRQVLGLVVLPQAFRSSVVPLANVLIALI 160

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           KN+++A A+G A+   +   +I    Q + I  I  F ++ L++   L +  +  K+A+K
Sbjct: 161 KNTTVAAAIGVAEAAVLMKEMIENEAQLLLISAIIAFGFVVLTLPTGLILGWVGKKVAVK 220

Query: 396 E 396
            
Sbjct: 221 R 221


>gi|163856730|ref|YP_001631028.1| putative amino acid ABC transporter, permease protein [Bordetella
           petrii DSM 12804]
 gi|163260458|emb|CAP42760.1| putative amino acid ABC transporter, permease protein [Bordetella
           petrii]
          Length = 217

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+F +  +A +   AA+ AEI R+G+++V RGQ E +  LG+++ +  R ++LPQ ++ +
Sbjct: 85  PDFPAAIVAFALNYAAYFAEIFRAGILSVDRGQYEGSKVLGMSYLQTMRRIVLPQMVQRV 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP++++ + L+K++SL   +   D++     I+ +       ++   F YL +++++  
Sbjct: 145 LPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDFTTTPFLVAAAF-YLFMTLLLTW 203

Query: 384 FMNRLNAKIALKEK 397
               +  + A  ++
Sbjct: 204 LFQHMEKRYAKYDQ 217


>gi|290891403|ref|ZP_06554464.1| hypothetical protein AWRIB429_1854 [Oenococcus oeni AWRIB429]
 gi|290479049|gb|EFD87712.1| hypothetical protein AWRIB429_1854 [Oenococcus oeni AWRIB429]
          Length = 105

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 63/103 (61%)

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V +GQMEAA + GL++ +A R V++PQ MR  +P L +Q++  LK++S+  A+G  +L
Sbjct: 1   MSVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLKDTSILQAIGLVEL 60

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  I+ +T Q  +I  I   IYL +  ++    N + +KI
Sbjct: 61  TQTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKI 103


>gi|293606208|ref|ZP_06688571.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815355|gb|EFF74473.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 223

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 19/220 (8%)

Query: 187 AKIFVFSFVLGI--------VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           + IF +SF L I        V+++ AT L        G AL +L  S   I  LPT  +I
Sbjct: 2   SPIFDWSFALEILPTLGSALVITIEATVLGMLVAVTLGLALAMLRRSRLRIVSLPTAFVI 61

Query: 239 ALKYQLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
               +     P+L Q  F+       G  +SP   +  +AL  + A + AE+ R+G+ AV
Sbjct: 62  ----EFIRSTPLLVQMYFLFYVLPLTGVQMSP-LATGIVALGLHYATYCAEVYRAGIEAV 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ EAA AL ++  +    V+LPQA+  ++P L +  + + K++ L  A+   +L+  
Sbjct: 117 PRGQWEAATALNMSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQ 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I + T +  E + +   ++L+LS++ A  +  L A++
Sbjct: 177 SKMIGSATFRYTEPLTLVGVLFLALSLVAAWGVRGLEARL 216


>gi|317048137|ref|YP_004115785.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949754|gb|ADU69229.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 249

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 64/116 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI+R G+ A+P+GQ+ AA ALG  H    R V+ PQ MR I+P L + +  LLK 
Sbjct: 104 AAYLAEIIRGGVQALPKGQINAAKALGFNHLNVARYVIFPQTMRLILPSLGNSFNGLLKT 163

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +S+A  +   +L+     ++ +    +E+ ++    YL L+ +      ++    A
Sbjct: 164 TSIASVISVEELLRRTQILMQEQFMVLELFMVAATYYLLLTTLWDFIQRKIERHYA 219



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +G VNT  L  +GM    ++G L+   RLS    +  I R Y+ VFR  P LV +  +
Sbjct: 19  IFMGAVNTVLLTLAGMAGGLVLGILLAFARLSPWSWINQIARAYIWVFRGTPLLVQLIII 78

Query: 149 Y 149
           Y
Sbjct: 79  Y 79


>gi|256545654|ref|ZP_05473011.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Anaerococcus vaginalis
           ATCC 51170]
 gi|256398630|gb|EEU12250.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Anaerococcus vaginalis
           ATCC 51170]
          Length = 520

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 73/130 (56%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++ +I +S  T A+++E+VR G+ +V  GQ EA  ALG+TH +    V++PQ ++SI+P 
Sbjct: 379 LAAFIIVSINTGAYLSEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPA 438

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + ++++  +K++S+   +   +L  V  +I   T Q  +  LI   IY  L+ +    + 
Sbjct: 439 IANEFVVNIKDTSVLNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFITTRIIL 498

Query: 387 RLNAKIALKE 396
            +  K   KE
Sbjct: 499 LIEKKFTNKE 508


>gi|111018891|ref|YP_701863.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110818421|gb|ABG93705.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 222

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 14/202 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF +G+V++L    L+R    +    +   Y+S  +I G P LV      QL      
Sbjct: 29  IISFTIGLVIALLMA-LARISSIRPLSVIARFYVS--IIRGTPLLV------QLFIVFYA 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L QF    G  + P F +  IA S     + AE++RS ++++P+GQ EAA  +G+ +   
Sbjct: 80  LPQF----GVVLDP-FPAAVIAFSLNVGGYAAEVIRSAILSIPKGQWEAAQTIGMGYTTT 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + ++LPQA R  +PPL++  ++L+K++SLA  +   +L+ V       T     +  + 
Sbjct: 135 LQRIVLPQAARVAVPPLSNTLISLVKDTSLASTILVTELLRVAQLAAAPTFDFFALYSVA 194

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
              Y  + I ++    RL A++
Sbjct: 195 ALYYWVICIFLSAVQGRLEARL 216


>gi|13474522|ref|NP_106091.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099]
 gi|14025276|dbj|BAB51877.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099]
          Length = 224

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 86/160 (53%), Gaps = 14/160 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S  +GI + L  + L R +  K  + L + Y   F    LP LV++ L Y   +  P 
Sbjct: 32  ILSIGIGIPIGLLIS-LVRLYAPKPLRWLAVGYTDIFR--ALPVLVVLILIY---YALPF 85

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG       S V+        A +   +A+ AE+ RSG+ ++P+GQ EA+ ALGL     
Sbjct: 86  LGIRLSSWASAVT--------AFAFIMSAYSAEVFRSGIESIPKGQFEASQALGLPFLLT 137

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            R V+LPQA+R +IPP+TS  +++ K++SLA  V   +L+
Sbjct: 138 LRKVVLPQAIRVVIPPMTSNCVSMFKDTSLASTVALPELL 177



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L GF+NT  L    +     IG L+   RL A K + W+   Y ++FR +P LVV+  
Sbjct: 19  ALLRGFLNTLLLGILSIGIGIPIGLLISLVRLYAPKPLRWLAVGYTDIFRALPVLVVLIL 78

Query: 148 LY 149
           +Y
Sbjct: 79  IY 80


>gi|323342443|ref|ZP_08082675.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463555|gb|EFY08749.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 220

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 85/149 (57%), Gaps = 3/149 (2%)

Query: 251 LGQFNFIGG---STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           L  F F+G    ST  P+   + +AL   ++A++AEI R+G+ AV +GQ EAA +LG+++
Sbjct: 72  LSLFYFLGSEYISTSVPDVGWIMVALIINSSAYVAEIFRAGIQAVDKGQFEAAKSLGISN 131

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               + ++ PQA+++I+P L ++++ ++K +SLA      +L++    + + T   +  +
Sbjct: 132 ANMMKKIIFPQAIKNILPALGNEFITMIKETSLASVFFVNNLMTSESIVSSATHLKLPSL 191

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +I   IY  ++   +  +     K+AL +
Sbjct: 192 MIVGVIYFIMTFSTSKLIAAFERKVALND 220


>gi|152995145|ref|YP_001339980.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150836069|gb|ABR70045.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 229

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 69/120 (57%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL     A+  E+ R  L ++P+GQ EAAIALG+   +    ++LPQ  R  +P L + +
Sbjct: 102 ALGLTFGAYATEVFRGALQSIPKGQHEAAIALGMGPIRKFYRIILPQVWRIALPGLGNLF 161

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   VG  D++      ++ T QA    L+  F+YL+L+I+  +F++ +  +
Sbjct: 162 LVLLKDTALVSVVGLDDIMRKANIAVSSTKQAFLFYLVAAFMYLALTIISMVFVSYMEKR 221



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G V T  LA S +    I+G L  + +LS+  ++ WI   Y  + R IP L+
Sbjct: 6   GFGDQLLQGAVVTLELALSSLFVGLILGLLGASAKLSSIAVIRWIANGYTTIIRGIPELL 65

Query: 144 VIFFLYKSVLSVL 156
            +  +Y    SVL
Sbjct: 66  TVLIIYFGATSVL 78


>gi|289178451|gb|ADC85697.1| GluC [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 228

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 23/153 (15%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R     + +  K +PL  I  F++ G      + L +  
Sbjct: 32  LFSTILGLILVMMRISPVSSLRKVSAGYVELFKNMPLTIIMVFMVLG--AFAQLKLSFSD 89

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F      Q NF         F      LS YTAAF+AE +RSG+  VP+GQ EAA A+G
Sbjct: 90  NF------QTNF---------FWLAVTGLSLYTAAFVAESLRSGINTVPKGQAEAARAMG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           L   ++  L+++PQA+R  + PL +  + LLKN
Sbjct: 135 LNFMQSATLIIMPQAIRGSVAPLGNTLIALLKN 167


>gi|229591500|ref|YP_002873619.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229363366|emb|CAY50505.1| putative ABC transporter, permease [Pseudomonas fluorescens SBW25]
          Length = 330

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 97/193 (50%), Gaps = 15/193 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DK 248
           VFS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D 
Sbjct: 102 VFSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDH 154

Query: 249 PVLG-QFN---FIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            VLG  F    F   STV    +F    + LS   AA+ AEI+R GLI V  GQ EAA A
Sbjct: 155 IVLGVPFTGVVFAEWSTVDVLSQFTVAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAA 214

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T  
Sbjct: 215 LGLPASRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQA 274

Query: 363 AIEIILIWMFIYL 375
            I ++++    YL
Sbjct: 275 VIPLLIVATVWYL 287


>gi|183601789|ref|ZP_02963159.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683681|ref|YP_002470064.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190713|ref|YP_002968107.1| amino acid ABC transporter permease [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241196119|ref|YP_002969674.1| amino acid ABC transporter permease [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|183219395|gb|EDT90036.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219621331|gb|ACL29488.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240249105|gb|ACS46045.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250673|gb|ACS47612.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|295793702|gb|ADG33237.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 225

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 23/153 (15%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R     + +  K +PL  I  F++ G      + L +  
Sbjct: 29  LFSTILGLILVMMRISPVSSLRKVSAGYVELFKNMPLTIIMVFMVLG--AFAQLKLSFSD 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F      Q NF         F      LS YTAAF+AE +RSG+  VP+GQ EAA A+G
Sbjct: 87  NF------QTNF---------FWLAVTGLSLYTAAFVAESLRSGINTVPKGQAEAARAMG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           L   ++  L+++PQA+R  + PL +  + LLKN
Sbjct: 132 LNFMQSATLIIMPQAIRGSVAPLGNTLIALLKN 164


>gi|226224892|ref|YP_002758999.1| amino acid ABC transporter (permease) [Listeria monocytogenes
           Clip81459]
 gi|225877354|emb|CAS06068.1| Putative amino acid ABC transporter (permease) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 235

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I ++L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGMTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|182418791|ref|ZP_02950058.1| L-cystine permease protein TcyB [Clostridium butyricum 5521]
 gi|237667901|ref|ZP_04527885.1| L-cystine transport system permease protein TcyB [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377346|gb|EDT74906.1| L-cystine permease protein TcyB [Clostridium butyricum 5521]
 gi|237656249|gb|EEP53805.1| L-cystine transport system permease protein TcyB [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 213

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 30/170 (17%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQ 243
            V S  LGI++ L  T  S    + +G      +  PLL     + FGLP +        
Sbjct: 26  LVLSIPLGIIVGLMRTSKSIILRKISGAYVLIMRGTPLLLQIIVIFFGLPLV-------G 78

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + FD+                 F S  IA +    A+  EI R+G+ ++  GQ+EAA  L
Sbjct: 79  ITFDR-----------------FPSAIIAFTLNYGAYFGEIFRAGIQSIDEGQIEAAEVL 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           G+T +     ++LPQA ++++PP+ ++   L+K++SL   VG  +L+ VG
Sbjct: 122 GITPKDTFFRIILPQAFKTVLPPVANEITTLVKDTSLVYIVGMDELLKVG 171


>gi|297203990|ref|ZP_06921387.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|297148546|gb|EFH29017.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 327

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 4/130 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS   AA+ AE+VR G+++V +GQ EAA ALGL      R ++ PQA+RSI P   +Q
Sbjct: 172 VGLSLNEAAYAAEVVRGGILSVDQGQHEAASALGLPKGYQFRKIVFPQALRSITPNYVNQ 231

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L+K++SL   V   DL     S+G T        + +  +W  I  S   ++  ++ 
Sbjct: 232 LIGLIKSTSLVFYVSLLDLFGTVQSMGSTYPGDIVPLLLVATVWYLILTSAVSVVQFYVE 291

Query: 387 RLNAKIALKE 396
           R  A+ A + 
Sbjct: 292 RHYARGATRS 301


>gi|307727763|ref|YP_003910976.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588288|gb|ADN61685.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 248

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 24/163 (14%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP+L        +H D                 E  +  +A++    A+  EIVR
Sbjct: 75  FVFFGLPSL-------GIHID-----------------EIQAAILAMTVNLGAYAIEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ++AA ALGL  R+  R V+LPQA+ ++ P L SQ L ++  S++   +  
Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYVVLPQALANVFPALLSQVLIVMLGSAVVSQISV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            DL      I ++  ++ E  +I    YL LSI +   +NR  
Sbjct: 171 PDLTYAANFIQSRNFRSFESYVIITATYLLLSIALRQILNRFG 213


>gi|257790889|ref|YP_003181495.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|317488400|ref|ZP_07946954.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
 gi|325830513|ref|ZP_08163966.1| putative glutamate/glutamine/aspartate/asparagine transport system
           permease protein BztB [Eggerthella sp. HGA1]
 gi|257474786|gb|ACV55106.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|316912504|gb|EFV34059.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
 gi|325487422|gb|EGC89863.1| putative glutamate/glutamine/aspartate/asparagine transport system
           permease protein BztB [Eggerthella sp. HGA1]
          Length = 220

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 8/134 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +A + +T+A +AEIVR GL +VP GQ EAA + G +  +   L++LPQA+R++
Sbjct: 82  PPIGAAVLAFTLFTSASVAEIVRGGLASVPHGQYEAARSQGFSTVQTYVLIILPQALRNM 141

Query: 324 IPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEII-------LIWMFIYL 375
           +P L SQ++  +K++S L  A+   +L+  G  ++N      +I        LI+  +  
Sbjct: 142 VPALLSQFVTTIKDTSYLWGAMALQELMGRGMILMNSYNSTAQIFAIFGIMALIYFIVCF 201

Query: 376 SLSIMIALFMNRLN 389
           +LS ++  +  RL 
Sbjct: 202 TLSQIVRAYQRRLK 215


>gi|153011817|ref|YP_001373030.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563705|gb|ABS17201.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 226

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 5/138 (3%)

Query: 247 DKPVLGQ--FNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAI 301
           + P LGQ  F F G  T+  +  SL  A+   T    A+  EI+R+G+ A PRGQ EA+ 
Sbjct: 65  NTPFLGQIFFIFFGLPTLGLKMNSLTAAIVAMTFNLTAYACEIIRAGIEATPRGQFEASD 124

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL   +   LV++P A + + P +TSQ + +L  S+L   +  A+L  V   I ++T 
Sbjct: 125 ALGLKPVQTFFLVVIPPAFQRVWPAMTSQLVIILLASALCSQISVAELSYVANVIASRTF 184

Query: 362 QAIEIILIWMFIYLSLSI 379
           +  E  ++   +YL L+I
Sbjct: 185 RNFEAYIVVTILYLFLAI 202


>gi|150015936|ref|YP_001308190.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149902401|gb|ABR33234.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 213

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 38/217 (17%)

Query: 183 MDTNAKIFVFSFVL----GIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGL 232
           +    +IFV + VL    G+++++  T  S    + +G      +  PLL     + FGL
Sbjct: 15  LQVTLEIFVLTLVLSIPLGVIIAVMRTSKSLILKQISGIYILIMRGTPLLLQIIVIFFGL 74

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +        + FD+                 F +  +A +    A+  EI R+G+ ++
Sbjct: 75  PLV-------GISFDR-----------------FPAAILAFTLNYGAYFGEIFRAGIESI 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ+E A  LGL+ ++    ++LPQA ++++PP+ ++   L+K++SL   VG  +L+ +
Sbjct: 111 DNGQVEGAKVLGLSSKQTFFRIILPQAFKTVMPPVANEITTLVKDTSLVYVVGMDELLKI 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           G T  N+    + ++++   +YL   ++IA+F   L 
Sbjct: 171 GKTAANRDVSLVPLLIVGA-VYL---VVIAIFSQVLK 203


>gi|325528848|gb|EGD05896.1| amino acid ABC transporter inner membrane protein [Burkholderia sp.
           TJI49]
          Length = 219

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 77/136 (56%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+ P    ++  L+   AA+++E +R  ++ + RGQ  AA +LGLTH +  R V+ PQ
Sbjct: 81  GITLDPTTAGIF-TLTLNAAAYLSESMRGAILGIGRGQWAAAHSLGLTHVQTLRYVICPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + L    IY  LS
Sbjct: 140 ALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLYLAAAAIYWVLS 199

Query: 379 IMIALFMNRLNAKIAL 394
            +++    R+ +++AL
Sbjct: 200 TLLSRLQGRVESRLAL 215


>gi|317130817|ref|YP_004097099.1| polar amino acid ABC transporter inner membrane subunit [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475765|gb|ADU32368.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cellulosilyticus DSM 2522]
          Length = 224

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++    A+I+EIVR G+ ++ +GQMEA  +LGL+ R+  R ++ PQA + +IPPL +Q
Sbjct: 100 VAIAINAGAYISEIVRGGVQSIDKGQMEAGRSLGLSSRQTMRYIIWPQAFKRMIPPLGNQ 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK++S+   +   ++  +    ++ +   ++  ++    YL ++I   L + R+  
Sbjct: 160 FIISLKDTSVFAIISLQEVTFLMRMYVSSSANTLQPYIMLCLAYLIITIPAMLILRRIER 219

Query: 391 KI 392
           ++
Sbjct: 220 RL 221


>gi|271502696|ref|YP_003335722.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270346251|gb|ACZ79016.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 252

 Score = 70.5 bits (171), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 95/184 (51%), Gaps = 10/184 (5%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           ++P   +   A   V S + G++ ++  T L        G A  LL +       +P ++
Sbjct: 17  TYPDGPLGGAALTLVLSLMAGLISAVLGTVLGVALAMLRGWAGGLLAVVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   Y   F  P++   +        PE  ++  AL+   +A++A  V++G++A+  GQ
Sbjct: 77  LIFWTY---FLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIMAIGLGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +A ++LGL   +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   +
Sbjct: 127 WQAGMSLGLGRWQTLWHIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQV 186

Query: 357 INQT 360
            N++
Sbjct: 187 NNRS 190


>gi|304395133|ref|ZP_07377017.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357386|gb|EFM21749.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 308

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 3/137 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+   AA+ AEI+R G++ V  GQ+EAA ALGL+  + T  ++LPQA+R+II
Sbjct: 146 QFQAAVIGLTLVQAAYSAEIIRGGILGVDHGQVEAASALGLSATRRTFRIILPQALRAII 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381
           P   ++ ++L K +S+   +   +L      I N+  + I ++++   W  I  ++  +I
Sbjct: 206 PVAFNEIISLAKGTSVVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 265

Query: 382 ALFMNRLNAKIALKEKK 398
                R  A+   +E +
Sbjct: 266 QYNAERWMARSVTREPQ 282


>gi|296156735|ref|ZP_06839573.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893334|gb|EFG73114.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 220

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 19/185 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC- 275
           K + L Y+   L+  +P L+L+ L +   F  P LG    IG S ++       +A+ C 
Sbjct: 51  KPVALAYVE--LVRNIPYLILVYLSF---FGLPKLG----IGASAMT-------VAIGCT 94

Query: 276 --YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             YT  + +EI+R+ L +VPRGQ +A+++LG+T  +  R V+ PQ    + PP TS  + 
Sbjct: 95  VFYTGGYFSEILRAALRSVPRGQTQASLSLGMTFWQTQRHVIAPQLFGYVTPPTTSLVIM 154

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K+S++   +   ++      +   T   +E++     IY   S+++A    RL   I 
Sbjct: 155 MFKDSAIFSVMSLPEMTYQSNLLTANTFAYVEVLGTTALIYWICSVLLASVGRRLETAIG 214

Query: 394 LKEKK 398
            + + 
Sbjct: 215 RRARH 219


>gi|288555859|ref|YP_003427794.1| ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288547019|gb|ADC50902.1| ABC transporter (permease) [Bacillus pseudofirmus OF4]
          Length = 218

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 66/109 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  +A    ++A+++EI+R+G+ AV +GQ EAA ALG+  R     ++LPQA R+I+P
Sbjct: 88  FLAGVLAFGLNSSAYVSEIIRAGIQAVDKGQKEAAAALGIPERPMMIRIILPQAFRNILP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            L ++++NL K S++   +G  D++     +  Q  +  E +L    IY
Sbjct: 148 ALFNEFINLTKESAIVSIIGVWDIMRRAQMVNAQIYKYFEALLFVGLIY 196


>gi|154248468|ref|YP_001419426.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154162553|gb|ABS69769.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 473

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 56/81 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++ + +A++AE+VR GL A+P+GQ E A+A+GL      RLV+LPQA++ +IP + + 
Sbjct: 341 VGVALFASAYMAEVVRGGLQAIPKGQYEGAMAVGLPSSLMLRLVVLPQALKLVIPGIVNN 400

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           ++ L K+++L + V   DL+ 
Sbjct: 401 FIGLFKDTTLVLIVSIFDLLG 421


>gi|330891011|gb|EGH23672.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. mori str. 301020]
          Length = 246

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ +LG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPAGQYEASRSLGMGYMRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|330430556|gb|AEC21890.1| polar amino acid ABC transporter inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 226

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 74/131 (56%), Gaps = 4/131 (3%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           ++    +S  +A S   AAF AEI+R+G++ + RGQ  AA +LG+T  +  R ++LPQA 
Sbjct: 92  SIDIRLVSAMVAFSLLEAAFFAEIIRAGILGLSRGQFYAARSLGMTPYQTMRYIILPQAF 151

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL----S 376
           ++++P + +Q + + +++SL   +   D      +I  + G  I+++L    +Y     +
Sbjct: 152 KAMLPIMLTQCIVIFQDTSLVYVIALGDFFRNAVSIGERDGTLIQMLLFAGLVYWVICST 211

Query: 377 LSIMIALFMNR 387
           LSI++ +   R
Sbjct: 212 LSIVVKMVQQR 222


>gi|302554579|ref|ZP_07306921.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472197|gb|EFL35290.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
          Length = 298

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 23/207 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG VL +   RLS H   +   A+ + +  +     +P LVL+           + G   
Sbjct: 85  LGAVLGI--ARLSDHAWVRVPAAVVVEFFRS-----IPVLVLM-----------IFGLAL 126

Query: 256 FIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           F   + VS +   LY     L  Y A+ +AEIVR+G++++P+GQ EAA A+GL   +  R
Sbjct: 127 FAQYTNVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPQGQGEAAKAIGLRKGQLMR 186

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTG-QAIEIILIW 370
           L+LLPQA+ +++P + SQ + ++K+++L  AV  +++L+S   T+    G   I    + 
Sbjct: 187 LILLPQAVTAMLPAIVSQLVVIVKDTALGGAVLTYSELLSSANTMSGYYGANVIASFTVV 246

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             I+++L+  +  F + L  ++   +K
Sbjct: 247 AVIFIALNFALTSFASWLERRLRRAKK 273


>gi|222109009|ref|YP_002551275.1| hypothetical protein Arad_14101 [Agrobacterium radiobacter K84]
 gi|221727931|gb|ACM30981.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 232

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 18/201 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           T+ +   A I   +  LG+ + L A RL+         A+  +YIS F   G P LV + 
Sbjct: 22  TIYISVVAMIIAAALGLGLSVMLQANRLT--------AAIARVYISFFR--GTPVLVQLL 71

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + Y   F  P L    F     +SP   ++ I L  +TAA++AEI R+ L AV  GQ EA
Sbjct: 72  IIY---FGLPQL----FPAALGISP-VNAVIIGLGLHTAAYLAEIFRAALAAVGPGQKEA 123

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+++GLT  +A   V+  QA+R  IPP  + ++ L+KNSSLA  +G  ++++    + ++
Sbjct: 124 ALSIGLTPVQAFTDVVARQAIRHAIPPTGNIFIGLVKNSSLAFTLGVTEVLAQSKLLASE 183

Query: 360 TGQAIEIILIWMFIYLSLSIM 380
             +  E       +Y + +I+
Sbjct: 184 NLKFFEAYFAAGLVYWAFTIL 204


>gi|114327541|ref|YP_744698.1| Gln/Arg/Lys/His-binding protein and permease [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315715|gb|ABI61775.1| gln/Arg/Lys/His-binding protein and permease protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 503

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 24/133 (18%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP L                       G  + P F  + +AL   
Sbjct: 342 RGTPLLIQVLFVFYGLPNL-----------------------GIRLDPFFAGV-LALGLN 377

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AE  R+GL AVP GQ EAAIAL +T  +A R V++PQA R +IP +T+ +++ LK
Sbjct: 378 YAAYEAENYRAGLGAVPHGQYEAAIALNMTSFQALRHVVIPQAFRLVIPVMTNDFISALK 437

Query: 337 NSSLAVAVGFADL 349
           +SSL   +  ++L
Sbjct: 438 DSSLLSVITLSEL 450


>gi|27381510|ref|NP_773039.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27354678|dbj|BAC51664.1| blr6398 [Bradyrhizobium japonicum USDA 110]
          Length = 216

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 15/191 (7%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPE 265
           L R    K  ++L  +++  F   G P L+ + L Y   +  PVLG   N          
Sbjct: 40  LLRTAERKWVRSLAAMFVDFFQ--GTPMLMQLFLVY---YGLPVLGFHVNV--------- 85

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +++  I L+ + +AF+ EI R G++AVPRGQMEAA ALGL +      V+LPQA R  + 
Sbjct: 86  WVAASIGLTLHASAFLGEIWRGGIMAVPRGQMEAASALGLGYTSRMIDVVLPQAFRLSLA 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P     + L+K +SLA  +GF +L      + + T + +    +    Y +L   ++ + 
Sbjct: 146 PTVGFLVQLIKGTSLASIIGFVELSRSAQIVASTTYRPLLAYGMAGLCYFALCFPLSRYS 205

Query: 386 NRLNAKIALKE 396
           + L  ++A + 
Sbjct: 206 STLERRLATRS 216


>gi|239945339|ref|ZP_04697276.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239991796|ref|ZP_04712460.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291448801|ref|ZP_06588191.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
 gi|291351748|gb|EFE78652.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
          Length = 298

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 42/214 (19%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V S  LG VL++   RLS H          L +IST L+     +P LV+I
Sbjct: 84  TLKAFAYAAVLSLALGAVLAV--GRLSEHRV--------LRWISTLLVEFFRAMPVLVMI 133

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                ALK Q                        +L   L+ Y  + +AE+ R+G+ AV 
Sbjct: 134 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINAVD 172

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA ALG+   + T  VL PQA+R+++P + SQ +  LK++SL   + + + +  G
Sbjct: 173 RGQREAAYALGMRKTQVTAYVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 232

Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384
             I +     +  I + M    IY+ + ++++ F
Sbjct: 233 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 266



 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           +G ++  GRLS ++++ WI  + VE FR +P LV+IFF++ + L V P+P
Sbjct: 98  LGAVLAVGRLSEHRVLRWISTLLVEFFRAMPVLVMIFFIFVA-LKVQPLP 146


>gi|223041401|ref|ZP_03611605.1| amino-acid ABC transporter permease [Actinobacillus minor 202]
 gi|223017791|gb|EEF16197.1| amino-acid ABC transporter permease [Actinobacillus minor 202]
          Length = 227

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 109/213 (51%), Gaps = 26/213 (12%)

Query: 191 VFSFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           V SF++G++++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   
Sbjct: 29  VASFIIGMIIAVGVALIRVTPVNGVLH-RIALAIVKVYIS--IIRGTPMLVQISVVF--- 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P +G F       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+
Sbjct: 83  YGLPAIGVF-------IDP-IPAAIIGFSLNIGAYASETVRAAISSVPKGQWEAGFTIGM 134

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +  R ++ PQA+R  +PPL++ ++ L K++SLA  V   ++  V   + N +   + 
Sbjct: 135 TYMQTFRRIIAPQAVRVAVPPLSNTFIGLFKDTSLASXVTVTEMFRVAQQMANMSYDFLP 194

Query: 366 I-----ILIWMFIYLSLSIMIALFM--NRLNAK 391
           +     ++ W F ++   I   L +  NR  AK
Sbjct: 195 VYIEAGLIYWCFCWVLFYIQAKLEIRFNRFVAK 227


>gi|209546985|ref|YP_002278903.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538229|gb|ACI58163.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 248

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 10/160 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYTAAFI 281
           T+   G P LV + L Y        +GQ  F+  S     +   F   +IA +  +AA  
Sbjct: 57  TYAFRGTPLLVQLFLIYY------GIGQLPFVRQSFLWAVMREPFWCAFIAFTLNSAAHT 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E++R G+  VP GQ+EAA ALGL+     RL++ P A+R  +P   ++ + +LK SSLA
Sbjct: 111 TEVLRGGIQTVPLGQIEAAKALGLSRLHVMRLIVFPLAIRIALPAYVNEVIGMLKASSLA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +   ++  +   ++++T    E+ ++   +YL L+++I
Sbjct: 171 STITLLEITGIARQLVSETFAPYEVFIVAGSLYLLLTLII 210


>gi|325964968|ref|YP_004242874.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471055|gb|ADX74740.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 262

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 79/132 (59%), Gaps = 5/132 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   +A+I EI R+G+ +V +GQ EA  ALG+T+ K+  LV++PQ +R ++P L +Q
Sbjct: 106 IALSLIASAYIGEIFRAGIQSVDKGQGEACRALGMTYGKSMALVVIPQGIRRVLPALVNQ 165

Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K+SSL   +G      +L  VG      +G    +++  +F YL +++ +   +N
Sbjct: 166 FIAIVKDSSLVYFLGLLVSERELFRVGQDAAVLSGNLSPLVMAGVF-YLIITVPLTHLVN 224

Query: 387 RLNAKIALKEKK 398
             +++    +++
Sbjct: 225 YFDSRFRAGKRR 236


>gi|302337868|ref|YP_003803074.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301635053|gb|ADK80480.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 216

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 247 DKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
             P+L Q  FI       G  V+P ++S  IA S  T A++ EI R GL  + +GQ  AA
Sbjct: 62  STPLLVQLYFIYYGLPLLGIQVNP-YVSSVIAFSLNTGAYVVEIFRGGLEGIDKGQFYAA 120

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG+      R ++ PQ ++ +I PL SQ+  L+K++SLA  +   +L      + + T
Sbjct: 121 YSLGMGWFACLRYIIFPQVLQRVIAPLLSQFSYLIKDTSLAAVLVVQELTYTYRNVSSST 180

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + +E ++I M IY  L I+  L      A ++ + KK
Sbjct: 181 YRPMEALVIPMIIYFLLYIVFRL------ASMSFETKK 212


>gi|259502042|ref|ZP_05744944.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259170006|gb|EEW54501.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 488

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 17/169 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + V G++L +           K   A+    I  ++  G+P +VL    Y        
Sbjct: 303 VLALVFGLILGVLGV-----MQSKVANAISSTVI--YIFRGIPMIVLAFFIY-------- 347

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G  N IG     P F++  + L     A+I  IV+ G  AV  GQ EAA +LGL +RKA
Sbjct: 348 MGLPNVIGHKV--PLFLAGVVTLMLDEGAYIGAIVKGGFNAVDPGQWEAARSLGLPYRKA 405

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
              V+ PQ ++ ++P L +Q++  LK++S+  A+G  +L   G  II+Q
Sbjct: 406 LIKVVAPQGIKIMVPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQ 454


>gi|317052939|ref|YP_004119293.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953266|gb|ADU72737.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 221

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 12/146 (8%)

Query: 234 TLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           T VLI L +  ++  PVL   QF+  G +          +AL+ YTAA+ +EI R+GL +
Sbjct: 67  TPVLIQLIW-FYYAFPVLVGIQFSTFGAAA---------LALTLYTAAYSSEIFRAGLQS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ E A ALG++   A R ++LPQ  R ++P LT++ + L K +SLA  +   +L+ 
Sbjct: 117 IERGQWEGAKALGMSRPVALRRIILPQVFRRMLPALTNRMIELAKVTSLASILTVNELMY 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSL 377
            G  + +   + +EI+ +   +Y  L
Sbjct: 177 QGRLLSSTYYRPVEILTVVALLYFVL 202



 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            TIIG ++G  R ++ + +  I R  VEVFRN P L+ + + Y
Sbjct: 35  GTIIGLILGMARTNSRRWIMVITRSVVEVFRNTPVLIQLIWFY 77


>gi|258645925|ref|ZP_05733394.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403294|gb|EEW96841.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 225

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 15/189 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  +I + S +  ++  LF T L      +  K +   Y+    I  +P LVL+ + Y  
Sbjct: 24  TTVEISLLSVIGSVIFGLF-TGLFMTLQNRAAKLISRFYLEFIRI--MPQLVLLFIAY-- 78

Query: 245 HFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F       +S   F +  I    + AA + ++VR  LI++P+ Q E+A AL
Sbjct: 79  ---------FGITRAFGISLSGFTASVIVFILWGAAEMGDLVRGALISIPKSQYESAEAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+ R+  R +++PQ++R ++PP  + +  ++K +SL V +G  +++  G  II      
Sbjct: 130 GLSRRQMYRFIIIPQSLRRLLPPAINLFTRIIKTTSLVVLIGVVEMLKTGQQIIEANRYT 189

Query: 364 IEIILIWMF 372
                +W++
Sbjct: 190 APDAALWIY 198


>gi|226324098|ref|ZP_03799616.1| hypothetical protein COPCOM_01876 [Coprococcus comes ATCC 27758]
 gi|225207647|gb|EEG90001.1| hypothetical protein COPCOM_01876 [Coprococcus comes ATCC 27758]
          Length = 247

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 103/187 (55%), Gaps = 12/187 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGST-----VSPEFMSLY 270
           K L  +YIS  +I G P LV +   Y  +F  P+L ++ NF  G+      V+P  +  +
Sbjct: 54  KQLVSIYIS--VIRGTPILVQL---YVTYFGIPMLLKYINFKCGTNYNVNGVAP-IVYAF 107

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   +AF AEI+R+ L +V +GQ+EAA ALG+ + +A   ++LP+A+   +P L + 
Sbjct: 108 VALALNESAFNAEIIRASLESVDKGQVEAASALGMNYFQALIRIILPEAIVVALPSLGNA 167

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K +SLA      ++ + G  +  +  +  E+ +    IY  ++ ++   ++ L  
Sbjct: 168 FIGLIKGTSLAFVCSVVEMTAEGKILAGRNYRYFEVYISLAIIYWVITFVLERVISYLEK 227

Query: 391 KIALKEK 397
           K+ + E 
Sbjct: 228 KLRVPED 234


>gi|260461008|ref|ZP_05809257.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033042|gb|EEW34304.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 221

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 68/111 (61%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+  +ALS +  A+  EI+R+G+ A+P GQ+EAA +LGL   +  R V+L  A R++ P 
Sbjct: 91  MAAVVALSIHLGAYATEILRAGIEAIPEGQIEAAKSLGLGRYRIIRHVVLVPAARAVYPS 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           L++Q++  +  +S+  A+   +L +V   ++ QT ++ E+ ++   IY  L
Sbjct: 151 LSAQFILQIMGTSIVGAIAAEELTAVANNLVMQTFRSFEVYIVIAIIYFVL 201



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA   ++  T IG L   GR    + ++W    YVE+ RN P L+ ++F+
Sbjct: 17  LLRGLEKTIQLAALSILFGTAIGILGAVGRSFGPRFLSWTIAAYVELIRNTPLLIQLYFV 76

Query: 149 YKSV 152
           + S+
Sbjct: 77  FFSL 80


>gi|254994369|ref|ZP_05276559.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J2-064]
          Length = 235

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 15/196 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I ++L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGMTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMI 381
             +    IY  L+I+I
Sbjct: 201 AFIGAALIYWFLTILI 216


>gi|239833764|ref|ZP_04682092.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Ochrobactrum intermedium LMG 3301]
 gi|239821827|gb|EEQ93396.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Ochrobactrum intermedium LMG 3301]
          Length = 230

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 93/186 (50%), Gaps = 28/186 (15%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           T+T+   A  F  + VLG+V +L    L R               S + I   PT V++ 
Sbjct: 28  TVTLKAAATGFAIALVLGLVFAL----LRR---------------SPYKIISWPTTVVV- 67

Query: 240 LKYQLHFDKPVLGQFNFIGG-----STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              +   D P+L Q  F+         V P F++  +AL    +A+ +E+ R G+ A+PR
Sbjct: 68  ---EFLRDTPLLVQLFFLYYVLPVYGIVLPAFLTGALALGLQYSAYTSEVYRGGIEAIPR 124

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA AL LT  +  R +++PQA+  IIP + +  +++LK + +   V   D++++  
Sbjct: 125 GQWEAARALNLTPWRTYRDIVIPQAIPRIIPAMGNYLVSMLKETPVLSVVSIVDMLNLAN 184

Query: 355 TIINQT 360
            I ++T
Sbjct: 185 LIGDRT 190



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 80  TSDSSYATAIL----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +S  S+A +IL    +G   T   A +G   A ++G +    R S  K+++W   V VE 
Sbjct: 10  SSTLSFAISILPILAIGLTVTLKAAATGFAIALVLGLVFALLRRSPYKIISWPTTVVVEF 69

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
            R+ P LV +FFLY     VLP+  + IVLP
Sbjct: 70  LRDTPLLVQLFFLYY----VLPV--YGIVLP 94


>gi|153011888|ref|YP_001373101.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563776|gb|ABS17272.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 222

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP FM + I L     AF  E  R+ + ++P  Q +A +ALGL     TR ++LPQA+R+
Sbjct: 88  SPVFMGVLI-LGMNQTAFNGEAFRAAIQSIPAAQRDAGVALGLGRWNYTRYIVLPQAIRT 146

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI--- 379
             P L +  + + + SSL   VG ADL+  G  +  QT + IE        YL ++I   
Sbjct: 147 ATPVLITNAIGIFQQSSLVALVGVADLMYQGKQLSTQTYRPIETFTFLAAFYLVVAIPFG 206

Query: 380 -MIALFMNRLN 389
            + A F +RL 
Sbjct: 207 RLAAFFEHRLE 217


>gi|319780067|ref|YP_004139543.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317165955|gb|ADV09493.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 269

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 6/172 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ + L Y  +    +  Q+ +I  S + P     +    +AL+   A +  E
Sbjct: 98  VIRGTPLLIQLWLLY--YGLGSLFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGE 155

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R     VP+GQ+EAA A G++  KA R + LPQA+   +P LT + +  LK++ L   
Sbjct: 156 VMRGAFAGVPKGQLEAARAFGMSRWKAFRRIWLPQAIYRALPTLTGETVLQLKSTPLVAT 215

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   D+ +V   +   T    E +L+   IY++++ ++    +R+ A+I  K
Sbjct: 216 ISVIDIFAVSSKVRQDTYLTYEPLLLLALIYMTITGILVFAFSRIEARIPNK 267


>gi|300856061|ref|YP_003781045.1| putative amino acid ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300436176|gb|ADK15943.1| predicted ABC-type aminoacid transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 221

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 35/239 (14%)

Query: 160 DHSIVLPFGMF-LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           D +I   F MF +  RGL    +T++       FS +LG V++ F     R+++    K 
Sbjct: 2   DFNIEYFFSMFPVILRGL---PITVEVAGASLFFSVILGFVIAAF-----RYYNIPMLKQ 53

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN--FIGGSTVS------PEFMSLY 270
           L  +++S F                     P + Q    + G + VS      P F +  
Sbjct: 54  LSTVFVSFFR------------------STPFIAQLFVFYYGIAQVSKLVKNMPSFWATI 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS   AA+++E +R  + +V +GQ EA I++GL+  +    +++PQA+R  IP + + 
Sbjct: 96  IVLSLSFAAYMSEDIRGAITSVDKGQFEAGISIGLSSWQTVYRIIIPQAVRVAIPGMMNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + NL K++SL   VG  D+++      N + + +E  +  + IY  +   I+   +RL 
Sbjct: 156 FANLFKSTSLCFIVGLKDMIAYCKNEANVSFRYLEGYMAVLIIYWIILSSISYLQSRLE 214


>gi|171740988|ref|ZP_02916795.1| hypothetical protein BIFDEN_00050 [Bifidobacterium dentium ATCC
           27678]
 gi|283455623|ref|YP_003360187.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|171276602|gb|EDT44263.1| hypothetical protein BIFDEN_00050 [Bifidobacterium dentium ATCC
           27678]
 gi|283102257|gb|ADB09363.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
          Length = 220

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SFV+G+ L++ A  L R       + +   Y+  F   G P LV +   + + F  P +G
Sbjct: 31  SFVVGLALAI-AVALVRVAKVPVIQRIAQFYVWVFR--GTPLLVQL---FVIFFGLPSVG 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V P F S  IA S    A+ +E +R  ++AVP+GQ+EA +   L +    R
Sbjct: 85  --------IVVPAFPSAIIAFSLNVGAYASETLRGAILAVPKGQIEAGLTTNLNYLTIMR 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L++LPQA +S  P L + +++L+K++SLA  +  A++      I+  T + + +      
Sbjct: 137 LIVLPQAFKSAFPALFNTFISLVKDTSLAANITVAEMFMAAQRIVATTYEPLVLYCEVGL 196

Query: 373 IYLS 376
           IYL+
Sbjct: 197 IYLA 200


>gi|116072944|ref|ZP_01470206.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. RS9916]
 gi|116068249|gb|EAU74001.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. RS9916]
          Length = 340

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 8/98 (8%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR GL ++P  Q EAA ALGL+  ++ RLV+LPQA+R  IP LT+Q + LL+N+SL  
Sbjct: 220 EDVRGGLQSIPSTQTEAAAALGLSPIQSLRLVVLPQALRIAIPALTNQAIGLLQNTSLMA 279

Query: 343 AVGFADLVSVGGTIINQT---GQAIEII-----LIWMF 372
            +G  +L+ +G +++      G+ +E+      L WMF
Sbjct: 280 LLGLVELLGIGRSLLANPAFIGRHLEVYVWLGGLYWMF 317


>gi|37676942|ref|NP_937338.1| arginine transporter permease subunit ArtQ [Vibrio vulnificus
           YJ016]
 gi|37201486|dbj|BAC97308.1| ABC-type arginine transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 229

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 1/130 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  IALS   A++ ++ +R  L AV +GQ EAA ALG++  +    ++LPQA+R
Sbjct: 87  VSP-FLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLVT 205

Query: 382 ALFMNRLNAK 391
              +  ++AK
Sbjct: 206 QRVVKIIDAK 215


>gi|116670530|ref|YP_831463.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116610639|gb|ABK03363.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 262

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 5/132 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   +A+I EI R+G+ +V RGQ EA  ALG+++ K+  LV++PQ +R ++P L +Q
Sbjct: 106 IALSLIASAYIGEIFRAGIQSVDRGQGEACRALGMSYAKSMALVVVPQGIRRVLPALVNQ 165

Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K+SSL   +G      +L  VG      +G    +++  +F YL +++ +   +N
Sbjct: 166 FIAIVKDSSLVYFLGLLVTERELFRVGQDAAVLSGNLSPLVMAGIF-YLIITVPLTHLVN 224

Query: 387 RLNAKIALKEKK 398
             +++     ++
Sbjct: 225 YFDSRFRTGRRR 236


>gi|46908517|ref|YP_014906.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b F2365]
 gi|47092445|ref|ZP_00230235.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|254825078|ref|ZP_05230079.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254854299|ref|ZP_05243647.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|254933325|ref|ZP_05266684.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|300763905|ref|ZP_07073901.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|46881789|gb|AAT05083.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019222|gb|EAL09965.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|258607691|gb|EEW20299.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293584886|gb|EFF96918.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|293594321|gb|EFG02082.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300515246|gb|EFK42297.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|328465382|gb|EGF36629.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 1816]
 gi|328471566|gb|EGF42446.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 220]
          Length = 235

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I ++L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGMTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|329766946|ref|ZP_08258474.1| hypothetical protein HMPREF0428_00171 [Gemella haemolysans M341]
 gi|328837671|gb|EGF87296.1| hypothetical protein HMPREF0428_00171 [Gemella haemolysans M341]
          Length = 214

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 57/92 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G+ ++P+GQ EAA  L  T  +  R V+LPQ ++ ++P + ++
Sbjct: 89  IAFTLNYAAYFAEIFRGGIDSIPKGQYEAAKVLKFTQFQTIRFVILPQVIKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            ++L+K++SL  A+G +DL+    T  N+   
Sbjct: 149 IMSLVKDTSLVYALGISDLILASRTAANRDAS 180


>gi|326384496|ref|ZP_08206176.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196841|gb|EGD54035.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 227

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 9/99 (9%)

Query: 259 GSTVSPE---------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G T++PE         F    +A   YTA F+ E +RSG   VP GQ EAA +LGL+  +
Sbjct: 80  GLTLAPENSSFIATNNFRLAVLAFILYTATFVCETLRSGFNTVPIGQAEAARSLGLSFTQ 139

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
              L++LPQA+R++I PL S  + L KN+++A  +G A+
Sbjct: 140 VFGLIVLPQALRTVIAPLGSVLIALTKNTTIASVIGVAE 178


>gi|170741315|ref|YP_001769970.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168195589|gb|ACA17536.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 227

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+    A+  EIVR+GL A+PRGQ+EAA  L L+  +  R V+L  A+  + P LTSQ
Sbjct: 95  LALTINVGAYTTEIVRAGLDAIPRGQIEAAEGLALSRAQIYRHVVLLPAIERVYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           ++ L+  SS+   +   +L +V   I + T +A E  ++   IY++LS IM A F
Sbjct: 155 FVLLMLASSVTSQISAEELTAVANYIQSDTYRAFETYIVVALIYVALSFIMRAGF 209



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 99  LAFSGMIPATIIGTLVGA----GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L  SG+  AT +G  +G     GR S +  +  +C VYVE  RN P LV IF +Y
Sbjct: 25  LELSGI--ATAVGGALGGITAIGRRSRHAALRRLCEVYVEAIRNTPLLVQIFLVY 77


>gi|257387737|ref|YP_003177510.1| polar amino acid ABC transporter inner membrane subunit
           [Halomicrobium mukohataei DSM 12286]
 gi|257170044|gb|ACV47803.1| polar amino acid ABC transporter, inner membrane subunit
           [Halomicrobium mukohataei DSM 12286]
          Length = 338

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 111/207 (53%), Gaps = 12/207 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG+ +++    ++R +  +    + L Y  T L+ G P   L+A  + L++  P+  
Sbjct: 130 SMVLGLAIAV-PLSVARVYGGRIVGTVSLAY--TELVRGTP---LLAQLFLLYYGLPLAE 183

Query: 253 QFNFIG--GSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           +   +G  G    P   ++++A+  +T   +A+ AE +R  L +V  GQ+ AA ++GL+ 
Sbjct: 184 EIEGLGLVGEGAVPR-AAVFVAIVGFTINSSAYQAEYIRGALQSVDSGQLVAARSIGLSK 242

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R V+LPQ +R  IP  T++++ L+K SSLA  +   +L      I + + +  +  
Sbjct: 243 AAGIRHVVLPQGLRYAIPGWTNEFVYLIKYSSLAAFITVPELFRQARIIASDSFRVTDTY 302

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++   +YL+L +  AL M+RL A +A+
Sbjct: 303 VVVAVLYLALVLTTALAMDRLEAAVAV 329


>gi|170748628|ref|YP_001754888.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170655150|gb|ACB24205.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 231

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 59/97 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  ALS    A+++  V SG+ +V RGQ EA +ALGL   +  R V+LPQA+R++
Sbjct: 94  PEAGTVAAALSLVGGAYLSYGVASGIASVGRGQWEAGLALGLGPWRTLRFVILPQALRAM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            P   +Q+  L+K++SLA  +G  +L  V   + N+ 
Sbjct: 154 APSFVNQWTTLIKDTSLAYVIGVPELSFVAAQVNNRA 190


>gi|290473509|ref|YP_003466378.1| putative amino acid ABC transporter membrane protein [Xenorhabdus
           bovienii SS-2004]
 gi|289172811|emb|CBJ79582.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Xenorhabdus bovienii SS-2004]
          Length = 250

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 14/172 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LGI L  F   L R +  K   A+   Y+  +LI G P LV + L   + +  P +G
Sbjct: 46  TFALGISLG-FIVALIRLYGSKPLVAVVRFYV--WLIRGTPLLVQLFL---IFYALPSVG 99

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                        F S  I  +    A+ +E++R+ LI+VP+GQ EA+ ++G++  ++ R
Sbjct: 100 --------ITLEAFTSAVIGFTLNVGAYTSEVIRAALISVPKGQWEASHSIGMSWWQSLR 151

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            ++LPQA R  IPPL++ +++L+K++SLA  +   ++      I   T Q +
Sbjct: 152 RIVLPQAARVSIPPLSNTFISLVKDTSLASVITVPEMFLAAQRIAAVTYQPL 203


>gi|289671885|ref|ZP_06492775.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 306

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249
           FS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D  
Sbjct: 74  FSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 126

Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           VLG    Q  F   STV    +F    + LS   +A+ AEI+R GLI V  GQ EAA AL
Sbjct: 127 VLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAAL 186

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   
Sbjct: 187 GLPVSRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 246

Query: 364 IEIILIWMFIYL 375
           I ++++    YL
Sbjct: 247 IPLLIVATVWYL 258


>gi|260430199|ref|ZP_05784173.1| ABC transporter permease protein [Citreicella sp. SE45]
 gi|260418671|gb|EEX11927.1| ABC transporter permease protein [Citreicella sp. SE45]
          Length = 221

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 8/158 (5%)

Query: 243 QLHFDKPVLGQ-------FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L  D PVL Q       F  + G  +SP   +L + L+  T+A+ +EI R G+ ++ RG
Sbjct: 62  ELFRDTPVLIQLIWFYYAFPILVGVQLSPYAAAL-LGLTLNTSAYASEIFRGGIRSIHRG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A+A+G++  +A R V+LPQ ++ ++   T++ + + K SSLA  +   +L+  G  
Sbjct: 121 QMEGALAIGMSRAQAMRRVILPQVIKRMLAAFTNRTIEVAKMSSLASVISVHELMYQGRL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +   +  EI+    FIY  L         RL   +A
Sbjct: 181 LSSTYYRPFEILTAVAFIYFVLIYPGTFLAGRLEKHLA 218


>gi|222086405|ref|YP_002544939.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723853|gb|ACM27009.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 219

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)

Query: 227 FLIFGLPTLVLIALKY--QLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTA 278
           FL  G   +  IA+KY  +L    P+L Q    F G    G  V P +++  +AL  +++
Sbjct: 40  FLRIGKNKVARIAVKYFVELFQGTPLLMQLFLAFFGLGLFGIDV-PAWLAAAVALILWSS 98

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF+ EI R  + AV +GQ EA+ +L + + +  R V+LPQA+R  +PP     + ++K +
Sbjct: 99  AFLIEIWRGCVEAVAKGQWEASASLAMGYMQQMRYVILPQALRIAVPPTVGFSVQVVKGT 158

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +GF +L   G  I N T Q   +      IY +L 
Sbjct: 159 ALTSIIGFVELSKAGTIITNATFQPFTVYGFVALIYFALC 198


>gi|153010123|ref|YP_001371337.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562011|gb|ABS15508.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 510

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 7/144 (4%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL+   Y L    PVL        + +S  F +  IAL     A++AEI R GL+A
Sbjct: 67  LPLLVLLIFIYSLPQVFPVLR-------TLLSNAFAAGLIALVISETAYMAEIHRGGLLA 119

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ+EA  ALGL+     RL+++PQA+R  +P ++++ + ++K +SL   +  A+++ 
Sbjct: 120 IHKGQIEAGRALGLSFLGIQRLIVVPQAIRVSLPAMSNELVTIVKLTSLVSVISLAEILL 179

Query: 352 VGGTIINQTGQAIEIILIWMFIYL 375
           VG  +  Q    +E + +  F Y+
Sbjct: 180 VGQRLYTQNFLVLETLTVVAFFYV 203


>gi|325528178|gb|EGD05363.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 500

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 4/137 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F +  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR
Sbjct: 163 ISP-FAAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTVRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L+  
Sbjct: 222 AILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTAL 281

Query: 379 IMIALFMNRLNAKIALK 395
             I + + R  A+ AL+
Sbjct: 282 SAIQVQIERHYARGALR 298


>gi|259046528|ref|ZP_05736929.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Granulicatella
           adiacens ATCC 49175]
 gi|259036693|gb|EEW37948.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Granulicatella
           adiacens ATCC 49175]
          Length = 259

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +   F +++I +S  T A+++EIVR G+I++ +GQ EA+ A+G+TH +  R V+ PQ
Sbjct: 95  GINLDVTFAAIFI-VSINTGAYMSEIVRGGIISIDQGQFEASQAIGMTHWQTMRYVVFPQ 153

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            +R+I+P + ++++  +K++S+   +  ++L     T+  Q  +  +   + + +Y  ++
Sbjct: 154 VLRNILPAVGNEFVINIKDTSVLNVISVSELYFATKTVAGQNFRYFDTFFVTLILYFIMT 213

Query: 379 IMIALFMNRLNAKI 392
             +   +     K+
Sbjct: 214 FTVTRILRYFERKL 227


>gi|322411344|gb|EFY02252.1| hypothetical protein SDD27957_02870 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 215

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV  GQ EA ++ G TH +  RL++ PQA R ++P + SQ+
Sbjct: 87  AFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFTHFQVFRLIIFPQAFRKMLPAIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 147 VTVIKDTSLLYSV 159


>gi|317049797|ref|YP_004117445.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951414|gb|ADU70889.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 366

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 220 FMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQILVI 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQA++  IP L +  + L K++SL + +G  DL S
Sbjct: 280 LPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFS 315


>gi|172063855|ref|YP_001811506.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171996372|gb|ACB67290.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 225

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y  T  + G+P  +++ + Y   F    L    F G   +SP F +  IAL+    A+ +
Sbjct: 52  YALTNFLRGIPEFLILLICY---FGLSHLLNAQFDGAIVISP-FSAGVIALAVVFGAYSS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R   IAVP GQ+EAA A G+T  +    V LPQA R  +P L + + NLLK++SL  
Sbjct: 108 EMFRGAFIAVPAGQIEAARAYGMTRLQTLWYVRLPQAWRICLPSLNNMWQNLLKDTSLVS 167

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 168 IVGLEDML 175


>gi|223983007|ref|ZP_03633216.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM
           12042]
 gi|223965053|gb|EEF69356.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM
           12042]
          Length = 519

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 58/77 (75%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           ++  + IAL   ++A++AEI+RSG+ AV +GQ EAA +LG+++R     ++LPQA+++I+
Sbjct: 388 KYACVVIALVFNSSAYVAEIIRSGIQAVDKGQSEAAKSLGMSNRHMMMKIILPQAVKNIL 447

Query: 325 PPLTSQYLNLLKNSSLA 341
           P L ++++ ++K +SLA
Sbjct: 448 PALGNEFVTMIKETSLA 464


>gi|300690980|ref|YP_003751975.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Ralstonia solanacearum PSI07]
 gi|299078040|emb|CBJ50682.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Ralstonia solanacearum PSI07]
          Length = 218

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 60/101 (59%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR   ++VPRG  EA +ALG+   +    V+ P A+R + PPL +Q++  LK
Sbjct: 100 SGAYIAEIVRGAFLSVPRGLKEAGLALGMPAWRVLAFVIGPVALRRMTPPLGNQFIVSLK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           ++SL + +G  +L   G  I+    +A+EI      IYL +
Sbjct: 160 DTSLFIVIGVGELTRQGQEIMASNFRAVEIWSAVAVIYLCM 200


>gi|319762274|ref|YP_004126211.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330825796|ref|YP_004389099.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317116835|gb|ADU99323.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329311168|gb|AEB85583.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 266

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 68/116 (58%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA +AE+ R+G++AVPRGQ +AA +LGLT  +   LV+ PQA+R I+P L +Q + ++K
Sbjct: 150 TAAVVAEVYRAGVLAVPRGQTDAARSLGLTEAQVFFLVVFPQALRYIVPALVAQLVIVVK 209

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +++    V + +L+     +I      + + L+   +Y  ++  I+    RL   +
Sbjct: 210 DTTFGYVVTYGELMQNAKVLIANYHALVPVYLVVAALYCLVNYAISRASKRLGGPM 265


>gi|320333845|ref|YP_004170556.1| polar amino acid ABC transporter inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
 gi|319755134|gb|ADV66891.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
          Length = 219

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 105/211 (49%), Gaps = 16/211 (7%)

Query: 185 TNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T A+I V   V  ++L L   F   L R       + L  LY+S   I G P LV I   
Sbjct: 16  TGARITVLYAVGAMLLGLPLAFLVALGRSAPWPPVRWLLDLYVS--FIRGTPLLVQI--- 70

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + L++  P LG        T+ P   S   ALS   AA+++  +R+ L AV RGQ EAA 
Sbjct: 71  FVLYYGLPGLG-------VTLDP-VTSGVAALSLNVAAYMSVTIRASLDAVGRGQREAAR 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+  +  R V+LPQA+R  +P L +  + L+K++SL   +   +L+     +I +T 
Sbjct: 123 SLGLSSSQTMRFVVLPQALRIGLPSLMNSLIGLIKDTSLVSVITVTELLRSAQLVIARTF 182

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +     L    IY  +S ++ L  +RL  ++
Sbjct: 183 EPFGPYLAAALIYWLISSLLGLVQSRLERRL 213


>gi|256957248|ref|ZP_05561419.1| amino acid ABC transporter [Enterococcus faecalis DS5]
 gi|257077778|ref|ZP_05572139.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           faecalis JH1]
 gi|294781304|ref|ZP_06746650.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|307267969|ref|ZP_07549357.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|256947744|gb|EEU64376.1| amino acid ABC transporter [Enterococcus faecalis DS5]
 gi|256985808|gb|EEU73110.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           faecalis JH1]
 gi|294451640|gb|EFG20096.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|306515610|gb|EFM84137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|315032477|gb|EFT44409.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034288|gb|EFT46220.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|323480074|gb|ADX79513.1| his/Glu/Gln/Arg/opine amino ABC transporter [Enterococcus faecalis
           62]
          Length = 487

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 72/112 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  + A++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++ ++K SS+   +G ++L+   G +   + +     LI   IY  L+  I+
Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ DQ  +       Y    L G   T +LAF G++   I+G L+   +L+ +K++  I 
Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324

Query: 130 RVYVEVFRNIPPLVVIFFLY 149
             Y+E  R  P LV IF +Y
Sbjct: 325 IAYIEYVRGTPLLVQIFIVY 344


>gi|154483128|ref|ZP_02025576.1| hypothetical protein EUBVEN_00829 [Eubacterium ventriosum ATCC
           27560]
 gi|149735936|gb|EDM51822.1| hypothetical protein EUBVEN_00829 [Eubacterium ventriosum ATCC
           27560]
          Length = 229

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 24/233 (10%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +P  M L    L      M    KIFV    FS   G+V++    R+SR    K  K L 
Sbjct: 14  MPMNMMLEKMSLG-----MIETVKIFVLTLLFSLPFGLVVAW--GRMSRI---KIVKWLV 63

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YIS  ++ G P ++ +     ++F    L +       +    F ++ I+     AA+
Sbjct: 64  NIYIS--IMRGTPLMLQVM---AIYFGPSYLLKIQI----SRDYRFYAVIISFVLNYAAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI RSG+ ++PRGQ EAA  LG    +    ++LPQ ++ I+P +T++ + L+K++SL
Sbjct: 115 FAEIYRSGIESMPRGQYEAANMLGYNKAQTFMKIILPQVIKRILPSITNEVICLVKDTSL 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A ++ + ++ S+   I + T       +  +F Y   + ++A  M  +  K++
Sbjct: 175 AFSIAYMEMFSIAKQIASSTSSLTPFFVAGVF-YFVFNALVAWIMGLIEKKLS 226


>gi|315145819|gb|EFT89835.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 487

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 72/112 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  + A++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++ ++K SS+   +G ++L+   G +   + +     LI   IY  L+  I+
Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G   T +LAF G++   I+G L+   +L+ +K++  I   Y+E  R  P L
Sbjct: 278 QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIAIAYIEYVRGTPLL 337

Query: 143 VVIFFLY 149
           V IF +Y
Sbjct: 338 VQIFIVY 344


>gi|325067175|ref|ZP_08125848.1| amino acid ABC transporter membrane protein [Actinomyces oris K20]
 gi|326771648|ref|ZP_08230933.1| glutamate permease [Actinomyces viscosus C505]
 gi|326637781|gb|EGE38682.1| glutamate permease [Actinomyces viscosus C505]
          Length = 218

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 66/115 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F S+ +AL   ++ F+ E VRSG+ +VP+GQ+EAA ALG+      R ++LPQA+   
Sbjct: 82  PLFWSVIVALVFSSSGFVCETVRSGINSVPKGQIEAARALGMPFGLIIRGIVLPQALART 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           I PL + ++  L  SSLA A+G  +L +V   I  +    +   L     YL+++
Sbjct: 142 IQPLVNIFIACLIGSSLAAAIGVVELTAVTQRINQERAAGVITFLTSGLTYLAIA 196


>gi|269795725|ref|YP_003315180.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
 gi|269097910|gb|ACZ22346.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
          Length = 285

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 92/177 (51%), Gaps = 22/177 (12%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIAL 240
           T+   A  F     LGIVL+L   +LS        + L   YI  F   G+P L V+IA 
Sbjct: 80  TLTYTAAAFAVGLSLGIVLALM--KLS---SVGVYRWLATAYIEFFR--GIPALLVVIAF 132

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +              G ++    +   +AL   +AA+IAE +R+G+ AVP GQ+EAA
Sbjct: 133 AYAVPIAL----------GVSIPSLTLKAALALGMVSAAYIAETLRAGIEAVPPGQIEAA 182

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVG 353
            +LG++H +    V++PQA R ++PP+T++ + L K++SL   +G      DL  +G
Sbjct: 183 RSLGMSHSRTLVTVVIPQAFRIVLPPMTNEIILLTKDTSLIYLMGLLPTQFDLTKIG 239


>gi|227530661|ref|ZP_03960710.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus vaginalis ATCC 49540]
 gi|227349442|gb|EEJ39733.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus vaginalis ATCC 49540]
          Length = 225

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 20/213 (9%)

Query: 185 TNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           T+  I V S  +G++L ++F   L R    +  + + LLY+  F I  +PT+VL+ L Y 
Sbjct: 24  TSVWIAVVSLAIGLLLGTIFG--LLRTLPSRIIRFILLLYLEFFRI--VPTVVLLFLVYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +  QFN      +   +M++ +A S + AA  ++IVR  L +VP+ Q E+ +AL
Sbjct: 80  I-----LPRQFNV----NLPATWMAV-LAFSLWVAAEFSDIVRGALESVPKHQRESGLAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R VLLPQA++  +P   +    ++K +SL + +   D+++VG  II    Q 
Sbjct: 130 GLNQWQLFRYVLLPQAIQLELPATINLATRVIKTTSLLLMISVMDVINVGQQIIEANNQT 189

Query: 364 IEIILIWMF-----IYLSLSIMIALFMNRLNAK 391
               + W++     +Y  +   ++L+   L AK
Sbjct: 190 HPTGIFWVYGLIFILYFIVDYPLSLWAKHLTAK 222


>gi|227517812|ref|ZP_03947861.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229546739|ref|ZP_04435464.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229548830|ref|ZP_04437555.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|255971345|ref|ZP_05421931.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|256617763|ref|ZP_05474609.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200]
 gi|256761649|ref|ZP_05502229.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256854261|ref|ZP_05559625.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256960019|ref|ZP_05564190.1| arpJ [Enterococcus faecalis Merz96]
 gi|256964286|ref|ZP_05568457.1| arpJ [Enterococcus faecalis HIP11704]
 gi|257081138|ref|ZP_05575499.1| amino acid-binding/permease [Enterococcus faecalis E1Sol]
 gi|257083807|ref|ZP_05578168.1| amino acid ABC transporter [Enterococcus faecalis Fly1]
 gi|257089304|ref|ZP_05583665.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257415457|ref|ZP_05592451.1| arpJ [Enterococcus faecalis AR01/DG]
 gi|257421139|ref|ZP_05598129.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293383772|ref|ZP_06629679.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|293388752|ref|ZP_06633245.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|300860123|ref|ZP_07106211.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307271893|ref|ZP_07553161.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307275311|ref|ZP_07556454.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307290910|ref|ZP_07570800.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312901565|ref|ZP_07760838.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312904453|ref|ZP_07763612.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312907012|ref|ZP_07766008.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312952839|ref|ZP_07771701.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|312978730|ref|ZP_07790457.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|227074736|gb|EEI12699.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229306059|gb|EEN72055.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229308088|gb|EEN74075.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|255962363|gb|EET94839.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|256597290|gb|EEU16466.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200]
 gi|256682900|gb|EEU22595.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256709821|gb|EEU24865.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256950515|gb|EEU67147.1| arpJ [Enterococcus faecalis Merz96]
 gi|256954782|gb|EEU71414.1| arpJ [Enterococcus faecalis HIP11704]
 gi|256989168|gb|EEU76470.1| amino acid-binding/permease [Enterococcus faecalis E1Sol]
 gi|256991837|gb|EEU79139.1| amino acid ABC transporter [Enterococcus faecalis Fly1]
 gi|256998116|gb|EEU84636.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257157285|gb|EEU87245.1| arpJ [Enterococcus faecalis ARO1/DG]
 gi|257162963|gb|EEU92923.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291078848|gb|EFE16212.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|291081909|gb|EFE18872.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|295113911|emb|CBL32548.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300850941|gb|EFK78690.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306497980|gb|EFM67507.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306507945|gb|EFM77072.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511399|gb|EFM80401.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|310626997|gb|EFQ10280.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310629355|gb|EFQ12638.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310632151|gb|EFQ15434.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311288437|gb|EFQ66993.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311291360|gb|EFQ69916.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315029764|gb|EFT41696.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315148051|gb|EFT92067.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315149654|gb|EFT93670.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315152966|gb|EFT96982.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315155197|gb|EFT99213.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315157525|gb|EFU01542.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315163047|gb|EFU07064.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315171996|gb|EFU16013.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315174863|gb|EFU18880.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315577324|gb|EFU89515.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|327534474|gb|AEA93308.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 487

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 72/112 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  + A++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++ ++K SS+   +G ++L+   G +   + +     LI   IY  L+  I+
Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ DQ  +       Y    L G   T +LAF G++   I+G L+   +L+ +K++  I 
Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324

Query: 130 RVYVEVFRNIPPLVVIFFLY 149
             Y+E  R  P LV IF +Y
Sbjct: 325 IAYIEYVRGTPLLVQIFIVY 344


>gi|218512654|ref|ZP_03509494.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 172

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 64/113 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ +++AF+ EI R G+ AVP GQ EAA ALGL +R     V+LPQA +  +P     
Sbjct: 57  IGLTAHSSAFLGEIWRGGIEAVPLGQTEAARALGLPYRHRMLDVVLPQAFKISLPATIGF 116

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            + L+K +SL   +GF +L   G  I N T Q + +  +   IY +L   ++L
Sbjct: 117 LVGLVKGTSLVAIIGFTELTRAGQIISNNTFQPLIVFGMVGAIYFALCWPLSL 169


>gi|261819590|ref|YP_003257696.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261603603|gb|ACX86089.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 221

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 18/200 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+F   LGI+++L      R +  K  K L   Y+  ++I G P LV + L +       
Sbjct: 31  FIFGLALGILIALV-----RLYGPKPLKWLGDFYV--WVIRGTPLLVQLFLIF------- 76

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               +           F +  I  +    A+ +EIVR  +++VP+GQ  AA +LG+  R+
Sbjct: 77  ----YGLPSAGITLDAFPAALIGFTVSVGAYSSEIVRGAILSVPKGQWSAAYSLGMNGRQ 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+ PQ++   +PPL++ +++L+K++SLA  +   ++      I++ T + + + + 
Sbjct: 133 AIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSVTYEPLILYVE 192

Query: 370 WMFIYLSLSIMIALFMNRLN 389
              IYL  S +++    +L 
Sbjct: 193 AALIYLMFSTVLSQLQVKLE 212


>gi|148976101|ref|ZP_01812844.1| arginine transporter permease subunit ArtQ [Vibrionales bacterium
           SWAT-3]
 gi|145964496|gb|EDK29750.1| arginine transporter permease subunit ArtQ [Vibrionales bacterium
           SWAT-3]
          Length = 228

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV +GQ EAA ALG+   +A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTIRGALKAVSKGQREAASALGIPQSRAFFRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGATDLLKQAQLTSAATHEAFTWYATAAAIYLIITLIT 205

Query: 382 ALFMNRLNAKIALK 395
              +  ++ K +++
Sbjct: 206 QRAVKVIDGKFSIQ 219


>gi|145641226|ref|ZP_01796806.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           R3021]
 gi|145274063|gb|EDK13929.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           22.4-21]
          Length = 221

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 15/210 (7%)

Query: 191 VFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFD 247
           V S +LG+ LSL FA   +  F    GK + +  +   L+ GLP ++++ L Y       
Sbjct: 21  VCSLILGLFLSLIFAALEANRF---VGKPMTVFVV---LLRGLPEIIVVLLVYFGSTELV 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           + + G++   G       F    +ALS   AA+ ++ +R  + A+P+GQ E+  ALGL+ 
Sbjct: 75  EMLTGEYIEFGA------FGCGVLALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSK 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
                 +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q     
Sbjct: 129 SYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I   IYL+++++  + + +L  +    E+
Sbjct: 189 GIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|254780172|ref|YP_003064585.1| general L-amino acid transport system permease protein [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039849|gb|ACT56645.1| general L-amino acid transport system permease protein [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 386

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 57/82 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S + +A+IAE++R GL ++ +GQ EAA +LGL++ +  RL+++PQ ++ +IP + + 
Sbjct: 254 LGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIMPQVIKRVIPGIVNT 313

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K+SSL   +   DL+ +
Sbjct: 314 FIGLFKDSSLISIINMFDLLGI 335


>gi|28900493|ref|NP_800148.1| arginine transporter permease subunit ArtQ [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260365646|ref|ZP_05778167.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus K5030]
 gi|260877446|ref|ZP_05889801.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus AN-5034]
 gi|260898927|ref|ZP_05907368.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus Peru-466]
 gi|260901239|ref|ZP_05909634.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus AQ4037]
 gi|28808873|dbj|BAC61981.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308089212|gb|EFO38907.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus Peru-466]
 gi|308090630|gb|EFO40325.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus AN-5034]
 gi|308106792|gb|EFO44332.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus AQ4037]
 gi|308111440|gb|EFO48980.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus K5030]
          Length = 229

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV RGQ EAA ALG++   A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQFHAFVRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLIT 205

Query: 382 ALFMNRLNAKIALK 395
              +  ++ K +++
Sbjct: 206 QRAVKVIDKKFSIQ 219


>gi|157828045|ref|YP_001494287.1| amino acid ABC transporter permease protein [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165932742|ref|YP_001649531.1| hypothetical protein RrIowa_0212 [Rickettsia rickettsii str. Iowa]
 gi|157800526|gb|ABV75779.1| amino acid ABC transporter permease protein [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165907829|gb|ABY72125.1| hypothetical protein RrIowa_0212 [Rickettsia rickettsii str. Iowa]
          Length = 218

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F  V+G++L++       A RL  +F+    +  PLL   + + F  P +  I +K+ +
Sbjct: 31  IFGLVIGMLLAICKVNKNHALRLFANFYTSIFRGTPLLIQLSIIYFASPYI--IGIKFSV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                FM+  IA S  + A+++E++R+G+ AV +GQ EAA AL 
Sbjct: 89  ---------------------FMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +     T+ ++LPQA+++I P L ++ +NL+K S++   +G  DL+
Sbjct: 128 IPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173


>gi|254422244|ref|ZP_05035962.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
 gi|196189733|gb|EDX84697.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
          Length = 531

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 58/82 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ ++AA++AE VR+GL +VP+GQ EAA +LGL       L++LPQA+++ IP +  Q
Sbjct: 402 IGLTIFSAAYLAENVRAGLQSVPQGQGEAAQSLGLNKPLTMALIVLPQALKTAIPAIVGQ 461

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           +++L ++++L   VG  +L+ +
Sbjct: 462 FISLFQDTTLLGIVGLLELLGI 483


>gi|70728646|ref|YP_258395.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68342945|gb|AAY90551.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 242

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 2/174 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L         F       ++P F +  I L     A+  E 
Sbjct: 67  TTLIRGVPDLVLMLLIFYSLQTWLTSFTDFMEWDYIEINP-FSAGVITLGFIYGAYFTET 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AVPRGQ+EAA A GL   +  R V+ PQ MR  +P + + ++ +LK ++L   +
Sbjct: 126 FRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATALVSII 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ADLV         T Q    +++   IYL ++      + RL  + A   ++
Sbjct: 186 GLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERRYAAGARE 239


>gi|331003782|ref|ZP_08327276.1| hypothetical protein HMPREF0491_02138 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412165|gb|EGG91560.1| hypothetical protein HMPREF0491_02138 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 216

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++P GQ EAA  LG +  +   +++LPQ ++ I+P +T++ + L+K+
Sbjct: 99  AAYFAEIYRSGIQSMPSGQYEAAKILGYSKSQTFFIIILPQVIKRILPSITNEVITLVKD 158

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +  A++ ++   + + T      +   +F Y+  + ++A  M+ +  K+
Sbjct: 159 TSLAFTISVAEMFTMAKALASSTTSMYPFVCAALFYYM-FNAIVAFVMDMIEKKL 212


>gi|166030980|ref|ZP_02233809.1| hypothetical protein DORFOR_00661 [Dorea formicigenerans ATCC
           27755]
 gi|166029247|gb|EDR48004.1| hypothetical protein DORFOR_00661 [Dorea formicigenerans ATCC
           27755]
          Length = 216

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 111/208 (53%), Gaps = 19/208 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   +FS  LG+++S    R+S++   K    +  LYIS  ++ G P ++ + + Y    
Sbjct: 22  AATLIFSLPLGLLISF--GRMSKN---KIISTIFKLYIS--VMRGTPLMLQLMVIY---- 70

Query: 247 DKPVLGQFNFIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                G F +I G  +S  +  M++ I      AA+ AEI R G+ ++P+GQ EAA  LG
Sbjct: 71  ----FGPF-YILGVQISQSWKNMAVAIGFVLNYAAYFAEIYRGGIESMPQGQYEAAKILG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +    ++LPQ ++ I+P +T++ + L+K++SLA  +G  ++ ++   + +     +
Sbjct: 126 YTKAQTFIRIILPQVIKRILPAITNETITLVKDTSLAFTIGVTEMFTMAKALASGQVSML 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 +F Y+ L++++A  M R+  K+
Sbjct: 186 PYAFAALFYYI-LNLVVAFIMERIEKKM 212



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 3/59 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP---PLVVIFF 147
           G V + W+  + +I +  +G L+  GR+S NK+++ I ++Y+ V R  P    L+VI+F
Sbjct: 13  GMVTSLWIFAATLIFSLPLGLLISFGRMSKNKIISTIFKLYISVMRGTPLMLQLMVIYF 71


>gi|29375478|ref|NP_814632.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227555005|ref|ZP_03985052.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|255973964|ref|ZP_05424550.1| amino acid ABC transporter [Enterococcus faecalis T2]
 gi|257086232|ref|ZP_05580593.1| amino acid ABC transporter [Enterococcus faecalis D6]
 gi|257418488|ref|ZP_05595482.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|307278411|ref|ZP_07559486.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307286701|ref|ZP_07566787.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|29342938|gb|AAO80702.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227175864|gb|EEI56836.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|255966836|gb|EET97458.1| amino acid ABC transporter [Enterococcus faecalis T2]
 gi|256994262|gb|EEU81564.1| amino acid ABC transporter [Enterococcus faecalis D6]
 gi|257160316|gb|EEU90276.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|306502179|gb|EFM71463.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504917|gb|EFM74112.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|315027079|gb|EFT39011.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315165246|gb|EFU09263.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315167972|gb|EFU11989.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315574194|gb|EFU86385.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315581663|gb|EFU93854.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 487

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 72/112 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  + A++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++ ++K SS+   +G ++L+   G +   + +     LI   IY  L+  I+
Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ DQ  +       Y    L G   T +LAF G++   I+G L+   +L+ +K++  I 
Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324

Query: 130 RVYVEVFRNIPPLVVIFFLY 149
             Y+E  R  P LV IF +Y
Sbjct: 325 IAYIEYVRGTPLLVQIFIVY 344


>gi|283457666|ref|YP_003362251.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283133666|dbj|BAI64431.1| ABC-type amino acid transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 312

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 65/100 (65%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+++ I L+ Y  + IAE++RSG+  +PRGQ EA +A+GLT  +    +L+PQA  +++P
Sbjct: 151 FIAVVIGLTLYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPSQTLIQILIPQAFTAMMP 210

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + SQ++ +LK+++L   + + +L++    I +  G  ++
Sbjct: 211 SMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQ 250



 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           + E+   E ++    +T+  ++ +  L G  +T   A   ++ +   G L G  RLS  +
Sbjct: 51  MGEKGQLEPEKWTDLFTA-RAWTSYYLPGLASTLSAAAISVVTSIAFGLLFGIARLSQYR 109

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLY 149
           +  WI  V VE FR +P L+++ F +
Sbjct: 110 VFRWIGTVVVEFFRAVPVLIMMIFFW 135


>gi|320008165|gb|ADW03015.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 304

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 83/143 (58%), Gaps = 5/143 (3%)

Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +T++ E   LY     L  Y A+ +AEIVR+G++++PRGQ +AA A+G+   +  R VLL
Sbjct: 132 TTLATEDRLLYAVVTGLVLYNASVLAEIVRAGILSLPRGQTDAAKAIGMRKGQTMRYVLL 191

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLV-SVGGTIINQTGQAIEIILIWMFIY 374
           PQ++ +++P + SQ + ++K+++L  AV  F +L+ SV     N     I    I   IY
Sbjct: 192 PQSVTAMLPAIVSQIVVIVKDTALGGAVLTFPELLASVRPMSANYGANTIACFTIIALIY 251

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           ++L+  +  F + L  ++   +K
Sbjct: 252 MALNFALTSFASWLEGRLRRGKK 274



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 36/67 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +TS   + T I  G  NT   AF  ++ A  +G L G GRLS ++ +     V VE FR 
Sbjct: 55  FTSPQPWETYIWPGLQNTLKAAFFALLIALPLGALFGIGRLSDHRWMRMPSGVVVEFFRA 114

Query: 139 IPPLVVI 145
           IP L+++
Sbjct: 115 IPVLILM 121


>gi|167581947|ref|ZP_02374821.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 246

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V    LG+ L+L    L        G  +A+P+L +  +  F LP L        LH D 
Sbjct: 57  VLGVALGVALALATGALRGALIVVIGFFRAIPVLMLIFWTYFLLPVL--------LHADV 108

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L                ++  ALS    A++A  V +G+ A   GQ +A ++LGLT R
Sbjct: 109 PGLA---------------AVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRR 153

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +  R VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 QTVRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204


>gi|163857806|ref|YP_001632104.1| amino acid ABC transporter, permease protein [Bordetella petrii DSM
           12804]
 gi|163261534|emb|CAP43836.1| amino acid ABC transporter, permease protein [Bordetella petrii]
          Length = 230

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 56/83 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ +  A+++EIVR G+ +VPRGQ+E A A+G+  R+  R V+LPQA  + +PPL  Q
Sbjct: 101 VALTLHHTAYMSEIVRVGIQSVPRGQIEGAKAVGMDFRQRLRYVVLPQAFANTLPPLLGQ 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVG 353
              L+K++SL   +   +LV+ G
Sbjct: 161 TAVLIKDTSLLSLIAVFELVAAG 183


>gi|330873993|gb|EGH08142.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 222

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 69/122 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +P L + 
Sbjct: 94  IGFSLNMAAYACEILRAAIGSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPSLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L A
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEA 213

Query: 391 KI 392
           ++
Sbjct: 214 RV 215



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 21/32 (65%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           RLS  KLV WI R+YV  FR  P LV +F +Y
Sbjct: 45  RLSRFKLVNWIARIYVSFFRGTPLLVQLFVIY 76


>gi|329577884|gb|EGG59305.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 487

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 72/112 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  + A++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 362 IALSLNSGAYVAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNE 421

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++ ++K SS+   +G ++L+   G +   + +     LI   IY  L+  I+
Sbjct: 422 FVTVIKESSVVSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTIS 473



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ DQ  +       Y    L G   T +LAF G++   I+G L+   +L+ +K++  I 
Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324

Query: 130 RVYVEVFRNIPPLVVIFFLY 149
             Y+E  R  P LV IF +Y
Sbjct: 325 IAYIEYVRGTPLLVQIFIVY 344


>gi|227823072|ref|YP_002827044.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342073|gb|ACP26291.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 215

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 17/162 (10%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L LFA    R +  + G      YI+ F   G P L+ + L +   F  P+LG      
Sbjct: 36  LLILFARIAKRPWLRRFGAG----YIALFQ--GTPLLMQLFLMF---FGLPMLG------ 80

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
              + P + +  + L+ Y +A++AEI R G+ A+PRGQ +A  +LGL + +  RLV+LPQ
Sbjct: 81  -FRIEP-WTAAALGLTFYASAYLAEIWRGGVEALPRGQWDAGASLGLHYLQELRLVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A     PP     + L+K+++L   +GF +L+     I N T
Sbjct: 139 AFAITRPPAVGFLVQLIKSTALTSIIGFEELLRTANAINNAT 180


>gi|50121082|ref|YP_050249.1| putative ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611608|emb|CAG75056.1| putative ABC transporter, permease [Pectobacterium atrosepticum
           SCRI1043]
          Length = 314

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 77/135 (57%), Gaps = 3/135 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL   + T  ++LPQA+RSI+
Sbjct: 161 QFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGGRRTVRIILPQALRSIL 220

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMI 381
           P   ++ ++L K +S+   +   +L      I N+T Q I +++   IW  +  ++  ++
Sbjct: 221 PTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWYLLITTVLSIV 280

Query: 382 ALFMNRLNAKIALKE 396
             ++ R  ++ A++E
Sbjct: 281 QYYVERYVSRGAVRE 295


>gi|330980427|gb|EGH78530.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 329

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 15/192 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKP 249
           FS +LG  L+L   RLS         AL   YI  F    +P L+++ + Y   +  D  
Sbjct: 97  FSIILGTALAL--ARLS---GSPLLAALAWGYIWFFR--SMPALLVLIILYNFAYLYDHI 149

Query: 250 VLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           VLG    Q  F   STV    +F    + LS   +A+ AEI+R GLI V  GQ EAA AL
Sbjct: 150 VLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAAL 209

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   
Sbjct: 210 GLPVSRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAV 269

Query: 364 IEIILIWMFIYL 375
           I ++++    YL
Sbjct: 270 IPLLIVATVWYL 281


>gi|325841308|ref|ZP_08167409.1| putative arginine ABC transporter, permease protein ArtQ
           [Turicibacter sp. HGF1]
 gi|325489989|gb|EGC92336.1| putative arginine ABC transporter, permease protein ArtQ
           [Turicibacter sp. HGF1]
          Length = 220

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 81/132 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           ++  + IAL   ++A++AEI+R+G+ AV +GQMEAA +LG++       ++ PQA+++I+
Sbjct: 89  DWTCIVIALVINSSAYVAEIIRAGIQAVDKGQMEAAKSLGMSDVHMMTRIIFPQAVKNIL 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L ++++ ++K +SLA      DL++    I + T + I  ++I   IY  ++  ++  
Sbjct: 149 PALGNEFIMMVKETSLASVFFINDLMTSYQMIKSATFKPIAPLMITAVIYFIVTFSLSKV 208

Query: 385 MNRLNAKIALKE 396
           +  +  ++++ +
Sbjct: 209 VKAMEGRLSVSD 220


>gi|293604534|ref|ZP_06686939.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292817115|gb|EFF76191.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 217

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 18/204 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            S VLG+V +L     +    + +G  + LL        G+P +VL+   + ++F  P +
Sbjct: 32  LSTVLGLVWALMRVSGNTFLSKFSGGVINLLR-------GIPIIVLL---FYIYFVMPDM 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G    +  + V    + L +A S Y A    E  R+G+ A+ RGQ+EAA+A+G++     
Sbjct: 82  G----VSFTAVQAAIIGLGVAYSAYQA----ENFRAGIQAIDRGQIEAAMAMGMSWSMTM 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA++ ++PP  +  + +LK+SS A  +  A+L   G  I   T +   +  +  
Sbjct: 134 RRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKLIAVSTFKNATVFSLVA 193

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
            +YL + + + L +  L  + A K
Sbjct: 194 LMYLVMCVPLILLVRHLEKRSAAK 217


>gi|261884771|ref|ZP_06008810.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. venerealis str. Azul-94]
          Length = 186

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 57/79 (72%), Gaps = 2/79 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+++E+VRSG+ ++P+GQ EAA + G ++ +    ++LPQ+++ I+PP T+Q
Sbjct: 100 LGIGAYHGAYMSEVVRSGINSIPKGQFEAATSQGFSYIEQMMYIILPQSIKIILPPATNQ 159

Query: 331 YLNLLKNSSLAVAVGFADL 349
            +NL+KNSS+ + +  ADL
Sbjct: 160 TVNLIKNSSVLLII--ADL 176


>gi|126731933|ref|ZP_01747736.1| ABC transporter, membrane spanning protein (amino acid) [Sagittula
           stellata E-37]
 gi|126707465|gb|EBA06528.1| ABC transporter, membrane spanning protein (amino acid) [Sagittula
           stellata E-37]
          Length = 461

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 57/82 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + +A++AE++R GL A+P+GQ E  ++LGL+  +  RL+++PQA+ ++IP + + 
Sbjct: 330 IGVVLFASAYMAEVIRGGLQAIPKGQYEGGMSLGLSFWQQMRLIIMPQALTTVIPGIVNT 389

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K+++L + +   DL+ +
Sbjct: 390 FIGLFKDTTLVLIISIFDLLGI 411


>gi|53728921|ref|ZP_00348273.1| COG0765: ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209155|ref|YP_001054380.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae L20]
 gi|126097947|gb|ABN74775.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
          Length = 219

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 25/187 (13%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            RL+R + E + +  PLL    FL +GLP    I +K+                      
Sbjct: 50  NRLARGYIELS-RNTPLLIQLFFLYYGLPK---IGIKWD--------------------- 84

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F    IAL    A+++AE +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    I
Sbjct: 85  GFTCGIIALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSI 144

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + +  L L+K +S+  AV  A+L+ V   II    +  E + +    YL + + I+L 
Sbjct: 145 PAIGANVLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLL 204

Query: 385 MNRLNAK 391
                 K
Sbjct: 205 ARHFENK 211


>gi|315446439|ref|YP_004079318.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|315264742|gb|ADU01484.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 487

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 20/208 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SFV+G+V++L    L+R         L   YIS  +I G P LV +   + + F  P 
Sbjct: 294 IISFVIGLVIAL-GVALARLSSNVVLSNLARFYIS--VIRGTPLLVQL---FIVFFALPE 347

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G         + P F +  IA S     + AEI+RS + ++P+GQ EAA  +GL +   
Sbjct: 348 FG-------VKIDP-FPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYVGT 399

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-----AIE 365
            R ++LPQA R  +PPL++  ++L+K++SLA  +   +L+     I   T +        
Sbjct: 400 LRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPTFEFFALYGTA 459

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  W+ I L LS   A F +RL   +A
Sbjct: 460 AVYYWV-ICLVLSFGQARFEHRLERYVA 486


>gi|328470443|gb|EGF41354.1| arginine transporter permease subunit ArtQ [Vibrio parahaemolyticus
           10329]
          Length = 229

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 1/134 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV RGQ EAA ALG++   A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQFHAFVRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLIT 205

Query: 382 ALFMNRLNAKIALK 395
              +  ++ K +++
Sbjct: 206 QRAVKVIDKKFSIQ 219


>gi|170741316|ref|YP_001769971.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168195590|gb|ACA17537.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 222

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 11/166 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G P LV++ L +   F  P LG         VSP   +   +L+ Y  A++ EI R 
Sbjct: 59  LIQGTPLLVIMFLTF---FGLPPLGL-------RVSP-LTAAGASLTIYVGAYLGEIWRG 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VPR Q EAA  L L+  +    V+LPQA+R   PP     + ++KN+SLA  VGF 
Sbjct: 108 AIQSVPRPQWEAAEGLALSRAQRMTKVILPQAVRIATPPTVGFMVQIVKNTSLASVVGFV 167

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L   G  I N   +   I  I   +Y ++   ++    RL  + A
Sbjct: 168 ELARAGQIINNSLFEPFLIYAIIAAVYFAMCFPLSRLSQRLERRGA 213


>gi|91780446|ref|YP_555653.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693106|gb|ABE36303.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 602

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 4/138 (2%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F +  + L+   AAF AE +R G+++V +GQ EAA ALGL   +  R ++LPQAMR
Sbjct: 166 ISP-FFAAVLGLTLNAAAFSAEAIRGGILSVDQGQREAAAALGLPGGRQVRRIVLPQAMR 224

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K +S+   +   DL      I ++  + I +++   +W  + L+  
Sbjct: 225 AILPTAFNDVIGLAKGTSVVYILAMPDLFYTVQIIYHRNLEVIPLLMVATVWYLVILTAL 284

Query: 379 IMIALFMNRLNAKIALKE 396
             I + + R  A+ A +E
Sbjct: 285 SAIQVHIERYYARGATRE 302


>gi|298290886|ref|YP_003692825.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927397|gb|ADH88206.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 240

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 72/134 (53%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F++  +AL     AF +E++ + + AVP+GQ EAA ALGL+  +  RLV  PQ  R  +
Sbjct: 103 QFVAGVVALGLVLGAFSSEVLLAAIRAVPKGQKEAAAALGLSGWRTFRLVTFPQLWRVAL 162

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L++ ++ LLK++SL   +  +DL+      +  T Q     L+   IYL  S   ++ 
Sbjct: 163 PGLSNNWMVLLKDTSLVSVIAISDLMRQTAIAVGVTKQPFFFYLVACLIYLVFSGASSVV 222

Query: 385 MNRLNAKIALKEKK 398
             +L  + A   K+
Sbjct: 223 FGKLEDRAARGFKR 236


>gi|312194702|ref|YP_004014763.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311226038|gb|ADP78893.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 329

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 10/175 (5%)

Query: 223 YISTFLIFGLPTLVLI-------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++ T+   G P L+ +       AL  ++    P   +F     + + P  ++  + L  
Sbjct: 128 WVYTWFFRGTPVLLQLIFWGTIGALYPRIAVGIPFGPEFASADSNKLIPLIVAGILGLGL 187

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA++AE+VR+G+ AV  GQ+EAA ALG+      R ++LPQAM+ IIPP  ++ +++L
Sbjct: 188 NEAAYMAEVVRAGISAVDEGQIEAAQALGMGRGLTMRRIVLPQAMKVIIPPTGNETISML 247

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNR 387
           K SSL   +   +L      I  +  Q I ++++    YL L+ ++++   F+ R
Sbjct: 248 KTSSLVSIIAVIELTYSVQLIYARNYQTIPLLIVAAIWYLVLTSVLSVGQYFLER 302


>gi|27367225|ref|NP_762752.1| arginine transporter permease subunit ArtQ [Vibrio vulnificus
           CMCP6]
 gi|27358793|gb|AAO07742.1| Arginine ABC transporter, permease protein ArtQ [Vibrio vulnificus
           CMCP6]
          Length = 229

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 1/130 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  IALS   A++ ++ +R  L AV +GQ EAA ALG++  +    ++LPQA+R
Sbjct: 87  VSP-FLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLVT 205

Query: 382 ALFMNRLNAK 391
              +  ++AK
Sbjct: 206 QRAVKIIDAK 215


>gi|115359034|ref|YP_776172.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115284322|gb|ABI89838.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 225

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y  T  + G+P  +++ + Y   F    L    F G   +SP F +  IAL+    A+ +
Sbjct: 52  YALTNFLRGIPEFLILLICY---FGLSHLLNAQFDGAFVISP-FSAGVIALAVVFGAYSS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R   IAVP GQ+EAA A G+T  +    V LPQA R  +P L + + NLLK++SL  
Sbjct: 108 EMFRGAFIAVPAGQIEAARAYGMTRLQTLWHVRLPQAWRICLPSLNNMWQNLLKDTSLVS 167

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 168 IVGLEDML 175


>gi|116750586|ref|YP_847273.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699650|gb|ABK18838.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 218

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 67/115 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  IA   + AA+ AEIVR G+ +V  GQ  A  + GL + +    ++LPQA+R+++P
Sbjct: 87  FVSTLIAFVAFEAAYFAEIVRGGVQSVSGGQAAAGYSCGLRYHQVQLYIILPQALRNMLP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            LT+Q + + +++SLA  +G  + +     +  +  ++IE+ L    +YL L  +
Sbjct: 147 ALTTQAVVIFQDTSLAYVIGLREFLRRVNLVDTREARSIELYLFAGTVYLVLCFL 201


>gi|124268065|ref|YP_001022069.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine [Methylibium petroleiphilum PM1]
 gi|124260840|gb|ABM95834.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Methylibium petroleiphilum PM1]
          Length = 229

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 21/207 (10%)

Query: 183 MDTNAKIFVFSFVLGIV----LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           + T  ++ + S  +G+V    L++     SR  H         ++  T++I G P LV +
Sbjct: 17  LATTLQLLLISLAIGLVAALPLAVLRVSASRWLHGP-------VWCFTYVIRGTPLLVQL 69

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPR 294
            L Y        L QF ++  S   P   S +    +A +  T A+  EI+   L A P 
Sbjct: 70  FLVYY------GLAQFEWVRASIAWPWLQSAWFCACLAFAVNTCAYTTEIIAGSLKATPH 123

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G++EAA ALGL+  +  R +LLP A+R  +P   ++ + +L  +SLA  V   DL     
Sbjct: 124 GEVEAARALGLSRAQVWRRILLPSALRRALPAYGNEAVLMLHGTSLASVVTLLDLTGAAR 183

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMI 381
            + ++     E  L    +YL L++ +
Sbjct: 184 EVNSRFYLPFEAFLTAAAVYLGLTLAL 210


>gi|320159033|ref|YP_004191411.1| arginine ABC transporterpermease ArtQ [Vibrio vulnificus MO6-24/O]
 gi|319934345|gb|ADV89208.1| arginine ABC transporter, permease protein ArtQ [Vibrio vulnificus
           MO6-24/O]
          Length = 229

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 1/130 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  IALS   A++ ++ +R  L AV +GQ EAA ALG++  +    ++LPQA+R
Sbjct: 87  VSP-FLSGVIALSLIFASYASQTIRGALKAVNKGQREAASALGMSKSRTFFRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT+Q+L LLK+++L   +G  DL+         T +A         IYL ++++ 
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLVT 205

Query: 382 ALFMNRLNAK 391
              +  ++AK
Sbjct: 206 QRAVKIIDAK 215


>gi|291618873|ref|YP_003521615.1| YecS [Pantoea ananatis LMG 20103]
 gi|291153903|gb|ADD78487.1| YecS [Pantoea ananatis LMG 20103]
          Length = 308

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 3/137 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+   AA+ AEI+R G + V  GQ+EAA ALGL+  + T  ++LPQA+R+II
Sbjct: 146 QFPAAVIGLTLVQAAYSAEIIRGGFLGVDHGQVEAASALGLSASRRTFRIILPQALRAII 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMI 381
           P   ++ ++L K +++   +   +L      I N+  + I ++++   W  I  ++  +I
Sbjct: 206 PTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 265

Query: 382 ALFMNRLNAKIALKEKK 398
              + R  A+   +E K
Sbjct: 266 QHSVERWLARSVSREPK 282


>gi|317049448|ref|YP_004117096.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951065|gb|ADU70540.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 236

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 58/104 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FMS  ++LS +  A   E  RSG  AVP+  +EAA +LG T     R V +P A R  +P
Sbjct: 103 FMSATVSLSLFGGALCIEAFRSGFDAVPKATLEAARSLGYTRWGLFRHVQVPIAARICLP 162

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           PLT+   NL K +S A  +   +L+   G I N T + +E++L+
Sbjct: 163 PLTNVLTNLFKTTSQASVITVPELMYAAGQIYNDTFRTLEVMLL 206


>gi|184156274|ref|YP_001844614.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|227514071|ref|ZP_03944120.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus fermentum ATCC
           14931]
 gi|183227618|dbj|BAG28134.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|227087552|gb|EEI22864.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus fermentum ATCC
           14931]
          Length = 229

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 96/178 (53%), Gaps = 14/178 (7%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSR-HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           I + SFV+G+V+++     R+S+ H   K   A+     S ++     T +L+ L + + 
Sbjct: 23  IAIISFVIGLVIAVITALIRISKPHGKSKAVWAVVRAVFSFYVWLFRSTPLLVQL-FIVF 81

Query: 246 FDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           F  P +G QFN          + +  I  S  T A+ +E +R  L+++P  Q +AA ++G
Sbjct: 82  FGLPNVGIQFN---------AWTAGIITFSLNTGAYASETIRGALLSIPDSQWDAAYSIG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +T+R+    ++ PQA+R  +PPL++ ++ L+K++SLA ++   ++  V   I +   Q
Sbjct: 133 MTYRQVLFRIVFPQALRVALPPLSNSFIGLVKDTSLASSITIVEMFMVSQQIASNNYQ 190


>gi|50121893|ref|YP_051060.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49612419|emb|CAG75869.1| ABC transporter permease protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 221

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 67/112 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL+ Y+AA+  EI R+GL ++  GQ E A ALG+ H    R V+LPQ +R+++P
Sbjct: 91  FAAAVLALTLYSAAYCTEIFRAGLQSIDHGQWEGAKALGMRHTVILRRVVLPQVLRNMLP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            LT++ + L K +SLA  +   +L+  G  + +   + +EI+ +   +Y  L
Sbjct: 151 ALTNRMIELAKVTSLASILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVL 202


>gi|326381366|ref|ZP_08203060.1| ABC transporter substrate-binding/permease protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199613|gb|EGD56793.1| ABC transporter substrate-binding/permease protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 581

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 15/170 (8%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +  GLP +V+I L   L F  P++   N  GG+     F    +AL+   AA+I EI 
Sbjct: 415 TDVFRGLPAVVVI-LMVGLGF-GPIVK--NLTGGN----PFWLGSVALALLAAAYIGEIF 466

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ +V  GQMEAA ALG +H  + RLV++PQ +R ++P L +Q++ L+K+SSL   +G
Sbjct: 467 RFGIQSVESGQMEAARALGFSHHSSMRLVVIPQGVRRVLPALVNQFIVLIKDSSLIYFLG 526

Query: 346 FA----DLVSVGGTIINQTGQAIEII---LIWMFIYLSLSIMIALFMNRL 388
                 DL +VG      +G    ++   L+++ + + L+ ++    NRL
Sbjct: 527 LTLLQRDLFAVGKDFNANSGNLTPLVAAGLLYLVMTVPLTHLVNYIDNRL 576



 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            G  NT  +A +  I  TI G L+    +S  + + W  RVY +VFR +P +VVI  +
Sbjct: 373 TGLPNTLKIALTSGILGTIGGMLLAMAGMSRTRWLRWPARVYTDVFRGLPAVVVILMV 430


>gi|319948858|ref|ZP_08022971.1| putative ABC transporter permease protein [Dietzia cinnamea P4]
 gi|319437460|gb|EFV92467.1| putative ABC transporter permease protein [Dietzia cinnamea P4]
          Length = 214

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 3/133 (2%)

Query: 264 PEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           P+F +L I +     + A ++AE+ R+G+ AVPRGQ EAA AL L   +  R V+LPQA+
Sbjct: 81  PQFTALQIGIGVIGVHYATYMAEVYRAGIDAVPRGQWEAAQALSLPAGRTWRAVVLPQAI 140

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P L +  ++L K++    A+   ++V+       +  Q +E I +   I+L  S  
Sbjct: 141 RNTVPALGNYAISLFKDTPFLFAITVVEMVTAAQQYGARNFQYLEPITLAGVIFLLASYP 200

Query: 381 IALFMNRLNAKIA 393
            ++ + RL   +A
Sbjct: 201 TSILIRRLEKSLA 213


>gi|291549386|emb|CBL25648.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus torques L2-14]
          Length = 236

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 76/122 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+RSG+ +V  GQMEA  A+GL+   +   +++PQA+++I+P L +++++L+K
Sbjct: 114 SGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMMKIVIPQAVKNILPTLGNEFISLIK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG ADL      I + + + +   L+   IY++L ++I L +  L   +   +
Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIALVLVITLLVKLLERSLKKSD 233

Query: 397 KK 398
           ++
Sbjct: 234 RR 235



 Score = 37.4 bits (85), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 6/110 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL-----SANKLV 125
           ++D+ I  + + + Y   ++ G  NT  +A  G+I   +IGTL+   R+     +  +++
Sbjct: 7   KVDKFIDIFLNQNGY-VKVVQGLHNTLLIAICGLIIGIVIGTLIATVRVIPKYKTLPRVL 65

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
             IC  YV +FR  P +V +   Y  +L +  +    + +   +F  N G
Sbjct: 66  NHICSFYVALFRGTPMVVQLLIFYYVLLPIFGVKITGVQVSMVVFGLNSG 115


>gi|227529781|ref|ZP_03959830.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350265|gb|EEJ40556.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 486

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 28/206 (13%)

Query: 160 DHSIVLPFGMFLNN-----RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           DH+I+   G+   N     RGL    +T++      +F+ + G++L +    ++  F   
Sbjct: 271 DHTIL---GLLKTNHEALLRGL---WMTIELTVVGIIFAMIFGVILGVLGV-VNNKF--A 321

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
            G +  L+YI      G+P +VL    Y        +G  N IG     P F++  + L+
Sbjct: 322 NGISSTLIYI----FRGIPMIVLAFFIY--------MGVPNVIGHKV--PLFLAGILTLT 367

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+I  IV+ G  +V +GQ EAA +LGL + KA   V+ PQ  + ++P L +Q++  
Sbjct: 368 LDEGAYIGAIVKGGFESVSQGQWEAARSLGLPYSKALIKVIAPQGFKLMVPSLVNQFIIT 427

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQT 360
           LK++S+  A+G  +L   G  II+Q 
Sbjct: 428 LKDTSILSAIGVMELTQTGTVIISQN 453



 Score = 36.2 bits (82), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L   G+I A I G ++G   +  NK    I    + +FR IP +V+ FF
Sbjct: 284 ALLRGLWMTIELTVVGIIFAMIFGVILGVLGVVNNKFANGISSTLIYIFRGIPMIVLAFF 343

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +Y  V +V+    H + L     L        TLT+D  A I
Sbjct: 344 IYMGVPNVI---GHKVPLFLAGIL--------TLTLDEGAYI 374


>gi|227327917|ref|ZP_03831941.1| putative amino-acid transport system permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 221

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 24/203 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHF 246
           F+F   LGI+++L      R +  K     PL ++  F ++   G P LV + L +    
Sbjct: 31  FIFGLALGIIIALV-----RLYGPK-----PLKWVGDFYVWVIRGTPLLVQLFLIF---- 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  +           F +  I  +    A+ +EIVR  +++VP+GQ  AA +LG+ 
Sbjct: 77  -------YGLPSAGITLDAFPAALIGFTISVGAYSSEIVRGAILSVPKGQWNAAYSLGMN 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+A R V+ PQ++   +PPL++ +++L+K++SLA  +   ++      I++ T + + +
Sbjct: 130 GRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLSAQRIVSVTYEPLIL 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            +    IYL  S +++    +L 
Sbjct: 190 YVEAALIYLMFSTVLSQLQVKLE 212


>gi|226310677|ref|YP_002770571.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093625|dbj|BAH42067.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 219

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 25/173 (14%)

Query: 193 SFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           S  LG +++L A   ++      H +    +  PLL    F+ FGLP L           
Sbjct: 31  SIPLGFLITLLAKSSNKALAWLAHTYVYVMRGTPLLLQLLFICFGLPLL----------- 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV+G +       V   F++  +      AA+ AEI R GL+++ +GQ EAA  LG +
Sbjct: 80  --PVVGDY------LVMDRFVAACVGFVLNYAAYFAEIFRGGLLSIDKGQYEAAQVLGFS 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             + T  +++PQ  R  +P + ++ + L+K+++L  AV   +L+    T +N+
Sbjct: 132 KWQTTNKIIMPQMFRVALPAVANESITLVKDTALLYAVAVPELLHFAQTAVNR 184


>gi|148652491|ref|YP_001279584.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148571575|gb|ABQ93634.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 224

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 65/106 (61%), Gaps = 4/106 (3%)

Query: 245 HFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +F  P++  +N + GS  T    F S  +A   + AA+ +E+VR+G+ ++   Q+ AA A
Sbjct: 75  YFAVPMI--YNGLTGSYITFDTAFTSCVVAFMVFEAAYFSEVVRAGIQSIGSAQVNAAKA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           LG+T+ +  RL++LPQA R + P +  Q + L ++++L  A+G +D
Sbjct: 133 LGMTYAQTMRLIILPQAFRKMTPLILQQCIILFQDTTLVFAIGLSD 178


>gi|322832575|ref|YP_004212602.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167776|gb|ADW73475.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 304

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 70/119 (58%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    + LS   +A+ AEI+R G++ V  GQ EAA ALGL   + T  ++LPQA+RSI+
Sbjct: 153 QFSVAVLGLSLVQSAYTAEIIRGGILGVEHGQHEAAAALGLPAYRRTFRIILPQALRSIL 212

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           P   ++ ++L K +S+   +   +L      I N+T Q I ++++    YL ++ ++++
Sbjct: 213 PTGFNEVISLAKGTSIVYVLSMPELFYTVQVIYNRTQQVIPLLMVATIWYLLITTVLSV 271


>gi|225019523|ref|ZP_03708715.1| hypothetical protein CLOSTMETH_03476 [Clostridium methylpentosum
           DSM 5476]
 gi|224947744|gb|EEG28953.1| hypothetical protein CLOSTMETH_03476 [Clostridium methylpentosum
           DSM 5476]
          Length = 223

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 26/147 (17%)

Query: 220 PLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           PLL    FL +GLP + V+I+ +        V+G  +F+GGS                  
Sbjct: 64  PLLIQLFFLFYGLPKIGVMISAQ-----ACAVIG-LSFLGGS------------------ 99

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            ++AE  RSG  AV + Q+EA +++GLT R+ TR ++LPQA    IP LT+  + LLK +
Sbjct: 100 -YMAESFRSGFEAVGKTQLEAGMSIGLTRRQLTRYIILPQAFSVSIPSLTANAIFLLKET 158

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIE 365
           S+  A+  ADL+ V   +I    +  E
Sbjct: 159 SIFSAIALADLMFVAKDLIGMYYKTFE 185


>gi|167620109|ref|ZP_02388740.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
          Length = 236

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V    LG+ L+L    L        G  +A+P+L +  +  F LP L        LH D 
Sbjct: 57  VLGVALGVALALATGALRGALIVVIGFFRAIPVLMLIFWTYFLLPVL--------LHADV 108

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L                ++  ALS    A++A  V +G+ A   GQ +A ++LGLT R
Sbjct: 109 PGLA---------------AVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRR 153

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +  R VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 QTVRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204


>gi|291450578|ref|ZP_06589968.1| amino acid ABC transporter [Streptomyces albus J1074]
 gi|291353527|gb|EFE80429.1| amino acid ABC transporter [Streptomyces albus J1074]
          Length = 139

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 75/123 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + AA+ AEIVR+G+++V  GQ++AA +LG+   +  R ++LPQAMRSI+P   ++
Sbjct: 12  LGLALHQAAYAAEIVRAGVLSVDAGQLQAAASLGIPRLRQIRRIVLPQAMRSILPNAANE 71

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L K +S+   +   +L      I  + G+ + ++++    Y+ L+ ++++  + +  
Sbjct: 72  IISLFKGTSIVSVMAIGELFYQVQVIYGRNGRVVPLLMVATLWYVLLTTVLSVVQHHVEK 131

Query: 391 KIA 393
           + A
Sbjct: 132 RFA 134


>gi|240950021|ref|ZP_04754329.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus minor NM305]
 gi|240295499|gb|EER46242.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus minor NM305]
          Length = 238

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 26/211 (12%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+V++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMVIAVGVALIRVTPVNGVLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G F       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 96  LPAIGVF-------IDP-IPAAIIGFSLNIGAYASETVRAAISSVPKGQWEAGFTIGMTY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI- 366
            +  R ++ PQA+R  +PPL++ ++ L K++SLA  V   ++  V   + N +   + + 
Sbjct: 148 MQTFRRIIAPQAVRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207

Query: 367 ----ILIWMFIYLSLSIMIAL--FMNRLNAK 391
               ++ W F ++   I   L    NR  AK
Sbjct: 208 IEAGLIYWCFCWVLFYIQAKLETRFNRFVAK 238


>gi|239833357|ref|ZP_04681685.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821420|gb|EEQ92989.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 215

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 18/210 (8%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +I   + +LG+V++  L A RLSR       + L   Y+S F   G P LV +   + L+
Sbjct: 22  QISALALILGLVVAAILVAGRLSRS---PILRGLAAAYVSVFR--GTPCLVQL---FILY 73

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P +G         + P F +  I L     A+++E +R  + +V RGQ EAA ++G 
Sbjct: 74  FGGPQVG-------INLEP-FAAGVIGLGLNIGAYMSESIRGAIQSVDRGQTEAARSVGF 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RLV+LPQA R +I PL    + LLK S+L   +   +L       I  T +  E
Sbjct: 126 GRGQTMRLVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTYTAQRFIGSTYKPFE 185

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I  +   +Y+ +  ++A  ++ L+ + A +
Sbjct: 186 IFGVAAILYMIIIYVVARGVDFLDKRFAAQ 215


>gi|197104924|ref|YP_002130301.1| ABC-type amino acid transport system, permease component
           [Phenylobacterium zucineum HLK1]
 gi|196478344|gb|ACG77872.1| ABC-type amino acid transport system, permease component
           [Phenylobacterium zucineum HLK1]
          Length = 358

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 3/112 (2%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++R GL A+P GQ EAA ALGL + +  R V+LPQA+  +IP LT+  + ++KN+SL +
Sbjct: 242 EVIRGGLQALPPGQAEAARALGLGYWRTQRFVVLPQALALVIPSLTNTIIVMIKNTSLVL 301

Query: 343 AVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            VG  DL+S G   +     +  A+E  +    +Y +L      F   L  +
Sbjct: 302 VVGLFDLISSGRAALADPEWSSPAMETYIFIASVYFALCFGFGRFARALERR 353


>gi|71064882|ref|YP_263609.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK
           [Psychrobacter arcticus 273-4]
 gi|71037867|gb|AAZ18175.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK
           [Psychrobacter arcticus 273-4]
          Length = 223

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 30/185 (16%)

Query: 177 SFPTLT--MDTNAKIFVFSFV----LGIVLSLF------ATRLSRHFHEKTGKALPLLYI 224
           ++P L   M T  K+   + V    LG VL+L       A  +    +    +++PLL +
Sbjct: 10  AYPGLMGGMLTTLKVLFLAIVGGISLGTVLALMRLSGIKALEIPAKLYVNYFRSVPLLLV 69

Query: 225 STFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             +  F +P +   +A KY L  D                  F S  +A   + AA+ +E
Sbjct: 70  LLWFYFAVPMIYFWVAGKY-LQLDT----------------AFTSCVVAFMMFEAAYFSE 112

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR+G+ ++  GQ+ AA ALG+T+ +  RL++LPQA R ++P +  Q + L ++++L  A
Sbjct: 113 VVRAGIQSIGSGQVNAAKALGMTYGQTMRLIILPQAFRKMLPLILQQCIILFQDTTLVFA 172

Query: 344 VGFAD 348
           +G  D
Sbjct: 173 IGLTD 177


>gi|150018982|ref|YP_001311236.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149905447|gb|ABR36280.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 210

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 21/162 (12%)

Query: 195 VLGIVLSLF---ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           ++ IVLS+F      +SR+F +     +  +YI TF     P L+ I     + F  P+ 
Sbjct: 25  IISIVLSMFFGIILAISRNFSKGIMGRIATIYIETFR--NTPNLLWI---LSIRFLVPIK 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             ++ I             ++ + +T+A +AEI R G+ +V RGQ EAA + G T  +  
Sbjct: 80  PMYSGI-------------LSFTLFTSAVMAEIFRGGMNSVSRGQYEAAYSQGFTKFQTL 126

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R ++LPQ+ R  IP + SQ + ++K++S   AVG  +    G
Sbjct: 127 RYIILPQSFRRCIPTVLSQSITVIKDTSFLWAVGIEEFTGKG 168


>gi|293375083|ref|ZP_06621373.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292646277|gb|EFF64297.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 220

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 81/132 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           ++  + IAL   ++A++AEI+R+G+ AV +GQMEAA +LG++       ++ PQA+++I+
Sbjct: 89  DWTCIVIALVINSSAYVAEIIRAGIQAVDKGQMEAAKSLGMSDVHMMTRIIFPQAVKNIL 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L ++++ ++K +SLA      DL++    I + T + I  ++I   IY  ++  ++  
Sbjct: 149 PALGNEFIMMVKETSLASVFFINDLMTSYQMIKSATFKPIAPLMITAVIYFIVTFSLSKV 208

Query: 385 MNRLNAKIALKE 396
           +  +  ++++ +
Sbjct: 209 VKAMEGRLSVSD 220


>gi|212640130|ref|YP_002316650.1| amino acid ABC transporter permease [Anoxybacillus flavithermus
           WK1]
 gi|212561610|gb|ACJ34665.1| ABC-type amino acid transport system, permease component
           [Anoxybacillus flavithermus WK1]
          Length = 236

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 105/201 (52%), Gaps = 18/201 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F++G+V++L  T L+R    K  + +   Y+S   I G P LV +   + + +  P +G
Sbjct: 45  TFIIGLVIALL-TALARLSSIKALQWIARAYVSA--IRGTPLLVQL---FIIFYGLPTIG 98

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    +     +  I  S    A+ +EI+R+ ++++P+GQ EAA +LG+   +  R
Sbjct: 99  --------IIIDPLPAAIIGFSLNVGAYASEIIRAAILSIPKGQWEAAYSLGMDDVQTLR 150

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EIIL 368
            ++LPQA R  +PPL++ +++L+K++SLA  +  +++      I     + +    E  L
Sbjct: 151 RIILPQAARVSVPPLSNTFISLVKDTSLASLILVSEMFRKAQEIAATNYEFLLLYTEAAL 210

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
           I+  I   LSI+     +RLN
Sbjct: 211 IYWIICFFLSIIQGNIESRLN 231


>gi|171059883|ref|YP_001792232.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170777328|gb|ACB35467.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 216

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 66/119 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ Y +A++ EI R  ++A+P+GQ EAA +L L+  +  R V+ PQA+R  +PP    
Sbjct: 91  LALTFYASAYLTEIWRGCVMAIPKGQWEAADSLALSFGEKMRHVIGPQALRIAVPPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + ++K ++LA  +GF +L   G  I N T +   +      +Y  L   ++ +  +L 
Sbjct: 151 LVQVIKGTALASVIGFIELTKAGTMITNATFRPFTVYACVAVMYFVLCWPVSAYARKLE 209


>gi|90577482|ref|ZP_01233293.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90440568|gb|EAS65748.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 311

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 65/112 (58%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G S +     S  + +    AA+IAE++R+GL ++  GQ EAA +LGL+     R V+ P
Sbjct: 171 GSSQLWENLFSGILCVGLIAAAYIAEVIRAGLDSIDNGQWEAADSLGLSKFDRFRFVIFP 230

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           QA+  I+P L  Q+++++K+SS+   +   ++  VG  + N +G   EI L+
Sbjct: 231 QAIAGIVPALAGQFISIVKDSSIISLISIQEITFVGSEMANSSGLIFEIWLL 282


>gi|15892094|ref|NP_359808.1| amino acid ABC transporter permease protein [Rickettsia conorii
           str. Malish 7]
 gi|34580875|ref|ZP_00142355.1| amino acid ABC transporter permease protein [Rickettsia sibirica
           246]
 gi|229586369|ref|YP_002844870.1| Amino acid ABC transporter permease protein [Rickettsia africae
           ESF-5]
 gi|238650695|ref|YP_002916548.1| amino acid ABC transporter permease protein [Rickettsia peacockii
           str. Rustic]
 gi|81774423|sp|Q92J96|GLNP_RICCN RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|15619217|gb|AAL02709.1| amino acid ABC transporter permease protein [Rickettsia conorii
           str. Malish 7]
 gi|28262260|gb|EAA25764.1| amino acid ABC transporter permease protein [Rickettsia sibirica
           246]
 gi|228021419|gb|ACP53127.1| Amino acid ABC transporter permease protein [Rickettsia africae
           ESF-5]
 gi|238624793|gb|ACR47499.1| amino acid ABC transporter permease protein [Rickettsia peacockii
           str. Rustic]
          Length = 218

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F  V+G++L++       A RL  +F+    +  PLL   + + F  P +  I +K+ +
Sbjct: 31  IFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPYI--IGIKFSV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                FM+  IA S  + A+++E++R+G+ AV +GQ EAA AL 
Sbjct: 89  ---------------------FMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +     T+ ++LPQA+++I P L ++ +NL+K S++   +G  DL+
Sbjct: 128 IPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173


>gi|260597203|ref|YP_003209774.1| glutamine ABC transporter permease [Cronobacter turicensis z3032]
 gi|260216380|emb|CBA29430.1| Glutamine transport system permease protein glnP [Cronobacter
           turicensis z3032]
          Length = 219

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 16/197 (8%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIV+ L A  L+R +       + L++I   +I G P +V +   Y   F  P+   F  
Sbjct: 33  GIVIGLLAG-LARSYGGWIANHIALVFIE--IIRGTPIVVQVMYIY---FALPM--AFPD 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           I   T    F +  I +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V++
Sbjct: 85  IRIDT----FTAAVITIMINSGAYIAEITRGSVLSIHKGFSEAGLALGLSRRETIRHVIM 140

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----LIWMF 372
           P A+R ++P L +Q +  +K++SL + +G A+L   G  II    +A+EI     +I++ 
Sbjct: 141 PLALRRMLPALGNQLIISIKDTSLFIVIGAAELTRSGQEIIAGNFRALEIWTAVGVIYLI 200

Query: 373 IYLSLSIMIALFMNRLN 389
           I   L+I++ +   R+ 
Sbjct: 201 ITQVLNIVLRILERRMK 217


>gi|330880664|gb|EGH14813.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 201

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 63/109 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+ +  + ++EIVR  L A+P GQ+EA  A+GL   ++ R VLLPQAMR I+P
Sbjct: 91  FQAGAIGLTLFCGSHVSEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
              +    ++K S+L   +G A+L+     +I +T   +E  L   F++
Sbjct: 151 TWVNSSTEIVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLF 199


>gi|239635972|ref|ZP_04676989.1| L-cystine transport system permease protein TcyL [Staphylococcus
           warneri L37603]
 gi|239598437|gb|EEQ80917.1| L-cystine transport system permease protein TcyL [Staphylococcus
           warneri L37603]
          Length = 229

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 79/140 (56%), Gaps = 4/140 (2%)

Query: 254 FNFIGGSTVSPEFMS----LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           FN I  ++++P+ +       I  S +  A+++E ++ GL++V   Q+EAA  +GL+   
Sbjct: 81  FNAICHTSMNPDMVPPLLIAAITFSLHATAYLSESIKGGLLSVDTKQIEAAQTVGLSKWN 140

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++ PQA    +P + +Q++ LLK +SLA AV   +++++   + N+  Q + +  +
Sbjct: 141 VYRRIVFPQAFGYALPNIENQFIMLLKGTSLAFAVQVTEIMAISTEMANEGYQFVPVYTV 200

Query: 370 WMFIYLSLSIMIALFMNRLN 389
               Y +L+I+I L  ++L 
Sbjct: 201 AAIFYWALAIIIELIFHKLE 220


>gi|227820381|ref|YP_002824352.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339380|gb|ACP23599.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 219

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 64/114 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL  ++AAF+ EI R  + A+ +GQ EA+ +LG+   +  R V+LPQAMR  
Sbjct: 84  PAWLAAGLALILWSAAFLGEIWRGCVEAIAKGQWEASASLGMGRLQQMRYVILPQAMRIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           + P     + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L
Sbjct: 144 VAPTVGFSVQVIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL 197


>gi|146311739|ref|YP_001176813.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145318615|gb|ABP60762.1| amino acid ABC transporter membrane protein, PAAT family
           [Enterobacter sp. 638]
          Length = 306

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 76/134 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL ++ +++  
Sbjct: 206 PAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITTVLSAI 265

Query: 385 MNRLNAKIALKEKK 398
            + +   +A  E++
Sbjct: 266 QHIVERGLARSERR 279


>gi|300853856|ref|YP_003778840.1| putative amino acid ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300433971|gb|ADK13738.1| predicted amino acid ABC transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 198

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 30/204 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           +T++      +   +LG+ L+L         +L   F+    +  PLL    F  +GLP 
Sbjct: 1   MTIELTVITLILGTMLGVFLALLKLSKNIVLKLVSSFYTWIFRGTPLLLQLFFFYYGLP- 59

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              I ++    F   +LG                  + L+C   A++AEI+R G+ ++ +
Sbjct: 60  --FIGIELT-PFTAAILG------------------LGLNC--GAYMAEIIRGGIQSINK 96

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALG ++ +  R ++LPQ  + IIPP+ ++++++LK++SL   +   +L+    
Sbjct: 97  GQFEAAKALGFSYVETMRKIILPQTWKIIIPPVGNEFISILKDTSLVSTIAMVELMRSAQ 156

Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378
            I   +   I + L    +YL ++
Sbjct: 157 QIYASSFDPISVFLTAAILYLIMT 180


>gi|259906953|ref|YP_002647309.1| transport system permease protein [Erwinia pyrifoliae Ep1/96]
 gi|224962575|emb|CAX54030.1| transport system permease protein [Erwinia pyrifoliae Ep1/96]
 gi|283476747|emb|CAY72582.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 366

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 52/76 (68%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ E A +L L + K   LV+LPQA++ +IP L +  + L 
Sbjct: 240 FQSAYVAEVVRGGLQALPKGQYEGAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALF 299

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 300 KDTSLVIIIGLFDLFS 315


>gi|220920917|ref|YP_002496218.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219945523|gb|ACL55915.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 236

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 23/160 (14%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFDKP 249
           +FV+G +++L  T         +G A+ L + +T L++   GLP ++ +   +  +F  P
Sbjct: 39  AFVIGTLIALART---------SGHAV-LQWPATVLVYVVRGLPPVMAV---FWAYFALP 85

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L     IG     P F +L  AL  Y +A+++EI+R+G+ A+P+GQ EA+ ALG+ + +
Sbjct: 86  AL-----IGRPI--PGFWTLLAALILYESAYLSEILRAGIRALPKGQFEASRALGMGYLQ 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            TR ++LPQ   +++P + SQ+++ +K +SL   +   +L
Sbjct: 139 TTRDIVLPQVYYTMLPSMVSQFVSTIKETSLGYIIAVQEL 178



 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  LA S +  A +IGTL+   R S + ++ W   V V V R +PP++ +F+ Y
Sbjct: 22  LGGLAMTLILAVSAIAAAFVIGTLIALARTSGHAVLQWPATVLVYVVRGLPPVMAVFWAY 81

Query: 150 KSVLSVL--PIPD 160
            ++ +++  PIP 
Sbjct: 82  FALPALIGRPIPG 94


>gi|153011666|ref|YP_001372880.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563554|gb|ABS17051.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 595

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + ++ L+   +AF AEIVR G+++V +GQ EAA ALGL   +    ++LPQAMRSI+P
Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDQGQHEAAAALGLPRNRQALRIVLPQAMRSILP 225

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K +S+   +   +L      I  +  + I +++   +W  + +++  +  
Sbjct: 226 TGFNEIIGLAKGTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLVIMTVLSVAQ 285

Query: 383 LFMNRLNAKIALK 395
            ++ R  AK A++
Sbjct: 286 YYIERYFAKGAVR 298


>gi|326384738|ref|ZP_08206415.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326196546|gb|EGD53743.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 485

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 14/171 (8%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+ T   +   SF +G+V++L    L+R    +    +   YIS  +I G P LV +   
Sbjct: 283 TITTTIPLAAVSFAIGLVIALLVA-LARMADNRVLAWIARAYIS--IIRGTPLLVQL--- 336

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + + +  P LG F         P   +  IA S     + AEI+RS +++VP+GQ EAA 
Sbjct: 337 FIIFYALPELG-FKV-------PPLPAAAIAFSLNVGGYAAEIIRSAIMSVPKGQSEAAQ 388

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +G+++    R ++LPQA R  +P L++  ++L+K++SLA  +   +L+ V
Sbjct: 389 TIGMSYATTMRRIILPQAARIAVPGLSNTLISLVKDTSLASTILVTELLRV 439



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV----LSVLPIPDHSIV 164
           +I  LV   R++ N+++AWI R Y+ + R  P LV +F ++ ++      V P+P  +I 
Sbjct: 300 VIALLVALARMADNRVLAWIARAYISIIRGTPLLVQLFIIFYALPELGFKVPPLPAAAIA 359


>gi|322373066|ref|ZP_08047602.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321278108|gb|EFX55177.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 213

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 57/91 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G++A+P+GQ EAA  L L+  +  R V+LPQ ++ ++P + ++
Sbjct: 89  IAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSPFQTIRYVILPQVVKIVLPSIFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179


>gi|254488499|ref|ZP_05101704.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           GAI101]
 gi|214045368|gb|EEB86006.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           GAI101]
          Length = 431

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE++R GL A+PRGQ E A +LGL + ++ RL++LPQA++  IP + + 
Sbjct: 301 IMITMFASAYIAEVIRGGLAALPRGQYEGAESLGLDYAQSMRLIILPQALKISIPGIVNV 360

Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + L K+++L   +   DLV  + G I+  T
Sbjct: 361 AVGLFKDTTLVSIISMFDLVGMIRGPILAST 391


>gi|119387392|ref|YP_918426.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119377967|gb|ABL72730.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 214

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 1/136 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           IGG  V P  ++  +A++ Y+ A++ EI +  + AVP+ Q EAA  L LT  +    V+L
Sbjct: 77  IGGFEV-PALVAAGLAMTLYSGAYLGEIWKGCIQAVPKTQWEAAECLALTPAQRFVYVVL 135

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R  IPP     + ++KN+S AV + F DL      I N T     +  +   IY +
Sbjct: 136 PQALRIAIPPTVGFMVQIVKNTSYAVVINFFDLTYSAKVINNSTFMPFTVFTLAAAIYFA 195

Query: 377 LSIMIALFMNRLNAKI 392
           +   +++   R   K+
Sbjct: 196 ICFPMSVLAQRYERKL 211


>gi|310814815|ref|YP_003962779.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753550|gb|ADO41479.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 226

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 3/131 (2%)

Query: 254 FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           F F G S+V    P  ++   AL     A+ AEI+R+G+ A+P+GQ+EAA ALGL+  + 
Sbjct: 75  FLFFGMSSVGVRMPIMVAAIFALVVNVGAYTAEIIRAGMDAIPKGQIEAAEALGLSQFQI 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++L  A+  + P LTSQ++ ++  +S+   +   +L  V   I + T ++ E  ++ 
Sbjct: 135 YRDIILMPAIEKVYPALTSQFVLMMLTTSICSQISAEELTGVANNIQSNTFRSFETYIVI 194

Query: 371 MFIYLSLSIMI 381
              Y+ +++M+
Sbjct: 195 GLFYIGITLMM 205


>gi|307308378|ref|ZP_07588083.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306901179|gb|EFN31786.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 222

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 18/197 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A   V    LGIV  L   R+SR    +T   + + YI   LI   P LV +   
Sbjct: 24  TLRMSAISMVAGLALGIVFML--MRISRLGPVRT---IAIGYIE--LIRNTPFLVQV--- 73

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + ++F  P LG    +GG     E   L ++L+C  AA+ AEIVR G+ ++  GQ+EA  
Sbjct: 74  FFIYFGMPTLG--IKLGGE----EAAILAMSLNC--AAYAAEIVRGGVQSIRPGQIEAGR 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL      R ++   A+R++ P L SQ++ ++ NSSL  +V   +L  +  T+  QT 
Sbjct: 126 ALGLHTIDIYRFIVFRPAIRAVYPALCSQFILMMLNSSLVASVSAEELTYMAQTLDAQTF 185

Query: 362 QAIEIILIWMFIYLSLS 378
           ++ EI  +   IYL LS
Sbjct: 186 RSFEIYFVLGAIYLLLS 202


>gi|186895949|ref|YP_001873061.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis
           PB1/+]
 gi|186698975|gb|ACC89604.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 218

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 70/118 (59%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++  G  EA +ALGL+ R     V+ P A+R ++PPL +Q++  +K
Sbjct: 100 SGAYIAEITRGAVLSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPPLGNQWIVSIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++SL + +G A+L      II    +A+EI      IYL +++ ++  + RL  K+ +
Sbjct: 160 DTSLFIVIGVAELTRQSQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 217


>gi|158423074|ref|YP_001524366.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158329963|dbj|BAF87448.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 213

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 70/132 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + ++ +  + + +A++ EI R  + AVPRGQ EA+ AL L +    R V+LPQA+R  +P
Sbjct: 82  WAAVSVGFTLHASAYLGEIWRGSIEAVPRGQTEASHALSLGYVSRMRDVVLPQAIRISLP 141

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  VGF +L   G  + NQ  Q + +  I   +Y  +   ++LF 
Sbjct: 142 ATIGFLVQLIKGTSLASIVGFTELARAGNIVSNQIFQPLLVFGIVGILYFLMCWPLSLFG 201

Query: 386 NRLNAKIALKEK 397
             L  + A   +
Sbjct: 202 AHLERRFATPAR 213


>gi|83721079|ref|YP_442969.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|83654904|gb|ABC38967.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 247

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V    LG+ L+L    L        G  +A+P+L +  +  F LP L        LH D 
Sbjct: 42  VLGVALGVALALATGALRGALIVVIGFFRAIPVLMLIFWTYFLLPVL--------LHADV 93

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L                ++  ALS    A++A  V +G+ A   GQ +A ++LGLT R
Sbjct: 94  PGLA---------------AVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRR 138

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +  R VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 139 QTVRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|228989959|ref|ZP_04149935.1| Amino acid ABC transporter [Bacillus pseudomycoides DSM 12442]
 gi|228769783|gb|EEM18370.1| Amino acid ABC transporter [Bacillus pseudomycoides DSM 12442]
          Length = 226

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 91/157 (57%), Gaps = 14/157 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + +F +G++L+   T L+R    +  + +  +Y+S  +I G P LV +   + +
Sbjct: 27  TTIPLTLITFAIGLILATL-TALARISGSRLLQWIARIYVS--IIRGTPLLVQL---FII 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L          + P + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +G
Sbjct: 81  FYGLPTLK-------IEIDP-YTAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTIG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +T+ +A + ++LPQA R  IPPL++ +++L+K++SLA
Sbjct: 133 MTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLA 169



 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+ TL    R+S ++L+ WI R+YV + R  P LV +F ++
Sbjct: 41  ILATLTALARISGSRLLQWIARIYVSIIRGTPLLVQLFIIF 81


>gi|91205978|ref|YP_538333.1| amino acid ABC transporter permease [Rickettsia bellii RML369-C]
 gi|122425299|sp|Q1RHC0|GLNP_RICBR RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|91069522|gb|ABE05244.1| Amino acid ABC transporter permease protein [Rickettsia bellii
           RML369-C]
          Length = 218

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 29/167 (17%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F  V+G++L+L       A RL   F+    +  PLL   + + F  P L  I +K+ +
Sbjct: 31  IFGLVIGVLLALCKVNKNRALRLFADFYTSIFRGTPLLIQLSIIYFASPYL--IGIKFTV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                FM+  I+ S  + A+++E++R+G+ AV +GQ EAA AL 
Sbjct: 89  ---------------------FMAGAISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +      + ++LPQA+++I P LT++ +NL+K S++    G  DL+ 
Sbjct: 128 IPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMFGEMDLMK 174


>gi|93005167|ref|YP_579604.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92392845|gb|ABE74120.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 222

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 18/133 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +++PLL +  +  F +P +   +A KY L  D                  F S  +A   
Sbjct: 61  RSVPLLLVLLWFYFAVPMIYFWVAGKY-LQLDT----------------AFTSCVVAFMM 103

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + AA+ +E+VR+G+ ++  GQ+ AA ALG+T+ +  RL++LPQA R ++P +  Q + L 
Sbjct: 104 FEAAYFSEVVRAGIQSIGSGQVNAAKALGMTYGQTMRLIILPQAFRKMLPLILQQCIILF 163

Query: 336 KNSSLAVAVGFAD 348
           ++++L  A+G  D
Sbjct: 164 QDTTLVFAIGLTD 176


>gi|319782303|ref|YP_004141779.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168191|gb|ADV11729.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 255

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 2/175 (1%)

Query: 226 TFLIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           T L+ G+P L++I L +   + F   V+  F + G +     F+   IA+   + A+  E
Sbjct: 81  TSLVRGVPELLIIYLLFFSSVEFVTKVVTAFGYAGVAESGYAFVIAVIAIGAISGAYSTE 140

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR  L A+P G +EAA ALGL+  +  R ++ PQ +R  +P + + +   +K+++L   
Sbjct: 141 VVRGALGAIPNGHIEAARALGLSGGRIFRRIIAPQMLRIAVPGINNVWQTTIKDTALVSV 200

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG  +L+ +     N T       LI   +YL+++++     + +   + ++ +K
Sbjct: 201 VGLQELMRISFIGANSTRHPFIFYLIAAVVYLAITLVSQAGFDGIERLLRVRTRK 255


>gi|295395027|ref|ZP_06805237.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972094|gb|EFG47959.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 529

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 27/177 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL  + F  FGLP L+                        T    F++    L+  
Sbjct: 375 RGTPLLVWAFFFYFGLPQLM-----------------------GTKGDVFIAGVATLALN 411

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EIVR G+ AV  GQMEAA +LGL   K+ + V++PQA++   P + +Q +  LK
Sbjct: 412 AGAYLTEIVRGGIQAVDVGQMEAARSLGLPWGKSMQKVVVPQAVKIATPSIINQLVITLK 471

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN----RLN 389
           +SSL + +GFA+L+     +     +  E+++I   IY  +  ++    N    RLN
Sbjct: 472 DSSLLLTIGFAELLYQAQQVYASNFRTTEMLIIVGVIYFVIITVLTWIANIVDRRLN 528



 Score = 36.6 bits (83), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G  NT  +       A ++G + G  ++S N+++A I  V+V +FR  P LV  FF
Sbjct: 326 ALAKGLWNTLAITVVSFAIAMVLGLVFGFMKVSQNRVLAGIASVFVAIFRGTPLLVWAFF 385

Query: 148 LY 149
            Y
Sbjct: 386 FY 387


>gi|167033328|ref|YP_001668559.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166859816|gb|ABY98223.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 239

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 23/184 (12%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250
           LG+V++L A         ++ K LP  + +TF  +  GLP   TL++I    Q+   K +
Sbjct: 40  LGLVVALAA---------RSRKRLPRAWATTFSTVFRGLPELLTLLIIYYGCQIAAQK-I 89

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L    + G   ++  F++  IA S   AAF +EI  +    +P+GQ+EA  ALGL+ R  
Sbjct: 90  LAAMGYEGEFLIN-TFLAAMIAFSLVFAAFSSEIWLAAFKTLPKGQLEACSALGLSKRTG 148

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              VLLPQ  R  +P L++ +L+LLK++SL   +   DL       + QT  A+ +    
Sbjct: 149 FFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDL-------MRQTNLAVSVTKEP 201

Query: 371 MFIY 374
           MF Y
Sbjct: 202 MFFY 205


>gi|113868713|ref|YP_727202.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527489|emb|CAJ93834.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 216

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F    ++G+ L+L  +R  R     TG      Y+   L+ G+P  V++ + Y       
Sbjct: 27  FAGGALVGVPLALARSRGGRVLRTLTGA-----YVQ--LVQGVPLPVIMFVVY------- 72

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F    G    P  ++  IA++ Y++A++ EI +  + AVPR Q EAA  L LT  +
Sbjct: 73  ----FGISVGGFELPALVAAGIAMTAYSSAYLGEIWKGCIQAVPRTQWEAAECLALTPLQ 128

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+LPQA R  I P  S  + ++KNSS AV +GF DL      + N T +   +  I
Sbjct: 129 RAVYVILPQAARIAIAPTVSFLVQIVKNSSYAVVIGFFDLTYSARVVNNSTFKPFLVFTI 188

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
              +Y ++   ++    RL  +
Sbjct: 189 AAALYFAICYPLSSLSYRLERR 210


>gi|88601349|ref|YP_501527.1| amino acid ABC transporter permease [Methanospirillum hungatei
           JF-1]
 gi|88186811|gb|ABD39808.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Methanospirillum hungatei JF-1]
          Length = 223

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 76/135 (56%), Gaps = 7/135 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L  + AA+ +++ R  + ++  GQM AA +LG++  +A + ++LPQA+R  
Sbjct: 85  PAFYVGAVVLGLWGAAYQSQVFRGAIQSISEGQMIAARSLGMSRFQAIKSIILPQALRIA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P  ++QY  +L  SS+  A+G A+L++    I++QT        + M IYL+ +++  L
Sbjct: 145 LPGWSNQYPEILTESSVCYAIGVAELLTRSSQIVSQT-------YVTMPIYLACAVIFIL 197

Query: 384 FMNRLNAKIALKEKK 398
                 + I + EKK
Sbjct: 198 LSYAGTSCIHMVEKK 212


>gi|218462904|ref|ZP_03502995.1| nopaline ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 249

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 2/156 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T+   G P LV + L Y      P++ Q +F+      P F   +IA +  +AA   E++
Sbjct: 57  TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVPRGQ+EAA +LGL+     RL++ P  +R  +P   ++ + +LK SSLA  + 
Sbjct: 115 RGGIQAVPRGQIEAAKSLGLSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTIT 174

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  +   ++++T    E+ +     Y+ L+++I
Sbjct: 175 LLEVTGLARQLVSETFAPYEVFIAAGAFYMLLTLLI 210


>gi|166031609|ref|ZP_02234438.1| hypothetical protein DORFOR_01309 [Dorea formicigenerans ATCC
           27755]
 gi|166028586|gb|EDR47343.1| hypothetical protein DORFOR_01309 [Dorea formicigenerans ATCC
           27755]
          Length = 236

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 77/122 (63%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+RSG+ +V  GQMEA  A+GL+   +   +++PQA+++I+P L +++++L+K
Sbjct: 114 SGAYISEIMRSGIQSVDSGQMEAGRAVGLSFGTSMMKIVIPQAVKNILPTLGNEFISLIK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG ADL      I + + + +   L+   IY++L ++I+L +  +   +   +
Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIALVLIISLLIKLMERSLKKSD 233

Query: 397 KK 398
           ++
Sbjct: 234 RR 235



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL-----SANKLV 125
           ++++ I  +   + YA  I  G  NT  +A +G+I   I+GTL+   R+     +  K++
Sbjct: 7   KVNKFIEIFVEQNGYAKVIQ-GLQNTLLIAVTGLIIGIIVGTLIATVRVLPKYKTLPKVL 65

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             IC  YV +FR  P +V +   Y  +L ++
Sbjct: 66  NGICSFYVALFRGTPMVVQLLVFYYVLLPII 96


>gi|120406518|ref|YP_956347.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119959336|gb|ABM16341.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 503

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 20/208 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SFV+G+V++L    L+R         L   YIS  +I G P LV +   + + F  P 
Sbjct: 310 IISFVIGLVIAL-GVALARLSSNVVLTNLARFYIS--VIRGTPLLVQL---FIVFFALP- 362

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             +F    G  + P F +  IA S     + AEI+RS + ++P+GQ EAA  +GL +   
Sbjct: 363 --EF----GVRIDP-FPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYAGT 415

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-----AIE 365
            R ++LPQA R  +PPL++  ++L+K++SLA  +   +L+     I   T +        
Sbjct: 416 LRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPTFEFFALYGTA 475

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  W+ I L LS   A F  RL   +A
Sbjct: 476 AVYYWV-ICLVLSFGQARFERRLERYVA 502


>gi|121606946|ref|YP_984275.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120595915|gb|ABM39354.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 216

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 5/164 (3%)

Query: 238 IALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAV 292
           +AL  Q+    P+L Q    + G S +  +  +L+ A  C   Y +A++ EI R  ++++
Sbjct: 53  VALYVQVFQGTPLLMQLFLTYFGLSMLGIDTSALFAASVCLTLYASAYLTEIWRGCVLSI 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ EAA +L +   +  R ++LPQA R  I P     + ++K ++LA  +GF ++   
Sbjct: 113 PRGQWEAAASLAMNFGEQLRHIVLPQAARIAIGPTVGFLIQIIKGTALASVIGFVEITKA 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I N T +   +      +Y +L   ++++   L  K++ + 
Sbjct: 173 GQMIANATYEPFLVYGCVGLMYFALCFPLSVWSRNLERKLSPRR 216


>gi|320177113|gb|EFW52129.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella dysenteriae CDC 74-1112]
          Length = 367

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 52/76 (68%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQ ++ +IP L +  + L 
Sbjct: 241 FQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQVLKLVIPGLVNTIIALF 300

Query: 336 KNSSLAVAVGFADLVS 351
           K++SL + +G  DL S
Sbjct: 301 KDTSLVIIIGLFDLFS 316


>gi|167745442|ref|ZP_02417569.1| hypothetical protein ANACAC_00133 [Anaerostipes caccae DSM 14662]
 gi|317473006|ref|ZP_07932308.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|167655163|gb|EDR99292.1| hypothetical protein ANACAC_00133 [Anaerostipes caccae DSM 14662]
 gi|316899515|gb|EFV21527.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 223

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 72/116 (62%), Gaps = 1/116 (0%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+  +A S   AA+ AEI RSG+ A+P GQ EAA  LG    +    ++LPQ ++ I+PP
Sbjct: 95  MAAVVAFSLNYAAYFAEIYRSGIQAIPNGQYEAAKVLGFGKAQTFFKIILPQVVKIILPP 154

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           + S+ + L+K++SLA  +G  ++  V    ++++ + +E +++    YL ++++++
Sbjct: 155 MGSECMTLVKDTSLAHVIGVMEIYVVAANNMSRS-RGMEYLIVAGIFYLIMNMIVS 209


>gi|221067527|ref|ZP_03543632.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220712550|gb|EED67918.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 266

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 2/123 (1%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L I LS  TAA +AE+ R+G++AVPRGQ +AA +LGLT  +    ++ PQA+R IIP 
Sbjct: 142 LTLPIGLS--TAAVVAEVYRAGVLAVPRGQTDAARSLGLTEAQVFFFIVFPQALRYIIPA 199

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q + ++K+++    V + +L+     +I      + + LI   +Y  ++  I+    
Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQSAKVLIANYHSLVPVYLIVAALYCLVNYGISKASQ 259

Query: 387 RLN 389
           RL 
Sbjct: 260 RLG 262


>gi|86358032|ref|YP_469924.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282134|gb|ABC91197.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 268

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238
            L +     + + +  +G+V+  F   L +   EK+ +    +Y + F   GLP L+ L 
Sbjct: 50  ALGLQVTVSVAIVTLPIGLVIG-FLVALGQQSEEKSLRLAAGIYTTIFR--GLPELLTLF 106

Query: 239 ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            + Y +    + +L    ++G       F++  IALS   +A+ +E++ S   A+P+GQ 
Sbjct: 107 IIYYGMQMLIQSLLELAGYVGPPVEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQY 166

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  +LGL   +  RLV+LPQ +R  +P LT+ ++ LLK++S    +  AD       I+
Sbjct: 167 EAGDSLGLHRGRTLRLVILPQLVRIALPGLTNLWMVLLKDTSYVSIISLAD-------IL 219

Query: 358 NQTGQAIEI 366
            QT  A+ +
Sbjct: 220 RQTSVAVRV 228


>gi|49081976|gb|AAT50388.1| PA0890 [synthetic construct]
          Length = 233

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEILAGSLKATPLGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+ +Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLVDITGAARTVYSQYYLPFEAFITAGLFYLCLTFILVRLF 216


>gi|77414369|ref|ZP_00790524.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77159559|gb|EAO70715.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
          Length = 174

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 19/182 (10%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLY 270
           H +  + L  ++IS  L+ G+P +VL+ L Y   F  P +G Q + +  S V    MS  
Sbjct: 5   HLRLLRYLANIHIS--LMRGIPLMVLLFLIY---FGLPFIGIQLDAVTASIVGFTMMS-- 57

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
                  +A+I+EI+R+ L+AV  GQ EAA ALGL      R +++PQA R  +P L++ 
Sbjct: 58  -------SAYISEIIRAALLAVDHGQWEAARALGLKTPTIYRGIIIPQATRIALPSLSNV 110

Query: 331 YLNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            L+++K SSL   +   D+ +    VGGT  +     I + LI+  I    +I+   +  
Sbjct: 111 LLDMVKGSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVALIYWVICTLYAIIQDWWEK 170

Query: 387 RL 388
           RL
Sbjct: 171 RL 172


>gi|309388402|gb|ADO76282.1| amino acid ABC transporter membrane protein, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 220

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 77/137 (56%), Gaps = 21/137 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    FL FGLP ++            P    FN + G T++       I LS  
Sbjct: 62  RGTPLITQLFFLYFGLPQII------------PF---FNRVNGFTIA------IIGLSLN 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++E +R  + ++ +GQMEA++++G+++ +A R +++PQA R  IP L + ++N++K
Sbjct: 101 SGAYMSEAIRGAISSIDKGQMEASLSVGMSYFQAMRRIIMPQAARVAIPTLFNSFINIIK 160

Query: 337 NSSLAVAVGFADLVSVG 353
            ++L   +G  ++++  
Sbjct: 161 GTALTFTIGVTEVMATA 177


>gi|251791414|ref|YP_003006135.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540035|gb|ACT08656.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 221

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 14/199 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF LG++L +    L R +  K  K +   Y+  ++I G P LV + L +        
Sbjct: 28  ILSFALGLMLGVLVALL-RLYGPKPLKKICDFYV--WVIRGTPLLVQLFLIF-------- 76

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              +           F +  I  S    A+ +EIVR  +++VP+GQ  AA +LG++  +A
Sbjct: 77  ---YGLPNAGITLDAFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWNAAYSLGMSGAQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V++PQ++   +PPL + +++L+K++SLA  +   ++      I++ T + + + +  
Sbjct: 134 IRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVSVTYEPLFLYIEA 193

Query: 371 MFIYLSLSIMIALFMNRLN 389
             IYL  S +++    RL 
Sbjct: 194 ALIYLMFSTVLSKLQARLE 212


>gi|296876762|ref|ZP_06900810.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296432264|gb|EFH18063.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 213

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 24/185 (12%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           +LT+   A + + S  LGIV++      S+  H        LL I  +++ G P L+   
Sbjct: 16  SLTLQVFAFVLILSIPLGIVVAFLLQLRSKILHG-------LLTIYIWVMRGTPLLL--- 65

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQ 296
              QL F   VL         ++      L  A+  +T   AA+ AEI R G++A+P GQ
Sbjct: 66  ---QLIFIYYVL--------PSIGIRIDRLPAAIMAFTLNYAAYFAEIFRGGIVAIPTGQ 114

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA  L L+  +  R ++LPQ ++ ++P + ++ ++L+K++SL  A+G +DL+    T 
Sbjct: 115 YEAAKVLKLSSWQTIRYIILPQVVKIVLPSVFNEVMSLIKDTSLVYALGISDLILASRTA 174

Query: 357 INQTG 361
            N+  
Sbjct: 175 ANRDA 179


>gi|320007606|gb|ADW02456.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 291

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 46/228 (20%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V S  LG VL++   RLS H         P+ ++ST L+     +P LV+I
Sbjct: 75  TLKAFAYAAVLSLALGAVLAV--GRLSVH--------KPVRWVSTVLVEFFRAMPVLVMI 124

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                ALK Q                        +L   L+ Y  + +AE+ R+G+ +V 
Sbjct: 125 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINSVE 163

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA ALG+   + T  VL PQA+R+++P + SQ +  LK++SL   + + + +  G
Sbjct: 164 RGQGEAAYALGMRKTQVTTHVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 223

Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNRLNAKIALKEKK 398
             I +     +  I + M    IY+ + ++++ F       +A +E++
Sbjct: 224 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWFAT----WVARRERR 267



 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           +G ++  GRLS +K V W+  V VE FR +P LV+IFF++ + L V P+P
Sbjct: 89  LGAVLAVGRLSVHKPVRWVSTVLVEFFRAMPVLVMIFFIFVA-LKVQPLP 137


>gi|226313305|ref|YP_002773199.1| arginine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226096253|dbj|BAH44695.1| arginine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 219

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 68/117 (58%), Gaps = 11/117 (9%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F  P L  +N         +  +  +  +  + A+I+E +R G++AV +GQ EAA AL
Sbjct: 74  VYFATPQLTGYNI-------SQLEAAVLTFTLNSGAYISETIRGGILAVDKGQWEAAKAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS----VGGTI 356
           G+ + +    ++LPQA+++I+P L ++ + LLK S+L   +G AD++     V GTI
Sbjct: 127 GVPYHRMMLDIILPQAVKNILPALVNETIALLKESALVSTIGLADIMQNANVVKGTI 183


>gi|224499026|ref|ZP_03667375.1| hypothetical protein LmonF1_04713 [Listeria monocytogenes Finland
           1988]
          Length = 235

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH ++ R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQSIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|163844812|ref|YP_001622467.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163675535|gb|ABY39645.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 226

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 61/95 (64%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +P
Sbjct: 89  FPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PL++ +++L+K++SLA A+   +L      I+  T
Sbjct: 149 PLSNTFISLIKDTSLAAAITVPELFQSAQRIVATT 183


>gi|121608673|ref|YP_996480.1| glutamine ABC transporter permease [Verminephrobacter eiseniae
           EF01-2]
 gi|121553313|gb|ABM57462.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 228

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 66/116 (56%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR   ++VPRG  EA +A+GL H +    V+ P A R + P L +Q++  LK
Sbjct: 110 SGAYIAEIVRGAFLSVPRGLAEAGLAMGLPHWRVLAFVVGPVAFRRMTPALGNQFIVSLK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL + +G  +L   G  I+    +A+EI      IYL L  ++ L +  L  ++
Sbjct: 170 DTSLFIVIGVGELTRQGQEIMATNFRAVEIWTAVAVIYLLLIGVLTLGLRVLEKRM 225


>gi|145221824|ref|YP_001132502.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145214310|gb|ABP43714.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
          Length = 503

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 20/208 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SFV+G+V++L    L+R         L   YIS  +I G P LV +   + + F  P 
Sbjct: 310 IISFVIGLVIAL-GVALARLSSNVVLSNLARFYIS--VIRGTPLLVQL---FIVFFALPE 363

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G         + P F +  IA S     + AEI+RS + ++P+GQ EAA  +GL +   
Sbjct: 364 FG-------VKIDP-FPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYVGT 415

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-----AIE 365
            R ++LPQA R  +PPL++  ++L+K++SLA  +   +L+     I   T +        
Sbjct: 416 LRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQIIAAPTFEFFALYGTA 475

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  W+ I L LS   A F +RL   +A
Sbjct: 476 AVYYWV-ICLVLSFGQARFEHRLERYVA 502


>gi|260460788|ref|ZP_05809038.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033365|gb|EEW34626.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 22/237 (9%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D +IV P+   L         LT+   A  FVF  +  I + L+A  +          A 
Sbjct: 5   DFTIVAPYWDLLVTGAWWTAVLTISAGALSFVFGILFAITV-LYAPAI---------LAY 54

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P+  +  +L  G P L+ + L Y           F  +      P   +  + L  + A 
Sbjct: 55  PVRAL-MWLFMGTPLLLQLFLIY-----------FGLVQVGIDIPALAAGIVGLGLHFAV 102

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + A+++R+G++AV  GQ E A ++G    +  R V++PQA+R+  PP+ S  + LLK SS
Sbjct: 103 YNADVIRAGVVAVDIGQTEGARSIGFGKWQTLRYVVIPQAIRNTAPPIGSNLIALLKESS 162

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +G A+LV      I++T +  E  +    +Y  L++++   ++R    + +  
Sbjct: 163 VVSVIGIAELVHSAQLAISETFRPFEFYITAAALYYILNLVLEAALHRFERHVEVSR 219


>gi|312959433|ref|ZP_07773950.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311286150|gb|EFQ64714.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 242

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 6/187 (3%)

Query: 217 KALPLLYIS----TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYI 271
            +LP L I     T LI G+P LVL+ L +       + G  +F+    +  + F +  I
Sbjct: 54  SSLPFLRIPAQLYTTLIRGVPDLVLMLLIFY-SLQTWLTGLTDFMEWEYIEIDPFSAGVI 112

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L     A+  E  R  ++AVPRGQ+EAA A GL   +  R V  PQ MR  +P + + +
Sbjct: 113 TLGFIYGAYFTETFRGAILAVPRGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNW 172

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK ++L   +G ADLV         T Q    +++   IYL ++      + RL  +
Sbjct: 173 MVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERR 232

Query: 392 IALKEKK 398
            +   ++
Sbjct: 233 YSAGARE 239


>gi|300767622|ref|ZP_07077532.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|300494607|gb|EFK29765.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
          Length = 496

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+  G P L+    K                      P F++  I L   
Sbjct: 341 RGMPLMVLAFFIYIGFPDLIGHGFKI---------------------PAFVAGMITLMLN 379

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    V+ G  AV  GQMEAA +LGL +  A R V++PQ +R +IP   +Q++  LK
Sbjct: 380 EGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVIMPQGIRIMIPSFINQFIITLK 439

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++S+   +G  +L   G  II +  +  +I
Sbjct: 440 DTSILSVIGIVELTQTGTLIIARNFEGFKI 469


>gi|70730912|ref|YP_260653.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68345211|gb|AAY92817.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 213

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 3/137 (2%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +SP F +  + L   TAA ++E+ R    A+P+GQ EAA  L L+  +    V+LPQ +
Sbjct: 77  ALSP-FAAAVLGLGLITAAHMSEVYRGAFAAIPQGQYEAAQVLNLSAPQRFFDVMLPQLV 135

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  IP   +  + LLK+S++A  +G  D+      +  QT Q +E+  +   +YL LS+ 
Sbjct: 136 RIAIPTSATYAIGLLKDSAVASTIGVGDVSFQAYQMSQQTFQGLEVYSVAALVYLILSVP 195

Query: 381 IALFMNRLNAKIALKEK 397
           +ALF   L+A   LK++
Sbjct: 196 VALFSRWLSAT--LKQR 210


>gi|27382024|ref|NP_773553.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355194|dbj|BAC52178.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 213

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 77/132 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++S+ I  + ++ AF+ EI R  + AVP+GQ+EAA AL L +    + V+LPQA+R  +P
Sbjct: 82  WVSVSIGFTLHSGAFLGEIWRGAIEAVPKGQVEAAKALSLNYGSQMQDVVLPQAIRISLP 141

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  +GF +L+  G  + NQ  + + ++ +   +Y ++   ++L  
Sbjct: 142 ATIGFLVQLIKGTSLAAIIGFTELMRAGTIVSNQNFKPLLVLGLVCVLYFAICWPLSLVG 201

Query: 386 NRLNAKIALKEK 397
            +L  ++A+  +
Sbjct: 202 AQLERRMAVAAR 213


>gi|332042180|gb|EGI78506.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 224

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 24/134 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A P L +  F+ FGLP                      F+G     P+  ++ +     
Sbjct: 70  RAFPPLVLLVFVYFGLP----------------------FLGWEI--PKLGAVLLGFLLN 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AE+ R+GL AVP GQMEAA + GLT  +A R V++PQA+++++P L S  + ++K
Sbjct: 106 NAAYYAEVFRAGLEAVPSGQMEAARSTGLTRMQALRHVVVPQAVKNVLPDLVSNSIEVVK 165

Query: 337 NSSLAVAVGFADLV 350
            +++A  VG  +L+
Sbjct: 166 LTTIASVVGLPELL 179


>gi|227542731|ref|ZP_03972780.1| glutamate transporter permease protein GluD [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227181497|gb|EEI62469.1| glutamate transporter permease protein GluD [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 312

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 58/88 (65%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F  +   L+ Y  + IAE +R+G++++P GQ EAA ALGL+HR+    +LLPQA+ +++P
Sbjct: 142 FAGVVFGLTMYNGSVIAETLRAGILSLPTGQSEAAEALGLSHRQTIWNILLPQAVATMLP 201

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            L SQ +  LK+++L   + + ++V  G
Sbjct: 202 ALISQLVIALKDTALGYMILYVEVVRSG 229



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 42/72 (58%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+   +++ T IL G   T   A   ++ A IIG L+G GRLS NK + W C + VE FR
Sbjct: 55  PFLKSTTWTTYILPGLWGTLKAALVSIVFAIIIGALLGVGRLSKNKAIRWFCGIIVEFFR 114

Query: 138 NIPPLVVIFFLY 149
            IP L+++ F Y
Sbjct: 115 AIPVLILMIFAY 126


>gi|154246018|ref|YP_001416976.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154160103|gb|ABS67319.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 219

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 13/156 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYI  F   G P L+ + L +   F  P+LG         VSP + + +++L+ +++AF+
Sbjct: 55  LYIELFQ--GTPLLMQLFLIF---FGLPLLGL-------DVSP-WAAAFVSLTLWSSAFL 101

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R  + ++P+GQ EA+ +L ++  +  R V+LPQ+MR  +PP     + ++K ++L 
Sbjct: 102 AEIWRGCVESIPKGQWEASSSLAMSFVEQLRYVILPQSMRIAVPPTVGFSVQVVKGTALT 161

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
             +GF +L      I N T +   +      IY +L
Sbjct: 162 SIIGFVELSKAATIITNATFEPFTVYGFAALIYFAL 197


>gi|283954478|ref|ZP_06371998.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 414]
 gi|283794095|gb|EFC32844.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 414]
          Length = 219

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 23/225 (10%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + + F    +    KI + + ++ IV   F   +++++ +K  K L   YI  F   
Sbjct: 5   FNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDKLSKFLAACYIDIFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            L   +L A      F  PV  GQF         P+     I  S YT++ +AEI+R GL
Sbjct: 64  PLLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGL 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L
Sbjct: 110 NSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAEL 169

Query: 350 VSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387
                TI+ +     EI+        I+  I  SLS+++  +  +
Sbjct: 170 TYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 214


>gi|253690234|ref|YP_003019424.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756812|gb|ACT14888.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 244

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 93/163 (57%), Gaps = 14/163 (8%)

Query: 226 TFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278
           T+++F  G P LV + L Y        LGQF +I  S +      P + +L ++LS  T 
Sbjct: 55  TYVLFFRGTPLLVQLFLIYY------GLGQFQWIRESILWPFLREPHWCAL-LSLSLCTG 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+R GL +VP GQ+E+A A G+      + ++ P A+R  +P   ++ ++++K++
Sbjct: 108 AYACEIIRGGLQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKST 167

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SLA  +   ++  +   +I +T +A+E+ L+   IYL +++++
Sbjct: 168 SLASIITLMEITGIAARLIAETYRALEVFLVAGAIYLFINLIL 210


>gi|153837587|ref|ZP_01990254.1| membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|149749084|gb|EDM59895.1| membrane protein [Vibrio parahaemolyticus AQ3810]
          Length = 229

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+S  +ALS   A++ ++ +R  L AV RGQ EAA ALG++   A   ++LPQA+R
Sbjct: 87  VSP-FLSGVVALSLIFASYASQTLRGALKAVGRGQREAASALGISQFHAFVRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P LT+Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLL 174


>gi|139439417|ref|ZP_01772858.1| Hypothetical protein COLAER_01878 [Collinsella aerofaciens ATCC
           25986]
 gi|133775196|gb|EBA39016.1| Hypothetical protein COLAER_01878 [Collinsella aerofaciens ATCC
           25986]
          Length = 212

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 61/104 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA + +T+A +AEIVR GL ++PRGQ EAA + G       R ++LPQ  ++IIP L SQ
Sbjct: 85  IAFTLFTSAVMAEIVRGGLNSIPRGQFEAAQSQGFGFFATMRYIILPQTFKTIIPALFSQ 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
              ++K+SS    +  A+L+     ++       ++++++  ++
Sbjct: 145 CTTVIKDSSYLSGINVAELMYTANVVMAHAIDLSQVLMLYGLVF 188


>gi|332040230|gb|EGI76610.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 228

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 69/115 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + L  + +A++AEI+R GL++V RGQ EAA+A GL+  +    V+ PQA+R +
Sbjct: 90  PGFWAGALGLGLHGSAYVAEILRGGLLSVHRGQREAALAAGLSPLQVFVCVVWPQALRVM 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + PL + Y+ LLK+SSL   +   +L+     I +++   + I L+    Y +++
Sbjct: 150 LAPLLNTYVTLLKDSSLCALIATEELMLAARAIASESFLPLHIFLLVGVFYFAIA 204


>gi|170721102|ref|YP_001748790.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169759105|gb|ACA72421.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 215

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 59/95 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +M+  IAL+ +T+AF+AEI R  + ++P GQ EA+ +L L+  +  R V+LPQA+R  + 
Sbjct: 85  WMAAAIALTLFTSAFLAEIWRGCVESIPNGQWEASGSLALSRMEQLRHVILPQALRIAVA 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P     + ++K +++   +GF +L   GG + N T
Sbjct: 145 PTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 179


>gi|89897436|ref|YP_520923.1| hypothetical protein DSY4690 [Desulfitobacterium hafniense Y51]
 gi|89336884|dbj|BAE86479.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 236

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 24/177 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L                       G T+S E     + LS    +
Sbjct: 81  PLLIQVYFLYFGLPKL-----------------------GVTLS-ETACAILGLSFLGGS 116

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R G+ AV + Q+E+ ++LGL+  +  R V+ PQA    IP L +  + LLK +S
Sbjct: 117 YMAEALRGGMEAVSKSQLESGLSLGLSRWQLIRYVVFPQAFSFSIPALGANCIFLLKETS 176

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  A+   DL++V   +I    Q +E +L+ +  YL + + ++LF+  L  K+   E
Sbjct: 177 VLGAIAILDLMNVTKDLIGMYYQTVESLLMLVVSYLIILLPLSLFLTWLERKVRYAE 233


>gi|157826658|ref|YP_001495722.1| amino acid ABC transporter permease [Rickettsia bellii OSU 85-389]
 gi|157801962|gb|ABV78685.1| Amino acid ABC transporter permease protein [Rickettsia bellii OSU
           85-389]
          Length = 218

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 29/167 (17%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F  V+G++L+L       A RL   F+    +  PLL   + + F  P L  I +K+ +
Sbjct: 31  IFGLVIGVLLALCKVNKNRALRLFADFYTSIFRGTPLLIQLSIIYFASPYL--IGIKFTV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                FM+  I+ S  + A+++E++R+G+ AV +GQ EAA AL 
Sbjct: 89  ---------------------FMAGAISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +      + ++LPQA+++I P LT++ +NL+K S++    G  DL+ 
Sbjct: 128 IPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMFGEMDLMK 174


>gi|26990305|ref|NP_745730.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148547399|ref|YP_001267501.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24985259|gb|AAN69194.1|AE016554_1 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|148511457|gb|ABQ78317.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|313498469|gb|ADR59835.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 239

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 23/184 (12%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250
           LG+V++L A         ++ K LP  + +TF  +  GLP   TL++I    Q+   K +
Sbjct: 40  LGLVVALAA---------RSRKRLPRAWATTFSTVFRGLPELLTLLIIYYGCQIAAQK-I 89

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L    + G   ++  F++  IA S   AAF +EI  +    +P+GQ+EA  ALGL+ R  
Sbjct: 90  LAAMGYQGEFLIN-TFLAAMIAFSLVFAAFSSEIWLAAFKTLPKGQLEACSALGLSKRTG 148

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              VLLPQ  R  +P L++ +L+LLK++SL   +   DL       + QT  A+ +    
Sbjct: 149 FFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDL-------MRQTNLAVSVTKEP 201

Query: 371 MFIY 374
           MF Y
Sbjct: 202 MFFY 205


>gi|318077286|ref|ZP_07984618.1| glutamate transporter permease [Streptomyces sp. SA3_actF]
          Length = 269

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 92/163 (56%), Gaps = 16/163 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V +  LG V  +   RLS H   +   A  + +  +     +P L+++ + Y ++    
Sbjct: 48  MVIALPLGAVFGI--ARLSDHVWVRVPSATVVEFFRS-----IPVLIMMIVAYAVY---- 96

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q+  +  ST      ++   L  Y A+ +AEIVR+G++++P+GQ EAA A+GL   +
Sbjct: 97  --AQYTSV--STDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQ 152

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351
             R +LLPQ++ +++P + SQ + ++K++++  ++ GF++L++
Sbjct: 153 TMRSILLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELIN 195


>gi|152969452|ref|YP_001334561.1| arginine transporter permease subunit ArtQ [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206578434|ref|YP_002239487.1| arginine ABC transporter, permease protein ArtQ [Klebsiella
           pneumoniae 342]
 gi|238893923|ref|YP_002918657.1| arginine transporter permease subunit ArtQ [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288936335|ref|YP_003440394.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510609|ref|ZP_06549979.1| arginine transport system permease [Klebsiella sp. 1_1_55]
 gi|329998470|ref|ZP_08303107.1| arginine ABC transporter permease protein ArtQ [Klebsiella sp. MS
           92-3]
 gi|150954301|gb|ABR76331.1| arginine 3rd transport system permease protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206567492|gb|ACI09268.1| arginine ABC transporter, permease protein ArtQ [Klebsiella
           pneumoniae 342]
 gi|238546239|dbj|BAH62590.1| arginine 3rd transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891044|gb|ADC59362.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777325|gb|EFD85323.1| arginine transport system permease [Klebsiella sp. 1_1_55]
 gi|328538660|gb|EGF64756.1| arginine ABC transporter permease protein ArtQ [Klebsiella sp. MS
           92-3]
          Length = 238

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 20/223 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFHE----KTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V + V+G+VL+ LFA   S  +       TG     + LP + +  F+ FG   L+L   
Sbjct: 19  VCALVIGLVLAMLFAVLESVKWRPVAWLATGIVTILRGLPEILVVLFIYFGSSQLLLTLS 78

Query: 239 -ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                 L F + PV  Q  NF     VSP F+   IALS   AA+ ++ +R  L AVP+G
Sbjct: 79  DGFTIPLGFTQIPVQMQIENF----DVSP-FLCGAIALSLLYAAYASQTLRGALKAVPQG 133

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +
Sbjct: 134 QWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKS 193

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 194 IATRTQEPFNWYIIAAAIYLVITLLSQYILKRIDQRATRFERR 236


>gi|121608891|ref|YP_996698.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553531|gb|ABM57680.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 243

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 10/172 (5%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYT 277
           +++ T L  G P LV +   + L++    L Q+ +I  S   P     Y    +A +  T
Sbjct: 65  VWLYTGLFRGTPLLVQL---FMLYYG---LAQWPWIRESWAWPYLREAYGCAILAFTLNT 118

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+IAEI+   +   P G++EAA +LG+ H    R ++LP A+R  +P  +++ + L+  
Sbjct: 119 AAYIAEILAGQIRNTPHGEVEAARSLGMNHWLLLRRIVLPSALRRALPAYSNEVIMLMHA 178

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +S+A  V  ADL  +   I  +T    E  LI    YL L+  +A    R+ 
Sbjct: 179 TSVASLVTLADLTGIARQIYAETYNPFEPFLIAGIFYLVLTNALAWIFRRME 230


>gi|330960458|gb|EGH60718.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. maculicola str. ES4326]
          Length = 232

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P   S      +A S  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFSINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     TI  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTINAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|330942130|gb|EGH44787.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. pisi str. 1704B]
          Length = 219

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 8/152 (5%)

Query: 232 LPTLVLIALKYQLHF--DKPVLG----QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAE 283
           +P L+++ + Y   +  D  VLG    Q  F   STV    +F    + LS   +A+ AE
Sbjct: 20  MPALLVLIILYNFAYLYDHIVLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAE 79

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R GLI V  GQ EAA ALGL   +    ++LPQA+RSI+P   ++ + L+K +S+   
Sbjct: 80  IIRGGLIGVDAGQHEAAAALGLPVSRRIFRIILPQALRSILPSGFNEIIGLVKGTSIVYV 139

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +   +L      I N+T   I ++++    YL
Sbjct: 140 LALPELFYTVQVIYNRTQAVIPLLIVATVWYL 171


>gi|303247502|ref|ZP_07333774.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491198|gb|EFL51090.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 237

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 82/133 (61%), Gaps = 4/133 (3%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +S  F+S  + L   +AA+ ++I R  + ++P GQ++AA ALG++   A R ++LPQA+R
Sbjct: 96  LSSGFLSAVLVLGLTSAAYQSQIFRGAIQSLPPGQLKAARALGMSDAVAIRAIILPQALR 155

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI--WMFIYLSLSI 379
             IP  +++Y  LLK+S+LA  +G  +++S   ++   T Q + + L+   +F +L+ + 
Sbjct: 156 LAIPAWSNEYSILLKDSALAFTIGVLEVMSRTRSVAALTHQPLPLSLLAGALFFFLTWAG 215

Query: 380 MIALFMNRLNAKI 392
           + AL   RL AK+
Sbjct: 216 IKAL--KRLEAKV 226


>gi|307329671|ref|ZP_07608829.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306884729|gb|EFN15757.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 289

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 46/219 (21%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI-----ALKY 242
           V S  LG VL+  A RLS H         P+ +++T L+     +P LV+I     ALK 
Sbjct: 82  VLSLALGGVLA--AGRLSEH--------RPVRWVATLLVEFFRAMPVLVMIFFVFVALKV 131

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           Q                        +L   L+ Y  + +AE+ R+G+ +V RGQ EAA +
Sbjct: 132 Q---------------------PLPALVTGLTLYNGSVLAEVFRAGVNSVDRGQREAAYS 170

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    VL+PQ +R+++P + SQ +  LK++SL   + + + +  G  I +    
Sbjct: 171 LGLRKTQVMTSVLVPQGVRAMLPAIISQLVVALKDTSLGFLITYEEFLHAGKLIASNLDY 230

Query: 363 AIEIILIWMF---IYLSLSIMIALFMNRLNAKIALKEKK 398
            +  I + M    IY+ + ++++ F N     +A +E++
Sbjct: 231 DLPFIPVVMVISPIYIGMCMLLSWFAN----WVAKRERR 265



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           +G ++ AGRLS ++ V W+  + VE FR +P LV+IFF++ + L V P+P
Sbjct: 87  LGGVLAAGRLSEHRPVRWVATLLVEFFRAMPVLVMIFFVFVA-LKVQPLP 135


>gi|119945610|ref|YP_943290.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119864214|gb|ABM03691.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 223

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 99/181 (54%), Gaps = 25/181 (13%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY--ISTFLIF--G 231
           L + ++TM+     F F+ +L ++L++      R F       +PLL+   S F+ F  G
Sbjct: 18  LKYLSVTMEMALLGFCFAIILAVILAVV-----RVFK------IPLLHNLASVFISFFRG 66

Query: 232 LPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            P LV L  L Y L    P+    +          F +  I L+ + +A++AE +R+ ++
Sbjct: 67  TPLLVQLFLLYYGLPQVMPIFAGVD---------AFSAAIIGLTLHFSAYMAESIRAAIM 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V + QMEA +++G+T  +A R ++LPQA R   P L + +++++K++SLA  +G A+++
Sbjct: 118 GVDKSQMEACLSIGMTRLQAMRRIILPQAARVATPSLMNYFIDMIKSTSLAFTLGVAEIM 177

Query: 351 S 351
           +
Sbjct: 178 A 178


>gi|296139503|ref|YP_003646746.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296027637|gb|ADG78407.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 227

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 52/78 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS YTAAF+ E +RSG+  VP GQ EAA ALGL        ++LPQA+R+++ P+ S 
Sbjct: 101 LGLSFYTAAFVCETLRSGINTVPVGQAEAARALGLPFFTVFGTIVLPQAIRAVVAPMGSV 160

Query: 331 YLNLLKNSSLAVAVGFAD 348
            + L KNS++A  +G ++
Sbjct: 161 LIALTKNSTIASVIGVSE 178


>gi|227112140|ref|ZP_03825796.1| octopine transport system permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|227326809|ref|ZP_03830833.1| octopine transport system permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 238

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 12/187 (6%)

Query: 220 PLLYIS---TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           P+ Y++   T LI G+P L++I L Y      L     + G   F G     P F++  I
Sbjct: 56  PVRYLADGYTTLIRGVPDLLIIYLLYFGGSSALTLLAKLFGSNEFFG----FPGFLAGVI 111

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A+   + A   E+ R    AV +G++EAA A G+      R +++P  +R  IPPL + +
Sbjct: 112 AVGISSGAQQTEVYRGAFYAVSKGEIEAAKACGMPTLLRLRRIIIPLLLRHAIPPLGNVW 171

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +LK S+L    G A+L++   T    TG+  +  +    +YL++SI     M R  + 
Sbjct: 172 QLVLKTSALVSVTGVAELLTQAQTGAGSTGKPFDFFMAAALLYLAISICSGWIMRRAESH 231

Query: 392 IALKEKK 398
            +   K+
Sbjct: 232 YSRGVKR 238



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 35/69 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +  +   +L+G   T  LA  G +   +IGT+    ++  N+ V ++   Y  + R +P
Sbjct: 13  GEHGWGKLLLIGAGMTLALAIGGFLLGAVIGTIGAWSKICGNRPVRYLADGYTTLIRGVP 72

Query: 141 PLVVIFFLY 149
            L++I+ LY
Sbjct: 73  DLLIIYLLY 81


>gi|170691880|ref|ZP_02883044.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143164|gb|EDT11328.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 225

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 13/217 (5%)

Query: 170 FLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +++RG  LS   +T+       +     G VL++F+   +R     T       Y+S F
Sbjct: 9   LIDSRGVLLSGMQVTLQITVVAILVGLAWGTVLAIFSLSANRALRLFTQT-----YVSLF 63

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P LV++ L + L   + +    N    STV    +S   A S   AAF  EI+R+
Sbjct: 64  R--SIP-LVMLLLWFYLIVPQLLKALLNL--PSTVDLRLVSALTAYSLLEAAFFCEIIRA 118

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  +P GQ++A  ALG+T  +  R V+LPQA R+++P   +Q + + +++SL   +   
Sbjct: 119 GIAGLPSGQLQAGYALGMTSMQTLRYVILPQAFRAMVPLALTQCIVIFQDTSLVYVIALG 178

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIAL 383
           D       I  + G  + ++++    Y ++ ++MIA+
Sbjct: 179 DFFRRLTAIGERDGTIVPVLIVAGVAYWAITTLMIAI 215


>gi|257139193|ref|ZP_05587455.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 262

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           V    LG+ L+L    L        G  +A+P+L +  +  F LP L        LH D 
Sbjct: 57  VLGVALGVALALATGALRGALIVVIGFFRAIPVLMLIFWTYFLLPVL--------LHADV 108

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L                ++  ALS    A++A  V +G+ A   GQ +A ++LGLT R
Sbjct: 109 PGLA---------------AVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRR 153

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +  R VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 QTVRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204


>gi|217963555|ref|YP_002349233.1| L-cystine transport system permease protein TcyM [Listeria
           monocytogenes HCC23]
 gi|217332825|gb|ACK38619.1| L-cystine transport system permease protein TcyM [Listeria
           monocytogenes HCC23]
 gi|307571869|emb|CAR85048.1| polar amino acid ABC transporter, permease protein [Listeria
           monocytogenes L99]
          Length = 236

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 32  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 81

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG++AV  GQMEAA ++G 
Sbjct: 82  LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQMEAAYSVGY 141

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 142 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 201

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 202 AFIGAALIYWFLTILIEAINYILEKNIA 229


>gi|326793483|ref|YP_004311303.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326544247|gb|ADZ89467.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 216

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 5/160 (3%)

Query: 237 LIALKYQLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIA 291
           L+A+  +L    P+L Q    F G S +  E   + +  +AL+ +T+AF+ EI R  +  
Sbjct: 52  LVAVYIELFQGTPLLMQMFLCFFGVSLLGYEISAWSAAILALTLFTSAFLVEIWRGCIDT 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EA+  LG++  +  R ++LPQA+R  I P     + ++K ++LA  +GF +L  
Sbjct: 112 LPKGQWEASRCLGMSFLQILRYIILPQALRVAIAPTVGFSVQVVKGTALASVIGFVELTK 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  + N T +  ++  +   IY  L   ++L    L  K
Sbjct: 172 AGTMLNNATFEPFKVFAMVAVIYFLLCYPLSLSSKILEKK 211


>gi|320531679|ref|ZP_08032619.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136099|gb|EFW28107.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 218

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 65/115 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F S+ +AL   ++ F+ E VRSG+ +VP+GQ+EAA ALG+      R ++LPQA+   
Sbjct: 82  PLFWSVVVALIFSSSGFVCETVRSGINSVPKGQIEAARALGMPFGLIIRGIVLPQALART 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           I PL + ++  L  SSLA A+G  +L +V   I       +   L     YL+++
Sbjct: 142 IQPLVNIFIACLIGSSLAAAIGVVELTAVTQKINQDRAAGVITFLTSGLTYLAIA 196


>gi|15888716|ref|NP_354397.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15156458|gb|AAK87182.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 219

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 63/114 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  + L  + AAF+ EI R  + +V +GQ EA+ +L +   +  R V+LPQAMR  
Sbjct: 84  PAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQMRYVILPQAMRVA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           IPP    ++ ++K +++   +GF +L   G  + N T Q   +  +   IY +L
Sbjct: 144 IPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFAL 197


>gi|116670891|ref|YP_831824.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116611000|gb|ABK03724.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 221

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+SP + S  IA S     + AE++R+ +++VP+GQ EA   +G++ R++   ++LPQ
Sbjct: 83  GVTISP-WPSAIIAFSLNVGGYAAEVIRAAILSVPKGQWEAGHTIGMSRRQSLVRIILPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLA 341
           A R  +PPL++ +++L+K++SLA
Sbjct: 142 AARVSVPPLSNTFISLVKDTSLA 164


>gi|29840303|ref|NP_829409.1| amino acid ABC transporter, permease protein [Chlamydophila caviae
           GPIC]
 gi|29834652|gb|AAP05287.1| amino acid ABC transporter, permease protein [Chlamydophila caviae
           GPIC]
          Length = 217

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 21/211 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RG  +   T+  +    +F  +LG+++    T  SR+F  +  + L  LY++  +I G P
Sbjct: 13  RGCGY---TLCVSGISILFGSLLGLII---GTMTSRYFPCRITRWLGNLYVT--VIRGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             + I + Y   F  P + + +           M+  IALS  ++A++AE +R G+ A+ 
Sbjct: 65  LFIQILIFY---FGLPSIIRLD-------PTPLMAGLIALSINSSAYLAESIRGGINALS 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+A  LG    +    ++ PQ  ++I+P LT++++ L+K SS+ + VG  +L  V 
Sbjct: 115 VGQWESAKVLGYKKSQIFAYIIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVS 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
             I+++    +E+  I   +YL   +M +LF
Sbjct: 175 KDIVSRELNPMEMYSICAALYL---LMTSLF 202


>gi|23098014|ref|NP_691480.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776238|dbj|BAC12515.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 237

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 7/129 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+     A+++E+VRS ++AV +GQ EAA AL ++  +  RLV+ PQA+R ++P   + 
Sbjct: 108 IAIGLNYGAYLSEVVRSSILAVSKGQSEAATALNMSRFQRMRLVIFPQAVRMMLPEFGNY 167

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + +LK +SL   +G  D++  G ++ N    + G  I  + +  +  L+L +   +F  
Sbjct: 168 TIQILKGTSLVSLIGLQDILYHGESLRNVSSMEMGGLIYFVALIFYFVLALPL---IFFT 224

Query: 387 RLNAKIALK 395
           R   KIA K
Sbjct: 225 RKAEKIAKK 233


>gi|323529955|ref|YP_004232107.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386957|gb|ADX59047.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 248

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 24/163 (14%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP+L        +H D                 E  +  +A++    A+  EIVR
Sbjct: 75  FVFFGLPSL-------GIHID-----------------EIQAAILAMTVNLGAYAIEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ++AA ALGL  R+  R ++LPQA+ ++ P L SQ L ++  S++   +  
Sbjct: 111 AGIDSISRGQVQAAQALGLHGRQVFRYIVLPQALANVFPALLSQVLIVMLGSAVVSQISV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            DL      I ++  ++ E  +I    YL LSI +   +NR  
Sbjct: 171 PDLTYAANFIQSRNFRSFESYVIITATYLLLSIALRQILNRFG 213


>gi|157145940|ref|YP_001453259.1| hypothetical protein CKO_01693 [Citrobacter koseri ATCC BAA-895]
 gi|157083145|gb|ABV12823.1| hypothetical protein CKO_01693 [Citrobacter koseri ATCC BAA-895]
          Length = 225

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 17/163 (10%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+VL+  A R               L++    I G+P   LI + + + +  P+L   + 
Sbjct: 46  GVVLACLAWRFPGVIRNG-------LFLWAEFIRGIP---LIFVIFWMWYLLPMLTGSDL 95

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G  TV+       +AL+ +TAA +   V +G+ A+P GQ +A++  G    +A  L+LL
Sbjct: 96  PGAVTVT-------LALAWFTAASVMHSVYAGINALPAGQYDASVVQGFRPFQALWLILL 148

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PQ +R+++P LT  ++ LLK++SLA  V   +L +V G + N+
Sbjct: 149 PQVLRNVMPSLTGIFIGLLKDTSLAFIVNVPELTTVAGQVNNR 191


>gi|293606725|ref|ZP_06689078.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292814875|gb|EFF74003.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 230

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 15/164 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V S + G+ L+L       H   +     P+     F I   P LV I   Y +++  P
Sbjct: 35  LVLSVLAGVPLALL------HMSHRAAVWRPVAAYVQF-IRSTPLLVQI---YLVYYAVP 84

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L     I G+    E +   +A++ + AA+++EI+R G+ +VPRGQ+E A A G+ + +
Sbjct: 85  ML-----IPGAKGWSEMVLGIMAMTLHHAAYMSEIIRVGIESVPRGQIEGAKACGMNYHQ 139

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             R V+LPQA  + +PPL  Q   L+K++SL   +   +LV+ G
Sbjct: 140 RLRYVVLPQAFVNTLPPLLGQTAVLIKDTSLLSLITVFELVAAG 183


>gi|289522550|ref|ZP_06439404.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504386|gb|EFD25550.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 232

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 19/216 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           T  K   F+F L IV   F T       L R F  +    L   Y+   LI G P   L+
Sbjct: 20  TLMKGLAFTFELAIVAMFFGTILGVLLALGRSFGNRLLSWLCTAYVE--LIRGTP---LL 74

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A  + L+F  P  G    I  S VS  F+   +     +AA+ AE  R  + AV   Q +
Sbjct: 75  AQLFILYFALPPYG----IRLSAVSVAFLGFILN----SAAYQAEYTRGSIEAVGEDQFK 126

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LG+   +    V+LPQA+R  IP   ++++ LLK +S+A  +G  DL++ G  I +
Sbjct: 127 AAYSLGMGKWQTIFYVVLPQAIRWSIPAWMNEFIYLLKCTSIAYIIGAPDLLTQGKFIAS 186

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  Q   + LI   IYL + +     + ++  K+ +
Sbjct: 187 RNYQFFRVYLIVAIIYLVIVLAATWIVGKIEQKVQI 222



 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 13/105 (12%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S++ T ++ G   TF LA   M   TI+G L+  GR   N+L++W+C  YVE+ R  P L
Sbjct: 16  SNFGT-LMKGLAFTFELAIVAMFFGTILGVLLALGRSFGNRLLSWLCTAYVELIRGTPLL 74

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             +F LY +    LP        P+G+ L+   ++F    +++ A
Sbjct: 75  AQLFILYFA----LP--------PYGIRLSAVSVAFLGFILNSAA 107


>gi|291302057|ref|YP_003513335.1| polar amino acid ABC transporter inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
 gi|290571277|gb|ADD44242.1| polar amino acid ABC transporter, inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
          Length = 242

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 8/143 (5%)

Query: 257 IGGSTVSP-----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           IGG  + P      F    I L  + + + AE+ R+G+  VP+GQ EA  AL L  R   
Sbjct: 98  IGGWEIGPLDFGGPFFVGVIVLGIHYSTYTAEVYRAGIDGVPKGQWEAITALSLPKRYGW 157

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV--SVGGTIINQTGQAIEIILI 369
           + V+LPQA+R +IP L +  +++ K   + +A+G AD++  +      N  G A+E   I
Sbjct: 158 QHVILPQALRRVIPALGNYIISMFKEVPVLIAIGLADMIYKTQEFQAANFAG-AVEGYTI 216

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              I+L+ S  IA+ M +L  ++
Sbjct: 217 AGLIFLAASYPIAVAMRKLENRL 239


>gi|139439311|ref|ZP_01772753.1| Hypothetical protein COLAER_01769 [Collinsella aerofaciens ATCC
           25986]
 gi|133775335|gb|EBA39155.1| Hypothetical protein COLAER_01769 [Collinsella aerofaciens ATCC
           25986]
          Length = 382

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 94/186 (50%), Gaps = 2/186 (1%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F +  G+    +Y  + ++ G P +V   L Y   F       F     + +   F + 
Sbjct: 190 RFFKSIGRGFATIY--STIVRGTPMMVQGLLIYYAGFTVLRGMGFETAQANQIWSTFTAG 247

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + +S  + A++ E++R G+ ++  GQ EAA +LGL+  +A R V+ PQ +++ IP LT+
Sbjct: 248 LVTISLNSTAYMMEVLRGGIESIDAGQAEAARSLGLSQWQAMRKVVFPQGIKNAIPALTN 307

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +  +K+SS+   +G  DL+    T+     + +E+  + + +YL L+++ +  +    
Sbjct: 308 ELIINIKDSSVLSVIGVFDLMYATTTVAGVYYRQMEVYCVALVVYLILTLVASRLLEAFG 367

Query: 390 AKIALK 395
            K+  +
Sbjct: 368 KKLGAE 373


>gi|28377653|ref|NP_784545.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254555834|ref|YP_003062251.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308179813|ref|YP_003923941.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270486|emb|CAD63388.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254044761|gb|ACT61554.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308045304|gb|ADN97847.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 478

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PL+ ++ F+  G P L+    K                      P F++  I L   
Sbjct: 323 RGMPLMVLAFFIYIGFPDLIGHGFKI---------------------PAFVAGMITLMLN 361

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+    V+ G  AV  GQMEAA +LGL +  A R V++PQ +R +IP   +Q++  LK
Sbjct: 362 EGAYTGAFVKGGFAAVDDGQMEAARSLGLPYWTAMRKVIMPQGIRIMIPSFINQFIITLK 421

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++S+   +G  +L   G  II +  +  +I
Sbjct: 422 DTSILSVIGIVELTQTGTLIIARNFEGFKI 451


>gi|182441008|dbj|BAG24133.1| probable amino acid permease [Pseudomonas cichorii]
          Length = 228

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 1/135 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V SG+I++  GQ  AA ALG++  +  RL++LPQA+  +
Sbjct: 94  PALFTVVCALSLIGGAYLAHSVHSGIISLSSGQWAAAKALGMSSWQVLRLIILPQALPIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  +G  +L  V   + N+      EI L    +Y  +   + 
Sbjct: 154 LPSFLNQWISLIKDTSLAYVIGVGELSFVATQVSNRVMVYPTEIFLFIALVYFIICSALD 213

Query: 383 LFMNRLNAKIALKEK 397
           L  +RL    ++K+ 
Sbjct: 214 LIASRLAGTGSVKKS 228


>gi|323142250|ref|ZP_08077084.1| arginine ABC transporter, permease protein ArtQ
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413313|gb|EFY04198.1| arginine ABC transporter, permease protein ArtQ
           [Phascolarctobacterium sp. YIT 12067]
          Length = 218

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 12/175 (6%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS F   G P LV + L Y   F  P L  +     S +    +S        +AA+I
Sbjct: 56  IYISVFR--GTPLLVQLMLIY---FATPQLTSYTI---SALEAGVLSF----GLNSAAYI 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R G++AV +GQ E A++LG+   +    ++LPQA+++ +P L ++ + LLK+SSL 
Sbjct: 104 SEALRGGILAVDKGQWEGAMSLGVPKHRFLLDIILPQAIKNALPSLVNESIMLLKDSSLV 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G AD +     I  +T +A E  ++   +Y  L + +      L  K+ + +
Sbjct: 164 SVIGVADTLRWADLIQAKTFRAFEAFIVAAAVYYVLVMALNFLGGLLEKKVRVSD 218


>gi|119897620|ref|YP_932833.1| putative amino acid permease [Azoarcus sp. BH72]
 gi|119670033|emb|CAL93946.1| putative amino acid permease [Azoarcus sp. BH72]
          Length = 362

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 54/79 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++ + AA++AE +R  L+A+P GQ +AA ALGL   +  R +LLPQA+R+  P + + 
Sbjct: 231 VAITLFAAAYLAEAIRGALLALPDGQRQAAAALGLGWWQTQRHILLPQALRNATPSIANS 290

Query: 331 YLNLLKNSSLAVAVGFADL 349
           ++NL K++SL V V   +L
Sbjct: 291 FINLFKDTSLVVVVSLYEL 309


>gi|91789814|ref|YP_550766.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91699039|gb|ABE45868.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 219

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 21/196 (10%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTV 262
           ++R  H    +   +LYI   ++ GLP L+++ L Y     + FD P L           
Sbjct: 41  IARVSHNNLLRNAAVLYIQ--VLQGLPVLLVLFLAYFGLAYMGFDPPAL----------- 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               +   IAL  Y  A++A+I R  + +VP  Q EA+ +L +T  +  R ++LPQ++R 
Sbjct: 88  ----VIATIALGLYAGAYLADIWRGAMESVPYQQWEASSSLAMTRAQQFRFIILPQSVRI 143

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +PP     + L+KN+S+   VG+ DL+  G  I         +  I   +Y SL   ++
Sbjct: 144 SLPPTVGFLVQLIKNTSIVSVVGYIDLMRAGEHIETSLHSPFMVYGIVALLYFSLCFPLS 203

Query: 383 LFMNRLNAKIALKEKK 398
                L  K+    + 
Sbjct: 204 HLSKMLERKVHADRQN 219


>gi|295697138|ref|YP_003590376.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295412740|gb|ADG07232.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 219

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 73/129 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  I L  +  A  +EI RSGL++V  GQ EAA ALGL  +     V++PQ++ +I
Sbjct: 86  PGFEAAVIVLGGFYGALYSEIFRSGLMSVDFGQREAAEALGLRRKTTLLRVIVPQSLLAI 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP TS  ++L+K+++L + +G  +L+       ++T Q + + LI   +Y  +   ++L
Sbjct: 146 LPPGTSAAIDLVKDTALVITIGVGELMYQAYQAGSETFQYMNVFLIAGVLYFIVCYGLSL 205

Query: 384 FMNRLNAKI 392
            + R    +
Sbjct: 206 AVRRWERHV 214


>gi|308234142|ref|ZP_07664879.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Atopobium vaginae DSM 15829]
 gi|328943633|ref|ZP_08241098.1| hypothetical protein HMPREF0091_10323 [Atopobium vaginae DSM 15829]
 gi|327491602|gb|EGF23376.1| hypothetical protein HMPREF0091_10323 [Atopobium vaginae DSM 15829]
          Length = 287

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 60/96 (62%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RSG+ AV +GQ EAA ALG T  +  + V+LPQA+R +IP L +Q + ++K++++A 
Sbjct: 160 EVFRSGVHAVAKGQKEAAYALGFTRAQVLQKVVLPQAIRYVIPALIAQLVVVVKDTTVAY 219

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            V + DL+     +I      + + LI   IY++++
Sbjct: 220 VVSYPDLLQNARVLITNYDALVSVYLIVALIYIAIN 255


>gi|229820931|ref|YP_002882457.1| polar amino acid ABC transporter, inner membrane subunit
           [Beutenbergia cavernae DSM 12333]
 gi|229566844|gb|ACQ80695.1| polar amino acid ABC transporter, inner membrane subunit
           [Beutenbergia cavernae DSM 12333]
          Length = 224

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 1/75 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ Y AAF+ E +RSG+  VP GQ EAA A+GL+   A R+++LPQA R  I PL + 
Sbjct: 98  LGLAVYHAAFVCESIRSGVNTVPVGQAEAARAIGLSFLPAARIIILPQAFRGAIAPLGNT 157

Query: 331 YLNLLKNSSLAVAVG 345
            + L KNS++A AVG
Sbjct: 158 LIALTKNSTVA-AVG 171


>gi|170696123|ref|ZP_02887258.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170138938|gb|EDT07131.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 258

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 83/136 (61%), Gaps = 5/136 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +++  ALS    A+++  V +G+++V  GQ +AA++LGLT  +A R V+LPQA+R +
Sbjct: 94  PGLVAVVCALSLIGGAYLSHAVHAGIVSVGAGQQQAALSLGLTRWQALRHVVLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIA 382
           +P   +Q+++L+K++SLA  VG  +       + NQ    + I    +F+++ +  +++ 
Sbjct: 154 LPSFVNQWVSLVKDTSLAYIVGVPEFT----FLANQVNSRLMIYPAQIFVFVGIVYLVLC 209

Query: 383 LFMNRLNAKIALKEKK 398
             +  + +++ L+E++
Sbjct: 210 SALQWIASRMLLRERR 225


>gi|118470385|ref|YP_887852.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171672|gb|ABK72568.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mycobacterium smegmatis str. MC2 155]
          Length = 226

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 72/116 (62%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AE+ R+G+ A+P+GQ EAA AL L+  +    ++LPQ++  IIP L +  + + K+
Sbjct: 108 SAYTAEVYRAGIEALPKGQWEAATALNLSRARTWSRIVLPQSIAMIIPVLGNYLIQMFKD 167

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++L  A+G  ++++   +I   TGQ +E + I   +YL +S + +L + ++  + A
Sbjct: 168 TALLYAIGTLEVLTTARSIGQSTGQFLEPLTIAGLMYLIISYVSSLAIRQMERRYA 223


>gi|290893634|ref|ZP_06556616.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|290556836|gb|EFD90368.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
          Length = 235

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 31  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 80

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L  F   +F  G + +  P  + + IALS    A++ EI+RSG++AV  GQMEAA ++G 
Sbjct: 81  LVDFLSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIGQMEAAYSVGY 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 141 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    IY  L+I+I      L   IA
Sbjct: 201 AFIGAALIYWFLTILIEAINYILEKNIA 228


>gi|282864978|ref|ZP_06274032.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282560403|gb|EFB65951.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 295

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 42/214 (19%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V S  LG VL++   RLS H         P+ ++ST L+     +P LV+I
Sbjct: 75  TLKAFAYAAVLSLALGAVLAV--GRLSVH--------RPVRWLSTLLVEFFRAMPVLVMI 124

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                ALK Q                        +L   L+ Y  + +AE+ R+G+ +V 
Sbjct: 125 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINSVE 163

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA ALG+   + T  VL PQA+R+++P + SQ +  LK++SL   + + + +  G
Sbjct: 164 RGQREAAYALGMRKTQVTTHVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 223

Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384
             I +     +  I + M    IY+ + ++++ F
Sbjct: 224 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 257



 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           +G ++  GRLS ++ V W+  + VE FR +P LV+IFF++ + L V P+P
Sbjct: 89  LGAVLAVGRLSVHRPVRWLSTLLVEFFRAMPVLVMIFFIFVA-LKVQPLP 137


>gi|269977205|ref|ZP_06184178.1| ABC-type amino acid transport system, permease component
           [Mobiluncus mulieris 28-1]
 gi|269934508|gb|EEZ91069.1| ABC-type amino acid transport system, permease component
           [Mobiluncus mulieris 28-1]
          Length = 302

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 50/76 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A++AEIVR+GL +V  GQ EAA ALG+      R ++LPQAMR I+PP  ++
Sbjct: 146 LGLGLNEGAYLAEIVRAGLNSVDPGQWEAATALGMKRSLIMRRIILPQAMRVIVPPTGNE 205

Query: 331 YLNLLKNSSLAVAVGF 346
            +++LK +SL  AV F
Sbjct: 206 TISMLKTTSLVSAVPF 221


>gi|241890035|ref|ZP_04777333.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Gemella haemolysans ATCC 10379]
 gi|241863657|gb|EER68041.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Gemella haemolysans ATCC 10379]
          Length = 214

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 57/91 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G+ ++P+GQ EAA  L  T  +  R V+LPQ ++ ++P + ++
Sbjct: 89  IAFTLNYAAYFAEIFRGGIESIPKGQYEAAKVLKFTQFQTIRYVILPQVIKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            ++L+K++SL  A+G +DL+    T  N+  
Sbjct: 149 IMSLVKDTSLVYALGISDLILASRTAANRDA 179


>gi|330428743|gb|AEC20077.1| amino-acid ABC transporter permease y4tF [Pusillimonas sp. T7-7]
          Length = 223

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 8/206 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V+S +LG   + FA  + +     T K++ + +I  F      T +L+ L + L+F 
Sbjct: 19  QLTVYSTILGAFFA-FAFGIGKLSSNWTAKSVSIFFIEIFR----GTSLLVQL-FWLYFA 72

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+LGQ   +G     P  ++  +ALS    A+ AE+VR  + AVP  Q EAA AL  T 
Sbjct: 73  LPLLGQA--VGIDLRLPPVVAGTLALSLNIGAYGAEVVRGAIQAVPPTQHEAAKALDFTP 130

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    + LPQA+  ++P   +  +  LK+++L   +   DL      I N T  ++ I 
Sbjct: 131 RQVLWRISLPQAIPEMMPSFGNLAVQNLKDTALVSLISLGDLAFRAEQIRNFTQDSVTIY 190

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
            + +F+Y  +++++   M  L   + 
Sbjct: 191 TLLLFMYFGMALVLTAIMKLLERSVG 216


>gi|315283401|ref|ZP_07871605.1| L-cystine transport system permease protein TcyM [Listeria marthii
           FSL S4-120]
 gi|313612950|gb|EFR86888.1| L-cystine transport system permease protein TcyM [Listeria marthii
           FSL S4-120]
          Length = 237

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 15/196 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F F++ I L+L      R +H +  + +   Y+S F     P ++ I L Y      P+
Sbjct: 33  LFGFIIAIGLTLI-----RMYHVRFLEPIAKFYVSFFR--STPAILHIMLIY---LGIPL 82

Query: 251 LGQF---NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  F   +F  G + +  P  + + IALS    A++ EI+RSG+IAV  GQMEAA ++G 
Sbjct: 83  IVDFLSKSFDLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSMGY 142

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +     +E
Sbjct: 143 THGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLE 202

Query: 366 IILIWMFIYLSLSIMI 381
             +    IY  L+++I
Sbjct: 203 AFIGAALIYWFLTMLI 218


>gi|301385505|ref|ZP_07233923.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
          Length = 232

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +PP +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPPYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|251789977|ref|YP_003004698.1| arginine transporter permease subunit ArtQ [Dickeya zeae Ech1591]
 gi|247538598|gb|ACT07219.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 238

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 2/183 (1%)

Query: 217 KALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           + LP + +  F+ FG   L+LI +  + L+     +     I    VSP F+   IALS 
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLILSDGFTLNLGLAQIPVKLAIDNFEVSP-FLCGVIALSL 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ ++ +R  L AVP+GQ E+  ALG++     R +++PQ  R  +P L +Q+L LL
Sbjct: 114 LYAAYASQTLRGALKAVPQGQWESGQALGMSKGVIFRRLIMPQMWRHALPGLGNQWLVLL 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+++L   +   DL+    +I  +T +     +I   IYL ++++    + R+  +    
Sbjct: 174 KDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLVITLLSQAILKRIETRATRF 233

Query: 396 EKK 398
           E++
Sbjct: 234 ERR 236


>gi|227487310|ref|ZP_03917626.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227092736|gb|EEI28048.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 312

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 58/88 (65%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F  +   L+ Y  + IAE +R+G++++P GQ EAA ALGL+HR+    +LLPQA+ +++P
Sbjct: 142 FAGVVFGLTMYNGSVIAETLRAGILSLPTGQSEAAEALGLSHRQTIWNILLPQAVATMLP 201

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            L SQ +  LK+++L   + + ++V  G
Sbjct: 202 ALISQLVIALKDTALGYMILYVEVVRSG 229



 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 42/72 (58%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+   +++ T IL G   T   A   +I A IIG L+G GRLS NK + W C + VE FR
Sbjct: 55  PFLKSTTWTTYILPGLWGTLKAALVSIILAIIIGALLGVGRLSKNKAIRWFCGIIVEFFR 114

Query: 138 NIPPLVVIFFLY 149
            IP L+++ F Y
Sbjct: 115 AIPVLILMIFAY 126


>gi|330954115|gb|EGH54375.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           Cit 7]
          Length = 246

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y + ++ EI+R
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSVYLCEIIR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|121604397|ref|YP_981726.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593366|gb|ABM36805.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 217

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P +++  +AL   ++AF+ EI R  + A+P GQ+EAA AL L++    R V+LPQ
Sbjct: 79  GFDINP-WIAAGVALILNSSAFLGEIWRGCIQAIPAGQVEAAHALSLSYFSRMRFVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A +  + P     + ++K +SLA  +GF ++   G  I N T Q + +  +   IY +L 
Sbjct: 138 AFKIALAPTVGYLVQIIKGTSLAAIIGFTEITRAGQIINNATFQPLIVFSVVAAIYFALC 197

Query: 379 IMIALFMNRLNAKIA 393
             ++L  +R+  + A
Sbjct: 198 WPLSLMASRMERRQA 212


>gi|150391392|ref|YP_001321441.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
 gi|149951254|gb|ABR49782.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
          Length = 227

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 14/157 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS +LG V  L AT L     +   KA+ + YIS  ++ G P L+      QL F    L
Sbjct: 36  FSILLGTVFGLLATMLKMTKIKPLMKAIDI-YIS--VVRGTPLLL------QLIFIFQAL 86

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +     G  +SP F+S  I L+ +  A+I+EI R  + ++  GQ EAA ALG+T  +A 
Sbjct: 87  PEI----GIKLSP-FISAVIGLAFHNGAYISEIFRGAIESIDYGQKEAASALGMTKWQAM 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + V LPQA +  +P L +Q++  +K+SSLA  +   +
Sbjct: 142 KRVTLPQAFKRSVPSLGNQFIIAIKDSSLASVITITE 178


>gi|320355177|ref|YP_004196516.1| PAAT family amino acid ABC transporter membrane protein
           [Desulfobulbus propionicus DSM 2032]
 gi|320123679|gb|ADW19225.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 262

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 70/121 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +  A+++EI+R+G+ ++   Q+E+A A+GL+  +  R V+LPQ +R I+PPL  Q
Sbjct: 137 LTLAFFAGAYLSEIIRAGIESIGESQIESARAIGLSPLQTYRFVILPQVVRRILPPLAGQ 196

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +L+K+SSL   +  ++       +   T   +E  L     YL L++ I+LF   L  
Sbjct: 197 FASLVKDSSLLSIIAVSEFTLNAQEVNAFTYSTLESYLPLAVGYLVLTLPISLFSRHLEQ 256

Query: 391 K 391
           K
Sbjct: 257 K 257


>gi|310830297|ref|YP_003965397.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753203|gb|ADO44346.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 222

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++SP   +L +AL     A+  EI+R+G+ +VP+GQ+EA  AL L   +  R V+L  
Sbjct: 83  GISMSPNTAAL-VALVINVGAYGTEIIRAGIESVPQGQVEAGRALALNKVQIFRYVILKP 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+I P LTSQ++ L+  SS+   +   DL + G  +  +T    EI L    IY  L+
Sbjct: 142 ALRNIYPSLTSQFIYLMLTSSVVSIISANDLAAAGADLSARTFANFEIYLALTIIYFLLA 201



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 31/54 (57%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  L+FS M+   I+  L    + S  +++ +I  +YVE  RN P L+ IFF+Y
Sbjct: 23  TVQLSFSAMVLGLIVSILGAVAKTSGGRVLRFIVDIYVEAIRNTPFLIQIFFIY 76


>gi|269102812|ref|ZP_06155509.1| arginine ABC transporter permease protein ArtQ [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162710|gb|EEZ41206.1| arginine ABC transporter permease protein ArtQ [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 242

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 38/218 (17%)

Query: 193 SFVLGIVLSLF--ATRLSRH---FHEKTG-----KALPLLYISTFLIFGLPTLVLIALKY 242
           S  +G+VL++   A  +SRH       TG     + LP + +  F+ FG           
Sbjct: 24  SLAVGLVLAVIFAAGEMSRHKLLAWTTTGWVTLLRGLPEILVVLFIFFG---------SS 74

Query: 243 QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           Q+ F         +I G    VSP F+S  IALS   +A+ ++ +R  L AV +GQ EAA
Sbjct: 75  QILF---------YITGDYIEVSP-FLSGVIALSLIFSAYASQTIRGALKAVSKGQREAA 124

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL+  +    ++LPQ +R  +P LT+Q+L LLK+++L   +G  DL+         T
Sbjct: 125 SALGLSSGRTFFKIILPQTVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQA----QLT 180

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             A      W     ++ ++I L   +L   I + EKK
Sbjct: 181 SAATHESFTWYATAAAIYLVITLLTQQL---IKVVEKK 215



 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 18/67 (26%), Positives = 38/67 (56%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y+ ++L     T  LAF+ +    ++  +  AG +S +KL+AW    +V + R +P +
Sbjct: 4   TGYSLSLLEASWMTIQLAFTSLAVGLVLAVIFAAGEMSRHKLLAWTTTGWVTLLRGLPEI 63

Query: 143 VVIFFLY 149
           +V+ F++
Sbjct: 64  LVVLFIF 70


>gi|239941505|ref|ZP_04693442.1| putative amino acid ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239987969|ref|ZP_04708633.1| putative amino acid ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291444949|ref|ZP_06584339.1| ectoine/hydroxyectoine ABC transporter [Streptomyces roseosporus
           NRRL 15998]
 gi|291347896|gb|EFE74800.1| ectoine/hydroxyectoine ABC transporter [Streptomyces roseosporus
           NRRL 15998]
          Length = 243

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 65/112 (58%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+VR  + +VPRGQ EAAIAL L+  +    V+LPQA   +IP  T+  + LLK 
Sbjct: 101 GAYGAEVVRGAINSVPRGQYEAAIALNLSPTRRLWKVILPQAWVQMIPSFTNLLIQLLKA 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + L   +  ADL++V   + ++TG+ +   L  + +Y  L+  + + MN L 
Sbjct: 161 TPLLWLLSAADLMTVVQQLRDRTGETVTAYLTLLAVYFVLAYALTMLMNLLE 212


>gi|167587239|ref|ZP_02379627.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 245

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 17/167 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG+ L + A  L+R +     + L L +I  F    +P L+LI   +  +F  P+L 
Sbjct: 40  SAVLGVALGV-AMALARGW----ARVLLLAFIGFFR--AIPVLMLI---FWTYFLMPMLL 89

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             +  G +TV         AL+    A++A  V +G++A   GQ +A ++LGLT  +  R
Sbjct: 90  HTDVPGLATV-------VCALALIGGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVR 142

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 143 YVLLPQAIRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|219670587|ref|YP_002461022.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219540847|gb|ACL22586.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 221

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 24/177 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L                       G T+S E     + LS    +
Sbjct: 66  PLLIQVYFLYFGLPKL-----------------------GVTLS-ETACAILGLSFLGGS 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R G+ AV + Q+E+ ++LGL+  +  R V+ PQA    IP L +  + LLK +S
Sbjct: 102 YMAEALRGGMEAVSKSQIESGLSLGLSRWQLIRYVVFPQAFSFSIPALGANCIFLLKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  A+   DL++V   +I    Q +E +L+ +  YL + + ++LF+  L  K+   E
Sbjct: 162 VLGAIAILDLMNVTKDLIGMYYQTVESLLMLVVSYLIILLPLSLFLTWLERKVRYAE 218


>gi|119383469|ref|YP_914525.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373236|gb|ABL68829.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 215

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 70/131 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  + +    +A+I+EI R  + A+PRGQ EAA+A+G+T R     V+LPQA    
Sbjct: 85  PAIFAAVVTVGICASAYISEIWRGAIAALPRGQAEAAVAIGMTPRDTWTRVILPQAFTMS 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++ + L+K SSL   VG  +L          T + +E+ L    IYL++++ +A 
Sbjct: 145 LPALVNELILLVKASSLVSVVGILELTRASQAQAATTFRPLEVYLAAACIYLAINLCLAA 204

Query: 384 FMNRLNAKIAL 394
               L  + A+
Sbjct: 205 LGRYLEHRTAV 215


>gi|299483523|gb|ADJ19604.1| putative ABC-type amino acid transporter [Treponema primitia ZAS-2]
          Length = 189

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 54/77 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS    AF++E +R+ L++V  GQ EAA +LG+T+ +  R ++LPQA+R  +PPL + 
Sbjct: 96  VVLSLNVGAFMSESIRAALMSVDEGQKEAAYSLGMTNLQLMRRIILPQAVRVALPPLFND 155

Query: 331 YLNLLKNSSLAVAVGFA 347
            +NL+K+SSLA  +G A
Sbjct: 156 MINLIKSSSLAFMLGVA 172


>gi|119961590|ref|YP_946400.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119948449|gb|ABM07360.1| putative amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opine family [Arthrobacter aurescens
           TC1]
          Length = 262

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 95/181 (52%), Gaps = 17/181 (9%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSL-YIALSCYTAAFI 281
           I T L  GLP ++ I L          +GQ F  +  S   P    L  IALS   +A+I
Sbjct: 67  IYTDLFRGLPAILTILL----------IGQGFARLSQSVFGPSPYPLGIIALSLIASAYI 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI R+G+ +V +GQ EA  ALG+++ K+  LV++PQ +R ++P L +Q++ ++K+SSL 
Sbjct: 117 GEIFRAGIQSVDKGQGEACRALGMSYSKSMALVVVPQGIRRVLPALVNQFIAIVKDSSLV 176

Query: 342 VAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G      +L  VG      +G    +++  +F YL +++ +   +N  + K     +
Sbjct: 177 YFLGLLVSERELFRVGQDAAVLSGNLSPLVMAGIF-YLIITVPLTHLVNYFDNKFRTGRR 235

Query: 398 K 398
           +
Sbjct: 236 R 236


>gi|313904157|ref|ZP_07837536.1| polar amino acid ABC transporter, inner membrane subunit
           [Eubacterium cellulosolvens 6]
 gi|313470959|gb|EFR66282.1| polar amino acid ABC transporter, inner membrane subunit
           [Eubacterium cellulosolvens 6]
          Length = 238

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 100/196 (51%), Gaps = 21/196 (10%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYI 224
           NNR L +    + ++  I + +  LG+VL +    +  +  ++ G A         + ++
Sbjct: 19  NNRWLLYLK-GLGSSLVITLGALALGVVLGILVAVVRTNHDQRKGHASLGLKIINGICHV 77

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T +I G P +V + +               F+  S+ +  +M   ++L   + A+++EI
Sbjct: 78  YTTVIRGTPMMVQLLI-------------MGFVIFSSSTHYYMIAILSLGINSGAYVSEI 124

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G++++  GQMEA  +LG+ +    + +++PQA+++I+P L ++ + L K++SL   +
Sbjct: 125 IRGGIMSIDPGQMEAGRSLGMGYATVMKDIIIPQAIKNILPALGNELITLFKDTSLVSVI 184

Query: 345 GFADLVSVGGTIINQT 360
           G  +L  V   I  +T
Sbjct: 185 GMTELTKVARDIQART 200


>gi|238024848|ref|YP_002909080.1| ABC-type amino acid transport system, permease [Burkholderia glumae
           BGR1]
 gi|237879513|gb|ACR31845.1| ABC-type amino acid transport system, permease component
           [Burkholderia glumae BGR1]
          Length = 216

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 70/128 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  + L+ +T+A++AEI R  + AVPRGQ EA+ +L +++ +  R V+LPQA R  
Sbjct: 84  PPWLAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQAARIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + P     +  +K+++L   +GF +L   G  I N T +   +  +   IY +L   +  
Sbjct: 144 VGPTVGFGVQAIKDTALVSIIGFTELTKAGTMISNATFRPFLVYGLVALIYFALCYPLTR 203

Query: 384 FMNRLNAK 391
           +   L  K
Sbjct: 204 WARSLQRK 211


>gi|254250640|ref|ZP_04943959.1| ABC transporter, permease protein [Burkholderia cenocepacia PC184]
 gi|124879774|gb|EAY67130.1| ABC transporter, permease protein [Burkholderia cenocepacia PC184]
          Length = 237

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 18/206 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +A   V  F +G+V+     RL+ H   +T       Y+  F   G+P LV + L
Sbjct: 41  MTLEVSAAGLVLGFCIGLVVC--CGRLAPHVAIRTAAGA---YVRVFR--GVPLLVQLLL 93

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             F+G +   P  M+   A+S  +AA+IAEI+R G   +P+GQ+EAA
Sbjct: 94  VYYF---------LPFVGLNV--PPVMAAVSAVSLCSAAYIAEILRGGFANLPKGQLEAA 142

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LG +       + +PQA+R  +P L ++ + L+K SSL   VG A++      I   T
Sbjct: 143 TMLGFSATDRLWRIQVPQAVRMTLPSLVNEMVLLIKASSLVSVVGVAEITRTAQNIAAST 202

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMN 386
            Q +E  +    IY  L   +AL  +
Sbjct: 203 YQPLEAYVAAGMIYFLLCGSLALIAH 228


>gi|89895379|ref|YP_518866.1| hypothetical protein DSY2633 [Desulfitobacterium hafniense Y51]
 gi|89334827|dbj|BAE84422.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 262

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 28/217 (12%)

Query: 180 TLTMDT----NAKIFVFSFVLGIVLSLFATRLS---RHFHEKTGKA--LPLLYISTF--- 227
           TL +DT     AK F+  F++ I+++ F+  LS     F    GK+  LPL Y S     
Sbjct: 46  TLRLDTVYLYRAK-FIDGFLMTIIIAFFSLILSLIIGSFLAFAGKSRFLPLHYFSKAYVE 104

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIV 285
           +I G P LV I +             F +I  +   +S  ++   I LS ++ A+I EI+
Sbjct: 105 IIRGTPLLVQIYV-------------FFYIIATAMHLSNRYVLGVIILSVFSGAYICEII 151

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++   Q+E A +LG T  +  R +++PQ  + I+PPL  Q ++L+K+SSL   + 
Sbjct: 152 RAGIESIEASQIETARSLGFTSYQRYRYIIIPQVFKRILPPLAGQLVSLIKDSSLLSVIA 211

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            ++L      + + T    E  ++   +Y+ L++ I+
Sbjct: 212 VSELTKNVQEVDSFTFATFENYIVLALLYMILTVPIS 248


>gi|297570733|ref|YP_003696507.1| polar amino acid ABC transporter inner membrane protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931080|gb|ADH91888.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 323

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 53/79 (67%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   + L     A++AEIVRSGL +V  GQ EAA ALG+++    R ++LPQAMR I+P
Sbjct: 154 FLFAVLGLGLNEGAYLAEIVRSGLNSVDPGQEEAAKALGMSNGMILRRIVLPQAMRVIVP 213

Query: 326 PLTSQYLNLLKNSSLAVAV 344
           P  ++ +++LK +SL  AV
Sbjct: 214 PTGNETISMLKTTSLVTAV 232


>gi|293376247|ref|ZP_06622490.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|325845168|ref|ZP_08168477.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|292645139|gb|EFF63206.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|325488833|gb|EGC91233.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 253

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 92/170 (54%), Gaps = 20/170 (11%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V     Y  H  +P+LG  +   G  +          +S  T A++AEI+RSG+ 
Sbjct: 86  GTPMMVQAMFLY--HALRPILGWSSLTAGIVI----------ISVNTGAYMAEIIRSGIQ 133

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQ+EAA ++G+T  ++   ++LPQA+++  P + ++++  +K+SS+   +G  ++ 
Sbjct: 134 SVDKGQLEAARSIGMTAFQSMMYIILPQAIKNAFPSIGNEFIVNIKDSSMLNVIGVIEVF 193

Query: 351 ----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               SV G+++  +    E   I   IYL L+ + A  +  +  K+ +K+
Sbjct: 194 FQSKSVAGSVMLYS----ETFFITCLIYLVLTTITAQILGWIEKKMNVKK 239


>gi|134278113|ref|ZP_01764827.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           pseudomallei 305]
 gi|134249897|gb|EBA49977.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           pseudomallei 305]
          Length = 255

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 76/128 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A++    A+  EIVR+G+ ++PRGQ++AA+ALGL  R+  R V+LPQA+ ++ 
Sbjct: 89  EMQAAVLAMTVNLGAYALEIVRAGIDSIPRGQIQAAMALGLQGRQVFRYVVLPQALANVF 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L  Q L ++  S++   +   DL      I ++  ++ E  +I   IYL LSI++ L 
Sbjct: 149 PALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITAIYLLLSIVLRLL 208

Query: 385 MNRLNAKI 392
           +NRL   +
Sbjct: 209 INRLGKDL 216


>gi|239834901|ref|ZP_04683229.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822964|gb|EEQ94533.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 595

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F + ++ L+   +AF AEIVR G+++V +GQ EAA ALGL   +    ++LPQAMRSI+P
Sbjct: 166 FAAAFLGLTLNQSAFFAEIVRGGILSVDQGQHEAAAALGLPRTRQALRIVLPQAMRSILP 225

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              ++ + L K +S+   +   +L      I  +  + I +++   +W  + +++  +  
Sbjct: 226 TGFNEIIGLAKGTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLVIMTVLSVAQ 285

Query: 383 LFMNRLNAKIALK 395
            ++ R  AK A++
Sbjct: 286 YYIERYFAKGAVR 298


>gi|209549650|ref|YP_002281567.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209535406|gb|ACI55341.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 268

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 98/191 (51%), Gaps = 18/191 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L +     + + +  +G+ +  F   L +   EK+ +    +Y + F   GLP L+ +  
Sbjct: 51  LGLQVTVSVAIVTLPIGLAIG-FLVALGQQSEEKSLRLAAGIYTTIFR--GLPELLTL-- 105

Query: 241 KYQLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            + +++   +L Q    F+G      E   F++  IALS   +A+ +E++ S   A+P+G
Sbjct: 106 -FIIYYGMQMLIQSLLTFVGYDGPPVEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKG 164

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  +LGL H +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD       
Sbjct: 165 QYEAGDSLGLHHGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLAD------- 217

Query: 356 IINQTGQAIEI 366
           I+ QT  A+ +
Sbjct: 218 ILRQTSVAVRV 228


>gi|14601702|ref|NP_148243.1| ABC transporter, permease protein [Aeropyrum pernix K1]
 gi|5105584|dbj|BAA80897.1| ABC transporter, permease protein [Aeropyrum pernix K1]
          Length = 220

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 14/177 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + S  +G  +SL  T  +R    K  +     YI+ F   G P LV I + +   F  
Sbjct: 22  ITIISLSMGFTISLILTA-ARFLGFKPLRMAAEAYINFFR--GTPLLVQILMVF---FGL 75

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P LG  N          F S  IA+   + A+ AEI+R  +  +P  QM  A +LGL+  
Sbjct: 76  PSLG-VNL-------SAFYSAVIAIGLNSGAYQAEILRVAIKGIPEEQMLVARSLGLSEI 127

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  + V++PQA+R+ IP LT++ + LLK SSLA  +G  +L  VG  +++ T +A+E
Sbjct: 128 EIMKGVVIPQAVRNAIPGLTNETVILLKESSLASVIGVMELTRVGEYMVSATFRALE 184


>gi|325663781|ref|ZP_08152182.1| hypothetical protein HMPREF0490_02923 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331087298|ref|ZP_08336367.1| hypothetical protein HMPREF0987_02670 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325470114|gb|EGC73348.1| hypothetical protein HMPREF0490_02923 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330408389|gb|EGG87860.1| hypothetical protein HMPREF0987_02670 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 239

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 94/174 (54%), Gaps = 24/174 (13%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY---TA 278
           +YI+  +I G P +V + + Y L F                S +  +L +   C+   + 
Sbjct: 77  IYIT--IIRGTPVMVQLLIIYNLIF---------------TSRDTNALLVGAVCFGINSG 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI+R+G+ ++ +GQMEA  +LGL + +  + +++PQA+++I+P L ++++ L+K +
Sbjct: 120 AYVAEIIRAGIESIDKGQMEAGRSLGLNYLQTMKEIIIPQAIKNILPALGNEFIVLIKET 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMIALFMNRL 388
           S+A  +   DL      I + T   +  + +    ++ I L L+ ++ LF  R+
Sbjct: 180 SVAGVIAVTDLTKAAQYIGSATYDILPPLYVAAVCYLVIVLGLTKLLNLFERRM 233


>gi|221370065|ref|YP_002521161.1| Polar amino acid ABC transporter, inner membrane subunit precursor
           [Rhodobacter sphaeroides KD131]
 gi|221163117|gb|ACM04088.1| Polar amino acid ABC transporter, inner membrane subunit precursor
           [Rhodobacter sphaeroides KD131]
          Length = 370

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + + ++ + A + AE++R GL A+P GQ EAA +L L++ + TR ++LPQA+R  +
Sbjct: 235 KLLRITVGIAIFFACYQAEVIRGGLQAIPTGQYEAAASLSLSYWQTTRRIILPQALRISL 294

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMI 381
           P +T+  +  +KN+S  + +G  D+++    ++         IE  L    +YL     +
Sbjct: 295 PAITNHIIAAMKNTSFVIIIGLFDILTATTAVMQDPLWRKFYIEAYLFVAAVYLFFGYAL 354

Query: 382 ALFMNRLNAKIA 393
           +L+  ++   IA
Sbjct: 355 SLYARQVEKWIA 366


>gi|89092422|ref|ZP_01165376.1| general amino acid ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
 gi|89083510|gb|EAR62728.1| general amino acid ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
          Length = 366

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 84/145 (57%), Gaps = 11/145 (7%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F  G+ V  + + ++I L+ + A ++AE+ R G  AVP GQ EAA +LGL++ + T L++
Sbjct: 221 FPEGTNVD-KLVRVWIVLTLFMAGYMAEVFRGGFQAVPTGQYEAADSLGLSYWQKTLLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQAIEIILIWM 371
           LPQ ++  +P + + ++ L KN++  + +G  +++S   T +  +    G + E      
Sbjct: 280 LPQVIKVSMPNILATFVMLFKNTTFLLIIGIFEVLSTTQTALTNSNWLGGHSTE-----G 334

Query: 372 FIYLSLSIMIALF-MNRLNAKIALK 395
           ++++++   I  + M+R++A I  K
Sbjct: 335 YLFVAIVFWICCYSMSRISASIERK 359


>gi|15925403|ref|NP_372937.1| ABC transporter (permease protein) [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927991|ref|NP_375524.1| hypothetical protein SA2201 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21284064|ref|NP_647152.1| hypothetical protein MW2335 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|156980728|ref|YP_001442987.1| hypothetical protein SAHV_2397 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|262048821|ref|ZP_06021702.1| hypothetical protein SAD30_0668 [Staphylococcus aureus D30]
 gi|262051565|ref|ZP_06023786.1| hypothetical protein SA930_1333 [Staphylococcus aureus 930918-3]
 gi|13702362|dbj|BAB43503.1| SA2201 [Staphylococcus aureus subsp. aureus N315]
 gi|14248187|dbj|BAB58575.1| ABC transporter (permease protein) [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|21205507|dbj|BAB96200.1| MW2335 [Staphylococcus aureus subsp. aureus MW2]
 gi|156722863|dbj|BAF79280.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|259160549|gb|EEW45572.1| hypothetical protein SA930_1333 [Staphylococcus aureus 930918-3]
 gi|259163079|gb|EEW47640.1| hypothetical protein SAD30_0668 [Staphylococcus aureus D30]
 gi|285818074|gb|ADC38561.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           04-02981]
          Length = 164

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 52/70 (74%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+ +  + ++LPQA+R  IP L + 
Sbjct: 37  IGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNT 96

Query: 331 YLNLLKNSSL 340
           +L+L+K++SL
Sbjct: 97  FLSLIKDTSL 106


>gi|312961852|ref|ZP_07776350.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311284111|gb|EFQ62694.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 233

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 10/177 (5%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI  +P LVLI     +L+  L+      G   F     + P F +  I L     A+
Sbjct: 58  TTLIRSVPDLVLILLIFYSLQLWLNDLTETFGWDYF----EIDP-FTAGVITLGFIYGAY 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R  +++VP GQ+EAA A GL+  +  RLVL PQ MR  +P L + +L LLK+++L
Sbjct: 113 FTENFRGAILSVPVGQLEAATAYGLSRWQRFRLVLFPQLMRFALPGLGNNWLVLLKSTAL 172

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +G +DLV         T + +  +++   +YL ++ +      RL  +  L  K
Sbjct: 173 VSIIGLSDLVKAAQNAGKTTSEPLYFLILAGLVYLVITTLSNRIFKRLERRYNLGIK 229


>gi|269138890|ref|YP_003295591.1| amino-acid ABC transporter permease component [Edwardsiella tarda
           EIB202]
 gi|267984551|gb|ACY84380.1| amino-acid ABC transporter permease component [Edwardsiella tarda
           EIB202]
 gi|304558876|gb|ADM41540.1| amino-acid ABC transporter permease component [Edwardsiella tarda
           FL6-60]
          Length = 233

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 71/124 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EIVR  +++VPRGQ EAA A+G++  +A R V+LPQ++   +P
Sbjct: 103 FPAALIGFTLNVGAYSSEIVRGAILSVPRGQWEAASAIGMSSAQAMRRVILPQSVFVSLP 162

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA  +   ++      I+    + + I      IYL+ S ++    
Sbjct: 163 PLSNAFISLIKDTSLAAVITVPEMFLAAQRIVAVNYEPLIIYSETALIYLAFSTLLGKLQ 222

Query: 386 NRLN 389
            RL 
Sbjct: 223 LRLE 226


>gi|254393591|ref|ZP_05008723.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294812810|ref|ZP_06771453.1| Putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326441240|ref|ZP_08215974.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197707210|gb|EDY53022.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294325409|gb|EFG07052.1| Putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 249

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +E+VR  L AVP GQ EAA+ALG    + T  VLLPQA   +I PL + 
Sbjct: 91  LALGLTYGAYGSEVVRGALAAVPAGQREAALALGFGPARTTARVLLPQAWPEMIRPLNNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K ++L   +G +DL      + N TGQ+  +  + +  Y  L+ ++   M  L  
Sbjct: 151 LVELVKGTALVSVMGVSDLAFGAALVRNATGQSAPVYTVILVAYFLLAFVLTRGMRALER 210

Query: 391 K 391
           +
Sbjct: 211 R 211


>gi|170697555|ref|ZP_02888645.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170137578|gb|EDT05816.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 603

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 7/148 (4%)

Query: 256 FIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           F+ G T   ++P FM+  + L+   AAF AE +R G+++V  GQ EAA ALGL   + T 
Sbjct: 156 FLRGPTTDLITP-FMAAILGLTLTQAAFAAEAIRGGILSVEHGQREAAAALGLPRARQTW 214

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---I 369
            ++LPQAMR+I+P   +  + L K +++   +   DL      I ++  + I +++   +
Sbjct: 215 RIVLPQAMRAILPAAFNDVIGLAKGTAVVYILAMPDLFYTVQIIYHRNLEVIPMLMVATV 274

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
           W  + L++   I + + R  A+ A +++
Sbjct: 275 WYLVILTVLSAIQVHIERHYARGATRDQ 302


>gi|78061685|ref|YP_371593.1| amino acid ABC transporter inner membrane protein [Burkholderia sp.
           383]
 gi|77969570|gb|ABB10949.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia sp. 383]
          Length = 219

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S  LG+V+ L    + R    +   +L   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMALGLVVGLVIA-IMRIGSNRLAASLAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P LG        T+ P    ++  L+    A+++E +R  ++ + RGQ  AA +LGLTH
Sbjct: 77  LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRYVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    IY  LS ++     R+  ++AL
Sbjct: 189 LAAAAIYWVLSTLLTRLQGRVETRLAL 215


>gi|257868424|ref|ZP_05648077.1| ABC-type amino acid transporter [Enterococcus gallinarum EG2]
 gi|257802588|gb|EEV31410.1| ABC-type amino acid transporter [Enterococcus gallinarum EG2]
          Length = 250

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV +   Y +++  P L Q   I  S+ + + + +YI     TAAF +E  R+ 
Sbjct: 64  IRGTPILVQL---YVVYYGVPALLQMIQIDVSSWN-KIIFIYITYGLNTAAFQSETFRAA 119

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +++VP  Q EA+IA GLT  +  R V+LPQ +R  +P   +  + LL+++SLA  +G  D
Sbjct: 120 ILSVPVTQKEASIACGLTKTQMYRQVILPQVVRVALPAFGTTTIALLQDTSLAFTIGVVD 179

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +V     I   T   +E  +    ++++LS ++      L  +++  + K
Sbjct: 180 VVGKARAIGAVTFHTLEGYVGAAILFITLSFLLERVFTGLERRMSFSKTK 229


>gi|225868397|ref|YP_002744345.1| transport system membrane protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701673|emb|CAW98991.1| transport system membrane protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 217

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 71/125 (56%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           Y+  S  +AA+I+E+ R+ + A+ +GQ EAA ALGL +    + V+LPQA R  IPPL +
Sbjct: 91  YLGFSLVSAAYISEVFRASIDAIDQGQWEAARALGLPYISIVKHVILPQAFRIAIPPLGN 150

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++    + L 
Sbjct: 151 VVIDMVKSSSLAAMITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQSFLE 210

Query: 390 AKIAL 394
            ++ L
Sbjct: 211 KRLRL 215


>gi|330961754|gb|EGH62014.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 277

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 76/123 (61%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+  IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP
Sbjct: 144 MAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPP 203

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            T+Q++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +
Sbjct: 204 TTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQS 263

Query: 387 RLN 389
           RL 
Sbjct: 264 RLE 266


>gi|325062210|gb|ADY65900.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 217

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 68/128 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + LS YTAA+  EIVR G+ AVP     A  +LG+T  +  R ++LP A R  
Sbjct: 85  PPFTTSCVVLSLYTAAYCTEIVRGGIEAVPSNTRRACRSLGMTWSQDMRYIVLPLATRVS 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P      L ++K+S+L + +G  +L+     ++ +  + + I++I   IY  +S  IA 
Sbjct: 145 LPAWIGLTLGVMKDSALVLWLGLIELLRASQILVTRLQEPLTILMICGAIYFLISFPIAR 204

Query: 384 FMNRLNAK 391
           F   L  +
Sbjct: 205 FGGYLERR 212


>gi|197303849|ref|ZP_03168885.1| hypothetical protein RUMLAC_02588 [Ruminococcus lactaris ATCC
           29176]
 gi|197297142|gb|EDY31706.1| hypothetical protein RUMLAC_02588 [Ruminococcus lactaris ATCC
           29176]
          Length = 236

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 76/122 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+RSG+ +V  GQMEA  A+GL+   +   +++PQA+++I+P L +++++L+K
Sbjct: 114 SGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMTKIVIPQAVKNILPTLGNEFISLVK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG ADL      I + + + +   L+   IY++L ++I L +  L   +   +
Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIALVLIITLLVKILERSLKKSD 233

Query: 397 KK 398
           ++
Sbjct: 234 RR 235



 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 6/110 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL-----SANKLV 125
           ++D+ I  +   + Y   +L G  NT  +A  G+I   +IGTL+   R+     +  K++
Sbjct: 7   KVDKFIEIFLDQNGY-VKVLQGLQNTLMIAICGLIIGIVIGTLIATVRVIPKYKTLPKVL 65

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
             IC  YV +FR  P +V +   Y  +L ++ +    + +   +F  N G
Sbjct: 66  NHICSFYVALFRGTPMVVQLLVFYYVLLPIIGVKITGVQVAMVVFGLNSG 115


>gi|148828331|ref|YP_001293084.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittGG]
 gi|148719573|gb|ABR00701.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittGG]
          Length = 221

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 13/209 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFDK 248
           V S +LG+ LSL  + L  +     GK + +  +   L+ GLP ++++ L Y       +
Sbjct: 21  VCSLILGLFLSLIFSALEAN--RFVGKPMTVFVV---LLRGLPEIIVVLLVYFGSTELVE 75

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            + G++   G       F    +ALS   AA+ ++ +R  + A+P+GQ E+  ALGL+  
Sbjct: 76  MLTGEYIEFGA------FGCGVLALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKS 129

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
                +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q      
Sbjct: 130 YTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWYG 189

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I   IYL+++++  + + +L  +    E+
Sbjct: 190 IAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|15890313|ref|NP_355985.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158516|gb|AAK88770.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 217

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 68/128 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + LS YTAA+  EIVR G+ AVP     A  +LG+T  +  R ++LP A R  
Sbjct: 85  PPFTTSCVVLSLYTAAYCTEIVRGGIGAVPSNTRRACRSLGMTWSQDMRYIVLPLATRVS 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P      L ++K+S+L + +G  +L+     ++ +  + + I++I   IY  +S  IA 
Sbjct: 145 LPSWIGLTLGVMKDSALVLWLGLIELLRASQILVTRLQEPLTILMICGAIYFLISFPIAR 204

Query: 384 FMNRLNAK 391
           F   L  +
Sbjct: 205 FGGYLERR 212


>gi|317403730|gb|EFV84215.1| amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 230

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 8/121 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I   Y +++  P+L     + G+    E +   +A++ + AA+++EI+R G+ +V
Sbjct: 71  PLLVQI---YLVYYAVPML-----VPGAKGWSEMLLGILAMTLHHAAYMSEIIRVGIESV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ+E A A G+ + +  R V+LPQA  + +PPL  Q   L+K++SL   +   +LV+ 
Sbjct: 123 PRGQIEGAKACGMNYHQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSLITVFELVAA 182

Query: 353 G 353
           G
Sbjct: 183 G 183


>gi|315640932|ref|ZP_07896028.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483350|gb|EFU73850.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 269

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 4/137 (2%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV +   Y +++  P L +   I  S+ +  F  +YI     TAAF +E +R+ 
Sbjct: 81  IRGTPILVQL---YVVYYGVPTLLEAVNIDVSSWNKIFF-IYITYGLNTAAFQSETIRAA 136

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +++VP  Q EAAIA GLT  ++ R V+LPQ +R  +P   +  + LL+++SLA  +G  D
Sbjct: 137 ILSVPATQKEAAIACGLTRVQSYRKVILPQMVRVALPSFGTTTVALLQDTSLAFTIGVID 196

Query: 349 LVSVGGTIINQTGQAIE 365
           +V     I   T   +E
Sbjct: 197 VVGKAKAIGAVTFHTLE 213


>gi|293602767|ref|ZP_06685207.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
 gi|292818783|gb|EFF77824.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
          Length = 218

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 69/129 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++   AL+ ++ AF+AEI R  + A+P+GQ EA+ +L L + +  R V+LPQA+R  
Sbjct: 84  PPWLAAGAALTLWSGAFLAEIWRGCVEAIPKGQWEASASLALGYVQQMRYVVLPQALRIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           I P     + ++K+++L   +GF +L      I N T     +      IY +L   ++ 
Sbjct: 144 IAPTVGFAVQIVKSTALTSIIGFTELSKASTVITNATFSPFTVYACAALIYFALCWPLSR 203

Query: 384 FMNRLNAKI 392
              RL  K+
Sbjct: 204 LSLRLERKL 212


>gi|293606209|ref|ZP_06688572.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815356|gb|EFF74474.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 217

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 75/132 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +   + L+    A+ AE+VR  + AVP GQ EA +AL LT  +  R +++PQA+ ++
Sbjct: 86  PAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALNLTRAQIMRRIVVPQAVPAM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP  +  + L+KN++L   +   DL   G  + ++T +  EI  + + +Y +++++I  
Sbjct: 146 LPPAGNLLIELMKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLMLLMYFAVALVITA 205

Query: 384 FMNRLNAKIALK 395
            +  L  ++ ++
Sbjct: 206 GVRALERRVRVR 217



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G GRLS  + + W+  VYVEVFR    LV +F+ Y
Sbjct: 41  GIGRLSPLRPLRWLSSVYVEVFRGTSALVQLFWFY 75


>gi|111021335|ref|YP_704307.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110820865|gb|ABG96149.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 243

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AE+VR  + +VP+ Q EAA AL  +H +  R V+ PQA   +IPPLT+ 
Sbjct: 93  LALGLNYGAYGAEVVRGAINSVPQSQWEAATALDFSHWQRLRRVVFPQAWAEMIPPLTNL 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++LA  +   DL      +   TG  +    + + IY  +  ++ L MN L  
Sbjct: 153 LIQLLKGTALASYILLQDLTFEIDQLRQTTGNTLFAFGVGLVIYFVIGYVLTLVMNALEV 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|104781754|ref|YP_608252.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95110741|emb|CAK15454.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 239

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 25/209 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250
           LG+V++L A         ++ K LP  + +TF  +  GLP   TL++I    Q+   K +
Sbjct: 40  LGLVVALAA---------RSRKRLPRAWATTFSTVFRGLPELLTLLIIYYGCQIAAQK-I 89

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L    + G   ++  F++  IA S   AAF +EI       +P+GQ+EA  ALGL  R  
Sbjct: 90  LAALGYPGEVLIN-TFLAAMIAFSLVFAAFSSEIWLMAFKTLPKGQLEACSALGLGRRTG 148

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V+LPQ  R  +P L++ +L+LLK++SL   +   DL       + QT  A+ +    
Sbjct: 149 FFKVVLPQLARIALPGLSNNWLSLLKDTSLVSTISLIDL-------MRQTNLAVSVTKEP 201

Query: 371 MFIYLSLSIMIALFMNRLNAKI-ALKEKK 398
           MF Y  ++ ++ L  + L+ ++ AL E++
Sbjct: 202 MFFY-GVACLVYLLFSALSGRVFALLERR 229


>gi|227818836|ref|YP_002822807.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|36959094|gb|AAQ87519.1| Transporter [Sinorhizobium fredii NGR234]
 gi|227337835|gb|ACP22054.1| probable amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 222

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+  EI+R G+ +V RGQ+EA  ALGL      RL++L  A+R+I P LTSQ
Sbjct: 95  LALGINGGAYAIEIIRGGVESVSRGQIEAGFALGLHKADVFRLIVLKPALRAIYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           ++ L   +S+  ++   +L S    I + T ++ E+      IYL +S +M+ LF
Sbjct: 155 FIMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFTVTAIYLVISTLMMGLF 209


>gi|257066001|ref|YP_003152257.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
 gi|256797881|gb|ACV28536.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
          Length = 490

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 71/118 (60%), Gaps = 4/118 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ +  ++A++AE+ R G+ +V +G+ EAA +LGL++ +  + V++PQA+++ +P L ++
Sbjct: 366 ISFALNSSAYMAELFRGGINSVSKGEKEAARSLGLSNLQMMKKVVMPQAVKNSLPALGNE 425

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            + L K +S+A  +G ADL      +I+QT  A         IYL    +I L M ++
Sbjct: 426 VITLFKETSIAGFIGLADLTRGASIVISQTFDAATAYFSAAIIYL----VIVLVMEKI 479


>gi|195978272|ref|YP_002123516.1| probable amino-acid ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195974977|gb|ACG62503.1| probable amino-acid ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 217

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 70/125 (56%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           Y+  S  +AA+I+E+ R+ + A+ +GQ EAA ALGL +    + V+LPQA R  IPPL +
Sbjct: 91  YLGFSLVSAAYISEVFRASIDAIDQGQWEAARALGLPYVSIVKHVILPQAFRIAIPPLGN 150

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++      L 
Sbjct: 151 VVIDMVKSSSLAAMITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQGFLE 210

Query: 390 AKIAL 394
            ++ L
Sbjct: 211 KRLRL 215


>gi|194288894|ref|YP_002004801.1| amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424]
 gi|193222729|emb|CAQ68732.1| putative amino acid ABC transporter, membrane component
           [Cupriavidus taiwanensis LMG 19424]
          Length = 219

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 18/208 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            VF  +LG V++L         H +  KA+   Y+S  ++ G P LV I   + +++  P
Sbjct: 29  MVFGLMLGTVVALMGIS-----HSRVLKAVARGYVS--IMRGTPLLVQI---FVVYYGLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G         + P    + + LS    A+++E +R  ++ V RGQ  AA +LGLT  +
Sbjct: 79  GIG-------IALEPTPAGV-LTLSLNVGAYLSESMRGAILGVARGQWLAAYSLGLTPAQ 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T Q + + L 
Sbjct: 131 ALRYVIGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLA 190

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              IY  LS  ++   ++L  +++L  +
Sbjct: 191 VAAIYWVLSTALSGLQHKLERRLSLPGR 218


>gi|209552105|ref|YP_002284021.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539698|gb|ACI59629.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 81/148 (54%), Gaps = 12/148 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G+P L+L+   + + F  PV      + G  +S  F S  +AL+ +  A   E  R+
Sbjct: 62  LIRGVPVLILL---FWIFFCLPV------VTGLEIS-NFFSSTLALTLFMGAATCESFRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLP-QAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            L ++P  Q +A  ALGLT++     V++P  AMR+I P L S  + L K SSLA AVG 
Sbjct: 112 ALKSIPHEQYDACTALGLTNKSRLLDVVVPLMAMRAI-PNLLSNTVALFKESSLASAVGT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIY 374
            +L+ +G  I N T + IE++ +   +Y
Sbjct: 171 VELMYIGQNIANSTARPIEVLTVVGILY 198


>gi|89093224|ref|ZP_01166174.1| general amino acid ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
 gi|89082520|gb|EAR61742.1| general amino acid ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
          Length = 366

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 84/145 (57%), Gaps = 11/145 (7%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F  G+ V  + + ++I L+ + A ++AE+ R G  AVP GQ EAA +LGL++ + T L++
Sbjct: 221 FPEGTNVD-KLVRVWIVLTLFMAGYMAEVFRGGFQAVPTGQYEAADSLGLSYWQKTLLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQAIEIILIWM 371
           LPQ ++  +P + + ++ L KN++  + +G  +++S   T +  +    G + E      
Sbjct: 280 LPQVIKVSMPNILATFVMLFKNTTFLLIIGIFEVLSTTQTALTNSNWLGGHSTE-----G 334

Query: 372 FIYLSLSIMIALF-MNRLNAKIALK 395
           ++++++   I  + M+R++A I  K
Sbjct: 335 YLFVAIVFWICCYSMSRISASIERK 359


>gi|227327468|ref|ZP_03831492.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 221

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 65/107 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ Y+AA+  EI R+GL ++  GQ E A ALG+ H    R V+LPQ +R+++P LT++
Sbjct: 96  LALTLYSAAYCTEIFRAGLQSIDHGQWEGAKALGMRHSVILRRVVLPQVLRNMLPALTNR 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            + L K +SLA  +   +L+  G  + +   + +EI+ +   +Y  L
Sbjct: 156 MIELAKVTSLASILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVL 202


>gi|254245480|ref|ZP_04938801.1| Glutamine ABC transporter [Burkholderia cenocepacia PC184]
 gi|124870256|gb|EAY61972.1| Glutamine ABC transporter [Burkholderia cenocepacia PC184]
          Length = 252

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 17/165 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VLG+ L + A  L+R       + L L +I  F    +P L+LI   +  +F  PVL   
Sbjct: 53  VLGVALGV-AMALAR----GPARVLLLAFIGFFR--AIPVLMLI---FWTYFLMPVLLHM 102

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N  G +TV         AL+    A++A  V +G++A   GQ +A ++LGLT  +  R V
Sbjct: 103 NVPGLATV-------VCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYV 155

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           LLPQA+R + P   +Q++ L+K++SLA  VG  +L  V   + N+
Sbjct: 156 LLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 200


>gi|308068846|ref|YP_003870451.1| Probable amino-acid ABC transporter permease protein ytmL
           [Paenibacillus polymyxa E681]
 gi|305858125|gb|ADM69913.1| Probable amino-acid ABC transporter permease protein ytmL
           [Paenibacillus polymyxa E681]
          Length = 259

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 76/133 (57%), Gaps = 3/133 (2%)

Query: 269 LYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           L+ A++ Y   + AFI+EI+RSG+ AV RGQ+EAA ++G++  +    +++PQA+  ++P
Sbjct: 97  LWFAVATYALNSGAFISEIIRSGVEAVDRGQIEAAQSVGMSGYQTFTRIIMPQALAVVVP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             ++  +  LK++SLA  +G  ++     T+ + T   +E  +    IYL +S+++    
Sbjct: 157 VFSNLVIGNLKDTSLAFTIGAMEMTGKSQTLGSATQHFVETYIALSLIYLVISLILQKLF 216

Query: 386 NRLNAKIALKEKK 398
             L   +   E +
Sbjct: 217 KVLENTLLRHEHR 229


>gi|262277478|ref|ZP_06055271.1| general L-amino acid transport system permease protein AapM [alpha
           proteobacterium HIMB114]
 gi|262224581|gb|EEY75040.1| general L-amino acid transport system permease protein AapM [alpha
           proteobacterium HIMB114]
          Length = 348

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 77/131 (58%), Gaps = 9/131 (6%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA++ + AA++AE+VR GL AV RGQ +A+ A+G+ + K+   ++LPQA++ +IP + + 
Sbjct: 220 IAITLFEAAYMAEVVRGGLQAVGRGQYDASKAIGMGYWKSHIFIILPQALKLVIPGIANT 279

Query: 331 YLNLLKNSSLAVAVGFAD---LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF-MN 386
           ++ L K++ L   VG  +   +V++  T     G A E      +++++L   I  F M+
Sbjct: 280 FIALFKDTPLVFVVGLLEILGMVNLAKTNPAWLGMATE-----GYVFVALVYWIFCFAMS 334

Query: 387 RLNAKIALKEK 397
           R +  I  K K
Sbjct: 335 RYSLSIEEKLK 345


>gi|238750615|ref|ZP_04612115.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
 gi|238711263|gb|EEQ03481.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
          Length = 219

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 92/176 (52%), Gaps = 18/176 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F +G+V+ L  +      H   G+    +YIS F   G P L  + L + L  +   
Sbjct: 31  VAGFFIGVVIYLMESG-----HSGFGRGFARVYISLFR--GTPVLAQVLLCFYLPGE--- 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +G S   P +++  +AL+  TAA+ ++I+RSG  A+  GQ+EAA   GL+ R+ 
Sbjct: 81  ------LGLSL--PGYLAAVMALTFNTAAYQSQILRSGFKAIAPGQLEAAAMCGLSSRQT 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              + +PQ +R  +P L S+ ++++K S++   +   DL+ VG  + + T + +E+
Sbjct: 133 LWHIQIPQVLRLTMPSLISELIDVIKASAVVSVIAITDLMRVGQQLASATYRPLEV 188


>gi|218283465|ref|ZP_03489465.1| hypothetical protein EUBIFOR_02055 [Eubacterium biforme DSM 3989]
 gi|218215847|gb|EEC89385.1| hypothetical protein EUBIFOR_02055 [Eubacterium biforme DSM 3989]
          Length = 240

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 18/188 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           +  G+ +  LYI  F   G P +V     Y  +  KPV+G      G           I 
Sbjct: 64  KNIGRIITGLYIWIFR--GTPMMVQAMFIY--YAGKPVIGWTPITAG----------LII 109

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AEI+RSG+ +V +GQ EAA++LG+T  +    V+ PQA+++  P + +Q +
Sbjct: 110 ISINTGAYMAEIIRSGIQSVDKGQNEAAMSLGMTTMQTLMYVVFPQAIKNSFPSIGNQLI 169

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN----RL 388
             +K+SS+   +   +L     ++     + +E  L+   +YL L+ + +  +N    R+
Sbjct: 170 VNIKDSSMLNVITVTELYFQTTSVAGSNYRVMETFLVSAILYLILTTLASFLLNYLEKRM 229

Query: 389 NAKIALKE 396
           +++ ++K+
Sbjct: 230 DSEGSMKD 237


>gi|126464335|ref|YP_001045448.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126106146|gb|ABN78676.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 370

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 74/132 (56%), Gaps = 3/132 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + + ++ + A + AE++R GL A+P GQ EAA +L L++ + TR ++LPQA+R  +
Sbjct: 235 KLLRITVGIAIFFACYQAEVIRGGLQAIPTGQYEAAASLSLSYWQTTRRIILPQALRISL 294

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMI 381
           P +T+  +  +KN+S  + +G  D+++    ++         IE  L    +YL     +
Sbjct: 295 PAITNHIIAAMKNTSFVIIIGLFDILTATTAVMQDPLWRKFYIEAYLFVAAVYLFFGYAL 354

Query: 382 ALFMNRLNAKIA 393
           +L+  ++   IA
Sbjct: 355 SLYARQVEKWIA 366


>gi|330861764|emb|CBX71938.1| hypothetical protein YEW_AJ02050 [Yersinia enterocolitica W22703]
          Length = 186

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 10/177 (5%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +FP   +   A   + S + G+  ++  T L        G    +L         +P ++
Sbjct: 17  TFPDGPLGGAALTLLISLLAGVASAILGTALGVALAMSRGVWAAVLAAVLGFFRAIPVIM 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI   +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A+  GQ
Sbjct: 77  LI---FWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIVAIGAGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L   G
Sbjct: 127 WQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNELTFFG 183


>gi|317404446|gb|EFV84860.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 368

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 75/126 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A+ +E  R+G+ ++ +GQMEAA+A+G++ R+A   VL+PQA R I+P L S 
Sbjct: 243 VALVLNVSAYNSETFRAGINSIRKGQMEAALAMGMSRRQAMFKVLVPQAARRILPVLAST 302

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L K++SL   +  ++L      +  Q+ + +E++     IY  +    A  ++ ++ 
Sbjct: 303 WISLFKDTSLVSVIAVSELAYASMQVRAQSFRVLEMLTAMAVIYWLMGYPQAKLVDWIHR 362

Query: 391 KIALKE 396
           K  +KE
Sbjct: 363 KYGVKE 368


>gi|269216149|ref|ZP_06160003.1| amino acid ABC transporter, permease protein [Slackia exigua ATCC
           700122]
 gi|269130408|gb|EEZ61486.1| amino acid ABC transporter, permease protein [Slackia exigua ATCC
           700122]
          Length = 217

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 18/166 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S  LGIV++L   R+SR          P+ +I+ F I  +    L+   + ++F      
Sbjct: 28  SLPLGIVVAL--ARMSR--------IKPISWITKFYISIMRGTPLMLQMFAIYFAP---- 73

Query: 253 QFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              ++ G  +SP  +F +  +A     AA+ AEI RSG+ +VPRGQ EAA  LG +  + 
Sbjct: 74  --YYVFGIELSPGSKFTATIVAFVVNYAAYFAEIYRSGIQSVPRGQYEAAAVLGYSRAQT 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
              ++LPQ ++ I+P + ++ + L+K++SLA ++G  ++ S    I
Sbjct: 132 FMKIVLPQVIKRILPAMGNEVVTLVKDTSLAFSIGVMEMFSSAKAI 177



 Score = 36.6 bits (83), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 33/58 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GFV T  + F  +I +  +G +V   R+S  K ++WI + Y+ + R  P ++ +F +Y
Sbjct: 13  GFVITLEIFFLTLIGSLPLGIVVALARMSRIKPISWITKFYISIMRGTPLMLQMFAIY 70


>gi|134278595|ref|ZP_01765309.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia pseudomallei 305]
 gi|134250379|gb|EBA50459.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia pseudomallei 305]
          Length = 218

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 7/168 (4%)

Query: 237 LIALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           ++ L  +L    P+L Q    F G    G  VSP +++  + L+ YT A++A+I R  + 
Sbjct: 52  IVILYVELFQGTPLLMQLFLGFFGLPLLGVDVSP-WVAATVTLTLYTGAYLADIWRGCVE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ  AA +LG+T  +  R V+ PQA +  +PP     + ++K+++L   +G  +L 
Sbjct: 111 AVPQGQWSAAASLGMTWTQQLRYVVWPQAWKIAVPPTVGFLVQVVKSTALTSIIGLTELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G  I N   +   I  +   +Y ++   +  +   L  +  +   +
Sbjct: 171 KTGTMITNAAFRPFPIYAMVALLYFAMCFPLTWYARVLERRYHVGRHR 218


>gi|332107599|gb|EGJ08823.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 231

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 53/86 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +S+  ALS    A++A  V +G+  V  GQ  A +ALG T   A R V+LPQA+R +
Sbjct: 94  PGVLSVMAALSLVGGAYLAHAVAAGIRGVGAGQWAAGLALGFTRWGALRHVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           +P   +Q++ L+K+SSLA  VG  +L
Sbjct: 154 LPSFVNQWVTLIKDSSLAYIVGVGEL 179


>gi|260223280|emb|CBA33684.1| General L-amino acid transport system permease protein aapM
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 367

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 54/78 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            ++ + AA++AE++R GL AVP+GQ+EAA  LGL++ +  R ++LPQA+  ++P + + +
Sbjct: 237 GITLFAAAYMAEVIRGGLQAVPKGQIEAAATLGLSYWQTQRKIVLPQALSMVVPGIMNNF 296

Query: 332 LNLLKNSSLAVAVGFADL 349
           ++  K++SL   V   +L
Sbjct: 297 ISTFKDTSLVTIVSLYEL 314


>gi|220910018|ref|YP_002485329.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7425]
 gi|219866629|gb|ACL46968.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7425]
          Length = 341

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 3/121 (2%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  + AA++AE VR GL +VPRGQ+EAA ALG        L++LPQA+R++IP +  Q+
Sbjct: 221 GLVLFNAAYLAENVRGGLQSVPRGQIEAAQALGFNIPLTLLLIVLPQALRTVIPAIVGQF 280

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++L+K++SL       +L  +  +I+ Q    G   E+ L    IY      ++ +  RL
Sbjct: 281 ISLIKDTSLLSLFALLELTGIARSILAQPQFLGHYTEVYLFIGLIYWFFCFTLSHYSRRL 340

Query: 389 N 389
            
Sbjct: 341 E 341


>gi|331091628|ref|ZP_08340462.1| hypothetical protein HMPREF9477_01105 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330403385|gb|EGG82944.1| hypothetical protein HMPREF9477_01105 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 229

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 18/165 (10%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG----KALPLLYISTFLIFGLPTLVLIALKYQL 244
           I +F+  +G+ + L    +     EK      K L  +YI+  +I G P +V + + Y L
Sbjct: 34  ISLFAIAIGVAIGLLIAVIKVSASEKKVLVGLKWLCNVYIT--VIRGTPVMVQLLIIYNL 91

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F             +  + E +   I     + A++AEI+R+G+ ++ +GQMEA  +LG
Sbjct: 92  VFT------------ARDTNEIVVGAICFGINSGAYVAEIIRAGIESIDKGQMEAGRSLG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             + +  R +++PQA+++I+P L+++++ L+K +S+A  +   DL
Sbjct: 140 FNYIQTMRYIIVPQAIKNILPALSNEFIVLIKETSVAGIIAVTDL 184


>gi|257056914|ref|YP_003134746.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586786|gb|ACU97919.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 241

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 2/127 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A      A+ AE+VR  L AVPR Q EAA+AL L+  +    V+ PQA+  +IP + + 
Sbjct: 92  LAFGLNYGAYGAEVVRGSLEAVPRPQWEAAVALNLSPTQRMTRVVWPQAIALMIPSMNNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK++ L   +   DL+++G +     G    I L+ M IY  L+  + L  N   A
Sbjct: 152 FIQLLKSTPLLYTISLVDLMTMGESFHEAGGDRTLIYLVLMAIYFVLAYAVTLLSNM--A 209

Query: 391 KIALKEK 397
           ++A+K +
Sbjct: 210 EVAVKAR 216


>gi|239815857|ref|YP_002944767.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802434|gb|ACS19501.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 219

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 75/126 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A+ AE  R+G+ ++ +GQ+EAA+A+G++ R+A   V++PQA R I+P + S 
Sbjct: 94  VALVLNISAYNAETFRAGINSIRKGQLEAALAMGMSRRQAMFKVVIPQAGRRILPVIAST 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L K++SL   +  ++L      I  QT + +E++     +Y  +    A  ++ ++ 
Sbjct: 154 WVSLFKDTSLVSVIAVSELAYTAMQIRAQTFRVLEMLTAMAVLYWLMGYPQAKLVDWIHR 213

Query: 391 KIALKE 396
           K  +KE
Sbjct: 214 KYGVKE 219


>gi|254450652|ref|ZP_05064089.1| amino acid ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198265058|gb|EDY89328.1| amino acid ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 207

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 14/170 (8%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIA 282
           ++  G P LV I + Y   +  P   Q  FI    + P F   +    +AL+  T A+++
Sbjct: 34  YIFRGTPILVQIFIVY---YGFP---QLEFIREGILWPIFRDPFGCAIVALTLNTGAYVS 87

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R G++ V RG +EA  ALGL   +    +  P A R  +P   +  ++LLK+++L  
Sbjct: 88  EILRGGVLGVDRGILEAGEALGLNRCQRFTYLTTPIAARLALPAYGNDVISLLKSTALVS 147

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +  AD+  +  TI+ QT    EI +    +Y+    +I LF+ +L A+I
Sbjct: 148 TITLADMTGIARTIVAQTYAPYEIFISLAIVYM----IITLFIQKLMARI 193


>gi|325278186|ref|ZP_08143685.1| amino acid ABC transporter, permease protein [Pseudomonas sp.
           TJI-51]
 gi|324096680|gb|EGB95027.1| amino acid ABC transporter, permease protein [Pseudomonas sp.
           TJI-51]
          Length = 239

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 23/184 (12%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250
           LG+V++L A         ++ K LP  + +TF  +  GLP   TL++I    Q+   K V
Sbjct: 40  LGLVVALAA---------RSRKRLPRAWATTFSTVFRGLPELLTLLIIYYGCQIAAQK-V 89

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L    + G   ++  F++  IA S   AAF +EI  +    +P+GQ EA  ALGL+ R  
Sbjct: 90  LAALGYEGEFLIN-TFVAAMIAFSLVFAAFSSEIWLAAFKTLPKGQWEACSALGLSKRTG 148

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              VLLPQ  R  +P L++ +L+LLK++SL   +   DL       + QT  A+ +    
Sbjct: 149 FFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDL-------MRQTNLAVSVTKEP 201

Query: 371 MFIY 374
           MF Y
Sbjct: 202 MFFY 205


>gi|169826265|ref|YP_001696423.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168990753|gb|ACA38293.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 227

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 72/119 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQMEAA ALG+ + K  + +++PQA+++I+P L ++
Sbjct: 102 IAFGLNSGAYISEIIRAGINAVDKGQMEAAQALGIPYAKMMKDIIIPQAVKNILPSLVNE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ L K +++   +   D++     +   T + +E +L    IY  +++++     R+ 
Sbjct: 162 FITLNKETAVVTVISALDIMRRAYIVGGSTYRYLEPLLFAGIIYYLMTLVLTFLGKRIE 220


>gi|152981388|ref|YP_001351724.1| ABC-type amino acid transport system, permease component
           [Janthinobacterium sp. Marseille]
 gi|151281465|gb|ABR89875.1| ABC-type amino acid transport system, permease component
           [Janthinobacterium sp. Marseille]
          Length = 218

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 58/97 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  + L+ ++A+F+AEI R  + A+PRGQ EA+  L + + +  R V+LPQA+R  
Sbjct: 84  PAWLAAGLTLTLWSASFLAEIWRGCVEAIPRGQWEASSVLAMNYVQQMRYVILPQALRIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +PP     + ++K +++   +GF +L      I N T
Sbjct: 144 LPPTIGFSVQIIKGTAVTSIIGFVELSKAATVITNAT 180


>gi|161521797|ref|YP_001585224.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189352041|ref|YP_001947668.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160345847|gb|ABX18932.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189336063|dbj|BAG45132.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 223

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 66/112 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     AF AE  R+G+ AVP+  ++AA+ALGL   + T  V+LPQA+R+ +P L + 
Sbjct: 96  LALGLNLTAFNAEAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRNAMPVLLTN 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +  L+ S+L   V  ADL+ V  ++  Q  + +E   +   +Y +LS+ IA
Sbjct: 156 GIGSLQQSALVAIVAVADLMYVAKSLATQAYRPLETYSVVALVYFALSLPIA 207


>gi|118475743|ref|YP_891955.1| amino-acid ABC transporter permease protein YckJ [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118414969|gb|ABK83389.1| probable amino-acid ABC transporter permease protein YckJ
           [Campylobacter fetus subsp. fetus 82-40]
          Length = 210

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 109/213 (51%), Gaps = 25/213 (11%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+    +GI+++L     S++      K +   YIS  +I G P LV +   + + +  P
Sbjct: 17  FILGISIGIMVALIRIDSSKNLLTTILKYICAFYIS--IIRGTPLLVQL---FIIFYGLP 71

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G        T++P F+S  IA S    A+ +E +R+ ++AVP+GQ EA  ++G+ +  
Sbjct: 72  NIG-------ITLNP-FISSIIAFSLNIGAYSSETIRASILAVPKGQWEAGWSIGMNNFD 123

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----E 365
               ++ PQA +  +P L++ +++L+K+SSLA  V  A+L     TI +Q  + +    E
Sbjct: 124 TFTKIIAPQAFKIALPTLSNTFISLVKDSSLASVVLVAELFREAQTIASQNYEFLLTYSE 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             LI+         +I +F+  L  K+ +K  K
Sbjct: 184 AALIYW--------VICIFLGYLQTKLEIKFSK 208


>gi|229588842|ref|YP_002870961.1| histidine ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229360708|emb|CAY47566.1| histidine ABC transport system, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 242

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 2/174 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L +       + G  +F+    +  + F +  I L     A+  E 
Sbjct: 67  TTLIRGVPDLVLMLLIFY-SLQTWLTGLTDFMEWEYIEIDPFSAGVITLGFIYGAYFTET 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AVPRGQ+EAA A GL   +  R V  PQ MR  +P + + ++ +LK ++L   +
Sbjct: 126 FRGAILAVPRGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVSII 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ADLV         T Q    +++   IYL ++      + RL  + +   ++
Sbjct: 186 GLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERRYSAGSRE 239


>gi|302522278|ref|ZP_07274620.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|302431173|gb|EFL02989.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 300

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 92/163 (56%), Gaps = 16/163 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V +  LG V  +   RLS H   +   A  + +  +     +P L+++ + Y ++    
Sbjct: 79  MVIALPLGAVFGI--ARLSDHVWVRVPSATVVEFFRS-----IPVLIMMIVAYAVY---- 127

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q+  +  ST      ++   L  Y A+ +AEIVR+G++++P+GQ EAA A+GL   +
Sbjct: 128 --AQYTSV--STDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQ 183

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351
             R +LLPQ++ +++P + SQ + ++K++++  ++ GF++L++
Sbjct: 184 TMRSILLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELIN 226


>gi|303247500|ref|ZP_07333772.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491196|gb|EFL51088.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 230

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 3/140 (2%)

Query: 257 IGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           IGG    +SP + S+ I  +  + A+ +E +R GL+++ RGQ+ AA ALG+T       V
Sbjct: 84  IGGWRCILSPMWASI-IGFALCSGAYQSEYIRGGLLSIKRGQLRAAQALGMTPFTTITSV 142

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R  +P   ++ + L+K SSLA  +  +DL  +G ++   T +  E+ ++    Y
Sbjct: 143 VLPQAFRRALPGCGNEIIYLIKYSSLASIITVSDLTGMGRSLAKATFRNTEVFVVVGVYY 202

Query: 375 LSLSIMIALFMNRLNAKIAL 394
           L+L  +  L +  +  ++ L
Sbjct: 203 LALVTVATLVLRSVEKRLEL 222


>gi|294632492|ref|ZP_06711052.1| amino acid ABC transporter, permease [Streptomyces sp. e14]
 gi|292835825|gb|EFF94174.1| amino acid ABC transporter, permease [Streptomyces sp. e14]
          Length = 333

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS   AA+ AE+VR G+++V +GQ EAA ALGL        ++LPQA+RSI+P   +Q
Sbjct: 178 VGLSLNEAAYAAEVVRGGVLSVDQGQHEAAAALGLPRGYRFTRIVLPQALRSIVPNYVNQ 237

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L+K +SL   V   DL     ++G T        + ++ +W  I  SL  +   ++ 
Sbjct: 238 LIGLVKATSLVFYVSLLDLFGTAQTMGSTYPGDIVPLLLVVTVWYLILTSLFSVAQFYVE 297

Query: 387 RLNAKIALK 395
           R  A+ A +
Sbjct: 298 RHYARGATR 306


>gi|91780197|ref|YP_555404.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692857|gb|ABE36054.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 231

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 19/137 (13%)

Query: 224 ISTFLIFGLPTLVLIA------------LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           +S  +  GLP L+L+A            L +   F  PVL   +  G +TV         
Sbjct: 49  VSLVMTRGLPHLLLLAVVGLFRAIPVLMLIFWTFFLMPVLLHVDVPGLATV-------VC 101

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+    A+++  V++G++AV  GQ +AA +LG+T  +A R VLLPQA+R++ P   +Q+
Sbjct: 102 ALALIGGAYLSHSVQAGIVAVGDGQWQAAQSLGMTRGQALRHVLLPQAIRTMTPSFVNQW 161

Query: 332 LNLLKNSSLAVAVGFAD 348
           ++L+K++SLA  VG  +
Sbjct: 162 VSLIKDTSLAYIVGVPE 178


>gi|304396807|ref|ZP_07378687.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355603|gb|EFM19970.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 216

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 95/177 (53%), Gaps = 17/177 (9%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS  L+ G P +V +   + + F  P LG    +GG  +    ++  IA+   + A++
Sbjct: 56  LYIS--LMRGTPAIVQL---FVVFFTLPRLG----LGGHPM----LAAVIAIGFNSGAYV 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R     V RGQ EAA  LGL+       V+ PQ +RS +P L S++  LLK + LA
Sbjct: 103 AEILRVNQSLVTRGQREAARTLGLSRWLTWWYVINPQVVRSSLPMLVSEFTILLKTTPLA 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             V   +L   G  +I +T +A +++L+    YL    +IAL + R+  ++ L+ K+
Sbjct: 163 SVVALTELTYAGQIVIARTYEATQVLLLVAAGYL----LIALPLMRIARRLELRGKR 215


>gi|323529860|ref|YP_004232012.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386862|gb|ADX58952.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 216

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP  ++   A+S  +A++IAEI+R G +++P G +EAA  LGL+     R +L+PQ
Sbjct: 81  GINVSP-LVAAVSAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLSPFDTLRRILVPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +P L ++ + L+K SSL   VG A+L      I   T + +E  L    IY  + 
Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYLAAGLIYFVIC 199

Query: 379 IMIALFMN 386
             +AL  +
Sbjct: 200 GALALIAH 207


>gi|256847978|ref|ZP_05553422.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256715038|gb|EEU30015.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 215

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 24/158 (15%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG+V  +   +    F+    +  PLL    F+ +GLP   ++ + +Q  FD  +     
Sbjct: 40  LGLVSKIRPLKWVLEFYVWLMRGTPLLLQLIFVFYGLP---IVGIVFQ-RFDAAL----- 90

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                          +A     AA+ AEI R GL ++  GQ E A  LGL++ +  R ++
Sbjct: 91  ---------------VAFILNYAAYFAEIFRGGLQSIDEGQYEGARVLGLSYWQTVRKIV 135

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +PQ ++ +IP + ++ +NL+K+SSL   +G  DL+  G
Sbjct: 136 IPQVVKIVIPSIGNEVVNLVKDSSLVYVIGLGDLLRAG 173


>gi|227112141|ref|ZP_03825797.1| octopine transport system permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|227326810|ref|ZP_03830834.1| octopine transport system permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 244

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 94/163 (57%), Gaps = 14/163 (8%)

Query: 226 TFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278
           T+++F  G P LV + L Y        LGQF ++  S +      P + +L ++LS  T 
Sbjct: 55  TYVLFFRGTPLLVQLFLIYY------GLGQFTWVRESMLWPFLREPHWCAL-LSLSLCTG 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI+R GL +VP GQ+E+A A G+      + ++ P A+R  +P   ++ ++++K++
Sbjct: 108 AYASEIIRGGLQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKST 167

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SLA  +   ++  +   +I +T +A+E+ L+   IYL +++++
Sbjct: 168 SLASIITLMEITGIAARLIAETYRALEVFLVAGAIYLFINLIL 210


>gi|291301453|ref|YP_003512731.1| polar amino acid ABC transporter inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
 gi|290570673|gb|ADD43638.1| polar amino acid ABC transporter, inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
          Length = 310

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 55/80 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS Y  A +AEI+RSG+ A+P GQ  A  A+GL H +  R +++PQA+R+++P + +Q
Sbjct: 153 IGLSIYNGAVLAEILRSGINALPPGQAMAGHAVGLRHGQVMRSIVMPQAIRNMLPAVLAQ 212

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            + L K++SL  A+ + +L+
Sbjct: 213 LIILFKDTSLGYAITYPELL 232



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + T   AF G I A +IG +VG GR+S  K +  I  VYV+ FR+IP L++I+  Y
Sbjct: 70  GLLGTLRAAFFGCIGALVIGVIVGMGRVSRFKFIRAISAVYVQFFRSIPLLLLIWIPY 127


>gi|154244133|ref|YP_001415091.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154158218|gb|ABS65434.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 217

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 71/141 (50%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           I G    P  ++  + L+ Y++ F+AEI R  + +VP+ Q EAA  L L+  +    V+L
Sbjct: 77  IAGFKEVPAILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRLTRVIL 136

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQAMR    P     + ++KN+SLA  VGF +L   G  + N   +   I ++   IY  
Sbjct: 137 PQAMRIATAPTVGFLVQIVKNTSLASVVGFVELSQAGKLVNNSIFEPFTIFMVVAAIYFV 196

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           L   ++ +   L  K+ +  +
Sbjct: 197 LCYPLSTWSRSLERKLNVGRR 217


>gi|311106550|ref|YP_003979403.1| glutamine transporter permease GlnP [Achromobacter xylosoxidans A8]
 gi|310761239|gb|ADP16688.1| glutamine transport system permease protein GlnP [Achromobacter
           xylosoxidans A8]
          Length = 198

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 12/186 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R +      A+  +Y++  +I G P +V +   Y   F  P+L          V  E+
Sbjct: 22  VTRAYGHPVLSAIAQVYVA--VIRGTPIVVQVMFIY---FALPLLANIR------VDAEW 70

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            ++ + L   + A+I+EIVR  L++V +G  EA  A+GL   K    ++ P A R +IPP
Sbjct: 71  AAI-VTLIINSGAYISEIVRGALLSVHKGLKEAGQAMGLPFHKILLHIIGPVAFRRMIPP 129

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q +  LK+SSL + +G A+L   G  I+    +A+EI      +YL L+ ++AL ++
Sbjct: 130 LGNQCIISLKDSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGLMALALH 189

Query: 387 RLNAKI 392
            +  ++
Sbjct: 190 LVERRM 195


>gi|299541711|ref|ZP_07052041.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725806|gb|EFI66440.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 219

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 72/119 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+I+EI+R+G+ AV +GQMEAA ALG+ + K  + +++PQA+++I+P L ++
Sbjct: 94  IAFGLNSGAYISEIIRAGINAVDKGQMEAAQALGIPYAKMMKDIIIPQAVKNILPSLVNE 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ L K +++   +   D++     +   T + +E +L    IY  +++++     R+ 
Sbjct: 154 FITLNKETAVVTVISALDIMRRAYIVGGSTYRYLEPLLFAGVIYYIMTLVLTFLGKRIE 212


>gi|300721603|ref|YP_003710878.1| putative amino acid ABC transporter membrane protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628095|emb|CBJ88646.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 238

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 14/157 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LGI L  F   L R +  K   A+   Y+  +LI G P LV + L +   +  P +G
Sbjct: 31  TFALGISLG-FIVALIRLYGPKPLIAVVRFYV--WLIRGTPLLVQLFLIF---YALPSVG 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                        F S  I  +    A+ +E++R+ LI+VP+GQ EA+ ++G++  ++ R
Sbjct: 85  --------ITLEAFTSAVIGFTLNVGAYTSEVIRAALISVPKGQWEASHSIGMSWWQSLR 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 137 RIVLPQAARFSIPPLSNTFISLVKDTSLASVITVPEM 173


>gi|298290389|ref|YP_003692328.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926900|gb|ADH87709.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 541

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 53/79 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   A FIAEI+RS +I V RGQ+ A  ALG+T     R V+ PQA+RS++P L ++
Sbjct: 91  LALALNEAPFIAEILRSNVIGVDRGQVSAGQALGMTPAAIMRRVIAPQAIRSMVPALGNE 150

Query: 331 YLNLLKNSSLAVAVGFADL 349
            ++ LKNSSLA  V   +L
Sbjct: 151 AVSALKNSSLASVVAVQEL 169


>gi|221197498|ref|ZP_03570545.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221204171|ref|ZP_03577189.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221176337|gb|EEE08766.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221184052|gb|EEE16452.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 223

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 66/112 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     AF AE  R+G+ AVP+  ++AA+ALGL   + T  V+LPQA+R+ +P L + 
Sbjct: 96  LALGLNLTAFNAEAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRNAMPVLLTN 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +  L+ S+L   V  ADL+ V  ++  Q  + +E   +   +Y +LS+ IA
Sbjct: 156 GIGSLQQSALVAIVAVADLMYVAKSLATQAYRPLETYSVVALVYFALSLPIA 207


>gi|83720853|ref|YP_442092.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|257138278|ref|ZP_05586540.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|83654678|gb|ABC38741.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis E264]
          Length = 219

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 14/211 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLVVA-IVRIGNNRFLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 AQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L    IY  LS ++A    R+  + AL    
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCALPSTH 219


>gi|226363678|ref|YP_002781460.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242167|dbj|BAH52515.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 243

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AE+VR  + +VP+ Q EAA AL  +H +  R V+ PQA   +IPPLT+ 
Sbjct: 93  LALGLNYGAYGAEVVRGAINSVPQSQWEAATALDFSHWQRLRRVVFPQAWAEMIPPLTNL 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++LA  +   DL      +   TG  +    + + IY  +  ++ L MN L  
Sbjct: 153 LIQLLKGTALASYILLQDLTFEIDQLRQTTGNTLFAFGVGLVIYFVIGYVLTLLMNALEV 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|186472702|ref|YP_001860044.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia phymatum STM815]
 gi|184195034|gb|ACC72998.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia phymatum STM815]
          Length = 223

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 67/123 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ +EI+R  L +VP GQ EAA+AL ++     R ++LPQAM + +PP T+ 
Sbjct: 88  VGLGLHYGAYGSEILRGALRSVPGGQFEAAVALNMSAFTRMRRIVLPQAMINALPPATNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +SL   +  +DL      +   T +  EI  + + IY  L+ ++A  M     
Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDEATFKTAEIFCLTLIIYFVLAQLLATLMRHFER 207

Query: 391 KIA 393
           +++
Sbjct: 208 RVS 210



 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A  G + A  +  +  A +L+    V W+  VYVEVFR    LV +F+ 
Sbjct: 8   LLQGTIVTIEIAAFGTLLAIAMAFVATAAKLAPWAPVRWVGNVYVEVFRGTSLLVQLFWF 67

Query: 149 YKSVLSVLPIPDHSIVL-PFGMFLNNRGLSF 178
           +     VLP+P   I L PF + +   GL +
Sbjct: 68  F----FVLPLPPFRIELTPFTVAIVGLGLHY 94


>gi|309779094|ref|ZP_07673861.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Ralstonia sp. 5_7_47FAA]
 gi|308922159|gb|EFP67789.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Ralstonia sp. 5_7_47FAA]
          Length = 233

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF++    ++ Y  AF +E +R+G+ AVPR   EAA++LG T R A   V+LPQA+R   
Sbjct: 95  EFLAATFGIALYAGAFFSEELRAGIRAVPR---EAALSLGFTPRAAFLRVVLPQALRVSA 151

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350
            PL  Q  N +KN+SLA+ +G A+L 
Sbjct: 152 LPLLGQCANTIKNTSLAMGIGLAELA 177


>gi|237799755|ref|ZP_04588216.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022610|gb|EGI02667.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 277

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 76/123 (61%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+  IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP
Sbjct: 144 MAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPP 203

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            T+Q++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +
Sbjct: 204 TTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQS 263

Query: 387 RLN 389
           RL 
Sbjct: 264 RLE 266


>gi|312278333|gb|ADQ62990.1| L-cystine transport system permease protein TcyB [Streptococcus
           thermophilus ND03]
          Length = 190

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 11/164 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV++   + L+F  P +G           P  +   I  S  +AA++AEI RS + 
Sbjct: 37  GVPMLVVL---FILYFGLPYVG--------IQIPTLLCAIIGFSTVSAAYMAEIFRSSIS 85

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ +AA +LGL  +     ++LPQA+R  + P  +  ++++K+SSLA  +   D+ 
Sbjct: 86  AVDKGQWKAAQSLGLPQKPIIHHIILPQALRIAVAPTCNVIIDMVKSSSLAAMITVPDIF 145

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                I  +    + + ++  FIY  LS ++ L   ++  ++ +
Sbjct: 146 QNAKIIGGREYDYMSMYILITFIYWVLSFILELLQGQVEKRLTV 189


>gi|238894936|ref|YP_002919670.1| amino acid ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238547252|dbj|BAH63603.1| amino acid ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 308

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 76/134 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL+++ +++  
Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAI 265

Query: 385 MNRLNAKIALKEKK 398
              +   +A  E++
Sbjct: 266 QYLVERGLARSERR 279


>gi|295836169|ref|ZP_06823102.1| glutamate permease [Streptomyces sp. SPB74]
 gi|197695266|gb|EDY42199.1| glutamate permease [Streptomyces sp. SPB74]
          Length = 301

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 93/162 (57%), Gaps = 16/162 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +  LG +  +   RLS H   +    +P   +  F    +P L+++ + Y+++     
Sbjct: 80  VIALPLGAIFGI--ARLSDHAWVR----VPAATVVEFF-RSIPVLIMMIVAYEVY----- 127

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             Q+  +  ST      ++   L  Y A+ +AEIVR+G++++P+GQ EAA A+GL   + 
Sbjct: 128 -AQYTSV--STDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQI 184

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351
            R +LLPQ++ +++P + SQ + ++K++++  ++ GF++L++
Sbjct: 185 MRSILLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELIN 226


>gi|17549795|ref|NP_523135.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17432050|emb|CAD18727.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 226

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 15/162 (9%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            RLSR+   +  + + + ++S   I G P L+ + L Y  +   P+LG        ++SP
Sbjct: 46  ARLSRY---RLLRGMVMAWVSA--IRGTPALIHMLLAY--YVVPPLLGL-------SISP 91

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
               +  AL+C T+A++ EI+R  L +VP  Q  AA ALG+   +  R VLLPQ     I
Sbjct: 92  LAAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAI 150

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           PPLTS++  LLK SSL   +   +L +V      Q+   +++
Sbjct: 151 PPLTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQV 192


>gi|225870676|ref|YP_002746623.1| transport system membrane protein [Streptococcus equi subsp. equi
           4047]
 gi|225700080|emb|CAW94151.1| transport system membrane protein [Streptococcus equi subsp. equi
           4047]
          Length = 217

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 70/125 (56%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           Y+  S  +AA+I+E+ R+ + A+ +GQ EAA ALGL +    + V+LPQA R  IPPL +
Sbjct: 91  YLGFSLVSAAYISEVFRASIDAIDQGQWEAARALGLPYVSIVKHVILPQAFRIAIPPLGN 150

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             ++++K+SSLA  +   D+      I  +    + + ++  FIY  ++ ++      L 
Sbjct: 151 VVIDMVKSSSLAAMITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQGFLE 210

Query: 390 AKIAL 394
            ++ L
Sbjct: 211 KRLRL 215


>gi|206576764|ref|YP_002238287.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935273|ref|YP_003439332.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290509327|ref|ZP_06548698.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|206565822|gb|ACI07598.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288889982|gb|ADC58300.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289778721|gb|EFD86718.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 308

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 76/134 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL+++ +++  
Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAI 265

Query: 385 MNRLNAKIALKEKK 398
              +   +A  E++
Sbjct: 266 QYLVERALARSERR 279


>gi|254437975|ref|ZP_05051469.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198253421|gb|EDY77735.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 222

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 73/123 (59%), Gaps = 11/123 (8%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + I G PTL+ I   + ++F  P LG    +G   ++P +++  +AL     A++AEI+R
Sbjct: 63  WFIRGTPTLIQI---FMIYFGLPQLG----LG---LNP-YVAGILALGLSGGAYVAEILR 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG  A+P GQ EA  +LGL        V+LPQ +R ++P LT++ +N LKN+SL  A+  
Sbjct: 112 SGFNAIPNGQFEAGRSLGLPTWAILWFVVLPQLLRIVVPALTNEAMNTLKNTSLLSAITI 171

Query: 347 ADL 349
            ++
Sbjct: 172 VEI 174


>gi|50123003|ref|YP_052170.1| octopine transport system permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613529|emb|CAG76980.1| octopine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 244

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 95/163 (58%), Gaps = 14/163 (8%)

Query: 226 TFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278
           T+++F  G P LV + L Y        LGQF ++  S +      P++ +L ++LS  T 
Sbjct: 55  TYVLFFRGTPLLVQLFLIYY------GLGQFPWVRESILWPFLREPQWCAL-LSLSLCTG 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI+R GL +VP GQ+E+A A G+      + ++ P A+R  +P   ++ ++++K++
Sbjct: 108 AYASEIIRGGLQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKST 167

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SLA  +   ++  +   +I +T +A+E+ L+   IYL +++++
Sbjct: 168 SLASIITLMEITGIAARLIAETYRALEVFLVAGAIYLFINLIL 210


>gi|21224121|ref|NP_629900.1| glutamate permease [Streptomyces coelicolor A3(2)]
 gi|289768688|ref|ZP_06528066.1| glutamate permease [Streptomyces lividans TK24]
 gi|2687340|emb|CAA15881.1| glutamate permease [Streptomyces coelicolor A3(2)]
 gi|289698887|gb|EFD66316.1| glutamate permease [Streptomyces lividans TK24]
          Length = 222

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 80/139 (57%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G S  +  F    + L  YT+AF+ E +RSG+  VP GQ EAA A+GL+  +  RLV+LP
Sbjct: 84  GDSFETINFRLAVLGLVLYTSAFVCEALRSGINTVPVGQAEAARAIGLSFGQVLRLVVLP 143

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA RS + PL +  + L+KN+++A A+G A+  ++   +I    Q + I  I    ++ L
Sbjct: 144 QAFRSTVGPLANVLIALIKNTTVAAAIGVAEAAALMKDMIENEAQLLLISAIIAVGFVIL 203

Query: 378 SIMIALFMNRLNAKIALKE 396
           ++   L +  +  K+A+K 
Sbjct: 204 TLPTGLILGWVGKKVAVKR 222


>gi|126454206|ref|YP_001067296.1| polar amino acid ABC transporter permease [Burkholderia
           pseudomallei 1106a]
 gi|167825402|ref|ZP_02456873.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 9]
 gi|226193854|ref|ZP_03789456.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237813419|ref|YP_002897870.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242317625|ref|ZP_04816641.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254191836|ref|ZP_04898339.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|126227848|gb|ABN91388.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|157939507|gb|EDO95177.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|225934159|gb|EEH30144.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237506596|gb|ACQ98914.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242140864|gb|EES27266.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1106b]
          Length = 219

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    IY  LS ++A    R+  + AL
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 12/96 (12%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F +Y  
Sbjct: 17  GAVLTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                 +PD       G+ L+       TLT++  A
Sbjct: 77  ------LPD------IGISLDPTAAGIFTLTLNAGA 100


>gi|329939956|ref|ZP_08289238.1| glutamate uptake system [Streptomyces griseoaurantiacus M045]
 gi|329300782|gb|EGG44678.1| glutamate uptake system [Streptomyces griseoaurantiacus M045]
          Length = 308

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 81/146 (55%), Gaps = 4/146 (2%)

Query: 256 FIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           ++  + +S E   LY     L  Y A+ +AEIVR+G++++P+GQ EAA A+GL   +   
Sbjct: 126 YVQSTDISSESRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQSEAAHAIGLRKSQTMT 185

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWM 371
            +LLPQA+  ++P + SQ + ++K+++L  AV  F +L+S   T        I   ++  
Sbjct: 186 SILLPQAVTVMLPAIVSQLVVIVKDTALGGAVLNFTELLSARKTEAAFYANVIPSFVVVG 245

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            IY+ L++ +  F   L  K+   ++
Sbjct: 246 LIYILLNLALTTFAGWLERKLRRSKR 271



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+T  +++ T +L G   T   A   M+ A  +G L G  RLS ++ V     V VE FR
Sbjct: 52  PFTLSTTWTTYLLPGLGETLKAAALSMVIALPLGALFGIARLSDHRWVRVPAGVIVEFFR 111

Query: 138 NIPPLVVIFF 147
           +IP L+++ F
Sbjct: 112 SIPVLLMMIF 121


>gi|188532631|ref|YP_001906428.1| GltK protein [Erwinia tasmaniensis Et1/99]
 gi|188027673|emb|CAO95524.1| GltK protein [Erwinia tasmaniensis Et1/99]
          Length = 229

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 19/180 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TL M T+A     + +LG++++  A R         G    +L++    I G+P + +I 
Sbjct: 31  TLIMATSAGFL--ALMLGVLMAGLAWRYG-------GWTRRVLFLWASFIRGIPLIFVI- 80

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             + L+F  PV+      GGS   P  +++ IAL+ +T+A +     +GL ++P GQ EA
Sbjct: 81  --FWLYFLLPVV-----FGGSIPGP--LTVIIALAWFTSAAVMHSTLAGLESLPAGQTEA 131

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            IA G +  K   ++LLPQA  +++P      ++LLK++SLA  V   +L +V G + N+
Sbjct: 132 GIASGFSKIKILTVILLPQAWPNLLPSYLGLLISLLKDTSLAFIVNVPELTTVAGQVNNR 191


>gi|167580938|ref|ZP_02373812.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis TXDOH]
          Length = 219

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 14/211 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLVVA-IVRIGNNRFLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 AQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L    IY  LS ++A    R+  + AL    
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCALPSTH 219


>gi|210630270|ref|ZP_03296360.1| hypothetical protein COLSTE_00244 [Collinsella stercoris DSM 13279]
 gi|210160596|gb|EEA91567.1| hypothetical protein COLSTE_00244 [Collinsella stercoris DSM 13279]
          Length = 290

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 95/167 (56%), Gaps = 17/167 (10%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGL 289
           G+P+L+LI      +F   V+ Q+    G  +S  +M +L +AL+   +  +AE+ R+G+
Sbjct: 127 GVPSLLLI------YFFFLVVPQY----GIRMSSFWMITLPVALAA--SGVLAEVFRAGM 174

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ EAA+ALG+   +    ++LPQA+R +IP L SQ + ++K++++A  V + D+
Sbjct: 175 NAVPRGQTEAALALGMRPFRVKLKIVLPQAIRYVIPSLISQLVVVVKDTTVAYVVSYPDM 234

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     +I      +   L+   IY+ L+  I    N+L+  +A + 
Sbjct: 235 LQNARVLITNYDALVSTYLVVAVIYILLNYAI----NQLSVYVARRS 277



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 7/85 (8%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  S++A  ++ G   T  +A +    A ++G  +  GR S  + +A +CRV  + FR 
Sbjct: 69  FTWGSTWAY-LMAGLRGTLTVALTAGAIALVLGLALMLGRTSGIRWLAALCRVVTDFFRG 127

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSI 163
           +P L++I+F +      L +P + I
Sbjct: 128 VPSLLLIYFFF------LVVPQYGI 146


>gi|29833750|ref|NP_828384.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29610874|dbj|BAC74919.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 318

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 4/130 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS   AA+ AE+VR G+++V +GQ EAA ALGL        ++ PQA+RSI P   +Q
Sbjct: 163 VGLSLNEAAYAAEVVRGGILSVDQGQHEAAAALGLPKSYQFTKIVFPQALRSITPNYVNQ 222

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L+K +SL   V   DL     ++G T        + ++ +W  I  S+  ++  ++ 
Sbjct: 223 LIGLIKGTSLVFYVSLLDLFGSAQTMGSTYPGDIVPLLLVVTVWYLILTSIVSVVQFYVE 282

Query: 387 RLNAKIALKE 396
           R  A+ A + 
Sbjct: 283 RHYARGATRS 292


>gi|90581126|ref|ZP_01236925.1| Putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90437647|gb|EAS62839.1| Putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 223

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 92/173 (53%), Gaps = 19/173 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238
           TL M T   IF  + V+G++L+L      R +       L  LYIS F   G P LV L 
Sbjct: 22  TLLMATIGAIF--ALVVGLILALV-----RIYQLPLLNTLTQLYISFFR--GTPLLVQLF 72

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L Y L    P L   +          F +  I LS + AA++AE +R+ +  V R Q E
Sbjct: 73  LLYYGLPQIIPSLVGLD---------AFSAAVIGLSLHFAAYMAESIRAAITGVDRSQRE 123

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A++A+G+T  +  R ++LPQA R  +P L + +++++K++SLA  +G  ++++
Sbjct: 124 ASLAIGMTEWQTMRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVPEIMA 176


>gi|318060996|ref|ZP_07979717.1| glutamate transporter permease [Streptomyces sp. SA3_actG]
          Length = 300

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 92/163 (56%), Gaps = 16/163 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            V +  LG V  +   RLS H   +   A  + +  +     +P L+++ + Y ++    
Sbjct: 79  MVIALPLGAVFGI--ARLSDHVWVRVPSATVVEFFRS-----IPVLIMMIVAYAVY---- 127

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q+  +  ST      ++   L  Y A+ +AEIVR+G++++P+GQ EAA A+GL   +
Sbjct: 128 --AQYTSV--STDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQ 183

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351
             R +LLPQ++ +++P + SQ + ++K++++  ++ GF++L++
Sbjct: 184 TMRSILLPQSVTAMLPAIVSQLVVIVKDTAIGGSILGFSELIN 226


>gi|222148523|ref|YP_002549480.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735509|gb|ACM36472.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 267

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 11/211 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +  G  F  +T+   A    F  ++G +++L AT+ S     +         I T +  G
Sbjct: 47  DEIGFGFK-VTVTLAAATLPFGLLIGFLMAL-ATQSSERMLRQAAA------IYTTIFRG 98

Query: 232 LPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           LP L+ + + Y       + VL    F     ++  F  + IAL+   +++ AE+++S  
Sbjct: 99  LPELLTLFIVYYGSQILIQAVLASMGFEERIEINAFFAGM-IALALVFSSYCAEVLQSAF 157

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ EA  A+GL+  K   LV++PQ +R  +P + + ++NLLK+++L   +G +D+
Sbjct: 158 RAIPSGQYEAGFAIGLSRTKTMLLVIVPQLIRIALPGIVNLWMNLLKDTALVSVIGLSDI 217

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +   G     T +A     I   +YL L+I+
Sbjct: 218 IRQTGIAARVTKEAFLFYTIACALYLVLAIL 248


>gi|220929054|ref|YP_002505963.1| polar amino acid ABC transporter inner membrane subunit
           [Clostridium cellulolyticum H10]
 gi|219999382|gb|ACL75983.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulolyticum H10]
          Length = 248

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 96/181 (53%), Gaps = 14/181 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH---FDK 248
           F+ VLG++L+    +LS++   +  + +  LYI   L   +PTL+ +   Y +    F +
Sbjct: 40  FAVVLGVLLTF--GQLSKY---RVIRFISFLYIE--LCRNIPTLIWLLFFYYVFPELFSE 92

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+    N    +  +  F +    LS  ++ +I+EI+R G+  V + Q+ AA  LG +  
Sbjct: 93  PIKTMLN----NNQALNFWAAIAGLSISSSGYISEIIRGGISGVSKEQVSAARTLGHSQW 148

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++ PQA+R   PPL S+ ++ +KNSSLA+A+   ++V     I + T + IE  +
Sbjct: 149 EIWIYIIWPQAIRICFPPLVSRLIHNMKNSSLALALSVHEIVWATQQIESITFRGIEATI 208

Query: 369 I 369
           I
Sbjct: 209 I 209



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 6/72 (8%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           A ++G L+  G+LS  +++ +I  +Y+E+ RNIP L+ + F Y     +   P  +    
Sbjct: 41  AVVLGVLLTFGQLSKYRVIRFISFLYIELCRNIPTLIWLLFFYYVFPELFSEPIKT---- 96

Query: 167 FGMFLNNRGLSF 178
             M  NN+ L+F
Sbjct: 97  --MLNNNQALNF 106


>gi|289678375|ref|ZP_06499265.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 277

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|311108218|ref|YP_003981071.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 18 [Achromobacter
           xylosoxidans A8]
 gi|310762907|gb|ADP18356.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 18
           [Achromobacter xylosoxidans A8]
          Length = 230

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 71/127 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L+    A++AE+ RSG+ +V  GQ EAA ALGL   +  R ++LPQA+R++ P
Sbjct: 86  FVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLGKVQRLRRIVLPQALRTVFP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +  L L+K +SL   +   +L+  G  +   T QA+ +  +   IY ++  ++A   
Sbjct: 146 ALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALTVYTMVGVIYFAMCSVLAYLF 205

Query: 386 NRLNAKI 392
            R   ++
Sbjct: 206 RRSEKRL 212


>gi|293605651|ref|ZP_06688030.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292815935|gb|EFF75037.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 218

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 12/186 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R +      A+  +Y++  +I G P +V +   Y   F  P+L          V  E+
Sbjct: 42  VTRAYGHPILSAIAQVYVA--VIRGTPIVVQVMFIY---FALPLLADIR------VDAEW 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            ++ + L   + A+I+EIVR  L++V +G  EA  A+GL   K    ++ P A R +IPP
Sbjct: 91  AAI-VTLIINSGAYISEIVRGALLSVHKGLKEAGQAMGLPFHKILFHIIGPVAFRRMIPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q +  LK+SSL + +G A+L   G  I+    +A+EI      +YL L+ ++AL ++
Sbjct: 150 LGNQCIISLKDSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGLMALGLH 209

Query: 387 RLNAKI 392
            +  ++
Sbjct: 210 LVEKRM 215


>gi|159185731|ref|NP_357188.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
 gi|159140865|gb|AAK89973.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
          Length = 603

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 5/146 (3%)

Query: 255 NFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           NFI  +T      F +  + L+   AAF +EIVR G+++V +GQ+EAA ALGL  R+   
Sbjct: 159 NFISWNTTQLMTPFAAAILGLTLNQAAFASEIVRGGILSVDQGQLEAAAALGLPRRRQAS 218

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---I 369
            ++LPQAMRSI+P   +  + L K +S    +   +L      I  +  + I +++   +
Sbjct: 219 RIILPQAMRSILPTAFNDIIGLAKGTSQVYILALPELFYTIQIIYRRNLEVIPLLMVATV 278

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
           W  + L+   ++   + R  ++ AL+
Sbjct: 279 WYLVILTALSIVQHHIERHFSRGALR 304


>gi|329999713|ref|ZP_08303488.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|328538244|gb|EGF64390.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 308

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 76/134 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL+++ +++  
Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAI 265

Query: 385 MNRLNAKIALKEKK 398
              +   +A  E++
Sbjct: 266 QYLVERGLARSERR 279


>gi|291457926|ref|ZP_06597316.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291419470|gb|EFE93189.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 215

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++P+GQ EAA  LG +  ++   ++LPQ ++ I+P +T++ + L+K+
Sbjct: 97  AAYFAEIYRSGIQSIPKGQYEAAEILGYSRAQSFLRIILPQVIKRILPAVTNEVITLVKD 156

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA ++   ++ +    + +       +I   +F Y+  + ++A  M RL  ++
Sbjct: 157 TSLAFSISVMEMFTAAKALSSAQSSMTPLIAAGIFYYI-FNFIVAFLMERLEKRL 210


>gi|153011816|ref|YP_001373029.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563704|gb|ABS17200.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 216

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 54/90 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y++A++ E     ++A+P+GQ EA+ +LGL      RL++LPQA+R  +PP    
Sbjct: 92  LCLWIYSSAYLTETWYGCVLAIPKGQWEASSSLGLKSWPQMRLIILPQAVRISVPPTVGI 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            + ++KN+SLA  VGF +L      I N T
Sbjct: 152 LVQVVKNTSLASIVGFVELTRASQMIANAT 181


>gi|150403150|ref|YP_001330444.1| polar amino acid ABC transporter inner membrane subunit
           [Methanococcus maripaludis C7]
 gi|150034180|gb|ABR66293.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C7]
          Length = 226

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 110/209 (52%), Gaps = 28/209 (13%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLIALKY 242
           KI VFS ++G+ L   L   R+S +   +        Y S+F I    G P LV I + Y
Sbjct: 30  KITVFSIIIGLFLGTILGMGRISYNILYR--------YFSSFYIEFVRGTPLLVQIMIIY 81

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P  G  N          + +  +AL   + A++ EI+++G+++V  GQMEAA +
Sbjct: 82  ---FGLPSFG-INL-------SAYTAGILALGLNSGAYVGEIIKAGILSVHVGQMEAARS 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL   +   +L  VG  I + T  
Sbjct: 131 LGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIAIVELTRVGKQIYSSTYN 190

Query: 363 A----IEIILIWMFIYLSLSIMIALFMNR 387
           A    + + L ++ + L LS ++    NR
Sbjct: 191 AWTPLLGVALFYLIMTLPLSKLVQHIENR 219


>gi|223933393|ref|ZP_03625380.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|302023343|ref|ZP_07248554.1| transport system membrane protein [Streptococcus suis 05HAS68]
 gi|330832144|ref|YP_004400969.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|223897960|gb|EEF64334.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|329306367|gb|AEB80783.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 223

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 13/167 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           L+ G+P +VL+   + ++F  P +G Q + I  S          IA +  ++A+I+EI+R
Sbjct: 67  LMRGIPLMVLL---FFIYFGLPFMGLQLDAISASI---------IAFTSMSSAYISEIIR 114

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           + L A+ +GQ EAA +LGL      R +++PQA R  +PPL++  L+++K++SL   +  
Sbjct: 115 ASLSAIDKGQWEAARSLGLRTNVIYRKIIIPQAFRIALPPLSNVLLDMVKSTSLTAMITV 174

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++ +    +       + + +    IY ++  + A    RL  ++A
Sbjct: 175 PEIFNKAKIVGGAKSDYMTVYICVALIYWAICTLYAFGQLRLEKRLA 221


>gi|240102153|ref|YP_002958461.1| ABC-type amino acid transport system, permease component
           [Thermococcus gammatolerans EJ3]
 gi|239909706|gb|ACS32597.1| ABC-type amino acid transport system, permease component
           [Thermococcus gammatolerans EJ3]
          Length = 189

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQF-NFIGGSTVS 263
           ++R +  +  +AL   YI   LI G P L+ +   Y + F  P++    F NF+   TV+
Sbjct: 1   MARTYGGRLSRALSATYIE--LIRGTPMLLQL---YIIGFGLPLVIRDHFPNFVMDPTVA 55

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  + +   +AA+ AE +R    ++  GQ+EAA++LG+T  +  R V+ PQA R +
Sbjct: 56  AA-----LGMVINSAAYQAEYIRGAFNSIEYGQVEAALSLGMTKWEIIRHVIFPQAFRIM 110

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P  T++ + LLK SSLA+ +   +L+       +QT    +I L+   IYL  + +I  
Sbjct: 111 LPSWTNEMVYLLKYSSLAMLLAVPELMYEASVAASQTFLYAQIYLVVAGIYLVFATLIIG 170

Query: 384 FMNRLNAKI 392
            M ++  K+
Sbjct: 171 IMRKVELKL 179


>gi|239908613|ref|YP_002955355.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239798480|dbj|BAH77469.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 266

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 25/153 (16%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKY-----QLHFDKP-VLGQFNFIGGSTVSPEFMSLYIA 272
           L  LY+  F   G P LV I + Y      +  D P V+G F                  
Sbjct: 97  LAALYVGAFR--GTPLLVQILIFYFCVGVVVRVDSPFVIGTFT----------------- 137

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS ++ A+I+E+VR+G+ +V  GQ EAA++ G+T  +A   V+LPQA R I+ P+T Q++
Sbjct: 138 LSLFSGAYISEMVRAGVESVDHGQWEAAMSSGMTRGQALLHVVLPQAARRIVAPVTGQFV 197

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           + +K+SSL   +   +L      +   T +  E
Sbjct: 198 SCIKDSSLLSVISLRELTKAAEVVNASTYRTFE 230


>gi|158321613|ref|YP_001514120.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158141812|gb|ABW20124.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 213

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 34/212 (16%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFAT--RLSR--------HFHEKTGKALPLLYISTFLIFGL 232
           M    +IF+ +  L I L L     RLS          F+    +  PLL    F+ FGL
Sbjct: 15  MFATIEIFIVTLCLSIPLGLVVALGRLSTVKIINRVIQFYILIMRGTPLLLQLVFVFFGL 74

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +                       G T+  +  +L +AL+   AA+ AEI R G+ ++
Sbjct: 75  PYV-----------------------GITLDRKTAAL-LALTLNYAAYFAEIFRGGIDSI 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ LG +  +  + ++LPQ  + ++P + ++ + L+K++SL   VG  +L+  
Sbjct: 111 NQGQYEAAMVLGFSKYRTIQRIILPQVFKVVLPSVGNEVITLVKDTSLVYVVGLGELLRA 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           G    N+    + ++ + M   + +SI+  +F
Sbjct: 171 GKIAANRDASLLPLVAVGMVYLILISILTEVF 202


>gi|159042876|ref|YP_001531670.1| glutamate/glutamine/aspartate/asparagine ABC transport system
           permease [Dinoroseobacter shibae DFL 12]
 gi|157910636|gb|ABV92069.1| glutamate/glutamine/aspartate/asparagine ABC transport system
           permease [Dinoroseobacter shibae DFL 12]
          Length = 432

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + +A+IAE +R GL A+PRGQ EA  +LGL + ++ RL++LPQA++  IP + + 
Sbjct: 302 IMITLFASAYIAEAIRGGLAALPRGQYEAGDSLGLDYWQSMRLIILPQALKISIPSIVNI 361

Query: 331 YLNLLKNSSLAVAVGFADLVS-VGGTIINQT 360
            + L K+++L   +   D++  + G I++ T
Sbjct: 362 AIGLFKDTTLVSIISMFDMLGMIQGPILSST 392


>gi|120612397|ref|YP_972075.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120590861|gb|ABM34301.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 266

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 2/123 (1%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L IA S  TAA +AE+ RSG++AVPRGQ +AA +LG+T  +    ++ PQA+R I+P 
Sbjct: 142 LTLPIAFS--TAAVVAEVYRSGVLAVPRGQTDAARSLGMTETQVFFAIVFPQALRYIVPA 199

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q + ++K+++    V + +L+     +I      + + LI   +Y  ++  I+    
Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQNARVLIANYHSLVPVYLIVAALYCLVNYAISRASR 259

Query: 387 RLN 389
           RL 
Sbjct: 260 RLG 262


>gi|300933044|ref|ZP_07148300.1| glutamate ABC transport system, permease protein [Corynebacterium
           resistens DSM 45100]
          Length = 228

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 7/183 (3%)

Query: 217 KALPLLYISTFLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGS-TVSPEFMSLYIALS 274
           +++   YI+T     L  +VL A L   ++ D  + GQ    G + T +  F    +A  
Sbjct: 50  RSIATFYINTVRNTPLTLIVLFASLGLYVNLDIALAGQ----GATFTTTNNFRLAVLAFV 105

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            YT++F+AE +RSG+  VP GQ EAA +LGL+  +  R ++ PQA+R  I PL +  + L
Sbjct: 106 LYTSSFVAESLRSGINTVPFGQAEAARSLGLSFFQNFRHIIFPQALRGAIVPLGNTLIAL 165

Query: 335 LKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            KN+++A  +G A+  + +  T+ N   Q   I  +    ++ L++ + L       ++A
Sbjct: 166 TKNTTIASVIGVAEASLLMKSTVENHANQVFVIFGVIALGFVILTLPMGLAFGAAGKRLA 225

Query: 394 LKE 396
           +K 
Sbjct: 226 VKR 228


>gi|239907741|ref|YP_002954482.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239797607|dbj|BAH76596.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 230

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 95/171 (55%), Gaps = 13/171 (7%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           Y+S F   G P +V +   Y  +F  P   +G F  +    +SP + ++ +  +  + A+
Sbjct: 59  YVSLFR--GTPLVVQL---YFWYFALPYVRIGDFALV----LSPMWAAI-VGFALCSGAY 108

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +E +R GL+++ RGQ+ AA ALG+T  ++   V+LPQA R  +P   ++ + L+K SSL
Sbjct: 109 QSEYIRGGLLSIKRGQLRAAQALGMTPFQSVTSVVLPQAFRRALPGCGNEIIYLIKYSSL 168

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A  +  +DL  +G ++   + +  E+ ++    YL+L + IA F+ ++  K
Sbjct: 169 ASIITVSDLTGMGRSLAKSSFRNTEVFIVVGLYYLAL-VTIASFLLKIAEK 218


>gi|239907739|ref|YP_002954480.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239797605|dbj|BAH76594.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 237

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 11/201 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVL 251
            FVLG+ L++    L  + H  T KA+   Y+  +L  G+P LV +   Y  +F     L
Sbjct: 36  GFVLGVPLAV----LHVYGHPLTRKAVAG-YV--WLFRGVPILVQL---YLFYFGIMAYL 85

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +   +    +S  F+S  I L   +AA+ ++I R  + ++P GQ++AA ALG++   A 
Sbjct: 86  SEIPALSFLPLSSGFLSAVIVLGLTSAAYQSQIFRGAMASLPAGQLKAARALGMSDAVAI 145

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA+R  IP  +++Y  LLK+S+LA  +G  ++++   ++   T Q + + ++  
Sbjct: 146 RSIILPQALRLAIPAWSNEYSILLKDSALAFTIGVLEVMARTRSVAATTHQPLPLSILAG 205

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            ++  L+      + RL AK+
Sbjct: 206 ALFFFLTWAGIKTLKRLEAKV 226


>gi|254250433|ref|ZP_04943752.1| phosphate ABC transporter, ATP-binding protein pstB [Burkholderia
           cenocepacia PC184]
 gi|124879567|gb|EAY66923.1| phosphate ABC transporter, ATP-binding protein pstB [Burkholderia
           cenocepacia PC184]
          Length = 604

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 7/147 (4%)

Query: 256 FIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           F+ G T   ++P FM+  + L+   AAF AE +R G+++V  GQ EAA ALGL   + T 
Sbjct: 157 FLRGPTTDLITP-FMAAILGLTLTQAAFAAEAIRGGILSVDHGQREAAAALGLPRARQTW 215

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---I 369
            ++LPQAMR+I+P   +  + L K +++   +   DL      I ++  + I +++   +
Sbjct: 216 RIVLPQAMRAILPAAFNDVIGLAKGTAVVYILAMPDLFYTVQIIYHRNLEVIPMLMVATV 275

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
           W  + L++   I + + R  A+ A ++
Sbjct: 276 WYLVILTVLSAIQVHIERHYARGATRD 302


>gi|89898982|ref|YP_521453.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343719|gb|ABD67922.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 214

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 1/133 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   SP  ++  I L+ Y +A++ EI R  + A+P+GQ EA+ +L L   +  R V+LPQ
Sbjct: 80  GMDTSP-LVAAAICLTLYASAYLTEIWRGCVNAIPKGQWEASTSLALNFTQQMRHVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+   I P     + ++K ++LA  +GF +L   G  I N T Q     +    +Y +L 
Sbjct: 139 ALHVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQMISNATYQPFLAYIFVGLLYFALC 198

Query: 379 IMIALFMNRLNAK 391
             ++ +  RL  +
Sbjct: 199 YPLSWWSQRLENR 211


>gi|83643770|ref|YP_432205.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83631813|gb|ABC27780.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 220

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 68/123 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+ AE+VR  ++AVP+GQ EAA+AL  T       ++LPQ++ ++IPP  + 
Sbjct: 88  IALGLNIGAYGAEVVRGSVLAVPKGQYEAAVALNFTPWSRLWRIILPQSLVNMIPPFGNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K +SL   +   DL     T+ + T Q  EI  + + IY  ++ ++A     L A
Sbjct: 148 AIELMKATSLVSLITIGDLTYKAKTLADATLQVGEIFGLVLLIYFVIAQVMAYLFRLLEA 207

Query: 391 KIA 393
           ++ 
Sbjct: 208 RLG 210


>gi|240122516|ref|ZP_04735472.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID332]
 gi|268681105|ref|ZP_06147967.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID332]
 gi|268621389|gb|EEZ53789.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID332]
          Length = 219

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+G++AVP+GQ+ A  A+GL+  +  R V LPQ     +P + +  
Sbjct: 92  ALVFLGASYMAEAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANI 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+   VG A+L+ V   +I    +  E + +    YL + + ++L   RL  +
Sbjct: 152 LFLMKETSVVSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRLENR 211

Query: 392 I 392
           I
Sbjct: 212 I 212


>gi|24379609|ref|NP_721564.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|290580391|ref|YP_003484783.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24377558|gb|AAN58870.1|AE014954_9 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|254997290|dbj|BAH87891.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 213

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 56/91 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLSQIQTVRYIILPQVVKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|312862890|ref|ZP_07723130.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|311101750|gb|EFQ59953.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
          Length = 213

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 57/91 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179


>gi|296102233|ref|YP_003612379.1| amino acid ABC transporter, inner membrane subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295056692|gb|ADF61430.1| amino acid ABC transporter, inner membrane subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 312

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 75/134 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTVRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL ++ +++  
Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLVITTVLSAI 265

Query: 385 MNRLNAKIALKEKK 398
              +   +A  E++
Sbjct: 266 QYGVERGLARSERR 279


>gi|291518712|emb|CBK73933.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 157

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 6/116 (5%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS     F +  +A     A + +EI R G+ ++P+GQ EAA  LGLT  +    ++L Q
Sbjct: 21  GSGDGGRFTAALVAFVFNYACYFSEIFRGGIQSIPKGQYEAAAVLGLTKTQTFFKIVLLQ 80

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            ++ I+PP++++ + L+K++SLA  + F +++  G   I   G      +IW   Y
Sbjct: 81  VVKRIVPPISNEVITLVKDTSLARVIAFYEIIWEGERFIKSAG------IIWPLFY 130


>gi|293603169|ref|ZP_06685602.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292818400|gb|EFF77448.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 219

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 74/126 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A+ +E  R+G+ ++ +GQMEAA+A+G++  +A   VL+PQA R I+P L S 
Sbjct: 94  VALVLNVSAYNSETFRAGINSIRKGQMEAALAMGMSRHQAMFKVLIPQAARRILPVLAST 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L K++SL   +  ++L      +  Q+ + +E++     IY  +    A  ++ ++ 
Sbjct: 154 WISLFKDTSLVSVIAVSELAYASMQVRAQSFRVLEMLTAMAVIYWLMGYPQAKLVDWIHR 213

Query: 391 KIALKE 396
           K  +KE
Sbjct: 214 KYGVKE 219


>gi|227875551|ref|ZP_03993691.1| permease protein of ABC superfamily ATP binding cassette
           transporter system [Mobiluncus mulieris ATCC 35243]
 gi|306818861|ref|ZP_07452583.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Mobiluncus mulieris ATCC 35239]
 gi|307700944|ref|ZP_07637969.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
 gi|227843887|gb|EEJ54056.1| permease protein of ABC superfamily ATP binding cassette
           transporter system [Mobiluncus mulieris ATCC 35243]
 gi|304648547|gb|EFM45850.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Mobiluncus mulieris ATCC 35239]
 gi|307613939|gb|EFN93183.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
          Length = 302

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 50/76 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A++AEIVR+GL +V  GQ EAA ALG+      R ++LPQAMR I+PP  ++
Sbjct: 146 LGLGLNEGAYLAEIVRAGLNSVDPGQWEAATALGMKRSLIMRRIILPQAMRVIVPPTGNE 205

Query: 331 YLNLLKNSSLAVAVGF 346
            +++LK +SL  A+ F
Sbjct: 206 TISMLKTTSLVSAIPF 221


>gi|182435041|ref|YP_001822760.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178463557|dbj|BAG18077.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 295

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 42/214 (19%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V S +LG VL++   RLS H          L ++ST L+     +P LV+I
Sbjct: 81  TLKAFAYAAVLSLLLGAVLAV--GRLSEHRV--------LRWLSTLLVEFFRAMPVLVMI 130

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                ALK Q                        +L   L+ Y  + +AE+ R+G+ +V 
Sbjct: 131 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINSVD 169

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA ALG+   + T  VL PQA+R+++P + SQ +  LK++SL   + + + +  G
Sbjct: 170 RGQREAAYALGMRKTQVTTFVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 229

Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384
             I +     +  I + M    IY+ + ++++ F
Sbjct: 230 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 263



 Score = 43.5 bits (101), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 36/51 (70%), Gaps = 1/51 (1%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           ++G ++  GRLS ++++ W+  + VE FR +P LV+IFF++ + L V P+P
Sbjct: 94  LLGAVLAVGRLSEHRVLRWLSTLLVEFFRAMPVLVMIFFIFVA-LKVQPLP 143


>gi|330900855|gb|EGH32274.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 277

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|317407718|gb|EFV87648.1| hypothetical protein HMPREF0005_03583 [Achromobacter xylosoxidans
           C54]
          Length = 217

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 69/118 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +   + L+    A+ AE+VR  + AVP GQ EA +AL LT  +  R +++PQA+ ++
Sbjct: 86  PAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALNLTRGQIMRRIVVPQAIPAM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +PP  +  + LLKN++L   +   DL   G  + ++T +  EI  + + +Y +++++I
Sbjct: 146 LPPAGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLMLLLYFAVALLI 203



 Score = 39.7 bits (91), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ A  +  + G GRLS  + V W+  +YVEVFR    LV +F+ 
Sbjct: 15  LLEGLAVTLEIMAGAVVLAVPLALVAGVGRLSTVRPVRWLASIYVEVFRGTSALVQLFWF 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|269956045|ref|YP_003325834.1| polar amino acid ABC transporter inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
 gi|269304726|gb|ACZ30276.1| polar amino acid ABC transporter, inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
          Length = 225

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 45/69 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y AAF+ E +RSG+  VP GQ EAA A+GL    A R+V+LPQA R  I PL + 
Sbjct: 98  VGLGVYHAAFVCESIRSGVNTVPVGQAEAARAIGLPFLAAARIVVLPQAFRGAIAPLGNT 157

Query: 331 YLNLLKNSS 339
            + LLKNS+
Sbjct: 158 LIALLKNST 166



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 97  FWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           FWL     F G + A  IGT++   R+S    + W   VYV+V RN P  V++ FL  +V
Sbjct: 17  FWLNIQLTFWGALVALAIGTVLAVMRISPLTSLRWAGTVYVDVIRNTPLTVIMTFLVLAV 76

Query: 153 LSVLPI 158
            + L +
Sbjct: 77  WTQLNV 82


>gi|323257342|gb|EGA41040.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
          Length = 199

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           + LP + +  F+ FG   L+L ++  + LH     +     I    VSP F+   IALS 
Sbjct: 16  RGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSL 74

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L LL
Sbjct: 75  LYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLL 134

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+++L   +   DL+    +I  +T +     +I   IYL ++++    + R++ +    
Sbjct: 135 KDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRF 194

Query: 396 EKK 398
           E++
Sbjct: 195 ERR 197


>gi|158424906|ref|YP_001526198.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331795|dbj|BAF89280.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 217

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 68/134 (50%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +S  + L+ Y + F+AEI R  + +VP+ Q EAA  L L+  +    V+LPQAMR  
Sbjct: 84  PAILSAGLGLTIYASGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRMTKVVLPQAMRIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
             P     + ++KN+SLA  VGF +L   G  + N   +   I ++   IY  L   ++ 
Sbjct: 144 TAPTVGFLVQIVKNTSLASVVGFIELSQAGKLVNNSIFEPFTIFIVVASIYFVLCYPLST 203

Query: 384 FMNRLNAKIALKEK 397
           +   L  K+ +  +
Sbjct: 204 WSRSLERKLNVGRR 217


>gi|84489758|ref|YP_447990.1| polar amino acid ABC transporter permease [Methanosphaera
           stadtmanae DSM 3091]
 gi|84373077|gb|ABC57347.1| predicted ABC-type polar amino acid transport system, permease
           protein [Methanosphaera stadtmanae DSM 3091]
          Length = 216

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 79/142 (55%), Gaps = 2/142 (1%)

Query: 252 GQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G +  +G ST S    +++ IA     AA+ AEI R G+ ++P+GQ EAA  LG T  + 
Sbjct: 72  GPYYILGVSTSSSYRLIAVLIAFIINYAAYFAEIFRGGIESIPKGQYEAAQILGYTKMET 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
             +++LPQ  + ++P +T++ + L+K++SL+  +   +L +V   +       + + +  
Sbjct: 132 FFIIILPQVFKIVLPSITNEVITLVKDTSLSFVLAIPELFTVAKQVAASEASILALFIAG 191

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
           +F Y+ L+ ++A  M  L  K+
Sbjct: 192 IFYYI-LNAIVAFIMELLEKKL 212



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP---PLV 143
           T ++ G + T  +    ++ A  +G +V  GR+S  K + WI R+Y+ V R  P    L+
Sbjct: 8   TELMGGLITTLEIFILTLLFAIPLGLVVAWGRMSKIKPIQWIMRIYISVMRGTPLMLQLI 67

Query: 144 VIFF 147
           V+FF
Sbjct: 68  VVFF 71


>gi|53720226|ref|YP_109212.1| amino acid ABC transporter permease [Burkholderia pseudomallei
           K96243]
 gi|76809380|ref|YP_334465.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|126441781|ref|YP_001060017.1| polar amino acid ABC transporter permease [Burkholderia
           pseudomallei 668]
 gi|134280168|ref|ZP_01766879.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 305]
 gi|167739770|ref|ZP_02412544.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 14]
 gi|167816990|ref|ZP_02448670.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 91]
 gi|167846892|ref|ZP_02472400.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei B7210]
 gi|167912120|ref|ZP_02499211.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 112]
 gi|254180992|ref|ZP_04887590.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254258358|ref|ZP_04949412.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|254298887|ref|ZP_04966337.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|288553017|ref|ZP_03452533.2| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 576]
 gi|52210640|emb|CAH36624.1| putative ABC-family amino acid transporter, permease component
           [Burkholderia pseudomallei K96243]
 gi|76578833|gb|ABA48308.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1710b]
 gi|126221274|gb|ABN84780.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 668]
 gi|134248175|gb|EBA48258.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 305]
 gi|157808749|gb|EDO85919.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|184211531|gb|EDU08574.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254217047|gb|EET06431.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|288279724|gb|EEC36457.2| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 576]
          Length = 219

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    IY  LS ++A    R+  + AL
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F +Y  
Sbjct: 17  GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                 +PD       G+ L+       TLT++  A
Sbjct: 77  ------LPD------IGISLDPTAAGIFTLTLNAGA 100


>gi|331702001|ref|YP_004398960.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329129344|gb|AEB73897.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 221

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 28/190 (14%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+L ++L LF T L++  H K        +IS   + G+P LVL+ + Y          
Sbjct: 39  SFILSLILGLFLT-LAQLSHHKLLHYPARAFIS--FMRGVPMLVLLFIIY---------- 85

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F F   +  +       IA +   +AF++E+ RS   AV  GQ EAA +LGL +RK   
Sbjct: 86  -FGFRADALPAA-----VIAFTINCSAFVSEVYRSSFSAVDHGQWEAAYSLGLPYRKVIS 139

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA----VAVGFADLVSVGGTIINQTGQAIEI-- 366
            ++ PQA R  IP L +  L+L K +SLA    V+  F D   V G   NQ    I I  
Sbjct: 140 KIVFPQAFRIAIPALGNILLDLFKGTSLAAMITVSEMFMDAQIVAGA--NQDYMTIYITI 197

Query: 367 -ILIWMFIYL 375
            ++ W F +L
Sbjct: 198 AVVYWFFCWL 207


>gi|257069404|ref|YP_003155659.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560222|gb|ACU86069.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 224

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 48/69 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS Y A+F+ E +RSG+  VP GQ EAA A+GL+   A R+++LPQA+R  + PL + 
Sbjct: 98  IALSLYHASFVCEAIRSGVNTVPLGQAEAARAIGLSFLPAARIIVLPQALRGAVTPLGNT 157

Query: 331 YLNLLKNSS 339
            + L KN++
Sbjct: 158 LIALTKNTT 166


>gi|188534833|ref|YP_001908630.1| Putative amino-acid transport system permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188029875|emb|CAO97759.1| Putative amino-acid transport system permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 227

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 14/201 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG+ L      L+R +  +  ++L   Y+  +LI G P LV + L +          
Sbjct: 30  AFTLGLSLGAVVA-LARLYGPRPLQSLVRFYV--WLIRGTPLLVQLFLIF---------- 76

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            +   G       F +  I  +    A+ +EI+R+ L++VP+GQ EAA ++G++  +  R
Sbjct: 77  -YALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEAAHSIGMSWSQTLR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +++PQA R  +PPL++ ++ L+K++SLA  +   +L      I   T Q + +      
Sbjct: 136 RIIMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAAI 195

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
           IYL LS +++    RL  K+A
Sbjct: 196 IYLLLSSVLSALQARLEKKLA 216


>gi|117620598|ref|YP_858703.1| amino-acid ABC transporter permease protein YckJ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117562005|gb|ABK38953.1| probable amino-acid ABC transporter permease protein YckJ
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 222

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 81/132 (61%), Gaps = 10/132 (7%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L +LYIS F   G P LV + L   L++  P L    F+G       F +  + L+ + A
Sbjct: 55  LAMLYISFFR--GTPLLVQLFL---LYYGLPQLFPI-FVGMDA----FTAAIVGLTLHFA 104

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AE +R+ +I + + QMEAA+++G++  +A + ++LPQA R   P L + +++++K++
Sbjct: 105 AYMAESIRASIIGIHKSQMEAALSIGMSRYQAMQRIILPQAARIATPSLMNYFIDMIKST 164

Query: 339 SLAVAVGFADLV 350
           SLA  +G A+++
Sbjct: 165 SLAFTLGVAEIM 176


>gi|114565875|ref|YP_753029.1| putative ABC transporter permease [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114336810|gb|ABI67658.1| putative ABC transporter permease protein [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 213

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 71/118 (60%), Gaps = 1/118 (0%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+ Y+A     +A++AEI R+G+ ++ RGQ EAA  LGL+  +    ++LPQ  + ++PP
Sbjct: 85  MAAYLAFVLNYSAYLAEIFRAGIQSIDRGQYEAADVLGLSRYQTMTNIILPQVFKRVLPP 144

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           + ++ +NL+K+++L   +  ++L  V  T + +    I  ++  +F YL ++ M+  F
Sbjct: 145 IGNEVINLVKDTALVYVLAISELSRVARTHVMRDDTFIPFLIAAIF-YLMMTGMVQRF 201


>gi|87120915|ref|ZP_01076807.1| ABC-type amino acid transport system, permease component
           [Marinomonas sp. MED121]
 gi|86163753|gb|EAQ65026.1| ABC-type amino acid transport system, permease component
           [Marinomonas sp. MED121]
          Length = 371

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 3/119 (2%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA  AEI+R+GL A+P GQ EA+ ALG+ + +   +V++PQ ++  IP + + ++ + K
Sbjct: 249 SAASKAEIIRAGLQAIPVGQFEASAALGVGYWRTMSMVIMPQVLKVSIPAMLNSFIGMFK 308

Query: 337 NSSLAVAVGFADLVSVGGTIIN--QTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL   +G  D +SVG   +N  + G+  IE+ +    IY  +   I+ F   L  ++
Sbjct: 309 DTSLVAIIGLLDFLSVGMATMNSDEWGKYGIEVYIFVAMIYFVILFTISRFSLTLEKQL 367


>gi|119387802|ref|YP_918836.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378377|gb|ABL73140.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 218

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 63/117 (53%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A++ EI R  + AVP GQ EAA AL L+++   R V+LPQAMR    P     + L+K 
Sbjct: 98  SAYLGEIWRGAIEAVPPGQTEAATALSLSYKDRMRHVVLPQAMRLATAPTVGFLVQLIKG 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +SLA  +GF +L   G  I N T +   +      +Y  L   ++L   R+ A++ L
Sbjct: 158 TSLASIIGFTELTRAGQIINNATFKPFLVFGTVAALYFVLCWPLSLLARRMEARMRL 214


>gi|317401750|gb|EFV82369.1| amino acid ABC transporter permease [Achromobacter xylosoxidans
           C54]
          Length = 218

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 69/129 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++   AL+ ++ AF+AEI R  + A+P+GQ EA+ +L L + +  R V+LPQA+R  
Sbjct: 84  PPWLAAGAALTLWSGAFLAEIWRGCVEAIPKGQWEASASLALGYVQQMRYVVLPQALRIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + P     + ++K+++L   +GF +L      I N T     +      IY +L   ++ 
Sbjct: 144 VAPTVGFAVQIVKSTALTSIIGFTELSKASTVITNATFSPFTVYACAALIYFALCWPLSR 203

Query: 384 FMNRLNAKI 392
              RL  K+
Sbjct: 204 LSLRLERKL 212


>gi|259909372|ref|YP_002649728.1| Putative amino acid ABC transporter, permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|224964994|emb|CAX56522.1| Putative amino acid ABC transporter, permease protein [Erwinia
           pyrifoliae Ep1/96]
          Length = 218

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+CYT+AF+ +I    + A+P+GQ EA   LGL+  +    V+LPQ
Sbjct: 80  GIDLSP-WAAAALALTCYTSAFLVDIWYGSIKALPKGQWEACRCLGLSSGQTLFRVVLPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 ALRVAIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 186


>gi|153011069|ref|YP_001372283.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562957|gb|ABS16454.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 222

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 84/153 (54%), Gaps = 7/153 (4%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           P  ++I    ++  + P L Q  FI       G  +SP   +L +AL     A+  EI+R
Sbjct: 51  PVRLIIDAYIEIIRNTPFLVQIFFIFFGLPSAGLRLSPNSAAL-LALVVNFGAYGTEIIR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ +GQ+EA  ALGL+  +  R V++  A+R++ P LTSQ++ L+  SS+   +  
Sbjct: 110 AGIESIHKGQVEAGTALGLSKLQVFRYVIMKPALRTVYPSLTSQFIYLMLTSSVVSVISA 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            +L + G  + + T  + E+ ++   +YL +SI
Sbjct: 170 NELAAAGNDLQSATFASFEVYIVITLMYLVMSI 202



 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  L+ + M+   I+  +   G+ S  K V  I   Y+E+ RN P LV IFF+
Sbjct: 16  LLVGAWQTIELSCAAMVLGLIVSIVCALGKTSGPKPVRLIIDAYIEIIRNTPFLVQIFFI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|53725952|ref|YP_103705.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia mallei
           ATCC 23344]
 gi|67643969|ref|ZP_00442712.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei GB8 horse 4]
 gi|121601039|ref|YP_992121.1| polar amino acid ABC transporter permease [Burkholderia mallei
           SAVP1]
 gi|124386639|ref|YP_001028567.1| polar amino acid ABC transporter permease [Burkholderia mallei NCTC
           10229]
 gi|126450004|ref|YP_001081536.1| polar amino acid ABC transporter permease [Burkholderia mallei NCTC
           10247]
 gi|166998336|ref|ZP_02264196.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei PRL-20]
 gi|254175602|ref|ZP_04882262.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|254202403|ref|ZP_04908766.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei FMH]
 gi|254207734|ref|ZP_04914084.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei JHU]
 gi|254356366|ref|ZP_04972642.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei 2002721280]
 gi|52429375|gb|AAU49968.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei ATCC 23344]
 gi|121229849|gb|ABM52367.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei SAVP1]
 gi|124294659|gb|ABN03928.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei NCTC 10229]
 gi|126242874|gb|ABO05967.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei NCTC 10247]
 gi|147746650|gb|EDK53727.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei FMH]
 gi|147751628|gb|EDK58695.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei JHU]
 gi|148025363|gb|EDK83517.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei 2002721280]
 gi|160696646|gb|EDP86616.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|238525444|gb|EEP88872.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei GB8 horse 4]
 gi|243065405|gb|EES47591.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei PRL-20]
          Length = 219

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSENMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    IY  LS ++A    R+  + AL
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F +Y  
Sbjct: 17  GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                 +PD       G+ L+       TLT++  A
Sbjct: 77  ------LPD------IGISLDPTAAGIFTLTLNAGA 100


>gi|330951075|gb|EGH51335.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 277

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|302531068|ref|ZP_07283410.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
 gi|302439963|gb|EFL11779.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
          Length = 246

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 75/122 (61%), Gaps = 5/122 (4%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI R+G+ +V +GQ+EA+ ALG+++ KA  LV++PQ +R ++P L +Q++ L+K+S+
Sbjct: 112 YIGEIFRAGIQSVDKGQLEASRALGMSYTKAMLLVVIPQGVRRVLPALVNQFIALVKDST 171

Query: 340 LAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +GF     +L  +G  +   TG    ++   + +YL +++ +   +N ++ ++   
Sbjct: 172 LVYFLGFLTSQRELFRIGQDLAANTGNLSPLVAAGV-VYLVITVPLTHLVNYIDKRLQTG 230

Query: 396 EK 397
            K
Sbjct: 231 RK 232



 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 34/61 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +NT  L+ +  I  T++G ++    LS  + + W  RVY ++FR +P ++ I  + + 
Sbjct: 25  GLLNTLILSVAAAIIGTLLGMVLAVMGLSTKRWLRWPARVYTDIFRGLPAILTILVIGQG 84

Query: 152 V 152
           V
Sbjct: 85  V 85


>gi|312278252|gb|ADQ62909.1| Amino acid (Glutamine) ABC transporter, permease protein
           [Streptococcus thermophilus ND03]
          Length = 213

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 57/91 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179


>gi|170735289|ref|YP_001774403.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169821327|gb|ACA95908.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 225

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 4/128 (3%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y  T  + G+P  +++ + Y   F    L    F G   +SP F +  IAL+    A+ +
Sbjct: 52  YALTNFLRGIPEFLILLICY---FGLSHLLNAQFDGAIVISP-FSAGVIALAVVFGAYAS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R   IAVP GQ+EAA A G++  +    V LPQA R  +P L + + NLLK++SL  
Sbjct: 108 EMFRGAFIAVPAGQIEAARAYGMSRLQTLWHVRLPQAWRICLPSLNNMWQNLLKDTSLVS 167

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 168 IVGLEDML 175


>gi|62185155|ref|YP_219940.1| ABC transporter, membrane permease [Chlamydophila abortus S26/3]
 gi|62148222|emb|CAH63981.1| ABC transporter, membrane permease [Chlamydophila abortus S26/3]
          Length = 215

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 18/189 (9%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG+++    T  SR+F  +  + L  LY++  +I G P  + I + Y   F  P + + +
Sbjct: 32  LGVII---GTMTSRYFPCRITRCLGNLYVT--VIRGTPLFIQILIFY---FGLPSIIRLD 83

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                      M+  IALS  ++A++AE +R G+ A+  GQ E+A  LG    +    ++
Sbjct: 84  -------PTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFYII 136

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQ  ++I+P LT++++ L+K SS+ + VG  +L  V   I+++    +E+  I   +YL
Sbjct: 137 YPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYL 196

Query: 376 SLSIMIALF 384
              +M +LF
Sbjct: 197 ---LMTSLF 202


>gi|309776367|ref|ZP_07671354.1| arginine transport system permease protein ArtQ
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915886|gb|EFP61639.1| arginine transport system permease protein ArtQ
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 217

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S  + A+++EI+R+G+  + +GQ+EAA ALG++     + +++PQA R+++P + ++
Sbjct: 93  LVFSLNSGAYMSEIMRAGIDGIDKGQIEAAKALGVSGTDIAKDIIIPQAFRNVLPAVINE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L K +S+   +G  D++     + NQT    E +LI   +Y  ++ +++L    +  
Sbjct: 153 FITLTKETSIVSVLGLHDMMYWFYAVKNQTYADFEPLLIVFLVYYIMNKILSLIGKMIER 212

Query: 391 KI 392
           K+
Sbjct: 213 KL 214


>gi|152970451|ref|YP_001335560.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150955300|gb|ABR77330.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 308

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 76/134 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL+++ +++  
Sbjct: 206 PSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAI 265

Query: 385 MNRLNAKIALKEKK 398
              +   +A  E++
Sbjct: 266 QYLVERGLARSERR 279


>gi|302188038|ref|ZP_07264711.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. syringae 642]
          Length = 215

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L   TAA +AEI R  L+A+P GQ EA+  LGL  R     V++PQ  R  +P
Sbjct: 83  FVAAMLGLGLITAANLAEIYRGALLAIPHGQREASHVLGLGFRDRAMSVMVPQVFRYSLP 142

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             ++  + LLK++++A  +G  ++  V   +  QT + +EI  +   +YL +S  +A   
Sbjct: 143 ACSTYAIGLLKDTAIASTIGVPEVAQVAYQLSQQTFKGLEIYALAGCLYLLVSFAMAWLS 202

Query: 386 NRLNAKIALKEKK 398
             ++A +  + ++
Sbjct: 203 RTVDANLRARIER 215


>gi|283479444|emb|CAY75360.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 225

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+CYT+AF+ +I    + A+P+GQ EA   LGL+  +    V+LPQ
Sbjct: 87  GIDLSP-WAAAALALTCYTSAFLVDIWYGSIKALPKGQWEACRCLGLSSGQTLFRVVLPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 146 ALRVAIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 193


>gi|163795108|ref|ZP_02189076.1| polar amino acid uptake family ABC transporter, permease protein
           [alpha proteobacterium BAL199]
 gi|159179506|gb|EDP64035.1| polar amino acid uptake family ABC transporter, permease protein
           [alpha proteobacterium BAL199]
          Length = 239

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++LS +  AF  EI RSG+ AVP    EAA ALG    +A   ++LP A R  +P L + 
Sbjct: 111 VSLSFFAGAFNVEIFRSGIEAVPESTREAAEALGYNRLQAYLYIVLPLAFRVCLPALNNN 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+K ++LA A+   +L+ V   I + +    E+++  + +Y++L  ++   M+R   
Sbjct: 171 LVNLVKTTTLAYAIAVPELLYVSNQIWSDSVNVPEMMVTLLVLYVALVGLLVWGMHRWER 230

Query: 391 KI 392
            I
Sbjct: 231 AI 232



 Score = 43.5 bits (101), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 6/82 (7%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV---YVEV 135
           Y  DS     ++ GF  T WL+   +  +TIIG +VGA  L  ++ V W  R+   Y+++
Sbjct: 12  YFYDSFDRARMIGGFFMTIWLSLVCLFFSTIIG-VVGAW-LQGSRFV-WTRRIAQGYIQL 68

Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157
           FRN PPLV ++F + ++ ++LP
Sbjct: 69  FRNTPPLVQMYFFFFALGNLLP 90


>gi|71737879|ref|YP_273293.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482032|ref|ZP_05636073.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|71558432|gb|AAZ37643.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320325714|gb|EFW81775.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327367|gb|EFW83381.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330881565|gb|EGH15714.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330887840|gb|EGH20501.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|331008890|gb|EGH88946.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 277

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|317053173|ref|YP_004119527.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953500|gb|ADU72971.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 229

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 70/123 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I++    AA++ EI+RSGL +V   Q EAA+ L  ++ +  R V++PQ++  +IPP  S 
Sbjct: 102 ISVCIIAAAYLGEIIRSGLESVHHNQWEAAVTLNFSYLQTLRYVIIPQSLTVVIPPTFSF 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K+++LA  +G  +L S    + ++   A  +  + + +Y  +S  ++    RL  
Sbjct: 162 FVMYIKDTTLASQIGVMELTSASKILSDKGYSATLVYAVVLMLYFIVSYPLSRLGKRLER 221

Query: 391 KIA 393
           KIA
Sbjct: 222 KIA 224


>gi|257387739|ref|YP_003177512.1| polar amino acid ABC transporter inner membrane subunit
           [Halomicrobium mukohataei DSM 12286]
 gi|257170046|gb|ACV47805.1| polar amino acid ABC transporter, inner membrane subunit
           [Halomicrobium mukohataei DSM 12286]
          Length = 238

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 73/121 (60%), Gaps = 3/121 (2%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+ +++ R  + ++  GQME A ++G++  +A R V+ PQA+R  IP   +++  +LK
Sbjct: 113 SGAYQSQVFRGAIQSISEGQMEGARSIGMSKLQAIRHVIFPQAIRRSIPGFQNEFTIVLK 172

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++S+A A+G A+L++    +  Q G+    +E+IL    IY  L++     ++RL+ + A
Sbjct: 173 DTSVAFAIGLAELLTRAENLYLQPGRGTAVMEVILTITAIYFVLTVATNRTLDRLHDRYA 232

Query: 394 L 394
           +
Sbjct: 233 I 233


>gi|254438844|ref|ZP_05052338.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198254290|gb|EDY78604.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 790

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 9/115 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + AA+IAE++R GL A+  GQ E A +LGL++ ++ +L++LPQAM+  IP + + 
Sbjct: 661 IMVTLFAAAYIAEVIRGGLAALATGQYEGADSLGLSYWQSMQLIVLPQAMKISIPGIVNT 720

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI-ALF 384
           ++ L K++ L V +G +D +     I   T         W  IY  L + I ALF
Sbjct: 721 FIGLFKDTVLVVFIGLSDPIGFSNLIRADTD--------WNGIYWELFVFIGALF 767


>gi|169334791|ref|ZP_02861984.1| hypothetical protein ANASTE_01197 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257529|gb|EDS71495.1| hypothetical protein ANASTE_01197 [Anaerofustis stercorihominis DSM
           17244]
          Length = 222

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 21/204 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL-IALKYQLHFDKP 249
           +FS V+GI  S    +    F+    +  PLL    F+ FGLP L+    + ++L     
Sbjct: 37  LFSCVMGIS-SFKPFKAISKFYLWLIRGTPLLVQCFFVYFGLPQLIQSFGIDFRLT---- 91

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                           + +  I LS    A+++EI R G+ AV +GQMEAA +LGL   +
Sbjct: 92  ---------------AYSAGIITLSLNAGAYMSEIFRGGIQAVDKGQMEAARSLGLPKGR 136

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A   V+LPQA++  IP L +Q++  LK++S+   +  A++V      I +T  +     +
Sbjct: 137 AMIKVILPQALKICIPSLVNQFIITLKDTSIISTISLAEVVYAANIYIGRTMNSFATWTL 196

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              +YL +  +++   N +  +I+
Sbjct: 197 VGLMYLVVVTLLSSLSNYIERRIS 220


>gi|187919547|ref|YP_001888578.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717985|gb|ACD19208.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 216

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 1/125 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP   +L  A+S  +A++IAEI+R G ++VP G +EAA  LGL+     R +L+PQ
Sbjct: 81  GINVSPIVAALS-AVSLCSASYIAEILRGGFLSVPPGHLEAARMLGLSPFDMLRRILVPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +P L ++ + L+K SSL   VG A+L      I   T + +E  +    IY  + 
Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVIC 199

Query: 379 IMIAL 383
             +AL
Sbjct: 200 GALAL 204


>gi|322516947|ref|ZP_08069840.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
 gi|322124492|gb|EFX95983.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 213

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 57/91 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179


>gi|327395224|dbj|BAK12646.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Pantoea ananatis AJ13355]
          Length = 308

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 75/129 (58%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+   AA+ AEI+R G + V  GQ+EAA ALGL+  + T  ++LPQA+R+II
Sbjct: 146 QFPAAVIGLTLVQAAYSAEIIRGGFLGVDHGQVEAASALGLSASRRTFRIILPQALRAII 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+  + I ++++    YL ++ ++++ 
Sbjct: 206 PTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 265

Query: 385 MNRLNAKIA 393
            + +   +A
Sbjct: 266 QHSVERWLA 274


>gi|295699404|ref|YP_003607297.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438617|gb|ADG17786.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 257

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 70/123 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+S    A+  EIVR+G+ ++ RGQ++AA ALGL  R+  R V+LPQA+ ++ 
Sbjct: 89  EVQAAILAMSVNLGAYATEIVRAGIDSISRGQVQAAQALGLQGRQVFRYVVLPQALANVF 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L  Q L ++  S++   +   DL      I ++  ++ E  +I    YL +SI++   
Sbjct: 149 PALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITATYLLMSIVLRQL 208

Query: 385 MNR 387
           +NR
Sbjct: 209 LNR 211


>gi|27377336|ref|NP_768865.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27350480|dbj|BAC47490.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 217

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 11/168 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P +VL+   + L+F  P LG    +  S +    + L IA S Y A    E  R+
Sbjct: 61  VIRGIPIIVLL---FYLYFVMPDLG----VTLSALQAAILGLGIAYSAYQA----ENFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+ +GQ+EAA ++G+      R V+LPQA+R ++PP  +  + +LK+SS A  +  A
Sbjct: 110 GIEAIDKGQIEAAQSIGMGWWLTMRRVVLPQAVRIVLPPYGNVMIMMLKDSSQASTITVA 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L   G  I + T +   +  +   +YL++SI + L +     +   K
Sbjct: 170 ELALQGKLIASSTFKNTSVFTLVALMYLTMSIPLILLVRHFEKRAGKK 217


>gi|53729251|ref|ZP_00133781.2| COG0765: ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209068|ref|YP_001054293.1| amino acid ABC transporter permease [Actinobacillus
           pleuropneumoniae L20]
 gi|126097860|gb|ABN74688.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
          Length = 227

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 25/211 (11%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 31  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 84

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 85  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI- 366
            +  R ++ PQA+R +IPPL++ ++ L K++SLA  V   ++  V   + N +   + + 
Sbjct: 137 MQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 196

Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAKIA 393
               ++ W F ++ L ++ A    R N  +A
Sbjct: 197 IEAGLIYWCFCWV-LFLIQAKLERRFNCFVA 226


>gi|207722317|ref|YP_002252753.1| hypothetical protein RSMK04914 [Ralstonia solanacearum MolK2]
 gi|206587494|emb|CAQ18076.1| hypothetical protein RSMK04914 [Ralstonia solanacearum MolK2]
          Length = 143

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 62/106 (58%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y  AF +E +R+G+ AVP GQ+ AA++LG T   A   ++LPQA+R    PL  Q  N L
Sbjct: 10  YAGAFCSEELRAGIRAVPHGQLNAALSLGFTPHAAFVRIVLPQALRVAALPLLGQCANTL 69

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           KN+SLA+ +G A+L      +   +  A +   +   +Y ++++++
Sbjct: 70  KNTSLAMGIGLAELSYSARQVETDSLLAFQAFAVATLLYAAVTLLL 115


>gi|172062269|ref|YP_001809920.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171994786|gb|ACB65704.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 223

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 66/112 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     AF AE  R+G+ AVP+  ++AA+ALGL   + T  V+LPQA+R+ +P L + 
Sbjct: 96  LALGLNLTAFNAEAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRTAMPVLLTN 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +  L+ S+L   V  ADL+ V  +I  +  + +E   +   +Y +LS+ IA
Sbjct: 156 GIGSLQQSALVAIVAVADLMYVAKSIATEAYRPLETYSVVALVYFALSLPIA 207


>gi|330988581|gb|EGH86684.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 277

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|307129013|ref|YP_003881029.1| putative transporter membrane protein [Dickeya dadantii 3937]
 gi|306526542|gb|ADM96472.1| predicted transporter subunit: membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 221

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 14/199 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SFVLG+++ +    L R +     K +   Y+  ++I G P LV + L +        
Sbjct: 28  ILSFVLGLMIGVLVALL-RLYGPTPLKKICDFYV--WMIRGTPLLVQLFLIF-------- 76

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              +           F +  I  S    A+ +EIVR  +++VP+GQ  AA +LG++  +A
Sbjct: 77  ---YGLPNAGITLDAFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWNAAYSLGMSGAQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V++PQ++   +PPL + +++L+K++SLA  +   ++      I++ T + + + +  
Sbjct: 134 IRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYIEA 193

Query: 371 MFIYLSLSIMIALFMNRLN 389
             IYL  S +++    RL 
Sbjct: 194 ALIYLLFSTVLSKLQTRLE 212


>gi|160894911|ref|ZP_02075685.1| hypothetical protein CLOL250_02461 [Clostridium sp. L2-50]
 gi|156863342|gb|EDO56773.1| hypothetical protein CLOL250_02461 [Clostridium sp. L2-50]
          Length = 243

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 75/122 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+RSG+++V  GQME   A+GL+     R +++PQA+++I+P L +++++L+K
Sbjct: 121 SGAYISEIMRSGILSVDPGQMEGGRAMGLSFATTMRKIVIPQAVKNILPTLGNEFISLIK 180

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG  DL      I + + + +   L+   IY+ + ++I+L +  +   +   +
Sbjct: 181 ETSVVSFVGATDLYVAFNYIGSNSYEFMIPYLVMALIYIVMVLLISLGIKLMERSLRKSD 240

Query: 397 KK 398
           ++
Sbjct: 241 RR 242


>gi|319441563|ref|ZP_07990719.1| glutamate ABC transport system, permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 229

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 9/140 (6%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   F    +A   YT+ F+AE +RSG+  +P GQ EAA +LGLT  +  R V+ PQA+R
Sbjct: 94  VDQNFRLAVVAFVAYTSTFVAESLRSGINTIPFGQAEAARSLGLTFMQNFRYVIFPQALR 153

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             I PL +  + L KN+++A  +G ++   +  T+       I    +W+F  +++  MI
Sbjct: 154 GSIVPLGNTLIALTKNTTIASVIGVSEASLLMKTMTENYASDI----LWIFGIIAVGFMI 209

Query: 382 -----ALFMNRLNAKIALKE 396
                 LF      + A+K 
Sbjct: 210 LTLPTGLFFGWAGKRWAVKR 229


>gi|256848427|ref|ZP_05553869.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256714694|gb|EEU29673.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 231

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 55/86 (63%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+ +E +R+ + ++PR Q EAA ++G+T+++    ++ PQA R  IPPL++ ++ L+K
Sbjct: 107 TGAYASETIRAAISSIPRSQWEAAYSIGMTYQQVLFKIIFPQAFRIAIPPLSNSFIGLVK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQ 362
           ++SLA  +  AD+  V   I +   Q
Sbjct: 167 DTSLASTITIADMFLVSQQIASHNYQ 192


>gi|255994314|ref|ZP_05427449.1| glutamine ABC transporter, permease protein [Eubacterium saphenum
           ATCC 49989]
 gi|255993027|gb|EEU03116.1| glutamine ABC transporter, permease protein [Eubacterium saphenum
           ATCC 49989]
          Length = 224

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 70/122 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AE++R GL +V  GQMEAA +LG++   A RL+++PQA + I+P L ++++ L+K
Sbjct: 102 SAAYVAEVIRGGLQSVDHGQMEAASSLGMSKFMALRLIIIPQAFKIIMPSLGNEFITLIK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+    G  +++  G    +      E        Y+ L+I ++  +  +  ++   E
Sbjct: 162 ETSVLAFCGVPEILRQGELWASSNFNTFEAYTGVALAYMCLTIPLSRIVKLIEKRMKRNE 221

Query: 397 KK 398
           +K
Sbjct: 222 RK 223


>gi|209552184|ref|YP_002284100.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539777|gb|ACI59708.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 217

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 16/194 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F LG +L+L     +R       +A    +IS  ++ G+P +  +   + + +  P 
Sbjct: 23  VTCFALGAILAL-PVSFARLSENGFARAFASTFIS--VVRGVPPITWL---FLIFYGLPQ 76

Query: 251 LG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           LG +F+ +  + V          L+    A+IAE  RSG +A+P GQ+EAA ALGLT   
Sbjct: 77  LGLKFSSLSAAVVG---------LTMMCTAYIAEFYRSGWLAMPAGQIEAAKALGLTEFA 127

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+ PQ    ++P   + ++ LLKNS++   +G +D+     +          + + 
Sbjct: 128 AFRKVIAPQVFVIVLPMAITYFIALLKNSAVVSVIGVSDVTDRALSESRSAPDPFNVFIA 187

Query: 370 WMFIYLSLSIMIAL 383
             F+Y+++S+ I L
Sbjct: 188 AGFVYMAVSVPIGL 201


>gi|58337932|ref|YP_194517.1| amino acid ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227902900|ref|ZP_04020705.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
 gi|58255249|gb|AAV43486.1| amino acid ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227869316|gb|EEJ76737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
          Length = 215

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 1/128 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P + +   A     AA+ AEI R G  ++  GQ EAA  L LT  +    +++PQ ++
Sbjct: 82  VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLTRFQTMTKIIIPQVIK 141

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P + ++ +NL+K+SSL   +G  DL+  G   + +    + ++L+ + IYL L  + 
Sbjct: 142 IVLPSIGNEVINLIKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGI-IYLLLISIC 200

Query: 382 ALFMNRLN 389
           A  M +L 
Sbjct: 201 AFVMKKLE 208


>gi|83748011|ref|ZP_00945041.1| Transporter [Ralstonia solanacearum UW551]
 gi|207738691|ref|YP_002257084.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725313|gb|EAP72461.1| Transporter [Ralstonia solanacearum UW551]
 gi|206592059|emb|CAQ58965.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 230

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 15/170 (8%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            RLSR+   +  + + + ++S   I G P L+ + L Y  +   P+LG        ++SP
Sbjct: 50  ARLSRY---RLLRGMVMAWVSA--IRGTPALIHLLLAY--YVVPPLLGL-------SISP 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
               +  AL+C T+A++ EI+R  L +VP  Q  AA ALG+   +  R VLLPQ     I
Sbjct: 96  LTAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAI 154

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           PPLTS++  LLK SSL   +   +L +V      Q+   +++  +   +Y
Sbjct: 155 PPLTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQVFAMTAAVY 204


>gi|284009201|emb|CBA76271.1| amino acid ABC transporter, permease protein [Arsenophonus
           nasoniae]
          Length = 244

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 58/86 (67%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   +A++A  V++G++A+ +GQ +A ++LG T       ++LPQA+R +
Sbjct: 94  PELTTVICALALIASAYLAHGVKAGILAIGQGQWQAGMSLGFTRWAVLWHIILPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           +P   +Q++ L+K++SLA  VG A+L
Sbjct: 154 LPSFINQWIALIKDTSLAYIVGVAEL 179


>gi|227504863|ref|ZP_03934912.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium striatum ATCC 6940]
 gi|227198554|gb|EEI78602.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium striatum ATCC 6940]
          Length = 228

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 75/122 (61%), Gaps = 1/122 (0%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE +RSG+  V  GQ EAA +LGL+  +    ++ PQA+R+ I PL +  + L 
Sbjct: 107 YTSAFVAESLRSGINTVDFGQAEAARSLGLSFTQTFSTIVFPQAVRAAIVPLGNTLIALT 166

Query: 336 KNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           KN+++A  +G A+  + +  TI     Q   I LI+   ++ L++ + L + +L+ K+A+
Sbjct: 167 KNTTIASVIGVAEASLLMKSTIEFHASQLFVIFLIFAAGFIILTLPMGLGLGKLSEKLAV 226

Query: 395 KE 396
           K+
Sbjct: 227 KK 228


>gi|315222682|ref|ZP_07864571.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315188368|gb|EFU22094.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 268

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 56/91 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G++++P GQ EAA  L  T  +  R ++LPQ ++ ++P + ++
Sbjct: 144 IAFTLNYAAYFAEIFRGGILSIPAGQYEAAKVLKFTPFQTIRFIILPQVVKVVLPSVFNE 203

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            + L+K++SL  A+G +DL+    T  N+  
Sbjct: 204 VMTLVKDTSLVYALGVSDLILASRTAANRDA 234


>gi|73537533|ref|YP_297900.1| glutamine ABC transporter permease protein [Ralstonia eutropha
           JMP134]
 gi|72120870|gb|AAZ63056.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 218

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 56/90 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR   ++VPRG  EA +ALGL   +    V+ P A+R + PPL +Q++  LK
Sbjct: 100 SGAYIAEIVRGAFLSVPRGLREAGLALGLPPWRVLAFVVGPVALRRMTPPLGNQFIVSLK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++SL + +G  +L   G  ++    +A+EI
Sbjct: 160 DTSLFIVIGVGELTRQGQEVMAANFRAVEI 189


>gi|330816514|ref|YP_004360219.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327368907|gb|AEA60263.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 259

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 27/173 (15%)

Query: 191 VFSFVLGI----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           VFS +LGI    VL+L A   +R            +Y+  F   GLP  ++I        
Sbjct: 34  VFSTLLGILAGMVLALMAVSPTRWLTTPA-----RIYVDVFR--GLPAALVIL------- 79

Query: 247 DKPVLGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              V+GQ    +G +   P    L I AL+  ++A+IAEI RSG+ +V RGQ+ A  ALG
Sbjct: 80  ---VVGQGLAPVGLALFGPNPYPLAIVALALISSAYIAEIFRSGIQSVGRGQLYACQALG 136

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVG 353
           +++  + R V++PQ +R I+P L +Q+++++K+SSL   +G      DL ++G
Sbjct: 137 MSYWSSMRHVIVPQGIRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIG 189


>gi|325576597|ref|ZP_08147315.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161160|gb|EGC73275.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 238

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 75/131 (57%), Gaps = 6/131 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ ++A+P+GQ EA+ A+G+ + +A    ++PQA+   +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASILAIPKGQWEASYAIGMNYTQAFVRTIMPQALHISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIA 382
            L++ +++ +K++SLA  V  A+L  V     N T +  E ILI+     IY     +++
Sbjct: 168 SLSNTFISTVKDTSLASLVWIAELFRVAQ---NITAENYEFILIYSEAALIYWVFCFVLS 224

Query: 383 LFMNRLNAKIA 393
           +   RL  +++
Sbjct: 225 IGQTRLEKRLS 235


>gi|302868069|ref|YP_003836706.1| polar amino acid ABC transporter inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315505534|ref|YP_004084421.1| polar amino acid abc transporter, inner membrane subunit
           [Micromonospora sp. L5]
 gi|302570928|gb|ADL47130.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315412153|gb|ADU10270.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora sp. L5]
          Length = 256

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 5/126 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   AA++ EI R+G+++V   Q+E A ALG +  +A RLV++PQ +R ++P   +Q
Sbjct: 106 LALSLIAAAYLGEIFRAGILSVEAAQLEGARALGFSWGEAMRLVIIPQGVRRVLPAWVNQ 165

Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L+K+SSL   +G      +L  +G      TG    ++L  +F YL L++ +   +N
Sbjct: 166 LIALIKDSSLVYFLGLLASQRELFRIGQDYAANTGNQSALLLAGLF-YLVLTVPLTHAVN 224

Query: 387 RLNAKI 392
            L+ ++
Sbjct: 225 WLDRRL 230



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 30/58 (51%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           VG  NT  LA S  +  +++G L+    +S  + + W  RVY +VFR +P    I  +
Sbjct: 27  VGLPNTLTLAVSAALLGSVLGMLLAVAGISRTRWLRWPARVYTDVFRGLPAAATILLI 84


>gi|83952546|ref|ZP_00961277.1| ABC polar amino acid transporter, inner membrane subunit
           [Roseovarius nubinhibens ISM]
 gi|83836219|gb|EAP75517.1| ABC polar amino acid transporter, inner membrane subunit
           [Roseovarius nubinhibens ISM]
          Length = 232

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 60/98 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FM L++ L+   AAF  EI+ +G+ +V +GQ EAA + GL   +    V+LPQAMR  IP
Sbjct: 102 FMVLFVVLTLILAAFAEEILWAGITSVDKGQWEAARSTGLGFTQTLGYVILPQAMRLAIP 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           PLT++ + + K ++L   +G  D+++   T  + +G A
Sbjct: 162 PLTNRAIAITKMTALGTVIGVPDILNQATTAQSFSGNA 199



 Score = 36.2 bits (82), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA +IL G   T WL+   ++    +GTL+   R      ++++  V+ +VFR +PPLVV
Sbjct: 25  YAPSILAGVGVTVWLSVLIILVGMTLGTLLACLRAYRVGPLSFLIVVFADVFRALPPLVV 84

Query: 145 IFFLY 149
           I  ++
Sbjct: 85  ILLVF 89


>gi|319948859|ref|ZP_08022972.1| ABC amino acid transporter, permease component [Dietzia cinnamea
           P4]
 gi|319437461|gb|EFV92468.1| ABC amino acid transporter, permease component [Dietzia cinnamea
           P4]
          Length = 243

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 1/131 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P F  + +AL     A+ AE+VR  L AVP  Q EAA+AL  T  +    ++ PQ
Sbjct: 82  GYELDPLFCGI-LALGLNYGAYAAEVVRGSLAAVPAPQWEAALALNFTSWQRLYRIVFPQ 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A   +IPPL +  + LLK S+LA  +   DL    G +   TG  +    I + +Y  ++
Sbjct: 141 AWVQMIPPLNNLLIQLLKGSALASFILLQDLTFHIGELRRVTGDTVFAFGIGLVLYFLIA 200

Query: 379 IMIALFMNRLN 389
            ++ LFMN L 
Sbjct: 201 YVLTLFMNMLE 211


>gi|326775557|ref|ZP_08234822.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326655890|gb|EGE40736.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 295

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 42/214 (19%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V S +LG VL++   RLS H          L ++ST L+     +P LV+I
Sbjct: 81  TLKAFAYAAVLSLLLGAVLAV--GRLSEHRV--------LRWLSTLLVEFFRAMPVLVMI 130

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                ALK Q                        +L   L+ Y  + +AE+ R+G+ +V 
Sbjct: 131 FFIFVALKVQ---------------------PLPALVAGLTLYNGSVLAEVFRTGINSVD 169

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA ALG+   + T  VL PQA+R+++P + SQ +  LK++SL   + + + +  G
Sbjct: 170 RGQREAAYALGMRKTQVTTFVLAPQAVRAMLPTIISQLVVALKDTSLGYLITYEEFLHAG 229

Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384
             I +     +  I + M    IY+ + ++++ F
Sbjct: 230 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 263



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 36/51 (70%), Gaps = 1/51 (1%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           ++G ++  GRLS ++++ W+  + VE FR +P LV+IFF++ + L V P+P
Sbjct: 94  LLGAVLAVGRLSEHRVLRWLSTLLVEFFRAMPVLVMIFFIFVA-LKVQPLP 143


>gi|119383897|ref|YP_914953.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373664|gb|ABL69257.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 240

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 73/126 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE +   IAL+ Y + + +E++R  ++AVP+GQ+EAA A+G+++    R V+ PQ +R +
Sbjct: 86  PEPVVGGIALAFYASTYFSEVIRGAVLAVPKGQLEAARAVGMSYFMGMREVVAPQTLRLL 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP T+  ++++K +S+   +  A++   G  +   T    E+ L    +Y  ++   A 
Sbjct: 146 LPPSTNTAISMIKETSVLSTITVAEITYQGLVVQGATFAPFEVFLTTAALYWLITSAFAH 205

Query: 384 FMNRLN 389
            M+R+ 
Sbjct: 206 GMHRVE 211


>gi|322376869|ref|ZP_08051362.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282676|gb|EFX59683.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 213

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 21/197 (10%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259
           +G ++ L   +  LIF +P  VLIA   Q+H+                 P+L Q  FI  
Sbjct: 13  SGASMTLQVFALVLIFSIPLGVLIAFALQVHWKPLHYLINIYIWIMRGTPLLLQLIFIYY 72

Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
              S         +  IA     AA+ AEI R G+  +P+GQ EAA  L  +     R +
Sbjct: 73  VLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFSPFATVRYI 132

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    + + L    IY
Sbjct: 133 ILPQVTKVVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-IY 191

Query: 375 LSLSIMIALFMNRLNAK 391
           L L  ++ +   ++  K
Sbjct: 192 LILIGIVTILAKKVEKK 208


>gi|209546611|ref|YP_002278529.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537855|gb|ACI57789.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 229

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A GL+  K  R + LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPLKLVRRIWLPRAIRIALPTIAGEIVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +L+    YL L+ +IA     L A++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTVFYLVLTAVIARVFRGLEAQVPVRR 229


>gi|307705125|ref|ZP_07642002.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|307621321|gb|EFO00381.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 213

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 21/197 (10%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259
           +G ++ L   +  LIF +P  VLIA   Q+H+                 P+L Q  FI  
Sbjct: 13  SGASMTLQVFALVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFIYY 72

Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
              S         +  IA     AA+ AEI R G+  +P+GQ EAA  L  +     R +
Sbjct: 73  VLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFSPFDTVRYI 132

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    + + L    IY
Sbjct: 133 ILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-IY 191

Query: 375 LSLSIMIALFMNRLNAK 391
           L L  ++ +   ++  K
Sbjct: 192 LILIGIVTILAKKVEKK 208


>gi|292487229|ref|YP_003530101.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900396|ref|YP_003539765.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291200244|emb|CBJ47372.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552648|emb|CBA19693.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
 gi|312171330|emb|CBX79589.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 227

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 18/214 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           T T+      F     LGIV++L     +R +  +  + L   Y+  +LI G P LV + 
Sbjct: 21  TFTIPLTLIAFTLGLSLGIVVAL-----ARLYGPRPLQNLVRFYV--WLIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +           +   G       F +  I  +    A+ +EI+R+ L++VP+GQ EA
Sbjct: 74  LIF-----------YALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++  +  R +++PQA R  +PPL++ ++ L+K++SLA  +   +L      I   
Sbjct: 123 AHSIGMSWGQTLRRIIMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQRIAAV 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T Q + +      IYL LS +++    RL  K+A
Sbjct: 183 TYQPLILYTEAAIIYLLLSSVLSALQARLEKKLA 216


>gi|298294200|ref|YP_003696139.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930711|gb|ADH91520.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 226

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 7/156 (4%)

Query: 247 DKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           + P LGQ  F F G    G  + P F +  +AL+    A+  EI+R+G+ A P GQ EAA
Sbjct: 65  NTPFLGQIFFIFFGLPALGLRMDP-FTAALVALTINLTAYACEIIRAGIEATPAGQFEAA 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   +A  L+++P A + + P +TSQ + +L  S+L   +  A+L      I ++T
Sbjct: 124 SSLGLKPAQAFFLIIIPPAFQRVWPAMTSQLVIMLLASALCSQISVAELSYEANMIASRT 183

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  E  ++   +YL+L+++    +  +  +    E
Sbjct: 184 FRNFEAYIVVTIMYLALAVLFRELLTWVGRRFVFGE 219



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I+GTL     L   K + W  R YVE FRN P L  IFF++
Sbjct: 36  ILGTLCAWASLKGPKPLRWFIRAYVEFFRNTPFLGQIFFIF 76


>gi|225352760|ref|ZP_03743783.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156367|gb|EEG69936.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 517

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 54/80 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS  + A++AEIVR  + +V  GQME A +LGL H +A   V++PQA    +P + +Q
Sbjct: 394 LTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGLNHHQAMARVIMPQATAIAMPSIINQ 453

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            + ++K+SSL +A+GF +L+
Sbjct: 454 LVIMIKDSSLLLAIGFGELL 473



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +     + A  +G   G  ++S NK++  + +VY+ VFR  P LV  FF
Sbjct: 314 ALLTGLKNTLLITLLSFVIALALGVAFGLMKVSENKILRGVSKVYIAVFRGTPILVWAFF 373

Query: 148 LY 149
            Y
Sbjct: 374 FY 375


>gi|196230490|ref|ZP_03129352.1| polar amino acid ABC transporter, inner membrane subunit
           [Chthoniobacter flavus Ellin428]
 gi|196225420|gb|EDY19928.1| polar amino acid ABC transporter, inner membrane subunit
           [Chthoniobacter flavus Ellin428]
          Length = 247

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + + Y   F + +      I G+          + LS +  A+I+EI R+G+ 
Sbjct: 93  GTPLLVQLFI-YWYAFGEKLSSDLRLIAGA----------LTLSFFEGAYISEIFRAGIE 141

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V   Q+E A +LG +  +  R V+ P A+R  +PPL  Q+ +++K+SSL   +G A+  
Sbjct: 142 GVGASQLETARSLGFSRVQTYRYVIFPLALRQSLPPLAGQFASIIKDSSLLSVLGIAEF- 200

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           S+  T  N  T    EI L     YL L++ I+L+  RL  +
Sbjct: 201 SLAATQTNSITYTTFEIYLPVALGYLILTLPISLWTQRLEQR 242


>gi|238753991|ref|ZP_04615350.1| ABC-type amino acid transport system permease component [Yersinia
           ruckeri ATCC 29473]
 gi|238707743|gb|EEQ00102.1| ABC-type amino acid transport system permease component [Yersinia
           ruckeri ATCC 29473]
          Length = 259

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 81/136 (59%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   AA++A  V++G++AV  GQ +A ++LG    +    V+LPQA+R +
Sbjct: 94  PEITTVVFALALIAAAYLAHAVKAGIMAVGEGQWQAGLSLGFNRWQVLAYVVLPQALRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    IY  L +M+ 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVGLIYFVLCLMLD 213

Query: 383 LFMNRLNAKIALKEKK 398
           +F N +N +   K+ +
Sbjct: 214 VFANAINRRFNPKKNR 229


>gi|167837542|ref|ZP_02464425.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia thailandensis MSMB43]
          Length = 219

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH +  R V+ PQ
Sbjct: 81  GISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTHVQTLRHVICPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + L    IY +LS
Sbjct: 140 ALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLYLAAAAIYWALS 199

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++A    R+  + AL    
Sbjct: 200 TLLARLQGRIETRCALPSAH 219


>gi|57237747|ref|YP_178995.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni RM1221]
 gi|86150632|ref|ZP_01068854.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151103|ref|ZP_01069319.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86152473|ref|ZP_01070678.1| amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|88596150|ref|ZP_01099387.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613743|ref|YP_001000593.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157415176|ref|YP_001482432.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005524|ref|ZP_02271282.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205356402|ref|ZP_03223167.1| putative ABC type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562538|ref|YP_002344317.1| putative ABC-type amino-acid transporter permease [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|315124412|ref|YP_004066416.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|57166551|gb|AAW35330.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni RM1221]
 gi|85838893|gb|EAQ56160.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85842273|gb|EAQ59519.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85843358|gb|EAQ60568.1| amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|87248909|gb|EAQ71872.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190991|gb|EAQ94963.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112360244|emb|CAL35039.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|157386140|gb|ABV52455.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|205345787|gb|EDZ32425.1| putative ABC type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|284926152|gb|ADC28504.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315018134|gb|ADT66227.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315058358|gb|ADT72687.1| Putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni S3]
 gi|315927531|gb|EFV06864.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315932600|gb|EFV11531.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 219

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 23/224 (10%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N + + F    +    KI + + ++ IV   F   +++++ ++  K L   YI  F    
Sbjct: 6   NAQNIEFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDRLSKFLAACYIDIFRNTP 64

Query: 232 LPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           L   +L A      F  PV  GQF         P+     I  S YT++ +AEI+R GL 
Sbjct: 65  LLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L 
Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 170

Query: 351 SVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387
               TI+ +     EI+        I+  I  SLS+++  +  +
Sbjct: 171 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 214


>gi|194472335|ref|ZP_03078319.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205358365|ref|ZP_02655854.2| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194458699|gb|EDX47538.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205334652|gb|EDZ21416.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 239

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           + LP + +  F+ FG   L+L ++  + LH     +     I    VSP F+   IALS 
Sbjct: 56  RGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFAQIPVQMEIENFDVSP-FLCGVIALSL 114

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L LL
Sbjct: 115 LYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLL 174

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+++L   +   DL+    +I  +T +     +I   IYL ++++    + R++ +    
Sbjct: 175 KDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRF 234

Query: 396 EKK 398
           E++
Sbjct: 235 ERR 237


>gi|118590274|ref|ZP_01547677.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118437246|gb|EAV43884.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 215

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 18/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK---YQLHFDKPVLGQFNFIGGSTV 262
           RL+ + +    + LP L     + FGL   V + LK   +  +F+       +FI G   
Sbjct: 34  RLAANIYTTLFRGLPELLTLFLVYFGLQIAVQVLLKMAGFDFYFEVN-----SFIAG--- 85

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                   IALS   +++ +E   S    +P+GQ E   ALGL+  K  RLV+LPQ +R 
Sbjct: 86  -------VIALSFVFSSYTSEAFLSAFRGIPQGQYEGGYALGLSKGKTLRLVVLPQLIRL 138

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L + +L LLK++SL   +G +D++   G     T +      I   IYL L+++ +
Sbjct: 139 ALPALGNSWLVLLKDTSLVSVIGLSDVMRQSGIAARVTKEPFMFFGIACLIYLVLAMISS 198

Query: 383 LFMNRLN 389
             + R+ 
Sbjct: 199 TGLVRIE 205


>gi|330719365|ref|ZP_08313965.1| polar amino acid ABC transporter permease [Leuconostoc fallax KCTC
           3537]
          Length = 213

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 55/90 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IA     AA++AEI R GL +VP+GQ +AA  LG    +    ++LPQ ++ +
Sbjct: 82  PRFEAAVIAFIINYAAYLAEIFRGGLQSVPKGQYDAAKVLGFNKIQTFFKIILPQVIKIV 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +P + ++ +NL+K++SL   +G  D++  G
Sbjct: 142 VPSVGNEVINLVKDTSLVYVIGLGDILRAG 171


>gi|330807874|ref|YP_004352336.1| histidine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375982|gb|AEA67332.1| histidine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 242

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 2/151 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      L  F       + P F +  I L     A+  E 
Sbjct: 67  TTLIRGVPDLVLMLLIFYSLQTWLTSLTDFMEWEYIEIDP-FGAGVITLGFIYGAYFTET 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AVPRGQ+EAA A GL   +  R V+ PQ MR  +P + + ++ +LK ++L   +
Sbjct: 126 FRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATALVSII 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           G ADLV         T Q    +++   IYL
Sbjct: 186 GLADLVKAAQDAGKSTYQLFYFLVLAALIYL 216


>gi|271501779|ref|YP_003334805.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345334|gb|ACZ78099.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 218

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA   LGLT  +    V+ PQ
Sbjct: 80  GIDVSP-WTAASLALTLFTSAFLLDIWHGSVQALPKGQWEACRCLGLTFTQTLTRVIAPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF DL   G  + N T Q  ++
Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVDLTKAGTMLNNVTYQPFKV 186


>gi|207722495|ref|YP_002252931.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206587676|emb|CAQ18258.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 230

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 15/170 (8%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            RLSR+   +  + + + ++S   I G P L+ + L Y  +   P+LG        ++SP
Sbjct: 50  ARLSRY---RLLRGMVMAWVSA--IRGTPALIHLLLAY--YVVPPLLGL-------SISP 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
               +  AL+C T+A++ EI+R  L +VP  Q  AA ALG+   +  R VLLPQ     I
Sbjct: 96  LTAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAI 154

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           PPLTS++  LLK SSL   +   +L +V      Q+   +++  +   +Y
Sbjct: 155 PPLTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQVFAMTAAVY 204


>gi|223939003|ref|ZP_03630888.1| polar amino acid ABC transporter, inner membrane subunit [bacterium
           Ellin514]
 gi|223892299|gb|EEF58775.1| polar amino acid ABC transporter, inner membrane subunit [bacterium
           Ellin514]
          Length = 264

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 74/121 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS ++ A+I+E++R+G+ +V + Q+E+A A+GLT  +  R V++PQA+R  +PPL  Q
Sbjct: 139 LTLSFFSGAYISEVIRAGIESVGKSQIESARAIGLTRAQTYRYVIVPQAIRQSLPPLAGQ 198

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+SSL   +  ++       + + T   +E  +     YL L++ I+++   L  
Sbjct: 199 FVSLIKDSSLLSIISISEFTLNAQEVNSYTFSTLESYIPLAVGYLVLTLPISIWTRHLEQ 258

Query: 391 K 391
           K
Sbjct: 259 K 259


>gi|148926600|ref|ZP_01810282.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845294|gb|EDK22388.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|307747817|gb|ADN91087.1| Amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni M1]
          Length = 221

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 23/224 (10%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N + + F    +    KI + + ++ IV   F   +++++ ++  K L   YI  F    
Sbjct: 8   NAQNIEFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDRLSKFLAACYIDIFRNTP 66

Query: 232 LPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           L   +L A      F  PV  GQF         P+     I  S YT++ +AEI+R GL 
Sbjct: 67  LLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGLN 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L 
Sbjct: 113 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 172

Query: 351 SVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387
               TI+ +     EI+        I+  I  SLS+++  +  +
Sbjct: 173 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 216


>gi|310778237|ref|YP_003966570.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309747560|gb|ADO82222.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 212

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 71/114 (62%), Gaps = 1/114 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+  EI+R  + ++P+GQ EA+  LG+ + K  R ++LPQA+R  +P L+++ +NL+K+
Sbjct: 95  SAYTCEILRGCIQSIPKGQYEASRVLGMNYFKTMRHIILPQALRMSLPALSNEAVNLVKD 154

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L  ++G A+++     I+ +    +  IL  + IYL++S +I L   +   K
Sbjct: 155 TALISSIGMAEILRNSKEIVARDFTIMPFILCGL-IYLAVSSIIILIFKKAEDK 207


>gi|187924662|ref|YP_001896304.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187715856|gb|ACD17080.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 225

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+ L+ F   L R F  K   A+   Y+  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLALA-FLVALVRLFGPKWAVAIVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ +E++R  + ++P+GQ EAA ++G+T  +A R
Sbjct: 84  --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ ++ L+K++SLA  +   ++      I + T + + +      
Sbjct: 136 RAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195

Query: 373 IYLSLSIMIALFMNRLNAK 391
           +YL  S +++    RL  K
Sbjct: 196 VYLVFSSVLSSAQVRLERK 214


>gi|16759799|ref|NP_455416.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16764250|ref|NP_459865.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142428|ref|NP_805770.1| arginine transporter permease ArtQ [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56414021|ref|YP_151096.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179451|ref|YP_215868.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161614846|ref|YP_001588811.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167550403|ref|ZP_02344160.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992142|ref|ZP_02573240.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168236834|ref|ZP_02661892.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168240770|ref|ZP_02665702.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168263591|ref|ZP_02685564.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466507|ref|ZP_02700369.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168819947|ref|ZP_02831947.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194445319|ref|YP_002040127.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194451872|ref|YP_002044919.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194735457|ref|YP_002113982.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197251860|ref|YP_002145842.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197263220|ref|ZP_03163294.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197362944|ref|YP_002142581.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|198242126|ref|YP_002214853.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200390813|ref|ZP_03217424.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929852|ref|ZP_03220873.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205352138|ref|YP_002225939.1| arginine transporter permease ArtQ [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856321|ref|YP_002242972.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213052699|ref|ZP_03345577.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213428040|ref|ZP_03360790.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213609525|ref|ZP_03369351.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|224582739|ref|YP_002636537.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|238913406|ref|ZP_04657243.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|25296626|pir||AF0607 arginine transport system permease protein ArtQ STY0922 [imported]
           - Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16419397|gb|AAL19824.1| arginine 3rd transport system [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502092|emb|CAD05328.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138058|gb|AAO69619.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56128278|gb|AAV77784.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|62127084|gb|AAX64787.1| ABC superfamily (membrane), arginine 3rd transport system
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364210|gb|ABX67978.1| hypothetical protein SPAB_02599 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403982|gb|ACF64204.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194410176|gb|ACF70395.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194710959|gb|ACF90180.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195630931|gb|EDX49517.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197094421|emb|CAR59937.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|197215563|gb|ACH52960.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197241475|gb|EDY24095.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197290078|gb|EDY29435.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197936642|gb|ACH73975.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199603258|gb|EDZ01804.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204320846|gb|EDZ06047.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205271919|emb|CAR36762.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205324501|gb|EDZ12340.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329604|gb|EDZ16368.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205339979|gb|EDZ26743.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205343089|gb|EDZ29853.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205347747|gb|EDZ34378.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708124|emb|CAR32417.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467266|gb|ACN45096.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261246144|emb|CBG23947.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992651|gb|ACY87536.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157471|emb|CBW16961.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312911916|dbj|BAJ35890.1| arginine ABC transporter permease protein ArtQ [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320085163|emb|CBY94950.1| Arginine transport system permease protein artQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321223250|gb|EFX48319.1| Arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322616363|gb|EFY13272.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619613|gb|EFY16488.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622691|gb|EFY19536.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628603|gb|EFY25390.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631540|gb|EFY28296.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637067|gb|EFY33770.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641734|gb|EFY38370.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644473|gb|EFY41013.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650066|gb|EFY46483.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654141|gb|EFY50464.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658056|gb|EFY54323.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663530|gb|EFY59732.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670266|gb|EFY66406.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671502|gb|EFY67624.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676858|gb|EFY72925.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682783|gb|EFY78802.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686462|gb|EFY82444.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322713920|gb|EFZ05491.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323129193|gb|ADX16623.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323196084|gb|EFZ81247.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196770|gb|EFZ81914.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202951|gb|EFZ87985.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208991|gb|EFZ93928.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211896|gb|EFZ96724.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215172|gb|EFZ99917.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222375|gb|EGA06753.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323223891|gb|EGA08190.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229850|gb|EGA13973.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233075|gb|EGA17171.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240810|gb|EGA24852.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243127|gb|EGA27147.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248669|gb|EGA32597.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251670|gb|EGA35537.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323261930|gb|EGA45496.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323271987|gb|EGA55402.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326622606|gb|EGE28951.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326627181|gb|EGE33524.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 238

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           + LP + +  F+ FG   L+L ++  + LH     +     I    VSP F+   IALS 
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSL 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L LL
Sbjct: 114 LYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLL 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+++L   +   DL+    +I  +T +     +I   IYL ++++    + R++ +    
Sbjct: 174 KDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRF 233

Query: 396 EKK 398
           E++
Sbjct: 234 ERR 236


>gi|283956262|ref|ZP_06373742.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791982|gb|EFC30771.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 219

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 23/225 (10%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + + F    +    KI + + ++ IV   F   +++++ ++  K L   YI  F   
Sbjct: 5   FNAQNIEFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDRLSKFLAACYIDIFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            L   +L A      F  PV  GQF         P+     I  S YT++ +AEI+R GL
Sbjct: 64  PLLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGL 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L
Sbjct: 110 NSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAEL 169

Query: 350 VSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387
                TI+ +     EI+        I+  I  SLS+++  +  +
Sbjct: 170 TYNSKTILAKLRSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 214


>gi|319950337|ref|ZP_08024256.1| polar amino acid ABC transporter, inner membrane subunit [Dietzia
           cinnamea P4]
 gi|319436029|gb|EFV91230.1| polar amino acid ABC transporter, inner membrane subunit [Dietzia
           cinnamea P4]
          Length = 276

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 81/153 (52%), Gaps = 4/153 (2%)

Query: 250 VLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           V   F +   S + P       ++  AL+ Y  A IAE+VRSG+  +P+GQ EA +++GL
Sbjct: 123 VFAYFGYFATSDLVPNQHAPLAAVVTALTLYNGAVIAELVRSGVHGLPKGQSEAGLSVGL 182

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +  R + LPQA+ +++P L  Q + +LK+S+L   + + +L++   T+ +     + 
Sbjct: 183 TSGQVLRSIQLPQALTAMLPALVGQLVVVLKDSALGYGITYLELLNWSKTLGSAYANTVP 242

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             ++   +++ ++  +  F   L  ++  +  +
Sbjct: 243 AYIVAGILFIVINYSLTKFAVYLEGRMKKRRAR 275



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 78  PYTSDSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           P+ +D    T+ L+ G   TF  A   ++ A + G L G GRLS    + W C V VE F
Sbjct: 54  PFVTDPEVWTSYLIPGLKGTFTAAGISIVLAVVFGLLFGMGRLSPFAPLRWFCSVIVEFF 113

Query: 137 RNIPPLVVIFFLY 149
           R +P L+++ F Y
Sbjct: 114 RAVPVLLMMVFAY 126


>gi|300698249|ref|YP_003748910.1| amino-acid ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
 gi|299074973|emb|CBJ54542.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
          Length = 230

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 15/189 (7%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            A +  F+  L + + L   RLSR+   +  + + + ++S   I G P L+ + L Y  +
Sbjct: 31  GASVCAFALGLVLSVVLLWARLSRY---RLLRGMVMAWVSA--IRGTPALIHLLLAY--Y 83

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P+LG        ++SP    +  AL+C T+A++ EI+R  L +VP  Q  AA ALG+
Sbjct: 84  VVPPLLGL-------SISPLTAGIG-ALACNTSAYLVEILRGALSSVPDAQRAAAQALGM 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  R VLLPQ     IPPLTS++  LLK SSL   +   +L +V      Q+   ++
Sbjct: 136 REPQVWRHVLLPQVFYRAIPPLTSEFTILLKASSLLSIIAVPELATVARNASLQSDLPLQ 195

Query: 366 IILIWMFIY 374
           +  +   +Y
Sbjct: 196 VFAMTAAVY 204


>gi|307709175|ref|ZP_07645634.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
 gi|307620121|gb|EFN99238.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
          Length = 213

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 21/197 (10%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259
           +G ++ L      LIF +P  VLIA   Q+H+                 P+L Q  FI  
Sbjct: 13  SGASMTLQVFVLVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFIYY 72

Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
              S         +  IA     AA+ AEI R G+  +P+GQ EAA  L  T     R +
Sbjct: 73  VLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFTPFATVRYI 132

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    + + L    IY
Sbjct: 133 ILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-IY 191

Query: 375 LSLSIMIALFMNRLNAK 391
           L L  ++ +   ++  K
Sbjct: 192 LILIGIVTILAKKVEKK 208


>gi|312115906|ref|YP_004013502.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221035|gb|ADP72403.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 358

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 11/126 (8%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G++V+    +L+ A++ + +A++AE++R GL +VP  Q+ A  ALGL + +   LV+LPQ
Sbjct: 216 GASVNKPARALF-AIAVFASAYMAEVIRGGLQSVPENQVTAGRALGLRYSQILALVILPQ 274

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV----------GGTIINQTGQAIEIIL 368
           A+RS +P +   ++ LLK+++L + +G  D + +            +    TG A   ++
Sbjct: 275 AIRSALPGIAGTFIGLLKDTTLVLVIGLFDFLGMIQLAAADPAWSASTTTLTGYAFAALV 334

Query: 369 IWMFIY 374
            W   Y
Sbjct: 335 FWSLCY 340


>gi|260769234|ref|ZP_05878167.1| arginine ABC transporter permease protein ArtQ [Vibrio furnissii
           CIP 102972]
 gi|260614572|gb|EEX39758.1| arginine ABC transporter permease protein ArtQ [Vibrio furnissii
           CIP 102972]
          Length = 229

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 12/172 (6%)

Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +I GLP L+++   Y    Q+ F   + G+F       +SP F+S  IALS   A++ A+
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLF--LITGEFI-----EISP-FISGVIALSLIFASYAAQ 107

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R  L AV RGQ EAA ALG++  +A   ++LPQA+R  +P L +Q+L LLK+++L   
Sbjct: 108 TLRGALKAVGRGQREAASALGISPGRAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSL 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +G  DL+         T +A         +YL ++++    +  ++ K A++
Sbjct: 168 IGVTDLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDKKFAVQ 219


>gi|221369462|ref|YP_002520558.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221162514|gb|ACM03485.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 226

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 14/164 (8%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVLI + Y   F  P LG           P  + L + L    AAF  EI  +GL +
Sbjct: 74  LPPLVLILIMY---FGLPGLG--------LRMPGPLVLILVLGTVLAAFAEEIFWAGLTS 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQ EA  A GL   +    + LPQA R  +PPL ++ L + K ++L   +G ++++S
Sbjct: 123 VPKGQWEAGRATGLGFTQTLVRIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILS 182

Query: 352 VGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKI 392
           V  T  + TG A  + +    ++ ++L L ++  L   R   K+
Sbjct: 183 VASTAQSFTGSAAPLTMGAIAYVIVFLPLVVLTRLLERRFAWKV 226


>gi|212716937|ref|ZP_03325065.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660222|gb|EEB20797.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM
           16992]
          Length = 517

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 54/80 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS  + A++AEIVR  + +V  GQME A +LGL H +A   V++PQA    +P + +Q
Sbjct: 394 LTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGLNHHQAMARVIMPQAAAIAMPSIINQ 453

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            + ++K+SSL +A+GF +L+
Sbjct: 454 LVIMIKDSSLLLAIGFGELL 473



 Score = 43.1 bits (100), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +       A ++G   G  ++S NK++  I +VY+ VFR  P LV  FF
Sbjct: 314 ALLTGLKNTLLITLLSFAIALVLGVAFGLMKVSENKILEGIAKVYIAVFRGTPILVWAFF 373

Query: 148 LY 149
            Y
Sbjct: 374 FY 375


>gi|33865376|ref|NP_896935.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 8102]
 gi|33632545|emb|CAE07357.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 8102]
          Length = 324

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE VR GL A+P  Q EAA  LGL+  +  +LV+LPQA+R  +P LT+Q + LL+N+S
Sbjct: 202 YIAEDVRGGLQAIPPTQREAASVLGLSPLQTLQLVVLPQALRVALPSLTNQAVGLLQNTS 261

Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +G  +L+ +  +++      G+ +E+ L    +Y      +AL    L  ++
Sbjct: 262 LMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMALLARHLEVQL 317


>gi|327478628|gb|AEA81938.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 219

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 73/126 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + A + AE+ R+GL AVPR Q EA  AL +    A R V+LPQA+R ++P L + 
Sbjct: 94  IGIALHYACYTAEVYRAGLDAVPRSQWEAVTALNMKPWTAYRDVILPQALRPVLPALGNY 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +++LK++ +  A+   +++     I +++ + +E I +    +L LS+ +A  + RL  
Sbjct: 154 LISILKDTPVLSAITVVEIMQRAKNIGSESFRYLEPITMVGVFFLILSLGLAWCVRRLEH 213

Query: 391 KIALKE 396
           ++ L  
Sbjct: 214 RMELAR 219


>gi|251793713|ref|YP_003008443.1| glutamine-binding periplasmic protein/glutamine transport system
           permease [Aggregatibacter aphrophilus NJ8700]
 gi|247535110|gb|ACS98356.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Aggregatibacter aphrophilus NJ8700]
          Length = 225

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 111/220 (50%), Gaps = 27/220 (12%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLV 236
           +D    + V SF  G+ ++L    +     EK    + LL      Y+ST  I G P LV
Sbjct: 21  IDKTIPLAVISFFAGVAIALIVALI--RIVEKPNLGIRLLQILCRIYVST--IRGTPMLV 76

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I   + + +  P +G         + P F +  IA S    A+ +E +R+ ++++P+GQ
Sbjct: 77  QI---FIIFYGLPEVG-------IKLDP-FPTAIIAFSINIGAYASETIRAAILSIPKGQ 125

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA+ ++G+ + +     ++PQA+R  +PPL + +++ +K++SLA  V   ++  V   I
Sbjct: 126 WEASYSIGMNYYQTFTRTIMPQALRVSVPPLANTFISNVKDTSLASLVLVTEMFRVAQNI 185

Query: 357 INQTGQAIEIILIW---MFIYLSLSIMIALFMNRLNAKIA 393
              T +  E I+I+     IY  + ++++   +RL  +++
Sbjct: 186 ---TAENYEFIMIYSEAALIYWCICLILSFAQDRLEKRLS 222


>gi|227500392|ref|ZP_03930454.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
 gi|227217455|gb|EEI82774.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
          Length = 491

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 42/215 (19%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            + SF+LG++++L  +       E               + GLP  +L+AL      DK 
Sbjct: 292 LIISFILGLIIALVRSAKIDMADE---------------LSGLPKFILLAL------DK- 329

Query: 250 VLGQF-NFIGGSTVSPEFMSLY---------------IALSCYTAAFIAEIVRSGLIAVP 293
           +LG F   I G+  + + + ++               I+ +  ++A++AE+ R G+ +V 
Sbjct: 330 ILGLFVTIIRGTPTTIQLLIMFNVILANLDNLVLVAIISFALNSSAYMAELFRGGINSVN 389

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +G+ EAA +LGL++ +  + V++PQA+++ +P L ++ + L K +S++  +G ADL    
Sbjct: 390 KGEKEAARSLGLSNFQTMKKVVMPQAIKNSLPALGNEVITLFKETSISGFIGLADLTRGA 449

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             +I+QT  A         IYL    +I + M ++
Sbjct: 450 SIVISQTFDAATAYFSAAIIYL----IIVMLMEKI 480


>gi|154495952|ref|ZP_02034648.1| hypothetical protein BACCAP_00233 [Bacteroides capillosus ATCC
           29799]
 gi|150274835|gb|EDN01891.1| hypothetical protein BACCAP_00233 [Bacteroides capillosus ATCC
           29799]
          Length = 255

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 5/142 (3%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F  G   S  F ++ +A     A + +EI R G+ +VP GQ EA   LG+T  +    V 
Sbjct: 112 FTWGGGESSRFAAVAVAFIINYACYFSEIYRGGIQSVPVGQQEAGQVLGMTRTQIFFKVT 171

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-- 373
           L Q ++ I+PP++++ + L+K++SLA A+   +++ V  + + +  Q I  +L  +F   
Sbjct: 172 LLQMIKRIVPPMSNEIITLVKDTSLARAISLKEVIWVAESFM-KGNQGISGLLWPLFFVA 230

Query: 374 --YLSLSIMIALFMNRLNAKIA 393
             YL  S ++ L + RL  K+A
Sbjct: 231 VYYLVFSGVVTLLLGRLEKKLA 252


>gi|310814816|ref|YP_003962780.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753551|gb|ADO41480.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 216

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 66/122 (54%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y +A++ EI R  + ++ + Q EAA ++GLT  +A R V+LPQAMR   PP     + L+
Sbjct: 95  YASAYLGEIWRGCVQSIAKTQFEAAESMGLTRWQALRDVILPQAMRIATPPTVGFTVQLI 154

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           KN+SLA  VGF +L      I N   +   +  I   +Y ++   ++L+   L  K+ + 
Sbjct: 155 KNTSLASVVGFLELTRAAQVINNSLFEPFLVFGIAAALYFAVCYPLSLWSRNLERKLNVG 214

Query: 396 EK 397
            +
Sbjct: 215 RR 216


>gi|297202814|ref|ZP_06920211.1| glutamate transporter permease [Streptomyces sviceus ATCC 29083]
 gi|297148211|gb|EFH28893.1| glutamate transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 222

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 46/65 (70%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YTAAF+ E +RSG+  VP GQ EAA A+GL   +  RL++LPQA R++I PL +  + L 
Sbjct: 102 YTAAFVCEAIRSGINTVPLGQAEAARAIGLNFSQTLRLIVLPQAFRAVINPLANVLIALT 161

Query: 336 KNSSL 340
           KN+++
Sbjct: 162 KNTTV 166


>gi|297627338|ref|YP_003689101.1| Polar amino acid ABC transporter, inner membrane subunit
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923103|emb|CBL57690.1| Polar amino acid ABC transporter, inner membrane subunit
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 218

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 13/167 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGL 289
           G+P LV++   Y ++F  P +           SP  M    IAL+  T  +  E +R GL
Sbjct: 64  GVPALVML---YVVYFGLPAIHW---------SPTAMVCAVIALAFTTGGYTGEYIRGGL 111

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V  G  EA +AL +      R V++PQ MR  IP L    + + + +SLA ++  ++L
Sbjct: 112 VSVGEGTWEAGLALAMPTADVLRFVVVPQGMRVAIPSLMGLAIQIFQATSLAYSITVSEL 171

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +I + + +A+EI  +   IY  ++I      NR+  +++L+E
Sbjct: 172 TAQAYSISSSSFRALEIFGLAGIIYAIITIPATWVANRVERRLSLRE 218


>gi|239944756|ref|ZP_04696693.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239991221|ref|ZP_04711885.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291448218|ref|ZP_06587608.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
 gi|291351165|gb|EFE78069.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
          Length = 313

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 27/197 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S VLG++L++   RLS H         P+ +++T  I    +L L+   Y +      
Sbjct: 79  VGSLVLGVLLAV--GRLSDHK--------PIRWVATTFIELFRSLPLLITIYAIWV---- 124

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                   G        +L   LS Y     AE++R+G+ +VP+GQ EAA ALG++  + 
Sbjct: 125 --------GFLTDYSMWALAAGLSVYNGCVQAEVLRAGINSVPKGQSEAAYALGMSKTQV 176

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQ--AIE 365
              VL+PQA+RS++P + SQ +  LK++SL   + + +L+     I + T   GQ   + 
Sbjct: 177 MTTVLMPQAIRSMLPTIISQLVVTLKDTSLGFIILYPELLQTARLIASNTQVNGQYPYVS 236

Query: 366 IILIWMFIYLSLSIMIA 382
            I++   IY+++ ++++
Sbjct: 237 TIVVIGTIYIAMCLLLS 253



 Score = 39.7 bits (91), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 14/41 (34%), Positives = 29/41 (70%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++G L+  GRLS +K + W+   ++E+FR++P L+ I+ ++
Sbjct: 83  VLGVLLAVGRLSDHKPIRWVATTFIELFRSLPLLITIYAIW 123


>gi|77465461|ref|YP_354964.1| ABC polar amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126463863|ref|YP_001044976.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|77389879|gb|ABA81063.1| ABC polar amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126105674|gb|ABN78204.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 226

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 14/164 (8%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVLI + Y   F  P LG           P  + L + L    AAF  EI  +GL +
Sbjct: 74  LPPLVLILIMY---FGLPGLG--------LRMPGPLVLILVLGTVLAAFAEEIFWAGLTS 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQ EA  A GL   +    + LPQA R  +PPL ++ L + K ++L   +G ++++S
Sbjct: 123 VPKGQWEAGRATGLGFTQTLVQIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEILS 182

Query: 352 VGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKI 392
           V  T  + TG A  + +    ++ ++L L ++  L   R   K+
Sbjct: 183 VASTAQSFTGSAAPLTMGAIAYVIVFLPLVVLTRLLERRFAWKV 226


>gi|261823280|ref|YP_003261386.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607293|gb|ACX89779.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 244

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 94/163 (57%), Gaps = 14/163 (8%)

Query: 226 TFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278
           T+++F  G P LV + L Y        LGQF ++  S +      P + +L ++LS  T 
Sbjct: 55  TYVLFFRGTPLLVQLFLIYY------GLGQFPWVRESMLWPFLREPHWCAL-LSLSLCTG 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI+R GL +VP GQ+E+A A G+      + ++ P A+R  +P   ++ ++++K++
Sbjct: 108 AYASEIIRGGLQSVPVGQIESARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKST 167

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SLA  +   ++  +   +I +T +A+E+ L+   IYL +++++
Sbjct: 168 SLASIITLMEITGIAARLIAETYRALEVFLVAGAIYLFINLIL 210


>gi|167855090|ref|ZP_02477863.1| polar amino acid ABC transporter, inner membrane subunit
           [Haemophilus parasuis 29755]
 gi|167853828|gb|EDS25069.1| polar amino acid ABC transporter, inner membrane subunit
           [Haemophilus parasuis 29755]
          Length = 238

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS  +I G P LV I + +   +  P +G F       + P   ++ I  S    A+ +
Sbjct: 76  YIS--IIRGTPMLVQICIVF---YGLPAIGIF-------IDPIPAAI-IGFSINIGAYGS 122

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ +++VP+GQ EA   +G+T+ +  R ++ PQA R  +PPL++ ++ L K++SLA 
Sbjct: 123 ETIRAAILSVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLAS 182

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            V   ++  V   + N +   + + +    IY     ++     RL  +
Sbjct: 183 VVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFFIQARLEKR 231


>gi|163857136|ref|YP_001631434.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii DSM 12804]
 gi|163260864|emb|CAP43166.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii]
          Length = 197

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    A+ AE+VR  ++AV  GQ EAA+AL +T  +  R ++LPQA  +++PP  + 
Sbjct: 73  VVLAANAGAYGAEVVRGAILAVAPGQREAAVALNMTPGRIMRRIVLPQAFPAMLPPAGNL 132

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN++L   +   DL   G  +  +T +  E+ ++ + +Y +++++I        A
Sbjct: 133 LIELLKNTALVSLITITDLTFRGQMLRAETLRTTEVFILLLLLYFAVALVI-------TA 185

Query: 391 KIALKEKK 398
            I L E++
Sbjct: 186 GIRLLERR 193


>gi|158424240|ref|YP_001525532.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331129|dbj|BAF88614.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 234

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 20/217 (9%)

Query: 167 FGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           FG+  N R   LS   LT+  +    V S VLG+ L +    +   +    G+ + L Y+
Sbjct: 9   FGVIANYRDELLSGLLLTIQLS----VSSIVLGLALGIMLASVRAMYGGLIGRIIKL-YV 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++   P LV +   + + F  PVLG    +     +   + + I L  YT     EI
Sbjct: 64  E--VVRNTPFLVQL---FIIFFGLPVLG----VRVDATAAALIGMTINLGAYTT----EI 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV R Q+EA  +LG+T  +  R +++P A+  + P L SQ++ +   SS+  A+
Sbjct: 111 IRAGIDAVHRSQVEAGQSLGMTTYQIYRHIIIPPAIAKVYPALCSQFILMTLASSVCSAI 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              +L SV   I +Q+ ++ E+ +I   IYL+LS+++
Sbjct: 171 SAEELSSVTAQIESQSYRSFEVYVIATLIYLALSMVL 207


>gi|119383823|ref|YP_914879.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373590|gb|ABL69183.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 230

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 19/233 (8%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D S+V+    FL  +GL F  L     A  FV   VLG  L+L      +H        L
Sbjct: 5   DFSVVVDALPFLW-KGLQFSLLL---TAVAFVAGLVLGTGLALV-----QHLQVPVLAQL 55

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTA 278
              Y++  LI  +P   LI + +   F  P++  + F  G  +     ++ ++  S + A
Sbjct: 56  AKGYVA--LIRSIP---LIMVLFWFFFLVPLIAGWMFNNGRPMPVGGVLTAFLTFSLFEA 110

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI+R GL +V +GQ EAA AL L+  +  R ++LPQ  R   P + SQ + L +++
Sbjct: 111 AYYSEIIRVGLRSVGKGQYEAADALSLSTLQTYRHIILPQVFRVTSPIILSQTIILFQDT 170

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIIL----IWMFIYLSLSIMIALFMNR 387
           SL   +   DLV     +    G+ +E+ L    +++ I  S S ++A+   R
Sbjct: 171 SLVYVLSLTDLVGAASKVAQLNGRLVEMYLTVAAVYLVICTSASQLVAVLRKR 223


>gi|271498822|ref|YP_003331847.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270342377|gb|ACZ75142.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 221

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 32/207 (15%)

Query: 190 FVFSFVLGIVLSLF----ATRLSR--HFHEKTGKALPLLYISTFLIF-GLPTLVLIALKY 242
           F+   ++G++++L     AT L +   F+    +  PLL +  FLIF GLP+        
Sbjct: 31  FILGLMIGVLVALLRLYGATPLKKICDFYVWMIRGTPLL-VQLFLIFYGLPS-------- 81

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                           G T+   F +  I  S    A+ +EIVR  +++VP+GQ  AA +
Sbjct: 82  ---------------AGITLD-AFPAALIGFSLNVGAYSSEIVRGAILSVPKGQWNAAYS 125

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG++  +A R V++PQ++   +PPL + +++L+K++SLA  +   ++      I++ T +
Sbjct: 126 LGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVPEMFLAAQRIVSVTYE 185

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLN 389
            + + +    IYL  S +++    RL 
Sbjct: 186 PLILYIEAALIYLMFSTVLSKLQTRLE 212


>gi|227542732|ref|ZP_03972781.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227181498|gb|EEI62470.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 226

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 10/146 (6%)

Query: 259 GSTVSPE---------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G T++PE         F    +A   YT+ F+AE +RSG+  V  GQ EAA +LGL+  +
Sbjct: 80  GLTLAPENDNFIKNNNFWLAVLAFVLYTSTFVAESLRSGINTVHFGQAEAARSLGLSFTQ 139

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIIL 368
             R V+ PQA +S + PL +  + L KN+++A  +G A+  + +  TI N     I + +
Sbjct: 140 TFRFVVFPQAFKSAVVPLGNTLIALTKNTTIASVIGVAEASLLMKSTIENHANHTILVFM 199

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
           I+   ++ +++ + L   R   + A+
Sbjct: 200 IFALGFIIITLPMGLLFTRYTRRKAV 225



 Score = 36.2 bits (82), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 92  GFVNTFW----LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           G +  FW    L F   I A I+G ++ A R+S   ++  I R Y+E  RN P  ++I F
Sbjct: 11  GLLGAFWVTIKLTFFSAIGAFILGVILTAMRVSPVAILRGIARFYIETVRNTPLTLIILF 70

Query: 148 ----LYKSV-LSVLPIPDHSI 163
               LY+++ L++ P  D+ I
Sbjct: 71  CSIGLYQNLGLTLAPENDNFI 91


>gi|219852260|ref|YP_002466692.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanosphaerula palustris E1-9c]
 gi|219546519|gb|ACL16969.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanosphaerula palustris E1-9c]
          Length = 226

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 13/165 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           L+ G P L+L+   + ++F  P +G +F+          F++  +       A+ +E +R
Sbjct: 61  LVKGCPLLILL---FIIYFGLPSVGIRFS---------AFVASVLGFILCNGAYTSEYIR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L ++  GQM AA+ALG+T R+A R V+LPQAMR  IP + ++ + L+K SSLA  +  
Sbjct: 109 GALGSIRDGQMTAALALGMTRRQAIRYVMLPQAMRRAIPGIANEMIYLIKYSSLAYMLTC 168

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++   G  +  +     E   +   +YL+L  +     N L  +
Sbjct: 169 IEVTGAGKIVAAKYFTYTETFAVVGLVYLALVTIATWMANYLEVR 213


>gi|153010818|ref|YP_001372032.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562706|gb|ABS16203.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 215

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 87/173 (50%), Gaps = 13/173 (7%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G P L+ +   + L+F  P +G         + P F +  I L     A+ A
Sbjct: 56  YVSVFR--GTPCLLQL---FVLYFGGPQIG-------INLEP-FAAGAIGLGLNIGAYYA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R  ++ V  GQ EAA ++G ++ ++ R V+LPQA R +I  L    + L+K S+L  
Sbjct: 103 EAMRGAILTVDTGQNEAARSIGFSNGQSMRFVVLPQAARLMIRSLGVNTVMLIKGSALVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A+   +L       I  T +  EI  I   IY+ L  ++A F++ L A+ ALK
Sbjct: 163 AISVVELTYTAQRFIGSTYRPFEIFGIAAAIYMVLIYIVARFVDFLEARYALK 215


>gi|209516320|ref|ZP_03265177.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503256|gb|EEA03255.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 254

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 70/125 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A++    A+  EIVRSG+ ++ RGQ++AA ALGL  R+  R V+LPQA+ ++ 
Sbjct: 89  EIQAAILAMTVNLGAYATEIVRSGIDSISRGQVQAAQALGLHGRQVFRYVVLPQALANVF 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L  Q L ++  S++   +   DL      I ++  ++ E  +I    YL +SI++   
Sbjct: 149 PALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITATYLLMSIVLRQL 208

Query: 385 MNRLN 389
           +NR  
Sbjct: 209 LNRFG 213


>gi|153952480|ref|YP_001398011.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939926|gb|ABS44667.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 219

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 23/224 (10%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N + + F    +    KI + + ++ IV   F   +++++ ++  K L   YI  F    
Sbjct: 6   NAQNIQFLMQGLFLTLKIALATCIISIVFGTFLA-ITKNYGDRLSKFLAACYIDIFRNTP 64

Query: 232 LPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           L   +L A      F  PV  GQF         P+     I  S YT++ +AEI+R GL 
Sbjct: 65  LLLWMLAAC-----FVLPVFFGQF---------PQAFWGTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L 
Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 170

Query: 351 SVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIALFMNR 387
               TI+ +     EI+        I+  I  SLS+++  +  +
Sbjct: 171 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKK 214


>gi|295693351|ref|YP_003601961.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|295031457|emb|CBL50936.1| Amino acid ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
          Length = 223

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 27/193 (13%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263
           R F  +  + +  LY+  F I  +PT+VL+ L Y      LH + P              
Sbjct: 47  RTFKNRPLRFVLRLYLEFFRI--VPTVVLLYLVYYILPRSLHVNWPA------------- 91

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             +M++ +A S + AA  ++IVR  L +VP+ Q E+ +ALGL   +  R VLLPQA++  
Sbjct: 92  -TWMAV-LAFSMWVAAEFSDIVRGALESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLE 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLS 378
           +P   +    ++K +SL + +   ++++VG  II    Q     + W++     +Y  L 
Sbjct: 150 LPATINLATRVIKTTSLLMIINIMEVINVGQQIIEANNQQYPAGVFWVYGFIFILYFILD 209

Query: 379 IMIALFMNRLNAK 391
             ++ +  RL AK
Sbjct: 210 YPLSAWAKRLTAK 222



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 38/68 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S    ++ G   + W+A   ++    +GT+ G  R   N+ + ++ R+Y+E FR +P 
Sbjct: 11  EGSNFARLMAGLWTSIWIAALSLVIGLAVGTIFGILRTFKNRPLRFVLRLYLEFFRIVPT 70

Query: 142 LVVIFFLY 149
           +V+++ +Y
Sbjct: 71  VVLLYLVY 78


>gi|146280412|ref|YP_001170565.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145568617|gb|ABP77723.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
          Length = 219

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 73/126 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + A + AE+ R+GL AVPR Q EA  AL +    A R V+LPQA+R ++P L + 
Sbjct: 94  IGIALHYACYTAEVYRAGLDAVPRSQWEAVTALNMKPWTAYRDVILPQALRPVMPALGNY 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +++LK++ +  A+   +++     I +++ + +E I +    +L LS+ +A  + RL  
Sbjct: 154 LISILKDTPVLSAITVVEIMQRAKNIGSESFRYLEPITMVGVFFLILSLGLAWCVRRLEH 213

Query: 391 KIALKE 396
           ++ L  
Sbjct: 214 RMELAR 219


>gi|89074704|ref|ZP_01161162.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89049468|gb|EAR55029.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 216

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 19/208 (9%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238
           TL M T   IF  S ++G++L+L      R +       L  LYIS F   G P LV L 
Sbjct: 22  TLLMATIGAIF--SLIVGLILALI-----RIYQLPLLNILTQLYISFFR--GTPLLVQLF 72

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L Y L    P L   +          F +  I LS + AA++AE +R+ +  V R Q E
Sbjct: 73  LLYYGLPQIIPSLVGLD---------AFSAAVIGLSLHFAAYMAESIRAAITGVDRSQRE 123

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A++ +G+T  +  R ++LPQA R  +P L + +++++K++SLA  +G  ++++      +
Sbjct: 124 ASLTIGMTEWQTMRRIILPQATRIALPSLMNYFIDMIKSTSLAFTLGVPEIMAKAQMEAS 183

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + +  E  L    IY ++ +++  + N
Sbjct: 184 SSFKFFEAFLAVAMIYWAVVVVLTRYNN 211


>gi|328886198|emb|CCA59437.1| glutamate permease [Streptomyces venezuelae ATCC 10712]
          Length = 285

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 42/214 (19%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V S  LG VL+    RLS H          L +IST L+     +P LV+I
Sbjct: 71  TLKAFAYAAVLSLALGAVLA--TGRLSEH--------RALRWISTLLVEFFRAMPVLVMI 120

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                ALK Q                        +L   L+ Y  + +AE+ R+G+ AV 
Sbjct: 121 FFIFVALKVQ---------------------ALPALVAGLTLYNGSVLAEVFRTGIHAVA 159

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA ALG+   +    VL PQA+R+++P + SQ +  LK++SL   + + + +  G
Sbjct: 160 RGQGEAAYALGMRKTQVMTYVLAPQAVRAMLPAIISQLVVALKDTSLGFLITYEEFLHAG 219

Query: 354 GTIINQTGQA---IEIILIWMFIYLSLSIMIALF 384
             I +        I ++L+   IY+ + ++++ F
Sbjct: 220 KLIASNLDYDLPFIPVVLVISPIYIGMCMLLSWF 253



 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 28/40 (70%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +G ++  GRLS ++ + WI  + VE FR +P LV+IFF++
Sbjct: 85  LGAVLATGRLSEHRALRWISTLLVEFFRAMPVLVMIFFIF 124


>gi|190150935|ref|YP_001969460.1| amino-acid ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307264289|ref|ZP_07545878.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189916066|gb|ACE62318.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|306870353|gb|EFN02108.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 238

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 109/211 (51%), Gaps = 25/211 (11%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 96  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI- 366
            +  R ++ PQA+R +IPPL++ ++ L K++SLA  V   ++  V   + N +   + + 
Sbjct: 148 MQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207

Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAKIA 393
               ++ W F ++ L ++ A    R N  +A
Sbjct: 208 IEAGLIYWCFCWV-LFLIQAKLERRFNCFVA 237


>gi|323267946|gb|EGA51425.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
          Length = 245

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 2/183 (1%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           + LP + +  F+ FG   L+L ++  + LH     +     I    VSP F+   IALS 
Sbjct: 62  RGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSL 120

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L LL
Sbjct: 121 LYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLL 180

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+++L   +   DL+    +I  +T +     +I   IYL ++++    + R++ +    
Sbjct: 181 KDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRF 240

Query: 396 EKK 398
           E++
Sbjct: 241 ERR 243


>gi|313771501|gb|EFS37467.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
 gi|313811372|gb|EFS49086.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
 gi|313830874|gb|EFS68588.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
 gi|313833301|gb|EFS71015.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
 gi|314973761|gb|EFT17857.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
 gi|314976410|gb|EFT20505.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
 gi|314983309|gb|EFT27401.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
 gi|315096537|gb|EFT68513.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
 gi|327326786|gb|EGE68569.1| amino acid ABC transporter, permease protein [Propionibacterium
           acnes HL096PA2]
 gi|327443012|gb|EGE89666.1| hypothetical protein HMPREF9570_02518 [Propionibacterium acnes
           HL043PA1]
 gi|327445134|gb|EGE91788.1| hypothetical protein HMPREF9571_02120 [Propionibacterium acnes
           HL043PA2]
 gi|328760217|gb|EGF73790.1| amino acid ABC transporter, permease protein [Propionibacterium
           acnes HL099PA1]
          Length = 182

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +    V     +  I L     A++AEI RSGL +V  GQ EAA ALG+      R
Sbjct: 7   QFASVETEKVVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIVR 66

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
             ++PQAMR IIPP  ++ + +LK +SL +A+ F  DL      I N T   I ++++  
Sbjct: 67  RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126

Query: 372 FIYLSLS 378
             YL ++
Sbjct: 127 CWYLVMT 133


>gi|159186208|ref|NP_356121.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159141342|gb|AAK88906.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 222

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+    A+  EI+R G+ ++P+GQ+EA +ALGL   +  R ++L  A+R++ P LTSQ
Sbjct: 95  IALALNGGAYAIEIIRGGVDSIPKGQVEAGLALGLHRAQIFRHIILKPALRAVYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIALF 384
           ++ L   +S+  ++   +L SV   I   T ++ E+      +YL + S+M+ +F
Sbjct: 155 FIMLTLTTSVCTSIAAYELTSVAQKIEADTFRSFEVYFSITLLYLVISSLMMGIF 209



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+  + T  LA +GM  AT++G L    R S  KL+  +   +VE  RN P LV IFF+
Sbjct: 17  LLLACLATIGLAIAGMSLATVLGVLGVVARRSRFKLLRGLVIGFVEAIRNTPFLVQIFFI 76

Query: 149 Y 149
           +
Sbjct: 77  F 77


>gi|330942300|gb|EGH44928.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 277

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|91784367|ref|YP_559573.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|296158455|ref|ZP_06841286.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|91688321|gb|ABE31521.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295891399|gb|EFG71186.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 225

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+ L+ F   L R F  K   A+   Y+  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLALA-FLVALVRLFGPKWAVAIVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ +E++R  + ++P+GQ EAA ++G+T  +A R
Sbjct: 84  --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ ++ L+K++SLA  +   ++      I + T + + +      
Sbjct: 136 RAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195

Query: 373 IYLSLSIMIALFMNRLNAK 391
           +YL  S +++    RL  K
Sbjct: 196 VYLVFSSVLSSAQVRLERK 214


>gi|325063884|gb|ADY67574.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 222

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+    A+  EI+R G+ ++P+GQ+EA +ALGL   +  R ++L  A+R++ P LTSQ
Sbjct: 95  IALALNGGAYAIEIIRGGVDSIPKGQVEAGLALGLHRAQIFRHIILKPALRAVYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIALF 384
           ++ L   +S+  ++   +L SV   I   T ++ E+      +YL + S+M+ +F
Sbjct: 155 FIMLTLTTSVCTSIAAYELTSVAQQIEADTFRSFEVYFSITLLYLVISSLMMGVF 209



 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+  + T  LA +GM  AT+IG L    R S  KL+  +   +VE  RN P LV IFF+
Sbjct: 17  LLLACLATIGLAIAGMSLATVIGVLGVVARRSRFKLLRGLVIGFVEAIRNTPFLVQIFFI 76

Query: 149 Y 149
           +
Sbjct: 77  F 77


>gi|307544139|ref|YP_003896618.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216163|emb|CBV41433.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 234

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 34/206 (16%)

Query: 188 KIFVFSFVLGIVLSLF--ATRLSRHF--HEKTGKALPLLYISTFLIFGLPTLVLIALKY- 242
           ++ V S +L +VL L   + ++SR++  H      L  LY  T LI G+P LVL+ L + 
Sbjct: 20  ELAVLSLILAVVLGLITASAKMSRNWLLHR-----LGTLY--TTLIRGVPDLVLMMLLFF 72

Query: 243 -------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                           FD  +    N         EF++  + +     A++ E  R   
Sbjct: 73  GGQIGVNMFTDWLYARFDIDIFININ---------EFVAGVVTIGLIFGAYMGETFRGAF 123

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AV  GQ+EA  A G++H    R +  PQ MR  +P L++ ++ LLK ++L   +G +D+
Sbjct: 124 LAVDNGQIEAGRAYGMSHWLVFRRIRFPQMMRHALPGLSNNWMVLLKTTALVSVIGLSDM 183

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYL 375
           V V       T +    ++I   +YL
Sbjct: 184 VRVAAEASKATREPFTFMIIVAIVYL 209


>gi|322385753|ref|ZP_08059397.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321270491|gb|EFX53407.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 213

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 22/188 (11%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS    T+   A + VFS  LGI+L+      S     K  + L  L+I  +++ G P L
Sbjct: 12  LSGAATTLQVFALVLVFSIPLGIMLAF-----SMQIRLKPLQWL--LHIYIWIMRGTPLL 64

Query: 236 V-LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           + LI + Y L    P LG + + I  +          IA +   AA+ AEI R G+ ++P
Sbjct: 65  LQLIFIYYVL----PSLGIRLDRIPAAI---------IAFTLNYAAYFAEIFRGGISSIP 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA  L  T  +  RL++LPQ ++ ++P + ++ + L+K++SL  A+G +DL+   
Sbjct: 112 TGQYEAAKVLKFTPVQTIRLIILPQVVKIVLPSVFNEVMTLVKDTSLVYALGISDLILAS 171

Query: 354 GTIINQTG 361
            T  N+  
Sbjct: 172 RTAANRDA 179


>gi|302189024|ref|ZP_07265697.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 232

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|227487311|ref|ZP_03917627.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227092737|gb|EEI28049.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 226

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 10/146 (6%)

Query: 259 GSTVSPE---------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G T++PE         F    +A   YT+ F+AE +RSG+  V  GQ EAA +LGL+  +
Sbjct: 80  GLTLAPENDNFIKNNNFWLAVLAFVLYTSTFVAESLRSGINTVHFGQAEAARSLGLSFTQ 139

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIIL 368
             R V+ PQA +S + PL +  + L KN+++A  +G A+  + +  TI N     I + +
Sbjct: 140 TFRFVVFPQAFKSAVVPLGNTLIALTKNTTIASVIGVAEASLLMKSTIENHANHTILVFM 199

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
           I+   ++ +++ + L   R   + A+
Sbjct: 200 IFALGFIIITLPMGLLFTRYTRRKAV 225


>gi|148925846|ref|ZP_01809533.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145844832|gb|EDK21936.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 233

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 107/209 (51%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F  + + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLDLICLSVEETLRPSFACVIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 82  DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D  +  A    F+   WL    +F G+I + IIG           K++  IC++Y+E  R
Sbjct: 2   DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61

Query: 138 NIPPLVVIFFLYKSV 152
           N P L+ +FFLY ++
Sbjct: 62  NTPLLIQLFFLYYAL 76


>gi|255525600|ref|ZP_05392534.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296185487|ref|ZP_06853897.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255510690|gb|EET86996.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296050321|gb|EFG89745.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 221

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 29/234 (12%)

Query: 167 FGMFLNNRGLSFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KA 218
           F  F+N   +  P+L  T++ +    VF+ +L IV+S+          +  G      +A
Sbjct: 5   FQWFINLFPIVLPSLKLTIEISLVSLVFTLLLSIVISIVRYYKVWGISQLFGVYITFFRA 64

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            PL+     L FGLP  V+ ALK    F   V                    +AL+  TA
Sbjct: 65  TPLVAQLFILYFGLPC-VIPALKSMTAFQATV--------------------VALTLNTA 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           +F+AE +R+ L +V  GQ+EA  ++ +T  +    V+LPQA    +P L +Q++ ++K S
Sbjct: 104 SFMAETLRAALESVEVGQLEACYSMSMTKYQTMMRVVLPQAFVVALPSLGNQFIGIIKGS 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   VG AD+++        T +  E  L    IYL + I +      L  +I
Sbjct: 164 ALGFTVGLADIMAKAKMEAALTLRFFEAYLCVTLIYLVIVIFVEKIQRLLEKRI 217


>gi|28870093|ref|NP_792712.1| glutamine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28853339|gb|AAO56407.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 246

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 10/133 (7%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G+P L++I   Y   F  P+L   N  G       F ++   L  Y +A++ EI+ 
Sbjct: 69  YVMRGIPLLMVIFWTY---FLVPLLIGHNITG-------FTTMLCTLVVYQSAYLCEIIS 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++++K +SL   +  
Sbjct: 119 GAIQALPAGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFISIIKETSLGYVINV 178

Query: 347 ADLVSVGGTIINQ 359
            ++      I NQ
Sbjct: 179 QEVTFAANQINNQ 191


>gi|78066234|ref|YP_369003.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77966979|gb|ABB08359.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia sp. 383]
          Length = 241

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 10/128 (7%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L+LI   Y   F  P+L   +  G +TV         AL+    A++A  V +G++A
Sbjct: 72  IPVLMLIFWTY---FLMPMLLHMDVPGLATV-------VCALALIGGAYLAHAVHAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
              GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  
Sbjct: 122 AGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSF 181

Query: 352 VGGTIINQ 359
           V   + N+
Sbjct: 182 VATQVNNR 189


>gi|323529954|ref|YP_004232106.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386956|gb|ADX59046.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 218

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++  + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQ
Sbjct: 80  GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFSQQLRYIVWPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++  + P     + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++ 
Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +  +   L  +  + + +
Sbjct: 199 FPLTWYARVLEKRNKVGQHR 218


>gi|237808728|ref|YP_002893168.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500989|gb|ACQ93582.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 218

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 69/127 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  +++AF+ +I    + ++P+GQ EA+  LGL+  +  R V+LPQA+R  I P    
Sbjct: 91  LALVLFSSAFLCDIWSGCIESLPKGQWEASRCLGLSFFQTMRYVILPQALRVAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K ++L   +GF +L   G  + N T Q  ++  +   IY  +   ++LF   L  
Sbjct: 151 SVQVVKGTALTSIIGFVELTKAGTMLNNATFQPFKVFALVALIYFMICYPLSLFSQFLER 210

Query: 391 KIALKEK 397
           K+ +  K
Sbjct: 211 KLNVSGK 217


>gi|219872122|ref|YP_002476497.1| amino acid ABC transporter permease [Haemophilus parasuis SH0165]
 gi|219692326|gb|ACL33549.1| ABC-type amino acid transport system, permease component
           [Haemophilus parasuis SH0165]
          Length = 212

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 23/206 (11%)

Query: 193 SFVLGIVLSL-----FATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLH 245
           SF++G+ +++       T ++  FH      L L ++  ++  I G P LV I + +   
Sbjct: 16  SFIIGMAIAVGVALVRVTSVNSAFHR-----LLLWFVKGYISIIRGTPMLVQICIVF--- 67

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P +G F       + P   ++ I  S    A+ +E +R+ +++VP+GQ EA   +G+
Sbjct: 68  YGLPAIGIF-------IDPIPAAI-IGFSINIGAYGSETIRAAILSVPKGQWEAGYTIGM 119

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +  R ++ PQA R  +PPL++ ++ L K++SLA  V   ++  V   + N +   + 
Sbjct: 120 TYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLP 179

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           + +    IY     ++     RL  +
Sbjct: 180 VYIEAGLIYWCFCWVLFFIQARLEKR 205


>gi|212716943|ref|ZP_03325071.1| hypothetical protein BIFCAT_01887 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660228|gb|EEB20803.1| hypothetical protein BIFCAT_01887 [Bifidobacterium catenulatum DSM
           16992]
          Length = 225

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R+    + +  K LPL  I  F++ G             
Sbjct: 29  LFSTILGVILVMMRISPVASLRIVSGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EA  AL
Sbjct: 76  -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEACRAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361
           GL   ++   ++LPQA R  + PL +  + LLKNS++A A   A   S  +   I  ++ 
Sbjct: 131 GLNFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEYRSD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             I I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 191 VIIPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|242238358|ref|YP_002986539.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130415|gb|ACS84717.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 218

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    ++A+P+GQ EA   LGLT  +    V+ PQ
Sbjct: 80  GIDVSP-WTAAALALTLFTSAFLVDIWHGSVLALPKGQWEACRCLGLTFTQTLTRVVAPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTFQPFKV 186


>gi|228477605|ref|ZP_04062238.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|228250749|gb|EEK09947.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
          Length = 213

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 57/91 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179


>gi|171318717|ref|ZP_02907859.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171096084|gb|EDT41011.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 603

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 28/223 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLIFGLPTLVLIALKYQLHF 246
           V  F L I L+L   RLSR          PLL    +  T+L   +PT+VL+ L   L +
Sbjct: 92  VLGFALAIPLAL--ARLSRS---------PLLSSCSWAYTWLFRSIPTIVLLLLLNNLGY 140

Query: 247 --DKPVLG----QFNFIGGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
             D   LG       F+ G T   ++P FM+  + L+   AAF AE +R G+++V  GQ 
Sbjct: 141 LYDTVRLGIPFTDIVFLRGPTTDLITP-FMAAILGLTLTQAAFAAEAIRGGILSVDHGQR 199

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALGL   + T  ++LPQAMR+ +P   +  + L K +++   +   DL      + 
Sbjct: 200 EAAAALGLPRARQTWRIVLPQAMRATLPAAFNDVIGLAKGTAVVYILAMPDLFYTVQIVY 259

Query: 358 NQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++  + I +++   +W  + L+    I + + R  A+ A +++
Sbjct: 260 HRNLEVIPMLMVATVWYLVILTALSAIQVHIERHYARGATRDQ 302


>gi|150377557|ref|YP_001314152.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150032104|gb|ABR64219.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 307

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 21/190 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH----- 245
           V    +G+VL++     SR F   +       +   +   G+P LV +   Y L      
Sbjct: 78  VLGLAIGVVLAIMRLSASRVFQVVS-------WGWIWFFRGVPPLVQMIFWYNLALLLPE 130

Query: 246 ------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                 F  P L  +N      ++P F +  + L+   +A+ AE++R+G+ AV  GQ EA
Sbjct: 131 ISIGIPFGGPKLLSWN--TNQLITP-FSAAIMGLAFTESAYAAEMIRAGIQAVNAGQTEA 187

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A  LG+   +  R ++LPQA+R +IPP+ +  +++LK +SL   +   DL+     +  +
Sbjct: 188 AATLGMKRGQTLRRIVLPQALRIVIPPIGNDTISMLKFTSLVSVLALPDLLYSAQMVYAR 247

Query: 360 TGQAIEIILI 369
           T Q + ++L+
Sbjct: 248 TYQTVPLLLV 257



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++  ++ AIL G   T  L F  M+    IG ++   RLSA+++   +   ++  FR +P
Sbjct: 54  AEYMFSPAILSGLGMTLLLTFLAMVLGLAIGVVLAIMRLSASRVFQVVSWGWIWFFRGVP 113

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           PLV + F Y   L++L +P+ SI +PFG
Sbjct: 114 PLVQMIFWYN--LALL-LPEISIGIPFG 138


>gi|319784006|ref|YP_004143482.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169894|gb|ADV13432.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 215

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 13/178 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +  +Y+S F   G P L+ +   + L+F  P +G         + P F +  I L   
Sbjct: 50  RTIGTVYVSLFR--GTPCLIQL---FVLYFGGPQIG-------INLEP-FAAGVIGLGLN 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AE +R  L+AV RGQ EAA  +G +  +  R V+LPQA R +I PL    + LLK
Sbjct: 97  IGAYMAESIRGALVAVDRGQTEAARTIGFSRFQTLRKVVLPQAARLMIRPLGVNTVALLK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            S+L   +   +L       I  T +  EI  +   +Y+ +   +A  ++ L+ + A+
Sbjct: 157 GSALVSTISVVELTYTAQRFIGSTYKPFEIFGVAALLYMIMVYAVARVVDLLDKRFAI 214


>gi|315102984|gb|EFT74960.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
          Length = 198

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +GL  ++   L  ++ F  P   QF  I    V     +  I L     A++ EI RS
Sbjct: 1   MFWGLLAVLYPTLPIEVPFGGP---QFASIETEKVVTTLATTIIGLDLNENAYLTEITRS 57

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL +V  GQ EAA  LG+      R V++PQ MR II PL ++ + +LK +SL +AV F 
Sbjct: 58  GLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGNETIGMLKTTSLVLAVPFT 117

Query: 348 -DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            DL      I N+    I ++++  F YL ++
Sbjct: 118 LDLQYATSAIANRIYAPIPLLVVTAFWYLVMT 149


>gi|300312809|ref|YP_003776901.1| glutamine ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075594|gb|ADJ64993.1| ABC-type glutamine transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 218

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 18/144 (12%)

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCY------------------TAAFIAEIVRSGLIAVP 293
           G   F+ G+ +  + M +Y AL                     + A+IAEIVR   ++VP
Sbjct: 57  GYVEFVRGTPIVVQVMFIYFALPVLLGIRVDPMTAAVTSIVVNSGAYIAEIVRGAFLSVP 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RG  EA +ALGL   +    V+ P A+R ++P + +Q++  LK++SL + +G  +L   G
Sbjct: 117 RGLREAGLALGLPVWRVLAFVIGPVAIRRMVPAMGNQFIVSLKDTSLFIVIGVGELTRQG 176

Query: 354 GTIINQTGQAIEIILIWMFIYLSL 377
             I+    +A+EI +    IYL +
Sbjct: 177 QEIMAANFRAVEIWIAVAAIYLCM 200


>gi|290956975|ref|YP_003488157.1| glutamate uptake system [Streptomyces scabiei 87.22]
 gi|260646501|emb|CBG69598.1| glutamate uptake system [Streptomyces scabiei 87.22]
          Length = 295

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 64/98 (65%), Gaps = 1/98 (1%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +T   +  ++   L  Y A+ +AE+VR+G++A+P+GQ EAA A+GL   +    +LLPQA
Sbjct: 133 TTEQRQLWAVVAGLVLYNASVLAEVVRAGILALPKGQTEAAQAIGLRKGQTMSFILLPQA 192

Query: 320 MRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTI 356
           +  ++P + SQ + ++K+++L  V +GF +L+S   T+
Sbjct: 193 VTVMLPAIVSQLVVIVKDTALGGVMIGFTELLSGRATL 230


>gi|257869938|ref|ZP_05649591.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804102|gb|EEV32924.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 489

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 52/67 (77%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+  +AA++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 364 IALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQVQAMRFIIFPQAIKNILPALGNE 423

Query: 331 YLNLLKN 337
           ++ ++K 
Sbjct: 424 FVTVIKE 430



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 40/67 (59%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y    L G   T +LAF G++  +I G+L+   +LSA+K++ WI  VY+E  R  P L
Sbjct: 280 SKYLPFYLSGAGYTIFLAFVGVLFGSIAGSLLAFMKLSASKILRWIAIVYIEYVRGTPLL 339

Query: 143 VVIFFLY 149
           V IF +Y
Sbjct: 340 VQIFIVY 346


>gi|302550658|ref|ZP_07303000.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468276|gb|EFL31369.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
          Length = 300

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 33/236 (13%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-----FATRLSRHFHEKTGKALPLL 222
           G++LN R      L +   A + V   ++ I  +L     F  R     +    + LPL+
Sbjct: 89  GLWLNVR------LLLVCGAAVLVLGMLIAIARTLRGPVFFPLRALAAAYTDFFRGLPLI 142

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                ++ G+P     AL+ Q     PVL     +GG+           AL+   +A++A
Sbjct: 143 INLMIVVLGVP-----ALRLQGVTVDPVL-----LGGT-----------ALTLTYSAYVA 181

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+G+ +V   Q  AA +LGL++R+A R V+LPQA+R  +PPL +  ++L K++ L  
Sbjct: 182 EVFRAGIESVHPSQRAAARSLGLSNRQALRYVVLPQAVRRQVPPLLNDLVSLQKDTGLVS 241

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G  D V     I+ ++      I+  + ++++L+I +  F + + A++  +  +
Sbjct: 242 IGGAVDAVRAADIIVGRSLNYTPYIVAGL-VFVALTIPMTRFTDWVTARMDRRRAQ 296


>gi|165977040|ref|YP_001652633.1| ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165877141|gb|ABY70189.1| ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 217

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 19/171 (11%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 21  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 75  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +  R ++ PQA+R +IPPL++ ++ L K++SLA  V   ++  V   + N
Sbjct: 127 MQTFRWIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMAN 177


>gi|251788516|ref|YP_003003237.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537137|gb|ACT05758.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 218

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+PRGQ EA   LGLT  +    V+ PQ
Sbjct: 80  GIDVSP-WTAAALALTLFTSAFLVDIWHGSVQALPRGQWEACRCLGLTFTQTLTRVIAPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 186


>gi|254386080|ref|ZP_05001394.1| glutamate transporter permease [Streptomyces sp. Mg1]
 gi|194344939|gb|EDX25905.1| glutamate transporter permease [Streptomyces sp. Mg1]
          Length = 297

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 4/120 (3%)

Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           S+VS +   LY     L  Y +A IAEIVR+G+ ++PRGQ +AA A+G+   +    VL+
Sbjct: 131 SSVSSDLRPLYAVVTGLVLYNSAVIAEIVRAGVQSLPRGQADAAKAIGMRKGQTMVHVLI 190

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           PQA+ +++P L SQ + +LK+++L    +G A+L+S+   I       I    +   IY+
Sbjct: 191 PQAVTAMLPALVSQLVVILKDTALGGTLLGLAELLSMARQISANYSNTIATFTVIALIYI 250



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV-GFVNTFWLAF 101
           W  + V+  +    L   +G +SE+   E D+   P+ +DS   T  L+ G + T     
Sbjct: 18  WIYSGVFVVLFALVLWWALGLMSEKGQLEADK-WTPFVTDSDVWTTFLIPGLLETLKAGV 76

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             ++ A  +G L+G GRLS +  V      +VE FR IP L+++ F
Sbjct: 77  IAVVIALPLGALLGIGRLSDHAWVRVPVGAFVEFFRAIPVLMLMLF 122


>gi|167033609|ref|YP_001668840.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860097|gb|ABY98504.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 219

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 74/132 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I LS + A + A++++SG+ AV  GQ+E A ++GL+     R +++PQA+R  
Sbjct: 87  PALAAGIIGLSLHFAVYNADVIKSGIEAVDPGQIEGARSIGLSKAMTQRYIIVPQALRKT 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           I PL +  + LLK++SL   +G A+LV      +++T    E  +    IY   ++++  
Sbjct: 147 IAPLGNNLIVLLKDTSLVSIIGIAELVYSAQLAVSETYSPFEFYIAVAVIYYVANLVLEA 206

Query: 384 FMNRLNAKIALK 395
            ++ + AK+ + 
Sbjct: 207 GLHLIEAKVEMS 218


>gi|91787397|ref|YP_548349.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696622|gb|ABE43451.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 212

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ Y +A++ EI R  + A+ +GQ EA+ +L L++ +  R V+LPQA R  I P    
Sbjct: 91  ICLTLYASAYLTEIWRGCVNAIHKGQWEASTSLALSYTQQMRHVILPQAWRVAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K ++LA  +GF +L   G  I N T Q          +Y +L   ++ +  RL  
Sbjct: 151 LVQIIKGTALASVIGFVELTKAGQMISNATYQPFLAFTFVGLLYFALCYPLSWWSQRLEN 210

Query: 391 K 391
           +
Sbjct: 211 R 211


>gi|55820917|ref|YP_139359.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55822837|ref|YP_141278.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55736902|gb|AAV60544.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55738822|gb|AAV62463.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 213

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 57/91 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179


>gi|89898271|ref|YP_515381.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56]
 gi|89331643|dbj|BAE81236.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56]
          Length = 217

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 108/198 (54%), Gaps = 18/198 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG+V+    T  SR+F  +  + +  LY++  +I G P  + I + Y   F  P     
Sbjct: 31  LLGLVI---GTMTSRYFPCRITRWMGNLYVT--VIRGTPLFIQILIFY---FGLP----- 77

Query: 255 NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           + IG   V P   M+  IALS  ++A++AE +R G+ A+  GQ E+A  LG    +    
Sbjct: 78  SIIG---VDPTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFY 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++ PQ  ++I+P LT++++ L+K SS+ + VG  +L  V   I+++    +E+  I   +
Sbjct: 135 IIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSICAGL 194

Query: 374 YLSLSIMIALFMNRLNAK 391
           YL ++ + + +++RL  K
Sbjct: 195 YLFMTSLFS-YVSRLLEK 211


>gi|116627710|ref|YP_820329.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116100987|gb|ABJ66133.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 213

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 57/91 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLESRTAANRDA 179


>gi|257438672|ref|ZP_05614427.1| L-cystine ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
 gi|257198901|gb|EEU97185.1| L-cystine ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
          Length = 227

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 76/133 (57%), Gaps = 7/133 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA +    A+ AE +R  L +VP+GQ+EA   +G+T  +  R ++LPQA+R+ +P
Sbjct: 95  FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGSCVGMTWWQIMRRIVLPQALRTAVP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++  ++++K++SLA  +  A+L   G  +  +T        I++ IY  ++++  LF 
Sbjct: 155 SLSNSLISMIKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207

Query: 386 NRLNAKIALKEKK 398
             +    AL E++
Sbjct: 208 TIITKLQALVERQ 220


>gi|254386081|ref|ZP_05001395.1| glutamate transporter permease [Streptomyces sp. Mg1]
 gi|194344940|gb|EDX25906.1| glutamate transporter permease [Streptomyces sp. Mg1]
          Length = 224

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 52/83 (62%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG+     F    + L+ YT  F+ E +RSG+  VP GQ EAA ALGL+  +   L++LP
Sbjct: 85  GGTFKETGFRLAVLGLTAYTGTFVCEALRSGINTVPVGQAEAARALGLSFFQVLTLIVLP 144

Query: 318 QAMRSIIPPLTSQYLNLLKNSSL 340
           QA R++I PLT+  + L KN+++
Sbjct: 145 QAFRAVIAPLTNVLIALTKNTTV 167


>gi|85703853|ref|ZP_01034956.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. 217]
 gi|85671173|gb|EAQ26031.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. 217]
          Length = 429

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 57/82 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ +++A+IAE++R GL A+PRGQ EA  +LGL + ++ +L++LPQA++  IP + + 
Sbjct: 299 IMITMFSSAYIAEVIRGGLAALPRGQYEAGDSLGLDYAQSMQLIILPQALKISIPGIVNV 358

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
            + L K+++L   +   D+V +
Sbjct: 359 AVGLFKDTTLVSVISMFDIVGM 380


>gi|329770549|ref|ZP_08261927.1| hypothetical protein HMPREF0433_01691 [Gemella sanguinis M325]
 gi|328836298|gb|EGF85967.1| hypothetical protein HMPREF0433_01691 [Gemella sanguinis M325]
          Length = 214

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G+ ++P+GQ EAA  L     +  R ++LPQ ++ ++P + ++
Sbjct: 89  IAFTLNYAAYFAEIFRGGINSIPKGQYEAAKVLKFNQFQTIRFIILPQVIKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL  A+G +DL+    T  N+    + + +  M IYL L  ++ +   R+  
Sbjct: 149 IMSLVKDTSLVYALGISDLILASRTAANRDASLLPMFVAGM-IYLILIGIVTVVSKRVEK 207

Query: 391 K 391
           +
Sbjct: 208 R 208


>gi|331005100|ref|ZP_08328503.1| ABC polar amino acid transporter inner membrane protein [gamma
           proteobacterium IMCC1989]
 gi|330421069|gb|EGG95332.1| ABC polar amino acid transporter inner membrane protein [gamma
           proteobacterium IMCC1989]
          Length = 173

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 66/115 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F S  I LS YT+A +A++  SG+ AVP     A+ +LG+T+ +  R ++ P  +R++
Sbjct: 43  PAFWSGTIILSIYTSALVAQVALSGIEAVPLTTRRASRSLGMTYWQDMRYIVWPIGLRAV 102

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +P      L++LK+S+L   +G+ +L+     +I +T +   ++ +    Y +LS
Sbjct: 103 LPAWVGVALSVLKDSALVSVIGYTELLKASQILITRTAETFTVLAVAGLFYFALS 157


>gi|222081928|ref|YP_002541293.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726607|gb|ACM29696.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 217

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 10/170 (5%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P LVL+ L Y   F   +LG F+ +      P  ++    L  Y++ F+ EI R 
Sbjct: 58  IVQGTPLLVLLFLIY---FGIAILG-FDQV------PAIIAAAAGLIIYSSGFLGEIWRG 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VP+ Q EAA  L L+  +    V+LPQA+R   PP     + ++KN+SLA  VGF 
Sbjct: 108 CIESVPKTQWEAAECLALSRWQRMIKVILPQALRIATPPTVGFLVQIVKNTSLASVVGFV 167

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L   G  I N   +   + ++    Y ++   ++L+   L  K+ +  +
Sbjct: 168 ELSQAGKLINNSIFEPFTVFIVVAVFYFAMCFPLSLWSRNLERKLNVANR 217


>gi|160899041|ref|YP_001564623.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160364625|gb|ABX36238.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 360

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 3/128 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ ++AA++AE+ R GL AVP+GQ+ AA A+G T  +  R V+LPQA+R  I P  S 
Sbjct: 233 VCLAAFSAAYLAEVFRGGLQAVPQGQVMAAQAMGFTRVQVLRHVVLPQALRVTIAPTVSN 292

Query: 331 YLNLLKNSSLAVAVGFADL---VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++  +K++SL   V   D+   + +  +  +     +E+ ++   +YL + + IA +   
Sbjct: 293 FIGAVKDTSLVAIVNIYDITGSLKMAMSDPHWIAYFVEMYMVVCTVYLLIGLGIARYGRF 352

Query: 388 LNAKIALK 395
           L ++ AL+
Sbjct: 353 LESRYALQ 360


>gi|119383036|ref|YP_914092.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Paracoccus denitrificans PD1222]
 gi|119372803|gb|ABL68396.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 218

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 22/212 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V +FV G+       R+SRH      + L   YI  F      T + + L
Sbjct: 21  LTLMGSALALVVAFVAGL------GRISRH---AAVRWLATAYIEFFR----GTSIFVQL 67

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P       + G+ ++P   +  +AL     A+ AE+VR  ++AVPR Q EA 
Sbjct: 68  -FWIYFVLP-------MTGAELTP-MQAGVMALGLNVGAYGAEVVRGAILAVPRDQHEAC 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +A+ LT  +  R ++LPQA+  ++P   +  + LLK +S+   +  +D+      + +QT
Sbjct: 119 VAVNLTRFQRMRHIILPQALPLMLPTFGNNAIELLKATSVVSLISLSDMTFQAQVVRSQT 178

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +   +  + +Y ++S  ++  M RL  ++
Sbjct: 179 GSTLMPFVTILLLYFAMSSALSFGMRRLERRV 210



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y T IL+G   T  L   G   A ++  + G GR+S +  V W+   Y+E FR     
Sbjct: 5   AGYLTLILMGAWVTVKLTLMGSALALVVAFVAGLGRISRHAAVRWLATAYIEFFRGTSIF 64

Query: 143 VVIFFLY 149
           V +F++Y
Sbjct: 65  VQLFWIY 71


>gi|302558022|ref|ZP_07310364.1| glutamate permease [Streptomyces griseoflavus Tu4000]
 gi|302475640|gb|EFL38733.1| glutamate permease [Streptomyces griseoflavus Tu4000]
          Length = 300

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 77/127 (60%), Gaps = 1/127 (0%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  Y A+ +AE+VR+G++++P+GQ EAA A+GL   +    +LLPQA+  ++P + SQ 
Sbjct: 145 GLVLYNASVLAEVVRAGILSLPKGQGEAAQAIGLRKSQIMGNILLPQAVTVMLPAIVSQL 204

Query: 332 LNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + ++K+++L  V +GF +L++  GT+       +   ++   I++ L+ ++  F + L  
Sbjct: 205 VVIVKDTALGGVMLGFTELLNSRGTLAANYANVVPSFIVVAVIFIVLNFLLTSFASWLEG 264

Query: 391 KIALKEK 397
           ++   ++
Sbjct: 265 RLRRSKR 271


>gi|313125640|ref|YP_004035910.1| amino acid ABC transporter membrane protein, paat family
           [Halogeometricum borinquense DSM 11551]
 gi|312292005|gb|ADQ66465.1| amino acid ABC transporter membrane protein, PAAT family
           [Halogeometricum borinquense DSM 11551]
          Length = 277

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 73/127 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF +  IAL+   AA++ E VR G+ +VP GQMEAA +LG+++ ++ R V+LPQA R+ +
Sbjct: 143 EFPTAIIALTLNHAAYVGEAVRGGINSVPEGQMEAARSLGMSYIQSMREVILPQAWRNAL 202

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
             + +  + L+K++SL   +   +L+     + +        ++I    YLS++I +   
Sbjct: 203 AAIGNDQVILVKDTSLMTVIALPELIQQFRDVNSAVFDPWTPLVIVAIAYLSITIPLGKL 262

Query: 385 MNRLNAK 391
           ++ L  +
Sbjct: 263 VDHLENR 269


>gi|298346727|ref|YP_003719414.1| amino acid ABC transporter permease [Mobiluncus curtisii ATCC
           43063]
 gi|304389571|ref|ZP_07371533.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315655272|ref|ZP_07908173.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii ATCC 51333]
 gi|315656814|ref|ZP_07909701.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|298236788|gb|ADI67920.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii ATCC 43063]
 gi|304327124|gb|EFL94360.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315490527|gb|EFU80151.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii ATCC 51333]
 gi|315492769|gb|EFU82373.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 307

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 51/81 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  + L     A++AEIVR+GL +V  GQ EAA ALG+      R +++PQAMR I+P
Sbjct: 148 FWSAMLGLGLNEGAYLAEIVRAGLNSVNPGQWEAATALGMKRSMILRRIVIPQAMRVIVP 207

Query: 326 PLTSQYLNLLKNSSLAVAVGF 346
           P  ++ +++LK +SL   V F
Sbjct: 208 PTGNETISMLKTTSLVSVVPF 228


>gi|319942093|ref|ZP_08016412.1| hypothetical protein HMPREF9464_01631 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804477|gb|EFW01355.1| hypothetical protein HMPREF9464_01631 [Sutterella wadsworthensis
           3_1_45B]
          Length = 225

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 1/132 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + S  I  + +    + ++VR  LI++P+ Q E+A  LGL+  +  RLV+LPQA+R +IP
Sbjct: 92  YWSAIIVFTFWGTGEMGDLVRGALISIPKTQYESAQVLGLSKLQTMRLVVLPQAVRQLIP 151

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  +    ++K +SL V +G  +++  G  II+          +W++  + L   +A + 
Sbjct: 152 PSINLITRMIKTTSLVVLIGIVEVLKTGQQIIDANRFEYPTAALWVYGAVFLLYFLACWP 211

Query: 386 NRLNAKIALKEK 397
             L AK AL++K
Sbjct: 212 VSLAAK-ALEKK 222


>gi|331267078|ref|YP_004326708.1| ABC transporter, membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
 gi|326683750|emb|CBZ01368.1| ABC transporter, membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
          Length = 230

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 55/82 (67%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA +AE+ ++   A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++
Sbjct: 109 AAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           ++LA  +GF D++  G  +I++
Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190


>gi|307727665|ref|YP_003910878.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588190|gb|ADN61587.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 216

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 2/133 (1%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++   A+S  +A++IAEI+R G +++P G +EAA  LGL+     R +L+PQA R  
Sbjct: 85  PPLVAAISAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLSPFDTLRRILVPQAFRLT 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++ + L+K SSL   VG A+L      I   T + +E  +    IY  +   +AL
Sbjct: 145 LPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVICGALAL 204

Query: 384 FMNRLNAKIALKE 396
             +   A+  LK+
Sbjct: 205 VAH--AAEYRLKQ 215


>gi|237808616|ref|YP_002893056.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500877|gb|ACQ93470.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 520

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F N        L ++ +   ++   V G+VL+L     ++  H +    L   YI  +L
Sbjct: 11  LFQNQDFWDASLLVVELSVATWLGGIVFGMVLAL-----AKQSHYRPLSWLAGSYI--WL 63

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              LP LVLI   Y +        QF       +S  F +  +A+    +A+IAEI R G
Sbjct: 64  FRSLPLLVLIIFIYNV-------PQFVPSSSDLLSSPFTAGLLAMILSESAYIAEIHRGG 116

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L++V RGQ EA  ALG+      RL+++PQA +  +P L ++++ ++K +SL   +  A+
Sbjct: 117 LLSVHRGQTEAGRALGMRFIGIQRLIIIPQAFKIALPSLANEFVTIVKLTSLVSVISLAE 176

Query: 349 LVSVGGTIINQTGQAIEIIL 368
           ++ VG  +  Q  + +E +L
Sbjct: 177 ILMVGQRLYTQNFKVMETLL 196


>gi|160895677|ref|YP_001561259.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160361261|gb|ABX32874.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 217

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 77/136 (56%), Gaps = 1/136 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  +SP + +  I L+ YT+A++AE+ R  + ++P GQ EA+ +L + + +  R V+L
Sbjct: 79  MAGLDISP-WTAAAIGLTLYTSAYLAEVWRGCVESIPSGQWEASSSLAMGYLQQMRHVVL 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R  I P     + ++K +++A  +GF++L  +G  + N T Q   I  +    Y  
Sbjct: 138 PQALRLSIAPTVGFSVQIIKGTAVASIIGFSELTKLGSMLANATFQPFLIYGLVAAGYFL 197

Query: 377 LSIMIALFMNRLNAKI 392
           L   ++L+ + L  K+
Sbjct: 198 LCWPLSLYASHLEKKL 213


>gi|66046798|ref|YP_236639.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257505|gb|AAY38601.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330897283|gb|EGH28702.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330953617|gb|EGH53877.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
 gi|330972267|gb|EGH72333.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 232

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLGLTFILVRLF 216


>gi|328887002|emb|CCA60241.1| glutamate permease [Streptomyces venezuelae ATCC 10712]
          Length = 304

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 65/96 (67%), Gaps = 4/96 (4%)

Query: 260 STVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + +SPE   LY     L  Y A+ +AE+VR+G++A+P GQ +AA A+G+   +    VLL
Sbjct: 134 TDISPETRPLYAVVTGLVLYNASVLAEVVRAGILALPTGQTDAAKAIGMRKGQTMTYVLL 193

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVS 351
           PQ++ +++P L SQ + ++K+++L  A +GF++L++
Sbjct: 194 PQSVTAMLPALVSQLVVIVKDTALGGALLGFSELLA 229



 Score = 36.6 bits (83), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T    + T IL    NT   A   M+ A  +G L+G  RLS ++ V  +    VE FR 
Sbjct: 57  FTDGRVWDTYILPALKNTVIAAGLAMVIALPLGALLGVSRLSDHRSVRVVAGTVVEFFRA 116

Query: 139 IPPLVVIFF 147
           IP L+++ F
Sbjct: 117 IPVLILMLF 125


>gi|294670249|ref|ZP_06735142.1| glutamine/glutamate ABC transporter, permease protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
 gi|291307986|gb|EFE49229.1| glutamine/glutamate ABC transporter, permease protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
          Length = 251

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 63/105 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+   A+++AE +R+G++AVP+GQ+EA  A+GL   +  R V LPQA    +P + + 
Sbjct: 123 IALTFLGASYMAEALRAGILAVPKGQIEAGKAIGLNRFQIFRYVELPQAWAVAVPAIGAN 182

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            L L+K +S+  AVG A+L+ V   II    +  E + +    YL
Sbjct: 183 ILFLMKETSVVSAVGIAELLFVTKDIIGMDYKTNEALFLLFASYL 227


>gi|241206674|ref|YP_002977770.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860564|gb|ACS58231.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 222

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 34/204 (16%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRH----------FHEKTGKALPLLYISTFLIFGLPT 234
           T   + V + VLGIVLS+      R            + +  +  P L    F+ FGLP+
Sbjct: 23  TTLALTVSTSVLGIVLSILGAAARRGPYPWLRKVVGLYVEIMRNTPFLVQLFFIFFGLPS 82

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L                       G  + P   +  +A++   AA+  E+V +GL A+PR
Sbjct: 83  L-----------------------GIRLDP-ITAAVLAMTLNMAAYTIEVVGAGLDAIPR 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALGL  R     ++LPQA+  I P LTSQ + ++  S++   +   +L     
Sbjct: 119 GQKEAAQALGLRPRLVFFKIILPQAIAIIFPALTSQIIIMMLESAVVSQISVRELAQEAD 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378
            + ++T ++ E  L+   IYLS+S
Sbjct: 179 LLQSRTFRSFETYLVATLIYLSMS 202


>gi|126737935|ref|ZP_01753665.1| ABC-type amino acid transport system, permease component
           [Roseobacter sp. SK209-2-6]
 gi|126721328|gb|EBA18032.1| ABC-type amino acid transport system, permease component
           [Roseobacter sp. SK209-2-6]
          Length = 222

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 82/141 (58%), Gaps = 5/141 (3%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP +MS  IA+  + + +++E+ R G+ +VP+GQ EAAIAL +T  +  R V++PQ
Sbjct: 83  GIRLSP-WMSGMIAIGLHYSCYLSEVYRGGIDSVPKGQWEAAIALNMTTVQKYRRVIIPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ S +  + +  + + K++ +   +G A+L+     I ++  + +E   +   I+L++S
Sbjct: 142 AIPSALSGMGNYLVGIFKDTPMLSVIGVAELIHTANAIGSEHYRFLEPFTMVGIIFLAIS 201

Query: 379 I----MIALFMNRLNAKIALK 395
           +    +I L   R+  K+ LK
Sbjct: 202 LPAAGLIRLVEGRVRRKLGLK 222


>gi|120401318|ref|YP_951147.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119954136|gb|ABM11141.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 510

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 68/120 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +AL+   A FI+EI+RSG+  V  GQ  A  ALGL  RK  R V+ PQA RS+
Sbjct: 84  PPVAAGSVALAMNEAVFISEILRSGIKGVDPGQSLAGRALGLEPRKLMRRVIAPQAFRSM 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +++++ +KNS+LA  +   +L      + + T     I      +YL+L+ ++++
Sbjct: 144 VPALGNEFISTMKNSALASVIAVPELTLRTQQLASSTFDYFSIYFATAVMYLALTAVLSI 203


>gi|307257777|ref|ZP_07539534.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863683|gb|EFM95609.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 219

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    A+++AE +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + + 
Sbjct: 91  IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L L+K +S+  AV  A+L+ V   II    +  E + +    YL + + I+L       
Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|170694836|ref|ZP_02885986.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140196|gb|EDT08374.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 265

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 13/108 (12%)

Query: 259 GSTVSPEFMSLY---------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           G  ++P  +SL+         +AL+  ++A+IAEI RSG+ +V R QM A  ALG+T+  
Sbjct: 82  GQGLAPVGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRRQMSACQALGMTYWS 141

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVG 353
             R V++PQ +R I+P L +Q+++++K+SSL   +G      DL ++G
Sbjct: 142 GMRHVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIG 189


>gi|91778560|ref|YP_553768.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691220|gb|ABE34418.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 247

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 58/85 (68%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A+++  V +G+++V  GQ +AA++LGLT  +A R V+LPQA+R +
Sbjct: 94  PGLAAVVCALSLIGGAYLSHAVHAGIVSVGAGQQQAALSLGLTRWQALRYVVLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFAD 348
           +P   +Q+++L+K++SLA  VG  +
Sbjct: 154 MPSFVNQWVSLVKDTSLAYIVGVPE 178


>gi|88800985|ref|ZP_01116535.1| ABC-type arginine transport system, permease component [Reinekea
           sp. MED297]
 gi|88776252|gb|EAR07477.1| ABC-type arginine transport system, permease component [Reinekea
           sp. MED297]
          Length = 235

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 20/219 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LTM+  A   V +F LG++ ++   +LS++   +    +   Y  T +I G+P LV + L
Sbjct: 17  LTMELAALSLVLAFTLGLLGAM--GKLSKN---RMANGVATTY--TTIIRGVPDLVWMML 69

Query: 241 KYQLHFDKPVL--GQFNFIGGSTVSP--------EFMSLYIALSCYTAAFIAEIVRSGLI 290
              L+F   ++    F+++  +T           EF+S  + +     A++ E  R   +
Sbjct: 70  ---LYFGGQIMVNAFFDWLYNATDGQIDIFFPFNEFLSGVLTIGFIFGAYMTETFRGAFM 126

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ+EA  A G++  +  R +  PQ MR  +P + + +  LLK ++L   +G AD+V
Sbjct: 127 AVDAGQIEAGKAYGMSSWQIFRRISFPQMMRHALPGIANNWQVLLKTTALVSIIGLADMV 186

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +       TG+  +  +    +YL ++ +  +   +LN
Sbjct: 187 RLATEAAKSTGEPFKFFIPVAIVYLGIAALSDVLFKKLN 225


>gi|320323221|gb|EFW79309.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320329748|gb|EFW85737.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330881453|gb|EGH15602.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 232

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|239833797|ref|ZP_04682125.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821860|gb|EEQ93429.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 241

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 18/193 (9%)

Query: 204 ATRLSRHFHEK-TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           A +LSR +  +  G A    Y+S F   G P L+ +   + L+F  P +G         +
Sbjct: 66  AAKLSRFWPLRFIGAA----YVSVFR--GTPCLLQL---FVLYFGGPQIG-------INL 109

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F +  I L     A+ AE +R  ++ V  GQ EAA ++G +  ++ R V+LPQA R 
Sbjct: 110 EP-FAAGAIGLGLNIGAYYAEAMRGAILTVDAGQNEAARSIGFSSGQSMRFVVLPQAARL 168

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +I  L    + L+K S+L  A+   +L       I  T +  EI  I   IY+ L  ++A
Sbjct: 169 MIRSLGVNTVMLIKGSALVSAISVVELTYTAQRFIGSTYRPFEIFGIAAAIYMVLIYIVA 228

Query: 383 LFMNRLNAKIALK 395
            F++ L A+ ALK
Sbjct: 229 RFVDFLEARYALK 241


>gi|237799097|ref|ZP_04587558.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331021951|gb|EGI02008.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 232

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|307255512|ref|ZP_07537318.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307257682|ref|ZP_07539441.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307259963|ref|ZP_07541676.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861554|gb|EFM93542.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306863857|gb|EFM95781.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865991|gb|EFM97866.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 238

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 93/173 (53%), Gaps = 19/173 (10%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 96  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +  R ++ PQA+R +IPPL++ ++ L K++SLA  V   ++  V   + N +
Sbjct: 148 MQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMS 200


>gi|307299191|ref|ZP_07578992.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914987|gb|EFN45373.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 223

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 98/186 (52%), Gaps = 18/186 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++      V  F++G++L++     ++ FH   G A  ++ I    I G P LV +  
Sbjct: 21  VTLEMTLIAVVIGFIIGVILAIARVYGNKLFH---GVATAIIEI----IRGTPLLVQL-- 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + L++  P LG         +SP F +  I  +  +  + AE +R  + ++   QM+AA
Sbjct: 72  -FILYYGLPPLGM-------NLSP-FAAAIIGFAINSGCYQAEYLRGSIQSISGNQMKAA 122

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG+T  +A   +++PQA R +IP  T++++ LLK +SLA  VG  +L++    I ++ 
Sbjct: 123 RSLGMTKWQAILQIIMPQAFRRVIPAWTNEFIYLLKYTSLAYIVGAPELMAQAKFIASRN 182

Query: 361 GQAIEI 366
            Q  E+
Sbjct: 183 FQFFEV 188


>gi|307262179|ref|ZP_07543830.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306868156|gb|EFM99981.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 219

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    A+++AE +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + + 
Sbjct: 91  IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L L+K +S+  AV  A+L+ V   II    +  E + +    YL + + I+L       
Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|256784800|ref|ZP_05523231.1| glutamate permease [Streptomyces lividans TK24]
          Length = 205

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 76/126 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YT+AF+ E +RSG+  VP GQ EAA A+GL+  +  RLV+LPQA RS + PL + 
Sbjct: 80  LGLVLYTSAFVCEALRSGINTVPVGQAEAARAIGLSFGQVLRLVVLPQAFRSTVGPLANV 139

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+KN+++A A+G A+  ++   +I    Q + I  I    ++ L++   L +  +  
Sbjct: 140 LIALIKNTTVAAAIGVAEAAALMKDMIENEAQLLLISAIIAVGFVILTLPTGLILGWVGK 199

Query: 391 KIALKE 396
           K+A+K 
Sbjct: 200 KVAVKR 205


>gi|167563744|ref|ZP_02356660.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia oklahomensis EO147]
          Length = 219

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLVVA-IVRIGNNRILSAVAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRHVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    IY  LS ++A    R+  + AL
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215


>gi|295697136|ref|YP_003590374.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295412738|gb|ADG07230.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 214

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 71/128 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I LS Y  A+  E+ R+GL ++P  Q EA+ ALG++     R V+LPQA+ +I+P
Sbjct: 84  FTAAAIWLSAYGGAYAVELFRAGLHSIPHEQREASAALGISRWTTLRKVILPQALATILP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + S  +  +KNSSLA  +G  D++      +N T QA  + L+ +  Y  L+  ++   
Sbjct: 144 AMVSFLVLQVKNSSLAFTIGVMDIMRRAELGVNATSQATLLYLMAVAAYFILNFPLSRLG 203

Query: 386 NRLNAKIA 393
             L  ++A
Sbjct: 204 IALERRVA 211


>gi|302379711|ref|ZP_07268196.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3]
 gi|302312618|gb|EFK94614.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3]
          Length = 526

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P   +L+I +S  T A+++E+VR G+ +V  GQMEA  ALG+TH ++   V+LPQ
Sbjct: 376 GIDMAPISAALFI-VSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQ 434

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+++I+P + ++++  +K++S+   +   +L  V  +I   T    E   +   IY  L+
Sbjct: 435 AIKNILPSIGNEFVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLT 494


>gi|288961242|ref|YP_003451581.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913550|dbj|BAI75037.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 243

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 3/156 (1%)

Query: 227 FLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           F+  G P L+ L  + Y L   +P L +      S     +    +A++  TAA+ +EI+
Sbjct: 58  FVFRGTPLLIQLFMIYYGLGQFRPALQELGLW--SFFRDPYWCAVLAMAMNTAAYSSEII 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL +VP G +EAA A G+      R ++LP A+R  +P   ++ + + K +SLA  + 
Sbjct: 116 RGGLNSVPPGALEAASACGMRPLMRLRRIVLPLAIRQALPAYGNELVLMAKATSLASTIT 175

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  + G +I QT +A+EI      IYL+L+ ++
Sbjct: 176 LMEVTGLAGKMIAQTYRAVEIFACAGIIYLALTFIL 211


>gi|222102717|ref|YP_002539756.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221739318|gb|ACM40051.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 240

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 56/88 (63%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I+L      +  E++R  ++AV RGQ EAA A+GLT ++A  LV++PQ +   +P
Sbjct: 107 FIAAAISLGVVQGGYSTEVLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQMLPLALP 166

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            L + +L +LK SSL   +GF +LV VG
Sbjct: 167 GLGNLWLIVLKESSLVSLIGFTELVLVG 194


>gi|209516392|ref|ZP_03265248.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503154|gb|EEA03154.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 216

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 1/125 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP   ++     C +A++IAEI+R G +++P G +EAA  LGL+     R +L+PQ
Sbjct: 81  GINVSPAVAAISTVSLC-SASYIAEILRGGFLSIPPGHLEAARMLGLSPLDTLRRILVPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +P L ++ + L+K SSL   VG A+L      I   T + +E  +    IY  + 
Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVIC 199

Query: 379 IMIAL 383
             +AL
Sbjct: 200 GALAL 204


>gi|146284416|ref|YP_001174569.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145572621|gb|ABP81727.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
          Length = 231

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG+   I    +SP F +  IAL     A+  E+ R  L+A+P+G  EA +ALGL  R+ 
Sbjct: 82  LGELFGIANLALSP-FAAGTIALGLCFGAYATEVFRGALLAIPKGHREAGLALGLGKRRI 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQ  R  +P L + ++ L+K+++L   +G  +++      +  + +     L+ 
Sbjct: 141 FLRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFFLVA 200

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
            FIYL L+I+  + M+ L  +
Sbjct: 201 AFIYLCLTIVAMIGMHFLEKR 221


>gi|241205166|ref|YP_002976262.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240859056|gb|ACS56723.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 220

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 28/204 (13%)

Query: 190 FVFSFVLGIVLSL-----FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           F  +FV G++LSL     FA    R+F          LY++  ++ G+P   L+A+ + +
Sbjct: 34  FALAFVFGLLLSLCQKSSFAAL--RYFAA--------LYVT--IVRGVP---LLAVLFLI 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P +G         V   F +    L+   AA +AE+ R+GL A+P GQ EAA+A G
Sbjct: 79  YFGLPGVG--------IVLDAFGAAIAGLALCFAAQVAELFRAGLKAIPAGQSEAALAAG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  ++  L++LPQ  R I+ P+   +++LLK+SSLA  +   +LV  G ++  +    +
Sbjct: 131 FTPAQSFVLIILPQVARVILAPMIITFVSLLKDSSLASLITVNELVLTGRSMATEYFLPL 190

Query: 365 EIILIWMFIYLSLSIMIALFMNRL 388
           +I +     Y +++   ++   RL
Sbjct: 191 QIYIAVGLCYFAIAWPFSVLSRRL 214


>gi|104782330|ref|YP_608828.1| arginine/ornithine ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95111317|emb|CAK16037.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 232

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 18/204 (8%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           K+ + S   G+VL+  L   R+SR    +        ++ T++I G P LV      QL 
Sbjct: 24  KVLLISLACGLVLAIPLALMRVSRSCLLRVPA-----WLYTYVIRGTPMLV------QLF 72

Query: 246 FDKPVLGQFNFIGGSTVSPEFMS----LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                L QF  +  S + P   S      +A +  T+A+ AE++   L A PRG++EAA 
Sbjct: 73  LIYYGLAQFEAVRQSPLWPYLSSATFCTCLAFAINTSAYSAELLAGSLRATPRGELEAAR 132

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+G++     R +LLP A+R  +P  +++ L +L+ +SLA  V   D+     T   +  
Sbjct: 133 AMGMSRLTLYRRILLPSALRRALPQYSNEVLMMLQTTSLASIVTLVDITGAAKTFNARYY 192

Query: 362 QAIEIILIWMFIYLSLS-IMIALF 384
              E  +    IYL L+ I++ LF
Sbjct: 193 LPFEAFITAGLIYLVLTFILVRLF 216


>gi|271500408|ref|YP_003333433.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343963|gb|ACZ76728.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 224

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 9/115 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YTAA+  EI R+GL ++ + Q E A ALG+++  A R V+LPQ ++ ++P LT++
Sbjct: 96  LALTLYTAAYSTEIFRAGLQSMEQSQWEGAKALGMSYPLALRRVILPQVLQRMLPALTNR 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI---------ILIWMFIYLS 376
            + L K +SLA  +   +L+  G  + + T + +EI         +LIW   YL+
Sbjct: 156 LIELAKVTSLASMLAVNELMYQGRLLSSDTYRPLEILTVVALFYFVLIWPGSYLA 210


>gi|50842087|ref|YP_055314.1| ABC-type transporter, permease component [Propionibacterium acnes
           KPA171202]
 gi|289425866|ref|ZP_06427620.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|50839689|gb|AAT82356.1| ABC-type transporter, permease component [Propionibacterium acnes
           KPA171202]
 gi|289153809|gb|EFD02516.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|313763968|gb|EFS35332.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
 gi|313791624|gb|EFS39742.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
 gi|313802291|gb|EFS43517.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
 gi|313812555|gb|EFS50269.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
 gi|313814905|gb|EFS52619.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
 gi|313828070|gb|EFS65784.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
 gi|313839057|gb|EFS76771.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
 gi|314914998|gb|EFS78829.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
 gi|314918672|gb|EFS82503.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
 gi|314920477|gb|EFS84308.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
 gi|314932151|gb|EFS95982.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
 gi|314954583|gb|EFS98989.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
 gi|314958618|gb|EFT02720.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
 gi|314962350|gb|EFT06451.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
 gi|314968220|gb|EFT12319.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
 gi|315077436|gb|EFT49496.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
 gi|315080180|gb|EFT52156.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
 gi|315098943|gb|EFT70919.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
 gi|315100816|gb|EFT72792.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
 gi|315107245|gb|EFT79221.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
 gi|315108034|gb|EFT80010.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
 gi|327450117|gb|EGE96771.1| hypothetical protein HMPREF9581_02565 [Propionibacterium acnes
           HL087PA3]
 gi|327455156|gb|EGF01811.1| hypothetical protein HMPREF9584_01111 [Propionibacterium acnes
           HL092PA1]
 gi|327455329|gb|EGF01984.1| hypothetical protein HMPREF9586_01365 [Propionibacterium acnes
           HL083PA2]
 gi|328752782|gb|EGF66398.1| hypothetical protein HMPREF9579_02325 [Propionibacterium acnes
           HL087PA1]
 gi|328759296|gb|EGF72912.1| hypothetical protein HMPREF9588_00140 [Propionibacterium acnes
           HL025PA2]
          Length = 182

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +    V     +  I L     A++AEI RSGL +V  GQ EAA ALG+      R
Sbjct: 7   QFASVETEKVVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMR 66

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
             ++PQAMR IIPP  ++ + +LK +SL +A+ F  DL      I N T   I ++++  
Sbjct: 67  RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126

Query: 372 FIYLSLS 378
             YL ++
Sbjct: 127 CWYLVMT 133


>gi|71734665|ref|YP_275673.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|257482806|ref|ZP_05636847.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289650401|ref|ZP_06481744.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298488144|ref|ZP_07006181.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71555218|gb|AAZ34429.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157423|gb|EFH98506.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330988693|gb|EGH86796.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331012329|gb|EGH92385.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 232

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|107022692|ref|YP_621019.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116689641|ref|YP_835264.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105892881|gb|ABF76046.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647730|gb|ABK08371.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 241

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 17/165 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VLG+ L + A  L+R       + L L +I  F    +P L+LI   Y   F  PVL   
Sbjct: 42  VLGVALGI-AMALAR----GPARVLLLAFIGFFR--AIPVLMLIFWTY---FLMPVLLHM 91

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +  G +TV         AL+    A++A  V +G++A   GQ +A ++LGLT  +  R V
Sbjct: 92  DVPGLATV-------VCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYV 144

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           LLPQA+R + P   +Q++ L+K++SLA  VG  +L  +   + N+
Sbjct: 145 LLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFIATQVNNR 189


>gi|328947350|ref|YP_004364687.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328447674|gb|AEB13390.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 224

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 3/103 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  +A+    AA+ AEI R G+ ++P GQ EAA  LG T  +    +++PQ ++ II
Sbjct: 94  RFTAAIVAMVINYAAYFAEIYRGGIQSIPFGQYEAAKVLGFTKNQTFFRIIIPQVVKRII 153

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           PP+ ++ + L+K+++L   +G A+L  V  T   Q+G+ + ++
Sbjct: 154 PPMGNEVITLVKDTALVQVLGVAELFHVAQT---QSGRLVSVM 193


>gi|261820367|ref|YP_003258473.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261604380|gb|ACX86866.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 237

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 14/142 (9%)

Query: 257 IGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           I G+  S P+++   +AL+   + + +EIVR GL ++P  Q EAA AL     + T  ++
Sbjct: 93  IAGTWFSFPDWVKAVVALAIPVSGYTSEIVRGGLKSIPTTQWEAAAALAFGTVRTTLTII 152

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--------AIEII 367
           LPQA+R ++PP  + Y +++  +SLA  VG  +++++  TI+    +        +I +I
Sbjct: 153 LPQAIRQMVPPTMNLYCSVVMATSLANVVGVQEVMTITQTILTTETRPGLILPAYSITLI 212

Query: 368 LIWMFIYLSLSIMIALFMNRLN 389
           L + F++      I+LF  RL 
Sbjct: 213 LFFAFVF-----PISLFSRRLE 229


>gi|225378641|ref|ZP_03755862.1| hypothetical protein ROSEINA2194_04309 [Roseburia inulinivorans DSM
           16841]
 gi|225209478|gb|EEG91832.1| hypothetical protein ROSEINA2194_04309 [Roseburia inulinivorans DSM
           16841]
          Length = 247

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 22/213 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + + ++G++L+L  T+      +  G     +YIS  LI G P +V + + Y   F  P+
Sbjct: 33  IIALIIGMLLALIKTKNIPLLKQIAG-----VYIS--LIRGTPVIVQLYIAY---FGIPM 82

Query: 251 LGQFNFIGG-----STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           + ++ +        S+ +  F+   IALS   +A+IAEI R  L +V  GQ+EAA A+G+
Sbjct: 83  ITKYIYQQNGWNYQSSTTSGFVYAIIALSINESAYIAEIFRGALASVNVGQIEAASAIGM 142

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +    ++ P+ +   +P L + ++ L+K +SLA      ++ + G  I  +T +  E
Sbjct: 143 TYFQTFCRIIFPEMLSVALPGLGNSFIGLIKGTSLAFVCAVVEMTAQGKIIGGRTYRYFE 202

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                  +Y+SL+I+  +    +   I L EKK
Sbjct: 203 -------VYVSLAIIYWVITFVIEQGIRLIEKK 228


>gi|213614416|ref|ZP_03371242.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 178

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 18/158 (11%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           R  +LPQA R  +PPL++ +++L+K++SLA  +   +L
Sbjct: 134 RRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPEL 171



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|306825910|ref|ZP_07459249.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432271|gb|EFM35248.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 230

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 55/82 (67%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA +AE+ ++   A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++
Sbjct: 109 AAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           ++LA  +GF D++  G  +I++
Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190


>gi|327482801|gb|AEA86111.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 231

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG+   I    +SP F +  IAL     A+  E+ R  L+A+P+G  EA +ALGL  R+ 
Sbjct: 82  LGELFGIANLALSP-FAAGTIALGLCFGAYATEVFRGALLAIPKGHREAGLALGLGKRRI 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQ  R  +P L + ++ L+K+++L   +G  +++      +  + +     L+ 
Sbjct: 141 FLRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFFLVA 200

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
            FIYL L+I+  + M+ L  +
Sbjct: 201 AFIYLCLTIVAMIGMHFLEKR 221


>gi|306828836|ref|ZP_07462028.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304429014|gb|EFM32102.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 230

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 55/82 (67%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA +AE+ ++   A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++
Sbjct: 109 AAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           ++LA  +GF D++  G  +I++
Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190


>gi|303234492|ref|ZP_07321129.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
 gi|302494326|gb|EFL54095.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
          Length = 526

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P   +L+I +S  T A+++E+VR G+ +V  GQMEA  ALG+TH ++   V+LPQ
Sbjct: 376 GIDMAPISAALFI-VSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQ 434

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+++I+P + ++++  +K++S+   +   +L  V  +I   T    E   +   IY  L+
Sbjct: 435 AIKNILPSIGNEFVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLT 494


>gi|225352765|ref|ZP_03743788.1| hypothetical protein BIFPSEUDO_04395 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156372|gb|EEG69941.1| hypothetical protein BIFPSEUDO_04395 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 225

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R+    + +  K LPL  I  F++ G             
Sbjct: 29  LFSTILGVILVMMRISPVASLRMVSGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EA  AL
Sbjct: 76  -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEACRAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361
           GL   ++   ++LPQA R  + PL +  + LLKNS++A A   A   S  +   I  ++ 
Sbjct: 131 GLNFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEYRSD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             + I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 191 VIVPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|190151021|ref|YP_001969546.1| aino acid ABC transporter permease [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264380|ref|ZP_07545967.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|189916152|gb|ACE62404.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|306870267|gb|EFN02024.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 219

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    A+++AE +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + + 
Sbjct: 91  IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L L+K +S+  AV  A+L+ V   II    +  E + +    YL + + I+L       
Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|116254852|ref|YP_770688.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259500|emb|CAK10638.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 229

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A GL+     R + LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWMLIRRIWLPRAIRIALPTIAGEIVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +L+    YL+L+ +IA     L A++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRSLEAQVPVRR 229


>gi|319782289|ref|YP_004141765.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168177|gb|ADV11715.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 359

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 12/125 (9%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEIVR G+  V  GQ EAA+ALG+ + +    +LLPQAMR+ +P   +Q++   K 
Sbjct: 237 SAYQAEIVRGGMQGVATGQEEAAMALGMRYWQRISRILLPQAMRNAMPATINQFVISFKE 296

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRLNAKIA 393
           +SL V VGF ++++ G      TG+       W F Y+ +   IA    +F+  L+   A
Sbjct: 297 TSLVVIVGFFEILASGNAAYG-TGE-------WRFAYVEVYAFIAFIYFIFVFSLSRYGA 348

Query: 394 LKEKK 398
             E++
Sbjct: 349 FLERR 353


>gi|315930623|gb|EFV09650.1| L-cystine transport system permease protein TcyB [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 141

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S YT++ +AEI+R GL ++P+GQ EAA + G         ++LPQ  R IIP L SQ
Sbjct: 13  IGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQ 72

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIAL 383
            +  +K+++    +G A+L     TI+ +     EI+        I+  I  SLS+++  
Sbjct: 73  IVTTVKDTAYLAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRY 132

Query: 384 FMNR 387
           +  +
Sbjct: 133 YAKK 136


>gi|152977983|ref|YP_001343612.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
 gi|150839706|gb|ABR73677.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 238

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 19/206 (9%)

Query: 193 SFVLGIVLSLFA-----TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+++++       T ++   H  T  AL  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMIIAVGVALIRITPVTGVLHRIT-LALVKIYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G F       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+ +
Sbjct: 96  LPAIGIF-------IDP-IPAAIIGFSLNIGAYASETVRAAISSVPKGQWEAGYTIGMNY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++ PQA R  +PPL++ ++ L K++SLA  V   ++  V   + N +   + + 
Sbjct: 148 MQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    +Y     ++     RL  ++A
Sbjct: 208 IEAGLVYWCFCWILFFIQARLEKRMA 233


>gi|126437886|ref|YP_001073577.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126237686|gb|ABO01087.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 489

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 14/151 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SF +G+V++L    L+R         +   YIS  +I G P LV +   + + F  P 
Sbjct: 296 VISFAIGLVIAL-GVALARLSPNVVLTNVARFYIS--IIRGTPLLVQL---FIVFFALP- 348

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             +F    G  + P F +  IA S     + AEI+RS ++++P+GQ EAA  +G+ +  +
Sbjct: 349 --EF----GIRIDP-FPAAVIAFSLNVGGYAAEIIRSAILSIPKGQWEAAETIGMNYPTS 401

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            R ++LPQA R  +PPL++  ++L+K++SLA
Sbjct: 402 LRRIVLPQAARVAVPPLSNTLISLVKDTSLA 432


>gi|325062906|gb|ADY66596.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           sp. H13-3]
          Length = 601

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 3/133 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   AAF +EIVR G+++V +GQ+EAA ALGL  R+    ++LPQAMRSI+P
Sbjct: 167 FAAAVLGLTLNQAAFASEIVRGGILSVDQGQLEAAAALGLPRRRQASRIVLPQAMRSILP 226

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIA 382
              +  + L K +S    +   +L      I  +  + I +++   +W  + L+   ++ 
Sbjct: 227 TAFNDIIGLAKGTSQVYILALPELFYTIQIIYRRNLEVIPLLMVATVWYLVILTALSIVQ 286

Query: 383 LFMNRLNAKIALK 395
             + R  ++ AL+
Sbjct: 287 HHIERHFSRGALR 299


>gi|296156736|ref|ZP_06839574.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893335|gb|EFG73115.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 226

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 12/158 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL +L++S  LI G P L+ + + Y   +  P L   N     ++SP    +  AL+C 
Sbjct: 55  RALVVLWVS--LIRGTPALIHMLIAY---YMVPAL--LNI----SISPVTAGIA-ALACN 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+I EI+R  L  +  GQ  A  ALG+   +  R VLLPQ +   IPPLTS++  LLK
Sbjct: 103 TSAYIVEILRGSLGTISWGQRAAGYALGMRTAQVWRHVLLPQMIYRAIPPLTSEFTLLLK 162

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            SSL   +   +L +V      QT   +++  I   +Y
Sbjct: 163 ASSLMSIIAVPELATVARNATLQTDLPLQVFTITAAVY 200


>gi|293364295|ref|ZP_06611021.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307702739|ref|ZP_07639691.1| nopaline transport system permease protein nocM [Streptococcus
           oralis ATCC 35037]
 gi|315612440|ref|ZP_07887353.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|322374986|ref|ZP_08049500.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|291317141|gb|EFE57568.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307623855|gb|EFO02840.1| nopaline transport system permease protein nocM [Streptococcus
           oralis ATCC 35037]
 gi|315315421|gb|EFU63460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|321280486|gb|EFX57525.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 230

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 55/82 (67%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA +AE+ ++   A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++
Sbjct: 109 AAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           ++LA  +GF D++  G  +I++
Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190


>gi|259046945|ref|ZP_05737346.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Granulicatella adiacens ATCC 49175]
 gi|259036388|gb|EEW37643.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Granulicatella adiacens ATCC 49175]
          Length = 218

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 21/184 (11%)

Query: 228 LIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG--STVSPEFMSLY 270
           LIF +P  +LIA   QL +                 P+L Q  FI     +V      L 
Sbjct: 31  LIFSIPLGILIAFAMQLKWKPLNWLIHIYIWVMRGTPLLLQLIFIYYVLPSVGIRLDRLP 90

Query: 271 IALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            AL  +T   AA+ AEI R G+  +P+GQ EAA  L  T     R ++LPQ  + ++P +
Sbjct: 91  AALIAFTLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFTPGATIRYIVLPQVTKIVLPSV 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ ++L+K++SL  A+G +DL+    T  N+    + + L    IYL +  ++ L   R
Sbjct: 151 FNEIMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-IYLIVIGVVTLVAKR 209

Query: 388 LNAK 391
           +  K
Sbjct: 210 IEKK 213


>gi|108801905|ref|YP_642102.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119871057|ref|YP_941009.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108772324|gb|ABG11046.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. MCS]
 gi|119697146|gb|ABL94219.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 489

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 14/151 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SF +G+V++L    L+R         +   YIS  +I G P LV +   + + F  P 
Sbjct: 296 VISFAIGLVIAL-GVALARLSPNVVLTNVARFYIS--IIRGTPLLVQL---FIVFFALP- 348

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             +F    G  + P F +  IA S     + AEI+RS ++++P+GQ EAA  +G+ +  +
Sbjct: 349 --EF----GIRIDP-FPAAVIAFSLNVGGYAAEIIRSAILSIPKGQWEAAETIGMNYPTS 401

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            R ++LPQA R  +PPL++  ++L+K++SLA
Sbjct: 402 LRRIVLPQAARVAVPPLSNTLISLVKDTSLA 432


>gi|330468470|ref|YP_004406213.1| polar amino acid ABC transporter inner membrane subunit
           [Verrucosispora maris AB-18-032]
 gi|328811441|gb|AEB45613.1| polar amino acid abc transporter, inner membrane subunit
           [Verrucosispora maris AB-18-032]
          Length = 260

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 74/126 (58%), Gaps = 5/126 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+I EI RSG+ +V   Q+EAA ALG +  +A R V++PQ +R I+P   +Q
Sbjct: 106 LALSLIASAYIGEIFRSGIQSVEATQLEAARALGFSWGEAMRRVIIPQGIRRILPAWVNQ 165

Query: 331 YLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L+K+SSL   +G      +L  +G      TG    ++L  +F YL+L++ +   +N
Sbjct: 166 LIALIKDSSLVYFLGLLASQRELFRIGQDYAANTGNQSALLLAGLF-YLALTVPLTHVVN 224

Query: 387 RLNAKI 392
            ++ ++
Sbjct: 225 WIDRRL 230



 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 30/60 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I VG  NT  LA +  +  + +G ++    +S  + + W  RVY +VFR +P    I  +
Sbjct: 25  ITVGLPNTLILAVTAALLGSALGIVLAVAGISRTRWLRWPARVYTDVFRGLPAAATILLI 84


>gi|260461009|ref|ZP_05809258.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033043|gb|EEW34305.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 230

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 63/123 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S    AF  EI R  + A+P+GQ EAA ALG    +  RLV++PQA+R ++PP    
Sbjct: 92  VTFSLNGGAFFGEIFRGAIEAIPKGQWEAATALGFRFVRTLRLVIIPQAVRLMLPPTVGF 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K +S+A  +G  +L      +   T Q + +      IY +L   ++L+   L  
Sbjct: 152 MVQIVKTTSIASLIGLTELARAATQVNTVTFQPVMVFGTVSIIYFALCWPLSLYAGYLER 211

Query: 391 KIA 393
           + A
Sbjct: 212 RFA 214


>gi|165977126|ref|YP_001652719.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877227|gb|ABY70275.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 219

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    A+++AE +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + + 
Sbjct: 91  IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L L+K +S+  AV  A+L+ V   II    +  E + +    YL + + I+L       
Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|241895708|ref|ZP_04783004.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871075|gb|EER74826.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 214

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 53/90 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  +      AA+ AEI R G+ ++P GQ + A  LGL+  +  R ++LPQ  + +
Sbjct: 83  PRFEAAVVTFILNYAAYFAEIFRGGIQSIPDGQYDGAKVLGLSKFQTMRKIVLPQVFKIV 142

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +P + ++ +NL+K+SSL   +G  DL+  G
Sbjct: 143 MPSMGNEVVNLVKDSSLVYVIGLGDLMRAG 172


>gi|317403050|gb|EFV83587.1| glutamine transport system permease [Achromobacter xylosoxidans
           C54]
          Length = 218

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 10/165 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P +V +   Y   F  P+L          V  E+ ++ + L   + A+I+EIVR 
Sbjct: 61  VIRGTPIVVQVMFIY---FALPLLANIR------VDAEWAAI-VTLIINSGAYISEIVRG 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L++V +G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK+SSL + +G A
Sbjct: 111 SLLSVHKGLKEAGQAMGLPFHKILFHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVA 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   G  I+    +A+EI      +YL L+  +AL ++ +  ++
Sbjct: 171 ELTRQGQEIMASNFRAVEIWSAIAIVYLILTGTMALILHLVEKRM 215


>gi|310766723|gb|ADP11673.1| Putative amino acid ABC transporter, permease protein [Erwinia sp.
           Ejp617]
          Length = 218

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+CYT+AF+ +I    + A+P+GQ EA   LGL+  +    V+LPQ
Sbjct: 80  GIDLSP-WTAAALALTCYTSAFLVDIWYGSIRALPKGQWEACRCLGLSTGQTLFRVVLPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 ALRIAIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 186


>gi|56697508|ref|YP_167876.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56679245|gb|AAV95911.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 267

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 1/125 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+LS +  AF  EI RSG+ AVP   +EA+ ALG+T  +    V+LP A R  +P L + 
Sbjct: 138 ISLSFFAGAFNVEIFRSGIEAVPDATIEASEALGMTRLQTYSHVILPLAFRVSLPALNNN 197

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-IYLSLSIMIALFMNRLN 389
            +NL+K ++ A A+   +L+    TI N    A    ++ +F +Y+ L  ++ L MNR  
Sbjct: 198 LVNLIKTTTQAFAIAVPELLYQAVTIWNDYPSAQYPAMLLLFVVYIGLVGIMVLGMNRWE 257

Query: 390 AKIAL 394
             +A+
Sbjct: 258 RHLAI 262


>gi|311107900|ref|YP_003980753.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 15 [Achromobacter
           xylosoxidans A8]
 gi|310762589|gb|ADP18038.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 15
           [Achromobacter xylosoxidans A8]
          Length = 230

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 8/121 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I   Y +++  P+L     + G+    E +   +A++ + AA+++EI+R G+ +V
Sbjct: 71  PLLVQI---YLVYYAVPML-----VPGAKGWSEMLLGIMAMTLHHAAYMSEIIRVGIESV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ+E A A G+ + +  R V+LPQA  + +PPL  Q   L+K++SL   +   +LV+ 
Sbjct: 123 PRGQIEGAKACGMNYGQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSLITVFELVAA 182

Query: 353 G 353
           G
Sbjct: 183 G 183


>gi|290961303|ref|YP_003492485.1| binding-protein-dependent ABC transporter transmembrane protein
           [Streptomyces scabiei 87.22]
 gi|260650829|emb|CBG73946.1| putative binding-protein-dependent transport system transmembrane
           subunit [Streptomyces scabiei 87.22]
          Length = 305

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 22/182 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+     ++ G+P     AL+ Q     PVL     +GG+           AL+  
Sbjct: 142 RGLPLIINLMIVVLGVP-----ALRLQGVTVDPVL-----LGGT-----------ALTLT 180

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+ R+G+ +V   Q  AA +LGLT+R+A R V+LPQA+R  +PPL +  ++L K
Sbjct: 181 YSAYVAEVFRAGIESVHPSQRAAARSLGLTNRQALRHVVLPQAVRRQVPPLLNDLVSLQK 240

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++ L    G  D V     I+ ++      I+  + ++++L+I +  F + + A++  + 
Sbjct: 241 DTGLVSIGGAIDAVRAADIIVGRSLNYTPYIVAGL-VFVALTIPMTRFTDWVTARMDRQR 299

Query: 397 KK 398
            +
Sbjct: 300 AQ 301


>gi|167760761|ref|ZP_02432888.1| hypothetical protein CLOSCI_03146 [Clostridium scindens ATCC 35704]
 gi|167661648|gb|EDS05778.1| hypothetical protein CLOSCI_03146 [Clostridium scindens ATCC 35704]
          Length = 221

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 25/187 (13%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFM 267
           E   KALP+    T + F L  ++ I +    +F  P+L +      +F  G+ + P+  
Sbjct: 11  EAMMKALPVTLSLTGISFTLALVLAILIAIVEYFKVPILDRIFSLYVSFFRGTPLIPQLF 70

Query: 268 SLY--------------------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            LY                    + L+  +AA++ E+VR  L++VP GQ EAA+A G++ 
Sbjct: 71  LLYFGIPTFVPALRNVSAYSVCVVGLTLNSAAYMKEVVRGSLLSVPEGQKEAALAHGMSS 130

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    ++LPQA R  IP L +  ++++K +S+A  +G  ++ +        T    E  
Sbjct: 131 MQTMFRIVLPQAARVAIPSLFNNLVDIVKGTSMAFTIGVIEITAAANLRAAVTFNYFEAY 190

Query: 368 LIWMFIY 374
           ++ M +Y
Sbjct: 191 MVLMLLY 197


>gi|298485705|ref|ZP_07003784.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298159731|gb|EFI00773.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 198

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAMR+IIPP T+Q
Sbjct: 69  IALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLPQAMRTIIPPTTNQ 128

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 129 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 187


>gi|70731861|ref|YP_261603.1| arginine/ornithine transport system permease aotM [Pseudomonas
           fluorescens Pf-5]
 gi|68346160|gb|AAY93766.1| arginine/ornithine transport system permease protein aotM
           [Pseudomonas fluorescens Pf-5]
          Length = 232

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|67459548|ref|YP_247172.1| amino acid ABC transporter permease [Rickettsia felis URRWXCal2]
 gi|75536048|sp|Q4UKC4|GLNP_RICFE RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|67005081|gb|AAY62007.1| Amino acid ABC transporter permease protein [Rickettsia felis
           URRWXCal2]
          Length = 218

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 88/166 (53%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F  V+G++L++       A RL  +F+    +  PLL   + + F  P +  I +K+ +
Sbjct: 31  IFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPYI--IGVKFSV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                FM+  I+ S  + A+++E++R+G+ AV +GQ EAA+AL 
Sbjct: 89  ---------------------FMAGAISFSLNSGAYVSEVIRAGINAVDKGQFEAAVALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +      + ++LPQA+++I P L ++ +NL+K S++   +G  DL+
Sbjct: 128 IPKFLIMKDIILPQAVKNIFPSLVNELVNLVKESAIISMLGEMDLM 173


>gi|319408774|emb|CBI82431.1| glutamate/aspartate transport system permease protein [Bartonella
           schoenbuchensis R1]
          Length = 238

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 5/206 (2%)

Query: 193 SFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           S++L G++ S+F T  +  F    G  L ++ +S+  +F    ++ I     +     +L
Sbjct: 32  SYILPGLLFSVFLTLFATIFGLIFGILLAMMRLSSIKLFSSLAVIYITAMRSIPLVMVIL 91

Query: 252 GQF---NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             F    F+ G+++     +L I  + + AA+ AEI+R+GL ++P+GQ  A  ALG+T+ 
Sbjct: 92  WFFVLLPFLTGTSIGANKSAL-ITFTAFEAAYFAEIMRAGLSSIPQGQKYAGQALGMTYW 150

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +   +VLLPQA R+++P   +Q + L ++++L  A+    L++    + N  G   E  +
Sbjct: 151 QNMYIVLLPQAFRNMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIVSNNFGVKQEAYI 210

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
           +    Y ++   ++  +  L  KI++
Sbjct: 211 LAAIFYFAICFTLSQVVLYLQKKISI 236


>gi|283784570|ref|YP_003364435.1| glutamine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282948024|emb|CBG87588.1| glutamine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 219

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 76/129 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++P
Sbjct: 90  FSAAVITIMINSGAYIAEITRGSVLSIHKGFSEAGLALGLSRRETIRHVIMPLALRRMLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q +  +K++SL + +G A+L   G  II    +A+EI      +YL ++ ++ + +
Sbjct: 150 SLGNQLIISIKDTSLFIVIGAAELTRSGQEIIAGNFRALEIWTAVGVVYLIITQVLNIVL 209

Query: 386 NRLNAKIAL 394
             L  ++ +
Sbjct: 210 RSLERRMKI 218


>gi|121610411|ref|YP_998218.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121555051|gb|ABM59200.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 249

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 53/83 (63%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S+ + L  +  A++++ +R+G+ A+ RGQ EAA A+G  H  A R V+ PQAMR++ P
Sbjct: 96  FTSVLVTLVIFNGAYLSQTIRAGMQALHRGQYEAARAMGFGHLAALRRVVGPQAMRNVTP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFAD 348
            +  Q + L+K +SL   +G A+
Sbjct: 156 SIVGQLVILIKETSLGSLIGLAE 178


>gi|330820138|ref|YP_004349000.1| ABC-type amino acid transport system, permease component
           [Burkholderia gladioli BSR3]
 gi|327372133|gb|AEA63488.1| ABC-type amino acid transport system, permease component
           [Burkholderia gladioli BSR3]
          Length = 216

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 59/97 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  + L+ +T+A++AEI R  + AVPRGQ EA+ +L +++ +  R V+LPQA R  
Sbjct: 84  PPWVAATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQAARIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           + P     +  +K+++L   +GF +L   G  I N T
Sbjct: 144 VGPTVGFGVQAVKDTALVSIIGFTELTRAGTVISNAT 180


>gi|289626773|ref|ZP_06459727.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289648366|ref|ZP_06479709.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|330868474|gb|EGH03183.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 277

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 74/119 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V +PQAMR+IIPP T+Q
Sbjct: 148 IALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIFWRVTVPQAMRTIIPPTTNQ 207

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI + L  +RL 
Sbjct: 208 FISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIGLELLQSRLE 266


>gi|260662607|ref|ZP_05863502.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|260553298|gb|EEX26241.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 462

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 23/177 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P++ ++ F+  G+P+++                      G  + P F +  + L   
Sbjct: 309 RGMPMIVLAFFIYIGMPSVI----------------------GHKI-PLFTAGILTLMLD 345

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+I  IV+ G  AV RGQ EAA +LGL + KA   V++PQ ++ ++P L +Q +  LK
Sbjct: 346 EGAYIGAIVKGGFQAVDRGQWEAARSLGLPYYKALVKVIMPQGIKIMVPSLVNQLIITLK 405

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++S+  A+G  +L   G  II Q  +  ++ LI   IY+ +  ++    N +  K+A
Sbjct: 406 DTSILSAIGVMELTQTGTVIIAQNMEGFKMWLIIGVIYIIIITLLTWLSNYVQRKMA 462


>gi|295400465|ref|ZP_06810443.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312112430|ref|YP_003990746.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|294977368|gb|EFG52968.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311217531|gb|ADP76135.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 234

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 11/206 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I   S V GIV+ + A  + R F       L ++Y+S   I G P L+ + L   + + 
Sbjct: 26  QILAVSTVFGIVIGI-AAAIPRLFRIPILSQLVVVYVS--FIRGTPILIQLFL---IFYG 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L     I  + + P +  + I  S    A  +EI R  + A+  GQ EAA ++G++ 
Sbjct: 80  VPALFLLFDIDLTRMDPLYFVM-ITYSLSNGAVFSEIFRGAIQAIDYGQTEAAYSVGMSD 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    +++PQA+    P + +  ++ LK++SLA  +G  D+V  G T+I  T  A+E+ 
Sbjct: 139 SQTFFRIIIPQAIGIAFPNMANCIISSLKDTSLAFTIGVMDMVGRGETLIASTAHALEVY 198

Query: 368 ----LIWMFIYLSLSIMIALFMNRLN 389
               +I+  + L L  +  LF  R+N
Sbjct: 199 ISLSIIYYIVVLVLEKLFRLFEKRVN 224


>gi|167895469|ref|ZP_02482871.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 7894]
 gi|167920093|ref|ZP_02507184.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei BCC215]
 gi|254196113|ref|ZP_04902538.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei S13]
 gi|169652857|gb|EDS85550.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei S13]
          Length = 219

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    + + L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTAAGI-LTLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    IY  LS ++A    R+  + AL
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F +Y  
Sbjct: 17  GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                 +PD       G+ L+       TLT++  A
Sbjct: 77  ------LPD------IGISLDPTAAGILTLTLNAGA 100


>gi|169824809|ref|YP_001692420.1| amino acid ABC transporter permease [Finegoldia magna ATCC 29328]
 gi|167831614|dbj|BAG08530.1| amino acid ABC transporter permease protein [Finegoldia magna ATCC
           29328]
          Length = 526

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P   +L+I +S  T A+++E+VR G+ +V  GQMEA  ALG+TH ++   V+LPQ
Sbjct: 376 GIDMAPISAALFI-VSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQ 434

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+++I+P + ++++  +K++S+   +   +L  V  +I   T    E   +   IY  L+
Sbjct: 435 AIKNILPSIGNEFVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLT 494


>gi|331085656|ref|ZP_08334739.1| hypothetical protein HMPREF0987_01042 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406579|gb|EGG86084.1| hypothetical protein HMPREF0987_01042 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 215

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 84/148 (56%), Gaps = 8/148 (5%)

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F    L Q N IGG  ++    ++ +  S   AA+ AEI RSG+ ++P+GQ EAA  LG
Sbjct: 70  YFAPYYLWQMN-IGGYKLT----AILLGCSLNYAAYFAEIYRSGIESIPKGQYEAAALLG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            + ++    ++LPQ +++++P +T++ + L+K++SL  ++ + ++ +V   I       +
Sbjct: 125 YSRQQTFLRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQIAAAQTTVV 184

Query: 365 EIILIWMFIYL---SLSIMIALFMNRLN 389
              +  +F Y+   +++  + LF  +LN
Sbjct: 185 PFFIAGVFYYIFNYAVAWGMELFEKKLN 212


>gi|307250982|ref|ZP_07532908.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306857010|gb|EFM89140.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    A+++AE +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + + 
Sbjct: 91  IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L L+K +S+  AV  A+L+ V   II    +  E + +    YL + + I+L       
Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|294635975|ref|ZP_06714417.1| L-cystine ABC transporter, permease protein [Edwardsiella tarda
           ATCC 23685]
 gi|291090704|gb|EFE23265.1| L-cystine ABC transporter, permease protein [Edwardsiella tarda
           ATCC 23685]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 70/124 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R  +++VPRGQ EAA A+G++  +  R V+LPQ++   +P
Sbjct: 102 FPAALIGFTLNVGAYSSEIMRGAILSVPRGQWEAASAIGMSSSQTLRRVILPQSVFVSLP 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++LLK++SLA  +   ++      I+    + + I      IYL+ S ++    
Sbjct: 162 PLSNSFISLLKDTSLAAVITVPEMFLAAQRIVAVNYEPLIIYSETALIYLAFSTLLGKLQ 221

Query: 386 NRLN 389
            RL 
Sbjct: 222 LRLE 225


>gi|323526704|ref|YP_004228857.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383706|gb|ADX55797.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 225

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+ L+ F   L R F  K   A+   Y+  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLALA-FIVALVRLFGPKWAVAVVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ +E++R  + ++P+GQ EAA ++G+T  +A R
Sbjct: 84  --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ ++ L+K++SLA  +   ++      I + T + + +      
Sbjct: 136 RAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195

Query: 373 IYLSLSIMIALFMNRLNAK 391
           +YL  S +++    RL  K
Sbjct: 196 VYLLFSSVLSSAQVRLERK 214


>gi|311898351|dbj|BAJ30759.1| putative amino acid ABC transporter substrate-binding protein
           [Kitasatospora setae KM-6054]
          Length = 315

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 78/134 (58%), Gaps = 9/134 (6%)

Query: 258 GGSTVSPEFMSL-------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RK 309
           G S VS E M L        + L+ + AA+ AEI+R G+++V  GQ+EAA ALG+   R+
Sbjct: 146 GPSFVSFETMDLLGALGAAVLGLALHQAAYAAEIIRGGVLSVDAGQLEAAAALGIPKFRQ 205

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R+V +PQAMR I+P   ++ ++L K +S+   +   +L      I  +TG+ + ++++
Sbjct: 206 AWRIV-VPQAMRGILPNAANEVVSLFKGTSIVYVMAIGELFYQVQVIYGRTGRVVPLLMV 264

Query: 370 WMFIYLSLSIMIAL 383
               Y+ L+  ++L
Sbjct: 265 ATVWYVLLTTALSL 278


>gi|303253105|ref|ZP_07339254.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248741|ref|ZP_07530754.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|302647787|gb|EFL77994.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854668|gb|EFM86858.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    A+++AE +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + + 
Sbjct: 91  IALVFLGASYMAEALRAGLLAVPKGQAEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L L+K +S+  AV  A+L+ V   II    +  E + +    YL + + I+L       
Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|289624565|ref|ZP_06457519.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|330866227|gb|EGH00936.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. aesculi str. 0893_23]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|307727762|ref|YP_003910975.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588287|gb|ADN61684.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 218

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++  + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQ
Sbjct: 80  GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++  + P     + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++ 
Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +  +   L  +  + + +
Sbjct: 199 FPLTWYARVLEKRNKVGQHR 218


>gi|241203420|ref|YP_002974516.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857310|gb|ACS54977.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 230

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 23/210 (10%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIF-GLPTLVLIALKY-- 242
           IFVFS ++G   SLFA    R         +PLL    ++  ++F G+P +++I L Y  
Sbjct: 28  IFVFSTIVG---SLFAMVEYRR--------VPLLRELVVAYKVVFKGVPMVIVIFLAYYG 76

Query: 243 ---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               L F   ++G  ++ G ST  P +++L +AL+   AAF AE+V+  L +   GQ +A
Sbjct: 77  LPPTLQFLTSLVG-IDYNGHST--PNWITLIVALTACVAAFQAEVVKGALNSFDNGQADA 133

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LG    +  R V+LPQ + + IP L +  + ++K  SL  A+   D+ +        
Sbjct: 134 AYSLGYKRSQVFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQSQLTAAL 193

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
               +E  LI + IY+ ++ ++    +R+ 
Sbjct: 194 NFYYLEAFLIAVVIYMVIAYIVTYAADRME 223


>gi|86360504|ref|YP_472392.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284606|gb|ABC93665.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 230

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 17/213 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+     IFV S ++G   SLFA  +  +      + L + Y   F   G+P +V+I L
Sbjct: 20  LTLAMALAIFVLSTIIG---SLFA--MVEYRRVPVLRQLVVAYKVAFK--GVPMVVVIFL 72

Query: 241 KY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            Y      L F   ++G ++N  G ST  P +++L +AL+   AAF AE+V+  L +   
Sbjct: 73  AYYGLPSALQFLTSLVGVEYN--GHST--PNWVTLIVALTACVAAFQAEVVKGALNSFDT 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ +AA +LG   R+  R V+LPQ + + IP L + ++ ++K  SL  A+   D+ +   
Sbjct: 129 GQADAAYSLGYKKRQLFRRVMLPQVIVAAIPDLANSFMVIMKALSLGFAIEVVDIFAQSQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
                    +E  L+ + IY+ ++  +    +R
Sbjct: 189 LTAALNFYYLEAFLVAVVIYMVIAYAVTQIADR 221


>gi|219669812|ref|YP_002460247.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219540072|gb|ACL21811.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 262

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 26/216 (12%)

Query: 180 TLTMDT---NAKIFVFSFVLGIVLSLFATRLS---RHFHEKTGKA--LPLLYISTF---L 228
           TL +DT       F+  F++ I+++ F+  LS     F    GK+  LPL Y S     +
Sbjct: 46  TLRLDTVYLYRTKFIDGFLMTIIIAFFSLILSLIIGSFLAFAGKSRFLPLHYFSKAYVEI 105

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVR 286
           I G P LV I +             F +I  +   +S  ++   I LS ++ A+I EI+R
Sbjct: 106 IRGTPLLVQIYV-------------FFYIIATAMHLSNRYVLGVIILSVFSGAYICEIIR 152

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++   Q+E A +LG T  +  R +++PQ  + I+PPL  Q ++L+K+SSL   +  
Sbjct: 153 AGIESIEASQIETARSLGFTSYQRYRYIIIPQVFKRILPPLAGQLVSLIKDSSLLSVIAV 212

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++L      + + T    E  ++   +Y+ L++ I+
Sbjct: 213 SELTKNVQEVDSFTFATFENYIVLALLYMILTVPIS 248


>gi|325661856|ref|ZP_08150477.1| hypothetical protein HMPREF0490_01215 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471834|gb|EGC75051.1| hypothetical protein HMPREF0490_01215 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 215

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 84/148 (56%), Gaps = 8/148 (5%)

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F    L Q N IGG  ++    ++ +  S   AA+ AEI RSG+ ++P+GQ EAA  LG
Sbjct: 70  YFAPYYLWQMN-IGGYKLT----AILLGCSLNYAAYFAEIYRSGIESIPKGQYEAAALLG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            + ++    ++LPQ +++++P +T++ + L+K++SL  ++ + ++ +V   I       +
Sbjct: 125 YSKQQTFLRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQIAAAQTTVV 184

Query: 365 EIILIWMFIYL---SLSIMIALFMNRLN 389
              +  +F Y+   +++  + LF  +LN
Sbjct: 185 PFFIAGVFYYIFNYAVAWGMELFEKKLN 212


>gi|307246615|ref|ZP_07528686.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307255600|ref|ZP_07537405.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307260051|ref|ZP_07541763.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306852487|gb|EFM84721.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306861449|gb|EFM93438.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306865887|gb|EFM97763.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    A+++AE +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + + 
Sbjct: 91  IALVFLGASYMAEALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L L+K +S+  AV  A+L+ V   II    +  E + +    YL + + I+L       
Sbjct: 151 VLFLIKETSVISAVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFEN 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|271500847|ref|YP_003333872.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344402|gb|ACZ77167.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 238

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 77/137 (56%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   AA+ ++ +R  L AVP+GQ E+  ALG++     R +++PQ  R
Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPQGQWESGQALGMSKGVIFRRLIMPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     +I   IYL++++  
Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLAITLFS 219

Query: 382 ALFMNRLNAKIALKEKK 398
            + + ++  +    E++
Sbjct: 220 QVILKKIETRATRFERR 236


>gi|170696519|ref|ZP_02887643.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170138566|gb|EDT06770.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 218

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++  + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQ
Sbjct: 80  GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFAQQLRYIVWPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++  + P     + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++ 
Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +  +   L  +  + + +
Sbjct: 199 FPLTWYARVLEKRNKVGQHR 218


>gi|229592161|ref|YP_002874280.1| putative histidine transporter permease [Pseudomonas fluorescens
           SBW25]
 gi|229364027|emb|CAY51589.1| putative histidine transport system permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESVLWPLLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|284048144|ref|YP_003398483.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
 gi|283952365|gb|ADB47168.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
          Length = 263

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 7/121 (5%)

Query: 249 PVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P  G    +G S+V  + +    IAL+ + +A IAEI+R GL A+ +GQ EA  A G   
Sbjct: 88  PAPGVRRMLGLSSVETKLLFKCTIALTIFESAIIAEIIRGGLNAISKGQFEAGYAQGFNM 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS------VGGTIINQTG 361
            +    ++LPQA R IIP L SQ + ++K++S    V   +L++       G  + N TG
Sbjct: 148 VQVMWYIILPQAFRKIIPTLMSQVITIIKDTSFLANVATIELMARVNKVLSGAALYNGTG 207

Query: 362 Q 362
           +
Sbjct: 208 K 208


>gi|170722936|ref|YP_001750624.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169760939|gb|ACA74255.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S   P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFAVNTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|115376859|ref|ZP_01464082.1| amino acid ABC transporter binding protein and permease protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|115366162|gb|EAU65174.1| amino acid ABC transporter binding protein and permease protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 441

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 51/72 (70%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L    AA+ AE+ R+G++AVPRGQMEAA+ALG+T   A R V++PQA R  +P
Sbjct: 312 FSAAILGLGLNYAAYEAEVYRAGVLAVPRGQMEAALALGMTTPLALRRVVVPQAFRVALP 371

Query: 326 PLTSQYLNLLKN 337
            +T+ ++ LLK+
Sbjct: 372 GVTNDFIALLKD 383


>gi|320353113|ref|YP_004194452.1| PAAT family amino acid ABC transporter membrane protein 1
           [Desulfobulbus propionicus DSM 2032]
 gi|320121615|gb|ADW17161.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 226

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 73/127 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S+ + L   T A+ A I R  ++++PRGQ  AA ALG++  +  R ++LPQ +R  IP
Sbjct: 89  FFSVAVVLGMTTGAYQANIFRGAILSLPRGQFRAASALGMSDVQTIRSIILPQVLRLSIP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             +++Y  +LK+S+LA  +G  ++++    + ++T Q + + L    +Y  L+ +    +
Sbjct: 149 AWSNEYSIILKDSALAFVIGAPEIMARAQFVASRTYQHLPLYLTAGLLYFLLTWLGVWGL 208

Query: 386 NRLNAKI 392
            +L  ++
Sbjct: 209 RKLEQRL 215


>gi|310820157|ref|YP_003952515.1| amino acid ABC transporter permease [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393229|gb|ADO70688.1| Amino acid ABC transporter, permease protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 482

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/72 (47%), Positives = 51/72 (70%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L    AA+ AE+ R+G++AVPRGQMEAA+ALG+T   A R V++PQA R  +P
Sbjct: 353 FSAAILGLGLNYAAYEAEVYRAGVLAVPRGQMEAALALGMTTPLALRRVVVPQAFRVALP 412

Query: 326 PLTSQYLNLLKN 337
            +T+ ++ LLK+
Sbjct: 413 GVTNDFIALLKD 424


>gi|309389820|gb|ADO77700.1| amino acid ABC transporter membrane protein, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 212

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%), Gaps = 1/114 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI R G+ ++ +GQ EAA  LG+ +R+    +++PQ ++ ++P  +++ +NL+K+
Sbjct: 96  GAYFTEIFRGGIESIGQGQYEAAKVLGMNYRQTMSRIIIPQTIKRVLPATSNEAINLVKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           S+L   +G  DL+      + +    I  I+  +F YL +S +I     +L AK
Sbjct: 156 SALVAVIGLGDLLRAAKVSVTRDFSIIPFIIAAVF-YLLISSVIVTVFRKLEAK 208


>gi|91778420|ref|YP_553628.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|296159867|ref|ZP_06842688.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|91691080|gb|ABE34278.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295889850|gb|EFG69647.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 218

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 74/140 (52%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++  + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQ
Sbjct: 80  GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++  + P     + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++ 
Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +  +   L  +  + + +
Sbjct: 199 FPLTWYARVLEKRQKVGQHR 218


>gi|302537324|ref|ZP_07289666.1| glutamate transporter permease [Streptomyces sp. C]
 gi|302446219|gb|EFL18035.1| glutamate transporter permease [Streptomyces sp. C]
          Length = 248

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 53/86 (61%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N  GG+     F    +AL+ YT  F+ E +RSG+  VP GQ EAA ALGL+  +   L+
Sbjct: 106 NLGGGTFKEIGFRLAVLALTAYTGTFVCEALRSGINTVPVGQAEAARALGLSFFQVLTLI 165

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +LPQA R++I PL +  + L KN+++
Sbjct: 166 VLPQAFRAVIAPLANVLIALTKNTTV 191


>gi|283852209|ref|ZP_06369482.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283572435|gb|EFC20422.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 237

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 78/133 (58%), Gaps = 4/133 (3%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +S  F S  + L   +AA+ ++I R  +  +P GQ+ AA ALG++   A R ++LPQA+R
Sbjct: 96  LSSGFFSAVVVLGLTSAAYQSQIFRGAIRGLPPGQLRAARALGMSDATAIRAIILPQALR 155

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMFIYLSLSI 379
             IP  +++Y  LLK+S+LA  +G  ++++   ++   T Q   + I+   +F +L+ + 
Sbjct: 156 LSIPAWSNEYSILLKDSALAFTIGVLEVMARTRSVAATTHQPLPLSILAGALFFFLTWAG 215

Query: 380 MIALFMNRLNAKI 392
           + AL   RL AK+
Sbjct: 216 IKAL--KRLEAKV 226


>gi|261493138|ref|ZP_05989673.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261495783|ref|ZP_05992219.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261308548|gb|EEY09815.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311193|gb|EEY12361.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 227

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS  +I G P LV I + +   +  P +G F       + P   ++ I  S    A+ +
Sbjct: 65  YIS--IIRGTPMLVQICIVF---YGLPAIGIF-------IDPIPAAI-IGFSLNIGAYGS 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ + +VP+GQ EA   +G+T+ +  R ++ PQA R  +PPL++ ++ L K++SLA 
Sbjct: 112 ETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLAS 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            V   ++  V   + N +   + + +    IY     ++ L   RL  +
Sbjct: 172 VVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFLIQARLEVR 220


>gi|116254188|ref|YP_770026.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258836|emb|CAK09942.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 222

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 34/204 (16%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRH----------FHEKTGKALPLLYISTFLIFGLPT 234
           T   + V + VLGIVLS+      R            + +  +  P L    F+ FGLP+
Sbjct: 23  TTLALTVSTSVLGIVLSILGAAARRGPYPWLRKLVGLYVEIMRNTPFLVQLFFIFFGLPS 82

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L                       G  + P   +  +A++   AA+  E+V +GL A+PR
Sbjct: 83  L-----------------------GIRLDP-ITAAVLAMTLNMAAYTIEVVGAGLDAIPR 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALGL  R     ++LPQA+  I P LTSQ + ++  S++   +   +L     
Sbjct: 119 GQKEAAQALGLRPRLVFFKIILPQAIAIIFPALTSQIIIMMLESAVVSQISVRELAQEAD 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLS 378
            + ++T ++ E  L+   IYLS+S
Sbjct: 179 LLQSRTFRSFETYLVATLIYLSMS 202


>gi|150017369|ref|YP_001309623.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149903834|gb|ABR34667.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 225

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 6/136 (4%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +S E +S+ I  S + AA + +IVR  L ++P+ Q+E+  ALGL + +  R VL+PQA+
Sbjct: 88  NLSGEVVSV-IVFSLWGAAEMGDIVRGSLQSLPKHQIESGKALGLNYYQIYRYVLMPQAI 146

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYL 375
           R +IP   +    ++K +SL V +G  D+V +G  II  +         W+     F+Y 
Sbjct: 147 RRMIPGTINLATRMIKTTSLVVLIGVIDVVKMGQQIIESSRFQFPTASFWIYGFIFFLYF 206

Query: 376 SLSIMIALFMNRLNAK 391
            +   ++    RL +K
Sbjct: 207 IICYPLSKISKRLESK 222


>gi|291521932|emb|CBK80225.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Coprococcus catus GD/7]
          Length = 236

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 76/122 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+RSG+ +V  GQMEA  A+GL+   +   +++PQA+++I+P L +++++L+K
Sbjct: 114 SGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMIKIVIPQAVKNILPTLGNEFISLIK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG ADL      I + + + +   L+   IY+ L ++I+L +  +   +   +
Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIVLVLIISLLIKLMERSLKKSD 233

Query: 397 KK 398
           ++
Sbjct: 234 RR 235


>gi|260222062|emb|CBA31251.1| Octopine transport system permease protein occM [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 231

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 4/114 (3%)

Query: 251 LGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           L QF ++  S     +   F   +IAL+   AA++AE +R+G++A+P GQ EAA A G+ 
Sbjct: 82  LSQFEWVRASVAWVVLEDAFYCGFIALTLNIAAYMAEDIRAGILAIPVGQTEAARAFGMP 141

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
                R ++LPQA+R   P L ++ ++LLK ++L   +   DL  V   + N++
Sbjct: 142 SGTLLRRIVLPQALRIATPALGNEVVSLLKATALVSTITVFDLTGVARRLSNES 195


>gi|237669674|ref|ZP_04529651.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237654748|gb|EEP52311.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 221

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 75/120 (62%), Gaps = 3/120 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+    A+++EI R+G+ AV  GQMEA+ +LGL + K  + V+LPQA++ +IP + +Q
Sbjct: 93  IALALNAGAYMSEIFRAGIQAVDVGQMEASRSLGLGYLKTMQKVILPQAIKVMIPSIINQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---IILIWMFIYLSLSIMIALFMNR 387
           ++  +K++S+   +   +L S G  I+ +  + +E   I+ I  FI ++   +++ ++ R
Sbjct: 153 FIVTIKDTSILTVITIRELTSSGQIIVARNFKPLETYAIVGIMYFILITTLSILSKYIER 212


>gi|206560034|ref|YP_002230798.1| putative amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
 gi|198036075|emb|CAR51969.1| putative amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 252

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 10/128 (7%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L+LI   +  +F  PVL   +  G +TV         AL+    A++A  V +G++A
Sbjct: 83  IPVLMLI---FWTYFLMPVLLHMDVPGLATV-------VCALALIGGAYLAHAVHAGIVA 132

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
              GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  
Sbjct: 133 AGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSF 192

Query: 352 VGGTIINQ 359
           V   + N+
Sbjct: 193 VATQVNNR 200


>gi|325570568|ref|ZP_08146294.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156414|gb|EGC68594.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 493

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 52/67 (77%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+  +AA++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 368 IALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNE 427

Query: 331 YLNLLKN 337
           ++ ++K 
Sbjct: 428 FVTVIKE 434



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T +LA  G++  +I G+L+   +LS +K +  I  VY+E  R  P LV IF +Y
Sbjct: 297 TIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQIFIVY 350


>gi|313115214|ref|ZP_07800698.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622492|gb|EFQ05963.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 227

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 7/133 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA +    A+ AE +R  L +VP+GQ+EA   +G++  +  R ++LPQA+R+ +P
Sbjct: 95  FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGYCVGMSWWQIMRRIVLPQALRTAVP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++  + ++K++SLA  +  A+L   G  +  +T        I++ IY  ++++  LF 
Sbjct: 155 ALSNSLIGMIKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207

Query: 386 NRLNAKIALKEKK 398
             +    AL E++
Sbjct: 208 TVITKLQALLERR 220


>gi|182438505|ref|YP_001826224.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178467021|dbj|BAG21541.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 243

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 64/112 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+VR  + +VPRGQ EAAIAL L+  +    V+LPQA   +IP  T+  + LLK 
Sbjct: 101 GAYGAEVVRGAINSVPRGQYEAAIALNLSPSRRLWKVILPQAWVQMIPSFTNLLIQLLKA 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + L   +  ADL++V   + ++TG+ +   L  +  Y  L+  + + MN L 
Sbjct: 161 TPLLWLISAADLMTVIQQLRDRTGETLTAYLTLLAAYFVLAYALTMLMNLLE 212


>gi|167840668|ref|ZP_02467352.1| ABC transporter, inner-membrane component [Burkholderia
           thailandensis MSMB43]
          Length = 217

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 12/183 (6%)

Query: 216 GKALPLLY-ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           G+A  L Y +  +LI G P L  + + Y   F  P++G       +TV        ++L+
Sbjct: 44  GRAFALPYGVFIWLIRGTPYLSQLVIIY---FGLPMIGVTMSAVEATV--------VSLA 92

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            Y +A+ AEI R+   +VPRGQ+EAA A G++ R   R + LPQA+   +P + +Q + +
Sbjct: 93  LYASAYFAEIFRAAWASVPRGQLEAAAAFGVSRRATFRAIELPQALAFALPLIANQTILV 152

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +K S++A  +   +L      ++  T   I    + +  Y  L+  ++L   R  A+I  
Sbjct: 153 IKESAVASIITVPELTMTASDVVASTYTYIGPYALLIACYWLLTQAVSLLAQRATARIPF 212

Query: 395 KEK 397
             K
Sbjct: 213 LRK 215


>gi|158321703|ref|YP_001514210.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158141902|gb|ABW20214.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 225

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 31/185 (16%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFD 247
           VLGIV  L  T  S+       + +  LY+ TF I  +P LV + + Y        +H D
Sbjct: 38  VLGIVFGLIMTSKSKWI-----RFISRLYLETFRI--IPILVWLYIVYFGITSALNIHLD 90

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             ++                   I  S +  A + +IVR  L ++P+ QME+  ALGL+ 
Sbjct: 91  GEIVA-----------------IIVFSFWGIAEMGDIVRGSLESLPKHQMESGKALGLSF 133

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R VL+PQA+R ++P   +    ++K +SL   +G  ++V VG  II+ +   I+  
Sbjct: 134 IQLYRYVLIPQAVRRMVPGAINLATRMVKTTSLVTLIGAVEVVKVGQQIIDASRFQIDTA 193

Query: 368 LIWMF 372
             W++
Sbjct: 194 SFWIY 198



 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +AF  ++  +++G + G    S +K + +I R+Y+E FR IP LV ++ +Y  + S L I
Sbjct: 28  IAFISILIGSVLGIVFGLIMTSKSKWIRFISRLYLETFRIIPILVWLYIVYFGITSALNI 87

Query: 159 P-DHSIV 164
             D  IV
Sbjct: 88  HLDGEIV 94


>gi|330820725|ref|YP_004349587.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327372720|gb|AEA64075.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 239

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 22/187 (11%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F  GI L++ A R +R         +PLL +  F    +P L+LI   +  +F  P+L 
Sbjct: 45  GFAAGIALAM-AGRAAR---------VPLLVVIGFF-RAIPVLMLI---FWTYFLLPILF 90

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             +        P   ++  ALS    A++A  V +G++AV   Q +A ++LGLT  +  R
Sbjct: 91  HVDV-------PGLAAVVCALSLIGGAYLAHSVHAGIVAVGDAQWQAGLSLGLTRWQTLR 143

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371
            V+LPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+     I + L   
Sbjct: 144 EVVLPQAVRIMAPSFVNQWVSLVKDTSLAYIVGVNELSFVATQVNNRLMVYPIPVFLFVA 203

Query: 372 FIYLSLS 378
           F+YL L 
Sbjct: 204 FLYLVLC 210


>gi|310640333|ref|YP_003945091.1| inner membrane amino-acid abc transporter permease protein yecs
           [Paenibacillus polymyxa SC2]
 gi|309245283|gb|ADO54850.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Paenibacillus polymyxa SC2]
          Length = 215

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 104/205 (50%), Gaps = 14/205 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + S + G+++ L    ++R    +  + L  +Y+S  +I G P LV IA+ Y      
Sbjct: 22  ITIVSMLFGLIIGLIVA-VARLKGNRPVRWLARMYVS--IIRGTPVLVQIAVIYY----- 73

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L  +    GS  +       +ALS  T A+++E  R  ++AVP+GQ EAA A G++  
Sbjct: 74  -GLDDYGISFGSLTAA-----CLALSINTGAYLSETFRGAILAVPQGQTEAAYATGMSPG 127

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA+R  I P+ + ++ +LK +SL   +G ++L+     +  Q    +  +L
Sbjct: 128 QTMWRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSELMRQAQLLQAQYLLYMPFLL 187

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIA 393
               +Y  +SI  +  + R+  ++A
Sbjct: 188 EIALMYWIMSIGFSAILERVEKRLA 212



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 19/94 (20%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T ++    M+   IIG +V   RL  N+ V W+ R+YV + R  P LV I  +
Sbjct: 12  LLKGAYYTLYITIVSMLFGLIIGLIVAVARLKGNRPVRWLARMYVSIIRGTPVLVQIAVI 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           Y                 +G  L++ G+SF +LT
Sbjct: 72  Y-----------------YG--LDDYGISFGSLT 86


>gi|121610492|ref|YP_998299.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121555132|gb|ABM59281.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 1/138 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP   +L +AL    +A+ AE  R+G+ ++ +GQ+EAA+A+G++  +A R V++PQ
Sbjct: 83  GLQMSPLATAL-VALVLNISAYNAETFRAGINSIRKGQLEAALAMGMSRHQALRKVVIPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R I+P + S ++ L K++SL   +   +L      I  QT + +E++     IY  + 
Sbjct: 142 ATRRILPVIASTWVALFKDTSLVSVIAVGELAYSAMQIRAQTFRVLELLTAMAAIYWLMG 201

Query: 379 IMIALFMNRLNAKIALKE 396
              A  ++ ++    +KE
Sbjct: 202 YPQAKLVDWIHRHYGVKE 219


>gi|257876942|ref|ZP_05656595.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257811108|gb|EEV39928.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 493

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 52/67 (77%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+  +AA++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 368 IALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNE 427

Query: 331 YLNLLKN 337
           ++ ++K 
Sbjct: 428 FVTVIKE 434



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T +LA  G++  +I G+L+   +LS +K +  I  VY+E  R  P LV IF +Y
Sbjct: 297 TIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQIFIVY 350


>gi|172060591|ref|YP_001808243.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171993108|gb|ACB64027.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 241

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 10/128 (7%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L+LI   +  +F  PVL   +  G +TV         AL+    A++A  V +G++A
Sbjct: 72  IPVLMLI---FWTYFLMPVLLHMDVPGLATV-------VCALALVGGAYLAHAVHAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
              GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  
Sbjct: 122 AGDGQWQAGLSLGLTRWQTVRHVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSF 181

Query: 352 VGGTIINQ 359
           V   + N+
Sbjct: 182 VATQVNNR 189


>gi|90962038|ref|YP_535954.1| polar amino acid ABC transporter permease [Lactobacillus salivarius
           UCC118]
 gi|227891057|ref|ZP_04008862.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|301300403|ref|ZP_07206605.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90821232|gb|ABD99871.1| Polar amino acid ABC transporter, permease protein [Lactobacillus
           salivarius UCC118]
 gi|227867146|gb|EEJ74567.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|300214736|gb|ADJ79152.1| Polar amino acid ABC transporter, permease protein [Lactobacillus
           salivarius CECT 5713]
 gi|300852005|gb|EFK79687.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 213

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 25/180 (13%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F+    +  PLL    F+ +GLP   L+ L          LG+F+            +L
Sbjct: 52  RFYVWLMRGTPLLLQLIFVFYGLP---LVGLT---------LGRFD-----------AAL 88

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +  +  YTA F AEI R GL ++ +GQ E+A  L LT+ +  R ++ PQ ++ ++P + +
Sbjct: 89  FAFILNYTAYF-AEIFRGGLQSIDKGQYESAKVLRLTYWQTIRKIVTPQVVKIVLPSIGN 147

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +NL+K+SSL   +G  DL+  G    ++    + ++++ + +YL ++ ++   + +L 
Sbjct: 148 EVINLVKDSSLVYVIGIGDLLRAGNVATSRDVTLVPLVMVGV-VYLVMTAVLTFILRKLE 206


>gi|33597552|ref|NP_885195.1| glutamine ABC transporter permease protein [Bordetella
           parapertussis 12822]
 gi|33573980|emb|CAE38299.1| glutamine transport system permease protein [Bordetella
           parapertussis]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 67/116 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR  L++V +G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK
Sbjct: 101 SGAYIAEIVRGSLLSVHKGLKEAGQAMGLPFYKILLYIIGPVAFRRMIPPLGNQCIISLK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SSL + +G A+L   G  I+    +A+EI      +YL L+  +AL +  L  ++
Sbjct: 161 DSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGTMALGLRMLEKRM 216


>gi|326803632|ref|YP_004321450.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651009|gb|AEA01192.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 497

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA     AA+ AEI R G+ +VP+GQ E+   LG+  ++  R ++LPQ M+  +P
Sbjct: 370 FTAALIAFVVNYAAYFAEIFRGGITSVPQGQYESIKVLGIGWQRGFRRIILPQVMKITLP 429

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + ++ + L+K++SL   +G  +L+  G    N     I  ++  +F YL  +  + L +
Sbjct: 430 SVGNEVIALVKDTSLVYVIGLGELLRAGSIAANTYATIIPYLVCGVF-YLIFTAFVTLAL 488

Query: 386 NRLNAKIA 393
            R+  +++
Sbjct: 489 RRIEYRVS 496


>gi|257868053|ref|ZP_05647706.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257874383|ref|ZP_05654036.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257802136|gb|EEV31039.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257808547|gb|EEV37369.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 493

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 52/67 (77%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+  +AA++AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++
Sbjct: 368 IALALNSAAYVAEIIRAGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNE 427

Query: 331 YLNLLKN 337
           ++ ++K 
Sbjct: 428 FVTVIKE 434



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 32/54 (59%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T +LA  G++  +I G+L+   +LS +K +  I  VY+E  R  P LV IF +Y
Sbjct: 297 TIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQIFIVY 350


>gi|121610493|ref|YP_998300.1| Fis family transcriptional regulator [Verminephrobacter eiseniae
           EF01-2]
 gi|121555133|gb|ABM59282.1| transcriptional regulator, Fis family [Verminephrobacter eiseniae
           EF01-2]
          Length = 221

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 106/203 (52%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S + G+V++L      R +  +  + L + YI +  +  +P LV++   Y   F  P+
Sbjct: 31  VSSILAGLVITLL-----RLYGPRWLRPLLVFYIDS--MRAIPVLVVLVWIY---FAFPI 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   NF      +P F +  +AL+ + AA+ AE++R+G+ ++  GQ  AA+ALG++  + 
Sbjct: 81  LVGLNF------AP-FWAALVALTLHIAAYAAEVIRAGIESIRPGQTRAALALGMSRAQI 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R VLLPQA   ++P   S     +K++++A  +   +L+    T+  Q+ + +E+    
Sbjct: 134 LRKVLLPQATIRMLPAFGSILTMAIKDTAIASVIAVPELMHKAETVAGQSYRPVEVSSAV 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
           M  Y  +   +   ++RL  ++A
Sbjct: 194 MLAYFLILFPVTRGVDRLYQRLA 216


>gi|104782882|ref|YP_609380.1| arginine/ornithine transport membrane protein AotM [Pseudomonas
           entomophila L48]
 gi|95111869|emb|CAK16593.1| arginine/ornithine transport membrane protein AotM [Pseudomonas
           entomophila L48]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAIGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|110347319|ref|YP_666136.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110287495|gb|ABG65553.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chelativorans sp. BNC1]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 76/128 (59%), Gaps = 10/128 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   + ++F  PV        G+ +SP F SL +A+  +  A+++E++R+ + 
Sbjct: 70  GIPLLMLI---FWVYFFLPV------ALGTPISP-FWSLILAIVVFQTAYLSEVLRAAIE 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EAA++LGL++      V LPQA+ + IP + +Q+ +++K +SL   +   +L 
Sbjct: 120 ALPKGQTEAALSLGLSYFPRIWKVTLPQALYNSIPGILNQFTSMIKETSLGYVLAVEELT 179

Query: 351 SVGGTIIN 358
                + N
Sbjct: 180 YAANKVNN 187


>gi|330811272|ref|YP_004355734.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379380|gb|AEA70730.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAIVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLRATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|307706790|ref|ZP_07643595.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307617875|gb|EFN97037.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
          Length = 213

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 20/174 (11%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259
           +G ++ L   +  LIF +P  VLIA   Q+H+                 P+L Q  FI  
Sbjct: 13  SGASMTLQVFALVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFIYY 72

Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
              S         +  IA     AA+ AEI R G+  +P+GQ EAA  L        R +
Sbjct: 73  VLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFNPFATVRYI 132

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    + + L
Sbjct: 133 ILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 186


>gi|290473963|ref|YP_003466837.1| arginine ABC transporter membrane protein [Xenorhabdus bovienii
           SS-2004]
 gi|289173270|emb|CBJ80045.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus
           bovienii SS-2004]
          Length = 240

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 8/179 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNF---IGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L LI L     FD   ++ QF     I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQL-LITLSE--GFDVNLIVWQFRIQMEIDNFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   +A+ ++ +R  L AVP GQ EA  ALGL+  +    + +PQ  R  +P L +Q+L
Sbjct: 111 LSLLYSAYASQTLRGALKAVPMGQREAGQALGLSQSRIFFRLTMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            LLK+++L   +   DL+    +I  +T +     +I   IYL ++++    + RL  +
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAAMIYLVITLVSQFILKRLEMR 229


>gi|261337914|ref|ZP_05965798.1| permease protein of ABC transporter [Bifidobacterium gallicum DSM
           20093]
 gi|270277398|gb|EFA23252.1| permease protein of ABC transporter [Bifidobacterium gallicum DSM
           20093]
          Length = 420

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F FIG    SP + ++ I+L  Y  + IAE+VRSG+  +P GQ EA++ALGLT  ++   
Sbjct: 135 FAFIGWD--SPSYWAVVISLVLYNGSVIAELVRSGVGNLPNGQREASLALGLTRTQSLMQ 192

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +PQA+ +++P   +Q + +LK+++L   + + DL+ 
Sbjct: 193 VEVPQAIFAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 230


>gi|209551037|ref|YP_002282954.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536793|gb|ACI56728.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  EI+R G+ +V +GQ+EA  ALGL      RL++L  A+R+I P LTSQ
Sbjct: 95  IALGINGGAYAIEIIRGGVESVSKGQIEAGFALGLHKGDVFRLIVLKPALRAIYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           ++ L   +S+  ++   +L S    I + T ++ E+      IYL +S +M+ LF
Sbjct: 155 FVMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFSVTTIYLVISTLMMGLF 209


>gi|152983662|ref|YP_001349725.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Pseudomonas
           aeruginosa PA7]
 gi|150958820|gb|ABR80845.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Pseudomonas aeruginosa PA7]
          Length = 218

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 108/207 (52%), Gaps = 22/207 (10%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F  + V G++ ++   R SRHF      + P+ ++  F I   P L+      Q++F   
Sbjct: 31  FTLAMVFGLLFAM--ARRSRHFW----LSWPVAWLIEF-IRSTPLLI------QVYFLFY 77

Query: 250 VLGQFNFIGGSTVSPEFMSLYIAL--SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           VL  +     S V+    +L IAL  +CYTA    E+ R+GL +VPRGQ EA  AL  + 
Sbjct: 78  VLPSYGLSMTSLVAG---TLGIALHYACYTA----EVYRAGLDSVPRGQWEAVTALNFSP 130

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +A R V+LPQA+R ++P L +  + + K++ +  A+   +++     + + + + +E I
Sbjct: 131 WRAYRQVILPQAIRPVLPALGNYLIAMFKDTPVLSAITVVEIMQQAKNVGSDSFRYLEPI 190

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +    +L +SI +A  + ++  + AL
Sbjct: 191 TLVGVFFLLISIGLASVVRQVEKRTAL 217


>gi|115360320|ref|YP_777457.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115285648|gb|ABI91123.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 218

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 22/179 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFD 247
           FV S VLG++L+L     +R               +TF+  I GLP +V +   + ++F 
Sbjct: 28  FVLSTVLGLLLALMRVSDNRVLSNTA---------ATFINVIRGLPIIVQL---FYIYFV 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P LG    +  S     F+ L IA S Y A    E  R+G+ A+  GQ+EAA ++G+  
Sbjct: 76  LPDLG----VQLSAFQAGFIGLGIAYSVYQA----ENFRAGIQAIDHGQIEAAQSIGMRG 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
               R V+LPQA R  +PP  +  + +LK+SSLA  +  A++   G  I + T Q + +
Sbjct: 128 TMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQNMTV 186


>gi|322373223|ref|ZP_08047759.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
 gi|321278265|gb|EFX55334.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
          Length = 230

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 83/151 (54%), Gaps = 17/151 (11%)

Query: 264 PEFMSLYIALSCYT---------------AAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PEF++ ++ L                   +A I+E+ ++   A+P+GQ+EA +++GLT  
Sbjct: 80  PEFLNWWLGLDINNWSKLIFVLVTMVLLFSALISEVFKAAYQAIPKGQLEAGLSIGLTPE 139

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEI 366
           +A   ++ PQA +  +P +T+  LNL+++++LA  +GF D++  G  +I++     ++E 
Sbjct: 140 QAFVRIVAPQAFKVALPNITTAILNLMRDAALAYTIGFIDVMGKGNLLISRHLGNYSLET 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 +Y  ++++++L       ++++K +
Sbjct: 200 YTAVALVYWGIALILSLISRMTEQQLSIKAR 230


>gi|113460399|ref|YP_718461.1| arginine transporter permease subunit ArtQ [Haemophilus somnus
           129PT]
 gi|170717489|ref|YP_001783479.1| arginine ABC transporter permease [Haemophilus somnus 2336]
 gi|112822442|gb|ABI24531.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Haemophilus somnus 129PT]
 gi|168825618|gb|ACA30989.1| polar amino acid ABC transporter, inner membrane subunit
           [Haemophilus somnus 2336]
          Length = 223

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 7/207 (3%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S +LG+ LS+F   L  H      K  P   I T L+ GLP ++++ L Y   F  P 
Sbjct: 21  VCSLLLGLALSIFFVVLETHKWACIRK--PTATIVT-LLRGLPEILVVFLIY---FGVPE 74

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + ++  IG       F    +ALS   A++ ++ +R  + A+P GQ E+  ALGL+    
Sbjct: 75  ILEW-VIGEYVEFGAFGCGVVALSIIFASYASQSLRGAIQAIPLGQWESGAALGLSRSYT 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q        
Sbjct: 134 FIFLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDLMRQAELINTNTHQPFTWYGFA 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             +YL +++     + +L  ++   E+
Sbjct: 194 ALLYLLITLFSQFIIRKLERRVTRFER 220


>gi|190404350|ref|YP_001960981.1| rcorf6 [Agrobacterium rhizogenes]
 gi|158322146|gb|ABW33563.1| rcorf6 [Agrobacterium rhizogenes]
          Length = 240

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 17/208 (8%)

Query: 191 VFSFVLGIVLSLFAT---RLSRHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
           V   VLG+VLSLF     R+ R F+       +  PLL     + FGLP L  + L  Q 
Sbjct: 35  VIGVVLGLVLSLFGLSRWRVLRWFNSAYIFVFRGTPLLVQVILIYFGLPYLTNVDLFPQD 94

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H        F FI   ++S   ++   A + + AA+ +EI R  + +V  GQ +A  A+
Sbjct: 95  VHL-------FGFI---SISGAIVAGVTAFALHEAAYFSEISRGAIASVDHGQWDAGRAV 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T     + ++LPQA+R ++PPL +Q   + K +SL   +   +++ +   + + T + 
Sbjct: 145 GMTPGLLMQRIILPQAIRIMLPPLGNQMNGMFKATSLLYLIAVPEMLFITDAVNSVTYKT 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E+ L     YL+L+   +     L  +
Sbjct: 205 FEVYLGVSIYYLALTTAWSFLQEALEKR 232


>gi|51244882|ref|YP_064766.1| amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50875919|emb|CAG35759.1| probable amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 228

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 97/172 (56%), Gaps = 12/172 (6%)

Query: 223 YISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +IS ++ F  G+P L+L+ L Y         G F  +G +  +    +L + ++  +AA+
Sbjct: 60  FISLYVWFFRGVPILILMFLFY--------FGVFELLGLNLSALTTTALVLGMT--SAAY 109

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            ++I +  ++++P GQ+ AA ALG+   +A   ++LPQAMR  IP  +++Y  +LK+S+L
Sbjct: 110 QSQIFKGAILSLPHGQIRAAEALGMNRPQAICSIVLPQAMRVSIPAWSNEYSIILKDSAL 169

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  VG  D+ +    + ++T + + + +    +YL ++++    + RL  K+
Sbjct: 170 AYVVGAMDMFTRTHFVASRTYEHLTLFIFVGLLYLIITVIGVKVLARLEKKL 221


>gi|325271439|ref|ZP_08137964.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324103421|gb|EGC00743.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S   P   S      +A    T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRDSVFWPLLSSATFCACLAFGINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|171743316|ref|ZP_02919123.1| hypothetical protein BIFDEN_02447 [Bifidobacterium dentium ATCC
           27678]
 gi|283455711|ref|YP_003360275.1| glutamate transport system permease gluC [Bifidobacterium dentium
           Bd1]
 gi|171278930|gb|EDT46591.1| hypothetical protein BIFDEN_02447 [Bifidobacterium dentium ATCC
           27678]
 gi|283102345|gb|ADB09451.1| Glutamate transport system permease protein GluC [Bifidobacterium
           dentium Bd1]
          Length = 225

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +             G      K LPL  I  F++ G             
Sbjct: 29  LFSTILGVILVMMRISPVSSLRAVAGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EA+ AL
Sbjct: 76  -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEASRAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361
           GL+  ++   ++LPQA R  + PL +  + LLKNS++A A   A   S  +   I  ++ 
Sbjct: 131 GLSFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEYRSD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             + I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 191 VIVPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|29832824|ref|NP_827458.1| glutamine ABC transporter permease protein [Streptomyces
           avermitilis MA-4680]
 gi|29609945|dbj|BAC73993.1| putative polar amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 317

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 22/182 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+     ++ G+P     AL+ Q     PVL     +GG+           AL+  
Sbjct: 154 RGLPLIINLMIVVLGVP-----ALRLQGVTVDPVL-----LGGT-----------ALTLT 192

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+ R+G+ +V   Q  AA +LGLT+R+A R V+LPQA+R  +PPL +  ++L K
Sbjct: 193 YSAYVAEVFRAGIESVHPSQRAAARSLGLTNRQALRHVVLPQAVRRQVPPLLNDLVSLQK 252

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++ L    G  D V     I+ ++      I+  + ++++L+I +  F + + A++  + 
Sbjct: 253 DTGLVSIGGAVDAVRAADIIVGRSLNYTPYIVAGL-LFVALTIPMTRFTDWVTARMDRQR 311

Query: 397 KK 398
            +
Sbjct: 312 AQ 313


>gi|223933819|ref|ZP_03625787.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|330833683|ref|YP_004402508.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|223897502|gb|EEF63895.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|329307906|gb|AEB82322.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 21/208 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+++++  T L +       K +   YI  +++ G P LV +   Y + F  P 
Sbjct: 29  ILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVIFFGLPS 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG         V   F S  +  S  T A+ AE +R+ + +VP+GQ+EA  ++G++  + 
Sbjct: 83  LG--------IVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVGMSFAQT 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA R   PPL++  + L+K++SLA  +   ++      I  +T +        
Sbjct: 135 MRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPFA----- 189

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +Y  ++++  LF   L    A  EKK
Sbjct: 190 --LYCEVALVYLLFSTILTKLQAYGEKK 215


>gi|315181774|gb|ADT88687.1| arginine ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 229

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y        L   +FI    +SP F+S  IALS   A++ A+ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLFLITGDFI---EISP-FISGVIALSLIFASYAAQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+   +A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPGRAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K A++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDKKFAVQ 219


>gi|224369137|ref|YP_002603301.1| GlnP4 [Desulfobacterium autotrophicum HRM2]
 gi|223691854|gb|ACN15137.1| GlnP4 [Desulfobacterium autotrophicum HRM2]
          Length = 213

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP FMS  +AL   + A+  EI R  +++VP+GQM AA  +G+   KA R +++PQAMR 
Sbjct: 81  SP-FMSGALALGFASGAYQTEIFRGAILSVPQGQMTAARGIGMGRAKAIRCIIMPQAMRI 139

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADL 349
            IP L ++   +LK+SSL   +G  +L
Sbjct: 140 AIPSLINEVSLVLKDSSLVFVIGVPEL 166


>gi|239918032|ref|YP_002957590.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
 gi|281415789|ref|ZP_06247531.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
 gi|239839239|gb|ACS31036.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
          Length = 226

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 78/150 (52%), Gaps = 17/150 (11%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---ALKYQLHFDKP 249
           SFVLG+VL+LF     R     + +AL   Y++      L  ++L+   A+  QL     
Sbjct: 33  SFVLGVVLALF-----RISPVPSLRALGTGYVNVVRNTPLTIIMLLGVLAVWGQLKISFS 87

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                NF         F+   IALS Y AAF+ E +RSG+  VP GQ EAA ++GL    
Sbjct: 88  ADFTLNF---------FIYAVIALSLYHAAFMCEAIRSGVNTVPLGQAEAARSIGLGFLP 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           A R V+LPQA+R  I PL +  + L KN++
Sbjct: 139 AARHVILPQALRGAITPLGNTVIALTKNTT 168


>gi|89899770|ref|YP_522241.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89344507|gb|ABD68710.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 220

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 73/130 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +  S    L+ Y+  ++AE+ R+G+++VP+G  EA  A+GLT  +    +++P   R+++
Sbjct: 89  DIESFVATLAIYSGGYLAEVFRAGMLSVPKGLSEAGQAIGLTRMQIRFSIIMPIMFRNVL 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L S  ++L K++SLA A+   +L      I  ++ + +E  +I   +Y+    ++A+ 
Sbjct: 149 PALGSTVISLFKDTSLAAAIAVPELTYQARKINVESFRVVETWIIASLLYVCTCAVLAML 208

Query: 385 MNRLNAKIAL 394
             R+   +A+
Sbjct: 209 FRRVERHLAI 218


>gi|222080875|ref|YP_002540238.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725554|gb|ACM28643.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 220

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 24/185 (12%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G+  P L +  F+ FGLP++                       G T+   F +  IAL
Sbjct: 60  EVGRGAPALVLLQFIYFGLPSV-----------------------GLTIE-SFAAAVIAL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  T A+ +EI+R+ L ++  GQ EAA ALGL      R VLLPQ +R  +P L    + 
Sbjct: 96  AWNTGAYTSEIIRASLQSIAHGQREAAEALGLNRTDELRFVLLPQGLRVALPALLGFSIL 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + + +SL   +   +LVS    I + T +    +L    +Y  +SI  AL ++ +  + +
Sbjct: 156 IFQGTSLCFTIALPELVSRAYEIGSTTFRYFPALLCAGALYACISIPAALLVSHVEKRAS 215

Query: 394 LKEKK 398
           L  + 
Sbjct: 216 LYAQH 220


>gi|171318960|ref|ZP_02908090.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171095845|gb|EDT40789.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 241

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 94  PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q++ L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|167646871|ref|YP_001684534.1| polar amino acid ABC transporter inner membrane subunit
           [Caulobacter sp. K31]
 gi|167349301|gb|ABZ72036.1| polar amino acid ABC transporter, inner membrane subunit
           [Caulobacter sp. K31]
          Length = 218

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 18/157 (11%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             V+G  L+L   RLSR    +   A+   Y+S   I G P LV + L Y   +  P LG
Sbjct: 33  GLVIGFGLALM--RLSRSPLLRWPAAI---YVSA--IRGTPLLVQLFLIY---YGLPQLG 82

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                      P  ++  I  S    A+  EI+RS + AV +GQ EAA  LG++  +A R
Sbjct: 83  --------VQLPPLLAAGIGFSINIGAYAGEILRSAIAAVDKGQWEAASVLGMSRGQALR 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            V+LPQA R+ + PL++ +++L+K++SLA  +   +L
Sbjct: 135 RVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPEL 171


>gi|94500103|ref|ZP_01306637.1| ABC-type arginine transport system, permease component
           [Oceanobacter sp. RED65]
 gi|94427676|gb|EAT12652.1| ABC-type arginine transport system, permease component
           [Oceanobacter sp. RED65]
          Length = 220

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 11/186 (5%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVS-----PE 265
           KT + +   Y  T LI G+P LVL+ L +   Q+ F+        F     +       E
Sbjct: 30  KTAQVVATTY--TTLIRGVPDLVLMMLIFFGGQIAFNS-FTEWLYFASDEQIDIFINIDE 86

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I +     A++ E  R   IAV  GQ+EAA A G+   +    ++ PQ MR  +P
Sbjct: 87  FVAGVITIGFIFGAYMTETFRGAFIAVDVGQIEAAKAYGMNRWQVFTRIMFPQMMRHALP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +  LLK ++L   +G AD+V +       TG+    ++   F+YL L+ +     
Sbjct: 147 GLGNNWQVLLKTTALVSVIGLADMVRLATEAAKTTGEPFLFLIPVAFVYLMLTAISEWVF 206

Query: 386 NRLNAK 391
            RL  +
Sbjct: 207 KRLKKR 212


>gi|33592663|ref|NP_880307.1| glutamine ABC transporter permease protein [Bordetella pertussis
           Tohama I]
 gi|33601951|ref|NP_889511.1| glutamine ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
 gi|33572309|emb|CAE41863.1| glutamine transport system permease protein [Bordetella pertussis
           Tohama I]
 gi|33576389|emb|CAE33467.1| glutamine transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 67/116 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR  L++V +G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK
Sbjct: 101 SGAYIAEIVRGSLLSVHKGLKEAGQAMGLPFYKILLYIIGPVAFRRMIPPLGNQCIISLK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SSL + +G A+L   G  I+    +A+EI      +YL L+  +AL +  L  ++
Sbjct: 161 DSSLFIVIGVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGTMALGLRMLEKRM 216


>gi|312864574|ref|ZP_07724805.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus downei F0415]
 gi|311099701|gb|EFQ57914.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus downei F0415]
          Length = 216

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 52/73 (71%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL A+ +GQ EA ++ G T  +  R+++LPQA+R ++P + SQ+
Sbjct: 87  AFTIFTSAALAEIIRGGLNAIDQGQTEAGLSQGFTQFQVLRIIVLPQAIRKMLPSIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 147 VTVVKDTSFLYSV 159



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T +L+F  ++ +TI G ++   R   NK+V  I  +Y+E  RN+P L+ IF ++
Sbjct: 16  GLWTTIYLSFIIIVLSTIFGMILAVMRNGKNKIVKLIASIYIEFVRNVPNLLWIFIVF 73


>gi|238020541|ref|ZP_04600967.1| hypothetical protein GCWU000324_00427 [Kingella oralis ATCC 51147]
 gi|237867521|gb|EEP68527.1| hypothetical protein GCWU000324_00427 [Kingella oralis ATCC 51147]
          Length = 227

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 53/79 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA S    A+ +E VR+ +++VP+GQ EA  ++G+T+ +  R +++PQA+R  +PPL++ 
Sbjct: 100 IAFSLNVGAYGSETVRAAILSVPKGQWEAGFSIGMTYMQTFRRIIVPQALRVAVPPLSNS 159

Query: 331 YLNLLKNSSLAVAVGFADL 349
           ++ L K +SLA  V   +L
Sbjct: 160 FIGLFKETSLASFVTVTEL 178


>gi|225025465|ref|ZP_03714657.1| hypothetical protein EIKCOROL_02363 [Eikenella corrodens ATCC
           23834]
 gi|224941749|gb|EEG22958.1| hypothetical protein EIKCOROL_02363 [Eikenella corrodens ATCC
           23834]
          Length = 229

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 73/121 (60%), Gaps = 2/121 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A++++E +R+GL++VP+GQ+EAA A+GL+  +  R V+LPQA    +P + +  L L+K 
Sbjct: 108 ASYMSEALRAGLLSVPKGQVEAAKAIGLSRWQVFRFVVLPQAWAVSVPAVGANVLFLIKE 167

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +S+  AV  A+L+ V   II    +  E +L+    YL + + ++L      A+  L+E 
Sbjct: 168 TSVVSAVAVAELMFVTKDIIGMDYKTNEALLLLFISYLIILLPVSLLARW--AERRLREA 225

Query: 398 K 398
           K
Sbjct: 226 K 226


>gi|254362205|ref|ZP_04978320.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|153093777|gb|EDN74716.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
          Length = 238

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS  +I G P LV I + +   +  P +G F       + P   ++ I  S    A+ +
Sbjct: 76  YIS--IIRGTPMLVQICIVF---YGLPAIGIF-------IDPIPAAI-IGFSLNIGAYGS 122

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ + +VP+GQ EA   +G+T+ +  R ++ PQA R  +PPL++ ++ L K++SLA 
Sbjct: 123 ETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLAS 182

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            V   ++  V   + N +   + + +    IY     ++ L   RL  +
Sbjct: 183 VVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFLIQARLEVR 231


>gi|170732943|ref|YP_001764890.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169816185|gb|ACA90768.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 241

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 17/165 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VLG+ L + A  L+R       + L L +I  F    +P L+LI   Y   F  PVL   
Sbjct: 42  VLGVALGV-AMALAR----GPARVLLLAFIGFFR--AIPVLMLIFWTY---FLMPVLLHM 91

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +  G +TV         AL+    A++A  V +G++A   GQ +A ++LGLT  +  R V
Sbjct: 92  DVPGLATV-------VCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYV 144

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           LLPQA+R + P   +Q++ L+K++SLA  VG  +L  V   + N+
Sbjct: 145 LLPQAIRIMRPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|91783310|ref|YP_558516.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91687264|gb|ABE30464.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 18/209 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +F  + G VL+L         H +    +  +Y+S  ++ G P LV I   + +++  P
Sbjct: 29  MIFGLIAGAVLALMGVS-----HSRALNWIARIYVS--VMRGTPLLVQI---FVIYYGLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             G        ++ P    + IALS   AA+++E +R  ++ + +GQ  AA +LGL+ R+
Sbjct: 79  SFG-------ISLDPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQ 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L 
Sbjct: 131 TLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +Y  L  M+         ++AL  + 
Sbjct: 191 AAAVYWVLCQMLESVQRWYERRLALPSRH 219



 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T   A   MI   I G ++    +S ++ + WI R+YV V R  P LV IF +Y  
Sbjct: 17  GAVLTIKFAVLSMIFGLIAGAVLALMGVSHSRALNWIARIYVSVMRGTPLLVQIFVIYYG 76

Query: 152 V----LSVLPIPDHSIVL 165
           +    +S+ P P   I L
Sbjct: 77  LPSFGISLDPTPAGVIAL 94


>gi|330831727|ref|YP_004394679.1| putative amino-acid ABC transporter permease YckJ [Aeromonas
           veronii B565]
 gi|328806863|gb|AEB52062.1| Probable amino-acid ABC transporter permease protein YckJ
           [Aeromonas veronii B565]
          Length = 222

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 81/133 (60%), Gaps = 10/133 (7%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L +LYIS F   G P LV + L   L++  P L    F+G       F +  + L+ + A
Sbjct: 55  LAMLYISFFR--GTPLLVQLFL---LYYGLPQLFPI-FVGMDA----FTAAIVGLTLHFA 104

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AE +R+ ++ + + QMEAA+++G++  +A + ++LPQA R   P L + +++++K++
Sbjct: 105 AYMAESIRAAILGIHKSQMEAALSIGMSRYQAMQRIILPQAARIATPSLMNYFIDMIKST 164

Query: 339 SLAVAVGFADLVS 351
           SLA  +G A+++ 
Sbjct: 165 SLAFTLGVAEIMG 177


>gi|222151671|ref|YP_002560827.1| ABC-type amino acid transport system permease component
           [Macrococcus caseolyticus JCSC5402]
 gi|222120796|dbj|BAH18131.1| ABC-type amino acid transport system permease component
           [Macrococcus caseolyticus JCSC5402]
          Length = 242

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 107/199 (53%), Gaps = 13/199 (6%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS---- 260
           T L R    K  +++  +Y+S  +I G P LV +   + + +  P +G+   I G+    
Sbjct: 52  TALMRVSRNKFARSIARIYVS--IIRGTPMLVQL---FIIFYGIPEVGRL--ITGNPDIK 104

Query: 261 -TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             ++P   ++ I LS    A+ +EI+R G++++P GQ EAA ++G++     + ++LPQA
Sbjct: 105 LNIAPVVAAI-IGLSLNVGAYASEIIRGGILSIPDGQKEAAYSIGMSEWMTMKRIVLPQA 163

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  IP L + +L+L+K++SL   +  A++      +   T + + I ++   +Y  +  
Sbjct: 164 IRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVAATTYEFLSIYVLVGLMYWIVCF 223

Query: 380 MIALFMNRLNAKIALKEKK 398
           +I++   +  ++I  K ++
Sbjct: 224 IISVVQGQYESRIERKYQR 242


>gi|302384917|ref|YP_003820739.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302195545|gb|ADL03116.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 220

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 59/104 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS  T AF++E +R  L +V  GQ EAA  LG+T  +    ++LPQA R  +P L + 
Sbjct: 95  LVLSLNTGAFMSESIRGALFSVEPGQKEAAAMLGMTELQTILRIVLPQAFRVALPSLFND 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            +NLLK +SLA  +G  D++    +   Q+ +  EI L  M IY
Sbjct: 155 LINLLKATSLAFMLGIRDVMGQAKSEGAQSFRYFEIYLAVMLIY 198


>gi|319762081|ref|YP_004126018.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317116642|gb|ADU99130.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 221

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 30/223 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPT 234
           +T+      F+ S  +G+VL+L             GK  P+  +S        +I GLP 
Sbjct: 21  VTVQVTVLSFLLSSAIGLVLAL-------------GKLSPVRAVSVCASTVINVIRGLPI 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   + ++F  P +G    I  S      + L IA S Y A    E  R+G+ AV  
Sbjct: 68  IVQL---FYIYFVLPDIG----IQLSAFQAGVIGLGIAYSAYQA----ENFRAGIEAVDP 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA+A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   G 
Sbjct: 117 GQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQ 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I + T Q + +  +   +YL++S+ +   + RL  +     K
Sbjct: 177 LIASSTFQNMTVYTLVALLYLAMSLPLVWSLRRLERRFGAGRK 219


>gi|326779151|ref|ZP_08238416.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces cf. griseus XylebKG-1]
 gi|326659484|gb|EGE44330.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces cf. griseus XylebKG-1]
          Length = 243

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 64/112 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+VR  + +VPRGQ EAAIAL L+  +    V+LPQA   +IP  T+  + LLK 
Sbjct: 101 GAYGAEVVRGAINSVPRGQYEAAIALNLSPSRRLWKVILPQAWVQMIPSFTNLLIQLLKA 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + L   +  ADL++V   + ++TG+ +   L  +  Y  L+  + + MN L 
Sbjct: 161 TPLLWLISAADLMTVIQQLRDRTGETLTAYLTLLAAYFVLAYALTMLMNLLE 212


>gi|302024590|ref|ZP_07249801.1| amino-acid ABC transporter permease protein [Streptococcus suis
           05HAS68]
          Length = 219

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 21/208 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+++++  T L +       K +   YI  +++ G P LV +   Y + F  P 
Sbjct: 29  ILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVIFFGLPS 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG         V   F S  +  S  T A+ AE +R+ + +VP+GQ+EA  ++G++  + 
Sbjct: 83  LG--------IVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVGMSFAQT 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA R   PPL++  + L+K++SLA  +   ++      I  +T +        
Sbjct: 135 MRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPFA----- 189

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +Y  ++++  LF   L    A  EKK
Sbjct: 190 --LYCEVALVYLLFSTILTKLQAYGEKK 215


>gi|254430539|ref|ZP_05044242.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Cyanobium sp. PCC 7001]
 gi|197624992|gb|EDY37551.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Cyanobium sp. PCC 7001]
          Length = 418

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 64/93 (68%), Gaps = 5/93 (5%)

Query: 251 LGQ--FNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQ    F+    ++PE  + + ++ L+ + AA++AE VRSGL AVP+GQ EAA +LGL 
Sbjct: 262 LGQNILGFLLPGGLAPERVWRAAWV-LTFFAAAYLAEAVRSGLAAVPKGQREAARSLGLG 320

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
             +  R V+LPQA+R  +P + SQ+++LL++++
Sbjct: 321 PLQTLRHVVLPQALRVALPVMVSQFISLLQDTT 353


>gi|262274234|ref|ZP_06052046.1| ABC polar amino acid transporter inner membrane protein [Grimontia
           hollisae CIP 101886]
 gi|262222044|gb|EEY73357.1| ABC polar amino acid transporter inner membrane protein [Grimontia
           hollisae CIP 101886]
          Length = 201

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 83/142 (58%), Gaps = 12/142 (8%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           F  K   A+ ++YIS F   G P LV L  L Y L    P+     F+G       F + 
Sbjct: 24  FKVKGLDAVVIVYISFFR--GTPLLVQLFLLYYGLPQVFPI-----FVGMDA----FTAA 72

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I LS + +A++AE +R  ++ + + QMEA++++G+T  +A + ++LPQA R   P L +
Sbjct: 73  VIGLSLHFSAYMAESIRGAILGIDKHQMEASLSVGMTEIQAMQRIILPQAARVATPSLMN 132

Query: 330 QYLNLLKNSSLAVAVGFADLVS 351
            +++++K++SLA  +G A++++
Sbjct: 133 YFIDMIKSTSLAFTLGVAEIMA 154


>gi|158425496|ref|YP_001526788.1| putative amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332385|dbj|BAF89870.1| putative amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 235

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 31/188 (16%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGL 232
           GL+  TL   T     + S +LG++ +L +   R S H + +  +A+PL+    F+ F L
Sbjct: 20  GLAVVTLLFST-----LVSLILGVMATLHSRMLRWSIHGYVEFFRAIPLIVNVFFVYFVL 74

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           PTL                       G  +SP F ++   L+ + +A   EIVR+G+ AV
Sbjct: 75  PTL-----------------------GLDLSP-FAAVVFGLTLWGSANGIEIVRAGIEAV 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q  +A ALG+   +    ++ PQA+R I+PP T     L++ +SL   VG  + + V
Sbjct: 111 PAHQWRSAWALGMRQWEVYWHIVAPQAIRLIVPPFTGLLTLLVQATSLGALVGVTEFLKV 170

Query: 353 GGTIINQT 360
           G  II ++
Sbjct: 171 GQIIIERS 178


>gi|329117370|ref|ZP_08246087.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907775|gb|EGE54689.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 213

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 55/91 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L ++  +  R ++LPQ  + ++P + ++
Sbjct: 89  LAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKVLKMSQLQTIRHIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|306823261|ref|ZP_07456637.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309801906|ref|ZP_07696021.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|304553893|gb|EFM41804.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308221462|gb|EFO77759.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 225

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +             G      K LPL  I  F++ G             
Sbjct: 29  LFSTILGVILVMMRISPVSSLRAVAGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EA+ AL
Sbjct: 76  -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEASRAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQTG 361
           GL+  ++   ++LPQA R  + PL +  + LLKNS++A A   A   S  +   I  ++ 
Sbjct: 131 GLSFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEYRSD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             + I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 191 VIVPIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|293375605|ref|ZP_06621879.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292645822|gb|EFF63858.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 225

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 17/192 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +    + S VLG+V+ +F          K  + +  LY++T  I  +P LVL+ L
Sbjct: 24  VTLEISLISVMISVVLGLVMGMFM-----RVKTKVVRLICRLYLNTVRI--VPQLVLLFL 76

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y     K          G  +S E  S+ +  S +  A + ++VR  L ++P+ Q E A
Sbjct: 77  AY-FGLSKSF--------GINLSGEVASI-LVFSFWGIAEMGDLVRGALDSIPKHQYETA 126

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +A+GL  R+  + +++PQ +R ++P   +    ++K +SL V +G  ++V VG  II  +
Sbjct: 127 LAIGLNQRQIYQYIIIPQTIRRLLPQTINLVTRIIKTTSLIVLIGVVEVVKVGQQIIEAS 186

Query: 361 GQAIEIILIWMF 372
              +    +W++
Sbjct: 187 RLTVPTAALWIY 198


>gi|206558855|ref|YP_002229615.1| putative amino acid ABC transporter permease [Burkholderia
           cenocepacia J2315]
 gi|198034892|emb|CAR50764.1| putative amino acid ABC transporter permease protein [Burkholderia
           cenocepacia J2315]
          Length = 226

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G++L+ F   L+R F  +  +A+   YI  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLLLA-FGAALTRLFGPRWAQAVVRFYI--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T  +A R
Sbjct: 84  --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +P L++ +++L+K++SLA  +   ++      I   T + + +      
Sbjct: 136 RAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAAL 195

Query: 373 IYLSLSIMIALFMNRLNAK 391
           IYL  S +++    RL  +
Sbjct: 196 IYLLFSSVLSTLQRRLETR 214


>gi|330809875|ref|YP_004354337.1| Amino-acid ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377983|gb|AEA69333.1| Amino-acid ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 242

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 10/131 (7%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+     +L+  L      LG + +I    ++P F++  I L     A+
Sbjct: 67  TTLIRGVPDLVLMLLIFYSLQTWLTVITVALG-WEYI---EINP-FVAGIITLGFIYGAY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R  ++AVPRGQ+EAA A GL+  +  R V+ PQ MR  +P L + ++ +LK ++L
Sbjct: 122 FTETFRGAMLAVPRGQVEAATAYGLSRAQRFRFVVFPQMMRFALPGLGNNWMVILKATAL 181

Query: 341 AVAVGFADLVS 351
              +G ADLV 
Sbjct: 182 VSIIGLADLVK 192


>gi|324997392|ref|ZP_08118504.1| glutamate permease [Pseudonocardia sp. P1]
          Length = 292

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 56/85 (65%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++ + L  Y  + +AE+ R+G+ AVPRGQ EAA ALGL   +    VLLPQA RS++P
Sbjct: 136 FWAVVLGLMLYNGSVLAEVFRAGVNAVPRGQREAAYALGLRKTQVMTNVLLPQAFRSMLP 195

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            + SQ + +LK+++L   + + +L+
Sbjct: 196 TILSQLVVVLKDTALGFIILYPELL 220


>gi|300868202|ref|ZP_07112834.1| Polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
 gi|300333826|emb|CBN58018.1| Polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
          Length = 478

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 89/158 (56%), Gaps = 19/158 (12%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLG 252
           F+ GIVLSLF  ++S      T K L L       IF G P ++ + L Y   F  P L 
Sbjct: 293 FIWGIVLSLF--KIS------TIKPLSLFANGYTSIFRGTPLILQLTLVY---FATPQLT 341

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            +N    S +    ++ ++     + A+I+E +R+G+ AV +GQ EAA +LG+ ++    
Sbjct: 342 GYNI---SALQAGVITFFLN----SGAYISETIRAGIQAVDKGQKEAAESLGVPYKLMMG 394

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            ++LPQA+++I+P L ++ + LLK+S+L   +G  DL+
Sbjct: 395 DIILPQALKNILPALVNESIALLKDSALVSVIGVEDLL 432


>gi|222102300|ref|YP_002546890.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84]
 gi|221728417|gb|ACM31426.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84]
          Length = 222

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 11/149 (7%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + L+F  P LG    +  + V        I  S   AA+ +E VR+ +++VP  Q EAA+
Sbjct: 68  FWLYFAAPFLGMQLSVWEAAV--------IGCSLTHAAYSSEYVRAAVLSVPVSQTEAAV 119

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           AL ++  +  R V+LPQA+ +++P + ++++ LLK +S+   +G A+L     +II  T 
Sbjct: 120 ALSMSAFQRVRYVVLPQALVALLPLMGNEFVMLLKGTSIVSLIGLAELTEQAHSIIVSTY 179

Query: 362 QAIEIILIWMFIYLSLS---IMIALFMNR 387
           Q + ++L  + IY  L+   I +  +M R
Sbjct: 180 QPVPVLLTVLGIYFILAQALIRLTQWMER 208


>gi|299530121|ref|ZP_07043547.1| amino acid ABC transporter, permease protein PEB1 [Comamonas
           testosteroni S44]
 gi|298721778|gb|EFI62709.1| amino acid ABC transporter, permease protein PEB1 [Comamonas
           testosteroni S44]
          Length = 266

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 2/123 (1%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L I LS  TAA +AE+ R+G++AVPRGQ +AA +LGLT  +    V+ PQA+R I+P 
Sbjct: 142 LTLPIGLS--TAAVVAEVYRAGVLAVPRGQTDAARSLGLTEVQVFFFVVFPQALRYIVPA 199

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q + ++K+++    V + +L+     +I      + + L+   +Y  ++  I+    
Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQNAKVLIANYHSLVPVYLVVAALYCLVNYAISKASQ 259

Query: 387 RLN 389
           RL 
Sbjct: 260 RLG 262


>gi|241895500|ref|ZP_04782796.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871246|gb|EER74997.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 220

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 5/110 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +  ++AF++E+ RS  +AV +GQ +AA +LGL +RK  R V+ PQ  R  IP L + 
Sbjct: 98  IAFTISSSAFVSEVYRSSFLAVGQGQWDAAYSLGLPYRKVVRKVIFPQVFRISIPALGNI 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYL 375
            L+L K +SLA  +  +++      I       + I     IL W F +L
Sbjct: 158 LLDLFKGTSLAAMITVSEMFMKAQIIAGADQDYMTIYIMIAILYWFFCWL 207


>gi|313905462|ref|ZP_07838826.1| polar amino acid ABC transporter, inner membrane subunit
           [Eubacterium cellulosolvens 6]
 gi|313469646|gb|EFR64984.1| polar amino acid ABC transporter, inner membrane subunit
           [Eubacterium cellulosolvens 6]
          Length = 218

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S  F++  +A     + + +EI R G+ ++P GQ EA   LG+T  +  R V+L Q
Sbjct: 82  GLGLSGRFIAALVAFVINYSCYFSEIYRGGIQSIPVGQYEAGQVLGMTKGQIFREVVLLQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            ++ I+PP++++ + L+K++SLA  +  A+++  G       G      LIW   Y    
Sbjct: 142 VIKRIVPPMSNEIITLVKDTSLANVISVAEIIFTGNAFSKSNG------LIWPLFY--TG 193

Query: 379 IMIALFMNRLNAKIALKEKK 398
           +   LF   L    +  EKK
Sbjct: 194 VFYLLFSGVLTMAFSFIEKK 213


>gi|295699312|ref|YP_003607205.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438525|gb|ADG17694.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 216

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 1/134 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP   ++  A+S  +A++IAEI+R G +++P G +EAA  LGL+     R +L+PQ
Sbjct: 81  GINVSPIVAAIS-AVSLCSASYIAEILRGGFLSIPPGHLEAARMLGLSPLDTLRRILVPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +P L ++ + L+K SSL   VG A+L      I   T + +E  +    IY  + 
Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYVAAGLIYFVIC 199

Query: 379 IMIALFMNRLNAKI 392
             +AL  +    ++
Sbjct: 200 GSLALVAHAAEHRL 213


>gi|170740014|ref|YP_001768669.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168194288|gb|ACA16235.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 223

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 75/123 (60%), Gaps = 1/123 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P+  +L +AL     A+  EI+R+G+ ++  GQ+EA   LGL   +  R V+L  
Sbjct: 84  GLRLDPDSAAL-LALVVNVGAYGIEIIRAGIESIDHGQIEAGRTLGLRPLQIFRYVVLKP 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+++I P LTSQ++ L+ NSS+  A+  ++L +  G I ++  ++ E+ L+   IY +LS
Sbjct: 143 AIQAIYPSLTSQFILLMLNSSVCSAIAASELTAAAGDIQSRNFRSFEVYLVVTGIYFALS 202

Query: 379 IMI 381
           +++
Sbjct: 203 VVL 205


>gi|209518796|ref|ZP_03267610.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209500766|gb|EEA00808.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 226

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 70/121 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E++R  + ++P+GQ EAA ++G+T  +A R V+LPQA R  +PPL++ 
Sbjct: 94  IGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTRAEALRRVILPQAARVALPPLSNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K++SLA  +   ++      I + T + + +      +YL  S +++    RL  
Sbjct: 154 FISLVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTQAALVYLLFSSVLSSVQVRLEQ 213

Query: 391 K 391
           +
Sbjct: 214 R 214


>gi|297199263|ref|ZP_06916660.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
 gi|197716445|gb|EDY60479.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
          Length = 249

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 67/112 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  ++L  + AA+++EI RS +  V  GQ EA  ALGL        ++LPQA+R  +P
Sbjct: 89  FTAGCLSLVVFYAAYLSEIFRSAISGVHAGQTEAGEALGLGRAGIFGHIVLPQAVRQALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
              +  ++LLK++SL V V  A+L+S G  I + T +A+E+ L+   IY +L
Sbjct: 149 GTNTMLVDLLKSTSLLVTVSAAELMSEGRLITSATFRALEVYLVISAIYFAL 200


>gi|21910444|ref|NP_664712.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28896019|ref|NP_802369.1| amino acid ABC transporter (permease protein) [Streptococcus
           pyogenes SSI-1]
 gi|21904642|gb|AAM79515.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28811269|dbj|BAC64202.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes SSI-1]
          Length = 213

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +  R ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTATNRDA 179


>gi|86153641|ref|ZP_01071844.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|85842602|gb|EAQ59814.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni HB93-13]
          Length = 233

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 82  DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D  +  A    F+   WL    +F G+I + IIG           K++  IC++Y+E  R
Sbjct: 2   DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61

Query: 138 NIPPLVVIFFLYKSV 152
           N P L+ +FFLY ++
Sbjct: 62  NTPLLIQLFFLYYAL 76


>gi|209543091|ref|YP_002275320.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530768|gb|ACI50705.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 243

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 62/119 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS   AA++AEI+R+GL AVP GQ+ AA ALG+   + +  +  PQA R IIPPL + 
Sbjct: 96  IGLSLNEAAYLAEIIRAGLNAVPPGQIAAARALGMDEWQISSRIAFPQAFRLIIPPLGNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
              LLK +S+   +   +L+     ++      +E+  +    YL ++        R+ 
Sbjct: 156 VNGLLKTTSVTSVISMEELMQRSQILVQDQFMVLELFSVAALYYLFMTTAWDFLQRRIE 214


>gi|241554175|ref|YP_002979388.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863481|gb|ACS61143.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 229

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A GL+     R + LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGLSPWMLIRRIWLPRAIRIALPTIAGEIVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +L+    YL+L+ +IA     L A++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAQVPVRR 229


>gi|118471268|ref|YP_887851.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Mycobacterium smegmatis str. MC2 155]
 gi|118172555|gb|ABK73451.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mycobacterium smegmatis str. MC2 155]
          Length = 237

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 70/128 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+ AEIVR  + + PRGQ EAA+ALG+   +  R +L+PQ++  ++P   + 
Sbjct: 90  VVLGLNEGAYAAEIVRGAIASRPRGQTEAAVALGMKPAQRMRRILVPQSIPVMLPSFGNV 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++LLK + L   +G AD  + G  I  +T     I+L  + +Y  L++++A     L  
Sbjct: 150 AVDLLKATPLVYFIGVADFTANGLAIRTETQDTTTILLTLLVVYFILALILAAITRWLEN 209

Query: 391 KIALKEKK 398
           +  L+ ++
Sbjct: 210 RFGLEHRR 217


>gi|57237521|ref|YP_178535.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni RM1221]
 gi|205355341|ref|ZP_03222112.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|57166325|gb|AAW35104.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni RM1221]
 gi|205346575|gb|EDZ33207.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315057887|gb|ADT72216.1| Amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 233

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 82  DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D  +  A    F+   WL    +F G+I + IIG           K++  IC++Y+E  R
Sbjct: 2   DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61

Query: 138 NIPPLVVIFFLYKSV 152
           N P L+ +FFLY ++
Sbjct: 62  NTPLLIQLFFLYYAL 76


>gi|27381501|ref|NP_773030.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354669|dbj|BAC51655.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 222

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 65/113 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  EI+R G+ ++ +GQ+EA  ALGL   +  R ++L  A+R+  P LT Q
Sbjct: 95  IALGVNGGAYAIEIIRGGVQSIHKGQIEAGYALGLHKGQVFRFIVLKPALRASYPSLTGQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           ++ L   SS+  AV   +L SV   I + T ++ E+     F+YL++S ++ L
Sbjct: 155 FIMLTLTSSICSAVSAYELTSVAQRIESDTFRSFEVYFSVTFLYLAISWLLML 207



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 6/65 (9%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV---YVEVFRNIPPLVV 144
           A+L G V T  LA +GM  A +IG    AG  + +   AW+  +   +VE+ RN P LV 
Sbjct: 16  ALLWGCVGTLGLALAGMTLAMMIGV---AGVAARDAKAAWLRALVISFVEIVRNTPFLVQ 72

Query: 145 IFFLY 149
           IFFL+
Sbjct: 73  IFFLF 77


>gi|300697250|ref|YP_003747911.1| amino acid ABC transporter permease [Ralstonia solanacearum
           CFBP2957]
 gi|299073974|emb|CBJ53511.1| amino acid ABC transporter, permease protein [Ralstonia
           solanacearum CFBP2957]
          Length = 262

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++P F ++ I LS + AAF AE +R+G+ AVP   +EAA +LG   R+    V LP A+R
Sbjct: 112 LAPLFWAVAI-LSLHKAAFHAEALRAGIEAVPPAMLEAAASLGFGARERLWRVQLPLALR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + +P L +  + L+K SSLA A+   +L      I  Q G A+E +++ +  Y
Sbjct: 171 AALPSLMNNTVELVKASSLASAIAVGELTYSALMIWTQRGNALECMVLLLLFY 223


>gi|296533472|ref|ZP_06896051.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296266198|gb|EFH12244.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 223

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 38/212 (17%)

Query: 170 FLNNR--GLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG----- 216
           FLN    G ++P L      T+  +A       V G++L+L +T   R            
Sbjct: 8   FLNGEILGQAWPILWQGFLYTLGLSAMTVPLGLVGGVMLALLSTAGPRSIRWLAAGWTDL 67

Query: 217 -KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +A+P L +  FL  GLP            F    +G +  +             I    
Sbjct: 68  FRAIPPLVLLVFLYAGLP------------FAGLDVGAWGAVA------------IGFFL 103

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A+  E++R+G+ +VPRGQMEAA + GL   +A   V+LPQA+R+++P L S  L ++
Sbjct: 104 NTGAYYGEVLRAGIESVPRGQMEAARSTGLNRAQALAHVVLPQAVRNVLPDLVSNTLEVV 163

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           K +S+A  V   +L+       N T  A  I+
Sbjct: 164 KLTSIASVVALPELLFQARQAQNATYNATPIV 195


>gi|260881811|ref|ZP_05405274.2| L-cystine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
 gi|260847944|gb|EEX67951.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
          Length = 239

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 66/123 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ +T A+++EI R+ L +VP+GQ EAA A+G+T  +  R V+ PQA+   +P   +Q
Sbjct: 110 IGLTLHTGAYLSEIFRAALDSVPQGQFEAAEAMGMTSFQMYRRVIFPQAIVFALPLFANQ 169

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L+ +K++S+   +   ++            Q  E  ++   +Y  + I+      +L  
Sbjct: 170 FLSTMKSTSIVFVITVIEVFGAAKLFCEDNSQYFEAYIVAALLYWGMGILFEYLFTKLED 229

Query: 391 KIA 393
           +++
Sbjct: 230 RLS 232


>gi|54309259|ref|YP_130279.1| arginine transporter permease subunit ArtQ [Photobacterium
           profundum SS9]
 gi|46913691|emb|CAG20477.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum SS9]
          Length = 229

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  IALS   A++ A+ +R  L AV  GQ EAA ALG++   +   ++LPQA+R
Sbjct: 87  ISP-FVSGVIALSLIFASYAAQTIRGALKAVNNGQREAASALGISKAHSFFRIILPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P LT+Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLL 174



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 39/67 (58%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y+ +++     T  LAF+ ++   ++  +  +G +S ++LVAW    +V + R +P +
Sbjct: 4   SGYSMSLVEASWMTIQLAFASLLVGLVLAVIFASGEMSRSRLVAWPTTAFVTILRGLPEI 63

Query: 143 VVIFFLY 149
           +V+ F++
Sbjct: 64  LVVLFIF 70


>gi|157825310|ref|YP_001493030.1| amino acid ABC transporter permease protein [Rickettsia akari str.
           Hartford]
 gi|157799268|gb|ABV74522.1| amino acid ABC transporter permease protein [Rickettsia akari str.
           Hartford]
          Length = 218

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +   V+G++L++       A RL  +F+    +  PLL   T + F  P +  I +K+ +
Sbjct: 31  ILGLVIGMLLAICKVNKNRALRLCANFYTSIFRGTPLLIQLTIIYFASPYI--IGVKFSV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                FM+  IA S  + A+++E++R+G+ AV +GQ EAA AL 
Sbjct: 89  ---------------------FMAGAIAFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +      + ++LPQA+++I P L ++ +NL+K S++   +G  DL+
Sbjct: 128 IPKFLIMKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173


>gi|327470643|gb|EGF16099.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 219

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRFIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|325265330|ref|ZP_08132055.1| amino acid ABC transporter, permease protein [Clostridium sp. D5]
 gi|324029509|gb|EGB90799.1| amino acid ABC transporter, permease protein [Clostridium sp. D5]
          Length = 218

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 74/132 (56%), Gaps = 1/132 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T S    ++ IA +   AA+ AEI R G+ ++P GQ EAA  LG    +    ++ PQ +
Sbjct: 84  TASYRLTAVLIAFAINYAAYFAEIYRGGIESMPVGQYEAAKLLGYNRVQTFFRIIFPQVI 143

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + I+P +T++ + L+K++SLA A+ +A++ +    I       + ++   +F YL  +++
Sbjct: 144 KRILPSVTNEVITLVKDTSLAFAIAYAEMFTTAKQIAASQTSIVPLVAAGIFYYL-FNLI 202

Query: 381 IALFMNRLNAKI 392
           +A+ M  +  K+
Sbjct: 203 VAVVMEFIEKKL 214



 Score = 39.7 bits (91), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP---PLVVIFF 147
           G + T  + FS ++ +  +G LV  GR+S  K++ WI +VY+ + R  P    L+V++F
Sbjct: 15  GMIGTIGIFFSTVLFSLPLGLLVAFGRMSRIKVIQWIAKVYISIMRGTPLMLQLMVVYF 73


>gi|320546926|ref|ZP_08041228.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448444|gb|EFW89185.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 230

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 57/89 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++    A I+E+ +S   A+P+GQ+EA +++GLT  +    +LLPQA R  +P + + 
Sbjct: 102 LAMTLLFGASISEVFKSSYQALPKGQLEAGLSIGLTEYQTFIRILLPQAFRIALPNIVTA 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +NLLK+ +LA  +G  DL+  G  II++
Sbjct: 162 IINLLKDIALAYTIGLVDLMGEGNLIISR 190


>gi|239834034|ref|ZP_04682362.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822097|gb|EEQ93666.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 240

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 7/139 (5%)

Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           + P L Q  FI       G  +SP   +L +AL     A+  EI+R+G+ ++ +GQ+EA 
Sbjct: 83  NTPFLVQIFFIFFGLPSAGLRLSPNSAAL-LALIVNFGAYGTEIIRAGIESIHKGQVEAG 141

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL+  +  R V++  A+R++ P LTSQ++ L+  SS+   +   +L + G  + + T
Sbjct: 142 TALGLSRLQVFRYVIMKPALRTVYPSLTSQFIYLMLTSSVVSVISANELAAAGNDLQSAT 201

Query: 361 GQAIEIILIWMFIYLSLSI 379
             + E+ ++   +YL +SI
Sbjct: 202 FASFEVYIVITLMYLVMSI 220



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  L+ + M+   I+  +   G+ S  K V ++   Y+E+ RN P LV IFF+
Sbjct: 34  LLVGAWQTIELSCAAMVLGLIVSIICAVGKTSGPKPVRFVIDAYIEIIRNTPFLVQIFFI 93

Query: 149 Y 149
           +
Sbjct: 94  F 94


>gi|227529679|ref|ZP_03959728.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350469|gb|EEJ40760.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 227

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 111/235 (47%), Gaps = 33/235 (14%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVF------SFVLGIVLSLFATRLSRHFHEKTGKALP 220
           F M LN      P+L       + +F      S  LGI++SL            T K  P
Sbjct: 11  FKMSLNYVSQILPSLIQGAGLTLQIFFWTLIVSIPLGIIVSL----------GLTSKVKP 60

Query: 221 L---LYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           L   L I  +L+ G P L+ LI + Y L    P++G         V   + +  +A    
Sbjct: 61  LKWILEIYVWLMRGTPLLLQLIFVFYGL----PIIG--------IVFQRYDAALVAFILN 108

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R G  +V  GQ EAA  L L + +  R +++PQ ++ +IP + ++ +NL+K
Sbjct: 109 YAAYFAEIFRGGFQSVSVGQYEAAKVLRLNYWQTVRKIIIPQVVKIVIPSIGNEVINLVK 168

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SSL   +G  DL+  G    ++    I ++L+ + IYL L  +  L + ++  +
Sbjct: 169 DSSLVYVIGLGDLLRAGNVATSRDVTLIPLLLVGL-IYLILVGICTLVLRQVEKR 222


>gi|197284575|ref|YP_002150447.1| arginine transporter permease subunit ArtQ [Proteus mirabilis
           HI4320]
 gi|227356757|ref|ZP_03841142.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Proteus mirabilis ATCC 29906]
 gi|194682062|emb|CAR41587.1| arginine ABC transporter, permease protein [Proteus mirabilis
           HI4320]
 gi|227163047|gb|EEI47982.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Proteus mirabilis ATCC 29906]
          Length = 234

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 18/226 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALKY- 242
           T   + + + ++G+VL++  T     +     KA   L      LI GLP ++++   Y 
Sbjct: 13  TTVTLAISALIIGLVLAMLFT----AWESAKWKAFAFLGTCWVTLIRGLPEMLVVLFVYY 68

Query: 243 ------QLHFDKPVLG----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                  +  D   LG    QF+F  G T S  F    IALS   A++ ++ +R  L AV
Sbjct: 69  GTLQGVMMLMDGIELGPFTLQFDF--GDTESLPFYCGVIALSLLYASYASQTLRGALKAV 126

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EA  ALG+         ++PQ  R  +P L +Q+L LLK+++L   +   DL+  
Sbjct: 127 PTGQWEAGQALGMGKITIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQ 186

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +I N+T +      I   IYL+++++    +  L  +    E+ 
Sbjct: 187 TQSIANRTQEPFTWYSIVALIYLAITLVSQYILKWLEMRTTRFERS 232


>gi|331084133|ref|ZP_08333239.1| hypothetical protein HMPREF0992_02163 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330401988|gb|EGG81561.1| hypothetical protein HMPREF0992_02163 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 215

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 55/79 (69%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ A+PRGQ EAA  LG + ++    ++LPQ +++++P +T++ + L+K+
Sbjct: 98  AAYFAEIYRSGIEAIPRGQYEAAAILGYSGQQTFFRIILPQMIKNVLPAVTNEVITLVKD 157

Query: 338 SSLAVAVGFADLVSVGGTI 356
           +SL  ++ + ++ +V   I
Sbjct: 158 TSLVYSLSYVEMFAVAKQI 176


>gi|190891652|ref|YP_001978194.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696931|gb|ACE91016.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 375

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + +A++AE VRSGL AVPR Q  AA +LG++     R ++LPQA+R ++ PL   
Sbjct: 246 IGFTIFYSAYVAEYVRSGLQAVPRAQTAAARSLGISEFDINRSIVLPQALRVVVAPLVGN 305

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN--QTG-QAIEIILIWMFIYLSLSIMIALFMNR 387
            L++  ++ L   +G  D +  G  I+   Q G +  E++   +  Y  +  MI     +
Sbjct: 306 VLDIFNSAPLVFIIGLTDFLRAGQMILANPQYGDRTFEVLSFLLVTYFLVGSMITYAARK 365

Query: 388 LNAKIALKEK 397
           L   +A   +
Sbjct: 366 LEDHMATSAR 375


>gi|190404349|ref|YP_001960980.1| rcorf5 [Agrobacterium rhizogenes]
 gi|158322145|gb|ABW33562.1| rcorf5 [Agrobacterium rhizogenes]
          Length = 255

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 12/151 (7%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  P+L +  FLI FGLP L+ + +     F   +      I G+ V+  F     A S 
Sbjct: 67  RGTPIL-VQLFLIYFGLPYLIGVDI-----FPSTITTPAFSISGAIVAGIF-----AFSL 115

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + AA+++EI R+G+ +V +GQ EAA ALG+    A R ++LPQA+R I+P L +Q   + 
Sbjct: 116 HEAAYMSEITRAGIRSVEKGQSEAAQALGMLPSLAMRRIILPQALRIILPSLGNQCNMMF 175

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           K ++    +   +LV V  ++ +Q  +  E+
Sbjct: 176 KTTAFLSVIAVPELVHVADSLRSQNFKTFEV 206


>gi|331701267|ref|YP_004398226.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329128610|gb|AEB73163.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 214

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 25/182 (13%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           +F+    +  PLL    F+ +GLP + ++  +Y           F FI   T        
Sbjct: 53  NFYVWIMRGTPLLLQLIFVFYGLPIIHIVFQRYDA-------AMFAFILNYT-------- 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
                    A+  EI R G  +VP+GQ E+A  L L++ +  R +++PQ  + ++P + +
Sbjct: 98  ---------AYFGEIFRGGFQSVPKGQFESAKVLRLSYGQTIRKIVIPQVFKIVLPSIGN 148

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +NL+K+SSL   +G  DL+  G     +    + +IL+ + IYL+L+ +  + +  + 
Sbjct: 149 EVINLVKDSSLVYVIGLGDLLRAGNVATARDVTLLPLILVGI-IYLALTAVCTIVLKLIE 207

Query: 390 AK 391
            +
Sbjct: 208 KR 209


>gi|283955889|ref|ZP_06373379.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792549|gb|EFC31328.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 1336]
          Length = 233

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +
Sbjct: 10  APAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQL 69

Query: 146 FFLYKSV 152
           FFLY ++
Sbjct: 70  FFLYYAL 76


>gi|251781978|ref|YP_002996280.1| ABC transporter permease [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390607|dbj|BAH81066.1| ABC transporter permease protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 148

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV  GQ EA ++ G TH +   L++ PQA R ++P + SQ+
Sbjct: 20  AFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFTHFQVFCLIIFPQAFRKMLPAIISQF 79

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 80  VTVIKDTSLLYSV 92


>gi|116670305|ref|YP_831238.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116610414|gb|ABK03138.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Arthrobacter sp. FB24]
          Length = 232

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 71/127 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AE+VR  + +  +GQ EA IALG+      R +++PQ++ +++PP  + 
Sbjct: 89  LALGLNEGAYAAEVVRGAIASRAKGQTEACIALGMEPALRLRRIIIPQSIPAMLPPFGNV 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++LLKN+SL   V  ADL      I + TGQ   I +  + +Y +LS ++ L  + L  
Sbjct: 149 MVDLLKNTSLVSLVTVADLTFSAQMIRSTTGQTTAIFITILVMYFALSYLLTLLTSWLEK 208

Query: 391 KIALKEK 397
           + AL  K
Sbjct: 209 RFALDRK 215


>gi|319945076|ref|ZP_08019338.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319741646|gb|EFV94071.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 224

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 66/119 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S  TAA+  E +R+ +  +  GQ EAA +LG+  R   R +++PQA R+ +PPL + 
Sbjct: 93  IGFSLNTAAYTCETLRAAIAQIDAGQWEAAASLGMNRRHTLRRIIVPQAARTALPPLGNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ L+K++SLA  +   +L+     I  +T +   + +    IY +++ +++    RL 
Sbjct: 153 FIALVKDTSLAATIQVPELLRQSQLITARTFEVFAMYISAALIYWAIASILSALQARLE 211


>gi|227514609|ref|ZP_03944658.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087020|gb|EEI22332.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 223

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ---F 254
           I+ SL    L   +  K G    L  +   ++ G P L+++ L Y   +  P L +    
Sbjct: 26  ILASLLGVALGWLYLRKNGLLSGLARVYLGIVRGTPPLLMLLLSY---YGLPALLKGVGI 82

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N  G S ++   + L +  S Y    +AE  RS  +AV +GQ+EAA+A+G+T R+A   +
Sbjct: 83  NIDGWSKMTFGIIGLMVGWSAY----LAEAFRSAYLAVDQGQLEAALAVGITPRRAFFRI 138

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMF 372
           ++PQA    +P + + ++ L+K +SL   +G  D+ +    + NQT     ++I +I   
Sbjct: 139 IVPQAALIALPNIENLFIGLVKGTSLVYVLGLYDMYNEASNLSNQTNGIYQLQIFIILAL 198

Query: 373 IYLSLSIMI 381
           IY +  ++I
Sbjct: 199 IYWAFVLLI 207


>gi|116252666|ref|YP_768504.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257314|emb|CAK08409.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 220

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 30/176 (17%)

Query: 190 FVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           F  +FV G++LSL       A R     +    + +PLL +   L FGLP + ++     
Sbjct: 34  FALAFVFGLLLSLCQKSSFAALRYFAALYVTIMRGVPLLAVLFLLYFGLPGIGVV----- 88

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F+  G +          +AL C+ AA +AE+ R+GL A+P GQ EAA+A 
Sbjct: 89  ----------FDAFGAAIAG-------LAL-CF-AAQVAELFRAGLKAIPAGQSEAALAA 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           G T  ++   ++LPQ  R I+ P+   +++LLK+SSLA  +   +LV  G ++  +
Sbjct: 130 GFTPAQSFVWIILPQVARVILAPMIITFVSLLKDSSLASLITVDELVLTGRSMATE 185


>gi|157414760|ref|YP_001482016.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385724|gb|ABV52039.1| polar amino acid transport system permease protein [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|315931092|gb|EFV10066.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 233

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +
Sbjct: 10  APAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQL 69

Query: 146 FFLYKSV 152
           FFLY ++
Sbjct: 70  FFLYYAL 76


>gi|89901104|ref|YP_523575.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89345841|gb|ABD70044.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 367

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 56/89 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++ + AA+ AE++R GL A+P+GQ+EAA  LGL++ +  R ++LPQA+  ++P + + 
Sbjct: 236 VGITLFAAAYSAEVIRGGLQAIPKGQVEAAATLGLSYWQTQRKIVLPQALAMVVPGIMNN 295

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +++  K++SL   V   +L       +N 
Sbjct: 296 FISTFKDTSLVTIVSLYELTGAMSLALNS 324


>gi|88596920|ref|ZP_01100156.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562122|ref|YP_002343901.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|88190609|gb|EAQ94582.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359828|emb|CAL34615.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284925734|gb|ADC28086.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|315928204|gb|EFV07521.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929759|gb|EFV08929.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 233

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 82  DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D  +  A    F+   WL    +F G+I + IIG           K++  IC++Y+E  R
Sbjct: 2   DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61

Query: 138 NIPPLVVIFFLYKSV 152
           N P L+ +FFLY ++
Sbjct: 62  NTPLLIQLFFLYYAL 76


>gi|319899108|ref|YP_004159201.1| Glutamate/aspartate transport system permease protein gltK
           [Bartonella clarridgeiae 73]
 gi|319403072|emb|CBI76627.1| Glutamate/aspartate transport system permease protein gltK
           [Bartonella clarridgeiae 73]
          Length = 178

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 60/90 (66%), Gaps = 1/90 (1%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           FI G+++     S  I  + + AA+ AEI+R+G++++ +GQ +A  ALG+T+ +  R+V+
Sbjct: 39  FITGTSIGAN-KSALITFTAFEAAYFAEIMRAGILSISQGQKQAGQALGMTYWQNMRIVI 97

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           LPQA R+++P   +Q + L ++++L  A+ 
Sbjct: 98  LPQAFRNMLPVFLTQIIILFQDTTLVYAIS 127


>gi|297198908|ref|ZP_06916305.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|197711171|gb|EDY55205.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 296

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 22/182 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+     ++ G+P     AL+ Q     PVL     +GG+           AL+  
Sbjct: 133 RGLPLIINLMIVVLGVP-----ALRLQGVTVDPVL-----LGGT-----------ALTLT 171

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+ R+G+ +V   Q  AA +LGL++R+A R V+LPQA+R  +PPL +  ++L K
Sbjct: 172 YSAYVAEVFRAGIESVHPSQRAAARSLGLSNRQALRYVVLPQAVRRQVPPLLNDLVSLQK 231

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++ L    G  D V     I+ ++      I+  + ++++L+I +  F + + A++  + 
Sbjct: 232 DTGLVSIGGAIDAVRAADIIVGRSLNYTPYIVAGL-VFVALTIPMTRFTDWVTARMDRRR 290

Query: 397 KK 398
            +
Sbjct: 291 AQ 292


>gi|24114552|ref|NP_709062.1| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|24053745|gb|AAN44769.1| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
          Length = 163

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 62/116 (53%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W   N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 31  QILAVVAVVGIVGWLFQNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 90

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNI  L+++
Sbjct: 91  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIANLLLV 146


>gi|328956045|ref|YP_004373378.1| amino acid ABC transporter membrane protein, PAAT family
           [Coriobacterium glomerans PW2]
 gi|328456369|gb|AEB07563.1| amino acid ABC transporter membrane protein, PAAT family
           [Coriobacterium glomerans PW2]
          Length = 421

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 70/117 (59%), Gaps = 1/117 (0%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++ EI R+G+ ++  GQ EAA +LG+T  +    V++PQ  R++IP LT++++ L K
Sbjct: 283 SGAYLCEIFRAGIASIDIGQGEAARSLGMTRSQTMVDVIVPQMFRAVIPNLTNEFILLYK 342

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++SL  AVG  +LV    TI+  TG     I+   F YL +++ ++     L  +++
Sbjct: 343 DTSLLAAVGTMELVMYAKTIVANTGSITPYIVAAAF-YLVITLPLSKITRHLERRVS 398


>gi|315639957|ref|ZP_07895087.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484282|gb|EFU74748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 223

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 31/220 (14%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVL 237
           PT  M +   +F F+ ++G+V++L    L R   E  G      LYIS F   G+PTLV 
Sbjct: 20  PTTLMLSIISMF-FAVIIGLVIAL----LKRS--EIPGLTQFATLYISLFR--GMPTLVQ 70

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY------IALSCYTAAFIAEIVRSGLIA 291
           + + Y               G   + PE  +L       I  S   ++++AEI R+ L +
Sbjct: 71  LFIIYY--------------GLPQIFPEMSNLQASQAAIIGFSLKESSYLAEIFRAALGS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEA +A+G+   K    ++LPQA  + +P   + +++L+K SSLA  +G  +L +
Sbjct: 117 VDKGQMEAGLAVGMKKVKIYTRIILPQAAVNALPATGNTFISLIKESSLAFTLGITELFA 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  +   + +  E  L+   +Y  L I+I  F  RL  K
Sbjct: 177 EGKMLAAASLRFFETYLVVGLVYWGL-IIIYSFFQRLVEK 215


>gi|257056915|ref|YP_003134747.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586787|gb|ACU97920.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 219

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 74/134 (55%), Gaps = 1/134 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+SP    + + L  + A + A++ R+G+ AVP+GQ EA++AL L      R V+LPQ
Sbjct: 83  GITLSPMVAGV-LGLGVHYACYCADVYRAGIEAVPKGQWEASLALQLPAHITWRRVVLPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+++P L +  + + K +     +   +L+    TI   T + +E + +   I+L+ S
Sbjct: 142 AVRNVLPALGNYAIAMFKETPFLALITVPELLRTARTIGGDTYEYLEPLTLAGLIFLAAS 201

Query: 379 IMIALFMNRLNAKI 392
              AL + +L  ++
Sbjct: 202 YPTALLLRKLENRM 215


>gi|260587478|ref|ZP_05853391.1| polar amino acid uptake family ABC transporter, permease protein
           [Blautia hansenii DSM 20583]
 gi|260541743|gb|EEX22312.1| polar amino acid uptake family ABC transporter, permease protein
           [Blautia hansenii DSM 20583]
          Length = 215

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 55/79 (69%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ A+PRGQ EAA  LG + ++    ++LPQ +++++P +T++ + L+K+
Sbjct: 98  AAYFAEIYRSGIEAIPRGQYEAAAILGYSGQQTFFRIILPQMIKNVLPTVTNEVITLVKD 157

Query: 338 SSLAVAVGFADLVSVGGTI 356
           +SL  ++ + ++ +V   I
Sbjct: 158 TSLVYSLSYVEMFAVAKQI 176


>gi|242309233|ref|ZP_04808388.1| polar amino acid ABC transporter [Helicobacter pullorum MIT
           98-5489]
 gi|239524274|gb|EEQ64140.1| polar amino acid ABC transporter [Helicobacter pullorum MIT
           98-5489]
          Length = 217

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 5/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S +  A + ++VR  + ++PR Q E+  ALGL+  +    ++LPQ+ R ++PPL + 
Sbjct: 90  LVFSLWGIAEMGDLVRGAISSLPRHQSESGRALGLSEMQIQIFIILPQSFRRLLPPLVNL 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFM 385
           +  ++K +SLA  +G +D++ VG  II     +      W++     +Y  L   ++LF 
Sbjct: 150 FTRMIKTTSLAALIGVSDMLKVGQQIIEVNLISYPQASFWVYGGIFALYFMLCYPLSLFS 209

Query: 386 NRLNAKIA 393
             L  K+A
Sbjct: 210 QHLERKLA 217



 Score = 39.7 bits (91), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 37/68 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D+     +L G + TF +AF  +  + I G ++G      NK++ +ICR Y+E  R IP 
Sbjct: 6   DTQNIVRLLQGVLVTFQIAFIAIFFSCIFGFVLGYLMTLPNKILNFICRFYLETIRIIPI 65

Query: 142 LVVIFFLY 149
           L  +F +Y
Sbjct: 66  LAWLFIVY 73


>gi|163759019|ref|ZP_02166105.1| ABC amino acid transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
 gi|162283423|gb|EDQ33708.1| ABC amino acid transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
          Length = 225

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 26/170 (15%)

Query: 209 RHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RHF   + +  +  PL+    F  FGLP LV  A  +  H                    
Sbjct: 55  RHFATAYVEVIRNTPLIVQLFFFAFGLPLLVGYAWPFWAH-------------------- 94

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                +AL+   + + +EI+R+G  AVP GQ+EAA+ALG+      R V+ PQA+ ++  
Sbjct: 95  ---ALLALTINFSGYFSEILRAGYAAVPAGQVEAAMALGVKKLTLFRKVIFPQAVAAMYS 151

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            L SQ++ L   + +   +G  DL S G  I ++T ++ E+ +    IY+
Sbjct: 152 SLNSQFIFLFLTTGVIAEIGVTDLTSAGLFIDSRTFRSFEVFITLTVIYI 201


>gi|126730763|ref|ZP_01746573.1| ABC-type amino acid transport system, permease component [Sagittula
           stellata E-37]
 gi|126708929|gb|EBA07985.1| ABC-type amino acid transport system, permease component [Sagittula
           stellata E-37]
          Length = 221

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 65/121 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     ++ +E+VR  +++VPR Q E A+AL L+  ++ R V+LPQA+ S+IPP+ + 
Sbjct: 89  IVLGLNVGSYGSEVVRGAILSVPRDQTEGAVALNLSRFQSMRYVILPQALVSMIPPMGNL 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++LLK + L   +  ADL      +  QT   I I    + +Y  LS  +A    +  A
Sbjct: 149 AIDLLKITPLVSLITIADLTFQAQVVRQQTNDTILIYGFVLVVYFILSSAVAHVFTKAGA 208

Query: 391 K 391
            
Sbjct: 209 H 209


>gi|282854428|ref|ZP_06263765.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|282583881|gb|EFB89261.1| conserved hypothetical protein [Propionibacterium acnes J139]
          Length = 216

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 7/170 (4%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           H H  +    P  Y   F  +GL  ++   L  ++ F  P   QF  I    V     + 
Sbjct: 4   HGHTSSCSEKPR-YTPVF--WGLLAVLYPTLPIEVPFGGP---QFASIETEQVVTTLATT 57

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I L     A++ EI RSGL +V  GQ EAA  LG+      R V++PQ MR II PL +
Sbjct: 58  IIGLDLNENAYLTEITRSGLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGN 117

Query: 330 QYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + + +LK +SL +AV F  DL      + N+    I ++++  F YL ++
Sbjct: 118 ETIGMLKTTSLVLAVPFTLDLQYATSAMANRIYAPIPLLVVTAFWYLVMT 167


>gi|297587192|ref|ZP_06945837.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Finegoldia magna ATCC 53516]
 gi|297575173|gb|EFH93892.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Finegoldia magna ATCC 53516]
          Length = 526

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P   +L+I +S  T A+++E+VR G+ +V  GQMEA  ALG+TH ++   V+LPQ
Sbjct: 376 GIDMAPISAALFI-VSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHGQSMINVILPQ 434

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+++I+P + ++++  +K++S+   +   +L  V  +I   T    E   +   IY  L+
Sbjct: 435 AIKNILPSIGNEFVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLT 494


>gi|256391966|ref|YP_003113530.1| polar amino acid ABC transporter inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
 gi|256358192|gb|ACU71689.1| polar amino acid ABC transporter, inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
          Length = 258

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 71/118 (60%), Gaps = 8/118 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+PTL+LI +   + F  P L     + G+   P  + + +AL+    A+++E+ R+GL 
Sbjct: 96  GVPTLLLILV---VGFGIPALQ----LSGTPKDPVVLGV-VALTLSYVAYVSEVFRAGLD 147

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +V   Q  AA ALGL+ R+  R V+LPQA+R+++PPL + +  L K+++L   +G  +
Sbjct: 148 SVHPSQRAAATALGLSERQTLRFVVLPQAIRNVVPPLLNDFSALQKDTALVSTLGVVE 205


>gi|256380866|ref|YP_003104526.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255925169|gb|ACU40680.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 286

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 77/144 (53%), Gaps = 10/144 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL   Y+  F   GLP ++L+   Y + F  P L     +GG    P  +   IAL   
Sbjct: 115 RALATGYVDLFR--GLPLIILL---YLVGFGLPAL----RLGGVPTDPVVLG-GIALVLT 164

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+ R+G+ ++   Q+ AA +LGL HR+  RLV+LPQA+R + P L + ++ L K
Sbjct: 165 YSAYVAEVFRAGIESIHPSQIAAARSLGLDHRRTLRLVVLPQAVRRVTPALLNDFVALQK 224

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +  L   +G  D V     +  +T
Sbjct: 225 DCGLISVLGAVDAVRAAQIVQAKT 248


>gi|227543804|ref|ZP_03973853.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus reuteri CF48-3A]
 gi|300908873|ref|ZP_07126336.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|68160832|gb|AAY86862.1| lr1198 [Lactobacillus reuteri]
 gi|227186181|gb|EEI66252.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus reuteri CF48-3A]
 gi|300894280|gb|EFK87638.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 487

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 23/181 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247
           +F+ + G++L +     ++  +           +S+ LI+   G+P +VL    Y     
Sbjct: 302 IFAMIFGVILGVLGIAQNKFANA----------VSSTLIYIFRGIPMIVLAFFIY----- 346

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +G  N IG     P F++  + L+    A+I  IV+ G  +V  GQ EAA +LGL +
Sbjct: 347 ---MGIPNVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQWEAARSLGLPY 401

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  +L   G  II+Q  +  ++ 
Sbjct: 402 SKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNMEGFKMW 461

Query: 368 L 368
           L
Sbjct: 462 L 462



 Score = 37.4 bits (85), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 20/124 (16%)

Query: 51  NME-KSNLSLGIGFLSERAGFEIDQGIVPYT-SDSSYAT----------------AILVG 92
           N+E +  ++ GI +L +    ++DQ I  YT SD +                   A+L G
Sbjct: 232 NLELQKKMNDGIKWLKDTG--QMDQIIDKYTKSDKTTKDSATDRTILGLIRANYPALLRG 289

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L   G+I A I G ++G   ++ NK    +    + +FR IP +V+ FF+Y  +
Sbjct: 290 LWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFFIYMGI 349

Query: 153 LSVL 156
            +V+
Sbjct: 350 PNVI 353


>gi|322411895|gb|EFY02803.1| Amino acid ABC transporter, permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 213

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +  R ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|283832471|ref|ZP_06352212.1| arginine ABC transporter, permease protein ArtQ [Citrobacter
           youngae ATCC 29220]
 gi|291072130|gb|EFE10239.1| arginine ABC transporter, permease protein ArtQ [Citrobacter
           youngae ATCC 29220]
          Length = 238

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L +A  + ++    D PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLADGFTINLGFVDIPVQMQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYAAYASQTLRGALKAVPLGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|264678002|ref|YP_003277909.1| amino acid ABC transporter permease PEB1 [Comamonas testosteroni
           CNB-2]
 gi|262208515|gb|ACY32613.1| amino acid ABC transporter, permease protein PEB1 [Comamonas
           testosteroni CNB-2]
          Length = 266

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 2/123 (1%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L I LS  TAA +AE+ R+G++AVPRGQ +AA +LGLT  +    V+ PQA+R I+P 
Sbjct: 142 LTLPIGLS--TAAVVAEVYRAGVLAVPRGQTDAARSLGLTEVQVFFFVVFPQALRYIVPA 199

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q + ++K+++    V + +L+     +I      + + L+   +Y  ++  I+    
Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQNAKVLIANYHSLVPVYLVVAALYCLVNYAISKASQ 259

Query: 387 RLN 389
           RL 
Sbjct: 260 RLG 262


>gi|291296961|ref|YP_003508359.1| polar amino acid ABC transporter inner membrane subunit
           [Meiothermus ruber DSM 1279]
 gi|290471920|gb|ADD29339.1| polar amino acid ABC transporter, inner membrane subunit
           [Meiothermus ruber DSM 1279]
          Length = 367

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 17/161 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFD 247
           VFS + G+V+++     ++    K  +  P+ +I+TF       LP++++I   Y + F 
Sbjct: 170 VFSLIWGLVVAI-----AKLLPGKPAQ--PIRFIATFYTDAFLSLPSIIVI---YLIGFG 219

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+ G    IG     P      +AL+    A++AE+ R+GL ++   Q  AA +LGL++
Sbjct: 220 LPLTG----IGFFRNLPLEALAVLALTLTYGAYMAEVYRAGLESIHPSQWAAARSLGLSY 275

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
            +  R V++PQA+R IIPPL + ++ + K+++L   VG  D
Sbjct: 276 GQTLRFVVVPQAVRRIIPPLLNNFIGMQKDTALVNVVGVID 316


>gi|225574974|ref|ZP_03783584.1| hypothetical protein RUMHYD_03053 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037821|gb|EEG48067.1| hypothetical protein RUMHYD_03053 [Blautia hydrogenotrophica DSM
           10507]
          Length = 220

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 82/143 (57%), Gaps = 2/143 (1%)

Query: 252 GQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G + F G S T     +++ I  S   AA+ AEI R G+ ++P GQ EAA  LG    + 
Sbjct: 76  GPYFFFGISITQGYSMIAVLIGFSLNYAAYFAEIYRGGIESMPVGQYEAAQILGYKKSQT 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQ ++ I+P +T++ + L+K++SLA  +  A++ ++   I +     +  ++  
Sbjct: 136 FVHIILPQVIKRILPAVTNEVITLVKDTSLAFVLAVAEMFTIAKQIASSQTTMMPFVIAA 195

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
           +F Y+  ++++A+ M+++  +++
Sbjct: 196 VFYYV-FNLLVAVVMDKIEKRLS 217


>gi|168487564|ref|ZP_02712072.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1087-00]
 gi|183569640|gb|EDT90168.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1087-00]
          Length = 213

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 20/161 (12%)

Query: 228 LIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGGSTVS-----PEFM 267
           L+F +P  VLIA   Q+H+                 P+L Q  FI     S         
Sbjct: 26  LLFSIPLGVLIAFTLQVHWKPLHYLINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLP 85

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  IA     AA+ AEI R G+  +PRGQ EAA  L  +     R ++LPQ  + ++P +
Sbjct: 86  AAIIAFVLNYAAYFAEIFRGGIDTIPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSV 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            ++ ++L+K++SL  A+G +DL+    T  N+    + + L
Sbjct: 146 FNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 186


>gi|160933930|ref|ZP_02081317.1| hypothetical protein CLOLEP_02792 [Clostridium leptum DSM 753]
 gi|156866603|gb|EDO59975.1| hypothetical protein CLOLEP_02792 [Clostridium leptum DSM 753]
          Length = 213

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 53/82 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ ++P GQ EAA  LG   ++    ++LPQ ++ IIPP+ ++
Sbjct: 89  VAFALNYAAYFAEIYRGGIESIPDGQYEAAKVLGFNKKQTFFRIILPQVVKRIIPPMGNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L+K++SLA  +   +L+ V
Sbjct: 149 FITLVKDTSLAQVIAVVELLKV 170



 Score = 37.0 bits (84), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 37/63 (58%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T +L G + T  + FS ++ A  +G LV  GR+S  K++ W  R+++ + R  P ++ + 
Sbjct: 8   TEMLQGTLMTLRIFFSTLVFALPLGLLVSLGRMSKIKIINWPVRLFILIMRGTPLMLQLL 67

Query: 147 FLY 149
           F++
Sbjct: 68  FVF 70


>gi|94987161|ref|YP_595094.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731410|emb|CAJ54773.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 228

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 70/129 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +++  I  +  T A+ +E +R  L+++ +GQ++AA ALG T  KA   +++PQA R  +P
Sbjct: 89  YIAAVIGFTLCTGAYQSEYIRGALLSIKKGQLQAAYALGFTRLKAILFIIIPQATRYALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++ + L+K SSLA  +   +L      +++QT + +EI  I    YLS   +    +
Sbjct: 149 GCGNELVYLIKYSSLAYLITCIELTGEAKILVSQTVKPMEIYFIAAIYYLSFVSIATWIL 208

Query: 386 NRLNAKIAL 394
            +L    A+
Sbjct: 209 KKLETLYAI 217


>gi|329942893|ref|ZP_08291672.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Chlamydophila psittaci Cal10]
 gi|313848065|emb|CBY17063.1| ABC transporter, membrane permease [Chlamydophila psittaci RD1]
 gi|325507119|gb|ADZ18757.1| amino ABC transporter, permease protein [Chlamydophila psittaci
           6BC]
 gi|328815153|gb|EGF85142.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Chlamydophila psittaci Cal10]
 gi|328914734|gb|AEB55567.1| amino acid ABC transporter, permease protein [Chlamydophila
           psittaci 6BC]
          Length = 215

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 15/183 (8%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +  T  SR+F  +  + L  LY++  +I G P  + I + Y   F  P + + +      
Sbjct: 35  IIGTMTSRYFPCRITRWLGNLYVT--VIRGTPLFIQILIFY---FGLPSIIRLD------ 83

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                M+  IALS  ++A++AE +R G+ A+  GQ E+A  LG    +    ++ PQ  +
Sbjct: 84  -PTPLMAGLIALSINSSAYLAENIRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFK 142

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +I+P LT++++ L+K SS+ + VG  +L  V   I+++    +E+  I   +YL   +M 
Sbjct: 143 NILPSLTNEFVALIKESSILMVVGVPELTKVSKDIVSRELNPMEMYSICAALYL---LMT 199

Query: 382 ALF 384
           +LF
Sbjct: 200 SLF 202


>gi|295398059|ref|ZP_06808114.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294973708|gb|EFG49480.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 247

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 72/129 (55%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           +YI     TAAF +EI RS + +V   Q EAA ++GLT  +  R ++LPQA+R  IP   
Sbjct: 96  VYITYGLNTAAFFSEIFRSAISSVATDQKEAAASVGLTKLQTYRRIILPQAVRIAIPATG 155

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  ++LL+++SLA ++G  D++     +   T +++E   +   I++ LSI++      L
Sbjct: 156 TMIVSLLQDTSLAFSLGVIDVIGKVRALAALTYRSLEGYFVAAIIFIVLSIVLERVFAWL 215

Query: 389 NAKIALKEK 397
             +   + K
Sbjct: 216 TKRFQFQSK 224


>gi|312196903|ref|YP_004016964.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311228239|gb|ADP81094.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 317

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 21/134 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP++     + FGLP     AL+ Q     PV+     +GG           IAL+  
Sbjct: 154 RGLPVILGLYLVGFGLP-----ALRLQGTPRDPVV-----LGG-----------IALTLT 192

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AE++R+G+ +V   Q+ AA +LGL++ K  R V+LPQA+R ++PPL +  ++L K
Sbjct: 193 YTAYVAEVIRAGIESVHPSQVAAARSLGLSYAKTMRFVVLPQALRRVVPPLLNDAISLQK 252

Query: 337 NSSLAVAVGFADLV 350
           +S L   +G  D V
Sbjct: 253 DSGLVSVLGVVDAV 266


>gi|297567185|ref|YP_003686157.1| polar amino acid ABC transporter inner membrane subunit
           [Meiothermus silvanus DSM 9946]
 gi|296851634|gb|ADH64649.1| polar amino acid ABC transporter, inner membrane subunit
           [Meiothermus silvanus DSM 9946]
          Length = 364

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 23/164 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLV---LIALKYQL 244
           VF  V G+V+++     +R    + G  +  L   Y   F   GLPT++   LIAL   L
Sbjct: 169 VFILVWGLVIAV-----ARMVPGRAGSPIRFLATVYTDAFR--GLPTIISIYLIALGLPL 221

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P++  +         PE++++ +AL+    A++AE+ R+GL ++   Q  AA +LG
Sbjct: 222 A-NVPLVRDW--------PPEWLAV-LALTVSYGAYVAEVYRAGLDSIHPSQWAAARSLG 271

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L+  +  R V++PQA+R IIPPL + ++ L K+++L   VG  D
Sbjct: 272 LSFSQTLRFVIIPQAVRRIIPPLLNDFIALQKDTALVNVVGVID 315


>gi|256847114|ref|ZP_05552560.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256715778|gb|EEU30753.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 225

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 27/180 (15%)

Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           LY+  F I  +PT+VL+ L Y     Q   D P                +M++ +A + +
Sbjct: 60  LYLEFFRI--VPTIVLLFLVYYILPRQFKIDLPA--------------TWMAV-LAFALW 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA  ++IVR  L +VP+ Q E+ +ALGL+  +  R VLLPQA +  +P   +    ++K
Sbjct: 103 VAAEFSDIVRGALESVPKHQRESGLALGLSSCQLFRYVLLPQAFQLELPVTINLATRVIK 162

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391
            +SL + +   D+++VG  II    Q     + W++     +Y  +   ++L+  RL AK
Sbjct: 163 TTSLLMTISIMDVINVGQQIIEANNQTHPTGVFWVYGLIFILYFVVDYPLSLWAKRLTAK 222


>gi|170702188|ref|ZP_02893094.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170132897|gb|EDT01319.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 241

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 94  PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q++ L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|15901349|ref|NP_345953.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|111657054|ref|ZP_01407850.1| hypothetical protein SpneT_02001719 [Streptococcus pneumoniae
           TIGR4]
 gi|116516529|ref|YP_816792.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|148984846|ref|ZP_01818099.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148988547|ref|ZP_01819980.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|148992613|ref|ZP_01822281.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|148997437|ref|ZP_01825042.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149003284|ref|ZP_01828180.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|149008125|ref|ZP_01831656.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|149011737|ref|ZP_01832933.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|149021769|ref|ZP_01835776.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483888|ref|ZP_02708840.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1873-00]
 gi|168489663|ref|ZP_02713862.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP195]
 gi|168492572|ref|ZP_02716715.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC0288-04]
 gi|168493402|ref|ZP_02717545.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC3059-06]
 gi|168575958|ref|ZP_02721873.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|169832498|ref|YP_001694909.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|194398715|ref|YP_002038132.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|221232215|ref|YP_002511368.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854945|ref|YP_002736457.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|225857128|ref|YP_002738639.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae P1031]
 gi|225859260|ref|YP_002740770.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 70585]
 gi|225861336|ref|YP_002742845.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|237649208|ref|ZP_04523460.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CCRI 1974]
 gi|237821817|ref|ZP_04597662.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|298230582|ref|ZP_06964263.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255877|ref|ZP_06979463.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298503238|ref|YP_003725178.1| amino acid ABC superfamily transporter permease [Streptococcus
           pneumoniae TCH8431/19A]
 gi|303254159|ref|ZP_07340272.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|303260725|ref|ZP_07346685.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303263052|ref|ZP_07348984.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264456|ref|ZP_07350376.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303267434|ref|ZP_07353288.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303269791|ref|ZP_07355540.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|307068147|ref|YP_003877113.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|307126931|ref|YP_003878962.1| amino acid ABC transporter permeae [Streptococcus pneumoniae
           670-6B]
 gi|14972991|gb|AAK75593.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|116077105|gb|ABJ54825.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|147756492|gb|EDK63533.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147758744|gb|EDK65741.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147760431|gb|EDK67409.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147764168|gb|EDK71100.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147922868|gb|EDK73984.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147925748|gb|EDK76823.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147928630|gb|EDK79644.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|147930005|gb|EDK80992.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168995000|gb|ACA35612.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172042766|gb|EDT50812.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1873-00]
 gi|183571981|gb|EDT92509.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP195]
 gi|183573305|gb|EDT93833.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC0288-04]
 gi|183576655|gb|EDT97183.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC3059-06]
 gi|183578303|gb|EDT98831.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|194358382|gb|ACF56830.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
 gi|220674676|emb|CAR69249.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225720386|gb|ACO16240.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 70585]
 gi|225723987|gb|ACO19840.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|225726193|gb|ACO22045.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae P1031]
 gi|225727461|gb|ACO23312.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238833|gb|ADI69964.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Streptococcus pneumoniae TCH8431/19A]
 gi|301794515|emb|CBW36957.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae INV104]
 gi|301800339|emb|CBW32968.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae OXC141]
 gi|301802223|emb|CBW34973.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae INV200]
 gi|302598885|gb|EFL65918.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|302635815|gb|EFL66318.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638128|gb|EFL68603.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302640684|gb|EFL71082.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302643025|gb|EFL73318.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646268|gb|EFL76495.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|306409684|gb|ADM85111.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|306483993|gb|ADM90862.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 670-6B]
 gi|327389686|gb|EGE88031.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
 gi|332072294|gb|EGI82777.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332073837|gb|EGI84315.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
 gi|332074251|gb|EGI84728.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 213

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 20/161 (12%)

Query: 228 LIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGGSTVS-----PEFM 267
           L+F +P  VLIA   Q+H+                 P+L Q  FI     S         
Sbjct: 26  LLFSIPLGVLIAFALQVHWKPLHYLINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLP 85

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  IA     AA+ AEI R G+  +PRGQ EAA  L  +     R ++LPQ  + ++P +
Sbjct: 86  AAIIAFVLNYAAYFAEIFRGGIDTIPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSV 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            ++ ++L+K++SL  A+G +DL+    T  N+    + + L
Sbjct: 146 FNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 186


>gi|313648491|gb|EFS12933.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella flexneri 2a str. 2457T]
          Length = 157

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 62/116 (53%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W   N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFQNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNI  L+++
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIANLLLV 140


>gi|148543337|ref|YP_001270707.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184152747|ref|YP_001841088.1| glutamine ABC transporter substrate binding and permease components
           [Lactobacillus reuteri JCM 1112]
 gi|227364409|ref|ZP_03848499.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325683609|ref|ZP_08163125.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530371|gb|ABQ82370.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus reuteri DSM 20016]
 gi|183224091|dbj|BAG24608.1| glutamine ABC transporter substrate binding and permease components
           [Lactobacillus reuteri JCM 1112]
 gi|227070502|gb|EEI08835.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324977959|gb|EGC14910.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 487

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 23/181 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247
           +F+ + G++L +     ++  +           +S+ LI+   G+P +VL    Y     
Sbjct: 302 IFAMIFGVILGVLGIAQNKFANA----------VSSTLIYIFRGIPMIVLAFFIY----- 346

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +G  N IG     P F++  + L+    A+I  IV+ G  +V  GQ EAA +LGL +
Sbjct: 347 ---MGIPNVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQWEAARSLGLPY 401

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  +L   G  II+Q  +  ++ 
Sbjct: 402 SKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNMEGFKMW 461

Query: 368 L 368
           L
Sbjct: 462 L 462



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 20/125 (16%)

Query: 50  NNME-KSNLSLGIGFLSERAGFEIDQGIVPYT-SDSSYAT----------------AILV 91
            N+E +  ++ GI +L +    ++DQ I  YT SD +                   A+L 
Sbjct: 231 KNLELQKKMNDGIKWLKDTG--QMDQIIDKYTKSDKTTKGSATDRTILGLIRANYPALLR 288

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L   G+I A I G ++G   ++ NK    +    + +FR IP +V+ FF+Y  
Sbjct: 289 GLWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFFIYMG 348

Query: 152 VLSVL 156
           + +V+
Sbjct: 349 IPNVI 353


>gi|327461006|gb|EGF07339.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 219

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDSGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|319794876|ref|YP_004156516.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315597339|gb|ADU38405.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 220

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 7/155 (4%)

Query: 243 QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +L  + P + Q  FI       G  +SPE  S+ IA+     A+  EI+R+G+ A P+GQ
Sbjct: 62  ELIRNTPFIVQLFFIFFGLPAAGVKLSPEVASV-IAMVMNLGAYSTEIIRAGIEATPKGQ 120

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA++L L+  +    V+LP A++ + P + SQ + ++  S++   +   +L      I
Sbjct: 121 IEAAVSLALSKSQVFLRVVLPPALKKVWPSMVSQIIIVMLGSAVCGQISTEELSYAANLI 180

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++  +A E  +I   IYL+LS+ +   +N    K
Sbjct: 181 QSRNFRAFEAFIIATLIYLALSVALRRLLNWAGPK 215


>gi|295835694|ref|ZP_06822627.1| glutamate permease [Streptomyces sp. SPB74]
 gi|197698112|gb|EDY45045.1| glutamate permease [Streptomyces sp. SPB74]
          Length = 298

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 1/131 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L   L+ Y  + +AE+ RSG+ +V RGQ EAA ALG+   +    +L+PQA+R+++P +
Sbjct: 143 ALVTGLTLYNGSVLAEVFRSGIASVDRGQREAAYALGMRKTQVMAYILIPQAVRAMLPSI 202

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            SQ +  LK++SL   + + + +  G  I +     +  I + M I   L I + + ++ 
Sbjct: 203 ISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVI-APLYIGMCMVLSW 261

Query: 388 LNAKIALKEKK 398
           L   +A +E++
Sbjct: 262 LAHLLARRERR 272



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
            GRLS ++ V W     VE FR +P LV+IFF++ + L V P+P
Sbjct: 100 VGRLSEHRPVRWPATALVEFFRAMPVLVMIFFVFIA-LKVQPLP 142


>gi|197295418|ref|YP_002153959.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944897|emb|CAR57506.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 216

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 70/128 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++    L+ +T+A++AEI R  + AVP+GQ EA+ +L +++ +  R V+LPQA R  
Sbjct: 84  PPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           I P     +  +K+++L   +GF +L  VG  I N T +   +  +   IY +L   +  
Sbjct: 144 IAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTR 203

Query: 384 FMNRLNAK 391
           +   L  +
Sbjct: 204 YARTLQRR 211


>gi|187780000|ref|ZP_02996473.1| hypothetical protein CLOSPO_03596 [Clostridium sporogenes ATCC
           15579]
 gi|187773625|gb|EDU37427.1| hypothetical protein CLOSPO_03596 [Clostridium sporogenes ATCC
           15579]
          Length = 215

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 65/113 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS    A+ AEI+R G+I+V +GQ EA  ALG  +    + ++LPQ  + IIP
Sbjct: 86  FSAAILGLSLNAGAYTAEIIRGGIISVDKGQFEACRALGFNYFHTMKKIVLPQTFKIIIP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            L ++++ +LK++SL   +   +++     + + T + +E  ++   +YL ++
Sbjct: 146 SLGNEFITMLKDTSLVSTIAMVEVMRSAQLLYSSTFKPMETFILTAVLYLIMT 198


>gi|68535731|ref|YP_250436.1| glutamate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|260578184|ref|ZP_05846104.1| glutamate transport system permease protein GluC [Corynebacterium
           jeikeium ATCC 43734]
 gi|68263330|emb|CAI36818.1| glutamate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|258603723|gb|EEW16980.1| glutamate transport system permease protein GluC [Corynebacterium
           jeikeium ATCC 43734]
          Length = 228

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 51/78 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A   YT+ F+AE +RSG+  VP GQ EAA +LGL+  +  R V+ PQA+R  I PL + 
Sbjct: 102 LAFVAYTSCFVAESLRSGINTVPFGQAEAARSLGLSFGQNFRHVIFPQALRGAIVPLGNT 161

Query: 331 YLNLLKNSSLAVAVGFAD 348
            + L KN+++A  +G A+
Sbjct: 162 LIALTKNTTIASVIGVAE 179


>gi|296110805|ref|YP_003621186.1| amino acid ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832336|gb|ADG40217.1| amino acid ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 237

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 68/126 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  S    A+ +E VR+ L +VP+ Q EAA  LGL+ R+    ++ PQA+R  +P
Sbjct: 96  FPAAVITFSLNVGAYASETVRAALDSVPQAQWEAAATLGLSRRQTIFEIIFPQAIRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL+++++ L+K++SLA  +   ++ ++   I  +  Q + +  I   IY   S ++    
Sbjct: 156 PLSNEFIGLVKDTSLASTITIVEMFAITQQITAKNYQPLLMYSIVAVIYAFFSTILVFLQ 215

Query: 386 NRLNAK 391
             L  +
Sbjct: 216 KYLEKR 221


>gi|224282756|ref|ZP_03646078.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313139916|ref|ZP_07802109.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313132426|gb|EFR50043.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 362

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F G S  SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   
Sbjct: 134 FAFAGLS--SPSYWAVVLALVLYNGSVVAELVRSGVGNLPNGQREASLALGLTETQSLMQ 191

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +PQA+ +++P   +Q + +LK+++L   + + DL+ 
Sbjct: 192 IEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|221197901|ref|ZP_03570947.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221204541|ref|ZP_03577558.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221175398|gb|EEE07828.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221181833|gb|EEE14234.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 250

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 12/143 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL L +I  F    +P L+LI   +  +F  P+L         T  P   S+  AL+  
Sbjct: 59  RALLLAFIGFFR--AIPVLMLI---FWTYFLMPILLH-------TDVPGLASVVCALALV 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K
Sbjct: 107 GGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
           ++SLA  VG  +L  V   + N+
Sbjct: 167 DTSLAYIVGVPELSFVATQVNNR 189


>gi|167828955|ref|ZP_02460426.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei 9]
          Length = 300

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 149 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 206

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 207 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 266

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 267 LSIVQAQVERRYARGAVREPE 287


>gi|229824368|ref|ZP_04450437.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271]
 gi|229786168|gb|EEP22282.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271]
          Length = 535

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 69/123 (56%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++ +S  T A+IAE+VR G+ A+ +GQ EAA A+G+ H +  + V++PQ  R+I+P + +
Sbjct: 390 FLVVSINTGAYIAEVVRGGIYAIDKGQFEAARAIGMNHWQTMKEVVMPQVFRTILPSVGN 449

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++  +K++S+   +  ++L     TI     +  E   +   IY  L+  I   +  + 
Sbjct: 450 EFVINVKDTSVLNVISVSELYFTTKTIAGNNFRYFETFFVTAVIYFILTFTITSLLRAIE 509

Query: 390 AKI 392
            +I
Sbjct: 510 KRI 512


>gi|146319722|ref|YP_001199434.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|146321918|ref|YP_001201629.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|253752712|ref|YP_003025853.1| putative amino-acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|253754538|ref|YP_003027679.1| amino-acid ABC transporter permease protein [Streptococcus suis
           P1/7]
 gi|253756471|ref|YP_003029611.1| amino-acid ABC transporter permease protein [Streptococcus suis
           BM407]
 gi|145690528|gb|ABP91034.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|145692724|gb|ABP93229.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|251817001|emb|CAZ52650.1| putative amino-acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251818935|emb|CAZ56778.1| putative amino-acid ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251820784|emb|CAR47546.1| putative amino-acid ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|292559333|gb|ADE32334.1| Amino acid ABC transporter, permease protein [Streptococcus suis
           GZ1]
 gi|319759128|gb|ADV71070.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis JS14]
          Length = 219

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 18/186 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+++++  T L +       K +   YI  +++ G P LV +   Y + F  P 
Sbjct: 29  ILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVIFFGLPS 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG         V   F S  +  S  T A+ AE +R+ + +VP+GQ+EA  ++G++  + 
Sbjct: 83  LG--------IVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVGMSFAQT 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEI 366
            R ++LPQA R   PPL++  + L+K++SLA  +   ++      I  +T +      E+
Sbjct: 135 MRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPFALYCEV 194

Query: 367 ILIWMF 372
            L+++F
Sbjct: 195 ALVYLF 200


>gi|134102704|ref|YP_001108365.1| putative amino acid ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007839|ref|ZP_06565812.1| putative amino acid ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133915327|emb|CAM05440.1| putative amino acid ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 235

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG+V + FA  L+R    +  + +  +YI  F         +I L +   +  P LG   
Sbjct: 27  LGLVFA-FAAGLARGARSRVLRGIGFVYIEFFR-----GAAVIVLAFWFVYALPSLGW-- 78

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 + P +  + +ALS    A+ AE+VR  + AVP+ Q+EAA AL +T  +  R V+
Sbjct: 79  -----QLEPLWAGI-LALSLNIGAYGAEVVRGAIRAVPQAQVEAATALNMTGWQRMRRVV 132

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           LPQA  +++PP T+  + LLK S++   V   +L   G  + N T
Sbjct: 133 LPQAFVAMVPPFTNNLIELLKASAVVSVVSIPELTLQGQLVRNGT 177


>gi|152985671|ref|YP_001349968.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PA7]
 gi|150960829|gb|ABR82854.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PA7]
          Length = 232

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  +  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEILAGSLKATPHGEIEAAKAMGMSRLQMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+      + +Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLVDITGAARNVYSQYYLPFEAFITAGLFYLCLTFILVRLF 216


>gi|194467496|ref|ZP_03073483.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194454532|gb|EDX43429.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 487

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 23/181 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD 247
           +F+ + G++L +     ++  +           +S+ LI+   G+P +VL    Y     
Sbjct: 302 IFAMIFGVILGVLGIAQNKFANA----------VSSTLIYIFRGIPMIVLAFFIY----- 346

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +G  N IG     P F++  + L+    A+I  IV+ G  +V  GQ EAA +LGL +
Sbjct: 347 ---MGIPNVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFESVNIGQWEAARSLGLPY 401

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  +L   G  II+Q  +  ++ 
Sbjct: 402 SKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQTGTVIISQNMEGFKMW 461

Query: 368 L 368
           L
Sbjct: 462 L 462



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 20/124 (16%)

Query: 51  NME-KSNLSLGIGFLSERAGFEIDQGIVPYT-SDSSYAT----------------AILVG 92
           N+E +  ++ GI +L +    ++DQ I  YT SD +                   A+L G
Sbjct: 232 NLELQKKMNDGIKWLKDTG--QMDQIIDKYTKSDKTTKDSATDRTILGLIRANYPALLRG 289

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L   G+I A I G ++G   ++ NK    +    + +FR IP +V+ FF+Y  +
Sbjct: 290 LWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFFIYMGI 349

Query: 153 LSVL 156
            +V+
Sbjct: 350 PNVI 353


>gi|94988718|ref|YP_596819.1| histidine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992541|ref|YP_600640.1| histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS2096]
 gi|94542226|gb|ABF32275.1| histidine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94546049|gb|ABF36096.1| Histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS2096]
          Length = 213

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +  R ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|148253984|ref|YP_001238569.1| ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1]
 gi|146406157|gb|ABQ34663.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 598

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 4/145 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F++     +SP F +  + L+   AAF AEI+R G+++V  GQ EAA ALGL   + T  
Sbjct: 158 FSYSTTQLISP-FAAAVLGLALNQAAFAAEIIRGGILSVDHGQYEAAAALGLPRSRQTFR 216

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IW 370
           ++LPQAMRSI+P   +  + L K +S    +   +L      I ++  + I +++   +W
Sbjct: 217 IILPQAMRSILPGAFNDIIGLAKGTSNVYILALPELFYTVQVIFHRNLEVIPLLMVATVW 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
             I L++   +   + R  A+ AL+
Sbjct: 277 YLIILTVLSALQFQVERHFARGALR 301


>gi|330812509|ref|YP_004356971.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380617|gb|AEA71967.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 216

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 1/104 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  +SP +M+  IAL+ +T+A++AEI R  + ++  GQ EA+ +L L   +  R V+L
Sbjct: 78  LAGVEISP-WMAAAIALTLFTSAYLAEIWRGCVDSISHGQWEASASLALNPLEQLRYVIL 136

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           PQA+R  + P     + ++K +++   +GF +L   GG + N T
Sbjct: 137 PQALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 180


>gi|310287214|ref|YP_003938472.1| Glutamate transport system permease protein GluD [Bifidobacterium
           bifidum S17]
 gi|311064074|ref|YP_003970799.1| glutamate transport system permease GluD [Bifidobacterium bifidum
           PRL2010]
 gi|309251150|gb|ADO52898.1| Glutamate transport system permease protein GluD [Bifidobacterium
           bifidum S17]
 gi|310866393|gb|ADP35762.1| GluD Glutamate transport system permease protein [Bifidobacterium
           bifidum PRL2010]
          Length = 362

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F G S  SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   
Sbjct: 134 FAFAGLS--SPSYWAVVLALVLYNGSVVAELVRSGVGNLPNGQREASLALGLTETQSLMQ 191

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +PQA+ +++P   +Q + +LK+++L   + + DL+ 
Sbjct: 192 IEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|307701964|ref|ZP_07638972.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           NCTC 12261]
 gi|307616609|gb|EFN95798.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           NCTC 12261]
          Length = 213

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 23/198 (11%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLY 270
           +G ++ L   +  LIF +P  VLIA   Q+H+ KP+    N     + G+ +  + + +Y
Sbjct: 13  SGASMTLQVFALVLIFSIPLGVLIAFALQVHW-KPLHHLINIYIWIMRGTPLLLQLIFIY 71

Query: 271 -----------------IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                            IA     AA+ AEI R G+  +P GQ EAA  L  +     R 
Sbjct: 72  YVLPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPNGQYEAAKVLKFSPFATVRY 131

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    + + L    I
Sbjct: 132 IILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFLAGA-I 190

Query: 374 YLSLSIMIALFMNRLNAK 391
           YL L  ++ +   ++  K
Sbjct: 191 YLILIGIVTILAKKVEKK 208


>gi|260662492|ref|ZP_05863387.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|260553183|gb|EEX26126.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 245

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 94/177 (53%), Gaps = 12/177 (6%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I + SFV+G+V+++     R+S+   +       +  + +F ++   +  L+   + + F
Sbjct: 39  IAIISFVIGLVIAVITALIRISKPQGKFKAVWAVVRAVFSFYVWLFRSTPLLVQLFIVFF 98

Query: 247 DKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P +G QFN          + +  I  S  T A+ +E +R  L+++P  Q +AA ++G+
Sbjct: 99  GLPNVGIQFN---------AWTAGIITFSLNTGAYASETIRGALLSIPDSQWDAAYSIGM 149

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           T+R+    ++ PQA+R  +PPL++ ++ L+K++SLA ++   ++  V   I +   Q
Sbjct: 150 TYRQVLFRIVFPQALRVALPPLSNSFIGLVKDTSLASSITIVEMFMVSQQIASNNYQ 206


>gi|260467392|ref|ZP_05813564.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259028852|gb|EEW30156.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 72/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS Y + ++AE+ ++G+ A+P+GQ EAA AL LT R     V+ PQ +R++  PL + 
Sbjct: 92  LGLSLYYSGYLAEVFKAGIDAIPKGQQEAARALSLTRRDTVVFVIAPQMLRNVAAPLGNY 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +++LK +     +   +++     I ++T +  E + +   ++L+L+++IA  + R+  
Sbjct: 152 LVSILKATPYLAILAVPEMLGRAFDIASETYRYAEPLTVAGIVFLALALLIAYGVKRIEQ 211

Query: 391 KI 392
           ++
Sbjct: 212 RL 213


>gi|171316138|ref|ZP_02905363.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171098742|gb|EDT43536.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 216

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 1/133 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++    L+ +T+A++AEI R  + AVP+GQ EA+ +L +++ +  R V+LPQ
Sbjct: 80  GLDVSP-WVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  I P     +  +K+++L   +GF +L  VG  I N T +   +  +   IY +L 
Sbjct: 139 AARIAIAPTVGFGVQAVKDTALVSIIGFTELTKVGVAISNATFRPFVVYGLVALIYFALC 198

Query: 379 IMIALFMNRLNAK 391
             +  +   L  +
Sbjct: 199 YPLTRYARTLQRR 211


>gi|126737936|ref|ZP_01753666.1| ABC-type amino acid transport system, permease component
           [Roseobacter sp. SK209-2-6]
 gi|126721329|gb|EBA18033.1| ABC-type amino acid transport system, permease component
           [Roseobacter sp. SK209-2-6]
          Length = 221

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 5/137 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F + Y+A+     A+ AE+VR G+++VP+GQ EAA+A+ ++  +  + ++LPQA+ +++
Sbjct: 86  KFTAGYVAVGMNIGAYGAELVRGGILSVPKGQWEAALAINMSPAQRMQRIILPQALVNML 145

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMI 381
           PP  +  + LLK ++L   +  ADL+     I + T    QA    L+    Y+    M+
Sbjct: 146 PPWGNLMIELLKGTALVSLISVADLMFETKQINSSTFLSAQAFGAALV--IYYILARFMV 203

Query: 382 ALFMNRLNAKIALKEKK 398
             FM  L   +A K  +
Sbjct: 204 TPFMRWLEGYMARKMGR 220


>gi|91778290|ref|YP_553498.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|296160736|ref|ZP_06843550.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|91690950|gb|ABE34148.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295889039|gb|EFG68843.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 216

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 1/116 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP   ++     C +A++IAEI+R G +++P G +EAA  LGL+     R +L+PQ
Sbjct: 81  GINVSPVVAAISTVSLC-SASYIAEILRGGFLSIPPGHLEAARMLGLSPFDMLRRILVPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           A R  +P L ++ + L+K SSL   VG A+L      I   T + +E  L    IY
Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEAYLAAGLIY 195


>gi|107023048|ref|YP_621375.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686711|ref|YP_839958.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170735480|ref|YP_001774594.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|254250728|ref|ZP_04944047.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
 gi|105893237|gb|ABF76402.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652426|gb|ABK13065.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124879862|gb|EAY67218.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
 gi|169821518|gb|ACA96099.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 216

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 70/128 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++    L+ +T+A++AEI R  + AVP+GQ EA+ +L +++ +  R V+LPQA R  
Sbjct: 84  PPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           I P     +  +K+++L   +GF +L  VG  I N T +   +  +   IY +L   +  
Sbjct: 144 IAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTR 203

Query: 384 FMNRLNAK 391
           +   L  +
Sbjct: 204 YARTLQRR 211


>gi|326318471|ref|YP_004236143.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375307|gb|ADX47576.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 266

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 72/126 (57%), Gaps = 2/126 (1%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L I LS  TAA +AE+ RSG++AVPRGQ +AA +LG+   +    ++ PQA+R I+P 
Sbjct: 142 LTLPIGLS--TAAVVAEVYRSGVLAVPRGQADAARSLGMKETQVFFAIVFPQALRYIVPA 199

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q + ++K+++    V + +L+     +I      + + LI   +Y  ++  I+    
Sbjct: 200 LVAQLVIVVKDTTFGYVVTYGELMQNARVLIANYHSLVPVYLIVAALYCLVNYAISRASR 259

Query: 387 RLNAKI 392
           RL   +
Sbjct: 260 RLGRPV 265


>gi|15903398|ref|NP_358948.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|182684457|ref|YP_001836204.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|15459002|gb|AAL00159.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|182629791|gb|ACB90739.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
          Length = 232

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 20/161 (12%)

Query: 228 LIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGGSTVS-----PEFM 267
           L+F +P  VLIA   Q+H+                 P+L Q  FI     S         
Sbjct: 45  LLFSIPLGVLIAFALQVHWKPLHYLINIYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLP 104

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  IA     AA+ AEI R G+  +PRGQ EAA  L  +     R ++LPQ  + ++P +
Sbjct: 105 AAIIAFVLNYAAYFAEIFRGGIDTIPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSV 164

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            ++ ++L+K++SL  A+G +DL+    T  N+    + + L
Sbjct: 165 FNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 205


>gi|319784007|ref|YP_004143483.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169895|gb|ADV13433.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 219

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 70/133 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  + L  + A + A+I+R+G++AV  GQ E A ++G    +  R V++PQA+R+ 
Sbjct: 87  PALAAGIVGLGLHFAVYNADIIRAGIVAVDVGQTEGARSIGFGKWQTLRHVVIPQAIRNT 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            PP+    + LLK SS+   +G A+LV      I++T +  E  +    +Y  L++++  
Sbjct: 147 APPIGGNLIALLKESSIVSVIGIAELVHSAQLAISETFRPFEFYITAAALYYILNLVLEA 206

Query: 384 FMNRLNAKIALKE 396
            + R    + +  
Sbjct: 207 ALRRFERHVEVSR 219


>gi|293393703|ref|ZP_06638012.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291423825|gb|EFE97045.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 242

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 81/135 (60%), Gaps = 1/135 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   AA++A  V++G++A+  GQ +A ++LGLT  +   L++LPQA+R +
Sbjct: 94  PEITTVVCALALIAAAYLAHAVKAGIVAIGPGQWQAGLSLGLTRWQTLALIVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y    + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVGELTFLATQVNNRSMAYPMEVFLFVALVYFVFCLALD 213

Query: 383 LFMNRLNAKIALKEK 397
           L  + LN + + + K
Sbjct: 214 LLASGLNKRFSPQTK 228


>gi|289677305|ref|ZP_06498195.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. syringae FF5]
 gi|330981782|gb|EGH79885.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 232

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L + P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKSTPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|221212964|ref|ZP_03585940.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
 gi|221167177|gb|EED99647.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
          Length = 250

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 12/143 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL L +I  F    +P L+LI   +  +F  P+L         T  P   S+  AL+  
Sbjct: 59  RALLLAFIGFFR--AIPVLMLI---FWTYFLMPILLH-------TDVPGLASVVCALALV 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K
Sbjct: 107 GGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
           ++SLA  VG  +L  V   + N+
Sbjct: 167 DTSLAYIVGVPELSFVATQVNNR 189


>gi|210629973|ref|ZP_03296196.1| hypothetical protein COLSTE_00080 [Collinsella stercoris DSM 13279]
 gi|210160724|gb|EEA91695.1| hypothetical protein COLSTE_00080 [Collinsella stercoris DSM 13279]
          Length = 212

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 68/124 (54%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A + +T+A +AEIVR+GL A+P GQ EAA + G       R ++LPQ  ++I P L  Q
Sbjct: 85  LAFTLFTSAVMAEIVRAGLNAIPAGQFEAAQSQGFGFFATMRYIILPQTFKTITPALFGQ 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNR 387
              ++K+SS    +  A+ +     ++       ++++++ F+   Y +L+  I+L + R
Sbjct: 145 CTTVIKDSSYLSGINVAEFMYTTNVVMAHAVSLDQVLMLYGFVFALYFALNFGISLLVRR 204

Query: 388 LNAK 391
              +
Sbjct: 205 FQRR 208



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 37/64 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ GFV T  ++   ++ + I+GT++   +    + + W+   Y+E+FR  P L+ I F+
Sbjct: 12  IMGGFVKTIEISALSIVCSVILGTVLALVKAYGPRPLRWLVSAYIELFRCTPNLLWILFI 71

Query: 149 YKSV 152
           Y +V
Sbjct: 72  YFTV 75


>gi|15675231|ref|NP_269405.1| putative amino acid ABC transporter permease [Streptococcus
           pyogenes M1 GAS]
 gi|71903621|ref|YP_280424.1| histidine transport system permease protein M [Streptococcus
           pyogenes MGAS6180]
 gi|71910797|ref|YP_282347.1| histidine transporter permease [Streptococcus pyogenes MGAS5005]
 gi|94990607|ref|YP_598707.1| histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS10270]
 gi|209559536|ref|YP_002286008.1| Amino acid ABC transporter, permease protein [Streptococcus
           pyogenes NZ131]
 gi|251782501|ref|YP_002996803.1| histidine transport system permease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|13622400|gb|AAK34126.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes M1 GAS]
 gi|71802716|gb|AAX72069.1| histidine transport system permease protein M [Streptococcus
           pyogenes MGAS6180]
 gi|71853579|gb|AAZ51602.1| histidine transport system permease protein [Streptococcus pyogenes
           MGAS5005]
 gi|94544115|gb|ABF34163.1| Histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS10270]
 gi|209540737|gb|ACI61313.1| Amino acid ABC transporter, permease protein [Streptococcus
           pyogenes NZ131]
 gi|242391130|dbj|BAH81589.1| histidine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323127387|gb|ADX24684.1| Amino acid ABC transporter, permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 213

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +  R ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|330719149|ref|ZP_08313749.1| L-cystine permease [Leuconostoc fallax KCTC 3537]
          Length = 248

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 8/142 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAE 283
           T  I G P L+ + L Y   +  P L   N+IG +T  V+P  + L+I      AAF++E
Sbjct: 61  TSFIRGTPILIQMFLVY---YGLPFL--LNYIGVNTDNVNP-LIYLFITYGLNMAAFLSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+ L +VP  Q EAA+  G T R+    ++ PQAM   IP   +  ++LL+++SLA  
Sbjct: 115 IIRAALESVPATQREAALTSGYTKRQMYMKIIFPQAMVIAIPSFATMVISLLQDTSLAFT 174

Query: 344 VGFADLVSVGGTIINQTGQAIE 365
           +G  D+V     +   T   +E
Sbjct: 175 IGVLDVVGKAKALGTATFHTVE 196


>gi|167589674|ref|ZP_02382062.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 216

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 70/128 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++    L+ +T+A++AEI R  + AVP+GQ EA+ +L +++ +  R V+LPQA R  
Sbjct: 84  PPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYIEQLRHVILPQAARIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           I P     +  +K+++L   +GF +L  VG  I N T +   +  +   IY +L   +  
Sbjct: 144 IAPTVGFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTR 203

Query: 384 FMNRLNAK 391
           +   L  +
Sbjct: 204 YARTLQRR 211


>gi|33599679|ref|NP_887239.1| putative permease component of ABC transporter [Bordetella
           bronchiseptica RB50]
 gi|33567276|emb|CAE31189.1| putative permease component of ABC transporter [Bordetella
           bronchiseptica RB50]
          Length = 216

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 75/123 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS  +AA+++E  RSG++ V RGQ+EAA +LG+   ++   ++LPQA+R   P + ++
Sbjct: 90  LALSLCSAAYLSENFRSGILGVDRGQIEAAQSLGMGAARSLFRIILPQAIRIAAPTMGTR 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           Y+ L+K++SLA  +   +L  +   + + T + +E+ +I   +Y  ++ M+      + +
Sbjct: 150 YIALMKDTSLASTITVVELTKMAEQVGSNTFRYMEMFIIAGALYWVINQMLTFIQVWVES 209

Query: 391 KIA 393
           K+ 
Sbjct: 210 KLG 212


>gi|59802319|ref|YP_209031.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|194099717|ref|YP_002002852.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999906|ref|ZP_04719830.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae 35/02]
 gi|240013147|ref|ZP_04720060.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae DGI18]
 gi|240015590|ref|ZP_04722130.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA6140]
 gi|240081802|ref|ZP_04726345.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA19]
 gi|240114081|ref|ZP_04728571.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae MS11]
 gi|240114680|ref|ZP_04728742.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID18]
 gi|240116882|ref|ZP_04730944.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID1]
 gi|240120218|ref|ZP_04733180.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID24-1]
 gi|240126636|ref|ZP_04739522.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae SK-92-679]
 gi|240127226|ref|ZP_04739887.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae SK-93-1035]
 gi|254492736|ref|ZP_05105907.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268595715|ref|ZP_06129882.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           35/02]
 gi|268597901|ref|ZP_06132068.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           FA19]
 gi|268600151|ref|ZP_06134318.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           MS11]
 gi|268600324|ref|ZP_06134491.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID18]
 gi|268602556|ref|ZP_06136723.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID1]
 gi|268685217|ref|ZP_06152079.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268685585|ref|ZP_06152447.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|293397954|ref|ZP_06642160.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|59719214|gb|AAW90619.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|193935007|gb|ACF30831.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae NCCP11945]
 gi|226511776|gb|EEH61121.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268549104|gb|EEZ44522.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           35/02]
 gi|268551689|gb|EEZ46708.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           FA19]
 gi|268584282|gb|EEZ48958.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           MS11]
 gi|268584455|gb|EEZ49131.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID18]
 gi|268586687|gb|EEZ51363.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID1]
 gi|268625501|gb|EEZ57901.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268625869|gb|EEZ58269.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291611900|gb|EFF40969.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|317165201|gb|ADV08742.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 219

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+G++AVP+GQ+ A  A+GL+  +  R V LPQ     +P + +  
Sbjct: 92  ALVFLGASYMAEAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANI 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+   VG A+L+ V   +I    +  E + +    YL + + ++L   R+  +
Sbjct: 152 LFLMKETSVVSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENR 211

Query: 392 I 392
           +
Sbjct: 212 V 212


>gi|260461733|ref|ZP_05809979.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785285|ref|YP_004144761.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032374|gb|EEW33639.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171173|gb|ADV14711.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 268

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 13/209 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VF FVL + L L A  +   +     KA         +I G P L+ I L Y  +    +
Sbjct: 67  VFGFVLALPLGL-AQVVGPSWLSLPAKAF------CTVIRGTPLLLQIWLLY--YGLGSL 117

Query: 251 LGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             Q+ +I  S + P     +    +AL+   A ++ E++R     VP GQ+EA  A G+ 
Sbjct: 118 FPQYPWIRESDIWPLVRQAWPYAVLALTLSFAGYVGEVMRGAFAGVPSGQLEAGRAFGMN 177

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R V LPQA+   +P L  + +  LK++ L   +   DL +V   +   T    E 
Sbjct: 178 RWKLFRRVWLPQAIHKALPTLAGETVMQLKSTPLVATITVVDLYAVSARVRQDTLVIYEP 237

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L+    Y+ L+ ++    +R+ A+I ++
Sbjct: 238 LLLLALTYMVLTGLLVWIFSRIEARIPVR 266


>gi|167619033|ref|ZP_02387664.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis Bt4]
          Length = 219

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 14/211 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLVVA-IVRIGNNRFLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 AQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L    IY  LS ++     R+  + AL    
Sbjct: 189 LAAAAIYWVLSTLLVRLQGRIETRCALPSTH 219


>gi|148261727|ref|YP_001235854.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidiphilium cryptum JF-5]
 gi|326405221|ref|YP_004285303.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146403408|gb|ABQ31935.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidiphilium cryptum JF-5]
 gi|325052083|dbj|BAJ82421.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 242

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 8/116 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++ I   Y +    P+ G  +  G  T +  + +L I L     A++AEI R+GL 
Sbjct: 75  GLPHILTI---YLIGQGLPIAG-LSLFGNDTYA--YAALSIGL--IEGAYMAEIFRAGLQ 126

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +V RGQ+EAA  LG+T  +  R ++LPQ +R ++PPLT Q++ ++K ++L   +G 
Sbjct: 127 SVERGQIEAARTLGMTRWQTMRDIILPQGIRRVLPPLTGQFILVIKGTALVFLLGL 182



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T + VG  NT  LA    +   ++G  +  G L+   +V   CRVYV++ R +P ++ I+
Sbjct: 24  TLLRVGLPNTILLAVLASLIGMVVGLAIATGLLARPAVVRLACRVYVDILRGLPHILTIY 83

Query: 147 FLYKSVLSVLPIPDHSI 163
            + +     LPI   S+
Sbjct: 84  LIGQG----LPIAGLSL 96


>gi|167724446|ref|ZP_02407682.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           DM98]
          Length = 229

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 81  ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 138

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 139 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 198

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 199 LSIVQAQVERRYARGAVREPE 219


>gi|91789328|ref|YP_550280.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698553|gb|ABE45382.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 220

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 75/134 (55%), Gaps = 1/134 (0%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G  +SPE  S+ IA+    +A+  EI+R+G+ A P+GQ+EAA++L L   +    V+LP
Sbjct: 83  AGIKLSPEVASI-IAMVINLSAYATEIIRAGIDATPKGQIEAAMSLALNRMQTFVRVVLP 141

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A+R + P L SQ + ++  S++   +   +L      I ++  +A E  ++   +YL+L
Sbjct: 142 PALRKVWPSLVSQIIIVMLGSAVCGQISTEELSYAANLIQSRNFRAFEAYIVATLVYLTL 201

Query: 378 SIMIALFMNRLNAK 391
           ++ +   +N L  +
Sbjct: 202 AVGVRQLLNWLGPR 215


>gi|19746201|ref|NP_607337.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS8232]
 gi|94994530|ref|YP_602628.1| Histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS10750]
 gi|139473660|ref|YP_001128376.1| putative amino acid ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
 gi|306827253|ref|ZP_07460540.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|19748383|gb|AAL97836.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS8232]
 gi|94548038|gb|ABF38084.1| Histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS10750]
 gi|134271907|emb|CAM30145.1| putative amino acid ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
 gi|304430400|gb|EFM33422.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 213

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +  R ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|325694842|gb|EGD36747.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 219

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRFIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|253574816|ref|ZP_04852156.1| L-cystine ABC transporter, permease [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251845862|gb|EES73870.1| L-cystine ABC transporter, permease [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 214

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 87/168 (51%), Gaps = 18/168 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  ++G+V+++   RL  ++  +    +  +Y+S  +I G P LV I + Y    D    
Sbjct: 28  FGLIIGLVVAI--ARLKGNWLVR---GIARVYVS--VIRGTPLLVQIFIVYYGVVDY--- 77

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  G T+ P   + Y+ALS    A+++E  R  + ++P+GQ EAA A G+T     
Sbjct: 78  -------GITLGP-LTAAYVALSINVGAYLSETFRGAIQSIPKGQTEAAYATGMTGWMTM 129

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           R ++LPQA R  I P+ + ++ +LK ++L  A+   +L+     +I Q
Sbjct: 130 RRIILPQAARVAIAPMGNTFIGMLKETALVSAITVTELLRSAQLLIAQ 177



 Score = 40.8 bits (94), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 30/57 (52%), Gaps = 6/57 (10%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           IIG +V   RL  N LV  I RVYV V R  P LV IF +Y  V+      D+ I L
Sbjct: 31  IIGLVVAIARLKGNWLVRGIARVYVSVIRGTPLLVQIFIVYYGVV------DYGITL 81


>gi|296158385|ref|ZP_06841216.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891329|gb|EFG71116.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 218

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 22/211 (10%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFD 247
           FV S VLG+VL+L     +R               +TF+  I GLP +V +   + ++F 
Sbjct: 28  FVLSTVLGLVLALMRVSDNRAVSNAA---------ATFINVIRGLPIIVQL---FYIYFV 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P LG    +  S     F+ L +A S Y A    E  R+G+ A+  GQ+EAA ++G+  
Sbjct: 76  LPDLG----VQLSAFQAGFIGLGVAYSVYQA----ENFRAGIQAIDPGQIEAAQSIGMRG 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R V+LPQA R  +P   +  + +LK+SSLA  +  A++   G  I + T Q + + 
Sbjct: 128 AMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQNMTVF 187

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +YL LS+ +   + R+  ++ LK K+
Sbjct: 188 TLVALLYLGLSLPLVYGLRRIERRLGLKGKR 218


>gi|295103462|emb|CBL01006.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 227

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 7/133 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA +    A+ AE +R  L +VP+GQ+EA   +G++  +  R ++LPQA+R+ +P
Sbjct: 95  FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGYCVGMSWWQIMRRIVLPQALRTAVP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++  + ++K++SLA  +  A+L   G  +  +T        I++ IY  ++++  LF 
Sbjct: 155 ALSNSLIGMIKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207

Query: 386 NRLNAKIALKEKK 398
             +    AL E++
Sbjct: 208 TVITKLQALLERQ 220


>gi|254389485|ref|ZP_05004712.1| glutamate transport system permease protein gluD [Streptomyces
           clavuligerus ATCC 27064]
 gi|294815862|ref|ZP_06774505.1| Putative glutamate ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444204|ref|ZP_08218938.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197703199|gb|EDY49011.1| glutamate transport system permease protein gluD [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328461|gb|EFG10104.1| Putative glutamate ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
          Length = 291

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 69/120 (57%), Gaps = 3/120 (2%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L   L+ Y  + +AE+ R+G+ +V RGQ EAA ALGL   +    VL+PQA+R+++P +
Sbjct: 134 ALVAGLTLYNGSVLAEVFRAGVHSVDRGQREAAYALGLRKTQVMTYVLVPQAVRAMLPAI 193

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384
            SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ L ++++ F
Sbjct: 194 ISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGLCMLLSWF 253


>gi|73537419|ref|YP_297786.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72120756|gb|AAZ62942.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 223

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 71/128 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    A+++E +R  ++ + RGQ  AA +LGL+H +  R ++ PQA+R  +P L + 
Sbjct: 96  LTLTANAGAYLSESMRGAILGISRGQWSAAHSLGLSHLQTLRYIVCPQALRLAVPSLGNT 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     II  T Q + + L    IY  LS  ++    R+ A
Sbjct: 156 LISLIKDTSLVSVITVTELLRSSQEIIASTFQPLPLYLSVAAIYWLLSTGLSWVQRRIEA 215

Query: 391 KIALKEKK 398
           ++ L+  +
Sbjct: 216 RLTLRVTR 223


>gi|220908737|ref|YP_002484048.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7425]
 gi|219865348|gb|ACL45687.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7425]
          Length = 221

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 56/81 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           +L+   AA+ +E+ R+GL +V RGQ EAA++LGLT  ++   ++LPQA+  +IPPL + +
Sbjct: 96  SLALNYAAYESEVFRAGLASVDRGQNEAALSLGLTGEQSFTRIILPQAIPLMIPPLVNDF 155

Query: 332 LNLLKNSSLAVAVGFADLVSV 352
           + +LK+S++   +   DL SV
Sbjct: 156 IYMLKDSAIVSVIAGTDLTSV 176


>gi|309973357|gb|ADO96558.1| Arginine ABC transporter, permease protein ArtQ [Haemophilus
           influenzae R2846]
          Length = 221

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 13/209 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFDK 248
           V S +LG+ LSL    L  +     GK + +      L+ GLP ++++ L Y       +
Sbjct: 21  VCSLILGLFLSLIFVALEAN--RFVGKPMTVFVA---LLRGLPEIIVVLLVYFGSTELVE 75

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            + G++   G       F    +ALS   AA+ ++ +R  + A+P+GQ E+  ALGL+  
Sbjct: 76  MLTGEYIEFGA------FGCGVLALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKS 129

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
                +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q      
Sbjct: 130 YTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWYG 189

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I   IYL+++++  + + +L  +    E+
Sbjct: 190 IAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|118587809|ref|ZP_01545219.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
 gi|118439431|gb|EAV46062.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
          Length = 211

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 27/173 (15%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+    F+ FGLP L    L YQ  F    L                   +ALS   +A
Sbjct: 55  PLIVQMFFVAFGLPLL----LGYQWPFWAHAL-------------------LALSINFSA 91

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R+GL ++  GQ EAA ALGL    +   V LPQA+ ++ P L SQ++ L   + 
Sbjct: 92  YFAEILRAGLASLGAGQAEAADALGLPRWLSFVKVCLPQAVAAMYPSLNSQFIFLFLTTG 151

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIALFMNRL 388
           +   +G  DL   G  I ++  ++ EI      IYL +S+    ++AL  +RL
Sbjct: 152 IISEIGVTDLTWAGLVIDSRNFRSFEIFFTLTIIYLLMSLGFKTLLALLHDRL 204


>gi|187924720|ref|YP_001896362.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187715914|gb|ACD17138.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 218

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 22/179 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFD 247
           FV S VLG++L+L     +R               +TF+  I GLP +V +   + ++F 
Sbjct: 28  FVLSTVLGLLLALMRVSDNRVVSNAA---------ATFINVIRGLPIIVQL---FYIYFV 75

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P LG    +  S     F+ L IA S Y A    E  R+G+ A+  GQ+EAA ++G+  
Sbjct: 76  LPDLG----VQLSAFQAGFIGLGIAYSVYQA----ENFRAGIQAIDHGQIEAAQSIGMRG 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
               R V+LPQA R  +PP  +  + +LK+SSLA  +  A++   G  I + T Q + +
Sbjct: 128 AMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQNMTV 186



 Score = 37.0 bits (84), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  + F   + +T++G L+   R+S N++V+     ++ V R +P +V +F++
Sbjct: 13  LLKGAVVTIEITFCSFVLSTVLGLLLALMRVSDNRVVSNAAATFINVIRGLPIIVQLFYI 72

Query: 149 Y 149
           Y
Sbjct: 73  Y 73


>gi|116334030|ref|YP_795557.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099377|gb|ABJ64526.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 229

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 19/208 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +F L  +  +  T L++  H +    L   YIS   + G+P LV++ + Y        
Sbjct: 35  VMAFGLATIWGMLLT-LAQLSHVRVLHGLARAYIS--FMRGVPMLVVLFIVY-------- 83

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F F  G T  P  +   I+ +   AAF++E+ RS  + +  GQ EAA ++GL +RK 
Sbjct: 84  ---FGF--GLTAVPAAI---ISFTLGAAAFVSEVFRSAFLGIDHGQYEAAYSIGLPYRKV 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R +++PQA R  IP L +  L++ K +SLA  +   D+      +       + I +  
Sbjct: 136 MRFIIIPQAFRISIPALGNILLDMFKGTSLAAMITVTDMFMQAKIVAGANQDYMTIYITI 195

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +Y    ++I    N+L   +     K
Sbjct: 196 AILYWLCCVVITTGQNQLERWLDFDRPK 223


>gi|326803651|ref|YP_004321469.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651650|gb|AEA01833.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 230

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 28/183 (15%)

Query: 189 IFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYIST------FLIF-GLPTLVLI 238
           I + SF LG +L L   +     + ++++  K    +   T      FL+F GLP L+  
Sbjct: 26  ILIISFTLGNLLGLILAYGLEAKQRWYQQITKTYIFIMRCTPPIVMIFLVFYGLPQLLKW 85

Query: 239 ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            LK  +H F + V                  + IAL+    A I+ + ++   AV +GQ 
Sbjct: 86  WLKINIHDFSQAVF-----------------VIIALTLLYGANISVVFKASYDAVNKGQR 128

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA +ALGL+  +    +LLPQA+R  +P + +  ++LLKN++LA  +G  D++  G   I
Sbjct: 129 EAGLALGLSEARTFFRILLPQALRIALPNIGNSTVSLLKNTALAYTIGLIDVMGAGQLFI 188

Query: 358 NQT 360
           N+ 
Sbjct: 189 NRN 191


>gi|307729124|ref|YP_003906348.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583659|gb|ADN57057.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 225

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+ L+ F   L R F  K   A    Y+  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLALA-FIVALVRLFGPKWAVAAVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ +E++R  + ++P+GQ EAA ++G+T  +A R
Sbjct: 84  --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ ++ L+K++SLA  +   ++      I + T + + +      
Sbjct: 136 RAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195

Query: 373 IYLSLSIMIALFMNRLNAK 391
           +YL  S +++    RL  K
Sbjct: 196 VYLLFSSVLSSAQVRLERK 214


>gi|229918160|ref|YP_002886806.1| polar amino acid ABC transporter inner membrane subunit
           [Exiguobacterium sp. AT1b]
 gi|229469589|gb|ACQ71361.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sp. AT1b]
          Length = 216

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 73/129 (56%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L   L  + AA+I+E  R+ + +V +GQ+EA++ALG+   K  + ++ PQA+   IPP
Sbjct: 88  QALIFGLGFHFAAYISEAFRAAINSVDKGQVEASVALGIPKMKRFKDIIFPQALSRAIPP 147

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +++  ++++K++SL   +   +L  V   I   T   + ++L    IY  LS +I    +
Sbjct: 148 VSNSVIDIIKSTSLGSVIAVQELTYVSDQIAATTYLVMPLLLFSASIYWILSTLIQAGQH 207

Query: 387 RLNAKIALK 395
           +L  + A++
Sbjct: 208 KLEQRYAIR 216


>gi|270292830|ref|ZP_06199041.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270278809|gb|EFA24655.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 229

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 24/176 (13%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259
           +G ++ L      LIF +P  VLIA   Q+H+                 P+L Q  FI  
Sbjct: 29  SGASMTLQVFVLVLIFSIPLGVLIAFALQVHWKLLHYLINIYIWIMRGTPLLLQLIFI-- 86

Query: 260 STVSP-------EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             V P          +  IA     AA+ AEI R G+  +P+GQ EAA  L  +     R
Sbjct: 87  YYVLPNIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKGQYEAAKVLKFSPFATVR 146

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    + + L
Sbjct: 147 YIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLVPMFL 202


>gi|170693091|ref|ZP_02884252.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia graminis C4D1M]
 gi|170142089|gb|EDT10256.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia graminis C4D1M]
          Length = 219

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 67/123 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ +EI+R  L +VP GQ EAA+AL ++     R ++LPQAM + +PP T+ 
Sbjct: 88  VGLGLHYGAYGSEILRGALRSVPGGQFEAALALNMSPLTRMRRIILPQAMINALPPATNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +SL   +  +DL      +   T +  EI ++ + IY  L+ ++   M     
Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDEATFKTAEIFMLTLVIYFVLAQILVALMRHFEH 207

Query: 391 KIA 393
           +++
Sbjct: 208 RVS 210


>gi|167820594|ref|ZP_02452274.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           91]
          Length = 313

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|311280751|ref|YP_003942982.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
 gi|308749946|gb|ADO49698.1| binding-protein-dependent transport systems inner membrane
           component [Enterobacter cloacae SCF1]
          Length = 226

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 10/136 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LLY    +I G+P + +I   + L +  P L   +  G  TV+       +AL+ +T+A 
Sbjct: 63  LLYGWAEVIRGIPLIFVI---FWLWYLLPWLTGSDLPGAVTVT-------LALAWFTSAA 112

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +   V +G+ A+  GQ EAA+A G +  +  R VLLPQA+R+++P L    ++LLK++SL
Sbjct: 113 VMHTVYAGVQALHDGQREAALAQGFSGGQTLRRVLLPQALRNVLPSLVGIGISLLKDTSL 172

Query: 341 AVAVGFADLVSVGGTI 356
           A  V   +L +V G +
Sbjct: 173 AFIVNVPELTTVAGQV 188


>gi|260462849|ref|ZP_05811054.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259031493|gb|EEW32764.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 269

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 6/172 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ + L Y  +    +  Q+ +I  S + P     +    +AL+   A +  E
Sbjct: 98  VIRGTPLLIQLWLLY--YGLGSLFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGYEGE 155

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R     VP+GQ+EAA A G++  K  R + LPQA    +P LT + +  LK++ L   
Sbjct: 156 VMRGAFAGVPKGQLEAARAFGMSRWKIFRRIWLPQAFYRALPTLTGETVLQLKSTPLVAT 215

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   D+ +V   +   T    E +L+   IY++++ ++     R+ A+I  K
Sbjct: 216 ISVIDIFAVSSKVRQDTYLTYEPLLLLALIYMTITGILVFAFGRIEARIPNK 267


>gi|160943011|ref|ZP_02090249.1| hypothetical protein FAEPRAM212_00488 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445705|gb|EDP22708.1| hypothetical protein FAEPRAM212_00488 [Faecalibacterium prausnitzii
           M21/2]
          Length = 227

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 75/133 (56%), Gaps = 7/133 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA +    A+ AE +R  L +VP+GQ+EA   +G++  +  R ++LPQA+R+ +P
Sbjct: 95  FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGYCVGMSWWQIMRRIVLPQALRTAVP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++  + ++K++SLA  +  A+L   G  +  +T        I++ IY  ++++  LF 
Sbjct: 155 ALSNSLIGMIKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207

Query: 386 NRLNAKIALKEKK 398
             +    AL E++
Sbjct: 208 TVITKLQALLERQ 220


>gi|86149175|ref|ZP_01067407.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840533|gb|EAQ57790.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 233

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLDLICLSIEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 82  DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D  +  A    F+   WL    +F G+I + IIG           K++  IC++Y+E  R
Sbjct: 2   DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61

Query: 138 NIPPLVVIFFLYKSV 152
           N P L+ +FFLY ++
Sbjct: 62  NTPLLIQLFFLYYAL 76


>gi|239816392|ref|YP_002945302.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802969|gb|ACS20036.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 223

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 1/111 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   SP+  +L +A+     A+  EI+R+G+ ++P+GQ+EA  AL L   +  R V++  
Sbjct: 84  GLRWSPQTAAL-VAMVVNLGAYATEIIRAGIESIPKGQIEAGRALNLKPWEIFRFVIIKP 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A+++I P LTSQ++ L+ +S++   +   DL SV   + +QT ++ EI ++
Sbjct: 143 ALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANLQSQTFRSFEIYIV 193


>gi|170696019|ref|ZP_02887157.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139099|gb|EDT07289.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 225

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+ L+ F   L R F  K   A    Y+  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLALA-FIVALVRLFGPKWAVAAVRFYV--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ +E++R  + ++P+GQ EAA ++G+T  +A R
Sbjct: 84  --------IVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTREQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ ++ L+K++SLA  +   ++      I + T + + +      
Sbjct: 136 RAILPQATRVALPPLSNSFIALVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTEAAL 195

Query: 373 IYLSLSIMIALFMNRLNAK 391
           +YL  S +++    RL  K
Sbjct: 196 VYLLFSSVLSSAQVRLERK 214


>gi|116250818|ref|YP_766656.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255466|emb|CAK06542.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 230

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 23/210 (10%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIF-GLPTLVLIALKY-- 242
           IFVFS ++G   SLFA    R         +PLL    ++  ++F G+P +++I L Y  
Sbjct: 28  IFVFSTIVG---SLFAMVEYRR--------VPLLRELVVAYKVVFKGVPMVIVIFLAYYG 76

Query: 243 ---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               L F   ++G  ++ G ST  P +++L +AL+   AAF AE+V+  L +   GQ +A
Sbjct: 77  LPPTLQFLTSLVG-IDYNGHST--PNWITLIVALTACVAAFQAEVVKGALNSFDNGQADA 133

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LG    +  R V+LPQ + + IP L +  + ++K  SL  A+   D+ +        
Sbjct: 134 AYSLGYKRSQLFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQSQLTAAL 193

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
               +E  LI + IY+ ++ ++    +R+ 
Sbjct: 194 NFYYLEAFLIAVVIYMVIAYIVTYAADRME 223


>gi|327184148|gb|AEA32595.1| amino acid ABC transporter permease [Lactobacillus amylovorus GRL
           1118]
          Length = 215

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P + +   A     AA+ AEI R G  ++ +GQ EAA  L L   +    +++PQ ++
Sbjct: 82  VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDQGQFEAAQVLHLNRWQTMTKIVIPQVIK 141

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P + ++ +NL+K+SSL   +G  DL+  G   + +    + ++L+ + IYL L  + 
Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLFLISIC 200

Query: 382 ALFMNRLN 389
           A  + RL 
Sbjct: 201 AFILKRLE 208


>gi|314922832|gb|EFS86663.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 gi|314966263|gb|EFT10362.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
 gi|314980789|gb|EFT24883.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
 gi|315090238|gb|EFT62214.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
 gi|315093427|gb|EFT65403.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
 gi|327327044|gb|EGE68825.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Propionibacterium acnes HL103PA1]
          Length = 198

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +GL  ++   L  ++ F  P   QF  I    V     +  I L     A++ EI RS
Sbjct: 1   MFWGLLAVLYPTLPIEVPFGGP---QFASIETEQVVTTLATTIIGLDLNENAYLTEITRS 57

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL +V  GQ EAA  LG+      R V++PQ MR II PL ++ + +LK +SL +AV F 
Sbjct: 58  GLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGNETIGMLKTTSLVLAVPFT 117

Query: 348 -DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            DL      + N+    I ++++  F YL ++
Sbjct: 118 LDLQYATSAMANRIYAPIPLLVVTAFWYLVMT 149


>gi|309390079|gb|ADO77959.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 214

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 68/118 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +  + AE +R  + ++   Q++AA ++G+T  +  R ++LPQA+R +IP  T++++ ++K
Sbjct: 96  SGVYQAEYLRGSIQSISGSQLKAAQSIGMTKWQGIRYIILPQALRRVIPAWTNEFIYMIK 155

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSLA  +G  +L++    + ++  Q   +  +   IYL++ +      NRL  K+ +
Sbjct: 156 YSSLAYVIGAKELMTEAKLLASRNYQFFNVYFLVALIYLAVIMFFVYLFNRLEKKVTI 213



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y    L G   T ++        TI+G+L+  G++  NK+++ + R+++ + R  P L
Sbjct: 6   SEYYPLFLRGLGVTVFVTIISCFSGTILGSLLALGKIYGNKVISTLVRIFISIIRGTPLL 65

Query: 143 VVIFFLY 149
           V +F +Y
Sbjct: 66  VQLFIIY 72


>gi|167850428|ref|ZP_02475936.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei B7210]
          Length = 302

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 151 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 208

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 209 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 268

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 269 LSIVQAQVERRYARGAVREPE 289


>gi|116070916|ref|ZP_01468185.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. BL107]
 gi|116066321|gb|EAU72078.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. BL107]
          Length = 324

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 3/116 (2%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE VR GL A+   Q EAA+ LGL+ R+  +LV+LPQA R  +P LT+Q + LL+N+S
Sbjct: 202 YIAEDVRGGLQAISPTQREAAMVLGLSPRQTLQLVVLPQAFRVALPSLTNQAVGLLQNTS 261

Query: 340 LAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +G  +L+ +  +++      G+ +E+ +    +Y      +AL    L  ++
Sbjct: 262 LMAILGLVELLGISRSLLANPEFIGRYLEVYIWLAAVYWLACTAMALLARHLEIQL 317


>gi|77457436|ref|YP_346941.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77381439|gb|ABA72952.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 242

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 2/151 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      L  +       + P F +  + L     A+  E 
Sbjct: 67  TTLIRGVPDLVLMLLIFYSLQTWLTTLTDYLEWEYIEIDP-FSAGVLTLGFIYGAYFTET 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AVPRGQ+EAA A GL   +  R V+ PQ MR  +P + + ++ +LK ++L   +
Sbjct: 126 FRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGIGNNWMVMLKATALVSII 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           G ADLV         T Q    +++   IYL
Sbjct: 186 GLADLVKAAQDAGKSTYQLFYFLVLAALIYL 216


>gi|302522780|ref|ZP_07275122.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|318059837|ref|ZP_07978560.1| putative glutamate ABC transporter permease protein [Streptomyces
           sp. SA3_actG]
 gi|318077306|ref|ZP_07984638.1| putative glutamate ABC transporter permease protein [Streptomyces
           sp. SA3_actF]
 gi|302431675|gb|EFL03491.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 298

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L   L+ Y  + +AE+ RSG+ +V RGQ EAA ALG+   +    +L+PQA+R+++P +
Sbjct: 143 ALVTGLTLYNGSVLAEVFRSGIASVDRGQREAAYALGMRKTQVMAYILIPQAVRAMLPSI 202

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            SQ +  LK++SL   + + + +  G  I +     +  I + M I   + I + + ++ 
Sbjct: 203 ISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVIS-PVYIGMCMLLSW 261

Query: 388 LNAKIALKEKK 398
           L   +A +E++
Sbjct: 262 LAQGLARRERR 272



 Score = 40.4 bits (93), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           GRLS ++LV W     VE FR +P LV+IFF++ + L V P+P
Sbjct: 101 GRLSEHRLVRWPATALVEFFRAMPVLVMIFFVFIA-LKVQPLP 142


>gi|170749710|ref|YP_001755970.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170656232|gb|ACB25287.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 249

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 70/117 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+LS +  AF  EI RSG+ AVPR  +EAA ALG T  KA R V+LP A+R  +P L + 
Sbjct: 121 ISLSLFAGAFNVEIFRSGIEAVPRTTVEAAEALGYTRFKAYRYVVLPLALRVCLPALNNN 180

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +NLLK ++LA A+   + +     I +++   +E++L+ +  Y  L  ++   M+R
Sbjct: 181 LINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYAVLVGVLVWIMHR 237



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E  GF       PY  D   A     G   T  L  S ++ + +IG +    +   ++
Sbjct: 12  LYETTGFNFTVFYDPYDWDRYVA-----GLRMTLLLGISTILASLVIGAVGALLQSGPSR 66

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++  +   +V VFRN PPLV IFF Y  + ++LP
Sbjct: 67  VLRALVNGFVVVFRNTPPLVQIFFFYFGLGTLLP 100


>gi|220923580|ref|YP_002498882.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948187|gb|ACL58579.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 223

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 70/111 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+  EI+R+G+ ++  GQ+EA  +LGL   +  R V+L  A+++I P LTSQ
Sbjct: 95  LALVVNVGAYGIEIIRAGIDSIDPGQIEAGKSLGLKPLQIFRYVVLKPAIQAIYPALTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++ L+ NSS+  A+  ++L +  G I ++  ++ E+ L+   IY +LS+++
Sbjct: 155 FILLMLNSSVCSAIAASELTAAAGDIQSRNFRSFEVYLVVTGIYFALSVVL 205


>gi|115351570|ref|YP_773409.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115281558|gb|ABI87075.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 241

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 94  PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q++ L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|315039015|ref|YP_004032583.1| amino acid ABC transporter, permease protein [Lactobacillus
           amylovorus GRL 1112]
 gi|325957440|ref|YP_004292852.1| amino acid ABC transporter permease [Lactobacillus acidophilus
           30SC]
 gi|312277148|gb|ADQ59788.1| Amino acid ABC transporter, permease protein [Lactobacillus
           amylovorus GRL 1112]
 gi|325334005|gb|ADZ07913.1| amino acid ABC transporter, permease protein [Lactobacillus
           acidophilus 30SC]
          Length = 219

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 1/128 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P + +   A     AA+ AEI R G  ++ +GQ EAA  L L   +    +++PQ ++
Sbjct: 86  VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDQGQFEAAQVLHLNRWQTMTKIVIPQVIK 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P + ++ +NL+K+SSL   +G  DL+  G   + +    + ++L+ + IYL L  + 
Sbjct: 146 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLFLISIC 204

Query: 382 ALFMNRLN 389
           A  + RL 
Sbjct: 205 AFILKRLE 212


>gi|289426755|ref|ZP_06428483.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|289160081|gb|EFD08257.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|314979159|gb|EFT23253.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
 gi|315089120|gb|EFT61096.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
          Length = 182

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A++AEI RSGL +V  GQ EAA ALG+      R  ++PQAMR IIPP  ++
Sbjct: 25  IGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMRRTIIPQAMRVIIPPPGNE 84

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + +LK +SL +A+ F  DL      I N T   I ++++    YL ++
Sbjct: 85  TIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAACWYLVMT 133


>gi|152987100|ref|YP_001348448.1| putative amino acid permease [Pseudomonas aeruginosa PA7]
 gi|150962258|gb|ABR84283.1| probable amino acid permease [Pseudomonas aeruginosa PA7]
          Length = 225

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ ++P GQ  AA ALGL   +  RLV+LPQA+  +
Sbjct: 94  PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  +G  +L  V   + N+      EI L    +Y      + 
Sbjct: 154 LPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLFVALLYFLFCTSLD 213

Query: 383 LFMNRLNAK 391
           LF   L+ +
Sbjct: 214 LFAGFLSRR 222


>gi|90410449|ref|ZP_01218465.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
 gi|90328690|gb|EAS44974.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
          Length = 229

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  +ALS   A++ A+ +R  L AV  GQ EAA ALG++   +   ++LPQA+R
Sbjct: 87  ISP-FVSGVVALSLIFASYAAQTIRGALKAVNNGQREAASALGISKAHSFFRIILPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P LT+Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLTNQWLVLLKDTALVSLIGVTDLL 174



 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 39/67 (58%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y+ +++     T  LAF+ ++   ++  +  +G +S ++LVAW    +V + R +P +
Sbjct: 4   SGYSMSLVEASWMTIQLAFTSLLVGLVLAVIFASGEMSRSRLVAWPTTAFVTILRGLPEI 63

Query: 143 VVIFFLY 149
           +V+ F++
Sbjct: 64  LVVLFIF 70


>gi|29828502|ref|NP_823136.1| glutamate transporter permease [Streptomyces avermitilis MA-4680]
 gi|29605605|dbj|BAC69671.1| putative glutamate ABC transporter permease [Streptomyces
           avermitilis MA-4680]
          Length = 296

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 3/127 (2%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L   L+ Y  + +AE+ RSG+ +V RGQ EAA ALG+   +    VL+PQA+R+++P +
Sbjct: 138 ALVAGLTLYNGSVLAEVFRSGVESVERGQREAAFALGMRKTQVMAHVLVPQAVRAMLPAI 197

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALF 384
            SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ + ++++ F
Sbjct: 198 ISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWF 257

Query: 385 MNRLNAK 391
              ++ +
Sbjct: 258 AQWVSRR 264



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           GRLS +  V W+  + VE FR +P LV+IFF++ + L V P+P
Sbjct: 96  GRLSDHAPVRWVATLVVEFFRAMPVLVMIFFIFVA-LKVQPLP 137


>gi|53719420|ref|YP_108406.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|121598906|ref|YP_992992.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|254178126|ref|ZP_04884781.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia mallei ATCC 10399]
 gi|52209834|emb|CAH35806.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|121227716|gb|ABM50234.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|160699165|gb|EDP89135.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia mallei ATCC 10399]
          Length = 247

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A +ALGLT  +  R VLLPQA+R +
Sbjct: 94  PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|56808075|ref|ZP_00365870.1| COG0765: ABC-type amino acid transport system, permease component
           [Streptococcus pyogenes M49 591]
          Length = 219

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +  R ++LPQ  + ++P + ++
Sbjct: 95  LAFTLNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNE 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 155 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 185


>gi|317049371|ref|YP_004117019.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950988|gb|ADU70463.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 216

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 13/170 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+S  L+ G P +V +   + + F  P LG    +GG       ++  +A+   + A++
Sbjct: 56  LYVS--LMRGTPAIVQL---FVVFFTLPRLG----LGGQ----PMLAAVVAIGLNSGAYV 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R     V RGQ+EAA  LGL+       V+ PQ MR+ +P L +++  LLK + LA
Sbjct: 103 AEILRVNRSLVTRGQLEAARTLGLSRALTWWYVINPQVMRASLPMLVNEFTILLKTTPLA 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   +L   G  +I +T  A +++L+    YL +++ +     RL AK
Sbjct: 163 SVVALTELTYAGQIVIARTYDATQVLLLVAAGYLVIALPLISAARRLEAK 212


>gi|239834626|ref|ZP_04682954.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822689|gb|EEQ94258.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 216

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 22/205 (10%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F F  + G+V++L  T   R       + L   YI  F   G P L+ +   + ++F  P
Sbjct: 28  FTFGGMGGLVVALGRTSAKRWL-----RYLMATYIQIFQ--GTPLLIQL---FFVYFGLP 77

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +LG    I        +++L I LS + +AF+ EI R  + AV  GQ EAA ALG+ +  
Sbjct: 78  ILGIRVDI--------WVALIIGLSLHASAFLGEIWRGSIQAVSTGQDEAARALGIGYFH 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII-- 367
             + V+LPQA R  +P      +NL+K ++LA  +G  +L   G  + N T + +++   
Sbjct: 130 RMKDVVLPQAFRIGLPATIGFLVNLIKGTALAALLGLTELTRSGQLMANITFEPMKVYGT 189

Query: 368 --LIWMFIYLSLSIMIALFMNRLNA 390
             LI+  I + L+   A    RLNA
Sbjct: 190 VGLIYFIICVPLTYYSARIEKRLNA 214


>gi|257070103|ref|YP_003156358.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560921|gb|ACU86768.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 232

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 67/116 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    + L+  +AAF+ E VRSG+  VP G  EAA ++GL      RLV+LPQA RS+
Sbjct: 82  PYFWCGVLGLTLSSAAFVCENVRSGINTVPIGHAEAARSIGLGFFGTLRLVVLPQAFRSM 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           + PL + ++  +  S+L  A+   ++  V  T+  +  QA+ + LI   +YL LS+
Sbjct: 142 VQPLVNVFIGTVIGSALCSAIAVQEVTWVTQTLNIRYAQAVLMFLIAGAVYLILSL 197


>gi|261339173|ref|ZP_05967031.1| hypothetical protein ENTCAN_05397 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319018|gb|EFC57956.1| arginine ABC transporter, permease protein ArtQ [Enterobacter
           cancerogenus ATCC 35316]
          Length = 238

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L         L F + PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFNINLGFAQIPVQMQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A+ ++ +R  L AVP+GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYSAYASQTLRGALKAVPQGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|319792872|ref|YP_004154512.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315595335|gb|ADU36401.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 223

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 68/111 (61%), Gaps = 1/111 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   SP+  +L +A+     A+  EI+R+G+ ++P+GQ+EA  AL L   +  R V++  
Sbjct: 84  GLRWSPQTAAL-VAMVVNLGAYATEIIRAGIESIPKGQIEAGRALNLKPWEIFRFVIIKP 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A+++I P LTSQ++ L+ +S++   +   DL SV   + +QT ++ EI ++
Sbjct: 143 ALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANLQSQTFRSFEIYIV 193


>gi|307727081|ref|YP_003910294.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Burkholderia
           sp. CCGE1003]
 gi|307587606|gb|ADN61003.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. CCGE1003]
          Length = 219

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 67/123 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ +EI+R  L +VP GQ EAA+AL ++     R ++LPQAM + +PP T+ 
Sbjct: 88  VGLGLHYGAYGSEILRGALRSVPGGQFEAALALNMSPLTRMRRIVLPQAMINALPPATNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +SL   +  +DL      +   T +  EI ++ + IY  L+ ++   M     
Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDEATFKTAEIFMLTLVIYFVLAQILVALMRHFER 207

Query: 391 KIA 393
           +++
Sbjct: 208 RVS 210


>gi|167923549|ref|ZP_02510640.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei BCC215]
          Length = 324

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|187919665|ref|YP_001888696.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187718103|gb|ACD19326.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 218

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++  + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQ
Sbjct: 80  GVDVSP-WVAATVTLTLYTSAYLVDIWRGCVEAVPRGQWSAGASLGMTFGQQLRYIVWPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A +  + P     + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++ 
Sbjct: 139 ARKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +  +   L  +  + + +
Sbjct: 199 FPLTWYARVLEKRQKVGQHR 218


>gi|313808161|gb|EFS46635.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
 gi|313818928|gb|EFS56642.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
 gi|313820757|gb|EFS58471.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
 gi|313822478|gb|EFS60192.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
 gi|313825726|gb|EFS63440.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
 gi|314925672|gb|EFS89503.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
 gi|314959775|gb|EFT03877.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
 gi|314986713|gb|EFT30805.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
 gi|314989456|gb|EFT33547.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
 gi|315084061|gb|EFT56037.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
 gi|315085263|gb|EFT57239.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
 gi|327330517|gb|EGE72264.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Propionibacterium acnes HL096PA3]
 gi|327446854|gb|EGE93508.1| hypothetical protein HMPREF9568_00811 [Propionibacterium acnes
           HL013PA2]
 gi|328752530|gb|EGF66146.1| hypothetical protein HMPREF9563_02260 [Propionibacterium acnes
           HL020PA1]
          Length = 182

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A++AEI RSGL +V  GQ EAA ALG+      R  ++PQAMR IIPP  ++
Sbjct: 25  IGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMRRAIIPQAMRVIIPPPGNE 84

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + +LK +SL +A+ F  DL      I N T   I ++++    YL ++
Sbjct: 85  TIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAACWYLVMT 133


>gi|257125147|ref|YP_003163261.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049086|gb|ACV38270.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 225

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 34/215 (15%)

Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           VFS +LG++L +  T  ++       F+ ++ + +PLL     + FG      +A  + L
Sbjct: 34  VFSILLGLILGIVMTSKNKIIYGVLKFYLESMRIIPLLVWLFIIYFG------VAKGFDL 87

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H D                    +  I    +  A + +IVR  +I++P+ Q E+A ALG
Sbjct: 88  HIDSET-----------------TTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  R VLLPQA+R I P   +    ++K +SLA+ +  A+++ +G  II  + +  
Sbjct: 131 LDTIQVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKN 190

Query: 365 EIILIWM-----FIYLSLSIMIALFMNRLNAKIAL 394
            +   W+     F+Y  +   I L   ++  K A+
Sbjct: 191 PMAPFWVYLFIFFLYFIICYPITLLSKKMEKKWAV 225


>gi|34498542|ref|NP_902757.1| histidine transport system membrane protein M [Chromobacterium
           violaceum ATCC 12472]
 gi|34104398|gb|AAQ60756.1| histidine transport system membrane protein M [Chromobacterium
           violaceum ATCC 12472]
          Length = 221

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 4/145 (2%)

Query: 251 LGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           L QF+++  S         Y+    A +  TAA+  EI+   + A   G++EAA ++G++
Sbjct: 67  LAQFDWVRDSWAWHYLQDAYVCAILAFTLNTAAYTTEIIAGQIRATHWGEIEAARSMGMS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H    R ++LP A+R  +P  +++ + +L+++++A  V  ADL  V   I +++    E 
Sbjct: 127 HWLMLRRIVLPSALRRALPAYSNEVIMMLQSTAIAGLVTLADLTGVARRIYSESYMPFEP 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            L    IYL+L+  +   M R   +
Sbjct: 187 FLTAALIYLALTFALVWLMKRAERR 211


>gi|222081570|ref|YP_002540934.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726249|gb|ACM29338.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 230

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 19/216 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIA 239
           +T+     IF+ S ++G   SLFA    R         L  L ++  ++F G+P +++I 
Sbjct: 20  VTLAMALAIFILSTIVG---SLFAMAEYRRV-----PVLRELVVAYKIVFKGVPMVIVIF 71

Query: 240 LKY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L Y      LHF   ++G +FN  G +T  P +++L +AL+   AAF AE+V+  L +  
Sbjct: 72  LAYYGLPPALHFLSSLVGVEFN--GHAT--PNWVTLIVALTLCVAAFQAEVVKGALNSFD 127

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +AA +LG    +  R V+LPQ + + IP L +  + ++K  SL  A+   D+ +  
Sbjct: 128 TGQADAAYSLGYKRSQLFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFAQS 187

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                     +E  LI + +Y+ ++ ++    +R+ 
Sbjct: 188 QLTAALNFYYLEAFLIAVVVYMVIAYVVTFAADRME 223


>gi|167899022|ref|ZP_02486423.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 7894]
          Length = 307

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 153 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 210

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 211 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 270

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 271 LSIVQAQVERRYARGAVREPE 291


>gi|167719667|ref|ZP_02402903.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei DM98]
          Length = 223

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 23/143 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P+L +  +  F LP L        LH D P L                ++  ALS  
Sbjct: 66  RAIPVLMLIFWTYFLLPVL--------LHADVPGLA---------------AVVCALSLV 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K
Sbjct: 103 GGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVK 162

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
           ++SLA  VG  +L  V   + N+
Sbjct: 163 DTSLAYIVGVPELSFVATQVNNR 185


>gi|331700615|ref|YP_004397574.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329127958|gb|AEB72511.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 229

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 32/221 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+   A   +   +LGI+L +      R F  +  + +  LY+  F I  +PT+VL+ L
Sbjct: 24  VTVKIAAVALIVGLILGIILGVL-----RTFKNRPLRVVLRLYLEFFRI--VPTVVLLFL 76

Query: 241 KY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            Y     QL+F+ P               +  +L  AL  + AA +++IVR  LI+VP+ 
Sbjct: 77  FYYILPRQLNFNLP-------------GDQLATLVFAL--WVAAEMSDIVRGALISVPQH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  A+GL   +  R VL+PQA+   IP   +    ++K +SL + +   D++++G  
Sbjct: 122 QRESGKAIGLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQ 181

Query: 356 IINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391
           II          + W++      Y  +   ++ +  RL  K
Sbjct: 182 IIEANNHTHPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKK 222


>gi|313497725|gb|ADR59091.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 232

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S   P   S      +A    T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|260904822|ref|ZP_05913144.1| polar amino acid ABC transporter, inner membrane subunit
           [Brevibacterium linens BL2]
          Length = 245

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 108/209 (51%), Gaps = 17/209 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT++    + V S ++ I L+L      R  + +  + L  LYI  F      T +L+ L
Sbjct: 23  LTVEIAVIVIVLSMIIAIPLALL-----RMSNIEVVRWLAQLYIEIFRC----TPLLVQL 73

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + +++  P L       G T+ P  +S  IAL+    AF+AE  RSG  +VP  Q+EA 
Sbjct: 74  -FWVYYALPTLT------GITI-PGTISAIIALTLNLTAFMAEAYRSGFQSVPPEQVEAG 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             L LT  +  R +++PQA++  +P + S  +++ K+++L   +  ADL+     I  ++
Sbjct: 126 KMLRLTRFQQIRHIIVPQALKQQLPVIMSLNISIFKDTALVSTIAVADLMFTANKISTES 185

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +A+EI+ +   +Y  ++   +L ++++ 
Sbjct: 186 YRALEILTVAALMYFIIAFPASLILSKIE 214


>gi|302521615|ref|ZP_07273957.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
 gi|302430510|gb|EFL02326.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
          Length = 244

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 1/131 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  ++P F  + +A      A+ +E+VR  L AVPR Q EAA+AL  +  +  R V+LPQ
Sbjct: 83  GYQLNPLFCGV-VAFGINYGAYGSEVVRGALNAVPRAQFEAAVALNFSPVQRMRKVILPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A   +IP  TS  + LLK + L   +   D+ +V   + ++TG      L  + IY  L+
Sbjct: 142 AWVQMIPSFTSLLIMLLKATPLLWLITAVDITAVVQQMRDRTGATAPAYLTLLVIYFVLA 201

Query: 379 IMIALFMNRLN 389
            ++ L MN L 
Sbjct: 202 YLLTLGMNALE 212


>gi|222102718|ref|YP_002539757.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221739319|gb|ACM40052.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 228

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           Y+ LS  TAA+ AEI R  ++ +P GQ EA  +LGL+ ++ T  +LLPQA R  +P +  
Sbjct: 102 YVVLSLNTAAYCAEIWRGAILGLPIGQSEAGRSLGLSKQRITVSILLPQAFRLALPAIGG 161

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q + LLK ++L  A+   + ++    +  QT +  E +L    +Y  L+ +I      + 
Sbjct: 162 QNILLLKGTALTAAITVFETMATANLVRAQTFRTYEPLLAAALVYFVLASIITSGFKYME 221

Query: 390 AKIALK 395
            ++A +
Sbjct: 222 TRLASR 227


>gi|186472111|ref|YP_001859453.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184194443|gb|ACC72407.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 218

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 7/128 (5%)

Query: 237 LIALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           ++ L  +L    P+L Q    F G    G  VSP +++  + L+ YT+A++ +I R  + 
Sbjct: 52  IVVLYVELFQGTPLLMQLFLAFFGLPLMGVDVSP-WVAATVTLTLYTSAYLVDIWRGCVE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ  A  +LG+T  +  R V+ PQA++  + P     + ++K+++L   +GF +L 
Sbjct: 111 AVPRGQWAAGASLGMTFAQQLRYVVWPQALKIAVAPTVGFLVQVVKSTALTSIIGFTELT 170

Query: 351 SVGGTIIN 358
             G  I N
Sbjct: 171 KTGTMITN 178


>gi|104781004|ref|YP_607502.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95109991|emb|CAK14696.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 235

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 14/168 (8%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI  +P LVLI     +++  L+     LG ++++    + P F +  I L     A+
Sbjct: 60  TTLIRSVPDLVLILLIFYSMQIWLNDLTEALG-WDYV---EIDP-FGAGVITLGFIYGAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R  +++VP GQ+EAA A GL+  +  RLVL PQ MR  +P L + +L LLK+++L
Sbjct: 115 FTENFRGAILSVPAGQLEAATAYGLSRAQRFRLVLFPQLMRFALPGLGNNWLVLLKSTAL 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              +G ADLV          G+    +L ++ +   + ++I    NRL
Sbjct: 175 VSIIGLADLVKAA----QNAGKTTNDVLFFLSLAGLVYLLITTLSNRL 218


>gi|229817230|ref|ZP_04447512.1| hypothetical protein BIFANG_02490 [Bifidobacterium angulatum DSM
           20098]
 gi|229785019|gb|EEP21133.1| hypothetical protein BIFANG_02490 [Bifidobacterium angulatum DSM
           20098]
          Length = 367

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F+G    SP + S+ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   
Sbjct: 135 FAFVG--LPSPAYWSVVLALIIYNGSVVAELVRSGVGNLPDGQREASLALGLTQTQSLMQ 192

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +PQA+ +++P   +Q + +LK+++L   + + DL+ 
Sbjct: 193 IEVPQAIVAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 230


>gi|167034984|ref|YP_001670215.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166861472|gb|ABY99879.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 232

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S   P   S      +A    T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|330826100|ref|YP_004389403.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|329311472|gb|AEB85887.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 221

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 30/223 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPT 234
           +T+      F+ S  +G+VL+L             GK  P+  +S        +I GLP 
Sbjct: 21  VTVQVTVLSFLLSSAIGLVLAL-------------GKLSPVRAVSVCASTVINVIRGLPI 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   + ++F  P +G    I  S      + L IA S Y A    E  R+G+ AV  
Sbjct: 68  IVQL---FYIYFVLPDIG----IQLSAFQAGVIGLGIAYSAYQA----ENFRAGIEAVDP 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA+A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   G 
Sbjct: 117 GQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLISTITVAEMTRAGQ 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I + T Q + +  +   +YL++S+ +   + RL  +     K
Sbjct: 177 LIASSTFQNMTVYTLVALLYLAMSLPLVWSLRRLERRFGAGRK 219


>gi|254381563|ref|ZP_04996927.1| polar amino acid ABC transporter [Streptomyces sp. Mg1]
 gi|194340472|gb|EDX21438.1| polar amino acid ABC transporter [Streptomyces sp. Mg1]
          Length = 314

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 10/124 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F   G+PTL+L+ L   + F  P L     + G+   P  + + IAL    AA++
Sbjct: 145 VYVDVFR--GVPTLLLVFL---VGFGLPAL----RLQGTPSQPWVLGV-IALVLSYAAYV 194

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E++R+GL +V   Q  AA ALGL  R+  R V+LPQA+R+++PPL + ++ L K+++L 
Sbjct: 195 GEVLRAGLNSVHPAQRNAARALGLGERQTLRYVVLPQAVRNVLPPLLNDFIALQKDTALV 254

Query: 342 VAVG 345
             +G
Sbjct: 255 AVLG 258


>gi|167570892|ref|ZP_02363766.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia oklahomensis C6786]
          Length = 219

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 14/211 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLVVA-IVRIGNNRILSAVAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTSAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRHVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L    IY  LS ++A    R+    AL    
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETHCALPSTH 219


>gi|229816579|ref|ZP_04446878.1| hypothetical protein COLINT_03637 [Collinsella intestinalis DSM
           13280]
 gi|229807914|gb|EEP43717.1| hypothetical protein COLINT_03637 [Collinsella intestinalis DSM
           13280]
          Length = 247

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSGL +VPRGQ EAA  LG +  +    +++PQ ++ I+P + ++ + L+K+
Sbjct: 129 AAYFAEIYRSGLQSVPRGQYEAAEVLGYSKFQTLVHIVVPQVVKRIMPAIGNEVITLVKD 188

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +SLA A+G  ++ S    ++      +  + I   IY + +  + L +  +  ++A
Sbjct: 189 TSLAFAIGVGEMFSTAKALVASQVSMVPFV-IAAAIYWAFNFAVELVLGSIEKRLA 243


>gi|167915708|ref|ZP_02502799.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 112]
          Length = 320

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|308067558|ref|YP_003869163.1| Hypothetical amino-acid ABC transporter permease protein
           [Paenibacillus polymyxa E681]
 gi|305856837|gb|ADM68625.1| Hypothetical amino-acid ABC transporter permease protein
           [Paenibacillus polymyxa E681]
          Length = 215

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 18/202 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  ++G+V+++     +R    +  + L  +Y+S  +I G P LV IA+ Y        L
Sbjct: 29  FGLIIGLVVAV-----ARLKGNRPVRWLARMYVS--IIRGTPVLVQIAVIYY------GL 75

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             +    GS  +       +ALS  T A+++E  R  ++AVP+GQ EAA A G++  +  
Sbjct: 76  DDYGISFGSLTAA-----CLALSINTGAYLSETFRGAILAVPQGQTEAAYATGMSPGQTM 130

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQA+R  I P+ + ++ +LK +SL   +G ++L+     +  Q    +  +L   
Sbjct: 131 WRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSELMRQAQLLQAQYLLYMPFLLEIG 190

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI  +  + R+  ++A
Sbjct: 191 LMYWIMSIGFSAILERVEKRLA 212



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 19/94 (20%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T ++    M    IIG +V   RL  N+ V W+ R+YV + R  P LV I  +
Sbjct: 12  LLKGAYYTLYITIVSMFFGLIIGLVVAVARLKGNRPVRWLARMYVSIIRGTPVLVQIAVI 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           Y                     L++ G+SF +LT
Sbjct: 72  YYG-------------------LDDYGISFGSLT 86


>gi|271970517|ref|YP_003344713.1| glutamine ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270513692|gb|ACZ91970.1| glutamine ABC transporter, permease protein, putative
           [Streptosporangium roseum DSM 43021]
          Length = 282

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 10/129 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL + Y   F   G+PT+++I   Y + F  P LG    + G       + + IAL+  
Sbjct: 112 RALAVAYTDVFR--GVPTILVI---YLVGFGLPALG----LQGMPTDLATLGV-IALTLS 161

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AE+ R+G+ +V   Q  AA +LGL+H +  R V++PQA R ++PPL + +++L K
Sbjct: 162 YGAYVAEVFRAGIDSVHPSQWAAARSLGLSHGRTMRYVVVPQAARRVVPPLLNDFVSLQK 221

Query: 337 NSSLAVAVG 345
           +++L   +G
Sbjct: 222 DTALVATIG 230


>gi|167743406|ref|ZP_02416180.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 14]
          Length = 316

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|27378421|ref|NP_769950.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351569|dbj|BAC48575.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 243

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 62/112 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEIVRSG +AV  GQ EAA AL L+     R V LPQA R +IPPL +   +LLK 
Sbjct: 103 AAYLAEIVRSGFMAVSAGQREAAWALSLSPWVTFRRVTLPQAFRLMIPPLGNSINSLLKA 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +SLA  +   +L+     ++ +  Q +E+       YL L+ +      RL 
Sbjct: 163 TSLASVISVEELMRRSDMLMQEHFQILEVYAAATAYYLILTSVWDAVQRRLE 214


>gi|26991170|ref|NP_746595.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148546671|ref|YP_001266773.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24986215|gb|AAN70059.1|AE016645_5 basic amino acid ABC transporter, permease protein [Pseudomonas
           putida KT2440]
 gi|148510729|gb|ABQ77589.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 232

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S   P   S      +A    T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|318057584|ref|ZP_07976307.1| putative amino acid ABC transporter permease protein [Streptomyces
           sp. SA3_actG]
 gi|318076839|ref|ZP_07984171.1| putative amino acid ABC transporter permease protein [Streptomyces
           sp. SA3_actF]
          Length = 244

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 1/131 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P F  + +A      A+ +E+VR  L AVPR Q EAA+AL  +  +  R V+LPQ
Sbjct: 83  GYQLDPLFCGV-VAFGINYGAYGSEVVRGALNAVPRAQFEAAVALNFSPVQRMRKVILPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A   +IP  TS  + LLK + L   +   D+ +V   + ++TG      L  + IY  L+
Sbjct: 142 AWVQMIPSFTSLLIMLLKATPLLWLITAVDITAVVQQMRDRTGATAPAYLTLLVIYFVLA 201

Query: 379 IMIALFMNRLN 389
            ++ L MN L 
Sbjct: 202 YLLTLGMNALE 212


>gi|297156306|gb|ADI06018.1| glutamate transporter permease [Streptomyces bingchenggensis BCW-1]
          Length = 287

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 74/134 (55%), Gaps = 7/134 (5%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L   L+ Y  + +AE+ R+G+ +V RGQ EAA +LGL   +    VL+PQ +R+++P +
Sbjct: 134 ALVAGLTLYNGSVLAEVFRAGVNSVERGQREAAYSLGLRKTQVMAYVLVPQGVRAMLPAI 193

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALF 384
            SQ +  LK++SL   + + + +  G  I       +  I + M I   Y+ + ++++ F
Sbjct: 194 ISQLVVALKDTSLGFLITYEEFLHAGKLIAGNLDYGLPFIPVVMVISPVYIGMCMLLSWF 253

Query: 385 MNRLNAKIALKEKK 398
            N     +A +E++
Sbjct: 254 AN----WVAKRERR 263



 Score = 39.7 bits (91), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           GRLS +  V W+  + VE FR +P LV+IFF++ + L V P+P
Sbjct: 92  GRLSDHGPVRWVATIVVEFFRAMPVLVMIFFIFVA-LKVQPLP 133


>gi|170691132|ref|ZP_02882298.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170144381|gb|EDT12543.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 238

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 30/218 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT---RLSRHFHEKTGKAL---PLLYISTFLIFGLPT 234
           LT+      FV S VLG++ +L +    RL R       +A+   P+L     + FGLP+
Sbjct: 21  LTLQVTLLAFVLSMVLGLLTALASASRVRLLRGIASVYIEAIRNTPVLLQIFIVFFGLPS 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L                       G T++  + +  IAL     A++AE+ R+G+ +VPR
Sbjct: 81  L-----------------------GITLN-AYTAGVIALGVNVGAYLAEVFRAGIQSVPR 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA  LGL   +    V+LPQA R++ P + +  + LL  +SL  A+   +L     
Sbjct: 117 GQLEAASILGLERSQIFMEVVLPQAARAVYPAIVNNLIQLLLGTSLLSAIALPELSGTAT 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I  +T   I+   I +  YL LS +++    ++  ++
Sbjct: 177 VINARTLLYIQTFTITLIAYLFLSNVLSWVAGQIGVRV 214


>gi|170721982|ref|YP_001749670.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169759985|gb|ACA73301.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 239

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 95/184 (51%), Gaps = 23/184 (12%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLP---TLVLIALKYQLHFDKPV 250
           LG+V++L A         ++ K LP  + +TF  +  GLP   TL++I    Q+   + +
Sbjct: 40  LGLVVALAA---------RSRKRLPRAWSTTFSTVFRGLPELLTLLIIYYGCQIAAQQ-L 89

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L    + G   ++  F++  IA S   AAF +EI  +    +P+GQ+EA  ALGL  R A
Sbjct: 90  LAAMGYQGEFLIN-TFLAAMIAFSLVFAAFSSEIWLAAFKTLPKGQLEACAALGLGKRTA 148

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V+LPQ  R  +P L++ +L+LLK++SL   +   DL       + QT  A+ +    
Sbjct: 149 FFKVVLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDL-------MRQTNLAVSVTKEP 201

Query: 371 MFIY 374
           MF Y
Sbjct: 202 MFFY 205


>gi|319780313|ref|YP_004139789.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166201|gb|ADV09739.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 215

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 68/125 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A++AEI RSG+ A+P GQ +A  +LGL + +  RL++LPQA      P    
Sbjct: 91  LGLTFFASAYLAEIWRSGVAALPLGQWDAGASLGLHYLQELRLIILPQAFSITRAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K+++L   +GF +LV     I N T +  ++  +   I+  +   +  +  RL  
Sbjct: 151 LVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKVYGLVALIFFVMCFPLTQYARRLEK 210

Query: 391 KIALK 395
           + A +
Sbjct: 211 QAAAR 215


>gi|260891039|ref|ZP_05902302.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
 gi|260859066|gb|EEX73566.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
          Length = 225

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 34/215 (15%)

Query: 191 VFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           VFS + G++L +  T  ++       F+ ++ + +PLL     + FG      +A  + L
Sbjct: 34  VFSILFGLILGIVMTSKNKIIYGILKFYLESMRIIPLLVWLFIIYFG------VAKGFDL 87

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H D                    +  I    +  A + +IVR  +I++P+ Q E+A ALG
Sbjct: 88  HIDSET-----------------TTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  R VLLPQA+R I P   +    ++K +SLA+ +  A+++ +G  II  + +  
Sbjct: 131 LDTSQVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKN 190

Query: 365 EIILIWM-----FIYLSLSIMIALFMNRLNAKIAL 394
            +   W+     F+Y  +   I L   ++  K A+
Sbjct: 191 PMAPFWVYLFIFFLYFIICYPITLLSKKMEKKWAI 225


>gi|317488403|ref|ZP_07946956.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
 gi|316912447|gb|EFV34003.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
          Length = 324

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 51/70 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+  Y   +I+E+VRSG+ ++ RGQ EAA + G ++ ++  +++LPQA+R I+PPL  Q
Sbjct: 98  LAIGIYHGGYISEVVRSGIGSIHRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQ 157

Query: 331 YLNLLKNSSL 340
             NL+KN+S+
Sbjct: 158 AANLVKNTSV 167


>gi|226200044|ref|ZP_03795593.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|225927896|gb|EEH23934.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei Pakistan 9]
          Length = 582

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 110 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 167

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 168 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 227

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 228 LSIVQAQVERRYARGAVREPE 248


>gi|260588159|ref|ZP_05854072.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Blautia hansenii DSM 20583]
 gi|331082275|ref|ZP_08331402.1| hypothetical protein HMPREF0992_00326 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541686|gb|EEX22255.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Blautia hansenii DSM 20583]
 gi|330403069|gb|EGG82634.1| hypothetical protein HMPREF0992_00326 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 236

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 76/122 (62%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+RSG+ +V  GQ+EA  A+GL+   +   +++PQA+++I+P L +++++L+K
Sbjct: 114 SGAYISEIMRSGIQSVDAGQLEAGRAVGLSFSVSMVKIVIPQAVKNILPTLGNEFISLIK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG ADL      I + + + +   L+   IY+ L ++I+L +  L   +   +
Sbjct: 174 ETSIVSFVGAADLYVAFSYIGSNSYEFMVPYLVMALIYIVLVLIISLLVKLLERSLKKSD 233

Query: 397 KK 398
           ++
Sbjct: 234 RR 235



 Score = 39.7 bits (91), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRVYVEVFRNIPPLV 143
           ++ G  NT  +A  G+I   +IGTL+   R+        +++  IC  YV +FR  P +V
Sbjct: 24  VIEGLQNTLMIAIVGLIVGILIGTLIATVRVLPKYKRLPRILNGICSFYVALFRGTPMVV 83

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
            +   Y  +L ++ I     V+   +F  N G
Sbjct: 84  QLLVFYYVLLPIMGIRTSGEVVAMAVFGLNSG 115


>gi|328463948|gb|EGF35458.1| amino acid ABC transporter, permease protein [Lactobacillus
           helveticus MTCC 5463]
          Length = 215

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 1/132 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P + +  +A     AA+ AEI R G  ++  GQ EAA  L L+  +    +++PQ ++
Sbjct: 82  VFPRYQAALLAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLHLSRWQTMTKIVIPQVIK 141

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P + ++ +NL+K+SSL   +G  DL+  G   + +    + ++L+ + IYL L  + 
Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLLLISIC 200

Query: 382 ALFMNRLNAKIA 393
           A  + +L   ++
Sbjct: 201 AFVLKKLEKHVS 212


>gi|222153141|ref|YP_002562318.1| amino acid ABC transporter permease [Streptococcus uberis 0140J]
 gi|222113954|emb|CAR42213.1| putative amino acid ABC transporter permease protein [Streptococcus
           uberis 0140J]
          Length = 213

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 55/91 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L LT  +  + ++LPQ  + ++P + ++
Sbjct: 89  LAFTMNYAAYFAEIFRGGIEAIPKGQYEAAKVLKLTPFQTIQHIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|310830296|ref|YP_003965396.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753202|gb|ADO44345.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 218

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 61/115 (53%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A++ EI R  + AVP+GQ EAA AL L++    R V+LPQAMR    P     + L+K 
Sbjct: 98  SAYLGEIWRGAIEAVPQGQSEAATALSLSYPDRMRHVILPQAMRVATAPTVGFLVQLIKG 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +GF +L   G  + N T Q   +      +Y  L   ++L    + A++
Sbjct: 158 TSLASIIGFTELTRAGQIVNNATFQPFLVFGTVAALYFILCWPLSLLARHMEARM 212


>gi|110635477|ref|YP_675685.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110286461|gb|ABG64520.1| amino acid ABC transporter membrane protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 295

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 115/218 (52%), Gaps = 16/218 (7%)

Query: 176 LSFPTLTMD--TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG---KALPLLYISTFLIF 230
           LSFP +      N  IFV + +  +V  L    ++R    KT    +A+  LY   F   
Sbjct: 78  LSFPLILKAFWVNIYIFVVAEICVLVWGLIVA-VARLIPGKTAAPIRAIATLYTDIFR-- 134

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P ++ I   Y + F  P+ G         +S E  ++ IAL+    A++AE+ R+G+ 
Sbjct: 135 GMPAIITI---YLIGFGLPLSGLPIL---KDLSVETYAI-IALTLTFGAYVAEVYRAGIE 187

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++   Q+ AA +LGLT+ +  R V++PQA+R I+PPL + ++ L K+++L   +G  D  
Sbjct: 188 SIHWSQVAAARSLGLTYMQTMRYVIVPQAVRRIVPPLLNDFIGLQKDTALVNVIGSIDAF 247

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +    I++     +  + +  F+++ ++I  A F++R+
Sbjct: 248 N-QAKILSSNYFNLSPVTVVAFLFVVITIPQARFVDRI 284


>gi|300716668|ref|YP_003741471.1| Putative ABC transporter, permease [Erwinia billingiae Eb661]
 gi|299062504|emb|CAX59621.1| Putative ABC transporter, permease [Erwinia billingiae Eb661]
          Length = 306

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 75/129 (58%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+   AA+ AEI+R G + V  GQ EAA ALGL+  + T  ++LPQA+R+II
Sbjct: 144 QFPAAIIGLTLVQAAYSAEIIRGGFLGVDFGQHEAASALGLSAFRRTFRIILPQALRAII 203

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+  + I ++++    YL ++ ++++ 
Sbjct: 204 PTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYLIITTVLSVI 263

Query: 385 MNRLNAKIA 393
            + + + +A
Sbjct: 264 QHNVESWLA 272


>gi|289705233|ref|ZP_06501632.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289557983|gb|EFD51275.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 226

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 48/74 (64%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   IALS Y AAF+ E +RSG+  VP GQ EAA ++GL    A R V+LPQA+R  I 
Sbjct: 95  FIYAVIALSLYHAAFMCEAIRSGVNTVPLGQAEAARSIGLGFLPAARHVILPQALRGAIT 154

Query: 326 PLTSQYLNLLKNSS 339
           PL +  + L KN++
Sbjct: 155 PLGNTVIALTKNTT 168


>gi|118587044|ref|ZP_01544475.1| ABC-type amino acid transport system, permease [Oenococcus oeni
           ATCC BAA-1163]
 gi|290890987|ref|ZP_06554051.1| hypothetical protein AWRIB429_1441 [Oenococcus oeni AWRIB429]
 gi|118432565|gb|EAV39300.1| ABC-type amino acid transport system, permease [Oenococcus oeni
           ATCC BAA-1163]
 gi|290479386|gb|EFD88046.1| hypothetical protein AWRIB429_1441 [Oenococcus oeni AWRIB429]
          Length = 231

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 78/137 (56%), Gaps = 3/137 (2%)

Query: 259 GSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           GS++    P   +  IA++  ++A+++E +R+G  ++ +GQ EAA +LGL  +   R V+
Sbjct: 92  GSSIEINIPTIPAGIIAVAINSSAYVSEAIRAGFNSIDKGQTEAARSLGLPKKLTMRYVI 151

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQA+++I P L ++++ L+K SS+ + +G  D++     I   T + +  +++   IY 
Sbjct: 152 IPQALKNIWPALGNEFVALIKESSIVLVIGTPDIMYQINNIRAVTFEPVAPLILSAVIYF 211

Query: 376 SLSIMIALFMNRLNAKI 392
            L+  +   M     K+
Sbjct: 212 VLTFGLTRIMKHFEGKM 228


>gi|12831454|gb|AAK08609.1| GtpD [Agrobacterium tumefaciens]
          Length = 240

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 62/102 (60%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G +++P F S  +++S +  A  A I+R+GL++VP GQ EAA++ GL   K   LV+LPQ
Sbjct: 77  GLSLNP-FWSSALSVSVWGGANGAHIIRAGLLSVPIGQREAALSSGLRSWKGLLLVVLPQ 135

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           AM  I+PP  S    L++ SSL   +G  +L+     +I QT
Sbjct: 136 AMPIILPPYVSLVTGLVQASSLGSVLGVNELLRSAQILIEQT 177


>gi|167815880|ref|ZP_02447560.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
          Length = 262

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A +ALGLT  +  R VLLPQA+R +
Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIM 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204


>gi|317486177|ref|ZP_07945016.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316922568|gb|EFV43815.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 224

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 21/222 (9%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           NRGL      +  +A I    FVLG++     T ++R F  K  ++L   + + F   G+
Sbjct: 18  NRGLVMSIALIVPSATI---GFVLGVL-----TGVARVFGPKWLRSLGNGFTTIFR--GV 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V + +   L+F  P LG +       + P   S+   + C T A+ +E VR  L+++
Sbjct: 68  PLVVQLMI---LYFGLPNLGIY-------LEPYPASVLGFILC-TGAYQSEYVRGALLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ++AA ALG T  +    V++PQA R  +P   ++ + L+K SSLA  +   +L   
Sbjct: 117 RQGQIKAAYALGFTKLQTILWVVIPQAARRALPGCGNEIIYLIKYSSLAYIITCIELTGE 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +++++ +  E+ ++    YL L      F+ +L  K A+
Sbjct: 177 AKVLVSRSFRPTEVYIVAGIYYLVLVSFATWFLQKLERKFAI 218


>gi|291550028|emb|CBL26290.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus torques L2-14]
          Length = 228

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 10/179 (5%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           PL YI+  +++   G P ++ + + Y  +F   VLG  N I G   S  F++  +A    
Sbjct: 50  PLSYITNIIVWIVRGTPLMIQMLIIY--YFPGLVLG--NPIWGGGESGRFLAASVAFIFN 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            A + + I R G+  +P+GQ EA + LG+T  +    V L Q ++ I+PP++++ + L+K
Sbjct: 106 YACYFSVIYRGGIQGIPQGQTEAGLVLGMTKHQIFFKVKLLQMVKRIVPPMSNEIITLVK 165

Query: 337 NSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SLA  +   +++  G   +  +     AI  +    F YL  + ++ + + +L  K+
Sbjct: 166 DTSLARIIALQEIIWAGQAFLKGSQGISGAIWPMFFTAFYYLIFNGILTVLLGKLEKKL 224


>gi|317049370|ref|YP_004117018.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950987|gb|ADU70462.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 221

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 24/151 (15%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           ALPLL +   L F LP       +Y +    PV+G                  +AL+ Y 
Sbjct: 62  ALPLLVVIYLLYFVLP-------EYDITLSSPVVG-----------------VLALTLYY 97

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A +IA+++R+ + A+P+GQ EA   LGL+  +  R V+LPQ +  ++ PL    + L+K+
Sbjct: 98  APYIAQVIRAAIGALPKGQWEACRVLGLSRSEQLRDVVLPQTLPQMLSPLVGLTIGLIKD 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           S+L   V   + +      I+ T   +EI L
Sbjct: 158 SALLSIVSVQEFMYAAKQAISATYAPLEIYL 188


>gi|227431661|ref|ZP_03913695.1| amino acid ABC superfamily ATP binding cassette transporter,
           pemease component [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352582|gb|EEJ42774.1| amino acid ABC superfamily ATP binding cassette transporter,
           pemease component [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 186

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 55/81 (67%), Gaps = 4/81 (4%)

Query: 268 SLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           +LYIA    LS   AA+IAE  RSG+ ++  GQ EA+  LGL+     R +++PQA++ +
Sbjct: 87  NLYIAGALSLSLNAAAYIAETFRSGIQSISEGQREASRTLGLSQFDTMRFIIVPQAIKIV 146

Query: 324 IPPLTSQYLNLLKNSSLAVAV 344
           IP L +++++L+K+SSL  A+
Sbjct: 147 IPALGNEFISLIKDSSLVSAI 167



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA   + G + T   +  G++  TI G ++  GR+S N +++ I + Y+ +FR  P  V
Sbjct: 10  DYAPFFMHGLLYTLLFSLCGVVFGTIFGLIIALGRMSKNPVISGIFKTYIGLFRGTPLFV 69

Query: 144 VI 145
            I
Sbjct: 70  QI 71


>gi|259909459|ref|YP_002649815.1| Putative amino-acid transport system permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|224965081|emb|CAX56613.1| Putative amino-acid transport system permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|283479532|emb|CAY75448.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 227

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 74/128 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ L++VP+GQ EAA ++G++  +  R +++PQA R  +P
Sbjct: 89  FPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEAAHSIGMSWGQTLRRIVMPQAARVAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ ++ L+K++SLA  +   +L      I   T Q + +      IYL LS +++   
Sbjct: 149 PLSNTFIALVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAAIIYLLLSSVLSALQ 208

Query: 386 NRLNAKIA 393
            RL  K+A
Sbjct: 209 ARLEKKLA 216


>gi|218515610|ref|ZP_03512450.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli 8C-3]
          Length = 169

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 68/106 (64%), Gaps = 10/106 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+LI   Y   F  P+L       G+ V P F+++   L  Y +AF++E+VR+G++
Sbjct: 74  GVPLLMLILWSY---FLVPLLT------GADV-PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           A+  GQM+AA ALG ++  A R ++LPQA+ ++IP + S +++ +K
Sbjct: 124 ALGSGQMDAARALGHSYIGAMRYIILPQALYNMIPSILSTFVSTIK 169


>gi|187477188|ref|YP_785212.1| amino acid ABC transporter permease [Bordetella avium 197N]
 gi|115421774|emb|CAJ48285.1| amino acid ABC transporter, permease protein [Bordetella avium
           197N]
          Length = 225

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 64/103 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+  +I+LS   AA+  E V +G+ ++P GQMEAA + GL+  +A R V+LPQA+R  +P
Sbjct: 97  FLVTWISLSLVLAAYAEESVWAGIASLPPGQMEAARSSGLSWWQAMRWVILPQAVRRAVP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            LT++ +++ KN++L   V   +L++      + +G    +++
Sbjct: 157 TLTNRIISITKNTALGSVVSLHELLNAAQGASSLSGNPTPLMM 199


>gi|307299985|ref|ZP_07579770.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti BL225C]
 gi|306904874|gb|EFN35457.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti BL225C]
          Length = 220

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 73/135 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I L  +   + AE+ R+G+  VPRGQ EAA A  LT R+    V+LPQA+  +
Sbjct: 86  PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L +  + + K + L  A+   +L++   +I N   + IE + +    +L +S++   
Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVF 205

Query: 384 FMNRLNAKIALKEKK 398
           F+  L A+ +  E++
Sbjct: 206 FLRWLEARYSRVEER 220


>gi|157964196|ref|YP_001499020.1| amino acid ABC transporter permease [Rickettsia massiliae MTU5]
 gi|157843972|gb|ABV84473.1| Amino acid ABC transporter permease protein [Rickettsia massiliae
           MTU5]
          Length = 218

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F  V+G++L++       A RL  +F+    +  PLL   + + F  P +  I +K+ +
Sbjct: 31  IFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSIIYFASPYI--IGVKFSV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                FM+  I+ S  + A+++E++R+G+  V +GQ EAA AL 
Sbjct: 89  ---------------------FMAGAISFSLNSGAYVSEVIRAGINTVDKGQFEAAEALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +     T+ ++LPQA+++I P L ++ +NL+K S++   +G  DL+
Sbjct: 128 IPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173


>gi|116618335|ref|YP_818706.1| ABC-type amino acid transport system, pemease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116097182|gb|ABJ62333.1| amino acid ABC transporter membrane protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 219

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 52/74 (70%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++LS   AA+IAE  RSG+ ++  GQ EAA  LGL+     R +++PQA++ +IP L ++
Sbjct: 94  LSLSLNAAAYIAETFRSGIQSISEGQREAARTLGLSQFDTMRFIIVPQAIKIVIPALGNE 153

Query: 331 YLNLLKNSSLAVAV 344
           +++L+K+SSL  A+
Sbjct: 154 FISLIKDSSLVSAI 167



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA   + G + T   +  G++  TI G ++  GR+S N +++ I + Y+ +FR  P  V
Sbjct: 10  DYAPFFMHGLLYTLLFSLCGVVFGTIFGLIIALGRMSKNPVISGIFKTYIGLFRGTPLFV 69

Query: 144 VI 145
            I
Sbjct: 70  QI 71


>gi|329118223|ref|ZP_08246933.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465644|gb|EGF11919.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 239

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 16/156 (10%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKY-----------QLHFDKPVLGQFNFI-----GGSTV 262
           L L  I+  L+FGL   V+ A K            +L  + P+L Q  F+          
Sbjct: 43  LSLYGIALSLLFGLAVAVVTAYKIRPLYAPARAYIELSRNTPLLIQLFFLYYGLPKAGIK 102

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F    IAL+   A+++AE +R+G++AVP+GQ+EA  A+GL+  +  R V LPQA   
Sbjct: 103 WDGFTCGVIALAFLGASYMAEALRAGILAVPQGQIEAGKAVGLSRWQVFRYVELPQAWAV 162

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +P + +  L L+K +S+  AVG A+L+ V   II 
Sbjct: 163 ALPAVGANVLFLIKETSVVSAVGVAELLFVTKDIIG 198


>gi|311108045|ref|YP_003980898.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 17 [Achromobacter
           xylosoxidans A8]
 gi|310762734|gb|ADP18183.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 17
           [Achromobacter xylosoxidans A8]
          Length = 216

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G+P L L+   Y   F  PV     F+G     P   ++ +A   YTAAF+ +I   
Sbjct: 58  LVQGVPLLGLLMFFY---FGMPV-----FLGIEV--PALTAVSVAFIIYTAAFLGQIWYG 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV   Q EAA  LGL+     R V+ PQA R  +PP     + L+K +SLA  VGF 
Sbjct: 108 GIQAVKHEQWEAAACLGLSKWHQFRHVIAPQAFRLSLPPTVGFLVQLIKGTSLASVVGFV 167

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   G      T Q + +      +Y +  + + ++   L  +
Sbjct: 168 ELARAGQIASAATFQPLLVYSCVALLYFAACLPLTMWARNLEGR 211


>gi|292492726|ref|YP_003528165.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Nitrosococcus halophilus Nc4]
 gi|291581321|gb|ADE15778.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Nitrosococcus halophilus Nc4]
          Length = 217

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 85/151 (56%), Gaps = 5/151 (3%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           QL+F   VL +F    G T+SP F++  + L  + + + +E+ R+G+  VP GQ EAAIA
Sbjct: 70  QLYFLFFVLPEF----GVTLSP-FLTGVVGLGLHYSTYTSEVYRAGIEGVPEGQWEAAIA 124

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L ++     + ++LPQA+  +IP L +  + + K++ L  A+   +L+        +T +
Sbjct: 125 LNMSRFHIWKAIILPQAIPPVIPALGNYLIAMFKDTPLLAAITVMELLQTAKLSGAETFR 184

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +E + +   ++L +S++ +  + +L A+ A
Sbjct: 185 YLEPLTLVGLLFLVISLLSSRLIRKLEARFA 215



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 11/108 (10%)

Query: 82  DSSYATAILVGFVNTFWLA----FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D  YA  IL   +  FW+     F GM  A I+G      R SA +++A I    VE  R
Sbjct: 4   DWQYALDILPDLLRGFWVTIQATFWGMTAALILGLAWAILRRSAIRIMATITAWVVEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVL-PFGMFLNNRGLSFPTLTMD 184
           + P LV ++FL+        +P+  + L PF   +   GL + T T +
Sbjct: 64  STPLLVQLYFLF------FVLPEFGVTLSPFLTGVVGLGLHYSTYTSE 105


>gi|13470759|ref|NP_102328.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
 gi|14021502|dbj|BAB48114.1| probable permease of ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 239

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 14/176 (7%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-P 264
           RL+ + +    + LP L       FG+P L    L++ + + +P          +T+   
Sbjct: 58  RLAANIYTTVFRGLPELVTLFLFFFGMPIL----LQHLIRYFRP---------EATIDVN 104

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F++  I LS   +++ +E+  S   A+P+GQ E   ++GL+  +  RLV+LPQ +R   
Sbjct: 105 SFVAGMIVLSLIFSSYASEVFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLLRIAF 164

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           P L + +L+LLK++SL   VG A+ +   G     T  +     I   ++L L+++
Sbjct: 165 PGLENCWLSLLKDTSLVSVVGLAETLRNAGVAARVTKHSFLFYSIAALVFLGLAVV 220


>gi|331697743|ref|YP_004333982.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
 gi|326952432|gb|AEA26129.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
          Length = 299

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 57/85 (67%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + SL + L  Y  + +AE+ R+G+ A+PRGQ EAA ALGL   +    VLLPQ++R+++P
Sbjct: 136 YWSLVLGLMLYNGSVLAEVFRAGVRALPRGQSEAAYALGLRKTQVMTNVLLPQSLRAMLP 195

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            + SQ + +LK+++L   + + +L+
Sbjct: 196 TIVSQLVVVLKDTALGFIILYPELL 220


>gi|324991488|gb|EGC23421.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAVIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|312962619|ref|ZP_07777109.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311283199|gb|EFQ61790.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 232

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPLLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGAFYLCLTFILVRLF 216


>gi|167908583|ref|ZP_02495788.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia pseudomallei NCTC 13177]
          Length = 340

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 181 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 238

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 239 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 298

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 299 LSIVQAQVERRYARGAVREPE 319


>gi|302537787|ref|ZP_07290129.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
 gi|302446682|gb|EFL18498.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
          Length = 292

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 30/220 (13%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+   A   V S VLG VL+    RLS H   +    L + +     +  +   + +ALK
Sbjct: 79  TLKAFAYASVLSLVLGAVLA--TGRLSVHRPVRWAATLCVEFFRAMPVLVMIFFIFVALK 136

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
            Q                        +L   L+ Y  + +AE+ R+G+ AV +GQ EAA 
Sbjct: 137 VQ---------------------PLPALVAGLTLYNGSVLAEVFRTGVNAVEKGQREAAY 175

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALG+   +    VL PQA+R+++P + SQ +  LK++SL   + + + +  G  I +   
Sbjct: 176 ALGMRKTQVMTFVLAPQAVRAMLPTIISQLVVALKDTSLGFLITYEEFLHAGKLIASNLD 235

Query: 362 QA---IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                I +++I   IY+ + ++++ F       +A +E++
Sbjct: 236 YDLPFIPVVMIISPIYIGMCMLLSWFAT----WVARRERR 271



 Score = 43.9 bits (102), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 70  FEIDQGIVPYTSDSSYA---TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           F+ DQ      S   Y      +L G  NT        + + ++G ++  GRLS ++ V 
Sbjct: 50  FDTDQFTAAKWSPFEYEGIQELLLKGLGNTLKAFAYASVLSLVLGAVLATGRLSVHRPVR 109

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           W   + VE FR +P LV+IFF++ + L V P+P
Sbjct: 110 WAATLCVEFFRAMPVLVMIFFIFVA-LKVQPLP 141


>gi|227877754|ref|ZP_03995788.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus crispatus JV-V01]
 gi|256843607|ref|ZP_05549095.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256850083|ref|ZP_05555513.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|312984336|ref|ZP_07791678.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus CTV-05]
 gi|227862657|gb|EEJ70142.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus crispatus JV-V01]
 gi|256615027|gb|EEU20228.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256713055|gb|EEU28046.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|310894261|gb|EFQ43341.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus CTV-05]
          Length = 223

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 90/180 (50%), Gaps = 27/180 (15%)

Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           LY+  F I  +PT+VL+ L Y      LH + P                +M++ +A S +
Sbjct: 60  LYLEFFRI--VPTVVLLYLVYYILPRSLHVNWPA--------------TWMAV-LAFSMW 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA  ++IVR  L +VP+ Q E+ +ALGL   +  R VLLPQA++  +P   +    ++K
Sbjct: 103 VAAEFSDIVRGALESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIK 162

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391
            +SL + +   ++++VG  II    Q     + W++     +Y  L   ++ +  RL AK
Sbjct: 163 TTSLLMIINIMEVINVGQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 222



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 38/68 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S    ++ G   + W+A   +I    +GT+ G  R   N+ + ++ R+Y+E FR +P 
Sbjct: 11  EGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPT 70

Query: 142 LVVIFFLY 149
           +V+++ +Y
Sbjct: 71  VVLLYLVY 78


>gi|330958424|gb|EGH58684.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 216

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 60/121 (49%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ ++P L + 
Sbjct: 93  IGLGCYYAAYIAEACRGAIEDIPAGQWEAARALDFDRGDTWRRIILPQALKPMLPVLGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K + L   +   +L      I   T +  E   +   ++L++S+  +L  N L  
Sbjct: 153 LIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFNYLER 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|323126802|gb|ADX24099.1| hypothetical protein SDE12394_02845 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 215

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV  GQ EA ++ G TH +   L++ PQA R ++P + SQ+
Sbjct: 87  AFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFTHFQVFCLIIFPQAFRKMLPAIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 147 VTVIKDTSLLYSV 159


>gi|160941548|ref|ZP_02088880.1| hypothetical protein CLOBOL_06446 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435513|gb|EDP13280.1| hypothetical protein CLOBOL_06446 [Clostridium bolteae ATCC
           BAA-613]
          Length = 234

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 76/126 (60%), Gaps = 8/126 (6%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ +EI+R+ ++++P+GQ EAA++LG+++ +    ++LPQA +  +PPL + ++ L+K+
Sbjct: 102 GAYSSEIIRAAILSIPKGQWEAAMSLGMSYPQQLLRIILPQAFKISVPPLFNSFIALVKD 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSLSIMIALFMNRLNAKIAL 394
           +SLA  +   ++      I   T +  E +L+++   FIYL    ++    NR+  K+ L
Sbjct: 162 TSLAANITIPEMFLTTQRI---TARNYEPLLMYIEVGFIYLIFCTVLNYVQNRIENKLML 218

Query: 395 --KEKK 398
              +KK
Sbjct: 219 TPTDKK 224


>gi|52425331|ref|YP_088468.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307383|gb|AAU37883.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 238

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 18/159 (11%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS  +I G P LV I++ +   +  P LG F       + P   +  I  S    A+ 
Sbjct: 75  VYIS--IIRGTPMLVQISVVF---YGLPALGIF-------IDP-IPAAIIGFSLNIGAYA 121

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E VR+ + +VP+GQ EA   +G+++ +  R ++ PQA R  +PPL++ ++ L K++SLA
Sbjct: 122 SETVRAAISSVPKGQWEAGYTIGMSYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLA 181

Query: 342 VAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYL 375
             V   ++  V   + N +   + I     ++ W F ++
Sbjct: 182 SVVTVTEMFRVAQQMANMSYDFLPIYIEAGLIYWCFCWV 220


>gi|327478629|gb|AEA81939.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 65/123 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+ AE++R  + +V RGQ EA  AL +T     R ++LPQA+ + IPP T+ 
Sbjct: 88  VGLGLNIGAYGAEVLRGAIRSVHRGQHEACHALNMTPLTRMRRIILPQALLAAIPPGTNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  +DL      +   T   +EI  + + IY  L+  I   M RL  
Sbjct: 148 LIELLKNTSLVSLITLSDLAFRARQLDQATLMTLEIFGLALVIYFVLAQTINFAMRRLEQ 207

Query: 391 KIA 393
           ++A
Sbjct: 208 RLA 210


>gi|241764989|ref|ZP_04762986.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241365423|gb|EER60210.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 266

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 13/160 (8%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGL 289
           G PTL+LI + +       VL Q     G  +S  +M +L + LS  TAA +AE+ R+G+
Sbjct: 115 GTPTLLLIYVCFL------VLPQ----AGIKLSTYWMLTLPVGLS--TAAVVAEVYRAGV 162

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVPRGQ  AA +LGLT  +    ++ PQA+R I+P L +Q + ++K+++    V + +L
Sbjct: 163 LAVPRGQTNAARSLGLTEAQVFFHIVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGEL 222

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +     II      + + L+   +Y  ++  I+    R+ 
Sbjct: 223 MQNAKVIIANYHALVPVYLVVAALYCLVNYAISRASKRIG 262


>gi|217422535|ref|ZP_03454038.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 576]
 gi|217394766|gb|EEC34785.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 576]
          Length = 617

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|149191816|ref|ZP_01870053.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148834334|gb|EDL51334.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 246

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 30/231 (12%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           ++ + S +L + L +    L++    K  +A+  LY  T +I G+P LVL+ L +   Q+
Sbjct: 20  EVAILSLLLAMFLGMLGA-LAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFGGQI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287
             +  +     ++    +S +       ++  YI +S + A          A++AE  R 
Sbjct: 77  LLNNSLYAVNEWLNNWFMSSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRG 136

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++AV +G+MEAA A G++   A R +LLPQ +R  +P   + +L LLK ++L   +G  
Sbjct: 137 AIMAVDKGEMEAAKAYGMSSVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           D+V V       T             Y+S++I+  LF +     + L E+K
Sbjct: 197 DMVRVSSLAAGSTKMPFT-------FYMSVAIIFLLFTSISTGFLKLVERK 240


>gi|139439229|ref|ZP_01772671.1| Hypothetical protein COLAER_01685 [Collinsella aerofaciens ATCC
           25986]
 gi|133775253|gb|EBA39073.1| Hypothetical protein COLAER_01685 [Collinsella aerofaciens ATCC
           25986]
          Length = 217

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 72/123 (58%), Gaps = 6/123 (4%)

Query: 256 FIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           ++ G +++P+  + +  +A     A + AEI RSGL ++PRGQ EAA  LG +  +    
Sbjct: 75  YVFGISLTPDSKWTACVVAFIINYAGYFAEIYRSGLQSIPRGQYEAAEVLGYSRVQTFLY 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-NQTGQ---AIEIILI 369
           +++PQ  + I+P + ++ + L+K++SLA A+G  ++ S    ++ +Q      AI  ++ 
Sbjct: 135 IVMPQVAKRILPAMGNEIITLVKDTSLAFAIGVGEMFSTAKALVASQVSMVPFAIAALIY 194

Query: 370 WMF 372
           W+F
Sbjct: 195 WVF 197


>gi|113868712|ref|YP_727201.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527488|emb|CAJ93833.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 227

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 30/195 (15%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           LT+  +    VF FVLG  L++  T      R     +    +  PL+  + +L FGL  
Sbjct: 23  LTLRMSVATIVFGFVLGTALAVVRTQGPAWARRCVTVYVDVIRNTPLVIQAFWLFFGLAA 82

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +                            P   +  +AL    +A+  EIVR+G+ +VPR
Sbjct: 83  V------------------------QVRVPAMAAAVVALVVNVSAYTTEIVRAGIESVPR 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA  LGL+  +  RLV+LPQA+  + P L SQ++ ++  +S+   +   +L +VG 
Sbjct: 119 GQLEAASCLGLSRWQMLRLVVLPQAVERMYPALISQFVLMMLATSIMSQISAEELTAVGY 178

Query: 355 TIINQTGQAIEIILI 369
            I ++T +  EI L+
Sbjct: 179 RIQSETFRGFEIYLV 193


>gi|73661927|ref|YP_300708.1| ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494442|dbj|BAE17763.1| ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 232

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 92/174 (52%), Gaps = 13/174 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++ PL+     + +GLP  +L   ++ Q H +  +            SP  ++ +I  S 
Sbjct: 59  RSTPLIVQLFIVYYGLPAFILFLNEHLQWHINPDIF-----------SPLIIA-FIVFSL 106

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A+++E ++SGL +V   Q+EAA ++GLT     + ++LPQA    +P + +Q++ L+
Sbjct: 107 HAVAYLSESIKSGLQSVDYEQIEAAQSVGLTRFHIYKEIVLPQAFAYALPNIENQFIMLI 166

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           K +SLA AV   ++++V   I N+  + I +  +    Y  L++++    N++ 
Sbjct: 167 KGTSLAFAVQVTEIMAVSHIIANEGYRFITVYTVAAMFYWLLAMILEYIFNKME 220


>gi|323528627|ref|YP_004230779.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Burkholderia
           sp. CCGE1001]
 gi|323385629|gb|ADX57719.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. CCGE1001]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 67/123 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ +EI+R  L +VP GQ EAA+AL L+     R ++LPQAM + +PP T+ 
Sbjct: 88  VGLGLHYGAYGSEILRGALRSVPGGQFEAALALNLSPLTRMRRIVLPQAMINALPPATNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +SL   +  +DL      +   T +  EI ++ + IY  L+ ++   M     
Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDEATFRTAEIFMLTLVIYFVLAQVLVAVMRHFER 207

Query: 391 KIA 393
           +++
Sbjct: 208 RVS 210


>gi|291548167|emb|CBL21275.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus sp. SR1/5]
          Length = 211

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 80/136 (58%), Gaps = 3/136 (2%)

Query: 256 FIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FI G  +S  +  ++++IA +   AA+ AEI R G+ ++P GQ EAA  LG    +    
Sbjct: 70  FIFGIRISMGYSLIAVFIAFAINYAAYFAEIYRGGIESMPVGQYEAAKILGYNKVQTFFR 129

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ ++ I+P +T++ + L+K++SLA  V  A++ ++   I +     +  ++  +F 
Sbjct: 130 IILPQVIKRILPSITNEVITLVKDTSLAFVVAVAEMFTIAKQIASAQTTMMPFVIAAIFY 189

Query: 374 YLSLSIMIALFMNRLN 389
           Y+  ++++A+ M ++ 
Sbjct: 190 YV-FNLIVAVVMQKVE 204


>gi|270292047|ref|ZP_06198262.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279575|gb|EFA25417.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 230

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 55/82 (67%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A +AE+ ++   A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++
Sbjct: 109 SAIVAEVFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRD 168

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           ++LA  +GF D++  G  +I++
Sbjct: 169 AALAYTIGFVDVMGAGNLLISR 190


>gi|167840667|ref|ZP_02467351.1| ABC transporter, inner-membrane component [Burkholderia
           thailandensis MSMB43]
          Length = 220

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 71/119 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F++  I LS  T A+ ++I+ +G  A+  GQ+EAA+   LT R+    + +PQ MR+ 
Sbjct: 88  PGFVAAAIGLSLNTGAYQSQILGAGFRAIAPGQIEAALTFNLTRRQVLWHIEVPQVMRAT 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +P L S+ ++++K S++   +   DL+ VG  + + + + +E+  +    YL+++ ++A
Sbjct: 148 LPALVSEMIDIVKASAVVSVISVTDLMRVGQQLSSSSYRPLEVYSLAAVFYLAITSLLA 206


>gi|113866799|ref|YP_725288.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525575|emb|CAJ91920.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 18/209 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            VF  +LG V++L         H +  KA    Y+S  ++ G P LV I   + +++  P
Sbjct: 29  MVFGLMLGTVVALMGIS-----HSRVLKAAARTYVS--IMRGTPLLVQI---FVVYYGLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G         + P    + + LS    A+++E +R  ++ V RGQ  AA +LGLT  +
Sbjct: 79  GIG-------IALEPTPAGV-LTLSLNVGAYLSESMRGAILGVSRGQWLAAYSLGLTPAQ 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T Q + + L 
Sbjct: 131 ALRYVIGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLA 190

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IY  LS  ++   + L  +++L  + 
Sbjct: 191 VAAIYWVLSTGLSGVQHMLERRLSLPGRH 219


>gi|16264164|ref|NP_436956.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|15140289|emb|CAC48816.1| EhuD [Sinorhizobium meliloti 1021]
          Length = 220

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 73/135 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I L  +   + AE+ R+G+  VPRGQ EAA A  LT R+    V+LPQA+  +
Sbjct: 86  PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L +  + + K + L  A+   +L++   +I N   + IE + +    +L +S++   
Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVF 205

Query: 384 FMNRLNAKIALKEKK 398
           F+  L A+ +  E++
Sbjct: 206 FLRWLEARYSRVEER 220


>gi|125718376|ref|YP_001035509.1| ABC transporter membrane-spanning permease, arginine/histidine
           transport, putative [Streptococcus sanguinis SK36]
 gi|323351207|ref|ZP_08086863.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|125498293|gb|ABN44959.1| ABC transporter membrane-spanning permease, arginine/histidine
           transport, putative [Streptococcus sanguinis SK36]
 gi|322122431|gb|EFX94142.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|209516319|ref|ZP_03265176.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503255|gb|EEA03254.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 218

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQ
Sbjct: 80  GIDVSP-WAAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++  + P     + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++ 
Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +  +   L  +  + + +
Sbjct: 199 FPLTWYARVLEKRQKVGQHR 218


>gi|325924206|ref|ZP_08185766.1| amino acid ABC transporter membrane protein, PAAT family
           [Xanthomonas gardneri ATCC 19865]
 gi|325545337|gb|EGD16631.1| amino acid ABC transporter membrane protein, PAAT family
           [Xanthomonas gardneri ATCC 19865]
          Length = 583

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 51/76 (67%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + LS   AAF AEI+R G+++V +GQ EA+ ALGL   +  R ++LPQAMR+I+
Sbjct: 163 QFAAAVLGLSLNQAAFSAEIIRGGILSVDQGQFEASAALGLPRVRQIRRIVLPQAMRTIL 222

Query: 325 PPLTSQYLNLLKNSSL 340
           P   +  +NL K +S+
Sbjct: 223 PGAFNDVINLAKGTSV 238


>gi|296532450|ref|ZP_06895174.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296267225|gb|EFH13126.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 226

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  IAL+ +  A +AE +R  + +VP GQMEAA A+GL   +    V+LPQA+R +
Sbjct: 93  PAFWAGVIALTAFATAHVAETLRGAVESVPAGQMEAAKAIGLRFPQRLAYVVLPQALRRM 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +PP  +  L ++K ++L   +G  +L+     ++ +    I+  L     YL ++  IA
Sbjct: 153 LPPWVNTGLEVVKGTTLLSVIGVVELLLASQQVMARNYLIIDFYLTAGLFYLVINAAIA 211


>gi|261823279|ref|YP_003261385.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607292|gb|ACX89778.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 238

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)

Query: 220 PLLYIS---TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           P+ Y++   T LI G+P L++I L Y      L     + G   F G     P F++  +
Sbjct: 56  PVRYLADGYTTLIRGVPDLLIIYLLYFGGSSALTLLAKLFGSNEFFG----FPGFLAGVL 111

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A+   + A   E+ R    AV +G++EAA A G+      R +++P  +R  IPPL + +
Sbjct: 112 AVGISSGAQQTEVYRGAFYAVSKGEIEAAKACGMPTLLRLRRIIIPLLLRHAIPPLGNVW 171

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +LK S+L    G A+L++   T    TG+  +  +    +YL +SI     M R  + 
Sbjct: 172 QLVLKTSALVSVTGVAELMTQSQTGAGSTGKPFDFFMAAALLYLLISICSGWIMRRAESH 231

Query: 392 IALKEKK 398
            +   K+
Sbjct: 232 YSRGVKR 238



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 35/69 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +  +   +L+G   T  LA  G +   +IGT+    ++  N+ V ++   Y  + R +P
Sbjct: 13  GEHGWGKLLLIGAGMTIALAIGGFLLGAVIGTIGAWSKICGNRPVRYLADGYTTLIRGVP 72

Query: 141 PLVVIFFLY 149
            L++I+ LY
Sbjct: 73  DLLIIYLLY 81


>gi|238919597|ref|YP_002933112.1| L-cystine transport system permease protein TcyB [Edwardsiella
           ictaluri 93-146]
 gi|238869166|gb|ACR68877.1| L-cystine transport system permease protein TcyB [Edwardsiella
           ictaluri 93-146]
          Length = 232

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 26/185 (14%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           RL   F+    +  PLL +  FLIF GLP+                        G T+  
Sbjct: 66  RLCADFYIWVFRGTPLL-VQLFLIFYGLPS-----------------------AGITLD- 100

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  I  +    A+ +EIVR  +++VP+GQ EAA A+G++  +A R V+LPQ+    +
Sbjct: 101 AFPAALIGFTLNVGAYSSEIVRGAILSVPQGQWEAASAIGMSSSQAMRRVILPQSAFVSL 160

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL++ +++L+K++SLA  +   ++      I+    + + I      IYL+ S ++   
Sbjct: 161 PPLSNVFISLIKDTSLAAVITVPEMFLAAQRIVAVNYEPLIIYSETALIYLAFSTLLGKL 220

Query: 385 MNRLN 389
             RL 
Sbjct: 221 QLRLE 225


>gi|227544223|ref|ZP_03974272.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908218|ref|ZP_07125684.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|227185794|gb|EEI65865.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300894645|gb|EFK88001.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 215

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 1/112 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G  +V +GQ EAA  L L++ +  R +++PQ ++ +IP + ++ +NL+K+
Sbjct: 98  AAYFAEIFRGGFQSVDQGQFEAARVLRLSYWQTLRKIIIPQVIKIVIPSIGNEVINLVKD 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           SSL   +G  DL+  G    ++    + ++L+ + IYL L  +  L + ++ 
Sbjct: 158 SSLVYVIGLGDLLRAGNVATSRDVTLVPLMLVGL-IYLILVGICTLILRQVE 208


>gi|212213032|ref|YP_002303968.1| arginine transport system permease protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011442|gb|ACJ18823.1| arginine transport system permease protein [Coxiella burnetii
           CbuG_Q212]
          Length = 223

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 10/173 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+I G P LV I + Y         GQF++    I  S +   F    IAL+  T+A+  
Sbjct: 55  FIIRGTPLLVQIFIIYYGS------GQFHWLRETILWSVLKRPFGCAIIALAINTSAYTT 108

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            ++R  + ++P GQ+EAA ALGL+  KA + +++P+A+  ++P  +++ + +LK +SLA 
Sbjct: 109 VLLRGAIRSIPTGQIEAAKALGLSRWKAYQRIIIPRAICIVLPAYSNEVIMILKGTSLAG 168

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+  +
Sbjct: 169 TITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQ 221


>gi|91778282|ref|YP_553490.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690942|gb|ABE34140.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 240

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 12/199 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259
           A +LSR    +T + +  +Y + F   G+P L++I   Y  +F    L    GQ+    G
Sbjct: 45  AAKLSRL---RTLRVIGDIYTTVFR--GVPELLVI---YLFYFGGSTLVTNVGQWFGAEG 96

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P F+   +A+   + A+ AE+ RS ++AV RG++EAA A+G+      R +L+PQ 
Sbjct: 97  FVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARAIGMPTLTMARRILIPQV 156

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P + + +   LK+S+L    G A+L+         T Q     ++   +YL ++ 
Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLLMTS 216

Query: 380 MIALFMNRLNAKIALKEKK 398
           +     NR  A++    K+
Sbjct: 217 ISNRVFNRAEARVGRSFKR 235


>gi|154245547|ref|YP_001416505.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154159632|gb|ABS66848.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 227

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+ + P F +  IAL     A+ AEI+R+G  ++P+GQ+EAA  L LT  +A   V LPQ
Sbjct: 84  GAKIGP-FPAAVIALVVNVGAYTAEIMRAGFRSIPKGQIEAAHCLALTPTQALWSVQLPQ 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+  + P L SQ++ ++  +++   +   +L  V   I + T +  E+ L+   IYL+++
Sbjct: 143 AVERVYPALVSQFVLMMLATAIMSQISAEELTGVAYMIQSFTFRGFEVYLVIAVIYLAMA 202

Query: 379 IMIAL 383
            ++ L
Sbjct: 203 SLLRL 207



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 79  YTSDSSYATAILVGFVNTFWLAF----SGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           Y  D S+        +N  WL      + ++P  I+GTL   GRL     V      YVE
Sbjct: 3   YEFDFSFLNEYWPDLLNGVWLTLGMTVASVLPGFILGTLCAVGRLYGPPYVQRAVVFYVE 62

Query: 135 VFRNIPPLVVIFFLY 149
             RN P ++ +F+L+
Sbjct: 63  AIRNTPLIIQVFWLF 77


>gi|328462992|gb|EGF34795.1| amino acid ABC transporter permease [Lactobacillus rhamnosus MTCC
           5462]
          Length = 136

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 49/76 (64%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G  A+  GQ EA+  L +T  +A R V++PQ ++ ++P + ++ +NL+K+
Sbjct: 4   AAYFAEIFRGGFGAIDEGQFEASTVLNMTRWQALRFVVIPQVVKIVLPSIGNEVINLVKD 63

Query: 338 SSLAVAVGFADLVSVG 353
           SSL   +G  DL+  G
Sbjct: 64  SSLVYVIGLGDLLRAG 79


>gi|242240716|ref|YP_002988897.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132773|gb|ACS87075.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 502

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 10/210 (4%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V ++  GIVL L    L +       + L  +YI  +L   LP LVL+   + L   
Sbjct: 26  QLSVLTWCAGIVLGLLVA-LGKQSRLSGVRRLASVYI--WLFRSLPLLVLLIFIFNL--- 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +  F    G    P F +  IAL     A+IAEI R GL++V +GQ EA  ALGL  
Sbjct: 80  -PQI--FPLTAGLLSDP-FSAGLIALIVSETAYIAEIHRGGLLSVQKGQFEAGRALGLRA 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    +++PQA+R  +P L ++++ ++K +SL   +  ++++ VG  +  +  + +E +
Sbjct: 136 AQIRFYIVIPQALRISLPTLVNEFITIVKLTSLVSVISLSEILMVGQRLYTENFKVLETL 195

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L     Y+ +  +    +  L  ++ ++++
Sbjct: 196 LAVACYYVLIVTLFERLIGWLEKRMDVQQR 225


>gi|190894701|ref|YP_001984994.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700362|gb|ACE94444.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 11/169 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +I G P LVL+   Y  +    V        G  + P F +  +AL+ + ++ + EIV
Sbjct: 60  TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAVFCSSHVGEIV 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   VG
Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVVG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+L+     II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217


>gi|325696133|gb|EGD38024.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|325690798|gb|EGD32799.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
 gi|327463112|gb|EGF09433.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +T+ GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTVFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|325267600|ref|ZP_08134252.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Kingella denitrificans ATCC 33394]
 gi|324980950|gb|EGC16610.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Kingella denitrificans ATCC 33394]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 32/219 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT-------RLSRHFHEKTGKALPLLYISTFLIFGLP 233
           LT++  A   V S  +G+  ++          RLSR + E + +  PLL    FL +GLP
Sbjct: 19  LTLELAAYGIVLSLAVGLAAAVCMAYRLPVLDRLSRGYVELS-RNTPLLIQLFFLYYGLP 77

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                  K  +  D                  F    IAL      ++AE +R+GL+AVP
Sbjct: 78  -------KIGIKIDG-----------------FTCGVIALVFLGGGYMAEALRAGLLAVP 113

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA A+GL + +  R V+LPQA    +P + +  L L+K +S+  AV  A+L+ V 
Sbjct: 114 KGQTEAAKAIGLGNVQIFRYVVLPQAWAVSLPAIAANVLFLIKETSVIGAVSVAELMFVT 173

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             II    +  E + +    YL + + ++++      K+
Sbjct: 174 KDIIGMDYKTNEALFLLFVSYLIILLPVSVWARYAERKV 212


>gi|153010172|ref|YP_001371386.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562060|gb|ABS15557.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 215

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +I   + +LG  ++  L A RLSR       + L   Y+S F   G P LV +   + L+
Sbjct: 22  QISALALILGFAVAAILVAGRLSRS---PILRGLAAAYVSVFR--GTPCLVQL---FILY 73

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P +G         + P F +  I L     A+++E +R  + +V RGQ EAA ++G 
Sbjct: 74  FGGPQIG-------INLEP-FAAGVIGLGLNIGAYMSESIRGAIQSVDRGQSEAARSIGF 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  R V+LPQA R +I PL    + LLK S+L   +   +L       I  T +  E
Sbjct: 126 GRGQTMRFVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTYTAQRFIGSTYKPFE 185

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I  +   +Y+ +  ++A  ++ L+ + A +
Sbjct: 186 IFGVAAVLYMIIIYIVARGVDLLDKRFAAQ 215


>gi|134295678|ref|YP_001119413.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138835|gb|ABO54578.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 241

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 71/128 (55%), Gaps = 10/128 (7%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L+LI   Y   F  P+L   +  G +TV         AL+    A++A  V +G++A
Sbjct: 72  IPVLMLIFWTY---FLMPMLLHMDVPGLATV-------VCALALIGGAYLAHAVHAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
              GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  
Sbjct: 122 AGEGQRQAGLSLGLTRWQTVRHVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSF 181

Query: 352 VGGTIINQ 359
           V   + N+
Sbjct: 182 VATQVNNR 189


>gi|167738654|ref|ZP_02411428.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 14]
          Length = 176

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 23/143 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P+L +  +  F LP L        LH D P L                ++  ALS  
Sbjct: 15  RAIPVLMLIFWTYFLLPVL--------LHADVPGLA---------------AVVCALSLV 51

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K
Sbjct: 52  GGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVK 111

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
           ++SLA  VG  +L  V   + N+
Sbjct: 112 DTSLAYIVGVPELSFVATQVNNR 134


>gi|163795107|ref|ZP_02189075.1| polar amino acid uptake family ABC transporter, permease protein
           [alpha proteobacterium BAL199]
 gi|159179505|gb|EDP64034.1| polar amino acid uptake family ABC transporter, permease protein
           [alpha proteobacterium BAL199]
          Length = 300

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 75/140 (53%), Gaps = 10/140 (7%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++     L+    A ++E+VR  + ++P GQ E+A +L    R+   +++LPQ ++ +
Sbjct: 164 PDWVKATFGLALPVMANVSELVRGAIQSIPSGQWESAESLAFNRRQTLWMIILPQCVKRM 223

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-------ILIWMFIYLS 376
           +PP  + Y  L   + LA  VG ++++++ G +++  G   ++       IL+W F+Y  
Sbjct: 224 LPPWMNLYAILTMATVLASVVGVSEVMTLTGRVLSAEGGRTDLLVPFYSYILLWFFLY-- 281

Query: 377 LSIMIALFMNRLNAKIALKE 396
               IAL   RL  + A+K 
Sbjct: 282 -CYPIALLTVRLERRFAVKS 300


>gi|134278590|ref|ZP_01765304.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia pseudomallei 305]
 gi|134250374|gb|EBA50454.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia pseudomallei 305]
          Length = 636

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|170695841|ref|ZP_02886982.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139265|gb|EDT07452.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 216

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 1/125 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP  ++   A+S  +A++IAEI+R G +++P G +EAA  LGL+     R +L+PQ
Sbjct: 81  GINVSP-LVAAISAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLSPFDTLRRILVPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +P L ++ + L+K SSL   VG A+L      +   T + +E  +    IY  + 
Sbjct: 140 AFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNLAASTYRPLEAYVAAGLIYFVIC 199

Query: 379 IMIAL 383
             +AL
Sbjct: 200 GALAL 204


>gi|76817435|ref|YP_335895.1| amino acid ABC transporter ATP-binding/permease [Burkholderia
           pseudomallei 1710b]
 gi|254262714|ref|ZP_04953579.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei 1710a]
 gi|254301318|ref|ZP_04968762.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           406e]
 gi|76581908|gb|ABA51382.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei 1710b]
 gi|157811491|gb|EDO88661.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           406e]
 gi|254213716|gb|EET03101.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei 1710a]
          Length = 636

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|324993848|gb|EGC25767.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324994831|gb|EGC26744.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|325687272|gb|EGD29294.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|240145778|ref|ZP_04744379.1| L-cystine ABC transporter, permease protein [Roseburia intestinalis
           L1-82]
 gi|257202110|gb|EEV00395.1| L-cystine ABC transporter, permease protein [Roseburia intestinalis
           L1-82]
          Length = 230

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 12/177 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFI 281
           F+I  +P L  IA  Y   F   P+L Q   +     +P    ++++   ALS    A+ 
Sbjct: 56  FIINKIPVLKQIAGIYIWVFRGTPLLVQLFIMYWGICNPLGINKWVACISALSLNVGAYS 115

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ ++++ +GQ EA  +LG+++++  R +++PQA    IPPL + ++ L+K++SLA
Sbjct: 116 AETIRAAILSINKGQWEAGYSLGMSYQQTFRRIIIPQAATVSIPPLFNTFIGLVKDTSLA 175

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +         G +  +  +A    L +++IY+ ++++  LF   L       EKK
Sbjct: 176 STIMI-------GEMFRKAQEAAASSLEYLWIYIEVALIYLLFCTLLTGLQKWIEKK 225


>gi|225420154|ref|ZP_03762457.1| hypothetical protein CLOSTASPAR_06497 [Clostridium asparagiforme
           DSM 15981]
 gi|225041211|gb|EEG51457.1| hypothetical protein CLOSTASPAR_06497 [Clostridium asparagiforme
           DSM 15981]
          Length = 219

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 68/115 (59%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++P+GQ EAA  LG +  +    ++LPQ ++ I+P +T++ + L+K+
Sbjct: 102 AAYFAEIYRSGIQSMPQGQYEAAKILGYSRGQTFFKIILPQVIKRILPSVTNEVITLVKD 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +   ++ S+   +       I  I   +F Y+  ++++AL M  L  K+
Sbjct: 162 TSLAFTLSVMEMFSIAKMLAASQSNMIPFIAAGLFYYV-FNLIVALAMEGLEKKL 215


>gi|242311107|ref|ZP_04810124.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           1106b]
 gi|242134346|gb|EES20749.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           1106b]
          Length = 636

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|307243525|ref|ZP_07525673.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306493081|gb|EFM65086.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 205

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 16/172 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS  LGIV++    RLS   + K   ++   YI  +++ G P L+      Q+ F   V
Sbjct: 17  IFSIPLGIVVAF--VRLS---NNKIASSVSSFYI--WIMRGSPLLL------QMMFFYYV 63

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L     I    V  +    +IA     AA+ AEI R GL+++ +GQ EAA  LG      
Sbjct: 64  LP---IISPKLVFDQLTVAFIAFVINYAAYYAEIFRGGLLSIDKGQFEAAKVLGFDKITM 120

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            + ++LPQ  + ++PP++++ + L+K++SL   +G  DL+ V     N+   
Sbjct: 121 YKRIILPQLTKRVLPPVSNELITLVKDTSLVYILGLNDLLRVATAASNREAS 172


>gi|239931079|ref|ZP_04688032.1| amino acid ABC transporter transmembrane protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291439449|ref|ZP_06578839.1| amino acid ABC transporter permease protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291342344|gb|EFE69300.1| amino acid ABC transporter permease protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 238

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 63/122 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +EIVR  L AV   Q E  IAL  T  +  RL+LLPQA+  +IPP ++ 
Sbjct: 88  LALGLTYGAYGSEIVRGALAAVDPAQREGGIALSFTPWQRMRLILLPQAVPEMIPPFSNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL   G  +     ++ EI    + IY  ++ ++   M  L  
Sbjct: 148 LVELLKGTALVSIMGMGDLAFSGNLVRLALQESAEIYTYILLIYFVIAFLLTRLMRGLEK 207

Query: 391 KI 392
           K+
Sbjct: 208 KL 209


>gi|194016486|ref|ZP_03055100.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
 gi|194011959|gb|EDW21527.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
          Length = 253

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 65/113 (57%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           LYI     TAA+ +EI RS L +VP  Q EAA ++GLT  +  R  L+PQA +  +P + 
Sbjct: 100 LYITYGLNTAAYFSEIFRSALSSVPASQYEAAASIGLTKWQIYRRTLIPQAGKIALPNIG 159

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              +NLL+N+SLA  +G  D++    T+     + +E   I   I++ LS+++
Sbjct: 160 VAIVNLLQNTSLAFTLGVMDIIGKVQTLGALYYRVLEGYFIAAVIFIMLSLLL 212


>gi|251799197|ref|YP_003013928.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247546823|gb|ACT03842.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 262

 Score = 66.6 bits (161), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 66/108 (61%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+++E +R+ ++AV RGQ+EAA A+G+T  +A   ++LPQA+   +P  T+  + +LK+
Sbjct: 109 GAYVSETIRAAVLAVNRGQVEAAYAVGMTGYQAFTRIVLPQAVGIAVPVFTNLVIAMLKD 168

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           +SLA  +G  ++     T+ + +   IE  +    IYL +SI++   M
Sbjct: 169 TSLAFTLGVMEMTGKAQTLGSLSQHFIETYIALALIYLVMSIVLERLM 216


>gi|330966765|gb|EGH67025.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 232

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S   P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFSAVRESFFWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|254252391|ref|ZP_04945709.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124895000|gb|EAY68880.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 252

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 23/133 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P+L +  +  F +PTL        LH D P L                ++  AL+  
Sbjct: 81  RAIPVLMLIFWTYFLMPTL--------LHMDVPGLA---------------TVVCALALV 117

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K
Sbjct: 118 GGAYLAHAVHAGIVAAGAGQRQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVK 177

Query: 337 NSSLAVAVGFADL 349
           ++SLA  VG  +L
Sbjct: 178 DTSLAYIVGVPEL 190


>gi|291534358|emb|CBL07470.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Roseburia intestinalis M50/1]
          Length = 230

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 12/177 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFI 281
           F+I  +P L  IA  Y   F   P+L Q   +     +P    ++++   ALS    A+ 
Sbjct: 56  FIINKIPVLKQIAGIYIWVFRGTPLLVQLFIMYWGICNPLGINKWVACISALSLNVGAYS 115

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ ++++ +GQ EA  +LG+++++  R +++PQA    IPPL + ++ L+K++SLA
Sbjct: 116 AETIRAAILSINKGQWEAGYSLGMSYQQTFRRIIIPQAATVSIPPLFNTFIGLVKDTSLA 175

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +         G +  +  +A    L +++IY+ ++++  LF   L       EKK
Sbjct: 176 STIMI-------GEMFRKAQEAAASSLEYLWIYIEVALIYLLFCTLLTGLQKWIEKK 225


>gi|186475920|ref|YP_001857390.1| glutamine ABC transporter permease [Burkholderia phymatum STM815]
 gi|184192379|gb|ACC70344.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 218

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 59/101 (58%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR   ++VPRG  EA +ALG+   +    V+ P A+R + P L +Q++  LK
Sbjct: 100 SGAYIAEIVRGAFLSVPRGLKEAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           ++SL + +G  +L   G  I+    +A+EI      IYL +
Sbjct: 160 DTSLFIVIGVGELTRQGQEIMASNFRAVEIWTAVAAIYLCM 200


>gi|126444102|ref|YP_001063396.1| amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia pseudomallei 668]
 gi|126223593|gb|ABN87098.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia pseudomallei 668]
          Length = 636

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|307316662|ref|ZP_07596105.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti AK83]
 gi|306897860|gb|EFN28603.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti AK83]
          Length = 221

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 73/135 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I L  +   + AE+ R+G+  VPRGQ EAA A  LT R+    V+LPQA+  +
Sbjct: 86  PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L +  + + K + L  A+   +L++   +I N   + IE + +    +L +S++   
Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIISLISVF 205

Query: 384 FMNRLNAKIALKEKK 398
           F+  L A+ +  E++
Sbjct: 206 FLRWLEARYSRVEER 220


>gi|296160744|ref|ZP_06843558.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295889047|gb|EFG68851.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 240

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 12/199 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259
           A +LSR    +T + +  +Y + F   G+P L++I   Y  +F    L    GQ+    G
Sbjct: 45  AAKLSRL---RTLRVIGDIYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEG 96

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P F+   +A+   + A+ AE+ RS ++AV RG++EAA A+G+      R +L+PQ 
Sbjct: 97  FVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARAIGMPTLTMARRILIPQV 156

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P + + +   LK+S+L    G A+L+         T Q     ++   +YL ++ 
Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLLMTS 216

Query: 380 MIALFMNRLNAKIALKEKK 398
           +     NR  A++    K+
Sbjct: 217 ISNRVFNRAEARVGRSFKR 235


>gi|15889179|ref|NP_354860.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156998|gb|AAK87645.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 267

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 104/195 (53%), Gaps = 10/195 (5%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGG 259
           F   L+    EK+ +    +Y + F   GLP L+ + + Y   Q+   + V G   F G 
Sbjct: 72  FLIALAAQSEEKSLRLAAGIYTTIFR--GLPELLTLFIVYYGVQMLL-QSVAGYVGFSGP 128

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             ++  F++  +ALS   +++ +E++ S   A+P+GQ EA  ALGL+  +   L+++PQ 
Sbjct: 129 VEINA-FVAGMLALSVVFSSYASEVLLSAFKAIPKGQYEAGDALGLSRSRTMVLIIIPQL 187

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P +T+ ++ LLK++S    +G AD++   G     + +A     I   +YL L++
Sbjct: 188 VRIALPGMTNLWVILLKDTSYVSIIGLADIIRQTGIAARVSKEAFFFYGIACLLYLILAL 247

Query: 380 MIAL---FMNRLNAK 391
           + ++   F++R + K
Sbjct: 248 ISSVGIGFIDRWSRK 262


>gi|260102961|ref|ZP_05753198.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260083246|gb|EEW67366.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
          Length = 215

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 72/132 (54%), Gaps = 1/132 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P + +  +A     AA+ AEI R G  ++  GQ EAA  L L+  +    +++PQ ++
Sbjct: 82  VFPRYQAALLAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLSRWQTMTKIVIPQVIK 141

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P + ++ +NL+K+SSL   +G  DL+  G   + +    + ++L+ + IYL L  + 
Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLLLISIC 200

Query: 382 ALFMNRLNAKIA 393
           A  + +L   ++
Sbjct: 201 AFVLKKLEKHVS 212


>gi|308234441|ref|ZP_07665178.1| amino acid ABC transporter permease protein [Atopobium vaginae DSM
           15829]
 gi|328944287|ref|ZP_08241751.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
 gi|327491206|gb|EGF22981.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
          Length = 585

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 110/206 (53%), Gaps = 20/206 (9%)

Query: 194 FVLGIVLSLFAT-RLSRHFH-----EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           F++G++++++ T ++S+H        K+   L  +YI  F   G P +V   L   + + 
Sbjct: 381 FLIGLLIAIYQTIQVSKHHRIRYMLYKSVAVLIRIYIEVFR--GTPMMVQAML---IFYG 435

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             +L  FN      +SP   S +  +S  + A+++E VR G++ V +GQ+E A ALGL H
Sbjct: 436 SKLL--FNL----DLSP-LTSAFFIVSVNSGAYLSETVRGGILGVSKGQLEGAHALGLNH 488

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNL-LKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                 ++LPQA+ SI+P + ++ LN+ +K++S+   +  ++L  +  +I   T Q  + 
Sbjct: 489 WDTMVHIILPQAVISILPSVGNE-LNMNIKDTSVLNVIAVSELFFITKSIAGTTYQTFQT 547

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            LI   IY +L+ + +L +  +   I
Sbjct: 548 YLIASVIYFALTFLASLGLKYVEKHI 573


>gi|239820275|ref|YP_002947460.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805128|gb|ACS22194.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 241

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 18/223 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   N   LS    T+           V+G  L+L   RLSRH       A    YI  
Sbjct: 11  FGYLFNPYILSGAFTTLWLTLAAIAGGLVVGCALAL--ARLSRH---DWLAAPAHFYIWV 65

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P LV + + Y      P LG    +  S V    + L +      AA++AE+VR
Sbjct: 66  FR--GTPLLVQLIIIYT---GLPQLG----LKLSVVESALLGLILN----EAAYLAEVVR 112

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ +VP GQ  AA A+G +  ++ R +++PQAMR IIP L +    LLK +S+   +  
Sbjct: 113 GGIQSVPAGQTNAARAVGFSSAQSMRYIVMPQAMRLIIPTLGNSINGLLKTTSITSVISM 172

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +L+     +I +    +E+ ++    YL ++ +  +   R+ 
Sbjct: 173 EELLRRTQVLIQEKFMVLELFIVAAIYYLLMTTVWDVIQRRIE 215


>gi|148543750|ref|YP_001271120.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184153156|ref|YP_001841497.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|194468312|ref|ZP_03074298.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|227363270|ref|ZP_03847402.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325682122|ref|ZP_08161640.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530784|gb|ABQ82783.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183224500|dbj|BAG25017.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|194453165|gb|EDX42063.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|227071726|gb|EEI10017.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324978766|gb|EGC15715.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 215

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 1/112 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G  +V +GQ EAA  L L++ +  R +++PQ ++ +IP + ++ +NL+K+
Sbjct: 98  AAYFAEIFRGGFQSVDQGQFEAARVLRLSYWQTLRKIIIPQVIKIVIPSIGNEVINLVKD 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           SSL   +G  DL+  G    ++    + ++L+ + IYL L  +  L + ++ 
Sbjct: 158 SSLVYVIGLGDLLRAGNVATSRDVTLVPLMLVGL-IYLILVGICTLILRQVE 208


>gi|87309628|ref|ZP_01091762.1| putative inner membrane component of binding-protein-dependent
           transport system [Blastopirellula marina DSM 3645]
 gi|87287392|gb|EAQ79292.1| putative inner membrane component of binding-protein-dependent
           transport system [Blastopirellula marina DSM 3645]
          Length = 211

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 13/200 (6%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +V SL A  L R   +   +    +Y+ TF   G   +VL+   Y  +F  P       I
Sbjct: 20  LVSSLLAG-LGRDSRDPIVRWTATIYVETF--RGASAIVLL---YWFYFAMP-----GLI 68

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G S   P  ++  + L     A+ AE+VR+ + +VP GQ  AA AL LT  +  R ++LP
Sbjct: 69  GVSM--PAMVAGIVILGLNIGAYGAEVVRAAIHSVPVGQRIAAQALNLTPWQTMRYIVLP 126

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA  +  PPL +  + LLK+++L   +   DL  +G  +  +T +++ I  + + IY  L
Sbjct: 127 QAALAATPPLGNLMIELLKSTALVSMITVVDLTQMGMFLRTETHRSLAIFSMLLLIYFVL 186

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S  IA  + ++  ++A  + 
Sbjct: 187 SQCIAAAVRQIEHRLARGQD 206



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +   G+  A +   L G GR S + +V W   +YVE FR    +V++++ 
Sbjct: 1   MLQGLWVTILITLGGIAVALVSSLLAGLGRDSRDPIVRWTATIYVETFRGASAIVLLYWF 60

Query: 149 Y 149
           Y
Sbjct: 61  Y 61


>gi|327474723|gb|EGF20128.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|327490280|gb|EGF22068.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
 gi|328946747|gb|EGG40885.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 219

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+ + +T+A +AEI+R GL A+  GQ EA ++ G T  +  R ++LPQA+R ++P + SQ
Sbjct: 89  ISFTVFTSAALAEIIRGGLNAIDPGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQ 148

Query: 331 YLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMN 386
           ++ ++K++SL  +V    +L      ++ +  +A ++  +++    IY  ++  I+ F  
Sbjct: 149 FVTVIKDTSLLYSVIALQELFGSAQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSR 208

Query: 387 RLNAKIA 393
           +L+ + A
Sbjct: 209 KLSQRWA 215



 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|323141718|ref|ZP_08076592.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT
           12067]
 gi|322413793|gb|EFY04638.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT
           12067]
          Length = 264

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F   ++ +S  T A++AE VR G+ +V  GQ EAAIA+G+ H +  R V+LPQA+R
Sbjct: 103 MSPLFAG-FLVVSINTGAYMAETVRGGIESVDPGQKEAAIAIGMDHIQTMRCVILPQALR 161

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++P L +  +  +K++S+   +   +L     +      +  EI  I   IY  ++   
Sbjct: 162 NVMPQLGNNLIINIKDTSVLNVISVTELYFASKSAAGVYYKYFEIFFITCVIYFIMTFTA 221

Query: 382 ALFMNRLNAKI 392
           +  +  L +K+
Sbjct: 222 SRLLRWLESKM 232


>gi|53716338|ref|YP_106253.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia mallei ATCC 23344]
 gi|67640783|ref|ZP_00439578.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei GB8
           horse 4]
 gi|121597406|ref|YP_991279.1| His/Glu/Gln/Arg/opine amino acid ABC transporter
           permease/periplasmic amino acid-binding protein
           [Burkholderia mallei SAVP1]
 gi|124382596|ref|YP_001025690.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126446129|ref|YP_001077766.1| His/Glu/Gln/Arg/opine amino acid ABC transporter
           permease/periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|254176105|ref|ZP_04882763.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei ATCC
           10399]
 gi|254201135|ref|ZP_04907500.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH]
 gi|254205104|ref|ZP_04911457.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU]
 gi|254359229|ref|ZP_04975501.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei
           2002721280]
 gi|52422308|gb|AAU45878.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia mallei ATCC 23344]
 gi|121225204|gb|ABM48735.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei SAVP1]
 gi|126238983|gb|ABO02095.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei NCTC
           10247]
 gi|147748747|gb|EDK55822.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH]
 gi|147754690|gb|EDK61754.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU]
 gi|148028416|gb|EDK86376.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei
           2002721280]
 gi|160697147|gb|EDP87117.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei ATCC
           10399]
 gi|238521567|gb|EEP85018.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei GB8
           horse 4]
          Length = 636

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|330810056|ref|YP_004354518.1| ABC transporter, permease component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327378164|gb|AEA69514.1| ABC transporter, permease component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 216

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 73/128 (57%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  Y AA+  EIVR G++AVP     A+ +LGL++ +  R ++LP A R   P   + 
Sbjct: 91  IVLGVYAAAYFTEIVRGGVLAVPLSTRRASRSLGLSYVQDLRFIVLPIATRVAFPGWLNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L ++K+++L + +G  +L+    TI+ +  + + ++ I   IY  +S+++A    RL A
Sbjct: 151 VLGVMKDTALVMWIGIVELLRASQTIVTRIQEPLLVLCIAGLIYYVMSLVVA----RLGA 206

Query: 391 KIALKEKK 398
           ++  + ++
Sbjct: 207 RLERRWQE 214


>gi|225352766|ref|ZP_03743789.1| hypothetical protein BIFPSEUDO_04396 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156373|gb|EEG69942.1| hypothetical protein BIFPSEUDO_04396 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 380

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F G S  SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   
Sbjct: 134 FAFAGMS--SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLME 191

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +PQA+ +++P   +Q + +LK+++L   + + DL+ 
Sbjct: 192 IEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|322388046|ref|ZP_08061652.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
 gi|321141067|gb|EFX36566.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
          Length = 238

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 20/174 (11%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFD---------------KPVLGQFNFIGG 259
           +G  + L   +  L+F +P  +L+A   Q+H+                 P+L Q  FI  
Sbjct: 38  SGATMTLQVFALVLLFSIPLGILVAFCLQVHWKPLHYMIDVYIWVMRGTPLLLQLIFIYY 97

Query: 260 STVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
              S         +  IA +   AA+ AEI R G+  +P+GQ EAA  L        R +
Sbjct: 98  VLPSIGIRLDRVPAAIIAFTLNYAAYFAEIFRGGIATIPQGQYEAAKVLKFKPIDTVRYI 157

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  N+    I + L
Sbjct: 158 ILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRTAANRDASLIPMFL 211


>gi|294631808|ref|ZP_06710368.1| glutamate permease [Streptomyces sp. e14]
 gi|292835141|gb|EFF93490.1| glutamate permease [Streptomyces sp. e14]
          Length = 308

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 5/154 (3%)

Query: 250 VLGQFNFIGGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + G   F   + VS +   LY     L  Y A+ +AEIVR+G++A+P+GQ EAA A+GL 
Sbjct: 122 IFGNALFAQYTDVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQTEAAQAIGLR 181

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTG-QAI 364
             +    +LLPQA+ +++P + SQ + ++K+++L  A+  F +L++  G + +  G   I
Sbjct: 182 KTQVMTSILLPQAVTAMLPAIVSQLVVIVKDTALGGAILTFPELLASVGPMSSYYGANTI 241

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +   IY+ L+  +  F + L  ++   +K 
Sbjct: 242 ACFTVVAVIYVVLNFALTSFASWLERRLRRGKKS 275


>gi|146280413|ref|YP_001170566.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145568618|gb|ABP77724.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
          Length = 234

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 65/123 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+ AE++R  + +V RGQ EA  AL +T     R ++LPQA+ + IPP T+ 
Sbjct: 103 VGLGLNIGAYGAEVLRGAIRSVHRGQHEACHALNMTPLTRMRRIILPQALLAAIPPGTNL 162

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  +DL      +   T   +EI  + + IY  L+  I   M RL  
Sbjct: 163 LIELLKNTSLVSLITLSDLAFRARQLDQATLMTLEIFGLALVIYFVLAQTINFAMRRLEQ 222

Query: 391 KIA 393
           ++A
Sbjct: 223 RLA 225


>gi|58337336|ref|YP_193921.1| ABC transporter [Lactobacillus acidophilus NCFM]
 gi|227903960|ref|ZP_04021765.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus acidophilus ATCC 4796]
 gi|58254653|gb|AAV42890.1| ABC transporter [Lactobacillus acidophilus NCFM]
 gi|227868351|gb|EEJ75772.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus acidophilus ATCC 4796]
          Length = 224

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 17/175 (9%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+  F I  +PT+VL+   Y +++  P     N+      S  +M++ +A + + AA  
Sbjct: 60  LYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW------SATWMAV-LAFALWVAAEF 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++IVR  L +VP+ Q E+ +ALGL++ +  R VLLPQA++  +P   +    ++K +SL 
Sbjct: 108 SDIVRGALESVPKNQRESGLALGLSNIQLFRYVLLPQAIKLELPATINLATRVIKTTSLL 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391
           + +   ++++VG  II    Q     + W++     +Y  L   ++ +  RL A 
Sbjct: 168 MVINIMEVINVGQQIIEANNQKYPTGVFWIYGFIFILYFILDYPLSAWAKRLTAN 222


>gi|312171453|emb|CBX79711.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 221

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EAA  LGLT ++    V+LP AM+ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIRVTPKGQWEAARVLGLTRQQTFIRVVLPPAMKRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V F +L      I ++T  + E+ L+   +YL+LSI
Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLLYLALSI 203


>gi|302335554|ref|YP_003800761.1| amino acid ABC transporter membrane protein, PAAT family [Olsenella
           uli DSM 7084]
 gi|301319394|gb|ADK67881.1| amino acid ABC transporter membrane protein, PAAT family [Olsenella
           uli DSM 7084]
          Length = 217

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 6/121 (4%)

Query: 256 FIGGSTVSPEFM--SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           ++ G    P +M  ++ IA     AA+ AEI RSG+ ++P+GQ EAA  LG +  +    
Sbjct: 75  YVFGQQTGPSYMFVAVMIAFIVNYAAYFAEIYRSGIQSMPQGQYEAAQVLGYSRSQTFFG 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII----NQTGQAIEIILI 369
           ++LPQ  + I+P + ++ + L+K++SLA ++G A++ +    ++    N    A+  ++ 
Sbjct: 135 IILPQVFKRILPAMGNEVVTLVKDTSLAFSIGIAEMFTTSRALVASQRNMAPFALAALIY 194

Query: 370 W 370
           W
Sbjct: 195 W 195


>gi|241113593|ref|YP_002973428.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861801|gb|ACS59467.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +I G P LVL+   Y  +    V        G  + P F +  +AL+ + ++ + EIV
Sbjct: 60  TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAVFCSSHVGEIV 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G
Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+L+     II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIINYGIEHFGKYVERKTAL 217


>gi|220929053|ref|YP_002505962.1| polar amino acid ABC transporter inner membrane subunit
           [Clostridium cellulolyticum H10]
 gi|219999381|gb|ACL75982.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulolyticum H10]
          Length = 227

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 36/215 (16%)

Query: 193 SFVLGIVLSLFATRLSRHFHEK--------TGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            F+LG+ L+L   R+S++   +          +ALPLL I  +  F +P L         
Sbjct: 39  GFILGLFLAL--GRISKNIVIRRIVTCVIEITRALPLLLIVFWFYFFIPLLA-------- 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +P+             P  +S Y++L+ Y+A   AEI R GL ++ +GQ + A   G
Sbjct: 89  --GRPL-------------PILLSAYLSLTFYSAVNQAEIFRGGLTSIDKGQWQVASCTG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+H +    ++LPQ +R ++P      ++L K++S+   +G  DL  +G  +  +    +
Sbjct: 134 LSHYQCMTYIILPQVLRMMLPSFVGFLISLFKDTSVIYIIGIIDLTQIGIMLSQREPDKL 193

Query: 365 --EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               IL+ M +Y  L  +++ F  +  +K A   K
Sbjct: 194 IFSYILVAM-LYFILCFILSHFAKKWESKQARWSK 227


>gi|53722691|ref|YP_111676.1| ABC transport system, ATP-binding protein [Burkholderia
           pseudomallei K96243]
 gi|52213105|emb|CAH39144.1| putative ABC transport system, ATP-binding protein [Burkholderia
           pseudomallei K96243]
          Length = 636

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|52425742|ref|YP_088879.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307794|gb|AAU38294.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 223

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 30/218 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPT 234
           LT++ +    +FS ++G++ ++  +   R          +  +  PLL    FL FGL  
Sbjct: 23  LTLELSFWAILFSVIIGVICAVVMSYRVRGLQTIVKAYIELSRNTPLLIQIFFLYFGLSK 82

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              I +K +  F   V+G   F+GGS                   ++AE VR+G+ +V +
Sbjct: 83  ---IGVKLE-GFTCAVIG-LAFLGGS-------------------YMAEAVRAGIESVSK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+E+A+++GLT  +  R V+ PQA     P + +  L L+K +S+  A+  A+L+ +  
Sbjct: 119 GQVESALSIGLTPMQTFRYVVFPQAFAVATPAIGANCLFLMKETSVVSAIAIAELMFMAK 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            II    +  E + + +  YL + + +++F+  L  ++
Sbjct: 179 EIIGMDYKTNEALFLLVVFYLIILLPVSVFIGYLERRL 216


>gi|325289251|ref|YP_004265432.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324964652|gb|ADY55431.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 233

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 52/81 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S + AAF++E +RS  +AV  GQ+EAA ++GL   +A RLV+LPQ +   +P L + 
Sbjct: 101 ITFSLHIAAFLSEAIRSSYLAVGNGQLEAAYSIGLNDFQALRLVMLPQVLNLSLPTLGNN 160

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            L LLK +S+A  +G  D++ 
Sbjct: 161 ALILLKETSVAFTIGLVDIMG 181


>gi|227509546|ref|ZP_03939595.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190908|gb|EEI70975.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 190

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 91/188 (48%), Gaps = 24/188 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF+  ++L LF T L++  H K        +IS   + G+P LVL+ + Y          
Sbjct: 9   SFIGALILGLFLT-LAQMSHFKLLHWPARAFIS--FMRGVPMLVLLFIIY---------- 55

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F F  G+   P   +  IA +   +AF++E+ RS   AV RGQ EAA +LGL +R    
Sbjct: 56  -FGF--GANALP---AAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLPYRTVIA 109

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----I 367
            V+ PQA R  IP L +  L+L K++SLA  +  +++      I       + I     I
Sbjct: 110 KVIFPQAFRIAIPALGNILLDLFKSTSLAAMITVSEMFMDAKIIAGAYQDYMSIYIVMAI 169

Query: 368 LIWMFIYL 375
           + W F +L
Sbjct: 170 IYWFFCWL 177


>gi|166999442|ref|ZP_02265281.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei
           PRL-20]
 gi|243064504|gb|EES46690.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei
           PRL-20]
          Length = 636

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|126179310|ref|YP_001047275.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanoculleus marisnigri JR1]
 gi|125862104|gb|ABN57293.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Methanoculleus marisnigri JR1]
          Length = 228

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 65/116 (56%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AE +R  LI++  GQM AA ALG+T  +A R V+LPQA+R  IP L+++++ L+K S
Sbjct: 101 AYNAEYIRGALISIKEGQMVAAQALGMTRWQAIRNVILPQALRRAIPGLSNEFIYLIKYS 160

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           SLA  +   +L   G  +  +     E       +YL L  +    +N L  ++A+
Sbjct: 161 SLAYMITVIELSGAGKLVATKYFTYTESFAAVGIVYLVLVTITTFAVNILEKRVAV 216


>gi|90418081|ref|ZP_01225993.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337753|gb|EAS51404.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 236

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 7/102 (6%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F+S  IAL    +AF +E+  S   A+P GQ E A ALGL   +   LV+LPQ +R  +
Sbjct: 102 SFVSGMIALGFVFSAFASEVFLSAFRAIPHGQREGAAALGLGPARIMILVILPQIIRIAL 161

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           P L + ++NLLK+++L   +G AD       I+ QTG A  +
Sbjct: 162 PGLANLWMNLLKDTALVSVIGLAD-------IMRQTGIAARV 196


>gi|32266982|ref|NP_861014.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter hepaticus ATCC 51449]
 gi|32263034|gb|AAP78080.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter hepaticus ATCC 51449]
          Length = 219

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 7/118 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S YT++ +AEI+R GL +VP+GQ EAA + G +       ++LPQ  R +IP + SQ
Sbjct: 91  IGFSLYTSSVMAEIIRGGLNSVPKGQFEAAYSQGFSQFFTLFYIILPQTFRKVIPSMLSQ 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMI 381
            +   K++S    +  A+L      I+ Q     EI+        ++  I  SLS+++
Sbjct: 151 IITTFKDTSFLAGLQIAELTYQSKIILAQLASFQEILAMIGLIAGVYFVICFSLSVLV 208


>gi|326790344|ref|YP_004308165.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326541108|gb|ADZ82967.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 215

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 60/105 (57%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEIVR GL ++P+GQ E A + G    +    ++LPQ  +SIIP L SQ 
Sbjct: 90  SFTLFTSAVVAEIVRGGLNSIPKGQFEGAASQGFNFAQTLIYIILPQTFKSIIPALLSQV 149

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           + ++K++S    V  A+       ++       +II+++ F+ L+
Sbjct: 150 ITIIKDTSFLKVVDIAEFTRNSNVVLGSLRGFGQIIMLYGFVALT 194


>gi|332088879|gb|EGI93991.1| arginine transport system permease protein artQ [Shigella boydii
           5216-82]
          Length = 238

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 96/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+ +ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPMGQWESGLALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|300715447|ref|YP_003740250.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299061283|emb|CAX58392.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 218

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ YT+AF+ +I    ++A+P+GQ EA+  LGL   +    V+LPQ
Sbjct: 80  GIDVSP-WTAASLALTFYTSAFLVDIWHGSILALPKGQWEASRCLGLNFGQTLFRVVLPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 ALRIGIAPTVGFAVQVIKGTALASIIGFIELTKAGTILNNVTYQPFKV 186


>gi|292487347|ref|YP_003530219.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292898592|ref|YP_003537961.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198440|emb|CBJ45548.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552766|emb|CBA19811.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 221

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 60/102 (58%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EAA  LGLT ++    V+LP AM+ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIRVTPKGQWEAARVLGLTRQQTFIRVVLPPAMKRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V F +L      I ++T  + E+ L+   +YL+LSI
Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLLYLALSI 203


>gi|209516862|ref|ZP_03265712.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502678|gb|EEA02684.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 600

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 4/129 (3%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + L+   AAF AE++R G+ +V  GQ+EAA ALGL   +    ++LPQAMR
Sbjct: 163 ISP-FLAAVLGLTLNHAAFSAEVIRGGIQSVDHGQLEAAAALGLPRERQAWRIVLPQAMR 221

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLS 378
           +I+P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++ 
Sbjct: 222 AILPTAFNDLIALAKGSSMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWYLIILTVL 281

Query: 379 IMIALFMNR 387
             I +++ R
Sbjct: 282 SAIQVYVER 290


>gi|319404434|emb|CBI78037.1| glutamate/aspartate transport system permease protein [Bartonella
           rochalimae ATCC BAA-1498]
          Length = 235

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 52/75 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + AA+ AEI+R+G++++ +GQ  A  ALG+T+ +  R+V+LPQA R+++P   +Q
Sbjct: 110 ITFTAFEAAYFAEIIRAGILSISQGQKHAGQALGMTYWQNMRIVILPQAFRNMLPVFLTQ 169

Query: 331 YLNLLKNSSLAVAVG 345
            + L ++++L  A+ 
Sbjct: 170 IIILFQDTTLVYAIS 184


>gi|207724366|ref|YP_002254763.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207739075|ref|YP_002257468.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|206589584|emb|CAQ36545.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206592447|emb|CAQ59353.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 261

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 1/113 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++P F ++ I LS + AAF AE +R+G+ AVP   +EAA +LG   R+    V LP A+R
Sbjct: 112 LAPLFWAVAI-LSLHKAAFHAEALRAGIDAVPPAMLEAAASLGFGARERLWRVQLPLALR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + +P L +  + L+K SSLA A+   +L      I  Q G A+E +++ +  Y
Sbjct: 171 AALPSLMNNTVELVKASSLASAIAVGELTYSTLMIWTQRGNALECMVLLLLFY 223


>gi|224369139|ref|YP_002603303.1| GlnP5 [Desulfobacterium autotrophicum HRM2]
 gi|223691856|gb|ACN15139.1| GlnP5 [Desulfobacterium autotrophicum HRM2]
          Length = 226

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 116/227 (51%), Gaps = 16/227 (7%)

Query: 170 FLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           FL    ++ P +   T    K+   + ++GI++ L    L R +  K  +     Y++ F
Sbjct: 4   FLAYAAMALPEMLQGTVITLKLTAGALLIGILIGL-PLSLVRVYGGKLLQPFCSAYLTLF 62

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G P LV +   + +++  P LG    I  S ++  F++L     C +AA+  E  R 
Sbjct: 63  R--GTPLLVQL---FVVYYGLPELG----ISFSRMTAAFLTL----GCNSAAYQCEYFRG 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + AV +GQM AA  +G++  +  R ++LPQA+R +IP  +++++ ++K +++   +   
Sbjct: 110 AIQAVSKGQMRAARGIGMSKLQGIRHIILPQALRLVIPAWSNEFIAMVKYTAIVFLIAVP 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           DL+S    + +Q    I+  ++   IYL L   ++L ++ +  ++A+
Sbjct: 170 DLMSRAKILSSQNFAPIQTYILVALIYLVLVGTLSLGLHFVQQRLAV 216


>gi|188534744|ref|YP_001908541.1| Putative amino acid ABC transporter, permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188029786|emb|CAO97665.1| Putative amino acid ABC transporter, permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 218

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+CYT+AF+ +I    + A+P+GQ EA   LGL+  +    V+LPQ
Sbjct: 80  GIDLSP-WAAAALALTCYTSAFLVDIWFGSIRALPKGQWEACRCLGLSTGQTLFRVVLPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 ALRIGIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 186


>gi|16273100|ref|NP_439334.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           Rd KW20]
 gi|260581121|ref|ZP_05848942.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus
           influenzae RdAW]
 gi|1168526|sp|P45090|ARTQ_HAEIN RecName: Full=Arginine ABC transporter permease protein ArtQ
 gi|972902|gb|AAA95979.1| ArtQ [Haemophilus influenzae]
 gi|1574103|gb|AAC22829.1| arginine ABC transporter, permease protein (artQ) [Haemophilus
           influenzae Rd KW20]
 gi|260092250|gb|EEW76192.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus
           influenzae RdAW]
          Length = 221

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F    +ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVLALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|326803801|ref|YP_004321619.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651293|gb|AEA01476.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 548

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S  F +L I +S  T A++AE++R G+I V  GQ EAA A+G+ H +    V+LPQ
Sbjct: 395 GIDMSSMFAALLI-VSVNTGAYLAEVIRGGIIGVDDGQSEAAKAIGMNHFQTMTYVVLPQ 453

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+RSI+P L ++++  +K++S+   +   +L  V  +    T    +   I   IY  L+
Sbjct: 454 AIRSILPALGNEFVINIKDTSVLNVIAVTELFFVSKSAAGTTYLTFQTFFITAIIYFVLT 513


>gi|222081149|ref|YP_002540512.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725828|gb|ACM28917.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 219

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 13/166 (7%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           FA  L+R    K  +     YI   +I G+P L+++ L Y   +   + G F        
Sbjct: 37  FAVALARTSSIKAVRIAAGTYIQ--VIQGIPVLMILFLSY---YGLSLAG-FEL------ 84

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P  ++   +++ Y + ++AEI R  + AVP+ Q EA+ +L +T  +  R V+LPQA+R 
Sbjct: 85  -PPLIAAGASMTIYASGYLAEIWRGCIQAVPKQQWEASESLAMTRLQQYRYVILPQAVRI 143

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            +PP     + ++KN+S+   +GF +L   G  I N T Q   + +
Sbjct: 144 SLPPTVGFAVQVVKNTSITSIIGFVELARAGQLINNATFQPFRVFI 189


>gi|116254189|ref|YP_770027.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258837|emb|CAK09943.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 215

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 68/121 (56%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ Y +A++AEI RSG+ AVPRGQ +AA +LGL      RL++LPQA R    P     +
Sbjct: 93  LTFYASAYLAEIWRSGVEAVPRGQWDAAASLGLHRLLELRLIILPQAFRITRAPTVGFLV 152

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+K+++LA  +GF +L+     I N T +  ++  +   I+ +L   +  +   L  K 
Sbjct: 153 QLIKSTALASILGFDELLKTANAINNATFEPFKVYGLVALIFFALCYPLTQYARFLEKKA 212

Query: 393 A 393
           A
Sbjct: 213 A 213


>gi|254194309|ref|ZP_04900741.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           S13]
 gi|169651060|gb|EDS83753.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           S13]
          Length = 636

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|126457623|ref|YP_001076298.1| polar amino acid ABC transporter ATPase [Burkholderia pseudomallei
           1106a]
 gi|126231391|gb|ABN94804.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           1106a]
          Length = 636

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|186473900|ref|YP_001861242.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196232|gb|ACC74196.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 216

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 1/125 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP   ++  A+S  +A++IAEI+R G + +P GQ+EAA  LGL+     R + +PQ
Sbjct: 81  GINVSPIVAAIS-AVSLCSASYIAEILRGGFMNIPPGQIEAARMLGLSPLDMLRRIQVPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +P L ++ + L+K SSL   VG A++      I   T + +E  L    IY  + 
Sbjct: 140 AFRMTLPSLVNEMVLLIKASSLISVVGVAEITRTAQNIAASTYRPLEAYLAAGLIYFVIC 199

Query: 379 IMIAL 383
             +AL
Sbjct: 200 GALAL 204


>gi|50123002|ref|YP_052169.1| octopine transport system permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613528|emb|CAG76979.1| octopine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 242

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 12/187 (6%)

Query: 220 PLLYIS---TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           P+ Y++   T LI G+P L++I L Y      L     + G   F G     P F++  +
Sbjct: 60  PVRYLADGYTTLIRGVPDLLIIYLLYFGGSSALTLLAKLFGSNEFFG----FPGFLAGVL 115

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A+   + A   E+ R    AV +G++EAA A G+      R +++P  +R  IPPL + +
Sbjct: 116 AVGISSGAQQTEVYRGAFYAVSKGEIEAAKACGMPMLLRLRRIIVPLLLRHAIPPLGNVW 175

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +LK S+L    G A+L++   T    TG+  +  +    +YL +SI     M R  + 
Sbjct: 176 QLVLKTSALVSVTGVAELMTQSQTGAGSTGKPFDFFMAAALLYLLISICSGWIMRRAESH 235

Query: 392 IALKEKK 398
            +   K+
Sbjct: 236 YSRGVKR 242



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 34/69 (49%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +  +   +L+G   T  LA  G +    IGT+    ++  N+ V ++   Y  + R +P
Sbjct: 17  GEHGWGKLLLIGAGMTLALAICGFLLGAAIGTIGAWSKICGNRPVRYLADGYTTLIRGVP 76

Query: 141 PLVVIFFLY 149
            L++I+ LY
Sbjct: 77  DLLIIYLLY 85


>gi|25028402|ref|NP_738456.1| glutamate transport system permiase GluC [Corynebacterium efficiens
           YS-314]
 gi|259507459|ref|ZP_05750359.1| glutamate transport system permease protein GluC [Corynebacterium
           efficiens YS-314]
 gi|23493687|dbj|BAC18656.1| glutamate transport system permiase GluC [Corynebacterium efficiens
           YS-314]
 gi|259164947|gb|EEW49501.1| glutamate transport system permease protein GluC [Corynebacterium
           efficiens YS-314]
          Length = 249

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 3/123 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE +RSG+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +  + L 
Sbjct: 128 YTSAFVAESLRSGINTVHFGQAEAARSLGLGFSDIFRSIIFPQAVRAAIIPLGNTLIALT 187

Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           KN+++A  + VG A L+ +  TI N       +  I+   ++ L++ + L + +L  K+A
Sbjct: 188 KNTTIASVIGVGEASLL-MKSTIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLAEKMA 246

Query: 394 LKE 396
           +K+
Sbjct: 247 VKK 249


>gi|295096441|emb|CBK85531.1| L-arginine ABC transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 238

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L         L F + PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFAQIPVQMQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A+ ++ +R  L AVP+GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYSAYASQTLRGALKAVPQGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYVLKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|257870618|ref|ZP_05650271.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804782|gb|EEV33604.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 528

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV  GQ EAA A+G+TH +    V+LPQ MR+I+P   ++ +
Sbjct: 394 VSINTGAYMSEIVRGGIFAVDDGQFEAAQAIGMTHWQTMFKVVLPQVMRNILPATGNEII 453

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             +K++++   +  ADL   G +      Q  +   I   IYL L+I
Sbjct: 454 INIKDTAVLSVISVADLFFQGTSAAGTNYQYFQTFAIIGAIYLVLTI 500


>gi|299821271|ref|ZP_07053159.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299816936|gb|EFI84172.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 254

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247
           +F F++ I++S    +     H +  + +   Y+S F     P ++ I L Y    L  D
Sbjct: 50  LFGFLIAILMSFIQIK-----HVRILEPISKFYVSFFR--STPAILHIMLIYLGIPLIVD 102

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           K +  QF+    +   P  + + IALS    +++ E +RSG+IAV  GQ+EAA ++G+TH
Sbjct: 103 K-LSSQFDLGLSANKIPVAIFVIIALSFTAGSYLTESIRSGIIAVDAGQIEAAYSIGMTH 161

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+  R VL PQA    +P  T+  +  L  +S+A  V   ++      + +     ++  
Sbjct: 162 REMLRRVLFPQAFIIALPNFTNLAIGFLHTTSIAAIVAVPEITGTATIVASDNYAFLDAF 221

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    IY  L+++I        A  AL EKK
Sbjct: 222 IAAAIIYWLLTMII-------EAIHALLEKK 245


>gi|146317962|ref|YP_001197674.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|146320149|ref|YP_001199860.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|253751185|ref|YP_003024326.1| transport system membrane protein [Streptococcus suis SC84]
 gi|253753086|ref|YP_003026226.1| transport system membrane protein [Streptococcus suis P1/7]
 gi|253754908|ref|YP_003028048.1| transport system membrane protein [Streptococcus suis BM407]
 gi|145688768|gb|ABP89274.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|145690955|gb|ABP91460.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|251815474|emb|CAZ51052.1| transport system membrane protein [Streptococcus suis SC84]
 gi|251817372|emb|CAZ55108.1| transport system membrane protein [Streptococcus suis BM407]
 gi|251819331|emb|CAR44693.1| transport system membrane protein [Streptococcus suis P1/7]
 gi|292557745|gb|ADE30746.1| Amino acid ABC transporter, permease protein [Streptococcus suis
           GZ1]
 gi|319757454|gb|ADV69396.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis JS14]
          Length = 223

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 88/167 (52%), Gaps = 13/167 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           L+ G+P +VL+   + ++F  P +G Q + I  S          IA +  ++A+I+EI+R
Sbjct: 67  LMRGIPLMVLL---FFIYFGLPFMGLQLDAISASI---------IAFTSMSSAYISEIIR 114

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           + L A+ +GQ EAA +LGL      R +++PQA R  +PPL++  L+++K++SL   +  
Sbjct: 115 ASLSAIDKGQWEAARSLGLRTNVIHRKIIIPQAFRIALPPLSNVLLDMVKSTSLTAMITV 174

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++ +    +       + + +    IY  +  + A    +L  ++A
Sbjct: 175 PEIFNKAKIVGGAKSDYMTVYICVALIYWVICTLYAFGQLKLEKRLA 221


>gi|322513148|ref|ZP_08066280.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinobacillus ureae ATCC 25976]
 gi|322121080|gb|EFX92903.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinobacillus ureae ATCC 25976]
          Length = 238

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 103/204 (50%), Gaps = 19/204 (9%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 96  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++ PQA+R  +PPL++ ++ L K++SLA  V   ++  V   + N +   + + 
Sbjct: 148 MQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           +    IY     ++ L   +L  +
Sbjct: 208 IEAGLIYWCFCWVLFLIQAKLECR 231


>gi|260889042|ref|ZP_05900305.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Leptotrichia hofstadii F0254]
 gi|260861102|gb|EEX75602.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Leptotrichia hofstadii F0254]
          Length = 521

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 78/132 (59%), Gaps = 1/132 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +SP   +L+I +S  T A+++EI+R G+ ++  GQ EAA A+G+T+ +  + ++ PQ  
Sbjct: 374 NLSPMVAALFI-VSINTGAYMSEIIRGGIDSIDNGQFEAAKAIGMTNFQLMQSIIFPQMF 432

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P + ++ +  +K++S+   +   +L  +  +++    +  E+ +I   IY  L+  
Sbjct: 433 RNILPMIGNELIVNIKDTSVLNVISVTELFFISNSVVGTYSRYYEVFIITSVIYFFLTFT 492

Query: 381 IALFMNRLNAKI 392
           ++L + ++  +I
Sbjct: 493 LSLILKQIEKRI 504


>gi|237510507|ref|ZP_04523222.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei MSHR346]
 gi|235002712|gb|EEP52136.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei MSHR346]
          Length = 636

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 6/141 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  + L K SS+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKEKK 398
             ++   + R  A+ A++E +
Sbjct: 282 LSIVQAQVERRYARGAVREPE 302


>gi|222082286|ref|YP_002541651.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726965|gb|ACM30054.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 221

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 65/117 (55%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E++R+G+ +V RGQ EAA + G+T  +  R V+ PQA+R ++PP    Y+  LK SSL
Sbjct: 97  MSEVMRAGIESVGRGQWEAAQSSGMTFGQTMRHVVGPQALRVVLPPSVGVYVTTLKESSL 156

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A  +G+ +L   G  +   TG     +L+   +Y  ++  I+L    L  +  +  K
Sbjct: 157 ASIIGYVELTKTGLLVRESTGGGFAPLLMLGVLYFLINYGISLAGGVLERRYNVGTK 213


>gi|329927203|ref|ZP_08281501.1| putative arginine ABC transporter, permease protein ArtQ
           [Paenibacillus sp. HGF5]
 gi|328938603|gb|EGG34986.1| putative arginine ABC transporter, permease protein ArtQ
           [Paenibacillus sp. HGF5]
          Length = 219

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 60/103 (58%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           IG   V   F++  +A     AA+ AEI R GL+A+ +GQ EA+  LGL   + T  V+L
Sbjct: 82  IGEYLVLDRFVAACLAFVLNYAAYFAEIFRGGLLAIDKGQYEASKVLGLNRWQTTTKVIL 141

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PQ  R  +P ++++ + L+K+++L  AV   +L+    T +N+
Sbjct: 142 PQMFRVALPAVSNESITLVKDTALLYAVAVPELLHFAYTAVNR 184


>gi|330811618|ref|YP_004356080.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379726|gb|AEA71076.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 218

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 58/97 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + A +IAE+ RSGL AVPR Q EA  AL +    A R ++LPQA+R I+PPL + 
Sbjct: 94  LGIGLHYACYIAEVYRSGLDAVPRAQWEAVTALNIAPYDAYRNIILPQALRPIVPPLGNY 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            + +LK++ +  A+   +++     I ++  + +E I
Sbjct: 154 LVAMLKDTPVLSAITVVEIMQQAKNIGSENFRYLEPI 190


>gi|119964017|ref|YP_946818.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119950876|gb|ABM09787.1| putative amino acid ABC transporter, permease protein [Arthrobacter
           aurescens TC1]
          Length = 219

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 34/160 (21%)

Query: 190 FVFSFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           F F  VL +V++L   RLS +        F+    +  PLL     + FGLP++      
Sbjct: 29  FAFGLVLALVVALM--RLSPNWLLSGIGRFYVSVIRGTPLLVQLFVIFFGLPSI------ 80

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                            G  + P + S  IA S     + AEI+R+ +++VP+GQ EA  
Sbjct: 81  -----------------GIRLDP-WPSAIIAFSLNVGGYAAEIIRAAILSVPKGQWEAGH 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            +G++  +A   ++LPQA R  +PPL++ +++L+K++SLA
Sbjct: 123 TIGMSRPQALVRIILPQAARVSVPPLSNTFISLVKDTSLA 162


>gi|145627845|ref|ZP_01783646.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           22.1-21]
 gi|145639302|ref|ZP_01794908.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittII]
 gi|144979620|gb|EDJ89279.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           22.1-21]
 gi|145271605|gb|EDK11516.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittII]
 gi|309751178|gb|ADO81162.1| Arginine ABC transporter, permease protein ArtQ [Haemophilus
           influenzae R2866]
          Length = 221

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F    +ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVLALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|70730911|ref|YP_260652.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68345210|gb|AAY92816.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 220

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 24/180 (13%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G+  P L +  +  FGLP+                        G T+S  F +  +AL
Sbjct: 60  ELGRGAPALILLQYFYFGLPS-----------------------AGLTLS-SFWAAALAL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  TAA+ +EI+R G+ AV +GQ EAA  +GL    A R ++LPQAMR  +P L    + 
Sbjct: 96  AYCTAAYTSEIIRGGIEAVAQGQNEAAEVIGLNRFDALRFIILPQAMRVALPSLLGFSIM 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + + +SL   +   ++VS    I + T + + ++ +   +Y ++     L +  L  K+A
Sbjct: 156 MFQAASLCFTIALPEIVSRASAIGSSTFEYMPVLTLAGLMYAAVCAPATLGVAALEKKLA 215


>gi|317498348|ref|ZP_07956645.1| binding-protein-dependent transport system inner membrane component
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894370|gb|EFV16555.1| binding-protein-dependent transport system inner membrane component
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 218

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 10/129 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+ AEI RSG+ A+P+GQ EAA  LG    +    ++LPQ ++ I P L S+
Sbjct: 94  IGFSLNYAAYFAEIYRSGIQAIPKGQYEAAKVLGFNRSQTFFKIILPQVVKIITPSLGSE 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SLA  +G  ++  V     NQ  ++  +      IYL ++ +  L MN + +
Sbjct: 154 CMTLVKDTSLAHVIGVMEIYVVA---TNQMARSRGM------IYLVVAGIFYLIMNAIVS 204

Query: 391 KI-ALKEKK 398
           K+ ++ EK+
Sbjct: 205 KVFSVIEKR 213


>gi|119945246|ref|YP_942926.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119863850|gb|ABM03327.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 216

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 78/136 (57%), Gaps = 1/136 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP F++  I LS YT AF++E+ RSG  +VP     A+ +LG+T+ +    + +P 
Sbjct: 82  GHPLSP-FIAGSIILSLYTMAFMSEVFRSGFDSVPTSMRTASRSLGMTYLQTVIHIRVPI 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            MR++ P      L+++K+S+L   +G+ +L+  G  +I++T + + I++     Y  +S
Sbjct: 141 GMRAVFPSWLGVALSVIKDSALVSVIGYMELLRTGEQLISRTQEPLMILIGIGLFYFMIS 200

Query: 379 IMIALFMNRLNAKIAL 394
             ++ +   +  K+A+
Sbjct: 201 YPLSRYGKHVERKMAI 216



 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 45/79 (56%), Gaps = 4/79 (5%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +DS +   IL G +NT +++   ++  TI+G L+G  R  +NK V  +   ++++ R++ 
Sbjct: 10  NDSGF---ILTGILNTIYISVVAIVIGTILGLLIGFLRAESNKSVNLVLGGFLDILRSV- 65

Query: 141 PLVVIFFLYKSVLSVLPIP 159
           PL++   L+ + +  +  P
Sbjct: 66  PLIIQLILFSTYVGAMGHP 84


>gi|307248651|ref|ZP_07530665.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306854862|gb|EFM87051.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 138

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 6/128 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R  +PPL++ 
Sbjct: 11  IGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPLSNT 70

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMIALFM 385
           ++ L K++SLA  V   ++  V   + N +   + +     ++ W F +  L ++ A   
Sbjct: 71  FIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCW-GLFLIQAKLE 129

Query: 386 NRLNAKIA 393
            R N  +A
Sbjct: 130 RRFNRFVA 137


>gi|228477743|ref|ZP_04062372.1| ABC-type amino acid transport permease component [Streptococcus
           salivarius SK126]
 gi|228250632|gb|EEK09843.1| ABC-type amino acid transport permease component [Streptococcus
           salivarius SK126]
          Length = 228

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 1/125 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V+P + + +I  S  T   ++EI+RS L+ V +GQ+EAA A+GLT R+A   ++ PQA++
Sbjct: 96  VNPLYYA-FIIYSLMTTGSLSEIIRSALLTVDKGQLEAAQAIGLTTRQAYLRIVFPQALK 154

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           S +P L +  +N++K +SL   +   D+ ++         Q  E   +   +YL +  +I
Sbjct: 155 SALPNLCNLVINIVKGTSLVFVMTIKDITAIARVEAAYGYQYFESYFVIFILYLIICGII 214

Query: 382 ALFMN 386
            +  N
Sbjct: 215 QVLFN 219


>gi|70729566|ref|YP_259304.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68343865|gb|AAY91471.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 239

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 5/153 (3%)

Query: 231 GLP---TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           GLP   TL++I    Q+   K +LG   + G   ++  F++  IA S   AAF +EI  +
Sbjct: 68  GLPELLTLLIIYYGCQIAAQK-ILGALGYPGEVAIN-TFVAAMIAFSLVFAAFSSEIWLA 125

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
               +P+GQ EAA AL L+ R     VLLPQ  R  +P L++ +L+LLK++SL   +   
Sbjct: 126 AFKTLPKGQYEAARALSLSRRTTFNRVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLV 185

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           DL+      ++ T + +    +  F YL  S +
Sbjct: 186 DLMRQTNLAVSVTKEPMLFYSVACFGYLFFSAL 218


>gi|148257735|ref|YP_001242320.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp.
           BTAi1]
 gi|146409908|gb|ABQ38414.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 536

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           C  A FIAE++RSG++ V RGQ+ A  ALG+T     R ++ PQA+R++IP   ++ ++ 
Sbjct: 95  CNEAPFIAEMLRSGVLGVDRGQLLAGQALGMTPGVLMRRIIAPQAIRTMIPAFGNEAVSA 154

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LKNSSLA  +   +L      + + T     I      IYL L+  I++  
Sbjct: 155 LKNSSLASVIAVQELTLRSTQLASSTFDFFSIFFASGLIYLVLTGAISVIQ 205


>gi|310766634|gb|ADP11584.1| Putative amino-acid transport system permease protein [Erwinia sp.
           Ejp617]
          Length = 227

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 74/128 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  +    A+ +EI+R+ L++VP+GQ EAA ++G++  +  R +++PQA R  +P
Sbjct: 89  FPAAVIGFTLNIGAYTSEIIRATLLSVPKGQWEAAHSIGMSWSQTLRRIVMPQAARVAVP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ ++ L+K++SLA  +   +L      I   T Q + +      IYL LS +++   
Sbjct: 149 PLSNTFIALVKDTSLASVITVPELFLAAQRIAAVTYQPLILYTEAAIIYLLLSSVLSALQ 208

Query: 386 NRLNAKIA 393
            RL  ++A
Sbjct: 209 ARLEKRLA 216


>gi|304407617|ref|ZP_07389269.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304343568|gb|EFM09410.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 261

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 72/136 (52%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T +P    + +  S ++ A+I+E++R  ++AV RGQ EAA A+G+   +A   ++LPQA+
Sbjct: 93  TRTPALFFVILTYSLHSGAYISEVIRGAVMAVDRGQAEAAYAVGMNGFQAFSRIVLPQAI 152

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
              IP   +  +  LK++SLA  +G  D+     TI   + + IE  L    +Y  +S  
Sbjct: 153 SLSIPVFGNVVIANLKDTSLAFTLGILDISGKAKTIGTLSQRFIETYLSLAVLYFIISFA 212

Query: 381 IALFMNRLNAKIALKE 396
           +    +RL  ++   E
Sbjct: 213 LQKLFDRLEKRMLRHE 228


>gi|261337915|ref|ZP_05965799.1| glutamate permease [Bifidobacterium gallicum DSM 20093]
 gi|270277399|gb|EFA23253.1| glutamate permease [Bifidobacterium gallicum DSM 20093]
          Length = 225

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 44/67 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS YTAAF+ E +RSG+  VP GQ EA  ALGL   ++  L++LPQA R  + PL + 
Sbjct: 98  VGLSLYTAAFVCESLRSGINTVPLGQAEAGRALGLNFFQSATLIILPQAFRGSVAPLGNT 157

Query: 331 YLNLLKN 337
            + LLKN
Sbjct: 158 LIALLKN 164


>gi|209517852|ref|ZP_03266686.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501685|gb|EEA01707.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 229

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 67/133 (50%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L     A+  E  R   +AVPRGQ+EA  A G++ R+    +L PQ MR  +P
Sbjct: 94  FLAGVITLGFIYGAYFTETFRGAFLAVPRGQIEAGFAYGMSARRVFTRILFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  L+K ++L   +G AD+V         T       L    IYL+++ +  L +
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTQSFFFFTLATGAIYLAITTISNLVL 213

Query: 386 NRLNAKIALKEKK 398
           NRL  + ++  ++
Sbjct: 214 NRLEKRYSIGVRR 226


>gi|153814547|ref|ZP_01967215.1| hypothetical protein RUMTOR_00761 [Ruminococcus torques ATCC 27756]
 gi|317500589|ref|ZP_07958810.1| hypothetical protein HMPREF1026_00753 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089310|ref|ZP_08338211.1| hypothetical protein HMPREF1025_01794 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848041|gb|EDK24959.1| hypothetical protein RUMTOR_00761 [Ruminococcus torques ATCC 27756]
 gi|316898022|gb|EFV20072.1| hypothetical protein HMPREF1026_00753 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330405491|gb|EGG85023.1| hypothetical protein HMPREF1025_01794 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 228

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 94/180 (52%), Gaps = 12/180 (6%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           PL Y++  +++   G P ++ + + Y   F   V+G  N I G   +  F++  +A    
Sbjct: 50  PLSYLTKIIVWIIRGTPLMIQLLIIY--FFPGLVMG--NNIWGGGEAGRFLAAAVAFIFN 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            A + +EI R G+  VP GQ EA + LG+T  +    V L Q ++ I+PP++++ + L+K
Sbjct: 106 YACYFSEIYRGGIQGVPHGQEEAGLVLGMTRSQIFFKVTLLQMVKRIVPPMSNEIITLVK 165

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI----YLSLSIMIALFMNRLNAKI 392
           ++SLA  +   +++  G   +  + Q I  ++  +F     YL  + ++ + + RL  K+
Sbjct: 166 DTSLARIIALQEIIWAGQAFLKGS-QGIAGVIWPLFFTAVYYLIFNGILTVLLGRLEKKL 224


>gi|330900315|gb|EGH31734.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 175

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 11/117 (9%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y   F  P LG            +  S  + LS Y  A++ E+ R+GL+++
Sbjct: 68  PILVLILLIY---FALPGLG--------IRLDKLASFIVTLSLYAGAYLTEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA A+   +L
Sbjct: 117 HKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPEL 173


>gi|325832049|ref|ZP_08165146.1| ABC transporter, permease protein [Eggerthella sp. HGA1]
 gi|325486370|gb|EGC88822.1| ABC transporter, permease protein [Eggerthella sp. HGA1]
          Length = 370

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 51/70 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+  Y   +I+E+VRSG+ ++ RGQ EAA + G ++ ++  +++LPQA+R I+PPL  Q
Sbjct: 98  LAIGIYHGGYISEVVRSGIGSIHRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQ 157

Query: 331 YLNLLKNSSL 340
             NL+KN+S+
Sbjct: 158 AANLVKNTSV 167


>gi|306833383|ref|ZP_07466510.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424153|gb|EFM27292.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 213

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +    ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|149912071|ref|ZP_01900662.1| amino acid ABC transproter, permease protein [Moritella sp. PE36]
 gi|149804867|gb|EDM64904.1| amino acid ABC transproter, permease protein [Moritella sp. PE36]
          Length = 189

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 84/152 (55%), Gaps = 17/152 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKP 249
           VF+ ++ I L++      R F       L +L+IS F   G P LV L  L Y L    P
Sbjct: 7   VFALIIAIGLAVV-----RTFKVPVLNQLAMLFISFFR--GTPLLVQLFLLYYGLPRVFP 59

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L   +          F +  I L+ + AA+ AE +R+ ++AV + QMEAA+++G+T  +
Sbjct: 60  ILIHMD---------AFTASVIGLTLHFAAYKAESIRAAIMAVDKSQMEAALSIGMTTSQ 110

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           A R ++LPQA R   P L + +++++K++SLA
Sbjct: 111 AMRRIVLPQAARIATPSLMNYFIDMIKSTSLA 142


>gi|167766390|ref|ZP_02438443.1| hypothetical protein CLOSS21_00895 [Clostridium sp. SS2/1]
 gi|167711799|gb|EDS22378.1| hypothetical protein CLOSS21_00895 [Clostridium sp. SS2/1]
 gi|291560833|emb|CBL39633.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SSC/2]
          Length = 218

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 10/129 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+ AEI RSG+ A+P+GQ EAA  LG    +    ++LPQ ++ I P L S+
Sbjct: 94  IGFSLNYAAYFAEIYRSGIQAIPKGQYEAAKVLGFNRSQTFFKIILPQVVKIITPSLGSE 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SLA  +G  ++  V     NQ  ++  +      IYL ++ +  L MN + +
Sbjct: 154 CMTLVKDTSLAHVIGVMEIYVVA---TNQMARSRGM------IYLVVAGIFYLIMNAIVS 204

Query: 391 KI-ALKEKK 398
           K+ ++ EK+
Sbjct: 205 KVFSVIEKR 213


>gi|149376081|ref|ZP_01893847.1| ABC-type arginine transport system, permease component
           [Marinobacter algicola DG893]
 gi|149359718|gb|EDM48176.1| ABC-type arginine transport system, permease component
           [Marinobacter algicola DG893]
          Length = 234

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 30/216 (13%)

Query: 192 FSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLH- 245
           FS  L +VL L   + +LS     K+  A+ +    T LI G+P LV++ L Y   Q+  
Sbjct: 24  FSLALALVLGLIGASAKLS-----KSRVAIGIATTYTTLIRGVPDLVMMLLFYYGGQVAV 78

Query: 246 ----------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                     +D     QF+          F+S  I +     A++AE  R   +AV  G
Sbjct: 79  NNLSDYLYDAYDIDFFFQFD---------PFISGVITIGLIFGAYMAETFRGAFLAVESG 129

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA A G +  +    ++LPQ +R  +P + + +  LLK ++L   +G  D+V V   
Sbjct: 130 QIEAARAYGFSRWRTFHRIILPQMLRHALPGIGNNWQVLLKTTALVSIIGLTDMVRVAEE 189

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                       +   F+YLSL+    LF+  LN +
Sbjct: 190 AAKAERMPFHFFIPVAFVYLSLTAGSELFIKWLNKR 225


>gi|119718791|ref|YP_925756.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardioides sp. JS614]
 gi|119539452|gb|ABL84069.1| amino acid ABC transporter membrane protein, PAAT family
           [Nocardioides sp. JS614]
          Length = 241

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 76/130 (58%), Gaps = 9/130 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL     A++AE++R+G+ +V   Q+ +A ALGL+  +A R V+LPQ +R ++PPL + +
Sbjct: 114 ALVLSYGAYVAEVIRAGIDSVHPSQVASAEALGLSRAQAMRFVVLPQGVRRVVPPLINDF 173

Query: 332 LNLLKNSSLAVAVG-FADLVSV---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++L K+++L  AVG F  L +    G    N T       L+    +++L+I IA F + 
Sbjct: 174 VSLQKDTALVGAVGVFESLFAAQDYGNFNFNYTP-----YLVTAAFFVALTIPIARFTDW 228

Query: 388 LNAKIALKEK 397
           +  ++  +E+
Sbjct: 229 MGRRMMERER 238


>gi|331017120|gb|EGH97176.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 159

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 17/155 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT++  A   +   +L I + +   R SRH+  +   ALP  YI  F   G P LV + 
Sbjct: 18  TLTLELVAIAVIAGLILAIPMGI--ARASRHWPVR---ALPYAYI--FFFRGTPLLVQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L Y        L QF+ +    + P     F    + ++ +TAA+IAEI+R  + AVP G
Sbjct: 71  LVYY------GLAQFDAVRQGPLWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPVG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++EAA ALG++  KA   ++LP+A R  +P  +++
Sbjct: 125 EVEAARALGMSKWKALFYIVLPRAARIGLPAYSNE 159


>gi|330432866|gb|AEC17925.1| glutamine ABC transporter permease protein [Gallibacterium anatis
           UMN179]
          Length = 220

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 32/209 (15%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +F  ++GI ++    RL R+F +   +  +  PLL +     FGL      A  + LH +
Sbjct: 35  IFGTLMGIAMTS-KNRLIRYFCQIYLEIVRVTPLLALLFVSYFGL------AKWFNLHLN 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             ++  F FI   T                 A + ++VR  + ++ R Q E+A+ALGL+ 
Sbjct: 88  SELVCIFVFIFWGT-----------------AEMGDLVRGAITSIDRHQSESALALGLSK 130

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R +LLP +++  +PP+ + +  ++K SSLA+ +G  +++ VG  II  +  A+   
Sbjct: 131 AQTFRYILLPLSVKRALPPVINLFTRMVKTSSLAMLIGTLEVIKVGQQIIETSLFAMPTA 190

Query: 368 LIW-----MFIYLSLSIMIALFMNRLNAK 391
             W     M +Y  +   ++ F  RL  K
Sbjct: 191 SFWIYGLIMLMYFVICYPLSWFAGRLEKK 219



 Score = 40.8 bits (94), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +++F  +  + I GTL+G    S N+L+ + C++Y+E+ R  P L ++F  
Sbjct: 15  LLEGLGLTIYISFVAIFFSAIFGTLMGIAMTSKNRLIRYFCQIYLEIVRVTPLLALLFVS 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|307262089|ref|ZP_07543743.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868268|gb|EFN00091.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 238

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 108/211 (51%), Gaps = 25/211 (11%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 96  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI- 366
            +  R ++ PQA+R  +PPL++ ++ L K++SLA  V   ++  V   + N +   + + 
Sbjct: 148 MQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVY 207

Query: 367 ----ILIWMFIYLSLSIMIALFMNRLNAKIA 393
               ++ W F ++ L ++ A    R N  +A
Sbjct: 208 IEAGLIYWCFCWV-LFLIQAKLERRFNCFVA 237


>gi|284044553|ref|YP_003394893.1| polar amino acid ABC transporter inner membrane subunit
           [Conexibacter woesei DSM 14684]
 gi|283948774|gb|ADB51518.1| polar amino acid ABC transporter, inner membrane subunit
           [Conexibacter woesei DSM 14684]
          Length = 279

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 9/169 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL + T ++ G+PT++L+   Y + F  P L     + G    P  +    AL    +A+
Sbjct: 106 LLAVYTDVLRGIPTILLV---YLVGFGIPALA----LNGLPTDPVVLG-GAALVLTYSAY 157

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+ R+GL +V   Q  AA+A+GL   +A R V+LPQA+R +IPPL + +++L K+ +L
Sbjct: 158 VAEVYRAGLDSVHPSQRAAALAVGLNRVQALRFVVLPQAVRRVIPPLLNDFISLQKDVAL 217

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
              +G  +   V     +       +I     +Y+ +++ +A F++R+ 
Sbjct: 218 ISVLGPLEAFRVAQIEASSNFNYTPLIAA-ALLYICVTVPLARFVDRMQ 265


>gi|116751319|ref|YP_848006.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116700383|gb|ABK19571.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 222

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 76/125 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L   ++A+ ++I R  ++++P GQ++AA ALG++  KA   V+LPQA+R  IP  +++
Sbjct: 94  IVLGSISSAYQSQIFRGAILSLPEGQLKAARALGMSDAKAVFFVILPQALRLSIPGWSNE 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           Y  +LK+S++  A+G A++++    +  +T Q + + +    IYL L+      +  L +
Sbjct: 154 YSIVLKDSAVTYALGVAEIMARTHFVATRTYQHLPLYMAAGAIYLLLTYAGVKGLRLLES 213

Query: 391 KIALK 395
           K+ +K
Sbjct: 214 KVRIK 218


>gi|288905199|ref|YP_003430421.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|306831269|ref|ZP_07464429.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978173|ref|YP_004287889.1| polar amino acid ABC transporter membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288731925|emb|CBI13490.1| Putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
 gi|304426505|gb|EFM29617.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178101|emb|CBZ48145.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 213

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +    ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|262038365|ref|ZP_06011742.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Leptotrichia goodfellowii F0264]
 gi|261747583|gb|EEY35045.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Leptotrichia goodfellowii F0264]
          Length = 523

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 6/142 (4%)

Query: 256 FIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           F G S V     SP   +L+I +S  T A++ EI+R G+ ++ +GQ EAA A+G+TH + 
Sbjct: 363 FYGSSQVLNWNLSPLGAALFI-VSINTGAYMCEIIRGGIDSIDKGQFEAAQAIGMTHFQM 421

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + ++ PQ  R I+P + ++++  +K++S+   +   +L  V  ++     +  E+ +I 
Sbjct: 422 MKNIIFPQVFRIILPSIGNEFIINIKDTSVLSVISVTELFFVSKSVAGTYSKYYEVFIIT 481

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             IY  L+  ++  +  +  K+
Sbjct: 482 CVIYFFLTFTLSALLKYVEKKM 503


>gi|225386717|ref|ZP_03756481.1| hypothetical protein CLOSTASPAR_00465 [Clostridium asparagiforme
           DSM 15981]
 gi|225047195|gb|EEG57441.1| hypothetical protein CLOSTASPAR_00465 [Clostridium asparagiforme
           DSM 15981]
          Length = 223

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 60/105 (57%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T A +AEI+R GL  +P+GQ E+A + G +  +    ++LPQ  +SIIP + SQ 
Sbjct: 94  ACTLFTTAVMAEIIRGGLNGIPKGQFESAASQGFSFFQTLFYIVLPQTYKSIIPAMLSQV 153

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           + ++K++S    V  A+ +     ++ +      II+++ FI L 
Sbjct: 154 ITVIKDTSFLKVVDIAEFMRNSYVVMGKLSAPAHIIMLYSFIALC 198


>gi|27378209|ref|NP_769738.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351356|dbj|BAC48363.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 231

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 15/208 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D SIVL    +L + GL F   ++   A  FV   +LG  L+L      +HF       +
Sbjct: 5   DFSIVLQAWPYLWS-GLLF---SLALTAVAFVVGMILGTCLALL-----QHFEVPVIGKV 55

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              YI+  LI  +P   LI + +   F  P VLG  +  G         + +I    + A
Sbjct: 56  VRGYIA--LIRSIP---LILVLFWFFFLVPIVLGHLSGNGRPIPIGATWTAFITFGLFEA 110

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI+R GL AV RGQ EA  AL L+  +  R V+LPQ +R   P + SQ + L +++
Sbjct: 111 AYYSEIIRVGLRAVNRGQFEACQALALSTFETYRSVILPQVLRVASPIILSQTIILFQDT 170

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEI 366
           SL   +   DL+     +    G+ +E+
Sbjct: 171 SLVYVLSLTDLLGAASKLAQLNGRLVEM 198


>gi|254250415|ref|ZP_04943734.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124879549|gb|EAY66905.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 244

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 74/127 (58%), Gaps = 1/127 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +GG+ ++P F+   I +S +  AF AE +R+GL AVPR  +EAA +LG + R+    V L
Sbjct: 103 LGGNPLTP-FIWSVIVISLHKGAFHAEALRAGLEAVPRATLEAAQSLGYSRRQRLWHVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q    +E++++ +  + +
Sbjct: 162 PLAVRFALPALVNNLVDLVKMTTVASAIAVGDVTYASIMIWTQRDNVLELMILILLFFGA 221

Query: 377 LSIMIAL 383
           L+  + L
Sbjct: 222 LTFTVNL 228


>gi|119356996|ref|YP_911640.1| polar amino acid ABC transporter, inner membrane subunit
           [Chlorobium phaeobacteroides DSM 266]
 gi|119354345|gb|ABL65216.1| amino acid ABC transporter membrane protein, PAAT family
           [Chlorobium phaeobacteroides DSM 266]
          Length = 340

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 19/218 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           + T   I VFS VLG  L       R+SR+   +    +   YIS  ++ G P LV + L
Sbjct: 134 LKTTVIISVFSTVLGTFLGAMICFMRMSRN---RLLSVIAKSYIS--ILRGTPVLVFLML 188

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + + F               ++P  +S+ IA     AA++AEI R+G+ ++ +GQ EA 
Sbjct: 189 MFYVVF-----------ASVDINPVIVSV-IAFGMNFAAYVAEIYRAGINSIDKGQAEAG 236

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IA+G T       ++LPQ +  I+P    ++++L+K +S+   +   DL      I ++T
Sbjct: 237 IAMGFTKVNTFLFIILPQTVLRILPVYKGEFISLVKMTSVVGYIAVQDLTKASDIIRSRT 296

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             A   +++   +Y  +S ++ LF+  +      K K+
Sbjct: 297 FDAFFPLVMVAILYFCISWVLMLFLEYVERLADPKSKR 334


>gi|261407769|ref|YP_003244010.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261284232|gb|ACX66203.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 219

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 6/111 (5%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV+G++       V   F++  +A     AA+ AEI R GL+A+ +GQ EA+  LGL   
Sbjct: 80  PVIGEY------LVLDRFVAACLAFVLNYAAYFAEIFRGGLLAIDKGQYEASKVLGLNRW 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           + T  V+LPQ  R  +P ++++ + L+K+++L  AV   +L+    T +N+
Sbjct: 134 QTTTKVILPQMFRVALPAVSNESITLVKDTALLYAVAVPELLHFAYTAVNR 184


>gi|77460511|ref|YP_350018.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77384514|gb|ABA76027.1| L-arginine ABC transporter membrane protein / L-ornithine ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 232

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  + +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLF 216


>gi|227819411|ref|YP_002823382.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227338410|gb|ACP22629.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 219

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 20/215 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +  +  I + S V+G VL +F   L+  +  +  K L   Y  T  I G P LVL+   Y
Sbjct: 20  LGVSISISLLSIVVGTVLGVFVG-LALTYGYRPVKWLVRGY--TDFIRGTPVLVLVLASY 76

Query: 243 QLHFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            +               STV  +   F +  +AL+ + ++ + E+VR  L ++P+GQ EA
Sbjct: 77  YVL--------------STVGIDLGPFQAGILALAVFCSSHVGELVRGALQSIPKGQTEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A+GLT  +    VL PQA+R  +P   +    ++K S+L   +G  +L+     +I++
Sbjct: 123 AKAIGLTFPQTFAYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVGELLLRTQEVISR 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           T  ++E      F+Y  ++  I  F   +  K A+
Sbjct: 183 TFMSLEFYFFAGFLYFVINYGIERFGRYVERKTAV 217


>gi|332041715|gb|EGI78067.1| polar amino acid ABC transporter inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 222

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 77/131 (58%), Gaps = 8/131 (6%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I    + AA+ +EI+R+G+ ++PRGQ+ A  A+G+++ +  + V+LPQA R+++P L
Sbjct: 94  SAVITFIAFEAAYFSEIMRAGIQSIPRGQVFAGYAMGMSYAQNMKFVILPQAFRNMLPVL 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQA-IEIILIWMFIYLSLSIMIAL 383
            +Q + L +++SL   +   DL+   +V G  ++   +A I   L++  I  SLS  +  
Sbjct: 154 MTQTIILFQDTSLVYIITAHDLLHGFTVAGNNLSHPREAYILAALLYFVICYSLSNAV-- 211

Query: 384 FMNRLNAKIAL 394
              RL  KIA+
Sbjct: 212 --KRLQQKIAI 220


>gi|227833321|ref|YP_002835028.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184305|ref|ZP_06043726.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454337|gb|ACP33090.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 228

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 1/122 (0%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE +RSG+  V  GQ EAA +LGL+  +    ++ PQA+R+ I PL +  + L 
Sbjct: 107 YTSAFVAESLRSGINTVDFGQAEAARSLGLSFSQTFSTIIFPQAVRAAIVPLGNTLIALT 166

Query: 336 KNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           KN+++A A+G A+  + +  TI     Q   I  I+   ++ L++ + + + +L+  +A+
Sbjct: 167 KNTTIASAIGVAEASLLMKSTIEMHASQLFLIFFIFAAGFIILTLPMGVGLGKLSETLAV 226

Query: 395 KE 396
           K+
Sbjct: 227 KK 228



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF----LYKS 151
           TFW A    I A ++GT++ A R+S   ++ WI   Y+   RN P  ++I F    LY++
Sbjct: 23  TFWSA----IGAMLLGTILTAMRVSPVGILRWIATTYITTVRNTPLTLIILFCSFGLYQN 78

Query: 152 VLSVLPIPDHSIVL 165
           +   L   D S  L
Sbjct: 79  LGLTLASKDSSTFL 92


>gi|116248749|ref|YP_764590.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253399|emb|CAK11787.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 219

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +I G P LVL+   Y  +    V        G  + P F +  +AL+ + ++ + EIV
Sbjct: 60  TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAIFCSSHVGEIV 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G
Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+L+     II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIINYGIEHFGKYVERKTAL 217


>gi|295699403|ref|YP_003607296.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438616|gb|ADG17785.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 218

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQ
Sbjct: 80  GIDVSP-WAAATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++  + P     + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++ 
Sbjct: 139 ALKIAVAPTVGFLVQVVKSTALASIIGFIELTKTGTMITNAAFRPFPIYGMVAMIYFAMC 198

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +  +   L  +  + + +
Sbjct: 199 FPLTWYARVLEKRQKVGQHR 218


>gi|146338610|ref|YP_001203658.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp.
           ORS278]
 gi|146191416|emb|CAL75421.1| Putative ABC transporter (ATP-binding/permease protein)
           [Bradyrhizobium sp. ORS278]
          Length = 542

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 62/111 (55%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           C  A FIAE++RSG++ V RGQ+ A  ALG+T     R ++ PQA+R++IP   ++ ++ 
Sbjct: 95  CNEAPFIAEMLRSGVLGVDRGQLLAGQALGMTPGVLMRRIIAPQAIRTMIPAFGNEAVSA 154

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LKNSSLA  +   +L      + + T     I      +YL L+  I++  
Sbjct: 155 LKNSSLASVIAVQELTLRSTQLASSTFDFFSIFFASGLLYLGLTGAISVIQ 205


>gi|116252500|ref|YP_768338.1| transmembrane permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115257148|emb|CAK08243.1| putative transmembrane permease component of ABC transporter
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 268

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 18/191 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L +     + + +  +G+ +  F   L +   EK  +    +Y + F   GLP L+ +  
Sbjct: 51  LGLQVTVSVAIVTLPIGLAIG-FLVALGQQSEEKPLRLAAGIYTTIFR--GLPELLTL-- 105

Query: 241 KYQLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            + +++   +L Q    F+G      E   F++  IALS   +A+ +E++ S   A+P+G
Sbjct: 106 -FIIYYGMQMLIQSLLTFVGYDGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFHAIPKG 164

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  ALGL   +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD       
Sbjct: 165 QYEAGDALGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLAD------- 217

Query: 356 IINQTGQAIEI 366
           I+ QT  A+ +
Sbjct: 218 ILRQTSVAVRV 228


>gi|153952019|ref|YP_001398496.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939465|gb|ABS44206.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. doylei 269.97]
          Length = 233

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLSLICLSVEETLIPSFACAIVGLSFLGGSYMAESLRAGFEAIRKHQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 82  DSSYATAILVGFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D  +  A    F+   WL    +F G+I + IIG           K++  IC++Y+E  R
Sbjct: 2   DFDFILAQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSR 61

Query: 138 NIPPLVVIFFLYKSV 152
           N P L+ +FFLY ++
Sbjct: 62  NTPLLIQLFFLYYAL 76


>gi|326789760|ref|YP_004307581.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326540524|gb|ADZ82383.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 256

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 50/68 (73%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AEIVR G+I+V +GQ EAA A+G+ H +  R V+LPQ +R+I+P   ++++
Sbjct: 108 VSINTGAYMAEIVRGGIISVDKGQFEAAQAIGMNHLQTMRHVVLPQVIRNILPATGNEFV 167

Query: 333 NLLKNSSL 340
             +K++S+
Sbjct: 168 INIKDTSV 175


>gi|260461849|ref|ZP_05810095.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785374|ref|YP_004144850.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032490|gb|EEW33755.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171262|gb|ADV14800.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 253

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 54/78 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+S   A+++AE++R+GL +V +GQ EAA + GL + ++ + ++LPQA+ +++P L SQ
Sbjct: 127 VAMSIIAASYLAEVIRAGLYSVDKGQWEAAASTGLNNWQSFKWIILPQAISNMMPALLSQ 186

Query: 331 YLNLLKNSSLAVAVGFAD 348
            + L K +SL   VG  D
Sbjct: 187 VIMLFKTTSLVSMVGVID 204


>gi|209547537|ref|YP_002279455.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538781|gb|ACI58715.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +I G P LVL+   Y  +    V        G  + P F +  +AL+ + ++ + EIV
Sbjct: 60  TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAIFCSSHVGEIV 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G
Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+L+     II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217


>gi|15618116|ref|NP_224401.1| amino acid ABC transporter ATPase [Chlamydophila pneumoniae CWL029]
 gi|16752848|ref|NP_445118.1| amino acid ABC transporter, permease protein [Chlamydophila
           pneumoniae AR39]
 gi|33241530|ref|NP_876471.1| ABC amino acid transporter permease [Chlamydophila pneumoniae
           TW-183]
 gi|4376462|gb|AAD18345.1| ABC Amino Acid Transporter Permease [Chlamydophila pneumoniae
           CWL029]
 gi|7189487|gb|AAF38393.1| amino acid ABC transporter, permease protein [Chlamydophila
           pneumoniae AR39]
 gi|33236038|gb|AAP98128.1| ABC amino acid transporter permease [Chlamydophila pneumoniae
           TW-183]
          Length = 217

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  +AA++AE +R G+ ++  GQ E+A+ LG    +    ++ PQ  ++I+P LT++
Sbjct: 92  IALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K SS+ + VG  +L  V   I+++    +E+ LI   +Y  ++   +  ++RL+ 
Sbjct: 152 FVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTTSFSC-ISRLSE 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|27379575|ref|NP_771104.1| ABC transporter permease ATP-binding protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27352727|dbj|BAC49729.1| blr4464 [Bradyrhizobium japonicum USDA 110]
          Length = 540

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 62/111 (55%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           C  A FIAE++R+G++ V RGQ+ A  ALG+T R     V+ PQA+R++IP   ++ ++ 
Sbjct: 95  CNEAPFIAEMLRAGVLGVDRGQVTAGQALGMTPRILMWRVIAPQAIRTMIPAFGNEAVSA 154

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           LKNSSLA  V   +L      + + T     I      +YL L+  I++  
Sbjct: 155 LKNSSLASVVAVQELTLRSTQLASSTFDFFSIFFASGLLYLVLTATISVIQ 205


>gi|222823696|ref|YP_002575270.1| ABC transporter, His/Glu/Gln/Arg/opine family (permease protein)
           [Campylobacter lari RM2100]
 gi|222538918|gb|ACM64019.1| conserved hypothetical protein, ABC transporter,
           His/Glu/Gln/Arg/opine family (permease protein)
           [Campylobacter lari RM2100]
          Length = 215

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 72/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS    +++AE +R+G+ AV + Q E+ ++LGL+  +  R +++PQA+   +P +++ 
Sbjct: 91  IGLSFLGGSYMAESLRAGMEAVKKQQYESGLSLGLSKWQNFRYIIMPQALGIAMPSISAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +S+   +  ADLV V   +I    ++ E +   +  YL L + ++L +NR+  
Sbjct: 151 IIFLLKETSVVSIIALADLVYVAKDLIGLYYKSNEALFALVLCYLILILPLSLVLNRIEK 210

Query: 391 KI 392
           ++
Sbjct: 211 RL 212


>gi|259502845|ref|ZP_05745747.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|312870480|ref|ZP_07730600.1| arginine ABC transporter, permease protein ArtQ [Lactobacillus oris
           PB013-T2-3]
 gi|259169212|gb|EEW53707.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|311094037|gb|EFQ52361.1| arginine ABC transporter, permease protein ArtQ [Lactobacillus oris
           PB013-T2-3]
          Length = 213

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 49/76 (64%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G  A+  GQ EAA  L L++ +  R +++PQ ++ +IP + ++ +NL+K+
Sbjct: 96  AAYFAEIFRGGFQAIDEGQFEAARVLRLSYWQTLRKIVIPQVVKIVIPSIGNEVINLVKD 155

Query: 338 SSLAVAVGFADLVSVG 353
           SSL   +G  DL+  G
Sbjct: 156 SSLVYVIGLGDLLRAG 171


>gi|153855979|ref|ZP_01996920.1| hypothetical protein DORLON_02945 [Dorea longicatena DSM 13814]
 gi|149751779|gb|EDM61710.1| hypothetical protein DORLON_02945 [Dorea longicatena DSM 13814]
          Length = 220

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S    AF++E +R  L++V  GQ EAA +LG+T+ +    +++PQA+R  +PPL + 
Sbjct: 95  VVMSFNMGAFMSESIRGALLSVDEGQKEAAYSLGMTNFQLVTRIVIPQAVRVALPPLFND 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+K +SLA  +G  D++        +T +  EI    M +Y  +  ++ +    L  
Sbjct: 155 IINLIKMTSLAFMLGVPDIMGAAKIEGARTFRYFEIYAAVMLVYWLIIFVLGILHKLLEK 214

Query: 391 KIA 393
           K A
Sbjct: 215 KCA 217


>gi|52424276|ref|YP_087413.1| arginine transporter permease subunit ArtQ [Mannheimia
           succiniciproducens MBEL55E]
 gi|52306328|gb|AAU36828.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 223

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++        SP F+   IAL+   AA+ ++ +
Sbjct: 55  LLRGLPEILVVLLIYFGSTELVEKLTGEY-----IEFSP-FLCGVIALAIIFAAYASQTL 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P GQ E+  ALGL+       ++LPQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 109 RGAIQAIPLGQWESGAALGLSRGYTFVNIILPQVWRHALPGLSNQWLVLLKDTALVSLIG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     +   T Q          +YL ++++   FM +L  +    E+
Sbjct: 169 VDDLMRQASLVNTNTHQPFTWYSFAALLYLIITLVSQFFMRKLEMRFTRFER 220


>gi|227873127|ref|ZP_03991419.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227841021|gb|EEJ51359.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 216

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 72/126 (57%), Gaps = 1/126 (0%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           ++YI      AA+ AEI RSG+ ++ RGQ EAA  LG +  +    ++LPQ  + I+P +
Sbjct: 89  AVYIGFILNYAAYFAEIYRSGIQSMDRGQYEAAEILGYSKMQCFFRIILPQVWKKILPSI 148

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T++ ++L+K++SLA ++   ++ +    + +       +I+  +  Y+  + ++A  M +
Sbjct: 149 TNEVISLVKDTSLAFSISVMEMFTQAKALSSSQSSMFPLIMAGVLYYI-FNFVVAFIMEQ 207

Query: 388 LNAKIA 393
           +  K+A
Sbjct: 208 MEKKMA 213


>gi|213417551|ref|ZP_03350693.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 177

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R
Sbjct: 40  VSP-FLCGVIALSLLYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWR 98

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++ 
Sbjct: 99  HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLIS 158

Query: 382 ALFMNRLNAKIALKEKK 398
              + R++ +    E++
Sbjct: 159 QYILKRIDLRATRFERR 175


>gi|329944506|ref|ZP_08292671.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328530271|gb|EGF57150.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 218

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 56/89 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F S+ +AL   ++ F+ E VRSG+ +V +GQ+EAA ALG+      R ++LPQA+   
Sbjct: 82  PLFWSVIVALIFSSSGFVCETVRSGINSVSKGQIEAARALGMPFGLIIRGIVLPQALART 141

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           I PL + ++  L  SSLA AVG  +L +V
Sbjct: 142 IQPLVNIFIACLIGSSLAAAVGVVELTAV 170


>gi|242241097|ref|YP_002989278.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133154|gb|ACS87456.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 221

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 14/199 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF+LG+ + +    L R +  K  K     Y+  ++I G P LV + L +        
Sbjct: 28  ILSFILGLAVGVIVALL-RLYGPKPLKWFCDFYV--WVIRGTPLLVQLFLIF-------- 76

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              +           F +  I  +    A+ +EIVR  +++VP+GQ  AA +LG+   +A
Sbjct: 77  ---YGLPNAGITLDAFPAALIGFTLNVGAYTSEIVRGAILSVPKGQWNAAYSLGMNGAQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V++PQ++   +PPL++ +++L+K++SLA  +   ++      I++ T + + + +  
Sbjct: 134 IRWVIVPQSVFVSLPPLSNTFISLIKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYVEA 193

Query: 371 MFIYLSLSIMIALFMNRLN 389
             IYL  S  +     RL 
Sbjct: 194 ALIYLLFSTFLGKIQVRLE 212


>gi|210615936|ref|ZP_03290859.1| hypothetical protein CLONEX_03078 [Clostridium nexile DSM 1787]
 gi|210150029|gb|EEA81038.1| hypothetical protein CLONEX_03078 [Clostridium nexile DSM 1787]
          Length = 216

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 110/210 (52%), Gaps = 23/210 (10%)

Query: 189 IFVFSFVL----GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           IF F+ +L    GIV+S    R+S++   +T   +  +YIS  ++ G P ++ +   Y  
Sbjct: 20  IFAFTLILSLPLGIVVSF--GRMSKNVVIRT---IVKVYIS--IMRGTPLILQLMFIY-- 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALS--CYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                  G++ ++    ++PE+M+  + L      AA+ AEI R G+ ++P GQ EAA  
Sbjct: 71  ------FGRY-YVLKMQMTPEWMNTAVILGFVLNYAAYFAEIYRGGIESMPIGQYEAAEI 123

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG T  +    ++ PQ M+ I+P +T++ + L+K++S+A  +   ++ +V   I      
Sbjct: 124 LGYTKVQTFVKIIFPQVMKRILPSITNEVITLVKDTSIAYVLSVQEMFTVAKAISASQAS 183

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +I+  +F Y+  + ++A  M R+  K+
Sbjct: 184 VSPLIIAAVFYYV-FNFIVAFVMERIEKKM 212



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + +FW+    +I +  +G +V  GR+S N ++  I +VY+ + R  P ++ + F+Y
Sbjct: 13  GMIKSFWIFAFTLILSLPLGIVVSFGRMSKNVVIRTIVKVYISIMRGTPLILQLMFIY 70


>gi|312864828|ref|ZP_07725059.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus downei F0415]
 gi|311099955|gb|EFQ58168.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus downei F0415]
          Length = 213

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 1/121 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L     +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIDAIPKGQYEAAKVLKFNQIQTIRYIILPQVVKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+K+SSL   +G  DL+    T  N+   ++  + +   IYL L  ++ L   R+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLESRTASNRDA-SLAPMFVAGAIYLFLVGVVTLASKRIEK 207

Query: 391 K 391
           K
Sbjct: 208 K 208


>gi|227894181|ref|ZP_04011986.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227864011|gb|EEJ71432.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 168

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 1/129 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P + +   A     AA+ AEI R G  ++  GQ EAA  L L   +    +++PQ ++
Sbjct: 35  VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLNRWQTMTKIIIPQVIK 94

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P + ++ +NL+K+SSL   +G  DL+  G   + +    + ++L+ + IYL L  + 
Sbjct: 95  IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLILISVC 153

Query: 382 ALFMNRLNA 390
           A  + +L  
Sbjct: 154 AFILKKLEG 162


>gi|164686605|ref|ZP_02210633.1| hypothetical protein CLOBAR_00197 [Clostridium bartlettii DSM
           16795]
 gi|164604334|gb|EDQ97799.1| hypothetical protein CLOBAR_00197 [Clostridium bartlettii DSM
           16795]
          Length = 252

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 60/91 (65%), Gaps = 1/91 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +   F +++I +S  T A++AEIVR G+I++ +GQ EAA A+G+ H +    V+LPQ
Sbjct: 95  GIDMDRTFAAIFI-VSINTGAYMAEIVRGGIISIDKGQFEAAQAIGMNHIQTMINVVLPQ 153

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +R+I+P   ++++  +K++S+   +G  +L
Sbjct: 154 VIRNILPATGNEFVINIKDTSVLNVIGVTEL 184


>gi|86357910|ref|YP_469802.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282012|gb|ABC91075.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 222

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  EI+R G+ +V +GQ+EA  ALGL      RL++L  A+R+I P LTSQ
Sbjct: 95  IALGINGGAYAIEIIRGGVESVNKGQVEAGFALGLHKADVFRLIVLKPALRAIYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIALF 384
           ++ L   +S+  ++   +L S    I + T ++ E+      IYL + S+M+ +F
Sbjct: 155 FVMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFSVTAIYLVISSLMMGIF 209



 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + T  LA +GMI A  IG L  A R S NKLV      +VE+ RN P LV IFF+Y
Sbjct: 20  GSLGTLGLAVAGMILALAIGILGVAARTSKNKLVQSPVIAFVEIVRNTPFLVQIFFIY 77


>gi|325576796|ref|ZP_08147411.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161002|gb|EGC73120.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 219

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 5/154 (3%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +L  + P+L Q  F + G S +  +   F    I L+    +++AE +R GL AV +GQ+
Sbjct: 58  ELSRNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAIRGGLEAVSKGQI 117

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+A+++GLT  +A R V+ PQA     P + +  L L+K +S+  AV  A+L+ V   +I
Sbjct: 118 ESALSIGLTPFQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVI 177

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  E + + +  YL + + ++LF++ L  +
Sbjct: 178 GLDYKTNEALFLLVVFYLIILLPMSLFISYLERR 211



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  LAF G++ + +IG +         K + W+ + Y+E+ RN P L+ +FFLY
Sbjct: 20  TLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFLY 73


>gi|24636877|sp|Q8RQL5|GLUC_COREF RecName: Full=Glutamate transport system permease protein gluC
 gi|20126699|dbj|BAB88900.1| gluC [Corynebacterium efficiens]
          Length = 228

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 3/123 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE +RSG+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +  + L 
Sbjct: 107 YTSAFVAESLRSGINTVHFGQAEAARSLGLGFSDIFRSIIFPQAVRAAIIPLGNTLIALT 166

Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           KN+++A  + VG A L+ +  TI N       +  I+   ++ L++ + L + +L  K+A
Sbjct: 167 KNTTIASVIGVGEASLL-MKSTIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLAEKMA 225

Query: 394 LKE 396
           +K+
Sbjct: 226 VKK 228


>gi|312963773|ref|ZP_07778244.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311281808|gb|EFQ60418.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 222

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 24/179 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L L   ++Q                       +++ I L  Y+  
Sbjct: 68  PFLVQLFFIFFGLPSLGLKITEWQ--------------------AAVLAMVINLGAYS-- 105

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
              EI+R+G+ A+PRGQ+EAA AL +T  +A R V+L  A+  + P L+SQ + ++  S+
Sbjct: 106 --TEIIRAGIQAIPRGQLEAAAALAMTRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSA 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +   +L      I ++  +A E   +   +YL +++MI   +N +  +  ++  +
Sbjct: 164 VCSQIATEELSFAANFIQSRNFRAFETYALTTLVYLCMALMIRQLLNWIGRRFVMRNSR 222


>gi|261866998|ref|YP_003254920.1| glutamine-binding periplasmic protein/glutamine transport system
           permease [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261412330|gb|ACX81701.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 240

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 111/218 (50%), Gaps = 23/218 (10%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG----KALPLLYISTFLIFGLPTLVLI 238
           +D    + + SF  G+V++L    +        G    + L  +Y+S  +I G P LV I
Sbjct: 34  IDKTIPLAIISFFAGLVIALGVAVIRTMPKSSIGLLVLQLLCRIYVS--IIRGTPMLVQI 91

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              + + +  P +G         + P F +  IA S    A+ +E +R+ ++++P+GQ E
Sbjct: 92  ---FIIFYGLPEVG-------IKLDP-FPTAIIAFSINIGAYASETIRAAILSIPKGQWE 140

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A+ ++G+ + +     ++PQA+R  +PPL++ +++ +K++SLA  V   ++  V   I  
Sbjct: 141 ASYSIGMNYFQTFTRTIMPQALRVSVPPLSNTFISNVKDTSLASLVLVTEMFRVAQNI-- 198

Query: 359 QTGQAIEIILIW---MFIYLSLSIMIALFMNRLNAKIA 393
            T +  E I+I+     IY  + ++++    RL  +++
Sbjct: 199 -TAENYEFIMIYSEAALIYWCICLVLSFAQERLEKRLS 235


>gi|148379137|ref|YP_001253678.1| ABC transporter, permease protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|148288621|emb|CAL82702.1| ABC transporter, permease protein [Clostridium botulinum A str.
           ATCC 3502]
          Length = 221

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 69/127 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+  TA+F+AE +R+ L +V  GQ+EA  ++G+T  +    V+LPQA    +P
Sbjct: 91  FQATVIALTLNTASFMAETLRASLESVDVGQLEACYSMGMTRYQTMMRVVLPQAFVVALP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +Q++ ++K S+L   VG AD+++        + +  E  L    IYL + I +    
Sbjct: 151 SIGNQFIGIIKGSALGFTVGLADIMAKAKMEAALSIRFFEAYLCVTLIYLVIVIFVEKIQ 210

Query: 386 NRLNAKI 392
             L  +I
Sbjct: 211 RLLEKRI 217


>gi|107029118|ref|YP_626213.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686986|ref|YP_840233.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170734709|ref|YP_001773823.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|105898282|gb|ABF81240.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652701|gb|ABK13340.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169820747|gb|ACA95328.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 229

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 2/129 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +++S   +A++ EIVRSGL +V   Q EAA+ L   + K  R V++PQA R I+PP    
Sbjct: 102 VSVSLIASAYLGEIVRSGLESVHPNQREAAVTLNFGYLKMLRYVVVPQAWRVIVPPTFGF 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-IWMFIYLSLSIMIALFMNRLN 389
           ++  +K+++LA  +G  +L S  G ++N  G +  ++    + +Y ++S  ++ F   L 
Sbjct: 162 FVMFIKDTALASQIGVMELTS-AGKVLNDKGFSAGLVYGAILLLYFAMSYPLSRFGKHLE 220

Query: 390 AKIALKEKK 398
             +A    +
Sbjct: 221 KSLAATRNR 229


>gi|303253452|ref|ZP_07339594.1| ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302647696|gb|EFL77910.1| ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
          Length = 153

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 6/128 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R  +PPL++ 
Sbjct: 26  IGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPLSNT 85

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMIALFM 385
           ++ L K++SLA  V   ++  V   + N +   + +     ++ W F +  L ++ A   
Sbjct: 86  FIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCW-GLFLIQAKLE 144

Query: 386 NRLNAKIA 393
            R N  +A
Sbjct: 145 RRFNRFVA 152


>gi|283852207|ref|ZP_06369480.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283572433|gb|EFC20420.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 230

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 1/130 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P   +  I  +  + A+ +E +R GL+++ RGQ+ AA ALG+T       V+LPQA R
Sbjct: 90  VLPPMWAAIIGFALCSGAYQSEYIRGGLLSIKRGQLRAAQALGMTPLTTVTSVVLPQAFR 149

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   ++ + L+K SSLA  +   DL  +G ++   + +  E+ ++    YL+L + +
Sbjct: 150 RALPGCGNEIIYLIKYSSLASIITVNDLTGMGRSLAKSSFRNTEVFVVVGLYYLAL-VTV 208

Query: 382 ALFMNRLNAK 391
           A F+ R   K
Sbjct: 209 ATFVLRAVEK 218


>gi|229814979|ref|ZP_04445317.1| hypothetical protein COLINT_02022 [Collinsella intestinalis DSM
           13280]
 gi|229809466|gb|EEP45230.1| hypothetical protein COLINT_02022 [Collinsella intestinalis DSM
           13280]
          Length = 397

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 71/122 (58%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++ E++R G+ +V  GQMEAA +LGL+  +A R V+ PQ ++  IP L+++ +  +K
Sbjct: 262 STAYMMEVLRGGIESVDAGQMEAARSLGLSQWEAMRKVVFPQGVKFAIPGLSNELVINIK 321

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SS+   +G  DL+    T+        E  L+   +YL L++  +  + RL +++ +K 
Sbjct: 322 DSSVLSVIGTFDLMFATTTVGGIYYAKFEAALVTSVMYLCLTMFASWLLGRLASRLDVKS 381

Query: 397 KK 398
            K
Sbjct: 382 VK 383


>gi|292492727|ref|YP_003528166.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Nitrosococcus halophilus Nc4]
 gi|291581322|gb|ADE15779.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Nitrosococcus halophilus Nc4]
          Length = 214

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 69/116 (59%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AE+VR  + AVP+ Q EAAIAL  T R+    +++PQA+ +++PP  +  + LLK++
Sbjct: 97  AYGAEVVRGAIQAVPQEQREAAIALNFTPRQTLWRIIIPQAIPAMLPPFGNLLIELLKST 156

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L   +  ++L   G  +   T ++ EI  + + +Y  L+ +IA  + RL  K A+
Sbjct: 157 ALVSMITLSELTFQGQMLRASTLRSAEIFALVLVLYFLLAQIIAFIIRRLERKFAV 212


>gi|282881858|ref|ZP_06290509.1| probable amino-acid ABC transporter permease protein [Peptoniphilus
           lacrimalis 315-B]
 gi|300814772|ref|ZP_07095020.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|281298267|gb|EFA90712.1| probable amino-acid ABC transporter permease protein [Peptoniphilus
           lacrimalis 315-B]
 gi|300511159|gb|EFK38411.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 240

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 61/96 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + ++ YI +S  T A+++E+VR G+I++ +GQ EA+ A GL+H +    V+ PQ +R+I+
Sbjct: 97  KILTAYIIVSVNTGAYMSEVVRGGIISIDKGQWEASRASGLSHIQTMLYVIGPQTLRNIL 156

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P   ++++  +K++S+   +G  +L     T+  Q+
Sbjct: 157 PATGNEFVINIKDTSVLNVIGVGELFFAAKTVAGQS 192


>gi|269303067|gb|ACZ33167.1| amino acid ABC transporter, permease protein [Chlamydophila
           pneumoniae LPCoLN]
          Length = 217

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 74/121 (61%), Gaps = 1/121 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  +AA++AE +R G+ ++  GQ E+A+ LG    +    ++ PQ  ++I+P LT++
Sbjct: 92  IALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFIYIIYPQVFKNILPSLTNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K SS+ + VG  +L  V   I+++    +E+ LI   +Y  ++   +  ++RL+ 
Sbjct: 152 FVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTTAFSC-ISRLSE 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|262370797|ref|ZP_06064121.1| histidine transport system permease hisQ [Acinetobacter johnsonii
           SH046]
 gi|262314159|gb|EEY95202.1| histidine transport system permease hisQ [Acinetobacter johnsonii
           SH046]
          Length = 229

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 114/235 (48%), Gaps = 14/235 (5%)

Query: 169 MFLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYI 224
           MFL+  G   P L   T    ++ + S VL I++ LF  + +LSR    +  + +  LY 
Sbjct: 1   MFLSGYG---PVLLSGTWMTIQLALLSLVLSIIIGLFGASAKLSRI---QILRHVATLY- 53

Query: 225 STFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            T LI  +P LV ++ L Y L      + +   +    ++P F++  I L+    A+  E
Sbjct: 54  -TTLIRSVPDLVIMLLLFYSLQLGLNSITESIHMEQIDINP-FVAGVITLAFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R    AVP+GQ+EAA A G+T  +  R VL PQ MR  +P + + +  L+K ++L   
Sbjct: 112 TFRGAFQAVPKGQLEAAYAYGMTPFQVFRRVLFPQMMRFALPGIGNNWQVLIKATALVSL 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  D+V +       + Q     ++   IYL+++ +  L +  L  + +   KK
Sbjct: 172 IGLTDIVKITQDAGRSSMQVFYFSIVAAVIYLAITTLSNLILMWLERRYSAGVKK 226


>gi|257125489|ref|YP_003163603.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049428|gb|ACV38612.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 521

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 109/213 (51%), Gaps = 25/213 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGK----------ALPLLYISTFLIFGLPTLVLIAL 240
           V  F++G+V++LF    S    E+T K           L  +YI+ F   G P +V   +
Sbjct: 306 VVGFLIGLVVALFRHSESET-DEQTQKYKKYGLKFINTLSSVYIAVFR--GTPMIVQSMV 362

Query: 241 KYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            Y        L Q FN      +SP   +L+I +S  T A+++EI+R G+ ++  GQ EA
Sbjct: 363 IYY------GLSQVFNI----NLSPMVAALFI-VSINTGAYMSEIIRGGIDSIDNGQFEA 411

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A+G+T+ +  + ++ PQ  R+I+P + ++ +  +K++S+   +   +L  +  ++   
Sbjct: 412 AKAIGMTNFQLMQSIIFPQMFRNILPMIGNELIVNIKDTSVLNVISVTELFFISKSVAGT 471

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  E+ +I   IY  L+  ++L + ++  +I
Sbjct: 472 YSRYYEVFIITSVIYFFLTFTLSLILKQIEKRI 504


>gi|167824250|ref|ZP_02455721.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 9]
          Length = 250

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204


>gi|153012128|ref|YP_001373338.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151564016|gb|ABS17509.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 220

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 11/162 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P LV      QL +   VL +F  I  S +    + L IA S Y A    E  R+
Sbjct: 61  VIRGIPILV------QLFYIYFVLPEFG-IALSALQAGIIGLGIAYSAYQA----ENFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+  GQ EAA ++G+      R V+LPQA+R I+PP  +  + LLK+SS A A+  A
Sbjct: 110 GIEAIDHGQTEAAQSIGMGWFMTMRRVILPQAVRVILPPYGNIMVMLLKDSSQASAITVA 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +L   G  + + T + + +  +    YL LS+ + + + RL 
Sbjct: 170 ELTLQGQLLASSTFKNMSVYTLVAMFYLCLSLPLMMAVGRLE 211


>gi|321312471|ref|YP_004204758.1| sulfur-containing amino acid ABC transporter permease [Bacillus
           subtilis BSn5]
 gi|320018745|gb|ADV93731.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus
           subtilis BSn5]
          Length = 235

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 69/130 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  M + +ALS    A++ EI+RSG++A+  GQ+EAA ++GLTH +  R V+LPQA+   
Sbjct: 99  PVSMFVIMALSLTAGAYLTEIIRSGILAMDTGQVEAAYSIGLTHSQTFRRVILPQALMVS 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP  T+  +  L  +S+A  V   ++      + +     +E  +    IY  L++++  
Sbjct: 159 IPNFTNLGIGFLHTTSIAAIVAVPEITGTATIVASDNYAFLEAFIGAAIIYWVLTLILES 218

Query: 384 FMNRLNAKIA 393
               L  K A
Sbjct: 219 VNGVLERKAA 228


>gi|238028317|ref|YP_002912548.1| amino acid ABC transporter permease [Burkholderia glumae BGR1]
 gi|237877511|gb|ACR29844.1| Amino acid ABC transporter, permease protein [Burkholderia glumae
           BGR1]
          Length = 229

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%)

Query: 169 MFLNNRG---LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           MFL   G   LS    T+        F+FVLG++ +  A +LSR+   +    L  LY  
Sbjct: 1   MFLQGYGPLILSGTWQTIKLAVLSLAFAFVLGLLGA--AAKLSRN---RITNGLGTLY-- 53

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIA 282
           T LI G+P LVL+ L  Y L      L QF + +    +  + F +  + L     A+  
Sbjct: 54  TTLIRGVPDLVLMLLLFYSLQI---WLNQFTDMMNWDQIDIDPFAAGVLVLGFIYGAYFT 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   ++VPRGQ+EA  A G+++ +    V+ PQ MR  +P + + +  L+K+++L  
Sbjct: 111 ETFRGAFLSVPRGQLEAGAAYGMSNWRVFSRVMFPQMMRFALPGIGNNWQVLVKSTALVS 170

Query: 343 AVGFADLVS 351
            +G AD+V 
Sbjct: 171 IIGLADVVK 179


>gi|213966203|ref|ZP_03394388.1| glutamate ABC transport system, permease protein [Corynebacterium
           amycolatum SK46]
 gi|213951138|gb|EEB62535.1| glutamate ABC transport system, permease protein [Corynebacterium
           amycolatum SK46]
          Length = 220

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 53/87 (60%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   F    +A   YT+ F+AE +R+G+  VP GQ EAA +LGL+  ++ R ++ PQA R
Sbjct: 85  VKQNFRLAVLAFVAYTSCFVAESLRAGINTVPFGQAEAARSLGLSFGQSFRYIIFPQAFR 144

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFAD 348
             I PL +  + L KN+++A  +G A+
Sbjct: 145 GAIVPLGNTLIALTKNTTIASVIGVAE 171


>gi|161524792|ref|YP_001579804.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189350454|ref|YP_001946082.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|160342221|gb|ABX15307.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189334476|dbj|BAG43546.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 250

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 94  PGLATVVCALALVGGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q++ L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|15601513|ref|NP_233144.1| arginine transporter permease subunit ArtQ [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|147672019|ref|YP_001215536.1| arginine transporter permease subunit ArtQ [Vibrio cholerae O395]
 gi|153818658|ref|ZP_01971325.1| membrane protein [Vibrio cholerae NCTC 8457]
 gi|229506085|ref|ZP_04395594.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae BX
           330286]
 gi|229510058|ref|ZP_04399538.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           B33]
 gi|229516381|ref|ZP_04405828.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           RC9]
 gi|229605616|ref|YP_002876320.1| arginine transporter permease subunit ArtQ [Vibrio cholerae
           MJ-1236]
 gi|254849919|ref|ZP_05239269.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255746481|ref|ZP_05420428.1| arginine ABC transporter permease protein ArtQ [Vibrio cholera CIRS
           101]
 gi|262152376|ref|ZP_06028509.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           INDRE 91/1]
 gi|262168600|ref|ZP_06036296.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           RC27]
 gi|9658180|gb|AAF96656.1| arginine ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|126510811|gb|EAZ73405.1| membrane protein [Vibrio cholerae NCTC 8457]
 gi|146314402|gb|ABQ18942.1| arginine ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227015181|gb|ACP11390.1| arginine ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229346262|gb|EEO11233.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           RC9]
 gi|229352503|gb|EEO17443.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           B33]
 gi|229356436|gb|EEO21354.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae BX
           330286]
 gi|229372102|gb|ACQ62524.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           MJ-1236]
 gi|254845624|gb|EET24038.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255736235|gb|EET91633.1| arginine ABC transporter permease protein ArtQ [Vibrio cholera CIRS
           101]
 gi|262023129|gb|EEY41834.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           RC27]
 gi|262030827|gb|EEY49458.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           INDRE 91/1]
          Length = 229

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%)

Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281
           +I GLP L+++   Y    Q+ F         FI G    +SP F+S  IALS   A++ 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L 
Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165

Query: 342 VAVGFADLV 350
             +G  DL+
Sbjct: 166 SLIGVTDLL 174


>gi|330432867|gb|AEC17926.1| glutamine ABC transporter permease protein [Gallibacterium anatis
           UMN179]
          Length = 219

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 32/208 (15%)

Query: 191 VFSFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +FS ++GI+ ++         +R+++ + E   +  PLL    FL FG+  L +     +
Sbjct: 29  LFSLIIGIICAVLLVYPVRVLSRIAKAYIE-ISRNTPLLIQIFFLYFGVAKLGI-----K 82

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      +    F+GGS                   ++AE  R GL+AV +GQ+E+A+++
Sbjct: 83  LDSITCAIISLAFLGGS-------------------YMAEAFRGGLLAVSKGQIESALSI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+ PQA    IP + +  L L+K +S+  A+   +L+ +   II    + 
Sbjct: 124 GLTPFQVFRYVIFPQAFAVAIPAIGANCLFLIKETSIVSAIAITELMFLAKEIIGMDYKT 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E + + M  YL + + +++F+  L  +
Sbjct: 184 NEALFLLMLFYLIVLLPLSIFVRYLEKR 211



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 35/57 (61%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           T +LA +G++ + IIG +     +   ++++ I + Y+E+ RN P L+ IFFLY  V
Sbjct: 20  TLYLAGAGILFSLIIGIICAVLLVYPVRVLSRIAKAYIEISRNTPLLIQIFFLYFGV 76


>gi|229593271|ref|YP_002875390.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229365137|emb|CAY53375.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 222

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 24/179 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L L   ++Q                       +++ I L  Y+  
Sbjct: 68  PFLVQLFFIFFGLPSLGLKITEWQ--------------------AAVLAMVINLGAYS-- 105

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
              EI+R+G+ A+PRGQ+EAA AL +T  +A R V+L  A+  + P L+SQ + ++  S+
Sbjct: 106 --TEIIRAGIQAIPRGQLEAAAALAMTRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSA 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +   +L      I ++  +A E   +   +YL +++MI   +N +  +  ++  +
Sbjct: 164 VCSQIATEELSFAANFIQSRNFRAFETYALTTLVYLCMALMIRQLLNWIGRRFVMRNSR 222


>gi|150019161|ref|YP_001311415.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149905626|gb|ABR36459.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 235

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 34/218 (15%)

Query: 191 VFSFVLGIVLSLFAT--RLSR---------HFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           VF F L I+L LF    R+S+          F E   +  PLL    ++ + +P LV I 
Sbjct: 32  VFGFFLAIILGLFIAIGRISKIKILRGFLLVFLEFI-RGTPLLVQLVYMYYVVPLLVSII 90

Query: 240 LK-----YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++     YQ      V G              + L I   CY    I+E++RS ++++  
Sbjct: 91  VQIWNPGYQFKISSLVAGT-------------IGLGINYGCY----ISEVIRSSILSIDG 133

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA+ALGLT+ +    +++PQA+R++IP   +  + +LK++SL   V  ++L+    
Sbjct: 134 GQTEAALALGLTNNQTMFRIIIPQALRNVIPVFGNYLVMMLKDTSLLAYVSVSELLLRTQ 193

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  +Q+   IE   I    YL LS+ +A  +  +  K+
Sbjct: 194 SYASQSFLTIESYTILAGFYLILSLPLAQLVKLVEKKM 231


>gi|145631225|ref|ZP_01786998.1| arginine ABC transporter permease protein [Haemophilus influenzae
           R3021]
 gi|144983152|gb|EDJ90647.1| arginine ABC transporter permease protein [Haemophilus influenzae
           R3021]
          Length = 221

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F    +ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVLALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|150376015|ref|YP_001312611.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150030562|gb|ABR62678.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 217

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 68/126 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS YTAAF AEIVR G+ +VP     AA +LG+T  +  R ++ P A R  +P
Sbjct: 87  FTTSGVVLSLYTAAFCAEIVRGGISSVPVTTRRAARSLGMTWWQDMRYIVAPLATRVSLP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 L ++K+S+L + +G  +L+     ++ +  + + I+LI   IY  LS  +A F 
Sbjct: 147 SWIGLTLGVMKDSALVLWLGLVELLRASQILVTRLQEPLFILLICGAIYFLLSFPVARFG 206

Query: 386 NRLNAK 391
             L  +
Sbjct: 207 GYLEKR 212


>gi|158426029|ref|YP_001527321.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332918|dbj|BAF90403.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 224

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 71/113 (62%), Gaps = 2/113 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA-TRLVLLPQAMRSIIPPLTS 329
           +A+     A+  EIVR+G+  + +GQ+EA +ALGL   +  T +V+ P A+++I P LTS
Sbjct: 95  LAMVVNIGAYATEIVRAGIETIHKGQIEAGLALGLKPVQVFTYIVIFP-ALKAIYPALTS 153

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           Q++ L+  SS+  A+   +L ++   +  QT ++ EI ++   +YL++S+M A
Sbjct: 154 QFILLMLTSSVVSAISAEELTAIANNLQAQTFRSFEIYIVVTAMYLAMSLMFA 206


>gi|288561032|ref|YP_003424518.1| amino acid ABC transporter permease protein [Methanobrevibacter
           ruminantium M1]
 gi|288543742|gb|ADC47626.1| amino acid ABC transporter permease protein [Methanobrevibacter
           ruminantium M1]
          Length = 217

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 80/139 (57%), Gaps = 3/139 (2%)

Query: 256 FIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           +I G T+S ++  +++ IA +   AA+ AEI R G+ ++P GQ EAA  LG T  +   +
Sbjct: 75  YIFGMTLSRDYRMIAVIIAFTINYAAYFAEIFRGGIESIPNGQYEAAQVLGYTRVQTFFI 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ ++ ++P +T++ + L+K++SL+  +   ++ +V   I         +++   F 
Sbjct: 135 IILPQVVKIVLPSITNEVITLVKDTSLSFVLAIPEMFTVAKQIAAAEASISALLIAGGFY 194

Query: 374 YLSLSIMIALFMNRLNAKI 392
           Y+  + ++A+ M R   ++
Sbjct: 195 YV-FNALVAIIMERFEKRL 212


>gi|261212507|ref|ZP_05926792.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC341]
 gi|260838438|gb|EEX65094.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC341]
          Length = 229

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  IALS   A++ A+ +R  L AV RGQ EAA ALG+    A   ++LPQA+R
Sbjct: 87  ISP-FISGVIALSLIFASYAAQTLRGALKAVGRGQREAASALGIPPAHAFFRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P L +Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174


>gi|227514517|ref|ZP_03944566.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087074|gb|EEI22386.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 224

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 50/76 (65%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R GL ++ +GQ E A  L L++ +  R +++PQ ++ +IP + ++ +NL+K+
Sbjct: 107 AAYFAEIFRGGLQSISQGQYEGARVLRLSYWQTVRKIVIPQVVKIVIPSIGNEVINLIKD 166

Query: 338 SSLAVAVGFADLVSVG 353
           SSL   +G  DL+  G
Sbjct: 167 SSLVYVIGLGDLLRAG 182


>gi|218462542|ref|ZP_03502633.1| ABC transporter, membrane spanning protein [Rhizobium etli Kim 5]
          Length = 174

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 60/104 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A G+TH    R + LP+A+R  +P +  + +  LK 
Sbjct: 56  AAYEAEVLRGALLAVPKGELEAGRAFGMTHWTLLRRIWLPRAIRIALPTIAGEVVLQLKA 115

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           + LA  V   DL +V   I   T    E +++    Y+ L+I+I
Sbjct: 116 TPLAFTVTVMDLYAVAYKIRQDTLLVYEPLIVVTIFYVCLTIVI 159


>gi|28871279|ref|NP_793898.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28854529|gb|AAO57593.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 237

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I+L     A
Sbjct: 60  IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVISLGFIYGA 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 116 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 176 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 211


>gi|57242095|ref|ZP_00370035.1| amino acid ABC transporter, permease protein [Campylobacter
           upsaliensis RM3195]
 gi|315638190|ref|ZP_07893372.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter upsaliensis JV21]
 gi|57017287|gb|EAL54068.1| amino acid ABC transporter, permease protein [Campylobacter
           upsaliensis RM3195]
 gi|315481726|gb|EFU72348.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter upsaliensis JV21]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 7/124 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S YT++ +AEI+R GL ++P+GQ EAA + G         ++LPQ  R ++P + SQ
Sbjct: 91  IGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRRVVPSMLSQ 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-------IWMFIYLSLSIMIAL 383
            +  +K+++    +G A+L     TI+       EI+        I+  I  SLS+++  
Sbjct: 151 IITTIKDTAYLAGLGIAELTYKSKTILANLKSFEEILAIIGFVAGIYFVICFSLSMLVRY 210

Query: 384 FMNR 387
           +  +
Sbjct: 211 YAKK 214


>gi|307250883|ref|ZP_07532811.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306857133|gb|EFM89261.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 238

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 19/173 (10%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 96  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +  R ++ PQA+R  +PPL++ ++ L K++SLA  V   ++  V   + N +
Sbjct: 148 MQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMS 200


>gi|257876242|ref|ZP_05655895.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257810408|gb|EEV39228.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 529

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV  GQ EAA A+G+TH +    V+LPQ MR+I+P   ++ +
Sbjct: 394 VSINTGAYMSEIVRGGIFAVDDGQFEAAQAIGMTHWQTMIKVVLPQVMRNILPATGNEII 453

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             +K++++   +  ADL   G +      Q  +   I   IYL L+I
Sbjct: 454 INIKDTAVLSVISVADLFFQGTSAAGTNFQYFQTFAIIGVIYLVLTI 500


>gi|170770015|ref|ZP_02904468.1| arginine ABC transporter, permease protein ArtQ [Escherichia
           albertii TW07627]
 gi|170121081|gb|EDS90012.1| arginine ABC transporter, permease protein ArtQ [Escherichia
           albertii TW07627]
          Length = 238

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q N I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMN-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|326795939|ref|YP_004313759.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326546703|gb|ADZ91923.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 516

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 76/133 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  ++L    AA++AEI R+GL+++ +GQ EA  AL +      RL+++PQA+R  +P
Sbjct: 94  FIAGLVSLVITEAAYMAEIHRTGLLSIGKGQREAGHALSIGFLGVQRLIVIPQALRISMP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++Y+ ++K SSL  A+  ++++  G  + +Q    +E +L     Y+ +  +    +
Sbjct: 154 ALINEYVTVIKLSSLVSAISLSEILQTGQRLYSQNFLVMETLLAVAVYYVGIVTIFGSVL 213

Query: 386 NRLNAKIALKEKK 398
             +  ++ +  +K
Sbjct: 214 QWIERRMDVPSRK 226


>gi|325567258|ref|ZP_08143925.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158691|gb|EGC70837.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 529

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 62/107 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV  GQ EAA A+G+TH +    V+LPQ MR+I+P   ++ +
Sbjct: 394 VSINTGAYMSEIVRGGIFAVDDGQFEAAQAIGMTHWQTMIKVVLPQVMRNILPATGNEII 453

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             +K++++   +  ADL   G +      Q  +   I   IYL L+I
Sbjct: 454 INIKDTAVLSVISVADLFFQGTSAAGTNFQYFQTFAIIGVIYLVLTI 500


>gi|315635241|ref|ZP_07890518.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315475987|gb|EFU66742.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 85/154 (55%), Gaps = 5/154 (3%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +L  + P+L Q  F + G S +  +   F    I L+    +++AE +R GL AV +GQ+
Sbjct: 58  ELSRNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAIRGGLEAVSKGQI 117

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+A+++GLT  +A R V+ PQA     P + +  L L+K +S+  AV  A+L+ V   +I
Sbjct: 118 ESALSIGLTPFQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVI 177

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  E + + +  YL + + ++LF++ L  +
Sbjct: 178 GLDYKTNEALFLLVVFYLIILLPMSLFISYLERR 211



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  LAF G++ + +IG +         K + W+ + Y+E+ RN P L+ +FFLY
Sbjct: 20  TLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFLY 73


>gi|311894709|dbj|BAJ27117.1| putative amino acid ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 293

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 10/129 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A   LY+  F   G+PT++LI L   + F  P +     + G+  SP  +     +  Y
Sbjct: 119 RATAALYVDVFR--GVPTMLLIFL---IGFGVPAMQ----LQGTPKSPVVLGAIALVVSY 169

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TA ++AE+ R+GL +V   Q  AA ALGL+ ++  R V+LPQA+R+++P L + ++ L K
Sbjct: 170 TA-YVAEVFRAGLTSVHPAQHNAARALGLSRQQTMRSVVLPQAVRNVLPALLNDFIALQK 228

Query: 337 NSSLAVAVG 345
           +++L   +G
Sbjct: 229 DTALVAVLG 237


>gi|302339788|ref|YP_003804994.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636973|gb|ADK82400.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 357

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 3/125 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++C+ +A++AE++R GL ++P+GQ EA+ +LG        L++LPQ ++  +  +   
Sbjct: 223 VGMTCFQSAYLAEVIRGGLQSIPKGQYEASDSLGFGFSLQQYLIILPQVLKVTVANIGGI 282

Query: 331 YLNLLKNSSLAVAVGFADL---VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ LK+++L + +G  DL   VS   +  N  G   E  L    IY  +   I+   NR
Sbjct: 283 SISFLKDTTLVLIIGMFDLLGMVSPLASDSNWLGMEPEGYLFAGLIYWLICFTISRITNR 342

Query: 388 LNAKI 392
           +  K+
Sbjct: 343 IEEKV 347


>gi|260459413|ref|ZP_05807668.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259034967|gb|EEW36223.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 239

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 14/176 (7%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-P 264
           RL+ + +    + LP L       FG+P L    L++ + + +P          +T+   
Sbjct: 58  RLAANIYTTVFRGLPELVTLFLFFFGVPIL----LQHLIRYFRPE---------ATIDVN 104

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F++  I LS   +++ +E+  S   A+P+GQ E   A+GL++ +  R V+LPQ +R   
Sbjct: 105 SFVAGMIVLSLIFSSYASEVFLSAFRAIPKGQYEGGYAIGLSYGQTMRKVILPQLLRIAF 164

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           P L + +L+LLK++SL   VG A+ +   G     T  +     +   ++L L+I+
Sbjct: 165 PGLENCWLSLLKDTSLVSVVGLAETLRNAGVAARVTKHSFLFYGVAALVFLGLAIV 220


>gi|221218202|ref|YP_002524229.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides KD131]
 gi|221163229|gb|ACM04195.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides KD131]
          Length = 243

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 53/95 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +A+S +  A  A+I+R+GL +V RGQ E A A G    K   LV LPQAM  I+P
Sbjct: 84  FWSCCLAISVWGGANGAQILRAGLASVGRGQRETAAAFGFGPVKTLLLVTLPQAMPVIVP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P       L++ +SL   VG  +L+  G  +I QT
Sbjct: 144 PYVGLLTALVQATSLGAVVGAQELLRTGQVLIEQT 178


>gi|170700297|ref|ZP_02891310.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170134784|gb|EDT03099.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 244

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 73/125 (58%), Gaps = 1/125 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +GG+ ++P F+   I +S +  AF AE +R+GL AVPR  +EAA +LG + R+    V L
Sbjct: 103 LGGNPLTP-FIWSVIVISLHKGAFHAEALRAGLEAVPRATLEAAQSLGYSRRQRLWHVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q    +E++++ +  + +
Sbjct: 162 PLAVRFALPALVNNLVDLVKMTTVASAIAVGDVTYASIMIWTQRDNVLELMILILLFFGA 221

Query: 377 LSIMI 381
           L+  +
Sbjct: 222 LTFTV 226


>gi|77404678|ref|YP_345252.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|77390328|gb|ABA81511.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 243

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 53/95 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +A+S +  A  A+I+R+GL +V RGQ E A A G    K   LV LPQAM  I+P
Sbjct: 84  FWSCCLAISVWGGANGAQILRAGLASVGRGQRETAAAFGFGPVKTLLLVTLPQAMPVIVP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P       L++ +SL   VG  +L+  G  +I QT
Sbjct: 144 PYVGLLTALVQATSLGAVVGAQELLRTGQVLIEQT 178


>gi|308178341|ref|YP_003917747.1| L-cystine ABC transporter inner membrane subunit TcyB [Arthrobacter
           arilaitensis Re117]
 gi|307745804|emb|CBT76776.1| L-cystine ABC transporter, inner membrane subunit TcyB
           [Arthrobacter arilaitensis Re117]
          Length = 221

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 74/134 (55%), Gaps = 1/134 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+ P + S  IA S     + AEI+R+ +++VP+GQ EA   LG++  +    ++LPQ
Sbjct: 83  GLTIDP-WPSAIIAFSLNIGGYAAEIIRAAILSVPQGQWEAGYTLGMSRTRTLYRLILPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +PPL++ +++L+K++SLA  +   ++      I   T + + +      IY  + 
Sbjct: 142 ATRVAVPPLSNSFISLVKDTSLASTILVTEMFRKAQEITASTYEFLLLYCEAAAIYWVIC 201

Query: 379 IMIALFMNRLNAKI 392
           ++++   N +  ++
Sbjct: 202 LVLSALQNSVEGRL 215


>gi|303250830|ref|ZP_07337024.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307253267|ref|ZP_07535141.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650343|gb|EFL80505.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306859254|gb|EFM91293.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 238

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 19/173 (10%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+
Sbjct: 96  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +  R ++ PQA+R  +PPL++ ++ L K++SLA  V   ++  V   + N +
Sbjct: 148 MQTFRRIIAPQAIRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMS 200


>gi|184154979|ref|YP_001843319.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|260663374|ref|ZP_05864265.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|183226323|dbj|BAG26839.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|260552226|gb|EEX25278.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|299782992|gb|ADJ40990.1| Glutamine ABC transporter permease component [Lactobacillus
           fermentum CECT 5716]
          Length = 215

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 50/76 (65%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R GL ++ +GQ E A  L L++ +  R +++PQ ++ +IP + ++ +NL+K+
Sbjct: 98  AAYFAEIFRGGLQSISQGQYEGARVLRLSYWQTVRKIVIPQVVKIVIPSIGNEVINLIKD 157

Query: 338 SSLAVAVGFADLVSVG 353
           SSL   +G  DL+  G
Sbjct: 158 SSLVYVIGLGDLLRAG 173


>gi|171779323|ref|ZP_02920287.1| hypothetical protein STRINF_01168 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281940|gb|EDT47371.1| hypothetical protein STRINF_01168 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 213

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +    ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIAAIPKGQYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|167911014|ref|ZP_02498105.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 112]
          Length = 193

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 40  PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 99

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 100 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 135


>gi|110636300|ref|YP_676508.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110287284|gb|ABG65343.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chelativorans sp. BNC1]
          Length = 234

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 70/119 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AEI R+G  ++P  Q EAA +L L+  +    V+LPQA+R+I  PL+ Q
Sbjct: 94  VALVINCGAYSAEIFRAGFQSIPPAQKEAAESLALSKIQTFVYVILPQALRNIWVPLSGQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ ++  SS+   +   +L +    I +QT ++ E+ ++   +YL+LSI++   + R+ 
Sbjct: 154 FILIMLASSIVSQISAEELTAAASQIQSQTFRSFEVYVVLAALYLALSIVLKTVLVRMG 212


>gi|327189353|gb|EGE56521.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 268

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238
            L +     + + +  +G+ +  F   L +   EK  +    +Y + F   GLP L+ L 
Sbjct: 50  ALGLQVTVSVAIVTLPIGLAIG-FLVALGQQSEEKPLRLAAGIYTTIFR--GLPELLTLF 106

Query: 239 ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            + Y +    + +L    ++G       F++  IALS   +A+ +E++ S   A+P+GQ 
Sbjct: 107 IIYYGMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQY 166

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  +LGL   +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD++      +
Sbjct: 167 EAGDSLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAV 226

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             T +      I   +YL L+I+ +  +  ++
Sbjct: 227 RVTKEPFFFYGIACCLYLVLAILSSFLLVHID 258


>gi|325062399|gb|ADY66089.1| polar amino acid uptake family ABC transporter, permease protein
           [Agrobacterium sp. H13-3]
          Length = 270

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKA---------LPLLYISTFLIFGLPTLVLIALKYQ 243
            F+L I+LS+ +  ++       G A         LP  ++  FL      ++L A+ Y 
Sbjct: 61  GFILNILLSIASMAVATTLGTVMGLATLAKSPFIRLPAFFVMNFLRNSPWLVLLFAMLYI 120

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L F+  +   F F+      P F+   I L+  TAA  +E++R  + ++  GQ EA+ +L
Sbjct: 121 LPFEMKI---FGFV---VPFPPFVKAVIGLALPTAANFSEVIRGAVQSIHSGQWEASRSL 174

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R V+LPQA+R +IP   + Y  L+  ++LA   G  D++++  T +    + 
Sbjct: 175 GYTQLQIYRYVILPQALRRMIPGWMNLYALLMIATALATVTGIQDVLTILNTSLAMESER 234

Query: 364 --IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   L  +F++ +    IA+F  RL   +
Sbjct: 235 ALVYFYLTILFLFFAYCYPIAIFARRLEHAV 265


>gi|302551653|ref|ZP_07303995.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469271|gb|EFL32364.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
          Length = 238

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 63/122 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +EIVR  L AV   Q E  IAL  T  +  RL+LLPQA+  +IPP ++ 
Sbjct: 88  LALGLTYGAYGSEIVRGALSAVDPAQKEGGIALSFTPWQRMRLILLPQAVPEMIPPFSNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL   G  +     ++ EI    + IY  ++ ++   M  L  
Sbjct: 148 LIELLKGTALVSIMGMGDLAFSGNLVRLALQESAEIYTYILLIYFVIAFLLTRVMRGLEK 207

Query: 391 KI 392
           K+
Sbjct: 208 KL 209


>gi|255261957|ref|ZP_05341299.1| histidine transport system permease protein HisQ [Thalassiobium sp.
           R2A62]
 gi|255104292|gb|EET46966.1| histidine transport system permease protein HisQ [Thalassiobium sp.
           R2A62]
          Length = 237

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 20/171 (11%)

Query: 191 VFSFVLGIV--LSLFATRLSR-----HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           ++S  LG+V  L L A +LSR      F E            T  I G+P  +++ + + 
Sbjct: 31  LWSMTLGLVMGLGLAALKLSRFVLLRWFAEGY----------TLFIRGMPEFLILLIVF- 79

Query: 244 LHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D+ +    N  G    +  P+F++    LS   AA+  EI R   +AVP GQ+EAA 
Sbjct: 80  FGSDQLINALLNAFGSDARAEVPKFVAAVAGLSAIFAAYACEIFRGAYLAVPAGQIEAAQ 139

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           A+GL+  K  R V  PQ  R  IP L + ++ +LK++SLA  +   +L+ +
Sbjct: 140 AVGLSVGKVFRRVRFPQMWRYAIPGLGNLWMVVLKDTSLAAVIALDELLRI 190


>gi|241205009|ref|YP_002976105.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858899|gb|ACS56566.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 268

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 18/161 (11%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL+   +    + LP L     + +G+  L+   L + + +D P +    F+ G      
Sbjct: 86  RLAAGIYTTIFRGLPELLTLFIIYYGMQMLIQSLLTF-VGYDGPPIEINAFLAG------ 138

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                IALS   +A+ +E++ S   A+P+GQ EA  ALGL   +  RL++LPQ +R  +P
Sbjct: 139 ----VIALSVVFSAYCSEVLLSAFRAIPKGQYEAGDALGLHRGRTLRLIVLPQLVRIALP 194

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            LT+ ++ LLK++S    +  AD       I+ QT  A+ +
Sbjct: 195 GLTNLWMVLLKDTSYVSIISLAD-------ILRQTSVAVRV 228


>gi|301630317|ref|XP_002944268.1| PREDICTED: hypothetical protein LOC100492530 [Xenopus (Silurana)
           tropicalis]
          Length = 511

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 55/74 (74%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +EI+R+G+ ++ RGQ+ A  ALG+T+ +  RLV+LPQA+R+++P L +Q + L ++
Sbjct: 159 AAYFSEIMRAGIQSIARGQVFAGQALGMTYGQNMRLVILPQALRNMLPVLLTQTIILFQD 218

Query: 338 SSLAVAVGFADLVS 351
           +SL  A+G  D++ 
Sbjct: 219 TSLVYAIGAYDMLK 232


>gi|282862285|ref|ZP_06271347.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282562624|gb|EFB68164.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 291

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 27/197 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S VLG+VL++   RLS H         P+ +++T  I    ++ L+   Y +      
Sbjct: 79  VGSLVLGVVLAV--GRLSDHK--------PVRWLATGFIELFRSIPLLITIYAIWV---- 124

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                   G        +L   LS Y     AE++R+G+ +VP+GQ EAA ALG++  + 
Sbjct: 125 --------GFLTDYSMWALAAGLSVYNGCVQAEVLRAGVNSVPKGQSEAAYALGMSKTQV 176

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-----VGGTIINQTGQAIE 365
              VL+PQA+R+++P + SQ +  LK++SL   + + +L++        T++N     + 
Sbjct: 177 MVGVLIPQAVRAMLPTIISQLVVTLKDTSLGYIILYPELLNSARLIASNTLVNGQYPYVS 236

Query: 366 IILIWMFIYLSLSIMIA 382
            I++   IY+++ ++++
Sbjct: 237 TIVVIGVIYVAMCLLLS 253



 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 31/46 (67%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154
           ++G ++  GRLS +K V W+   ++E+FR+IP L+ I+ ++   L+
Sbjct: 83  VLGVVLAVGRLSDHKPVRWLATGFIELFRSIPLLITIYAIWVGFLT 128


>gi|222109051|ref|YP_002551317.1| ABC transporter membrane spanning protein (opine) [Agrobacterium
           radiobacter K84]
 gi|221727973|gb|ACM31023.1| ABC transporter membrane spanning protein (opine) [Agrobacterium
           radiobacter K84]
          Length = 241

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 110/210 (52%), Gaps = 10/210 (4%)

Query: 177 SFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP L   + T   +   S ++G V+S+    L R    +   ++   Y+  +LI   P 
Sbjct: 9   SFPKLIAAVPTTLALAFISLLIGFVVSV-PVALMRLSKNRIVSSVAYGYV--YLIRSTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LV + L Y  +      G    IG   S   P F ++ +AL+  TAA+ +EI+R G+ AV
Sbjct: 66  LVQMFLIY--YGSAQFRGFLTEIGLWSSFREPWFCAI-LALALNTAAYTSEIIRGGIQAV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ+EAA A+G++     R ++ P A+R  +P   ++ + ++K++SLA  +   ++  +
Sbjct: 123 PLGQIEAARAVGMSTVLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGL 182

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
              II+ T   +E+ ++   IYL ++ +++
Sbjct: 183 AKQIISATYSPVEVFIVAGAIYLFITFIVS 212


>gi|197302609|ref|ZP_03167664.1| hypothetical protein RUMLAC_01338 [Ruminococcus lactaris ATCC
           29176]
 gi|197298507|gb|EDY33052.1| hypothetical protein RUMLAC_01338 [Ruminococcus lactaris ATCC
           29176]
          Length = 228

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 95/180 (52%), Gaps = 12/180 (6%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           PL YI+  +++   G P ++ + + Y  +F   VL   N + G   S  F++  +A    
Sbjct: 50  PLKYITNIIVWVVRGTPLMIQMLIIY--YFPGLVLN--NVVWGGGESGRFVAASVAFIFN 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            A + + I R G+ +VP+GQ EA + LG+T  +    + L Q ++ I+PP++++ + L+K
Sbjct: 106 YACYFSVIYRGGIQSVPQGQTEAGLVLGMTKSQIFFKITLMQMIKRIVPPMSNEIITLVK 165

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI----YLSLSIMIALFMNRLNAKI 392
           ++SLA  +   +++  G + +  + Q I   +  MF     YL  + ++ + + RL  K+
Sbjct: 166 DTSLARIIALQEIIWAGQSFLKGS-QGISGAIWPMFFAAVYYLVFNGILTVLLGRLEKKL 224


>gi|167919030|ref|ZP_02506121.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei BCC215]
          Length = 242

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204


>gi|330427241|gb|AEC18575.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Pusillimonas sp. T7-7]
          Length = 279

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 65/110 (59%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EIVR  L++VP+G  EA  A+GL   K    ++ P A+R +IP + +Q +  LK
Sbjct: 161 SGAYISEIVRGALLSVPKGLKEAGQAMGLPFYKILAYIIGPVALRRMIPAMGNQCIISLK 220

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +SSL + +G A+L   G  II    +++EI      +YL L+  IAL + 
Sbjct: 221 DSSLFIVIGVAELTRQGQEIIASNFRSVEIWGAVAVLYLILTGFIALTLK 270


>gi|260461090|ref|ZP_05809339.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033124|gb|EEW34386.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 215

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 65/119 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ + +A++AEI RSG+ A+P GQ +A  +LGL + +  RL++LPQA      P    
Sbjct: 91  IGLTFFASAYLAEIWRSGVDALPLGQWDAGASLGLHYLQELRLIILPQAFSITRAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + L+K+++L   +GF +LV     I N T +  ++  +   I+  +   +  +  RL 
Sbjct: 151 LVQLIKSTALTSIIGFEELVRTSNAINNATFEPFKVYGLVALIFFVMCFPLTQYARRLE 209


>gi|210630039|ref|ZP_03296224.1| hypothetical protein COLSTE_00108 [Collinsella stercoris DSM 13279]
 gi|210160716|gb|EEA91687.1| hypothetical protein COLSTE_00108 [Collinsella stercoris DSM 13279]
          Length = 229

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 52/80 (65%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSGL ++PRGQ EAA  LG +  +    + LPQ ++ I+P + ++ + L+K+
Sbjct: 111 AAYFAEIYRSGLQSIPRGQYEAAEVLGYSKPQTFCYIALPQLIKRIMPAIGNEVITLVKD 170

Query: 338 SSLAVAVGFADLVSVGGTII 357
           +SLA A+G  ++ S    ++
Sbjct: 171 TSLAFAIGVGEMFSTAKALV 190


>gi|190892106|ref|YP_001978648.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190697385|gb|ACE91470.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 268

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 5/212 (2%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238
            L +     + + +  +G+ +  F   L +   EK  +    +Y + F   GLP L+ L 
Sbjct: 50  ALGLQVTVSVAIVTLPIGLAIG-FLVALGQQSEEKPLRLASGIYTTIFR--GLPELLTLF 106

Query: 239 ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            + Y +    + +L    ++G       F++  IALS   +A+ +E++ S   A+P+GQ 
Sbjct: 107 IIYYGMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQY 166

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  +LGL   +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD++      +
Sbjct: 167 EAGDSLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAV 226

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             T +      I   +YL L+I+ +  +  ++
Sbjct: 227 RVTKEPFFFYGIACCLYLVLAILSSFLLVHID 258


>gi|241206675|ref|YP_002977771.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860565|gb|ACS58232.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 215

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/121 (35%), Positives = 68/121 (56%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ Y +A++AEI RSG+ AVPRGQ +AA +LGL      RL++LPQA R    P     +
Sbjct: 93  LTFYASAYLAEIWRSGVEAVPRGQWDAAASLGLHRLLELRLIILPQAFRITRAPTVGFLV 152

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+K+++LA  +GF +L+     I N T +  ++  +   I+ +L   +  +   L  K 
Sbjct: 153 QLIKSTALASILGFDELLKTANAINNATFEPFKVYGLVAVIFFALCYPLTQYARFLEKKA 212

Query: 393 A 393
           A
Sbjct: 213 A 213


>gi|145637071|ref|ZP_01792734.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittHH]
 gi|145269725|gb|EDK09665.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittHH]
          Length = 221

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F    +ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVLALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|86151590|ref|ZP_01069804.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|121612476|ref|YP_001000174.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|167005132|ref|ZP_02270890.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85841219|gb|EAQ58467.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|87250268|gb|EAQ73226.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 233

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F      LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLDLICLSVEETLRPSFACAIAGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +
Sbjct: 10  APAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQL 69

Query: 146 FFLYKSV 152
           FFLY ++
Sbjct: 70  FFLYYAL 76


>gi|326693557|ref|ZP_08230562.1| amino acid ABC transporter permease [Leuconostoc argentinum KCTC
           3773]
          Length = 232

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 69/116 (59%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  T A+ +E VR+ + +VPR Q+EAA +LG+   +    V+LPQA R  IPPL++  + 
Sbjct: 109 SLNTGAYASESVRAAISSVPRVQIEAAESLGMNRWQVFADVILPQAARISIPPLSNALIG 168

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           LLK++SLA  +   ++  +   I  +  Q + + ++  F+Y  L+ ++++  ++L 
Sbjct: 169 LLKDTSLASVITIVEMFYLSQQIAAENYQILTMYILAAFVYAVLTTILSIAQHQLE 224


>gi|315124013|ref|YP_004066017.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315017735|gb|ADT65828.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 233

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F      LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLDLICLSVEETLRPSFACAIAGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FFLY ++
Sbjct: 20  TIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYAL 76


>gi|300722506|ref|YP_003711796.1| arginine ABC transporter membrane protein [Xenorhabdus nematophila
           ATCC 19061]
 gi|297629013|emb|CBJ89598.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus
           nematophila ATCC 19061]
          Length = 238

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 6/185 (3%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF---IGGSTVSPEFMSLYIAL 273
           + LP + +  F+ FG  +  LI L      +  ++ QF     I    VSP F+   IAL
Sbjct: 55  RGLPEILVVLFIYFG-SSQFLITLSEGFEVNL-IVWQFKVQMDINSFDVSP-FLCGVIAL 111

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S   +A+ ++ +R  L AVP GQ EA  ALGL+  +    +++PQ  R  +P L +Q+L 
Sbjct: 112 SLLYSAYASQTLRGALKAVPIGQWEAGQALGLSQSRIFFRLVMPQMWRHALPGLGNQWLV 171

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK+++L   +   DL+    +I  +T +     +    IYL+++++    + RL  +  
Sbjct: 172 LLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVTVAAIYLAITLISQFILRRLEMRAT 231

Query: 394 LKEKK 398
             E+ 
Sbjct: 232 RFERS 236


>gi|222082285|ref|YP_002541650.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726964|gb|ACM30053.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 224

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 18/187 (9%)

Query: 195 VLGIVLSLF---ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           VL I+LS+       + R    +  + + + YI   ++   P LV++   Y ++F  P +
Sbjct: 29  VLAIILSVIIGCGLAIMRRSQSRFARFVAVAYIE--VMRNTPLLVIL---YIVYFALPAM 83

Query: 252 G-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G +F+          F +  I L+  +A ++AEI+R+GL+A+  GQ EAA A G    + 
Sbjct: 84  GLRFS---------SFAAASIGLTLNSAGYMAEIIRAGLVAIAHGQFEAARAQGFNPVQT 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++L Q  R I  PL +Q + ++  SSLA AV   D+ S   T+ + + +  E  L+ 
Sbjct: 135 YRHIILQQVFRVIYAPLGNQVIAVILASSLASAVAVEDVASWMQTVGSTSFRFFETFLVA 194

Query: 371 MFIYLSL 377
             +YL L
Sbjct: 195 AAVYLVL 201


>gi|86360896|ref|YP_472783.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284998|gb|ABC94056.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 11/169 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +I G P LVL+   Y  +    V        G  + P F +  +AL+ + ++ + EIV
Sbjct: 60  TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAVFCSSHVGEIV 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G
Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFAQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+L+     II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217


>gi|134290994|ref|YP_001114763.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134134183|gb|ABO58508.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 240

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261
           +LSRH   ++ + L  LY + F   G+P L++I   Y  +F    L    GQ+    G  
Sbjct: 47  KLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGADGFI 98

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G+      R +L+PQ +R
Sbjct: 99  GVPPFVIGALAVGMISGAYQAEVYRAAVLAVAKGELEAARSIGMPRGMVLRRILVPQVLR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +   LK+S+L    G A+L+       N T Q     +    +YL ++ + 
Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAANSTHQYFLFFVAGGALYLLMTALS 218

Query: 382 ALFMNRLNAKIALKEKK 398
               NR  A +    ++
Sbjct: 219 NRVFNRAEALVGRSFRR 235


>gi|229526721|ref|ZP_04416125.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae bv.
           albensis VL426]
 gi|229336879|gb|EEO01897.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae bv.
           albensis VL426]
          Length = 229

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%)

Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281
           +I GLP L+++   Y    Q+ F         FI G    +SP F+S  IALS   A++ 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L 
Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165

Query: 342 VAVGFADLV 350
             +G  DL+
Sbjct: 166 SLIGVTDLL 174


>gi|225868657|ref|YP_002744605.1| amino acid ABC transporter permease protein [Streptococcus equi
           subsp. zooepidemicus]
 gi|225870390|ref|YP_002746337.1| amino acid ABC transporter permease protein [Streptococcus equi
           subsp. equi 4047]
 gi|225699794|emb|CAW93605.1| putative amino acid ABC transporter permease protein [Streptococcus
           equi subsp. equi 4047]
 gi|225701933|emb|CAW99456.1| putative amino acid ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 213

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+  +P GQ EAA  L L+  +  R V+LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGIETIPNGQYEAAKVLKLSPVQTVRYVILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|163857187|ref|YP_001631485.1| putative amino-acid ABC transporter, permease protein [Bordetella
           petrii DSM 12804]
 gi|163260915|emb|CAP43217.1| putative amino-acid ABC transporter, permease protein [Bordetella
           petrii]
          Length = 226

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 14/201 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF  G+VL+ F   L R F      AL   Y+  +LI G P LV +   + + +  P 
Sbjct: 28  LLSFAGGLVLA-FIVALIRLFGPAPLVALVRFYV--WLIRGTPLLVQL---FVIFYGLPS 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G         V     +  I  +    A+ +E++R  + ++P+GQ EAA +L +T  +A
Sbjct: 82  VG--------IVLDPLPAALIGFTLNVGAYNSEVIRGAIESIPKGQWEAAYSLSMTRGQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R  +LPQA R  +PPL + +++L+K++SLA  +   ++      I   T + + +    
Sbjct: 134 MRRTVLPQAARVAVPPLANSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEA 193

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
             IYL  S  ++    RL  +
Sbjct: 194 ALIYLVFSSALSAAQTRLERR 214


>gi|229528369|ref|ZP_04417760.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           12129(1)]
 gi|254285779|ref|ZP_04960742.1| arginine ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|150424276|gb|EDN16214.1| arginine ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|229334731|gb|EEO00217.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           12129(1)]
 gi|327485764|gb|AEA80170.1| Arginine ABC transporter, permease protein ArtQ [Vibrio cholerae
           LMA3894-4]
          Length = 229

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%)

Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281
           +I GLP L+++   Y    Q+ F         FI G    +SP F+S  IALS   A++ 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L 
Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165

Query: 342 VAVGFADLV 350
             +G  DL+
Sbjct: 166 SLIGVTDLL 174


>gi|89214060|gb|ABD64372.1| amino acid ABC transporter permease protein 2 [Pseudomonas
           chlororaphis]
          Length = 215

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP +++  IAL+ +T+A++AEI R  + ++P GQ EA+ +L L   +  R V+LPQ
Sbjct: 79  GVDISP-WLAAAIALTLFTSAYLAEIWRGCVDSIPNGQWEASSSLALNPYEQLRHVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +G  +L   GG + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGLTELTKTGGMLANAT 179


>gi|260463585|ref|ZP_05811784.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium opportunistum WSM2075]
 gi|259030676|gb|EEW31953.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium opportunistum WSM2075]
          Length = 242

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 14/204 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I +   +L +++ + A  L+R +     + L  +Y+  F   G   LV      QL + 
Sbjct: 42  EIAILGSLLAVIMGVLAA-LARLYGPAPLRWLATVYVEIFR--GTSALV------QLFWL 92

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             VL QF    G T+   F+   +AL     A+ +E+VR  +++V RGQ E   AL ++ 
Sbjct: 93  FFVLPQF----GVTLD-AFLVAVVALGLNVGAYGSEVVRGAILSVGRGQWEGCTALNMSR 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+LPQA  ++IPP  + ++ LLK++SL   +  +DL      +   T + I I 
Sbjct: 148 AQMLRRVILPQAFVAMIPPWGNLFIELLKSTSLVSLITLSDLAFKAQQMNQNTFKTIPIF 207

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
            + + +YL +S+++ + M  L  +
Sbjct: 208 TLVLLMYLVMSLVLTIGMRLLERR 231



 Score = 39.7 bits (91), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S +   +L G V T  +A  G + A I+G L    RL     + W+  VYVE+FR    L
Sbjct: 27  SLFLPGLLQGAVLTIEIAILGSLLAVIMGVLAALARLYGPAPLRWLATVYVEIFRGTSAL 86

Query: 143 VVIFFLY 149
           V +F+L+
Sbjct: 87  VQLFWLF 93


>gi|209547731|ref|YP_002279648.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533487|gb|ACI53422.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 65/108 (60%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE+ R+GL A+P GQ EAA+A+GLT  ++ RL++ PQ +R I+ P+   ++ LLK+SSL
Sbjct: 107 IAELFRAGLKAIPAGQGEAALAVGLTPVQSFRLIIFPQVVRVILAPMIVTFVALLKDSSL 166

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           A  +   +LV  G  +  +    ++I +     Y +++   ++   RL
Sbjct: 167 ASLITVNELVLTGRAMATEYFLPLQIYVAVGLCYFAIAWPFSVVSRRL 214


>gi|29831772|ref|NP_826406.1| amino acid ABC transporter permease protein [Streptomyces
           avermitilis MA-4680]
 gi|29608889|dbj|BAC72941.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 249

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 60/116 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L C   A+ +EIVR  + AV   Q EA IAL  T  +  R ++LPQA   ++PP  + 
Sbjct: 91  LTLGCTYGAYGSEIVRGAVAAVAPAQREAGIALSFTPAQRLRKIILPQAWPEMVPPFNNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + LLK ++L   +G  D+      + N TGQ+  +  + + +Y  L+ ++   M 
Sbjct: 151 LIELLKGTALVSVLGVGDITFAAQLVRNATGQSAPVYTVILVMYFVLAFLLTRVMR 206


>gi|319407435|emb|CBI81086.1| glutamate/aspartate transport system permease protein [Bartonella
           sp. 1-1C]
          Length = 233

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 71/124 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + AA+ AEI+R+G++++ +GQ  A  ALG+T+ +  R+V+LPQA R+++P   +Q
Sbjct: 108 ITFTAFEAAYFAEIMRAGILSISQGQKHAGQALGMTYWQNMRIVILPQAFRNMLPVFLTQ 167

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L ++++L  A+    L++    + N  G   E  ++    Y  +   ++  +  L  
Sbjct: 168 IIILFQDTTLVYAISGNSLLNGFDIVSNNFGVKQEAYILAAIFYFVICFTLSQIVLLLQK 227

Query: 391 KIAL 394
           KI++
Sbjct: 228 KISI 231


>gi|301155143|emb|CBW14607.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 83/154 (53%), Gaps = 5/154 (3%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +L  + P+L Q  F + G S +  +   F    I L+    +++AE  R GL AV +GQ+
Sbjct: 58  ELSRNTPLLIQVFFLYFGLSKIGLKLDGFTCGIIGLAFLGGSYMAEAFRGGLEAVSKGQI 117

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+A+++GLT  +A R V+ PQA     P + +  L L+K +S+  AV  A+L+ V   +I
Sbjct: 118 ESALSIGLTPYQAFRYVIFPQAFAIATPAIGANCLFLMKETSVISAVAVAELMFVAKEVI 177

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  E + + +  YL + + ++LF+  L  +
Sbjct: 178 GLDYKTNEALFLLVVFYLIILLPMSLFIGHLERR 211



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  LAF G++ + +IG +         K + W+ + Y+E+ RN P L+ +FFLY
Sbjct: 20  TLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFLY 73


>gi|261416889|ref|YP_003250572.1| polar amino acid ABC transporter, inner membrane subunit
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261373345|gb|ACX76090.1| polar amino acid ABC transporter, inner membrane subunit
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|302326258|gb|ADL25459.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F ++ +A S   AA+ AEI R G+ ++P+GQ EAA  LGLT  +    ++LPQ ++ ++
Sbjct: 89  RFPAVIVAFSINYAAYFAEIFRGGIQSIPKGQYEAAAMLGLTRGQTFYRIILPQVVKRVV 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS---LSIMI 381
           P   ++ + L+K++SLA  +   +L ++             + +  +F Y++   LS++ 
Sbjct: 149 PASANEVITLVKDTSLAQVIAVTELFALAKKQQAAYASIYPLFVAGVFYYIANLLLSVLF 208

Query: 382 ALFMNRLN 389
           A    +LN
Sbjct: 209 AYVERKLN 216


>gi|331017447|gb|EGH97503.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 232

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|227485353|ref|ZP_03915669.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus lactolyticus ATCC 51172]
 gi|227236644|gb|EEI86659.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus lactolyticus ATCC 51172]
          Length = 524

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 4/123 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++E+VR G+ AV  GQ EA  A+GLT+ +A   ++LPQ +++I+P L ++++
Sbjct: 384 VSINTGAYLSEVVRGGINAVDSGQFEACKAIGLTNWQAMTGIILPQTIKTILPSLGNEFV 443

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388
             +K++S+   +   +L  +  +I   T Q     LI   IYL L+  I     L   R 
Sbjct: 444 INIKDTSVLNVISVTELFFMSKSIAGSTYQYFPTYLITAVIYLVLTFTITRLLLLIERRF 503

Query: 389 NAK 391
           N +
Sbjct: 504 NDR 506


>gi|213968636|ref|ZP_03396778.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|302059835|ref|ZP_07251376.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132496|ref|ZP_07258486.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213926569|gb|EEB60122.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 232

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|323528628|ref|YP_004230780.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Burkholderia
           sp. CCGE1001]
 gi|323385630|gb|ADX57720.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. CCGE1001]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 8/153 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L +  PV G    I  S ++   + + +  +CYT+    E+ R+GL  V RGQ EAA 
Sbjct: 74  YVLFYVLPVYG----ITMSALTAGTVGIALHYACYTS----EVYRAGLNGVARGQWEAAC 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           AL L+  +  R V+LPQA+R +IP L +  + + K++ +  A+   +L+     I ++T 
Sbjct: 126 ALSLSPWRTYRGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNIGSETF 185

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +E I +    +L +S+  A  + RL   + L
Sbjct: 186 RYLEPITLAGIFFLLISVTFAQLVRRLEYGLRL 218


>gi|89094512|ref|ZP_01167451.1| ABC basic amino acid transporter, inner membrane subunit
           [Oceanospirillum sp. MED92]
 gi|89081248|gb|EAR60481.1| ABC basic amino acid transporter, inner membrane subunit
           [Oceanospirillum sp. MED92]
          Length = 230

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P L +   + FG  + VL+A+     +D+ +           +SP F++   ALS  
Sbjct: 58  RGMPELLLVLTIYFG-SSAVLMAIASLFGYDEYI----------ELSP-FVAGVTALSIA 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+  E+ RS ++ +P+GQ EAA+ALG+T  +  R ++LPQ  R  +P L + +L LLK
Sbjct: 106 FGAYATEVFRSAMMEIPKGQREAAVALGMTRFQTFRRIVLPQVWRLALPGLGNLFLVLLK 165

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +++L   +G  +L+      +  T +          +YL
Sbjct: 166 DTALVSVIGLNELMRQTAVAVGNTKEPFTFYFAAAMVYL 204


>gi|182683630|ref|YP_001835377.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|182628964|gb|ACB89912.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
          Length = 305

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 130/290 (44%), Gaps = 28/290 (9%)

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++A  G + + ++G +V   R     ++A +   Y+E+ RN P L+ +FFLY  +  +  
Sbjct: 2   YIAVWGSLGSFLLGLIVSIIRHYRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGI 61

Query: 158 IPDHSIVLPFGM-FLNNRGLS---FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF-- 211
           +    +    G+ FL    +       L    N    +    + I +S+ +  LS  F  
Sbjct: 62  VLSSEVYATLGLVFLGGSAMQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFGT 121

Query: 212 --------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTV 262
                   H +  + L  LY+    I  +P LVL+ + Y       +   FN  I G T 
Sbjct: 122 VMGIIMTSHSRIIRFLTRLYLEFIRI--MPQLVLLFIVY-----FGLARNFNINISGET- 173

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                S+ I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +    +++PQ +R 
Sbjct: 174 -----SVIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRR 228

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           ++P   +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 229 LLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTTSFWIY 278


>gi|121590873|ref|ZP_01678197.1| membrane protein [Vibrio cholerae 2740-80]
 gi|121728658|ref|ZP_01681676.1| arginine ABC transporter, permease protein [Vibrio cholerae V52]
 gi|153824338|ref|ZP_01977005.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2]
 gi|227812325|ref|YP_002812335.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|229522318|ref|ZP_04411734.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TM
           11079-80]
 gi|254226189|ref|ZP_04919784.1| arginine ABC transporter, permease protein [Vibrio cholerae V51]
 gi|262189843|ref|ZP_06048176.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae CT
           5369-93]
 gi|297580208|ref|ZP_06942135.1| membrane protein [Vibrio cholerae RC385]
 gi|298499554|ref|ZP_07009360.1| membrane protein [Vibrio cholerae MAK 757]
 gi|121547280|gb|EAX57401.1| membrane protein [Vibrio cholerae 2740-80]
 gi|121629069|gb|EAX61515.1| arginine ABC transporter, permease protein [Vibrio cholerae V52]
 gi|125621291|gb|EAZ49630.1| arginine ABC transporter, permease protein [Vibrio cholerae V51]
 gi|149741892|gb|EDM55921.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2]
 gi|227011467|gb|ACP07678.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|229340303|gb|EEO05309.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TM
           11079-80]
 gi|262034274|gb|EEY52681.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae CT
           5369-93]
 gi|297535854|gb|EFH74688.1| membrane protein [Vibrio cholerae RC385]
 gi|297541535|gb|EFH77586.1| membrane protein [Vibrio cholerae MAK 757]
          Length = 229

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%)

Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281
           +I GLP L+++   Y    Q+ F         FI G    +SP F+S  IALS   A++ 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L 
Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165

Query: 342 VAVGFADLV 350
             +G  DL+
Sbjct: 166 SLIGVTDLL 174


>gi|295102636|emb|CBL00181.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Faecalibacterium prausnitzii L2-6]
          Length = 227

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 7/133 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA +    A+ AE +R  L +VP+GQ+EA   +G++  +  R ++LPQA+R+ +P
Sbjct: 95  FPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGCCVGMSWWQIMRRIVLPQALRTAVP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++  + ++K++SLA  +  A+L   G  +  +T        I++ IY  ++++  LF 
Sbjct: 155 ALSNSLIGMVKDTSLASNITVAELFMAGQRVAART-------YIFLPIYCEVAVVYLLFC 207

Query: 386 NRLNAKIALKEKK 398
             +     L E++
Sbjct: 208 TVITKLQGLLERQ 220


>gi|319780314|ref|YP_004139790.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166202|gb|ADV09740.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 218

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 7/148 (4%)

Query: 238 IALKYQLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           IA   ++  + P L Q  F F G    G  + P  ++  +A++   AA+  EIV +GL A
Sbjct: 53  IACYVEVMRNTPFLVQLFFIFFGLPSLGVRLDP-LLAAMLAMTLNMAAYTIEIVGAGLDA 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ EAA+ALGL  R+    ++LPQA++ I P LTSQ + ++  S++   +   +L  
Sbjct: 112 VPGGQTEAALALGLRPRQVFVKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSI 379
               +  +T ++ E   +   +YL+LS+
Sbjct: 172 EADMLQARTFRSFETYFVVTLVYLALSM 199


>gi|301169917|emb|CBW29521.1| arginine transporter subunit [Haemophilus influenzae 10810]
          Length = 221

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F     ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|229514204|ref|ZP_04403665.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TMA
           21]
 gi|229348184|gb|EEO13142.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TMA
           21]
          Length = 229

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%)

Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281
           +I GLP L+++   Y    Q+ F         FI G    +SP F+S  IALS   A++ 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L 
Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165

Query: 342 VAVGFADLV 350
             +G  DL+
Sbjct: 166 SLIGVTDLL 174


>gi|293378561|ref|ZP_06624724.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|292642890|gb|EFF61037.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 159

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 74/128 (57%), Gaps = 1/128 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA     AA+ AEI R G+ ++P+GQ EAA  L L+  +    +++PQ  + ++
Sbjct: 29  RFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVL 88

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + ++ +NL+K+SSL   +G  D++  G   + +    + ++ + + IYL+L+ ++ + 
Sbjct: 89  PSVGNEVINLVKDSSLIYILGLGDVMRAGKIAMERDATLLPLLGVAI-IYLTLTGILTIV 147

Query: 385 MNRLNAKI 392
           M ++  K+
Sbjct: 148 MKQVEGKL 155


>gi|330825797|ref|YP_004389100.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|329311169|gb|AEB85584.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 220

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 4/126 (3%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L +AL C  +AF A+ +RSG+  +P GQ+EAA++LGL   +    V+LPQA+R+++ P+T
Sbjct: 93  LTLALVC--SAFTADYLRSGINTIPGGQIEAALSLGLRPMRIISAVVLPQALRAVVQPMT 150

Query: 329 SQYLNLLKNSSLAVAVGFA--DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           S  + L+ ++SLA  V F   +L ++   I   +   I    +   +Y++  ++IA    
Sbjct: 151 SLLIALMLSTSLASQVPFPGRELTALVSKIATDSAAGIPAFAVAAAMYVATGLLIAWAGA 210

Query: 387 RLNAKI 392
            L  K+
Sbjct: 211 ALEKKV 216


>gi|308068847|ref|YP_003870452.1| Probable amino-acid ABC transporter permease protein ytmM
           [Paenibacillus polymyxa E681]
 gi|305858126|gb|ADM69914.1| Probable amino-acid ABC transporter permease protein ytmM
           [Paenibacillus polymyxa E681]
          Length = 236

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 11/176 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L     + F LP L+    K   HF  P+         S   P  +   I+ S  
Sbjct: 63  RGTPMLMHLLLIYFSLPLLIDAGAK---HFGWPL--------QSKDVPYMVFALISFSIT 111

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++E+VRSG+ +V +GQ+EAA A+G+T  +  R ++ PQA    +P LT+  + +L 
Sbjct: 112 SGAYMSEVVRSGIQSVNKGQIEAAYAVGMTTWQVLRRIVFPQAFVVSLPNLTNSVIGMLH 171

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            S+LA  V   ++ +    + +   + +E+ +    ++  L+++I      +  KI
Sbjct: 172 GSTLAFTVSVTEIQAQAEILASTNWKYLEVYIAAALLFWGLTVLIERISGLVEKKI 227


>gi|312114909|ref|YP_004012505.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220038|gb|ADP71406.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 214

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 1/126 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  +AL+    A+ +E++ + L AV RGQ+EAA + G++ R+  R V LPQ +R
Sbjct: 77  VSP-FVAGLVALALVFGAYSSEVILAALNAVERGQIEAARSFGMSPRQVFRRVRLPQMLR 135

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L + +L LLK++SL   +  +DL+      +  T +  +   +   IYL+++ + 
Sbjct: 136 FALPGLGNNWLVLLKDTSLVSVIALSDLLRETTIAVQATREPFKFYAVACVIYLAMTALS 195

Query: 382 ALFMNR 387
            L + R
Sbjct: 196 TLAIAR 201


>gi|302560484|ref|ZP_07312826.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           griseoflavus Tu4000]
 gi|302478102|gb|EFL41195.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           griseoflavus Tu4000]
          Length = 233

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 63/122 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AEIVR  L AV   Q E  IAL  T  +  +L+LLPQA+  +IPP ++ 
Sbjct: 88  LALGLTYGAYGAEIVRGALAAVDPAQREGGIALSFTPWQRMKLILLPQAVPEMIPPFSNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL   G  +     ++ EI    + IY  ++ ++   M  L  
Sbjct: 148 LIELLKGTALVSIMGMGDLAFSGNLVRLALQESAEIYTYILLIYFVIAFLLTRSMRGLEK 207

Query: 391 KI 392
           K+
Sbjct: 208 KL 209


>gi|218659451|ref|ZP_03515381.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli IE4771]
          Length = 128

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 68/124 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + ++ + EIVR  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P   + 
Sbjct: 3   LALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNT 62

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              ++K S+L   +G A+L+     II++   +++   +   +Y  ++  I  F   +  
Sbjct: 63  AAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVER 122

Query: 391 KIAL 394
           K AL
Sbjct: 123 KTAL 126


>gi|312963774|ref|ZP_07778245.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311281809|gb|EFQ60419.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 216

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP +++  IAL+ +T+A++AEI R  + ++  GQ EA+ +L L   +  R V+LPQ
Sbjct: 80  GVDISP-WLAAAIALTLFTSAYLAEIWRGCVDSIAHGQWEASASLALNPLEQLRYVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   GG + N T
Sbjct: 139 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 180


>gi|284163417|ref|YP_003401696.1| polar amino acid ABC transporter inner membrane protein
           [Haloterrigena turkmenica DSM 5511]
 gi|284013072|gb|ADB59023.1| polar amino acid ABC transporter, inner membrane subunit
           [Haloterrigena turkmenica DSM 5511]
          Length = 339

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 5/172 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIA 282
           T LI G P L  + + Y   +    L   + IG   V PE+ + +IA+  +T   +A+ A
Sbjct: 148 TELIRGTPLLAQLFVLYYTPYLSVRLSDVDLIGRGFV-PEY-AFWIAIVGFTINGSAYQA 205

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R  L +V  GQ+ AA A+GL+  +  R V+LPQ +R  IP  T++ + L+K SSLA 
Sbjct: 206 EYIRGALESVDEGQLTAARAIGLSKLEGIRHVVLPQTLRYGIPAWTNELVYLIKYSSLAG 265

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   +L      I + T +   I ++   +Y+ L +     M+R+  ++A+
Sbjct: 266 FITVPELYYRASDIASSTFEYTPIYVLLGLVYIGLVLSATNVMSRVERRVAV 317


>gi|218458226|ref|ZP_03498317.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Kim 5]
          Length = 202

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 61/108 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  EI+R G+ ++ +GQ+EA  ALGL      RL++L  A+R+I P LTSQ
Sbjct: 95  IALGINGGAYAIEIIRGGVESISKGQIEAGFALGLHKGDVFRLIVLKPALRAIYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           ++ L   +S+  ++   +L S    I + T ++ E+      IYL +S
Sbjct: 155 FVMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFTVTAIYLVIS 202


>gi|167847334|ref|ZP_02472842.1| thiamine monophosphate kinase [Burkholderia pseudomallei B7210]
          Length = 373

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 239 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 298

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 299 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 334


>gi|15835727|ref|NP_300251.1| ABC amino acid transporter permease [Chlamydophila pneumoniae J138]
 gi|8978565|dbj|BAA98402.1| ABC amino acid transporter permease [Chlamydophila pneumoniae J138]
          Length = 217

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 65/104 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS  +AA++AE +R G+ ++  GQ E+A+ LG    +    ++ PQ  ++I+P LT++
Sbjct: 92  IALSMNSAAYLAENIRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +++L+K SS+ + VG  +L  V   I+++    +E+ LI   +Y
Sbjct: 152 FVSLIKESSILMVVGVPELTKVTKDIVSRELNPMEMYLICAGLY 195


>gi|308235036|ref|ZP_07665773.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
          Length = 225

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 106/216 (49%), Gaps = 29/216 (13%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R+    + +  K +PL  I  F++ G    V   LK   
Sbjct: 29  LFSTILGVILVMMRICPIHSLRIIASAYVEFFKNMPLTIIMVFMVLG----VYAQLK--- 81

Query: 245 HFDKPVLGQFNFIGGSTV-SPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                       +G STV S  F  L IA LS YTAAF+ E +RSGL  VP GQ EA  A
Sbjct: 82  ------------LGFSTVFSVNFFWLAIAGLSFYTAAFVCESLRSGLNTVPLGQAEACRA 129

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQT 360
           LGL   ++   V+LPQ     + PL + ++ LLKNS++A A   A   S  +   I    
Sbjct: 130 LGLNFFQSAFNVILPQTFCGSVAPLGNTFIALLKNSTVAAAASVATETSTLMSEMIERHA 189

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              + I LI+   Y+ L I I +F   L+ K+A++ 
Sbjct: 190 DLIVPIFLIFACGYIVLIIPIGIFTTYLSNKLAVRR 225


>gi|227878268|ref|ZP_03996232.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844162|ref|ZP_05549649.1| ABC transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256850466|ref|ZP_05555893.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|262047795|ref|ZP_06020746.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|293381403|ref|ZP_06627402.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|312976725|ref|ZP_07788474.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus CTV-05]
 gi|227862138|gb|EEJ69693.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256614067|gb|EEU19269.1| ABC transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256712671|gb|EEU27665.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|260571924|gb|EEX28494.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|290922011|gb|EFD99014.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|310896053|gb|EFQ45118.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus CTV-05]
          Length = 215

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 1/128 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P + +   A     AA+ AEI R G  ++  GQ EAA  L L+  +    +++PQ ++
Sbjct: 82  VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLSRWQTMTKIIIPQVIK 141

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P + ++ +NL+K+SSL   +G  DL+  G   + +    + ++L+ + IYL L  + 
Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLLLISIC 200

Query: 382 ALFMNRLN 389
           A  + +L 
Sbjct: 201 AFVLKKLE 208


>gi|226196429|ref|ZP_03792011.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|225931646|gb|EEH27651.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
          Length = 247

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 94  PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|222081581|ref|YP_002540945.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726260|gb|ACM29349.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 216

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 3/111 (2%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F +EI R+GL+AVPRGQ+EAA  LGLT  +    + +PQA+R+++P L  +   L+KNSS
Sbjct: 98  FQSEIYRAGLLAVPRGQIEAAEMLGLTAAQTFLCIEVPQAVRTMLPALVGEMQALVKNSS 157

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA---LFMNR 387
           L   +   D+      +   T + +E     + +Y+++   +A   L M R
Sbjct: 158 LVSVIAVMDVTRRAQQVAASTFRPLEAYASALLLYVAVGAALAGIGLLMER 208


>gi|300858067|ref|YP_003783050.1| glutamate ABC transporter permease [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685521|gb|ADK28443.1| glutamate ABC transport system permease protein [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205789|gb|ADL10131.1| glutamate ABC-type transporter, permease component [Corynebacterium
           pseudotuberculosis C231]
 gi|302330348|gb|ADL20542.1| glutamate ABC-type transporter, permease component [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276024|gb|ADO25923.1| glutamate ABC-type transporter, permease component [Corynebacterium
           pseudotuberculosis I19]
          Length = 228

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 74/123 (60%), Gaps = 3/123 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF++E +RSG+  V  GQ EAA +LGL+  +    ++ PQA+R+ I PL +  + L 
Sbjct: 107 YTSAFVSECLRSGINTVDFGQAEAARSLGLSFSQTFNKIIFPQAIRAAIVPLGNTLIALT 166

Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           KN+++A  + VG A L+ +   I N   Q   I   +   +++L++ +  F+  L+ ++A
Sbjct: 167 KNTTIASVIGVGEASLL-MKEVIENHASQLFVIFGCFALGFMALTLPMRYFLGALSTRMA 225

Query: 394 LKE 396
           +K+
Sbjct: 226 VKK 228


>gi|298290397|ref|YP_003692336.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926908|gb|ADH87717.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 238

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 67/123 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++LS +  A   E  RSGL ++P    EAA +LG +     R + +P A R  +P LT+ 
Sbjct: 108 VSLSLFGGALCIEAFRSGLESLPHSVTEAARSLGYSRWARFRRIEMPIASRICLPALTNI 167

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             NL K +S A  +   +L+   G I N T +  E++L+ + IY+SL  +++  M+R+  
Sbjct: 168 LTNLFKTTSQASVITVPELMYYAGQIYNDTFRTAEVMLLVLLIYVSLVSLLSWGMSRIEQ 227

Query: 391 KIA 393
            +A
Sbjct: 228 ALA 230



 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 20/150 (13%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA-GRLSANKLVAWI---CRVYVE 134
           + SD  Y   +L G + T  LA +    ++ I  L+GA G L+ +  +AW+     ++VE
Sbjct: 8   WLSDPVYQDWLLRGTLTTIGLALA----SSAIAILIGAFGALALSLRIAWLDALIELFVE 63

Query: 135 VFRNIPPLVVIFFLYKSVLSV-LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +FRN PPL+ + F Y ++ ++ L + D +            GLS P L+    A + +  
Sbjct: 64  LFRNTPPLLQMLFFYFTLSTIGLRVTDPAT-----------GLSVPLLSAFDCALVSLSL 112

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           F   + +  F + L    H  T  A  L Y
Sbjct: 113 FGGALCIEAFRSGLESLPHSVTEAARSLGY 142


>gi|296157668|ref|ZP_06840502.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891914|gb|EFG71698.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 18/209 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +F  + G VL+L         H +    +  +Y+S  ++ G P LV I   + +++  P
Sbjct: 29  MIFGLIAGAVLALMGVS-----HSRVLNWIARIYVS--VMRGTPLLVQI---FVIYYGLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                +F  G ++ P    + IALS   AA+++E +R  ++ + +GQ  AA +LGL+ R+
Sbjct: 79  -----SF--GISLDPTPAGV-IALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLSRRQ 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L 
Sbjct: 131 TLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +Y  L  ++         ++AL  + 
Sbjct: 191 AAAVYWVLCQVLESVQRWYERRLALPSRH 219



 Score = 37.0 bits (84), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T   A   MI   I G ++    +S ++++ WI R+YV V R  P LV IF +Y  
Sbjct: 17  GAVLTVKFAVLSMIFGLIAGAVLALMGVSHSRVLNWIARIYVSVMRGTPLLVQIFVIYYG 76

Query: 152 V----LSVLPIPDHSIVL 165
           +    +S+ P P   I L
Sbjct: 77  LPSFGISLDPTPAGVIAL 94


>gi|254518098|ref|ZP_05130154.1| amino acid permease [Clostridium sp. 7_2_43FAA]
 gi|226911847|gb|EEH97048.1| amino acid permease [Clostridium sp. 7_2_43FAA]
          Length = 224

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 30/213 (14%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           V S +LG++  +  T      ++    + ++ + +PL+       FG+PTL+       +
Sbjct: 34  VLSTILGVIFGIIMTSKRKVVKVISTIYLESIRIIPLMVWLFLFYFGVPTLL------NI 87

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H +  ++G                 YI  + +  A I ++VR  + ++P+   E+A+AL 
Sbjct: 88  HLESTIVG-----------------YIVFTLWGTAEIGDLVRGAITSIPKIYYESAMALS 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   K  R +++P ++R ++P + +    ++K ++L   +G  DLV VG  II +T    
Sbjct: 131 LNKIKTYRYIIIPVSIRRVMPGIINLSTRMIKTTTLMTLIGAVDLVKVGQQIIERTVLTE 190

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   W++  L +   +  F   L AK AL++K
Sbjct: 191 PLASFWIYGVLLIIYFLICFPISLGAK-ALEKK 222


>gi|89258356|gb|ABD65399.1| putative amino acid ABC transporter permease protein [Ochrobactrum
           anthropi]
          Length = 254

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 18/204 (8%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +I   + +LG+ ++  L A RLSR       + L   Y+S F   G P LV +   + L+
Sbjct: 22  QISALALILGLAVAAILVAGRLSR---SPILRGLAAAYVSVFR--GTPCLVQL---FILY 73

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P +G         + P F +  I L     A+++E +R  + +V RGQ EAA ++G 
Sbjct: 74  FGGPQIG-------INLEP-FAAGVIGLGLNIGAYMSESIRGAIQSVDRGQSEAARSIGF 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  R V+LPQA R +I PL    + LLK S+L   +   +L       I  T +  E
Sbjct: 126 GRGQTMRFVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTYTAQRFIGSTYKPFE 185

Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389
           I  +   +Y+ +  ++A  ++ L+
Sbjct: 186 IFGVAAVLYMIIIYIVARGVDLLD 209


>gi|34499507|ref|NP_903722.1| amino acid ABC transporter permease [Chromobacterium violaceum ATCC
           12472]
 gi|34105357|gb|AAQ61712.1| probable amino acid ABC transporter, permease protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 220

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 71/128 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+++E +R G+  V +GQ +AA +LG T  +  R ++ PQA+R  +P L++ 
Sbjct: 93  LALTLNVAAYLSESLRGGIAGVAKGQWDAAFSLGFTWWQTMRHIIAPQALRLSVPSLSNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     +I QT Q + + L    IY  LS +       +  
Sbjct: 153 LISLIKDTSLVSVITVTELMLATKEVIAQTFQPLPLYLAAAAIYWLLSALFERLQRHVEN 212

Query: 391 KIALKEKK 398
           ++ L  ++
Sbjct: 213 RLNLAHQR 220


>gi|320546644|ref|ZP_08040956.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448699|gb|EFW89430.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 213

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 53/91 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+ A+P+GQ EAA  L L   +    ++LPQ  + ++P + ++
Sbjct: 89  LAFTLNYAAYFAEIFRGGISAIPKGQYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 149 IINLVKDSSLVYVLGVGDLLLASKTAANRDA 179


>gi|28869033|ref|NP_791652.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|28852273|gb|AAO55347.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 232

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|330879703|gb|EGH13852.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 232

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 11/167 (6%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S   P   S      +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFFWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
           SLA  V   D+     T+  Q     E  +     YL L+ I++ LF
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLF 216


>gi|283954241|ref|ZP_06371765.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283794259|gb|EFC33004.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 449

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 14/194 (7%)

Query: 191 VFSFVLG---IVLSLFATRLSRH---FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++  F  ++  +    + +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMGYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA +AL
Sbjct: 82  HLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIKKQQFEAGLAL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILIWMFIYLSL 377
            E++ +    YL +
Sbjct: 202 DELLFLLFMGYLCI 215



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   V++PQA+R + P   + 
Sbjct: 323 IVFSIWGCFEMMDLVRISLQSIPKHQYESASSLGLNTVQSFVYVIIPQAVRRLTPMSMNL 382

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+ +L   I L+  
Sbjct: 383 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFTLCYPITLYSR 442

Query: 387 RLNAK 391
           +L  K
Sbjct: 443 KLEKK 447


>gi|257063425|ref|YP_003143097.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
 gi|256791078|gb|ACV21748.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
          Length = 220

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 60/99 (60%), Gaps = 4/99 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+  EI RSG+ ++PRGQ EAA  LG T  +    ++LPQ ++ I+P + ++ + L+K+
Sbjct: 102 SAYFGEIYRSGIQSIPRGQYEAAEVLGYTKVQTFMYIILPQVIKRILPAMGNEIIALVKD 161

Query: 338 SSLAVAVGFADLVSVGGTI----INQTGQAIEIILIWMF 372
           +SLA  +G A++ +    +    ++    AI  ++ W+F
Sbjct: 162 TSLAFVLGVAEMFTFAKALAAKHVSMLPYAIAAVIYWIF 200


>gi|163856555|ref|YP_001630853.1| glutamine ABC transporter permease protein [Bordetella petrii DSM
           12804]
 gi|163260283|emb|CAP42585.1| glutamine transport system permease protein [Bordetella petrii]
          Length = 219

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 14/192 (7%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           S P L   T    KI  +  V G +L   A  ++R +  +   A+  +YI+  +I G P 
Sbjct: 11  SMPNLLDGTLMTVKITFWGLVGGFLLGALAG-VARAYGPRLLSAIAQVYIA--VIRGTPI 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   Y   F  P++     + G  V   + ++   L   + A+IAEIVR  L++V +
Sbjct: 68  VVQVMFIY---FALPLM-----VPGLRVDAIWAAIA-TLIINSGAYIAEIVRGSLLSVHK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK+SSL + +G A+L   G 
Sbjct: 119 GLKEAGQAMGLPFYKILLHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVAELTRQGQ 178

Query: 355 TIINQTGQAIEI 366
            I+    +A+EI
Sbjct: 179 EIMASNFRAVEI 190



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 34/61 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F G++   ++G L G  R    +L++ I +VY+ V R  P +V + F+
Sbjct: 15  LLDGTLMTVKITFWGLVGGFLLGALAGVARAYGPRLLSAIAQVYIAVIRGTPIVVQVMFI 74

Query: 149 Y 149
           Y
Sbjct: 75  Y 75


>gi|111221812|ref|YP_712606.1| amino acid ABC transporter membrane protein [Frankia alni ACN14a]
 gi|111149344|emb|CAJ61032.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Frankia alni ACN14a]
          Length = 248

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 21/134 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP++ +   + FG+P L L  L        P++     +GG+           AL   
Sbjct: 69  RGLPVILVLYLVGFGVPALRLRGLP-----TDPLV-----LGGA-----------ALVLT 107

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+ R+G+ +V   Q+ AA +LGLTH +  R V+LPQA+R + PPL +  ++L K
Sbjct: 108 YSAYVAEVFRAGIESVHPSQVAAARSLGLTHAQTMRRVVLPQAVRRVTPPLLNDAISLQK 167

Query: 337 NSSLAVAVGFADLV 350
           +SSL   +G  D V
Sbjct: 168 DSSLVSVLGVVDAV 181


>gi|153829863|ref|ZP_01982530.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39]
 gi|148874664|gb|EDL72799.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39]
          Length = 229

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 16/129 (12%)

Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281
           +I GLP L+++   Y    Q+ F         FI G    +SP F+S  IALS   A++ 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L 
Sbjct: 106 SQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165

Query: 342 VAVGFADLV 350
             +G  DL+
Sbjct: 166 SLIGVTDLL 174


>gi|91787333|ref|YP_548285.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696558|gb|ABE43387.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 216

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 11/164 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G+P +V++   + L+F  P +G    I  S +    + L IA S Y A    E  R+
Sbjct: 61  LLRGIPIIVIL---FFLYFVMPDVG----ISLSALQAGILGLGIAYSAYQA----ENFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV  GQ+EAA A+G++     R V+LPQA++ ++PP  +  + +LK+SS A  +  A
Sbjct: 110 GIEAVDHGQVEAARAMGMSWGLMMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVA 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   G  I   T Q   +  +   IYL + + + L +  L  +
Sbjct: 170 ELALQGKMIATSTFQNATVFTLVALIYLVMCVPLILLVRHLEKR 213


>gi|76809245|ref|YP_333449.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei 1710b]
 gi|126440194|ref|YP_001058921.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 668]
 gi|126451643|ref|YP_001066164.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 1106a]
 gi|134282328|ref|ZP_01769033.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|217421609|ref|ZP_03453113.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
 gi|242317304|ref|ZP_04816320.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254188734|ref|ZP_04895245.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254198163|ref|ZP_04904585.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|254260903|ref|ZP_04951957.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|76578698|gb|ABA48173.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei 1710b]
 gi|126219687|gb|ABN83193.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 668]
 gi|126225285|gb|ABN88825.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|134246366|gb|EBA46455.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|157936413|gb|EDO92083.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|169654904|gb|EDS87597.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|217395351|gb|EEC35369.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
 gi|242140543|gb|EES26945.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254219592|gb|EET08976.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
          Length = 247

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 94  PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|116050135|ref|YP_791048.1| amino acid ABC transporter permease [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296389385|ref|ZP_06878860.1| amino acid ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313110964|ref|ZP_07796804.1| putative amino acid permease [Pseudomonas aeruginosa 39016]
 gi|115585356|gb|ABJ11371.1| putative amino acid transport system permease [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310883306|gb|EFQ41900.1| putative amino acid permease [Pseudomonas aeruginosa 39016]
          Length = 225

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 59/97 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ ++P GQ  AA ALGL   +  RLV+LPQA+  +
Sbjct: 94  PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +P   +Q+++L+K++SLA  +G  +L  V   + N+ 
Sbjct: 154 LPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRV 190


>gi|330957731|gb|EGH57991.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 242

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 65  IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 121 YFTETFRGAILSVPRGQIEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216


>gi|257870688|ref|ZP_05650341.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804852|gb|EEV33674.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 214

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 31/206 (15%)

Query: 193 SFVLGIVLS-LFATRLS-----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           S  LGI+L+ + A+RL         +    +  PLL    F+ +GLP L ++       F
Sbjct: 30  SIPLGIILAFILASRLRILKAIVQVYVWLMRGTPLLLQLIFVFYGLPILNIV-------F 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D+                 F +  IA     AA+ AEI R G+ ++P GQ EAA  L L 
Sbjct: 83  DR-----------------FEAALIAFIINYAAYYAEIFRGGIQSIPAGQYEAAKVLRLA 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +++PQ ++  +P + ++ +NL+K++SL   +G +D++ +G   + +    + +
Sbjct: 126 PLQTIRKIIIPQVVKITLPSVGNEVINLVKDTSLVYILGLSDVMRIGKIAMERDSTLVPL 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           + + + IYL ++ +  L + +L  K+
Sbjct: 186 LGVAL-IYLMMTGIFTLILKQLETKL 210


>gi|153954685|ref|YP_001395450.1| hypothetical protein CKL_2067 [Clostridium kluyveri DSM 555]
 gi|146347543|gb|EDK34079.1| Hypothetical protein CKL_2067 [Clostridium kluyveri DSM 555]
          Length = 253

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I  FS V+ +V+ +  T  ++    K  + +  +YIS   + G P +V + L +     
Sbjct: 40  EILFFSVVIALVVGMILT-YAKVGKNKVVRCIASIYIS--FMRGTPMIVQLLLAF---IG 93

Query: 248 KPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            P++   +  G ST +    +   IA S   AAF AEI RS  + + +GQ+EA  ++G+T
Sbjct: 94  IPLI--LDSFGISTANWNNIIYAIIAFSLNEAAFFAEIFRSAYLDIDKGQIEAGQSIGMT 151

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI-INQTG-QAI 364
             +  R ++  Q     +P  T+  + L+KN+SL +A+G  DL+ +   I  N  G    
Sbjct: 152 KFQTFRRIIFVQVAAKALPNTTNMIIELMKNTSLGIAIGVTDLMGMAKQISYNNYGVGQT 211

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           E  ++  FIY  + +++ +  + + A++
Sbjct: 212 ETFIVAAFIYWIMGLILTIVSSNITARL 239


>gi|126434726|ref|YP_001070417.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126234526|gb|ABN97926.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. JLS]
          Length = 292

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 72/118 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ Y  A IAEIVR+G+ A+PRGQ EAA ALGL   +  R +LLPQA+ S++P L SQ 
Sbjct: 146 GLTLYNGAVIAEIVRAGVKALPRGQAEAASALGLRWGQTQRSILLPQAVTSMLPVLVSQL 205

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +LK++++   + F ++V  G  + +  G  I  +++   + +S++  ++    +L 
Sbjct: 206 VVVLKDTAIGYQITFVEMVRQGTVVGSSYGNYIPALMVIAVLMISVNFALSALATKLE 263



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 19/128 (14%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNME-KSNLSLGIGFLSERAGFEIDQGIVPYTS 81
           R  N+ + +I  L +T + +W V   Y+ ++ K  L+         A +E      P+ +
Sbjct: 15  RRRNVVITLI-TLAITALIVWVV---YSRLDAKGQLT--------AAKWE------PFLT 56

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            + + T +L G   T   A   ++ A I+G  +G GRLS    + W+C V VE FR +P 
Sbjct: 57  PNLWTTYVLPGVQGTLTAAAVSIVLALILGFGLGVGRLSVITPIRWVCAVIVEFFRAVPV 116

Query: 142 LVVIFFLY 149
           L+++ F Y
Sbjct: 117 LIMMIFAY 124


>gi|15597398|ref|NP_250892.1| amino acid permease [Pseudomonas aeruginosa PAO1]
 gi|107101629|ref|ZP_01365547.1| hypothetical protein PaerPA_01002673 [Pseudomonas aeruginosa PACS2]
 gi|218891845|ref|YP_002440712.1| putative amino acid permease [Pseudomonas aeruginosa LESB58]
 gi|254235228|ref|ZP_04928551.1| hypothetical protein PACG_01119 [Pseudomonas aeruginosa C3719]
 gi|254240624|ref|ZP_04933946.1| hypothetical protein PA2G_01283 [Pseudomonas aeruginosa 2192]
 gi|9948224|gb|AAG05590.1|AE004646_11 probable amino acid permease [Pseudomonas aeruginosa PAO1]
 gi|126167159|gb|EAZ52670.1| hypothetical protein PACG_01119 [Pseudomonas aeruginosa C3719]
 gi|126194002|gb|EAZ58065.1| hypothetical protein PA2G_01283 [Pseudomonas aeruginosa 2192]
 gi|218772071|emb|CAW27850.1| probable amino acid permease [Pseudomonas aeruginosa LESB58]
          Length = 225

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 59/97 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ ++P GQ  AA ALGL   +  RLV+LPQA+  +
Sbjct: 94  PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +P   +Q+++L+K++SLA  +G  +L  V   + N+ 
Sbjct: 154 LPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRV 190


>gi|195978013|ref|YP_002123257.1| amino acid ABC transporter membrane-spanning permease
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974718|gb|ACG62244.1| amino acid ABC transporter membrane-spanning permease
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 209

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 53/91 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ AEI R G+  +P GQ EAA  L L+  +  R V+LPQ  + ++P + ++
Sbjct: 85  LAFTLNYAAYFAEIFRGGIETIPNGQYEAAKVLKLSPVQTVRYVILPQVFKIVLPSVFNE 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            +NL+K+SSL   +G  DL+    T  N+  
Sbjct: 145 VINLVKDSSLVYVLGVGDLLLASKTAANRDA 175


>gi|325836760|ref|ZP_08166227.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|325491138|gb|EGC93427.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 225

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 13/190 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +    +I + S ++ +VL L    L R    K  + +  LY++T  I  +P LVL+ L Y
Sbjct: 22  LGVTLEISLISVMISVVLGLVMGMLMR-VKTKVVRLICRLYLNTVRI--VPQLVLLFLAY 78

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                K          G  +S E  S+ +  S +  A + ++VR  L ++P+ Q E A+A
Sbjct: 79  -FGLSKSF--------GINLSGEVASI-LVFSFWGIAEMGDLVRGALDSIPKHQYETALA 128

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GL  R+  + +++PQ +R ++P   +    ++K +SL V +G  ++V VG  II  +  
Sbjct: 129 IGLNQRQIYQYIIIPQTIRRLLPQTINLVTRIIKTTSLIVLIGVVEVVKVGQQIIEASRL 188

Query: 363 AIEIILIWMF 372
            +    +W++
Sbjct: 189 TVPTAALWIY 198


>gi|261820368|ref|YP_003258474.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261604381|gb|ACX86867.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 249

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 1/116 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F  + IALS    AF+AEI+R+G+ AVPR  +EAA +LG    +A   ++LP A R
Sbjct: 113 VSP-FQFVVIALSLQYGAFVAEILRAGIEAVPRTTVEAAESLGYNRPRAMIHIILPLAFR 171

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           + +P L +    ++K+++LA A+   + + V   I  +    +E++ + +  YL L
Sbjct: 172 TSLPALGNNMAQIVKSTALAYAIAVPEALYVAHEIWTEHFNVLEMMNVVLLSYLGL 227


>gi|315640083|ref|ZP_07895208.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484211|gb|EFU74682.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 536

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 53/81 (65%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA A+G+ HR+    V+LPQ +R+I+P + ++ +
Sbjct: 400 VSINTGAYMSEIVRGGIFAVDKGQFEAAQAIGMNHRQTMTKVVLPQVLRNILPAIGNETV 459

Query: 333 NLLKNSSLAVAVGFADLVSVG 353
             +K++++   +   DL   G
Sbjct: 460 INIKDTAVLSVISVTDLFFAG 480


>gi|268608242|ref|ZP_06141969.1| polar amino acid ABC transporter, inner membrane subunit
           [Ruminococcus flavefaciens FD-1]
          Length = 164

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 247 DKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           D P   Q NF+ G  +  +   F  + +A     AA+ AEI R G+ +VP GQ EAA AL
Sbjct: 14  DVPXFLQ-NFLNGIDIKTDTYTFRMILVAFVLNYAAYFAEIFRGGIESVPIGQYEAAGAL 72

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +  +    ++LPQ ++ ++P  +++ + L+K++SLA A+ + +++ +    +      
Sbjct: 73  GFSRTQTFFRIILPQVIKRVVPASSNEIITLVKDTSLASAIPYMEVMYIAKKQVPTYASL 132

Query: 364 IEIILIWMFIYLSLSIMIALF 384
           + + +  +F ++  +++  LF
Sbjct: 133 MPLFMAGLFYFIFATVLTLLF 153


>gi|161524064|ref|YP_001579076.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189351175|ref|YP_001946803.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|160341493|gb|ABX14579.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189335197|dbj|BAG44267.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 229

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 17/164 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFD 247
           SF+LG+V +  A +LSR+   +    +  +Y  T LI G+P LVL+     +L+  L+  
Sbjct: 28  SFLLGLVGA--AAKLSRN---RIANGVGTVY--TTLIRGVPDLVLMLLLFYSLQIWLNMA 80

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              LG         + P F++  + L     A+  E  R   ++VPRGQ+EA  A G+T+
Sbjct: 81  TDALGWDQI----DIDP-FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTN 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            +    ++ PQ MR  +P + + +  L+K+++L   +G AD+V 
Sbjct: 136 WQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179


>gi|70730425|ref|YP_260166.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344724|gb|AAY92330.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 241

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 2/128 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      L +        + P F++  + L     A+  E 
Sbjct: 66  TTLIRGVPDLVLMLLIFYSLQGWLTALTELLDWPYMEIDP-FVAGIVTLGFIYGAYFTET 124

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  +++VPRGQ EAA A GL+  +  R V+ PQ MR  +P L + +L LLK ++L   +
Sbjct: 125 FRGAILSVPRGQQEAAAAFGLSRMQRFRHVVFPQMMRFALPSLGNNWLVLLKATALVSII 184

Query: 345 GFADLVSV 352
           G  DLV V
Sbjct: 185 GLTDLVKV 192


>gi|284032886|ref|YP_003382817.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283812179|gb|ADB34018.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 293

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 54/80 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    ++++AE+ R+G+ ++   Q  AA +LGL+HR+  R V+LPQA+R ++PPL + 
Sbjct: 163 VALVLTYSSYVAEVFRAGIESIHPSQRAAARSLGLSHRQTLRFVVLPQAVRRVLPPLLND 222

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           +++L K+S L   +G  D +
Sbjct: 223 FVSLQKDSGLIAVLGVIDAI 242


>gi|224371423|ref|YP_002605587.1| GltK2 [Desulfobacterium autotrophicum HRM2]
 gi|223694140|gb|ACN17423.1| GltK2 [Desulfobacterium autotrophicum HRM2]
          Length = 221

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 87/168 (51%), Gaps = 10/168 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P +++I   + ++F  PV     F+G S    E  ++ ++   Y AA+ AEI+R+G+ 
Sbjct: 62  GIPLILVI---FWIYFLVPV-----FLGRSL--GELPAVVLSFILYEAAYFAEIIRAGIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ  A +A GL     T  V+LPQA+  ++P L +  + + +++SLA  +G  + +
Sbjct: 112 AVPVGQKRAGLATGLRPWDLTVHVILPQALSKMVPALITHCVVVFQDTSLAYVIGLREFL 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +  +  +++E+ L    +Y  +  + +   + L  +   KE  
Sbjct: 172 RRVNLVDAREARSVELYLFAACVYFIICTLGSFLGHYLEHRSKAKEAS 219



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   TF +A   +    + G L+G GRLS+ +LV +   +Y+  FR IP ++VIF++Y
Sbjct: 16  GLWLTFEIAVMAITGGLVWGILLGLGRLSSIRLVYYPASIYIHFFRGIPLILVIFWIY 73


>gi|256832816|ref|YP_003161543.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
 gi|256686347|gb|ACV09240.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
          Length = 224

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 45/67 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++LS Y A+F  E +RSG+  VP GQ EAA A+GL+   A RLV++PQA R  I PL + 
Sbjct: 98  LSLSVYHASFFCEAIRSGVNTVPVGQAEAARAIGLSFLPAARLVIMPQAFRGAIAPLGNT 157

Query: 331 YLNLLKN 337
            + L+KN
Sbjct: 158 IIALIKN 164


>gi|167903853|ref|ZP_02491058.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei NCTC 13177]
          Length = 219

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+   +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRHVICPQALCLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L    IY  LS ++A    R+  + AL    
Sbjct: 189 LAAAAIYWVLSTLLARLQGRIETRCALPSAH 219



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F +Y  
Sbjct: 17  GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                 +PD       G+ L+       TLT++  A
Sbjct: 77  ------LPD------IGISLDPTAAGIFTLTLNAGA 100


>gi|329124092|ref|ZP_08252639.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus aegyptius ATCC 11116]
 gi|327467517|gb|EGF13015.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus aegyptius ATCC 11116]
          Length = 221

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F     ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|222152717|ref|YP_002561893.1| amino acid ABC transporter permease [Streptococcus uberis 0140J]
 gi|222113529|emb|CAR41315.1| putative amino acid ABC transporter, permease protein
           [Streptococcus uberis 0140J]
          Length = 215

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 4/126 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL  V  GQ EA +A G +  +   L++ PQA R ++P + SQ+
Sbjct: 87  AFTVFTSAALAEIIRGGLNGVDAGQTEAGLAQGFSASQVFLLIVFPQAYRKMLPAIISQF 146

Query: 332 LNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIALFMNR 387
           + ++K++SL  +V    +L      ++ +  QA ++  ++    FIY  ++ +I+    R
Sbjct: 147 VTVIKDTSLLYSVIAIQELFGKSQILMGKYFQAEQVFALYALITFIYFVINFIISSLSRR 206

Query: 388 LNAKIA 393
           L  K A
Sbjct: 207 LAKKWA 212


>gi|212716944|ref|ZP_03325072.1| hypothetical protein BIFCAT_01888 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660229|gb|EEB20804.1| hypothetical protein BIFCAT_01888 [Bifidobacterium catenulatum DSM
           16992]
          Length = 380

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 62/98 (63%), Gaps = 2/98 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F G    SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   
Sbjct: 134 FAFAG--LASPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLME 191

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +PQA+ +++P   +Q + +LK+++L   + + DL+ 
Sbjct: 192 IEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|269121061|ref|YP_003309238.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614939|gb|ACZ09307.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 239

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 57/85 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           FI    V  +F+   I     ++A+++EI+RSG+ ++ +GQMEAA ALG+ +  +   ++
Sbjct: 100 FILSGVVQSKFLIAVIGFGINSSAYVSEIIRSGIESLDKGQMEAARALGMPYSMSMFEII 159

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSL 340
           +PQA+R+I+P L ++++ L K +S+
Sbjct: 160 IPQAVRNILPALINEFIALFKETSV 184


>gi|51595218|ref|YP_069409.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|153949446|ref|YP_001402148.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|170025544|ref|YP_001722049.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894235|ref|YP_001871347.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|51588500|emb|CAH20108.1| putative amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|152960941|gb|ABS48402.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|169752078|gb|ACA69596.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697261|gb|ACC87890.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 217

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL+  +    V+ PQ
Sbjct: 79  GIDVSP-WTAAAMALTLFTSAFLVDIWCGSIAALPKGQWEASRCLGLSFHQTLFRVIAPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 138 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 185


>gi|237798794|ref|ZP_04587255.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331021647|gb|EGI01704.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 242

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 11/195 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHF 246
           K+ V S  L IVL L     +          +P   I T LI G+P LVL+ L  Y L  
Sbjct: 32  KLAVLSLALSIVLGLIGA--TAKLSSSALLRIPA-QIYTTLIRGVPDLVLMLLIFYSLQT 88

Query: 247 DKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +L    ++ +I    ++P F +  I L     A+  E  R  +++VPRGQ+EAA A 
Sbjct: 89  WLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGAYFTETFRGAILSVPRGQVEAATAY 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V+ PQ MR  +P + + +  LLK ++L   +G ADLV         T Q 
Sbjct: 145 GLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKASQDAGKSTYQL 204

Query: 364 IEIILIWMFIYLSLS 378
              +++   IYL ++
Sbjct: 205 FYFLILAALIYLMIT 219


>gi|158319771|ref|YP_001512278.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158139970|gb|ABW18282.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 266

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 73/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A+++EIVR G++++ +GQ EAA A+G+ H +    V+LPQ +R+I+P   ++
Sbjct: 106 IIVSINTGAYMSEIVRGGILSIDKGQFEAAEAIGMNHIQTMINVVLPQVIRNILPATGNE 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +   +L     +I   T +  E  LI   IYL+++I+I   +  +  
Sbjct: 166 FVINIKDTSVLNVISVTELFFQTKSISGATFKFFEPYLITSVIYLTMTIVITRILRYIER 225

Query: 391 KI 392
           ++
Sbjct: 226 RM 227


>gi|330836287|ref|YP_004410928.1| amino acid ABC transporter membrane protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329748190|gb|AEC01546.1| amino acid ABC transporter membrane protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 211

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 54/89 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F ++ IA +   AA+ AEI R G+ ++P+GQ EA   LG T  +    + +PQ ++ II
Sbjct: 81  RFTAVIIAFTVNYAAYFAEIYRGGIQSIPKGQHEATHVLGFTPWQTFTRITMPQVVKRII 140

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           P + ++ + L+K+++LA  +G A+L  V 
Sbjct: 141 PSMGNEVITLVKDTALAQTIGVAELFRVA 169


>gi|295697439|ref|YP_003590677.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295413041|gb|ADG07533.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 232

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 65/114 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L      +++E+ RS L+A+ +GQ+EA +ALG THR+A   +++PQ+    +P
Sbjct: 102 FAASVIGLGINYGCYLSEVFRSSLLAIDKGQIEACLALGYTHRQAMFHIVIPQSFLISLP 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           PL + +  +LK++SL   +   +++       +QT   IE   I   IYL +SI
Sbjct: 162 PLGNYFNAMLKDTSLCAFITLGEIILKTQAYASQTFLTIESYTIAAGIYLIVSI 215


>gi|167748156|ref|ZP_02420283.1| hypothetical protein ANACAC_02900 [Anaerostipes caccae DSM 14662]
 gi|317472312|ref|ZP_07931640.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes
           sp. 3_2_56FAA]
 gi|167652148|gb|EDR96277.1| hypothetical protein ANACAC_02900 [Anaerostipes caccae DSM 14662]
 gi|316900269|gb|EFV22255.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes
           sp. 3_2_56FAA]
          Length = 225

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 6/138 (4%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  EF+S+ +  + +  A + +IVR  + ++PR Q E+ ++LGLT  +  R +L+PQ
Sbjct: 86  GIHLEGEFISI-VVFTMWGTAEMGDIVRGAVTSMPRHQTESGLSLGLTKLQIYRYILVPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG-----GTIINQTGQAIEIILIWMFI 373
            +R ++P   +    ++K +SL V +G  +++ VG     G I+N     + +     F+
Sbjct: 145 TVRRVLPGAINLATRMVKTTSLVVIIGVVEVLKVGQQIIEGGILNTPAAPLWVYGFIFFL 204

Query: 374 YLSLSIMIALFMNRLNAK 391
           Y  L   I++   RL AK
Sbjct: 205 YFILCYPISIVAKRLEAK 222


>gi|121609114|ref|YP_996921.1| amino acid ABC transporter permease [Verminephrobacter eiseniae
           EF01-2]
 gi|121553754|gb|ABM57903.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Verminephrobacter eiseniae
           EF01-2]
          Length = 220

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 105/205 (51%), Gaps = 18/205 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F  + VLG++L++     +R   + T         + F+ F   T +LI + Y L +  P
Sbjct: 33  FAIALVLGLMLAIMRRSETRFIAKPT---------AFFIEFIRSTPLLIQV-YMLFYVAP 82

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           + G    I  S ++   + + +  +CY    ++E+ R+GL  V RGQ EAA AL L+  +
Sbjct: 83  LYG----ITMSALTAGTLGIAVHYACY----VSEVYRAGLNGVARGQWEAACALSLSPWR 134

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQA+R I+P L + ++ + K++ +  A+   +L+     I ++T + +E I +
Sbjct: 135 TYSGIILPQAIRPILPALGNYFVAMFKDTPVLSAITVVELMQQAKNIGSETFRFLEPITL 194

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
               +L +S+  A  + +L  ++ L
Sbjct: 195 AGLFFLLISVTCASCLRQLEHRVRL 219


>gi|167902770|ref|ZP_02489975.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei NCTC 13177]
          Length = 262

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204


>gi|229593272|ref|YP_002875391.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229365138|emb|CAY53377.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 216

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP +++  IAL+ +T+A++AEI R  + ++  GQ EA+ +L L   +  R V+LPQ
Sbjct: 80  GVDISP-WLAAAIALTLFTSAYLAEIWRGCVDSIAHGQWEASASLALNPLEQLRYVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   GG + N T
Sbjct: 139 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGGMLANAT 180


>gi|255659864|ref|ZP_05405273.1| polar amino acid uptake family ABC transporter, permease protein
           [Mitsuokella multacida DSM 20544]
 gi|260847943|gb|EEX67950.1| polar amino acid uptake family ABC transporter, permease protein
           [Mitsuokella multacida DSM 20544]
          Length = 235

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 9/208 (4%)

Query: 177 SFPTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFPTL    +  + V  FS ++GI+L      L            PLL I    + G P 
Sbjct: 13  SFPTLLGMVHITLLVTIFSAIVGILLGAAIAVLRIQCVPVIA---PLLRIFISFMRGTPF 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y   F  P +     I    V P    L +  + + AA+ AEI+RS ++AVP 
Sbjct: 70  LVQLFLAY---FGVPEILAHVGISMKGVPPLAFVLAV-FTLHMAAYGAEILRSSILAVPV 125

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G+ EAA++LG+T  +  R V+LPQA +  +P L +  + ++K +SL   VG  D++    
Sbjct: 126 GEKEAAMSLGMTSFQMYRRVVLPQAFQMAMPALINTVIGVVKGTSLIFNVGVVDIMRKAE 185

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +   + +++E+ +    IY  L  +IA
Sbjct: 186 LMAGNSQRSLELYVDVAVIYGILIFLIA 213


>gi|26991431|ref|NP_746856.1| amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|24986504|gb|AAN70320.1|AE016673_5 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 213

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 3/137 (2%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           ++SP F +  + L   TAA ++E+ R    A+P GQ EAA  L L+  +    V+LPQ +
Sbjct: 77  SLSP-FTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLSAPQRFFDVVLPQLV 135

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  IP   +  + LLK+S++A  +G  ++      +  QT Q + +      +YL LS+ 
Sbjct: 136 RIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSVYTAAAVVYLVLSVP 195

Query: 381 IALFMNRLNAKIALKEK 397
           +ALF   L+A   LK++
Sbjct: 196 VALFSRWLSAT--LKQR 210


>gi|330981546|gb|EGH79649.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 242

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 65  IYTTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216


>gi|163793473|ref|ZP_02187448.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
 gi|159181275|gb|EDP65790.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
          Length = 220

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 22/212 (10%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           TM+ +A + V   + G++  L        +  K  + L  LY+   ++ G+P LVLI   
Sbjct: 23  TMEISAIVIVIGLIAGMIGGLLLV-----YGPKPVRLLMRLYVD--VLRGIPVLVLILFS 75

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y   +   +LG         +S  + +  +AL+ + +A ++E  R  + ++P GQ EAA 
Sbjct: 76  Y---YGLALLG-------VNIS-AYTAGVVALAGFCSAHMSETFRGAIDSIPVGQTEAAK 124

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+GLT ++    VLLPQA R I+PP  +  + ++K ++L   +G  D++      I +  
Sbjct: 125 AIGLTFQQRFIYVLLPQAARRIVPPAINTAVEMVKGTTLLSIIGVLDVLLATQQTIARNY 184

Query: 362 QAIEIILIWMFIY----LSLSIMIALFMNRLN 389
             IE     M  Y     +LS M A F  R  
Sbjct: 185 MVIEFYATAMLFYFVLNFTLSRMGAYFERRFG 216


>gi|49081924|gb|AAT50362.1| PA2202 [synthetic construct]
          Length = 226

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 5/132 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ ++P GQ  AA ALGL   +  RLV+LPQA+  +
Sbjct: 94  PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVLRLVILPQALPVM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYL----SLS 378
           +P   +Q+++L+K++SLA  +G  +L  V   + N+      EI L    +Y     SL 
Sbjct: 154 LPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLFVALLYFLLCTSLD 213

Query: 379 IMIALFMNRLNA 390
           +  A    R  A
Sbjct: 214 LAAAFLARRRQA 225


>gi|307321919|ref|ZP_07601302.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti AK83]
 gi|306892432|gb|EFN23235.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti AK83]
          Length = 217

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 65/119 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS + + F +E+ R+G+ +VPRGQ EAA ALGL   K    ++ PQA++ I+P L + 
Sbjct: 93  LGLSIHYSTFFSEVYRAGIASVPRGQFEAADALGLHTTKKWMFIVGPQAIKPILPVLGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + + K + L  A+   +L      I  QT +  E  L+   I+L +S+  +  + +L 
Sbjct: 153 LVGMFKETPLLAAITVVELFGKAQNIAGQTYRYNEPYLMVALIFLIISVPCSFAIRKLE 211


>gi|300935047|ref|ZP_07150079.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300459710|gb|EFK23203.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 238

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLGITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|239624577|ref|ZP_04667608.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47_FAA]
 gi|239520963|gb|EEQ60829.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47FAA]
          Length = 219

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 112/215 (52%), Gaps = 21/215 (9%)

Query: 183 MDTNAKIF----VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           M T+ +IF    VFS  LG+V++    R+S++   K  +A+  +YIS  ++ G P ++ +
Sbjct: 17  MGTSIQIFMVTLVFSLPLGLVVAF--GRMSKN---KYLQAIVKVYIS--IMRGTPLMLQL 69

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            + Y         G +   G    S     + +I      AA+ AEI RSG+ ++P GQ 
Sbjct: 70  MVVY--------FGPYYLFGLKMGSGYRLWAAFIGFVINYAAYFAEIYRSGIQSMPVGQY 121

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA  LG +  +    ++LPQ ++ I+P +T++ + L+K++SLA  +  A++ S+   + 
Sbjct: 122 EAAQILGYSRFQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFTLSVAEMFSIAKGLA 181

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 I  +   +F Y+  ++++A+ M  +  K+
Sbjct: 182 ASQTNMIPFVAAGLFYYI-FNLVVAVGMEWVEKKL 215


>gi|218517085|ref|ZP_03513925.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 219

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 11/125 (8%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +I G P LVL+   Y  +    V        G  + P F +  +AL+ + ++ + EIV
Sbjct: 60  TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAIFCSSHVGEIV 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G
Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIG 168

Query: 346 FADLV 350
            A+L+
Sbjct: 169 VAELL 173


>gi|148826212|ref|YP_001290965.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittEE]
 gi|229846209|ref|ZP_04466321.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           7P49H1]
 gi|148716372|gb|ABQ98582.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittEE]
 gi|229811213|gb|EEP46930.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           7P49H1]
          Length = 221

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F     ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIQKLELRFTRFER 218


>gi|186476288|ref|YP_001857758.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184192747|gb|ACC70712.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 225

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 68/121 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E++R  + ++P+GQ EAA ++G+T  +A R  +LPQA R  +PPL++ 
Sbjct: 94  IGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTRAQALRRAILPQAARVALPPLSNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SLA  +   ++      I + T + + +      IYL  S +++    RL  
Sbjct: 154 FIALVKDTSLAAVLTVPEIFQAAQRIASVTYEPLILYTEAALIYLVFSSVLSSAQVRLER 213

Query: 391 K 391
           +
Sbjct: 214 R 214


>gi|22124842|ref|NP_668265.1| ABC transporter permease [Yersinia pestis KIM 10]
 gi|45440529|ref|NP_992068.1| putative amino acid ABC transporter permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108808737|ref|YP_652653.1| putative amino acid ABC transporter permease [Yersinia pestis
           Antiqua]
 gi|108811006|ref|YP_646773.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Nepal516]
 gi|145600150|ref|YP_001164226.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Pestoides F]
 gi|149364904|ref|ZP_01886939.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CA88-4125]
 gi|162420579|ref|YP_001607783.1| amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926615|ref|ZP_02222447.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165935981|ref|ZP_02224551.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166010969|ref|ZP_02231867.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166213024|ref|ZP_02239059.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399700|ref|ZP_02305224.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421515|ref|ZP_02313268.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423383|ref|ZP_02315136.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167468794|ref|ZP_02333498.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|218930280|ref|YP_002348155.1| putative amino acid ABC transporter permease [Yersinia pestis CO92]
 gi|229838866|ref|ZP_04459025.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229896359|ref|ZP_04511528.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Pestoides A]
 gi|229899435|ref|ZP_04514578.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229901225|ref|ZP_04516347.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Nepal516]
 gi|270489413|ref|ZP_06206487.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504971|ref|YP_003569033.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Z176003]
 gi|21957671|gb|AAM84516.1|AE013696_9 putative permease of ABC transporter [Yersinia pestis KIM 10]
 gi|45435386|gb|AAS60945.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|108774654|gb|ABG17173.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Nepal516]
 gi|108780650|gb|ABG14708.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Antiqua]
 gi|115348891|emb|CAL21848.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CO92]
 gi|145211846|gb|ABP41253.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Pestoides F]
 gi|149291317|gb|EDM41391.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CA88-4125]
 gi|162353394|gb|ABX87342.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Angola]
 gi|165916126|gb|EDR34733.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165921543|gb|EDR38740.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989969|gb|EDR42270.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166205811|gb|EDR50291.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960434|gb|EDR56455.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167052204|gb|EDR63612.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057553|gb|EDR67299.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|229681154|gb|EEO77248.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Nepal516]
 gi|229687837|gb|EEO79910.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229695232|gb|EEO85279.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700635|gb|EEO88665.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Pestoides A]
 gi|262363035|gb|ACY59756.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis D106004]
 gi|262366959|gb|ACY63516.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis D182038]
 gi|270337917|gb|EFA48694.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355430|gb|ADE65771.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Z176003]
 gi|320016444|gb|ADW00016.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 217

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL+  +    V+ PQ
Sbjct: 79  GIDVSP-WTAAAMALTLFTSAFLVDIWCGSIAALPKGQWEASRCLGLSFHQTLFRVIAPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 138 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 185


>gi|302541693|ref|ZP_07294035.1| glutamate transport system permease GluD [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302459311|gb|EFL22404.1| glutamate transport system permease GluD [Streptomyces
           himastatinicus ATCC 53653]
          Length = 286

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 3/122 (2%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L   L+ Y  + +AE+ R+G+ AV RGQ EAA +LGL   +    VL+PQ +R+++P +
Sbjct: 134 ALVTGLTLYNGSVLAEVFRAGVAAVDRGQREAAYSLGLRKTQVMTYVLVPQGVRAMLPAI 193

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALF 384
            SQ +  LK++SL   + + + +  G  I +     +  I + M I   Y+ + ++++  
Sbjct: 194 ISQLVVALKDTSLGFLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPVYIGMCMLLSWC 253

Query: 385 MN 386
            N
Sbjct: 254 AN 255



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT        + +  +G ++ AGRLS ++ V W+  + VE FR +P LV+IFF+
Sbjct: 64  LLRGLANTLKAFALAAVLSLALGAVLAAGRLSDHRPVRWLATLVVEFFRAMPVLVMIFFV 123

Query: 149 YKSVLSVLPIP 159
           + + L V P+P
Sbjct: 124 FVA-LKVQPLP 133


>gi|311114713|ref|YP_003985934.1| amino acid ABC transporter membrane protein [Gardnerella vaginalis
           ATCC 14019]
 gi|310946207|gb|ADP38911.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Gardnerella vaginalis ATCC 14019]
          Length = 231

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 106/216 (49%), Gaps = 29/216 (13%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R+    + +  K +PL  I  F++ G    V   LK   
Sbjct: 35  LFSTILGVILVMMRICPIHSLRIIASAYVEFFKNMPLTIIMVFMVLG----VYAQLK--- 87

Query: 245 HFDKPVLGQFNFIGGSTV-SPEFMSLYIA-LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                       +G STV S  F  L IA LS YTAAF+ E +RSGL  VP GQ EA  A
Sbjct: 88  ------------LGFSTVFSVNFFWLAIAGLSFYTAAFVCESLRSGLNTVPLGQAEACRA 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--VGGTIINQT 360
           LGL   ++   V+LPQ     + PL + ++ LLKNS++A A   A   S  +   I    
Sbjct: 136 LGLNFFQSAFNVILPQTFCGSVAPLGNTFIALLKNSTVAAAASVATETSTLMSEMIERHA 195

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              + I LI+   Y+ L I I +F   L+ K+A++ 
Sbjct: 196 DLIVPIFLIFACGYIVLIIPIGIFTTYLSNKLAVRR 231


>gi|209519717|ref|ZP_03268505.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209499861|gb|EDZ99928.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 218

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 59/101 (58%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR   ++VPRG  EA +ALG+   +    V+ P A+R + P L +Q++  LK
Sbjct: 100 SGAYIAEIVRGSFLSVPRGLKEAGLALGMPMWRVLGFVVGPVAIRRMTPALGNQFIVSLK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           ++SL + +G  +L   G  I+    +A+EI      IYL +
Sbjct: 160 DTSLFIVIGVGELTRQGQEIMAANFRAVEIWTAVAAIYLCM 200


>gi|150376685|ref|YP_001313281.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150031232|gb|ABR63348.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 219

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 70/129 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL+ + ++ + E+VR  L ++P+GQ EAA A+GLT  +    VL PQA+R  +P
Sbjct: 89  FQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTFAYVLGPQALRQALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G  +L+     +I++T  ++E      F+Y  ++  I  F 
Sbjct: 149 AWVNTAAEMVKASTLLSIIGVGELLLRTQEVISRTFMSLEFYFFAGFLYFVINYGIERFG 208

Query: 386 NRLNAKIAL 394
             +  K A+
Sbjct: 209 RYVERKTAV 217


>gi|319897354|ref|YP_004135550.1| arginine transporter subunit [Haemophilus influenzae F3031]
 gi|317432859|emb|CBY81224.1| arginine transporter subunit [Haemophilus influenzae F3031]
          Length = 221

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F     ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|302336263|ref|YP_003801470.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Olsenella uli DSM 7084]
 gi|301320103|gb|ADK68590.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Olsenella uli DSM 7084]
          Length = 280

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 66/118 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F  + + +    +  +AE+ R+G+ AVP+GQ EAA +LG+   K    ++ PQA+R +
Sbjct: 139 PSFWMITLPVGLAASGVLAEVFRAGVNAVPQGQSEAAYSLGMRRMKVMFKIVFPQAVRYV 198

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           IP L SQ + ++K++++A  V + D++     +I+     +    +   IY+ L+  I
Sbjct: 199 IPSLISQLVVVVKDTTVAYVVSYPDMLQNARVLISNYSALVSTYFVVAIIYILLNYAI 256



 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 19/75 (25%), Positives = 44/75 (58%), Gaps = 6/75 (8%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  ++ +  + A  +G ++  GR+S ++++  +CRV +  FR +P L++I+F +  
Sbjct: 71  GFLGTMEVSLTAGLIAIALGFVLMLGRVSGSRILGGLCRVVINFFRGVPSLLLIYFFF-- 128

Query: 152 VLSVLPIPDHSIVLP 166
               + +P + + +P
Sbjct: 129 ----MVVPQYGVRMP 139


>gi|257486647|ref|ZP_05640688.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289625251|ref|ZP_06458205.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289647248|ref|ZP_06478591.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298488754|ref|ZP_07006782.1| histidine ABC transporter, permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298156672|gb|EFH97764.1| histidine ABC transporter, permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320325646|gb|EFW81708.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320327071|gb|EFW83085.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330867262|gb|EGH01971.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330876918|gb|EGH11067.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889585|gb|EGH22246.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|331010125|gb|EGH90181.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 242

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 65  IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216


>gi|222082708|ref|YP_002542073.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727387|gb|ACM30476.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 221

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 11/125 (8%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T  I G P LVL+   Y       VL       G  + P F +   AL+ + ++ + EIV
Sbjct: 62  TDFIRGTPVLVLVLASYY------VLSTI----GIDLGP-FQAGVFALAIFCSSHVGEIV 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL A+P+GQ EAA A+GLT  +    VL PQA+R  +P   +    ++K S+L   +G
Sbjct: 111 RGGLQAIPKGQTEAAKAIGLTFGQTFAYVLWPQALRQFLPAWVNTAAEMVKASTLLSVIG 170

Query: 346 FADLV 350
            A+L+
Sbjct: 171 VAELL 175


>gi|186470876|ref|YP_001862194.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184197185|gb|ACC75148.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 220

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 70/119 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I LS  TAA+ ++I+ +G  ++ RGQ+EAA+   LT R+    + +PQ +R  
Sbjct: 88  PGIVAAAIGLSMNTAAYQSQILGAGFRSIARGQIEAAVTFNLTRRQVLWHIEVPQVVRVT 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +P L S+ ++++K S++   +   DL+ VG  + + T + +E+       YL+++ +++
Sbjct: 148 LPALVSEMIDIVKASAVVSVISVTDLMRVGQQLSSSTYRPLEVYTCAALFYLAITTLLS 206


>gi|330984857|gb|EGH82960.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 242

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 65  IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGAITLGFIYGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216


>gi|325523104|gb|EGD01507.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 257

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 70/119 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + LS    A+++E+ R+ + ++  GQ EA + +G+++    R V+LPQAM+  
Sbjct: 87  PGFWAGVLGLSLNLGAYLSEVFRAAIQSIDHGQREAGMTIGMSNAMIYRRVILPQAMKVA 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +P +   +++L+K+SSL   +   +L+  G  II +T  ++++ L+   IY ++S   A
Sbjct: 147 LPTVGGYFISLMKDSSLVSFIAVNELLRHGTIIIAETFMSMQVYLMVAIIYFAMSFAAA 205



 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP---PLVVI 145
           +L G   T  L+   M  A ++G  V  GRLS  + +AW  + YVE++R++P    L+VI
Sbjct: 16  LLKGAWITIELSLISMTGAILLGLAVAIGRLSPRRWIAWPLQCYVEIWRDVPLVVQLLVI 75

Query: 146 FFLYKSVLSVLP 157
           +F    +   LP
Sbjct: 76  YFTLPQIGLTLP 87


>gi|219855154|ref|YP_002472276.1| hypothetical protein CKR_1811 [Clostridium kluyveri NBRC 12016]
 gi|219568878|dbj|BAH06862.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 230

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 13/209 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I  FS V+ +V+ +  T  ++    K  + +  +YIS   + G P +V + L +     
Sbjct: 17  EILFFSVVIALVVGMILT-YAKVGKNKVVRCIASIYIS--FMRGTPMIVQLLLAF---IG 70

Query: 248 KPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            P++   +  G ST +    +   IA S   AAF AEI RS  + + +GQ+EA  ++G+T
Sbjct: 71  IPLI--LDSFGISTANWNNIIYAIIAFSLNEAAFFAEIFRSAYLDIDKGQIEAGQSIGMT 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQA 363
             +  R ++  Q     +P  T+  + L+KN+SL +A+G  DL+ +   I       GQ 
Sbjct: 129 KFQTFRRIIFVQVAAKALPNTTNMIIELMKNTSLGIAIGVTDLMGMAKQISYNNYGVGQT 188

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E  ++  FIY  + +++ +  + + A++
Sbjct: 189 -ETFIVAAFIYWIMGLILTIVSSNITARL 216


>gi|145635027|ref|ZP_01790733.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittAA]
 gi|260582108|ref|ZP_05849902.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus
           influenzae NT127]
 gi|319776578|ref|YP_004139066.1| arginine transporter subunit [Haemophilus influenzae F3047]
 gi|145267635|gb|EDK07633.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittAA]
 gi|260094740|gb|EEW78634.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus
           influenzae NT127]
 gi|317451169|emb|CBY87402.1| arginine transporter subunit [Haemophilus influenzae F3047]
          Length = 221

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F     ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|254500818|ref|ZP_05112969.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222436889|gb|EEE43568.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 237

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 68/124 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  +ALS   +++ +E   S    +P+GQ E   ALGL+  K  R ++LPQ +R  +P
Sbjct: 104 FVAGMVALSLVFSSYASEAFLSAFNGIPQGQYEGGYALGLSRYKTMRFIILPQLIRLALP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +L LLK +SL   +G ADLV   G     T +      + + IYL L+++ ++ +
Sbjct: 164 ALGNLWLILLKETSLVSVIGLADLVREAGIAARVTKEPFLFFGLVLVIYLLLTMISSVGL 223

Query: 386 NRLN 389
            R+ 
Sbjct: 224 LRIE 227


>gi|213970886|ref|ZP_03399009.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|213924409|gb|EEB57981.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 237

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 60  IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 116 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 176 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 211


>gi|210631313|ref|ZP_03296856.1| hypothetical protein COLSTE_00741 [Collinsella stercoris DSM 13279]
 gi|210160080|gb|EEA91051.1| hypothetical protein COLSTE_00741 [Collinsella stercoris DSM 13279]
          Length = 399

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 71/119 (59%), Gaps = 4/119 (3%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++ E++R G+ +V  GQ EAA +LGL+  +A R V+ PQ ++  IP L+++ +  +K
Sbjct: 264 STAYMMEVLRGGIESVDAGQTEAARSLGLSQWEAMRTVVFPQGVKFAIPGLSNELVINIK 323

Query: 337 NSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SS+   +G  DL+    +VGG    +   A+   +I++ + +  S ++  F NRLN K
Sbjct: 324 DSSVLSVIGTFDLMFATTTVGGIYYAKFEAALVTSVIYLCLTMFASWLLGRFANRLNVK 382


>gi|254179862|ref|ZP_04886461.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|184210402|gb|EDU07445.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
          Length = 246

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 94  PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIA 382
            P   +Q+++L+K++SLA  VG  +L  V   + N+      +I L    IYL L   + 
Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTALD 213

Query: 383 LFMNRLNAK 391
           +   RL A 
Sbjct: 214 VAATRLLAH 222


>gi|16264464|ref|NP_437256.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307306765|ref|ZP_07586506.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15140601|emb|CAC49116.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306902056|gb|EFN32654.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 219

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL+ + ++ + E+VR  L ++P+GQ EAA A+GLT  +    VL PQA+R  +P
Sbjct: 89  FQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTFTYVLGPQALRQALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G ++L+     +I++T  ++E      F+Y  ++  I  F 
Sbjct: 149 AWVNTAAEMVKASTLLSIIGVSELLLRTQELISRTFMSLEFYFFAGFLYFVINYGIERFG 208

Query: 386 NRLNAKIAL 394
             +  K A+
Sbjct: 209 RYVERKTAV 217


>gi|329910724|ref|ZP_08275365.1| amino acid ABC transporter, permease protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327546104|gb|EGF31167.1| amino acid ABC transporter, permease protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 198

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 61/108 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+ AE++R  L +VPRGQ+EAA+AL ++       ++LPQA+ + IPP T+ 
Sbjct: 68  LGLGLNIGAYGAEVMRGALSSVPRGQIEAAVALNISPFHRFFNIVLPQALANAIPPSTNL 127

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + LLK +SL   +  ADL      ++  T +  EI  I + IY  ++
Sbjct: 128 LIELLKGTSLVSLITLADLTFRANQLVEATFRTTEIFTIALVIYFVIA 175


>gi|307289497|ref|ZP_07569443.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306499515|gb|EFM68886.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|315164602|gb|EFU08619.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
          Length = 214

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 50/76 (65%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ A+P+GQ EAA  L LT  +    ++LPQ ++ ++P + ++ +NL+K+
Sbjct: 97  AAYFAEIFRGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 156

Query: 338 SSLAVAVGFADLVSVG 353
           +SL   +G  DL+  G
Sbjct: 157 TSLIYVLGLGDLLRAG 172


>gi|306829413|ref|ZP_07462603.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304428499|gb|EFM31589.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 213

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 23/214 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LI 238
           ++T+   A + +FS  LGI+++ FA ++    H K    L  LYI  +++ G P L+ LI
Sbjct: 16  SMTIQVFALVLIFSIPLGIIIA-FALQI----HWKPLHYLIDLYI--WVMRGTPLLLQLI 68

Query: 239 ALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            + Y L    P +G + + +  +          IA     AA+ AEI R G+  +P+GQ 
Sbjct: 69  FIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPKGQY 115

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T  
Sbjct: 116 EAAKVLKFSPVATVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASRTAA 175

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           N+    + + L    IYL +  ++ +   +L  K
Sbjct: 176 NRDANLVPMFLAGA-IYLIMIGLVTIVAKKLEKK 208


>gi|186473892|ref|YP_001861234.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196224|gb|ACC74188.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 240

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 12/199 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259
           A +LSR+   +T + L  LY + F   G+P L++I   Y  +F    L    GQ+    G
Sbjct: 45  AAKLSRY---RTARVLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEG 96

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P F+   +A+   + A+ AE+ RS ++AV +G++EAA ++G+      R +L+PQ 
Sbjct: 97  FVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSKGELEAARSIGMPTMTMARRILIPQV 156

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P + + +   LK+S+L    G A+L+         T Q     ++   +YL ++ 
Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRASQIAAGSTHQYFLFFVVGGALYLVMTG 216

Query: 380 MIALFMNRLNAKIALKEKK 398
           +     N   A++    ++
Sbjct: 217 ISNRVFNHAEARVGRSFRR 235


>gi|108799120|ref|YP_639317.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119868235|ref|YP_938187.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108769539|gb|ABG08261.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. MCS]
 gi|119694324|gb|ABL91397.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. KMS]
          Length = 292

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 72/118 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ Y  A IAEIVR+G+ A+PRGQ EAA ALGL   +  R +LLPQA+ S++P L SQ 
Sbjct: 146 GLTLYNGAVIAEIVRAGVKALPRGQAEAASALGLRWGQTQRSILLPQAVTSMLPVLVSQL 205

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +LK++++   + F ++V  G  + +  G  I  +++   + +S++  ++    +L 
Sbjct: 206 VVVLKDTAIGYQITFVEMVRQGTVVGSSYGNYIPALIVIAVLMISVNFALSALATKLE 263



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 19/128 (14%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNME-KSNLSLGIGFLSERAGFEIDQGIVPYTS 81
           R  NI + +I  L +T + +W V   Y+ ++ K  L+         A +E      P+ +
Sbjct: 15  RRRNIVITLI-TLAITALIVWVV---YSRLDAKGQLT--------AAKWE------PFLT 56

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            + + T +L G   T   A   ++ A I+G  +G GRLS    + W+C V VE FR +P 
Sbjct: 57  PNLWTTYVLPGVQGTLTAAAVSIVLALILGFGLGVGRLSVITPIRWVCAVIVEFFRAVPV 116

Query: 142 LVVIFFLY 149
           L+++ F Y
Sbjct: 117 LIMMIFAY 124


>gi|326329396|ref|ZP_08195720.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
 gi|325952722|gb|EGD44738.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
          Length = 284

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 73/120 (60%), Gaps = 8/120 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T L  G+P+++++ +        P LG    + G T S  +++ +  + CY  A++AE+ 
Sbjct: 120 TDLFRGVPSIMVVVI---CGIGIPALG----LSGVTSSLFWLTTFALVLCY-GAYVAEVF 171

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G++A+   Q+ +A AL LT  +  R V+LPQA+R ++PPL +  ++L K+++L  AVG
Sbjct: 172 RAGILAIHPTQVASAEALALTRAQTMRFVVLPQAVRRVVPPLMNDLVSLQKDTALISAVG 231


>gi|313500661|gb|ADR62027.1| Amino acid ABC transporter, permease protein [Pseudomonas putida
           BIRD-1]
          Length = 213

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 3/137 (2%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           ++SP F +  + L   TAA ++E+ R    A+P GQ EAA  L L+  +    V+LPQ +
Sbjct: 77  SLSP-FTAAVVGLGLITAAHMSEVYRGAFAAIPAGQFEAAYVLNLSAPQRFFDVVLPQLV 135

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  IP   +  + LLK+S++A  +G  ++      +  QT Q + +      +YL LS+ 
Sbjct: 136 RIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQVSQQTFQGLSVYSAAAVVYLVLSVP 195

Query: 381 IALFMNRLNAKIALKEK 397
           +ALF   L+A   LK++
Sbjct: 196 VALFSRWLSAT--LKQR 210


>gi|301630238|ref|XP_002944229.1| PREDICTED: glutamine transport ATP-binding protein glnQ-like
           [Xenopus (Silurana) tropicalis]
          Length = 444

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 18/206 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   + G+ L+L   R  R     TG      Y+   L+ G+P  V++ L Y   F   
Sbjct: 27  FIGGALTGLPLALARARGGRWLRVLTGA-----YVQ--LVQGIPLPVIMFLAY---FGIS 76

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           + G F+        P  ++  +A++ Y++A++ EI +  + AVP+ Q EAA  L LT  +
Sbjct: 77  IAG-FDL-------PSLVAAGLAMTAYSSAYLGEIWKGCIQAVPKTQWEAAACLALTPWQ 128

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+LPQA R  + P     + ++KNSS AV +GF DL      + N T     +  +
Sbjct: 129 RAVHVVLPQAARIAVAPTVGFLVQIVKNSSYAVVIGFFDLTYSARVVNNSTFAPFVVFSL 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
              +Y ++   ++    RL  ++  K
Sbjct: 189 AAVLYFAICYPLSTLSYRLEKRLVRK 214


>gi|237812178|ref|YP_002896629.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|254297702|ref|ZP_04965155.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|157806935|gb|EDO84105.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|237504085|gb|ACQ96403.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
          Length = 247

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA+R +
Sbjct: 94  PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|29375395|ref|NP_814549.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|255971263|ref|ZP_05421849.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|255973883|ref|ZP_05424469.1| ABC-type amino acid transport system [Enterococcus faecalis T2]
 gi|256617691|ref|ZP_05474537.1| ABC-type amino acid transport system [Enterococcus faecalis ATCC
           4200]
 gi|256761568|ref|ZP_05502148.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256854333|ref|ZP_05559697.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256957329|ref|ZP_05561500.1| ABC-type amino acid transport system [Enterococcus faecalis DS5]
 gi|256959935|ref|ZP_05564106.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|256964361|ref|ZP_05568532.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704]
 gi|257077675|ref|ZP_05572036.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|257081063|ref|ZP_05575424.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|257086160|ref|ZP_05580521.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|257089233|ref|ZP_05583594.1| ABC amino acid transporter permease [Enterococcus faecalis CH188]
 gi|257415374|ref|ZP_05592368.1| ABC-type amino acid transport system [Enterococcus faecalis
           AR01/DG]
 gi|257418408|ref|ZP_05595402.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|257421057|ref|ZP_05598047.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|29342855|gb|AAO80619.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|255962281|gb|EET94757.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|255966755|gb|EET97377.1| ABC-type amino acid transport system [Enterococcus faecalis T2]
 gi|256597218|gb|EEU16394.1| ABC-type amino acid transport system [Enterococcus faecalis ATCC
           4200]
 gi|256682819|gb|EEU22514.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256709893|gb|EEU24937.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256947825|gb|EEU64457.1| ABC-type amino acid transport system [Enterococcus faecalis DS5]
 gi|256950431|gb|EEU67063.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|256954857|gb|EEU71489.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704]
 gi|256985705|gb|EEU73007.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|256989093|gb|EEU76395.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|256994190|gb|EEU81492.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|256998045|gb|EEU84565.1| ABC amino acid transporter permease [Enterococcus faecalis CH188]
 gi|257157202|gb|EEU87162.1| ABC-type amino acid transport system [Enterococcus faecalis
           ARO1/DG]
 gi|257160236|gb|EEU90196.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|257162881|gb|EEU92841.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|295113979|emb|CBL32616.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Enterococcus sp. 7L76]
          Length = 213

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 50/76 (65%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ A+P+GQ EAA  L LT  +    ++LPQ ++ ++P + ++ +NL+K+
Sbjct: 96  AAYFAEIFRGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 155

Query: 338 SSLAVAVGFADLVSVG 353
           +SL   +G  DL+  G
Sbjct: 156 TSLIYVLGLGDLLRAG 171


>gi|303257952|ref|ZP_07343961.1| amino acid ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|331000077|ref|ZP_08323772.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
 gi|302859295|gb|EFL82377.1| amino acid ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|329572961|gb|EGG54581.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
          Length = 222

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 11/167 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++I G P LV +   Y + F  P +G         +   F++  I  S    A+ AE +R
Sbjct: 62  WVIRGTPLLVQL---YVVFFGLPSIG--------IMVDAFLAAVIVFSINEGAYNAETIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L +VP+GQMEA   +GL + +    V+LPQA R+  P L +  ++++K++SLA  +  
Sbjct: 111 GALESVPQGQMEAGRCVGLNYFQIMWHVVLPQAFRTAFPALGNSMISMVKDTSLAANITV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A++      I  +T + + + +    IYL  S ++     R   K+ 
Sbjct: 171 AEMFFQAQRIAGRTYETMAVYIEVALIYLIFSTILEYLQRRGEKKLG 217


>gi|224437529|ref|ZP_03658487.1| polar amino acid ABC transporter, inner membrane subunit
           [Helicobacter cinaedi CCUG 18818]
 gi|313143980|ref|ZP_07806173.1| polar amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129011|gb|EFR46628.1| polar amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 235

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 53/73 (72%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++EI+RSG++++ +GQ EAA ALGL+   + R ++ PQA+++ +P L ++++ LLK
Sbjct: 114 SGAYVSEIIRSGILSIDKGQDEAARALGLSSSLSMRYIIFPQALKNSLPTLGNEFIALLK 173

Query: 337 NSSLAVAVGFADL 349
            +S+A  +   DL
Sbjct: 174 ETSVANYITVHDL 186


>gi|163747480|ref|ZP_02154831.1| ABC transporter, membrane spanning protein (amino acid)
           [Oceanibulbus indolifex HEL-45]
 gi|161379236|gb|EDQ03654.1| ABC transporter, membrane spanning protein (amino acid)
           [Oceanibulbus indolifex HEL-45]
          Length = 217

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 1/138 (0%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F  I G  +SP F++  I L+ YT+A+  EIVR  + AVP     AA +LG+T  +    
Sbjct: 76  FQAIAGWGISP-FVTSCIVLALYTSAYCTEIVRGAIEAVPSVTRRAARSLGMTWGQDLTQ 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++ P A+R  +P      L ++K+S+L + +G  +L+     ++ +  + + I+L+   I
Sbjct: 135 IVFPMALRVGLPSWIGLTLGVMKDSALVMWLGIIELLRSSQILVTRLQEPMFILLVTGAI 194

Query: 374 YLSLSIMIALFMNRLNAK 391
           Y +LS  IA   +RL  +
Sbjct: 195 YFALSFPIARLGSRLEKR 212


>gi|317053311|ref|YP_004119078.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
 gi|316953050|gb|ADU72522.1| binding-protein-dependent transport systems inner membrane
           component [Pantoea sp. At-9b]
          Length = 232

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F  GI L+  A R S       G    LL++   LI G+P + +I   + + +  P L  
Sbjct: 43  FPGGIALACLAWRFS-------GVVRSLLFLWAELIRGIPLIFVI---FWMWYLLPALTG 92

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            +  G  TV+       +AL+ +T+A +     +GL A+P GQ  AA++ G +  K    
Sbjct: 93  SDMPGALTVA-------LALAWFTSASVMHSTLAGLQALPPGQHHAALSQGFSAGKLLWH 145

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--QTGQAIEIILIWM 371
           +LLPQ +R+I P L    +NL+K++SLA  +   +L ++ G + N  Q   A   +   +
Sbjct: 146 ILLPQTLRNIRPSLAGIGINLIKDTSLAFILNVPELTTLAGQVNNRVQVYPAALFVFTGL 205

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
             YL  + +  L   R N +I    K+
Sbjct: 206 VYYLLCTGLANLVQRRWNDQIRSCRKE 232


>gi|227517777|ref|ZP_03947826.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227554922|ref|ZP_03984969.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229546661|ref|ZP_04435386.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229548747|ref|ZP_04437472.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293383501|ref|ZP_06629412.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|293386673|ref|ZP_06631247.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294779832|ref|ZP_06745218.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300859984|ref|ZP_07106072.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307270135|ref|ZP_07551452.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307271415|ref|ZP_07552689.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307276212|ref|ZP_07557342.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307284361|ref|ZP_07564526.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|312901656|ref|ZP_07760926.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312905049|ref|ZP_07764174.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312907119|ref|ZP_07766112.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312951823|ref|ZP_07770714.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|312979302|ref|ZP_07791000.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|227074774|gb|EEI12737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227175948|gb|EEI56920.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229306140|gb|EEN72136.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229308228|gb|EEN74215.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|291079135|gb|EFE16499.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|291083890|gb|EFE20853.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294453106|gb|EFG21522.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300850802|gb|EFK78551.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306503301|gb|EFM72553.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306507124|gb|EFM76264.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511910|gb|EFM80906.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|306513504|gb|EFM82119.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310626896|gb|EFQ10179.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630226|gb|EFQ13509.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310631628|gb|EFQ14911.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311287896|gb|EFQ66452.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311291267|gb|EFQ69823.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315027598|gb|EFT39530.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315030507|gb|EFT42439.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315031301|gb|EFT43233.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315035305|gb|EFT47237.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315145197|gb|EFT89213.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315148312|gb|EFT92328.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315151625|gb|EFT95641.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315154250|gb|EFT98266.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315154877|gb|EFT98893.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315159961|gb|EFU03978.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315161884|gb|EFU05901.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315166987|gb|EFU11004.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315170860|gb|EFU14877.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315172709|gb|EFU16726.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315573427|gb|EFU85618.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315576571|gb|EFU88762.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|315581345|gb|EFU93536.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|323479998|gb|ADX79437.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           62]
 gi|327534392|gb|AEA93226.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
 gi|329577681|gb|EGG59109.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 214

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 50/76 (65%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ A+P+GQ EAA  L LT  +    ++LPQ ++ ++P + ++ +NL+K+
Sbjct: 97  AAYFAEIFRGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 156

Query: 338 SSLAVAVGFADLVSVG 353
           +SL   +G  DL+  G
Sbjct: 157 TSLIYVLGLGDLLRAG 172


>gi|330970980|gb|EGH71046.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 242

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 65  IYTTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216


>gi|291459981|ref|ZP_06599371.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417322|gb|EFE91041.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 223

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 20/185 (10%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS V  I+L++      R +  +   AL  LY+S F   G P +       QL +    L
Sbjct: 33  FSLVFAILLAII-----RQYRIRGLYALSSLYVSFFR--GTPFVA------QLFWFYYGL 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            Q  F     +SP F +L I +S   AAF++E +R+ L +V + Q EA +++G+   +  
Sbjct: 80  TQI-FDAIKVMSP-FTALVICMSANYAAFMSEDIRAALNSVSKAQYEAGLSIGMHPLQTV 137

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----GQAIEI 366
           + ++LPQA R   P L++ ++ + K++S+   +G+ D+++  G   ++      G  + I
Sbjct: 138 QRIILPQAARVAAPGLSNHFIGIFKSTSIGFMIGYKDMMAAVGLETSKAYRFLEGYTVSI 197

Query: 367 ILIWM 371
           I+ W+
Sbjct: 198 IVYWV 202


>gi|254473461|ref|ZP_05086858.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
 gi|211957577|gb|EEA92780.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
          Length = 236

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS   +++ +E   S   A+ +GQ E A ALGL +    RLV+LPQ +R  +P
Sbjct: 103 FIAGMIALSLVFSSYASEAFLSAFRAIKQGQYEGAAALGLGYAHTMRLVILPQLVRLALP 162

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +L LLK +SL   +G AD++         T +      +   IYL L+++ +  +
Sbjct: 163 ALSNLWLILLKETSLVSIIGLADIIRYSNMAARTTKEPFLFFSVACAIYLVLAVISSGGI 222

Query: 386 NRLNA 390
           +RL+A
Sbjct: 223 SRLDA 227


>gi|153215607|ref|ZP_01950052.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124114695|gb|EAY33515.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587]
          Length = 229

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  IALS   A++ ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R
Sbjct: 87  ISP-FISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P L +Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174


>gi|301383764|ref|ZP_07232182.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato Max13]
 gi|302059460|ref|ZP_07251001.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato K40]
 gi|302133660|ref|ZP_07259650.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|330966543|gb|EGH66803.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331015689|gb|EGH95745.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 242

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 65  IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216


>gi|257083726|ref|ZP_05578087.1| ABC-type amino acid transport system [Enterococcus faecalis Fly1]
 gi|256991756|gb|EEU79058.1| ABC-type amino acid transport system [Enterococcus faecalis Fly1]
          Length = 213

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 50/76 (65%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ A+P+GQ EAA  L LT  +    ++LPQ ++ ++P + ++ +NL+K+
Sbjct: 96  AAYFAEIFRGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 155

Query: 338 SSLAVAVGFADLVSVG 353
           +SL   +G  DL+  G
Sbjct: 156 TSLIYVLGLGDLLRAG 171


>gi|209552106|ref|YP_002284022.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539699|gb|ACI59630.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 220

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF AE  R+ +  +P    +AAIALGL  R     V++PQA R+ +P L +  +   + S
Sbjct: 103 AFNAEAYRASIQGIPPAHHDAAIALGLGKRVTAMYVIMPQAARNAMPVLVTNAIGAFQQS 162

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM---IALFMNRLN 389
           +L   VG ADL+  G  +  QT + IE       IYL +S++   IA F+ R N
Sbjct: 163 ALVALVGVADLMYQGKLLSTQTYRPIEAYTSVAIIYLVISVIFGQIAGFIERRN 216


>gi|145633092|ref|ZP_01788824.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           3655]
 gi|144986318|gb|EDJ92897.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           3655]
          Length = 221

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F     ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|317050659|ref|YP_004111775.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfurispirillum indicum S5]
 gi|316945743|gb|ADU65219.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfurispirillum indicum S5]
          Length = 260

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 70/119 (58%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ ++ A+I+EI+R+G+ ++ + Q+++A +LG T  +  R V++PQ +R I+PPL  Q+ 
Sbjct: 137 LALFSGAYISEIIRAGVESISQSQIDSARSLGFTPWQIYRHVIIPQVLRRILPPLAGQFA 196

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L+K+SSL   +  ++       +   T   +E  L     YL L++ ++L+   +  K
Sbjct: 197 SLIKDSSLLSIIAISEFTLNAQEVNAFTFSTLESYLPLALGYLILTLPVSLYSRHMERK 255


>gi|190891792|ref|YP_001978334.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190697071|gb|ACE91156.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 241

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 22/231 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TFLIFGL 232
           L+   +T+  +   F+   ++G V++    +LSRH        LP+ +++   T ++ G+
Sbjct: 23  LTAAAMTIGVSVCGFLTGTLIGTVITFM--QLSRH--------LPIRWLADCYTTVLRGV 72

Query: 233 PTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P L++I L Y      L     + G   FIG     P F++  +AL   +AA+ AE+ R 
Sbjct: 73  PDLLVIYLFYFGGSAFLGSLGGLFGYHGFIG----MPAFLTGTLALGVVSAAYQAEVFRG 128

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
              +V RG++EAA A+G+      R ++ P  +R  IP L + +  +LK S+L    G  
Sbjct: 129 AYRSVARGELEAASAVGMRPWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALISVTGLV 188

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+         T +  E  L  + +YL ++ + ++   R+ A+     ++
Sbjct: 189 ELLRQSQIAAGSTRRPFEFYLTAVVLYLVITWLSSILFRRMEARTIQGTRR 239



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 13/73 (17%)

Query: 90  LVGFVNTFW-------------LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           LVGF  T W             ++  G +  T+IGT++   +LS +  + W+   Y  V 
Sbjct: 10  LVGFEQTGWGWLLLTAAAMTIGVSVCGFLTGTLIGTVITFMQLSRHLPIRWLADCYTTVL 69

Query: 137 RNIPPLVVIFFLY 149
           R +P L+VI+  Y
Sbjct: 70  RGVPDLLVIYLFY 82


>gi|171320701|ref|ZP_02909715.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171094061|gb|EDT39157.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 244

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 2/117 (1%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +GG+ ++P F+   I +S +  AF AE +R+GL AVPR  +EAA +LG + R+    V L
Sbjct: 103 LGGNPLTP-FVWSVIVISLHKGAFHAEALRAGLEAVPRATLEAAQSLGYSRRQRLWHVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILIWMF 372
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q    +E+ ILI +F
Sbjct: 162 PLAVRFALPALVNNLVDLVKMTTVASAIAVGDVTYASIMIWTQRDNVLELMILILLF 218


>gi|325523118|gb|EGD01519.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 185

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 60/95 (63%), Gaps = 4/95 (4%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +GQF+F+  S + P     ++   IAL+  TA + AEI+R GL+AVP GQ+EA  ++GL+
Sbjct: 78  VGQFDFVRHSLLWPVLREPYLCAVIALALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
                R ++ P A+R  +P  T++ +  +K+++LA
Sbjct: 138 GFALLRRIIAPIALRQCLPAYTTEAILQVKSTALA 172


>gi|227820555|ref|YP_002824526.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339554|gb|ACP23773.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
          Length = 220

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 73/135 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I L  +   + AE+ R+G+  VPRGQ EAA A  LT R+    V+LPQA+  +
Sbjct: 86  PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L +  + + K + L  A+   +L++   +I N   + IE + +    +L +S++  +
Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLVMSLISVI 205

Query: 384 FMNRLNAKIALKEKK 398
           F+  L  + A  +++
Sbjct: 206 FLRWLEERYARVDER 220


>gi|150375847|ref|YP_001312443.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Sinorhizobium
           medicae WSM419]
 gi|150030394|gb|ABR62510.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Sinorhizobium medicae WSM419]
          Length = 220

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 73/135 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I L  +   + AE+ R+G+  VPRGQ EAA A  LT R+    V+LPQA+  +
Sbjct: 86  PALVAGVIGLGIHYGTYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L +  + + K + L  A+   +L++   +I N   + IE + +    +L +S++  +
Sbjct: 146 IPALANYLIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVV 205

Query: 384 FMNRLNAKIALKEKK 398
           F+  L  + +  E++
Sbjct: 206 FLRWLEERYSRVEQR 220


>gi|319778835|ref|YP_004129748.1| Histidine ABC transporter, permease protein HisQ [Taylorella
           equigenitalis MCE9]
 gi|317108859|gb|ADU91605.1| Histidine ABC transporter, permease protein HisQ [Taylorella
           equigenitalis MCE9]
          Length = 228

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 8/125 (6%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF  E  R   +AVP+GQ EA+IA GL+  +    ++ PQ MR  +P + + +L +LK 
Sbjct: 105 GAFFGETFRGAFLAVPKGQYEASIAYGLSQHRTMWHIMFPQMMRYALPGVGNNWLIVLKA 164

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF----IYLSLSIMIALFMNRLNAKIA 393
           ++L   +G  DLV V      + G+A + + +++F    IYL L+ +  +F+  L  + +
Sbjct: 165 TALVSILGLQDLVLV----TQEAGRATQKMFLFIFVAGVIYLLLTTISNIFLYWLERRYS 220

Query: 394 LKEKK 398
              K+
Sbjct: 221 AGIKE 225


>gi|239983306|ref|ZP_04705830.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 290

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 42/221 (19%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI 238
           T+   A   V S VLG VL++   RLS H         P+ +++T ++     +P LV+I
Sbjct: 76  TLKAFAYASVLSLVLGGVLAV--GRLSDH--------RPVRWVATVIVEFFRAMPVLVMI 125

Query: 239 -----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                AL+ Q                        +L   L+ Y  + +AE+ RSG+ +V 
Sbjct: 126 FFVFVALQVQ---------------------ALPALVTGLTLYNGSVLAEVFRSGVNSVD 164

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA ALG+   +    VL PQA+R+++P + SQ +  LK++SL   + + + +  G
Sbjct: 165 KGQREAAYALGMRKTQVMVQVLAPQALRAMLPAIISQLVVALKDTSLGYLITYEEFLHAG 224

Query: 354 GTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNRLNAK 391
             I +     +  I + M    IY+ + ++++ F   ++ +
Sbjct: 225 KLIASNLDYDLPFIPVVMVISPIYIGMCMLLSWFAQWVSRR 265



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 29/41 (70%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++G ++  GRLS ++ V W+  V VE FR +P LV+IFF++
Sbjct: 89  VLGGVLAVGRLSDHRPVRWVATVIVEFFRAMPVLVMIFFVF 129


>gi|256830363|ref|YP_003159091.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256579539|gb|ACU90675.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 249

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 23/196 (11%)

Query: 220 PLLYI----STF--LIFGLPTLVLIALKYQLHFDK--PVLGQFN---------------F 256
           P LY+    ST+  L   LP LVLI L Y    D+  P +G  +                
Sbjct: 48  PSLYLRLVGSTYVELCRNLPPLVLIFLCYFFLADQIAPTIGLQDALRTAPDTVKAVAGVL 107

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           IG       F++    L  Y  A++AEIVR G+ +V  GQ EA  A G         +++
Sbjct: 108 IGRLDQVDAFVTAAFTLGLYEGAYVAEIVRGGIRSVDAGQWEAGRAQGFPRFGLMVFIIM 167

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R++IPPL  Q ++ +K+S++   +   +L   G  ++  T   +E+      +Y  
Sbjct: 168 PQAVRNMIPPLAGQIISTIKDSAIVSVISIQELTFQGMQLMATTYLTMEVWTCVALLYFV 227

Query: 377 LSIMIALFMNRLNAKI 392
           L+   ++   RL  ++
Sbjct: 228 LTFSCSMGAARLEHRL 243


>gi|294791035|ref|ZP_06756193.1| glutamate transport system permease protein GluD [Scardovia
           inopinata F0304]
 gi|294458932|gb|EFG27285.1| glutamate transport system permease protein GluD [Scardovia
           inopinata F0304]
          Length = 443

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 60/88 (68%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  + ++ I+L  Y  + +AE+VRSG+ ++P GQ EAA+ALGLT  ++  L+ +PQA+ +
Sbjct: 147 SSSYWAVTISLILYNGSVVAELVRSGVGSLPDGQREAALALGLTRTRSLMLIEVPQALYA 206

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P   +Q + +LK+++L   + + DL+
Sbjct: 207 MLPAAITQLVVVLKDTALGSIILYTDLL 234


>gi|154502490|ref|ZP_02039550.1| hypothetical protein RUMGNA_00303 [Ruminococcus gnavus ATCC 29149]
 gi|153796886|gb|EDN79306.1| hypothetical protein RUMGNA_00303 [Ruminococcus gnavus ATCC 29149]
          Length = 215

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 68/112 (60%), Gaps = 5/112 (4%)

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F    L Q N IGG  ++    ++ +  S   AA+ AEI RSG+ ++P+GQ EAA  LG
Sbjct: 70  YFAPYYLWQMN-IGGYKLT----AILLGCSLNYAAYFAEIYRSGIESIPKGQYEAATLLG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            +  +    ++LPQ +++++P +T++ + L+K++SL  ++ + ++ +V   I
Sbjct: 125 YSRGQTFFRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAKQI 176


>gi|66047102|ref|YP_236943.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|289676779|ref|ZP_06497669.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
 gi|302188857|ref|ZP_07265530.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|63257809|gb|AAY38905.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330898593|gb|EGH30012.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330949982|gb|EGH50242.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 242

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 65  IYTTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216


>gi|15800617|ref|NP_286631.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 EDL933]
 gi|15830199|ref|NP_308972.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750051|ref|ZP_02775073.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4113]
 gi|168756661|ref|ZP_02781668.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4401]
 gi|168763283|ref|ZP_02788290.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767377|ref|ZP_02792384.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4486]
 gi|168776408|ref|ZP_02801415.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4196]
 gi|168779419|ref|ZP_02804426.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787088|ref|ZP_02812095.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC869]
 gi|168799851|ref|ZP_02824858.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC508]
 gi|195936911|ref|ZP_03082293.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. EC4024]
 gi|208805959|ref|ZP_03248296.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815342|ref|ZP_03256521.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822579|ref|ZP_03262898.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398007|ref|YP_002269535.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4115]
 gi|217326489|ref|ZP_03442573.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. TW14588]
 gi|254792061|ref|YP_003076898.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. TW14359]
 gi|261225516|ref|ZP_05939797.1| arginine transporter subunit; membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258515|ref|ZP_05951048.1| arginine transporter subunit; membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK966]
 gi|291281864|ref|YP_003498682.1| Arginine ABC transporter permease protein ArtQ [Escherichia coli
           O55:H7 str. CB9615]
 gi|12513883|gb|AAG55241.1|AE005267_6 arginine 3rd transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13360404|dbj|BAB34368.1| arginine 3rd transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187768204|gb|EDU32048.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4196]
 gi|188015744|gb|EDU53866.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4113]
 gi|189002709|gb|EDU71695.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4076]
 gi|189356305|gb|EDU74724.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363468|gb|EDU81887.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4486]
 gi|189366539|gb|EDU84955.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4501]
 gi|189372987|gb|EDU91403.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC869]
 gi|189377763|gb|EDU96179.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC508]
 gi|208725760|gb|EDZ75361.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208731990|gb|EDZ80678.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738064|gb|EDZ85747.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209159407|gb|ACI36840.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4115]
 gi|209775308|gb|ACI85966.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775310|gb|ACI85967.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775312|gb|ACI85968.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775314|gb|ACI85969.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775316|gb|ACI85970.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|217322710|gb|EEC31134.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. TW14588]
 gi|254591461|gb|ACT70822.1| arginine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|290761737|gb|ADD55698.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O55:H7 str. CB9615]
 gi|320192653|gb|EFW67294.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC1212]
 gi|320637732|gb|EFX07524.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. G5101]
 gi|320642855|gb|EFX12056.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H- str. 493-89]
 gi|320648312|gb|EFX16967.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H- str. H 2687]
 gi|320654150|gb|EFX22218.1| arginine transporter permease subunit ArtQ [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320659774|gb|EFX27330.1| arginine transporter permease subunit ArtQ [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320664244|gb|EFX31395.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. LSU-61]
 gi|326338244|gb|EGD62073.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. 1125]
 gi|326346221|gb|EGD69959.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. 1044]
          Length = 238

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 98/187 (52%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L ++  + ++    + PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGIVEIPVQMQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|170734488|ref|YP_001766435.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169817730|gb|ACA92313.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 226

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 14/149 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G++L+ F T L+R F  +  +A+   YI  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLLLA-FGTALTRLFGPRWAQAVVRFYI--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T  +A R
Sbjct: 84  --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
             +LPQA R  +P L++ +++L+K++SLA
Sbjct: 136 RAILPQAARVALPALSNSFISLVKDTSLA 164


>gi|19553157|ref|NP_601159.1| glutamate ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62390792|ref|YP_226194.1| glutamate permease [Corynebacterium glutamicum ATCC 13032]
 gi|22002045|sp|P48244|GLUC_CORGL RecName: Full=Glutamate transport system permease protein gluC
 gi|21324722|dbj|BAB99345.1| ABC-type transporter, permease components (glutamate)
           [Corynebacterium glutamicum ATCC 13032]
 gi|41326130|emb|CAF20293.1| GLUTAMATE PERMEASE [Corynebacterium glutamicum ATCC 13032]
          Length = 228

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 3/123 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+ F+AE +RSG+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +  + L 
Sbjct: 107 YTSTFVAESLRSGINTVHFGQAEAARSLGLGFGATFRSIIFPQAVRAAIVPLGNTLIALT 166

Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           KN+++A  + VG A L+ +  TI N       +  I+   ++ L++ + L + +L+ ++A
Sbjct: 167 KNTTIASVIGVGEASLL-MKATIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLSERLA 225

Query: 394 LKE 396
           +K+
Sbjct: 226 VKK 228


>gi|315650944|ref|ZP_07903984.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315486790|gb|EFU77132.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 216

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 67/115 (58%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++  GQ EAA  LG T  +   +++LPQ ++ I+P +T++ + L+K+
Sbjct: 99  AAYFAEIYRSGIQSMSGGQYEAAKILGYTKSQTFFVIILPQVIKRILPSVTNEVITLVKD 158

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +  A++ ++   + + T      +   +F Y+  + ++A  M  +  K+
Sbjct: 159 TSLAFTISVAEMFTMAKALASSTTSMYPFVCAALFYYI-FNAIVAFVMEFIEKKL 212


>gi|323526411|ref|YP_004228564.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383413|gb|ADX55504.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 218

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 65/116 (56%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEIVR   ++VPRG  EA +ALG+   +    V+ P A+R + P L +Q++  LK
Sbjct: 100 SGAYIAEIVRGSFLSVPRGLKEAGLALGMPAWRVLAFVVGPVAIRRMTPALGNQFIVSLK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL + +G  +L   G  I+    +A+EI      +YL +   +   + R+  ++
Sbjct: 160 DTSLFIVIGVGELTRQGQEIMASNFRAVEIWTAVAALYLCMIGTLTYCLRRMERRM 215


>gi|262403804|ref|ZP_06080362.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC586]
 gi|262350308|gb|EEY99443.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC586]
          Length = 229

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  IALS   A++ ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R
Sbjct: 87  ISP-FISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGIPPSHAFIRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P L +Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174


>gi|218886665|ref|YP_002435986.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757619|gb|ACL08518.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 226

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 77/127 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L   +AA+ ++I R  ++A+P+GQ+ AA ALG++   A R ++LPQA+R  IP
Sbjct: 89  FTASCLVLGMTSAAYQSQIFRGAILALPQGQLRAARALGMSDGTAIRSIVLPQALRLSIP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             +++Y  LLK+S+LA  +G  ++++    + ++T + + + +    +Y  ++++    +
Sbjct: 149 GWSNEYSILLKDSALAFVLGTPEIMARTHFVASRTYEHLPLYMTAGALYFVITLIGLKVL 208

Query: 386 NRLNAKI 392
            RL  K+
Sbjct: 209 RRLEHKL 215


>gi|167589673|ref|ZP_02382061.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 228

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 24/139 (17%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP L        +H D                 E+ +  +A++    A+  EIVR
Sbjct: 78  FIFFGLPAL-------GVHID-----------------EYTAAILAMTLNLGAYSVEIVR 113

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP G +EAA AL ++  +  R V+LPQA+  + P L+SQ +  +  S++   +  
Sbjct: 114 AGVAAVPNGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISV 173

Query: 347 ADLVSVGGTIINQTGQAIE 365
           ADL    G I ++  +A E
Sbjct: 174 ADLTYAAGYIQSRNFRAFE 192


>gi|326317639|ref|YP_004235311.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323374475|gb|ADX46744.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 272

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 28/194 (14%)

Query: 186 NAKIFVFSFVLGIVLSL----------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           N +I V +  LG  + L           A R++   H +  +  P+L +  F  +  P  
Sbjct: 68  NIEISVLAVALGTAVGLVVGALSLSPVHAVRVAARCHVQVFRNAPILVLIYFTTYVFP-- 125

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                 +++H    V   F F       P+++ + + L+  T+A +AEI R  + ++P  
Sbjct: 126 ------FEVHL---VQWTFPF-------PDWVKVVLGLALPTSANVAEIFRGAIQSIPAA 169

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +L     +  RLV+LPQ +R ++PP  + Y ++  ++SLA  VG  D+V     
Sbjct: 170 QWEAAQSLAFRRSQIFRLVVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQI 229

Query: 356 IINQTGQAIEIILI 369
             N   +    IL+
Sbjct: 230 ASNTVARTDFTILV 243


>gi|168218287|ref|ZP_02643912.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens NCTC 8239]
 gi|182379709|gb|EDT77188.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens NCTC 8239]
          Length = 213

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA +   AA+  EI RSG+  + RGQ EA+  LGL+     + ++LPQ+ +  +
Sbjct: 83  RFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTL 142

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + ++ + L+K++SL   VG  +L+  G    N+    + +  I +   L ++++  +F
Sbjct: 143 PSIANEVITLVKDTSLVYVVGIGELLRAGKIASNRDASLLPLFSIGIIYLLLIAVLTKIF 202

Query: 385 MNRLNAK 391
            +RL  K
Sbjct: 203 -DRLEKK 208


>gi|147678666|ref|YP_001212881.1| ABC-type amino acid transport/signal transduction system
           [Pelotomaculum thermopropionicum SI]
 gi|146274763|dbj|BAF60512.1| ABC-type amino acid transport/signal transduction system
           [Pelotomaculum thermopropionicum SI]
          Length = 762

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 66/113 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA      A+++E+ R+G+ +V RGQ EA IA+G T  K    ++LPQA R+I+P    +
Sbjct: 629 IAFGMNFGAYVSEMFRTGIESVDRGQTEAGIAMGFTRVKTFLYIVLPQAARNILPVYKGE 688

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +++L+K +S+   +   DL   G  I ++T  A   +++   +Y  +S +++L
Sbjct: 689 FISLVKMTSVVGYIAVQDLTKAGDIIRSRTFDAFFPLVMVAVLYFFISWLLSL 741


>gi|71737589|ref|YP_273644.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558142|gb|AAZ37353.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 237

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 60  IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++
Sbjct: 116 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATA 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 176 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 211


>gi|307320839|ref|ZP_07600249.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306893549|gb|EFN24325.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 219

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL+ + ++ + E+VR  L ++P+GQ EAA A+GLT  +    VL PQA+R  +P
Sbjct: 89  FQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLTFAQTFTYVLGPQALRQALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +    ++K S+L   +G ++L+     +I++T  ++E      F+Y  ++  I  F 
Sbjct: 149 AWVNTAAEMVKASTLLSIIGVSELLLRTQELISRTFMSLEFYFFAGFLYFVINYGIERFG 208

Query: 386 NRLNAKIAL 394
             +  K A+
Sbjct: 209 RYVERKTAV 217


>gi|184154545|ref|YP_001842885.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|183225889|dbj|BAG26405.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
          Length = 418

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 23/177 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P++ ++ F+  G+P+++                      G  + P F +  + L   
Sbjct: 265 RGMPMIVLAFFIYIGMPSVI----------------------GHKI-PLFTAGILTLMLD 301

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++  IV+ G  AV RGQ EAA +LGL + K    V++PQ ++ ++P L +Q +  LK
Sbjct: 302 EGAYVGAIVKGGFQAVDRGQWEAARSLGLPYYKTLVKVIMPQGIKIMVPSLVNQLIITLK 361

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++S+  A+G  +L   G  II +  +  +I LI   IY+ +  ++    N +  K+A
Sbjct: 362 DTSILSAIGVMELTQTGTVIIARNMEGFKIWLIIGVIYIIIITLLTWLSNYVQRKMA 418


>gi|297199925|ref|ZP_06917322.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
 gi|197710393|gb|EDY54427.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
          Length = 231

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 62/122 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +EIVR  L AV   Q E  IAL  T  +  RL+LLPQA+  +IPP ++ 
Sbjct: 88  LALGLTYGAYGSEIVRGALGAVDPAQQEGGIALSFTPWQRMRLILLPQAVPEMIPPFSNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL   G  +     ++  I    + IY  ++ ++   M  L  
Sbjct: 148 LIELLKGTALVSVMGMGDLAFSGNLVRLALQESAGIYTYLLLIYFVIAFLLTRLMRGLEK 207

Query: 391 KI 392
           K+
Sbjct: 208 KL 209


>gi|119025600|ref|YP_909445.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154487062|ref|ZP_02028469.1| hypothetical protein BIFADO_00900 [Bifidobacterium adolescentis
           L2-32]
 gi|118765184|dbj|BAF39363.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154084925|gb|EDN83970.1| hypothetical protein BIFADO_00900 [Bifidobacterium adolescentis
           L2-32]
          Length = 375

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLLQIEVPQAIYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|50086542|ref|YP_048052.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           ADP1]
 gi|49532516|emb|CAG70230.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 221

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 8/135 (5%)

Query: 233 PTLVLIALKYQLHFD-KPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIV 285
           P L  +A+ Y   F   P+L Q    F G    G  +SP + +   +L+ Y AA+ AEI 
Sbjct: 49  PILQKVAIVYIEFFQGTPLLIQLFMTFFGLSLLGIDISP-WTAAAFSLTAYAAAYFAEIW 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + ++P GQ EAA +L +T  +  R V+LPQA+R  I P     + ++K +++   +G
Sbjct: 108 RGCVQSIPVGQWEAAASLAMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSIIG 167

Query: 346 FADLVSVGGTIINQT 360
           F +L   G  + N T
Sbjct: 168 FTELTKTGSVLANAT 182


>gi|154246381|ref|YP_001417339.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154160466|gb|ABS67682.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 219

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 59/105 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  +++S Y + ++ EI R  + AVP+ Q E+  +L LT  +    ++LPQA+R  
Sbjct: 85  PAIVAAGLSMSIYASGYLGEIWRGCIQAVPKPQWESGESLALTIPQQYLYIILPQAIRIS 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +PP     + L+KN+S+A  +GF +L   G  I N T Q   + L
Sbjct: 145 LPPTVGFLVQLVKNTSIAALIGFVELTRAGQLINNATFQPFRVFL 189


>gi|322373222|ref|ZP_08047758.1| ABC-type amino acid transport system permease component
           [Streptococcus sp. C150]
 gi|321278264|gb|EFX55333.1| ABC-type amino acid transport system permease component
           [Streptococcus sp. C150]
          Length = 228

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 1/125 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V+P + + +I  S  T   ++EI+RS L+ V +GQ+EAA A+GLT R+A   ++ PQA++
Sbjct: 96  VNPLYYA-FIIYSLMTTGSLSEIIRSALLTVDKGQLEAAQAIGLTTRQAYLRIVFPQALK 154

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           + +P L +  +N++K +SL   +   D+ ++         Q  E   +   +YL +  +I
Sbjct: 155 AALPNLCNLVINIVKGTSLVFVMTIKDITAIARVEAAYGYQYFESYFVIFILYLIICGII 214

Query: 382 ALFMN 386
            +  N
Sbjct: 215 QVLFN 219


>gi|302339795|ref|YP_003805001.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636980|gb|ADK82407.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 213

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 1/103 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           I G ++SP F++  +       A+  EI R G+ ++  GQ EAA AL + + +  R ++L
Sbjct: 76  IFGISLSP-FLAASLTFVLNYGAYFMEIFRGGIESIDSGQYEAAKALNMNYWQTMRRIIL 134

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           PQA+R ++PP T++ + L+K+++L V +G  +L+     I  +
Sbjct: 135 PQAVRVVLPPTTNEAITLVKDTALVVVIGMGELLRSAKEIFTR 177


>gi|293365295|ref|ZP_06612012.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|291316745|gb|EFE57181.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
          Length = 210

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 29/217 (13%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236
           ++T+   A + +FS  LGIV++ FA ++            PL Y+    I+   G P L+
Sbjct: 13  SMTLQVFALVLIFSIPLGIVVA-FALQVRWE---------PLHYLIDLYIWVMRGTPLLL 62

Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            LI + Y L    P +G + + +  +          IA     AA+ AEI R G+  +P+
Sbjct: 63  QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 109

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    
Sbjct: 110 GQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 169

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  N+    + + L    IYL +  ++ +   RL  K
Sbjct: 170 TAANRDASLVPMFLAGA-IYLIMIGLVTIVAKRLEKK 205


>gi|239616534|ref|YP_002939856.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505365|gb|ACR78852.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
          Length = 224

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 21/202 (10%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RGL    +T++      V  F++GI+L+L     +R +     K +  + I   +I G P
Sbjct: 18  RGLG---VTLEMTLISVVAGFLIGILLAL-----ARVYGNALLKGIATVIIE--VIRGTP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +   + L++  P  G        +++P   +L I  S  + A+ AE +RS + ++ 
Sbjct: 68  LLVQL---FILYYGLPPYG-------VSLTPLTAAL-IGFSINSGAYQAEYLRSAINSIQ 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             QM AA +LG+T  +A   ++LPQA+R +IP   ++++ LLK +SLA  VG  +L++  
Sbjct: 117 HTQMLAARSLGMTKWQAIFNIILPQALRRVIPAWANEFIYLLKYTSLAYIVGAPELMAKA 176

Query: 354 GTIINQTGQAIEIILIWMFIYL 375
             I ++  Q  E+ L+   IYL
Sbjct: 177 KFIASRNFQFFEVYLVVALIYL 198


>gi|169833411|ref|YP_001694086.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168995913|gb|ACA36525.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 219

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSDQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|78065759|ref|YP_368528.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77966504|gb|ABB07884.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 229

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 6/189 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269
           H +  +A+   Y  T LI  +P LVL+ L +  +  +  L QF +F+G   +  + F++ 
Sbjct: 42  HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDFVGWDQIDIDPFVAG 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L     A+  E  R   ++VPRGQ+EA  A G++  +    ++ PQ MR  +P + +
Sbjct: 98  VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGN 157

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  L+K ++L   +G AD+V         T      IL+   IYL+++ +  L + +L 
Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217

Query: 390 AKIALKEKK 398
            + ++  + 
Sbjct: 218 KRYSMGVRH 226


>gi|306823260|ref|ZP_07456636.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Bifidobacterium dentium ATCC 27679]
 gi|309801915|ref|ZP_07696030.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|304553892|gb|EFM41803.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Bifidobacterium dentium ATCC 27679]
 gi|308221471|gb|EFO77768.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 377

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLMQIEVPQAIYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|257790888|ref|YP_003181494.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|257474785|gb|ACV55105.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
          Length = 566

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 51/70 (72%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+  Y   +I+E+VRSG+ ++ RGQ EAA + G ++ ++  +++LPQA+R I+PPL  Q
Sbjct: 98  LAIGIYHGGYISEVVRSGIGSIHRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQ 157

Query: 331 YLNLLKNSSL 340
             NL+KN+S+
Sbjct: 158 AANLVKNTSV 167


>gi|23501836|ref|NP_697963.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|161618909|ref|YP_001592796.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|163843221|ref|YP_001627625.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|254701712|ref|ZP_05163540.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 5 str. 513]
 gi|254704254|ref|ZP_05166082.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|254719050|ref|ZP_05180861.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           sp. 83/13]
 gi|256061052|ref|ZP_05451208.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           neotomae 5K33]
 gi|256369378|ref|YP_003106886.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260566497|ref|ZP_05836967.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261325053|ref|ZP_05964250.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261752263|ref|ZP_05995972.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261754922|ref|ZP_05998631.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|265984042|ref|ZP_06096777.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|297248902|ref|ZP_06932616.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|306838981|ref|ZP_07471803.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|306840464|ref|ZP_07473223.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306843854|ref|ZP_07476449.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|23347772|gb|AAN29878.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|161335720|gb|ABX62025.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|163673944|gb|ABY38055.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
 gi|255999538|gb|ACU47937.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260156015|gb|EEW91095.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261301033|gb|EEY04530.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261742016|gb|EEY29942.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261744675|gb|EEY32601.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|264662634|gb|EEZ32895.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|297174266|gb|EFH33617.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|306275609|gb|EFM57333.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306289479|gb|EFM60697.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306405948|gb|EFM62205.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 240

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  +AL    +++ +E+  S   A+P GQ E   A+GL+ R+  R+V+ PQ +R  +P
Sbjct: 104 FVAGMVALGFVFSSYSSEVFLSAFRAIPHGQYEGGYAVGLSRRQTMRMVIFPQLIRIALP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +L LLK++SL   +  +D++         T +      I   +YL+L+I+ + F+
Sbjct: 164 GLANLWLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLALAIISSYFI 223

Query: 386 NRL 388
           NR+
Sbjct: 224 NRI 226


>gi|114567254|ref|YP_754408.1| amino acid ABC transporter permease [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114338189|gb|ABI69037.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 195

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 66/128 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S   +A+ AEI R+ + A  +GQ+EAA ALG +       V LPQAM  I+P    +
Sbjct: 50  VGFSLNFSAYAAEIFRTAIDATDKGQLEAAYALGFSQYAGFFKVTLPQAMLHILPIYKGE 109

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K +S+   +   DL  +   I ++T  A   +    FIY  L+ +    M R+  
Sbjct: 110 FVSMVKMTSVVGYIAIQDLTKMSDIIRSRTFDAFFPLFATAFIYFVLTYLFIYLMGRVEI 169

Query: 391 KIALKEKK 398
           +I  K +K
Sbjct: 170 QIDPKRRK 177


>gi|307132298|ref|YP_003884314.1| putative amino acid ABC transporter permease [Dickeya dadantii
           3937]
 gi|306529827|gb|ADM99757.1| Putative amino acid ABC transporter, permease protein [Dickeya
           dadantii 3937]
          Length = 218

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA   LGL+  +    V+ PQ
Sbjct: 80  GIDVSP-WTAAALALTLFTSAFLLDIWHGSVQALPKGQWEACRCLGLSFTQTLTRVIAPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTFQPFKV 186


>gi|260770437|ref|ZP_05879370.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii CIP 102972]
 gi|260615775|gb|EEX40961.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii CIP 102972]
 gi|315181508|gb|ADT88421.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii NCTC 11218]
          Length = 216

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 5/160 (3%)

Query: 237 LIALKYQLHFDKPVLGQF--NFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIA 291
           +I L  +L    P+L Q    F G S V  E   + +  ++L+ +++AF  +I R  + +
Sbjct: 52  VIKLYVELFQGTPLLMQLFLAFFGLSLVGVEVSAWTAAVLSLTLFSSAFFHDIWRGCIES 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EA   LGL++ +  R ++ PQA R  I P     + ++K ++LA  +GF +L  
Sbjct: 112 LPKGQWEACRTLGLSYLQTMRYIIAPQAARLAIAPTVGFSVQIVKGTALASIIGFVELTK 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  + N T Q  ++  +   +Y ++   ++     L  +
Sbjct: 172 AGTMLNNATFQPFKVFALVALLYFAICFPLSALARYLETR 211


>gi|188534745|ref|YP_001908542.1| Putative amino acid ABC transporter, permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188029787|emb|CAO97666.1| Putative amino acid ABC transporter, permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 221

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 59/102 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LGLT R+    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRRQTFMRVVLPPALKRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V + +L      I ++T  + E+ L+   +YL+LSI
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLMYLALSI 203


>gi|209543096|ref|YP_002275325.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530773|gb|ACI50710.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 219

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP F S++I ++   AA++A+IV +GL  VP    +AA +LGLT R+A   V+ P 
Sbjct: 83  GVMVSP-FASVFIGMALNAAAYLADIVTTGLGRVPPLYHDAAASLGLTRRQAYMRVIFPH 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++++ P L + +  ++  SS+A   G  DL      + + T + +E++L+   +Y  LS
Sbjct: 142 ALQTMAPALANHFQIMILGSSMASIFGVEDLTGRAYDVGSTTFRILEVMLVAGVLYALLS 201

Query: 379 IMI 381
           + +
Sbjct: 202 VAL 204


>gi|295130174|ref|YP_003580837.1| hypothetical protein HMPREF0675_3666 [Propionibacterium acnes
           SK137]
 gi|291376703|gb|ADE00558.1| conserved hypothetical protein [Propionibacterium acnes SK137]
          Length = 182

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 1/127 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +    V     +  I L     A++AEI  SGL +V  GQ EAA ALG+      R
Sbjct: 7   QFASVETEKVVTALAAAIIGLGLNEGAYLAEITGSGLESVDVGQTEAAKALGMKPSLIVR 66

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
             ++PQAMR IIPP  ++ + +LK +SL +A+ F  DL      I N T   I ++++  
Sbjct: 67  RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126

Query: 372 FIYLSLS 378
             YL ++
Sbjct: 127 CWYLVMT 133


>gi|229829990|ref|ZP_04456059.1| hypothetical protein GCWU000342_02096 [Shuttleworthia satelles DSM
           14600]
 gi|229791288|gb|EEP27402.1| hypothetical protein GCWU000342_02096 [Shuttleworthia satelles DSM
           14600]
          Length = 216

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 63/105 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI RSG+ ++P GQ EAA  LG +  +    ++LPQ ++ I+P +T++
Sbjct: 92  IAFALNYAAYFAEIYRSGIESMPAGQYEAARVLGYSGSQTFFKIILPQVIKRILPSVTNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            + L+K++SLA ++ +A++ +    +       + +I   +F Y+
Sbjct: 152 VITLVKDTSLAFSIAYAEMFTQAKALAASAHNVLPLIAAGIFYYV 196


>gi|229593009|ref|YP_002875128.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229364875|emb|CAY52939.1| putative amino acid BAC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 239

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 8/127 (6%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IA S   AAF +EI  S L  +P+GQ+EAA  LGL+     R V+LPQ  R  +P
Sbjct: 104 FVAAMIAFSLVFAAFSSEIWLSALKTLPKGQLEAAAMLGLSKGTTFRRVVLPQLTRIALP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +L+LLK++SL   +   DL       + QT  A+ +    M  Y +++ +  LF 
Sbjct: 164 GLSNNWLSLLKDTSLVSTISLVDL-------MRQTSLAVSVTKEPMLFY-TVACLGYLFF 215

Query: 386 NRLNAKI 392
           + L+ ++
Sbjct: 216 SALSGRV 222


>gi|227514192|ref|ZP_03944241.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087455|gb|EEI22767.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 484

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 23/177 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P++ ++ F+  G+P+++                      G  + P F +  + L   
Sbjct: 331 RGMPMIVLAFFIYIGMPSVI----------------------GHKI-PLFTAGILTLMLD 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++  IV+ G  AV RGQ EAA +LGL + K    V++PQ ++ ++P L +Q +  LK
Sbjct: 368 EGAYVGAIVKGGFQAVDRGQWEAARSLGLPYYKTLVKVIMPQGIKIMVPSLVNQLIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++S+  A+G  +L   G  II +  +  +I LI   IY+ +  ++    N +  K+A
Sbjct: 428 DTSILSAIGVMELTQTGTVIIARNMEGFKIWLIIGVIYIIIITLLTWLSNYVQRKMA 484


>gi|330902473|gb|EGH33506.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 192

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 70  SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 129

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 130 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 169


>gi|328885477|emb|CCA58716.1| putative glutamate transport protein [Streptomyces venezuelae ATCC
           10712]
          Length = 224

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  YT  F+ E +RSG+  VP GQ EAA ALGL   +   LV+LPQA R+ + PL + 
Sbjct: 98  LGLIAYTGTFVCEALRSGINTVPPGQAEAARALGLNFVQVLTLVVLPQAFRAAVAPLANV 157

Query: 331 YLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + L KN+++ A        V +   I N+T     +  ++ F ++ L++   LF+    
Sbjct: 158 LIALTKNTTVAAAIGAAEAAVLMKEMIENETDALFAVFAVFAFGFIVLTLPTGLFLGWAA 217

Query: 390 AKIALKE 396
            ++A+K 
Sbjct: 218 KRLAVKR 224


>gi|307331404|ref|ZP_07610523.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces violaceusniger Tu 4113]
 gi|306882963|gb|EFN14030.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces violaceusniger Tu 4113]
          Length = 249

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +EIVR  + +V   Q EAAIAL  T  +  R V+LPQA+  +IPP  + 
Sbjct: 89  LALGLTYGAYGSEIVRGAIASVAPAQREAAIALSFTPAQRMRRVILPQAIPEMIPPFNNL 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L  AV  AD+          TG ++EI  I + +Y  L+ ++   M  L  
Sbjct: 149 LIELLKATALVSAVSVADITFAAQLSRLATGDSLEIYAIILVLYFVLAFVLTRLMRLLER 208

Query: 391 K 391
           +
Sbjct: 209 R 209


>gi|239835031|ref|ZP_04683359.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239823094|gb|EEQ94663.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 220

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 11/162 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P LV      QL +   VL +F  I  S +    + L IA S Y A    E  R+
Sbjct: 61  VIRGIPILV------QLFYIYFVLPEFG-IALSALQAGIIGLGIAYSAYQA----ENFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+  GQ EAA ++G+      R V+LPQA+R I+PP  +  + LLK+SS A A+  A
Sbjct: 110 GIEAIDHGQTEAAQSIGMGWFMTMRRVILPQAVRVILPPYGNIMVMLLKDSSQASAITVA 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +L   G  +   T + + +  +    YL LS+ + + + RL 
Sbjct: 170 ELTLQGQLLAASTFKNMSVYTLVAMFYLCLSLPLMMAVGRLE 211


>gi|257056920|ref|YP_003134752.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586792|gb|ACU97925.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 223

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+SP    + I L  + A + AE+ R+G+ AVP+GQ EAA AL L   +    V+LPQ
Sbjct: 84  GITLSPMVTGV-IGLGLHYATYTAEVYRAGIEAVPKGQWEAATALSLPRTRTWTAVILPQ 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A+  ++P L +  +++ K + L +A+G  D+V 
Sbjct: 143 AITRVLPALGNYTISMFKETPLLLAIGVLDIVG 175


>gi|291457471|ref|ZP_06596861.1| glutamate transport system permease protein GluC [Bifidobacterium
           breve DSM 20213]
 gi|291381306|gb|EFE88824.1| glutamate transport system permease protein GluC [Bifidobacterium
           breve DSM 20213]
          Length = 225

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 72/154 (46%), Gaps = 25/154 (16%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +       + R     + +  K LPL  I  F++ G             
Sbjct: 29  LFSMILGVILVVMRISPISSLRTVAGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EAA AL
Sbjct: 76  -----AYAQLKLSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPLGQAEAARAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           GL   ++   ++LPQA R  + PL +  + LLKN
Sbjct: 131 GLGFMQSATEIILPQAFRGSVAPLGNTLIALLKN 164


>gi|157146481|ref|YP_001453800.1| arginine transporter permease subunit ArtQ [Citrobacter koseri ATCC
           BAA-895]
 gi|157083686|gb|ABV13364.1| hypothetical protein CKO_02241 [Citrobacter koseri ATCC BAA-895]
          Length = 238

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 18/222 (8%)

Query: 191 VFSFVLGIVLSL-FATRLSRHFH--EKTGKA-------LPLLYISTFLIFGLPTLVLI-- 238
           V + ++G+VL++ FA   S  +     TG A       LP + +  F+ FG   L+L+  
Sbjct: 19  VCALIIGLVLAMIFAVWESVKWRPIAWTGSAVVTILRGLPEILVVLFIYFGSSQLLLMLS 78

Query: 239 -ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L F + P+  Q   I    VSP F+   IALS   AA+ ++ +R  L AVP GQ
Sbjct: 79  DGFTINLGFVQIPLQMQ---IEDFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVPSGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 195 ATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLRATRFERR 236


>gi|134291670|ref|YP_001115439.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134134859|gb|ABO59184.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 216

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 69/128 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++    L+ +T+A++AEI R  + AVP+GQ EA+ +L +++ +  R V+LPQA R  
Sbjct: 84  PPWVAATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIA 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + P     +  +K+++L   +GF +L   G  I N T +   +  +   IY +L   +  
Sbjct: 144 VAPTVGFGVQAVKDTALVSIIGFTELTKAGIAISNATFRPFVVYGLVALIYFALCYPLTR 203

Query: 384 FMNRLNAK 391
           +   L  +
Sbjct: 204 YARTLQRR 211


>gi|307246527|ref|ZP_07528599.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306852590|gb|EFM84823.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 238

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 19/173 (10%)

Query: 193 SFVLGIVLS-----LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           SF++G+ ++     +  T ++   H +   A+  +YIS  +I G P LV I++ +   + 
Sbjct: 42  SFIIGMAIAVGVALIRVTPVNGMLH-RIALAIVKVYIS--IIRGTPMLVQISVVF---YG 95

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G +       + P   +  I  S    A+ +E VR+ + +VP+GQ EA   + +T+
Sbjct: 96  LPAIGVY-------IDP-IPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTICMTY 147

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +  R ++ PQA+R +IPPL++ ++ L K++SLA  V   ++  V   + N +
Sbjct: 148 MQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMS 200


>gi|124486253|ref|YP_001030869.1| hypothetical protein Mlab_1437 [Methanocorpusculum labreanum Z]
 gi|124363794|gb|ABN07602.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanocorpusculum labreanum Z]
          Length = 228

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 7/135 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F      L   +AA+ ++I R  + ++  GQM AA +LG+T  +A R ++LPQ++R  
Sbjct: 87  PVFGVAVTVLGLRSAAYQSQIFRGAIQSLSEGQMLAARSLGMTKWQAIRSIILPQSLRLS 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P  +++Y  LL +S++A  +G A+L++    +I++TG+        M +YL+ +++  L
Sbjct: 147 LPGWSNEYPVLLTDSAVAYVIGVAELLTRTSQVISRTGEP-------MLLYLTCAVIFIL 199

Query: 384 FMNRLNAKIALKEKK 398
                   I   EKK
Sbjct: 200 LNYGGMMIIQYIEKK 214


>gi|315612722|ref|ZP_07887633.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315314832|gb|EFU62873.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 219

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSTQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|312142892|ref|YP_003994338.1| polar amino acid ABC transporter, inner membrane subunit
           [Halanaerobium sp. 'sapolanicus']
 gi|311903543|gb|ADQ13984.1| polar amino acid ABC transporter, inner membrane subunit
           [Halanaerobium sp. 'sapolanicus']
          Length = 229

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 75/135 (55%), Gaps = 7/135 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + +   ++A+ ++I R  + +V   Q++AA++LG+    A   ++ PQA+R  
Sbjct: 86  PVFRAAVLGIGLRSSAYQSQIYRGAIQSVSGSQLKAAMSLGMNKLTAFSHIIAPQAIRIA 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPP+T++   +LK++SLA  +G  +LV  G   I  + +        M IYL+++ +  +
Sbjct: 146 IPPVTNESAIVLKDTSLAFTIGVVELVRQGDYFIATSNEP-------MVIYLTVAAIYFI 198

Query: 384 FMNRLNAKIALKEKK 398
               +N  ++L EKK
Sbjct: 199 LTTTINLALSLFEKK 213


>gi|119946457|ref|YP_944137.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865061|gb|ABM04538.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 246

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 270 YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           YI +S Y A          A++AE  R   +AV +GQ+EAA A G+   K    V+ PQ 
Sbjct: 109 YINISPYIAGIITIGFIFGAYMAETFRGAFLAVEKGQLEAATAYGMNKYKLFLRVMFPQM 168

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           MR  +P + + +L LLK ++L   +G  D+V + G     T Q     +    ++L  + 
Sbjct: 169 MRHALPGIGNNWLVLLKTTALVSVIGLQDMVKIAGDAGGSTQQPFTFYIAIALVFLFFTS 228

Query: 380 MIALFMNRLNAKIALKEK 397
           + +L  +    K  +K +
Sbjct: 229 VSSLLFSWAERKYTIKTR 246


>gi|91781327|ref|YP_556534.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693987|gb|ABE37184.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 227

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 13/170 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G P LV +   + L F  P++G    +GG       ++  + L   + A+ 
Sbjct: 56  LYIS--FMRGTPALVQL---FMLFFTLPLIG----LGGR----PMLAAALTLGLNSGAYT 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R  L  V  GQ +AAIALG++  +    + LPQ +++ +P L +++  LLK + LA
Sbjct: 103 AEILRGNLRVVTTGQYDAAIALGMSPSRIALRIALPQMLKASLPALINEFTILLKTTPLA 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   +L   G  +I +T  + +++L+    YL++++ +     R+  K
Sbjct: 163 SVVAVTELTYAGQIVIARTYTSTQVMLLVSVGYLAVALPVIYAARRMQRK 212


>gi|227546750|ref|ZP_03976799.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227212712|gb|EEI80593.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 225

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +             G      K LPL  I  F++ G             
Sbjct: 29  LFSLILGVILVVMRISPISSLRAVAGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EAA AL
Sbjct: 76  -----AYAQLKLSFSDTFTTNFFWLAVTGLSLYTAAFVCESLRSGINTVPIGQAEAARAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTG 361
           GL   ++   ++LPQA R  + PL +  + LLKN +  A A    +  S+   +I  +  
Sbjct: 131 GLGFMQSATEIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEFRPD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             I+I LI+   Y+ L I I +    L+ K+A++ 
Sbjct: 191 VIIQIFLIFALGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|218283496|ref|ZP_03489486.1| hypothetical protein EUBIFOR_02076 [Eubacterium biforme DSM 3989]
 gi|218215764|gb|EEC89302.1| hypothetical protein EUBIFOR_02076 [Eubacterium biforme DSM 3989]
          Length = 218

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S  T A+ AE +R  + +VP+GQMEA   +G+++ +    ++LPQA RS  P L + 
Sbjct: 90  IVFSLNTGAYCAETIRGSIESVPQGQMEAGYCVGMSYMQIMMHIILPQAFRSAFPSLFNN 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SLA  +   ++      I  +T Q +++ +   F+YL       +F   L  
Sbjct: 150 LISLVKDTSLAANITVTEMFMQTERIAGRTYQFMQLYIEVAFVYL-------IFCTVLTW 202

Query: 391 KIALKEKK 398
             A  EKK
Sbjct: 203 LQAWGEKK 210


>gi|171743315|ref|ZP_02919122.1| hypothetical protein BIFDEN_02446 [Bifidobacterium dentium ATCC
           27678]
 gi|283455712|ref|YP_003360276.1| glutamate transport system permease gluD [Bifidobacterium dentium
           Bd1]
 gi|171278929|gb|EDT46590.1| hypothetical protein BIFDEN_02446 [Bifidobacterium dentium ATCC
           27678]
 gi|283102346|gb|ADB09452.1| Glutamate transport system permease protein GluD [Bifidobacterium
           dentium Bd1]
          Length = 377

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLALGLTRTQSLMQIEVPQAIYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|153815715|ref|ZP_01968383.1| hypothetical protein RUMTOR_01953 [Ruminococcus torques ATCC 27756]
 gi|317501901|ref|ZP_07960085.1| amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088284|ref|ZP_08337203.1| hypothetical protein HMPREF1025_00786 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846956|gb|EDK23874.1| hypothetical protein RUMTOR_01953 [Ruminococcus torques ATCC 27756]
 gi|316896581|gb|EFV18668.1| amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330408528|gb|EGG87994.1| hypothetical protein HMPREF1025_00786 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 236

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 53/73 (72%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+RSG+ +V  GQMEA  A+GL+   +   +++PQA+++I+P L ++++ L+K
Sbjct: 114 SGAYISEIMRSGIQSVDAGQMEAGRAVGLSFGASMMKIVIPQAVKNILPTLGNEFIALIK 173

Query: 337 NSSLAVAVGFADL 349
            +S+   VG ADL
Sbjct: 174 ETSVVSFVGAADL 186



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLV 125
           ++D+ I  +   + Y   ++ G  NT  +A  G++   +IGT++   R+        +++
Sbjct: 7   KVDKFIEIFIDQNGY-VKVVQGLQNTVLIAIVGLVIGILIGTVIATARVLPKYKVLPRVL 65

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             IC VYV +FR  P +V +   Y  +L ++
Sbjct: 66  NGICSVYVAMFRGTPMVVQLLVFYYVLLPII 96


>gi|315635186|ref|ZP_07890464.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315476148|gb|EFU66902.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 240

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 110/220 (50%), Gaps = 27/220 (12%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL------YISTFLIFGLPTLV 236
           +D    + V SF  G+ ++L    +     EK    + LL      Y+ST  I G P LV
Sbjct: 34  IDKTIPLAVISFFAGVAIALIVALI--RIVEKPNLGMRLLQILCRIYVST--IRGTPMLV 89

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I   + + +  P +G         + P F +  IA S    A+ +E +R+ ++++P+GQ
Sbjct: 90  QI---FIIFYGLPEVG-------IKLDP-FPTAIIAFSINIGAYASETIRAAILSIPKGQ 138

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA+ ++G+ + +     ++ QA+R  +PPL + +++ +K++SLA  V   ++  V   I
Sbjct: 139 WEASYSIGMNYYQTFTRTIMTQALRVSVPPLANTFISNVKDTSLASLVLVTEMFRVAQNI 198

Query: 357 INQTGQAIEIILIW---MFIYLSLSIMIALFMNRLNAKIA 393
              T +  E I+I+     IY  + ++++   +RL  +++
Sbjct: 199 ---TAENYEFIMIYSEAALIYWCICLILSFAQDRLEQRLS 235


>gi|307703835|ref|ZP_07640776.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|307622670|gb|EFO01666.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 213

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 29/217 (13%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236
           ++T+   A + +FS  LGIV++ FA ++            PL Y+    I+   G P L+
Sbjct: 16  SMTLQVFALVLIFSIPLGIVVA-FALQVRWE---------PLHYLIDLYIWVMRGTPLLL 65

Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            LI + Y L    P +G + + +  +          IA     AA+ AEI R G+  +P+
Sbjct: 66  QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    
Sbjct: 113 GQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  N+    + + L    IYL +  ++ +   RL  K
Sbjct: 173 TAANRDASLVPMFLAGA-IYLIMIGLVTIVAKRLEKK 208


>gi|291455132|ref|ZP_06594522.1| glutamate transporter permease [Streptomyces albus J1074]
 gi|291358081|gb|EFE84983.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 412

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 42/212 (19%)

Query: 188 KIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLVLI---- 238
           K F ++ VL +VL   L   RLS H         P+ +++T ++     +P LV+I    
Sbjct: 200 KAFAYASVLSLVLGGVLAVGRLSDH--------RPVRWVATVIVEFFRAMPVLVMIFFVF 251

Query: 239 -ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            AL+ Q                        +L   L+ Y  + +AE+ RSG+ +V +GQ 
Sbjct: 252 VALQVQ---------------------ALPALVTGLTLYNGSVLAEVFRSGVNSVDKGQR 290

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALG+   +    VL PQA+R+++P + SQ +  LK++SL   + + + +  G  I 
Sbjct: 291 EAAYALGMRKTQVMVQVLAPQALRAMLPAIISQLVVALKDTSLGYLITYEEFLHAGKLIA 350

Query: 358 NQTGQA---IEIILIWMFIYLSLSIMIALFMN 386
           +        I ++++   IY+ + ++++ F  
Sbjct: 351 SNLDYDLPFIPVVMVISPIYIGMCMLLSWFAQ 382



 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT        + + ++G ++  GRLS ++ V W+  V VE FR +P LV+IFF+
Sbjct: 191 LLRGLGNTLKAFAYASVLSLVLGGVLAVGRLSDHRPVRWVATVIVEFFRAMPVLVMIFFV 250

Query: 149 Y 149
           +
Sbjct: 251 F 251


>gi|225374846|ref|ZP_03752067.1| hypothetical protein ROSEINA2194_00469 [Roseburia inulinivorans DSM
           16841]
 gi|225213307|gb|EEG95661.1| hypothetical protein ROSEINA2194_00469 [Roseburia inulinivorans DSM
           16841]
          Length = 216

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G+ ++P GQ EAA  LG    +    ++LPQ ++ I+P +T++
Sbjct: 92  IAFAINYAAYFAEIYRGGIESMPVGQYEAAKVLGYGKTQTFVKIILPQVIKRILPSVTNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SLA ++ +A++ S    +       I  +   +F Y+  + ++A  M     
Sbjct: 152 VITLVKDTSLAFSIAYAEMFSQAKALAASQKSMIPFVAAAIFYYV-FNYVVAFIMEFFEK 210

Query: 391 KIA 393
           K++
Sbjct: 211 KMS 213


>gi|186472703|ref|YP_001860045.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia phymatum STM815]
 gi|184195035|gb|ACC72999.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia phymatum STM815]
          Length = 219

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 70/124 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++ + A + +E+ R+GL  V RGQ EAA AL L+  +    V+LPQA+R +IP L + 
Sbjct: 95  IGIALHYACYTSEVYRAGLNGVARGQWEAACALSLSPWRTYSGVILPQAVRPVIPALGNY 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K++ +  A+   +L+     + ++T + +E I +    +L +SI  A  + RL  
Sbjct: 155 LVAMFKDTPVLSAITVVELMQQAKNVGSETFRYLEPITLAGLFFLVISITFAQLVRRLEF 214

Query: 391 KIAL 394
           ++ L
Sbjct: 215 RLRL 218


>gi|299782729|gb|ADJ40727.1| Glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum CECT 5716]
          Length = 484

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 23/177 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P++ ++ F+  G+P+++                      G  + P F +  + L   
Sbjct: 331 RGMPMIVLAFFIYIGMPSVI----------------------GHKI-PLFTAGILTLMLD 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++  IV+ G  AV RGQ EAA +LGL + K    V++PQ ++ ++P L +Q +  LK
Sbjct: 368 EGAYVGAIVKGGFQAVDRGQWEAARSLGLPYYKTLVKVIMPQGIKIMVPSLVNQLIITLK 427

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++S+  A+G  +L   G  II +  +  +I LI   IY+ +  ++    N +  K+A
Sbjct: 428 DTSILSAIGVMELTQTGTVIIARNMEGFKIWLIIGVIYIIIITLLTWLSNYVQRKMA 484


>gi|295836793|ref|ZP_06823726.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB74]
 gi|197697533|gb|EDY44466.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB74]
          Length = 213

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 73/134 (54%), Gaps = 1/134 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           STV P  + + + L  + + +++E  R+G+ AVP+GQ EAA AL L+  +  R V+LPQA
Sbjct: 80  STVDPLTIGI-VVLGVHYSTYMSEAYRAGIDAVPKGQWEAARALSLSPGRTWRAVILPQA 138

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R+++P L +  + + K + L  A+   ++V       ++     E+  +   I+L  S 
Sbjct: 139 VRNVLPALGNYAIAMFKETPLLAAITVGEMVYEAREYASEHFVYAEVFTLAGLIFLVASY 198

Query: 380 MIALFMNRLNAKIA 393
             +L M +L  ++ 
Sbjct: 199 PTSLLMRKLENRLG 212


>gi|169837461|ref|ZP_02870649.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [candidate division TM7
           single-cell isolate TM7a]
          Length = 417

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 77/132 (58%), Gaps = 1/132 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +SP   +L+I +S  T A+++EI+R G+ ++  GQ EAA A+G+T+ +  + ++ PQ  
Sbjct: 270 NLSPLIAALFI-VSINTGAYMSEIIRGGIDSIDTGQFEAAKAIGMTNFQLMKSIIFPQMF 328

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P + ++ +  +K++S+   +   +L  +  ++     +  E+ +I   IY  L+  
Sbjct: 329 RNILPMIGNELIVNIKDTSVLNVISVTELFFISNSVAGTYSRYYEVFIITSVIYFFLTFT 388

Query: 381 IALFMNRLNAKI 392
           ++L + ++  +I
Sbjct: 389 LSLILKQIEKRI 400


>gi|145295857|ref|YP_001138678.1| hypothetical protein cgR_1782 [Corynebacterium glutamicum R]
 gi|140845777|dbj|BAF54776.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 228

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 3/123 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+ F+AE +RSG+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +  + L 
Sbjct: 107 YTSTFVAESLRSGINTVHFGQAEAARSLGLGFGATFRSIIFPQAVRAAIVPLGNTLIALT 166

Query: 336 KNSSLA--VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           KN+++A  + VG A L+ +  TI N       +  I+   ++ L++ + L + +L+ ++A
Sbjct: 167 KNTTIASVIGVGEASLL-MKATIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLSERLA 225

Query: 394 LKE 396
           +K+
Sbjct: 226 VKK 228


>gi|296454519|ref|YP_003661662.1| polar amino acid ABC transporter inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296183950|gb|ADH00832.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
          Length = 220

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 14/149 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG++L++    L R         +   YI  F   G P LV +   + + F  P +G
Sbjct: 31  SFALGLILAI-VVALVRVAKVPVASQIAWFYIWVFR--GTPLLVQL---FVIFFGLPSVG 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                      P   S  IA S    A+ AE +R  ++AVP+GQ+EA +A  + +    R
Sbjct: 85  --------ITIPALPSAVIAFSLNVGAYAAETLRGAILAVPKGQLEAGLAANMPYVTIMR 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++LPQA RS  P L + ++ L+K++SLA
Sbjct: 137 RIILPQAFRSAFPALFNSFIALVKDTSLA 165


>gi|258623969|ref|ZP_05718922.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258583763|gb|EEW08559.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603]
          Length = 229

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 4/123 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y        L   +FI    +SP F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLFLITGDFI---EISP-FISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPAHAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLV 350
           DL+
Sbjct: 172 DLL 174


>gi|332040825|gb|EGI77197.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 226

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 5/109 (4%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +F G   +SP F +   AL+   +A+ AE+ R    A+P+GQ+EAA +LGL   +    V
Sbjct: 81  HFDGAIDLSP-FAAGVFALALVFSAYAAEVFRGSFAAIPKGQIEAAQSLGLRPAQTFFAV 139

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            LPQA R  +P L + + +LLK++SL   VG  DL+       N  GQA
Sbjct: 140 RLPQAWRIALPSLGNLWQSLLKDTSLVSVVGLEDLLKKA----NMAGQA 184


>gi|298379950|ref|ZP_06989555.1| arginine transporter permease subunit ArtQ [Escherichia coli
           FVEC1302]
 gi|298279648|gb|EFI21156.1| arginine transporter permease subunit ArtQ [Escherichia coli
           FVEC1302]
          Length = 226

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 43  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 98

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 99  LSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 158

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 159 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 218

Query: 393 ALKEKK 398
              E++
Sbjct: 219 TRFERR 224


>gi|213691657|ref|YP_002322243.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|317481626|ref|ZP_07940661.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium
           sp. 12_1_47BFAA]
 gi|213523118|gb|ACJ51865.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|316916916|gb|EFV38303.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium
           sp. 12_1_47BFAA]
 gi|320457746|dbj|BAJ68367.1| putative amino acid ABC transporter permease component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 220

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 27/209 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG++L++    L R         +   YI  F   G P LV +   + + F  P +G
Sbjct: 31  SFALGLILAI-VVALVRVAKVPVASQIAWFYIWVFR--GTPLLVQL---FVIFFGLPSVG 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                      P   S  IA S    A+ AE +R  ++AVP+GQ+EA +A  + +    R
Sbjct: 85  --------ITIPALPSAVIAFSLNVGAYAAETLRGAILAVPKGQLEAGLAANMPYVTIMR 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW-- 370
            ++LPQA RS  P L + ++ L+K++SLA  +          T++     A  I+ I+  
Sbjct: 137 RIILPQAFRSAFPALFNSFIALVKDTSLAANI----------TVVEMFMTAQRIVAIYYE 186

Query: 371 -MFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + +Y+ + ++  LF   L       EKK
Sbjct: 187 PLVLYIEVGLIYLLFCTLLGWLQDYCEKK 215


>gi|260430643|ref|ZP_05784615.1| L-cystine transport system permease protein TcyL [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418084|gb|EEX11342.1| L-cystine transport system permease protein TcyL [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 224

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEF 266
            R F       L LL+IS F   G P LV + L Y   +  P V+     I G T +   
Sbjct: 44  ERVFRVPVLDQLVLLFISFFR--GTPLLVQLFLFY---YGLPQVMSFLTAIDGVTAA--- 95

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               + L+ + AA++AE +R+ +I V R Q EAA ++G+T  +  R V+LPQA R   P 
Sbjct: 96  ---IMGLTLHFAAYMAETIRAAIIGVDRSQWEAAQSIGMTQGQMMRRVILPQAARVAAPT 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVS 351
           L + +++++K +SLA  +G  +++ 
Sbjct: 153 LVNYFIDMIKGTSLAFTLGVTEMMG 177


>gi|225387881|ref|ZP_03757645.1| hypothetical protein CLOSTASPAR_01651 [Clostridium asparagiforme
           DSM 15981]
 gi|225046008|gb|EEG56254.1| hypothetical protein CLOSTASPAR_01651 [Clostridium asparagiforme
           DSM 15981]
          Length = 263

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS  T A++AE VR G++++  GQ E A ++G+TH +    V+LPQA+R+I+P + +  +
Sbjct: 113 LSINTGAYMAETVRGGILSIDPGQTEGAKSIGMTHVQTMIYVILPQALRNIMPQIGNNLI 172

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K+S +   +G A+L+              E   I M +Y  ++   +  + RL  K+
Sbjct: 173 INIKDSCVLSVIGLAELLYKTKAAAGALYMNFETYTITMIMYFIMTFTCSRILRRLENKM 232


>gi|114769151|ref|ZP_01446777.1| putative amino acid ABC transporter permease protein [alpha
           proteobacterium HTCC2255]
 gi|114550068|gb|EAU52949.1| putative amino acid ABC transporter permease protein [alpha
           proteobacterium HTCC2255]
          Length = 222

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 22/198 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+ +     + SF +G+       RLSRH+     +A+  +Y+  F   G   +V +  
Sbjct: 21  LTLASGVVALIISFTVGL------ARLSRHW---VVRAIATIYLEFFR--GTSAIVQM-- 67

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P+LG F         P  M+  +A      A+ +E+VR+ + +V R Q EAA
Sbjct: 68  -FFMYFVLPLLGVF--------LPALMAGIVACGFNLGAYGSEVVRASVQSVGREQREAA 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            AL  T+ +  R VL+PQA+  +IP   +  + LLK +++A  +  +DL  +   I  QT
Sbjct: 119 KALNYTNFQLYRHVLIPQAIPVMIPSFGNLVIELLKLTAVASLITISDLTFMSQIIRVQT 178

Query: 361 GQAIEIILIWMFIYLSLS 378
              +E +++ M IY  LS
Sbjct: 179 ALTLEPLILIMVIYFILS 196


>gi|23336346|ref|ZP_00121567.1| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189438885|ref|YP_001953966.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|296454583|ref|YP_003661726.1| polar amino acid ABC transporter inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
 gi|317481690|ref|ZP_07940723.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|322691617|ref|YP_004221187.1| glutamate ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|189427320|gb|ACD97468.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|291516217|emb|CBK69833.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|296184014|gb|ADH00896.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
 gi|316916869|gb|EFV38258.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456473|dbj|BAJ67095.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 225

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +             G      K LPL  I  F++ G             
Sbjct: 29  LFSLILGVILVVMRISPISSLRAVAGAYVELFKNLPLTIIMVFMVLG------------- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                   Q       T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EAA AL
Sbjct: 76  -----AYAQLKLSFSDTFTTNFFWLAVTGLSLYTAAFVCESLRSGINTVPIGQAEAARAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTG 361
           GL   ++   ++LPQA R  + PL +  + LLKN +  A A    +  S+   +I  +  
Sbjct: 131 GLGFMQSATEIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEFRPD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             I+I LI+   Y+ L I I +    L+ K+A++ 
Sbjct: 191 VIIQIFLIFALGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|85705013|ref|ZP_01036113.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670335|gb|EAQ25196.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 261

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 6/175 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  Q+ +I GS + P     +    +AL+   A +  E
Sbjct: 88  IIRGTPLLLQIWLLY--YGLGSLFPQYPWIRGSELWPYLRQAWPYAVLALTLSYAGYEGE 145

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R G  +V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   
Sbjct: 146 VMRGGFASVQKGQLEAARAFGMPRFTIFRRIWLPQAIRNVLPTLGGETILQLKATPLVAT 205

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   ++ SV   +   T    E +L+   +Y+ ++ +IAL    +  ++  + ++
Sbjct: 206 ITVIEIYSVSNRVRADTFIVYEPLLLLALVYMIIAGLIALMFRWVENRVPTRRQQ 260


>gi|304405414|ref|ZP_07387073.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304345453|gb|EFM11288.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 305

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 67/108 (62%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T AFI+E +R+G+ AV RGQ EAA+A+G+T  ++   ++LPQA+   +P + +  + 
Sbjct: 105 GLHTGAFISETIRAGVGAVDRGQTEAALAIGMTGYQSFLRIVLPQAVAVSMPVVANLVIA 164

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            LK++SLA ++G  ++     T+   T   IE+ +    IY ++S+++
Sbjct: 165 NLKDTSLAFSLGVMEMTGKSQTLGQATQHFIEVYIALSAIYFAVSMVL 212


>gi|302023524|ref|ZP_07248735.1| amino acid ABC transporter permease protein [Streptococcus suis
           05HAS68]
          Length = 174

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 56/91 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +EI R G+ A+P+GQ EAA  L  T  +  R ++LPQ ++ ++P + ++
Sbjct: 50  LAFTLNYAAYFSEIFRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNE 109

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            + L+K++SL  A+G +DL+    T  N+  
Sbjct: 110 VMTLVKDTSLVYALGVSDLLLASRTAANRDA 140


>gi|295693564|ref|YP_003602174.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|295031670|emb|CBL51149.1| Amino acid ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
          Length = 215

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 1/128 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P + +   A     AA+ AEI R G  ++  GQ EAA  L L   +    +++PQ ++
Sbjct: 82  VFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLRLNRWQTMTKIIIPQVIK 141

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P + ++ +NL+K+SSL   +G  DL+  G   + +    + ++L+ + IYL L  + 
Sbjct: 142 IVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARDVTLVPLVLVGV-IYLLLIGIC 200

Query: 382 ALFMNRLN 389
           A  + +L 
Sbjct: 201 AFVLKKLE 208


>gi|222480219|ref|YP_002566456.1| polar amino acid ABC transporter, inner membrane subunit
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222453121|gb|ACM57386.1| polar amino acid ABC transporter, inner membrane subunit
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 308

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 20/224 (8%)

Query: 179 PTLTMDT--NAKIFVFSFVLG--IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           P L+  T     I   S VLG  I + L  TR+   F       L L Y  T L+ G P 
Sbjct: 88  PALSRGTWLTVVITAMSLVLGFFIAVPLAVTRVYGRFS----AWLSLAY--TELLRGTPL 141

Query: 235 LV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLI 290
           L  L  L Y L+    V G  + +    V      +++A+  +T   AA+ AE +R  L 
Sbjct: 142 LAQLFVLYYGLNLASYVPGSVSGVFARDV------VWVAILGFTLNGAAYQAEYIRGALE 195

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQ+ A  A+GL+  +    V+LPQ +R  IP  T++++ L+K SSLA  +   +L 
Sbjct: 196 SVEEGQITAGRAIGLSKVETIYYVVLPQGLRYAIPSWTNEFVYLIKYSSLAAFITVPELY 255

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                I ++T +   I ++    YL+L +  +  M R+  ++A+
Sbjct: 256 YRADQIASETFRYTLIFVVTGLTYLALVLTASKLMERVEERVAI 299


>gi|330833059|ref|YP_004401884.1| amino acid (glutamine) ABC transporter permease [Streptococcus suis
           ST3]
 gi|329307282|gb|AEB81698.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis ST3]
          Length = 213

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 56/91 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +EI R G+ A+P+GQ EAA  L  T  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFSEIFRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            + L+K++SL  A+G +DL+    T  N+  
Sbjct: 149 VMTLVKDTSLVYALGVSDLLLASRTAANRDA 179


>gi|293380807|ref|ZP_06626848.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|290922631|gb|EFD99592.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
          Length = 216

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 27/180 (15%)

Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           LY+  F I  +PT+VL+ L Y      LH + P                +M++ +A S +
Sbjct: 53  LYLEFFRI--VPTVVLLYLVYYILPRSLHVNWPA--------------TWMAV-LAFSMW 95

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA  ++IVR  L + P+ Q E+ +ALGL   +  R VLLPQA++  +P   +    ++K
Sbjct: 96  VAAEFSDIVRGALESFPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIK 155

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391
            +SL + +   ++++VG  II    Q     + W++     +Y  L   ++ +  RL AK
Sbjct: 156 TTSLLMIINIMEVINVGQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 215



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 38/68 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S    ++ G   + W+A   +I    +GT+ G  R   N+ + ++ R+Y+E FR +P 
Sbjct: 4   EGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPT 63

Query: 142 LVVIFFLY 149
           +V+++ +Y
Sbjct: 64  VVLLYLVY 71


>gi|297520268|ref|ZP_06938654.1| arginine transporter permease subunit ArtQ [Escherichia coli OP50]
          Length = 177

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R
Sbjct: 40  VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 98

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++ 
Sbjct: 99  HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 158

Query: 382 ALFMNRLNAKIALKEKK 398
              + R++ +    E++
Sbjct: 159 QYILKRIDLRATRFERR 175


>gi|167836672|ref|ZP_02463555.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia thailandensis MSMB43]
          Length = 249

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA++ +
Sbjct: 109 PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVKIM 168

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 169 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 204


>gi|86357760|ref|YP_469652.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86281862|gb|ABC90925.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 241

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 10/225 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T+  +   F+   ++G V++    +LSRH    T + L   Y  T ++ G+P L
Sbjct: 23  LTAAAMTIGVSVCGFLTGTLIGTVVTFM--QLSRHL---TIRWLADCY--TTVLRGVPDL 75

Query: 236 VLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           ++I L Y     F   + G F + G   + P F++  +AL   +AA+ AE+ R    +V 
Sbjct: 76  LVIYLFYFGGSAFLGSLGGMFGYQGFIGM-PAFLTGTLALGAVSAAYQAEVFRGAYRSVA 134

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RG++EAAIA+G+      R ++ P  +R  IP L + +  +LK S+L    G  +L+   
Sbjct: 135 RGEIEAAIAVGMRPWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALISVTGLVELLRQS 194

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 T +  E  L  + +YL ++ + ++   R+ A+     ++
Sbjct: 195 QIGAGSTRRPFEFYLTAVVLYLVITWLSSILFRRMEARTIQGTRR 239



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 13/73 (17%)

Query: 90  LVGFVNTFW-------------LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           LVGF  T W             ++  G +  T+IGT+V   +LS +  + W+   Y  V 
Sbjct: 10  LVGFGQTGWGWLLLTAAAMTIGVSVCGFLTGTLIGTVVTFMQLSRHLTIRWLADCYTTVL 69

Query: 137 RNIPPLVVIFFLY 149
           R +P L+VI+  Y
Sbjct: 70  RGVPDLLVIYLFY 82


>gi|266625817|ref|ZP_06118752.1| ABC transporter, permease protein, polar amino acid uptake family
           [Clostridium hathewayi DSM 13479]
 gi|288862281|gb|EFC94579.1| ABC transporter, permease protein, polar amino acid uptake family
           [Clostridium hathewayi DSM 13479]
          Length = 200

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 5/139 (3%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S V P   ++  AL+   AA+ +EI R+ L AV  GQ EAA ++G+T  +A   ++ PQA
Sbjct: 60  SVVPPAVYAI-AALTLDQAAYSSEIFRAALGAVDEGQREAAYSVGMTKLQAMTRIVFPQA 118

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           M   +P L   +L L+K +SLA  VG  ++ +    +       IE  LI   IY     
Sbjct: 119 MAVAMPNLGGLFLGLVKGTSLAYYVGVYEITATANLLAMPALNFIEAYLITTVIYE---- 174

Query: 380 MIALFMNRLNAKIALKEKK 398
           +I+ F NRL   +  + K+
Sbjct: 175 LISFFFNRLFGTVETRLKR 193


>gi|237732153|ref|ZP_04562634.1| arginine transporter permease subunit ArtQ [Citrobacter sp. 30_2]
 gi|226907692|gb|EEH93610.1| arginine transporter permease subunit ArtQ [Citrobacter sp. 30_2]
          Length = 238

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L         L F + PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLADGFTINLGFVQIPVQMQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYAAYASQTLRGALKAVPLGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|225854140|ref|YP_002735652.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|225723253|gb|ACO19106.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
          Length = 219

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNSVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|167841845|ref|ZP_02468529.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia thailandensis MSMB43]
          Length = 229

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 2/129 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +++S   +A++ EIVRSGL +V   Q EAA+ L   + K  R V++PQA R I+PP    
Sbjct: 102 VSVSLIASAYLGEIVRSGLESVHPNQREAAVTLNFGYLKMLRYVVVPQAWRVIVPPTFGF 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-IWMFIYLSLSIMIALFMNRLN 389
           ++  +K+++LA  +G  +L S  G ++N  G +  ++    + +Y  +S  ++ F   L 
Sbjct: 162 FVMFIKDTALASQIGVMELTS-AGKVLNDKGFSAGLVYGAILLLYFVMSYPLSRFGKHLE 220

Query: 390 AKIALKEKK 398
             +A    +
Sbjct: 221 KSLAATRNR 229


>gi|153812543|ref|ZP_01965211.1| hypothetical protein RUMOBE_02942 [Ruminococcus obeum ATCC 29174]
 gi|149831468|gb|EDM86556.1| hypothetical protein RUMOBE_02942 [Ruminococcus obeum ATCC 29174]
          Length = 215

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 76/142 (53%), Gaps = 1/142 (0%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G F   G +  + +F ++ +  S   AA+ AEI RSG+ ++P GQ EAA  LG    + 
Sbjct: 71  FGPFYLWGMNIGNYKFTAIILGCSLNYAAYFAEIYRSGIESIPVGQYEAAQLLGYNKSQT 130

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQ ++ ++P +T++ + L+K++SL  +V + ++ ++   I       +  ++  
Sbjct: 131 FFKIVLPQVVKIVLPSVTNEVITLVKDTSLVYSVSYIEMFALAKQIAAAQTTVVPFVIAG 190

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
           +F Y+  + ++A  M     K+
Sbjct: 191 VFYYI-FNFVVAWVMEWFEKKL 211


>gi|146278102|ref|YP_001168261.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556343|gb|ABP70956.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 221

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G  +SP F ++ +A     +A+ AEI R+G+ +VP GQ EAA A GLT  +    V+LP
Sbjct: 87  AGLAISP-FAAVAVAFFLNNSAYYAEIYRAGIQSVPTGQTEAARACGLTTGQTLAHVVLP 145

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           QA+R+++P L S  + ++K +SLA  V  A+L+
Sbjct: 146 QAVRNVLPDLLSNTVEVVKLTSLASVVSLAELL 178


>gi|293364949|ref|ZP_06611666.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307703200|ref|ZP_07640146.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|291316399|gb|EFE56835.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307623275|gb|EFO02266.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.4 bits (85), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|317053915|ref|YP_004117940.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951910|gb|ADU71384.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 227

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 72/123 (58%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    AA+ +EI+R GL AV    +EAA   G++     R + LP A+R  +P  +++
Sbjct: 98  IALILNDAAYTSEILRGGLNAVSVQSLEAAKVCGMSRFTTLRRITLPIAIRQALPAYSNE 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM----IALFMN 386
            ++++K++SL   +   ++  +  +I+++T +A+E+ L    IYL L+++    +AL   
Sbjct: 158 IISMIKSTSLVSTISLMEMTGIADSIVSETFRALEVFLSAAIIYLLLTVLVSKGVALLER 217

Query: 387 RLN 389
           RL+
Sbjct: 218 RLS 220


>gi|224418905|ref|ZP_03656911.1| hypothetical protein HcanM9_06475 [Helicobacter canadensis MIT
           98-5491]
 gi|253827858|ref|ZP_04870743.1| ABC-type amino acid transport system, permease component
           [Helicobacter canadensis MIT 98-5491]
 gi|313142419|ref|ZP_07804612.1| polar amino acid ABC transporter [Helicobacter canadensis MIT
           98-5491]
 gi|253511264|gb|EES89923.1| ABC-type amino acid transport system, permease component
           [Helicobacter canadensis MIT 98-5491]
 gi|313131450|gb|EFR49067.1| polar amino acid ABC transporter [Helicobacter canadensis MIT
           98-5491]
          Length = 217

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 29/171 (16%)

Query: 191 VFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +F FVLG +++L   F + L R F+ ++ + +P+L     + FG  + +           
Sbjct: 33  IFGFVLGYLMTLPNRFLSFLCR-FYLESIRIIPILAWLFIVYFGFSSFL----------- 80

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                  N IG            +  S +  A + ++VR  + ++PR Q E+  ALGL+ 
Sbjct: 81  -----NLNGIGACI---------LVFSLWGIAEMGDLVRGAISSLPRHQSESGRALGLSE 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +    ++LPQ+ R ++PPL + +  ++K +SLA  +G +D++ VG  II 
Sbjct: 127 IQIQVFIILPQSFRRLLPPLVNLFTRMIKTTSLAALIGVSDMLKVGQQIIE 177


>gi|163742836|ref|ZP_02150220.1| amino acid ABC transporter, permease protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383800|gb|EDQ08185.1| amino acid ABC transporter, permease protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 446

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 53/80 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + +A++AE VR GL  V  GQ EAA +LGL + K   LV+LPQA++++IP + S 
Sbjct: 314 VGVCLFFSAYMAETVRGGLQVVAVGQTEAAKSLGLGYWKTMYLVVLPQALKAMIPNIVSN 373

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L K+++L   +G  D++
Sbjct: 374 FIALFKDTTLVSIIGLYDML 393


>gi|146318204|ref|YP_001197916.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis 05ZYH33]
 gi|146320398|ref|YP_001200109.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis 98HAH33]
 gi|253751386|ref|YP_003024527.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|253753287|ref|YP_003026427.1| amino acid ABC transporter permease protein [Streptococcus suis
           P1/7]
 gi|253755882|ref|YP_003029022.1| amino acid ABC transporter permease protein [Streptococcus suis
           BM407]
 gi|145689010|gb|ABP89516.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis 05ZYH33]
 gi|145691204|gb|ABP91709.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis 98HAH33]
 gi|251815675|emb|CAZ51263.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251818346|emb|CAZ56170.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251819532|emb|CAR45120.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|292558005|gb|ADE31006.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis GZ1]
 gi|319757672|gb|ADV69614.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis JS14]
          Length = 213

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 56/91 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +EI R G+ A+P+GQ EAA  L  T  +  R ++LPQ ++ ++P + ++
Sbjct: 89  LAFTLNYAAYFSEIFRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            + L+K++SL  A+G +DL+    T  N+  
Sbjct: 149 VMTLVKDTSLVYALGVSDLLLASRTAANRDA 179


>gi|49079084|gb|AAT49852.1| PA1257 [synthetic construct]
          Length = 215

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y AA+ AE+VR G+++VP     AA +LGL++R+    ++LP A R   P   + 
Sbjct: 91  LVLGVYAAAYCAEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L+++K++SL + +G  +L+    TI+ +  + + ++ I   +Y  +S ++A    RL A
Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVA----RLGA 206

Query: 391 KIALKEKK 398
           ++  + ++
Sbjct: 207 RLERRWQQ 214


>gi|126463864|ref|YP_001044977.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126105675|gb|ABN78205.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 221

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G  +SP F ++ +A     +A+ AEI R+G+ +VP GQ EAA A GLT  +    V+LP
Sbjct: 87  AGLAISP-FAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHVVLP 145

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           QA+R+++P L S  + ++K +SLA  V  A+L+
Sbjct: 146 QAVRNVLPDLLSNTVEVVKLTSLASVVSLAELL 178


>gi|296102998|ref|YP_003613144.1| allantoate transport membrane protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057457|gb|ADF62195.1| allantoate transport membrane protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ YT+AF+ +I    + A+P+GQ EA+  LGLT  +    V+ PQ
Sbjct: 81  GIDVSP-WTAASLALTFYTSAFLLDIWFGSIRALPKGQWEASRCLGLTFGQTLYRVVAPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 140 ALRIAIAPTVGFAVQVIKGTALASIIGFIELTKAGTMLTNVTYQPFKV 187


>gi|218704289|ref|YP_002411808.1| arginine permease ArtQ [Escherichia coli UMN026]
 gi|293404167|ref|ZP_06648161.1| arginine transporter permease subunit ArtQ [Escherichia coli
           FVEC1412]
 gi|300901229|ref|ZP_07119330.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|301020604|ref|ZP_07184681.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|331662274|ref|ZP_08363197.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA143]
 gi|218431386|emb|CAR12264.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli UMN026]
 gi|291428753|gb|EFF01778.1| arginine transporter permease subunit ArtQ [Escherichia coli
           FVEC1412]
 gi|300355303|gb|EFJ71173.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300398622|gb|EFJ82160.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|331060696|gb|EGI32660.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA143]
          Length = 238

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|91209896|ref|YP_539882.1| arginine transporter permease subunit ArtQ [Escherichia coli UTI89]
 gi|110641063|ref|YP_668793.1| arginine transporter permease subunit ArtQ [Escherichia coli 536]
 gi|117623042|ref|YP_851955.1| arginine transporter permease subunit ArtQ [Escherichia coli APEC
           O1]
 gi|191172131|ref|ZP_03033675.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           F11]
 gi|218557766|ref|YP_002390679.1| arginine transporter permease subunit ArtQ [Escherichia coli S88]
 gi|218688644|ref|YP_002396856.1| arginine transporter permease subunit ArtQ [Escherichia coli ED1a]
 gi|237707174|ref|ZP_04537655.1| arginine transporter permease subunit ArtQ [Escherichia sp.
           3_2_53FAA]
 gi|300991844|ref|ZP_07179669.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|306812689|ref|ZP_07446882.1| arginine transporter permease subunit ArtQ [Escherichia coli NC101]
 gi|91071470|gb|ABE06351.1| arginine 3rd transport system permease protein [Escherichia coli
           UTI89]
 gi|110342655|gb|ABG68892.1| arginine transport system permease protein ArtQ [Escherichia coli
           536]
 gi|115512166|gb|ABJ00241.1| arginine 3rd transport system permease protein [Escherichia coli
           APEC O1]
 gi|190907658|gb|EDV67253.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           F11]
 gi|218364535|emb|CAR02217.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218426208|emb|CAR07032.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli ED1a]
 gi|226898384|gb|EEH84643.1| arginine transporter permease subunit ArtQ [Escherichia sp.
           3_2_53FAA]
 gi|294493134|gb|ADE91890.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           IHE3034]
 gi|300305454|gb|EFJ59974.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|305853452|gb|EFM53891.1| arginine transporter permease subunit ArtQ [Escherichia coli NC101]
 gi|307627729|gb|ADN72033.1| arginine transporter permease subunit ArtQ [Escherichia coli UM146]
 gi|315287306|gb|EFU46717.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315299389|gb|EFU58641.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|320196643|gb|EFW71266.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           WV_060327]
 gi|323953434|gb|EGB49300.1| inner membrane transport system [Escherichia coli H252]
 gi|323958151|gb|EGB53860.1| inner membrane transport system [Escherichia coli H263]
 gi|324009772|gb|EGB78991.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324013024|gb|EGB82243.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 238

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAVIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|53718672|ref|YP_107658.1| histidine transport system permease [Burkholderia pseudomallei
           K96243]
 gi|76809678|ref|YP_332658.1| histidine transport system permease [Burkholderia pseudomallei
           1710b]
 gi|126439463|ref|YP_001058139.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 668]
 gi|126455408|ref|YP_001065374.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106a]
 gi|134281279|ref|ZP_01767988.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 305]
 gi|167718615|ref|ZP_02401851.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei DM98]
 gi|167737643|ref|ZP_02410417.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 14]
 gi|167814778|ref|ZP_02446458.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 91]
 gi|167823232|ref|ZP_02454703.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 9]
 gi|167851714|ref|ZP_02477222.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei B7210]
 gi|167900311|ref|ZP_02487712.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 7894]
 gi|167908463|ref|ZP_02495668.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei NCTC 13177]
 gi|167916791|ref|ZP_02503882.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 112]
 gi|167918057|ref|ZP_02505148.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei BCC215]
 gi|217420034|ref|ZP_03451540.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 576]
 gi|226194409|ref|ZP_03790007.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pakistan 9]
 gi|237811358|ref|YP_002895809.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242315876|ref|ZP_04814892.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106b]
 gi|254181369|ref|ZP_04887966.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1655]
 gi|254190769|ref|ZP_04897276.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196202|ref|ZP_04902626.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei S13]
 gi|254258583|ref|ZP_04949637.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1710a]
 gi|254298304|ref|ZP_04965756.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 406e]
 gi|52209086|emb|CAH35027.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|76579131|gb|ABA48606.1| histidine transport system permease protein [Burkholderia
           pseudomallei 1710b]
 gi|126218956|gb|ABN82462.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 668]
 gi|126229050|gb|ABN92590.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106a]
 gi|134247585|gb|EBA47670.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 305]
 gi|157808176|gb|EDO85346.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 406e]
 gi|157938444|gb|EDO94114.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169652945|gb|EDS85638.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei S13]
 gi|184211907|gb|EDU08950.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1655]
 gi|217397338|gb|EEC37354.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 576]
 gi|225933494|gb|EEH29483.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pakistan 9]
 gi|237503472|gb|ACQ95790.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242139115|gb|EES25517.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106b]
 gi|254217272|gb|EET06656.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1710a]
          Length = 229

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 9/160 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKPVL 251
           SF+LG+V +  A +LSR+   +    +  LY  T LI G+P LVL+ L  Y L      L
Sbjct: 28  SFLLGLVGA--AAKLSRN---RVSNGIGTLY--TTLIRGVPDLVLMLLLFYSLQIWLNQL 80

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     + P F +  + L     A+  E  R   ++VPRGQ+EA  A G+T+ +  
Sbjct: 81  TDLMNWDQIDIDP-FAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVF 139

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
             V+ PQ MR  +P + + +  L+K+++L   +G AD+V 
Sbjct: 140 ARVMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179


>gi|149909992|ref|ZP_01898641.1| amino acid ABC transporter, permease protein [Moritella sp. PE36]
 gi|149807006|gb|EDM66965.1| amino acid ABC transporter, permease protein [Moritella sp. PE36]
          Length = 254

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 29/228 (12%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL------- 240
           K+ +FS V+ ++L L  T ++R+   K    L + Y S  L+ G+P LVL+ L       
Sbjct: 20  KLAIFSLVIAVLLGLI-TAVARYSGGKISSVLAVSYTS--LVRGVPDLVLMMLIYFGLQV 76

Query: 241 --------KYQLHFDKPVLGQFNFIGGSTVS-----------PEFMSLYIALSCYTAAFI 281
                    Y+LH    +   +   G  T+S            EF +  + +     A++
Sbjct: 77  GLNNFSEWLYELHETYAINAFYIEHGWLTLSAFYEDGMYFNIDEFSAGVLTIGFIFGAYM 136

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  L++V +GQ+EAA A G++  +    V+ PQ MR  +P + + +L L+K ++L 
Sbjct: 137 GETFRGALLSVDKGQLEAATAYGMSDWQVFHRVMFPQMMRFALPGIGNNWLVLVKTTALV 196

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +G +D+V +       T +     +   F+YL+++ +  + +  L 
Sbjct: 197 SIIGLSDMVKLAKEAAMTTFEPFLFFIPVAFVYLAITTVSEIVLKYLE 244


>gi|15596454|ref|NP_249948.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|107100706|ref|ZP_01364624.1| hypothetical protein PaerPA_01001733 [Pseudomonas aeruginosa PACS2]
 gi|9947189|gb|AAG04646.1|AE004555_6 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
          Length = 214

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y AA+ AE+VR G+++VP     AA +LGL++R+    ++LP A R   P   + 
Sbjct: 91  LVLGVYAAAYCAEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L+++K++SL + +G  +L+    TI+ +  + + ++ I   +Y  +S ++A    RL A
Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVA----RLGA 206

Query: 391 KIALKEKK 398
           ++  + ++
Sbjct: 207 RLERRWQQ 214


>gi|194433150|ref|ZP_03065432.1| arginine ABC transporter, permease protein ArtQ [Shigella
           dysenteriae 1012]
 gi|194418647|gb|EDX34734.1| arginine ABC transporter, permease protein ArtQ [Shigella
           dysenteriae 1012]
 gi|320177804|gb|EFW52790.1| Arginine ABC transporter, permease protein ArtQ [Shigella boydii
           ATCC 9905]
 gi|332091031|gb|EGI96121.1| arginine transport system permease protein artQ [Shigella
           dysenteriae 155-74]
          Length = 238

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPMGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|23464651|ref|NP_695254.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           longum NCC2705]
 gi|239620727|ref|ZP_04663758.1| glutamate transport system permease protein gluC [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|312132338|ref|YP_003999677.1| hism1 [Bifidobacterium longum subsp. longum BBMN68]
 gi|322689656|ref|YP_004209390.1| glutamate ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|23325210|gb|AAN23890.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           longum NCC2705]
 gi|239516303|gb|EEQ56170.1| glutamate transport system permease protein gluC [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|311773869|gb|ADQ03357.1| HisM1 [Bifidobacterium longum subsp. longum BBMN68]
 gi|320460992|dbj|BAJ71612.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 225

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 27/215 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS +LG++L +             G      K LPL  I  F++ G         + +L
Sbjct: 29  LFSLILGVILVVMRISPISSLRAVAGAYVELFKNLPLTIIMVFMVLGAYA------QLKL 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            F              T +  F  L +  LS YTAAF+ E +RSG+  VP GQ EAA AL
Sbjct: 83  SFSD------------TFATNFFWLAVTGLSLYTAAFVCESLRSGINTVPIGQAEAARAL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN-SSLAVAVGFADLVSVGGTIIN-QTG 361
           GL   ++   ++LPQA R  + PL +  + LLKN +  A A    +  S+   +I  +  
Sbjct: 131 GLGFMQSATEIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSLMSEMIEFRPD 190

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             I+I LI+   Y+ L I I +    L+ K+A++ 
Sbjct: 191 VIIQIFLIFALGYVILIIPIGMLTTYLSNKLAVRR 225


>gi|257125144|ref|YP_003163258.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049083|gb|ACV38267.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 237

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 15/178 (8%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       +GLP ++  I LKY  + D       N I      P  + +Y+A   
Sbjct: 68  RGTPLLVQIYLAYYGLPKILDYIHLKYGFNID------VNNI------PAIIFVYVAFIL 115

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             + +++E  R+ + +V +GQ+EAA+++G+T  +A R ++LPQA+    P   + +++L+
Sbjct: 116 NVSGYLSETFRAAIQSVDKGQVEAALSIGMTKWQAMRRIVLPQAIIITFPNFGNTFISLI 175

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K+SSLA  V   +++     II+ +G  I E  ++   IY  + I++   M  +  K+
Sbjct: 176 KDSSLAFTVSIVEMMG-KAKIISASGLDIFEAYIVVAGIYWVVCIIVEKVMGIVEKKL 232


>gi|221369463|ref|YP_002520559.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221162515|gb|ACM03486.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 221

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G  +SP F ++ +A     +A+ AEI R+G+ +VP GQ EAA A GLT  +    V+LP
Sbjct: 87  AGLAISP-FAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHVVLP 145

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           QA+R+++P L S  + ++K +SLA  V  A+L+
Sbjct: 146 QAVRNVLPDLLSNTVEVVKLTSLASVVSLAELL 178


>gi|167562818|ref|ZP_02355734.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia oklahomensis EO147]
          Length = 206

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 23/143 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P+L +  +  F LP L        LH D P L                ++  ALS  
Sbjct: 29  RAIPVLMLIFWTYFLLPVL--------LHADVPGLA---------------AVVCALSLV 65

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA++ + P   +Q+++L+K
Sbjct: 66  GGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRYVLLPQAVKIMTPSFVNQWVSLVK 125

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
           ++SLA  VG  +L  V   + N+
Sbjct: 126 DTSLAYIVGVPELSFVATQVNNR 148


>gi|149005716|ref|ZP_01829455.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|303260099|ref|ZP_07346072.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303261283|ref|ZP_07347231.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303263948|ref|ZP_07349869.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303265939|ref|ZP_07351835.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303268321|ref|ZP_07354118.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|307126806|ref|YP_003878837.1| glutamine ABC transporter membrane-spanning permease [Streptococcus
           pneumoniae 670-6B]
 gi|147762656|gb|EDK69616.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|302637417|gb|EFL67904.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638794|gb|EFL69256.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302642159|gb|EFL72509.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302644523|gb|EFL74774.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646353|gb|EFL76579.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|306483868|gb|ADM90737.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 670-6B]
 gi|332077037|gb|EGI87499.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|16079987|ref|NP_390813.1| sulfur-containing amino acid ABC transporter permease [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221310879|ref|ZP_03592726.1| hypothetical protein Bsubs1_16021 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315204|ref|ZP_03597009.1| hypothetical protein BsubsN3_15917 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320122|ref|ZP_03601416.1| hypothetical protein BsubsJ_15833 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324404|ref|ZP_03605698.1| hypothetical protein BsubsS_15992 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|7674451|sp|O34931|TCYM_BACSU RecName: Full=L-cystine transport system permease protein tcyM
 gi|2293250|gb|AAC00328.1| transporter [Bacillus subtilis]
 gi|2635400|emb|CAB14895.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 235

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 67/118 (56%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  M + +ALS    A++ EI+RSG++A+  GQ+EAA ++GLT+ +  R V+LPQA++  
Sbjct: 99  PVSMFVIMALSLTAGAYLTEIIRSGILAMDTGQVEAAYSIGLTYSQTFRRVILPQALKVS 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           IP  T+  +  L  +S+A  V   ++      + +     +E  +    IY  L++++
Sbjct: 159 IPNFTNLGIGFLHTTSIAAIVAVPEITGTATIVASDNYAFLEAFIGAAIIYWVLTLIL 216


>gi|225860605|ref|YP_002742114.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|225727812|gb|ACO23663.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390342|gb|EGE88683.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|209515404|ref|ZP_03264270.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209504124|gb|EEA04114.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 218

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 34/198 (17%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALK 241
            + S VLG+  +L   ++SR+ H   G        + LP++ +  ++ F LP        
Sbjct: 28  LLLSTVLGLTWALL--KMSRYPHVVRGVSAMINVVRGLPMIVLLFYIYFVLP-------- 77

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             +H     L Q + IG              L    + +IAEI R+G+ AV  GQ EAA 
Sbjct: 78  -DIHIQVTAL-QASIIG--------------LGFGYSTYIAEIFRAGIEAVDPGQYEAAQ 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ++G+   K    V+LPQA++  +PP ++  + +LK+SSLA  +  A++   G  I + T 
Sbjct: 122 SIGMGRVKTMVRVILPQAIKVALPPYSNTLVMMLKDSSLASTITVAEMTREGQLIASSTF 181

Query: 362 QAIEIILIWMFIYLSLSI 379
           Q + +  +    YL++S+
Sbjct: 182 QNLTVYTLVALGYLAMSL 199


>gi|68249725|ref|YP_248837.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           86-028NP]
 gi|68057924|gb|AAX88177.1| arginine transport system permease protein [Haemophilus influenzae
           86-028NP]
          Length = 221

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F     ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEILTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     +   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLIHQADLMNTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|33595040|ref|NP_882683.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33565117|emb|CAE35912.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis]
          Length = 227

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 15/150 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           ++LPL+ +   + F LP L    L++    ++P+      + G+T S      ++    +
Sbjct: 65  RSLPLVLVIFLIYFILPYL----LQWITQAERPI------VLGATGSA-----FVTFILF 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ +EI+R+G+ +V  GQ  A  ALGLTH +  R V+LPQA+R+++P L +Q + + +
Sbjct: 110 EAAYFSEIIRAGIGSVGPGQYAAGSALGLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQ 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            ++L   +   D +     I  +  + +E+
Sbjct: 170 ETALVYVLSLPDFLGAATKIAQRDNRLVEM 199



 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 33/60 (55%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  L  S      ++G L+   RL   + VAW+  +YV +FR++P ++VIF +Y
Sbjct: 18  LTGLRFSLLLTLSSAAGGVVLGALLAIARLYGRRWVAWLAAIYVNLFRSLPLVLVIFLIY 77


>gi|183396653|dbj|BAG28252.1| permease protein of amino acid ABC transporter [Desulfotignum
           balticum]
          Length = 220

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 28/212 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV--LIALKYQLHFDK 248
           VFSFVL + +S+    L      ++G+              LP +V  L+ +  ++  + 
Sbjct: 27  VFSFVLALAVSVLVGVL------RSGR--------------LPWIVDFLLGVYVEIFRNT 66

Query: 249 PVLGQFNFI--GGST---VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           P+L Q  FI  G  T   V P   +  I LS  + A+++E VR+ + +V +GQ EAA +L
Sbjct: 67  PLLIQLFFIYYGLPTFGIVLPPVTAAVIGLSLNSGAYMSEAVRAAISSVNKGQYEAAFSL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G    +    ++LPQA R  +P L + +  ++K +SL   +  A+L  VG  I  +T   
Sbjct: 127 GYNRYQVFLHIVLPQAFRIALPTLMNYFTTMIKETSLVSVLSIAELTRVGNQIYARTLGP 186

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            EI +    +Y  ++  +AL ++R   K  +K
Sbjct: 187 FEIYITIGAVYFVMTYSVAL-VSRWVEKKGIK 217


>gi|330816746|ref|YP_004360451.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
 gi|327369139|gb|AEA60495.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 18/208 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            VF  VL +VL+L     +R  +     A+  +Y+S  L+ G P LV I   + +++  P
Sbjct: 29  MVFGLVLAVVLALMGIARNRVLN-----AIARVYVS--LMRGTPLLVQI---FVIYYGLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG        ++ P    + IALS   AA+++E +R  ++ +  GQ  A+ +LGL+  +
Sbjct: 79  SLG-------ISLDPTPAGV-IALSANVAAYMSESMRGAILGIESGQWLASYSLGLSWGQ 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L 
Sbjct: 131 TLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +Y  L  ++         ++AL  +
Sbjct: 191 AAAVYWVLCQVLEWVQRWWERRLALPTR 218


>gi|325478268|gb|EGC81387.1| ABC transporter, permease protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 521

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 69/124 (55%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++E+VR G+ ++ +GQ EA  A+GL+  +    V+LPQ +R+I+P L ++++
Sbjct: 386 VSINTGAYLSEVVRGGINSIDKGQFEACKAIGLSEAQTMTSVILPQTIRTILPSLGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +   +L  +  ++   T Q     LI   IY  L+  I   +  L  K 
Sbjct: 446 INIKDTSVLNVISVTELFFMSKSVAGSTYQYFPTYLITAVIYFVLTFTITRILLLLERKF 505

Query: 393 ALKE 396
           + K+
Sbjct: 506 SDKD 509


>gi|297160232|gb|ADI09944.1| amino acid ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 250

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 7/152 (4%)

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L + L F  P+  QF  +      P + ++ +AL     A+ +EIVR  + AV   Q EA
Sbjct: 65  LMFWLFFVMPLGFQFQLL------PMWAAV-LALGLTYGAYGSEIVRGAIGAVAPAQREA 117

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           AIAL  T  +  R V+LPQA+  +IPP  +  + LLK ++L  AV  AD+          
Sbjct: 118 AIALSFTPAQRMRRVILPQAIPEMIPPFNNLLIELLKATALVSAVSVADITFAAQLSRLA 177

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           TG ++EI  I + +Y  L+ ++   M  L  +
Sbjct: 178 TGDSLEIYSIILVLYFVLAFVLTRLMRLLERR 209


>gi|229587874|ref|YP_002869993.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229359740|emb|CAY46589.1| putative amino acid ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 230

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 69/128 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E++R  +IA+P+G  EA +ALGL+  +    +++PQ  R  +P
Sbjct: 96  FAAGVIALGLCYGAYATEVLRGAIIAIPKGHREAGLALGLSKTRIFTRLIMPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  T Q     L+  FIYL L+ +  + M
Sbjct: 156 GLGNLFMILMKDTALVTVIGLEEIMRHAQIAVTVTRQPFTFYLVAAFIYLGLTSLSMVGM 215

Query: 386 NRLNAKIA 393
           + L  + A
Sbjct: 216 HFLEQRAA 223


>gi|207722318|ref|YP_002252754.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206587495|emb|CAQ18077.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 259

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 1/96 (1%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   AA+IA+ +++GL AV  GQ  AA+ALG++  +A   V+LPQA R +
Sbjct: 101 PETATVVTALAAVGAAYIAQSMQAGLRAVGTGQRNAALALGMSPGQALLAVVLPQAWRIM 160

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +P + +Q+++ +K++SLA  VG  +L S   + +N 
Sbjct: 161 LPSVANQWVSTVKDTSLAYIVGVVEL-STAASQVNS 195


>gi|153009566|ref|YP_001370781.1| polar amino acid ABC transporter inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561454|gb|ABS14952.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 240

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +++ +E+  S   A+PRGQ E   A+GL+H +  R V+LPQ +R  +P L + 
Sbjct: 109 VALGFVFSSYSSEVFLSAFRAIPRGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANL 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +L LLK++SL   +  +D++         T +      I   +YL L+I+ + F+NR+
Sbjct: 169 WLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLVLAIISSYFINRI 226


>gi|152979605|ref|YP_001345234.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
 gi|150841328|gb|ABR75299.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 87/156 (55%), Gaps = 9/156 (5%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +L  + P+L Q  F + G S +      F    I L+    +++AE  R+GL AV +GQ+
Sbjct: 58  ELSRNTPLLIQVFFLYFGLSKIGIRLDGFTCGIIGLAFLGGSYMAEAFRAGLEAVSKGQI 117

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+A++LGLT ++A R V+ PQA     P + +  L L+K +S+  A+  A+L+ +   II
Sbjct: 118 ESALSLGLTPQQAFRYVIFPQAFAISTPAIGANCLFLMKETSVISAIAVAELMFLAKDII 177

Query: 358 N---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
               +T +A+ +++I ++ I L +S+ I     RL 
Sbjct: 178 GMDYKTNEALFLLVIFYLIILLPVSVYIRYLERRLR 213


>gi|296532449|ref|ZP_06895173.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296267224|gb|EFH13125.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 222

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 23/152 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL +  F+ FGLP                   +F   G      +F S  + LS Y
Sbjct: 66  RCTPLLLLIFFIYFGLP-------------------EFGIYGMD----KFQSFVLTLSLY 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++E+ R+GL ++P+  +EAA A+G+   +    V+LP   R  +P +++  ++L K
Sbjct: 103 AGAYMSEVFRAGLASIPKQYVEAAKAIGMRPWQRQVYVVLPVMFRITLPSISNNLISLFK 162

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           ++SLA A+   +L  V   +   T + +E+ L
Sbjct: 163 DTSLAAAIAIPELTFVARQVNANTFRVMEVWL 194


>gi|119383777|ref|YP_914833.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373544|gb|ABL69137.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 221

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 7/151 (4%)

Query: 243 QLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +L  + P L Q  F F G    G  +SP ++++ IAL    A ++AEI R GL  V   Q
Sbjct: 62  ELARNTPCLAQIYFFFYGLGAFGIFLSP-WLAVGIALCFNNAGYLAEIFRGGLNGVNANQ 120

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           M+ A +LGL    A R ++ PQ  R+    + +Q++  L N+SL   +G  DL  V    
Sbjct: 121 MKGARSLGLGPVGAYRYIVFPQVFRNTFSSIGNQFIWALLNTSLGALIGLYDLSGVAMDY 180

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++T +  E  L    IY  L+ ++    NR
Sbjct: 181 QSRTFKTFEFFLAIAVIYFILAKLVLFLANR 211


>gi|332076440|gb|EGI86903.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|312602225|ref|YP_004022070.1| Amino acid ABC transporter permease [Burkholderia rhizoxinica HKI
           454]
 gi|312169539|emb|CBW76551.1| Amino acid ABC transporter permease protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 231

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 23/133 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P+L +  +  F LP +        LH D P  GQ   +              ALS  
Sbjct: 72  RAIPVLMLMFWTYFLLPVV--------LHIDAP--GQLTVV-------------CALSLI 108

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++  V +G+ AV   Q++A ++LG T  +A R V+LPQA+R + P   +Q+++L+K
Sbjct: 109 GGAYLSHAVYAGIRAVGAAQLQAGLSLGFTRMQALRFVVLPQALRIMAPSFINQWVSLIK 168

Query: 337 NSSLAVAVGFADL 349
           ++SLA  VG  +L
Sbjct: 169 DTSLAYIVGVPEL 181


>gi|317053174|ref|YP_004119528.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953501|gb|ADU72972.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 222

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 101/193 (52%), Gaps = 14/193 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V +F  G+V+++  T + R+  +  GK      I+ +++F   T  L+ + Y L F 
Sbjct: 24  QLAVLAFAFGMVIAMICTSILRYGPKLAGKC-----INAYVVFATNTPQLVQI-YFLFFA 77

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G         +SP F ++ I  +    A++ EI R+G  +V R ++EAA  LG + 
Sbjct: 78  LPEVGIL-------LSP-FTAVLIGATFNAGAYLCEIQRAGFDSVRRMEIEAAEVLGFSR 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+LP  ++ +  PL++Q++ +   +S+A   G  +L      + +QT  ++E  
Sbjct: 130 VQIIRYVILPHVIKVMFRPLSNQFIVMTLGTSMASMFGVEELTGRTYNLSSQTYLSVESF 189

Query: 368 LIWMFIYLSLSIM 380
            +   IY++++I+
Sbjct: 190 SVAAVIYIAITIV 202


>gi|239627706|ref|ZP_04670737.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239517852|gb|EEQ57718.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 267

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 23/134 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P++  + F+ FGL  L        L  D  + G  NFI               LS  
Sbjct: 80  RGTPMMAQAMFIYFGLLPL--------LGIDMSMWGAANFI---------------LSIN 116

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A++AE VR G++++  GQ E A ++G+TH +    V+LPQA+R+I+P + +  +  +K
Sbjct: 117 TGAYMAETVRGGILSIDPGQTEGAKSIGMTHVQTMIYVILPQALRNIMPQIGNNLIINIK 176

Query: 337 NSSLAVAVGFADLV 350
           +S +   +G  +L+
Sbjct: 177 DSCVLSVIGVTELL 190


>gi|158424110|ref|YP_001525402.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330999|dbj|BAF88484.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 227

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 64/105 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F  L++ LS   AAF  E+  +G+++V +GQ EA    GLT  +  R ++LPQA+R  
Sbjct: 95  PSFAVLWLVLSLVLAAFAEEVFWAGIVSVRKGQWEAGRCTGLTEFQTLRYIVLPQAIRLT 154

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +PPLT++ + + KN++L   +G  ++++   T  + +G A  +++
Sbjct: 155 VPPLTNRTIAITKNTALGTVIGVPEILNQATTAQSFSGSATPLMM 199


>gi|148983987|ref|ZP_01817306.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|225856306|ref|YP_002737817.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|147924134|gb|EDK75246.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|225724961|gb|ACO20813.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|301799653|emb|CBW32213.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae OXC141]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|15596086|ref|NP_249580.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PAO1]
 gi|107100347|ref|ZP_01364265.1| hypothetical protein PaerPA_01001372 [Pseudomonas aeruginosa PACS2]
 gi|116048813|ref|YP_792387.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218893142|ref|YP_002442011.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           LESB58]
 gi|254239242|ref|ZP_04932565.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           C3719]
 gi|254245176|ref|ZP_04938498.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           2192]
 gi|296390757|ref|ZP_06880232.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PAb1]
 gi|313105772|ref|ZP_07792035.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           39016]
 gi|9946789|gb|AAG04278.1|AE004523_6 arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PAO1]
 gi|115584034|gb|ABJ10049.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126171173|gb|EAZ56684.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           C3719]
 gi|126198554|gb|EAZ62617.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           2192]
 gi|218773370|emb|CAW29182.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           LESB58]
 gi|310878537|gb|EFQ37131.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           39016]
          Length = 229

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +      L++  P LG  ++I    ++P F+S    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQGLLNWVAPQLGYDDYI---DLNP-FVSGVGTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA  A G++HR+    + +PQ +R  IP  T+ +L L+K ++L   VG
Sbjct: 114 RGAFMAIPKGQGEAGYAYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178


>gi|260891036|ref|ZP_05902299.1| polar amino acid uptake family ABC transporter, permease protein
           [Leptotrichia hofstadii F0254]
 gi|260859063|gb|EEX73563.1| polar amino acid uptake family ABC transporter, permease protein
           [Leptotrichia hofstadii F0254]
          Length = 237

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 15/178 (8%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       +GLP ++  I LKY  + D       N I      P  + +Y+A   
Sbjct: 68  RGTPLLVQIYLAYYGLPKILDYIHLKYGFNID------VNNI------PAIVFVYVAFIL 115

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             + +++E  R+ + +V +GQ+EAA+++G+T  +A R ++LPQA+    P   + +++L+
Sbjct: 116 NVSGYLSETFRAAIQSVDKGQVEAALSIGMTKWQAMRRIVLPQAIIITFPNFGNTFISLI 175

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K+SSLA  V   +++     II+ +G  I E  ++   IY  + I++   M  +  K+
Sbjct: 176 KDSSLAFTVSIVEMMG-KAKIISASGLDIFEAYIVVAGIYWVVCIIVEKVMGIVEKKL 232


>gi|149010775|ref|ZP_01832146.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147765256|gb|EDK72185.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|13488462|ref|NP_109469.1| ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14028216|dbj|BAB54808.1| ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 97/185 (52%), Gaps = 9/185 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G   P L +  FLI  + +  ++A  Y L+F  P  G    +G  TV        + L
Sbjct: 44  RRGGGAPGLAVR-FLIDFIRSTPVLAWLYFLYFVMPFYGIR--LGAMTVG------VMGL 94

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S Y + ++AE+ ++G+ A+P+GQ EAA AL L+ R     V+ PQ +R++  PL +  ++
Sbjct: 95  SLYYSGYLAEVFKAGIDAIPKGQQEAARALSLSRRDTVVFVIAPQMLRNVAAPLGNYVVS 154

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +LK +     +   +++     I ++T +  E + +   ++L+L++++A  + R+  ++ 
Sbjct: 155 ILKATPYLAILAVPEMLGRAFDIASETYRYAEPLTVAGILFLALALIVAYGVKRIEQRLL 214

Query: 394 LKEKK 398
              ++
Sbjct: 215 ASGRR 219


>gi|227522632|ref|ZP_03952681.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227090212|gb|EEI25524.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
          Length = 204

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 36/194 (18%)

Query: 193 SFVLGIVLSLFAT--RLSR----HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SF+  ++L LF T  ++SR    H+  +        +IS   + G+P LVL+ + Y    
Sbjct: 23  SFIGALILGLFLTLAQMSRFKLLHWSARA-------FIS--FMRGVPMLVLLFIIY---- 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F F  G+   P   +  IA +   +AF++E+ RS   AV RGQ EAA +LGL 
Sbjct: 70  -------FGF--GANALP---AAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLP 117

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R     V+ PQA R  IP L +  L+L K++SLA  +  +++      I       + I
Sbjct: 118 YRTVIAKVIFPQAFRIAIPALGNILLDLFKSTSLAAMITVSEMFMDAKIIAGAYQDYMSI 177

Query: 367 -----ILIWMFIYL 375
                I+ W F +L
Sbjct: 178 YIVMAIIYWFFCWL 191



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL GF  + +L     I A I+G  +   ++S  KL+ W  R ++   R +P LV++F +
Sbjct: 9   ILAGFPMSLYLTAISFIGALILGLFLTLAQMSRFKLLHWSARAFISFMRGVPMLVLLFII 68

Query: 149 Y 149
           Y
Sbjct: 69  Y 69


>gi|15900515|ref|NP_345119.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|111656912|ref|ZP_01407736.1| hypothetical protein SpneT_02001839 [Streptococcus pneumoniae
           TIGR4]
 gi|14972082|gb|AAK74759.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVTRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|15902576|ref|NP_358126.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|116516319|ref|YP_816030.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|182683538|ref|YP_001835285.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|303253932|ref|ZP_07340053.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|15458107|gb|AAK99336.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116076895|gb|ABJ54615.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|182628872|gb|ACB89820.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|301801476|emb|CBW34168.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae INV200]
 gi|302599108|gb|EFL66133.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|213691607|ref|YP_002322193.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523068|gb|ACJ51815.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457694|dbj|BAJ68315.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 225

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS YTAAF+ E +RSG+  VP GQ EAA ALGL   ++   ++LPQA R  + PL +  
Sbjct: 99  GLSLYTAAFVCESLRSGINTVPIGQAEAARALGLGFMQSATEIILPQAFRGSVAPLGNTL 158

Query: 332 LNLLKNSSLAVAVGFADLVS--VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + LLKNS++A A   A   S  +   I  +    I+I LI+   Y+ L I I +    L+
Sbjct: 159 IALLKNSTVAAAASVATETSSLMSEMIEFRPDVIIQIFLIFALGYVILIIPIGMLTTYLS 218

Query: 390 AKIALKE 396
            K+A++ 
Sbjct: 219 NKLAVRR 225


>gi|260438223|ref|ZP_05792039.1| amino acid ABC transporter, permease protein [Butyrivibrio
           crossotus DSM 2876]
 gi|292809415|gb|EFF68620.1| amino acid ABC transporter, permease protein [Butyrivibrio
           crossotus DSM 2876]
          Length = 228

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 19/186 (10%)

Query: 177 SFPTLTMDTNA------KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TF 227
            FP +    N       K+F+ + +  I L L  T  S      T K  PL YI+    +
Sbjct: 7   QFPVVVKALNTGFLQTLKLFIVTLIGAIPLGLIITFGS------TSKFPPLKYITKIFVW 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P  ++I L    +F   VL   N + G   S  FM+  +A     A + +EI R 
Sbjct: 61  IIRGTP--LMIQLLIIFYFPGLVLN--NPVWGGGESGRFMAAAVAFIINYACYFSEIYRG 116

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++P GQ EA + LG+   +    V L Q ++ I+PP++++ + L+K++SLA  +   
Sbjct: 117 GIESIPVGQDEAGLVLGMKKSQIFFKVKLKQMIKRIVPPMSNEIITLVKDTSLARIIALQ 176

Query: 348 DLVSVG 353
           +++  G
Sbjct: 177 EIIWAG 182


>gi|258620247|ref|ZP_05715286.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262164884|ref|ZP_06032622.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus
           VM223]
 gi|258587605|gb|EEW12315.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262027264|gb|EEY45931.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus
           VM223]
          Length = 229

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F+S  IALS   A++ ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R
Sbjct: 87  ISP-FISGVIALSLIFASYASQTLRGALKAVGRGQREAASALGIPPAHAFFRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P L +Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174


>gi|194397718|ref|YP_002037266.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194357385|gb|ACF55833.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
          Length = 219

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|167720786|ref|ZP_02404022.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei DM98]
          Length = 208

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 14/200 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMVLGLIVGLLVA-LVRIGSNRLLSAIAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G        ++ P    ++  L+    A+++E +R  ++ + RGQ  A+ +LGLTH
Sbjct: 77  LPDIG-------ISLDPTAAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAASHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIASTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNR 387
           L    IY  LS ++A    R
Sbjct: 189 LAAAAIYWVLSTLLARLQGR 208



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 12/96 (12%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F +Y  
Sbjct: 17  GAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFVVYYG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                 +PD       G+ L+       TLT++  A
Sbjct: 77  ------LPD------IGISLDPTAAGIFTLTLNAGA 100


>gi|300921107|ref|ZP_07137491.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300411958|gb|EFJ95268.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 238

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|292487348|ref|YP_003530220.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292898593|ref|YP_003537962.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198441|emb|CBJ45549.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552767|emb|CBA19812.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
 gi|312171454|emb|CBX79712.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 218

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+CYT+AF+ +I    + A+P+GQ EA   LGL   +    V+LPQ
Sbjct: 80  GLDLSP-WAAAALALTCYTSAFLLDIWYGSIKALPKGQWEACRCLGLGIGQTLFRVVLPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 ALRIGIAPTVGFAVQVVKGTALASIIGFIELTKAGTILNNVTYQPFKV 186


>gi|87309629|ref|ZP_01091763.1| amino acid ABC transporter, permease protein [Blastopirellula
           marina DSM 3645]
 gi|87287393|gb|EAQ79293.1| amino acid ABC transporter, permease protein [Blastopirellula
           marina DSM 3645]
          Length = 219

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 4/124 (3%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           SCYTA    E+ R+GL  VP+GQ  AA AL LT  +  R V+LPQA+  I+P L +  + 
Sbjct: 100 SCYTA----EVYRAGLNGVPQGQWIAAKALNLTTWQTYRHVVLPQAIPPILPALGNYLIA 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K++ L  A+   D++     + NQ+ +  E + I   I+L+LSI+  + ++ L  ++ 
Sbjct: 156 MFKDAPLLSAITVLDVLQRAKIVGNQSFRYQEPLTIVGIIFLTLSILSGVGVSWLKRRVE 215

Query: 394 LKEK 397
             + 
Sbjct: 216 ASQS 219


>gi|328957173|ref|YP_004374559.1| putative amino acid ABC transporter, membrane-spanning subunit
           [Carnobacterium sp. 17-4]
 gi|328673497|gb|AEB29543.1| putative amino acid ABC transporter, membrane-spanning subunit
           [Carnobacterium sp. 17-4]
          Length = 211

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G++++P+GQ EA   LG+      R +++PQ MR ++P + ++ + L+K+
Sbjct: 96  AAYYAEIFRGGILSIPKGQFEAIRVLGIGKINGFRKIIIPQVMRVVLPSVGNEVIALVKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SL   +G  +L+  G    N     I    +   IYL ++ ++ L +N +  K
Sbjct: 156 TSLIYILGIGELLRAGQIAANTYASLIPYAAVGA-IYLVVTGLVTLLLNAIEKK 208


>gi|310640486|ref|YP_003945244.1| amino acid abc transporter, permease protein [Paenibacillus
           polymyxa SC2]
 gi|309245436|gb|ADO55003.1| Amino acid ABC transporter, permease protein [Paenibacillus
           polymyxa SC2]
          Length = 219

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 79/143 (55%), Gaps = 7/143 (4%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV+G++  +  +T +       +A     AA+ AEI R G++++ +GQ EA+  LGL+  
Sbjct: 80  PVIGEYLVLDRTTAA------VLAFVLNYAAYFAEIFRGGMLSIDKGQYEASQVLGLSKS 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++PQ +R  +P +T++   L+K+++L  AV   +L+    T +N+    +  + 
Sbjct: 134 QTLIRVIVPQMVRIALPAVTNEATTLVKDTALLYAVAVPELLHFANTAVNRDFSIVPYV- 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           +   IYL +++++ +F   L  +
Sbjct: 193 VAAVIYLLMALVLTIFFRALEKR 215


>gi|167569999|ref|ZP_02362873.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia oklahomensis C6786]
          Length = 247

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R VLLPQA++ +
Sbjct: 94  PGLAAVVCALSLVGGAYLAHSVHAGIRAAGAGQWQAGLSLGLTRWQTVRYVLLPQAVKIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|160937964|ref|ZP_02085322.1| hypothetical protein CLOBOL_02858 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439190|gb|EDP16944.1| hypothetical protein CLOBOL_02858 [Clostridium bolteae ATCC
           BAA-613]
          Length = 267

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           Y  LS  T A++AE VR G++++  GQ E A A+G+TH +    V+LPQA+R+I+P + +
Sbjct: 110 YFILSINTGAYMAETVRGGILSIDPGQTEGAKAIGMTHVQTMLYVILPQALRNIMPQIGN 169

Query: 330 QYLNLLKNSSLAVAVGFADLV-----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
             +  +K+S +   +G  +L+     + G   +N     I +I I+  +  + S ++  +
Sbjct: 170 NLIINIKDSCVLSVIGVTELLYKTKAAAGALYMNFEAYTITMI-IYFIMTFTCSRILRWW 228

Query: 385 MNRLNA 390
            NR++ 
Sbjct: 229 ENRMDG 234


>gi|46190371|ref|ZP_00121566.2| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189438886|ref|YP_001953967.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|189427321|gb|ACD97469.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
          Length = 366

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|260441513|ref|ZP_05795329.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae DGI2]
 gi|291044876|ref|ZP_06570585.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291011770|gb|EFE03766.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 219

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 16/181 (8%)

Query: 228 LIFGLPTLVLIALKY-----------QLHFDKPVLGQ--FNFIGGSTVSPE---FMSLYI 271
           L+FGLP  V+ A +            +L  + P+L Q  F + G   +  +   F    I
Sbjct: 32  LLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVI 91

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL    A+++AE VR+ ++AVP+GQ+ A  A+GL+  +  R V LPQ     +P + +  
Sbjct: 92  ALVFLGASYMAEAVRADILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANI 151

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L L+K +S+   VG A+L+ V   +I    +  E + +    YL + + ++L   R+  +
Sbjct: 152 LFLMKETSVVSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENR 211

Query: 392 I 392
           +
Sbjct: 212 V 212


>gi|187732498|ref|YP_001880941.1| arginine transporter permease subunit ArtQ [Shigella boydii CDC
           3083-94]
 gi|187429490|gb|ACD08764.1| arginine ABC transporter, permease protein ArtQ [Shigella boydii
           CDC 3083-94]
 gi|320175302|gb|EFW50408.1| Arginine ABC transporter, permease protein ArtQ [Shigella
           dysenteriae CDC 74-1112]
 gi|320183198|gb|EFW58056.1| Arginine ABC transporter, permease protein ArtQ [Shigella flexneri
           CDC 796-83]
 gi|332097215|gb|EGJ02198.1| arginine transport system permease protein artQ [Shigella boydii
           3594-74]
          Length = 238

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|77465462|ref|YP_354965.1| ABC polar amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389880|gb|ABA81064.1| ABC polar amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 221

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G  +SP F ++ +A     +A+ AEI R+G+ +VP GQ EAA A GLT  +    V+LP
Sbjct: 87  AGLAISP-FAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHVVLP 145

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           QA+R+++P L S  + ++K +SLA  V  A+L+
Sbjct: 146 QAVRNVLPDLLSNTVEVVKLTSLASVVSLAELL 178


>gi|226330764|ref|ZP_03806282.1| hypothetical protein PROPEN_04684 [Proteus penneri ATCC 35198]
 gi|225201559|gb|EEG83913.1| hypothetical protein PROPEN_04684 [Proteus penneri ATCC 35198]
          Length = 234

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALKY- 242
           T   + + + ++G+VL++  T     +     KA   L      LI GLP ++++   Y 
Sbjct: 13  TTVTLAISALIIGLVLAMLFT----AWESARWKAFAFLGTCWVTLIRGLPEMLVVLFVYY 68

Query: 243 ------QLHFDKPVLG----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                  +  D   LG    Q +F  G T S  F    IALS   A++ ++ +R  L AV
Sbjct: 69  GTLQGVMMLMDGIDLGAFTLQIDF--GDTESLPFYCGVIALSLLYASYASQTLRGALKAV 126

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EA  ALG+         ++PQ  R  +P L +Q+L LLK+++L   +   DL+  
Sbjct: 127 PTGQWEAGQALGMGRITIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQ 186

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +I N+T +      I   IYL+++++    +  L  +    E+ 
Sbjct: 187 TQSIANRTQEPFTWYSIVALIYLAITLVSQYILKWLEMRTTRFERS 232


>gi|312970986|ref|ZP_07785165.1| arginine transport system permease protein artQ [Escherichia coli
           1827-70]
 gi|310336747|gb|EFQ01914.1| arginine transport system permease protein artQ [Escherichia coli
           1827-70]
 gi|323172171|gb|EFZ57809.1| arginine transport system permease protein artQ [Escherichia coli
           LT-68]
 gi|324116076|gb|EGC10000.1| inner membrane transport system [Escherichia coli E1167]
          Length = 226

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 43  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 98

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 99  LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 158

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 159 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 218

Query: 393 ALKEKK 398
              E++
Sbjct: 219 TRFERR 224


>gi|326382188|ref|ZP_08203880.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198918|gb|EGD56100.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 243

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P F  + +AL     A+ AE+VR  L AVP  Q+EAA+AL  + R+    V+ PQ
Sbjct: 82  GYQLDPVFCGI-LALGLNYGAYGAEVVRGALTAVPAAQVEAAVALNFSARQRLTRVVFPQ 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A   +IP L +  ++LLK ++ A  +   DL +    +   TG  +    + + IYL L+
Sbjct: 141 AWAMMIPSLGNLLIHLLKGTAFASFITLQDLTAGIVDLQKTTGDTLFSFGVGLVIYLILA 200

Query: 379 IMIALFMNRLNAK 391
            ++ L +N   A+
Sbjct: 201 YLVTLLINLAEAR 213


>gi|294679056|ref|YP_003579666.1| polar amino acid ABC transporter permease [Rhodobacter capsulatus
           SB 1003]
 gi|294477872|gb|ADE87259.1| polar amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 243

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 53/95 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S   A+S +  A  A+I+R+GL +V  GQ E A A G +  K   L+ LPQAM  IIP
Sbjct: 84  FWSCCAAISIWGGANGAQILRAGLTSVSAGQRETAAAFGFSPLKGLLLITLPQAMPVIIP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P  S    L++ +SL   VG  +L+  G  +I QT
Sbjct: 144 PYVSLLTALVQATSLGAVVGAQELLRSGQVVIEQT 178


>gi|221199371|ref|ZP_03572415.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD2M]
 gi|221205727|ref|ZP_03578742.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221211584|ref|ZP_03584563.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD1]
 gi|221168945|gb|EEE01413.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD1]
 gi|221174565|gb|EEE06997.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221180656|gb|EEE13059.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD2M]
          Length = 229

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 17/164 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFD 247
           SF+LG+V +  A +LSR+   +    +  +Y  T LI G+P LVL+     +++  L+  
Sbjct: 28  SFLLGLVGA--AAKLSRN---RIANGVGTVY--TTLIRGVPDLVLMLLLFYSIQIWLNMA 80

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              LG         + P F++  + L     A+  E  R   ++VPRGQ+EA  A G+T+
Sbjct: 81  TDALGWDQI----DIDP-FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTN 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            +    ++ PQ MR  +P + + +  L+K+++L   +G AD+V 
Sbjct: 136 WQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179


>gi|78355232|ref|YP_386681.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217637|gb|ABB36986.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 222

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 72/119 (60%), Gaps = 10/119 (8%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L Y         G F  +G +  +    +L + ++  +AA+ ++I R  + 
Sbjct: 64  GVPILVLMFLFY--------FGVFELLGLNLSAISATALVLGMT--SAAYQSQIFRGSIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A+P GQ++AA A+G++  +A R V+LPQA+R  +P  +++Y  +LK+S+LA  VG  D+
Sbjct: 114 ALPAGQLKAARAMGMSDSQAIRAVILPQALRLSLPGWSNEYSIILKDSALAYVVGAMDI 172


>gi|330882783|gb|EGH16932.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 217

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|307323373|ref|ZP_07602583.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306890862|gb|EFN21838.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 334

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 19/218 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFD 247
           + V  F+LGI L++   RLS      T   L +L      IF   P LV +   + +   
Sbjct: 94  VMVLGFLLGIPLAVM--RLS------TNPVLSILSWGYVWIFRSTPLLVQLLFWFNIGAL 145

Query: 248 KPVLG-------QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            P LG       QF  +    +    ++  I L+ + AA+ AE++R G+++V  GQ EAA
Sbjct: 146 YPTLGLGLPFGPQFVTVKTVNLLGPTLTAVIGLTLHEAAYAAEVIRGGILSVDSGQTEAA 205

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL  R+  R +++PQAMRSI+P   +  +  LK +S+   +   DL+     + NQ+
Sbjct: 206 QALGLGRRRTLRRIVIPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQS 265

Query: 361 GQAIEIILIWMFIYLSLSIMIA---LFMNRLNAKIALK 395
            Q I ++++    Y++++ +++    ++ R  A+ A +
Sbjct: 266 YQVIPLLMVATLWYIAVTTVLSAGQFYVERYYARGAAR 303


>gi|257866637|ref|ZP_05646290.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872847|ref|ZP_05652500.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257800595|gb|EEV29623.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257807011|gb|EEV35833.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 529

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 62/107 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV  GQ EAA A+G++H +    V+LPQ MR+I+P   ++ +
Sbjct: 394 VSINTGAYMSEIVRGGIFAVDDGQFEAAQAIGMSHWQTMIKVVLPQVMRNILPATGNEII 453

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             +K++++   +  ADL   G +      Q  +   I   IYL L+I
Sbjct: 454 INIKDTAVLSVISVADLFFQGTSAAGTNFQYFQTFAIIGVIYLVLTI 500


>gi|33592469|ref|NP_880113.1| putative amino-acid ABC transporter, permease protein [Bordetella
           pertussis Tohama I]
 gi|33601481|ref|NP_889041.1| putative amino-acid ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
 gi|33572115|emb|CAE41655.1| putative amino-acid ABC transporter, permease protein [Bordetella
           pertussis Tohama I]
 gi|33575917|emb|CAE32996.1| putative amino-acid ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
          Length = 226

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  +    A+ +E++R  + ++PRGQ EAA +L +T  +A R  +LPQA R  +PPL + 
Sbjct: 94  IGFTLNVGAYNSEVIRGAIESIPRGQWEAAYSLSMTRGQAMRRTVLPQAARVAVPPLANS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SLA  +   ++      I   T + + +      IYL  S  ++    RL  
Sbjct: 154 FIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSALSSLQVRLEK 213

Query: 391 K 391
           +
Sbjct: 214 R 214


>gi|259909373|ref|YP_002649729.1| Putative amino acid ABC transporter, permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|224964995|emb|CAX56523.1| Putative amino acid ABC transporter, permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|283479445|emb|CAY75361.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 221

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 59/102 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LG+T R+    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGMTRRQTFMRVVLPPALKRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V + +L      I ++T  + E+ L+   +YL+LSI
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLMYLALSI 203


>gi|190892981|ref|YP_001979523.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190698260|gb|ACE92345.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 230

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHF---------HEKTGKALPLLYISTFLIFG 231
           LT+     IFV S ++G   SLFA    R           ++   K +P++ +     +G
Sbjct: 20  LTLAMALVIFVLSTIIG---SLFAMVEYRRIPVLRQLVVAYKVAFKGVPMVVVIFLAYYG 76

Query: 232 LPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           LP+         L F   ++G ++N  G ST  P +++L +AL+   AAF AE+V+  L 
Sbjct: 77  LPS--------TLQFLTSLVGGEYN--GHST--PNWVTLIVALTACVAAFQAEVVKGALN 124

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +   GQ +AA +LG    +  R V+LPQ + + IP L + ++ ++K  SL  A+   D+ 
Sbjct: 125 SFDTGQADAAYSLGYRKSQLFRRVMLPQVVVAAIPDLANSFMVIMKALSLGFAIEVVDIF 184

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +            +E  L+ + IY+ ++  +    +R
Sbjct: 185 AQSQLTAALNFYYLEAFLVAVVIYMVIAYAVTQIADR 221


>gi|126667886|ref|ZP_01738852.1| amino acid ABC transproter, permease protein [Marinobacter sp.
           ELB17]
 gi|126627702|gb|EAZ98333.1| amino acid ABC transproter, permease protein [Marinobacter sp.
           ELB17]
          Length = 224

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A++AE +R+ +I V R Q EAA+++G+T+ +  R ++LPQA R  +P L + 
Sbjct: 97  MGLTLHFSAYMAESIRAAIIGVDRSQTEAALSIGMTNSQLMRRIILPQATRVALPTLMNY 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +++++K +SLA  +G  +L  +G T    +G
Sbjct: 157 FIDMIKATSLAFTLGVTEL--MGATQKEASG 185


>gi|187919539|ref|YP_001888570.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717977|gb|ACD19200.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 240

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259
           A +LSR    +T + +  +Y + F   G+P L++I   Y  +F    L    GQ     G
Sbjct: 45  AAKLSRF---RTLRVIGDIYTTVFR--GVPELLVI---YLFYFGGSTLVTSVGQLFGAEG 96

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P F+   +A+   + A+ AE+ RS ++AV RG++EAA ++G+      R +L+PQ 
Sbjct: 97  FVGVPPFVVGALAVGMISGAYQAEVYRSAVLAVSRGELEAARSIGMPTLTMARRILIPQV 156

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P + + +   LK+S+L    G A+L+         T Q     ++   +YL ++ 
Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLIMTS 216

Query: 380 MIALFMNRLNAKIALKEKK 398
           +     NR  A +    K+
Sbjct: 217 ISNRVFNRAEAHVGRSFKR 235


>gi|327440167|dbj|BAK16532.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 248

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 67/122 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F++  + +S  T A++AE VR G++++ +GQ EAA A+G+ H +    ++LPQ  R+I
Sbjct: 99  DRFLAASVVISLNTGAYMAEYVRGGIVSIDKGQFEAAQAIGMNHLQTMIHIVLPQVARNI 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   +Q++  +K+SS+   +   +L     +I     + IE   I   +Y  ++  +  
Sbjct: 159 LPATGNQFVMNIKDSSVLSVISVVELFFTANSIAGSNYKYIEAFFIATILYFIMTFTVTR 218

Query: 384 FM 385
           F+
Sbjct: 219 FL 220


>gi|330939242|gb|EGH42645.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 225

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRQIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|298489316|ref|ZP_07007331.1| Arginine ABC transporter, permease protein ArtQ [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156167|gb|EFH97272.1| Arginine ABC transporter, permease protein ArtQ [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 231

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 23/180 (12%)

Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY-----QLH-----FDKPVLGQFNFIGGS 260
           KT    PL ++ ST+  L+ G+P L+ + L Y      +H     FD P L    F  G 
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMHALGKLFDIPDLALSAFSAG- 99

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  
Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L + ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210


>gi|330877312|gb|EGH11461.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 242

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 224 ISTFLIFGLPTLVLIALK-YQLHFDKPVLG---QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T LI G+P LVL+ L  Y L     +L    ++ +I    ++P F +  I L     A
Sbjct: 65  IYTTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYI---EINP-FGAGVITLGFIYGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  +LK ++
Sbjct: 121 YFTETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVMLKATA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L   +G ADLV         T Q    +++   IYL
Sbjct: 181 LVSIIGLADLVKASQDAGKSTYQLFYFLVLAALIYL 216


>gi|306829072|ref|ZP_07462262.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304428158|gb|EFM31248.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 219

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|146311036|ref|YP_001176110.1| arginine transporter permease subunit ArtQ [Enterobacter sp. 638]
 gi|145317912|gb|ABP60059.1| L-arginine ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 238

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L         L F + PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTLNLGFAQIPVQMQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYSAYASQTLRGALKAVPIGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYVLKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|319938930|ref|ZP_08013294.1| inner membrane amino-acid ABC transporter permease YecS
           [Streptococcus anginosus 1_2_62CV]
 gi|319811980|gb|EFW08246.1| inner membrane amino-acid ABC transporter permease YecS
           [Streptococcus anginosus 1_2_62CV]
          Length = 213

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 55/92 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G++++P GQ EAA  L  T  +    ++LPQ ++ ++P + ++
Sbjct: 89  IAFTLNYAAYFAEIFRGGILSIPAGQYEAAKVLKFTPFQTIWFIILPQVVKVVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            + L+K++SL  A+G +DL+    T  N+   
Sbjct: 149 VMTLVKDTSLVYALGVSDLILASRTAANRDAS 180


>gi|99078017|ref|YP_611275.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99035155|gb|ABF62013.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 216

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 12/146 (8%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPE 265
           + R F      A   L+IS F   G P LV + L Y   +  P VLG    I G T +  
Sbjct: 35  VERVFQIPVLDAFVRLFISFFR--GTPLLVQLFLFY---YGLPQVLGFLGSIDGVTAT-- 87

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                + L+ + +A++AE +R+ ++ V R Q EAA A+G+T  +  R ++LPQA R   P
Sbjct: 88  ----IMGLTLHFSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQIILPQAARVAAP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            L + +++++K +SLA  +G  +L+ 
Sbjct: 144 TLVNYFIDMIKGTSLAFTLGVTELMG 169


>gi|33591940|ref|NP_879584.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
 gi|33599320|ref|NP_886880.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33571584|emb|CAE41073.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
 gi|33575366|emb|CAE30829.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 227

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 81/150 (54%), Gaps = 15/150 (10%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           ++LPL+ +   + F LP L    L++    ++P+      + G+T S      ++    +
Sbjct: 65  RSLPLVLVIFLIYFILPYL----LQWITQAERPI------VLGATGSA-----FVTFILF 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ +EI+R+G+ +V  GQ  A  ALGLTH +  R V+LPQA+R+++P L +Q + + +
Sbjct: 110 EAAYFSEIIRAGIGSVGPGQYAAGSALGLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQ 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            ++L   +   D +     I  +  + +E+
Sbjct: 170 ETALVYVLSLPDFLGAATKIAQRDNRLVEM 199



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  L  S      ++G L+   RL   + VAW   +YV +FR++P ++VIF +Y
Sbjct: 18  LTGLRFSLLLTLSSAAGGVVLGALLAIARLYGRRWVAWPAAIYVNLFRSLPLVLVIFLIY 77


>gi|16128830|ref|NP_415383.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112232|ref|NP_706742.1| arginine transporter permease subunit ArtQ [Shigella flexneri 2a
           str. 301]
 gi|26246885|ref|NP_752925.1| arginine transporter permease subunit ArtQ [Escherichia coli
           CFT073]
 gi|30062344|ref|NP_836515.1| arginine transporter permease subunit ArtQ [Shigella flexneri 2a
           str. 2457T]
 gi|74311406|ref|YP_309825.1| arginine transporter permease subunit ArtQ [Shigella sonnei Ss046]
 gi|82543350|ref|YP_407297.1| arginine transporter permease subunit ArtQ [Shigella boydii Sb227]
 gi|89107713|ref|AP_001493.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|110804859|ref|YP_688379.1| arginine transporter permease subunit ArtQ [Shigella flexneri 5
           str. 8401]
 gi|157157070|ref|YP_001462060.1| arginine transporter permease subunit ArtQ [Escherichia coli
           E24377A]
 gi|157160385|ref|YP_001457703.1| arginine transporter permease subunit ArtQ [Escherichia coli HS]
 gi|170020735|ref|YP_001725689.1| arginine transporter permease subunit ArtQ [Escherichia coli ATCC
           8739]
 gi|170080521|ref|YP_001729841.1| arginine ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170680675|ref|YP_001742970.1| arginine transporter permease subunit ArtQ [Escherichia coli
           SMS-3-5]
 gi|188493002|ref|ZP_03000272.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           53638]
 gi|191166206|ref|ZP_03028040.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           B7A]
 gi|193064495|ref|ZP_03045576.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E22]
 gi|194428219|ref|ZP_03060762.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           B171]
 gi|194438384|ref|ZP_03070474.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           101-1]
 gi|209918111|ref|YP_002292195.1| arginine transporter permease subunit ArtQ [Escherichia coli SE11]
 gi|215485993|ref|YP_002328424.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218553448|ref|YP_002386361.1| arginine transporter permease subunit ArtQ [Escherichia coli IAI1]
 gi|218694336|ref|YP_002402003.1| arginine transporter permease subunit ArtQ [Escherichia coli 55989]
 gi|218699238|ref|YP_002406867.1| arginine transporter permease subunit ArtQ [Escherichia coli IAI39]
 gi|227884174|ref|ZP_04001979.1| arginine transporter subunit [Escherichia coli 83972]
 gi|238900121|ref|YP_002925917.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|253774108|ref|YP_003036939.1| arginine transporter permease subunit ArtQ [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160977|ref|YP_003044085.1| arginine transporter permease ArtQ [Escherichia coli B str. REL606]
 gi|256021017|ref|ZP_05434882.1| arginine transporter permease subunit ArtQ [Shigella sp. D9]
 gi|256023511|ref|ZP_05437376.1| arginine transporter permease subunit ArtQ [Escherichia sp.
           4_1_40B]
 gi|260843113|ref|YP_003220891.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O103:H2 str. 12009]
 gi|260854154|ref|YP_003228045.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O26:H11 str. 11368]
 gi|260867035|ref|YP_003233437.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O111:H- str. 11128]
 gi|293414143|ref|ZP_06656792.1| arginine transporter permease subunit ArtQ [Escherichia coli B185]
 gi|293433160|ref|ZP_06661588.1| arginine transporter permease subunit ArtQ [Escherichia coli B088]
 gi|300817038|ref|ZP_07097257.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300824003|ref|ZP_07104125.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300902395|ref|ZP_07120378.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300924471|ref|ZP_07140441.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300929328|ref|ZP_07144802.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300947047|ref|ZP_07161269.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300957066|ref|ZP_07169311.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300993466|ref|ZP_07180408.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301027624|ref|ZP_07190945.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301051210|ref|ZP_07198039.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|301305366|ref|ZP_07211461.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301325870|ref|ZP_07219303.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301646302|ref|ZP_07246192.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307137490|ref|ZP_07496846.1| arginine transporter permease subunit ArtQ [Escherichia coli H736]
 gi|307311750|ref|ZP_07591390.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309795343|ref|ZP_07689761.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|312969071|ref|ZP_07783278.1| arginine transport system permease protein artQ [Escherichia coli
           2362-75]
 gi|331641383|ref|ZP_08342518.1| arginine transport system permease protein ArtQ [Escherichia coli
           H736]
 gi|331646130|ref|ZP_08347233.1| arginine transport system permease protein ArtQ [Escherichia coli
           M605]
 gi|331651880|ref|ZP_08352899.1| arginine transport system permease protein ArtQ [Escherichia coli
           M718]
 gi|331667236|ref|ZP_08368101.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA271]
 gi|331676650|ref|ZP_08377346.1| arginine transport system permease protein ArtQ [Escherichia coli
           H591]
 gi|331682371|ref|ZP_08382990.1| arginine transport system permease protein ArtQ [Escherichia coli
           H299]
 gi|83287906|sp|P0AE35|ARTQ_ECOL6 RecName: Full=Arginine ABC transporter permease protein ArtQ
 gi|83287907|sp|P0AE34|ARTQ_ECOLI RecName: Full=Arginine ABC transporter permease protein ArtQ
 gi|83287908|sp|P0AE36|ARTQ_SHIFL RecName: Full=Arginine ABC transporter permease protein ArtQ
 gi|26107285|gb|AAN79468.1|AE016758_72 Arginine transport system permease protein artQ [Escherichia coli
           CFT073]
 gi|1651395|dbj|BAA35576.1| arginine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1787087|gb|AAC73949.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24051079|gb|AAN42449.1| arginine 3rd transport system permease protein [Shigella flexneri
           2a str. 301]
 gi|30040589|gb|AAP16321.1| arginine 3rd transport system permease protein [Shigella flexneri
           2a str. 2457T]
 gi|73854883|gb|AAZ87590.1| arginine 3rd transport system permease protein [Shigella sonnei
           Ss046]
 gi|81244761|gb|ABB65469.1| arginine 3rd transport system permease protein [Shigella boydii
           Sb227]
 gi|110614407|gb|ABF03074.1| arginine 3rd transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|157066065|gb|ABV05320.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           HS]
 gi|157079100|gb|ABV18808.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E24377A]
 gi|169755663|gb|ACA78362.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169888356|gb|ACB02063.1| arginine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170518393|gb|ACB16571.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           SMS-3-5]
 gi|188488201|gb|EDU63304.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           53638]
 gi|190903815|gb|EDV63530.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           B7A]
 gi|192928957|gb|EDV82570.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E22]
 gi|194413779|gb|EDX30058.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           B171]
 gi|194422608|gb|EDX38605.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           101-1]
 gi|209911370|dbj|BAG76444.1| arginine ABC transporter permease component [Escherichia coli SE11]
 gi|215264065|emb|CAS08407.1| arginine 3rd transport system permease protein ArtQ; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|218351068|emb|CAU96772.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli 55989]
 gi|218360216|emb|CAQ97766.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli IAI1]
 gi|218369224|emb|CAR16979.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli IAI39]
 gi|222032591|emb|CAP75330.1| Arginine transport system permease protein artQ [Escherichia coli
           LF82]
 gi|227838926|gb|EEJ49392.1| arginine transporter subunit [Escherichia coli 83972]
 gi|238860008|gb|ACR62006.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|242376678|emb|CAQ31390.1| artQ, subunit of arginine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325152|gb|ACT29754.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972878|gb|ACT38549.1| arginine transporter subunit [Escherichia coli B str. REL606]
 gi|253977092|gb|ACT42762.1| arginine transporter subunit [Escherichia coli BL21(DE3)]
 gi|257752803|dbj|BAI24305.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O26:H11 str. 11368]
 gi|257758260|dbj|BAI29757.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O103:H2 str. 12009]
 gi|257763391|dbj|BAI34886.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O111:H- str. 11128]
 gi|260449991|gb|ACX40413.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177997|dbj|BAI54327.1| arginine ABC transporter permease component [Escherichia coli SE15]
 gi|281600185|gb|ADA73169.1| Arginine 3rd transport system permease protein [Shigella flexneri
           2002017]
 gi|291323979|gb|EFE63401.1| arginine transporter permease subunit ArtQ [Escherichia coli B088]
 gi|291434201|gb|EFF07174.1| arginine transporter permease subunit ArtQ [Escherichia coli B185]
 gi|299879260|gb|EFI87471.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300297117|gb|EFJ53502.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300316151|gb|EFJ65935.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300405542|gb|EFJ89080.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300406580|gb|EFJ90118.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300419356|gb|EFK02667.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300453330|gb|EFK16950.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300462747|gb|EFK26240.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300523514|gb|EFK44583.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300530390|gb|EFK51452.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300839384|gb|EFK67144.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300847384|gb|EFK75144.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301075459|gb|EFK90265.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306908305|gb|EFN38804.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307552705|gb|ADN45480.1| arginine transport system permease protein [Escherichia coli ABU
           83972]
 gi|308120993|gb|EFO58255.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|309701140|emb|CBJ00438.1| arginine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|312286473|gb|EFR14386.1| arginine transport system permease protein artQ [Escherichia coli
           2362-75]
 gi|312945379|gb|ADR26206.1| arginine transporter permease subunit ArtQ [Escherichia coli O83:H1
           str. NRG 857C]
 gi|313650231|gb|EFS14643.1| arginine transport system permease protein artQ [Shigella flexneri
           2a str. 2457T]
 gi|315060147|gb|ADT74474.1| arginine transporter subunit [Escherichia coli W]
 gi|315135511|dbj|BAJ42670.1| arginine transporter permease subunit ArtQ [Escherichia coli DH1]
 gi|315257898|gb|EFU37866.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315292537|gb|EFU51889.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315619869|gb|EFV00388.1| arginine transport system permease protein artQ [Escherichia coli
           3431]
 gi|320199097|gb|EFW73694.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           EC4100B]
 gi|323155764|gb|EFZ41933.1| arginine transport system permease protein artQ [Escherichia coli
           EPECa14]
 gi|323159684|gb|EFZ45663.1| arginine transport system permease protein artQ [Escherichia coli
           E128010]
 gi|323165795|gb|EFZ51581.1| arginine transport system permease protein artQ [Shigella sonnei
           53G]
 gi|323175516|gb|EFZ61111.1| arginine transport system permease protein artQ [Escherichia coli
           1180]
 gi|323185174|gb|EFZ70539.1| arginine transport system permease protein artQ [Escherichia coli
           1357]
 gi|323190684|gb|EFZ75953.1| arginine transport system permease protein artQ [Escherichia coli
           RN587/1]
 gi|323379295|gb|ADX51563.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323937969|gb|EGB34231.1| inner membrane transport system [Escherichia coli E1520]
 gi|323942779|gb|EGB38944.1| inner membrane transport system [Escherichia coli E482]
 gi|323947114|gb|EGB43125.1| inner membrane transport system [Escherichia coli H120]
 gi|323962975|gb|EGB58547.1| inner membrane transport system [Escherichia coli H489]
 gi|323969574|gb|EGB64862.1| inner membrane transport system [Escherichia coli TA007]
 gi|324015940|gb|EGB85159.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|331038181|gb|EGI10401.1| arginine transport system permease protein ArtQ [Escherichia coli
           H736]
 gi|331044882|gb|EGI17009.1| arginine transport system permease protein ArtQ [Escherichia coli
           M605]
 gi|331050158|gb|EGI22216.1| arginine transport system permease protein ArtQ [Escherichia coli
           M718]
 gi|331065592|gb|EGI37485.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA271]
 gi|331075339|gb|EGI46637.1| arginine transport system permease protein ArtQ [Escherichia coli
           H591]
 gi|331080002|gb|EGI51181.1| arginine transport system permease protein ArtQ [Escherichia coli
           H299]
 gi|332104596|gb|EGJ07942.1| arginine transporter permease subunit ArtQ [Shigella sp. D9]
          Length = 238

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|260583461|ref|ZP_05851209.1| amino acid ABC transporter amino acid-binding/permease
           [Granulicatella elegans ATCC 700633]
 gi|260158087|gb|EEW93155.1| amino acid ABC transporter amino acid-binding/permease
           [Granulicatella elegans ATCC 700633]
          Length = 257

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +   F +++I +S  T A+++EIVR G+I++ +GQ EAA A+G+TH +    V+ PQ
Sbjct: 95  GIDMDRTFAAIFI-VSINTGAYMSEIVRGGIISIDKGQFEAAQAIGMTHTQTMMNVVFPQ 153

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            +R+I+P   ++++  +K++S+   +  ++L     T+     +  E   + + +Y  ++
Sbjct: 154 VIRNILPATGNEFVINIKDTSVLNVISVSELYFATKTVAGANFRYFETFFVTLILYFIMT 213


>gi|260222061|emb|CBA31249.1| hypothetical protein Csp_C27600 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 226

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 11/197 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+       V   V G+VL+  A +LSRH   +   A     + T ++ G+P  +++ +
Sbjct: 17  MTVQLACAALVCGLVFGLVLA--ACQLSRHAWLRRPVA-----VLTGVLRGVPEFLVVLV 69

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F    L   +F     +SP F  + ++L+    A+ +E+ R   +A+ RGQ+EAA
Sbjct: 70  CY---FGLSNLINNHFDSAFDISPFFAGV-VSLALVLGAYASEVFRGSFVALERGQLEAA 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +   LV LPQA R  I  L + + +LLK++SL   VG  DL+         +
Sbjct: 126 RSLGLSPVQTFFLVRLPQAWRIAILSLGNLWQSLLKDTSLVSVVGLEDLLKKSNMAAQAS 185

Query: 361 GQAIEIILIWMFIYLSL 377
            Q    ++    +Y  L
Sbjct: 186 HQPFLFLMAAAVMYFCL 202


>gi|311107043|ref|YP_003979896.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 12 [Achromobacter
           xylosoxidans A8]
 gi|310761732|gb|ADP17181.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 12
           [Achromobacter xylosoxidans A8]
          Length = 227

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 68/126 (53%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S +I    + AA+ +EI+R+G+ +V  GQ  A  ALGL H +  R V+LPQA R+++P L
Sbjct: 101 SAFITFILFEAAYFSEIIRAGVGSVGPGQYAAGSALGLRHGQVLRKVILPQAFRNMLPVL 160

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + + + ++L   +   D +     I  +  + +E+ ++   ++  +S   +  +  
Sbjct: 161 LTQVIVIFQETALVYVLSLTDFLGAATKIAQRDNRLVEMYMLVALVFFVISFTASRGVRA 220

Query: 388 LNAKIA 393
           L A+I 
Sbjct: 221 LRARIG 226



 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +   ++GTL+   RL   +L AW   VYV +FR++P ++VIF +Y
Sbjct: 33  VGGVLLGTLLAVARLYGGRLAAWPATVYVNLFRSLPLVLVIFLIY 77


>gi|153011889|ref|YP_001373102.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563777|gb|ABS17273.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 222

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F  I    +SP F+S  IAL+ YT+A  +E  R+ L ++ + Q +A  ALGL+       
Sbjct: 79  FPIIFDVELSP-FISAVIALTLYTSAITSESFRAALGSIGQDQHDACKALGLSRFSKMMY 137

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+ PQ +   IP L S  ++L K S+L  AVG  +L+     I N T + +E++     +
Sbjct: 138 VVAPQTIVRAIPNLMSNLVSLFKESALVSAVGVVELMYTAQNISNVTARPVEVLTTAALV 197

Query: 374 YLSLSIMIALFMNRLNAKIALK 395
           Y  +  ++   +N    ++ +K
Sbjct: 198 YFVIGWVLTRLVNAAETRLLVK 219



 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y  A+L G V T  +     + + + G L+G GR S  + V W C +YVEV R  P L+
Sbjct: 11  QYGPALLKGLVLTLQITVLCGLASVVFGFLIGVGRKSNVRPVRWACSLYVEVLRGTPVLI 70

Query: 144 VIFFLY 149
            +F+++
Sbjct: 71  TLFWVF 76


>gi|186471955|ref|YP_001863273.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184198264|gb|ACC76227.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 246

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 30/197 (15%)

Query: 197 GIVLSLFATRLSRHFHEKT----GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           GI LS+  TR + H    T     +A+P+L +  +  F +P L        LH D P L 
Sbjct: 48  GIALSM--TRGATHLALVTIVGFFRAIPVLMLIFWTFFLMPML--------LHVDVPGLA 97

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                          ++  AL+    A+++  V++G+ AV  GQ +AA +LGLT  +  R
Sbjct: 98  ---------------AVVCALALVGGAYLSHSVQAGIAAVGAGQRQAAASLGLTCWQTLR 142

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371
            VLLPQA+R + P   +Q+++L K++SLA  VG  +   +   + N+     ++I L   
Sbjct: 143 YVLLPQAVRIMTPSFVNQWVSLTKDTSLAYIVGVPEFTFLANQVNNRLMVYPVQIFLFVG 202

Query: 372 FIYLSLSIMIALFMNRL 388
            +YL L   +     RL
Sbjct: 203 LVYLLLCSALQFVATRL 219


>gi|266622948|ref|ZP_06115883.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288865281|gb|EFC97579.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 216

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++P GQ EAA  LG +  +    ++ PQ M+ I+P +T++ + L+K+
Sbjct: 99  AAYFAEIYRSGIQSMPVGQYEAAKLLGYSKTQTFFRIIFPQVMKRILPSVTNEVITLVKD 158

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +   ++ +V   + +     I  +   +F Y+  ++++A+ M     ++
Sbjct: 159 TSLAFTISVLEMFAVAKALASSQTSLIPFVAAGLFYYI-FNLLVAVIMEYAEKRL 212


>gi|310766722|gb|ADP11672.1| Putative amino acid ABC transporter, permease protein [Erwinia sp.
           Ejp617]
          Length = 221

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 59/102 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LG+T R+    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGMTRRQTFMRVVLPPALKRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V + +L      I ++T  + E+ L+   +YL+LSI
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLMYLALSI 203


>gi|296162379|ref|ZP_06845172.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295887412|gb|EFG67237.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 280

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 10/130 (7%)

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           + L A+ Y L F   V G        TV P   F+   + LS    A +AE +R G+ A+
Sbjct: 123 IALYAMLYLLPFYVAVFG--------TVIPFSPFVKAVVGLSLPVTANVAEAMRGGIEAI 174

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ E+A ALG    +  R ++LPQA+  ++P + + Y  L   +SLAV  G +D++SV
Sbjct: 175 PSGQWESARALGYRKNQILRYIVLPQAIPLLMPNMMTVYAGLFIGTSLAVVTGTSDVLSV 234

Query: 353 GGTIINQTGQ 362
             TI    G 
Sbjct: 235 ANTITASDGS 244


>gi|258545834|ref|ZP_05706068.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258518850|gb|EEV87709.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 231

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 62/116 (53%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEIVR  +   P+G++EAA ALG+  R+    ++LP A R  +P   ++ + +L 
Sbjct: 112 TAAYTAEIVRGAIETTPKGEIEAAKALGMNRRQIQWRIILPGAARRALPAYGNEIIFMLH 171

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            S++A      D+  V  T+  +T +     L    IYL++++ I     R+  ++
Sbjct: 172 GSAIASTATLLDITGVANTLYTRTYEPFAPFLTAAVIYLAITLCIVGIFRRIEKRL 227


>gi|320324765|gb|EFW80839.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|121609113|ref|YP_996920.1| beta tubulin [Verminephrobacter eiseniae EF01-2]
 gi|121553753|gb|ABM57902.1| Beta tubulin, autoregulation binding site [Verminephrobacter
           eiseniae EF01-2]
          Length = 222

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 66/123 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ +E++R  L +VP GQ EAA+AL ++     R ++LPQA+ + +PP T+ 
Sbjct: 88  VGLGLHYGAYGSELLRGALHSVPNGQYEAALALNMSAATRMRRIVLPQALLNALPPATNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +SL   +  +DL      +   T +  EI  + + IY  L+  I+  M  +  
Sbjct: 148 MIELLKGTSLVSLITLSDLTFRARQLDESTFRTAEIFSLTLVIYFVLAQTISYAMRHVER 207

Query: 391 KIA 393
           ++ 
Sbjct: 208 RLG 210


>gi|330817216|ref|YP_004360921.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327369609|gb|AEA60965.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 218

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 20/187 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++     FV S ++G+  +L     +R     +G A  ++ +    I GLP +V +  
Sbjct: 19  VTVEITVCSFVLSTLIGLAFALMRVSPNRLL---SGGAAAVINV----IRGLPIIVQL-- 69

Query: 241 KYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            + ++F  P LG Q +          F +  I L    +A+ AE  R+G+ A+ RGQ+EA
Sbjct: 70  -FYIYFVLPDLGVQLS---------AFQAGCIGLGIAYSAYQAENFRAGIEAIDRGQIEA 119

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G+      R V+LPQA R  +PP  +  + +LK+SSLA  +  A++   G  I + 
Sbjct: 120 AQSIGMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQLIASS 179

Query: 360 TGQAIEI 366
           T Q + +
Sbjct: 180 TFQNMTV 186


>gi|329116585|ref|ZP_08245302.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus parauberis NCFD 2020]
 gi|326906990|gb|EGE53904.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus parauberis NCFD 2020]
          Length = 215

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 4/126 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEIVR GL  V  GQ EA ++ GL   +   L++ PQA+R ++P + SQ+
Sbjct: 87  SFTVFTSAALAEIVRGGLNGVDNGQTEAGLSQGLKPSQVFLLIVFPQAIRKMLPAIISQF 146

Query: 332 LNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNR 387
           + ++K++SL  +V    +L      ++ +  QA E+  ++     IY  ++ +I+    R
Sbjct: 147 VTVIKDTSLLYSVIAIQELFGKSQILMGKFFQAKEVFALYALVTGIYFIINFIISTLSRR 206

Query: 388 LNAKIA 393
           L  K A
Sbjct: 207 LAKKWA 212



 Score = 46.2 bits (108), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T IL GF  T +++F  +I +TI GT++   R   NKL   I  +Y+E  RN+P L+ IF
Sbjct: 11  TFILKGFALTLYISFVSIILSTIFGTILAIMRNGKNKLFKVISGIYIEFVRNVPNLLWIF 70

Query: 147 FLY 149
            ++
Sbjct: 71  IIF 73


>gi|319405907|emb|CBI79539.1| Glutamate/aspartate transport system permease protein gltK
           [Bartonella sp. AR 15-3]
          Length = 178

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 78/139 (56%), Gaps = 1/139 (0%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           FI G+++     S  I  + + AA+ AEI+R+G++++ +GQ  A  ALG+T+ +   +V+
Sbjct: 39  FIIGTSIGAN-KSALITFTAFEAAYFAEIMRAGILSISQGQKHAGQALGMTYWQNMSIVI 97

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA R+++P   +Q + L ++++L  A+    L++    + N  G   E  ++    Y 
Sbjct: 98  LPQAFRNMLPVFLTQIIILFQDTTLVYAISGNSLLNGFDIVSNNFGVKQEAYILAAIFYF 157

Query: 376 SLSIMIALFMNRLNAKIAL 394
            +   ++  ++ L  KI++
Sbjct: 158 VICFTLSQIVSFLQKKISI 176


>gi|315122675|ref|YP_004063164.1| general L-amino acid transport system permease protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313496077|gb|ADR52676.1| general L-amino acid transport system permease protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 386

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 54/82 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + ++ + +A+IAE+ R GL ++ +GQ EAA +LGL + +  R +++PQ ++ +IP + + 
Sbjct: 254 LGVAAFASAYIAEVFRGGLQSISKGQFEAANSLGLNYFQTMRFIIIPQTIKRVIPGIVNT 313

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
           ++ L K+S+L   +   D++ V
Sbjct: 314 FIGLFKDSTLISIINMFDILGV 335


>gi|302186712|ref|ZP_07263385.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|293409237|ref|ZP_06652813.1| arginine transporter permease subunit ArtQ [Escherichia coli B354]
 gi|331672401|ref|ZP_08373192.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA280]
 gi|284920715|emb|CBG33778.1| arginine ABC transporter, permease protein [Escherichia coli 042]
 gi|291469705|gb|EFF12189.1| arginine transporter permease subunit ArtQ [Escherichia coli B354]
 gi|331070596|gb|EGI41960.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA280]
          Length = 238

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|257485080|ref|ZP_05639121.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289625714|ref|ZP_06458668.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289646323|ref|ZP_06477666.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|289672939|ref|ZP_06493829.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
 gi|330869651|gb|EGH04360.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330890405|gb|EGH23066.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330982502|gb|EGH80605.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330987289|gb|EGH85392.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331010993|gb|EGH91049.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|187923718|ref|YP_001895360.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714912|gb|ACD16136.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 219

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 18/209 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +F  + G VL+L         H +    +  +Y+S  ++ G P LV I   + +++  P
Sbjct: 29  MIFGLIAGAVLALMGVS-----HNRVLNWIARIYVS--VMRGTPLLVQI---FVIYYGLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             G        ++ P    + IALS   AA+++E +R  ++ +  GQ  AA +LGL+ R+
Sbjct: 79  SFG-------ISLDPTPAGV-IALSANVAAYLSESMRGAILGIHNGQWLAAYSLGLSRRQ 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+R  +P +++  ++L+K++SL   +   +L+     II  T Q + + L 
Sbjct: 131 TLRYVIAPQALRIAVPSMSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +Y  L  ++         ++AL  + 
Sbjct: 191 AAAVYWVLCQVLESVQRWYERRLALPSRH 219



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T   A   MI   I G ++    +S N+++ WI R+YV V R  P LV IF +Y  
Sbjct: 17  GAVLTVKFAVLSMIFGLIAGAVLALMGVSHNRVLNWIARIYVSVMRGTPLLVQIFVIYYG 76

Query: 152 V----LSVLPIPDHSIVL 165
           +    +S+ P P   I L
Sbjct: 77  LPSFGISLDPTPAGVIAL 94


>gi|255527439|ref|ZP_05394312.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296187468|ref|ZP_06855863.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255508885|gb|EET85252.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296047990|gb|EFG87429.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 235

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 82/143 (57%), Gaps = 4/143 (2%)

Query: 259 GSTVSPEFMS-LYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           G  VSP  +S + IAL  +T   AA+++E +RS L +V +GQ+EAA ++G+T  +A R +
Sbjct: 90  GWKVSPNGISHISIALIAFTLNAAAYLSENIRSALSSVNKGQLEAAYSIGMTSFEAYRRI 149

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+ + +P  ++ ++ + K++SLA +V   ++++V         + +E  L    IY
Sbjct: 150 ILPQALVAALPNFSNVFIQITKDTSLAFSVMVVEIMAVSSVEAASGYKYLEAYLDAAIIY 209

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
             +  + A     L  ++ + +K
Sbjct: 210 FIVCYIFAKLFTALENRLKVYKK 232


>gi|257067919|ref|YP_003154174.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256558737|gb|ACU84584.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 219

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 66/121 (54%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  +   ++AE+ R+G+ +VP GQ EAA AL L   +  R V++PQA+R+ +P L +  +
Sbjct: 99  LGIHYTTYMAEVYRAGIDSVPTGQWEAATALSLPRVRTWRAVVVPQAIRNTLPALGNYAI 158

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++ K +   V +   +LV V     +   +  E I +   I+L+ S   +L + RL  K+
Sbjct: 159 SMFKETPFFVVIYIPELVRVAQQYGSSYFRYTEAITLAGLIFLAASYPTSLLIRRLEKKL 218

Query: 393 A 393
           A
Sbjct: 219 A 219


>gi|167841347|ref|ZP_02468031.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia thailandensis
           MSMB43]
          Length = 294

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 80/139 (57%), Gaps = 6/139 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 100 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRVRQATRIV-LPQAM 157

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 158 RAFLPVAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 217

Query: 378 SIMIALFMNRLNAKIALKE 396
             ++   + R  A+ A++ 
Sbjct: 218 LSIVQAQVERRYARGAVRH 236


>gi|163815177|ref|ZP_02206558.1| hypothetical protein COPEUT_01335 [Coprococcus eutactus ATCC 27759]
 gi|158449586|gb|EDP26581.1| hypothetical protein COPEUT_01335 [Coprococcus eutactus ATCC 27759]
          Length = 236

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 80/142 (56%), Gaps = 2/142 (1%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +GG     +   L   L+  + A+I+EI+R G+++V  GQME   A+GL+       +++
Sbjct: 96  VGGHMTGVQVAMLVFGLN--SGAYISEIMRGGILSVDPGQMEGGRAMGLSFSTTMLKIVI 153

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+++I+P L +++++L+K +S+   VG  DL      I + + + +   L+   IY+ 
Sbjct: 154 PQAVKNILPTLGNEFISLIKETSVVSFVGATDLYVAFNYIGSNSYEFMVPYLVMALIYIV 213

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           + ++I+L +  +   +   +++
Sbjct: 214 MVLLISLGIKLMERSLRKSDRR 235


>gi|240850318|ref|YP_002971711.1| amino acid ABC transporter, permease protein [Bartonella grahamii
           as4aup]
 gi|240267441|gb|ACS51029.1| amino acid ABC transporter, permease protein [Bartonella grahamii
           as4aup]
          Length = 240

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 5/187 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           K  KA+  L+ + F   GLP L+ + L Y       + V   FNF    +++  F++  +
Sbjct: 53  KMAKAMARLFSTVFR--GLPELLTLFLVYYGLQSLIQNVFDYFNFEIMFSINA-FVAGVL 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AAF  E+         +GQ EAA ALGL+       ++ PQ +R+ +P L++ +
Sbjct: 110 ALSMVLAAFSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRIVFPQLIRNALPGLSNNW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK++SL   +   DL+      +  T + +   L+   +YL  S +    +  L   
Sbjct: 170 LTLLKDTSLVSTIALVDLMRQTNLAVAATNKPMLFYLVACLLYLLFSAVFTAILRHLETY 229

Query: 392 IALKEKK 398
             + +KK
Sbjct: 230 TQIGDKK 236


>gi|212704551|ref|ZP_03312679.1| hypothetical protein DESPIG_02611 [Desulfovibrio piger ATCC 29098]
 gi|212671950|gb|EEB32433.1| hypothetical protein DESPIG_02611 [Desulfovibrio piger ATCC 29098]
          Length = 275

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 91/179 (50%), Gaps = 13/179 (7%)

Query: 216 GKALPLLYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           G AL    +  ++ F  G+P LVL+ L   L              G  + P  +S  + +
Sbjct: 84  GNALARRLVGLYVWFFRGVPILVLLFLSQGLFLSM----------GWILEPFLLSCLV-M 132

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
            C + A+ ++I R  + ++P+GQ++AA ALG+    A   ++LPQA+R  IP   +++  
Sbjct: 133 GCISTAYQSQIFRGAIESLPQGQLKAARALGMRDMTAITCIILPQALRLSIPGWANEFSI 192

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LLK+S++   +G  ++++    +  +T + +    +   IY  L++++   + RL  K+
Sbjct: 193 LLKDSAVCYLLGTMEIMARVNAVAQRTHEHLAFFALAGVIYFVLTLIVLKLLRRLENKV 251


>gi|220925011|ref|YP_002500313.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219949618|gb|ACL60010.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 238

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 9/155 (5%)

Query: 227 FLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+  G P LV + L Y    Q  +    LG + F       P + +L +ALS  T A+ A
Sbjct: 59  FVFRGTPLLVQLFLIYYGLGQFRYGLQALGLWWFF----REPYWCAL-LALSLNTGAYTA 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R G++AVP G + A  A G++     R V LP A R  +P   ++ ++++K ++LA 
Sbjct: 114 EIFRGGVLAVPHGALLAGRACGMSRLTLLRRVTLPLAARQALPAYGNEIISVVKATALAS 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +   +L  +   +I Q+ +A+EI L     YL++
Sbjct: 174 TITILELTGIAQKLIAQSFRALEIFLCAAAFYLAI 208


>gi|322369616|ref|ZP_08044180.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haladaptatus paucihalophilus DX253]
 gi|320550786|gb|EFW92436.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haladaptatus paucihalophilus DX253]
          Length = 272

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 74/128 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS   AA+  E ++ G+ ++P GQMEAA +LG+++  A R ++LPQA R+ +  + + 
Sbjct: 145 IGLSLNHAAYSGEAIKGGINSIPDGQMEAARSLGMSYISAMRKIILPQAFRNSLAAVGND 204

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SL   +  ++L+S+   + +    A   +++    YL++++ +   +  L  
Sbjct: 205 QIILVKDTSLLSVIAVSELISLFRNVNSNQFDAWTPLVLVAIAYLAITLPLGKLVRMLEE 264

Query: 391 KIALKEKK 398
           + A  E++
Sbjct: 265 RAAWGEQR 272


>gi|167041374|gb|ABZ06127.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_005K23]
          Length = 420

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 56/83 (67%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + + + IA++ + AA++AE++R GL A+P+GQ +A+ +LG+ + +   L++
Sbjct: 277 FLPDGTYMDKLVRVIIAITLFEAAYMAEVIRGGLQALPKGQYDASKSLGMGYWRMHLLII 336

Query: 316 LPQAMRSIIPPLTSQYLNLLKNS 338
           LPQA++  IP + + ++ L K++
Sbjct: 337 LPQALKITIPGIANTFIALFKDT 359


>gi|83746650|ref|ZP_00943699.1| Hypothetical Protein RRSL_03560 [Ralstonia solanacearum UW551]
 gi|207739615|ref|YP_002258008.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726603|gb|EAP73732.1| Hypothetical Protein RRSL_03560 [Ralstonia solanacearum UW551]
 gi|206592995|emb|CAQ59901.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 259

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 63/96 (65%), Gaps = 1/96 (1%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   AA+IA+ +++GL AV  GQ  AA+ALG++  +A   V+LPQA R +
Sbjct: 101 PETATVVTALATVGAAYIAQSMQAGLRAVGTGQRNAALALGMSPGQALLAVVLPQAWRIM 160

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +P + +Q+++ +K++SLA  VG  +L S   + +N 
Sbjct: 161 LPSVANQWVSTVKDTSLAYIVGVVEL-STAASQVNS 195


>gi|330969960|gb|EGH70026.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 197

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 75  SAYGAEIIRSALINVSQGQRDALRALDFGPINAFRRIILPQALPFMIPPMGNQLVELLKT 134

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 135 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 174


>gi|260575377|ref|ZP_05843376.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022297|gb|EEW25594.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 295

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 56/84 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S   A+  Y AAFIAEI+R+G+ AV  GQMEAA ALG+    A R V+LPQA+  +  
Sbjct: 165 FLSAAAAIGLYAAAFIAEIIRAGVNAVGTGQMEAAQALGMGWASAMRRVILPQALARVWA 224

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
           PL ++++ ++K S+LA  V   DL
Sbjct: 225 PLANEFILMIKFSALASLVSVPDL 248



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL+G   T  LA  G + A ++G  +G  R+  +     +  VYV + RNIPPLV +F  
Sbjct: 64  ILLGLFTTLRLALWGGVVALVVGLAIGLMRVVPSPTARTLAAVYVGLIRNIPPLVFLFIF 123

Query: 149 Y 149
           Y
Sbjct: 124 Y 124


>gi|296103153|ref|YP_003613299.1| arginine transporter permease subunit ArtQ [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057612|gb|ADF62350.1| arginine transporter permease subunit ArtQ [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 238

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L ++  + L+      PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTLNLGVVQIPVQMQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A+ ++ +R  L AVP+GQ E+  ALG++       +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYSAYASQTLRGALKAVPQGQWESGQALGMSKAAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|218133963|ref|ZP_03462767.1| hypothetical protein BACPEC_01852 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991338|gb|EEC57344.1| hypothetical protein BACPEC_01852 [Bacteroides pectinophilus ATCC
           43243]
          Length = 230

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 53/79 (67%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A++AE VR+G+ ++  GQ E A+ALG++  KA  +V++PQA R+IIP + + +L  LK
Sbjct: 98  TGAYMAETVRAGIKSIDVGQREGALALGMSPLKAMVVVIIPQAFRNIIPEMANMFLTNLK 157

Query: 337 NSSLAVAVGFADLVSVGGT 355
            +S+   +G ++L  V  T
Sbjct: 158 MTSVLNVIGVSELFLVAKT 176


>gi|42519234|ref|NP_965164.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41583522|gb|AAS09130.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|329667256|gb|AEB93204.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 20/213 (9%)

Query: 185 TNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           T+  I V S ++G+ L +LF   + R    +  K +  +Y+  F I  +PT+VL+ L Y 
Sbjct: 24  TSVWIAVLSLIIGLALGALFG--VLRTSKSRLVKVIFRIYLEFFRI--VPTVVLLFLFYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +  QFN    ++V    M++ IA + + +A  ++IVR  LI+VP+ Q E+ +AL
Sbjct: 80  I-----LPRQFNLNWPASV----MAV-IAFALWVSAEFSDIVRGALISVPKIQRESGLAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    VLLPQA +  +P   +    ++K +SL + +   D+++VG  I+    Q 
Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189

Query: 364 IEIILIWM-----FIYLSLSIMIALFMNRLNAK 391
               + W+     F+Y  +   ++L+  RL+ +
Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222



 Score = 42.7 bits (99), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T +L G   + W+A   +I    +G L G  R S ++LV  I R+Y+E FR +P +V++F
Sbjct: 16  TRLLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRIVPTVVLLF 75

Query: 147 FLY 149
             Y
Sbjct: 76  LFY 78


>gi|330950462|gb|EGH50722.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|331266848|ref|YP_004326478.1| ABC transporter membrane-spanning permease,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
 gi|326683520|emb|CBZ01138.1| ABC transporter membrane-spanning permease,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
          Length = 219

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSVQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|283784629|ref|YP_003364494.1| arginine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282948083|emb|CBG87648.1| arginine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 238

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R
Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKTAIFFRLVMPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++ 
Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLIS 219

Query: 382 ALFMNRLNAKIALKEKK 398
              + R++ +    E++
Sbjct: 220 QYILRRIDLRATRFERR 236


>gi|71735859|ref|YP_274486.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556412|gb|AAZ35623.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320328872|gb|EFW84871.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|121603938|ref|YP_981267.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120592907|gb|ABM36346.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 216

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 11/164 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G+P +V++   + L+F  P +G    I  S +    + L IA S Y A    E  R+
Sbjct: 61  LLRGIPIIVIL---FFLYFVMPDVG----ISLSALQAGILGLGIAYSAYQA----ENFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV  GQ+EAA A+G+      R V+LPQA++ ++PP  +  + +LK+SS A  +  A
Sbjct: 110 GIEAVDHGQVEAARAMGMGWGLMMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVA 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   G  I   T Q   +  +   IYL + + + L +  L  +
Sbjct: 170 ELALQGKMIATSTFQNATVFTLVALIYLVMCVPLILLVRHLEKR 213


>gi|171778289|ref|ZP_02919495.1| hypothetical protein STRINF_00337 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282989|gb|EDT48413.1| hypothetical protein STRINF_00337 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 242

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 53/84 (63%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           Y+     T   ++EI+RS ++ V +GQ+EAA+A+GLT ++A   ++ PQA+R  +P L +
Sbjct: 116 YVIFGLMTTGSLSEIIRSAILTVNKGQLEAALAIGLTAKQAYLRIVFPQAIRQALPNLCN 175

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
             +NL+K +SL   +   D+ ++ 
Sbjct: 176 LVINLVKGTSLVFVMTVKDITAIA 199


>gi|146305345|ref|YP_001185810.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145573546|gb|ABP83078.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 215

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++   AL+ +T+AF+AEI R  + ++ RGQ EA+ +L ++  +  R V+LPQ
Sbjct: 79  GVDVSP-WLAAATALTLFTSAFLAEIWRGCVESIGRGQWEASESLAMSRLETLRHVVLPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVIKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|29375693|ref|NP_814847.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227518372|ref|ZP_03948421.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227552901|ref|ZP_03982950.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229550389|ref|ZP_04439114.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293383316|ref|ZP_06629231.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|293387527|ref|ZP_06632076.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294780988|ref|ZP_06746340.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300859666|ref|ZP_07105754.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307268769|ref|ZP_07550137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307273808|ref|ZP_07555030.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307274581|ref|ZP_07555761.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307278847|ref|ZP_07559910.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307288578|ref|ZP_07568562.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312899592|ref|ZP_07758918.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312903650|ref|ZP_07762826.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312905823|ref|ZP_07764843.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312909122|ref|ZP_07767981.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312951369|ref|ZP_07770267.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|29343154|gb|AAO80917.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227074050|gb|EEI12013.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227177973|gb|EEI58945.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229304511|gb|EEN70507.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|291079339|gb|EFE16703.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|291083037|gb|EFE20000.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294451934|gb|EFG20384.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295112701|emb|CBL31338.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Enterococcus sp. 7L76]
 gi|300850484|gb|EFK78233.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306500485|gb|EFM69818.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504518|gb|EFM73725.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306508733|gb|EFM77823.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306509493|gb|EFM78541.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|306514897|gb|EFM83444.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310628162|gb|EFQ11445.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630629|gb|EFQ13912.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310633003|gb|EFQ16286.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311290546|gb|EFQ69102.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311293271|gb|EFQ71827.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315028074|gb|EFT40006.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315031595|gb|EFT43527.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034963|gb|EFT46895.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315148454|gb|EFT92470.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315150403|gb|EFT94419.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153640|gb|EFT97656.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315156542|gb|EFU00559.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315158368|gb|EFU02385.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315160939|gb|EFU04956.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315165528|gb|EFU09545.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315170968|gb|EFU14985.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315573709|gb|EFU85900.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315577478|gb|EFU89669.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|315582676|gb|EFU94867.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|327534748|gb|AEA93582.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
 gi|329576392|gb|EGG57905.1| putative glutamine ABC transporter permease protein GlnP
           [Enterococcus faecalis TX1467]
          Length = 221

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A +AEI+R GL  V +GQ+EAA + G ++ +    ++LPQA+R+++P + SQ
Sbjct: 92  VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K++S L   +   +L      ++    QTGQ   I  I   IY  ++  I+ F  
Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211

Query: 387 RLNAKIA 393
            L+   A
Sbjct: 212 WLSRNWA 218



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150
           T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+   VIF ++K
Sbjct: 26  TLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 83


>gi|107023049|ref|YP_621376.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686710|ref|YP_839957.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170735479|ref|YP_001774593.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|105893238|gb|ABF76403.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652425|gb|ABK13064.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169821517|gb|ACA96098.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 228

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 24/139 (17%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP L        +H D                 E+ +  +A++    A+  EIVR
Sbjct: 78  FIFFGLPAL-------GVHID-----------------EYTAAILAMTLNLGAYSVEIVR 113

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP+G +EAA AL ++  +  R V+LPQA+  + P L+SQ +  +  S++   +  
Sbjct: 114 AGVAAVPKGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISV 173

Query: 347 ADLVSVGGTIINQTGQAIE 365
           ADL      I ++  +A E
Sbjct: 174 ADLTYAASYIQSRNFRAFE 192


>gi|315168385|gb|EFU12402.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
          Length = 221

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A +AEI+R GL  V +GQ+EAA + G ++ +    ++LPQA+R+++P + SQ
Sbjct: 92  VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K++S L   +   +L      ++    QTGQ   I  I   IY  ++  I+ F  
Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211

Query: 387 RLNAKIA 393
            L+   A
Sbjct: 212 WLSRNWA 218



 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150
           T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+   VIF ++K
Sbjct: 26  TLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 83


>gi|255973160|ref|ZP_05423746.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|255976203|ref|ZP_05426789.1| amino acid ABC transporter permease [Enterococcus faecalis T2]
 gi|256618701|ref|ZP_05475547.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ATCC 4200]
 gi|256762125|ref|ZP_05502705.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256958614|ref|ZP_05562785.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis DS5]
 gi|256962287|ref|ZP_05566458.1| amino acid ABC transporter permease [Enterococcus faecalis Merz96]
 gi|256965482|ref|ZP_05569653.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704]
 gi|257078032|ref|ZP_05572393.1| amino acid ABC transporter permease [Enterococcus faecalis JH1]
 gi|257085622|ref|ZP_05579983.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis Fly1]
 gi|257086472|ref|ZP_05580833.1| amino acid ABC transporter permease [Enterococcus faecalis D6]
 gi|257089529|ref|ZP_05583890.1| ABC polar amino acid transporter permease [Enterococcus faecalis
           CH188]
 gi|257415731|ref|ZP_05592725.1| amino acid ABC transporter permease [Enterococcus faecalis AR01/DG]
 gi|257422966|ref|ZP_05599956.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|255964178|gb|EET96654.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|255969075|gb|EET99697.1| amino acid ABC transporter permease [Enterococcus faecalis T2]
 gi|256598228|gb|EEU17404.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ATCC 4200]
 gi|256683376|gb|EEU23071.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256949110|gb|EEU65742.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis DS5]
 gi|256952783|gb|EEU69415.1| amino acid ABC transporter permease [Enterococcus faecalis Merz96]
 gi|256955978|gb|EEU72610.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704]
 gi|256986062|gb|EEU73364.1| amino acid ABC transporter permease [Enterococcus faecalis JH1]
 gi|256993652|gb|EEU80954.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis Fly1]
 gi|256994502|gb|EEU81804.1| amino acid ABC transporter permease [Enterococcus faecalis D6]
 gi|256998341|gb|EEU84861.1| ABC polar amino acid transporter permease [Enterococcus faecalis
           CH188]
 gi|257157559|gb|EEU87519.1| amino acid ABC transporter permease [Enterococcus faecalis ARO1/DG]
 gi|257164790|gb|EEU94750.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|323480356|gb|ADX79795.1| ABC transporter, permease protein [Enterococcus faecalis 62]
          Length = 215

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A +AEI+R GL  V +GQ+EAA + G ++ +    ++LPQA+R+++P + SQ
Sbjct: 86  VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 145

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K++S L   +   +L      ++    QTGQ   I  I   IY  ++  I+ F  
Sbjct: 146 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 205

Query: 387 RLNAKIA 393
            L+   A
Sbjct: 206 WLSRNWA 212



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150
           T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+   VIF ++K
Sbjct: 20  TLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 77


>gi|116326668|ref|YP_796442.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|116106486|gb|ABJ71627.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
          Length = 229

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 32/221 (14%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+   A   +   +LGI+L +      R F  +  + +  LY+  F I  +PT+VL+ L
Sbjct: 24  VTVKIAAVALIVGLILGIILGVL-----RTFKNRPLRVVLRLYLEFFRI--VPTVVLLFL 76

Query: 241 KY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            Y     QL+F+ P               +  +L  AL  + AA +++IVR  L +VP+ 
Sbjct: 77  FYYILPRQLNFNLP-------------GDQLATLVFAL--WVAAEMSDIVRGALSSVPQH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  A+GL   +  R VL+PQA+   IP   +    ++K +SL + +   D++++G  
Sbjct: 122 QRESGKAIGLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQ 181

Query: 356 IINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391
           II          + W++      Y  +   ++ +  RL  K
Sbjct: 182 IIEANNHTHPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKK 222


>gi|116255414|ref|YP_771247.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260062|emb|CAK03161.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 234

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF FI  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA ++G++
Sbjct: 76  LGQFGFIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT + +E+
Sbjct: 136 GFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195

Query: 367 ILIWMFIYLSLSIMI 381
            L    IYL L+ +I
Sbjct: 196 FLCAAIIYLVLNFII 210


>gi|116254798|ref|YP_770634.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259446|emb|CAK10584.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 222

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 59/107 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS Y AA+ +EI RSG  AVP+G +EA I +GLT  +  R +LLP+    ++PP  + 
Sbjct: 93  IGLSIYGAAYFSEIFRSGFAAVPKGHIEAGICVGLTQGQIIRRILLPEMTMLVLPPSVNM 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            + L+K +++   +   +L +    I +Q    +E + +    Y +L
Sbjct: 153 TVILMKETAVLSIITVPELTATLSAIGSQQYAFVEALFVLALFYWAL 199


>gi|23464652|ref|NP_695255.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           longum NCC2705]
 gi|23325211|gb|AAN23891.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           longum NCC2705]
          Length = 366

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|310779669|ref|YP_003968002.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309748992|gb|ADO83654.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 281

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 18/182 (9%)

Query: 219 LPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS--TVSPEFMSLYIAL 273
           LP+ Y S F    I G P +V I L             F ++ G+   ++  ++   + +
Sbjct: 112 LPVYYFSKFYVEFIRGTPLIVQIYL-------------FFYVVGTAFNITDRYIMGILIM 158

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + ++ A++AEI+RSG+ ++   Q+E A AL  T  +    ++LPQ ++ I PPL  Q+ +
Sbjct: 159 ASFSGAYVAEIIRSGIESISASQLETAKALAFTPFQTYVYIILPQVVKRITPPLAGQFAS 218

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K+SSL   +   +       + + T   +E   I    YL L+  I+ +   L  K +
Sbjct: 219 LIKDSSLLSIIAVNEFTKNVQEVDSLTFAPVENYFILAVGYLLLTYPISHYSKYLERKFS 278

Query: 394 LK 395
            +
Sbjct: 279 YE 280


>gi|256831908|ref|YP_003160635.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Jonesia denitrificans DSM 20603]
 gi|256685439|gb|ACV08332.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Jonesia denitrificans DSM 20603]
          Length = 218

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 67/116 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A ++AE+ R+G+ +VP+GQ EA  AL ++  +    V++PQA+R+ +P L +  +++ K+
Sbjct: 100 ATYMAEVYRAGIDSVPQGQWEATTALSMSRARTWIAVIIPQAVRATVPALGNYVISMFKD 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   +A+   ++V    T        IE I +   I+L+ S   +L ++RL  ++A
Sbjct: 160 TPFLIAITVTEIVRAAQTYGGNHFTYIEAITLTGVIFLASSYPTSLLISRLEKRLA 215


>gi|227546751|ref|ZP_03976800.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|322689655|ref|YP_004209389.1| glutamate ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|227212713|gb|EEI80594.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|320460991|dbj|BAJ71611.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 366

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|209518060|ref|ZP_03266890.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501466|gb|EEA01492.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 240

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 12/199 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259
           A +LSRH   ++ + +   Y + F   G+P L++I   Y  +F    L    GQ+    G
Sbjct: 45  AAKLSRH---RSLRVIGDFYTTVFR--GVPELLVI---YLFYFGGSTLLTTVGQWFGAEG 96

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P F    +A+   + A+ AE+ RS ++AV +G++EAA A G+      R +L+PQ 
Sbjct: 97  FVGVPPFAIGALAVGMISGAYQAEVYRSAVLAVSKGELEAARATGMHTLLVARRILIPQV 156

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P + + +   LK+S+L    G A+L+         T Q +    +   IYL ++ 
Sbjct: 157 LRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAAGSTHQYLTFFAVGGAIYLVMTG 216

Query: 380 MIALFMNRLNAKIALKEKK 398
           +     N   A++    K+
Sbjct: 217 ISNRVFNHAEARVGRSFKR 235


>gi|182435532|ref|YP_001823251.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326776169|ref|ZP_08235434.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178464048|dbj|BAG18568.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326656502|gb|EGE41348.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 313

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 57/93 (61%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +L   LS Y     AE++R+G+ +VP+GQ EAA ALG++  +    VL+PQA+RS++P +
Sbjct: 134 ALAAGLSVYNGCVQAEVLRAGINSVPKGQSEAAYALGMSKTQVMVSVLMPQAVRSMLPTI 193

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             Q +  LK++SL   + + +L+     I + T
Sbjct: 194 IGQLVVTLKDTSLGFIILYPELLQTARLIASNT 226


>gi|241113571|ref|YP_002973406.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861779|gb|ACS59445.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + A + AE+ R+G+  VPRGQ EAA A  LT R+A   V+LPQA+  +IP L + 
Sbjct: 93  IGMGIHYATYTAEVYRAGIENVPRGQWEAAKATNLTTRQAWIHVILPQAIPPMIPALANY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           ++ + K + L  A+   +L++   +I N   + IE
Sbjct: 153 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIE 187


>gi|183601788|ref|ZP_02963158.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683682|ref|YP_002470065.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190714|ref|YP_002968108.1| glutamate ABC transporter permease [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196120|ref|YP_002969675.1| glutamate ABC transporter permease [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183219394|gb|EDT90035.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219621332|gb|ACL29489.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240249106|gb|ACS46046.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250674|gb|ACS47613.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|289178452|gb|ADC85698.1| GluD [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295793703|gb|ADG33238.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 363

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ I+L  Y  + +AE++RSG+  +P GQ EAA+ALG+T  ++   + +PQA+ +
Sbjct: 142 SPSYWAVVISLVFYNGSVVAELIRSGVGNLPGGQHEAAVALGMTRTQSLMSIEVPQAIYA 201

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 202 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 230



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 39/74 (52%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P     +++   L G   T   AF  +I + + G + G GRL  +++V  IC + +E  R
Sbjct: 61  PALDGEAWSDFYLPGLWATLRAAFLAVIGSVVFGLVFGIGRLLPSRIVQGICAIVIEFCR 120

Query: 138 NIPPLVVIFFLYKS 151
            +P L+++ F +++
Sbjct: 121 AVPVLIMMIFFWRA 134


>gi|154497089|ref|ZP_02035785.1| hypothetical protein BACCAP_01382 [Bacteroides capillosus ATCC
           29799]
 gi|150273488|gb|EDN00616.1| hypothetical protein BACCAP_01382 [Bacteroides capillosus ATCC
           29799]
          Length = 182

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 96/193 (49%), Gaps = 17/193 (8%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RLSRH   +  +     YI   +I G+P +V + + Y            N +  +    +
Sbjct: 7   RLSRH---RILRGPATAYID--IIRGIPVVVQLLIMY------------NVVLLNVTDNK 49

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   IA    ++A++AEI RSG+ AV  GQMEA  +LGL+  +    ++ PQA+++ +P
Sbjct: 50  TLVAIIAFGLNSSAYMAEIYRSGINAVDPGQMEAGRSLGLSRAQTMWHIIFPQAIKNCLP 109

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             TS+++ L+K +++   +   DL  V  ++ + T  A   + I    Y +++  +++  
Sbjct: 110 TYTSEFIVLVKETAVVGYIALVDLTKVYSSVQSLTYDAAAPLFIIAVAYFAITKTLSIIF 169

Query: 386 NRLNAKIALKEKK 398
             +  ++   +++
Sbjct: 170 GYMERRLRESDRR 182


>gi|89096759|ref|ZP_01169651.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease protein [Bacillus sp. NRRL B-14911]
 gi|89088774|gb|EAR67883.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease protein [Bacillus sp. NRRL B-14911]
          Length = 243

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 68/122 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  T A++AEIVR G++++ +GQ EAA A+G+ H +    V+LPQ +R+I+P   + 
Sbjct: 106 IVVSINTGAYMAEIVRGGIVSIDKGQFEAAQAIGMNHYQTMWNVVLPQVIRNILPATGNH 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +  ++L  +  ++     +  E   +   IY  ++ ++   +     
Sbjct: 166 FVINIKDTSVLNVISVSELYFMTKSVAGNNFRYFESFFVACVIYFVMTFIVTRILRYFER 225

Query: 391 KI 392
           K+
Sbjct: 226 KL 227


>gi|116617492|ref|YP_817863.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096339|gb|ABJ61490.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 248

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T  I G P L+ + L Y   +  P+   +  I    VSP  + L+I      AAF++EI+
Sbjct: 61  TSFIRGTPILIQMFLVY---YGLPMFLGYVGINTDDVSP-LIYLFITYGLNMAAFLSEII 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+ L +VP  Q EAA+  G T R+    ++ PQA+   +P   +  ++LL+++SLA  +G
Sbjct: 117 RAALESVPASQREAALTSGYTKRQMYFKIIFPQAVIIAVPSFATMVISLLQDTSLAFTIG 176

Query: 346 FADLVSVGGTIINQTGQAIE 365
             D+V     +   T   +E
Sbjct: 177 VLDVVGKAKALGTATFHTVE 196


>gi|315144630|gb|EFT88646.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 221

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A +AEI+R GL  V +GQ+EAA + G ++ +    ++LPQA+R+++P + SQ
Sbjct: 92  VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K++S L   +   +L      ++    QTGQ   I  I   IY  ++  I+ F  
Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211

Query: 387 RLNAKIA 393
            L+   A
Sbjct: 212 WLSRNWA 218



 Score = 36.2 bits (82), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150
           T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+   VIF ++K
Sbjct: 26  TLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 83


>gi|189349963|ref|YP_001945591.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|189333985|dbj|BAG43055.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 229

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 111/234 (47%), Gaps = 12/234 (5%)

Query: 169 MFLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           MFL   G   P L   T    ++ V S    + L L    +++  H +  +A+   Y  T
Sbjct: 1   MFLYGFG---PVLWAGTVQTIELSVLSLATAVALGLIGA-VAKLSHNRVLRAIATGY--T 54

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEI 284
            LI  +P LVL+ L +  +  +  L QF + +G + +  + F++  + L     A+  E 
Sbjct: 55  TLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K ++L   +
Sbjct: 113 FRGAFLAVPRGQLEAGAAYGMSGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSII 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G AD+V         T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 173 GLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226


>gi|170695849|ref|ZP_02886990.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139273|gb|EDT07460.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 240

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 7/172 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           G+P L++I   Y  +F    L    GQ+    G    P F+   +A+   + A+ AE+ R
Sbjct: 67  GVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYR 123

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S ++AV RG++EAA ++G+      R +L+PQ +R  +P + + +   LK+S+L    G 
Sbjct: 124 SAVLAVSRGELEAARSIGMPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGL 183

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A+L+         T Q     ++   +YL ++ +     NR  A++    K+
Sbjct: 184 AELLRTSQVAAGSTHQYFTFFVVGGALYLLMTSISNRVFNRAEARVGRSFKR 235


>gi|317481689|ref|ZP_07940722.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916868|gb|EFV38257.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 366

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|323529255|ref|YP_004231407.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386257|gb|ADX58347.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 238

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 67/122 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A++AE+ R+G+ +VPRGQ+EAA  LGL   +    V+LPQA R++ P + + 
Sbjct: 93  IALGVNVGAYLAEVFRAGIQSVPRGQVEAASILGLERSQIFMEVVLPQAARAVYPAIVNN 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LL  +SL  A+   +L      I  +T   I+   I +  YL LS +++     + A
Sbjct: 153 LIQLLLGTSLLSAIALPELSGTATVINARTLLYIQTFTITLIAYLFLSNVLSWVAGLIGA 212

Query: 391 KI 392
           ++
Sbjct: 213 RM 214


>gi|227529474|ref|ZP_03959523.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus vaginalis ATCC
           49540]
 gi|227350559|gb|EEJ40850.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus vaginalis ATCC
           49540]
          Length = 231

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 100/199 (50%), Gaps = 2/199 (1%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF  G++++L  T L R  H++ G  + L +   F ++   +  L+   + + F  P L 
Sbjct: 27  SFFFGLIIAL-VTALIRLSHQR-GPFMILKWFVQFYVWLFRSTPLLVQLFIVFFGLPYLR 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               +        F +  I  S  T ++ +E +R+ + +V  GQ EA  A+G+T  +   
Sbjct: 85  IRGILPHGIKLEPFTAGIITFSLNTGSYASETIRAAISSVDHGQWEAGAAIGMTRLQILW 144

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +++PQA+R  +PPL++ +++L+K++SLA ++   ++  V   I     Q + +  +   
Sbjct: 145 RIIIPQALRVALPPLSNSFISLVKDTSLAASITIMEMFEVSQQIAAANYQPLLMYTLVAL 204

Query: 373 IYLSLSIMIALFMNRLNAK 391
           IY   + ++++  + L  +
Sbjct: 205 IYAVFTTVLSVLQHYLEKR 223


>gi|88800986|ref|ZP_01116536.1| ABC-type arginine/histidine transport system, permease component
           [Reinekea sp. MED297]
 gi|88776253|gb|EAR07478.1| ABC-type arginine/histidine transport system, permease component
           [Reinekea sp. MED297]
          Length = 233

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    IA    TAA+  EI R  + A PRG++EAA A G++  K  + ++LP A R  IP
Sbjct: 100 FYPCLIAFVLNTAAYTTEIFRGAIEATPRGEIEAAKAYGMSWGKRMKRIILPSAFRRAIP 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             +++ + +L  S++A  V  ADL++ G  I  +     +  +    +YL L+  I    
Sbjct: 160 AYSNEVVFMLHASAIASTVTIADLLNAGRMIYARYYAPFDGFIFAALVYLCLTFGILAVF 219

Query: 386 NRLNAKI 392
            ++  ++
Sbjct: 220 KQIEKRM 226


>gi|330965817|gb|EGH66077.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDALRALDFGPVSAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|209516019|ref|ZP_03264879.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503479|gb|EEA03475.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 229

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 16/189 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIST 226
           MFL   G    + T  T  K+ VFS  L  VL L   A +LS++   +    +  +Y  T
Sbjct: 1   MFLQGYGPLLLSGTWQT-VKLAVFSLALAFVLGLLGAAAKLSKN---RLSNGIGTVY--T 54

Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIA 282
            L+ G+P LVL+ L +   Q+  +       +  G   +  + F++    L     A+  
Sbjct: 55  TLVRGVPDLVLMLLLFYSIQIWLNNLT----DAFGWDQIDIDPFVAGVAVLGFIYGAYFT 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   IAVPRGQ+EA  A G+T  +    V+ PQ MR  +P + + +  ++K ++L  
Sbjct: 111 ETFRGAFIAVPRGQLEAGAAYGMTGWQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVS 170

Query: 343 AVGFADLVS 351
            +G AD+V 
Sbjct: 171 IIGLADVVK 179


>gi|160901202|ref|YP_001566784.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160366786|gb|ABX38399.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 273

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 64/118 (54%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +   +G +   P+++ + + L+  T+A +AEI R  + ++P  Q EAA +L     +  R
Sbjct: 128 ELKLVGWTFPFPDWVKVVLGLALPTSANVAEIFRGAIQSIPSAQWEAAQSLAFRRSEIFR 187

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           L++LPQ +R ++PP  + Y ++  ++SLA  VG  D+V       N   +    IL++
Sbjct: 188 LIVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDTAQIASNTVARTDFTILVY 245


>gi|327193819|gb|EGE60696.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           etli CNPAF512]
          Length = 104

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 53/85 (62%)

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           MEAA ALG  +  A R V++PQ +R+ +PPL +  ++L KNSSLAV +G ++L      I
Sbjct: 1   MEAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLFKNSSLAVVIGASELTHAVKEI 60

Query: 357 INQTGQAIEIILIWMFIYLSLSIMI 381
            N + +  EI LI   +YL  S++I
Sbjct: 61  ENLSFRTFEIYLIGTVLYLFFSLVI 85


>gi|317407717|gb|EFV87647.1| hypothetical protein HMPREF0005_03582 [Achromobacter xylosoxidans
           C54]
          Length = 223

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 72/122 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  + A + AE+ R+G+ AVPRGQ+EAA AL ++  +    V+LPQA+  ++P L + 
Sbjct: 95  VALGLHYATYCAEVYRAGIEAVPRGQLEAARALNMSPWRTAVGVVLPQAIPPVVPALGNY 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K++ L  A+   +L+     I + T +  E + +   ++L+LS++ A  +  L A
Sbjct: 155 LVAMFKDTPLLSAITVVELLQQSKMIGSTTFRYTEPLTLVGVLFLALSLIAAWGVRGLEA 214

Query: 391 KI 392
           ++
Sbjct: 215 RL 216


>gi|317047033|ref|YP_004114681.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948650|gb|ADU68125.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 218

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V+P + +  +AL+ YT+AF+ +I    + A+P+GQ EA+  LGLT  +    V+ PQ
Sbjct: 80  GIDVAP-WTAASLALTLYTSAFLVDIWYGSIRALPKGQWEASRCLGLTFGQTLYRVVAPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AIRIAIAPTVGFAVQVVKGTALASIIGFVELTKAGTILNNVTYQPFKV 186


>gi|229546204|ref|ZP_04434929.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|256852767|ref|ZP_05558137.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|307291100|ref|ZP_07570985.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|229308728|gb|EEN74715.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|256711226|gb|EEU26264.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|306497754|gb|EFM67286.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|315030717|gb|EFT42649.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
          Length = 221

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A +AEI+R GL  V +GQ+EAA + G ++ +    ++LPQA+R+++P + SQ
Sbjct: 92  VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K++S L   +   +L      ++    QTGQ   I  I   IY  ++  I+ F  
Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211

Query: 387 RLNAKIA 393
            L+   A
Sbjct: 212 WLSRNWA 218



 Score = 38.1 bits (87), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150
           T +++F  +I +TI GT++   R   N  +  +  +YVEV RNIP L+   VIF ++K
Sbjct: 26  TLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 83


>gi|218678695|ref|ZP_03526592.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 219

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 11/169 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +I G P LVL+   Y  +    V        G  + P F +  +AL+ + ++ + EIV
Sbjct: 60  TDIIRGTPVLVLVLASY--YVSAAV--------GLDLGP-FSAGVLALAVFCSSHVGEIV 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L A+P+GQ EAA A+GLT  +    VL PQ MR  +P   +    ++K S+L   +G
Sbjct: 109 RGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQDMRQCLPAWVNTAAEMVKASTLLSVIG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+L+     II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 169 VAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217


>gi|306825706|ref|ZP_07459045.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432067|gb|EFM35044.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 219

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|253990334|ref|YP_003041690.1| arginine permease ArtQ [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781784|emb|CAQ84947.1| arginine transport system permease protein artq [Photorhabdus
           asymbiotica]
          Length = 238

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 74/129 (57%), Gaps = 1/129 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           +V+P F+   IALS   +A+ ++ +R  + A+P GQ EA +ALGL   +    +++PQ  
Sbjct: 100 SVNP-FLCGVIALSLLYSAYASQTLRGAIKAIPAGQWEAGLALGLGRAEIFFRLIMPQMW 158

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L++Q+L LLK+++L   +   DL+    +I  +T +     +I   IYL+++++
Sbjct: 159 RHALPGLSNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIVALIYLAITLI 218

Query: 381 IALFMNRLN 389
               + ++ 
Sbjct: 219 SQFILKKIE 227


>gi|219852262|ref|YP_002466694.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanosphaerula palustris E1-9c]
 gi|219546521|gb|ACL16971.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanosphaerula palustris E1-9c]
          Length = 225

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V P F+ + + L   + A+ ++I R  + ++  GQM AA +LG++  +A   V+LPQ
Sbjct: 83  GLDVDPFFVGI-VVLGLRSGAYQSQIFRGAIQSIGDGQMLAARSLGMSRVQAITSVILPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +P  +++Y  LL +S++  A+G  ++++    I+ QT Q + + LI   IY+ L+
Sbjct: 142 AFRIALPGWSNEYPILLTDSAVCYAIGIMEILTRANNIVTQTYQPMPVFLICAGIYILLN 201


>gi|312132339|ref|YP_003999678.1| hism2 [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773877|gb|ADQ03365.1| HisM2 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 366

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|307747399|gb|ADN90669.1| glutamine ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni M1]
          Length = 233

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 18/209 (8%)

Query: 191 VFSFVLG---IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G   I++S F  ++  +  +   +  +  PLL    FL + LP       K+ +
Sbjct: 29  IFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFFLYYALP-------KFNI 81

Query: 245 HFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           H ++ P L         T+ P F    + LS    +++AE +R+G  A+ + Q EA ++L
Sbjct: 82  HLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQFEAGLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +       V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++ + T + 
Sbjct: 142 GFSKFGNLCYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSLNSLTYKT 201

Query: 364 IEIILI----WMFIYLSLSIMIALFMNRL 388
            E++ +    ++ I L LS ++  F  RL
Sbjct: 202 DELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +
Sbjct: 10  APAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQL 69

Query: 146 FFLYKSV 152
           FFLY ++
Sbjct: 70  FFLYYAL 76


>gi|239982050|ref|ZP_04704574.1| amino acid ABC transporter transmembrane protein [Streptomyces
           albus J1074]
 gi|291453902|ref|ZP_06593292.1| amino acid ABC transporter permease [Streptomyces albus J1074]
 gi|291356851|gb|EFE83753.1| amino acid ABC transporter permease [Streptomyces albus J1074]
          Length = 245

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 3/130 (2%)

Query: 265 EFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +F+ +Y   +AL     A+ AE+VR  L +V   Q EA +AL  T  +  RL+LLPQA+ 
Sbjct: 80  QFVPMYAAVLALGLSYGAYGAEVVRGALNSVTPAQREAGVALSFTPWQRMRLILLPQAVP 139

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +IPP  +  + LLK +++   +G  D+      +   T ++ +I  I + IY  ++ ++
Sbjct: 140 EMIPPFNNLLIELLKGTAIVSLLGVGDVSFAAYLVRLATQESAQIYTISLLIYFVIAFVL 199

Query: 382 ALFMNRLNAK 391
              M  L AK
Sbjct: 200 TRGMRALEAK 209


>gi|241666824|ref|YP_002984908.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862281|gb|ACS59946.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 234

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF FI  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA ++G++
Sbjct: 76  LGQFGFIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT + +E+
Sbjct: 136 GFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195

Query: 367 ILIWMFIYLSLSIMI 381
            L    IYL L+ +I
Sbjct: 196 FLCAAIIYLVLNFII 210


>gi|186470875|ref|YP_001862193.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184197184|gb|ACC75147.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 221

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +LI G+P L  + + Y   F  P  G       +TV        ++L+ Y +A+ AEI R
Sbjct: 56  WLIRGMPYLSQLMIVY---FGLPAFGITMTAVQATV--------VSLAIYASAYFAEIFR 104

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +   +VPRGQ+EAA A G++   A R + LPQA+   +P L +Q + ++K S++A  +  
Sbjct: 105 AAWASVPRGQIEAAQAFGVSRWAAFRAIELPQALAFAVPLLANQIILVIKESAVASVITV 164

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L      I+  T   +    + +  Y  L+  ++L + R  A I
Sbjct: 165 PELTMTASDIVASTYTYVGPYTLLIVSYWLLTQAVSLLVQRATAMI 210


>gi|108760413|ref|YP_633646.1| His/Glu/Gln/Arg/opine amino acid ABC transporter
           permease/periplasmic amino acid-binding protein
           [Myxococcus xanthus DK 1622]
 gi|108464293|gb|ABF89478.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Myxococcus xanthus DK 1622]
          Length = 481

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 48/67 (71%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L    AA+ +E+ R+G++AVPRGQ+EAA+ALG+  R A R V+LPQA R  +P + + 
Sbjct: 357 LGLGLNYAAYESEVYRAGVLAVPRGQLEAAMALGMPLRLALRRVILPQAFRVALPGVAND 416

Query: 331 YLNLLKN 337
           ++ LLK+
Sbjct: 417 FIALLKD 423


>gi|15893668|ref|NP_347017.1| amino acid ABC transporter permease [Clostridium acetobutylicum
           ATCC 824]
 gi|15023226|gb|AAK78357.1|AE007552_7 Amino acid (glutamine) ABC transporter, permease component
           [Clostridium acetobutylicum ATCC 824]
          Length = 216

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 69/125 (55%), Gaps = 1/125 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII-PPLTS 329
           + LS  + A+IAEI+R G+IA+ +GQ EA+ ALG           +   +  +I PP+ +
Sbjct: 91  LGLSLNSGAYIAEIIRGGIIAIDKGQFEASKALGFPEGPTNEEGYICLKLLEVINPPMGN 150

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ L+K++SL   +   +L+     +++ +G A+   +I    YL L+ +     +R+ 
Sbjct: 151 EFIALIKDTSLVSVITMEELLRKAQLLVSSSGDAVTPYVITGVFYLVLTTVFTFLFSRIE 210

Query: 390 AKIAL 394
            K++L
Sbjct: 211 KKLSL 215


>gi|312797032|ref|YP_004029954.1| Histidine transport system permease protein hisQ [Burkholderia
           rhizoxinica HKI 454]
 gi|312168807|emb|CBW75810.1| Histidine transport system permease protein hisQ [Burkholderia
           rhizoxinica HKI 454]
          Length = 229

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIST 226
           MFL   G      T  T  K+ + S  +  ++ L   A RLSR    +  + +  +Y  T
Sbjct: 1   MFLQGYGPVIAAGTWQT-IKLSLLSLAVAFMIGLLGAAARLSR---SRMPRMVGTVY--T 54

Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            LI G+P LVL+ L +   Q+  +   L     I    + P F +  + L     A+  E
Sbjct: 55  TLIRGVPDLVLMLLVFFSMQIWLNH--LTDLMQIEQIDIDP-FTAGVLTLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   ++VPRGQMEAA A G+T  +A   V+ PQ MR  +P + + +  L+K+++L   
Sbjct: 112 TFRGAFLSVPRGQMEAAAAYGMTSWQAFSRVMFPQMMRFALPGIGNNWQVLVKSTALVSI 171

Query: 344 VGFADLVS 351
           +G AD+V 
Sbjct: 172 IGLADVVK 179


>gi|331656935|ref|ZP_08357897.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA206]
 gi|331055183|gb|EGI27192.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA206]
          Length = 238

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|124384742|ref|YP_001026324.1| glutamine ABC transporter [Burkholderia mallei NCTC 10229]
 gi|126451385|ref|YP_001080402.1| amino acid ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|254358531|ref|ZP_04974804.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia mallei 2002721280]
 gi|124292762|gb|ABN02031.1| glutamine ABC transporter [Burkholderia mallei NCTC 10229]
 gi|126244255|gb|ABO07348.1| amino acid ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|148027658|gb|EDK85679.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia mallei 2002721280]
          Length = 247

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  AL     A++A  V +G+ A   GQ +A +ALGLT  +  R VLLPQA+R +
Sbjct: 94  PGLAAVVCALLLVGGAYLAHSVHAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            P   +Q+++L+K++SLA  VG  +L  V   + N+
Sbjct: 154 TPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNR 189


>gi|82777622|ref|YP_403971.1| arginine transporter permease subunit ArtQ [Shigella dysenteriae
           Sd197]
 gi|309785093|ref|ZP_07679726.1| arginine transport system permease protein artQ [Shigella
           dysenteriae 1617]
 gi|81241770|gb|ABB62480.1| arginine 3rd transport system permease protein [Shigella
           dysenteriae Sd197]
 gi|308927463|gb|EFP72937.1| arginine transport system permease protein artQ [Shigella
           dysenteriae 1617]
          Length = 238

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVVAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|315174636|gb|EFU18653.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
          Length = 221

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A +AEI+R GL  V +GQ+EAA + G ++ +    ++LPQA+R+++P + SQ
Sbjct: 92  VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 151

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K++S L   +   +L      ++    QTGQ   I  I   IY  ++  I+ F  
Sbjct: 152 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 211

Query: 387 RLNAKIA 393
            L+   A
Sbjct: 212 WLSRNWA 218


>gi|257418946|ref|ZP_05595940.1| ABC amino acid transporter permease [Enterococcus faecalis T11]
 gi|257160774|gb|EEU90734.1| ABC amino acid transporter permease [Enterococcus faecalis T11]
          Length = 215

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A +AEI+R GL  V +GQ+EAA + G ++ +    ++LPQA+R+++P + SQ
Sbjct: 86  VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 145

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K++S L   +   +L      ++    QTGQ   I  I   IY  ++  I+ F  
Sbjct: 146 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 205

Query: 387 RLNAKIA 393
            L+   A
Sbjct: 206 WLSRNWA 212



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150
           T +++F  +I +TI GT++   R   N  +  +  +YVEV RNIP L+   VIF ++K
Sbjct: 20  TLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 77


>gi|213691608|ref|YP_002322194.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523069|gb|ACJ51816.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457695|dbj|BAJ68316.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 366

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|193069396|ref|ZP_03050351.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E110019]
 gi|192957349|gb|EDV87797.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E110019]
          Length = 238

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R
Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++ 
Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 219

Query: 382 ALFMNRLNAKIALKEKK 398
              + R++ +    E++
Sbjct: 220 QYILKRIDLRATRFERR 236


>gi|302545137|ref|ZP_07297479.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462755|gb|EFL25848.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           himastatinicus ATCC 53653]
          Length = 216

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 51/81 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL  + + + AE+ R+G+  VP GQ EAA AL L+  +  + V+LPQA+R ++P L + 
Sbjct: 93  IALGLHYSTYTAEVYRAGIDGVPVGQWEAATALSLSRGRTWQAVILPQAIRRVVPALGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + +LK+S +   +G  D++ 
Sbjct: 153 VIAMLKDSPMLALIGVVDMLQ 173


>gi|239620728|ref|ZP_04663759.1| glutamate transport system permease protein gluD [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|239516304|gb|EEQ56171.1| glutamate transport system permease protein gluD [Bifidobacterium
           longum subsp. infantis CCUG 52486]
          Length = 366

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|197295419|ref|YP_002153960.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944898|emb|CAR57507.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 228

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 24/139 (17%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP L        +H D                 E+ +  +A++    A+  EIVR
Sbjct: 78  FIFFGLPAL-------GVHID-----------------EYTAAILAMTLNLGAYSVEIVR 113

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP+G +EAA AL ++  +  R V+LPQA+  + P L+SQ +  +  S++   +  
Sbjct: 114 AGVAAVPKGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISV 173

Query: 347 ADLVSVGGTIINQTGQAIE 365
           ADL      I ++  +A E
Sbjct: 174 ADLTYAASYIQSRNFRAFE 192


>gi|322374751|ref|ZP_08049265.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|321280251|gb|EFX57290.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 219

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSVQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|221201395|ref|ZP_03574434.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|221208876|ref|ZP_03581874.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221171332|gb|EEE03781.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221178663|gb|EEE11071.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
          Length = 246

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 7/206 (3%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ L +  +  +  
Sbjct: 39  VLSLTTAVALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIW 93

Query: 251 LGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           L QF + +G + +  + F++  + L     A+  E  R   +AVPRGQ+EA  A G++  
Sbjct: 94  LNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMSGA 153

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         T      IL
Sbjct: 154 RVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFIL 213

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   IYL+++ +  L + +L  + ++
Sbjct: 214 VAALIYLAITTVSNLVLIQLEKRYSM 239


>gi|54288344|gb|AAV31632.1| predicted abc-type amino acid transport system permease component
           [uncultured alpha proteobacterium EBAC2C11]
          Length = 224

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 70/125 (56%), Gaps = 4/125 (3%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P +    +AL+   + + AEI+RSG  +  +GQ+EAA AL L++R     +++PQ + 
Sbjct: 88  VWPFWCHALLALTINFSGYFAEILRSGFASTQKGQLEAAAALNLSNRTIFGSIIVPQTLI 147

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + P L+SQ++ L   + +   +G  DL   G  I ++T ++ E+ +    IY++    I
Sbjct: 148 KMYPSLSSQFIFLFLTTGVISEIGVEDLTHAGLYIDSRTFRSFEVFITLTAIYVA----I 203

Query: 382 ALFMN 386
           ALF+ 
Sbjct: 204 ALFLR 208


>gi|303328127|ref|ZP_07358566.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
 gi|302861953|gb|EFL84888.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
          Length = 230

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 11/121 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L Y L           FI     +  F+   + L C + A+ ++I R  + 
Sbjct: 63  GVPILVLLFLCYGL-----------FISLGLPADPFLICCLVLGCTSTAYQSQIFRGAIE 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ++AA ALG+      R ++LPQA+R  IP   +++  LLK+S++   +G  D++
Sbjct: 112 SLPQGQLKAARALGMNDFTGIRCIVLPQALRLSIPGWANEFSILLKDSAICYVLGTQDIM 171

Query: 351 S 351
           +
Sbjct: 172 A 172


>gi|83720821|ref|YP_441445.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|257139879|ref|ZP_05588141.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83654646|gb|ABC38709.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 229

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 13/162 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKPVL 251
           SF+LG+V +  A +LSR+   +    +  LY  T LI G+P LVL+ L  Y L      L
Sbjct: 28  SFLLGLVGA--AAKLSRN---RISNGIGTLY--TTLIRGVPDLVLMLLLFYSLQI---WL 77

Query: 252 GQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            QF + +    +  + F +  + L     A+  E  R   ++VPRGQ+EA  A G+T  +
Sbjct: 78  NQFTDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTDWQ 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
               ++ PQ MR  +P + + +  L+K+++L   +G AD+V 
Sbjct: 138 VFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179


>gi|254251721|ref|ZP_04945039.1| Amino acid ABC transporter [Burkholderia dolosa AUO158]
 gi|124894330|gb|EAY68210.1| Amino acid ABC transporter [Burkholderia dolosa AUO158]
          Length = 229

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 17/164 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFD 247
           SF+LG+V +  A +LSR+   +    +  +Y  T LI G+P LVL+     +++  L+  
Sbjct: 28  SFLLGLVGA--AAKLSRN---RVTNGIGTVY--TTLIRGVPDLVLMLLLFYSIQIWLNVA 80

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              LG         + P F++  + L     A+  E  R   ++VPRGQ+EA  A G+T+
Sbjct: 81  TDALGWDQI----DIDP-FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTN 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            +    ++ PQ MR  +P + + +  L+K+++L   +G AD+V 
Sbjct: 136 WQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179


>gi|307544385|ref|YP_003896864.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216409|emb|CBV41679.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 224

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 78/136 (57%), Gaps = 12/136 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSC 275
            A  +L+IS F   G P LV + L Y   +  P L  F   I G T +       + L+ 
Sbjct: 53  NAATMLFISFFR--GTPLLVQLFLFY---YGLPQLLDFLTQINGITAT------IMGLTL 101

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE +R+ ++ V R Q EAA+++G+T+ +  R ++LPQA R  +P L + +++++
Sbjct: 102 HFSAYMAESIRAAIVGVDRSQTEAALSIGMTNGQLMRRIVLPQATRVAVPTLMNYFIDMI 161

Query: 336 KNSSLAVAVGFADLVS 351
           K +SLA  +G  +L+ 
Sbjct: 162 KATSLAFTLGVTELMG 177


>gi|154508367|ref|ZP_02044009.1| hypothetical protein ACTODO_00864 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798001|gb|EDN80421.1| hypothetical protein ACTODO_00864 [Actinomyces odontolyticus ATCC
           17982]
          Length = 219

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 8/170 (4%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIA 282
           + +P    IA+ Y +L  + P+L Q  FI       G   S E  ++ + L     A++A
Sbjct: 44  YRIPVATQIAVAYVELSRNTPLLVQLFFIYFGLPRVGIKWSGETCAI-VGLIFLGGAYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSGL ++   Q E++ ALGLT  +  R V LPQA+ + +PPL +  + L+K +S+  
Sbjct: 103 EALRSGLDSIATIQWESSAALGLTRTQTLRHVALPQAIATSVPPLAANVIFLIKETSVVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            V   DLV V   +I  +    E +++ +  YL + + +++    +  K+
Sbjct: 163 VVALPDLVYVAKDLIGMSYNTSEALILLVIAYLVILLPVSIAARLIEKKV 212


>gi|120612398|ref|YP_972076.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120590862|gb|ABM34302.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 220

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 36/170 (21%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLV 236
           K+   SFV G++L + A  + R F           + +T + +P + +  F++F LP L 
Sbjct: 24  KLTALSFVPGVLLGM-AVAMLRLFPLPPLRWVLTLYVETFRNIPSVALLIFIVFALPDL- 81

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
               ++ + ++  V+                 L + L C  +AF A+ VRSG+  +P GQ
Sbjct: 82  ----EFVIDYEPSVV-----------------LTLVLVC--SAFTADYVRSGINTIPGGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +EAA++LG+   +    V+LPQA+RS++ P+TS  + L+ ++SLA  V F
Sbjct: 119 IEAALSLGMRPARIIWSVVLPQALRSVVQPMTSLLIALMLSTSLASQVPF 168


>gi|322691616|ref|YP_004221186.1| glutamate ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456472|dbj|BAJ67094.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 366

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|296156266|ref|ZP_06839105.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893772|gb|EFG73551.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 247

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 56/85 (65%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   ++  ALS    A+++  V +G+ +V   Q +AA++LGLT  +A R V+LPQA+R +
Sbjct: 94  PGLAAVVCALSLIGGAYLSHAVHAGIASVGAAQQQAALSLGLTRWQALRYVVLPQAVRIM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFAD 348
           +P   +Q+++L+K++SLA  VG  +
Sbjct: 154 MPSFVNQWVSLVKDTSLAYIVGVPE 178


>gi|294787059|ref|ZP_06752313.1| glutamate transport system permease protein GluD [Parascardovia
           denticolens F0305]
 gi|315226709|ref|ZP_07868497.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Parascardovia denticolens DSM 10105]
 gi|294485892|gb|EFG33526.1| glutamate transport system permease protein GluD [Parascardovia
           denticolens F0305]
 gi|315120841|gb|EFT83973.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Parascardovia denticolens DSM 10105]
          Length = 419

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 78/133 (58%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  + ++ ++L  Y  + +AE+VRSG+ ++P GQ EAA+ALGLT  ++  LV +PQA+ +
Sbjct: 146 SASYWAVTLSLVLYNGSVVAELVRSGVGSLPGGQHEAALALGLTRTRSLMLVEVPQAIYA 205

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P   +Q + +LK+++L   + + DL+     + +     ++ + +   +Y  +  +++
Sbjct: 206 MLPAAVTQLVVVLKDTALGSIILYTDLLQQSRRLGSMYFNILQTLFMAGILYFIMCFIVS 265

Query: 383 LFMNRLNAKIALK 395
                L A++A +
Sbjct: 266 RIAETLPARMAAR 278



 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P     ++    L G V T   A   ++ + + G L G GRL  N  V W+  + VE  R
Sbjct: 65  PALDSEAWTDFYLPGLVQTLAAAGVAIVGSVLFGLLFGIGRLIPNGFVRWLSGIVVEFCR 124

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHS 162
            +P L+++ F+++   S L +P  S
Sbjct: 125 AVPVLLMMIFMWRWFAS-LDVPSAS 148


>gi|186471431|ref|YP_001862749.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184197740|gb|ACC75703.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 241

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 67/122 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A++AE+ R+G+ +VPRGQ+EAA  LGL   +    V+LPQA R++ P + + 
Sbjct: 95  IALGVNVGAYMAEVFRAGIQSVPRGQIEAAGILGLGRSQVFIEVVLPQAARAVYPAIVNN 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LL  +SL  A+   +L      I  +T   I+   + +  YL LS  ++    ++ A
Sbjct: 155 LIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVTLIAYLILSNCLSWVAAQIGA 214

Query: 391 KI 392
           ++
Sbjct: 215 RV 216


>gi|257082920|ref|ZP_05577281.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|256990950|gb|EEU78252.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
          Length = 215

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 4/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A +AEI+R GL  V +GQ+EAA + G ++ +    ++LPQA+R+++P + SQ
Sbjct: 86  VSFTVFTTAALAEIIRGGLNGVDKGQIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQ 145

Query: 331 YLNLLKNSS-LAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
           ++ ++K++S L   +   +L      ++    QTGQ   I  I   IY  ++  I+ F  
Sbjct: 146 FVTVIKDTSFLYSVIALQELFGKSYILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSR 205

Query: 387 RLNAKIA 393
            L+   A
Sbjct: 206 WLSRNWA 212



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---VIFFLYK 150
           T +++F  +I +TI GT++   R   N  +  +  +YVEV RNIP L+   VIF ++K
Sbjct: 20  TLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWIYVIFLIFK 77


>gi|254519389|ref|ZP_05131445.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226913138|gb|EEH98339.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 482

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 17/159 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP- 249
           + + V+G++++L      R  + K  K L  +YIS   + G P LV + L   L+F  P 
Sbjct: 293 IIALVIGVIIALI-----RINNIKILKQLVEVYIS--FLRGTPLLVQLFL---LYFGLPQ 342

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++ Q   I   T +       I L+   +A+IAE +R    A+ +GQMEAA+++G+T  +
Sbjct: 343 IIPQLKGITAYTAA------VIGLALNASAYIAESLRGAFDAIDKGQMEAALSVGMTKMQ 396

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
             + +++PQ  R  +P L + +++ +K SSLA  +G  +
Sbjct: 397 GMKRIVMPQMFRVAVPSLGNVFVDNIKGSSLAFTLGVTE 435



 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           +I+ G   T  L+   MI A +IG ++   R++  K++  +  VY+   R  P LV +F 
Sbjct: 276 SIISGLKTTLSLSIISMIIALVIGVIIALIRINNIKILKQLVEVYISFLRGTPLLVQLFL 335

Query: 148 LYKSVLSVLP 157
           LY  +  ++P
Sbjct: 336 LYFGLPQIIP 345


>gi|254250730|ref|ZP_04944049.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
 gi|124879864|gb|EAY67220.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
          Length = 245

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 24/139 (17%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP L        +H D                 E+ +  +A++    A+  EIVR
Sbjct: 95  FIFFGLPAL-------GVHID-----------------EYTAAILAMTLNLGAYSVEIVR 130

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP+G +EAA AL ++  +  R V+LPQA+  + P L+SQ +  +  S++   +  
Sbjct: 131 AGVAAVPKGHLEAASALAMSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISV 190

Query: 347 ADLVSVGGTIINQTGQAIE 365
           ADL      I ++  +A E
Sbjct: 191 ADLTYAASYIQSRNFRAFE 209


>gi|153800770|ref|ZP_01955356.1| membrane protein [Vibrio cholerae MZO-3]
 gi|124123745|gb|EAY42488.1| membrane protein [Vibrio cholerae MZO-3]
          Length = 229

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 16/129 (12%)

Query: 228 LIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGS--TVSPEFMSLYIALSCYTAAFI 281
           +I GLP L+++   Y    Q+ F         FI G    +SP F+S  IALS   A++ 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLF---------FITGEFIEISP-FISGVIALSLIFASYA 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AV RGQ E A ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L 
Sbjct: 106 SQTLRGALKAVGRGQRETASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALV 165

Query: 342 VAVGFADLV 350
             +G  DL+
Sbjct: 166 SLIGVTDLL 174


>gi|325567192|ref|ZP_08143859.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158625|gb|EGC70771.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 214

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 25/176 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP L ++       FD+                 F +  IA    
Sbjct: 60  RGTPLLLQLIFVFYGLPILGIV-------FDR-----------------FEAALIAFIIN 95

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R G+ ++P GQ EAA  L L+  +  + +++PQ ++  +P + ++ +NL+K
Sbjct: 96  YAAYFAEIFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVK 155

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL   +G +D++ +G   + +    + ++ + + IYL ++ +  L + ++  K+
Sbjct: 156 DTSLVYILGLSDVMRIGKIAMERDSTLLPLVGVGL-IYLVMTGVFTLLLKQIETKL 210


>gi|241762911|ref|ZP_04760974.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241368086|gb|EER62291.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 273

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 59/106 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ + + L+  T+A +AEI R  + ++P  Q EAA +L     +  RLV+LPQ +R +
Sbjct: 139 PDWVKVVLGLALPTSANVAEIFRGAIQSIPSAQWEAAQSLAFRRSQIFRLVVLPQCVRRM 198

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +PP  + Y ++  ++SLA  VG  D+V       N   +    IL+
Sbjct: 199 LPPWMNLYASITMSTSLASLVGVHDVVDTAQIASNTVARTDFTILV 244



 Score = 36.6 bits (83), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 7/76 (9%)

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH--SIVL 165
           T +G +VGA  LS    V  + R YV+VFRN P LV+I+F       V P   H  S   
Sbjct: 81  TAVGLVVGALSLSPVHAVRVVVRSYVQVFRNAPILVLIYF----TTYVFPFEVHLVSWTF 136

Query: 166 PFGMFLN-NRGLSFPT 180
           PF  ++    GL+ PT
Sbjct: 137 PFPDWVKVVLGLALPT 152


>gi|218516893|ref|ZP_03513733.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 102

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 4/102 (3%)

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           M+A +ALGL  R     V+LPQA+   IP L S  ++L K S+L  AVG ADL+ VG  I
Sbjct: 1   MDACVALGLPQRVQVVNVVLPQAVLRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNI 60

Query: 357 INQTGQAIEII----LIWMFIYLSLSIMIALFMNRLNAKIAL 394
            N T + +E++    LI+  I   L+  ++L   R+  K+A+
Sbjct: 61  SNNTARPVEVLTVVALIYFVIAFPLTRAVSLMEGRILKKLAI 102


>gi|323967297|gb|EGB62720.1| inner membrane transport system [Escherichia coli M863]
 gi|327253649|gb|EGE65278.1| arginine transport system permease protein artQ [Escherichia coli
           STEC_7v]
          Length = 238

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R
Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++ 
Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 219

Query: 382 ALFMNRLNAKIALKEKK 398
              + R++ +    E++
Sbjct: 220 QYILKRIDLRATRFERR 236


>gi|306825322|ref|ZP_07458664.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432758|gb|EFM35732.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 213

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 29/217 (13%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236
           ++T+   A + +FS  LGIV++ FA ++            PL Y+    I+   G P L+
Sbjct: 16  SMTLQVFALVLIFSIPLGIVVA-FALQVRWK---------PLHYLIDLYIWVMRGTPLLL 65

Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            LI + Y L    P +G + + +  +          IA     AA+ AEI R G+  +P+
Sbjct: 66  QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    
Sbjct: 113 GQYEAAKVLKFSSFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  N+    + + L    IYL +  ++ +   +L  K
Sbjct: 173 TAANRDASLVPMFLAGA-IYLIMIGLVTIIAKKLEKK 208


>gi|238027409|ref|YP_002911640.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           glumae BGR1]
 gi|237876603|gb|ACR28936.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           glumae BGR1]
          Length = 241

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 12/151 (7%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGG 259
           A +LSR    +T + L   Y + F   G+P L++I   Y  +F    L    GQ+    G
Sbjct: 46  ALKLSRR---RTLRVLGDAYTTVFR--GVPELLVI---YLFYFGGSSLVTTVGQWFGADG 97

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P F    +A+   + A+ AE+ R+ ++AV RG++EAA A+G+    A R VL+PQ 
Sbjct: 98  FVGVPPFAIGAVAVGMISGAYQAEVYRAAVLAVSRGELEAARAIGMPRLTAVRRVLIPQV 157

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +R  +P L + +   LK+S+L    G A+L+
Sbjct: 158 LRFALPGLGNVWQLSLKDSALISVTGLAELL 188



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
               + + +L+G + T  L  S +   ++ G LV A +LS  + +  +   Y  VFR +P
Sbjct: 11  GSQGWGSVLLLGALMTIVLTLSALAIGSVFGGLVAALKLSRRRTLRVLGDAYTTVFRGVP 70

Query: 141 PLVVIFFLY 149
            L+VI+  Y
Sbjct: 71  ELLVIYLFY 79


>gi|161525299|ref|YP_001580311.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|221214043|ref|ZP_03587016.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|160342728|gb|ABX15814.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|221166220|gb|EED98693.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
          Length = 260

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ L +  +  
Sbjct: 50  ELSVLSLATAVALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSI 104

Query: 248 KPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  L QF + +G + +  + F++  + L     A+  E  R   +AVPRGQ+EA  A G+
Sbjct: 105 QIWLNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGM 164

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         T     
Sbjct: 165 SGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 224

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            IL+   IYL+++ +  L + +L  + ++
Sbjct: 225 FILVAALIYLAITTVSNLVLIQLEKRYSM 253


>gi|330807009|ref|YP_004351471.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375117|gb|AEA66467.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 231

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 23/193 (11%)

Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260
           KT    PL ++    + L+ G+P L+ + L Y            +F KP L    F  G 
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNLMRALGEYFGKPDLALDAFAAG- 99

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    +++PQ  
Sbjct: 100 ---------VIALGLCFGAYATEVFRGAILAIPKGHREAGVALGLSKWRIFTRLIMPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L + ++ L+K+++L   +G  +++      +  + Q     ++  F+YL L+++
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIGVTVSKQPFTFYMVAAFMYLGLTVL 210

Query: 381 IALFMNRLNAKIA 393
             + M+ L  + A
Sbjct: 211 AMIGMHLLERRAA 223


>gi|323163915|gb|EFZ49724.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Shigella sonnei 53G]
          Length = 99

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 55/92 (59%)

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +A R VLLP A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  
Sbjct: 1   MGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAH 60

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A E        Y+ ++ +I L M  +  K+ L
Sbjct: 61  AWESFTAITLAYVLINAVIMLVMTLVERKVRL 92


>gi|218548381|ref|YP_002382172.1| arginine transporter permease subunit ArtQ [Escherichia fergusonii
           ATCC 35469]
 gi|218355922|emb|CAQ88537.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
 gi|323976753|gb|EGB71841.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324112656|gb|EGC06632.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325496804|gb|EGC94663.1| arginine transporter permease subunit ArtQ [Escherichia fergusonii
           ECD227]
          Length = 238

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R
Sbjct: 101 VSP-FLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++ 
Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 219

Query: 382 ALFMNRLNAKIALKEKK 398
              + R++ +    E++
Sbjct: 220 QYILKRIDLRATRFERR 236


>gi|330501278|ref|YP_004378147.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328915564|gb|AEB56395.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 215

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP +++   AL+ +T+AF+AEI R  + ++ RGQ EA+ +L ++  +  R V+LPQ
Sbjct: 79  GIDVSP-WLAAATALTLFTSAFLAEIWRGCVESISRGQWEASESLAMSRLETLRHVVLPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|303233085|ref|ZP_07319760.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302480860|gb|EFL43945.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 564

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 24/208 (11%)

Query: 194 FVLGIVLSLFAT-RLSRHFHE-----KTGKALPLLYISTFLIFGLPTLV---LIALKYQL 244
           F++G+++++F +  ++RH        KT   +  +YI  F   G P +V   LI    +L
Sbjct: 360 FLIGLLIAIFQSLHVARHHRSTYALYKTLDIIIKVYIEIFR--GTPMMVQAMLIFYGSKL 417

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F            G  +SP   S ++ +S  + A+++E VR G++ V  GQ+E A ALG
Sbjct: 418 FF------------GIDLSP-LTSAFLIVSINSGAYLSETVRGGILGVSAGQLEGAKALG 464

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L H      ++LPQA+ SI+P + ++    +K++S+   +  ++L  V  +I   T Q  
Sbjct: 465 LGHWDTMVHIILPQAIVSILPSVGNELNMNIKDTSVLNVIAVSELFFVTKSIAGTTYQTF 524

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  LI   IY  L+   ++ + ++   +
Sbjct: 525 QTYLITSVIYFILTFAASIMLTQIERHV 552


>gi|293391094|ref|ZP_06635428.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951628|gb|EFE01747.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 227

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 76/131 (58%), Gaps = 6/131 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ +E +R+ ++++P+GQ EA+ ++G+ + +     ++PQA+R  +P
Sbjct: 95  FPTAIIAFSINIGAYASETIRAAILSIPKGQWEASYSIGMNYFQTFIRTIMPQALRVSVP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIA 382
           PL++ +++ +K++SLA  V   ++  V   I   T +  E I+I+     IY  + ++++
Sbjct: 155 PLSNTFISNVKDTSLASLVLVTEMFRVAQNI---TAENYEFIMIYSEAALIYWCICLVLS 211

Query: 383 LFMNRLNAKIA 393
               RL  +++
Sbjct: 212 FAQERLEKRLS 222


>gi|323339555|ref|ZP_08079830.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ruminis ATCC 25644]
 gi|323093035|gb|EFZ35632.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ruminis ATCC 25644]
          Length = 227

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 22/156 (14%)

Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           LY+  F I  +PT+VL+ L Y     Q H +              VS E+M++ +A S +
Sbjct: 60  LYLEFFRI--VPTIVLLFLVYYILPRQFHVE--------------VSAEWMAV-LAFSLW 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A  ++IVR  L +VP+ Q EA +ALGLT  +    VL+PQA    +P   +    ++K
Sbjct: 103 VSAEFSDIVRGALESVPKHQREAGLALGLTKGQLFVHVLMPQAFMLELPAAINLATRVVK 162

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +SL + +   D+++VG  II    Q     + W++
Sbjct: 163 TTSLLMIISVMDVINVGQQIIEANNQQYPSGVFWIY 198


>gi|237736050|ref|ZP_04566531.1| polar amino acid ABC transporter, inner membrane subunit
           [Fusobacterium mortiferum ATCC 9817]
 gi|229421864|gb|EEO36911.1| polar amino acid ABC transporter, inner membrane subunit
           [Fusobacterium mortiferum ATCC 9817]
          Length = 255

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 67/120 (55%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+I+V +GQ EAA A+G+ H +    V+LPQ +R+I+P   ++++
Sbjct: 108 VSINTGAYMSEIVRGGIISVDKGQFEAAQAIGMNHFQTMTNVVLPQVVRNILPATGNEFV 167

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L     T+     +  E   I   +Y  ++  I   +  +  K+
Sbjct: 168 INIKDTSVLNVISVSELFFQTKTVAGNNFRYFETFFITCILYFVMTFTITRILRYIEVKL 227


>gi|307331405|ref|ZP_07610524.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces violaceusniger Tu 4113]
 gi|306882964|gb|EFN14031.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces violaceusniger Tu 4113]
          Length = 216

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 50/81 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL  + + + AE+ R+G+  VP GQ EAA AL L+  +    V+LPQA+R ++P L + 
Sbjct: 93  IALGLHYSTYTAEVYRAGIDGVPNGQWEAATALSLSRGRTWTAVILPQAIRRVVPALGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + +LK+S +   +G  D++ 
Sbjct: 153 VIAMLKDSPMLALIGVVDMLQ 173


>gi|289168424|ref|YP_003446693.1| ABC-type amino acid transporter, membrane-spanning permease
           [Streptococcus mitis B6]
 gi|307704347|ref|ZP_07641264.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|288907991|emb|CBJ22831.1| ABC-type amino acid transporter, membrane-spanning permease
           [Streptococcus mitis B6]
 gi|307622107|gb|EFO01127.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 219

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|317048144|ref|YP_004115792.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949761|gb|ADU69236.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 502

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 10/181 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V +++ GIVL L    L++       +     YI  +L   LP LVL+   + L   
Sbjct: 26  QLSVLTWLGGIVLGL-GVALAKQSRNAVLRNAATCYI--WLFRSLPLLVLLIFIFNL--- 79

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +  F    G   +P F +  +AL     A+IAEI R GL++V RGQ EA  ALGL  
Sbjct: 80  -PQI--FPATSGMLSNP-FAAGLLALIISETAYIAEIHRGGLLSVQRGQFEAGRALGLNT 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    +++PQA+R  +P L ++++ ++K +SL   +  ++++ VG  +     + +E +
Sbjct: 136 AQIRLSIIIPQALRISLPTLVNEFITIVKMTSLVSVISLSEILMVGERLYTDNFKVMETL 195

Query: 368 L 368
           L
Sbjct: 196 L 196


>gi|162148487|ref|YP_001602948.1| hypothetical protein GDI_2708 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161787064|emb|CAP56651.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 144

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  VS   ++++ A+      +IAEIV  GL +VP  Q+EAA+ L L      R V++
Sbjct: 7   VAGLDVSERTVAIW-AIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIV 65

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+  I+PP     +  +K+++LA  VG  +L   G  + N+    I++ L  + +Y +
Sbjct: 66  PQALPVIVPPAVGYLVLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFA 125

Query: 377 LSIMIALFMNRLNAKIALK 395
           LS  +      L  ++AL 
Sbjct: 126 LSYPLTRLSRMLEKRLALS 144


>gi|163792348|ref|ZP_02186325.1| ABC polar amino acid transporter, inner membrane subunit [alpha
           proteobacterium BAL199]
 gi|159182053|gb|EDP66562.1| ABC polar amino acid transporter, inner membrane subunit [alpha
           proteobacterium BAL199]
          Length = 227

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 14/172 (8%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI L L    + R F  +    L +L++   ++  LP LVLI + Y   F  P +G    
Sbjct: 42  GIALGLLLAAV-RSFRVRPVNVLIVLFVD--VLRALPPLVLILIIY---FGLPSVG-IRL 94

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G       F  L++ LS   AAF  EI  SG++++ +GQ EAA + GLT  +    V+L
Sbjct: 95  SG-------FAVLWLVLSLVLAAFAEEIFWSGILSIRKGQWEAARSTGLTFLQTLTHVIL 147

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           PQA+R  +PPLT++ + + KN++L   +G  +++    T  + +G A  ++L
Sbjct: 148 PQAVRMTVPPLTNRTIAITKNTALGAVIGVPEILMQAQTAQSFSGNATPLLL 199


>gi|67639860|ref|ZP_00438690.1| histidine transport system permease protein HisQ [Burkholderia
           mallei GB8 horse 4]
 gi|121600455|ref|YP_992327.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124385405|ref|YP_001028961.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126449260|ref|YP_001081124.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|166999939|ref|ZP_02265768.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei PRL-20]
 gi|254177473|ref|ZP_04884128.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei ATCC 10399]
 gi|254199421|ref|ZP_04905787.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei FMH]
 gi|254205736|ref|ZP_04912088.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei JHU]
 gi|254357893|ref|ZP_04974166.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei 2002721280]
 gi|121229265|gb|ABM51783.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124293425|gb|ABN02694.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126242130|gb|ABO05223.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|147749017|gb|EDK56091.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei FMH]
 gi|147753179|gb|EDK60244.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei JHU]
 gi|148027020|gb|EDK85041.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei 2002721280]
 gi|160698512|gb|EDP88482.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei ATCC 10399]
 gi|238520468|gb|EEP83928.1| histidine transport system permease protein HisQ [Burkholderia
           mallei GB8 horse 4]
 gi|243064057|gb|EES46243.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei PRL-20]
          Length = 229

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 12/186 (6%)

Query: 169 MFLNNRG---LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           MFL   G   LS    T+         SF+LG+V +  A +LSR    +    +  LY  
Sbjct: 1   MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGA--AAKLSR---SRVSNGIGTLY-- 53

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      L          + P F +  + L     A+  E 
Sbjct: 54  TTLIRGVPDLVLMLLLFYSLQIWLNQLTDLMNWDQIDIDP-FAAGVLVLGFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   ++VPRGQ+EA  A G+T+ +    V+ PQ MR  +P + + +  L+K+++L   +
Sbjct: 113 FRGAFLSVPRGQLEAGSAYGMTNWQVFARVMFPQMMRFALPGIGNNWQVLVKSTALVSII 172

Query: 345 GFADLV 350
           G AD+V
Sbjct: 173 GLADVV 178


>gi|209543095|ref|YP_002275324.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530772|gb|ACI50709.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 217

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  VS   ++++ A+      +IAEIV  GL +VP  Q+EAA+ L L      R V++
Sbjct: 80  VAGLDVSERTVAIW-AIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIV 138

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+  I+PP     +  +K+++LA  VG  +L   G  + N+    I++ L  + +Y +
Sbjct: 139 PQALPVIVPPAVGYLVLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFA 198

Query: 377 LSIMIALFMNRLNAKIALK 395
           LS  +      L  ++AL 
Sbjct: 199 LSYPLTRLSRMLEKRLALS 217


>gi|161503949|ref|YP_001571061.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865296|gb|ABX21919.1| hypothetical protein SARI_02041 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 238

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 95/187 (50%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L     +   L F + PV  +  NF     VSP F+   +
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGVTLNLGFAQIPVQMEIENF----DVSP-FLCGVV 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AA+ ++ +R  L A+P GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALSLLYAAYASQTLRGALKAIPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T       ++   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQDPFNWYILAAAIYLVITLISQYILKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|311107287|ref|YP_003980140.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Achromobacter
           xylosoxidans A8]
 gi|310761976|gb|ADP17425.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Achromobacter xylosoxidans A8]
          Length = 223

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 70/121 (57%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  + A + AE+ R+G+ AVPRGQ EAA AL ++  +    V+LPQA+  ++P L +  
Sbjct: 96  ALGLHYATYCAEVYRAGIEAVPRGQWEAATALNMSRWRTAVGVVLPQAIPPVVPALGNYL 155

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + + K++ L  A+   +L+     I + T +  E + +   ++L+LS++ A  +  L A+
Sbjct: 156 VAMFKDTPLLSAITVVELLQQSKMIGSATFRYTEPLTLVGLLFLALSLVAAWGVRGLEAR 215

Query: 392 I 392
           +
Sbjct: 216 L 216


>gi|310641778|ref|YP_003946536.1| sulfur-containing amino acid abc transporter, permease protein tcym
           [Paenibacillus polymyxa SC2]
 gi|309246728|gb|ADO56295.1| Sulfur-containing amino acid ABC transporter, permease protein TcyM
           [Paenibacillus polymyxa SC2]
          Length = 236

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 105/209 (50%), Gaps = 11/209 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S + G+V+ +  T L+R ++      +   Y++   I G P L+ + L Y   F  
Sbjct: 25  ITVVSVLAGLVIGII-TALARIYNVPVLSQISHGYVT--FIRGTPMLMHLLLIY---FSL 78

Query: 249 PVL-----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           P+L       F +   S   P  +   I+ S  + A+++E+VRSG+ +V +GQ+EAA A+
Sbjct: 79  PLLIDAGAKHFGWSLQSKDVPYMVFALISFSITSGAYMSEVVRSGIQSVNKGQIEAAYAV 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R ++ PQA    +P LT+  + +L  S+LA  V   ++ +    + +   + 
Sbjct: 139 GMTTWQVLRRIVFPQAFVVSLPNLTNSVIGMLHGSTLAFTVSVTEIQAQAEILASTNWKY 198

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +E+ +    ++  L+++I      +  KI
Sbjct: 199 LEVYIAAALLFWGLTVLIERISGLVEKKI 227


>gi|309779618|ref|ZP_07674377.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308921559|gb|EFP67197.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 248

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 1/113 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++P F ++ + LS + AAF AE +R+G+ AVP   +EAA +LG + R+    V LP A+R
Sbjct: 100 LTPFFWAVTL-LSLHKAAFHAEALRAGIEAVPPAMLEAATSLGFSARERLWRVQLPLALR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +  P L +  + L+K SSLA A+   DL      I  Q    +E +++ +  Y
Sbjct: 159 AAWPSLMNNTVELVKASSLASAIAVGDLTYSALMIWTQRDNVLECMVLLLLFY 211


>gi|311694312|gb|ADP97185.1| ABC transporter, membrane spanning protein [marine bacterium HP15]
          Length = 217

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 80/142 (56%), Gaps = 3/142 (2%)

Query: 255 NFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F+G  G+ ++P F++  I LS YT AF++E+ RSG  +V      AA +LG+T  +   
Sbjct: 77  TFVGAMGNPLAP-FVAGSIVLSLYTMAFMSEVFRSGFESVSPSMQTAARSLGMTKWQTIY 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            + LP  +R++ P      L+++K+S+L   +G+ +L+     +I++T Q +EI++    
Sbjct: 136 HIRLPIGLRAVFPSWLGVALSVIKDSALVSVIGYMELLRTSEQLISRTQQPLEILIGVGI 195

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
            Y  +S  ++ +   +  K+A+
Sbjct: 196 FYFIISYPLSHYGRYVERKMAI 217


>gi|242239704|ref|YP_002987885.1| arginine transporter permease subunit ArtQ [Dickeya dadantii
           Ech703]
 gi|242131761|gb|ACS86063.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 238

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 12/188 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNF-----IGGSTVSPEFMSLY 270
           + LP + +  F+ FG   L+L +A  + L+     LG   F     I    VSP F+   
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLADGFTLN-----LGVVQFPVKLNIENFEVSP-FLCGV 108

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+   AA+ ++ +R  L AVPRGQ E+  ALG++     R +++PQ  R  +P L +Q
Sbjct: 109 IALALLYAAYASQTLRGALKAVPRGQWESGQALGMSKSVIFRRLIMPQMWRHALPGLGNQ 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +   DL+    +I  +T +     +I   IYL+++++    + R+  
Sbjct: 169 WLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLAITLLSQAILQRIET 228

Query: 391 KIALKEKK 398
           +    E++
Sbjct: 229 RATRFERR 236


>gi|241554229|ref|YP_002979442.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863535|gb|ACS61197.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 222

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 59/107 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS Y AA+ +EI RSG  AVP+G +EA + +GLT  +  R +LLP+    ++PP  + 
Sbjct: 93  IGLSIYGAAYFSEIFRSGFAAVPKGHIEAGLCVGLTQGQIVRRILLPEMTMLVLPPSVNM 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            + L+K +++   +   +L +    I +Q    +E + +    Y +L
Sbjct: 153 TIILMKETAVLSIITVPELTATLSAIGSQQYAFVEALFVLALFYWAL 199


>gi|327394993|dbj|BAK12415.1| probable amino-acid ABC transporter permease protein YckJ [Pantoea
           ananatis AJ13355]
          Length = 245

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+S  F +  +AL     A++AE+ R+G+ +VP+GQ+EAA  LG++ R+    V++PQ
Sbjct: 82  GITMS-AFTAGVLALGINVGAYLAEVFRAGIQSVPKGQLEAAWILGISRRQRFLNVVMPQ 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R++ P + +  + LL  +SL  A+   +L      I  +T   I+   +   +YL LS
Sbjct: 141 AARAVWPAIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALVYLFLS 200

Query: 379 IMIALFMN 386
            + +   N
Sbjct: 201 NLFSWLGN 208


>gi|291618613|ref|YP_003521355.1| YckJ [Pantoea ananatis LMG 20103]
 gi|291153643|gb|ADD78227.1| YckJ [Pantoea ananatis LMG 20103]
          Length = 245

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+S  F +  +AL     A++AE+ R+G+ +VP+GQ+EAA  LG++ R+    V++PQ
Sbjct: 82  GITMS-AFTAGVLALGINVGAYLAEVFRAGIQSVPKGQLEAAWILGISRRQRFLNVVMPQ 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R++ P + +  + LL  +SL  A+   +L      I  +T   I+   +   +YL LS
Sbjct: 141 AARAVWPAIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALVYLFLS 200

Query: 379 IMIALFMN 386
            + +   N
Sbjct: 201 NLFSWLGN 208


>gi|257455730|ref|ZP_05620958.1| histidine transport system permease protein HisQ [Enhydrobacter
           aerosaccus SK60]
 gi|257446858|gb|EEV21873.1| histidine transport system permease protein HisQ [Enhydrobacter
           aerosaccus SK60]
          Length = 239

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 1/132 (0%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L QF   G   VSP F +   ALS    A+  E  R     +P+GQ EAA A+G+   +
Sbjct: 81  ILSQFGNTGYVDVSP-FWAGVTALSVAFGAYATETFRMAFQEIPKGQAEAAQAIGMKKFQ 139

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V LPQ  R  +P L + +L LLK+++L   VG  D++    T    T       + 
Sbjct: 140 ILWRVTLPQVWRIALPGLGNLFLVLLKDTALVSVVGLEDIMRHAKTAATSTQSPFTFYMA 199

Query: 370 WMFIYLSLSIMI 381
              +YLSL+++I
Sbjct: 200 AALLYLSLTVII 211


>gi|209547516|ref|YP_002279434.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538760|gb|ACI58694.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + A + AE+ R+G+  VPRGQ EAA A  LT R+A   V+LPQA+  +IP L + 
Sbjct: 93  IGMGIHYATYTAEVYRAGIENVPRGQWEAAKATNLTTRQAWIHVVLPQAIPPMIPALANY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           ++ + K + L  A+   +L++   +I N   + IE
Sbjct: 153 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIE 187


>gi|157369179|ref|YP_001477168.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320943|gb|ABV40040.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 218

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL+  +    V++PQ
Sbjct: 80  GIDVSP-WTAAALALTLFTSAFLVDIWSGSIAALPKGQWEASHCLGLSFGQTLVRVIVPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 186


>gi|152986120|ref|YP_001349969.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PA7]
 gi|150961278|gb|ABR83303.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PA7]
          Length = 229

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +      L++  P  G  ++I    ++P F+S    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQALLNWVAPQFGYDDYI---DLNP-FVSGVGTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA  A G++HR+    V +PQ +R  IP  T+ +L L+K ++L   VG
Sbjct: 114 RGAFMAIPKGQGEAGYAYGMSHRQVFFRVQVPQMIRLAIPGFTNNWLVLVKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178


>gi|330500964|ref|YP_004377833.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328915250|gb|AEB56081.1| amino acid ABC transporter, permease protein [Pseudomonas mendocina
           NK-01]
          Length = 220

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 4/94 (4%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +CYTA    E+ R+GL AVPRGQ EA  AL ++   A R ++LPQA+R I+P L +  + 
Sbjct: 101 ACYTA----EVYRAGLDAVPRGQWEAVTALNMSPLSAYRQIILPQALRPILPALGNYLVA 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           +LK++ +  A+   +++     I +++ + +E I
Sbjct: 157 MLKDTPVLSAITVVEIMQQAKNIGSESFRYLEPI 190


>gi|298504919|gb|ADI83642.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400]
          Length = 340

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 86/182 (47%), Gaps = 25/182 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP+L                       G T+ P   +  I L   
Sbjct: 184 RGTPLLLQLFFIYYGLPSL-----------------------GITLKP-ITAAVIGLGLN 219

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++ EI+R  + ++  GQ EAA ALG+T+ +  R V++PQ  + ++PP+ ++++ L+K
Sbjct: 220 YSAYLGEIIRGAIQSIDHGQTEAAKALGMTYGQTMRRVVIPQTYKRLMPPIGNEFIALIK 279

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++L   +   +L+     + N       +IL  + IYL  +        ++  +  + E
Sbjct: 280 DTALVSTIAMVELMRAADQMFNTYFNVTALILAAV-IYLIFTTFFTFLFEKIEHRAGIYE 338

Query: 397 KK 398
           ++
Sbjct: 339 RR 340



 Score = 37.0 bits (84), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS-SYATAILVGFVNTFWLAFSGMIPAT 108
           +N E  N +  +    ER   E   G V +  D   +   +L G V T  L    M  + 
Sbjct: 103 DNSEAKNFTASV----ER---EKKPGYVTFLQDCLKFLPVLLKGAVMTLLLVLCTMFISP 155

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I G L+  GR+S  + ++ +C   + +FR  P L+ +FF+Y
Sbjct: 156 IGGLLIALGRISTFRPLSALCWFVIWLFRGTPLLLQLFFIY 196


>gi|237807674|ref|YP_002892114.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237499935|gb|ACQ92528.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 246

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  +++     A++AE  R  ++AV RGQ+EAA A G++  +  R VL PQ +R
Sbjct: 112 VSP-FIAGVLSIGFIFGAYMAETFRGAILAVERGQLEAAYAYGMSPWQVFRRVLFPQMVR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   + +L LLK ++L   +G  D+V   G     T       +    I+L  + + 
Sbjct: 171 HALPGFGNNWLVLLKTTALVSVIGLDDMVRKAGLAAGSTQLPFTFYMAVALIFLGFTAIS 230

Query: 382 ALFMNRLNAKIALKEK 397
              +     + A+K +
Sbjct: 231 TALLRWAEVRYAIKTR 246


>gi|78067959|ref|YP_370728.1| amino acid ABC transporter inner membrane protein [Burkholderia sp.
           383]
 gi|77968704|gb|ABB10084.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia sp. 383]
          Length = 226

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 14/149 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G++L+ F   L+R F  +  +A    YI  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLLLA-FGAALTRLFGPRWAQAAVRFYI--WLFRGSPLLVQL---FVIFYGLPSVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T  +A R
Sbjct: 84  --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQWEAAYSMAMTRPQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
             +LPQA R  +P L++ +++L+K++SLA
Sbjct: 136 RAILPQAARVALPALSNSFISLVKDTSLA 164


>gi|311695923|gb|ADP98796.1| amino acid ABC transporter, inner membrane subunit [marine
           bacterium HP15]
          Length = 247

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + +     A++ E  R   +AV  GQ+EAA A G T     R ++LPQ MR  +P
Sbjct: 113 FISGVVTIGLIFGAYMTETFRGAFLAVETGQIEAARAYGFTRFHTFRRIMLPQMMRHALP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +  LLK ++L   +G  D+V V               +   F+YL+L+    LF+
Sbjct: 173 GLGNNWQVLLKTTALVSIIGLTDMVRVAEEAAKAERMPFHFFIPVAFVYLALTAGSELFI 232

Query: 386 NRLNAK 391
             L+ +
Sbjct: 233 KWLDKR 238


>gi|24379911|ref|NP_721866.1| putative amino acid ABC transporter, integral membrane protein
           [Streptococcus mutans UA159]
 gi|290580109|ref|YP_003484501.1| putative amino acid ABC transporter integral membrane protein
           [Streptococcus mutans NN2025]
 gi|24377890|gb|AAN59172.1|AE014984_7 putative amino acid ABC transporter, integral membrane protein
           [Streptococcus mutans UA159]
 gi|254997008|dbj|BAH87609.1| putative amino acid ABC transporter integral membrane protein
           [Streptococcus mutans NN2025]
          Length = 216

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 72/124 (58%), Gaps = 4/124 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL A+  GQ EA +A GLT+ +    ++ PQA+R ++P + SQ+
Sbjct: 87  AFTVFTSAALAEIIRGGLNAIDNGQTEAGLAQGLTNSQIFIYIIFPQAIRKMLPAIISQF 146

Query: 332 LNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNR 387
           + ++K++S L   +   +L      ++ +  +A ++  ++  +   Y  ++ +I+ F  R
Sbjct: 147 VTVIKDTSFLYSVIALQELFGKSQILMGKYFEADQVFALYGIVAVTYFIINFIISSFSRR 206

Query: 388 LNAK 391
           L  K
Sbjct: 207 LAKK 210



 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +++F  ++ +TI+GT++   R   NK + WI  +Y+E  RN+P L+ IF +
Sbjct: 13  LLQGLWLTLYISFISIVLSTILGTILAVMRNGKNKPLRWIASIYIEFVRNVPNLLWIFIV 72

Query: 149 Y 149
           +
Sbjct: 73  F 73


>gi|13474097|ref|NP_105665.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14024849|dbj|BAB51451.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 218

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 65/109 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++   AA+  EIV +GL AVP GQ EAA+ALGL  R+    ++LPQA++ I P LTSQ
Sbjct: 91  LAMTLNMAAYTIEIVGAGLDAVPGGQTEAALALGLRPRQVFIKIVLPQALKIIYPALTSQ 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            + ++  S++   +   +L      +  +T ++ E   +   +YL++S+
Sbjct: 151 IVIMMLESAVVSQIAVRELTYEADMLQARTFRSFETYFVVTLVYLAMSM 199


>gi|322377818|ref|ZP_08052307.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321281241|gb|EFX58252.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 219

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ AT+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLATLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|300718065|ref|YP_003742868.1| octopine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299063901|emb|CAX61021.1| octopine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 228

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 83/159 (52%), Gaps = 10/159 (6%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIA 282
           FL  G P L+ I + Y        LG  + I  S + P     Y    +AL    AA+ +
Sbjct: 56  FLFRGTPLLIQIFMIYY------GLGNISAIRHSFLWPFLRDPYWCGLLALILNDAAYTS 109

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R G+ AVP G +EAA   G++     + + LP A+R  +P  +++ +++ K++SL  
Sbjct: 110 EILRGGIRAVPAGAIEAARVCGMSKFTILKRITLPIAVRQALPAYSNEVISMAKSTSLVS 169

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +   D+  +    ++ T +A+E+ +    IYL++S+++
Sbjct: 170 TISLMDVTGIANAEVSSTYRALEVFISAAVIYLAISLIV 208


>gi|293396872|ref|ZP_06641146.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291420343|gb|EFE93598.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 238

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI-ALKYQLH---FDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+LI +  + L+   F+ P+  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLILSDGFTLNLGLFELPI--QID-IENFEVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   +A+ ++ +R  L AVP+GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LALLYSAYASQTLRGALKAVPQGQWESGQALGLSKAAIFFRLIMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     +I   IYL ++++    + R+  + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAAAIYLLVTLLSQYVIKRIELRT 230

Query: 393 ALKEK 397
              E+
Sbjct: 231 TRFER 235


>gi|291457472|ref|ZP_06596862.1| permease protein of ABC transporter [Bifidobacterium breve DSM
           20213]
 gi|291381307|gb|EFE88825.1| permease protein of ABC transporter [Bifidobacterium breve DSM
           20213]
          Length = 366

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 141 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLIQIEVPQAVYA 200

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 201 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 229


>gi|190891145|ref|YP_001977687.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696424|gb|ACE90509.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 263

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)

Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LVLI A  Y   F+  V G +         P+++   I L+   +A++AEI R  +++
Sbjct: 100 PHLVLIFATTYIFPFEIVVFGNY------LPFPDWLKAVIGLAIPASAYVAEITRGAILS 153

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P  Q EAA  LG +  +A R ++LPQ +R  +PP  +   ++   +SLA  VG  +L+ 
Sbjct: 154 IPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLH 213

Query: 352 V---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 T + +    I   ++ M  + +L   IA    RL  +
Sbjct: 214 AATDASTAVRRLDFTIIAYIVVMAAFFTLCYPIARLTRRLERR 256



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF----- 146
           GF+    ++ S M   T++GT+ G  +L   + V +    YV+ FRN P LV+IF     
Sbjct: 52  GFLMNVVISLSAMTLGTVVGTIFGILQLMPYRPVRYPVVAYVQAFRNAPHLVLIFATTYI 111

Query: 147 FLYKSVL--SVLPIPD 160
           F ++ V+  + LP PD
Sbjct: 112 FPFEIVVFGNYLPFPD 127


>gi|66046194|ref|YP_236035.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256901|gb|AAY37997.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 225

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGAEIIRSALINVSQGQRDALRALDFGPISAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 202


>gi|117928847|ref|YP_873398.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidothermus cellulolyticus 11B]
 gi|117649310|gb|ABK53412.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Acidothermus cellulolyticus 11B]
          Length = 559

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 84/167 (50%), Gaps = 18/167 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           T  +I V SF L I  S+     RLS+    +      LL+   +++ G P L+      
Sbjct: 19  TAVEITVISFALAIPPSIAVALMRLSKWRSVRV-----LLWPYVWVMRGTPLLL------ 67

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           QL F   +L    F     VSP F +  IAL     AF  EI++ G+ AV   Q EA +A
Sbjct: 68  QLLFWFDILPTLGF----RVSP-FTTAVIALVLNEIAFSGEIIKGGISAVKSAQREAGLA 122

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           LG++       V+LPQA RSI P L+++ + +LKN+SLA  +   +L
Sbjct: 123 LGMSRWTILHRVILPQAFRSIAPALSNELIIMLKNTSLASVIAVDEL 169


>gi|307706134|ref|ZP_07642953.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307618534|gb|EFN97682.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
          Length = 219

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ AT+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLATLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|229844866|ref|ZP_04465004.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           6P18H1]
 gi|229812247|gb|EEP47938.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           6P18H1]
          Length = 221

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 8/172 (4%)

Query: 228 LIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           L+ GLP ++++ L Y       + + G++   G       F     ALS   AA+ ++ +
Sbjct: 53  LLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFGA------FGCGVFALSLIFAAYASQTL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G
Sbjct: 107 RGAIQAIPTGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 167 VDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|330812508|ref|YP_004356970.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380616|gb|AEA71966.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 226

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 73/134 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +  +A+     A+  EI+R+G+ A+PRGQ+EAA AL ++  +A R V+L  A+  + 
Sbjct: 89  EWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQLEAAAALAMSRFEAFRHVVLLPALGKVW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L+SQ + ++  S++   +   +L      I ++  +A E   +   IYL ++++I  F
Sbjct: 149 PALSSQIIIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYALTTLIYLCMALLIRQF 208

Query: 385 MNRLNAKIALKEKK 398
           +N +  +   K   
Sbjct: 209 LNWVGRRCLYKSSN 222


>gi|291561847|emb|CBL40647.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SS3/4]
          Length = 219

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 68/115 (59%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++P GQ EAA  LG T  +    ++LPQ ++ I+P +T++ + L+K+
Sbjct: 102 AAYFAEIYRSGIQSMPIGQYEAAQILGYTKAQTFFKIILPQVIKRILPSITNEVITLVKD 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SL+  +  A++ ++   +       I  +   +F Y+  ++++A+ M  +  K+
Sbjct: 162 TSLSFTLSVAEMFTIAKALAASQTNMIPFVAAGIFYYV-FNLIVAVVMEWIEKKL 215


>gi|282857470|ref|ZP_06266702.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Pyramidobacter piscolens W5455]
 gi|282584689|gb|EFB90025.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Pyramidobacter piscolens W5455]
          Length = 150

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 10/130 (7%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+  + A+++EI+R   +AV RGQ+EAA ++ LT  +  RL+++PQA+   +P + + 
Sbjct: 24  LTLALNSGAYMSEIIRGAFLAVDRGQIEAAKSINLTRMQTLRLIVIPQAVPVAVPGIVNN 83

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM---IALFMNR 387
            ++ +K SSLA  +G  D+ +V      Q G    I   +   Y+S+ IM   I L + +
Sbjct: 84  LIDAIKGSSLAFTIGILDITAVAKI---QAG----ITFRYFEAYMSMVIMYWLIVLALEQ 136

Query: 388 LNAKIALKEK 397
           L  +   K K
Sbjct: 137 LQKRCEDKLK 146


>gi|218892769|ref|YP_002441638.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|218772997|emb|CAW28809.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 214

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 73/128 (57%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y AA+  E+VR G+++VP     AA +LGL++R+    ++LP A R   P   + 
Sbjct: 91  LVLGVYAAAYCTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L+++K++SL + +G  +L+    TI+ +  + + ++ I   +Y  +S +IA    RL A
Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVIA----RLGA 206

Query: 391 KIALKEKK 398
           ++  + ++
Sbjct: 207 RLERRWQQ 214


>gi|324992109|gb|EGC24031.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK405]
 gi|324994203|gb|EGC26117.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK678]
 gi|325693722|gb|EGD35641.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK150]
 gi|327459420|gb|EGF05766.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327472828|gb|EGF18255.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 225

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 23/185 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247
           + S +LG +  +  T      H K  + L   Y+    I  +P LVL+ L Y     +FD
Sbjct: 34  IISLILGTIFGIIMTS-----HSKVVRFLSRAYLE--FIRVMPQLVLLFLVYFGLARNFD 86

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             + G+             +S  I  S +  A + ++VR  + ++P+ Q E+  ALGL+ 
Sbjct: 87  INISGE-------------LSAIIVFSLWGTAEMGDLVRGAITSLPKHQFESGQALGLSQ 133

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    +++PQ +R ++P   +    ++K +SL V +G  ++V VG  II+    +I   
Sbjct: 134 RQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQIIDSNRLSIPSA 193

Query: 368 LIWMF 372
             W++
Sbjct: 194 AFWIY 198


>gi|158423461|ref|YP_001524753.1| polar amino acid ABC transporter permease [Azorhizobium caulinodans
           ORS 571]
 gi|158330350|dbj|BAF87835.1| polar amino acid uptake family ABC transporter permease protein 1
           [Azorhizobium caulinodans ORS 571]
          Length = 252

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 69/124 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+LS +  A+  EI RSGL AVPR   EAA ALG T     R VLLP A+R  +P L + 
Sbjct: 120 ISLSLFAGAYNVEIFRSGLEAVPRTTSEAAEALGYTRIGVYRHVLLPLALRICLPALNNN 179

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NLLK ++LA A+   + + V   I N +     ++++ + +Y  L  ++   M+R   
Sbjct: 180 LVNLLKTTTLAYAIAVPETLYVSKQIWNDSQNVPVMMVVLLLVYTGLVGILVYIMHRWER 239

Query: 391 KIAL 394
            +A+
Sbjct: 240 ALAI 243


>gi|302337440|ref|YP_003802646.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634625|gb|ADK80052.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 217

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 54/97 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    I ++    AFI+EI+R  + A+PRG  EA  +LGL+     R  +LPQA+R  
Sbjct: 86  PAFFCGLIGVALNEGAFISEIIRGYIEALPRGDWEAGESLGLSRFSVIRYAILPQALRDS 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +P +T Q   ++K++SL   +  ++L     +I  +T
Sbjct: 146 VPAVTGQISIIIKDTSLFSMIMISELTRTANSIYTRT 182


>gi|257876302|ref|ZP_05655955.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257810468|gb|EEV39288.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 214

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 25/176 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP L ++       FD+                 F +  IA    
Sbjct: 60  RGTPLLLQLIFVFYGLPILGIV-------FDR-----------------FEAALIAFIIN 95

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R G+ ++P GQ EAA  L L+  +  + +++PQ ++  +P + ++ +NL+K
Sbjct: 96  YAAYFAEIFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVK 155

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL   +G +D++ +G   + +    + ++ + + IYL ++ +  L + ++  K+
Sbjct: 156 DTSLVYILGLSDVMRIGKIAMERDSTLLPLVGVGL-IYLVMTGVFTLLLKQIETKL 210


>gi|148545554|ref|YP_001265656.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|167031322|ref|YP_001666553.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|148509612|gb|ABQ76472.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|166857810|gb|ABY96217.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|313496644|gb|ADR58010.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 230

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265
           KT    PL ++  F   L+ G+P L+ + L Y   F    +G  N +G +   P      
Sbjct: 41  KTSPLKPLQWLGGFYSTLVRGVPELLWVLLIY---FG--TVGLMNSLGEALNMPGLELSA 95

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  T +     ++   IYL L+++    M
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLTVLAMTGM 215

Query: 386 NRLNAKIA 393
           + +  + A
Sbjct: 216 HFMEKRAA 223


>gi|33595380|ref|NP_883023.1| putative permease component of ABC transporter [Bordetella
           parapertussis 12822]
 gi|33565458|emb|CAE40091.1| putative permease component of ABC transporter [Bordetella
           parapertussis]
          Length = 216

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 73/123 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   +AA+++E  RSG++ V RGQ+EAA +LG+   ++   ++LPQA+R   P + ++
Sbjct: 90  LALLLCSAAYLSENFRSGILGVDRGQIEAAQSLGMGAARSLFRIILPQAIRIAAPTMGTR 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           Y+ L+K++SLA  +    L  +   I + T + +E+ +I   +Y  ++ M+      + +
Sbjct: 150 YIALMKDTSLASTITVVKLTKMAEQIGSNTFRYMEMFIIAGALYWVINQMLTFIQVWVES 209

Query: 391 KIA 393
           K+ 
Sbjct: 210 KLG 212


>gi|115360582|ref|YP_777719.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115285910|gb|ABI91385.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 240

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261
           +LSRH   ++ + L  LY + F   G+P L++I   Y  +F    L    GQ+    G  
Sbjct: 47  KLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFI 98

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P F+   +A+   + A+ AE+ R+ ++AV +G++EAA A+G+      R +L+PQ +R
Sbjct: 99  GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARAIGMPRAMVLRRILVPQVLR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +   LK+S+L    G A+L+       + T Q     +    +YL ++ + 
Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYFVFFVAGGALYLVMTGLS 218

Query: 382 ALFMNRLNAKIALKEKK 398
               NR  A +    ++
Sbjct: 219 NRVFNRAEAIVGRSFRR 235


>gi|182438504|ref|YP_001826223.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326779150|ref|ZP_08238415.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces cf. griseus XylebKG-1]
 gi|178467020|dbj|BAG21540.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326659483|gb|EGE44329.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces cf. griseus XylebKG-1]
 gi|327187182|dbj|BAK08924.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus]
          Length = 213

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 72/134 (53%), Gaps = 1/134 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +TV P ++ + + L  + AA+ +E+ R+G+  VP+GQ EA  AL L+ R+  + V+LPQA
Sbjct: 80  TTVEPLYIGITV-LGVHYAAYTSEVYRAGIDGVPKGQWEACRALSLSPRRTWQAVILPQA 138

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R+++P L +  +++ K +     +   ++V        +     E+  +   I+L  S 
Sbjct: 139 VRNVLPALGNYAISMFKETPFLAVITVQEMVFEARKYGAEQFAYTEVFTLAGLIFLVASY 198

Query: 380 MIALFMNRLNAKIA 393
             +L M +L  ++ 
Sbjct: 199 PTSLLMRKLEKRLG 212


>gi|308513288|ref|NP_951856.3| amino acid ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39982669|gb|AAR34129.1| amino acid ABC transporter, permease protein [Geobacter
           sulfurreducens PCA]
          Length = 266

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 25/182 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP+L                       G T+ P   +  I L   
Sbjct: 110 RGTPLLLQLFFIYYGLPSL-----------------------GITLKP-ITAAVIGLGLN 145

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++ EI+R  + ++  GQ EAA ALG+T+ +  R V++PQ  + ++PP+ ++++ L+K
Sbjct: 146 YSAYLGEIIRGAIQSIDHGQTEAAKALGMTYGQTMRRVVIPQTYKRLMPPIGNEFIALIK 205

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++L   +   +L+     + N       ++L  + IYL  +        ++  +  + E
Sbjct: 206 DTALVSTIAMVELMRAADQMFNTYFNVTALVLAAV-IYLIFTTFFTFLFEKIEHRAGIYE 264

Query: 397 KK 398
           ++
Sbjct: 265 RR 266



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 50  NNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS-SYATAILVGFVNTFWLAFSGMIPAT 108
           +N E  N +  +    ER   E   G V +  D   +   +L G V T  L    M  + 
Sbjct: 29  DNSEAKNFTASV----ER---EKKPGYVTFLQDCLKFLPVLLKGAVMTLLLVLCTMFISP 81

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           I G L+  GR+S  + ++ +C   + +FR  P L+ +FF+Y
Sbjct: 82  IGGLLIALGRISTFRPLSALCWFVIWLFRGTPLLLQLFFIY 122


>gi|149925442|ref|ZP_01913706.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Limnobacter sp. MED105]
 gi|149825559|gb|EDM84767.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Limnobacter sp. MED105]
          Length = 332

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 52/86 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F  +   ++ ++AA++AE++R GL AVP GQ +AA ALGL   +    V+LPQA+R+ +P
Sbjct: 208 FTRVLFTIALFSAAYLAEVLRGGLQAVPAGQGQAAKALGLNRVQRNVHVVLPQAIRACLP 267

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            L + ++ L K  SL   V   +L  
Sbjct: 268 SLINSFVTLFKECSLVTIVALFELTG 293


>gi|256827732|ref|YP_003151691.1| amino acid ABC transporter membrane protein [Cryptobacterium curtum
           DSM 15641]
 gi|256583875|gb|ACU95009.1| amino acid ABC transporter membrane protein [Cryptobacterium curtum
           DSM 15641]
          Length = 212

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 50/79 (63%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++PRGQ EAA  LG T  +    ++LPQ  + I+P + ++ + L+K+
Sbjct: 94  AAYFAEIYRSGIQSIPRGQYEAAEVLGYTRGQTFMRIVLPQVFKRILPSMGNEVITLVKD 153

Query: 338 SSLAVAVGFADLVSVGGTI 356
           +SLA  +G  ++ +    I
Sbjct: 154 TSLAFVLGIMEMFTQAKAI 172


>gi|116696425|ref|YP_842001.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113530924|emb|CAJ97271.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 246

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E ++    ++ Y +AF A+ + +G+ AVPRGQ  AA+ALG   R A   ++LPQA+R   
Sbjct: 111 EALASVFGIALYASAFYAQELEAGIAAVPRGQFAAALALGFAPRAAWWRIVLPQALRIAA 170

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY----LSLSIM 380
            P+  Q+   +KN+SLA+A+GFA+L      +   T  A +   I   +Y    LSL  +
Sbjct: 171 RPMVGQFCQTIKNTSLAMAIGFAELSYTARQVETDTLMAFQAFGIATLLYAALILSLQAV 230

Query: 381 IALFMNRLN 389
               + RL 
Sbjct: 231 APALLRRLG 239


>gi|310767150|gb|ADP12100.1| arginine transporter permease subunit ArtQ [Erwinia sp. Ejp617]
          Length = 238

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 12/186 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           +ALP + +  F+ FG   L+LI        L F + PV  Q N I    VSP F+   IA
Sbjct: 55  RALPEILVVLFIYFGASQLLLILSDGFTINLAFVQIPV--QVN-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   +++ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+L
Sbjct: 111 LAILYSSYASQTLRGALQAVPLGQWESGQALGMKKSAVFLRLIVPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   D++    +I  +T +       W  I  ++ ++I LF  ++  +I
Sbjct: 171 VLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYVIAAAIYLVITLFSQQVLKRI 226

Query: 393 ALKEKK 398
            L+  +
Sbjct: 227 ELRATR 232


>gi|158321702|ref|YP_001514209.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158141901|gb|ABW20213.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 221

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 85/159 (53%), Gaps = 5/159 (3%)

Query: 243 QLHFDKPVLGQFNFI--GGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +L  + P+L Q  F+  G + V     E  S  I LS    +++AE  R GL AV + Q+
Sbjct: 60  ELSRNTPLLIQLYFLYFGLTKVGIVLSENTSAIIGLSFLGGSYMAEAFRGGLEAVSKFQI 119

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+ ++LGL+  +  R +++PQA+   +P + +  + LLK +S+  A+   DL++V   +I
Sbjct: 120 ESGLSLGLSKMQIVRHIMIPQAISFSVPAIGANCIFLLKETSIFGAISTLDLMNVTKDLI 179

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               Q  + +L+ +  YL + + ++ F+  L  K+   E
Sbjct: 180 GMYYQTFDSLLMLVVAYLIILLPLSFFLTWLERKVRYAE 218


>gi|330502656|ref|YP_004379525.1| arginine/ornithine ABC transporter permease [Pseudomonas mendocina
           NK-01]
 gi|328916942|gb|AEB57773.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           mendocina NK-01]
          Length = 229

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 12/168 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    ++P F++    L     A+++
Sbjct: 55  VIRGIPELVLILLIFFGGQDLVNRIAPLLGHEDYI---DINP-FVAGVGTLGFIYGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A G++  +    +L+PQ +R  IP +T+ +L L+K ++L  
Sbjct: 111 ETFRGAFMAIPKGQGEAGMAYGMSPLRVFLRILVPQMIRMAIPGITNNWLVLVKATALIS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
            VG  D+++   +  + T +    IL+   +YL   S+S+++  ++ R
Sbjct: 171 LVGLQDMMARAKSAGDATREPFIYILLVAAVYLAITSVSLLVLRYIER 218


>gi|156934640|ref|YP_001438556.1| arginine transporter permease subunit ArtQ [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156532894|gb|ABU77720.1| hypothetical protein ESA_02474 [Cronobacter sakazakii ATCC BAA-894]
          Length = 238

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L         L F   PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTIPLGFTSIPVQVQIDNF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +A+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALALLYSAYASQTLRGALKAVPHGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|326318472|ref|YP_004236144.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375308|gb|ADX47577.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 220

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 34/169 (20%)

Query: 188 KIFVFSFVLGIVLS----------LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           K+   SFV G++L           L   R     + +T + +P + +  F++F LP L  
Sbjct: 24  KLTALSFVPGVLLGMGVAMLRLFPLPPLRWVLTLYVETFRNIPSVALLIFIVFALPDL-- 81

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
              ++ + ++  V+                 L + L C  +AF A+ VRSG+  +P GQ+
Sbjct: 82  ---EFVIDYEPSVV-----------------LTLVLVC--SAFTADYVRSGINTIPGGQV 119

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           EAA++LG+   +    V+LPQA+RS++ P+TS  + L+ ++SLA  V F
Sbjct: 120 EAALSLGMRPARIIWSVVLPQALRSVVQPMTSLLIALMLSTSLASQVPF 168


>gi|307708311|ref|ZP_07644778.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus mitis NCTC 12261]
 gi|307615757|gb|EFN94963.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus mitis NCTC 12261]
          Length = 219

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYHIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFCLTLYISLIAIVLSTLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|295111595|emb|CBL28345.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Synergistetes bacterium
           SGP1]
          Length = 220

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 68/117 (58%), Gaps = 4/117 (3%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A+++EI+R   +AV RGQ+EAA ++ L+  +  RL+++PQA+   +P + +  ++ +K
Sbjct: 100 SSAYLSEIIRGAFLAVDRGQIEAAKSINLSRMQTLRLIVIPQAIPVAVPGIVNVLIDAIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389
            SSLA  +G  D+ +V       T +  E    +++++ FI L L  M   +  R+ 
Sbjct: 160 GSSLAFTIGILDITAVAKIQAGITFRYFEAYMAMVMMYWFIVLVLEQMQKRYEQRIK 216


>gi|251792008|ref|YP_003006728.1| arginine transporter permease subunit ArtQ [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533395|gb|ACS96641.1| histidine transport system permease protein HisQ [Aggregatibacter
           aphrophilus NJ8700]
          Length = 221

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 13/210 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFDK 248
           V S V G++LS+    L  +     GK + +L     L+ GLP ++++ L Y       +
Sbjct: 21  VCSLVAGLLLSMLFAVLEAN--RVVGKPMAVL---VALLRGLPEILVVLLVYFGSSEVVE 75

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            + G++   G       F     ALS   AA+ ++ +R  + A+P+GQ E+  ALGL+  
Sbjct: 76  MITGEYIEFGA------FGCGVFALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKG 129

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
                +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q      
Sbjct: 130 YTFLHIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTNTHQPFTWYG 189

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I   IYL ++++  + + +L  +    E++
Sbjct: 190 IAALIYLVVTLVSQVGIRKLELRFTRFERE 219


>gi|162148489|ref|YP_001602950.1| putative inner membrane amino-acid ABC transporter permease
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161787066|emb|CAP56653.1| putative inner membrane amino-acid ABC transporter permease
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 219

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP F S++I ++   A ++A+IV +GL  VP    +AA +LGLT R+A   V+ P 
Sbjct: 83  GVMVSP-FASVFIGMALNAAGYLADIVTTGLGRVPPLYHDAAASLGLTRRQAYMRVIFPH 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A++++ P L + +  ++  SS+A   G  DL      + + T + +E++L+   +Y  LS
Sbjct: 142 ALQTMAPALANHFQIMILGSSMASIFGVEDLTGRAYDVGSTTFRILEVMLVAGVLYALLS 201

Query: 379 IMI 381
           + +
Sbjct: 202 VAL 204


>gi|163868659|ref|YP_001609868.1| glutamate/aspartate transport system permease protein [Bartonella
           tribocorum CIP 105476]
 gi|161018315|emb|CAK01873.1| glutamate/aspartate transport system permease protein [Bartonella
           tribocorum CIP 105476]
          Length = 238

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+++     +L I  + +  A+ AEI+R+G+ +VP+GQ  A  ALG+T+ ++  +V+
Sbjct: 99  FLTGTSIGANKSAL-ITFTAFETAYFAEIMRAGINSVPQGQKYAGQALGMTYWQSMYIVI 157

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           LPQA R ++P   +Q + L ++++L  A+
Sbjct: 158 LPQAFRDMLPVFLTQVIILFQDTTLVYAI 186


>gi|148988973|ref|ZP_01820373.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147925470|gb|EDK76547.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
          Length = 219

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VPVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|295675492|ref|YP_003604016.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295435335|gb|ADG14505.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 238

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 69/122 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+++E+ R+G+ +VPRGQ+EAA  LGL   +    V+LPQA R++ P + + 
Sbjct: 93  IALGLNVGAYLSEVFRAGIQSVPRGQIEAAGILGLERAQIFVEVVLPQATRAVYPAIVNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LL  +SL  A+   +L      I ++T   ++   + +  YL LS +++    +L A
Sbjct: 153 LIQLLLGTSLLSAIALPELTGTATVINSRTLLYLQTFSVTLVAYLVLSNVLSWLAAQLGA 212

Query: 391 KI 392
           ++
Sbjct: 213 RL 214


>gi|168492768|ref|ZP_02716911.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|183576840|gb|EDT97368.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
          Length = 219

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VPVIKDTSLLYSV 162



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|291544977|emb|CBL18086.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus sp. 18P13]
          Length = 216

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 3/140 (2%)

Query: 256 FIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FI G  ++ E  F+++ I      AA+ AEI R G+ ++P GQ EAA  LG +  +    
Sbjct: 75  FIFGIRITNEYRFIAVIIGFVLNYAAYFAEIYRGGIQSIPVGQYEAAKVLGYSRAQCFGR 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQ ++ IIP LT++ + L+K++SL+ A+   ++ +    I              +F 
Sbjct: 135 IIMPQVIKRIIPALTNEIITLIKDTSLSFALAVPEMFTTAKAIAAADKTMTAFAAAGVFY 194

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           Y+  ++++A  M ++  K++
Sbjct: 195 YV-FNLLVAGIMRKVEQKLS 213


>gi|237801379|ref|ZP_04589840.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806662|ref|ZP_04593366.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024238|gb|EGI04295.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027776|gb|EGI07831.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 225

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ +EI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGSEIIRSALINVSKGQRDALRALDFGPVNAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  ++   GQ     LIW  + +   +M
Sbjct: 163 TSLVSLITLTDLTFTGSQLVTTLGQQ---TLIWSIVLICYFVM 202


>gi|225350816|ref|ZP_03741839.1| hypothetical protein BIFPSEUDO_02386 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158272|gb|EEG71514.1| hypothetical protein BIFPSEUDO_02386 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 218

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 34/219 (15%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           I VF  VL IV+ L      ++R          + +  +  PLL    FL FGLP L ++
Sbjct: 24  ISVFGIVLSIVVGLICASIEIARIPVLKQIVRVYIELSRNTPLLVQLYFLYFGLPKLGVV 83

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
               Q      ++G   F+GGS                   ++AE +R GL  +P  Q E
Sbjct: 84  WSAEQC----AIVG-LGFLGGS-------------------YMAEAMRGGLETIPTVQRE 119

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +A  LGL+  +    V++PQA+ + IP + +  + L+K SS+  A+  AD++ +   +I 
Sbjct: 120 SAYVLGLSQWQTLSRVVIPQAISTSIPGIVANVIFLIKESSVVSAIALADVMYMAKDLIG 179

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 E +L+ +  YL + + I+LF   L  +   + +
Sbjct: 180 MYYNTYESLLMLVVAYLVILLPISLFGTWLERRFDYERR 218


>gi|222080930|ref|YP_002540293.1| octopine ABC transporter [Agrobacterium radiobacter K84]
 gi|221725609|gb|ACM28698.1| octopine ABC transporter [Agrobacterium radiobacter K84]
          Length = 224

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 102/195 (52%), Gaps = 18/195 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLIALKYQLH 245
           ++ V +F  G+V+  FA  ++R+   + G  L  L +  +++F    P LV I   Y + 
Sbjct: 26  ELSVLAFAGGMVIG-FALAIARN---EGGPILSRL-VRAYVVFFTNTPQLVQI---YVIF 77

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P LG         V   F ++ I ++    A++ EI+R+GL +V + +++AA  LG+
Sbjct: 78  FGLPDLG--------VVFSPFAAVLIGMTLNAGAYLTEILRAGLASVHQEELDAAETLGM 129

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  ++ R V++P   R  +PPL++QY+ +   +S+A   G  +L      + + T ++IE
Sbjct: 130 SRLQSLRYVIVPHVFRVAMPPLSNQYILMTLGTSMAAVFGVEELTGRAFNVNSTTFRSIE 189

Query: 366 IILIWMFIYLSLSIM 380
           I      +Y+ ++ M
Sbjct: 190 IFTTIAGLYVVITFM 204


>gi|218507511|ref|ZP_03505389.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 219

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 24/137 (17%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA------- 278
           T ++ GLP L++I + Y               GG+         Y+ ++ + A       
Sbjct: 52  TTIVRGLPELLVILVVY--------------FGGTAAITALTGRYVEINAFAAGVAALMI 97

Query: 279 ---AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+ AEI R  +++VPRGQ+EAA +LGL   +    V+LPQ MR  +P   + +++L+
Sbjct: 98  VFGAYCAEIFRGAIMSVPRGQVEAARSLGLKPWQTWLFVILPQMMRVALPAYGNLWVSLV 157

Query: 336 KNSSLAVAVGFADLVSV 352
           K++SL   VG  D++ V
Sbjct: 158 KDTSLVSVVGLTDIMRV 174


>gi|295675885|ref|YP_003604409.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295435728|gb|ADG14898.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 229

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 16/189 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIST 226
           MFL   G    + T  T  K+ VFS  L  VL L   A +LS++   +    +  +Y  T
Sbjct: 1   MFLQGYGPLLLSGTWQT-VKLAVFSLALAFVLGLLGAAAKLSKN---RLSNGVGTVY--T 54

Query: 227 FLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIA 282
            L+ G+P LVL+ L +   Q+  +       + +G   +  + F++    L     A+  
Sbjct: 55  TLVRGVPDLVLMLLLFYSIQIWLNNLT----DAMGWDQIDIDPFVAGVAVLGFIYGAYFT 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +AVPRGQ+EA  A G+T  +    V+ PQ MR  +P + + +  ++K ++L  
Sbjct: 111 ETFRGAFLAVPRGQLEAGAAYGMTSWQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVS 170

Query: 343 AVGFADLVS 351
            +G AD+V 
Sbjct: 171 IIGLADVVK 179


>gi|260769233|ref|ZP_05878166.1| arginine ABC transporter permease protein ArtM [Vibrio furnissii
           CIP 102972]
 gi|260614571|gb|EEX39757.1| arginine ABC transporter permease protein ArtM [Vibrio furnissii
           CIP 102972]
          Length = 222

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F ++ +AL+  TAA+ +
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSKPWFCAM-VALALNTAAYSS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPDGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YLS++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGLFYLSVNGLLTLVFRQIERK 215


>gi|239947119|ref|ZP_04698872.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921395|gb|EER21419.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 218

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F  V+G++L++       A R   +F+    +  PLL   + + F  P ++++  K+ +
Sbjct: 31  IFGLVIGMLLAICKVNKNRALRFFANFYTSIFRGTPLLIQLSIIYFASPYIIVV--KFSV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F  G+          I+ S  + A+++E++R+G+ AV +GQ EAA AL 
Sbjct: 89  -----------FTAGA----------ISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +      + ++LPQA+++I P L ++ +NL+K S++   +G  DL+
Sbjct: 128 IPKFLIMKDIILPQAVKNIFPSLVNELVNLIKESAIISMLGEMDLM 173


>gi|253689673|ref|YP_003018863.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756251|gb|ACT14327.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 218

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL   +    V+ PQ
Sbjct: 80  GIDVSP-WTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 186


>gi|241766695|ref|ZP_04764536.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241362978|gb|EER58663.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 216

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   SP  ++  + L  Y++A++ EI R  + AVPRGQ EA+ +L +   +  R V+LPQ
Sbjct: 80  GVDTSP-LLAASVCLILYSSAYLCEIWRGCVEAVPRGQWEASASLAMGFTEQLRHVILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  I P     + ++K ++L   +GF ++   G  I N T
Sbjct: 139 ALRMGIAPTAGFSVQIIKGTALTSVIGFIEITKAGQLIANAT 180


>gi|16264003|ref|NP_436795.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|307300144|ref|ZP_07579929.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307316503|ref|ZP_07595946.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15140127|emb|CAC48655.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|306897701|gb|EFN28444.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306905033|gb|EFN35616.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 217

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 67/126 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + LS YTAAF AEIVR G+ +VP     AA +LG+T  +  R ++ P A R  +P
Sbjct: 87  FTTSGVVLSLYTAAFCAEIVRGGISSVPVTTRRAARSLGMTWWQDMRYIVAPLATRVSLP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 L ++K+S+L + +G  +L+     ++ +  + + I+LI   IY  LS  +A   
Sbjct: 147 SWIGLTLGVMKDSALVLWLGLVELLRASQILVTRLQEPLFILLICGAIYFLLSFPVARLG 206

Query: 386 NRLNAK 391
             L  +
Sbjct: 207 GYLEKR 212


>gi|258621394|ref|ZP_05716428.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258586782|gb|EEW11497.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
          Length = 246

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R
Sbjct: 112 VSP-FVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSSSMSFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             IP   + +L LLK ++L   +G  D+V +G
Sbjct: 171 HAIPGFGNNWLVLLKTTALVSIIGLEDMVRIG 202


>gi|222087816|ref|YP_002546354.1| nopaline ABC transporter [Agrobacterium radiobacter K84]
 gi|221725264|gb|ACM28420.1| nopaline ABC transporter [Agrobacterium radiobacter K84]
          Length = 222

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 24/137 (17%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA------- 278
           T ++ GLP L++I + Y               GG+         Y+ +S + A       
Sbjct: 52  TTIVRGLPELLVILVVY--------------FGGTAAITALTGRYVEISAFAAGVAALTV 97

Query: 279 ---AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+ AEI R  + ++P+GQ EAA++LGL   +   LV+LPQ +R  +P   + +++LL
Sbjct: 98  VFGAYCAEIFRGAIQSIPQGQTEAALSLGLASWQVWLLVILPQMIRVALPAFGNLWVSLL 157

Query: 336 KNSSLAVAVGFADLVSV 352
           K++SL   VG  D++ V
Sbjct: 158 KDTSLISIVGLTDIMRV 174


>gi|163839275|ref|YP_001623680.1| cystine transport system, permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162952751|gb|ABY22266.1| cystine transport system, permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 219

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 73/130 (56%), Gaps = 4/130 (3%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  IALS     + AE++R+ +++VP+GQ EA   +G++  ++   ++LPQA R  +PPL
Sbjct: 89  SAIIALSLNVGGYAAEVIRAAILSVPKGQWEAGHMIGMSRGQSLFRIILPQAARVSLPPL 148

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILIWMFIYLSLSIMIAL 383
           ++ +++L+K++SLA  +   +L      I   +       +E  L++  I L LS + + 
Sbjct: 149 SNTFISLIKDTSLASLILVTELFKESQKIAAVSRDFMVLYLEAALVYWVICLVLSTIQSQ 208

Query: 384 FMNRLNAKIA 393
              RL+  +A
Sbjct: 209 LAKRLDRYVA 218


>gi|72160709|ref|YP_288366.1| amino acid ABC transporter inner membrane subunit [Thermobifida
           fusca YX]
 gi|71914441|gb|AAZ54343.1| amino acid ABC transporter, inner membrane subunit [Thermobifida
           fusca YX]
          Length = 212

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYI----ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           P+L Q  F+   +++P  +S +      L  + AA+ AE+ RSG+ AVP GQ EA  AL 
Sbjct: 64  PLLVQLVFV--FSLAPNTLSAFTIGVAVLGVHYAAYTAEVYRSGIEAVPAGQWEACRALS 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +    V+LPQA+R +IPPL +  + + K++ L  A+   +L+     I     + +
Sbjct: 122 LPLHRTWGAVILPQAIRRVIPPLGNYLIAMFKDTPLLFAITVGELMYQASQIGGVYFRYL 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E + +    +L +S+  A+ + +L  + A
Sbjct: 182 EAMTLVGLFFLLVSVPSAILIRQLERRYA 210


>gi|294498829|ref|YP_003562529.1| sulfur-containing amino acid ABC transporter permease TcyM
           [Bacillus megaterium QM B1551]
 gi|295704151|ref|YP_003597226.1| sulfur-containing amino acid ABC transporter permease TcyM
           [Bacillus megaterium DSM 319]
 gi|294348766|gb|ADE69095.1| sulfur-containing amino acid ABC transporter, permease protein TcyM
           [Bacillus megaterium QM B1551]
 gi|294801810|gb|ADF38876.1| sulfur-containing amino acid ABC transporter, permease protein TcyM
           [Bacillus megaterium DSM 319]
          Length = 236

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 64/111 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS    A+++EI+RSGL+AV +GQ+EAA A+G+   ++ + ++ PQA    +P L + 
Sbjct: 106 IALSFTAGAYMSEIIRSGLLAVEKGQIEAAYAIGMNRFQSMKRIVFPQAFALSLPNLCNI 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++  L  SS+A  V   +L      + +   + +E  +    IY  L+++I
Sbjct: 166 FIGFLHTSSIAFIVSQKELNGAANIVASNNLKFLEAYIAAALIYWMLTMLI 216


>gi|266619128|ref|ZP_06112063.1| L-cystine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288869357|gb|EFD01656.1| L-cystine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 225

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 107/210 (50%), Gaps = 18/210 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG++L+ F T + R    K        Y+  ++I G P +V +   + + +  P +G
Sbjct: 30  SFALGMILA-FITAMCRISKNKLLSKTAQFYV--WVIRGTPMIVQL---FVIFYGLPKVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                     SP  +S  I L+    A+ +EI+R+ L ++P+GQ EA  ALG++  +   
Sbjct: 84  IM-------FSP-IVSAIIGLTISEGAYDSEIIRAALTSIPKGQWEACHALGMSKFQTLS 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIIL 368
            V++PQA    +P L + +++L+K++SL   +   ++  +G  I+  T +     +E+ L
Sbjct: 136 NVIIPQAALIAVPSLGNMFISLVKDTSLTAILTVREVFQIGQQIVAVTFEPLWIYLEVGL 195

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I++     LS +  +   +L   + +K++K
Sbjct: 196 IYLIYSTVLSQLQGVLERKLGKHMLVKDEK 225


>gi|149201667|ref|ZP_01878641.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144715|gb|EDM32744.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 247

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 5/150 (3%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPE-----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           QL+F    +G    I G    P+     F    I+LS +  A   EI R+G+ AVPR  +
Sbjct: 86  QLYFFYFAIGTVLRITGENGLPQPLISNFGWAIISLSLFAGALNVEIFRAGVEAVPRSTV 145

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALG T  +    ++LP A+R  +P L +  +NL+K ++LA A+   +L+ V   I 
Sbjct: 146 EAAEALGYTRLQIYTDIVLPLAVRVSLPALGTNLVNLVKTTTLAYAIAVPELLYVSAQIW 205

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++     E++ + +  Y+ L  ++   ++R
Sbjct: 206 SEDLNVREMMNVLLVSYVGLVAILVWVLHR 235


>gi|16119459|ref|NP_396165.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15161997|gb|AAK90606.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 216

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 10/165 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G+P L L+   Y   F  PVL       G  V P  +++  A + YTA F+ +I R 
Sbjct: 58  LIQGIPLLGLLMFFY---FGIPVLA------GKDV-PTVVAVGAAYTIYTAVFLGDIWRG 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV + Q EA   LGL+  +    ++ PQA R  +P      + L+KN+SLA  VG  
Sbjct: 108 GIQAVRQAQWEAGACLGLSWLQQFVHIIGPQAFRIALPATVGFLVQLIKNTSLASVVGLV 167

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   G  I   T Q + +  +   IY ++   +  +   L A++
Sbjct: 168 ELARAGQMISAGTFQPLLVYTLVAAIYFTICFPLTTWSRTLEARL 212


>gi|26987023|ref|NP_742448.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24981642|gb|AAN65912.1|AE016219_5 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 230

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265
           KT    PL ++  F   L+ G+P L+ + L Y   F    +G  N +G +   P      
Sbjct: 41  KTSPFKPLQWLGGFYSTLVRGVPELLWVLLIY---FG--TVGLMNSLGEALNMPGLELSA 95

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  T +     ++   IYL L+++    M
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLTVLAMTGM 215

Query: 386 NRLNAKIA 393
           + +  + A
Sbjct: 216 HFMEKRAA 223


>gi|170724086|ref|YP_001751774.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169762089|gb|ACA75405.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 231

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265
           KT    PL ++  F   L+ G+P L+ + L Y   F    +G  N +G +   P      
Sbjct: 41  KTSPLKPLQWLGGFYSTLVRGVPELLWVLLIY---FG--TVGLMNSLGEALNMPGLELSA 95

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKARILSRIILPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  T +     ++   IYL L+++    M
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIGVTVTKEPFTFYMVAACIYLGLTVVAMTGM 215

Query: 386 NRLNAKIA 393
           + +  + A
Sbjct: 216 HFMEKRAA 223


>gi|227512390|ref|ZP_03942439.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227084363|gb|EEI19675.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
          Length = 190

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 36/194 (18%)

Query: 193 SFVLGIVLSLFAT--RLSR----HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SF+  ++L LF T  ++SR    H+  +        +IS   + G+P LVL+ + Y    
Sbjct: 9   SFIGALILGLFLTLAQMSRFKLLHWSARA-------FIS--FMRGVPMLVLLFIIY---- 55

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F F  G+   P   +  IA +   +AF++E+ RS   AV RGQ EAA +LGL 
Sbjct: 56  -------FGF--GANALP---AAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLP 103

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R     V+ PQA +  IP L +  L+L K++SLA  +  +++      I       + I
Sbjct: 104 YRTVIAKVIFPQAFKIAIPALGNILLDLFKSTSLAAMITVSEMFMDAKIIAGAYQDYMSI 163

Query: 367 -----ILIWMFIYL 375
                I+ W F +L
Sbjct: 164 YIVMAIIYWFFCWL 177


>gi|126739644|ref|ZP_01755336.1| ABC transporter, membrane spanning protein (amino acid)
           [Roseobacter sp. SK209-2-6]
 gi|126719290|gb|EBA16000.1| ABC transporter, membrane spanning protein (amino acid)
           [Roseobacter sp. SK209-2-6]
          Length = 221

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 3/142 (2%)

Query: 254 FNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           +NF  I G  + P F S  + L+ YTAA +A + R G+ AV +    AA +LG+++ +  
Sbjct: 79  YNFAPILGLNLDP-FASGVVILAIYTAALVANVARGGIEAVGQPMRRAARSLGMSYWQDL 137

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V LP   R++ P      L ++K+S+L   +G+ +L+     +I +T +   I+ I  
Sbjct: 138 RYVALPIGGRAVFPAWVGVALGVMKDSALVSVLGYVELLKASQILITRTQEPFLILSIAG 197

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
             Y +LS  I+ +  RL  + A
Sbjct: 198 AFYFALSYPISRYAARLEQRWA 219


>gi|320547239|ref|ZP_08041532.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448127|gb|EFW88877.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 215

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL  V  GQ EA ++ G+TH +    ++ PQA R ++P + SQ+
Sbjct: 86  AFTVFTSAALAEIIRGGLNGVDHGQTEAGLSQGMTHFQIFIYIVFPQAFRKMLPAIISQF 145

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 146 VTVIKDTSLLYSV 158



 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +++F  ++ +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 12  ILQGLWLTLYISFISIVLSTIIGTILAVMRNGKNPVLRLISSIYIEFVRNVPNLLWIFII 71

Query: 149 Y 149
           +
Sbjct: 72  F 72


>gi|170693092|ref|ZP_02884253.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia graminis C4D1M]
 gi|170142090|gb|EDT10257.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia graminis C4D1M]
          Length = 219

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 8/148 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L +  PV G    I  S ++   + + +  +CYT+    E+ R+GL  V RGQ EAA 
Sbjct: 74  YVLFYVLPVYG----ITMSALTAGTVGIALHYACYTS----EVYRAGLNGVARGQWEAAC 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           AL L+  +    V+LPQA+R +IP L +  + + K++ +  A+   +L+     I ++T 
Sbjct: 126 ALSLSPWRTYSGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNIGSETF 185

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +E I +    +L +SI  A  + RL 
Sbjct: 186 RYLEPITLAGIFFLLISITFAQLVRRLE 213


>gi|170738480|ref|YP_001767135.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168192754|gb|ACA14701.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 248

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 70/117 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++LS + AAF  EI RSG+ AVPR  +EAA ALG T  KA   V+LP A+R  +P L + 
Sbjct: 120 VSLSLFAAAFNVEIFRSGIEAVPRTTVEAAEALGYTRAKAYLHVVLPLALRICLPALNNN 179

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +NLLK ++LA A+   + +     I +++   +E++L+ +  Y  L  ++   M+R
Sbjct: 180 LINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYGILVGILVWLMHR 236


>gi|171778292|ref|ZP_02919498.1| hypothetical protein STRINF_00340 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282992|gb|EDT48416.1| hypothetical protein STRINF_00340 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 218

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 58/102 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A + ++VR  L ++P+ Q+E+ +ALGL +R+    V++PQ +R ++P   + 
Sbjct: 90  IVFSMWGTAEMGDLVRGALTSLPKHQIESGLALGLNNRQLFIYVVMPQILRQLLPQAVNL 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
              ++K +SL V +G  ++V VG  II      +    IW++
Sbjct: 150 MTRMIKTTSLIVLIGVVEVVKVGQEIIEANRLTVPSTAIWIY 191


>gi|59712193|ref|YP_204969.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio
           fischeri ES114]
 gi|59480294|gb|AAW86081.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio
           fischeri ES114]
          Length = 246

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 22/159 (13%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIG----GSTVSPEF 266
           +  +++  LY  T ++ G+P LVL+ L +   Q+  +  +     +I      S    E+
Sbjct: 45  RWARSIATLY--TTIVRGIPDLVLMMLLFFGGQMLLNNGLYASNEWINEWMTNSNPDHEW 102

Query: 267 MSL---YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           +S    YI +S + A          A++AE  R  ++AV RG+MEAA A G++   A R 
Sbjct: 103 ISYLPDYIEISPFIAGVLTIGFIFGAYMAETFRGAIMAVDRGEMEAAKAYGMSGMMAFRR 162

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           +L PQ +R  +P   + +L LLK ++L   +G  D+V V
Sbjct: 163 ILFPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRV 201


>gi|46578803|ref|YP_009611.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603590|ref|YP_967990.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris DP4]
 gi|46448215|gb|AAS94870.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563819|gb|ABM29563.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232666|gb|ADP85520.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 225

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 59/86 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L   +AA+ ++I R  ++A+P+GQ++AA ALG++   A R ++LPQA+R  IP
Sbjct: 89  FTASCLVLGMASAAYQSQIFRGSILALPQGQLKAARALGMSDGAAIRSIVLPQALRLSIP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
             +++Y  LLK+S+LA  +G  ++++
Sbjct: 149 AWSNEYSILLKDSALAFVLGTPEIMA 174


>gi|307693895|ref|ZP_07636132.1| putative ABC-type polar amino acid transport system, permease
           protein [Ruminococcaceae bacterium D16]
          Length = 250

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 7/138 (5%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S  S   +++ +A     A + +EI R G+  VP+GQ EA   LG+T  +  R + L Q 
Sbjct: 111 SGESGRMLAVCVAFIINYACYFSEIYRGGIQGVPKGQQEAGQVLGMTKLQIFRHITLLQM 170

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-----Y 374
           ++ I+PP++++ + L+K++SLA  +   +++ +G + +   G +    L+W        Y
Sbjct: 171 IKRIVPPMSNEIITLVKDTSLARVIALQEVIWMGESFMK--GNSGIAGLVWPLFFTAVYY 228

Query: 375 LSLSIMIALFMNRLNAKI 392
           L  S ++ L + +L  K+
Sbjct: 229 LIFSGVVTLLLGQLEKKM 246


>gi|262173970|ref|ZP_06041647.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus
           MB-451]
 gi|261891328|gb|EEY37315.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus
           MB-451]
          Length = 229

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  IALS   A++ ++ +R  L AV RGQ EAA ALG+    A   ++LPQA+R
Sbjct: 87  ISP-FIAGVIALSLIFASYASQTLRGALKAVGRGQREAASALGIPPAHAFFRIVLPQAVR 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P L +Q+L LLK+++L   +G  DL+
Sbjct: 146 HALPGLMNQWLVLLKDTALVSLIGVTDLL 174


>gi|227329358|ref|ZP_03833382.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 218

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 7/136 (5%)

Query: 237 LIALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           L+ L  +L    P+L Q    F G    G  VSP + +  +AL+ +T+AF+ +I    + 
Sbjct: 52  LVHLYSELFQGTPLLMQLFLAFFGLALFGIDVSP-WTAAALALTLFTSAFLVDIWCGSVE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EA+  LGL   +    V+ PQAMR  I P     + ++K ++LA  +GF +L 
Sbjct: 111 ALPKGQWEASRCLGLDFGQTLYRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFIELT 170

Query: 351 SVGGTIINQTGQAIEI 366
             G  + N T Q  ++
Sbjct: 171 KAGTMLNNVTYQPFKV 186


>gi|27365436|ref|NP_760964.1| Arginine/ornithine ABC transporter permease AotQ [Vibrio vulnificus
           CMCP6]
 gi|37680521|ref|NP_935130.1| ABC-type arginine transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|320155822|ref|YP_004188201.1| arginine/ornithine ABC transporterpermease AotQ [Vibrio vulnificus
           MO6-24/O]
 gi|27361584|gb|AAO10491.1| Arginine/ornithine ABC transporter, permease protein AotQ [Vibrio
           vulnificus CMCP6]
 gi|37199269|dbj|BAC95101.1| ABC-type arginine transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|319931134|gb|ADV85998.1| arginine/ornithine ABC transporter, permease protein AotQ [Vibrio
           vulnificus MO6-24/O]
          Length = 246

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++   A R +LLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMSSALAFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             +P   + +L LLK ++L   +G  D+V VG      T
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRVGALAAGST 209


>gi|186473942|ref|YP_001861284.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196274|gb|ACC74238.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 543

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 49/70 (70%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAEI+R+G++ V RGQ+ A  ALG+T     R V+ PQA+R+I+P L ++ ++ LKNSS
Sbjct: 100 FIAEILRAGVLGVERGQLLAGQALGMTPSVLMRRVIAPQAIRAIVPALGNESVSALKNSS 159

Query: 340 LAVAVGFADL 349
           LA  +   +L
Sbjct: 160 LASVIAVDEL 169


>gi|2668596|gb|AAC71071.1| membrane protein [Pseudomonas aeruginosa PAO1]
          Length = 229

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +      L++  P LG  ++I    ++P F+S    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQGLLNWVAPQLGYDDYI---DLNP-FVSGVGTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA    G++HR+    + +PQ +R  IP  T+ +L L+K ++L   VG
Sbjct: 114 RGAFMAIPKGQGEAGYGYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178


>gi|49475424|ref|YP_033465.1| ABC transporter, permease protein [Bartonella henselae str.
           Houston-1]
 gi|49238230|emb|CAF27440.1| ABC transporter, permease protein [Bartonella henselae str.
           Houston-1]
          Length = 239

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 5/187 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           KT KA+  L+ S F    LP L+ + L Y       + VL  FN     +++  F++  +
Sbjct: 53  KTAKAIATLFSSVFR--SLPELLTLFLVYYGLQSVIQAVLDYFNIEIIFSINA-FIAGVL 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AAF  E+         +GQ EAA ALGL+       V+ PQ +R+ +P L++ +
Sbjct: 110 ALSMVLAAFSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRVVFPQLIRNALPGLSNNW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK++SL   +   DL+      +  T + +   L+   +YL  S   +  ++ L  +
Sbjct: 170 LTLLKDTSLVSTISLVDLMQQTNLAVAATNEPMLFYLVACLLYLLFSAFFSAILHYLETR 229

Query: 392 IALKEKK 398
             L  +K
Sbjct: 230 TQLGYQK 236


>gi|317404139|gb|EFV84587.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 227

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 24/164 (14%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL  + FLIFGL +                        G T+ P      +AL     A
Sbjct: 68  PLLIQAYFLIFGLSS-----------------------AGLTM-PIMAGAVLALVINIGA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  EIVR+G+ ++P+ Q+EA   L L+  +    V+L  A+  + P LTSQ++ L+  SS
Sbjct: 104 YTCEIVRAGIESIPKDQLEAGECLALSRLQVFWHVVLRPAVERVYPSLTSQFVLLMLASS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +  AVG  +L+ V   I + T +  E+ ++   +YL+LS ++ L
Sbjct: 164 IMSAVGAEELLGVANRIQSDTYRNFEVFIVLWGVYLALSWLMRL 207


>gi|292487796|ref|YP_003530671.1| arginine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292899026|ref|YP_003538395.1| arginine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198874|emb|CBJ45984.1| arginine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291553218|emb|CBA20263.1| Arginine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 238

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDK-----PVLGQFNFIGGSTVSPEFMSLYI 271
           +ALP + +  F+ FG   L LI+L      D      PV  Q N I    VSP F+   I
Sbjct: 55  RALPEILVVLFIYFGASQL-LISLSDGFTLDLAFVQIPV--QIN-IENFDVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   A++ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+
Sbjct: 110 ALAILYASYASQTLRGALQAVPLGQWESGQALGMKKSAIFLRLIVPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   D++    +I  +T +       W  I  ++ ++I LF  ++  +
Sbjct: 170 LVLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYMIAAAIYLVITLFSQQVLKR 225

Query: 392 IALKEKK 398
           I L+  +
Sbjct: 226 IELRATR 232


>gi|254255035|ref|ZP_04948352.1| ABC-type arginine transport system permease component [Burkholderia
           dolosa AUO158]
 gi|124899680|gb|EAY71523.1| ABC-type arginine transport system permease component [Burkholderia
           dolosa AUO158]
          Length = 293

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 11/215 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           K+ V S    +VL L A   ++    +  K+L   Y  T LI  +P LVL+ L +   Q+
Sbjct: 83  KLAVLSLAASLVLGL-AGAAAKLSTSRMLKSLGTFY--TTLIRAVPDLVLMLLLFYGIQI 139

Query: 245 HFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +       + +G   +  + F +  + L     A+  E  R   +AVPRGQ+EA  A 
Sbjct: 140 LLNDAT----DLLGREQIDIDPFAAGVVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAY 195

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R +L PQ MR  +P + + +  L+K ++L   +G AD+V         T   
Sbjct: 196 GMSGWRVFRRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTLDF 255

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L    IYL+++ M  + + RL+ + ++  ++
Sbjct: 256 FFFTLAAGAIYLAITTMSNVVLYRLDKRYSIGVRR 290


>gi|242280778|ref|YP_002992907.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123672|gb|ACS81368.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 218

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 62/105 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  +  A+IAEI R  + ++  GQMEAA ++G+++ +A   ++LPQA +  IP L +Q
Sbjct: 92  LALGIHNGAYIAEIFRGAIASISPGQMEAARSIGMSYPRAMVRIVLPQAFKRAIPSLGNQ 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           ++  LK+SSLA  +   +L+     + +     +E++ I    YL
Sbjct: 152 FIIALKDSSLASTITINELLLKSQQLASSNFMMMEMLTIAGVFYL 196


>gi|312171915|emb|CBX80172.1| Arginine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 238

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDK-----PVLGQFNFIGGSTVSPEFMSLYI 271
           +ALP + +  F+ FG   L LI+L      D      PV  Q N I    VSP F+   I
Sbjct: 55  RALPEILVVLFIYFGASQL-LISLSDGFTLDLAFVQIPV--QIN-IENFDVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   A++ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+
Sbjct: 110 ALAILYASYASQTLRGALQAVPLGQWESGQALGMKKSAIFLRLIVPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   D++    +I  +T +       W  I  ++ ++I LF  ++  +
Sbjct: 170 LVLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYMIAAAIYLVITLFSQQVLKR 225

Query: 392 IALKEKK 398
           I L+  +
Sbjct: 226 IELRATR 232


>gi|293193555|ref|ZP_06609825.1| amino acid ABC transporter, permease protein [Actinomyces
           odontolyticus F0309]
 gi|292819911|gb|EFF78913.1| amino acid ABC transporter, permease protein [Actinomyces
           odontolyticus F0309]
          Length = 219

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 8/170 (4%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIA 282
           + +P    IA  Y +L  + P+L Q  FI       G   S E  ++ I L     A++A
Sbjct: 44  YRIPVAAQIAAAYVELSRNTPLLVQLFFIYFGLPRVGIKWSGETCAI-IGLIFLGGAYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSGL ++   Q E++ ALGLT  +  R V LPQA+ + +PPL +  + L+K +S+  
Sbjct: 103 EALRSGLDSIATIQWESSAALGLTRTQTLRHVALPQAIATSVPPLAANVIFLIKETSVVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            V   DLV V   +I  +    E +++ +  YL + + +++    +  K+
Sbjct: 163 VVALPDLVYVAKDLIGMSYNTSEALILLVIAYLVILLPVSIAARLIEKKV 212


>gi|209544821|ref|YP_002277050.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532498|gb|ACI52435.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 517

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++ +I+LS   AA+  EI R+ L A+  GQ  A  ALG+T  +  R V+ PQA+R  +P
Sbjct: 380 FLAAWISLSINEAAYQVEINRAALQAIDPGQALAGDALGMTRMQVYRHVIFPQALRIALP 439

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           P  +++++L+K +SLA  +   +L++V  T IN
Sbjct: 440 PTINEFISLIKTTSLASVISLQELLAV--TQIN 470


>gi|158424304|ref|YP_001525596.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331193|dbj|BAF88678.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 231

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 70/135 (51%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   ++++    AF+ EI+R G  +V R Q EAA  +  +     RLV+LPQA R +
Sbjct: 95  PLFVVAAVSVTMIAGAFLGEIIRGGFNSVHRNQWEAAETMNFSLIDTIRLVVLPQAWRIV 154

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP    ++  +K+++LA  +G  +L  VG  + N+   A     + + +Y  +S  ++ 
Sbjct: 155 LPPAFGFFVMFIKDTALASQIGVIELTYVGKVLNNKGFSAALSFGVILIVYFLISYPLSR 214

Query: 384 FMNRLNAKIALKEKK 398
               L A++A    +
Sbjct: 215 LGAHLEARLASSRHR 229


>gi|312132395|ref|YP_003999734.1| hism3 [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772678|gb|ADQ02166.1| HisM3 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 219

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 25/194 (12%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A ++ R + E + +  PLL    FL FGLP L ++        +   +    F+GGS   
Sbjct: 51  ARQIVRIYIELS-RNTPLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS--- 101

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                           ++AE +R GL AVP  Q E A  LGLT  +    V+LPQA+ + 
Sbjct: 102 ----------------YMAEAMRGGLEAVPNVQRETAYVLGLTSTQIITRVILPQAVSTA 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP + +  + L K SS+  A+  AD++ +   +I       E + + +  YL + + I++
Sbjct: 146 IPGVVANVIFLFKESSVVSAIALADVMYMAKDLIGMYYSTYESLFVLVVAYLVILLPISI 205

Query: 384 FMNRLNAKIALKEK 397
           F   L  +   + +
Sbjct: 206 FGTWLERRFDYERR 219


>gi|149202380|ref|ZP_01879353.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144478|gb|EDM32509.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 275

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 6/174 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  Q+ +I GS + P     +    +AL+   A +  E
Sbjct: 102 IIRGTPLLLQIWLLY--YGLGSLFPQYPWIRGSELWPYLRQAWPYAVLALTLSYAGYEGE 159

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R G  +V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   
Sbjct: 160 VMRGGFASVQKGQLEAARAFGMPRFTIFRRIWLPQAIRNVLPTLGGETILQLKATPLVAT 219

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   ++ SV   +   T    E +L+   +Y+ ++ +IAL    +  ++  + +
Sbjct: 220 ITVIEIYSVSSRVRADTFIVYEPLLLLALVYMIIAGLIALMFRWIENRVPSRPR 273


>gi|107024071|ref|YP_622398.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|105894260|gb|ABF77425.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 226

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 14/149 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G++L+ F   L+R F  +  +A+   YI  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLLLA-FGAALTRLFGPRWAQAVVRFYI--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T  +A R
Sbjct: 84  --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
             +LPQA R  +P L++ +++L+K++SLA
Sbjct: 136 RAILPQAARVALPALSNSFISLVKDTSLA 164


>gi|270293189|ref|ZP_06199400.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279168|gb|EFA25014.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 219

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 51/73 (69%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQGFTSVQILYHIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|242238357|ref|YP_002986538.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130414|gb|ACS84716.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 222

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 60/104 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAARVLGLTKTQTFLRVILPPALQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SS+   V F +L      I ++T  + E+ L+    YL+LS+++
Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLFYLALSMLM 205


>gi|254449912|ref|ZP_05063349.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Octadecabacter antarcticus 238]
 gi|198264318|gb|EDY88588.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Octadecabacter antarcticus 238]
          Length = 219

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 72/127 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  + + + AE+ R+G+ A+P GQ EA+ A  LT R+    +++PQA+  +IP L + 
Sbjct: 93  VGLGLHYSTYTAEVYRTGIDAIPSGQWEASKATNLTARQTWVHIIIPQAIPPMIPALANY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ + K + L  A+   +L++   ++ N   + +E + +    +L++S+   + + +L A
Sbjct: 153 FVAMFKETPLLAAITVLELMNQARSVANYHYKYVEPMTMVGLFFLAVSVPSVILLRKLEA 212

Query: 391 KIALKEK 397
           + A  ++
Sbjct: 213 RYAPTDR 219


>gi|307132299|ref|YP_003884315.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine [Dickeya dadantii 3937]
 gi|306529828|gb|ADM99758.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Dickeya dadantii 3937]
          Length = 221

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 60/104 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EAA  LGL+  +    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAARVLGLSRAQTFTRVILPPALQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SS+   V F +L      I ++T  + E+ L+    YL+LS+++
Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLCYLALSMLM 205


>gi|91786596|ref|YP_547548.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91695821|gb|ABE42650.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 222

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 8/161 (4%)

Query: 230 FGLPTLVLIALKYQLHF-DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIA 282
           +G P    I   Y + F + P L Q  FI       G  +SP + ++ I +     A++ 
Sbjct: 46  YGPPWARRIVGAYVVFFTNTPQLVQIFFIFFALPDAGILLSP-YQAVLIGMVLNAGAYLT 104

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+G  +V + ++EAA  LG +  +  R V+LP   R + PPL++QY+ +   SS+A 
Sbjct: 105 EIQRAGFESVRQLELEAAETLGFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGSSMAA 164

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
             G  +L      I ++T ++IE+  +   +Y+ L+++  L
Sbjct: 165 VFGVEELTGRAYNINSETFRSIEVFSVAAVLYIVLTLIATL 205


>gi|257790427|ref|YP_003181033.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|317490080|ref|ZP_07948569.1| binding-protein-dependent transport system inner membrane component
           [Eggerthella sp. 1_3_56FAA]
 gi|325833821|ref|ZP_08166171.1| putative arginine ABC transporter, permease protein ArtQ
           [Eggerthella sp. HGA1]
 gi|257474324|gb|ACV54644.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|316910785|gb|EFV32405.1| binding-protein-dependent transport system inner membrane component
           [Eggerthella sp. 1_3_56FAA]
 gi|325485179|gb|EGC87651.1| putative arginine ABC transporter, permease protein ArtQ
           [Eggerthella sp. HGA1]
          Length = 217

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 68/116 (58%), Gaps = 5/116 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  EI R G+ ++PRGQ EAA  LG +  +    ++LPQ ++ I+P ++++ + L+K+
Sbjct: 99  AAYFGEIYRGGIQSIPRGQYEAAEVLGYSRFQTFMKIVLPQVVKRILPAMSNEIITLVKD 158

Query: 338 SSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +SLA  +G  ++ S    +  + ++     I  ++ W+F ++ + I++     RLN
Sbjct: 159 TSLAFVLGIMEMFSQAKAIAASQVSMLPYVIAGVIYWVFNFI-VEIILTRVEKRLN 213


>gi|298486824|ref|ZP_07004880.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298158691|gb|EFH99755.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 227

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 3/103 (2%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP  +Q + LLK 
Sbjct: 105 SAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPFMIPPTGNQLVELLKT 164

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +SL   +   DL   G  +I   GQ     LIW  + +   +M
Sbjct: 165 TSLVSLITLTDLTFTGSQLITTLGQQ---TLIWSIVLVCYFVM 204


>gi|239820511|ref|YP_002947696.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805364|gb|ACS22430.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 223

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++   AL+    A+ AEI R  L+AVP+ Q EAA  LGL+  +A   V+LPQA R  + 
Sbjct: 91  FLAGVAALALSFGAYAAEIARGALLAVPKTQREAARTLGLSRAQALWTVVLPQAARFALA 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           P  +Q + LLK +S+   VG  +L+         T +   + L    IYL+L+
Sbjct: 151 PFGNQSIVLLKQTSIVSIVGCDELMRKAAEASGATREPFTMYLAAACIYLALT 203


>gi|322831660|ref|YP_004211687.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321166861|gb|ADW72560.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 217

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 8/140 (5%)

Query: 233 PTLVLIALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           PTL  + L  +L    P+L Q    F G    G  VSP + +  +AL+ YT+A++ +I  
Sbjct: 49  PTL-FVRLYSELFQGTPLLMQLFLAFFGLGLFGINVSP-WTAAALALTLYTSAYLVDIWS 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ EA+  LGL   +    V+ PQA+R  I P     + ++K ++LA  +GF
Sbjct: 107 GSIAALPKGQWEASRCLGLNFGQTLWRVITPQALRIAIAPTVGFSVQVVKGTALASIIGF 166

Query: 347 ADLVSVGGTIINQTGQAIEI 366
            +L   G  + N T +  ++
Sbjct: 167 VELTKAGTMLNNVTYEPFKV 186


>gi|238762102|ref|ZP_04623075.1| Arginine transport system permease protein artQ [Yersinia
           kristensenii ATCC 33638]
 gi|238699830|gb|EEP92574.1| Arginine transport system permease protein artQ [Yersinia
           kristensenii ATCC 33638]
          Length = 238

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHF----HEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V + VLG+VL+ LFA   S  +    +  TG     + LP + +  F+ FG   L+++  
Sbjct: 19  VCALVLGLVLAMLFAVCESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78

Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L+ F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYMIAAAIYLVVTLL 218


>gi|330829215|ref|YP_004392167.1| histidine/lysine/arginine/ornithine ABC transporter permease
           [Aeromonas veronii B565]
 gi|328804351|gb|AEB49550.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           protein [Aeromonas veronii B565]
          Length = 230

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 68/137 (49%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N    S  S  +    +A +  TAA+ AEIVR  +  +PRGQ+EAA A G+T  +    +
Sbjct: 84  NSAAWSLFSEAWFCALLAFTLNTAAYTAEIVRGAVHNMPRGQIEAANAFGMTRWQTLTRI 143

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LP + R  +P  +++ + +L+ S++A  +   DL      I ++     E  L    +Y
Sbjct: 144 ILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARIINSRYYSPFEAFLTAGLLY 203

Query: 375 LSLSIMIALFMNRLNAK 391
           + L+ +I     +  A+
Sbjct: 204 MLLTFVIVWLFKKWEAR 220


>gi|306825909|ref|ZP_07459248.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432270|gb|EFM35247.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 240

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 13/171 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL---- 244
           I + + VL  + +LF   L + +  +  ++  L+Y++   I   P ++LI   Y L    
Sbjct: 23  IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLFPSL 79

Query: 245 --HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F K +   FN      + P + + +I  S  T   ++EI+RS ++ V +GQ+EAA A
Sbjct: 80  LNQFLKSIGSDFNIF---KLDPLYYA-FIIYSLMTVGSLSEILRSAILTVDKGQLEAAHA 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GLT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++ 
Sbjct: 136 IGLTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIA 186


>gi|152984149|ref|YP_001349489.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959307|gb|ABR81332.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 214

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 5/149 (3%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L  F  I G   S  F    + L  Y AA+  E+VR G+++VP     AA +LGL++R+
Sbjct: 71  LLNSFKSILGLDCS-AFAVACLVLGVYAAAYCTEVVRGGVLSVPPSVRRAARSLGLSYRQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LP A R   P   +  L+++K++SL + +G  +L+    TI+ +  + + ++ I
Sbjct: 130 DLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCI 189

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +Y  +S ++A    RL A++  + ++
Sbjct: 190 AGLVYYLMSWVVA----RLGARLERRWQQ 214


>gi|73542272|ref|YP_296792.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72119685|gb|AAZ61948.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 234

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 18/209 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
             F  VLG+V++L         H    K +   Y+S  ++ G P LV I   + +++  P
Sbjct: 44  MAFGLVLGMVVALMGIS-----HNPVLKGIARTYVS--IMRGTPLLVQI---FVVYYGLP 93

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G         + P    + + LS    A+++E +R  ++ + RGQ  AA +LGLT  +
Sbjct: 94  GIG-------VALEPTPAGV-LTLSLNVGAYLSESMRGAILGIARGQWLAAYSLGLTPGQ 145

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T Q + + L 
Sbjct: 146 TLRYVVGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQEVIAATYQPLPLYLA 205

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IY  LS  ++   + L  +++L  + 
Sbjct: 206 VAAIYWVLSTGLSGLQHVLERRLSLPGRH 234


>gi|319940742|ref|ZP_08015083.1| polar amino acid ABC transporter [Sutterella wadsworthensis
           3_1_45B]
 gi|319805802|gb|EFW02576.1| polar amino acid ABC transporter [Sutterella wadsworthensis
           3_1_45B]
          Length = 366

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 50/84 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F  + I ++ + AA++AE VR GL  + +GQ  AA +LG T R+  + V+LPQA+ +IIP
Sbjct: 226 FWRVAIGIALFQAAYMAETVRGGLQTISQGQYAAARSLGFTERQCYQYVILPQALVAIIP 285

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
              +  L+   ++SL   V   DL
Sbjct: 286 AFVNSLLSCFMDTSLVTVVSMYDL 309


>gi|160913600|ref|ZP_02076290.1| hypothetical protein EUBDOL_00076 [Eubacterium dolichum DSM 3991]
 gi|158434061|gb|EDP12350.1| hypothetical protein EUBDOL_00076 [Eubacterium dolichum DSM 3991]
          Length = 227

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 77/133 (57%), Gaps = 1/133 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           + VSP F+   I  S  + A+++EI+R+G+  + +GQ+EAA ALG++ +   + +++P A
Sbjct: 93  NNVSP-FVWALIVFSLNSGAYLSEIIRAGVEGIDKGQIEAAKALGVSRKDIAKDIVVPLA 151

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R+++P + ++++ L K +++   +G  D++     + ++     E +L+    Y  ++ 
Sbjct: 152 FRNVLPAVVNEFITLTKETAVVGVIGLHDMMYYSDAVTSKFYSFFEPLLVVFVAYYIMNK 211

Query: 380 MIALFMNRLNAKI 392
           +++L    +  K+
Sbjct: 212 VLSLLGKWVERKL 224


>gi|126668662|ref|ZP_01739613.1| amino acid ABC transproter, permease protein [Marinobacter sp.
           ELB17]
 gi|126626840|gb|EAZ97486.1| amino acid ABC transproter, permease protein [Marinobacter sp.
           ELB17]
          Length = 189

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A++AE +R+ +I V R Q EAA+++G+T+ +  R ++LPQA R  +P L + 
Sbjct: 62  MGLTLHFSAYMAESIRAAIIGVDRSQTEAALSIGMTNIQLMRRIVLPQATRVALPTLMNY 121

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +++++K +SLA  +G  +L  +G T    +G
Sbjct: 122 FIDMIKATSLAFTLGVTEL--MGATQKEASG 150


>gi|119383037|ref|YP_914093.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Paracoccus denitrificans PD1222]
 gi|119372804|gb|ABL68397.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 219

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 74/133 (55%), Gaps = 3/133 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I +  + A + AE+ R G+ AVPRGQ EAA A  LT R+    V+LPQA+  +
Sbjct: 86  PALTAGVIGMGLHYATYAAEVYRGGIEAVPRGQWEAAKATNLTTRQTWLHVVLPQAVPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI--WMFIYLSLSIMI 381
           IP + +  L + K + L  A+   +L++   ++ N + + +E + +   MF+ +SL  +I
Sbjct: 146 IPAMANYLLAMFKETPLLSAITVLELMNQAKSVANSSYRYVEPMTLVGVMFLVVSLISVI 205

Query: 382 AL-FMNRLNAKIA 393
            L ++ R   +I+
Sbjct: 206 GLRWLERRYGRIS 218


>gi|124027567|ref|YP_001012887.1| glutamate/aspartate transport system permease protein [Hyperthermus
           butylicus DSM 5456]
 gi|123978261|gb|ABM80542.1| glutamate/aspartate transport system permease protein [Hyperthermus
           butylicus DSM 5456]
          Length = 228

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 31/159 (19%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           E+  + +PLL I   + FGLP L                       G  + P   +  ++
Sbjct: 62  EEVIRGIPLLVIMFLVYFGLPEL-----------------------GVRLDP-LTAAVVS 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +   + A+ ++I+RS ++++P GQ EAA+ALG++  +A   V+ PQA R  IP L +Q+ 
Sbjct: 98  IGIRSLAYQSQIIRSAILSIPAGQWEAALALGMSPLEAFVNVIAPQAFRIAIPGLVNQFT 157

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             LK++S+A A+G A+       I  Q+    +IIL ++
Sbjct: 158 VDLKDTSIAYAIGVAE-------IFTQSVHVAQIILDYL 189


>gi|34496308|ref|NP_900523.1| histidine transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34102161|gb|AAQ58528.1| histidine transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 229

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 2/167 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T L+ G+P LVL+ L  Y L      + +   I    + P F+S  + L     A+  E 
Sbjct: 54  TTLVRGVPDLVLMLLIFYSLQIGMNKITEALRIEQIDLDP-FVSGIVTLGFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R   ++VP+GQ+EA IA G+T  +    V  PQ MR  +P +++ +  +LK ++L   +
Sbjct: 113 LRGAFLSVPKGQIEAGIAYGMTSWQVFHRVQFPQMMRFALPGISNNWQVMLKATALVSII 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G AD+V         T +     L+   IYL+L+ +    + +L  +
Sbjct: 173 GLADVVKASVDAGKSTYKVFFFTLVAGAIYLALTTLSNFVLAKLERR 219


>gi|26991430|ref|NP_746855.1| amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|24986503|gb|AAN70319.1|AE016673_4 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|313500660|gb|ADR62026.1| Amino acid ABC transporter, permease protein [Pseudomonas putida
           BIRD-1]
          Length = 219

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 89/166 (53%), Gaps = 9/166 (5%)

Query: 233 PTLVLIALKYQLHFDKP--VLGQFNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P+LV++    +L    P  +L Q+ + G  +V+     F +  +A++  TAA+ +EI+R 
Sbjct: 54  PSLVVV----ELGRGAPALILLQYFYFGLPSVNLTLTSFWAAALAMAYCTAAYTSEIIRG 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +V  GQ EAA  +GL    A R V+LPQA+R  +P L    + + + SSL   +   
Sbjct: 110 GIESVAAGQTEAAEVIGLNRFDALRFVILPQALRVALPSLLGFSIMMFQASSLCFTIALP 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++VS   +I + T + + ++++   +Y ++     L +  L  ++A
Sbjct: 170 EIVSRASSIGSSTFEYMPVLILAGLMYAAVCAPATLGVAALEKRLA 215


>gi|46190618|ref|ZP_00121272.2| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189438954|ref|YP_001954035.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|322689600|ref|YP_004209334.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691561|ref|YP_004221131.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|189427389|gb|ACD97537.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|291516169|emb|CBK69785.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|320456417|dbj|BAJ67039.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|320460936|dbj|BAJ71556.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 219

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 25/194 (12%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A ++ R + E + +  PLL    FL FGLP L ++        +   +    F+GGS   
Sbjct: 51  ARQIVRIYIELS-RNTPLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS--- 101

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                           ++AE +R GL AVP  Q E A  LGLT  +    V+LPQA+ + 
Sbjct: 102 ----------------YMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTA 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP + +  + L K SS+  A+  AD++ +   +I       E + + +  YL + + I++
Sbjct: 146 IPGVVANVIFLFKESSVVSAIALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISI 205

Query: 384 FMNRLNAKIALKEK 397
           F   L  +   + +
Sbjct: 206 FGTWLERRFDYERR 219


>gi|262278740|ref|ZP_06056525.1| ArtM protein [Acinetobacter calcoaceticus RUH2202]
 gi|262259091|gb|EEY77824.1| ArtM protein [Acinetobacter calcoaceticus RUH2202]
          Length = 221

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 26/206 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           FS +LG +L +  T           KAL  LY+    I  +P LVL+ + Y         
Sbjct: 32  FSAILGTILGVIMTS-----KNIAVKALCRLYLEAIRI--IPILVLLFVFY--------- 75

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             F F   +  + +F ++++ +  +     A + ++VR+ + ++ + Q ++A ALGLTH 
Sbjct: 76  --FGF--ATWFNWQFSAMWVCVVVFVLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHV 131

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A   V+ PQ+++ + P   + +  ++K SSLAV +G  +++ VG  II  +   +    
Sbjct: 132 QALVYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSAS 191

Query: 369 IWM--FIYLSLSIMIALFMNRLNAKI 392
           +W+  FI++ L  +I   ++RL A +
Sbjct: 192 LWIYGFIFI-LYFLICYPLSRLAAHL 216



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   +S+   ++ G   T  +AF  +  + I+GT++G    S N  V  +CR+Y+E  
Sbjct: 3   LDYLFQASHLERLMWGLWATAKIAFISVFFSAILGTILGVIMTSKNIAVKALCRLYLEAI 62

Query: 137 RNIPPLVVIFFLY 149
           R IP LV++F  Y
Sbjct: 63  RIIPILVLLFVFY 75


>gi|260461177|ref|ZP_05809426.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033211|gb|EEW34473.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 237

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 7/124 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPV----LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           G+P L+ I   Y L++   +    +G+F    G    P F +  +A+   + A+ AE+ R
Sbjct: 68  GVPDLLTI---YLLYYGGSIALTEIGKFFGSAGFVGLPTFATGVLAIGIISGAYQAEVYR 124

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
              +AV  GQ EA+ ALGL+  ++ RLV++PQ MR  +P L + +  +LK+S+L   +G 
Sbjct: 125 GAYLAVDLGQFEASKALGLSRFQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIGL 184

Query: 347 ADLV 350
            +L+
Sbjct: 185 VELM 188



 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 35/69 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
               +  A+L+    TF L+  G +   + G +   GRLS   L +W+ + Y  VFR +P
Sbjct: 11  GKGGWGGALLLAAGVTFALSVLGFLLGALFGAVAAGGRLSTRALPSWVAKGYGTVFRGVP 70

Query: 141 PLVVIFFLY 149
            L+ I+ LY
Sbjct: 71  DLLTIYLLY 79


>gi|317047528|ref|YP_004115176.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949145|gb|ADU68620.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 237

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLH-----FDKPVLGQF-NFIGGSTVSPEFMSLY 270
           + LP + +  F+ FG   L L+ L    H     F  PV  Q  NF     VSP F+   
Sbjct: 55  RGLPEILVVLFIYFGASQL-LLTLSDGFHINLGLFSIPVQVQIENF----DVSP-FLCGV 108

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+   +A+ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q
Sbjct: 109 IALAMLYSAYASQTLRGALKAVPVGQWESGQALGMKKSAIFFRLIMPQMWRHALPGLGNQ 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +   DL+    +I  +T +     L+   IYL +++     + R+ +
Sbjct: 169 WLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYLVAAAIYLIITLFSQAVLRRIES 228

Query: 391 KIALKEK 397
           +    E+
Sbjct: 229 RTTRFER 235


>gi|121607337|ref|YP_995144.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121551977|gb|ABM56126.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 234

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 12/182 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P L +     +G+P LV      QL  DK          G  VSP    L   L   
Sbjct: 55  RGVPDLVLMLLFFYGVPALV------QLALDKS-----GSDAGFDVSPLGAGLAT-LGLI 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
              ++ E  R  ++A+P+GQ+EAA A GL   +    ++LPQ  R  +P  T+ +L L+K
Sbjct: 103 FGGYLTETFRGAILAIPKGQIEAACAFGLGRLRIAWRIVLPQMARLALPGFTNTWLVLVK 162

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++L   +G  D++         T Q     L+   +YLS++ +  L +  L  + A   
Sbjct: 163 STALVSVLGLEDIMFRAKNAAQATRQPFTFFLLTAAVYLSITTVSMLALRWLERRGAHDT 222

Query: 397 KK 398
           ++
Sbjct: 223 RR 224


>gi|238928187|ref|ZP_04659947.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas flueggei ATCC 43531]
 gi|238884147|gb|EEQ47785.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas flueggei ATCC 43531]
          Length = 225

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 1/124 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             V P + +++I  +  T A + E+ RS L+A+P+GQ+EA    GL+  +    V+LPQA
Sbjct: 90  EAVDPFWYAVFI-FTLNTVALLTEVFRSALLAIPKGQLEAGAVCGLSEAETYLHVILPQA 148

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +   +P + +  +NL+K +SLA  +   D+++VG    +     IE  L    +YL L  
Sbjct: 149 LVVALPSIANITVNLIKGTSLAFLMTVKDIMAVGKVAASYGYNYIEAYLDVFIVYLILCT 208

Query: 380 MIAL 383
           ++ L
Sbjct: 209 IVQL 212


>gi|322374410|ref|ZP_08048924.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|321279910|gb|EFX56949.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 229

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 29/217 (13%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236
           ++T+   A + +FS  LGIV++ FA ++            PL Y+    I+   G P L+
Sbjct: 32  SMTLQVFALVLIFSIPLGIVVA-FALQVRWK---------PLHYLIDLYIWVMRGTPLLL 81

Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            LI + Y L    P +G + + +  +          IA     AA+ AEI R G+  +P+
Sbjct: 82  QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    
Sbjct: 129 GQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  N+    + + L    IYL +  ++ +   +L  K
Sbjct: 189 TAANRDASLVPMFLAGA-IYLIMIGLVTIVAKKLEKK 224


>gi|23464701|ref|NP_695304.1| permease protein of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|227546807|ref|ZP_03976856.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|23325266|gb|AAN23940.1| permease protein of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|227212769|gb|EEI80650.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
          Length = 248

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 24/178 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L ++        +   +    F+GGS                   
Sbjct: 95  PLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS------------------- 130

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R GL AVP  Q E A  LGLT  +    V+LPQA+ + IP + +  + L K SS
Sbjct: 131 YMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESS 190

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  A+  AD++ +   +I       E + + +  YL + + I++F   L  +   + +
Sbjct: 191 VVSAIALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISIFGTWLERRFDYERR 248



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 19/111 (17%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVN----TFW 98
           W    VY   +K                E  +G  P T D S+       FVN    T +
Sbjct: 9   WVAKTVYAQEKKR---------------EAKEGARPMTFDWSFVQRYAPFFVNGTLMTLF 53

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++  G++ A  +G +     ++   +   I R+Y+E+ RN P LV ++FLY
Sbjct: 54  ISVFGILLAIAVGLVCAGVEIARIPVARQIVRIYIELSRNTPLLVQLYFLY 104


>gi|325273127|ref|ZP_08139424.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324101732|gb|EGB99281.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 230

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265
           KT    PL ++  F   L+ G+P L+ + L Y   F    +G  N +G +   P      
Sbjct: 41  KTSSIKPLQWLGGFYSTLVRGVPELLWVLLIY---FG--TVGLMNTLGEALNMPGLELSA 95

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  T       ++   IYLSL+++    M
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIGVTVTKAPFTFYMVAACIYLSLTVIAMTGM 215

Query: 386 NRLNAKIA 393
             L  + A
Sbjct: 216 YFLEKRAA 223


>gi|296272602|ref|YP_003655233.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096776|gb|ADG92726.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 216

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 5/144 (3%)

Query: 236 VLIALKYQLHFDKPVLGQF--NFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLI 290
           +LI +  ++    P+L Q    F G S +     E+ +  +AL+ +T+AF+ EI    L 
Sbjct: 51  ILIKIYVEIFQGTPLLMQLYLAFFGLSLIGIDINEWTAASLALTLFTSAFLCEIWSGCLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ EAA  +GL + ++   V++PQ +R    P     + ++K ++LA  +GF +L 
Sbjct: 111 SVPKGQWEAAKTMGLNYYQSMIHVIIPQTIRVATAPTIGFSVQVVKGTALASIIGFIELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIY 374
             G  + N T +  ++  +   IY
Sbjct: 171 KAGTMLNNATFEPFKVFTMVAIIY 194


>gi|260889729|ref|ZP_05900992.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
 gi|260860335|gb|EEX74835.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
          Length = 218

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 58/97 (59%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           NF G   V   +M+  I      AA++ EI+RSG+ ++ +GQ EAA  LG ++ +    V
Sbjct: 78  NFGGYKIVLAPYMAATITFIINYAAYLVEIMRSGIESIDKGQHEAAKVLGYSYWQKIIYV 137

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +LPQA+R ++P L ++ + L+K++SL   +   +++ 
Sbjct: 138 ILPQAIRRVLPTLGNEAITLIKDTSLVYVLAVTEVMK 174


>gi|238026653|ref|YP_002910884.1| Polar amino acid ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237875847|gb|ACR28180.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 229

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 13/193 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTV 262
           +LS H   +  +AL   Y  T LI  +P LVL+ L +   Q+  ++      + +G   +
Sbjct: 39  KLSTH---RVLRALATAY--TTLIRSVPDLVLMLLLFYSIQIWLNQIT----DLLGWDQI 89

Query: 263 SPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             + F++  + L     A+  E  R   ++VPRGQ+EA  A G++  +    +L PQ MR
Sbjct: 90  DIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFTRILFPQMMR 149

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +  L+K ++L   +G AD+V         T +    IL+   +YL+++ + 
Sbjct: 150 FALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFKMFFFILVAALVYLAITTLS 209

Query: 382 ALFMNRLNAKIAL 394
            L + +L  + +L
Sbjct: 210 NLVLRQLERRYSL 222


>gi|226940536|ref|YP_002795610.1| amino acid ABC transporter, permease protein [Laribacter
           hongkongensis HLHK9]
 gi|226715463|gb|ACO74601.1| probable amino acid ABC transporter, permease protein [Laribacter
           hongkongensis HLHK9]
          Length = 219

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 16/201 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S  LG++L  FA  L R         L  LY+S   + G P LV I   + +++  P +G
Sbjct: 28  SMALGLLLG-FAIALVRLTRLPVLAPLAALYVSA--MRGTPLLVQI---FVIYYGLPGIG 81

Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +F+ +             +AL+   AA+++E +R  +  V  GQ +AA +LG +  ++ 
Sbjct: 82  IEFDPVTAGI---------LALTMNAAAYLSESMRGAIAGVSTGQWQAASSLGFSWWQSM 132

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++ PQA+R  +P L++  ++L+K++SL   +  ++L+     II QT Q + + L   
Sbjct: 133 RFIIAPQALRLAVPSLSNTLISLIKDTSLVSVITVSELMLATKEIIAQTYQPLPLYLAAA 192

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            IY  +S+       R+  ++
Sbjct: 193 GIYWLMSLAFEQVQKRVENRL 213


>gi|218506830|ref|ZP_03504708.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 116

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 52/85 (61%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL+ + ++ + EIVR  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P
Sbjct: 22  FSAGVLALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLP 81

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
              +    ++K S+L   +G A+L+
Sbjct: 82  AWVNTAAEMVKASTLLSVIGVAELL 106


>gi|146279204|ref|YP_001169362.1| Asp/Glu racemase [Rhodobacter sphaeroides ATCC 17025]
 gi|145557445|gb|ABP72057.1| Asp/Glu racemase [Rhodobacter sphaeroides ATCC 17025]
          Length = 219

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 79/148 (53%), Gaps = 5/148 (3%)

Query: 249 PVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           P+L Q  FI         + P  ++  I +  + A + AE+ R+G+  VPRGQ EAA A 
Sbjct: 66  PLLVQLYFIFYVLPDAGVLLPPLVAGVIGMGLHYATYAAEVYRAGIENVPRGQWEAARAT 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            LT  +  R V++PQA+  +IP L +  + + K + L  A+   +L++   ++ N + + 
Sbjct: 126 NLTAAQTWRHVIVPQAIPPMIPALANYLIAMFKETPLLSAITVLELMNQAKSVANSSYRY 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +E + +   ++L++S++  + +  L  +
Sbjct: 186 VEPMTLVGVLFLAMSLVSVVLLRWLEHR 213


>gi|25010743|ref|NP_735138.1| hypothetical protein gbs0688 [Streptococcus agalactiae NEM316]
 gi|77408350|ref|ZP_00785091.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77410781|ref|ZP_00787139.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77413503|ref|ZP_00789693.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|23095097|emb|CAD46332.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160447|gb|EAO71568.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77163160|gb|EAO74113.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77173031|gb|EAO76159.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|319744753|gb|EFV97095.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 216

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEI+R GL  V +GQ EA ++ G T+ +   +++ PQA R ++P + SQ+
Sbjct: 87  SFTIFTSAALAEIIRGGLNGVDKGQTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 147 VTVIKDTSLLYSV 159



 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T +++F  ++ +   GTL+   R S N +   I  +Y+E  RN+P L+ IF +
Sbjct: 13  LLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLLWIFII 72

Query: 149 Y 149
           +
Sbjct: 73  F 73


>gi|332180728|gb|AEE16416.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 211

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 67/122 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA+S   AA+ AEI R G+ +V +GQ EA   LG T  +    ++LPQ ++ I+
Sbjct: 81  RFTAAIIAMSVNYAAYFAEIYRGGIESVSKGQYEAGKVLGFTRLQTFFRIVLPQVIKRIL 140

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ + L+K+++LA  +G A+L  V     ++    + I +  +F +    I+ A+F
Sbjct: 141 PATGNEVITLVKDTALAQVIGVAELFRVAQNAASREFSTMPIFVAGVFYFFMNWIVSAVF 200

Query: 385 MN 386
           + 
Sbjct: 201 VR 202


>gi|307945341|ref|ZP_07660677.1| nopaline transport system permease protein NocQ [Roseibium sp.
           TrichSKD4]
 gi|307771214|gb|EFO30439.1| nopaline transport system permease protein NocQ [Roseibium sp.
           TrichSKD4]
          Length = 237

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 69/125 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  +ALS   +++ +E   S    +P+GQ E   ALGL+H K  RL+++PQ +R  +P
Sbjct: 104 FVAGVVALSFVFSSYASEAFLSAFRGIPQGQYEGGYALGLSHTKTMRLIIVPQLIRLALP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +L LLK+++L   VG  D++   G     T +      +   +YL L+++ +  +
Sbjct: 164 ALGNLWLVLLKDTALVSVVGLEDILREVGVAARNTKEPFLFFGLACVLYLILAMISSAGL 223

Query: 386 NRLNA 390
           +++  
Sbjct: 224 SKIEG 228


>gi|262274651|ref|ZP_06052462.1| arginine/ornithine ABC transporter permease protein AotQ [Grimontia
           hollisae CIP 101886]
 gi|262221214|gb|EEY72528.1| arginine/ornithine ABC transporter permease protein AotQ [Grimontia
           hollisae CIP 101886]
          Length = 233

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 26/218 (11%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           ++ V S V+ ++L L  T ++R    +  + +  LY  + ++ G+P LVL+ L +   Q+
Sbjct: 20  ELAVLSAVIAVLLGL-VTAMARLSKNRVARGVATLY--STVVRGVPDLVLMLLIFFGAQI 76

Query: 245 -----------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                      H++  V   FN         EF +    +     A++AE  R   +AV 
Sbjct: 77  MMNNISDWLYEHYEIDVF--FNI-------DEFTAGVSTIGFIFGAYMAETFRGAFLAVD 127

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EA  A G++     R V+ PQ MR  +P + + +L L+K ++L   +G AD+  + 
Sbjct: 128 RGQLEAGTAYGMSPWMIFRRVMFPQMMRHALPGIGNNWLVLVKTTALVSVIGLADMTRLA 187

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                   +  +  +    +YL ++ +  L + RL  K
Sbjct: 188 KEAAGAVNEPFKFFIPVAIVYLLITSVSELGLKRLERK 225


>gi|91783384|ref|YP_558590.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91687338|gb|ABE30538.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 279

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 10/130 (7%)

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           + L A+ Y L F  PV G         V P   F+     LS    A +AE +R G+ A+
Sbjct: 122 IALYAMLYLLPFYVPVFG--------VVIPFSPFVKAVAGLSLPVTANVAEAMRGGIEAI 173

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ E+A ALG    +  R V++PQA+  I+P + + +  L   SSLAV  G +D++SV
Sbjct: 174 PSGQWESARALGYRKNQILRYVIVPQAIPFIMPNMMTVFAMLFIGSSLAVVTGTSDVLSV 233

Query: 353 GGTIINQTGQ 362
             TI    G 
Sbjct: 234 ANTITASDGS 243


>gi|329937972|ref|ZP_08287454.1| amino acid ABC transporter transmembrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302929|gb|EGG46818.1| amino acid ABC transporter transmembrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 251

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 61/122 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AEIVR  L AV   Q E  +AL  T  +  R +LLPQA+  +IPP ++ 
Sbjct: 88  LALGLTYGAYGAEIVRGALGAVDPAQREGGVALNFTPWQRMRKILLPQAVPEMIPPFSNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL      +     ++ EI    + IY  ++ ++   M RL  
Sbjct: 148 LIELLKGTALVSVMGMGDLTFSAKLVRLALQESAEIYTYVLLIYFVIAFLLTRIMRRLER 207

Query: 391 KI 392
            +
Sbjct: 208 DL 209


>gi|329298495|ref|ZP_08255831.1| glutamine ABC transporter permease protein [Plautia stali symbiont]
          Length = 140

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 54/81 (66%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+IAEI R  ++++ +G  EA++A+GL+ R     V++P A+R +IP L +Q++  +K
Sbjct: 55  SGAYIAEITRGAILSINKGFKEASLAMGLSQRATLWYVIMPLALRRMIPALGNQWIISIK 114

Query: 337 NSSLAVAVGFADLVSVGGTII 357
           ++SL + +G A+L   G  II
Sbjct: 115 DTSLFIVIGVAELTRQGQEII 135


>gi|260597266|ref|YP_003209837.1| arginine transporter permease subunit ArtQ [Cronobacter turicensis
           z3032]
 gi|260216443|emb|CBA29557.1| Arginine transport system permease protein artQ [Cronobacter
           turicensis z3032]
          Length = 238

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 10/187 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L         L F   PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTIPLGFASIPVQVQIDNF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +A+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALALLYSAYASQTLRGALKAVPHGQRESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++    + R++ +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIDLR 229

Query: 392 IALKEKK 398
               E++
Sbjct: 230 ATRFERR 236


>gi|254500334|ref|ZP_05112485.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222436405|gb|EEE43084.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 226

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 23/160 (14%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+    F+ FGLP L    L YQ  F    L                   +ALS   +A
Sbjct: 70  PLIVQMFFVAFGLPLL----LGYQWPFWAHAL-------------------LALSLNFSA 106

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R+GL  +  GQ EAA ALGL        +L PQA+ ++ P L SQ++ L   + 
Sbjct: 107 YFAEILRAGLAGIGTGQSEAAAALGLPTWLGFSKILFPQAVAAMFPSLNSQFIFLFLTTG 166

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +   +G  DL   G  I +++ ++ E+      IY+ +++
Sbjct: 167 VISEIGVTDLTWAGLYIDSRSFRSFEVFFTLTVIYVLMAL 206


>gi|239831829|ref|ZP_04680158.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239824096|gb|EEQ95664.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 240

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 66/118 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +++ +E+  S   A+PRGQ E   A+GL+H +  R V+LPQ +R  +P L + 
Sbjct: 109 VALGFVFSSYSSEVFLSAFRAIPRGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANL 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +L LLK++SL   +  +D++         T +      I   +YL L+I+ + F++R+
Sbjct: 169 WLVLLKDTSLVSVITLSDILRQTSIAARVTKEPFLFFGIACLLYLVLAIISSYFIDRI 226


>gi|157803317|ref|YP_001491866.1| succinate dehydrogenase flavoprotein subunit [Rickettsia canadensis
           str. McKiel]
 gi|157784580|gb|ABV73081.1| succinate dehydrogenase flavoprotein subunit [Rickettsia canadensis
           str. McKiel]
          Length = 218

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 87/166 (52%), Gaps = 29/166 (17%)

Query: 191 VFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +F  V+G++L++      +A R   +F+    +  PLL   + + F  P +V   +K+ +
Sbjct: 31  IFGLVIGMLLAICKVNKNYALRFFANFYTSIFRGTPLLIQLSIIYFASPYIV--GIKFSV 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F  G+          I+ S  + A+++E++R+G+ AV +GQ EAA AL 
Sbjct: 89  -----------FTAGA----------ISFSLNSGAYVSEVIRAGINAVDKGQFEAAEALA 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +      + ++LPQA+++I P L ++ ++L+K S++   +G  DL+
Sbjct: 128 IPRYLIMQDIILPQAVKNIFPSLVNELVSLIKESAIISMLGEIDLM 173


>gi|325293914|ref|YP_004279778.1| nopaline ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
 gi|325061767|gb|ADY65458.1| nopaline ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 228

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 5/153 (3%)

Query: 251 LGQFNFIGGSTVSPEFMS-----LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           LGQ  FI G+ ++   +S       +A++  TAA+ +EI+R GL++VP G  EAA A G+
Sbjct: 76  LGQIGFIKGNAITWWVISDGARCAVMAMALNTAAYTSEILRGGLLSVPAGLKEAAKATGM 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R +  P A+R  +P   ++ + ++K +SLA  +   ++      +++QT    E
Sbjct: 136 SPFMRFRRIEFPLAIRQALPAYGNELILVVKGTSLASTITVLEITGYAKRLMSQTFAIFE 195

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  +   IYL +++ + + +  L A +   E +
Sbjct: 196 VFALAGAIYLVINLTLVMLIRMLEAHLMRHEAR 228


>gi|197334943|ref|YP_002156403.1| membrane protein [Vibrio fischeri MJ11]
 gi|197316433|gb|ACH65880.1| membrane protein [Vibrio fischeri MJ11]
          Length = 246

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 29/205 (14%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIG----GSTVSPEF 266
           +  +++  LY  T ++ G+P LVL+ L +   Q+  +  +     +I      S    E+
Sbjct: 45  RWARSIATLY--TTIVRGIPDLVLMMLLFFGGQMLLNNGLYASNEWINEWMTNSNPDHEW 102

Query: 267 MSL---YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           +S    YI +S + A          A++AE  R  ++AV RG+MEAA A G++   A R 
Sbjct: 103 VSYLPDYIEISPFIAGVLTIGFIFGAYMAETFRGAIMAVDRGEMEAAKAYGMSGMMAFRR 162

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +L PQ +R  +P   + +L LLK ++L   +G  D+V V       T             
Sbjct: 163 ILFPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSSMAAGTTKMPFT-------F 215

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           Y++++ +  LF       + L E+K
Sbjct: 216 YMTVACIFLLFTAVSTGALKLIERK 240


>gi|160936779|ref|ZP_02084145.1| hypothetical protein CLOBOL_01669 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440271|gb|EDP18017.1| hypothetical protein CLOBOL_01669 [Clostridium bolteae ATCC
           BAA-613]
          Length = 219

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 68/115 (59%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++P GQ EAA  LG +  +    ++LPQ ++ I+P +T++ + L+K+
Sbjct: 102 AAYFAEIYRSGIQSMPVGQYEAAQILGYSRFQTFFKIILPQVIKRILPSVTNEVITLVKD 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +  A++ S+   +       I  +   +F Y+  ++++A+ M  +  K+
Sbjct: 162 TSLAFTLSVAEMFSIAKALAASQTNMIPFVAAGLFYYI-FNLVVAVGMEWVEKKM 215


>gi|187477189|ref|YP_785213.1| amino acid ABC transporter permease [Bordetella avium 197N]
 gi|115421775|emb|CAJ48286.1| amino acid ABC transporter, permease protein [Bordetella avium
           197N]
          Length = 222

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 15/129 (11%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YI  F  F  P LVL+ L Y   F  P LG + +         +  ++ +A     A++ 
Sbjct: 65  YIDFFRAF--PPLVLLILVY---FGWPFLGIELD---------KLTAVIVAFVLNNASYY 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+G+ AVP+GQMEAA + GL   +A   V++PQA+R+++P L    + ++K +++A
Sbjct: 111 AEVFRAGIEAVPKGQMEAARSTGLGRGQALGFVVIPQAVRNVLPDLVGNSIEVVKLTTIA 170

Query: 342 VAVGFADLV 350
             V   +L+
Sbjct: 171 SVVALPELL 179


>gi|222081098|ref|YP_002540461.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725777|gb|ACM28866.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 222

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 49/74 (66%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI R+GL +V  GQ EAA ALG+T R+    ++LPQA R +IP  T++ + L K
Sbjct: 102 TSAYCAEIWRAGLQSVASGQWEAASALGMTTRRTLARIILPQAARRMIPAFTNRGVELAK 161

Query: 337 NSSLAVAVGFADLV 350
            +S+A  +   +L+
Sbjct: 162 MTSIASVITVQELM 175



 Score = 43.9 bits (102), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 7/81 (8%)

Query: 96  TFW-LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS--V 152
           T W LAFSG   A + G  +G  R S  K + W+   Y+EVFRN P LV + + Y +  V
Sbjct: 26  TLWALAFSG---ALVAGLFLGLARASTVKWINWLATGYIEVFRNTPVLVQLIWFYYAFPV 82

Query: 153 LSVLPIPDHSIVLPFGMFLNN 173
           L+   +   +     G+FLN 
Sbjct: 83  LTGWQMSSFTAA-ALGLFLNT 102


>gi|320546925|ref|ZP_08041227.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448443|gb|EFW89184.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 226

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 51/77 (66%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T   ++EI+RS L+ V +GQ+EAA+A+GLT ++A   ++ PQA++  +P L +  +NL+K
Sbjct: 108 TTGSLSEIIRSSLLTVNKGQLEAALAIGLTKKQAYLRIIFPQAIKQALPNLCNLVINLVK 167

Query: 337 NSSLAVAVGFADLVSVG 353
            +SL   +   D+ ++ 
Sbjct: 168 GTSLVFVMTVKDITAIA 184


>gi|170289917|ref|YP_001736733.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173997|gb|ACB07050.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 211

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 70/116 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A+I+E  R  ++++  GQ  AA A+G+   +    +++PQA+R  +P ++++ + +++
Sbjct: 93  SSAYISEYFRGAILSIDEGQSLAAKAIGMNETQEFLHIIVPQAIRRALPSISNEIVYMVQ 152

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            SSLA AVG  ++ SV  +  +   + +EI  I   IYLS++ ++ L   +L  ++
Sbjct: 153 YSSLAFAVGVQEVYSVAKSFNSLYFRPLEIFSILALIYLSMTALVTLAFRKLTERL 208


>gi|121602131|ref|YP_988959.1| putative glutamate/aspartate ABC transporter, permease
           protein/periplasmic glutamate/aspartate-binding protein
           [Bartonella bacilliformis KC583]
 gi|120614308|gb|ABM44909.1| putative glutamate/aspartate ABC transporter, permease
           protein/periplasmic glutamate/aspartate-binding protein
           [Bartonella bacilliformis KC583]
          Length = 460

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 45/58 (77%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           AL  +T+A IAE VRSG+ ++P GQ  AA+A+G T  ++ R +++P+A+R+I+PPLTS
Sbjct: 120 ALGFFTSARIAEQVRSGIESIPSGQRYAAMAIGFTTYQSYRYIMIPRAIRTILPPLTS 177



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV-----AWICRVYVEVFRN 138
           +Y   +L GF NT  L+ S +I A  +G ++G  R   N  V       I  ++VE+ RN
Sbjct: 28  TYLDTLLDGFKNTAVLSISSLILAVFVGVVIGTVRTLPNTSVINNTFRAIGGIWVEIMRN 87

Query: 139 IPPLVVIFFLYKSVLSVLP 157
           IP LV +F  Y  V  + P
Sbjct: 88  IPLLVQVFLWYFVVPKIYP 106


>gi|27365437|ref|NP_760965.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|27361585|gb|AAO10492.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus
           CMCP6]
          Length = 227

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           LGI + L   R SR++      +LP   YI  F   G P LV      QL+     + QF
Sbjct: 34  LGIAIPLAVARNSRNYV----VSLPAWGYIYFFR--GTPLLV------QLYLIYYGMDQF 81

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +  +     +    +A    T+A+ AEI+R  +  +P+G++EAA A G++H    R +
Sbjct: 82  FPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKGEVEAAKAYGMSHWMTYRRI 141

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LP A+R  +P  +++ + +L  S++A  V   DL      + ++     E  L     Y
Sbjct: 142 VLPSALRRALPAYSNEVIFMLHGSAVAGIVTIIDLTGAARLVNSRYYAPFESFLTAGLFY 201

Query: 375 LSLSIMI 381
           +SL+ +I
Sbjct: 202 MSLTFLI 208


>gi|116049209|ref|YP_791988.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254234384|ref|ZP_04927707.1| hypothetical protein PACG_00227 [Pseudomonas aeruginosa C3719]
 gi|254239633|ref|ZP_04932955.1| hypothetical protein PA2G_00250 [Pseudomonas aeruginosa 2192]
 gi|296390364|ref|ZP_06879839.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|115584430|gb|ABJ10445.1| putative amino acid ABC transporter permease [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126166315|gb|EAZ51826.1| hypothetical protein PACG_00227 [Pseudomonas aeruginosa C3719]
 gi|126193011|gb|EAZ57074.1| hypothetical protein PA2G_00250 [Pseudomonas aeruginosa 2192]
          Length = 214

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y AA+  E+VR G+++VP     AA +LGL++R+    ++LP A R   P   + 
Sbjct: 91  LVLGVYAAAYCTEVVRGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L+++K++SL + +G  +L+    TI+ +  + + ++ I   +Y  +S ++A    RL A
Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVA----RLGA 206

Query: 391 KIALKEKK 398
           ++  + ++
Sbjct: 207 RLERRWQQ 214


>gi|22536879|ref|NP_687730.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76786730|ref|YP_329463.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798200|ref|ZP_00780451.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|22533729|gb|AAM99602.1|AE014224_5 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76561787|gb|ABA44371.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76586463|gb|EAO62970.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
          Length = 216

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEI+R GL  V +GQ EA ++ G T+ +   +++ PQA R ++P + SQ+
Sbjct: 87  SFTIFTSAALAEIIRGGLNGVDKGQTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 147 VTVIKDTSLLYSV 159



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T +++F  ++ +   GTL+   R S N +   I  +Y+E  RN+P L+ IF +
Sbjct: 13  LLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLLWIFII 72

Query: 149 Y 149
           +
Sbjct: 73  F 73


>gi|331266483|ref|YP_004326113.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
 gi|326683155|emb|CBZ00773.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
          Length = 213

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 29/217 (13%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236
           ++T+   A + +FS  LGIV++ FA ++            PL Y+    I+   G P L+
Sbjct: 16  SMTLQVFALVLIFSIPLGIVVA-FALQVRWK---------PLHYLIDLYIWVMRGTPLLL 65

Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            LI + Y L    P +G + + +  +          IA     AA+ AEI R G+  +P+
Sbjct: 66  QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    
Sbjct: 113 GQYEAAKVLKFSPFSTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  N+    + + L    IYL +  ++ +   +L  K
Sbjct: 173 TAANRDASLVPMFLAGA-IYLIMIGLVTIVAKKLEKK 208


>gi|311108430|ref|YP_003981283.1| L-cystine transporter permease TcyB [Achromobacter xylosoxidans A8]
 gi|310763119|gb|ADP18568.1| L-cystine transport system permease protein TcyB [Achromobacter
           xylosoxidans A8]
          Length = 249

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+ L+ F   L R F      AL   Y+  +LI G P LV +   + + +  P +G
Sbjct: 53  SFALGLALA-FVVALIRLFGPAPLVALVRFYV--WLIRGTPLLVQL---FVIFYGLPSVG 106

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  +    A+ +E++R  + ++ +GQ EAA +L +T  +A R
Sbjct: 107 --------IVLDPLPAALIGFTLNVGAYNSEVIRGAIESITKGQWEAAYSLSMTRAQALR 158

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ ++ L+K++SLA  +   ++      I   T + + +      
Sbjct: 159 RTILPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAAL 218

Query: 373 IYLSLSIMIALFMNRLNAK 391
           IYL  S +++    RL  +
Sbjct: 219 IYLVFSSVLSAAQVRLERR 237


>gi|257056921|ref|YP_003134753.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586793|gb|ACU97926.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 236

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 9/156 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + ++F  P+L  F  +      P +  + + L     A+ AEIVR  + AVP+ Q E A+
Sbjct: 69  FWIYFVLPILTGFQLL------PLWAGI-VVLGLNFGAYGAEIVRGAVQAVPKEQHEGAV 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQ 359
           AL  +  +  R V+LPQA+  ++PP  + ++ LLK +SL   +   ++      ++    
Sbjct: 122 ALNFSTSQRLRRVILPQALVEMMPPFNNLFIQLLKGTSLLTFITVPEMTHQAQVVLVPAY 181

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           TG+   I  I +  YL +SI+I L M  L    ++K
Sbjct: 182 TGEVALIFSILLVFYLLVSIVITLVMRGLERWASVK 217


>gi|162149590|ref|YP_001604051.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|161788167|emb|CAP57772.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 538

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++ +I+LS   AA+  EI R+ L A+  GQ  A  ALG+T  +  R V+ PQA+R  +P
Sbjct: 401 FLAAWISLSINEAAYQVEINRAALQAIDPGQALAGDALGMTRMQVYRHVIFPQALRIALP 460

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           P  +++++L+K +SLA  +   +L++V  T IN
Sbjct: 461 PTINEFISLIKTTSLASVISLQELLAV--TQIN 491


>gi|170016650|ref|YP_001727569.1| amino acid ABC transporter permease [Leuconostoc citreum KM20]
 gi|169803507|gb|ACA82125.1| Amino acid ABC transporter, permease protein [Leuconostoc citreum
           KM20]
          Length = 232

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 72/121 (59%), Gaps = 3/121 (2%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  T A+ AE +R+ + +VP  Q EAA +LG++  +  R ++LPQA R  IPPL++  ++
Sbjct: 109 SLNTGAYAAESIRAAITSVPAVQKEAAESLGMSPFQVYRHIILPQAARISIPPLSNSLIS 168

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL---FMNRLNA 390
           LLK++SLA  +   ++  +   I  +  + + + L+   +Y +++ ++++   ++ R  +
Sbjct: 169 LLKDTSLASVITIVEMFYLSQQIAAENYKILSMYLLVALVYAAMTTILSIGQHYLERYTS 228

Query: 391 K 391
           +
Sbjct: 229 R 229


>gi|49081868|gb|AAT50334.1| PA0889 [synthetic construct]
          Length = 230

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +      L++  P LG  ++I    ++P F+S    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQGLLNWVAPQLGYDDYI---DLNP-FVSGVGTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA  A G++HR+    + +PQ +R  IP  T+ +L L+K ++L   VG
Sbjct: 114 RGVFMAIPKGQGEAGYAYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178


>gi|239834533|ref|ZP_04682861.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822596|gb|EEQ94165.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 216

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 11/152 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV + L Y L    PV+G  N        P  ++  + +   ++A+++EI R  +I
Sbjct: 63  GVPLLVQLLLCYYLL---PVIG-INV-------PALVAAVVTVGICSSAYVSEIWRGAII 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA A+G+  R     ++LPQA R  +P L ++ + L+K SSL   VG  ++ 
Sbjct: 112 ALPPGQAEAATAIGMGPRDIWTRIILPQAARLSLPALVNEMILLVKASSLVSVVGILEVT 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
                    T + +E+ +    IYL +++ +A
Sbjct: 172 RASQAQAATTFRPLEVYVAAACIYLLINLCLA 203


>gi|227113605|ref|ZP_03827261.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 218

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL   +    V+ PQ
Sbjct: 80  GIDVSP-WTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AMRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKV 186


>gi|86357101|ref|YP_468993.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86281203|gb|ABC90266.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 260

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 10/161 (6%)

Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LVLI A  Y   F+  V G +         P+++   I L+   +A++AEI R  +++
Sbjct: 97  PHLVLIFATTYIFPFEIVVFGNY------LPFPDWLKAVIGLAIPASAYVAEITRGAILS 150

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P  Q EAA  LG +  +A R ++LPQ +R  +PP  +   ++   +SLA  VG  +L+ 
Sbjct: 151 IPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLH 210

Query: 352 V---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                 T + +    I   ++ M  + +L   IA    RL 
Sbjct: 211 AATDASTAVRRLDFTIIAYIVVMAAFFTLCYPIARLTRRLE 251



 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF----- 146
           GF+    ++ S M   T++GT+ G  +L   + V +    YV+ FRN P LV+IF     
Sbjct: 49  GFLMNVVISLSAMTLGTVVGTIFGILQLMPYRPVRYPVVAYVQAFRNAPHLVLIFATTYI 108

Query: 147 FLYKSVL--SVLPIPD 160
           F ++ V+  + LP PD
Sbjct: 109 FPFEIVVFGNYLPFPD 124


>gi|315613064|ref|ZP_07887975.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315315174|gb|EFU63215.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 213

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 29/217 (13%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF---GLPTLV 236
           ++T+   A + +FS  LGIV++ FA ++            PL Y+    I+   G P L+
Sbjct: 16  SMTLQVFALVLIFSIPLGIVVA-FALQVRWK---------PLHYLIDLYIWVMRGTPLLL 65

Query: 237 -LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            LI + Y L    P +G + + +  +          IA     AA+ AEI R G+  +P+
Sbjct: 66  QLIFIYYVL----PSIGIRLDRLPAAV---------IAFVLNYAAYFAEIFRGGIETIPK 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    
Sbjct: 113 GQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASR 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  N+    + + L    IYL +  ++ +   +L  K
Sbjct: 173 TAANRDASLVPMFLAGA-IYLIMIGIVTIVAKKLEKK 208


>gi|260461091|ref|ZP_05809340.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033125|gb|EEW34387.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 218

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 7/148 (4%)

Query: 238 IALKYQLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           IA   ++  + P L Q  F F G    G  + P  ++  +A++   AA+  EIV +GL A
Sbjct: 53  IACYVEVMRNTPFLVQLFFIFFGLPSLGIRLDP-ILAAMLAMTLNMAAYTIEIVGAGLDA 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ EAA+ALGL  R+    ++LPQA++ I P LTSQ + ++  S++   +   +L  
Sbjct: 112 VPGGQTEAALALGLRPRQVFIKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSI 379
               +  +T ++ E   +   +YL LS+
Sbjct: 172 EADMLQARTFRSFETYFVVTLVYLLLSM 199


>gi|239620787|ref|ZP_04663818.1| permease protein of ABC transporter system [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|239516363|gb|EEQ56230.1| permease protein of ABC transporter system [Bifidobacterium longum
           subsp. infantis CCUG 52486]
          Length = 264

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 24/178 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L ++        +   +    F+GGS                   
Sbjct: 111 PLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS------------------- 146

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R GL AVP  Q E A  LGLT  +    V+LPQA+ + IP + +  + L K SS
Sbjct: 147 YMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESS 206

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  A+  AD++ +   +I       E + + +  YL + + I++F   L  +   + +
Sbjct: 207 VVSAIALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISIFGTWLERRFDYERR 264



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 19/111 (17%)

Query: 43  WCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVN----TFW 98
           W    VY   +K                E  +G  P T D S+       FVN    T +
Sbjct: 25  WVAKTVYAQEKKR---------------EAKEGARPMTFDWSFVQRYAPFFVNGTLMTLF 69

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           ++  G++ A  +G +     ++   +   I R+Y+E+ RN P LV ++FLY
Sbjct: 70  ISVFGILLAIAVGLVCAGVEIARIPVARQIVRIYIELSRNTPLLVQLYFLY 120


>gi|152996347|ref|YP_001341182.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Marinomonas
           sp. MWYL1]
 gi|150837271|gb|ABR71247.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Marinomonas sp. MWYL1]
          Length = 220

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 65/123 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     ++  E+VR  + +VP+GQ EA+IAL  T  +    +++PQA+ ++IPP  + 
Sbjct: 88  VALGLNIGSYGTEVVRGAIQSVPKGQYEASIALNFTSSQRLWRIIMPQALVNMIPPFGNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K +SL   +   DL      + + T Q  EI  + +  Y  ++  +  F+ RL  
Sbjct: 148 AIELVKATSLVSLITIGDLTFKAKMLADTTLQVGEIFGVVLLFYFVMAQFLVFFIRRLET 207

Query: 391 KIA 393
            ++
Sbjct: 208 HLS 210


>gi|77405937|ref|ZP_00783017.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77175448|gb|EAO78237.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 216

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEI+R GL  V +GQ EA ++ G T+ +   +++ PQA R ++P + SQ+
Sbjct: 87  SFTIFTSAALAEIIRGGLNGVDKGQTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 147 VTVIKDTSLLYSV 159



 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           +L GF  T +++F  ++ +   GTL+   R S N +   I  +Y+E  RN+P L+ IF
Sbjct: 13  LLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLLWIF 70


>gi|212716829|ref|ZP_03324957.1| hypothetical protein BIFCAT_01772 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660114|gb|EEB20689.1| hypothetical protein BIFCAT_01772 [Bifidobacterium catenulatum DSM
           16992]
          Length = 218

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 24/178 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L ++    Q      ++G   F+GGS                   
Sbjct: 65  PLLVQLYFLYFGLPKLGIVWSAEQC----AIVG-LGFLGGS------------------- 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R GL  +P  Q E+A  LGL+  +    V++PQA+ + IP + +  + L+K SS
Sbjct: 101 YMAEAMRGGLETIPNVQRESAYVLGLSQWQTLSRVVIPQAISTSIPGVVANVIFLIKESS 160

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  A+  AD++ +   +I       E +L+ +  YL + + I+LF   L  +   + +
Sbjct: 161 VVSAIALADVMYMAKDLIGMYYSTYESLLMLVVAYLVILLPISLFGTWLERRFDYERR 218


>gi|54288386|gb|AAV31674.1| predicted abc-type amino acid transport system permease component
           [uncultured alpha proteobacterium EBAC2C11]
          Length = 227

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 3/123 (2%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  +TAA++AE+ R  + +V +GQ EA+ AL + +    R V+ PQA++  I P     
Sbjct: 100 ALVLFTAAYLAEVWRGAVESVAKGQWEASYALNIKYSLLLRKVIFPQAIKFGIAPTVGFM 159

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIALFMNRL 388
           + ++K +SLA  +GF DL+  G    N      E  +++     +Y  +   +ALF  +L
Sbjct: 160 VQIIKGTSLAYIIGFNDLMLAGKRWANAPVPGSEPFVVFPLMAVMYFCICYPLALFARKL 219

Query: 389 NAK 391
            AK
Sbjct: 220 EAK 222


>gi|92114719|ref|YP_574647.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91797809|gb|ABE59948.1| amino acid ABC transporter membrane protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 243

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 23/167 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSC 275
            AL +L+IS F   G P LV + L Y   +  P L  F   I G T +       + L+ 
Sbjct: 72  NALAMLFISFFR--GTPLLVQLFLFY---YGLPQLLTFLVAINGITAT------ILGLTL 120

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + +A++AE +R+ ++ V R Q EAA+++G+T  +  R ++LPQA R   P L + +++++
Sbjct: 121 HFSAYMAESIRAAIVGVDRSQTEAALSIGMTQGQLMRRIVLPQATRVATPTLMNYFIDMI 180

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           K +SLA  +G  +L  +G T     G          F+Y    +M+A
Sbjct: 181 KATSLAFTLGVTEL--MGATQKEAAGS---------FLYFEAFLMVA 216


>gi|70729727|ref|YP_259466.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344026|gb|AAY91632.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 215

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A RLS  F  +    L  +YIS F   G P LV + L   L+F  P +G         + 
Sbjct: 40  AARLSGFFLLR---CLARVYISVFR--GTPCLVQLFL---LYFGGPQIGL-------ELE 84

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  I L    AA++AE +R  +  V  GQ+EAA ++G    +   L+ LPQ  + +
Sbjct: 85  P-FSAGVIGLGLNIAAYMAESIRGAISNVDPGQVEAARSIGFGKGQTLWLITLPQTAKLM 143

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           I PL    + L+K S+L   +   +L       I+ T +  EI ++   +Y+++   + L
Sbjct: 144 IRPLGVNAVALIKGSALVSTISVVELSYTAQRFISSTYKPFEIFMVSAILYIAMVYTVRL 203

Query: 384 FMNRLNAKIALK 395
            ++ L+ + A K
Sbjct: 204 LVDHLDKRFAAK 215


>gi|319762273|ref|YP_004126210.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317116834|gb|ADU99322.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 220

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 4/126 (3%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L +AL C  +AF A+ +RSG+  +P  Q+EAA++LGL   +    V+LPQA+R+++ P+T
Sbjct: 93  LTLALVC--SAFTADYLRSGINTIPGSQIEAALSLGLRPMRIISAVVLPQALRAVVQPMT 150

Query: 329 SQYLNLLKNSSLAVAVGFA--DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           S  + L+ ++SLA  V F   +L ++   I   +   I    +   +Y++  ++IA    
Sbjct: 151 SLLIALMLSTSLASQVPFPGRELTALVSKIATDSAAGIPAFAVAAAMYVATGLLIAWAGA 210

Query: 387 RLNAKI 392
            L  K+
Sbjct: 211 ALEKKV 216


>gi|110668633|ref|YP_658444.1| ABC-type glutamine/glutamate/polar amino acids transport system,
           permease protein [Haloquadratum walsbyi DSM 16790]
 gi|109626380|emb|CAJ52839.1| ABC-type glutamine/glutamate/polar amino acids transport system,
           permease protein [Haloquadratum walsbyi DSM 16790]
          Length = 284

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 69/121 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L+   AA++ E VR G+ AVP GQMEAA +LG+ + +A R V++PQA R+ +  + + 
Sbjct: 155 LSLTLNHAAYVGEAVRGGIGAVPDGQMEAARSLGMGYVQAMREVVIPQAWRNALAAIGND 214

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SL   +   +L+     + + T      +L+    YLS+++ +   +  L  
Sbjct: 215 QIILVKDTSLLTVIAIPELIQQFRDVNSATFDPWTPLLLVAIAYLSITVPMGRLVEYLET 274

Query: 391 K 391
           +
Sbjct: 275 R 275


>gi|331695544|ref|YP_004331783.1| ectoine/hydroxyectoine ABC transporter permease EhuD
           [Pseudonocardia dioxanivorans CB1190]
 gi|326950233|gb|AEA23930.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Pseudonocardia dioxanivorans CB1190]
          Length = 218

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 56/95 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  + A + +E+ R+G+ AVPRGQ EAA AL L   +    V+LPQA+  ++P L + 
Sbjct: 94  LALGVHYATYTSEVYRAGIDAVPRGQWEAATALSLPTTRVWTGVVLPQAIPRVLPALGNY 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +++ K + L + +G  D+V     +  Q+ + +E
Sbjct: 154 VISMFKETPLLIGIGVLDIVGQAREVGGQSFRYVE 188


>gi|50122414|ref|YP_051581.1| putative amino acid ABC transporter permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|261822705|ref|YP_003260811.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|49612940|emb|CAG76391.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium atrosepticum SCRI1043]
 gi|261606718|gb|ACX89204.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 217

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL   +    V+ PQ
Sbjct: 79  GIDVSP-WTAAALALTLFTSAFLVDIWCGSVEALPKGQWEASRCLGLDFGQTLYRVIAPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           AMR  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 138 AMRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKV 185


>gi|302336124|ref|YP_003801331.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
 gi|301319964|gb|ADK68451.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
          Length = 748

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 52/74 (70%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A++AEI R+G+ ++P+GQ EAA +LG+   +    ++LPQ +R +IP +TS ++   K
Sbjct: 568 SSAYLAEIFRAGIQSIPQGQYEAAASLGMNRAQTMLSIILPQTVRRVIPTVTSDFITSYK 627

Query: 337 NSSLAVAVGFADLV 350
           ++SL  +VG  +L+
Sbjct: 628 DTSLLSSVGVMELM 641


>gi|238750305|ref|ZP_04611807.1| ABC-type amino acid transport system permease component [Yersinia
           rohdei ATCC 43380]
 gi|238711538|gb|EEQ03754.1| ABC-type amino acid transport system permease component [Yersinia
           rohdei ATCC 43380]
          Length = 249

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   AA++A  V++G++A+  GQ +A ++LG    +    V+LPQA+R +
Sbjct: 94  PEITTVVCALALIAAAYLAHAVKAGIVAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    IY  L + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVNELTFLATQVNNRSMVYPMEVFLFVALIYFVLCLALD 213

Query: 383 LFMNRLNAK 391
           +  N LN +
Sbjct: 214 VLANGLNRR 222


>gi|152978298|ref|YP_001343927.1| arginine transporter permease subunit ArtQ [Actinobacillus
           succinogenes 130Z]
 gi|150840021|gb|ABR73992.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 223

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 27/217 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S ++G++LS+F   L         K +    ++  L+ GLP ++++ L Y        
Sbjct: 21  VSSLIVGLILSMFFVMLETSKFACIRKPVS---VAITLLRGLPEIIVVLLIY-------- 69

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYT----------AAFIAEIVRSGLIAVPRGQMEAA 300
                  G + V  +    Y+  S ++          AA+ ++ +R  + A+  GQ E+ 
Sbjct: 70  ------FGSTEVVEKLTGEYVEFSAFSCGVAALSLIFAAYASQSLRGAIQAISLGQWESG 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL+       ++LPQ  R  +P L++Q+L LLK+++L   +G  D++     I   T
Sbjct: 124 AALGLSRGYTFMHIILPQMWRHALPGLSNQWLVLLKDTALVSLIGVNDIMRQTDLINTNT 183

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            Q          IYL ++++  +F+ RL  +    E+
Sbjct: 184 HQPFTWYGFAALIYLVITLISQVFIRRLEQRFTRFER 220


>gi|317404628|gb|EFV85028.1| amino-acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 249

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+ L+ F   L R F      AL   Y+  +LI G P LV +   + + +  P +G
Sbjct: 53  SFALGLALA-FVVALIRLFGPAPLVALVRFYV--WLIRGTPLLVQL---FVIFYGLPSVG 106

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  +    A+ +E++R  + ++ +GQ EAA +L +T  +A R
Sbjct: 107 --------VVLDPLPAALIGFTLNVGAYNSEVIRGAIESISKGQWEAAYSLSMTRGQALR 158

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ ++ L+K++SLA  +   ++      I   T + + +      
Sbjct: 159 RTVLPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAAL 218

Query: 373 IYLSLSIMIALFMNRLNAK 391
           IYL  S +++    RL  +
Sbjct: 219 IYLVFSSVLSAAQVRLERR 237


>gi|268319379|ref|YP_003293035.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
 gi|262397754|emb|CAX66768.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
          Length = 225

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 20/213 (9%)

Query: 185 TNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           T+  I V S ++G+ L +LF   + R    +  K +  +Y+  F +  +PT+VL+ L Y 
Sbjct: 24  TSVWIAVLSLIIGLALGALFG--VLRTSKSRLVKVIFRIYLEFFRM--VPTVVLLFLFYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +  QFN    ++V        IA + + +A  ++IVR  LI+VP+ Q E+ +AL
Sbjct: 80  I-----LPRQFNLNWPASVMA-----VIAFALWVSAEFSDIVRGALISVPKIQRESGLAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    VLLPQA +  +P   +    ++K +SL + +   D+++VG  I+    Q 
Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189

Query: 364 IEIILIWM-----FIYLSLSIMIALFMNRLNAK 391
               + W+     F+Y  +   ++L+  RL+ +
Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222



 Score = 43.5 bits (101), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T +L G   + W+A   +I    +G L G  R S ++LV  I R+Y+E FR +P +V++F
Sbjct: 16  TRLLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRMVPTVVLLF 75

Query: 147 FLY 149
             Y
Sbjct: 76  LFY 78


>gi|218659590|ref|ZP_03515520.1| octopine ABC transporter, permease protein [Rhizobium etli IE4771]
          Length = 241

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 16/221 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T+  +   F+   V+G +++    +LSRH   +      L    T ++ G+P L
Sbjct: 23  LTAAAMTIGVSVCGFLAGTVIGTMITFM--QLSRHMAIRW-----LADCYTTVLRGVPDL 75

Query: 236 VLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           ++I L Y      L     + G   FIG     P F++  +AL   +AA+ AE+ R    
Sbjct: 76  LVIYLFYFGGSAFLGSLGGLFGYQGFIG----MPAFLTGTLALGVVSAAYQAEVFRGAYR 131

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RG++EAA A+G+      R ++ P  +R  IP L + +  +LK S+L    G  +L+
Sbjct: 132 SVARGEIEAASAVGMRRWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALVSVTGLVELL 191

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                    T +  E  L+ + +YL ++   ++   R+ A+
Sbjct: 192 RQSQIAAGSTRRPFEFYLMAVVLYLVITWFSSILFRRMEAR 232



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 13/73 (17%)

Query: 90  LVGFVNTFW-------------LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +VGF  T W             ++  G +  T+IGT++   +LS +  + W+   Y  V 
Sbjct: 10  IVGFGQTGWGWLLLTAAAMTIGVSVCGFLAGTVIGTMITFMQLSRHMAIRWLADCYTTVL 69

Query: 137 RNIPPLVVIFFLY 149
           R +P L+VI+  Y
Sbjct: 70  RGVPDLLVIYLFY 82


>gi|116248726|ref|YP_764567.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253376|emb|CAK11764.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 219

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 69/123 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + A + AE+ R+G+  VPRGQ EAA A  L+ R+A   V+LPQA+  +IP L + 
Sbjct: 93  IGMGIHYATYTAEVYRAGIENVPRGQWEAAKATNLSTRQAWIHVILPQAIPPMIPALANY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ + K + L  A+   +L++   +I N   + IE + +    +L +S++  + +  L  
Sbjct: 153 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGIFFLVISLISVVGLRWLEE 212

Query: 391 KIA 393
           + A
Sbjct: 213 RYA 215


>gi|89899834|ref|YP_522305.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89344571|gb|ABD68774.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 227

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 30/211 (14%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R LS    T + +A   VF FVLG +     + + RH      + LP+L        G+ 
Sbjct: 16  RLLSGLKYTAELSAAGIVFGFVLGTL-----SAIVRH------QKLPVLN-------GIV 57

Query: 234 TLVLIALKYQLHFDKPVLGQ--FNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ + A++     + P L Q    F G ST+    S EF +  +AL+    A+  EI+R+
Sbjct: 58  SVYVEAIR-----NTPFLVQAFLVFFGLSTLGIRLSAEFCAA-LALTLNAGAYTCEIMRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL A  +GQ+EAA +LG+        V+L  A+  + P LTSQ++ L+ ++S+   +   
Sbjct: 112 GLDATHKGQIEAAESLGMGWPAIYWHVMLLPAIEKVYPALTSQFVLLMLSTSITSQISAE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L  V   + ++T ++ E+ L+   IYL+LS
Sbjct: 172 ELTGVANIVQSETFRSFEVYLLVGAIYLALS 202


>gi|326789991|ref|YP_004307812.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326540755|gb|ADZ82614.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 225

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 22/206 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S VLGIVL +  T  S+H   K  K +  +Y+    I  +P LV + + Y        
Sbjct: 34  ILSGVLGIVLGILMT--SKH---KAVKVICRIYLEAIRI--IPILVWLFIFY-------- 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G    IG   +  E +S+ I  + +  A + +IVR  + ++P+ Q ++  A+GL+  + 
Sbjct: 79  FGLTKLIG-YHIEAEIISI-IVFTLWGTAEMGDIVRGAITSMPKAQSDSGRAIGLSEIQI 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R +++PQA+R ++P   +    ++K +SL V +G  +++ VG  II  +   +    +W
Sbjct: 137 YRYIIIPQAIRRMLPTAINLATRMVKTTSLIVLIGVVEVLKVGQQIIEASILKVPSAPLW 196

Query: 371 MF-----IYLSLSIMIALFMNRLNAK 391
           ++     +Y  +   I++F  +L  K
Sbjct: 197 VYGFIFILYFIICYPISIFSKKLEMK 222



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 30/51 (58%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +A   MI + ++G ++G    S +K V  ICR+Y+E  R IP LV +F  Y
Sbjct: 28  VALIAMILSGVLGIVLGILMTSKHKAVKVICRIYLEAIRIIPILVWLFIFY 78


>gi|262047371|ref|ZP_06020328.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|260572345|gb|EEX28908.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
          Length = 223

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 27/180 (15%)

Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           LY+  F I  +PT+VL+ L Y      LH + P                +M++ +A S +
Sbjct: 60  LYLEFFRI--VPTVVLLYLVYYILPRSLHVNWPA--------------TWMAV-LAFSMW 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA  ++IVR  L +VP+ Q E+ +ALGL   +  R VLLPQA++  +P   +    ++K
Sbjct: 103 VAAEFSDIVRGALESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIK 162

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNAK 391
            +SL + +   ++++V   II    Q     + W++     +Y  L   ++ +  RL AK
Sbjct: 163 TTSLLMIINIMEVINVVQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 222



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/68 (26%), Positives = 38/68 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S    ++ G   + W+A   +I    +GT+ G  R   N+ + ++ R+Y+E FR +P 
Sbjct: 11  EGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPT 70

Query: 142 LVVIFFLY 149
           +V+++ +Y
Sbjct: 71  VVLLYLVY 78


>gi|312796581|ref|YP_004029503.1| cystine transport system permease protein [Burkholderia rhizoxinica
           HKI 454]
 gi|312168356|emb|CBW75359.1| Cystine transport system permease protein [Burkholderia rhizoxinica
           HKI 454]
          Length = 219

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 72/128 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+++E +R  ++ + RGQ  AA +LGL+ ++  R V+ PQA+R  +P L++ 
Sbjct: 92  LALSANVSAYLSESMRGAILGIARGQWLAAYSLGLSRQQTLRYVVGPQALRIAVPSLSNS 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     +I  T Q + + +    +Y  L  ++    +RL  
Sbjct: 152 LISLVKDTSLVSVITVTELLHSAQEVIAATYQPLPLYVGAASVYWVLCHLLEGLQHRLER 211

Query: 391 KIALKEKK 398
            +AL  + 
Sbjct: 212 YLALPTRH 219


>gi|222102299|ref|YP_002546889.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Agrobacterium radiobacter K84]
 gi|221728416|gb|ACM31425.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Agrobacterium radiobacter K84]
          Length = 237

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 70/130 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +AL+ +   F+AE  R+GL A+P GQ +A  ALG +   A R V++PQ +  +
Sbjct: 97  PPITTGILALAIHYGCFVAEAYRAGLEALPSGQRDAITALGFSRFAAYRHVIVPQLVPFL 156

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L +  +++ K + L  ++   D++ V         Q IE I +   I+L +S+  +L
Sbjct: 157 IPALGNLLVSIFKETPLLASIAVTDIMFVAMQYGADHFQYIEPITMCGLIFLVISLATSL 216

Query: 384 FMNRLNAKIA 393
            + RL A ++
Sbjct: 217 IVRRLEAMVS 226


>gi|186474261|ref|YP_001861603.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196593|gb|ACC74557.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 219

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 68/123 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+    A+++E +R  ++ + +GQ  AA +LGLTH +  R V+ PQA+R  +P L + 
Sbjct: 92  LALTANAGAYLSESMRGAILGISQGQWGAAHSLGLTHMQTLRYVICPQALRMAVPSLGNT 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +++     +I  T Q + + L    IY  LS  ++     +  
Sbjct: 152 LISLIKDTSLVSVITVTEMLRAAQEVIASTFQPLPLYLAAAAIYWLLSTGMSWVQRHVEV 211

Query: 391 KIA 393
           ++A
Sbjct: 212 RLA 214


>gi|37680520|ref|NP_935129.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           YJ016]
 gi|37199268|dbj|BAC95100.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           YJ016]
          Length = 227

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           LGI + L   R SR++      +LP   YI  F   G P LV      QL+     + QF
Sbjct: 34  LGIAIPLAVARNSRNYV----VSLPAWGYIYFFR--GTPLLV------QLYLIYYGMDQF 81

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +  +     +    +A    T+A+ AEI+R  +  +P+G++EAA A G++H    R +
Sbjct: 82  FPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKGEVEAAKAYGMSHWMTYRRI 141

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LP A+R  +P  +++ + +L  S++A  V   DL      + ++     E  L     Y
Sbjct: 142 VLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGAARLVNSRYYAPFESFLTAGLFY 201

Query: 375 LSLSIMI 381
           +SL+ +I
Sbjct: 202 MSLTFLI 208


>gi|320155823|ref|YP_004188202.1| histidine ABC transporterpermease HisM [Vibrio vulnificus MO6-24/O]
 gi|319931135|gb|ADV85999.1| histidine ABC transporter, permease protein HisM [Vibrio vulnificus
           MO6-24/O]
          Length = 225

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 13/187 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           LGI + L   R SR++      +LP   YI  F   G P LV      QL+     + QF
Sbjct: 32  LGIAIPLAVARNSRNYV----VSLPAWGYIYFFR--GTPLLV------QLYLIYYGMDQF 79

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +  +     +    +A    T+A+ AEI+R  +  +P+G++EAA A G++H    R +
Sbjct: 80  FPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKGEVEAAKAYGMSHWMTYRRI 139

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LP A+R  +P  +++ + +L  S++A  V   DL      + ++     E  L     Y
Sbjct: 140 VLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGAARLVNSRYYAPFESFLTAGLFY 199

Query: 375 LSLSIMI 381
           +SL+ +I
Sbjct: 200 MSLTFLI 206


>gi|153853349|ref|ZP_01994758.1| hypothetical protein DORLON_00747 [Dorea longicatena DSM 13814]
 gi|149754135|gb|EDM64066.1| hypothetical protein DORLON_00747 [Dorea longicatena DSM 13814]
          Length = 216

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ A+P GQ EAA  LG +  +    ++ PQ  + I+P +T++ + L+K+
Sbjct: 99  AAYFAEIYRGGIEAIPVGQYEAAKVLGYSKGQTFFRIVFPQVCKHILPAVTNEIITLVKD 158

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +   ++ ++   I       +  I   +F Y+  ++++A+ M ++  K+
Sbjct: 159 TSLAFVLAVTEMFTMAKQIAAAQTSMVPYIAAGIFYYV-FNLLVAMIMEKIEEKL 212


>gi|121607717|ref|YP_995524.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552357|gb|ABM56506.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 241

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 18/197 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             V+G  L+L   RLSRH   +   A    YI  F   G P LV + + Y      P LG
Sbjct: 37  GLVVGCALAL--ARLSRH---RWLAAPAHFYIWVFR--GTPLLVQLIIIYT---GLPQLG 86

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               +  S V    + L +      AA++AE+VR G+ +V  GQ  AA A+G +  ++ R
Sbjct: 87  ----VKLSVVESALLGLILN----EAAYLAEVVRGGIQSVSVGQTNAARAVGFSSAQSMR 138

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +++PQAMR IIP L +    LLK +S+   +   +L+     +I +    +E+ ++   
Sbjct: 139 YIVMPQAMRLIIPTLGNSINGLLKTTSITSVISMEELLRRTQVLIQEKFMVLELFIVAAI 198

Query: 373 IYLSLSIMIALFMNRLN 389
            YL ++ +      R+ 
Sbjct: 199 YYLLMTTVWDFIQRRIE 215



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T WL  + +    ++G  +   RLS ++ +A     Y+ VFR  P LV +  +
Sbjct: 19  ILSGALTTLWLTLAAIAGGLVVGCALALARLSRHRWLAAPAHFYIWVFRGTPLLVQLIII 78

Query: 149 Y 149
           Y
Sbjct: 79  Y 79


>gi|330444606|ref|YP_004377592.1| amino acid ABC transporter permease [Chlamydophila pecorum E58]
 gi|328807716|gb|AEB41889.1| amino acid ABC transporter, permease protein [Chlamydophila pecorum
           E58]
          Length = 204

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 66/112 (58%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+  +AL+  +AA++AE +R G+ A+  GQ E+A  LG    +    +L PQ  R+++P 
Sbjct: 78  MAGIMALTINSAAYLAENIRGGINAISVGQWESAKVLGYRPYQTFLYILYPQVFRNVLPS 137

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           L ++++ L+K SS+ + VG  +L  V   I+++    +E+  I   +YL ++
Sbjct: 138 LMNEFIALIKESSILMVVGIPELTKVSKDIVSRELNPMEMYSICAALYLMMT 189


>gi|307296170|ref|ZP_07576000.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306496144|gb|EFM65724.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
          Length = 214

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 49/76 (64%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI   G+ A+P+GQ EAA  L LT  +    ++LPQ ++ ++P + ++ +NL+K+
Sbjct: 97  AAYFAEIFHGGIQAIPQGQYEAAKVLRLTRFQTVTRIILPQVVKIVLPSVGNEIINLVKD 156

Query: 338 SSLAVAVGFADLVSVG 353
           +SL   +G  DL+  G
Sbjct: 157 TSLIYVLGLGDLLRAG 172


>gi|300718268|ref|YP_003743071.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia
           billingiae Eb661]
 gi|299064104|emb|CAX61224.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia
           billingiae Eb661]
          Length = 268

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 1/103 (0%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T SP F ++ + LS  TAA  AE++R  + +V  GQ E+A ++G ++ +  RLV+LPQA 
Sbjct: 131 TFSPLFKAI-VGLSLPTAANFAEVIRGAVQSVHSGQWESARSMGYSYWQIYRLVILPQAF 189

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           R IIP   + Y  L  +++LA   G  ++V++  T +   G++
Sbjct: 190 RRIIPGWMNLYALLTISTALATVTGVQEVVTLLRTTLATEGES 232


>gi|126730634|ref|ZP_01746444.1| ABC transporter, membrane spanning protein [Sagittula stellata
           E-37]
 gi|126708800|gb|EBA07856.1| ABC transporter, membrane spanning protein [Sagittula stellata
           E-37]
          Length = 216

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F++EI R  + AVPRGQ EA+ +L +++ +  R V+LPQA    I P     ++++K ++
Sbjct: 100 FLSEIWRGCVAAVPRGQWEASSSLAMSYVEQMRYVVLPQAFSLAIGPTVGFLVDIMKATA 159

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +G+ +L   G  I N T Q  ++      IY  L   +++   R+  K ++  
Sbjct: 160 VTAIIGYVELFQAGNAIANTTFQPFKVYGFVAIIYFLLCWPVSIAARRIEEKYSVSH 216


>gi|322513522|ref|ZP_08066623.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
 gi|322120675|gb|EFX92566.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
          Length = 222

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 68/127 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   AA+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFAAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLKIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + + RL  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIARLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|225163802|ref|ZP_03726100.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Opitutaceae bacterium TAV2]
 gi|224801595|gb|EEG19893.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Opitutaceae bacterium TAV2]
          Length = 229

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 16/205 (7%)

Query: 193 SFVLGIVLSLFA--TRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKP 249
           S +LG+ L +    TRLS H   +    LP   Y+   ++ G P LV I + Y   F  P
Sbjct: 28  SVILGVTLGVGVALTRLSSHAWLR----LPATAYVE--VLRGTPMLVQIFIMYFAFF--P 79

Query: 250 VLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +L +    + G   +    +  +AL   ++A++ EI R G+ +V  GQ EA  +LG+T  
Sbjct: 80  MLAEHVPGLEGLARANAIYAGMLALGVNSSAYLGEIFRGGIQSVDIGQYEAGRSLGMTPY 139

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAI 364
           +  R ++LPQA+ + +P + ++++ L+K+SSL  A+  ADL       GG         +
Sbjct: 140 RIMRHIVLPQALVNALPAVGNEFVTLIKDSSLVSAIAVADLTYRAQQAGGRSYEFFSMYL 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
            I +I+  +  + S  +A+F  +L 
Sbjct: 200 AIAIIYFCLTFAASRGLAVFEKKLR 224


>gi|168576494|ref|ZP_02722368.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|307067223|ref|YP_003876189.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|183577685|gb|EDT98213.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|306408760|gb|ADM84187.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
          Length = 219

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A + EI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALVEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|49475803|ref|YP_033844.1| amino acid permease [Bartonella henselae str. Houston-1]
 gi|49238610|emb|CAF27851.1| Amino acid permease [Bartonella henselae str. Houston-1]
          Length = 238

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           FI G+++     S  I  + +  A+ AEI+R+G+ +V +GQ  A  ALG+T+ +   +V+
Sbjct: 99  FITGTSIGAN-KSALITFTAFETAYFAEIIRAGINSVSQGQKHAGQALGMTYWQNMYIVI 157

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA R ++P   +Q + L ++++L  A+    L++    + N  G   E  ++    Y 
Sbjct: 158 LPQAFRDMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIVANNFGVKQEAYILAAIFYF 217

Query: 376 SLSIMIALFMNRLNAKIAL 394
            +   ++  +  L  KI++
Sbjct: 218 VICFTLSQIVLYLQKKISI 236


>gi|37525533|ref|NP_928877.1| arginine transporter permease subunit ArtQ [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784961|emb|CAE13879.1| Arginine transport system permease protein artQ [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 238

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   +A+ ++ +R  + A+P GQ EA  ALGL   +    +++PQ  R
Sbjct: 101 VSP-FLCGVIALSLLYSAYASQTLRGAIKAIPIGQWEAGQALGLGRAEIFFRLIMPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     +I   IYL+++++ 
Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMQQTKSIATRTQEPFTWYMIVALIYLAITLIS 219

Query: 382 ALFMNRLN 389
              + ++ 
Sbjct: 220 QFILKKIE 227


>gi|299530122|ref|ZP_07043548.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44]
 gi|298721779|gb|EFI62710.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44]
          Length = 220

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 36/217 (16%)

Query: 188 KIFVFSFVLGIVLS----------LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           K+ V SFV G++L           L   RL+   + +  + +P + +  F++F LP L +
Sbjct: 24  KLTVVSFVPGVMLGTVVAVLRLMPLPPLRLALTVYVEIFRNIPSVALLIFIVFALPDLNI 83

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           + + Y+                        S+ + L+   +AF A+ +RSG+  +P  Q+
Sbjct: 84  V-IDYE-----------------------PSVILTLTLVCSAFTADYLRSGINTIPGSQI 119

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA--DLVSVGGT 355
           EAA++LG+   +    V+LPQA+RS++ P+TS  + L+ ++SLA  + F   +L ++   
Sbjct: 120 EAALSLGMRPLQIVSAVVLPQALRSVVQPMTSLLIALMLSTSLASQLPFPGRELTALVSK 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I N +   I    +   +Y+   ++IA     L  K+
Sbjct: 180 IANDSALGIAAFAVAATMYVVTGLLIAWAGAALEKKV 216



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y  A     + T+ L     +P  ++GT+V   RL     +     VYVE+FRNIP +
Sbjct: 9   ADYGPAFWQALLLTWKLTVVSFVPGVMLGTVVAVLRLMPLPPLRLALTVYVEIFRNIPSV 68

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPF 167
            ++ F+      V  +PD +IV+ +
Sbjct: 69  ALLIFI------VFALPDLNIVIDY 87


>gi|33596085|ref|NP_883728.1| putative amino-acid ABC transporter, permease protein [Bordetella
           parapertussis 12822]
 gi|33573088|emb|CAE36730.1| putative amino-acid ABC transporter, permease protein [Bordetella
           parapertussis]
          Length = 226

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 66/132 (50%), Gaps = 4/132 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  +    A+ +E++R  + ++PRGQ EAA +L +T  +A R  +LPQA R  +PPL + 
Sbjct: 94  IGFTLNVGAYNSEVIRGAIESIPRGQWEAAYSLSMTRGQAMRRTVLPQAARVAVPPLANS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI----EIILIWMFIYLSLSIMIALFMN 386
           ++ L+K++SLA  +   ++      I   T + +    E  LI++    +LS +      
Sbjct: 154 FIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSALSSLQVHLEK 213

Query: 387 RLNAKIALKEKK 398
           R        E+ 
Sbjct: 214 RFGQHAVFAEQH 225


>gi|298294041|ref|YP_003695980.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930552|gb|ADH91361.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 226

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   +AF++E+ RSG+ +VPR Q EAA +LGL+       V+ PQA R ++P L + 
Sbjct: 94  IGLTINYSAFMSEVYRSGIQSVPRSQYEAAQSLGLSPTITFVKVIFPQAFRVVLPALGNY 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + L K+++LA  V   +L+  G  I  +  Q   +  +   +Y ++    AL + RL 
Sbjct: 154 LIALFKDTALASVVTVQELMFSGQIIAARNYQYFTVYTVTAILYFAVGYPSALLVRRLE 212


>gi|110803729|ref|YP_698645.1| glutamine ABC transporter permease [Clostridium perfringens SM101]
 gi|110684230|gb|ABG87600.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens SM101]
          Length = 213

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA +   AA+  EI RSG+  + +GQ EA+  LGL+     + ++LPQ+ +  +
Sbjct: 83  RFPAAIIAFTLNYAAYFGEIFRSGIKDIDKGQFEASKILGLSKWFTFKKIILPQSFKKTL 142

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           P +T++ + L+K++SL   VG  +L+  G    N+   
Sbjct: 143 PSITNEVITLVKDTSLVYVVGIGELLRAGKIASNRDAS 180


>gi|315282710|ref|ZP_07871057.1| amino acid ABC transporter, permease protein [Listeria marthii FSL
           S4-120]
 gi|313613646|gb|EFR87443.1| amino acid ABC transporter, permease protein [Listeria marthii FSL
           S4-120]
          Length = 108

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 64/104 (61%), Gaps = 1/104 (0%)

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  
Sbjct: 1   GFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIG 60

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+  G   +++    I ++L+   IYL+L+ ++ +   +L  +
Sbjct: 61  DLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKR 103


>gi|297160231|gb|ADI09943.1| amino acid ABC transporter transmembrane protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 216

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 50/81 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL  + + + AE+ R+G+  VP+GQ EA  AL L+  +    V+LPQA+R ++P L + 
Sbjct: 93  IALGLHYSTYTAEVYRAGIDGVPKGQWEACTALSLSRGRTWIAVILPQAIRRVVPALGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + +LK+S +   +G  D++ 
Sbjct: 153 VIAMLKDSPMLALIGVVDMLQ 173


>gi|222106141|ref|YP_002546932.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221737320|gb|ACM38216.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 229

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 65/119 (54%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A G+      R V LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGMGRFTLIRRVWLPRAIRIALPTIAGEVVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +++    YL+++ +IA     + A++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVAYKVRQDTLLVYEPLIVVTLFYLAITAIIARCFRMVEAQVPIRR 229


>gi|146319535|ref|YP_001199247.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           05ZYH33]
 gi|145690341|gb|ABP90847.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           05ZYH33]
          Length = 297

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 39/53 (73%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P
Sbjct: 242 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILP 294


>gi|295094949|emb|CBK84040.1| ABC-type amino acid transport system, permease component
           [Coprococcus sp. ART55/1]
          Length = 137

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 73/122 (59%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+R G+++V  GQME   A+GL+       +++PQA+++I+P L +++++L+K
Sbjct: 15  SGAYISEIMRGGILSVDPGQMEGGRAMGLSFSTTMLKIVIPQAVKNILPTLGNEFISLIK 74

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG  DL      I + + + +   L+   IY+ + ++I+L +  +   +   +
Sbjct: 75  ETSVVSFVGATDLYVAFNYIGSNSYEFMVPYLVMALIYIVMVLLISLGIKLMERSLRKSD 134

Query: 397 KK 398
           ++
Sbjct: 135 RR 136


>gi|289450156|ref|YP_003475673.1| ABC transporter ATP-binding protein [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184703|gb|ADC91128.1| ABC transporter, ATP-binding protein [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 580

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 1/131 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +++I +S  T A++AE VR G++++  GQ E A ALGL H +  R ++LPQA+R+I+P
Sbjct: 111 FAAIFI-VSINTGAYMAETVRGGVMSIDPGQTEGAKALGLNHYRTMRSIILPQAIRNIMP 169

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +  +  +K++ +   +G  +L     +I   T        + M IY +++   +  +
Sbjct: 170 QIGNNLIINIKDTCVLSIIGVMELFYTMKSISGATYAFFPTFTVAMVIYFAITFTCSRLL 229

Query: 386 NRLNAKIALKE 396
             L  ++A +E
Sbjct: 230 LCLEHRLAGEE 240


>gi|288935411|ref|YP_003439470.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288890120|gb|ADC58438.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 218

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 56/96 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AF+ +I    + A+P+GQ EA+  LGL+  +    V+ PQA+R  I P    
Sbjct: 91  VALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 151 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKV 186


>gi|323466465|gb|ADX70152.1| Amino acid ABC transporter, permease protein [Lactobacillus
           helveticus H10]
          Length = 230

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F I  +PT+VL+   Y +++  P     N+       P      +A S + AA  
Sbjct: 66  IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 113

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++IVR  + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL 
Sbjct: 114 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 173

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           + +   ++++VG  II    Q     + W++
Sbjct: 174 LVISIMEVINVGQQIIEANNQQYPTGVFWVY 204



 Score = 42.7 bits (99), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 39/68 (57%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S    ++ G   + W+A   +I    IGT+ G  R   NK++ ++ R+Y+E FR +P 
Sbjct: 17  EGSNFARLMAGLWTSIWIAAISLIIGLAIGTIFGILRTLPNKIIRFVLRIYLEFFRIVPT 76

Query: 142 LVVIFFLY 149
           +V+++ +Y
Sbjct: 77  IVLLYLVY 84


>gi|291561989|emb|CBL40800.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SS3/4]
          Length = 236

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 74/122 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+I+EI+RSG+ +V  GQ+EA  A+GL    A   +++PQA+++I+P L ++++ L+K
Sbjct: 114 SGAYISEIMRSGIQSVDPGQLEAGRAVGLGFGPAMIRIVIPQAVKNILPTLGNEFIALIK 173

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   VG ADL      I + + + +   L+   IY+ L ++I++ +  +   +   +
Sbjct: 174 ETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMAAIYIVLVLVISILVKLMERSLKKSD 233

Query: 397 KK 398
           ++
Sbjct: 234 RR 235


>gi|283796771|ref|ZP_06345924.1| amino acid ABC transporter, permease protein [Clostridium sp.
           M62/1]
 gi|291075659|gb|EFE13023.1| amino acid ABC transporter, permease protein [Clostridium sp.
           M62/1]
 gi|295092614|emb|CBK78721.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
 gi|295115213|emb|CBL36060.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SM4/1]
          Length = 216

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++P GQ EAA  LG +  +    ++ PQ ++ I+P +T++ + L+K+
Sbjct: 99  AAYFAEIYRSGIQSMPAGQYEAAKMLGYSRTQTFFRIIFPQVIKRILPSITNEVITLVKD 158

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +   ++ +V   + +     I  +   +F Y+  ++++A+ M     ++
Sbjct: 159 TSLAFTISVMEMFTVAKALASSQVSMIPFVAAGLFYYV-FNLLVAVVMEHAEKRL 212


>gi|78186725|ref|YP_374768.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78186899|ref|YP_374942.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78166627|gb|ABB23725.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Chlorobium luteolum DSM 273]
 gi|78166801|gb|ABB23899.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Chlorobium luteolum DSM 273]
          Length = 508

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 12/171 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G P LVL+ L + + F               + P  +++ IA     AA+ AEI R+
Sbjct: 345 LLRGTPVLVLLMLVFYVVF-----------ASVNIDPVLVAV-IAFGLNFAAYSAEIFRA 392

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  + RGQ EA IA+G T       ++LPQ ++ I+P    ++++L+K +S+   +   
Sbjct: 393 GIEGIDRGQTEAGIAMGFTGPATFYFIVLPQTLQRILPVYKGEFISLVKMTSIVGYIAVQ 452

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           DL   G  I ++T  A   +++   +Y  LS  +   +  L   +A K + 
Sbjct: 453 DLTKAGDIIRSRTFDAFFPLIMVAALYFFLSWALMRMLEYLEGMMAPKHRN 503


>gi|87302594|ref|ZP_01085411.1| permease protein of amino acid ABC transporter [Synechococcus sp.
           WH 5701]
 gi|87282938|gb|EAQ74895.1| permease protein of amino acid ABC transporter [Synechococcus sp.
           WH 5701]
          Length = 427

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 33/187 (17%)

Query: 167 FGMFLNNRGLSFPT----------LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
            GM L   GL  P           LT+   +   + SF +G+V++L      R       
Sbjct: 197 LGMVLIAGGLGIPRVPPSEWGGLLLTLLMASFAILLSFPIGVVVAL-----GRR------ 245

Query: 217 KALPLL-YISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +LPLL + S F    I G P + L      L   + +LG +   GG      + + ++ 
Sbjct: 246 SSLPLLRWTSVFYIEFIRGAPLITL------LFLGQNILG-YMLPGGWAPDRVWRAAWV- 297

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ +  A++AE VR+GL AVP GQ+EAA +LGL+   A + V+LPQA+R  +P    Q++
Sbjct: 298 LTFFCGAYLAEAVRAGLSAVPPGQLEAARSLGLSMPLALQRVVLPQALRIALPAAVGQFI 357

Query: 333 NLLKNSS 339
           +LL++++
Sbjct: 358 SLLQDTT 364


>gi|57504977|ref|ZP_00370929.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|305432023|ref|ZP_07401190.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|57019249|gb|EAL55955.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|304445107|gb|EFM37753.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 219

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S YT++ +AEI+R GL ++P+GQ EAA + G +       ++LPQ  R ++P L SQ
Sbjct: 91  IGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFSKFFTLFYIILPQTFRKVVPSLLSQ 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII-------LIWMFIYLSLSIMIAL 383
            +  +K+++    +  A+L      I+ +     EI+       +I+  I  SLS+++  
Sbjct: 151 IVTTVKDTAYLAGLQIAELTYNSKNILARLTSFDEILATIGFVAVIYFAICFSLSMLVRY 210

Query: 384 FMNR 387
           +  +
Sbjct: 211 YAKK 214


>gi|152970316|ref|YP_001335425.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238894800|ref|YP_002919534.1| putative amino acid ABC transport system permease component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|150955165|gb|ABR77195.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238547116|dbj|BAH63467.1| putative amino acid ABC transport system permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 218

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 56/96 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AF+ +I    + A+P+GQ EA+  LGL+  +    V+ PQA+R  I P    
Sbjct: 91  VALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 151 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKV 186


>gi|148998280|ref|ZP_01825749.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147755923|gb|EDK62967.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
          Length = 180

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A + EI+R GL AV +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALVEIIRGGLNAVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|149377566|ref|ZP_01895306.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
 gi|149358179|gb|EDM46661.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
          Length = 224

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 56/81 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A++AE +R+ ++ V R Q EAA+++G+T+ +  R ++LPQA R  +P L + 
Sbjct: 97  MGLTMHFSAYMAESIRAAIVGVDRSQTEAALSIGMTNGQLMRRIVLPQATRVALPTLMNY 156

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +++++K +SLA  +G  +L+ 
Sbjct: 157 FIDMIKATSLAFTLGVTELMG 177


>gi|83950195|ref|ZP_00958928.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83838094|gb|EAP77390.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 246

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 17/244 (6%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y S+L  L  PD    L       NRG     L M   AK+ V S    +++      + 
Sbjct: 3   YSSILDWL-WPDWFFNLAVVSDEYNRGRYLAGLWM--TAKLAVVSIFFSLIIGAIGAAV- 58

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE--- 265
           +    KT + L   +++ F     P LV      QL+F    +G    I G    P+   
Sbjct: 59  QGAQSKTLRVLVGFFVAFFR--NTPPLV------QLYFFYFAIGTVLRITGDNGLPQPLI 110

Query: 266 --FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F    I+LS +  A   EI R+G+ AVP+  +EAA ALG T  +    ++LP A+R  
Sbjct: 111 GNFGWAIISLSLFAGALNVEIFRAGIEAVPKSTVEAAEALGYTRLQIYTDIVLPLAVRIS 170

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  +NL+K ++LA A+   +L+ V   I ++     E++ + +  Y+ L  ++  
Sbjct: 171 LPALGTNLVNLVKTTTLAYAIAVPELLYVSAQIWSEDLNVREMMNVLLISYVGLVAILVW 230

Query: 384 FMNR 387
            ++R
Sbjct: 231 VLHR 234


>gi|206580810|ref|YP_002238437.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|290509461|ref|ZP_06548832.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
 gi|206569868|gb|ACI11644.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|289778855|gb|EFD86852.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
          Length = 218

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 56/96 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AF+ +I    + A+P+GQ EA+  LGL+  +    V+ PQA+R  I P    
Sbjct: 91  VALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 151 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKV 186


>gi|167841278|ref|ZP_02467962.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           thailandensis MSMB43]
          Length = 223

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++   A+S  +AA++AEI+R G ++VP G +EAA  LG+        + +PQA R  
Sbjct: 93  PPLVAAVSAVSLCSAAYVAEILRGGFLSVPYGHIEAARMLGMRAFATLWRIKVPQATRLT 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++ + L+K SSL   VG A++      I   T + +E  L    IY  ++  +A 
Sbjct: 153 LPSLANEMVLLIKASSLISVVGVAEVTRTAQNIAASTYRPLEAYLAAGLIYFVINGTLAA 212

Query: 384 FM----NRLNA 390
           F     +RL+A
Sbjct: 213 FAHLAEHRLHA 223


>gi|292670512|ref|ZP_06603938.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Selenomonas noxia ATCC 43541]
 gi|292647922|gb|EFF65894.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Selenomonas noxia ATCC 43541]
          Length = 235

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 1/124 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             V P + +++I  +  T A + E  RS L+A+P+GQ+EA +A GL+  +    V++PQA
Sbjct: 97  EAVDPFWYAVFI-FTINTIALLTEAFRSALLAIPKGQLEAGLAGGLSELQTYLHVIIPQA 155

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +   +P + +  +NL+K +SLA  +   D+ +VG    +     IE  L    +YL L  
Sbjct: 156 LVVALPSIANITVNLIKGTSLAFLMTVKDITAVGKVAASYGYNYIEAYLDVFLVYLVLCT 215

Query: 380 MIAL 383
           ++ L
Sbjct: 216 VVQL 219


>gi|195973408|gb|ACG63351.1| allantoate transport membrane protein [Klebsiella oxytoca M5al]
          Length = 218

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AF+ +I    + A+P+GQ EA+  LGL+  +    V+ PQA+R  I P    
Sbjct: 91  LALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K ++LA  +GF +L   G  + N T Q  ++  +    Y  L   +A +   L  
Sbjct: 151 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKVFALVALGYFILCYPLARYSRYLEN 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|182440605|ref|YP_001828324.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326781279|ref|ZP_08240544.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178469121|dbj|BAG23641.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326661612|gb|EGE46458.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 292

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 22/182 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPL+     ++FG+P     AL+ +     PVL     +GG            AL   
Sbjct: 129 RGLPLIICLLIVVFGVP-----ALRLEGVTTDPVL-----LGGG-----------ALVLT 167

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+ R+G+ +V   Q  AA +LGL+  +A R V+LPQA+R ++PPL +  ++L K
Sbjct: 168 YSAYVAEVFRAGIESVHPSQRAAARSLGLSGGQALRFVVLPQAVRRVVPPLLNDLVSLQK 227

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++ L    G  D V     I ++       ++  + ++++L+I +    + + A++  + 
Sbjct: 228 DTGLVSIAGAVDAVYAAQIIASKDFNYTPYVVAGL-VFVALTIPMTRLTDWVTARMDRRR 286

Query: 397 KK 398
            +
Sbjct: 287 AQ 288


>gi|238749809|ref|ZP_04611314.1| Arginine transport system permease protein artQ [Yersinia rohdei
           ATCC 43380]
 gi|238712464|gb|EEQ04677.1| Arginine transport system permease protein artQ [Yersinia rohdei
           ATCC 43380]
          Length = 238

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFA----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V +  LG+VL+ LFA    +RL    +  TG     + LP + +  F+ FG   L+++  
Sbjct: 19  VCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78

Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L+ F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPVGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYMIAAAIYLVVTLL 218


>gi|213691640|ref|YP_002322226.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523101|gb|ACJ51848.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457727|dbj|BAJ68348.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 219

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 25/188 (13%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A ++ R + E + +  PLL    FL FGLP L ++        +   +    F+GGS   
Sbjct: 51  ARQIVRIYIELS-RNTPLLVQLYFLYFGLPKLGVV-----WSAETCAIVGLGFLGGS--- 101

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                           ++AE +R GL AVP  Q E A  LGLT  +    V+LPQA+ + 
Sbjct: 102 ----------------YMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTA 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP + +  + L K SS+  A+  AD++ +   +I       E + + +  YL + + I++
Sbjct: 146 IPGVVANVIFLFKESSVVSAIALADVMYMAKDLIGMYYSTYESLFMLIVAYLVILLPISI 205

Query: 384 FMNRLNAK 391
           F   L  +
Sbjct: 206 FGTWLERR 213


>gi|209695419|ref|YP_002263348.1| arginine/ornithine periplasmic binding protein-dependent
           transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
 gi|208009371|emb|CAQ79644.1| arginine/ornithine periplasmic binding protein-dependent
           transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
          Length = 246

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 30/231 (12%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           ++ + S +L + L +    L++    +  +++  +Y  T ++ G+P LVL+ L +   Q+
Sbjct: 20  QVALLSLILAVFLGMLGA-LAKLAPYRWARSIATVY--TTVVRGIPDLVLMMLLFFGGQM 76

Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287
             +  +     +I     S +       ++  YI +S + A          A++AE  R 
Sbjct: 77  LLNNGLYESNEWINEWMTSSDPNHEWVAYLPDYIEISPFIAGVLTIGFIFGAYMAETFRG 136

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++AV RG+MEAA A G++   A R +L PQ +R  +P   + +L LLK ++L   +G  
Sbjct: 137 AIMAVDRGEMEAAKAYGMSGPMAFRRILFPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           D+V V       T             Y++++ +  LF       + L E+K
Sbjct: 197 DMVRVSSMAAGTTKMPFT-------FYMTVACIFLLFTAVSTGALKLVERK 240


>gi|13475817|ref|NP_107387.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026576|dbj|BAB53173.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 233

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P L+ I L Y      L     + G   F+G     P F +  +A+   + A+  E+ 
Sbjct: 64  GVPDLLTIYLLYYGGSIALTQIGTLFGSDGFVG----LPTFATGVLAIGIISGAYQGEVY 119

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R    AV RGQ EA  ALGL+  ++ RLV++PQ MR  +P L + +  +LK+S+L   +G
Sbjct: 120 RGAYQAVDRGQFEACKALGLSRYQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIG 179

Query: 346 FADLV 350
             +L+
Sbjct: 180 LVELM 184



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/32 (46%), Positives = 22/32 (68%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           RLS+ ++ AW+  VY  VFR +P L+ I+ LY
Sbjct: 44  RLSSRRVPAWLAHVYGTVFRGVPDLLTIYLLY 75


>gi|331267077|ref|YP_004326707.1| ABC transporter, membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
 gi|326683749|emb|CBZ01367.1| ABC transporter, membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
          Length = 240

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 9/214 (4%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + + VL  + +LF   L + +  +  ++  L+Y++   I   P ++LI   Y L    
Sbjct: 23  IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLF--P 77

Query: 249 PVLGQF-NFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +L QF   IG      +   LY A   Y   T   ++EI+RS ++ V +GQ+EAA A+G
Sbjct: 78  SLLNQFLKSIGSDFDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAIG 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++     +   Q  
Sbjct: 138 LTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIARVEASYGYQYF 197

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E   +    Y+ +  +I    + L      KEK+
Sbjct: 198 ESYFVIFLQYILICGLIQWGFSVLEKGYVKKEKR 231


>gi|323698678|ref|ZP_08110590.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458610|gb|EGB14475.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 218

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 7/120 (5%)

Query: 247 DKPVLGQ----FNFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           D P+L Q    F  +G  G  +SP  ++  + L+ +T+A++AEI R  + ++  GQ EA 
Sbjct: 62  DTPLLMQLFLIFFGVGLLGFDISP-LITAALGLTLFTSAYLAEIWRGCVESIANGQWEAG 120

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +L L+  +  R V+LPQA+R  +PP     + ++K +++   +GF ++   G  I N T
Sbjct: 121 ESLALSRWQQLRFVILPQAVRIAVPPTVGFSVQVVKGTAVTSIIGFMEITKTGSMISNAT 180


>gi|260550582|ref|ZP_05824791.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           RUH2624]
 gi|299770573|ref|YP_003732599.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. DR1]
 gi|260406293|gb|EEW99776.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           RUH2624]
 gi|298700661|gb|ADI91226.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. DR1]
          Length = 221

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           KAL  LY+    I  +P LVL+ + Y           F F   +  + +F ++++ +  +
Sbjct: 52  KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 96

Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  
Sbjct: 97  VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALVYVIFPQSLKRVTPGAINLFTR 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           ++K SSLAV +G  +++ VG  II  +   +    +W+  FI++ L  +I   ++RL A 
Sbjct: 157 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 215

Query: 392 I 392
           +
Sbjct: 216 L 216



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  R 
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRI 64

Query: 139 IPPLVVIFFLY 149
           IP LV++F  Y
Sbjct: 65  IPILVLLFVFY 75


>gi|330900967|gb|EGH32386.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330980616|gb|EGH78719.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 231

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)

Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260
           KT    PL ++ ST+  L+ G+P L+ + L Y             FD P L    F  G 
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAG- 99

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  
Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L + ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210


>gi|225570417|ref|ZP_03779442.1| hypothetical protein CLOHYLEM_06517 [Clostridium hylemonae DSM
           15053]
 gi|225160788|gb|EEG73407.1| hypothetical protein CLOHYLEM_06517 [Clostridium hylemonae DSM
           15053]
          Length = 216

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 19/213 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           ++++  A   +FS  LG+++S    R+SR    K  + +  LYIS  ++ G P ++ + +
Sbjct: 16  VSIEIFAATLIFSLPLGLIVSF--GRMSRI---KPVQWITKLYIS--IMRGTPLMLQLMV 68

Query: 241 KYQLHFDKPVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            Y         G +   G   + +    ++ I  +   AA+ AEI R G+ ++  GQ EA
Sbjct: 69  VY--------YGPYYLFGMRISATYRMTAVLIGFAINYAAYFAEIYRGGIESISEGQYEA 120

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A  LG T  +    ++LPQ M+ I+P +T++ + L+K++SLA  V   ++ +    I   
Sbjct: 121 ARVLGYTRPQTFFRIILPQVMKRILPSVTNEVITLVKDTSLAFVVAVPEMFTTAKQIAAA 180

Query: 360 TGQAIEIILIWMFIY---LSLSIMIALFMNRLN 389
                  +   +F Y   L +++++    N+LN
Sbjct: 181 QTSMTAFVAAGIFYYVFNLVVAVVMEAIENKLN 213


>gi|222106504|ref|YP_002547295.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737683|gb|ACM38579.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 222

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 62/108 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+  EI+R G+ ++ +GQ+EA +ALGL   +  R ++L  A+R++ P LTSQ
Sbjct: 95  VALGLNGGAYAIEIIRGGVDSIGKGQVEAGLALGLHRAQILRHIILKPALRAVYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           ++ L   +S+  ++   +L SV   I   T ++ E+      +YL +S
Sbjct: 155 FVMLTLTTSVCTSIAAYELTSVAQKIEADTFRSFEVYFSITLLYLVIS 202


>gi|66048137|ref|YP_237978.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|302187472|ref|ZP_07264145.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|63258844|gb|AAY39940.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330939295|gb|EGH42690.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330970705|gb|EGH70771.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 231

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)

Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260
           KT    PL ++ ST+  L+ G+P L+ + L Y             FD P L    F  G 
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAG- 99

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  
Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L + ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210


>gi|224367458|ref|YP_002601621.1| GlnP1 [Desulfobacterium autotrophicum HRM2]
 gi|223690174|gb|ACN13457.1| GlnP1 [Desulfobacterium autotrophicum HRM2]
          Length = 221

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 21/205 (10%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           NRGL    L       + V S + G+V+ + A  + R F  KT   +   Y + F   G 
Sbjct: 17  NRGLGMSLL-------LIVPSALGGVVIGITAGAI-RAFGSKTSARIGDGYAALFR--GT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + L+F  P +G +        SP + ++   + C + A+ +E VR  L+++
Sbjct: 67  PLVVQL---FVLYFGLPNIGIY-------FSPYWAAVTGFILC-SGAYQSEYVRGALLSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q  AA ALG T  +    V++PQAMR  +P   ++ + L+K SSLA  V F +L   
Sbjct: 116 RKNQYLAAEALGFTRIQTLVWVIIPQAMRRALPGCGNEIVYLIKYSSLAYVVTFMELTGE 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSL 377
           G TI  +  +  E+ L+    YL L
Sbjct: 176 GKTIATEYFRFTEVFLVIGCYYLVL 200


>gi|209515705|ref|ZP_03264569.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503941|gb|EEA03933.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 219

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 62/104 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  ++ + +GQ  A+ +LGL+ R+  R V+ PQA+R  +P L++ 
Sbjct: 92  IALSANVAAYLSESMRGAILGIHQGQWLASYSLGLSRRQTLRYVIAPQALRIAVPSLSNS 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            ++L+K++SL   +   +L+     II  T Q + + L    +Y
Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVY 195


>gi|184157759|ref|YP_001846098.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|294842165|ref|ZP_06786848.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. 6014059]
 gi|183209353|gb|ACC56751.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|322508069|gb|ADX03523.1| ArtM protein [Acinetobacter baumannii 1656-2]
 gi|323517651|gb|ADX92032.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 221

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           KAL  LY+    I  +P LVL+ + Y           F F   +  + +F ++++ +  +
Sbjct: 52  KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCIVVF 96

Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  
Sbjct: 97  VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTR 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           ++K SSLAV +G  +++ VG  II  +   +    +W+  FI++ L  +I   ++RL A 
Sbjct: 157 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 215

Query: 392 I 392
           +
Sbjct: 216 L 216



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  R 
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRI 64

Query: 139 IPPLVVIFFLY 149
           IP LV++F  Y
Sbjct: 65  IPILVLLFVFY 75


>gi|317406070|gb|EFV86334.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 272

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 8/184 (4%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           N +I V +  LG  L L    LS         + PL  ++   +       ++ L Y   
Sbjct: 68  NVQISVLAMALGTALGLVVGALS------LSPSRPLRRLTRAYVLAFRNAPILVLVYFTT 121

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P   + N  G +   P+++ + I L    +A +AEI R  + ++P  Q EAA +L  
Sbjct: 122 YVFPF--ELNLGGWNLPFPDWIKVVIGLGLPASANVAEIFRGAIQSIPEAQWEAAQSLAF 179

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  R+++LPQ +R ++P   + Y ++  ++SLA  VG  DLV       N   ++  
Sbjct: 180 RRAQIFRMIVLPQCVRRMLPSWMNLYASITMSTSLASLVGVHDLVDTATVASNTVARSDF 239

Query: 366 IILI 369
            +L+
Sbjct: 240 TVLV 243


>gi|222106269|ref|YP_002547060.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737448|gb|ACM38344.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 260

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 9/120 (7%)

Query: 233 PTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P LVLI A  Y   F+  V G + +F       P+++   + L+   +A+IAEI R  ++
Sbjct: 100 PHLVLIFATTYIFPFEIIVFGNYLSF-------PDWVKAMVGLAIPASAYIAEITRGAIL 152

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P  Q EAA  LG +  +A R ++LPQ +R  +PP  +   ++   +SLA  VG  +L+
Sbjct: 153 SIPTAQWEAAQGLGFSRWQALRWIILPQCLRRSLPPWMNVLASITMGTSLASLVGVHELL 212



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 13/88 (14%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF     ++ S M   +++G L+G  ++   +LV +   VYV+VFRN P LV+IF     
Sbjct: 52  GFAMNIVISLSAMTLGSVLGILLGMLQMVPFRLVRYPAAVYVQVFRNAPHLVLIF----- 106

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
                     + + PF + +    LSFP
Sbjct: 107 --------ATTYIFPFEIIVFGNYLSFP 126


>gi|170701276|ref|ZP_02892242.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|172064906|ref|YP_001815618.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|170133799|gb|EDT02161.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171997148|gb|ACB68065.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 240

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261
           +LSRH   ++ + L  LY + F   G+P L++I   Y  +F    L    GQ+    G  
Sbjct: 47  KLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFI 98

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G+      R +L+PQ +R
Sbjct: 99  GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRAMVLRRILVPQVLR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +   LK+S+L    G A+L+       + T Q     +    +YL ++ + 
Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYFVFFVAGGALYLVMTGLS 218

Query: 382 ALFMNRLNAKIALKEKK 398
               NR  A +    ++
Sbjct: 219 NRVFNRAEAIVGRSFRR 235


>gi|116513423|ref|YP_812329.1| ABC-type amino acid transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|161507577|ref|YP_001577531.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|260101516|ref|ZP_05751753.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus helveticus DSM 20075]
 gi|116092738|gb|ABJ57891.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|160348566|gb|ABX27240.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|260084659|gb|EEW68779.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus helveticus DSM 20075]
 gi|325125053|gb|ADY84383.1| ABC transporter [Lactobacillus delbrueckii subsp. bulgaricus 2038]
 gi|328466383|gb|EGF37535.1| amino acid ABC transporter permease [Lactobacillus helveticus MTCC
           5463]
          Length = 224

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F I  +PT+VL+   Y +++  P     N+       P      +A S + AA  
Sbjct: 60  IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++IVR  + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL 
Sbjct: 108 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           + +   ++++VG  II    Q     + W++
Sbjct: 168 LVISIMEVINVGQQIIEANNQQYPTGVFWVY 198



 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +  GI      S++A  ++ G   + W+A   +I    IGT+ G  R   NK++ ++ R+
Sbjct: 2   VHSGINVLFEGSNFAR-LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFVLRI 60

Query: 132 YVEVFRNIPPLVVIFFLY 149
           Y+E FR +P +V+++ +Y
Sbjct: 61  YLEFFRIVPTIVLLYLVY 78


>gi|301793798|emb|CBW36189.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae INV104]
          Length = 219

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL  V +GQ EA ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNTVDKGQYEAGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|258545835|ref|ZP_05706069.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Cardiobacterium hominis ATCC 15826]
 gi|258518851|gb|EEV87710.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Cardiobacterium hominis ATCC 15826]
          Length = 238

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 47/75 (62%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R G +A+P+GQ+EAA A GL+ +     +  PQ +R  +P L + +L L+KN
Sbjct: 110 GAYMAESFRGGFLAIPKGQIEAARAYGLSRKSIFWRISWPQMLRYALPSLGNNWLVLMKN 169

Query: 338 SSLAVAVGFADLVSV 352
           ++L   +G  D+V +
Sbjct: 170 TALVSIIGLQDIVRI 184


>gi|104773437|ref|YP_618417.1| amino acid ABC transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|103422518|emb|CAI97092.1| Amino acid ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 230

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F I  +PT+VL+   Y +++  P     N+       P      +A S + AA  
Sbjct: 66  IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 113

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++IVR  + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL 
Sbjct: 114 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 173

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           + +   ++++VG  II    Q     + W++
Sbjct: 174 LVISIMEVINVGQQIIEANNQQYPTGVFWVY 204



 Score = 43.1 bits (100), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +  GI      S++A  ++ G   + W+A   +I    IGT+ G  R   NK++ ++ R+
Sbjct: 8   VHSGINVLFEGSNFAR-LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFVLRI 66

Query: 132 YVEVFRNIPPLVVIFFLY 149
           Y+E FR +P +V+++ +Y
Sbjct: 67  YLEFFRIVPTIVLLYLVY 84


>gi|308185788|ref|YP_003929919.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056298|gb|ADO08470.1| putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 219

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V+P + +  +AL+ YT+AF+ +I    + A+P+GQ EA+  LGLT  +    V+ PQ
Sbjct: 81  GIDVAP-WTAASLALTFYTSAFLVDIWYGSIRALPKGQWEASRCLGLTFGQTLWRVVAPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 140 AIRIGIAPTVGFAVQVIKGTALASIIGFIELTKAGTILNNVTYQPFKV 187


>gi|149907743|ref|ZP_01896490.1| arginine ABC transporter, permease protein [Moritella sp. PE36]
 gi|149809413|gb|EDM69342.1| arginine ABC transporter, permease protein [Moritella sp. PE36]
          Length = 221

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 16/214 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALK 241
           + T  +I  FS + G   S+ A  L+     K    L LL  +  L+F G P L+ I L 
Sbjct: 13  LSTTLEITFFSLLFG---SMIAVLLTLAMINKI-PGLNLLARAIILVFTGTPLLIQIFLV 68

Query: 242 YQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           Y      P   QF +I  S     +    +   IALS  TAA+ + + +  + +VPRG+ 
Sbjct: 69  Y----SGP--SQFEWIKDSFLWDYLRQAKICAIIALSFNTAAYSSLLFKGAIESVPRGEW 122

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           +A  ALG+ +R+ T  V++P A+R ++P  +++ + +LK +SLA ++   D++     I 
Sbjct: 123 DACNALGM-NRRQTLAVIVPHAIRRVLPSYSNEVILVLKGTSLASSITIMDVMGYANQIN 181

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            QT  A+        IYL ++ ++ L   +L  K
Sbjct: 182 GQTYDALMAFSAAGIIYLGMNGILILIFKQLEKK 215


>gi|21221279|ref|NP_627058.1| amino acid ABC transporter transmembrane protein [Streptomyces
           coelicolor A3(2)]
 gi|256787536|ref|ZP_05525967.1| amino acid ABC transporter transmembrane protein [Streptomyces
           lividans TK24]
 gi|289771431|ref|ZP_06530809.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           lividans TK24]
 gi|6689162|emb|CAB65559.1| probable amino acid ABC transporter protein, integral membrane
           component [Streptomyces coelicolor A3(2)]
 gi|289701630|gb|EFD69059.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           lividans TK24]
          Length = 233

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 62/122 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +EIVR  L AV   Q E  IAL  T  +  +L+LLPQA+  +IPP ++ 
Sbjct: 88  LALGLTYGAYGSEIVRGSLAAVDPAQKEGGIALSFTPWQRMKLILLPQAVPEMIPPFSNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL      +     ++ EI    + IY  ++ ++   M  L  
Sbjct: 148 LIELLKGTALVSIMGMGDLAFSANLVRLALQESAEIYTYVLLIYFVIAFLLTRVMRGLEK 207

Query: 391 KI 392
           K+
Sbjct: 208 KL 209


>gi|330505509|ref|YP_004382378.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328919795|gb|AEB60626.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 231

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 5/182 (2%)

Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSL 269
           KT    PL ++    + ++ G+P L+ + L Y    +    LG+   +G   +SP F + 
Sbjct: 41  KTSPYKPLQWLGGSYSTIVRGVPELLWVLLIYFSTVNVLRALGESLGVGSLELSP-FAAG 99

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL     A+  E+ R  ++A+P+G  EA  ALG++  +    +++PQ  R  +P L +
Sbjct: 100 VIALGLCFGAYATEVFRGAILAIPKGHREAGQALGMSKGRILWKLIMPQMWRIALPGLGN 159

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            ++ L+K+++L   VG  +++      +  T   +   L+   IYL L+I+  + ++ L 
Sbjct: 160 LFMILMKDTALVSVVGLTEIMRQAQIAVTATKNPMTFFLVAAIIYLGLTIIAMIGLHFLE 219

Query: 390 AK 391
            K
Sbjct: 220 KK 221


>gi|239503578|ref|ZP_04662888.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii AB900]
          Length = 221

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           KAL  LY+    I  +P LVL+ + Y           F F   +  + +F ++++ +  +
Sbjct: 52  KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 96

Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  
Sbjct: 97  VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALVYVIFPQSLKRVTPGAINLFTR 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           ++K SSLAV +G  +++ VG  II  +   +    +W+  FI++ L  +I   ++RL A 
Sbjct: 157 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 215

Query: 392 I 392
           +
Sbjct: 216 L 216



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  R 
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRI 64

Query: 139 IPPLVVIFFLY 149
           IP LV++F  Y
Sbjct: 65  IPILVLLFVFY 75


>gi|167561989|ref|ZP_02354905.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           oklahomensis EO147]
          Length = 229

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 15/163 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKP 249
           SF+LG+V +  A +LS++   +    +  LY  T LI G+P LVL+ L +   Q+  ++ 
Sbjct: 28  SFLLGLVGA--AAKLSKN---RLSSGIGTLY--TTLIRGVPDLVLMLLLFYSLQIWLNQL 80

Query: 250 V-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L  +N I    + P F +  + L     A+  E  R   ++VPRGQ+EA  A G+T+ 
Sbjct: 81  TDLMNWNQI---DIDP-FAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTNW 136

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +    ++ PQ MR  +P + + +  L+K+++L   +G AD+V 
Sbjct: 137 QVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179


>gi|160894717|ref|ZP_02075492.1| hypothetical protein CLOL250_02268 [Clostridium sp. L2-50]
 gi|156863651|gb|EDO57082.1| hypothetical protein CLOL250_02268 [Clostridium sp. L2-50]
          Length = 228

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 93/185 (50%), Gaps = 16/185 (8%)

Query: 217 KALPLLYISTFLIF---GLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           K  PL Y+  F+++   G P ++ + + Y    L F  P+ G     GG  V+   +S  
Sbjct: 47  KFKPLSYLMKFIVWIVRGTPLMIQMLIIYYFPGLVFHNPIWGGGE--GGRFVAAS-VSFI 103

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  +CY     +EI R G+  +P GQ EA + LG+T R+    V L Q ++ I+P ++++
Sbjct: 104 VNYACY----FSEIYRGGIQGIPVGQEEAGLVLGMTPRQIFFKVKLLQMIKKIVPAMSNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387
            + L+K++SLA  +   +++  G   +  +     AI  +    F YL  + ++ + + +
Sbjct: 160 IITLVKDTSLARIIALQEIIWAGQAFMKGSQGISGAIWPLFFCAFYYLIWNGVLTVLLGK 219

Query: 388 LNAKI 392
           L  K+
Sbjct: 220 LEKKL 224


>gi|238789650|ref|ZP_04633433.1| Arginine transport system permease protein artQ [Yersinia
           frederiksenii ATCC 33641]
 gi|238722203|gb|EEQ13860.1| Arginine transport system permease protein artQ [Yersinia
           frederiksenii ATCC 33641]
          Length = 238

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHF----HEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V + VLG+VL+ LFA   S  +    +  TG     + LP + +  F+ FG   L+++  
Sbjct: 19  VCALVLGLVLAMLFAVCESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78

Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L+ F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPVGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYVIAAAIYLLVTLL 218


>gi|57168604|ref|ZP_00367737.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           coli RM2228]
 gi|305433022|ref|ZP_07402178.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|57020109|gb|EAL56786.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           coli RM2228]
 gi|304443723|gb|EFM36380.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 233

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 11/159 (6%)

Query: 198 IVLSLFATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQ 253
           I++S F   +   F +   +  +  PLL    FL + LP       K+ +H ++ P L  
Sbjct: 39  ILMSYFKITIMEAFCKVYIEFSRNTPLLIQLFFLYYALP-------KFDIHLEQIPPLNL 91

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                   + P F    + LS    +++AE  R+G  A+ + Q EA ++LG T     R 
Sbjct: 92  ICLSVDEALRPAFACAIVGLSFLGGSYMAESFRAGFEAIKKQQFEAGLSLGFTKLNNLRY 151

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           V++PQA+   +P +++  + L+K +S+   +   DLV+V
Sbjct: 152 VIMPQALGVCLPGISANIVFLIKETSVVSIIALPDLVTV 190


>gi|332161760|ref|YP_004298337.1| amino acid transport system permease protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665990|gb|ADZ42634.1| amino acid transport system permease protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 231

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 10/143 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIG-GSTVSPEFMSLYIALSCYTAAFIA 282
           T L+ G+P LV++ L   L F   +L  G F  +G G      F+S  +A+     A+  
Sbjct: 53  TTLVRGIPELVIMLL---LFFGGEMLVNGFFGLLGLGPVRFNTFVSGVLAIGIVFGAYYT 109

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R     V RGQ+EAA+A G+  R+    ++LPQ +   IP + + +L L+K S+L  
Sbjct: 110 ETFRGAFQTVERGQLEAAVAYGMRPRQVFWRIMLPQMLSFAIPGINNNWLGLMKASALIS 169

Query: 343 AVGFADLVSVGGTIINQTGQAIE 365
            +G  D+V     +  Q G+A +
Sbjct: 170 ILGLEDMV----WLAEQAGRATQ 188


>gi|237665697|ref|ZP_04525685.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237658644|gb|EEP56196.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 225

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 55/90 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + AA + +IVR  L ++P+ Q+E+  ALGL + +  R +++PQA+R ++P   + 
Sbjct: 97  IVFTLWGAAEMGDIVRGALQSLPKHQIESGKALGLNNFQLYRYIMIPQAVRRMLPGTINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
              ++K +SL V +G  D+V +G  II  +
Sbjct: 157 ATRMVKTTSLVVLIGVIDVVKIGQQIIETS 186


>gi|167562881|ref|ZP_02355797.1| amino acid ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
 gi|167570068|ref|ZP_02362942.1| amino acid ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 219

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 69/127 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++ 
Sbjct: 92  IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     II  T Q + + L    +Y  L  ++         
Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQLLEWVQRWYER 211

Query: 391 KIALKEK 397
           ++AL  +
Sbjct: 212 RLALPSR 218


>gi|217423525|ref|ZP_03455026.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
 gi|217393383|gb|EEC33404.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
          Length = 240

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 69/128 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++ 
Sbjct: 113 IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 172

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     II  T Q + + L    +Y  L  ++         
Sbjct: 173 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYER 232

Query: 391 KIALKEKK 398
           ++AL  + 
Sbjct: 233 RLALPSRH 240


>gi|300716053|ref|YP_003740856.1| Arginine transport system permease protein [Erwinia billingiae
           Eb661]
 gi|299061889|emb|CAX59005.1| Arginine transport system permease protein [Erwinia billingiae
           Eb661]
          Length = 238

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 113/223 (50%), Gaps = 22/223 (9%)

Query: 191 VFSFVLGIVLSL-FATRLSRHFHE----KTG-----KALPLLYISTFLIFGLPTLVL-IA 239
           V + V+G++L++ FA   S  +       TG     + LP + +  F+ FG   L+L ++
Sbjct: 19  VSALVVGLILAMIFAAWESARWRPVAWLGTGLVTLFRGLPEILVVLFVYFGASQLLLTLS 78

Query: 240 LKYQLHFDKPVLGQFNF-----IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             + ++     LG F+F     I    VSP F+   IALS   A++ ++ +R  L AVP 
Sbjct: 79  DGFTVN-----LGLFSFPVQVNIQNFDVSP-FLCGVIALSILYASYASQTLRGALKAVPV 132

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+  ALG+        ++LPQ  R  +P L +Q+L LLK+++L   +   D++    
Sbjct: 133 GQWESGQALGMKTPAIFFRLILPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQTK 192

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +I  +T +     L+   IYL ++++    + R++A+    E+
Sbjct: 193 SIAARTQEPFTWYLMAAAIYLVITLLSQQVLKRIDARATRFEQ 235


>gi|148977575|ref|ZP_01814154.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145963226|gb|EDK28493.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 225

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 7/155 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  + G+     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKGTLWENAWFCALVAFILNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G++EAA A G++  K  R ++LP A+R  +P  +++ + +L  S++A  V   DL 
Sbjct: 116 GLPKGEVEAAKAYGMSTSKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
                + ++     E  L     Y++L+ I+IA+F
Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMALTFIIIAIF 210


>gi|53719481|ref|YP_108467.1| putative ABC transporter membrane protein [Burkholderia
           pseudomallei K96243]
 gi|53723465|ref|YP_102926.1| amino acid ABC transporter permease [Burkholderia mallei ATCC
           23344]
 gi|121598882|ref|YP_993060.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia mallei SAVP1]
 gi|126441429|ref|YP_001058844.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 668]
 gi|126449548|ref|YP_001080332.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia mallei NCTC 10247]
 gi|126452898|ref|YP_001066090.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 1106a]
 gi|167719754|ref|ZP_02402990.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei DM98]
 gi|167738749|ref|ZP_02411523.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 14]
 gi|167815973|ref|ZP_02447653.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 91]
 gi|167824346|ref|ZP_02455817.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
 gi|167845888|ref|ZP_02471396.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei B7210]
 gi|167894458|ref|ZP_02481860.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|167902859|ref|ZP_02490064.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167911102|ref|ZP_02498193.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 112]
 gi|167919122|ref|ZP_02506213.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
 gi|226196344|ref|ZP_03791926.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237812102|ref|YP_002896553.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242316328|ref|ZP_04815344.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254179932|ref|ZP_04886531.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254188663|ref|ZP_04895174.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254197266|ref|ZP_04903688.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|254260445|ref|ZP_04951499.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|52209895|emb|CAH35867.1| putative ABC transport system, membrane protein [Burkholderia
           pseudomallei K96243]
 gi|52426888|gb|AAU47481.1| amino acid ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|121227692|gb|ABM50210.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei SAVP1]
 gi|126220922|gb|ABN84428.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 668]
 gi|126226540|gb|ABN90080.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|126242418|gb|ABO05511.1| cystine ABC transporter, permease protein [Burkholderia mallei NCTC
           10247]
 gi|157936342|gb|EDO92012.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|169654007|gb|EDS86700.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|184210472|gb|EDU07515.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|225931561|gb|EEH27566.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237504828|gb|ACQ97146.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242139567|gb|EES25969.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254219134|gb|EET08518.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
          Length = 219

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 69/127 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++ 
Sbjct: 92  IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     II  T Q + + L    +Y  L  ++         
Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYER 211

Query: 391 KIALKEK 397
           ++AL  +
Sbjct: 212 RLALPSR 218


>gi|319942068|ref|ZP_08016387.1| hypothetical protein HMPREF9464_01606 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804452|gb|EFW01330.1| hypothetical protein HMPREF9464_01606 [Sutterella wadsworthensis
           3_1_45B]
          Length = 292

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 22/213 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V S +LGI+ +  A +LSR    +   +L +++I      G P ++ I L
Sbjct: 95  LTIGVSAAAMVLSLLLGILSA--AAKLSRVLLLRDLSSLYVVFIR-----GTPLIMQIYL 147

Query: 241 KYQLHFDKPVLGQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                        F ++ G+   V   F +  I LS +  A+I+EI+R   +++   Q+E
Sbjct: 148 -------------FFYLVGTAWGVDDRFWAGVIILSVFEGAYISEIIRGSYLSIDPAQIE 194

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +A A+G T  +  R V++PQ     +P L  Q+ +++K+SSL   +   +L      +  
Sbjct: 195 SAKAVGFTRLQQLRFVIVPQMAARTLPALAGQFASVIKDSSLLSMISVVELTQAMREVSA 254

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              + +E  L    +YL L++ +AL    L  +
Sbjct: 255 VNLKLVECYLFLGVLYLILTLPVALVSRLLEKR 287


>gi|134291671|ref|YP_001115440.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134134860|gb|ABO59185.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 228

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 59/101 (58%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +  +A++    A+  EIVR+G+ AVP G +EAA AL ++  +  R V+LPQA+  + 
Sbjct: 92  EYAAAILAMTLNLGAYSVEIVRAGVAAVPNGHVEAASALAMSRAQMLRHVVLPQALAKVF 151

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           P L+SQ +  +  S++   +  ADL    G I ++  +A E
Sbjct: 152 PALSSQIVITMLGSAVVSQISVADLTYAAGYIQSRNFRAFE 192


>gi|313106242|ref|ZP_07792491.1| putative amino acid ABC transporter permease [Pseudomonas
           aeruginosa 39016]
 gi|310878993|gb|EFQ37587.1| putative amino acid ABC transporter permease [Pseudomonas
           aeruginosa 39016]
          Length = 214

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y AA+  E+VR G+ +VP     AA +LGL++R+    ++LP A R   P   + 
Sbjct: 91  LVLGVYAAAYCTEVVRGGVFSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L+++K++SL + +G  +L+    TI+ +  + + ++ I   +Y  +S ++A    RL A
Sbjct: 151 TLSVMKDTSLVLWIGIVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVA----RLGA 206

Query: 391 KIALKEKK 398
           ++  + ++
Sbjct: 207 RLERRWQQ 214


>gi|262044438|ref|ZP_06017499.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|330010549|ref|ZP_08306782.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|259038218|gb|EEW39428.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|328534486|gb|EGF61074.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 225

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 56/96 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ YT+AF+ +I    + A+P+GQ EA+  LGL+  +    V+ PQA+R  I P    
Sbjct: 98  VALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGF 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 158 AVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKV 193


>gi|239982049|ref|ZP_04704573.1| amino acid ABC transporter transmembrane protein [Streptomyces
           albus J1074]
 gi|291453901|ref|ZP_06593291.1| amino acid ABC transporter integral membrane protein [Streptomyces
           albus J1074]
 gi|291356850|gb|EFE83752.1| amino acid ABC transporter integral membrane protein [Streptomyces
           albus J1074]
          Length = 216

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 52/81 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+  + + + A++ R+G+ AVP GQ EAA AL L  R+    V+LPQA+R ++P L + 
Sbjct: 93  IAIGLHYSTYTAQVYRAGIDAVPVGQWEAATALSLPARRTWTAVILPQAIRRVVPALGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            +++LK++ L   +G  +++ 
Sbjct: 153 VVSMLKDTPLLAGIGVLEMLQ 173


>gi|238563299|ref|ZP_00439085.2| cystine ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|251768162|ref|ZP_02269699.2| cystine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|254199868|ref|ZP_04906234.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei FMH]
 gi|147749464|gb|EDK56538.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei FMH]
 gi|238520964|gb|EEP84419.1| cystine ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|243060612|gb|EES42798.1| cystine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
          Length = 240

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 69/127 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++ 
Sbjct: 113 IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 172

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     II  T Q + + L    +Y  L  ++         
Sbjct: 173 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYER 232

Query: 391 KIALKEK 397
           ++AL  +
Sbjct: 233 RLALPSR 239


>gi|190895058|ref|YP_001985351.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700719|gb|ACE94801.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|327194399|gb|EGE61259.1| putative amino acid ABC transporter permease [Rhizobium etli
           CNPAF512]
          Length = 213

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 79/153 (51%), Gaps = 11/153 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV + L Y L    P +G  N        P  ++  I LS  TAA+ AE +R G  
Sbjct: 58  GVPLLVQLLLIYNLL---PAIG-INV-------PSIVAAIIGLSLCTAAYQAENLRGGFA 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP G +E+A  +GLT R+  R + +P A+R   P L ++ + +LK SSL   VG  +L 
Sbjct: 107 SVPLGLLESAEMVGLTPRQVFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            +   +   T   ++I      IYL ++ ++AL
Sbjct: 167 RMAQDLAGSTFLPLQIFASAGLIYLMINWLVAL 199


>gi|325121844|gb|ADY81367.1| putative glutamine transport system permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 221

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           KAL  LY+    I  +P LVL+ + Y           F F   +  + +F ++++ +  +
Sbjct: 52  KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 96

Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  
Sbjct: 97  VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTR 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           ++K SSLAV +G  +++ VG  II  +   +    +W+  FI++ L  +I   ++RL A 
Sbjct: 157 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 215

Query: 392 I 392
           +
Sbjct: 216 L 216



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  R 
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRI 64

Query: 139 IPPLVVIFFLY 149
           IP LV++F  Y
Sbjct: 65  IPILVLLFVFY 75


>gi|304395379|ref|ZP_07377262.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304356673|gb|EFM21037.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 219

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V+P + +  +AL+ YT+AF+ +I    + A+P+GQ EA+  LGLT  +    V+ PQ
Sbjct: 81  GIDVAP-WTAASLALTFYTSAFLVDIWYGSIRALPKGQWEASRCLGLTFGQTLWRVVAPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 140 AIRIGIAPTVGFAVQVIKGTALASIIGFIELTKAGTILNNVTYQPFKV 187


>gi|227890102|ref|ZP_04007907.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849546|gb|EEJ59632.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 225

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 20/213 (9%)

Query: 185 TNAKIFVFSFVLGIVL-SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           T+  I V S ++G+ L +LF   + R    +  K +  +Y+  F +  +PT+VL+ L Y 
Sbjct: 24  TSVWIAVLSLIIGLALGALFG--VLRTSKSRLVKVIFRIYLEFFRM--VPTVVLLFLFYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +  QFN    ++V        IA + + +A  ++IVR  LI+VP+ Q E+ +AL
Sbjct: 80  I-----LPRQFNLNWPASVMA-----VIAFALWVSAEFSDIVRGTLISVPKIQRESGLAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    VLLPQA +  +P   +    ++K +SL + +   D+++VG  I+    Q 
Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189

Query: 364 IEIILIWM-----FIYLSLSIMIALFMNRLNAK 391
               + W+     F+Y  +   ++L+  RL+ +
Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222



 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T +L G   + W+A   +I    +G L G  R S ++LV  I R+Y+E FR +P +V++F
Sbjct: 16  TRLLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRMVPTVVLLF 75

Query: 147 FLY 149
             Y
Sbjct: 76  LFY 78


>gi|152998088|ref|YP_001342923.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150839012|gb|ABR72988.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 372

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 8/108 (7%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +A + AEI+R  + AVP+GQ+EA+ A+G  + K    V++PQA+R+ +P L + ++ L K
Sbjct: 249 SAVYKAEIIRGAIQAVPKGQIEASYAMGCGYWKTMAYVVMPQALRNSVPALITNFIGLFK 308

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            ++L + +G  +++      IN T    E    W+ ++    I+I+ F
Sbjct: 309 ETTLVMILGLLEVMGA----INATFHNAE----WLGLHAEGPIVISAF 348


>gi|76808570|ref|YP_333373.1| amino acid ABC transporter permease [Burkholderia pseudomallei
           1710b]
 gi|124383656|ref|YP_001026395.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia mallei NCTC 10229]
 gi|134282373|ref|ZP_01769078.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|254178565|ref|ZP_04885220.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|254206196|ref|ZP_04912548.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei JHU]
 gi|254297764|ref|ZP_04965217.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|254358594|ref|ZP_04974867.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei 2002721280]
 gi|76578023|gb|ABA47498.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1710b]
 gi|124291676|gb|ABN00945.1| cystine ABC transporter, permease protein [Burkholderia mallei NCTC
           10229]
 gi|134246411|gb|EBA46500.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|147753639|gb|EDK60704.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei JHU]
 gi|148027721|gb|EDK85742.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei 2002721280]
 gi|157807961|gb|EDO85131.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|160699604|gb|EDP89574.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei ATCC 10399]
          Length = 230

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 69/127 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++ 
Sbjct: 103 IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 162

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     II  T Q + + L    +Y  L  ++         
Sbjct: 163 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYER 222

Query: 391 KIALKEK 397
           ++AL  +
Sbjct: 223 RLALPSR 229


>gi|288871380|ref|ZP_06117360.2| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Clostridium hathewayi DSM 13479]
 gi|288863721|gb|EFC96019.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Clostridium hathewayi DSM 13479]
          Length = 283

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 65/117 (55%), Gaps = 1/117 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F + +I +S  T A++AE VR G++++  GQ E A A+G+TH +    V++PQA+R
Sbjct: 122 MSPMFAAYFI-VSINTGAYMAETVRGGILSIDPGQTEGAKAIGMTHFQTMVNVIMPQALR 180

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +I+P + +  +  +K++ +   +G  +L      +        E   I M IY  L+
Sbjct: 181 NIMPQIGNNLIINIKDTCVLSVIGVVELFYATKGVAGAYYTYFEAFTITMVIYFILT 237


>gi|239833864|ref|ZP_04682192.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821927|gb|EEQ93496.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 369

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 13/167 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALK 241
           TN  IF  S +L +V +L    ++R    K GK  P+  ++T    L  GLP ++ I   
Sbjct: 162 TNIVIFFVSAILILVWALVIA-IARTLPGKAGK--PIRVLATLYSDLFRGLPAIITI--- 215

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y + F  P+ G       S+ +   ++L +    YT+    E+ R+G+ +V   Q+ AA 
Sbjct: 216 YLIGFGLPLTGLPILKDLSSNAYAIIALTLTYGAYTS----EVYRAGIESVHPSQIAAAR 271

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +LGL++ +  R V++P A+R IIPPL +  ++L K+++L   +G  D
Sbjct: 272 SLGLSYARTMRYVVVPLAVRGIIPPLMNNCISLQKDTALVAIIGTID 318


>gi|167574646|ref|ZP_02367520.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia oklahomensis C6786]
          Length = 342

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 6/139 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V  GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 164 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDPGQLEAAAALGLPRARQATRIV-LPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 222 RAFLPVAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 378 SIMIALFMNRLNAKIALKE 396
             ++   + R  A+ A++ 
Sbjct: 282 LSIVQAQVERRYARGAVRN 300


>gi|83718672|ref|YP_443032.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|83652497|gb|ABC36560.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 274

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 18/208 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +F  V  +VL+L     SR         L   Y+S  ++ G P LV I   + +++  P
Sbjct: 84  MLFGLVGAVVLALMGIGGSRVL-----AGLARAYVS--VMRGTPLLVQI---FVIYYGLP 133

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG        ++ P    + IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+
Sbjct: 134 SLG-------VSLDPTPAGV-IALSANVAAYMSESMRGAINGIEKGQWLAAYSLGLSWRQ 185

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L 
Sbjct: 186 TLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 245

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +Y  L  ++         ++AL  +
Sbjct: 246 AAGVYWVLCQILEWVQRWYERRLALPSR 273


>gi|327188019|gb|EGE55249.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 260

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 7/119 (5%)

Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LVLI A  Y   F+  V G +         P+++   I L+   +A++AEI R  +++
Sbjct: 100 PHLVLIFATTYIFPFEIVVFGNY------LPFPDWLKAVIGLAIPASAYVAEITRGAILS 153

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +P  Q EAA  LG +  +A R ++LPQ +R  +PP  +   ++   +SLA  VG  +L+
Sbjct: 154 IPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELL 212



 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF----- 146
           GF+    ++ S M   T++GT+ G  +L   + V +    YV+ FRN P LV+IF     
Sbjct: 52  GFLMNVVISLSAMTLGTVVGTIFGILQLVPYRPVRYPVVAYVQAFRNAPHLVLIFATTYI 111

Query: 147 FLYKSVL--SVLPIPD 160
           F ++ V+  + LP PD
Sbjct: 112 FPFEIVVFGNYLPFPD 127


>gi|254449783|ref|ZP_05063220.1| ABC transporter, membrane spanning protein [Octadecabacter
           antarcticus 238]
 gi|198264189|gb|EDY88459.1| ABC transporter, membrane spanning protein [Octadecabacter
           antarcticus 238]
          Length = 201

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 5/134 (3%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP   ++ IAL+    A+  EI+R G+ ++PRGQ+EA  ALGL+  +  R ++L  
Sbjct: 63  GVRLSPTVTAI-IALAINGGAYAIEIIRGGVESIPRGQVEAGAALGLSRAQIFRDIVLVP 121

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+I P LTSQ++ L   SS+  ++  ++L      I + T ++ E+      +YL +S
Sbjct: 122 ALRAIYPALTSQFILLTLTSSVCSSISASELTHFAQRIESATFRSFEVYFTITGLYLLIS 181

Query: 379 ----IMIALFMNRL 388
                M+A+F  RL
Sbjct: 182 WMMMTMLAVFGRRL 195


>gi|304395378|ref|ZP_07377261.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304356672|gb|EFM21036.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 222

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 58/102 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LGLT  +    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRSQTFLRVVLPPALQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V + +L      I ++T  + E+ L+   IYL+LSI
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSI 203


>gi|296158679|ref|ZP_06841509.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891247|gb|EFG71035.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 248

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 1/101 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS VS  F    +++     AF++E++R+GL +VPR Q+EAA  + L   +   LVLLPQ
Sbjct: 91  GSEVS-LFTIATVSICIVATAFLSEVIRAGLESVPRQQIEAAEVMNLGFTRTLFLVLLPQ 149

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           + + I+PP  +  +  +K++SLA  +G  +L   G  ++N+
Sbjct: 150 SWKVILPPAFAFMVMFIKDTSLASQMGVVELTFTGKVLMNR 190


>gi|190894714|ref|YP_001985007.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700375|gb|ACE94457.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 219

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 22/213 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V +F+ G+       RLSR F  +   AL   YI  F      T + + L
Sbjct: 21  LTVMGSALALVMAFLAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 67

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P         G T++P   +  +AL     A+ AE+VR  + AV R Q EA 
Sbjct: 68  -FWVYFVLP-------FAGVTLTP-LQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +AL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+      +  QT
Sbjct: 119 VALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQT 178

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +      + +Y  +++ I+  M RL  ++A
Sbjct: 179 GNTLVPFATILILYFLMALAISAAMRRLERRMA 211


>gi|88808787|ref|ZP_01124297.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 7805]
 gi|88787775|gb|EAR18932.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 7805]
          Length = 335

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 8/98 (8%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R GL AV   Q+EAA ALGL   +  RLV+LPQA+R  +P LT+Q + LL+N+SL  
Sbjct: 213 EDLRGGLQAVSPTQIEAAAALGLGPWQIQRLVILPQALRIAVPALTNQAVGLLQNTSLMA 272

Query: 343 AVGFADLVSVGGTIINQT---GQAIEI-----ILIWMF 372
            +G  +L+ +  +++      G+ +E+      L W+F
Sbjct: 273 ILGLVELLGISQSLLANPAYIGRHLEVYVWLAALYWLF 310


>gi|319783614|ref|YP_004143090.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169502|gb|ADV13040.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 239

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 12/193 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL+ + +    + LP L       FG+P L+   ++Y   F   V    N          
Sbjct: 58  RLAANIYTTVFRGLPELVTLFLFFFGMPILLQHLVRY---FRPDVTIDVN---------S 105

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+   +++ +E+  S   A+P+GQ E   A+GL++    R V++PQ +R   P
Sbjct: 106 FVAGMIVLALIFSSYASEVFLSAFRAIPKGQYEGGYAIGLSNWLTMRKVIVPQLLRIAFP 165

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +L+LLK++SL   VG A+ +         T  A     +   ++L L+++ +   
Sbjct: 166 GLENCWLSLLKDTSLVSVVGLAETLRNASIAARVTKHAFLFFGVASLVFLGLAVLSSFAT 225

Query: 386 NRLNAKIALKEKK 398
           N +   +  +E +
Sbjct: 226 NAILRSLGRREAQ 238


>gi|307727080|ref|YP_003910293.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Burkholderia
           sp. CCGE1003]
 gi|307587605|gb|ADN61002.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. CCGE1003]
          Length = 219

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 8/148 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L +  PV G    I  S ++   + + +  +CYT+    E+ R+GL  V RGQ EAA 
Sbjct: 74  YVLFYVLPVYG----ITMSALTAGTVGIALHYACYTS----EVYRAGLNGVARGQWEAAC 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           AL L+  +    V+LPQA+R +IP L +  + + K++ +  A+   +L+     I ++T 
Sbjct: 126 ALSLSPWRTYSGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNIGSETF 185

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +E I +    +L +S+  A  + RL 
Sbjct: 186 RYLEPITLAGIFFLLISVSFAQLVRRLE 213


>gi|300172349|ref|YP_003771514.1| L-cystine permease [Leuconostoc gasicomitatum LMG 18811]
 gi|299886727|emb|CBL90695.1| L-cystine permease protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 248

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 63/113 (55%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L+I      AAF++EI+R+ L +VP  Q EAA+  G T R+    ++ PQA+   +P   
Sbjct: 100 LFITYGLNMAAFLSEIIRAALESVPATQREAALTSGYTKRQMYFKIIFPQAVIIAMPSFA 159

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +  ++LL+++SLA  +G  D+V     +   T   +E  +  M I++ LS ++
Sbjct: 160 TMVISLLQDTSLAFTIGVIDVVGKAKALGTATFHTVEAYISAMIIFVILSFIL 212


>gi|257483718|ref|ZP_05637759.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627332|ref|ZP_06460286.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289650581|ref|ZP_06481924.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330870382|gb|EGH05091.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330987163|gb|EGH85266.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331012129|gb|EGH92185.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 231

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)

Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260
           KT    PL ++ ST+  L+ G+P L+ + L Y             FD P L    F  G 
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAG- 99

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  
Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L + ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210


>gi|282849423|ref|ZP_06258808.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|282581127|gb|EFB86525.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
          Length = 238

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 54/87 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + +Y   + + AA+ AEI+RS + AV  G+ EAA +LG+T  ++   ++LPQA    
Sbjct: 95  PGLVFVYAVFTLHIAAYSAEIMRSSIDAVSPGEKEAAKSLGMTEFQSYVRIILPQAFTMS 154

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           IPPLT+  + +LK ++L   VG  D++
Sbjct: 155 IPPLTNLVIGMLKGTALIFNVGVVDMM 181


>gi|326793482|ref|YP_004311302.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326544246|gb|ADZ89466.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 220

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 3/122 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA-TRLVLLPQAMRSIIPPLTS 329
           IAL+    A+  EI+R+GL ++P+GQ+EAA  LG+T R+  TR++ +P A   I P LTS
Sbjct: 92  IALTINLGAYSTEIIRAGLGSIPKGQVEAAKVLGMTFRQTLTRVIFVP-AFEKIYPALTS 150

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q + ++  S++   +   +L      + ++  +A E  L+   +YL L+ MI  ++ +L 
Sbjct: 151 QCIIVMLGSAVISQISVEELTYAANLVQSRNFRAFESYLVTALLYLGLA-MIMRYVFKLI 209

Query: 390 AK 391
            K
Sbjct: 210 GK 211


>gi|293607250|ref|ZP_06689591.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292814342|gb|EFF73482.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 249

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+ L+ F   L R F      AL   Y+  +LI G P LV +   + + +  P +G
Sbjct: 53  SFALGLALA-FVVALIRLFGPAPLVALVRFYV--WLIRGTPLLVQL---FVIFYGLPSVG 106

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  +    A+ +E++R  + ++ +GQ EAA +L +T  +A R
Sbjct: 107 --------IVLDPLPAALIGFTLNVGAYNSEVIRGAIESITKGQWEAAYSLSMTRGQALR 158

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +LPQA R  +PPL++ ++ L+K++SLA  +   ++      I   T + + +      
Sbjct: 159 RTILPQAARVAVPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAAL 218

Query: 373 IYLSLSIMIALFMNRLNAK 391
           IYL  S +++    RL  +
Sbjct: 219 IYLVFSSVLSAAQVRLERR 237


>gi|171318276|ref|ZP_02907437.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171096540|gb|EDT41436.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 240

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261
           +LSRH   ++ + L  LY + F   G+P L++I   Y  +F    L    GQ+    G  
Sbjct: 47  KLSRH---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTTIGQWFGAEGFI 98

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G+      R +L+PQ +R
Sbjct: 99  GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRGMVLRRILVPQVLR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +   LK+S+L    G A+L+       + T Q     +    +YL ++ + 
Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYFVFFVAGGTLYLVMTGLS 218

Query: 382 ALFMNRLNAKIALKEKK 398
               NR  A +    ++
Sbjct: 219 NRVFNRAEAIVGRSFRR 235


>gi|167585065|ref|ZP_02377453.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 226

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 65/119 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ AE++R  + ++P+GQ EAA ++ +T  +A R  +LPQA R  +P L++ 
Sbjct: 94  IGFSLNVGAYNAEVIRGVIESIPKGQWEAAYSMAMTRAQALRRAILPQAARVALPALSNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++L+K++SLA  +   ++      I   T + + +      IYL  S +++    RL 
Sbjct: 154 FISLVKDTSLAAVLTVPEVFQAAQRIAAVTYEPLILYTEAALIYLLFSSVLSTLQQRLE 212


>gi|327192313|gb|EGE59278.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 236

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 22/213 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V +F+ G+       RLSR F  +   AL   YI  F      T + + L
Sbjct: 38  LTVMGSALALVMAFLAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 84

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P         G T++P   +  +AL     A+ AE+VR  + AV R Q EA 
Sbjct: 85  -FWVYFVLP-------FAGVTLTP-LQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC 135

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +AL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+      +  QT
Sbjct: 136 VALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQT 195

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +      + +Y  +++ I+  M RL  ++A
Sbjct: 196 GNTLVPFATILILYFLMALAISAAMRRLERRMA 228


>gi|326803172|ref|YP_004320990.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650650|gb|AEA00833.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 229

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL  Y  AF+AEI+R   +AV + Q EAA++LG+   +    ++ PQ +   +P LT+ 
Sbjct: 98  IALVAYNGAFMAEIIRPAYLAVGQDQKEAALSLGMIAWQRNWRIIFPQIIPIALPSLTTA 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII 357
            ++LLK++SL   +G  DL+     II
Sbjct: 158 VIDLLKDTSLLFLIGLVDLMGQAEIII 184


>gi|295115402|emb|CBL36249.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SM4/1]
          Length = 234

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 75/126 (59%), Gaps = 8/126 (6%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ +EI R+ ++++P+GQ EAA++LG+++ +    V+LPQA++  +PPL + ++ L+K+
Sbjct: 102 GAYSSEIFRAAILSIPKGQWEAAMSLGMSYPQQLIRVILPQAVKISVPPLFNSFIALVKD 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM---FIYLSLSIMIALFMNRLNAKIAL 394
           +SLA  +   ++      I   T +  E +L+++   FIYL    ++     ++  ++ L
Sbjct: 162 TSLAANITIPEMFLTTQRI---TARNYEPLLMYIEVGFIYLIFCTVLNYLQKKVEDRLML 218

Query: 395 --KEKK 398
              EKK
Sbjct: 219 TPHEKK 224


>gi|260460035|ref|ZP_05808288.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mesorhizobium opportunistum WSM2075]
 gi|259034246|gb|EEW35504.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 71/134 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I L  +   + AE+ R+G+  VPRGQ EAA A  L+ R+    +++PQA+  +
Sbjct: 86  PPLVAGVIGLGLHYGTYTAEVYRAGIDNVPRGQWEAAKACNLSGRQTWSHIIIPQAIPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L + ++ + K + L  A+   +L++   ++ N   + IE I +    +L++S+   +
Sbjct: 146 IPALANYFIAMFKETPLLSAITVLELMNQAKSVANTYYRYIEPITLVGAFFLAISLCSVI 205

Query: 384 FMNRLNAKIALKEK 397
            +  L  +    E+
Sbjct: 206 LLRWLERRYGKIER 219


>gi|167582028|ref|ZP_02374902.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167620193|ref|ZP_02388824.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257139261|ref|ZP_05587523.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 219

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 69/127 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++ 
Sbjct: 92  IALSANVAAYMSESMRGAINGIEKGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNS 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     II  T Q + + L    +Y  L  ++         
Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAGVYWVLCQILEWVQRWYER 211

Query: 391 KIALKEK 397
           ++AL  +
Sbjct: 212 RLALPSR 218


>gi|311280247|ref|YP_003942478.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749442|gb|ADO49194.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 238

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   +A+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R
Sbjct: 101 VSP-FLCGVIALSLLYSAYASQTLRGALKAVPIGQWESGQALGLSKSAIFFRLVMPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L +Q+L LLK+++L   +   DL+    +I  +T +     ++   IYL ++++ 
Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLS 219

Query: 382 ALFMNRLNAKIALKEKK 398
              + R++ +    E++
Sbjct: 220 QYILKRIDLRATRFERR 236


>gi|241895358|ref|ZP_04782654.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871332|gb|EER75083.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 233

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 59/94 (62%), Gaps = 1/94 (1%)

Query: 257 IGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           +G S +SP  +++    LS  T A+ +E +R+ + ++P  Q EAA ALG+T R+    ++
Sbjct: 89  LGISWLSPSGWIAAIWVLSLNTGAYASEAIRAAISSIPDTQREAAAALGMTDRQIFMRII 148

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           LPQA R  IP L + +++L+K++SLA  V   ++
Sbjct: 149 LPQATRISIPTLANSFISLVKDTSLASVVTIVEM 182


>gi|769792|emb|CAA60103.1| artQ [Escherichia coli K-12]
          Length = 238

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 8/186 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+L         L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPV--QMD-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++P  +R  +P L +Q+L
Sbjct: 111 LSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPADVRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +     ++   IYL ++++    + R++ + 
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRA 230

Query: 393 ALKEKK 398
              E++
Sbjct: 231 TRFERR 236


>gi|308185787|ref|YP_003929918.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056297|gb|ADO08469.1| putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 222

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 58/102 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LGLT  +    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRSQTFLRVVLPPALQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V + +L      I ++T  + E+ L+   IYL+LSI
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSI 203


>gi|238027538|ref|YP_002911769.1| amino acid ABC transporter permease [Burkholderia glumae BGR1]
 gi|237876732|gb|ACR29065.1| Amino acid ABC transporter, permease protein [Burkholderia glumae
           BGR1]
          Length = 219

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 18/208 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            VF  +  +VL+L         H +   A+  +Y+S  L+ G P LV I   + +++  P
Sbjct: 29  MVFGLIAAVVLALMGIA-----HSRVLNAIARVYVS--LMRGTPLLVQI---FVIYYGLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG        ++ P    + IALS   AA+++E +R  +  +  GQ  A+ +LGL+  +
Sbjct: 79  SLG-------ISLDPTPAGV-IALSANVAAYMSESMRGAINGIESGQWLASYSLGLSWSQ 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L 
Sbjct: 131 TLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLA 190

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +Y  L  ++         ++AL  +
Sbjct: 191 AAAVYWVLCQILEWVQRWCERRLALPGR 218


>gi|331695543|ref|YP_004331782.1| ectoine/hydroxyectoine ABC transporter permease EhuC
           [Pseudonocardia dioxanivorans CB1190]
 gi|326950232|gb|AEA23929.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Pseudonocardia dioxanivorans CB1190]
          Length = 236

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 18/174 (10%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG FL+      P   + T   I     VL IVLS F   L+     +T + +  +Y+  
Sbjct: 4   FGTFLSVLSQGLPETLIATIGGI-----VLTIVLS-FGAGLALLSPSRTVRVIARVYVE- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
               GL     +   + ++F  PVL  F  +      P +  + + L     A+ AEIVR
Sbjct: 57  ----GLRGTSEVVQLFWIYFALPVLVGFQLV------PIWAGILV-LGLNHGAYGAEIVR 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             + +VPR Q+E AIAL L+  +  R V+LPQA+  +IPP  + ++ LLK+++L
Sbjct: 106 GAVQSVPRAQVEGAIALSLSPAQRMRRVILPQAVVEMIPPFNNLFIQLLKSTAL 159


>gi|227823544|ref|YP_002827517.1| putative permease component of ABC transporter protein
           [Sinorhizobium fredii NGR234]
 gi|227342546|gb|ACP26764.1| putative permease component of ABC transporter protein
           [Sinorhizobium fredii NGR234]
          Length = 220

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 60/108 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     AF AE  R+ + AVPR Q++A IALGL   + T  ++LP A+R+ IP L + 
Sbjct: 94  LALGLNLMAFNAEAYRAAIQAVPREQLDAGIALGLNPLQRTLYIVLPTAVRASIPVLLTN 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + + + ++L   V   DL+    T+  +T + IE   I   +Y ++S
Sbjct: 154 GIGIFQQTALVAIVAVQDLMYQAKTLATETYRPIETFTIVALVYFAVS 201


>gi|225026585|ref|ZP_03715777.1| hypothetical protein EUBHAL_00835 [Eubacterium hallii DSM 3353]
 gi|224956077|gb|EEG37286.1| hypothetical protein EUBHAL_00835 [Eubacterium hallii DSM 3353]
          Length = 136

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 56/98 (57%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++  F +  IA     AA+ +EI R G+ +V +GQ EA   LG+T  +    ++L Q ++
Sbjct: 3   MNSRFTAAVIAFVINYAAYFSEIYRGGIESVSKGQYEAGQVLGMTKTQIFFKIILLQVIK 62

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            IIPPL+++ + L K++SLA  +G A+++        Q
Sbjct: 63  RIIPPLSNEVITLTKDTSLARIIGLAEIIMCAERFTKQ 100


>gi|206559442|ref|YP_002230203.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|198035480|emb|CAR51358.1| histidine transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 229

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269
           H +  +A+   Y  T LI  +P LVL+ L +  +  +  L QF + +G + +  + F++ 
Sbjct: 42  HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWNQIDIDPFVAG 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L     A+  E  R   ++VPRGQ+EA  A G++  +    ++ PQ MR  +P + +
Sbjct: 98  VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGN 157

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  L+K ++L   +G AD+V         T      IL+   IYL+++ +  L + +L 
Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217

Query: 390 AKIALKEKK 398
            + ++  + 
Sbjct: 218 KRYSMGVRH 226


>gi|294794720|ref|ZP_06759855.1| amino acid ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|313894094|ref|ZP_07827660.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|294454082|gb|EFG22456.1| amino acid ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|313441658|gb|EFR60084.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 238

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 54/87 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + +Y   + + AA+ AEI+RS + AV  G+ EAA +LG+T  ++   ++LPQA    
Sbjct: 95  PGLVFVYAVFTLHIAAYSAEIMRSSIDAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMS 154

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           IPPLT+  + +LK ++L   VG  D++
Sbjct: 155 IPPLTNLVIGMLKGTALIFNVGVVDMM 181


>gi|121602538|ref|YP_988957.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Bartonella bacilliformis KC583]
 gi|121602648|ref|YP_988988.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Bartonella bacilliformis KC583]
 gi|120614715|gb|ABM45316.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Bartonella bacilliformis KC583]
 gi|120614825|gb|ABM45426.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Bartonella bacilliformis KC583]
          Length = 238

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 57/88 (64%), Gaps = 8/88 (9%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + AA+ AEI+R+G+ ++ +GQ +A  ALG+T+ +   +V+LPQA R+++P   +Q
Sbjct: 113 ITFTAFEAAYFAEIMRAGIHSISQGQKQAGHALGMTYWQNMYIVILPQAFRNMLPVFLTQ 172

Query: 331 YLNLLKNSSLAVAV-------GFADLVS 351
            + L ++++L  A+       GF DLVS
Sbjct: 173 VIILFQDTTLVYAISGNSLLNGF-DLVS 199


>gi|34498541|ref|NP_902756.1| histidine transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34104397|gb|AAQ60755.1| histidine transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 228

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 25/227 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVL 237
           LT+       V S  LG+V +LF +  SR          PL  ++ F   ++ G+P LV 
Sbjct: 15  LTLKLAGTALVVSVALGLVGALFKSSHSR----------PLTLLAEFYSTVVRGVPDLVW 64

Query: 238 IALKY---QLHFDKPVLGQFNFIGGSTVSPE---FMSLYIALSCYTAAFIAEIVRSGLIA 291
           + L +   Q+  +  + G F +      SP+   F +    L     A++ E  R  ++A
Sbjct: 65  MFLLFFGAQMALND-LCGYFGW-----QSPDIDPFAAGVATLGFIFGAYMTETFRGAMMA 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEA +A G+T  +    + LPQ +R  +P  ++ +L L+K+++L   +G  D++ 
Sbjct: 119 VHKGQMEAGLAYGMTPLRVFFRIQLPQMVRYALPSFSNNWLVLVKSTALVSVIGLNDVMY 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 + T Q  ++ ++   ++L ++ +  L ++ L  + ++  K+
Sbjct: 179 RADAAKSATQQPFDVYIVVGALFLVVTGVSNLLLHWLEKRYSMGTKE 225


>gi|238786386|ref|ZP_04630316.1| Arginine transport system permease protein artQ [Yersinia
           bercovieri ATCC 43970]
 gi|238712713|gb|EEQ04795.1| Arginine transport system permease protein artQ [Yersinia
           bercovieri ATCC 43970]
          Length = 238

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFA----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V +  LG+VL+ LFA    +RL    +  TG     + LP + +  F+ FG   L+++  
Sbjct: 19  VCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78

Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L+ F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYMIAAAIYLVVTLL 218


>gi|306841172|ref|ZP_07473888.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306845330|ref|ZP_07477905.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306274246|gb|EFM56058.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306288798|gb|EFM60116.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 215

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV + L Y L    PV+G           P  ++  + +    +A+I+EI R  ++
Sbjct: 63  GVPLLVQLLLFYYLL---PVIG--------IDVPALVAAVVTVGICASAYISEIWRGAIV 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EAA A+G+  R     V+LPQA    +P L ++ + L+K SSL   VG  +L 
Sbjct: 112 ALPKGQSEAATAIGMGPRDIWVRVVLPQAFTMSLPALVNELILLVKASSLVSVVGILELT 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
                    T + +E+ L    IYL +++ +A
Sbjct: 172 RASQAQAAMTFRPLEVYLAAACIYLLINLCLA 203


>gi|289672220|ref|ZP_06493110.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 188

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 64/115 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P
Sbjct: 53  FAAGVIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALP 112

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            L + ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++
Sbjct: 113 GLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 167


>gi|237653224|ref|YP_002889538.1| polar amino acid ABC transporter inner membrane subunit [Thauera
           sp. MZ1T]
 gi|237624471|gb|ACR01161.1| polar amino acid ABC transporter, inner membrane subunit [Thauera
           sp. MZ1T]
          Length = 244

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 9/181 (4%)

Query: 226 TFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           T+   G P LV + L Y    Q  + +      + +      P F +L+ A    T A+ 
Sbjct: 60  TYFFRGTPMLVQLLLVYYGASQWEWMRAAWEAGHPLWSLFREPYFCALF-AFGLNTCAYT 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+   +   P G++EAA A+G+T  KA + +++P A+R +IP  +++ + +L+ S++A
Sbjct: 119 VEILAGSMRNTPHGELEAAKAMGMTRLKALQRIVIPSALRRMIPSYSNEVILMLQGSAIA 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALFM---NRLNAKIALKEK 397
            AV   DL      + ++     E  +    IYL+L+  ++ LF    +R  A +A ++ 
Sbjct: 179 SAVTLVDLTGAARNVYSRHFAPFESFVFVGLIYLALTFALVGLFKLAEHRWLAHLAPRKA 238

Query: 398 K 398
           +
Sbjct: 239 E 239


>gi|134296591|ref|YP_001120326.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134139748|gb|ABO55491.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 229

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 10/180 (5%)

Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           + T LI G+P LVL+     +L+  L+     LG         + P F++  + L     
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQI----DIDP-FLAGVLVLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K++
Sbjct: 107 AYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKST 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L   +G AD+V         T +     LI   +YL+++ M    +  L  + +   +K
Sbjct: 167 ALVSIIGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAITTMSNFVLMWLEKRYSTGVRK 226


>gi|325689403|gb|EGD31408.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 225

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 87/185 (47%), Gaps = 23/185 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247
           + S +LG    +  T      H K  + L   Y+    I  +P LVL+ L Y     +FD
Sbjct: 34  IISLILGTFFGIIMTS-----HSKVVRFLSRAYLE--FIRVMPQLVLLFLVYFGLARNFD 86

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             + G+             +S  I  S +  A + ++VR  + ++P+ Q E+  ALGL+ 
Sbjct: 87  INISGE-------------LSAIIVFSLWGTAEMGDLVRGAITSLPKHQFESGQALGLSQ 133

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    +++PQ +R ++P   +    ++K +SL V +G  ++V VG  II+    +I   
Sbjct: 134 RQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQIIDSNRLSIPSA 193

Query: 368 LIWMF 372
             W++
Sbjct: 194 AFWIY 198


>gi|190895403|ref|YP_001985695.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190699348|gb|ACE93432.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 234

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA ++G++
Sbjct: 76  LGQFGVIRYSFIWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT + +E+
Sbjct: 136 GFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195

Query: 367 ILIWMFIYLSLSIMI 381
            L    IYL L+ +I
Sbjct: 196 FLCAAIIYLVLNFII 210


>gi|307544954|ref|YP_003897433.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216978|emb|CBV42248.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 259

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++AL+   A +  E++R G   VP+G++EAA +LG+      R + LP+A++ ++P L  
Sbjct: 130 FVALTLSFAGYEGEVMRGGFAGVPKGELEAARSLGMHPLTILRRIWLPRAVQRVLPTLNG 189

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +  LK + L   +   D  +V G I  +T    E +L+   IYL L+ +I L    L 
Sbjct: 190 ELIIQLKATPLVATIAAVDTYAVFGRIRQETYMVYEPLLLMALIYLILAGLITLAFGALE 249

Query: 390 A 390
            
Sbjct: 250 C 250


>gi|304393286|ref|ZP_07375214.1| octopine transport system permease protein OccM [Ahrensia sp.
           R2A130]
 gi|303294293|gb|EFL88665.1| octopine transport system permease protein OccM [Ahrensia sp.
           R2A130]
          Length = 232

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 65/115 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+   I+R    +VP+G++EAA A+G+      R + LP+A+++++P L  + +  LK+
Sbjct: 112 AAYEGHIMRGAFASVPKGELEAARAMGMGRFTVLRRIWLPRAIQNVLPTLAGEAVLTLKS 171

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             LA  +   D+  VGG +  +T +  E ++   FIYL ++ ++ +    L  ++
Sbjct: 172 VPLASTITIFDVFGVGGIVRQETYRIYEPLIFVGFIYLLITAVLVVLFRWLENRV 226


>gi|260439248|ref|ZP_05793064.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Butyrivibrio crossotus DSM
           2876]
 gi|292808262|gb|EFF67467.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Butyrivibrio crossotus DSM
           2876]
          Length = 236

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 52/73 (71%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+I+EI+R G+++V  GQMEA  A+GL+       +++PQA+++I+P + ++ + L+K
Sbjct: 114 SAAYISEIMRGGIMSVDSGQMEAGRAVGLSFGTTMLKIVIPQAVKNILPTMGNELIALIK 173

Query: 337 NSSLAVAVGFADL 349
           ++S+   VG  DL
Sbjct: 174 DTSVVSFVGATDL 186


>gi|126641443|ref|YP_001084427.1| ArtM protein [Acinetobacter baumannii ATCC 17978]
          Length = 178

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           KAL  LY+    I  +P LVL+ + Y           F F   +  + +F ++++ +  +
Sbjct: 9   KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 53

Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  
Sbjct: 54  VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTR 113

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           ++K SSLAV +G  +++ VG  II  +   +    +W+  FI++ L  +I   ++RL A 
Sbjct: 114 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 172

Query: 392 I 392
           +
Sbjct: 173 L 173


>gi|330958425|gb|EGH58685.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 225

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 3/93 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ +EI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ +Q + LLK 
Sbjct: 103 SAYGSEIIRSALINVSQGQRDAVRALDFGPVSAFRRIILPQALPFMIPPMGNQLVELLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           +SL   +   DL   G  ++   GQ     LIW
Sbjct: 163 TSLVSLITLTDLTFSGSQLVTTLGQQ---TLIW 192


>gi|330954815|gb|EGH55075.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 231

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)

Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260
           KT    PL ++ ST+  L+ G+P L+ + L Y             FD P L    F  G 
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAG- 99

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  
Sbjct: 100 ---------VIALGICFGAYATELFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L + ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVL 210


>gi|320546922|ref|ZP_08041224.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus equinus ATCC 9812]
 gi|320448440|gb|EFW89181.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus equinus ATCC 9812]
          Length = 225

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 57/102 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A + ++VR  L ++P+ Q+E+  ALGL +R+    V++PQ +R ++P   + 
Sbjct: 97  IVFSMWGTAEMGDLVRGALTSLPKYQIESGFALGLNNRQLFIYVVMPQILRQLLPQAVNL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
              ++K +SL V +G  ++V VG  II      +    IW++
Sbjct: 157 MTRMIKTTSLIVLIGVVEVVKVGQEIIEANRLTVPSTAIWIY 198


>gi|298291225|ref|YP_003693164.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927736|gb|ADH88545.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 248

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 68/122 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS +  AF  EI RSG+ AVP+  +EAA ALG T  KA   V+LP A+R  +P L + 
Sbjct: 120 IALSLFAGAFNVEIFRSGIEAVPKTTVEAAEALGYTRLKAYVYVILPLALRVCLPALNNN 179

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NLLK ++LA A+   + +     I +++    E++L+    Y  L  ++   M+R   
Sbjct: 180 LVNLLKTTTLAYAIAVPETLYAVKQIWSESQNVFEMMLVLFVTYGILVGILVWIMHRWEK 239

Query: 391 KI 392
            +
Sbjct: 240 SL 241


>gi|220928329|ref|YP_002505238.1| polar amino acid ABC transporter inner membrane subunit
           [Clostridium cellulolyticum H10]
 gi|219998657|gb|ACL75258.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulolyticum H10]
          Length = 210

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 52/85 (61%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA     AA+ AEI R G+ ++P+GQ EA   LG T  +    ++LPQ ++ ++
Sbjct: 80  RFTAAVIAFILNYAAYFAEIFRGGIESIPKGQYEAGEVLGFTKLQVFFKIILPQVIKRVL 139

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
           PP++++ + L+K+++L   +G  ++
Sbjct: 140 PPISNEVITLVKDTALVTVIGVEEM 164


>gi|91780749|ref|YP_555956.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693409|gb|ABE36606.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 218

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 61/102 (59%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           + ++AEI R+G+ AV  GQ EAA ++G+   K    V+LPQA++  +PP ++  + +LK+
Sbjct: 98  STYVAEIFRAGIEAVDPGQYEAAQSIGMGRVKTMVRVILPQAIKVALPPYSNTLVMMLKD 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SSLA  +  A++   G  I   T Q + +  +    YL++S+
Sbjct: 158 SSLASTITVAEMTREGQLIAASTFQNLTVYTLVAIGYLAMSL 199


>gi|295106092|emb|CBL03635.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 217

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 68/119 (57%), Gaps = 9/119 (7%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  EI R G+ ++PRGQ EAA  LG +  +    ++LPQ ++ I+P ++++ + L+K+
Sbjct: 99  AAYFGEIYRGGIQSIPRGQYEAAEVLGYSKLQTFMKIVLPQVVKRILPAMSNEIITLVKD 158

Query: 338 SSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +G  ++ S    +  + ++     I  ++ W+F     + ++ + + R+  K+
Sbjct: 159 TSLAFVLGIMEMFSQAKAIAASQVSMLPYVIAGVIYWVF-----NFIVEIVLTRIEKKL 212


>gi|259418369|ref|ZP_05742287.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
 gi|259345764|gb|EEW57608.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
          Length = 224

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 53/81 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A++AE +R+ ++ V R Q EAA A+G+T  +  R ++LPQA R   P L + 
Sbjct: 97  MGLTLHFSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQIILPQAARVAAPTLVNY 156

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +++++K +SLA  +G  +L+ 
Sbjct: 157 FIDMIKGTSLAFTLGVTELMG 177


>gi|298290177|ref|YP_003692116.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926688|gb|ADH87497.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 221

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 1/139 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F  I G   +P F    + L+ Y +A+  EIVRSG +AVP     AA +LG+T R+   
Sbjct: 79  SFKTIVGINWAP-FTVSCVVLALYMSAYCTEIVRSGFLAVPSTTRRAARSLGMTWRQDLT 137

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ P A+R  +P      L ++K++++   +G  +L+     I+ +  + + ++ I   
Sbjct: 138 DIVFPIALRVALPSWIGLTLGVMKDTAMVWWIGVVELLRSSQVIVTRIQEPLFVLSIAGL 197

Query: 373 IYLSLSIMIALFMNRLNAK 391
           IY  +S  IA    RL A+
Sbjct: 198 IYFLMSFPIARLGARLEAR 216


>gi|325062400|gb|ADY66090.1| polar amino acid uptake family ABC transporter, permease protein
           [Agrobacterium sp. H13-3]
          Length = 238

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 68/128 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    I+LS +  A   E  RSG+  +PR  +EAA +LG +       V  P A+R  +P
Sbjct: 103 FACASISLSLFGGALAIEAFRSGIETMPRSIIEAARSLGYSRWSRFWKVEAPIAVRISLP 162

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +T+   NL K +S A  +   +L+   G I N T + +E++++ + IY+ L  ++   M
Sbjct: 163 AITNILTNLFKTTSQASVITVPELMYYAGQIYNDTFRTLEVMILVLVIYVGLVSILTFAM 222

Query: 386 NRLNAKIA 393
           +RL A +A
Sbjct: 223 SRLEAWMA 230


>gi|313890259|ref|ZP_07823893.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121364|gb|EFR44469.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 215

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 48/73 (65%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL  V  GQ EA +A GL   +   L++ PQA R ++P + SQ+
Sbjct: 87  AFTVFTSAALAEIIRGGLNGVDNGQTEAGLAQGLRPSQVFLLIVFPQAYRKMLPAIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 147 VTVIKDTSLLYSV 159



 Score = 40.4 bits (93), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T +++F  +I +TI GTL+   R   NK V  +   Y+E  RN+P L+ IF ++
Sbjct: 20  TLYISFISIILSTIFGTLLAIMRNGKNKFVKLLASFYIEFVRNVPNLLWIFIIF 73


>gi|239833264|ref|ZP_04681592.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821327|gb|EEQ92896.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 225

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+    A+ AEI+R+G  ++  GQ EA   LGL+  +    V L  AM  + P LTSQ
Sbjct: 93  VALTVNVGAYTAEIMRAGFDSIQEGQWEAGECLGLSSTQLYWHVGLRPAMERVYPALTSQ 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
           ++ L+  SS+   +   +L + G  I ++T +  E  L+   IYL LS+ M ALF
Sbjct: 153 FILLMLASSVTSQISAEELTAAGNFIQSETYRPFETYLVIAVIYLFLSLGMRALF 207


>gi|254444336|ref|ZP_05057812.1| ABC transporter, permease protein, putative [Verrucomicrobiae
           bacterium DG1235]
 gi|198258644|gb|EDY82952.1| ABC transporter, permease protein, putative [Verrucomicrobiae
           bacterium DG1235]
          Length = 262

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 9/204 (4%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F+ G ++++  + LS  F    G    L Y S FL    P   L  +  ++    P+L Q
Sbjct: 59  FIEGWLVTVLVSSLSLAFACLIGGLSALAYRSRFL----PLRYLFKIYVEITRGTPLLVQ 114

Query: 254 -----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                + F   + +   ++   I LS ++ A+++EI R+G+ +V   Q+ +A ++G T  
Sbjct: 115 MLLIFYVFADAAHIENRYVVGIIILSLFSGAYVSEIFRAGIESVGSSQLLSAKSIGFTPY 174

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V+ PQA+   +P L  Q+ NL+K+SSL   +  ++       +   T  A E   
Sbjct: 175 QTFRYVIFPQALSRSLPALAGQFANLIKDSSLLSIIAISEFTLNAQEVNTSTLSAFESFF 234

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
                YL L++ I     RL  ++
Sbjct: 235 PLAIGYLLLTLPIFHLSRRLEKQL 258


>gi|296272954|ref|YP_003655585.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097128|gb|ADG93078.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 221

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 84/156 (53%), Gaps = 5/156 (3%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+A  + L+F  P +  F F+   T    + +  IAL+  T++F+AE +R  L ++ +GQ
Sbjct: 67  LVAQLFILYFGLPSI--FPFLESMTA---YEATVIALTLNTSSFMAEDLRGALESIDKGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA  ++G+T  +  + V+LPQA    +P + ++++ ++K ++L   VG AD+++     
Sbjct: 122 NEACYSMGMTKFQTMKRVILPQAFIFALPSIGNRFIGIIKGTALGFTVGLADIMAKSKIE 181

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              + +  E  L    IYL L I++   +  +  ++
Sbjct: 182 AALSLRFFEAYLCVTIIYLVLVIIVERVLKYIEKRV 217


>gi|91784299|ref|YP_559505.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|91688253|gb|ABE31453.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 218

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 26/213 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFD 247
           FV S  LG+VL+L     +R               +TF+  I GLP +V +   + ++F 
Sbjct: 28  FVLSTALGLVLALMRVSGNRVVSNAA---------ATFINVIRGLPIIVQL---FYIYFV 75

Query: 248 KPVLG-QFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            P LG Q + F  GS      + L +A S Y A    E  R+G+ A+  GQ+EAA ++G+
Sbjct: 76  LPDLGVQLSAFQAGS------IGLGVAYSVYQA----ENFRAGIQAIDHGQIEAAQSIGM 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
                 R V+LPQA R  +P   +  + +LK+SSLA  +  A++   G  I + T Q + 
Sbjct: 126 RGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQLIASSTFQNMT 185

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  +   +YL LS+ +   + R+  ++ LK K+
Sbjct: 186 VFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR 218


>gi|260424825|ref|ZP_05779011.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403293|gb|EEW96840.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 244

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 40/221 (18%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALPLLYISTFLIFGLPT 234
           T+   A     SF+ G+V+S+   R       LS  + E + +  PLL    FL FGLP 
Sbjct: 41  TLGIGAAGIFLSFLAGLVISVIRYRKIPFLLPLSTAYVELS-RNTPLLVQLFFLYFGLP- 98

Query: 235 LVLIALKYQLHFDKPVLGQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                 K  +H            F+GGS                   ++AE +RSG+ +V
Sbjct: 99  ------KAGIHISGETCAAAGLTFLGGS-------------------YMAEALRSGIESV 133

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
              Q E+A ALGLT  +  R V+ PQA    +PPL +  L L+K +S+       DL+ +
Sbjct: 134 SVSQYESAAALGLTEHQIFRFVVFPQAFTVSLPPLCANVLFLIKETSVFSVCAVPDLMYI 193

Query: 353 GGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
              +I    +T + + +++I ++ I L +S   +L   RL 
Sbjct: 194 AKDLIGLYYKTDETLWMLVISYLIILLPISAGSSLLERRLR 234


>gi|193077067|gb|ABO11825.2| ArtM protein [Acinetobacter baumannii ATCC 17978]
          Length = 206

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 21/181 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           KAL  LY+    I  +P LVL+ + Y           F F   +  + +F ++++ +  +
Sbjct: 37  KALCRLYLEAIRI--IPILVLLFVFY-----------FGF--ATWFNWQFSAMWVCVVVF 81

Query: 277 T---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  
Sbjct: 82  VLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTR 141

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           ++K SSLAV +G  +++ VG  II  +   +    +W+  FI++ L  +I   ++RL A 
Sbjct: 142 MVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAH 200

Query: 392 I 392
           +
Sbjct: 201 L 201



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 30/51 (58%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +AF  +  + I GT+ G    S N +V  +CR+Y+E  R IP LV++F  Y
Sbjct: 10  IAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRIIPILVLLFVFY 60


>gi|329937973|ref|ZP_08287455.1| amino acid ABC transporter transmembrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302930|gb|EGG46819.1| amino acid ABC transporter transmembrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 216

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 28/171 (16%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+V +L     +R      G       + T  I   P LV      QL F   VL 
Sbjct: 33  SFALGLVWALLMRTPTRWVRWPVG-------VVTEFIRNTPLLV------QLFFLFYVLP 79

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           ++N    +  +  F     A+  + + +  ++ R+G+ AVP GQ EAA AL L  R+   
Sbjct: 80  EWNITFSALTTGVF-----AIGLHYSTYTMQVYRAGIEAVPVGQWEAATALNLPLRRTWT 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            V+LPQA+R ++P L +  +++LK++ L +A+          T++   GQA
Sbjct: 135 AVILPQAIRRVVPALGNYVISMLKDTPLLMAI----------TVLEMLGQA 175


>gi|313667602|ref|YP_004047886.1| ABC transporter [Neisseria lactamica ST-640]
 gi|313005064|emb|CBN86496.1| putative ABC transporter [Neisseria lactamica 020-06]
          Length = 222

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 53/85 (62%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+ R+  R + LPQ++R ++P   + +  ++
Sbjct: 99  WGVAEMGDLVRGALESIEKHQVESGLALGLSRRQVFRYIELPQSVRRVLPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|77461681|ref|YP_351188.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77385684|gb|ABA77197.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 226

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 24/172 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L                       G  +S E+ +  +A+     A
Sbjct: 68  PFLVQLFFIFFGLPSL-----------------------GVQIS-EWQAAVLAMVINLGA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  EI+R+G+ A+PRGQ+EAA AL ++  +A R V+L  A+  + P L+SQ + ++  S+
Sbjct: 104 YSTEIIRAGIQAIPRGQLEAAAALAMSRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSA 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   +L      I ++  +A E   +   IYL ++++I   +N L  +
Sbjct: 164 VCSQIATEELSFAANFIQSRNFRAFETYALTTLIYLCMALLIRQLLNWLGRR 215


>gi|83942406|ref|ZP_00954867.1| amino acid ABC transproter, permease protein [Sulfitobacter sp.
           EE-36]
 gi|83953626|ref|ZP_00962347.1| amino acid ABC transproter, permease protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83841571|gb|EAP80740.1| amino acid ABC transproter, permease protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83846499|gb|EAP84375.1| amino acid ABC transproter, permease protein [Sulfitobacter sp.
           EE-36]
          Length = 224

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 53/81 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ + +A++AE +R+ ++ V R Q EAA A+G+T  +  R ++LPQA R   P L + 
Sbjct: 97  MGLTLHFSAYMAESIRAAILGVDRSQWEAAQAVGMTQGQMMRQIILPQASRVAAPTLVNY 156

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +++++K +SLA  +G  +L+ 
Sbjct: 157 FIDMIKGTSLAFTLGVTELMG 177


>gi|18310307|ref|NP_562241.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|110800931|ref|YP_695975.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           perfringens ATCC 13124]
 gi|18144987|dbj|BAB81031.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
 gi|110675578|gb|ABG84565.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens ATCC 13124]
          Length = 213

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA +   AA+  EI RSG+  + RGQ EA+  LGL+     + ++LPQ+ +  +
Sbjct: 83  RFPAAIIAFTLNYAAYFGEIFRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTL 142

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           P + ++ + L+K++SL   VG  +L+  G    N+   
Sbjct: 143 PSIANEVITLVKDTSLVYVVGIGELLRAGKIASNRDAS 180


>gi|330817962|ref|YP_004361667.1| histidine transport system permease [Burkholderia gladioli BSR3]
 gi|327370355|gb|AEA61711.1| histidine transport system permease [Burkholderia gladioli BSR3]
          Length = 229

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 10/186 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYIST 226
           MFL   G    + T  T  K+ V S +L  +L L     +LSR+   +    +  LY  T
Sbjct: 1   MFLQGYGPLILSGTWQT-VKLAVLSLILSFILGLLGAGAKLSRN---RVTNGIGTLY--T 54

Query: 227 FLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            LI G+P LVL+ L  Y +      L          + P F +  + L     A+  E  
Sbjct: 55  TLIRGVPDLVLMLLLFYSIQIWLNQLTDMMSWDQIDIDP-FAAGVLVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   ++VPRGQ+EA  A G++  +    V+ PQ MR  +P + + +  L+K+++L   +G
Sbjct: 114 RGAFLSVPRGQLEAGAAYGMSSWQVFTRVMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173

Query: 346 FADLVS 351
            AD+V 
Sbjct: 174 LADVVK 179


>gi|296272082|ref|YP_003654713.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096257|gb|ADG92207.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 224

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 15/202 (7%)

Query: 195 VLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250
           ++G V++LF   L    + +  K       LYIS   + G P LV L  L Y L    PV
Sbjct: 28  LIGTVIALFIAILIAIMKTYKVKVISQFCDLYIS--FLRGTPLLVQLFLLYYGLPQIFPV 85

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               +    S            LS + +A++AE +R  + ++ +GQ EA+ +LGL++ + 
Sbjct: 86  FANLDSYSASIA---------GLSLHFSAYMAESIRGAISSIDKGQFEASSSLGLSNTQT 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+R  +P L + +++L+K++SLA  +G  ++++      + + +  E  L  
Sbjct: 137 FIYIILPQAIRVAVPSLMNNFIDLIKSTSLAFTLGVPEIMAKAQLEASSSYKYFESFLAV 196

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             +Y  + ++      +L  K+
Sbjct: 197 ALVYWVIVLVFTYIQKKLEKKL 218


>gi|288934310|ref|YP_003438369.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288889039|gb|ADC57357.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 250

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 62/111 (55%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A+ AE  R+G  AV +GQ EAA ++GL+     R ++ PQA  S +P  TS  
Sbjct: 106 ALSLIFSAYFAETFRAGWNAVDKGQREAAWSIGLSGFTQFRRIIFPQAAVSALPNFTSVL 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++L+K++SL   +   DL++       +    +E   + + IY++L + IA
Sbjct: 166 IDLIKDTSLVYTITVIDLMAKANIAAARGFHFVEAYCVVLVIYIALCLAIA 216


>gi|239941506|ref|ZP_04693443.1| putative amino acid ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239987970|ref|ZP_04708634.1| putative amino acid ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291444950|ref|ZP_06584340.1| ABC polar amino acid family transporter [Streptomyces roseosporus
           NRRL 15998]
 gi|291347897|gb|EFE74801.1| ABC polar amino acid family transporter [Streptomyces roseosporus
           NRRL 15998]
          Length = 213

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 1/134 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +TV P ++ + + L  + AA+ +E+ R+G+  VP+GQ EA  AL L+ R+  + V+LPQA
Sbjct: 80  NTVEPLYIGIAV-LGIHYAAYTSEVYRAGIDGVPKGQWEACRALSLSPRRTWQAVILPQA 138

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R+++P L +  +++ K +     +   ++V              E+  +   I+L  S 
Sbjct: 139 VRNVLPALGNYAISMFKETPFLAVITVQEMVFEARKYGADHFAYTEVFTLAGLIFLVASY 198

Query: 380 MIALFMNRLNAKIA 393
             +L M +L  ++ 
Sbjct: 199 PTSLLMRKLEKRLG 212


>gi|187923120|ref|YP_001894762.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714314|gb|ACD15538.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 229

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 17/165 (10%)

Query: 192 FSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247
           F+FVLG++ +  A +LS++ F    G       + T L+ G+P LVL+ L +   Q+  +
Sbjct: 27  FAFVLGLLGA--AAKLSKNRFSYGVGT------VYTTLVRGVPDLVLMLLLFYSIQIWLN 78

Query: 248 KPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  + +G   +  + F++    L     A+  E  R   +AVPRGQ+EA  A G+T
Sbjct: 79  NLT----DLLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMT 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
             +    V+ PQ MR  +P + + +  ++K ++L   +G AD+V 
Sbjct: 135 GWQVFTRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVK 179


>gi|70733846|ref|YP_257486.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348145|gb|AAY95751.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 230

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 23/193 (11%)

Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260
           KT    PL ++    + ++ G+P L+ + L Y            HF  P L         
Sbjct: 41  KTSPYKPLRWLGETYSTIVRGVPELLWVLLIYYGTVNMMSALGEHFGNPDL--------- 91

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +SP F++  IAL     A+  E+ R  ++A+P+G  EA  ALGL+  +    ++LPQ  
Sbjct: 92  ALSP-FLAGVIALGLCFGAYATEVFRGAILAIPKGHREAGTALGLSKFRIFSRLILPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L + ++ L+K+++L   +G  +++      +          ++  F+YL L+++
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQNAVTFAKHPFTFFMVAAFMYLGLTVL 210

Query: 381 IALFMNRLNAKIA 393
               M+ L  + A
Sbjct: 211 AMTGMHFLEKRAA 223


>gi|296139760|ref|YP_003647003.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296027894|gb|ADG78664.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 307

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 72/128 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + +  I +  + AA+ +EIVR+G++ V  GQ +AA ALG+        + LPQA+R+I+P
Sbjct: 162 YTAAVIGIVLHQAAYGSEIVRAGILGVAPGQHDAARALGIPPVAHLLRITLPQALRTIVP 221

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  ++ + LLK ++    +   DL      I  + G+ I ++L+ +  Y  L+ ++++  
Sbjct: 222 PAANEVIGLLKGTTAVFILALPDLFYQVQVIYGRNGRIIPLLLVAVAWYAILTTVLSIGQ 281

Query: 386 NRLNAKIA 393
           + +  +++
Sbjct: 282 HSVEKRLS 289


>gi|171316941|ref|ZP_02906148.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097865|gb|EDT42685.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 229

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 6/189 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269
           H +  +A+   Y  T LI  +P LVL+ L +  +  +  L QF + +G   +  + F++ 
Sbjct: 42  HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWEQIDIDPFVAG 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L     A+  E  R   ++VPRGQ+EA  A G++  +    ++ PQ MR  +P + +
Sbjct: 98  VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGN 157

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  L+K ++L   +G AD+V         T      ILI   IYL+++ +  L + +L 
Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIQLE 217

Query: 390 AKIALKEKK 398
            + ++  + 
Sbjct: 218 KRYSMGVRH 226


>gi|50086541|ref|YP_048051.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           ADP1]
 gi|49532515|emb|CAG70229.1| putative amino acid transport protein (ABC superfamily, membrane)
           (gluP) [Acinetobacter sp. ADP1]
          Length = 222

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 64/112 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EIVR+G+ A P+GQ+EAA +L +T  +  R V+LP ++  I P L SQ + ++  
Sbjct: 102 GAYSTEIVRAGIQATPKGQIEAAASLAMTRFQILRHVVLPPSLGRIWPALCSQIIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           SS+   +   +L  V   I ++  +  EI ++   +YL L+I+I   + R+ 
Sbjct: 162 SSVCSQISMEELTFVANFIQSRNFRGFEIYIVIAVLYLILAIVIRALLMRIG 213


>gi|238019790|ref|ZP_04600216.1| hypothetical protein VEIDISOL_01665 [Veillonella dispar ATCC 17748]
 gi|237863314|gb|EEP64604.1| hypothetical protein VEIDISOL_01665 [Veillonella dispar ATCC 17748]
          Length = 229

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 54/87 (62%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + +Y   + + AA+ AEI+RS + AV  G+ EAA +LG+T  ++   ++LPQA    
Sbjct: 86  PGLVFVYAVFTLHIAAYSAEIMRSSIDAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMS 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           IPPLT+  + +LK ++L   VG  D++
Sbjct: 146 IPPLTNLVIGMLKGTALIFNVGVVDMM 172


>gi|306828837|ref|ZP_07462029.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304429015|gb|EFM32103.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 240

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 9/169 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + + VL  + +LF   L + +  +  ++  L+Y++   I   P ++LI   Y L    
Sbjct: 23  IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLF--P 77

Query: 249 PVLGQF-NFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +L QF   IG      +   LY A   Y   T   ++EI+RS ++ V +GQ+EAA A+G
Sbjct: 78  SLLNQFLKSIGSDLDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAIG 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++ 
Sbjct: 138 LTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIA 186


>gi|294676182|ref|YP_003576797.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294475002|gb|ADE84390.1| amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 236

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 70/133 (52%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+   P F +  IAL+   AAF AE++R    +VP GQ+ A +A+G+T R+    + LPQ
Sbjct: 96  GAVDFPPFAAGVIALALVFAAFAAEVLRGAFQSVPEGQVLAGLAIGMTGRQVFWRIKLPQ 155

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             R  +P + + +LNLLK+++L   +   DL+      +  T Q     L    IY +L 
Sbjct: 156 LWRFALPGMGNLWLNLLKDTALVSVIALDDLMRATKVAVGVTKQPFTFYLAACLIYWALC 215

Query: 379 IMIALFMNRLNAK 391
           +   L + RL A+
Sbjct: 216 LGSELVLARLEAR 228


>gi|172063792|ref|YP_001811443.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171996309|gb|ACB67227.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 219

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S  LG+V+ L    + R    +    L   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMALGLVVGLVVA-IMRIGSNRLASGLAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P LG        T+ P    ++  L+    A+++E +R  ++ + RGQ  AA +LGLTH
Sbjct: 77  LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    +Y  LS ++     R+  +++L
Sbjct: 189 LAAAALYWVLSTLLTRLQGRVETRLSL 215


>gi|257866711|ref|ZP_05646364.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872772|ref|ZP_05652425.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257800669|gb|EEV29697.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806936|gb|EEV35758.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 214

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 89/176 (50%), Gaps = 25/176 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ +GLP L ++       FD+                 F +  IA    
Sbjct: 60  RGTPLLLQLIFVFYGLPILGIV-------FDR-----------------FEAALIAFIIN 95

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+  EI R G+ ++P GQ EAA  L L+  +  + +++PQ ++  +P + ++ +NL+K
Sbjct: 96  YAAYFTEIFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVK 155

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL   +G +D++ +G   + +    + ++ + + IYL ++ +  L + ++  K+
Sbjct: 156 DTSLVYILGLSDVMRIGKIAMERDSTLLPLVGVGL-IYLVMTGVFTLLLKQIETKL 210


>gi|255283434|ref|ZP_05347989.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Bryantella formatexigens DSM 14469]
 gi|255266082|gb|EET59287.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Bryantella formatexigens DSM 14469]
          Length = 267

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 236 VLIALKYQLHFDKPVLGQFNFI--GGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGL 289
           V+++   +L    P++ Q  FI  G  ++    MS++ A    +S  T A++AE VR G+
Sbjct: 74  VILSAYVELFRGTPMMVQAMFIYYGSQSLFKINMSMWFAAYFIVSINTGAYMAETVRGGI 133

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++  GQ E A A+G+TH +    V+LPQA+R+I+P + +  +  +K++ +   +G  +L
Sbjct: 134 LSIDPGQTEGAKAIGMTHFQTMTSVILPQALRNIMPQIGNNLIINIKDTCVLSIIGTVEL 193

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLS 378
                ++        E   I M IY  L+
Sbjct: 194 FFAAKSVAGTFYTYFEAFTIAMVIYFVLT 222


>gi|332040173|gb|EGI76554.1| polar amino acid abc transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 266

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 70/123 (56%), Gaps = 2/123 (1%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L + LS   AA +AE+ R+G++AVPRGQ +AA +LGLT  +    V+  QA+R I+P 
Sbjct: 142 LTLPVGLSA--AAVVAEVYRAGVLAVPRGQTDAARSLGLTDTQVFFHVVFLQALRYIVPA 199

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q + ++K+++    V + +L+     +I      + + L+   +Y  ++  I+    
Sbjct: 200 LVAQLVIVVKDTTFGYIVTYGELLQNAKVLIANYHSLVPVYLVVALLYCLVNYAISWASQ 259

Query: 387 RLN 389
           RL 
Sbjct: 260 RLG 262


>gi|296102999|ref|YP_003613145.1| allantoate transport membrane protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057458|gb|ADF62196.1| allantoate transport membrane protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 221

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 60/108 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EIVR+G+   P+GQ EA   LGLT  +    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIVRAGIQVTPKGQWEAGRVLGLTRTQTFIRVVLPPALQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           SS+   V + +L      I ++T  + E+ L+   IYL+LSI +   M
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTGIYLALSITLRQLM 209


>gi|260222555|emb|CBA32233.1| hypothetical protein Csp_D31110 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 227

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 7/161 (4%)

Query: 243 QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +L  + P + Q  FI       G  +S E  S +IA+     A+  EI+R+GL A P+GQ
Sbjct: 68  ELIRNTPFIVQLFFIFFGLPAAGFKLSAETAS-FIAMVINLGAYATEIIRAGLEATPKGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA++L L   +    V+LP A++ I P L SQ + ++  SS+   +   +L      I
Sbjct: 127 IEAAVSLALNRLQTFTYVVLPPALKKIWPSLISQVVIVMLGSSVCGQISTKELSYAADLI 186

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   ++ E  ++   +YL LS ++   +N L A      +
Sbjct: 187 QSNNFRSFEAFMVVGAVYLLLSFVVRHVLNWLGATFVFGRR 227


>gi|239931078|ref|ZP_04688031.1| amino acid ABC transporter transmembrane protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291439448|ref|ZP_06578838.1| amino acid ABC transporter integral membrane protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291342343|gb|EFE69299.1| amino acid ABC transporter integral membrane protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 216

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 30/206 (14%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFVLG+V +L     +R      G      +  PLL    FL + LP       ++ + F
Sbjct: 33  SFVLGLVWALLMRVPTRWVTWPVGAVTEFVRNTPLLVQLFFLFYVLP-------EWGITF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                G F                 A+  + + +  ++ R+G+ AVP GQ EAA AL L 
Sbjct: 86  SALTTGVF-----------------AIGLHYSTYTMQVYRAGIEAVPVGQWEAATALNLP 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+   +V+LPQA+R ++P L +  +++LK++ L +A+   +++        Q  Q  E 
Sbjct: 129 PRRTWTVVILPQAVRRVVPALGNYVISMLKDTPLLMAITVLEMLGEARLFSQQNFQFTEP 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +    ++ +S + +L +  L  ++
Sbjct: 189 LTVIGVAFIVISYLASLALRALERRL 214


>gi|306831849|ref|ZP_07465005.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426047|gb|EFM29163.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 215

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL  V  GQ EA +A G+T+ +    ++ PQA R ++P + SQ+
Sbjct: 86  AFTVFTSAALAEIIRGGLNGVDDGQTEAGLAQGMTNFQIFIYIIFPQAFRKMLPAIISQF 145

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 146 VTVIKDTSLLYSV 158



 Score = 43.9 bits (102), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +++F  ++ +T+IGT++   R   N +  WI  +Y+E  RN+P L+ IF +
Sbjct: 12  ILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPIFRWISSIYIEFVRNVPNLLWIFII 71

Query: 149 Y 149
           +
Sbjct: 72  F 72


>gi|326204707|ref|ZP_08194562.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
 gi|325985078|gb|EGD45919.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
          Length = 210

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 53/89 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA     AA+ AEI R G+ ++P+GQ EA   LG T  +    ++LPQ ++ ++
Sbjct: 80  RFTAAVIAFVLNYAAYFAEIFRGGIESIPKGQYEAGEVLGFTKLQVFFKIVLPQVIKRVL 139

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           PP++++ + L+K+++L  A+   ++  V 
Sbjct: 140 PPISNEVITLVKDTALVSAIAVEEMFRVA 168


>gi|242240517|ref|YP_002988698.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132574|gb|ACS86876.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 245

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 65/121 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL     A+++E  R+G+ +VP+GQ+EAA  LG+  R+    V+LPQA R++ P
Sbjct: 88  FTAGVLALGINVGAYLSETFRAGIQSVPKGQLEAAWILGMPRRQMFLHVVLPQAARAVWP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +  + LL  +SL  A+   +L      I  +T   I+   +   IYL LS + +   
Sbjct: 148 AIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALIYLLLSNLFSWLG 207

Query: 386 N 386
           N
Sbjct: 208 N 208


>gi|218678152|ref|ZP_03526049.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           894]
          Length = 163

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 2/102 (1%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T+   G P LV + L Y      P++ Q +F+      P F   +IA +  +AA   E++
Sbjct: 57  TYAFRGTPLLVQLFLIYYGIGQLPLVRQ-SFLWAVMREP-FWCAFIAFTLNSAAHTTEVL 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           R G+ AVPRGQ+EAA ALGL+     RL++ P  +RS+ PP+
Sbjct: 115 RGGIQAVPRGQIEAAKALGLSRFHTARLIVFPLTLRSLFPPM 156


>gi|170703222|ref|ZP_02894026.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|172060112|ref|YP_001807764.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|170131872|gb|EDT00396.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171992629|gb|ACB63548.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 229

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 12/234 (5%)

Query: 169 MFLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           MFL   G   P L   T    ++ V S    + L L    +++  H +  +A+   Y  T
Sbjct: 1   MFLYGFG---PVLWAGTVQTIELSVLSLAAAVALGLIGA-VAKLSHNRVLRAIATGY--T 54

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEI 284
            LI  +P LVL+ L +  +  +  L QF + +G   +  + F++  + L     A+  E 
Sbjct: 55  TLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWEQIDIDPFVAGVLTLGFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   ++VPRGQ+EA  A G++  +    ++ PQ MR  +P + + +  L+K ++L   +
Sbjct: 113 FRGAFLSVPRGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSII 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G AD+V         T      ILI   IYL+++ +  L + +L  + ++  + 
Sbjct: 173 GLADVVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIQLEKRYSMGVRH 226


>gi|163740071|ref|ZP_02147475.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
 gi|161386702|gb|EDQ11067.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
          Length = 224

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 16/177 (9%)

Query: 219 LPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           L +L+IS F   G P LV L    Y L     VL Q N +  +          + L+ + 
Sbjct: 55  LVVLFISFFR--GTPLLVQLFLFYYGLPQVLSVLTQINGVSAAI---------MGLTLHF 103

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AE +R+ ++ V R Q EAA ++G+T  +  R ++LPQA R   P L + +++++K 
Sbjct: 104 AAYMAESIRAAILGVDRSQWEAAQSIGMTRGQMMRRIVLPQAARIAAPTLVNYFIDMIKG 163

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +G  ++  +G T     G  +  E  L+   IY  L   ++L   RL   +
Sbjct: 164 TSLAFTLGVTEM--MGATQKEAAGSFLYFEAFLVVAVIYWILVEALSLVQRRLETHL 218


>gi|168817911|ref|ZP_02829911.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205344900|gb|EDZ31664.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320086788|emb|CBY96560.1| Nopaline transport system permease protein nocQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
          Length = 228

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L     V+     I    + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G THR+  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTHRQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178


>gi|329296934|ref|ZP_08254270.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 218

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V+P + +  +AL+ YT+AF+ +I    + A+P+GQ EA+  LGL   +    V+ PQ
Sbjct: 80  GIDVAP-WTAASLALTLYTSAFLLDIWYGSIRALPKGQWEASRCLGLNFGQTLYRVVAPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AIRIAIAPTVGFAVQVIKGTALASIIGFVELTKAGTILNNVTYQPFKV 186


>gi|291616415|ref|YP_003519157.1| YhdY [Pantoea ananatis LMG 20103]
 gi|291151445|gb|ADD76029.1| YhdY [Pantoea ananatis LMG 20103]
 gi|327392855|dbj|BAK10277.1| amino acid ABC transporter permease protein YhdY [Pantoea ananatis
           AJ13355]
          Length = 225

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  V+P + +  +AL+ YT+AF+ +I    + A+P+GQ EA+  LGL   +    V+ PQ
Sbjct: 87  GIDVAP-WTAASLALTFYTSAFLLDIWHGSIQALPKGQWEASRCLGLDFGQTLTRVIAPQ 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 146 AIRIAIAPTVGFAVQVIKGTALASIIGFVELTKAGTILNNVTYQPFKV 193


>gi|229589728|ref|YP_002871847.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229361594|emb|CAY48471.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 261

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 4/141 (2%)

Query: 257 IGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           +G + +S P+++ + I L+   +A +AEI R  + ++P  Q EAA +L  T  +  R ++
Sbjct: 119 VGSAYISFPDWVKVTIGLALPASANVAEIFRGAIASIPSTQWEAARSLAFTRGQIFRSII 178

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMF 372
           LPQ  + ++PP  + Y  +   ++LA  VG  D++    +    +N TG  + I L  + 
Sbjct: 179 LPQCFKRMLPPWMNLYAVITMGTALASLVGVHDVIDTAQIASNTVNMTGFTVVIYLSLLV 238

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
           ++ +    I+    RL  + A
Sbjct: 239 LFFAYCYPISRLTQRLERRYA 259


>gi|224368514|ref|YP_002602677.1| GlnP2 [Desulfobacterium autotrophicum HRM2]
 gi|223691230|gb|ACN14513.1| GlnP2 [Desulfobacterium autotrophicum HRM2]
          Length = 223

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 52/81 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   T+ + AE  R  + ++  GQM AA A+GL   KA R ++LPQA+R +IP  +++
Sbjct: 93  LALGINTSVYQAEYFRGAIKSIKPGQMTAARAMGLGKWKAIRYIILPQALRLVIPSSSNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + + K +S+A AVG  +L+S
Sbjct: 153 IIYMFKYTSVAFAVGVPELLS 173



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 84  SYATAILVGFVNTFW----LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           +YA  IL   ++  W    L+F  +    I G ++G  R+ ++K + WI   YVE  R  
Sbjct: 6   NYAIEILPDMLSGAWVTIELSFVCITVGIIFGLILGVARVYSSKFIYWIVTAYVEFLRGT 65

Query: 140 PPLVVIFFLY 149
           P L+ +FF+Y
Sbjct: 66  PCLLQLFFIY 75


>gi|70729651|ref|YP_259390.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68343950|gb|AAY91556.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 218

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 169 MFLNNRGLSFPTL------TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           MFL N     P L      T+      FV S ++G+V +L      R        ++ L 
Sbjct: 1   MFLQNALDFLPILLKGAVVTLQVTVGSFVLSSLIGLVFALMMVSKVR--------SVALF 52

Query: 223 YISTF-LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            I    +I GLP +V +   + ++F  P  G    I  + +    + L IA S Y A   
Sbjct: 53  AIGVVNVIRGLPIIVQL---FYIYFVLPDFG----IQLTAMQAGVIGLGIAYSAYQA--- 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R+G+ A+ +GQ+EAA ++G+      R V+LPQA+R  +PP  +  + +LK+SSL 
Sbjct: 103 -ENFRAGIQAIHQGQIEAAESIGMRGPMIMRRVVLPQALRIALPPYGNTLVMMLKDSSLV 161

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +  A++   G  I + T + + +  +   +YL+LS+ ++  + RL A+I+ + K
Sbjct: 162 STITVAEMTRAGQLIASSTFENMTVYTLVALLYLALSLPLSFALRRLEARISTRRK 217


>gi|170735092|ref|YP_001774206.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169821130|gb|ACA95711.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 240

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261
           +LSR+   +T + L  LY + F   G+P L++I   Y  +F    L    GQ+    G  
Sbjct: 47  KLSRY---RTLRLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGAEGFI 98

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G+      R +L+PQ +R
Sbjct: 99  GVPPFVVGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRSMVLRRILVPQVLR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +   LK+S+L    G A+L+       N T Q     +    +YL ++ + 
Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTGLS 218

Query: 382 ALFMNRLNAKIALKEKK 398
               NR  A +    ++
Sbjct: 219 NRVFNRAEAIVGRSFRR 235


>gi|271968859|ref|YP_003343055.1| amino acid ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270512034|gb|ACZ90312.1| ABC-type amino acid transport system permease component-like
           protein [Streptosporangium roseum DSM 43021]
          Length = 367

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 77/140 (55%), Gaps = 19/140 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHF-----DKPVLGQFNFIGGSTVSPEFMSLYI 271
           +AL + YI  F   G+P++VLI   Y + F     + P+L + + I         +   +
Sbjct: 195 RALCIAYIDVFR--GIPSVVLI---YLVCFGLPLTEVPILSEGDPI---------LYAVV 240

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A+ AE+ R+G+ ++ + Q  AA+++GL+     R V+LPQ  R+I  P+ S +
Sbjct: 241 ALSLTYSAYNAELYRAGIESINKSQTSAALSMGLSQPDVLRFVILPQMSRNIAAPMLSTF 300

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + L K+++L + VG  D  S
Sbjct: 301 IGLQKDTALVIVVGIIDAFS 320


>gi|218677478|ref|ZP_03525375.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 894]
          Length = 188

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 12/142 (8%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG------------ 75
           ++Q+ +  L+ V+       V   + +  +     FL+  AGF+I +G            
Sbjct: 31  AIQLGIVALVVVLLGMLAYAVKAGLAEKGIRFSFSFLANTAGFDISEGWTLTSGEGFVPN 90

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +  ++S+ S A+A + G  NT  +A   +I +TI+GT++G GRLS N +V  +C   VE 
Sbjct: 91  LTQFSSEMSIASAFVTGIFNTAKIALLAIILSTILGTMLGVGRLSTNWVVRNLCFWIVEF 150

Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157
            RN P L+ + F Y +V+   P
Sbjct: 151 VRNTPLLIQLVFWYFAVVLHFP 172


>gi|115358998|ref|YP_776136.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115284286|gb|ABI89802.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 219

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S  LG+V+ L    + R    +    L   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMALGLVVGLVVA-IMRIGSNRLASGLAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P LG        T+ P    ++  L+    A+++E +R  ++ + RGQ  AA +LGLTH
Sbjct: 77  LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    +Y  LS ++     R+  +++L
Sbjct: 189 LAAAALYWVLSTLLTRLQGRVETRLSL 215


>gi|89214059|gb|ABD64371.1| amino acid ABC transporter permease protein 1 [Pseudomonas
           chlororaphis]
          Length = 222

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 69/122 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +  +A+     A+  EI+R+G+ A+PRGQ+EAA AL +T  +A R V+L  A+  + 
Sbjct: 89  EWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQLEAAAALAMTRLEAFRHVVLLPALGKVW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L+SQ + ++  S++   +   +L      I ++  +A E   +   IYL ++++I   
Sbjct: 149 PALSSQIIIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYALTTLIYLCMALLIRQL 208

Query: 385 MN 386
           +N
Sbjct: 209 LN 210


>gi|72160708|ref|YP_288365.1| amino acid ABC transporter inner membrane subunit [Thermobifida
           fusca YX]
 gi|71914440|gb|AAZ54342.1| amino acid ABC transporter, inner membrane subunit [Thermobifida
           fusca YX]
          Length = 240

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 17/174 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +F L +V+ +  T           +A+   Y  TF   G+  LVL+   Y + F  P 
Sbjct: 27  VLAFALAMVVGVMGT-----LRNPVARAIATGYTETF--RGVAALVLM---YWMAFAIPQ 76

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  +             +  +AL     A+ AE+VR+ + AVP+ Q+EA IAL ++  + 
Sbjct: 77  LVPYKI-------DALFAAVLALGLNVGAYGAEVVRAAINAVPKAQVEATIALSMSWWRR 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            R V+LPQA   ++P   +  + L+K +++   +G +DL  V       TG+ +
Sbjct: 130 MRAVVLPQAWAQMLPTFGNLVIELMKATAIVSLIGVSDLTRVAQEQRASTGETV 183


>gi|323526380|ref|YP_004228533.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383382|gb|ADX55473.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 229

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE  R   +AVPRGQ+EA  A G+   +  R +L PQ MR  +P + + +  L+K 
Sbjct: 106 GAYFAETFRGAFLAVPRGQLEAGAAYGMNGARIFRRILFPQMMRFALPGIGNNWQVLIKA 165

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++L   +G AD+V         T +    ++    IYL+++ +  + ++ L  + +   +
Sbjct: 166 TALVSIIGLADVVKAAQDAGRSTFKMFLFVMCAALIYLAMTTVSNIVLSGLEKRFSTGTR 225

Query: 398 K 398
           +
Sbjct: 226 Q 226


>gi|307727657|ref|YP_003910870.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588182|gb|ADN61579.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 240

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 7/179 (3%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T +  G+P L++I   Y  +F    L    GQ+    G    P F+   +A+   + A
Sbjct: 60  IYTTVFRGVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGA 116

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AE+ RS ++AV RG++EAA ++G+      R +L+PQ +R  +P + + +   LK+S+
Sbjct: 117 YQAEVYRSAVLAVSRGELEAARSIGMPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSA 176

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L    G A+L+         T Q     ++   +YL ++ +     N   A++    K+
Sbjct: 177 LISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLLMTSISNRVFNHAEARVGRSFKR 235


>gi|157370638|ref|YP_001478627.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322402|gb|ABV41499.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 230

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 8/137 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A+     A+  E  R   + V RGQ+EAA+A G+   +  R VLLPQ +   IP
Sbjct: 93  FISGVLAIGFVFGAYYTETFRGAFLTVERGQLEAAMAYGMRPGQVFRRVLLPQMLSFAIP 152

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF----IYLSLSIMI 381
            + + +L L+K S+L   +G  D+V     +  Q G+A +   ++ F    IY++++ + 
Sbjct: 153 GINNNWLGLMKASALVSILGLEDMV----WLAEQAGRATQKPFLFYFLVALIYMAITAVS 208

Query: 382 ALFMNRLNAKIALKEKK 398
           +   +RL  + AL    
Sbjct: 209 SWGFSRLARRYALASSH 225


>gi|115351108|ref|YP_772947.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115281096|gb|ABI86613.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 253

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 7/209 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ L +  +  
Sbjct: 43  ELSVLSLAAAVALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSI 97

Query: 248 KPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  L QF + +G   +  + F++  + L     A+  E  R   ++VPRGQ+EA  A G+
Sbjct: 98  QIWLNQFTDLVGWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGM 157

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         T     
Sbjct: 158 SGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 217

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            ILI   IYL+++ +  L + +L  + ++
Sbjct: 218 FILIAALIYLAITTVSNLVLIQLEKRYSM 246


>gi|221198892|ref|ZP_03571937.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2M]
 gi|221205152|ref|ZP_03578168.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221174943|gb|EEE07374.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221181343|gb|EEE13745.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2M]
          Length = 240

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261
           +LSR+   ++ + L  LY + F   G+P L++I   Y  +F    L    GQ+    G  
Sbjct: 47  KLSRY---RSARLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGAEGFI 98

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G+      R +L+PQ +R
Sbjct: 99  GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRSMVLRRILVPQVLR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +   LK+S+L    G A+L+       N T Q     +    +YL ++ + 
Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTGLS 218

Query: 382 ALFMNRLNAKIALKEKK 398
               NR  A +    ++
Sbjct: 219 NRVFNRAEAIVGRSFRR 235


>gi|119945247|ref|YP_942927.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119863851|gb|ABM03328.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 223

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 16/209 (7%)

Query: 177 SFPTLTMD--TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           +FP L     T   + V S +LGIV+++    L +    K    +  ++I T     LP 
Sbjct: 14  AFPQLLSGAFTTIHVSVLSMLLGIVIAVLLA-LGKMSDSKVFYNMANIWIET--ARNLPA 70

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L LI   Y  +F    LG +    G  +SP F S++ AL    A ++AE  R G  ++P 
Sbjct: 71  LFLI---YMAYFG---LGAY----GIHLSPYF-SVFSALVFINAGYLAETFRGGFQSIPT 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q  AA +LG+   K  R V+LPQ  R I  P+T+Q++  +  SSL + VG  +L     
Sbjct: 120 TQYSAAKSLGMNSLKVYRHVILPQMFRRIYHPMTNQFVWSILMSSLGILVGMNELSGETQ 179

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            + + + + +E  ++   +Y  ++ ++ L
Sbjct: 180 RLQSTSFRTLEFFIVAAAMYFVITKLVLL 208


>gi|325524870|gb|EGD02817.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 229

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 6/189 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269
           H +  +A+   Y  T LI  +P LVL+ L +  +  +  L QF + +G   +  + F++ 
Sbjct: 42  HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWDQIDIDPFVAG 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L     A+  E  R   ++VPRGQ+EA  A G++  +    ++ PQ MR  +P + +
Sbjct: 98  VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFVRIMFPQMMRFALPGIGN 157

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  L+K ++L   +G AD+V         T      IL+   IYL+++ +  L + +L 
Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217

Query: 390 AKIALKEKK 398
            + ++  + 
Sbjct: 218 KRYSMGVRH 226


>gi|258646475|ref|ZP_05733944.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403883|gb|EEW97430.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 232

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L+ + A  I+EI+R   ++V RGQ EAAI  GL+  +    ++ PQA+   IP L S+
Sbjct: 101 VSLTFHYAPVISEILRPAYLSVDRGQHEAAIVFGLSPVRRVFSIIAPQALPIAIPGLVSE 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQ 362
            +N+LK++S+   +G  DL+     IIN   GQ
Sbjct: 161 SINILKDTSIMFFIGVIDLMGRANLIINAAFGQ 193


>gi|227549083|ref|ZP_03979132.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078865|gb|EEI16828.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 228

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 72/122 (59%), Gaps = 1/122 (0%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+ F+AE +RSG+  V  GQ EAA +LGL   +   L++LPQA+R+ I PL +  + L 
Sbjct: 107 YTSCFVAESLRSGINTVHVGQSEAARSLGLGFGQIFSLIILPQALRAAIIPLGNTLIALT 166

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL-IWMFIYLSLSIMIALFMNRLNAKIAL 394
           KN+++A  +G A+   +  + I      + +I  ++   ++ L++ + L +  L+ ++A+
Sbjct: 167 KNTTIASVIGVAEASLLMKSTIEMHANELFVIFGVFALGFIILTLPMGLALGWLSERLAV 226

Query: 395 KE 396
           K 
Sbjct: 227 KR 228


>gi|222081929|ref|YP_002541294.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726608|gb|ACM29697.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 227

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 68/119 (57%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  EIVR+GL ++ + Q+EAA  LGL+ R+    V++  A+  + P LTSQY+ L+  SS
Sbjct: 104 YTCEIVRAGLQSIHKAQLEAAECLGLSRRQTYWHVIIRPAIERVYPALTSQYVLLMLASS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +   +L +V   I + T ++ E  ++   +YL LS ++ + +  L   + ++ +K
Sbjct: 164 ITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYLLLSFVVRIALWLLGLGLFVRRRK 222


>gi|150375848|ref|YP_001312444.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Sinorhizobium
           medicae WSM419]
 gi|150030395|gb|ABR62511.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Sinorhizobium medicae WSM419]
          Length = 239

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T++P   +  +AL     A+ AE+VR  + A+ R Q EA IAL LT  +A R ++LPQ
Sbjct: 98  GITLTP-LQAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIALNLTRFQAMRHIILPQ 156

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+  ++P   +  + LLK +++   +   D+      +  QTG  +      + +Y +++
Sbjct: 157 ALPLMLPTFGNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGSTLIPFATILLLYFAMA 216

Query: 379 IMIALFMNRLNAKIA 393
            +I++ M  L  +++
Sbjct: 217 WLISMGMRWLERRVS 231


>gi|94676741|ref|YP_588663.1| amino acid ABC transporter, permease protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219891|gb|ABF14050.1| amino acid ABC transporter, permease protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 218

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 36/209 (17%)

Query: 193 SFVLGIVLSLFAT----------RLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALK 241
           SF +G++L L  T          +L  +F+    +  PLL +  FLIF GLP+       
Sbjct: 30  SFFIGLILGLLVTLIRLYSSRYLQLIANFYVWVIRGTPLL-VQLFLIFYGLPS------- 81

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                            G T+   F +  I  +    A+ +EI+R  +++VP  Q EAA 
Sbjct: 82  ----------------AGITLD-AFPAALIGFTLNIGAYSSEIIRGAILSVPLTQWEAAW 124

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+G+   +A   V+LPQA+   +PPL + +++L+K++SLA  +   ++      I++ T 
Sbjct: 125 AIGMNSTQAMIRVILPQAIFVALPPLANSFISLIKDTSLAAVITVPEIFLAAQRIVSVTY 184

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + + + +    IYL  S ++  +  +L +
Sbjct: 185 EPLILYIEAAAIYLLYSTVLGKWQTKLES 213


>gi|332160646|ref|YP_004297223.1| ABC-type amino acid transport system, permease component [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318604516|emb|CBY26014.1| putative amino acid ABC transporter, permease protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664876|gb|ADZ41520.1| ABC-type amino acid transport system, permease component [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330862544|emb|CBX72699.1| hypothetical protein YEW_JG40470 [Yersinia enterocolitica W22703]
          Length = 217

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL+  +    V+ PQ
Sbjct: 79  GIDVSP-WAAAAMALTLFTSAFLVDIWCGSIDALPKGQWEASRCLGLSFSQTLFRVIAPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 138 ATRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 185


>gi|313899533|ref|ZP_07833042.1| ABC transporter, permease protein [Clostridium sp. HGF2]
 gi|312955640|gb|EFR37299.1| ABC transporter, permease protein [Clostridium sp. HGF2]
          Length = 260

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 14/128 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+  F   G P +V   + Y  H  +PVL       G T+          +S  T A++
Sbjct: 81  LYVWIFR--GTPMMVQALIIY--HGLRPVLNWSPVTAGITI----------ISINTGAYM 126

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R+G+ ++ +GQ EAA +LG+T  +    ++LPQA+R+  P + ++++  +K+SS+ 
Sbjct: 127 AEIIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIGNEFIVNIKDSSML 186

Query: 342 VAVGFADL 349
             +G  +L
Sbjct: 187 NVIGVIEL 194


>gi|114764422|ref|ZP_01443648.1| putative transport system permease abc transporter protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114543176|gb|EAU46194.1| putative transport system permease abc transporter protein
           [Roseovarius sp. HTCC2601]
          Length = 276

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 10/201 (4%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYIST---FLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V++ FA  L     + TG A PL +++T    +I G P L+ + L Y  +    +  QF 
Sbjct: 75  VIAGFALALPLGAVQVTGPA-PLRWLATGFCTVIRGTPLLLQLWLIY--YGLGALFAQFP 131

Query: 256 FIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            I GS + P     +    + L+   AA+  EI+R     VPRG++EAA A G+      
Sbjct: 132 EIRGSWLWPYLRQAWPYGFLTLTLSFAAYQGEIMRGAFAGVPRGELEAARAFGMPRLMVF 191

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V  P+A+   +P L  + +  LK + L   +   DL +V   +   T    E +L+ +
Sbjct: 192 RRVWFPRAVHRALPTLAGEIILQLKATPLVATITVTDLYAVITRVRQDTYLTYEPLLLLI 251

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            IYL LS  + + +  L  ++
Sbjct: 252 AIYLCLSGTLTIVLRWLEGRV 272


>gi|152983724|ref|YP_001349488.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150958882|gb|ABR80907.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 221

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 9/143 (6%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L+F    LG F    GS     + +L   ++   A ++AE  R GL AVP  Q+ AA 
Sbjct: 75  YILYFG---LGSFGLHVGS-----WFALLAGITFNNAGYLAETFRGGLQAVPETQLRAAR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQT 360
           +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL V VG   DL  V   +  +T
Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTNDLTGVTQALNVKT 186

Query: 361 GQAIEIILIWMFIYLSLSIMIAL 383
            +  E   +   +Y +++ ++ L
Sbjct: 187 FRTFEYFALAAVLYFAMAKLLVL 209


>gi|49078214|gb|AAT49762.1| PA1258 [synthetic construct]
          Length = 222

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 19/149 (12%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L+F    LG F    G  VS  F +L   ++   A ++AE  R GL AVP  Q+ AA 
Sbjct: 75  YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL V VG  D         + TG
Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD---------DLTG 177

Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRL 388
             QA+ +     F Y +L+ ++   M +L
Sbjct: 178 VTQALNVKTFRTFEYFALAAVLYFAMAKL 206


>gi|221195858|ref|ZP_03568911.1| permease protein of ABC transporter system [Atopobium rimae ATCC
           49626]
 gi|221184332|gb|EEE16726.1| permease protein of ABC transporter system [Atopobium rimae ATCC
           49626]
          Length = 217

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 68/121 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    +++AE +RSG  +V R Q E+A  LGL+ +++   V+LPQA+   +P L + 
Sbjct: 91  VGLTFLGGSYMAEALRSGFDSVERIQEESAWVLGLSQKQSLWYVVLPQALSVSLPSLVAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K SS+  A+  ADL+ V   +I       E + + +  Y+ + + ++L  +RL  
Sbjct: 151 TIFLIKESSVVSAIALADLMFVAKDLIGMMYNTTEALFMLVVAYILILVPVSLMGSRLER 210

Query: 391 K 391
           +
Sbjct: 211 R 211


>gi|296454582|ref|YP_003661725.1| polar amino acid ABC transporter inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296184013|gb|ADH00895.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
          Length = 569

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 59/89 (66%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  ++   + +PQA+ +
Sbjct: 344 SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQSLMEIEVPQAVYA 403

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           ++P   +Q + +LK+++L   + + DL+ 
Sbjct: 404 MLPAAVTQLVVVLKDTALGSIIMYTDLLQ 432


>gi|188534297|ref|YP_001908094.1| arginine transporter permease subunit ArtQ [Erwinia tasmaniensis
           Et1/99]
 gi|188029339|emb|CAO97216.1| Arginine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 238

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 97/186 (52%), Gaps = 12/186 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIA 272
           +ALP + +  F+ FG   L+L ++  + L+      PV  Q N I    VSP F+   IA
Sbjct: 55  RALPEILVVLFIYFGASQLLLTLSDGFTLNLALVQIPV--QVN-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   +++ ++ +R  L AVP+GQ E+  ALG+        +++PQ  R  +P L +Q+L
Sbjct: 111 LAILYSSYASQTLRGALKAVPQGQWESGQALGMKKSAIFVRLIVPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   D++    +I  +T +       W  +  ++ ++I LF  ++  +I
Sbjct: 171 VLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYVVAAAIYLLITLFSQQVLKRI 226

Query: 393 ALKEKK 398
            L+  +
Sbjct: 227 ELRTTR 232


>gi|170732503|ref|YP_001764450.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169815745|gb|ACA90328.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 229

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269
           H +  +A+   Y  T LI  +P LVL+ L +  +  +  L QF + +G + +  + F++ 
Sbjct: 42  HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWNQIDIDPFVAG 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L     A+  E  R   ++VPRGQ+EA  A G++  +    ++ PQ MR  +P + +
Sbjct: 98  VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMSGARVFARIMFPQMMRFALPGIGN 157

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  L+K ++L   +G AD+V         T      IL+   IYL+++ +  L + +L 
Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217

Query: 390 AKIALKEKK 398
            + ++  + 
Sbjct: 218 KRYSMGVRH 226


>gi|15596455|ref|NP_249949.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107100707|ref|ZP_01364625.1| hypothetical protein PaerPA_01001734 [Pseudomonas aeruginosa PACS2]
 gi|116049210|ref|YP_791987.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254234385|ref|ZP_04927708.1| hypothetical protein PACG_00228 [Pseudomonas aeruginosa C3719]
 gi|9947190|gb|AAG04647.1|AE004555_7 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115584431|gb|ABJ10446.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166316|gb|EAZ51827.1| hypothetical protein PACG_00228 [Pseudomonas aeruginosa C3719]
          Length = 221

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 19/149 (12%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L+F    LG F    G  VS  F +L   ++   A ++AE  R GL AVP  Q+ AA 
Sbjct: 75  YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL V VG  D         + TG
Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD---------DLTG 177

Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRL 388
             QA+ +     F Y +L+ ++   M +L
Sbjct: 178 VTQALNVKTFRTFEYFALAAVLYFAMAKL 206


>gi|325686265|gb|EGD28307.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 224

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F I  +PT+VL+   Y +++  P     N+       P      +A S + AA  
Sbjct: 60  IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++IVR  + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL 
Sbjct: 108 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           + +   ++++VG  II    Q     + W++
Sbjct: 168 LVISIMEVINVGQQIIEANNQQNPTGVFWVY 198



 Score = 41.6 bits (96), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +  GI      S++A  ++ G   + W+A   +I    IGT+ G  R   NK++ +  R+
Sbjct: 2   VHSGINVLFEGSNFAR-LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFALRI 60

Query: 132 YVEVFRNIPPLVVIFFLY 149
           Y+E FR +P +V+++ +Y
Sbjct: 61  YLEFFRIVPTIVLLYLVY 78


>gi|288905751|ref|YP_003430973.1| amino acid ABC transporter, integral membrane protein
           [Streptococcus gallolyticus UCN34]
 gi|325978784|ref|YP_004288500.1| putative amino acid ABC transporter integral membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|288732477|emb|CBI14049.1| Putative amino acid ABC transporter, integral membrane protein
           [Streptococcus gallolyticus UCN34]
 gi|325178712|emb|CBZ48756.1| putative amino acid ABC transporter integral membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 215

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL  V  GQ EA +A G+T+ +    ++ PQA R ++P + SQ+
Sbjct: 86  AFTVFTSAALAEIIRGGLNGVDDGQTEAGLAQGMTNFQIFIYIIFPQAFRKMLPAIISQF 145

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 146 VTVIKDTSLLYSV 158



 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +++F  ++ +T+IGT++   R   N ++ WI  +Y+E  RN+P L+ IF +
Sbjct: 12  ILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPILRWISSIYIEFVRNVPNLLWIFII 71

Query: 149 Y 149
           +
Sbjct: 72  F 72


>gi|323529852|ref|YP_004232004.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386854|gb|ADX58944.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 240

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 7/179 (3%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           I T +  G+P L++I   Y  +F    L    GQ+    G    P F+   +A+   + A
Sbjct: 60  IYTTVFRGVPELLVI---YLFYFGGSTLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGA 116

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AE+ RS ++AV RG++EAA ++G+      R +L+PQ +R  +P + + +   LK+S+
Sbjct: 117 YQAEVYRSAVLAVSRGELEAARSIGMPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSA 176

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L    G A+L+         T Q     ++   +YL ++ +     N   A++    K+
Sbjct: 177 LISVTGLAELLRTSQVAAGSTHQYFTFFVVGGALYLLMTSISNRVFNHAEARVGRSFKR 235


>gi|307255256|ref|ZP_07537071.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259691|ref|ZP_07541414.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861805|gb|EFM93784.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866231|gb|EFM98096.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 223

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 68/127 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLKIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + + RL  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIARLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|306833971|ref|ZP_07467095.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304423972|gb|EFM27114.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 215

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL  V  GQ EA +A G+T+ +    ++ PQA R ++P + SQ+
Sbjct: 86  AFTVFTSAALAEIIRGGLNGVDDGQTEAGLAQGMTNLQIFIYIIFPQAFRKMLPAIISQF 145

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 146 VTVIKDTSLLYSV 158



 Score = 44.7 bits (104), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +++F  ++ +T+IGT++   R   N ++ WI  +Y+E  RN+P L+ IF +
Sbjct: 12  ILQGLWLTIYISFIAIVLSTLIGTVLAVMRNGKNPILRWISSIYIEFVRNVPNLLWIFII 71

Query: 149 Y 149
           +
Sbjct: 72  F 72


>gi|300812424|ref|ZP_07092854.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496591|gb|EFK31683.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 230

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 12/151 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F I  +PT+VL+   Y +++  P     N+       P      +A S + AA  
Sbjct: 66  IYLEFFRI--VPTIVLL---YLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEF 113

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++IVR  + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL 
Sbjct: 114 SDIVRGAIESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLL 173

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           + +   ++++VG  II    Q     + W++
Sbjct: 174 LVISIMEVINVGQQIIEANNQQNPTGVFWVY 204



 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +  GI      S++A  ++ G   + W+A   +I    IGT+ G  R   NK++ +  R+
Sbjct: 8   VHSGINVLFEGSNFAR-LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFALRI 66

Query: 132 YVEVFRNIPPLVVIFFLY 149
           Y+E FR +P +V+++ +Y
Sbjct: 67  YLEFFRIVPTIVLLYLVY 84


>gi|300694624|ref|YP_003750597.1| amino-acid ABC transporter protein [Ralstonia solanacearum PSI07]
 gi|299076661|emb|CBJ35999.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           PSI07]
          Length = 223

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 22/201 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLVLIALKYQL 244
           K+      +GI L + A  L+ +  +     L  L   Y++T  +  +P L+L+ L +  
Sbjct: 20  KVTAIVSAIGIPLGMLAGTLAAYAAQPRSLMLACLARGYVAT--VRNIPYLILVYLSF-- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAI 301
            F  P LG         V    M+  +A+ C   YT  +  EI+R+ L +VPRGQ  AA+
Sbjct: 76  -FGLPKLG---------VPASAMA--VAIGCTALYTGGYFCEILRAALCSVPRGQSSAAL 123

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG++  +  R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T 
Sbjct: 124 SLGMSRWQVQRYIVAPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTF 183

Query: 362 QAIEIILIWMFIYLSLSIMIA 382
              EI+     IY   S+++A
Sbjct: 184 AYTEILAATAAIYWLTSVLLA 204


>gi|218892768|ref|YP_002441637.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|218772996|emb|CAW28808.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 221

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 19/149 (12%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L+F    LG F    G  VS  F +L   ++   A ++AE  R GL AVP  Q+ AA 
Sbjct: 75  YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL V VG  D         + TG
Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD---------DLTG 177

Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRL 388
             QA+ +     F Y +L+ ++   M +L
Sbjct: 178 VTQALNVKTFRTFEYFALAAVLYFAMAKL 206


>gi|220905022|ref|YP_002480334.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869321|gb|ACL49656.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 230

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 11/162 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L Y L           FI     +  F+   + L C + A+ ++I R  + 
Sbjct: 63  GVPILVLLFLCYGL-----------FISLGLPADPFLICCLVLGCTSTAYQSQIFRGAIE 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ+ AA ALG+        ++LPQAMR  IP   +++  LLK+S++   +G  D++
Sbjct: 112 SLPQGQLNAARALGMGEGTGICSIILPQAMRLSIPGWANEFSILLKDSAICYVLGTQDIM 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +    +  +T + + +      IY  L++ +   + RL  ++
Sbjct: 172 ARTSFVAARTHEHLALYAAAGCIYFLLTLAVLKLLRRLEKRV 213


>gi|91225247|ref|ZP_01260415.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269967641|ref|ZP_06181691.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|91189886|gb|EAS76158.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269827728|gb|EEZ82012.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 246

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 92/185 (49%), Gaps = 27/185 (14%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL---------I 238
           ++ V S +L +VL +    L++    K  +A+  LY  T +I G+P LVL         I
Sbjct: 20  EVAVLSLILAMVLGMLGA-LAKLAPYKWARAIATLY--TTVIRGIPDLVLMMLIFFGGQI 76

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIV 285
            L   L+     L ++     S  + E+ S    YI +S + A          A++AE  
Sbjct: 77  LLNNSLYSINETLNEW--FASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETF 134

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +G
Sbjct: 135 RGAIMAVDKGELEAAKAYGMSSALSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIG 194

Query: 346 FADLV 350
             D+V
Sbjct: 195 LDDMV 199


>gi|330816869|ref|YP_004360574.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           gladioli BSR3]
 gi|327369262|gb|AEA60618.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           gladioli BSR3]
          Length = 241

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 7/124 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           G+P L++I   Y  +F    L    GQ+    G    P F    +A+   + A+ AE+ R
Sbjct: 68  GVPELLVI---YLFYFGGSSLVTTIGQWFGADGFVGVPPFAIGAVAVGMISGAYQAEVYR 124

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           + ++AV RG++EAA A+G+    A R +L+PQ +R  +P L + +   LK+S+L    G 
Sbjct: 125 AAVLAVSRGELEAARAIGMPRLTAARRILIPQVLRFALPGLGNVWQLSLKDSALISVTGL 184

Query: 347 ADLV 350
           A+L+
Sbjct: 185 AELL 188



 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
               + + +L+G + T  L  S ++  ++ G LV A +LS  +L+  +   Y  VFR +P
Sbjct: 11  GSEGWGSVLLLGALMTIVLTLSALLIGSVFGGLVAAAKLSRFRLLRVLGDCYTTVFRGVP 70

Query: 141 PLVVIFFLY 149
            L+VI+  Y
Sbjct: 71  ELLVIYLFY 79


>gi|163743506|ref|ZP_02150884.1| amino acid ABC transproter, permease protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383209|gb|EDQ07600.1| amino acid ABC transproter, permease protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 224

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 16/174 (9%)

Query: 219 LPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           L +L+IS F   G P LV L    Y L     VL Q N +  +          + L+ + 
Sbjct: 55  LVVLFISFFR--GTPLLVQLFLFYYGLPQVLSVLTQINGVSAAI---------MGLTLHF 103

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AE +R+ ++ V R Q EAA ++G+T  +  R ++LPQA R   P L + +++++K 
Sbjct: 104 AAYMAESIRAAILGVDRSQWEAAQSIGMTRGQMMRRIVLPQAARIAAPTLVNYFIDMIKG 163

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLN 389
           +SLA  +G  ++  +G T     G  +  E  L+   IY  L   ++L   RL 
Sbjct: 164 TSLAFTLGVTEM--MGATQKEAAGSFLYFEAFLVVAVIYWILVEALSLVQRRLE 215


>gi|148977576|ref|ZP_01814155.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145963227|gb|EDK28494.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 246

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 23/193 (11%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           ++ + S +L +VL +    L++    +  +A+  LY  T +I G+P LVL+ L +   Q+
Sbjct: 20  EVALLSLILAMVLGMLGA-LAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287
             +  +     ++     S +       ++  YI +S + A          A++AE  R 
Sbjct: 77  LLNNSLYSINEWLNEWFTSSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRG 136

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++AV  G+MEAA A G++  KA   +LLPQ +R  +P   + +L LLK ++L   +G  
Sbjct: 137 AIMAVDAGEMEAAKAYGMSPVKAFHRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196

Query: 348 DLVSVGGTIINQT 360
           D+V V       T
Sbjct: 197 DMVRVSALAAGST 209


>gi|254245861|ref|ZP_04939182.1| Amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|124870637|gb|EAY62353.1| Amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
          Length = 253

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ L +  +  
Sbjct: 43  ELSVLSLATAVALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSI 97

Query: 248 KPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  L QF + +G + +  + F++  + L     A+  E  R   ++VPRGQ+EA  A G+
Sbjct: 98  QIWLNQFTDLVGWNQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGM 157

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         T     
Sbjct: 158 SGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 217

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            IL+   IYL+++ +  L + +L  + ++
Sbjct: 218 FILVAALIYLAITTVSNLVLIQLEKRYSM 246


>gi|269960968|ref|ZP_06175337.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269834187|gb|EEZ88277.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 246

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 34/233 (14%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL---------I 238
           ++ V S +L +VL +    L++    K  +A+  LY  T +I G+P LVL         I
Sbjct: 20  EVAVLSLILAVVLGMLGA-LAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFGGQI 76

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIV 285
            L   L+     L ++     S    E+ S    YI +S + A          A++AE  
Sbjct: 77  LLNNSLYSINETLNEW--FTSSNPDHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETF 134

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +G
Sbjct: 135 RGAIMAVDKGELEAAKAYGMSPVMSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIG 194

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D+V +       T             Y++++I+   F +     + L E+K
Sbjct: 195 LEDMVRMSSLAAGTTKMPFT-------FYMAVAIIFLFFTSVSTGLLKLVERK 240


>gi|254239634|ref|ZP_04932956.1| hypothetical protein PA2G_00251 [Pseudomonas aeruginosa 2192]
 gi|126193012|gb|EAZ57075.1| hypothetical protein PA2G_00251 [Pseudomonas aeruginosa 2192]
          Length = 221

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 19/149 (12%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L+F    LG F    G  VS  F +L   ++   A ++AE  R GL AVP  Q+ AA 
Sbjct: 75  YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL V VG  D         + TG
Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTD---------DLTG 177

Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRL 388
             QA+ +     F Y +L+ ++   M +L
Sbjct: 178 VTQALNVKTFRTFEYFALAAVLYFAMAKL 206


>gi|329117083|ref|ZP_08245800.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907488|gb|EGE54402.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 215

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 11/163 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P +V++   + L+F  P  G F         P  +   I  +  +AA++AE+ R  + 
Sbjct: 63  GVPMIVVL---FVLYFGLPYYG-FQL-------PALLCALIGFTMVSAAYMAEVFRGSIE 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ EAA ALGL +    + V+LPQA R  +P L +  ++++K+SSL   +   D+ 
Sbjct: 112 AVDFGQWEAARALGLPYASIVKQVILPQAFRIAVPSLGNVIIDMVKSSSLTAMITVPDIF 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I ++    + + ++   IY  ++I++      +  K+A
Sbjct: 172 QNAKIIGSREWDYMSMYILVALIYWGITIVLEKSQAVIEEKLA 214


>gi|171320532|ref|ZP_02909558.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171094225|gb|EDT39306.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 219

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S  LG+V+ L    + R    +    L   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMALGLVVGLVVA-IMRIGSNRLASGLAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P LG        T+ P    ++  L+    A+++E +R  ++ + RGQ  AA +LGLTH
Sbjct: 77  LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 MQTLRHIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    +Y  LS ++     R+  +++L
Sbjct: 189 LAAAALYWVLSTLLTRLQGRVETRLSL 215


>gi|160936725|ref|ZP_02084092.1| hypothetical protein CLOBOL_01616 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440516|gb|EDP18261.1| hypothetical protein CLOBOL_01616 [Clostridium bolteae ATCC
           BAA-613]
          Length = 171

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 49/77 (63%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +  S  T A+ +E +R+ + AVP GQ+EA   +GL++ +    ++LPQA+R   P
Sbjct: 42  FPSAVVVFSVNTGAYASETIRAAIEAVPAGQLEAGYCVGLSYTQTMMRIILPQALRIAFP 101

Query: 326 PLTSQYLNLLKNSSLAV 342
           PL++  + L+K++SLA 
Sbjct: 102 PLSNSLIGLVKDTSLAA 118


>gi|190894713|ref|YP_001985006.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700374|gb|ACE94456.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 219

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 55/95 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + A + AE+ R+G+  VPRGQ EAA A  L  R+A   V+LPQA+  +IP L + 
Sbjct: 93  IGMGIHYATYTAEVYRAGIENVPRGQWEAARATNLATRQAWIHVVLPQAIPPMIPALANY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           ++ + K + L  A+   +L++   +I N   + IE
Sbjct: 153 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIE 187


>gi|13475942|ref|NP_107512.1| amino acid ABC transporter protein, permease protein [Mesorhizobium
           loti MAFF303099]
 gi|14026702|dbj|BAB53298.1| amino acid ABC transporter protein, permease protein [Mesorhizobium
           loti MAFF303099]
          Length = 219

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 71/134 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I L  +   + AE+ R+G+  VPRGQ EAA A  L+ R+    +++PQA+  +
Sbjct: 86  PPLVAGVIGLGLHYGTYTAEVYRAGIDNVPRGQWEAAKACNLSARQTWTHIIIPQAIPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L + ++ + K + L  A+   +L++   ++ N   + IE I +    +L++S+   +
Sbjct: 146 IPALANYFIAMFKETPLLSAITVLELMNQARSVANTYYRYIEPITLVGAFFLAISLCSVV 205

Query: 384 FMNRLNAKIALKEK 397
            +  L  +    E+
Sbjct: 206 LLRWLERRYGKIER 219


>gi|330892336|gb|EGH24997.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 231

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 23/180 (12%)

Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260
           KT    PL ++ ST+  L+ G+P L+ + L Y             FD P L    F  G 
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAG- 99

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  
Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P L + ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYVVAAFMYLGLTVL 210


>gi|270292048|ref|ZP_06198263.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|293364294|ref|ZP_06611020.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307702740|ref|ZP_07639692.1| nopaline transport system permease protein nocM [Streptococcus
           oralis ATCC 35037]
 gi|322374985|ref|ZP_08049499.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|270279576|gb|EFA25418.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|291317140|gb|EFE57567.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307623856|gb|EFO02841.1| nopaline transport system permease protein nocM [Streptococcus
           oralis ATCC 35037]
 gi|321280485|gb|EFX57524.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 240

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 9/169 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + + VL  + +LF   L + +  +  ++  L+Y++   I   P ++LI   Y L    
Sbjct: 23  IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLF--P 77

Query: 249 PVLGQF-NFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +L QF   IG      +   LY A   Y   T   ++EI+RS ++ V +GQ+EAA A+G
Sbjct: 78  SLLNQFLKSIGSDFDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAIG 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++ 
Sbjct: 138 LTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIA 186


>gi|325578843|ref|ZP_08148890.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325159667|gb|EGC71799.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 223

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 68/126 (53%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   A++ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+
Sbjct: 95  ALSLIFASYASQTLRGAIQAIPKGQWESGAALGLSRPYTFIHLIMPQVWRHALPGLSNQW 154

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +G  DL+   G I   T +      I   IYL ++++    + +L  +
Sbjct: 155 LVLLKDTALVSLIGVDDLMRQAGYINTNTHEPFTWYGIAALIYLVITLISQAGIRKLELR 214

Query: 392 IALKEK 397
               E+
Sbjct: 215 FTRFER 220


>gi|270261143|ref|ZP_06189416.1| transporter [Serratia odorifera 4Rx13]
 gi|270044627|gb|EFA17718.1| transporter [Serratia odorifera 4Rx13]
          Length = 238

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 110/224 (49%), Gaps = 26/224 (11%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFHEKTG---------KALPLLYISTFLIFGLPTLVLI-- 238
           V + +LG++L+ LFA   S  +   +          + LP + +  F+ FG   L+L+  
Sbjct: 19  VCALILGLILAMLFAVWESSRWKVVSWLGTAWVTLLRGLPEILVVLFIYFGSSQLLLMLS 78

Query: 239 ---ALKYQLHFDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
               L + L F  P+ L   NF     VSP F+   IAL+   +A+ ++ +R  L AVP+
Sbjct: 79  DGFTLNFGL-FQLPIQLAIDNF----EVSP-FLCGVIALALLYSAYASQTLRGALKAVPQ 132

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+  ALG++       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    
Sbjct: 133 GQWESGQALGMSTAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTK 192

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  +T +       W  I  ++ +++ LF      +I L+  +
Sbjct: 193 SIATRTQEP----FTWYVIAAAIYLVVTLFSQYAIKRIELRTTR 232


>gi|88855457|ref|ZP_01130121.1| glutamate permease [marine actinobacterium PHSC20C1]
 gi|88815364|gb|EAR25222.1| glutamate permease [marine actinobacterium PHSC20C1]
          Length = 309

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 6/116 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ Y  A I E +R+G+ ++P+GQ E  +++GLT  +   ++  PQA R ++P + +Q
Sbjct: 146 IGLAVYNGAIIGEALRAGISSLPKGQREGGLSVGLTSLQTRFIIEFPQAFRQMLPIILAQ 205

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + LLK++SLA  V + +L      + N  G        ++F   ++  +I L MN
Sbjct: 206 LVVLLKDTSLAYVVSYPELARTIKNLQNFYGSR------YLFTLFAVGFVIYLVMN 255


>gi|134295205|ref|YP_001118940.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138362|gb|ABO54105.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 229

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 6/189 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269
           H +  +A+   Y  T LI  +P LVL+ L +  +  +  L QF + +G   +  + F++ 
Sbjct: 42  HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLLGWDQIDIDPFVAG 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L     A+  E  R   ++VPRGQ+EA  A G++  +    ++ PQ MR  +P + +
Sbjct: 98  VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGARVFARIMFPQMMRFALPGIGN 157

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  L+K ++L   +G AD+V         T      IL+   IYL+++ +  L + +L 
Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217

Query: 390 AKIALKEKK 398
            + ++  + 
Sbjct: 218 KRYSMGVRH 226


>gi|217033979|ref|ZP_03439402.1| hypothetical protein HP9810_883g49 [Helicobacter pylori 98-10]
 gi|216943612|gb|EEC23060.1| hypothetical protein HP9810_883g49 [Helicobacter pylori 98-10]
          Length = 237

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 101/203 (49%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++F   +     +HF  KT  A    Y+S  LI G P LV I + +   +
Sbjct: 44  IISFILGLFIAVFVALIKIAPPKHFIHKTLLAGVNFYVS--LIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233


>gi|149203650|ref|ZP_01880619.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. TM1035]
 gi|149142767|gb|EDM30809.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. TM1035]
          Length = 217

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS YT+A+ AEIVR G+ AVP     AA +LGLT  +  R ++LP A R  +P     
Sbjct: 93  IVLSLYTSAYCAEIVRGGIDAVPEITRRAARSLGLTWGQDMRYIVLPLATRVALPSWIGL 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L ++K+S+L   V   +L+     +I +  + + ++LI    Y  +S  +A F   L  
Sbjct: 153 ALGVMKDSALVYVVQVTELLKSTQILITRLQEPLFLLLICGAFYFVISFPLARFGGYLEK 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|251788515|ref|YP_003003236.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537136|gb|ACT05757.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 221

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 59/104 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EAA  LGL+  +    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAARVLGLSRAQTFTRVILPPALQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SS+   V F +L      I ++T  + E+ L+    YL LS+++
Sbjct: 162 SSVVSQVSFEELTFAANLIQSRTFLSFEVYLVTTLCYLVLSMLM 205


>gi|195973407|gb|ACG63350.1| allantoate transport membrane protein [Klebsiella oxytoca M5al]
          Length = 221

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 57/102 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EIVR+G+   P+GQ EA   LGLT  +    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIVRAGIQVTPKGQWEAGRVLGLTRTQTFIQVILPPALQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V +  L      I ++T  + E+ L+   IYL+LSI
Sbjct: 162 SSVGCQVSYEKLTFAAHLIQSRTFLSFEVYLVTTGIYLALSI 203


>gi|154174776|ref|YP_001408465.1| glutamineABC transporter membrane-spanning permease [Campylobacter
           curvus 525.92]
 gi|112802739|gb|EAU00083.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter curvus 525.92]
          Length = 217

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 26/174 (14%)

Query: 220 PLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           PLL    FL +GLP L V I       F   V+G   F+GGS                  
Sbjct: 64  PLLIQLFFLYYGLPKLGVQIG-----SFTCAVIG-LTFLGGS------------------ 99

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            ++AE  R G  AV + Q+EA +++GL+  +  R V++PQA    +P +++  + LLK +
Sbjct: 100 -YMAESFRLGFEAVRKSQIEAGLSIGLSQNQLLRYVIVPQAFGVSLPSISANVIFLLKET 158

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S+   V  ADLV V   II    +  E + + +  YL L + I+L +  L  ++
Sbjct: 159 SIVSIVALADLVYVAKDIIGLYYKTDEALFMLVVSYLILILPISLALTWLEKRM 212


>gi|296159044|ref|ZP_06841871.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295890605|gb|EFG70396.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 229

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 15/164 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDK 248
           F+FVLG++ +  A +LS++   +    +  +Y  T L+ G+P LVL+ L +   Q+  + 
Sbjct: 27  FAFVLGLLGA--AAKLSKN---RISNGVGTVY--TTLVRGVPDLVLMLLLFYSIQIWLNN 79

Query: 249 PVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 + +G   +  + F++    L     A+  E  R   +AVPRGQ+EA  A G+T 
Sbjct: 80  LT----DLLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMTG 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            +    V+ PQ MR  +P + + +  ++K ++L   +G AD+V 
Sbjct: 136 WQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVK 179


>gi|168485720|ref|ZP_02710228.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|168490507|ref|ZP_02714650.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|221231430|ref|YP_002510582.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225858442|ref|YP_002739952.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|298229828|ref|ZP_06963509.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255468|ref|ZP_06979054.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502399|ref|YP_003724339.1| glutamine ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|183571195|gb|EDT91723.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|183574810|gb|EDT95338.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|220673890|emb|CAR68396.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225721460|gb|ACO17314.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|298237994|gb|ADI69125.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 219

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL AV +GQ +A ++ G T  +    ++LPQA R ++P + SQ+
Sbjct: 90  AFTLFTSAALAEIIRGGLNAVDKGQYKAGMSQGFTSAQILYYIILPQASRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 37.0 bits (84), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E   N+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVHNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|254245536|ref|ZP_04938857.1| Amino acid permease [Burkholderia cenocepacia PC184]
 gi|124870312|gb|EAY62028.1| Amino acid permease [Burkholderia cenocepacia PC184]
          Length = 230

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 25/233 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224
           S P L        K  V S V G    +VL++   R S     F      AL  L   Y+
Sbjct: 10  SLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYV 69

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 70  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     +I  T Q + + L    +Y  L  ++         +++L  +
Sbjct: 177 TVTELLRSAQEVIAATYQPLPLCLAAAAVYWVLCQILEWVQRWYEKRLSLPSR 229


>gi|158424907|ref|YP_001526199.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331796|dbj|BAF89281.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 227

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 66/113 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +EIVR+GL ++ + Q+EAA  LGL+  +    V++  A+  + P LTSQ
Sbjct: 95  LALVVNVGAYTSEIVRAGLESIHKSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           Y+ L+  SS+   +   +L +V   I + T ++ E  ++   +YL+LS ++ L
Sbjct: 155 YVLLMLASSITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYLALSFVVRL 207


>gi|153215601|ref|ZP_01950046.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124114689|gb|EAY33509.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587]
          Length = 222

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 22/217 (10%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           + T+ ++   S ++G +LSL  T    +  H      +A+  L+       G P LV I 
Sbjct: 13  LGTSLQLTAASLLVGCILSLLMTVSLVMRTHVVHWFSRAVITLFT------GTPLLVQIF 66

Query: 240 LKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L Y      P  GQF +I  S +      P F ++ +AL+  TAA+  ++ +    A+P 
Sbjct: 67  LVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYSTQLFKGAFNAIPS 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA  +   DL+    
Sbjct: 120 GQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 179 RINAQTYDTLTVFGIAGAFYLAVNGILTLIFRQIEKK 215


>gi|15890305|ref|NP_355977.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158506|gb|AAK88762.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|325062202|gb|ADY65892.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 234

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 68/115 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++   AA+  EI+R+G+ AV + Q+EA  ALG T  +  R V++  A+  + P L SQ
Sbjct: 95  IGMTINLAAYSTEIIRAGIEAVHKSQIEAGEALGFTKYQIYRHVIIVPAIAKVYPSLCSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           ++ ++  SS+  A+   +L +    + +QT ++ E+ ++   IYL+L++ + L +
Sbjct: 155 FVLMMLASSICSAISTHELAAAAAFVESQTYRSFEVYIVVTLIYLALALSLRLIL 209


>gi|315633804|ref|ZP_07889093.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Aggregatibacter segnis ATCC 33393]
 gi|315477054|gb|EFU67797.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Aggregatibacter segnis ATCC 33393]
          Length = 220

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 13/210 (6%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           V S VLG+ L  LFA   +  F    GK   LL     L+ GLP ++++ L Y   F   
Sbjct: 21  VCSLVLGLFLGMLFAVLEANRF---VGKPTALL---VALLRGLPEILVVLLVY---FGSS 71

Query: 250 VLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            L     + G  V    F     ALS   AA+ ++ +R  + A+ +GQ E+  ALGL+  
Sbjct: 72  EL--VELLTGEYVEFGAFGCGVFALSLIFAAYASQTLRGAIQAIAKGQWESGTALGLSKG 129

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
                +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q      
Sbjct: 130 YTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTNTHQPFTWYG 189

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I   IYL ++++  + + +L  +    E++
Sbjct: 190 IAALIYLLVTLVSQVGIRKLELRFTRFERE 219


>gi|288959823|ref|YP_003450163.1| hypothetical protein AZL_a00880 [Azospirillum sp. B510]
 gi|288912131|dbj|BAI73619.1| hypothetical protein AZL_a00880 [Azospirillum sp. B510]
          Length = 263

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 12/167 (7%)

Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P LVLI A  Y L F+         IGG  V  P+++   + L+   +A IAEI R  + 
Sbjct: 104 PHLVLIFATTYALPFEI-------AIGGWHVPFPDWLKAVVGLAVPASAHIAEIARGAIQ 156

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P  Q EAA +LG    +  R ++LPQ +R  +P   + Y ++   S+LA  VG  +L+
Sbjct: 157 SIPAAQWEAAGSLGFGRLQTLRWIILPQGLRRSLPAWMNLYASIAMGSALASLVGVGELL 216

Query: 351 SV---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                  T + +T   I + L  +  + +    I+    RL  + A+
Sbjct: 217 HAATDASTAVRRTDFTIAVYLTVLVAFFAYCYPISRLTQRLERRFAV 263


>gi|222082456|ref|YP_002541821.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727135|gb|ACM30224.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 213

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 11/153 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV + L Y L    PV+G  N        P  ++  I LS  TAA+ AE +R G  
Sbjct: 58  GVPLLVQLLLIYNLL---PVIG-INV-------PSIVAAIIGLSLCTAAYQAENLRGGFA 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP G +E+A  +GL+ R+  R + +P A+R   P L ++ + +LK SSL   VG  +L 
Sbjct: 107 SVPTGLVESAEMVGLSPRQIFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            +   +   T   +++      IYL+++ ++AL
Sbjct: 167 RMAQDLAGSTFLPLQLFASAGLIYLAINWIVAL 199


>gi|171780125|ref|ZP_02921029.1| hypothetical protein STRINF_01913 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281473|gb|EDT46908.1| hypothetical protein STRINF_01913 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 215

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A +AEI+R GL  V  GQ EA +A G+T+ +    ++ PQA R ++P + SQ+
Sbjct: 86  AFTVFTSAALAEIIRGGLNGVDHGQTEAGLAQGMTNFQIFIYIVFPQAFRKMLPAIISQF 145

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 146 VTVIKDTSLLYSV 158



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +++F  ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 12  ILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPVLHLISSIYIEFVRNVPNLLWIFII 71

Query: 149 Y 149
           +
Sbjct: 72  F 72


>gi|167841846|ref|ZP_02468530.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia thailandensis MSMB43]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 2/139 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+SP F ++ I  +    A++ EI R+G  +V R ++EAA  LG +  +  R V+ P 
Sbjct: 85  GVTLSP-FSAVLIGATFNAGAYLCEIQRAGFASVRRAEIEAAEVLGFSTSQIVRYVIFPH 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            ++ + PPL++Q++ +   +S+A   G  +L      + +QT  +IE   +   +Y++++
Sbjct: 144 VLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTFNLSSQTYLSIEAFSVAAVMYIAIT 203

Query: 379 IMIALFMNRLNAKIALKEK 397
            +IA F      + A + K
Sbjct: 204 -LIATFALAAFGRYACRAK 221


>gi|255527438|ref|ZP_05394311.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296187467|ref|ZP_06855862.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255508884|gb|EET85251.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296047989|gb|EFG87428.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 237

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 4/119 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  +  + AFI+EI+RS  ++V  GQ EAA+++G+ + +  R +++PQA +  +P L + 
Sbjct: 102 ITFALNSGAFISEIMRSAYLSVDAGQSEAALSIGMNNVQCLRRIIIPQAFKICLPNLGNI 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMN 386
            ++LLK +S    +G  D++     +I   G   + +E  L    IY  +SI+I  F++
Sbjct: 162 IISLLKETSYVFTIGVVDILG-KAKLIGSDGYGVRQLEAFLAVALIYWVISIVIEQFIS 219


>gi|229591026|ref|YP_002873145.1| putative inner membrane component of binding-protein-dependent
           amino acid transport system [Pseudomonas fluorescens
           SBW25]
 gi|229362892|emb|CAY49802.1| putative inner membrane component of binding-protein-dependent
           amino acid transport system [Pseudomonas fluorescens
           SBW25]
          Length = 222

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +    +A+ AE  R+G+IAV +GQ EAA ALG+      R V+LPQA R  +PP  + 
Sbjct: 95  IGMGIAYSAYQAENFRTGIIAVEQGQREAAEALGMRSTLMMRRVILPQAFRIALPPYGNT 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            + +LK+SSL   +  A++   G  I + T Q + +
Sbjct: 155 LVMMLKDSSLVSTITVAEMTRQGQLIASSTFQNMTV 190


>gi|170761003|ref|YP_001786791.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407992|gb|ACA56403.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 221

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 58/85 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ R ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTSIQSMRRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGT 355
           +++++K S+LA  +G  ++++V  +
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQS 180


>gi|134102703|ref|YP_001108364.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915326|emb|CAM05439.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 220

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 2/133 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP  ++  + L  + A ++AE+ R+G+  VP GQ EAA AL L  R+    V+LPQ
Sbjct: 82  GIQMSP-LLTGVVGLGLHYATYVAEVYRAGIDGVPAGQWEAATALNLPTRRVWTDVILPQ 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+   IP L +  + L K+    VA+   +  +V   +   T +  E I +   +YL+++
Sbjct: 141 AIPRSIPALGNYLIALFKDVPQLVAITVLEPFTVAREVTADTFRPFEAITLAGLLYLAVT 200

Query: 379 IMIALFMNRLNAK 391
           ++++ ++ RL  +
Sbjct: 201 LVMS-YLGRLAER 212


>gi|238795812|ref|ZP_04639325.1| Arginine transport system permease protein artQ [Yersinia
           mollaretii ATCC 43969]
 gi|238720275|gb|EEQ12078.1| Arginine transport system permease protein artQ [Yersinia
           mollaretii ATCC 43969]
          Length = 238

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFA----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V +  LG+VL+ LFA    +RL    +  TG     + LP + +  F+ FG   L+++  
Sbjct: 19  VCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTLLRGLPEILVVLFIYFGSSQLLMMLS 78

Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L+ F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYVIAAAIYLVVTLL 218


>gi|327459025|gb|EGF05373.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 23/185 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247
           + S +LG +  +  T      H K  + L   Y+    I  +P LVL+ L Y     +F+
Sbjct: 34  IISLILGTIFGIIMTS-----HSKVVRFLSRAYLE--FIRVMPQLVLLFLVYFGLARNFN 86

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             + G+             +S  I  S +  A + ++VR  + ++P+ Q E+  ALGL+ 
Sbjct: 87  INISGE-------------LSAIIVFSLWGTAEMGDLVRGAITSLPKHQFESGQALGLSQ 133

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R+    +++PQ +R ++P   +    ++K +SL V +G  ++V VG  II+    +I   
Sbjct: 134 RQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQIIDSNRLSIPSA 193

Query: 368 LIWMF 372
             W++
Sbjct: 194 AFWIY 198


>gi|309390081|gb|ADO77961.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 228

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 73/133 (54%), Gaps = 7/133 (5%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I +   +AA+ ++I R  + +V   QM AA++LG++  KA   ++ PQA+R  +P
Sbjct: 87  FKAAVIGIGLRSAAYQSQIYRGAIQSVGGSQMNAALSLGMSKMKAFFYIISPQAIRIALP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+ ++   +LK++SLA  +G  +L+  G   I    +        M IYL+++ +  +  
Sbjct: 147 PVANESAIVLKDTSLAFTIGVVELLRQGEYFIATANRP-------MLIYLTIAAIYFVLT 199

Query: 386 NRLNAKIALKEKK 398
             +N  ++L EKK
Sbjct: 200 TIVNGALSLFEKK 212


>gi|163816015|ref|ZP_02207385.1| hypothetical protein COPEUT_02195 [Coprococcus eutactus ATCC 27759]
 gi|158448825|gb|EDP25820.1| hypothetical protein COPEUT_02195 [Coprococcus eutactus ATCC 27759]
 gi|295093671|emb|CBK82762.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Coprococcus sp. ART55/1]
          Length = 228

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 92/182 (50%), Gaps = 16/182 (8%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           PL Y+  F+++   G P ++ + + Y    L F  PV G     GG  V+   +S  +  
Sbjct: 50  PLSYLMKFIVWIVRGTPLMIQLLIIYYFPGLVFHNPVWGGGE--GGRFVAAS-VSFIVNY 106

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +CY     +EI R G+  +P GQ EA + LG+T ++    V L Q ++ I+P ++++ + 
Sbjct: 107 ACY----FSEIYRGGIQGIPVGQEEAGLVLGMTPKQIFFKVKLLQMIKKIVPAMSNEIIT 162

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           L+K++SLA  +   +++  G   +  +     AI  +    F YL  + ++ + + +L  
Sbjct: 163 LVKDTSLARIIALQEIIWAGQAFMKGSQGISGAIWPLFFCAFYYLIWNGVLTVLLGKLEK 222

Query: 391 KI 392
           K+
Sbjct: 223 KL 224


>gi|83643771|ref|YP_432206.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83631814|gb|ABC27781.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 75/133 (56%), Gaps = 1/133 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++SP   +  +AL  +  A+++E+ RSG+  V +GQ EAA AL L+     R V+LPQ
Sbjct: 85  GVSMSP-MTTGVLALGAHYGAYLSEVFRSGIDGVEKGQWEAARALNLSQLTTYRDVILPQ 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R++IP   +  + + K +    A+   +++     + ++  + +E   +   +YL+ S
Sbjct: 144 ALRAMIPATGNYIIAMFKETPQLSAITLLEMLQTAKILGSENFRYLEPFTLVGLLYLAFS 203

Query: 379 IMIALFMNRLNAK 391
           I+ AL ++++  +
Sbjct: 204 IVAALGVHQVERR 216


>gi|119387646|ref|YP_918680.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378221|gb|ABL72984.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 251

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 1/125 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S EF ++ +A+    +++  EI+R+G+ +V +GQ EA+  LGLT  ++  LV+LP 
Sbjct: 108 GFKLSAEFCAV-LAIVINVSSYTCEIMRAGIESVRKGQREASDCLGLTWLQSLFLVVLPP 166

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A   + P L SQ++ ++  +SL   +   +L S    I + T ++ EI  +   IY+ L+
Sbjct: 167 ATERVYPALVSQFILIMLATSLVSQISAEELTSTAARIDSMTFRSFEIYTVVALIYIGLA 226

Query: 379 IMIAL 383
            +  L
Sbjct: 227 FVFRL 231



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 79  YTSD----SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           YT D    + Y   +L G V T  L+   +I   ++GTL+  GR + +KL+  IC +YVE
Sbjct: 27  YTFDFSFLAEYWPQLLKGLVQTAQLSLLSIIFGFLLGTLLAIGRTAQSKLLRRICAIYVE 86

Query: 135 VFRNIPPLVVIFFLYKSVLSV 155
             RN P LV +F +Y  + SV
Sbjct: 87  AIRNTPLLVQMFMIYFGLASV 107


>gi|309379287|emb|CBX22060.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 222

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 53/85 (62%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+ R+  R + LPQ++R ++P   + +  ++
Sbjct: 99  WGIAEMGDLVRGALESIEKHQVESGLALGLSRRQVFRYIELPQSVRRVLPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|238792193|ref|ZP_04635828.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           intermedia ATCC 29909]
 gi|238728430|gb|EEQ19949.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           intermedia ATCC 29909]
          Length = 230

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIG-GSTVSPEFMSLYIALSCYTAAFIA 282
           T L+ G+P LV++ L   L F   +L  G  + +G G      F+S  +A+     A+  
Sbjct: 53  TTLVRGIPELVIMLL---LFFGGEMLVNGFLSLLGVGPVRFNTFISGVLAIGIVFGAYYT 109

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R     V RGQ+EAAIA G++  +  R ++LPQ +   IP + + +L L+K S+L  
Sbjct: 110 ETFRGAFQTVDRGQLEAAIAYGMSPAQVFRRIMLPQMLSFAIPGINNNWLGLMKASALIS 169

Query: 343 AVGFADLVSVGGTIINQTGQAIE 365
            +G  D+V     +  Q G+A +
Sbjct: 170 ILGLEDMV----WLAEQAGRATQ 188


>gi|107023342|ref|YP_621669.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116690425|ref|YP_836048.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170733745|ref|YP_001765692.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|206560949|ref|YP_002231714.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|105893531|gb|ABF76696.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116648514|gb|ABK09155.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169816987|gb|ACA91570.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|198036991|emb|CAR52912.1| histidine transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 229

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 10/133 (7%)

Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           + T LI G+P LVL+     +L+  L+     LG         + P F++  + L     
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQI----DIDP-FLAGVLVLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K++
Sbjct: 107 AYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKST 166

Query: 339 SLAVAVGFADLVS 351
           +L   +G AD+V 
Sbjct: 167 ALVSIIGLADVVK 179


>gi|325293282|ref|YP_004279146.1| Inner membrane arginine ABC transporter permease protein
           [Agrobacterium sp. H13-3]
 gi|325061135|gb|ADY64826.1| Inner membrane arginine ABC transporter permease protein
           [Agrobacterium sp. H13-3]
          Length = 267

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 11/172 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQF 254
           +G+V+  F   L+    EK+ +    +Y + F   GLP L+ L  + Y +         +
Sbjct: 66  VGLVIG-FLIALAAQSEEKSLRLAAGVYTTIFR--GLPELLTLFIVYYGIQMLLQSAAGY 122

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             I G      F++  +ALS   +++ +E++ S   A+P+GQ EA  ALGL+      LV
Sbjct: 123 VGITGPVEINAFVAGMVALSVVFSSYSSEVLLSAFKAIPKGQYEAGHALGLSRGHTMVLV 182

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++PQ +R  +P +T+ ++ LLK++S    +G AD       I+ QTG A  +
Sbjct: 183 IIPQLVRIALPGMTNLWVILLKDTSYVSIIGLAD-------IVRQTGIAARV 227


>gi|302560483|ref|ZP_07312825.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           griseoflavus Tu4000]
 gi|302478101|gb|EFL41194.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           griseoflavus Tu4000]
          Length = 216

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 30/206 (14%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SF LG+V +L     +R      G      +  PLL    FL + LP       ++ + F
Sbjct: 33  SFALGLVWALLMRVPTRWVTWPVGAVTEFVRNTPLLVQLFFLFYVLP-------EWGITF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                G F                 A+  + + +  ++ R+G+ AVP GQ EAA AL L 
Sbjct: 86  SALTTGVF-----------------AIGLHYSTYTMQVYRAGIEAVPVGQWEAATALNLP 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+    V+LPQA+R ++P L +  +++LK++ L +A+   +++        Q  Q  E 
Sbjct: 129 LRRTWTAVILPQAVRRVVPALGNYVISMLKDTPLLMAITVLEMLGEARLFSQQNFQFTEP 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +  F ++ +S + +L +  L  ++
Sbjct: 189 LTVIGFAFIVISYLASLALRALERRL 214


>gi|91782440|ref|YP_557646.1| ABC basic amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|91686394|gb|ABE29594.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 229

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 15/164 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDK 248
           F+FVLG++ +  A +LS++   +    +  +Y  T L+ G+P LVL+ L +   Q+  + 
Sbjct: 27  FAFVLGLLGA--AAKLSKN---RISNGVGTVY--TTLVRGVPDLVLMLLLFYSIQIWLNN 79

Query: 249 PVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 + +G   +  + F++    L     A+  E  R   +AVPRGQ+EA  A G+T 
Sbjct: 80  LT----DLLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMTG 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            +    V+ PQ MR  +P + + +  ++K ++L   +G AD+V 
Sbjct: 136 WQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVK 179


>gi|163739218|ref|ZP_02146630.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387618|gb|EDQ11975.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 258

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 6/173 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  QF +I  S + P     +    +AL+   A +  E
Sbjct: 88  VIRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGE 145

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R     V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   
Sbjct: 146 VMRGAFSGVAKGQLEAAKAYGMPRLTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVAT 205

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   D+ +V   + + T    E +L+   +Y++++ +I L   R   ++  + 
Sbjct: 206 ITVLDIYAVSSRVRSDTFIVYEPLLLLALVYMAIAGVITLAFKRFEDRVPQRR 258


>gi|325523119|gb|EGD01520.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 240

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 9/181 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIA 272
           +A   LY + F   G+P L++I   Y  +F    L    G++  + G    P F+   +A
Sbjct: 55  RAAGDLYTTVFR--GVPELLVI---YLFYFGGSSLVTMVGRWFGVDGFIGLPPFLIGALA 109

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +   + A+ AE+ R  ++AV RG++EAA A+G+      R +L+PQ +R  +P + + + 
Sbjct: 110 VGMISGAYQAEVYRGAVLAVSRGELEAARAIGMPTATLMRRILIPQVLRYALPGIGNVWQ 169

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             LK+S+L    G A+L+         T Q     +    +YL ++ M     N   +++
Sbjct: 170 LSLKDSALISVTGLAELLRASQVAAGSTHQYFVFFIAGGTLYLLMTAMSNRIFNHAESRV 229

Query: 393 A 393
           A
Sbjct: 230 A 230


>gi|300309584|ref|YP_003773676.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300072369|gb|ADJ61768.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 215

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 11/136 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G P LVL+ +     F  P L      G  TV     +   A+  YT+AF+ EI R 
Sbjct: 55  LIQGTPLLVLMGV----CFYGPALA-----GVGTVE-ALPAAATAMLIYTSAFLGEIWRG 104

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGF 346
            + +V + Q EAA  +GL+  +  R+++LPQA+R   PP     + ++KN+S+A + +GF
Sbjct: 105 CIQSVHKSQWEAAECIGLSRWQRMRMIVLPQALRMATPPTVGFAVQVIKNTSVASLVIGF 164

Query: 347 ADLVSVGGTIINQTGQ 362
           A+L      + N T Q
Sbjct: 165 AELSYNAKVLNNSTFQ 180


>gi|291286085|ref|YP_003502901.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290883245|gb|ADD66945.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 222

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 55/86 (63%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F + ++A+     A+ AE+VR  ++AVP+GQ EAA++LGL+  K    ++ PQA+  ++
Sbjct: 86  KFTAGFVAVGMNLGAYGAELVRGAILAVPKGQWEAALSLGLSPFKRMVRIIFPQALLIML 145

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLV 350
           PP  +  + LLK ++L   +  ADL+
Sbjct: 146 PPWGNLLIELLKGTALVSLISVADLM 171


>gi|218512395|ref|ZP_03509235.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 173

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 1/136 (0%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G T++P   +  +AL     A+ AE+VR  + AV R Q EA +AL L+  +  R V+LP
Sbjct: 31  AGLTLTP-LQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEACVALNLSRYQRMRHVILP 89

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+  ++P   +  + LLK +++   +   D+      +  QTG  +      + +Y  +
Sbjct: 90  QALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGNTLVPFATILILYFLM 149

Query: 378 SIMIALFMNRLNAKIA 393
           ++ I+  M RL  ++A
Sbjct: 150 ALAISAAMRRLERRMA 165


>gi|330430187|gb|AEC21521.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Pusillimonas sp. T7-7]
          Length = 220

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 15/202 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           IF FS + G +L  F   + R    +  +    +Y+S  ++ G P LV +   + +++  
Sbjct: 23  IFAFSAMFGGLLVGFVLAVLRIIPSRWTQIPATVYVS--MMRGTPLLVQV---FIIYYGL 77

Query: 249 PVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P +G  F+ +             +ALS    A+I+E +R  ++ + RGQ  A  +LGL +
Sbjct: 78  PSIGISFDPLTAGV---------LALSLNAGAYISESLRGAIVGISRGQWSAGYSLGLNY 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    V++PQA+R  +P +++  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 WQNLHYVVMPQALRLAVPSMSNSLISLIKDTSLVSVITVTELLLATKDVIATTFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLN 389
           L    IY  LS+ +     RL 
Sbjct: 189 LAAAGIYWILSLCLEQVQARLE 210


>gi|227329359|ref|ZP_03833383.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 221

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 24/155 (15%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP+L L          K   GQ             +++ I L  Y+     EI+R
Sbjct: 75  FIVFGLPSLGL----------KLTAGQ----------AALLAMLINLGAYST----EIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+   P+GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V +
Sbjct: 111 AGIQVTPKGQWEAARVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSY 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++T  + E+ L     YL LS+++
Sbjct: 171 EELTFAANLIQSRTFLSFEVYLATTLCYLMLSVLM 205


>gi|304395108|ref|ZP_07376992.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357361|gb|EFM21724.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 230

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 231 GLPTLVLIALKY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           G+P +V+I L Y      LHF   +LG + N    +   P ++ + +ALS   AAF AE+
Sbjct: 63  GVPMVVVIFLAYYGLPPALHFVATLLGVEVN----AHSLPNWVIIIVALSACVAAFQAEV 118

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            +  L +   GQ +AA++LG +  +  R V+ PQ + + IP L + ++ ++K  SLA A+
Sbjct: 119 WKGALNSFDNGQSDAALSLGYSGGQLFRRVMFPQIIVAAIPDLANAFMVIMKALSLAFAI 178

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              D+ +            +E  LI +  Y+ ++ ++    +R+ A + ++
Sbjct: 179 EVVDIFAQAQLTAALNFYYLEAFLIAVVFYMVIAYLVTRIADRIEAALRVR 229


>gi|87121346|ref|ZP_01077236.1| polar amino acid uptake family ABC transporter, permease protein
           [Marinomonas sp. MED121]
 gi|86163503|gb|EAQ64778.1| polar amino acid uptake family ABC transporter, permease protein
           [Marinomonas sp. MED121]
          Length = 279

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 65/122 (53%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +IAL+   AA+  EI+R     VP+G++EAA A G+   K    + LP+A++  +P +  
Sbjct: 154 FIALTLSVAAYEGEIMRGAFAGVPKGELEAAKAFGMPPFKILSRIWLPRAIQRTLPVIGG 213

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +  LK + L   +   D  +V   I  +T    E +L+   IYLSL+ +IAL  + L 
Sbjct: 214 EVILQLKATPLVATITLIDTYAVFSKIRQETYIVYEPLLLMTGIYLSLAGIIALLFHYLE 273

Query: 390 AK 391
            +
Sbjct: 274 KR 275


>gi|300715446|ref|YP_003740249.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299061282|emb|CAX58391.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 222

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 60/104 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LGLT  +    V+LP +++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRLQTFMRVVLPPSLKRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SS+   V + +L      I ++T  + E+ L+   IYL+LSI++
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSIVM 205


>gi|134295623|ref|YP_001119358.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138780|gb|ABO54523.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 259

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 25/234 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224
           S P L        K  V S V G    +VL++   R S     F      AL  L   Y+
Sbjct: 39  SLPVLAQGAVLTVKFAVLSMVFGLFGAVVLAMMGIRQSEALEGFERIWVNALAWLARGYV 98

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 99  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 145

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 146 MRGAINGIARGQWLAAYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 205

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L+     +I  T Q + + L    +Y  L  ++         +++L  + 
Sbjct: 206 TVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPGRH 259


>gi|293375604|ref|ZP_06621878.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292645821|gb|EFF63857.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 219

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 24/139 (17%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L +    Y       VLG   F+GGS                   
Sbjct: 64  PLLIQLFFLYFGLPKLGIFLSSYACG----VLG-LTFLGGS------------------- 99

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE  RSGL ++P  QME+ ++LGLT  +  R ++ PQA+   +P  ++  + L+K +S
Sbjct: 100 YMAEAFRSGLESIPDIQMESGLSLGLTKWQVLRYIIFPQAVAVSLPAFSANVIFLIKETS 159

Query: 340 LAVAVGFADLVSVGGTIIN 358
           +   V  ADL+ V   +I 
Sbjct: 160 VFSVVALADLMYVAKGLIG 178


>gi|258646474|ref|ZP_05733943.1| putative amino-acid permease protein YxeN [Dialister invisus DSM
           15470]
 gi|260403882|gb|EEW97429.1| putative amino-acid permease protein YxeN [Dialister invisus DSM
           15470]
          Length = 234

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%)

Query: 249 PVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           PV   F+   G+ V P     + S+Y+    Y  A+ +E +R  L +V  GQ EAA+A+G
Sbjct: 83  PVFSAFS---GTEVKPFDVSPYWSVYLCFILYNTAYQSENIRGALRSVDHGQYEAAVAMG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +A   ++LPQA    +P   + YL  +K  +L   V   D+ +          + +
Sbjct: 140 MTSFRAFTRIVLPQAFVVALPAFFTYYLKTIKLLALVFTVKVVDMFAKADIFSALYNRRM 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           E  +     Y  L+I++    +R   K+
Sbjct: 200 EPYIADAIAYWGLAILLTFLFDRWEKKL 227


>gi|226323644|ref|ZP_03799162.1| hypothetical protein COPCOM_01419 [Coprococcus comes ATCC 27758]
 gi|225207828|gb|EEG90182.1| hypothetical protein COPCOM_01419 [Coprococcus comes ATCC 27758]
          Length = 228

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 73/137 (53%), Gaps = 7/137 (5%)

Query: 220 PLLYISTFLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           PL +++  +++   G P ++ + + Y      P L   N I G   +  F++  ++    
Sbjct: 50  PLSWLARLIVWVIRGTPLMIQLLIIYYF----PGLVLHNPIWGGGETGRFLAAAVSFIIN 105

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            A + +EI R G+  VP GQ EA + LG+T  +    + L Q ++ I+PP++++ + L+K
Sbjct: 106 YACYFSEIYRGGIQGVPEGQKEAGLVLGMTKHQIFFKITLLQMIKRIVPPMSNEIITLVK 165

Query: 337 NSSLAVAVGFADLVSVG 353
           ++SLA  +   +++  G
Sbjct: 166 DTSLARIIALQEIIWAG 182


>gi|124486251|ref|YP_001030867.1| hypothetical protein Mlab_1435 [Methanocorpusculum labreanum Z]
 gi|124363792|gb|ABN07600.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanocorpusculum labreanum Z]
          Length = 255

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 13/153 (8%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           +SR +     K L  LY+  F   G P LVL+   + L+F  P +G         V   +
Sbjct: 67  VSRVYGPTPVKWLAKLYVIFFR--GCPLLVLL---FILYFGLPSIG--------IVLGSY 113

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S  +      +A+ +E +R GL ++ RGQ+ AA +LG+T  +    V++PQA+R  +P 
Sbjct: 114 FSALVGFILCNSAYNSEYLRGGLQSIKRGQLLAARSLGMTKAQGVMYVVVPQALRRALPG 173

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           ++++++ L+K SSLA  V   +L      I ++
Sbjct: 174 VSNEFIYLIKYSSLAYVVAVIELTGAAKIIASK 206


>gi|330861366|emb|CBX71601.1| histidine transport system permease protein hisQ [Yersinia
           enterocolitica W22703]
          Length = 198

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 6/128 (4%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIG-GSTVSPEFMSLYIALSCYTAAFIA 282
           T L+ G+P LV++ L   L F   +L  G F  +G G      F+S  +A+     A+  
Sbjct: 53  TTLVRGIPELVIMLL---LFFGGEMLVNGFFGLLGLGPVRFNTFVSGVLAIGIVFGAYYT 109

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R     V RGQ+EAA+A G+  R+    ++LPQ +   IP + + +L L+K S+L  
Sbjct: 110 ETFRGAFQTVERGQLEAAVAYGMRPRQVFWRIMLPQMLSFAIPGINNNWLGLMKASALIS 169

Query: 343 AVGFADLV 350
            +G  D+V
Sbjct: 170 ILGLEDMV 177


>gi|295676370|ref|YP_003604894.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295436213|gb|ADG15383.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 219

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 62/104 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  ++ + +GQ  A+ +LGL+ R+  R V+ PQA+R  +P L++ 
Sbjct: 92  IALSANVAAYLSESMRGAILGIHQGQWLASYSLGLSRRQTLRYVIAPQALRIAVPSLSNS 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            ++L+K++SL   +   +L+     +I  T Q + + L    +Y
Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEMIASTYQPLPLYLAAAAVY 195


>gi|317049449|ref|YP_004117097.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951066|gb|ADU70541.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 269

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 11/163 (6%)

Query: 233 PTLVLI-ALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P LVL+ ++ Y L +   +LG QF      T+SP F ++ + LS  TAA  AE++R  + 
Sbjct: 108 PWLVLLFSMLYLLPYRVELLGVQF------TLSPLFKAI-VGLSLPTAANFAEVIRGAVN 160

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQ E+A +LG +  +  R+V+LPQA+R IIP   + Y  L  +++LA   G  ++V
Sbjct: 161 SVHSGQWESARSLGYSPWQIYRIVILPQALRRIIPGWMNLYALLAISTALATVTGVQEVV 220

Query: 351 SVGGTII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++  T +     G  I   +  + ++      IAL   RL  +
Sbjct: 221 TLLRTTLATESEGSLIYFYVTVLLMFFCYCYPIALLARRLENQ 263


>gi|325518276|gb|EGC98023.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 170

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 41/57 (71%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  +A R V+LPQA+R
Sbjct: 112 EFVAGWVGLSAYTAAFVAEECAAGLRGVRRAQHDAAAALGLTPWQALRYVVLPQAVR 168


>gi|304394878|ref|ZP_07376762.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357131|gb|EFM21494.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 228

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 73/123 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    AA+ +EI+R GL AV +  +EAA   G++  K    + LP A+R  +P  +++
Sbjct: 98  LALILNDAAYTSEILRGGLRAVSQQSLEAAKVSGMSSYKIFTRITLPIAIRQALPAYSNE 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++++K +SL   +   ++  +  +I++ T +A+E+ L    IYL L+++++  ++ L  
Sbjct: 158 IISMIKATSLVSTISLMEMTGIADSIVSSTFRALEVFLSAAVIYLILTMLVSKGVSMLER 217

Query: 391 KIA 393
           +++
Sbjct: 218 RLS 220


>gi|292656557|ref|YP_003536454.1| putative glutamine ABC transporter permease [Haloferax volcanii
           DS2]
 gi|291370810|gb|ADE03037.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haloferax volcanii DS2]
          Length = 276

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 54/86 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+   AA++ E VR G+ AVP GQMEAA +LG+ + +  R V++PQA R+ + 
Sbjct: 143 FPTAIIALTLNHAAYVGEAVRGGIGAVPDGQMEAARSLGMGYIQGMREVVVPQAWRNALA 202

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            + +  + L+K++SL   +   +L+ 
Sbjct: 203 AIGNDQVILVKDTSLLTIIAIPELMQ 228


>gi|222106918|ref|YP_002547709.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221738097|gb|ACM38993.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 213

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 18/170 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L+IS F   G+P LV + L Y L           FIG +   P  ++  I LS  TAA+ 
Sbjct: 51  LFISFFR--GVPLLVQLLLIYNL---------LPFIGINV--PSVVAAIIGLSLCTAAYQ 97

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R G  +VP+G +EAA   G + R+    + LP A+R   P L ++ + +LK+SSL 
Sbjct: 98  AENLRGGFESVPKGLIEAADMAGFSGRQTFLRIKLPIALRLTFPALVNEAIMILKSSSLV 157

Query: 342 VAVGFADLVSVGGTIINQTGQAIEII----LIWMFIYLSLSIMIALFMNR 387
             VG  +L  +   +   T   IE+     LI++ I  S++ MIA    R
Sbjct: 158 SVVGIVELTRMAQDLAASTYLPIELFSSAALIYLIICWSVA-MIARITER 206


>gi|163742410|ref|ZP_02149797.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384360|gb|EDQ08742.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 258

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 6/173 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  QF +I  S + P     +    +AL+   A +  E
Sbjct: 88  VIRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGE 145

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R     V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   
Sbjct: 146 VMRGAFSGVAKGQLEAAKAYGMPRLTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVAT 205

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   D+ +V   + + T    E +L+   +Y++++ +I L   R   ++  + 
Sbjct: 206 ITVLDIYAVSSRVRSDTFIVYEPLLLLALVYMAIAGVITLAFKRFEDRVPQRR 258


>gi|240850844|ref|YP_002972244.1| glutamate-aspartate ABC transporter permease component GltK
           [Bartonella grahamii as4aup]
 gi|240267967|gb|ACS51555.1| glutamate-aspartate ABC transporter permease component GltK
           [Bartonella grahamii as4aup]
          Length = 238

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 56/89 (62%), Gaps = 1/89 (1%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+++     S  I  + +  A+ AEI+R+G+ +V +GQ  A  ALG+T+ ++  +V+
Sbjct: 99  FLTGTSIGAN-KSALITFTAFETAYFAEIIRAGINSVSQGQKYAGQALGMTYWQSMYIVI 157

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           LPQA R ++P   +Q + L ++++L  A+
Sbjct: 158 LPQAFRDMLPVFLTQVIILFQDTTLVYAI 186


>gi|312863467|ref|ZP_07723705.1| amino acid ABC transporter, permease protein [Streptococcus
           vestibularis F0396]
 gi|322516240|ref|ZP_08069172.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|311101003|gb|EFQ59208.1| amino acid ABC transporter, permease protein [Streptococcus
           vestibularis F0396]
 gi|322125304|gb|EFX96669.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 226

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 36/208 (17%)

Query: 193 SFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           SF+LG+V+S+         ++LS  + E + +  PLL    FL FGLP + L+     L 
Sbjct: 31  SFLLGLVVSVIRHYRVPVLSQLSTAYIELS-RNTPLLIQLFFLYFGLPRIGLV-----LS 84

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            +   +    F+GGS                   ++AE  RSGL AV + Q E  +++GL
Sbjct: 85  SEACAVVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEVGLSIGL 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQ 362
           T  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   +I    +T  
Sbjct: 126 TPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDV 185

Query: 363 AIEIILI-WMFIYLSLSIMIALFMNRLN 389
           A+ ++++ ++ + L +S++ +    RL 
Sbjct: 186 ALGMLVVAYLLMLLPISLVFSWIERRLR 213


>gi|262404204|ref|ZP_06080759.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. RC586]
 gi|262349236|gb|EEY98374.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. RC586]
          Length = 246

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSSAMSFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             IP   + +L LLK ++L   +G  D+V +       T             Y++++I+ 
Sbjct: 171 HAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFT-------FYMAVAIIF 223

Query: 382 ALFMNRLNAKIALKEKK 398
             F +     + L E+K
Sbjct: 224 LFFTSVSTGLLKLIERK 240


>gi|197294963|ref|YP_002153504.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|254250401|ref|ZP_04943720.1| hypothetical protein BCPG_05293 [Burkholderia cenocepacia PC184]
 gi|124879535|gb|EAY66891.1| hypothetical protein BCPG_05293 [Burkholderia cenocepacia PC184]
 gi|195944442|emb|CAR57044.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 240

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261
           +LSR+   +T + L  LY + F   G+P L++I   Y  +F    L    GQ+    G  
Sbjct: 47  KLSRY---RTLRLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGAEGFI 98

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G+      R +L+PQ +R
Sbjct: 99  GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRSMVLRRILVPQVLR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +   LK+S+L    G A+L+       N T Q     +    +YL ++ + 
Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTGLS 218

Query: 382 ALFMNRLNAKIALKEKK 398
               NR  A +    ++
Sbjct: 219 NRVFNRAEAIVGRSFRR 235


>gi|78067201|ref|YP_369970.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77967946|gb|ABB09326.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 229

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 10/133 (7%)

Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           + T LI G+P LVL+     +L+  L+     LG         + P F++  + L     
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQI----DIDP-FLAGVLVLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K++
Sbjct: 107 AYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKST 166

Query: 339 SLAVAVGFADLVS 351
           +L   +G AD+V 
Sbjct: 167 ALVSIIGLADVVK 179


>gi|327191403|gb|EGE58428.1| octopine ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 234

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA ++G++
Sbjct: 76  LGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT + +E+
Sbjct: 136 GFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195

Query: 367 ILIWMFIYLSLSIMI 381
            L    IYL L+ +I
Sbjct: 196 FLCAAIIYLVLNFII 210


>gi|309777758|ref|ZP_07672707.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914524|gb|EFP60315.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 256

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 14/128 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+  F   G P +V   + Y  H  +P+L       G T+          +S  T A++
Sbjct: 80  LYVWIFR--GTPMMVQALIIY--HGLRPILNWSPVTAGITI----------ISINTGAYM 125

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R+G+ ++ +GQ EAA +LG+T  +    ++LPQA+R+  P + ++++  +K+SS+ 
Sbjct: 126 AEIIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIGNEFIVNIKDSSML 185

Query: 342 VAVGFADL 349
             +G  +L
Sbjct: 186 NVIGVIEL 193


>gi|209546710|ref|YP_002278628.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537954|gb|ACI57888.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 213

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 15/162 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV + L Y L    PV+G  N        P  ++  I LS  TAA+ AE +R G  
Sbjct: 58  GVPLLVELLLIYNLL---PVIG-INV-------PSIVAAIIGLSLCTAAYQAENLRGGFA 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP G +E+A  +GLT R+  R + +P A+R   P L ++ + +LK SSL   VG  +L 
Sbjct: 107 SVPLGLVESAEMVGLTPRQIFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNRL 388
            +   +   T   +++      IYL ++ ++A    L  NRL
Sbjct: 167 RMAQDLAGSTFLPLQLFASAGLIYLVINWLVAHAGVLIENRL 208


>gi|118469776|ref|YP_887059.1| glutamate transporter permease GluD [Mycobacterium smegmatis str.
           MC2 155]
 gi|118171063|gb|ABK71959.1| glutamate transporter permease protein GluD [Mycobacterium
           smegmatis str. MC2 155]
          Length = 299

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 75/121 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ Y  + IAEIVR+G+ ++PRGQ EAA +LGL+  +  R++ LPQA+ +++P L SQ 
Sbjct: 147 GLTLYNGSVIAEIVRAGVHSLPRGQSEAAASLGLSWWQTMRMIQLPQAITAMLPVLVSQL 206

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK++++   + F ++V  G  I +  G  +  +++   + +S++  ++    R+  +
Sbjct: 207 VVVLKDTAIGYQITFVEMVRQGTVIGSSYGNYLPALIVIAVLMISVNFALSALATRIERR 266

Query: 392 I 392
           +
Sbjct: 267 L 267


>gi|325062129|gb|ADY65819.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 230

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           QL F   VL +F       V P F++  +AL    AA+ +E+ R G+ AV  GQ EAA A
Sbjct: 78  QLFFLYYVLPEFGI-----VLPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L LT  +  R +++PQA+  I+P + +  + ++K + +   V   +++ +   I  +T +
Sbjct: 133 LNLTRMQTYRDIIIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFE 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  + +   I+L L+I+ +  ++RL 
Sbjct: 193 YLVPLTLVGLIFLLLTIICSAGLSRLQ 219



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL+G   T   A +G   A I+G +    R S  KL++W   V VE  R+ P LV +FFL
Sbjct: 23  ILIGLTVTLKAAAAGFAIALILGLVFALLRRSRVKLISWPTAVVVEFLRDTPLLVQLFFL 82

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y        +P+  IVLP
Sbjct: 83  YYV------LPEFGIVLP 94


>gi|256825959|ref|YP_003149919.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
 gi|256689352|gb|ACV07154.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
          Length = 215

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + + ++AE  R+G+ +VPRGQ EAA AL L  R+    +++PQA+R+ +P L   
Sbjct: 92  VVMGIHYSTYMAESYRAGIESVPRGQWEAATALSLPARRTWTDLIIPQALRNTLPSLGGW 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K++   + +G  ++V+    +  Q     E + I   I+L  S    L M  L  
Sbjct: 152 AIAMFKDTPFLIVIGVPEMVTAAQRVGAQNFTYTEALTIAGAIFLVASYPTFLLMRYLEK 211

Query: 391 KI 392
           K+
Sbjct: 212 KL 213


>gi|91788992|ref|YP_549944.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698217|gb|ABE45046.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 222

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 15/172 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LY+S   + G P LV +   + ++F  P +G QF+ I             + LS    A+
Sbjct: 59  LYVSC--MRGTPLLVQL---FVIYFGLPSIGIQFDPITAGI---------LGLSLNVGAY 104

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E +R  +  V  GQ  AA +LGLT  +  R V+ PQA+R  +P L++  ++L+K++SL
Sbjct: 105 LSETIRGAINGVEHGQWNAARSLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIKDTSL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L+     +I  T Q   + L    IY ++S        +L  ++
Sbjct: 165 VSVIAVGELMLATKEVIATTFQPFPLYLAAAAIYWAMSASFETLQKKLEVRL 216


>gi|315612441|ref|ZP_07887354.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315315422|gb|EFU63461.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 240

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 9/169 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + + VL  + +LF   L + +  +  ++  L+Y++   I   P ++LI   Y L    
Sbjct: 23  IMIVAMVLSFLPALFLA-LGQIYKVRGVRSFSLVYLA--FIRATPPILLILFFYSLF--P 77

Query: 249 PVLGQF-NFIGGSTVSPEFMSLYIALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +L QF   IG      +   LY A   Y   T    +EI+RS ++ V +GQ+EAA A+G
Sbjct: 78  SLLNQFLKSIGSDLDIFKLDPLYYAFIIYSLMTVGSFSEILRSAILTVDKGQLEAAHAIG 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           LT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++ 
Sbjct: 138 LTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIA 186


>gi|296533326|ref|ZP_06895930.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296266342|gb|EFH12363.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 219

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 73/126 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L    +A++ E+ RSG++AV  G +EAA +LGL+  +    V+LPQA R ++P
Sbjct: 90  FQAGVIGLGVAYSAYMGEVFRSGMLAVDPGAVEAAESLGLSRLRIMTRVILPQATRIVLP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  +  + +LK+SS A  +  A++ +    I + T +  E+  +   +YL+LS+ + + +
Sbjct: 150 PYGNMLIMMLKDSSQASVITVAEISTQSRMIASSTFKNQEVFTLAALLYLALSVPLIILV 209

Query: 386 NRLNAK 391
            RL  +
Sbjct: 210 GRLEKR 215


>gi|283783252|ref|YP_003374006.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|298252813|ref|ZP_06976607.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
 gi|283442213|gb|ADB14679.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|297533177|gb|EFH72061.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS YTAAF+ E +RSGL  VP GQ EA  ALGL   ++   V+LPQ     + PL + +
Sbjct: 99  GLSLYTAAFVCESLRSGLNTVPVGQAEACRALGLNFFQSATQVILPQTFCGSVAPLGNTF 158

Query: 332 LNLLKNSSLAVAVGFADLVS--VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + LLKNS++A A   A   S  +   I       + I LI+   Y+ L I I +    L+
Sbjct: 159 IALLKNSTVAAAASVATETSTMMSEMIEKHADLIVPIFLIFACGYIMLIIPIGILTTYLS 218

Query: 390 AKIALKE 396
            K+A++ 
Sbjct: 219 NKLAVRR 225


>gi|313885604|ref|ZP_07819354.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619334|gb|EFR30773.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 551

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 61/106 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++E++R G+ +V  GQ EAA A+G+ H +    V+LPQA+R+ +P L ++++
Sbjct: 409 VSINTGAYLSEVMRGGITSVDEGQAEAAKAIGMNHFQTMSNVVLPQALRATLPALGNEFV 468

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +K++S+   +   +L     ++   T    +  LI   IY  L+
Sbjct: 469 INIKDTSVLNVIAVTELFFTTKSVAGSTYLTFQTFLITSIIYFVLT 514


>gi|304437586|ref|ZP_07397541.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369399|gb|EFM23069.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 232

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 1/124 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             V P + +++I  +  T A + E  RS L+A+P+GQ+EA    GL+  +    V+LPQA
Sbjct: 97  EAVDPFWYAVFI-FTLNTIALLTEAFRSALLAIPKGQLEAGAVCGLSEAETYLHVILPQA 155

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +   +P + +  +NL+K +SLA  +   D+++VG    +     IE  L    +YL L  
Sbjct: 156 LVVALPSIANITVNLIKGTSLAFLMTVKDIMAVGKVAASYGYNYIEAYLDVFIVYLILCT 215

Query: 380 MIAL 383
           ++ L
Sbjct: 216 IVQL 219


>gi|262191303|ref|ZP_06049496.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae CT 5369-93]
 gi|262032799|gb|EEY51344.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae CT 5369-93]
          Length = 246

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 31/206 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFN-FIGGSTVSPE---- 265
           +  +A+  LY  T +I G+P LVL+ L +   Q+  +   L  FN FI    ++ +    
Sbjct: 45  RWARAIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNG-LSWFNEFINQWLIARDPNHE 101

Query: 266 ---FMSLYIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              ++  Y+ +S + A          A++AE  R  ++AV +G++EAA A G++   + R
Sbjct: 102 WVAYLPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFR 161

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +LLPQ +R  IP   + +L LLK ++L   +G  D+V +       T            
Sbjct: 162 RILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFT------- 214

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
            Y++++I+   F +     + L E+K
Sbjct: 215 FYMAVAIIFLFFTSVSTGLLKLLERK 240


>gi|259908947|ref|YP_002649303.1| arginine transporter permease subunit ArtQ [Erwinia pyrifoliae
           Ep1/96]
 gi|224964569|emb|CAX56082.1| Arginine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283478953|emb|CAY74869.1| Arginine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 238

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 12/186 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           +ALP + +  F+ FG   L+LI        L F + PV  Q + I    VSP F+   IA
Sbjct: 55  RALPEILVVLFIYFGASQLLLILSDGFTINLAFVQIPV--QVS-IENFDVSP-FLCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   +++ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+L
Sbjct: 111 LAILYSSYASQTLRGALQAVPLGQWESGQALGMKKSAVFLRLIVPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   D++    +I  +T +       W  I  ++ ++I LF  ++  +I
Sbjct: 171 VLLKDTALVSLISVNDIMLQTKSIATRTQEP----FTWYVIAAAIYLVITLFSQQVLKRI 226

Query: 393 ALKEKK 398
            L+  +
Sbjct: 227 ELRATR 232


>gi|56962685|ref|YP_174411.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908923|dbj|BAD63450.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 223

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 10/108 (9%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L    P L   NF+ GS          IA+     A+ +E+VR  + ++  GQ EAAI
Sbjct: 73  YALPMIFPGLSMSNFLAGS----------IAVGLNYGAYASEVVRGAIHSIAVGQTEAAI 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +L ++  +  RLV+LPQA+R ++P   +  + LLK +SL   +  AD+
Sbjct: 123 SLNMSKWQRMRLVILPQAVRLMLPGFGNNAIELLKGTSLVYFIALADM 170


>gi|107022252|ref|YP_620579.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116689197|ref|YP_834820.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105892441|gb|ABF75606.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647286|gb|ABK07927.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 229

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 6/189 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269
           H +  +A+   Y  T LI  +P LVL+ L +  +  +  L QF + +G + +  + F++ 
Sbjct: 42  HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLVGWNQIDIDPFVAG 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L     A+  E  R   ++VPRGQ+EA  A G++  +    ++ PQ MR  +P + +
Sbjct: 98  VLTLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMSGARVFVRIMFPQMMRFALPGIGN 157

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  L+K ++L   +G AD+V         T      IL+   IYL+++ +  L + +L 
Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLIQLE 217

Query: 390 AKIALKEKK 398
            + ++  + 
Sbjct: 218 KRYSMGVRH 226


>gi|291007840|ref|ZP_06565813.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 230

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 2/133 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP  ++  + L  + A ++AE+ R+G+  VP GQ EAA AL L  R+    V+LPQ
Sbjct: 92  GIQMSP-LLTGVVGLGLHYATYVAEVYRAGIDGVPAGQWEAATALNLPTRRVWTDVILPQ 150

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+   IP L +  + L K+    VA+   +  +V   +   T +  E I +   +YL+++
Sbjct: 151 AIPRSIPALGNYLIALFKDVPQLVAITVLEPFTVAREVTADTFRPFEAITLAGLLYLAVT 210

Query: 379 IMIALFMNRLNAK 391
           ++++ ++ RL  +
Sbjct: 211 LVMS-YLGRLAER 222


>gi|118592148|ref|ZP_01549541.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
 gi|118435120|gb|EAV41768.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
          Length = 244

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 53/95 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IA+S +  A  A+I+R+GL +V  GQ EAA A      K   L++LPQAM  IIP
Sbjct: 84  FWSACIAISVWGGANGAQILRAGLNSVGNGQREAAAAFNFGPAKTLLLIVLPQAMPVIIP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P       +++ +SL   VG  +L+  G  +I QT
Sbjct: 144 PYVGLMTAVVQATSLGAVVGAQELLRSGQILIEQT 178


>gi|297243523|ref|ZP_06927455.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
 gi|296888568|gb|EFH27308.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
          Length = 175

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 2/127 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS YTAAF+ E +RSGL  VP GQ EA  ALGL   ++   V+LPQ     + PL + +
Sbjct: 49  GLSLYTAAFVCESLRSGLNTVPVGQAEACRALGLNFFQSATQVILPQTFCGSVAPLGNTF 108

Query: 332 LNLLKNSSLAVAVGFADLVS--VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + LLKNS++A A   A   S  +   I       + I LI+   Y+ L I I +    L+
Sbjct: 109 IALLKNSTVAAAASVATETSTMMSEMIEKHADLIVPIFLIFACGYIMLIIPIGILTTYLS 168

Query: 390 AKIALKE 396
            K+A++ 
Sbjct: 169 NKLAVRR 175


>gi|312958426|ref|ZP_07772946.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311286969|gb|EFQ65530.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 240

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 2/129 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAMRSII 324
           F +  IAL     A+  E++R  +I++P+G  EA +ALGL+  R  TRL+ +PQ  R  +
Sbjct: 106 FAAGVIALGLCFGAYATEVLRGAIISIPKGHREAGVALGLSKVRIFTRLI-MPQMWRIAL 164

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L + +L L+K+++L   +G  +++      +  T Q     ++   IYL L+ +  + 
Sbjct: 165 PGLGNLFLILMKDTALVTVIGLEEIMRHAQIAVTVTKQPFTFYMVAALIYLGLTSLSMVA 224

Query: 385 MNRLNAKIA 393
           M+ L  + A
Sbjct: 225 MHFLEKRAA 233


>gi|254781113|ref|YP_003065526.1| amino acid ABC transporter (permease) [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040790|gb|ACT57586.1| amino acid ABC transporter (permease) [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 226

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 112/217 (51%), Gaps = 40/217 (18%)

Query: 177 SFPTL-------TMDTNAKIFVFSFVLGIVLSLFATRLSR-------HFHEKTGKALPLL 222
           SFP L       T+      FV S ++G  +++     S        HF+    +  PLL
Sbjct: 12  SFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLL 71

Query: 223 YISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +  F+IF GLP + ++       FD                  F+++ I+L+   +A+I
Sbjct: 72  -VQLFVIFYGLPHIGIV-------FDS-----------------FVAIIISLTLNFSAYI 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+RS +I++P+GQ +A+ A+GLT ++  R ++LPQ + +   PL+S+++++LK++S+A
Sbjct: 107 SEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +   ++      I++ T Q + I     F+YL L+
Sbjct: 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILT 203


>gi|152986551|ref|YP_001345801.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150961709|gb|ABR83734.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 230

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 26/208 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG+VL  F+  + R         +  +Y+S F   G P LV I   + L++  P +G
Sbjct: 39  SMVLGLVLG-FSVAVVRVTKVPLVSQIAAVYVSAF--RGTPLLVQI---FVLYYGLPSVG 92

Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +F  +             +AL+   AA+++E +R  ++ + +GQ EA +++GLT  +  
Sbjct: 93  IEFTPVTAGI---------LALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTL 143

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++ PQA+R  +P L++  ++L+K++SL   +   +L+     +I +T Q + + L   
Sbjct: 144 WNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAA 203

Query: 372 FIYLSLSIMIALF-------MNRLNAKI 392
            IY  LS   ALF        NRL A +
Sbjct: 204 GIYWLLS---ALFERVQKALENRLTAPL 228


>gi|92114900|ref|YP_574828.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91797990|gb|ABE60129.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 238

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 28/202 (13%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--------------QLHFDKP 249
           + +LSRH   +    +  LY  T LI G+P LVL+ L +                 FD  
Sbjct: 38  SAKLSRH---RLLHRIATLY--TTLIRGVPDLVLMLLLFFGGQMGVNAITDWLYYQFDVD 92

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +    N         EF++  + +     A++ E  R   +AV  GQ+EA  A G++ R 
Sbjct: 93  IFININ---------EFVAGVVTIGFIFGAYMGETFRGAFLAVDSGQLEAGRAYGMSSRL 143

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +  PQ MR  +P L + ++ LLK ++L   +G +D+V +       T +    ++ 
Sbjct: 144 IFRRIQFPQMMRHALPGLGNNWMVLLKTTALVSVIGLSDMVRIAAEATKATHEPFLFMIP 203

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
              IYL ++ +    + RL  +
Sbjct: 204 VAVIYLLIASVSEWGVARLQKR 225


>gi|49474413|ref|YP_032455.1| amino acid permease [Bartonella quintana str. Toulouse]
 gi|49239917|emb|CAF26315.1| Amino acid permease [Bartonella quintana str. Toulouse]
          Length = 238

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 1/139 (0%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+ G+++     +L I  + + AA+ AEI+R+G+ +V +GQ  A  ALG+T+ +   +V+
Sbjct: 99  FLTGTSIGVNKSAL-ITFTAFEAAYFAEIMRAGINSVSQGQKHAGQALGMTYWQNMYIVI 157

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA R ++P   +Q + L ++++L  A+    L++    + N  G   E  ++    Y 
Sbjct: 158 LPQAFRDMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIVANNFGVKQEAYILAAIFYF 217

Query: 376 SLSIMIALFMNRLNAKIAL 394
            +   ++  +  L  KI++
Sbjct: 218 VICFTLSQIVLYLQKKISI 236



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + + +L     I   I GTL+   RLS+ KL++W+  +Y+   R+IP ++VI + 
Sbjct: 34  ILSGLLFSVFLTLFATILGLIFGTLLAMMRLSSMKLLSWLAVIYIIAMRSIPLVMVILWF 93

Query: 149 Y 149
           +
Sbjct: 94  F 94


>gi|328463781|gb|EGF35338.1| amino acid ABC transporter permease [Lactobacillus helveticus MTCC
           5463]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 27/193 (13%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263
           R    K  + +  +Y+  F I  LP++VL+ L Y      LH + P         G+ ++
Sbjct: 47  RTMPNKIIRCILRVYMEIFRI--LPSVVLLYLVYYILPRSLHINWP---------GTWMA 95

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  +A S + AA  ++IVR  L +VP  Q E+ +ALGL+  +    VLLPQA +  
Sbjct: 96  ------VLAFSLWVAAEFSDIVRGALQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLE 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYLSLS 378
           +P   +    ++K +S+ + +   D+++VG  II    Q     + W+     F Y  L 
Sbjct: 150 LPATINLATRVIKTTSILMLISVMDVINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILD 209

Query: 379 IMIALFMNRLNAK 391
             ++++   L AK
Sbjct: 210 YPLSVWAKSLMAK 222



 Score = 45.4 bits (106), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   + W+A   +    +IGT+ G  R   NK++  I RVY+E+FR +P +V+++ +
Sbjct: 18  LLVGLWTSIWIAALSIFIGLLIGTVFGVLRTMPNKIIRCILRVYMEIFRILPSVVLLYLV 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|325697575|gb|EGD39460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 73/144 (50%), Gaps = 16/144 (11%)

Query: 232 LPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +P LVL+ L Y     +FD  + G+             +S  I  S +  A + ++VR  
Sbjct: 68  MPQLVLLFLVYFGLARNFDINISGE-------------LSAIIVFSLWGTAEMGDLVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P+ Q E+  ALGL+ R+    +++PQ +R ++P   +    ++K +SL V +G  +
Sbjct: 115 ITSLPKHQFESGQALGLSQRQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIE 174

Query: 349 LVSVGGTIINQTGQAIEIILIWMF 372
           +V VG  II+    +I     W++
Sbjct: 175 VVKVGQQIIDSNRLSIPSAAFWIY 198


>gi|294674316|ref|YP_003574932.1| amino acid ABC transporter ATP-binding protein/permease [Prevotella
           ruminicola 23]
 gi|294473716|gb|ADE83105.1| amino acid ABC transporter, ATP-binding protein/permease protein,
           His/Glu/Gln/Arg/opine family [Prevotella ruminicola 23]
          Length = 911

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 17/183 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R++RH   K  + +   YI   L+ G P LVL+ L Y +     ++   +  G       
Sbjct: 58  RMNRH---KWLRHIASAYID--LMRGTPVLVLLMLMYYV-----LMAPIDATG------- 100

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   +  +  TAA+I+E++R+ +  + RGQ EA +ALG T R+    ++LPQ +++++P
Sbjct: 101 IVVAIVTFALNTAAYISEMLRTSIQGIDRGQTEAGLALGYTQRQTFIRIILPQVVKAVMP 160

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
               + ++LLK +S+   +   D+      I ++T  A   +++   IY  ++ +I   +
Sbjct: 161 VYQGEVISLLKGTSIVGYIAVNDMTRASDLIRSRTFDAFFPLIVTAIIYFLIAWLIGQLL 220

Query: 386 NRL 388
             L
Sbjct: 221 TAL 223


>gi|15890240|ref|NP_355912.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158430|gb|AAK88697.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 230

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           QL F   VL +F       V P F++  +AL    AA+ +E+ R G+ AV  GQ EAA A
Sbjct: 78  QLFFLYYVLPEFGI-----VLPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L LT  +  R +++PQA+  I+P + +  + ++K + +   V   +++ +   I  +T +
Sbjct: 133 LNLTRMQTYRDIIIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFE 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  + +   I+L L+I+ +  ++RL 
Sbjct: 193 YLVPLTLVGLIFLLLTIICSAGLSRLQ 219



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 6/78 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL+G   T   A +G   A ++G +    R S  KL++W   V VE  R+ P LV +FFL
Sbjct: 23  ILIGLTVTLKAAAAGFAIALVLGLVFALLRRSRVKLISWPTAVVVEFLRDTPLLVQLFFL 82

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y        +P+  IVLP
Sbjct: 83  YYV------LPEFGIVLP 94


>gi|327394608|dbj|BAK12030.1| histidine transport system permease protein HisQ [Pantoea ananatis
           AJ13355]
          Length = 228

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 26/208 (12%)

Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALK-YQLHF-- 246
           S +L ++L L     +LSR+      + L L++   T LI G+P LVL+ L  Y L    
Sbjct: 23  SVLLAVILGLIGAGAKLSRN------RLLSLIFEGYTTLIRGVPDLVLMLLIFYGLQIAL 76

Query: 247 ----DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
               D   L QF+      + P    + I L     A+  E  R   +AVP+GQ+EAA A
Sbjct: 77  NHLTDALGLAQFD------IDPMVAGI-ITLGFIYGAYFTETFRGAFMAVPKGQIEAATA 129

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q
Sbjct: 130 FGFTGSQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQ 189

Query: 363 AIEIILIWMFIYL---SLSIMIALFMNR 387
                ++   IYL   +LS  I  ++NR
Sbjct: 190 PFYFAIVAGVIYLVFTTLSNGILWWLNR 217



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            Y+  IL G + T  LA S ++ A I+G L+GAG +LS N+L++ I   Y  + R +P L
Sbjct: 4   GYSDVILKGTLVTLELALSSVLLAVILG-LIGAGAKLSRNRLLSLIFEGYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|317053831|ref|YP_004117856.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951826|gb|ADU71300.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 245

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 1/120 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+S  F +  +AL     A+++E  R+G+ +VP+GQ+EAA  LG+  R+    V+LPQ
Sbjct: 82  GITMS-AFTAGVLALGINVGAYLSETFRAGIQSVPKGQLEAAWILGIPRRQVFLSVVLPQ 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R++ P + +  + LL  +SL  A+   +L      I  +T   I+   +   +YL LS
Sbjct: 141 AARAVWPAIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALVYLLLS 200


>gi|10954822|ref|NP_053242.1| hypothetical protein pTi-SAKURA_p003 [Agrobacterium tumefaciens]
 gi|16119837|ref|NP_396542.1| ABC transporter, membrane spanning protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
 gi|548381|sp|P35113|NOCM_AGRT5 RecName: Full=Nopaline transport system permease protein nocM
 gi|154755|gb|AAA50513.1| transport protein [Agrobacterium tumefaciens]
 gi|6498175|dbj|BAA87627.1| tiorf2 [Agrobacterium tumefaciens]
 gi|15163491|gb|AAK90983.1| ABC transporter, membrane spanning protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
          Length = 241

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 110/210 (52%), Gaps = 10/210 (4%)

Query: 177 SFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP L   + T   +   S ++G V+S+    L R    +   +L   Y+  ++I   P 
Sbjct: 9   SFPKLLAAVPTTLTLAFISLLIGFVVSV-PVALMRLSKNRIVSSLAYGYV--YIIRSTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           LV + L Y  +      G  + +G   S   P F ++ +AL+  TAA+ +EI+R G+ +V
Sbjct: 66  LVQMFLIY--YGSAQFRGVLSEVGLWSSFREPWFCAI-LALALNTAAYTSEIIRGGIQSV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ+EAA A+G++     R ++ P A+R  +P   ++ + ++K++SLA  +   ++  +
Sbjct: 123 SLGQIEAARAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGL 182

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
              II+ T   +E+ ++   IYL ++ +++
Sbjct: 183 AKQIISATYSPVEVFIVAGAIYLFITFVVS 212


>gi|150017368|ref|YP_001309622.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149903833|gb|ABR34666.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 221

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 24/177 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L      +++      +    F+GGS                   
Sbjct: 66  PLLVQIFFLYFGLPKL-----GFKMGEATCAIIGLAFLGGS------------------- 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE  RSG+ AV + Q+E+ I++GL+  +  R V++PQA    +P +++  + LLK +S
Sbjct: 102 YMAEAFRSGVEAVSKTQIESGISIGLSKGQLIRYVIIPQAFSVSMPSISANCIFLLKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  A+   DL ++   +I    +  E + + + IYL + + ++  M+ +  K+   E
Sbjct: 162 VLGAISIMDLTNLTKDLIGMYYRTFESLSLLVLIYLIMILPLSFLMSWIERKVRYAE 218


>gi|315605386|ref|ZP_07880429.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312955|gb|EFU61029.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 219

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 4/105 (3%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AE +RSGL ++   Q E+A ALGLT  +  R V LPQA+ + +PPL +  + L+K +
Sbjct: 99  AYMAEALRSGLDSIATIQWESASALGLTPAQTLRHVALPQAIATSVPPLAANVIFLIKET 158

Query: 339 SLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSI 379
           S+   V   DLV V   +I     T +A+ +++I ++ I L +SI
Sbjct: 159 SVVSVVALPDLVYVAKDLIGMSYNTSEALALLIIAYLVILLPVSI 203


>gi|260555374|ref|ZP_05827595.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii ATCC 19606]
 gi|260411916|gb|EEX05213.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii ATCC 19606]
          Length = 221

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 70/119 (58%), Gaps = 3/119 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++
Sbjct: 99  WGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAKI 392
           K SSLAV +G  +++ VG  II  +   +    +W+  FI++ L  +I   ++RL A +
Sbjct: 159 KTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAHL 216



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  R 
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKSLCRLYLEAIRI 64

Query: 139 IPPLVVIFFLY 149
           IP LV++F  Y
Sbjct: 65  IPILVLLFVFY 75


>gi|197105460|ref|YP_002130837.1| cystine ABC tranporter, permease protein [Phenylobacterium zucineum
           HLK1]
 gi|196478880|gb|ACG78408.1| cystine ABC tranporter, permease protein [Phenylobacterium zucineum
           HLK1]
          Length = 217

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 70/125 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    + + AE  R+G+ +V    +EAA +LG++     R V+LP A+R+ +PP  + 
Sbjct: 93  IGLGVAYSVYQAENFRAGIQSVDPALVEAARSLGMSEGMIMRRVILPLAIRTALPPFGNT 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK+SS+A  +  A+L   G  +   T Q + +  +   +YL++S+ +   ++RL  
Sbjct: 153 SIMLLKDSSIASTITVAELTRAGQLLAISTFQNMTVYTLIALLYLAMSLPLTFLVHRLEK 212

Query: 391 KIALK 395
           ++A +
Sbjct: 213 RMARR 217


>gi|169796307|ref|YP_001714100.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|213156957|ref|YP_002319002.1| ArtM protein [Acinetobacter baumannii AB0057]
 gi|215483766|ref|YP_002325991.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|294837740|ref|ZP_06782423.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013113]
 gi|294859373|ref|ZP_06797142.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013150]
 gi|301344838|ref|ZP_07225579.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB056]
 gi|301510865|ref|ZP_07236102.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB058]
 gi|301596927|ref|ZP_07241935.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB059]
 gi|169149234|emb|CAM87116.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213056117|gb|ACJ41019.1| ArtM protein [Acinetobacter baumannii AB0057]
 gi|213986272|gb|ACJ56571.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
          Length = 221

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 70/119 (58%), Gaps = 3/119 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++
Sbjct: 99  WGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAKI 392
           K SSLAV +G  +++ VG  II  +   +    +W+  FI++ L  +I   ++RL A +
Sbjct: 159 KTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFI-LYFLICYPLSRLAAHL 216



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  R 
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKSLCRLYLEAIRI 64

Query: 139 IPPLVVIFFLY 149
           IP LV++F  Y
Sbjct: 65  IPILVLLFVFY 75


>gi|85707347|ref|ZP_01038430.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. 217]
 gi|85668155|gb|EAQ23033.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. 217]
          Length = 217

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS YT+A+ AEIVR G+ AVP     AA +LGLT  +  R ++LP A R  +P     
Sbjct: 93  IVLSLYTSAYCAEIVRGGIDAVPEITRRAARSLGLTWGQDMRYIVLPLATRVALPSWIGL 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L ++K+S+L   V   +L+     +I +  + + ++LI    Y  +S  +A F   L  
Sbjct: 153 ALGVMKDSALVYVVQVTELLKSTQILITRLQEPLFLLLICGAFYFIISFPLARFGGYLEK 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|300311471|ref|YP_003775563.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300074256|gb|ADJ63655.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 221

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 70/123 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS   +A+++E +R  ++ V RGQ  AA ++GLT+ +  R +++PQA+R  +P +++ 
Sbjct: 94  LTLSLNASAYLSESLRGAILGVTRGQWNAAFSVGLTYFQTLRYIIVPQAVRIAVPSMSNT 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     +I  T + + + +    IY  LS+      +RL  
Sbjct: 154 LISLIKDTSLVSVITVTELMLATKEVIAVTFRPLPLYVAAAAIYWMLSLCFEALQHRLEK 213

Query: 391 KIA 393
           K+ 
Sbjct: 214 KLG 216


>gi|296271868|ref|YP_003654499.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096043|gb|ADG91993.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 219

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 56/95 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS Y AA+ AEI RSG  ++P+G +EAA  LG + ++  R + LP+ +  I+PP  + 
Sbjct: 91  LGLSLYGAAYFAEIFRSGFESIPKGHIEAAYDLGYSRQQILRYIQLPEMLGLILPPSINL 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + L+K S++   +  ++L +   T+  +T   +E
Sbjct: 151 TIILIKESAILSIITVSELTTAAVTMGTETFSMVE 185


>gi|227113606|ref|ZP_03827262.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 221

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 24/155 (15%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP+L L          K   GQ             +++ I L  Y+     EI+R
Sbjct: 75  FIVFGLPSLGL----------KLTAGQ----------AALLAMLINLGAYST----EIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+   P+GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V +
Sbjct: 111 AGIQVTPKGQWEAARVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSY 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++T  + E+ L     YL LS+++
Sbjct: 171 EELTFAANLIQSRTFLSFEVYLATTLCYLVLSVLM 205


>gi|291457061|ref|ZP_06596451.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Bifidobacterium
           breve DSM 20213]
 gi|291380896|gb|EFE88414.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Bifidobacterium
           breve DSM 20213]
          Length = 262

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 68/130 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  +AL     A+I ++V S + A+  GQ+EA  A G+  R+    +LLPQ +   
Sbjct: 99  PYFPAAVLALGLNFGAYITDVVVSSVRAIDHGQIEAGKACGMRRREIIWHILLPQVVVVS 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP + + ++ LLK +S+A  VG A+L+       +Q    +E  L+   +Y  + ++   
Sbjct: 159 IPDMGNYFIWLLKGTSVASLVGVAELLGTAKISASQNYDFLEAYLVAALLYWVVCVVAEW 218

Query: 384 FMNRLNAKIA 393
            +N L A++ 
Sbjct: 219 LLNLLYARLG 228


>gi|126665670|ref|ZP_01736651.1| ABC-type arginine/histidine transport system, permease component
           [Marinobacter sp. ELB17]
 gi|126629604|gb|EBA00221.1| ABC-type arginine/histidine transport system, permease component
           [Marinobacter sp. ELB17]
          Length = 240

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 2/176 (1%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +++ T+L  G P L+ + + Y      P + Q  F       P + +L +A +  TAA+ 
Sbjct: 63  IWVYTYLFRGTPLLIQLYIIYYGIAQIPGI-QETFWWNIFREPFYPAL-LAFTLNTAAYT 120

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+R  +IA P G++EAA A G++     R ++LP A R  +   +++ + +L  S++A
Sbjct: 121 TEIIRGAIIATPMGEIEAAKAYGMSWMLRMRRIILPNAARRAVQAYSNEVIFMLHASAIA 180

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             V   DL      I  +T    +  +    IYL L+ ++     +L   +   ++
Sbjct: 181 SVVTMVDLTGAARNIYARTYAPFDAFIFVALIYLMLTFILVFVFRKLENHLLRHQR 236


>gi|170732878|ref|YP_001764825.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169816120|gb|ACA90703.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 230

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 25/233 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224
           S P L        K  V S V G    +VL++   R S     F      AL  L   Y+
Sbjct: 10  SLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYV 69

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 70  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     +I  T Q + + L    +Y  L  ++         +++L  +
Sbjct: 177 TVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPSR 229


>gi|260768890|ref|ZP_05877824.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           furnissii CIP 102972]
 gi|260616920|gb|EEX42105.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           furnissii CIP 102972]
          Length = 246

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 8/137 (5%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++   A R +LLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMSAALAFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   + +L LLK ++L   +G  D+V +       T             Y+++SI+ 
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKMPFT-------FYMAVSIIF 223

Query: 382 ALFMNRLNAKIALKEKK 398
            LF +     + + E+K
Sbjct: 224 LLFTSVSTGLLKIVERK 240


>gi|253689674|ref|YP_003018864.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756252|gb|ACT14328.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 221

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 24/155 (15%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP+L      ++L   +  L               +++ I L  Y+     EI+R
Sbjct: 75  FIVFGLPSL-----GWKLTAGQAAL---------------LAMLINLGAYST----EIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+   P+GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V +
Sbjct: 111 AGIQVTPKGQWEAARVLGLTRVQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSY 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++T  + E+ L     YL+LS+++
Sbjct: 171 EELTFAANLIQSRTFLSFEVYLATTLCYLALSVLM 205


>gi|228476994|ref|ZP_04061632.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|228251013|gb|EEK10184.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
          Length = 226

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 36/208 (17%)

Query: 193 SFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           SF+LG+V+S+         ++LS  + E + +  PLL    FL FGLP + L+     L 
Sbjct: 31  SFLLGLVVSVIRHYRVPILSQLSTAYIELS-RNTPLLIQLFFLYFGLPRIGLV-----LS 84

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            +   +    F+GGS                   ++AE  RSGL AV + Q E  +++GL
Sbjct: 85  SEACAVVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEVGLSIGL 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQ 362
           T  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   +I    +T  
Sbjct: 126 TPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDV 185

Query: 363 AIEIILI-WMFIYLSLSIMIALFMNRLN 389
           A+ ++++ ++ + L +S++ +    RL 
Sbjct: 186 ALGMLVVAYLLMLLPISLVFSWIERRLR 213


>gi|254466546|ref|ZP_05079957.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
 gi|206687454|gb|EDZ47936.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
          Length = 235

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 1/129 (0%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP F +  +AL     AF AE++R    ++  GQ EA  A+G+T R+    + LPQ  R 
Sbjct: 100 SP-FAAGVVALGMVFGAFAAEVLRGAFQSLDSGQAEAGRAIGMTARQIFLRIRLPQVWRF 158

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L + ++N+LK+++L   +   DL+ +    +  T Q     L+   IY +L ++  
Sbjct: 159 ALPGLGNLWINMLKDTALVSVIALDDLMRMTKVAVGVTKQPFTFYLLACLIYWALCVLSE 218

Query: 383 LFMNRLNAK 391
           L + ++  +
Sbjct: 219 LVLAQMERR 227


>gi|123441812|ref|YP_001005796.1| arginine transporter permease subunit ArtQ [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088773|emb|CAL11579.1| arginine transport system permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 238

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHF----HEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V +  LG+VL+ LFA   S  +    +  TG     + LP + +  F+ FG   L+++  
Sbjct: 19  VCALALGLVLAMLFAVCESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78

Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L+ F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPVGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYVIAAAIYLVVTLL 218


>gi|327183918|gb|AEA32365.1| amino acid ABC transporter permease [Lactobacillus amylovorus GRL
           1118]
          Length = 224

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 27/193 (13%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263
           R    K  + +  +Y+  F I  LP++VL+ L Y      LH + P         G+ ++
Sbjct: 47  RTMPNKIIRCILRVYMEIFRI--LPSVVLLYLVYYILPRSLHINWP---------GTWMA 95

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  +A S + AA  ++IVR  L +VP  Q E+ +ALGL+  +    VLLPQA +  
Sbjct: 96  ------VLAFSLWVAAEFSDIVRGALQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLE 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYLSLS 378
           +P   +    ++K +S+ + +   D+++VG  II    Q     + W+     F Y  L 
Sbjct: 150 LPATINLATRVIKTTSILMLISVMDVINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILD 209

Query: 379 IMIALFMNRLNAK 391
             ++++   L AK
Sbjct: 210 YPLSVWAKSLMAK 222



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 39/61 (63%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   + W+A   +I   +IGT+ G  R   NK++  I RVY+E+FR +P +V+++ +
Sbjct: 18  LLVGLWTSIWIAALSIIIGLLIGTIFGVLRTMPNKIIRCILRVYMEIFRILPSVVLLYLV 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|162448163|ref|YP_001621295.1| ABC transporter permease [Acholeplasma laidlawii PG-8A]
 gi|161986270|gb|ABX81919.1| ABC-type transport system, permease component [Acholeplasma
           laidlawii PG-8A]
          Length = 218

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 22/175 (12%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+++GLP L   A      FD+     F FI                  Y
Sbjct: 58  RGTPLLLQLFFVVYGLPILFGPAFL----FDELYGAIFTFIIN----------------Y 97

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TA FI EI R G+ A+ +GQ +A+ A+ L+  +  R ++LPQ +   +P + ++ + L+K
Sbjct: 98  TAYFI-EIFRGGMNAIHKGQYDASKAIHLSPYQTYRHIILPQTLHKTLPSIGNELITLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++L  AV  +D++     ++N+  + +E  ++   IYL  + +I +   ++  +
Sbjct: 157 DTALVSAVSISDILRNSRELVNRDFR-VESYMVAAVIYLLFTYVIVMLFKKIETR 210


>gi|114769150|ref|ZP_01446776.1| amino acid ABC transporter protein, permease protein [alpha
           proteobacterium HTCC2255]
 gi|114550067|gb|EAU52948.1| amino acid ABC transporter protein, permease protein [alpha
           proteobacterium HTCC2255]
          Length = 218

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 20/202 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKP 249
           V ++VLG+V+++   ++S +      KA+  + Y S+  I   P LV      QL+F   
Sbjct: 31  VLAYVLGLVIAIL--KMSGN------KAVAFITYWSSEFIRRTPLLV------QLYFLFY 76

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           VL  F    G  +SP F++  I L  + + + +E+ R+G+  VP+GQ EAA +L  +   
Sbjct: 77  VLPDF----GIFLSP-FVAGVIGLGLHFSTYTSEVYRAGIENVPKGQWEAARSLNYSAYH 131

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA+  + PPL +  + + K + L  A+   +L +      N   + +E + +
Sbjct: 132 TWRFVILPQAIPPMFPPLANYLITMFKETPLLSAITVVELFNAANIYSNSHYKYLEPMTL 191

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
               +L +SI  A+   ++  K
Sbjct: 192 VGLFFLLVSIPAAMIALKIENK 213


>gi|107028496|ref|YP_625591.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686492|ref|YP_839739.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105897660|gb|ABF80618.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652207|gb|ABK12846.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 240

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 12/197 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGST 261
           +LSR+   +T + L  LY + F   G+P L++I   Y  +F    L    GQ+    G  
Sbjct: 47  KLSRY---RTLRLLGDLYTTVFR--GVPELLVI---YLFYFGGSTLVTAVGQWFGAEGFI 98

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G+      R +L+PQ +R
Sbjct: 99  GVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIGMPRSMVLRRILVPQVLR 158

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + + +   LK+S+L    G A+L+       N T Q     +    +YL ++ + 
Sbjct: 159 FALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTGLS 218

Query: 382 ALFMNRLNAKIALKEKK 398
               NR  A +    ++
Sbjct: 219 NRVFNRAEAIVGRSFRR 235


>gi|329296933|ref|ZP_08254269.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 199

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 63/114 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+  +PRGQ EA   LGL+  +    V+LP +++ I P L SQ + ++  
Sbjct: 79  GAYSTEIIRAGIQVMPRGQWEAGRVLGLSRTQTFIRVVLPPSLQRIYPALISQCIIVMLG 138

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SS+   V + +L      I ++T  + E+ L+   IYL+LSI +   +  L  K
Sbjct: 139 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSIAMRQLLLTLGRK 192


>gi|291618214|ref|YP_003520956.1| HisQ [Pantoea ananatis LMG 20103]
 gi|291153244|gb|ADD77828.1| HisQ [Pantoea ananatis LMG 20103]
          Length = 228

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 22/206 (10%)

Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLI-----ALKYQL 244
           S +L ++L L     +LSR+      + L L++   T LI G+P LVL+      L+  L
Sbjct: 23  SVLLAVILGLIGAGAKLSRN------RLLSLIFEGYTTLIRGVPDLVLMLLIFYGLQIAL 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +     LG   F     + P    + I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 77  NHLTDALGLTQF----DIDPMVAGI-ITLGFIYGAYFTETFRGAFMAVPKGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTGSQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYL---SLSIMIALFMNR 387
              ++   IYL   +LS  I  ++NR
Sbjct: 192 YFAIVAGVIYLVFTTLSNGILWWLNR 217



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 2/67 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            Y+  IL G + T  LA S ++ A I+G L+GAG +LS N+L++ I   Y  + R +P L
Sbjct: 4   GYSDVILKGTLVTLELALSSVLLAVILG-LIGAGAKLSRNRLLSLIFEGYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|237752283|ref|ZP_04582763.1| ArtM protein [Helicobacter winghamensis ATCC BAA-430]
 gi|229375772|gb|EEO25863.1| ArtM protein [Helicobacter winghamensis ATCC BAA-430]
          Length = 217

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 69/127 (54%), Gaps = 5/127 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S +  A + ++VR  + ++P+ Q ++A ALGL   +    V+ PQ+ + ++P L + 
Sbjct: 90  LAFSLWGIAEMGDLVRGAISSLPKHQEQSARALGLKEWQVQVFVVFPQSFKRLLPSLVNL 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYLSLSIMIALFM 385
           +  ++K +SLA  +G +D++ VG  II     +      W+     F+Y +L   +++F 
Sbjct: 150 FTRMIKTTSLAALIGVSDMLKVGQQIIEVNLISYPTASFWVYGGIFFVYFALCYPLSVFS 209

Query: 386 NRLNAKI 392
           + L  K+
Sbjct: 210 HYLEKKL 216


>gi|254393590|ref|ZP_05008722.1| amino acid ABC transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294812811|ref|ZP_06771454.1| Putative polar amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326441239|ref|ZP_08215973.1| amino acid ABC transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197707209|gb|EDY53021.1| amino acid ABC transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294325410|gb|EFG07053.1| Putative polar amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 216

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 54/95 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  + + + AE+ R+G+  VP GQ EAA AL L+ R+    V+LPQA+R + P L + 
Sbjct: 93  LGLGLHYSTYTAEVYRAGIDGVPEGQWEAATALNLSRRRTWSGVILPQALRRVAPALGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + +LK++ +   +G  +++       ++T   +E
Sbjct: 153 VIAMLKDTPMLFVIGVMEMLGAARQFSSETFLTVE 187


>gi|94500102|ref|ZP_01306636.1| ABC-type arginine/histidine transport system, permease component
           [Oceanobacter sp. RED65]
 gi|94427675|gb|EAT12651.1| ABC-type arginine/histidine transport system, permease component
           [Oceanobacter sp. RED65]
          Length = 237

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +  TAA+  EI R  +    +G++EAA A G++  K  + ++LP A R  IP  T++
Sbjct: 109 IAFALNTAAYTTEIFRGAIETTSKGEIEAARAYGMSWSKCMKRIVLPSAFRRAIPAYTNE 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  S++A  V   DL      I  +     E  L    IYL L+  I +   +L  
Sbjct: 169 VIFMLHASAIASTVTIIDLTGAARDIYARFYAPFEAFLFVAAIYLCLTFSIIMLFKQLEK 228

Query: 391 KI 392
           ++
Sbjct: 229 RL 230


>gi|296390363|ref|ZP_06879838.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|313106243|ref|ZP_07792492.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|310878994|gb|EFQ37588.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 221

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 9/143 (6%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L+F    LG F    G  VS  F +L   ++   A ++AE  R GL AVP  Q+ AA 
Sbjct: 75  YILYFG---LGSF----GLHVSSWF-ALLAGVTFNNAGYLAETFRGGLQAVPETQLRAAR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQT 360
           +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL V VG   DL  V   +  +T
Sbjct: 127 SLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTNDLTGVTQALNVKT 186

Query: 361 GQAIEIILIWMFIYLSLSIMIAL 383
            +  E   +   +Y +++ ++ L
Sbjct: 187 FRTFEYFALAAVLYFAMAKLLVL 209


>gi|254453112|ref|ZP_05066549.1| ABC transporter, membrane spanning protein [Octadecabacter
           antarcticus 238]
 gi|198267518|gb|EDY91788.1| ABC transporter, membrane spanning protein [Octadecabacter
           antarcticus 238]
          Length = 215

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 72/129 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++  A + + +AF+ +I R  + ++PRGQ EA+ ALG+ +    R ++LPQA++  +P
Sbjct: 85  WVAVSFAFTAHASAFLGDIWRGTIQSLPRGQTEASNALGIGYISRMRDIILPQAIKISLP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L K +SLA  VGF +L   G  + N   Q + +  I   IY  +   ++++ 
Sbjct: 145 ATIGFAVQLTKGTSLAAIVGFVELARAGQIVSNLIFQPLLVYGIVGVIYFFVCWPMSIWG 204

Query: 386 NRLNAKIAL 394
           + +  K++L
Sbjct: 205 SAMERKLSL 213


>gi|107029119|ref|YP_626214.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686987|ref|YP_840234.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105898283|gb|ABF81241.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652702|gb|ABK13341.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 222

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 2/139 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+SP F ++ I  +    A++ EI R+G  +V R ++EAA  LG +  +  R V+ P 
Sbjct: 82  GVTLSP-FSAVLIGATFNAGAYLCEIQRAGFASVRRAEIEAAEVLGFSTAQIVRYVIFPH 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            ++ + PPL++Q++ +   +S+A   G  +L      + +QT  +IE   +   +Y++++
Sbjct: 141 VLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTFNLSSQTYLSIEAFSVAAVMYIAIT 200

Query: 379 IMIALFMNRLNAKIALKEK 397
            +IA F      + A + K
Sbjct: 201 -LIATFALAAFGRYACRAK 218


>gi|308234143|ref|ZP_07664880.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Atopobium vaginae DSM 15829]
 gi|328943632|ref|ZP_08241097.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
 gi|327491601|gb|EGF23375.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
          Length = 219

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 32/225 (14%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           T+TM      +V + +LG ++S+      +  RL+   +    + +P + +   +++ LP
Sbjct: 19  TVTMKMALISYVSATLLGCIVSIMRISPIYPLRLTGDAYVHIFRNIPAISLLVIVVYALP 78

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L +I     L +D  V+     IG                   AAF +E + +G+  + 
Sbjct: 79  NLKII-----LPYDACVMVTAALIG-------------------AAFASENIMTGINTIA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA--DLVS 351
            GQ+EAA +LG T  ++ R V+LPQA+RS + P+T+  + L+  +++A  V     +L  
Sbjct: 115 LGQIEAARSLGFTFMQSLRAVILPQALRSCVLPMTNLLIALILTTAIASQVPLVPQELTG 174

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   I  +    +    I  F Y+S SI++A   N+L+  + +K 
Sbjct: 175 LVSYINTRAVGGVAAFAISAFGYVSASIVVAYAGNKLDRMVRIKR 219


>gi|330965816|gb|EGH66076.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 217

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 58/121 (47%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L CY AA+I E  R  +  +P GQ EAA AL        R ++LPQA++ ++P L + 
Sbjct: 94  IGLGCYYAAYIGEAYRGAIDDIPAGQWEAARALDFNSGDTWRRIILPQALKPMLPVLGNY 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K + L   +   +L      I   T +  E   +   ++L++S+  +L    L  
Sbjct: 154 LIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLER 213

Query: 391 K 391
           +
Sbjct: 214 R 214


>gi|328544437|ref|YP_004304546.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
 gi|326414179|gb|ADZ71242.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 237

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 67/125 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  +AL+   +++ +E   S    +P+GQ E   ALGLT  +   L++LPQ +R  +P
Sbjct: 104 FVAGMVALALVFSSYASEAFLSAFRGIPQGQYEGGYALGLTRLRTLHLIILPQLVRLALP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +L LLK ++L   +G +DL+   G     T +      +   IYL L+++ +  +
Sbjct: 164 ALGNLWLILLKETALVSVIGLSDLIRQSGIAARVTKEPFLFFGVACLIYLLLAVISSFGI 223

Query: 386 NRLNA 390
            R+ A
Sbjct: 224 VRIEA 228


>gi|16264163|ref|NP_436955.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|307299986|ref|ZP_07579771.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti BL225C]
 gi|307316661|ref|ZP_07596104.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti AK83]
 gi|15140288|emb|CAC48815.1| EhuC [Sinorhizobium meliloti 1021]
 gi|306897859|gb|EFN28602.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti AK83]
 gi|306904875|gb|EFN35458.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti BL225C]
          Length = 219

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 72/135 (53%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T++P   +  +AL     A+ AE+VR  + A+ R Q EA IAL LT  +A R ++LPQ
Sbjct: 78  GITLTP-LQAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIALNLTRFQAMRHIVLPQ 136

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+  ++P   +  + LLK +++   +  +D+      +  QTG  +      + +Y  ++
Sbjct: 137 ALPLMLPTFGNNAIELLKGTAVVSLISLSDMTFQAQVVRAQTGSTLIPFATILLLYFVMA 196

Query: 379 IMIALFMNRLNAKIA 393
            +I+L M  L  +++
Sbjct: 197 WLISLGMRWLERRVS 211


>gi|157369897|ref|YP_001477886.1| arginine transporter permease subunit ArtQ [Serratia proteamaculans
           568]
 gi|157321661|gb|ABV40758.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 246

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 112/222 (50%), Gaps = 20/222 (9%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFHEKTG---------KALPLLYISTFLIFGLPTLVL-IA 239
           V + +LG++L+ LFA   S  +   +          + LP + +  F+ FG   L+L ++
Sbjct: 27  VCALILGLILAMLFAVWESSRWKVVSWLGTAWVTLLRGLPEILVVLFIYFGSSQLLLMLS 86

Query: 240 LKYQLH---FDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L+   F  P+ L   NF     VSP F+   IAL+   +A+ ++ +R  L AVP+G
Sbjct: 87  DGFTLNLGLFQLPIQLAIDNF----EVSP-FLCGVIALALLYSAYASQTLRGALKAVPQG 141

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALG++       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +
Sbjct: 142 QWESGQALGMSTAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKS 201

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I  +T +     +I   IYL ++++    + R+  +    E+
Sbjct: 202 IATRTQEPFTWYVIAAAIYLVVTLISQYIIKRIELRTTRFER 243


>gi|121728667|ref|ZP_01681685.1| arginine ABC transporter, permease protein [Vibrio cholerae V52]
 gi|121629078|gb|EAX61524.1| arginine ABC transporter, permease protein [Vibrio cholerae V52]
          Length = 222

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGIAGTFYLTVNGILTLIFRQIEKK 215


>gi|323466209|gb|ADX69896.1| Amino acid ABC transporter, permease protein [Lactobacillus
           helveticus H10]
          Length = 224

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 27/193 (13%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263
           R    K  + +  +Y+  F I  LP++VL+ L Y      LH + P         G+ ++
Sbjct: 47  RTMPNKIIRCILRVYMEIFRI--LPSVVLLYLVYYILPRSLHINWP---------GTWMA 95

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  +A S + AA  ++IVR  L +VP  Q E+ +ALGL+  +    VLLPQA +  
Sbjct: 96  ------VLAFSLWVAAEFSDIVRGALQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLE 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYLSLS 378
           +P   +    ++K +S+ + +   D+++VG  II    Q     + W+     F Y  L 
Sbjct: 150 LPATINLATRVIKTTSILMLISVMDVINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILD 209

Query: 379 IMIALFMNRLNAK 391
             ++++   L AK
Sbjct: 210 YPLSVWAKSLMAK 222



 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   + W+A   +    +IGT+ G  R   NK++  I RVY+E+FR +P +V+++ +
Sbjct: 18  LLVGLWTSIWIAALSIFIGLLIGTVFGVLRTMPNKIIRCILRVYMEIFRILPSVVLLYLV 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|237665991|ref|ZP_04525979.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237658938|gb|EEP56490.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 221

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 88/177 (49%), Gaps = 24/177 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L    LK        V+G   F+GGS                   
Sbjct: 66  PLLVQIFFLYFGLPKL---GLKMS-ETTCAVIG-LAFLGGS------------------- 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE  RSGL AV + Q+E+ I++GL+  +  R V++PQA    +P +++ ++ LLK +S
Sbjct: 102 YMAEAFRSGLEAVSKSQIESGISIGLSKTQLIRYVIIPQAFSISMPSISANFIFLLKETS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  A+   ++ ++   +I    +  E + + + +YL + + I+  ++ L  K+   E
Sbjct: 162 ILGAISIIEVTNLTKDLIGMYYRTFESLAMLVIVYLIIILPISFVLSLLERKLRYAE 218


>gi|119025521|ref|YP_909366.1| permease protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154486959|ref|ZP_02028366.1| hypothetical protein BIFADO_00796 [Bifidobacterium adolescentis
           L2-32]
 gi|118765105|dbj|BAF39284.1| permease protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154084822|gb|EDN83867.1| hypothetical protein BIFADO_00796 [Bifidobacterium adolescentis
           L2-32]
          Length = 218

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 34/219 (15%)

Query: 189 IFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           I VF  +L IV+ L             R     + +  +  PLL    FL FGLP L L+
Sbjct: 24  ISVFGIILAIVVGLVCAGIEIARIPVLRQVVRVYIELSRNTPLLVQLYFLYFGLPKLGLV 83

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                   +   +    F+GGS                   ++AE +R GL  +P  Q E
Sbjct: 84  -----WSAELCAIVGLGFLGGS-------------------YMAEAMRGGLETIPEVQRE 119

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +A  LGL+  +    V++PQA+ + IP + +  + L+K SS+  A+  AD++ +   +I 
Sbjct: 120 SAYVLGLSKWQTLSRVVIPQAISTSIPGVVANVIFLIKESSVVSAIALADVMYMAKDLIG 179

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 E + + +  YL + + I+LF   L  +   + +
Sbjct: 180 MYYDTYESLFLLIVAYLVILLPISLFGTWLERRFDYERR 218



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 40/71 (56%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  S YA   + G   T +++  G+I A ++G +     ++   ++  + RVY+E+ RN
Sbjct: 4   WTFISHYAPFFVSGAEMTLFISVFGIILAIVVGLVCAGIEIARIPVLRQVVRVYIELSRN 63

Query: 139 IPPLVVIFFLY 149
            P LV ++FLY
Sbjct: 64  TPLLVQLYFLY 74


>gi|149021567|ref|ZP_01835622.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|147930263|gb|EDK81248.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
          Length = 219

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T+A + EI+R GL AV +GQ E  ++ G T  +    ++LPQA+R ++P + SQ+
Sbjct: 90  AFTLFTSAALVEIIRGGLNAVDKGQYEVGMSQGFTSAQILYYIILPQAIRKMLPAIISQF 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++SL  +V
Sbjct: 150 VTVIKDTSLLYSV 162



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 Y 149
           +
Sbjct: 76  F 76


>gi|308067740|ref|YP_003869345.1| Hypothetical amino-acid ABC transporter permease protein
           [Paenibacillus polymyxa E681]
 gi|305857019|gb|ADM68807.1| Hypothetical amino-acid ABC transporter permease protein
           [Paenibacillus polymyxa E681]
          Length = 219

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 64/111 (57%), Gaps = 6/111 (5%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV+G++  +  +T +       +A     AA+ AEI R G++++ +GQ EA+  LGL+  
Sbjct: 80  PVIGEYLVMDRTTAA------VLAFVLNYAAYFAEIFRGGMLSIDKGQYEASQVLGLSKS 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           +    V++PQ +R  +P +T++   L+K+++L  AV   +L+    T +N+
Sbjct: 134 QTLIRVIVPQMVRIALPAVTNEATTLVKDTALLYAVAVPELLHFANTAVNR 184


>gi|258626821|ref|ZP_05721628.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|262171175|ref|ZP_06038853.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           mimicus MB-451]
 gi|258580868|gb|EEW05810.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|261892251|gb|EEY38237.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           mimicus MB-451]
          Length = 246

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R
Sbjct: 112 VSP-FVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSSSMSFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             IP   + +L LLK ++L   +G  D+V +
Sbjct: 171 HAIPGFGNNWLVLLKTTALVSIIGLEDMVRI 201


>gi|302388440|ref|YP_003824262.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302199068|gb|ADL06639.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 216

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 67/115 (58%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI RSG+ ++P GQ EAA  LG +  +    ++ PQ ++ I+P +T++ + L+K+
Sbjct: 99  AAYFAEIYRSGIQSMPVGQYEAAKLLGYSKTQTFFRIIFPQVVKRILPSVTNEVITLVKD 158

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +   ++ +V   + +     I  +   +F Y+  ++++A+ M  +  ++
Sbjct: 159 TSLAFTISVLEMFAVAKALASSQTSLIPFVAAGLFYYI-FNLIVAVGMEYIEKRM 212


>gi|288871381|ref|ZP_06117362.2| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Clostridium hathewayi DSM 13479]
 gi|288863723|gb|EFC96021.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Clostridium hathewayi DSM 13479]
          Length = 288

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           V   F F G S V    MS+  A    +S  T A++AE VR G+ +   GQ E A ALG+
Sbjct: 123 VQAMFLFFGASAVFQINMSIGFAAFFIVSINTGAYMAESVRGGINSTDPGQTEGAKALGM 182

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +   LV+LPQA+R+I+P + +  +  +K++ +   +G  +L      +     +  E
Sbjct: 183 THVQTMVLVVLPQALRNIMPQIGNNLIINIKDTCVLSVIGVVELFYTSKGVAGAYYRYFE 242

Query: 366 IILIWMFIYLSLS 378
              I M +Y  L+
Sbjct: 243 AFTITMVLYFVLT 255


>gi|224367456|ref|YP_002601619.1| amino acid transport system, permease protein (HisMQ-family
           protein) [Desulfobacterium autotrophicum HRM2]
 gi|223690172|gb|ACN13455.1| amino acid transport system, permease protein (HisMQ-family
           protein) [Desulfobacterium autotrophicum HRM2]
          Length = 225

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 70/115 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +++ + L   TAA+ A I R  ++++P GQ +AA ALG+++ +A   ++LPQ +R  
Sbjct: 87  PAVVAVTLVLGMTTAAYQANIFRGAMLSIPSGQFKAANALGMSNVQAIVYIVLPQVLRIS 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           IP  ++++  +LK+S+LA  +G  ++++    + ++T Q + + +    +Y  L+
Sbjct: 147 IPAWSNEFSIILKDSALAFVIGAPEIMARTQFVASRTYQHLPLYITAGLLYFVLT 201


>gi|117620358|ref|YP_856223.1| histidine ABC transporter, permease protein HisM [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117561765|gb|ABK38713.1| histidine ABC transporter, permease protein HisM [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 230

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 4/144 (2%)

Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            Q+ ++  S     F   +    +A +  T A+ AEIVR  ++ +P+GQ+EAA A G+T 
Sbjct: 77  AQWEWLKNSVAWDLFAEAWFCALLAFTLNTGAYTAEIVRGAVLNMPKGQIEAANAFGMTR 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    ++LP + R  +P  +++ + +L+ S++A  +   DL      I ++     E  
Sbjct: 137 WQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARIINSRYYSPFEAF 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           L    +Y+ L+ +I     +  A+
Sbjct: 197 LTAGLLYMLLTFVIVWLFKKWEAR 220


>gi|290508513|ref|ZP_06547884.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|289777907|gb|EFD85904.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 250

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 61/111 (54%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A+ AE  R+G  AV +GQ EAA ++GL+     R ++ PQA  S +P  TS  
Sbjct: 106 ALSLIFSAYFAETFRAGWNAVDKGQREAAWSIGLSGFTQFRRIIFPQAAVSALPNFTSVL 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++L+K++SL   +   DL++       +    +E   + + IY+ L + IA
Sbjct: 166 IDLIKDTSLVYTITVIDLMAKANIAAARGFHFVEAYCVVLVIYIVLCLAIA 216


>gi|270262830|ref|ZP_06191101.1| transporter [Serratia odorifera 4Rx13]
 gi|270043514|gb|EFA16607.1| transporter [Serratia odorifera 4Rx13]
          Length = 234

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRAVPHGEIEAASAYGFSRFKMYRCIILPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL++S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFYAFGIAAVLYLAISYVLISLF 221


>gi|88855905|ref|ZP_01130567.1| amino acid ABC transporter, permease [marine actinobacterium
           PHSC20C1]
 gi|88814772|gb|EAR24632.1| amino acid ABC transporter, permease [marine actinobacterium
           PHSC20C1]
          Length = 216

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 52/76 (68%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I LS +++A++AEI RSG+ +V  GQ+EA+ +LG++       V+ PQA+R +IP
Sbjct: 86  FTAATIGLSVHSSAYVAEIFRSGINSVHSGQVEASRSLGMSRAATMIRVVAPQALRVVIP 145

Query: 326 PLTSQYLNLLKNSSLA 341
            L +Q +  LK+S++A
Sbjct: 146 ALVNQAIISLKDSAVA 161


>gi|320010632|gb|ADW05482.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces flavogriseus ATCC 33331]
          Length = 244

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 64/119 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A      A+ +EIVR  + +VPR Q EAA+AL +T     R V++PQA   +IP  T+ 
Sbjct: 94  VAFGLNYGAYGSEIVRGAINSVPRAQYEAAVALNMTPLHRMRKVIMPQAWVQMIPSFTNL 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + LLK + L   +  AD ++    I + TG+ +   L+ + +Y  L+  + L MN L 
Sbjct: 154 LIQLLKCTPLLWLISAADFMTTIEHIRSLTGETLTAYLLLLAVYFVLAYTLTLLMNLLE 212


>gi|210620908|ref|ZP_03292325.1| hypothetical protein CLOHIR_00268 [Clostridium hiranonis DSM 13275]
 gi|210155120|gb|EEA86126.1| hypothetical protein CLOHIR_00268 [Clostridium hiranonis DSM 13275]
          Length = 206

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YTA F AEI R G+ ++ +GQ EAA  LG       + ++LPQ ++ ++ P++++ + L+
Sbjct: 88  YTAYF-AEIFRGGIQSIDKGQYEAAYVLGFDKVSMYKRIILPQVVKRVLAPVSNEVITLV 146

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTG 361
           K++SL   +G  D++ +    +N+ G
Sbjct: 147 KDTSLVYILGLNDILRISQIAMNREG 172


>gi|254229001|ref|ZP_04922422.1| membrane protein [Vibrio sp. Ex25]
 gi|262394742|ref|YP_003286596.1| arginine/ornithine ABC transporter permease AotQ [Vibrio sp. Ex25]
 gi|151938469|gb|EDN57306.1| membrane protein [Vibrio sp. Ex25]
 gi|262338336|gb|ACY52131.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. Ex25]
          Length = 246

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 27/185 (14%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL---------I 238
           ++ V S +L ++L +    L++    K  +A+  LY  T +I G+P LVL         I
Sbjct: 20  EVAVLSLLLAVILGMLGA-LAKLAPYKWARAIATLY--TTVIRGIPDLVLMMLIFFGGQI 76

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIV 285
            L   L+     L ++     S  + E+ S    YI +S + A          A++AE  
Sbjct: 77  LLNNSLYSINETLNEW--FASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETF 134

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +G
Sbjct: 135 RGAIMAVDKGELEAAKAYGMSSALSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIG 194

Query: 346 FADLV 350
             D+V
Sbjct: 195 LDDMV 199


>gi|322372849|ref|ZP_08047385.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321277891|gb|EFX54960.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 216

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 50/73 (68%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEI+R GL ++  GQ EA ++ G T+++    ++ PQA+R ++P + SQ+
Sbjct: 87  SFTVFTSAALAEIIRGGLNSIDHGQTEAGLSQGFTNKQIFVYIIFPQAIRKMLPSIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 147 VTVIKDTSFLYSV 159



 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 34/58 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T +L+F  ++ +T  GT++   R   N ++ WI  +Y+E  RN+P L+ IF ++
Sbjct: 16  GLWTTLYLSFFIIVLSTFFGTILAVMRNGKNPILRWIASIYIEFVRNVPNLLWIFIIF 73


>gi|301155863|emb|CBW15331.1| arginine transporter subunit [Haemophilus parainfluenzae T3T1]
          Length = 209

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 68/126 (53%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   A++ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+
Sbjct: 81  ALSLIFASYASQTLRGAIQAIPKGQWESGAALGLSRPYTFINLIMPQVWRHALPGLSNQW 140

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +G  DL+   G I   T +      I   IYL ++++    + +L  +
Sbjct: 141 LVLLKDTALVSLIGVDDLMRQAGYINTNTHEPFTWYGIAALIYLVITLISQAGIRKLELR 200

Query: 392 IALKEK 397
               E+
Sbjct: 201 FTRFER 206


>gi|206579704|ref|YP_002237384.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|206568762|gb|ACI10538.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
          Length = 250

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 61/111 (54%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   +A+ AE  R+G  AV +GQ EAA ++GL+     R ++ PQA  S +P  TS  
Sbjct: 106 ALSLIFSAYFAETFRAGWNAVDKGQREAAWSIGLSGFTQFRRIIFPQAAVSALPNFTSVL 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++L+K++SL   +   DL++       +    +E   + + IY+ L + IA
Sbjct: 166 IDLIKDTSLVYTITVIDLMAKANIAAARGFHFVEAYCVVLVIYIVLCLAIA 216


>gi|254360617|ref|ZP_04976766.1| possible arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261493366|ref|ZP_05989892.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496632|ref|ZP_05993012.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|153091157|gb|EDN73162.1| possible arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261307835|gb|EEY09158.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311010|gb|EEY12187.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 223

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 6/125 (4%)

Query: 262 VSPEFMSL------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           ++ EF  L       IAL    AA+ ++ +R  + A+P GQ E+  ALGL+  +    ++
Sbjct: 79  ITDEFAELNAFWCGAIALGIIFAAYASQSLRGAIKAIPVGQWESGTALGLSRAQVFVRII 138

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q      I   IYL
Sbjct: 139 LPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQSELINANTHQPFTWYGIAALIYL 198

Query: 376 SLSIM 380
           +++++
Sbjct: 199 AITLI 203


>gi|315038758|ref|YP_004032326.1| amino acid ABC transporter permease [Lactobacillus amylovorus GRL
           1112]
 gi|325957196|ref|YP_004292608.1| amino acid ABC transporter permease [Lactobacillus acidophilus
           30SC]
 gi|312276891|gb|ADQ59531.1| amino acid ABC transporter permease [Lactobacillus amylovorus GRL
           1112]
 gi|325333761|gb|ADZ07669.1| amino acid ABC transporter permease [Lactobacillus acidophilus
           30SC]
          Length = 224

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 27/193 (13%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263
           R    K  + +  +Y+  F I  LP++VL+ L Y      LH + P         G+ ++
Sbjct: 47  RTMPNKIIRCILRVYMEIFRI--LPSVVLLYLVYYILPRSLHINWP---------GTWMA 95

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  +A S + AA  ++IVR  L +VP  Q E+ +ALGL+  +    VLLPQA +  
Sbjct: 96  ------VLAFSLWVAAEFSDIVRGALQSVPLAQKESGLALGLSKMQLFLYVLLPQAFKLE 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYLSLS 378
           +P   +    ++K +S+ + +   D+++VG  II    Q     + W+     F Y  L 
Sbjct: 150 LPATINLATRVIKTTSILMLISVMDVINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILD 209

Query: 379 IMIALFMNRLNAK 391
             ++++   L AK
Sbjct: 210 YPLSVWAKSLMAK 222



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 39/61 (63%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   + W+A   +I   +IGT+ G  R   NK++  I RVY+E+FR +P +V+++ +
Sbjct: 18  LLVGLWTSIWIAALSIIIGLLIGTIFGVLRTMPNKIIRCILRVYMEIFRILPSVVLLYLV 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|295396899|ref|ZP_06807023.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Aerococcus viridans ATCC 11563]
 gi|294974833|gb|EFG50536.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Aerococcus viridans ATCC 11563]
          Length = 484

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 49/81 (60%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ AVP GQ E+   LG+   +  R ++LPQ +  ++P + ++ ++L+K+
Sbjct: 369 AAYFAEIFRGGISAVPDGQYESISVLGIGKMRGFRRIILPQVVNIVLPSIGNEVISLVKD 428

Query: 338 SSLAVAVGFADLVSVGGTIIN 358
           +SL   +G  +L+  G    N
Sbjct: 429 TSLVYVIGLGELLRAGNIAAN 449


>gi|209546301|ref|YP_002278191.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539158|gb|ACI59091.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 234

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA ++G++
Sbjct: 76  LGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT + +E+
Sbjct: 136 GFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195

Query: 367 ILIWMFIYLSLSIMI 381
            L    IYL L+ +I
Sbjct: 196 FLCAAIIYLVLNFII 210


>gi|20502717|gb|AAM22578.1|AF375657_15 AotM [Aeromonas hydrophila]
          Length = 230

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 4/144 (2%)

Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            Q+ ++  S     F   +    +A +  T A+ AEIVR  ++ +P+GQ+EAA A G+T 
Sbjct: 77  AQWEWLKNSVAWDLFAEAWFCALLAFTLNTGAYTAEIVRGAVLNMPKGQIEAANAFGMTR 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    ++LP + R  +P  +++ + +L+ S++A  +   DL      I ++     E  
Sbjct: 137 WQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARIINSRYYSPFEAF 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           L    +Y+ L+ +I     +  A+
Sbjct: 197 LTAGLLYMLLTFVIVWLFKKWEAR 220


>gi|89899050|ref|YP_521521.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343787|gb|ABD67990.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 217

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 11/163 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G+P LV +   + ++F  P +G    I  S     F+ L  A SCY    +AE+ R G
Sbjct: 63  IRGIPILVQL---FFIYFVLPDVG----IQLSAFQAGFIGLGFAYSCY----MAEVFRGG 111

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV  GQ+EAA +LG+        V+LPQA +  +PP  +  + L+K++S A  +   +
Sbjct: 112 IEAVDPGQVEAAKSLGMGRAMTMWRVVLPQAFKVALPPYGNTCIMLIKDTSQASIITVTE 171

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L      I   T +  E+  +    YL L I + + + RL  +
Sbjct: 172 LTFQSKVIAASTFKNAEVFTLVALFYLLLCIPLIMIVGRLEKR 214


>gi|78059831|ref|YP_366406.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77964381|gb|ABB05762.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia sp. 383]
          Length = 218

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 7/167 (4%)

Query: 238 IALKYQLHFDKPVLGQF--NFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + L  +L    P+L Q    F G    G  V+P +++  + L+   +A++ +I R  + A
Sbjct: 53  VILYVELFQGTPLLMQLFLGFFGLPLIGIDVTP-WVAASVVLTLNASAYLTDIWRGCVDA 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPRGQ  AA +LG+T  +  R V+ PQA +  +PP     +  +K+++L   +G  +L  
Sbjct: 112 VPRGQWNAAASLGMTWTQQLRYVVWPQAWKIALPPTVGFLVQAVKSTALTSIIGLTELTK 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            G  I N   +   I  +   +Y ++   +  +   L  +  + + +
Sbjct: 172 TGNIITNAVFKPFPIYAMVALLYFAMCFPLTWYARVLERRYRVAKAR 218


>gi|89893954|ref|YP_517441.1| hypothetical protein DSY1208 [Desulfitobacterium hafniense Y51]
 gi|89333402|dbj|BAE82997.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 253

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 52/77 (67%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AEIVR G+I++ +GQ EAA A+G+ H +    V+LPQ +R+I+P   ++++
Sbjct: 109 VSINTGAYMAEIVRGGIISIDKGQFEAAHAIGMNHIQTMFNVVLPQVIRNILPATGNEFV 168

Query: 333 NLLKNSSLAVAVGFADL 349
             +K++S+   +   +L
Sbjct: 169 INIKDTSVLNVISVTEL 185


>gi|86360357|ref|YP_472245.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284459|gb|ABC93518.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 234

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA ++G++
Sbjct: 76  LGQFGVIRYSFLWPFLREPMVCAILSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT + +E+
Sbjct: 136 GFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 195

Query: 367 ILIWMFIYLSLSIMI 381
            L    IYL L+ +I
Sbjct: 196 FLCAAIIYLVLNFII 210


>gi|182419551|ref|ZP_02950799.1| amino acid ABC transporter, permease protein [Clostridium butyricum
           5521]
 gi|182376586|gb|EDT74161.1| amino acid ABC transporter, permease protein [Clostridium butyricum
           5521]
          Length = 210

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 58/100 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A IAEIVR G+ +V  GQ EA+ + G +  +  R ++LPQ+ ++ IP + SQ
Sbjct: 86  LSFTLFTTAAIAEIVRGGMNSVNAGQYEASYSQGFSKIQTLRYIILPQSFKNCIPTILSQ 145

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++K++S   AVG  +    G  ++     + ++ L++
Sbjct: 146 SSTVIKDTSYLWAVGIEEFTGKGMILMGSFATSTQVFLLF 185


>gi|126665671|ref|ZP_01736652.1| ABC-type arginine transport system, permease component
           [Marinobacter sp. ELB17]
 gi|126629605|gb|EBA00222.1| ABC-type arginine transport system, permease component
           [Marinobacter sp. ELB17]
          Length = 234

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + +     A++ E  R   +AV  GQ+EAA A G +     R ++ PQ +R  +P
Sbjct: 100 FISGVVTIGLIFGAYMTETFRGAFLAVDTGQIEAARAYGFSRWHTFRRIIFPQMLRHALP 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  LLK ++L   +G  D+V V               +   F+YLSL+ +  LF+
Sbjct: 160 GIGNNWQVLLKTTALVSIIGLTDMVRVAEEAAKAERMPFHFFIPVAFVYLSLTAVSELFI 219

Query: 386 NRLNAK 391
             L+ +
Sbjct: 220 KWLDIR 225


>gi|219668329|ref|YP_002458764.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219538589|gb|ACL20328.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 252

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 52/77 (67%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AEIVR G+I++ +GQ EAA A+G+ H +    V+LPQ +R+I+P   ++++
Sbjct: 108 VSINTGAYMAEIVRGGIISIDKGQFEAAHAIGMNHIQTMFNVVLPQVIRNILPATGNEFV 167

Query: 333 NLLKNSSLAVAVGFADL 349
             +K++S+   +   +L
Sbjct: 168 INIKDTSVLNVISVTEL 184


>gi|262089613|gb|ACY24711.1| ABC ectoine/hydroxyectoine transporter EhuC permease protein
           [uncultured organism]
          Length = 219

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 66/123 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ AE++R  + +V +GQ EAA AL +T       ++LPQA+ + IPP T+ 
Sbjct: 88  VGLGLHIGAYGAEVMRGAIRSVAKGQYEAAQALNMTPFTRFNRIILPQALLAAIPPGTNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  +DL      +   T   +EI  + + +Y  ++  I L M  L  
Sbjct: 148 LIELLKNTSLVSLITLSDLAFRARQLDQATFMTLEIFAMALLLYFVMAQAINLAMRMLER 207

Query: 391 KIA 393
           +++
Sbjct: 208 RLS 210



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 8/68 (11%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           TFW    G + A +   L   GRLS  + + W   VY+E+FR    LV +F+LY     V
Sbjct: 19  TFW----GSLLAIVSAVLAALGRLSPIRPLRWFSIVYIEIFRGTSLLVQLFWLY----FV 70

Query: 156 LPIPDHSI 163
           LP+P  +I
Sbjct: 71  LPMPPFNI 78


>gi|264678001|ref|YP_003277908.1| glutamine-binding periplasmic protein [Comamonas testosteroni
           CNB-2]
 gi|262208514|gb|ACY32612.1| glutamine-binding periplasmic protein [Comamonas testosteroni
           CNB-2]
          Length = 193

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S+ + L+   +AF A+ +RSG+  +P  Q+EAA++LG+   +    V+LPQA+RS++ P+
Sbjct: 63  SVILTLTLVCSAFTADYLRSGINTIPGSQIEAALSLGMRPLQIVSAVVLPQALRSVVQPM 122

Query: 328 TSQYLNLLKNSSLAVAVGFA--DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           TS  + L+ ++SLA  + F   +L ++   I N +   I    +   +Y+   ++IA   
Sbjct: 123 TSLLIALMLSTSLASQLPFPGRELTALVSKIANDSALGIAAFAVAATMYVVTGLLIAWAG 182

Query: 386 NRLNAKI 392
             L  K+
Sbjct: 183 AALEKKV 189


>gi|171911209|ref|ZP_02926679.1| amino acid ABC transporter, permease protein, putative
           [Verrucomicrobium spinosum DSM 4136]
          Length = 254

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 11/164 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G P LVL+ + Y         G  N +G   ++  ++     L+ + +++++EI R 
Sbjct: 97  LVRGTPLLVLLLIGY--------YGVANALG---IAKPWLPGVCLLALFHSSYLSEIFRG 145

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
              ++   Q+EAA A+G   ++  R V+ PQA R  +P    Q ++L+K+SSL   +G  
Sbjct: 146 AWESIGASQLEAARAVGFNQQQTWRFVIFPQAFRRALPGTAGQMVSLIKDSSLLSVIGVE 205

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L  +      Q   A+E  +    +Y+ L+I ++ +  R+  +
Sbjct: 206 ELTQMVRAANAQAYTALEGFIPLAVLYILLTIPLSWWTRRIEER 249


>gi|218507648|ref|ZP_03505526.1| octopine ABC transporter, permease protein [Rhizobium etli Brasil
           5]
          Length = 152

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA ++G++
Sbjct: 11  LGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 70

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT + +E+
Sbjct: 71  GFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 130

Query: 367 ILIWMFIYLSLSIMI 381
            L    IYL L+ +I
Sbjct: 131 FLCAAIIYLVLNFII 145


>gi|330821514|ref|YP_004350376.1| asparagine transport system permease protein [Burkholderia gladioli
           BSR3]
 gi|327373509|gb|AEA64864.1| asparagine transport system permease protein [Burkholderia gladioli
           BSR3]
          Length = 220

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 14/199 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +   A++ V    LGIV    A    R    +  +AL L Y+   ++  +P L+L+ L +
Sbjct: 19  LKVTAQVCVLGIPLGIVAGTLAA-YCRAMPSRLLRALSLAYVE--IVRNVPFLILVYLSF 75

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P LG           P F     A + YT  +  EI+R+ L ++  GQ++AA +
Sbjct: 76  ---FGLPKLG--------LRVPAFAIGVAATAFYTGGYFCEILRAALASLSHGQVQAARS 124

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +  R V+LPQ    + P  TS  + + K+SS+   +  A++      +   T  
Sbjct: 125 LGLNAFQVQRHVVLPQIFGFLAPATTSLTIMMFKDSSIFSVMSLAEMTYQSNLLTADTFA 184

Query: 363 AIEIILIWMFIYLSLSIMI 381
            +E++     IY S S+++
Sbjct: 185 YVEVLGTTALIYWSCSVLL 203


>gi|298717122|ref|YP_003729764.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361311|gb|ADI78092.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 226

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 73/123 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    AA+ +EI+R GL AV +  +EAA   G++  K    + LP A+R  +P  +++
Sbjct: 96  LALILNDAAYTSEILRGGLRAVSQQSLEAAKVSGMSSYKIFTRITLPIAIRQALPAYSNE 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++++K +SL   +   ++  +  +I++ T +A+E+ L    IYL L+++++  ++ L  
Sbjct: 156 IISMIKATSLVSTISLMEMTGIADSIVSSTFRALEVFLSAAVIYLILTMLVSKGVSMLER 215

Query: 391 KIA 393
           +++
Sbjct: 216 RLS 218


>gi|323698839|ref|ZP_08110751.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458771|gb|EGB14636.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 227

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 47/70 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ Y  A+ AEI R+G  ++P GQ+EAA  LGL+  +  R + LPQ +  I+PPLT+Q
Sbjct: 92  LGLAAYGGAYFAEIYRAGFQSIPPGQIEAARDLGLSRWQIVRHIQLPQMLTLILPPLTNQ 151

Query: 331 YLNLLKNSSL 340
            + ++K S++
Sbjct: 152 AIIIVKESAI 161


>gi|255264635|ref|ZP_05343977.1| octopine transport system permease protein OccM [Thalassiobium sp.
           R2A62]
 gi|255106970|gb|EET49644.1| octopine transport system permease protein OccM [Thalassiobium sp.
           R2A62]
          Length = 245

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 50/75 (66%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+++EI+R GL+ V +GQMEAA ++G++   A R ++LPQA+R   P   ++ + L+K
Sbjct: 125 TSAYVSEILRGGLVNVDKGQMEAAQSIGMSWLTAMRRIMLPQAIRIAWPAYGNELVLLMK 184

Query: 337 NSSLAVAVGFADLVS 351
            S+L   +   DL+ 
Sbjct: 185 GSALISTITVLDLMG 199


>gi|218709050|ref|YP_002416671.1| histidine transport system permease HisQ [Vibrio splendidus LGP32]
 gi|218322069|emb|CAV18140.1| Histidine transport system permease protein hisQ [Vibrio splendidus
           LGP32]
          Length = 246

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 30/231 (12%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           ++ + S +L +VL +    L++    +  +A+  LY  T +I G+P LVL+ L +   Q+
Sbjct: 20  EVALLSLILAMVLGMLGA-LAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287
             +  +     ++     S +       ++  YI +S + A          A++AE  R 
Sbjct: 77  LLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRG 136

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++AV  G+MEAA A G+    A R +LLPQ +R  +P   + +L LLK ++L   +G  
Sbjct: 137 AIMAVDSGEMEAAKAYGMGPVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           D+V V       T             Y++++I+   F +     + L E+K
Sbjct: 197 DMVRVSALAAGSTKMPFT-------FYMTVAIIFLFFTSVSTGLLKLVERK 240


>gi|262165970|ref|ZP_06033707.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           mimicus VM223]
 gi|262025686|gb|EEY44354.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           mimicus VM223]
          Length = 246

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R
Sbjct: 112 VSP-FVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSSSMSFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             IP   + +L LLK ++L   +G  D+V +
Sbjct: 171 HAIPGFGNNWLVLLKTTALVSIIGLEDMVRI 201


>gi|254465341|ref|ZP_05078752.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium Y4I]
 gi|206686249|gb|EDZ46731.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium Y4I]
          Length = 224

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 21/135 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL       FGLP L+            P L   N +  +          + L+ +
Sbjct: 64  RGTPLLVQLFLFYFGLPQLL------------PALANINGVTAAI---------MGLTLH 102

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AE +R+ +  V R Q EAA ++G+T  +  R ++LPQA R   P L + +++++K
Sbjct: 103 FAAYMAESIRAAIAGVDRSQWEAAQSIGMTQAQMMRRIILPQAARIAAPTLVNYFIDMIK 162

Query: 337 NSSLAVAVGFADLVS 351
            +SLA  +G  +++ 
Sbjct: 163 GTSLAFTLGVTEMMG 177


>gi|254247530|ref|ZP_04940851.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124872306|gb|EAY64022.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 250

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 10/133 (7%)

Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           + T LI G+P LVL+     +L+  L+     LG         + P F++  + L     
Sbjct: 73  VYTTLIRGVPDLVLMLLLFYSLQIWLNLATDALGWDQI----DIDP-FLAGVLVLGFIYG 127

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K++
Sbjct: 128 AYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKST 187

Query: 339 SLAVAVGFADLVS 351
           +L   +G AD+V 
Sbjct: 188 ALVSIIGLADVVK 200


>gi|229542365|ref|ZP_04431425.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229326785|gb|EEN92460.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 229

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 71/128 (55%), Gaps = 1/128 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S + AA +++IVR  LI+VP  Q+E+  A+GL+  +  R VL+PQ++  +IP   + 
Sbjct: 97  IVFSLWMAAEMSDIVRGALISVPMHQVESGKAIGLSTVQLYRYVLVPQSVHLMIPATINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF-MNRLN 389
              ++K +SL + +   D+++VG  II       +    W++ ++ +   I  + ++RL 
Sbjct: 157 MTRIIKTTSLLLLISVVDVINVGQQIIEANSHRYQDGAFWVYGFIFILYFILCYPLSRLA 216

Query: 390 AKIALKEK 397
            ++  + K
Sbjct: 217 RRLERRGK 224


>gi|94987159|ref|YP_595092.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731408|emb|CAJ54771.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 232

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 81/142 (57%), Gaps = 7/142 (4%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q NF   S V+   + L IA S Y      +I+RS +  +P GQ++AA ALG+T  +A  
Sbjct: 90  QLNF---SAVTTSCIVLGIASSSYQT----QIIRSAIQMIPSGQLKAAKALGMTSTQAIL 142

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           +++LPQA+R  IP  +++Y  LLK+S++   +G  ++++    + ++T + + + ++   
Sbjct: 143 VIILPQALRLSIPGWSNEYSILLKDSAICFVLGTPEIMAQTQFVASRTYEHLLLYIVAGI 202

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
           +Y  ++++    + RL   + L
Sbjct: 203 LYFLITLIGVSLLRRLEQYLYL 224


>gi|78066164|ref|YP_368933.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|206559973|ref|YP_002230737.1| binding-protein-dependent transport system inner membrane protein
           [Burkholderia cenocepacia J2315]
 gi|77966909|gb|ABB08289.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia sp. 383]
 gi|198036014|emb|CAR51907.1| binding-protein-dependent transport system inner membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 230

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 25/233 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224
           S P L        K  V S V G    +VL++   R S     F      AL  L   Y+
Sbjct: 10  SLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYV 69

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 70  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     +I  T Q + + L    +Y  L  ++         +++L  +
Sbjct: 177 TVTELLRSAQEVIAATYQPLPLYLAAAAVYWILCQILEWVQRWYEKRLSLPSR 229


>gi|46190817|ref|ZP_00120960.2| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
          Length = 249

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 75/134 (55%), Gaps = 11/134 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + L L+Y  T ++ G+P +V++   Y + F  P LG F  I  S +        IA+   
Sbjct: 76  RILALIY--TTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVLG------TIAVVMG 124

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A+++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++ K
Sbjct: 125 YSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQK 184

Query: 337 NSSLAVAVGFADLV 350
           +  L   +G  D V
Sbjct: 185 DVGLISVLGAVDAV 198


>gi|294793251|ref|ZP_06758397.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Veillonella sp. 6_1_27]
 gi|294456196|gb|EFG24560.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Veillonella sp. 6_1_27]
          Length = 238

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 53/87 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + +Y   + + A + AEI+RS + AV  G+ EAA +LG+T  ++   ++LPQA    
Sbjct: 95  PGLVFVYAVFTLHIAGYSAEIMRSSIDAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMS 154

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           IPPLT+  + +LK ++L   VG  D++
Sbjct: 155 IPPLTNLVIGMLKGTALIFNVGVVDMM 181


>gi|330446638|ref|ZP_08310290.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490829|dbj|GAA04787.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 229

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 6/161 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+      QL+     L Q   + G+     +    +A    TAA+ AEI+R  + 
Sbjct: 62  GTPLLI------QLYLIYYGLSQVIEVQGTLWQEAWFCALVAFILNTAAYTAEIIRGSIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+G++EAA A G++  +A R ++LP A+R  +P  +++ + ++  S++A  V   DL 
Sbjct: 116 SMPQGEIEAAKAYGMSQLQAFRRIILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                + ++     E  L     Y+ L+  I     +L A+
Sbjct: 176 GAARIVNSRYYAPFESFLFAGLCYMVLTFAIIWGFKKLEAR 216


>gi|293602768|ref|ZP_06685208.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292818784|gb|EFF77825.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 66/117 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A++    A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  A++ I 
Sbjct: 89  EMQAACLAMALNLGAYSTEIIRAGIDATPKGQYEAGASLAMTRLQVFRHVVLKPALKRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  S++   +   DL      I ++  +A E+ L+   IYL L+I++
Sbjct: 149 PALSSQIVIVMLGSAVCSQIAAEDLTFAANFIQSRNFRAFEVYLVTTGIYLVLAIVL 205


>gi|306833702|ref|ZP_07466829.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424472|gb|EFM27611.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 226

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           YI     T   ++EI+RS ++ V +GQ+EAA A+GL+  +A   ++ PQA+R  +P L +
Sbjct: 101 YIIFGLMTTGSLSEIIRSAILTVDKGQLEAAQAIGLSTSQAYIRIVFPQAIRQALPNLCN 160

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
             +NL+K +SL   +   D+ ++ 
Sbjct: 161 LVINLVKGTSLVFVMTVKDITAIA 184


>gi|298290396|ref|YP_003692335.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926907|gb|ADH87716.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 270

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           LP  +I  FL      ++L A+ Y + F+          G S   P F+   I L+  T 
Sbjct: 96  LPCFFIMNFLRNSPWLVLLFAMLYIIPFN------VRLFGFSIAVPAFVKAVIGLALPTG 149

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A  AEI+R  + ++  GQ EAA A G         ++LPQA+R +IP   + Y  L+  +
Sbjct: 150 ANFAEIIRGAVQSIHSGQWEAARAFGYMPMAIYWRIILPQALRRMIPGWMNLYALLMIAT 209

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEI--ILIWMFIYLSLSIMIALFMNRLNAKI 392
           SLA   G  D+++   T+++   + + +   +  +F++ +    IAL   R+   +
Sbjct: 210 SLATVTGIQDVITTLNTLLSMENERVIVYFYIATLFLFFAYCYPIALLARRMEQSV 265


>gi|288933972|ref|YP_003438031.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288888701|gb|ADC57019.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 506

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 20/152 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PL+ +  F ++ LP L  +         +P+LG   FI G           ++++  
Sbjct: 65  RSVPLMVLLVF-VYNLPQLFPVT--------QPLLG-VPFIAG----------LVSMTVT 104

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEI R GL++V +GQ EA  AL  +     RL+++PQA R  +P L ++Y+ ++K
Sbjct: 105 EAAYMAEIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIK 164

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            SS+   V   +L+  G  +  Q    +E +L
Sbjct: 165 LSSILSVVSLPELLLTGQRLYAQNFLVMETLL 196


>gi|218679442|ref|ZP_03527339.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 215

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA ++G++
Sbjct: 57  LGQFGVIRYSFLWPFLREPMVCAILSLALCTAGYTAEIFRGGIRAVSPKEIEAARSIGMS 116

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT + +E+
Sbjct: 117 GFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYRTMEV 176

Query: 367 ILIWMFIYLSLSIMI 381
            L    IYL L+ +I
Sbjct: 177 FLCAAIIYLVLNFII 191


>gi|206576834|ref|YP_002237018.1| amino acid ABC transporter, permease protein/ATP-binding protein
           [Klebsiella pneumoniae 342]
 gi|290510951|ref|ZP_06550320.1| amino acid ABC transporter, permease/ATP-binding protein
           [Klebsiella sp. 1_1_55]
 gi|206565892|gb|ACI07668.1| amino acid ABC transporter, permease protein/ATP-binding protein
           [Klebsiella pneumoniae 342]
 gi|289775944|gb|EFD83943.1| amino acid ABC transporter, permease/ATP-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 506

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 20/152 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PL+ +  F ++ LP L  +         +P+LG   FI G           ++++  
Sbjct: 65  RSVPLMVLLVF-VYNLPQLFPVT--------QPLLG-VPFIAG----------LVSMTVT 104

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEI R GL++V +GQ EA  AL  +     RL+++PQA R  +P L ++Y+ ++K
Sbjct: 105 EAAYMAEIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIK 164

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            SS+   V   +L+  G  +  Q    +E +L
Sbjct: 165 LSSILSVVSLPELLLTGQRLYAQNFLVMETLL 196


>gi|15889637|ref|NP_355318.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157535|gb|AAK88103.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 229

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A G+      R + LP+A+R  +P +T + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGMGRFTLIRRIWLPRAIRIALPTITGEVVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +++    YL L+ +IA     +  ++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVAYKVRQDTLLVYEPLIVVTVFYLILTAIIARCFGLVERQVPVRR 229


>gi|154244132|ref|YP_001415090.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154158217|gb|ABS65433.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 227

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 65/111 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ +EIVR+GL ++ + Q+EAA  LGL+  +    V++  A+  + P LTSQ
Sbjct: 95  LALVVNVGAYTSEIVRAGLESIHKSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           Y+ L+  SS+   +   +L +V   I + T ++ E  ++   +YL+LS ++
Sbjct: 155 YVLLMLASSITSQISAEELTAVANRIQSDTFRSFETYIVVGVLYLALSFVV 205



 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 27/54 (50%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  L+F   +   ++GTL   GR      V  +   YVEV RN P LV IF +Y
Sbjct: 24  TLQLSFVATVLGFVLGTLCAIGRSDGAPWVKALVACYVEVIRNTPLLVQIFIIY 77


>gi|261212506|ref|ZP_05926791.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC341]
 gi|260838437|gb|EEX65093.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC341]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F +++ AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAMF-ALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLAVNGILTLIFRQIEKK 215


>gi|303233192|ref|ZP_07319865.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302480777|gb|EFL43864.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 324

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 55/90 (61%)

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AV +GQ EAA ALG +  +  +LV+LPQA+R +IP L SQ + ++K++++A  V 
Sbjct: 162 RAGVHAVGKGQKEAARALGFSRWQVLKLVVLPQAIRYVIPALISQLVVVVKDTTVAYVVS 221

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           + DL+     +I      + +  +   IY+
Sbjct: 222 YPDLMQNARVLITNYDALVSVYFVIAAIYI 251



 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 6/74 (8%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  +A      +  +G ++   R+S N ++ W+ R+ ++ FR +P L++I+F +  
Sbjct: 72  GFLGTLSIAVCAGALSLALGLVLMLCRISHNVVLTWVARILIDFFRGVPSLLLIYFCF-- 129

Query: 152 VLSVLPIPDHSIVL 165
               L IP + I L
Sbjct: 130 ----LVIPRYGIKL 139


>gi|322373495|ref|ZP_08048031.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
 gi|321278537|gb|EFX55606.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
          Length = 226

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 36/208 (17%)

Query: 193 SFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           SF+LG+V+S+         ++LS  + E + +  PLL    FL FGLP + L+     L 
Sbjct: 31  SFLLGLVVSVIRHYRVPILSQLSTAYIELS-RNTPLLIQLFFLYFGLPRIGLV-----LS 84

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            +   +    F+GGS                   ++AE  RSGL AV + Q E  +++GL
Sbjct: 85  SEACAVVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEVGLSIGL 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQ 362
           T  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   +I    +T  
Sbjct: 126 TPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDV 185

Query: 363 AIEIILI-WMFIYLSLSIMIALFMNRLN 389
           A+ ++++ ++ + L +S++ +    RL 
Sbjct: 186 ALGMLVVAYLLMLLPISLVFSWIERRLR 213


>gi|170735290|ref|YP_001774404.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169821328|gb|ACA95909.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 231

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 106/206 (51%), Gaps = 20/206 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           F+F L + L++  T       E+   ++P  L++S F   G P LV I   + L++    
Sbjct: 32  FAFALAVPLAVART------SERRWLSVPSRLFMSVFR--GTPLLVQI---FVLYYG--- 77

Query: 251 LGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           L QF+ +  S     V   F     AL+   AA++AE +R G+  VP G+ EAA+A G++
Sbjct: 78  LAQFSIVRASPLWLLVGGSFSCALCALTLNLAAYMAEDIRGGIAGVPAGEKEAALAFGMS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
               T  V++P+A+  + P L ++ +  LK+++LA  +   DL  V   I  +T    + 
Sbjct: 138 RFMLTWFVVVPRAIGIVAPTLGNEIVLQLKSTALASTITVLDLTGVARRISIET-YTTDA 196

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +++   +Y+ ++ +++  + R+  ++
Sbjct: 197 LMLAGIVYVGITAVLSTVLKRVEGRL 222


>gi|261210506|ref|ZP_05924799.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. RC341]
 gi|260840291|gb|EEX66862.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. RC341]
          Length = 246

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R
Sbjct: 112 VSP-FVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSSAMSFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             IP   + +L LLK ++L   +G  D+V +
Sbjct: 171 HAIPGFGNNWLVLLKTTALVSIIGLEDMVRI 201


>gi|320353111|ref|YP_004194450.1| PAAT family amino acid ABC transporter membrane protein 2
           [Desulfobulbus propionicus DSM 2032]
 gi|320121613|gb|ADW17159.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F  P LG +       +SP + +  I     + A+ +E VR  L+++ RGQ   A AL
Sbjct: 74  LYFGLPNLGLY-------LSP-YAAAVIGFVLCSGAYQSEYVRGALLSIKRGQYLGAQAL 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R +++PQA+R  I    ++ + L+K SSLA  V   +L   G T+  +  + 
Sbjct: 126 GFTGWQTVRWIIVPQAVRRAIHGCGNEIIYLIKYSSLAYIVTCMELTGEGKTVATEYFRF 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E+  I    YL L  +    + R+  ++
Sbjct: 186 TEVFAIIGLYYLGLVTLAIFVLKRIEQRL 214


>gi|315634947|ref|ZP_07890229.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315476499|gb|EFU67249.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q E+A ALGLT  +  R +LLPQ+++ + P   + +  ++
Sbjct: 99  WGTAEMGDLVRGALTSIEKHQTESAYALGLTPLQTFRYILLPQSLKRVTPSAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA+ +G  +++ VG  II  +
Sbjct: 159 KTSSLAMLIGVLEVIKVGQQIIETS 183


>gi|253690233|ref|YP_003019423.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756811|gb|ACT14887.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 238

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 12/187 (6%)

Query: 220 PLLYIS---TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           P+ Y++   T +  G+P L++I L Y      L     + G   F+G     P F++   
Sbjct: 56  PVRYLADGYTTITRGIPDLLIIYLLYFGGSSALTLLAKLFGSNEFLG----FPGFLAGVF 111

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A+   + A   E+ R    AV +G++EAA A G+      R +++P  +R  IP L + +
Sbjct: 112 AVGISSGAQQTEVYRGAFYAVSKGEIEAAKACGMPTMLRLRRIIMPLLLRHAIPALGNVW 171

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +LK S+L    G A+L++   T    TG+  +  +    +YL +SI     M R  + 
Sbjct: 172 QLVLKTSALVSVTGVAELMTQSQTGAGSTGKPFDFFMAAALLYLLISIGSGWIMRRAESH 231

Query: 392 IALKEKK 398
            +   K+
Sbjct: 232 YSRGVKR 238



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +  +   +L+G   T  LA  G +   +IGT+    ++  N+ V ++   Y  + R IP
Sbjct: 13  GEHGWGKLLLIGAGMTLALAICGFLLGAVIGTIGAWSKICGNRPVRYLADGYTTITRGIP 72

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            L++I+ LY    S L +          +F +N  L FP
Sbjct: 73  DLLIIYLLYFGGSSALTLLAK-------LFGSNEFLGFP 104


>gi|126730762|ref|ZP_01746572.1| amino acid ABC transporter protein, permease protein [Sagittula
           stellata E-37]
 gi|126708928|gb|EBA07984.1| amino acid ABC transporter protein, permease protein [Sagittula
           stellata E-37]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 73/135 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   S  +AL  +T+A+++E+ R+G+ +V +GQ E A AL +   +    V+LPQA+  +
Sbjct: 86  PALTSGILALGLHTSAYMSEVYRAGIESVAKGQWEGARALNIPIVRLWVHVILPQALPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP   +  L + K ++L   +   +++     I N+T +  E I I   IYL++S+  A+
Sbjct: 146 IPAAGNYVLMMFKETALLSTITVLEMMGTARVIGNETYRYFEPITIVGAIYLAISLPAAM 205

Query: 384 FMNRLNAKIALKEKK 398
            +  +  KI   +K 
Sbjct: 206 VVRWVEEKIRRSKKS 220


>gi|153800711|ref|ZP_01955297.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-3]
 gi|124123686|gb|EAY42429.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-3]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKK 215


>gi|229514203|ref|ZP_04403664.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TMA
           21]
 gi|229348183|gb|EEO13141.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TMA
           21]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKK 215


>gi|237808391|ref|YP_002892831.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500652|gb|ACQ93245.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 229

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 11/180 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL     L +G+ +L+ +    +  F  PVL +  F    T +  +          
Sbjct: 61  RGTPLLVQLWLLYYGVGSLLPMIPGIRHSFMWPVLREGFFFASVTFTLNY---------- 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ A ++R+ L++VP+G++EA  A G++     R V LP+A+R  +P +  + +  LK
Sbjct: 111 -AAYEAVVLRAALLSVPKGEIEAGKAFGMSRWTLIRRVWLPRAIRIALPTIAGEVVLQLK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + LA  V   DL SV   I   T    E +++    Y++LS +I     R   ++ ++ 
Sbjct: 170 ATPLAFTVTVMDLYSVAYKIRQDTLLVYEPLILVAVFYVALSALIVKVFGRFERQLPVRR 229


>gi|163748060|ref|ZP_02155379.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45]
 gi|161378666|gb|EDQ03116.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45]
          Length = 164

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 5/151 (3%)

Query: 231 GLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           GLP LVLI L +   Q+  +   +G    + G     +F +    +     A+  E  R 
Sbjct: 3   GLPDLVLILLVFFGGQVTLNN--IGAMTGLWGYVEVSQFAAGAGTIGVIFGAYFTETFRG 60

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++A+PRGQ+EA ++ G+      R ++ PQ +R  +P  T+ +L  LK ++L   +G  
Sbjct: 61  AIMAIPRGQIEAGLSCGMHKSLIFRHIIGPQMIRFGLPGFTNNWLVQLKTTALVSVIGLQ 120

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           DLV    T    TGQ    +     IYL L+
Sbjct: 121 DLVYNAFTAWRSTGQLFTFMAAAFAIYLLLT 151


>gi|254456079|ref|ZP_05069508.1| ABC transporter, membrane spanning protein (nopaline) [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207083081|gb|EDZ60507.1| ABC transporter, membrane spanning protein (nopaline) [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 224

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 17/226 (7%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP L   T    K+   S + G+ L LF   L  + +    K     Y  +++  G P 
Sbjct: 9   SFPKLLSATVITLKLLSVSLIAGMFLGLFFAVLRMNNNIFINK---FAYGYSYVFRGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGL 289
           LV I   + ++F    LGQ  ++  + +      P + ++ IA +  T A+ +EI+RS  
Sbjct: 66  LVQI---FIIYFG---LGQIEYLRSTFIWVILKEPYWCAI-IAFALNTGAYTSEILRSAF 118

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             +  G +EA  +LG++++     + +P A+R  +P   ++ + ++K +SLA  V   DL
Sbjct: 119 QTIKPGIIEAGKSLGISNKIIFYKIQIPIAIRQSLPAYGNEIILMMKGTSLASTVTLMDL 178

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             V   II+ T + IE+ ++   IYL ++ +I   +  L  K + +
Sbjct: 179 TGVAKYIISTTFKPIEVFIVAGGIYLFMTFLIHNLIKYLEKKYSFQ 224


>gi|295400466|ref|ZP_06810444.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312112429|ref|YP_003990745.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|294977369|gb|EFG52969.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311217530|gb|ADP76134.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 236

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 64/110 (58%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS    A+++E++RSG++++P+GQ+EAA ++G+   +    ++LPQA+   IP  T+ +
Sbjct: 107 ALSLSAGAYLSEVIRSGILSIPKGQVEAAYSVGMNTFQTMVRIILPQALAQSIPNFTNIF 166

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +  L  SS+A  V   +L      + +   + +E  +    IY  ++I++
Sbjct: 167 VGFLHTSSIAFLVSQKELTGAANIVASTNLKFLEAYIAAGIIYWLVTILV 216


>gi|326560583|gb|EGE10964.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           103P14B1]
 gi|326561456|gb|EGE11806.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           46P47B1]
 gi|326565591|gb|EGE15754.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           12P80B1]
 gi|326568463|gb|EGE18543.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           BC7]
 gi|326576285|gb|EGE26200.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           CO72]
          Length = 240

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 12/175 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P L +  F+ FG  +++L+ +  Q+ +            G     +F +   ALS  
Sbjct: 59  RGIPELLMVFFIFFG-GSIILVTIAKQMGYT-----------GRIDVSQFWAGVTALSIM 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+  E+ R  +  +P+GQ E+A ++G+T  +    ++LPQ     +P L +  L LLK
Sbjct: 107 FGAYATEVFRMAIQDIPKGQWESAQSIGMTPTQTLTRIILPQMWMVALPGLGNLTLVLLK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++L   +G  DL+         T +     L   FIYL+L+ +I LF+    ++
Sbjct: 167 DTALVSLIGLQDLMYFAQRAAQSTQKPFTFYLAAAFIYLALTSVITLFIMWCESR 221


>gi|317405302|gb|EFV85627.1| hypothetical protein HMPREF0005_05119 [Achromobacter xylosoxidans
           C54]
          Length = 152

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VS   M+L  AL+ +TA  +AE++R  L A+P GQM AA ALG+    A   V+ PQ
Sbjct: 16  GGGVSKFGMAL-AALTLHTACLLAEVLRGALQAIPPGQMMAARALGMRPAVAYWTVIWPQ 74

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A R   P     ++  +K++SL   +G  D++     ++  T      +E+ L    +Y 
Sbjct: 75  ARRIAAPAALGVFVGAVKDTSLVSIIGVFDVLGAAKAVVAGTDWRAYHVEVYLAVALLYF 134

Query: 376 SLSIMIALFMNRLNAKIA 393
           S S+ +A    R+   ++
Sbjct: 135 SASLALARVARRMEGAVS 152


>gi|317047032|ref|YP_004114680.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948649|gb|ADU68124.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 58/102 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LGLT  +    V+LP +++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRSQTFLRVVLPPSLQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V + +L      I ++T  + E+ L+   IYL+LSI
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSI 203


>gi|168207981|ref|ZP_02633986.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens E str. JGS1987]
 gi|182627284|ref|ZP_02954973.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens D str. JGS1721]
 gi|170660732|gb|EDT13415.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens E str. JGS1987]
 gi|177907297|gb|EDT70025.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens D str. JGS1721]
          Length = 213

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA +   AA+  EI RSG+  + +GQ EA+  LGL+     + ++LPQ+ +  +
Sbjct: 83  RFPAAIIAFTLNYAAYFGEIFRSGIKDIDKGQFEASKILGLSKWFTFKKIILPQSFKKTL 142

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           P + ++ + L+K++SL   VG  +L+  G    N+   
Sbjct: 143 PSIANEVITLVKDTSLVYVVGIGELLRAGKIASNRDAS 180


>gi|86146432|ref|ZP_01064755.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85835695|gb|EAQ53830.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 246

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 30/231 (12%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           ++ + S +L +VL +    L++    +  +A+  LY  T +I G+P LVL+ L +   Q+
Sbjct: 20  EVALLSLILAMVLGMLGA-LAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287
             +  +     ++     S +       ++  YI +S + A          A++AE  R 
Sbjct: 77  LLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRG 136

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++AV  G+MEAA A G+    A R +LLPQ +R  +P   + +L LLK ++L   +G  
Sbjct: 137 AIMAVDSGEMEAAKAYGMGPVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           D+V V       T             Y++++I+   F +     + L E+K
Sbjct: 197 DMVRVSSLAAGSTKMPFT-------FYMTVAIIFLFFTSVSTGLLKLVERK 240


>gi|260103305|ref|ZP_05753542.1| amino acid ABC superfamily ATP binding cassette transporter
           [Lactobacillus helveticus DSM 20075]
 gi|260082886|gb|EEW67006.1| amino acid ABC superfamily ATP binding cassette transporter
           [Lactobacillus helveticus DSM 20075]
          Length = 224

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 27/193 (13%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263
           R    K  + +  +Y+  F I  LP++VL+ L Y      LH + P         G+ ++
Sbjct: 47  RTMLNKIIRCILRVYMEIFRI--LPSVVLLYLVYYILPRSLHINWP---------GTWMA 95

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  +A S + AA  ++IVR  L +VP  Q E+ +ALGL+  +    VLLPQA +  
Sbjct: 96  ------VLAFSLWVAAEFSDIVRGALQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLE 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYLSLS 378
           +P   +    ++K +S+ + +   D+++VG  II    Q     + W+     F Y  L 
Sbjct: 150 LPATINLATRVIKTTSILMLISVMDVINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILD 209

Query: 379 IMIALFMNRLNAK 391
             ++++   L AK
Sbjct: 210 YPLSVWAKSLMAK 222



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 38/61 (62%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   + W+A   +    +IGT+ G  R   NK++  I RVY+E+FR +P +V+++ +
Sbjct: 18  LLVGLWTSIWIAALSIFIGLLIGTVFGVLRTMLNKIIRCILRVYMEIFRILPSVVLLYLV 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|170698704|ref|ZP_02889770.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170136408|gb|EDT04670.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 259

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 25/234 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224
           S P L        K  V S V G    ++L++   R S     F      AL  L   Y+
Sbjct: 39  SLPVLAQGAVLTVKFAVLSMVFGLLGAVMLAMMGIRQSERLEGFERIWVNALAWLARAYV 98

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 99  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 145

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 146 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 205

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L+     +I  T Q + + L    +Y  L  ++         +++L  + 
Sbjct: 206 TVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPARH 259


>gi|152971504|ref|YP_001336613.1| glutamine ABC transporter ATP-binding component [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|330013161|ref|ZP_08307582.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3]
 gi|150956353|gb|ABR78383.1| glutamine ABC transporter ATP-binding component [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|328533587|gb|EGF60305.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3]
          Length = 506

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 20/152 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PL+ +  F ++ LP L  +         +P+LG   FI G           ++++  
Sbjct: 65  RSVPLMVLLVF-VYNLPQLFPVT--------QPLLG-VPFIAG----------LVSMTVT 104

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEI R GL++V +GQ EA  AL  +     RL+++PQA R  +P L ++Y+ ++K
Sbjct: 105 EAAYMAEIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIK 164

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            SS+   V   +L+  G  +  Q    +E +L
Sbjct: 165 LSSILSVVSLPELLLTGQRLYAQNFLVMETLL 196


>gi|153824333|ref|ZP_01977000.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2]
 gi|149741887|gb|EDM55916.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKK 215


>gi|153829858|ref|ZP_01982525.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39]
 gi|227812324|ref|YP_002812334.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|254226188|ref|ZP_04919783.1| arginine ABC transporter, permease protein [Vibrio cholerae V51]
 gi|254285778|ref|ZP_04960741.1| arginine ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|298499553|ref|ZP_07009359.1| arginine ABC transporter [Vibrio cholerae MAK 757]
 gi|125621290|gb|EAZ49629.1| arginine ABC transporter, permease protein [Vibrio cholerae V51]
 gi|148874659|gb|EDL72794.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39]
 gi|150424275|gb|EDN16213.1| arginine ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|227011466|gb|ACP07677.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|297541534|gb|EFH77585.1| arginine ABC transporter [Vibrio cholerae MAK 757]
          Length = 222

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKK 215


>gi|209546900|ref|YP_002278818.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538144|gb|ACI58078.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 220

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 58/108 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     AF AE  R+ + AVPR Q++A IALGL   +    ++ P A R+ IP L + 
Sbjct: 94  MALGLNLMAFNAEAYRASIQAVPREQLDAGIALGLNPLQRVLYIVFPTAFRASIPVLLTN 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + + + S+L   V   DL+  G T+  +T + IE   +   IY ++S
Sbjct: 154 GIVIFQQSALVAIVAIQDLMYQGKTLATETYRPIETFTVVALIYFAVS 201


>gi|332162245|ref|YP_004298822.1| arginine transporter permease subunit ArtQ [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318606308|emb|CBY27806.1| arginine ABC transporter, permease protein ArtQ [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666475|gb|ADZ43119.1| arginine transporter permease subunit ArtQ [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860380|emb|CBX70690.1| arginine transport system permease protein artQ [Yersinia
           enterocolitica W22703]
          Length = 238

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHF----HEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V +  LG+VL+ LFA   S  +    +  TG     + LP + +  F+ FG   L+++  
Sbjct: 19  VCALALGLVLAMLFAVCESSRWKIVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78

Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L+ F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPVGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSQVAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYVIAAAIYLVVTLL 218


>gi|282865053|ref|ZP_06274106.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces sp. ACTE]
 gi|282559976|gb|EFB65525.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces sp. ACTE]
          Length = 244

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 65/119 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A      A+ AEIVR  + +VPR Q EAA+AL +T     R V++PQA   +IP  T+ 
Sbjct: 94  VAFGLNYGAYGAEIVRGAIKSVPRAQYEAAVALNMTPFHRMRKVIMPQAWVQMIPSFTNL 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + LLK + L   +  ADL++    I ++TG+ +   L+ +  Y  L+  + L MN L 
Sbjct: 154 LIQLLKATPLLWLISAADLMTAVEHIRSRTGETLTAYLLLLAAYFVLAYALTLLMNLLE 212


>gi|330811617|ref|YP_004356079.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379725|gb|AEA71075.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 219

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ AE++R  + +V +GQ EA  AL  +     + ++LPQA+ + IPP T+ 
Sbjct: 88  VGLGLHIGAYGAEVMRGAISSVAKGQYEACTALNFSGFTRFKRIILPQALLAAIPPGTNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  +DL      +   T Q +EI  + + +Y  L+  I   M  +  
Sbjct: 148 LIELLKNTSLVSLITLSDLSFRARQLDQATFQTLEIFSLALVMYFILAQAINFGMRHIER 207

Query: 391 KIA 393
           +++
Sbjct: 208 RLS 210


>gi|167758443|ref|ZP_02430570.1| hypothetical protein CLOSCI_00783 [Clostridium scindens ATCC 35704]
 gi|167664340|gb|EDS08470.1| hypothetical protein CLOSCI_00783 [Clostridium scindens ATCC 35704]
          Length = 216

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 106/212 (50%), Gaps = 15/212 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M  + +IFV + V  + L L A    R    K  + L  +YIS  ++ G P ++ + + Y
Sbjct: 14  MLISIEIFVLTLVFSLPLGL-AVAFGRMSKIKPVQWLAKIYIS--IMRGTPLMLQLMVVY 70

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                    G + +I G  +S  +   ++ I  +   AA+ AEI R G+ ++  GQ EAA
Sbjct: 71  --------FGPY-YIFGIRISSTYRMTAVLIGFAINYAAYFAEIYRGGIESMSVGQYEAA 121

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LG +  +    ++ PQ ++ I+P +T++ + L+K++SLA  +  A++ ++   I    
Sbjct: 122 KVLGYSRPQTFFCIIFPQVIKRILPSVTNEVITLVKDTSLAFVLAVAEMFTIAKQIAAAQ 181

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +  +   +F Y+  ++++A+ M  L  K+
Sbjct: 182 TSMVPFVAAGIFYYV-FNLIVAVVMEALEKKL 212


>gi|126654038|ref|ZP_01725869.1| hypothetical protein BB14905_15635 [Bacillus sp. B14905]
 gi|126589472|gb|EAZ83617.1| hypothetical protein BB14905_15635 [Bacillus sp. B14905]
          Length = 241

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 51/79 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S  T A++AEIVR G++++  GQ EAA A+G+ H +    V+LPQ  R+++P   +Q
Sbjct: 106 LVVSLNTGAYMAEIVRGGIVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQ 165

Query: 331 YLNLLKNSSLAVAVGFADL 349
            +  +K++++   +G  +L
Sbjct: 166 LIMNIKDTAVLNVIGVTEL 184


>gi|295680983|ref|YP_003609557.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295440878|gb|ADG20046.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 229

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 66/133 (49%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L     A+  E  R   ++VPRGQ+EA  A G++ R+    +L PQ MR  +P
Sbjct: 94  FLAGVITLGFIYGAYFTETFRGAFLSVPRGQIEAGFAYGISARRVFTRILFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  L+K ++L   +G AD+V         T       L    IYL+++ +  L +
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTQSFFFFTLATGAIYLAITTISNLVL 213

Query: 386 NRLNAKIALKEKK 398
            RL  + ++  ++
Sbjct: 214 IRLEKRYSIGVRR 226


>gi|207722496|ref|YP_002252932.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206587677|emb|CAQ18259.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 223

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 22/194 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           V+GI L   A  L+ +  +   + L  L   Y++  ++  +P L+L+ L +   F  P L
Sbjct: 27  VIGIPLGGLAGTLAAYAVQSRSRVLAGLARGYVA--MVRNVPYLILVYLSF---FGLPKL 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           G         V    M+  +A+ C   YT  +  EI+R+ L +VPRGQ  AA++LG++  
Sbjct: 82  G---------VPASAMA--VAIGCTALYTGGYFCEILRAALHSVPRGQSGAALSLGMSRW 130

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T   +EI+ 
Sbjct: 131 QVQRYIVAPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYMEILA 190

Query: 369 IWMFIYLSLSIMIA 382
               IY + S+++A
Sbjct: 191 TTAAIYWASSVLLA 204


>gi|52840737|ref|YP_094536.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52627848|gb|AAU26589.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 221

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    ++A+ AEI+R+G+ ++P+GQ EAA+ L +      + ++LPQ +R+I P + ++
Sbjct: 94  VAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPSFYLWKDIILPQVVRNIFPAMINE 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL+    T+  Q       + I  F Y SL +++     ++  
Sbjct: 154 MIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFYYYSLVLLLEALGKKIEK 213

Query: 391 K 391
           +
Sbjct: 214 R 214


>gi|171322526|ref|ZP_02911318.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171092141|gb|EDT37550.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 229

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 10/133 (7%)

Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           + T LI G+P LVL+     +L+  L+     LG         + P F++  + L     
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNSATDALGWDQI----DIDP-FLAGVLVLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K++
Sbjct: 107 AYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFARIMFPQMMRFALPGIGNNWQVLVKST 166

Query: 339 SLAVAVGFADLVS 351
           +L   +G AD+V 
Sbjct: 167 ALVSIIGLADVVK 179


>gi|167034161|ref|YP_001669392.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860649|gb|ABY99056.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 226

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 10/165 (6%)

Query: 233 PTLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LVLI    Y   F+  V G +         P+++ + I L+   +A +AEI R  + +
Sbjct: 67  PWLVLIYFTSYVFPFEIQVAGTW------LAFPDWLKVTIGLALPASANVAEIFRGAVAS 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P  Q EAA +L  +  +  R ++LPQ +R ++PP  + Y  +   ++LA  VG  DL+ 
Sbjct: 121 IPATQWEAARSLAFSRVQIFRSIILPQCLRRMLPPWMNLYAVVTMGTALASLVGVHDLID 180

Query: 352 ---VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +    +N++G  + +    + ++ +    IA    RL  + A
Sbjct: 181 SAQIAANTVNRSGFTVLVYFSVLALFFAYCYPIARLTQRLERRYA 225


>gi|15601990|ref|NP_245062.1| arginine transporter permease subunit ArtQ [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|12720338|gb|AAK02209.1| ArtQ [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 223

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 67/126 (53%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AA+ ++ +R  + A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+
Sbjct: 95  ALSIIFAAYASQSLRGAIQAIPLGQWESGAALGLSRGYTFVQIIMPQVWRHALPGLSNQW 154

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +G  DL+     +   T Q      I   +YL+++++    + +L  +
Sbjct: 155 LVLLKDTALVSLIGVEDLMRQAELVNTVTHQPFTWYGIAALLYLTITLISQFIIRKLEFR 214

Query: 392 IALKEK 397
               E+
Sbjct: 215 FTRFER 220


>gi|119387393|ref|YP_918427.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119377968|gb|ABL72731.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 226

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 63/113 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+ AEI+R+G  ++PRGQ+EAA  L L+  ++   + +PQA+  + P
Sbjct: 89  FAAAVIALVINVGAYTAEIMRAGFQSIPRGQLEAADCLALSPFQSLIQIEVPQAVERVYP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            L SQ++ ++  +S+   +   +L  V   I + T +  E+ L+    YL L+
Sbjct: 149 ALVSQFVLMMLATSIMSQISAEELTGVAYMIQSFTFRGFEVYLVIAVFYLGLA 201



 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)

Query: 79  YTSDSSYATAILVGFVNTFWLAF----SGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           Y  D S+    +   ++  WL      + ++P  ++GT V   RL     V  I  VYVE
Sbjct: 2   YEFDFSFLNDYMPDLIHGIWLTIGMTVASILPGFVLGTAVAVARLRGRPWVKRIATVYVE 61

Query: 135 VFRNIPPLVVIFFLY 149
             RN P ++ +F+L+
Sbjct: 62  AIRNTPLIIQVFWLF 76


>gi|302388263|ref|YP_003824085.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302198891|gb|ADL06462.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 220

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 49/79 (62%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A+S +T+A +AEI R GL ++P+GQ E A + G +  +    ++LPQ  + +IP L SQ 
Sbjct: 94  AISLFTSAVMAEIFRGGLNSIPKGQFEGAQSQGFSFAQTLIYIVLPQTYKKVIPALLSQV 153

Query: 332 LNLLKNSSLAVAVGFADLV 350
           + ++K++S    V  A+ +
Sbjct: 154 ITIIKDTSFLKMVDVAEFM 172


>gi|293401053|ref|ZP_06645198.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306079|gb|EFE47323.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 255

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 61/91 (67%), Gaps = 4/91 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S  T A+++EI+R+G+ ++ +GQ+EAA +LG+T+ +    ++LPQA+R+  P L ++
Sbjct: 114 VIISVNTGAYMSEIIRAGIQSIDKGQIEAARSLGMTNTQTMTAIVLPQAIRNSFPSLGNE 173

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTII 357
            +  +K+SS+   +G  +L     SV G+++
Sbjct: 174 LIVNIKDSSMLNVIGVMELFFQSSSVAGSMM 204


>gi|227892709|ref|ZP_04010514.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ultunensis DSM 16047]
 gi|227865486|gb|EEJ72907.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ultunensis DSM 16047]
          Length = 224

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 27/193 (13%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVS 263
           R    K  + +  +Y+  F I  LP++VL+ L Y      LH + P         G+ ++
Sbjct: 47  RTMPNKIIRCILRVYMEIFRI--LPSVVLLYLVYYILPRSLHINWP---------GTWMA 95

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  +A S + AA  ++IVR  L +VP  Q E+ +ALGL   +    VLLPQA +  
Sbjct: 96  ------VLAFSLWVAAEFSDIVRGALQSVPLAQKESGLALGLNKTQLFLYVLLPQAFKLE 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM-----FIYLSLS 378
           +P   +    ++K +S+ + +   D+++VG  II    Q     + W+     F Y  L 
Sbjct: 150 LPATINLATRVIKTTSILMLISVMDVINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILD 209

Query: 379 IMIALFMNRLNAK 391
             ++++   L AK
Sbjct: 210 YPLSVWAKSLMAK 222



 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 39/61 (63%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   + W+A   ++   +IGT+ G  R   NK++  I RVY+E+FR +P +V+++ +
Sbjct: 18  LLVGLWTSIWIAALSIVIGLLIGTVFGVLRTMPNKIIRCILRVYMEIFRILPSVVLLYLV 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|227508307|ref|ZP_03938356.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227511319|ref|ZP_03941368.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227523525|ref|ZP_03953574.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227085472|gb|EEI20784.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227089290|gb|EEI24602.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227192196|gb|EEI72263.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 229

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%), Gaps = 28/220 (12%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----- 242
           KI   + + GI+L + A  + R F  +  + +  LY+  F +  +PT+VL+ L Y     
Sbjct: 27  KIAAVALIAGIILGI-ALGVLRTFKNRPLRIVLRLYLEFFRV--VPTVVLLFLFYYILPK 83

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           Q++F+ P             + +  +L  AL  +  A +++IVR  LI+VP+ Q+E+  A
Sbjct: 84  QMNFNLP-------------ADQLATLVFAL--WVGAEMSDIVRGALISVPKHQIESGKA 128

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GL+  +    VL+PQ++   IP   +    ++K +S+ + +   D++++G  II     
Sbjct: 129 IGLSRFQLYWYVLIPQSINLEIPATINLATRVIKTTSILLLISVMDVINIGQQIIEANNH 188

Query: 363 AIEIILIWMF-----IYLSLSIMIALFMNRLNAKIALKEK 397
                + W++      Y  +   ++ +  RL  K   +E 
Sbjct: 189 TYPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKKRLEREN 228


>gi|52424277|ref|YP_087414.1| arginine transporter permease subunit ArtM [Mannheimia
           succiniciproducens MBEL55E]
 gi|52306329|gb|AAU36829.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 227

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 11/171 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVR 286
           G P LV    ++ L +  P  GQF +I  S + P     +     AL+  +AA+  ++  
Sbjct: 58  GTPLLV----QFFLIYSGP--GQFQWIVNSALWPLLSNAWFCAMFALALNSAAYSTQLFH 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ E+  ALGL+ R  T  +L+P A++  +P  +++ + + K +SLA  +  
Sbjct: 112 GAVKAIPKGQWESCAALGLS-RLQTLKILIPYALKRALPSYSNEIILVFKGTSLASTITI 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++     +      AI I  I   IYL ++ ++ L + +L  K+   E+
Sbjct: 171 MDIMGYARQLYGTEYDAITIYGIAGVIYLVITGLMTLLLRKLEHKVLAFER 221


>gi|116689574|ref|YP_835197.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|116647663|gb|ABK08304.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 230

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 25/233 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224
           S P L        K  V S V G    +VL++   R S     F      AL  L   Y+
Sbjct: 10  SLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYV 69

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 70  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     +I  T Q + + L    +Y  L  ++         +++L  +
Sbjct: 177 TVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWGQRWYEKRLSLPSR 229


>gi|260662201|ref|ZP_05863097.1| amino acid ABC transporter [Lactobacillus fermentum 28-3-CHN]
 gi|260553584|gb|EEX26476.1| amino acid ABC transporter [Lactobacillus fermentum 28-3-CHN]
          Length = 127

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 64/106 (60%), Gaps = 2/106 (1%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A++AE  RS  +AV +GQ+EAA+A+G+T R+A   +++PQA    +  + + ++ L+K 
Sbjct: 6   SAYLAEAFRSAYLAVDQGQLEAALAVGITPRRAFFRIIVPQAALIALSNIENLFIGLVKG 65

Query: 338 SSLAVAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMI 381
           +SL   +G  D+ +    + NQT     ++I +I   IY +  ++I
Sbjct: 66  TSLVYVLGLYDMYNDASNLSNQTNGIYQLQIFIILALIYWAFVLLI 111


>gi|169828294|ref|YP_001698452.1| glutamine transport system permease [Lysinibacillus sphaericus
           C3-41]
 gi|168992782|gb|ACA40322.1| Glutamine transport system permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 241

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 51/79 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S  T A++AEIVR G++++  GQ EAA A+G+ H +    V+LPQ  R+++P   +Q
Sbjct: 106 LVVSLNTGAYMAEIVRGGIVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQ 165

Query: 331 YLNLLKNSSLAVAVGFADL 349
            +  +K++++   +G  +L
Sbjct: 166 LIMNIKDTAVLNVIGVTEL 184


>gi|168215245|ref|ZP_02640870.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens CPE str. F4969]
 gi|170713367|gb|EDT25549.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens CPE str. F4969]
          Length = 213

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 54/97 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IA +   AA+  EI RSG+  + +GQ EA+  LGL+     + ++LPQ+ +  +
Sbjct: 83  RFPAAIIAFTLNYAAYFGEIFRSGIKDIDKGQFEASKILGLSKWFTFKKIILPQSFKKTL 142

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           P + ++ + L+K++SL   VG  +L+  G    N+  
Sbjct: 143 PSIANEVITLVKDTSLVYVVGIGELLRAGKIASNRDA 179


>gi|238792437|ref|ZP_04636071.1| Arginine transport system permease protein artQ [Yersinia
           intermedia ATCC 29909]
 gi|238728363|gb|EEQ19883.1| Arginine transport system permease protein artQ [Yersinia
           intermedia ATCC 29909]
          Length = 238

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFA----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLI-- 238
           V +  LG+VL+ LFA    +R+    +  TG     + LP + +  F+ FG   L+++  
Sbjct: 19  VCALALGLVLAMLFAVCESSRVKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMMLS 78

Query: 239 -ALKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 L+ F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYVIAAAIYLVVTLL 218


>gi|271501780|ref|YP_003334806.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345335|gb|ACZ78100.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 221

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 59/104 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EAA  LGL+  +    V+LP A++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAARVLGLSRTQTFTRVILPPALQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SS+   V + +L      I ++T  + E+ L+    YL LS+++
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLCYLVLSMLM 205


>gi|295109555|emb|CBL23508.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus obeum A2-162]
          Length = 215

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G F   G +  + +F ++ +  S   AA+ AEI RSG+ ++  GQ EAA  LG    +  
Sbjct: 72  GPFYLWGMNIGNYKFTAIILGCSLNYAAYFAEIYRSGIESILVGQYEAAQLLGYNKSQTF 131

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQ ++ ++P +T++ + L+K++SL  +V + ++ ++   I       I  ++  +
Sbjct: 132 FKIVLPQVVKIVLPSVTNEVITLVKDTSLVYSVSYIEMFALAKQIAAAQTTVIPFVIAGV 191

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
           F Y+  + ++A  M     K+
Sbjct: 192 FYYI-FNFVVAWVMEWFEKKL 211


>gi|323525627|ref|YP_004227780.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382629|gb|ADX54720.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 246

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI  +P LVL+ L  Y +        D   L QF+      + P F++  + L     
Sbjct: 71  TTLIRSVPDLVLMLLLFYSIQIAVNNLTDALDLPQFD------IDP-FVAGVLTLGFIYG 123

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K +
Sbjct: 124 AYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFARILFPQMMRFALPGIGNNWQVLVKAT 183

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +G AD+V         T      ILI   IYL+L+
Sbjct: 184 ALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLALT 223


>gi|262043883|ref|ZP_06016971.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038737|gb|EEW39920.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 506

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 20/152 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PL+ +  F ++ LP L  +         +P+LG   FI G           ++++  
Sbjct: 65  RSVPLMVLLVF-VYNLPQLFPVT--------QPLLG-VPFIAG----------LVSMTVT 104

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEI R GL++V +GQ EA  AL  +     RL+++PQA R  +P L ++Y+ ++K
Sbjct: 105 EAAYMAEIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIK 164

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            SS+   V   +L+  G  +  Q    +E +L
Sbjct: 165 LSSILSVVSLPELLLTGQRLYAQNFLVMETLL 196


>gi|146319018|ref|YP_001198730.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus suis 05ZYH33]
 gi|145689824|gb|ABP90330.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus suis 05ZYH33]
          Length = 107

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%)

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q +NL+KN++    +  AD++ 
Sbjct: 1   MPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVAIISGADIMF 60

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  +        I       F+Y  +   +A +  R+  K
Sbjct: 61  MTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEEK 100


>gi|121601743|ref|YP_988905.1| amino acid ABC transporter, permease protein [Bartonella
           bacilliformis KC583]
 gi|120613920|gb|ABM44521.1| amino acid ABC transporter, permease protein [Bartonella
           bacilliformis KC583]
          Length = 240

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 65/124 (52%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  +ALS   AAF  EI  S L    +GQ EAA ALG +       ++ PQ +R+ +P
Sbjct: 104 FIASVLALSMVFAAFSCEIWISALKVFNKGQYEAAKALGFSSSTTFFRIVFPQLIRNALP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +L LLK++SL   +   DL+      ++ TG+ +   L+   +YL  S   +L +
Sbjct: 164 GLSNNWLTLLKDTSLVSTISLVDLMRQTNLAVSATGKPMLFYLVACLLYLLFSAFSSLIL 223

Query: 386 NRLN 389
             L 
Sbjct: 224 RYLE 227


>gi|330819467|ref|YP_004348329.1| ABC transporter, permease protein [Burkholderia gladioli BSR3]
 gi|327371462|gb|AEA62817.1| ABC transporter, permease protein [Burkholderia gladioli BSR3]
          Length = 216

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 1/125 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP   ++  A+S  +AA++AEI+R G   +P GQ+EAA  LGL+       + +PQ
Sbjct: 81  GINVSPVVAAVS-AVSLCSAAYVAEILRGGFENLPPGQIEAARMLGLSAADRLWRIQVPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            MR  +P L ++ + L+K SSL   VG A++      +   T Q +E       IY  L 
Sbjct: 140 VMRLTLPSLANEMVLLIKASSLISVVGVAEITRTAQNLAASTYQPLEAYAAAGLIYFILC 199

Query: 379 IMIAL 383
             +AL
Sbjct: 200 GALAL 204


>gi|224823568|ref|ZP_03696677.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224604023|gb|EEG10197.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 222

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 1/96 (1%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +F G   +SP F  ++ ALS   AA+ +E+ R   + V RGQ+EA  A GL   +    +
Sbjct: 81  HFDGAIEISPFFGGVF-ALSIIFAAYSSEVFRGAFLEVGRGQLEAGQAYGLNRFQLFCFI 139

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            LP A R+ +P L + + +LLK++SL   VG  D++
Sbjct: 140 RLPLAWRTALPSLNNMWQSLLKDTSLISVVGLEDML 175


>gi|218507649|ref|ZP_03505527.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli
           Brasil 5]
          Length = 163

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 19/136 (13%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   V+G+VL++     SR         LP   + T +  GLP +V I           +
Sbjct: 45  VLGVVIGMVLAVMGISQSRWLR------LPA-RVYTDIFRGLPAIVTIL----------I 87

Query: 251 LGQ-FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +GQ F  IG     P    L I ALS    A+I EI RSG+ +V RGQMEA  AL +++ 
Sbjct: 88  IGQGFARIGREMFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYG 147

Query: 309 KATRLVLLPQAMRSII 324
           +  RL+++PQ +R ++
Sbjct: 148 QGMRLIVIPQGIRRVL 163


>gi|298293523|ref|YP_003695462.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930034|gb|ADH90843.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 219

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             K  +A+   Y+S F   G+P LV + + Y   +  P++G  N        P  ++   
Sbjct: 46  QSKPMRAIAAFYVSFFR--GVPLLVQLLISY---YCLPLIG-VNV-------PSSVAAVG 92

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+  T A+IAEI+R G + +P G +EAA  +GL   +    + +P A+R  +P L ++ 
Sbjct: 93  TLALCTGAYIAEILRGGFLGIPAGLIEAARMVGLNRVQILTRIEVPMAVRFTLPSLVNET 152

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
             ++K SSL   VG  +L  +   I   T Q +EI L    IY
Sbjct: 153 TMMVKASSLISVVGVLELTRLAQNIATSTFQPLEIYLTAGAIY 195


>gi|306831556|ref|ZP_07464714.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978463|ref|YP_004288179.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|304426341|gb|EFM29455.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178391|emb|CBZ48435.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 226

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           YI     T   ++EI+RS ++ V +GQ+EAA A+GL+  +A   ++ PQA+R  +P L +
Sbjct: 101 YIIFGLMTTGSLSEIIRSAILTVDKGQLEAAQAIGLSTSQAYIRIVFPQAIRQALPNLCN 160

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
             +NL+K +SL   +   D+ ++ 
Sbjct: 161 LVINLVKGTSLVFVMTVKDITAIA 184


>gi|302386909|ref|YP_003822731.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302197537|gb|ADL05108.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 225

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 17/163 (10%)

Query: 215 TGKALPL-----LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           T K +P+     +Y+ T  I  +P LVL+ L Y   F        NF G        M+ 
Sbjct: 48  TSKKMPVKFFTRIYLETVRI--MPQLVLLFLVY---FGAAKHLNVNFSGQ-------MAA 95

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I  + +  A + ++VRS L ++P  Q ++   LG+T  +  R +++PQ +R ++P + +
Sbjct: 96  VIVFTFWGTAEMGDLVRSALESIPVHQYQSGFGLGMTVLQVYRYIVIPQTIRRLLPSVMN 155

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
               ++K +SL V +G  ++V VG  +I+ +   +    +W++
Sbjct: 156 LLTRMIKTTSLVVLIGVIEVVKVGKQVIDASRYTVPDAALWVY 198


>gi|220905024|ref|YP_002480336.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869323|gb|ACL49658.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 222

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T ++ G+P LV + + Y   +  P LG +         P + +   +    TAA+ +E V
Sbjct: 59  TAIVRGVPLLVQLMMIY---YALPKLGIYF--------PPYGAALTSFILCTAAYQSEYV 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L+++ +GQ+ AA ALG +  K    +++PQA R  +P   ++ + L+K SSLA  V 
Sbjct: 108 RGALLSIRQGQIRAAQALGFSTWKTVAWIVVPQAARRALPGCGNEIIYLIKYSSLAYFVT 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+  G  + + T +  E+ +     YL++  +   F+  L  +
Sbjct: 168 CMELMGEGKVVASDTFRFTEVFITVGAYYLAMVTLATFFLRWLERR 213


>gi|167033608|ref|YP_001668839.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860096|gb|ABY98503.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 215

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 13/174 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+S F   G P LV +   + ++F  P +G         + P F +  I L    AA++
Sbjct: 55  IYVSVFR--GTPCLVQL---FIIYFGGPQIG-------IELEP-FSAAVIGLGMNIAAYM 101

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  +  V  GQ E A ++G + R+    +++PQA++ +I PL    + L+K S+L 
Sbjct: 102 SESIRGAIDNVDPGQEEGARSIGFSRRQTLLFIIIPQALKLMIRPLGVNAIGLIKGSALV 161

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            A+   +L       I+ T +  EI ++   +Y+ +   +   +  L+ + A K
Sbjct: 162 SAISVVELTYTAQRFISSTYKPFEIFMVSALLYIVMVYSVKYLVEVLDRRYATK 215



 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           AGRLS   ++ W  ++YV VFR  P LV +F +Y
Sbjct: 40  AGRLSPVIILRWAAKIYVSVFRGTPCLVQLFIIY 73


>gi|308235035|ref|ZP_07665772.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
          Length = 367

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 80/142 (56%), Gaps = 2/142 (1%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F G S  S  + ++ ++L  Y  + +AE+VRSG+  +P GQ EA++ALGL+  ++   
Sbjct: 135 FAFAGISGAS--YWAVVLSLILYNGSVVAELVRSGVGNLPNGQREASLALGLSQYQSLTQ 192

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +     ++ + +   +
Sbjct: 193 IEMPQAIIAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFNILQTLTVAAVV 252

Query: 374 YLSLSIMIALFMNRLNAKIALK 395
           Y  +   ++ F   L +K++ +
Sbjct: 253 YFLICWALSWFAEWLPSKLSSR 274


>gi|299537135|ref|ZP_07050438.1| glutamine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298727376|gb|EFI67948.1| glutamine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 241

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 51/79 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S  T A++AEIVR G++++  GQ EAA A+G+ H +    V+LPQ  R+++P   +Q
Sbjct: 106 LVVSLNTGAYMAEIVRGGIVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQ 165

Query: 331 YLNLLKNSSLAVAVGFADL 349
            +  +K++++   +G  +L
Sbjct: 166 LIMNIKDTAVLNVIGVTEL 184


>gi|121594464|ref|YP_986360.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|120606544|gb|ABM42284.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 230

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 26/208 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG+VL  F+  + R         +  +Y+S F   G P LV I   + L++  P +G
Sbjct: 39  SMVLGLVLG-FSVAVVRVTKVPVVSQIAAVYVSAF--RGTPLLVQI---FVLYYGLPSVG 92

Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +F  +             +AL+   AA+++E +R  ++ + +GQ EA +++GLT  +  
Sbjct: 93  IEFTPVTAGI---------LALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTL 143

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++ PQA+R  +P L++  ++L+K++SL   +   +L+     +I +T Q + + L   
Sbjct: 144 WNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAA 203

Query: 372 FIYLSLSIMIALF-------MNRLNAKI 392
            IY  LS   ALF        NRL A +
Sbjct: 204 GIYWLLS---ALFERVQKALENRLTAPL 228


>gi|296313422|ref|ZP_06863363.1| amino acid ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
 gi|296840054|gb|EFH23992.1| amino acid ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
          Length = 222

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+ R+  R + LPQ++R  +P   + +  ++
Sbjct: 99  WGVAEMGDLVRGALESIEKHQVESGLALGLSRRQVFRYIELPQSVRRALPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|311114712|ref|YP_003985933.1| glutamine ABC transporter permease [Gardnerella vaginalis ATCC
           14019]
 gi|310946206|gb|ADP38910.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Gardnerella vaginalis ATCC 14019]
          Length = 369

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 62/98 (63%), Gaps = 2/98 (2%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F G S  S  + ++ ++L  Y  + +AE+VRSG+  +P GQ EA++ALGL+  ++   
Sbjct: 137 FAFAGISGAS--YWAVVLSLILYNGSVVAELVRSGVGNLPNGQREASLALGLSQYQSLTQ 194

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +PQA+ +++P   +Q + +LK+++L   + + DL+ 
Sbjct: 195 IEMPQAIIAMLPAAVTQLVVVLKDTALGSIIMYTDLLQ 232


>gi|77406485|ref|ZP_00783540.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77174920|gb|EAO77734.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 213

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G+ ++P+GQ EAA  L  +  +    ++LPQ  + ++P + ++
Sbjct: 89  IAFTMNYAAYFAEIFRGGIESIPKGQYEAAKVLKFSKFQTVWYIVLPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            + L+K+SSL   +G  DL+    T  N+  
Sbjct: 149 TITLVKDSSLVYILGVGDLLLESKTAANRDA 179


>gi|157693108|ref|YP_001487570.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157681866|gb|ABV63010.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 232

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 74/136 (54%), Gaps = 19/136 (13%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++ PL+ +  FLI FGLP L+L+A     H+D+ +     F                 S 
Sbjct: 63  RSTPLI-VQLFLIYFGLPQLLLVAGIQINHWDRMLFVMMTF-----------------SL 104

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +T A+++E+ RS   +V + Q+EAA  +G+T  +A   +++PQA    +P L +  ++L+
Sbjct: 105 HTGAYLSEVFRSAYSSVGKDQLEAAYIVGMTDTQALIRIIIPQAFLIALPNLGNYTIDLV 164

Query: 336 KNSSLAVAVGFADLVS 351
           K++++A  +G  D++ 
Sbjct: 165 KDTAIAFTIGLIDMMG 180


>gi|153821979|ref|ZP_01974646.1| amino acid ABC transproter, permease protein [Vibrio cholerae B33]
 gi|126520518|gb|EAZ77741.1| amino acid ABC transproter, permease protein [Vibrio cholerae B33]
          Length = 114

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 50/67 (74%)

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +
Sbjct: 1   IRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTL 60

Query: 345 GFADLVS 351
           G A++++
Sbjct: 61  GVAEIMA 67


>gi|330500965|ref|YP_004377834.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328915251|gb|AEB56082.1| amino acid ABC transporter, permease protein [Pseudomonas mendocina
           NK-01]
          Length = 219

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 66/123 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ AE++R  + +V +GQ EA  AL +   K    ++LPQA+ + IPP T+ 
Sbjct: 88  VGLGLHIGAYGAEVMRGAIRSVAKGQYEACTALNMRPSKRFMRIILPQALLAAIPPGTNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  +DL      +   T   +EI  + + +Y  ++ +I L M  L  
Sbjct: 148 LIELLKNTSLVSLITLSDLAFRARQLDQATFMTLEIFALTLVLYFVMAQVINLGMRLLEK 207

Query: 391 KIA 393
           +++
Sbjct: 208 RLS 210



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           TFW    G + A +   +   GRLS    + W+   Y+E+FR    LV +F+LY     V
Sbjct: 19  TFW----GSLLAIVSAVIAALGRLSPIAPLRWLAITYIEIFRGTSLLVQLFWLY----FV 70

Query: 156 LPIPDHSI 163
           LP+P  ++
Sbjct: 71  LPMPPFNV 78


>gi|288960751|ref|YP_003451091.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913059|dbj|BAI74547.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 234

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 65/122 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y +A+ AEI R+G  AVP+GQ+EAA++LGL+H    R V++P  + S IP + + 
Sbjct: 92  LGLGLYGSAYFAEIFRAGYQAVPKGQVEAALSLGLSHGAILRRVIVPAMLVSTIPAIVNM 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              L K + +   +   +L+    T+  +T    E IL     Y  L  +++    RL A
Sbjct: 152 MAILTKETVVLSIITVPELMYEMQTMAAETFATFETILGMALFYWLLVEVVSRLGRRLEA 211

Query: 391 KI 392
           ++
Sbjct: 212 RV 213


>gi|258623968|ref|ZP_05718921.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|262173969|ref|ZP_06041646.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus
           MB-451]
 gi|258583762|gb|EEW08558.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|261891327|gb|EEY37314.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus
           MB-451]
          Length = 222

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F +++ AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAMF-ALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKVATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YL+++  + L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLAVNGALTLLFRQIEKK 215


>gi|237807675|ref|YP_002892115.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237499936|gb|ACQ92529.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 231

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 5/111 (4%)

Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           GQ+ ++  S     F   +    +A +  T A+ AEIVR  +  +P+G++EAA + G++ 
Sbjct: 78  GQWQWLQQSWAWEWFQEAWFCSLLAFALNTGAYTAEIVRGSIQMIPKGELEAAASFGMSR 137

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +  R ++LP A+R  +P  +++ + +L  SS+A  +   DL      IIN
Sbjct: 138 WQMLRHIILPSALRRALPAYSNEVILMLHGSSIAGVITVVDLTG-AARIIN 187


>gi|145297673|ref|YP_001140514.1| ABC-type glutamine/glutamate transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850445|gb|ABO88766.1| ABC-type glutamine/glutamate transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 221

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 14/151 (9%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           L+F  P LG         +SP  F +  IA++     ++ E +R+G+ AVP  Q+EA  A
Sbjct: 74  LYFGLPALG---------LSPSGFATAVIAMTFLGGGYLTEALRAGIQAVPTSQLEAGRA 124

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GL+  +  R V LPQA  + +P L + ++ LLK +++A AV   +L+      I    +
Sbjct: 125 IGLSRWQLLRHVQLPQAWLASLPALFANFIFLLKETTVASAVAVPELLYTTKNYIALYYK 184

Query: 363 AIEII----LIWMFIYLSLSIMIALFMNRLN 389
             E++    L+ + I+L LS+ +     RL 
Sbjct: 185 TYEMLAVLTLMCVLIFLPLSLALRALERRLQ 215


>gi|158422352|ref|YP_001523644.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158329241|dbj|BAF86726.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 538

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 24/163 (14%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL +  F+ +GLP                         G  + P F++  +AL  + AA
Sbjct: 381 PLLVLLLFVCYGLPE-----------------------AGLPIGP-FLAGVLALGLHHAA 416

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            +AE  R+ L  V R QMEAA++L ++  +A + V+LPQA+R+++P     ++ +LK+SS
Sbjct: 417 GMAEAYRTRLAVVTRTQMEAAVSLNMSRGQAFKAVVLPQAVRALLPSTARGFVLVLKDSS 476

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           L   +  ADL     ++ +     + I L+   IYL L +  A
Sbjct: 477 LVSVILLADLTRTYESVASVHQDFLGIGLLVAAIYLVLGLPFA 519


>gi|22537108|ref|NP_687959.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010989|ref|NP_735384.1| hypothetical protein gbs0935 [Streptococcus agalactiae NEM316]
 gi|76787817|ref|YP_329663.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798873|ref|ZP_00781081.1| amino acid ABC transporter, permease protein SP1502 [Streptococcus
           agalactiae 18RS21]
 gi|77409385|ref|ZP_00786084.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77411031|ref|ZP_00787386.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77413253|ref|ZP_00789450.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|22533969|gb|AAM99831.1|AE014235_4 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|23095389|emb|CAD46594.1| unknown [Streptococcus agalactiae NEM316]
 gi|76562874|gb|ABA45458.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76585769|gb|EAO62319.1| amino acid ABC transporter, permease protein SP1502 [Streptococcus
           agalactiae 18RS21]
 gi|77160713|gb|EAO71827.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77162955|gb|EAO73911.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77171994|gb|EAO75164.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 213

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G+ ++P+GQ EAA  L  +  +    ++LPQ  + ++P + ++
Sbjct: 89  IAFTMNYAAYFAEIFRGGIESIPKGQYEAAKVLKFSKFQTVWYIVLPQVFKIVLPSVFNE 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            + L+K+SSL   +G  DL+    T  N+  
Sbjct: 149 TITLVKDSSLVYILGVGDLLLESKTAANRDA 179


>gi|319744951|gb|EFV97281.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 224

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G+ ++P+GQ EAA  L  +  +    ++LPQ  + ++P + ++
Sbjct: 100 IAFTMNYAAYFAEIFRGGIESIPKGQYEAAKVLKFSKFQTVWYIVLPQVFKIVLPSVFNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            + L+K+SSL   +G  DL+    T  N+  
Sbjct: 160 TITLVKDSSLVYILGVGDLLLESKTAANRDA 190


>gi|226944244|ref|YP_002799317.1| polar amino acid ABC transporter inner membrane permease
           [Azotobacter vinelandii DJ]
 gi|226719171|gb|ACO78342.1| polar amino acid ABC transporter, inner membrane permease component
           [Azotobacter vinelandii DJ]
          Length = 243

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 60/111 (54%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           IGG+     F  + I +S +   F AE +R+G+ AVP+  +EAA +LG + R+    V L
Sbjct: 101 IGGANPFTPFAWVVIVISLHKGVFHAEALRAGIEAVPQVTLEAATSLGFSRRQRLWRVEL 160

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           P A+R  +P L +  + L+K ++LA A+   D+      I  Q    +E++
Sbjct: 161 PLAVRFALPSLVNNLIELVKMTALASAIAVGDITYASILIWTQRDNVLELM 211


>gi|170699412|ref|ZP_02890457.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170135668|gb|EDT03951.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 219

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           K  V S  LG+V+ L    + R    +    L   Y+S  L+ G P LV +   + +++ 
Sbjct: 23  KFAVASMALGLVVGLVVA-IMRIGSNRLVSGLAQGYVS--LMRGTPLLVQM---FVVYYG 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P LG        T+ P    ++  L+    A+++E +R  ++ + RGQ  AA +LGLTH
Sbjct: 77  LPDLG-------ITLDPTTAGIF-TLTLNAGAYLSESMRGAILGIGRGQWAAAHSLGLTH 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++ PQA+R  +P L +  ++L+K++SL   +   +L+     +I  T Q + + 
Sbjct: 129 VQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRSTQEVIAATFQPLPLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L    +Y  LS ++     R+  +++L
Sbjct: 189 LAAAALYWVLSTLLTRLQGRVETRLSL 215


>gi|298290885|ref|YP_003692824.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927396|gb|ADH88205.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 249

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 53/76 (69%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ +EI+R G+ ++P GQMEAA +LGL+   A R V+LPQA+   + PL ++ + ++K
Sbjct: 127 TAAYQSEILRGGIQSLPAGQMEAAQSLGLSRFLAYRKVILPQAIAIGLRPLGNELILMIK 186

Query: 337 NSSLAVAVGFADLVSV 352
           +S++A  +   DL+ V
Sbjct: 187 SSAIASVITVYDLMGV 202


>gi|292488872|ref|YP_003531759.1| histidine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900017|ref|YP_003539386.1| histidine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291199865|emb|CBJ46989.1| histidine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291554306|emb|CBA21657.1| Histidine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 228

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 9/186 (4%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKP 249
           VF+ +LG++ +  A +LS   + +   A+  +Y  T LI G+P LVL+ L  Y L     
Sbjct: 25  VFAVLLGLIGA--AAKLS---NSRPLAAMSEVY--TTLIRGVPDLVLMLLIFYGLQIALN 77

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  F       + P    + I L     A+  E  R   +AVP+GQ+EAA A G T  +
Sbjct: 78  QLTDFFSFAQFDIDPMVAGI-ITLGFIYGAYFTETFRGAWMAVPKGQLEAATAFGFTRSQ 136

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q     ++
Sbjct: 137 TFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPFWFAIV 196

Query: 370 WMFIYL 375
              IYL
Sbjct: 197 AGVIYL 202


>gi|213692816|ref|YP_002323402.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213524277|gb|ACJ53024.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 295

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 9/130 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I T ++ G+P +V++   Y + F  P LG F  I  S +        IA+    +A+
Sbjct: 124 LALIYTTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVLG------TIAVVMGYSAY 174

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++ K+  L
Sbjct: 175 VSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGL 234

Query: 341 AVAVGFADLV 350
              +G  D V
Sbjct: 235 ISVLGAVDAV 244


>gi|190891791|ref|YP_001978333.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190697070|gb|ACE91155.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 227

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 11/168 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           + G+ +   Y+  F+  G P LV + L Y    Q       LG + F         +   
Sbjct: 42  EIGRTITRTYV--FVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFF-----REPYWCA 94

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL+  TAA+ +EI R GL+AV   ++EAA A G++     R ++LP A+R  +P   +
Sbjct: 95  VLALTLNTAAYCSEIFRGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGN 154

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           + + ++K ++LA  +   ++  + G +I  + +A EI ++   IYL++
Sbjct: 155 EIILMIKATALASVITIMEVTGLAGKLIADSFRAFEIFIVAGAIYLAI 202


>gi|302386734|ref|YP_003822556.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302197362|gb|ADL04933.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 266

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 63/123 (51%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           Y  +S  T A++AE VR G++++  GQ E A A+G+TH +    V++PQA+R+I+P + +
Sbjct: 112 YFIVSINTGAYMAETVRGGILSIDPGQTEGAKAIGMTHFQTMVNVIMPQALRNIMPQIGN 171

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +  +K++ +   +G  +L      +        E   I M IY  L+   +  +    
Sbjct: 172 NLIINIKDTCVLSVIGVVELFYATKGVAGAYYTYFEAFGITMIIYFILTFTCSRILRHWE 231

Query: 390 AKI 392
            K+
Sbjct: 232 KKM 234


>gi|194017355|ref|ZP_03055967.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
 gi|194011223|gb|EDW20793.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
          Length = 232

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 74/136 (54%), Gaps = 19/136 (13%)

Query: 217 KALPLLYISTFLI-FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++ PL+ +  FLI FGLP L+L+A     H+D+ +     F                 S 
Sbjct: 63  RSTPLI-VQLFLIYFGLPQLLLVAGIQINHWDRVLFVMMTF-----------------SL 104

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +T A+++E+ RS   +V + Q+EAA  +G+T  +A   +++PQA    +P L +  ++L+
Sbjct: 105 HTGAYLSEVFRSAYSSVGKDQLEAAYIVGMTDTQALIRIIIPQAFLIALPNLGNYTIDLV 164

Query: 336 KNSSLAVAVGFADLVS 351
           K++++A  +G  D++ 
Sbjct: 165 KDTAIAFTIGLIDIMG 180


>gi|190894984|ref|YP_001985277.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|218516890|ref|ZP_03513730.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
 gi|190700645|gb|ACE94727.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 220

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 58/108 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     AF AE  R+ + AVPR Q++A IALGL   +    ++ P A R+ IP L + 
Sbjct: 94  MALGLNLMAFNAEAYRASIQAVPREQLDAGIALGLNPLQRVLYIVFPTAFRASIPVLLTN 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + + + S+L   V   DL+  G T+  +T + IE   +   IY ++S
Sbjct: 154 GIVIFQQSALVAIVAIQDLMYQGKTLATETYRPIETFTVVALIYFAVS 201


>gi|156973841|ref|YP_001444748.1| ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116]
 gi|156525435|gb|ABU70521.1| hypothetical protein VIBHAR_01551 [Vibrio harveyi ATCC BAA-1116]
          Length = 246

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 34/233 (14%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL---------I 238
           ++ V S +L ++L +    L++    K  +A+  LY  T +I G+P LVL         I
Sbjct: 20  EVAVLSLLLAMILGMLGA-LAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFGGQI 76

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIV 285
            L   L+     L ++     S  + E+ S    YI +S + A          A++AE  
Sbjct: 77  LLNNSLYSINETLNEW--FTASDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETF 134

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++AV +G++EAA A G++   + R VLLPQ +R  +P   + +L LLK ++L   +G
Sbjct: 135 RGAIMAVDKGELEAAKAYGMSPLMSFRRVLLPQMIRHALPGFGNNWLVLLKTTALVSIIG 194

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D+V +       T             Y++++I+   F +     + L E+K
Sbjct: 195 LEDMVRMSSLAAGTTKMPFT-------FYMAVAIIFLFFTSVSTGLLKLVERK 240


>gi|66046799|ref|YP_236640.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257506|gb|AAY38602.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330953616|gb|EGH53876.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
 gi|330972268|gb|EGH72334.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 229

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    + P  M+    L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LMAGICTLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|15604006|ref|NP_220521.1| putative glutamine transport system permease protein GLNP (glnP)
           [Rickettsia prowazekii str. Madrid E]
 gi|729594|sp|P41083|GLNP_RICPR RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|409937|gb|AAA18328.1| putative GlnP analog [Rickettsia prowazekii]
 gi|3860697|emb|CAA14598.1| PUTATIVE GLUTAMINE TRANSPORT SYSTEM PERMEASE PROTEIN GLNP (glnP)
           [Rickettsia prowazekii]
 gi|292571724|gb|ADE29639.1| Amino acid ABC transporter permease protein [Rickettsia prowazekii
           Rp22]
          Length = 218

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 23/145 (15%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL  +F+    +  PLL   + + F  P ++ I              +FN          
Sbjct: 52  RLFANFYTSIFRGTPLLVQLSIIYFAAPYIINI--------------KFNV--------- 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FM+  I+ +  + A+++E++R+G+  V +GQ EAA AL +      + ++LPQA+ +I P
Sbjct: 89  FMAGVISFALNSGAYVSEVIRAGINTVDKGQFEAAEALAIPKFLIMKDIILPQAINNIFP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            L ++ +NL+K S++   +G  DL+
Sbjct: 149 SLVNELVNLIKESAIISMLGEMDLM 173


>gi|15601512|ref|NP_233143.1| arginine transporter permease subunit ArtM [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|147672214|ref|YP_001215535.1| arginine transporter permease subunit ArtM [Vibrio cholerae O395]
 gi|153818652|ref|ZP_01971319.1| arginine ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153820681|ref|ZP_01973348.1| arginine ABC transporter, permease protein [Vibrio cholerae B33]
 gi|229506086|ref|ZP_04395595.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae BX
           330286]
 gi|229510057|ref|ZP_04399537.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           B33]
 gi|229516382|ref|ZP_04405829.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           RC9]
 gi|229522317|ref|ZP_04411733.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TM
           11079-80]
 gi|229526722|ref|ZP_04416126.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae bv.
           albensis VL426]
 gi|229528370|ref|ZP_04417761.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           12129(1)]
 gi|229605617|ref|YP_002876321.1| arginine transporter permease subunit ArtM [Vibrio cholerae
           MJ-1236]
 gi|254849918|ref|ZP_05239268.1| arginine ABC transporter [Vibrio cholerae MO10]
 gi|255746482|ref|ZP_05420429.1| arginine ABC transporter permease protein ArtM [Vibrio cholera CIRS
           101]
 gi|262152377|ref|ZP_06028510.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           INDRE 91/1]
 gi|262168599|ref|ZP_06036295.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           RC27]
 gi|262189844|ref|ZP_06048177.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae CT
           5369-93]
 gi|297580209|ref|ZP_06942136.1| arginine transporter permease subunit ArtM [Vibrio cholerae RC385]
 gi|9658179|gb|AAF96655.1| arginine ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|126510805|gb|EAZ73399.1| arginine ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126521724|gb|EAZ78947.1| arginine ABC transporter, permease protein [Vibrio cholerae B33]
 gi|146314597|gb|ABQ19137.1| arginine ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227015182|gb|ACP11391.1| arginine ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229334732|gb|EEO00218.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           12129(1)]
 gi|229336880|gb|EEO01898.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae bv.
           albensis VL426]
 gi|229340302|gb|EEO05308.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TM
           11079-80]
 gi|229346263|gb|EEO11234.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           RC9]
 gi|229352502|gb|EEO17442.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           B33]
 gi|229356437|gb|EEO21355.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae BX
           330286]
 gi|229372103|gb|ACQ62525.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           MJ-1236]
 gi|254845623|gb|EET24037.1| arginine ABC transporter [Vibrio cholerae MO10]
 gi|255736236|gb|EET91634.1| arginine ABC transporter permease protein ArtM [Vibrio cholera CIRS
           101]
 gi|262023128|gb|EEY41833.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           RC27]
 gi|262030828|gb|EEY49459.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           INDRE 91/1]
 gi|262034275|gb|EEY52682.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae CT
           5369-93]
 gi|297535855|gb|EFH74689.1| arginine transporter permease subunit ArtM [Vibrio cholerae RC385]
 gi|327485763|gb|AEA80169.1| Arginine ABC transporter, permease protein ArtM [Vibrio cholerae
           LMA3894-4]
          Length = 222

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLAVNGILTLIFRQIEKK 215


>gi|238757576|ref|ZP_04618760.1| Arginine transport system permease protein artQ [Yersinia aldovae
           ATCC 35236]
 gi|238704081|gb|EEP96614.1| Arginine transport system permease protein artQ [Yersinia aldovae
           ATCC 35236]
          Length = 238

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 18/204 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHF----HEKTG-----KALPLLYISTFLIFGLPTLVL-IA 239
           V +  LG+VL+ LFA   S  +    +  TG     + LP + +  F+ FG   L + ++
Sbjct: 19  VCALALGLVLAMLFAVGESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSELFMRLS 78

Query: 240 LKYQLH---FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             + L+   F+ P+  + N I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ
Sbjct: 79  DGFTLNLYLFELPI--KLN-IDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPVGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSTTAIFLRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIM 380
             +T +     +I   IYL ++++
Sbjct: 195 ATRTQEPFTWYVIAAAIYLVVTLL 218


>gi|227546292|ref|ZP_03976341.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|317483334|ref|ZP_07942327.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium
           sp. 12_1_47BFAA]
 gi|227213273|gb|EEI81145.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|316915216|gb|EFV36645.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium
           sp. 12_1_47BFAA]
          Length = 295

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 9/130 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I T ++ G+P +V++   Y + F  P LG F  I  S +        IA+    +A+
Sbjct: 124 LALIYTTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVLG------TIAVVMGYSAY 174

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++ K+  L
Sbjct: 175 VSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGL 234

Query: 341 AVAVGFADLV 350
              +G  D V
Sbjct: 235 ISVLGAVDAV 244


>gi|302189023|ref|ZP_07265696.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 229

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    + P  M+    L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LMAGIFTLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|297564130|ref|YP_003683103.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296848579|gb|ADH70597.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 212

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 68/123 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  + AA+ AE+ RSG+  V +GQ EAA AL L   +    ++LPQA+R  IP L + 
Sbjct: 88  VVIGVHYAAYTAEVYRSGIEGVAKGQWEAARALSLPASRTWGAIVLPQAIRRTIPALGNY 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K++ L +A+   +L++    + +   + +E   +   ++L +SI  A+ + RL  
Sbjct: 148 LIAMFKDTPLLLAISVPELLTEAQQVGSADFRIVEAYTLVGILFLLVSIPSAILIRRLER 207

Query: 391 KIA 393
           + A
Sbjct: 208 RYA 210


>gi|291302058|ref|YP_003513336.1| ectoine/hydroxyectoine ABC transporter permease EhuC
           [Stackebrandtia nassauensis DSM 44728]
 gi|290571278|gb|ADD44243.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Stackebrandtia nassauensis DSM 44728]
          Length = 246

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    A+ +EIVR  + AVP+ Q EA +AL  T  +   LV++PQA   ++PP ++ 
Sbjct: 94  VVLALNYGAYGSEIVRGAINAVPKAQWEACVALNFTFWQKLSLVIIPQAWVGMVPPFSNL 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNRL 388
            + +LK S+L   +G  DL      +  +     AI I    + IY  +S +IA  M  L
Sbjct: 154 AIQVLKGSALVSLIGLVDLTLAAQQLRTKASAEGAIVIFAALLVIYFIMSFLIAAGMRYL 213

Query: 389 NAK 391
             +
Sbjct: 214 ERR 216


>gi|317404138|gb|EFV84586.1| amino acid ABC transporter permease [Achromobacter xylosoxidans
           C54]
          Length = 219

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           ++ Y++AF+ EI R  + AVP+ Q EAA  LGL+  +    V+LPQA+R   PP     +
Sbjct: 94  MTIYSSAFLGEIWRGCIQAVPKNQWEAAECLGLSRLQRMAKVVLPQALRIATPPTVGFLV 153

Query: 333 NLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
            ++KN+S+A + +G+ +L      + N T Q
Sbjct: 154 QIIKNTSIASLVIGYPELAYNAKILNNSTFQ 184


>gi|296162378|ref|ZP_06845171.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295887411|gb|EFG67236.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 235

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F  + ++L+ Y      EIVRSGL AVP   ++AA +LG +  +    + LP AMR    
Sbjct: 102 FTCVVLSLALYNGGIAVEIVRSGLHAVPDATVDAARSLGYSRLRTFWHIQLPMAMRLSTV 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           P+T+  ++L+K SS A  V  AD++     I  +  +  E++L+    YL+L+
Sbjct: 162 PMTNNIVSLIKTSSQAAFVAVADVMYYATQITLENFRNFEVMLVVWGCYLALA 214


>gi|262167419|ref|ZP_06035126.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae RC27]
 gi|262024116|gb|EEY42810.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae RC27]
          Length = 246

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 31/206 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFN-FIGGSTVSPE---- 265
           +  +A+  LY  T +I G+P LVL+ L +   Q+  +   L  FN FI     + +    
Sbjct: 45  RWARAIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNG-LSWFNEFINQWLTARDPNHE 101

Query: 266 ---FMSLYIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              ++  Y+ +S + A          A++AE  R  ++AV +G++EAA A G++   + R
Sbjct: 102 WVAYLPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFR 161

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +LLPQ +R  IP   + +L LLK ++L   +G  D+V +       T            
Sbjct: 162 RILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFT------- 214

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
            Y++++I+   F +     + L E+K
Sbjct: 215 FYMAVAIIFLFFTSVSTGLLKLLERK 240


>gi|255745378|ref|ZP_05419327.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholera CIRS 101]
 gi|262153519|ref|ZP_06028648.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae INDRE 91/1]
 gi|255737208|gb|EET92604.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholera CIRS 101]
 gi|262030646|gb|EEY49281.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae INDRE 91/1]
 gi|327484414|gb|AEA78821.1| Arginine/ornithine ABC transporter, permease protein AotQ [Vibrio
           cholerae LMA3894-4]
          Length = 246

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 31/206 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFN-FIGGSTVSPE---- 265
           +  +A+  LY  T +I G+P LVL+ L +   Q+  +   L  FN FI     + +    
Sbjct: 45  RWARAIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNG-LSWFNEFINQWLTARDPNHE 101

Query: 266 ---FMSLYIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              ++  Y+ +S + A          A++AE  R  ++AV +G++EAA A G++   + R
Sbjct: 102 WVAYLPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFR 161

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +LLPQ +R  IP   + +L LLK ++L   +G  D+V +       T            
Sbjct: 162 RILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFT------- 214

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
            Y++++I+   F +     + L E+K
Sbjct: 215 FYMAVAIIFLFFTSVSTGLLKLLERK 240


>gi|303256339|ref|ZP_07342355.1| general amino acid ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|330999034|ref|ZP_08322759.1| general L-amino acid transport system permease protein AapM
           [Parasutterella excrementihominis YIT 11859]
 gi|302861068|gb|EFL84143.1| general amino acid ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|329575776|gb|EGG57302.1| general L-amino acid transport system permease protein AapM
           [Parasutterella excrementihominis YIT 11859]
          Length = 366

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F  + I +  +  A++AE +R GL  +P+GQ EAA +LGL+  +    V+LPQA+ ++IP
Sbjct: 222 FWRIVIGIVLFQTAYMAETIRGGLQTIPKGQYEAAASLGLSKYQIYTSVILPQALVTVIP 281

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
              +  L+   ++SL   V   DL  
Sbjct: 282 AFVNNLLSTFMDTSLVTIVSMYDLTG 307


>gi|134300076|ref|YP_001113572.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum reducens MI-1]
 gi|134052776|gb|ABO50747.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 255

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 52/77 (67%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+I++ +GQ EAA A+G+ H +    V++PQ +R+I+P   ++++
Sbjct: 108 VSINTGAYMSEIVRGGIISIDKGQFEAAHAIGMNHVQTMFNVIIPQVIRNILPATGNEFI 167

Query: 333 NLLKNSSLAVAVGFADL 349
             +K++S+   +   +L
Sbjct: 168 INIKDTSVLNVISVTEL 184


>gi|323698677|ref|ZP_08110589.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458609|gb|EGB14474.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 222

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 8/125 (6%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y + F  P LG    +  S     F+++ + L  Y+     EI+R+G+ ++PRGQ+EAA 
Sbjct: 74  YFIFFGLPALG----VKLSGWEASFLAMALNLGAYST----EIIRAGVQSIPRGQVEAAE 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +L L+  +  R V+L  A++++ P L SQ + ++  SS+   V   +L      I ++T 
Sbjct: 126 SLALSRWQTFRFVILRPALKNVWPALCSQIIIVMLGSSVCSQVAAQELTYTANLIQSRTF 185

Query: 362 QAIEI 366
           +A EI
Sbjct: 186 RAFEI 190


>gi|317492650|ref|ZP_07951077.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919400|gb|EFV40732.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 238

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRAVPHGEIEAANAYGFSRFKLYRCIILPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ V   I + T Q      I   +YL +S ++I LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKVARDINSATYQPFTAFGIAAVLYLIISYVLIRLF 221


>gi|167585825|ref|ZP_02378213.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 229

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 13/152 (8%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGST- 261
           A +LSR+   +    +  +Y  T LI G+P LVL+ L  Y L      L Q   + G   
Sbjct: 37  AAKLSRN---RVTNGVGTVY--TTLIRGVPDLVLMLLLFYSLQI---WLNQLTDLAGWDQ 88

Query: 262 --VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             + P F++  + L     A+  E  R   ++VPRGQ+EA  A G+T  +    ++ PQ 
Sbjct: 89  IDIDP-FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTSWQVFSRIMFPQM 147

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           MR  +P + + +  L+K+++L   +G AD+V 
Sbjct: 148 MRFALPGIGNNWQVLVKSTALVSIIGLADVVK 179


>gi|322373494|ref|ZP_08048030.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
 gi|321278536|gb|EFX55605.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
          Length = 225

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 57/106 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I  + +  A + ++VR  + ++PR Q E+  ALGLT+ +    V++PQ +R ++P 
Sbjct: 93  LSAIIVFTLWGTAEMGDLVRGSITSLPRHQFESGRALGLTNSQLYTYVIIPQVLRRLLPQ 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 153 AINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|258620246|ref|ZP_05715285.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262164885|ref|ZP_06032623.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus
           VM223]
 gi|258587604|gb|EEW12314.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262027265|gb|EEY45932.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus
           VM223]
          Length = 222

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F +++ AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAMF-ALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YL+++  + L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLTVNGALTLLFRQIEKK 215


>gi|227501171|ref|ZP_03931220.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
 gi|227216572|gb|EEI81976.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
          Length = 521

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 63/109 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++E+VR G+ ++ +GQ EA  A+G+TH +    V+LPQ + +I+P L ++++
Sbjct: 386 VSINTGAYLSEVVRGGINSINKGQFEACKAIGMTHFQTMIHVILPQTILTILPSLGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L  +  ++   T Q     LI   IY  L+  I
Sbjct: 446 INIKDTSVLNVISVTELFFMSKSVAGSTYQYFPTYLITAVIYFVLTFTI 494


>gi|145599620|ref|YP_001163696.1| arginine transporter permease subunit ArtQ [Yersinia pestis
           Pestoides F]
 gi|145211316|gb|ABP40723.1| arginine transport system permease protein [Yersinia pestis
           Pestoides F]
          Length = 238

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 10/169 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLH-FDKPV-LGQFNFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+++        L+ F+ P+ L   NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLMMLSDGFTLNLYLFELPIKLNLDNF----EVSP-FLCAVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +A+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALALLYSAYASQTLRGALKAVPIGQWESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAAAIYLVVTLL 218


>gi|29831771|ref|NP_826405.1| amino acid ABC transporter integral membrane protein [Streptomyces
           avermitilis MA-4680]
 gi|29608888|dbj|BAC72940.1| putative polar amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 216

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 49/81 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  + + + AE+ R+G+  VP GQ EAA AL L   +    V+LPQA+R ++P L + 
Sbjct: 93  IGLGLHYSTYTAEVYRAGIDGVPVGQWEAATALSLPRSRTWTAVILPQALRRVVPALGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + +LK+S + + +G  +++ 
Sbjct: 153 VIAMLKDSPMLMTIGVLEMLG 173


>gi|322833012|ref|YP_004213039.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168213|gb|ADW73912.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 217

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 13/170 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+S  L+ G P +V +   + + F  P LG    +GG       ++  +A+   + A++
Sbjct: 57  LYVS--LMRGTPAIVQL---FVVFFTLPRLG----LGGQ----PMLAAVLAIGLNSGAYV 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R     V RGQ EAA  LGL        V+ PQ +R+ +P L +++  LLK + LA
Sbjct: 104 AEILRVNQSLVTRGQREAARTLGLNRWLTWWYVINPQVIRASLPMLVNEFTILLKTTPLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   +L   G  +I +T  A +++L+    YL +++ +   +  L AK
Sbjct: 164 SVVALTELTYAGQIVIARTYDATQVLLLVSAGYLLIALPLISAVRHLEAK 213


>gi|320458985|dbj|BAJ69606.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 311

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 9/130 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I T ++ G+P +V++   Y + F  P LG F  I  S +        IA+    +A+
Sbjct: 140 LALIYTTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVLG------TIAVVMGYSAY 190

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++ K+  L
Sbjct: 191 VSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGL 250

Query: 341 AVAVGFADLV 350
              +G  D V
Sbjct: 251 ISVLGAVDAV 260


>gi|261210505|ref|ZP_05924798.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260840290|gb|EEX66861.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 225

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 6/155 (3%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + + G P LV      QL+     + QF  + G+     +    +A    T+A+ AEIVR
Sbjct: 58  YFLRGTPLLV------QLYLIYYGMDQFFPVKGTLWEHAWFCALVAFILNTSAYTAEIVR 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             +  +P+G++EAA A G++  +  + ++LP A+R  +P  +++ + +L  S++A  V  
Sbjct: 112 GAMNGLPKGEVEAAKAYGMSSWQTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTI 171

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            DL      + ++     E  L     Y+SL+ +I
Sbjct: 172 MDLTGAARLVNSRYYAPFEAFLSAGLFYMSLTFII 206


>gi|315180584|gb|ADT87498.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 246

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 8/137 (5%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G+    A R +LLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMGAALAFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   + +L LLK ++L   +G  D+V +       T             Y+++SI+ 
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKMPFT-------FYMAVSIIF 223

Query: 382 ALFMNRLNAKIALKEKK 398
            LF +     + + E+K
Sbjct: 224 LLFTSVSTGLLKIVERK 240


>gi|218671002|ref|ZP_03520673.1| polar amino acid ABC transporter permease [Rhizobium etli GR56]
          Length = 255

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 8/153 (5%)

Query: 243 QLHFDKPVLGQFN----FIGGSTVSPEFMSL---YIALSCYTAAFIAEIVRSGLIAVPRG 295
           QL F    LGQF        G T  P   ++    ++LS +  AF  EI R+G+ A+P+ 
Sbjct: 95  QLLFFYFALGQFTPTITGTDGWTEEPVISNIGWAIVSLSFFAGAFNIEIFRAGIEAIPQT 154

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
             EA  ALG+   +    V+LP A+R  +P L +  +NL+K ++ A+A+   +L+    +
Sbjct: 155 TKEACEALGMNRLQTYAYVVLPLALRVSLPALNNNLVNLVKTTTQAIAIAVPELLYQMVS 214

Query: 356 IINQTGQAIEIILIWMFI-YLSLSIMIALFMNR 387
           I N    A    +  +F+ Y+ L   +AL MNR
Sbjct: 215 IWNDYASAQNAAMTVLFVSYILLVGALALAMNR 247


>gi|157362893|ref|YP_001469660.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157313497|gb|ABV32596.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 224

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 57/95 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+  +  +++E+ RSGL+A+ +GQ EAA ALG++      L++LPQ ++  +P
Sbjct: 86  FETAVVVLTITSTVYLSEVFRSGLLAIDKGQFEAADALGMSFANKLFLIILPQVLQITLP 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +  Q +  +K++S+   +G A++V     ++  T
Sbjct: 146 SIVGQIVLTIKDTSIVSLIGMAEIVRTSRQVMQIT 180


>gi|289677304|ref|ZP_06498194.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 201

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +    D      P+LG  ++I    + P  M+    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LMAGICTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG
Sbjct: 114 RGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|262403803|ref|ZP_06080361.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC586]
 gi|262350307|gb|EEY99442.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC586]
          Length = 222

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF +I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEWIRESVLWVWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKIATLRVLLPYALRRAVPTYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLTVNGILTLIFRQIEKK 215


>gi|163802097|ref|ZP_02195993.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159174238|gb|EDP59046.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 246

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 26/161 (16%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVL---------IALKYQLHFDKPVLGQFNFIGGSTVSP 264
           K  +A+  LY  T +I G+P LVL         I L   L+     L ++ FI  S  S 
Sbjct: 45  KWARAIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNSLYSINETLNEW-FIA-SDPSH 100

Query: 265 EFMSL---YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           E+ S    YI +S + A          A++AE  R  ++AV +G++EAA A G++   + 
Sbjct: 101 EWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMSPLMSF 160

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           R +LLPQ +R  +P   + +L LLK ++L   +G  D+V V
Sbjct: 161 RRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRV 201


>gi|153844579|ref|ZP_01993675.1| membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|149745208|gb|EDM56459.1| membrane protein [Vibrio parahaemolyticus AQ3810]
          Length = 241

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 27/185 (14%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL---------I 238
           ++ V S +L ++L +    L++    K  +A+  LY  T +I G+P LVL         I
Sbjct: 20  EVAVLSLLLAVILGMLGA-LAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFGGQI 76

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIV 285
            L   L+     L ++     S  + E+ S    YI +S + A          A++AE  
Sbjct: 77  LLNNSLYSINETLNEW--FASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETF 134

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +G
Sbjct: 135 RGAIMAVDKGELEAAKAYGMSPVLSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIG 194

Query: 346 FADLV 350
             D+V
Sbjct: 195 LEDMV 199


>gi|168180075|ref|ZP_02614739.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226948680|ref|YP_002803771.1| amino acid ABC transporter permease [Clostridium botulinum A2 str.
           Kyoto]
 gi|182668898|gb|EDT80874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226841764|gb|ACO84430.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
          Length = 221

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 58/85 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTSIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGT 355
           +++++K S+LA  +G  ++++V  +
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQS 180


>gi|167911825|ref|ZP_02498916.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 112]
          Length = 229

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 7/213 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V S    ++L L    +++  H +  +A+   Y  T LI  +P LVL+ L +  +  
Sbjct: 19  ELSVLSLAAAVLLGLVGA-VAKLSHNRVLRAIATGY--TTLIRSMPDLVLMLLLF--YSI 73

Query: 248 KPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  L QF + +    +  + F++  + L     A+  E  R   +AVPRGQ+EA  A G+
Sbjct: 74  QIWLNQFTDLMSWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGM 133

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         T     
Sbjct: 134 NGMRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 193

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            IL+   IYL+++    L + +L  + ++  + 
Sbjct: 194 FILVAALIYLAITTASNLVLGQLEKRYSIGVRH 226


>gi|317048960|ref|YP_004116608.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950577|gb|ADU70052.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 228

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 19/167 (11%)

Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLI-----ALKYQL 244
           S VL +VL L     +LSR       + L +L+   T LI G+P LVL+      L+  L
Sbjct: 23  SVVLAVVLGLIGAGAKLSRS------RPLAMLFEGYTTLIRGVPDLVLMLLIFYGLQIAL 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +     LG   F     + P    + I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 77  NALTDALGVAQF----DIDPMVAGI-ITLGFIYGAYFTETFRGAFLAVPKGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V 
Sbjct: 132 FTGSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVK 178


>gi|218463668|ref|ZP_03503759.1| octopine ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 150

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 4/140 (2%)

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G   FIG     P F++  +AL   +AA+ AE+ R    +V RG++EAA A+G+      
Sbjct: 6   GYQGFIG----MPAFLTGTLALGVVSAAYQAEVFRGAYRSVARGEIEAASAVGMRRWPKF 61

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++ P  +R  IP L + +  +LK S+L    G  +L+         T +  E  L+ +
Sbjct: 62  RRIVAPLVLRYAIPGLGNTWQLVLKESALVSVTGLVELLRQSQIAAGSTRRPFEFYLMAV 121

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            +YL ++   ++   R+ A+
Sbjct: 122 VLYLVITWFSSILFRRMEAR 141


>gi|167563477|ref|ZP_02356393.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           oklahomensis EO147]
          Length = 229

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 7/203 (3%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S    I L L    +++  H +  +A+   Y  T LI  +P LVL+ L +  +  +  
Sbjct: 22  VLSLAAAIALGLIGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIW 76

Query: 251 LGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           L QF + +    +  + F++  + L     A+  E  R   ++VPRGQ+EA  A G++  
Sbjct: 77  LNQFTDLMSWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMSGM 136

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         T      IL
Sbjct: 137 RVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFIL 196

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           +   IYL+++ +  L + +L  +
Sbjct: 197 VAALIYLAITTVSNLVLKQLEKR 219


>gi|54296523|ref|YP_122892.1| hypothetical protein lpp0554 [Legionella pneumophila str. Paris]
 gi|53750308|emb|CAH11702.1| hypothetical protein lpp0554 [Legionella pneumophila str. Paris]
          Length = 215

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    ++A+ AEI+RSG+ ++P+GQ EAA+ L +      + ++LPQ +++I P + ++
Sbjct: 88  VAFGLNSSAYFAEILRSGIESLPKGQFEAALTLQIPTFYLWKDIILPQVIKNIFPAMINE 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL+    T+  Q       + I  F Y SL +++     ++  
Sbjct: 148 MIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFYYYSLVLLLEALGKKIEK 207

Query: 391 K 391
           +
Sbjct: 208 R 208


>gi|24379379|ref|NP_721334.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|290580619|ref|YP_003485011.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24377308|gb|AAN58640.1|AE014934_4 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|254997518|dbj|BAH88119.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 224

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 53/84 (63%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +I  S  T   ++EI+RS ++ V +GQ+EAA ++GLT  ++   ++ PQA+RS +P L +
Sbjct: 101 FIIFSLMTTGSLSEILRSAILTVDKGQLEAAQSIGLTTTQSYLRIIFPQALRSALPNLCN 160

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
             +N++K +SL   +   D+ ++ 
Sbjct: 161 LVINIVKGTSLVFVMTVKDITAIA 184


>gi|15600347|ref|NP_253841.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107104254|ref|ZP_01368172.1| hypothetical protein PaerPA_01005328 [Pseudomonas aeruginosa PACS2]
 gi|116053301|ref|YP_793625.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894254|ref|YP_002443123.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238143|ref|ZP_04931466.1| hypothetical protein PACG_04265 [Pseudomonas aeruginosa C3719]
 gi|9951455|gb|AAG08539.1|AE004928_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115588522|gb|ABJ14537.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170074|gb|EAZ55585.1| hypothetical protein PACG_04265 [Pseudomonas aeruginosa C3719]
 gi|218774482|emb|CAW30299.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 231

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F KP L    F  G+          +AL     A+  E+ R  L+++PRG  EA  ALGL
Sbjct: 86  FGKPDLALSPFAAGT----------LALGLCFGAYATEVFRGALLSIPRGHREAGQALGL 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    ++LPQ  R  +P L + YL LLK+++L   +   +++       N T +   
Sbjct: 136 SPGRIFWRIVLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFT 195

Query: 366 IILIWMFIYLSLS--IMIAL-FMNR 387
             +    IYLSL+  IM+AL F+ R
Sbjct: 196 FYMTAAAIYLSLTVVIMVALHFLER 220


>gi|260768889|ref|ZP_05877823.1| histidine ABC transporter permease protein HisM [Vibrio furnissii
           CIP 102972]
 gi|260616919|gb|EEX42104.1| histidine ABC transporter permease protein HisM [Vibrio furnissii
           CIP 102972]
 gi|315180583|gb|ADT87497.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio furnissii NCTC 11218]
          Length = 225

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 59/105 (56%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++  K  R V+LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSTWKTYRRVVLPSALRRALPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y+SL+ +I
Sbjct: 162 GSAVAGIVTIMDLTGAARLVNSRYYAPFESFLTAGLFYMSLTFII 206


>gi|114764750|ref|ZP_01443933.1| ABC amino acid transporter, inner membrane subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114542799|gb|EAU45821.1| ABC amino acid transporter, inner membrane subunit [Roseovarius sp.
           HTCC2601]
          Length = 243

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 55/95 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S+ +A+S +  A  A+I+R+GL +V +GQ E A A      K   L++LPQAM  I+P
Sbjct: 84  FWSVCVAISIWGGANGAQILRAGLHSVGQGQRETAAAFNFGPVKTLFLIVLPQAMPVILP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P  S    +++ +SL   VG  +L+  G  +I QT
Sbjct: 144 PYISLMTAVVQATSLGAVVGATELLRAGQILIEQT 178


>gi|89072735|ref|ZP_01159300.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium sp. SKA34]
 gi|89051555|gb|EAR57009.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium sp. SKA34]
          Length = 229

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 6/161 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+      QL+     L Q   + G+     +    +A    TAA+ AEI+R  + 
Sbjct: 62  GTPLLI------QLYLIYYGLSQVIDVQGTMWQEAWFCALVAFILNTAAYTAEIIRGSIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+G++EAA A G++  +A R ++LP A+R  +P  +++ + ++  S++A  V   DL 
Sbjct: 116 SMPQGEIEAAKAYGMSPFQAFRRIILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                + ++     E  L     Y+ L+  I     +L A+
Sbjct: 176 GAARIVNSRYYAPFESFLFAGLCYMVLTFAIIWVFKKLEAR 216



 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T W+    ++   I    +G  R S+NKL+A+    Y+  FR  P L+ ++ +Y
Sbjct: 14  LEGFYTTVWMVTVSLVIGLICAIPIGMMRNSSNKLIAFPAWAYIYFFRGTPLLIQLYLIY 73

Query: 150 KSVLSVLPI 158
             +  V+ +
Sbjct: 74  YGLSQVIDV 82


>gi|325517961|gb|EGC97785.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 230

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 25/233 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSRH---FHEKTGKALPLL---YI 224
           S P L        K  V S V G    +VL++   R S     F      AL  L   Y+
Sbjct: 10  SLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQSEALEGFERIWVNALAWLARAYV 69

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 70  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     +I  T Q + + L    +Y  L  ++         +++L  +
Sbjct: 177 TVTELLRSAQEMIAATYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPAR 229


>gi|284007898|emb|CBA73837.1| arginine ABC transporter, permease protein [Arsenophonus nasoniae]
          Length = 225

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 7/149 (4%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P   QF+FI      P F  ++     Y A   ++ +R  L A+P GQ ++  ALGL   
Sbjct: 80  PQNNQFDFI------PFFCGVFALALLYAAY-ASQTLRGALKAIPSGQWQSGQALGLNRN 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
                +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I+N+T +     L
Sbjct: 133 VIFLRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIVNRTQEPFTWYL 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I   IYL+++++    + R+  +    E+
Sbjct: 193 IVALIYLAITLVSQFILRRIELRTTQFER 221


>gi|260912990|ref|ZP_05919475.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260632980|gb|EEX51146.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 223

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 68/126 (53%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AA+ ++ +R  + A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+
Sbjct: 95  ALSIIFAAYASQSLRGAIQAIPLGQWESGAALGLSRSYTFVHIVMPQVWRHALPGLSNQW 154

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +G  DL+     +   T Q      I   +YL+++++  + + +L  +
Sbjct: 155 LVLLKDTALVSLIGVDDLMRQAELVNANTHQPFTWYGIAALLYLAITLISQVIIRKLEYR 214

Query: 392 IALKEK 397
               E+
Sbjct: 215 FTRFER 220


>gi|227327248|ref|ZP_03831272.1| histidine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 238

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA  V   D++ +   I   T Q      I   IYL++S ++I LF
Sbjct: 167 VILMLHSTALAFTVTVPDILKIARDINAATYQPFYAFGIAAVIYLAISFVLIGLF 221


>gi|238753466|ref|ZP_04614829.1| Arginine transport system permease protein artQ [Yersinia ruckeri
           ATCC 29473]
 gi|238708419|gb|EEQ00774.1| Arginine transport system permease protein artQ [Yersinia ruckeri
           ATCC 29473]
          Length = 238

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 90/169 (53%), Gaps = 10/169 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+++      L + L F+ PV  + N I    VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLMMLSDGFTLNFYL-FELPV--KLN-IDTFEVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +A+ ++ +R  L AVP GQ E+  ALG++       +++PQ  R  +P L +Q+
Sbjct: 110 ALALLYSAYASQTLRGALKAVPIGQWESGQALGMSQTAIFFRLIMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLVVTLL 218


>gi|163748032|ref|ZP_02155354.1| putative transmembrane permease component of ABC transporter
           [Oceanibulbus indolifex HEL-45]
 gi|161378692|gb|EDQ03139.1| putative transmembrane permease component of ABC transporter
           [Oceanibulbus indolifex HEL-45]
          Length = 235

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 3/125 (2%)

Query: 258 GGSTV--SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           GG+ +  SP F +   AL+    AF  E++R    ++  GQMEA  A+G++ RK    + 
Sbjct: 93  GGTNIEFSP-FAAGVTALAMVFGAFAGEVLRGAFQSLDEGQMEAGRAIGMSPRKIFFRIR 151

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ  R  +P L + ++N+LK+++L   +   DL+ +    +  T Q     L+   +Y 
Sbjct: 152 LPQVWRFALPGLGNLWINMLKDTALVSIIALDDLMRMTKVAVGVTKQPFTFYLLACLVYW 211

Query: 376 SLSIM 380
           +L ++
Sbjct: 212 ALCVL 216


>gi|50122415|ref|YP_051582.1| putative amino acid ABC transporter permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|261822706|ref|YP_003260812.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|49612941|emb|CAG76392.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium atrosepticum SCRI1043]
 gi|261606719|gb|ACX89205.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 222

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 24/155 (15%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP+L      ++L   +  L               +++ I L  Y+     EI+R
Sbjct: 75  FIVFGLPSL-----GWKLTAGEAAL---------------LAMLINLGAYST----EIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+   P+GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V +
Sbjct: 111 AGIQVTPKGQWEAARVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSY 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++T  + E+ L     YL LS+++
Sbjct: 171 EELTFAANLIQSRTFLSFEVYLATTLCYLVLSVLM 205


>gi|28897774|ref|NP_797379.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837342|ref|ZP_01990009.1| membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|260363801|ref|ZP_05776556.1| membrane protein [Vibrio parahaemolyticus K5030]
 gi|260876939|ref|ZP_05889294.1| membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|260897919|ref|ZP_05906415.1| membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|260903454|ref|ZP_05911849.1| membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|28805987|dbj|BAC59263.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149749373|gb|EDM60146.1| membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|308085455|gb|EFO35150.1| membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308093658|gb|EFO43353.1| membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308110352|gb|EFO47892.1| membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308113882|gb|EFO51422.1| membrane protein [Vibrio parahaemolyticus K5030]
 gi|328473250|gb|EGF44098.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 246

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 92/185 (49%), Gaps = 27/185 (14%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL---------I 238
           ++ V S +L ++L +    L++    K  +A+  LY  T +I G+P LVL         I
Sbjct: 20  EVAVLSLLLAVILGMLGA-LAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFGGQI 76

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIV 285
            L   L+     L ++     S  + E+ S    YI +S + A          A++AE  
Sbjct: 77  LLNNSLYSINETLNEW--FASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETF 134

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +G
Sbjct: 135 RGAIMAVDKGELEAAKAYGMSPVLSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIG 194

Query: 346 FADLV 350
             D+V
Sbjct: 195 LEDMV 199


>gi|152988488|ref|YP_001351210.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|254243965|ref|ZP_04937287.1| hypothetical protein PA2G_04795 [Pseudomonas aeruginosa 2192]
 gi|296392008|ref|ZP_06881483.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|126197343|gb|EAZ61406.1| hypothetical protein PA2G_04795 [Pseudomonas aeruginosa 2192]
 gi|150963646|gb|ABR85671.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 231

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F KP L    F  G+          +AL     A+  E+ R  L+++PRG  EA  ALGL
Sbjct: 86  FGKPDLALSPFAAGT----------LALGLCFGAYATEVFRGALLSIPRGHREAGQALGL 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    ++LPQ  R  +P L + YL LLK+++L   +   +++       N T +   
Sbjct: 136 SPGRIFWRIVLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFT 195

Query: 366 IILIWMFIYLSLS--IMIAL-FMNR 387
             +    IYLSL+  IM+AL F+ R
Sbjct: 196 FYMTAAAIYLSLTVVIMVALHFLER 220


>gi|331007195|ref|ZP_08330406.1| general amino acid ABC transporter, permease protein [gamma
           proteobacterium IMCC1989]
 gi|330418990|gb|EGG93445.1| general amino acid ABC transporter, permease protein [gamma
           proteobacterium IMCC1989]
          Length = 368

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F  G+ V  + + ++I L  + + ++AE+ R G  A+P+GQ EAA ++GL++ +   L++
Sbjct: 223 FPEGTNVD-KLIRVWIVLILFMSGYMAEVFRGGFQAIPQGQYEAADSIGLSYWQKNLLII 281

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           LPQ ++  +P + + ++ L KN++  + +G  +++S
Sbjct: 282 LPQNIKISMPNILATFIMLFKNTTFLLIIGIFEILS 317


>gi|237750380|ref|ZP_04580860.1| glutamine ABC transporter permease GlnP [Helicobacter bilis ATCC
           43879]
 gi|229373910|gb|EEO24301.1| glutamine ABC transporter permease GlnP [Helicobacter bilis ATCC
           43879]
          Length = 228

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 67/126 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F    I +     +++AE  R GL +V   Q+E+A++LG +  +  R V+ PQ++   
Sbjct: 95  PNFWCAVIGVIFLGGSYMAESFRLGLESVRHSQIESALSLGFSKMQILRYVIFPQSIPLS 154

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP + +  L L+K +S+   +   DL+S+   +I+  GQ  E + + +  YL + + ++ 
Sbjct: 155 IPSICANVLFLIKETSIVGVIALQDLMSIAKEVISNYGQTNEALFLLIVAYLIVLLPLSF 214

Query: 384 FMNRLN 389
             ++L 
Sbjct: 215 IFSKLE 220


>gi|219871255|ref|YP_002475630.1| arginine transporter permease subunit ArtQ [Haemophilus parasuis
           SH0165]
 gi|219691459|gb|ACL32682.1| arginine transporter permease subunit ArtQ [Haemophilus parasuis
           SH0165]
          Length = 209

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 6/171 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVR 286
           L+ GLP ++++ L Y   F  P +     I G  V    F    +ALS   A++ ++ +R
Sbjct: 41  LLRGLPEILVVFLIY---FGAPEV--LEMITGEYVELGAFGCGVVALSIIFASYASQSLR 95

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G 
Sbjct: 96  GAIQAIPLGQWESGAALGLSRGYTFVNIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGV 155

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++     I   T Q          IYL ++++  + + +L  +    E+
Sbjct: 156 HDIMRQTELINTSTHQPFTWYGTAALIYLGVTLVSQVIIRKLELRFTRFER 206


>gi|91777480|ref|YP_552688.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91690140|gb|ABE33338.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 227

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 84/158 (53%), Gaps = 13/158 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G P LV +   + L F  P++G    +GG       ++  + L   + A+ 
Sbjct: 56  LYIS--FMRGTPALVQL---FVLFFALPLIG----LGGR----PMLAAALTLGLNSGAYT 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R  L  +  GQ EAAIALG+   +    + +PQ +++ +P L +++  LLK + LA
Sbjct: 103 AEILRGNLRVITPGQYEAAIALGMAPSRIALRIAMPQMLKASLPALINEFTILLKTTPLA 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             V   +L   G  +I +T  + +++L+    YL++++
Sbjct: 163 SVVAVTELTYAGQMVIARTYTSAQVMLLVSVGYLAVAL 200


>gi|16262718|ref|NP_435511.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|307312880|ref|ZP_07592509.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|14523344|gb|AAK64923.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306899394|gb|EFN30027.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 218

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++AF+  I  S L A+P+ Q E+A AL LT  K  R V+ PQA+R  +P      + ++K
Sbjct: 96  SSAFLGAIWESALRAIPKAQWESADALALTPYKTLRFVIAPQAIRLALPSTVGFLVQIIK 155

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI---MIALFMNRLNA 390
            +SLA  +GF ++   G  + N T + ++  L    +Y ++      ++L++ R  A
Sbjct: 156 QTSLASIIGFIEITRAGQLVSNATFEPLKAFLSVAALYFAVCFPLTQLSLWLERRTA 212


>gi|330816077|ref|YP_004359782.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           gladioli BSR3]
 gi|327368470|gb|AEA59826.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           gladioli BSR3]
          Length = 229

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 8/177 (4%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFI 281
           T LI  +P LVL+ L +   Q+  +       + +G   +  + F++  + L     A+ 
Sbjct: 54  TTLIRSVPDLVLMLLLFYSIQIWLNDLT----DLLGWDQIDIDPFVAGVLTLGFIYGAYF 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   ++VPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K ++L 
Sbjct: 110 TETFRGAFLSVPRGQLEAGAAYGMSGLRVFTRILFPQMMRFALPGIGNNWQVLVKATALV 169

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G AD+V         T      IL+   IYL+++ +  L + +L  + +L  + 
Sbjct: 170 SIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNLVLRQLERRYSLGVRH 226



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 36/69 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   I  G V T  L+   +  A I+G L    +LSAN+++  I   Y  + R++P LV
Sbjct: 5   GFGPVIWAGTVQTIELSVLSLAAAVILGLLGAVAKLSANRVMRGIGTAYTTLIRSVPDLV 64

Query: 144 VIFFLYKSV 152
           ++  L+ S+
Sbjct: 65  LMLLLFYSI 73


>gi|10954672|ref|NP_066607.1| hypothetical protein pRi1724_p027 [Agrobacterium rhizogenes]
 gi|10567336|dbj|BAB16145.1| riorf26 [Agrobacterium rhizogenes]
          Length = 220

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 104/206 (50%), Gaps = 17/206 (8%)

Query: 195 VLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           V+G VL+ F    RLSR+      + L  +++   +I  +P   +IAL + L++    L 
Sbjct: 26  VIGCVLACFLVMARLSRN---NVSRFLSWIFLE--IIRCIP---MIALLFLLYYG---LS 74

Query: 253 QFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           QF+ +  S   P          IALS    A+I+EI R G+++VP G++ AA + G    
Sbjct: 75  QFSAVRSSIFWPILREPLWCAIIALSLKACAYISEIYRIGIMSVPEGEILAARSFGFKGF 134

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R +++  A R ++P L+++++ L+K SSLA  +   D+  +   + ++  Q +  + 
Sbjct: 135 RLYRSIIVSHAARIVLPALSNEFVVLIKASSLASLITLMDITGLASGLASELFQPLPALT 194

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
           +    YL  + ++      L  ++A+
Sbjct: 195 VAAIYYLVFNTLVLSAFQHLERRLAI 220


>gi|32490937|ref|NP_871191.1| hypothetical protein WGLp188 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166143|dbj|BAC24334.1| gltK [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 225

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 92/168 (54%), Gaps = 17/168 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S +LG++ ++ +      F++       +L+  + +I G+P   LI + + ++F  P+
Sbjct: 40  IISLLLGVIFTMISWCFPNFFYK-------ILFFLSEIIRGIP---LIFIIFWIYFTFPL 89

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 I  S +S E +++ IAL  + +  I     S + ++P+GQ EA ++ GL + + 
Sbjct: 90  ------IFSSYISQE-LTIIIALVWFNSLAIMHSTLSSIKSLPKGQTEAGLSEGLNYFQV 142

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
             ++LLPQ++++ IP  +   ++L+K++SLA  +   +L ++G  + N
Sbjct: 143 FWIILLPQSIKNAIPSWSVLIISLVKDTSLAFILNVPELTTIGSQLNN 190


>gi|237731568|ref|ZP_04562049.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
 gi|226907107|gb|EEH93025.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
          Length = 308

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 77/134 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+
Sbjct: 146 QFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAGRRTLRIILPQALRTIL 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ ++L K +++   +   +L      I N+T + I ++++    YL ++ +++L 
Sbjct: 206 PAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITSVLSLI 265

Query: 385 MNRLNAKIALKEKK 398
            + +   +A  E++
Sbjct: 266 QHLVERALARSERR 279


>gi|78063224|ref|YP_373132.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77971109|gb|ABB12488.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 243

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 48/86 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L     A+  E  R   +AVPRGQ+EA  A G++  +  R +L PQ MR  +P
Sbjct: 108 FVAGVITLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMSGWRVFRRILFPQMMRFALP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            + + +  L+K ++L   +G AD+V 
Sbjct: 168 GIGNNWQVLVKATALVSIIGLADVVK 193


>gi|320530103|ref|ZP_08031173.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
 gi|320137536|gb|EFW29448.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
          Length = 235

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 1/124 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             V P + +++I  +  + A + E  RS L+A+P+GQ+EA +A GL+       V+LPQA
Sbjct: 97  DAVDPFWYAVFI-FTINSIALLTEAFRSALLAIPKGQLEAGLASGLSAPATYLHVILPQA 155

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +   +P + +  +NL+K +SLA  +   D+++VG    +     IE  L    +YL L  
Sbjct: 156 LVVALPSICNITVNLIKGTSLAFLMTVKDIMAVGKIAASYGYNYIEAYLDVFVVYLVLCT 215

Query: 380 MIAL 383
           ++ L
Sbjct: 216 IVQL 219


>gi|293605310|ref|ZP_06687696.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292816366|gb|EFF75461.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 280

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQL 244
           N +I V +  LG +L L    LS        +   L+     L    P LVL+    Y  
Sbjct: 76  NIQISVLAMALGTLLGLVVGALSLSPSRLVRR---LMRAYVLLFRNAPILVLVYFTTYVF 132

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            FD       N  G     P+++ + I L    +A +AEI R  + ++P  Q EAA +L 
Sbjct: 133 PFD------INLAGWRLPFPDWIKVVIGLGLPASANVAEIFRGAIQSIPSAQWEAAQSLA 186

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
               +  R+V+LPQ +R ++P   +   ++  ++SLA  VG  DLV       N   ++ 
Sbjct: 187 FRRTQIFRMVVLPQCVRRMLPSWMNLLASITMSTSLASLVGVHDLVDTATVASNTVARSD 246

Query: 365 EIILI 369
             IL+
Sbjct: 247 FTILV 251



 Score = 40.0 bits (92), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 13/96 (13%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++ A+L G      ++   M   T++G +VGA  LS ++LV  + R YV +FRN P LV
Sbjct: 64  QWSPALLRGLGMNIQISVLAMALGTLLGLVVGALSLSPSRLVRRLMRAYVLLFRNAPILV 123

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           +++F              + V PF + L    L FP
Sbjct: 124 LVYF-------------TTYVFPFDINLAGWRLPFP 146


>gi|90579332|ref|ZP_01235142.1| putative ABC-type arginine/histidine transport system, permease
           component [Vibrio angustum S14]
 gi|90440165|gb|EAS65346.1| putative ABC-type arginine/histidine transport system, permease
           component [Vibrio angustum S14]
          Length = 229

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 6/161 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+      QL+     L Q   + G+     +    +A    TAA+ AEI+R  + 
Sbjct: 62  GTPLLI------QLYLIYYGLSQVINVQGTMWQEAWFCALVAFILNTAAYTAEIIRGSIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+G++EAA A G++  +A R ++LP A+R  +P  +++ + ++  S++A  V   DL 
Sbjct: 116 SMPQGEIEAAKAYGMSPFQAFRRIILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                + ++     E  L     Y+ L+  I     +L A+
Sbjct: 176 GAARIVNSRYYAPFESFLFAGLCYMVLTFAIIWVFKKLEAR 216


>gi|298717477|ref|YP_003730119.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361666|gb|ADI78447.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 230

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 231 GLPTLVLIALKY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           G+P +V+I L Y      LHF   ++G + N    +   P ++ + +ALS   AAF AE+
Sbjct: 63  GVPMVVVIFLAYYGLPPALHFVATLIGVEVN----AHSLPNWVIIIVALSACVAAFQAEV 118

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            +  L +   GQ +AA++LG +  +  R V+ PQ + + IP L + ++ ++K  SLA A+
Sbjct: 119 WKGALNSFDSGQSDAALSLGYSGGQLFRRVMFPQIIVAAIPDLANAFMVIMKALSLAFAI 178

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              D+ +            +E  LI +  Y+ ++ ++    +R+ A + ++
Sbjct: 179 EVVDIFAQAQLTAALNFYYLEAFLIAVVFYMVIAYVVTKIADRIEAALRVR 229


>gi|288905437|ref|YP_003430659.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|288732163|emb|CBI13728.1| putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
          Length = 231

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A + ++VR  L ++P+ Q E+ +ALGLT  +    V++PQ +R ++P   + 
Sbjct: 103 IVFSMWGIAEMGDLVRGALTSLPKHQFESGLALGLTKTQLFIYVIIPQILRRLLPQAVNL 162

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
              ++K +SL V +G  ++V VG  II      +    IW++
Sbjct: 163 MTRMIKTTSLIVLIGVVEVVKVGQQIIEANRLTVPSAAIWIY 204


>gi|188533324|ref|YP_001907121.1| Histidine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028366|emb|CAO96227.1| Histidine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 228

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFI 281
           T LI G+P LVL+ L +   Q+  ++      +F+G +    + M +  I L     A+ 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNQVT----DFLGFAQFDIDPMVAGIITLGFIYGAYF 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   ++VP+GQ+EAA A G TH +  R +L P  MR  +P + + +  +LK ++L 
Sbjct: 109 TETFRGAWMSVPKGQVEAATAFGFTHSQTFRRILFPAMMRFALPGIGNNWQVILKATALV 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
             +G  D+V         T Q     ++   IYL
Sbjct: 169 SLLGLEDVVKATQLAGKSTWQPFWFAIVAGIIYL 202


>gi|167855354|ref|ZP_02478121.1| arginine ABC transporter, permease [Haemophilus parasuis 29755]
 gi|167853502|gb|EDS24749.1| arginine ABC transporter, permease [Haemophilus parasuis 29755]
          Length = 223

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 6/171 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVR 286
           L+ GLP ++++ L Y   F  P +     I G  V    F    +ALS   A++ ++ +R
Sbjct: 55  LLRGLPEILVVFLIY---FGAPEV--LEMITGEYVELGAFGCGVVALSIIFASYASQSLR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G 
Sbjct: 110 GAIQAIPLGQWESGAALGLSRGYTFVNIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGV 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++     I   T Q          IYL ++++  + + +L  +    E+
Sbjct: 170 HDIMRQTELINTSTHQPFTWYGTAALIYLGVTLVSQVIIRKLELRFTRFER 220


>gi|51473329|ref|YP_067086.1| glutamine transport system permease protein GlnP [Rickettsia typhi
           str. Wilmington]
 gi|81692320|sp|Q68XN8|GLNP_RICTY RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|51459641|gb|AAU03604.1| glutamine transport system permease protein GlnP [Rickettsia typhi
           str. Wilmington]
          Length = 218

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 68/120 (56%), Gaps = 10/120 (8%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV +++   ++F  P +    F         FM+  I+ +  + A+++E++R+G+ 
Sbjct: 64  GTPLLVQLSI---IYFAAPYIISIKF-------SVFMAGVISFALNSGAYVSEVIRAGIN 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            + +GQ EAA AL +      + ++LPQA+ +I P L ++ +NL+K S++   +G  DL+
Sbjct: 114 TIDKGQFEAAEALAIPKFLIMKDIILPQAINNIFPSLVNELINLIKESAIISMLGEMDLM 173


>gi|219666813|ref|YP_002457248.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Desulfitobacterium hafniense DCB-2]
 gi|219537073|gb|ACL18812.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Desulfitobacterium hafniense DCB-2]
          Length = 218

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 80/152 (52%), Gaps = 7/152 (4%)

Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
             P+L Q  FI       G ++SP    + + L  + + +++E+ RSG+ AVP+GQ EAA
Sbjct: 63  STPLLVQLYFIFYVLPQAGLSLSPLTAGI-MGLGIHYSTYLSEVYRSGIEAVPQGQWEAA 121

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            AL  +  +    +++PQA+  +IP + +  + + K + L  A+   +++     I + +
Sbjct: 122 KALNFSPWQVWSKIIIPQAVPPVIPVMGNYLITMFKETPLLSAITLVEILQTAKIIGSHS 181

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + +E   I  F++L LS   ++ + RL  ++
Sbjct: 182 FRYLEGFTIVGFLFLLLSYPCSVMIRRLEMRM 213


>gi|330446639|ref|ZP_08310291.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490830|dbj|GAA04788.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 246

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 84/160 (52%), Gaps = 22/160 (13%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPV--LGQF--NFIGGSTVSPEF 266
           +  +A+  LY  T +I G+P LVL+ L +   Q+  +  +  + ++  N+   S  S E+
Sbjct: 45  RWARAIATLY--TTVIRGIPDLVLMMLIFFGGQMLLNDSLYNINEWLNNYFTQSDPSHEW 102

Query: 267 MSL---YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            S    YI +S + A          A++AE  R  ++AV +G++EA  A G++   + R 
Sbjct: 103 TSYLPDYIEISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAGKAYGMSGFLSFRR 162

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +LLPQ +R  +P   + +L LLK ++L   +G  D+V  G
Sbjct: 163 ILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKG 202


>gi|261253294|ref|ZP_05945867.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           orientalis CIP 102891]
 gi|260936685|gb|EEX92674.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           orientalis CIP 102891]
          Length = 246

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV RG++EAA A G++   A R +LLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAIMAVDRGELEAAKAYGMSSFLAFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P   + +L LLK ++L   +G  D+V
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMV 199


>gi|317049496|ref|YP_004117144.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951113|gb|ADU70588.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 230

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 10/172 (5%)

Query: 231 GLPTLVLIALKY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           G+P +V+I L Y      LHF   + G + N    +   P ++ + +ALS   AAF AE+
Sbjct: 63  GVPMVVVIFLAYYGLPPALHFVATLFGIEVN----AHSLPNWVIIIVALSACVAAFQAEV 118

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            +  L +   GQ +AA +LG T+ +  R V+ PQ + + IP L + ++ ++K  SLA A+
Sbjct: 119 WKGALNSFDSGQSDAAQSLGYTNGQLFRRVMFPQIIVAAIPDLANAFMVIMKALSLAFAI 178

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D+ +            +E  LI +  Y+ ++ ++    + + AK+ L+ 
Sbjct: 179 EVVDIFAQAQLTAALNFYYLEAFLIAVVFYMVIAWLVTKIADIIEAKLRLRS 230


>gi|222082276|ref|YP_002541641.1| octopine ABC transporter [Agrobacterium radiobacter K84]
 gi|221726955|gb|ACM30044.1| octopine ABC transporter [Agrobacterium radiobacter K84]
          Length = 239

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 18/207 (8%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I +  + +GIV+  F +  ++    +T + +   Y  T ++ G+P L++I   Y L+F  
Sbjct: 31  IAISGYAIGIVIGGFGS-WAKVSGGRTTRIVADTY--TTVLRGIPDLLVI---YLLYFGG 84

Query: 249 P--------VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                    + G   F+G     P F++  +A+   + A   E+ R    AV RG++EAA
Sbjct: 85  SAAVTAMGRLFGAEGFVG----FPGFLAGSLAVGITSGAQQTEVFRGAFKAVHRGEIEAA 140

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IA G++     R ++ P  +R  +P L + +  +LK S+L    G A+L+         T
Sbjct: 141 IACGMSRWLRFRRIVAPLTLRHALPGLGNVWQVVLKESALVSITGVAELLRQAQVGAGST 200

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNR 387
           G   +  LI   +YL++S +  + M +
Sbjct: 201 GLPFDFYLIAGLLYLAISTVSGVLMRQ 227



 Score = 36.2 bits (82), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 31/67 (46%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +A A+L G   T  +A SG     +IG      ++S  +    +   Y  V R IP L
Sbjct: 15  DGWAKALLAGAWMTVLIAISGYAIGIVIGGFGSWAKVSGGRTTRIVADTYTTVLRGIPDL 74

Query: 143 VVIFFLY 149
           +VI+ LY
Sbjct: 75  LVIYLLY 81


>gi|170694567|ref|ZP_02885719.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140449|gb|EDT08625.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 229

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI  +P LVL+ L  Y +        D   + QF+      + P F++  + L     
Sbjct: 54  TTLIRSVPDLVLMLLLFYSIQIAVNNLTDALDVAQFD------IDP-FVAGVLTLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K +
Sbjct: 107 AYFTETFRGAFLAVPRGQLEAGSAYGMSGVRVFARILFPQMMRFALPGIGNNWQVLVKAT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +G AD+V         T      ILI   IYL+L+
Sbjct: 167 ALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLALT 206


>gi|118468211|ref|YP_889612.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Mycobacterium smegmatis str. MC2 155]
 gi|118169498|gb|ABK70394.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mycobacterium smegmatis str. MC2 155]
          Length = 232

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 46/72 (63%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+VR  + +VP  Q EA +ALGL   +  R V+LPQA+  ++PP  + ++ +LK+
Sbjct: 97  GAYGAEVVRGAIASVPSTQWEATVALGLGRFRRMRRVILPQALPEMVPPFGNLWIQILKS 156

Query: 338 SSLAVAVGFADL 349
           SSL   +G  +L
Sbjct: 157 SSLLYLIGITEL 168


>gi|87122517|ref|ZP_01078396.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Marinomonas sp. MED121]
 gi|86162159|gb|EAQ63445.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Marinomonas sp. MED121]
          Length = 229

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 3/157 (1%)

Query: 226 TFLIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           T +I G+P L+ + + Y         V G F +     + P F +   AL     A+  E
Sbjct: 55  TTIIRGIPELLTVLIIYFGATTVLMAVAGLFGYEDYIEIGP-FAAGVTALGLTFGAYATE 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R  L ++P+GQ EAA+ALG+   +    ++LPQ  R  +P L + +L LLK+++L   
Sbjct: 114 VFRGALQSIPKGQNEAAVALGMGRVRTFYRIILPQVWRMALPGLGNLFLVLLKDTALVSV 173

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           VG  D++      ++ T +          +YL L+I+
Sbjct: 174 VGLDDIMRKANIAVSSTKEPFLFYSAAAVLYLGLTII 210


>gi|289674516|ref|ZP_06495406.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
 gi|302186817|ref|ZP_07263490.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|330900039|gb|EGH31458.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330938795|gb|EGH42320.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 221

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 84/154 (54%), Gaps = 5/154 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P   + A+  +L  + P L Q  F F G  ++     E+ +  +A+     A+  EIVR+
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQ+EA+ AL ++  +A R V+L  A+  + P L+SQ + ++  SS+   +   
Sbjct: 112 GIQAIPKGQLEASAALAMSRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 172 ELSFYANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|253689164|ref|YP_003018354.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755742|gb|ACT13818.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 238

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA  V   D++ +   I   T Q      I   IYL++S ++I LF
Sbjct: 167 VILMLHSTALAFTVTVPDILKIARDINAATYQPFYAFGIAAVIYLAISFVLIGLF 221


>gi|239834737|ref|ZP_04683065.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822800|gb|EEQ94369.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 237

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 27/150 (18%)

Query: 205 TRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           TR++R    F  + G+  P L +  F+ FGLP                         G T
Sbjct: 65  TRMARIVSLFLVEIGRGAPALVLLQFMYFGLPAT-----------------------GLT 101

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++  F +  IAL+  T A+ +EI+R+ L ++  GQ EAA ALG +     R VLLPQA+R
Sbjct: 102 LT-SFAAAVIALAWNTGAYTSEIIRASLQSIHHGQREAAEALGFSVLDELRFVLLPQALR 160

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
             +P L    + + + +SL   +   +LVS
Sbjct: 161 VALPALLGFAILIFQGTSLCFTIALPELVS 190


>gi|259907902|ref|YP_002648258.1| Histidine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224963524|emb|CAX55014.1| Histidine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283477779|emb|CAY73695.1| Histidine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 228

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 15/189 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TFLIFGLPTLVLIALK-YQLHF 246
           VF+ +LG++ +    RLS           PL  IS   T LI G+P LVL+ L  Y L  
Sbjct: 25  VFAVILGLIGA--GARLSNR--------RPLAVISEVYTTLIRGVPDLVLMLLIFYGLQI 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +  F       + P    + I L     A+  E  R   +AVP+GQ+EAA A G T
Sbjct: 75  ALNQVTDFFGFAQFDIDPMVAGI-ITLGFIYGAYFTETFRGAWMAVPKGQVEAATAFGFT 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q    
Sbjct: 134 RSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPFWF 193

Query: 367 ILIWMFIYL 375
            ++   IYL
Sbjct: 194 AIVAGIIYL 202



 Score = 36.2 bits (82), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            Y+  I  G + T  LA S ++ A I+G L+GAG RLS  + +A I  VY  + R +P L
Sbjct: 4   GYSEVIFKGALVTLELALSSVVFAVILG-LIGAGARLSNRRPLAVISEVYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|86147678|ref|ZP_01065986.1| arginine ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85834459|gb|EAQ52609.1| arginine ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 222

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 13/166 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEIV 285
           G P LV I L Y      P  GQF++I  S +      P F ++ +AL+  TAA+   + 
Sbjct: 58  GTPLLVQIFLVYY----GP--GQFDWIRESFLWTWLSQPWFCAM-LALALNTAAYSTLLF 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R    A+P GQ EA  ALG+  + AT  VLLP A+R  +P  +++ + + K +SLA  + 
Sbjct: 111 RGAFNAIPAGQWEACRALGM-DKIATLKVLLPYALRRAVPAYSNEVILVFKGTSLASTIT 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 170 IMDLMGYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKK 215


>gi|325970768|ref|YP_004246959.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta sp. Buddy]
 gi|324026006|gb|ADY12765.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 211

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 48/76 (63%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ ++P GQ EA++ LG +       V+ PQ ++ IIP + ++ + L+K+
Sbjct: 94  AAYFAEIYRGGIQSIPIGQYEASLVLGFSKTHTFTHVVAPQVVKRIIPAMGNEVITLVKD 153

Query: 338 SSLAVAVGFADLVSVG 353
           ++LA  +G A+L  V 
Sbjct: 154 TALAQTIGVAELFRVA 169


>gi|306831518|ref|ZP_07464676.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304426303|gb|EFM29417.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 225

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A + ++VR  L ++P+ Q E+ +ALGLT  +    V++PQ +R ++P   + 
Sbjct: 97  IVFSMWGIAEMGDLVRGALTSLPKHQFESGLALGLTKTQLFIYVIIPQILRRLLPQAVNL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
              ++K +SL V +G  ++V VG  II      +    IW++
Sbjct: 157 MTRMIKTTSLIVLIGVVEVVKVGQQIIEANRLTVPSAAIWIY 198


>gi|210611519|ref|ZP_03288939.1| hypothetical protein CLONEX_01129 [Clostridium nexile DSM 1787]
 gi|319936516|ref|ZP_08010931.1| polar amino acid ABC transporter [Coprobacillus sp. 29_1]
 gi|210151966|gb|EEA82973.1| hypothetical protein CLONEX_01129 [Clostridium nexile DSM 1787]
 gi|319808408|gb|EFW04963.1| polar amino acid ABC transporter [Coprobacillus sp. 29_1]
          Length = 219

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 24/173 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L                       G ++  EF  +         A
Sbjct: 64  PLLVQLFFLYFGLPKL-----------------------GISIGAEFCGVLGLAL-LGGA 99

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE  RSGL +V + QME+A++LG++ ++A R ++LPQA+   +P   +  + LLK +S
Sbjct: 100 YMAEAFRSGLESVEQIQMESALSLGMSRQQAVRHIILPQAISISVPAFVANIIFLLKETS 159

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  A+   DL+     +I    +  E +++ +  YL + + ++L  + +  K+
Sbjct: 160 VFSAISLMDLMFTAKDLIGLYYKTTECLVLLVIFYLIILLPVSLIGSIVERKV 212


>gi|49081960|gb|AAT50380.1| PA5154 [synthetic construct]
          Length = 232

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F KP L    F  G+          +AL     A+  E+ R  L+++PRG  EA  ALGL
Sbjct: 86  FGKPDLALSPFAAGT----------LALGLCFGAYATEVFRGALLSIPRGHREAGQALGL 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    ++LPQ  R  +P L + YL LLK+++L   +   +++       N T +   
Sbjct: 136 SPGRIFWRIVLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFT 195

Query: 366 IILIWMFIYLSLS--IMIAL-FMNR 387
             +    IYLSL+  IM+AL F+ R
Sbjct: 196 FYMTAAAIYLSLTVVIMVALHFLER 220


>gi|330897282|gb|EGH28701.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330939545|gb|EGH42868.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330981783|gb|EGH79886.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 229

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +    D      P+LG  ++I    + P  M+    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LMAGICTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG
Sbjct: 114 RGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|23465687|ref|NP_696290.1| amino acid ABC transporter permease [Bifidobacterium longum
           NCC2705]
 gi|23326365|gb|AAN24926.1| probable permease protein for ABC transporter system for
           amino-acids [Bifidobacterium longum NCC2705]
          Length = 320

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 9/130 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I T ++ G+P +V++   Y + F  P LG F  I  S +        IA+    +A+
Sbjct: 149 LALIYTTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVLG------TIAVVMGYSAY 199

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++ K+  L
Sbjct: 200 VSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGL 259

Query: 341 AVAVGFADLV 350
              +G  D V
Sbjct: 260 ISVLGAVDAV 269


>gi|186476549|ref|YP_001858019.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193008|gb|ACC70973.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 229

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHF----- 246
           S VLG+V +     L+R       +AL   Y  T LI  +P LVL+ L  Y +       
Sbjct: 28  SVVLGLVGAAAKLSLNRPL-----RALATGY--TTLIRSVPDLVLMLLLFYSIQIAVNNL 80

Query: 247 -DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D   L QF+      + P F++  + L     A+  E  R   +AVPRGQ+EA  A G+
Sbjct: 81  TDALDLPQFD------IDP-FIAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGM 133

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         T     
Sbjct: 134 SGARVFARILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 193

Query: 366 IILIWMFIYLSLS 378
            IL+   IYL+++
Sbjct: 194 FILVAALIYLAIT 206


>gi|189439739|ref|YP_001954820.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|239622295|ref|ZP_04665326.1| polar amino acid ABC transporter [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312133132|ref|YP_004000471.1| hism5 [Bifidobacterium longum subsp. longum BBMN68]
 gi|322688698|ref|YP_004208432.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322690684|ref|YP_004220254.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|189428174|gb|ACD98322.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|239514292|gb|EEQ54159.1| polar amino acid ABC transporter [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|311774131|gb|ADQ03619.1| HisM5 [Bifidobacterium longum subsp. longum BBMN68]
 gi|320455540|dbj|BAJ66162.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|320460034|dbj|BAJ70654.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 311

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 9/130 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I T ++ G+P +V++   Y + F  P LG F  I  S +        IA+    +A+
Sbjct: 140 LALIYTTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVLG------TIAVVMGYSAY 190

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++ K+  L
Sbjct: 191 VSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISMQKDVGL 250

Query: 341 AVAVGFADLV 350
              +G  D V
Sbjct: 251 ISVLGAVDAV 260


>gi|116628271|ref|YP_820890.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101548|gb|ABJ66694.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 226

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 36/208 (17%)

Query: 193 SFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           SF+LG+V+S+         ++LS  + E + +  PLL    FL FGLP + L+     L 
Sbjct: 31  SFLLGLVVSVIRHYRVPILSQLSTAYIELS-RNTPLLIQLFFLYFGLPRIGLV-----LS 84

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            +   +    F+GGS                   ++AE  RSGL AV + Q E  +++GL
Sbjct: 85  SETCAVVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEVGLSIGL 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQ 362
           T  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   ++    +T  
Sbjct: 126 TPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLMGLYYETDV 185

Query: 363 AIEIILI-WMFIYLSLSIMIALFMNRLN 389
           A+ ++++ ++ + L +S++ +    RL 
Sbjct: 186 ALGMLVVAYLLMLLPISLVFSWIERRLR 213


>gi|116670306|ref|YP_831239.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116610415|gb|ABK03139.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Arthrobacter sp. FB24]
          Length = 218

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 71/119 (59%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A++AE+ RSG+  VP GQ EAA AL L   +    ++LPQA+R+++P L +  + + K+
Sbjct: 100 SAYMAEVYRSGIQGVPTGQWEAATALSLPGSRTWGRIILPQAIRTVVPMLGNYLIQMFKD 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           S++  A+   +L++    I + + + +E + +   ++L++S   +  +NRL  + A + 
Sbjct: 160 SAVLSAITVVELMATAQAIGSSSFRYLEPLTLAALLFLAVSYPASRLVNRLERRYAPQH 218


>gi|170746805|ref|YP_001753065.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170653327|gb|ACB22382.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 217

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 11/130 (8%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P +V +   + ++F  P  G    +  + V    + L IA S Y A    E  R+G+ 
Sbjct: 64  GIPIIVQL---FYIYFVMPDFG----LSLTAVQAAIIGLGIAYSAYQA----ENFRAGIE 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV RGQ+EAA+++G+      R V+LPQA+R  +PP  +  + +LK+SS A  +  A+L 
Sbjct: 113 AVDRGQVEAALSIGMGWGMTMRRVILPQAIRIALPPYGNIMIMMLKDSSQASTITVAELA 172

Query: 351 SVGGTIINQT 360
             G  I + T
Sbjct: 173 LQGKLIASST 182


>gi|167567704|ref|ZP_02360620.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia oklahomensis EO147]
          Length = 489

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 79/138 (57%), Gaps = 6/138 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH-RKATRLVLLPQAM 320
           +SP F +  + L+   AAF AE +R G+++V  GQ+EAA ALGL   R+ATR+V LPQAM
Sbjct: 181 ISP-FCAAVLGLTLNHAAFAAEGIRGGILSVDPGQLEAAAALGLPRARQATRIV-LPQAM 238

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSL 377
           R+ +P   +  ++L K +S+   +   +L      I  +  + I +++   +W  I L++
Sbjct: 239 RAFLPVAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 298

Query: 378 SIMIALFMNRLNAKIALK 395
             ++   + R  A+ A++
Sbjct: 299 LSIVQAQVERRYARGAVR 316


>gi|313896702|ref|ZP_07830250.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312974619|gb|EFR40086.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 235

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 1/124 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             V P + +++I  +  + A + E  RS L+A+P+GQ+EA +A GL+       V+LPQA
Sbjct: 97  DAVDPFWYAVFI-FTINSIALLTEAFRSALLAIPKGQLEAGLASGLSAPATYLHVILPQA 155

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +   +P + +  +NL+K +SLA  +   D+++VG    +     IE  L    +YL L  
Sbjct: 156 LVVALPSICNITVNLIKGTSLAFLMTVKDIMAVGKIAASYGYNYIESYLDVFVVYLVLCT 215

Query: 380 MIAL 383
           ++ L
Sbjct: 216 IVQL 219


>gi|237745208|ref|ZP_04575689.1| amino acid permease [Fusobacterium sp. 7_1]
 gi|256026689|ref|ZP_05440523.1| amino acid permease protein SP0710 [Fusobacterium sp. D11]
 gi|289764684|ref|ZP_06524062.1| amino acid permease [Fusobacterium sp. D11]
 gi|229432437|gb|EEO42649.1| amino acid permease [Fusobacterium sp. 7_1]
 gi|289716239|gb|EFD80251.1| amino acid permease [Fusobacterium sp. D11]
          Length = 226

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 17/168 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS + GI+  LF             K +  +Y+    I  +P LVL+ + Y        
Sbjct: 34  IFSIIFGILFGLFM-----EIKNPITKIISQIYLQVIRI--MPPLVLLFITY-------- 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G    I G  +S E  S  I  + +  A + ++VR  + ++P+ Q+E+A+AL L  ++ 
Sbjct: 79  FG-VTRIYGVHISAE-TSAIIVFTIWGTAEMGDLVRGSIESIPKSQIESAMALALDKKQI 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              V++PQ +R +IP   +    ++K +SL V +G  +++ VG  II+
Sbjct: 137 YLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQIID 184


>gi|148976102|ref|ZP_01812845.1| arginine transporter permease subunit ArtM [Vibrionales bacterium
           SWAT-3]
 gi|145964497|gb|EDK29751.1| arginine transporter permease subunit ArtM [Vibrionales bacterium
           SWAT-3]
          Length = 222

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF++I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDWIRESFMWTWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            + R    A+P GQ EA  ALG+  + AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 LLFRGAFNAIPAGQWEACRALGM-DKIATLKVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINGQTYDTLTVFGIAGAFYLAVNGILTLIFRQVEKK 215


>gi|325063356|gb|ADY67046.1| amino acid ABC transporter, permease protein [Agrobacterium sp.
           H13-3]
          Length = 216

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 51/90 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y A   AEI R+G  AVPRG++EAA  LG+T       + +PQA+   +P    Q
Sbjct: 90  VGLGLYGAGPFAEIFRAGFNAVPRGEIEAAGMLGITSGDTFLHIQMPQALALTLPASVGQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +NL+K S++   +  ++L  V GTI + T
Sbjct: 150 AINLVKESAVLSVITLSELTKVAGTISSIT 179


>gi|262404203|ref|ZP_06080758.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
 gi|262349235|gb|EEY98373.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
          Length = 225

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 11/207 (5%)

Query: 177 SFPTL--TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           SFP     + T   +  FS V+G++ ++    ++R   +K        YI  + + G P 
Sbjct: 9   SFPVYLGGLWTTVWLVSFSLVVGLLWAI-PMAIARSSKQKWLSFPAWGYI--YFLRGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV      QL+     + QF  + G+     +    +A    T+A+ AEI+R  +  +P+
Sbjct: 66  LV------QLYLIYYGMDQFFPVKGTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPK 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G++EAA A G+   +  + ++LP A+R  +P  +++ + +L  S++A  V   DL     
Sbjct: 120 GEVEAAKAYGMGRWQTYQRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAAR 179

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMI 381
            + ++     E  L     Y+SL+ +I
Sbjct: 180 LVNSRYYAPFEAFLTAGLFYMSLTFII 206


>gi|213026850|ref|ZP_03341297.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 152

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 42/57 (73%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R
Sbjct: 96  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFR 152



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWF 75

Query: 149 Y-------KSVLSVLPIPD---HSIVLPFGMF 170
           Y       ++VL + P  D    S ++ F MF
Sbjct: 76  YLIVPGFLQNVLGLSPKTDIRLISAMVAFSMF 107


>gi|308183090|ref|YP_003927217.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           PeCan4]
 gi|308065275|gb|ADO07167.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           PeCan4]
          Length = 240

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++F   +     +HF  KT       Y+S  LI G P LV I + +   +
Sbjct: 47  IISFILGLFIAVFVALIKIAPPKHFIHKTLLVGVNFYVS--LIRGTPLLVQIVVVF---Y 101

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 102 GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 154 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 213

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 214 YLEAALIYWLFCLVLEVIQKRVE 236


>gi|254502244|ref|ZP_05114395.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222438315|gb|EEE44994.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 220

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 67/128 (52%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  + L+ Y A+ +A + R G+ AV +    AA +LG+++ +  R V+ P   R++ P
Sbjct: 92  FGSGVVVLTLYAASLVANVARGGIEAVGKPMRRAARSLGMSYWQDMRHVVFPIGGRAVFP 151

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 L ++K+S+L   +G+ +LV     +I +T +   I+ I    Y +LS  I+ + 
Sbjct: 152 SWVGVALGVMKDSALVSVLGYVELVKASQILITRTQEPFLILAIAGAFYFALSYPISRYA 211

Query: 386 NRLNAKIA 393
            +L  + A
Sbjct: 212 AQLEKRWA 219


>gi|302545138|ref|ZP_07297480.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462756|gb|EFL25849.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           himastatinicus ATCC 53653]
          Length = 247

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+     A+ +EIVR  + +V   Q EAAIAL  T  +  R V+LPQA+  +IPP  + 
Sbjct: 89  LAIGLNYGAYGSEIVRGAIASVAPAQGEAAIALSFTPAQRMRRVILPQAIPEMIPPFNNL 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +LK ++L  AV  AD+          TG++ +I  I + +Y  L+ ++   M  L  
Sbjct: 149 LIEILKATALVSAVNVADITFAAQLSRLATGESAQIYSIILVLYFVLAFILTRLMRLLER 208

Query: 391 K 391
           +
Sbjct: 209 R 209


>gi|218709551|ref|YP_002417172.1| arginine transporter permease subunit ArtM [Vibrio splendidus
           LGP32]
 gi|218322570|emb|CAV18729.1| ABC transporter: transmembrane protein; Arginine uptake [Vibrio
           splendidus LGP32]
          Length = 222

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF++I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDWIRESFLWTWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            + R    A+P GQ EA  ALG+  + AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 LLFRGAFNAIPAGQWEACRALGM-DKIATLKVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKK 215


>gi|254226032|ref|ZP_04919631.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125621415|gb|EAZ49750.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
          Length = 260

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R  IP   + +L LLK 
Sbjct: 141 GAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKT 200

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++L   +G  D+V +       T             Y++++I+   F +     + L E+
Sbjct: 201 TALVSIIGLEDMVRISSLAAGSTKMPFT-------FYMAVAIIFLFFTSVSTGLLKLLER 253

Query: 398 K 398
           K
Sbjct: 254 K 254


>gi|296159437|ref|ZP_06842262.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295890421|gb|EFG70214.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 229

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI  +P LVL+ L  Y +        D   L QF+      + P F++  + L     
Sbjct: 54  TTLIRSVPDLVLMLLLFYSIQIAVNDLTDALNLPQFD------IDP-FVAGVLTLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K +
Sbjct: 107 AYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIGNNWQVLVKAT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +G AD+V         T      ILI   IYL+++
Sbjct: 167 ALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLAIT 206


>gi|262044439|ref|ZP_06017500.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259038219|gb|EEW39429.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 221

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 61/109 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+     A+  EIVR+G+   P+GQ EA   LGL+  +    V+LP A++ I P L SQ
Sbjct: 95  LAMMVNLGAYSTEIVRAGIQVTPKGQWEAGRVLGLSRTQTFVRVVLPPALQRIYPALVSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            + ++  SS+   V + +L      I ++T  + E+ L+   IYL+LSI
Sbjct: 155 CIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTGIYLALSI 203


>gi|207092331|ref|ZP_03240118.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 240

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++F   +     +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 47  IISFILGLFIAVFVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 101

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 102 GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 154 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEIFRIAQQKANASYDFLPI 213

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 214 YLEAALIYWLFCLVLEVIQKRVE 236


>gi|116691157|ref|YP_836780.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|116649246|gb|ABK09887.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 226

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 14/149 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G++L+ F   L+R F  +  +A+   YI  +L  G P LV +   + + +  P +G
Sbjct: 30  SFAIGLLLA-FGAALTRLFGPRWAQAVVRFYI--WLFRGSPLLVQL---FVIFYGLPNVG 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T  +A R
Sbjct: 84  --------IVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALR 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
             +LPQA R  +  L++ +++L+K++SLA
Sbjct: 136 RAILPQAARVALSALSNSFISLVKDTSLA 164


>gi|260555375|ref|ZP_05827596.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Acinetobacter baumannii ATCC 19606]
 gi|260411917|gb|EEX05214.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Acinetobacter baumannii ATCC 19606]
          Length = 219

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 30/202 (14%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 34  VGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFTCG 89

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 90  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLQPTQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E + +
Sbjct: 130 IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 189

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
            +  YL + + +++  + L  K
Sbjct: 190 LIMAYLIILLPVSILTSYLEHK 211


>gi|300717677|ref|YP_003742480.1| lysine/arginine/ornithine ABC transporter, permease protein
           [Erwinia billingiae Eb661]
 gi|299063513|emb|CAX60633.1| lysine/arginine/ornithine ABC transporter, permease protein
           [Erwinia billingiae Eb661]
          Length = 228

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 14/183 (7%)

Query: 214 KTGKALPLLYIS-TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            + +AL L++   T LI G+P LVL+      L+  L+     LG   F     + P   
Sbjct: 40  SSNRALRLIFEGYTTLIRGVPDLVLMLLIFYGLQIALNQLTDALGVDQF----DIDPMVA 95

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            + I L     A+  E  R   +AVPRGQ+EAA A G T  +  R +L P  MR  +P +
Sbjct: 96  GI-ITLGFIYGAYFTETFRGAYMAVPRGQIEAATAFGFTSSQTFRRILFPGMMRYALPGI 154

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALF 384
            + +  +LK ++L   +G  D+V         T Q     ++   IYL   +LS  + L+
Sbjct: 155 GNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPFYFAVVAGVIYLVFTTLSNGVLLW 214

Query: 385 MNR 387
           + R
Sbjct: 215 LER 217


>gi|239814893|ref|YP_002943803.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239801470|gb|ACS18537.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 273

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 58/106 (54%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ + + L+   +A +AEI R  + ++P  Q EAA +L     +  RL++LPQ +R +
Sbjct: 139 PDWIKVVLGLALPASANVAEIFRGAIQSIPSAQWEAAQSLAFRRSEIFRLIVLPQCLRRM 198

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +PP  + Y ++  +++LA  VG  D+V       N   +    IL+
Sbjct: 199 LPPWMNLYASITMSTALASLVGVHDVVDTAQIASNTVARTDFTILV 244



 Score = 37.7 bits (86), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 13/96 (13%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++  A+L G +    ++   M   T+ G LVGA  LS  +++    R YV+VFRN P LV
Sbjct: 57  TWLPALLRGLLANIEISVLAMALGTLAGLLVGAVSLSPLRVLRVAARWYVQVFRNAPVLV 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           +++F              + V PF + L +    FP
Sbjct: 117 LVYFT-------------TYVFPFELHLVSWTFPFP 139


>gi|261820775|ref|YP_003258881.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261604788|gb|ACX87274.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 238

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T+A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALALNTSAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA  V   D++ +   I   T Q      I   IYL++S ++I LF
Sbjct: 167 VILMLHSTALAFTVTVPDILKIARDINAATYQPFYAFGIAAVIYLAISFVLIGLF 221


>gi|327393251|dbj|BAK10673.1| octopine transport system permease protein OccQ [Pantoea ananatis
           AJ13355]
          Length = 239

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 14/195 (7%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVL----GQFNFIG 258
           A +LS H      + L  L     +IF G+P L++I   Y  +F    L    GQ     
Sbjct: 43  AAKLSSH------RPLRWLGEGYSVIFRGIPELLVI---YLFYFGGSGLITQIGQIFGAQ 93

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   +P F+   +A+   + ++ AE+ R+  +A+ RG++EAA+A G++  +  + +LLPQ
Sbjct: 94  GFIEAPPFLIGALAIGLISGSYQAEVYRAARLALSRGEVEAAVATGMSRWRIRQRILLPQ 153

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             R  +P L++ +   LK+S+L    G  +L+         T       LI    YL L+
Sbjct: 154 VARYALPGLSNVWQMSLKDSALVSVTGIVELMRASQVAAGSTRDYFTFYLIGGGCYLLLT 213

Query: 379 IMIALFMNRLNAKIA 393
           ++      R+ A++ 
Sbjct: 214 VLSNRAFLRVEARLG 228



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 27/43 (62%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             ++G+ + A +LS+++ + W+   Y  +FR IP L+VI+  Y
Sbjct: 34  GAVVGSGIAAAKLSSHRPLRWLGEGYSVIFRGIPELLVIYLFY 76


>gi|222109052|ref|YP_002551318.1| nopaline ABC transporter [Agrobacterium radiobacter K84]
 gi|221727974|gb|ACM31024.1| nopaline ABC transporter [Agrobacterium radiobacter K84]
          Length = 236

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 19/195 (9%)

Query: 193 SFVLGIVL-SLFAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           S++ GI+  S+FA  +LSR +  +      L  + T ++ G+P L++I L +   F    
Sbjct: 31  SYLFGIIFGSIFAAAKLSRFWSLRL-----LGDVYTTVVRGVPELLIIFLVF---FGGGT 82

Query: 251 L------GQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      G F + G   + P+ F+   + +S    A+  E++R+ ++AVP GQ+EAA ++
Sbjct: 83  LLRTIANGLFGYEG--YIEPQIFVIGVLCISVSAGAYATEVIRAAVLAVPPGQIEAAKSI 140

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      R VL+PQA R  +P L + +   LK++SL   VG  +++         T Q 
Sbjct: 141 GMGPWLRLRRVLIPQAARFALPGLGNVWQFTLKDTSLISVVGLVEIMRTAAMGAGSTKQP 200

Query: 364 IEIILIWMFIYLSLS 378
               +    I+L LS
Sbjct: 201 FTFYITAFVIFLVLS 215


>gi|146309285|ref|YP_001189750.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145577486|gb|ABP87018.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 231

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 68/126 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P
Sbjct: 96  FAAGTIALGLCFGAYATEVFRGAILAIPKGHREAGMALGMSKGRILWKLILPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  + +     ++  FIYL L+I+  + +
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFYMVAAFIYLGLTILAMIGL 215

Query: 386 NRLNAK 391
           + L  +
Sbjct: 216 HFLEKR 221


>gi|116617273|ref|YP_817644.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096120|gb|ABJ61271.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 226

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 71/125 (56%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S + AA +++IVR  + ++ + Q E A ++GLT  +  R VL+PQ++ +I+P   + 
Sbjct: 97  LVFSLWFAAELSDIVRGAIQSISKSQRENAYSIGLTTLQTYRYVLIPQSVPNILPAFINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-ILIWMFI---YLSLSIMIALFMN 386
              ++K +S+ + +   D+++VG  II    Q   + +LI+ FI   Y  ++ +++ F  
Sbjct: 157 SSRIIKTTSILLLISVTDVITVGQQIIEANAQDTAVPLLIYGFIALLYFLINYLLSHFSR 216

Query: 387 RLNAK 391
           RL  K
Sbjct: 217 RLERK 221


>gi|171741233|ref|ZP_02917040.1| hypothetical protein BIFDEN_00307 [Bifidobacterium dentium ATCC
           27678]
 gi|283455404|ref|YP_003359968.1| putative Glutamate transport ATP-binding protein gluA
           [Bifidobacterium dentium Bd1]
 gi|306823530|ref|ZP_07456905.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Bifidobacterium dentium ATCC 27679]
 gi|309802946|ref|ZP_07697047.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171276847|gb|EDT44508.1| hypothetical protein BIFDEN_00307 [Bifidobacterium dentium ATCC
           27678]
 gi|283102038|gb|ADB09144.1| Putative Glutamate transport ATP-binding protein gluA
           [Bifidobacterium dentium Bd1]
 gi|304553237|gb|EFM41149.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Bifidobacterium dentium ATCC 27679]
 gi|308220413|gb|EFO76724.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 292

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 11/134 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + L  LY  T ++ G+P +V++   Y + F  P LG F  I      P  +     +  Y
Sbjct: 119 RVLAALY--TTIMRGVPMIVVL---YLIGFGIPGLGIFGRI-----DPSLLGTIAVVMGY 168

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +A ++AE++R+G   V   Q  +A +LGLT  + TR++++PQA+R + P L + ++++ K
Sbjct: 169 SA-YVAEVLRAGFNDVHPSQRASARSLGLTAGQTTRMIVIPQALRKVAPALMNDFISMQK 227

Query: 337 NSSLAVAVGFADLV 350
           +  L   +G  D V
Sbjct: 228 DVGLISVLGAVDAV 241


>gi|329911825|ref|ZP_08275609.1| ABC-type amino acid transport system, permease component
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545793|gb|EGF30920.1| ABC-type amino acid transport system, permease component
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 219

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 13/177 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+S  LI G P LV + L Y   +  P +G    I  S VS   +    ALS    AF+
Sbjct: 56  VYVS--LIRGTPLLVQVFLIY---YGLPSIG----IEFSPVSAGIL----ALSLNAGAFL 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  +  V  GQ  A+ +LGLT  +  R V+ PQA+R  +P + +  ++L+K++SL 
Sbjct: 103 SESLRGAVQGVSAGQWSASYSLGLTWVQTLRFVVAPQALRIAVPSMGNTLISLIKDTSLV 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L+     +I  T + + + +    +Y  LS++  +   RL  ++    ++
Sbjct: 163 SVITVTELMLATKEVIATTFRPLPLYVTAALLYWCLSMLFEVVQRRLEKRLQRAHQQ 219


>gi|315640022|ref|ZP_07895148.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484231|gb|EFU74701.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 213

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 70/115 (60%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ ++P+GQ EAA  L L   +  R +++PQ  +  +P + ++ +NL+K+
Sbjct: 96  AAYFAEIFRGGIQSIPQGQYEAAQVLRLNPIQTIRKIIIPQVTKITLPSVGNEVINLVKD 155

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SL   +G +D++ +G   + +    + ++ + + +YL+++ +  + + +L  ++
Sbjct: 156 TSLIYILGLSDVMRLGKIAMERDTTLVPLLGVAI-VYLAMTGICTVVLRQLENRL 209


>gi|270263424|ref|ZP_06191693.1| transporter [Serratia odorifera 4Rx13]
 gi|270042308|gb|EFA15403.1| transporter [Serratia odorifera 4Rx13]
          Length = 218

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL+  +    V++PQ
Sbjct: 80  GIDVSP-WAAAALALTLFTSAFLVDIWSGSIAALPKGQWEASRCLGLSFGQTLGRVIVPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AVRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKV 186


>gi|253581221|ref|ZP_04858478.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847498|gb|EES75471.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39BFAA]
          Length = 219

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 33/186 (17%)

Query: 193 SFVLGIVLSL---FATRLSRHFHE---KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + V+G+V S+   F   + R   E   +  +  PLL    FL FGLP + ++     L  
Sbjct: 31  AIVVGLVCSMIKYFRIPVLRQIVECYIELSRNTPLLIQLFFLYFGLPKIGIV-----LSS 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           ++  +    F+GGS                   ++AE  RSGL  VP  Q+E+A++LG++
Sbjct: 86  EQCAITGLTFLGGS-------------------YMAEAFRSGLDNVPPIQVESALSLGMS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQA 363
             +    ++LPQA+ + IP   +  + L+K +S+  AV  ADL+ V   +I    +T +A
Sbjct: 127 KSQVFTNIILPQAVSNSIPAFCANAIFLIKETSVFSAVALADLMFVTKDLIGIYYKTDEA 186

Query: 364 IEIILI 369
           + +++I
Sbjct: 187 LFMLVI 192


>gi|77456538|ref|YP_346043.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380541|gb|ABA72054.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 231

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 7/185 (3%)

Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVS-PEFMS 268
           KT    PL ++    + L+ G+P L+ + L Y    +    LG+F  +G   +    F +
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGVPELLWVLLIYFGTVNAMRALGEF--LGNPELELSAFAA 98

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    +++PQ  R  +P L 
Sbjct: 99  GVIALGLCFGAYATEVFRGAILAIPKGHREAGVALGLSKWRIFTKLIMPQMWRIALPGLG 158

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + ++ L+K+++L   +G  +++      +  + Q     ++   +YL L+++  + M+ L
Sbjct: 159 NLFMILMKDTALVSVIGLEEIMRHAQIGVTVSKQPFTFYMVAALMYLGLTVLAMIGMHLL 218

Query: 389 NAKIA 393
             + A
Sbjct: 219 EKRAA 223


>gi|307730184|ref|YP_003907408.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307584719|gb|ADN58117.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 229

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI  +P LVL+ L  Y +        D   L QF+      + P F++  + L     
Sbjct: 54  TTLIRSVPDLVLMLLLFYSIQIAVNNLTDALGLPQFD------IDP-FVAGVLTLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K +
Sbjct: 107 AYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFARILFPQMMRFALPGIGNNWQVLVKAT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +G AD+V         T      ILI   IYL+L+
Sbjct: 167 ALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLALT 206


>gi|241759156|ref|ZP_04757264.1| polar amino acid ABC transporter, inner membrane subunit [Neisseria
           flavescens SK114]
 gi|241320575|gb|EER56852.1| polar amino acid ABC transporter, inner membrane subunit [Neisseria
           flavescens SK114]
          Length = 222

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+ R+  R + LPQ++R  +P   + +  ++
Sbjct: 99  WGIAEMGDLVRGALESIEKHQVESGLALGLSRRQVFRYIELPQSVRRALPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|152970317|ref|YP_001335426.1| glutamine ABC transporter permease component [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206577693|ref|YP_002238436.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|238894801|ref|YP_002919535.1| glutamine ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288935410|ref|YP_003439469.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290509460|ref|ZP_06548831.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
 gi|330010550|ref|ZP_08306783.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955166|gb|ABR77196.1| glutamine ABC transporter permease component [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206566751|gb|ACI08527.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|238547117|dbj|BAH63468.1| glutamine ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288890119|gb|ADC58437.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289778854|gb|EFD86851.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
 gi|328534487|gb|EGF61075.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 221

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 61/109 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+     A+  EIVR+G+   P+GQ EA   LGL+  +    V+LP A++ I P L SQ
Sbjct: 95  LAMVVNLGAYSTEIVRAGIQVTPKGQWEAGRVLGLSRTQTFVRVVLPPALQRIYPALVSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            + ++  SS+   V + +L      I ++T  + E+ L+   IYL+LSI
Sbjct: 155 CIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTGIYLALSI 203


>gi|149909991|ref|ZP_01898640.1| arginine/ornithine transport protein AotM [Moritella sp. PE36]
 gi|149807005|gb|EDM66964.1| arginine/ornithine transport protein AotM [Moritella sp. PE36]
          Length = 236

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+  EI+R  L+   +G++EAA A G++  +  R ++LP A R  +P  +++ + +L 
Sbjct: 116 TAAYSTEIIRGSLLTTDKGEIEAAQAYGMSDFQVLRRIILPSAFRRALPAYSNEVIFMLH 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +S+A  V   D+   G  + ++     E  +    IYL L   I     RL  +
Sbjct: 176 ATSIASVVTLVDITGAGYNVYSRFYAPFEAFIFAGAIYLCLCFAIFAVFKRLEKR 230


>gi|147674527|ref|YP_001217396.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|146316410|gb|ABQ20949.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227013760|gb|ACP09970.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
          Length = 260

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R  IP   + +L LLK 
Sbjct: 141 GAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKT 200

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++L   +G  D+V +       T             Y++++I+   F +     + L E+
Sbjct: 201 TALVSIIGLEDMVRISSLAAGSTKMPFT-------FYMAVAIIFLFFTSVSTGLLKLLER 253

Query: 398 K 398
           K
Sbjct: 254 K 254


>gi|126641442|ref|YP_001084426.1| ABC-type amino acid transport system [Acinetobacter baumannii ATCC
           17978]
          Length = 198

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 31/200 (15%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 1   MGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFACG 56

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 57  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLKPTQ 96

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E + +
Sbjct: 97  IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 156

Query: 370 WMFIYLSLSIMIALFMNRLN 389
            +  YL + ++  ++ N+L+
Sbjct: 157 LIMAYL-IILLTRVYFNQLS 175


>gi|15641864|ref|NP_231496.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121587311|ref|ZP_01677083.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121727133|ref|ZP_01680307.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|153818859|ref|ZP_01971526.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153823972|ref|ZP_01976639.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|153825182|ref|ZP_01977849.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|153830541|ref|ZP_01983208.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|183179515|ref|ZP_02957726.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227081991|ref|YP_002810542.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229508041|ref|ZP_04397546.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae BX 330286]
 gi|229511720|ref|ZP_04401199.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae B33]
 gi|229515242|ref|ZP_04404702.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae TMA 21]
 gi|229518858|ref|ZP_04408301.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae RC9]
 gi|229520322|ref|ZP_04409748.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae TM 11079-80]
 gi|229529115|ref|ZP_04418505.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae 12129(1)]
 gi|229607588|ref|YP_002878236.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae MJ-1236]
 gi|254848948|ref|ZP_05238298.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|298498099|ref|ZP_07007906.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9656391|gb|AAF95010.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548471|gb|EAX58529.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121630511|gb|EAX62903.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|126510587|gb|EAZ73181.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126518509|gb|EAZ75732.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|148873971|gb|EDL72106.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|149741161|gb|EDM55212.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|183012926|gb|EDT88226.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227009879|gb|ACP06091.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229332889|gb|EEN98375.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae 12129(1)]
 gi|229342688|gb|EEO07680.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae TM 11079-80]
 gi|229343547|gb|EEO08522.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae RC9]
 gi|229347947|gb|EEO12906.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae TMA 21]
 gi|229351685|gb|EEO16626.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae B33]
 gi|229355546|gb|EEO20467.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae BX 330286]
 gi|229370243|gb|ACQ60666.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae MJ-1236]
 gi|254844653|gb|EET23067.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|297542432|gb|EFH78482.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 260

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R  IP   + +L LLK 
Sbjct: 141 GAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKT 200

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++L   +G  D+V +       T             Y++++I+   F +     + L E+
Sbjct: 201 TALVSIIGLEDMVRISSLAAGSTKMPFT-------FYMAVAIIFLFFTSVSTGLLKLLER 253

Query: 398 K 398
           K
Sbjct: 254 K 254


>gi|254229408|ref|ZP_04922824.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio sp. Ex25]
 gi|262396868|ref|YP_003288721.1| arginine ABC transporter permease protein ArtM [Vibrio sp. Ex25]
 gi|151938099|gb|EDN56941.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio sp. Ex25]
 gi|262340462|gb|ACY54256.1| arginine ABC transporter permease protein ArtM [Vibrio sp. Ex25]
          Length = 222

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAE 283
           L  G P LV I L Y      P  GQF+ +  S     +S  +    +AL+  TAA+  +
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDVVRESVFWTWLSQPWFCAMLALALNTAAYSTQ 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA  
Sbjct: 109 LFKGAFNAIPSGQWQACRALGM-NKTATLKVLLPYAIRRAVPAYSNEVILVFKGTSLAST 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 168 ITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|317401749|gb|EFV82368.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 222

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 24/162 (14%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L +               QF+         E  +  +A++    A
Sbjct: 68  PFLIQLFFVFFGLPSLGV---------------QFS---------EMQAACLAMALNLGA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI+R+G+ A P+GQ EA  +L +T  +  R V+L  A+  I P L+SQ + ++  S+
Sbjct: 104 YSAEIIRAGIDATPKGQYEAGASLAMTRLQVFRHVVLKPALARIWPALSSQIVIVMLGSA 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   +   DL      I ++  +A E+  +   IYL L++++
Sbjct: 164 VCSQIAAEDLTFAANFIQSRNFRAFEVYFVTTGIYLVLAVLL 205


>gi|315925537|ref|ZP_07921747.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621078|gb|EFV01049.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 216

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 20/175 (11%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    F+ FGLP   +  +   L FD+                 F +  +A +  
Sbjct: 59  RGTPLLLQLFFVYFGLP--FIPGIGKVLMFDR-----------------FTAACVAFALN 99

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEI R GL+A+  GQ EAA  LGLT  +    +++PQ +R  +P ++++ + L+K
Sbjct: 100 YAAYFAEIFRGGLLAINDGQYEAAKVLGLTRGQTMLHIIIPQMIRVSLPSVSNETIVLVK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++L  A+   +++      + +       I+    IYL ++ +I L   +L  K
Sbjct: 160 DTALVTAIAVPEIMYYAKGAVVRDADTTAFIVAGG-IYLVINFVITLIFKQLEKK 213


>gi|229523881|ref|ZP_04413286.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae bv. albensis VL426]
 gi|229337462|gb|EEO02479.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae bv. albensis VL426]
          Length = 260

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R  IP   + +L LLK 
Sbjct: 141 GAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKT 200

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++L   +G  D+V +       T             Y++++I+   F +     + L E+
Sbjct: 201 TALVSIIGLEDMVRISSLAAGSTKMPFT-------FYMAVAIIFLFFTSVSTGLLKLLER 253

Query: 398 K 398
           K
Sbjct: 254 K 254


>gi|213971835|ref|ZP_03399937.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301383372|ref|ZP_07231790.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302064065|ref|ZP_07255606.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302134967|ref|ZP_07260957.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213923381|gb|EEB56974.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 221

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 85/155 (54%), Gaps = 7/155 (4%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           P   ++A+  +L  + P L Q  F F G    G  +S E+ +  +A+     A+  EI+R
Sbjct: 52  PFATILAIYVELIRNTPFLVQLFFIFFGLPSLGVQIS-EWQAAVLAMVINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|115351506|ref|YP_773345.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|172060525|ref|YP_001808177.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115281494|gb|ABI87011.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|171993042|gb|ACB63961.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 259

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 25/234 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSR---HFHEKTGKALPLL---YI 224
           S P L        K  V S V G    ++L++   R S     F      AL  L   Y+
Sbjct: 39  SLPVLAQGAVLTVKFAVLSMVFGLLGAVMLAMMGIRQSEPLEGFERIWVNALAWLARAYV 98

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 99  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 145

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 146 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 205

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L+     +I  T Q + + L    +Y  L  ++         +++L  + 
Sbjct: 206 TVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPARH 259


>gi|257067018|ref|YP_003153274.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
 gi|256798898|gb|ACV29553.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
          Length = 521

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 63/109 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++E+VR G+ ++ +GQ EA  A+G+TH +    V+LPQ + +I+P + ++++
Sbjct: 386 VSINTGAYLSEVVRGGINSIDKGQFEACKAIGMTHFQTMVHVILPQTILTILPSIGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +K++S+   +   +L  +  ++   T Q     LI   IY  L+  I
Sbjct: 446 INIKDTSVLNVISVTELFFMSKSVAGSTYQYFPTYLITAVIYFVLTFTI 494


>gi|115352501|ref|YP_774340.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|170703754|ref|ZP_02894469.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|172061358|ref|YP_001809010.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115282489|gb|ABI88006.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|170131337|gb|EDS99949.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171993875|gb|ACB64794.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 229

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 10/133 (7%)

Query: 224 ISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           + T LI G+P LVL+     +L+  L+     LG         + P F++  + L     
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNSATDALGWDQI----DIDP-FLAGVLVLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   ++VPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  L+K++
Sbjct: 107 AYFTETFRGAFLSVPRGQLEAGSAYGMTSWQVFARIMFPQMMRFALPGIGNNWQVLVKST 166

Query: 339 SLAVAVGFADLVS 351
           +L   +G AD+V 
Sbjct: 167 ALVSIIGLADVVK 179


>gi|254449531|ref|ZP_05062968.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Octadecabacter antarcticus 238]
 gi|198263937|gb|EDY88207.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Octadecabacter antarcticus 238]
          Length = 223

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 24/206 (11%)

Query: 195 VLGIVLSLFAT------RLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFD 247
           +LG +++L A       R+SR +        PL +++T ++ F   T + + L +  +F 
Sbjct: 27  ILGCIVALIAAFIAGLGRISRFW--------PLRWLATAYIEFFRGTSIFVQL-FWAYFV 77

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+LG         +SP   +  +AL     A+ AE+VR  + ++PR Q EA  AL LT 
Sbjct: 78  LPLLG-------VPLSP-LQAGVLALGLNVGAYGAEVVRGAIKSIPREQYEACTALNLTR 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+LPQA   ++P   +  + LLK +++   +  +D+      +  QTG      
Sbjct: 130 FQEMRHVILPQAFVRMLPTFGNNAIELLKGTAVVSLISLSDMTFQAQIVRAQTGSTAIPF 189

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           L  + +Y   S  I+  + RL  +++
Sbjct: 190 LTILLLYFLFSSTISTAIKRLERRLS 215


>gi|260772506|ref|ZP_05881422.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           metschnikovii CIP 69.14]
 gi|260611645|gb|EEX36848.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           metschnikovii CIP 69.14]
          Length = 246

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +GQ+EAA A G++     R +LLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAMMAVDKGQLEAAKAYGMSGLLTFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             +P   + +L LLK ++L   +G  D+V V
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRV 201


>gi|224827115|ref|ZP_03700211.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224600624|gb|EEG06811.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 229

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 19/217 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPT 234
           LT++  A   V S VLG++ ++F    SR        +    + +P L     L FG   
Sbjct: 16  LTLEVAAASLVVSVVLGLIGAMFKMAHSRALVWSAELYSTVVRGVPDLVWMFLLFFGGQM 75

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+             V  +F  +G   ++P    + + +     A++ E  R  +++VP+
Sbjct: 76  LI-----------NDVAERFG-LGAPEINPMIAGV-LTIGFIFGAYMTETFRGAIMSVPK 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA  A G++  +    +  PQ +R  +P  ++ +L L+K+++L   +G  D++    
Sbjct: 123 GQMEAGAAYGMSPLRVFFRITAPQMVRFALPSFSNNWLVLVKSTALVSVIGLNDMMYKAD 182

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  + T +   + ++   IYL ++ +  + +N +N +
Sbjct: 183 TAKSITQEPFTVYMVVAAIYLLITTVSIVALNAMNKR 219


>gi|209521572|ref|ZP_03270271.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209497983|gb|EDZ98139.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 229

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI  +P LVL+ L  Y +        D   L QF+      + P F++  + L     
Sbjct: 54  TTLIRSVPDLVLMLLLFYSIQMAVNDVTDALDLPQFD------IDP-FVAGVLTLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K +
Sbjct: 107 AYFTETFRGAFLAVPRGQLEAGSAYGMSGMRVFTRILFPQMMRFALPGIGNNWQVLVKAT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +G AD+V         T      IL+   IYL+++
Sbjct: 167 ALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAIT 206


>gi|134276958|ref|ZP_01763673.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|167825105|ref|ZP_02456576.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 9]
 gi|167895193|ref|ZP_02482595.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 7894]
 gi|167903579|ref|ZP_02490784.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei NCTC 13177]
 gi|167919826|ref|ZP_02506917.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei BCC215]
 gi|217420477|ref|ZP_03451982.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|226199915|ref|ZP_03795465.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|254184251|ref|ZP_04890841.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1655]
 gi|254191285|ref|ZP_04897789.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254296910|ref|ZP_04964363.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 406e]
 gi|134250608|gb|EBA50687.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|157807034|gb|EDO84204.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 406e]
 gi|157938957|gb|EDO94627.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184214782|gb|EDU11825.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1655]
 gi|217395889|gb|EEC35906.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|225927971|gb|EEH24008.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
          Length = 229

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 7/213 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ V S    ++L L    +++  H +  +A+   Y  T LI  +P LVL+ L +  +  
Sbjct: 19  ELSVLSLAAAVLLGLVGA-VAKLSHNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSI 73

Query: 248 KPVLGQF-NFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  L QF + +    +  + F++  + L     A+  E  R   +AVPRGQ+EA  A G+
Sbjct: 74  QIWLNQFTDLMSWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGM 133

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         T     
Sbjct: 134 NGMRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFF 193

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            IL+   IYL+++    L + +L  + ++  + 
Sbjct: 194 FILVAALIYLAITTASNLVLGQLEKRYSIGVRH 226


>gi|323494402|ref|ZP_08099511.1| ABC-type transport system permease protein [Vibrio brasiliensis LMG
           20546]
 gi|323311332|gb|EGA64487.1| ABC-type transport system permease protein [Vibrio brasiliensis LMG
           20546]
          Length = 255

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 65/114 (57%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +IAL+   A +  E++R  L  VP+G++EAA ++G++     R + LP+A++ I+P L  
Sbjct: 129 FIALTLSFAGYEGEVMRGALKGVPKGELEAAHSMGMSRWLVLRRIWLPRAIQRILPTLNG 188

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + +  LK + L   + F D+ +V   +  +T    E +++   IYL ++ +I L
Sbjct: 189 EVILQLKATPLVATISFVDIFAVFSRVRQETYIIYEPLILLAVIYLIIAGLITL 242


>gi|261400796|ref|ZP_05986921.1| amino acid ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
 gi|269209398|gb|EEZ75853.1| amino acid ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
          Length = 222

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+ R+  R + LPQ++R  +P   + +  ++
Sbjct: 99  WGIAEMGDLVRGALESIEKHQVESGLALGLSRRQVFRYIELPQSVRRALPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|104784120|ref|YP_610618.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95113107|emb|CAK17835.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 230

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 13/188 (6%)

Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----E 265
           KT    PL ++    + L+ G+P L+ + L Y   F    +G  N +G     P      
Sbjct: 41  KTSSVKPLQWLGGTYSTLVRGVPELLWVLLIY---FG--TVGLMNSLGALFNMPGLELSA 95

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  T +      +   IYL L+++    M
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIGVTVTKEPFTFYAVAACIYLGLTVIAMTGM 215

Query: 386 NRLNAKIA 393
           + L  + A
Sbjct: 216 HFLEKRAA 223


>gi|83748010|ref|ZP_00945040.1| asparagine transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|207738690|ref|YP_002257083.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725312|gb|EAP72460.1| asparagine transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|206592058|emb|CAQ58964.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 223

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 22/194 (11%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           V+GI L   A  L+ +  +   + L  L   Y++  ++  +P L+L+ L +   F  P L
Sbjct: 27  VIGIPLGGLAGTLAAYAVQSRSRVLAGLARGYVA--MVRNVPYLILVYLSF---FGLPKL 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           G         V    M+  +A+ C   YT  +  EI+R+ L +VPRGQ  AA++LG++  
Sbjct: 82  G---------VPASAMA--VAIGCTALYTGGYFCEILRAALHSVPRGQSGAALSLGMSRW 130

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T    EI+ 
Sbjct: 131 QVQRYIVAPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYTEILA 190

Query: 369 IWMFIYLSLSIMIA 382
               IY + S+++A
Sbjct: 191 ATAAIYWASSVLLA 204


>gi|55821173|ref|YP_139615.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823086|ref|YP_141527.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|116627890|ref|YP_820509.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|55737158|gb|AAV60800.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739071|gb|AAV62712.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
 gi|116101167|gb|ABJ66313.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 216

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEI+R GL ++  GQ EA ++ G  +R+    ++ PQA+R ++P + SQ+
Sbjct: 87  SFTVFTSAALAEIIRGGLNSIDHGQTEAGLSQGFNNRQIFIYIIFPQAIRKMLPSIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 147 VTVVKDTSFLYSV 159



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T +L+F  ++ +T+ GT++   R   N ++ WI  +YVE  RN+P L+ IF ++
Sbjct: 16  GLWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYVEFVRNVPNLLWIFIIF 73


>gi|222082603|ref|YP_002541968.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727282|gb|ACM30371.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 249

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 87/166 (52%), Gaps = 10/166 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSG 288
           PTLV      QL F   VL     N +GG+  +P   F  +   +  + AA  A+ +R+G
Sbjct: 83  PTLV------QLMFSFLVLNTLVSNILGGAQNNPLSPFFWVVAVVGLHVAALHADAIRAG 136

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP   +EAA A+G +  +  R V  P A+R+ +P L +  +NL+K +++  A+  ++
Sbjct: 137 IEAVPEQTVEAARAIGFSRLQILRFVEAPLAIRASLPALVNNLINLVKLTTVGNAIAVSE 196

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +      +  Q    +E++++ +  + ++++ +A   + +  ++A+
Sbjct: 197 ITYASIMVWTQRDNVVELMIVILLFFSAINLAVARIGHWVEKRLAV 242


>gi|254508516|ref|ZP_05120634.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio parahaemolyticus 16]
 gi|219548541|gb|EED25548.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio parahaemolyticus 16]
          Length = 225

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 59/105 (56%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++H    R ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSHFMTYRRIILPSALRRALPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ +I
Sbjct: 162 GSAVAGIVTIVDLTGAARLVNSRYYAPFESFLTAGLFYMALTFII 206


>gi|15595510|ref|NP_249004.1| L-cysteine transporter of ABC system YecS [Pseudomonas aeruginosa
           PAO1]
 gi|107099295|ref|ZP_01363213.1| hypothetical protein PaerPA_01000307 [Pseudomonas aeruginosa PACS2]
 gi|116054040|ref|YP_788483.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218889053|ref|YP_002437917.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254243411|ref|ZP_04936733.1| hypothetical protein PA2G_04225 [Pseudomonas aeruginosa 2192]
 gi|296386807|ref|ZP_06876306.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313112074|ref|ZP_07797858.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|9946159|gb|AAG03702.1|AE004469_7 L-cysteine transporter of ABC system YecS [Pseudomonas aeruginosa
           PAO1]
 gi|115589261|gb|ABJ15276.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126196789|gb|EAZ60852.1| hypothetical protein PA2G_04225 [Pseudomonas aeruginosa 2192]
 gi|218769276|emb|CAW25036.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310884360|gb|EFQ42954.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 230

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 26/208 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG++L  F+  + R         +  +Y+S F   G P LV I   + L++  P +G
Sbjct: 39  SMVLGLILG-FSVAVVRVTKVPVVSQIAAVYVSAF--RGTPLLVQI---FVLYYGLPSVG 92

Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +F  +             +AL+   AA+++E +R  ++ + +GQ EA +++GLT  +  
Sbjct: 93  IEFTPVTAGI---------LALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTL 143

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++ PQA+R  +P L++  ++L+K++SL   +   +L+     +I +T Q + + L   
Sbjct: 144 WNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAA 203

Query: 372 FIYLSLSIMIALF-------MNRLNAKI 392
            IY  LS   ALF        NRL A +
Sbjct: 204 GIYWLLS---ALFERVQKALENRLTAPL 228


>gi|331002712|ref|ZP_08326227.1| hypothetical protein HMPREF0491_01089 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330407125|gb|EGG86629.1| hypothetical protein HMPREF0491_01089 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 227

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 28/158 (17%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIALSCYT 277
           PLL    F+ +GLP       K  +  D  + G F   F+GGS                 
Sbjct: 72  PLLIQLFFIYYGLP-------KLGIKVDADICGVFGLAFLGGS----------------- 107

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++ E  RSG+  + + Q E+A++LGL+H +A   +LLPQA+    P   +  + LLK 
Sbjct: 108 --YMCEAFRSGIETIDKIQEESALSLGLSHNQALFYILLPQAVSISTPAFVANIIFLLKE 165

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +S+  A+   DL+     +I    + +E + + +F YL
Sbjct: 166 TSVFSAISLMDLMFTAKDLIGLYYKTVESLALLVFFYL 203


>gi|296113906|ref|YP_003627844.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           RH4]
 gi|295921600|gb|ADG61951.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           RH4]
 gi|326562227|gb|EGE12555.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           7169]
 gi|326567181|gb|EGE17303.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           BC1]
 gi|326572017|gb|EGE22019.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           BC8]
 gi|326573964|gb|EGE23914.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           O35E]
 gi|326574955|gb|EGE24885.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           101P30B1]
          Length = 240

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 12/175 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P L +  F+ FG  +++L+ +  Q+ +            G     +F +   ALS  
Sbjct: 59  RGIPELLMVFFIFFG-GSIILVTIAKQMGYT-----------GRIDVSQFWAGVTALSIM 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+  E+ R  +  +P+GQ E+A ++G+T  +    ++LPQ     +P L +  L LLK
Sbjct: 107 FGAYATEVFRMAIQDIPKGQWESAQSIGMTPIQTLTRIILPQMWMVALPGLGNLTLVLLK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++L   +G  DL+         T +     L   FIYL+L+ +I LF+    ++
Sbjct: 167 DTALVSLIGLQDLMYFAQRAAQSTQKPFTFYLAAAFIYLALTSVITLFIMWCESR 221


>gi|288961243|ref|YP_003451582.1| octopine/nopaline transport system permease protein [Azospirillum
           sp. B510]
 gi|288913551|dbj|BAI75038.1| octopine/nopaline transport system permease protein [Azospirillum
           sp. B510]
          Length = 249

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 21/194 (10%)

Query: 167 FGMFLNNRGLSFPTL-----TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           F +FL   G   P L     T+  +    V   VLG +L+    R++  F  +T      
Sbjct: 18  FDLFLGPNGWGLPLLCAALMTVALSVSGLVVGAVLGALLAY--ARIAGGFIARTAAD--- 72

Query: 222 LYISTFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             I+T L  G+P L++I L Y      L +     G   FIG     P F++  +AL   
Sbjct: 73  -AITTVL-RGVPDLLVIYLFYFGGSQILSWIGNAAGYGGFIG----LPVFLTGVLALGVV 126

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ AE+ R     +PRGQ+E+A A G+      R VL PQ  R  +P + + +  +LK
Sbjct: 127 SAAYQAEVFRGAFNVIPRGQIESARAAGMGPLLMFRRVLAPQVFRHALPGMGNVWQLILK 186

Query: 337 NSSLAVAVGFADLV 350
           +S+L   +G  +L+
Sbjct: 187 DSALISVIGLVELL 200


>gi|220932710|ref|YP_002509618.1| polar amino acid ABC transporter, inner membrane subunit
           [Halothermothrix orenii H 168]
 gi|219994020|gb|ACL70623.1| polar amino acid ABC transporter, inner membrane subunit
           [Halothermothrix orenii H 168]
          Length = 222

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 68/124 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S  +AA+ AE +R  + +V  GQ+ AA ++G+   +    V+LPQA+  +IP  T++
Sbjct: 93  IGFSLNSAAYQAEYLRGSIKSVSEGQLRAAYSIGMGKWQGIFYVVLPQALIKVIPSWTNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ LLK +SLA  +G  ++++    + ++  +  +  L+   IYL + +      N L  
Sbjct: 153 FIYLLKYTSLAYIIGAPEMMAQAKLLASRNYEYFKTYLVAAGIYLIVVLFFTSIFNWLEK 212

Query: 391 KIAL 394
           K ++
Sbjct: 213 KYSI 216


>gi|322508068|gb|ADX03522.1| Putative amino acid transport protein [Acinetobacter baumannii
           1656-2]
 gi|323517650|gb|ADX92031.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 211

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 28/182 (15%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F+ +  +  PLL    FL +GLP L    +K    F   V+G   F+GGS         
Sbjct: 46  QFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFACGVIG-LTFLGGS--------- 91

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
                     ++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +
Sbjct: 92  ----------YMAEAFRAGLQSVAKGQIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGA 141

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFM 385
             L L+K SS+  A+   +L+ V   +I    +  E    +I+ ++ I L +SI+ +   
Sbjct: 142 NCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLE 201

Query: 386 NR 387
           +R
Sbjct: 202 HR 203


>gi|293392694|ref|ZP_06637013.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291424811|gb|EFE98021.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 218

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 1/108 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  VSP + +  +AL+ +T+AF+ +I    + A+P+GQ EAA  LGL   +    V++PQ
Sbjct: 80  GIDVSP-WAAAALALTLFTSAFLVDIWSGSIAALPKGQWEAARCLGLGFGQTLLRVIVPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           A+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++
Sbjct: 139 AVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKV 186


>gi|224825590|ref|ZP_03698695.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224602511|gb|EEG08689.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 229

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 90/189 (47%), Gaps = 16/189 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIST 226
           MFL   G      T+ T  K+ + S +L +++ L   + +LS H         PL Y++T
Sbjct: 1   MFLQGFGPLIFEGTLQT-IKLALVSMLLSVLIGLVGASAKLSSH--------RPLRYLAT 51

Query: 227 F---LIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               LI  +P LV ++ L Y L      L  +  I    + P F++  + L     A+  
Sbjct: 52  AYTTLIRSVPDLVIMLLLFYSLQILLNQLTDWAGIEQIDIDP-FLAGVVTLGFIYGAYFT 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R    AVPRGQ+EAA A G+      R VL PQ MR  +P + + +  ++K ++L  
Sbjct: 111 ETFRGAFQAVPRGQLEAATAYGMKPWLVFRRVLFPQMMRFALPGIGNNWQVMIKATALVS 170

Query: 343 AVGFADLVS 351
            +G AD+V 
Sbjct: 171 IIGLADIVK 179


>gi|313900722|ref|ZP_07834215.1| putative arginine ABC transporter, permease protein ArtQ
           [Clostridium sp. HGF2]
 gi|312954784|gb|EFR36459.1| putative arginine ABC transporter, permease protein ArtQ
           [Clostridium sp. HGF2]
          Length = 213

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 35/208 (16%)

Query: 193 SFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           SFVL   L +   RLSR+        F+    +  PLL    F+ FGLP L        +
Sbjct: 29  SFVLA--LPMVYVRLSRNAVVSTIVRFYIYIMRGTPLLLQLMFVYFGLPYL-------GI 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D+       F                L  YTA F  EI+R G+ ++  GQ EAA  LG
Sbjct: 80  RLDRTTAAILAF----------------LLNYTAYF-TEILRGGIQSIDEGQKEAAKLLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            ++      +LLPQA+R+ IP   ++ L LLK++ L   +G  +L+             +
Sbjct: 123 YSNSYTFLHILLPQALRNCIPSFINESLTLLKDTCLVSILGIDELLRYAKIAAGTYATGL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I + + IYL L++ I+  +N L  ++
Sbjct: 183 PFIYVGV-IYLVLNMPISRGLNYLEKRL 209


>gi|298485184|ref|ZP_07003278.1| amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298160296|gb|EFI01323.1| amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 221

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 83/154 (53%), Gaps = 5/154 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P   + A+  +L  + P L Q  F F G  ++     E+ +  +A+     A+  EIVR+
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +   
Sbjct: 112 GIQAIPKGQLEASAALAMNRYEAFRYVVLVPALSKVWPALSSQIIIVMLGSAVCSQIATE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 172 ELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|302540685|ref|ZP_07293027.1| amino acid ABC transporter, permease [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302458303|gb|EFL21396.1| amino acid ABC transporter, permease [Streptomyces himastatinicus
           ATCC 53653]
          Length = 256

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 64/112 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  ++L  + +A+++EI R+ +  +  GQ EA  ALGL        V+ PQA+R  +P
Sbjct: 92  FTAGCLSLIVFYSAYLSEIFRAAISGIHDGQTEAGEALGLGRLSVFGHVIFPQALRLALP 151

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
              +  ++LLK +SL V +  A+L+S    I + T +A+E+ L+   +Y +L
Sbjct: 152 GTNTMLVDLLKGTSLLVTISAAELMSEARLITSSTFRALEVYLVISAVYFAL 203


>gi|221067528|ref|ZP_03543633.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220712551|gb|EED67919.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 220

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 2/127 (1%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S+ + L+   +AF A+ +R+G+  +P  Q+EAA++LG+   +    V+LPQA+RS++ P+
Sbjct: 90  SVILTLTLVCSAFTADYLRAGINTIPGSQIEAALSLGMRPLQIVSAVVLPQALRSVVQPM 149

Query: 328 TSQYLNLLKNSSLAVAVGFA--DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           TS  + L+ ++SLA  + F   +L ++   I N +   I    +   +Y+   ++IA   
Sbjct: 150 TSLLIALMLSTSLASQLPFPGRELTALVSKIANDSALGIAAFAVAATMYVVTGLLIAWAG 209

Query: 386 NRLNAKI 392
             L  K+
Sbjct: 210 AVLEKKV 216


>gi|327193432|gb|EGE60331.1| octopine ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 232

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 11/168 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           + G+ +   Y+  F+  G P LV + L Y    Q       LG + F         +   
Sbjct: 47  EIGRTITRAYV--FVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFF-----REPYWCA 99

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL+  TAA+ +EI R G++AV   ++EAA A G++     R ++LP A+R  +P   +
Sbjct: 100 VLALTLNTAAYCSEIFRGGVLAVSAQEIEAARACGMSGILLFRRIILPIALRHALPAYGN 159

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           + + ++K ++LA  +   ++  + G +I  + +A EI ++   IYL++
Sbjct: 160 EIILMIKATALASVITIMEVTGLAGKLIADSFRAFEIFIVAGAIYLAI 207


>gi|254464505|ref|ZP_05077916.1| polar amino acid uptake family ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
 gi|206685413|gb|EDZ45895.1| polar amino acid uptake family ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
          Length = 253

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  QF +I  S + P     +    +AL+   A +  E
Sbjct: 88  IIRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGE 145

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R     V +GQ+EAA + G+      R V LPQA+R+++P L  + +  LK + L   
Sbjct: 146 VMRGAFSGVAKGQLEAAKSFGMPRFTIFRRVWLPQAVRNVLPTLGGETILQLKATPLVAT 205

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +   ++ +V   +   T    E +L+   +Y++++ +IAL   RL 
Sbjct: 206 ITVMEIYAVSSRVRADTFIVYEPLLLLALVYMAIAGVIALAFRRLE 251


>gi|84393752|ref|ZP_00992500.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84375614|gb|EAP92513.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 246

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 23/193 (11%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           ++ + S +L +VL +    L++    +  +A+  LY  T +I G+P LVL+ L +   Q+
Sbjct: 20  EVALLSLILAMVLGMLGA-LAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTA----------AFIAEIVRS 287
             +  +     ++     S +       ++  YI +S + A          A++AE  R 
Sbjct: 77  LLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRG 136

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++AV  G+MEAA A G+    A R +LLPQ +R  +P   + +L LLK ++L   +G  
Sbjct: 137 AIMAVDSGEMEAAKAYGMGPVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLE 196

Query: 348 DLVSVGGTIINQT 360
           D+V V       T
Sbjct: 197 DMVRVSALAAGST 209


>gi|325972549|ref|YP_004248740.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta sp. Buddy]
 gi|324027787|gb|ADY14546.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 266

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 68/122 (55%), Gaps = 4/122 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE VR G+++V  GQ E A A+G+ H +    V+LPQA+R+I+P + +  +
Sbjct: 116 VSINTGAYMAETVRGGILSVDNGQTEGAKAIGMNHFQTMLTVILPQALRNIMPQIGNNLI 175

Query: 333 NLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             +K++ +   +G  +L     S+ G +      A  I++I+  +    S ++  + NR+
Sbjct: 176 INIKDTCVLSIIGTVELFFTFKSISGALYTYFEAATVILIIYFILTFVSSRILLAWENRM 235

Query: 389 NA 390
           + 
Sbjct: 236 DG 237


>gi|227511851|ref|ZP_03941900.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227084941|gb|EEI20253.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
          Length = 223

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS     ++AE  RS  ++V  GQ++AA ++G+T   A R ++LPQA    IP + +  
Sbjct: 96  GLSVGWGGYMAEAFRSAYLSVDEGQIKAAYSVGMTGETALREIILPQAFLIAIPNVENLL 155

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAIEIILIWMFIYLSLSIMI 381
           + LLK +SL   +G AD+      +  +NQ    ++I +I   IY  L+ +I
Sbjct: 156 IGLLKATSLVYVIGLADMYQNASNLSNVNQGVYQLKIFIILALIYWILASLI 207


>gi|184157758|ref|YP_001846097.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|294842164|ref|ZP_06786847.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. 6014059]
 gi|183209352|gb|ACC56750.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii ACICU]
          Length = 219

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 28/182 (15%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F+ +  +  PLL    FL +GLP L    +K    F   V+G   F+GGS         
Sbjct: 54  QFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFACGVIG-LTFLGGS--------- 99

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
                     ++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +
Sbjct: 100 ----------YMAEAFRAGLQSVAKGQIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGA 149

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFM 385
             L L+K SS+  A+   +L+ V   +I    +  E    +I+ ++ I L +SI+ +   
Sbjct: 150 NCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLE 209

Query: 386 NR 387
           +R
Sbjct: 210 HR 211


>gi|29653826|ref|NP_819518.1| arginine ABC transporter permease [Coxiella burnetii RSA 493]
 gi|153208871|ref|ZP_01947093.1| arginine ABC transporter, permease protein [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154707334|ref|YP_001424931.1| arginine transport system permease protein [Coxiella burnetii
           Dugway 5J108-111]
 gi|161831604|ref|YP_001596413.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA
           331]
 gi|165920607|ref|ZP_02219578.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA
           334]
 gi|212218911|ref|YP_002305698.1| arginine transport system permease protein [Coxiella burnetii
           CbuK_Q154]
 gi|29541089|gb|AAO90032.1| arginine transport system permease protein [Coxiella burnetii RSA
           493]
 gi|120575660|gb|EAX32284.1| arginine ABC transporter, permease protein [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154356620|gb|ABS78082.1| arginine transport system permease protein [Coxiella burnetii
           Dugway 5J108-111]
 gi|161763471|gb|ABX79113.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA
           331]
 gi|165916809|gb|EDR35413.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA
           334]
 gi|212013173|gb|ACJ20553.1| arginine transport system permease protein [Coxiella burnetii
           CbuK_Q154]
          Length = 221

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T  I GLP L+++   + ++F    L    F     VS  F +  +AL    AA+  + +
Sbjct: 55  TAFIRGLPELLVL---FAIYFGGSALLTKLFHRSVQVS-AFSAGVLALGMIFAAYATQTL 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L+A+P+GQ EA  A+GL      + ++LPQA    +P L + +L LLK+S+L   +G
Sbjct: 111 RGALLAIPKGQTEAGKAMGLPGWIIFKRIVLPQAWHHALPGLGNLWLVLLKDSALVALIG 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             DL++      + T +  +  ++  F++L L+
Sbjct: 171 LGDLMNKAQLAASTTREPFKFYVMAAFLFLLLT 203


>gi|86136435|ref|ZP_01055014.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85827309|gb|EAQ47505.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 258

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 6/173 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  QF +I  S + P     +    +AL+   A +  E
Sbjct: 88  VIRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVMALTLSYAGYEGE 145

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R     V +GQ+EAA + G+      R + LPQA+R+++P L  + +  LK + L   
Sbjct: 146 VMRGAFSGVAKGQLEAAKSFGMPRFTMFRRIWLPQAIRNVLPTLGGETILQLKATPLVAT 205

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   ++ +V   + + T    E +L+    Y+ ++ +I L   R  A+I  + 
Sbjct: 206 ITVVEIYAVSSRVRSDTFIVYEPLLLLALAYMVIAGLIGLAFKRFEARIPQRR 258


>gi|329118222|ref|ZP_08246932.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465643|gb|EGF11918.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 225

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 268 SLYIALSCYTAAFIAE---IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            L++ +  +T   +AE   +VR  L +V + Q E+A+ALGL+ R+    + LPQ++R ++
Sbjct: 91  GLWVCVWVFTLWGVAEMGDLVRGALESVEKHQTESALALGLSRRQVFVYIELPQSVRRVL 150

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P   + +  ++K SSLA  +G  ++V VG  II  +
Sbjct: 151 PGAINLFTRMIKTSSLASLIGVIEVVKVGQQIIENS 186


>gi|213859967|ref|ZP_03385671.1| polar amino acid ABC transporter, inner membrane subunit
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
          Length = 87

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 43/58 (74%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+
Sbjct: 30  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRA 87


>gi|115359033|ref|YP_776171.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115284321|gb|ABI89837.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 231

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 18/203 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +F L + L++  T   R     T      L++S F   G P LV I   + L++    L
Sbjct: 32  LAFALAVPLAVARTSACRWLSTPT-----RLFMSVFR--GTPLLVQI---FVLYYG---L 78

Query: 252 GQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            QF+ +  S     V   F     AL+   AA++AE +R G+  VP G+ EAA+A G++ 
Sbjct: 79  AQFSIVRASPLWLLVGGSFSCALCALTLNLAAYMAEDIRGGIAGVPAGEKEAALAFGMSR 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
              T  V++P+A+  + P L ++ +  LK+++LA  +   DL  V   I  +T    + +
Sbjct: 139 FMLTWFVIVPRAIGIVAPTLGNEIVLQLKSTALASTITVLDLTGVARRISIET-YTTDAL 197

Query: 368 LIWMFIYLSLSIMIALFMNRLNA 390
           ++   +Y+ ++ +++  + R+  
Sbjct: 198 MLAGIVYVGITAVLSTVLKRVEG 220


>gi|312278894|gb|ADQ63551.1| Amino acid (Glutamine) ABC transporter permease protein
           [Streptococcus thermophilus ND03]
          Length = 225

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 57/106 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I  + +  A + ++VR  + ++PR Q E+  ALGLT+ +    V++PQ +R ++P 
Sbjct: 93  LSAIIVFTLWGTAEMGDLVRGSITSLPRHQFESGRALGLTNGQLYTYVIIPQVLRRLLPQ 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 153 AINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|53720000|ref|YP_108986.1| histidine transport system permease [Burkholderia pseudomallei
           K96243]
 gi|76809420|ref|YP_334237.1| histidine transport system permease [Burkholderia pseudomallei
           1710b]
 gi|126441376|ref|YP_001059756.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126453531|ref|YP_001067042.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106a]
 gi|167720505|ref|ZP_02403741.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei DM98]
 gi|167739496|ref|ZP_02412270.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 14]
 gi|167816702|ref|ZP_02448382.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 91]
 gi|167846610|ref|ZP_02472118.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei B7210]
 gi|237813150|ref|YP_002897601.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242315151|ref|ZP_04814167.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254195799|ref|ZP_04902225.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei S13]
 gi|254261920|ref|ZP_04952974.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1710a]
 gi|52210414|emb|CAH36396.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|76578873|gb|ABA48348.1| histidine transport system permease protein [Burkholderia
           pseudomallei 1710b]
 gi|126220869|gb|ABN84375.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126227173|gb|ABN90713.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|169652544|gb|EDS85237.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei S13]
 gi|237504845|gb|ACQ97163.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242138390|gb|EES24792.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254220609|gb|EET09993.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1710a]
          Length = 229

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 6/182 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPE-FMSL 269
           H +  +A+   Y  T LI  +P LVL+ L +  +  +  L QF + +    +  + F++ 
Sbjct: 42  HNRVLRAIATGY--TTLIRSVPDLVLMLLLF--YSIQIWLNQFTDLMSWDQIDIDPFVAG 97

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L     A+  E  R   +AVPRGQ+EA  A G+   +    ++ PQ MR  +P + +
Sbjct: 98  VLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMNGMRVFARIMFPQMMRFALPGIGN 157

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +  L+K ++L   +G AD+V         T      IL+   IYL+++    L + +L 
Sbjct: 158 NWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTASNLVLRQLE 217

Query: 390 AK 391
            +
Sbjct: 218 KR 219


>gi|254286779|ref|ZP_04961733.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|297579380|ref|ZP_06941308.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|150423206|gb|EDN15153.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|297536974|gb|EFH75807.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 260

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE  R  ++AV +G++EAA A G++   + R +LLPQ +R  IP   + +L LLK 
Sbjct: 141 GAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLKT 200

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++L   +G  D+V +       T             Y++++I+   F +     + L E+
Sbjct: 201 TALVSIIGLEDMVRISSLAAGSTKMPFT-------FYMAVAIIFLFFTSVSTGLLKLLER 253

Query: 398 K 398
           K
Sbjct: 254 K 254


>gi|86357759|ref|YP_469651.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86281861|gb|ABC90924.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 232

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 9/155 (5%)

Query: 227 FLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+  G P LV + L Y    Q       LG + F         +    +AL+  TAA+ +
Sbjct: 58  FVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFF-----REPYWCAVLALTLNTAAYCS 112

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL+AV   ++EAA A G++     R ++LP A+R  +P   ++ + ++K ++LA 
Sbjct: 113 EIFRGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGNEIILMIKATALAS 172

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +   ++  + G +I  + +A EI ++   IYL++
Sbjct: 173 VITIMEVTGLAGKLIADSFRAFEIFIVAGAIYLAI 207


>gi|260598728|ref|YP_003211299.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Cronobacter turicensis z3032]
 gi|260217905|emb|CBA32479.1| Histidine transport system permease protein hisQ [Cronobacter
           turicensis z3032]
          Length = 228

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 26/218 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLI- 238
           +T++      V S  +G+V +    +LSR+      + L L++ + T LI G+P LVL+ 
Sbjct: 15  VTLELALSAVVLSVAIGLVGA--GAKLSRN------RPLALVFEAYTTLIRGVPDLVLML 66

Query: 239 ----ALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                L+  L+     LG  QF+      + P    + I L     A+  E  R   +AV
Sbjct: 67  LIFYGLQIALNSVTDALGFSQFD------IDPMIAGI-ITLGFIYGAYFTETFRGAFLAV 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRG +EAA A G T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V  
Sbjct: 120 PRGHIEAATAFGFTGSQTFRRILFPSMMRYALPGIGNNWQVILKATALVSLLGLEDVVKA 179

Query: 353 GGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
                  T Q     ++   IYL   +LS  + L + R
Sbjct: 180 TQLAGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLER 217


>gi|54293481|ref|YP_125896.1| hypothetical protein lpl0530 [Legionella pneumophila str. Lens]
 gi|53753313|emb|CAH14760.1| hypothetical protein lpl0530 [Legionella pneumophila str. Lens]
          Length = 215

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 66/121 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    ++A+ AEI+R+G+ ++P+GQ EAA+ L +      + ++LPQ  R+I P + ++
Sbjct: 88  VAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPTFYLWKDIILPQVARNIFPAMINE 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL+    T+  Q       + I  F Y SL +++     ++  
Sbjct: 148 MIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFYYYSLVLLLEALGKKIEK 207

Query: 391 K 391
           +
Sbjct: 208 R 208


>gi|291616826|ref|YP_003519568.1| OccQ [Pantoea ananatis LMG 20103]
 gi|291151856|gb|ADD76440.1| OccQ [Pantoea ananatis LMG 20103]
          Length = 243

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 14/195 (7%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVL----GQFNFIG 258
           A +LS H      + L  L     +IF G+P L++I   Y  +F    L    GQ     
Sbjct: 47  AAKLSSH------RPLRWLGEGYSVIFRGIPELLVI---YLFYFGGSGLITQIGQIFGAQ 97

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   +P F+   +A+   + ++ AE+ R+  +A+ RG++EAA+A G++  +  + +LLPQ
Sbjct: 98  GFIEAPPFLIGALAIGLISGSYQAEVYRAARLALSRGEVEAAVATGMSRWRIRQRILLPQ 157

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             R  +P L++ +   LK+S+L    G  +L+         T       LI    YL L+
Sbjct: 158 VARYALPGLSNVWQMSLKDSALVSVTGIVELMRASQVAAGSTRDYFTFYLIGGGCYLLLT 217

Query: 379 IMIALFMNRLNAKIA 393
           ++      R+ A++ 
Sbjct: 218 VLSNRAFLRVEARLG 232



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 27/43 (62%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             ++G+ + A +LS+++ + W+   Y  +FR IP L+VI+  Y
Sbjct: 38  GAVVGSGIAAAKLSSHRPLRWLGEGYSVIFRGIPELLVIYLFY 80


>gi|167470083|ref|ZP_02334787.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           FV-1]
          Length = 217

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 10/169 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLH-FDKPV-LGQFNFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+++        L+ F+ P+ L   NF     VSP F+   I
Sbjct: 34  RGLPEILVVLFIYFGSSQLLMMLSDGFTLNLYLFELPIKLNLDNF----EVSP-FLCGVI 88

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +A+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 89  ALALLYSAYASQTLRGALKAVPIGQWESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQW 148

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++
Sbjct: 149 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAAAIYLVVTLL 197


>gi|302551654|ref|ZP_07303996.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469272|gb|EFL32365.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
          Length = 216

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 30/158 (18%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           SFVLG+V +L     SR      G      +  PLL    FL + LP       ++ L F
Sbjct: 33  SFVLGLVWALLMRVPSRWVTWPVGAVTEFVRNTPLLVQLFFLFYVLP-------EWGLTF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                G F                 A+  + + +  ++ R+G+ AVP GQ EAA AL L 
Sbjct: 86  SALSTGVF-----------------AIGLHYSTYTMQVYRAGIEAVPVGQWEAATALNLP 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+    V+LPQA+R +IP L +  + +LK++ + +A+
Sbjct: 129 LRRTWTAVILPQAVRRVIPALGNYVIAMLKDTPMLMAI 166


>gi|10954823|ref|NP_053243.1| hypothetical protein pTi-SAKURA_p004 [Agrobacterium tumefaciens]
 gi|16119838|ref|NP_396543.1| ABC transporter, membrane spanning protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
 gi|462723|sp|P35118|NOCQ_AGRT5 RecName: Full=Nopaline transport system permease protein nocQ
 gi|154754|gb|AAA50512.1| transport protein [Agrobacterium tumefaciens]
 gi|6498176|dbj|BAA87628.1| tiorf3 [Agrobacterium tumefaciens]
 gi|15163492|gb|AAK90984.1| ABC transporter, membrane spanning protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
          Length = 236

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 17/194 (8%)

Query: 193 SFVLGIVL-SLFAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           S+  GI+  SLFA  +LSR +  +      L  + T ++ G+P L++I L +   F    
Sbjct: 31  SYFFGIIFGSLFAAAKLSRFWSLRL-----LGDVYTTVVRGVPELLIIFLVF---FGGGT 82

Query: 251 L------GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           L      G F +  G    P F+   + +S    A+  E++R+ ++AVP GQ+EAA ++G
Sbjct: 83  LLRTIANGLFGY-EGYIEPPIFVIGVLCISVSAGAYATEVIRAAVLAVPPGQIEAAKSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R VL+PQA R  +P L + +   LK++SL   VG  +++         T Q  
Sbjct: 142 MGPWLRLRRVLIPQAARFALPGLGNVWQFTLKDTSLISVVGLVEIMRTAAMGAGSTKQPF 201

Query: 365 EIILIWMFIYLSLS 378
              +    I+L LS
Sbjct: 202 TFYITAFVIFLLLS 215


>gi|227529141|ref|ZP_03959190.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350985|gb|EEJ41276.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 227

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 98/190 (51%), Gaps = 16/190 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+F+ +LG++L+    R +R       + +  +Y++  L+ G P L+++ L Y   +  P
Sbjct: 30  FIFATLLGLLLTWVGLRKNR-----LAQGIATVYLN--LVRGTPPLLMLLLAY---YGLP 79

Query: 250 VLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           VL     IG +       M   + LS   + ++AE  RS  ++V  GQ+EAA ++G+  +
Sbjct: 80  VL--LKAIGINIDHWTRLMFGILGLSLGWSGYLAEAFRSAYLSVDTGQIEAARSVGMKDQ 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R ++LPQA    +P + +  + L+K +SL   +G  D+ +    + NQT    ++ +
Sbjct: 138 TTFRQIILPQAAILALPNIENLVVGLVKATSLVYVIGLYDMYNQASNLSNQTAGLHQLQI 197

Query: 369 IWMFIYLSLS 378
              FI L+LS
Sbjct: 198 ---FILLALS 204


>gi|325978427|ref|YP_004288143.1| inner membrane amino-acid ABC transporter permease [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325178355|emb|CBZ48399.1| inner membrane amino-acid ABC transporter permease protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 225

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A + ++VR  L ++P+ Q E+ +ALGLT  +    V++PQ +R ++P   + 
Sbjct: 97  IVFSMWGIAEMGDLVRGALTSLPKHQFESGLALGLTKPQLFIYVIIPQILRRLLPQAVNL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
              ++K +SL V +G  ++V VG  II      +    IW++
Sbjct: 157 MTRMIKTTSLIVLIGVVEVVKVGQQIIEANRLTVPSAAIWIY 198


>gi|224438001|ref|ZP_03658940.1| hypothetical protein HcinC1_08495 [Helicobacter cinaedi CCUG 18818]
 gi|313144447|ref|ZP_07806640.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129478|gb|EFR47095.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 218

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 52/88 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A ++++VR  + ++P+ Q+E+  ALGL   +    ++ PQA++ ++P + S 
Sbjct: 92  IVFSLWGIAEVSDLVRGAITSLPKHQVESGKALGLQQWQMMLYIIFPQALQRLLPSIVSL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              ++K +SL   +G ADL+ VG  II 
Sbjct: 152 STRMIKTTSLVALIGAADLLQVGQQIIE 179


>gi|330951202|gb|EGH51462.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 221

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 83/154 (53%), Gaps = 5/154 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P   + A+  +L  + P L Q  F F G  ++     E+ +  +A+     A+  EIVR+
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  SS+   +   
Sbjct: 112 GIQAIPKGQLEASAALAMNRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 172 ELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|308063766|gb|ADO05653.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           Sat464]
          Length = 240

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++F   +     +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 47  IISFILGLFIAVFVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 101

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 102 GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 154 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 213

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 214 YLEAALIYWLFCLVLEVIQKRVE 236


>gi|187779945|ref|ZP_02996418.1| hypothetical protein CLOSPO_03541 [Clostridium sporogenes ATCC
           15579]
 gi|187773570|gb|EDU37372.1| hypothetical protein CLOSPO_03541 [Clostridium sporogenes ATCC
           15579]
          Length = 221

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 58/85 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGT 355
           +++++K S+LA  +G  ++++V  +
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQS 180


>gi|322805718|emb|CBZ03283.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           H04402 065]
          Length = 221

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 58/85 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGT 355
           +++++K S+LA  +G  ++++V  +
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQS 180


>gi|330977256|gb|EGH77212.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 221

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 84/154 (54%), Gaps = 5/154 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P   + A+  +L  + P L Q  F F G  ++     E+ +  +A+     A+  EIVR+
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQ+EA+ AL ++  +A R V+L  A+  + P L+SQ + ++  SS+   +   
Sbjct: 112 GIQAIPKGQLEASAALAVSRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 172 ELSFYANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|325062837|gb|ADY66527.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 260

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +A  L Y+  F     P LVLI A  Y   F+    G  N+I      P+++   + L+ 
Sbjct: 86  RAPALTYVQIFR--NAPHLVLIFAATYIFPFEIVAFG--NYIP----FPDWIKAVVGLAI 137

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +A IAEI R  + ++P  Q EAA  LG +  +  R ++LPQ ++  +PP  + Y ++ 
Sbjct: 138 PASAHIAEITRGAIQSIPTAQWEAAQGLGFSRNQTLRWIILPQCVKRSLPPWMNLYASIT 197

Query: 336 KNSSLAVAVGFADLVSV---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++LA  VG  +L+       T + +    + + L  +  +      ++ F  RL  + 
Sbjct: 198 MGTALASLVGVHELLHAATDASTAVQRNDFTVVVYLTVLMAFFLFCYPVSRFTQRLERRF 257

Query: 393 ALK 395
           A +
Sbjct: 258 ASR 260


>gi|307609295|emb|CBW98771.1| hypothetical protein LPW_05701 [Legionella pneumophila 130b]
          Length = 215

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 66/121 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    ++A+ AEI+R+G+ ++P+GQ EAA+ L +      + ++LPQ  R+I P + ++
Sbjct: 88  VAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPTFYLWKDIILPQVARNIFPAMINE 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL+    T+  Q       + I  F Y SL +++     ++  
Sbjct: 148 MIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFYYYSLVLLLEALGKKIEK 207

Query: 391 K 391
           +
Sbjct: 208 R 208


>gi|222080931|ref|YP_002540294.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725610|gb|ACM28699.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 236

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 16/167 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           V G +LSL   RLSR       K +  +Y+  F    +P LV + + +   F   VLG F
Sbjct: 41  VFGTILSL--ARLSRTRLLLPVKIVAFVYVEVFR--RVPFLVTLLVFF---FGAQVLG-F 92

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +      +SP  ++L I+ S  + AF+AEI+R+GL AV   Q+EAA  +  +  +   LV
Sbjct: 93  D------ISPLVVTL-ISTSVISTAFVAEIIRAGLAAVRPSQLEAAEVMNFSPWQTLCLV 145

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
             PQA   I+PP+   ++  +K+++LA  +G  +L    G I+N  G
Sbjct: 146 RWPQAWPLILPPVFGYFVLFIKDTALASQIGVLELTQ-AGKILNTKG 191


>gi|145593975|ref|YP_001158272.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora tropica CNB-440]
 gi|145303312|gb|ABP53894.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora tropica CNB-440]
          Length = 320

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 16/220 (7%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYISTFLIFGLPTLVLIAL 240
           T+   A   V S V+G +L++   +L      + TG A PL Y+   L   L  +  + +
Sbjct: 79  TLTAAALAIVTSLVVGTLLAVLRIQLKSLAQRRYTGLAAPLAYLLRGLNRTLSAVTRVCV 138

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEF-------MSLYIALSCYTAAFIAEIVRSGLIAVP 293
             ++    PV+    F+      PEF         L I L+ Y +  IAEI+RSG+  + 
Sbjct: 139 --EVFRGLPVVITIFFVARGF--PEFGVTFNSLWYLVIGLTIYNSVVIAEILRSGMQGLA 194

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA A+GL+  + TR++LLPQA R ++P L SQ + +LK++SL   + + + +++G
Sbjct: 195 GGQAEAAAAIGLSPLQTTRMILLPQAFRIMLPALISQLVVVLKDTSLGFIISYEETLNIG 254

Query: 354 GTIINQTGQAIEI--ILIWMFIYL--SLSIMIALFMNRLN 389
             II      I++  +L  +FI +  SLS +      RL+
Sbjct: 255 KQIIGVLDNPIQVYTVLAVLFIAVNYSLSKLAQAVQQRLS 294


>gi|28900494|ref|NP_800149.1| arginine transporter permease subunit ArtM [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153837563|ref|ZP_01990230.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus
           AQ3810]
 gi|260365647|ref|ZP_05778168.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus K5030]
 gi|260877447|ref|ZP_05889802.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AN-5034]
 gi|260898928|ref|ZP_05907369.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus Peru-466]
 gi|260901238|ref|ZP_05909633.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AQ4037]
 gi|28808874|dbj|BAC61982.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149749060|gb|EDM59871.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus
           AQ3810]
 gi|308089208|gb|EFO38903.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus Peru-466]
 gi|308090586|gb|EFO40281.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AN-5034]
 gi|308106820|gb|EFO44360.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AQ4037]
 gi|308111460|gb|EFO49000.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus K5030]
          Length = 222

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF+ +  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDAVRESVLWTWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKSATLRVLLPYAIRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YLS++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLMVFGVAGAFYLSVNGILTLIFRQVEKK 215


>gi|330965545|gb|EGH65805.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 215

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMDISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  I P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAIAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|325121843|gb|ADY81366.1| polar amino acid transport system permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 211

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 34/202 (16%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 26  VGVICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFACG 81

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 82  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLQPIQ 121

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---- 365
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E    
Sbjct: 122 IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 181

Query: 366 IILIWMFIYLSLSIMIALFMNR 387
           +I+ ++ I L +SI+ +   +R
Sbjct: 182 LIMAYLIILLPVSILTSYLEHR 203


>gi|269964164|ref|ZP_06178461.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269831119|gb|EEZ85281.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 222

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF+ +  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDAVRESVLWTWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKTATLKVLLPYAIRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|212213033|ref|YP_002303969.1| arginine transport system permease protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011443|gb|ACJ18824.1| arginine transport system permease protein [Coxiella burnetii
           CbuG_Q212]
          Length = 221

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 4/153 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T  I GLP L+++   + ++F    L    F     VS  F +  +AL    AA+  + +
Sbjct: 55  TAFIRGLPELLVL---FAIYFGGSALLTKLFHRSVQVS-AFSAGVLALGMIFAAYAVQTL 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L+A+P+GQ EA  A+GL      + ++LPQA    +P L + +L LLK+S+L   +G
Sbjct: 111 RGALLAIPKGQTEAGKAMGLPGWIIFKRIVLPQAWHHALPGLGNLWLVLLKDSALVALIG 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             DL++      + T +  +  ++  F++L L+
Sbjct: 171 LGDLMNKAQLAASTTREPFKFYVMAAFLFLLLT 203


>gi|163733599|ref|ZP_02141042.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           litoralis Och 149]
 gi|161393387|gb|EDQ17713.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           litoralis Och 149]
          Length = 270

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 28/189 (14%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPL-----LYISTFLIF 230
           +FPTL       + +F++ + ++L L  A  L+R    +     PL     +Y+  F   
Sbjct: 57  TFPTLLQAFMIDVMIFAWSVPLILGLGLAIALARG--ARAPALFPLRIFGAVYVDVFR-- 112

Query: 231 GLPTLVLIALKYQLHFDKPVLG---QFN--FIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P ++ I   Y + F  P LG    +N  +I G+          +AL    +A++AE++
Sbjct: 113 GVPVILTI---YLIGFGIPGLGLPRPWNSPYIWGT----------VALVLTYSAYVAEVL 159

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V   Q  AAI LGL+ R   R V+LPQA+R ++P   +  + L K+ +L   +G
Sbjct: 160 RSGIESVHASQRNAAICLGLSERDTMRYVVLPQAIRRVVPANMNMLVALQKDVALLSFIG 219

Query: 346 FADLVSVGG 354
             +++   G
Sbjct: 220 PVEILRQAG 228


>gi|148379377|ref|YP_001253918.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933606|ref|YP_001383753.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153935113|ref|YP_001387303.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. Hall]
 gi|148288861|emb|CAL82945.1| putative ABC transporter, membrane protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152929650|gb|ABS35150.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152931027|gb|ABS36526.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. Hall]
          Length = 221

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 58/85 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGT 355
           +++++K S+LA  +G  ++++V  +
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQS 180


>gi|317487127|ref|ZP_07945930.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316921611|gb|EFV42894.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 328

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 1/103 (0%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF+ E  R+G+ +V RG +EAA +LGL   +  R V+LP A+R ++PPLT   + LLK +
Sbjct: 207 AFMIEYFRAGIESVSRGHVEAARSLGLGVIQTMRFVILPLAIRVVLPPLTGHLVGLLKAT 266

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIW-MFIYLSLSIM 380
           +    VG  +L+     I+        ++ I  M++ L L +M
Sbjct: 267 AFVSVVGMPELLKRAMEIVEWKANPTPLVTITIMYLILLLPLM 309


>gi|304398230|ref|ZP_07380104.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304354096|gb|EFM18469.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 229

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 22/206 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYI---STFLIFGLPTLVLI-----ALKYQL 244
           S VL ++L L           K  ++ PL  I    T LI G+P LVL+      L+  L
Sbjct: 23  SVVLAVLLGLIGA------GAKLSRSRPLAMIFEGYTTLIRGVPDLVLMLLIFYGLQIVL 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +     LG   F     + P    + I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 77  NQVTDALGMAQF----DIDPMVAGI-ITLGFIYGAYFTETFRGAFMAVPQGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTSAQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYL---SLSIMIALFMNR 387
              ++   IYL   +LS  +  ++NR
Sbjct: 192 YFAIVAGVIYLVFTTLSNGVLWWLNR 217


>gi|260575386|ref|ZP_05843385.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022306|gb|EEW25603.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 256

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)

Query: 253 QFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           QF +I  S++ P     +    +AL+   A +  E++R     V RGQ+EAA A+G+   
Sbjct: 108 QFPWIKDSSLWPYLRQAWPYAVLALTLSFAGYEGEVMRGAFKGVQRGQLEAARAMGMPRL 167

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R + LPQA+   +P L  + +  LK + L   +   D+ SV   +   T    E +L
Sbjct: 168 TILRRIWLPQALHRALPTLGGEVVLQLKATPLVATITVVDIYSVASRVRQDTFIVYEPLL 227

Query: 369 IWMFIYLSLSIMIAL----FMNRLNAKIA 393
           +   +Y++++ ++ L      +R+ A++A
Sbjct: 228 LLAVVYMAITGLLVLAFRWLEHRVPARVA 256


>gi|221195848|ref|ZP_03568901.1| ABC transporter, permease protein [Atopobium rimae ATCC 49626]
 gi|221184322|gb|EEE16716.1| ABC transporter, permease protein [Atopobium rimae ATCC 49626]
          Length = 224

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + AA + ++VR  L ++P  Q ++A  LGL+ R+    V+LPQA+R ++PP  +    ++
Sbjct: 100 WGAAEMGDLVRGALTSIPSSQYDSAFVLGLSRRQTFLRVVLPQAIRRLLPPAINLITRMI 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN------QTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           K ++L   +G  +L+ VG  I +       T  A+ I     F+Y +    ++L   RL 
Sbjct: 160 KTTALCNLIGVVELIRVGSQITDFYRFKFPTTGALWIYGAIFFLYFAACFPLSLLARRLE 219


>gi|84515092|ref|ZP_01002455.1| putative glutamine ABC transporter permease protein [Loktanella
           vestfoldensis SKA53]
 gi|84511251|gb|EAQ07705.1| putative glutamine ABC transporter permease protein [Loktanella
           vestfoldensis SKA53]
          Length = 296

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 47/73 (64%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI RSG+ AV  GQ  AA +LGL+  +  R  +LPQA+R+++P L +  + L K+
Sbjct: 174 AAYVAEIYRSGIDAVHEGQRAAAKSLGLSEWQTLRYAILPQALRNVVPALMNIVVALQKD 233

Query: 338 SSLAVAVGFADLV 350
            +L   +G  D V
Sbjct: 234 VALLSVIGVRDAV 246


>gi|296394030|ref|YP_003658914.1| polar amino acid ABC transporter inner membrane protein
           [Segniliparus rotundus DSM 44985]
 gi|296181177|gb|ADG98083.1| polar amino acid ABC transporter, inner membrane subunit
           [Segniliparus rotundus DSM 44985]
          Length = 279

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 21/134 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +   L FG P L L  L  +  F           G +           AL   
Sbjct: 119 RGLPVLLVIFLLGFGAPALRLKGLPKEAVF----------WGAA-----------ALVLT 157

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE++R+G+ +VPR Q  AA ALGL      R V+LPQA+R++ P L +  ++L K
Sbjct: 158 YSAYVAEVLRAGIESVPRTQRLAARALGLRAGATMRFVVLPQAVRAVSPALLNDLVSLQK 217

Query: 337 NSSLAVAVGFADLV 350
           +S L   +G  D +
Sbjct: 218 DSGLIAVLGVVDAI 231


>gi|293395144|ref|ZP_06639430.1| histidine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291422321|gb|EFE95564.1| histidine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 235

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 3/122 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+RS +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAANAYGFSRFKMYRCIILPSALRSALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALFMNRLN 389
            + +L +++LA      DL+ V   I   T Q      I   +YL++S  +I+LF  RL 
Sbjct: 167 VILMLHSTALAFTATVPDLLKVARDINAATYQPFYAFGIAAVLYLAISYALISLF--RLA 224

Query: 390 AK 391
            K
Sbjct: 225 EK 226


>gi|271501283|ref|YP_003334308.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344838|gb|ACZ77603.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 238

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA  V   DL+ V   I   T Q      I   +YL++S ++IALF
Sbjct: 167 VILMLHSTALAFTVTVPDLLKVARDINAATYQPFYAFGIAGAMYLAISFVLIALF 221


>gi|239834736|ref|ZP_04683064.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822799|gb|EEQ94368.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 214

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L    +A +AEI R  L ++  GQ EAA AL    R     V+ PQA R  +P
Sbjct: 82  FVAALIGLGLIASANMAEIYRGALASLHHGQWEAATALNFGTRYTLIDVVAPQAFRVALP 141

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              S  + L+K +++A  +G ADL   G  +   T + IE+  +    Y+ LS+ +A ++
Sbjct: 142 SAASYLIGLMKETAVASTIGVADLAFRGNQVSQLTFKGIEVFALVGLFYIFLSLPVA-WL 200

Query: 386 NR-----LNAKIA 393
           +R     L AK+A
Sbjct: 201 SRSADSYLRAKVA 213


>gi|188527761|ref|YP_001910448.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           Shi470]
 gi|188144001|gb|ACD48418.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           Shi470]
          Length = 240

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++F   +     +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 47  IISFILGLFIAVFVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 101

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 102 GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 154 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTVAEVFRIAQQKANASYDFLPI 213

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 214 YLEAALIYWLFCLVLEVIQKRVE 236


>gi|119383896|ref|YP_914952.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373663|gb|ABL69256.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 219

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 68/126 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++  ++ FI EI+R GL  +  G +EAAIALG+  R     V+LPQ    I+PPL ++
Sbjct: 93  LAIALNSSIFITEIMRGGLSGMDPGPVEAAIALGVRARTIWTRVILPQLYIRILPPLVNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              ++K ++L   +   +++     I N T + +E +L    +  +L++ I+    R+  
Sbjct: 153 LTTIVKGTALLSVITVVEVLRTAQQIANTTFRPLEALLAAAIVLFALNLAISQLGRRIET 212

Query: 391 KIALKE 396
           + A + 
Sbjct: 213 RFAARR 218


>gi|22126708|ref|NP_670131.1| arginine transporter permease subunit ArtQ [Yersinia pestis KIM 10]
 gi|45441073|ref|NP_992612.1| arginine transporter permease subunit ArtQ [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595716|ref|YP_069907.1| arginine transporter permease subunit ArtQ [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806634|ref|YP_650550.1| arginine transporter permease subunit ArtQ [Yersinia pestis
           Antiqua]
 gi|149366607|ref|ZP_01888641.1| arginine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|153950650|ref|YP_001401592.1| arginine ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162420520|ref|YP_001606087.1| arginine transporter permease ArtQ [Yersinia pestis Angola]
 gi|165924421|ref|ZP_02220253.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938991|ref|ZP_02227544.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009770|ref|ZP_02230668.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211449|ref|ZP_02237484.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399948|ref|ZP_02305466.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419783|ref|ZP_02311536.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424066|ref|ZP_02315819.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|170024937|ref|YP_001721442.1| arginine transporter permease subunit ArtQ [Yersinia
           pseudotuberculosis YPIII]
 gi|186894792|ref|YP_001871904.1| arginine transporter permease subunit ArtQ [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928498|ref|YP_002346373.1| arginine transporter permease subunit ArtQ [Yersinia pestis CO92]
 gi|229841312|ref|ZP_04461471.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843415|ref|ZP_04463561.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229895788|ref|ZP_04510958.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Pestoides A]
 gi|270487001|ref|ZP_06204075.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294503342|ref|YP_003567404.1| arginine transport system permease protein [Yersinia pestis
           Z176003]
 gi|21959727|gb|AAM86382.1|AE013886_7 arginine 3rd transport system permease protein [Yersinia pestis KIM
           10]
 gi|45435932|gb|AAS61489.1| arginine transport system permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588998|emb|CAH20616.1| ABC arginine transporter, permease subunit artQ [Yersinia
           pseudotuberculosis IP 32953]
 gi|108778547|gb|ABG12605.1| arginine transport system permease protein [Yersinia pestis
           Antiqua]
 gi|115347109|emb|CAL20002.1| arginine transport system permease protein [Yersinia pestis CO92]
 gi|149290981|gb|EDM41056.1| arginine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|152962145|gb|ABS49606.1| arginine ABC transporter, permease protein ArtQ [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353335|gb|ABX87283.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           Angola]
 gi|165913138|gb|EDR31762.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923481|gb|EDR40613.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991166|gb|EDR43467.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207220|gb|EDR51700.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962524|gb|EDR58545.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050656|gb|EDR62064.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056915|gb|EDR66678.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751471|gb|ACA68989.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697818|gb|ACC88447.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229689762|gb|EEO81823.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229697678|gb|EEO87725.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700711|gb|EEO88740.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Pestoides A]
 gi|262361382|gb|ACY58103.1| arginine transport system permease protein [Yersinia pestis
           D106004]
 gi|262365081|gb|ACY61638.1| arginine transport system permease protein [Yersinia pestis
           D182038]
 gi|270335505|gb|EFA46282.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294353801|gb|ADE64142.1| arginine transport system permease protein [Yersinia pestis
           Z176003]
 gi|320015799|gb|ADV99370.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 238

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 10/169 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLH-FDKPV-LGQFNFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+++        L+ F+ P+ L   NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGSSQLLMMLSDGFTLNLYLFELPIKLNLDNF----EVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +A+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+
Sbjct: 110 ALALLYSAYASQTLRGALKAVPIGQWESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAAAIYLVVTLL 218


>gi|327193431|gb|EGE60330.1| octopine ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 241

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 16/221 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T+  +   F+   ++G V++    +LSRH    T + L   Y  T ++ G+P L
Sbjct: 23  LTAAAMTIGVSVCGFLTGTLIGTVITFM--QLSRHL---TIRWLADCY--TTVLRGVPDL 75

Query: 236 VLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           ++I L Y      L     + G   FIG     P F++  +AL   +AA+ AE+ R    
Sbjct: 76  LVIYLFYFGGSALLGSLGGLFGYQGFIG----MPAFLTGTLALGVVSAAYQAEVFRGAYR 131

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RG++EAA A+G+      R ++ P  +R  IP L + +  +LK S+L    G  +L+
Sbjct: 132 SVARGEIEAASAVGMRPWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALISVTGLVELL 191

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                    T +  E  L  + +YL ++ + ++   R+ A+
Sbjct: 192 RQSQIAAGSTRRPFEFYLTAVVLYLVITWLSSILFRRMEAR 232



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 13/73 (17%)

Query: 90  LVGFVNTFW-------------LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           LVGF  T W             ++  G +  T+IGT++   +LS +  + W+   Y  V 
Sbjct: 10  LVGFEQTGWGWLLLTAAAMTIGVSVCGFLTGTLIGTVITFMQLSRHLTIRWLADCYTTVL 69

Query: 137 RNIPPLVVIFFLY 149
           R +P L+VI+  Y
Sbjct: 70  RGVPDLLVIYLFY 82


>gi|237667355|ref|ZP_04527339.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237655703|gb|EEP53259.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 254

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 66/120 (55%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AE VR G+ ++  GQ E A A+G+TH +    V+LPQ +R+I+P + +  +
Sbjct: 117 VSINTGAYMAETVRGGIESIDMGQTEGAKAIGMTHFQTMLYVILPQTLRNIMPQIGNNLI 176

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  VG +      +   +  I   IY  ++ +++  +  +  K+
Sbjct: 177 INIKDTSVLNVISVSELYFVGKSAAGVYYKYFPVFFIICVIYFVMNFVVSRILRLIEKKM 236


>gi|153954684|ref|YP_001395449.1| hypothetical protein CKL_2066 [Clostridium kluyveri DSM 555]
 gi|219855153|ref|YP_002472275.1| hypothetical protein CKR_1810 [Clostridium kluyveri NBRC 12016]
 gi|146347542|gb|EDK34078.1| Hypothetical protein CKL_2066 [Clostridium kluyveri DSM 555]
 gi|219568877|dbj|BAH06861.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 236

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 20/210 (9%)

Query: 177 SFP-TLTMDTNAKIFVFSFVLGIVLSLFATR----LSR--HFHEKTGKALPLLYISTFLI 229
            FP TL M   A I   + V+G++ S+   +    LS+  HF     K +P+L I   L 
Sbjct: 18  KFPITLYMAVTATIL--ALVVGLIFSVIVKKNIFLLSKVIHFINSFLKGIPVLVILYILY 75

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           + +PT +L++L   L F   +             P+ M    A       ++ +++ S  
Sbjct: 76  YSMPT-ILVSLGDSLGFKYDIKN----------PPKLMFGIFAFGITYIPYMCDMIISAY 124

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             +PRGQ EA  ++G T  +  + +++PQ +   +P   + ++N+LK +SLA  V   ++
Sbjct: 125 DTIPRGQTEACDSIGFTTFQTMQKIIIPQMVVVCVPIFGNHFVNILKATSLAYMVSIIEM 184

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +         T + +E  ++   IY  + I
Sbjct: 185 MGAAKNYATGTQRFMETYIVAALIYWIICI 214


>gi|184155645|ref|YP_001843985.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|183226989|dbj|BAG27505.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
          Length = 229

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AAFIAE  RS  + V  GQ EAA +LGL +      V+LPQA R  +P L +  L+L K 
Sbjct: 106 AAFIAEYYRSAFLGVDEGQFEAARSLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKG 165

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SLA  +  +++      +       + I ++   IY  +  +++   + L   +A   K
Sbjct: 166 TSLAAMITVSEMFMEAKVVAGAAQDYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLATWSK 225

Query: 398 K 398
           +
Sbjct: 226 E 226



 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           A ++G L+   R S+++ ++W  R Y+   R IP LV++F  Y
Sbjct: 44  ANVLGILIMLMRTSSHRFLSWPARFYISFLRGIPMLVILFITY 86


>gi|153941265|ref|YP_001390764.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|152937161|gb|ABS42659.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|295318836|gb|ADF99213.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 221

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 58/85 (68%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGT 355
           +++++K S+LA  +G  ++++V  +
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQS 180


>gi|138895921|ref|YP_001126374.1| amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248812|ref|ZP_03147512.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Geobacillus sp. G11MC16]
 gi|134267434|gb|ABO67629.1| Amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211688|gb|EDY06447.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Geobacillus sp. G11MC16]
          Length = 237

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 94/218 (43%), Gaps = 15/218 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+      +  S VLGI+ +L        F       L         I   P LV +  
Sbjct: 21  LTLGLTLACYAVSLVLGIIWTLLRRAPWAWFRWTVNGVLEF-------IRSTPPLVQL-- 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L +  P++       G T+SP   +  I L  + + + +E+ RSG+ AV +GQ EAA
Sbjct: 72  -YFLFYAWPLVPHV----GVTLSP-IAAAIIGLGVHYSTYTSEVYRSGIDAVDKGQWEAA 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +AL  +  +    V+LPQA+  IIP L +  + + K      ++G   ++        Q 
Sbjct: 126 LALNFSRARTWTKVILPQAIPPIIPMLGNYLIIMFKEIPTTASIGVMGMMLTAKMYGAQH 185

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +E   I  F +L LS   +LF+  L  K+  +  K
Sbjct: 186 WVYLEPFTIVAFFFLLLSYPSSLFVQWLEKKMNRRFDK 223


>gi|49081808|gb|AAT50304.1| PA2924 [synthetic construct]
          Length = 230

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 272 ALSCYTAAFI-----AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           A  C T AFI      E  R    AVP GQ+EAA A G+   +  R VLLPQ +R  +P 
Sbjct: 95  AAGCVTLAFIYGAYFTETFRGAFQAVPAGQVEAAQAYGMGRWRVFRRVLLPQMLRYALPG 154

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + + +  L+K+++L   +G  DLV         T Q     L+   IYL+++
Sbjct: 155 IGNNWQVLVKSTALVSIIGLGDLVKATQDAGKGTLQFFHFTLVCGLIYLAIT 206



 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   IL G + T  LA   ++ A +IG L  + +L+AN+ +  +   Y  + R++P L
Sbjct: 4   DGFGPQILAGTLVTLKLALGSLLGAVLIGLLGASAKLAANRPLRALASGYTTLIRSVPDL 63

Query: 143 VVIFFLYKSV 152
           V++  L+ S+
Sbjct: 64  VIMLLLFFSL 73


>gi|89091826|ref|ZP_01164781.1| hypothetical protein MED92_06661 [Oceanospirillum sp. MED92]
 gi|89083561|gb|EAR62778.1| hypothetical protein MED92_06661 [Oceanospirillum sp. MED92]
          Length = 221

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 5/108 (4%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +Q++     LG F    G  +SP +M++  AL    A ++AE  R G  ++P  Q  A+ 
Sbjct: 71  FQIYMAYFGLGAF----GIHLSP-YMAVLSALVFINAGYLAETFRGGFQSIPDAQYNASK 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +LG+T  +  R ++LPQ  R I  P+T+Q++  +  SSL + VG ++L
Sbjct: 126 SLGMTSFQTYRYIILPQMFRRIYHPMTNQFVWSILMSSLGILVGMSEL 173


>gi|327194083|gb|EGE60957.1| putative ArtM, ABC-type arginine/histidine transport system,
           permease component ArtM [Rhizobium etli CNPAF512]
          Length = 252

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 93/197 (47%), Gaps = 17/197 (8%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           VF F+L I L+L         R     +  + +  PLL     L +G+ +L+ +    + 
Sbjct: 52  VFGFILAIGLALAQVNGPVWLRGCAKAYCTSFRGTPLLIQLWLLYYGVGSLLPMIPGLRT 111

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P++ +  F    + +  +           AA+ AE++R  L+AVP+G++EA  A G
Sbjct: 112 SFLWPIVREGFFFAAVSFTLNY-----------AAYEAEVLRGALLAVPKGELEAGRAFG 160

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R + LP+A+R  +P +  + +  LK + LA  V   DL +V   +   T    
Sbjct: 161 MSRWTLLRRIWLPRAIRIALPTIGGEVVLQLKATPLAFTVTVMDLYAVAYKVRQDTLLVY 220

Query: 365 EIILIWMFIYLSLSIMI 381
           E ++I    Y+ L+++I
Sbjct: 221 EPLIIVTVFYVCLTLVI 237


>gi|170721101|ref|YP_001748789.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169759104|gb|ACA72420.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 221

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 73/133 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +  +A+     A+  EI+R+G+ A+P+GQ+EAA AL ++  +A R V+L  A+  + 
Sbjct: 89  EWQAAVLAMVINLGAYSTEIIRAGIQAIPKGQLEAAAALAMSRFEAFRHVVLQPALAKVW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P LTSQ + ++  S++   +   +L      I ++  +A E  L+   +YL ++I +   
Sbjct: 149 PALTSQIVIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYLLTTVLYLVMAIALRQL 208

Query: 385 MNRLNAKIALKEK 397
           +  L  ++ +  +
Sbjct: 209 LAWLGQRLLMGRR 221


>gi|193077066|gb|ABO11824.2| ABC-type amino acid transport system [Acinetobacter baumannii ATCC
           17978]
          Length = 231

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 31/200 (15%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 34  VGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFACG 89

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 90  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLKPTQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E + +
Sbjct: 130 IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 189

Query: 370 WMFIYLSLSIMIALFMNRLN 389
            +  YL + ++  ++ N+L+
Sbjct: 190 LIMAYL-IILLTRVYFNQLS 208


>gi|227514871|ref|ZP_03944920.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227086718|gb|EEI22030.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 237

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AAFIAE  RS  + V  GQ EAA +LGL +      V+LPQA R  +P L +  L+L K 
Sbjct: 114 AAFIAEYYRSAFLGVDEGQFEAARSLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKG 173

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SLA  +  +++      +       + I ++   IY  +  +++   + L   +A   K
Sbjct: 174 TSLAAMITVSEMFMEAKVVAGAAQDYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLATWSK 233

Query: 398 K 398
           +
Sbjct: 234 E 234



 Score = 36.2 bits (82), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 26/43 (60%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           A ++G L+   R S+++ ++W  R Y+   R IP LV++F  Y
Sbjct: 52  ANVLGILIMLMRTSSHRFLSWPARFYISFLRGIPMLVILFITY 94


>gi|187923549|ref|YP_001895191.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714743|gb|ACD15967.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 229

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI  +P LVL+ L  Y +        D   L QF+      + P F++  + L     
Sbjct: 54  TTLIRSVPDLVLMLLLFYSIQIAVNNLTDALNLPQFD------IDP-FVAGVLTLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K +
Sbjct: 107 AYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIGNNWQVLVKAT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +G AD+V         T      IL+   IYL+++
Sbjct: 167 ALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAIT 206


>gi|83593588|ref|YP_427340.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83576502|gb|ABC23053.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 239

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 4/195 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +    K+   +  +G+ +++  T L R       +A P  +I  F   G P L+ IAL Y
Sbjct: 18  LPVTLKLVTLAVAIGVFIAI-PTALLRVHPSPLVRAFPYAFI--FFFRGTPLLIQIALVY 74

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P + + N +    +   F    IA +  T A+ AEI+R  + A+PRG++EAA A
Sbjct: 75  YGLSTLPWIRE-NEVLWPILREPFWCALIAFALNTGAYSAEILRGAIQAIPRGEVEAARA 133

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G+      R ++LP+A +  +P   ++ + +LK S+LA ++   D+  V   +  +   
Sbjct: 134 YGMRGLLIVRRIILPRAFQIGLPAYGNEIILILKGSALASSITLLDITGVARLLYARYYT 193

Query: 363 AIEIILIWMFIYLSL 377
            +E  +    IYL L
Sbjct: 194 PVEAFVTAGVIYLIL 208


>gi|222106917|ref|YP_002547708.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221738096|gb|ACM38992.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 222

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQ 243
           T   I+V   VLGIV+        R+     G+ L + L +   ++ G P L+ I L Y 
Sbjct: 21  TTLWIWVVGMVLGIVVGFLVATGRRY----GGRFLDIPLGLVVEVLRGTPFLIQIFLVY- 75

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P +G        ++ P    L I L+ Y+AA+ +EI R+G  +VP G +EAA  L
Sbjct: 76  --YGGPYVGL-------SLDPIPCGL-IGLTVYSAAYYSEIFRAGYGSVPHGHVEAAECL 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R +LLP+    ++PP  +  + LLK S++   +   +L +    I +     
Sbjct: 126 GLTRLQIIRRILLPEMALIVLPPCVNLAIILLKESAVLSIITVPELTATVSAIGSAQYAF 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +E I +   IY  +    A    +  A+++
Sbjct: 186 LEAIFVLAVIYWVIVEATAWAARKTEARLS 215



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T W+   GM+   ++G LV  GR    + +     + VEV R  P L+ IF +
Sbjct: 15  IFSGATTTLWIWVVGMVLGIVVGFLVATGRRYGGRFLDIPLGLVVEVLRGTPFLIQIFLV 74

Query: 149 YKS----VLSVLPIP 159
           Y       LS+ PIP
Sbjct: 75  YYGGPYVGLSLDPIP 89


>gi|328470444|gb|EGF41355.1| arginine transporter permease subunit ArtM [Vibrio parahaemolyticus
           10329]
          Length = 222

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF+ +  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDAVRESVLWTWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKSATLRVLLPYAIRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YLS++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLMVFGVAGAFYLSVNGILTLIFRQVEKK 215


>gi|317494654|ref|ZP_07953066.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917256|gb|EFV38603.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 244

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 77/129 (59%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+   ++++A  + +G+ AV RGQ +A ++LGL   +    V+LPQA+R +
Sbjct: 94  PEITTVVCALALIASSYLAHAIAAGIHAVGRGQWQAGLSLGLNRWQVLGNVVLPQALRMM 153

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q+++L+K++SLA  VG ++L  +   + N++    +E+ +    +Y  + + + 
Sbjct: 154 VPSFINQWISLIKDTSLAYIVGVSELTFLATQVNNRSMVYPMEVFMFVAGVYFVMCLALD 213

Query: 383 LFMNRLNAK 391
           L  N L+ +
Sbjct: 214 LAANHLSRR 222


>gi|303250562|ref|ZP_07336759.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307252993|ref|ZP_07534880.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650550|gb|EFL80709.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859522|gb|EFM91548.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 223

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       ++LPQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLRIILPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|289674515|ref|ZP_06495405.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
 gi|302186818|ref|ZP_07263491.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|330900040|gb|EGH31459.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330977257|gb|EGH77213.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 215

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 3/105 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +T+A++AEI R  + ++ +GQ EA+ +L LT  +  R V+LPQA+R  + P     + ++
Sbjct: 95  FTSAYLAEIWRGCVESISKGQWEASASLALTPFEQMRYVILPQALRIAVAPTVGFSVQVV 154

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           K +++   +GF +L   G  + N T    E  +++ F+ L   I+
Sbjct: 155 KGTAVTSIIGFTELTKTGSMLANAT---FEPFMVYGFVALGYFIL 196


>gi|66043566|ref|YP_233407.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254273|gb|AAY35369.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330971846|gb|EGH71912.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 215

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 3/105 (2%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +T+A++AEI R  + ++ +GQ EA+ +L LT  +  R V+LPQA+R  + P     + ++
Sbjct: 95  FTSAYLAEIWRGCVESISKGQWEASASLALTPFEQMRYVILPQALRIAVAPTVGFSVQVV 154

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           K +++   +GF +L   G  + N T    E  +++ F+ L   I+
Sbjct: 155 KGTAVTSIIGFTELTKTGSMLANAT---FEPFMVYGFVALGYFIL 196


>gi|86146433|ref|ZP_01064756.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218709051|ref|YP_002416672.1| histidine transport system permease HisM [Vibrio splendidus LGP32]
 gi|85835696|gb|EAQ53831.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218322070|emb|CAV18142.1| Histidine transport system permease protein hisM [Vibrio splendidus
           LGP32]
          Length = 225

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 63/109 (57%), Gaps = 1/109 (0%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++  K  R ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSTPKTYRRIILPSALRRALPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            S++A  V   DL      + ++     E  L     Y++L+ I+IA+F
Sbjct: 162 GSAVAGIVTIMDLTGAARLVNSRYYAPFESFLTAGLFYMALTFIIIAIF 210


>gi|145299600|ref|YP_001142441.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142852372|gb|ABO90693.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 230

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 4/144 (2%)

Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            Q+ ++  S     F   +    +A +  T A+ AEIVR  ++ +P+GQ+EAA A G++ 
Sbjct: 77  AQWEWLKNSAAWTLFAEAWFCALLAFTLNTGAYTAEIVRGAVLNMPKGQIEAANAFGMSR 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    ++LP + R  +P  +++ + +L+ S++A  +   DL      I ++     E  
Sbjct: 137 WQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARIINSRYYSPFEAF 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           L    +Y+ L+ +I     +  A+
Sbjct: 197 LTAGLLYMLLTFVIVWLFKKWEAR 220


>gi|56697874|ref|YP_168245.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56679611|gb|AAV96277.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 259

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+LS +  AF  EI R+G+ AVP    EA  ALG++  +    V+ P A+R  IP L + 
Sbjct: 130 ISLSFFAGAFNVEIFRAGIEAVPHSTREAEEALGMSRTQTFTNVVFPLALRVSIPALNNN 189

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-IYLSLSIMIALFMNRLN 389
            +NL+K ++ A A+   +L+    +I N    A    ++ +F +YL L  ++   MN   
Sbjct: 190 LVNLVKTTTQAFAIAVPELLYESVSIWNDFPSAQNPTMLLLFVVYLGLVGVLVFGMNSWE 249

Query: 390 AKI 392
            K+
Sbjct: 250 RKM 252


>gi|15598120|ref|NP_251614.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           PAO1]
 gi|107102473|ref|ZP_01366391.1| hypothetical protein PaerPA_01003535 [Pseudomonas aeruginosa PACS2]
 gi|218890877|ref|YP_002439743.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           LESB58]
 gi|254235905|ref|ZP_04929228.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           C3719]
 gi|254241588|ref|ZP_04934910.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           2192]
 gi|313108081|ref|ZP_07794240.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           39016]
 gi|9949018|gb|AAG06312.1|AE004718_9 histidine transport system permease HisQ [Pseudomonas aeruginosa
           PAO1]
 gi|126167836|gb|EAZ53347.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           C3719]
 gi|126194966|gb|EAZ59029.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           2192]
 gi|218771102|emb|CAW26867.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           LESB58]
 gi|310880742|gb|EFQ39336.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           39016]
          Length = 229

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 272 ALSCYTAAFI-----AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           A  C T AFI      E  R    AVP GQ+EAA A G+   +  R VLLPQ +R  +P 
Sbjct: 95  AAGCVTLAFIYGAYFTETFRGAFQAVPAGQVEAAQAYGMGRWRVFRRVLLPQMLRYALPG 154

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + + +  L+K+++L   +G  DLV         T Q     L+   IYL+++
Sbjct: 155 IGNNWQVLVKSTALVSIIGLGDLVKATQDAGKGTLQFFHFTLVCGLIYLAIT 206



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   IL G + T  LA   ++ A +IG L  + +L+AN+ +  +   Y  + R++P L
Sbjct: 4   DGFGPQILAGTLVTLKLALGSLLGAVLIGLLGASAKLAANRPLRALASGYTTLIRSVPDL 63

Query: 143 VVIFFLYKSV 152
           V++  L+ S+
Sbjct: 64  VIMLLLFFSL 73


>gi|330957138|gb|EGH57398.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 221

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 83/154 (53%), Gaps = 5/154 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P   + A+  +L  + P L Q  F F G  ++     E+ +  +A+     A+  EIVR+
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVVNLGAYSTEIVRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +   
Sbjct: 112 GIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 172 ELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|297194202|ref|ZP_06911600.1| amino acid ABC transporter transmembrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722543|gb|EDY66451.1| amino acid ABC transporter transmembrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 216

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 50/81 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+  + + + A++ R+G+ AVP GQ EAA AL L   +    V+LPQA+R I P L + 
Sbjct: 93  IAIGLHYSTYTAQVYRAGIEAVPPGQWEAATALSLPAHRTWIAVILPQAVRRITPALGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + +LK++ L  A+G  +++ 
Sbjct: 153 VIAMLKDTPLLAAIGVLEMLQ 173


>gi|308187618|ref|YP_003931749.1| Histidine transport system permease protein [Pantoea vagans C9-1]
 gi|308058128|gb|ADO10300.1| Histidine transport system permease protein [Pantoea vagans C9-1]
          Length = 229

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+     LG   F     + P    + I L     A+
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIVLNQVTDALGMAQF----DIDPMVAGI-ITLGFIYGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVP+GQ+EAA A G T  +  R +L P  MR  +P + + +  +LK ++L
Sbjct: 108 FTETFRGAFMAVPKGQIEAATAFGFTGAQVFRRILFPAMMRYALPGIGNNWQVILKATAL 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
              +G  D+V         T Q     ++   IYL   +LS  +  ++NR
Sbjct: 168 VSLLGLEDVVKATQLAGKSTWQPFYFAIVAGVIYLVFTTLSNGVLWWLNR 217


>gi|261867468|ref|YP_003255390.1| arginine transporter permease subunit ArtQ [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412800|gb|ACX82171.1| histidine transport system permease protein HisQ [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 220

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 31/218 (14%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           V S VLG++L  LFA   +  F    GK + +      L+ GLP ++++ L Y       
Sbjct: 21  VCSLVLGLILGMLFAVLEANRF---VGKPMAVF---VALLRGLPEILVVLLVY------- 67

Query: 250 VLGQFNFIGGSTVSPEFMSLYI----------ALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                   G S V       YI          ALS   AA+ ++ +R  + A+ +GQ E+
Sbjct: 68  -------FGSSEVVEMITGDYIEFGAFGCGVFALSLIFAAYASQTLRGAIQAIAKGQWES 120

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   
Sbjct: 121 GAALGLSKGYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTN 180

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T Q      I   IYL ++++  + + +L  +    E+
Sbjct: 181 THQPFTWYGIAALIYLLVTLVSQVGIRKLELRFTRFER 218


>gi|257482805|ref|ZP_05636846.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|331012328|gb|EGH92384.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 229

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    + P  ++    L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGVAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|119898555|ref|YP_933768.1| amino acid ABC transporter permease [Azoarcus sp. BH72]
 gi|119670968|emb|CAL94881.1| amino acid ABC transporter, permease protein [Azoarcus sp. BH72]
          Length = 222

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +  +A+     A+  EI+R+G+ A PRGQ+EAA +L LT  +  R V+L  A+  + 
Sbjct: 89  EWQAAVLAMVINLGAYSTEIIRAGIQATPRGQIEAAESLALTRSQIFRHVVLRPALAKVW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P LTSQ + ++  S++   +   +L      I ++  +A E   +   IY +++++I
Sbjct: 149 PALTSQVIIVMLGSAVCSQIATEELTFAANFIQSRNFRAFETYFVTTAIYFAMALLI 205


>gi|238759068|ref|ZP_04620238.1| Histidine transport system permease protein hisQ [Yersinia aldovae
           ATCC 35236]
 gi|238702745|gb|EEP95292.1| Histidine transport system permease protein hisQ [Yersinia aldovae
           ATCC 35236]
          Length = 228

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 2/126 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +F       + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQITLNSITEFFGFAQINIDPLSAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVPRGQ+EAAIA G T  +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAYMAVPRGQIEAAIAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSIL 171

Query: 345 GFADLV 350
           G  D+V
Sbjct: 172 GLNDVV 177



 Score = 40.0 bits (92), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 14/116 (12%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA S ++ + +IG +   G+LS+N+L++ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALSSVLLSVVIGLMGAGGKLSSNRLLSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT-NAKIFVFSFVLG 197
           V++  ++      L I  +SI   FG         F  + +D  +A I    F+ G
Sbjct: 63  VLMLLIFYG----LQITLNSITEFFG---------FAQINIDPLSAGIITLGFIYG 105


>gi|269120727|ref|YP_003308904.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614605|gb|ACZ08973.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 215

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 7/117 (5%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ EI+RSGL ++ +GQ EAA  LG ++ K    +LLPQA+R ++P L ++ + L+K+
Sbjct: 98  TAYLIEIIRSGLESIDKGQDEAAKVLGYSYFKKIWYILLPQAIRRVLPSLGNEAITLVKD 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNRLNAK 391
           ++L   +   +++     I ++      II  + +   IYL LS +I      +  +
Sbjct: 158 TALIYIISLTEILKTTKEIASRYS----IITPYFYAGLIYLGLSFLIDRIFKNMEKR 210


>gi|116050926|ref|YP_790250.1| histidine transport system permease protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296388587|ref|ZP_06878062.1| histidine transport system permease protein [Pseudomonas aeruginosa
           PAb1]
 gi|115586147|gb|ABJ12162.1| histidine transport system permease protein [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 229

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 272 ALSCYTAAFI-----AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           A  C T AFI      E  R    AVP GQ+EAA A G+   +  R VLLPQ +R  +P 
Sbjct: 95  AAGCVTLAFIYGAYFTETFRGAFQAVPAGQVEAAQAYGMGRWRVFRRVLLPQMLRYALPG 154

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + + +  L+K+++L   +G  DLV         T Q     L+   IYL+++
Sbjct: 155 IGNNWQVLVKSTALVSIIGLGDLVKATQDAGKGTLQFFHFTLVCGLIYLAIT 206



 Score = 37.0 bits (84), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   IL G + T  LA   ++ A +IG L  + +L+AN+ +  +   Y  + R++P L
Sbjct: 4   DGFGPQILAGTLVTLKLALGSLLGAVLIGLLGASAKLAANRPLRALASGYTTLIRSVPDL 63

Query: 143 VVIFFLYKSV 152
           V++  L+ S+
Sbjct: 64  VIMLLLFFSL 73


>gi|296162373|ref|ZP_06845166.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. Ch1-1]
 gi|295887406|gb|EFG67231.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. Ch1-1]
          Length = 220

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 28/224 (12%)

Query: 182 TMDTNAKIFVFS----FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---------- 227
           T+D N   F +S     + G  L++FAT          G AL +L ++ F          
Sbjct: 3   TLDWNWT-FAWSILPALLTGFQLTVFATCFGAIIAFVVGLALTMLRMTRFAWLTFSANAF 61

Query: 228 --LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV +   Y L +  P  G          +  F++  I L  Y +A  +EI 
Sbjct: 62  VSFVRGTPLLVQL---YVLFYVLPKWGM--------SASAFVTGVIGLGVYYSASCSEIY 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  +  GQ EAA+ LGL  R+    ++LPQA+R+++P L +Q + + K +SL   + 
Sbjct: 111 RAGIEGIAPGQWEAALTLGLPIRRVWSGIVLPQALRTVLPMLGNQVVAMFKETSLMSTIT 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +L++    + +   + +E + +   +Y  +S   A  + RL 
Sbjct: 171 VMELLAQATNVGSIQYRYVEPLTLAGLLYFVVSYGSAKLIRRLE 214


>gi|193084368|gb|ACF10024.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote AD1000-18-D2]
          Length = 561

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 48/78 (61%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + + M + +    +   +IAE++R GL AV  GQ EAA+ALGL+  +    V LP A+R+
Sbjct: 417 AEDIMRMLLMFGIFGGCYIAEVLRGGLQAVDSGQKEAALALGLSPFQTKMTVELPNAVRT 476

Query: 323 IIPPLTSQYLNLLKNSSL 340
            +P + S ++ L K+++L
Sbjct: 477 TLPSIVSVFIGLWKDTTL 494


>gi|163857135|ref|YP_001631433.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii DSM 12804]
 gi|163260863|emb|CAP43165.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii]
          Length = 223

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 7/120 (5%)

Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
             P+L Q  F+       G+ +SP   +  +AL  + AA+ AE+ R+G+ +VPRGQ+EAA
Sbjct: 66  STPLLVQMYFLFYVLPQSGARMSP-LATGILALGVHYAAYCAEVYRAGIESVPRGQLEAA 124

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            AL ++  +    V+LPQA+  ++P L +  + + K++ L  A+   +L+     I + T
Sbjct: 125 TALNMSPWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKIIGSAT 184


>gi|170734710|ref|YP_001773824.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820748|gb|ACA95329.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 222

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 2/139 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+SP F ++ I  +    A++ EI R+G  +V + ++EAA  LG +  +  R V+ P 
Sbjct: 82  GVTLSP-FSAVLIGATFNAGAYLCEIQRAGFASVRQAEIEAAEVLGFSTAQIVRYVIFPH 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            ++ + PPL++Q++ +   +S+A   G  +L      + +QT  +IE   +   +Y++++
Sbjct: 141 VLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTFNLSSQTYLSIEAFSVAAVMYIAIT 200

Query: 379 IMIALFMNRLNAKIALKEK 397
            +IA F      + A + K
Sbjct: 201 -LIATFALAAFGRYACRAK 218


>gi|86360915|ref|YP_472802.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285017|gb|ABC94075.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 208

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 68/123 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  + A + AE+ R+G+  V RGQ EAA A  LT R+A   V+LPQA+  +IP L + 
Sbjct: 82  IGIGIHYATYTAEVYRAGIENVSRGQWEAAKATNLTTRQAWIHVILPQAIPPMIPALANY 141

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ + K + L  A+   +L++   +I N   + IE + +    +L +S++  + +  L  
Sbjct: 142 FIAMFKETPLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLVISLVSVVGLRWLEE 201

Query: 391 KIA 393
           + A
Sbjct: 202 RYA 204


>gi|228477197|ref|ZP_04061835.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|228251216|gb|EEK10387.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
          Length = 225

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 57/106 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I  + +  A + ++VR  + ++PR Q E+  ALGLT+ +    V++PQ +R ++P 
Sbjct: 93  LSAIIVFTLWGTAEMGDLVRGSITSLPRHQFESGRALGLTNGQLYTYVIIPQVLRRLLPQ 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 153 AINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198



 Score = 36.2 bits (82), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 37/61 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + ++GTL G    S +K+V ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISIVSVLLSLVLGTLFGIVMTSKSKIVRFLSRIYLEFIRIMPQLVLLFIV 77

Query: 149 Y 149
           Y
Sbjct: 78  Y 78


>gi|227873564|ref|ZP_03991806.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Oribacterium sinus F0268]
 gi|227840588|gb|EEJ50976.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Oribacterium sinus F0268]
          Length = 217

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 32/209 (15%)

Query: 191 VFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +FS ++G+  SL       F  R+ + + E + +  PLL    FL FGLP       K  
Sbjct: 29  LFSLLIGLAASLILYYKIPFWRRVVQVYVELS-RNTPLLVQLFFLYFGLP-------KLG 80

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F   + G                  I LS    A++ E  RSGL  V + Q E+A +L
Sbjct: 81  IRFSSELCG-----------------VIGLSFLGGAYMTEAFRSGLSTVQKIQKESAQSL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V+ PQA+   IP + +  + L+K +S+   +  ADL+ V   +I    + 
Sbjct: 124 GLSKGQIMRYVIFPQALSVSIPAIVANMIFLIKETSVFSGIALADLMYVSKDLIGLYYKT 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E +L+ +  YL + + +++  N L  ++
Sbjct: 184 EEALLMLVISYLIMLLPLSILGNVLERRM 212


>gi|71734611|ref|YP_272589.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257481839|ref|ZP_05635880.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289624458|ref|ZP_06457412.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289651581|ref|ZP_06482924.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|71555164|gb|AAZ34375.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320322171|gb|EFW78267.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320331822|gb|EFW87760.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330866608|gb|EGH01317.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330986784|gb|EGH84887.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009474|gb|EGH89530.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 221

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           P   + A+  +L  + P L Q  F F G    G  +S E+ +  +A+     A+  EI+R
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQIS-EWQAAVLAMVINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|300717676|ref|YP_003742479.1| lysine/arginine/ornithine ABC transporter, permease protein
           [Erwinia billingiae Eb661]
 gi|299063512|emb|CAX60632.1| lysine/arginine/ornithine ABC transporter, permease protein
           [Erwinia billingiae Eb661]
          Length = 238

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R +++P A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLN 389
            + +L +++LA      DL+ V   I + T Q      I   +YL +S ++I+LF  R  
Sbjct: 167 VILMLHSTALAFTATVPDLLKVARDINSATYQPFVAFGIAAVLYLMISYVLISLF--RKA 224

Query: 390 AKIALKEKK 398
            K  LK  K
Sbjct: 225 EKRWLKHVK 233


>gi|260663041|ref|ZP_05863934.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|260552662|gb|EEX25662.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 229

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AAFIAE  RS  + V  GQ EAA +LGL +      V+LPQA R  +P L +  L+L K 
Sbjct: 106 AAFIAEYYRSAFLGVDEGQFEAARSLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKG 165

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SLA  +  +++      +       + I ++   IY  +  +++   + L   +A   K
Sbjct: 166 TSLAAMITVSEMFMEAKVVAGAAQDYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLATWSK 225

Query: 398 K 398
           +
Sbjct: 226 E 226



 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 27/43 (62%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           A ++G L+   R+S+++ ++W  R Y+   R IP LV++F  Y
Sbjct: 44  ANVLGILIMLMRISSHRFLSWPARFYISFLRGIPMLVILFITY 86


>gi|149191817|ref|ZP_01870054.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148834335|gb|EDL51335.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 227

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 6/163 (3%)

Query: 225 STFLIFGLPTLVLI------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           ST  +F LP+   I       L  QL+     + QF  +  +     +    +A    T+
Sbjct: 44  STNYLFSLPSWGFIYFFRGTPLLVQLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTS 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+R  +  +P+G++EAA A G++  K  R ++LP A+R  +P  +++ + +L  S
Sbjct: 104 AYTAEIIRGAINGLPKGEVEAAKAYGMSPWKTYRRIILPSALRRALPAYSNEVIFMLHGS 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++A  V   DL      + ++     E  L     Y+ L+ +I
Sbjct: 164 AVAGIVTIMDLTGAARLVNSRYYAPFESFLTAGLFYMGLTFII 206


>gi|326803173|ref|YP_004320991.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651192|gb|AEA01375.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 233

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 71/133 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + + +A +   AA  +E +R  L AV + Q+EAA+++G+T +++ + ++ PQA+   
Sbjct: 99  PNILLIIVAFTLLEAAIESENIRGALNAVSKDQVEAALSIGMTKKQSLQRIIFPQALTVA 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP   + YL  +K  SLA  VG  D+++        +   +E  L    +Y  +  ++ +
Sbjct: 159 IPLFLNAYLKAIKIQSLAFTVGVVDILTQARFAAALSYHYLESYLTAALVYWLICGLLQV 218

Query: 384 FMNRLNAKIALKE 396
             + L+ KI+ ++
Sbjct: 219 VFDHLSQKISFEK 231


>gi|322832149|ref|YP_004212176.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167350|gb|ADW73049.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 238

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 1/137 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   +A+ ++ +R  L AVP+GQ E+   LG+        +++PQ  R
Sbjct: 101 VSP-FVCGVIALSLLYSAYASQTLRGALKAVPQGQWESGQVLGMKKSAIFFRLIMPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L++Q+L LLK+++L   +   DL+    +I  +T +     +I   IYL +++  
Sbjct: 160 HALPGLSNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAACIYLLVTLFS 219

Query: 382 ALFMNRLNAKIALKEKK 398
              + R+  +    E+ 
Sbjct: 220 QFVIKRIELRTTRFERS 236


>gi|110679457|ref|YP_682464.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109455573|gb|ABG31778.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 269

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 28/189 (14%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPL-----LYISTFLIF 230
           +FPTL       + +F++ + ++L L  A  L+R    +     PL     +Y+  F   
Sbjct: 56  TFPTLLQAFMIDVMIFAWSVPLILGLGLAIALARG--ARAPALFPLRIFGAVYVDVFR-- 111

Query: 231 GLPTLVLIALKYQLHFDKPVLG---QFN--FIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P ++ I   Y + F  P LG    +N  +I G+          +AL    +A++AE++
Sbjct: 112 GVPVILTI---YLIGFGIPGLGLPRPWNSPYIWGT----------VALVLTYSAYVAEVL 158

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V   Q  AAI LGL+ R   R V+LPQA+R ++P   +  + L K+ +L   +G
Sbjct: 159 RSGIESVHASQRNAAICLGLSERDTMRYVVLPQAIRRVVPANMNMLVALQKDVALLSFIG 218

Query: 346 FADLVSVGG 354
             +++   G
Sbjct: 219 PVEILRQAG 227


>gi|167587290|ref|ZP_02379678.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 231

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 26/234 (11%)

Query: 177 SFPTLTMDTN--AKIFVFSFVLG----IVLSLFATRLSRHFHE-------KTGKALPLLY 223
           S P L        K  V S V G    +VL++   R S             T  AL   Y
Sbjct: 10  SLPVLAQGAGLTVKFAVLSMVFGLMGAVVLAMMGIRQSDGITSGFERVVVNTLAALARAY 69

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +S  ++ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E
Sbjct: 70  VS--VMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSE 116

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   
Sbjct: 117 SMRGAINGIHRGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSV 176

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +L+     +I  T Q + + L    +Y  L  ++         +++L  +
Sbjct: 177 ITVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPAR 230


>gi|219666812|ref|YP_002457247.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Desulfitobacterium hafniense DCB-2]
 gi|219537072|gb|ACL18811.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Desulfitobacterium hafniense DCB-2]
          Length = 214

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 8/126 (6%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L + L+C   A+ +E+VRS ++AVP+GQ EA IAL  +  +  R ++LPQA   ++P   
Sbjct: 88  LTLGLNC--GAYGSEVVRSAILAVPKGQTEAGIALNFSPWQRMRRIILPQAFVMMLPGFG 145

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII-----LIWMFIYLSLSIMIAL 383
           +  + LLK++SL   +  ADL +   +++N +     +I     +I+  I   L+  I  
Sbjct: 146 NLQIELLKSTSLVSLITLADL-TYQASVLNASTMETTLIYSLLLVIYFLIAWPLTRGIRW 204

Query: 384 FMNRLN 389
             NRL 
Sbjct: 205 IENRLT 210


>gi|297243521|ref|ZP_06927453.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
 gi|296888566|gb|EFH27306.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
          Length = 361

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 57/86 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGL+  ++   + +PQA+ +++P
Sbjct: 145 YWAVVLALIMYNGSVVAELVRSGVGNLPNGQREASLALGLSEYQSLTQIEMPQAIIAMMP 204

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
              +Q + +LK+++L   + + DL+ 
Sbjct: 205 AAVTQLVVVLKDTALGSIIMYTDLLQ 230


>gi|262274650|ref|ZP_06052461.1| ABC-type arginine/histidine transport system permease component
           [Grimontia hollisae CIP 101886]
 gi|262221213|gb|EEY72527.1| ABC-type arginine/histidine transport system permease component
           [Grimontia hollisae CIP 101886]
          Length = 240

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           + V   F    +A    TAA+  EI+R  ++A P G++EA  A G++     R ++LP +
Sbjct: 99  AVVEDAFYPCLLAFVLNTAAYTTEILRGAMVATPAGEIEAGKAYGMSRFTILRRIILPSS 158

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            R  +P  +++ + +L  SS+A  V   DL      I  +     +  L    IYL L+ 
Sbjct: 159 FRRALPAYSNEVIFMLHASSIASVVTIIDLTGAARDIYARFYAPFDAFLFVAAIYLCLTF 218

Query: 380 MIALFMNRLNAK 391
            I     RL  +
Sbjct: 219 AIVYGFKRLEHR 230


>gi|237797983|ref|ZP_04586444.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020834|gb|EGI00891.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 221

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 83/154 (53%), Gaps = 5/154 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P   + A+  +L  + P L Q  F F G  ++     E+ +  +A+     A+  EIVR+
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVVNLGAYSTEIVRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +   
Sbjct: 112 GIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 172 ELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|218459930|ref|ZP_03500021.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli Kim 5]
          Length = 227

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 5/163 (3%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIA 239
           L +     + + +  +G+V+  F   L +   EK  +    +Y + F   GLP L+ L  
Sbjct: 51  LGLQVTVSVAIVTLPIGLVIG-FLVALGQQSEEKPLRLAAGIYTTIFR--GLPELLTLFI 107

Query: 240 LKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           + Y +    + +L    ++G       F++  IALS   +A+ +E++ S   A+P+GQ E
Sbjct: 108 IYYGMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYE 167

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           A  +LGL   +  RL++LPQ +R  +P LT+ ++ LLK   ++
Sbjct: 168 AGDSLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKTRPMS 210


>gi|330957139|gb|EGH57399.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 215

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMNISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|170739980|ref|YP_001768635.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168194254|gb|ACA16201.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 227

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 53/88 (60%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EIVR+G+  +P GQ+EAA ALGLT  +  R ++L  A+  + P LTSQ++ ++  
Sbjct: 102 GAYTGEIVRAGMDTIPPGQVEAAEALGLTRAQIYRDIILRPALERVYPALTSQFVLMMLA 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIE 365
           SS+   +   +L +V   I + T ++ E
Sbjct: 162 SSVTSQISAEELTAVANNITSITFRSFE 189



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 33/67 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y    L+G + T  +     +   +IG L   GR S    ++ +C  YVE  RN P L
Sbjct: 11  AEYWPDFLMGALTTLEMTAVATVLGLLIGILCAVGRRSPRAWLSRLCGGYVETVRNTPYL 70

Query: 143 VVIFFLY 149
           + +FFLY
Sbjct: 71  IQVFFLY 77


>gi|91782895|ref|YP_558101.1| ABC lysine/arginine/ornithine transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
 gi|91686849|gb|ABE30049.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 233

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 14/160 (8%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI  +P LVL+ L  Y +        D   L QF+      + P F++  + L     
Sbjct: 58  TTLIRSVPDLVLMLLLFYSIQIAVNDLTDALNLPQFD------IDP-FVAGVLTLGFIYG 110

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K +
Sbjct: 111 AYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIGNNWQVLVKAT 170

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +G AD+V         T      ILI   IYL+++
Sbjct: 171 ALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLAIT 210


>gi|300310827|ref|YP_003774919.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300073612|gb|ADJ63011.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 231

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 61/105 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++    A+  EIVR+G++A+   Q+EAA AL +T  +  R V+L  A+  + P L SQ
Sbjct: 95  VAMTVNLGAYSTEIVRAGMMAIHPSQIEAAQALAMTRWQVIRHVVLTPALEKVYPALASQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  ++  SS+  A+   +L +    +  +T ++ EI L+ M +Y+
Sbjct: 155 FTLMMLASSIVSAISAEELTATANLLDAETFRSFEIYLVVMVLYI 199


>gi|161521539|ref|YP_001584966.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189352291|ref|YP_001947918.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221197221|ref|ZP_03570268.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2M]
 gi|221203893|ref|ZP_03576911.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221210914|ref|ZP_03583894.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD1]
 gi|160345589|gb|ABX18674.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189336313|dbj|BAG45382.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221169870|gb|EEE02337.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD1]
 gi|221176059|gb|EEE08488.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221183775|gb|EEE16175.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2M]
          Length = 229

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           + P F  + + L     A+  E  R   +AVPRGQ+EA  A G+   +  R +L PQ MR
Sbjct: 91  IDPFFAGV-VTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMGGWRVFRRILFPQMMR 149

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
             +P + + +  L+K ++L   +G AD+V 
Sbjct: 150 FALPGIGNNWQVLVKATALVSIIGLADVVK 179


>gi|283783253|ref|YP_003374007.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|298252812|ref|ZP_06976606.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
 gi|283441284|gb|ADB13750.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|297533176|gb|EFH72060.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
          Length = 361

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 57/86 (66%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGL+  ++   + +PQA+ +++P
Sbjct: 145 YWAVVLALIMYNGSVVAELVRSGVGNLPNGQREASLALGLSEYQSLTQIEMPQAIIAMMP 204

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
              +Q + +LK+++L   + + DL+ 
Sbjct: 205 AAVTQLVVVLKDTALGSIIMYTDLLQ 230


>gi|218510403|ref|ZP_03508281.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 209

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 71/124 (57%), Gaps = 5/124 (4%)

Query: 249 PVLGQFNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           PV   F ++G    G  ++P+  ++ +AL     A+ AEI+R G+ ++ +GQ+EA  ALG
Sbjct: 82  PVQAFFIYLGLPSIGIRLAPDAAAV-VALGLNGGAYAAEIIRGGVESIHKGQVEAGRALG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  R ++L  A+R   P L SQ++ L+  SS+  ++   +L S+G  + + + ++ 
Sbjct: 141 LNGFQVFRYIILRPALRVSFPALASQFILLMLTSSVVASISAMELASIGQELESTSFRSF 200

Query: 365 EIIL 368
           E+ L
Sbjct: 201 EVYL 204


>gi|28872358|ref|NP_794977.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855613|gb|AAO58672.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|330965546|gb|EGH65806.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331017860|gb|EGH97916.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 221

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           P   + A+  +L  + P L Q  F F G    G  +S E+ +  +A+     A+  EI+R
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQIS-EWQAAVLAMVINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|290960129|ref|YP_003491311.1| binding-protein-dependent ABC transporter transmembrane protein
           [Streptomyces scabiei 87.22]
 gi|260649655|emb|CBG72770.1| putative binding-protein-dependent transport system integral
           membrane component [Streptomyces scabiei 87.22]
          Length = 216

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  + + + AE+ R+G+  VP GQ EAA AL L   +    V+LPQA+R + P L + 
Sbjct: 93  LGLGLHYSTYTAEVYRAGIDGVPAGQWEAATALSLPRSRTWTAVILPQALRRVAPALGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            + +LK+S + + +G  +++       ++T Q  E I+
Sbjct: 153 VIAMLKDSPMLMTIGVLEMLGEARQFGSRTFQMNEAIV 190


>gi|28869818|ref|NP_792437.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853063|gb|AAO56132.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|331014463|gb|EGH94519.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 262

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 4/109 (3%)

Query: 257 IGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           I G+ ++ P+++ + + L+   +A +AEI R  + ++P  Q EAA +L  T  +  R ++
Sbjct: 120 IAGTYIAFPDWVKVTLGLALPASANVAEIFRGAVASIPSTQWEAARSLAFTRGQIFRSII 179

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTG 361
           LPQ  + ++PP  + Y  +   ++LA  VG  D++    +    +NQTG
Sbjct: 180 LPQCFKRMLPPWMNLYAVITMGTALASLVGVHDVIDTAQIASNTVNQTG 228



 Score = 36.6 bits (83), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 37/64 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++ A+  GF     ++   +   ++ G LVGA  LS  +L+    R++V+VFRN P LV
Sbjct: 46  QWSPALAGGFAQNILISLVAIGLGSVFGLLVGALGLSPFRLLRLPARLWVQVFRNAPWLV 105

Query: 144 VIFF 147
           +I+F
Sbjct: 106 LIYF 109


>gi|15888715|ref|NP_354396.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15156457|gb|AAK87181.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 223

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 65/117 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  IA+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I 
Sbjct: 89  ELSAANIAMVVNLGAYSCEIIRAGIQATPKGQFEAGASLAMTRFETFRHVVLVPSLQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  SS+   +   DL      I ++T +A E  ++   IYL L+I++
Sbjct: 149 PALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRTFRAFEAYMVSTVIYLVLAILL 205


>gi|89897435|ref|YP_520922.1| hypothetical protein DSY4689 [Desulfitobacterium hafniense Y51]
 gi|219670586|ref|YP_002461021.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|89336883|dbj|BAE86478.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540846|gb|ACL22585.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 225

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 5/121 (4%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + +IVR  L ++PR Q ++  ALGL+  +  R VL+PQA+R ++P   +    ++
Sbjct: 102 WGTAEMGDIVRGALESLPRHQSDSGKALGLSFGQLYRYVLIPQAVRRMLPATINLATRMV 161

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNA 390
           K +SLAV +G  +++ VG  +I      +     W++     +Y  +   ++    RL A
Sbjct: 162 KTTSLAVLIGVVEILKVGQQMIENARFTVPTASFWIYGLIFILYFIMCYPLSRLAKRLEA 221

Query: 391 K 391
           K
Sbjct: 222 K 222


>gi|302540997|ref|ZP_07293339.1| amino acid ABC transporter, permease [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302458615|gb|EFL21708.1| amino acid ABC transporter, permease [Streptomyces himastatinicus
           ATCC 53653]
          Length = 277

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 21/221 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +   FV +  LG++ +L   R SRH   +   A+   Y+   +I   P L+ + +
Sbjct: 52  LTLKLSLAAFVLACALGLLGAL--ARRSRHALVRAPAAV---YVE--VIRNTPVLLQMFV 104

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   F  P         G  +SP   +   AL     A++ EI R+G+ AVPRGQ EA+
Sbjct: 105 AY---FALPS-------AGLRLSP-VQAGIAALGLNVGAYLTEIFRAGIQAVPRGQSEAS 153

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             L L+  +    V+LPQA+R++ P + +Q + ++  SSL  A+   +L      I ++ 
Sbjct: 154 RVLALSPFRTFLHVVLPQALRNVYPAVINQLVQIILGSSLLSAISVPELTGTAMVINSRN 213

Query: 361 GQAIEIILIWMFIYLSLS---IMIALFMNRLNAKIALKEKK 398
              I++  I   +YL L+   +++A  + R   K  L+  +
Sbjct: 214 LLTIQVFGIAAVLYLVLTNAVVLVAELIGRAAFKPPLRPMR 254


>gi|269968080|ref|ZP_06182117.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269827326|gb|EEZ81623.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 222

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAE 283
           L  G P LV I L Y      P  GQF+ +  S     +S  +    +AL+  TAA+  +
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSTQ 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA  
Sbjct: 109 LFKGAFNAIPSGQWQACRALGM-NKTATLKVLLPYAIRRAVPAYSNEVILVFKGTSLAST 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 168 ITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|238896098|ref|YP_002920834.1| glutamine ABC transport system ATP-binding component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548416|dbj|BAH64767.1| glutamine ABC transport system ATP-binding component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 506

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 20/152 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PL+ +  F ++ LP L  +         +P+LG   FI G           ++++  
Sbjct: 65  RSVPLMVLLVF-VYNLPQLFPVT--------QPLLG-VPFIAG----------LVSMTVT 104

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEI R GL++V +GQ EA  AL  +     RL+++PQA R   P L ++Y+ ++K
Sbjct: 105 EAAYMAEIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISQPTLINEYITIIK 164

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            SS+   V   +L+  G  +  Q    +E +L
Sbjct: 165 LSSILSVVSLPELLLTGQRLYAQNFLVMETLL 196


>gi|254472990|ref|ZP_05086388.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211957711|gb|EEA92913.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 199

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 12/130 (9%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+IS F   G P LV + L Y   +  P L  F   I G T +       + L+ + +A+
Sbjct: 33  LFISFFR--GTPLLVQLFLFY---YGLPQLVSFLTAIDGVTAA------IVGLTLHFSAY 81

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE +R+ ++ V R Q EAA ++G++  +  R ++LPQA R   P L + +++L+K++SL
Sbjct: 82  MAESIRAAILGVDRSQWEAAKSIGMSTGQMMRRIILPQAARVAAPTLINYFIDLIKSTSL 141

Query: 341 AVAVGFADLV 350
           A  +G  +L+
Sbjct: 142 AFTLGVTELM 151


>gi|307131834|ref|YP_003883850.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Dickeya dadantii 3937]
 gi|306529363|gb|ADM99293.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Dickeya dadantii 3937]
          Length = 238

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R V+LP A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCVILPGALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA  V   DL+ V   I   T Q      I   +YL++S ++I+LF
Sbjct: 167 VILMLHSTALAFTVTVPDLLKVARDINAATYQPFYAFGIAGVMYLAVSFVLISLF 221


>gi|114707669|ref|ZP_01440564.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536913|gb|EAU40042.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
          Length = 235

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 68/125 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F+S  IAL    +A+ +E+  +   A+PRGQ E A ALG+      RLV+ PQ +R  +
Sbjct: 101 SFVSGMIALGLVFSAYASEVFVAAFRAIPRGQYEGANALGIGSFMTMRLVIFPQLVRIAL 160

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L++ ++ LLK+++L   +G  D++         T +        + +YL L+++ ++ 
Sbjct: 161 PGLSNLWMILLKDTALVSVIGLTDILRQSQIAARVTREPFLFFGTAILLYLVLTLISSIA 220

Query: 385 MNRLN 389
           + R++
Sbjct: 221 IGRID 225


>gi|77456453|ref|YP_345958.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380456|gb|ABA71969.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 221

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 225 STFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYT 277
           +T L+F  P L  L+ L  +L  + P+L Q  F+       G  VS  F +  I ++   
Sbjct: 41  ATILVFRTPYLQKLVGLYVELARNTPLLIQLFFVYFALPALGIKVS-GFTAAIITMTFLG 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E++R+G+ AVP+ Q+E+  ++GL+H +  R V+LPQA    +P L + ++ LLK 
Sbjct: 100 GAYLTEVLRAGVDAVPQAQLESGRSIGLSHGQLLRYVILPQAGILSLPSLFANFIFLLKE 159

Query: 338 SSLAVAVGFADLV 350
           +++  AV   +++
Sbjct: 160 TTVVSAVAVPEIL 172


>gi|325293714|ref|YP_004279578.1| octopine transport system permease protein occM [Agrobacterium sp.
           H13-3]
 gi|325061567|gb|ADY65258.1| octopine transport system permease protein occM [Agrobacterium sp.
           H13-3]
          Length = 229

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 63/119 (52%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  A G+      R + LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRAFGMGRFTLIRRIWLPRAIRIALPTIAGEVVMQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +++    YL L+ +IA     +  ++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVAYKVRQDTLLVYEPLIVVTVFYLILTAIIARCFGLIEQQVPVRR 229


>gi|258545108|ref|ZP_05705342.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258519627|gb|EEV88486.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 24/170 (14%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----------------- 270
           L+FGL  LV IA+ Y+L F  PV   +  I  S  +P  + L+                 
Sbjct: 32  LVFGL--LVCIAVVYRLPFFAPVCRAY--IELSRNTPLLVQLFFLYYGLPKFGIRLSGFA 87

Query: 271 ---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              I L+   AA++AE  R G+ AV R Q EAA+A+GLT  +A   V+ PQ++ + IP L
Sbjct: 88  CGVIGLTFLGAAYMAEAFRGGIAAVSRVQGEAALAVGLTPAQAFLYVIFPQSLAASIPAL 147

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +  L L+K +S+   +   +L++V   +I    +  E + + +  Y S+
Sbjct: 148 VANTLFLIKETSVVGVLAVVELLNVSKELIGLDYKTNEALFLLVLGYASI 197



 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 82  DSSYATAILVGFVNTFW----LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D SY   +L  +V   W    L+  G+  + + G LV    +      A +CR Y+E+ R
Sbjct: 2   DFSYLREVLPQYVAATWQTLQLSLWGVALSLVFGLLVCIAVVYRLPFFAPVCRAYIELSR 61

Query: 138 NIPPLVVIFFLY 149
           N P LV +FFLY
Sbjct: 62  NTPLLVQLFFLY 73


>gi|119387584|ref|YP_918618.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378159|gb|ABL72922.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 217

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 64/121 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS YTAA+ AEIVR G+ AVP     AA +LG++  +  R ++LP A R  +P     
Sbjct: 93  IVLSMYTAAYCAEIVRGGIEAVPATTRRAARSLGMSWGQDMREIVLPLATRVALPSWIGL 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L ++K+S+L   V   +L+     +I +  + + +++I    Y  +S  +A F   L  
Sbjct: 153 ALGVMKDSALVYVVQVTELLRSTQILITRLQEPLLLLMICGAFYFVISFPLARFGGYLEK 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|306822263|ref|ZP_07455644.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309802814|ref|ZP_07696916.1| amino acid ABC transporter, permease family protein
           [Bifidobacterium dentium JCVIHMP022]
 gi|304554425|gb|EFM42331.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308220567|gb|EFO76877.1| amino acid ABC transporter, permease family protein
           [Bifidobacterium dentium JCVIHMP022]
          Length = 230

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S ++G+ +    T L R  H +  K L   Y+  +L+ G P L+L+ + Y   +  P+L 
Sbjct: 31  SVLIGMFIGTLLTCLGR-IHNRMAKTLITAYV--WLMRGTPLLLLLFISY---YGLPMLL 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               +  ++  P   +L IA S   +AF  E +R+G  A+  GQ++AA +L L      R
Sbjct: 85  SAFGVDINSSDPLIFAL-IAFSLSLSAFFEETLRAGFDAINNGQLQAAQSLSLPKLTYYR 143

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--QAIEIILIW 370
            +++PQA+ + +P   S  +  +K SS+   +G  D+     T+  +      +EI L  
Sbjct: 144 RIIIPQALINSLPNFASLLITAIKQSSILFTIGIMDIYEKAITLSAEDFGLWQLEIFLAL 203

Query: 371 MFIYLSLSIMI 381
           M IY  L+++I
Sbjct: 204 MLIYWILAVII 214


>gi|260550581|ref|ZP_05824790.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           RUH2624]
 gi|260406292|gb|EEW99775.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           RUH2624]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 34/202 (16%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 34  VGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFTCG 89

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 90  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLQPIQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---- 365
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E    
Sbjct: 130 IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 189

Query: 366 IILIWMFIYLSLSIMIALFMNR 387
           +I+ ++ I L +SI+ +   +R
Sbjct: 190 LIMAYLIILLPVSILTSYLEHR 211


>gi|213023865|ref|ZP_03338312.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 177

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L     V+     I    + P    + I L     A+  E 
Sbjct: 2   TTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGI-ITLGFIYGAYFTET 60

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G TH +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 61  FRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 120

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 121 GLEDVVK 127


>gi|83720040|ref|YP_442303.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|257138498|ref|ZP_05586760.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83653865|gb|ABC37928.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 229

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 64/129 (49%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R   +AVPRGQ+EA  A G++  +    ++ PQ MR  +P
Sbjct: 94  FVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGMRVFARIMFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  L+K ++L   +G AD+V         T      IL+   +YL+++    L +
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALVYLAITTASNLVL 213

Query: 386 NRLNAKIAL 394
            +L  + ++
Sbjct: 214 KQLEKRYSI 222


>gi|89893485|ref|YP_516972.1| hypothetical protein DSY0739 [Desulfitobacterium hafniense Y51]
 gi|89332933|dbj|BAE82528.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 217

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 8/126 (6%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L + L+C   A+ +E+VRS ++AVP+GQ EA IAL  +  +  R ++LPQA   ++P   
Sbjct: 91  LTLGLNC--GAYGSEVVRSAILAVPKGQTEAGIALNFSPWQRMRRIILPQAFVMMLPGFG 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII-----LIWMFIYLSLSIMIAL 383
           +  + LLK++SL   +  ADL +   +++N +     +I     +I+  I   L+  I  
Sbjct: 149 NLQIELLKSTSLVSLITLADL-TYQASVLNASTMETTLIYSLLLVIYFLIAWPLTRGIRW 207

Query: 384 FMNRLN 389
             NRL 
Sbjct: 208 IENRLT 213


>gi|257125933|ref|YP_003164047.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049872|gb|ACV39056.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 218

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 56/97 (57%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           NF G   V   + +  I      AA++ EI+RSG+ ++ +GQ E A  LG ++ +    V
Sbjct: 78  NFGGYKIVLAPYTAATITFIINYAAYLVEIMRSGIESIDKGQHEVAKVLGYSYWQKIIYV 137

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +LPQA+R ++P L ++ + L+K++SL   +   +++ 
Sbjct: 138 ILPQAIRRVLPTLGNEAITLIKDTSLVYVLAVTEVMK 174


>gi|330874082|gb|EGH08231.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 221

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 7/155 (4%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           P   + A+  +L  + P L Q  F F G    G  +S E+ +  +A+     A+  EI+R
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQIS-EWQAAVLAMVINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|315181772|gb|ADT88685.1| arginine ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 141

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 2/129 (1%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F ++ +AL+  TAA+ +++ +    A+P GQ +A  ALG+ ++ AT  VLLP A+R 
Sbjct: 8   KPWFCAM-VALALNTAAYSSQLFKGAFNAIPDGQWQACRALGM-NKIATLRVLLPYALRR 65

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P  +++ + + K +SLA  +   DL+     I  QT   + +  +    YLS++ ++ 
Sbjct: 66  AVPAYSNEVILVFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGVAGLFYLSVNGLLT 125

Query: 383 LFMNRLNAK 391
           L   ++  K
Sbjct: 126 LVFRQIERK 134


>gi|310768187|gb|ADP13137.1| Histidine transport system permease protein [Erwinia sp. Ejp617]
          Length = 228

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 5/160 (3%)

Query: 220 PLLYIS---TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           PL  IS   T LI G+P LVL+ L  Y L      +  F       + P    + I L  
Sbjct: 44  PLAVISEVYTTLIRGVPDLVLMLLIFYGLQIALNQVTDFFGFAQFDIDPMVAGI-ITLGF 102

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+  E  R   +AVP+GQ+EAA A G T  +  R +L P  MR  +P + + +  +L
Sbjct: 103 IYGAYFTETFRGAWMAVPKGQVEAATAFGFTRSQTFRRILFPAMMRFALPGIGNNWQVIL 162

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           K ++L   +G  D+V         T Q     ++   IYL
Sbjct: 163 KATALVSLLGLEDVVKATQLAGKSTWQPFWFAIVAGIIYL 202


>gi|115360207|ref|YP_777345.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115285495|gb|ABI91011.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 229

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 17/164 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFD 247
           S VLG+V +  + +LS +   +  KAL   Y  T LI  +P LVL+ L +      L+  
Sbjct: 28  SLVLGLVGA--SAKLSTN---RALKALGTFY--TTLIRAVPDLVLMLLLFYGIQILLNMA 80

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              LG         + P F++  I L     A+  E  R   +AVPRGQ+EA  A G++ 
Sbjct: 81  TDALGWDQI----DIDP-FVAGVITLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMSG 135

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            +    +L PQ MR  +P + + +  L+K ++L   +G AD+V 
Sbjct: 136 WRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179


>gi|313115583|ref|ZP_07801042.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622098|gb|EFQ05594.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 11/157 (7%)

Query: 243 QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           QL  + P+L Q  FI       G   + E   +   L+    +++AE  RSGL A+   Q
Sbjct: 58  QLSRNTPLLVQLFFIYYGLPKVGIRTNAEICGI-AGLAFLGGSYMAEAFRSGLEAIEPIQ 116

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+A +LG+   +  R ++LPQAM + +P   +  + LLK +S+  A+   DL+     +
Sbjct: 117 TESAYSLGMNRWQTMRYIILPQAMSTSMPAFMANVIFLLKETSVFSAISLMDLMFTAKDL 176

Query: 357 INQTGQAIE----IILIWMFIYLSLSIMIALFMNRLN 389
           I    + IE    +++ ++ I L +SI+ +L   RL 
Sbjct: 177 IGMYSKTIECLFLLVVFYLIILLPVSIVGSLIERRLR 213


>gi|171317514|ref|ZP_02906704.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097343|gb|EDT42188.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 230

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 25/233 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSR---HFHEKTGKALPLL---YI 224
           S P L        K  V S V G    ++L++   R S     F      AL  L   Y+
Sbjct: 10  SLPVLAQGAVLTVKFAVLSMVFGLLGAVMLAMMGIRQSEPLEGFERIWVNALAWLARAYV 69

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 70  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     +I  T Q + + L    +Y  L  ++         +++L  +
Sbjct: 177 TVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPAR 229


>gi|153833137|ref|ZP_01985804.1| arginine ABC transporter, permease protein [Vibrio harveyi HY01]
 gi|156976756|ref|YP_001447662.1| arginine transporter permease subunit ArtM [Vibrio harveyi ATCC
           BAA-1116]
 gi|148870567|gb|EDL69475.1| arginine ABC transporter, permease protein [Vibrio harveyi HY01]
 gi|156528350|gb|ABU73435.1| hypothetical protein VIBHAR_05531 [Vibrio harveyi ATCC BAA-1116]
          Length = 222

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAE 283
           L  G P LV I L Y      P  GQF+ +  S     +S  +    +AL+  TAA+  +
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSTQ 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA  
Sbjct: 109 LFKGAFNAIPSGQWQACRALGM-NKAATLKVLLPYAIRRAVPAYSNEVILVFKGTSLAST 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 168 ITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|28872359|ref|NP_794978.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855614|gb|AAO58673.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 215

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMDISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|239503579|ref|ZP_04662889.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii AB900]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 34/202 (16%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 34  VGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFTCG 89

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 90  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLQPIQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---- 365
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E    
Sbjct: 130 IFRYVVFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 189

Query: 366 IILIWMFIYLSLSIMIALFMNR 387
           +I+ ++ I L +SI+ +   +R
Sbjct: 190 LIMAYLIILLPVSILTSYLEHR 211


>gi|227820556|ref|YP_002824527.1| glutamine ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339555|gb|ACP23774.1| glutamine ABC transporter, permease protein GlnP [Sinorhizobium
           fredii NGR234]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 1/135 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T++P   +  +AL     A+ AE+VR  + A+ R Q EA IAL L+  +A R ++LPQ
Sbjct: 78  GITLTP-LQAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIALNLSRYQAMRHIILPQ 136

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+  ++P   +  + LLK +++   +   D+      +  QTG  +      + +Y  ++
Sbjct: 137 ALPLMLPTFGNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGSTLIPFATILVLYFVMA 196

Query: 379 IMIALFMNRLNAKIA 393
            +I+L M  L  +++
Sbjct: 197 WVISLGMRWLERRVS 211


>gi|222082455|ref|YP_002541820.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727134|gb|ACM30223.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 222

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 44/70 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S Y AA+ +EI RSG  AVPRG +EA   +GLT  +  R +LLP+    ++PP  + 
Sbjct: 93  IGISIYGAAYFSEIFRSGFQAVPRGHIEAGECVGLTQGQIVRRILLPEMTMLVLPPSLNM 152

Query: 331 YLNLLKNSSL 340
            + L+K +++
Sbjct: 153 AIILMKETAV 162


>gi|302334976|ref|YP_003800183.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
 gi|301318816|gb|ADK67303.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
          Length = 439

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 68/115 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + +S  + A++ E++R G+ AV  GQ EAA +LGL+  +A   V+ PQ +++ IP
Sbjct: 262 FVAGLVTISLNSTAYMMEVLRGGIEAVDAGQTEAARSLGLSQWQAMTKVVFPQGIKNAIP 321

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            L+++ +  +K+SS+   +G  DL+    T+     + +E+  +    YL L+++
Sbjct: 322 ALSNELVVNIKDSSVLSVIGVFDLMFATTTVAGIYYRQLEVYAVATLCYLILTMI 376


>gi|298291728|ref|YP_003693667.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296928239|gb|ADH89048.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 227

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 65/111 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+    A+  EI+R+G  ++ RGQ+EAA  LGL+  +    V++   +  + P LTSQ
Sbjct: 95  VALTINVGAYTTEIMRAGFDSIVRGQIEAAEGLGLSKAQIYWHVIIWPGIERVYPALTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++ L+  SS+   +   +L +V   I ++T ++ E  ++   IY++LS ++
Sbjct: 155 FVLLMLASSVTSQISAEELTAVANYIQSETYRSFETYIVVALIYVALSFVM 205



 Score = 43.9 bits (102), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 32/62 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           ++L G   T  LAF  ++   IIG     GR   N L+  +C  YVE  RN P LV IF 
Sbjct: 16  SLLDGATLTLELAFIAVVCGAIIGVFGAIGRRGGNPLIERLCGAYVEGIRNTPLLVQIFL 75

Query: 148 LY 149
           +Y
Sbjct: 76  VY 77


>gi|227818594|ref|YP_002822565.1| ArtM, ABC-type arginine/histidine transport system, permease
           component ArtM [Sinorhizobium fredii NGR234]
 gi|36958849|gb|AAQ87274.1| Transporter [Sinorhizobium fredii NGR234]
 gi|227337593|gb|ACP21812.1| putative ArtM, ABC-type arginine/histidine transport system,
           permease component ArtM [Sinorhizobium fredii NGR234]
          Length = 229

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 65/119 (54%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AE++R  L+AVP+G++EA  + G++     R + LP+A+R  +P +  + +  LK 
Sbjct: 111 AAYEAEVLRGALLAVPKGELEAGRSFGMSSSTLFRRIWLPRAIRIALPTIAGEVVLQLKA 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LA  V   DL +V   +   T    E +++    Y+ L+++I      + A++ ++ 
Sbjct: 171 TPLAFTVTVMDLYAVAYKVRQDTLLVYEPLMVVTVFYVCLTLIITRAFKIVEAQVPVRR 229


>gi|83647882|ref|YP_436317.1| arginine/histidine ABC transporter permease [Hahella chejuensis
           KCTC 2396]
 gi|83635925|gb|ABC31892.1| ABC-type arginine/histidine transport system, permease component
           [Hahella chejuensis KCTC 2396]
          Length = 240

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 4/169 (2%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +++ T++  G P L+ +   Y +++  P V G  +      ++  F    +A    TAA+
Sbjct: 63  IWLYTYMFRGTPLLIQL---YLIYYGLPAVPGVKDSFIWPLLANAFYPAMLAFILNTAAY 119

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI+R  +   P+G++EAA A G++   + R ++LP A R  +P  +++ + +L  S++
Sbjct: 120 TTEIIRGAIQQTPQGEIEAAKAYGMSWWLSMRRIILPNAFRRALPAYSNEVIFMLHASAI 179

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           A  V   DL      I ++     E       IYL L+  I     RL 
Sbjct: 180 ASVVTIIDLTGAARYIYSKYYAPFEAFTFVALIYLCLTFTIIYIFKRLE 228


>gi|218680555|ref|ZP_03528452.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 894]
          Length = 120

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 24/130 (18%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L    LK+ + F                     +   AL+  TAA
Sbjct: 10  PFLVQLFFIFFGLPSL---GLKFSVSF---------------------AAIAALTVNTAA 45

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAE++R G+  +P GQ+EA  ALGL  R+    ++L  ++R++ P L++Q++ L+  SS
Sbjct: 46  YIAEVLRGGVDGLPYGQIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLTSS 105

Query: 340 LAVAVGFADL 349
           +  ++   +L
Sbjct: 106 VVASISAPEL 115


>gi|158424305|ref|YP_001525597.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331194|dbj|BAF88679.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 224

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++ I ++    A++ EI R+G  +    +MEAA  +G +  +  R V+LP   R + P
Sbjct: 90  FAAVVIGMTLNAGAYLTEIQRAGFESRRVSEMEAAEVMGFSRLQQIRYVILPHVARVLFP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           PL++Q++ +   +S+A   G  +L      I +QT ++IEI  +   IY+
Sbjct: 150 PLSNQFIIVTLGTSMAAVFGVEELTGEAFNINSQTFRSIEIFSVTAGIYV 199



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 9/67 (13%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           LAF G +    IGTL  A R    + +A I  VYV  F N P LV I+FLY        +
Sbjct: 30  LAFCGGL---FIGTLCAAIRSFGPRWLARIVGVYVVFFTNTPQLVQIYFLY------FAL 80

Query: 159 PDHSIVL 165
           PD  I+L
Sbjct: 81  PDSGILL 87


>gi|154483451|ref|ZP_02025899.1| hypothetical protein EUBVEN_01154 [Eubacterium ventriosum ATCC
           27560]
 gi|149735703|gb|EDM51589.1| hypothetical protein EUBVEN_01154 [Eubacterium ventriosum ATCC
           27560]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 27/162 (16%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F+ +  +  PLL    FL FGLP + ++    Q      V+G   F+GGS          
Sbjct: 55  FYIELSRNTPLLIQLFFLYFGLPKVGIVLTSEQCG----VIG-LAFLGGS---------- 99

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
                    ++AE  RSGL  V   Q+++A++LG+   +  R V+LPQA+ + IP   + 
Sbjct: 100 ---------YMAEAFRSGLDNVESIQIQSALSLGMKKSQTFRYVILPQAVSNSIPAFCAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI 369
            + L+K +S+  AV  ADL+ +   +I    +T +A+ +++I
Sbjct: 151 IIFLIKETSVFSAVALADLMFITKDLIGIYYKTDEALFMLVI 192


>gi|66043567|ref|YP_233408.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254274|gb|AAY35370.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330971845|gb|EGH71911.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 221

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 84/154 (54%), Gaps = 5/154 (3%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P   + A+  +L  + P L Q  F F G  ++     E+ +  +A+     A+  EIVR+
Sbjct: 52  PFATIFAIYVELIRNTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+P+GQ+EA+ AL ++  +A R V+L  A+  + P L+SQ + ++  S++   +   
Sbjct: 112 GIQAIPKGQLEASAALAMSRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSAVCSQIATE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +L      I ++  ++ E  ++   IYL+++++I
Sbjct: 172 ELSFFANFIQSRNFRSFETYIVTTLIYLAMALLI 205


>gi|291616414|ref|YP_003519156.1| YckJ [Pantoea ananatis LMG 20103]
 gi|291151444|gb|ADD76028.1| YckJ [Pantoea ananatis LMG 20103]
 gi|327392854|dbj|BAK10276.1| probable amino-acid ABC transporter permease protein YckJ [Pantoea
           ananatis AJ13355]
          Length = 221

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 59/104 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LGLT  +    V+LP +++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRSQTFLRVVLPPSLQRIYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           SS+   V + +L      I ++T  + E+  +   IYL+LSI++
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYSVTTLIYLALSIVM 205


>gi|163868115|ref|YP_001609319.1| ABC transporter, permease protein [Bartonella tribocorum CIP
           105476]
 gi|161017766|emb|CAK01324.1| ABC transporter, permease protein [Bartonella tribocorum CIP
           105476]
          Length = 240

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 14/190 (7%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSPEFMS 268
           H      + LP L     + +GL +L+     Y   F+  V+   N F+ G         
Sbjct: 60  HLFSTVFRGLPELLTLFLVYYGLQSLIQNIFDY---FNLEVMFSINAFVAG--------- 107

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS   AAF  E+         +GQ EAA ALGL+       ++ PQ +R+ +P L+
Sbjct: 108 -VLALSMVFAAFSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRIVFPQLIRNALPGLS 166

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +L LLK++SL   +   DL+      +  T + +   L+   +YL  S   A  +  L
Sbjct: 167 NNWLTLLKDTSLVSTIALVDLMRQTNLAVAATNKPMLFYLVACLLYLLFSAFFAAILRHL 226

Query: 389 NAKIALKEKK 398
                   KK
Sbjct: 227 ETYTQRGYKK 236


>gi|331017861|gb|EGH97917.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 215

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMDISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|311278731|ref|YP_003940962.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308747926|gb|ADO47678.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 228

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+     +G   F     + P    + I L     A+
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTITDAMGMAQF----DIDPMIAGI-ITLGFIYGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVP+G +EAA A G T R+  R +L P  MR  +P + + +  +LK ++L
Sbjct: 108 FTETFRGAFLAVPKGHIEAATAFGFTSRQTFRRILFPAMMRFALPGIGNNWQVILKATAL 167

Query: 341 AVAVGFADLVS 351
              +G  D+V 
Sbjct: 168 VSLLGLEDVVK 178


>gi|148360894|ref|YP_001252101.1| amino acid (glutamine) ABC transporter permease [Legionella
           pneumophila str. Corby]
 gi|148282667|gb|ABQ56755.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila str. Corby]
          Length = 215

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    ++A+ AEI+R+G+ ++P+GQ EAA+ L +      + ++LPQ +++I P + ++
Sbjct: 88  VAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPTFYLWKDIILPQVIKNIFPAMINE 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL+    T+  Q       + I  F Y SL +++     ++  
Sbjct: 148 MIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFYYYSLVLLLEALGKKIEK 207

Query: 391 K 391
           +
Sbjct: 208 R 208


>gi|300693529|ref|YP_003749502.1| amino acid ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
 gi|299075566|emb|CBJ34859.1| amino acid ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
          Length = 261

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++P F ++ I LS + AAF AE +R+G+ AVP   +EAA +LG + R+    V LP A R
Sbjct: 112 LTPLFWAVAI-LSLHKAAFHAEALRAGIEAVPPAMLEAAASLGFSARERLWRVQLPLAFR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           + +P L +  + L+K SSLA A+   +L
Sbjct: 171 AALPSLMNNTVELVKASSLASAIAVGEL 198


>gi|257063101|ref|YP_003142773.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
 gi|256790754|gb|ACV21424.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
          Length = 230

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S     F+AEI RS + +VP  Q EAA ++GL+  +    ++LPQA+R+ IP  +  
Sbjct: 103 ITYSLNQGGFMAEIFRSAIESVPASQTEAAYSVGLSGAQTFLRIVLPQAVRTAIPSFSVN 162

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            ++L +++SLA  +G  D++     I + T   +E
Sbjct: 163 LVSLFQDTSLAFMLGVVDVMGRAELIQSATHHVLE 197


>gi|213971834|ref|ZP_03399936.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301383371|ref|ZP_07231789.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302064064|ref|ZP_07255605.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302134968|ref|ZP_07260958.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213923380|gb|EEB56973.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 215

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMDISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|91225769|ref|ZP_01260798.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91189658|gb|EAS75933.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 222

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAE 283
           L  G P LV I L Y      P  GQF+ +  S     +S  +    +AL+  TAA+  +
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSTQ 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + +    A+P GQ +A  ALG+ ++ AT  VLLP A+R  +P  +++ + + K +SLA  
Sbjct: 109 LFKGAFNAIPSGQWQACRALGM-NKTATLKVLLPYAIRRAVPAYSNEVILVFKGTSLAST 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 168 ITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKK 215


>gi|116617263|ref|YP_817634.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096110|gb|ABJ61261.1| amino acid ABC transporter membrane protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 222

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 17/175 (9%)

Query: 195 VLGIVLSLFATRLSRHF-HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           VLG +++L       HF H K       +Y+S F   G+P LV + L Y   +  P +  
Sbjct: 35  VLGGIITLL------HFSHYKVIHWFASIYVSFFR--GMPALVQLFLIY---YGLPQI-- 81

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F    G    P  ++  I L    +A+++E+ R+ + +V RGQ+EA  +L +   K  R 
Sbjct: 82  FPIFKGL---PAIIATVIGLGFKQSAYLSEVFRAAVNSVDRGQIEAGQSLNIKSFKIFRY 138

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           V+LPQA  + +P   + ++ LLK +SLA  +G  ++ + G  +   + +  E  L
Sbjct: 139 VILPQAFINALPATGNTFVGLLKETSLAFTLGITEVFAEGKMLAGDSFKYFETYL 193



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           A ++G ++     S  K++ W   +YV  FR +P LV +F +Y  +  + PI
Sbjct: 33  AIVLGGIITLLHFSHYKVIHWFASIYVSFFRGMPALVQLFLIYYGLPQIFPI 84


>gi|170742607|ref|YP_001771262.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196881|gb|ACA18828.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 238

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 10/162 (6%)

Query: 227 FLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+  G P LV + L Y    Q   D   L  + F       P + +L+ ALS  T A+ A
Sbjct: 59  FVFRGTPLLVQLFLIYYGLGQFRQDLQALNLWWFF----REPYWCALF-ALSLNTGAYTA 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G++AVP G + A  A G++       V LP A R  +P   ++ + ++K+++LA 
Sbjct: 114 EIVRGGVLAVPHGALLAGRACGMSRLTLLSRVTLPLAARQALPAYGNEVILVVKSTALAS 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYL-SLSIMIAL 383
            +   ++  +   +I Q+ +A+EI       YL ++S +IAL
Sbjct: 174 TITIMEVTGIAQKLIAQSFRALEIFCCAAAFYLAAVSAIIAL 215


>gi|330874083|gb|EGH08232.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 215

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMDISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|281491440|ref|YP_003353420.1| amino acid ABC transporter permease [Lactococcus lactis subsp.
           lactis KF147]
 gi|281375158|gb|ADA64671.1| Amino acid ABC transporter, permease protein [Lactococcus lactis
           subsp. lactis KF147]
          Length = 295

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 68/132 (51%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + + +A +    A+ +E +R+ + +V +GQ+EAA +LG+T+ +    V LP+A    
Sbjct: 142 PAMLFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVA 201

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
             PL +  + LLK++SLA   G  ++ +    I   T +  E  L    +Y  + I+  L
Sbjct: 202 TAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVYWPICIIFEL 261

Query: 384 FMNRLNAKIALK 395
            +  L  K+ ++
Sbjct: 262 LIRGLERKLDVR 273


>gi|15672920|ref|NP_267094.1| amino acid ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|12723874|gb|AAK05036.1|AE006328_4 amino acid ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406481|gb|ADZ63552.1| polar amino acid transport system permease protein [Lactococcus
           lactis subsp. lactis CV56]
          Length = 295

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 68/132 (51%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + + +A +    A+ +E +R+ + +V +GQ+EAA +LG+T+ +    V LP+A    
Sbjct: 142 PAMLFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVA 201

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
             PL +  + LLK++SLA   G  ++ +    I   T +  E  L    +Y  + I+  L
Sbjct: 202 TAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVYWPICIIFEL 261

Query: 384 FMNRLNAKIALK 395
            +  L  K+ ++
Sbjct: 262 LIRGLERKLDVR 273


>gi|21221280|ref|NP_627059.1| amino acid ABC transporter transmembrane protein [Streptomyces
           coelicolor A3(2)]
 gi|256787535|ref|ZP_05525966.1| amino acid ABC transporter transmembrane protein [Streptomyces
           lividans TK24]
 gi|289771430|ref|ZP_06530808.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           lividans TK24]
 gi|6689163|emb|CAB65560.1| probable amino acid ABC transporter protein, integral membrane
           component [Streptomyces coelicolor A3(2)]
 gi|289701629|gb|EFD69058.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           lividans TK24]
          Length = 216

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 18/201 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+V +L     SR      G       + T  +   P LV      QL F   VL 
Sbjct: 33  SFGLGLVWALLMRVPSRWVTWPVG-------VVTEFVRNTPLLV------QLFFLFYVLP 79

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           ++N I  S ++   +++ +  S YT     ++ R+G+  VP GQ EAA AL L  R+   
Sbjct: 80  EWN-ITFSALTTGVVAIGLHYSTYTM----QVYRAGIEGVPVGQWEAATALNLPMRRTWT 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA+R + P L +  +++LK++ L +A+   +++        Q  Q  E + +   
Sbjct: 135 AVILPQAIRRVTPALGNYVISMLKDTPLLMAITVLEMLGEARLFSQQNFQFTEPLTVIGV 194

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
            ++ +S + +L +  L  ++A
Sbjct: 195 AFIVISYLASLALRALERRLA 215


>gi|167836529|ref|ZP_02463412.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 217

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 63/120 (52%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L   TA  + EI R  + AV  GQ EAA  LGL+  +    VL+PQ  R  +P   +  +
Sbjct: 92  LGLITAVNLGEIYRGAMKAVSSGQFEAAKVLGLSGIRQYTDVLVPQIFRVALPSAATYAI 151

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK++++A  +G  ++      +  QT + +E+ +I   +Y  +S+++A     L+ ++
Sbjct: 152 GLLKDTAVASTIGVPEMAQAAYRVSQQTFKGLEVYVISGLLYFGISLVMAYISRNLDKRL 211


>gi|299770574|ref|YP_003732600.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. DR1]
 gi|298700662|gb|ADI91227.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. DR1]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 34/202 (16%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 34  VGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFACG 89

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 90  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLQPIQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---- 365
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E    
Sbjct: 130 IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 189

Query: 366 IILIWMFIYLSLSIMIALFMNR 387
           +I+ ++ I L +SI+ +   +R
Sbjct: 190 LIMAYLIILLPVSILTSYLEHR 211


>gi|262278739|ref|ZP_06056524.1| amino acid ABC transporter membrane protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259090|gb|EEY77823.1| amino acid ABC transporter membrane protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 34/202 (16%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 34  VGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFACG 89

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 90  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLQPIQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---- 365
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E    
Sbjct: 130 IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 189

Query: 366 IILIWMFIYLSLSIMIALFMNR 387
           +I+ ++ I L +SI+ +   +R
Sbjct: 190 LIMAYLIILLPVSILTSYLEHR 211


>gi|224368336|ref|YP_002602499.1| ABC-type arginine/histidine transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223691052|gb|ACN14335.1| ABC-type arginine/histidine transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 233

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 26/228 (11%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLI 229
           R L+   LT++  A   +  FVL I LS+   R+S++         PL+    +   F  
Sbjct: 12  RFLNGTILTLEITALSVIIGFVLAIPLSIM--RVSKN---------PLIRMPAFCFNFYF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLY----IALSCYTAAFIAEI 284
            G P LV + L Y         GQF +F+    +   F   Y    ++L+  TAA+ +EI
Sbjct: 61  RGTPLLVQLFLIYYGS------GQFQSFLSDIGLWQFFREAYFCAVLSLTLNTAAYSSEI 114

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+  VP G++EAA A G++     R +++P A+R   P  T++ + LL+ SSL   +
Sbjct: 115 FRGGIEGVPFGEIEAARACGMSGILLYRRIIMPAALRIAWPAYTNEVVFLLQASSLVSII 174

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              D+  V   +  ++    E+ +    IYL L   +     R+  KI
Sbjct: 175 TLMDITGVARVVSARSFAFYELFITAAVIYLILVYGLIFVFKRIERKI 222


>gi|254465169|ref|ZP_05078580.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacterales bacterium Y4I]
 gi|206686077|gb|EDZ46559.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacterales bacterium Y4I]
          Length = 244

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 67/123 (54%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  + A+  EI+R G++ VPRG++EAA A+G++   A R V+ P A R   P L ++
Sbjct: 102 LAFALNSTAYQTEILRGGILGVPRGEIEAAKAIGMSRFTALRRVVFPHAYRIAWPALGNE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K S+LA  V   D++     I ++T     + L    IYL ++ +  L   +   
Sbjct: 162 VILLMKASALASVVTVFDVMGRTRQIFSKTFD-FSVYLWAALIYLCITAVFVLLWRQAER 220

Query: 391 KIA 393
           +++
Sbjct: 221 RLS 223


>gi|13475941|ref|NP_107511.1| amino acid ABC transporter protein, permease protein [Mesorhizobium
           loti MAFF303099]
 gi|14026701|dbj|BAB53297.1| amino acid ABC transporter protein, permease protein [Mesorhizobium
           loti MAFF303099]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 63/123 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AE+VR  + ++ R Q EA IAL L   +  R V+LPQA   ++P   + 
Sbjct: 89  LALGLNVGAYAAEVVRGAVQSIGREQHEACIALNLGRWQGLRHVILPQAFLVMLPTFGNN 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +S+   +  ADL      +  QTG  +      + IY  L+++I+  +  L  
Sbjct: 149 AIELLKATSVVSLISLADLTFQAQVVRAQTGNTMVPFATILVIYFVLALLISWGVRSLER 208

Query: 391 KIA 393
           ++A
Sbjct: 209 RMA 211


>gi|289624564|ref|ZP_06457518.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|330866226|gb|EGH00935.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. aesculi str. 0893_23]
          Length = 225

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    + P  ++    L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|209547515|ref|YP_002279433.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538759|gb|ACI58693.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V +F+ G+       RLSR F  +   AL   YI  F      T + + L
Sbjct: 21  LTVMGSALALVMAFLAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 67

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P         G T++P   +  +AL     A+ AE+VR  + AV R Q EA 
Sbjct: 68  -FWVYFVLP-------FAGLTLTP-LQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEAC 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +AL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+      +  QT
Sbjct: 119 VALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQT 178

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +      + +Y  +++ I+  M  L  ++A
Sbjct: 179 GSTLVPFATILILYFLMALAISAAMRWLERRMA 211


>gi|296106040|ref|YP_003617740.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila 2300/99 Alcoy]
 gi|295647941|gb|ADG23788.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 197

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 67/121 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A    ++A+ AEI+R+G+ ++P+GQ EAA+ L +      + ++LPQ +++I P + ++
Sbjct: 70  VAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPTFYLWKDIILPQVIKNIFPAMINE 129

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  DL+    T+  Q       + I  F Y SL +++     ++  
Sbjct: 130 MIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFYYYSLVLLLEALGKKIEK 189

Query: 391 K 391
           +
Sbjct: 190 R 190


>gi|170698477|ref|ZP_02889549.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170136648|gb|EDT04904.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 229

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 23/174 (13%)

Query: 188 KIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKY 242
           K+ V S    +VL L   A +LS      T +AL   +I TF   LI  +P LVL+ L +
Sbjct: 19  KLAVLSLAASLVLGLAGAAAKLS------TNRALS--WIGTFYTTLIRAVPDLVLMLLLF 70

Query: 243 Q-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
                 L+     LG         + P F++  I L     A+  E  R   +AVPRGQ+
Sbjct: 71  YGIQILLNMATDALGWDQI----DIDP-FVAGVITLGFIYGAYFTETFRGAFLAVPRGQL 125

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           EA  A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V 
Sbjct: 126 EAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179


>gi|186686345|ref|YP_001869541.1| polar amino acid ABC transporter inner membrane subunit [Nostoc
           punctiforme PCC 73102]
 gi|186468797|gb|ACC84598.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc
           punctiforme PCC 73102]
          Length = 496

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 52/74 (70%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++E +R G+ AV +GQ EAA+++G+ +      V+LPQA+++I+P L ++ + LLK
Sbjct: 377 SGAYMSETIRGGIQAVDKGQSEAAMSMGVPYWLMMWDVILPQALKNILPALVNETIGLLK 436

Query: 337 NSSLAVAVGFADLV 350
           +S+L   +G  +++
Sbjct: 437 DSALVSTIGVVEIL 450


>gi|225858526|ref|YP_002740036.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|225720933|gb|ACO16787.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
          Length = 226

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV  ADL+ V   +I    +T  A+ ++++ ++ I L +S++ +    RL 
Sbjct: 163 AVALADLMYVAKDLIGLYYETDIALAMLVVAYLIILLPISLVFSWIERRLR 213


>gi|71738063|ref|YP_272588.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558616|gb|AAZ37827.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320322172|gb|EFW78268.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320331823|gb|EFW87761.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330872849|gb|EGH06998.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 215

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMNISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPFEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|194432871|ref|ZP_03065155.1| histidine ABC transporter, permease protein HisQ [Shigella
           dysenteriae 1012]
 gi|194418859|gb|EDX34944.1| histidine ABC transporter, permease protein HisQ [Shigella
           dysenteriae 1012]
 gi|332090124|gb|EGI95223.1| histidine transport system permease protein hisQ [Shigella
           dysenteriae 155-74]
          Length = 228

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQVAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 217



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|313110215|ref|ZP_07796112.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
 gi|310882614|gb|EFQ41208.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
          Length = 231

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 13/145 (8%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F KP L    F  G+          +AL     A+  E+ R  L++ PRG  EA  ALGL
Sbjct: 86  FGKPDLALSPFAAGT----------LALGLCFGAYATEVFRGALLSFPRGHREAGQALGL 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    ++LPQ  R  +P L + YL LLK+++L   +   +++       N T +   
Sbjct: 136 SPGRIFWRIVLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFT 195

Query: 366 IILIWMFIYLSLS--IMIAL-FMNR 387
             +    IYLSL+  IM+AL F+ R
Sbjct: 196 FYMTAAAIYLSLTVVIMVALHFLER 220


>gi|107022812|ref|YP_621139.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|105893001|gb|ABF76166.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 255

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 67/122 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A++A I+R  +  VP G++EA  A G+T  +  R ++ P+A R  +P LT +
Sbjct: 106 VALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTRTQVLRRIVGPRAWRLALPALTGE 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++ LA  V   D++    T+  +T +  E +     +Y+ L  ++ +   RL  
Sbjct: 166 AILLLKSTVLASTVTVFDVMGTANTLRFETLRVYEPLAGAAIVYVVLVALLTIPAARLEQ 225

Query: 391 KI 392
           +I
Sbjct: 226 RI 227


>gi|732703|emb|CAA57062.1| gluC [Corynebacterium glutamicum]
          Length = 225

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 46/73 (63%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+ F+AE +RSG+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +  + L 
Sbjct: 107 YTSTFVAESLRSGINTVHFGQAEAARSLGLGFGATFRSIIFPQAVRAAIVPLGNTLIALT 166

Query: 336 KNSSLAVAVGFAD 348
           KN+++A  +G  +
Sbjct: 167 KNTTIASVIGVGE 179


>gi|32265845|ref|NP_859877.1| hypothetical protein HH0346 [Helicobacter hepaticus ATCC 51449]
 gi|32261894|gb|AAP76943.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 202

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 51/91 (56%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  S +  A + ++VR  + ++P+ Q E+  ALGL   +    ++LPQA+R ++P +
Sbjct: 73  SAIIVFSLWGVAEVGDLVRGAITSLPKHQSESGKALGLQQWQIMCYIILPQALRRLLPSI 132

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            S    ++K +SL   +G  DL+ VG  II 
Sbjct: 133 ISLSTRMIKTTSLVALLGAVDLLKVGQQIIE 163


>gi|308071224|ref|YP_003872829.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
 gi|305860503|gb|ADM72291.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
          Length = 225

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 17/164 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LGI++ L  T  SR       + +  LY+ TF I  +P LV +   Y ++F    L   
Sbjct: 38  LLGILMGLLRTLKSRPI-----RFVLKLYLETFRI--IPILVWL---YVVYFGFTPLLNV 87

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N      +S E  ++ I  S + AA I +IVR  L ++P+ Q+E+  ALGLT+ +  R V
Sbjct: 88  N------ISGELTAI-IVFSLWGAAEIGDIVRGALESLPKHQVESGQALGLTYGQLYRHV 140

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           L+PQA+R ++P   +    ++K +SL V +G  ++V VG  II 
Sbjct: 141 LIPQAVRRMLPGSINLATRMIKTTSLVVLIGVVEVVKVGQQIIE 184


>gi|257481838|ref|ZP_05635879.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289624457|ref|ZP_06457411.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|298485185|ref|ZP_07003279.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298160297|gb|EFI01324.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330866607|gb|EGH01316.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330886063|gb|EGH19964.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330986785|gb|EGH84888.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009473|gb|EGH89529.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 215

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 61/102 (59%), Gaps = 1/102 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMNISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPFEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           A+R  + P     + ++K +++   +GF +L   G  + N T
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT 179


>gi|297584865|ref|YP_003700645.1| polar amino acid ABC transporter inner membrane subunit [Bacillus
           selenitireducens MLS10]
 gi|297143322|gb|ADI00080.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           selenitireducens MLS10]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 61/110 (55%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ ++ +GQ EA  ++G+   +  R ++ PQA + +IPPL +Q++  LK++S+  
Sbjct: 112 EIVRGGVESIDKGQFEAGRSMGMNGTQTMRYIIWPQAFKRMIPPLGNQFIISLKDTSIFA 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   ++  +    ++ TG      ++    YL ++I   L + R+  ++
Sbjct: 172 IISLNEVTYLMRQYVSSTGDPFVPYIMLSMAYLVITIPSMLILRRIERRL 221



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 30/50 (60%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           IIG+LVG  RLS +K++  I  VY+E  R  P LV   FLY +V  V  I
Sbjct: 41  IIGSLVGLARLSKSKILYAIATVYIETIRGTPILVQALFLYFAVSDVFNI 90


>gi|84393753|ref|ZP_00992501.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84375615|gb|EAP92514.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 225

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++  K  R ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSTPKTYRRIILPSALRRALPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            S++A  V   DL      + ++     E  L     Y+ L+ I+IA+F
Sbjct: 162 GSAVAGIVTIMDLTGAARLVNSRYYAPFESFLTAGLFYMGLTFIIIAIF 210


>gi|50121971|ref|YP_051138.1| histidine ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612497|emb|CAG75947.1| histidine ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 238

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA  V   D++ +   I   T Q      I   IYL++S ++I +F
Sbjct: 167 VILMLHSTALAFTVTVPDILKIARDINAATYQPFYAFGIAAVIYLAISFVLIGMF 221


>gi|15891574|ref|NP_357246.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15160006|gb|AAK90031.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 260

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +A  L Y+  F     P LVLI A  Y   F+    G  N+I      P+++   + L+ 
Sbjct: 86  RAPALTYVQIFR--NAPHLVLIFAATYIFPFEIVAFG--NYIP----FPDWIKAVVGLAI 137

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +A IAEI R  + ++P  Q EAA  LG +  +  R ++LPQ ++  +PP  + Y ++ 
Sbjct: 138 PASAHIAEITRGAIQSIPTAQWEAAQGLGFSRNQTLRWIILPQCVKRSLPPWMNLYSSIT 197

Query: 336 KNSSLAVAVGFADLVSV---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++LA  VG  +L+       T + +    + + L  +  +      ++ F  RL  + 
Sbjct: 198 MGTALASLVGVHELLHAATDASTAVQRNDFTVVVYLTVLMAFFLFCYPVSRFTQRLERRF 257

Query: 393 ALK 395
           A +
Sbjct: 258 ASR 260


>gi|325289250|ref|YP_004265431.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324964651|gb|ADY55430.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 239

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 10/190 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I V S  LG++L L    L R +       +  +Y+S   I G P LV +   Y   +  
Sbjct: 26  IAVVSMFLGMILGLLIA-LCRIYKVPVLSKIAAVYVS--FIRGTPILVQL---YVFFYGT 79

Query: 249 PV-LGQFNFIGGSTVSPEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALG 304
           P+ LG  N         E   L  AL  YT   +A+ +E +RS L ++  GQ+EAA ++G
Sbjct: 80  PIALGFLNREFAGIFPDEIPPLACALLAYTINASAYHSEYIRSALNSIDSGQIEAAYSVG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    V+LPQA+   +P   + ++ L+K S++  A+   ++++V   I ++  + +
Sbjct: 140 LTTAQGICRVILPQALIIALPNFVNVFIGLIKGSAVVFAIKVVEIMAVAKIIASEGYRFL 199

Query: 365 EIILIWMFIY 374
           E+      IY
Sbjct: 200 EMYFDAAIIY 209


>gi|322376964|ref|ZP_08051457.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282771|gb|EFX59778.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 226

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL AV + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAVSQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV  ADL+ V   +I    +T  A+ +++I ++ + L +S++ +    RL 
Sbjct: 163 AVALADLMYVAKDLIGLYYETDIALAMLVIAYLIMLLPISLVFSWIERRLR 213


>gi|222081148|ref|YP_002540511.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725827|gb|ACM28916.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 234

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 67/111 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++   AA+  EI+R+G+ AV + Q+EA  ALG T  +  R V++  A+  + P L SQ
Sbjct: 95  IGMTINLAAYSTEIIRAGIEAVHKSQIEAGEALGFTRFQIYRHVIIVPAVAKVYPALCSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++ ++  SS+  A+   +L +    + +QT ++ E+ ++   +YL+L++++
Sbjct: 155 FVLMMLASSICSAISTHELAASAAFVESQTYRSFEVYIVVTLMYLALALVL 205


>gi|193083902|gb|ACF09581.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote KM3-72-G3]
          Length = 564

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 48/78 (61%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + + M + +    +   +IAE++R GL AV  GQ EAA+ALGL+  +    V LP A+R+
Sbjct: 420 AEDIMRMLLMFGIFGGCYIAEVLRGGLQAVDSGQKEAALALGLSPFQTKMQVELPNAVRT 479

Query: 323 IIPPLTSQYLNLLKNSSL 340
            +P + S ++ L K+++L
Sbjct: 480 TLPSIVSVFIGLWKDTTL 497


>gi|161524853|ref|YP_001579865.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189350397|ref|YP_001946025.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221213037|ref|ZP_03586013.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD1]
 gi|160342282|gb|ABX15368.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189334419|dbj|BAG43489.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221167250|gb|EED99720.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD1]
          Length = 230

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 25/233 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSR---HFHEKTGKALPLL---YI 224
           S P L        K  V S V G    +VL++   R       F      AL  L   Y+
Sbjct: 10  SLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAWLARAYV 69

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 70  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     +I  T Q + + L    IY  L  ++         +++L  +
Sbjct: 177 TVTELLRSAQEMIAATYQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPAR 229


>gi|27367226|ref|NP_762753.1| arginine transporter permease subunit ArtM [Vibrio vulnificus
           CMCP6]
 gi|27358794|gb|AAO07743.1| Arginine ABC transporter, permease protein ArtM [Vibrio vulnificus
           CMCP6]
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF+ I  S V      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLIYY----GP--GQFDAIRDSFVWQWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++  T  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKLVTLKVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKK 215


>gi|319942092|ref|ZP_08016411.1| hypothetical protein HMPREF9464_01630 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804476|gb|EFW01354.1| hypothetical protein HMPREF9464_01630 [Sutterella wadsworthensis
           3_1_45B]
          Length = 220

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 24/173 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP +                       G  +S E+ ++ I L+    +
Sbjct: 65  PLLVQLFFLYFGLPKV-----------------------GIRISGEWCAI-IGLAFIGGS 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R+GL +V   Q E+A  LGLT  +   LV+LPQA    +PPL +  + L+K  S
Sbjct: 101 YMAEALRAGLESVSTVQTESARVLGLTPFQTMMLVVLPQAFAVSVPPLVANIIFLIKEIS 160

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  A+   DL+ V   +I  + +  E +++ +  Y+ L + I+L    L  K+
Sbjct: 161 VVSAIALPDLMYVTKDLIGNSYKTDESLILLVSAYVVLLLPISLLGYWLEKKV 213


>gi|221197836|ref|ZP_03570882.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD2M]
 gi|221204606|ref|ZP_03577623.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD2]
 gi|221175463|gb|EEE07893.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD2]
 gi|221181768|gb|EEE14169.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD2M]
          Length = 230

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 25/233 (10%)

Query: 177 SFPTLTMDT--NAKIFVFSFVLG----IVLSLFATRLSR---HFHEKTGKALPLL---YI 224
           S P L        K  V S V G    +VL++   R       F      AL  L   Y+
Sbjct: 10  SLPVLAQGAVLTVKFAVLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAWLARAYV 69

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+ G P LV I   + +++  P LG        ++ P    + IALS   AA+++E 
Sbjct: 70  S--LMRGTPLLVQI---FVIYYGLPSLG-------ISLDPTPAGV-IALSANVAAYMSES 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 117 MRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     +I  T Q + + L    IY  L  ++         +++L  +
Sbjct: 177 TVTELLRSAQEMIAATYQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPTR 229


>gi|304395806|ref|ZP_07377689.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357100|gb|EFM21464.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 239

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 14/182 (7%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVL----GQFNFIG 258
           A +LS H      +A+  L  S  +IF G+P L++I   Y  +F    L    GQ     
Sbjct: 43  AAKLSPH------RAVRWLGESYSVIFRGIPELLVI---YLFYFGGSGLITQIGQLFGAD 93

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   +P F+   +A+   + ++ AE+ R+  +A+ +G++EAA+A+G+   +  + +LLPQ
Sbjct: 94  GFIEAPPFLIGALAIGLISGSYQAEVYRAARLALAKGEIEAAVAIGMPRWRIRQRILLPQ 153

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             R  +P L++ +   LK+S+L    G  +L+         T       L+    YL L+
Sbjct: 154 VARYALPGLSNVWQMSLKDSALVSVTGIVELMRASQIAAGSTRDYFSFYLVGGACYLLLT 213

Query: 379 IM 380
           ++
Sbjct: 214 LL 215



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 29/49 (59%)

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           F  ++   ++G+ V A +LS ++ V W+   Y  +FR IP L+VI+  Y
Sbjct: 28  FCALLVGAVVGSGVAAAKLSPHRAVRWLGESYSVIFRGIPELLVIYLFY 76


>gi|260222556|emb|CBA32235.1| hypothetical protein Csp_D31120 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 191

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 11/119 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV + L Y        LG F    G   SP +++  + L+ Y +AF+ EI R  + 
Sbjct: 62  GVPLLVQLFLAYY------GLGLF----GINTSP-WVAAGMGLTLYASAFLTEIWRGSVE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++PRGQ EA+ +L L   +  R ++LPQA +  + P     + ++K ++LA  +GF +L
Sbjct: 111 SIPRGQWEASQSLALNFAEQLRYIILPQAFKISVAPTVGFLVQVIKGTALASVIGFMEL 169


>gi|218682668|ref|ZP_03530269.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  +  +A+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I
Sbjct: 88  PELTAANLAMVINLGAYSCEIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRI 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            P L+SQ + ++  SS+   +   DL      I ++T +A E  ++   IYL ++I++
Sbjct: 148 WPALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVMAILL 205


>gi|205353468|ref|YP_002227269.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205273249|emb|CAR38212.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628560|gb|EGE34903.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 228

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L     V+     I    + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G TH +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178


>gi|71734118|ref|YP_275674.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298488143|ref|ZP_07006180.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71554671|gb|AAZ33882.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157422|gb|EFH98505.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320323222|gb|EFW79310.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320329747|gb|EFW85736.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330881452|gb|EGH15601.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330889203|gb|EGH21864.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. mori str. 301020]
 gi|330960459|gb|EGH60719.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. maculicola str. ES4326]
 gi|330988692|gb|EGH86795.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. lachrymans str. M301315]
          Length = 229

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    + P  ++    L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|317492651|ref|ZP_07951078.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919401|gb|EFV40733.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 228

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI G+P LVL+      L+  L+    +LG  QFN      + P  ++  I L     
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQMVLNQITDLLGWSQFN------IDP-LVAGVITLGFIYG 105

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVP+GQ+EAA +LG +  K  R +L P  MR  +P + + +  +LK +
Sbjct: 106 AYFTETFRGAFMAVPKGQIEAATSLGFSASKIFRRILFPAMMRYALPGIGNNWQVILKAT 165

Query: 339 SLAVAVGFADLV 350
           +L   +G  DLV
Sbjct: 166 ALVSLLGLDDLV 177


>gi|301155144|emb|CBW14608.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 67/121 (55%), Gaps = 5/121 (4%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+A ALGLT  +    +LLPQ+++ + P   + +  ++
Sbjct: 99  WGTAEMGDLVRGALTSIEKHQVESAYALGLTPFQTFVYILLPQSLKRVTPSAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNA 390
           K SSLA+ +G  +++ VG  II  +  + +   +W++     +Y  +   ++LF   L  
Sbjct: 159 KTSSLAMLIGVVEVIKVGQQIIEHSLFSNQSAALWIYGVIFGLYFVICYPLSLFSRYLET 218

Query: 391 K 391
           +
Sbjct: 219 R 219


>gi|168229728|ref|ZP_02654786.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194473000|ref|ZP_03078984.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197249262|ref|YP_002147313.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|194459364|gb|EDX48203.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197212965|gb|ACH50362.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|205335765|gb|EDZ22529.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 228

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L     V+     I    + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G TH +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178


>gi|153010819|ref|YP_001372033.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562707|gb|ABS16204.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 218

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 69/129 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L  + A + ++I R+ ++ V  GQ E A +LG  + +  R +++PQA+R+ 
Sbjct: 86  PAVWTGIIGLGLHFAVYNSDIFRTAILTVDPGQNEGARSLGFGNGQTLRYIIVPQAVRNA 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P + +  + LLK+++L   +G  +LV      I++T    E  +    I+  L++++  
Sbjct: 146 LPQVGNNLIALLKDTALVSVIGITELVHASQQAISETYSPFEFYITAAVIFYVLNLILEA 205

Query: 384 FMNRLNAKI 392
            ++ +  K+
Sbjct: 206 GLHWMEKKV 214


>gi|237799096|ref|ZP_04587557.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331021950|gb|EGI02007.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 229

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    + P  ++    L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|209547541|ref|YP_002279459.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538785|gb|ACI58719.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 66/118 (55%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  +  +A+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I
Sbjct: 88  PELTAANLAMVINLGAYSCEIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRI 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            P L+SQ + ++  SS+   +   DL      I ++T +A E  ++   IYL ++I++
Sbjct: 148 WPALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVMAILL 205


>gi|288905473|ref|YP_003430695.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|288732199|emb|CBI13764.1| putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
          Length = 226

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 50/84 (59%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           YI     T   ++EI+RS ++ V +GQ+E A A+GL+  +A   ++ PQA+R  +P L +
Sbjct: 101 YIIFGLMTTGSLSEIIRSAILTVDKGQLEVAQAIGLSTSQAYIRIVFPQAIRQALPNLCN 160

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
             +NL+K +SL   +   D+ ++ 
Sbjct: 161 LVINLVKGTSLVFVMTVKDITAIA 184


>gi|270261833|ref|ZP_06190105.1| transporter [Serratia odorifera 4Rx13]
 gi|270043709|gb|EFA16801.1| transporter [Serratia odorifera 4Rx13]
          Length = 230

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A+     A+  E  R   + V RGQ+EAA+A G+   +  R VLLPQ +   IP
Sbjct: 93  FISGVLAIGFVFGAYYTETFRGAFLTVERGQLEAAMAYGMRPGQVFRRVLLPQMLSFAIP 152

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + + +L L+K S+L   +G  D+V     +  Q G+A +
Sbjct: 153 GINNNWLGLMKASALVSILGLEDMV----WLAEQAGRATQ 188


>gi|315635240|ref|ZP_07890517.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315475986|gb|EFU66741.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 67/121 (55%), Gaps = 5/121 (4%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+A ALGLT  +    +LLPQ+++ + P   + +  ++
Sbjct: 99  WGTAEMGDLVRGALTSIEKHQVESAYALGLTPFQTFVYILLPQSLKRVTPSAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNA 390
           K SSLA+ +G  +++ VG  II  +  + +   +W++     +Y  +   ++LF   L  
Sbjct: 159 KTSSLAMLIGVVEVIKVGQQIIEHSLFSNQSAALWIYGVIFGLYFVICYPLSLFSRYLET 218

Query: 391 K 391
           +
Sbjct: 219 R 219


>gi|228478439|ref|ZP_04063043.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|312862893|ref|ZP_07723133.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus vestibularis F0396]
 gi|228249797|gb|EEK09084.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|311101753|gb|EFQ59956.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus vestibularis F0396]
          Length = 216

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEI+R GL ++  GQ EA ++ G  +++    ++ PQA+R ++P + SQ+
Sbjct: 87  SFTVFTSAALAEIIRGGLNSIDHGQTEAGLSQGFNNKQIFIYIIFPQAIRKMLPSIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 147 VTVIKDTSFLYSV 159



 Score = 43.1 bits (100), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T +L+F  ++ +T+ GT++   R   N ++ WI  +YVE  RN+P L+ IF ++
Sbjct: 16  GMWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYVEFVRNVPNLLWIFIIF 73


>gi|190150673|ref|YP_001969198.1| arginine transporter permease ArtQ [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264021|ref|ZP_07545621.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915804|gb|ACE62056.1| arginine transport system permease protein ArtQ [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306870632|gb|EFN02376.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 68/127 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E++ ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESSAALGLSRAHTFLRIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|171321440|ref|ZP_02910388.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171093286|gb|EDT38486.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 229

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 13/139 (9%)

Query: 221 LLYISTF---LIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           L +I TF   LI  +P LVL+ L +      L+     LG         + P F++  I 
Sbjct: 46  LRWIGTFYTTLIRAVPDLVLMLLLFYGIQILLNMATDALGWDQI----DIDP-FVAGVIT 100

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + + 
Sbjct: 101 LGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQ 160

Query: 333 NLLKNSSLAVAVGFADLVS 351
            L+K ++L   +G AD+V 
Sbjct: 161 VLVKATALVSIIGLADVVK 179


>gi|157151057|ref|YP_001450274.1| amino acid permease protein SP0711 [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157075851|gb|ABV10534.1| amino acid ABC transporter, permease protein SP0711 [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 226

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 40/177 (22%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+V+S+      RH+           + +  +  PLL    FL FGLP + L+   
Sbjct: 31  SFLLGLVVSII-----RHYRVPILRQIATVYIELSRNTPLLIQLFFLYFGLPRIGLV--- 82

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L  +        F+GGS                   ++AE  RSGL AV + Q E  +
Sbjct: 83  --LSSEACATIGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEIGL 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           ++GLT R+  R V+LPQA    +P  ++  + L+K +S+   V  ADL+ V   +I 
Sbjct: 122 SIGLTPRQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSVVALADLMYVAKDLIG 178


>gi|150395401|ref|YP_001325868.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150026916|gb|ABR59033.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 241

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 14/186 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFD--KPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           LL   T ++  +P LVLI L Y    D    VLG F  IG   +S     +++ +     
Sbjct: 62  LLECYTTVVRAVPELVLILLLYYAGTDLLNQVLGAFG-IGTVDISGLMAGIFV-IGVVQG 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  + AVP GQ+EAA A G++     R + LP  +   IP L + +L   K++
Sbjct: 120 AYSTEVLRGAIKAVPAGQIEAARAYGMSPFMVLRRITLPAMLPYAIPGLANLWLIATKDT 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF----IYLSLSIMIALFMNRL--NAKI 392
           +L   VGF++L      +  Q   A +  L++      +YL+L+++  +F+  L  +A+ 
Sbjct: 180 ALLAVVGFSELT----LVTRQAAGATKAYLLFFCAAGALYLALTLVSNVFIGMLERHARR 235

Query: 393 ALKEKK 398
              E++
Sbjct: 236 GFAEQR 241


>gi|16761278|ref|NP_456895.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765680|ref|NP_461295.1| histidine/lysine/arginine/ornithine transport protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29141026|ref|NP_804368.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56412750|ref|YP_149825.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62180924|ref|YP_217341.1| lysine/arginine/ornithine ABC transporter [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161612914|ref|YP_001586879.1| hypothetical protein SPAB_00620 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549642|ref|ZP_02343401.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167993040|ref|ZP_02574135.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237377|ref|ZP_02662435.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242477|ref|ZP_02667409.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261625|ref|ZP_02683598.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465938|ref|ZP_02699808.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194445801|ref|YP_002041616.1| histidine ABC transporter permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450619|ref|YP_002046408.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194736324|ref|YP_002115423.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197264105|ref|ZP_03164179.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197361684|ref|YP_002141320.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198243854|ref|YP_002216425.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388297|ref|ZP_03214909.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204928994|ref|ZP_03220137.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|207857771|ref|YP_002244422.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213426991|ref|ZP_03359741.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213581828|ref|ZP_03363654.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213612823|ref|ZP_03370649.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213649621|ref|ZP_03379674.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213852675|ref|ZP_03382207.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|224583159|ref|YP_002636957.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238912367|ref|ZP_04656204.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289827474|ref|ZP_06546086.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|61225733|sp|P0A2I9|HISQ_SALTY RecName: Full=Histidine transport system permease protein hisQ
 gi|61225734|sp|P0A2J0|HISQ_SALTI RecName: Full=Histidine transport system permease protein hisQ
 gi|25296629|pir||AG0800 histidine transport system permease protein STY2583 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|47732|emb|CAA24660.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|154126|gb|AAA75579.1| Q protein [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420895|gb|AAL21254.1| histidine and lysine/arginine/ornithine transport system
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|16503577|emb|CAD07585.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29136651|gb|AAO68217.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56127007|gb|AAV76513.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62128557|gb|AAX66260.1| ABC superfamily (membrane),histidine and lysine/arginine/ornithine
           transport system [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161362278|gb|ABX66046.1| hypothetical protein SPAB_00620 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404464|gb|ACF64686.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194408923|gb|ACF69142.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194711826|gb|ACF91047.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631271|gb|EDX49831.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197093160|emb|CAR58604.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|197242360|gb|EDY24980.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289601|gb|EDY28964.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197938370|gb|ACH75703.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199605395|gb|EDZ03940.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321538|gb|EDZ06737.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205325459|gb|EDZ13298.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205328791|gb|EDZ15555.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205338316|gb|EDZ25080.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205349591|gb|EDZ36222.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709574|emb|CAR33919.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|224467686|gb|ACN45516.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|261247559|emb|CBG25386.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267994453|gb|ACY89338.1| histidine/lysine/arginine/ornithine transport protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158911|emb|CBW18424.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312913344|dbj|BAJ37318.1| histidine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321222946|gb|EFX48017.1| Histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322617098|gb|EFY14004.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322617596|gb|EFY14495.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322624774|gb|EFY21603.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322630324|gb|EFY27094.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322634504|gb|EFY31237.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322639215|gb|EFY35907.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322640078|gb|EFY36745.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322645702|gb|EFY42226.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652066|gb|EFY48429.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656238|gb|EFY52535.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659390|gb|EFY55637.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322665850|gb|EFY62033.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669911|gb|EFY66052.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673896|gb|EFY69993.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322678655|gb|EFY74711.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322683550|gb|EFY79564.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322687625|gb|EFY83595.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322715402|gb|EFZ06973.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323130684|gb|ADX18114.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323193540|gb|EFZ78745.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323198447|gb|EFZ83549.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204559|gb|EFZ89562.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208503|gb|EFZ93442.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323213641|gb|EFZ98430.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323218324|gb|EGA03034.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222921|gb|EGA07270.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224504|gb|EGA08786.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323232319|gb|EGA16422.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323235647|gb|EGA19731.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323241193|gb|EGA25229.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244935|gb|EGA28937.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323250054|gb|EGA33948.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323253838|gb|EGA37663.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323254975|gb|EGA38766.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323259838|gb|EGA43470.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264141|gb|EGA47648.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323270839|gb|EGA54277.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326624177|gb|EGE30522.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|223501|prf||0809313C protein hisQ
          Length = 228

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L     V+     I    + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G TH +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178


>gi|325576797|ref|ZP_08147412.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161003|gb|EGC73121.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 67/121 (55%), Gaps = 5/121 (4%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+A ALGLT  +    +LLPQ+++ + P   + +  ++
Sbjct: 99  WGTAEMGDLVRGALTSIEKHQVESAYALGLTPFQTFVYILLPQSLKRVTPSAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNA 390
           K SSLA+ +G  +++ VG  II  +  + +   +W++     +Y  +   ++LF   L  
Sbjct: 159 KTSSLAMLIGVVEVIKVGQQIIEHSLFSNQSAALWIYSVIFGLYFVICYPLSLFSRYLET 218

Query: 391 K 391
           +
Sbjct: 219 R 219


>gi|320159034|ref|YP_004191412.1| arginine ABC transporterpermease ArtM [Vibrio vulnificus MO6-24/O]
 gi|319934346|gb|ADV89209.1| arginine ABC transporter, permease protein ArtM [Vibrio vulnificus
           MO6-24/O]
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF+ I  S V      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLIYY----GP--GQFDAIRDSFVWQWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++  T  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKFVTLKVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKK 215


>gi|294670248|ref|ZP_06735141.1| amino acid ABC transporter, permease protein [Neisseria elongata
           subsp. glycolytica ATCC 29315]
 gi|291307985|gb|EFE49228.1| amino acid ABC transporter, permease protein [Neisseria elongata
           subsp. glycolytica ATCC 29315]
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +A+GL+  +  R + LPQ++R ++P   + +  ++
Sbjct: 99  WGVAEMGDLVRGALESIEKHQVESGLAIGLSRWQVFRFIELPQSVRRVLPGSINLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLAALIGVIEVVKVGQQIIENS 183


>gi|56696191|ref|YP_166548.1| ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56677928|gb|AAV94594.1| ABC transporter, permease protein, HisMQ family [Ruegeria pomeroyi
           DSS-3]
          Length = 295

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 10/126 (7%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++R G+ AVP  Q+E A A G++ R+    +L+PQ     +P L++ +L L+K 
Sbjct: 153 GAFAANVLRGGMRAVPHAQLETAAAYGMSRRQTFWRILVPQMWIYALPGLSNLWLILIKA 212

Query: 338 SSLAVAVGFADLV----SVGGTIINQ-TGQAIEIILIWMFI-----YLSLSIMIALFMNR 387
           + L   +G  D+V     +GGT  +Q T        +W F+     YLS + +  + + R
Sbjct: 213 TPLLFLLGIEDIVYWAREIGGTKTSQFTDYPHGDWRMWYFLFLLVFYLSFTRISEILLER 272

Query: 388 LNAKIA 393
           L  +++
Sbjct: 273 LTVRLS 278


>gi|307138973|ref|ZP_07498329.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli H736]
 gi|331642947|ref|ZP_08344082.1| histidine transport system permease protein HisQ [Escherichia coli
           H736]
 gi|331039745|gb|EGI11965.1| histidine transport system permease protein HisQ [Escherichia coli
           H736]
          Length = 228

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPSMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +V  G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIVAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|307637630|gb|ADN80080.1| Putative ABC-type amino-acid transporter [Helicobacter pylori 908]
 gi|325996224|gb|ADZ51629.1| Putative ABC-type amino-acid transporter permease protein
           [Helicobacter pylori 2018]
 gi|325997818|gb|ADZ50026.1| Putative amino-acid ABC transporter permease protein [Helicobacter
           pylori 2017]
          Length = 240

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 13/200 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   ++ IV++L      +HF  K   A    Y+S  LI G P LV I + +   +  P
Sbjct: 50  FILGLLIAIVVALIKIAPPKHFMHKALLAGVNFYVS--LIRGTPLLVQIVVVF---YGLP 104

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL + +
Sbjct: 105 ALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLNYLQ 156

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I L 
Sbjct: 157 TFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPIYLE 216

Query: 370 WMFIYLSLSIMIALFMNRLN 389
              IY    +++ +   R+ 
Sbjct: 217 AALIYWLFCLVLEVIQKRVE 236


>gi|289651582|ref|ZP_06482925.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 215

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 70/122 (57%), Gaps = 4/122 (3%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQ
Sbjct: 79  GMNISP-WAAAALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPFEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  + P     + ++K +++   +GF +L   G  + N T    E  +++ F+ L   
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT---FEPFMVYGFVALGYF 194

Query: 379 IM 380
           I+
Sbjct: 195 IL 196


>gi|261253293|ref|ZP_05945866.1| histidine ABC transporter permease protein HisM [Vibrio orientalis
           CIP 102891]
 gi|260936684|gb|EEX92673.1| histidine ABC transporter permease protein HisM [Vibrio orientalis
           CIP 102891]
          Length = 225

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 59/105 (56%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++  K  R ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSTFKTYRRIILPSALRRALPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ +I
Sbjct: 162 GSAVAGIVTIVDLTGAARLVNSRYYAPFESFLTAGLFYMALTFII 206


>gi|237740704|ref|ZP_04571185.1| amino acid permease [Fusobacterium sp. 2_1_31]
 gi|229422721|gb|EEO37768.1| amino acid permease [Fusobacterium sp. 2_1_31]
          Length = 226

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SPE  S  I  + +  A + ++VR  + ++P+ Q+E+A AL L  ++    V++PQ
Sbjct: 86  GVHISPE-ASAIIVFTIWGTAEMGDLVRGAIESIPKIQIESATALALDKKQIYLYVIIPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +R +IP   +    ++K +SL V +G  +++ VG  II+
Sbjct: 145 IIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQIID 184


>gi|171059884|ref|YP_001792233.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170777329|gb|ACB35468.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 225

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP+L                       G  +SPE  S+ IA+     A+  EIVR
Sbjct: 74  FIFFGLPSL-----------------------GLRLSPEVSSV-IAMVVNLGAYAGEIVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+   PRGQ+EAA +L L   +    V+LP ++  + P L SQ + ++  S++   +  
Sbjct: 110 AGIEGTPRGQIEAARSLALDEAQVFIRVVLPPSLGRVWPALVSQIVIVMLGSAVCGQISA 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I ++  +A E  LI   IYL L+I +   +N L  +
Sbjct: 170 QELSYAANLIQSRNFRAFEAYLIAAGIYLLLAIGVRQALNWLGPR 214


>gi|55821558|ref|YP_140000.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823486|ref|YP_141927.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55737543|gb|AAV61185.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739471|gb|AAV63112.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
 gi|312278895|gb|ADQ63552.1| Amino acid (Glutamine) ABC transporter permease protein
           [Streptococcus thermophilus ND03]
          Length = 226

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 36/208 (17%)

Query: 193 SFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           SF+LG+V+S+         ++LS  + E + +  P L    FL FGLP + L+     L 
Sbjct: 31  SFLLGLVVSVIRHYRVPILSQLSTAYIELS-RNTPFLIQLFFLYFGLPRIGLV-----LS 84

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            +   +    F+GGS                   ++AE  RSGL AV + Q E  +++GL
Sbjct: 85  SEACAVVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEVGLSIGL 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQ 362
           T  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   ++    +T  
Sbjct: 126 TPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLMGLYYETDV 185

Query: 363 AIEIILI-WMFIYLSLSIMIALFMNRLN 389
           A+ ++++ ++ + L +S++ +    RL 
Sbjct: 186 ALGMLVVAYLLMLLPISLVFSWIERRLR 213


>gi|312862941|ref|ZP_07723181.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus vestibularis F0396]
 gi|311101801|gb|EFQ60004.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus vestibularis F0396]
          Length = 216

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEI+R GL ++  GQ EA ++ G  +++    ++ PQA+R ++P + SQ+
Sbjct: 87  SFTVFTSAALAEIIRGGLNSIDHGQTEAGLSQGFNNKQIFIYIIFPQAIRKMLPSIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 147 VTVIKDTSFLYSV 159



 Score = 42.7 bits (99), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T +L+F  ++ +T+ GT++   R   N ++ WI  +YVE  RN+P L+ IF ++
Sbjct: 16  GVWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYVEFVRNVPNLLWIFIIF 73


>gi|311106206|ref|YP_003979059.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 8 [Achromobacter
           xylosoxidans A8]
 gi|310760895|gb|ADP16344.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 8
           [Achromobacter xylosoxidans A8]
          Length = 269

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ + I L    +A +AEI R  + ++P  Q EAA +L     +  R+++LPQ +R +
Sbjct: 135 PDWIKVVIGLGLPASANVAEIFRGAIQSIPSAQWEAAQSLAFRRSQIFRMIVLPQCLRRM 194

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +P   + Y ++  ++SLA  VG  DLV       N   +    IL+
Sbjct: 195 LPSWMNLYASITMSTSLASLVGVHDLVDAATVASNTVSRTDFTILV 240



 Score = 39.7 bits (91), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 13/96 (13%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++ A+L G      ++   M   T+ G +VGA  LS + L+  + R YV +FRN P LV
Sbjct: 53  QWSPALLRGLAMNIQISVLAMALGTLAGLVVGALSLSPSPLLRRLTRAYVLLFRNAPILV 112

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           +++F              + V PF + L    L FP
Sbjct: 113 LVYF-------------TTYVFPFELRLGGWNLPFP 135


>gi|16130243|ref|NP_416811.1| histidine/lysine/arginine/ornithine transporter permease subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89109128|ref|AP_002908.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. W3110]
 gi|170081924|ref|YP_001731244.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|194436195|ref|ZP_03068297.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           101-1]
 gi|238901483|ref|YP_002927279.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|253772768|ref|YP_003035599.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162317|ref|YP_003045425.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|256022007|ref|ZP_05435872.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia sp. 4_1_40B]
 gi|297520317|ref|ZP_06938703.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli OP50]
 gi|300948543|ref|ZP_07162637.1| arginine/ornithine transport protein [Escherichia coli MS 116-1]
 gi|300956424|ref|ZP_07168715.1| arginine/ornithine transport protein [Escherichia coli MS 175-1]
 gi|301023555|ref|ZP_07187319.1| arginine/ornithine transport protein [Escherichia coli MS 196-1]
 gi|301647589|ref|ZP_07247386.1| arginine/ornithine transport protein [Escherichia coli MS 146-1]
 gi|2507492|sp|P52094|HISQ_ECOLI RecName: Full=Histidine transport system permease protein hisQ
 gi|1788646|gb|AAC75368.1| histidine/lysine/arginine/ornithine transporter permease subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1799689|dbj|BAA16154.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K12 substr. W3110]
 gi|169889759|gb|ACB03466.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|194424923|gb|EDX40908.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           101-1]
 gi|238861422|gb|ACR63420.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|242377941|emb|CAQ32710.1| hisQ, subunit of histidine ABC transporter and
           lysine/arginine/ornithine ABC Transporter [Escherichia
           coli BL21(DE3)]
 gi|253323812|gb|ACT28414.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974218|gb|ACT39889.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|253978385|gb|ACT44055.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BL21(DE3)]
 gi|260448598|gb|ACX39020.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|299880790|gb|EFI89001.1| arginine/ornithine transport protein [Escherichia coli MS 196-1]
 gi|300316773|gb|EFJ66557.1| arginine/ornithine transport protein [Escherichia coli MS 175-1]
 gi|300451953|gb|EFK15573.1| arginine/ornithine transport protein [Escherichia coli MS 116-1]
 gi|301074279|gb|EFK89085.1| arginine/ornithine transport protein [Escherichia coli MS 146-1]
 gi|309702620|emb|CBJ01949.1| histidine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|315136943|dbj|BAJ44102.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli DH1]
 gi|315615577|gb|EFU96209.1| histidine transport system permease protein hisQ [Escherichia coli
           3431]
 gi|323936598|gb|EGB32885.1| inner membrane transport system [Escherichia coli E1520]
 gi|323940995|gb|EGB37182.1| inner membrane transport system [Escherichia coli E482]
 gi|323961381|gb|EGB56992.1| inner membrane transport system [Escherichia coli H489]
 gi|323973108|gb|EGB68301.1| inner membrane transport system [Escherichia coli TA007]
          Length = 228

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPSMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 39.7 bits (91), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|251788997|ref|YP_003003718.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537618|gb|ACT06239.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 229

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+     LG         + P    + I L     A+
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQMALNSVTETLGMDQI----DIDPLAAGI-ITLGFIYGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVPRGQ+EAA+A G +  K  R ++ P  MR  +P + + +  +LK+++L
Sbjct: 108 FTETFRGAYLAVPRGQIEAAVAFGFSPMKVFRRIMFPSMMRFALPGIGNNWQVILKSTAL 167

Query: 341 AVAVGFADLVSV 352
              +G +D++ V
Sbjct: 168 VSLLGLSDVIKV 179


>gi|157369178|ref|YP_001477167.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320942|gb|ABV40039.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 221

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 24/155 (15%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP+L      ++L   +  L               +++ I L  Y+     EI+R
Sbjct: 75  FIVFGLPSL-----GWKLTAGQAAL---------------LAMVINLGAYST----EIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+   P+GQ EA   LGL+  +    ++LP +++ I P L SQ + ++  SS+   V F
Sbjct: 111 AGIQVTPKGQWEAGRVLGLSRSQTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSF 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++T  + E+ L+    YL LSI++
Sbjct: 171 EELTFAANLIQSRTFLSFEVYLVTALFYLLLSILM 205


>gi|17549796|ref|NP_523136.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17432051|emb|CAD18728.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 23/191 (12%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VL   L+ +A+RL           L   Y++T  +  +P L+L+ L +   F  P LG  
Sbjct: 34  VLAGTLAAYASRL----RSLAPACLARSYVAT--VRNVPYLILVYLSF---FGLPKLG-- 82

Query: 255 NFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  V+   M+  +A+ C   YT  +  EI+R+ L +VPRGQ  AA++LG++  +  
Sbjct: 83  -------VAASAMA--VAIGCTALYTGGYFCEILRAALHSVPRGQSGAALSLGMSRWQVQ 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T    EI+    
Sbjct: 134 RYIVGPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYTEILAATA 193

Query: 372 FIYLSLSIMIA 382
            IY   S+++A
Sbjct: 194 AIYWLTSVLLA 204


>gi|315639020|ref|ZP_07894190.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
 gi|315480932|gb|EFU71566.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
          Length = 218

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S + +  + ++VRS L ++P+ Q E+A ALGLT  +A   +++PQA+R + P   + 
Sbjct: 92  IVFSIWGSLEMMDLVRSSLQSIPKHQYESAAALGLTPLQAYIYIIIPQALRRLTPLSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEII--LIWMFIYLSLSIMIALFM 385
              ++K+++ A  +G  +LV VG  II   NQ   A  +I  LI+M +Y  +   ++L+ 
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNQNDFAPFVIYGLIFM-LYFVICYPVSLYA 210

Query: 386 NRLNAK 391
             L  K
Sbjct: 211 KNLEKK 216


>gi|307250612|ref|ZP_07532553.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306857353|gb|EFM89468.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|289650400|ref|ZP_06481743.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
          Length = 229

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    + P  ++    L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRGIAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|262275664|ref|ZP_06053473.1| ABC-type amino acid transport system permease component [Grimontia
           hollisae CIP 101886]
 gi|262219472|gb|EEY70788.1| ABC-type amino acid transport system permease component [Grimontia
           hollisae CIP 101886]
          Length = 221

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 10/90 (11%)

Query: 271 IALSCYTAAFI----------AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           + L  +TA F+          AE+VR G+ AVPRGQ EAA AL + + K    ++LPQA+
Sbjct: 82  LTLDAFTAGFVTVGLNLGSYGAELVRGGIQAVPRGQWEAAKALNMPNHKRMIRIILPQAL 141

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +++P   +  + LLK ++L   +  +DL+
Sbjct: 142 LTMLPAWGNLLIELLKGTALVALISVSDLM 171


>gi|260495456|ref|ZP_05815582.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium sp. 3_1_33]
 gi|260196993|gb|EEW94514.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium sp. 3_1_33]
          Length = 226

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 17/168 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS + GI+  LF             K +  +Y+    I  +P LVL+ + Y        
Sbjct: 34  IFSIIFGILFGLFMV-----IKNPITKIISQIYLQAIRI--MPPLVLLFIAY-------- 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G    I G  +S E  ++ I  + +  A + ++VR  + ++P+ Q+E+AIAL L  ++ 
Sbjct: 79  FG-VTRIYGVHISAEASAITI-FTIWGTAEMGDLVRGSIESIPKSQIESAIALALDKKQI 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              V++PQ +R +IP   +    ++K +SL V +G  +++ VG  II+
Sbjct: 137 YLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQIID 184


>gi|319946730|ref|ZP_08020964.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus australis ATCC 700641]
 gi|319746778|gb|EFV99037.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus australis ATCC 700641]
          Length = 225

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 17/181 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            S +LG +L +  T      H K  + L   Y+    I  +P LVL+ + Y   F     
Sbjct: 35  LSMILGTLLGIVMTS-----HSKVIRLLTRFYLEFIRI--MPQLVLLFIVY---FGLARN 84

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              N  G S       S  I  + +  A + ++VR  + ++P+ Q E+  ALGL+  +  
Sbjct: 85  FNINISGES-------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLSKVQLY 137

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     W+
Sbjct: 138 RYIIIPQVLRRLLPQAINLITRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWI 197

Query: 372 F 372
           +
Sbjct: 198 Y 198


>gi|307261839|ref|ZP_07543503.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868456|gb|EFN00269.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|149189499|ref|ZP_01867783.1| probable glutamine transport system permease protein [Vibrio
           shilonii AK1]
 gi|148836656|gb|EDL53609.1| probable glutamine transport system permease protein [Vibrio
           shilonii AK1]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 4/128 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+  TAAF++ I+ + + AV +GQ+EAA + G++     + ++ PQA+   I PL   
Sbjct: 93  ITLTGNTAAFVSVIIVTAMAAVDKGQIEAARSFGISEMVILKKIITPQALLVAIAPLVGL 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +N L+ +SL   +G  D+  VG  +  +T Q     ++W  I L+   M ++ +++L  
Sbjct: 153 AVNQLQVTSLVSVIGVMDITKVGAILNQRTWQP---FIVWPVIGLTYFAM-SMAISKLGR 208

Query: 391 KIALKEKK 398
           K+ L  +K
Sbjct: 209 KLELYLRK 216


>gi|312278471|gb|ADQ63128.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 216

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 49/73 (67%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           + + +T+A +AEI+R GL ++  GQ EA ++ G  +R+    ++ PQA+R ++P + SQ+
Sbjct: 87  SFTVFTSAALAEIIRGGLNSIDPGQTEAGLSQGFNNRQIFIYIIFPQAIRKMLPSIISQF 146

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 147 VTVVKDTSFLYSV 159



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T +L+F  ++ +T+ GT++   R   N ++ WI  +Y+E  RN+P L+ IF ++
Sbjct: 16  GMWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYIEFVRNVPNLLWIFIIF 73


>gi|153809738|ref|ZP_01962406.1| hypothetical protein RUMOBE_00119 [Ruminococcus obeum ATCC 29174]
 gi|149833916|gb|EDM88996.1| hypothetical protein RUMOBE_00119 [Ruminococcus obeum ATCC 29174]
          Length = 264

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 6/107 (5%)

Query: 249 PVLGQFNFI--GGSTVSPEFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           P++ Q  FI  G + +    MS++ A    +S  T A++AE VR G++++  GQ E A A
Sbjct: 84  PMMAQAMFIYFGSAYLFNINMSMWFAAIFIVSINTGAYMAETVRGGILSIDPGQTEGAKA 143

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +G+TH +    V+LPQA+R+I+P + +  +  +K++ +   +G  +L
Sbjct: 144 IGMTHVQTMINVILPQALRNIMPQIGNNLIINIKDTCVLSIIGTVEL 190


>gi|84385569|ref|ZP_00988600.1| arginine ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84379549|gb|EAP96401.1| arginine ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF++I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDWIRESFLWNWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            + R    A+P GQ EA  ALG+  +  T  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 LLFRGAFNAIPAGQWEACRALGM-DKVTTLKVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKK 215


>gi|330431657|gb|AEC16716.1| arginine transporter permease subunit ArtQ [Gallibacterium anatis
           UMN179]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 70/128 (54%), Gaps = 3/128 (2%)

Query: 265 EFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           EF + +   +AL+   AA+ ++ +R  + A+P GQ E+  ALGL+  +    +++PQ  R
Sbjct: 85  EFSAFWCGSVALAIIFAAYASQSLRGAIQAIPVGQWESGAALGLSRAQTFVRIIMPQVWR 144

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L++Q+L LLK+++L   +G  DL+     +   T Q      I   +YL ++++ 
Sbjct: 145 HALPGLSNQWLVLLKDTALVSLIGVDDLMRQAELVNASTHQPFTWYGIAALLYLVITLIS 204

Query: 382 ALFMNRLN 389
              + +L+
Sbjct: 205 QAGIRKLD 212


>gi|299069941|emb|CBJ41225.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           CMR15]
          Length = 210

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 23/191 (12%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VL   L+ +A+RL           L   Y++T  +  +P L+L+ L +   F  P LG  
Sbjct: 21  VLAGTLAAYASRL----RSLAPACLARSYVAT--VRNVPYLILVYLSF---FGLPKLG-- 69

Query: 255 NFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  V+   M+  +A+ C   YT  +  EI+R+ L +VPRGQ  AA++LG++  +  
Sbjct: 70  -------VAASAMA--VAIGCTALYTGGYFCEILRAALHSVPRGQSGAALSLGMSRWQVQ 120

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T    EI+    
Sbjct: 121 RYIVGPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYTEILAATA 180

Query: 372 FIYLSLSIMIA 382
            IY   S+++A
Sbjct: 181 AIYWLTSVLLA 191


>gi|170734678|ref|YP_001773792.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820716|gb|ACA95297.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 255

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 67/122 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A++A I+R  +  VP G++EA  A G+T  +  R ++ P+A R  +P LT +
Sbjct: 106 VALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTRMQVLRRIVGPRAWRLALPALTGE 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++ LA  V   D++    T+  +T +  E +     +Y+ L  ++ +   RL  
Sbjct: 166 AILLLKSTVLASTVTVFDVMGTANTLRFETLRVYEPLAGAAIVYVVLVALLTIPAARLEQ 225

Query: 391 KI 392
           +I
Sbjct: 226 RI 227


>gi|24113680|ref|NP_708190.1| histidine transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30063734|ref|NP_837905.1| histidine transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110806271|ref|YP_689791.1| histidine transport system permease [Shigella flexneri 5 str. 8401]
 gi|331658391|ref|ZP_08359353.1| histidine transport system permease protein HisQ [Escherichia coli
           TA206]
 gi|24052746|gb|AAN43897.1| histidine transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30041989|gb|AAP17715.1| histidine transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110615819|gb|ABF04486.1| histidine transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|281601749|gb|ADA74733.1| Histidine transport system permease protein [Shigella flexneri
           2002017]
 gi|313651132|gb|EFS15531.1| histidine transport system permease protein hisQ [Shigella flexneri
           2a str. 2457T]
 gi|315298159|gb|EFU57423.1| arginine/ornithine transport protein [Escherichia coli MS 16-3]
 gi|331056639|gb|EGI28648.1| histidine transport system permease protein HisQ [Escherichia coli
           TA206]
          Length = 228

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L     ++ +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNMVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|170754761|ref|YP_001781055.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|169119973|gb|ACA43809.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
          Length = 221

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 57/85 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + +  PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIAFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGT 355
           +++++K S+LA  +G  ++++V  +
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQS 180


>gi|167836762|ref|ZP_02463645.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 219

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 67/128 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+    V+ PQA+R  +P L++ 
Sbjct: 92  IALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLHYVIGPQALRIAVPSLSNS 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     II  T Q + + L    +Y  L  ++         
Sbjct: 152 LISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAGVYWVLCQILEWVQRWYEQ 211

Query: 391 KIALKEKK 398
           ++ L  + 
Sbjct: 212 RLTLPSRH 219


>gi|116686948|ref|YP_840195.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|116652663|gb|ABK13302.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 221

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 67/122 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A++A I+R  +  VP G++EA  A G+T  +  R ++ P+A R  +P LT +
Sbjct: 72  VALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTRTQVLRRIVGPRAWRLALPALTGE 131

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++ LA  V   D++    T+  +T +  E +     +Y+ L  ++ +   RL  
Sbjct: 132 AILLLKSTVLASTVTVFDVMGTANTLRFETLRVYEPLAGAAIVYVVLVALLTIPAARLEQ 191

Query: 391 KI 392
           +I
Sbjct: 192 RI 193


>gi|261379485|ref|ZP_05984058.1| amino acid ABC transporter, permease protein [Neisseria subflava
           NJ9703]
 gi|284797945|gb|EFC53292.1| amino acid ABC transporter, permease protein [Neisseria subflava
           NJ9703]
          Length = 222

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+  +  R + LPQ++R ++P   + +  ++
Sbjct: 99  WGIAEMGDLVRGALESIEKHQVESGLALGLSRGQVFRYIELPQSIRRVLPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|254477906|ref|ZP_05091291.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214028491|gb|EEB69327.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 259

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 6/174 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  QF +I  S + P     +    +AL+   A +  E
Sbjct: 88  IIRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGE 145

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R     V +GQ+EAA + G+      R + LPQA+R+++P L  + +  LK + L   
Sbjct: 146 VMRGAFSGVAKGQLEAAKSFGMPRMTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVAT 205

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   D+ +V   + + T    E +L+   +Y++++ +I L       K+   ++
Sbjct: 206 ITVLDIYAVSSRVRSDTFIVYEPLLLLALVYMAIAGVITLGFRWFENKVPSAQR 259


>gi|126699384|ref|YP_001088281.1| amino acid ABC transporter permease [Clostridium difficile 630]
 gi|254975412|ref|ZP_05271884.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255092799|ref|ZP_05322277.1| amino acid ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
 gi|255100912|ref|ZP_05329889.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|255306802|ref|ZP_05350973.1| amino acid ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
 gi|255314541|ref|ZP_05356124.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255517216|ref|ZP_05384892.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255650322|ref|ZP_05397224.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|260683435|ref|YP_003214720.1| amino acid ABC transporter permease [Clostridium difficile CD196]
 gi|260687031|ref|YP_003218164.1| amino acid ABC transporter permease [Clostridium difficile R20291]
 gi|115250821|emb|CAJ68645.1| ABC-type transport system, aminoacid-family permease [Clostridium
           difficile]
 gi|260209598|emb|CBA63248.1| amino acid ABC transporter, permease protein [Clostridium difficile
           CD196]
 gi|260213047|emb|CBE04401.1| amino acid ABC transporter, permease protein [Clostridium difficile
           R20291]
          Length = 203

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 49/82 (59%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ ++ RGQ EA+  LG       + V+ PQ  + I+ P++++ + L+K+
Sbjct: 86  AAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRVIFPQVFKRILAPISNEVITLVKD 145

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           +SL   +G  D++ +    +N+
Sbjct: 146 TSLVYILGLNDILRISQIAMNR 167


>gi|303253514|ref|ZP_07339653.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248385|ref|ZP_07530408.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302647624|gb|EFL77841.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306855123|gb|EFM87303.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|240947951|ref|ZP_04752378.1| arginine transporter permease subunit ArtQ [Actinobacillus minor
           NM305]
 gi|240297745|gb|EER48204.1| arginine transporter permease subunit ArtQ [Actinobacillus minor
           NM305]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   AA+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFAAYASQSLRGAIQAVPVGQWESGTALGLSRGYTFIHIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALVSLIGVHDLMRQSELINTNEHQPFTWFGLAALIYLAITLVSQVIIRYLEL 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|307246272|ref|ZP_07528353.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306852881|gb|EFM85105.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 223

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|254671932|emb|CBA04286.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha275]
          Length = 190

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 44/67 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL+++
Sbjct: 100 IGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNE 159

Query: 331 YLNLLKN 337
           ++ L K 
Sbjct: 160 FIGLFKK 166


>gi|213162276|ref|ZP_03347986.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 226

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L     V+     I    + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G TH +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178


>gi|165976777|ref|YP_001652370.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|307257419|ref|ZP_07539188.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|165876878|gb|ABY69926.1| arginine transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|306864071|gb|EFM95985.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 223

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|27376791|ref|NP_768320.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27349933|dbj|BAC46945.1| blr1680 [Bradyrhizobium japonicum USDA 110]
          Length = 220

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 7/105 (6%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  +  A I E+ R  L ++P  Q + A ALGL+  +A   V+LPQA R  +PP   Q
Sbjct: 90  IGLGLWGGANIGEVFRGALDSIPHRQEQGARALGLSATEALVFVILPQAFRRALPPYVGQ 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ-----TG--QAIEIIL 368
              L++ S+L   VG +DL+     +I +     TG   AIEI L
Sbjct: 150 LTVLVQASALTSVVGVSDLLGSARQMIERLAYVGTGDSHAIEIYL 194



 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 34/54 (62%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T W++   +I ATI+G L+ A   S      ++ R+YVE+FR +P L+++ F++
Sbjct: 19  TLWISLLTVILATILGLLIAALSQSTLTFARFVGRLYVELFRGVPSLMILLFVF 72


>gi|320196176|gb|EFW70800.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           WV_060327]
          Length = 228

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 217



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +++ IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV+
Sbjct: 5   FSSVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLY 149
           +  ++
Sbjct: 65  MLLIF 69


>gi|307704543|ref|ZP_07641450.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           SK597]
 gi|307621908|gb|EFO00938.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           SK597]
          Length = 226

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL AV + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAVSQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV  ADL+ V   +I    +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 163 AVALADLMYVAKDLIGLYYETDIALTMLVVAYLMMLLPISLVFSWIERRLR 213


>gi|294101060|ref|YP_003552918.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616040|gb|ADE56194.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 223

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 13/186 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R +   T   L  LY+  F   G P L+L+   + L+F  P  G        T+SP  
Sbjct: 42  IGRVYGNNTISFLCRLYVIFFK--GTPLLILL---FMLYFGLPSFG-------ITLSPFA 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S+   + C   A+ +E +R  + +V  GQ+ AA ALG+T  +A   ++LPQA R  IP 
Sbjct: 90  ASVLGFIIC-NGAYNSEYIRGAIQSVKGGQLIAAQALGMTKWQAILNIILPQAFRRAIPG 148

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            +++ + L+K SSLA  + + +L   G  + +++ +   +  +   IYL +  + +  ++
Sbjct: 149 CSNEMIYLIKYSSLAYMLTYIELTGAGKIVASRSFRYTLVFTVVGVIYLIMVTLASWLLS 208

Query: 387 RLNAKI 392
            L  K+
Sbjct: 209 LLEKKL 214



 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q ++P         A+L G + T  L    +      GT++  GR+  N  ++++CR+
Sbjct: 7   IQQDVLP---------ALLTGIIMTLKLIVVSIPFGIAAGTVIAIGRVYGNNTISFLCRL 57

Query: 132 YVEVFRNIPPLVVIFFLY 149
           YV  F+  P L+++F LY
Sbjct: 58  YVIFFKGTPLLILLFMLY 75


>gi|262282449|ref|ZP_06060217.1| amino acid permease [Streptococcus sp. 2_1_36FAA]
 gi|262261740|gb|EEY80438.1| amino acid permease [Streptococcus sp. 2_1_36FAA]
          Length = 226

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 40/177 (22%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+V+S+      RH+           + +  +  PLL    FL FGLP + L+   
Sbjct: 31  SFLLGLVVSII-----RHYRVPILRQIATAYIELSRNTPLLIQLFFLYFGLPRIGLV--- 82

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L  +        F+GGS                   ++AE  RSGL AV + Q E  +
Sbjct: 83  --LSSEACATIGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEIGL 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           ++GLT R+  R V+LPQA    +P  ++  + L+K +S+   V  ADL+ V   +I 
Sbjct: 122 SIGLTPRQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSVVALADLMYVAKDLIG 178


>gi|170289919|ref|YP_001736735.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173999|gb|ACB07052.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 215

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 10/148 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +VL++L Y   F  P LG         + P F +  IAL   ++A+ ++I  S L 
Sbjct: 55  GTPLIVLLSLLYWGVF--PALGV-------KIGP-FETSVIALGLRSSAYQSQIFLSALN 104

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V   Q+ AA ++G+  R+    VLLPQA+R  +P  +++Y  +LK+SS+  A+G  +++
Sbjct: 105 SVDSDQIIAARSIGMRERQVVAYVLLPQALRISLPSWSNEYAIMLKDSSICFALGVMEIL 164

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +    I   TG A+   L+   ++ SL+
Sbjct: 165 TRARYISVATGSALLPYLLAGILFFSLT 192


>gi|257887403|ref|ZP_05667056.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257895895|ref|ZP_05675548.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257823457|gb|EEV50389.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257832460|gb|EEV58881.1| amino acid ABC transporter [Enterococcus faecium Com12]
          Length = 209

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 42  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 84

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 85  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 144

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 145 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 184


>gi|261377616|ref|ZP_05982189.1| amino acid ABC transporter, permease protein [Neisseria cinerea
           ATCC 14685]
 gi|269146369|gb|EEZ72787.1| amino acid ABC transporter, permease protein [Neisseria cinerea
           ATCC 14685]
          Length = 222

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+  +  R + LPQ++R ++P   + +  ++
Sbjct: 99  WGIAEMGDLVRGALESIEKHQVESGLALGLSRGQVFRYIELPQSIRRVLPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|91780137|ref|YP_555344.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692797|gb|ABE35994.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC
           transporter membrane protein [Burkholderia xenovorans
           LB400]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 72/125 (57%), Gaps = 1/125 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +AL  + A + AE+ R+G+  VPRGQ EAA A  L+  ++ + V+LP+A+  +
Sbjct: 86  PALAAGVLALGVHYATYAAEVYRAGIENVPRGQWEAAKACNLSPAQSWQHVILPEAVPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  +++ K + L  A+   +L++    + N   + +E + +   ++L +S +IA+
Sbjct: 146 LPALANYLISMFKETPLLSAITVLELMNEAKIVANTDYRYLEPMTLVGVLFLCIS-LIAV 204

Query: 384 FMNRL 388
           F  RL
Sbjct: 205 FGVRL 209


>gi|300718193|ref|YP_003742996.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299064029|emb|CAX61149.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 216

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 63/109 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+   + A++AEI+R     V RGQ+EAA  LGL+       ++ PQ MR+ +P L ++
Sbjct: 93  VAIGMNSGAYVAEILRVNRRLVSRGQLEAARTLGLSRWLTWWYIINPQVMRASLPMLVNE 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +  LLK + LA  V   +L   G  +I ++ +A +++L+    YL +++
Sbjct: 153 FTILLKTTPLASVVALTELTYAGQIVIARSYEATQVMLLVSLGYLLIAL 201


>gi|293570941|ref|ZP_06681986.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E980]
 gi|291609004|gb|EFF38281.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E980]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 52  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 94

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 95  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 154

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 155 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 194


>gi|218463669|ref|ZP_03503760.1| octopine ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 199

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 9/155 (5%)

Query: 227 FLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+  G P LV + L Y    Q   +   LG + F         +    +AL+  TAA+ +
Sbjct: 25  FVFRGSPLLVQMFLIYYGLGQFRHELQDLGLWGFF-----REPYWCAVLALTLNTAAYCS 79

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL AV   ++EAA A G++     R ++LP A+R  +P   ++ + ++K ++LA 
Sbjct: 80  EIFRGGLQAVSVQEIEAARACGMSGVLLFRRIILPIAIRHALPAYGNEIILMIKATALAS 139

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +   ++  + G +I  + +A EI ++   IYL++
Sbjct: 140 VITIMEVTGLAGKLIADSFRAFEIFIVAGAIYLAI 174


>gi|90579333|ref|ZP_01235143.1| putative ABC-type arginine transport system, permease component
           [Vibrio angustum S14]
 gi|90440166|gb|EAS65347.1| putative ABC-type arginine transport system, permease component
           [Vibrio angustum S14]
          Length = 246

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 22/160 (13%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPV--LGQF--NFIGGSTVSPEF 266
           +  +A+  LY  T +I G+P LVL+ L +   Q+  +  +  + ++  N+   S  + E+
Sbjct: 45  RWARAIATLY--TTVIRGIPDLVLMMLIFFGGQMLLNDSLYNINEWLNNYFTQSDPNHEW 102

Query: 267 MSL---YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            S    YI +S + A          A++AE  R  ++AV +G++EA  A G++   + R 
Sbjct: 103 TSYLPDYIEISPFVAGILTIGFIFGAYMAETFRGAILAVDKGELEAGKAYGMSAFLSFRR 162

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +LLPQ +R  +P   + +L LLK ++L   +G  D+V  G
Sbjct: 163 ILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKG 202


>gi|298294126|ref|YP_003696065.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930637|gb|ADH91446.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 242

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 16/166 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFD 247
           F F+FV G+++ +    LSR+   +  +A   +Y S F+  G+PTL++I L +       
Sbjct: 31  FAFAFVFGVLIGV--ATLSRN---RLLQAAWRVYASIFM--GVPTLLVIFLVFYGGSAML 83

Query: 248 KPVLGQFNFIGGSTV--SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             VLG+     GS +  SP F +   AL+   AA+IAE+VR  +  +P+GQ E A AL +
Sbjct: 84  AAVLGEL----GSEIDISP-FGAGVTALAVVYAAYIAELVRGAIENLPKGQFEGARALAI 138

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
                   V+LPQ MR  +P L + +  +LK + L    G  DLV+
Sbjct: 139 PPIIMWGKVILPQVMRLALPGLVNVWSFMLKETPLVSLAGLQDLVA 184



 Score = 37.0 bits (84), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 7/57 (12%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           F+ +F  AF       + G L+G   LS N+L+    RVY  +F  +P L+VIF ++
Sbjct: 27  FLASFAFAF-------VFGVLIGVATLSRNRLLQAAWRVYASIFMGVPTLLVIFLVF 76


>gi|312863620|ref|ZP_07723858.1| amino acid ABC transporter, permease protein [Streptococcus
           vestibularis F0396]
 gi|311101156|gb|EFQ59361.1| amino acid ABC transporter, permease protein [Streptococcus
           vestibularis F0396]
          Length = 225

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 57/106 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I  + +  A + ++VR  + ++PR Q E+  +LGLT+ +    V++PQ +R ++P 
Sbjct: 93  LSAIIVFTLWGTAEMGDLVRGSITSLPRHQFESGRSLGLTNGQLYTYVIIPQVLRRLLPQ 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 153 AINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|312883551|ref|ZP_07743276.1| ABC transporter permease protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368774|gb|EFP96301.1| ABC transporter permease protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 246

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++     R VLLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMSSLMTFRRVLLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             +P   + +L LLK ++L   +G  D+V
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMV 199


>gi|90412872|ref|ZP_01220872.1| putative ABC-type arginine transport system, permease component
           [Photobacterium profundum 3TCK]
 gi|90326231|gb|EAS42658.1| putative ABC-type arginine transport system, permease component
           [Photobacterium profundum 3TCK]
          Length = 246

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 111/228 (48%), Gaps = 34/228 (14%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFD 247
           +F+ +LG++ +L   +LS +   +  +A+  +Y  T +I G+P LVL+ L +   Q+  +
Sbjct: 27  LFAVILGMLGAL--AKLSPY---RWARAIATIY--TTVIRGIPDLVLMMLIFFGGQMLLN 79

Query: 248 KPVL---GQFN-FIGGSTVSPEFMSL---YIALSCYTA----------AFIAEIVRSGLI 290
             +      FN +   S  + E+ +    YI +S + A          A++AE  R  ++
Sbjct: 80  DSLYRINEWFNEYFTSSDPTHEWTAYLPDYIEISPFVAGVLTIGFIFGAYMAETFRGAIL 139

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +G++EA  A G++  K+   +LLPQ +R  +P   + +L LLK ++L   +G  D+V
Sbjct: 140 SVDKGELEAGKAYGMSSFKSFHRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLDDMV 199

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G      T             Y++++++  LF     + +   E++
Sbjct: 200 RKGSLAAGATQMPFT-------FYMTIAVIFLLFTTLSTSALKWAERR 240


>gi|218548237|ref|YP_002382028.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia fergusonii ATCC 35469]
 gi|218355778|emb|CAQ88391.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia fergusonii
           ATCC 35469]
 gi|323967749|gb|EGB63161.1| inner membrane transport system [Escherichia coli M863]
 gi|323977491|gb|EGB72577.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324112845|gb|EGC06821.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325496652|gb|EGC94511.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia fergusonii
           ECD227]
 gi|327252579|gb|EGE64238.1| histidine transport system permease protein hisQ [Escherichia coli
           STEC_7v]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 217



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 35/66 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+    I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRFSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|149201668|ref|ZP_01878642.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144716|gb|EDM32745.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 291

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF   G     P ++   I LS    A+ +E +R  ++++P GQ E+A +LG + R    
Sbjct: 145 QFEIFGVKIPFPGWIKAVIGLSLPVMAYTSEFMRGAILSIPTGQWESAESLGFSRRMTLT 204

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI------ 366
            ++LPQ ++ ++P   + Y  L   + L   +G  D++++    ++  G+A  +      
Sbjct: 205 NIILPQTVKRVLPSWMNLYAVLTMATPLVSIIGVDDVMALTRAALSAEGRADLLIPMYLY 264

Query: 367 ILIWMFIY 374
           IL W F+Y
Sbjct: 265 ILSWFFLY 272


>gi|28869032|ref|NP_791651.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|28852272|gb|AAO55346.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|330879704|gb|EGH13853.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 229

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +    D      P+LG  ++I    + P  ++    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG
Sbjct: 114 RGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|328948880|ref|YP_004366217.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328449204|gb|AEB14920.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 220

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 66/120 (55%), Gaps = 3/120 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+    +++AE  RS L  V R Q+E+   +GLT  +  R V+LPQA    IP + + 
Sbjct: 91  IGLTFLGGSYMAETFRSSLETVGRVQLESGRCIGLTEFQIVRFVILPQAFSVSIPGICAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + L+K +S+  AV  ADL+ +   +I    +T +A+ ++++  FI L    +++ F  R
Sbjct: 151 TMFLIKETSMFSAVALADLMYIAKDLIGLYYKTEEALFLLVVSYFILLLPITILSSFAER 210


>gi|314938648|ref|ZP_07845928.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314944092|ref|ZP_07850755.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314950330|ref|ZP_07853611.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314951102|ref|ZP_07854164.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314992312|ref|ZP_07857746.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996123|ref|ZP_07861194.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313589680|gb|EFR68525.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593128|gb|EFR71973.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313596736|gb|EFR75581.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597319|gb|EFR76164.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313642036|gb|EFS06616.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313643347|gb|EFS07927.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 52  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 94

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 95  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 154

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 155 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 194


>gi|227551495|ref|ZP_03981544.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257884577|ref|ZP_05664230.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257898521|ref|ZP_05678174.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|227179392|gb|EEI60364.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257820415|gb|EEV47563.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257836433|gb|EEV61507.1| amino acid ABC transporter [Enterococcus faecium Com15]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 52  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 94

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 95  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 154

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 155 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 194


>gi|158424111|ref|YP_001525403.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331000|dbj|BAF88485.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 221

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 12/118 (10%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++LIA+   L F            G  +SP F  + +AL   T+A+  E+ R+GL +V
Sbjct: 73  PLVLLIAISAGLPF-----------AGIRLSP-FACVTLALFLNTSAYYGEVYRAGLDSV 120

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             GQ EAA   GL+  +A   V++PQA+R+++P L S  + ++K +SLA  V   +++
Sbjct: 121 SHGQWEAARCTGLSASQAMFYVIIPQAVRNVLPDLVSNTVEVVKLTSLASVVALPEML 178


>gi|126208816|ref|YP_001054041.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae L20]
 gi|126097608|gb|ABN74436.1| arginine transport system permease protein ArtQ [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 223

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|70729565|ref|YP_259303.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68343864|gb|AAY91470.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 236

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 52/82 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI+R  L+AV +GQ EA  AL L+   A R V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEILRGSLLAVAQGQREACKALSLSRWTAFRKVILPQSLLIAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
            + ++K S++A  V   DL+ V
Sbjct: 171 LILMIKASAIASLVTIYDLMGV 192


>gi|330429804|gb|AEC21138.1| polar amino acid ABC transporter, inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 225

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 16/171 (9%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL     L +G+ TL  +        + PVL      GG           +A+   
Sbjct: 62  RGTPLLVQLFILYYGIGTLGFVR-------ESPVLWWLFSDGGRCA-------ILAIGLN 107

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+++E++R G  +VP+GQ+EAA A G++     R ++ P A+R  +P  +++ +  +K
Sbjct: 108 SGAYVSEVLRGGFQSVPKGQIEAAQACGMSALMRFRRIVFPLAIRQALPAYSNEIVLAIK 167

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL--SLSIMIALFM 385
            +SLA  +   +L      ++NQ    IE  ++   +YL  + S++  L M
Sbjct: 168 GTSLASTIAVMELTGHAKRLMNQNYAIIETFVLAGALYLMINFSLLACLHM 218


>gi|319638913|ref|ZP_07993671.1| ABC transporter [Neisseria mucosa C102]
 gi|317399817|gb|EFV80480.1| ABC transporter [Neisseria mucosa C102]
          Length = 222

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+  +  R + LPQ++R ++P   + +  ++
Sbjct: 99  WGIAEMGDLVRGALESIEKHQVESGLALGLSRGQVFRYIELPQSIRRVLPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|257880921|ref|ZP_05660574.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|294620773|ref|ZP_06699979.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium U0317]
 gi|257816579|gb|EEV43907.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|291599630|gb|EFF30641.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium U0317]
          Length = 220

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 53  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 95

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 96  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 155

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 156 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 195


>gi|298529734|ref|ZP_07017137.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511170|gb|EFI35073.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 231

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 21/165 (12%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYTA------ 278
           T +I G+P L+LI L Y   +  P L Q        VS +F   +YI+   + A      
Sbjct: 57  TTVIRGIPELILILLVY---YGVPTLIQ-------DVSAKFGQPVYISFDPFVAGVATIG 106

Query: 279 ----AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               AF  E+ R   +AVPRGQ+EAA A G++     R V+LPQ MR  +P L + ++ L
Sbjct: 107 FIYGAFSTEVFRGAYLAVPRGQVEAARACGMSPALTFRRVVLPQMMRFALPGLGNVWMVL 166

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +K ++L   +   +L+         T +          IYL ++I
Sbjct: 167 IKATALISVIQLPELMRNADIAARATREPFTFFFAASLIYLFITI 211


>gi|213022067|ref|ZP_03336514.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 124

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+
Sbjct: 2   AAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKD 61

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++L   +   DL+    +I  +T +     +I   IYL ++++    + R++ +    E+
Sbjct: 62  TALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRFER 121

Query: 398 K 398
           +
Sbjct: 122 R 122


>gi|55823261|ref|YP_141702.1| ABC transporter amino acid permease [Streptococcus thermophilus
           CNRZ1066]
 gi|55739246|gb|AAV62887.1| ABC transporter amino acid permease protein [Streptococcus
           thermophilus CNRZ1066]
          Length = 231

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 11/176 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S +L I++ LF T L      K    +  +YIS F   G+PTLV + L   + +  P L 
Sbjct: 31  SMILAILIGLFITWLQLS-KNKVLIFISQVYISLFR--GMPTLVQLFL---IFYGLPQLF 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F G S ++       I L    AA+++EI R+ + ++ +GQ+EA  AL +   K   
Sbjct: 85  P-AFKGMSALTAAL----IGLGLKEAAYLSEIFRAAINSIDKGQIEAGEALNIPAWKVFL 139

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            V+LPQA  + +P   + +++LLK +SLA  +G  +L      I  ++ +  E  L
Sbjct: 140 HVILPQATLNALPATGNTFISLLKETSLAFTLGITELFGNAKMIAGESFRYFETYL 195



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 38/62 (61%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++A   MI A +IG  +   +LS NK++ +I +VY+ +FR +P LV +F ++  +  +
Sbjct: 24  TIFIALISMILAILIGLFITWLQLSKNKVLIFISQVYISLFRGMPTLVQLFLIFYGLPQL 83

Query: 156 LP 157
            P
Sbjct: 84  FP 85


>gi|315285930|gb|EFU45368.1| arginine/ornithine transport protein [Escherichia coli MS 110-3]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|251788998|ref|YP_003003719.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537619|gb|ACT06240.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 238

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L ++SLA  V   DL+ V   I   T +      I   +YL++S ++I+LF
Sbjct: 167 VILMLHSTSLAFTVTVPDLLKVARDINAATYKPFYAFGIAGVMYLAISFVLISLF 221


>gi|260598727|ref|YP_003211298.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Cronobacter turicensis z3032]
 gi|260217904|emb|CBA32476.1| Histidine transport system permease protein hisM [Cronobacter
           turicensis z3032]
          Length = 238

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|261368433|ref|ZP_05981316.1| amino acid ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
 gi|282569524|gb|EFB75059.1| amino acid ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 53/91 (58%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S  S   ++  +A +   A + +EI R G+ AVP+GQ EA   LG+T  +    V L Q 
Sbjct: 85  SGSSGRLVAAVVAFAINYACYFSEIYRGGIEAVPKGQTEAGQVLGMTRSQIFFKVTLLQV 144

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ I+PP+ ++ + L+K++SLA  +   D++
Sbjct: 145 IKRILPPMGNEIITLVKDTSLANVIANKDII 175


>gi|170767557|ref|ZP_02902010.1| histidine ABC transporter, permease protein HisQ [Escherichia
           albertii TW07627]
 gi|170123891|gb|EDS92822.1| histidine ABC transporter, permease protein HisQ [Escherichia
           albertii TW07627]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRWQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|163855574|ref|YP_001629872.1| polar amino acid transport system permease protein [Bordetella
           petrii DSM 12804]
 gi|163259302|emb|CAP41602.1| polar amino acid transport system permease protein [Bordetella
           petrii]
          Length = 221

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +L IAL+   A ++AE  R GL AVP  QM AA +LG++  KA   V+ PQ    +
Sbjct: 89  PSFTALLIALTFNNAGYLAETFRGGLSAVPPTQMAAARSLGMSPTKAYVHVIFPQVFVLV 148

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
             P  +Q    L NSSL   +G  +L        +++ +  E  ++   +Y  +S +I++
Sbjct: 149 FLPYMNQLNWALLNSSLGSIIGVRELTGATQAAQSESFRTFEFFIVAAGMYYVISKLISI 208


>gi|69248090|ref|ZP_00604619.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|258616183|ref|ZP_05713953.1| transport system membrane protein [Enterococcus faecium DO]
 gi|68194564|gb|EAN09056.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 52  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 94

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 95  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 154

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 155 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 194


>gi|116628270|ref|YP_820889.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101547|gb|ABJ66693.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 225

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 57/106 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I  + +  A + ++VR  + ++PR Q ++  ALGLT+ +    V++PQ +R ++P 
Sbjct: 93  LSAIIVFTLWGTAEMGDLVRGSITSLPRHQFDSGRALGLTNGQLYTYVIIPQVLRRLLPQ 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 153 AINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|53728961|ref|ZP_00348281.1| COG4215: ABC-type arginine transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 209

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 80  LALSLIFSAYASQSLRGAIQAVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQ 139

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 140 WLVLLKDTALISLIGVDDLMRQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEK 199

Query: 391 KIALKEK 397
           +    E+
Sbjct: 200 RFTRFER 206


>gi|26248696|ref|NP_754736.1| histidine transport system permease hisQ [Escherichia coli CFT073]
 gi|74312825|ref|YP_311244.1| histidine transport system permease [Shigella sonnei Ss046]
 gi|82777719|ref|YP_404068.1| histidine transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|91211604|ref|YP_541590.1| histidine transport system permease hisQ [Escherichia coli UTI89]
 gi|117624498|ref|YP_853411.1| histidine transport system permease protein HisQ [Escherichia coli
           APEC O1]
 gi|157158838|ref|YP_001463652.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E24377A]
 gi|157161795|ref|YP_001459113.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           HS]
 gi|170019383|ref|YP_001724337.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170680291|ref|YP_001744508.1| histidine ABC transporter permease HisQ [Escherichia coli SMS-3-5]
 gi|188495755|ref|ZP_03003025.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           53638]
 gi|191169477|ref|ZP_03031211.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           B7A]
 gi|193062411|ref|ZP_03043506.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E22]
 gi|193068273|ref|ZP_03049237.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E110019]
 gi|194429462|ref|ZP_03061985.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           B171]
 gi|209919808|ref|YP_002293892.1| histidine ABC transporter permease [Escherichia coli SE11]
 gi|215487521|ref|YP_002329952.1| histidine/lysine/arginine/ornithine transporter subunit HisQ,
           membrane component of ABC superfamily [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218554864|ref|YP_002387777.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli IAI1]
 gi|218559221|ref|YP_002392134.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli S88]
 gi|218690468|ref|YP_002398680.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli ED1a]
 gi|218695907|ref|YP_002403574.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli 55989]
 gi|218700784|ref|YP_002408413.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli IAI39]
 gi|218705838|ref|YP_002413357.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli UMN026]
 gi|227887366|ref|ZP_04005171.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein HisQ [Escherichia coli 83972]
 gi|237704785|ref|ZP_04535266.1| histidine transport system permease hisQ [Escherichia sp.
           3_2_53FAA]
 gi|256017534|ref|ZP_05431399.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Shigella sp. D9]
 gi|260856352|ref|YP_003230243.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O26:H11 str. 11368]
 gi|260869030|ref|YP_003235432.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O111:H- str. 11128]
 gi|291283549|ref|YP_003500367.1| ABC-type arginine transport system permease [Escherichia coli
           O55:H7 str. CB9615]
 gi|293405774|ref|ZP_06649766.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|293410665|ref|ZP_06654241.1| histidine ABC transporter [Escherichia coli B354]
 gi|293415600|ref|ZP_06658243.1| histidine transport system permease [Escherichia coli B185]
 gi|293446645|ref|ZP_06663067.1| histidine transport system permease [Escherichia coli B088]
 gi|298381457|ref|ZP_06991056.1| histidine ABC transporter [Escherichia coli FVEC1302]
 gi|300818089|ref|ZP_07098301.1| arginine/ornithine transport protein [Escherichia coli MS 107-1]
 gi|300822182|ref|ZP_07102324.1| arginine/ornithine transport protein [Escherichia coli MS 119-7]
 gi|300896990|ref|ZP_07115469.1| arginine/ornithine transport protein [Escherichia coli MS 198-1]
 gi|300903698|ref|ZP_07121613.1| arginine/ornithine transport protein [Escherichia coli MS 84-1]
 gi|300918520|ref|ZP_07135113.1| arginine/ornithine transport protein [Escherichia coli MS 115-1]
 gi|300924577|ref|ZP_07140539.1| arginine/ornithine transport protein [Escherichia coli MS 182-1]
 gi|300936886|ref|ZP_07151773.1| arginine/ornithine transport protein [Escherichia coli MS 21-1]
 gi|300983441|ref|ZP_07176590.1| arginine/ornithine transport protein [Escherichia coli MS 45-1]
 gi|301024139|ref|ZP_07187849.1| arginine/ornithine transport protein [Escherichia coli MS 69-1]
 gi|301049066|ref|ZP_07196050.1| arginine/ornithine transport protein [Escherichia coli MS 185-1]
 gi|301303230|ref|ZP_07209355.1| arginine/ornithine transport protein [Escherichia coli MS 124-1]
 gi|301328809|ref|ZP_07221854.1| arginine/ornithine transport protein [Escherichia coli MS 78-1]
 gi|307311131|ref|ZP_07590775.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309784982|ref|ZP_07679615.1| histidine transport system permease protein hisQ [Shigella
           dysenteriae 1617]
 gi|309793191|ref|ZP_07687619.1| arginine/ornithine transport protein [Escherichia coli MS 145-7]
 gi|312967608|ref|ZP_07781823.1| histidine transport system permease protein hisQ [Escherichia coli
           2362-75]
 gi|312973432|ref|ZP_07787604.1| histidine transport system permease protein hisQ [Escherichia coli
           1827-70]
 gi|331663824|ref|ZP_08364734.1| histidine transport system permease protein HisQ [Escherichia coli
           TA143]
 gi|331669007|ref|ZP_08369855.1| histidine transport system permease protein HisQ [Escherichia coli
           TA271]
 gi|331673811|ref|ZP_08374574.1| histidine transport system permease protein HisQ [Escherichia coli
           TA280]
 gi|331678254|ref|ZP_08378929.1| histidine transport system permease protein HisQ [Escherichia coli
           H591]
 gi|26109101|gb|AAN81304.1|AE016763_263 Histidine transport system permease protein hisQ [Escherichia coli
           CFT073]
 gi|73856302|gb|AAZ89009.1| histidine transport system permease protein [Shigella sonnei Ss046]
 gi|81241867|gb|ABB62577.1| histidine transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|91073178|gb|ABE08059.1| histidine transport system permease protein hisQ [Escherichia coli
           UTI89]
 gi|115513622|gb|ABJ01697.1| histidine transport system permease protein HisQ [Escherichia coli
           APEC O1]
 gi|157067475|gb|ABV06730.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           HS]
 gi|157080868|gb|ABV20576.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E24377A]
 gi|169754311|gb|ACA77010.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170518009|gb|ACB16187.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           SMS-3-5]
 gi|188490954|gb|EDU66057.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           53638]
 gi|190900479|gb|EDV60294.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           B7A]
 gi|192932077|gb|EDV84676.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E22]
 gi|192958552|gb|EDV88991.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E110019]
 gi|194412523|gb|EDX28822.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           B171]
 gi|195183047|dbj|BAG66607.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O111:H-]
 gi|209764894|gb|ACI80759.1| histidine transport system permease protein [Escherichia coli]
 gi|209913067|dbj|BAG78141.1| histidine ABC transporter permease component [Escherichia coli
           SE11]
 gi|215265593|emb|CAS09996.1| histidine/lysine/arginine/ornithine transporter subunit HisQ,
           membrane component of ABC superfamily [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218352639|emb|CAU98420.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli 55989]
 gi|218361632|emb|CAQ99226.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli IAI1]
 gi|218365990|emb|CAR03734.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli S88]
 gi|218370770|emb|CAR18583.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli IAI39]
 gi|218428032|emb|CAV17819.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli ED1a]
 gi|218432935|emb|CAR13829.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli UMN026]
 gi|222034064|emb|CAP76805.1| Histidine transport system permease protein hisQ [Escherichia coli
           LF82]
 gi|226901151|gb|EEH87410.1| histidine transport system permease hisQ [Escherichia sp.
           3_2_53FAA]
 gi|227835716|gb|EEJ46182.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein HisQ [Escherichia coli 83972]
 gi|257755001|dbj|BAI26503.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O26:H11 str. 11368]
 gi|257765386|dbj|BAI36881.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O111:H- str. 11128]
 gi|284922296|emb|CBG35381.1| histidine ABC transporter, permease protein [Escherichia coli 042]
 gi|290763422|gb|ADD57383.1| ABC-type arginine transport system, permease component [Escherichia
           coli O55:H7 str. CB9615]
 gi|291323475|gb|EFE62903.1| histidine transport system permease [Escherichia coli B088]
 gi|291427982|gb|EFF01009.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|291433248|gb|EFF06227.1| histidine transport system permease [Escherichia coli B185]
 gi|291471133|gb|EFF13617.1| histidine ABC transporter [Escherichia coli B354]
 gi|294492902|gb|ADE91658.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           IHE3034]
 gi|298278899|gb|EFI20413.1| histidine ABC transporter [Escherichia coli FVEC1302]
 gi|300299113|gb|EFJ55498.1| arginine/ornithine transport protein [Escherichia coli MS 185-1]
 gi|300359171|gb|EFJ75041.1| arginine/ornithine transport protein [Escherichia coli MS 198-1]
 gi|300396683|gb|EFJ80221.1| arginine/ornithine transport protein [Escherichia coli MS 69-1]
 gi|300404280|gb|EFJ87818.1| arginine/ornithine transport protein [Escherichia coli MS 84-1]
 gi|300408529|gb|EFJ92067.1| arginine/ornithine transport protein [Escherichia coli MS 45-1]
 gi|300414334|gb|EFJ97644.1| arginine/ornithine transport protein [Escherichia coli MS 115-1]
 gi|300419208|gb|EFK02519.1| arginine/ornithine transport protein [Escherichia coli MS 182-1]
 gi|300457997|gb|EFK21490.1| arginine/ornithine transport protein [Escherichia coli MS 21-1]
 gi|300525312|gb|EFK46381.1| arginine/ornithine transport protein [Escherichia coli MS 119-7]
 gi|300529233|gb|EFK50295.1| arginine/ornithine transport protein [Escherichia coli MS 107-1]
 gi|300841404|gb|EFK69164.1| arginine/ornithine transport protein [Escherichia coli MS 124-1]
 gi|300844809|gb|EFK72569.1| arginine/ornithine transport protein [Escherichia coli MS 78-1]
 gi|306908637|gb|EFN39134.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307554369|gb|ADN47144.1| histidine transport system permease protein HisQ [Escherichia coli
           ABU 83972]
 gi|307626155|gb|ADN70459.1| ABC-type arginine transport system permease [Escherichia coli
           UM146]
 gi|308123477|gb|EFO60739.1| arginine/ornithine transport protein [Escherichia coli MS 145-7]
 gi|308927352|gb|EFP72826.1| histidine transport system permease protein hisQ [Shigella
           dysenteriae 1617]
 gi|310332027|gb|EFP99262.1| histidine transport system permease protein hisQ [Escherichia coli
           1827-70]
 gi|312287805|gb|EFR15710.1| histidine transport system permease protein hisQ [Escherichia coli
           2362-75]
 gi|312946927|gb|ADR27754.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|315061601|gb|ADT75928.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli W]
 gi|315255245|gb|EFU35213.1| arginine/ornithine transport protein [Escherichia coli MS 85-1]
 gi|315292287|gb|EFU51639.1| arginine/ornithine transport protein [Escherichia coli MS 153-1]
 gi|320178717|gb|EFW53680.1| Histidine ABC transporter, permease protein HisQ [Shigella boydii
           ATCC 9905]
 gi|320199899|gb|EFW74488.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           EC4100B]
 gi|320657373|gb|EFX25175.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320663075|gb|EFX30392.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|323156459|gb|EFZ42614.1| histidine transport system permease protein hisQ [Escherichia coli
           EPECa14]
 gi|323161645|gb|EFZ47530.1| histidine transport system permease protein hisQ [Escherichia coli
           E128010]
 gi|323168520|gb|EFZ54200.1| histidine transport system permease protein hisQ [Shigella sonnei
           53G]
 gi|323171991|gb|EFZ57635.1| histidine transport system permease protein hisQ [Escherichia coli
           LT-68]
 gi|323176766|gb|EFZ62356.1| histidine transport system permease protein hisQ [Escherichia coli
           1180]
 gi|323187967|gb|EFZ73262.1| histidine transport system permease protein hisQ [Escherichia coli
           RN587/1]
 gi|323377818|gb|ADX50086.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323944821|gb|EGB40887.1| inner membrane transport system [Escherichia coli H120]
 gi|323952101|gb|EGB47975.1| inner membrane transport system [Escherichia coli H252]
 gi|323956074|gb|EGB51827.1| inner membrane transport system [Escherichia coli H263]
 gi|324020830|gb|EGB90049.1| arginine/ornithine transport protein [Escherichia coli MS 117-3]
 gi|324117814|gb|EGC11713.1| inner membrane transport system [Escherichia coli E1167]
 gi|331059623|gb|EGI31600.1| histidine transport system permease protein HisQ [Escherichia coli
           TA143]
 gi|331064201|gb|EGI36112.1| histidine transport system permease protein HisQ [Escherichia coli
           TA271]
 gi|331069084|gb|EGI40476.1| histidine transport system permease protein HisQ [Escherichia coli
           TA280]
 gi|331074714|gb|EGI46034.1| histidine transport system permease protein HisQ [Escherichia coli
           H591]
 gi|332088439|gb|EGI93557.1| histidine transport system permease protein hisQ [Shigella boydii
           5216-82]
 gi|332100894|gb|EGJ04240.1| histidine/lysine/arginine/ornithine transporter subunit [Shigella
           sp. D9]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 39.7 bits (91), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|282865054|ref|ZP_06274107.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces sp. ACTE]
 gi|282559977|gb|EFB65526.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces sp. ACTE]
          Length = 214

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 7/164 (4%)

Query: 235 LVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIA---LSCYTAAFIAEIVRSGL 289
           LV + +K  + F +  P+L Q   +G + V      L I    L  + A + +E+ R+G+
Sbjct: 52  LVTVPVKAVMEFVRATPLLVQL--VGAAAVFTSVEPLTIGIVVLGIHYATYTSEVYRAGI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             VP+GQ EA  AL L+ R+  + V+LPQA+R+++P L +  +++ K +     +   ++
Sbjct: 110 DGVPKGQWEACRALSLSPRRTWQAVILPQAVRNVLPALGNYAISMFKETPFLAVITVQEM 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           V              E+  +   I+L  S   +L M +L  ++ 
Sbjct: 170 VFEARKYGTDHFAYTEVFTLAGLIFLVASYPTSLLMRKLEKRLG 213


>gi|4204970|gb|AAD10860.1| orf Q; putative ATP-binding cassette transport system; similar to
           integral membrane proteins and to components of ABC
           transport systems [Leuconostoc lactis]
          Length = 226

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 52/89 (58%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + AA  ++I+R  + +VPR Q E+A ALGL+  +  R VL+PQ + + I P  +    
Sbjct: 100 ALWFAAEFSDIIRGSIQSVPRQQRESAFALGLSTFQIFRFVLIPQGLLTAISPFINLSTR 159

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           ++K +S+ + +   D+++VG  II    Q
Sbjct: 160 IIKTTSILLLISVTDVITVGQQIIEANSQ 188



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 37/63 (58%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T IL G   T  ++ + ++  T+IG ++GA    + K V  + ++Y+E+FR IP + ++F
Sbjct: 16  TRILGGLETTIVISLTSIVLGTLIGIVLGALWTLSGKWVKLVFKIYLEIFRIIPTIPLLF 75

Query: 147 FLY 149
             Y
Sbjct: 76  LFY 78


>gi|331647963|ref|ZP_08349055.1| histidine transport system permease protein HisQ [Escherichia coli
           M605]
 gi|281179394|dbj|BAI55724.1| histidine ABC transporter permease component [Escherichia coli
           SE15]
 gi|330912131|gb|EGH40641.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           AA86]
 gi|331043687|gb|EGI15825.1| histidine transport system permease protein HisQ [Escherichia coli
           M605]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 217



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +++ IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSSVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|218674962|ref|ZP_03524631.1| putative permease component of ABC transporter [Rhizobium etli
           GR56]
          Length = 223

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 65/117 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I 
Sbjct: 89  ELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  SS+   +   DL      I ++T +A E   +   IYL+L+I++
Sbjct: 149 PALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRTFRAFEAYFVSTAIYLALAILL 205


>gi|213968637|ref|ZP_03396779.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301385504|ref|ZP_07233922.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302059836|ref|ZP_07251377.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132497|ref|ZP_07258487.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213926570|gb|EEB60123.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 229

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +    D      P+LG  ++I    + P  ++    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG
Sbjct: 114 RGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|209546986|ref|YP_002278904.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538230|gb|ACI58164.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 224

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 7/165 (4%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +FV S VLG  L L    L R+   K   A    Y  T +I G+P L++I L Y   F  
Sbjct: 18  VFVLSCVLGTGLGLLIAIL-RNSRRKIIAASLQAY--TAIIRGVPELLIILLMY---FGG 71

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L    F GG      F +   AL+   +A+ AEI R  + A+  GQ EAA++LGL   
Sbjct: 72  TALLSAVF-GGYVEINAFAAGVTALTIVFSAYAAEIFRGAINAIAPGQSEAAMSLGLPQW 130

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +   LV++PQ +   +P   +  ++L+K++SL   VG  D++ V 
Sbjct: 131 QIWLLVIIPQMVPIALPAFCNLCISLIKDTSLISVVGLTDVMRVA 175


>gi|191170156|ref|ZP_03031710.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           F11]
 gi|306814580|ref|ZP_07448742.1| ABC-type arginine transport system permease [Escherichia coli
           NC101]
 gi|190909672|gb|EDV69257.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           F11]
 gi|305851974|gb|EFM52426.1| ABC-type arginine transport system permease [Escherichia coli
           NC101]
 gi|324006682|gb|EGB75901.1| arginine/ornithine transport protein [Escherichia coli MS 57-2]
 gi|324013190|gb|EGB82409.1| arginine/ornithine transport protein [Escherichia coli MS 60-1]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 217



 Score = 39.7 bits (91), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +  +G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGASGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|293377065|ref|ZP_06623275.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|292644281|gb|EFF62381.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 220

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 53  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 95

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 96  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 155

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 156 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 195


>gi|260776171|ref|ZP_05885066.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607394|gb|EEX33659.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 246

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G++   A R +LLPQ +R
Sbjct: 112 VSP-FVAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMSPVLAFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   + +L LLK ++L   +G  D+V +       T             Y++++I+ 
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKMPFT-------FYMAVAIIF 223

Query: 382 ALFMNRLNAKIALKEKK 398
             F +     + L E+K
Sbjct: 224 LFFTSVSTGLLKLVERK 240


>gi|257878297|ref|ZP_05657950.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257889502|ref|ZP_05669155.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257892557|ref|ZP_05672210.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260559848|ref|ZP_05832027.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|293559677|ref|ZP_06676205.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1162]
 gi|293569921|ref|ZP_06681008.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1071]
 gi|294615206|ref|ZP_06695087.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1636]
 gi|294620020|ref|ZP_06699385.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1679]
 gi|257812525|gb|EEV41283.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257825862|gb|EEV52488.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257828936|gb|EEV55543.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260074072|gb|EEW62395.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|291587669|gb|EFF19546.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1071]
 gi|291591930|gb|EFF23558.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1636]
 gi|291593742|gb|EFF25251.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1679]
 gi|291606352|gb|EFF35758.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1162]
          Length = 220

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 53  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 95

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 96  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 155

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 156 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 195


>gi|239820512|ref|YP_002947697.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805365|gb|ACS22431.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 226

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 4/145 (2%)

Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           GQF+ I  S + P     Y    IAL   +AA+  + + + L A+PRG  EAA  LGL  
Sbjct: 78  GQFDLIRHSVLWPVLRDPYWCVVIALGLNSAAYTGKTLGAALAAIPRGTREAARVLGLGR 137

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +A  L+ LP A+R+ +P   ++ +   K +SLA  V   +L      +  +T    EI 
Sbjct: 138 AQAFGLIDLPLAVRAALPAFGNEIILTCKATSLASTVTLLELTGSARLLTAETYAPYEIF 197

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
           L    +YL+++ ++   +  L A +
Sbjct: 198 LGAGLVYLAINYVLLRGVRALEASL 222


>gi|83647881|ref|YP_436316.1| arginine ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83635924|gb|ABC31891.1| ABC-type arginine transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 235

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 44/73 (60%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+++E  R   +AV RGQ+EA +A G+   +  + ++ PQ MR  +P L + +L +LK 
Sbjct: 112 GAYMSETFRGAFLAVERGQIEAGLAYGMNRWQIFKRIMFPQMMRHALPGLGNNWLVMLKT 171

Query: 338 SSLAVAVGFADLV 350
           ++L   +G  D+V
Sbjct: 172 TALVSVIGMEDMV 184


>gi|330966764|gb|EGH67024.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 229

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +    D      P+LG  ++I    + P  ++    L     A+++E  
Sbjct: 58  GIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGAYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG
Sbjct: 114 RGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|257465093|ref|ZP_05629464.1| arginine transporter permease subunit ArtQ [Actinobacillus minor
           202]
 gi|257450753|gb|EEV24796.1| arginine transporter permease subunit ArtQ [Actinobacillus minor
           202]
          Length = 223

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 67/127 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   AA+ ++ +R  + AVP GQ E+  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFAAYASQSLRGAIQAVPIGQWESGTALGLSRGYTFIHIIMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q      +   IYL+++++  + +  L  
Sbjct: 154 WLVLLKDTALVSLIGVHDLMRQSELINTNEHQPFTWFGLAALIYLAITLVSQVIIRYLEL 213

Query: 391 KIALKEK 397
           +    E+
Sbjct: 214 RFTRFER 220


>gi|156933100|ref|YP_001437016.1| hypothetical protein ESA_00910 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531354|gb|ABU76180.1| hypothetical protein ESA_00910 [Cronobacter sakazakii ATCC BAA-894]
          Length = 238

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|70732345|ref|YP_262101.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68346644|gb|AAY94250.1| amino acid ABC transporter, permease protein VC1862 [Pseudomonas
           fluorescens Pf-5]
          Length = 237

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 55/95 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+ AEI+R  + A+P GQ+EAA A G+      R +LLP  +   + 
Sbjct: 104 FIAAVLVLGIVQGAYSAEIIRGAIQAIPHGQIEAARAYGIERWLLVRRILLPSMLPYAMA 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            L++ +L L+K+S+L   VG+++L+SVG      T
Sbjct: 164 GLSNLWLVLVKDSALISIVGYSELLSVGKQAAGST 198


>gi|315639021|ref|ZP_07894191.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
 gi|315480933|gb|EFU71567.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
          Length = 233

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 73/134 (54%), Gaps = 4/134 (2%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            ++ P F    + LS    A++AE +R+G  +V + Q EA ++LG +     R V+LPQA
Sbjct: 98  ESLRPAFACAIVGLSFLGGAYMAEALRAGFESVKKQQFEAGLSLGFSAFGNLRYVILPQA 157

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYL 375
           +   +  +++  + L+K +S+   +   DLV++  ++ + T +  E++ +    ++ I L
Sbjct: 158 LAVAMSGISANIIFLIKETSVVSIIALPDLVTLMKSLNSLTYKTDELLFMLFMGYLCIIL 217

Query: 376 SLSIMIALFMNRLN 389
            LS+M++    RL 
Sbjct: 218 PLSLMLSFVEKRLR 231



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 92  GFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            FV   WL    +F G++ + IIG           K +  +C++Y+E  RN P L+ +FF
Sbjct: 12  AFVEAAWLTLKLSFWGVVFSLIIGFFCVLMHFFKLKFMGNLCQIYIEFSRNTPLLIQLFF 71

Query: 148 LYKSV 152
           LY ++
Sbjct: 72  LYYAL 76


>gi|300313536|ref|YP_003777628.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076321|gb|ADJ65720.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 223

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 24/162 (14%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L        +H              S ++   +++ I L  Y+  
Sbjct: 68  PFLVQLFFIFFGLPSL-------DIHI-------------SEITAAIVAMVINLGAYST- 106

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
              EI+R+G+ A+PRGQ+EAA +L ++  +  R ++L  A++ I P L+SQ + ++  S+
Sbjct: 107 ---EIIRAGVQAIPRGQIEAAQSLSMSRMQIFRHIILRPALQKIWPALSSQVVIVMLGSA 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +   +   +L      I  +  +A E  ++   IYL L+I++
Sbjct: 164 VCSQIAVEELSFAANFIQGRNFRAFEAYIVATAIYLVLAILL 205


>gi|149189500|ref|ZP_01867784.1| amino acid ABC transporter, permease [Vibrio shilonii AK1]
 gi|148836657|gb|EDL53610.1| amino acid ABC transporter, permease [Vibrio shilonii AK1]
          Length = 215

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A+ A+++R+ +  V R  +EAA + GL      R ++LP A+R+ I PL S 
Sbjct: 86  LALSIAVGAYCADVLRAAVQQVDRDVIEAAQSFGLKRLTIYRKIILPIALRNSIKPLGSI 145

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS----LSIMIALFMN 386
           ++NL+  +S+   V   +L      I  +T +  E+    +  Y      LSI+I L   
Sbjct: 146 FVNLILTTSILSTVTLNELTGTAKIIAAETFRPFEVYFFLLLFYCVLTYILSILITLAHK 205

Query: 387 RLN 389
           RLN
Sbjct: 206 RLN 208



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 38/65 (58%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  + + GF  T  ++ + +I +  IG LV    +S +K+++     Y+ VFRNIP +V 
Sbjct: 4   YLDSFIEGFAITASISVASIIGSFCIGLLVMFACISQSKVLSKTGYTYINVFRNIPFIVQ 63

Query: 145 IFFLY 149
           +FF++
Sbjct: 64  VFFIF 68


>gi|55821557|ref|YP_139999.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823485|ref|YP_141926.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55737542|gb|AAV61184.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739470|gb|AAV63111.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 231

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 57/106 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I  + +  A + ++VR  + ++PR Q ++  ALGLT+ +    V++PQ +R ++P 
Sbjct: 99  LSAIIVFTLWGTAEMGDLVRGSITSLPRHQFDSGRALGLTNGQLYTYVIIPQVLRRLLPQ 158

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 159 AINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 204


>gi|26991115|ref|NP_746540.1| amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|24986153|gb|AAN70004.1|AE016638_12 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 218

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 64/123 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  +  A+ AEI+R  + +V +GQ EA  AL        R ++LPQA+ + + P T+ 
Sbjct: 88  VGLGLHIGAYGAEIMRGAINSVAKGQYEACTALNFRPFTRFRRIILPQALLAAMGPGTNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  ADL      +   T + +++  + + +Y  ++  I L M RL  
Sbjct: 148 LIELLKNTSLVSLITLADLSFRARQLDQATFETLKVFALALLMYFVMAQAINLAMRRLER 207

Query: 391 KIA 393
            +A
Sbjct: 208 HLA 210



 Score = 43.9 bits (102), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F G + A +  TL   G++S  + + W C VY+E+FR    LV +F+L
Sbjct: 8   MLQGAWVTLQITFFGSLLAIVAATLAALGKMSTWRPLRWFCVVYIEIFRGTSLLVQLFWL 67

Query: 149 YKSVLSVLPIPDHSIVL 165
           +     VLP+P  ++ L
Sbjct: 68  F----FVLPLPPFNLEL 80


>gi|146279203|ref|YP_001169361.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145557444|gb|ABP72056.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 218

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 16/177 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RLSR F  +   AL  +YI  F      T + + L + ++F  P         G T+SP 
Sbjct: 40  RLSRFFAVR---ALATVYIEFFR----GTSIFVQL-FWVYFVLP-------FAGITLSP- 83

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  + L     A+ AE+VR  +++VP+ Q+EA +AL LT  +  R V+LPQA+  ++P
Sbjct: 84  LAAGVLTLGLNVGAYGAEVVRGAVLSVPKDQLEATVALNLTRFQRMRHVILPQALPLMLP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
              +  + LLK +++   +   D+      +  QTG  +   +  + +Y ++++ I 
Sbjct: 144 TFGNNAIELLKATAVVSLISLPDMTFQAQVVRAQTGNTLLPFVTILVLYYAMAMAIG 200


>gi|262068034|ref|ZP_06027646.1| amino acid ABC transporter, permease protein [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378256|gb|EFE85774.1| amino acid ABC transporter, permease protein [Fusobacterium
           periodonticum ATCC 33693]
          Length = 226

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SPE  S  I  + +  A + ++VR  + ++P+ Q+E+A AL L  ++    V++PQ
Sbjct: 86  GLHISPE-ASAIIVFTIWGTAEMGDLVRGAIESIPKIQIESATALALDKKQIYLYVIIPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +R +IP   +    ++K +SL V +G  +++ VG  II+
Sbjct: 145 IIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQIID 184


>gi|170516839|gb|ACB15241.1| glutamine transport ATP-binding protein GlnQ [uncultured marine
           group II euryarchaeote DeepAnt-15E7]
          Length = 545

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 43/65 (66%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +   +IAE++R GL AV  GQ EAAIALGL+  +    V LP A+R+ +P + S ++ L 
Sbjct: 414 FGGCYIAEVLRGGLQAVDSGQKEAAIALGLSPFQTKMQVELPNAVRTTLPSIVSVFIGLW 473

Query: 336 KNSSL 340
           K+++L
Sbjct: 474 KDTTL 478


>gi|120556216|ref|YP_960567.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinobacter aquaeolei VT8]
 gi|120326065|gb|ABM20380.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Marinobacter aquaeolei VT8]
          Length = 234

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 61/126 (48%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  + +     A++ E  R   +AV +GQ+EAA A G +     R V++PQ +R  +P
Sbjct: 100 FISGVVTIGLIFGAYMTETFRGAFLAVEKGQIEAARAYGFSTWHTFRRVMIPQMLRHALP 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  LLK ++L   +G  D+V V               +    +YL+L+    LF+
Sbjct: 160 GIGNNWQVLLKTTALVSIIGLTDMVRVAEEAAKAERMPFHFFIPVAAVYLALTAGSELFI 219

Query: 386 NRLNAK 391
             L+ +
Sbjct: 220 KWLDKR 225


>gi|107022625|ref|YP_620952.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|105892814|gb|ABF75979.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 240

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 68/127 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   AA+++E +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  +P L++ 
Sbjct: 113 IALSANVAAYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIAVPSLSNS 172

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+K++SL   +   +L+     +I  T Q + + L    +Y  L  ++         
Sbjct: 173 LISLIKDTSLVSVITVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEWGQRWYEK 232

Query: 391 KIALKEK 397
           +++L  +
Sbjct: 233 RLSLPSR 239


>gi|294782143|ref|ZP_06747469.1| amino acid ABC transporter, permease protein [Fusobacterium sp.
           1_1_41FAA]
 gi|294480784|gb|EFG28559.1| amino acid ABC transporter, permease protein [Fusobacterium sp.
           1_1_41FAA]
          Length = 226

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SPE  S  I  + +  A + ++VR  + ++P+ Q+E+A AL L  ++    V++PQ
Sbjct: 86  GLHISPE-ASAIIVFTIWGTAEMGDLVRGAIESIPKIQIESATALALDKKQIYLYVIIPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +R +IP   +    ++K +SL V +G  +++ VG  II+
Sbjct: 145 IIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQIID 184


>gi|260844895|ref|YP_003222673.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O103:H2 str. 12009]
 gi|257760042|dbj|BAI31539.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O103:H2 str. 12009]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|149907744|ref|ZP_01896491.1| ABC-type arginine transport system, permease component [Moritella
           sp. PE36]
 gi|149809414|gb|EDM69343.1| ABC-type arginine transport system, permease component [Moritella
           sp. PE36]
          Length = 224

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 76/139 (54%), Gaps = 8/139 (5%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F S  +ALS   A++ ++ +R+ + +V +GQ + A ALG+   +    + LPQA R
Sbjct: 86  ISP-FWSGVVALSLIFASYASQTLRAAIQSVSKGQQQGAQALGMGPVRCFLRITLPQAWR 144

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM- 380
             +P L +Q++ LLK+++L   +G  DL+     +   T +    ++    IYL ++++ 
Sbjct: 145 LALPGLGNQWMVLLKDTALVSLIGVTDLMKQADLLSGSTYKPFTFLVAAAAIYLIITLIS 204

Query: 381 ------IALFMNRLNAKIA 393
                 +  ++NR +A +A
Sbjct: 205 QWLLKHLDNYINRFDAGVA 223


>gi|186476915|ref|YP_001858385.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193374|gb|ACC71339.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 229

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 224 ISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAA 279
           I T LI G+P LVL+ L +   Q+  +       + +G   +  + F++    L     A
Sbjct: 52  IYTTLIRGVPDLVLMLLLFYSIQIWLNNLT----DMLGWDQIDIDPFVAGVAVLGFIYGA 107

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R   +AVPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  ++K ++
Sbjct: 108 YFTETFRGAFLAVPRGQLEAGAAYGMTGWQVFSRIMFPQMMRFALPGIGNNWQVMVKATA 167

Query: 340 LAVAVGFADLVS 351
           L   +G AD+V 
Sbjct: 168 LVSIIGLADVVK 179


>gi|296274365|ref|YP_003656996.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098539|gb|ADG94489.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 265

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 19/183 (10%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-----HFHEKTGK 217
           +V+ F     N   +F   ++    + F+  F++ I++S FA  LS        + +  K
Sbjct: 37  VVITFYFMFKNVSYTFNWDSVYEYRQKFIDGFIMTIIISFFALILSFIIGLFFTYAQNSK 96

Query: 218 ALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
            L L + S F   +I G P LV I + + + F   +  +  +I G+          I L+
Sbjct: 97  LLVLRFFSRFYIEIIRGTPLLVQILIFFYV-FANNLGFENRYIVGT----------IILA 145

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +  A++ EI+R  + ++   Q E  ++LG+T+ +  R ++ PQA   ++P LT Q+ ++
Sbjct: 146 LFAGAYVCEIIRGAIESIEIEQFETGLSLGMTNYQIYRYIIFPQAFNRMLPALTGQFASI 205

Query: 335 LKN 337
           +K+
Sbjct: 206 IKD 208


>gi|241113570|ref|YP_002973405.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861778|gb|ACS59444.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 22/213 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V +F+ G+       RLSR F  +   AL   YI  F      T + + L
Sbjct: 21  LTIMGSALALVMAFLAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 67

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P         G T++P   +  +AL     A+ AE+VR  + AV R Q EA 
Sbjct: 68  -FWVYFVLP-------FAGLTLTP-LQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEAC 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+      +  QT
Sbjct: 119 IALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQT 178

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +      + +Y  ++  I+  M  L  ++A
Sbjct: 179 GNTLVPFATILILYFLMASAISATMRWLERRMA 211


>gi|163744468|ref|ZP_02151828.1| polar amino acid uptake family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161381286|gb|EDQ05695.1| polar amino acid uptake family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 256

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 6/169 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  Q  +I GS + P     +    +AL+   A +  E
Sbjct: 88  VIRGTPLLLQIWLLY--YGLGSLFPQIPWIRGSELWPYLRQAWPYAVLALTLSYAGYEGE 145

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R    +V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   
Sbjct: 146 VMRGAFSSVNKGQLEAANAFGMPRFTMFRRIWLPQAIRNVLPTLGGETILQLKATPLVAT 205

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +L +V   + + T    E +++    Y+ ++ +IAL   R   ++
Sbjct: 206 ITVVELYAVSSRVRSDTFIVYEPLILLAVFYMIIAGIIALMFRRFENRV 254


>gi|330957237|gb|EGH57497.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 231

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 68/126 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      ++ T +A    ++   +YL L+++  + M
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIAVSFTKEAFTFYMVAAIMYLGLTVLAMIGM 215

Query: 386 NRLNAK 391
             L  +
Sbjct: 216 YFLEKR 221


>gi|320095185|ref|ZP_08026891.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977890|gb|EFW09527.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 292

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 68/120 (56%), Gaps = 9/120 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV++   Y + F  P L   + I      P  +   IAL    ++++AE++R+GL 
Sbjct: 131 GIPFLVVL---YLVGFGIPALNPNDRI------PTAVLGTIALVLTYSSYVAEVLRAGLE 181

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++   Q  AA +LGLTH +  R++++PQA+R + P L + ++++ K+  L   +G  D +
Sbjct: 182 SIHPSQRYAARSLGLTHGQTLRMIIVPQAIRKVTPALMNDFISMQKDVGLISVLGAVDAI 241


>gi|259907903|ref|YP_002648259.1| Histidine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224963525|emb|CAX55015.1| Histidine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283477780|emb|CAY73696.1| Histidine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
 gi|310768186|gb|ADP13136.1| Histidine transport system permease protein [Erwinia sp. Ejp617]
          Length = 238

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  E+    + AVP G++EAA A G +  K  R +++P A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEVFAGAIRAVPHGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ V   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKVARDINSATYQPFIAFGIAAVLYLIISYVLISLF 221


>gi|237808337|ref|YP_002892777.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500598|gb|ACQ93191.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKPVL 251
           SF+LG++        ++    K  + L  +Y  T LI G+P LVL+ L  Y L      +
Sbjct: 27  SFLLGLI-----GAAAKSSQSKLARLLSGIY--TTLIRGVPDLVLMLLIFYGLQIVVNGI 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +   I    + P F +  I +     A+  E  R   + VP+GQ+EA +A G +  +A 
Sbjct: 80  TESLGIAQLNIDP-FAAGVITIGFIYGAYFTETFRGAYLMVPKGQLEAGVAYGFSPWQAF 138

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R +L PQ MR  +P + + +   LK ++L   +G +D+V         T Q     ++  
Sbjct: 139 RYILFPQLMRFALPGIANNWQVTLKATALVSIIGLSDVVKATQNAGKGTYQFFYFTIVAA 198

Query: 372 FIYL---SLSIMIALFMNR 387
            +YL   ++S ++ L++ R
Sbjct: 199 VVYLIFTTVSNLVLLWLER 217


>gi|89898981|ref|YP_521452.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343718|gb|ABD67921.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 220

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 64/115 (55%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+  +A+     A+  EIVR+GL   PRGQ+EAA++L LT  +    V+LP A+  I P 
Sbjct: 90  MASVLAMVLNLGAYACEIVRAGLQTTPRGQLEAAMSLALTPWQTFSRVVLPPALARIWPA 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           L SQ + ++  S++   +   +L      I ++T ++ E  +I   IYL L+I +
Sbjct: 150 LVSQIIIVMLGSAVCGQISAEELSQAANLISSRTFRSFESYIIVTGIYLLLAIAL 204


>gi|15645555|ref|NP_207731.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter
           pylori 26695]
 gi|2314077|gb|AAD07984.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter
           pylori 26695]
          Length = 237

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++F   +     +HF  K   A    Y+S  +I G P LV I + +   +
Sbjct: 44  IISFILGLCIAVFVALIKIAPPKHFIHKALLAGVNFYVS--IIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233


>gi|319782220|ref|YP_004141696.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168108|gb|ADV11646.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  I L  +   + AE+ R+G+  VPRGQ EAA A  L+  +    +++PQA+  +
Sbjct: 86  PPLVAGVIGLGLHYGTYTAEVYRAGIDNVPRGQWEAAKACNLSASQTWTHIIIPQAIPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI--WMFIYLSL-SIM 380
           IP L + ++ + K + L  A+   +L++   ++ N   + IE I +    F+ +SL S++
Sbjct: 146 IPALANYFIAMFKETPLLSAITVLELMNQAKSVANTYYRYIEPITLVGAFFLVISLFSVV 205

Query: 381 IALFMNRLNAKI 392
           +  ++ R   KI
Sbjct: 206 LLRWLERRYGKI 217


>gi|302337320|ref|YP_003802526.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634505|gb|ADK79932.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 220

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 64/129 (49%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +AL+    +++ EI+R GL  + R Q+EA+ ++GL   +   LV++PQ +  +
Sbjct: 87  PPLTTAVVALAINHGSYMTEIMRGGLNTIRREQIEASASIGLNIFQQYSLVIIPQTIMEV 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P +  Q + L+K++S+   +G ++L  +G  I   T     +       Y  L  +  +
Sbjct: 147 APSIVGQTILLVKDTSIISVIGISELTRIGRQITMLTNSPFLVFFYVAVFYYVLCFLFQM 206

Query: 384 FMNRLNAKI 392
             N   AK+
Sbjct: 207 LSNWSEAKV 215


>gi|300936885|ref|ZP_07151772.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300457996|gb|EFK21489.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 238

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA  V   DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTVTVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|146307937|ref|YP_001188402.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145576138|gb|ABP85670.1| L-ornithine ABC transporter membrane protein / L-arginine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 229

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 9/175 (5%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG   +I    ++P F++    +     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDIVNRVAPLLGYDEYI---DINP-FVAGVFTMGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA  A G++  +    +L+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQGEAGAAYGMSGMQVFFRILVPQMIRFAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            VG  D++       + T +     L    +YL L+ +  L +  L  + ++  K
Sbjct: 171 VVGLQDMMFKAKNAADATREPFTFYLAVAALYLVLTSVSLLALRFLEKRYSVGTK 225


>gi|23099528|ref|NP_692994.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22777758|dbj|BAC14029.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 185

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 42/63 (66%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F +  I L+ ++ A+IAEI+R  + +V +GQ EA ++LG++  K  R ++LPQA R  +
Sbjct: 89  QFWAGAIGLAFHSGAYIAEIIRGAIQSVDKGQREAGLSLGMSKGKTMRRIILPQAFRRAV 148

Query: 325 PPL 327
           P L
Sbjct: 149 PSL 151


>gi|307131835|ref|YP_003883851.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Dickeya dadantii 3937]
 gi|306529364|gb|ADM99294.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Dickeya dadantii 3937]
          Length = 229

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      L +   +    + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQMVLNSLTETLGLDQIDIDPLAAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVPRGQ+EAA+A G T  K  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAYLAVPRGQIEAAVAFGFTPMKVFRRIMFPSMMRFALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G +D++ 
Sbjct: 172 GLSDVIK 178


>gi|325267601|ref|ZP_08134253.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Kingella denitrificans ATCC 33394]
 gi|324980951|gb|EGC16611.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Kingella denitrificans ATCC 33394]
          Length = 222

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 5/121 (4%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+EA +ALGL  R+    +  PQ +R ++P   + +  ++
Sbjct: 99  WGTAEMGDLVRGALQSIDKHQIEAGLALGLNRRQVFLYIEAPQGLRRVLPSAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFMNRLNA 390
           K SSLA  +G  ++V VG  II  +        +W++     +Y  +   ++L  NRL  
Sbjct: 159 KTSSLAALIGVIEVVKVGQQIIENSLLTQPNASLWVYGLIFILYFIVCYPLSLVANRLEK 218

Query: 391 K 391
           K
Sbjct: 219 K 219


>gi|319744241|gb|EFV96606.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 267

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 10/174 (5%)

Query: 231 GLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y     F K +  Q+ F       P  +    A +   AA+ +E +R+ 
Sbjct: 87  GTPILVQLMLSYYGIPLFLKFLNQQYGFDWNINAIPASVFAITAFAFNEAAYTSETIRAA 146

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG--- 345
           +++V +G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA   G   
Sbjct: 147 ILSVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTLIGLTKGTSLAFNAGIVE 206

Query: 346 -FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            FA    +GG+      + I + L    +Y ++S +I    N +  K+A+K  +
Sbjct: 207 MFAQAQIMGGSDYRYFERYISVAL----VYWAVSFLIEQLGNAIERKMAIKAPR 256


>gi|213859807|ref|ZP_03385511.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 180

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 52  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 111

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 112 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLF 166


>gi|125624393|ref|YP_001032876.1| putative amino-acid ABC transporter permease protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124493201|emb|CAL98166.1| putative amino-acid ABC transporter permease protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300071180|gb|ADJ60580.1| putative amino-acid ABC transporter permease protein [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 295

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 68/132 (51%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + + +A +    A+ +E +R+ + +V +GQ+EAA +LG+T+ +    V LP+A    
Sbjct: 142 PAMLFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVA 201

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
             PL +  + LLK++SLA   G  ++ +    I   T +  E  L    +Y  + I+  +
Sbjct: 202 TAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVYWPICIIFEI 261

Query: 384 FMNRLNAKIALK 395
            +  L  K+ ++
Sbjct: 262 LIRALERKLDVR 273


>gi|269967642|ref|ZP_06181692.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269827729|gb|EEZ82013.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 172

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 58/105 (55%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++     R ++LP A+R  +P  +++ + +L 
Sbjct: 49  TSAYTAEIIRGAINGLPKGEVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLH 108

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ MI
Sbjct: 109 GSAVAGIVTIMDLTGAARLVNSRYYAPFESFLTAGLFYMALTFMI 153


>gi|213971202|ref|ZP_03399320.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301382331|ref|ZP_07230749.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302132165|ref|ZP_07258155.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213924071|gb|EEB57648.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331017119|gb|EGH97175.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 231

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 5/171 (2%)

Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSL 269
           KT    PL ++    + L+ G+P L+ + L Y    +    LG++  I    +S  F + 
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNGMRALGEWLGIPNLALS-AFAAG 99

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L +
Sbjct: 100 VIALGLCFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGN 159

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++
Sbjct: 160 LFMILMKDTALVSVIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVL 210


>gi|37676943|ref|NP_937339.1| arginine transporter permease subunit ArtM [Vibrio vulnificus
           YJ016]
 gi|37201487|dbj|BAC97309.1| arginine ABC transporter, permease protein [Vibrio vulnificus
           YJ016]
          Length = 222

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF  I  S V      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLIYY----GP--GQFEAIRDSFVWQWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+ ++  T  VLLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-NKLVTLKVLLPYALRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKK 215


>gi|325836786|ref|ZP_08166253.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|325491164|gb|EGC93453.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 24/139 (17%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L +    Y       VLG   F+GGS                   
Sbjct: 64  PLLIQLFFLYFGLPKLGIFLSSYACG----VLG-LTFLGGS------------------- 99

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE  RSGL ++P  QME+ ++LGLT  +    ++ PQA+   +P  ++  + L+K +S
Sbjct: 100 YMAEAFRSGLESIPDIQMESGLSLGLTKWQVLCYIIFPQAVAVSLPAFSANVIFLIKETS 159

Query: 340 LAVAVGFADLVSVGGTIIN 358
           +   V  ADL+ V   +I 
Sbjct: 160 VFSVVALADLMYVAKGLIG 178


>gi|325063357|gb|ADY67047.1| amino acid ABC transporter, permease protein [Agrobacterium sp.
           H13-3]
          Length = 216

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 58/103 (56%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F +EI R+GL ++P+G+ EAA  LGL+  +    + +PQA R+++P L  +   L+KNSS
Sbjct: 98  FQSEIYRAGLQSIPKGEREAAAMLGLSAGRTFLHIEVPQAFRTMLPALVGEIQALVKNSS 157

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           L   +   DL          T + ++  L  + +Y+++  ++A
Sbjct: 158 LVSVIAVTDLTRRAQQYAATTFRPLDAYLSALLLYVAVGALLA 200


>gi|117618504|ref|YP_855199.1| arginine ABC transporter, permease protein ArtQ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117559911|gb|ABK36859.1| arginine ABC transporter, permease protein ArtQ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 216

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 90/168 (53%), Gaps = 27/168 (16%)

Query: 193 SFVLGIVLSLF--ATRLSRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKY----QL 244
           S V G+VL+L   A  LS+       +AL  P+  ++T LI GLP L+++   Y    Q+
Sbjct: 19  SLVGGMVLALAFSAAELSKQ------RALVWPVATLTT-LIRGLPELLVVLFIYFGSTQV 71

Query: 245 HFDKPVLGQFNFIGGSTV--SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            F          I G  V  SP F    +ALS   A++  + +R+ L AVP GQ  AA+A
Sbjct: 72  LF---------LITGEYVEFSP-FACGVLALSLLFASYATQTLRAALNAVPAGQRLAALA 121

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           LGL  R     ++LPQA R  +P L +Q+L LLK+++L   +G  +++
Sbjct: 122 LGLGKRHIFFRIVLPQAWRHALPGLGNQWLVLLKDTALVSLIGVNEMM 169


>gi|225856390|ref|YP_002737901.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|225724420|gb|ACO20272.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
          Length = 206

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 8/136 (5%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L    ++++A
Sbjct: 24  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPLIGIVLSSEVCAT-LGLVFLGSSYMA 82

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA   ++P  ++  + L+K +S+  
Sbjct: 83  ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVVLPSFSANVIFLIKKTSVFS 142

Query: 343 AVGFADLVSVGGTIIN 358
           AV  ADL+ V   +I 
Sbjct: 143 AVALADLMYVAKDLIG 158


>gi|116248725|ref|YP_764566.1| putative permease component of ABC transporter protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253375|emb|CAK11763.1| putative permease component of ABC transporter protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 221

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 22/213 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V +F+ G+       RLSR F  +   AL   YI  F      T + + L
Sbjct: 23  LTIMGSALALVMAFLAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 69

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P         G T++P   +  +AL     A+ AE+VR  + AV R Q EA 
Sbjct: 70  -FWVYFVLP-------FAGLTLTP-LQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEAC 120

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+      +  QT
Sbjct: 121 IALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQT 180

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +      + +Y  ++  I+  M  L  ++A
Sbjct: 181 GNTLVPFATILILYFLMASAISATMRWLERRMA 213


>gi|57242451|ref|ZP_00370389.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           upsaliensis RM3195]
 gi|57016736|gb|EAL53519.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           upsaliensis RM3195]
          Length = 218

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S + +  + ++VRS L ++P+ Q E+A ALGLT  +A   +++PQA+R + P   + 
Sbjct: 92  IVFSIWGSFEMMDLVRSSLQSIPKHQYESAAALGLTPLQAYIYIIIPQALRRLTPLSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEII--LIWMFIYLSLSIMIALFM 385
              ++K+++ A  +G  +LV VG  II   NQ   A  +I  LI+M +Y  +   ++L+ 
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNQNDFAPFVIYGLIFM-LYFVICYPVSLYA 210

Query: 386 NRLNAK 391
             L  K
Sbjct: 211 RTLEKK 216


>gi|309777347|ref|ZP_07672308.1| amino acid ABC transporter, permease protein [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308914888|gb|EFP60667.1| amino acid ABC transporter, permease protein [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 213

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 35/208 (16%)

Query: 193 SFVLGIVLSLFATRLSRH--------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           SFVL   L +   RLSR+        F+    +  PLL    F+ FGLP L        +
Sbjct: 29  SFVLA--LPMVYIRLSRNAVVSSIVRFYIYIMRGTPLLLQLMFVYFGLPYL-------GI 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D+       F                L  YTA F  EI+R G+ ++  GQ EAA  LG
Sbjct: 80  RLDRMTAAILAF----------------LLNYTAYF-TEILRGGVQSIDEGQKEAAKILG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            ++      +LLPQA+R+ IP   ++ L LLK++ L   +G  +L+             +
Sbjct: 123 YSNAYTFLHILLPQALRNCIPSFINESLTLLKDTCLVSILGIDELLRYAKIAAGTYATGL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I + + IYL L++ I+  +N L  ++
Sbjct: 183 PFIYVGV-IYLVLNMPISRGLNYLEKRL 209


>gi|238762251|ref|ZP_04623223.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
 gi|238699598|gb|EEP92343.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
          Length = 222

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 4/117 (3%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++SP   +  I L    ++F AEIVR  ++ V +GQ +A  AL      A R ++LPQ
Sbjct: 80  GISISP-MTTAVIGLGLNFSSFGAEIVRGAIVNVSQGQRDALRALDFPPLMAFRRIILPQ 138

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           A+  ++PPL +  + LLK++S+   +  +DL   G ++I   G   +  LIW  + L
Sbjct: 139 ALPFMLPPLGNLLVELLKSTSVVSLITLSDLTFAGASLITTLG---DQTLIWSMVLL 192


>gi|229817170|ref|ZP_04447452.1| hypothetical protein BIFANG_02429 [Bifidobacterium angulatum DSM
           20098]
 gi|229784959|gb|EEP21073.1| hypothetical protein BIFANG_02429 [Bifidobacterium angulatum DSM
           20098]
          Length = 224

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 25/155 (16%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A ++ R + E + +  PLL    FL FGLP L ++        +   +    F+GGS   
Sbjct: 56  ARQIVRVYIEIS-RNTPLLVQLYFLFFGLPKLGIV-----WSAETCAIVGLGFLGGS--- 106

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                           ++AE +R+GL AVP  Q E A  LG T  ++   V+LPQA+   
Sbjct: 107 ----------------YMAEAMRAGLQAVPEVQRETAYVLGFTPMQSLTRVVLPQAVSGA 150

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           IP + +  + L K SS+  A+  AD++ +   +I 
Sbjct: 151 IPGIVANVIFLFKESSVVSAIALADVMYMAKDLIG 185



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T +++  G+I A ++G +     L+   +   I RVY+E+ RN P LV 
Sbjct: 16  YAPFFVKGMEMTLFISIIGIILALVVGLICAGVELARVPVARQIVRVYIEISRNTPLLVQ 75

Query: 145 IFFLY 149
           ++FL+
Sbjct: 76  LYFLF 80


>gi|315612796|ref|ZP_07887707.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315314906|gb|EFU62947.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 225

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++         +H +  + L   Y+    I  +P LVL+ + Y       +
Sbjct: 38  IFGTVMGIIMT---------YHSRVIRFLTRFYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNFQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|332040174|gb|EGI76555.1| polar amino acid abc transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 220

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 53/77 (68%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S+ + L+   +AF A+ +RSG+  +P GQ+EAA++LG+   +    ++LPQA+R+++ P+
Sbjct: 90  SVILTLTLVCSAFTADYLRSGINTIPGGQIEAALSLGMRPMQIIFALVLPQALRAVVQPM 149

Query: 328 TSQYLNLLKNSSLAVAV 344
           TS  + L+ ++SLA  V
Sbjct: 150 TSLLIALMLSTSLASQV 166


>gi|330951201|gb|EGH51461.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 215

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 70/122 (57%), Gaps = 4/122 (3%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP + +  +AL+ +T+A++AEI R  + ++ +G+ EA+ +L LT  +  R V+LPQ
Sbjct: 79  GMNISP-WAAAALALTLFTSAYLAEIWRGCVESISKGRWEASASLALTPFEQMRYVILPQ 137

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  + P     + ++K +++   +GF +L   G  + N T    E  +++ F+ L   
Sbjct: 138 ALRIAVAPTVGFSVQVVKGTAVTSIIGFTELTKTGSMLANAT---FEPFMVYGFVALGYF 194

Query: 379 IM 380
           I+
Sbjct: 195 IL 196


>gi|257784251|ref|YP_003179468.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
 gi|257472758|gb|ACV50877.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
          Length = 225

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 17/168 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S  LGI++ LF T      + K  + L  +Y+    +  +P LVL+   + + F    
Sbjct: 32  VLSIPLGILVGLFMTS-----NNKIVRTLLRVYLEIVRV--MPQLVLL---FVVFFGTSE 81

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               NF G         +  +  + + AA + ++VR  L ++P  Q + A  LGL+ ++ 
Sbjct: 82  WFDVNFDG-------IEASIVVFTFWGAAELGDLVRGALESIPASQYDGAFVLGLSRQQT 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              V+LPQA+R ++PP  +    ++K +SL   +G  +L+ VG  I +
Sbjct: 135 FFQVILPQALRRLLPPAINLITRMIKTTSLCNLIGVVELLRVGSQITD 182


>gi|300718267|ref|YP_003743070.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia
           billingiae Eb661]
 gi|299064103|emb|CAX61223.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia
           billingiae Eb661]
          Length = 236

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  ++LS +  A   E  RSG  AVP+  +EAA +LG +       V  P A R  +P
Sbjct: 103 FASATVSLSLFGGALCIEAFRSGFDAVPKATLEAARSLGYSRWGLFVHVQAPIASRICLP 162

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           PLT+   NL K +S A  +   +L+   G I N T + +E
Sbjct: 163 PLTNVLTNLFKTTSQASVITVPELMYAAGQIYNDTFRTLE 202



 Score = 39.7 bits (91), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 6/71 (8%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI---CRVYVEVFRN 138
           D +Y   +L G V T  LA    + A +IG    AG L     +AW+     ++VE+FRN
Sbjct: 11  DPTYQQWLLQGVVQTLELAALSSVIAIVIGL---AGALGLTFKIAWLDALIELFVELFRN 67

Query: 139 IPPLVVIFFLY 149
            PPL+ + F Y
Sbjct: 68  TPPLLQMLFFY 78


>gi|294085011|ref|YP_003551771.1| polar amino acid uptake family ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664586|gb|ADE39687.1| polar amino acid uptake family ABC transporter, permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 250

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 56/103 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+LS +  AF  EI R+G+ AVP    EA+ +LG T  +  R V+LP A R  +P L + 
Sbjct: 121 ISLSFFAGAFNVEIFRAGIEAVPESTKEASESLGFTRGQTFRYVVLPLAARVSLPALNNN 180

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
            +NL+K ++ A  +   +L+     I N    A+   ++ +F+
Sbjct: 181 LVNLVKTTTQAFGIAVPELLYQSVVIWNDYPSALYPTMLLVFV 223


>gi|227499009|ref|ZP_03929146.1| ABC amino acid transporter permease [Acidaminococcus sp. D21]
 gi|226904458|gb|EEH90376.1| ABC amino acid transporter permease [Acidaminococcus sp. D21]
          Length = 229

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + + +  + + A + AEI+R  L A+  G+ EAA +LG+T  +  R ++LPQA    
Sbjct: 86  PPLLFVLVIFALHVAGYGAEILRGSLAAIQPGEKEAAASLGMTDAQIYRRIVLPQAFVLS 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           IPPL ++ ++ LK ++L   VG  D++
Sbjct: 146 IPPLVNEVISTLKGTALIFNVGIVDVM 172


>gi|329121396|ref|ZP_08250021.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Dialister micraerophilus DSM 19965]
 gi|327469686|gb|EGF15153.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Dialister micraerophilus DSM 19965]
          Length = 218

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 43/219 (19%)

Query: 185 TNAKIFVFSFVLGIVLSLFAT--RLSR--------HFHEKTGKALPLLYISTFLIFGLPT 234
           T  +I  F  VL ++  LF +  R  +         F+ +  +  PLL    FL FGLP 
Sbjct: 19  TTLRIAFFGIVLSLLFGLFISVIRYKKVPIISQICKFYIELSRNTPLLVQLFFLYFGLP- 77

Query: 235 LVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                 K  +H   +   L    F+G                   A+++AE  RSGL +V
Sbjct: 78  ------KAGIHISGENCALSGLVFLG-------------------ASYMAETFRSGLESV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q+E+A ALG+   +  R V++PQA+   IP + +  + L+K +S+       DL+ V
Sbjct: 113 AKSQIESAAALGMGEYQIFRFVIIPQAVSVSIPSVCANIIFLIKETSVFSVCAIPDLMYV 172

Query: 353 GGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNR 387
              +I    +T + + +++I ++ I L +SI IA  + R
Sbjct: 173 AKDLIGLYYKTDETLFMLVIAYLIILLPVSI-IAYLLER 210



 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + T  +AF G++ + + G  +   R     +++ IC+ Y+E+ RN P LV +FFLY
Sbjct: 18  LTTLRIAFFGIVLSLLFGLFISVIRYKKVPIISQICKFYIELSRNTPLLVQLFFLY 73


>gi|239833273|ref|ZP_04681601.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821336|gb|EEQ92905.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 241

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 5/123 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFN--FIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRS 287
           G+P L++I L Y       VL Q    F G   VS P F++  +A+   + A+ AE+ R 
Sbjct: 71  GIPDLLVIYLFY--FGSSAVLSQIGALFGGHGFVSAPIFITGALAIGVVSGAYQAEVYRG 128

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++A+P+G++EAA A G+      R +++PQA R  IP + + +  +LK S+L   VG  
Sbjct: 129 AVLALPKGEIEAAKAYGMPTHLLFRRIMVPQAARFAIPGIGNVWQLVLKESALISVVGLV 188

Query: 348 DLV 350
           +L+
Sbjct: 189 ELM 191


>gi|237808390|ref|YP_002892830.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500651|gb|ACQ93244.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 239

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 9/169 (5%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T++ +   F+   V+G+  +L     SR          P+L + T ++  +P L+LI   
Sbjct: 28  TLEISFGAFLAGIVIGLCCALGKLNGSRSLA-------PVLNLYTTVVRAIPELILIIAL 80

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           Y    D  +    N +G  +V    F +  + L     A+  E++R  ++A+P GQ+EA 
Sbjct: 81  YYAGTDS-LNAILNALGFESVEINGFATAILVLGIVQGAYATEVIRGAILAIPTGQIEAG 139

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A G+      R ++LP  M + +P L++ + ++ K+S+L   +G+ +L
Sbjct: 140 KAFGMPATMRFRRIILPAMMPTALPGLSNLWASVTKDSALIAVLGYQEL 188



 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 20/150 (13%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            + TA+L G V T  ++F   +   +IG     G+L+ ++ +A +  +Y  V R IP L+
Sbjct: 16  GWGTALLKGTVTTLEISFGAFLAGIVIGLCCALGKLNGSRSLAPVLNLYTTVVRAIPELI 75

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +I  LY +    L              LN   L F ++ ++  A   +   VLGIV   +
Sbjct: 76  LIIALYYAGTDSL-----------NAILN--ALGFESVEINGFATAIL---VLGIVQGAY 119

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           AT + R        A+P   I     FG+P
Sbjct: 120 ATEVIRGAI----LAIPTGQIEAGKAFGMP 145


>gi|294629522|ref|ZP_06708082.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. e14]
 gi|292832855|gb|EFF91204.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. e14]
          Length = 344

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 40/179 (22%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQL 244
           V SF LG+V +L     +R      G      +  PLL    FL + LP       ++ L
Sbjct: 159 VISFALGLVWALLMRAPTRWVRWPVGAVTEFVRNTPLLVQLFFLFYVLP-------EWGL 211

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F     G F                 A+  + + +  ++ R+G+ AVP GQ EAA AL 
Sbjct: 212 TFSALTTGVF-----------------AIGLHYSTYTMQVYRAGIEAVPAGQWEAATALN 254

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           L  R+    V+LPQA+R ++P L +  +++LK++ + +A+          T++   GQA
Sbjct: 255 LPRRRTWTAVILPQAIRRVVPALGNYVISMLKDTPMLMAI----------TVLEMLGQA 303


>gi|255655794|ref|ZP_05401203.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
 gi|296450968|ref|ZP_06892715.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296879066|ref|ZP_06903062.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296260186|gb|EFH07034.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296429939|gb|EFH15790.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 203

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 49/82 (59%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ AEI R G+ ++ RGQ EA+  LG       + ++ PQ  + I+ P++++ + L+K+
Sbjct: 86  AAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRIIFPQVFKRILAPISNEVITLVKD 145

Query: 338 SSLAVAVGFADLVSVGGTIINQ 359
           +SL   +G  D++ +    +N+
Sbjct: 146 TSLVYILGLNDILRISQIAMNR 167


>gi|254229000|ref|ZP_04922421.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio sp. Ex25]
 gi|262394741|ref|YP_003286595.1| histidine ABC transporter permease HisM [Vibrio sp. Ex25]
 gi|151938468|gb|EDN57305.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio sp. Ex25]
 gi|262338335|gb|ACY52130.1| histidine ABC transporter permease protein HisM [Vibrio sp. Ex25]
          Length = 225

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 58/105 (55%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++     R ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ MI
Sbjct: 162 GSAVAGIVTIMDLTGAARLVNSRYYAPFESFLTAGLFYMALTFMI 206


>gi|209965981|ref|YP_002298896.1| amino acid ABC transporter, permease protein [Rhodospirillum
           centenum SW]
 gi|209959447|gb|ACJ00084.1| amino acid ABC transporter, permease protein [Rhodospirillum
           centenum SW]
          Length = 236

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 14/170 (8%)

Query: 189 IFVFSFVLGIVLSLFAT--RLSRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKY-- 242
           + V SF  G+VL   A   RL        G AL   +  + T +I G+P L++I L +  
Sbjct: 26  VAVLSFAGGLVLGSLAAAARLG-------GNALLRGVAEVYTTVIRGVPALLVIWLLFFG 78

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F   V G F + GG      F     A++  + A+ AE++R  + AVP GQ EAA A
Sbjct: 79  GSGFVSWVAGAFGY-GGRIELSAFAVGVAAVATVSGAYAAEVIRGAVQAVPSGQTEAARA 137

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           LG+      R +++PQA+R  +P L + +   LK+++L      A+L+ V
Sbjct: 138 LGMHRGLILRRIVVPQALRYALPGLGNVWQMTLKDTALVSVTALAELMRV 187



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L+F+G +   ++G+L  A RL  N L+  +  VY  V R +P L+VI+ L+
Sbjct: 29  LSFAGGL---VLGSLAAAARLGGNALLRGVAEVYTTVIRGVPALLVIWLLF 76


>gi|289168269|ref|YP_003446538.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
 gi|288907836|emb|CBJ22676.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
          Length = 226

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL AV + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAVSQTQQEIGLAIGLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV  ADL+ V   +I    +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 163 AVALADLMYVAKDLIGLYYETDIALAMLVVAYLIMLLPISLVFSWIERRLR 213


>gi|295676192|ref|YP_003604716.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295436035|gb|ADG15205.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 229

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 14/160 (8%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI  +P LVL+ L  Y +        D   L QF+      + P F +  + L     
Sbjct: 54  TTLIRSVPDLVLMLLLFYSIQMAVNDVTDALDLPQFD------IDP-FAAGVLTLGFIYG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K +
Sbjct: 107 AYFTETFRGAFLAVPRGQLEAGSAYGMSGVRVFTRILFPQMMRFALPGIGNNWQVLVKAT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +L   +G AD+V         T      I++   IYL+++
Sbjct: 167 ALVSIIGLADVVKAAQDAGKSTFNMFFFIMVAALIYLAIT 206


>gi|126667083|ref|ZP_01738058.1| ABC transporter, membrane spanning protein (amino acid)
           [Marinobacter sp. ELB17]
 gi|126628489|gb|EAZ99111.1| ABC transporter, membrane spanning protein (amino acid)
           [Marinobacter sp. ELB17]
          Length = 217

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 255 NFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F+G  G  + P F++  I LS YT AF++E+ RSG  +V +    +A +LG+++ +   
Sbjct: 77  TFVGAMGYPLDP-FVAGSIILSLYTMAFMSEVFRSGFESVHQSMRTSARSLGMSYWQTIF 135

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            + LP  +R++ P      L+++K+S+L   +G+ +L+     +I++T Q + I++
Sbjct: 136 YIRLPIGLRAVFPSWLGVALSVIKDSALVSVIGYMELLRTSDQLISRTQQPLMILI 191


>gi|125547633|gb|EAY93455.1| hypothetical protein OsI_15254 [Oryza sativa Indica Group]
          Length = 434

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 72  LALTLNTCAYTTEIFAGAIRSVPHGEIEAANAYGFSRFKMYRCIILPSALRTALPAYSNE 131

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 132 VILMLHSTALAFTATVPDLLKIARDINAATYQPFYAFGIAAVLYLIISYVLISLF 186


>gi|330874239|gb|EGH08388.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330968063|gb|EGH68323.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 231

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 67/126 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++  + M
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGM 215

Query: 386 NRLNAK 391
             L  +
Sbjct: 216 YFLEKR 221


>gi|322516241|ref|ZP_08069173.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322125305|gb|EFX96670.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 225

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 56/106 (52%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I  + +  A + ++VR  + ++PR Q E+   LGLT+ +    V++PQ +R ++P 
Sbjct: 93  LSAIIVFTLWGTAEMGDLVRGSITSLPRHQFESGRTLGLTNGQLYTYVIIPQVLRRLLPQ 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
             +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 153 AINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|50084481|ref|YP_045991.1| amino acid ABC transporter ATP-binding protein [Acinetobacter sp.
           ADP1]
 gi|49530457|emb|CAG68169.1| putative amino acid transporter (ABC superfamily, atp_bind and
           membrane) [Acinetobacter sp. ADP1]
          Length = 509

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 20/137 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +++PL+ +  F ++ LP +  I         +P+LG   FI G           I+++  
Sbjct: 65  RSIPLMVLLVF-VYNLPQMFPIT--------QPLLG-VPFIAG----------LISMTVT 104

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEI R GL++V +GQ EA  AL        RL+++PQA R  +P L ++++ ++K
Sbjct: 105 EAAYMAEIHRGGLLSVTKGQNEAGHALSFGFFGIQRLIVIPQAFRIALPTLINEFITVIK 164

Query: 337 NSSLAVAVGFADLVSVG 353
            SS+   +   +L+  G
Sbjct: 165 LSSILSVISLPELLLTG 181


>gi|157165596|ref|YP_001466616.1| 6,7-dimethyl-8-ribityllumazine synthase [Campylobacter concisus
           13826]
 gi|112800728|gb|EAT98072.1| ABC-type amino acid transport system, permease component
           [Campylobacter concisus 13826]
          Length = 217

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 29/177 (16%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL +GLP L +        F   V G  +F+GGS +S  F             
Sbjct: 64  PLLIQLFFLYYGLPKLGV----SMSGFTCAVAG-LSFLGGSYMSESF------------- 105

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
                 R G  AV + Q+EA +++ L+  +  R V+LPQA    +P +++  + LLK +S
Sbjct: 106 ------RLGFEAVRKSQIEAGLSIALSKNQLLRYVILPQAFSVALPSISANVIFLLKETS 159

Query: 340 LAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRL-NAK 391
           +   V  ADLV V   +I    +T +A+ +++I ++ I L +S+ ++    R+ NA+
Sbjct: 160 IVSIVALADLVYVAKDLIGLYYKTDEALFMLVISYLVIILPVSLALSYVEKRVRNAR 216



 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           V T  +AF G++ + +IG    A +    K ++ +   YVE+ RN P L+ +FFLY
Sbjct: 18  VLTIEIAFLGIVFSILIGIFCMAVKFYKLKFLSKLVDCYVELSRNTPLLIQLFFLY 73


>gi|46578805|ref|YP_009613.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603588|ref|YP_967988.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|46448217|gb|AAS94872.1| amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563817|gb|ABM29561.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232668|gb|ADP85522.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 224

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 66/118 (55%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +E VR  L+++ +GQ++AA ALG +  K    +++PQA+R  +P   ++ + L+K
Sbjct: 99  SAAYNSEYVRGALLSIRQGQLKAAQALGFSKLKTVLFIVVPQAVRRALPGCGNEIIYLIK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSLA  +   +L   G  +  ++ +  E+ L     YL L  + +  ++R+    ++
Sbjct: 159 YSSLAYVITCIELTGEGKVVAARSFRFTEVFLFVGAYYLFLVTLASWILHRVEQHFSI 216


>gi|307708869|ref|ZP_07645329.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
 gi|307620205|gb|EFN99321.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
          Length = 226

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 36/208 (17%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVL 251
           SF+LG+++S+      RH+                    +P L  +A  Y +L  + P+L
Sbjct: 31  SFLLGLIVSII-----RHYQ-------------------IPVLAQVATAYIELSRNTPLL 66

Query: 252 GQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            Q  F+       G  +S E  +  + L     +++AE  RSGL AV + Q E  +A+GL
Sbjct: 67  IQLFFLYFGLPRVGIVLSSEVCAT-LGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAIGL 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQ 362
           T  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    +T  
Sbjct: 126 TPIQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYETDI 185

Query: 363 AIEIILI-WMFIYLSLSIMIALFMNRLN 389
           A+ ++++ ++ + L +S++ +    RL 
Sbjct: 186 ALAMLVVAYLIMLLPISLVFSWIERRLR 213


>gi|224826829|ref|ZP_03699929.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224601049|gb|EEG07232.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 229

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R    AVPRGQ+EAA+A G+   +  R VL PQ MR  +P
Sbjct: 94  FLAGVVTLGFIYGAYFTETFRGAFQAVPRGQLEAAVAYGMKPWQVFRRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + + +  ++K ++L   +G +D+V         + Q     ++   IYL+++
Sbjct: 154 GIGNNWQVMIKATALVSIIGLSDIVKATQDAGKSSMQLFYFCVVGGLIYLAIT 206


>gi|59712192|ref|YP_204968.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio
           fischeri ES114]
 gi|59480293|gb|AAW86080.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio
           fischeri ES114]
          Length = 225

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 63/122 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S  T A+ AEIVR  +  +P+G++EAA A G+   +  + ++LP A+R  +P  +++
Sbjct: 96  VAFSLNTGAYTAEIVRGSINGLPQGEVEAAKAYGMNQFQTYKRIILPSALRRALPAYSNE 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  S++A  V   DL      + ++     E  +     Y+ L+ +I     +L  
Sbjct: 156 VIFMLHGSAIAGIVTLLDLTGAARLVNSRYYAPFESYIAAGMFYMCLTFIIIFIFKQLET 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|322831961|ref|YP_004211988.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167162|gb|ADW72861.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 237

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K    ++LP A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRAVPHGEIEAANAYGFSRFKLYTCIILPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      D++ +   I + T Q      I   IYL +S ++I LF
Sbjct: 167 VILMLHSTALAFTATVPDVLKIARDINSATYQPFYAFGIAAVIYLCVSFVLIGLF 221


>gi|117617583|ref|YP_855306.1| glutamine/glutamate ABC transporter, permease protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117558990|gb|ABK35938.1| glutamine/glutamate ABC transporter, permease protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 221

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 12/150 (8%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F  P LG  +  G       F +  IA++     ++ E +R+G+ AVP  Q+EA  A+
Sbjct: 74  LYFGLPALG-LSLSG-------FATAVIAMTFLGGGYLTEALRAGIQAVPPSQLEAGRAI 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V LPQA  + +P L + ++ LLK +++A AV   +L+      I    + 
Sbjct: 126 GLSRWQLLRHVQLPQAWLASLPALFANFIFLLKETTVASAVAVPELLYTTKNYIALYYKT 185

Query: 364 IEII----LIWMFIYLSLSIMIALFMNRLN 389
            E++    L+ + I+L LS+ + +   RL 
Sbjct: 186 YEMLAVLTLMCVLIFLPLSLALRVVERRLQ 215


>gi|307544138|ref|YP_003896617.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216162|emb|CBV41432.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 243

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 11/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           LS+    + T  ++   S ++G+VL+  L   R S+H   +    LP+ +   ++  G P
Sbjct: 23  LSYYGEGLVTTVQLVFLSLIIGLVLAVPLAIGRGSKHAWIR----LPIFFYC-YVFRGTP 77

Query: 234 TLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            LV L  + Y + F + +   + ++    +   F+   IA +  T A+  EI R  + + 
Sbjct: 78  LLVQLYLIYYGVVFVEGIQDTWLWV---ILEKPFVPALIAFTLNTGAYTTEIFRGAIKST 134

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G++EAA A G++     R ++LP A R  +P   ++ + +L  S++A  V   DL   
Sbjct: 135 PKGEIEAARAYGMSRALMLRRIVLPSAFRRALPAYGNEVIFMLHASAIASVVTIMDLTGA 194

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +  +     +  L    IYL L+  I  F   L  ++
Sbjct: 195 ARFVYARFYAPFDAFLFVAAIYLCLTFTIIYFFRHLEKRL 234


>gi|283786381|ref|YP_003366246.1| histidine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282949835|emb|CBG89458.1| histidine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 235

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLMISYVLISLF 221


>gi|213022525|ref|ZP_03336972.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 109

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 61/107 (57%)

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA  +   +L  
Sbjct: 1   IDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFR 60

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 61  QAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERE 107


>gi|119873304|ref|YP_931311.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum islandicum DSM 4184]
 gi|119674712|gb|ABL88968.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum islandicum DSM 4184]
          Length = 229

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 10/161 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + SFV+G+VL      L R F  K    L   Y+  F   G P LV I   + +
Sbjct: 19  TTLSLALLSFVIGLVLGSILL-LIRFFLPKPLPWLASAYVEAFR--GTPLLVQI---FII 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F    +G +    G  + P F +  IAL   +AA+ AEI RS + A+P  Q   A A  
Sbjct: 73  YFG---VGGYLKDYGINIDP-FTAGVIALGLNSAAYQAEIFRSAVQAIPLEQYLTAEAYA 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            T  +  R ++LPQA+R  IP L ++ + L+K+SSL   +G
Sbjct: 129 FTKTQTFRYIILPQALRIAIPALMNELVLLIKDSSLVAVIG 169


>gi|328555066|gb|AEB25558.1| L-cystine transport system permease protein TcyM [Bacillus
           amyloliquefaciens TA208]
 gi|328913423|gb|AEB65019.1| L-cystine transport system permease protein TcyM [Bacillus
           amyloliquefaciens LL3]
          Length = 235

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 11/154 (7%)

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           HF +    +F+    +   P  + + +ALS    A++ EI+RSG++AV  GQ EAA ++G
Sbjct: 84  HFSR----EFHLGWSANQIPVAVFVIMALSLTAGAYMTEILRSGIMAVDTGQAEAAYSIG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R V+LPQA    +P  T+  +  L  +S+A  V   ++        +     +
Sbjct: 140 LTRGQMIRRVILPQAFMISLPNFTNIGIGFLHTTSIAAIVAVPEITGTATIAASDNYAFL 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +    IY  L+++       L A  +L EK+
Sbjct: 200 EAFIGAAVIYWGLTLI-------LEAVNSLAEKR 226


>gi|300718308|ref|YP_003743111.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064144|emb|CAX61264.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 230

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 17/221 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+     IF+ S +LG +L+        H      + L ++Y  TF   G+P +V+I L
Sbjct: 20  VTLAMAVTIFIISTLLGGLLAFI-----EHKKIPVLRQLVVVYKITFK--GIPMVVVIFL 72

Query: 241 KY-----QLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            Y      L     +LG + N    +   P +  + IAL+   AAF AE+V+  L +   
Sbjct: 73  AYYGLPLALQSMSSLLGVEIN----AHAMPNWAIIIIALTACVAAFQAEVVKGALNSFDS 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ +AA +LG ++ +  R VL PQ + + IP L + ++ ++K  SLA A+   D+ +   
Sbjct: 129 GQSDAAHSLGYSNGQLFRRVLFPQIIVAAIPDLANSFMVIMKALSLAFAIEVVDIFAQAQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    +E  LI +  Y+ ++ ++    +++ A + ++
Sbjct: 189 LTAALNFYYLEAFLIAVVFYMVIAYVVTKVADKIEAALRVR 229


>gi|291460390|ref|ZP_06599780.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291416957|gb|EFE90676.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 246

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 53/92 (57%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  I    +  A + ++VR  L+++PR Q E+A ALGLT  +    +++PQ +R +IP 
Sbjct: 114 LSAVIVFVLWGTAELGDLVRGALVSIPRIQYESAAALGLTPLQTAFFIIIPQTVRRLIPL 173

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
             +    ++K SSL V +G  +++  G  II+
Sbjct: 174 AINLVTRMVKTSSLVVLIGVVEVLKTGQQIID 205


>gi|260460036|ref|ZP_05808289.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium opportunistum WSM2075]
 gi|259034247|gb|EEW35505.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 62/123 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AE+VR  + ++ R Q EA IAL L   +  R V+LPQA   ++P   + 
Sbjct: 89  LALGLNVGAYAAEVVRGAVQSIGREQHEACIALNLGRWQGLRHVILPQAFLVMLPTFGNN 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +S+   +   DL      +  QTG  +      + IY  L+++I+  +  L  
Sbjct: 149 AIELLKATSVVSLISLGDLTFQAQVVRAQTGNTMVPFTTILIIYFILALLISWGVRSLER 208

Query: 391 KIA 393
           ++A
Sbjct: 209 RMA 211


>gi|91225246|ref|ZP_01260414.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91189885|gb|EAS76157.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 225

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 58/105 (55%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++     R ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ MI
Sbjct: 162 GSAVAGIVTIMDLTGAARLVNSRYYAPFESFLTAGLFYMALTFMI 206


>gi|212218910|ref|YP_002305697.1| arginine transport system permease protein [Coxiella burnetii
           CbuK_Q154]
 gi|212013172|gb|ACJ20552.1| arginine transport system permease protein [Coxiella burnetii
           CbuK_Q154]
          Length = 173

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 91/173 (52%), Gaps = 10/173 (5%)

Query: 227 FLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+I G P LV I + Y    Q H+ +        I  S +   F    IAL+  T+A+  
Sbjct: 5   FIIRGTPLLVQIFIIYYGSGQFHWLRET------ILWSVLKRPFGCAVIALAINTSAYTT 58

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            ++R  + ++P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA 
Sbjct: 59  VLLRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAG 118

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+  +
Sbjct: 119 TITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQ 171


>gi|157144753|ref|YP_001452072.1| hypothetical protein CKO_00480 [Citrobacter koseri ATCC BAA-895]
 gi|157081958|gb|ABV11636.1| hypothetical protein CKO_00480 [Citrobacter koseri ATCC BAA-895]
          Length = 238

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|89072734|ref|ZP_01159299.1| putative ABC-type arginine transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89051554|gb|EAR57008.1| putative ABC-type arginine transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 246

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 22/160 (13%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPV--LGQF--NFIGGSTVSPEF 266
           +  +A+  LY  T +I G+P LVL+ L +   Q+  +  +  + ++  N+   S  + E+
Sbjct: 45  RWARAIATLY--TTVIRGIPDLVLMMLIFFGGQMLLNDSLYNINEWVNNYFTQSDPTHEW 102

Query: 267 MSL---YIALSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            S    YI +S + A          A++AE  R  ++AV +G++EA  A G++   + R 
Sbjct: 103 TSYLPDYIEISPFFAGILTIGFIFGAYMAETFRGAILAVDKGELEAGKAYGMSAFLSFRR 162

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +LLPQ +R  +P   + +L LLK ++L   +G  D+V  G
Sbjct: 163 ILLPQMVRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKG 202


>gi|262278400|ref|ZP_06056185.1| amino acid ABC transporter permease [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258751|gb|EEY77484.1| amino acid ABC transporter permease [Acinetobacter calcoaceticus
           RUH2202]
          Length = 229

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VP GQ+EAA+A G+T  +  R VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPTGQIEAAMAYGMTPWQVFRRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  L+K ++L   +G  D+V +       T Q     ++   IYL+++ +  L +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKITQDAGRSTMQLFFFSIVAAAIYLAITTVSNLIL 213

Query: 386 NRLNAKIALKEKK 398
             L  + +   +K
Sbjct: 214 MWLERRYSAGVRK 226


>gi|197264568|ref|ZP_03164642.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197242823|gb|EDY25443.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
          Length = 235

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S I+I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYILISLF 221


>gi|85704452|ref|ZP_01035554.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670860|gb|EAQ25719.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 248

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 64/124 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+  +  ++  EI RSG+ AVP    EAA +LG +  K    V  P A+R  +P LT+ 
Sbjct: 120 IAIGIFGGSYNVEIFRSGIEAVPASTKEAAESLGFSGFKIFVYVTFPLALRICLPALTNN 179

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L K SSLA  +   ++      I + +    E++L+    Y+ L  +IA  M  +  
Sbjct: 180 IVSLAKTSSLAYVIAVPEITYSLSGIWSDSVNVPEMMLLLFGYYIVLIAIIARIMTMIER 239

Query: 391 KIAL 394
           KIAL
Sbjct: 240 KIAL 243



 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 30/52 (57%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
           +IG +    + S  +++ W+   Y+E+FRN PP+V + F Y  + ++ P  D
Sbjct: 52  VIGVIGAGAQTSRLRIIRWMVSAYIEIFRNTPPIVQLLFFYFGLGAITPQVD 103


>gi|322831659|ref|YP_004211686.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321166860|gb|ADW72559.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 221

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+   P+GQ EA   LGLT  +    ++LP +++ I P L SQ + ++  
Sbjct: 102 GAYSTEIIRAGIQVTPKGQWEAGRVLGLTRSQTFLRIVLPPSLKRIYPSLVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           SS+   V + +L      I ++T  + E+ L+    YL LS+
Sbjct: 162 SSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLFYLLLSV 203


>gi|218670451|ref|ZP_03520122.1| ABC transporter, membrane spanning protein [Rhizobium etli GR56]
          Length = 198

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 63/114 (55%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+R+G+ A PRGQ EA  +L +T  +  R V++  A++ I P L+SQ + ++  S
Sbjct: 78  AYSCEIIRAGIQATPRGQFEAGASLAMTPFQTFRHVVVVPALQRIWPALSSQVVIVMLGS 137

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++   V   DL      I ++T ++ E       +YL L+I++   + R+ A I
Sbjct: 138 AVVSQVAAQDLSFATNFIQSRTFRSFEAYFFSTLVYLVLAILLRWMLARIGAMI 191


>gi|327393301|dbj|BAK10723.1| arginine transport system permease protein ArtQ [Pantoea ananatis
           AJ13355]
          Length = 143

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 64/123 (52%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           C+  A+ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+L L
Sbjct: 18  CFMLAYASQTLRGALKAVPIGQWESGQALGMKKSAIFFRLIMPQMWRHALPGLGNQWLVL 77

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK+++L   +   DL+    +I  +T +     L+   IYL++++     + R+  +   
Sbjct: 78  LKDTALVSLISVNDLMLQTKSIATRTQEPFTWFLVAAAIYLAITLFSQAVLRRIELRTTR 137

Query: 395 KEK 397
            E+
Sbjct: 138 FER 140


>gi|293552748|ref|ZP_06673409.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1039]
 gi|291603057|gb|EFF33248.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1039]
          Length = 179

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 34/171 (19%)

Query: 219 LPL-LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LPL ++I  +L F  G+P LVL+ L   L+F  P               +  +L  ++ C
Sbjct: 12  LPLNVFIRFYLSFFRGIPALVLLFL---LYFGLPY--------------QLSALTASVIC 54

Query: 276 YT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +T   +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  +
Sbjct: 55  FTITSSAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAM 114

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L+K +SLA  +   ++      I  +T           F Y SL I++AL
Sbjct: 115 DLVKGTSLAATITVPEIFQKAKIIGGRT-----------FDYFSLYILVAL 154


>gi|260221298|emb|CBA29723.1| Histidine transport system permease protein hisQ [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 228

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 6/124 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E  R  ++++P+GQMEAA A G+   +A   +  PQ +R  +P  T+ +L L+K+
Sbjct: 105 GAYMTETFRGAILSIPKGQMEAAWAFGMGRIRAFMRITAPQMVRYALPGFTNNWLVLIKS 164

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRLNAKIAL 394
           ++L   +G  ++  +       T    E  L       IY S+S+ +   + ++NA+ +L
Sbjct: 165 TALVSLIGLKEMTYLSKQASAATRSPFEFFLFSAALFLIYTSVSLFV---LRKVNARYSL 221

Query: 395 KEKK 398
             K+
Sbjct: 222 GTKR 225


>gi|289676730|ref|ZP_06497620.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 94

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 48/81 (59%)

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++        +    E   +   I
Sbjct: 5   VLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQTAEFSANLFEAFTLATLI 64

Query: 374 YLSLSIMIALFMNRLNAKIAL 394
           Y +L++ + L M  +  K+A+
Sbjct: 65  YFTLNMSLMLLMRAIEKKVAV 85


>gi|169832815|ref|YP_001694169.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168995317|gb|ACA35929.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 206

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 8/136 (5%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 24  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 82

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA   ++P  ++  + L+K +S+  
Sbjct: 83  ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVVLPSFSANVIFLIKKTSVFS 142

Query: 343 AVGFADLVSVGGTIIN 358
           AV  ADL+ V   +I 
Sbjct: 143 AVALADLMYVAKDLIG 158


>gi|149201683|ref|ZP_01878657.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035]
 gi|149144731|gb|EDM32760.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035]
          Length = 216

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 52/80 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  + AA++AE +R+ +I+V R Q EA  ++G+T  +  + ++LPQA R   P L + 
Sbjct: 89  LGLMLHFAAYMAESIRAAIISVDRSQWEAGQSIGMTQWQLMQRIILPQAARVAAPTLVNY 148

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++++LK +SLA  +G  +++
Sbjct: 149 FIDMLKATSLAFTLGVTEMM 168


>gi|224368516|ref|YP_002602679.1| GlnP3 [Desulfobacterium autotrophicum HRM2]
 gi|223691232|gb|ACN14515.1| GlnP3 [Desulfobacterium autotrophicum HRM2]
          Length = 219

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   ++AF ++I R  ++++  GQ+EAA A+GL+       V++PQ +R  I P T++
Sbjct: 88  LALGLCSSAFQSQIFRGAILSIQSGQLEAAKAMGLSLPGTIFHVVIPQMIRLSIGPWTNE 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + + LK++SLA  VG  +++     +I  T G    + L    +Y +L+ +   F  +L 
Sbjct: 148 FSSELKDTSLAYVVGVVEIMRNAKYVIAYTYGNTAAVYLFVGILYFTLTRIGTYFFYKLE 207

Query: 390 AKI 392
            K+
Sbjct: 208 EKL 210


>gi|152979604|ref|YP_001345233.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
 gi|150841327|gb|ABR75298.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 222

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 52/85 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+EA+ ALGLT  +    +LLPQ+++ + P   + +  ++
Sbjct: 99  WGTAEMGDLVRGALTSIEKHQIEASYALGLTKMQTFIYILLPQSLKRVTPGAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA+ +G  +++ VG  II  +
Sbjct: 159 KTSSLAMLIGVLEVIKVGQQIIETS 183


>gi|126642342|ref|YP_001085326.1| amino acid ABC transporter permease [Acinetobacter baumannii ATCC
           17978]
          Length = 164

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 59/113 (52%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 29  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALP 88

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + + +  L+K ++L   +G  D+V +       T Q     ++   IYL+++
Sbjct: 89  GIGNNWQVLIKATALVSIIGLTDIVKITQDAGRSTMQLFFFSIVAAAIYLAIT 141


>gi|307706282|ref|ZP_07643095.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus mitis SK321]
 gi|307618315|gb|EFN97469.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus mitis SK321]
          Length = 226

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 44/212 (20%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 31  SFLLGLIVSII-----RHYRITILAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV--- 82

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L  +        F+GGS                   ++AE  RSGL AV + Q E  +
Sbjct: 83  --LSSEVCATLGLVFLGGS-------------------YMAESFRSGLEAVSQTQQEIGL 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--- 358
           A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    
Sbjct: 122 AIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYY 181

Query: 359 QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 182 ETDIALAMLVVAYLIMLLPVSLVFSWIERRLR 213


>gi|254489588|ref|ZP_05102790.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           GAI101]
 gi|214041758|gb|EEB82399.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           GAI101]
          Length = 231

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 63/112 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+   + A+ AE++R GL  +P GQ+EAA  LG++   A   + LPQ  R+++P   ++
Sbjct: 100 LAVGLNSGAYSAELLRGGLRQIPVGQLEAARVLGMSGFHALTRITLPQVYRNVLPVTGNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            + ++K S+LA AV   ++       +++T    E+  +   IYL + + ++
Sbjct: 160 IILVMKGSALASAVTVMEMTGAARAFVSKTYAPFEVFTVAGIIYLVIGLALS 211


>gi|310659739|ref|YP_003937460.1| ABC transporter permease [Clostridium sticklandii DSM 519]
 gi|308826517|emb|CBH22555.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Clostridium sticklandii]
          Length = 223

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 63/110 (57%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  +AA+IAE  R+ +++V + Q +A +++GLT  +    V LPQA+R  IP   + ++
Sbjct: 98  MSMNSAAYIAETTRAAILSVDKLQQDAGLSVGLTLWQTMLYVQLPQALRVAIPSFGNTFI 157

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +++ ++L   +G  DL+ +G        +  EI L    IY +++++I 
Sbjct: 158 GIIQGTALTFMLGLNDLMGLGKMKAAVNYKFFEIYLAVGLIYWAITLIIG 207


>gi|256828612|ref|YP_003157340.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256577788|gb|ACU88924.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 222

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 56/81 (69%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L   + A+ ++I R  ++++ +GQ++AA ALG++   A R ++LPQA+R  IP  +++
Sbjct: 94  IVLGMTSGAYQSQIFRGSILSLSKGQLKAARALGMSDGLAIRSIILPQALRLSIPGWSNE 153

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           Y  +LK+S+LA  +G +++++
Sbjct: 154 YSIILKDSALAFVLGASEIMA 174


>gi|297199926|ref|ZP_06917323.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|197710394|gb|EDY54428.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 216

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 28/171 (16%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SFVLG+V +L     SR      G       + T  +   P LV      QL F   VL 
Sbjct: 33  SFVLGLVWALLMRAPSRFVRWPVG-------VVTEFVRNTPLLV------QLFFLFYVLP 79

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           ++    G T+S    +  I +  + + +  ++ R+G+ AVP GQ EAA AL L   +  +
Sbjct: 80  EW----GVTLS-ALATGVIGIGLHYSTYTMQVYRAGIEAVPAGQWEAATALNLPRVRTWQ 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           +V+LPQA+R ++P L +  +++LK+  + + +          T++   GQA
Sbjct: 135 VVILPQAIRRVVPALGNYVISMLKDIPMLMVI----------TVLEMLGQA 175


>gi|15611941|ref|NP_223592.1| amino acid ABC transporter permease [Helicobacter pylori J99]
 gi|4155450|gb|AAD06454.1| putative AMINO ACID ABC TRANSPORTER, PERMEASE PROTEIN [Helicobacter
           pylori J99]
          Length = 237

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 13/200 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   ++ IV++L      +HF  K   A    Y+S  +I G P LV I + +   +  P
Sbjct: 47  FILGLLIAIVVALIKIAPPKHFMHKALLAGVNFYVS--IIRGTPLLVQIVVVF---YGLP 101

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL + +
Sbjct: 102 ALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLNYLQ 153

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I L 
Sbjct: 154 TFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPIYLE 213

Query: 370 WMFIYLSLSIMIALFMNRLN 389
              IY    +++ +   R+ 
Sbjct: 214 AALIYWLFCLVLEVIQKRVE 233


>gi|323525228|ref|YP_004227381.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382230|gb|ADX54321.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 224 ISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAA 279
           + T L+ G+P LVL+ L +   Q+  +       + +G   +  + F++    L     A
Sbjct: 52  VYTTLVRGVPDLVLMLLLFYSIQIWLNNLT----DMLGWDQIDIDPFVAGVAVLGFIYGA 107

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R   +AVPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  ++K ++
Sbjct: 108 YFTETFRGAFLAVPRGQLEAGAAYGMTSWQVFSRIMFPQMMRFALPGIGNNWQVMVKATA 167

Query: 340 LAVAVGFADLVS 351
           L   +G AD+V 
Sbjct: 168 LVSIIGLADVVK 179


>gi|190895057|ref|YP_001985350.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700718|gb|ACE94800.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|327194398|gb|EGE61258.1| putative amino acid ABC transporter permease [Rhizobium etli
           CNPAF512]
          Length = 222

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S Y AA+ +EI RSG  AVP+G +EA   +GLT R+    +LLP+    ++PP  + 
Sbjct: 93  IGISIYGAAYFSEIFRSGFQAVPKGHIEAGECVGLTRRQIVWRILLPEMTMLVLPPSVNM 152

Query: 331 YLNLLKNSSL 340
            + L+K +++
Sbjct: 153 VVILMKETAV 162


>gi|171741001|ref|ZP_02916808.1| hypothetical protein BIFDEN_00063 [Bifidobacterium dentium ATCC
           27678]
 gi|283455610|ref|YP_003360174.1| glutamine transport system permease glnP [Bifidobacterium dentium
           Bd1]
 gi|306823352|ref|ZP_07456727.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309802737|ref|ZP_07696841.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171276615|gb|EDT44276.1| hypothetical protein BIFDEN_00063 [Bifidobacterium dentium ATCC
           27678]
 gi|283102244|gb|ADB09350.1| glnP2 Glutamine transport system permease protein glnP
           [Bifidobacterium dentium Bd1]
 gi|304553059|gb|EFM40971.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308220801|gb|EFO77109.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 218

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 24/178 (13%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP L ++    Q      ++G   F+GGS                   
Sbjct: 65  PLLVQLYFLYFGLPKLGVVWSAEQC----AIVG-LGFLGGS------------------- 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R GL  +P  Q E+A  LG    +    V++PQA+ + IP + +  + L+K SS
Sbjct: 101 YMAEAMRGGLETIPNVQRESAYVLGFNTWQTLSRVVIPQAVSTSIPGVVANVIFLIKESS 160

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  A+  AD++ +   +I       E + + +  YL + + I+LF   L  +   + +
Sbjct: 161 VVSAIALADVMYMAKDLIGMYYSTYESLFMLVVAYLIILLPISLFGTWLERRFDYERR 218


>gi|159185709|ref|NP_357247.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140843|gb|AAK90032.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 210

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 73/130 (56%), Gaps = 2/130 (1%)

Query: 255 NFIGGSTVSPEFMSLYI-ALSC-YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           N +GG+  +P     ++ A++C + AAF AE +R G+ AVP   +EAA A+G +  +  R
Sbjct: 64  NALGGAQNNPLTPFFWVVAITCLHVAAFHAEALRGGIEAVPTTTIEAARAIGFSSLEILR 123

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V  P A+R+ +P + +  +NL+K +++  A+   ++      I  Q    +E++L+ + 
Sbjct: 124 YVEFPLAIRTALPSIINNLVNLVKLTTVGSAIAVGEITYASILIWTQRDNVVELMLVILI 183

Query: 373 IYLSLSIMIA 382
            +  ++ ++A
Sbjct: 184 FFSVINFIVA 193


>gi|307352564|ref|YP_003893615.1| polar amino acid ABC transporter inner membrane subunit
           [Methanoplanus petrolearius DSM 11571]
 gi|307155797|gb|ADN35177.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanoplanus petrolearius DSM 11571]
          Length = 222

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R  + +V  GQ+ AA +LG+T  ++   ++LPQA+R  IP L+++++ L+K 
Sbjct: 100 AAYNSEYIRGAIKSVKEGQIIAARSLGMTKYQSIFYIVLPQALRRAIPGLSNEFIYLIKY 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           SSLA  +   +L   G  I  +     E  +    IYL L  +  +    L  K A+
Sbjct: 160 SSLAFMLTLVELTGAGKLIATKYFTYTETFIFVGAIYLILVTITTVGAGMLEKKFAV 216


>gi|295100981|emb|CBK98526.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Faecalibacterium
           prausnitzii L2-6]
          Length = 257

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 48/81 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL  + ++ IAEIVR GL  V +GQ EA  A G    +    ++LPQA R+I+P L SQ
Sbjct: 113 LALILFNSSVIAEIVRGGLNGVSKGQFEAGYAQGFNTAEVLLYIVLPQAYRNIVPTLLSQ 172

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            +  +K+SS    V   +L++
Sbjct: 173 VITTIKDSSYLANVATIELMA 193


>gi|225350815|ref|ZP_03741838.1| hypothetical protein BIFPSEUDO_02385 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158271|gb|EEG71513.1| hypothetical protein BIFPSEUDO_02385 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 224

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 51/83 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P+ Q E+A  LGL+  +    V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALESIPKAQYESAYVLGLSGWQTFVTVILPQALRRLLPASVNLATRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|218511054|ref|ZP_03508932.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli Brasil 5]
          Length = 231

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 43/63 (68%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P +++  +AL  +TAAF+AEI R  + +V RGQ EA+ +LG+   +  R V+LPQA+R  
Sbjct: 84  PAWLAAGMALILWTAAFLAEIWRGCVESVARGQWEASASLGMGRLQQMRYVILPQALRVA 143

Query: 324 IPP 326
           IPP
Sbjct: 144 IPP 146


>gi|209546709|ref|YP_002278627.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537953|gb|ACI57887.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S Y AA+ +EI RSG  AVP+G +EA   +GLT  +  R +LLP+    ++PP  + 
Sbjct: 93  IGISVYGAAYFSEIFRSGFQAVPKGHIEAGECVGLTKGQIVRRILLPEMTMLVLPPSVNM 152

Query: 331 YLNLLKNSSL 340
            + L+K +++
Sbjct: 153 VVILMKETAV 162


>gi|28872470|ref|NP_795089.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855725|gb|AAO58784.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 231

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 63/115 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGLCFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            L + ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVL 210


>gi|312865985|ref|ZP_07726206.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098389|gb|EFQ56612.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 224

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 53/84 (63%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +I  S  T   ++EI+R+ ++ V +GQ+EAA ++GLT  ++   V+ PQA+R+ +P L +
Sbjct: 101 FIIFSLMTTGTLSEILRAAILTVDKGQLEAAQSIGLTTTQSYFRVVFPQALRNALPNLCN 160

Query: 330 QYLNLLKNSSLAVAVGFADLVSVG 353
             +N++K +SL   +   D+ ++ 
Sbjct: 161 LVINIVKGTSLVFVMTVKDITAIA 184


>gi|301793878|emb|CBW36273.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae INV104]
          Length = 225

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 57/105 (54%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  + + AA + ++VR  + ++P+ Q E+  ALGLT+ +    +++PQ +R ++P  
Sbjct: 94  SAIIVFTLWGAAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQA 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 154 INLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|148997217|ref|ZP_01824871.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|168486795|ref|ZP_02711303.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|168575369|ref|ZP_02721305.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|307067317|ref|YP_003876283.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|147756917|gb|EDK63957.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|183570244|gb|EDT90772.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|183578523|gb|EDT99051.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|306408854|gb|ADM84281.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
          Length = 226

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV  ADL+ V   +I    +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 163 AVALADLMYVAKDLIGLYYETDIALAMLVVAYLIMLLPISLVFSWIERRLR 213


>gi|33151970|ref|NP_873323.1| arginine transporter permease subunit ArtQ [Haemophilus ducreyi
           35000HP]
 gi|33148192|gb|AAP95712.1| arginine transport system permease protein [Haemophilus ducreyi
           35000HP]
          Length = 221

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 66/127 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   AA+ ++ +R  + AVP GQ ++  ALGL+       +++PQ  R  +P L++Q
Sbjct: 94  LALSLIFAAYASQSLRGAIQAVPNGQWQSGAALGLSRSYTFWHIVMPQVWRHALPGLSNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +G  DL+     I     Q          IYL+++++  + + +L  
Sbjct: 154 WLVLLKDTALISLIGVNDLMRQTDLINTNEHQPFTWYGFSALIYLAITLISQVIIAKLAQ 213

Query: 391 KIALKEK 397
                E+
Sbjct: 214 HFTRFER 220


>gi|111021336|ref|YP_704308.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110820866|gb|ABG96150.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 214

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 51/81 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  + + ++AE+ R+G+ AVP GQ EAA AL +   +  R ++LPQA+R ++P L + 
Sbjct: 91  VVLGIHYSTYMAEVYRAGIEAVPVGQWEAARALSIAPTRTWRAIILPQAIRRVVPALGNY 150

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            +++ K++    A+   ++V+
Sbjct: 151 AVSMFKDTPFLFAITVVEMVT 171


>gi|271500709|ref|YP_003333734.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344264|gb|ACZ77029.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 246

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 58/108 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+++E  R+G+ +VP+GQ+EAA  LG+        V+LPQA R++ P + + 
Sbjct: 93  LALGINVGAYLSETFRAGIQSVPKGQLEAAWILGIPRWHIFLSVVLPQATRAVWPAIINN 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + LL  +SL  A+   +L      I  +T   I+   I   IYL LS
Sbjct: 153 LIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSIVTVIYLLLS 200


>gi|225860689|ref|YP_002742198.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229177|ref|ZP_06962858.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255599|ref|ZP_06979185.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502497|ref|YP_003724437.1| amino acid ABC superfamily transporter permease [Streptococcus
           pneumoniae TCH8431/19A]
 gi|225726493|gb|ACO22344.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238092|gb|ADI69223.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Streptococcus pneumoniae TCH8431/19A]
 gi|327390246|gb|EGE88588.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 226

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANIIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV  ADL+ V   +I    +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 163 AVALADLMYVAKDLIGLYYETDIALAMLVVAYLIMLLPISLVFSWIERRLR 213


>gi|310644454|ref|YP_003949213.1| amino acid abc transporter, permease protein [Paenibacillus
           polymyxa SC2]
 gi|309249405|gb|ADO58972.1| Amino acid ABC transporter, permease protein [Paenibacillus
           polymyxa SC2]
          Length = 225

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 13/171 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I + S ++G +L +    L R    K  + +   Y+ TF I  +P LV +   Y ++F 
Sbjct: 27  EIALLSIIIGTLLGILMG-LLRTLQSKPIRFVLRFYLETFRI--IPILVWL---YVVYFG 80

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 F  +    +S E  ++ I  S + AA I +IVR  L ++P+ Q+E+  ALGLT+
Sbjct: 81  ------FTPLLNVDISGELTAV-IVFSLWGAAEIGDIVRGALESLPKHQVESGQALGLTY 133

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +  R VL+PQA+R ++P   +    ++K +SL V +G  ++V VG  II 
Sbjct: 134 WQLYRHVLIPQAVRRMLPGSINLATRMIKTTSLVVLIGVVEVVKVGQQIIE 184


>gi|237802192|ref|ZP_04590653.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331025049|gb|EGI05105.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 231

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 67/126 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P
Sbjct: 96  FAAGVIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++  + M
Sbjct: 156 GLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTREAFTFYMVAAVMYLCLTVLAMIGM 215

Query: 386 NRLNAK 391
             L  +
Sbjct: 216 YFLEKR 221


>gi|291286086|ref|YP_003502902.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290883246|gb|ADD66946.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 225

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 73/129 (56%), Gaps = 4/129 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+  +  A+++E+ R+G+ +VP+GQ EAA++L L+  +    V+LPQA+      + + 
Sbjct: 95  IAIGLHYGAYLSEVYRAGIESVPKGQWEAAVSLSLSRVRTYTRVILPQAVPPAFAGMGNY 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMN 386
            + + K++ +   +G A+L+    +I ++  + +E    + +I++ I L  + M+ +   
Sbjct: 155 LVGIFKDTPMLSVIGVAELMHTANSIGSENYRYLEPYTLVGVIFLLISLPTAWMLRILER 214

Query: 387 RLNAKIALK 395
            +  K+ L+
Sbjct: 215 VIRKKMGLR 223


>gi|167034985|ref|YP_001670216.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166861473|gb|ABY99880.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    ++P    +   L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDIINRVAPLLGYEDYI---DLNPLIAGIG-TLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   + +P+GQ EA +A G+++R+    + +PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFLGIPKGQAEAGVAYGMSNRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|125973969|ref|YP_001037879.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum ATCC 27405]
 gi|256005805|ref|ZP_05430757.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 2360]
 gi|281418129|ref|ZP_06249149.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum JW20]
 gi|125714194|gb|ABN52686.1| amino acid ABC transporter membrane protein, PAAT family
           [Clostridium thermocellum ATCC 27405]
 gi|255990251|gb|EEU00381.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 2360]
 gi|281409531|gb|EFB39789.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum JW20]
 gi|316939833|gb|ADU73867.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 1313]
          Length = 220

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 21/181 (11%)

Query: 186 NAKIFV----FSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFL--IFGLPTLVLI 238
           N K+F+    F+  LG++++     +SR +        PL + + TF+  I G P +   
Sbjct: 18  NCKLFILTLLFALPLGMIIAF--GSMSRFY--------PLRWLVRTFVWVIRGTPLM--- 64

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L+  + F  P L    F   S  S  F++  +A     A + +EI R G+ ++P GQ E
Sbjct: 65  -LQLIIIFFGPGLLNMPFSWPSGESGRFVAATVAFVINYACYFSEIYRGGIESIPVGQYE 123

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A   LG+T  +    V L Q ++ I+PP+ ++ + L+K++SLA  +   +++ + G   N
Sbjct: 124 AGQVLGMTKTQIFFHVTLLQVIKRIVPPIGNEVITLVKDTSLARIIANKEIIMMAGEYSN 183

Query: 359 Q 359
           +
Sbjct: 184 K 184


>gi|227820777|ref|YP_002824747.1| putative amino acid ABC transporter, inner membrane component
           [Sinorhizobium fredii NGR234]
 gi|227339776|gb|ACP23994.1| putative amino acid ABC transporter, inner membrane component
           [Sinorhizobium fredii NGR234]
          Length = 241

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVS-PEFMSLYIALSCYTA 278
           LL   T ++  +P LVLI L Y    D  +L QF   +G  TV     M+    +     
Sbjct: 62  LLECYTTIVRAVPELVLILLLYYAGTD--LLNQFLGAMGIGTVDISGLMAGIFVIGVVQG 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  + AVP GQ+EAA A G++  K  R + LP  +   IP L + +L   K++
Sbjct: 120 AYSTEVLRGAIKAVPAGQIEAARAYGMSPTKVLRRITLPAMLPYAIPGLANLWLIATKDT 179

Query: 339 SLAVAVGFADLVSV 352
           +L   VGF++L  V
Sbjct: 180 ALLAVVGFSELTLV 193


>gi|241666825|ref|YP_002984909.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862282|gb|ACS59947.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 241

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 22/178 (12%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+   A       VLG +++  A +LS +    T   L  +Y + F   G+P L++I  
Sbjct: 24  MTLAVTATALAIGAVLGAIVA--AAKLSGNLVLVT---LGNVYTTVFR--GVPELLII-- 74

Query: 241 KYQLHFDKP--------VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            Y ++F            +G   F+G     P F++  +A+   + A+ AE+ RS  +A+
Sbjct: 75  -YLIYFGGSSAVTSIGQAMGYEGFLG----LPSFIAGALAVGIISGAYQAEVFRSAFLAI 129

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +G++EAA A+G+      R +++PQ  R  IP L + +   LK+S+L    G A+L+
Sbjct: 130 SKGELEAASAIGMHRGMRLRRIIMPQVFRLAIPGLGNVWQLSLKDSALISVTGLAELM 187



 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 13/73 (17%)

Query: 90  LVGFVNTFWLAF-------------SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           L+GF +T W A              + +    ++G +V A +LS N ++  +  VY  VF
Sbjct: 6   LLGFGSTGWGALLIAAALMTLAVTATALAIGAVLGAIVAAAKLSGNLVLVTLGNVYTTVF 65

Query: 137 RNIPPLVVIFFLY 149
           R +P L++I+ +Y
Sbjct: 66  RGVPELLIIYLIY 78


>gi|54309894|ref|YP_130914.1| putative ABC-type arginine transport system, permease component
           [Photobacterium profundum SS9]
 gi|46914333|emb|CAG21112.1| putative ABC-type arginine transport system, permease component
           [Photobacterium profundum SS9]
          Length = 246

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 69/137 (50%), Gaps = 8/137 (5%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  + +     A++AE  R  +++V +G++EA  A G++  K+   +LLPQ +R
Sbjct: 112 ISP-FVAGVVTIGFIFGAYMAETFRGAILSVDKGELEAGKAYGMSGFKSFHRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   + +L LLK ++L   +G  D+V  G      T             Y++++++ 
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLDDMVRKGSLAAGATQMPFT-------FYMTIAVVF 223

Query: 382 ALFMNRLNAKIALKEKK 398
            LF     + +   E++
Sbjct: 224 LLFTTLSTSALKWAERR 240


>gi|237797982|ref|ZP_04586443.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020833|gb|EGI00890.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 215

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 51/85 (60%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +T+A++AEI R  + ++ +GQ EA+ +L ++  +  R V+LPQA+R  + P     + ++
Sbjct: 95  FTSAYLAEIWRGCVESISKGQWEASASLAMSPLEQMRYVILPQALRIAVAPTVGFSVQVV 154

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K +++   +GF +L   G  + N T
Sbjct: 155 KGTAVTSIIGFTELTKTGSMLANAT 179


>gi|237668178|ref|ZP_04528162.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237656526|gb|EEP54082.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 210

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 57/100 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++ + +T A IAEIVR G+ +V  GQ EA+ + G +  +  R ++L Q+ ++ IP + SQ
Sbjct: 86  LSFTLFTTAAIAEIVRGGMNSVNAGQYEASYSQGFSKIQTLRYIILTQSFKNCIPTILSQ 145

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++K++S   AVG  +    G  ++     + ++ L++
Sbjct: 146 SSTVIKDTSYLWAVGIEEFTGKGMILMGSFATSTQVFLLF 185


>gi|209518289|ref|ZP_03267115.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501309|gb|EEA01339.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 277

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 3/142 (2%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F+  G +   P+++ + +AL+   +A IAE+ R  + ++P  Q EAA +L  +  +   
Sbjct: 132 EFSVFGTTLPFPDWLKVTLALALPASANIAEVFRGAVASIPTTQWEAAGSLAFSRGQILL 191

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTGQAIEIILI 369
            ++LPQ +R ++PP  + Y  +   ++LA  VG  DL+    +  + + ++   +   L 
Sbjct: 192 HIVLPQCVRRMLPPWMNVYAIITMGTALASLVGVHDLIDTAQIASSTVARSSFTVLTYLA 251

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
            M I+ +    I+LF   L  +
Sbjct: 252 TMVIFFAYCYPISLFTRWLERR 273


>gi|126733841|ref|ZP_01749588.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           sp. CCS2]
 gi|126716707|gb|EBA13571.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           sp. CCS2]
          Length = 277

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 53/84 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A++AEI RSG+ +V + Q  AA++LGL+ R+  R V+LPQA+R+++P   + 
Sbjct: 152 LALILTYSAYVAEIFRSGIDSVHQSQRSAALSLGLSERQVMRDVVLPQAIRNVVPSQMNM 211

Query: 331 YLNLLKNSSLAVAVGFADLVSVGG 354
            + L K+ SL   +G  ++    G
Sbjct: 212 LIALQKDVSLLSFIGPVEIFRQAG 235


>gi|306841171|ref|ZP_07473887.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306845329|ref|ZP_07477904.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306274245|gb|EFM56057.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306288797|gb|EFM60115.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 220

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 65/122 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ Y + + AEI RSG +AVPRGQ+EAA A+G++       +LLP ++ S +P L + 
Sbjct: 91  LGLTIYGSPYFAEIFRSGFLAVPRGQLEAARAIGMSEPTIVWRILLPLSLVSALPALVNF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K + +   +   +L+     +  +T + +E  L+    +  L   I+ F  RL  
Sbjct: 151 SIILTKETVILSIITVPELMYQVQRMSTETFRYLEANLVLALFFWGLVETISRFGRRLET 210

Query: 391 KI 392
           +I
Sbjct: 211 RI 212


>gi|260550886|ref|ZP_05825092.1| amino acid ABC transporter permease [Acinetobacter sp. RUH2624]
 gi|260406013|gb|EEW99499.1| amino acid ABC transporter permease [Acinetobacter sp. RUH2624]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKI 180


>gi|238920410|ref|YP_002933925.1| arginine transporter permease subunit ArtQ [Edwardsiella ictaluri
           93-146]
 gi|238869979|gb|ACR69690.1| polar amino acid ABC transporter, inner membrane subunit
           [Edwardsiella ictaluri 93-146]
          Length = 238

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 4/117 (3%)

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP+GQ EA +ALGL++ +    +++PQ  R  +P L +Q+L LLK+++L 
Sbjct: 120 SQTLRGALKAVPQGQREAGMALGLSNSQIFFRLVMPQMWRHALPGLGNQWLVLLKDTALV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   DL+    +I  +T +       W  I  ++ ++I LF   +  +I L+  +
Sbjct: 180 SLISVNDLMLQTKSIATRTQEP----FTWYCIAAAIYLVITLFSQYVLKRIELRTTR 232


>gi|269120155|ref|YP_003308332.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614033|gb|ACZ08401.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 217

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 24/166 (14%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + +  +  PLL    FL FGLP     AL  +L      L    F+GGS           
Sbjct: 58  YVEVSRNTPLLIQIFFLYFGLP-----ALGIKLSNYTCALTGIIFLGGS----------- 101

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
                   ++ E  R+GL ++ + Q+E+ +++GL+ R+  R V+ PQA R  +P   + +
Sbjct: 102 --------YMTEAFRAGLESIEKVQIESGLSIGLSRRQLMRYVIFPQAFRIALPATGANF 153

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           + LLK +S+  A+  A+L+    ++I    +  E++ + +  Y  L
Sbjct: 154 IFLLKETSVVSAISVAELLYTTNSLIAIYYKTYEMLFLLVISYFIL 199


>gi|190891146|ref|YP_001977688.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696425|gb|ACE90510.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 248

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSG 288
           PTLV      QL F   VL  F  N +GG+  +P   F  +   +  + AA  AE +R+G
Sbjct: 84  PTLV------QLMFSFLVLNTFVSNLVGGAQNNPLTPFFWVVAVVGLHIAALHAEAIRAG 137

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP   +EAA  +G +  +  R V +P A R+ +P + +  +NL+K +++  A+  ++
Sbjct: 138 IEAVPASTVEAARGIGFSKLQILRYVEIPLAFRASLPAIVNNLINLVKLTTVGNAIAVSE 197

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +      +  Q    + ++++ +  +  +++++A
Sbjct: 198 ITYASIMVWTQRDNVVSLMIVILLFFSLINLVVA 231


>gi|254237453|ref|ZP_04930776.1| hypothetical protein PACG_03528 [Pseudomonas aeruginosa C3719]
 gi|126169384|gb|EAZ54895.1| hypothetical protein PACG_03528 [Pseudomonas aeruginosa C3719]
          Length = 230

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 26/208 (12%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S VLG++L  F+  + R         +  +Y+S F   G P LV I   + L++  P +G
Sbjct: 39  SMVLGLILG-FSVAVVRVTKVPVVSQIAAVYVSAF--RGTPLLVQI---FVLYYGLPSVG 92

Query: 253 -QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +F  +             +AL+   AA ++E +R  ++ + +GQ EA +++GLT  +  
Sbjct: 93  IEFTPVTAGI---------LALTLNVAASLSESMRGAILGIDKGQWEAGLSVGLTWGQTL 143

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++ PQA+R  +P L++  ++L+K++SL   +   +L+     +I +T Q + + L   
Sbjct: 144 WNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAA 203

Query: 372 FIYLSLSIMIALF-------MNRLNAKI 392
            IY  LS   ALF        NRL A +
Sbjct: 204 GIYWLLS---ALFERVQKALENRLTAPL 228


>gi|319943775|ref|ZP_08018056.1| glutamine/glutamate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
 gi|319743008|gb|EFV95414.1| glutamine/glutamate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
          Length = 226

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 30/165 (18%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A R     + +T + +P+L     L FGLPT          H D                
Sbjct: 51  AVRAGCRLYLETIRIVPILVWLFVLYFGLPTWT------GWHVD---------------- 88

Query: 264 PEFMSLYIAL---SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               +L++ +   S +  A + ++VR  L ++P  Q  +A+ALGLT  +  R V  PQA+
Sbjct: 89  ----ALWVCVGVFSLWGTAEMGDLVRGALSSLPPHQRTSALALGLTRAQVFRYVEAPQAL 144

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           R ++P   + +  ++K +SLA  +   ++V VG  II ++ Q IE
Sbjct: 145 RRVLPGAINLFTRMVKTTSLAALISVMEVVKVGQQIIERS-QMIE 188


>gi|291276580|ref|YP_003516352.1| amino acid ABC transporter integral membrane protein [Helicobacter
           mustelae 12198]
 gi|290963774|emb|CBG39609.1| amino-acid ABC transporter integral membrane protein [Helicobacter
           mustelae 12198]
          Length = 218

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 52/88 (59%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  R GL +V + Q+E+A ALGL+ R+    V+LPQ++   +PPL +  + LLK 
Sbjct: 100 GSYMAESFRMGLESVAKSQIESAKALGLSTRQILGYVILPQSLIYALPPLAANVIFLLKE 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +S+  A+   D+V V   +I    +  E
Sbjct: 160 TSVVSAIALVDVVFVTKDLIGTYYKTKE 187


>gi|198242278|ref|YP_002216424.1| histidine ABC transporter permease HisM [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197936794|gb|ACH74127.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624176|gb|EGE30521.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 235

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLF 221


>gi|304398229|ref|ZP_07380103.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304354095|gb|EFM18468.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 238

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 107 LAFTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLN 389
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF  RL 
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF--RLA 224

Query: 390 AKIALKEKK 398
            +  L   K
Sbjct: 225 ERRWLAHVK 233


>gi|307728986|ref|YP_003906210.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583521|gb|ADN56919.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 224 ISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAA 279
           + T L+ G+P LVL+ L +   Q+  +       + +G   +  + F++    L     A
Sbjct: 52  VYTTLVRGVPDLVLMLLLFYSIQIWLNNLT----DMLGWEQIDIDPFVAGVAVLGFIYGA 107

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R   +AVPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  ++K ++
Sbjct: 108 YFTETFRGAFLAVPRGQLEAGAAYGMTSWQVFSRIMFPQMMRFALPGIGNNWQVMVKATA 167

Query: 340 LAVAVGFADLVS 351
           L   +G AD+V 
Sbjct: 168 LVSIIGLADVVK 179


>gi|260903453|ref|ZP_05911848.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AQ4037]
 gi|308110365|gb|EFO47905.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AQ4037]
          Length = 225

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G++EAA A G++     + ++LP A+R  +P  +++ + +L  S++A  V   DL 
Sbjct: 116 GLPKGEVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                + ++     E  L     Y+SL+ +I     R   +
Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMSLTFIILWCFKRAEKR 216


>gi|184158820|ref|YP_001847159.1| arginine ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|260554425|ref|ZP_05826646.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
 gi|294843461|ref|ZP_06788144.1| ABC-type arginine transport system, permease component
           [Acinetobacter sp. 6014059]
 gi|183210414|gb|ACC57812.1| ABC-type arginine transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|260410967|gb|EEX04264.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKI 180


>gi|49474282|ref|YP_032324.1| ABC transporter, permease protein [Bartonella quintana str.
           Toulouse]
 gi|49239786|emb|CAF26176.1| ABC transporter, permease protein [Bartonella quintana str.
           Toulouse]
          Length = 239

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 6/186 (3%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ--LHFDKPVLG 252
           +LG  L L +  + R    K  KA+  L+ S F   GLP L+ + L Y       + VL 
Sbjct: 35  ILGFPLGLLSALMIRS-DIKIVKAIATLFSSVFR--GLPELLTLFLVYYGLQKIIQTVLD 91

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FN     +++  F++  +ALS   AAF  E+         +GQ EAA ALG +      
Sbjct: 92  YFNIEIIFSINA-FIAGVLALSMVLAAFSCEVWLGAFNIFDKGQYEAAKALGFSRSTTFF 150

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ PQ +R+ +P L++ +L LLK++SL   +   DL+      +  T + +   L+   
Sbjct: 151 RIVFPQLIRNALPGLSNNWLTLLKDTSLVSTISLVDLMQQTNLAVAATNEPMLFYLVACL 210

Query: 373 IYLSLS 378
           +YL  S
Sbjct: 211 LYLLFS 216


>gi|292488871|ref|YP_003531758.1| histidine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900016|ref|YP_003539385.1| histidine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291199864|emb|CBJ46988.1| histidine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291554305|emb|CBA21655.1| Histidine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 238

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  E+    + AVP G++EAA A G +  K  R +++P A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEVFAGAIRAVPHGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ V   I + T Q      +   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKVARDINSATYQPFIAFSLAAVLYLIISYVLISLF 221


>gi|169334070|ref|ZP_02861263.1| hypothetical protein ANASTE_00463 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258787|gb|EDS72753.1| hypothetical protein ANASTE_00463 [Anaerofustis stercorihominis DSM
           17244]
          Length = 216

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 25/229 (10%)

Query: 173 NRGLSFPTLT--MDTNAKIFV----FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           N G  F  L+  M T+ +IFV    FS  LG+V++    R+S+       + L  +YIS 
Sbjct: 2   NLGAMFTDLSSGMVTSIEIFVLTLLFSLPLGLVVAF--GRMSKI---APVRWLVKIYIS- 55

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF--MSLYIALSCYTAAFIAEI 284
            ++ G P +    L+  + F  P      +I G  +S  +  +++ I  +   AA+ AEI
Sbjct: 56  -IMRGTPLM----LQLMVVFWGP-----YYIFGMQISSSYRMVAVLIGFAVNYAAYFAEI 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++P GQ EAA  LG    +   +++ PQ ++ I+P   ++ + L+K++SL+  +
Sbjct: 106 YRGGIESMPDGQYEAAKLLGYNKFQTFFIIIFPQVIKRILPATANEVITLVKDTSLSFVI 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ ++   I          I   +F Y+  + ++A  M  +  K++
Sbjct: 166 AIPEMFTMAKQIAAAQSSVAAFIAAGLFYYI-FNFIVAFVMEGIEKKLS 213


>gi|86357102|ref|YP_468994.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86281204|gb|ABC90267.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 248

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSG 288
           PTLV      QL F   VL  F  N +GG+  +P   F  +   +  + AA  AE +R+G
Sbjct: 84  PTLV------QLMFSFLVLNSFVSNLVGGAQNNPLTPFFWVVAMVGLHIAALHAEAIRAG 137

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP   +EAA  +G +  +  R V +P A R+ +P + +  +NL+K +++  A+  ++
Sbjct: 138 IEAVPASTVEAARGIGFSKLQILRYVEIPLAFRASLPAIVNNLINLVKLTTVGNAIAVSE 197

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +      +  Q    + ++++ +  +  +++++A
Sbjct: 198 ITYASIMVWTQRDNVVSLMIVILLFFSLINLVVA 231


>gi|83593587|ref|YP_427339.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83576501|gb|ABC23052.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 232

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 21/173 (12%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRH-FHEKTGKA-------LPLLYISTFLIFGLPTLVL 237
           K+ + +   G+VL L  T  +LSR+      G A       LP L +   + +G   LV 
Sbjct: 19  KLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGLPELLVVLIMYYGAEALVR 78

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
             +   L  D  V          ++SP ++   ++L     A+ +E+ R  ++A+PRG +
Sbjct: 79  WLVNDVLALDVAV----------SISP-YVGGVLSLGLIFGAYASEVFRGAILAIPRGHV 127

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           EAA A G+      R ++LPQ  R  +P L + +L  LK+++L  A+G  +L+
Sbjct: 128 EAARAFGMGPVLTYRRIILPQVWRVALPGLGNLFLVSLKDTALVSAIGLNELM 180


>gi|193077847|gb|ABO12724.2| Amino acid ABC transporter permease protein [Acinetobacter
           baumannii ATCC 17978]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKI 180


>gi|158425755|ref|YP_001527047.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332644|dbj|BAF90129.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 224

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 67/125 (53%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +   A+     A+  EI+R+G+ A PRGQ EA  +L +T  +  R V+L  A++ I 
Sbjct: 89  EMQAAIFAMVINLGAYGCEIIRAGIEATPRGQFEAGASLAMTRIQTFRHVVLVPALQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L+SQ + ++  S++   +   D+      I ++T +A E+ ++   +YL L++++   
Sbjct: 149 PALSSQIVIVMFGSAVCSQIAVEDITFAAQFIQSRTFRAFEVYILATILYLVLALVLRQV 208

Query: 385 MNRLN 389
           M  L 
Sbjct: 209 MRALG 213


>gi|116248755|ref|YP_764596.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253405|emb|CAK11793.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 223

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 65/117 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I 
Sbjct: 89  ELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  SS+   +   DL      I ++T +A E  ++   IYL L+I++
Sbjct: 149 PALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVLAILL 205


>gi|315652804|ref|ZP_07905778.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315485006|gb|EFU75414.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 221

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 28/175 (16%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIALSCYT 277
           PLL    F+ +GLP       K  +  D  V G     F+GGS                 
Sbjct: 66  PLLIQLFFIYYGLP-------KLGIKIDAFVCGVLGLAFLGGS----------------- 101

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++ E  RSG+ ++ + Q E+A++LGL+H +A   +LLPQA+    P   +  + LLK 
Sbjct: 102 --YMCEAFRSGIESIDKIQEESALSLGLSHNQALFYILLPQAVSISTPAFVANIIFLLKE 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +S+  A+   DL+     +I    + +E + + +F YL + + +++  + +  K+
Sbjct: 160 TSVFSAISLMDLMFTAKDLIGIYYKTVESLALLVFFYLIILLPVSILGSYVERKV 214


>gi|301595883|ref|ZP_07240891.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB059]
          Length = 218

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKI 180


>gi|161502503|ref|YP_001569615.1| hypothetical protein SARI_00547 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863850|gb|ABX20473.1| hypothetical protein SARI_00547 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 235

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLF 221


>gi|154246017|ref|YP_001416975.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154160102|gb|ABS67318.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 224

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 69/126 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A P+GQ EA  +L ++  +  R V+L  A++ I 
Sbjct: 89  EMQAAILAMVINLGAYACEIIRAGIEATPKGQFEAGASLAMSRVQTFRHVVLVPALQKIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L+SQ + ++  S++   +   +L      I ++T +A E  ++   +YL+L++++   
Sbjct: 149 PALSSQIVIVMFGSAVCSQISVEELTFAANFIQSRTFRAFEAYIVATVLYLALAVLVRQV 208

Query: 385 MNRLNA 390
           M  + A
Sbjct: 209 MRGIGA 214


>gi|323498050|ref|ZP_08103057.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326]
 gi|323316898|gb|EGA69902.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326]
          Length = 246

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EAA A G+    + R +LLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMGPVMSFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             +P   + +L LLK ++L   +G  D+V V
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRV 201


>gi|254455291|ref|ZP_05068720.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082293|gb|EDZ59719.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 228

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 5/156 (3%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           QL F   VL QF    G T+S     + I +  +   +++E+ R  L  VP+ Q EA  A
Sbjct: 72  QLFFVYFVLPQF----GITLSAWVCGM-ITIGLHFGTYLSEVYRGALEGVPKTQWEACRA 126

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L  +     R ++LPQA    IP + +  + + K++ L   +G A+L      +     +
Sbjct: 127 LNFSTFYTYRKIVLPQAFPIAIPGMGNYLVGIFKDTPLLSTIGVAELFHAATAVGGYNYR 186

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +E   I   I+L+LSI  A+++ +L   + L + K
Sbjct: 187 YLEPYTIVGIIFLTLSIPAAMWIRKLEKNVNLAQGK 222


>gi|266625007|ref|ZP_06117942.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288863102|gb|EFC95400.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 224

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S E  S+ I  + + AA ++++VR  LI++P  Q E+A ALGL+  ++ + ++LPQ
Sbjct: 86  GWDLSGELASV-IVFTVWGAAEMSDLVRGSLISIPIHQYESAEALGLSRIQSYQYIVLPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A+R +IP   +    ++K +SL + +G  +++ V   II 
Sbjct: 145 AVRRLIPLSINLITRMIKTTSLILMIGVVEVLKVAQQIIE 184


>gi|28897775|ref|NP_797380.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837351|ref|ZP_01990018.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|260363800|ref|ZP_05776555.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus K5030]
 gi|260876940|ref|ZP_05889295.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AN-5034]
 gi|260897918|ref|ZP_05906414.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus Peru-466]
 gi|28805988|dbj|BAC59264.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149749382|gb|EDM60155.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|308085473|gb|EFO35168.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus Peru-466]
 gi|308093859|gb|EFO43554.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AN-5034]
 gi|308113895|gb|EFO51435.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus K5030]
          Length = 225

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G++EAA A G++     + ++LP A+R  +P  +++ + +L  S++A  V   DL 
Sbjct: 116 GLPKGEVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                + ++     E  L     Y+SL+ +I     R   +
Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMSLTFIILWCFKRAEKR 216


>gi|116491637|ref|YP_811181.1| ABC-type amino acid transport system, permease component
           [Oenococcus oeni PSU-1]
 gi|290891246|ref|ZP_06554308.1| hypothetical protein AWRIB429_1698 [Oenococcus oeni AWRIB429]
 gi|116092362|gb|ABJ57516.1| amino acid ABC transporter membrane protein, PAAT family
           [Oenococcus oeni PSU-1]
 gi|290479210|gb|EFD87872.1| hypothetical protein AWRIB429_1698 [Oenococcus oeni AWRIB429]
          Length = 220

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 11/133 (8%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V P+  +  +      + + AEI R G+ A+P+ Q +AA  LG+  R+  + ++LPQ   
Sbjct: 83  VFPKMTAAVVVFILNYSGYFAEIFRGGIQAIPQAQYDAAGVLGINRRQTFQKIILPQVFN 142

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLS 376
            ++P   ++ +NL+K++SL   +   D++ +        G A+  + +  +     IYL 
Sbjct: 143 IVLPSFGNEIINLIKDTSLGYVISLVDILYIA------QGHAVADVTLLPYVIVAAIYLI 196

Query: 377 LSIMIALFMNRLN 389
            + +  L M R+ 
Sbjct: 197 FTALATLIMKRIE 209


>gi|328473249|gb|EGF44097.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 225

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G++EAA A G++     + ++LP A+R  +P  +++ + +L  S++A  V   DL 
Sbjct: 116 GLPKGEVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                + ++     E  L     Y+SL+ +I     R   +
Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMSLTFIILWCFKRAEKR 216


>gi|317406069|gb|EFV86333.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 245

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GGS V+P FM + I ++ +   F AE +R+G+ AVP   +EAA +L  + R+    V LP
Sbjct: 105 GGSPVTP-FMWVVIVVALHKGVFHAEALRAGIEAVPAVTLEAARSLAFSRRQILAQVQLP 163

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+R  +P L +  ++L+K +++A A+   D+
Sbjct: 164 LALRFALPALVNNLVDLVKMTAIASAIAVGDV 195


>gi|312173030|emb|CBX81285.1| Histidine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 238

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  E+    + AVP G++EAA A G +  K  R +++P A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEVFAGAIRAVPHGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ V   I + T Q      +   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKVARDINSATYQPFIAFSLAAVLYLIISYVLISLF 221


>gi|212716830|ref|ZP_03324958.1| hypothetical protein BIFCAT_01773 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660115|gb|EEB20690.1| hypothetical protein BIFCAT_01773 [Bifidobacterium catenulatum DSM
           16992]
          Length = 224

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 51/83 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P+ Q E+A  LGL+  +    V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALESIPKAQYESAYVLGLSGWQTFVKVILPQALRRLLPASVNLATRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|169795313|ref|YP_001713106.1| histidine transport system permease ABC transporter membrane
           protein [Acinetobacter baumannii AYE]
 gi|213158700|ref|YP_002319998.1| histidine transport system permease protein HisQ [Acinetobacter
           baumannii AB0057]
 gi|215482846|ref|YP_002325049.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB307-0294]
 gi|294838851|ref|ZP_06783534.1| Histidine transport system permease protein hisQ [Acinetobacter sp.
           6013113]
 gi|294858197|ref|ZP_06795966.1| Histidine transport system permease protein hisQ [Acinetobacter sp.
           6013150]
 gi|301347433|ref|ZP_07228174.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB056]
 gi|301512551|ref|ZP_07237788.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB058]
 gi|169148240|emb|CAM86103.1| Histidine transport system permease protein (ABC superfamily,
           membrane) [Acinetobacter baumannii AYE]
 gi|213057860|gb|ACJ42762.1| histidine transport system permease protein HisQ [Acinetobacter
           baumannii AB0057]
 gi|213986170|gb|ACJ56469.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB307-0294]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKI 180


>gi|149010669|ref|ZP_01832040.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|303255871|ref|ZP_07341912.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|303259974|ref|ZP_07345948.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303261380|ref|ZP_07347328.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264047|ref|ZP_07349968.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303266939|ref|ZP_07352815.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303269237|ref|ZP_07355013.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|147765150|gb|EDK72079.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|301801565|emb|CBW34260.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae INV200]
 gi|302597255|gb|EFL64360.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|302637514|gb|EFL68001.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638893|gb|EFL69354.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302641244|gb|EFL71615.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302643513|gb|EFL73784.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646452|gb|EFL76678.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
          Length = 225

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  MFGTVMGIIMT---------SHSRIIRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S+ I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SVIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTTSF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|88601347|ref|YP_501525.1| amino acid ABC transporter permease [Methanospirillum hungatei
           JF-1]
 gi|88186809|gb|ABD39806.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Methanospirillum hungatei JF-1]
          Length = 218

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ +E +R  +++V  GQ+ AA ALG+T  +A   ++LPQA+R  IP ++++++ L+K 
Sbjct: 100 SAYNSEYIRGSILSVKEGQLIAAKALGMTKNQAILNIVLPQALRRSIPGISNEFIYLIKY 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           SSLA  +   +L      I  +     E  +    +YL L  +     N L  K A+
Sbjct: 160 SSLAYMITVIELTGASKLIATKYFAYNETFIAVAIVYLLLVTITTFGANALEKKYAI 216


>gi|170691907|ref|ZP_02883071.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143191|gb|EDT11355.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 8/132 (6%)

Query: 224 ISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAA 279
           + T L+ G+P LVL+ L +   Q+  +       + +G   +  + F++    L     A
Sbjct: 52  VYTTLVRGVPDLVLMLLLFYSIQIWLNNLT----DLLGWDQIDIDPFVAGVAVLGFIYGA 107

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R   +AVPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  ++K ++
Sbjct: 108 YFTETFRGAFLAVPRGQLEAGAAYGMTSWQVFARIMFPQMMRFALPGIGNNWQVMVKATA 167

Query: 340 LAVAVGFADLVS 351
           L   +G AD+V 
Sbjct: 168 LVSIIGLADVVK 179


>gi|204929308|ref|ZP_03220451.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|204321852|gb|EDZ07051.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|322617097|gb|EFY14003.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617597|gb|EFY14496.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624773|gb|EFY21602.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322630323|gb|EFY27093.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634503|gb|EFY31236.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322639214|gb|EFY35906.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322640077|gb|EFY36744.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322645703|gb|EFY42227.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652067|gb|EFY48430.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656239|gb|EFY52536.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659391|gb|EFY55638.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322665851|gb|EFY62034.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669910|gb|EFY66051.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322678654|gb|EFY74710.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322683551|gb|EFY79565.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322687626|gb|EFY83596.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323193539|gb|EFZ78744.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198446|gb|EFZ83548.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323204558|gb|EFZ89561.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208504|gb|EFZ93443.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323213642|gb|EFZ98431.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218323|gb|EGA03033.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222922|gb|EGA07271.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323224503|gb|EGA08785.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323232318|gb|EGA16421.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235648|gb|EGA19732.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323241192|gb|EGA25228.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323244934|gb|EGA28936.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323250053|gb|EGA33947.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323253837|gb|EGA37662.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323254974|gb|EGA38765.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323259839|gb|EGA43471.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264140|gb|EGA47647.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323270838|gb|EGA54276.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
          Length = 235

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLF 221


>gi|15802855|ref|NP_288882.1| histidine transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|15832446|ref|NP_311219.1| histidine transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|168748160|ref|ZP_02773182.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4113]
 gi|168755063|ref|ZP_02780070.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761251|ref|ZP_02786258.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767937|ref|ZP_02792944.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4486]
 gi|168772963|ref|ZP_02797970.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4196]
 gi|168780166|ref|ZP_02805173.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787218|ref|ZP_02812225.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC869]
 gi|168798481|ref|ZP_02823488.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC508]
 gi|195935687|ref|ZP_03081069.1| histidine transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809152|ref|ZP_03251489.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208813542|ref|ZP_03254871.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820591|ref|ZP_03260911.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398746|ref|YP_002271717.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4115]
 gi|217327256|ref|ZP_03443339.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. TW14588]
 gi|254794201|ref|YP_003079038.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|261223237|ref|ZP_05937518.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259213|ref|ZP_05951746.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|12516664|gb|AAG57437.1|AE005462_12 histidine transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13362662|dbj|BAB36615.1| histidine transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187771032|gb|EDU34876.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4196]
 gi|188017229|gb|EDU55351.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4113]
 gi|189002113|gb|EDU71099.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4076]
 gi|189357714|gb|EDU76133.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4401]
 gi|189362954|gb|EDU81373.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4486]
 gi|189368266|gb|EDU86682.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4501]
 gi|189372848|gb|EDU91264.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC869]
 gi|189378936|gb|EDU97352.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC508]
 gi|208728953|gb|EDZ78554.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208734819|gb|EDZ83506.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208740714|gb|EDZ88396.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160146|gb|ACI37579.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4115]
 gi|209764888|gb|ACI80756.1| histidine transport system permease protein [Escherichia coli]
 gi|209764890|gb|ACI80757.1| histidine transport system permease protein [Escherichia coli]
 gi|209764892|gb|ACI80758.1| histidine transport system permease protein [Escherichia coli]
 gi|209764896|gb|ACI80760.1| histidine transport system permease protein [Escherichia coli]
 gi|217319623|gb|EEC28048.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. TW14588]
 gi|254593601|gb|ACT72962.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Escherichia coli O157:H7
           str. TW14359]
 gi|320192068|gb|EFW66713.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC1212]
 gi|320641136|gb|EFX10615.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O157:H7 str. G5101]
 gi|320646524|gb|EFX15443.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O157:H- str. 493-89]
 gi|320651621|gb|EFX20001.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O157:H- str. H 2687]
 gi|320667893|gb|EFX34801.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326339661|gb|EGD63472.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. 1125]
 gi|326344123|gb|EGD67884.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. 1044]
          Length = 228

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAARAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 217



 Score = 39.7 bits (91), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|194432940|ref|ZP_03065224.1| histidine ABC transporter, permease protein HisM [Shigella
           dysenteriae 1012]
 gi|194418928|gb|EDX35013.1| histidine ABC transporter, permease protein HisM [Shigella
           dysenteriae 1012]
 gi|332090068|gb|EGI95167.1| histidine transport system permease protein hisM [Shigella
           dysenteriae 155-74]
          Length = 238

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA     +DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVSDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|295700416|ref|YP_003608309.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Burkholderia sp. CCGE1002]
 gi|295439629|gb|ADG18798.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. CCGE1002]
          Length = 219

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 73/128 (57%), Gaps = 1/128 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +A+  + A + AE+ R+G+ ++PRGQ EAA A  L+  +A + V+LP+A+  +
Sbjct: 86  PALAAGVLAIGVHYATYAAEVYRAGIESIPRGQWEAAKACNLSPAQAWQHVILPEAVPPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  +++ K + L  A+   +L++    I N   + +E + +   ++L +S +IA+
Sbjct: 146 VPALANYLISMFKETPLLSAITVLELMNQAKIIANTDYRYLEPMTLVGVLFLIIS-LIAV 204

Query: 384 FMNRLNAK 391
              RL  K
Sbjct: 205 ACVRLLEK 212


>gi|261247558|emb|CBG25385.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
          Length = 235

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLF 221


>gi|317054118|ref|YP_004118143.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952113|gb|ADU71587.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 11/178 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL---GQFNFIGGSTVSPEF---MSLYIALSCYTAA 279
           T L  G+P LVL+ L +   +  P L   G  N   G   S EF   ++  + L     A
Sbjct: 53  TLLARGIPDLVLMLLVF---YSVPALLNSGLENI--GLNYSVEFSPFIASLVTLGFIFGA 107

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ E  R  L  +P  ++EAA A G T R     ++LPQ +R  +P  T+ +L L+K ++
Sbjct: 108 YMTETFRYALTNIPHSEIEAAQAFGFTGRAIFLRIILPQLIRLALPGFTNNWLVLVKATA 167

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LA  +G  D++         TG+     L+    YL+++++    ++RL+ +  L  +
Sbjct: 168 LASLLGLQDIMFSAKGAAESTGKPFTFYLLAAGFYLAVTLLSVAALHRLSLRYTLAVR 225


>gi|167587517|ref|ZP_02379905.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Burkholderia ubonensis Bu]
          Length = 255

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 67/122 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   + ++A I+R  +  VP G++EA  A G+T  +  R ++ P+A R  +P LT +
Sbjct: 106 VALSVNESTYVATILRGAIAGVPAGEIEAGHAYGMTRVQVLRRIVGPRAWRLALPALTGE 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++ LA  V   D++    T+  +T +  E +     +Y++L  ++ +   RL  
Sbjct: 166 AILLLKSTVLASTVTVFDVLGTANTLRFETLRVYEPLAGAAIVYVALVALLTIPAARLEK 225

Query: 391 KI 392
           ++
Sbjct: 226 RV 227


>gi|71064874|ref|YP_263601.1| ABC basic amino acid transporter, inner membrane subunit
           [Psychrobacter arcticus 273-4]
 gi|71037859|gb|AAZ18167.1| ABC basic amino acid transporter, inner membrane subunit
           [Psychrobacter arcticus 273-4]
          Length = 244

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 22/214 (10%)

Query: 188 KIFVFSFVLGIVLSLFAT--RLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVL 237
           ++ V S ++G+VL L     +LS  +        +  T + +P L +  F+ +G   L++
Sbjct: 20  QLAVTSLIIGMVLGLLGATAKLSNIWLLRKIATVYTATMRGIPELLLVLFIYYGGSILLM 79

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
             LK          G  +++  S      M+L IA   Y      EI R  +  +P GQ 
Sbjct: 80  SILKK--------FGYNDYVEISAFWGGVMALSIAFGAYAT----EIFRMSIQEIPIGQQ 127

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A+G+   +    + LPQ  +  +P L + +L LLK+++L   VG  D++       
Sbjct: 128 EAAQAIGMRPFQTFYRITLPQVWQIALPGLGNLFLVLLKDTALVSVVGLKDIMYQSSRAA 187

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             T Q     +    IYL L+++I  FM  L  +
Sbjct: 188 QSTQQPFTFYMAAAIIYLGLTMLITGFMMWLEWR 221


>gi|302386910|ref|YP_003822732.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302197538|gb|ADL05109.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 219

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 24/161 (14%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +  PLL    FL FGLP + ++     L  +   +    F+GGS             
Sbjct: 58  EVSRNTPLLIQLFFLYFGLPKIGVV-----LSSESCAVTGLAFLGGS------------- 99

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                 ++AE  R+G+  VP  Q E+ ++LGLT  +  R ++LPQA+ + +P   +  + 
Sbjct: 100 ------YMAEAFRTGMEQVPVIQSESGLSLGLTKGQVFRHIILPQAVTTSVPVFCANIIF 153

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           L+K +S+  AV  ADL+ V   +I    +  E +L+ +  Y
Sbjct: 154 LIKETSVFSAVALADLMFVAKDLIGIYYKTDEALLMLVAAY 194


>gi|268681106|ref|ZP_06147968.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID332]
 gi|268621390|gb|EEZ53790.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID332]
          Length = 225

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 52/87 (59%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S +  A + ++VR  L ++ + Q+E+ +A GL+  +  R + LPQ++R ++P   + +  
Sbjct: 100 SLWGVAEMGDLVRGALESIEKHQVESGLAPGLSRGQVFRCIELPQSIRRVLPGAVNLFTR 159

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++K SSLA  +G  ++V VG  II  +
Sbjct: 160 MIKTSSLAWLIGVIEVVKVGQQIIENS 186


>gi|23098013|ref|NP_691479.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776237|dbj|BAC12514.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 234

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVL 237
           +T+      F+F+ + G   + FA R+         K  P  +I T+    I   P LV 
Sbjct: 22  ITVGLTISCFLFAMIFGFFWT-FARRV---------KNRPFNFIVTWTMEFIRSTPPLVQ 71

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +   Y      PV+G        T+ P F+   + L  + + +I EI RSG+ +V +GQ 
Sbjct: 72  LFFIYFAFPSVPVIGM-------TLHP-FVCAVLGLGIHFSTYIGEIYRSGIESVEKGQW 123

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA+ +L  +     R ++LPQA+   IP L + ++ + K   +   +    ++ +  T  
Sbjct: 124 EASTSLNFSTLDKWRKIILPQAIPPTIPMLGNYFIIMFKEVPITSTISVGGIMLMARTYG 183

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            Q    +E I I   I+L LS   A+ + +L  K
Sbjct: 184 AQNWSYLEPITIVGIIFLLLSYPSAVLIKKLELK 217


>gi|319782302|ref|YP_004141778.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168190|gb|ADV11728.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 244

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 65/111 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  TAA+ +EI+R GL++VP G +EAA A G++     R +  P A+R  +P   ++
Sbjct: 100 LALALNTAAYTSEILRGGLMSVPVGLVEAAQACGMSRMLRFRRIEFPLAIRQALPAYGNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + ++K +SLA  +   ++      +++QT    EI  I   +YL +++++
Sbjct: 160 LILVVKGTSLASTITVLEITGYAKRLMSQTFAIFEIFAIAGVLYLVINLLL 210


>gi|302060016|ref|ZP_07251557.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
          Length = 231

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 5/171 (2%)

Query: 214 KTGKALPLLYIS---TFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSL 269
           KT    PL ++    + L+ G+P L+ + L Y    +    LG++  I    +S  F + 
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNGMRALGEWLGIPNLALS-AFAAG 99

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L +
Sbjct: 100 VIALGLCFGAYATEVFRGEILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGN 159

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++
Sbjct: 160 LFMILMKDTALVSVIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVL 210


>gi|213052557|ref|ZP_03345435.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 232

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 104 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 163

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 164 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLF 218


>gi|149191455|ref|ZP_01869705.1| Putative arginine ABC transporter, permease protein [Vibrio
           shilonii AK1]
 gi|148834724|gb|EDL51711.1| Putative arginine ABC transporter, permease protein [Vibrio
           shilonii AK1]
          Length = 223

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF  I  S +      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFEVIRESFLWTWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+   KAT  VLLP A+R  IP  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-DMKATLRVLLPFAIRRAIPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   D++     I  QT   + +  +    YL ++ ++ L   ++  K
Sbjct: 167 TITIMDIMGYAQRINAQTYDTLVVFSVAGLFYLGVNGILTLIFRQVEKK 215


>gi|237732340|ref|ZP_04562821.1| histidine transport system permease [Citrobacter sp. 30_2]
 gi|226907879|gb|EEH93797.1| histidine transport system permease [Citrobacter sp. 30_2]
          Length = 235

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKLYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|169350594|ref|ZP_02867532.1| hypothetical protein CLOSPI_01363 [Clostridium spiroforme DSM 1552]
 gi|169292914|gb|EDS75047.1| hypothetical protein CLOSPI_01363 [Clostridium spiroforme DSM 1552]
          Length = 523

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 71/126 (56%), Gaps = 4/126 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           ++  T A++AEI+RSG+ AV +GQ EAA ++G+   +    ++LPQA+++  P + ++++
Sbjct: 389 ITINTGAYMAEIIRSGIQAVDKGQSEAARSIGMNSVQTMLYIVLPQAIKNSFPAIGNEFV 448

Query: 333 NLLKNSS----LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             +K+SS    +AV   F    SV G++         + LI++ +    + ++     R+
Sbjct: 449 INIKDSSVLNVIAVTELFYQAKSVAGSLYAFVPTYFVVALIYLCLTFPTTRILNYIEKRM 508

Query: 389 NAKIAL 394
           N K A+
Sbjct: 509 NRKKAI 514


>gi|165920615|ref|ZP_02219586.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA
           334]
 gi|165916817|gb|EDR35421.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA
           334]
          Length = 223

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+I G P LV I + Y         GQF++    I  S +   F    IAL+  T+A+  
Sbjct: 55  FIIRGTPLLVQIFIIYYGS------GQFHWLRETILWSVLKRPFGCAVIALAINTSAYTT 108

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            ++R  + ++P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA 
Sbjct: 109 VLLRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAG 168

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+  +
Sbjct: 169 TITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQ 221


>gi|145299601|ref|YP_001142442.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           component [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142852373|gb|ABO90694.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           component [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 246

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 26/148 (17%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL----------GQFNFIGGSTVSPEFMSL---YIA 272
           T +I G+P LVL+ L   L F   VL             NF+  S  + E++SL   YI 
Sbjct: 55  TTVIRGIPDLVLMML---LFFGGQVLINSVCTWVNETYNNFLLESNPNQEWVSLLPDYID 111

Query: 273 LSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +S + A          A++ E  R  ++AV +G++EAA A G+   +    +L PQ MR 
Sbjct: 112 ISPFAAGVATIGFIFGAYMTETFRGAILAVDKGELEAARAFGMRATQVFVRILFPQMMRH 171

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P   + +L LLK ++L   +G  D+V
Sbjct: 172 ALPGFGNNWLVLLKTTALVSIIGLDDMV 199


>gi|330831199|ref|YP_004394151.1| arginine ABC transporter permease ArtQ [Aeromonas veronii B565]
 gi|328806335|gb|AEB51534.1| Arginine ABC transporter, permease protein ArtQ [Aeromonas veronii
           B565]
          Length = 216

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 19/164 (11%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFDK 248
           S V G+VL+L  +  +    +K     P+  ++T LI GLP L+++   Y    Q+ F  
Sbjct: 19  SLVGGMVLALAFS--AAELSKKRALVWPVATLTT-LIRGLPELLVVLFIYFGSTQVLF-- 73

Query: 249 PVLGQFNFIGGSTV--SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                   I G  V  SP F    +ALS   A++  + +R+ L AVP GQ  AA+ALGL+
Sbjct: 74  -------LITGEYVEFSP-FACGVLALSLLFASYATQTLRAALNAVPAGQRLAALALGLS 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
                  ++LPQA R  +P L +Q+L LLK+++L   +G  +++
Sbjct: 126 KSHIFFRIVLPQAWRHALPGLGNQWLVLLKDTALVSLIGVNEMM 169


>gi|299769348|ref|YP_003731374.1| ABC-type arginine transport system, permease component
           [Acinetobacter sp. DR1]
 gi|298699436|gb|ADI90001.1| ABC-type arginine transport system, permease component
           [Acinetobacter sp. DR1]
          Length = 229

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VP GQ+EAA+A G+T  +  R VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPTGQIEAAMAYGMTPWQVFRRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  L+K ++L   +G  D+V +       T Q     ++   IYL+++ +  L +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKITQDAGRSTMQLFFFSIVAAAIYLAITTVSNLIL 213

Query: 386 NRLNAKIALKEKK 398
             L  + +   +K
Sbjct: 214 MWLERRYSAGVRK 226


>gi|326789990|ref|YP_004307811.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326540754|gb|ADZ82613.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 219

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 27/153 (17%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL +GLP L                       G  +S E  ++ I L+    +
Sbjct: 64  PLLIQLFFLYYGLPKL-----------------------GVKISAETCAV-IGLTFLGGS 99

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE  RSGL AV + Q+E+ +++GL   +  + V+LPQA    +P + +  + LLK +S
Sbjct: 100 YMAEAFRSGLEAVSKSQIESGLSIGLNEWQLIQHVILPQAFAVAMPGIGANIIFLLKETS 159

Query: 340 LAVAVGFADLVSVGGTIIN---QTGQAIEIILI 369
           +  AV  ADL+ V   +I    +T +A+ +++I
Sbjct: 160 IFSAVALADLMFVAKDLIGMYYKTDEALFLLVI 192


>gi|283832262|ref|ZP_06352003.1| amino acid ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
 gi|291071904|gb|EFE10013.1| amino acid ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
          Length = 235

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKLYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|241113598|ref|YP_002973433.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861806|gb|ACS59472.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 223

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 65/117 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I 
Sbjct: 89  ELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  SS+   +   DL      I ++T +A E  ++   IYL L+I++
Sbjct: 149 PALSSQVVIVMLGSSVVSQIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVLAILL 205


>gi|154705949|ref|YP_001424930.1| hypothetical protein CBUD_1592 [Coxiella burnetii Dugway 5J108-111]
 gi|154355235|gb|ABS76697.1| hypothetical protein CBUD_1592 [Coxiella burnetii Dugway 5J108-111]
          Length = 223

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+I G P LV I + Y         GQF++    I  S +   F    IAL+  T+A+  
Sbjct: 55  FIIRGTPLLVQIFIIYYGS------GQFHWLRETILWSVLKRPFGCAVIALAINTSAYTT 108

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            ++R  + ++P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA 
Sbjct: 109 VLLRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAG 168

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+  +
Sbjct: 169 TITLMDIMGVTRHLIAMTYEVIPLFFLVGIIYFVLNALIMSVFYFLEKKLTFQ 221


>gi|330891107|gb|EGH23768.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 262

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 10/133 (7%)

Query: 233 PTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LVLI    Y   F+  V G +         P+++ + + L+   +A +AEI R  + +
Sbjct: 102 PWLVLIYFTTYVFPFEIKVAGTY------IAFPDWVKVTLGLALPASANVAEIFRGAVAS 155

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P  Q EAA +L  T  +  R ++LPQ ++ ++PP  + Y  +   ++LA  VG  D++ 
Sbjct: 156 IPATQWEAARSLAFTRGQIFRSIILPQCLKRMLPPWMNLYAVITMGTALASLVGVHDVID 215

Query: 352 ---VGGTIINQTG 361
              +    +NQT 
Sbjct: 216 TAQIASNTVNQTS 228



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 18/128 (14%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++ A+  GF     ++   +   +I G LVGA  LS  +L+    R++V+VFRN P LV
Sbjct: 46  QWSPALAAGFAQNILISLVAITLGSIFGLLVGALGLSPFRLLRLPARLWVQVFRNAPWLV 105

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP-----TLTMDTNAKIFVFSFVLGI 198
           +I+F              + V PF + +    ++FP     TL +   A   V     G 
Sbjct: 106 LIYF-------------TTYVFPFEIKVAGTYIAFPDWVKVTLGLALPASANVAEIFRGA 152

Query: 199 VLSLFATR 206
           V S+ AT+
Sbjct: 153 VASIPATQ 160


>gi|254492737|ref|ZP_05105908.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268600325|ref|ZP_06134492.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID18]
 gi|268602557|ref|ZP_06136724.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID1]
 gi|268685586|ref|ZP_06152448.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|226511777|gb|EEH61122.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268584456|gb|EEZ49132.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID18]
 gi|268586688|gb|EEZ51364.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID1]
 gi|268625870|gb|EEZ58270.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 225

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 52/87 (59%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S +  A + ++VR  L ++ + Q+E+ +A GL+  +  R + LPQ++R ++P   + +  
Sbjct: 100 SLWGVAEMGDLVRGALESIEKHQVESGLAPGLSRGQVFRCIELPQSIRRVLPGAVNLFTR 159

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++K SSLA  +G  ++V VG  II  +
Sbjct: 160 MIKTSSLAWLIGVIEVVKVGQQIIENS 186


>gi|220922366|ref|YP_002497668.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219946973|gb|ACL57365.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 217

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 11/164 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P +V +   + ++F  P  G    I  + V    + L +A S Y A    E  R+
Sbjct: 61  VIRGIPIIVQL---FYIYFVLPDFG----IALTAVQAGVLGLGLAYSAYQA----ENFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+ +GQ+EAA  +G+      R V+LPQA+R  +PP  +  + +LK+SS A  +  A
Sbjct: 110 AIEAIDKGQIEAAQTIGMGWGLTMRRVVLPQALRIALPPYGNVMIMMLKDSSQASTITVA 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   G  I + T +   +  +   +YL+LS+ + L +     +
Sbjct: 170 ELALQGKLIASATFKNTSVFTLVALMYLTLSLPLILIVRHFEKR 213


>gi|16761277|ref|NP_456894.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765679|ref|NP_461294.1| histidine/lysine/arginine/ornithine transport protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29141027|ref|NP_804369.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56412751|ref|YP_149826.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62180923|ref|YP_217340.1| histidine and lysine/arginine/ornithine ABC transporter [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161612915|ref|YP_001586880.1| hypothetical protein SPAB_00621 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549643|ref|ZP_02343402.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167993039|ref|ZP_02574134.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168229727|ref|ZP_02654785.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168237376|ref|ZP_02662434.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242476|ref|ZP_02667408.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261626|ref|ZP_02683599.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465939|ref|ZP_02699809.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168817912|ref|ZP_02829912.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194444404|ref|YP_002041615.1| histidine ABC transporter permease protein HisM [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194447914|ref|YP_002046407.1| histidine ABC transporter permease HisM [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470447|ref|ZP_03076431.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194735740|ref|YP_002115422.1| histidine ABC transporter permease HisM [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251061|ref|YP_002147312.1| histidine ABC transporter permease HisM [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197361685|ref|YP_002141321.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|200389110|ref|ZP_03215722.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|207857770|ref|YP_002244421.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213023864|ref|ZP_03338311.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213417109|ref|ZP_03350253.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213426992|ref|ZP_03359742.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213581829|ref|ZP_03363655.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213612824|ref|ZP_03370650.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213649620|ref|ZP_03379673.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|224583160|ref|YP_002636958.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238912368|ref|ZP_04656205.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289827473|ref|ZP_06546085.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|61225731|sp|P0A2I7|HISM_SALTY RecName: Full=Histidine transport system permease protein hisM
 gi|61225732|sp|P0A2I8|HISM_SALTI RecName: Full=Histidine transport system permease protein hisM
 gi|25296628|pir||AF0800 histidine transport system permease STY2582 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154127|gb|AAA75580.1| M protein [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|1000516|emb|CAA24661.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16420894|gb|AAL21253.1| histidine and lysine/arginine/ornithine transport protein
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|16503576|emb|CAD07584.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136652|gb|AAO68218.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56127008|gb|AAV76514.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62128556|gb|AAX66259.1| ABC superfamily (membrane),histidine and lysine/arginine/ornithine
           transport protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161362279|gb|ABX66047.1| hypothetical protein SPAB_00621 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403067|gb|ACF63289.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194406218|gb|ACF66437.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194456811|gb|EDX45650.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194711242|gb|ACF90463.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631500|gb|EDX50060.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197093161|emb|CAR58605.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197214764|gb|ACH52161.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197289695|gb|EDY29058.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|199606208|gb|EDZ04753.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|205325332|gb|EDZ13171.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205328839|gb|EDZ15603.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205335889|gb|EDZ22653.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205338649|gb|EDZ25413.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205344787|gb|EDZ31551.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205349394|gb|EDZ36025.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709573|emb|CAR33918.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224467687|gb|ACN45517.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|267994452|gb|ACY89337.1| histidine/lysine/arginine/ornithine transport protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158910|emb|CBW18423.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312913343|dbj|BAJ37317.1| histidine ABC transporter permease protein HisM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320086787|emb|CBY96559.1| Octopine transport system permease protein occM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321222947|gb|EFX48018.1| Histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322715401|gb|EFZ06972.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323130683|gb|ADX18113.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|223499|prf||0809313A protein M
          Length = 235

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLF 221


>gi|295700417|ref|YP_003608310.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Burkholderia sp. CCGE1002]
 gi|295439630|gb|ADG18799.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. CCGE1002]
          Length = 219

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 71/137 (51%), Gaps = 1/137 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G T++P   +  +AL     A+ AE+VR  + A+   Q  A IAL L+  +  R V+L
Sbjct: 76  MAGLTLTP-LQAGVLALGLNVGAYGAEVVRGAVAAIGHEQRSACIALNLSRYQRMRHVIL 134

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+  ++P   +  + LLK +++   +   D+      + +QTG  +      + +Y  
Sbjct: 135 PQALPLMLPTFGNNAIELLKGTAVVSLISLGDMTFQAQVVRSQTGNTLIPFATILALYFG 194

Query: 377 LSIMIALFMNRLNAKIA 393
           ++ +I+  M +L ++++
Sbjct: 195 MACLISFGMRKLESRMS 211


>gi|257488010|ref|ZP_05642051.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|330985959|gb|EGH84062.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331008684|gb|EGH88740.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 262

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 10/133 (7%)

Query: 233 PTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LVLI    Y   F+  V G +         P+++ + + L+   +A +AEI R  + +
Sbjct: 102 PWLVLIYFTTYVFPFEIKVAGTY------IAFPDWVKVTLGLALPASANVAEIFRGAVAS 155

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P  Q EAA +L  T  +  R ++LPQ ++ ++PP  + Y  +   ++LA  VG  D++ 
Sbjct: 156 IPATQWEAARSLAFTRGQIFRSIILPQCLKRMLPPWMNLYAVITMGTALASLVGVHDVID 215

Query: 352 ---VGGTIINQTG 361
              +    +NQT 
Sbjct: 216 TAQIASNTVNQTS 228



 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 18/128 (14%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++ A+  GF     ++   +   +I G LVGA  LS  +L+    R++V+VFRN P LV
Sbjct: 46  QWSPALAAGFAQNILISLVAIALGSIFGLLVGALGLSPFRLLRLPARLWVQVFRNAPWLV 105

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP-----TLTMDTNAKIFVFSFVLGI 198
           +I+F              + V PF + +    ++FP     TL +   A   V     G 
Sbjct: 106 LIYF-------------TTYVFPFEIKVAGTYIAFPDWVKVTLGLALPASANVAEIFRGA 152

Query: 199 VLSLFATR 206
           V S+ AT+
Sbjct: 153 VASIPATQ 160


>gi|240126635|ref|ZP_04739521.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae SK-92-679]
 gi|268685216|ref|ZP_06152078.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268625500|gb|EEZ57900.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-92-679]
          Length = 222

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 52/87 (59%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S +  A + ++VR  L ++ + Q+E+ +A GL+  +  R + LPQ++R ++P   + +  
Sbjct: 97  SLWGVAEMGDLVRGALESIEKHQVESGLAPGLSRGQVFRCIELPQSIRRVLPGAVNLFTR 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++K SSLA  +G  ++V VG  II  +
Sbjct: 157 MIKTSSLAWLIGVIEVVKVGQQIIENS 183


>gi|197295286|ref|YP_002153827.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944765|emb|CAR57370.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 255

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 67/122 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A++A I+R  +  VP G++EA  A G+T  +  R ++ P+A R  +P LT +
Sbjct: 106 VALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTRMQVLRRIVGPRAWRLALPALTGE 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++ LA  V   D++    T+  +T +  E +     +Y+ L  ++ +   R+  
Sbjct: 166 AILLLKSTVLASTVTVFDVMGTANTLRFETLRVYEPLAGAAIVYVVLVALLTIPAARVEQ 225

Query: 391 KI 392
           +I
Sbjct: 226 RI 227


>gi|161831065|ref|YP_001596414.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA
           331]
 gi|161762932|gb|ABX78574.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA
           331]
          Length = 223

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 10/173 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNF----IGGSTVSPEFMSLYIALSCYTAAFIA 282
           F+I G P LV I + Y         GQF++    I  S +   F    IAL+  T+A+  
Sbjct: 55  FIIRGTPLLVQIFIIYYGS------GQFHWLRETILWSVLKRPFGCAIIALAINTSAYTT 108

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            ++R  + ++P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA 
Sbjct: 109 VLLRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAG 168

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+  +
Sbjct: 169 TITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKLTFQ 221


>gi|317182238|dbj|BAJ60022.1| amino acid ABC transporter permease [Helicobacter pylori F57]
          Length = 237

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++    +     +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 44  IISFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233


>gi|294679057|ref|YP_003579667.1| polar amino acid ABC transporter permease [Rhodobacter capsulatus
           SB 1003]
 gi|294477873|gb|ADE87260.1| polar amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 222

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 68/127 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +AL+ + +AF  E  R+GL +V R    A+ +LGL   +   LV++P A+RS +P
Sbjct: 89  FWSGVLALTVWASAFHVESFRAGLSSVSRDIRNASASLGLRPWQHALLVVIPIALRSALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  +  +KNS+   A+G  +L  V    I Q  ++IE+ L    IYL + + ++   
Sbjct: 149 STLNTVVGTIKNSAYLQAIGLVELTFVAVDRIAQDFRSIEMFLSICVIYLVVILGVSALG 208

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 209 RRLEKRL 215


>gi|193084290|gb|ACF09949.1| glutamine transport ATP-binding protein glnQ [uncultured marine
           group II euryarchaeote KM3-130-D10]
          Length = 552

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 48/78 (61%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + + + + +    +   +IAE++R GL +V  GQ EAAIALGL+  +    V LP A+R+
Sbjct: 408 AEDIIRMLLMFGVFGGCYIAEVLRGGLQSVDSGQKEAAIALGLSPFQTKMTVELPNAVRT 467

Query: 323 IIPPLTSQYLNLLKNSSL 340
            +P + S ++ L K+++L
Sbjct: 468 TLPSIVSVFIGLWKDTTL 485


>gi|187926112|ref|YP_001892457.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|241665600|ref|YP_002983959.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|187727866|gb|ACD29030.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|240867627|gb|ACS65287.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 257

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 53/81 (65%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I + + +GL AV  GQ  AA+ALG++  +A   V+LPQA R ++P L +Q+++ +K++S
Sbjct: 115 YITQSMEAGLRAVGAGQRNAALALGMSPPQALLTVVLPQAWRIMLPSLANQWVSTVKDTS 174

Query: 340 LAVAVGFADLVSVGGTIINQT 360
           LA  VG  +L +    + ++T
Sbjct: 175 LAYIVGVVELSTAASQVNSRT 195


>gi|163800420|ref|ZP_02194321.1| arginine ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175863|gb|EDP60657.1| arginine ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 222

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAE 283
           L  G P LV I L Y      P  GQF+ +  S     +S  +    +AL+  TAA+ A+
Sbjct: 55  LFTGTPLLVQIFLVYY----GP--GQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSAQ 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + +    A+P GQ +A  ALG+  + AT  VLLP A+R  +P  +++ + + K +SLA  
Sbjct: 109 LFKGAFNAIPSGQWQACRALGM-GKIATLGVLLPYAIRRAVPAYSNEVILVFKGTSLAST 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 168 ITIMDLMGYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|148985284|ref|ZP_01818507.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147922482|gb|EDK73601.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
          Length = 226

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 48/214 (22%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 31  SFLLGLIVSII-----RHYRIPVLAQVATAYIELSRNTPLLIHLFFLYFGLPRIGIV--- 82

Query: 242 YQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                   V       F+GGS                   ++AE  RSGL A+ + Q E 
Sbjct: 83  ----LSSEVCATLGLVFLGGS-------------------YMAESFRSGLEAISQTQQEI 119

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN- 358
            +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 120 GLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGL 179

Query: 359 --QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
             +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 180 YYETDIALAMLVVAYLIMLLPISLVFSWIERRLR 213


>gi|330446187|ref|ZP_08309839.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490378|dbj|GAA04336.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 223

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 14/172 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFN-----FIGGSTVSPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF+     F+      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLIYY----GP--GQFDVTRESFLWDWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P+GQ +A  ALG+   K T   LLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFDAIPKGQWQACRALGM-ETKTTLSTLLPFAIRRAVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D++     I  QT   + +  I   +YL+++ ++++   RL  K AL
Sbjct: 167 TITIMDIMGYAQRINAQTYDTLTVFAIAGAMYLTVNAILSILF-RLVEKKAL 217


>gi|330810055|ref|YP_004354517.1| ABC transporter, permease component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327378163|gb|AEA69513.1| ABC transporter, permease component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 221

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 1/89 (1%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            +++L   ++   A ++AE  R GL AVP  QM AA +LG++  +A R++++PQ +R + 
Sbjct: 90  SWLALLAGITFNNAGYLAENFRGGLKAVPSTQMRAARSLGMSAFQAYRMIIVPQLLRIVF 149

Query: 325 PPLTSQYLNLLKNSSLAVAVGF-ADLVSV 352
            PLT+Q +  +  +SL V VG   DL  V
Sbjct: 150 YPLTNQMVWAVLMTSLGVVVGLNNDLTGV 178


>gi|161170238|gb|ABX59209.1| transport system permease protein BztC [uncultured marine group II
           euryarchaeote EF100_57A08]
          Length = 699

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 24/137 (17%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYI 271
           ++G  +  LY + +L   LP +V    K    FD  V  +  F   GG            
Sbjct: 525 RSGPLICWLYFAMYL---LPDVVEPTFKDPEDFDNIVRMMLIFGIFGG------------ 569

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
              CY    IAE++R GL +V  GQ EAAIALGL   +    + LP A+R+ +P + S +
Sbjct: 570 ---CY----IAEVIRGGLQSVDSGQREAAIALGLNPIQTKLQIELPNAIRTTLPSIVSVF 622

Query: 332 LNLLKNSSLAVAVGFAD 348
           + L K+++L   +   D
Sbjct: 623 IGLWKDTTLLFIINILD 639


>gi|91781145|ref|YP_556352.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693805|gb|ABE37002.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 281

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 55/99 (55%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F   G +   P+++ + + L+   +A IAE+ R  + ++P  Q EAA +L  +H +   
Sbjct: 137 EFTVFGATLPFPDWLKVTLGLALPASANIAEVFRGAVASIPTTQWEAASSLAFSHTQILW 196

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            V+LPQ +R ++PP  + Y  +   ++L+  VG  DL+ 
Sbjct: 197 HVVLPQCVRRMLPPWMNVYAIITMGTALSSLVGIHDLID 235


>gi|319946731|ref|ZP_08020965.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus australis ATCC 700641]
 gi|319746779|gb|EFV99038.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus australis ATCC 700641]
          Length = 226

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 40/177 (22%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+++S+      RH+           + +  +  PLL    FL FGLP +      
Sbjct: 31  SFLLGLIVSII-----RHYRIPILSQLAGCYIELSRNTPLLIQLFFLYFGLPRI------ 79

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                            G  +S E  +  I L     +++AE  RSGL AV + Q E  +
Sbjct: 80  -----------------GIVLSSEVCAT-IGLIFLGGSYMAESFRSGLEAVSQTQHEIGL 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           ++GLT R+  R V+LPQA    +P  ++  + L+K +S+   V  ADL+ V   +I 
Sbjct: 122 SIGLTPRQVFRYVILPQATAVALPSFSANVIFLIKETSVFSVVALADLMYVAKDLIG 178


>gi|59802320|ref|YP_209032.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|194099716|ref|YP_002002851.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999905|ref|ZP_04719829.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae 35/02]
 gi|240013148|ref|ZP_04720061.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae DGI18]
 gi|240015591|ref|ZP_04722131.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA6140]
 gi|240081801|ref|ZP_04726344.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA19]
 gi|240114080|ref|ZP_04728570.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae MS11]
 gi|240114681|ref|ZP_04728743.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID18]
 gi|240116883|ref|ZP_04730945.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID1]
 gi|240120219|ref|ZP_04733181.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID24-1]
 gi|240122517|ref|ZP_04735473.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID332]
 gi|240127227|ref|ZP_04739888.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae SK-93-1035]
 gi|260441512|ref|ZP_05795328.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae DGI2]
 gi|268595714|ref|ZP_06129881.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           35/02]
 gi|268597900|ref|ZP_06132067.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           FA19]
 gi|268600150|ref|ZP_06134317.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           MS11]
 gi|291044875|ref|ZP_06570584.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|293397953|ref|ZP_06642159.1| glutamine transport system permease [Neisseria gonorrhoeae F62]
 gi|59719215|gb|AAW90620.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|193935006|gb|ACF30830.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae NCCP11945]
 gi|268549103|gb|EEZ44521.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           35/02]
 gi|268551688|gb|EEZ46707.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           FA19]
 gi|268584281|gb|EEZ48957.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           MS11]
 gi|291011769|gb|EFE03765.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|291611899|gb|EFF40968.1| glutamine transport system permease [Neisseria gonorrhoeae F62]
 gi|317165200|gb|ADV08741.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 222

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 52/87 (59%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S +  A + ++VR  L ++ + Q+E+ +A GL+  +  R + LPQ++R ++P   + +  
Sbjct: 97  SLWGVAEMGDLVRGALESIEKHQVESGLAPGLSRGQVFRCIELPQSIRRVLPGAVNLFTR 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++K SSLA  +G  ++V VG  II  +
Sbjct: 157 MIKTSSLAWLIGVIEVVKVGQQIIENS 183


>gi|17548126|ref|NP_521528.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17430433|emb|CAD16906.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 223

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 25/190 (13%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------------LIFGLP 233
           +A+ F+   + G V+++  T LS       G AL L+ +S              +I GLP
Sbjct: 9   HAREFLPILLQGAVVTVEVTVLSFLLSSVIGLALALMRLSPIKAVSAAGATIVNIIRGLP 68

Query: 234 TLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V +   + ++F  P +G Q            F +  I L    +A+ AE  R+G+ AV
Sbjct: 69  IIVQL---FYIYFVLPDIGIQLT---------AFQAGVIGLGIAYSAYQAENFRAGIEAV 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   
Sbjct: 117 DPGQREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRA 176

Query: 353 GGTIINQTGQ 362
           G  I + T Q
Sbjct: 177 GQLIASSTFQ 186


>gi|313891398|ref|ZP_07825014.1| putative glutamine ABC transporter, permease protein GlnP
           [Dialister microaerophilus UPII 345-E]
 gi|313120173|gb|EFR43349.1| putative glutamine ABC transporter, permease protein GlnP
           [Dialister microaerophilus UPII 345-E]
          Length = 218

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 43/219 (19%)

Query: 185 TNAKIFVFSFVLGIVLSLFAT--RLSR--------HFHEKTGKALPLLYISTFLIFGLPT 234
           T  +I  F  VL ++  LF +  R  +         F+ +  +  PLL    FL FGLP 
Sbjct: 19  TTLRIAFFGIVLSLLFGLFISVIRYKKVPIISQICKFYIELSRNTPLLVQLFFLYFGLP- 77

Query: 235 LVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                 K  +H   +   L    F+G                   A+++AE  RSGL +V
Sbjct: 78  ------KAGIHISGENCALSGLVFLG-------------------ASYMAEAFRSGLESV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q+E+A ALG+   +  R +++PQA+   IP + +  + L+K +S+       DL+ V
Sbjct: 113 AKSQIESAAALGMGEYQIFRFIIIPQAVSVSIPSVCANIIFLIKETSVFSVCAIPDLMYV 172

Query: 353 GGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNR 387
              +I    +T + + +++I ++ I L +SI IA  + R
Sbjct: 173 AKDLIGLYYKTDETLFMLVISYLIILLPVSI-IAYLLER 210



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + T  +AF G++ + + G  +   R     +++ IC+ Y+E+ RN P LV +FFLY
Sbjct: 18  LTTLRIAFFGIVLSLLFGLFISVIRYKKVPIISQICKFYIELSRNTPLLVQLFFLY 73


>gi|308186172|ref|YP_003930303.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056682|gb|ADO08854.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 239

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 14/182 (7%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVL----GQFNFIG 258
           A +LS H      +A+  L     +IF G+P L++I   Y  +F    L    GQ     
Sbjct: 43  AAKLSPH------RAVRWLGEGYSVIFRGIPELLVI---YLFYFGGSGLITQIGQLFGAD 93

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   +P F+   +A+   + ++ AE+ R+  +A+ +G++EAA+A+G+   +  + +LLPQ
Sbjct: 94  GFIEAPPFLIGALAIGLISGSYQAEVYRAARLALAKGEIEAAVAIGMPRWRIRQRILLPQ 153

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             R  +P L++ +   LK+S+L    G  +L+         T       L+    YL L+
Sbjct: 154 VARYALPGLSNVWQMSLKDSALVSVTGIVELMRASQIAAGSTRDYFSFYLVGGACYLLLT 213

Query: 379 IM 380
           ++
Sbjct: 214 LL 215



 Score = 41.2 bits (95), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           F+ ++   ++G+ V A +LS ++ V W+   Y  +FR IP L+VI+  Y
Sbjct: 28  FAALLVGAVVGSGVAAAKLSPHRAVRWLGEGYSVIFRGIPELLVIYLFY 76


>gi|154687482|ref|YP_001422643.1| YtmM [Bacillus amyloliquefaciens FZB42]
 gi|154353333|gb|ABS75412.1| YtmM [Bacillus amyloliquefaciens FZB42]
          Length = 235

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI+RSG++AV  GQ EAA ++GLT  +  R V+LPQA    +P  T+ 
Sbjct: 106 MALSLTAGAYMTEILRSGIMAVDTGQAEAAYSIGLTRSQMIRRVVLPQAFMISLPNFTNI 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  L  +S+A  V   ++        +     +E  +    IY  L+++       L A
Sbjct: 166 GIGFLHTTSIAAIVAVPEITGTATIAASDNYAFLEAFIGAAVIYWGLTLI-------LEA 218

Query: 391 KIALKEKK 398
             +L EK+
Sbjct: 219 VNSLAEKR 226


>gi|323498049|ref|ZP_08103056.1| ABC transporter permease [Vibrio sinaloensis DSM 21326]
 gi|323316897|gb|EGA69901.1| ABC transporter permease [Vibrio sinaloensis DSM 21326]
          Length = 225

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G++EAA A G+++    R ++LP A+R  +P  +++ + +L  S++A  V   DL 
Sbjct: 116 GLPKGEVEAAKAYGMSNFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                + ++     E  L     Y++L+ +I
Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMALTFII 206


>gi|300689743|ref|YP_003750738.1| amino-acid ABC transporter [Ralstonia solanacearum PSI07]
 gi|299076803|emb|CBJ49413.1| putative amino-acid ABC transporter [Ralstonia solanacearum PSI07]
          Length = 223

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 32/189 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPT 234
           +T++     F+ S V+G+ L+L   RLS           P+  +S        +I GLP 
Sbjct: 23  VTVEVTVLSFLLSSVIGLALALM--RLS-----------PVKAVSAAGATIVNIIRGLPI 69

Query: 235 LVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           +V +   + ++F  P +G Q +          F +  I L    +A+ AE  R+G+ AV 
Sbjct: 70  IVQL---FYIYFVLPDIGIQLS---------AFQAGVIGLGIAYSAYQAENFRAGIEAVD 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   G
Sbjct: 118 PGQREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAG 177

Query: 354 GTIINQTGQ 362
             I + T Q
Sbjct: 178 QLIASSTFQ 186


>gi|302521614|ref|ZP_07273956.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|302430509|gb|EFL02325.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 213

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  + A ++ E  R+G+ AVP+GQ EAA AL L+  +    V+LPQA+R+++P L + 
Sbjct: 90  IVLGVHYATYMGEAYRAGIDAVPKGQWEAARALSLSPGRTWGAVVLPQAVRNVLPALGNY 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K +     +   D+V       +      E+  +   I+L  S   +L M +L  
Sbjct: 150 AIAMFKETPYLAVITVGDMVLHAREYGSAHFAHAEVFTLAGLIFLVASYPTSLLMRKLEK 209

Query: 391 KIA 393
           ++ 
Sbjct: 210 RLG 212


>gi|322386069|ref|ZP_08059708.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269913|gb|EFX52834.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 231

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 49  YRIPVLAQLATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLIFLGGSYMA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL AV + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 108 ESFRSGLEAVSQTQHEIGLAIGLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 167

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV  ADL+ V   +I    +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 168 AVALADLMYVAKDLIGLYYETDIALAMLVVAYLIMLLPISLLFSWIERRLR 218


>gi|297380137|gb|ADI35024.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Helicobacter pylori v225d]
          Length = 237

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++    +     +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 44  IVSFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFLQALKVATPSLSNTFISLFKETSLASVVTIAEIFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233


>gi|86360892|ref|YP_472779.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284994|gb|ABC94052.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 223

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I 
Sbjct: 89  ELTAANLAMVVNLGAYSCEIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  S++   +   DL      I ++T +A E  ++   IYL+L+I++
Sbjct: 149 PALSSQVVIVMLGSAVVSQIAAEDLTFAANFIQSRTFRAFEAYIVSTSIYLALAILL 205


>gi|156933098|ref|YP_001437015.1| hypothetical protein ESA_00908 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531352|gb|ABU76178.1| hypothetical protein ESA_00908 [Cronobacter sakazakii ATCC BAA-894]
          Length = 228

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 26/218 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLI- 238
           +T++      V S  +G+V +    +LSR+      + + L++ + T LI G+P LVL+ 
Sbjct: 15  VTLELALSAVVLSVAIGLVGA--GAKLSRN------RPMALIFEAYTTLIRGVPDLVLML 66

Query: 239 ----ALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                L+  L+     LG  QF+      + P    + I L     A+  E  R   +AV
Sbjct: 67  LIFYGLQIALNAITDALGFSQFD------IDPMIAGI-ITLGFIYGAYFTETFRGAYLAV 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G +EAA A G T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V  
Sbjct: 120 PKGHIEAATAFGFTGSQTFRRILFPSMMRYALPGIGNNWQVILKATALVSLLGLEDVVKA 179

Query: 353 GGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
                  T Q     ++   IYL   +LS  + L + R
Sbjct: 180 TQLAGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLER 217


>gi|90412873|ref|ZP_01220873.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium profundum 3TCK]
 gi|90326232|gb|EAS42659.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium profundum 3TCK]
          Length = 225

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 49/73 (67%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ +EI+R  + ++P+G++EAA A G++  +A R ++LP AMR  +P  +++ + ++ 
Sbjct: 102 TAAYTSEIIRGAINSLPKGEIEAAKAYGMSTPQAFRRIILPSAMRRALPAYSNEVIFMVH 161

Query: 337 NSSLAVAVGFADL 349
            S++A  V   DL
Sbjct: 162 GSAVAGIVTIVDL 174


>gi|307704542|ref|ZP_07641449.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           SK597]
 gi|307621907|gb|EFO00937.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           SK597]
          Length = 225

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  IFGTVMGIIMT---------SHSRIVRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|325062836|gb|ADY66526.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 247

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 255 NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           N +GG+  +P   F  +      + AAF AE +R G+ AVP   +EAA A+G T  +  R
Sbjct: 101 NALGGAQNNPLTPFFWVVAITGLHVAAFHAEALRGGIEAVPATTIEAARAIGFTSFEILR 160

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V  P A+R+ +P + +  +NL+K +++  A+   ++      I  Q    +E++L+ + 
Sbjct: 161 YVEFPLAIRTALPSIINNLINLVKLTTVGSAIAVGEITYASILIWTQRDNVVELMLVILI 220

Query: 373 IYLSLSIMIA 382
            +  ++ ++A
Sbjct: 221 FFSVINFIVA 230


>gi|309779095|ref|ZP_07673862.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Ralstonia sp. 5_7_47FAA]
 gi|308922160|gb|EFP67790.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Ralstonia sp. 5_7_47FAA]
          Length = 255

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 53/81 (65%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I + + +GL AV  GQ  AA+ALG++  +A   V+LPQA R ++P L +Q+++ +K++S
Sbjct: 113 YITQSMEAGLRAVGAGQRNAALALGMSPPQALLTVVLPQAWRIMLPSLANQWVSTVKDTS 172

Query: 340 LAVAVGFADLVSVGGTIINQT 360
           LA  VG  +L +    + ++T
Sbjct: 173 LAYIVGVVELSTAASQVNSRT 193


>gi|163792347|ref|ZP_02186324.1| ABC polar amino acid transporter, inner membrane subunit [alpha
           proteobacterium BAL199]
 gi|159182052|gb|EDP66561.1| ABC polar amino acid transporter, inner membrane subunit [alpha
           proteobacterium BAL199]
          Length = 221

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 54/85 (63%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FM++ IA    T ++  EI R+G+ ++ +GQ EAA + GLT  +    V++PQA+R+++P
Sbjct: 94  FMAVCIAFLLNTGSYYGEIYRAGIDSIGKGQWEAARSTGLTTTQTLVYVVIPQAVRNVLP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            L S  + ++K +S+A  V   +L+
Sbjct: 154 DLVSNTVEVVKLTSIASVVALPELL 178


>gi|148989074|ref|ZP_01820474.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147925571|gb|EDK76648.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
          Length = 225

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  MFGTVMGIIMT---------SHSRIIRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S+ I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SVIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|293391346|ref|ZP_06635680.1| histidine transport system permease protein HisQ [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951880|gb|EFE01999.1| histidine transport system permease protein HisQ [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 220

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 15/210 (7%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QLHFD 247
           V S VLG++L  LFA   +  F    GK + +      L+ GLP ++++ L Y       
Sbjct: 21  VCSLVLGLILGMLFAVLEANRF---VGKPMAVF---VALLRGLPEILVVLLVYFGSSEVV 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           + + G +   G       F     AL    AA+ ++ +R  + A+ +GQ E+  ALGL+ 
Sbjct: 75  EMITGDYIEFGA------FGCGVFALCLIFAAYASQTLRGAIQAIAKGQWESGAALGLSK 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
                 +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q     
Sbjct: 129 GYTFIHIVMPQVWRYALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTNTHQPFTWY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I   IYL ++++  + + +L  +    E+
Sbjct: 189 GIAALIYLLVTLVSQVGIRKLELRFTRFER 218


>gi|254302676|ref|ZP_04970034.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148322868|gb|EDK88118.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 226

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 17/168 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS + GI+  LF             K +  +Y+    I  +P LVL+ + Y        
Sbjct: 34  IFSIIFGILFGLFMV-----IKNPITKIISQIYLQAIRI--MPPLVLLFIAY-------- 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G    + G  +S E  S  I  + +  A + ++VR  + ++P+ Q+E+A AL L  ++ 
Sbjct: 79  FG-VTRMYGIHISAE-TSAIIVFTIWGTAEMGDLVRGAIESIPKSQIESATALALNKKQI 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              V++PQ +R +IP   +    ++K +SL V +G  +++ VG  II+
Sbjct: 137 YLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQIID 184


>gi|117619256|ref|YP_856222.1| histidine ABC transporter, permease protein HisQ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560663|gb|ABK37611.1| histidine ABC transporter, permease protein HisQ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 246

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 26/148 (17%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL----------GQFNFIGGSTVSPEFMSL---YIA 272
           T +I G+P LVL+ L   L F   VL             N++  S  + E++SL   YI 
Sbjct: 55  TTVIRGIPDLVLMML---LFFGGQVLINNLCTWVNESYNNYLLASNPNQEWVSLLPDYID 111

Query: 273 LSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +S + A          A++ E  R  ++AV +G++EAA A G+   +    +L PQ MR 
Sbjct: 112 ISPFAAGVATIGFIFGAYMTETFRGAILAVDKGELEAARAFGMRATQVFVRILFPQMMRH 171

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P   + +L LLK ++L   +G  D+V
Sbjct: 172 ALPGFGNNWLVLLKTTALVSIIGLDDMV 199


>gi|15965625|ref|NP_385978.1| amino acid ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307314029|ref|ZP_07593642.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307321206|ref|ZP_07600608.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15074806|emb|CAC46451.1| Hypothetical amino-acid ABC transporter permease [Sinorhizobium
           meliloti 1021]
 gi|306893108|gb|EFN23892.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306899151|gb|EFN29790.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 276

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI+R  + +VPRGQ E A ALGL  R A   V+LPQAM   + P  ++ + ++K
Sbjct: 156 TAAYQAEILRGAIESVPRGQREGAAALGLPERVAFFKVILPQAMIVALRPYGNEIILMIK 215

Query: 337 NSSLAVAVGFADLVS 351
            S++   V   DL+ 
Sbjct: 216 GSAIVAIVTVFDLMG 230



 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 57  LSLGIG-FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
           L+LG+G FL+   G++ ++        S Y  + L G   T  L  S ++   ++   V 
Sbjct: 36  LALGVGIFLTVVNGWDPEK-------FSRYGPSFLSGLGVTLTLVISSILMGAVLSLPVA 88

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
            GR+S N+L  W+   YV  FR  P +  +F +Y  + S    P    V  +  F +   
Sbjct: 89  LGRMSKNRLWGWLAYAYVYFFRGTPLITQLFLIYYGLGSFR--PQLETVGLWWFFRDAWN 146

Query: 176 LSFPTLTMDTNA 187
            +  T T++T A
Sbjct: 147 CALFTFTLNTAA 158


>gi|332093515|gb|EGI98573.1| histidine transport system permease protein hisQ [Shigella boydii
           3594-74]
          Length = 204

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+     +G    +G   + P    + I L     A+
Sbjct: 29  TTLIRGVPDLVLMLLIFFGLQIALNTVTEAMG----VGQIDIDPMVAGI-ITLGFIYGAY 83

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L
Sbjct: 84  FTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTAL 143

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
              +G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 144 VSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 193


>gi|323518735|gb|ADX93116.1| ABC-type arginine transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 214

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 79  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALP 138

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 139 GIGNNWQVLIKATALVSIIGLTDIVKI 165


>gi|225858525|ref|YP_002740035.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|225721060|gb|ACO16914.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
          Length = 225

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 57/105 (54%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  + + AA + ++VR  + ++P+ Q E+  ALGLT+ +    +++PQ +R ++P  
Sbjct: 94  SAIIVFTLWGAAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQA 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +    ++K +SL + +G  ++  VG  II+     I     W++
Sbjct: 154 INLVTRMIKTTSLVILIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|160899822|ref|YP_001565404.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160365406|gb|ABX37019.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 220

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 60/95 (63%), Gaps = 2/95 (2%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S+ +AL+   +AF A+ +R+G+  +   Q+EAA++LG+   +    V+LPQA+RS++ P+
Sbjct: 90  SVILALTLVCSAFTADYLRAGINTIAGSQIEAALSLGMRPMQIISAVVLPQALRSVVQPM 149

Query: 328 TSQYLNLLKNSSLAVAVGFA--DLVSVGGTIINQT 360
           TS  + L+ ++SLA  V  A  +L ++   I N +
Sbjct: 150 TSLLIALMLSTSLASQVPLAGRELTALVSKIANDS 184


>gi|225076168|ref|ZP_03719367.1| hypothetical protein NEIFLAOT_01200 [Neisseria flavescens
           NRL30031/H210]
 gi|224952511|gb|EEG33720.1| hypothetical protein NEIFLAOT_01200 [Neisseria flavescens
           NRL30031/H210]
          Length = 222

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 51/85 (60%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+ +ALGL+ R+    + LPQ++R  +P   + +  ++
Sbjct: 99  WGVAEMGDLVRGALESIEKHQVESGLALGLSRRQVFCYIELPQSVRRALPGAVNLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA  +G  ++V VG  II  +
Sbjct: 159 KTSSLASLIGVIEVVKVGQQIIENS 183


>gi|327394607|dbj|BAK12029.1| histidine transport system permease protein HisM [Pantoea ananatis
           AJ13355]
          Length = 238

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 107 LAFTLNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPVYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLN 389
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF  RL 
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF--RLA 224

Query: 390 AKIALKEKK 398
            +  L   K
Sbjct: 225 ERRWLAHVK 233


>gi|229593010|ref|YP_002875129.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229364876|emb|CAY52940.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 236

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 53/90 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI+R  L A+  GQ EA+  LGL+     R V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEIMRGALTAIAPGQREASQTLGLSRWTTLRKVILPQSLLVAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            + ++K SS+A  V   DL+ V     ++T
Sbjct: 171 LVLMIKASSIASLVTIYDLMGVTKLAFSRT 200


>gi|209516393|ref|ZP_03265249.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503155|gb|EEA03155.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 220

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 24/199 (12%)

Query: 182 TMDTNAKIFVFSFVLGI---VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           T+ T A       V+G    VL LF  R  R        A   +YI   L+ G P LV +
Sbjct: 23  TLGTWAAGVAIGLVIGFLIAVLQLFCGRWLR--------AALRVYIE--LLRGTPFLVQL 72

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              + L++  P +G        T+ P    + + L  Y +A+ AE  RSG  +VPRG +E
Sbjct: 73  ---FLLYYGGPSIGL-------TLEPMTAGI-VGLGLYGSAYFAEAFRSGFQSVPRGHLE 121

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA  LGLT  +A   +  PQ +  I+P LT+  + L K +++   V   +L  V   I +
Sbjct: 122 AASCLGLTRWQAIVRIQAPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGS 181

Query: 359 QTGQAIEIILIWMFIYLSL 377
            T   +E +L+    YL+L
Sbjct: 182 ATFAFVETLLVLCVCYLAL 200


>gi|318057583|ref|ZP_07976306.1| putative amino acid ABC transporter permease protein [Streptomyces
           sp. SA3_actG]
 gi|318076838|ref|ZP_07984170.1| putative amino acid ABC transporter permease protein [Streptomyces
           sp. SA3_actF]
          Length = 213

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  + A ++ E  R+G+ AVP+GQ EAA AL L+  +    V+LPQA+R+++P L + 
Sbjct: 90  IVLGVHYATYMGEAYRAGIDAVPKGQWEAARALSLSPGRTWGAVVLPQAVRNVLPALGNY 149

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K +     +   D+V       +      E+  +   I+L  S   +L M +L  
Sbjct: 150 AIAMFKETPYLAVITVGDMVLHAREYGSAHFAYAEVFTLAGLIFLVASYPTSLLMRKLEK 209

Query: 391 KIA 393
           ++ 
Sbjct: 210 RLG 212


>gi|308175098|ref|YP_003921803.1| L-cystine transport system permease TcyM [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607962|emb|CBI44333.1| L-cystine transport system permease protein TcyM [Bacillus
           amyloliquefaciens DSM 7]
          Length = 235

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++ EI+RSG++AV  GQ EAA ++GLT  +  R V+LPQA    +P  T+ 
Sbjct: 106 MALSLTAGAYMTEILRSGIMAVDTGQAEAAYSIGLTRGQMIRRVILPQAFMISLPNFTNI 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  L  +S+A  V   ++        +     +E  +    IY  L+++       L A
Sbjct: 166 GIGFLHTTSIAAIVAVPEITGTATIAASDNYAFLEAFIGAAVIYWGLTLI-------LEA 218

Query: 391 KIALKEKK 398
              L EK+
Sbjct: 219 VNTLAEKR 226


>gi|262043353|ref|ZP_06016481.1| histidine transport system permease HisQ [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259039305|gb|EEW40448.1| histidine transport system permease HisQ [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 235

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 10/155 (6%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+    VLG   F     + P    + I L     A+
Sbjct: 60  TTLIRGVPDLVLMLLIFYGLQIALNSVTDVLGMAQF----DIDPMIAGI-ITLGFIYGAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVP+G +EAA A G +  +  R +L P  MR  +P + + +  +LK ++L
Sbjct: 115 FTETFRGAYLAVPKGHIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATAL 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
              +G  D+V         T Q     ++   IYL
Sbjct: 175 VSLLGLEDVVKATQLAGKSTWQPFYFAIVCGLIYL 209



 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            ++  IL G + T  LA S ++ A +IG L GAG +LS+N+ +A +   Y  + R +P L
Sbjct: 11  GFSQVILQGALVTLELALSSVVLAVLIG-LAGAGAKLSSNRPLALVFEGYTTLIRGVPDL 69

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 70  VLMLLIF 76


>gi|121610315|ref|YP_998122.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554955|gb|ABM59104.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 217

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y ++F  P+LG           P F  + + L      F++E++R G ++V   Q+EA  
Sbjct: 71  YLVYFGLPMLG--------IDIPTFPCVVVVLVMQHTVFVSEVLRGGFLSVSISQIEAGR 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALG+      R+V  PQA  + +P L +  + L+ ++SL  AV   DL      I  +T 
Sbjct: 123 ALGMRPLAIFRIVQFPQAWSASVPALINALIILVHDTSLGAAVSLGDLTMAANVISQRTA 182

Query: 362 QAIEIILIWMFIYLSLS 378
            + E  L     Y +LS
Sbjct: 183 SSFEPFLAIAVCYSALS 199


>gi|322507367|gb|ADX02821.1| ABC-type arginine transport system, permease component
           [Acinetobacter baumannii 1656-2]
          Length = 214

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 79  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALP 138

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 139 GIGNNWQVLIKATALVSIIGLTDIVKI 165


>gi|206562620|ref|YP_002233383.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|198038660|emb|CAR54620.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
          Length = 229

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P
Sbjct: 94  FVAGVVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            + + +  L+K ++L   +G AD+V 
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVK 179


>gi|300716001|ref|YP_003740804.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299061837|emb|CAX58953.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 238

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 7/154 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           G+P L++I   Y  +F    L    GQ     G    P F+   +A+   +A++ AE+ R
Sbjct: 64  GIPELLII---YLFYFGGSGLITQIGQMFGADGFIEVPPFLIGALAIGLISASYQAEVFR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G +A+  G++EAA A+G+   +  + ++LPQ +R  +P L++ +   LK+S+L    G 
Sbjct: 121 AGRLALNSGEIEAAQAIGMPKWRILQRIILPQVVRYALPGLSNVWQMSLKDSALISVTGI 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            +L+         T Q     LI    YL L+++
Sbjct: 181 VELMRASQVAAGSTRQYFTFYLIGGTCYLLLTVL 214



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 27/46 (58%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           M+   ++G+ V A +LS  + V W+   Y  +FR IP L++I+  Y
Sbjct: 30  MMVGAVVGSGVAAAKLSPRRPVRWLGDGYSVIFRGIPELLIIYLFY 75


>gi|227822266|ref|YP_002826237.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
 gi|227341266|gb|ACP25484.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
          Length = 276

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI+R  + +VPRGQ E A ALGL  R A   V+LPQAM   + P  ++ + ++K
Sbjct: 156 TAAYQAEILRGAIESVPRGQHEGAAALGLPERIAFFKVILPQAMIVALRPYGNEIILMIK 215

Query: 337 NSSLAVAVGFADLVS 351
            S++   V   DL+ 
Sbjct: 216 GSAIVAIVTVFDLMG 230



 Score = 39.7 bits (91), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 10/132 (7%)

Query: 57  LSLGIG-FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
           L+ G+G FL+   G++ ++        S Y  + L G   T  L  S +    ++   V 
Sbjct: 36  LAFGVGIFLTIVDGWDPEK-------FSRYGPSFLSGLGVTLLLVISSIPMGAVLSFPVA 88

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
            GR+S N+  +WI  +YV  FR  P +  +F +Y  + S  P  + SI L +  F +   
Sbjct: 89  LGRMSKNRFWSWIAYIYVYFFRGTPLIAQLFLVYYGLGSFRPQLE-SIGL-WWFFRDAWN 146

Query: 176 LSFPTLTMDTNA 187
            +  T T++T A
Sbjct: 147 CALFTFTLNTAA 158


>gi|227499008|ref|ZP_03929145.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904457|gb|EEH90375.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 240

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 49/79 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +T A++ EI R+   AVP GQ EAA ++G+T  +A   V+ PQA+   +P   +Q
Sbjct: 110 VGLTLHTGAYLTEIFRAAYEAVPEGQKEAAKSIGMTGLQAFFRVIFPQAVTVALPMFANQ 169

Query: 331 YLNLLKNSSLAVAVGFADL 349
           +L+ +K++S+   +   +L
Sbjct: 170 FLSTMKSTSIVFVITVVEL 188


>gi|156973842|ref|YP_001444749.1| ABC transporter permease [Vibrio harveyi ATCC BAA-1116]
 gi|156525436|gb|ABU70522.1| hypothetical protein VIBHAR_01552 [Vibrio harveyi ATCC BAA-1116]
          Length = 225

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF+ +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFSPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  +   DL 
Sbjct: 116 GLPKGEVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                + ++     E  L     Y++L+ +I
Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMALTFII 206


>gi|239833798|ref|ZP_04682126.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821861|gb|EEQ93430.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 218

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 68/129 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L  + A + +++ R+ ++ V  GQ E A +LG    +  R +++PQA+R+ 
Sbjct: 86  PAVWTGVIGLGLHFAVYNSDLFRTAILTVDPGQNEGARSLGFGSGQTLRYIIVPQAVRNA 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P + +  + LLK+++L   +G  +LV      I++T    E  +    I+  L++++  
Sbjct: 146 LPQVGNNLIALLKDTALVSVIGITELVHASQQAISETYSPFEFYITAAVIFYVLNLILEA 205

Query: 384 FMNRLNAKI 392
            ++ +  K+
Sbjct: 206 GLHWMEKKV 214


>gi|271501284|ref|YP_003334309.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344839|gb|ACZ77604.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 229

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  E  R   +AVPRGQ+EAA+A G T  K  R ++ P  MR  +P + + +  +LK 
Sbjct: 105 GAYFTETFRGAYLAVPRGQIEAAVAFGFTPMKVFRRIMFPSMMRFALPGIGNNWQVILKA 164

Query: 338 SSLAVAVGFADLVS 351
           ++L   +G +D++ 
Sbjct: 165 TALVSLLGLSDVIK 178


>gi|186473936|ref|YP_001861278.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196268|gb|ACC74232.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 567

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  I  +   AAF AE+ R+G+++V R Q  AA ALG+      R ++LPQ+MR++I
Sbjct: 123 EVTTAVIGFALNEAAFSAELFRAGILSVNRSQSTAAAALGMGPLLTLRRIVLPQSMRAVI 182

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +  + +LK +S+A  +   +L      ++ Q  +   +      IYL L+  ++L 
Sbjct: 183 PGLANDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFGAAAVIYLILTSGVSLL 242

Query: 385 M 385
            
Sbjct: 243 Q 243


>gi|172063854|ref|YP_001811505.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171996371|gb|ACB67289.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 231

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 13/173 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYT 277
           L++S F   G P LV I   + L++    L QF+ +  S     V   F     AL+   
Sbjct: 57  LFMSVFR--GTPLLVQI---FVLYYG---LAQFSIVRASPLWLLVGGSFSCALCALTLNL 108

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AE +R G+  VP G+ EAA+A G++    T  V++P+A+  + P L ++ +  LK+
Sbjct: 109 AAYMAEDIRGGIAGVPVGEKEAALAFGMSRFMLTWFVIVPRAIGIVAPTLGNEIVLQLKS 168

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++LA  +   DL  V   I  +T    + +++   +Y+ ++ +++  + R+  
Sbjct: 169 TALASTITVLDLTGVARRISIET-YTTDALMLAGIVYVGITAVLSTALKRVEG 220


>gi|120556217|ref|YP_960568.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinobacter aquaeolei VT8]
 gi|120326066|gb|ABM20381.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Marinobacter aquaeolei VT8]
          Length = 240

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 2/176 (1%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +++ T+L  G P L+ + + Y      P + Q  F       P + +L +A +  TAA+ 
Sbjct: 63  IWLYTYLFRGTPLLIQLYIIYYGVAQIPGI-QDTFWWEIFKEPLYPAL-LAFTLNTAAYT 120

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+R  +I+ P G++EAA A G+      R ++LP A R  +   +++ + +L  S++A
Sbjct: 121 TEIIRGAIISTPNGEIEAAKAYGMNWFLRMRRIILPSAARRAVQAYSNEVIFMLHASAIA 180

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             V   DL      I ++     E  +     Y++L+ ++     +L   +   ++
Sbjct: 181 SVVTIVDLTGAARNIYSRFYAPFEAFIFVALCYMALTFILVFVFRKLENHLLRHQR 236


>gi|172062639|ref|YP_001810290.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171995156|gb|ACB66074.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 229

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L     A+  E  R   +AVPRGQ+EA  A G+   +    +L PQ MR  +P
Sbjct: 94  FVAGVITLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMGGWRVFHRILFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            + + +  L+K ++L   +G AD+V 
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVK 179


>gi|331683979|ref|ZP_08384575.1| histidine transport system permease protein HisQ [Escherichia coli
           H299]
 gi|331078931|gb|EGI50133.1| histidine transport system permease protein HisQ [Escherichia coli
           H299]
          Length = 228

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D++ 
Sbjct: 172 GLEDVLK 178



 Score = 39.7 bits (91), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|271501472|ref|YP_003334498.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345027|gb|ACZ77792.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 240

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 13/147 (8%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP----VLGQFNFIGGSTVS 263
           +R F    G+   +++       G+P L++I   Y  +F        +G++    G    
Sbjct: 48  TRRFWRVAGETYSIVFR------GIPELLII---YLFYFGGSGVLTQIGRWFGAEGFIEL 98

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   +A+   +A++  E+ R+  +AV  G++EAA A+G++H +    +LLPQ MR  
Sbjct: 99  PPFLIGALAIGLISASYQGEVYRAARLAVSSGELEAASAMGMSHWRIGWRILLPQVMRFA 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +P L++ +   LK+S+L    G  +L+
Sbjct: 159 LPGLSNVWQMSLKDSALVSVTGIIELM 185


>gi|89073557|ref|ZP_01160079.1| ABC-type arginine/histidine transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89050584|gb|EAR56070.1| ABC-type arginine/histidine transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 223

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 14/172 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF  I  S V      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLIYY----GP--GQFEGIRESFVWQWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P+GQ +A  ALG+   K T   LLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFDAIPKGQWQACRALGM-ETKTTLRTLLPFAIRRSVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D++     I  QT   + +  I   +YL+++ ++++   RL  K AL
Sbjct: 167 TITIMDIMGYAQRINAQTYDTLTVFAIAGAMYLTVNALLSIVF-RLIEKKAL 217


>gi|322376965|ref|ZP_08051458.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282772|gb|EFX59779.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 225

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  IFGTVMGIIMT---------SHSRIVRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNIQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|308062254|gb|ADO04142.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           Cuz20]
 gi|317177726|dbj|BAJ55515.1| amino acid ABC transporter permease [Helicobacter pylori F16]
          Length = 240

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++    +     +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 47  IISFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 101

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 102 GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 154 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 213

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 214 YLEAALIYWLFCLVLEVIQKRVE 236


>gi|165873651|gb|ABY67951.1| phosphate-solubilizing protein [Burkholderia cepacia]
          Length = 140

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R   ++VPRGQ+EA  A G+T  +    ++ PQ MR  +P
Sbjct: 18  FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTSWQVFTRIMFPQMMRFALP 77

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            + + +  L+K+++L   +G AD+V
Sbjct: 78  GIGNNWQVLVKSTALVSIIGLADVV 102


>gi|154508314|ref|ZP_02043956.1| hypothetical protein ACTODO_00811 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797948|gb|EDN80368.1| hypothetical protein ACTODO_00811 [Actinomyces odontolyticus ATCC
           17982]
          Length = 290

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 17/154 (11%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV++   Y + F  P L        +T  P      +AL    ++++AE++R+GL 
Sbjct: 129 GVPFLVVL---YLIGFGIPALNP------TTRIPTAFLGTVALILTYSSYVAEVLRAGLD 179

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V   Q  AA +LGL+H +  R++++PQA+R + P L + ++++ K+  L   +G  D +
Sbjct: 180 SVHPSQRYAARSLGLSHGQTLRMIIVPQAIRKVTPALMNDFISMQKDVGLISVLGAVDAI 239

Query: 351 S----VGGTIINQTGQAIE----IILIWMFIYLS 376
                V     N T   +     IIL + FI LS
Sbjct: 240 RSAQMVQAKTYNMTSYVVAGLLFIILSFPFIRLS 273


>gi|148826213|ref|YP_001290966.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           PittEE]
 gi|229846208|ref|ZP_04466320.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           7P49H1]
 gi|148716373|gb|ABQ98583.1| arginine transport system permease protein [Haemophilus influenzae
           PittEE]
 gi|229811212|gb|EEP46929.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           7P49H1]
          Length = 227

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 14/206 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   L+LF T L    ++   +A+ L Y++ F   G P LV    ++ L +  P  GQF 
Sbjct: 26  IAFCLALFLTFLLSMENKWIKRAVNL-YLTLFT--GTPLLV----QFFLIYAGP--GQFQ 76

Query: 256 FIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           +I  S++    S  +    +AL+  +AA+  ++    + A+P+GQ E+  ALGL+ R  T
Sbjct: 77  WIIDSSLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVKAIPKGQWESCAALGLS-RLQT 135

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             +L+P A++  +P  +++ + + K ++LA  +   D++     +      AI I  I  
Sbjct: 136 LKILIPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAG 195

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            IYL ++ +  L + +L  K+   E+
Sbjct: 196 GIYLIITGIATLLLRKLEKKVLAFER 221


>gi|270159601|ref|ZP_06188257.1| amino acid ABC transporter permease protein [Legionella longbeachae
           D-4968]
 gi|289165608|ref|YP_003455746.1| transporter subunit: permease component of ABC superfamily
           transporter [Legionella longbeachae NSW150]
 gi|269987940|gb|EEZ94195.1| amino acid ABC transporter permease protein [Legionella longbeachae
           D-4968]
 gi|288858781|emb|CBJ12686.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Legionella longbeachae NSW150]
          Length = 212

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 70/128 (54%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+  I     ++A+IAEI+R+G+  +P+GQ EAA  L + +    + ++LPQ +++++P 
Sbjct: 84  MAGLITFGLNSSAYIAEILRAGIEHLPKGQFEAAKTLHIPNFYLWKDIVLPQVIKNVLPA 143

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             ++ + LLK ++L   +G  DL+    ++  +       + I  F Y +L ++I     
Sbjct: 144 FINEMIALLKETALIATIGGMDLMRRAQSVAAEQFTYFLPLCIAGFYYYALVLLIETLGK 203

Query: 387 RLNAKIAL 394
           ++  + AL
Sbjct: 204 KIEQRGAL 211


>gi|254508524|ref|ZP_05120642.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219548549|gb|EED25556.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 246

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 1/91 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV +G++EA  A G++   + R +LLPQ +R
Sbjct: 112 VSP-FIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAGKAYGMSPIMSFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             +P   + +L LLK ++L   +G  D+V V
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRV 201


>gi|29653827|ref|NP_819519.1| arginine transport system permease protein [Coxiella burnetii RSA
           493]
 gi|29541090|gb|AAO90033.1| arginine transport system permease protein [Coxiella burnetii RSA
           493]
          Length = 223

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 11/204 (5%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKY----QLHFDKPVL 251
            +VL LF   L   F E     L   + +  F+I G P LV I + Y    Q H+ +   
Sbjct: 24  ALVLGLFLAALLTVFSESGFSFLEAPVNVFVFIIRGTPLLVQIFIIYYGSGQFHWLRET- 82

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                I  S +   F    IAL+  T+A+   ++R  + ++P G++EAA ALGL+  KA 
Sbjct: 83  -----ILWSVLKRPFGCAIIALAINTSAYTTVLLRGAIRSIPTGEIEAAKALGLSRWKAY 137

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           + +++P+A+R ++P  +++ + +LK +SLA  +   D++ V   +I  T + I +  +  
Sbjct: 138 QRIIIPRAIRIVLPAYSNEVIMILKGTSLAGTITLMDIMGVTRHLIAMTYEVIPLFFLAG 197

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
            IY  L+ +I      L  K+  +
Sbjct: 198 IIYFVLNALIMSVFYFLEKKLTFQ 221


>gi|240947950|ref|ZP_04752377.1| arginine transporter permease subunit ArtM [Actinobacillus minor
           NM305]
 gi|257465092|ref|ZP_05629463.1| arginine transporter permease subunit ArtM [Actinobacillus minor
           202]
 gi|240297744|gb|EER48203.1| arginine transporter permease subunit ArtM [Actinobacillus minor
           NM305]
 gi|257450752|gb|EEV24795.1| arginine transporter permease subunit ArtM [Actinobacillus minor
           202]
          Length = 224

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 14/226 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LSF    + T+  +   S V+  V+++F T L      K  K     Y+  F   G P L
Sbjct: 5   LSFIAQGIPTSLGLMATSLVIAFVIAVFFTFL-LSMENKIVKGFVNGYLMLFT--GTPLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           V    ++ L +  P  GQF ++  S +    S  +    +AL+  +AA+  ++    + A
Sbjct: 62  V----QFFLIYSGP--GQFQWLIDSPLWILFSDAWFCAVLALALNSAAYSTQLFHGAVKA 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ E   ALGL+ R  T  +L+P A++  +P  +++ + + K +SLA  +   D++ 
Sbjct: 116 IPKGQWETCAALGLS-RLDTLKILIPYALKRALPSYSNEIILVFKGTSLASTITILDIMG 174

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               +      AI I  +   IYL ++ ++ + + +L  K+   E+
Sbjct: 175 YARQLYGTEYDAIGIYSMAGLIYLVITGIMTILLRKLEHKVLAFER 220


>gi|238898834|ref|YP_002924516.1| arginine transport protein (ABC superfamily, membrane) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466594|gb|ACQ68368.1| arginine transport protein (ABC superfamily, membrane) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 236

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 8/168 (4%)

Query: 217 KALPLLYISTFLIFGLPTL-VLIALKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + I  F+ FG   L +L+   + ++F   + P+    NF+    +SP F+   IA
Sbjct: 55  RGLPEILIVFFIYFGSSELFILLTDGFTINFYLFELPIKCHSNFL---EISP-FLCAVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   +A+ A+I R    A+  GQ E+  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LALLYSAYAAQIFRGAFKAISFGQRESGQALGLSSFFIFIRLIMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            LLK+++L   +   D++     I  +T +      I   IYL ++++
Sbjct: 171 ILLKDTALVSLISVNDVMLQAKNIAVRTQEPFTWYFIAALIYLVITLI 218


>gi|83746154|ref|ZP_00943208.1| Hypothetical Protein RRSL_04190 [Ralstonia solanacearum UW551]
 gi|207722043|ref|YP_002252481.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207741843|ref|YP_002258235.1| amino-acid transmembrane abc transporter protein [Ralstonia
           solanacearum IPO1609]
 gi|83727120|gb|EAP74244.1| Hypothetical Protein RRSL_04190 [Ralstonia solanacearum UW551]
 gi|206587217|emb|CAQ17801.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206593227|emb|CAQ60154.1| amino-acid transmembrane abc transporter protein [Ralstonia
           solanacearum IPO1609]
          Length = 223

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 25/190 (13%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------------LIFGLP 233
           +A+ F+   + G V+++  T LS       G AL L+ +S              +I GLP
Sbjct: 9   HAREFLPILLQGAVVTVEVTVLSFLLSSVIGLALALMRLSPVKAVSAAGATVVNIIRGLP 68

Query: 234 TLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V +   + ++F  P +G Q            F +  I L    +A+ AE  R+G+ AV
Sbjct: 69  IIVQL---FYIYFVLPDIGIQLT---------AFQAGVIGLGIAYSAYQAENFRAGIEAV 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   
Sbjct: 117 DPGQREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRA 176

Query: 353 GGTIINQTGQ 362
           G  I + T Q
Sbjct: 177 GQLIASSTFQ 186


>gi|89514203|gb|ABD74962.1| ABC transporter [Sinorhizobium kostiense]
          Length = 176

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 64/107 (59%), Gaps = 1/107 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++SP +++  IA+  + AA+++E+ R G+ +VP+GQ EA  A+ LT  +  R ++LPQ
Sbjct: 48  GVSLSP-WVAGMIAIGLHYAAYLSEVYRGGIESVPKGQWEACTAINLTTAQTYRRIILPQ 106

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           A+   +  + +  +++ K++ +   +G A+L+     I  Q  + +E
Sbjct: 107 ALPLSVAGMGNYPISIFKDTPMLSVIGVAELMQAATAIGGQNYRYLE 153


>gi|126740301|ref|ZP_01755990.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126718756|gb|EBA15469.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 248

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 7/159 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG+V+ LF     + +  K  +   LL I T +I  +P LVLI + Y +  D  ++ 
Sbjct: 40  AFGLGLVIGLFGA-YGKLYGGKVTR--DLLAIYTTVIRAVPELVLILILYYVGSD--IIN 94

Query: 253 QFN-FIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           Q +  +GG  V    ++  I  L     A+  E++R  + AVP GQ+EAA + G+     
Sbjct: 95  QISEAMGGGRVEINGVAAGIWVLGVVQGAYATEVLRGAIQAVPTGQIEAAKSYGMPAIMI 154

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            R V +P  M   +P L + +L   K+++L   VGF +L
Sbjct: 155 MRRVTIPAMMSFAVPGLANLWLIATKDTALLAVVGFNEL 193


>gi|188533325|ref|YP_001907122.1| Histidine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028367|emb|CAO96228.1| Histidine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 238

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  E+    + AVP G++EAA A G +  K  R +++P A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEVFAGAIRAVPHGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      DL+ V   I + T Q      I   +YL +S  +I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKVARDINSATYQPFIAFGIAAVLYLIISYALISLF 221


>gi|293193927|ref|ZP_06609887.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinomyces odontolyticus F0309]
 gi|292819821|gb|EFF78828.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinomyces odontolyticus F0309]
          Length = 290

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 17/154 (11%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV++   Y + F  P L        +T  P      +AL    ++++AE++R+GL 
Sbjct: 129 GVPFLVVL---YLIGFGIPALNP------TTRIPTAFLGTVALILTYSSYVAEVLRAGLD 179

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V   Q  AA +LGL+H +  R++++PQA+R + P L + ++++ K+  L   +G  D +
Sbjct: 180 SVHPSQRYAARSLGLSHGQTLRMIIVPQAIRKVTPALMNDFISMQKDVGLISVLGAVDAI 239

Query: 351 S----VGGTIINQTGQAIE----IILIWMFIYLS 376
                V     N T   +     IIL + FI LS
Sbjct: 240 RSAQMVQAKTYNMTSYVVAGLLFIILSFPFIRLS 273


>gi|293392695|ref|ZP_06637014.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           subunit [Serratia odorifera DSM 4582]
 gi|291424812|gb|EFE98022.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           subunit [Serratia odorifera DSM 4582]
          Length = 221

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP+L      ++L   +  L               +++ I L  Y+     EI+R
Sbjct: 75  FIVFGLPSL-----GWKLTAGQAAL---------------LAMVINLGAYST----EIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+   P+GQ EA   LG +  +    ++LP +++ I P L SQ + ++  SS+   V F
Sbjct: 111 AGIQVTPKGQWEAGRVLGFSRSQTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSF 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++T  + E+ L+    YL LS+++
Sbjct: 171 EELTFAANLIQSRTFLSFEVYLVTTLFYLLLSVLM 205


>gi|323154489|gb|EFZ40690.1| general L-amino acid transport system permease aapQ domain protein
           [Escherichia coli EPECa14]
          Length = 130

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 55/106 (51%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEI 130


>gi|163747860|ref|ZP_02155196.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45]
 gi|161378861|gb|EDQ03294.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45]
          Length = 224

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 12/132 (9%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           +L+IS F   G P LV + L Y   F  P VL     I G T +       + L+ + +A
Sbjct: 57  VLFISFFR--GTPLLVQLFLFY---FGLPQVLSFLTQIDGVTAA------IMGLTLHFSA 105

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R+ ++ V R Q EAA ++G+T  +    ++LPQA R   P L + +++++K +S
Sbjct: 106 YMAESIRAAIMGVDRSQWEAAQSIGMTQGQLMWRIILPQAARIAAPTLVNYFIDMIKGTS 165

Query: 340 LAVAVGFADLVS 351
           LA  +G  +++ 
Sbjct: 166 LAFTLGVTEMMG 177


>gi|218460117|ref|ZP_03500208.1| putative permease component of ABC transporter [Rhizobium etli Kim
           5]
          Length = 171

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 42/66 (63%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    AA+ +E +RSG+ +V  GQM+AA ALG  +  A R V++PQ  R+ +PPL + 
Sbjct: 106 IGLGLCQAAYFSEDLRSGVRSVSDGQMQAARALGHGYVSAMRFVIMPQGARNALPPLINH 165

Query: 331 YLNLLK 336
            ++L K
Sbjct: 166 SVSLFK 171


>gi|325062523|gb|ADY66213.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 223

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I 
Sbjct: 89  ELTAANLAMIVNLGAYSCEIIRAGIQATPKGQFEAGASLAMTRFETFRHVVLTPSLQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  S++   +   DL      I ++T +A E  ++   IYL L+I++
Sbjct: 149 PALSSQVVIVMLGSAVVSQIAVEDLTFAANFIQSRTFRAFEAYILSTVIYLLLAILL 205


>gi|291530248|emb|CBK95833.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Eubacterium siraeum 70/3]
          Length = 219

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 38/211 (18%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +FS ++G+V ++         R     + +  +  PLL    F+ +GLP       K  +
Sbjct: 29  IFSIIIGLVCAVVQYYKVPVIRRIVSVYIEISRNTPLLVQLFFIYYGLP-------KVGI 81

Query: 245 HFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
             D    G     F+GGS                   ++AE  RSGL +V + Q E+A +
Sbjct: 82  PTDAETCGIAGLAFLGGS-------------------YMAEAFRSGLESVDKIQTESAYS 122

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQ 359
           LG+   +A R V+LPQAM   IP   +  + L+K +S+  A+   DL+ +   ++   N 
Sbjct: 123 LGMNKMQAMRYVILPQAMSVSIPAFVANVIFLMKETSVFSAISLLDLMFMAKDLMGMYND 182

Query: 360 TGQAIEIIL-IWMFIYLSLSIMIALFMNRLN 389
           T +A+ +++  ++ I L +SI+  +   R+ 
Sbjct: 183 TTEALCLLVGFYLIILLPISIVGTIVERRVR 213


>gi|254501614|ref|ZP_05113765.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222437685|gb|EEE44364.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 271

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 61/123 (49%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           + AL    AA+  E++R     VPRG++EAA A G+      R + LP+A    +P L+ 
Sbjct: 144 FTALMLSFAAYEGEVMRGAFAGVPRGELEAARAFGMNRFTMFRRIWLPRAFYRALPTLSG 203

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +  LK++ L   +   D  +V   +   T    E +L+   IY+ L+ ++ L    L 
Sbjct: 204 ETVLQLKSTPLVATITVVDAYAVITRVRQDTFLVYEPLLLLALIYMCLTGILVLLFRYLE 263

Query: 390 AKI 392
           ++I
Sbjct: 264 SRI 266


>gi|210611520|ref|ZP_03288940.1| hypothetical protein CLONEX_01130 [Clostridium nexile DSM 1787]
 gi|319936517|ref|ZP_08010932.1| hypothetical protein HMPREF9488_01765 [Coprobacillus sp. 29_1]
 gi|210151967|gb|EEA82974.1| hypothetical protein CLONEX_01130 [Clostridium nexile DSM 1787]
 gi|319808409|gb|EFW04964.1| hypothetical protein HMPREF9488_01765 [Coprobacillus sp. 29_1]
          Length = 224

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +  E  S+ I  S +  A +A++VR  LI++P+ Q E+A ALG++  +    +++PQ
Sbjct: 86  GIDIEAEKASI-IVFSFWGTAEMADLVRGALISIPKHQYESAKALGMSELQIYLHIVMPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +R +IP   +    ++K +SL + +G  +++ VG  II 
Sbjct: 145 TLRRLIPLSMNLITRMIKTTSLIMMIGVVEVLKVGQQIIE 184


>gi|332040046|gb|EGI76431.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 213

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 1/114 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T+AF AE+ RS      R Q+EAA+A G+T  +A R ++LPQ   + +P L ++
Sbjct: 87  LALTINTSAFNAEVWRSAFRGFSREQLEAALACGMTRLQAFRRIMLPQMAVTSMPGLINE 146

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL-SIMIAL 383
              L+K S     +G  DL  V   I   T + +  IL    +Y++L ++M+ L
Sbjct: 147 MTFLVKGSPAIAVIGMVDLTRVTNRIAAVTYEPLPPILAAAVLYMALIALMVKL 200


>gi|322386068|ref|ZP_08059707.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269912|gb|EFX52833.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 189

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L   Y+    I  +P LVL+ + Y       +
Sbjct: 2   IFGTVMGIIMTS---------HSRVVRFLTRFYLEFIRI--MPQLVLLFIVY-----FGL 45

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 46  ARNFNINISGET------SAVIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNFQ 99

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 100 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 159

Query: 370 WMF 372
           W++
Sbjct: 160 WIY 162


>gi|317009597|gb|ADU80177.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           India7]
          Length = 237

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLG----IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           V SF+LG    ++++L      +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 44  VVSFILGLFIAVMVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233


>gi|222148130|ref|YP_002549087.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735118|gb|ACM36081.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 223

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 63/115 (54%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  EI+R+G+ A P+GQ EA  AL L   +  RL++L  A++ I P L+SQ + ++  
Sbjct: 102 GAYSCEIIRAGIEATPKGQFEAGTALALRPLQTFRLIILVPALQRIWPALSSQLVIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S++   +   DL      I ++T +A E  +I   +YL L+I +   +  L  +I
Sbjct: 162 SAVVSQIATEDLTFAANFIQSRTFRAFEAYMISTALYLLLAIGLRQLLALLGRQI 216


>gi|190892982|ref|YP_001979524.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190698261|gb|ACE92346.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 235

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP   ++ + LS Y   +++E++R   +AV RGQ +AA +LG T R+    VL PQA+ 
Sbjct: 86  VSPNIAAM-LGLSLYHGGYLSEVMRPAYLAVERGQHDAADSLGYTFRQKLLRVLAPQAVH 144

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             +P   +  + L+ N +L + +G AD+++    ++ +
Sbjct: 145 IALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMER 182


>gi|157161794|ref|YP_001459112.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           HS]
 gi|157067474|gb|ABV06729.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           HS]
          Length = 238

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIACDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|326382187|ref|ZP_08203879.1| ABC amino acid transporter, permease component [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198917|gb|EGD56099.1| ABC amino acid transporter, permease component [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 214

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 264 PEFMSLYIA---LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           P+F  L I    L  + A+++AE+ R+G+  VP GQ EAA AL L   +  R V+LPQ  
Sbjct: 80  PQFTPLTIGIAVLGVHYASYMAEVYRAGIEEVPVGQWEAARALSLPGTRTWRAVILPQVA 139

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           R+ +P L +  +++ K++     +   +LV+   T
Sbjct: 140 RNSLPALGNNAVSMFKDTPYLFTISVVELVTAAQT 174


>gi|300702420|ref|YP_003744020.1| amino-acid ABC transporter [Ralstonia solanacearum CFBP2957]
 gi|299070081|emb|CBJ41368.1| putative amino-acid ABC transporter [Ralstonia solanacearum
           CFBP2957]
          Length = 223

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 25/190 (13%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------------LIFGLP 233
           +A+ F+   + G V+++  T LS       G AL L+ +S              +I GLP
Sbjct: 9   HAREFLPILLQGAVVTVEVTVLSFLLSSVIGLALALMRLSPVKAVSAAGATVANIIRGLP 68

Query: 234 TLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V +   + ++F  P +G Q            F +  I L    +A+ AE  R+G+ AV
Sbjct: 69  IIVQL---FYIYFVLPDIGIQLT---------AFQAGVIGLGIAYSAYQAENFRAGIEAV 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   
Sbjct: 117 DPGQREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRA 176

Query: 353 GGTIINQTGQ 362
           G  I + T Q
Sbjct: 177 GQLIASSTFQ 186


>gi|296156899|ref|ZP_06839736.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295892785|gb|EFG72566.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 567

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 64/121 (52%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  I  +   AAF AE+ R+G+++V R Q  AA ALG+      R ++LPQ+MR++I
Sbjct: 123 EVTTAVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLRRIILPQSMRAVI 182

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +  + +LK +S+A  +   +L      ++ Q  +   +      IYL L+  I+L 
Sbjct: 183 PGLANDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFGAAAVIYLFLTSGISLL 242

Query: 385 M 385
            
Sbjct: 243 Q 243


>gi|91779493|ref|YP_554701.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692153|gb|ABE35351.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 567

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 64/121 (52%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  I  +   AAF AE+ R+G+++V R Q  AA ALG+      R ++LPQ+MR++I
Sbjct: 123 EVTTAVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLRRIILPQSMRAVI 182

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +  + +LK +S+A  +   +L      ++ Q  +   +      IYL L+  I+L 
Sbjct: 183 PGLANDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFGAAAVIYLFLTSGISLL 242

Query: 385 M 385
            
Sbjct: 243 Q 243


>gi|317507275|ref|ZP_07965019.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Segniliparus
           rugosus ATCC BAA-974]
 gi|316254426|gb|EFV13752.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Segniliparus
           rugosus ATCC BAA-974]
          Length = 291

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 21/134 (15%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP+L +   L FG P L L  L  +  F           G +           AL   
Sbjct: 128 RGLPVLLVIFLLGFGAPALRLKGLPKEALF----------WGAA-----------ALVLT 166

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+ R+G+ +VP+ Q  AA ALGL      R V+LPQA+R++ P L +  ++L K
Sbjct: 167 YSAYVAEVFRAGVESVPQTQRLAARALGLRGGATMRFVVLPQAIRAVAPALLNDLVSLQK 226

Query: 337 NSSLAVAVGFADLV 350
           +S L   +G  D +
Sbjct: 227 DSGLIAVLGVVDAI 240


>gi|121607189|ref|YP_994996.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121551829|gb|ABM55978.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 216

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 11/164 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G+P +VL+   + ++F  P  G    +  + +    + L IA S Y A    E  R+
Sbjct: 61  LLRGIPIIVLL---FFIYFVMPDFG----VSLTALQAGILGLGIAYSAYQA----ENFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV +GQ+EAA A+G++     R VLLPQA R  +P   +  + +LK+SS A  +   
Sbjct: 110 GIEAVDQGQVEAAQAMGMSWWLTMRRVLLPQAFRITLPSYGNIMIMMLKDSSQASTITVT 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   G  I   T Q   +  +   +YL + + + L +     +
Sbjct: 170 ELALQGKLIATSTFQNATVFSLVALLYLIMCVPLILLVRHFEKR 213


>gi|119025522|ref|YP_909367.1| permease of ABC transporter system for amino acids [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154486960|ref|ZP_02028367.1| hypothetical protein BIFADO_00797 [Bifidobacterium adolescentis
           L2-32]
 gi|118765106|dbj|BAF39285.1| permease of ABC transporter system for amino acids [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154084823|gb|EDN83868.1| hypothetical protein BIFADO_00797 [Bifidobacterium adolescentis
           L2-32]
          Length = 224

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 51/83 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P+ Q E++  LGL+  +    V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALESIPKAQYESSYVLGLSGWQTFTKVILPQALRRLLPASVNLATRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|254503514|ref|ZP_05115665.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222439585|gb|EEE46264.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 242

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAA 279
           LL + T +I  +P LVLI L Y    D  V      +G   V    ++  I  +     A
Sbjct: 63  LLEVYTTVIRAVPELVLILLLYYAGTDT-VNALLGLVGLPRVDISGLAAGIFVIGVVQGA 121

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E++R  + AVP GQ+EAA A G++  K  R + LP  +   IP L++ +L   K+++
Sbjct: 122 YQTEVLRGAIKAVPPGQIEAARAYGMSPLKTLRRITLPAMLPYAIPGLSNLWLIATKDTA 181

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM---IALFMNRLNAKIALKE 396
           L   VGF++L  V       T QA      +M  + +  +M   + L  NR+   IA+ E
Sbjct: 182 LLAVVGFSELTLV-------TRQAAGSTKAYMLFFCAAGLMYLTLTLVSNRV---IAIIE 231

Query: 397 KK 398
           K+
Sbjct: 232 KR 233


>gi|77460512|ref|YP_350019.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77384515|gb|ABA76028.1| L-arginine ABC transporter membrane protein / L-ornithine ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 229

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I  + ++    +L      Y    ++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAY----LS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A G++  +    VL+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGMSSFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|15902668|ref|NP_358218.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|116516616|ref|YP_816114.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|15458207|gb|AAK99428.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116077192|gb|ABJ54912.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
          Length = 226

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 90/171 (52%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV  ADL+ V   +I    +T  A+ ++++ ++ + L +S++ +    R+ 
Sbjct: 163 AVALADLMYVAKDLIGLYYETDIALAMLVVAYLIMLLPISLVFSWIERRIR 213


>gi|296103993|ref|YP_003614139.1| histidine/lysine/arginine/ornithine transport system permease
           protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058452|gb|ADF63190.1| histidine/lysine/arginine/ornithine transport system permease
           protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 238

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPYGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|270263423|ref|ZP_06191692.1| transporter [Serratia odorifera 4Rx13]
 gi|270042307|gb|EFA15402.1| transporter [Serratia odorifera 4Rx13]
          Length = 221

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP+L      ++L   +  L               +++ I L  Y+     EI+R
Sbjct: 75  FIVFGLPSL-----GWKLTAGQAAL---------------LAMVINLGAYST----EIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+   P+GQ EA   LG +  +    ++LP +++ I P L SQ + ++  SS+   V F
Sbjct: 111 AGIQVTPKGQWEAGRVLGFSRSQTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSF 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +L      I ++T  + E+ L+    YL LS+++
Sbjct: 171 EELTFAANLIQSRTFLSFEVYLVTTLFYLLLSVLM 205


>gi|229589727|ref|YP_002871846.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229361593|emb|CAY48470.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 244

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 72/136 (52%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G +     F  + I +S +  AF AE +R+G+ AVP   +EAA +L  + R+    V L
Sbjct: 102 VGAANPLTPFAWVVIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFSRRQLLWNVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q+   +E++++ +  +  
Sbjct: 162 PLALRFALPSLINNLIDLVKMTAVASAIAVGDITYASIMIWTQSDNVLELMILILSFFGL 221

Query: 377 LSIMIALFMNRLNAKI 392
           LS ++      L A++
Sbjct: 222 LSFIVNCVGRYLEARL 237


>gi|294101062|ref|YP_003552920.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616042|gb|ADE56196.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 224

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 68/113 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L   +AA+ ++I R  ++++  GQM AA +LG+   +A   ++LPQA+R  +P
Sbjct: 88  FSTAVVVLGLRSAAYQSQIFRGSILSLGEGQMLAARSLGMNKLQAIIWIILPQALRIALP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             +++Y  LL +SS+  A+G  ++++    ++++T + + I L    I++ L+
Sbjct: 148 GWSNEYPILLTDSSVTYAIGVLEILTRANLVVSRTYKPMPIFLTCAIIFILLN 200


>gi|189425081|ref|YP_001952258.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           lovleyi SZ]
 gi|189421340|gb|ACD95738.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           lovleyi SZ]
          Length = 748

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 14/142 (9%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYI+  ++ G P LVL+ L + + F               +SP  +++ IA      A+ 
Sbjct: 580 LYIA--ILRGTPVLVLLMLIFYVVF-----------ASINISPVIVAV-IAFGMNFGAYT 625

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R+G+  V +GQ EA I+LG T       ++LPQ +R I+P    ++++L+K +S+ 
Sbjct: 626 AEIFRTGIEGVEKGQTEAGISLGFTRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIV 685

Query: 342 VAVGFADLVSVGGTIINQTGQA 363
             +   DL      I ++T  A
Sbjct: 686 GYIAVQDLTKASDIIRSRTFDA 707


>gi|91787396|ref|YP_548348.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696621|gb|ABE43450.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 220

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 6/119 (5%)

Query: 267 MSLYIALSCYTA------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           + L + L+C  A      A+  EIVR+GL A P GQ+EAA++L LT R+    V+LP A+
Sbjct: 84  LRLPVELACVLAMVLNLGAYACEIVRAGLQATPEGQLEAAMSLALTPRQTFFHVVLPPAL 143

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             I P L SQ + ++  S++   +   +L      I ++T ++ E  ++    Y+ L+I
Sbjct: 144 ARIWPALVSQIIIVMLGSAVCGQISAEELSQAANLISSRTFRSFESYIVVTVAYVLLAI 202


>gi|311104486|ref|YP_003977339.1| arginine/ornithine transporter AotM [Achromobacter xylosoxidans A8]
 gi|310759175|gb|ADP14624.1| arginine/ornithine transport protein AotM [Achromobacter
           xylosoxidans A8]
          Length = 229

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 77/145 (53%), Gaps = 12/145 (8%)

Query: 222 LYISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSC 275
           L+ S+++ F  G+P+LVL+ L Y        L QF+ +  +      S  ++  ++ L+ 
Sbjct: 52  LFASSYIGFFRGVPSLVLLYLIYS------GLPQFSIVRDTFLWNVFSNAYVCAWLGLAL 105

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             + F+AEI+R GL A+P+G +EAA  LGL   +    + +P   R ++    ++ L ++
Sbjct: 106 THSGFMAEIIRGGLAAIPKGTIEAAQTLGLKPAQILFRLRIPLVARYVLRAYQNELLIMV 165

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K+++   A+   DL +   T+ + T
Sbjct: 166 KSTAAVSAITLVDLTAAANTVFDYT 190


>gi|307264381|ref|ZP_07545968.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870268|gb|EFN02025.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 225

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 29/173 (16%)

Query: 192 FSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           FS V G +  L         R    F+ +T + +P+L     L FGL T       + LH
Sbjct: 35  FSLVFGTLFGLLMRANNILVRAVCRFYLETIRIVPILVWLFALYFGLSTW------FNLH 88

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                           +S  ++ +++  + +  A + ++VR  L ++ + Q+E+A ALGL
Sbjct: 89  ----------------ISGFWVCIWV-FTLWGVAEMGDLVRGALASIEKHQIESAKALGL 131

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              +  + + LPQ  R ++P   + +  ++K SSLA  +G  ++V VG  II 
Sbjct: 132 NRWQIFQYIELPQGTRRVLPGAINLFTRMVKTSSLAALIGVIEMVKVGQQIIE 184


>gi|291618213|ref|YP_003520955.1| HisM [Pantoea ananatis LMG 20103]
 gi|291153243|gb|ADD77827.1| HisM [Pantoea ananatis LMG 20103]
          Length = 253

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 122 LAFTLNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPVYSNE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLN 389
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF  RL 
Sbjct: 182 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF--RLA 239

Query: 390 AKIALKEKK 398
            +  L   K
Sbjct: 240 ERRWLAHVK 248


>gi|218548238|ref|YP_002382029.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia fergusonii ATCC 35469]
 gi|218355779|emb|CAQ88392.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia fergusonii
           ATCC 35469]
 gi|323967748|gb|EGB63160.1| inner membrane transport system [Escherichia coli M863]
 gi|323977492|gb|EGB72578.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324112844|gb|EGC06820.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|327252578|gb|EGE64237.1| histidine transport system permease protein hisM [Escherichia coli
           STEC_7v]
          Length = 238

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|92112665|ref|YP_572593.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795755|gb|ABE57894.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 243

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 61/114 (53%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  E++R  L++VP G++ A  A GL   +    + LP+A++  +P LT + + LLK+
Sbjct: 113 GAYTGEVLRGALLSVPEGELAAGRAFGLNRWQILYRLWLPRAIQMCLPTLTGELILLLKS 172

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             L   +   DL+     + ++T    E +L+   IYL+L++++   M  +  +
Sbjct: 173 VPLVSTIALMDLLKAANMVRDETFLVYEPLLLIAGIYLALTLVLTSVMRLIEQR 226



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +D  Y  A+  GFVNT WL     +    +  +    RL   + +A +      V R 
Sbjct: 5   WLTDPFYQKALWTGFVNTLWLVAVSAVCGFALAVVFAVTRLRGPRPLAMLVTGVTTVVRG 64

Query: 139 IPPLVVIFFLYKSVLSVLP-IPD--HSIVLP 166
            P LV +FF Y  V  +LP IP    S++ P
Sbjct: 65  TPLLVQLFFFYDGVGRLLPEIPGVRESLIWP 95


>gi|218705837|ref|YP_002413356.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli UMN026]
 gi|293405773|ref|ZP_06649765.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|298381456|ref|ZP_06991055.1| histidine transport system permease hisM [Escherichia coli
           FVEC1302]
 gi|300896989|ref|ZP_07115468.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|331663823|ref|ZP_08364733.1| histidine transport system permease protein HisM [Escherichia coli
           TA143]
 gi|331673810|ref|ZP_08374573.1| histidine transport system permease protein HisM [Escherichia coli
           TA280]
 gi|218432934|emb|CAR13828.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli UMN026]
 gi|284922295|emb|CBG35380.1| histidine ABC transporter, permease protein [Escherichia coli 042]
 gi|291427981|gb|EFF01008.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|298278898|gb|EFI20412.1| histidine transport system permease hisM [Escherichia coli
           FVEC1302]
 gi|300359170|gb|EFJ75040.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|331059622|gb|EGI31599.1| histidine transport system permease protein HisM [Escherichia coli
           TA143]
 gi|331069083|gb|EGI40475.1| histidine transport system permease protein HisM [Escherichia coli
           TA280]
          Length = 238

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|89900316|ref|YP_522787.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89345053|gb|ABD69256.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 229

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 19/190 (10%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ---FNFIGGST---VSPEFMSLYI 271
           AL  LY  T +I G+P LVL+ L     F    +G    F  +G  T   ++P F  + +
Sbjct: 47  ALATLY--TTIIRGIPELVLMLLV----FYGGTIGLNNLFEAMGSETTVDINPFFAGV-L 99

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +     A++ E  R  ++A+P+GQ EAA A G+   +    +  PQ +R  +P  T+ +
Sbjct: 100 TIGFIYGAYMTETFRGAILAIPKGQAEAAWAFGMGRTQTFMRITAPQMVRYALPGFTNNW 159

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI---WMFIYLSLSIMIALFMNRL 388
           L L+K ++L   +G  ++  +       T       L       IY ++S+M+   + RL
Sbjct: 160 LVLIKATALVSLIGLQEMTYLAKQASAATRSPFAYFLFTAALFLIYTTVSLMV---LRRL 216

Query: 389 NAKIALKEKK 398
           NA+ +L  K+
Sbjct: 217 NARYSLGTKR 226


>gi|187732192|ref|YP_001881130.1| histidine ABC transporter permease HisQ [Shigella boydii CDC
           3083-94]
 gi|187429184|gb|ACD08458.1| histidine ABC transporter, permease protein HisQ [Shigella boydii
           CDC 3083-94]
          Length = 228

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L +  L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 217



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSELIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|325520347|gb|EGC99483.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 158

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 63/133 (47%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R   ++VPRGQ+EA  A G+   +    +L PQ MR  +P
Sbjct: 23  FVAGVVTLGFIYGAYFTETFRGAFLSVPRGQLEAGFAYGMNGWRVFHRILFPQMMRFALP 82

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  L+K ++L   +G AD+V         T       L    IYL+++ +  L +
Sbjct: 83  GIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTLDFFFFTLAAGAIYLAITTVSNLVL 142

Query: 386 NRLNAKIALKEKK 398
           + L  + +   ++
Sbjct: 143 HHLEKRYSAGVRR 155


>gi|299065104|emb|CBJ36268.1| putative amino-acid ABC transporter [Ralstonia solanacearum CMR15]
          Length = 223

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L    +A+ AE  R+G+ AV  GQ EAA A+G+      R V+LPQA R  +P
Sbjct: 90  FQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMRGALIMRRVILPQAFRIALP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           P  +  + +LK+SSL   +  A++   G  I + T Q
Sbjct: 150 PYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQ 186


>gi|254509570|ref|ZP_05121637.1| glutamine ABC transporter permease protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221533281|gb|EEE36269.1| glutamine ABC transporter permease protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 269

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 52/84 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A++AEI RSG+ +V   Q  AA++LGL+ R+  R V+LPQA+R+++P   + 
Sbjct: 144 LALILTYSAYVAEIFRSGIDSVHHSQRAAALSLGLSERQVMRDVVLPQAIRNVVPSQMNM 203

Query: 331 YLNLLKNSSLAVAVGFADLVSVGG 354
            + L K+ SL   +G  ++    G
Sbjct: 204 LIALQKDVSLLSFIGPVEIFRQAG 227


>gi|194398286|ref|YP_002037360.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194357953|gb|ACF56401.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
          Length = 226

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 8/136 (5%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN 358
           AV  ADL+ V   +I 
Sbjct: 163 AVALADLMYVAKDLIG 178


>gi|167748155|ref|ZP_02420282.1| hypothetical protein ANACAC_02899 [Anaerostipes caccae DSM 14662]
 gi|167652147|gb|EDR96276.1| hypothetical protein ANACAC_02899 [Anaerostipes caccae DSM 14662]
          Length = 219

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 68/121 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   A++++E  R GL AV + Q E+ +++GLT  +  R ++LPQA+   +P + + 
Sbjct: 91  IGLTFLGASYMSEAFRGGLEAVNKIQEESGLSIGLTKPQLMRYIILPQALAIAMPSVGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +S+  A+  ADL+ V   +I    +  E + + +  YL + + I++  + L  
Sbjct: 151 VIFLLKETSVFSAIALADLMFVAKDLIGMYYKTNEALFMLVVAYLIILLPISVIFSVLER 210

Query: 391 K 391
           K
Sbjct: 211 K 211


>gi|89893486|ref|YP_516973.1| hypothetical protein DSY0740 [Desulfitobacterium hafniense Y51]
 gi|89332934|dbj|BAE82529.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 218

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 79/152 (51%), Gaps = 7/152 (4%)

Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
             P+L Q  FI       G ++SP    + + L  + + +++E+ RSG+ A+P+GQ EAA
Sbjct: 63  STPLLVQLYFIFYVLPQAGLSLSPLTAGI-MGLGIHYSTYLSEVYRSGIEAIPQGQWEAA 121

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            AL  +  +    +++PQA+  +IP + +  + + K + L  A+   +++     I + +
Sbjct: 122 KALNFSPWQVWAKIIIPQAVPPVIPVMGNYLITMFKETPLLSAITLVEILQTAKIIGSHS 181

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + +E   I   ++L LS   ++ + RL  ++
Sbjct: 182 FRYLEGFTIVGLLFLLLSYPCSVMIRRLEMRM 213


>gi|15832445|ref|NP_311218.1| histidine transport system membrane protein M [Escherichia coli
           O157:H7 str. Sakai]
 gi|16130242|ref|NP_416810.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24113679|ref|NP_708189.1| histidine transport, membrane protein M [Shigella flexneri 2a str.
           301]
 gi|26248695|ref|NP_754735.1| histidine transport system permease hisM [Escherichia coli CFT073]
 gi|30063733|ref|NP_837904.1| histidine transport, membrane protein M [Shigella flexneri 2a str.
           2457T]
 gi|74312824|ref|YP_311243.1| histidine transport, membrane protein M [Shigella sonnei Ss046]
 gi|82777718|ref|YP_404067.1| histidine transport, membrane protein M [Shigella dysenteriae
           Sd197]
 gi|89109127|ref|AP_002907.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. W3110]
 gi|91211603|ref|YP_541589.1| histidine transport system membrane protein M [Escherichia coli
           UTI89]
 gi|110642511|ref|YP_670241.1| histidine transport system permease protein HisM [Escherichia coli
           536]
 gi|110806270|ref|YP_689790.1| histidine transport, membrane protein M [Shigella flexneri 5 str.
           8401]
 gi|117624497|ref|YP_853410.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli APEC O1]
 gi|157156249|ref|YP_001463651.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E24377A]
 gi|168748159|ref|ZP_02773181.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4113]
 gi|168755062|ref|ZP_02780069.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761252|ref|ZP_02786259.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767936|ref|ZP_02792943.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4486]
 gi|168772964|ref|ZP_02797971.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4196]
 gi|168780165|ref|ZP_02805172.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787217|ref|ZP_02812224.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC869]
 gi|168798480|ref|ZP_02823487.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC508]
 gi|170019384|ref|YP_001724338.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170081923|ref|YP_001731243.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|170679628|ref|YP_001744507.1| histidine ABC transporter permease HisM [Escherichia coli SMS-3-5]
 gi|187732602|ref|YP_001881129.1| histidine ABC transporter permease HisM [Shigella boydii CDC
           3083-94]
 gi|188494599|ref|ZP_03001869.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           53638]
 gi|191169482|ref|ZP_03031216.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           B7A]
 gi|191170271|ref|ZP_03031825.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           F11]
 gi|193062340|ref|ZP_03043435.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E22]
 gi|193068168|ref|ZP_03049132.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E110019]
 gi|194429438|ref|ZP_03061961.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           B171]
 gi|194436125|ref|ZP_03068227.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           101-1]
 gi|195935686|ref|ZP_03081068.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli O157:H7 str. EC4024]
 gi|208808672|ref|ZP_03251009.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4206]
 gi|208814472|ref|ZP_03255801.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820495|ref|ZP_03260815.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398320|ref|YP_002271716.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4115]
 gi|209919807|ref|YP_002293891.1| histidine ABC transporter permease [Escherichia coli SE11]
 gi|215487520|ref|YP_002329951.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217327682|ref|ZP_03443765.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. TW14588]
 gi|218554863|ref|YP_002387776.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli IAI1]
 gi|218559220|ref|YP_002392133.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli S88]
 gi|218690467|ref|YP_002398679.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli ED1a]
 gi|218695906|ref|YP_002403573.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli 55989]
 gi|218700783|ref|YP_002408412.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli IAI39]
 gi|227887365|ref|ZP_04005170.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein HisM [Escherichia coli 83972]
 gi|237704784|ref|ZP_04535265.1| histidine transport system membrane protein M [Escherichia sp.
           3_2_53FAA]
 gi|238901482|ref|YP_002927278.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|253772769|ref|YP_003035600.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162316|ref|YP_003045424.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|254794200|ref|YP_003079037.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|256017535|ref|ZP_05431400.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Shigella sp. D9]
 gi|256022008|ref|ZP_05435873.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia sp.
           4_1_40B]
 gi|260844894|ref|YP_003222672.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O103:H2 str. 12009]
 gi|260856351|ref|YP_003230242.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O26:H11 str. 11368]
 gi|260869029|ref|YP_003235431.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O111:H- str. 11128]
 gi|261223238|ref|ZP_05937519.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259212|ref|ZP_05951745.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283548|ref|YP_003500366.1| Histidine transport system permease protein hisM [Escherichia coli
           O55:H7 str. CB9615]
 gi|293415599|ref|ZP_06658242.1| histidine transport system permease hisM [Escherichia coli B185]
 gi|293446644|ref|ZP_06663066.1| histidine transport system permease hisM [Escherichia coli B088]
 gi|297520316|ref|ZP_06938702.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           OP50]
 gi|300818090|ref|ZP_07098302.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300822181|ref|ZP_07102323.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300903697|ref|ZP_07121612.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300918521|ref|ZP_07135114.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300924576|ref|ZP_07140538.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300931335|ref|ZP_07146667.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300948544|ref|ZP_07162638.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300956425|ref|ZP_07168716.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300980891|ref|ZP_07175237.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300983440|ref|ZP_07176589.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301023554|ref|ZP_07187318.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301024138|ref|ZP_07187848.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|301049065|ref|ZP_07196049.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|301303231|ref|ZP_07209356.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301328808|ref|ZP_07221853.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301647590|ref|ZP_07247387.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306814581|ref|ZP_07448743.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           NC101]
 gi|307138972|ref|ZP_07498328.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           H736]
 gi|307311132|ref|ZP_07590776.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309784983|ref|ZP_07679616.1| histidine transport system permease protein hisM [Shigella
           dysenteriae 1617]
 gi|309793190|ref|ZP_07687618.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|312967607|ref|ZP_07781822.1| histidine transport system permease protein hisM [Escherichia coli
           2362-75]
 gi|312973433|ref|ZP_07787605.1| histidine transport system permease protein hisM [Escherichia coli
           1827-70]
 gi|331642946|ref|ZP_08344081.1| histidine transport system permease protein HisM [Escherichia coli
           H736]
 gi|331647962|ref|ZP_08349054.1| histidine transport system permease protein HisM [Escherichia coli
           M605]
 gi|331653750|ref|ZP_08354751.1| histidine transport system permease protein HisM [Escherichia coli
           M718]
 gi|331669006|ref|ZP_08369854.1| histidine transport system permease protein HisM [Escherichia coli
           TA271]
 gi|331678253|ref|ZP_08378928.1| histidine transport system permease protein HisM [Escherichia coli
           H591]
 gi|331683978|ref|ZP_08384574.1| histidine transport system permease protein HisM [Escherichia coli
           H299]
 gi|84028921|sp|P0AEU5|HISM_ECO57 RecName: Full=Histidine transport system permease protein hisM
 gi|84028922|sp|P0AEU4|HISM_ECOL6 RecName: Full=Histidine transport system permease protein hisM
 gi|84028923|sp|P0AEU3|HISM_ECOLI RecName: Full=Histidine transport system permease protein hisM
 gi|84028924|sp|P0AEU6|HISM_SHIFL RecName: Full=Histidine transport system permease protein hisM
 gi|26109100|gb|AAN81303.1|AE016763_262 Histidine transport system permease protein hisM [Escherichia coli
           CFT073]
 gi|1788645|gb|AAC75367.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1799688|dbj|BAA16153.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K12 substr. W3110]
 gi|13362661|dbj|BAB36614.1| histidine transport system membrane protein M [Escherichia coli
           O157:H7 str. Sakai]
 gi|24052745|gb|AAN43896.1| histidine transport, membrane protein M [Shigella flexneri 2a str.
           301]
 gi|30041988|gb|AAP17714.1| histidine transport, membrane protein M [Shigella flexneri 2a str.
           2457T]
 gi|73856301|gb|AAZ89008.1| histidine transport, membrane protein M [Shigella sonnei Ss046]
 gi|81241866|gb|ABB62576.1| histidine transport, membrane protein M [Shigella dysenteriae
           Sd197]
 gi|91073177|gb|ABE08058.1| histidine transport system membrane protein M [Escherichia coli
           UTI89]
 gi|110344103|gb|ABG70340.1| histidine transport system permease protein HisM [Escherichia coli
           536]
 gi|110615818|gb|ABF04485.1| histidine transport, membrane protein M [Shigella flexneri 5 str.
           8401]
 gi|115513621|gb|ABJ01696.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli APEC O1]
 gi|157078279|gb|ABV17987.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E24377A]
 gi|169754312|gb|ACA77011.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169889758|gb|ACB03465.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|170517346|gb|ACB15524.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           SMS-3-5]
 gi|187429594|gb|ACD08868.1| histidine ABC transporter, permease protein HisM [Shigella boydii
           CDC 3083-94]
 gi|187771251|gb|EDU35095.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4196]
 gi|188017304|gb|EDU55426.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4113]
 gi|188489798|gb|EDU64901.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           53638]
 gi|189001981|gb|EDU70967.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4076]
 gi|189357678|gb|EDU76097.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363002|gb|EDU81421.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4486]
 gi|189368323|gb|EDU86739.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4501]
 gi|189372783|gb|EDU91199.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC869]
 gi|189378914|gb|EDU97330.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC508]
 gi|190900484|gb|EDV60299.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           B7A]
 gi|190909787|gb|EDV69372.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           F11]
 gi|192932006|gb|EDV84605.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E22]
 gi|192958447|gb|EDV88886.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E110019]
 gi|194412499|gb|EDX28798.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           B171]
 gi|194424853|gb|EDX40838.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           101-1]
 gi|195183046|dbj|BAG66606.1| arginine transporter subunit [Escherichia coli O111:H-]
 gi|208728473|gb|EDZ78074.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4206]
 gi|208735749|gb|EDZ84436.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4045]
 gi|208740618|gb|EDZ88300.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4042]
 gi|209159720|gb|ACI37153.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4115]
 gi|209764898|gb|ACI80761.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209764900|gb|ACI80762.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209764902|gb|ACI80763.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209764904|gb|ACI80764.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209764906|gb|ACI80765.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209913066|dbj|BAG78140.1| histidine ABC transporter permease component [Escherichia coli
           SE11]
 gi|215265592|emb|CAS09995.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217320049|gb|EEC28474.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. TW14588]
 gi|218352638|emb|CAU98419.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli 55989]
 gi|218361631|emb|CAQ99225.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli IAI1]
 gi|218365989|emb|CAR03733.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli S88]
 gi|218370769|emb|CAR18582.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli IAI39]
 gi|218428031|emb|CAR08951.2| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli ED1a]
 gi|222034063|emb|CAP76804.1| Histidine transport system permease protein hisM [Escherichia coli
           LF82]
 gi|226901150|gb|EEH87409.1| histidine transport system membrane protein M [Escherichia sp.
           3_2_53FAA]
 gi|227835715|gb|EEJ46181.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein HisM [Escherichia coli 83972]
 gi|238861421|gb|ACR63419.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|242377940|emb|CAQ32709.1| hisM, subunit of histidine ABC transporter and
           lysine/arginine/ornithine ABC Transporter [Escherichia
           coli BL21(DE3)]
 gi|253323813|gb|ACT28415.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974217|gb|ACT39888.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|253978384|gb|ACT44054.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BL21(DE3)]
 gi|254593600|gb|ACT72961.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Escherichia coli O157:H7
           str. TW14359]
 gi|257755000|dbj|BAI26502.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O26:H11 str. 11368]
 gi|257760041|dbj|BAI31538.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O103:H2 str. 12009]
 gi|257765385|dbj|BAI36880.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O111:H- str. 11128]
 gi|260448599|gb|ACX39021.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281179393|dbj|BAI55723.1| histidine ABC transporter permease component [Escherichia coli
           SE15]
 gi|281601748|gb|ADA74732.1| Histidine transport system permease protein hisM [Shigella flexneri
           2002017]
 gi|290763421|gb|ADD57382.1| Histidine transport system permease protein hisM [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323474|gb|EFE62902.1| histidine transport system permease hisM [Escherichia coli B088]
 gi|291433247|gb|EFF06226.1| histidine transport system permease hisM [Escherichia coli B185]
 gi|294491382|gb|ADE90138.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           IHE3034]
 gi|299880789|gb|EFI89000.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300299112|gb|EFJ55497.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300307704|gb|EFJ62224.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300316774|gb|EFJ66558.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300396682|gb|EFJ80220.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300404279|gb|EFJ87817.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300408528|gb|EFJ92066.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300414335|gb|EFJ97645.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300419207|gb|EFK02518.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300451954|gb|EFK15574.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300460840|gb|EFK24333.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300525311|gb|EFK46380.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529234|gb|EFK50296.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300841405|gb|EFK69165.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300844808|gb|EFK72568.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301074280|gb|EFK89086.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|305851975|gb|EFM52427.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           NC101]
 gi|306908638|gb|EFN39135.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307554368|gb|ADN47143.1| histidine transport system permease protein HisM [Escherichia coli
           ABU 83972]
 gi|307626156|gb|ADN70460.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           UM146]
 gi|308123476|gb|EFO60738.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|308927353|gb|EFP72827.1| histidine transport system permease protein hisM [Shigella
           dysenteriae 1617]
 gi|309702619|emb|CBJ01948.1| histidine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|310332028|gb|EFP99263.1| histidine transport system permease protein hisM [Escherichia coli
           1827-70]
 gi|312287804|gb|EFR15709.1| histidine transport system permease protein hisM [Escherichia coli
           2362-75]
 gi|312946926|gb|ADR27753.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily protein [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|313651131|gb|EFS15530.1| histidine transport system permease protein hisM [Shigella flexneri
           2a str. 2457T]
 gi|315061600|gb|ADT75927.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli W]
 gi|315136942|dbj|BAJ44101.1| histidine transport system permease component [Escherichia coli
           DH1]
 gi|315255244|gb|EFU35212.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315285931|gb|EFU45369.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315292288|gb|EFU51640.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315298160|gb|EFU57424.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|315615576|gb|EFU96208.1| histidine transport system permease protein hisM [Escherichia coli
           3431]
 gi|320178718|gb|EFW53681.1| Histidine ABC transporter, permease protein HisM [Shigella boydii
           ATCC 9905]
 gi|320192069|gb|EFW66714.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC1212]
 gi|320196175|gb|EFW70799.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           WV_060327]
 gi|320199898|gb|EFW74487.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           EC4100B]
 gi|320641135|gb|EFX10614.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O157:H7 str. G5101]
 gi|320646523|gb|EFX15442.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O157:H- str. 493-89]
 gi|320651620|gb|EFX20000.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O157:H- str. H 2687]
 gi|320657372|gb|EFX25174.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320663074|gb|EFX30391.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667892|gb|EFX34800.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323156458|gb|EFZ42613.1| histidine transport system permease protein hisM [Escherichia coli
           EPECa14]
 gi|323161644|gb|EFZ47529.1| histidine transport system permease protein hisM [Escherichia coli
           E128010]
 gi|323168521|gb|EFZ54201.1| histidine transport system permease protein hisM [Shigella sonnei
           53G]
 gi|323171990|gb|EFZ57634.1| histidine transport system permease protein hisM [Escherichia coli
           LT-68]
 gi|323176767|gb|EFZ62357.1| histidine transport system permease protein hisM [Escherichia coli
           1180]
 gi|323184373|gb|EFZ69749.1| histidine transport system permease protein hisM [Escherichia coli
           1357]
 gi|323187968|gb|EFZ73263.1| histidine transport system permease protein hisM [Escherichia coli
           RN587/1]
 gi|323377819|gb|ADX50087.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323936597|gb|EGB32884.1| inner membrane transport system [Escherichia coli E1520]
 gi|323940996|gb|EGB37183.1| inner membrane transport system [Escherichia coli E482]
 gi|323944820|gb|EGB40886.1| inner membrane transport system [Escherichia coli H120]
 gi|323952100|gb|EGB47974.1| inner membrane transport system [Escherichia coli H252]
 gi|323956073|gb|EGB51826.1| inner membrane transport system [Escherichia coli H263]
 gi|323961380|gb|EGB56991.1| inner membrane transport system [Escherichia coli H489]
 gi|323973109|gb|EGB68302.1| inner membrane transport system [Escherichia coli TA007]
 gi|324006683|gb|EGB75902.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324013191|gb|EGB82410.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|324020829|gb|EGB90048.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324117815|gb|EGC11714.1| inner membrane transport system [Escherichia coli E1167]
 gi|325496653|gb|EGC94512.1| histidine transport system membrane protein M [Escherichia
           fergusonii ECD227]
 gi|326339660|gb|EGD63471.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. 1125]
 gi|326344122|gb|EGD67883.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. 1044]
 gi|330912130|gb|EGH40640.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           AA86]
 gi|331039744|gb|EGI11964.1| histidine transport system permease protein HisM [Escherichia coli
           H736]
 gi|331043686|gb|EGI15824.1| histidine transport system permease protein HisM [Escherichia coli
           M605]
 gi|331048599|gb|EGI20675.1| histidine transport system permease protein HisM [Escherichia coli
           M718]
 gi|331064200|gb|EGI36111.1| histidine transport system permease protein HisM [Escherichia coli
           TA271]
 gi|331074713|gb|EGI46033.1| histidine transport system permease protein HisM [Escherichia coli
           H591]
 gi|331078930|gb|EGI50132.1| histidine transport system permease protein HisM [Escherichia coli
           H299]
 gi|332088438|gb|EGI93556.1| histidine transport system permease protein hisM [Shigella boydii
           5216-82]
 gi|332100895|gb|EGJ04241.1| histidine transport system membrane protein M [Shigella sp. D9]
          Length = 238

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|226363679|ref|YP_002781461.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242168|dbj|BAH52516.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 214

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 50/81 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  + + ++AE+ R+G+ AVP GQ EAA AL +   +  R ++LPQA+R ++P L +  +
Sbjct: 93  LGIHYSTYMAEVYRAGIEAVPVGQWEAARALSIAPARTWRAIILPQAIRRVVPALGNYAV 152

Query: 333 NLLKNSSLAVAVGFADLVSVG 353
           ++ K++    A+   ++V+  
Sbjct: 153 SMFKDTPFLFAITVVEMVTAA 173


>gi|41704|emb|CAA68510.1| M protein (147AA) [Escherichia coli]
          Length = 147

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 16  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 75

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 76  VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 130


>gi|301799735|emb|CBW32301.1| putative amino-acid ABC transporter integral membrane protein
           [Streptococcus pneumoniae OXC141]
          Length = 206

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 48/214 (22%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 11  SFLLGLIVSII-----RHYRIPVLAQVATAYIELSRNTPLLIHLFFLYFGLPRIGIV--- 62

Query: 242 YQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                   V       F+GGS                   ++AE  RSGL A+ + Q E 
Sbjct: 63  ----LSSEVCATLGLVFLGGS-------------------YMAESFRSGLEAISQTQQEI 99

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN- 358
            +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 100 GLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGL 159

Query: 359 --QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
             +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 160 YYETDIALAMLVVAYLIMLLPISLVFSWIERRLR 193


>gi|90578869|ref|ZP_01234679.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio angustum S14]
 gi|90439702|gb|EAS64883.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio angustum S14]
          Length = 223

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 14/172 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF  I  S V      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLIYY----GP--GQFEGIRDSFVWQWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P+GQ +A  ALG+   K T   LLP A+R  +P  +++ + + K +SLA 
Sbjct: 108 QLFKGAFDAIPKGQWQACRALGM-ETKTTLSTLLPFAIRRSVPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D++     I  QT   + +  I   +YL+++ ++++   RL  K AL
Sbjct: 167 TITIMDIMGYAQRINAQTYDTLTVFAIAGAMYLTVNALLSIAF-RLIEKKAL 217


>gi|325521709|gb|EGD00466.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. TJI49]
          Length = 157

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 48/86 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P
Sbjct: 22  FLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALP 81

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            + + +  L+K ++L   +G AD+V 
Sbjct: 82  GIGNNWQVLVKATALVSIIGLADVVK 107


>gi|254470909|ref|ZP_05084312.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
 gi|211960051|gb|EEA95248.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
          Length = 215

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 1/140 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F  I G  + P   S  I LS Y   F +E+V++GL AV      A  +LG+ +    R
Sbjct: 75  SFIAIAGYPLDP-LWSGTIVLSSYMGVFTSEVVQAGLRAVRPELRRAGRSLGMGYWTEMR 133

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V  P A+R + P      + L K+S+L   +G+ +L+     +IN+T +AI I+L    
Sbjct: 134 YVTAPLALRVVFPSWIGLVIGLTKDSALVGVIGYIELLRASQILINRTNEAILILLGAGL 193

Query: 373 IYLSLSIMIALFMNRLNAKI 392
            Y  +   I+ +   L  K+
Sbjct: 194 FYFIICYPISRYSQTLERKL 213


>gi|330982419|gb|EGH80522.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 221

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 8/129 (6%)

Query: 229 IFGLPTL-VLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFI 281
           +F +P L  L+ +  +L  + P+L Q  FI       G  VS  F S  IA++    A++
Sbjct: 45  MFKVPVLHRLVPVYVELARNTPLLIQLFFIYFALPTLGIRVS-GFASAVIAMTFLGGAYL 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++ 
Sbjct: 104 TEILRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVV 163

Query: 342 VAVGFADLV 350
            AV   +++
Sbjct: 164 SAVAVPEIL 172


>gi|197335320|ref|YP_002156402.1| octopine transport system permease protein OccM [Vibrio fischeri
           MJ11]
 gi|197316810|gb|ACH66257.1| octopine transport system permease protein OccM [Vibrio fischeri
           MJ11]
          Length = 225

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 63/122 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+ AEIVR  +  +P+G++EAA A G+   +  + ++LP A+R  +P  +++
Sbjct: 96  VAFTLNTGAYTAEIVRGSINGLPQGEVEAAKAYGMNQFQTYKRIILPSALRRALPAYSNE 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  S++A  V   DL      + ++     E  +     Y+ L+ +I     +L  
Sbjct: 156 VIFMLHGSAIAGIVTLLDLTGAARLVNSRYYAPFESYIAAGMFYMCLTFIIIFIFKQLET 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|152994485|ref|YP_001339320.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835409|gb|ABR69385.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 220

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 16/176 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG+VL      + R +  +  + +  +Y+   LI   P +V +   + + F  P +G  
Sbjct: 30  ILGVVLGTVCATV-RQYGNRASQRVVSVYVE--LIRNTPFIVQL---FFIFFGLPAIGMM 83

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA-TRL 313
                  +SP   S+ IAL+    A+  EI+R+GL ++  GQ+EAA  LGL  R+  TR+
Sbjct: 84  -------LSPWEASM-IALTINLGAYSTEIIRAGLASISNGQIEAAKVLGLNFRQTLTRV 135

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + +P A   I P LTSQ + ++  S++   +   DL      + ++  +A E  L+
Sbjct: 136 IFIP-AFEKIYPALTSQCIIVMLGSAVISQISVQDLTYAANLVQSRNFRAFESYLV 190


>gi|331658390|ref|ZP_08359352.1| histidine transport system permease protein HisM [Escherichia coli
           TA206]
 gi|331056638|gb|EGI28647.1| histidine transport system permease protein HisM [Escherichia coli
           TA206]
          Length = 227

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 96  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 156 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 210


>gi|331017446|gb|EGH97502.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 229

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P LVLI L +    D      P+LG  ++I    + P  ++    L      +++E  
Sbjct: 58  GIPDLVLILLIFYGGQDLLNRVAPLLGFDDYI---DLDP-LLAGICTLGFIFGVYLSETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+P+GQ EA +A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG
Sbjct: 114 RGAFMAIPKGQAEAGMAYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVG 173

Query: 346 FADLV 350
             D++
Sbjct: 174 LQDMM 178



 Score = 40.8 bits (94), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|317491412|ref|ZP_07949848.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920959|gb|EFV42282.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 238

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 12/186 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLI---ALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIA 272
           + LP + +  F+ FG   L+++        L F + P+  Q N I    VSP F+   IA
Sbjct: 55  RGLPEILVVLFIYFGSAQLLMVLSDGFSLNLGFVQIPI--QLN-IENFEVSP-FVCGVIA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   AA+ ++ +R  L AVP GQ EA  ALGL+       +++PQ  R  +P L +Q+L
Sbjct: 111 LALLYAAYASQTLRGALKAVPEGQREAGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +   DL+    +I  +T +       W  +  ++ ++I LF   +  +I
Sbjct: 171 VLLKDTALVSLISVNDLMLQTKSIATRTQEP----FTWYMVAAAIYLVITLFSQYILKRI 226

Query: 393 ALKEKK 398
            L+  +
Sbjct: 227 ELRTTR 232


>gi|330428744|gb|AEC20078.1| amino-acid ABC transporter permease y4tG [Pusillimonas sp. T7-7]
          Length = 230

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 68/119 (57%), Gaps = 5/119 (4%)

Query: 247 DKPVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           D P+L Q  F+         V P F++  +AL    +A+ +E+ R+G+ ++ RGQ EAA 
Sbjct: 72  DTPLLVQLFFLYYVLPEYGIVLPAFLTGALALGIQYSAYTSEVYRAGIESITRGQTEAAC 131

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           AL L+  +   ++++PQA+  IIP L +  ++++K+  +   V   ++++V   I ++T
Sbjct: 132 ALDLSPLRTFSVIIVPQAIPRIIPALGNYLVSIMKDVPVLSVVSVLEMLNVAKIIGDRT 190



 Score = 42.7 bits (99), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 15/102 (14%)

Query: 69  GFEIDQGIVPYTSDSSYATAIL----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           G E D      TS+  +AT+IL     G V T      G   A ++G ++ A + S  ++
Sbjct: 4   GIEWDT-----TSNWLFATSILPILLKGLVVTIQATVLGFAVAAVLGLVLAALKSSRLRI 58

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           ++W  R+  E  R+ P LV +FFLY        +P++ IVLP
Sbjct: 59  ISWPARLITEFIRDTPLLVQLFFLYYV------LPEYGIVLP 94


>gi|300980890|ref|ZP_07175236.1| putative arginine/ornithine transport protein [Escherichia coli MS
           200-1]
 gi|300307703|gb|EFJ62223.1| putative arginine/ornithine transport protein [Escherichia coli MS
           200-1]
          Length = 228

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P  VL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPGFVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +  +G+LS N+L   I   Y  + R +P  V
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGASGKLSQNRLSGLIFEGYTTLIRGVPGFV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|165977127|ref|YP_001652720.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877228|gb|ABY70276.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 222

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 29/175 (16%)

Query: 192 FSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           FS V G +  L         R    F+ +T + +P+L     L FGL T       + LH
Sbjct: 32  FSLVFGTLFGLLMRANNVFVRAVCRFYLETIRIVPILVWLFALYFGLSTW------FNLH 85

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                           +S  ++ +++  + +  A + ++VR  L ++ + Q+E+A ALGL
Sbjct: 86  ----------------ISGFWVCIWV-FTLWGVAEMGDLVRGALASIEKHQIESARALGL 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
              +  + + LPQ  R ++P   + +  ++K SSLA  +G  ++V VG  II   
Sbjct: 129 NRWQIFQYIELPQGTRRVLPGAINLFTRMVKTSSLAALIGVIEMVKVGQQIIENA 183


>gi|82544789|ref|YP_408736.1| histidine transport system permease protein [Shigella boydii Sb227]
 gi|81246200|gb|ABB66908.1| histidine transport system permease protein [Shigella boydii Sb227]
 gi|320174664|gb|EFW49797.1| Histidine ABC transporter, permease protein HisQ [Shigella
           dysenteriae CDC 74-1112]
 gi|320183764|gb|EFW58598.1| Histidine ABC transporter, permease protein HisQ [Shigella flexneri
           CDC 796-83]
          Length = 228

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L +  L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|145637072|ref|ZP_01792735.1| arginine transport system permease protein [Haemophilus influenzae
           PittHH]
 gi|145269726|gb|EDK09666.1| arginine transport system permease protein [Haemophilus influenzae
           PittHH]
          Length = 219

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+LF T L    ++   +A+ L Y++ F   G P LV    ++ L +  P  GQF +I 
Sbjct: 29  CLALFLTFLLSMENKWIKRAVNL-YLTLFT--GTPLLV----QFFLIYAGP--GQFQWII 79

Query: 259 GSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            S++    S  +    +AL+  +AA+  ++    + A+P+GQ E+  ALGL+ R  T  +
Sbjct: 80  DSSLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVKAIPKGQWESCAALGLS-RLQTLKI 138

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           L+P A++  +P  +++ + + K ++LA  +   D++     +      AI I  I   IY
Sbjct: 139 LIPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIY 198

Query: 375 LSLSIMIALFMNRLNAKI 392
           L ++ +  L + +L  K+
Sbjct: 199 LIITGIATLLLRKLEKKV 216


>gi|163742411|ref|ZP_02149798.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384361|gb|EDQ08743.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 250

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKYQLH 245
           +I + +F +G+++ LF       + +  G  +   LL I T +I  +P LVLI + Y + 
Sbjct: 37  QIALGAFGMGLIIGLFGA-----YGKLYGGPILRDLLAIYTTVIRAVPELVLILILYYVG 91

Query: 246 FD--KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            D    V G F + G   +S     +++ L     A+  E++R  + AVP GQ+EAA + 
Sbjct: 92  TDLINKVAGSFGY-GRVEISGIVAGIWV-LGIVQGAYATEVLRGAIKAVPPGQIEAARSY 149

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           G+      R V +P  M    P L + +L   K+++L   VGFA+L
Sbjct: 150 GMPPFMTMRRVTIPAMMSFATPGLANLWLIATKDTALLAIVGFAEL 195


>gi|148994405|ref|ZP_01823628.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|149005819|ref|ZP_01829558.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|168488380|ref|ZP_02712579.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP195]
 gi|168492228|ref|ZP_02716371.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|307126897|ref|YP_003878928.1| glutamine ABC transporter membrane-spanning permease [Streptococcus
           pneumoniae 670-6B]
 gi|147762759|gb|EDK69719.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147927241|gb|EDK78275.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|183573086|gb|EDT93614.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP195]
 gi|183573530|gb|EDT94058.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|306483959|gb|ADM90828.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 670-6B]
 gi|332074507|gb|EGI84983.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332077127|gb|EGI87589.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 226

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 8/136 (5%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN 358
           AV  ADL+ V   +I 
Sbjct: 163 AVALADLMYVAKDLIG 178


>gi|186473899|ref|YP_001861241.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196231|gb|ACC74195.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 220

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 21/179 (11%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL LF  R  R            +YI  F   G P LV +   + L++  P +G      
Sbjct: 43  VLQLFCGRWVRGMLR--------VYIELFR--GTPFLVQL---FLLYYGGPSIG------ 83

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             T+ P   +  + L  Y +A+ AE  RSG  ++PRG +EAA  LGLT  +A   + +PQ
Sbjct: 84  -ITLEP-LTAGVLGLGLYGSAYFAEAFRSGFQSIPRGHLEAASCLGLTRWQAVLRIQVPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +  I+P LT+  + L K +++   V   +L  V   I + T   +E +L+    YL+L
Sbjct: 142 MLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFVETLLMLCVCYLAL 200


>gi|86360503|ref|YP_472391.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284605|gb|ABC93664.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 211

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP   ++ + LS Y   +++E++R   +AV RGQ +AA +LG T R+    V+ PQA+ 
Sbjct: 62  VSPTIAAI-LGLSLYHGGYLSEVMRPAFLAVERGQHDAADSLGYTFRQKLVRVVAPQAVH 120

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             +P   +  + L+ N +L + +G AD+++    ++ +
Sbjct: 121 IALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMER 158


>gi|77414490|ref|ZP_00790639.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77159469|gb|EAO70631.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
          Length = 267

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V +G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAILSVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L    +Y ++S +I    N 
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQIMGGSDYRYFERYISVAL----VYWAVSFLIEQLGNA 245

Query: 388 LNAKIALKEKK 398
           +  K+A+K  +
Sbjct: 246 IERKMAIKAPR 256


>gi|53728920|ref|ZP_00348272.1| COG0765: ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209156|ref|YP_001054381.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae L20]
 gi|190151022|ref|YP_001969547.1| amino acid ABC transporter permease [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|126097948|gb|ABN74776.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
 gi|189916153|gb|ACE62405.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
          Length = 222

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 29/173 (16%)

Query: 192 FSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           FS V G +  L         R    F+ +T + +P+L     L FGL T       + LH
Sbjct: 32  FSLVFGTLFGLLMRANNILVRAVCRFYLETIRIVPILVWLFALYFGLSTW------FNLH 85

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                           +S  ++ +++  + +  A + ++VR  L ++ + Q+E+A ALGL
Sbjct: 86  ----------------ISGFWVCIWV-FTLWGVAEMGDLVRGALASIEKHQIESAKALGL 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              +  + + LPQ  R ++P   + +  ++K SSLA  +G  ++V VG  II 
Sbjct: 129 NRWQIFQYIELPQGTRRVLPGAINLFTRMVKTSSLAALIGVIEMVKVGQQIIE 181


>gi|22536475|ref|NP_687326.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010355|ref|NP_734750.1| hypothetical protein gbs0281 [Streptococcus agalactiae NEM316]
 gi|76786946|ref|YP_329015.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798684|ref|ZP_00780907.1| amino acid ABC transporter permease protein yjgD [Streptococcus
           agalactiae 18RS21]
 gi|77404971|ref|ZP_00782072.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77410629|ref|ZP_00786989.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|22533305|gb|AAM99198.1|AE014204_16 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|23094707|emb|CAD45926.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76562003|gb|ABA44587.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76585965|gb|EAO62500.1| amino acid ABC transporter permease protein yjgD [Streptococcus
           agalactiae 18RS21]
 gi|77163344|gb|EAO74295.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77176410|gb|EAO79178.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 267

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V +G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAILSVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L    +Y ++S +I    N 
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQIMGGSDYRYFERYISVAL----VYWAVSFLIEQLGNA 245

Query: 388 LNAKIALKEKK 398
           +  K+A+K  +
Sbjct: 246 IERKMAIKAPR 256


>gi|254248930|ref|ZP_04942250.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
 gi|124875431|gb|EAY65421.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
          Length = 243

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 64/133 (48%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P
Sbjct: 108 FAAGVVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  L+K ++L   +G AD+V         T       L    IYL+++ +  + +
Sbjct: 168 GIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVL 227

Query: 386 NRLNAKIALKEKK 398
           + L  + ++  ++
Sbjct: 228 HHLEKRYSVGVRR 240


>gi|317048959|ref|YP_004116607.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950576|gb|ADU70051.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 238

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 107 LAFTLNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I++F
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFVAFGIAAVLYLIISYVLISVF 221


>gi|157144752|ref|YP_001452071.1| hypothetical protein CKO_00479 [Citrobacter koseri ATCC BAA-895]
 gi|157081957|gb|ABV11635.1| hypothetical protein CKO_00479 [Citrobacter koseri ATCC BAA-895]
          Length = 228

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      +     IG   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNAVTDAMGIGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTGSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLFLER 217


>gi|149376082|ref|ZP_01893848.1| ABC-type arginine/histidine transport system, permease component
           [Marinobacter algicola DG893]
 gi|149359719|gb|EDM48177.1| ABC-type arginine/histidine transport system, permease component
           [Marinobacter algicola DG893]
          Length = 240

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 61/119 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+  EI+R  ++A P G++EAA A G++     R ++LP A R  +   +++
Sbjct: 110 LAFTLNTAAYTTEIIRGAIVATPSGEIEAAKAYGMSWALRMRRIILPSAARRGVQAYSNE 169

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + +L  S++A  V   DL      I ++     +  +    +Y++L+ M+     +L 
Sbjct: 170 VIFMLHASAIASVVTLVDLTGAARNIYSRFYAPFDAFIFVALLYMALTFMLVFAFRKLE 228


>gi|150396799|ref|YP_001327266.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150028314|gb|ABR60431.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 276

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 46/75 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI+R  + +VPRGQ E A ALGL  R A   V+LPQAM   + P  ++ + ++K
Sbjct: 156 TAAYQAEILRGAIESVPRGQREGAAALGLPDRIAFFKVILPQAMIVALRPYGNEIILMIK 215

Query: 337 NSSLAVAVGFADLVS 351
            S++   V   DL+ 
Sbjct: 216 GSAIVAIVTVFDLMG 230



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 10/132 (7%)

Query: 57  LSLGIG-FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
           L+LG+G FL+   G++ ++        S YA   L G   T  L  + ++   ++   V 
Sbjct: 36  LALGVGIFLTVVNGWDPEK-------FSRYAPNFLSGLGVTLTLVTASILMGAVVSLPVA 88

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
            GR+S N+L  W+   YV  FR  P +  +F +Y  + S    P    V  +  F +   
Sbjct: 89  LGRMSKNRLWGWLAYAYVYFFRGTPLITQLFLIYYGLGSFR--PQLETVGLWWFFRDAWN 146

Query: 176 LSFPTLTMDTNA 187
            +  T T++T A
Sbjct: 147 CALFTFTLNTAA 158


>gi|83950194|ref|ZP_00958927.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83838093|gb|EAP77389.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 266

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q    G     P ++   I LS    A+++E +R  ++++P GQ E+A +LG +  +  R
Sbjct: 120 QIEVFGTKIPFPGWVKAVIGLSLPVMAYMSEYMRGAILSIPTGQWESAESLGFSRGQTLR 179

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI------ 366
            ++LPQ ++ ++P   + Y  L   + L   VG  D++++    ++  G+   +      
Sbjct: 180 EIILPQTIKRVLPSWMNLYAVLTMATPLVSIVGVNDVMALTRAALSAEGRVDLLIPMYLY 239

Query: 367 ILIWMFIY 374
           IL W F+Y
Sbjct: 240 ILCWFFLY 247


>gi|262275665|ref|ZP_06053474.1| amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Grimontia hollisae CIP 101886]
 gi|262219473|gb|EEY70789.1| amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Grimontia hollisae CIP 101886]
          Length = 222

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 69/125 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+  + AA+++E+ R GL +V +GQ EAA AL ++  K    ++LPQA+   +  + + 
Sbjct: 94  IAIGLHYAAYLSEVYRGGLESVDKGQWEAAKALNMSTFKTYSRIVLPQALPPSLAGMGNY 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K++ +   +G A+L+     I +++ + +E   +   I+L +S+  +L M     
Sbjct: 154 LVGIFKDTPMLSVIGVAELMHTANAIGSESYRFLEPFTLVGVIFLVISLPTSLLMRVTER 213

Query: 391 KIALK 395
           K+  K
Sbjct: 214 KVRQK 218


>gi|261340700|ref|ZP_05968558.1| histidine transport system permease protein HisM [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317116|gb|EFC56054.1| histidine transport system permease protein HisM [Enterobacter
           cancerogenus ATCC 35316]
          Length = 238

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPYGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|170695842|ref|ZP_02886983.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139266|gb|EDT07453.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 220

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 18/196 (9%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+ T A   V   ++G V+++      + F  +  +AL  +YI  F   G P LV +   
Sbjct: 23  TLGTWAAGVVIGMLIGFVIAVL-----QLFCGRWVRALLRVYIELFR--GTPFLVQL--- 72

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           + L++  P  G        T+ P    + + L  Y +A+ AE  RSG  +VP G +EAA 
Sbjct: 73  FLLYYGGPSFGL-------TLEPMTAGV-LGLGLYGSAYFAEAFRSGFESVPPGHLEAAS 124

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            LGLT  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I + T 
Sbjct: 125 CLGLTRMQAVLRIQMPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATF 184

Query: 362 QAIEIILIWMFIYLSL 377
             +E +L+    YL+L
Sbjct: 185 AFVETLLMLCVCYLAL 200


>gi|317012748|gb|ADU83356.1| amino acid ABC transporter permease [Helicobacter pylori
           Lithuania75]
          Length = 240

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+++++    +     +HF  K   A    Y+S  +I G P LV I + +   +
Sbjct: 47  IISFILGLLIAIMVALIKIVPPKHFMHKALLAGVNFYVS--IIRGTPLLVQIVVVF---Y 101

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 102 GLPALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 154 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 213

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 214 YLEAALIYWLFCLVLEVIQKRVE 236


>gi|307544953|ref|YP_003897432.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216977|emb|CBV42247.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 240

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 8/133 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGG---STVSPEFMSLYIALSCY 276
           LL   T +I  +P LVLI L   L+F  P  L Q   + G     VSP F +    ++  
Sbjct: 62  LLACYTTIIRAVPELVLILL---LYFAMPEALNQLLAVAGLGEVEVSP-FAAGIAVIALV 117

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+  E++R  + A+P GQ+EAA +LG++  K  R + LP  +   +P L++ +L   K
Sbjct: 118 QGAYATEVMRGAIRAIPYGQIEAAYSLGMSTAKTFRRITLPAMLPGALPGLSNLWLIATK 177

Query: 337 NSSLAVAVGFADL 349
           +++L   VGF +L
Sbjct: 178 DTALLAVVGFTEL 190


>gi|237732341|ref|ZP_04562822.1| histidine transport system permease hisQ [Citrobacter sp. 30_2]
 gi|226907880|gb|EEH93798.1| histidine transport system permease hisQ [Citrobacter sp. 30_2]
          Length = 228

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 11/163 (6%)

Query: 193 SFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALK-YQLHFDK 248
           S VL +++ L   A +LS+       +A+ L++   T LI G+P LVL+ L  Y L    
Sbjct: 23  SVVLAVLIGLVGAAAKLSQS------RAMGLIFEGYTTLIRGVPDLVLMLLIFYGLQIAL 76

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             +     IG   + P    + I L     A+  E  R   +AVP+G +EAA A G T  
Sbjct: 77  NTITDAIGIGQIDIDPMVAGI-ITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTSS 135

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V 
Sbjct: 136 QIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVK 178


>gi|152971235|ref|YP_001336344.1| histidine and lysine/arginine/ornithine ABC transporter membrane
           protein [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|206578110|ref|YP_002237302.1| histidine ABC transporter, permease protein HisM [Klebsiella
           pneumoniae 342]
 gi|238895826|ref|YP_002920562.1| histidine transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288934236|ref|YP_003438295.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290508439|ref|ZP_06547810.1| histidine transport system permease [Klebsiella sp. 1_1_55]
 gi|329997345|ref|ZP_08302728.1| histidine transport system permease protein HisM [Klebsiella sp. MS
           92-3]
 gi|150956084|gb|ABR78114.1| histidine and lysine/arginine/ornithine transport protein (ABC
           superfamily, membrane) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206567168|gb|ACI08944.1| histidine ABC transporter, permease protein HisM [Klebsiella
           pneumoniae 342]
 gi|238548144|dbj|BAH64495.1| histidine transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288888965|gb|ADC57283.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777833|gb|EFD85830.1| histidine transport system permease [Klebsiella sp. 1_1_55]
 gi|328539094|gb|EGF65130.1| histidine transport system permease protein HisM [Klebsiella sp. MS
           92-3]
          Length = 238

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 64/115 (55%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPAGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|70733737|ref|YP_257377.1| glutamine/glutamate ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68348036|gb|AAY95642.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 221

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 75/133 (56%), Gaps = 8/133 (6%)

Query: 225 STFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYT 277
           +T L+F  P L  LI L  +L  + P+L Q  F+       G  VS  F +  I ++   
Sbjct: 41  ATLLVFRTPYLHRLIGLYVELARNTPLLIQLFFVYFALPALGIKVS-GFTAAIITMTFLG 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E++R+G+ AVP+ Q+E+  ++GL+  +  R V+LPQA    +P L + ++ LLK 
Sbjct: 100 GAYLTEVLRAGVEAVPQAQLESGRSIGLSQWQLLRYVILPQAGILSLPSLFANFIFLLKE 159

Query: 338 SSLAVAVGFADLV 350
           +++  AV   +++
Sbjct: 160 TTVVSAVAVPEIL 172


>gi|56697875|ref|YP_168246.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56679612|gb|AAV96278.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 295

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F   G     P +M   I LS    A I+EIVR  +++VP  Q EAA +L  T  +   
Sbjct: 148 EFEIFGVVIPVPAWMKAVIGLSLPIMANISEIVRGAVMSVPSAQWEAAESLSFTRTQTLW 207

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            ++LPQ  + +IPP  + Y  L   + L   +G        G II  + QA+E
Sbjct: 208 QIILPQCFKRMIPPWMNWYAILTMATPLCSMLGV-------GEIITFSRQAME 253


>gi|299066292|emb|CBJ37476.1| putative Glutamine transport system permease (glnP) abc transporter
           family [Ralstonia solanacearum CMR15]
          Length = 248

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 24/156 (15%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L L               Q N         E+ +  + +     A
Sbjct: 68  PFLIQLMFVFFGLPSLGL---------------QIN---------EWQAALLTVVVNLGA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EIVR+G+   PRGQ+EAA AL ++     R V+L  A++ + P L+SQ + ++  +S
Sbjct: 104 YITEIVRAGIQETPRGQLEAASALAMSRWACFRHVVLRPALQKVWPALSSQIVIVMLGTS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +   +   DL      I ++  +A E  L+   +Y 
Sbjct: 164 VVSQIAAQDLTFAANFIQSRNFRAFETYLVVTVLYF 199


>gi|324324592|gb|ADY19852.1| amino acid ABC transporter, permease [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 221

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 28/178 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +  PLL    FL FGLP+L    +K   +F   +L    F+GG              
Sbjct: 60  EVARNTPLLIQLFFLYFGLPSL---GIKLS-NFSIALLAM-CFLGG-------------- 100

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                 ++ E++RSGL ++ + Q+E+  A+GL   +  R V+LPQA     P L + ++ 
Sbjct: 101 -----GYMTEVIRSGLDSISKSQVESGYAIGLNKWQLFRFVVLPQAATISAPALFANFIF 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMIALFMNR 387
           LLK +S+  A+   +L+     +I+   +  E++++    ++F+++ LS +++    R
Sbjct: 156 LLKETSIVSAIAVPELLYTTTNLISIYYKTSEMLIMLTASYIFLFVPLSFLLSWLERR 213


>gi|258621395|ref|ZP_05716429.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258626822|ref|ZP_05721629.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|262165969|ref|ZP_06033706.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262171176|ref|ZP_06038854.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|258580869|gb|EEW05811.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258586783|gb|EEW11498.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|261892252|gb|EEY38238.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|262025685|gb|EEY44353.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 225

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 6/155 (3%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + + G P LV      QL+     + Q+  + G+     +    +A    T+A+ AEI+R
Sbjct: 58  YFLRGTPLLV------QLYLIYYGMDQWFPVKGTLWEHAWFCALVAFILNTSAYTAEIIR 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             +  +P+G++EAA A G++  +  + ++LP A+R  +P  +++ + +L  S++A  V  
Sbjct: 112 GAINGLPKGEVEAAKAYGMSRLQTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTI 171

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            DL      + ++     E  L     Y++L+ +I
Sbjct: 172 MDLTGAARLVNSRYYAPFEAFLSAGLFYMALTFII 206


>gi|308187617|ref|YP_003931748.1| Histidine transport system, permease component [Pantoea vagans
           C9-1]
 gi|308058127|gb|ADO10299.1| Histidine transport system, permease component [Pantoea vagans
           C9-1]
          Length = 238

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 3/129 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 107 LAFTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPVYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLN 389
            + +L +++LA      DL+ V   I + T Q      +   +YL +S ++I+LF  RL 
Sbjct: 167 VILMLHSTALAFTATVPDLLKVARDINSATYQPFTAFGLAAVLYLIISYVLISLF--RLA 224

Query: 390 AKIALKEKK 398
            +  L   K
Sbjct: 225 ERRWLAHVK 233


>gi|325271440|ref|ZP_08137965.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324103422|gb|EGC00744.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 229

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 12/168 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    ++P    +   L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDIINRVAPLLGYEDYI---DLNPLIAGIG-TLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   + +P+GQ EA +A G++ R+    + +PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFLGIPKGQAEAGLAYGMSARQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
            VG  D++       + T +     L    +YL   S+S++   F+ R
Sbjct: 171 VVGLQDMMFKAKQAADATREPFTFFLAVAALYLVLTSVSLLALKFLER 218



 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|322368977|ref|ZP_08043544.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haladaptatus paucihalophilus DX253]
 gi|320551708|gb|EFW93355.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haladaptatus paucihalophilus DX253]
          Length = 276

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 69/126 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L+    A+I E V+ G+ +V  GQ EAA +LG+++  + R V+LPQA R+ + 
Sbjct: 144 FAAAIIGLTLNHTAYIGEAVKGGINSVSGGQSEAARSLGMSYIDSMRYVVLPQAWRNALA 203

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +  + L+K++SL   +   +L+SV   + + T  A   I++    YL +++ +   +
Sbjct: 204 AIGNDLVILVKDTSLLTVLAIPELISVFRNVNSATFDAWTPIVVVSVAYLVITVPLGKLV 263

Query: 386 NRLNAK 391
             +  +
Sbjct: 264 RTMEER 269


>gi|113460400|ref|YP_718462.1| arginine transporter permease subunit ArtM [Haemophilus somnus
           129PT]
 gi|170717498|ref|YP_001783480.1| arginine ABC transporter permease [Haemophilus somnus 2336]
 gi|112822443|gb|ABI24532.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Haemophilus somnus 129PT]
 gi|168825627|gb|ACA30998.1| binding-protein-dependent transport systems inner membrane
           component [Haemophilus somnus 2336]
          Length = 227

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 98/190 (51%), Gaps = 14/190 (7%)

Query: 213 EKTGKALPL-LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY- 270
           EK   +LP+ L+++ F   G P LV    ++ L +  P  GQF++I  S + P   S + 
Sbjct: 41  EKKWLSLPINLFLTIFT--GTPLLV----QFFLIYAGP--GQFSWIVNSFLWPLLSSAWF 92

Query: 271 ---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              + L+  + A+  ++    + A+ +GQ E+ +ALGL+ R  T  +L+P A++  +P  
Sbjct: 93  CAILTLALNSTAYSTQLFYGAVKAISKGQWESCVALGLS-RWQTLKILVPYALKRALPSY 151

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +++ + + K +SLA  +   D++     +      A+ I  I   IYL ++ +  L + R
Sbjct: 152 SNEIILVFKGTSLASIITILDIMGYARQLYGTEYDALTIYGIAGVIYLIITGIATLLLRR 211

Query: 388 LNAKIALKEK 397
           L  K+ + E+
Sbjct: 212 LERKVLVFER 221


>gi|126727121|ref|ZP_01742958.1| putative glutamine ABC transporter permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126703549|gb|EBA02645.1| putative glutamine ABC transporter permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 287

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 52/84 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A++AEI RSG+ +V   Q  AA++LGL+ R+  R V+LPQA+R+++P   + 
Sbjct: 162 LALILTYSAYVAEIFRSGIDSVHHSQRSAALSLGLSERQVMRDVVLPQAIRNVVPSQMNM 221

Query: 331 YLNLLKNSSLAVAVGFADLVSVGG 354
            + L K+ SL   +G  ++    G
Sbjct: 222 LIALQKDVSLLSFIGPVEIFRQAG 245


>gi|305663951|ref|YP_003860239.1| polar amino acid ABC transporter, inner membrane subunit
           [Ignisphaera aggregans DSM 17230]
 gi|304378520|gb|ADM28359.1| polar amino acid ABC transporter, inner membrane subunit
           [Ignisphaera aggregans DSM 17230]
          Length = 224

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 66/117 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ A++ R  +I V   Q+EAA ++GL+   A R +++PQA R  +P   +++  +LK+
Sbjct: 104 SAYQAQLFRGIIITVSERQLEAAYSIGLSTWNAFRYIVIPQAFRIALPAWINEFSIVLKD 163

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           SS+A A+G  ++ +    + N T   +  ++    IY  +   ++   N L+ K++L
Sbjct: 164 SSMAYAIGVTEIFTQAIHVANATMDYLTPLVFVSIIYFLICYPLSQLSNHLHKKLSL 220


>gi|213691641|ref|YP_002322227.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523102|gb|ACJ51849.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457728|dbj|BAJ68349.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 224

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 52/83 (62%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P+ Q E++  LGL+  +A   V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALQSIPKVQYESSYVLGLSPWQAFSRVILPQAVRRMLPASVNLATRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|119946082|ref|YP_943762.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119864686|gb|ABM04163.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 222

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 59/104 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AEI+R+G+ A   GQ EAA  LGLTHR+    V+LP A + + P L SQ + ++  
Sbjct: 102 GAYSAEIIRAGIEATAIGQWEAAKTLGLTHRQIFMHVILPPAYQRVYPALVSQCIIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           S++   +   +L      + +++  + E  ++   IYL L+I++
Sbjct: 162 SAVVSQISVEELTFAANFVQSRSFLSFESYMLTALIYLFLAILM 205



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 6/66 (9%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           G+VPY          + G   T  L     +   I+GT   AGR+S  + + WIC VY+E
Sbjct: 9   GLVPYLPQ------FVAGVGTTIQLTVISTVLGLILGTYCAAGRISKARWLNWICAVYIE 62

Query: 135 VFRNIP 140
           V RN P
Sbjct: 63  VTRNTP 68


>gi|16519953|ref|NP_444073.1| probable amino-acid ABC transporter permease y4tG [Sinorhizobium
           fredii NGR234]
 gi|2501400|sp|P55661|Y4TG_RHISN RecName: Full=Probable amino-acid ABC transporter permease protein
           y4tG
 gi|2182637|gb|AAB91860.1| probable amino-acid ABC transporter permease y4tG [Sinorhizobium
           fredii NGR234]
          Length = 231

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 5/119 (4%)

Query: 247 DKPVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           D P++ Q  F+         + P F++  +AL    +A+I+E+ R G+ AV  GQ EAA 
Sbjct: 73  DTPLIAQLFFLYYVLPEYGIIFPAFLTGALALGIQYSAYISEVYRGGIQAVDHGQREAAK 132

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +L L   +    V+LPQA+  +IP L +  ++++K+  +   V   ++++    I +QT
Sbjct: 133 SLDLPPARTFTHVILPQAIPRVIPALGNYLVSIMKDVPVLSVVTIVEMLNAAKIIGDQT 191



 Score = 40.8 bits (94), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 14/102 (13%)

Query: 69  GFEIDQGIVPYTSDSSYATAIL----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           GF  D G      + ++A +IL    +G + T   AF G   A ++G +    R    + 
Sbjct: 4   GFTWDTG----NGELAFAISILPMLLMGLITTLQAAFLGFFVACVLGMVFAVLRGMRTRW 59

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           VAW   V +E  R+ P +  +FFLY        +P++ I+ P
Sbjct: 60  VAWPAAVLIEFIRDTPLIAQLFFLYYV------LPEYGIIFP 95


>gi|107026980|ref|YP_624491.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116691823|ref|YP_837356.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105896354|gb|ABF79518.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116649823|gb|ABK10463.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 229

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P
Sbjct: 94  FAAGVVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            + + +  L+K ++L   +G AD+V 
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVK 179


>gi|283786382|ref|YP_003366247.1| histidine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282949836|emb|CBG89459.1| histidine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 228

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   IG   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNAVTEAMGIGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP G +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAFMAVPTGHIEAATAFGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178


>gi|52425741|ref|YP_088878.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307793|gb|AAU38293.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 222

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 51/85 (60%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q EAA ALGL+  +    +LLPQ+++ + P   + +  ++
Sbjct: 99  WGTAEMGDLVRGALTSIEKHQTEAAYALGLSKIQTFIYILLPQSLKRVTPGAINLFTRMI 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQT 360
           K SSLA+ +G  +++ VG  II  +
Sbjct: 159 KTSSLAMLIGVLEVIKVGQQIIETS 183



 Score = 37.4 bits (85), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +AF  +  A I+G ++G    S N  V   CR+Y+E+ R IP L ++F +
Sbjct: 15  LLAGLGITAEIAFVSVFFACILGIVMGVVMTSRNIFVRGFCRLYLEIVRIIPLLAILFIV 74

Query: 149 YKSV 152
           Y  V
Sbjct: 75  YFGV 78


>gi|167750527|ref|ZP_02422654.1| hypothetical protein EUBSIR_01503 [Eubacterium siraeum DSM 15702]
 gi|167656453|gb|EDS00583.1| hypothetical protein EUBSIR_01503 [Eubacterium siraeum DSM 15702]
 gi|291557064|emb|CBL34181.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Eubacterium siraeum V10Sc8a]
          Length = 219

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 32/176 (18%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    F+ +GLP       K  +  D    G     F+GGS                 
Sbjct: 64  PLLVQLFFIYYGLP-------KVGIPTDAETCGIAGLAFLGGS----------------- 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++AE  RSGL +V + Q E+A +LG+   +A R V+LPQAM   IP   +  + L+K 
Sbjct: 100 --YMAEAFRSGLESVDKIQTESAYSLGMNKMQAMRYVILPQAMSVSIPAFVANVIFLMKE 157

Query: 338 SSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMNRLN 389
           +S+  A+   DL+ +   ++   N T +A+ +++  ++ I L +SI+  +   R+ 
Sbjct: 158 TSVFSAISLLDLMFMAKDLMGMYNDTTEALCLLVGFYLIILLPISIVGTIVERRVR 213


>gi|238762601|ref|ZP_04623571.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
 gi|238699246|gb|EEP91993.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
          Length = 231

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A+     A+  E  R     V RGQ+EAA+A G+   +  R ++LPQ +   IP
Sbjct: 93  FISGVLAIGIVFGAYYTETFRGAFQTVDRGQLEAAMAYGMRPSQVFRRIMLPQMLSFAIP 152

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + + +L L+K S+L   +G  D+V     +  Q G+A +
Sbjct: 153 GINNNWLGLMKASALISILGLEDMV----WLAEQAGRATQ 188


>gi|189423808|ref|YP_001950985.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           lovleyi SZ]
 gi|189420067|gb|ACD94465.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           lovleyi SZ]
          Length = 515

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 3/130 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA      A+ AEI R+G+  V +GQ EA I+LG T       ++LPQ +R I+P    +
Sbjct: 383 IAFGMNFGAYTAEIFRTGIEGVEKGQTEAGISLGFTRTSTFLHIVLPQMVRRILPVYKGE 442

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY--LSLSIMIAL-FMNR 387
           +++L+K +S+   +   DL      I ++T  A   +++   +Y  +S ++M +L ++ R
Sbjct: 443 FISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFFPLVMVAILYFLISWTLMQSLEYLER 502

Query: 388 LNAKIALKEK 397
           +      K K
Sbjct: 503 ITDPKYKKRK 512


>gi|108563347|ref|YP_627663.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           HPAG1]
 gi|107837120|gb|ABF84989.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           HPAG1]
          Length = 237

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 93/188 (49%), Gaps = 17/188 (9%)

Query: 191 VFSFVLG----IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG    ++++L      +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 44  IISFILGLFIAVMVALIKIAPPKHFMHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIY 374
            L    IY
Sbjct: 211 YLEAALIY 218


>gi|222080874|ref|YP_002540237.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725553|gb|ACM28642.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 214

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++    L    AA +AEI R  L ++  GQ EA  AL L      R V+ PQA R
Sbjct: 79  ISP-FVAALAGLGLIAAANMAEIYRGALSSIHHGQWEACAALDLGRWSTMRDVVAPQAFR 137

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   S  + L+K +++A  +G  +L   G  +   T + +EI       Y+ LS+ +
Sbjct: 138 VALPSGASYLIGLMKETAVASTIGVTELAYQGNQLSQLTFRGLEIFAFVGLFYIFLSLPV 197

Query: 382 ALFMNRL 388
           A +++RL
Sbjct: 198 A-WLSRL 203


>gi|270292249|ref|ZP_06198463.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279295|gb|EFA25138.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 225

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 19/183 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S + G V+ +  T      H +  + L   Y+    I  +P LVL+ + Y       +
Sbjct: 34  ILSMIFGTVMGIIMTT-----HSRVIRFLTRFYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNFQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|260776170|ref|ZP_05885065.1| histidine ABC transporter permease protein HisM [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607393|gb|EEX33658.1| histidine ABC transporter permease protein HisM [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 225

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGSIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G++EAA A G+      R ++LP A+R  +P  +++ + +L  S++A  V   DL 
Sbjct: 116 GLPKGEVEAAKAYGMGTFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                + ++     E  L     Y++L+ MI
Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMALTFMI 206


>gi|320010631|gb|ADW05481.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces flavogriseus ATCC 33331]
          Length = 214

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 46/68 (67%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  + AA+ +E+ R+G+  VP+GQ EA  AL ++ R+  + V+LPQA+R+++P L + 
Sbjct: 91  VVLGIHYAAYTSEVYRAGIDGVPKGQWEACRALSMSPRRTWQAVILPQAVRNVLPALGNY 150

Query: 331 YLNLLKNS 338
            +++ K +
Sbjct: 151 AISMFKET 158


>gi|163758476|ref|ZP_02165564.1| putative transport system permease abc transporter protein [Hoeflea
           phototrophica DFL-43]
 gi|162284765|gb|EDQ35048.1| putative transport system permease abc transporter protein [Hoeflea
           phototrophica DFL-43]
          Length = 243

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYI-ALSCYTA 278
           +L + T L+  +P LVLI L Y    D   L QF   IG   +    ++  I  +     
Sbjct: 64  ILDVYTTLVRAVPELVLILLLYYAGTDA--LNQFMALIGAEPMDISGLAAGIFVIGVVQG 121

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R    AVP GQ+EAA A G+T  +  R + LP  +   +P L + +L   K++
Sbjct: 122 AYQTEVLRGAFKAVPHGQIEAARAYGMTSFQVLRRITLPGMLPHAVPGLANLWLIATKDT 181

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +L   VG A+L  V      Q G   +   ++ F    L +M+ L  N
Sbjct: 182 ALLAVVGVAELTLV----TRQAGGTTKSYFLFFFAAGLLYLMVTLISN 225


>gi|91783383|ref|YP_558589.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91687337|gb|ABE30537.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 235

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 61/113 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F  + ++L+ Y  +   EIVRSGL AVP   ++AA +LG +  +    + LP AMR    
Sbjct: 102 FTCMVLSLALYNGSIAVEIVRSGLHAVPDATVDAARSLGYSRLRIFWHIQLPMAMRLSTT 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            +T+  ++L+K SS A  V  AD++     I  +  + +E++L     YL L+
Sbjct: 162 QMTNNIVSLIKTSSQAAFVAVADVMYYATQITLENFRNLEVMLTVWVCYLVLA 214


>gi|307708868|ref|ZP_07645328.1| hypothetical protein SMSK564_0113 [Streptococcus mitis SK564]
 gi|307620204|gb|EFN99320.1| hypothetical protein SMSK564_0113 [Streptococcus mitis SK564]
          Length = 158

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 56/105 (53%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +    +++PQ +R ++P  
Sbjct: 27  SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQA 86

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 87  INLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 131


>gi|305433023|ref|ZP_07402179.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|304443724|gb|EFM36381.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 218

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S + +  + ++VR+ L ++P+ Q E+A +LGL   ++   +++PQAMR + P   + 
Sbjct: 92  IVFSIWGSFEMMDLVRTSLKSIPKHQYESAASLGLNKAQSYFYIIIPQAMRRLTPMSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  +   + L+  
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFNNKNDLAPFIIYGLIFFIFFLICYPVTLYSK 211

Query: 387 RLNAK 391
           +L  K
Sbjct: 212 KLEKK 216


>gi|323529859|ref|YP_004232011.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386861|gb|ADX58951.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 220

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y +A+ AE  RSGL +VP G +EAA  LGLT  +A   + +PQ +  I+P LT+ 
Sbjct: 94  LGLGMYGSAYFAEAFRSGLQSVPPGHLEAASCLGLTRTQAVLRIQMPQMLVLIVPALTNL 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            + L K +++   V   +L  V   I + T   +E +L+    YL+L
Sbjct: 154 IIVLSKETAVLSIVTVPELTFVLTGIGSATFAFVETLLMLCVCYLAL 200


>gi|148997218|ref|ZP_01824872.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|168575368|ref|ZP_02721304.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|307067316|ref|YP_003876282.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|147756918|gb|EDK63958.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|183578425|gb|EDT98953.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|306408853|gb|ADM84280.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
          Length = 225

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  MFRTVMGIIMT---------SHSRIIRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|170694470|ref|ZP_02885623.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140604|gb|EDT08779.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 567

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 64/119 (53%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  I  +   AAF AE+ R+G+++V R Q  AA ALG+      R ++LPQ+MR++I
Sbjct: 123 EVSTAVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLRRIILPQSMRAVI 182

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           P L +  + +LK +S+A  +   +L      ++ Q  +   +      IYL L+  I+L
Sbjct: 183 PGLANDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFGAAAVIYLFLTSGISL 241


>gi|254250414|ref|ZP_04943733.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124879548|gb|EAY66904.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 261

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +  F   S   P++  + + L+   +A  AEI R  + ++P  Q +AA +L  +  +  R
Sbjct: 116 EIRFGHASLPFPDWFKVTLGLALPASANFAEIFRGAIQSIPHAQWDAARSLAFSRVQVFR 175

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            ++LPQ +R ++PP  + Y ++   ++LA  VG  DL+       N   +A
Sbjct: 176 WIILPQCVRRMLPPWMNLYASITMATALASLVGVHDLLDTAQVASNTVARA 226


>gi|229592162|ref|YP_002874281.1| putative histidine transporter permease [Pseudomonas fluorescens
           SBW25]
 gi|229364028|emb|CAY51591.1| putative histidine transport system permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 229

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I  + ++    +L      Y    ++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAY----LS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A G++  +    V++PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGLAYGMSSFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|330820139|ref|YP_004349001.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327372134|gb|AEA63489.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 228

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 58/105 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A++    A+  EIVR+G+ AVPRG  EAA AL ++  +A R V+LPQA   + 
Sbjct: 92  EVTAAVLAMTLNLGAYSVEIVRAGMAAVPRGHHEAAAALAMSRAQAFRHVVLPQAFAKVF 151

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           P LTSQ +  +  S++   +  ADL      I ++  +A E   +
Sbjct: 152 PALTSQIVITMLGSAVVSQISVADLTYAASYIQSRNFRAFETYFV 196


>gi|262282450|ref|ZP_06060218.1| amino acid permease [Streptococcus sp. 2_1_36FAA]
 gi|262261741|gb|EEY80439.1| amino acid permease [Streptococcus sp. 2_1_36FAA]
          Length = 225

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 55/105 (52%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT  +    V++PQ +R ++P  
Sbjct: 94  SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTKFQLYYYVIIPQVLRRLLPQA 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 154 INLITRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|157150519|ref|YP_001450273.1| amino acid permease protein SP0710 [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157075313|gb|ABV09996.1| amino acid ABC transporter, permease protein SP0710 [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 225

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 55/105 (52%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT  +    V++PQ +R ++P  
Sbjct: 94  SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTKFQLYYYVIIPQVLRRLLPQA 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 154 INLITRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|153840658|ref|ZP_01993325.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|149745678|gb|EDM56809.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
          Length = 185

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 19/138 (13%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T++ +A    F+ VLG+V +L   RLS     K G  +   Y+   +I   P LV I L
Sbjct: 66  VTLNISAISLFFTLVLGLVTALL--RLS---DSKVGNVIGTTYVE--VIRNTPLLVQIYL 118

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +    PV+G             F +  +ALS +  A+ AEI R+GL ++P+GQ EAA
Sbjct: 119 LYFVF--GPVIGL----------DRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAA 166

Query: 301 IALGLTHRKATRLVLLPQ 318
             LGL+     + V+LPQ
Sbjct: 167 QTLGLSPFYTYKDVILPQ 184


>gi|28870260|ref|NP_792879.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213970378|ref|ZP_03398507.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301381161|ref|ZP_07229579.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302132574|ref|ZP_07258564.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28853507|gb|AAO56574.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213924849|gb|EEB58415.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|331016475|gb|EGH96531.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 221

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 8/129 (6%)

Query: 229 IFGLPTL-VLIALKYQLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFI 281
           +F +P L  L+ +  +L  + P+L Q  FI       G  VS  F S  IA++    A++
Sbjct: 45  MFRVPVLHRLVPVYVELARNTPLLIQLFFIYFALPTMGIRVS-GFASAVIAMTFLGGAYL 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++ 
Sbjct: 104 TEILRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVV 163

Query: 342 VAVGFADLV 350
            AV   +++
Sbjct: 164 SAVAVPEIL 172


>gi|83952545|ref|ZP_00961276.1| ABC polar amino acid transporter, inner membrane subunit
           [Roseovarius nubinhibens ISM]
 gi|83836218|gb|EAP75516.1| ABC polar amino acid transporter, inner membrane subunit
           [Roseovarius nubinhibens ISM]
          Length = 221

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 4/134 (2%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G  +SP F ++ IA     +A+  EI R+G+ +V  GQ EAA + GL   +    V+LP
Sbjct: 87  AGLRLSP-FAAVAIAFLLNNSAYYGEIFRAGIGSVGTGQTEAARSTGLGASQTMAYVVLP 145

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIY 374
           QA+R+++P L S  + ++K +SLA  V  A+++       + T  A  ++L   I++ I 
Sbjct: 146 QAVRNVLPDLISNTIEVVKLTSLASVVSLAEMLYAADMARSVTYSASPLVLAAGIYLVIL 205

Query: 375 LSLSIMIALFMNRL 388
             L  +++ F  R+
Sbjct: 206 WPLVRLVSRFERRI 219



 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 104 MIPATIIGTLVGA-GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           +IP  ++G L  A G LS N+ + W    +V+ FR IPPLV++ F+Y  +
Sbjct: 35  VIPMGLLGGLFAALGMLSQNRALRWATVGFVDFFRAIPPLVLLIFVYSGL 84


>gi|26991171|ref|NP_746596.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148546670|ref|YP_001266772.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24986216|gb|AAN70060.1|AE016645_6 basic amino acid ABC transporter, permease protein [Pseudomonas
           putida KT2440]
 gi|148510728|gb|ABQ77588.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|313497724|gb|ADR59090.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 229

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    ++P    +   L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDIINRVAPLLGYEDYI---DLNPLIAGIG-TLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   + +P+GQ EA +A G++ R+    + +PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFLGIPKGQAEAGVAYGMSPRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|270292250|ref|ZP_06198464.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279296|gb|EFA25139.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 226

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 44/212 (20%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF++G+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 31  SFLVGLIVSVI-----RHYRVPIFSQLATAYIELSRNTPLLIQLFFLYFGLPRIGIV--- 82

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L  +        F+GGS                   ++AE  RSGL AV + Q E  +
Sbjct: 83  --LSSEVCATVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEIGL 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--- 358
           A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    
Sbjct: 122 AIGLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYY 181

Query: 359 QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 182 ETDIALAMLVVAYLIMLLPISLVFSWIERRLR 213


>gi|88596842|ref|ZP_01100078.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190531|gb|EAQ94504.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 218

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    I ++VR  L ++P+ Q E+A +LGL   ++   V++PQAMR + P   + 
Sbjct: 92  IVFSIWGCFEIMDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  L   I L+  
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSR 211

Query: 387 RLNAK 391
           +L  K
Sbjct: 212 KLEKK 216


>gi|77408203|ref|ZP_00784948.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77173218|gb|EAO76342.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 267

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 8/128 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V +G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAILSVDQGEIEAARSLGMTSAQVYRRVIIPNAAVVATPTLINTL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L    +Y ++S +I    N 
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQIMGGSDYRYFERYISVAL----VYWAVSFLIEQLGNA 245

Query: 388 LNAKIALK 395
           +  K+A+K
Sbjct: 246 IERKMAIK 253


>gi|300698250|ref|YP_003748911.1| amino-acid ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
 gi|299074974|emb|CBJ54543.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
          Length = 223

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 22/193 (11%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLL---YISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +GI L   A  L+ +  +   + L  L   Y++  ++  +P L+L+ L +   F  P LG
Sbjct: 28  IGIPLGALAGTLAAYAVQSRSRVLAGLARGYVA--MVRNVPYLILVYLSF---FGLPKLG 82

Query: 253 QFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                    V    M+  +A+ C   YT  +  EI+R+ L +VPRGQ  AA +LG++  +
Sbjct: 83  ---------VPASAMA--VAIGCTALYTGGYFCEILRAALQSVPRGQSGAAQSLGMSRWQ 131

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++ PQ +  +IPP T   + + K+S++   +   ++      +   T    EI+  
Sbjct: 132 VQRYIVAPQLLGFLIPPTTGLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYTEILAA 191

Query: 370 WMFIYLSLSIMIA 382
              IY + S+++A
Sbjct: 192 TAAIYWASSVLLA 204


>gi|218886663|ref|YP_002435984.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757617|gb|ACL08516.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 224

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 87/166 (52%), Gaps = 11/166 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T L  G+P LV +   + L+F  P +G +       + P   S+   + C +AA+ +E V
Sbjct: 59  TALFRGVPLLVQL---FILYFGLPNIGIY-------LEPYAASVLGFILC-SAAYNSEYV 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L+++ +GQ+ AA ALG +  +    +++PQA+R  +P   ++ + L+K SSLA  + 
Sbjct: 108 RGALLSIRQGQLRAAQALGFSTMQTLVSIVVPQAVRRALPGCGNEIVYLIKYSSLAYVIT 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L      + ++T +  E+ L+    YL L  + +  +++L  +
Sbjct: 168 CIELTGEAKVLASRTFRFTEVFLVVGAYYLFLVTVASWLLHKLEER 213


>gi|168482935|ref|ZP_02707887.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1873-00]
 gi|172043646|gb|EDT51692.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1873-00]
          Length = 226

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 8/136 (5%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAISQTQQEIGLAIGLTPLQVFRYVVLPQATAVELPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN 358
           AV  ADL+ V   +I 
Sbjct: 163 AVALADLMYVAKDLIG 178


>gi|148985283|ref|ZP_01818506.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|149003316|ref|ZP_01828205.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|168486796|ref|ZP_02711304.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|237650053|ref|ZP_04524305.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CCRI 1974]
 gi|237822718|ref|ZP_04598563.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758499|gb|EDK65497.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147922481|gb|EDK73600.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|183570292|gb|EDT90820.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|301799734|emb|CBW32300.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae OXC141]
          Length = 225

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 56/105 (53%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +    +++PQ +R ++P  
Sbjct: 94  SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQA 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 154 INLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|242240069|ref|YP_002988250.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132126|gb|ACS86428.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 240

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 2/136 (1%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL-THRKATRLVLLPQAMRS 322
           P F+   +A+   +A++  E+ R+  +AV  G++EAA+A+G+   R+A R +LLPQ  R 
Sbjct: 99  PPFLIGALAIGLISASYQGEVYRAARLAVNAGELEAALAMGMPAWRRAYR-ILLPQVARY 157

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L++ +   LK+S+L    G  +++         T Q     L    IYL L++   
Sbjct: 158 ALPGLSNVWQMSLKDSALVSVTGIVEVMRASQMAAGSTRQYFLFYLAGAAIYLILTVFSN 217

Query: 383 LFMNRLNAKIALKEKK 398
           +   RL  K++   ++
Sbjct: 218 ISFARLEQKMSQPHQR 233


>gi|311278732|ref|YP_003940963.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308747927|gb|ADO47679.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 238

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRAVPAGEVEAARAYGFSSVKLYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S  +I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYGLISLF 221


>gi|253581220|ref|ZP_04858477.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847497|gb|EES75470.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39BFAA]
          Length = 225

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 88/182 (48%), Gaps = 17/182 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           VFS +LG +L +       +   K  K +  +Y+    I  +P LVL+ L Y        
Sbjct: 34  VFSIILGFLLGMVM-----NIPNKIIKFICRIYLEIVRI--MPQLVLLFLVY-------- 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G    +G   +S E  ++ I  + +  A + ++VRS LI++P+ Q ++   LGL   + 
Sbjct: 79  FGAAKHLG-MNLSGETAAV-IVFTFWGTAEMGDLVRSALISIPKHQYDSGYGLGLNKWQV 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQ +R ++P   +    ++K +SL   +G  +++ VG  II+ +        +W
Sbjct: 137 YLYIILPQTIRRLLPSAVNLLTRMIKTTSLVALIGVVEVLKVGKQIIDASRYTNPTAALW 196

Query: 371 MF 372
           ++
Sbjct: 197 VY 198



 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T  +A   M+ + I+G L+G      NK++ +ICR+Y+E+ R +P LV++F +Y
Sbjct: 21  GLWVTIRIALISMVFSIILGFLLGMVMNIPNKIIKFICRIYLEIVRIMPQLVLLFLVY 78


>gi|170700298|ref|ZP_02891311.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170134785|gb|EDT03100.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 261

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +  F   S   P++  + + L+   +A  AEI R  + ++P  Q +AA +L  +  +  R
Sbjct: 116 EIRFGHASLPFPDWFKVTLGLALPASANFAEIFRGAIQSIPHAQWDAARSLAFSRVQVFR 175

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            ++LPQ +R ++PP  + Y ++   ++LA  VG  DL+       N   +A
Sbjct: 176 WIILPQCVRRMLPPWMNLYASIAMATALASLVGVHDLLDTAQVASNTVARA 226


>gi|217032729|ref|ZP_03438213.1| hypothetical protein HPB128_158g8 [Helicobacter pylori B128]
 gi|298736105|ref|YP_003728630.1| putative polar amino acid transport system permease protein
           [Helicobacter pylori B8]
 gi|216945545|gb|EEC24200.1| hypothetical protein HPB128_158g8 [Helicobacter pylori B128]
 gi|298355294|emb|CBI66166.1| putative polar amino acid transport system permease protein
           [Helicobacter pylori B8]
          Length = 237

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           V SF+LG+ +++F   +     +HF  K        Y+S  +I G P LV I + +   +
Sbjct: 44  VTSFILGLFIAVFVALIKIAPPKHFVHKALLTGVNFYVS--IIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233


>gi|93005159|ref|YP_579596.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92392837|gb|ABE74112.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 244

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)

Query: 193 SFVLGIVLSLFAT--RLSRHF--------HEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           S ++G+VL L     +LS  +        +  T + +P L +  F+ +G   L++  LK 
Sbjct: 25  SLIIGMVLGLLGATAKLSNIWLLRKIATVYTATMRGIPELLLVLFIYYGGSILLMSILKK 84

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                    G  +++  S      M+L IA   Y      EI R  +  +P GQ EAA A
Sbjct: 85  --------FGYNDYVEISAFWGGVMALSIAFGAYAT----EIFRMSIQEIPIGQREAAQA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+   +    + LPQ  +  +P L + +L LLK+++L   VG  D++         T Q
Sbjct: 133 IGMRPFQTFYRITLPQVWQIALPGLGNLFLVLLKDTALVSVVGLKDIMYQSSRAAQSTQQ 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                +    IYL L+++I  FM  L  +
Sbjct: 193 PFTFYMAAAIIYLGLTMLITGFMMWLEWR 221


>gi|330811273|ref|YP_004355735.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379381|gb|AEA70731.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 229

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I  + ++    +L      Y    ++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAY----LS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A G+   +    VL+PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGMNGFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLELALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYATVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|308446221|ref|XP_003087125.1| hypothetical protein CRE_25053 [Caenorhabditis remanei]
 gi|308261293|gb|EFP05246.1| hypothetical protein CRE_25053 [Caenorhabditis remanei]
          Length = 210

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 34/202 (16%)

Query: 196 LGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R F +      +  +  PLL    FL +GLP L    +K    F   
Sbjct: 25  VGLICSILITYRVRVFDKIAKIYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFSCG 80

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL AV +GQ+++  ++GL   +
Sbjct: 81  VIG-LTFLGGS-------------------YMAEAFRAGLQAVAKGQIDSGESIGLNPLQ 120

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---- 365
             + V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E    
Sbjct: 121 VFQYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 180

Query: 366 IILIWMFIYLSLSIMIALFMNR 387
           +I+ ++ I L +SI+ +    R
Sbjct: 181 LIMSYLIILLPVSILTSYLEYR 202


>gi|291535161|emb|CBL08273.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Roseburia intestinalis
           M50/1]
          Length = 445

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 20/138 (14%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTG-----KALPLLYISTFLIFGLPTLVLIALKYQ 243
           I V + ++G+V   F   + R  H++ G      AL  LY++  ++ G P ++ + + Y 
Sbjct: 315 ITVLALLVGVVFG-FLIAIVRTNHDRNGGLTILNALCKLYLT--IVRGTPVMIQLLIIYY 371

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F     G+             +   IA    +AA++AEIVRSG++AV  GQ EA  +L
Sbjct: 372 VIFQSIDTGKI------------VVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 419

Query: 304 GLTHRKATRLVLLPQAMR 321
           GL +++    ++LPQA++
Sbjct: 420 GLNYKQTMMSIILPQAVK 437


>gi|297194203|ref|ZP_06911601.1| amino acid ABC transporter transmembrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722542|gb|EDY66450.1| amino acid ABC transporter transmembrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 251

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AEIVR  L +V   Q EA IAL  T  +  RL+LLPQA+  ++P   + 
Sbjct: 89  LALGLSYGAYGAEIVRGALNSVAVSQREAGIALSFTPWQRLRLILLPQAVPEMVPSFCNL 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK ++L   +G  D+      +   T ++ +I  I + IY  L+  +   M  L  
Sbjct: 149 LIELLKGTALVSLLGVGDVSFAAYLVRLATQESAQIYTISLVIYFVLAFALTRSMKALER 208

Query: 391 K 391
           +
Sbjct: 209 R 209


>gi|123442311|ref|YP_001006290.1| amino acid transport system permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122089272|emb|CAL12119.1| amino acid transport system permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 230

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  +A+     A+  E  R     V RGQ+EAA+A G+   +  R ++LPQ +   IP
Sbjct: 93  FVSGVLAIGIVFGAYYTETFRGAFQTVDRGQLEAAVAYGMRPGQVFRRIMLPQMLSFAIP 152

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + + +L L+K S+L   +G  D+V     +  Q G+A +
Sbjct: 153 GINNNWLGLMKASALISILGLEDMV----WLAEQAGRATQ 188


>gi|330967850|gb|EGH68110.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 221

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 8/129 (6%)

Query: 229 IFGLPTL-VLIALKYQLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFI 281
           +F +P L  L+ +  +L  + P+L Q  FI       G  VS  F S  IA++    A++
Sbjct: 45  MFRVPVLHRLVPVYVELARNTPLLIQLFFIYFALPTMGIRVS-GFASAVIAMTFLGGAYL 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++ 
Sbjct: 104 TEILRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVV 163

Query: 342 VAVGFADLV 350
            AV   +++
Sbjct: 164 SAVAVPEIL 172


>gi|327188020|gb|EGE55250.1| amino acid ABC transporter permease [Rhizobium etli CNPAF512]
          Length = 248

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSG 288
           PTLV      QL F   VL  F  N +GG+  +P   F  +   +  + AA  AE +R+G
Sbjct: 84  PTLV------QLMFSFLVLNTFVSNLVGGAQNNPLTPFFWVVAVVGLHIAALHAEAIRAG 137

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP   ++AA  +G +  +  R V +P A R+ +P + +  +NL+K +++  A+  ++
Sbjct: 138 IEAVPASTVDAARGIGFSKLQILRYVEIPLAFRASLPAIVNNLINLVKLTTVGNAIAVSE 197

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +      +  Q    + ++++ +  +  +++++A
Sbjct: 198 ITYASIMVWTQRDNVVSLMIVILLFFSLINLVVA 231


>gi|218460079|ref|ZP_03500170.1| amino acid ABC transporter permease [Rhizobium etli Kim 5]
          Length = 202

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 22/184 (11%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V +FV G+       RLSR F  +   AL   YI  F      T + + L
Sbjct: 21  LTVMGSALALVMAFVAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 67

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P         G T++P   +  +AL     A+ AE+VR  + AV R Q EA 
Sbjct: 68  -FWVYFVLP-------FAGLTLTP-LQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+      +  QT
Sbjct: 119 IALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFHAQVVRAQT 178

Query: 361 GQAI 364
           G  +
Sbjct: 179 GNTL 182


>gi|160903093|ref|YP_001568674.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga
           mobilis SJ95]
 gi|160360737|gb|ABX32351.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga
           mobilis SJ95]
          Length = 223

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 95/195 (48%), Gaps = 32/195 (16%)

Query: 191 VFSFVLGIVLSLFATRLSRHF-------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +  FV+G+++S F       F       +E+  +++PL+ +   + +GLP +        
Sbjct: 30  ILGFVVGVIIS-FGQLYGNKFLQLIFLIYERVFRSIPLIVVLFLIFYGLPAI-------- 80

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                          G  + P   S+ I L   ++A+ ++I R  + ++ +GQ++AA ++
Sbjct: 81  ---------------GIRLDPLIASI-IGLGLISSAYQSQIFRGAISSISKGQLDAAYSI 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +    ++ PQA+R  +    ++   +LK++S+A A+G  +L+  G  II+ T + 
Sbjct: 125 GMNKIQTFIYIIFPQAIRIALSGWINEASVVLKDTSVAYALGVVELLRQGTYIISVTNRP 184

Query: 364 IEIILIWMFIYLSLS 378
           + + LI   IY  L+
Sbjct: 185 LIVYLICGAIYFVLT 199



 Score = 39.7 bits (91), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L F  +I   ++G ++  G+L  NK +  I  +Y  VFR+IP +VV+F +
Sbjct: 14  LLKGTLVTLELTFFSLILGFVVGVIISFGQLYGNKFLQLIFLIYERVFRSIPLIVVLFLI 73

Query: 149 Y 149
           +
Sbjct: 74  F 74


>gi|121610314|ref|YP_998121.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554954|gb|ABM59103.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 218

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 13/131 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGL 289
           G+P LV + L Y   +  P LG         +  + M S  IAL+ + + ++AEI R   
Sbjct: 62  GVPLLVFVFLTY---YSLPKLG---------IRLDAMYSGCIALAVFFSMYVAEIFRGAF 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             +P+ Q EA +ALG++H K   +VLLPQA+R  +P L +    ++K +S+   +G  +L
Sbjct: 110 RTIPKVQTEAGMALGMSHWKIQIIVLLPQALRIALPSLMNIAAIVIKATSVMSIIGVWEL 169

Query: 350 VSVGGTIINQT 360
                 ++ +T
Sbjct: 170 TLATNELVMRT 180


>gi|171317738|ref|ZP_02906920.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097088|gb|EDT41941.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 255

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 63/119 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS    A++A I+R  +  VP G++EA  A G+T     R ++ P+A R  +P LT +
Sbjct: 106 VALSVNEGAYVATILRGAIAGVPAGEIEAGYAYGMTRAGVLRRIVGPRAWRLALPALTGE 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            + LLK++ LA  V   D++    T+  +T +  E +     +Y+ L  ++ +   RL 
Sbjct: 166 AILLLKSTVLASTVTVFDVMGTANTLRFETLRVYEPLAGAAIVYVVLVALLTIPAARLE 224


>gi|15900608|ref|NP_345212.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|111658697|ref|ZP_01409340.1| hypothetical protein SpneT_02000205 [Streptococcus pneumoniae
           TIGR4]
 gi|14972184|gb|AAK74852.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
          Length = 225

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  MFRTVMGIIMT---------SHSRIIRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|310644455|ref|YP_003949214.1| amino acid abc transporter, permease protein [Paenibacillus
           polymyxa SC2]
 gi|309249406|gb|ADO58973.1| Amino acid ABC transporter, permease protein [Paenibacillus
           polymyxa SC2]
          Length = 221

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 5/128 (3%)

Query: 243 QLHFDKPVLGQFNFI--GGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +L  + P+L Q  F+  G + +     E     + ++     ++AE  R G+ AV + Q 
Sbjct: 60  ELSRNTPLLVQLYFLYYGFTKIGLHMSEMTCAIVGMTFLGGGYMAEAFRGGIEAVSKTQT 119

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+ ++LGL+  +  R V+LPQA    IP L +  + LLK +S+  A+   DL++V   +I
Sbjct: 120 ESGLSLGLSKIQLARYVILPQAFSISIPSLGANAIFLLKETSIVGAIALLDLMNVAKDLI 179

Query: 358 NQTGQAIE 365
               +  E
Sbjct: 180 GMYYKTTE 187


>gi|222102792|ref|YP_002539831.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
 gi|221739393|gb|ACM40126.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
          Length = 226

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 60/104 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+ AEI RS L+++PRG +EAA A G++       V  P A+R  +P  +S+   ++K
Sbjct: 107 TCAYTAEIFRSALLSLPRGLIEAAEACGMSGWHIFIRVKFPLALRQALPAYSSEVAIIVK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            SSLA  +   ++      ++++T   ++I +I    YL+++++
Sbjct: 167 ESSLASTITVLEITGYAKRLMSETFAIMDIFIITAAFYLAINVI 210


>gi|325122857|gb|ADY82380.1| histidine ABC transporter, permease protein HisQ [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 229

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 67/133 (50%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VP+GQ+EAA+A G+T  +    VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPKGQIEAAMAYGMTPWQVFYRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  L+K ++L   +G  D+V +       T Q     ++   IYL+++ +  L +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKITQDAGRSTMQLFFFSIVAAAIYLAITTVSNLIL 213

Query: 386 NRLNAKIALKEKK 398
             L  + +   +K
Sbjct: 214 MWLERRYSAGVRK 226


>gi|293365030|ref|ZP_06611747.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307702259|ref|ZP_07639219.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|291316480|gb|EFE56916.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307624272|gb|EFO03249.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 225

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 56/105 (53%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +    +++PQ +R ++P  
Sbjct: 94  SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNFQLYYHIIIPQVLRRLLPQA 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +    ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 154 INLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 198


>gi|307727664|ref|YP_003910877.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588189|gb|ADN61586.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 220

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 21/179 (11%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL LF  R  R        AL  LYI  F   G P LV +   + L++  P  G      
Sbjct: 43  VLQLFCGRWVR--------ALLRLYIELFR--GTPFLVQL---FLLYYGGPSFGL----- 84

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             T+ P    + + L  Y +A+ AE  RSG  +VP G +EAA  LG+T  +A   + +PQ
Sbjct: 85  --TLEPMTAGV-LGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLGMTRTQAVLRIQMPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +  I+P LT+  + L K +++   V   +L  V   I + T   +E +L+    YL+L
Sbjct: 142 MLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFVETLLMLCVCYLAL 200


>gi|256026688|ref|ZP_05440522.1| permease protein of ABC transporter system [Fusobacterium sp. D11]
 gi|289764683|ref|ZP_06524061.1| amino acid ABC transporter [Fusobacterium sp. D11]
 gi|289716238|gb|EFD80250.1| amino acid ABC transporter [Fusobacterium sp. D11]
          Length = 219

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 28/141 (19%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    FL FGLP       K  L F+  + G     F+GGS                 
Sbjct: 64  PLLVQLFFLYFGLP-------KVGLRFNPEICGIIGLTFLGGS----------------- 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT+  + LLK 
Sbjct: 100 --YMIETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFLLKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN 358
           +S+  A+   D++ V   +I 
Sbjct: 158 TSVFSAISLMDMMFVAKDLIG 178


>gi|1166637|gb|AAA85770.1| histidine transport system permease protein HisQ [Escherichia coli]
          Length = 228

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 5/166 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPYLVLMLLIFYGLQIALNTVTEAMGVGQMDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AV +G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRCAFMAVAKGHIEAATAFGFTRGQMCRRIMFPSMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 172 GLEDVVKATQLAGKSTWEPFYFAIVCGLIYLVFTTVSNGVLLFLER 217



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALCTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPYLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|308071225|ref|YP_003872830.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
 gi|305860504|gb|ADM72292.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
          Length = 229

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 6/150 (4%)

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFI--GGSTVS---PEFMSLYIALSC 275
           L  ST L + +  +  I + Y +L  + P+L Q  F+  G + +     E     + ++ 
Sbjct: 46  LLCSTVLYYKVRGISGIVVAYIELSRNTPLLVQLYFLYYGFTKIGLHMSEMTCAIVGMTF 105

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
               ++AE  R G+ AV + Q E+ ++LGL+  +  R V+LPQA    +P L +  + LL
Sbjct: 106 LGGGYMAEAFRGGMEAVSKTQTESGLSLGLSKIQLARYVILPQAFAISVPSLGANAIFLL 165

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           K +S+  A+   DL++V   +I    +  E
Sbjct: 166 KETSIVGAIALLDLMNVAKDLIGMYYKTTE 195


>gi|70731862|ref|YP_261604.1| arginine/ornithine ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68346161|gb|AAY93767.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 229

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I  + ++    +L      Y    ++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGYDDYIDLNPLAAGIGTLGFIFGAY----LS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A G++  +    V++PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGMAYGMSSFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.0 bits (92), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|22125504|ref|NP_668927.1| histidine transport system permease HisM [Yersinia pestis KIM 10]
 gi|45442177|ref|NP_993716.1| histidine transport system permease HisM [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596927|ref|YP_071118.1| ABC histidine transporter, permease subunit HisM [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808061|ref|YP_651977.1| histidine transport system permease HisM [Yersinia pestis Antiqua]
 gi|108812333|ref|YP_648100.1| histidine transport system permease protein HisM [Yersinia pestis
           Nepal516]
 gi|145599263|ref|YP_001163339.1| histidine transport system permease protein HisM [Yersinia pestis
           Pestoides F]
 gi|149365250|ref|ZP_01887285.1| histidine transport system permease protein HisM [Yersinia pestis
           CA88-4125]
 gi|153949106|ref|YP_001400409.1| histidine ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|165925351|ref|ZP_02221183.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937059|ref|ZP_02225624.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008599|ref|ZP_02229497.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166214207|ref|ZP_02240242.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398635|ref|ZP_02304159.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421140|ref|ZP_02312893.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424656|ref|ZP_02316409.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167469029|ref|ZP_02333733.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           FV-1]
 gi|170023781|ref|YP_001720286.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186896007|ref|YP_001873119.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929848|ref|YP_002347723.1| histidine transport system permease HisM [Yersinia pestis CO92]
 gi|229838348|ref|ZP_04458507.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895378|ref|ZP_04510551.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|229898914|ref|ZP_04514059.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902686|ref|ZP_04517803.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|270490137|ref|ZP_06207211.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504639|ref|YP_003568701.1| histidine transport system permease protein HisM [Yersinia pestis
           Z176003]
 gi|21958401|gb|AAM85178.1|AE013764_2 histidine ABC transporter, inner membrane permease [Yersinia pestis
           KIM 10]
 gi|45437041|gb|AAS62593.1| histidine transport system permease protein HisM [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590209|emb|CAH21846.1| ABC histidine transporter, permease subunit HisM [Yersinia
           pseudotuberculosis IP 32953]
 gi|108775981|gb|ABG18500.1| histidine transport system permease protein HisM [Yersinia pestis
           Nepal516]
 gi|108779974|gb|ABG14032.1| histidine transport system permease protein HisM [Yersinia pestis
           Antiqua]
 gi|115348459|emb|CAL21395.1| histidine transport system permease protein HisM [Yersinia pestis
           CO92]
 gi|145210959|gb|ABP40366.1| histidine transport system permease protein HisM [Yersinia pestis
           Pestoides F]
 gi|149291663|gb|EDM41737.1| histidine transport system permease protein HisM [Yersinia pestis
           CA88-4125]
 gi|152960601|gb|ABS48062.1| histidine ABC transporter, permease protein HisM [Yersinia
           pseudotuberculosis IP 31758]
 gi|165914922|gb|EDR33534.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922958|gb|EDR40109.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992981|gb|EDR45282.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166204563|gb|EDR49043.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960629|gb|EDR56650.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051139|gb|EDR62547.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056538|gb|EDR66307.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169750315|gb|ACA67833.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186699033|gb|ACC89662.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229680133|gb|EEO76232.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|229688462|gb|EEO80533.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694714|gb|EEO84761.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701686|gb|EEO89712.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|262362700|gb|ACY59421.1| histidine transport system permease protein HisM [Yersinia pestis
           D106004]
 gi|262366627|gb|ACY63184.1| histidine transport system permease protein HisM [Yersinia pestis
           D182038]
 gi|270338641|gb|EFA49418.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355098|gb|ADE65439.1| histidine transport system permease protein HisM [Yersinia pestis
           Z176003]
 gi|320014578|gb|ADV98149.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 238

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKLYRCIILPAALRISLPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YLS+S  +I+LF
Sbjct: 167 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFSIAAVLYLSISFTLISLF 221


>gi|227818924|ref|YP_002822895.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337923|gb|ACP22142.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
          Length = 226

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 60/104 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+ AEI R+ L+++PRG +EA+ A GL+     R V  P A+R  +P  +S+   ++K
Sbjct: 107 TGAYTAEIFRTALLSLPRGLIEASQACGLSVWSTFRHVRFPLAVRQALPAYSSEVAIIVK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            SSLA  +   ++      ++++T   ++I +I    YL ++++
Sbjct: 167 ESSLASTITVLEITGYAKRLMSETFAIMDIFIITSAFYLMMNVI 210


>gi|121609554|ref|YP_997361.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554194|gb|ABM58343.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 223

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 62/113 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +S    A+  EIVR+G+ A+  GQ+EAA ALG       R V++  A+R++ P L SQ
Sbjct: 95  VGMSINCGAYATEIVRAGIDAIAGGQLEAAHALGFPVPAIVRHVIVFPALRAVFPALASQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +L ++  S++   +   +L  V   I  +  +  E+ ++   IYL+++  + L
Sbjct: 155 FLLVMLGSAVVSTISVEELTGVAHLIETENFRPFEVYIVVTGIYLAIAFSLKL 207


>gi|315612797|ref|ZP_07887708.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis ATCC 49296]
 gi|315314907|gb|EFU62948.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis ATCC 49296]
          Length = 231

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 44/212 (20%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF++G+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 36  SFLVGLIVSVI-----RHYRVPIFSQLATAYIELSRNTPLLIQLFFLYFGLPRIGIV--- 87

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L  +        F+GGS                   ++AE  RSGL AV + Q E  +
Sbjct: 88  --LSSEVCATVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEIGL 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--- 358
           A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    
Sbjct: 127 AIGLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYY 186

Query: 359 QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 187 ETDIALAMLVVAYLIMLLPISLVFSWIERRLR 218


>gi|313891432|ref|ZP_07825048.1| ABC transporter, permease protein [Dialister microaerophilus UPII
           345-E]
 gi|313120207|gb|EFR43383.1| ABC transporter, permease protein [Dialister microaerophilus UPII
           345-E]
          Length = 229

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 50/80 (62%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + ++VRS + ++P+ Q E+A ALG +  +  R +++PQA+  ++PP  + +  ++K +
Sbjct: 105 AEMGDLVRSAVESIPKNQYESAAALGFSKFQMYRFIIIPQAVGFLLPPAINLFTRIIKTT 164

Query: 339 SLAVAVGFADLVSVGGTIIN 358
           SL V +G  +++  G  +I 
Sbjct: 165 SLVVMIGVVEVLKTGQQLIE 184


>gi|167769529|ref|ZP_02441582.1| hypothetical protein ANACOL_00863 [Anaerotruncus colihominis DSM
           17241]
 gi|167668497|gb|EDS12627.1| hypothetical protein ANACOL_00863 [Anaerotruncus colihominis DSM
           17241]
          Length = 257

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AEI+RSG+ +V  GQ EAA ++G+T  +    V+LPQ +++  P + ++++
Sbjct: 109 ISINTGAYMAEILRSGIQSVDVGQTEAARSIGMTSAQTMLHVVLPQGIKNAFPAIGNEFV 168

Query: 333 NLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             +K+SS+  A+   +L      + G+I + T   +   LI++ +  + + ++ +   R+
Sbjct: 169 VNIKDSSVLNAISVTELFFQSNKIAGSIFDFTATFLVTALIYLILTFTTTRILHVIEKRM 228

Query: 389 N 389
            
Sbjct: 229 G 229


>gi|90410450|ref|ZP_01218466.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
 gi|90328691|gb|EAS44975.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
          Length = 223

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF     +F+      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLIYY----GP--GQFEAVRESFLWNWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+  + AT  VLLP A+R  IP  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-DKVATLRVLLPFAIRRAIPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLIVFSVAGVFYLAVNGILTLIFRQVEKK 215


>gi|330819468|ref|YP_004348330.1| transport system membrane protein [Burkholderia gladioli BSR3]
 gi|327371463|gb|AEA62818.1| transport system membrane protein [Burkholderia gladioli BSR3]
          Length = 220

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 14/151 (9%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           ++ S  LG+ +  FA  L++    +  +A   +YI  F   G P LV +   + L++  P
Sbjct: 27  WIASVALGLAIG-FAAALAQQLGGRGARAAIRVYIELFR--GTPFLVQL---FLLYYGGP 80

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             G        T+ P   +   +LS Y  A+  E  RSG  A+P G +EAA  LGLT  +
Sbjct: 81  AFGL-------TLDP-LPAGIASLSLYAGAYFTEAFRSGFAAIPAGHLEAAACLGLTRWQ 132

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
               + LPQ +  I+P LT+  + L K +++
Sbjct: 133 TIARIQLPQMLALILPALTNLTIVLSKETAV 163


>gi|269139577|ref|YP_003296278.1| arginine transporter permease subunit [Edwardsiella tarda EIB202]
 gi|267985238|gb|ACY85067.1| arginine transporter permease subunit [Edwardsiella tarda EIB202]
 gi|304559465|gb|ADM42129.1| Arginine ABC transporter, permease protein ArtQ [Edwardsiella tarda
           FL6-60]
          Length = 238

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 4/117 (3%)

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP+GQ EA +ALGL+       +++PQ  R  +P L +Q+L LLK+++L 
Sbjct: 120 SQTLRGALKAVPQGQREAGMALGLSKTHIFFRLVMPQMWRHALPGLGNQWLVLLKDTALV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   DL+    +I  +T +       W  +  ++ ++I LF   +  +I L+  +
Sbjct: 180 SLISVNDLMLQTKSIATRTQEP----FTWYCVAAAIYLVITLFSQYILKRIELRTTR 232


>gi|209695420|ref|YP_002263349.1| arginine/ornithine periplasmic binding protein-dependent
           transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
 gi|208009372|emb|CAQ79645.1| arginine/ornithine periplasmic binding protein-dependent
           transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
          Length = 225

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 64/122 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+ +EIVR  +  +P+G++EAA A G++  +  + ++LP A+R  +P  +++
Sbjct: 96  VAFALNTGAYTSEIVRGSINGLPQGEIEAAKAYGMSQFQTYKRIILPSALRRALPAYSNE 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  S++A  V   DL      + ++     E  +     Y+ L+ +I     +L  
Sbjct: 156 VIFMLHGSAIAGIVTLMDLTGAARLVNSRYYAPFESYIAAGLFYMCLTFIIIFVFKQLET 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|15902667|ref|NP_358217.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|116516015|ref|YP_816113.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|221231513|ref|YP_002510665.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854221|ref|YP_002735733.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|15458206|gb|AAK99427.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116076591|gb|ABJ54311.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|220673973|emb|CAR68483.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225723804|gb|ACO19657.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|332075993|gb|EGI86459.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 225

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  MFGTVMGIIMT---------SHSRIIRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 82  ARNFNINISGET------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|312962620|ref|ZP_07777110.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311283200|gb|EFQ61791.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 229

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I  + ++    +L      Y    ++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPMLGYDDYIDLNPLAAGIGTLGFIFGAY----LS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +A+P+GQ EA +A G++  +    V++PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFMAIPKGQAEAGLAYGMSGFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|225378342|ref|ZP_03755563.1| hypothetical protein ROSEINA2194_04003 [Roseburia inulinivorans DSM
           16841]
 gi|225209779|gb|EEG92133.1| hypothetical protein ROSEINA2194_04003 [Roseburia inulinivorans DSM
           16841]
          Length = 224

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S E  S+ I    +  A ++++VR  LI++P+ Q E++ ALGLT  +    V++PQ
Sbjct: 86  GWNLSGETASI-IVFVLWGTAEMSDLVRGALISIPKHQYESSAALGLTKMQTYLYVIIPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A+R +IP   +    ++K +SL + +G  +++ V   II 
Sbjct: 145 AVRRLIPLSINLITRMIKTTSLILMIGVVEVLKVAQQIIE 184


>gi|258545107|ref|ZP_05705341.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258519626|gb|EEV88485.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 215

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 51/85 (60%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S +  A + ++VR  L+++   Q E A+A+GL+  +  R VLLPQ++R ++P + +    
Sbjct: 96  SLWGIAEMGDLVRGALVSIDPHQRETALAIGLSPAQVFRYVLLPQSVRRVLPGVVNLLTR 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIIN 358
           ++K ++LA  +G  D+V V   +I 
Sbjct: 156 MIKTTALAALIGVVDVVKVAQQVIE 180


>gi|256831907|ref|YP_003160634.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Jonesia denitrificans DSM 20603]
 gi|256685438|gb|ACV08331.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Jonesia denitrificans DSM 20603]
          Length = 251

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL     A+ AE+VR  + +VP+GQ EA  AL L+  +    ++ PQA   +IP LT+  
Sbjct: 103 ALGLNYGAYGAEVVRGSINSVPQGQWEATTALSLSRTQRMWRIIFPQAWALMIPSLTNLL 162

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNRLN 389
           + LLK +++   +  ADL  + G +   T    A  + LI   +Y  L+ ++ L MN + 
Sbjct: 163 IQLLKGTAIVSIIAMADLTFMLGKLRQDTDTFFAYSVGLI---LYFVLAYILTLGMNAME 219

Query: 390 AKIALK 395
            +   K
Sbjct: 220 VRAKHK 225


>gi|54309260|ref|YP_130280.1| arginine transporter permease subunit ArtM [Photobacterium
           profundum SS9]
 gi|46913692|emb|CAG20478.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum SS9]
          Length = 223

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           L  G P LV I L Y      P  GQF     +F+      P F ++ +AL+  TAA+  
Sbjct: 55  LFTGTPLLVQIFLIYY----GP--GQFEAIRESFLWNWLSQPWFCAM-LALALNTAAYST 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ +    A+P GQ +A  ALG+  + AT  VLLP A+R  IP  +++ + + K +SLA 
Sbjct: 108 QLFKGAFNAIPSGQWQACRALGM-DKFATLRVLLPFAIRRAIPAYSNEVILVFKGTSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 167 TITIMDLMGYAQRINAQTYDTLVVFSIAGAFYLAVNGILTLIFRQVEKK 215


>gi|311694311|gb|ADP97184.1| putative amino acid ABC transporter permease protein [marine
           bacterium HP15]
          Length = 221

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 83/156 (53%), Gaps = 6/156 (3%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +Q++     LG F    G  +SP ++++  AL    A ++ E  R G  ++P  Q  A+ 
Sbjct: 71  FQIYMAYFGLGAF----GIHLSP-YVAVLSALVFINAGYLTETFRGGFQSIPSTQYSASK 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG+T  +  R ++LPQ +R I  P+T+Q++  +  SSL + VG ++L      + + + 
Sbjct: 126 SLGMTSIQTYRYIILPQMLRRIYHPMTNQFVWSILMSSLGILVGMSELSGTTQRLQSLSF 185

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +E  ++   +Y  ++ ++ LF + L A+   K +
Sbjct: 186 RTLEFFIVAAVMYFVITKLV-LFGSSLLARRLFKGE 220


>gi|146319019|ref|YP_001198731.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|146321227|ref|YP_001200938.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|223932681|ref|ZP_03624680.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|253752084|ref|YP_003025225.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis SC84]
 gi|253753909|ref|YP_003027050.1| amino acid ABC transporter, permease protein [Streptococcus suis
           P1/7]
 gi|253755216|ref|YP_003028356.1| amino acid ABC transporter, permease protein [Streptococcus suis
           BM407]
 gi|145689825|gb|ABP90331.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|145692033|gb|ABP92538.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|223898651|gb|EEF65013.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|251816373|emb|CAZ52004.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis SC84]
 gi|251817680|emb|CAZ55428.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis BM407]
 gi|251820155|emb|CAR46493.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis P1/7]
 gi|292558667|gb|ADE31668.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus suis GZ1]
          Length = 219

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 47/73 (64%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T A +AEI+R GL A+  GQ EA ++ G T  +    +++PQA+R ++P + SQ 
Sbjct: 90  AFTIFTTAAMAEIIRGGLNAIGPGQTEAGLSQGFTPVQIMVYIIMPQAIRKMLPAIISQI 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 150 VTVIKDTSFLYSV 162


>gi|78355230|ref|YP_386679.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217635|gb|ABB36984.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 225

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 64/116 (55%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+ +E VR  L+++ +GQ++AA ALG++  K    +++PQA R  +P   ++ + L+K
Sbjct: 100 SGAYNSEYVRGALLSIRQGQIKAAQALGMSKFKTIFWIVIPQAFRRALPGCGNEVIYLIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            SSLA  +   +L      +  +T +  E  ++    YL+L  +    +++L  ++
Sbjct: 160 YSSLAYIITCIELTGEARAVATKTFRFTEAFMVVGMYYLALVTVATWILDKLEQRL 215


>gi|68249724|ref|YP_248836.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           86-028NP]
 gi|68057923|gb|AAX88176.1| arginine transport system permease protein [Haemophilus influenzae
           86-028NP]
          Length = 227

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 13/180 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYT 277
           LY++ F   G P LV    ++ L +  P  GQF +I  S     +S  +    +AL+  +
Sbjct: 51  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWIIDSPLWYVLSNAWFCAVLALALNS 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  ++    + A+P+GQ E+  ALGL+ R  T  +L+P A++  +P  +++ + + K 
Sbjct: 103 AAYSTQLFHGAVKAIPKGQWESCAALGLS-RLQTLKILIPYALKRALPSYSNEIILVFKG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 162 TALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLAFER 221


>gi|221218203|ref|YP_002524230.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides KD131]
 gi|221163230|gb|ACM04196.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides KD131]
          Length = 222

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 67/127 (52%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +AL+ + +AF  E  R+GL +V R   +A+ +LGL       LV+ P A+RS +P
Sbjct: 89  FWSGVLALTIWASAFHIESFRAGLASVGREMHDASASLGLRRLPHALLVVAPIALRSALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  +  +KNS+   A+G  +L  V    I Q  ++ E+ L    IYL + + ++   
Sbjct: 149 STLNTVVGTIKNSAYLQAIGLVELTFVAVDRIAQDFRSTEMFLSICVIYLVVILGVSALG 208

Query: 386 NRLNAKI 392
           +RL  ++
Sbjct: 209 HRLERRL 215


>gi|77404679|ref|YP_345253.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|77390329|gb|ABA81512.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 222

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 67/127 (52%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +AL+ + +AF  E  R+GL +V R   +A+ +LGL       LV+ P A+RS +P
Sbjct: 89  FWSGVLALTIWASAFHIESFRAGLASVGREMHDASASLGLRRLPHALLVVAPIALRSALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  +  +KNS+   A+G  +L  V    I Q  ++ E+ L    IYL + + ++   
Sbjct: 149 STLNTVVGTIKNSAYLQAIGLVELTFVAVDRIAQDFRSTEMFLSICVIYLVVILGVSALG 208

Query: 386 NRLNAKI 392
           +RL  ++
Sbjct: 209 HRLERRL 215


>gi|317047472|ref|YP_004115120.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949089|gb|ADU68564.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 239

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 7/167 (4%)

Query: 231 GLPTLVLIALKYQLHFDKP----VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           G+P L++I   Y  +F       ++GQ     G   +P F+   +A+   + ++  E+ R
Sbjct: 65  GIPELLVI---YLFYFGGSGLITLIGQMFGADGFIEAPPFLIGALAIGLISGSYQGEVYR 121

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +  +A+ +G++EAA+A+G+   +  + +LLPQ +R  +P +++ +   LK+S+L    G 
Sbjct: 122 AARLALAKGEIEAAVAIGMPRWRIAQRILLPQVVRYALPGMSNVWQMSLKDSALVSVTGI 181

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +L+         T       L+    YL L+++      R  +++ 
Sbjct: 182 VELMRASQIAAGSTRDYFTFYLVGGACYLVLTLLSNHAFRRAESRLG 228



 Score = 40.0 bits (92), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)

Query: 110 IGTLVGAG----RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           IG LVG+G    +LS  + + W+   Y  VFR IP L+VI+  Y
Sbjct: 33  IGALVGSGVAAAKLSTQRWLRWLGEAYSTVFRGIPELLVIYLFY 76


>gi|253689073|ref|YP_003018263.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755651|gb|ACT13727.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 221

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 9/106 (8%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  EI R+GL ++  GQ E A ALG+      R V+LPQ +R+++P LT++ + L K +S
Sbjct: 105 YCTEIFRAGLQSIDHGQWEGAKALGMRQAVILRRVVLPQVLRNMLPALTNRMIELAKVTS 164

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEI---------ILIWMFIYLS 376
           LA  +   +L+  G  + +   + +EI         ILIW   YL+
Sbjct: 165 LASILAVNELMYQGRLLSSTYYRPLEILTVVALLYFILIWPGSYLA 210


>gi|302024084|ref|ZP_07249295.1| amino acid ABC transporter, permease protein [Streptococcus suis
           05HAS68]
 gi|330832441|ref|YP_004401266.1| ABC-type amino acid transport system, permease [Streptococcus suis
           ST3]
 gi|329306664|gb|AEB81080.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis ST3]
          Length = 219

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 47/73 (64%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T A +AEI+R GL A+  GQ EA ++ G T  +    +++PQA+R ++P + SQ 
Sbjct: 90  AFTIFTTAAMAEIIRGGLNAIGPGQTEAGLSQGFTPVQIMVYIIMPQAIRKMLPAIISQI 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 150 VTVIKDTSFLYSV 162


>gi|312173031|emb|CBX81286.1| Histidine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 228

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 9/162 (5%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKP 249
           VF+ +LG++ +  A +LS   + +   A+  +Y  T LI G+P LVL+ L  Y L     
Sbjct: 25  VFAVLLGLIGA--AAKLS---NSRPLAAMSEVY--TTLIRGVPDLVLMLLIFYGLQIALN 77

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  F       + P    + I L     A+  E  R   +AVP+GQ+EAA A G T  +
Sbjct: 78  QLTDFFSFAQFDIDPMVAGI-ITLGFIYGAYFTETFRGAWMAVPKGQLEAATAFGFTRFQ 136

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
               +L P  MR  +P + + +  +LK ++L   +G  D+V 
Sbjct: 137 TFLRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVK 178


>gi|319761802|ref|YP_004125739.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330826338|ref|YP_004389641.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317116363|gb|ADU98851.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329311710|gb|AEB86125.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 229

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 43/72 (59%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E  R  ++A+PRGQMEAA A G+   +    + LPQ +R  +P  T+ +L L+K 
Sbjct: 105 GAYMTETFRGAILAIPRGQMEAAWAFGMGRLRTFVRITLPQMVRYALPSFTNNWLVLIKA 164

Query: 338 SSLAVAVGFADL 349
           ++L   +G  D+
Sbjct: 165 TALVSLIGLHDM 176



 Score = 36.6 bits (83), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 37/66 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y  AIL G + T  ++ + +  AT++G    A +LS  + + W+ ++Y  V R IP L+
Sbjct: 3   DYYLAILNGSLLTVGVSLASLAVATLLGLAGAAAKLSGRRPLVWLAQLYTTVVRGIPELL 62

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 63  MMLLVF 68


>gi|227114776|ref|ZP_03828432.1| histidine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 229

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYLAVPRGQIEAAVAFGFSPMKVFRRILFPSMMRFALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +  +LK ++L   +G  D++ 
Sbjct: 158 WQVILKATALVSLLGLNDVIK 178


>gi|156742154|ref|YP_001432283.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
 gi|156233482|gb|ABU58265.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
          Length = 224

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 63/108 (58%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++ L   +AA+ AE +RS L +V  GQM AA A+G++  +A   V+LPQA+R  +P  ++
Sbjct: 92  FLTLGLNSAAYQAEYLRSALQSVSEGQMVAARAIGMSKWQAIWSVVLPQALRLALPAWSN 151

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           + + +LK +S+   +   DL+     + ++    I+I LI    Y++L
Sbjct: 152 EAIAMLKYTSVVFLIAVPDLMGQAKILASRYFAPIQIYLIVAVFYIAL 199


>gi|237750083|ref|ZP_04580563.1| amino acid abc transporter [Helicobacter bilis ATCC 43879]
 gi|229374270|gb|EEO24661.1| amino acid abc transporter [Helicobacter bilis ATCC 43879]
          Length = 221

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 56/92 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A + ++VR+ ++ +P+ Q E+A+ALG +  +    +++PQA+++++P   + 
Sbjct: 92  IVFSMWGIAEMGDLVRASILNIPKHQRESALALGFSTWQIEYYIIIPQALKALMPSSINL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +  ++K +SL   +G  +L+ VG  +I   G+
Sbjct: 152 FGRIIKTTSLLPLIGVVELLKVGQQLIEVVGR 183


>gi|209547106|ref|YP_002279024.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538350|gb|ACI58284.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 240

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 66/125 (52%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L     A++ E++R  ++++P GQ+EAA A G+      R ++LP  + + +P   + +L
Sbjct: 113 LGFVQGAYMTEVLRGAILSIPAGQLEAAKAFGMRPTLRFRRIILPSLIPNALPGFANLWL 172

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +++K+S+L   VG+ +L        + T Q +   L    +YL+++I+  L  + L A  
Sbjct: 173 SVIKDSALIAVVGYQELALAARVAASNTKQYMLFFLAAAMLYLAITIISNLLFSALEAHF 232

Query: 393 ALKEK 397
              ++
Sbjct: 233 RRGQR 237


>gi|86360916|ref|YP_472803.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285018|gb|ABC94076.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 219

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 26/213 (12%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +A   V +F+ G+       RLSR F  +   AL   YI  F      T + + L
Sbjct: 21  LTVIGSALALVMAFLAGL------GRLSRFFAVR---ALATAYIEFFR----GTSIFVQL 67

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + ++F  P         G T++P   +  +AL     A+ AE+VR  + AV R Q EA 
Sbjct: 68  -FWVYFVLP-------FAGLTLTP-LQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+      +  QT
Sbjct: 119 IALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTDMTFQAQVVRAQT 178

Query: 361 GQAI----EIILIWMFIYLSLSIMIALFMNRLN 389
           G  +     I++++  +  ++S  + L   R+ 
Sbjct: 179 GNTLVPFAAILILYFLMASAISAAMRLLERRMT 211


>gi|315640503|ref|ZP_07895611.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483707|gb|EFU74195.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 547

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 68/129 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + ++IA     AA+ +E  R+ L++V + ++EAA ++GLT+ +    ++LP A+   
Sbjct: 415 PALVYVFIAFGLNEAAYTSETFRAALLSVNKNEIEAARSIGLTNVQTMMRIILPSALIVA 474

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L + +++LLK +SLA  V   D++     I     +  E  +    +Y  + ++I  
Sbjct: 475 LPNLVNSFISLLKATSLAFTVTIIDIMGQTRIIAGANLRFFEAYIAVALVYWVMCLLIEQ 534

Query: 384 FMNRLNAKI 392
              R+  K+
Sbjct: 535 VAKRIERKL 543


>gi|237740703|ref|ZP_04571184.1| amino acid ABC transporter [Fusobacterium sp. 2_1_31]
 gi|229422720|gb|EEO37767.1| amino acid ABC transporter [Fusobacterium sp. 2_1_31]
          Length = 240

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 30/184 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPT 234
           LT+       V S ++GI+ S       + F +      +  +  PLL    FL FGLP 
Sbjct: 40  LTLKIGGIGIVLSIIVGILGSWILYENFKFFKQIVIGYVELSRNTPLLVQLFFLYFGLPK 99

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +                       G  +SPE   + I L+    +++ E  RS L  + +
Sbjct: 100 V-----------------------GLRLSPELCGI-IGLTFLGGSYMIETFRSALETIDK 135

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q E+A++LG+T+ +  R V+LPQ+    +P LT+  + +LK +S+  A+   D++ V  
Sbjct: 136 IQKESALSLGMTNWQTMRYVILPQSFVISLPGLTANIIFMLKETSVFSAISLMDMMFVTK 195

Query: 355 TIIN 358
            +I 
Sbjct: 196 DLIG 199


>gi|206576837|ref|YP_002237301.1| histidine ABC transporter, permease protein HisQ [Klebsiella
           pneumoniae 342]
 gi|288934235|ref|YP_003438294.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290508438|ref|ZP_06547809.1| histidine transport system permease [Klebsiella sp. 1_1_55]
 gi|206565895|gb|ACI07671.1| histidine ABC transporter, permease protein HisQ [Klebsiella
           pneumoniae 342]
 gi|288888964|gb|ADC57282.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777832|gb|EFD85829.1| histidine transport system permease [Klebsiella sp. 1_1_55]
          Length = 228

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 13/170 (7%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+     LG   F     + P    + I L     A+
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNSVTDALGMAQF----DIDPMIAGI-ITLGFIYGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVP+G +EAA A G +  +  R +L P  MR  +P + + +  +LK ++L
Sbjct: 108 FTETFRGAYLAVPKGHIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATAL 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
              +G  D+V         T Q     ++   IYL   +LS  + L + R
Sbjct: 168 VSLLGLEDVVKATQLAGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLER 217



 Score = 36.6 bits (83), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            ++  IL G + T  LA S ++ A +IG L GAG +LS+N+ +A +   Y  + R +P L
Sbjct: 4   GFSQVILQGALVTLELALSSVVLAVLIG-LAGAGAKLSSNRPLALVFEGYTTLIRGVPDL 62

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V++  ++      L I  +S+    GM
Sbjct: 63  VLMLLIFYG----LQIALNSVTDALGM 85


>gi|329297449|ref|ZP_08254785.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Plautia stali symbiont]
          Length = 213

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 19/167 (11%)

Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLI-----ALKYQL 244
           S VL +VLSL     +LSR+      + L +++   T LI  +P LVL+      L+  L
Sbjct: 23  SVVLAVVLSLIGAGAKLSRN------RLLAMIFEGYTRLIRSVPDLVLMLLIFYGLQIAL 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +     LG   F     + P    + I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 77  NAVTDALGMAQF----DIDPMVAGI-ITLGFIYGAYFTETFRGAFLAVPKGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            T  +  R +L    MR  +P + + +  +LK ++L   +G  D+V 
Sbjct: 132 FTGSQTFRRILFQAMMRFALPGIGNNWQVILKATALVSLLGLEDVVK 178



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 2/67 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            Y+  IL G + T  LA S ++ A ++ +L+GAG +LS N+L+A I   Y  + R++P L
Sbjct: 4   GYSEIILKGTLVTLELALSSVVLAVVL-SLIGAGAKLSRNRLLAMIFEGYTRLIRSVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|298294125|ref|YP_003696064.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930636|gb|ADH91445.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 258

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    +AL+   AA++ E++R  L+AVP G +EA+ ALG++ R     V +P A+R  + 
Sbjct: 100 FGCAIVALALNHAAYMTEVLRGSLMAVPGGIVEASEALGISRRNVFIWVRMPLAIRYGLK 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI-----WMFIYLSLSIM 380
              ++ ++ +K +++   V   DL +V  TI  QT      IL      W F+ L + + 
Sbjct: 160 AYQNEVISFIKGTAIVSVVTITDLTAVANTIFEQTYDPFTPILCAAAFYWAFVNL-IRVG 218

Query: 381 IAL---FMNRLNAK 391
             L   ++NR NA+
Sbjct: 219 FTLWGRWLNRHNAE 232


>gi|227327249|ref|ZP_03831273.1| histidine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 229

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYLAVPRGQIEAAVAFGFSPMKVFRRILFPSMMRFALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +  +LK ++L   +G  D++ 
Sbjct: 158 WQVILKATALVSLLGLNDVIK 178


>gi|239833587|ref|ZP_04681915.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821650|gb|EEQ93219.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 284

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 61/124 (49%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   AA+  E++R     VP G+++A  A G++  K  R + LP+A+   +P L  + 
Sbjct: 159 ALTISFAAYEGEVMRGAFAGVPSGELQAGRAFGMSPWKVFRRIWLPRAIHRALPTLNGET 218

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  LK + L   +   D+  V   +  +T    E +L+   IY+ L+  + L   RL  +
Sbjct: 219 VLQLKATPLVATITVVDVYGVVSRVRQETYLTYEPLLLLALIYMILTAGLVLVFRRLENR 278

Query: 392 IALK 395
           I  +
Sbjct: 279 IPTR 282


>gi|227112258|ref|ZP_03825914.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 221

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 56/98 (57%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  EI R+GL ++  GQ E A ALG+      R V+LPQ +R+++P LT++ + L K +S
Sbjct: 105 YCTEIFRAGLQSIDHGQWEGAKALGMRQAVILRRVVLPQVLRNMLPALTNRMIELAKVTS 164

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           LA  +   +L+  G  + +   + +EI+ +   +Y  L
Sbjct: 165 LASILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVL 202


>gi|119026276|ref|YP_910121.1| hypothetical protein BAD_1258 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118765860|dbj|BAF40039.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 236

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 72/123 (58%), Gaps = 9/123 (7%)

Query: 224 ISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTA 278
           ++TF I G+P  V L+   Y + F    LG    IG    +P  +S +    +A++C   
Sbjct: 58  LNTF-IKGVPLAVQLLFCYYAVPFVAKWLGS---IGIYDFNPRHISYFPAAVVAIACNFG 113

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+I ++V S + AV RGQ+E+A ++G+T  +    V++PQA+   +P +T+ ++ LLK +
Sbjct: 114 AYITDVVVSSVKAVDRGQIESAQSVGMTGLQTALHVIVPQAVVISLPSMTNYFIWLLKGT 173

Query: 339 SLA 341
           SLA
Sbjct: 174 SLA 176


>gi|260495457|ref|ZP_05815583.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Fusobacterium sp. 3_1_33]
 gi|260196994|gb|EEW94515.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Fusobacterium sp. 3_1_33]
          Length = 219

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 28/141 (19%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    FL FGLP       K  L F   + G     F+GGS                 
Sbjct: 64  PLLVQLFFLYFGLP-------KVGLRFSPEICGIIGLTFLGGS----------------- 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT+  + LLK 
Sbjct: 100 --YMIETFRSALETIDKIQKESALSLGMTRWQTMRYVILPQSFVISLPGLTANIIFLLKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN 358
           +S+  A+   D++ V   +I 
Sbjct: 158 TSVFSAISLMDMMFVAKDLIG 178


>gi|332040837|gb|EGI77209.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 223

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 1/91 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SPE  S+ +A+     A+ AEI+R+G+ A PRGQ+EAA++L L   +    V+LP 
Sbjct: 87  GLRLSPEAASI-LAMVLNLGAYSAEIIRAGVQATPRGQIEAALSLALNRWQVYTRVVLPP 145

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A++ + P L SQ + ++  S++   +   +L
Sbjct: 146 ALKRVWPALVSQIIIVMLGSAVCGQISTEEL 176


>gi|323492515|ref|ZP_08097663.1| amino acid ABC transporter permease [Vibrio brasiliensis LMG 20546]
 gi|323313302|gb|EGA66418.1| amino acid ABC transporter permease [Vibrio brasiliensis LMG 20546]
          Length = 246

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F++  + +     A++AE  R  ++AV  G++EAA A G+    A R +LLPQ +R
Sbjct: 112 VSP-FVAGVLTIGFIFGAYMAETFRGAIMAVDSGELEAAKAYGMGPVLAFRRILLPQMIR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   + +L LLK ++L   +G  D+V +       T             Y++++I+ 
Sbjct: 171 HALPGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKMPFT-------FYMAVAIIF 223

Query: 382 ALFMNRLNAKIALKEKK 398
             F +     + L E+K
Sbjct: 224 LFFTSVSTGVLKLVERK 240


>gi|291460391|ref|ZP_06599781.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291416958|gb|EFE90677.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 208

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 11/145 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + LP L  IA  Y +L  + P+L Q  F+       G  +S     + + LS    A++ 
Sbjct: 33  YKLPILRRIASAYVELSRNTPLLVQLFFLYFGLPKLGIRMSSALCGV-VGLSFLGGAYMT 91

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+GL AV   Q EAA++LGLT  ++   V+ PQA+   +P L +  + L+K +S+  
Sbjct: 92  ESFRAGLEAVEGVQREAALSLGLTPLQSMGYVIFPQALALSVPSLVANVIFLIKETSVFS 151

Query: 343 AVGFADLVSVGGTIIN---QTGQAI 364
           A+  ADL+ V   +I    QT +A+
Sbjct: 152 AIALADLMYVAKDLIGLYYQTEEAL 176


>gi|326315080|ref|YP_004232752.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323371916|gb|ADX44185.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 241

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 24/150 (16%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L L               Q N         E+ +  +       A
Sbjct: 68  PFLVQLMFVFFGLPSLGL---------------QLN---------EWQACLLTTVVNLGA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EIVR+G+   PRGQ+EAA ALG+      R V+L  A++ + P L+SQ + ++  +S
Sbjct: 104 YLTEIVRAGIQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLGTS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   +   DL      I ++  +A E  ++
Sbjct: 164 VVSQIAAQDLTFAANFIQSRNFRAFETYIV 193


>gi|225573415|ref|ZP_03782170.1| hypothetical protein RUMHYD_01607 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039225|gb|EEG49471.1| hypothetical protein RUMHYD_01607 [Blautia hydrogenotrophica DSM
           10507]
          Length = 215

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 24/137 (17%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +PLL +  FL +GLP          +  D P +    F G            I+++  
Sbjct: 61  RNVPLLVVMFFLFYGLPL---------VGVDIPAV----FCG-----------VISITLN 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             AF+AEI+R  +  +PRG++EAA +LGL      R +  P A R+ IP L  Q   ++K
Sbjct: 97  EGAFVAEIIRGSIKNMPRGEVEAAKSLGLGRLTIIRRITFPLAFRASIPMLLGQSSIVIK 156

Query: 337 NSSLAVAVGFADLVSVG 353
           ++SL   +   DL   G
Sbjct: 157 DTSLFSMIMIMDLTRAG 173


>gi|222106268|ref|YP_002547059.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737447|gb|ACM38343.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 248

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 80/154 (51%), Gaps = 10/154 (6%)

Query: 233 PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSG 288
           PTLV      QL F   VL     N +GG+  +P   F  +   +  + AA  +E +R+G
Sbjct: 84  PTLV------QLMFSFLVLNTVVSNLVGGAQNNPLTPFFWVVAVVGLHVAALHSEAIRAG 137

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP   +EAA  +G +  +  R V +P A R+ +P + +  +NL+K +++  A+  ++
Sbjct: 138 IEAVPASTIEAARGIGFSQFQILRYVEVPLAFRASLPAIVNNLINLVKLTTVGNAIAVSE 197

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +      +  Q    IE++++ +  +  +++++A
Sbjct: 198 ITYASIMVWTQRDNVIELMIVILAFFSLINLVVA 231


>gi|222082604|ref|YP_002541969.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727283|gb|ACM30372.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 257

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 7/119 (5%)

Query: 233 PTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LVLI A  Y   F+  + G +         P+++   I L+   +A++AEI R  + +
Sbjct: 98  PHLVLIFATTYIFPFEIVIAGHY------LPFPDWLKAVIGLAIPASAYVAEITRGAIQS 151

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +   Q EAA  LG +  +A R ++LPQ  R  +PP  + + ++   ++LA  VG  +L+
Sbjct: 152 IATTQWEAAKGLGFSRLQALRWIILPQCARRSLPPWMNLFASITMGTALASLVGVHELL 210



 Score = 36.2 bits (82), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 7/76 (9%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF----- 146
           GF+    ++   M   T +G ++G   L+  K+V +    YV+VFRN P LV+IF     
Sbjct: 50  GFLMNILISLLAMAGGTTLGVILGILELAPLKIVRYPVVFYVQVFRNAPHLVLIFATTYI 109

Query: 147 FLYKSVLS--VLPIPD 160
           F ++ V++   LP PD
Sbjct: 110 FPFEIVIAGHYLPFPD 125


>gi|148655937|ref|YP_001276142.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus sp. RS-1]
 gi|148568047|gb|ABQ90192.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus sp. RS-1]
          Length = 216

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 1/133 (0%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP F +  +AL   + A+  EI R  L AV  GQM AA A+G++  +A + V+LPQA+R 
Sbjct: 84  SP-FWAGALALGFASGAYQTEIFRGALQAVQPGQMIAARAIGMSRLQAIQSVVLPQALRL 142

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P   ++   +LK+S+L  AVG  +++     +  +T +      + + +YL+L+++  
Sbjct: 143 ALPAWGNEATLVLKDSTLVFAVGVPEILRRAQQVSARTFEPFLAFGVALLLYLALTMITT 202

Query: 383 LFMNRLNAKIALK 395
             +  L  +  L+
Sbjct: 203 QALRWLERRYRLQ 215


>gi|227529348|ref|ZP_03959397.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350776|gb|EEJ41067.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 225

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 29/197 (14%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLH 245
           A  FV S V+GI++ L   R+S++   +    +   YIS F   G+P LV++ L Y  L+
Sbjct: 37  AICFVTSNVVGILIMLM--RISKY---RFLSGIARFYISFFR--GVPMLVVLFLTYFGLN 89

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                    +F    TV P             +AF+AE  RS L  V + Q ++A ALG+
Sbjct: 90  MAALPAAVLSF----TVVP-------------SAFLAEYYRSALKGVSQTQYDSAKALGM 132

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQA 363
           ++R     ++LPQA R ++P L +  L++ K++SLA  +  +++      +  +NQ    
Sbjct: 133 SYRIMMTYIILPQAFRIVLPSLGNVLLDMFKSTSLAAMITVSEMFMKAKVVAGVNQDYMT 192

Query: 364 --IEIILIWMFIYLSLS 378
             IEI +I+  +   LS
Sbjct: 193 IYIEIAIIYWIVCCVLS 209


>gi|329121397|ref|ZP_08250022.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Dialister micraerophilus DSM 19965]
 gi|327469687|gb|EGF15154.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Dialister micraerophilus DSM 19965]
          Length = 229

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 50/83 (60%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VRS + ++P  Q E+A ALG +  +  R +++PQA+  ++PP  + +  ++
Sbjct: 102 WGTAEMGDLVRSAVESIPENQYESAAALGFSKFQMYRFIIIPQAVGFLLPPAINLFTRII 161

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SL V +G  +++  G  +I 
Sbjct: 162 KTTSLVVMIGVVEVLKTGQQLIE 184


>gi|148828330|ref|YP_001293083.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           PittGG]
 gi|148719572|gb|ABR00700.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           PittGG]
          Length = 227

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 14/206 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   L+LF T L    ++   +A+ L Y++ F   G P LV    ++ L +  P  GQF 
Sbjct: 26  IAFCLALFLTFLLSMENKWVKRAVNL-YLTLFT--GTPLLV----QFFLIYAGP--GQFQ 76

Query: 256 FIGGS----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           +I  S     +S  +    +AL+  +AA+  ++    + A+P+GQ E+  ALGL +R  T
Sbjct: 77  WIIDSPLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVKAIPKGQWESCGALGL-NRIQT 135

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             +L+P A++  +P  +++ + + K ++LA  +   D++     +      AI I  I  
Sbjct: 136 LKILIPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAG 195

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            IYL ++ +  L + +L  K+   E+
Sbjct: 196 GIYLIITGIATLLLRKLEKKVLAFER 221


>gi|293395143|ref|ZP_06639429.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
 gi|291422320|gb|EFE95563.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
          Length = 228

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+     LG   F     + P    + I L     A+
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNGVTEALGVAQF----DIDPLSAGI-ITLGFIYGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVPRGQ+EAA A G +  +  R +L P  MR  +P + + +  +LK ++L
Sbjct: 108 FTETFRGAYMAVPRGQIEAATAFGFSGGQTFRRILFPAMMRFALPGIGNNWQVILKATAL 167

Query: 341 AVAVGFADLVS 351
              +G  D+V 
Sbjct: 168 VSILGLNDVVK 178



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA S ++ A +IG +   G+LS N+++A +   Y  + R +P L
Sbjct: 3   QGYSQLIFEGALVTLELALSSVLLAVVIGLIGAGGKLSHNRVIASVFGAYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|17546823|ref|NP_520225.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17429123|emb|CAD15811.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 248

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 24/150 (16%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L L               Q N         E+ +  +       A
Sbjct: 68  PFLIQLMFVFFGLPSLGL---------------QIN---------EWQAALLTTVVNLGA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EIVR+G+   PRGQ+EAA AL ++     R V+L  A++ + P L+SQ + ++  +S
Sbjct: 104 YITEIVRAGIQETPRGQLEAASALAMSRWTCFRHVVLRPALQKVWPALSSQIVIVMLGTS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   +   DL      I ++  +A E  L+
Sbjct: 164 VVSQIAAQDLTFAANFIQSRNFRAFETYLV 193


>gi|254421950|ref|ZP_05035668.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196189439|gb|EDX84403.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 240

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 36/195 (18%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKAL---------PLLYISTFLIFGLPTLVLIALKY 242
           F  V+GI+ SLF T  +R  +   G AL         P L    F+ FGLP L       
Sbjct: 50  FGLVIGIIGSLFRTSGNRLLN---GIALAYVEIIRNTPYLIQLFFIFFGLPAL------- 99

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                           G  +S E  ++ ++L+    A+  EIVR+G+ ++P+GQ+EA +A
Sbjct: 100 ----------------GLKLSAEQAAI-VSLAINFGAYSTEIVRAGVESIPKGQVEAGLA 142

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G       R +++P A+ +I   L  Q +  +  +S+   +   DL   G  +  +T +
Sbjct: 143 IGFNKLDVFRHIVIPPALANIYSSLVGQVILAVLFTSVVSQIAAEDLTYAGNYLDARTFR 202

Query: 363 AIEIILIWMFIYLSL 377
           + EI      +YL++
Sbjct: 203 SFEIYFTLAILYLAI 217


>gi|157151612|ref|YP_001449894.1| amino acid ABC transporter permease protein [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157076406|gb|ABV11089.1| amino acid ABC transporter permease protein [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 269

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 72/136 (52%), Gaps = 8/136 (5%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ +  R V++P A    
Sbjct: 122 PALVFAVVAFAFNEAAYASETIRAAILSVSEGEIEAARSLGMTNTQVYRRVIIPNAAVVA 181

Query: 324 IPPLTSQYLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            P L +  + L K +SLA + G    FA    +GG+      + I + L    +Y  ++I
Sbjct: 182 TPTLINSLIGLTKGTSLAFSAGVVEVFAQAQILGGSDYRYFERFISVAL----VYWVVNI 237

Query: 380 MIALFMNRLNAKIALK 395
           MI  F   +  K+A++
Sbjct: 238 MIEQFGRFIERKMAIQ 253


>gi|126740302|ref|ZP_01755991.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126718757|gb|EBA15470.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 258

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 6/169 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           +I G P L+ I L Y  +    +  QF +I  S + P     +     AL+   A +  E
Sbjct: 88  IIRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVTALTLSYAGYEGE 145

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R    +V +GQ+EAA + G+      R + LPQA+ +++P L  + +  LK + L   
Sbjct: 146 VMRGAFSSVAKGQLEAAKSFGMPRFTMFRRIWLPQAIGNVLPTLGGETILQLKATPLVAT 205

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   ++ SV   + + T    E +L+   +Y+ ++ +I L   R   ++
Sbjct: 206 ITVVEIYSVSSRVRSDTFIVYEPLLLLALVYMVIAGLIGLAFKRFENRL 254


>gi|21910934|ref|NP_665202.1| putative amino acid ABC transporter permease [Streptococcus
           pyogenes MGAS315]
 gi|28895376|ref|NP_801726.1| amino acid ABC transproter (permease protein) [Streptococcus
           pyogenes SSI-1]
 gi|21905141|gb|AAM80005.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28810622|dbj|BAC63559.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes SSI-1]
          Length = 267

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 10/185 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           P+  I    + G P LV + L Y     F K +  ++ F       P  +    A +   
Sbjct: 76  PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKCLNQKYGFDWNVNAIPASIFAITAFAFNE 135

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A    IP L +  + L K 
Sbjct: 136 AAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNATVVAIPTLINGLIGLTKG 195

Query: 338 SSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +SLA   G    FA    +GG+      + I + L    +Y S+SI++      +  K+A
Sbjct: 196 TSLAFNAGIVEMFAQAQILGGSDYRYFERYISVAL----VYWSISILMEQIGRLIENKMA 251

Query: 394 LKEKK 398
           +K  +
Sbjct: 252 IKAPE 256


>gi|310644683|ref|YP_003949442.1| polar amino acid uptake family abc transporter, permease protein
           [Paenibacillus polymyxa SC2]
 gi|309249634|gb|ADO59201.1| Polar amino acid uptake family ABC transporter, permease protein
           [Paenibacillus polymyxa SC2]
          Length = 238

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 15/213 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL------KYQLHF 246
           S +LG ++ L AT L R +       L  LY+S   I G P +V + L      K+  +F
Sbjct: 31  SMLLGAIIGL-ATALIRIYKVPVLAPLSTLYVSY--IRGTPLIVQLFLVYYGIPKFLYYF 87

Query: 247 DKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L QFN      + PE  +L ++ S     +++E  R+ + +V RGQ EAA ++G
Sbjct: 88  QNEYGFLQQFNV---YVIPPELFAL-LSFSLNLGGYLSETFRAAIHSVDRGQFEAANSIG 143

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    ++LPQA+   +P L +  ++ +K++S    +G  D++     +  +     
Sbjct: 144 MSQTQIMLKIVLPQALTVALPNLGNTLISTVKDTSFIFMIGVVDMMGQAKIMGARALAFF 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E+ +    IY  + I+I   +  L  +I + E+
Sbjct: 204 EVYVAVSLIYWLVCIIIERGLVVLEKRIRIYER 236


>gi|257440785|ref|ZP_05616540.1| amino acid ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
 gi|257196759|gb|EEU95043.1| amino acid ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
          Length = 212

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 49/80 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   A + +EI R G+ AVP+GQ EA   LG+T  +    V L Q ++ I+PP+ ++
Sbjct: 88  VAFAINYACYFSEIYRGGIEAVPKGQTEAGQVLGMTKTQIFFKVTLLQVVKRILPPMGNE 147

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            + L+K++SLA  +   +++
Sbjct: 148 IITLVKDTSLANTIANKEII 167


>gi|303249934|ref|ZP_07336136.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650997|gb|EFL81151.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 225

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 270 YIALSCYTAAFIAE---IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++ +  +T   IAE   +VR  L+++ + Q+E+A ALGL   +  + + LPQ  R ++P 
Sbjct: 93  WVCIWVFTLWGIAEMGDLVRGTLVSIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPR 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
             + +  ++K SSLA  +G  ++V VG  II 
Sbjct: 153 AINLFTRMVKTSSLAALIGVIEIVKVGQQIIE 184


>gi|227511852|ref|ZP_03941901.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227084942|gb|EEI20254.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
          Length = 253

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 71/121 (58%), Gaps = 4/121 (3%)

Query: 259 GSTVSP-EFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           G  V P     L IA+S Y+   AA ++E +RS   +V + Q +AA+++G+T   + R +
Sbjct: 87  GVNVKPGSLPHLVIAISAYSLNAAANLSETIRSAYHSVDKDQYQAALSVGMTPSLSMRRI 146

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQ + ++IP  ++ +L+L+K+++L   +G  ++++    I +   + +E  L  + +Y
Sbjct: 147 VIPQLIPNLIPNFSNFFLDLIKDTALVYNIGIIEIMAKSNIIASFGFKYLETYLDALLLY 206

Query: 375 L 375
           L
Sbjct: 207 L 207


>gi|322378588|ref|ZP_08053028.1| glutamine ABC transporter, permease protein [Helicobacter suis HS1]
 gi|321148996|gb|EFX43456.1| glutamine ABC transporter, permease protein [Helicobacter suis HS1]
          Length = 219

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 52/88 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS    A++AE    GL A+P+ Q EAA++LGL   ++   VLLPQ++   +P L + 
Sbjct: 93  IGLSFLGGAYMAESFLLGLKALPKVQTEAALSLGLNRLQSLYYVLLPQSLAISLPSLGAN 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            + LLK +S+  A+  AD++ V   +I 
Sbjct: 153 VIFLLKETSVVSAIALADVMFVAKDLIG 180


>gi|18313023|ref|NP_559690.1| glutamine transport system permease protein, putative [Pyrobaculum
           aerophilum str. IM2]
 gi|18160525|gb|AAL63872.1| glutamine transport system permease protein, putative [Pyrobaculum
           aerophilum str. IM2]
          Length = 229

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 12/164 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           + T   + + SF +G+ L      L R F  K    L   Y+  F   G P LV I + Y
Sbjct: 17  IPTTMSLALLSFAIGLALGSI-LLLVRFFLPKPLPWLASAYVEAFR--GTPLLVQIFIVY 73

Query: 243 QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                    G   ++ G  ++ + F +  IAL   +AA+ AEI RS + A+P  Q   A 
Sbjct: 74  --------FGVGGYLKGYGINIDPFTAGVIALGLNSAAYQAEIFRSAVQAIPVEQYLTAE 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           A   T  +  R ++LPQA+R  +P L ++ + L+K+SSL   +G
Sbjct: 126 AYAFTKTQTFRYIILPQALRIALPALMNELVLLIKDSSLVAVIG 169


>gi|307253360|ref|ZP_07535231.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859039|gb|EFM91081.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 222

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 3/92 (3%)

Query: 270 YIALSCYTAAFIAE---IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++ +  +T   IAE   +VR  L+++ + Q+E+A ALGL   +  + + LPQ  R ++P 
Sbjct: 90  WVCIWVFTLWGIAEMGDLVRGTLVSIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPR 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
             + +  ++K SSLA  +G  ++V VG  II 
Sbjct: 150 AINLFTRMVKTSSLAALIGVIEIVKVGQQIIE 181


>gi|253688087|ref|YP_003017277.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754665|gb|ACT12741.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 238

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFH--EKTGKA-------LPLLYISTFLIFGLPTLVL-IA 239
           V + VLG+VL+ LFA   +  +     TG A       LP + +  F+ FG   L++ +A
Sbjct: 19  VCALVLGLVLAMLFAVWETVRWKAVSWTGTAVVTLLRGLPEILVVLFIYFGSSQLLMMLA 78

Query: 240 LKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             + L+      PV  + + IG   +SP F+   IAL+   AA+ ++ +R  L AVP+GQ
Sbjct: 79  DGFTLNLFIVQIPV--KLD-IGMFEISP-FLCGVIALALLYAAYASQTLRGALKAVPQGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSKSAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T +     ++   IYL ++++    + R+  +    E++
Sbjct: 195 ATRTQEPFTWYVVAAAIYLIITLLSQYVLKRIELRTTRFERR 236


>gi|226944245|ref|YP_002799318.1| polar amino acid ABC transporter inner membrane permease
           [Azotobacter vinelandii DJ]
 gi|226719172|gb|ACO78343.1| polar amino acid ABC transporter, inner membrane permease component
           [Azotobacter vinelandii DJ]
          Length = 264

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 68/135 (50%), Gaps = 3/135 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ + + L+   +A +AE+ R  + ++P  Q EAA +LG    +  R ++LPQ  + +
Sbjct: 130 PDWLKVTLGLALPASANVAEVFRGAVASIPATQWEAARSLGFGRGQILRAIILPQCCKRM 189

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +PP  + Y  +   ++LA  VG  DL+    +    +N+ G  + I    + ++ +    
Sbjct: 190 LPPWMNLYAVITMGTALASLVGVHDLIDTAQIATNTVNRVGFTVLIYASVLGLFFAYCYP 249

Query: 381 IALFMNRLNAKIALK 395
           I+ F   L  + A +
Sbjct: 250 ISRFTRYLERRHAFQ 264


>gi|160901201|ref|YP_001566783.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160366785|gb|ABX38398.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 249

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 1/92 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + ++P F+ + I +S +   F AE +R+G+ AVP   +EAA +LG + R+    V LP
Sbjct: 109 GNNPLTP-FVWVVIVVSLHKGVFHAEALRAGIEAVPATTLEAARSLGFSQRQLLVRVQLP 167

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+R  +P LT+  ++L+K +++A A+   D+
Sbjct: 168 LAVRFALPSLTNNLVDLVKMTAVASAIAVGDV 199


>gi|116751317|ref|YP_848004.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116700381|gb|ABK19569.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 224

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 72/133 (54%), Gaps = 1/133 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +SP F++  +  S  + A+ +E +R  L+++ +GQM AA ALG +  +    V+LPQA+R
Sbjct: 85  LSP-FVASVLGFSLCSGAYHSEYIRGALLSIRKGQMLAAQALGFSKLRMVLSVILPQALR 143

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P   ++ + L+K SSLA  V   +L      + + + +   + L    +YL L  + 
Sbjct: 144 RALPGCGNEIIYLIKYSSLAYMVTCIELTGEAKILASHSFKYTIVFLSVGIVYLFLVSLA 203

Query: 382 ALFMNRLNAKIAL 394
           +  ++ +  K++L
Sbjct: 204 SWLLHHIEDKVSL 216


>gi|116254799|ref|YP_770635.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259447|emb|CAK10585.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 228

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 11/153 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV + L Y L    P +G  N        P  ++  I LS  TAA+ AE +R G  
Sbjct: 73  GVPLLVQLLLIYNLL---PAIG-INV-------PSIVAAIIGLSLCTAAYQAENLRGGFS 121

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP G +E+A  +G+T  +  R +  P A+R   P L ++ + +LK SSL   VG  +L 
Sbjct: 122 SVPAGLVESAEMVGMTPVQIFRRIKAPIALRLTFPALVNEAILILKASSLVSVVGVIELT 181

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            +   +   T   +EI      IYL ++ ++AL
Sbjct: 182 RMAQDLAGSTFLPLEIFASAGLIYLVINWIVAL 214


>gi|52144757|ref|YP_082071.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|51978226|gb|AAU19776.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
          Length = 221

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 28/178 (15%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +  PLL    FL FGLP+L    +K   +F   +L    F+GG              
Sbjct: 60  EVARNTPLLIQLFFLYFGLPSL---GIKLS-NFSIALLAM-CFLGG-------------- 100

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                 ++ E++RSGL ++ + Q+E+  A+GL   +  R ++LPQA     P L + ++ 
Sbjct: 101 -----GYMTEVIRSGLNSISKSQVESGYAIGLNKWQLFRFIILPQAATISAPALFANFIF 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI----WMFIYLSLSIMIALFMNR 387
           LLK +S+  A+   +L+     +I+   +  E++++    ++F+++ LS +++    R
Sbjct: 156 LLKETSIVSAIAVPELLYTTTNLISIYYKTSEMLIMLTASYIFLFVPLSFLLSWLERR 213


>gi|299068609|emb|CBJ39841.1| exported protein of unknown function [Ralstonia solanacearum CMR15]
          Length = 280

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 3/93 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  A+    AA+IA+ +++GL AV  GQ  AA+ALG++   A   V+LPQA R +
Sbjct: 30  PETATVVAAMG---AAYIAQSLQTGLRAVGAGQRHAALALGMSPGHALLAVVLPQAWRIM 86

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +P + +Q+++ +K++SLA  V   +L +    +
Sbjct: 87  LPSIANQWVSTVKDTSLAYIVSVVELSTAASEV 119


>gi|283455611|ref|YP_003360175.1| glutamine transport system permease glnP [Bifidobacterium dentium
           Bd1]
 gi|283102245|gb|ADB09351.1| glnP1 Glutamine transport system permease protein glnP
           [Bifidobacterium dentium Bd1]
          Length = 196

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P  Q E+A  LGL   +    V+LPQA+R ++P   +    ++
Sbjct: 72  WGGAELGDLVRGALESIPDAQYESAYVLGLGPWQTFTRVILPQALRRLLPASVNLATRIV 131

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 132 KTTSLAVLLGVVEVIKVGQQIID 154


>gi|269960967|ref|ZP_06175336.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269834186|gb|EEZ88276.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 225

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  +   DL 
Sbjct: 116 GLPKGEVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                + ++     E  L     Y++L+ +I
Sbjct: 176 GAARLVNSRYYAPFESFLTAGLFYMALTFII 206


>gi|126459641|ref|YP_001055919.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum calidifontis JCM 11548]
 gi|126249362|gb|ABO08453.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum calidifontis JCM 11548]
          Length = 232

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 10/171 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L + ++ + T   +   +F +GIVL      L+R F  K    +   Y+  F   G P 
Sbjct: 12  ALLYVSMGIPTTMSLAALAFSIGIVLGSLLL-LTRFFLPKPLPWIATAYVEAFR--GTPL 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   + ++F    +G +    G  + P F +  IAL   +AA+ AEI R+ + A+P 
Sbjct: 69  LVQI---FIIYFG---VGGYLKAYGINLDP-FTAGVIALGLNSAAYQAEIFRAAVQAIPV 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            Q   A A   T  +  R ++LPQA+R  +P L ++ + L+K+SSL   +G
Sbjct: 122 EQYLTAEAYAFTKAQTFRYIILPQALRIALPALMNELVLLIKDSSLVAVIG 172


>gi|307702258|ref|ZP_07639218.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus oralis ATCC 35037]
 gi|307624271|gb|EFO03248.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus oralis ATCC 35037]
          Length = 226

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 44/212 (20%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF++G+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 31  SFLVGLIVSVI-----RHYRVPIFSQLATAYIELSRNTPLLIQLFFLYFGLPRIGIV--- 82

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L  +        F+GGS                   ++AE  RSGL AV + Q E  +
Sbjct: 83  --LSSEVCATVGLIFLGGS-------------------YMAESFRSGLEAVSQTQHEIGL 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--- 358
           A+GLT  +  R V+ PQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    
Sbjct: 122 AIGLTSVQVFRYVVFPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYY 181

Query: 359 QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 182 ETDIALAMLVVAYLIMLLPISLVFSWIERRLR 213


>gi|222081571|ref|YP_002540935.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726250|gb|ACM29339.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 235

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 6/137 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP   ++ + LS Y   +++E++R   +AV RGQ +AA +LG + R+    V+ PQA+ 
Sbjct: 86  VSPNVAAM-LGLSLYHGGYLSEVLRPAYLAVERGQHDAADSLGYSFRQKLARVVGPQAVH 144

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEIILIWMFIYLSLSI 379
             +P   +  + L+ N +L + +G AD+++    ++ +       E  L+   IY  L +
Sbjct: 145 IALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMQRDYNQYQFETYLVLAVIYSLLCL 204

Query: 380 ---MIALFMNRLNAKIA 393
              ++  F  + N++ A
Sbjct: 205 VAWLVVRFFEKRNSRFA 221


>gi|120608917|ref|YP_968595.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120587381|gb|ABM30821.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 228

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 24/150 (16%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L L               Q N         E+ +  +       A
Sbjct: 68  PFLVQLMFVFFGLPSLGL---------------QLN---------EWQACLLTTVVNLGA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EIVR+G+   PRGQ+EAA ALG+      R V+L  A++ + P L+SQ + ++  +S
Sbjct: 104 YLTEIVRAGIQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLGTS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   +   DL      I ++  +A E  ++
Sbjct: 164 VVSQIAAQDLTFAANFIQSRNFRAFETYIV 193


>gi|160945458|ref|ZP_02092684.1| hypothetical protein FAEPRAM212_02982 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443189|gb|EDP20194.1| hypothetical protein FAEPRAM212_02982 [Faecalibacterium prausnitzii
           M21/2]
          Length = 215

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 49/80 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   A + +EI R G+ AVP+GQ EA   LG+T  +    V L Q ++ I+PP+ ++
Sbjct: 91  VAFAINYACYFSEIYRGGIEAVPKGQTEAGQVLGMTRTQIFFKVTLLQVVKRILPPMGNE 150

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            + L+K++SLA  +   +++
Sbjct: 151 IITLVKDTSLANTIANKEII 170


>gi|229817171|ref|ZP_04447453.1| hypothetical protein BIFANG_02430 [Bifidobacterium angulatum DSM
           20098]
 gi|229784960|gb|EEP21074.1| hypothetical protein BIFANG_02430 [Bifidobacterium angulatum DSM
           20098]
          Length = 224

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 51/83 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P  Q E+A  LGL++ +    V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALQSIPEIQSESAYVLGLSNWQGFVHVILPQALRRLLPASVNLATRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|189423783|ref|YP_001950960.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           lovleyi SZ]
 gi|189420042|gb|ACD94440.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           lovleyi SZ]
          Length = 755

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 3/130 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA      A+ AEI R+G+  V +GQ EA I+LG T       ++LPQ +R I+P    +
Sbjct: 622 IAFGMNFGAYTAEIFRTGIEGVEKGQTEAGISLGFTRTSTFLHIVLPQMVRRILPVYKGE 681

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY--LSLSIMIAL-FMNR 387
           +++L+K +S+   +   DL      I ++T  A   +++   +Y  +S ++M +L ++ R
Sbjct: 682 FISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFFPLVMVAILYFLISWTLMQSLEYLER 741

Query: 388 LNAKIALKEK 397
           +      K K
Sbjct: 742 ITDPKYKKRK 751


>gi|260459412|ref|ZP_05807667.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259034966|gb|EEW36222.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 273

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 16/165 (9%)

Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKP 249
           S VLG VLS+     R+SR+    +G    L Y   +   G P LV   L  Y L   +P
Sbjct: 73  SMVLGAVLSMPVAYGRMSRN-RILSG----LAYCYVYFFRGTPLLVQTFLVYYGLGSFRP 127

Query: 250 VL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            L   G ++F         F     A S  TAA+ AEI+R  + +VPRGQ E A +LGL 
Sbjct: 128 ELQMVGLWDFF-----KDAFNCGVFAFSLNTAAYQAEILRGAIESVPRGQWEGAASLGLH 182

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
             +  R ++LPQA+   + P  ++ + ++K S++   +   DL+ 
Sbjct: 183 KLQTLRKIVLPQALIVALRPYGNELILMVKASAIVAIITVYDLMG 227



 Score = 36.2 bits (82), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 35/74 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA A L G   T  L    M+   ++   V  GR+S N++++ +   YV  FR  P LV
Sbjct: 54  KYAPAYLRGLGVTLSLVAISMVLGAVLSMPVAYGRMSRNRILSGLAYCYVYFFRGTPLLV 113

Query: 144 VIFFLYKSVLSVLP 157
             F +Y  + S  P
Sbjct: 114 QTFLVYYGLGSFRP 127


>gi|254464498|ref|ZP_05077909.1| polar amino acid uptake family ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
 gi|206685406|gb|EDZ45888.1| polar amino acid uptake family ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
          Length = 248

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 7/159 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG+V+ LF     + +  K  +   LL I T +I  +P LVLI + Y +  D  ++ 
Sbjct: 40  AFGLGLVIGLFGA-YGKLYGGKVTR--DLLAIYTTVIRAVPELVLILILYYVGSD--IIN 94

Query: 253 QFN-FIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + +  +GG  V    ++  I  L     A+  E++R  + AVP GQ+EAA + G+     
Sbjct: 95  KISEAMGGGRVEINGVAAGIWVLGVVQGAYATEVLRGAIKAVPVGQIEAAKSYGMPAFMT 154

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            R V +P  M   +P L + +L   K+++L   VGF +L
Sbjct: 155 MRRVTIPAMMSFAVPGLANLWLIATKDTALLAVVGFNEL 193


>gi|227873563|ref|ZP_03991805.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Oribacterium sinus F0268]
 gi|227840587|gb|EEJ50975.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Oribacterium sinus F0268]
          Length = 245

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 84/168 (50%), Gaps = 17/168 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S  LGI+  LF  R      +   + +  LY++   I  +P LVL+ L Y   F    
Sbjct: 54  LLSLPLGILFGLFMRR-----KDPISRGISQLYLAFIRI--MPPLVLLFLVY---FGTAR 103

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F+  G +       S  +  + +  A + ++VR+ + ++P+ Q E+  +LGL+  + 
Sbjct: 104 IAGFHLSGEA-------SGILVFTLWGTAEMGDLVRAAIGSIPKHQKESGRSLGLSSWQI 156

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            R +++PQ +R +IP   +    ++K +SL V +G  +++  G  II+
Sbjct: 157 YRYIIIPQTVRRLIPLSINLITRMIKTTSLIVLIGVVEVLKTGQQIID 204


>gi|288962582|ref|YP_003452877.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288914848|dbj|BAI76333.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 224

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 5/122 (4%)

Query: 233 PTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRS 287
           P  +L+    +L  + P L Q  F F G  ++     E+ +  +A+     A+  EI+R+
Sbjct: 52  PLAILVGAYVELIRNTPFLVQLFFIFFGLPSLGIRLAEWQAAVLAMVINLGAYSTEIIRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A P+GQ+EA   LG+T  +  R V+L  AM  I P LTSQ + ++  SS+   +   
Sbjct: 112 GIEATPKGQIEAGAGLGMTGPQIFRYVVLGPAMGKIWPALTSQIVIVMLGSSVCSQIAAE 171

Query: 348 DL 349
           +L
Sbjct: 172 EL 173


>gi|218672025|ref|ZP_03521694.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli GR56]
          Length = 238

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 17/141 (12%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKP--------VLGQFNFIGGSTVSPEFMSL 269
           AL  +Y + F   G+P L++I   Y ++F            +G   F+G     P F + 
Sbjct: 53  ALGNVYTTVFR--GVPELLII---YLIYFGGSSAVTSIGKAMGYEGFLG----LPSFAAG 103

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +A+   + A+ AE+ R   +A+ +G++EAA A+G+      R +++PQ +R  IP L +
Sbjct: 104 ALAVGIISGAYQAEVFRGAFLAISKGELEAASAIGMHRGMRFRRIIIPQVLRFAIPGLGN 163

Query: 330 QYLNLLKNSSLAVAVGFADLV 350
            +   LK+S+L    G A+L+
Sbjct: 164 VWQLSLKDSALISVTGLAELM 184



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 13/73 (17%)

Query: 90  LVGFVNTFWLAF-------------SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           L+GF +T W A              + +    ++G +V   +LS N     +  VY  VF
Sbjct: 3   LLGFGSTGWGALLIFAALMTLAVTATALAIGAVLGAIVAGAKLSGNPFFVALGNVYTTVF 62

Query: 137 RNIPPLVVIFFLY 149
           R +P L++I+ +Y
Sbjct: 63  RGVPELLIIYLIY 75


>gi|311695924|gb|ADP98797.1| amino acid ABC transporter, inner membrane subunit [marine
           bacterium HP15]
          Length = 240

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 1/128 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+  EI+R  +I+ P G++EAA A G+      R ++LP A R  +   +++
Sbjct: 110 LAFTLNTAAYTTEIIRGAIISTPNGEIEAAKAYGMNWFMRMRRIVLPSAARRAVQAYSNE 169

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  S++A  V   DL      I ++     +  +     Y++L+ ++     +L  
Sbjct: 170 VIFMLHASAIASVVTIVDLTGAARNIYSRFYAPFDAFIFVALCYMALTFILVFAFRKLET 229

Query: 391 KIALKEKK 398
            + LK ++
Sbjct: 230 HL-LKHQR 236


>gi|317180216|dbj|BAJ58002.1| amino acid ABC transporter permease [Helicobacter pylori F32]
          Length = 240

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 93/188 (49%), Gaps = 17/188 (9%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++    +     +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 47  IISFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 101

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 102 GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 154 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 213

Query: 367 ILIWMFIY 374
            L    IY
Sbjct: 214 YLEAALIY 221


>gi|294085012|ref|YP_003551772.1| polar amino acid uptake family ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664587|gb|ADE39688.1| polar amino acid uptake family ABC transporter, permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 296

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 4/136 (2%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P++M     LS    A I+EIVR  + +VP  Q EA+ +L  + ++    ++LPQ  + +
Sbjct: 160 PDWMKAVFGLSLPIMANISEIVRGAVQSVPTAQWEASESLAFSRQQTLWRIILPQCFKRM 219

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM--- 380
           IPP  + Y  L   + L   +G  +++++    +       E+++ +    L L  +   
Sbjct: 220 IPPWMNWYAILTMATPLCSLLGVEEIITLSRQAMEAENNHPELLVPFYSFALGLFFIYCY 279

Query: 381 -IALFMNRLNAKIALK 395
            IA F  RL  K A+K
Sbjct: 280 PIARFTMRLERKYAVK 295


>gi|239502916|ref|ZP_04662226.1| ABC-type arginine transport system, permease component
           [Acinetobacter baumannii AB900]
          Length = 229

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VPRGQ+EAA+A G+   +    VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMKPWQVFHRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKI 180


>gi|152996346|ref|YP_001341181.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Marinomonas
           sp. MWYL1]
 gi|150837270|gb|ABR71246.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Marinomonas sp. MWYL1]
          Length = 225

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 102/203 (50%), Gaps = 22/203 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI--FGLPTLVLIALKYQLHFDK 248
           + + V+G+V +L     SR            L IST+ I  F   T +L+    Q+ F  
Sbjct: 34  ILAIVMGLVFALLRRSKSRT-----------LCISTYWIVEFVRSTPLLV----QIFFLY 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            V+ +F    G ++SP    ++ AL  +  A+++E+ RSG+  + +GQ EAA AL LT  
Sbjct: 79  YVMPEF----GVSMSPLATGVF-ALGLHYGAYLSEVFRSGIDGIEKGQWEAARALNLTII 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              + ++LPQA+R +IP   +  + + K +    A+   +++ +   I ++  + +E   
Sbjct: 134 DTYKDIVLPQAIRPMIPATGNYIIAMFKETPQLSAITLLEMLQMAKIIGSENFRYLEPFT 193

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           +   +YL  S++ A  ++++  +
Sbjct: 194 LVGILYLVFSLLAAYGIHQVERR 216


>gi|118590989|ref|ZP_01548389.1| putative transport system permease abc transporter protein [Stappia
           aggregata IAM 12614]
 gi|118436511|gb|EAV43152.1| putative transport system permease abc transporter protein [Stappia
           aggregata IAM 12614]
          Length = 271

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 61/123 (49%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           + AL    AA+  E++R     VPRG++EAA A G+      R + LP+A    +P L+ 
Sbjct: 144 FTALMLSFAAYEGEVMRGAFAGVPRGELEAARAFGMGRFTMFRRIWLPRAFYRALPTLSG 203

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +  LK++ L   +   D+ ++   +   T    E +L+   IY+ L+ ++ L    L 
Sbjct: 204 ETVLQLKSTPLVATITVVDVYAIISRVRQDTYLTYEPLLLLALIYMCLTGILVLLFRFLE 263

Query: 390 AKI 392
            +I
Sbjct: 264 NRI 266


>gi|152978297|ref|YP_001343926.1| arginine transporter permease subunit ArtM [Actinobacillus
           succinogenes 130Z]
 gi|150840020|gb|ABR73991.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 228

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + V+   ++L  T L    + K  ++   ++I+ F   G P LV    ++ L +  P 
Sbjct: 21  VVALVVAFFMALLCTFL-LSMNNKIAQSAVKMFITLFT--GTPLLV----QFFLIYAGP- 72

Query: 251 LGQFNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            GQF +I  S +    S  +    +AL+  +AA+  ++    + A+P+GQ E+  ALGL+
Sbjct: 73  -GQFQWIVNSPLWSLLSNAWFCAMLALALNSAAYSTQLFHGAVKAIPKGQWESCAALGLS 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R  T  +L+P A++  +P  +++ + + K +SLA  +   D++     +      A+ I
Sbjct: 132 -RLQTLKILIPYALKRALPSYSNEIILVFKGTSLASTITILDIMGYARQLYGTEYDALTI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I   IYL ++ +  L + +L  ++   E+
Sbjct: 191 YGIAGVIYLVITGIATLLLRKLEKRVLAFER 221


>gi|329997346|ref|ZP_08302729.1| arginine/ornithine transport protein [Klebsiella sp. MS 92-3]
 gi|328539095|gb|EGF65131.1| arginine/ornithine transport protein [Klebsiella sp. MS 92-3]
          Length = 235

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+     LG   F     + P    + I L     A+
Sbjct: 60  TTLIRGVPDLVLMLLIFYGLQIALNSVTDALGMAQF----DIDPMIAGI-ITLGFIYGAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVP+G +EAA A G +  +  R +L P  MR  +P + + +  +LK ++L
Sbjct: 115 FTETFRGAYLAVPKGHIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATAL 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
              +G  D+V         T Q     ++   IYL
Sbjct: 175 VSLLGLEDVVKATQLAGKSTWQPFYFAIVCGLIYL 209



 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            ++  IL G + T  LA S ++ A +IG L GAG +LS+N+ +A +   Y  + R +P L
Sbjct: 11  GFSQVILQGALVTLELALSSVVLAVLIG-LAGAGAKLSSNRPLALVFEGYTTLIRGVPDL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V++  ++      L I  +S+    GM
Sbjct: 70  VLMLLIFYG----LQIALNSVTDALGM 92


>gi|238753776|ref|ZP_04615137.1| Histidine transport system permease protein hisM [Yersinia ruckeri
           ATCC 29473]
 gi|238708012|gb|EEQ00369.1| Histidine transport system permease protein hisM [Yersinia ruckeri
           ATCC 29473]
          Length = 237

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 106 LALTLNTCAYTTEIFAGAIRAVPSGEVEAANAYGFSRFKLYRCIILPSALRIALPAYSNE 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 166 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFVLISLF 220


>gi|152971236|ref|YP_001336345.1| histidine and lysine/arginine/ornithine transport system ABC
           transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238895827|ref|YP_002920563.1| histidine transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|150956085|gb|ABR78115.1| histidine and lysine/arginine/ornithine transport system (ABC
           superfamily, membrane) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238548145|dbj|BAH64496.1| histidine transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 228

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T LI G+P LVL+      L+  L+     LG   F     + P    + I L     A+
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNSVTDALGMAQF----DIDPMIAGI-ITLGFIYGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  R   +AVP+G +EAA A G +  +  R +L P  MR  +P + + +  +LK ++L
Sbjct: 108 FTETFRGAYLAVPKGHIEAATAFGFSGGQTFRRILFPAMMRYALPGIGNNWQVILKATAL 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
              +G  D+V         T Q     ++   IYL
Sbjct: 168 VSLLGLEDVVKATQLAGKSTWQPFYFAIVCGLIYL 202



 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            ++  IL G + T  LA S ++ A +IG L GAG +LS+N+ +A +   Y  + R +P L
Sbjct: 4   GFSQVILQGALVTLELALSSVVLAVLIG-LAGAGAKLSSNRPLALVFEGYTTLIRGVPDL 62

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V++  ++      L I  +S+    GM
Sbjct: 63  VLMLLIFYG----LQIALNSVTDALGM 85


>gi|306826917|ref|ZP_07460217.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|304430935|gb|EFM33944.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 267

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 10/185 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           P+  I    + G P LV + L Y     F K +  ++ F       P  +    A +   
Sbjct: 76  PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKCLNQKYGFDWNVNAIPASIFAITAFAFNE 135

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A    IP L +  + L K 
Sbjct: 136 AAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNATVVAIPTLINGLIGLTKG 195

Query: 338 SSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +SLA   G    FA    +GG+      + I + L    +Y S+SI++      +  K+A
Sbjct: 196 TSLAFNAGIVEMFAQAQILGGSDYRYFERYISVAL----VYWSISILMEQVGRLIENKMA 251

Query: 394 LKEKK 398
           +K  +
Sbjct: 252 IKAPE 256


>gi|237745209|ref|ZP_04575690.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
 gi|229432438|gb|EEO42650.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
          Length = 219

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 28/141 (19%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYT 277
           PLL    FL FGLP       K  L F   + G     F+GGS                 
Sbjct: 64  PLLVQLFFLYFGLP-------KVGLRFSPEICGIIGLTFLGGS----------------- 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT+  + LLK 
Sbjct: 100 --YMIETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFLLKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN 358
           +S+  A+   D++ V   +I 
Sbjct: 158 TSVFSAISLMDMMFVAKDLIG 178


>gi|209547105|ref|YP_002279023.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538349|gb|ACI58283.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 229

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+  EI+R  L+AVPRG++EAA A G+      R + LP+A+R  +P    +
Sbjct: 104 VALTLNFAAYQGEILRGTLLAVPRGELEAAKAAGMRPGMVLRRIWLPRAIRIGLPTFAGE 163

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  LK + +  +V   DL      I   T    E +++    Y++L+ +I     R   
Sbjct: 164 VILQLKATPIVFSVTVMDLYGAAYKIRQDTLLVYEPLIVVAAFYVALTFVITQVFQRFEN 223

Query: 391 KIALKE 396
            +  + 
Sbjct: 224 AVPTRR 229


>gi|56708861|ref|YP_164902.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56680546|gb|AAV97211.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 262

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAE 283
           LI G P L+ I L Y  +    V  Q + I  S + P     +    +AL+   A +  E
Sbjct: 89  LIRGTPLLLQIWLLY--YGLGSVFPQIDGIRDSVLWPYLRQAWPYALLALTLSFAGYEGE 146

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R     V RGQ+EAA + G+      R + LPQA+ +++P L  + +  LK + L   
Sbjct: 147 VMRGAFSGVNRGQLEAARSFGMPRFTLFRRIWLPQAINNVLPTLGGETILQLKATPLVAT 206

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   ++ +V   +   T    E +L+   +Y+ ++ +IAL    L  ++  + 
Sbjct: 207 ITVVEIFAVSSRVRQDTFVIYEPLLLLALVYMVIAGLIALAFRWLENRVPTRR 259


>gi|291616875|ref|YP_003519617.1| ArtQ [Pantoea ananatis LMG 20103]
 gi|291151905|gb|ADD76489.1| ArtQ [Pantoea ananatis LMG 20103]
          Length = 238

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 92/182 (50%), Gaps = 2/182 (1%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           + LP + +  F+ FG   L+L ++  + L+F    L     I    VSP F+   IAL+ 
Sbjct: 55  RGLPEILVVLFIYFGASQLLLTLSDGFTLNFGLFRLPVQMHIENFDVSP-FLCGVIALAM 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+L LL
Sbjct: 114 LYAAYASQTLRGALKAVPIGQWESGQALGMKKSAIFFRLIMPQMWRHALPGLGNQWLVLL 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+++L   +   DL+    +I  +T +     L+   IYL++++     + R+  +    
Sbjct: 174 KDTALVSLISVNDLMLQTKSIATRTQEPFTWFLVAAAIYLAITLFSQAVLRRIELRTTRF 233

Query: 396 EK 397
           E+
Sbjct: 234 ER 235


>gi|171741000|ref|ZP_02916807.1| hypothetical protein BIFDEN_00062 [Bifidobacterium dentium ATCC
           27678]
 gi|306823351|ref|ZP_07456726.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309802751|ref|ZP_07696855.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171276614|gb|EDT44275.1| hypothetical protein BIFDEN_00062 [Bifidobacterium dentium ATCC
           27678]
 gi|304553058|gb|EFM40970.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308220815|gb|EFO77123.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 224

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 49/83 (59%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P  Q E+A  LGL   +    V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALESIPDAQYESAYVLGLGPWQTFTRVILPQALRRLLPASVNLATRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|172064622|ref|YP_001812272.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171998107|gb|ACB69023.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 246

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 15/167 (8%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG---------STVSPEFMSLYIALSCY 276
           T+ I G P L  + L Y         GQF ++           S +   F    IAL+  
Sbjct: 57  TWFIRGTPLLAQLMLVYY------GFGQFQWVQDAWQRGNPLLSVLRDPFGCAMIALTVN 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+  EI+   + A   G++EAA A G++   A R ++LP A+R  +P  +++ + +L 
Sbjct: 111 TCAYTVEILAGAIRATAYGEIEAAQAYGMSRATAWRRIVLPSALRRFLPAYSNEVILMLH 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            +SL  A+   DL      +        E  +    +Y +L+ ++AL
Sbjct: 171 GTSLVSAITLIDLTGAARDVYANYYAPFEAFISVGTVYFALTGLVAL 217


>gi|163748031|ref|ZP_02155353.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
 gi|161378691|gb|EDQ03138.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
          Length = 244

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  + A+  EI+R G++ V RG++EAA A+G+T  +  R V  P A R   P L ++
Sbjct: 102 LAFALNSTAYQTEILRGGIMGVARGEIEAAKAIGMTRLQILRRVTFPHAYRIAWPALGNE 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K S+LA  V   D++     I ++T     I L    IYL ++ +  L   +   
Sbjct: 162 IILLMKASALASVVTVFDIMGRTRQIFSRTFD-FSIYLWAALIYLCITAIFVLLWRQGET 220

Query: 391 KIA 393
           +++
Sbjct: 221 RLS 223


>gi|54309893|ref|YP_130913.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium profundum SS9]
 gi|46914332|emb|CAG21111.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium profundum SS9]
          Length = 225

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 1/83 (1%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ +EI+R  + ++P+G++EAA A G++   A R ++LP AMR  +P  +++ + ++ 
Sbjct: 102 TAAYTSEIIRGAINSLPKGEIEAAKAYGMSTPLAFRRIILPSAMRRALPAYSNEVIFMVH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
            S++A  V   DL      I+N 
Sbjct: 162 GSAVAGIVTIVDLTG-AARIVNS 183


>gi|242239985|ref|YP_002988166.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132042|gb|ACS86344.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 229

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVPRGQ+EAA+A G +  K  R ++ P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYLAVPRGQIEAAVAFGFSPMKVFRRIMFPSMMRFALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +  +LK ++L   +G +D++ 
Sbjct: 158 WQVILKATALVSLLGLSDVIK 178


>gi|239818199|ref|YP_002947109.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239804776|gb|ACS21843.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 222

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + +EI R G+ ++P GQ E A ALG+   +  R V+LPQ ++ ++P  T++ + L KN+S
Sbjct: 105 YCSEIFRGGIASLPAGQWEGARALGMRRVQVLRRVVLPQVLKRMLPAFTNRGIELAKNTS 164

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +A  +   +L+  G  +     + +EI+     +Y  L    A   +RL  ++AL+ 
Sbjct: 165 IASVIAVHELMYQGRALSAAYYRPLEILTAVAVVYFVLIYPGAYAASRLEKRLALRS 221


>gi|146312498|ref|YP_001177572.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145319374|gb|ABP61521.1| L-histidine ABC transporter membrane protein / L-lysine ABC
           transporter membrane protein / L-ornithine ABC
           transporter membrane protein / L-arginine ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 237

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EA  A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPYGEIEAGRAYGFSSVKLYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|261820774|ref|YP_003258880.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261604787|gb|ACX87273.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 229

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYLAVPRGQIEAAVAFGFSPLKVFRRILFPSMMRFALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +  +LK ++L   +G  D++ 
Sbjct: 158 WQVILKATALVSLLGLNDVIK 178


>gi|300309585|ref|YP_003773677.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300072370|gb|ADJ61769.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 227

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 34/184 (18%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTG--------KALPLLYISTFLIFGLPTLVLIALKY 242
           +  FVLG   ++   R SRH   +          +  PLL    FLIFGL ++ +     
Sbjct: 33  LLGFVLGAACAV--ARGSRHGWLRAAVSGYVELIRNTPLLIQCYFLIFGLSSVGV----- 85

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P++       G+T         +AL     A+  EIVR+GL ++  GQ+EAA  
Sbjct: 86  ----TMPIMA------GAT---------LALVINIGAYSCEIVRAGLESIHHGQLEAASC 126

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+  +    V+L  A+  + P LTSQ++ ++  SS+  +VG  +L+ V   + + T +
Sbjct: 127 LGLSPAQVFWHVVLLPAVERVWPALTSQFVLMMLASSILSSVGAEELLGVANRVQSDTFR 186

Query: 363 AIEI 366
             E+
Sbjct: 187 NFEV 190


>gi|307248742|ref|ZP_07530755.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307250983|ref|ZP_07532909.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306854669|gb|EFM86859.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306857011|gb|EFM89141.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 222

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 48/84 (57%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++
Sbjct: 99  WGVAEMGDLVRGALASIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPGAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQ 359
           K SSLA  +G  ++V VG  II  
Sbjct: 159 KTSSLAALIGVIEMVKVGQQIIEN 182


>gi|227112027|ref|ZP_03825683.1| arginine transporter permease subunit ArtQ [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 238

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFH--EKTGKA-------LPLLYISTFLIFGLPTLVL-IA 239
           V + VLG+VL+ LFA   +  +     TG A       LP + +  F+ FG   L++ +A
Sbjct: 19  VCALVLGLVLAMLFAVWETVRWKAVSWTGTAVVTLLRGLPEILVVLFIYFGSSQLLMMLA 78

Query: 240 LKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             + L+      PV  + + IG   +SP F+   IAL+   AA+ ++ +R  L AVP+GQ
Sbjct: 79  DGFTLNLFIVQIPV--KLD-IGMFEISP-FLCGVIALALLYAAYASQTLRGALKAVPQGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSKAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T +     ++   IYL ++++    + R+  +    E++
Sbjct: 195 ATRTQEPFTWYVVAAAIYLIITLLSQYVLKRIELRTTRFERR 236


>gi|50121593|ref|YP_050760.1| arginine transporter permease subunit ArtQ [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612119|emb|CAG75569.1| arginine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 238

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 1/142 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           IG   +SP F+   IAL+   AA+ ++ +R  L AVP+GQ E+  ALGL+       +++
Sbjct: 96  IGMFEISP-FLCGVIALALLYAAYASQTLRGALKAVPQGQWESGQALGLSKSAIFFRLIM 154

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ  R  +P L +Q+L LLK+++L   +   DL+    +I  +T +     ++   IYL 
Sbjct: 155 PQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVVAAAIYLV 214

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           ++++    + R+  +    E++
Sbjct: 215 ITLLSQYVLKRIELRTTRFERR 236


>gi|16519952|ref|NP_444072.1| probable amino-acid ABC transporter permease y4tF [Sinorhizobium
           fredii NGR234]
 gi|2501399|sp|P55660|Y4TF_RHISN RecName: Full=Probable amino-acid ABC transporter permease protein
           y4tF
 gi|2182636|gb|AAB91859.1| probable amino-acid ABC transporter permease y4tF [Sinorhizobium
           fredii NGR234]
          Length = 238

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 85/176 (48%), Gaps = 7/176 (3%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K   +LYI  F      T +L+ L + L F  P+ G  + +G        ++  +ALS  
Sbjct: 62  KGFSILYIEIFR----GTSLLVQL-FWLFFALPIAG--DMMGIDLRLSPVVAGVLALSLN 114

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ AEIVR  + AV   Q EAA AL  +  +A   V LPQA+  ++P  ++  +  LK
Sbjct: 115 LGAYGAEIVRGAIQAVSPSQYEAATALNFSSSQALWRVALPQAIPEMMPSFSNLAIAALK 174

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++SL   +   DL      + N    +  +  + + +Y  ++++++ FM  + + +
Sbjct: 175 DTSLVSLITLHDLTFAAEQLRNFYQDSTTVYTMVLLMYFGIALVLSFFMRLIESSV 230


>gi|302062405|ref|ZP_07253946.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
          Length = 167

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 67/115 (58%), Gaps = 7/115 (6%)

Query: 237 LIALKYQLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           L+ +  +L  + P+L Q  FI       G  VS  F S  IA++    A++ EI+R+G+ 
Sbjct: 54  LVPVYVELARNTPLLIQLFFIYFALPTMGIRVS-GFASAVIAMTFLGGAYLTEILRAGIE 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++  A G
Sbjct: 113 AVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAGG 167


>gi|254779537|ref|YP_003057643.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
 gi|254001449|emb|CAX29449.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
          Length = 229

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLG----IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG    I+++L      +HF  K   A    Y+S  +I G P LV I + +   +
Sbjct: 36  IISFILGLFIAIMVALIKIAPPKHFMHKALLAGVNFYVS--IIRGTPLLVQIVVVF---Y 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 91  GLPALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 143 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++     R+ 
Sbjct: 203 YLEAALIYWLFCLVLEAVQKRVE 225


>gi|114770264|ref|ZP_01447802.1| putative glutamine ABC transporter permease protein [alpha
           proteobacterium HTCC2255]
 gi|114549101|gb|EAU51984.1| putative glutamine ABC transporter permease protein [alpha
           proteobacterium HTCC2255]
          Length = 277

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 52/84 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A++AEI R+G+ +V   Q  AA++LGL+ R+  R V+LPQA+R+++P   + 
Sbjct: 152 LALILTYSAYVAEIFRAGIDSVHPSQRSAALSLGLSERQVMRDVILPQAVRNVVPSQMNM 211

Query: 331 YLNLLKNSSLAVAVGFADLVSVGG 354
            + L K+ SL   +G  ++    G
Sbjct: 212 LIALQKDVSLLSFIGPVEIFRQAG 235


>gi|322386911|ref|ZP_08060535.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269193|gb|EFX52129.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 278

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 37/174 (21%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       IA + 
Sbjct: 95  RGTPLLVQLMLTYFGIPLLLKAINQKYGTAFN------INAIPASVFA------IIAFAF 142

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+R+    V++P A     P L +  + L 
Sbjct: 143 NEAAYASETIRAAILSVDPGEIEAARSLGMTNRQVYLRVIIPNAAVVATPTLINSLIGLT 202

Query: 336 KNSSLAVAVG----FADLVSVGGT--------------------IINQTGQAIE 365
           K +SLA + G    FA   ++GG+                    +I Q G+AIE
Sbjct: 203 KGTSLAFSAGVVEVFAKAQAIGGSDYRYFERFISVSIIYWIVNIVIEQIGRAIE 256


>gi|307262180|ref|ZP_07543831.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868157|gb|EFM99982.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 222

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 48/84 (57%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++
Sbjct: 99  WGVAEMGDLVRGALASIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPGAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQ 359
           K SSLA  +G  ++V VG  II  
Sbjct: 159 KTSSLAALIGVIEMVKVGQQIIEN 182


>gi|303253106|ref|ZP_07339255.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302647788|gb|EFL77995.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
          Length = 225

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 48/83 (57%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++
Sbjct: 102 WGVAEMGDLVRGALASIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPGAINLFTRMV 161

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K SSLA  +G  ++V VG  II 
Sbjct: 162 KTSSLAALIGVIEMVKVGQQIIE 184


>gi|12831455|gb|AAK08610.1| GtpC [Agrobacterium tumefaciens]
          Length = 222

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  IAL+ + +AF  E  R+GL AV RG  +A+ +LGL        ++LP A R+ +P
Sbjct: 89  FWSGVIALTAWASAFQIENFRAGLAAVDRGMQDASASLGLKRWHYGVFIVLPLAARAALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE----IILIWMFIYLSLSIMI 381
              +  +  +KNS+   A+G  +L  V    I    +AIE    I +I++    + S + 
Sbjct: 149 SSMNTIVATIKNSAYLQAIGLVELTFVAVDRIAYDFRAIEMFASICVIYLLCVFTASGVG 208

Query: 382 ALFMNRLN 389
           ++   RLN
Sbjct: 209 SMVERRLN 216


>gi|311106205|ref|YP_003979058.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 7 [Achromobacter
           xylosoxidans A8]
 gi|310760894|gb|ADP16343.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 7
           [Achromobacter xylosoxidans A8]
          Length = 245

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GGS ++P F  + I ++ +   F AE +R+G+ AVP   MEAA +L  + R+    V LP
Sbjct: 105 GGSPIAP-FAWVVIVVALHKGVFHAEALRAGIEAVPAVTMEAARSLAFSRRQILTQVQLP 163

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+R  +P L +  ++L+K +++A A+   D+
Sbjct: 164 LALRFALPALVNNLVDLVKMTAIASAIAVGDV 195


>gi|170736177|ref|YP_001777437.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169818365|gb|ACA92947.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 229

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L     A+  E  R   ++VPRGQ+EA  A G++  +    +L PQ MR  +P
Sbjct: 94  FAAGVVTLGFIYGAYFTETFRGAFLSVPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            + + +  L+K ++L   +G AD+V 
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVK 179


>gi|86153923|ref|ZP_01072126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842884|gb|EAQ60096.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 218

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   V++PQAMR + P   + 
Sbjct: 92  IVFSIWGCFEMMDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  L   I L+  
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSR 211

Query: 387 RLNAK 391
           +L  K
Sbjct: 212 KLEKK 216


>gi|169796308|ref|YP_001714101.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|169149235|emb|CAM87117.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
          Length = 224

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 30/176 (17%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 39  VGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFTCG 94

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 95  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLQPTQ 134

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E
Sbjct: 135 IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTE 190


>gi|320174663|gb|EFW49796.1| Histidine ABC transporter, permease protein HisM [Shigella
           dysenteriae CDC 74-1112]
          Length = 238

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LGLTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|315586883|gb|ADU41264.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Helicobacter pylori 35A]
 gi|317178711|dbj|BAJ56499.1| amino acid ABC transporter permease [Helicobacter pylori F30]
          Length = 240

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 17/201 (8%)

Query: 193 SFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           SF+LG+ +++    +     +HF  K        Y+S  LI G P LV I + +   +  
Sbjct: 49  SFILGLFIAVLVALIKIAPPKHFIHKALLTGVNFYVS--LIRGTPLLVQIVVVF---YGL 103

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL + 
Sbjct: 104 PTLGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLNYL 155

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I L
Sbjct: 156 QTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPIYL 215

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
               IY    +++ +   R+ 
Sbjct: 216 EAALIYWLFCLVLEVIQKRVE 236


>gi|262282196|ref|ZP_06059965.1| amino acid ABC transporter permease [Streptococcus sp. 2_1_36FAA]
 gi|262262650|gb|EEY81347.1| amino acid ABC transporter permease [Streptococcus sp. 2_1_36FAA]
          Length = 269

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 70/129 (54%), Gaps = 8/129 (6%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ +  R V++P A     P L + 
Sbjct: 129 VAFAFNEAAYASETIRAAILSVSEGEIEAARSLGMTNAQVYRRVIIPNAAVVATPTLINS 188

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K +SLA + G    FA    +GG+      + I + L    +Y  ++IMI  F  
Sbjct: 189 LIGLTKGTSLAFSAGVVEVFAQAQILGGSDYRYFERFISVAL----VYWVVNIMIEQFGR 244

Query: 387 RLNAKIALK 395
            +  K+A++
Sbjct: 245 FIERKMAIQ 253


>gi|183602355|ref|ZP_02963721.1| permease of ABC transporter system for amino acids [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683330|ref|YP_002469713.1| permease of ABC transporter system for amino acids [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241191291|ref|YP_002968685.1| amino acid ABC transporter permease [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241196697|ref|YP_002970252.1| amino acid ABC transporter permease [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|183218274|gb|EDT88919.1| permease of ABC transporter system for amino acids [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219620980|gb|ACL29137.1| permease of ABC transporter system for amino acids [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240249683|gb|ACS46623.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240251251|gb|ACS48190.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|295794284|gb|ADG33819.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 224

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 52/83 (62%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P+ Q E +  LGL++ +A   V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALQSIPQIQYETSYMLGLSNWQAFVHVILPQAVRRLLPGAVNLSTRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|28869817|ref|NP_792436.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853062|gb|AAO56131.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 244

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 71/136 (52%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G +     F  + I +S +  AF AE +R+G+ AVP   +EAA +L  + R+    V L
Sbjct: 102 VGAANPLTPFAWVVIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFSSRQLLWNVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q+   +E++++ +  +  
Sbjct: 162 PLAVRFALPSLVNNLIDLVKMTAVASAIAVNDITYASIMIWTQSDNVLELMILLLSFFAV 221

Query: 377 LSIMIALFMNRLNAKI 392
           LS  +      L A++
Sbjct: 222 LSFAVNCAGRALEARL 237


>gi|306822262|ref|ZP_07455643.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|304554424|gb|EFM42330.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
          Length = 234

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           ++ P+L     + +G+P +  +     LH D  +    N      + P  +++ +  S Y
Sbjct: 63  RSTPILVQLYVVCYGMPRITAL-----LHHDPKLAANVN------IYPNTVAI-VTFSLY 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            + +  EI R     V  GQ EA  +L L    A   +++PQA  + +P L++  +++LK
Sbjct: 111 ASVYFCEIFRGAYYTVDEGQREAIRSLNLPPLHALLRIVVPQAAINAVPNLSNSVIDMLK 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI-ALF 384
           N+SL   +   D+++    I +++ + IEI      +YL ++I++ ALF
Sbjct: 171 NTSLLYTISVMDIMARATIIGSESFKFIEIYTDAFIVYLGIAIVLFALF 219


>gi|300693528|ref|YP_003749501.1| amino acid ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
 gi|299075565|emb|CBJ34858.1| Amino acid ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
          Length = 227

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 3/100 (3%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ + +AL+   +A +AEI R  ++++P  Q EAA +L    R+    ++LPQ +R +
Sbjct: 93  PDWLKVTLALALPASAHVAEIFRGAVLSIPSTQWEAAASLAFGRREILWRIVLPQCVRRM 152

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQT 360
           +P   + Y  +   ++LA  VG  DL+    +    +N+T
Sbjct: 153 LPSWMNLYAVITMGTALASLVGVHDLLDTAQIASNTVNRT 192


>gi|238922609|ref|YP_002936122.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Eubacterium
           rectale ATCC 33656]
 gi|238874281|gb|ACR73988.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Eubacterium
           rectale ATCC 33656]
          Length = 252

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 1/121 (0%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G   ++P F  + + +   T A++ E VR+G+ ++  GQ E A A+G++  K    V+L
Sbjct: 102 MGYENLTPVFAGILVTV-LNTGAYMGETVRAGIGSIDMGQREGAWAMGMSPFKTMLYVVL 160

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA ++IIP + + +L  LK +S+   +   +L     T+     +  E  L+   IY  
Sbjct: 161 PQAFKNIIPEMANTFLLNLKMTSVLNVIAVQELFMAAKTVGGNYYKYFESYLVIAVIYFV 220

Query: 377 L 377
           L
Sbjct: 221 L 221


>gi|307255601|ref|ZP_07537406.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307260052|ref|ZP_07541764.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861450|gb|EFM93439.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306865888|gb|EFM97764.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 222

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 48/84 (57%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++
Sbjct: 99  WGVAEMGDLVRGALASIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPGAINLFTRMV 158

Query: 336 KNSSLAVAVGFADLVSVGGTIINQ 359
           K SSLA  +G  ++V VG  II  
Sbjct: 159 KTSSLAALIGVIEMVKVGQQIIEN 182


>gi|293365031|ref|ZP_06611748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|291316481|gb|EFE56917.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
          Length = 231

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 4/116 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  RSGL AV + Q E  +A+GLT  +  R V+ PQA    +P  ++  + L+K 
Sbjct: 103 GSYMAESFRSGLEAVSQTQHEIGLAIGLTSVQVFRYVVFPQATAVALPSFSANVIFLIKE 162

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +S+  AV  ADL+ V   +I    +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 163 TSVFSAVALADLMYVAKDLIGLYYETDIALAMLVVAYLIMLLPISLVFSWIERRLR 218


>gi|57237522|ref|YP_178536.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni RM1221]
 gi|86148955|ref|ZP_01067187.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|218562123|ref|YP_002343902.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|57166326|gb|AAW35105.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni RM1221]
 gi|85840313|gb|EAQ57570.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|112359829|emb|CAL34616.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284925735|gb|ADC28087.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|315057888|gb|ADT72217.1| Amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni S3]
 gi|315928203|gb|EFV07520.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929760|gb|EFV08930.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 218

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   V++PQAMR + P   + 
Sbjct: 92  IVFSIWGCFEMMDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  L   I L+  
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSR 211

Query: 387 RLNAK 391
           +L  K
Sbjct: 212 KLEKK 216


>gi|148925847|ref|ZP_01809534.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145844833|gb|EDK21937.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 224

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   V++PQAMR + P   + 
Sbjct: 98  IVFSIWGCFEMMDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNL 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  L   I L+  
Sbjct: 158 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSR 217

Query: 387 RLNAK 391
           +L  K
Sbjct: 218 KLEKK 222


>gi|213156956|ref|YP_002319001.1| ABC-type amino acid transport system [Acinetobacter baumannii
           AB0057]
 gi|215483767|ref|YP_002325992.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|294837739|ref|ZP_06782422.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           6013113]
 gi|294859374|ref|ZP_06797143.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           6013150]
 gi|301510864|ref|ZP_07236101.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii AB058]
 gi|301596926|ref|ZP_07241934.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii AB059]
 gi|213056116|gb|ACJ41018.1| ABC-type amino acid transport system [Acinetobacter baumannii
           AB0057]
 gi|213988347|gb|ACJ58646.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
          Length = 219

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 30/176 (17%)

Query: 196 LGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R       F+ +  +  PLL    FL +GLP L    +K    F   
Sbjct: 34  VGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFTCG 89

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+G   F+GGS                   ++AE  R+GL +V +GQ+++A ++GL   +
Sbjct: 90  VIG-LTFLGGS-------------------YMAEAFRAGLQSVAKGQIDSAKSIGLQPTQ 129

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E
Sbjct: 130 IFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTE 185


>gi|190894164|ref|YP_001984458.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190699825|gb|ACE93908.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 240

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 9/165 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +F  S   G +L L    L R+   K+  +    Y  T +I G+P L++I L Y   F  
Sbjct: 37  VFALSCAFGTLLGLLIAVL-RNSTRKSVSSCMRAY--TGIIRGVPELLIILLTY---FGG 90

Query: 249 PVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             L   + I G  +    F +   AL+   + + AEI R  + AV  GQ EAA ALGL++
Sbjct: 91  TAL--LSAIAGGYIEINAFAAGVAALTVVFSGYAAEIFRGAINAVAPGQREAAAALGLSN 148

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +   L+++PQ +   +P   +  ++L+K++SL   VG  D++ V
Sbjct: 149 SQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLISVVGLTDVMRV 193


>gi|289177407|gb|ADC84653.1| GlnP [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 230

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 52/83 (62%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P+ Q E +  LGL++ +A   V+LPQA+R ++P   +    ++
Sbjct: 106 WGGAELGDLVRGALQSIPQIQYETSYMLGLSNWQAFVHVILPQAVRRLLPGAVNLSTRIV 165

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 166 KTTSLAVLLGVVEVIKVGQQIID 188


>gi|262068033|ref|ZP_06027645.1| amino acid ABC transporter, permease protein [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378255|gb|EFE85773.1| amino acid ABC transporter, permease protein [Fusobacterium
           periodonticum ATCC 33693]
          Length = 219

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 7/156 (4%)

Query: 243 QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +L  + P+L Q  F+       G   SPE   + I L+    +++ E  RS L  + + Q
Sbjct: 58  ELSRNTPLLVQLFFLYYGLPKIGIKFSPELCGI-IGLTFLGGSYMIETFRSALETIDKIQ 116

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+A++LG+T  +  R V+LPQ+    +P LT+  + +LK +S+  A+   D++ V   +
Sbjct: 117 KESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFMLKETSVFSAISLIDMMFVTKDL 176

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I    +  E + + +  YL + + ++LF   L  K+
Sbjct: 177 IGLYYKTEESLFMLVVGYLIILLPLSLFGVWLERKL 212


>gi|260662200|ref|ZP_05863096.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
 gi|260553583|gb|EEX26475.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
          Length = 235

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 55/93 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  + A S    A ++E +RS   AV  GQ EAA+A+G+T  +A   +++PQ + ++
Sbjct: 97  PALVIAFTAFSLNAMANLSESIRSAYHAVDYGQYEAAVAVGMTPLRAMIQIVVPQLIANL 156

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           IP  T+ +L+L+K+++L   +G  +++     I
Sbjct: 157 IPNFTNIFLDLIKDTALVYNIGIVEIMGEANII 189


>gi|288960221|ref|YP_003450561.1| ABC transporter permease protein [Azospirillum sp. B510]
 gi|288912529|dbj|BAI74017.1| ABC transporter permease protein [Azospirillum sp. B510]
          Length = 221

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI R G+ +VP GQ EA  ALG+   +  R ++LP A+R ++P  T++ + L KN+S
Sbjct: 104 YYAEIYRGGIQSVPAGQWEAGRALGMGRVRLLRRIILPLAVRRMVPAFTNRAVELAKNTS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           +A  +   +L+       +Q    +E   +   IY  L
Sbjct: 164 VASIITVHELMYTARLFSSQNYIPMETFTVVAMIYFLL 201


>gi|330829214|ref|YP_004392166.1| histidine/lysine/arginine/ornithine ABC transporter permease
           [Aeromonas veronii B565]
 gi|328804350|gb|AEB49549.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           component [Aeromonas veronii B565]
          Length = 257

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 26/160 (16%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL---------GQFN-FIGGSTVSPEFMSL---YIA 272
           T +I G+P LVL+ L   L F   VL           +N ++  S  + E++SL   YI 
Sbjct: 66  TTIIRGIPDLVLMML---LFFGGQVLINGICTWVNETYNSWLLESNPNQEWVSLLPDYID 122

Query: 273 LSCYTA----------AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +S + A          A++ E  R  ++AV +G++EAA A G+   +    +L PQ MR 
Sbjct: 123 ISPFVAGVATIGFIFGAYMTETFRGAILAVDKGELEAARAFGMRATQVFVRILFPQMMRH 182

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            +P   + +L LLK ++L   +G  D+V         T Q
Sbjct: 183 ALPGFGNNWLVLLKTTALVSIIGLDDMVRKASLAAGSTQQ 222


>gi|296160737|ref|ZP_06843551.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295889040|gb|EFG68844.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 220

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 24/199 (12%)

Query: 182 TMDTNAKIFVFSFVLGI---VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           T+ T A   V   ++G    VL LF  R  R            +YI  F   G P LV +
Sbjct: 23  TLGTWAAGVVIGMLIGFLIAVLQLFCGRWVRGILR--------VYIELFR--GTPFLVQL 72

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              + L++  P  G        T+ P    + + L  Y +A+ AE  RSG  +VP G +E
Sbjct: 73  ---FLLYYGGPSFGL-------TLEPMTAGV-LGLGLYGSAYFAEAFRSGFQSVPPGHLE 121

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA  LGLT  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I +
Sbjct: 122 AASCLGLTRWQAVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGS 181

Query: 359 QTGQAIEIILIWMFIYLSL 377
            T   +E +L+    YL+L
Sbjct: 182 ATFAFVETLLVLCVCYLAL 200



 Score = 37.0 bits (84), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T     +G++   +IG L+   +L   + V  I RVY+E+FR  P LV +F L
Sbjct: 16  IAAGLATTLGTWAAGVVIGMLIGFLIAVLQLFCGRWVRGILRVYIELFRGTPFLVQLFLL 75

Query: 149 Y 149
           Y
Sbjct: 76  Y 76


>gi|296110572|ref|YP_003620953.1| ABC transporter amino acid permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832103|gb|ADG39984.1| ABC transporter amino acid permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 222

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            TVSP+ + ++ AL    AA++AE  RS + +V  GQ EAA AL +   +    VL PQA
Sbjct: 86  KTVSPQTIIIF-ALGFKYAAYMAETFRSAIHSVDYGQQEAAKALHIKQSQYVLRVLWPQA 144

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             + +P + +  + +LK +SL   +G +++   G  +   + + +E+ +    IY +L +
Sbjct: 145 AVNALPTVGNYIIGILKETSLVFVIGVSEMFGEGKLLAGASFKYLEVYVAVGLIYWALVV 204


>gi|295699311|ref|YP_003607204.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438524|gb|ADG17693.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 220

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 11/150 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G P LV +   + L++  P +G        T+ P    + + L  Y +A+ AE  RS
Sbjct: 62  LLRGTPFLVQL---FLLYYGGPSIGL-------TLEPMTAGI-VGLGLYGSAYFAEAFRS 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G  +VP+G +EAA  LGLT  +A   +  PQ +  I+P LT+  + L K +++   V   
Sbjct: 111 GFQSVPKGHLEAASCLGLTRWQAIVRIQAPQMLVLIVPALTNLIIVLSKETAVLSIVTVP 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           +L  V   I + T   +E +L+    YL+L
Sbjct: 171 ELTFVLTGIGSATFAFVETLLVLCVCYLAL 200


>gi|212704549|ref|ZP_03312677.1| hypothetical protein DESPIG_02609 [Desulfovibrio piger ATCC 29098]
 gi|212671948|gb|EEB32431.1| hypothetical protein DESPIG_02609 [Desulfovibrio piger ATCC 29098]
          Length = 223

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 57/92 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +E +R  L+++ +GQ++AA ALG+T  +    +++PQA R  +P   ++ + L+K
Sbjct: 100 SAAYHSEYIRGALLSIRQGQIKAAQALGMTTFQTVFWIVIPQAARRALPGCGNEIIYLIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            SSLA+ V   +L+S    + + T +  E+ L
Sbjct: 160 YSSLAMLVTCNELMSEAKVLASDTFRNTEVFL 191


>gi|283832261|ref|ZP_06352002.1| histidine transport system permease protein HisQ [Citrobacter
           youngae ATCC 29220]
 gi|291071903|gb|EFE10012.1| histidine transport system permease protein HisQ [Citrobacter
           youngae ATCC 29220]
          Length = 228

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 11/162 (6%)

Query: 193 SFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALK-YQLHFDK 248
           S VL +++ L   A +LS+       +AL L++ + T LI G+P LVL+ L  Y L    
Sbjct: 23  SVVLAVLIGLVGAAAKLSQS------RALGLIFEAYTTLIRGVPDLVLMLLIFYGLQIAL 76

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             +     I    + P    + I L     A+  E  R   +AVP+G +EAA A G T  
Sbjct: 77  NAVTDAMGISQIDIDPMVAGI-ITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTSS 135

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 136 QIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVV 177


>gi|257461203|ref|ZP_05626301.1| SugE protein [Campylobacter gracilis RM3268]
 gi|257441577|gb|EEV16722.1| SugE protein [Campylobacter gracilis RM3268]
          Length = 218

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 47/76 (61%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++VR  ++++P+ Q E+A AL  +  +    V+LP AMR ++P   + +  ++K +S+AV
Sbjct: 103 DLVRGAVLSIPKHQFESAEALAFSRSQIYLYVILPLAMRRLVPATINLFSRMIKTTSIAV 162

Query: 343 AVGFADLVSVGGTIIN 358
            +G  +LV VG  II 
Sbjct: 163 LIGVIELVKVGQQIIE 178


>gi|261821246|ref|YP_003259352.1| arginine transporter permease subunit ArtQ [Pectobacterium wasabiae
           WPP163]
 gi|261605259|gb|ACX87745.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 238

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 191 VFSFVLGIVLS-LFATRLSRHFH--EKTGKA-------LPLLYISTFLIFGLPTLVL-IA 239
           V + VLG+VL+ LFA   +  +     TG A       LP + +  F+ FG   L++ +A
Sbjct: 19  VCALVLGLVLAMLFAVWETVRWKAVSWTGTAVVTLLRGLPEILVVLFIYFGSSQLLMMLA 78

Query: 240 LKYQLHF---DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             + L+      PV  + + IG   +SP F+   IAL+   AA+ ++ +R  L AVP+GQ
Sbjct: 79  DGFTLNLLIVQIPV--KLD-IGMFEISP-FLCGVIALALLYAAYASQTLRGALKAVPQGQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 135 WESGQALGLSKAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T +     ++   IYL ++++    + R++      E++
Sbjct: 195 ATRTQEPFTWYVVAAAIYLVITLLSQYVLKRIDLHTTRFERR 236


>gi|327194082|gb|EGE60956.1| ABC transporter, membrane spanning protein [Rhizobium etli
           CNPAF512]
          Length = 240

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 51/84 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++    L     A++ E++R  ++A+P GQ+EAA A G+      R ++LP  M + +P
Sbjct: 106 FLAAVAVLGIVQGAYVTEVLRGAILAIPVGQIEAASAFGMGPWLRFRRIVLPALMPNALP 165

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
            LT+ ++++ K+S+L   VG+ +L
Sbjct: 166 GLTNLWMSVTKDSALIAVVGYQEL 189


>gi|118474262|ref|YP_892320.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413488|gb|ABK81908.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 220

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 7/124 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  YT++ ++EI+R GL ++P+GQ EAA + G         ++ PQ ++   P + SQ
Sbjct: 94  IGLFLYTSSVMSEIIRGGLNSIPKGQFEAAASQGFGFFYTLYKIIFPQTIKKATPAILSQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI-------WMFIYLSLSIMIAL 383
            +  +K++S    +G  +L +    I+    +   I+ +       +  +  SLSI++  
Sbjct: 154 VITTVKDTSFMAGLGVYELTNQSKLILASLKEFSHILAVIGLVAAMYFIVCFSLSIIVRY 213

Query: 384 FMNR 387
           +  R
Sbjct: 214 YNTR 217



 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF-- 146
           +L G   T  +AF   + + I G+++   R   NK +  I   YVE++RN P L+ ++  
Sbjct: 13  LLYGLSLTLIMAFFAAVGSIIFGSILAVMRNYGNKFIRGIAGAYVEIYRNTPLLLWMYAG 72

Query: 147 -FLYKSVLSVLPIPDHSIVLPFGMFL 171
            F+  ++ S L    ++++   G+FL
Sbjct: 73  CFVLPTIFSFLQGFSYAVLGTIGLFL 98


>gi|50121972|ref|YP_051139.1| histidine ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612498|emb|CAG75948.1| histidine ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 229

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYLAVPRGQIEAAVAFGFSPIKVFRRILFPSMMRFALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
           +  +LK ++L   +G  D++ 
Sbjct: 158 WQVILKATALVSLLGLNDVIK 178


>gi|319782219|ref|YP_004141695.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168107|gb|ADV11645.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 219

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 62/123 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     A+ AE+VR  + ++ R Q EA  AL L   +  R ++LPQA+  ++P   + 
Sbjct: 89  LALGLNVGAYAAEVVRGAIQSIGREQYEACTALNLGRWQGMRHIILPQALLVMLPTFGNN 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +++   +   DL      +  QTG  +      + IY  L+++I+  +  L  
Sbjct: 149 AIELLKATAVVSLISLTDLTFQAQVVRAQTGNTLVPFTTILIIYFILALLISWGVRSLER 208

Query: 391 KIA 393
           ++A
Sbjct: 209 RMA 211



 Score = 36.2 bits (82), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 33/70 (47%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           T  S Y   IL G + T  L   G + A I+  L G GR+S    + W+   Y+E FR  
Sbjct: 2   TQWSGYFGLILQGALVTIELTLMGSVLALIMAFLAGMGRVSRFFALRWLATAYIEFFRGT 61

Query: 140 PPLVVIFFLY 149
              V +F+ Y
Sbjct: 62  SIFVQLFWAY 71


>gi|255280681|ref|ZP_05345236.1| amino acid ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
 gi|255268618|gb|EET61823.1| amino acid ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
          Length = 218

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 1/122 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   A + + I R G+  VP GQ EA   LG+T  +    V L Q ++ I+PP++++
Sbjct: 94  VAFTINYACYFSVIFRGGIEGVPAGQREAGQVLGMTKSQIFFKVTLLQMIKRIVPPMSNE 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SLA  +   +L   G + +   G    +    +F YL    ++ L  N +  
Sbjct: 154 IITLVKDTSLARIIAAQELTFAGYSFMKSAGLTWPLFYTGVF-YLVFVGILTLLFNYIEK 212

Query: 391 KI 392
           K+
Sbjct: 213 KL 214


>gi|313115584|ref|ZP_07801043.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622099|gb|EFQ05595.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 224

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 1/105 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S E  S+ I    +  A ++++VR  LIA+P+ Q E+A ALG++  +    +++PQ
Sbjct: 86  GWNLSGETASI-IVFVLWGTAEMSDLVRGALIAIPKHQYESAEALGMSRAQTYWYIIIPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            +R +IP   +    ++K +SL + +G  +++ V   II     A
Sbjct: 145 TVRRLIPLSINLITRMIKTTSLVLMIGVVEVIKVAQQIIEANRTA 189


>gi|304397040|ref|ZP_07378919.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355189|gb|EFM19557.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 238

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 10/186 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDK---PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L ++  + L+F     PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGASQLLLTLSDGFTLNFGLFTLPVQMQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   AA+ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+
Sbjct: 110 ALAMLYAAYASQTLRGALKAVPVGQWESGQALGMKKSAIFLRLIMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     L+   IYL +++     + R+  +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWFLVAAAIYLVITLFSQAVLRRIELR 229

Query: 392 IALKEK 397
               E+
Sbjct: 230 TTRFER 235


>gi|194292631|ref|YP_002008538.1| ABC transporter, permease protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193226535|emb|CAQ72486.1| putative ABC transporter, permease protein [Cupriavidus taiwanensis
           LMG 19424]
          Length = 263

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+ ++P F+ + I +S + A F AE +R+G+ AVPR  +EAA +L  + R+    V LP 
Sbjct: 124 GNPLTP-FVWVVIVVSLHKAVFHAEALRAGIEAVPRITLEAARSLAFSRRQLLLQVELPL 182

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           A+R  +P L +  ++L+K +++A A+   DL
Sbjct: 183 AVRFALPALVNNVVDLVKMTAVASAIAVGDL 213


>gi|332040824|gb|EGI77196.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 233

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 46/73 (63%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R+G++AVP GQ EAA+ALG++  +  R ++LP A R   P L ++ +  LK ++
Sbjct: 116 YMAEDLRAGILAVPIGQKEAALALGMSVHQVNRWIVLPTAWRIATPALGNEVIAQLKATA 175

Query: 340 LAVAVGFADLVSV 352
           L   +   DL  V
Sbjct: 176 LVSTITVLDLTGV 188


>gi|317472313|ref|ZP_07931641.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes
           sp. 3_2_56FAA]
 gi|316900270|gb|EFV22256.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes
           sp. 3_2_56FAA]
          Length = 219

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 62/102 (60%), Gaps = 3/102 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   A++++E  R GL AV + Q E+ +++GLT  +  R ++LPQA+   +P + + 
Sbjct: 91  IGLTFLGASYMSEAFRGGLEAVNKIQEESGLSIGLTKPQLMRYIILPQALAIAMPSVGAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI 369
            + LLK +S+  A+  ADL+ V   +I    +T +A+ ++++
Sbjct: 151 VIFLLKETSVFSAIALADLMFVAKDLIGMYYKTNEALFMLVV 192


>gi|163758477|ref|ZP_02165565.1| putative transport system permease abc transporter protein [Hoeflea
           phototrophica DFL-43]
 gi|162284766|gb|EDQ35049.1| putative transport system permease abc transporter protein [Hoeflea
           phototrophica DFL-43]
          Length = 259

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 64/125 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+  E++R     VP+G++EA  A G++     R + LP+A+   +P L  +
Sbjct: 134 LALTMSFAAYEGEVMRGAFAGVPKGELEAGRAYGMSPFTVFRRIWLPRAIHRALPTLAGE 193

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  LK + L   +   D+ ++   +   T    E +L+   IY+ L+ ++ L    L A
Sbjct: 194 TVLQLKATPLVATITVVDVYAIISRVRQDTYLTYEPLLLLALIYMMLTGVLVLAFRWLEA 253

Query: 391 KIALK 395
           ++ +K
Sbjct: 254 RVPVK 258


>gi|184155294|ref|YP_001843634.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
 gi|183226638|dbj|BAG27154.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
          Length = 234

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 53/86 (61%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  + A S    A ++E +RS   AV  GQ EAA+A+G+T  +A   +++PQ + ++
Sbjct: 97  PALVITFTAFSLNAMANLSESIRSAYHAVDYGQYEAAVAVGMTPLRAIIQIVVPQLIANL 156

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           IP  T+ +L+L+K+++L   +G  ++
Sbjct: 157 IPNFTNIFLDLIKDTALVYNIGIVEI 182


>gi|329295703|ref|ZP_08253039.1| polar amino acid ABC transporter, inner membrane subunit [Plautia
           stali symbiont]
          Length = 257

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL     A+++E  R+G+ +V +GQ+EAA  LG+   +    V+LPQA R++ P
Sbjct: 88  FTAGVLALGINVGAYLSETFRAGIQSVAKGQLEAAYILGIPRHQIFLSVVLPQAARAVWP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + +  + LL  +SL  A+   +L      I  +T   I+   +   +YL LS
Sbjct: 148 AIINNLIQLLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALVYLVLS 200


>gi|104784171|ref|YP_610669.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95113158|emb|CAK17886.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 221

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 74/133 (55%), Gaps = 8/133 (6%)

Query: 225 STFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYT 277
           +T L+F  P L  +   Y +L  + P+L Q  F+       G  VS  F +  I ++   
Sbjct: 41  ATILVFCTPYLRRLVQGYVELARNTPLLIQLFFVYFALPSLGLKVS-GFTAAIITMTFMG 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E++R+G+ AVPR Q+E+  ++GL+  +  R V+LPQA    +P L + ++ LLK 
Sbjct: 100 GAYLTEVLRAGVEAVPRAQLESGRSIGLSEGQLLRHVILPQAGILSLPALFANFVFLLKE 159

Query: 338 SSLAVAVGFADLV 350
           +++  AV   +++
Sbjct: 160 TTVVSAVAVPEIL 172


>gi|91789815|ref|YP_550767.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91699040|gb|ABE45869.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 233

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 74/137 (54%), Gaps = 9/137 (6%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  M   +AL    +A+  EI+R+G+ ++ R Q+EA ++L +T  +  R V++  A+  +
Sbjct: 88  PPVMGALLALMLNLSAYSTEIIRAGIDSIHRSQLEAGLSLAMTRAQLYRHVVIMPALARV 147

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI-- 381
            P L+SQ++  +  +S+   +   DL++    + + T +  E  LI   IYL++++++  
Sbjct: 148 WPALSSQFVLTMLATSVCSFIPVTDLMAATKFVESNTSRGFEAYLIPAPIYLTMALLMKW 207

Query: 382 -------ALFMNRLNAK 391
                  ALF  + +AK
Sbjct: 208 GLAMLGRALFPAQQDAK 224


>gi|154246380|ref|YP_001417338.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154160465|gb|ABS67681.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 234

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 8/138 (5%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F  P LG F  +G  T +       I ++   AA+  EI+R+G+ ++ + Q+EA  AL
Sbjct: 76  IYFGLPTLG-FR-VGAVTAA------LIGMTINLAAYSTEIIRAGIESIHKSQIEAGEAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R +++  A+  + P L SQ++ ++  SS+  A+   +L +      +Q+ ++
Sbjct: 128 GLTQLQIYRDIIILPAVAKVYPSLCSQFVLMMLASSVCSAISTPELTAAASYAQSQSYRS 187

Query: 364 IEIILIWMFIYLSLSIMI 381
            E+ +    IYL+L++ +
Sbjct: 188 FEVYIAVTLIYLALALTL 205



 Score = 36.2 bits (82), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 33/67 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y   +  G + T WL+ + +   T  G ++ + R      V ++   YVEV RN P L
Sbjct: 11  AQYREQLFDGLLMTVWLSVASIAAGTFFGVVLASLRSVRGGPVRFLVDAYVEVIRNTPFL 70

Query: 143 VVIFFLY 149
           V +F +Y
Sbjct: 71  VQLFIIY 77


>gi|253689165|ref|YP_003018355.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755743|gb|ACT13819.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 229

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +    + P    + I L     A+  E 
Sbjct: 53  TTLIRGIPDLVLMLLIFYGLQIVLNGVTESMGVAQIDIDPLTAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAYLAVPRGQIEAAVAFGFSPMKVFRRILFPSMMRFALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVS 351
           G  D++ 
Sbjct: 172 GLNDVIK 178



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 40/73 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y+  IL G + T  LA S ++ A  IG +  + +LS+N+L+A     Y  + R IP LV
Sbjct: 4   GYSQLILDGAIMTLELAASSLVLALAIGLIGASAKLSSNRLLAGCFSCYTTLIRGIPDLV 63

Query: 144 VIFFLYKSVLSVL 156
           ++  ++  +  VL
Sbjct: 64  LMLLIFYGLQIVL 76


>gi|158423462|ref|YP_001524754.1| polar amino acid ABC transporter permease [Azorhizobium caulinodans
           ORS 571]
 gi|158330351|dbj|BAF87836.1| polar amino acid uptake family ABC transporter permease protein 2
           [Azorhizobium caulinodans ORS 571]
          Length = 290

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 56/100 (56%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +G +   P+++   I  +    A +AEIVR  + ++P GQ EAA +L  + R+   
Sbjct: 143 QFTILGKTIPFPDWVKAVIGFALPVMANMAEIVRGAVKSLPSGQWEAAESLAFSRRQTLW 202

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           +++LPQ ++ ++PP  + Y  +   +  A  VG  +++++
Sbjct: 203 MIILPQCVKRMLPPWMNLYTLVTMATVQASIVGVTEMLTL 242


>gi|149020351|ref|ZP_01835243.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|147930653|gb|EDK81635.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
          Length = 226

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 8/136 (5%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL  + + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLETISQTQQEIGLAIGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN 358
           AV  ADL+ V   +I 
Sbjct: 163 AVALADLMYVAKDLIG 178


>gi|317486179|ref|ZP_07945018.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316922570|gb|EFV43817.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 229

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 69/122 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L   +AA+ ++I R  +  +P GQ  AA ALG+   +A R ++LPQA+R  IP  +++
Sbjct: 97  LVLGMASAAYQSQIFRGSIETLPVGQFRAARALGMNDGQAIRHIVLPQALRLSIPGWSNE 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +  LLK+S+L   +G  ++++    + ++T + + + +    +Y  ++++    +  L  
Sbjct: 157 FSILLKDSALCFVLGTPEIMARTHFVASRTYEHLPLYITAGLLYFGITLVGVHILRVLER 216

Query: 391 KI 392
           K+
Sbjct: 217 KV 218


>gi|294782144|ref|ZP_06747470.1| amino acid ABC transporter, permease protein [Fusobacterium sp.
           1_1_41FAA]
 gi|294480785|gb|EFG28560.1| amino acid ABC transporter, permease protein [Fusobacterium sp.
           1_1_41FAA]
          Length = 240

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 7/156 (4%)

Query: 243 QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +L  + P+L Q  F+       G   SPE   + I L+    +++ E  RS L  + + Q
Sbjct: 79  ELSRNTPLLVQLFFLYYGLPKIGIKFSPELCGI-IGLTFLGGSYMIETFRSALETIDKIQ 137

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+A++LG+T  +  R V+LPQ+    +P LT+  + +LK +S+  A+   D++ V   +
Sbjct: 138 KESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFMLKETSVFSAISLIDMMFVTKDL 197

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I    +  E + + +  YL + + ++LF   L  K+
Sbjct: 198 IGLYYKTEESLFMLVVGYLIILLPLSLFGVWLERKL 233


>gi|167565679|ref|ZP_02358595.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia oklahomensis EO147]
          Length = 229

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 47/86 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R   +AVPRGQ+EA  A G++  +    ++ PQ MR  +P
Sbjct: 94  FVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMSSWRVFARIMFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            + + +  L+K ++L   +G AD+V 
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVVK 179


>gi|254250620|ref|ZP_04943939.1| ABC-type arginine/histidine transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124879754|gb|EAY67110.1| ABC-type arginine/histidine transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 440

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 66/122 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A++A I+R  +  VP G++EA  A G+T  +  R ++ P+A R  +P LT +
Sbjct: 291 VALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTRLQVLRRIVGPRAWRLALPALTGE 350

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++ LA  V   D++     +  +T +  E +     +Y+ L  ++ +   RL  
Sbjct: 351 AILLLKSTVLASTVTVFDVMGTANRLRFETLRVYEPLAGAAIVYVVLVALLTIPAARLEQ 410

Query: 391 KI 392
           +I
Sbjct: 411 RI 412


>gi|51244880|ref|YP_064764.1| glutamine ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50875917|emb|CAG35757.1| probable glutamine ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 221

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 21/222 (9%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           NRGL    + +  +A   +F  + G+V+        R F     + L  +Y S F   G+
Sbjct: 14  NRGLITSVMLIVPSA---IFGLLGGVVIGTL-----RVFGNAPVRRLFNIYASVFR--GV 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + L++  P +G +    G+ V        I     ++A+ +E +R  L A+
Sbjct: 64  PLMVQL---FILYYGLPNIGIYLDAYGAAV--------IGFILCSSAYNSEYIRGALQAI 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ++A  ALG++  +    +++PQA R  +P   ++ + L+K SSLA  V   +L   
Sbjct: 113 KSGQLKAGAALGMSKVQTIVWIVIPQAFRKALPGCGNEVIYLIKYSSLAYIVSCIELTGE 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              I +QT +  E   +    YL L  + +  + R+  ++ +
Sbjct: 173 ARAIASQTFRFTEAFTVVACYYLILVTIASYILKRVEKRLEI 214


>gi|308184722|ref|YP_003928855.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           SJM180]
 gi|308060642|gb|ADO02538.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           SJM180]
          Length = 240

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLG----IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG    ++++L      +HF  K        Y+S  LI G P LV I + +   +
Sbjct: 47  IISFILGLFIAVMVALIKIAPPKHFVHKALLTGVNFYVS--LIRGTPLLVQIVVVF---Y 101

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 102 GLPALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 154 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 213

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 214 YLEAALIYWLFCLVLEVIQKRVE 236


>gi|293609590|ref|ZP_06691892.1| polar amino acid ABC transporter [Acinetobacter sp. SH024]
 gi|292828042|gb|EFF86405.1| polar amino acid ABC transporter [Acinetobacter sp. SH024]
          Length = 229

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 49/87 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  I L+    A+  E  R    +VP+GQ+EAA+A G++  +    VL PQ MR  +P
Sbjct: 94  FVAGVITLAFIYGAYFTETFRGAFQSVPKGQIEAAMAYGMSPWQVFHRVLFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G  D+V +
Sbjct: 154 GIGNNWQVLIKATALVSIIGLTDIVKI 180


>gi|320095230|ref|ZP_08026930.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977834|gb|EFW09477.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 256

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 56/98 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE +R+GL +V   Q E+A +LGL+  +  R V LPQA+   +PPL +  + L+K 
Sbjct: 135 GAYMAEALRAGLDSVAPIQWESAASLGLSPAQVLRFVALPQALAVSVPPLAANTIFLIKE 194

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +S+   V   DLV V   +I  +    E +++ +  YL
Sbjct: 195 TSVVSVVALPDLVYVAKDLIGISYNTSEALVLLVASYL 232


>gi|257067918|ref|YP_003154173.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256558736|gb|ACU84583.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 257

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 2/153 (1%)

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           +L  QL +   VL Q  +  G  + P  + + +AL     A+ AE+VR  + +VP+GQ E
Sbjct: 76  SLVVQLFWLAFVLPQLPYPLGFQLDPLLIGV-LALGLNYGAYGAEVVRGSIGSVPKGQYE 134

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A  AL L+  +    +++PQA   +IP L++ ++ LLK S++  ++   DL      + +
Sbjct: 135 AISALSLSPARGMFRIVIPQAWALMIPSLSNLWIQLLKGSAIVGSITLYDLFFQVEQVRD 194

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +TG     +   +  YL ++ +I + MN L  +
Sbjct: 195 RTGTWFAYLFALVAYYL-IAWVIVIVMNGLEIR 226


>gi|227514608|ref|ZP_03944657.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087019|gb|EEI22331.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 234

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  + A S    A ++E +RS   AV  GQ EAA+A+G+T  +A   +++PQ + ++
Sbjct: 97  PALVIAFTAFSLNVMANLSESIRSAYHAVDYGQYEAAVAVGMTPLRAIIQIVVPQLIANL 156

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           IP  T+ +L+L+K+++L   +G  +++     II+  G
Sbjct: 157 IPNFTNIFLDLIKDTALVYNIGIVEIMG-EANIISAIG 193


>gi|171316137|ref|ZP_02905362.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171098741|gb|EDT43535.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 228

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 24/143 (16%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+ FGLP L        +H D                 E+ +  +A++    A+  EIVR
Sbjct: 78  FIFFGLPAL-------GVHID-----------------EYTAATLAMTLNLGAYSVEIVR 113

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP+G +EAA AL ++  +  R V+LPQA+  + P L SQ +  +  S++   +  
Sbjct: 114 AGVAAVPKGHLEAAAALAMSRAQMLRHVVLPQALAKVFPALASQIVITMLGSAVVSQISV 173

Query: 347 ADLVSVGGTIINQTGQAIEIILI 369
           ADL      I ++  ++ E   +
Sbjct: 174 ADLTYAASYIQSRNFRSFETYFV 196


>gi|289168270|ref|YP_003446539.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
 gi|288907837|emb|CBJ22677.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
          Length = 225

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H K  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  MFGTVMGIIMT---------SHSKIVRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  ALGL + +
Sbjct: 82  ARNFNINISGKT------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLINVQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|50914755|ref|YP_060727.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS10394]
 gi|94994868|ref|YP_602966.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS10750]
 gi|50903829|gb|AAT87544.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS10394]
 gi|94548376|gb|ABF38422.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS10750]
          Length = 297

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 231 GLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y     F K +  ++ F       P  +    A +   AA+ +E +R+ 
Sbjct: 117 GTPILVQLMLTYYGIPLFLKFLNQKYGFDWNVNAIPASIFAITAFAFNEAAYASETIRAA 176

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG--- 345
           +++V  G++EAA +LG+T  +  R V++P A    IP L +  + L K +SLA   G   
Sbjct: 177 ILSVDTGEIEAAKSLGMTSVQVYRRVIIPNATVVAIPTLINGLIGLTKGTSLAFNAGIVE 236

Query: 346 -FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            FA    +GG+      + I + L    +Y S+SI++      +  K+A+K
Sbjct: 237 MFAQAQILGGSDYRYFERYISVAL----VYWSISILMEQVGRLIENKMAIK 283


>gi|19746578|ref|NP_607714.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes MGAS8232]
 gi|19748793|gb|AAL98213.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes MGAS8232]
          Length = 297

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 231 GLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y     F K +  ++ F       P  +    A +   AA+ +E +R+ 
Sbjct: 117 GTPILVQLMLTYYGIPLFLKFLNQKYGFDWNVNAIPASIFAITAFAFNEAAYASETIRAA 176

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG--- 345
           +++V  G++EAA +LG+T  +  R V++P A    IP L +  + L K +SLA   G   
Sbjct: 177 ILSVDTGEIEAAKSLGMTSVQVYRRVIIPNATVVAIPTLINGLIGLTKGTSLAFNAGIVE 236

Query: 346 -FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            FA    +GG+      + I + L    +Y S+SI++      +  K+A+K
Sbjct: 237 MFAQAQILGGSDYRYFERYISVAL----VYWSISILMEQVGRLIENKMAIK 283


>gi|331014464|gb|EGH94520.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 244

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 70/136 (51%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G +     F  + I +S +  AF AE +R+G+ AVP   +EAA +L    R+    V L
Sbjct: 102 VGAANPLTPFAWVVIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFNSRQLLWNVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q+   +E++++ +  +  
Sbjct: 162 PLAVRFALPSLVNNLIDLVKMTAVASAIAVNDITYASIMIWTQSDNVLELMILLLSFFAV 221

Query: 377 LSIMIALFMNRLNAKI 392
           LS  +      L A++
Sbjct: 222 LSFAVNCAGRALEARL 237


>gi|300931334|ref|ZP_07146666.1| arginine/ornithine transport protein [Escherichia coli MS 187-1]
 gi|331653751|ref|ZP_08354752.1| histidine transport system permease protein HisQ [Escherichia coli
           M718]
 gi|300460839|gb|EFK24332.1| arginine/ornithine transport protein [Escherichia coli MS 187-1]
 gi|331048600|gb|EGI20676.1| histidine transport system permease protein HisQ [Escherichia coli
           M718]
          Length = 228

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      + +   +G   + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +    ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRGQVFLRIMFPAMMRYALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|238759069|ref|ZP_04620239.1| Histidine transport system permease protein hisM [Yersinia aldovae
           ATCC 35236]
 gi|238702746|gb|EEP95293.1| Histidine transport system permease protein hisM [Yersinia aldovae
           ATCC 35236]
          Length = 154

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 23  LALTLNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSRFKLYRCIILPSALRIALPAYSNE 82

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 83  VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISYTLISLF 137


>gi|71904066|ref|YP_280869.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|94988989|ref|YP_597090.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94990989|ref|YP_599089.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|94992882|ref|YP_600981.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS2096]
 gi|71803161|gb|AAX72514.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|94542497|gb|ABF32546.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94544497|gb|ABF34545.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS10270]
 gi|94546390|gb|ABF36437.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS2096]
          Length = 297

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 231 GLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y     F K +  ++ F       P  +    A +   AA+ +E +R+ 
Sbjct: 117 GTPILVQLMLTYYGIPLFLKFLNQKYGFDWNVNAIPASIFAITAFAFNEAAYASETIRAA 176

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG--- 345
           +++V  G++EAA +LG+T  +  R V++P A    IP L +  + L K +SLA   G   
Sbjct: 177 ILSVDTGEIEAAKSLGMTSVQVYRRVIIPNATVVAIPTLINGLIGLTKGTSLAFNAGIVE 236

Query: 346 -FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            FA    +GG+      + I + L    +Y S+SI++      +  K+A+K
Sbjct: 237 MFAQAQILGGSDYRYFERYISVAL----VYWSISILMEQVGRLIENKMAIK 283


>gi|171185752|ref|YP_001794671.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoproteus neutrophilus V24Sta]
 gi|170934964|gb|ACB40225.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoproteus neutrophilus V24Sta]
          Length = 229

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P F +  IAL   +AA+ AEI RS + A+P  Q   A A   T  +  R ++LPQ
Sbjct: 84  GLNIDP-FTAGVIALGLNSAAYQAEIFRSAVQAIPLEQYLTAEAYAFTKTQTFRYIILPQ 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           A+R  +P L ++ + L+K+SSL   +G A
Sbjct: 143 ALRIALPALMNELVLLIKDSSLVAVIGVA 171


>gi|162418405|ref|YP_001604959.1| histidine transport system permease HisM [Yersinia pestis Angola]
 gi|162351220|gb|ABX85168.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           Angola]
          Length = 238

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKLYRCIILPAASRISLPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YLS+S  +I+LF
Sbjct: 167 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFSIAAVLYLSISFTLISLF 221


>gi|301344837|ref|ZP_07225578.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB056]
          Length = 211

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 24/156 (15%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F+ +  +  PLL    FL +GLP L    +K    F   V+G   F+GGS         
Sbjct: 46  QFYIELSRNTPLLIQLFFLYYGLPKL---GIKID-GFTCGVIG-LTFLGGS--------- 91

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
                     ++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +
Sbjct: 92  ----------YMAEAFRAGLQSVAKGQIDSAKSIGLQPTQIFRYVIFPQALAISIPAIGA 141

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             L L+K SS+  A+   +L+ V   +I    +  E
Sbjct: 142 NCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTE 177


>gi|148655935|ref|YP_001276140.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus sp. RS-1]
 gi|148568045|gb|ABQ90190.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus sp. RS-1]
          Length = 224

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 63/113 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              + ++ L   +AA+ AE +RS L +V  GQM AA ALG++  +A   ++LPQA+R  +
Sbjct: 87  RLQAAFLTLGLNSAAYQAEYLRSALQSVSEGQMTAARALGMSKWQAIWSIILPQAVRLAL 146

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           P  +++ + +LK +S+   +   DL+     + ++    I+I LI    Y+ L
Sbjct: 147 PAWSNEAVAMLKYTSVVFLIAVPDLMGQAKILSSRYFAPIQIYLIVAVFYIVL 199


>gi|21492783|ref|NP_659858.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|21467208|gb|AAM54871.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 231

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 9/165 (5%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +F  S   G +L L    L R+   K+  +    Y  T +I G+P L++I L Y   F  
Sbjct: 28  VFALSCAFGTLLGLLIAVL-RNSTRKSVSSCMRAY--TGIIRGVPELLIILLTY---FGG 81

Query: 249 PVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             L   + I G  +    F +   AL+   + + AEI R  + AV  GQ EAA ALGL++
Sbjct: 82  TAL--LSAIAGGYIEINAFAAGVAALTVVFSGYAAEIFRGAINAVAPGQREAAAALGLSN 139

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +   L+++PQ +   +P   +  ++L+K++SL   VG  D++ V
Sbjct: 140 AQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLISVVGLTDVMRV 184


>gi|15802854|ref|NP_288881.1| histidine transport, membrane protein M [Escherichia coli O157:H7
           EDL933]
 gi|25296580|pir||H85871 histidine transport, membrane protein M [imported] - Escherichia
           coli (strain O157:H7, substrain EDL933)
 gi|12516663|gb|AAG57436.1|AE005462_11 histidine transport, membrane protein M [Escherichia coli O157:H7
           str. EDL933]
          Length = 238

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA   G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARXYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|323184372|gb|EFZ69748.1| histidine transport system permease protein hisQ [Escherichia coli
           1357]
          Length = 164

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + 
Sbjct: 34  ITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNN 93

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           +  +LK+++L   +G  D+V         T +     ++   IYL   ++S  + LF+ R
Sbjct: 94  WQVILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLER 153


>gi|303328129|ref|ZP_07358568.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
 gi|302861955|gb|EFL84890.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
          Length = 222

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 54/92 (58%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ +E +R  L+++ +GQ+ AA ALG +  +    +++PQA R  +P   ++ + L+K
Sbjct: 99  TAAYQSEYIRGALLSIRQGQIRAAQALGFSTWQTVAWIVVPQAARRALPGCGNEIIYLIK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            SSLA  V   +L+  G  + + T +  E+ +
Sbjct: 159 YSSLAYLVTCMELMGEGKVVASDTFRFTEVFI 190


>gi|161502502|ref|YP_001569614.1| hypothetical protein SARI_00546 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863849|gb|ABX20472.1| hypothetical protein SARI_00546 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 228

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L     V+     I    + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIEQIDIDPMVAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAFMAVPKGHIEAATAFGFTRWQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLEDVVK 178


>gi|323492514|ref|ZP_08097662.1| ABC transporter permease [Vibrio brasiliensis LMG 20546]
 gi|323313301|gb|EGA66417.1| ABC transporter permease [Vibrio brasiliensis LMG 20546]
          Length = 225

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 57/105 (54%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G+      R ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMGTFMTYRRIILPSALRRALPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ +I
Sbjct: 162 GSAVAGIVTIVDLTGAARLVNSRYYAPFESFLTAGLFYMALTFII 206


>gi|187919546|ref|YP_001888577.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717984|gb|ACD19207.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 220

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 21/179 (11%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL LF  R  R            LYI  F   G P LV +   + L++  P  G      
Sbjct: 43  VLQLFCGRWVRGVLR--------LYIELFR--GTPFLVQL---FLLYYGGPSFGL----- 84

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             T+ P    + + L  Y +A+ AE  RSG  +VP G +EAA  LGLT  +A   + +PQ
Sbjct: 85  --TLEPMTAGV-LGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLGLTRWQAVLRIQVPQ 141

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +  I+P LT+  + L K +++   V   +L  V   I + T   +E +L+    YL+L
Sbjct: 142 MLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFVETLLVLCVCYLAL 200


>gi|260904763|ref|ZP_05913085.1| ABC amino acid transporter, permease component [Brevibacterium
           linens BL2]
          Length = 219

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 8/144 (5%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F  I G    P  +  +I +  + + +++E  R+G+ +VP GQ EAA AL L   +    
Sbjct: 78  FAGIPGLVDVPALVIGFIVIGIHYSTYMSESYRAGIDSVPPGQHEAATALSLPPVRKFTA 137

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA----IEIILI 369
           ++LPQA+R+ +P L +  + + K++    A+   +LV    T   Q G A     E   +
Sbjct: 138 IVLPQALRATVPSLGNYAVAMFKDTPFLFAISVVELV----TSAQQFGAAKFAYTEAFTL 193

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              I+L+ S   +L + R+  ++A
Sbjct: 194 AGLIFLAASYPTSLLIQRMEKRLA 217


>gi|260221297|emb|CBA29721.1| Histidine transport system permease protein hisM [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 237

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 14/127 (11%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG--STVSP------EFMSLYIALSCYT 277
           T++I G P L+ + L Y        LGQ  +I      V P       F    +A S  T
Sbjct: 59  TYVIRGTPLLIQVYLIYY------GLGQLEWIQARWDDVWPWTHFKEPFFCALLAFSLNT 112

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A + AE++   +     G++EAA A G++  +A R ++LP A+R  +P  +++ + +L++
Sbjct: 113 AGYTAEMLAGAIRETAAGELEAAQAYGMSRFQAMRRIVLPSALRRTLPAYSNEVVMMLQS 172

Query: 338 SSLAVAV 344
           +SLA AV
Sbjct: 173 TSLASAV 179


>gi|330821199|ref|YP_004350061.1| cystine ABC transporter permease [Burkholderia gladioli BSR3]
 gi|327373194|gb|AEA64549.1| cystine ABC transporter permease [Burkholderia gladioli BSR3]
          Length = 217

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 50/97 (51%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  +ALS  T AF  EI R+ L+A+P  Q+EA  A G +  +    ++LPQ  R+ 
Sbjct: 80  PPMAAATLALSLNTTAFNCEIWRAALLALPADQLEAGAAFGFSGWQTLVRIVLPQLWRAS 139

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           + PL S+   LLK +  A  +G  D+    G I   T
Sbjct: 140 LGPLVSEITLLLKITPAASVIGIVDITRAAGRIGADT 176


>gi|307706281|ref|ZP_07643094.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus mitis SK321]
 gi|307618314|gb|EFN97468.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus mitis SK321]
          Length = 225

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 23/183 (12%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F  V+GI+++          H +  + L  LY+    I  +P LVL+ + Y       +
Sbjct: 38  IFGTVMGIIMT---------SHSRIVRFLTRLYLEFIRI--MPQLVLLFIVY-----FGL 81

Query: 251 LGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              FN  I G T      S  I  + +  A + ++VR  + ++P+ Q E+  AL LT+ +
Sbjct: 82  ARNFNINISGET------SAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALDLTNVQ 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 136 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 195

Query: 370 WMF 372
           W++
Sbjct: 196 WIY 198


>gi|116255413|ref|YP_771246.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260061|emb|CAK03160.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 241

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 16/175 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+   A       VLG +++  A +LS +    T   L  +Y + F   G+P L++I L
Sbjct: 24  MTLAVTATALAIGAVLGAIVA--AAKLSGNIILVT---LGNVYTTVFR--GVPELLIIYL 76

Query: 241 KY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            Y      +      +G   F+G     P F++  +A+   + ++ AE+ R   +A+ +G
Sbjct: 77  IYFGGSSAVTAIGKAMGYEGFLG----LPSFIAGALAVGIISGSYQAEVFRGAFLAISKG 132

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++EAA A+G+      R +++PQ  R  IP L + +   LK+S+L    G A+L+
Sbjct: 133 ELEAASAIGMHRGMRLRRIIMPQVFRLAIPGLGNVWQLSLKDSALISVTGLAELM 187



 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 17/75 (22%)

Query: 90  LVGFVNTFWLAFSGMIPAT---------------IIGTLVGAGRLSANKLVAWICRVYVE 134
           L+GF +T W A   +I AT               ++G +V A +LS N ++  +  VY  
Sbjct: 6   LLGFGSTGWGAL--LIAATLMTLAVTATALAIGAVLGAIVAAAKLSGNIILVTLGNVYTT 63

Query: 135 VFRNIPPLVVIFFLY 149
           VFR +P L++I+ +Y
Sbjct: 64  VFRGVPELLIIYLIY 78


>gi|270621092|ref|ZP_06221888.1| Arginine transport system permease protein artQ [Haemophilus
           influenzae HK1212]
 gi|270317719|gb|EFA29117.1| Arginine transport system permease protein artQ [Haemophilus
           influenzae HK1212]
          Length = 104

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 45/69 (65%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+
Sbjct: 34  ALSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQW 93

Query: 332 LNLLKNSSL 340
           L LLK+++L
Sbjct: 94  LVLLKDTAL 102


>gi|323127864|gb|ADX25161.1| Amino acid ABC transporter permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 267

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A    IP L +  
Sbjct: 130 AFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNAAVVAIPTLINGL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L    +Y S+SI+I      
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVAL----VYWSISILIEQVGRL 245

Query: 388 LNAKIALKEKK 398
           +  ++A+K  +
Sbjct: 246 IENRMAIKAPE 256


>gi|224827114|ref|ZP_03700210.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224600623|gb|EEG06810.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 243

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 10/163 (6%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYT 277
           +++ T++  G P LV      QL      L QF  +  S         Y    +A +  T
Sbjct: 66  VWLYTYVFRGTPMLV------QLFIIYYGLSQFEAVRESWAWTYLQEAYFCALLAFTLNT 119

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  EI+   +     G++EAA A+G++     R +++P A+R  +P  +++ + +L+ 
Sbjct: 120 AAYTTEIIAGQIRNTHWGEIEAAKAMGMSKWLMMRRIVIPAALRRALPAYSNEVVMMLQG 179

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +S+A  V  AD+  V   I + T    E  L+   IYL+ + +
Sbjct: 180 TSIAGLVTLADVTGVARRIYSDTYMPFEPFLMAGLIYLAFTFL 222


>gi|146306127|ref|YP_001186592.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145574328|gb|ABP83860.1| L-ornithine ABC transporter membrane protein / L-arginine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 229

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 18/150 (12%)

Query: 215 TGKAL---PLLYISTF------LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGS 260
           TG AL   PL +++        LI G+P LVLI L +    D      P LG   +I   
Sbjct: 33  TGAALRLSPLRWLANLGDAYATLIRGIPDLVLILLIFYGGQDLVNRIAPSLGYTAYI--- 89

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            ++P F++    +     A+++E  R   +A+ +GQ EA  A G++  +    +L+PQ +
Sbjct: 90  DINP-FVAGVFTMGFIFGAYLSETFRGAFMAIAKGQAEAGAAYGMSSAQVFFRILVPQMI 148

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           R  IP  T+ +L L K ++L   VG  D++
Sbjct: 149 RFAIPGFTNNWLVLTKATALISVVGLQDMM 178


>gi|330466995|ref|YP_004404738.1| glutamine ABC transporter permease [Verrucosispora maris AB-18-032]
 gi|328809966|gb|AEB44138.1| glutamine ABC transporter permease protein [Verrucosispora maris
           AB-18-032]
          Length = 255

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 48/83 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           + ++AE+ R+G+ +V   Q+ AA +LGLT+R+  R V+LPQA+R + PPL +  + L K+
Sbjct: 135 SGYLAEVFRAGIESVHPSQLAAARSLGLTYRQTMRHVVLPQAVRRVAPPLLNDVVALQKD 194

Query: 338 SSLAVAVGFADLVSVGGTIINQT 360
             L    G  D V        Q+
Sbjct: 195 VGLVSLAGPIDAVRAAQIATAQS 217


>gi|139473300|ref|YP_001128015.1| ABC transporter permease protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134271546|emb|CAM29770.1| ABC transporter permease protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 267

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A    IP L +  
Sbjct: 130 AFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNATVVAIPTLINGL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L    +Y S+SI++      
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVAL----VYWSISILMEQVGRL 245

Query: 388 LNAKIALKEKK 398
           +  K+A+K  +
Sbjct: 246 IENKMAIKAPE 256


>gi|126667082|ref|ZP_01738057.1| putative amino acid ABC transporter permease protein [Marinobacter
           sp. ELB17]
 gi|126628488|gb|EAZ99110.1| putative amino acid ABC transporter permease protein [Marinobacter
           sp. ELB17]
          Length = 241

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 1/91 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP ++++  AL    A ++ E  R G  ++P  Q  A+ +LG+T  +  R ++LPQ
Sbjct: 104 GIHLSP-YVAVLSALVFINAGYLTETFRGGFQSIPNTQYSASKSLGMTSIQVYRYIILPQ 162

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +R I  P+T+Q++  +  SSL + VG  +L
Sbjct: 163 MLRRIYHPMTNQFVWSILMSSLGILVGMGEL 193


>gi|327191404|gb|EGE58429.1| octopine ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 241

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 9/125 (7%)

Query: 231 GLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P L++I L Y      +     V+G   F+G     P F +  +A+   + ++ AE+ 
Sbjct: 67  GVPELLIIYLIYFGGSSAVTSIGKVMGYEGFLG----LPSFAAGALAVGIISGSYQAEVF 122

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+ +G++EAA A+G+      R +++PQ +R  IP L + +   LK+S+L    G
Sbjct: 123 RGAYLAIAKGELEAASAIGMHRGMRFRRIIIPQVLRFAIPGLGNVWQLSLKDSALISVTG 182

Query: 346 FADLV 350
            A+L+
Sbjct: 183 LAELM 187



 Score = 39.7 bits (91), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 13/77 (16%)

Query: 86  ATAILVGFVNTFWLAF-------------SGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           AT  L+GF +T W A              + +    ++G +V   +LS N L+     VY
Sbjct: 2   ATLELLGFGSTGWGALLILAALMTLAVTATALAIGAVLGAIVAGAKLSGNPLLVAFGNVY 61

Query: 133 VEVFRNIPPLVVIFFLY 149
             VFR +P L++I+ +Y
Sbjct: 62  TTVFRGVPELLIIYLIY 78


>gi|23464702|ref|NP_695305.1| permease of ABC transporter system for amino acids [Bifidobacterium
           longum NCC2705]
 gi|227546808|ref|ZP_03976857.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239620788|ref|ZP_04663819.1| permease of ABC transporter system for amino acids [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|312132396|ref|YP_003999735.1| hism4 [Bifidobacterium longum subsp. longum BBMN68]
 gi|322691560|ref|YP_004221130.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|23325267|gb|AAN23941.1| permease of ABC transporter system for amino acids [Bifidobacterium
           longum NCC2705]
 gi|227212770|gb|EEI80651.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239516364|gb|EEQ56231.1| permease of ABC transporter system for amino acids [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|311772684|gb|ADQ02172.1| HisM4 [Bifidobacterium longum subsp. longum BBMN68]
 gi|320456416|dbj|BAJ67038.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 224

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 51/83 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P+ Q E++  LGL+  +    V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALQSIPKVQYESSYVLGLSPWQTFSRVILPQAVRRMLPASVNLATRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|23336042|ref|ZP_00121271.1| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189438955|ref|YP_001954036.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|322689599|ref|YP_004209333.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|189427390|gb|ACD97538.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|291516168|emb|CBK69784.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|320460935|dbj|BAJ71555.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 224

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 51/83 (61%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A + ++VR  L ++P+ Q E++  LGL+  +    V+LPQA+R ++P   +    ++
Sbjct: 100 WGGAELGDLVRGALQSIPKVQYESSYVLGLSPWQTFSRVILPQAVRRMLPASVNLATRIV 159

Query: 336 KNSSLAVAVGFADLVSVGGTIIN 358
           K +SLAV +G  +++ VG  II+
Sbjct: 160 KTTSLAVLLGVVEVIKVGQQIID 182


>gi|145297727|ref|YP_001140568.1| ABC-type arginine transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850499|gb|ABO88820.1| ABC-type arginine transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 216

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 16/131 (12%)

Query: 226 TFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTV--SPEFMSLYIALSCYTAA 279
           T LI GLP L+++   Y    Q+ F          I G  V  SP F    +ALS   A+
Sbjct: 49  TTLIRGLPELLVVLFIYFGSTQVLF---------LITGEYVEFSP-FACGVLALSLLFAS 98

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  + +R+ L AVP GQ  AA+ALGL        ++LPQA R  +P L +Q+L LLK+++
Sbjct: 99  YATQTLRAALNAVPAGQRLAALALGLGKGHIFFRIVLPQAWRHALPGLGNQWLVLLKDTA 158

Query: 340 LAVAVGFADLV 350
           L   +G  +++
Sbjct: 159 LVSLIGVNEMM 169


>gi|170722937|ref|YP_001750625.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169760940|gb|ACA74256.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 229

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P++G  ++I    ++P    +   L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDIINRLGPLVGYDDYI---DLNPLVAGIG-TLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   + +P+GQ EA  A G+++R+    + +PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFLGIPKGQAEAGAAYGMSNRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDMYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|116511754|ref|YP_808970.1| ABC-type amino acid transport system, permease component
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116107408|gb|ABJ72548.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 295

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 67/132 (50%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + + +A +    A+ +E +R+ + +V +GQ+EAA +LG+T+ +    V L +A    
Sbjct: 142 PAMLFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLSEAATVA 201

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
             PL +  + LLK++SLA   G  ++ +    I   T +  E  L    +Y  + I+  +
Sbjct: 202 TAPLGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVYWPICIIFEI 261

Query: 384 FMNRLNAKIALK 395
            +  L  K+ ++
Sbjct: 262 LIRALERKLDVR 273


>gi|15675528|ref|NP_269702.1| putative amino acid ABC transporter permease [Streptococcus
           pyogenes M1 GAS]
 gi|71911176|ref|YP_282726.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS5005]
 gi|13622728|gb|AAK34423.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes M1 GAS]
 gi|71853958|gb|AAZ51981.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS5005]
          Length = 267

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A    IP L +  
Sbjct: 130 AFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNATVVAIPTLINGL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L    +Y S+SI++      
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVAL----VYWSISILMEQVGRL 245

Query: 388 LNAKIALKEKK 398
           +  K+A+K  +
Sbjct: 246 IENKMAIKAPE 256


>gi|39939074|ref|NP_950840.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39722183|dbj|BAD04673.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 576

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 52/87 (59%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L +F F   +T      + Y+ +   T  +I+EI+   +  + +GQ+EA+++LG+TH + 
Sbjct: 433 LKEFAFFQNATWYTPMFAAYMVIILNTMGYISEIITKNISFLDKGQIEASLSLGMTHTQT 492

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            R ++LPQA++    P+ ++++  LK+
Sbjct: 493 MRYIVLPQAIKRSQTPILNEFIINLKD 519


>gi|254518097|ref|ZP_05130153.1| polar amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226911846|gb|EEH97047.1| polar amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 221

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS    A++AE  R G+ AV + Q+E+  ALGL+  +  R +++P +    IP + + 
Sbjct: 93  IGLSFLGGAYMAESFRGGIDAVAKSQIESGQALGLSKTQILRYIVMPMSFSISIPSIVAN 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQA-IEIILIWMFIYLSLSIMIALFMN 386
            + L+K +S+  ++  A+L+ V   +I    +T +A I +++ ++ I L +SI+  +   
Sbjct: 153 CIFLVKETSIIGSIAVAELMFVTKDVIGMYYKTNEALILVVVFYLMILLPISIISRILER 212

Query: 387 RLN 389
           RL 
Sbjct: 213 RLR 215


>gi|251783113|ref|YP_002997416.1| truncated amino acid ABC transporter permease [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391743|dbj|BAH82202.1| truncated amino acid ABC transporter permease protein
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
          Length = 267

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A    IP L +  
Sbjct: 130 AFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVIIPNAAVVAIPTLINGL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L    +Y S+SI+I      
Sbjct: 190 IGLTKGTSLAFNAGIVETFAQAQILGGSDYRYFERYISVAL----VYWSISILIEQVGRL 245

Query: 388 LNAKIALKEKK 398
           +  ++A+K  +
Sbjct: 246 IENRMAIKAPE 256


>gi|322831960|ref|YP_004211987.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167161|gb|ADW72860.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 228

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSL-YIALSCYTAAFI 281
           T LI G+P LVL+ L +   Q+  +         +G + +  + MS   I L     A+ 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNSVT----ESLGLTQIDIDPMSAGIITLGFIYGAYF 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   +AVPRGQ+EAA A G +  +  R +L P  MR  +P + + +  +LK ++L 
Sbjct: 109 TETFRGAFMAVPRGQIEAATAFGFSGSQIFRRILFPAMMRFALPGIANNWQVILKATALV 168

Query: 342 VAVGFADLV 350
             +G  D+V
Sbjct: 169 SLLGLNDVV 177



 Score = 39.7 bits (91), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y+  I+ G + T  LA S +I A +IG +   G+LS N++V+     Y  + R +P LV
Sbjct: 4   GYSQVIIQGTLVTLELAISSVILALVIGLIGAGGKLSKNRIVSGFFGCYTTLIRGVPDLV 63

Query: 144 VIFFLY 149
           ++  ++
Sbjct: 64  LMLLIF 69


>gi|255525499|ref|ZP_05392435.1| amino acid ABC transporter permease [Clostridium carboxidivorans
           P7]
 gi|255510767|gb|EET87071.1| amino acid ABC transporter permease [Clostridium carboxidivorans
           P7]
          Length = 98

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 57/90 (63%), Gaps = 2/90 (2%)

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALG+++ +    +++PQA+R++IP + ++ +NL+K+++L  A+G  DL+     I+
Sbjct: 2   EAAKALGMSYGQTMVKIIIPQAVRNVIPAVCNESINLIKDTALVAAIGIGDLLRAAKEIV 61

Query: 358 NQTGQAIEIILIWMFIYLSL-SIMIALFMN 386
            +    I   +I   +YL + SI++ +F N
Sbjct: 62  TR-DFTITPFMIAAVVYLFITSILVTVFRN 90


>gi|260430904|ref|ZP_05784876.1| glutamine ABC transporter permease protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418345|gb|EEX11603.1| glutamine ABC transporter permease protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 277

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 51/84 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A++AEI RSG+ +V   Q  AA++LGLT  +  R V+LPQA+R+++P   + 
Sbjct: 152 LALILTYSAYVAEIFRSGIDSVHHSQRAAALSLGLTEGQVMRDVVLPQAVRNVVPSQMNM 211

Query: 331 YLNLLKNSSLAVAVGFADLVSVGG 354
            + L K+ SL   +G  ++    G
Sbjct: 212 LIALQKDVSLLSFIGPVEIFRQAG 235


>gi|171778291|ref|ZP_02919497.1| hypothetical protein STRINF_00339 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282991|gb|EDT48415.1| hypothetical protein STRINF_00339 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 227

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 8/133 (6%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L++  P +G         V P  +   + L     +++AE  RSGL AV + Q E  +
Sbjct: 71  YFLYYGLPKVG--------VVLPSELCAIVGLIFLGGSYMAESFRSGLEAVSKRQYEVGL 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ++GL+H +    V+LPQA+   +P L +  + L+K +S+   V  ADL+ +   +I    
Sbjct: 123 SIGLSHLQNVFYVILPQAIAVALPSLVANIIFLVKETSVFSIVALADLMYIAKDLIGLYY 182

Query: 362 QAIEIILIWMFIY 374
           +  E +L+ +  Y
Sbjct: 183 ETDEALLMLVVAY 195



 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           V T  LA  G++ A I+G  +   +     +++ IC++Y+E+ RN P L+ ++FLY    
Sbjct: 19  VLTIRLALFGILGAIILGFFISLIKYYNVAILSQICQIYIELSRNTPLLIQLYFLYYG-- 76

Query: 154 SVLPIPDHSIVLP 166
               +P   +VLP
Sbjct: 77  ----LPKVGVVLP 85


>gi|308071440|ref|YP_003873045.1| Probable amino-acid ABC transporter permease protein ytmL
           [Paenibacillus polymyxa E681]
 gi|305860719|gb|ADM72507.1| Probable amino-acid ABC transporter permease protein ytmL
           [Paenibacillus polymyxa E681]
          Length = 238

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 15/213 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL------KYQLHF 246
           S +LG ++ L AT L R +       L  LY+S   I G P +V + L      K+  +F
Sbjct: 31  SMLLGGIIGL-ATALIRIYKVPVLAPLSTLYVSY--IRGTPLIVQLFLVYYGIPKFLYYF 87

Query: 247 DKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L QFN      + PE  +L ++ S     +++E  R+ + +V RGQ EAA ++G
Sbjct: 88  QSEYGFLQQFNV---YVIPPELFAL-LSFSLNLGGYLSETFRAAIHSVDRGQFEAANSIG 143

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    ++LPQA+   +P L +  ++ +K++S    +G  D++     +  +     
Sbjct: 144 MSQTQIMLKIVLPQALTVALPNLGNTLISTVKDTSFIFMIGVVDMMGQAKIMGARALAFF 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E+ +    IY  + I+I   +  L  +I + E+
Sbjct: 204 EVYVAVSLIYWLVCIIIERGLVVLEKRIRIYER 236


>gi|153010840|ref|YP_001372054.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562728|gb|ABS16225.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 240

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 14/194 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F+LG  + +FA   ++    +T +A+   Y  T +I G+P L++I   Y  +F    
Sbjct: 33  VLGFLLGAAIGVFAA-WAKISGGRTLRAVADGY--TTIIRGIPDLLVI---YLFYFGGSA 86

Query: 251 ----LGQFNFIGGSTVSPEFMS--LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               LG++    G    P F++  L IA+SC   A   E+ R    AV +G++EAA A G
Sbjct: 87  AVTALGKYFGAEGFIGFPGFLAGVLAIAISC--GAHHTEVFRGAFRAVSKGELEAATACG 144

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R ++ P A+R  +P L + +   LK S+L    G  +L+         TG   
Sbjct: 145 MGQMLKFRRIIAPLALRHALPGLGNVWQVSLKESALVSVAGVVELLRQAQIGAGSTGLPF 204

Query: 365 EIILIWMFIYLSLS 378
              LI   +YL +S
Sbjct: 205 NFFLIAGALYLLIS 218


>gi|170741748|ref|YP_001770403.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196022|gb|ACA17969.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 217

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 11/164 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P +V +   + ++F  P  G    I  + V    + L +A S Y A    E  R+
Sbjct: 61  VIRGIPIIVQL---FYIYFVLPDFG----IALTAVQAGVLGLGLAYSAYHA----ENFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+  GQ+EAA  +G+      R V+LPQA+R  +PP  +  + +LK+SS A  +  A
Sbjct: 110 AIEAIDGGQIEAAQTIGMGWGLTMRRVVLPQALRIALPPYGNVMIMMLKDSSQASTITVA 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   G  I + T +   +  +   +YL+LS+ + L +     +
Sbjct: 170 ELALQGKLIASATFKNTSVFTLVALMYLALSLPLILIVRHTEKR 213


>gi|325272612|ref|ZP_08138971.1| ABC-type arginine transport system, permease component [Pseudomonas
           sp. TJI-51]
 gi|324102254|gb|EGB99741.1| ABC-type arginine transport system, permease component [Pseudomonas
           sp. TJI-51]
          Length = 229

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  E  R    +VP GQ+EAA+A G+  R+    VL PQ MR  +P + + +  L+K 
Sbjct: 106 GAYFTETFRGAFQSVPAGQLEAAVAYGMNRRQVFVRVLFPQMMRFALPGIGNNWQVLIKA 165

Query: 338 SSLAVAVGFADLVSV 352
           ++L   +G  D+V V
Sbjct: 166 TALVSIIGLIDIVKV 180


>gi|56697507|ref|YP_167875.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56679244|gb|AAV95910.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 264

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 13/121 (10%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L F+  + G+  F+      P ++   + LS    A I+EIVR  + +VP  Q EAA AL
Sbjct: 114 LPFEVTIFGKAYFV------PAWIKAVVGLSLPIMANISEIVRGAIRSVPNTQWEAAEAL 167

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
             T ++    ++LPQ  + +IPP  + Y  L   + L   +G  +       ++N T QA
Sbjct: 168 AFTRQQTMWRIILPQCFKRMIPPWMNWYAILTMATPLVSILGVEE-------VMNLTRQA 220

Query: 364 I 364
           I
Sbjct: 221 I 221


>gi|86138598|ref|ZP_01057171.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85824658|gb|EAQ44860.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 268

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 10/172 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           FL  G P  +     Y L  +   +  F       +S  +    I L   TAA+ AEI  
Sbjct: 81  FLFRGSPLFIQFFFAYSLFLNLKSVSSFF----DPLSSAWAGALIVLFLNTAAYSAEIFY 136

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L ++PRG +EAA A GLT     R V+ P  MR   P  T++ + L   ++L    GF
Sbjct: 137 GALQSIPRGDIEAADAYGLTGWSRFRKVMWPTTMRLAWPAYTNEAIFLFHATTLVFVSGF 196

Query: 347 ------ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                  D +     + ++T        I  F ++ L+++I  F   +N ++
Sbjct: 197 PAWRQKGDALYYAKYLADKTFNPFVPYPILAFYFILLTLVIIFFFGLINKRL 248


>gi|210135129|ref|YP_002301568.1| amino acid ABC transporter [Helicobacter pylori P12]
 gi|210133097|gb|ACJ08088.1| amino acid ABC transporter [Helicobacter pylori P12]
          Length = 237

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 13/200 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   ++ IV++L      +HF  +   A    Y+S  LI G P LV I + +   +  P
Sbjct: 47  FILGLLIAIVVALIKIAPPKHFIHRALLAGVNFYVS--LIRGTPLLVQIVVVF---YGLP 101

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL + +
Sbjct: 102 ALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLNYLQ 153

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+  QA++   P L++ +++L K +SL   V  A++  +     N +   + I L 
Sbjct: 154 TFWHVIFFQALKVATPSLSNTFISLFKETSLTSVVTIAEVFRIAQQKANASYDFLPIYLE 213

Query: 370 WMFIYLSLSIMIALFMNRLN 389
              IY    +++     R+ 
Sbjct: 214 AALIYWLFCLVLEAVQKRME 233


>gi|71083898|ref|YP_266618.1| octopine-like transport system permease protein oocM [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|91763031|ref|ZP_01264995.1| octopine-like transport system permease protein oocM [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|71063011|gb|AAZ22014.1| octopine-like transport system permease protein oocM [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|91717444|gb|EAS84095.1| octopine-like transport system permease protein oocM [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 224

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 66/125 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +  T A+ +EI+RS    +  G +EA  +LG++ +     + +P A+R  +P   ++
Sbjct: 100 IAFALNTGAYTSEILRSAFQTIKPGIIEAGKSLGISSKIILYKIQIPVAIRQSLPAYGNE 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K +SLA  V   D+  V   I++ T + +E+ L+   IYL ++ +    +  L  
Sbjct: 160 IILMMKGTSLASTVTLMDITGVAKHIVSTTYKPLEVFLLAGGIYLFMTFIFHNLIKYLEK 219

Query: 391 KIALK 395
           K + +
Sbjct: 220 KYSFQ 224


>gi|227820463|ref|YP_002824434.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339462|gb|ACP23681.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 234

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 59/104 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I ++   AA+  EI+R+G+ A+ + Q+EA  ALG T  +  R V++  A+  + P L SQ
Sbjct: 95  IGMTINLAAYSTEIIRAGIEAIHKSQIEAGEALGFTRFQIYRHVIIVPAIAKVYPALCSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++ ++  SS+  A+   +L +    I +QT ++ EI +    IY
Sbjct: 155 FVLMMLASSICSAISTQELAASAAFIESQTYRSFEIYIAVTLIY 198


>gi|260904764|ref|ZP_05913086.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Brevibacterium linens BL2]
          Length = 263

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 59/124 (47%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+    A+ AE+VRS +  V +GQ E AIAL L+  +    V+ PQA   +IP L +  
Sbjct: 94  ALALNYGAYSAEVVRSSIKTVDKGQWEGAIALSLSPTRRMVRVIFPQAWALMIPSLATLL 153

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + LLK +++   +   DL      +   T        I + IY  ++ +I   MN L  +
Sbjct: 154 IQLLKGTAVVSFITLQDLTEKIDQLRQSTNDTYFAFTIGLIIYFVIAWLIQEGMNFLERR 213

Query: 392 IALK 395
              K
Sbjct: 214 ATAK 217


>gi|298290178|ref|YP_003692117.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926689|gb|ADH87498.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 220

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +L   ++   A ++AE  R GL AVP  Q+ AA +LG+   +A RL+++PQ  R + 
Sbjct: 89  SFPALLAGITFNNAGYLAETFRGGLRAVPPTQVRAARSLGMGQIQAFRLIVMPQMFRVVF 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P+T+Q +  +  +SL V VG   DL  V   +  ++ +  E   +   IY  L+ ++ L
Sbjct: 149 YPMTNQMVWAILMTSLGVIVGLNNDLTGVTQELNVRSFRTFEYFALAAVIYYLLAKLVTL 208


>gi|242239984|ref|YP_002988165.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132041|gb|ACS86343.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 238

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIRSVPYGEIEAARAYGFSRFKQYRSIILPGALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA  V   D++ +   I   T +      I   +YL++S ++++LF
Sbjct: 167 VILMLHSTALAFTVTVPDILKITRDINAATYKPFHAFGIAAVMYLAISFVLVSLF 221


>gi|239816641|ref|YP_002945551.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239803218|gb|ACS20285.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 218

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 7/129 (5%)

Query: 243 QLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +L  + P + Q  FI       G  ++PE  S+ IA+     A+  EI+R+G+ A P+GQ
Sbjct: 60  ELIRNTPFIVQLFFIFFGLPAAGVKLTPEVASI-IAMVMNLGAYSTEIIRAGIEATPKGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA++L L   +    V+LP A++ + P + SQ + ++  S++   +   +L      I
Sbjct: 119 IEAAVSLALDKVQVFTRVVLPPALKKVWPAMVSQIIIVMLGSAVCGQISTEELSYAANLI 178

Query: 357 INQTGQAIE 365
            ++  +A E
Sbjct: 179 QSRNFRAFE 187


>gi|190895199|ref|YP_001985492.1| nopaline ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700860|gb|ACE94942.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 221

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 27/174 (15%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +F  S +LG +L L    L R+    +  A    Y  T +I G+P L++I L Y      
Sbjct: 18  VFFLSCMLGTILGLLIAIL-RNSPRTSIAACMRAY--TGVIRGVPELLIILLMY------ 68

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAA----------FIAEIVRSGLIAVPRGQME 298
                    GG+ +    +  YI ++ + A           + AEI R  + AV  GQ E
Sbjct: 69  --------FGGTALLTAAVGRYIEINAFAAGVTALTVVFSGYAAEIFRGAINAVAPGQRE 120

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           AAIALGL+  +   L+++PQ +   +P   +  ++L+K++SL   VG  D++ V
Sbjct: 121 AAIALGLSRWQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLISVVGLTDVMRV 174


>gi|91781144|ref|YP_556351.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693804|gb|ABE37001.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 247

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL--VLLPQAMRSI 323
           F  + + LS +  AF AE +R+G  A+P   +E A ALG    +ATR   + LP A R+ 
Sbjct: 114 FFWVVLVLSLHKGAFHAEALRAGFDALPAQTLEGAAALGFD--RATRFWRIELPLAFRTA 171

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +P L + ++ L+K S+LA A+   D+      I  Q    + ++++
Sbjct: 172 LPALVNNFVELVKASALASAIAVGDITYQSIMIWTQRDNVLALMIL 217


>gi|293605309|ref|ZP_06687695.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292816365|gb|EFF75460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 245

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG+ ++P F  + I ++ +   F AE +R+G+ AVP   +EAA +L L+ R+    V LP
Sbjct: 105 GGNPITP-FAWVVIVVALHKGVFHAEALRAGIEAVPAVTLEAARSLALSRRQTLMQVQLP 163

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+R  +P L +  ++L+K +++A A+   D+
Sbjct: 164 LAVRFALPALINNLVDLVKMTAIASAIAVGDV 195


>gi|260770436|ref|ZP_05879369.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii CIP 102972]
 gi|260615774|gb|EEX40960.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii CIP 102972]
          Length = 222

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 3/124 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+     A+ AEI+R+G+ A P+GQ EA   LGLT  +    +++P A + + P L SQ
Sbjct: 95  IAMVINLGAYSAEIIRAGIEATPKGQWEAGKTLGLTRMQIFTRIVIPPAYQRVYPALVSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA---LFMNR 387
            + ++  S++   +   DL      + +++  + E  ++   IYL L+I++     F+ R
Sbjct: 155 CIIVMLGSAVVSQISVEDLTFAANFVQSRSFLSFESYMLTAAIYLVLAIVMRQMFAFVKR 214

Query: 388 LNAK 391
           ++ K
Sbjct: 215 VSFK 218



 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 70  FEID-QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           +++D  G+ PY          + G   T  L     +   ++GTL    + S  K + ++
Sbjct: 3   YQLDFSGLTPYLPQ------FVAGLGTTVELTIISTVGGLLLGTLCAGAKTSQAKWLKFV 56

Query: 129 CRVYVEVFRNIPPLVVIFFLY 149
           C  Y+EV RN P +V +FF++
Sbjct: 57  CTCYIEVIRNTPFIVQLFFIF 77


>gi|227820382|ref|YP_002824353.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339381|gb|ACP23600.1| probable amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 223

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  IA+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  ++  I 
Sbjct: 89  ELQAANIAMVVNLGAYSCEIIRAGIQATPKGQFEAGSSLAMTPFETFRHVVLIPSLERIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  S++   +   DL      I ++T +A E  ++   +YL L+I++
Sbjct: 149 PALSSQVVIVMLGSAVVSQIAAEDLTFAANFIQSRTFRAFEAYMVSTAVYLLLAILL 205


>gi|170699698|ref|ZP_02890734.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170135398|gb|EDT03690.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 255

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    +ALS    A++A I+R  +  VP G++EA  A G+T     R ++ P+A R  +P
Sbjct: 101 FWYAVVALSVNEGAYVATILRGAIAGVPAGEIEAGYAYGMTRAGVLRRIVGPRAWRLALP 160

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            LT + + LLK++ LA  V   D++    T+  +T
Sbjct: 161 ALTGEAILLLKSTVLASTVTVFDVMGTANTLRFET 195


>gi|331007419|ref|ZP_08330600.1| ABC transporter, membrane spanning protein (amino acid) [gamma
           proteobacterium IMCC1989]
 gi|330418769|gb|EGG93254.1| ABC transporter, membrane spanning protein (amino acid) [gamma
           proteobacterium IMCC1989]
          Length = 156

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 5/91 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +QL F K  LG F     S     +  ++IAL+  TA ++AE  + G  AVP  Q+ AA 
Sbjct: 71  FQLFFFKFGLGAFGIFIES-----YFVVFIALAFNTAGYMAENFKGGFNAVPPTQLRAAR 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +LG+T  +    +++PQ MR I  P+T+Q++
Sbjct: 126 SLGMTFFQTQLYIIVPQVMRIIYHPMTNQFI 156


>gi|208434842|ref|YP_002266508.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           G27]
 gi|208432771|gb|ACI27642.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           G27]
          Length = 229

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 17/201 (8%)

Query: 193 SFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           SF+LG+ +++    +     +HF  K   A    Y+S  LI G P LV I + +   +  
Sbjct: 38  SFILGLFIAVMVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---YGL 92

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P LG +       + P    + IA S    A+ +E +R+  + VP+ Q +++++LGL + 
Sbjct: 93  PALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLFVPKDQWDSSLSLGLNYL 144

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I L
Sbjct: 145 QTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPIYL 204

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
               IY    +++ +   R+ 
Sbjct: 205 EAALIYWLFCLVLEVIQKRVE 225


>gi|319899030|ref|YP_004159123.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
 gi|319402994|emb|CBI76549.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
          Length = 235

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 51/84 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ AEI R  L+AV   Q EA+ ALGL+       ++LPQAM + + PL ++++ + K
Sbjct: 116 SAAYQAEIFRGSLLAVATEQREASKALGLSRSITFFKIILPQAMVTALRPLGNEFILMTK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +S++A  V   DL+     I ++T
Sbjct: 176 SSTIASLVTVYDLMGTTKLIYSRT 199



 Score = 36.2 bits (82), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y+  ++ GF+ T  L         ++G L+   RLS NK++ ++ R Y+  FR+ P L
Sbjct: 16  SRYSLKLIDGFIVTLKLVSISCSMGLLLGILITFIRLSNNKILQYLARAYIYFFRSSPLL 75

Query: 143 VVIFFLY 149
             +F  Y
Sbjct: 76  AQLFLFY 82


>gi|312883552|ref|ZP_07743277.1| ABC transporter permease [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368775|gb|EFP96302.1| ABC transporter permease [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 225

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 11/186 (5%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG+ + L   R S H+    G +   +Y       G P LV      QL+     + QF 
Sbjct: 32  LGVAIPLAVARNSEHYF-LFGPSWAFIYFFR----GTPLLV------QLYLIYYGMDQFF 80

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  +     +    +A    T+A+ AEI+R  +  +P+G++EAA A G+      + ++
Sbjct: 81  PVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPQGEVEAAKAYGMGSFMTYKRII 140

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LP A+R  +P  +++ + +L  S++A  V   DL      + ++     E  L     Y+
Sbjct: 141 LPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAPFESFLTAGLFYM 200

Query: 376 SLSIMI 381
           +L+ +I
Sbjct: 201 ALTFII 206


>gi|170767520|ref|ZP_02901973.1| histidine ABC transporter, permease protein HisM [Escherichia
           albertii TW07627]
 gi|170123854|gb|EDS92785.1| histidine ABC transporter, permease protein HisM [Escherichia
           albertii TW07627]
          Length = 238

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K    ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYHCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|187927128|ref|YP_001897615.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|309780169|ref|ZP_07674920.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|187724018|gb|ACD25183.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|308920872|gb|EFP66518.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 244

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 52/92 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+I EIVR+G+   PRGQ+EAA AL ++     R V+L  A++ + P L+SQ + ++  
Sbjct: 102 GAYITEIVRAGIQETPRGQLEAANALAMSRWAVFRHVVLRPALQKVWPALSSQIVIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +S+   +   DL      I ++  +A E  L+
Sbjct: 162 TSVVSQIAAQDLTFAANFIQSRNFRAFETYLV 193


>gi|308186224|ref|YP_003930355.1| Arginine transport system permease protein artQ [Pantoea vagans
           C9-1]
 gi|308056734|gb|ADO08906.1| Arginine transport system permease protein artQ [Pantoea vagans
           C9-1]
          Length = 238

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 94/186 (50%), Gaps = 10/186 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVL-IALKYQLHFDK---PVLGQF-NFIGGSTVSPEFMSLYI 271
           + LP + +  F+ FG   L+L ++  + L+F     PV  Q  NF     VSP F+   I
Sbjct: 55  RGLPEILVVLFIYFGASQLLLTLSDGFTLNFGLFTLPVQIQIENF----DVSP-FLCGVI 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   AA+ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+
Sbjct: 110 ALAMLYAAYASQTLRGALKAVPVGQWESGQALGMKKSAIFLRLIMPQMWRHALPGLGNQW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L LLK+++L   +   DL+    +I  +T +     L+   IYL +++     + R+  +
Sbjct: 170 LVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWFLVAAAIYLVITLFSQAVLRRIELR 229

Query: 392 IALKEK 397
               E+
Sbjct: 230 TTRFER 235


>gi|91778289|ref|YP_553497.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690949|gb|ABE34147.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 220

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L  Y +A+ AE  RSG  +VP G +EAA  LGLT  +A   + +PQ +  I+P LT+ 
Sbjct: 94  LGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLGLTRWQAVLRIQVPQMLVLIVPALTNL 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            + L K +++   V   +L  V   I + T   +E +L+    YL+L
Sbjct: 154 IIVLSKETAVLSIVTVPELTFVLTGIGSATFAFVETLLVLCVCYLAL 200


>gi|320546923|ref|ZP_08041225.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus equinus ATCC 9812]
 gi|320448441|gb|EFW89182.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus equinus ATCC 9812]
          Length = 215

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 8/133 (6%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y L++  P +G         V P  +   + L     +++AE  RSGL AV + Q E  +
Sbjct: 59  YFLYYGLPKVG--------VVLPSELCAIVGLIFLGGSYMAESFRSGLEAVSKRQYEVGL 110

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ++GL+H +    V+LPQA+   +P L +  + L+K +S    V  ADL+ +   +I    
Sbjct: 111 SIGLSHLQNVFYVILPQAIAVALPSLVANIIFLVKETSFFSIVALADLMYIAKDLIGLYY 170

Query: 362 QAIEIILIWMFIY 374
           +  E +L+ +  Y
Sbjct: 171 ETDEALLMLVVAY 183



 Score = 40.4 bits (93), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           V T  LA  G++ A I+G  +   +     +++ IC++Y+E+ RN P L+ ++FLY    
Sbjct: 7   VLTIRLALFGILGAIILGFFISLIKYYNVAILSQICQIYIELSRNTPLLIQLYFLYYG-- 64

Query: 154 SVLPIPDHSIVLP 166
               +P   +VLP
Sbjct: 65  ----LPKVGVVLP 73


>gi|298293524|ref|YP_003695463.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930035|gb|ADH90844.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 223

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 63/122 (51%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ Y  A+ +EI R+G ++VP GQ+EAA  +G++     R V LPQ +  I+P L +  
Sbjct: 94  GLALYGGAYFSEIFRAGFLSVPVGQIEAARIMGISRLSIVRHVQLPQMLVIILPALANMT 153

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L K +++   +   +L SV  +I + T    E +L    +Y +   ++     RL  +
Sbjct: 154 VLLSKETAVLSVITVNELTSVIQSIGSTTFAFAETLLFLALVYWAFLEIVTAAARRLEKR 213

Query: 392 IA 393
           + 
Sbjct: 214 VG 215


>gi|298290459|ref|YP_003692398.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926970|gb|ADH87779.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 224

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 63/117 (53%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A P+GQ EA  +LG++  +    V+L  A++ I 
Sbjct: 89  ELEAANLAMVVNLGAYGCEIIRAGIQATPKGQFEAGASLGMSRIQTFWHVVLVPALQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  S+    +   DL      I ++T +A E   +   IYL+L+I +
Sbjct: 149 PALSSQIVIVMLGSAAVSQIATEDLTFAANFIQSRTFRAFEAYFVSTLIYLALAIAL 205


>gi|294636989|ref|ZP_06715311.1| arginine ABC transporter, permease protein ArtQ [Edwardsiella tarda
           ATCC 23685]
 gi|291089817|gb|EFE22378.1| arginine ABC transporter, permease protein ArtQ [Edwardsiella tarda
           ATCC 23685]
          Length = 238

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 62/117 (52%)

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP+GQ EA +ALGL+       +++PQ  R  +P L +Q+L LLK+++L 
Sbjct: 120 SQTLRGALKAVPQGQREAGMALGLSKTHIFFRLVMPQMWRHALPGLGNQWLVLLKDTALV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   DL+    +I  +T +      +   IYL ++++    +  + ++    E+ 
Sbjct: 180 SLISVNDLMLQTKSIATRTQEPFTWYCVAAAIYLLITLLSQSVLKHIESRTTRFERS 236


>gi|163792482|ref|ZP_02186459.1| hypothetical protein BAL199_16583 [alpha proteobacterium BAL199]
 gi|159182187|gb|EDP66696.1| hypothetical protein BAL199_16583 [alpha proteobacterium BAL199]
          Length = 238

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   + A+  E++R  ++AVP GQ+EAA A G++     R +L+PQ  R  +P L + 
Sbjct: 110 IALGTVSGAYSTEVIRGAVLAVPAGQIEAARACGMSGWLLFRRILVPQVARYALPGLGNV 169

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           +   LK++SL   VG  +++
Sbjct: 170 WQLTLKDTSLISIVGLVEIM 189


>gi|262191302|ref|ZP_06049495.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|262032798|gb|EEY51343.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
          Length = 225

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 59/105 (56%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++  +  + ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ +I
Sbjct: 162 GSAVAGIVTIMDLTGAARLVNSRYYAPFEAFLSAGLFYMALTFII 206


>gi|261838312|gb|ACX98078.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           51]
          Length = 237

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++    +     +HF  K        Y+S  LI G P LV I + +   +
Sbjct: 44  IISFILGLFIAVLVALIKIAPPKHFIHKALLVGVNFYVS--LIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNIFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233


>gi|55821010|ref|YP_139452.1| amino acid ABC uptake transporter membrane-spanning protein,
           truncated [Streptococcus thermophilus LMG 18311]
 gi|55822929|ref|YP_141370.1| ABC transporter permease, truncated [Streptococcus thermophilus
           CNRZ1066]
 gi|55736995|gb|AAV60637.1| amino acid ABC uptake transporter membrane-spanning protein,
           truncated [Streptococcus thermophilus LMG 18311]
 gi|55738914|gb|AAV62555.1| ABC transporter permease protein, truncated [Streptococcus
           thermophilus CNRZ1066]
          Length = 137

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 11/98 (11%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV++   + L+F  P +G           P  +   I  S  +AA++AEI RS + 
Sbjct: 37  GVPMLVVL---FILYFGLPYVG--------IQIPALLCAIIGFSTVSAAYMAEIFRSSIS 85

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           AV +GQ EAA +LGL  +     ++LPQA+R  + PL 
Sbjct: 86  AVDKGQWEAAQSLGLPQKPIIHHIILPQALRIAVAPLA 123


>gi|296103994|ref|YP_003614140.1| histidine/lysine/arginine/ornithine transport system permease
           protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058453|gb|ADF63191.1| histidine/lysine/arginine/ornithine transport system permease
           protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 228

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 14/133 (10%)

Query: 226 TFLIFGLPTLVLIALK-YQLHF------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI G+P LVL+ L  Y L        D   +GQ +      + P    + I L     
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNSVTDAMGMGQID------IDPMVAGI-ITLGFIYG 105

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK +
Sbjct: 106 AYFTETFRGAYMAVPKGHIEAATAYGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKAT 165

Query: 339 SLAVAVGFADLVS 351
           +L   +G  D+V 
Sbjct: 166 ALVSLLGLEDVVK 178



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            ++  IL G + T  LA S ++ A +IG L GAG +LSANK +A I   Y  + R +P L
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVLIG-LAGAGAKLSANKPLALIFEGYTTLIRGVPDL 62

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V++  ++      L I  +S+    GM
Sbjct: 63  VLMLLIFYG----LQIALNSVTDAMGM 85


>gi|319778836|ref|YP_004129749.1| Histidine ABC transporter, permease protein HisM [Taylorella
           equigenitalis MCE9]
 gi|317108860|gb|ADU91606.1| Histidine ABC transporter, permease protein HisM [Taylorella
           equigenitalis MCE9]
          Length = 243

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 14/179 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQ----LHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +++ T++  G P  + + L Y     L F K  PVL  F F G       F  + +A + 
Sbjct: 65  IWVFTYVFRGTPLYIQLLLIYSGFISLEFVKNTPVLHNFFFSG-------FNCVILAFTL 117

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A+  EI    + + P G++EA  A G++  +  + ++LP A+R  +P  +++ + +L
Sbjct: 118 NTLAYTIEIFAGYIKSTPSGEIEAGRAYGMSKPQIYKRIILPSALRRALPAYSNEVILML 177

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            ++++A      D++ V    +N T   +    +   IY+ +S +I +++ RL  + AL
Sbjct: 178 HSTTIAFTATVPDILKVARDAMNDTYLTMASYTVAAVIYMVMSFVI-VWIFRLIERRAL 235


>gi|304405838|ref|ZP_07387496.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304345081|gb|EFM10917.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 230

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I ++VRS + ++PR Q E ++A+GLT R+    VLLPQ +    P + S    L+K +SL
Sbjct: 105 IGDLVRSFITSLPRHQFETSMAIGLTRRQMYAHVLLPQIIIRTTPSIVSLATRLIKTTSL 164

Query: 341 AVAVGFADLVSVGGTIIN 358
              +G  +++ V   II 
Sbjct: 165 VSLIGVQEMLKVSQNIIQ 182


>gi|15964314|ref|NP_384667.1| putative transport system permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307307050|ref|ZP_07586789.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15073491|emb|CAC45133.1| Putative transport system permease ABC transporter [Sinorhizobium
           meliloti 1021]
 gi|306901990|gb|EFN32589.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 274

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   AA+  E++R     VP G++EAA A G+      R + LP+A+   +P L  + 
Sbjct: 149 ALTVSFAAYEGEVMRGAFAGVPSGELEAARAYGMGRWTMFRRIWLPRAIHRALPTLNGET 208

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL----FMNR 387
           +  LK++ L   +   D+ +V   +  +T    E +L+   IY+ L+ ++ +    F NR
Sbjct: 209 VLQLKSTPLVATITVVDVYAVISKVRQETYLTYEPLLLLAAIYMCLTAILVVAFRYFENR 268

Query: 388 LNAKIA 393
           +  + A
Sbjct: 269 IPTRGA 274


>gi|148989075|ref|ZP_01820475.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147925572|gb|EDK76649.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
          Length = 206

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 44/212 (20%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 11  SFLLGLIVSII-----RHYRILVLSQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV--- 62

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L  +        F+GGS                   ++AE  RSGL A+ + Q E  +
Sbjct: 63  --LSSEVCATLGLVFLGGS-------------------YMAESFRSGLEAISQTQQEIGL 101

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--- 358
           A+GLT  +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    
Sbjct: 102 AIGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYY 161

Query: 359 QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 162 ETDIALAMLVVAYLIMLLPISLVFSWIERRLR 193


>gi|15900609|ref|NP_345213.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|111658698|ref|ZP_01409341.1| hypothetical protein SpneT_02000206 [Streptococcus pneumoniae
           TIGR4]
 gi|14972185|gb|AAK74853.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|301793879|emb|CBW36274.1| putative amino-acid ABC transporter integral membrane protein
           [Streptococcus pneumoniae INV104]
          Length = 206

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 48/214 (22%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 11  SFLLGLIVSII-----RHYRILVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV--- 62

Query: 242 YQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                   V       F+GGS                   ++AE  RSGL A+ + Q E 
Sbjct: 63  ----LSSEVCATLGLVFLGGS-------------------YMAESFRSGLEAISQTQQEI 99

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN- 358
            +A+GLT  +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 100 GLAIGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGL 159

Query: 359 --QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
             +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 160 YYETDIALAMLVVAYLIMLLPISLVFSWIERRLR 193


>gi|229515241|ref|ZP_04404701.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229347946|gb|EEO12905.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
          Length = 225

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 59/105 (56%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++  +  + ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ +I
Sbjct: 162 GSAVAGIVTIMDLTGAARLVNSRYYAPFEAFLSAGLFYMALTFII 206


>gi|205355342|ref|ZP_03222113.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205346576|gb|EDZ33208.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 218

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   +++PQAMR + P   + 
Sbjct: 92  IVFSIWGCFEMMDLVRVSLQSIPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  L   I L+  
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSR 211

Query: 387 RLNAK 391
           +L  K
Sbjct: 212 KLEKK 216


>gi|114764749|ref|ZP_01443932.1| ABC amino acid transporter, inner membrane subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114542798|gb|EAU45820.1| ABC amino acid transporter, inner membrane subunit [Roseovarius sp.
           HTCC2601]
          Length = 220

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 67/127 (52%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +ALS + + F  E  R+GL +V +    A+ +LGL        V+LP A RS +P
Sbjct: 87  FWSGVVALSLWASVFHIESFRAGLSSVSKDIRNASASLGLRRWHHGLFVVLPIAARSALP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  ++ +KNS+   A+G  +L  V    I    ++IE+ L    IYL++ ++++   
Sbjct: 147 STLNTIVSTIKNSAYLQAIGLVELTFVAVDRIAYEFRSIEMFLSICVIYLAVVLVVSTLG 206

Query: 386 NRLNAKI 392
           +RL  ++
Sbjct: 207 HRLERRL 213


>gi|304415311|ref|ZP_07395996.1| permease component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
 gi|304282829|gb|EFL91307.1| permease component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
          Length = 509

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 56/99 (56%)

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP GQ E+A ALGL+  +    +++PQ  R  +P L +Q+L LLK+++L 
Sbjct: 391 SQTLRGALKAVPIGQWESAQALGLSQSRIFFRLIMPQMWRHALPGLGNQWLVLLKDTALV 450

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
             +   DL+     I  +T +      I   +YL+++++
Sbjct: 451 SLISVNDLMLQTKNIATRTQEPFTWYCIVALVYLAITLL 489


>gi|256825960|ref|YP_003149920.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
 gi|256689353|gb|ACV07155.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
          Length = 245

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 1/118 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+VR  L AVP+GQ E   AL +++  A R V+ PQA   ++P L +  + L+K 
Sbjct: 101 GAYGAEVVRGSLKAVPKGQWETTTALSMSYPTALRRVIWPQAWALMLPGLNNLAVMLVKG 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++LA  +   D+  V      +T    E   +   +YL++++  + F+  L  +   K
Sbjct: 161 TALASLILLTDITEVADR-ARRTMSTYEAFGVAAVLYLAIALAFSAFLRWLEVRAHRK 217


>gi|15964315|ref|NP_384668.1| putative transport system permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307307051|ref|ZP_07586790.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15073492|emb|CAC45134.1| Amino-acid ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|306901991|gb|EFN32590.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 241

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 14/186 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFD--KPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           LL   T ++  +P LVLI L Y    D    +LG    +G   +S     +++ +     
Sbjct: 62  LLECYTTVVRAVPELVLILLLYYAGTDLLNQLLGAIG-VGAVDISGLVAGIFV-IGVVQG 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  + AVP GQ+EAA A G++     R + LP  +   IP L + +L   K++
Sbjct: 120 AYSTEVLRGAIKAVPAGQIEAARAYGMSPLLVLRRITLPAMLPYAIPGLANLWLIATKDT 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF----IYLSLSIMIALFMNRL--NAKI 392
           +L   VGF++L      +  Q   A +  L++      +YL+L+++  +F+  L  +A+ 
Sbjct: 180 ALLAVVGFSELT----LVTRQAAGATKAYLLFFCAAGALYLALTLVSNVFIGMLERHARR 235

Query: 393 ALKEKK 398
              E++
Sbjct: 236 GFAEQR 241


>gi|15641863|ref|NP_231495.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121587301|ref|ZP_01677073.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121727112|ref|ZP_01680286.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147674940|ref|YP_001217395.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153213068|ref|ZP_01948606.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|153818853|ref|ZP_01971520.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153823969|ref|ZP_01976636.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|153825190|ref|ZP_01977857.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|153830548|ref|ZP_01983215.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|183179516|ref|ZP_02957727.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227081990|ref|YP_002810541.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229508042|ref|ZP_04397547.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229511719|ref|ZP_04401198.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229518857|ref|ZP_04408300.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229520321|ref|ZP_04409747.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229523880|ref|ZP_04413285.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229529116|ref|ZP_04418506.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229607589|ref|YP_002878237.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254226031|ref|ZP_04919630.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|254286780|ref|ZP_04961734.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|254848947|ref|ZP_05238297.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255745379|ref|ZP_05419328.1| histidine ABC transporter permease protein HisM [Vibrio cholera
           CIRS 101]
 gi|262153518|ref|ZP_06028647.1| histidine ABC transporter permease protein HisM [Vibrio cholerae
           INDRE 91/1]
 gi|262167418|ref|ZP_06035125.1| histidine ABC transporter permease protein HisM [Vibrio cholerae
           RC27]
 gi|297579379|ref|ZP_06941307.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|298498100|ref|ZP_07007907.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9656390|gb|AAF95009.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548461|gb|EAX58519.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121630490|gb|EAX62882.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|124116115|gb|EAY34935.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|125621414|gb|EAZ49749.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|126510581|gb|EAZ73175.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126518506|gb|EAZ75729.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|146316823|gb|ABQ21362.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|148873978|gb|EDL72113.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|149741169|gb|EDM55220.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|150423207|gb|EDN15154.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|183012927|gb|EDT88227.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227009878|gb|ACP06090.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227013759|gb|ACP09969.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229332890|gb|EEN98376.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229337461|gb|EEO02478.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229342687|gb|EEO07679.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229343546|gb|EEO08521.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229351684|gb|EEO16625.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229355547|gb|EEO20468.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229370244|gb|ACQ60667.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254844652|gb|EET23066.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255737209|gb|EET92605.1| histidine ABC transporter permease protein HisM [Vibrio cholera
           CIRS 101]
 gi|262024115|gb|EEY42809.1| histidine ABC transporter permease protein HisM [Vibrio cholerae
           RC27]
 gi|262030645|gb|EEY49280.1| histidine ABC transporter permease protein HisM [Vibrio cholerae
           INDRE 91/1]
 gi|297536973|gb|EFH75806.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297542433|gb|EFH78483.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|327484413|gb|AEA78820.1| Histidine ABC transporter, permease protein HisM [Vibrio cholerae
           LMA3894-4]
          Length = 225

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 59/105 (56%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+R  +  +P+G++EAA A G++  +  + ++LP A+R  +P  +++ + +L 
Sbjct: 102 TSAYTAEIIRGAINGLPKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLH 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            S++A  V   DL      + ++     E  L     Y++L+ +I
Sbjct: 162 GSAVAGIVTIMDLTGAARLVNSRYYAPFEAFLSAGLFYMALTFII 206


>gi|269102813|ref|ZP_06155510.1| arginine ABC transporter permease protein ArtM [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162711|gb|EEZ41207.1| arginine ABC transporter permease protein ArtM [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 224

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 22/217 (10%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           + T+ ++ V S  +G  L+L  T    L      +  K + +L+  T      P LV I 
Sbjct: 14  LGTSLQLTVVSLAVGCTLALLMTLSLILKTPVISQLNKGIIILFTGT------PLLVQIF 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L Y      P  GQF  +  S V      P F ++ +AL+  TAA+  ++ +    A+P 
Sbjct: 68  LVYY----GP--GQFEAVRNSFVWHWLSQPWFCAM-LALALNTAAYSTQLFKGAFNAIPS 120

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ  A  ALG+  R++   VLLP A+R  +P  +++ + + K +SLA  +   DL+    
Sbjct: 121 GQWLACRALGMNTRQSLG-VLLPFAIRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQ 179

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I  QT   + +  I   +YL ++ ++ L   ++  +
Sbjct: 180 RINGQTYDTLTVFGIAGAMYLLVNGILTLIFRQIEKR 216


>gi|163739219|ref|ZP_02146631.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387619|gb|EDQ11976.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 250

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 11/166 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKYQLH 245
           +I + +F +G+++ LF       + +  G  +   LL I T +I  +P LVLI + Y + 
Sbjct: 37  QIALGAFGMGLIIGLFGA-----YGKLYGGPILRDLLAIYTTVIRAVPELVLILILYYVG 91

Query: 246 FD--KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            D    V G   + G   +S     +++ L     A+  E++R  + AVP GQ+EAA + 
Sbjct: 92  TDLINKVAGSLGY-GRVEISGIVAGIWV-LGIVQGAYATEVLRGAIKAVPPGQIEAARSY 149

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           G+      R V +P  M    P L + +L   K+++L   VGFA+L
Sbjct: 150 GMPPFMTMRRVTIPAMMSFATPGLANLWLIATKDTALLAIVGFAEL 195


>gi|319947566|ref|ZP_08021796.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319746254|gb|EFV98517.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 268

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 70/135 (51%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  + + +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ +  R +++P A    
Sbjct: 121 PAHLFVIVAFAFNEAAYASETIRAAILSVDAGEIEAAKSLGMTNAQVYRRIIIPNAAVVA 180

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L +  + L K +SLA   G  ++ +    +     +  E  +    IY +++I+I  
Sbjct: 181 TPTLINSLIGLTKGTSLAFYAGVLEIFAQAKIMSGNDSRYFERFISVSLIYWAINILIEQ 240

Query: 384 FMNRLNAKIALKEKK 398
               +   +++K+ K
Sbjct: 241 LGRWIEQVLSIKDPK 255


>gi|330901550|gb|EGH32969.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 221

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 24/131 (18%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    F+ F LPTL                       G  VS  F S  IA++    A
Sbjct: 66  PLLIQLFFIYFALPTL-----------------------GIRVS-GFASAVIAMTFLGGA 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EI+R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK ++
Sbjct: 102 YLTEILRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETT 161

Query: 340 LAVAVGFADLV 350
           +  AV   +++
Sbjct: 162 VVSAVAVPEIL 172


>gi|86151862|ref|ZP_01070076.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|121612627|ref|YP_001000175.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|167005133|ref|ZP_02270891.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315124014|ref|YP_004066018.1| hypothetical protein ICDCCJ07001_428 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841491|gb|EAQ58739.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|87250458|gb|EAQ73416.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315017736|gb|ADT65829.1| hypothetical protein ICDCCJ07001_428 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 218

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   +++PQAMR + P   + 
Sbjct: 92  IVFSIWGCFEMMDLVRVSLQSIPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  L   I L+  
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSR 211

Query: 387 RLNAK 391
           +L  K
Sbjct: 212 KLEKK 216


>gi|322391022|ref|ZP_08064526.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142252|gb|EFX37726.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 266

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 68/123 (55%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+ +E +R+ +++V  G++EAA +LG+T+R+  R +++P A     P L + 
Sbjct: 128 VALAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNRQVYRRIIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K +SLA +      FA    VGG+ +    + I + +++  + + + I+      
Sbjct: 188 LIGLTKGTSLAFSASVVEIFAQARIVGGSDLKYFERFITVSIVYWIVNILIEILGRHIER 247

Query: 387 RLN 389
           RL+
Sbjct: 248 RLD 250


>gi|307320130|ref|ZP_07599550.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306894176|gb|EFN24942.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 274

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 4/126 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   AA+  E++R     VP G++EAA A G+      R + LP+A+   +P L  + 
Sbjct: 149 ALTVSFAAYEGEVMRGAFAGVPSGELEAARAYGMGRWTMFRRIWLPRAIHRALPTLNGET 208

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL----FMNR 387
           +  LK++ L   +   D+ +V   +  +T    E +L+   IY+ L+ ++ +    F NR
Sbjct: 209 VLQLKSTPLVATITVVDVYAVISKVRQETYLTYEPLLLLAAIYMCLTAILVVAFRYFENR 268

Query: 388 LNAKIA 393
           +  + A
Sbjct: 269 IPTRGA 274


>gi|238751270|ref|ZP_04612764.1| Histidine transport system permease protein hisM [Yersinia rohdei
           ATCC 43380]
 gi|238710544|gb|EEQ02768.1| Histidine transport system permease protein hisM [Yersinia rohdei
           ATCC 43380]
          Length = 214

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 1/117 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 83  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 142

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALFMN 386
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF +
Sbjct: 143 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLFRH 199


>gi|91781326|ref|YP_556533.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693986|gb|ABE37183.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 224

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 70/127 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ Y   ++AE++++ + AVP G +EA +A+G++  +  R ++ PQAM  ++P LT  
Sbjct: 93  VTLAFYYGPYVAEVIQAAIAAVPAGTIEAGVAIGMSPARIARRIIAPQAMPLLLPTLTGL 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K+S+L   +   + +     ++++T   +E+  +   +Y + + +I L       
Sbjct: 153 SIGLVKDSALLSMISVHEFMFAAKAVVSETYAPLEVYFVVALVYWAATSVIHLSTRHWER 212

Query: 391 KIALKEK 397
           ++   ++
Sbjct: 213 RLGRAQR 219


>gi|315181507|gb|ADT88420.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii NCTC 11218]
          Length = 222

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 61/111 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+     A+ AEI+R+G+ A P+GQ EA   LGLT  +    +++P A + + P L SQ
Sbjct: 95  IAMVINLGAYSAEIIRAGIEATPKGQWEAGKTLGLTRMQIFTRIVIPPAYQRVYPALVSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + ++  S++   +   DL      + +++  + E  ++   IYL L+I++
Sbjct: 155 CIIVMLGSAVVSQISVEDLTFAANFVQSRSFLSFESYMLTAAIYLVLAIVM 205



 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 70  FEID-QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           +++D  G+ PY          + G   T  L     +   ++GTL    + S  K + ++
Sbjct: 3   YQLDFSGLTPYLPQ------FVAGLGTTVELTIISTVGGLLLGTLCAGAKTSQAKWLKFV 56

Query: 129 CRVYVEVFRNIPPLVVIFFLY 149
           C  Y+EV RN P +V +FF++
Sbjct: 57  CTCYIEVIRNTPFIVQLFFIF 77


>gi|289672927|ref|ZP_06493817.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 192

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 24/131 (18%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    F+ F LPTL                       G  VS  F S  IA++    A
Sbjct: 66  PLLIQLFFIYFALPTL-----------------------GIRVS-GFASAVIAMTFLGGA 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EI+R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK ++
Sbjct: 102 YLTEILRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETT 161

Query: 340 LAVAVGFADLV 350
           +  AV   +++
Sbjct: 162 VVSAVAVPEIL 172


>gi|261839725|gb|ACX99490.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           52]
          Length = 229

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 17/188 (9%)

Query: 191 VFSFVLGIVLSLFATRLS----RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + SF+LG+ +++    +     +HF  K   A    Y+S  LI G P LV I + +   +
Sbjct: 36  IISFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P  G +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 91  GLPAFGVY-------IDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 143 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 202

Query: 367 ILIWMFIY 374
            L    IY
Sbjct: 203 YLEAALIY 210


>gi|167750528|ref|ZP_02422655.1| hypothetical protein EUBSIR_01504 [Eubacterium siraeum DSM 15702]
 gi|167656454|gb|EDS00584.1| hypothetical protein EUBSIR_01504 [Eubacterium siraeum DSM 15702]
          Length = 228

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S E  S+ I    +  A + ++VR  LI++P+ Q E++ ALGLT+ +    V++PQ
Sbjct: 90  GWDLSGEAASI-IVFVLWGTAEMGDLVRGALISIPKHQYESSEALGLTNAQTYLYVIIPQ 148

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +R +IP   +    ++K +SL + +G  +++ V   II 
Sbjct: 149 TIRRLIPLSINLITRMIKTTSLILMIGVVEVLKVAQQIIE 188


>gi|157414761|ref|YP_001482017.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|283955890|ref|ZP_06373380.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 1336]
 gi|157385725|gb|ABV52040.1| polar amino acid transport system permease protein [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792550|gb|EFC31329.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 1336]
 gi|307747400|gb|ADN90670.1| Amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315931091|gb|EFV10065.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 218

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   +++PQAMR + P   + 
Sbjct: 92  IVFSIWGCFEMMDLVRVSLQSIPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  L   I L+  
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSR 211

Query: 387 RLNAK 391
           +L  K
Sbjct: 212 KLEKK 216


>gi|300718307|ref|YP_003743110.1| Amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064143|emb|CAX61263.1| Amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 235

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 7/132 (5%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS Y   +++E++R   +AV RGQ +AA ++G T R+    ++ PQA+   +P   + 
Sbjct: 94  VGLSLYHGGYLSEVMRPAYLAVERGQHDAADSMGYTFRQKLTRIIGPQAVHIALPGYGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN------QTGQAIEIILIWMFIYLSLSIMIALF 384
            + L+ N +L + +G AD+++    I+       Q G  + + +I+  + L+  +++  F
Sbjct: 154 IIYLIHNVALVMYIGAADVMATAHLIMERDYNQYQFGTYLVLAVIYSLLCLAAWLIVRFF 213

Query: 385 MNRLNAKIALKE 396
             R +AK   K 
Sbjct: 214 EMR-HAKYTSKS 224


>gi|266626099|ref|ZP_06119034.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288861995|gb|EFC94293.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 234

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 8/122 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI--ALSCYTAAFIAEIVRSG 288
           G+PTLVLI L   L+   P   Q     G  +S    + YI  +LS  T+A +AE++R+ 
Sbjct: 66  GIPTLVLIFL---LYLGLP---QVMAALGVDLSGVSKTSYIIASLSLSTSANMAEMMRAA 119

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
            +AV +GQ EAA ++G+    A   ++ PQA    IP L +  + L K +SLA  VG  D
Sbjct: 120 YLAVEKGQREAAYSVGMKGSSAFFRIIFPQAFGIAIPMLGNNIILLFKETSLAFTVGVID 179

Query: 349 LV 350
           ++
Sbjct: 180 IL 181



 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 29/41 (70%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +IGTLV AG LS+++++  I + Y+   R IP LV+IF LY
Sbjct: 37  VIGTLVAAGALSSHRILGRISKGYISFMRGIPTLVLIFLLY 77


>gi|86360356|ref|YP_472244.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284458|gb|ABC93517.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 241

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 30/182 (16%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY----ISTFLIFGLPTLV 236
           +T+   A       VLG++++    +LS +         PLL     + T +  G+P L+
Sbjct: 24  MTLAVTATALAIGAVLGVIVA--GAKLSGN---------PLLVAFGNVYTTVFRGVPELL 72

Query: 237 LIALKYQLHFDKP--------VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +I   Y ++F            +G   F+G     P F +  +A+   + ++ AE+ R  
Sbjct: 73  II---YLIYFGGSSAVTSIGKAMGYEGFLG----LPSFAAGALAVGIISGSYQAEVFRGA 125

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
            +A+ +G++EAA A+G+      R +++PQ +R  IP L + +   LK+S+L    G A+
Sbjct: 126 YLAISKGELEAASAIGMHRGMRFRRIIIPQVLRFAIPGLGNVWQLSLKDSALISVTGLAE 185

Query: 349 LV 350
           L+
Sbjct: 186 LM 187



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 13/73 (17%)

Query: 90  LVGFVNTFWLAF-------------SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           L+GF +T W A              + +    ++G +V   +LS N L+     VY  VF
Sbjct: 6   LLGFGSTGWGALLILAALMTLAVTATALAIGAVLGVIVAGAKLSGNPLLVAFGNVYTTVF 65

Query: 137 RNIPPLVVIFFLY 149
           R +P L++I+ +Y
Sbjct: 66  RGVPELLIIYLIY 78


>gi|225025466|ref|ZP_03714658.1| hypothetical protein EIKCOROL_02364 [Eikenella corrodens ATCC
           23834]
 gi|224941750|gb|EEG22959.1| hypothetical protein EIKCOROL_02364 [Eikenella corrodens ATCC
           23834]
          Length = 222

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 48/80 (60%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + ++VR  L ++ + Q+E+A ALGL  R+    + LPQ+++  +P   + +  ++K SSL
Sbjct: 104 MGDLVRGALESIEKHQVESAKALGLNRRQVFWYIELPQSVQRALPGAINLFTRMVKTSSL 163

Query: 341 AVAVGFADLVSVGGTIINQT 360
           A  +G  ++V VG  II  +
Sbjct: 164 AALIGVVEVVKVGQQIIENS 183


>gi|330821192|ref|YP_004350054.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Burkholderia gladioli BSR3]
 gi|327373187|gb|AEA64542.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Burkholderia gladioli BSR3]
          Length = 223

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 11/127 (8%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ L Y   F  P         G  +SP   +  + L    +AF  EI  S + A
Sbjct: 71  MPQLVVLVLVY---FGLPY-------AGLRLSP-LATTVLGLGAVLSAFACEIFWSSIQA 119

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EAA+ALG    +    ++LPQA+R  IP LT++ + + K  +L  AV   +++ 
Sbjct: 120 LPRGQSEAALALGFGRWRTLFEIILPQAIRMSIPLLTNRAIAVSKGVALGTAVALPEVLG 179

Query: 352 VGGTIIN 358
              +++ 
Sbjct: 180 QAQSLVG 186


>gi|325686938|gb|EGD28962.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 286

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 103 RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 150

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ ++AV  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 151 NEAAYASETIRAAILAVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 210

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 211 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 256


>gi|238788678|ref|ZP_04632470.1| Histidine transport system permease protein hisM [Yersinia
           frederiksenii ATCC 33641]
 gi|238723273|gb|EEQ14921.1| Histidine transport system permease protein hisM [Yersinia
           frederiksenii ATCC 33641]
          Length = 212

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 81  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 140

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 141 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLF 195


>gi|183603450|ref|ZP_02717005.2| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|183576997|gb|EDT97525.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
          Length = 418

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 23/220 (10%)

Query: 156 LPIPDHSIVLPFGMFLNN--RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           LP+ D  I + F    NN  R L    +T+  +    + S + G V+ +  T      H 
Sbjct: 192 LPMQDSGIQVLFQG--NNLLRILQGLGVTIGISILSVLLSMMFGTVMGIIMTS-----HS 244

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIA 272
           +  + L  LY+    I  +P LVL+ + Y       +   FN  I G T      S  I 
Sbjct: 245 RIIRFLTRLYLEFIRI--MPQLVLLFIVY-----FGLARNFNINISGET------SAIIV 291

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            + +  A + ++VR  + ++P+ Q E+  +LGLT+ +    +++PQ +R ++P   +   
Sbjct: 292 FTLWGTAEMGDLVRGAITSLPKHQFESGQSLGLTNVQLYYHIIIPQVLRRLLPQAINLVT 351

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++K +SL V +G  ++  VG  II+     I     W++
Sbjct: 352 RMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIY 391



 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 48/213 (22%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+++S+      RH+           + +  +  PLL    FL FGLP + ++   
Sbjct: 11  SFLLGLIVSII-----RHYRILVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV--- 62

Query: 242 YQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                   V       F+GGS                   ++AE  RSGL A+ + Q E 
Sbjct: 63  ----LSSEVCATLGLVFLGGS-------------------YMAESFRSGLEAISQTQQEI 99

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN- 358
            +A+GLT  +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 100 GLAIGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGL 159

Query: 359 --QTGQAIEIILI-WMFIYLSLSIMIALFMNRL 388
             +T  A+ ++++ ++ + L +S++ +    RL
Sbjct: 160 YYETDIALAMLVVAYLIMLLPISLVFSWIERRL 192


>gi|238797418|ref|ZP_04640917.1| Histidine transport system permease protein hisM [Yersinia
           mollaretii ATCC 43969]
 gi|238718689|gb|EEQ10506.1| Histidine transport system permease protein hisM [Yersinia
           mollaretii ATCC 43969]
          Length = 227

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 96  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 156 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLF 210


>gi|238924363|ref|YP_002937879.1| putative ABC-type polar amino acid transport system, permease
           protein [Eubacterium rectale ATCC 33656]
 gi|238876038|gb|ACR75745.1| predicted ABC-type polar amino acid transport system, permease
           protein [Eubacterium rectale ATCC 33656]
 gi|291525137|emb|CBK90724.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium rectale DSM 17629]
 gi|291529374|emb|CBK94960.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium rectale M104/1]
          Length = 218

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 1/115 (0%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A + + I R G+  VP GQ EA   LG+T ++    + L Q ++ ++PP++++ + L+K+
Sbjct: 101 ACYFSVIFRGGIEGVPAGQREAGQVLGMTKQQIFFKITLLQMIKRVVPPMSNEIITLVKD 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +SLA  +   +L   G   +   G    +    +F YL    ++ L  N +  K+
Sbjct: 161 TSLARIIAAYELTFAGAAFMKSDGLTWPLFYTGVF-YLVFVGILTLLFNYIEKKL 214


>gi|319758451|gb|ADV70393.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis JS14]
          Length = 219

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 46/73 (63%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A + +T   +AEI+R GL A+  GQ EA ++ G T  +    +++PQA+R ++P + SQ 
Sbjct: 90  AFTIFTTPAMAEIIRGGLNAIGPGQTEAGLSQGFTPVQIMVYIIMPQAIRKMLPAIISQI 149

Query: 332 LNLLKNSSLAVAV 344
           + ++K++S   +V
Sbjct: 150 VTVIKDTSFLYSV 162


>gi|296111385|ref|YP_003621767.1| putative amino acid ABC transporter, permease protein [Leuconostoc
           kimchii IMSNU 11154]
 gi|295832917|gb|ADG40798.1| putative amino acid ABC transporter, permease protein [Leuconostoc
           kimchii IMSNU 11154]
          Length = 240

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 53/89 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   A+ +AE+ +S  ++V  GQ EAA+ +GL+  ++   V LPQ +   +P   + 
Sbjct: 102 IALSLLFASNLAEVFKSAYLSVDGGQREAALMVGLSEWQSFYRVTLPQTIVVALPNFANT 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
              L+K+++LA  +G  D++  G  +I++
Sbjct: 162 IAALIKDAALAYVIGLVDMMGAGDNLISR 190



 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 29/43 (67%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +T++GTL+  G+LS + +   I   YV V R+ PP+V++F ++
Sbjct: 34  STLLGTLIARGQLSQSAIGRTISHSYVFVLRSTPPIVLLFLVF 76


>gi|255524919|ref|ZP_05391867.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|255511397|gb|EET87689.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
          Length = 232

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 46/70 (65%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S  + AFIAEIVR  L  +  GQ EA ++LGLT  +    V++P A +S++P L +Q
Sbjct: 109 IVISLNSGAFIAEIVRGSLEGIDLGQKEAGVSLGLTPFQTLWHVVIPPAFKSMLPALFNQ 168

Query: 331 YLNLLKNSSL 340
           ++  +K++++
Sbjct: 169 FIITVKDTAI 178


>gi|256828614|ref|YP_003157342.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256577790|gb|ACU88926.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 222

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 65/118 (55%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +E +R GL+++ RGQ+ AA ALG +       +++PQA R  +P   ++ + L+K
Sbjct: 100 SAAYHSEYIRGGLLSIKRGQVLAAQALGFSTFTTLIWIIIPQAFRRALPGCGNEIVYLIK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            SSLA  +   +L      + +++ +  E+ ++    YL L  + +  + RL  ++ +
Sbjct: 160 YSSLAYVITCFELTGQAKIVASESFRFSEVFMVVGVYYLILVSVASYGLRRLEKRLEI 217


>gi|146312499|ref|YP_001177573.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145319375|gb|ABP61522.1| L-arginine ABC transporter membrane protein / L-lysine ABC
           transporter membrane protein / L-histidine ABC
           transporter membrane protein / L-ornithine ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 228

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFI 281
           T LI G+P LVL+ L +   Q+  +       + IG S +  + M +  I L     A+ 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNSVT----DAIGMSQIDIDPMVAGIITLGFIYGAYF 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   +AVPRG +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L 
Sbjct: 109 TETFRGAYMAVPRGHIEAATAFGFTASQIFRRIMFPAMMRFALPGIGNNWQVILKATALV 168

Query: 342 VAVGFADLVS 351
             +G  D+V 
Sbjct: 169 SLLGLEDVVK 178



 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            ++  IL G + T  LA S ++ A +IG LVGAG +LS+N+++A +   Y  + R +P L
Sbjct: 4   GFSGVILQGALVTLELALSSVVLAVLIG-LVGAGAKLSSNRILALVFEAYTTLIRGVPDL 62

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V++  ++      L I  +S+    GM
Sbjct: 63  VLMLLIFYG----LQIALNSVTDAIGM 85


>gi|85057405|ref|YP_456321.1| ABC transporter extracellular solute-binding protein [Aster yellows
           witches'-broom phytoplasma AYWB]
 gi|84789510|gb|ABC65242.1| ABC transporter, bacterial extracellular solute-binding protein
           [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 569

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 52/87 (59%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L +F F   +T      + Y+ +   T  +I+EI+   +  + +GQ+EA+++LG+TH + 
Sbjct: 426 LKEFIFFKNATWYTPMFAAYMVIILNTMGYISEIITKNIYFLDKGQIEASLSLGMTHTQT 485

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            R ++LPQA++    P+ ++++  LK+
Sbjct: 486 MRYIVLPQAIKRSQTPILNEFIINLKD 512


>gi|320326493|gb|EFW82545.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331784|gb|EFW87722.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 206

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 23/163 (14%)

Query: 214 KTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVLGQFNFIGGS 260
           KT    PL ++ ST+  L+ G+P L+ + L Y             FD P L    F  G 
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAG- 99

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  
Sbjct: 100 ---------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMW 150

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           R  +P L + ++ L+K+++L   +G  +++      +  T QA
Sbjct: 151 RIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQA 193


>gi|209546302|ref|YP_002278192.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539159|gb|ACI59092.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 241

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 17/141 (12%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKP--------VLGQFNFIGGSTVSPEFMSL 269
           AL  +Y + F   G+P L++I   Y ++F            +G   F+G     P F + 
Sbjct: 56  ALGNVYTTVFR--GVPELLII---YLIYFGGSSAVTSIGKAMGYEGFLG----LPSFAAG 106

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +A+   + ++ AE+ R   +A+ +G++EAA A+G+      R +++PQ +R  IP L +
Sbjct: 107 ALAVGIISGSYQAEVFRGAFLAISKGELEAASAIGMHRAMRFRRIIMPQVLRLAIPGLGN 166

Query: 330 QYLNLLKNSSLAVAVGFADLV 350
            +   LK+S+L    G A+L+
Sbjct: 167 VWQLSLKDSALISVTGLAELM 187



 Score = 38.1 bits (87), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 13/73 (17%)

Query: 90  LVGFVNTFWLAF-------------SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           L+GF +T W A              + +    ++G +V   +LS N  +  +  VY  VF
Sbjct: 6   LLGFGSTGWGALLILATLMTLAVTATALAIGAVLGAIVAGAKLSGNPFLVALGNVYTTVF 65

Query: 137 RNIPPLVVIFFLY 149
           R +P L++I+ +Y
Sbjct: 66  RGVPELLIIYLIY 78


>gi|300310495|ref|YP_003774587.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300073280|gb|ADJ62679.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 218

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 11/135 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP +V +   + ++F  P +G    I  S      + L IA S Y A    E  R+
Sbjct: 59  IIRGLPIIVQL---FYIYFVLPDIG----IQLSAFQAGVVGLGIAYSAYQA----ENFRA 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV  GQ+EAA ++G+      R V+LPQA R  +PP  +  + +LK+SSL   +   
Sbjct: 108 GIEAVDMGQIEAAQSIGMRGPLIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLVSTITVL 167

Query: 348 DLVSVGGTIINQTGQ 362
           ++   G  I + T Q
Sbjct: 168 EMTRAGQMIASSTFQ 182


>gi|330977203|gb|EGH77160.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 155

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 40/62 (64%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNS 153

Query: 331 YL 332
           ++
Sbjct: 154 FI 155


>gi|306831519|ref|ZP_07464677.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304426304|gb|EFM29418.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 227

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 36/208 (17%)

Query: 193 SFVLGIVLSLFA-------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +FVLG+++SL         +++ + + E + +  PLL    FL FGLP + ++     L 
Sbjct: 32  AFVLGLLISLIKYYKIPVLSQICQVYIELS-RNTPLLIQLYFLYFGLPKIGIV-----LS 85

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            +   +    F+GGS                   ++AE  RSGL A+ + Q E  +++GL
Sbjct: 86  SEMCAVVGLIFLGGS-------------------YMAESFRSGLEAISKTQYEVGLSIGL 126

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQ 362
              +    V+ PQA+   +P L +  + L+K +S+   V  ADL+ V   +I    +T +
Sbjct: 127 KPVQNFFYVIFPQALAVSLPSLVANVIFLIKETSVFSIVALADLMYVAKDLIGLYYETDE 186

Query: 363 A-IEIILIWMFIYLSLSIMIALFMNRLN 389
           A + ++L ++ + L +S++  L   RL 
Sbjct: 187 ALLMLVLAYLIVLLPISLVARLIERRLR 214



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 36/56 (64%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           V T  LAF G++ A ++G L+   +     +++ IC+VY+E+ RN P L+ ++FLY
Sbjct: 19  VLTIRLAFFGILGAFVLGLLISLIKYYKIPVLSQICQVYIELSRNTPLLIQLYFLY 74


>gi|87122496|ref|ZP_01078376.1| putative amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
 gi|86162289|gb|EAQ63574.1| putative amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
          Length = 220

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 37/169 (21%)

Query: 209 RHFHEKTGKALPLLYIST-----------FLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           R +  K  +++  +Y+             F+ FGLP+L                      
Sbjct: 43  RQYGNKASQSVVAVYVEIIRNTPFIVQLFFIFFGLPSL---------------------- 80

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA-TRLVLL 316
            G  +SP   S+ IAL+    A+  EI+R+GL ++ +GQMEAA  LGL+  +  TR++  
Sbjct: 81  -GMKLSPWEASM-IALTINLGAYSTEIIRAGLGSISKGQMEAAKVLGLSFCQTLTRVIFT 138

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           P A   I P LTSQ + ++  S++   +   DL      + ++  +A E
Sbjct: 139 P-AFEKIYPALTSQCIIVMLGSAVISQISVEDLTYAANLVQSRNFRAFE 186


>gi|269219725|ref|ZP_06163579.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269210967|gb|EEZ77307.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 225

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I  S + +A + ++VRS + ++P  Q  +  ALG+T  +    V+LPQ +R ++P
Sbjct: 92  FTTAVIVFSVWGSAEMGDLVRSAVQSIPAHQYASGFALGMTKAQVNLNVILPQTVRRLLP 151

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIM 380
              +    ++  +SL V +G  +++ VG  II+    A     +W++     +Y ++  +
Sbjct: 152 LTINLANRMIMTTSLVVLIGVTEVLKVGQQIIDANRFAYPKAALWVYGAIFLLYFAVCYV 211

Query: 381 IALFMNRLNAK 391
           I+ F   L  K
Sbjct: 212 ISQFSKYLERK 222


>gi|57242452|ref|ZP_00370390.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           upsaliensis RM3195]
 gi|57016737|gb|EAL53520.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           upsaliensis RM3195]
          Length = 233

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 61/110 (55%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            ++ P F    + LS    A++AE +R+G  +V + Q EA ++LG +     R V+LPQA
Sbjct: 98  ESLRPAFACAIVGLSFLGGAYMAEALRAGFESVKKQQFEAGLSLGFSAFGNLRYVILPQA 157

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   +  +++  + L+K +S+   +   DLV++  ++ + T +  E++ +
Sbjct: 158 LAVAMSGISANIIFLIKETSVVSIIALPDLVTLMKSLNSLTYKTDELLFM 207



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 92  GFVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            FV   WL    +F G++ + IIG           K +  +C++Y+E  RN P L+ +FF
Sbjct: 12  AFVEAAWLTLKLSFWGVVFSLIIGFFCVLMHFFKLKFMGNLCQIYIEFSRNTPLLIQLFF 71

Query: 148 LYKSV 152
           LY ++
Sbjct: 72  LYYAL 76


>gi|330899536|gb|EGH30955.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 283

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 37/49 (75%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA
Sbjct: 235 IGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQA 283


>gi|156742156|ref|YP_001432285.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
 gi|156233484|gb|ABU58267.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
          Length = 217

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 1/87 (1%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SP F +  +AL   + A+  EI R  L AV  GQM AA A+G++  +A + V+LPQA+R 
Sbjct: 85  SP-FWAGALALGFASGAYQTEIFRGALQAVQPGQMIAARAIGMSRLQAIQSVVLPQALRL 143

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +P   ++   +LK+S+L  AVG  ++
Sbjct: 144 ALPAWGNEATLVLKDSTLVFAVGVPEI 170


>gi|302876279|ref|YP_003844912.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|307687011|ref|ZP_07629457.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|302579136|gb|ADL53148.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
          Length = 225

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 5/126 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A + ++VR  ++++P+ Q E+  A+GLT  +    +++PQ +R ++P   + 
Sbjct: 97  IVFSLWGTAEMGDLVRGAIMSLPKHQRESGKAIGLTENQIYLYIIIPQVVRRLVPAAMNL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF-----IYLSLSIMIALFM 385
              ++K +SL V +G  +++ V   II  +         W++     +Y  +   ++LF 
Sbjct: 157 ATRMIKTTSLVVLIGVVEVLKVSQQIIESSVLKNPSAAFWVYGFCFILYFIICYPMSLFS 216

Query: 386 NRLNAK 391
            RL  K
Sbjct: 217 KRLEKK 222


>gi|166032312|ref|ZP_02235141.1| hypothetical protein DORFOR_02015 [Dorea formicigenerans ATCC
           27755]
 gi|166028035|gb|EDR46792.1| hypothetical protein DORFOR_02015 [Dorea formicigenerans ATCC
           27755]
          Length = 224

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 59/100 (59%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +S E  S+ I  + + AA ++++VR  LI++P+ Q E++ ALGL+  +    +++PQ
Sbjct: 86  GWDLSGENASI-IVFTFWGAAEMSDLVRGALISIPKHQYESSEALGLSKVQTYWYIIIPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +R +IP   +    ++K +SL + +G  +++ V   II 
Sbjct: 145 TLRRLIPLSINLITRMIKTTSLILMIGVVEVLKVSQQIIE 184


>gi|123441655|ref|YP_001005639.1| histidine transport system permease protein HisM [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088616|emb|CAL11411.1| histidine transport system permease protein HisM [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 238

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 167 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLF 221


>gi|55821629|ref|YP_140071.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737614|gb|AAV61256.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
          Length = 323

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 231 GLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y     F + + G+F         P  +    A +   AA+++E +R+ 
Sbjct: 143 GTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRAA 202

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + G  +
Sbjct: 203 IQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIVE 262

Query: 349 LVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +    +GG       + I + L    +Y ++SI+I      +   +A+K  +
Sbjct: 263 MYAQAQILGGADYRYFERYISVAL----VYWAISILIEYIGRSVENHMAIKAPE 312


>gi|118590988|ref|ZP_01548388.1| putative transport system permease abc transporter protein [Stappia
           aggregata IAM 12614]
 gi|118436510|gb|EAV43151.1| putative transport system permease abc transporter protein [Stappia
           aggregata IAM 12614]
          Length = 242

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 12/182 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAA 279
           LL + T +I  +P LVLI L Y    D  V       G   V    ++  I  +     A
Sbjct: 63  LLEVYTTVIRAVPELVLILLLYYAGTDA-VNSLLMLAGLPRVDISGLAAGIFVIGVVQGA 121

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E++R  + A+P GQ+EAA A G++  K  R + LP  +   IP L++ +L   K+++
Sbjct: 122 YSTEVLRGAIKAIPPGQIEAARAYGMSPFKTLRRITLPAMLPYAIPGLSNLWLIATKDTA 181

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM---IALFMNRLNAKIALKE 396
           L   VGF++L  V       T QA      +M  Y +  ++   + L  NR+   I  + 
Sbjct: 182 LLAVVGFSELTLV-------TRQAAGATKAYMLFYCAAGVLYLTLTLVSNRVIGHIERRA 234

Query: 397 KK 398
           ++
Sbjct: 235 RR 236


>gi|16264002|ref|NP_436794.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|150376016|ref|YP_001312612.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|307300145|ref|ZP_07579930.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307316502|ref|ZP_07595945.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15140126|emb|CAC48654.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|150030563|gb|ABR62679.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|306897700|gb|EFN28443.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306905034|gb|EFN35617.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 221

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 9/112 (8%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y  HF    LG F    G  +SP + +L + ++   A ++AE  R  L A+P  Q  A  
Sbjct: 75  YMAHFG---LGNF----GIHLSP-YTALLVGIAFNNAGYLAENFRGALKAIPDTQARAGR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSV 352
           +LG+T  +A RL++LPQ +R    P T+Q +  +  +SL V VG   DL  +
Sbjct: 127 SLGMTSLQAFRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGI 178


>gi|325263519|ref|ZP_08130253.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. D5]
 gi|324031228|gb|EGB92509.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. D5]
          Length = 224

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 62/122 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   T+A   EI+R+GL+AV +   E + ALG T  +     +LP + R     L + 
Sbjct: 99  IALGINTSAQNCEIIRAGLLAVKKDYYECSEALGYTKIQTLWYFVLPISFRLAFKSLVNN 158

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++NL+  SS+  ++   + +     I+ +T +  EI L+ +  Y   + +I+     ++ 
Sbjct: 159 FINLVLTSSVCFSITVVETMGAAKIIVGRTSRPFEIYLMILLCYCIFTYIISFIAKFIDR 218

Query: 391 KI 392
           KI
Sbjct: 219 KI 220


>gi|209559793|ref|YP_002286265.1| Putative amino acid ABC transproter [Streptococcus pyogenes NZ131]
 gi|209540994|gb|ACI61570.1| Putative amino acid ABC transproter [Streptococcus pyogenes NZ131]
          Length = 267

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 65/127 (51%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R  ++P A    IP L +  
Sbjct: 130 AFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRGIIPNATGGAIPTLINGL 189

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L K +SL    G  ++V+    +     +  E  +    +Y S+SI++      +  K
Sbjct: 190 IGLTKGTSLGFNAGIVEMVAQAQILGGSDYRYFERYISVALVYWSISILMEQVGRLIENK 249

Query: 392 IALKEKK 398
           +A+K  +
Sbjct: 250 MAIKAPE 256


>gi|238785202|ref|ZP_04629194.1| Histidine transport system permease protein hisM [Yersinia
           bercovieri ATCC 43970]
 gi|238713880|gb|EEQ05900.1| Histidine transport system permease protein hisM [Yersinia
           bercovieri ATCC 43970]
          Length = 216

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 85  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 145 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLF 199


>gi|238763902|ref|ZP_04624859.1| Histidine transport system permease protein hisM [Yersinia
           kristensenii ATCC 33638]
 gi|238697870|gb|EEP90630.1| Histidine transport system permease protein hisM [Yersinia
           kristensenii ATCC 33638]
          Length = 216

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 85  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 145 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLF 199


>gi|222086404|ref|YP_002544938.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723852|gb|ACM27008.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 223

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A PRGQ EA  +L +T  +  R V+L  +++ I 
Sbjct: 89  EITAANLAMIVNLGAYSCEIIRAGIQATPRGQFEAGASLAMTPFETFRHVILVPSLQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  S++   +   DL      I +++ +A E   +   IYL L+I++
Sbjct: 149 PALSSQVVIVMLGSAVVSQIAAEDLTFAANFIQSRSFRAFEAYFVSTAIYLLLAIIL 205


>gi|254512077|ref|ZP_05124144.1| ABC transporter, permease protein, HisMQ family [Rhodobacteraceae
           bacterium KLH11]
 gi|221535788|gb|EEE38776.1| ABC transporter, permease protein, HisMQ family [Rhodobacteraceae
           bacterium KLH11]
          Length = 295

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 17/149 (11%)

Query: 262 VSPEFM----SLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            SPE++      ++A+  ++    AF A ++  G+ AVPR Q+E A A G+T R+    +
Sbjct: 130 TSPEWVHETYGFFLAVVTFSIVFGAFAANVLFGGMRAVPRAQLETAEAYGMTRRQTFWRI 189

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV----SVGGTIINQ-TGQAIEIILI 369
           L+PQ     +P L++ ++ L+K + L   +G  D+V     +GGT  ++ T        +
Sbjct: 190 LVPQMWVYALPGLSNLWMVLIKATPLLFLLGIEDIVYWARELGGTKTSRFTDYPHGDWRM 249

Query: 370 WMFI-----YLSLSIMIALFMNRLNAKIA 393
           W F+     YL ++ +  L + RL  +++
Sbjct: 250 WYFLGLLIFYLGMTRVSELGLERLMRRLS 278


>gi|260772507|ref|ZP_05881423.1| amino acid ABC transporter permease protein [Vibrio metschnikovii
           CIP 69.14]
 gi|260611646|gb|EEX36849.1| amino acid ABC transporter permease protein [Vibrio metschnikovii
           CIP 69.14]
          Length = 225

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 6/161 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKDTWWEHAWFCALVAFILNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            + +G++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  V   DL 
Sbjct: 116 GLSKGEIEAAKAYGMSPWLTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                + ++     E  L+    YL L+ +I     R   +
Sbjct: 176 GTARLVSSRYYAPFEAFLVAGLFYLLLTFLILWCFKRAEKR 216


>gi|311279323|ref|YP_003941554.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308748518|gb|ADO48270.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 239

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEI 284
           G+P L++I   Y  +F     G  ++IG      G    P F+   +A+   +A++  E+
Sbjct: 65  GIPELLVI---YLFYFGGS--GLISWIGHLFGADGFIEVPPFLIGALAIGLISASYQGEV 119

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+  +A+  G++EAA+A+G+   +    ++LPQ +R  +P L++ +   LK+S+L    
Sbjct: 120 YRAARLALASGEVEAAVAIGMPRWRICSRIMLPQIVRYALPGLSNVWQMSLKDSALVSVT 179

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           G A+L+         T +     LI    YL L+++
Sbjct: 180 GIAELMRASQIAAGSTREYFLFYLIGGSCYLILTLL 215


>gi|90409071|ref|ZP_01217196.1| histidine transport system permease protein HisM [Psychromonas sp.
           CNPT3]
 gi|90309828|gb|EAS37988.1| histidine transport system permease protein HisM [Psychromonas sp.
           CNPT3]
          Length = 224

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 4/146 (2%)

Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           GQF  +  S +   F   +    +AL+  T A+ AEIVR  ++ +P+G++EAA A G++ 
Sbjct: 77  GQFEALRDSWLWEYFQEAWFCALLALTLNTGAYTAEIVRGVIVTMPKGELEAAKAYGMSA 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               + + LP A+R  +P  +++ + ++  S++   V   D+      + ++     E  
Sbjct: 137 WLILKRITLPNALRRALPVYSNEIIFMIHGSAITGLVTIVDITGAARVVNSRYYAPFEAY 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           L    +Y+ L+  +     R     A
Sbjct: 197 LAAAVLYMCLTFSVIYIFKRWEMHYA 222


>gi|116617290|ref|YP_817661.1| ABC-type amino acid transport permease component [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096137|gb|ABJ61288.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 236

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 10/149 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A P++ +       LP+L+ + +  +LH++  V            +P   ++ I  +  
Sbjct: 61  RATPMVLLILLFYSTLPSLLNVLVNQKLHWNVKVFDT---------NPIIYAI-IVFALI 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A ++E+ RS ++ +  GQ EAA+ +GLT  +A   +++PQA+ S +P + +  LN+LK
Sbjct: 111 AVANLSEVFRSAILTIDPGQKEAALMVGLTPIQAYYRIIIPQALVSAVPNIGNLTLNILK 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +SLA  +   ++ +V  T  + T    E
Sbjct: 171 GTSLAFMMTVQEVTAVAKTAASYTYDYTE 199


>gi|332162409|ref|YP_004298986.1| histidine transport system permease protein HisM [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606494|emb|CBY27992.1| histidine ABC transporter, permease protein HisM [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666639|gb|ADZ43283.1| histidine transport system permease protein HisM [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863721|emb|CBX73822.1| histidine transport system permease protein hisM [Yersinia
           enterocolitica W22703]
          Length = 238

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 167 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLF 221


>gi|254302675|ref|ZP_04970033.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148322867|gb|EDK88117.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 240

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 24/139 (17%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    FL FGLP +                       G   SPE   + I L+    +
Sbjct: 85  PLLVQLFFLYFGLPKV-----------------------GLRFSPEACGI-IGLTFLGGS 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT+  + LLK +S
Sbjct: 121 YMIETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIFLLKETS 180

Query: 340 LAVAVGFADLVSVGGTIIN 358
           +  A+   D++ V   +I 
Sbjct: 181 VFSAISLMDMMFVTRDLIG 199


>gi|257488011|ref|ZP_05642052.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|331008685|gb|EGH88741.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 244

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 60/112 (53%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G +     F  + I +S +  AF AE +R+G+ AVP   +EAA +L    R+    V L
Sbjct: 102 VGAANPLTPFAWVMIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFNSRQLLWNVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q+   +E+++
Sbjct: 162 PLAVRFALPSLVNNLIDLVKMTAVASAIAVNDITYASIMIWTQSDNVLELMI 213


>gi|153951032|ref|YP_001398495.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152938478|gb|ABS43219.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. doylei 269.97]
          Length = 218

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   +++PQAMR + P   + 
Sbjct: 92  IVFSIWGCFEMMDLVRVSLQSIPKHQYESASSLGLNTVQSFIYIIIPQAMRRLTPMSMNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL-IWMFIYLSLSIMIALFMN 386
              ++K+++ A  +G  +LV VG  II   N+   A  II  +  FI+  L   I L+  
Sbjct: 152 LTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSR 211

Query: 387 RLNAK 391
           +L  K
Sbjct: 212 KLEKK 216


>gi|307320131|ref|ZP_07599551.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306894177|gb|EFN24943.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 241

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 14/186 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFD--KPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           LL   T ++  +P LVLI L Y    D     LG    +G   +S     +++ +     
Sbjct: 62  LLECYTTVVRAVPELVLILLLYYAGTDLLNQFLGAIG-VGAVDISGLVAGIFV-IGVVQG 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  + AVP GQ+EAA A G++     R + LP  +   IP L + +L   K++
Sbjct: 120 AYSTEVLRGAIKAVPAGQIEAARAYGMSPLLVLRRITLPAMLPYAIPGLANLWLIATKDT 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF----IYLSLSIMIALFMNRL--NAKI 392
           +L   VGF++L      +  Q   A +  L++      +YL+L+++  +F+  L  +A+ 
Sbjct: 180 ALLAVVGFSELT----LVTRQAAGATKAYLLFFCAAGALYLALTLVSNVFIGMLERHARR 235

Query: 393 ALKEKK 398
              E++
Sbjct: 236 GFAEQR 241


>gi|317011145|gb|ADU84892.1| amino acid ABC transporter permease [Helicobacter pylori
           SouthAfrica7]
          Length = 237

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 13/200 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F+   +L IV++L      + F  +   A    Y+S  +I G P LV I + +   +  P
Sbjct: 47  FILGLLLAIVVALIKIAPPKRFIHRALLAGVNFYVS--IIRGTPLLVQIVVVF---YGLP 101

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL + +
Sbjct: 102 ALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLNYLQ 153

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I L 
Sbjct: 154 TFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEIFRIAQQKANASYDFLPIYLE 213

Query: 370 WMFIYLSLSIMIALFMNRLN 389
              IY    +++ +   R+ 
Sbjct: 214 AALIYWLFCLVLEVIQKRVE 233


>gi|261340701|ref|ZP_05968559.1| histidine transport system permease protein HisQ [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317117|gb|EFC56055.1| histidine transport system permease protein HisQ [Enterobacter
           cancerogenus ATCC 35316]
          Length = 228

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFI 281
           T LI G+P LVL+ L +   Q+  +    G  + IG   +  + M +  I L     A+ 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALN----GVTDAIGMDQIDIDPMVAGIITLGFIYGAYF 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L 
Sbjct: 109 TETFRGAYMAVPKGHIEAATAFGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALV 168

Query: 342 VAVGFADLVS 351
             +G  D+V 
Sbjct: 169 SLLGLEDVVK 178



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            ++  IL G + T  LA S ++ A +IG L GAG +LSANK +A I   Y  + R +P L
Sbjct: 4   GFSGVILQGALVTLELALSSVVLAVLIG-LAGAGAKLSANKPLALIFEGYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|330985960|gb|EGH84063.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 244

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 60/112 (53%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G +     F  + I +S +  AF AE +R+G+ AVP   +EAA +L    R+    V L
Sbjct: 102 VGAANPLTPFAWVVIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFNSRQLLWNVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q+   +E+++
Sbjct: 162 PLAVRFALPSLVNNLIDLVKMTAVASAIAVNDITYASIMIWTQSDNVLELMI 213


>gi|312867877|ref|ZP_07728082.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096632|gb|EFQ54871.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 266

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 68/123 (55%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+ +E +R+ +++V  G++EAA +LG+T+R+  R +++P A     P L + 
Sbjct: 128 VALAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNRQVYRRIIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K +SLA +      FA    +GG+ +    + I + +++  + + + I+      
Sbjct: 188 LIGLTKGTSLAFSASVVEIFAQARIIGGSDLKYFERFITVSIVYWIVNILIEILGRHIER 247

Query: 387 RLN 389
           RL+
Sbjct: 248 RLD 250


>gi|116628342|ref|YP_820961.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101619|gb|ABJ66765.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|312278968|gb|ADQ63625.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 307

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 231 GLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y     F + + G+F         P  +    A +   AA+++E +R+ 
Sbjct: 127 GTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRAA 186

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + G  +
Sbjct: 187 IQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIVE 246

Query: 349 LVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +    +GG       + I + L    +Y ++SI+I      +   +A+K  +
Sbjct: 247 MYAQAQILGGADYRYFERYISVAL----VYWAISILIEYIGRSVENHMAIKAPE 296


>gi|315452694|ref|YP_004072964.1| amino-acid(glutamine) ABC transporter integral membrane protein
           [Helicobacter felis ATCC 49179]
 gi|315131746|emb|CBY82374.1| amino-acid(Glutamine) ABC transporter integral membrane protein
           [Helicobacter felis ATCC 49179]
          Length = 212

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 7/94 (7%)

Query: 272 ALSCYT-------AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           ALSC          A++AE    GL A+ + Q E++++LGL+  ++ R VLLPQ++   +
Sbjct: 80  ALSCAVLGVIFLGGAYMAESFLLGLKALSKVQFESSLSLGLSKWQSLRFVLLPQSLAISL 139

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           P L +  + LLK +S+  A+  ADL+ V   +I 
Sbjct: 140 PSLGANTIFLLKETSVVSAIALADLMFVAKDLIG 173


>gi|326317638|ref|YP_004235310.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323374474|gb|ADX46743.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 250

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + ++P F+ + + +S +  AF AE +R+G+ AVP   +EAA +LG + R+    V LP
Sbjct: 110 GQNPLTP-FVWVVVVISLHKGAFHAEALRAGIEAVPATTLEAARSLGFSQRQLLARVQLP 168

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A R  +P L +  ++L+K +++A A+   D+
Sbjct: 169 LAARFALPSLVNNLVDLVKMTAVASAIAVGDV 200


>gi|241764990|ref|ZP_04762987.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241365424|gb|EER60211.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 220

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S+ + L+   +AF A+ +RSG+  +   Q+EAA++LG+        V+LPQA+RS++ P+
Sbjct: 90  SVILTLTLVCSAFTADYLRSGINTIGGSQIEAALSLGMRPMHIISAVVLPQALRSVVQPM 149

Query: 328 TSQYLNLLKNSSLA--VAVGFADLVSVGGTIINQT 360
           TS  + L+ ++SLA  V V   +L ++   I N +
Sbjct: 150 TSLLIALMLSTSLASQVPVPGRELTALVSKIANDS 184


>gi|83717299|ref|YP_439606.1| histidine ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|167578034|ref|ZP_02370908.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis TXDOH]
 gi|167616165|ref|ZP_02384800.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis Bt4]
 gi|257142743|ref|ZP_05591005.1| histidine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83651124|gb|ABC35188.1| histidine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 229

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R   +AVPRGQ+EA  A G+   +    ++ PQ MR  +P
Sbjct: 94  FVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMGSWRVFARIMFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV 350
            + + +  L+K ++L   +G AD+V
Sbjct: 154 GIGNNWQVLVKATALVSIIGLADVV 178


>gi|330948062|gb|EGH48322.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. pisi str. 1704B]
          Length = 110

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 53/80 (66%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA++    A++ EI+R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + 
Sbjct: 3   IAMTFLGGAYLTEILRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFAN 62

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ LLK +++  AV   +++
Sbjct: 63  FVFLLKETTVVSAVAVPEIL 82


>gi|237653225|ref|YP_002889539.1| polar amino acid ABC transporter inner membrane subunit [Thauera
           sp. MZ1T]
 gi|237624472|gb|ACR01162.1| polar amino acid ABC transporter, inner membrane subunit [Thauera
           sp. MZ1T]
          Length = 230

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  E  R   +AV  GQ+EA  A G++  +  R +L PQ +R  +P + + +L LLK+
Sbjct: 107 GAYFTETFRGAFLAVSAGQLEAGRAYGMSALQVFRRILFPQMLRFALPGIGNNWLVLLKS 166

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +++   +G +D+  +       T Q     L    +YL+++
Sbjct: 167 TAIVSMIGLSDMTRIADQAGRSTHQPFTFYLAVCVLYLAMT 207


>gi|298717478|ref|YP_003730120.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361667|gb|ADI78448.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 229

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 51/89 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS Y   +++E++R   +AV RGQ +A  +LG + R+    V+ PQA+   +P   + 
Sbjct: 89  IGLSLYHGGYLSEVMRPAYLAVERGQHDATDSLGYSFRQKMLRVIGPQAVHFALPGYGNA 148

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            + L+ N +L + +G AD+++    I+ +
Sbjct: 149 IIYLIHNVALVMYIGAADVMATAHLIMER 177


>gi|257868426|ref|ZP_05648079.1| L-cystine transport system permease tcyM [Enterococcus gallinarum
           EG2]
 gi|257802590|gb|EEV31412.1| L-cystine transport system permease tcyM [Enterococcus gallinarum
           EG2]
          Length = 236

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS  +A   +EI R    AV +GQ +AA ++G+T+ +  R VLLPQA    +P  ++  
Sbjct: 107 ALSLMSAINSSEIFRGAFAAVKKGQFDAAKSIGMTNLQVIRRVLLPQAWPISLPMFSNLL 166

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA----LFMNR 387
           ++L+K S+LA  V   D+ +       Q  + +E  +    IY  +S++I     L  NR
Sbjct: 167 ISLVKASALASMVSVVDVFAAAKITAQQNYRFLEAYVAVAIIYWLISLVIEKGTQLLENR 226

Query: 388 LNAKI 392
           L  K+
Sbjct: 227 LLRKL 231


>gi|330872635|gb|EGH06784.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 179

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 24/172 (13%)

Query: 205 TRLSRHFHEKTGKALPLLYI-STF--LIFGLPTLVLIALKY----------QLHFDKPVL 251
           TR +R   +      PL ++ ST+  L+ G+P L+ + L Y             FD P L
Sbjct: 6   TRTARRLGQDLAYK-PLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDL 64

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F  G           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +  
Sbjct: 65  ALSAFSAG----------VIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRIL 114

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
             ++LPQ  R  +P L + ++ L+K+++L   +G  +++      +  T QA
Sbjct: 115 FKLVLPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQA 166


>gi|150395400|ref|YP_001325867.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150026915|gb|ABR59032.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 274

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 4/126 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   AA+  E++R     VP G++EAA A G+      R + LP+A+   +P L  + 
Sbjct: 149 ALTVSFAAYEGEVMRGAFAGVPAGELEAARAYGMGRWTMFRRIWLPRAIHRALPTLNGET 208

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS----IMIALFMNR 387
           +  LK++ L   +   D+ +V   +  +T    E +L+   IY+ L+    +    F NR
Sbjct: 209 VLQLKSTPLVATITVVDVYAVISKVRQETYLTYEPLLLLAAIYMCLTGTLVVAFRYFENR 268

Query: 388 LNAKIA 393
           +  + A
Sbjct: 269 IPTRGA 274


>gi|300313166|ref|YP_003777258.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075951|gb|ADJ65350.1| ABC-type amino acid transport system, permease protein
           [Herbaspirillum seropedicae SmR1]
          Length = 227

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+    A+  EI+R+G+ ++  GQ+EAA  LG++       V+L  A+  + P LTSQ
Sbjct: 95  IALTVNVGAYTTEIMRAGINSIHPGQIEAAECLGMSRFHVYWHVVLLPAVERVYPSLTSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           ++ L+  SS+   +   +L +    + ++T ++ E+  +    YL LS +
Sbjct: 155 FILLMLASSITSQISAEELTATANLVQSETFRSFEVYAVIAVAYLVLSFL 204


>gi|116252501|ref|YP_768339.1| transmembrane permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115257149|emb|CAK08244.1| putative transmembrane permease component of ABC transporter
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 276

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  TAA+ AEI+R  + +VP GQ EAA ALG+ +  A R ++LPQA    + P  ++ 
Sbjct: 151 AMTINTAAYQAEILRGAIESVPHGQREAAAALGIHNSIAFRKIILPQAFIVALRPYGNEI 210

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + L+K S++   +   DL+ 
Sbjct: 211 ILLIKGSAVVAIITVLDLMG 230


>gi|312866307|ref|ZP_07726525.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098001|gb|EFQ56227.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 302

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 80/150 (53%), Gaps = 18/150 (12%)

Query: 219 LPLLY-ISTFLIF---GLPTLVLIALKYQLHFDKPVLGQF---NFIGG---STVSPEFMS 268
           +P+LY I  F +    G P LV + L Y   +  P+L ++    F  G   + +SP   +
Sbjct: 107 VPVLYQIQAFFVSFLRGTPILVQLMLTY---YGIPLLLRYLNMKFNTGWNINNISPIVFA 163

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + +A +   AA+ +E +R+ + AV  G++EAA +LG+T+ +  R V++P A     P L 
Sbjct: 164 V-VAFALNEAAYTSETIRAAIQAVDAGEIEAAKSLGMTNAQIYRRVIIPNAAVIATPTLI 222

Query: 329 SQYLNLLKNSSLAVAVG----FADLVSVGG 354
           +  ++L K +SLA + G    FA    +GG
Sbjct: 223 NTLISLTKGTSLAFSAGIIEMFAQAKIIGG 252


>gi|238795092|ref|ZP_04638684.1| Histidine transport system permease protein hisM [Yersinia
           intermedia ATCC 29909]
 gi|238725587|gb|EEQ17149.1| Histidine transport system permease protein hisM [Yersinia
           intermedia ATCC 29909]
          Length = 216

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 85  LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKLYRCIILPSALRIALPAYSNE 144

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      D++ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 145 VILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLF 199


>gi|169830101|ref|YP_001700259.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168994589|gb|ACA42129.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 233

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +I  +  + A + E+ RS L  + +GQ+EAA ++GLT  +A   +++PQA+   +P + +
Sbjct: 103 FIVFAFSSTAILIEVFRSALSTIEKGQLEAAYSIGLTTFQAYTRIIIPQALVVALPNICT 162

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +NL+K +SL  A+   ++        N     +E  L    +YL L   +     R
Sbjct: 163 ATVNLIKATSLGYAMSLPEITLKAKVAANVGYNYVEAYLDIFIVYLILCSTVEYLFKR 220


>gi|89900315|ref|YP_522786.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89345052|gb|ABD69255.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 237

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 17/141 (12%)

Query: 215 TGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG--STVSP----- 264
           TG   PL ++    T+++ G P L+ + L Y        LGQ  +I     TV P     
Sbjct: 45  TGPWAPLRWVVGAYTYVMRGTPLLIQVYLIYY------GLGQLEWIQARWDTVWPWTHFK 98

Query: 265 -EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F    +A S  TA + AE++   +     G++EAA A G++  K    ++LP AMR  
Sbjct: 99  EPFFCALLAFSLNTAGYTAEMLAGAIRETAAGEIEAAQAYGMSRFKVMLHIVLPSAMRRT 158

Query: 324 IPPLTSQYLNLLKNSSLAVAV 344
           +P  +++ + +L+ +SLA AV
Sbjct: 159 LPAYSNEVVMMLQATSLASAV 179


>gi|126731795|ref|ZP_01747599.1| amino acid ABC transporter, permease protein [Sagittula stellata
           E-37]
 gi|126707622|gb|EBA06684.1| amino acid ABC transporter, permease protein [Sagittula stellata
           E-37]
          Length = 231

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 15/198 (7%)

Query: 195 VLGIVLSLFATRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           +L  +  LFA R +R     +    + +P L +   + +G+PTLV            P+ 
Sbjct: 34  LLAAIGKLFAPRPARILIDTYTTFVRGVPELVLLLIIYYGVPTLVQ---NVSRDLGVPIT 90

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              N          F++    L+   AAF  E+ R+   AVP GQ EAA ALGL+     
Sbjct: 91  LSIN---------PFVAGIGTLTLIYAAFACEVYRAAYAAVPVGQREAAYALGLSRAVTF 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V LPQ MR  +P L + ++ ++K ++L   +   +L+         T Q         
Sbjct: 142 RKVELPQMMRYALPGLGNVWMVVVKATALISIIQLPELMRNADIAARSTRQPFTFFFAAC 201

Query: 372 FIYLSLSIMIALFMNRLN 389
            +YL+++ +      RL 
Sbjct: 202 LLYLAITAISMWGQGRLE 219


>gi|238063941|ref|ZP_04608650.1| polar amino acid ABC transporter permease component [Micromonospora
           sp. ATCC 39149]
 gi|237885752|gb|EEP74580.1| polar amino acid ABC transporter permease component [Micromonospora
           sp. ATCC 39149]
          Length = 281

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%)

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE+ R+G+ +V   Q+ AA +LGL++R+  R V+LPQA+R + PPL +  + L K+  
Sbjct: 163 YLAEVFRAGIESVHPSQLAAARSLGLSYRQTMRHVVLPQAVRRVAPPLLNDVVALQKDVG 222

Query: 340 LAVAVGFADLVSVGGTIINQT 360
           L    G  D V        +T
Sbjct: 223 LVSLAGPIDAVRAAQIATAET 243


>gi|303233147|ref|ZP_07319820.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302480732|gb|EFL43819.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 219

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 26/182 (14%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P + +   +++ LP L     +  L +D  V+     IG                  
Sbjct: 62  RNIPAISLLVIVVYALPNL-----RITLPYDVCVILTVTLIG------------------ 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +AF +E + +G+  + +GQ+EAA  LG T  +  R V++PQA+RS + P+T+  + ++ 
Sbjct: 99  -SAFASENIMTGINTITKGQIEAARTLGFTFMQMLRFVVMPQALRSCVLPMTNLLIAMML 157

Query: 337 NSSLAVAVGFA--DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++   V  +  +L  +   I  +T   IE   I    Y++ +++I+   N+L+  + +
Sbjct: 158 TCAIGSQVPLSPQELTGLVSYINTRTVGGIEAFAISALGYVASALVISFLGNKLDKAVRI 217

Query: 395 KE 396
           K 
Sbjct: 218 KR 219


>gi|330431656|gb|AEC16715.1| arginine transporter permease subunit ArtM [Gallibacterium anatis
           UMN179]
          Length = 226

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 13/180 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG----STVSPEFMSLYIALSCYT 277
           +YI+ F   G P LV I L Y      P  GQF +I      S +S  +    +AL+  +
Sbjct: 51  VYITLFT--GTPLLVQIFLIY----SGP--GQFQWIVDGPLWSLLSNAWFCAMLALALNS 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  ++    + A+ +GQ E+  ALGL+ R  T  +L+P A++  +P  T++ + + K 
Sbjct: 103 AAYSTQLFYGAVKAISKGQWESCAALGLS-RAQTLKILIPYALKRALPSYTNEIILVFKG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SLA  +   D++     +      A+ I  +   IYL ++ +   F+ +L  ++ + E+
Sbjct: 162 TSLASTITIMDIMGYARQLYGTEYNALLIYGLAGVIYLVITGVATYFLRKLEQRVLVFER 221


>gi|55823557|ref|YP_141998.1| ABC transporter amino acid permease [Streptococcus thermophilus
           CNRZ1066]
 gi|55739542|gb|AAV63183.1| ABC transporter amino acid permease protein [Streptococcus
           thermophilus CNRZ1066]
          Length = 285

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 10/174 (5%)

Query: 231 GLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y     F + + G+F         P  +    A +   AA+++E +R+ 
Sbjct: 105 GTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRAA 164

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + G  +
Sbjct: 165 IQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIVE 224

Query: 349 LVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +    +GG       + I + L    +Y ++SI+I      +   +A+K  +
Sbjct: 225 MYAQAQILGGADYRYFERYISVAL----VYWAISILIEYIGRSVENHMAIKAPE 274


>gi|66046175|ref|YP_236016.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256882|gb|AAY37978.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 221

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 24/131 (18%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    F+ F LPTL                       G  VS  F S  IA++    A
Sbjct: 66  PLLIQLFFIYFALPTL-----------------------GIRVS-GFASAVIAMTFLGGA 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EI+R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK ++
Sbjct: 102 YLTEILRAGIEAVPKTQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETT 161

Query: 340 LAVAVGFADLV 350
           +  AV   +++
Sbjct: 162 VVSAVAVPEIL 172


>gi|227432936|ref|ZP_03914878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351282|gb|EEJ41566.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 240

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 2/113 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   A+ +AE+ +S  ++V  GQ EAA+ +GL+  +    + LPQ +   +P   + 
Sbjct: 102 IALSLLFASNLAEVFKSAYLSVNTGQREAALMVGLSEWQTFYRITLPQTIVVALPNFANT 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMI 381
              L+K+++LA  +G  D++  G  +I++     ++E  L    IY  L ++I
Sbjct: 162 VAALIKDAALAYVIGLLDMMGAGDNLISRNFGHHSLETYLALAIIYWILFVII 214


>gi|134288195|ref|YP_001110358.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134132845|gb|ABO59555.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 229

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R    A PRGQ+EAA A G+   +  + V  PQ MR  +P
Sbjct: 94  FVAGVVTLGFIYGAYFTETFRGAFQAAPRGQIEAATAYGMRPWQVFKRVQFPQMMRFALP 153

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G +D+V V
Sbjct: 154 GIGNNWQVLIKATALVSIIGLSDIVKV 180


>gi|317053914|ref|YP_004117939.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951909|gb|ADU71383.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 239

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 106/227 (46%), Gaps = 15/227 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+  T+T+  +   ++   +LG +L       SR   +  G      YI+ F   G+P L
Sbjct: 20  LNAATVTVTVSLCAWLLGAILGSLLCWMQIGGSRWQQKLAGG-----YITLFR--GVPEL 72

Query: 236 VLIALKYQLHFDK----PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           ++I   Y  +F       + G+   I G      F++  IA+   + A+ + + R     
Sbjct: 73  LVI---YLFYFGGRQVVALFGEMLDIAGPYDVNGFVAGAIAIGLISGAYQSGVFRGAYHV 129

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+G +EAA   G+      R +++PQA+++ +P + +Q+ +++K S+L    G  + ++
Sbjct: 130 IPKGTLEAATVTGMGRLMMFRRMIVPQALKTALPGMGNQWQSVIKESALVSVTGLVETMN 189

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              T  N T        +   IYL ++   + F+ R   K+A++ ++
Sbjct: 190 QISTASNSTQMPFFFYSVGAVIYLIITT-CSDFIFRYVEKVAMRGQQ 235


>gi|172064621|ref|YP_001812271.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171998106|gb|ACB69022.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 258

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R  ++ VPRGQMEAA A G +   A R +L PQ  +  +P + + +L LLK +
Sbjct: 134 AYYTETFRGAMLGVPRGQMEAARAYGFSEWLAFRRILFPQMAQLALPAVVNNWLVLLKTT 193

Query: 339 SLAVAVGFADLV 350
           ++A  +G  D++
Sbjct: 194 AIASLIGLHDVM 205


>gi|325293283|ref|YP_004279147.1| Inner membrane arginine ABC transporter permease protein
           [Agrobacterium sp. H13-3]
 gi|325061136|gb|ADY64827.1| Inner membrane arginine ABC transporter permease protein
           [Agrobacterium sp. H13-3]
          Length = 276

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 51/81 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L+  TAA+ AEI+R  + +VPRGQ+E A +LGL+     R V+LPQA+   + P  ++
Sbjct: 150 LSLTLNTAAYQAEILRGAIRSVPRGQIEGAASLGLSKFITFRKVILPQALIVALRPYGNE 209

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + ++K S++   V   DL+ 
Sbjct: 210 IILMIKGSAVVSIVTVFDLMG 230


>gi|116617289|ref|YP_817660.1| ABC-type amino acid transport permease component [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096136|gb|ABJ61287.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 240

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 2/113 (1%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS   A+ +AE+ +S  ++V  GQ EAA+ +GL+  +    + LPQ +   +P   + 
Sbjct: 102 IALSLLFASNLAEVFKSAYLSVNTGQREAALMVGLSEWQTFYRITLPQTIVVALPNFANT 161

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMI 381
              L+K+++LA  +G  D++  G  +I++     ++E  L    IY  L ++I
Sbjct: 162 VAALIKDAALAYVIGLLDMMGAGDNLISRNFGHHSLETYLALAIIYWILFVII 214


>gi|304395107|ref|ZP_07376991.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357360|gb|EFM21723.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 234

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 51/89 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS Y   +++E++R   +AV RGQ +A  +LG + R+    V+ PQA+   +P   + 
Sbjct: 94  IGLSLYHGGYLSEVMRPAYLAVERGQHDATDSLGYSFRQKMLRVVGPQAVHFALPGYGNA 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            + L+ N +L + +G AD+++    I+ +
Sbjct: 154 IIYLIHNVALVMYIGAADVMATAHLIMER 182


>gi|227432937|ref|ZP_03914879.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351283|gb|EEJ41567.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 236

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 77/149 (51%), Gaps = 10/149 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A P++ +       LP+L+ + +  +LH++  V            +P   ++ I  +  
Sbjct: 61  RATPMVLLILLFYSTLPSLLNVLVNQKLHWNVKVFDT---------NPIIYAI-IVFALI 110

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A ++E+ RS ++ +  GQ EAA+ +GLT  +A   +++PQA+ S +P + +  LN+LK
Sbjct: 111 AVANLSEVFRSAILTIDPGQKEAALMVGLTPIQAYYRIIIPQALVSAVPNIGNLTLNILK 170

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +SLA  +   ++ +V  T  + T    E
Sbjct: 171 GTSLAFMMTVQEVTAVAKTAASYTYDYTE 199


>gi|33151971|ref|NP_873324.1| arginine transporter permease subunit ArtM [Haemophilus ducreyi
           35000HP]
 gi|33148193|gb|AAP95713.1| arginine transport system permease protein [Haemophilus ducreyi
           35000HP]
          Length = 227

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 75/145 (51%), Gaps = 5/145 (3%)

Query: 252 GQFNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           GQF +I  S V    S  +    +AL+  +AA+  ++    L AVP+G+ +A  ALGL+ 
Sbjct: 73  GQFKWITESVVWQFLSDAWFCAVLALALNSAAYSTQLFYGALKAVPKGKWQACSALGLS- 131

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R  T  +++P A+R  +P  +++ + + K +SLA  +   D++     +      A+ I 
Sbjct: 132 RLDTLKIMIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGIEYDALAIY 191

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
            I   IYL ++ ++   + ++  ++
Sbjct: 192 GIAGLIYLIITGIMTFILRKVETRV 216


>gi|224368337|ref|YP_002602500.1| ABC-type arginine/histidine transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223691053|gb|ACN14336.1| ABC-type arginine/histidine transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 230

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQ--FNFIGGS---TVSPEFMSLYIALSCYTAAF 280
           T +I G+P LVLI L Y   +  P L Q    F G      + P    + + +     AF
Sbjct: 55  TTVIRGIPELVLILLVY---YGAPTLIQDMAAFFGQEIYVEIKPMVAGI-LTIGFIYGAF 110

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E+ R   +AVP+GQ+EAA A G+      R +LLPQ  R  IP L + ++ L+K ++L
Sbjct: 111 ATEVFRGAFLAVPKGQIEAAQACGMGPLLVFRRILLPQMWRFAIPGLGNVWMVLIKATAL 170

Query: 341 AVAVGFADLV 350
              +   +L+
Sbjct: 171 VSVIQLPELM 180


>gi|209518288|ref|ZP_03267114.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501308|gb|EEA01338.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 249

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL--VLLPQAMRSI 323
           F  + + LS +  AF AE +R+G  A+P   +E A +LG    +ATR   + LP A R+ 
Sbjct: 116 FFWVVLVLSLHKGAFHAEALRAGFDALPVQTLEGAASLGFD--RATRFWRIELPLAFRTA 173

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +P L + ++ L+K ++LA A+   DL      I  Q    + ++++
Sbjct: 174 LPALVNNFVELVKATALASAIAVGDLTYQSIMIWTQRDNVLALMVL 219


>gi|295098054|emb|CBK87144.1| L-histidine ABC transporter membrane protein/L-arginine ABC
           transporter membrane protein/L-lysine ABC transporter
           membrane protein/L-ornithine ABC transporter membrane
           protein [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 228

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFI 281
           T LI G+P LVL+ L +   Q+  +    G  + IG   +  + M +  I L     A+ 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALN----GVTDAIGMEQIDIDPMVAGIITLGFIYGAYF 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L 
Sbjct: 109 TETFRGAYMAVPKGHIEAATAYGFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALV 168

Query: 342 VAVGFADLVS 351
             +G  D+V 
Sbjct: 169 SLLGLEDVVK 178



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-RLSANKLVAWICRVYVEVFRNIPPL 142
            ++  IL G + T  LA S ++ A +IG L GAG +LSAN+ +A I   Y  + R +P L
Sbjct: 4   GFSGVILQGALVTLELAISSVVLAVLIG-LAGAGAKLSANRPLALIFEGYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|260891038|ref|ZP_05902301.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
 gi|260859065|gb|EEX73565.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
          Length = 219

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 30/156 (19%)

Query: 191 VFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           VFS ++GIV +L       A R     + +  +  PL+    FL FGLP    I + +  
Sbjct: 29  VFSILIGIVCALVLYYRVPAARQIVGIYIELSRNTPLVIQLFFLYFGLPK---IGITFNS 85

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H    V+G  +F+GGS                   ++ E  RSGL +V +GQ E+ +++G
Sbjct: 86  HICA-VIG-LSFLGGS-------------------YMCEAFRSGLESVTKGQRESGLSIG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           LT  +    V+LPQA     P + +  + LLK +S+
Sbjct: 125 LTESQLITNVILPQAFTVSFPAIAANIIFLLKETSV 160


>gi|119383470|ref|YP_914526.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373237|gb|ABL68830.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 220

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 62/122 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ Y + + AEI RSG  AVP GQ+EAA A+G+      R VLLP  + S +P L + 
Sbjct: 91  LGLTIYGSPYFAEIFRSGFRAVPHGQIEAARAIGMAEPTIVRRVLLPLGLVSSLPALVNF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K + +   +   +L+     +  +T + +E  L+    + +L   I+    RL  
Sbjct: 151 SIILTKETVILSIITVPELMYQVSRMSTETFRYLEANLVLALFFWALVETISRVGRRLET 210

Query: 391 KI 392
           +I
Sbjct: 211 RI 212


>gi|126739645|ref|ZP_01755337.1| ABC transporter, membrane spanning protein (amino acid)
           [Roseobacter sp. SK209-2-6]
 gi|126719291|gb|EBA16001.1| ABC transporter, membrane spanning protein (amino acid)
           [Roseobacter sp. SK209-2-6]
          Length = 209

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 47/78 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   A ++AE  R G  A+P  QM AA +LG+T  +A   +++PQ +R +  P+T+Q 
Sbjct: 86  GLTFNCAGYLAENFRGGFQAIPETQMRAARSLGMTATQAYLRIVIPQVLRIVYHPVTNQM 145

Query: 332 LNLLKNSSLAVAVGFADL 349
           +  +  SSL + VGF +L
Sbjct: 146 VWAVLMSSLGMLVGFREL 163


>gi|317049497|ref|YP_004117145.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951114|gb|ADU70589.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 235

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 9/136 (6%)

Query: 265 EFMSLYIA----LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           +FMS  +A    LS Y   +++E++R   +AV RGQ +AA ++G + R     ++ PQA+
Sbjct: 84  DFMSATVASMVGLSLYHGGYLSEVMRPAFLAVERGQHDAADSMGYSFRHKMLRIVGPQAL 143

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII----NQTGQAIEIILIWMFIYLS 376
              +P   +  + L+ N +L + +G AD+++    I+    NQ      ++L  ++  L 
Sbjct: 144 HIGLPGYGNAIIYLIHNVALVMYIGAADVMATAHLIMERDYNQYQFGTYLVLAVLYSLLC 203

Query: 377 L-SIMIALFMNRLNAK 391
           L + +I  +  R +AK
Sbjct: 204 LVAWLIVRYFERRHAK 219


>gi|206580155|ref|YP_002238927.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935857|ref|YP_003439916.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|206569213|gb|ACI10989.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288890566|gb|ADC58884.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 224

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 14/164 (8%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LVLI   Y   +  P+L       G T+S  +++  +A+S Y + F AEI RSG+ +
Sbjct: 67  IPPLVLIVWAY---YCLPILF------GLTLS-SYLTCVLAISLYGSVFFAEIFRSGMQS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  G +EA +++G++  K    +  P A   I+P   SQ +  +KNS LA  +   +++ 
Sbjct: 117 VDHGLVEAGLSVGMSPLKVLVRITAPVAFLRILPAFVSQCVMSVKNSVLASYIATGEILY 176

Query: 352 VGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLNAK 391
            G  +   T + +E    + L ++   L LS++ +    R+ ++
Sbjct: 177 QGQRLSTATFRPLETLTFVALFFVATILPLSLLASYAERRIRSR 220


>gi|319783615|ref|YP_004143091.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169503|gb|ADV13041.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 273

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           L Y   +   G P LV   L Y        +   +G ++F         F     A +  
Sbjct: 98  LAYCYVYFFRGTPLLVQTYLVYYGLGSFRVELQSVGLWDFF-----KDAFNCGVFAFALN 152

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI+R  + +VPRGQ E A +LGL   +  R ++LPQA+   + P  ++ + ++K
Sbjct: 153 TAAYQAEILRGAIESVPRGQWEGAASLGLHKLQTLRKIILPQALIVALRPYGNELILMVK 212

Query: 337 NSSLAVAVGFADLVS 351
            S++   +   DL+ 
Sbjct: 213 ASAIVAIITVYDLMG 227


>gi|325688759|gb|EGD30768.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 286

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 103 RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 150

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 151 NEAAYASETIRAAILSVDSGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 210

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 211 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 256


>gi|331002713|ref|ZP_08326228.1| hypothetical protein HMPREF0491_01090 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330407126|gb|EGG86630.1| hypothetical protein HMPREF0491_01090 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 223

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+ +S +  ++ I  S +  A + ++VR  +I++P+ Q E++ ALGL  R+    +++PQ
Sbjct: 86  GADISGDLAAV-IVFSLWGIAEMGDLVRGAIISIPKHQYESSEALGLDKRQTFIYIIIPQ 144

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            ++ +IP   +    ++K +SL + +G  +++ V   II 
Sbjct: 145 TVKRLIPLSINLITRMIKTTSLVLMIGVVEVIKVAQQIIE 184


>gi|49475423|ref|YP_033464.1| ABC transporter, permease protein [Bartonella henselae str.
           Houston-1]
 gi|49238229|emb|CAF27439.1| ABC transporter, permease protein [Bartonella henselae str.
           Houston-1]
          Length = 235

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 52/84 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +EI +   ++V  GQ+EA+ ALGL+       ++LPQAM   + PL ++++ ++K
Sbjct: 116 SAAYQSEIFKGSFLSVKAGQIEASKALGLSSSTTFFKIILPQAMVVALRPLGNEFILMIK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +S++A  +   DL+ +     ++T
Sbjct: 176 SSAIASLITIYDLMGIAKLTYSRT 199


>gi|304394879|ref|ZP_07376763.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357132|gb|EFM21495.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 241

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 30/197 (15%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+  +   ++   +LG VL       SR + ++    L   YI+ F   G+P L
Sbjct: 22  LSAAAVTVSVSLCAWLLGAMLGSVLCWMQIAGSR-WQQR----LAAGYITLFR--GVPEL 74

Query: 236 VLIALKY------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++I L Y             L F  P    F+  G       F++  IA+   + A+ + 
Sbjct: 75  LVIYLFYFGGRQVVSTVGTALGFQGP----FDVNG-------FVADAIAIGLISGAYQSG 123

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R    A+P G +EAA   G+      R +++PQA+R+ +P + +Q+ +++K S+L   
Sbjct: 124 VFRGAFYAIPGGTLEAATVTGMGRLMMFRRIIVPQALRTALPGMGNQWQSVIKESALVSV 183

Query: 344 VGFADLVSVGGTIINQT 360
            G  + ++   T  N T
Sbjct: 184 TGLVETMNQVSTAANST 200


>gi|220911892|ref|YP_002487201.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219858770|gb|ACL39112.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 233

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA+S  +A+F +EI+R+GL +V  G +EAA ++G+   +    V  P+ +R + P
Sbjct: 89  FTAGLIAMSLNSASFFSEIIRAGLKSVNAGHLEAADSVGMNPLQKFVRVTAPEGIRLMTP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  +  + +LK S+    +   DL+  G    N T   +E + +   +YL   +M +L M
Sbjct: 149 PYINNCIIMLKESAQISVITVPDLMLQGQKAYNSTYNVMETLGVVAAMYL---VMTSLLM 205


>gi|302671820|ref|YP_003831780.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus
           B316]
 gi|302396293|gb|ADL35198.1| amino acid ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 219

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++ E +RSGL +V R Q E+A++LG+T  +    ++LPQA    IP   +  + LLK +
Sbjct: 99  AYMIETIRSGLESVDRIQSESALSLGMTKGQVFFHIVLPQAFSISIPGFVANVIFLLKET 158

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           S+   +   DL+     +I    + IE + + +  YL
Sbjct: 159 SVFSTISLMDLMFTAKDLIGMYAKTIECLFLLVVYYL 195


>gi|309779617|ref|ZP_07674376.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308921558|gb|EFP67196.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 258

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 1/129 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ +  AL+   +A +AEI R  + ++P+ Q EAA +L  T R     ++LPQ ++ +
Sbjct: 124 PDWLKVTFALALPASAHVAEIFRGAVQSIPQTQWEAAASLAFTRRDILWRIVLPQCVQRM 183

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   + Y  +   ++LA  VG  DL+       N   +    +L + F  L+L  +   
Sbjct: 184 LPSWMNLYAVITMGTALASLVGVHDLLDTAQIASNTVNRTPFTVLTY-FTVLALFFLYCY 242

Query: 384 FMNRLNAKI 392
            ++RL  ++
Sbjct: 243 PISRLTRRM 251


>gi|218674227|ref|ZP_03523896.1| amino acid ABC transporter permease [Rhizobium etli GR56]
          Length = 276

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R V+LPQA    + P  ++ 
Sbjct: 151 AMTINTAAYQAEILRGAIESVPHGQREAAAALGIHKAIAFRKVILPQAFIVALRPYGNEI 210

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + L+K S++   +   DL+ 
Sbjct: 211 ILLIKGSAVVAIITVLDLMG 230


>gi|972903|gb|AAA95980.1| ArtM [Haemophilus influenzae]
          Length = 227

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 13/180 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYT 277
           LY++ F   G P LV    ++ L +  P  GQF +I  S     +S  +    +AL   +
Sbjct: 51  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWIIDSPLWYVLSNAWFCAALALRLNS 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  ++    + A+P+GQ E+  ALGL +R  T  +L+P A++  +P  +++ + + K 
Sbjct: 103 AAYSTQLFHGAVKAIPKGQWESCGALGL-NRIQTLKILIPYALKRALPSYSNEIILVFKG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++LA  +   D++     +      A+ I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 162 TALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRKLEKKVLAFER 221


>gi|254360616|ref|ZP_04976765.1| possible arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261493367|ref|ZP_05989893.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496633|ref|ZP_05993013.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|153091156|gb|EDN73161.1| possible arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261307836|gb|EEY09159.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311011|gb|EEY12188.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 227

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 87/174 (50%), Gaps = 11/174 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAE 283
           L  G P L+    ++ L +  P  GQF +I  S     +S  +    +AL+  +AA+   
Sbjct: 55  LFTGTPLLI----QFFLIYSGP--GQFEWITESAAWVLLSDAWFCAMLALALNSAAYSTL 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +    + A+P+GQ E   ALGL+ R  T  +L+P A++  +P  +++ + + K +SLA  
Sbjct: 109 LFHGAVKAIPKGQWETCAALGLS-RLDTLKILVPYALKRALPSYSNEIVLVFKGTSLAST 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   D++     +      A+ I  +   IYL ++ ++ + + +L +++   E+
Sbjct: 168 ITIMDIMGYARQLYGTEYDALSIYGMAGVIYLVITGIMTIVLRKLESRVLAFER 221


>gi|254250639|ref|ZP_04943958.1| transport system membrane protein [Burkholderia cenocepacia PC184]
 gi|124879773|gb|EAY67129.1| transport system membrane protein [Burkholderia cenocepacia PC184]
          Length = 220

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 62/125 (49%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ Y  A+  E  RSG  AVP+G +EAA  LGL+  + T  V LPQ M  I+P LT+ 
Sbjct: 94  VGLALYAGAYFTEAFRSGFSAVPQGHVEAASCLGLSRWQTTFRVQLPQMMVLILPALTNL 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K +++   V   +L  V   I + +   +E +L     YL L  M       +  
Sbjct: 154 AIVLSKETAVLSIVTVPELTFVLTGIGSASFAFVETLLALSVCYLLLVEMATWAGTAVER 213

Query: 391 KIALK 395
           ++A +
Sbjct: 214 RVARR 218


>gi|294083878|ref|YP_003550635.1| putative permease of ABC transporter [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663450|gb|ADE38551.1| putative permease of ABC transporter [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 219

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 247 DKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           + P L Q  F G      G  +SP F+ +   LS   A ++AE  R G  A+P  Q+ AA
Sbjct: 66  NTPALLQLFFFGFGLGALGIHLSP-FLIVLFGLSFNNAGYLAETFRGGFNAIPNTQIRAA 124

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +LG++  +    + +PQ  R +  P+T+Q +  +  SSL + VGF +L
Sbjct: 125 RSLGMSITQTYLRIAIPQVFRIVYHPMTNQLVWSVLMSSLGMLVGFREL 173


>gi|104782329|ref|YP_608827.1| arginine/ornithine ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95111316|emb|CAK16036.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 229

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 9/132 (6%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           + T ++ G+P LVLI L +    D        LG   +I    ++P F++    +     
Sbjct: 51  VYTTVVRGIPDLVLILLVFYGGQDLVNRLALALGYEQYI---DINP-FIAGVCTMGFIFG 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+++E  R   +A+PRGQ EA  A G++  +    + +PQ +R  +P  T+ +L L K++
Sbjct: 107 AYLSETFRGAFLAIPRGQAEAGAAYGMSGLQVFWRISVPQMVRLALPGFTNNWLVLTKST 166

Query: 339 SLAVAVGFADLV 350
           +L   +G  D++
Sbjct: 167 ALISVIGLQDMM 178


>gi|170691908|ref|ZP_02883072.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143192|gb|EDT11356.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 237

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 1/171 (0%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+++ T++  G P  V + L Y   +   V+                +L +A +  T A+
Sbjct: 58  LVWLYTYIFRGTPLYVQLLLCYTGLYSLEVIRNHELTNAFFRDGMHCTL-LAFTLNTCAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI    + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++
Sbjct: 117 TTEIFAGAIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTV 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A      D++ +   + + T Q+     I   +YL +S  +     R   +
Sbjct: 177 AFTATVPDILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAERR 227


>gi|237808336|ref|YP_002892776.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500597|gb|ACQ93190.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 238

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 14/241 (5%)

Query: 162 SIVLPFG-MFLNNRGLSFP--TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            I++ +G  FL + G  F    +TM       VF F+L + +S+   R+S    +K    
Sbjct: 3   EILMQYGKAFLWSDGYRFTGVAVTMWLLVLSLVFGFMLALPMSI--ARVS----QKKALW 56

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +P+ +  T++  G P  V + + Y   +   ++   +F+     S  F    +AL+  T 
Sbjct: 57  MPV-WFYTYIFRGTPLYVQLLVFYSGVYTLSIVKDVDFLNLFFRS-GFNCTVLALALNTC 114

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++   + A+P G++EAA A G +     R +++P A+R  +P  +++ + +L  +
Sbjct: 115 AYTTEMLAGAIRAIPHGEIEAARAYGFSGFTLYRSIIIPSALRRALPAYSNEVILMLHAT 174

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLNAKIALKEK 397
           SLA      D++ +   +   T ++         IYL +S +++ LF  RL  K  LK  
Sbjct: 175 SLAFTATVPDILKIARDVNAATYKSFHAFGTAAAIYLIISFLLVGLF--RLAEKRWLKHL 232

Query: 398 K 398
           +
Sbjct: 233 R 233


>gi|241661637|ref|YP_002979997.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240863664|gb|ACS61325.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 244

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 24/150 (16%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P L    F+ FGLP+L +               Q N         E+ +  +       A
Sbjct: 68  PFLVQLMFMFFGLPSLGV---------------QIN---------EWQAALLTAVVNLGA 103

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EIVR+G+   PRGQ+EAA AL ++     R V+L  A++ + P L+SQ + ++  +S
Sbjct: 104 YITEIVRAGIQETPRGQLEAANALAMSRWAIFRHVVLRPALQKVWPALSSQIVIVMLGTS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   +   DL      I ++  +A E  L+
Sbjct: 164 VVSQIAAQDLTFAANFIQSRNFRAFETYLV 193


>gi|317014349|gb|ADU81785.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter
           pylori Gambia94/24]
          Length = 237

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 17/203 (8%)

Query: 191 VFSFVLG----IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           V SF+LG    IV++L      + F  +   A    Y+S  LI G P LV I + +   +
Sbjct: 44  VISFILGLLIAIVVALIKIAPPKRFIYRALLAGVNFYVS--LIRGTPLLVQIVVVF---Y 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P LG +       + P    + IA S    A+ +E +R+  ++VP+ Q +++++LGL 
Sbjct: 99  GLPALGVY-------MDPIPAGI-IAFSFNVGAYASETLRASFLSVPKDQWDSSLSLGLN 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   + I
Sbjct: 151 YLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDFLPI 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
            L    IY    +++ +   R+ 
Sbjct: 211 YLEAALIYWLFCLVLEVIQKRVE 233


>gi|241205167|ref|YP_002976263.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240859057|gb|ACS56724.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA    I R+G  A+P GQ EAA+A GLT  +    +L PQAMR  +P L +  + LLK+
Sbjct: 100 AAITCAIFRAGFAALPGGQAEAALAAGLTPLQTIFEILTPQAMRIALPGLGNYAVQLLKD 159

Query: 338 SSLAVAV 344
           +S+  A+
Sbjct: 160 TSVVSAI 166


>gi|39938563|ref|NP_950329.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39721672|dbj|BAD04162.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 373

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS     F+  + + G   V +GQ+EAA +LGL  ++    V  PQA++  +P + +Q++
Sbjct: 244 LSRTNNVFVKGVKQVGSKFVDKGQVEAAQSLGLNKKQTFYYVTFPQALKKSVPLVVAQFV 303

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K  +  V +   D+  V    +N TG  +   +I  F+YL L   I +    L  K+
Sbjct: 304 TNIKACTFFVLIALIDMSFVTNDAMNVTGDLVAPFVILSFVYLVLIQFINMLSKYLEKKL 363


>gi|322513413|ref|ZP_08066529.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
 gi|322120801|gb|EFX92671.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
          Length = 115

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 46/78 (58%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + ++VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++K SSL
Sbjct: 1   MGDLVRGALASIEKYQIESAKALGLNRWQIFQYIELPQGTRRVLPRAINPFTRMVKTSSL 60

Query: 341 AVAVGFADLVSVGGTIIN 358
           A  +G  ++V VG  II 
Sbjct: 61  AALIGVFEMVKVGQQIIE 78


>gi|163802096|ref|ZP_02195992.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159174237|gb|EDP59045.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 225

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 6/151 (3%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV      QL+     + QF  +  +     +    +A    T+A+ AEI+R  + 
Sbjct: 62  GTPLLV------QLYLIYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAIN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P G++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  +   DL 
Sbjct: 116 GLPSGEVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLT 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
                +  +     E  L     Y++L+ +I
Sbjct: 176 GAARLVNARYYAPFESFLAAGLFYMALTFII 206


>gi|209516020|ref|ZP_03264880.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503480|gb|EEA03476.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 237

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 1/171 (0%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+++ T++  G P  V + L Y   +   ++   N +  +          +A +  T A+
Sbjct: 58  LVWLYTYIFRGTPLYVQLLLCYTGLYSLEIIRN-NELTNAFFRDGMHCTLLAFTLNTCAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI    + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++
Sbjct: 117 TTEIFAGAIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTV 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A      D++ +   + + T Q+     I   +YL +S  +     R   +
Sbjct: 177 AFTATVPDILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAERR 227


>gi|190895402|ref|YP_001985694.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190699347|gb|ACE93431.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 241

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 15/128 (11%)

Query: 231 GLPTLVLIALKYQLHFDKP--------VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           G+P L++I   Y ++F            +G   F+G     P F +  +A+   + ++ A
Sbjct: 67  GVPELLII---YLIYFGGSSAVTSIGKAMGYEGFLG----LPSFAAGALAVGIISGSYQA 119

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R   +A+ +G++EAA A+G+      R +++PQ +R  IP L + +   LK+S+L  
Sbjct: 120 EVFRGAYLAIAKGELEAASAIGMHRGMRFRRIIIPQVLRFAIPGLGNVWQLSLKDSALIS 179

Query: 343 AVGFADLV 350
             G A+L+
Sbjct: 180 VTGLAELM 187



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 13/77 (16%)

Query: 86  ATAILVGFVNTFWLAF-------------SGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           AT  L+GF +T W A              + +    ++G +V   +LS N L+  +  VY
Sbjct: 2   ATLELLGFGSTGWGALLILAALMTLAVTATALAIGAVLGAIVAGAKLSGNPLLVSLGNVY 61

Query: 133 VEVFRNIPPLVVIFFLY 149
             VFR +P L++I+ +Y
Sbjct: 62  TTVFRGVPELLIIYLIY 78


>gi|313673709|ref|YP_004051820.1| polar amino acid abc transporter, inner membrane subunit
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940465|gb|ADR19657.1| polar amino acid ABC transporter, inner membrane subunit
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 259

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 61/106 (57%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS +  ++I+EIVR  ++++ + Q  +  ALG++  +  + V+LPQ+   IIP L++  
Sbjct: 134 TLSLFEGSYISEIVRGSILSIDKQQWLSGYALGMSRIQVLKKVILPQSYPIIIPSLSNIL 193

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           ++ +K+SSL   +   +L       +++T    EI  +  F+YLS+
Sbjct: 194 VSTVKDSSLLSIISIYELTFEAQKAVSETFMTFEIWFMVAFLYLSI 239


>gi|218507415|ref|ZP_03505293.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli Brasil 5]
          Length = 194

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +S Y AA+ +EI RSG  AVP+G +EA   + LT R+    +LLP+    ++PP  + 
Sbjct: 93  IGISIYGAAYFSEIFRSGFQAVPKGHIEAGECVCLTRRQIVWRILLPEMTMLVLPPSVNM 152

Query: 331 YLNLLKNSS 339
            + L+K   
Sbjct: 153 VVILMKGDG 161


>gi|186894791|ref|YP_001871903.1| arginine transporter permease subunit ArtM [Yersinia
           pseudotuberculosis PB1/+]
 gi|186697817|gb|ACC88446.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 222

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 7/187 (3%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT  A PL+ I   L  G P LV I L Y      P + ++ ++  S +S  ++   IAL
Sbjct: 40  KTPIATPLVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLW-SLLSQPWLCAMIAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++ R++ R +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPSGQWQSCEALGMSKRQSLR-ILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           + K +SLA  +    L+ V G      G+  ++++      +YL ++ ++ L M  +  K
Sbjct: 158 VFKGTSLAYTI---TLMEVMGYSQLMYGRTYDVMVFGAAGVVYLCVNGLLTLLMRLVERK 214

Query: 392 IALKEKK 398
               E++
Sbjct: 215 ALAFERR 221


>gi|85704451|ref|ZP_01035553.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670859|gb|EAQ25718.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 237

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 253 QFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           Q    GG  V  P+++      S    A ++EI+R  + ++P GQ E+A +L  T  +  
Sbjct: 89  QITLPGGDKVMVPDWLKATFGFSLPVMANVSEILRGAVASIPSGQWESAESLAFTRGQTL 148

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII---- 367
           R ++LPQ +R ++PP  + Y  L   + +A  +G  + +      +   G   E +    
Sbjct: 149 RHIILPQCIRRMLPPWMNWYALLTLMTPMAAILGVNEALGNTQAAMEAAGSRPEFLIPFY 208

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           L  M I+  +   I++   RL  + A
Sbjct: 209 LFLMTIFFVVIYPISICTRRLEKRFA 234


>gi|322513521|ref|ZP_08066622.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinobacillus ureae ATCC 25976]
 gi|322120674|gb|EFX92565.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinobacillus ureae ATCC 25976]
          Length = 227

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 88/171 (51%), Gaps = 11/171 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVR 286
           G P LV    ++ L +  P  GQF +I  S     +S  +    +AL+  +AA+  ++  
Sbjct: 58  GTPLLV----QFFLIYHGP--GQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFH 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ E   ALGL+ R  T  +L+P A+R  +P  +++ + + K +SLA  +  
Sbjct: 112 GAVKAIPKGQWETCAALGLS-RLDTLKILIPYALRRALPSYSNEIILVFKGTSLASTITL 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++     +      AI I  I   IYL ++ ++ + + R+ AK+ + E+
Sbjct: 171 LDIMGYARQLYGTKYDAITIYGIAGAIYLVITGIMTILLRRVEAKVLVFER 221


>gi|229587792|ref|YP_002869911.1| putative amino acid transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359658|emb|CAY46506.1| putative amino acid transportsystem, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 221

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 8/133 (6%)

Query: 225 STFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYT 277
           +  L+F  P L  L+AL  +L  + P+L Q  F+       G  +S  F +  I ++   
Sbjct: 41  AALLVFRTPYLSRLVALYVELARNTPLLIQLFFVYFALPALGFNIS-GFWAAIITMTFLG 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E++R+G+ AVP  Q+E+  ++GL+  +  R V+LPQA    +P L + ++ LLK 
Sbjct: 100 GAYLTEVLRAGVEAVPLAQIESGKSIGLSDWQLLRHVILPQAGILSLPALFANFIFLLKE 159

Query: 338 SSLAVAVGFADLV 350
           +++  AV   +++
Sbjct: 160 TTVVSAVAVPEIL 172


>gi|22126709|ref|NP_670132.1| arginine transporter permease subunit ArtM [Yersinia pestis KIM 10]
 gi|45441074|ref|NP_992613.1| arginine transporter permease subunit ArtM [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595715|ref|YP_069906.1| arginine transporter permease subunit ArtM [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806633|ref|YP_650549.1| arginine transporter permease subunit ArtM [Yersinia pestis
           Antiqua]
 gi|108812796|ref|YP_648563.1| arginine transporter permease subunit ArtM [Yersinia pestis
           Nepal516]
 gi|145599621|ref|YP_001163697.1| arginine transporter permease subunit ArtM [Yersinia pestis
           Pestoides F]
 gi|149366606|ref|ZP_01888640.1| arginine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|153948343|ref|YP_001401593.1| arginine transporter permease subunit ArtM [Yersinia
           pseudotuberculosis IP 31758]
 gi|162418971|ref|YP_001606086.1| arginine transporter permease ArtM [Yersinia pestis Angola]
 gi|165924357|ref|ZP_02220189.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938923|ref|ZP_02227476.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009895|ref|ZP_02230793.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211309|ref|ZP_02237344.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399927|ref|ZP_02305445.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419856|ref|ZP_02311609.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424248|ref|ZP_02316001.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470084|ref|ZP_02334788.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           FV-1]
 gi|170024938|ref|YP_001721443.1| arginine transporter permease subunit ArtM [Yersinia
           pseudotuberculosis YPIII]
 gi|218928497|ref|YP_002346372.1| arginine transporter permease subunit ArtM [Yersinia pestis CO92]
 gi|229841311|ref|ZP_04461470.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843414|ref|ZP_04463560.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229895787|ref|ZP_04510957.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Pestoides A]
 gi|229903211|ref|ZP_04518324.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Nepal516]
 gi|270487002|ref|ZP_06204076.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294503341|ref|YP_003567403.1| arginine transport system permease protein [Yersinia pestis
           Z176003]
 gi|21959728|gb|AAM86383.1|AE013886_8 arginine 3rd transport system permease protein [Yersinia pestis KIM
           10]
 gi|45435933|gb|AAS61490.1| arginine transport system permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588997|emb|CAH20615.1| ABC arginine transporter, permease subunit artM [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776444|gb|ABG18963.1| arginine transport system permease protein [Yersinia pestis
           Nepal516]
 gi|108778546|gb|ABG12604.1| arginine transport system permease protein [Yersinia pestis
           Antiqua]
 gi|115347108|emb|CAL20001.1| arginine transport system permease protein [Yersinia pestis CO92]
 gi|145211317|gb|ABP40724.1| arginine transport system permease protein [Yersinia pestis
           Pestoides F]
 gi|149290980|gb|EDM41055.1| arginine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|152959838|gb|ABS47299.1| arginine ABC transporter, permease protein ArtM [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351786|gb|ABX85734.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           Angola]
 gi|165913070|gb|EDR31694.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923417|gb|EDR40549.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991291|gb|EDR43592.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207080|gb|EDR51560.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962597|gb|EDR58618.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050635|gb|EDR62043.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057097|gb|EDR66860.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751472|gb|ACA68990.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|229678981|gb|EEO75084.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Nepal516]
 gi|229689761|gb|EEO81822.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229697677|gb|EEO87724.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700710|gb|EEO88739.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Pestoides A]
 gi|262361381|gb|ACY58102.1| arginine transport system permease protein [Yersinia pestis
           D106004]
 gi|262365082|gb|ACY61639.1| arginine transport system permease protein [Yersinia pestis
           D182038]
 gi|270335506|gb|EFA46283.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294353800|gb|ADE64141.1| arginine transport system permease protein [Yersinia pestis
           Z176003]
 gi|320015800|gb|ADV99371.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 222

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 7/187 (3%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT  A PL+ I   L  G P LV I L Y      P + ++ ++  S +S  ++   IAL
Sbjct: 40  KTPIATPLVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLW-SLLSQPWLCAMIAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++ R++ R +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPSGQWQSCEALGMSKRQSLR-ILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           + K +SLA  +    L+ V G      G+  ++++      +YL ++ ++ L M  +  K
Sbjct: 158 VFKGTSLAYTI---TLMEVMGYSQLMYGRTYDVMVFGAAGVVYLCVNGLLTLLMRLVERK 214

Query: 392 IALKEKK 398
               E++
Sbjct: 215 ALAFERR 221


>gi|92114901|ref|YP_574829.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91797991|gb|ABE60130.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 243

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +  TAA+  EI    + A  RG++EAA A G++     R ++LP A R  +P   ++
Sbjct: 113 IAFTLNTAAYTTEIFHGAIKATSRGEIEAARAYGMSRGLMMRRIILPSAFRRALPAYGNE 172

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  S++A  V   DL      +  +     +  L    IYL L+  I      L  
Sbjct: 173 VIFMLHASAIASVVTIMDLTGAARFVYARFYAPFDAFLFVAAIYLCLTFAILYLFRYLEK 232

Query: 391 KI 392
           K+
Sbjct: 233 KL 234


>gi|86136436|ref|ZP_01055015.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85827310|gb|EAQ47506.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 248

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 9/165 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKYQLH 245
           +I + +F +G+++ LF       + +  G  +   LL I T +I  +P LVLI + Y + 
Sbjct: 35  QIALGAFGMGLIIGLFGA-----YGKLYGGPILRDLLAIYTTVIRAVPELVLILILYYVG 89

Query: 246 FDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            D    L Q    G   +S     +++ L     A+  EI+R  + AVP GQ+EAA A G
Sbjct: 90  TDLINKLAQTMGYGRVEISGVVAGIWV-LGIVQGAYATEILRGAIQAVPPGQIEAARAYG 148

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +      R V +P  M    P L + +L   K+++L   VGF +L
Sbjct: 149 MPALMTMRRVTIPAMMAFATPGLANLWLIATKDTALLAVVGFNEL 193


>gi|330891106|gb|EGH23767.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 209

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 60/112 (53%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G +     F  + I +S +  AF AE +R+G+ AVP   +EAA +L    R+    V L
Sbjct: 67  VGAANPLTPFAWVVIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFNSRQLLWNVQL 126

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q+   +E+++
Sbjct: 127 PLAVRFALPSLVNNLIDLVKMTAVASAIAVNDITYASIMIWTQSDNVLELMI 178


>gi|262043352|ref|ZP_06016480.1| histidine transport system permease HisM [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259039304|gb|EEW40447.1| histidine transport system permease HisM [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 238

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +V  G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVAAGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|205353467|ref|YP_002227268.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205273248|emb|CAR38211.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326628559|gb|EGE34902.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 235

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++L  A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSSFKMYRCIILLSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I + T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLF 221


>gi|315634949|ref|ZP_07890231.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Aggregatibacter segnis ATCC 33393]
 gi|315476501|gb|EFU67251.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Aggregatibacter segnis ATCC 33393]
          Length = 186

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 243 QLHFDKPVLGQ--FNFIGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +L  + P+L Q  F + G S V      F    I L+    +++AE +R GL A+ RGQ+
Sbjct: 60  ELSRNTPLLIQVFFLYFGLSKVGLKLDGFTCAIIGLAFLGGSYMAEAIRGGLEAISRGQL 119

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           E+A++LGLT  +A R VL PQA     P + +  L
Sbjct: 120 ESALSLGLTPVQAFRYVLFPQAFAIATPAIGANSL 154


>gi|157371561|ref|YP_001479550.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157323325|gb|ABV42422.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 234

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +V  G++EAA A G +  K  R ++LP A+R+ +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVSHGEIEAANAYGFSRFKMYRCIILPSALRTALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S  +I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFYAFGIAAVLYLIISYGLISLF 221


>gi|218458286|ref|ZP_03498377.1| ABC transporter, membrane spanning protein [Rhizobium etli Kim 5]
          Length = 204

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 51/84 (60%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A++ E++R  ++A+P GQ+EAA A G+      R V+LP  M + +P
Sbjct: 70  FLAAVVVLGIVQGAYMIEVLRGAILAIPIGQIEAASAFGMRPWLRFRRVVLPALMPNALP 129

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
            + + ++++ K+S+L   VG+ +L
Sbjct: 130 GMANLWMSVTKDSALIAVVGYQEL 153


>gi|163739646|ref|ZP_02147055.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis BS107]
 gi|163741365|ref|ZP_02148756.1| ABC transporter, permease protein, HisMQ family [Phaeobacter
           gallaeciensis 2.10]
 gi|161385099|gb|EDQ09477.1| ABC transporter, permease protein, HisMQ family [Phaeobacter
           gallaeciensis 2.10]
 gi|161387105|gb|EDQ11465.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis BS107]
          Length = 238

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 10/126 (7%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G+THR+A   +L+PQ     +P L++ ++ L+K 
Sbjct: 98  GAFAANVLFGAMRAVPRAQIETAEAYGMTHRQAFWRILVPQMWTYALPGLSNLWMVLIKA 157

Query: 338 SSLAVAVGFADLV----SVGGTIINQ-TGQAIEIILIWMFI-----YLSLSIMIALFMNR 387
           + L   +G  D+V     +GG+   + T        +W F+     YL+ + +  + + R
Sbjct: 158 TPLLFLLGVEDIVYWARELGGSKTARFTDYPHGDWRMWYFLGLLVFYLAFTKLSEVVLER 217

Query: 388 LNAKIA 393
           +  +++
Sbjct: 218 IRTRLS 223


>gi|325978428|ref|YP_004288144.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|325178356|emb|CBZ48400.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 227

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 12/179 (6%)

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALS 274
           L IS    + +P L  I   Y +L  + P+L Q  F+       G  +S E M   + L 
Sbjct: 37  LLISLIKYYKIPVLSQICQVYIELSRNTPLLIQLYFLYFGLPKIGIVLSSE-MCAVVGLI 95

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               +++AE  RSGL A+ + Q E  +++GL   +    V+ PQA+   +P L +  + L
Sbjct: 96  FLGGSYMAESFRSGLEAISKTQYEVGLSIGLKPVQNFFYVIFPQALAVSLPSLVANVIFL 155

Query: 335 LKNSSLAVAVGFADLVSVGGTIIN---QTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           +K +S+   V  ADL+ V   +I    +T +A + ++L ++ + L +S++  L   RL 
Sbjct: 156 IKETSVFSIVALADLMYVAKDLIGLYYETDEALLMLVLAYLIVLLPISLVARLIERRLR 214



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             V T  LAF G++ A ++G L+   +     +++ IC+VY+E+ RN P L+ ++FLY
Sbjct: 17  ALVLTIRLAFFGILGALVLGLLISLIKYYKIPVLSQICQVYIELSRNTPLLIQLYFLY 74


>gi|197294378|ref|YP_001798919.1| ABC-type arginine transport system,permease component [Candidatus
           Phytoplasma australiense]
 gi|171853705|emb|CAM11602.1| ABC-type arginine transport system,permease component [Candidatus
           Phytoplasma australiense]
          Length = 354

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 14/181 (7%)

Query: 182 TMDTNAKIFVFSFV-------LGIVLSLFATR---LSRHFHEKTGKALPLLY--ISTFLI 229
           T+ T  K F+ SF+       LG +L+L   +   L +H+ +   K L  +Y   S F+ 
Sbjct: 130 TLPTYKKGFITSFIISIDSVILGFLLALIFVKTKTLIKHYQKTNQKNLMRVYRTFSFFIN 189

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +  L  I L  Q      +   F  +  +T++  F +    L   TAA + +I+   +
Sbjct: 190 KTISFLNAIPLTIQALLVFNLFNLFQILRNNTMN--FYAALFVLVLNTAANLVKIMMHNI 247

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             + +GQ+EA  ALG++H++    ++  Q ++   P +  Q++N +KN+SL   +G + L
Sbjct: 248 KILSQGQIEAGYALGMSHKQVFHYIIFEQGIKRSYPSVGQQFINNIKNTSLFQIIGLSSL 307

Query: 350 V 350
           +
Sbjct: 308 L 308


>gi|16262712|ref|NP_435505.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|307312874|ref|ZP_07592503.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|14523338|gb|AAK64917.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306899388|gb|EFN30021.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 232

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 17/207 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T AK+FV S +L ++  L        S       G A       T    G P +++I L 
Sbjct: 17  TVAKVFVCSLILMVIFGLLGASAKLSSNRLANAVGNAY------TVFFRGTPEILVILL- 69

Query: 242 YQLHFDKPV-LGQFNFIGGSTVS----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             L+F   V L     +   +V+    P F +  IA++    ++  E  R     V  G 
Sbjct: 70  --LYFGSAVSLTTIARVFDPSVAFVDIPPFWAGSIAIALVVGSYATETFRGAFNGVKSGS 127

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALG+   +    + +P+  R  +PP  +  L+L+K+++L   +G  + + V    
Sbjct: 128 IEAARALGMNGLQTFFYIRIPEMWRIALPPFGNHMLSLIKDTALISIIGLNETLFVAKQA 187

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIAL 383
            + TG+   + ++   IYL  S  I +
Sbjct: 188 ASTTGKPFTMYIVVGLIYLGFSTAITI 214


>gi|237650052|ref|ZP_04524304.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CCRI 1974]
 gi|237822719|ref|ZP_04598564.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CCRI 1974M2]
          Length = 226

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 12/171 (7%)

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIA 282
           + +P L  +A  Y +L  + P+L Q  F+       G  +S E  +  + L     +++A
Sbjct: 44  YRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCAT-LGLVFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL A+ + Q E  +A+GLT  +    V+LPQA    +P  ++  + L+K +S+  
Sbjct: 103 ESFRSGLEAISQTQQEIGLAIGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           AV   DL+ V   +I    +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 163 AVALTDLMYVAKDLIGLYYETDIALAMLVVAYLIMLLPISLVFSWIERRLR 213


>gi|85057915|ref|YP_456831.1| ABC-type amino acid transport system, permease and periplasmic
           component [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84790020|gb|ABC65752.1| ABC-type amino acid transport system, permease and periplasmic
           component [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 598

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)

Query: 258 GGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           G    +PE   +Y   I L   +A  I  I+   +  + +GQ EAA+ALG+T R+    V
Sbjct: 457 GWRAYNPELNPMYSGVIVLLLNSAVSITSILLQNIKFLDKGQEEAALALGMTQRQTFFFV 516

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +LPQ ++  +P +  Q++  +K+S+     VG  D+     T I QTG       I   I
Sbjct: 517 ILPQTLKRSLPFVVQQFIVNIKDSACFGGLVGLLDVAWKAKTQIVQTGSIAIPYAITACI 576

Query: 374 YLSLSIMIALFMNRLNAK 391
           YL L  +  LF+  L  +
Sbjct: 577 YLLLITIANLFVKYLEKQ 594


>gi|228476976|ref|ZP_04061614.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus salivarius SK126]
 gi|228250995|gb|EEK10166.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus salivarius SK126]
          Length = 307

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 8/131 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+++E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 170 AFAFNEAAYMSETIRAAIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSL 229

Query: 332 LNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA + G  ++ +    +GG       + I + L    +Y ++SI+I      
Sbjct: 230 IGLTKGTSLAFSAGIVEMYAQAQILGGADYRYFERYISVAL----VYWAISILIEYIGRS 285

Query: 388 LNAKIALKEKK 398
           +   +A+K  +
Sbjct: 286 VENHMAIKAPE 296


>gi|119946456|ref|YP_944136.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865060|gb|ABM04537.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 224

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 252 GQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            QF+ I  + +   F   +    +A +  T A+ AEI+R  +  +P+ ++EAA A G++ 
Sbjct: 77  AQFDLIHETWLWHYFQEAWFCALLAFTLNTGAYTAEIIRGVISTMPKSELEAAKAYGMSE 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R+  R + LP ++R  +P  +++ + ++  S++A  V   D+    
Sbjct: 137 RQILRRITLPNSLRRALPAYSNEIIFMIHGSAIAGIVTIVDITGAA 182


>gi|58698603|ref|ZP_00373500.1| amino acid ABC transporter, permease protein SP1502 [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630094|ref|YP_002726885.1| amino acid ABC transporter, permease [Wolbachia sp. wRi]
 gi|58534873|gb|EAL58975.1| amino acid ABC transporter, permease protein SP1502 [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225592075|gb|ACN95094.1| amino acid ABC transporter, permease [Wolbachia sp. wRi]
          Length = 215

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 49/80 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+IAEI+R+G+  + + Q EAA  L +      R ++LPQ +++I+P + ++
Sbjct: 88  IAFGLNSCAYIAEILRAGIETISKNQFEAAKTLQIPSFYMWRDIILPQVIKNILPAMINE 147

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            + LLK ++L   +G  D++
Sbjct: 148 IIALLKETALISTIGGVDIM 167


>gi|324991750|gb|EGC23682.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 286

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 103 RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 150

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 151 NEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 210

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 211 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 256


>gi|190892107|ref|YP_001978649.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190697386|gb|ACE91471.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 276

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA    + P  ++ 
Sbjct: 151 AMTINTAAYQAEILRGAIESVPHGQHEAAAALGIHKVMAFRKIVLPQAFIVALRPYGNEI 210

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + L+K S++   +   DL+ 
Sbjct: 211 ILLIKGSAVVAIITVLDLMG 230


>gi|221231514|ref|YP_002510666.1| putative amino-acid ABC transporter integral membrane protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225854222|ref|YP_002735734.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|220673974|emb|CAR68484.1| putative amino-acid ABC transporter integral membrane protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225722358|gb|ACO18211.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
          Length = 206

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 44/212 (20%)

Query: 193 SFVLGIVLSLFATRLSRHF-----------HEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           SF+LG+++S+      RH+           + +  +  PLL    FL FGLP +      
Sbjct: 11  SFLLGLIVSII-----RHYRILVLSQVATAYIELSRNTPLLIQLFFLYFGLPRI------ 59

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                            G  +S E  +  + L     +++AE  RSGL A+ + Q E  +
Sbjct: 60  -----------------GIVLSSEVCAT-LGLVFLGDSYMAESFRSGLEAISQTQQEIGL 101

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN--- 358
           A+GLT  +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    
Sbjct: 102 AIGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYY 161

Query: 359 QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +T  A+ ++++ ++ + L +S++ +    RL 
Sbjct: 162 ETDIALAMLVVAYLIMLLPISLVFSWIERRLR 193


>gi|171320702|ref|ZP_02909716.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171094062|gb|EDT39158.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 261

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P++  + + L+   +A  AEI R  + ++P  Q +AA +L  +  +  R ++LPQ +  +
Sbjct: 127 PDWFKVTLGLALPASANFAEIFRGAIQSIPHAQWDAARSLAFSRVQVFRWIILPQCISRM 186

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           +PP  + Y ++   ++LA  VG  DL+       N   +A
Sbjct: 187 LPPWMNLYASIAMATALASLVGVHDLLDTAQVASNTVARA 226


>gi|119383778|ref|YP_914834.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373545|gb|ABL69138.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 223

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 61/124 (49%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL  + A +I+E+VR  + AVP     AA  LG+T  +    V+LP  +R   P
Sbjct: 91  FTAGTVALGLFAAGYISEVVREAVQAVPGNLRRAARGLGMTRFQEYWYVILPLGIRQGFP 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 L ++K++S+   +G+ +L+     II +T   + ++ +    Y  +   +++  
Sbjct: 151 SWLGIILGIVKDTSVVAVIGYVELLRATQNIITRTQDPLPLLSLAAVFYFLICFPLSMLG 210

Query: 386 NRLN 389
            RL 
Sbjct: 211 RRLE 214


>gi|325695202|gb|EGD37103.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 286

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 103 RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 150

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 151 NEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 210

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 211 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 256


>gi|301628866|ref|XP_002943567.1| PREDICTED: hypothetical protein LOC100491525 [Xenopus (Silurana)
           tropicalis]
          Length = 800

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 49/84 (58%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  I L    +A+ AE  R+G+ AV  GQ EAA+A+G+      R V+LPQA R  +P
Sbjct: 80  FQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAALAMGMRPMLLMRRVILPQAFRIALP 139

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
           P  +  + +LK+SSL   +  A++
Sbjct: 140 PYGNTLVMMLKDSSLVSTITVAEM 163


>gi|260461732|ref|ZP_05809978.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785284|ref|YP_004144760.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032373|gb|EEW33638.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171172|gb|ADV14710.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 250

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFD--KPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           LL + T LI  +P LVLI L Y    D    +L    +       P  M+  +AL     
Sbjct: 68  LLQVYTTLIRAVPELVLILLIYFAVPDLINRLLDTLGYGRIDVSGP--MAGIVALGFVQG 125

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  ++AVP+GQ+EA  A G+      R + +P  +   IP L + +L   K +
Sbjct: 126 AYATEVLRGAILAVPQGQIEAGRAFGMNPTMLMRRITMPAMLPFAIPGLANLWLVAFKGT 185

Query: 339 SLAVAVGFADL 349
           +L   VGF +L
Sbjct: 186 ALLAVVGFNEL 196


>gi|315222025|ref|ZP_07863936.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315188991|gb|EFU22695.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 269

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 51/86 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P ++   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ +  R V++P A    
Sbjct: 122 PAYLFAIVAFAFNEAAYASETIRAAILSVDAGEIEAARSLGMTNGQVYRRVIIPNAAVVA 181

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
            P L +  + L K +SLA + G  ++
Sbjct: 182 TPTLINSLIGLTKGTSLAFSAGVVEI 207


>gi|324994093|gb|EGC26007.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
          Length = 286

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 103 RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 150

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 151 NEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 210

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 211 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 256


>gi|319939693|ref|ZP_08014052.1| amino acid ABC transporter permease [Streptococcus anginosus
           1_2_62CV]
 gi|319811282|gb|EFW07588.1| amino acid ABC transporter permease [Streptococcus anginosus
           1_2_62CV]
          Length = 269

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 69/132 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P ++   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ +    V++P A    
Sbjct: 122 PAYLFAIVAFAFNEAAYASETIRAAILSVDAGEIEAARSLGMTNGQVYCRVIIPNAAVVA 181

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L +  + L K +SLA + G  ++ +    +     +  E  +    +Y  ++I+I  
Sbjct: 182 TPTLINSLIGLTKGTSLAFSAGVVEIFAQAQILGGADYRYFERFISVALVYWGVNIVIEA 241

Query: 384 FMNRLNAKIALK 395
           F   +  K+A++
Sbjct: 242 FGRFIEKKMAIE 253


>gi|152982785|ref|YP_001351725.1| ABC-type amino-acid transport system, permease component
           [Janthinobacterium sp. Marseille]
 gi|151282862|gb|ABR91272.1| ABC-type amino-acid transport system, permease component
           [Janthinobacterium sp. Marseille]
          Length = 223

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 59/105 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G++AV RGQ+EAA++L +T  +  R ++L  A++ I 
Sbjct: 89  EMQAAILAMVINLGAYSTEIIRAGVVAVARGQIEAALSLSMTRVQIFRHIILRPALQKIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           P L+SQ + ++  S++   +   +L      I  +  +A E  LI
Sbjct: 149 PALSSQIVIVMLGSAVCSQIAVEELSFAANFIQGRNFRAFEAYLI 193


>gi|218461591|ref|ZP_03501682.1| amino acid ABC transporter permease [Rhizobium etli Kim 5]
          Length = 276

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA    + P  ++ 
Sbjct: 151 AMTINTAAYQAEILRGAIESVPHGQHEAAAALGIHKAIAFRKIILPQAFIVALRPYGNEI 210

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + L+K S++   +   DL+ 
Sbjct: 211 ILLIKGSAVVAIITVLDLMG 230


>gi|218678907|ref|ZP_03526804.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894]
          Length = 276

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA+   + P  ++ 
Sbjct: 151 AMTINTAAYQAEILRGAIQSVPHGQREAAAALGIHKFIAFRKIILPQALIVALRPYGNEI 210

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + L+K S++   +   DL+ 
Sbjct: 211 ILLIKGSAVVAIITVLDLMG 230


>gi|119387585|ref|YP_918619.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378160|gb|ABL72923.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 230

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 9/152 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y  HF    LG F    G  +SP F+S+ I ++   A ++ E  R  L A+P  Q  AA 
Sbjct: 84  YMAHFG---LGSF----GLHLSP-FLSILIGITFNNAGYLTENFRGALKAIPDTQTRAAR 135

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQT 360
           +LG+    A R V+LPQ +R    P+T+Q +  +  +SL V VG   DL  V   +   T
Sbjct: 136 SLGMGAAGAFRHVVLPQMLRISFLPMTNQMVWAILMTSLGVTVGMNTDLYGVTQDLNALT 195

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +  E+  +   I+ +++ ++ L    + A++
Sbjct: 196 FRTFELFALAAVIFYAITKIVTLGARLIAARL 227


>gi|288905438|ref|YP_003430660.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|288732164|emb|CBI13729.1| putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
          Length = 227

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 12/179 (6%)

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALS 274
           L IS    + +P L  I   Y +L  + P+L Q  F+       G  +S E M   + L 
Sbjct: 37  LLISLIKYYKIPVLSQICQVYIELSRNTPLLIQLYFLYFGLPKIGIILSSE-MCAVVGLI 95

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               +++AE  RSGL A+ + Q E  +++GL   +    V+ PQA+   +P L +  + L
Sbjct: 96  FLGGSYMAESFRSGLEAISKTQYEVGLSIGLKPVQNFFYVIFPQALAVSLPSLVANVIFL 155

Query: 335 LKNSSLAVAVGFADLVSVGGTIIN---QTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           +K +S+   V  ADL+ V   +I    +T +A + ++L ++ + L +S++  L   RL 
Sbjct: 156 IKETSVFSIVALADLMYVAKDLIGLYYETDEALLMLVLAYLIVLLPISLVARLIERRLR 214



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             V T  LAF G++ A ++G L+   +     +++ IC+VY+E+ RN P L+ ++FLY
Sbjct: 17  ALVLTIRLAFFGILGALVLGLLISLIKYYKIPVLSQICQVYIELSRNTPLLIQLYFLY 74


>gi|260575385|ref|ZP_05843384.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022305|gb|EEW25602.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 250

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 2/171 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-LSCYTAA 279
           LL + T ++  +P LVLI + Y    D  V      +G   +    ++  I  L     A
Sbjct: 67  LLAVYTTVVRAVPELVLILILYYAGTDA-VNQMLVALGYERIQLSGLAAGIGVLGIVQGA 125

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E++R  ++AVP GQ+EAA A+G+      R + LP  +   +P L + +L   K+++
Sbjct: 126 YATEVLRGAILAVPAGQIEAARAMGMPPVLLARRITLPAMLSFALPGLANLWLVATKDTA 185

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           L   VGFA+L          T       +    +YL++S+   L   RL A
Sbjct: 186 LLAVVGFAELTQETRQAAGATKAYFTFFMAAGVLYLAISLGSGLVFGRLEA 236


>gi|223933461|ref|ZP_03625445.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|223897834|gb|EEF64211.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
          Length = 220

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 17/213 (7%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLH 245
           F  +LG+V ++      R  +          +  P+L       +G+P LVL  L  +  
Sbjct: 8   FGLILGLVFAIVKINRVRFLYPVQAVFVSFLRGTPILVQLMLTYYGIP-LVLRGLNQEYG 66

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D  +    N I      P  +    A +   AA+++E +R+ + AV  G++EAA +LG+
Sbjct: 67  LDWNI----NAI------PAAVFAITAFAFNEAAYMSESIRAAIQAVSPGEIEAARSLGM 116

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +  R +++P A     P L +  + L K +SLA + G  ++ +          +  E
Sbjct: 117 TSGQVYRRIIIPNAAVIATPSLINTLIGLTKGTSLAFSAGIVEVYAQAQIQGGADYRYFE 176

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +    +Y +LS++I  F   L  K+A++  +
Sbjct: 177 RYISVSLVYWALSVLIESFGRFLENKMAIQAPE 209


>gi|87121345|ref|ZP_01077235.1| putative transport system permease abc transporter protein
           [Marinomonas sp. MED121]
 gi|86163502|gb|EAQ64777.1| putative transport system permease abc transporter protein
           [Marinomonas sp. MED121]
          Length = 242

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 11/197 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALKYQL 244
           +I +  F+ G+V+  F          K GK++    L    T ++  +P LVLI L Y  
Sbjct: 34  EIAILGFLFGLVIGFFGAL------GKLGKSIVCRDLWSCYTTVVRAIPELVLILLIY-F 86

Query: 245 HFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                +    + +G S +    F++  + +S    A+  E+VRS ++A+P GQ+EAA A 
Sbjct: 87  ALPNLLNSLLSLVGISNIEINGFIAGVLVISFVQGAYATEVVRSAMLAIPAGQIEAAHAF 146

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            +   K    + LP  +   +P L++ +L   K+++L   VGF +L          T + 
Sbjct: 147 AMPKYKILYRISLPAMLPHALPGLSNLWLIATKDTALLAVVGFTELTLAARQAAGATKEQ 206

Query: 364 IEIILIWMFIYLSLSIM 380
           +  + +   +YL +S++
Sbjct: 207 LLFLTVAGGLYLCISLV 223


>gi|307131971|ref|YP_003883987.1| Octopine transport system permease occQ [Dickeya dadantii 3937]
 gi|306529500|gb|ADM99430.1| Octopine transport system permease protein occQ [Dickeya dadantii
           3937]
          Length = 240

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 52/87 (59%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   +A+   +A++  E+ R+  +AV  G++EAA A+G++  +    +LLPQ MR  
Sbjct: 99  PPFLIGALAIGLISASYQGEVYRAARLAVNSGELEAARAIGMSRWRIGVRILLPQVMRFA 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +P L++ +   LK+S+L    G  +L+
Sbjct: 159 LPGLSNVWQMSLKDSALVSVTGIVELM 185


>gi|270262831|ref|ZP_06191102.1| transporter [Serratia odorifera 4Rx13]
 gi|270043515|gb|EFA16608.1| transporter [Serratia odorifera 4Rx13]
          Length = 228

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSL-YIALSCYTAAFIAE 283
           T LI G+P LVL+ L  Y L      L +   +G S +  + +S   I L     A+  E
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNNLTEL--LGFSQIDIDPLSAGIITLGFIYGAYFTE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVP+GQ+EAA A G +  +  R +L P  MR  +P + + +  +LK ++L   
Sbjct: 111 TFRGAYMAVPKGQIEAATAYGFSGSQIFRRILFPAMMRFALPGIGNNWQVILKATALVSI 170

Query: 344 VGFADLVS 351
           +G  D+V 
Sbjct: 171 LGLNDVVK 178


>gi|327472725|gb|EGF18152.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 286

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 103 RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 150

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 151 NEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 210

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 211 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 256


>gi|223039434|ref|ZP_03609722.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter rectus RM3267]
 gi|222879230|gb|EEF14323.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter rectus RM3267]
          Length = 217

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  R G  AV + Q+EAA+++ LT  +  R V+LPQA    IP + +  + L+K 
Sbjct: 98  GSYMAESFRLGFEAVKKTQIEAALSVALTQGQILRYVILPQAFSVSIPSIAANVIFLIKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +S+   +   DLV     II     T +A+ ++++ ++ I L +S+++     R+ 
Sbjct: 158 TSVVSIIALPDLVYATKDIIGLYYMTDEALFMLVVSYLIIILPISLVLFWLEKRMR 213


>gi|323350322|ref|ZP_08085987.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123507|gb|EFX95178.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|327459300|gb|EGF05646.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327490517|gb|EGF22298.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 269

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 86  RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 133

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 134 NEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 193

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 194 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 239


>gi|170695614|ref|ZP_02886757.1| ABC-type amino acid transport system permease component-like
           protein [Burkholderia graminis C4D1M]
 gi|170139413|gb|EDT07598.1| ABC-type amino acid transport system permease component-like
           protein [Burkholderia graminis C4D1M]
          Length = 91

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           ++L  AL  Y AA+++E++RSG+ A+PRGQ EAA ALGL +    R V++P
Sbjct: 15  VTLICALIVYQAAYLSEVIRSGIEAIPRGQFEAARALGLGYMTTLRQVIVP 65


>gi|125718666|ref|YP_001035799.1| ABC-type arginine/histidine transport system, permease component,
           putative [Streptococcus sanguinis SK36]
 gi|125498583|gb|ABN45249.1| ABC-type arginine/histidine transport system, permease component,
           putative [Streptococcus sanguinis SK36]
          Length = 268

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 85  RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 132

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 133 NEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 192

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 193 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 238


>gi|104782883|ref|YP_609381.1| arginine/ornithine transport protein AotQ [Pseudomonas entomophila
           L48]
 gi|95111870|emb|CAK16594.1| arginine/ornithine transport protein AotQ (membrane) [Pseudomonas
           entomophila L48]
          Length = 229

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 9/128 (7%)

Query: 228 LIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I G+P LVLI L +    D      P+LG  ++I    ++P    +   L     A+++
Sbjct: 55  VIRGIPDLVLILLIFYGGQDLLNRVAPLLGYDDYI---DLNPLVAGIG-TLGFIFGAYLS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   + +P+GQ EA  A G++  +    +++PQ +R  IP  T+ +L L K ++L  
Sbjct: 111 ETFRGAFLGIPKGQAEAGAAYGMSGVQVFFRIMVPQMIRLAIPGFTNNWLVLTKATALIS 170

Query: 343 AVGFADLV 350
            VG  D++
Sbjct: 171 VVGLQDMM 178



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP L
Sbjct: 3   KGYGAVILDGAWLTLQLALSSMALAIVLGLVGVALRLSPVRWLAWLGDLYSTVIRGIPDL 62

Query: 143 VVIFFLY 149
           V+I  ++
Sbjct: 63  VLILLIF 69


>gi|209549651|ref|YP_002281568.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209535407|gb|ACI55342.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 276

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA+   + P  ++ 
Sbjct: 151 AMTINTAAYQAEILRGAIESVPHGQHEAAAALGIHKFIAFRKIVLPQALIVALRPYGNEI 210

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + L+K S++   +   DL+ 
Sbjct: 211 ILLIKGSAVVAIITVLDLMG 230


>gi|116252667|ref|YP_768505.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257315|emb|CAK08410.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 219

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 41/67 (61%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA    I R+G  A+P GQ EAA+A GLT  +    +L PQAMR  +P L +  + LLK+
Sbjct: 100 AAITCAIFRAGFAALPGGQAEAALAAGLTPLQTIFGILTPQAMRIALPGLGNYAVQLLKD 159

Query: 338 SSLAVAV 344
           +S+  A+
Sbjct: 160 TSVVSAI 166


>gi|254476644|ref|ZP_05090030.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. R11]
 gi|214030887|gb|EEB71722.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. R11]
          Length = 263

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G+THR+A   +L+PQ     +P L++ ++ L+K 
Sbjct: 123 GAFAANVLFGAMRAVPRAQIETAEAYGMTHRQAFWRILVPQMWTYALPGLSNLWMVLIKA 182

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 183 TPLLFLLGVEDIV 195


>gi|209547730|ref|YP_002279647.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533486|gb|ACI53421.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 43/67 (64%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA  + I R+G  ++P+GQ EA++A GLT  +    +L PQAMR  +P L +  + LLK+
Sbjct: 100 AAITSSIFRAGFASLPKGQAEASLAAGLTPLQTIFEILTPQAMRIALPALGNYAVQLLKD 159

Query: 338 SSLAVAV 344
           +S+  A+
Sbjct: 160 TSVVSAI 166


>gi|222086235|ref|YP_002544767.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723683|gb|ACM26839.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 276

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 8/171 (4%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-V 250
           +SF+LG +LS+    L+R    K   +L   Y+  +L  G P L  I + Y   +  P  
Sbjct: 75  YSFILGAILSI-PLALARMSKSKILNSLTYGYV--YLFRGTPLLAQIFIVY---YGFPQA 128

Query: 251 LGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            G  ++IG        F     A++  TAA+ AEIVR  + +V RGQ EAA +LGL    
Sbjct: 129 RGFLDYIGLWWFFRDPFNCGLFAITLNTAAYQAEIVRGAIQSVHRGQSEAAASLGLHKLV 188

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
               V++PQA+   + P  ++ + L+K+S+    +   DL+       +QT
Sbjct: 189 TFYKVIMPQALIVALRPYGNEIILLIKSSATVSIITVYDLMGETRYAFSQT 239


>gi|255263364|ref|ZP_05342706.1| glutamine ABC transporter permease protein [Thalassiobium sp.
           R2A62]
 gi|255105699|gb|EET48373.1| glutamine ABC transporter permease protein [Thalassiobium sp.
           R2A62]
          Length = 277

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 50/84 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A++AEI RSG+ +V + Q  A+ +LGL+ R     V+LPQA+R +IP   + 
Sbjct: 152 LALILTYSAYVAEIFRSGIDSVHKSQRAASESLGLSDRDTMWFVILPQAIRHVIPAQMNM 211

Query: 331 YLNLLKNSSLAVAVGFADLVSVGG 354
           ++ L K+ +L   +G  ++    G
Sbjct: 212 FIALQKDVALLSFIGPVEIFRQAG 235


>gi|218671754|ref|ZP_03521423.1| octopine ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 193

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 11/154 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           + G+ +   Y+  F+  G P LV + L Y    Q       LG + F         +   
Sbjct: 47  EIGRTITRAYV--FVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFF-----REPYWCA 99

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL+  TAA+ +EI R GL+AV   ++EAA A G++     R ++LP A+R  +P   +
Sbjct: 100 VLALTLNTAAYCSEIFRGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGN 159

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           + + ++K ++LA  +   ++  + G +I  + +A
Sbjct: 160 EIILMIKATALASVITIMEVTGLAGKLIADSFRA 193


>gi|325697688|gb|EGD39573.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 269

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 86  RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INDIPASVFA------IVAFAF 133

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 134 NEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 193

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 194 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 239


>gi|324992108|gb|EGC24030.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK405]
 gi|324994202|gb|EGC26116.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK678]
 gi|327459419|gb|EGF05765.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327472827|gb|EGF18254.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 226

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  RSGL AV R Q E  +++GL   +    V+LPQA    +P  ++  + L+K 
Sbjct: 98  GSYMAESFRSGLEAVSRTQREVGLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +S+  AV  ADL+ V   +I    +T  A+ +++I ++ I L +S+  +    RL 
Sbjct: 158 TSVFSAVALADLMFVAKDLIGLYYETDTALLMLVIAYLIILLPISLGFSCIERRLR 213


>gi|295675884|ref|YP_003604408.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295435727|gb|ADG14897.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 237

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 1/171 (0%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+++ T++  G P  V + L Y   +   ++   N +  +          +A +  T A+
Sbjct: 58  LVWLYTYIFRGTPLYVQLLLCYTGLYSLEIIRN-NELTNAFFRDGMNCTLLAFTLNTCAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI    + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++
Sbjct: 117 TTEIFAGAIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTV 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A      D++ +   + + T Q+     I   +YL +S  +     R   +
Sbjct: 177 AFTATVPDILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAERR 227


>gi|85707348|ref|ZP_01038431.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. 217]
 gi|85668156|gb|EAQ23034.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. 217]
          Length = 241

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   SP F+SL I ++   A ++ E  R  L A+P  Q  A  +LGLT  +A R +++PQ
Sbjct: 105 GIHFSP-FVSLLIGITFNNAGYLTENFRGALKAIPDTQGRAGRSLGLTQLQAFRHIIMPQ 163

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSV 352
            +R    P+T+Q +  +  +SL V VG  +DL  V
Sbjct: 164 MLRISFLPMTNQMVWAILMTSLGVTVGMNSDLYGV 198


>gi|167036208|ref|YP_001671439.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862696|gb|ABZ01104.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 221

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 73/133 (54%), Gaps = 8/133 (6%)

Query: 225 STFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYT 277
           +T L+   P L  +   Y +L  + P+L Q  F+       G  +S  F +  I ++   
Sbjct: 41  ATLLVLRTPYLWRLVKAYVELARNTPLLIQLFFVYFALPSLGLKIS-GFSAAIITMTFMG 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E++R+G+ AVPR Q+E+  ++GL+  +  R V+LPQA    +P L + ++ LLK 
Sbjct: 100 GAYLTEVLRAGIEAVPRAQLESGRSIGLSEGQLLRHVVLPQAGILSLPALFANFIFLLKE 159

Query: 338 SSLAVAVGFADLV 350
           +++  AV   +++
Sbjct: 160 TTVVSAVAVPEIL 172


>gi|170721983|ref|YP_001749671.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169759986|gb|ACA73302.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 236

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI+R  L+AV  GQ EAA AL L        V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEILRGSLMAVAPGQYEAARALNLKRSTTFFKVILPQSLLVAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K S++A  V   DL+ V     +++    +I L    +YL +  ++   +  L A
Sbjct: 171 LILMIKASAIASLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHLEA 229

Query: 391 KIA 393
           ++ 
Sbjct: 230 RLG 232


>gi|327467233|gb|EGF12737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
 gi|328945052|gb|EGG39208.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 270

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 217 KALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL       FG+P L+  I  KY   F+       N I  S  +       +A + 
Sbjct: 87  RGTPLLVQLMLTYFGIPLLLKAINQKYGTSFN------INEIPASVFA------IVAFAF 134

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L +  + L 
Sbjct: 135 NEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINSLIGLT 194

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 195 KGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 240


>gi|220925012|ref|YP_002500314.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219949619|gb|ACL60011.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 232

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 18/178 (10%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TFLIFGLPTLVL 237
           L   T   + +  F++G V+   A         K    LPL   +   T L+ G+P L++
Sbjct: 18  LAAGTTLALALCGFLVGAVIGALAA------SAKLSGLLPLRAAADVYTTLLRGVPDLLV 71

Query: 238 IALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           I L Y      L     + G   F+G     P F     AL   + A+ AE+ R   +A+
Sbjct: 72  IYLLYFGGSAALGSVAGLFGASGFVG----LPPFAVGVAALGIISGAYQAEVFRGAYLAL 127

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            RGQ+EAA A+G++     R V+ P   R+ +P L + +  LLK+S+L    G  +L+
Sbjct: 128 DRGQIEAARAVGMSPALLFRRVVTPLVARTALPGLGNVWQILLKDSALVSVTGLVELL 185


>gi|325293913|ref|YP_004279777.1| nopaline ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
 gi|325061766|gb|ADY65457.1| nopaline ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 235

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 2/175 (1%)

Query: 226 TFLIFGLPTLVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           T L+ G+P L++I L +   + F   V   F +   +     F+   IA+     A+  E
Sbjct: 61  TSLVRGVPELLIIYLLFFSSVQFVTQVATAFGYAALADSGYAFIIAIIAIGTIAGAYSTE 120

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  L ++P G +EAA ALG+  R+  R +++PQ +R  IP + + +   +K+++L   
Sbjct: 121 VIRGALASIPTGHIEAARALGIPGRRIFRRIIIPQMLRIAIPGMNNVWQTTIKDTALVSV 180

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG  +L+         T   +   LI   +Y +++I+     +R+   + L+ +K
Sbjct: 181 VGLQELMRAASVGAGSTRNPLIFFLIAAVVYFAITIISQAGFDRVERLVRLRARK 235


>gi|327194765|gb|EGE61607.1| nopaline ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 174

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 4/127 (3%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T +I G+P L++I L Y   F    L      GG      F +   AL+   + + AEI 
Sbjct: 5   TGIIRGVPELLIILLTY---FGGTAL-LSAITGGYIEINAFAAGVAALTVVFSGYAAEIF 60

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + AV  GQ EAA ALGL++ +   L+++PQ +   +P   +  ++L+K++SL   VG
Sbjct: 61  RGAINAVAPGQREAAAALGLSNAQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLISVVG 120

Query: 346 FADLVSV 352
             D++ V
Sbjct: 121 LTDVMRV 127


>gi|303253513|ref|ZP_07339652.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248384|ref|ZP_07530407.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307261838|ref|ZP_07543502.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|302647623|gb|EFL77840.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306855122|gb|EFM87302.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306868455|gb|EFN00268.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 227

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 19/223 (8%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           PT ++   A   + +FVL ++L+   +        K  KA+   Y+  F   G P LV  
Sbjct: 14  PT-SLSLTAVSLLIAFVLAVILTFLLS-----MESKLIKAIVNGYLMLFT--GTPLLV-- 63

Query: 239 ALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             ++ L +  P  GQF +I  S     +S  +    +AL+  +AA+  ++    + A+P+
Sbjct: 64  --QFFLIYHGP--GQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPK 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E   ALGL+ R  T  +L+P A+R  +P  +++ + + K +SLA  +   D++    
Sbjct: 120 GQWETCAALGLS-RLDTLKILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYAR 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +      AI I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 179 QLYGTEYDAITIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|116250817|ref|YP_766655.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255465|emb|CAK06541.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 235

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 6/135 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP   ++ + LS Y   +++E++R   +AV RGQ +AA +LG T  +    V+ PQA+ 
Sbjct: 86  VSPNVAAI-VGLSLYHGGYLSEVLRPAYLAVERGQHDAADSLGYTFLQKILRVVGPQAVH 144

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEIILIWMFIYLSLSI 379
             +P   +  + L+ N +L + +G AD+++    ++ +       E  L+   IY  L +
Sbjct: 145 IALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMERDYNQYQFETYLVLAVIYSLLCL 204

Query: 380 M---IALFMNRLNAK 391
           +   +  F    NAK
Sbjct: 205 LAWIVVRFFETRNAK 219


>gi|86358033|ref|YP_469925.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282135|gb|ABC91198.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 276

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 49/81 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA    + P  ++
Sbjct: 150 LAMTINTAAYQAEILRGAIESVPHGQREAAAALGIHRIIAFRKIILPQAFIVALRPYGNE 209

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + L+K S++   +   DL+ 
Sbjct: 210 IILLIKGSAVVAIITVLDLMG 230


>gi|53728960|ref|ZP_00348280.1| COG4160: ABC-type arginine/histidine transport system, permease
           component [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|126208815|ref|YP_001054040.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae L20]
 gi|190150672|ref|YP_001969197.1| arginine transporter permease ArtM [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307250611|ref|ZP_07532552.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307257418|ref|ZP_07539187.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307264020|ref|ZP_07545620.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097607|gb|ABN74435.1| arginine transport system permease protein ArtM [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|189915803|gb|ACE62055.1| arginine transport system permease protein ArtM [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306857352|gb|EFM89467.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306864070|gb|EFM95984.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306870631|gb|EFN02375.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 227

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 19/223 (8%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           PT ++   A   + +FVL ++L+   +        K  KA+   Y+  F   G P LV  
Sbjct: 14  PT-SLSLTAVSLLIAFVLAVILTFLLS-----MESKLIKAIVNGYLMLFT--GTPLLV-- 63

Query: 239 ALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             ++ L +  P  GQF +I  S     +S  +    +AL+  +AA+  ++    + A+P+
Sbjct: 64  --QFFLIYHGP--GQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPK 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E   ALGL+ R  T  +L+P A+R  +P  +++ + + K +SLA  +   D++    
Sbjct: 120 GQWETCAALGLS-RLDTLKILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYAR 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +      AI I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 179 QLYGTEYDAITIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|187923119|ref|YP_001894761.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714313|gb|ACD15537.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 237

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 1/171 (0%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+++ T++  G P  V + L Y   +   ++                +L +A +  T A+
Sbjct: 58  LVWLYTYVFRGTPLYVQLLLCYTGLYSLEIIRNHELTNAFFRDGMHCTL-LAFTLNTCAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI    + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++
Sbjct: 117 TTEIFAGAIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTV 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A      D++ +   + + T Q+     I   +YL +S  +     R   +
Sbjct: 177 AFTATVPDILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAERR 227


>gi|298717121|ref|YP_003729763.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361310|gb|ADI78091.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 241

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 12/144 (8%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P L +     FG    V+ A+   L F  P    F+  G       F++  IA+   
Sbjct: 69  RGVPELLVIYLFYFG-GRQVVSAVGTALGFQGP----FDVNG-------FVAGAIAIGLI 116

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+ + + R    A+P G +EAA   G+      R +++PQA+R+ +P + +Q+ +++K
Sbjct: 117 SGAYQSGVFRGAFYAIPGGTLEAATVTGMGRLMMFRRIIVPQALRTALPGMGNQWQSVIK 176

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
            S+L    G  + ++   T  N T
Sbjct: 177 ESALVSVTGLVETMNQVSTAANST 200


>gi|296158680|ref|ZP_06841510.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891248|gb|EFG71036.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 224

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 14/159 (8%)

Query: 247 DKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           + P L Q  F+       G T+SP   ++ I L+  + A++ +I+RSG+ +V   ++E A
Sbjct: 66  NTPALVQIFFLFYALPDAGITLSP-MAAVLIGLTLNSGAYLTDILRSGISSVRTSELETA 124

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LG++  +  R V+LP   ++I  PL + ++ L+  SS+    G  +L      I +  
Sbjct: 125 ETLGMSRLQTVRYVILPHVAKTIYAPLCNFFIWLVLGSSIGSIFGVEELTGRAINISSAN 184

Query: 361 GQAIEIILIWMFIYLSL----SIMIAL---FMNRLNAKI 392
            + IE   +   +Y++L    SI +AL   +  R+ A+I
Sbjct: 185 MRTIETFSVVAAMYVALTFVASIALALTGRYAFRVKARI 223


>gi|323525227|ref|YP_004227380.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382229|gb|ADX54320.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 237

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 1/171 (0%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+++ T++  G P  V + L Y   +   ++                +L +A +  T A+
Sbjct: 58  LVWLYTYIFRGTPLYVQLLLCYTGLYSLEIVRNHELTNAFFRDGMHCTL-LAFTLNTCAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI    + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++
Sbjct: 117 TTEIFAGAIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTV 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A      D++ +   + + T Q+     I   +YL +S  +     R   +
Sbjct: 177 AFTATVPDILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAERR 227


>gi|15890314|ref|NP_355986.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158517|gb|AAK88771.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 221

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 9/134 (6%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y  HF    LG F    G  +SP + +L + ++   A ++AE  R  L A+P  Q  +  
Sbjct: 75  YMAHFG---LGNF----GIHLSP-YTALLVGIAFNNAGYLAENFRGALKAIPDTQTRSGR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQT 360
           +LG+T  +  RL+++PQ +R    P T+Q +  +  +SL V VG   DL  V   +  ++
Sbjct: 127 SLGMTSMQTFRLIIMPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGVTQALNARS 186

Query: 361 GQAIEIILIWMFIY 374
            +  E   +   IY
Sbjct: 187 FRTFEFFALAAVIY 200


>gi|241203419|ref|YP_002974515.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857309|gb|ACS54976.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 235

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 6/137 (4%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP   ++ + LS Y   +++E++R   +AV RGQ +AA +LG T  +    V+ PQA+ 
Sbjct: 86  VSPNVAAI-VGLSLYHGGYLSEVLRPAYLAVERGQHDAADSLGYTFLQKILRVVGPQAVH 144

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEIILIWMFIYLSLSI 379
             +P   +  + L+ N +L + +G AD+++    ++ +       E  L+   IY  L +
Sbjct: 145 IALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMERDYNQYQFETYLVLAVIYSLLCL 204

Query: 380 ---MIALFMNRLNAKIA 393
              ++  F    NA+ A
Sbjct: 205 VAWIVVRFFETRNARFA 221


>gi|303250563|ref|ZP_07336760.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307252992|ref|ZP_07534879.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650551|gb|EFL80710.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859521|gb|EFM91547.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 227

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 19/223 (8%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           PT ++   A   + +FVL ++L+   +        K  KA+   Y+  F   G P LV  
Sbjct: 14  PT-SLSLTAVSLLIAFVLAVILTFLLS-----MESKLIKAIVNGYLMLFT--GTPLLV-- 63

Query: 239 ALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             ++ L +  P  GQF +I  S     +S  +    +AL+  +AA+  ++    + A+P+
Sbjct: 64  --QFFLIYHGP--GQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPK 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E   ALGL+ R  T  +L+P A+R  +P  +++ + + K +SLA  +   D++    
Sbjct: 120 GQWETCAALGLS-RLDTLKILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYAR 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +      AI I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 179 QLYGTEYDAITIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|288959824|ref|YP_003450164.1| hypothetical protein AZL_a00890 [Azospirillum sp. B510]
 gi|288912132|dbj|BAI73620.1| hypothetical protein AZL_a00890 [Azospirillum sp. B510]
          Length = 262

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 255 NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           + +GG+  +P   F  +   +  + AA+ AE +R+G+ AVP    EAA +LG    +  R
Sbjct: 111 DALGGAGRNPFGAFFWVVTVVGLHGAAYHAEALRAGIEAVPDTMREAARSLGFGRLEILR 170

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V LP A+R  +P + +  +N++K +++A AV   ++      I  Q    +E++++ + 
Sbjct: 171 WVELPMALRIALPAIFNNLVNIVKLTTVASAVAVGEITYASIMIWTQRDIVVELMIVLLL 230

Query: 373 IYLSLSIMIA 382
            + ++++ ++
Sbjct: 231 FFSAINLALS 240


>gi|322373587|ref|ZP_08048123.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321278629|gb|EFX55698.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 307

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 10/174 (5%)

Query: 231 GLPTLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + L Y     F + + G+F         P  +    A +   AA+++E +R+ 
Sbjct: 127 GTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRAA 186

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + G  +
Sbjct: 187 IQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIVE 246

Query: 349 LVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +    +GG       + I + L    +Y  +SI+I      +   +A+K  +
Sbjct: 247 MYAQAQILGGADYRYFERYISVAL----VYWGISILIENIGRSVENHMAIKAPE 296


>gi|255321555|ref|ZP_05362713.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter showae RM3277]
 gi|255301411|gb|EET80670.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter showae RM3277]
          Length = 217

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  R G  AV + Q+EAA+++ LT  +  R V+LPQA    IP + +  + L+K 
Sbjct: 98  GSYMAESFRLGFEAVKKTQIEAALSVALTQGQILRYVILPQAFSVSIPSIAANVIFLIKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +S+   +   DLV     II     T +A+ ++++ ++ I L +S+++     R+ 
Sbjct: 158 TSVISIIALPDLVYATKDIIGLYYMTDEALFMLVVSYLIIILPISLVLFWLEKRMR 213


>gi|225378343|ref|ZP_03755564.1| hypothetical protein ROSEINA2194_04004 [Roseburia inulinivorans DSM
           16841]
 gi|225209780|gb|EEG92134.1| hypothetical protein ROSEINA2194_04004 [Roseburia inulinivorans DSM
           16841]
          Length = 226

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 24/139 (17%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL    F+ +GLP + +     Q + +   +    F+GGS                   
Sbjct: 71  PLLVQLFFIYYGLPKIGI-----QTNAEACGVAGLAFLGGS------------------- 106

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE  RSGL A+   Q E+A +LG+   +  R ++LPQAM   +P   +  + LLK +S
Sbjct: 107 YMAEAFRSGLEAIEPIQTESAYSLGMNRCQTMRYIILPQAMSISVPAFVANVIFLLKETS 166

Query: 340 LAVAVGFADLVSVGGTIIN 358
           +  A+   DL+     +I 
Sbjct: 167 VFSAISLMDLMFTAKDLIG 185


>gi|126731144|ref|ZP_01746952.1| probable permease protein for ABC transporter system for
           amino-acids [Sagittula stellata E-37]
 gi|126708446|gb|EBA07504.1| probable permease protein for ABC transporter system for
           amino-acids [Sagittula stellata E-37]
          Length = 270

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 18/129 (13%)

Query: 231 GLPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           GLP +++I   Y + F  P LG        +I GS      +SL +  + YTA    E++
Sbjct: 113 GLPVILVI---YLIGFGVPGLGLPRPWNSPYIWGS------LSLILVYAAYTA----EVL 159

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ ++   Q  AA++LGL+     R V+LPQA+R +IP   + ++ L K+ +L   +G
Sbjct: 160 RSGIDSIHESQRAAALSLGLSGGDTMRFVILPQAIRRVIPANMNLFIALQKDVALLSFIG 219

Query: 346 FADLVSVGG 354
             ++    G
Sbjct: 220 PVEIFRQAG 228


>gi|15601991|ref|NP_245063.1| arginine transporter permease subunit ArtM [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|12720339|gb|AAK02210.1| ArtM [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 227

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 11/166 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVR 286
           G P LV    ++ L +  P  GQF ++  S + P     +    + L+  +AA+   +  
Sbjct: 58  GTPLLV----QFFLIYAGP--GQFEWLVDSALWPLLSNAWFCAMLTLALNSAAYSTLLFH 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+ +GQ E+  ALGLT R  T  +L+P A++  +P  +++ + + K ++LA  +  
Sbjct: 112 GAVKAISKGQWESCAALGLT-RMETLKILIPYALKRALPSYSNEIILVFKGTALASTITI 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            D++     +      A+ I  I   IYL ++ +  L + +L +K+
Sbjct: 171 MDIMGYARQLYGTEYDALTIYGIAGMIYLIITAIATLLLRKLESKV 216


>gi|26990306|ref|NP_745731.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148547398|ref|YP_001267500.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24985260|gb|AAN69195.1|AE016554_2 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|148511456|gb|ABQ78316.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|313498468|gb|ADR59834.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 236

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI R  L+AV  GQ EAA AL L        V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEIFRGSLMAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K S++A  V   DL+ V     +++    +I L    +YL +  ++   +  L A
Sbjct: 171 LILMIKASAIASLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHLEA 229

Query: 391 KIA 393
           ++ 
Sbjct: 230 RLG 232


>gi|126653497|ref|ZP_01725590.1| putative amino acid ABC transporter, permease protein [Bacillus sp.
           B14905]
 gi|126589775|gb|EAZ83909.1| putative amino acid ABC transporter, permease protein [Bacillus sp.
           B14905]
          Length = 233

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 58/118 (49%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +I  +  + A + E+ RS L  + +GQ+EAA ++GLT  +A   ++ PQA+   +P + +
Sbjct: 103 FIVFAFSSTAILIEVFRSALSTIEKGQLEAAYSVGLTTFQAYTRIITPQALVVALPNICT 162

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +NL+K +SL  A+   ++        N     +E  L    +YL L   +     R
Sbjct: 163 ATVNLIKATSLGYAMSLPEITLKAKVAANVGYNYVEAYLDIFIVYLILCSTVEYLFKR 220


>gi|255263816|ref|ZP_05343158.1| arginine/histidine-ABC transporter, permease protein [Thalassiobium
           sp. R2A62]
 gi|255106151|gb|EET48825.1| arginine/histidine-ABC transporter, permease protein [Thalassiobium
           sp. R2A62]
          Length = 268

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 10/126 (7%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G+T R+    VL+PQ     +P L++ ++ L+K 
Sbjct: 127 GAFAANVLFGAMRAVPRPQLETAEAYGMTRRQTFWRVLVPQMWIYALPGLSNLWMVLIKA 186

Query: 338 SSLAVAVGFADLV----SVGGTIINQ-TGQAIEIILIWMFI-----YLSLSIMIALFMNR 387
           + L   +G  D+V     +GG    + T    +  L+W F+     YL  + +  + M+R
Sbjct: 187 TPLLFLLGVEDIVYWARELGGAKTARFTDYPHQNWLMWYFLALLVFYLCFTRLSEIVMDR 246

Query: 388 LNAKIA 393
           L  +++
Sbjct: 247 LTIRLS 252


>gi|119386412|ref|YP_917467.1| binding-protein-dependent transport systems inner membrane
           component [Paracoccus denitrificans PD1222]
 gi|119377007|gb|ABL71771.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 293

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 46/80 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +    AF A ++   + AVPR Q+E A A G++ R+ +R VL+PQ     +P L + 
Sbjct: 146 IAFAVVFGAFAANVLYGAMNAVPRAQLETAEAYGMSPRQVSRRVLIPQMWTYALPGLANL 205

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           ++ L+K + L   +G  D+V
Sbjct: 206 WMILIKATPLLFVLGVEDIV 225


>gi|240850317|ref|YP_002971710.1| amino acid ABC transporter, permease protein [Bartonella grahamii
           as4aup]
 gi|240267440|gb|ACS51028.1| amino acid ABC transporter, permease protein [Bartonella grahamii
           as4aup]
          Length = 235

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 51/84 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +EI +   ++V  GQ EA+ ALGL++      V+LPQAM   + PL ++ + ++K
Sbjct: 116 SAAYQSEIFKGSFLSVTTGQREASKALGLSNSVTFFRVILPQAMIVALRPLGNELILMIK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +S+LA  +   DL+ V     ++T
Sbjct: 176 SSALASLITVYDLMGVAKLTYSRT 199


>gi|104781753|ref|YP_608251.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95110740|emb|CAK15453.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 236

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI R+ L+AV  GQ EAA AL L        V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEIFRASLMAVAPGQYEAARALNLKRSTTFFKVVLPQSLLVAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
            + ++K S++A  V   DL+ V
Sbjct: 171 LIMMIKASAIASLVTIYDLMGV 192


>gi|224438000|ref|ZP_03658939.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG
           18818]
 gi|313144446|ref|ZP_07806639.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG
           18818]
 gi|313129477|gb|EFR47094.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG
           18818]
          Length = 219

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 72/132 (54%), Gaps = 4/132 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E++     L+     ++ E  R+GL ++ + Q+E+A ++GL+  +  R V+LPQ++   +
Sbjct: 87  EYVCAITGLAFLGGGYMCESFRTGLESMSKSQIESAQSIGLSSFQMMRYVILPQSLGVAL 146

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQA-IEIILIWMFIYLSLSIM 380
           P + +  + LLK +S+   +  AD++ V   II    +T +A + +IL ++ + L LS +
Sbjct: 147 PSIGANVIFLLKETSVVGVIALADVMFVTKDIITNYYKTNEALLMLILSYLVVLLPLSFV 206

Query: 381 IALFMNRLNAKI 392
            +L       ++
Sbjct: 207 FSLLEKSYKKRV 218


>gi|218677735|ref|ZP_03525632.1| putative transmembrane component of ABC transporter [Rhizobium etli
           CIAT 894]
          Length = 98

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 47/76 (61%)

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+ PQA+R I PPL++ +++++K+SSL   +G AD+  +G      + +  E   I  
Sbjct: 15  RSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYAAGSFRFFETYSIVT 74

Query: 372 FIYLSLSIMIALFMNR 387
           +IYL L+I ++L + R
Sbjct: 75  YIYLILTIGLSLALRR 90


>gi|313113063|ref|ZP_07798698.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624614|gb|EFQ07934.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 214

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 48/80 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   A + +EI R G+ AVP+GQ EA   LG+T  +    V L Q ++ I+ P+ ++
Sbjct: 91  VAFAINYACYFSEIYRGGIEAVPKGQTEAGQVLGMTKTQIFFKVTLLQVVKRILAPMGNE 150

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            + L+K++SLA  +   +++
Sbjct: 151 VITLVKDTSLANTIANKEII 170


>gi|308234954|ref|ZP_07665691.1| Putative Glutamate transport ATP-binding protein gluA [Gardnerella
           vaginalis ATCC 14018]
 gi|311114261|ref|YP_003985482.1| ABC transporter permease [Gardnerella vaginalis ATCC 14019]
 gi|310945755|gb|ADP38459.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Gardnerella vaginalis ATCC 14019]
          Length = 297

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 25/184 (13%)

Query: 176 LSFPTLTMDT--NAKIFVFSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTF-- 227
           LS P++      N ++ VF+ +    LG ++++  T +S           PL  I+ F  
Sbjct: 79  LSLPSVLQGLMLNLQVLVFAVIGVAILGTLIAVIRTSVSPML-------FPLRAIAQFYT 131

Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G+P LV++   Y + F  P L  F  I      P  +   IA+    +A++ E++R
Sbjct: 132 TIMRGIPMLVVL---YLIGFGIPGLQLFGRI------PPAILGTIAIVMSYSAYVGEVLR 182

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G   V      +A +LGLT  +  RLV++P  +R + P L + ++++ K++ L   +G 
Sbjct: 183 AGFEDVHPSMRASARSLGLTSGQTVRLVVIPLGLRKVAPALMNDFISMQKDAGLISVLGA 242

Query: 347 ADLV 350
            D V
Sbjct: 243 VDAV 246


>gi|222081073|ref|YP_002540436.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725752|gb|ACM28841.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 221

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 49/85 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            ++S+  A+S   A ++AEI R G+ A+PR Q  AA +LG+T  ++   V+ PQ  + I 
Sbjct: 90  SYISVLAAISFNNAGYLAEIFRGGIAAIPRQQFSAARSLGMTSFQSFMHVVFPQVFQVIF 149

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADL 349
               +Q +  + N+SL + VG  +L
Sbjct: 150 LAFVTQGIWGMLNTSLGMLVGLREL 174


>gi|161619872|ref|YP_001593759.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|161336683|gb|ABX62988.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
          Length = 281

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 124 IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 172

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +   +
Sbjct: 173 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVE 232

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 233 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 280


>gi|307255255|ref|ZP_07537070.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259690|ref|ZP_07541413.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861804|gb|EFM93783.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866230|gb|EFM98095.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 227

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 11/171 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVR 286
           G P LV    ++ L +  P  GQF +I  S     +S  +    +AL+  +AA+  ++  
Sbjct: 58  GTPLLV----QFFLIYHGP--GQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFH 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ E   ALGL+ R  T  +L+P A+R  +P  +++ + + K +SLA  +  
Sbjct: 112 GAVKAIPKGQWETCAALGLS-RLDTLKILIPYALRRALPSYSNEIILVFKGTSLASTITL 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++     +      AI I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 171 LDIMGYARQLYGTEYDAITIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|225628152|ref|ZP_03786187.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225616977|gb|EEH14024.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
          Length = 281

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 124 IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 172

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +   +
Sbjct: 173 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVE 232

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 233 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 280


>gi|154173667|ref|YP_001408466.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           curvus 525.92]
 gi|112802706|gb|EAU00050.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter curvus 525.92]
          Length = 222

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 50/90 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + +IVR  + ++P+ Q E+A +LGL+  +    V++P A R ++P   + 
Sbjct: 95  IVFSLWGVFEMMDIVRGAIASIPKHQFESAASLGLSKMQIYAYVIIPLATRRLVPGAVNL 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
              ++K +S+ V +G  ++V VG  II + 
Sbjct: 155 LSRMIKTTSIVVLIGVIEVVKVGQQIIERN 184


>gi|82544788|ref|YP_408735.1| histidine transport, membrane protein M [Shigella boydii Sb227]
 gi|81246199|gb|ABB66907.1| histidine transport, membrane protein M [Shigella boydii Sb227]
 gi|320183763|gb|EFW58597.1| Histidine ABC transporter, permease protein HisM [Shigella flexneri
           CDC 796-83]
 gi|332093400|gb|EGI98458.1| histidine transport system permease protein hisM [Shigella boydii
           3594-74]
          Length = 238

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +V  G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALTLNTCAYTTEIFAGAIRSVLHGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
            + +L +++LA      DL+ +   I   T Q      I   +YL +S ++I+LF
Sbjct: 167 VILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLF 221


>gi|309973358|gb|ADO96559.1| Arginine ABC transporter, permease protein ArtM [Haemophilus
           influenzae R2846]
          Length = 227

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 90/180 (50%), Gaps = 13/180 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV----SPEFMSLYIALSCYT 277
           LY++ F   G P LV    ++ L +  P  GQF +I  S +    S  +    +AL+  +
Sbjct: 51  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWIIDSPLWFFLSNAWFCATLALALNS 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  ++    + A+ +GQ E+  ALGL+ R  T  +L+P A++  +P  +++ + + K 
Sbjct: 103 AAYSTQLFHGAVKAIHKGQWESCAALGLS-RLQTLKILIPYALKRALPSYSNEIILVFKG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 162 TALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLAFER 221


>gi|218508269|ref|ZP_03506147.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 180

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL     AF AE  R+ + AVPR Q++A IALGL   +    ++ P A R+ IP L + 
Sbjct: 94  MALGLNLMAFNAEAYRASIQAVPREQLDAGIALGLNPLQRVLYIVFPTAFRASIPVLLTN 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI 356
            + + + S+L   V   DL+  G T+
Sbjct: 154 GIVIFQQSALVAIVAIQDLMYQGKTL 179


>gi|213860046|ref|ZP_03385750.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 105

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R
Sbjct: 20  VSP-FLCGVIALSLLYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWR 78

Query: 322 SIIPPLTSQYLNLLK 336
             +P L +Q+L LLK
Sbjct: 79  HALPGLGNQWLVLLK 93


>gi|260567564|ref|ZP_05838034.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|260157082|gb|EEW92162.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
          Length = 314

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 157 IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 205

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +   +
Sbjct: 206 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVE 265

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 266 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 313


>gi|126740697|ref|ZP_01756383.1| ABC transporter, permease protein, HisMQ family [Roseobacter sp.
           SK209-2-6]
 gi|126718212|gb|EBA14928.1| ABC transporter, permease protein, HisMQ family [Roseobacter sp.
           SK209-2-6]
          Length = 263

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 44/73 (60%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G+THR+A   +L+PQ     +P L++ ++ L+K 
Sbjct: 123 GAFAANVLFGAMNAVPRAQIETAEAYGMTHRQAFWRILVPQMWTFALPGLSNLWMVLIKA 182

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 183 TPLLFLLGVEDIV 195


>gi|294851192|ref|ZP_06791865.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|294819781|gb|EFG36780.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 314

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 157 IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 205

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +   +
Sbjct: 206 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVE 265

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 266 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 313


>gi|239834534|ref|ZP_04682862.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822597|gb|EEQ94166.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 220

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 64/122 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ Y + + AEI R+G +AVP GQ+EAA A+G++     R +LLP  + S +P L + 
Sbjct: 91  VGLTVYGSPYFAEIFRAGFLAVPAGQLEAARAIGMSEPTIVRRILLPLGLVSALPALVNF 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K + +   +   +L+     +  +T + +E  L+    + +L   I+     L A
Sbjct: 151 SIILTKETVILSIITVPELMYSVQRMSTETFRYLEANLVLALFFWALVETISRAGRWLEA 210

Query: 391 KI 392
           +I
Sbjct: 211 RI 212


>gi|206577721|ref|YP_002238971.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935885|ref|YP_003439944.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290512971|ref|ZP_06552335.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|206566779|gb|ACI08555.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288890594|gb|ADC58912.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289774584|gb|EFD82588.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 239

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 81/154 (52%), Gaps = 18/154 (11%)

Query: 204 ATRLSRHFHEKT-GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG---- 258
           A +LSRH   +  G A  +++       G+P L++I   Y  +F     G  +++G    
Sbjct: 43  AAKLSRHAPARWFGAAWSVVF------RGIPELLVI---YLFYFGGS--GMISWVGRLFG 91

Query: 259 --GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
             G    P F+   +A+   ++++ AE+ R+  +A+  G++EAA A+G+   +  + +LL
Sbjct: 92  ADGFIEVPPFLIGALAIGLISSSYQAEVYRAARLALMPGEVEAATAIGMPRWRILQRILL 151

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           PQ +R  +P L++ +   LK+S+L    G  +L+
Sbjct: 152 PQIIRYSLPGLSNVWQMSLKDSALVSVTGIVELM 185


>gi|163739645|ref|ZP_02147054.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
 gi|163741366|ref|ZP_02148757.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161385100|gb|EDQ09478.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161387104|gb|EDQ11464.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
          Length = 268

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 19/199 (9%)

Query: 214 KTGKALPLLYISTFLIF---GLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSL 269
           K   + PL   + + IF   G P  +     Y L    K V   FN      +S  +M  
Sbjct: 65  KNSTSTPLRKAAEWFIFIFRGSPLFIQFFFAYFLFLQLKSVSPIFN-----PLSAAWMGA 119

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I L   TAA+ AEI    L ++P+G +EAA A GL+     R ++ P  MR   P  T+
Sbjct: 120 LIVLILNTAAYSAEIFYGALRSIPKGDIEAADAYGLSGWPRFRRIMWPTMMRLAWPSYTN 179

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI--------ILIWMFIYLSLSI-- 379
           + + L   ++L    GF      G  +   +  A +         IL + FI L+L +  
Sbjct: 180 EAIFLFHATTLVFFSGFPAWQQRGDALYYASYFADKTFNPFVPYPILAFYFILLTLVVIG 239

Query: 380 MIALFMNRLNAKIALKEKK 398
           +  +   RLNA +  ++++
Sbjct: 240 IFGIINTRLNAHLPQEKRR 258


>gi|325278185|ref|ZP_08143684.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324096679|gb|EGB95026.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 236

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI R  L+AV  GQ EAA AL L        V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEIFRGSLMAVAPGQYEAARALNLKRSTTFFKVILPQSLLVAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K S++A  V   DL+ V     +++    +I L    +YL +  ++   +  L A
Sbjct: 171 LILMIKASAIASLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVEVVRRLLKHLEA 229

Query: 391 KIA 393
           ++ 
Sbjct: 230 RLG 232


>gi|261758895|ref|ZP_06002604.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|261738879|gb|EEY26875.1| polar amino acid ABC transporter [Brucella sp. F5/99]
          Length = 314

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 157 IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 205

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +   +
Sbjct: 206 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVE 265

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 266 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 313


>gi|148559776|ref|YP_001259773.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|256370355|ref|YP_003107866.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|148371033|gb|ABQ61012.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
 gi|256000518|gb|ACU48917.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
          Length = 281

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 124 IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 172

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +   +
Sbjct: 173 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVE 232

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 233 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 280


>gi|325689402|gb|EGD31407.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 229

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  RSGL AV R Q E  +++GL   +    V+LPQA    +P  ++  + L+K 
Sbjct: 101 GSYMAESFRSGLEAVSRTQREVGLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKE 160

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +S+  AV  ADL+ V   +I    +T  A+ +++I ++ I L +S+  +    RL 
Sbjct: 161 TSVFSAVALADLMFVAKDLIGLYYETDTALLMLVIAYLIILLPISLGFSWIERRLR 216


>gi|330831198|ref|YP_004394150.1| ABC-type arginine transporter, permease [Aeromonas veronii B565]
 gi|328806334|gb|AEB51533.1| ABC-type arginine transporter, permease protein [Aeromonas veronii
           B565]
          Length = 220

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 11/165 (6%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIAL 273
           A  L+ +   L  G P L+ I L Y      P  GQF ++  S + P     +    +AL
Sbjct: 44  ATQLVQLWVLLFTGTPLLIQIFLIYY----GP--GQFEWLKASPLWPLLKQPWFCAVLAL 97

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              TAA+   + +  L A+P G++EA  ALG   R+ T  + +  A R ++P  +++ + 
Sbjct: 98  GLNTAAYSTRLFKGALDAIPAGEVEACRALGFNGRQ-TLWMKVRHAARHLVPAYSNEVIL 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +LK SSLA  +   D++ +   +  QT   + +  +   +YL+++
Sbjct: 157 VLKGSSLASTITIMDIMGLAQGLNAQTYDTLAVFGVAGGLYLAMN 201


>gi|118592147|ref|ZP_01549540.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
 gi|118435119|gb|EAV41767.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
          Length = 222

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +ALS + + F  E  R+GL +V +     + +LGL   +   LV+LP A RS +P
Sbjct: 89  FWSGVVALSIWASVFHIESFRAGLSSVSKDIHNTSASLGLRRWQHALLVVLPIAARSALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  ++ +KNS+   A+G  +L  V    I    +A E+ L    IYL + + ++   
Sbjct: 149 STLNTVVSTIKNSAYLQAIGLVELTFVAVDRIAYEFRATEMFLSICVIYLVIVLAVSGLG 208

Query: 386 NRLNAKI 392
           +RL  ++
Sbjct: 209 HRLERRL 215


>gi|296877049|ref|ZP_06901090.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431910|gb|EFH17716.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 266

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 67/123 (54%), Gaps = 4/123 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+ +E +R+ +++V  G++EAA +LG+T+R+    +++P A     P L + 
Sbjct: 128 VALAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNRQVYHRIIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K +SLA +      FA    +GG+ +    + I + +++  + + + I+      
Sbjct: 188 LIGLTKGTSLAFSASVVEIFAQARIIGGSDLKYFERFITVSIVYWIVNILIEILGRHIER 247

Query: 387 RLN 389
           RL+
Sbjct: 248 RLD 250


>gi|324991996|gb|EGC23918.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
          Length = 286

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 61/111 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L + 
Sbjct: 146 VAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINS 205

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + L K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 206 LIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 256


>gi|241554228|ref|YP_002979441.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863534|gb|ACS61196.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 213

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 63/120 (52%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  + LS  TAA+ AE +R G  +VP G +E+A  +G++  +  R +  P A+R  
Sbjct: 80  PSIVAAIVGLSLCTAAYQAENLRGGFASVPMGLVESAEMVGMSPVQIFRRIKAPIALRLT 139

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++ + +LK SSL   VG  +L  +   +   T   +EI      IY  ++ ++AL
Sbjct: 140 FPALVNEAILILKASSLVSVVGVIELTRMAQDLAGSTFLPLEIFASAGLIYFIINWIVAL 199


>gi|327462432|gb|EGF08757.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 286

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 61/111 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P A     P L + 
Sbjct: 146 VAFAFNEAAYASETIRAAILSVDLGEIEAARSLGMTNKQVYMRVIIPNAAVVATPSLINS 205

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + L K +SLA + G  ++ +    I     +  E  +    IY +++I+I
Sbjct: 206 LIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAVNILI 256


>gi|89514218|gb|ABD74969.1| putative ABC transporter permease component [Sinorhizobium
           kostiense]
          Length = 151

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +    L+   AA++ E++R GL  VP G +EAA A+G+T  +A   V  P A+RSI+ 
Sbjct: 14  FRTAVFVLTINNAAYLGEMIRGGLKMVPPGLLEAAAAVGMTKTRAYFRVHAPLALRSILG 73

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            L S+ + ++K S++   +   DL+  G T++ +
Sbjct: 74  NLGSETIAVVKASAITSVITVRDLMG-GPTVVGK 106


>gi|307728985|ref|YP_003906209.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583520|gb|ADN56918.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 237

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 59/121 (48%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A P G++EAA A G++     R V+LP A+R  +P  +++
Sbjct: 107 LAFTLNTCAYTTEIFAGAIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  +++A      D++ +   + + T Q+     I   +YL +S  +     R   
Sbjct: 167 VILMLHATTVAFTATVPDILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAER 226

Query: 391 K 391
           +
Sbjct: 227 R 227


>gi|238921541|ref|YP_002935056.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Edwardsiella ictaluri 93-146]
 gi|238871110|gb|ACR70821.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Edwardsiella ictaluri 93-146]
          Length = 129

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 69/128 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +++ ++L    AAF++E+ R  L AV R ++ AA ++GL   +    +  PQ +R   P 
Sbjct: 2   IAINLSLGLIAAAFLSEVFRGALNAVDRTELLAAKSMGLGRLQIFFNIEAPQMIRFSFPG 61

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + +++  +LKNS+ A  +G ++++     + + T   + + +I  F+Y  +  +I   M 
Sbjct: 62  VVNEFSTVLKNSAFAYTIGISEIMRQAMALTSTTNLGVLVYVIVGFLYFCIYKVILFLMG 121

Query: 387 RLNAKIAL 394
            +  +IA+
Sbjct: 122 LVEHRIAI 129


>gi|319408409|emb|CBI82064.1| ABC transporter, permease protein [Bartonella schoenbuchensis R1]
          Length = 237

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 12/173 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYI 271
           K  K +  L+ S F   GLP L+ + L Y       +   FN+    T      F +  +
Sbjct: 53  KIFKVIATLFSSVFR--GLPELLTLFLVYH-GLQNLIQAIFNYFYIETTFSINAFTAGVL 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS   AAF  E+         +GQ EAA ALG +       ++ PQ  R+ +P L++ +
Sbjct: 110 ALSMVFAAFSCEVWLGAFKIFDKGQYEAAKALGFSCFTTFFRIVFPQLTRNALPGLSNTW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           L LLK++SL   +   DL       + QT  A+      MF Y    ++  LF
Sbjct: 170 LTLLKDTSLVSTISLVDL-------MRQTNLAVAATNKPMFFYFVACLLYLLF 215


>gi|161525298|ref|YP_001580310.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189349964|ref|YP_001945592.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221201396|ref|ZP_03574435.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|221208877|ref|ZP_03581875.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221214042|ref|ZP_03587015.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|160342727|gb|ABX15813.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189333986|dbj|BAG43056.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221166219|gb|EED98692.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|221171333|gb|EEE03782.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221178664|gb|EEE11072.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|325524871|gb|EGD02818.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Burkholderia sp. TJI49]
          Length = 237

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G+T     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMTPFTMYRRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223


>gi|251788879|ref|YP_003003600.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537500|gb|ACT06121.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 240

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 51/87 (58%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F+   +A+   +A++  E+ R+  +AV  G++EAA A+G+   +    +LLPQ MR  
Sbjct: 99  PPFLIGALAIGLISASYQGEVYRAARLAVNHGELEAARAMGMPRWRIGVRILLPQVMRFA 158

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +P L++ +   LK+S+L    G  +L+
Sbjct: 159 LPGLSNVWQMSLKDSALVSVTGIIELM 185


>gi|145592264|ref|YP_001154266.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum arsenaticum DSM 13514]
 gi|145284032|gb|ABP51614.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum arsenaticum DSM 13514]
          Length = 199

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + P F +  IAL   +AA+ AEI RS + A+P  Q   A A      +  R ++LPQ
Sbjct: 84  GINIDP-FTAGVIALGLNSAAYQAEIFRSAVQAIPVEQYLTAEAYAFGKTQTFRYIILPQ 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           A+R  +P L ++ + L+K+SSL   +G
Sbjct: 143 ALRIALPALMNEMVLLIKDSSLVSVIG 169


>gi|319404358|emb|CBI77958.1| ABC transporter, permease protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 235

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ AEI R  L+AV   Q EA+ ALGL        ++ PQAM   + PL ++++ + K
Sbjct: 116 SAAYQAEIFRGSLLAVAAEQREASKALGLNRSTTFFKIIFPQAMVVALRPLGNEFILMTK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +S++A  V   DL+     I ++T
Sbjct: 176 SSAIASLVTVYDLMGTTKLIYSRT 199


>gi|291542412|emb|CBL15522.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus bromii L2-63]
          Length = 216

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 46/73 (63%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +EI R G+ +VP+GQ EA   LG+T  +    ++L Q ++ I  P+ ++ + L+K+
Sbjct: 99  AAYFSEIFRGGIESVPKGQYEAGQVLGMTKGQIFFKIVLLQVVKKITAPMGNEIITLVKD 158

Query: 338 SSLAVAVGFADLV 350
           +SL+  +   +++
Sbjct: 159 TSLSSVIAIPEIL 171


>gi|322412435|gb|EFY03343.1| Amino acid ABC transporter permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 267

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 8/131 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ +++V  G++EAA +LG+   +  R V++P A    IP L +  
Sbjct: 130 AFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMNSVQVYRRVIIPNAAVVAIPTLINGL 189

Query: 332 LNLLKNSSLAVAVGFADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA +    +L +    +GG+      + I + L    +Y S+SI+I      
Sbjct: 190 IGLTKGTSLAFSASIVELFAQAQILGGSDYRYFERYISVAL----VYWSISILIEQVGRL 245

Query: 388 LNAKIALKEKK 398
           +  ++A+K  +
Sbjct: 246 IENRMAIKAPE 256


>gi|149203651|ref|ZP_01880620.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. TM1035]
 gi|149142768|gb|EDM30810.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. TM1035]
          Length = 221

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G   SP F+S+ I ++   A ++ E  R  L A+P  Q  A  +LGLT  ++ R ++LPQ
Sbjct: 85  GIHFSP-FVSILIGITFNNAGYLTENFRGALKAIPDTQGRAGRSLGLTQLQSFRYIILPQ 143

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSV 352
            +R    P+T+Q +  +  +SL V VG  +DL  V
Sbjct: 144 MLRISFLPMTNQMVWAILMTSLGVTVGMNSDLYGV 178


>gi|115351109|ref|YP_772948.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|172060113|ref|YP_001807765.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115281097|gb|ABI86614.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|171992630|gb|ACB63549.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 237

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G+T     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMTPFTMYRRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223


>gi|170703223|ref|ZP_02894027.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170131873|gb|EDT00397.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 237

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G+T     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMTPFTMYRRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223


>gi|109947013|ref|YP_664241.1| polar amino acid transport system permease protein [Helicobacter
           acinonychis str. Sheeba]
 gi|109714234|emb|CAJ99242.1| polar amino acid transport system permease protein [Helicobacter
           acinonychis str. Sheeba]
          Length = 223

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 52/88 (59%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +  S + +A + ++ R  L +V + Q+E+A+ALG+  ++    ++ PQ+  S++P + + 
Sbjct: 92  VVFSLWGSAEMMDLTRGVLTSVSKHQVESALALGMDSKRVIFNIIFPQSFLSLLPSILNL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +  ++K ++L   +G  DL+ VG  II 
Sbjct: 152 FTRMIKTTALVSLIGAIDLLKVGQQIIE 179



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  +A S  I + I G L+G+     ++ + +ICRVY+E  R IP L  +F +
Sbjct: 13  LLEGFEITLLIALSSAIVSIIFGVLLGSLMAFGSQFLIFICRVYLESIRIIPLLAWLFIV 72

Query: 149 Y 149
           Y
Sbjct: 73  Y 73


>gi|330833721|ref|YP_004402546.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|329307944|gb|AEB82360.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 173

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 66/127 (51%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+++E +R+ + AV  G++EAA +LG+T  +  R +++P A     P L +  
Sbjct: 36  AFAFNEAAYMSESIRAAIQAVSPGEIEAARSLGMTSGQVYRRIIIPNAAVIATPSLINTL 95

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L K +SLA + G  ++ +          +  E  +    +Y +LS++I  F   L  K
Sbjct: 96  IGLTKGTSLAFSAGIVEVYAQAQIQGGADYRYFERYISVSLVYWALSVLIESFGRFLENK 155

Query: 392 IALKEKK 398
           +A++  +
Sbjct: 156 MAIQAPE 162


>gi|17986397|ref|NP_539031.1| asparagine transport system permease protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|265991981|ref|ZP_06104538.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17981989|gb|AAL51295.1| asparagine transport system permease protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|263003047|gb|EEZ15340.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 244

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 87  IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 135

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++    +K ++L   +   +
Sbjct: 136 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVITVVE 195

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 196 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 243


>gi|296272603|ref|YP_003655234.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096777|gb|ADG92727.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 226

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 4/130 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA+     A+  EI+R+G+ A  +GQ EA   +GL   +    ++LPQA   I P L SQ
Sbjct: 95  IAMVVNLGAYSTEIIRAGVEATGKGQWEAGKTMGLKWSQIFIHIILPQAFHKISPALVSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++  SS+   +   +L      I ++T  + E   I   IYL  +I++   +  ++ 
Sbjct: 155 CVIVMLGSSVLSQISVEELTFSANFIQSRTFLSFESYFIVTAIYLVFAIILRFILTLISE 214

Query: 391 KI----ALKE 396
           K+    A+KE
Sbjct: 215 KLFKTNAVKE 224


>gi|254470837|ref|ZP_05084240.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
 gi|211959979|gb|EEA95176.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
          Length = 222

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 16/173 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I VFS ++GI L++    ++R         L  ++I   +    P L+ I L Y   F 
Sbjct: 27  QIAVFSMLIGITLAVLLA-VARRNEGSIASRLASVWIE--VARNTPCLLQIYLAY---FG 80

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              LG  N          + ++  A++   A ++AEI+R G  +VP+ Q  AA +LG+  
Sbjct: 81  LGALG-INI-------SSYAAVLGAIAFNNAGYLAEILRGGFNSVPQTQYAAARSLGMNS 132

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +    V+LPQ  R    P+ +Q +  L N+SL + +G  +L   G T   Q+
Sbjct: 133 FRVYSYVVLPQVFRVTFRPIMNQSMWALLNTSLGMVIGLKEL--TGATQFAQS 183


>gi|163843976|ref|YP_001628380.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163674699|gb|ABY38810.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 232

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 75  IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +   +
Sbjct: 124 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVE 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 184 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 231


>gi|167033327|ref|YP_001668558.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166859815|gb|ABY98222.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 236

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 48/82 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI R  L+AV  GQ EAA AL L        V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEIFRGSLMAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSV 352
            + ++K S++A  V   DL+ V
Sbjct: 171 LILMIKASAIASLVTIYDLMGV 192


>gi|254503194|ref|ZP_05115345.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222439265|gb|EEE45944.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 220

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS   A ++AE  R G  AVP  Q+ AA +LG++  +    +++PQ  R +  PLT+Q 
Sbjct: 97  GLSFNCAGYLAENFRGGFQAVPDTQLRAARSLGMSAWQTYTRIIIPQVFRIVYHPLTNQL 156

Query: 332 LNLLKNSSLAVAVGFADL 349
           +  +  SSL + VGF +L
Sbjct: 157 VWAVLMSSLGMLVGFREL 174


>gi|257063102|ref|YP_003142774.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
 gi|256790755|gb|ACV21425.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
          Length = 235

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 4/124 (3%)

Query: 231 GLP---TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           G+P    LV++ L Y   FD         I    VSP F    +A++     +++E VR 
Sbjct: 64  GIPVMVALVILNLLYLTQFDNVAAALGWNITVRDVSP-FWVAAVAVTLTATVYVSEAVRG 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +++V   Q EAA ++GLT  +  R +++PQ +   IP L +  +  +K++S+ + VG  
Sbjct: 123 SVLSVDTTQYEAAYSVGLTKWQTIRRIVIPQFIPVFIPMLCTNIIGTMKSTSIVMTVGVM 182

Query: 348 DLVS 351
           +L++
Sbjct: 183 ELLN 186


>gi|121608890|ref|YP_996697.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553530|gb|ABM57679.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 228

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 56/101 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++ E  R+ ++AVP GQ EA ++ G++  +    + LPQ +R  +P  ++ ++ L+K+
Sbjct: 105 GAYMTETFRAAIMAVPSGQAEAGLSFGMSPLRVFWRITLPQMVRFALPSFSNNWMVLIKS 164

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           ++L   +G  DL+       + T  +    L+   +YL+++
Sbjct: 165 TALVSVIGLNDLMHRAAMAKSATRDSFGAYLVVCVVYLAIT 205


>gi|315652803|ref|ZP_07905777.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315485005|gb|EFU75413.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 223

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 51/88 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +  A + ++VR  +I++P+ Q E+  ALGL+ R+    +++PQ ++ ++P   + 
Sbjct: 97  IVFSLWGTAEMGDLVRGAIISIPKHQYESGEALGLSKRQIFIYIIIPQTIKRLVPLSINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              ++K +SL + +G  +++ V   II 
Sbjct: 157 ITRMIKTTSLVLIIGVVEVIKVAQQIIE 184


>gi|238784128|ref|ZP_04628142.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
 gi|238714974|gb|EEQ06972.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
          Length = 190

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 11/134 (8%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++I G P L  +AL Y   F  P +G    +  + V    +SL I    Y++A+  EI R
Sbjct: 33  WIIRGTPYLAQLALFY---FGLPAIG----VTLTAVEATVLSLAI----YSSAYFGEIFR 81

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +   ++ +GQ+EAA    ++  K+   +  PQA+R  +P L +Q++  +K S++A  +  
Sbjct: 82  TAWKSIGQGQLEAAQVHDISAWKSFWHIQTPQALRFSLPLLGNQFILTIKESAVASIITV 141

Query: 347 ADLVSVGGTIINQT 360
            +L    G I+  T
Sbjct: 142 PELTMTTGQIVANT 155


>gi|123441156|ref|YP_001005144.1| ABC transporter, inner-membrane component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088117|emb|CAL10905.1| ABC transporter, inner-membrane component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 212

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +LI G P L  +A+ Y   F  P +G    +  S V    +SL I    Y++A+  EI R
Sbjct: 55  WLIRGTPYLAQLAVFY---FGLPAIG----VTLSAVEATVISLAI----YSSAYFGEIFR 103

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +   ++  GQ+EAA    ++  K+   +  PQA+R  +P L +Q++  +K S++A  +  
Sbjct: 104 TAWKSIGHGQLEAAQVHDISAWKSFWHIQTPQALRFSLPLLGNQFILTIKESAVASIITV 163

Query: 347 ADLVSVGGTIINQT 360
            +L    G I+  T
Sbjct: 164 PELTMTTGQIVANT 177


>gi|238761694|ref|ZP_04622669.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
 gi|238700208|gb|EEP92950.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
          Length = 205

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +LI G P L  +A+ Y   F  P +G    +  S V    +SL I    Y++A+  EI R
Sbjct: 48  WLIRGTPYLAQLAVFY---FGLPAIG----VTLSAVEATVISLAI----YSSAYFGEIFR 96

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +   ++  GQ+EAA    ++  K+   +  PQA+R  +P L +Q++  +K S++A  +  
Sbjct: 97  TAWKSIGHGQLEAAQVHDISAWKSFWYIQTPQALRFSLPLLGNQFILTIKESAVASIITV 156

Query: 347 ADLVSVGGTIINQT 360
            +L    G I+  T
Sbjct: 157 PELTMTTGQIVANT 170


>gi|167842409|ref|ZP_02469093.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Burkholderia thailandensis
           MSMB43]
          Length = 255

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS   +A++A I+R  +  VP  ++EA  A G+T  +  R ++ P+A R  +P LT +
Sbjct: 106 VALSVNESAYVATILRGAIAGVPAEEIEAGHAYGMTRVQVLRRIVGPRAWRLALPALTGE 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            + LLK++ LA  V   D++    T+  +T
Sbjct: 166 AILLLKSTVLASTVTVFDVMGTANTLRFET 195


>gi|39938564|ref|NP_950330.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39721673|dbj|BAD04163.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 601

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 4/138 (2%)

Query: 258 GGSTVSPEFMSLY---IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           G    +PE   +Y   I L   +A  I  I+   +  + +GQ+EA++ALG+T R+    V
Sbjct: 460 GWRAYNPELNPMYSGIIVLLLNSAVSITNILLQNIKFLDKGQVEASLALGMTQRQTFFCV 519

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           + PQ ++  +P +  Q++  +K+S+     VG  D+     T I QTG       I   I
Sbjct: 520 IFPQTLKRSLPFVVQQFIVNIKDSACFGGLVGLLDVAWKAKTQIVQTGSIAIPYAITACI 579

Query: 374 YLSLSIMIALFMNRLNAK 391
           YL L  +  LF+  L  +
Sbjct: 580 YLVLITIANLFVKYLEKQ 597


>gi|294676183|ref|YP_003576798.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294475003|gb|ADE84391.1| amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 232

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 48/84 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A+  EI+R GL AVP G++EAA A+G+T  +    V  P A R   P L ++ + L+K
Sbjct: 108 SCAYQTEILRGGLQAVPPGEIEAARAIGMTRAQVLARVTFPHAYRIAWPALGNEVILLMK 167

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
            S+LA  V   DL+     I +++
Sbjct: 168 ASALASIVTVFDLMGRTRQIFSRS 191


>gi|15889180|ref|NP_354861.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156999|gb|AAK87646.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 276

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 50/81 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           ++L+  TAA+ AEI+R  + +VPRGQ E A +LG++     R V+LPQA+   + P  ++
Sbjct: 150 LSLTLNTAAYQAEILRGAIRSVPRGQHEGAASLGISKFITFRKVILPQALIVALRPYGNE 209

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + ++K S++   V   DL+ 
Sbjct: 210 IILMIKGSAVVSIVTVFDLMG 230


>gi|260462848|ref|ZP_05811053.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259031492|gb|EEW32763.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 202

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 4/172 (2%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIA-LSCYTA 278
           LL + T ++  +P LVLI L Y    D  ++ Q    +G   V    ++  IA L     
Sbjct: 20  LLAVYTTVVRAVPELVLILLLYYAGTD--LINQALTAMGYQRVDISGLAAGIAVLGFVQG 77

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  ++A+P+GQ+EAA A G++     R + LP  +   IP L + +L   K++
Sbjct: 78  AYSTEVIRGAILAIPQGQIEAARAYGMSPGLMLRRITLPAMLPFAIPGLANLWLIATKDT 137

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L   VGF +L          T            +YL LS++    + R+ A
Sbjct: 138 ALLAVVGFYELALATRQAAGVTKAYFTFFFAAAVLYLLLSLISNFLIGRVEA 189


>gi|237816315|ref|ZP_04595308.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260546067|ref|ZP_05821807.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260562864|ref|ZP_05833350.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|237788382|gb|EEP62597.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260096174|gb|EEW80050.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260152880|gb|EEW87972.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
          Length = 166

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 9   IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 57

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++    +K ++L   +   +
Sbjct: 58  LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVITVVE 117

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 118 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 165


>gi|13474336|ref|NP_105904.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14025089|dbj|BAB51690.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 221

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 14/171 (8%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIA-LSCYTA 278
           LL + T ++  +P LVLI L Y    D  ++ Q    IG   V    +   IA L     
Sbjct: 39  LLAVYTTVVRAVPELVLILLLYYAGTD--LINQVLTAIGYQRVDISGLVAGIAVLGFCQG 96

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  ++A+P+GQ+EAA A G++     R + LP  +   IP L + +L   K++
Sbjct: 97  AYSTEVMRGAILAIPQGQIEAARAFGMSPSLLLRRITLPAMLPFAIPGLANLWLIATKDT 156

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM---IALFMN 386
           +L   VGF +L          T QA  +   ++  YL+  ++   + LF N
Sbjct: 157 ALLAVVGFFELTLA-------TRQAAGVTKAYLIFYLAAGVLYLAVTLFSN 200


>gi|307545357|ref|YP_003897836.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307217381|emb|CBV42651.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 237

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 51/77 (66%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+    A++ E++R  ++A+PRGQ+EAA A G +     R +++P  + + +P +++ +L
Sbjct: 108 LAFVQGAYMTEVLRGAILAIPRGQLEAADAFGFSTWARFRRIVVPAMLPNALPGMSNLWL 167

Query: 333 NLLKNSSLAVAVGFADL 349
            L+K+++L   +G+++L
Sbjct: 168 ILIKDTALISVIGYSEL 184


>gi|163855573|ref|YP_001629871.1| ABC-type amino acid transport system, permease component
           [Bordetella petrii DSM 12804]
 gi|163259301|emb|CAP41601.1| ABC-type amino acid transport system, permease component
           [Bordetella petrii]
          Length = 220

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS Y  A  +E+VRSGL +V      A+ +LG+++ +  R +  P A+R++ P     
Sbjct: 96  LTLSLYMGALTSELVRSGLRSVRPELRRASRSLGMSYWQELRHIGAPLAVRTVFPSWIGT 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            + L K+++L   VG+ +L+     +I +T +A+ I+
Sbjct: 156 LIALTKDTALVSVVGYVELLRAAQILIVRTNEALMIL 192


>gi|218662377|ref|ZP_03518307.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli IE4771]
          Length = 352

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 48/79 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA    + P  ++ 
Sbjct: 158 AMTINTAAYQAEILRGAIESVPHGQHEAAAALGIHKAIAFRKIILPQAFIVALRPYGNEI 217

Query: 332 LNLLKNSSLAVAVGFADLV 350
           + L+K S++   +   DL+
Sbjct: 218 ILLIKGSAVVAIITVLDLM 236


>gi|291519753|emb|CBK74974.1| ABC-type amino acid transport system, permease component
           [Butyrivibrio fibrisolvens 16/4]
          Length = 108

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 44/71 (61%)

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVP GQ EA  +LG  + +    +++PQ +++++P L ++++ L+K +S+A  +G  DL
Sbjct: 1   MAVPEGQFEAGRSLGFNYIQTMFHIIIPQMVKNVLPALCNEFIVLIKETSIAGYIGITDL 60

Query: 350 VSVGGTIINQT 360
              G  I  +T
Sbjct: 61  TKAGDLIRGRT 71


>gi|254459798|ref|ZP_05073214.1| glutamine ABC transporter permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206676387|gb|EDZ40874.1| glutamine ABC transporter permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 277

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 48/84 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL    +A++AEI RSG+ +V + Q  AA +LGL  R     V+LPQA+R ++P   + 
Sbjct: 152 LALILTYSAYVAEIFRSGITSVHQSQRAAAQSLGLAERDVMLFVVLPQAIRRVVPAQMNM 211

Query: 331 YLNLLKNSSLAVAVGFADLVSVGG 354
            + L K+ +L   +G  ++    G
Sbjct: 212 LIALQKDVALLSFIGPVEIFRQAG 235


>gi|238795093|ref|ZP_04638685.1| Histidine transport system permease protein hisQ [Yersinia
           intermedia ATCC 29909]
 gi|238725588|gb|EEQ17150.1| Histidine transport system permease protein hisQ [Yersinia
           intermedia ATCC 29909]
          Length = 228

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVP GQ+EAA A G T  +  R ++ P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYMAVPSGQIEAATAFGFTPSQIFRRIMFPAMMRYALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           +  +LK ++L   +G  D+V
Sbjct: 158 WQVILKATALVSILGLNDVV 177



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + IIG +   G+LS+N+L++     Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLSSNRLLSGFFECYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|254700593|ref|ZP_05162421.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 5 str. 513]
 gi|254704963|ref|ZP_05166791.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|254707524|ref|ZP_05169352.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis M163/99/10]
 gi|254708940|ref|ZP_05170751.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis B2/94]
 gi|254713633|ref|ZP_05175444.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M644/93/1]
 gi|254716013|ref|ZP_05177824.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M13/05/1]
 gi|256030466|ref|ZP_05444080.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis M292/94/1]
 gi|256059927|ref|ZP_05450112.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           neotomae 5K33]
 gi|256158450|ref|ZP_05456348.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M490/95/1]
 gi|256253870|ref|ZP_05459406.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti B1/94]
 gi|260169374|ref|ZP_05756185.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           sp. F5/99]
 gi|261217780|ref|ZP_05932061.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261221006|ref|ZP_05935287.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261315005|ref|ZP_05954202.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261316438|ref|ZP_05955635.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261321372|ref|ZP_05960569.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|261323897|ref|ZP_05963094.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261751101|ref|ZP_05994810.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261755663|ref|ZP_05999372.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|265987508|ref|ZP_06100065.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|265996966|ref|ZP_06109523.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|260919590|gb|EEX86243.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|260922869|gb|EEX89437.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261294062|gb|EEX97558.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|261295661|gb|EEX99157.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261299877|gb|EEY03374.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261304031|gb|EEY07528.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261740854|gb|EEY28780.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261745416|gb|EEY33342.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|262551434|gb|EEZ07424.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|264659705|gb|EEZ29966.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1]
          Length = 219

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 62  IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 110

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +   +
Sbjct: 111 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVITVVE 170

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 171 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 218


>gi|305663949|ref|YP_003860237.1| polar amino acid ABC transporter, inner membrane subunit
           [Ignisphaera aggregans DSM 17230]
 gi|304378518|gb|ADM28357.1| polar amino acid ABC transporter, inner membrane subunit
           [Ignisphaera aggregans DSM 17230]
          Length = 228

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 18/176 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLPTLVLIALKYQLHFDKPV 250
           SF+LG +L L    ++R F    G     +  +TF  LI G P +V +   + +++  P 
Sbjct: 31  SFILGFLLGLIIA-ITRVF----GPKFIGMIFTTFVELIRGTPMMVQL---FFVYYALPY 82

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG         +SP  +S  IA+S  +AA+ +E +R  + ++P  Q+EA+ +LGLT  + 
Sbjct: 83  LG-------IKLSP-LLSALIAISLNSAAYQSEYLRVSISSIPSSQIEASYSLGLTKTQT 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              +++PQ +R  IP LT++ + L K SS+A  +   +L+ +   I ++T + IEI
Sbjct: 135 ILSIVIPQCIRIAIPALTNEAVYLFKYSSIAYFITVPELMYISMYIGSRTFRYIEI 190



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/70 (27%), Positives = 36/70 (51%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y   I+ G   TF++  S  I   ++G ++   R+   K +  I   +VE+ R  P +
Sbjct: 11  ENYGNMIIAGLAMTFFITLSSFILGFLLGLIIAITRVFGPKFIGMIFTTFVELIRGTPMM 70

Query: 143 VVIFFLYKSV 152
           V +FF+Y ++
Sbjct: 71  VQLFFVYYAL 80


>gi|71083899|ref|YP_266619.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
 gi|91763030|ref|ZP_01264994.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
 gi|71063012|gb|AAZ22015.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
 gi|91717443|gb|EAS84094.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
          Length = 230

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 9/171 (5%)

Query: 226 TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T +I G+P L++I L +      + +   + G F +I  +     F++  +A+   + A+
Sbjct: 59  TTVIRGVPELLVIYLFFFGGSGAIMYVASIFGYFEYIEINA----FITGSVAIGIISGAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E+ R  + ++ +GQ EAA  LG++       ++LPQ +R  IP L++ +   LK++SL
Sbjct: 115 STEVFRGAIQSIDKGQFEAAKVLGVSKFVQFYKIILPQMLRLAIPNLSNVWQITLKDTSL 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               G  +++         T   +        +YL L+ +    +NRL  K
Sbjct: 175 ISVTGLVEIMRQSYIAAGSTRDPLFFYCFAAVLYLMLTFLSMKLINRLEVK 225


>gi|257461204|ref|ZP_05626302.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter gracilis RM3268]
 gi|257441578|gb|EEV16723.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter gracilis RM3268]
          Length = 217

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 29/149 (19%)

Query: 220 PLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           PLL    FL +GLP L V I+      F   ++G   F+GGS +S  F            
Sbjct: 64  PLLIQLFFLYYGLPKLGVQIS-----GFTCAIVG-LAFLGGSYMSESF------------ 105

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
                  R G  A+ + Q+E+A++LGL+  +    V+LP+A    +P +++  + LLK +
Sbjct: 106 -------RLGFEAIKKSQIESAMSLGLSEAQIVFYVVLPRAFAIALPSISANIIFLLKET 158

Query: 339 SLAVAVGFADLVSVGGTIIN---QTGQAI 364
           S+   V  ADLV     +I    +T +A+
Sbjct: 159 SIVSIVALADLVYAAKDVIGLYYKTNEAL 187


>gi|77405107|ref|ZP_00782206.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae H36B]
 gi|77176250|gb|EAO79020.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae H36B]
          Length = 123

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 48/89 (53%)

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +  + AA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +L   G
Sbjct: 11  KDNLXAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSG 70

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            T+  QT Q  +   I   IY  L+  + 
Sbjct: 71  NTVATQTYQYFQTFTIIAIIYFILTFTVT 99


>gi|114768864|ref|ZP_01446490.1| ABC transporter, permease protein, HisMQ family [alpha
           proteobacterium HTCC2255]
 gi|114549781|gb|EAU52662.1| ABC transporter, permease protein, HisMQ family [alpha
           proteobacterium HTCC2255]
          Length = 296

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 9/131 (6%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S    AF A  +   + A+PR Q+E  +A G++ ++    +  PQ     +P L++ 
Sbjct: 146 LAFSIVFGAFAANTINGAINAIPRAQIETGVAYGMSRKQIFMRIQFPQMWAYALPGLSNL 205

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQTGQAIEIILIWMFI-----YLSLSIMI 381
           ++ L+K + L   +G  D+V     +GGT   +     E   +  FI     YL LS + 
Sbjct: 206 WMILIKATPLLFLLGVQDIVYWARELGGTKTARFTYPHEDWRLGYFIVLLVFYLLLSWLS 265

Query: 382 ALFMNRLNAKI 392
            +F N+L  K+
Sbjct: 266 EIFFNKLTLKV 276


>gi|160895678|ref|YP_001561260.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160361262|gb|ABX32875.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 242

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+I EIVR+G+    RGQ+EAA ALG+      R V+L  A++ + P L+SQ + ++  
Sbjct: 102 GAYITEIVRAGIQETQRGQLEAAGALGMGRWALFRHVVLRPALQRVWPSLSSQIVIVMLG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +S+   +   DL      I ++  +A E  L+
Sbjct: 162 TSVVSQIAAQDLTFAANFIQSRNFRAFETYLV 193


>gi|325293715|ref|YP_004279579.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325061568|gb|ADY65259.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 240

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 50/84 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++    L     A++ E++R  ++A+P GQ+EAA A G++     R V+LP  + + +P
Sbjct: 106 FVAAVAVLGFVQGAYMTEVLRGAILAIPNGQIEAARAFGMSPALRFRRVVLPALLPNALP 165

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
            L + +L + K+S+L   VG+ +L
Sbjct: 166 GLANLWLAVTKDSALVAVVGYQEL 189


>gi|289672218|ref|ZP_06493108.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 112

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 54/91 (59%)

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 3   AVPPGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 62

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +  TII +T   +EI       YL ++ ++
Sbjct: 63  GMARTIIARTYLPVEIFFAAGMFYLIMTFVL 93


>gi|312863033|ref|ZP_07723271.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|322516151|ref|ZP_08069084.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|311100569|gb|EFQ58774.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|322125327|gb|EFX96682.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 307

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 16/174 (9%)

Query: 231 GLPTLVLIALKYQLHFDKPVL-----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G P LV + L Y   +  P+      G+F         P  +    A +   AA+++E +
Sbjct: 127 GTPILVQLMLTY---YGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETI 183

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + G
Sbjct: 184 RAAIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAG 243

Query: 346 FADLVS----VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +    +GG       + I + L    +Y  +SI+I      +   +A+K
Sbjct: 244 IVEMYAQAQILGGADYRYFERYISVAL----VYWVISILIENIGRSVENHMAIK 293


>gi|295698919|ref|YP_003606812.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438132|gb|ADG17301.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 245

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 23/143 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P+L +  +  F +P L        LH D P L                ++  AL+  
Sbjct: 70  RAIPVLMLIFWTFFLMPIL--------LHIDVPGLA---------------TVVCALALI 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++  V++G+ AV  GQ +AA +LG+T  +A R V LPQA+R ++P   +Q++ L+K
Sbjct: 107 GGAYLSHSVQAGIAAVGAGQAQAAASLGMTRWQALRYVQLPQAIRIMMPSFVNQWVTLIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
           ++SLA  VG  +   +   + N+
Sbjct: 167 DTSLAYIVGVPEFTFLANQVNNR 189


>gi|163868114|ref|YP_001609318.1| ABC transporter, permease protein [Bartonella tribocorum CIP
           105476]
 gi|161017765|emb|CAK01323.1| ABC transporter, permease protein [Bartonella tribocorum CIP
           105476]
          Length = 235

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 51/84 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +EI +   ++V  GQ EA+ ALGL++      V+LPQAM   + PL ++ + ++K
Sbjct: 116 SAAYQSEIFKGSFLSVTTGQREASKALGLSNSVTFFRVILPQAMIVALRPLGNELILMIK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +S++A  V   DL+ +     ++T
Sbjct: 176 SSAIASLVTVYDLMGIAKLTYSRT 199


>gi|153853974|ref|ZP_01995307.1| hypothetical protein DORLON_01298 [Dorea longicatena DSM 13814]
 gi|149753356|gb|EDM63287.1| hypothetical protein DORLON_01298 [Dorea longicatena DSM 13814]
          Length = 214

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 46/73 (63%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + AFI+EIV+  L+ +  GQ EA  +LGLT  +    +++P A +S +P L +Q++  +K
Sbjct: 98  SGAFISEIVKGALMGIDPGQKEAGASLGLTSSQTMLHLIIPPAFKSALPALFNQFITSVK 157

Query: 337 NSSLAVAVGFADL 349
           +++L  A+   ++
Sbjct: 158 DTALLSAIAVNEI 170


>gi|269219726|ref|ZP_06163580.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269210968|gb|EEZ77308.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 219

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 7/152 (4%)

Query: 238 IALKYQLHFDKPVLGQFNFI------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + L  +L  + P++ Q  FI       G  +S E  S  I LS     ++AE  RSG  +
Sbjct: 53  VGLYIELSRNTPLIVQLFFIYYGLPKAGVVLSSE-ASAIIGLSFLGGGYMAEAFRSGFDS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V   Q E+A +LG+T   A   V++PQA+   +  L +  + L+K +S+   V   DLV 
Sbjct: 112 VGTIQWESAQSLGMTRVNAMVYVIVPQALSRSVAALVANVIFLVKETSVVSVVALNDLVY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           V    I       E + + +  Y+++ + ++L
Sbjct: 172 VAREKIGNDYDTTEALFLLVAFYIAIILPVSL 203


>gi|207724365|ref|YP_002254762.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206589583|emb|CAQ36544.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 227

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 11/104 (10%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ + +AL+   +A +AEI R  ++++P  Q EAA +L    R     ++LPQ +R +
Sbjct: 93  PDWLKVTLALALPASAHVAEIFRGAVLSIPSTQWEAAASLAFRRRDILWRIVLPQCVRRM 152

Query: 324 IPPLTSQYLNLLK----NSSLAVAVGFADLVS---VGGTIINQT 360
           +P     ++NL+      ++LA  VG  DL+    +    +N+T
Sbjct: 153 LP----SWMNLVAIIAMGTALASLVGVHDLLDTAQIASNTVNRT 192



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 18/104 (17%)

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           T+ G  VGA RLS  + V  +   YV   RN+P LV+++F+             S  LPF
Sbjct: 35  TVAGLAVGALRLSPLRPVQRLAGGYVIALRNVPWLVLVYFM-------------SYALPF 81

Query: 168 GMFLNNRGLSFP-----TLTMDTNAKIFVFSFVLGIVLSLFATR 206
            + L    L FP     TL +   A   V     G VLS+ +T+
Sbjct: 82  EIVLRGHVLPFPDWLKVTLALALPASAHVAEIFRGAVLSIPSTQ 125


>gi|238797419|ref|ZP_04640918.1| Histidine transport system permease protein hisQ [Yersinia
           mollaretii ATCC 43969]
 gi|238718690|gb|EEQ10507.1| Histidine transport system permease protein hisQ [Yersinia
           mollaretii ATCC 43969]
          Length = 228

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVP GQ+EAA A G T  +  R +L P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYMAVPAGQIEAARAFGFTSSQIFRRILFPAMMRYALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           +  +LK ++L   +G  D+V
Sbjct: 158 WQVILKATALVSILGLNDVV 177



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + IIG +   G+LS+N+L++ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALCSVLLSVIIGLMGAGGKLSSNRLLSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|302876280|ref|YP_003844913.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|307687012|ref|ZP_07629458.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|302579137|gb|ADL53149.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
          Length = 221

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 58/102 (56%), Gaps = 3/102 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    ++++E  R G  AV + Q+EA +++GLT  +  R V+  QA    +P L + 
Sbjct: 93  VGLAFLGGSYMSEAFRGGFEAVSKTQVEAGLSIGLTKPQLIRYVIFLQAFAVAVPSLGAN 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI 369
            + +LK +S+  A+  ADL+ V   +I    +T +A+ ++++
Sbjct: 153 AIFILKETSIVSAIALADLMFVAKDLIGMYYKTTEALTMLVV 194


>gi|329298255|ref|ZP_08255591.1| arginine transporter permease subunit ArtQ [Plautia stali symbiont]
          Length = 152

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
            S   M++ +AL+   +A+ ++ +R  L AVP GQ+E+  ALG+        +++PQ  R
Sbjct: 8   ASAAGMTVGLALAMLYSAYASQTLRGALKAVPSGQLESGQALGMKKSAIFFRLIMPQMWR 67

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
             +P L +Q+L LLK+++L       DL+    +I  +  +     L+   IY
Sbjct: 68  HALPGLGNQWLVLLKDTALVSLTSVNDLMLQTKSIATRNQEPFTWYLVAAAIY 120


>gi|15889638|ref|NP_355319.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157536|gb|AAK88104.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 240

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 50/84 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++    L     A++ E++R  ++AVP GQ+EAA A G++     R V+LP  + + +P
Sbjct: 106 FVAAVAVLGFVQGAYMTEVLRGAILAVPNGQIEAARAFGMSPFLRFRRVVLPALLPNALP 165

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
            L + +L + K+S+L   VG+ +L
Sbjct: 166 GLANLWLAVTKDSALVAVVGYQEL 189


>gi|209516856|ref|ZP_03265706.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502672|gb|EEA02678.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 245

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 23/143 (16%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P+L +  +  F +P L        LH D P L                ++  AL+  
Sbjct: 70  RAIPVLMLIFWTFFLMPML--------LHIDVPGLA---------------TVICALALI 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++  V++G+ AV  GQ +AA +LG+T  +A R V LPQA+R ++P   +Q++ L+K
Sbjct: 107 GGAYLSHSVQAGIAAVGAGQAQAAASLGMTRWQALRYVQLPQAIRIMMPSFVNQWVTLIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQ 359
           ++SLA  VG  +   +   + N+
Sbjct: 167 DTSLAYIVGVPEFTFLANQVNNR 189


>gi|83747213|ref|ZP_00944256.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum
           UW551]
 gi|207739074|ref|YP_002257467.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726188|gb|EAP73323.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum
           UW551]
 gi|206592446|emb|CAQ59352.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 227

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 11/104 (10%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ + +AL+   +A +AEI R  ++++P  Q EAA +L    R     ++LPQ +R +
Sbjct: 93  PDWLKVTLALALPASAHVAEIFRGAVLSIPSTQWEAAASLAFRRRDILWRIVLPQCVRRM 152

Query: 324 IPPLTSQYLNLLK----NSSLAVAVGFADLVS---VGGTIINQT 360
           +P     ++NL+      ++LA  VG  DL+    +    +N+T
Sbjct: 153 LP----SWMNLVAIIAMGTALASLVGVHDLLDTAQIASNTVNRT 192



 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 18/104 (17%)

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           T+ G  VGA RLS  + V  +   YV   RN+P LV+++F+             S  +PF
Sbjct: 35  TVAGLAVGALRLSPLRPVQRLAGGYVIALRNVPWLVLVYFM-------------SYAVPF 81

Query: 168 GMFLNNRGLSFP-----TLTMDTNAKIFVFSFVLGIVLSLFATR 206
            + L    L FP     TL +   A   V     G VLS+ +T+
Sbjct: 82  EIVLRGHVLPFPDWLKVTLALALPASAHVAEIFRGAVLSIPSTQ 125


>gi|257485081|ref|ZP_05639122.1| amino acid ABC transporter protein, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|330987290|gb|EGH85393.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331010992|gb|EGH91048.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 216

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L CY AA+IAE  R  +  +P GQ EAA AL  +     R ++LPQA++ +
Sbjct: 86  PAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFSRGDTWRRIILPQALKPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  + + K + L   +   +L      I   T +  E   +   ++L++S+  +L
Sbjct: 146 LPVLGNYLIGMFKETPLLAVIAIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSL 205

Query: 384 FMNRLNAK 391
               L  +
Sbjct: 206 LFKYLERR 213


>gi|107022813|ref|YP_621140.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686947|ref|YP_840194.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105893002|gb|ABF76167.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652662|gb|ABK13301.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 244

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 8/142 (5%)

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A++  LH    V G F F         F+   ++L     A++ +I R+ L  VP GQ+E
Sbjct: 88  AIENALHGSGIVSGDFAF-------DPFVVAALSLGFIQGAYLTDIFRAALANVPVGQIE 140

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTII 357
           AA A G+T  +    + LP A R  +P + + +LN  K++S    +G F DL+       
Sbjct: 141 AAHAYGMTPWQTFTRIRLPAAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAA 200

Query: 358 NQTGQAIEIILIWMFIYLSLSI 379
             T   +   L+   ++L LSI
Sbjct: 201 GATRHYVFFYLVTAALFLLLSI 222


>gi|290509891|ref|ZP_06549262.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|289779285|gb|EFD87282.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 224

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 14/164 (8%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LVLI   Y   +  P+L       G T+S  +++  +A+S Y + F AEI RSG+ +
Sbjct: 67  IPPLVLIVWAY---YCLPILF------GLTLS-SYLTCVLAISLYGSVFFAEIFRSGMQS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  G +EA +++G++       +  P A   I+P   SQ +  +KNS LA  +   +++ 
Sbjct: 117 VDHGLVEAGLSVGMSPLTVLVRITAPVAFLRILPAFVSQCVMSVKNSVLASYIATGEILY 176

Query: 352 VGGTIINQTGQAIE----IILIWMFIYLSLSIMIALFMNRLNAK 391
            G  +   T + +E    + L ++   L LS++ +    R+ ++
Sbjct: 177 QGQRLSTATFRPLETLTFVALFFVATILPLSLLASYAERRIRSR 220


>gi|220914865|ref|YP_002490173.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219952616|gb|ACL63006.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 248

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 64/124 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+L  +  AF  EI R+G+ AVP   +EAA +L  +  +    + LP A R  +P LT+ 
Sbjct: 120 ISLGIFGGAFNVEIFRAGIEAVPDSTLEAAESLCFSRLQTYLYITLPLAFRISLPALTNN 179

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L K +SLA  +   ++  V   + +      E++L+    Y+ +  ++A  ++ +  
Sbjct: 180 LVSLAKTTSLAYIITVPEMTYVLNQVWSDNLNVPEMMLVLFGFYIVVVTLLAAGLHAIER 239

Query: 391 KIAL 394
           K+ L
Sbjct: 240 KLVL 243


>gi|170743615|ref|YP_001772270.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168197889|gb|ACA19836.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 248

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 64/124 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL  +  AF  EI R+G+ AVP   +EAA +L  +  +    V LP A R  +P LT+ 
Sbjct: 120 IALGIFGGAFNVEIFRAGIEAVPDSTLEAAESLCFSRFQTYIYVTLPLAFRISLPALTNN 179

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L K +SLA  +   ++  V   + +      E++L+    Y+ +  ++A  ++ +  
Sbjct: 180 LVSLAKTTSLAYIITVPEMTYVLNQVWSDNLNTSEMMLVLFGFYIVVVTLLAAGLHAVER 239

Query: 391 KIAL 394
           ++ L
Sbjct: 240 RLVL 243



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 5/97 (5%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L +R G+  +    PY          + G   T WL    +  + +IG L    + + ++
Sbjct: 12  LYDRTGWNFNIFYDPYEYGR-----FIAGASTTLWLIAWSLALSLVIGVLGAWAQGARSR 66

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
            + W    Y++ FRN PP++ + F Y  + +  P  D
Sbjct: 67  TLRWGVDAYIQAFRNTPPMIQLLFFYLGLGAFTPEID 103


>gi|15890239|ref|NP_355911.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158429|gb|AAK88696.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 221

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 56/109 (51%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ +   + AEIVR  L +V   Q+EAA AL  T  +    + LPQA+  ++P   +  +
Sbjct: 90  LAAHAGGYGAEIVRGALSSVSVQQLEAARALNFTRMQTLFRISLPQAVVEMMPAFGNLAI 149

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             LK SSL   +  ADL     +I N T  +  I  I +  Y ++S+++
Sbjct: 150 ETLKLSSLVSLISIADLTFAAQSIRNLTLDSTSIYSITLLCYFAMSLIL 198


>gi|332040229|gb|EGI76609.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 216

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 54/89 (60%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + ++  +GL ++  GQ EAA+A+GL   +  R VL+PQ +R   P LT+  + L+K+
Sbjct: 98  AAVLCDVFAAGLRSLHMGQREAALAVGLAPGQVLRFVLVPQMLRVTFPSLTNYAVVLIKD 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +S+A A+   +++ +   ++  T + + I
Sbjct: 158 TSIASAIAAPEIMFLARNLVTSTFETVLI 186


>gi|299541861|ref|ZP_07052184.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725599|gb|EFI66240.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 233

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 59/118 (50%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           +I  +  + A + E+ RS L  + +GQ+EAA ++GL+  +A   +++PQA+   +P + +
Sbjct: 103 FIVFAFSSTAILIEVFRSALSTIEKGQLEAAHSVGLSTFQAYTRIIIPQALVVALPNICT 162

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +NL+K +SL  A+   ++        N     +E  L    +YL L   +     R
Sbjct: 163 ATVNLIKATSLGYAMSLPEITLKAKVAANVGYNYVEAYLDIFIVYLILCSTVEYLFKR 220


>gi|312958334|ref|ZP_07772855.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311287398|gb|EFQ65958.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 221

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 8/133 (6%)

Query: 225 STFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYT 277
           +  L+F  P L  L+AL  +L  + P+L Q  F+       G  +S  F +  I ++   
Sbjct: 41  AALLVFRTPYLSRLVALYVELARNTPLLIQLFFVYFALPALGLNIS-GFWAAIITMTFLG 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A + E++R+G+ AVP  Q+E+  ++GL+  +  R V+LPQA    +P L + ++ LLK 
Sbjct: 100 GAHLTEVLRAGVEAVPLAQIESGKSIGLSDWQLLRHVILPQAGILSLPALFANFIFLLKE 159

Query: 338 SSLAVAVGFADLV 350
           +++  AV   +++
Sbjct: 160 TTVVSAVAVPEIL 172


>gi|238792192|ref|ZP_04635827.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           intermedia ATCC 29909]
 gi|238728429|gb|EEQ19948.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           intermedia ATCC 29909]
          Length = 235

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 24/233 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-------FATR-LSRHFHEKTG--KAL 219
           FL + G     L M   AK+F+ S V G++L+L       F  R LS      T   ++ 
Sbjct: 8   FLYSDGSDVTGLAM--TAKLFLLSVVPGLLLALLMAVGQAFGPRPLSWFIRSITYFFRST 65

Query: 220 PLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           PL Y+   LI+ GL    ++ L +Q   D+P    F     +T         +AL   T+
Sbjct: 66  PL-YLQLMLIYYGLSQFDIVQLGWQD--DQPFWLLFR---DATFCAT-----LALVLNTS 114

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AE++   ++  PR +  A  A G++  +  R ++LP  +R  IP L ++ + LL  +
Sbjct: 115 AYVAELLAGMMVTFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHAT 174

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+  V  ++   T       L+   +YL  + M+    +R   +
Sbjct: 175 SLASTVTLLDITGVARSLYAATYSPFIPFLMAAALYLLCTFMLIYLFSRAERR 227


>gi|319407362|emb|CBI81009.1| ABC transporter, permease protein [Bartonella sp. 1-1C]
          Length = 235

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ AEI R  L+AV   Q EA+ ALGL        ++ PQAM   + PL ++++ + K
Sbjct: 116 SAAYQAEIFRGSLLAVAAEQREASKALGLNRSTIFFKIIFPQAMVVALRPLGNEFILMTK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +S++A  V   DL+     I ++T
Sbjct: 176 SSAIASLVTVYDLMGTTKLIYSRT 199


>gi|298486823|ref|ZP_07004879.1| ABC-type amino acid transport system, permease component
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298158690|gb|EFH99754.1| ABC-type amino acid transport system, permease component
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 216

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L CY AA+IAE  R  +  +P GQ EAA AL  +     R ++LPQA++ +
Sbjct: 86  PAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFSRSDTWRRIILPQALKPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  + + K + L   +   +L      I   T +  E   +   ++L++S+  +L
Sbjct: 146 LPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSL 205

Query: 384 FMNRLNAK 391
               L  +
Sbjct: 206 LFKYLERR 213


>gi|163746020|ref|ZP_02153379.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
 gi|161380765|gb|EDQ05175.1| binding-protein-dependent transport systems inner membrane
           component [Oceanibulbus indolifex HEL-45]
          Length = 294

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G++HR+    VL+PQ     +P L++ ++ L+K 
Sbjct: 153 GAFAANVLFGAMRAVPRPQLETAEAYGMSHRQTFWRVLVPQMWVYALPGLSNLWMVLIKA 212

Query: 338 SSLAVAVGFADLV----SVGGT 355
           + L   +G  D+V     +GGT
Sbjct: 213 TPLLFLLGVEDIVYWARELGGT 234


>gi|109947816|ref|YP_665044.1| ABC-type amino-acid transport, permease component [Helicobacter
           acinonychis str. Sheeba]
 gi|109715037|emb|CAK00045.1| ABC-type amino-acid transport, permease component [Helicobacter
           acinonychis str. Sheeba]
          Length = 231

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 57/104 (54%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA S    A+ +E +R+  +++P+ Q +++++LGL + +    V+  QA++   P L++ 
Sbjct: 109 IAFSLNVGAYASETLRASFLSIPKDQWDSSLSLGLNYLQTFWHVIFFQALKVATPSLSNT 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +++L K +SLA  V  A++  +     N +   + I L    IY
Sbjct: 169 FISLFKETSLASVVTIAEIFRIAQQKANASYDFLPIYLEAALIY 212


>gi|194016194|ref|ZP_03054808.1| L-cystine transport system permease protein TcyB [Bacillus pumilus
           ATCC 7061]
 gi|194011667|gb|EDW21235.1| L-cystine transport system permease protein TcyB [Bacillus pumilus
           ATCC 7061]
          Length = 236

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 43/65 (66%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+ Y  + ++EI RS L ++P+GQ +AA+++G T ++  R V++PQ     +P L +  
Sbjct: 107 ALTLYAVSGLSEIFRSSLASIPKGQFDAALSVGFTSKQVLRRVIIPQVFPISLPLLNNML 166

Query: 332 LNLLK 336
           ++L+K
Sbjct: 167 ISLIK 171


>gi|167897972|ref|ZP_02485374.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 7894]
          Length = 229

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 11/168 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QL 244
           K+ V S    +VL L A   ++    +   ++  LY  T LI  +P LVL+ L +   Q+
Sbjct: 19  KLAVLSLAASLVLGL-AGAAAKLSSNRALASVGTLY--TTLIRAVPDLVLMLLLFYGIQI 75

Query: 245 HFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +       + +G   +  + F++  + L     A+  E  R   +AVPRGQ+EA  A 
Sbjct: 76  LLNDVT----DMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           G+   +    ++  Q MR  +P + + +  L+K ++L   +G AD+V 
Sbjct: 132 GMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVK 179


>gi|257784250|ref|YP_003179467.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
 gi|257472757|gb|ACV50876.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
          Length = 217

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 63/122 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    +++AE  R+G  +V   Q E+A  LGL+  +  + V+LPQA+   +P   + 
Sbjct: 91  VGLTFLGGSYMAEAFRAGFESVAAIQFESAQVLGLSKIQTLQHVILPQALSVAVPGFVAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K SS+   +  ADL+ V   II       E + + +  Y+ + + I+L  + L  
Sbjct: 151 VIFLIKESSVVSGIALADLMYVTKDIIGMQYDTTEALFMLVIAYVIILVPISLIGSWLER 210

Query: 391 KI 392
           ++
Sbjct: 211 RL 212


>gi|222823697|ref|YP_002575271.1| ABC transporter, His/Glu/Gln/Arg/opine family (permease protein)
           [Campylobacter lari RM2100]
 gi|222538919|gb|ACM64020.1| conserved hypothetical protein, ABC transporter,
           His/Glu/Gln/Arg/opine family (permease protein)
           [Campylobacter lari RM2100]
          Length = 219

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 51/88 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S +    + ++VRS L ++P+ Q E+ ++LG T  +    +++P ++R ++P   + 
Sbjct: 92  IVFSIWGVFEMMDLVRSSLASIPKHQYESGLSLGFTKLQVYLFIIIPLSLRRLLPTSINL 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +  ++K++S+   +G  +L+ VG  +I 
Sbjct: 152 FTRIIKSTSVIYLIGGIELIKVGQQVIE 179


>gi|241762910|ref|ZP_04760973.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241368085|gb|EER62290.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 250

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G + ++P F+ + + +S +   F AE +R+G+ AVP   +EAA +LG + R+    V LP
Sbjct: 110 GNNPLTP-FVWVVVVVSLHKGVFHAEALRAGIEAVPATTLEAARSLGFSQRQLLTRVQLP 168

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+R  +P L +  ++L+K +++A A+   D+
Sbjct: 169 LAVRFALPSLVNNLVDLVKMTAVASAIAVGDV 200


>gi|319405830|emb|CBI79462.1| ABC transporter, permease protein [Bartonella sp. AR 15-3]
          Length = 235

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 49/84 (58%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A+ AEI R  L+AV   Q EA+ ALGL        ++ PQAM + + PL ++++ + K
Sbjct: 116 SSAYQAEIFRGSLLAVATEQREASKALGLDRFTIFFKIIFPQAMVAALRPLGNEFILMTK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +S++A  V   DL+     I ++T
Sbjct: 176 SSAIASLVTVYDLMGTTKLIYSRT 199


>gi|319899029|ref|YP_004159122.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
 gi|319402993|emb|CBI76548.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
          Length = 233

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 5/167 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYI 271
           K  KA+  L+ S F   GLP L+ + L Y       +   F+F+    +     F++  +
Sbjct: 53  KIVKAIATLFSSVFR--GLPELLTLFLVYY-GLQNFIQAIFDFLNIEIIFSINAFIAGVL 109

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A S   AAF  E+         + Q EAA  LGL+       ++ PQ +R+ +P L++ +
Sbjct: 110 AFSMVFAAFSCEVWLGAFRIFDKSQYEAAQVLGLSCSTTFFRIVFPQLIRNALPGLSNNW 169

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           L LLK++SL   +   DL+         T + I   L+   IYL  S
Sbjct: 170 LTLLKDTSLVSTISLLDLMRQTNLAAAATNEPILFYLLACLIYLLFS 216


>gi|53722004|ref|YP_110989.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|67639787|ref|ZP_00438621.1| histidine transport system permease protein HisQ [Burkholderia
           mallei GB8 horse 4]
 gi|77358792|ref|YP_338462.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|121597350|ref|YP_989821.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124382545|ref|YP_001024299.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126447794|ref|YP_001078281.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|126456343|ref|YP_001075390.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           pseudomallei 1106a]
 gi|134278817|ref|ZP_01765530.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 305]
 gi|167002834|ref|ZP_02268624.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei PRL-20]
 gi|167723384|ref|ZP_02406620.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei DM98]
 gi|167742355|ref|ZP_02415129.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 14]
 gi|167819526|ref|ZP_02451206.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 91]
 gi|167827899|ref|ZP_02459370.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 9]
 gi|167849366|ref|ZP_02474874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei B7210]
 gi|167906309|ref|ZP_02493514.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei NCTC 13177]
 gi|226197595|ref|ZP_03793170.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pakistan 9]
 gi|237510321|ref|ZP_04523036.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242311448|ref|ZP_04810465.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106b]
 gi|254174566|ref|ZP_04881228.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|254183461|ref|ZP_04890053.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1655]
 gi|254190089|ref|ZP_04896598.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pasteur 52237]
 gi|254193051|ref|ZP_04899486.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei S13]
 gi|254200693|ref|ZP_04907058.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei FMH]
 gi|254204668|ref|ZP_04911021.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei JHU]
 gi|254264122|ref|ZP_04954987.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1710a]
 gi|254300362|ref|ZP_04967808.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 406e]
 gi|254356910|ref|ZP_04973185.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei 2002721280]
 gi|52212418|emb|CAH38443.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|66967590|gb|AAY59147.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|121225148|gb|ABM48679.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124290565|gb|ABM99834.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126230111|gb|ABN93524.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106a]
 gi|126240648|gb|ABO03760.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|134249236|gb|EBA49317.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 305]
 gi|147748305|gb|EDK55380.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei FMH]
 gi|147754254|gb|EDK61318.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei JHU]
 gi|148025937|gb|EDK84060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei 2002721280]
 gi|157810178|gb|EDO87348.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 406e]
 gi|157937766|gb|EDO93436.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pasteur 52237]
 gi|160695612|gb|EDP85582.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|169649805|gb|EDS82498.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei S13]
 gi|184213994|gb|EDU11037.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1655]
 gi|225930204|gb|EEH26216.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pakistan 9]
 gi|235002526|gb|EEP51950.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|238520391|gb|EEP83851.1| histidine transport system permease protein HisQ [Burkholderia
           mallei GB8 horse 4]
 gi|242134687|gb|EES21090.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106b]
 gi|243061529|gb|EES43715.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei PRL-20]
 gi|254215124|gb|EET04509.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1710a]
          Length = 229

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFI 281
           T LI  +P LVL+ L +   Q+  +       + +G   +  + F++  + L     A+ 
Sbjct: 54  TTLIRAVPDLVLMLLLFYGIQILLNDVT----DMLGAEQIDIDPFVAGIVTLGFIYGAYF 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   +AVPRGQ+EA  A G+   +    ++  Q MR  +P + + +  L+K ++L 
Sbjct: 110 TETFRGAFLAVPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALV 169

Query: 342 VAVGFADLVS 351
             +G AD+V 
Sbjct: 170 SIIGLADVVK 179


>gi|163747481|ref|ZP_02154832.1| putative amino acid ABC transporter permease protein [Oceanibulbus
           indolifex HEL-45]
 gi|161379237|gb|EDQ03655.1| putative amino acid ABC transporter permease protein [Oceanibulbus
           indolifex HEL-45]
          Length = 221

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 9/152 (5%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y  HF    LG F    G  +SP + +L   ++   A ++ E  R  + A+P  Q+ A  
Sbjct: 75  YMAHFG---LGSF----GIYLSP-YAALLAGIAFNNAGYLCETFRGAMRAIPGTQLRAGR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQT 360
           +LG+   KA RL+++PQ  R    P T+Q +  +  +SL V VG  +DL  V   +  ++
Sbjct: 127 SLGMGQAKAFRLIIVPQMFRISFLPTTNQMIWAILMTSLGVTVGLNSDLAGVTQDLNARS 186

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +  E   +   IY  ++  + L    L A++
Sbjct: 187 FRTFEFFALAAVIYYVIAKAVMLGARLLAARL 218


>gi|39938976|ref|NP_950742.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39722085|dbj|BAD04575.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 244

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 51/80 (63%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AE++   +     GQ+EA+++LG+T  +  + V+ PQ +R  +  ++++++  +K
Sbjct: 123 SAAYLAEVMIKNMEFFDSGQIEASLSLGMTQTQTFKKVVCPQVVRKSLLRISNEFIVNIK 182

Query: 337 NSSLAVAVGFADLVSVGGTI 356
           +SS+   +G  +L + G T+
Sbjct: 183 DSSVFGVIGINELYNAGSTV 202


>gi|13470760|ref|NP_102329.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
 gi|14021503|dbj|BAB48115.1| probable permease of ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 273

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 16/165 (9%)

Query: 193 SFVLGIVLSLFAT--RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKP 249
           S VLG VLS+     R+SR+    +G    L Y   +   G P LV   L  Y L   +P
Sbjct: 73  SMVLGAVLSMPVAYGRMSRN-RILSG----LAYCYVYFFRGTPLLVQTFLIYYGLGSFRP 127

Query: 250 VL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            L   G ++F   +     F     A +  TAA+ AEI+R  + +V RGQ E A +LGL 
Sbjct: 128 ELQMIGLWDFFKDA-----FNCGVFAFALNTAAYQAEILRGAIESVHRGQWEGAASLGLH 182

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
             +  R ++LPQA+   + P  ++ + ++K S++   +   DL+ 
Sbjct: 183 KLQTLRKIILPQALIVALRPYGNELILMVKASAIVAIITVYDLMG 227



 Score = 36.6 bits (83), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 36/75 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + YA A L G   T  L    M+   ++   V  GR+S N++++ +   YV  FR  P L
Sbjct: 53  AKYAPAYLSGLGVTLSLVAISMVLGAVLSMPVAYGRMSRNRILSGLAYCYVYFFRGTPLL 112

Query: 143 VVIFFLYKSVLSVLP 157
           V  F +Y  + S  P
Sbjct: 113 VQTFLIYYGLGSFRP 127


>gi|329117796|ref|ZP_08246513.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326908201|gb|EGE55115.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 267

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 12/128 (9%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+++E +R+ +++V  G++EAA +LG+++++  + V++P A     P L +  
Sbjct: 130 AFAFNEAAYMSETIRAAILSVDDGEIEAAKSLGMSNKQVYQRVIVPNAAVVATPTLINGL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L++         +I+ F+ +
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYW--------LISFFVEQ 241

Query: 388 LNAKIALK 395
           L A I  +
Sbjct: 242 LGAYIERR 249


>gi|302671819|ref|YP_003831779.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus
           B316]
 gi|302396292|gb|ADL35197.1| amino acid ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 224

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 17/168 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S VLG+ + +  T  +R       KA+  LY+ T  I  +P +VL+ + Y        
Sbjct: 34  VISIVLGLAVGVLMTSKNRAL-----KAVLRLYLETVRI--MPQMVLLFIVY-------- 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G    + G  +S E +S  I    +  A + ++VR  + ++P+ Q E+A ALG    + 
Sbjct: 79  FGSTR-VFGLDISAE-ISAIIVFVFWGTAEMGDLVRGSIKSIPKIQYESAYALGFNKTQV 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              ++ PQ +R ++P   +    ++K +SL + +G  +++ V   II 
Sbjct: 137 HFYIIFPQTLRRLLPLSINLVTRMIKTTSLVMMIGIVEVLKVAQQIIE 184


>gi|298291226|ref|YP_003693165.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927737|gb|ADH88546.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 285

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q    G     P+++   +  S    A +AEIVR  + +VP  Q EAA +L  T R+   
Sbjct: 139 QVTIFGVQIPLPDWVKATVGFSLPVMANVAEIVRGAVRSVPSTQWEAAESLAFTPRQTMW 198

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            ++LPQ ++ ++PP  + Y  +   +  A  VG ++++++   +    G   E+
Sbjct: 199 RIILPQCVKRMLPPWMNLYSLVTMATVQASIVGVSEMLTLTAQVHTAEGGRPEL 252



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 60  GIGFLSERAGFEIDQG-IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
           G+   +  A  + D   + P      +A  +L GF     ++   M   T  G  VG G 
Sbjct: 43  GLALFAGTAWAQADNAQLPPLEVIVKWAPLLLSGFAFNILISMIAMAIGTGAGLGVGLGM 102

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +S N L+A IC    + FRN P LV++FF+
Sbjct: 103 ISENPLLARICWALTQFFRNAPWLVLLFFV 132


>gi|238751271|ref|ZP_04612765.1| Histidine transport system permease protein hisQ [Yersinia rohdei
           ATCC 43380]
 gi|238710545|gb|EEQ02769.1| Histidine transport system permease protein hisQ [Yersinia rohdei
           ATCC 43380]
          Length = 228

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 8/129 (6%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPEFMSL-YIALSCYTAAFI 281
           T LI G+P LVL+ L +   Q+  +         +G S ++ + +S   I L     A+ 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQITLNSIT----ESLGFSQINIDPLSAGIITLGFIYGAYF 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   +AVP GQ+EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L 
Sbjct: 109 TETFRGAYMAVPMGQIEAAKAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALV 168

Query: 342 VAVGFADLV 350
             +G  D+V
Sbjct: 169 SILGLNDVV 177



 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + IIG +   G+LS+N+L++ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLSSNRLLSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|22124841|ref|NP_668264.1| inner membrane ABC transporter permease [Yersinia pestis KIM 10]
 gi|45440528|ref|NP_992067.1| putative amino acid ABC transporter permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51595217|ref|YP_069408.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808738|ref|YP_652654.1| putative amino acid ABC transporter permease [Yersinia pestis
           Antiqua]
 gi|108811005|ref|YP_646772.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Nepal516]
 gi|145600151|ref|YP_001164227.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Pestoides F]
 gi|149364903|ref|ZP_01886938.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CA88-4125]
 gi|153947455|ref|YP_001402149.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162419614|ref|YP_001607784.1| amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926646|ref|ZP_02222478.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165936022|ref|ZP_02224592.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011080|ref|ZP_02231978.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212889|ref|ZP_02238924.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399264|ref|ZP_02304788.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421700|ref|ZP_02313453.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423711|ref|ZP_02315464.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167468795|ref|ZP_02333499.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170025545|ref|YP_001722050.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894234|ref|YP_001871346.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218930281|ref|YP_002348156.1| putative amino acid ABC transporter permease [Yersinia pestis CO92]
 gi|229838867|ref|ZP_04459026.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229896360|ref|ZP_04511529.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Pestoides A]
 gi|229899436|ref|ZP_04514579.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229901224|ref|ZP_04516346.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Nepal516]
 gi|270489412|ref|ZP_06206486.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504972|ref|YP_003569034.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Z176003]
 gi|21957670|gb|AAM84515.1|AE013696_8 putative inner membrane permease of ABC transporter [Yersinia
           pestis KIM 10]
 gi|45435385|gb|AAS60944.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51588499|emb|CAH20107.1| putative amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774653|gb|ABG17172.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Nepal516]
 gi|108780651|gb|ABG14709.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Antiqua]
 gi|115348892|emb|CAL21849.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CO92]
 gi|145211847|gb|ABP41254.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Pestoides F]
 gi|149291316|gb|EDM41390.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CA88-4125]
 gi|152958950|gb|ABS46411.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162352429|gb|ABX86377.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Angola]
 gi|165916167|gb|EDR34774.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165921574|gb|EDR38771.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165990080|gb|EDR42381.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166205676|gb|EDR50156.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960619|gb|EDR56640.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051768|gb|EDR63176.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057881|gb|EDR67627.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169752079|gb|ACA69597.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697260|gb|ACC87889.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681153|gb|EEO77247.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Nepal516]
 gi|229687838|gb|EEO79911.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229695233|gb|EEO85280.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700636|gb|EEO88666.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Pestoides A]
 gi|262363036|gb|ACY59757.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis D106004]
 gi|262366960|gb|ACY63517.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis D182038]
 gi|270337916|gb|EFA48693.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355431|gb|ADE65772.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Z176003]
 gi|320016445|gb|ADW00017.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 222

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 24/134 (17%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP     AL  +L   +  L                   +A++    A+  EI+R
Sbjct: 75  FIVFGLP-----ALGLKLSAGQAAL-------------------LAMTINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ A  +GQ EAA  LGL+  +    V+LP +++ I P L SQ + ++  S++   V F
Sbjct: 111 SGIQASAKGQWEAARVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSF 170

Query: 347 ADLVSVGGTIINQT 360
            +L      I ++T
Sbjct: 171 EELTFAANLIQSRT 184


>gi|154483452|ref|ZP_02025900.1| hypothetical protein EUBVEN_01155 [Eubacterium ventriosum ATCC
           27560]
 gi|149735704|gb|EDM51590.1| hypothetical protein EUBVEN_01155 [Eubacterium ventriosum ATCC
           27560]
          Length = 225

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 17/150 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG +L +  T        K  K +  +Y+    I  +P LVL+ L Y        
Sbjct: 34  IFSIILGFILGMIMTS-----KNKVVKLICRIYLEIVRI--MPQLVLLFLVY-------- 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G    +G +   P  ++  I  + +  A + ++VRS LI++P+ Q E+   LGLT  + 
Sbjct: 79  FGAAKHLGMNM--PGELAAVIVFTFWGTAEMGDLVRSALISIPKHQYESGYGLGLTKLQV 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
              ++ PQ +R ++P   +    ++K +SL
Sbjct: 137 FIYIIFPQTIRRLLPSAINLLTRMIKTTSL 166



 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G   T  +A   MI + I+G ++G    S NK+V  ICR+Y+E+ R +P LV++F +Y
Sbjct: 21  GLWVTLRIALIAMIFSIILGFILGMIMTSKNKVVKLICRIYLEIVRIMPQLVLLFLVY 78


>gi|167914634|ref|ZP_02501725.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 112]
 gi|217419115|ref|ZP_03450622.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 576]
 gi|217398419|gb|EEC38434.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 576]
          Length = 229

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)

Query: 226 TFLIFGLPTLVLIALKY---QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFI 281
           T LI  +P LVL+ L +   Q+  +       + +G   +  + F++  + L     A+ 
Sbjct: 54  TTLIRAVPDLVLMLLLFYGIQILLNDVT----DMLGAEQIDIDPFVAGIVTLGFIYGAYF 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R   +AVPRGQ+EA  A G+   +    ++  Q MR  +P + + +  L+K ++L 
Sbjct: 110 TETFRGAFLAVPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALV 169

Query: 342 VAVGFADLVS 351
             +G AD+V 
Sbjct: 170 SIIGLADVVK 179


>gi|126740696|ref|ZP_01756382.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126718211|gb|EBA14927.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 268

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 24/187 (12%)

Query: 227 FLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           FL  G P  +     Y    QL    PV   F        S  ++   I L   TAA+ A
Sbjct: 81  FLFRGSPLFIQFFFAYFLFLQLKQVSPVFNAF--------SSAWLGALIVLFLNTAAYSA 132

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI    L ++P+G +EAA A GLT     R ++ P  MR   P  T++ + L   ++L  
Sbjct: 133 EIFYGALRSIPKGDIEAADAYGLTGWSRFRRIMWPTMMRLAWPSYTNEAIFLFHATTLVF 192

Query: 343 AVGFADLVSVGGTIINQTGQAIEI--------ILIWMFIYLSLSIMIALF---MNRLNAK 391
             GF      G  +      A +         IL + FI L+L ++IA+F     RLN  
Sbjct: 193 FSGFPTWRQQGDALYYARYFADKTFNPFIPYPILAFYFILLTL-VIIAIFGVVNKRLNRH 251

Query: 392 IALKEKK 398
           +   +++
Sbjct: 252 LPQTQRR 258


>gi|288959644|ref|YP_003449985.1| histidine transport system permease protein [Azospirillum sp. B510]
 gi|288911952|dbj|BAI73441.1| histidine transport system permease protein [Azospirillum sp. B510]
          Length = 251

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 9/132 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T ++ G+P L++I   Y L F        + G F + G   +   F+   +++   + A+
Sbjct: 77  TTVVRGIPELLVI---YLLFFGGNSMATAIAGVFGYDGRVELDA-FIIGMLSVGLISGAY 132

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E++R  + +VP GQ+EAA A G++     R VL+PQ MR  +P L + +   LK+++L
Sbjct: 133 STEVIRGAVQSVPFGQIEAARACGMSRWLILRRVLVPQTMRFALPGLGNVWQLTLKDTAL 192

Query: 341 AVAVGFADLVSV 352
                 A+L+ V
Sbjct: 193 VSVTSLAELMRV 204


>gi|6685718|sp|P72295|OCCQ_RHIME RecName: Full=Octopine transport system permease protein occQ
 gi|1519472|gb|AAB07518.1| OccQ [Sinorhizobium meliloti]
          Length = 237

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 7/124 (5%)

Query: 231 GLPTLVLIALKYQLHFDKPVL--GQFNFIG--GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           G+P L++I   Y  +F    L  G  +  G  G   +P F++  +A+   +AA+  +++R
Sbjct: 67  GIPDLLVI---YLFYFGSSSLISGVGSLFGSDGFVSAPAFLTGALAIGLVSAAYQTQVLR 123

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             ++A+ +G++EA  A G+ +    R ++LPQA R  +P + + +  +LK S+L   +G 
Sbjct: 124 GAVLALNKGEIEAGRAYGMGYFLLFRRIILPQAARHALPGVGNVWQLVLKESALISVIGL 183

Query: 347 ADLV 350
            +L+
Sbjct: 184 VELM 187


>gi|319780066|ref|YP_004139542.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317165954|gb|ADV09492.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 283

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 4/131 (3%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIA-LSCYTA 278
           LL + T ++  +P LVLI L Y    D  ++ Q    +G   V    ++  IA L     
Sbjct: 101 LLAVYTTIVRAVPELVLILLLYYAGTD--LINQALTAMGYQRVDVSGLAAGIAVLGFVQG 158

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  ++A+P+GQ+EAA A G++     R + LP  +   IP L + +L   K++
Sbjct: 159 AYSTEVIRGAILAIPQGQIEAARAYGMSPGLMLRRITLPSMLPFAIPGLANLWLIATKDT 218

Query: 339 SLAVAVGFADL 349
           +L   VGF +L
Sbjct: 219 ALLAVVGFYEL 229


>gi|238785201|ref|ZP_04629193.1| Histidine transport system permease protein hisQ [Yersinia
           bercovieri ATCC 43970]
 gi|238713879|gb|EEQ05899.1| Histidine transport system permease protein hisQ [Yersinia
           bercovieri ATCC 43970]
          Length = 228

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 14/132 (10%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI G+P LVL+      L+  L+     LG  Q N      + P    + I L     
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQITLNSVTESLGFEQIN------IDPLSAGI-ITLGFIYG 105

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVP GQ+EAA A G T  +  R ++ P  MR  +P + + +  +LK +
Sbjct: 106 AYFTETFRGAYMAVPAGQIEAATAFGFTPSQIFRRIMFPAMMRYALPGIGNNWQVILKAT 165

Query: 339 SLAVAVGFADLV 350
           +L   +G  D+V
Sbjct: 166 ALVSILGLNDVV 177



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + IIG +   G+LS+N+L++ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALCSVLLSVIIGLMGAGGKLSSNRLLSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|317125236|ref|YP_004099348.1| amino acid ABC transporter permease [Intrasporangium calvum DSM
           43043]
 gi|315589324|gb|ADU48621.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 297

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 62/110 (56%), Gaps = 11/110 (10%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N +  S ++P   ++   L+ Y  + +AE++RSG          A +++GLT  +  R +
Sbjct: 130 NNVFDSDINP-LAAVITGLTLYNGSVVAELIRSG----------AGLSIGLTPGQTLRSI 178

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LLPQA+ +++P L SQ + +LK+++L   + + +L++  G I +  G  +
Sbjct: 179 LLPQAITAMLPSLVSQLVVVLKDTALGAIITYDELLNKFGQIGSYKGNPV 228



 Score = 37.7 bits (86), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E+   + ++   P+ +   +   ++ G + T   A   +  A I G   G GR+S + 
Sbjct: 40  LGEKGNLDAEK-WTPFLTGEIWVEYLIPGLLTTLKAAVISVALAGIFGVAFGMGRVSNHA 98

Query: 124 LVAWICRVYVEVFRNIPPLVVI---FFLYKS 151
            V W+  + VE FR++P LV++   F+ Y +
Sbjct: 99  AVRWLSTIVVEFFRSVPVLVMMIAAFYYYSA 129


>gi|167922530|ref|ZP_02509621.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei BCC215]
          Length = 229

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTVSPE-FMSLYIALSCYTAAFIA 282
           T LI  +P LVL+ L   L +   VL     + +G   +  + F++  + L     A+  
Sbjct: 54  TTLIRAVPDLVLMLL---LFYGIQVLLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFT 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R   +AVPRGQ+EA  A G+   +    ++  Q MR  +P + + +  L+K ++L  
Sbjct: 111 ETFRGAFLAVPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVS 170

Query: 343 AVGFADLVS 351
            +G AD+V 
Sbjct: 171 IIGLADVVK 179


>gi|302337869|ref|YP_003803075.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301635054|gb|ADK80481.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 218

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++SP F +    LS  ++AF++EI  SGL ++  GQ  AA ++G+   +   L++ PQ
Sbjct: 82  GISLSP-FGTGVCVLSFTSSAFMSEIFLSGLRSIDTGQYFAADSIGMNFFQKMTLIIFPQ 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            ++  +P +  Q +  +K++S+   VG A++V
Sbjct: 141 MIKLTLPSIVGQVIMTIKDTSIVSLVGLAEVV 172


>gi|114763120|ref|ZP_01442546.1| ABC transporter, permease protein, HisMQ family [Pelagibaca
           bermudensis HTCC2601]
 gi|114544173|gb|EAU47182.1| ABC transporter, permease protein, HisMQ family [Roseovarius sp.
           HTCC2601]
          Length = 293

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVP  Q+E A A G+THR+    VL+PQ     +P L++ ++ L+K 
Sbjct: 153 GAFAANVLYGAMRAVPHAQLETAEAYGMTHRQTFWRVLIPQMWVYALPGLSNLWMVLIKA 212

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 213 TPLLFLLGVEDIV 225


>gi|224823569|ref|ZP_03696678.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224604024|gb|EEG10198.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 229

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 50/80 (62%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++  F    +AL+   AA++AE +R+G+I VP G+ EAA+A G+    +   ++LP+A+ 
Sbjct: 94  LADAFNCALLALTLNIAAYMAEDLRAGIIGVPHGEKEAALAYGMGRCGSYLHIILPRAIG 153

Query: 322 SIIPPLTSQYLNLLKNSSLA 341
              P L ++ ++ LK S+LA
Sbjct: 154 IAAPALGNEVVSQLKASALA 173


>gi|84688031|ref|ZP_01015893.1| ABC transporter, permease protein, HisMQ family protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84663971|gb|EAQ10473.1| ABC transporter, permease protein, HisMQ family protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 294

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + +VPR QME A A G +HR+A   +L+PQ     +P L++ ++ L+K 
Sbjct: 153 GAFAANVLFGAMRSVPRAQMETAEAYGFSHRQAFWRILVPQMWLYALPGLSNLWMILIKA 212

Query: 338 SSLAVAVGFADLV----SVGGT 355
           + L   +G  D+V     +GG+
Sbjct: 213 TPLLFLLGVEDIVYWARELGGS 234


>gi|312114910|ref|YP_004012506.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220039|gb|ADP71407.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 229

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P + SL +  +  TAA+ AEI+   + AVPRGQ+EAA A  ++     R ++LPQA R 
Sbjct: 95  DPFYCSL-LTFTLNTAAYQAEILAGAVRAVPRGQVEAAKAAAMSPALVARRIVLPQAARL 153

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            + PL ++ + ++K S+LA  V   DL++       +T
Sbjct: 154 ALRPLGNELILMVKASALASVVTVYDLLATAKLAFQRT 191


>gi|225853390|ref|YP_002733623.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis ATCC 23457]
 gi|265993715|ref|ZP_06106272.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis bv. 3 str. Ether]
 gi|265999280|ref|ZP_05465661.2| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis bv. 2 str. 63/9]
 gi|225641755|gb|ACO01669.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
 gi|262764696|gb|EEZ10617.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis bv. 3 str. Ether]
 gi|263093031|gb|EEZ17181.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis bv. 2 str. 63/9]
          Length = 232

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 75  IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++    +K ++L   +   +
Sbjct: 124 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVITVVE 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 184 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 231


>gi|170694816|ref|ZP_02885966.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140176|gb|EDT08354.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 214

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  TAAF  EI R+ LI  PR Q +AA+A  +  R   R +++PQ  R+ +P L S+
Sbjct: 87  LALTLSTAAFNCEIWRAALINFPRDQYDAALAFAMPRRLRFRRIVMPQIWRAALPGLVSE 146

Query: 331 YLNLLKNSSLAVAVGFADL 349
               +K++     +G  ++
Sbjct: 147 MTLQIKSTPAVAVIGIVEI 165


>gi|71735563|ref|YP_274485.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|71556116|gb|AAZ35327.1| amino acid ABC transporter protein, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 216

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L CY AA+IAE  R  +  +P GQ EAA AL  +     R ++LPQA++ +
Sbjct: 86  PAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFSRGDTWRRIILPQALKPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  + + K + L   +   +L      I   T +  E   +   ++L++S+  +L
Sbjct: 146 LPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSL 205

Query: 384 FMNRLNAK 391
               L  +
Sbjct: 206 LFKYLERR 213


>gi|227818595|ref|YP_002822566.1| ArtQ, ABC-type arginine transport system, permease component ArtQ
           [Sinorhizobium fredii NGR234]
 gi|36958850|gb|AAQ87275.1| Histidine transport system permease protein hisQ [Sinorhizobium
           fredii NGR234]
 gi|227337594|gb|ACP21813.1| putative ArtQ, ABC-type arginine transport system, permease
           component ArtQ [Sinorhizobium fredii NGR234]
          Length = 240

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 48/84 (57%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++    L     A++ E+ R  ++A+P GQ+EAA A G+      R ++LP  M + +P
Sbjct: 106 FVAAVAVLGIVQGAYMTEVFRGAILAIPVGQIEAAAAFGMRPSLRFRRIVLPALMPNALP 165

Query: 326 PLTSQYLNLLKNSSLAVAVGFADL 349
            L + ++ + K+S+L   VG+ +L
Sbjct: 166 GLANLWMCVTKDSALIAVVGYQEL 189


>gi|254475611|ref|ZP_05088997.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ruegeria sp. R11]
 gi|214029854|gb|EEB70689.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ruegeria sp. R11]
          Length = 268

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  ++   I L   TAA+ AEI    L ++P+G +EAA A GL+     R ++ P  MR 
Sbjct: 113 SAAWLGALIVLILNTAAYSAEIFYGALRSIPKGDIEAADAYGLSGWTRFRRIMWPTMMRL 172

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI--------ILIWMFIY 374
             P  T++ + L   ++L    GF      G  +      A +         IL + FI 
Sbjct: 173 AWPSYTNEAIFLFHATTLVFFSGFPAWRQQGDALYYANYFADKTFNPFVPYPILAFYFIL 232

Query: 375 LSLSI--MIALFMNRLNAKIALKEKK 398
           L+L I  +  +   RLNA +  +EKK
Sbjct: 233 LTLCIIGLFGIINRRLNAHLP-QEKK 257


>gi|300868856|ref|ZP_07113462.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC
           6506]
 gi|300333073|emb|CBN58654.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC
           6506]
          Length = 224

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 61/107 (57%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+    A+  EI+R+G+ ++ +GQ+EA +ALG    +  R ++L  A+ ++ P L SQ
Sbjct: 95  LALAINFGAYSTEIIRAGIESIRKGQIEAGLALGFKKLQIFRHIILIPALGNVYPSLVSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +  +  +S+   +   +L  VG  + ++T ++ EI L    IY+ +
Sbjct: 155 IVIAILFTSVVSQISAEELTFVGNYLQSRTFRSFEIYLTITLIYVGI 201


>gi|22125503|ref|NP_668926.1| histidine transport system permease HisQ [Yersinia pestis KIM 10]
 gi|45442178|ref|NP_993717.1| histidine transport system permease HisQ [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596928|ref|YP_071119.1| ABC histidine transporter, permease subunit HisQ [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808062|ref|YP_651978.1| histidine transport system permease HisQ [Yersinia pestis Antiqua]
 gi|108812334|ref|YP_648101.1| histidine transport system permease protein HisQ [Yersinia pestis
           Nepal516]
 gi|145599264|ref|YP_001163340.1| histidine transport system permease protein HisQ [Yersinia pestis
           Pestoides F]
 gi|149365249|ref|ZP_01887284.1| histidine transport system permease protein HisQ [Yersinia pestis
           CA88-4125]
 gi|153950649|ref|YP_001400408.1| histidine ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162418808|ref|YP_001604960.1| histidine transport system permease HisQ [Yersinia pestis Angola]
 gi|165925202|ref|ZP_02221034.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937200|ref|ZP_02225765.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008559|ref|ZP_02229457.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166214201|ref|ZP_02240236.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399503|ref|ZP_02305027.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421208|ref|ZP_02312961.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424744|ref|ZP_02316497.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167469030|ref|ZP_02333734.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           FV-1]
 gi|186896008|ref|YP_001873120.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929847|ref|YP_002347722.1| histidine transport system permease HisQ [Yersinia pestis CO92]
 gi|229838347|ref|ZP_04458506.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895377|ref|ZP_04510550.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|229898913|ref|ZP_04514058.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902687|ref|ZP_04517804.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|270490136|ref|ZP_06207210.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504640|ref|YP_003568702.1| histidine transport system permease protein HisQ [Yersinia pestis
           Z176003]
 gi|21958400|gb|AAM85177.1|AE013764_1 histidine ABC transport system inner membrane permease [Yersinia
           pestis KIM 10]
 gi|45437042|gb|AAS62594.1| histidine transport system permease protein HisQ [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590210|emb|CAH21847.1| ABC histidine transporter, permease subunit HisQ [Yersinia
           pseudotuberculosis IP 32953]
 gi|108775982|gb|ABG18501.1| histidine transport system permease protein HisQ [Yersinia pestis
           Nepal516]
 gi|108779975|gb|ABG14033.1| histidine transport system permease protein HisQ [Yersinia pestis
           Antiqua]
 gi|115348458|emb|CAL21394.1| histidine transport system permease protein HisQ [Yersinia pestis
           CO92]
 gi|145210960|gb|ABP40367.1| histidine transport system permease protein HisQ [Yersinia pestis
           Pestoides F]
 gi|149291662|gb|EDM41736.1| histidine transport system permease protein HisQ [Yersinia pestis
           CA88-4125]
 gi|152962144|gb|ABS49605.1| histidine ABC transporter, permease protein HisQ [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351623|gb|ABX85571.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           Angola]
 gi|165915063|gb|EDR33675.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922809|gb|EDR39960.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992941|gb|EDR45242.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166204557|gb|EDR49037.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960697|gb|EDR56718.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167052007|gb|EDR63415.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056626|gb|EDR66395.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|186699034|gb|ACC89663.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229680134|gb|EEO76233.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|229688461|gb|EEO80532.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694713|gb|EEO84760.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701685|gb|EEO89711.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|262362701|gb|ACY59422.1| histidine transport system permease protein HisQ [Yersinia pestis
           D106004]
 gi|262366628|gb|ACY63185.1| histidine transport system permease protein HisQ [Yersinia pestis
           D182038]
 gi|270338640|gb|EFA49417.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355099|gb|ADE65440.1| histidine transport system permease protein HisQ [Yersinia pestis
           Z176003]
 gi|320014577|gb|ADV98148.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 228

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AV +GQ+EAA A G T  +  R ++ P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYMAVSKGQIEAATAFGFTSSQIFRRIMFPAMMRYALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           +  +LK ++L   +G  D+V
Sbjct: 158 WQVILKATALVSILGLNDVV 177



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + +IG +   G+LS+N+LV+ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALFSVLLSVVIGLMGAGGKLSSNRLVSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|325062211|gb|ADY65901.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 221

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 9/112 (8%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y  HF    LG F    G  +SP + +L   ++   A ++AE  R  L A+P  Q  +  
Sbjct: 75  YMAHFG---LGNF----GIHLSP-YTALLAGIAFNNAGYLAENFRGALKAIPDTQTRSGR 126

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSV 352
           +LG+T  +  RL+++PQ +R    P T+Q +  +  +SL V VG   DL  V
Sbjct: 127 SLGMTSMQTFRLIIMPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGV 178


>gi|227529142|ref|ZP_03959191.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350986|gb|EEJ41277.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 232

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 38/162 (23%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLY-------- 270
           ++T +  GL  LV+IA + ++    PVL QF     +FI G+ +  +   +Y        
Sbjct: 27  VATIIGLGLAILVVIAREKRI----PVLSQFLAILVSFIRGTPILVQLYVVYYGLPQLLV 82

Query: 271 ------------------IALSCY---TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                             IA S Y     A ++E +R+   +V  GQ EAA+++G+T  +
Sbjct: 83  LMNEWGWNTNPNGLPAIIIAFSAYGLNAMANLSESIRAAYHSVDFGQYEAALSIGMTPFR 142

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           A   +++PQ + ++IP  T+ +L+L+K+++L   +G  +++ 
Sbjct: 143 AMTQIVIPQLIINLIPNFTNIFLDLIKDTALIYNIGLVEIMG 184


>gi|300718064|ref|YP_003742867.1| octopine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299063900|emb|CAX61020.1| octopine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 239

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 47/83 (56%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  +A+   + A  AE+ R    ++P+G +EAA  +G+      R V++PQA+ + IP
Sbjct: 104 FVAGALAIGLISGAGQAEVFRGSYHSIPKGTLEAATVVGMGKWLMFRRVIVPQALTTAIP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFAD 348
            L +Q+ + +K S+L    G  +
Sbjct: 164 GLGNQWQSAIKESALVSVTGLVE 186


>gi|165976776|ref|YP_001652369.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165876877|gb|ABY69925.1| arginine transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 227

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 19/223 (8%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           PT ++   A   + +FVL ++L+   +        K  KA+   Y+  F   G P LV  
Sbjct: 14  PT-SLSLTAVSLLIAFVLAVILTFLLS-----MESKLIKAIVNGYLMLFT--GTPLLV-- 63

Query: 239 ALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             ++ L +  P  GQF +I  S     +S  +    +AL+  +AA+  ++    + A+P+
Sbjct: 64  --QFFLIYHGP--GQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPK 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E   ALGL+ R  T  +L+P A+R  +P  +++ + + K +SLA  +   D++    
Sbjct: 120 GQRETCAALGLS-RLDTLKILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYAR 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +      AI I  I   IYL  + ++ + + R+ AK+   E+
Sbjct: 179 QLYGTEYDAITIYGIAGAIYLVSTGIMTILLRRVEAKVLAFER 221


>gi|320324764|gb|EFW80838.1| amino acid ABC transporter protein, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320328871|gb|EFW84870.1| amino acid ABC transporter protein, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330890404|gb|EGH23065.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. mori str. 301020]
          Length = 216

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L CY AA+IAE  R  +  +P GQ EAA AL  +     R ++LPQA++ +
Sbjct: 86  PAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFSRGDTWRRIILPQALKPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  + + K + L   +   +L      I   T +  E   +   ++L++S+  +L
Sbjct: 146 LPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSL 205

Query: 384 FMNRLNAK 391
               L  +
Sbjct: 206 LFKYLERR 213


>gi|186476916|ref|YP_001858386.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193375|gb|ACC71340.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 237

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 60/121 (49%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A P G++EAA A G++     R V+LP A+R  +P  +++
Sbjct: 107 LAFTLNTCAYTTEIFAGAIKATPYGEIEAARAYGMSQFTLYRRVILPSALRRALPYYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + +L  +++A      D++ +   + + T ++ +   I   +YL +S  +     R   
Sbjct: 167 VILMLHATTVAFTATVPDILKIARDVNSATYRSFDAFGIAALLYLIISFALVWLFRRAER 226

Query: 391 K 391
           +
Sbjct: 227 R 227


>gi|170023780|ref|YP_001720285.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|169750314|gb|ACA67832.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
          Length = 228

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AV +GQ+EAA A G T  +  R ++ P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYMAVSKGQIEAATAFGFTSSQIFRRIMFPAMMRYALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           +  +LK ++L   +G  D+V
Sbjct: 158 WQVILKATALVSILGLNDVV 177



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + +IG +   G+LS+N+LV+ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALFSVLLSVVIGLMGAGGKLSSNRLVSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|206559443|ref|YP_002230204.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|198035481|emb|CAR51359.1| histidine transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 237

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G++     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223


>gi|110633917|ref|YP_674125.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110284901|gb|ABG62960.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chelativorans sp. BNC1]
          Length = 265

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 47/80 (58%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +  TAA+ AEI+R  + +V RGQ EAA AL  +  +  R ++LPQA+   + P  ++ 
Sbjct: 140 AFTLNTAAYQAEILRGAVESVGRGQWEAAAALAFSRWQTLRKIILPQALLVALRPYGNEI 199

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + ++K S++   +   DL+ 
Sbjct: 200 ILMIKGSAIVAIITVYDLMG 219


>gi|107022253|ref|YP_620580.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116689198|ref|YP_834821.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170732504|ref|YP_001764451.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|254245860|ref|ZP_04939181.1| Amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|105892442|gb|ABF75607.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647287|gb|ABK07928.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124870636|gb|EAY62352.1| Amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|169815746|gb|ACA90329.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 237

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G++     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223


>gi|218513115|ref|ZP_03509955.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 122

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 45/74 (60%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA    + P  ++ + L+K
Sbjct: 2   TAAYQAEILRGAIESVPHGQHEAAAALGIHKVIAFRKIVLPQAFIVALRPYGNEIILLIK 61

Query: 337 NSSLAVAVGFADLV 350
            S++   +   DL+
Sbjct: 62  GSAVVAIITVLDLM 75


>gi|85057542|ref|YP_456458.1| ABC-type amino acid transport system, permease component [Aster
           yellows witches'-broom phytoplasma AYWB]
 gi|84789647|gb|ABC65379.1| ABC-type amino acid transport system, permease component [Aster
           yellows witches'-broom phytoplasma AYWB]
          Length = 244

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 49/80 (61%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AEI+   +     GQ+EAA+ALG+T  +  + V+ PQ +R  +  ++++++  +K
Sbjct: 123 SAAYLAEIMIKNMEFFDYGQIEAALALGMTQTQTFKKVVCPQVVRKSLLRISNEFIVNIK 182

Query: 337 NSSLAVAVGFADLVSVGGTI 356
           +S +   +G  +L  V  T+
Sbjct: 183 DSCVFGVIGMNELFEVAQTV 202


>gi|171316940|ref|ZP_02906147.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097864|gb|EDT42684.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 237

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G++     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223


>gi|254690093|ref|ZP_05153347.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 6 str. 870]
 gi|254694581|ref|ZP_05156409.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|254696206|ref|ZP_05158034.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254731124|ref|ZP_05189702.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 4 str. 292]
 gi|256112283|ref|ZP_05453204.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|256258346|ref|ZP_05463882.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 9 str. C68]
 gi|260755631|ref|ZP_05867979.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260758856|ref|ZP_05871204.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260760580|ref|ZP_05872923.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884656|ref|ZP_05896270.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|261214905|ref|ZP_05929186.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|297247189|ref|ZP_06930907.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|260669174|gb|EEX56114.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260671012|gb|EEX57833.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675739|gb|EEX62560.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260874184|gb|EEX81253.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|260916512|gb|EEX83373.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|297174358|gb|EFH33705.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|326409953|gb|ADZ67018.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis M28]
 gi|326539669|gb|ADZ87884.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M5-90]
          Length = 219

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I L Y   +  P LG         +SP   +  +A++  ++ FI EI+R G
Sbjct: 62  IRGTPILVQIFLFY---YGLPALGL-------DLSP-IQAGILAIAFNSSIFITEIMRGG 110

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  +  G +EAAIALG+  +     V+LPQ    I+PPL ++    +K ++L   +   +
Sbjct: 111 LSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVITVVE 170

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 171 VLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 218


>gi|89053620|ref|YP_509071.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88863169|gb|ABD54046.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Jannaschia sp. CCS1]
          Length = 279

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 7/121 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-------FMSLYIALSCYTAA 279
           FL  G P  +   + Y+     P LG    + G  +  E       ++   I L C T+A
Sbjct: 81  FLFRGSPLFIQFFMAYEAFVMLPRLGYEFELFGIAIEAETRWFARAWLGALIVLFCNTSA 140

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI    L +VP+G +EAA A GLT     R +  P  MR   P  T++ + +   ++
Sbjct: 141 YAAEIFYGALRSVPKGDLEAADAYGLTGWTKFRRITFPTTMRLAWPAYTNEAIFMFHATA 200

Query: 340 L 340
           L
Sbjct: 201 L 201


>gi|322388157|ref|ZP_08061761.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
 gi|321140829|gb|EFX36330.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
          Length = 266

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 128 VAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTRGQVYRRVIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGG 354
            + L K +SLA + G    FA    +GG
Sbjct: 188 LIGLTKGTSLAFSAGVVEVFAQAQILGG 215


>gi|300697249|ref|YP_003747910.1| amino acid ABC transporter permease [Ralstonia solanacearum
           CFBP2957]
 gi|299073973|emb|CBJ53510.1| Amino acid ABC transporter, permease protein [Ralstonia
           solanacearum CFBP2957]
          Length = 227

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 57/104 (54%), Gaps = 11/104 (10%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+++ + +AL+   +A +AE+ R  ++++P  Q EAA +L    R     ++LPQ +R +
Sbjct: 93  PDWLKVTLALALPASAHVAELFRGAVLSIPSTQWEAAASLAFRRRDILWRIVLPQCVRRM 152

Query: 324 IPPLTSQYLNLLK----NSSLAVAVGFADLVS---VGGTIINQT 360
           +P     ++NL+      ++LA  VG  DL+    +    +N+T
Sbjct: 153 LP----SWMNLVAIITMGTALASLVGVHDLLDTAQIASNTVNRT 192



 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 18/105 (17%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
            T+ G  VGA RLS  + V  +   YV   RN+P LV+++F+             S  +P
Sbjct: 34  GTVAGLAVGALRLSPLRPVQRLAGGYVIALRNVPWLVLVYFM-------------SYAVP 80

Query: 167 FGMFLNNRGLSFP-----TLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F + L    L FP     TL +   A   V     G VLS+ +T+
Sbjct: 81  FEIELRGHVLPFPDWLKVTLALALPASAHVAELFRGAVLSIPSTQ 125


>gi|152969144|ref|YP_001334253.1| putative binding-protein-dependent transport systems inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238893600|ref|YP_002918334.1| putative binding-protein-dependent transport system inner membrane
           component [Klebsiella pneumoniae NTUH-K2044]
 gi|150953993|gb|ABR76023.1| putative binding-protein-dependent transport systems inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238545916|dbj|BAH62267.1| putative binding-protein-dependent transport system inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 213

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T+AF AEI R+     PR Q EAA ++G+      R ++LPQ     +P L ++
Sbjct: 87  VALTLNTSAFNAEIWRNAFRTFPREQREAAESVGMRRWTYFRYIMLPQMWIESLPALVNE 146

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
              L+K S     +G  DL  V   I + T + +  IL    +Y+++
Sbjct: 147 MSFLIKGSPAIAVIGVVDLTRVTNRISSVTYEPLSPILAAGLLYVAI 193


>gi|254252792|ref|ZP_04946110.1| Amino acid ABC transporter permease protein [Burkholderia dolosa
           AUO158]
 gi|124895401|gb|EAY69281.1| Amino acid ABC transporter permease protein [Burkholderia dolosa
           AUO158]
          Length = 237

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G+T     + V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMTPFTMYQRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L  +++A      D++ V     + T  A +   I   IYL++S  ++A+F
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSTTYMAFQSFGIAALIYLAVSFALVAVF 221


>gi|121606947|ref|YP_984276.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120595916|gb|ABM39355.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 218

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 68/123 (55%), Gaps = 1/123 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SPE  S+ +A+     A+  EIVR+G+ +   GQ+EAA +L L   +    V+LP 
Sbjct: 82  GVKLSPEIASM-LAMVLNLGAYACEIVRAGIESTHPGQIEAAQSLALNRWQIFTRVVLPP 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           ++  + P L SQ + ++  S++   +   ++      I ++T +++E  ++   +YL L+
Sbjct: 141 SLERVWPALVSQIIIVMLGSAVCGQISTEEISYAANLISSRTFRSMESYILVTLVYLGLA 200

Query: 379 IMI 381
           +++
Sbjct: 201 VLV 203


>gi|91782439|ref|YP_557645.1| ABC basic amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|296159043|ref|ZP_06841870.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|91686393|gb|ABE29593.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295890604|gb|EFG70395.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 237

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 1/158 (0%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+++ T++  G P  V + L Y   +   ++                +L +A +  T A+
Sbjct: 58  LVWLYTYIFRGTPLYVQLLLCYTGLYSLEIIRNHELTNAFFRDGMHCTL-LAFTLNTCAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI    + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++
Sbjct: 117 TTEIFAGAIRATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTV 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A      D++ +   + + T Q+     I   +YL +S
Sbjct: 177 AFTATVPDILKIARDVNSATYQSFNAFGIAAVLYLCIS 214


>gi|78065760|ref|YP_368529.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77966505|gb|ABB07885.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia sp. 383]
          Length = 237

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G++     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223



 Score = 36.2 bits (82), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 35/78 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S NK V+   R Y  VFR  P  V +  LY
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSTPVRFYTYVFRGTPLYVQLLLLY 79

Query: 150 KSVLSVLPIPDHSIVLPF 167
             + S+  +  HS++  F
Sbjct: 80  TGMYSLEFVRSHSLLDAF 97


>gi|224418906|ref|ZP_03656912.1| ABC transporter membrane-spanning permease - glutamine transport
           [Helicobacter canadensis MIT 98-5491]
 gi|253827859|ref|ZP_04870744.1| glutamine ABC transporter permease GlnP [Helicobacter canadensis
           MIT 98-5491]
 gi|313142420|ref|ZP_07804613.1| polar amino acid ABC transporter [Helicobacter canadensis MIT
           98-5491]
 gi|253511265|gb|EES89924.1| glutamine ABC transporter permease GlnP [Helicobacter canadensis
           MIT 98-5491]
 gi|313131451|gb|EFR49068.1| polar amino acid ABC transporter [Helicobacter canadensis MIT
           98-5491]
          Length = 222

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 32/175 (18%)

Query: 191 VFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           VFS +LG  ++L       F + L + + E + +  PLL    FL +GLP + L    Y 
Sbjct: 34  VFSILLGFFIALVQFYKVRFLSALCQAYIELS-RNTPLLIQLFFLYYGLPQVGLQLTSYT 92

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +     F+GGS                   ++AE  R+GL +V R Q+E+  +L
Sbjct: 93  CALIGVI-----FLGGS-------------------YMAESFRAGLESVGRIQLESGRSL 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           GL+  +    V+LPQ++   +P + +  + LLK +S+  A+  AD++ +   +I 
Sbjct: 129 GLSEMQLMFYVVLPQSLAVSLPFIGANAIFLLKETSVVSAIALADILYITKDLIG 183



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 33/54 (61%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           T  L+F G++ + ++G  +   +    + ++ +C+ Y+E+ RN P L+ +FFLY
Sbjct: 25  TLHLSFFGIVFSILLGFFIALVQFYKVRFLSALCQAYIELSRNTPLLIQLFFLY 78


>gi|188534298|ref|YP_001908095.1| arginine transporter permease subunit ArtM [Erwinia tasmaniensis
           Et1/99]
 gi|188029340|emb|CAO97217.1| Arginine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 222

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P +    ++ G    P   +L +ALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPAIQSIPWLWGLLSQPWLCAL-LALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            +    + A+P GQ +A  ALG+  ++  R +LLP A++  +   +++ + + K++SLA 
Sbjct: 108 LLFHGAVRAIPSGQWQACAALGMGRKEQLR-ILLPYALKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +++  G  +  +T   I +      IYL ++ ++ L M  +  +    E++
Sbjct: 167 TITLMEVMGHGQLLYGRT-YDISVFAAAGVIYLCVNGLLTLLMRLVERRALAFERR 221


>gi|325697576|gb|EGD39461.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 226

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  RSGL AV + Q E  +++GL   +    V+LPQA    +P  ++  + L+K 
Sbjct: 98  GSYMAESFRSGLEAVSQTQREVGLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +S+  AV  ADL+ V   +I    +T  A+ +++I ++ I L +S+  +    RL 
Sbjct: 158 TSVFSAVALADLMFVAKDLIGLYYETDTALLMLVIAYLIILLPISLGFSWIERRLR 213


>gi|325693721|gb|EGD35640.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK150]
          Length = 226

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  RSGL AV + Q E  +++GL   +    V+LPQA    +P  ++  + L+K 
Sbjct: 98  GSYMAESFRSGLEAVSQTQREVGLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +S+  AV  ADL+ V   +I    +T  A+ +++I ++ I L +S+  +    RL 
Sbjct: 158 TSVFSAVALADLMFVAKDLIGLYYETDTALLMLVIAYLIILLPISLGFSWIERRLR 213


>gi|319404357|emb|CBI77957.1| ABC transporter, permease protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 221

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 5/184 (2%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           KA+  L+ S F   GLP ++ +   Y       +   F+F+    +     F++  +A S
Sbjct: 40  KAIATLFSSVFR--GLPEILTLFFVYY-GLQNCIQAIFDFLNIDIIFSINAFIAGVLAFS 96

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AAF  E+  +      + Q EAA  LGL+       ++ PQ + + +P L++ +L L
Sbjct: 97  MVFAAFSCEVWLAAFKMFDKSQYEAAQVLGLSRSTTFFRIVFPQLLHNALPGLSNNWLTL 156

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK++SL   +   DL+         T + I   L+   +YL  S + +  +  L+   + 
Sbjct: 157 LKDTSLVSTISLLDLMRQTNLAATATNEPILFYLVACLLYLLFSAVSSAILRYLDKMHSS 216

Query: 395 KEKK 398
           + K+
Sbjct: 217 RNKR 220


>gi|296111386|ref|YP_003621768.1| putative amino acid ABC transporter, permease protein [Leuconostoc
           kimchii IMSNU 11154]
 gi|295832918|gb|ADG40799.1| putative amino acid ABC transporter, permease protein [Leuconostoc
           kimchii IMSNU 11154]
          Length = 239

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 43/68 (63%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S    A ++E+ RS ++ V  GQ EAA+ +GL+  +    +++PQA+ S IP + +  LN
Sbjct: 108 SLIAVANLSEVFRSAILTVDSGQQEAAVMVGLSPLQTYYRIIVPQALVSAIPNIGNLTLN 167

Query: 334 LLKNSSLA 341
           +LK +SLA
Sbjct: 168 ILKGTSLA 175


>gi|255261825|ref|ZP_05341167.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
 gi|255104160|gb|EET46834.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
          Length = 268

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 45/94 (47%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  ++   + L C TAA+  EI    L ++PRG +EAA A GLT     + V+ P  +R 
Sbjct: 113 SAAWLGALVVLFCNTAAYSGEIFYGALQSIPRGDIEAADAYGLTGWTRFKRVVWPTLLRL 172

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
             P  T++ + L   ++L    GF      G  +
Sbjct: 173 AWPAYTNEAIFLFHATTLVFFTGFPAWQQRGDAL 206


>gi|197295287|ref|YP_002153828.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944766|emb|CAR57371.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 244

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 8/142 (5%)

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A++  L     V G F F         F+   ++L     A++ +I+R+ L+ VP GQ+E
Sbjct: 88  AIENALRGSGIVAGDFAF-------DPFVVAALSLGFIQGAYLTDILRAALVNVPVGQIE 140

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTII 357
           AA A G+T  +    + LP A R  +P + + +LN  K++S    +G F DL+       
Sbjct: 141 AAHAYGMTPWQTFTRIRLPAAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAA 200

Query: 358 NQTGQAIEIILIWMFIYLSLSI 379
             T   +   L+   ++L LSI
Sbjct: 201 GATRHYVFFYLVTAALFLLLSI 222


>gi|166032311|ref|ZP_02235140.1| hypothetical protein DORFOR_02014 [Dorea formicigenerans ATCC
           27755]
 gi|166028034|gb|EDR46791.1| hypothetical protein DORFOR_02014 [Dorea formicigenerans ATCC
           27755]
          Length = 219

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 7/120 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIG------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           ++A+  +L  + P+L Q  FI       G    P+   +   L+    +++AE  RSGL 
Sbjct: 52  IVAVYIELSRNTPLLVQLFFIYYGLPKIGIQTDPQTCGI-AGLTFLGGSYMAEAFRSGLE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V   Q E+A++LG+   +  R V+LPQA    +P   +  + LLK +S+  AV   DL+
Sbjct: 111 TVAAIQTESALSLGMNRLQVMRYVVLPQAFSISVPAFMANVIFLLKETSVFSAVSLMDLM 170


>gi|66046195|ref|YP_236036.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256902|gb|AAY37998.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 216

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ ++P L + 
Sbjct: 93  IGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFNRSDTWRRIILPQALKPMLPVLGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K + L   +   +L      I   T +  E   +   ++L++S+  +L    L  
Sbjct: 153 LIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLER 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|160880804|ref|YP_001559772.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium phytofermentans ISDg]
 gi|160429470|gb|ABX43033.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium phytofermentans ISDg]
          Length = 226

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 33/193 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           +TM  +    V + ++G++ SL  T      +   + + +  +  PLL    FL FGLP 
Sbjct: 19  MTMKISLIGIVLAILIGLICSLIKTLRIPILKSLVNIYIEISRNTPLLIQLFFLYFGLPK 78

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +                       G  +S E  ++ I L+    +++AE  R+G+  V  
Sbjct: 79  V-----------------------GIVLSSESCAI-IGLAFQGGSYMAEAFRTGIENVAP 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q E+ ++LG T R+    ++LPQA+ + +P   +  + ++K +S+  AV  ADL+ V  
Sbjct: 115 IQTESGLSLGFTKRQVYFHIVLPQAIATSVPVFCANIIFMIKETSVFSAVALADLMFVAK 174

Query: 355 TIIN---QTGQAI 364
            +I    +T +A+
Sbjct: 175 DLIGIYYKTDEAL 187


>gi|260425455|ref|ZP_05779435.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
 gi|260423395|gb|EEX16645.1| binding-protein-dependent transport systems inner membrane
           component [Citreicella sp. SE45]
          Length = 293

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G++HR+    +L+PQ     +P L++ ++ L+K 
Sbjct: 153 GAFAANVLYGAMRAVPRAQIETAEAYGMSHRQTFWRILIPQMWVYALPGLSNLWMVLVKA 212

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 213 TPLLFLLGVEDIV 225


>gi|330969959|gb|EGH70025.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 216

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ ++P L + 
Sbjct: 93  IGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFNRSDTWRRIILPQALKPMLPVLGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K + L   +   +L      I   T +  E   +   ++L++S+  +L    L  
Sbjct: 153 LIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLER 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|260575755|ref|ZP_05843752.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
 gi|259022153|gb|EEW25452.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sp. SW2]
          Length = 293

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 22/170 (12%)

Query: 246 FDKPVLGQFNF-------IGGSTVSPEFMSLY------IALSCYTAAFIAEIVRSGLIAV 292
           +D+PV     F       +  +T SP     Y      I  +    AF+  ++   + AV
Sbjct: 108 WDQPVFQGLEFHVCPAAKVPVATASPFVFQAYGFGLAVITFAIVFGAFVTNVLYGAMQAV 167

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-- 350
           PR Q+E A + G++H +  R +L+PQ     +P L + ++ L+K + L   +G  D+V  
Sbjct: 168 PRAQLETAESYGMSHGQVFRRILVPQMWTYALPGLANLWMILIKATPLLFLLGVKDIVYY 227

Query: 351 --SVGGTIINQTGQAIEIILIWMFI-----YLSLSIMIALFMNRLNAKIA 393
              +GGT             I+ F+     YL ++ +  + + RL+A+++
Sbjct: 228 ARELGGTKTQAYDYPHPDWRIFYFLGLLVFYLLMTKVSEVVLGRLSARLS 277


>gi|92112290|ref|YP_572218.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795380|gb|ABE57519.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 213

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 34/183 (18%)

Query: 195 VLGIVLSLFATRLSR--------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           V G+V++L   RL+R          +    +A PL+ ++ F+    P L        L  
Sbjct: 29  VAGLVIALI--RLARIPIVDQLLVLYISVARATPLVTLALFIFLSAPDL-------GLDL 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           ++ V G                  +AL+  T AF AEI RS      R Q EAA+A G+T
Sbjct: 80  NRSVAG-----------------ILALTLNTTAFNAEIWRSAFRNFSRDQREAAMATGMT 122

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++LPQ + + +P L ++   L+K S     +G  DL  V   I   T + +  
Sbjct: 123 PWITFRRIMLPQMVITSLPGLVNEMSFLIKGSPAIAVIGIVDLTRVTNRISAVTYEPLPP 182

Query: 367 ILI 369
           IL+
Sbjct: 183 ILV 185


>gi|255024981|ref|ZP_05296967.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J1-208]
          Length = 100

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 51/82 (62%)

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           MEAA +LG+T   + R ++LPQA+++I+P L ++++ ++K SS+   +G  +L+ + G +
Sbjct: 1   MEAARSLGMTQGASMRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVV 60

Query: 357 INQTGQAIEIILIWMFIYLSLS 378
              + +    ++I   IY  L+
Sbjct: 61  QGASFKPFIPLIITSLIYFVLT 82


>gi|13488461|ref|NP_109468.1| ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14028215|dbj|BAB54807.1| ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 232

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L   T  + ++ VR+GL ++P GQ EA +ALGL+      L+ LPQA+ ++ P   + 
Sbjct: 101 LVLGLNTGGYASQAVRAGLQSLPAGQREAGMALGLSRPAILLLIELPQALVTMSPTFINN 160

Query: 331 YLNLLKNSSLAVAVGFADL 349
            + L+K +SL   V   D+
Sbjct: 161 LIQLVKATSLVSLVTLTDM 179


>gi|327459024|gb|EGF05372.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 229

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  RSGL AV + Q E  +++GL   +    V+LPQA    +P  ++  + L+K 
Sbjct: 101 GSYMAESFRSGLEAVSQTQREVGLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKE 160

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNRLN 389
           +S+  AV  ADL+ V   +I    +T  A+ +++I ++ I L +S+  +    RL 
Sbjct: 161 TSVFSAVALADLMFVAKDLIGLYYETDTALLMLVIAYLIILLPISLGFSWIERRLR 216


>gi|304393287|ref|ZP_07375215.1| octopine transport system permease protein OccQ [Ahrensia sp.
           R2A130]
 gi|303294294|gb|EFL88666.1| octopine transport system permease protein OccQ [Ahrensia sp.
           R2A130]
          Length = 240

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 4/161 (2%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIA-LSCYTAA 279
           L I T LI  +P LVLI L Y       +L Q F  +G   V    ++  IA L     A
Sbjct: 58  LEIYTTLIRAVPELVLILLLY--FAGTQLLSQAFMAMGYGRVDISGLAAGIAVLGFVQGA 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E++R  ++A+P+G++EA  + G+   K    +++P  +   +P L + +L + K+++
Sbjct: 116 YSTEVMRGAILAIPKGEVEAGASFGMGSFKIFHRIMIPAMLPLALPGLANLWLIITKDTA 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           L   VG+ +L  V       T   +E  ++   IYL+++++
Sbjct: 176 LLAVVGYEELALVTRQAAGATRYYLEAYIVAGAIYLAVTLV 216


>gi|294678297|ref|YP_003578912.1| polar amino acid ABC transporter permease HisM [Rhodobacter
           capsulatus SB 1003]
 gi|294477117|gb|ADE86505.1| polar amino acid ABC transporter, permease protein HisM
           [Rhodobacter capsulatus SB 1003]
          Length = 277

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI    L+AVP+G +EAA A GLT  +  R +L P  +R   P  T++ + L  
Sbjct: 136 TSAYSAEIFHGALMAVPKGDIEAADAYGLTGWQKFRRILWPTTLRLAWPAYTNEAIFLFH 195

Query: 337 NSSLAVAVGFADLVSVGGTI 356
            +++    GF      G  +
Sbjct: 196 ATTIVFFSGFPAYQQRGDAL 215


>gi|195978682|ref|YP_002123926.1| amino-acid ABC transporter permease protein [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|225867998|ref|YP_002743946.1| ABC transporter permease protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|195975387|gb|ACG62913.1| amino-acid ABC transporter permease protein [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|225701274|emb|CAW98258.1| ABC transporter permease protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 267

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 8/128 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ + +V  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAIQSVDAGEIEAAKSLGMTSVQVYRRVIIPNAAVVATPTLINGL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG       + I + L    +Y  +SI+I      
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGADYRYFERYISVAL----VYWGISILIEQAGRL 245

Query: 388 LNAKIALK 395
           +  K+A+K
Sbjct: 246 IEYKMAIK 253


>gi|293396873|ref|ZP_06641147.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291420344|gb|EFE93599.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 222

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 13/181 (7%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLTM       + S +L ++L+L           K     PL+ I   L  G P LV I 
Sbjct: 17  TLTMAALVVALILSLLLTVILTL-----------KIPVLTPLVKIYITLFTGTPLLVQIF 65

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L Y      P +  + ++  S +S  ++   IAL+  +AA+  ++    + A+P GQ ++
Sbjct: 66  LIYYGPGQFPAIRDYPWLW-SLLSQPWLCAMIALALNSAAYTTQLFYGAVRAIPAGQWQS 124

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             ALG++ R+  R +LLP A +  +   +++ + + K++SLA  +   +++     +  +
Sbjct: 125 CEALGMSRRQTLR-ILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLMYGR 183

Query: 360 T 360
           T
Sbjct: 184 T 184


>gi|254455264|ref|ZP_05068693.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082266|gb|EDZ59692.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
          Length = 230

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 9/171 (5%)

Query: 226 TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T +I G+P L++I L +      + +   + G + +I  +     F++  +A+   + A+
Sbjct: 59  TTVIRGVPELLVIYLFFFGGSGAIMYVASIFGYYEYIEINA----FITGSLAIGIISGAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E+ R  + ++ +GQ EAA  LG++       ++LPQ +R  IP L++ +   LK++SL
Sbjct: 115 STEVFRGAIQSIDKGQFEAAKVLGVSKFAQFYKIILPQMLRLAIPNLSNVWQITLKDTSL 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               G  +++         T   +        +YLSL+ +    +N+L  K
Sbjct: 175 ISVTGLVEIMRQSYIAAGSTRDPLFFYSFAAVLYLSLTYLSMKLINKLEVK 225


>gi|146305346|ref|YP_001185811.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145573547|gb|ABP83079.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 221

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 72/133 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +  +A+     A+  EI+R+G+ A+P GQ+EAA AL ++  +  R V+L  A+  + 
Sbjct: 89  EWEAAVLAMVINLGAYSTEIIRAGIQAIPHGQLEAAAALAMSRFETFRHVVLRPALGKVW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L+SQ + ++  S++   +   +L      I ++  +A E  L+   +YL ++I+I   
Sbjct: 149 PALSSQIIIVMLGSAVCSQISTEELSFAANFIQSRNFRAFETYLLTTALYLLMAILIRQL 208

Query: 385 MNRLNAKIALKEK 397
           +  +  +  + E+
Sbjct: 209 LAWVGRRFIMGER 221


>gi|126462780|ref|YP_001043894.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126104444|gb|ABN77122.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 275

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI    L+A+P+G +EAA A GL+  K  R +  P  +R   P  T++ + L  
Sbjct: 134 TAAYSAEIFHGALMAIPKGDLEAADAYGLSGWKKFRRIQWPTMLRLAWPAYTNEAIFLFH 193

Query: 337 NSSLAVAVGFADLVSVGGTI 356
            ++L    GF      G  +
Sbjct: 194 ATTLVFFSGFPAFQQRGDAL 213


>gi|186476548|ref|YP_001858018.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193007|gb|ACC70972.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 237

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 62/115 (53%), Gaps = 1/115 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A P G++EAA A G++     R +++P A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRATPHGEVEAARAYGMSWLTMYRRIVIPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
            + +L  +++A      D++ V     + T ++ E   +   IYL++S  ++ALF
Sbjct: 167 VILMLHATTVAFTATVPDVLKVARDANSATYRSFEAFGLAALIYLAVSFALVALF 221


>gi|254461456|ref|ZP_05074872.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206678045|gb|EDZ42532.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 269

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L C TAA+  EI    L ++P+G +EAA A GLT     + ++ P  +R   P  T++
Sbjct: 122 IVLFCNTAAYTGEIFYGALRSIPKGDVEAADAYGLTGWPRFKRIIWPTMLRLAWPAYTNE 181

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTI 356
            + L   ++L    GF      G  +
Sbjct: 182 AIFLFHATTLVFFTGFPAWQQRGDAL 207


>gi|254489632|ref|ZP_05102834.1| nopaline ABC transporter, permease protein [Roseobacter sp. GAI101]
 gi|214041802|gb|EEB82443.1| nopaline ABC transporter, permease protein [Roseobacter sp. GAI101]
          Length = 221

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 2/116 (1%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+ LI++P GQ EA   LGL   +    ++ PQ +   +P + +Q+L  LK S+L  
Sbjct: 106 EILRAALISIPAGQREAGQVLGLKRHQVFSRIIFPQMLMRALPGIGNQWLISLKESALVS 165

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            VG  +L+         T + +   L+   IY++++  I+ F+ R  A++ L   K
Sbjct: 166 VVGLEELMRHSVIAAGATREPMVFYLLAALIYVAIT-GISTFLLR-QAELRLSSGK 219


>gi|311104487|ref|YP_003977340.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 5 [Achromobacter
           xylosoxidans A8]
 gi|310759176|gb|ADP14625.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 5
           [Achromobacter xylosoxidans A8]
          Length = 237

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 51/86 (59%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FM+   AL     A++A+++RS +  VP GQ EAA  L +        V+LPQ +R  +P
Sbjct: 95  FMAAVAALGMVYGAYLADLIRSAIQNVPHGQFEAARVLLVPRTTIWLKVILPQMLRLALP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
            +T+ ++ +LK+++L   +G  ++++
Sbjct: 155 GMTNMWIVVLKDTALISLIGLKEIMA 180


>gi|260467393|ref|ZP_05813565.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259028853|gb|EEW30157.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 237

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L   T  + ++ VR+GL ++P GQ EA +ALGL+      L+ LPQA+ ++ P   + 
Sbjct: 106 LVLGLNTGGYASQAVRAGLQSLPAGQREAGMALGLSRPAILLLIELPQALVAMSPTFVNN 165

Query: 331 YLNLLKNSSLAVAVGFADL 349
            + L+K +SL   V   D+
Sbjct: 166 LIQLVKATSLVSLVTLTDM 184


>gi|170749709|ref|YP_001755969.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170656231|gb|ACB25286.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 283

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 6/152 (3%)

Query: 216 GKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           G+ LP L + +T +   +P LVL+   + + F  P   Q    G     P+++      S
Sbjct: 104 GRILPRLAWCATQVFRNVPWLVLL---FFVMFLVPF--QVTVFGVRVPLPDWVKATFGFS 158

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A +AEIVR  + +VP  Q EAA +L  T R+    ++LPQ  + ++PP  + Y  +
Sbjct: 159 LPVMANVAEIVRGAVRSVPNTQWEAAESLAFTRRQTLWRIILPQCAKRMLPPWMNVYSLI 218

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              +  A  VG  +++++   +    G   E+
Sbjct: 219 AMATVQASIVGVTEMLTLTAQVHAAEGGRPEL 250


>gi|330939241|gb|EGH42644.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 216

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ +
Sbjct: 86  PAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  + + K + L   +   +L      I   T +  E   +   ++L++S+  +L
Sbjct: 146 LPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSL 205

Query: 384 FMNRLNAK 391
               L  +
Sbjct: 206 LFKYLERR 213


>gi|289672940|ref|ZP_06493830.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 216

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ +
Sbjct: 86  PAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  + + K + L   +   +L      I   T +  E   +   ++L++S+  +L
Sbjct: 146 LPVLGNYLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSL 205

Query: 384 FMNRLNAK 391
               L  +
Sbjct: 206 LFKYLERR 213


>gi|123441811|ref|YP_001005795.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332162246|ref|YP_004298823.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|122088772|emb|CAL11578.1| arginine transport system permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|318606309|emb|CBY27807.1| arginine ABC transporter, permease protein ArtM [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666476|gb|ADZ43120.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860381|emb|CBX70691.1| arginine transport system permease protein artM [Yersinia
           enterocolitica W22703]
          Length = 222

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 7/187 (3%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT  A PL+ I   L  G P LV I L Y      P + ++ ++      P   ++ IAL
Sbjct: 40  KTPIATPLVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLWNLLSQPWLCAM-IAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++  ++ R +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPAGQWQSCEALGMSKAQSLR-ILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNAK 391
           + K++SLA  +    L+ V G      G+  ++++      +YL ++ ++ LFM  +  +
Sbjct: 158 VFKSTSLAYTI---TLMEVMGYSQLMYGRTYDVMVFGAAGLVYLVVNGLLTLFMRVVERR 214

Query: 392 IALKEKK 398
               E++
Sbjct: 215 ALAFERR 221


>gi|119944194|ref|YP_941874.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119862798|gb|ABM02275.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 216

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    AF +EI R+ L      Q+EAA A G++  K   L++ PQ  R+ + PLTS+
Sbjct: 87  LVLTLNLTAFSSEIWRAALDNFSSEQLEAAEAYGMSRIKTFWLIIFPQLWRANLGPLTSE 146

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              L+K +     +G  ++      I  QT   +   L+ M +Y    ++I      L  
Sbjct: 147 ITILIKGTPAVAVIGVVEITRAASRIGAQTYDPLPPFLMAMILYTLFVVIIVKSQRLLEK 206

Query: 391 KIALKEK 397
           K+  K K
Sbjct: 207 KMTKKYK 213


>gi|77463946|ref|YP_353450.1| ABC basic amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|221639802|ref|YP_002526064.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|77388364|gb|ABA79549.1| ABC basic amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|221160583|gb|ACM01563.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 275

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI    L+A+P+G +EAA A GL+  K  R +  P  +R   P  T++ + L  
Sbjct: 134 TAAYSAEIFHGALMAIPKGDLEAADAYGLSGWKKFRRIQWPTMLRLAWPAYTNEAIFLFH 193

Query: 337 NSSLAVAVGFADLVSVGGTI 356
            ++L    GF      G  +
Sbjct: 194 ATTLVFFSGFPAFQQRGDAL 213


>gi|329998469|ref|ZP_08303106.1| arginine ABC transporter permease protein ArtM [Klebsiella sp. MS
           92-3]
 gi|328538659|gb|EGF64755.1| arginine ABC transporter permease protein ArtM [Klebsiella sp. MS
           92-3]
          Length = 222

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++ ++      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQEYPWLWHLISEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPDGQWQSCSALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGQGQLLYGRT 184


>gi|238893922|ref|YP_002918656.1| arginine transporter permease subunit ArtM [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238546238|dbj|BAH62589.1| arginine 3rd transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 222

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++ ++      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQEYPWLWHLISEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPDGQWQSCSALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGHGQLLYGRT 184


>gi|283784628|ref|YP_003364493.1| arginine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282948082|emb|CBG87647.1| arginine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 222

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 9/180 (5%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL--YISTFLIFGLPTLVLIAL 240
           + T+  + V S V+ ++LSL  T +      KT   + L+  YI+ F   G P LV I L
Sbjct: 12  LHTSLTLTVASIVVALILSLIFTII---LTLKTPGVVWLVRGYITLFT--GTPLLVQIFL 66

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y      P L ++  +      P   +L IALS  +AA+  ++    + A+P GQ ++ 
Sbjct: 67  IYYGPGQFPTLQEYPVLWHLLSEPWLCAL-IALSLNSAAYTTQLFYGAIRAIPEGQWQSC 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG++ +K T  +LLP A +  +   +++ + + K++SLA  +   +++  G  +  +T
Sbjct: 126 GALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYGQLLYGRT 184


>gi|206580174|ref|YP_002239815.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|262041363|ref|ZP_06014569.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|288936653|ref|YP_003440712.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510295|ref|ZP_06549665.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|330007453|ref|ZP_08305952.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|206569232|gb|ACI11008.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|259041286|gb|EEW42351.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|288891362|gb|ADC59680.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777011|gb|EFD85009.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|328535464|gb|EGF61932.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 213

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 50/98 (51%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T+AF AEI R+     PR Q EAA ++G+      R ++LPQ     +P L ++
Sbjct: 87  VALTLNTSAFNAEIWRNAFRTFPREQREAAESVGMRRWTYFRYIMLPQMWIESLPALVNE 146

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              L+K S     +G  DL  V   I + T + +  IL
Sbjct: 147 MSFLIKGSPAIAVIGVVDLTRVTNRISSVTYEPLSPIL 184


>gi|325277398|ref|ZP_08143018.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324097471|gb|EGB95697.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 221

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 67/117 (57%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +  +A+     A+  EI+R+G+ A+P+GQ+EAA AL ++  +A R V+L  A+  + 
Sbjct: 89  EWQAAVLAMVINLGAYSTEIIRAGIQAIPKGQLEAAAALAMSRAEAFRHVVLQPALAKVW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P L+SQ + ++  S++   +   +L      I ++  +A E  L+   +YL ++I +
Sbjct: 149 PALSSQIVIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYLLTTGLYLIMAIAV 205


>gi|114764421|ref|ZP_01443647.1| putative transport system permease abc transporter protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114543175|gb|EAU46193.1| putative transport system permease abc transporter protein
           [Roseovarius sp. HTCC2601]
          Length = 239

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 22/203 (10%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG    L+  R+ R   E          I T LI  +P LVL+ L Y +  D  +L Q 
Sbjct: 44  LLGATAKLYGGRVLRDIAE----------IYTLLIRAVPELVLMLLFYYVGTD--LLNQL 91

Query: 255 -NFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               G   +  + +S  I  +      +  E+ R  + AVP GQ+EAA A G++  +  R
Sbjct: 92  MAAFGREGIDIDGLSAGILVIGLVQGGYATEVFRGAIRAVPPGQIEAAQAFGMSPFRVLR 151

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V LP      +P + + ++   K+++L   +GF++L  V      Q   A     ++ F
Sbjct: 152 RVTLPAMAPHALPGMANLWMIATKDTALLAVIGFSELTLV----TKQAAAATREYFLFFF 207

Query: 373 ----IYLSLSIMIALFMNRLNAK 391
               +YL+L+++  L +  L  +
Sbjct: 208 AAGLLYLALTLISNLGLRWLERR 230



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           ID  ++  TS   +  A+L GF+ +  LA  G +   +IG L    +L   +++  I  +
Sbjct: 5   IDFSLLALTS-PGWGGALLAGFLRSVELAAGGYLLGIVIGLLGATAKLYGGRVLRDIAEI 63

Query: 132 YVEVFRNIPPLVVIFFLY 149
           Y  + R +P LV++   Y
Sbjct: 64  YTLLIRAVPELVLMLLFY 81


>gi|322513410|ref|ZP_08066526.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
 gi|322120798|gb|EFX92668.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
          Length = 156

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 25/132 (18%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            RL+R + E + +  P L    FL +GLP    I +K+                      
Sbjct: 50  NRLARGYIELS-RNTPQLIQLFFLYYGLPK---IGIKWD--------------------- 84

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F    IAL     +++AE +R+GL+ VP+GQ EAA A+GL   +    V+ PQA    I
Sbjct: 85  GFTCGIIALVFLGTSYMAEALRAGLLTVPKGQTEAAKAIGLNRFQVFPYVIFPQAWAVSI 144

Query: 325 PPLTSQYLNLLK 336
           P + +  L L+K
Sbjct: 145 PAIGANVLFLIK 156


>gi|315640930|ref|ZP_07896026.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483348|gb|EFU73848.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 236

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 7/176 (3%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S V+GI   L    L+R +  K     P   +   L+ G+P +VLI L   L   K    
Sbjct: 29  SLVIGIFFGLLIA-LARQYKIKV--IAPFFQVFITLLKGIP-IVLIILASYLIASKKFDD 84

Query: 253 QFNFIGGSTVSPEFMSLYIA---LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               +  S    +F  ++IA   LS  +    +EI R    ++ +GQ +AA +LG+T  +
Sbjct: 85  LAEAMHWSVRFKDFNMIWIAIFALSILSIINSSEIFRGAFSSIKKGQFDAAKSLGMTSFQ 144

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             R VLLPQA    +P  ++  + L+K S+LA  V   D+ +       Q  + +E
Sbjct: 145 TIRRVLLPQAFPVSVPMFSNLLITLIKASALASMVSVVDVFAAAKISAQQNYRFLE 200


>gi|296162372|ref|ZP_06845165.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. Ch1-1]
 gi|295887405|gb|EFG67230.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. Ch1-1]
          Length = 241

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  + L     ++++E+ R+G  +VP GQ EA++ LG +       V LPQA+  +
Sbjct: 85  PALAAGVLVLGLNEGSYLSEVFRAGFASVPAGQREASLTLGFSAAYRFFCVTLPQALPVM 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL 349
           IPP  +  + +LK SSL   V   DL
Sbjct: 145 IPPFGNALIVMLKFSSLVSLVTIRDL 170


>gi|260912991|ref|ZP_05919476.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260632981|gb|EEX51147.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 227

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 13/180 (7%)

Query: 224 ISTFLIF--GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV----SPEFMSLYIALSCYT 277
           I+T+L    G P LV    ++ L +  P  GQF+ I  S V    S  +    + L+  +
Sbjct: 49  INTYLTLFTGTPLLV----QFFLIYAGP--GQFDVIVQSPVWSLLSNAWFCAMLTLALNS 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  ++    + A+ +GQ E+  +LGLT R  T  +L+P A++  +P  +++ + + K 
Sbjct: 103 AAYTTQLFHGAVKAISKGQWESCASLGLT-RLQTLKILIPYALKRALPSYSNEIILVFKG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++LA  +   D++     +      A+ I  I   IYL ++ +  + + +L +++   E+
Sbjct: 162 TALASTITIMDIMGYARQLYGTEYDALTIYGIAGAIYLVITGIATVLLRKLESRVLSFER 221


>gi|300172351|ref|YP_003771516.1| L-cystine permease [Leuconostoc gasicomitatum LMG 18811]
 gi|299886729|emb|CBL90697.1| L-cystine permease protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 234

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 4/126 (3%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS      ++E  R    +V + Q +AA +LG+T  +  R VL+PQ M   +P + + 
Sbjct: 106 IGLSLMATVGLSEAFRGAFESVKQVQFDAARSLGMTQLQTIRRVLIPQTMPVALPMIINM 165

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI---ALFMN- 386
           ++NL+K +++A  V   ++ S      +   +  E  +    IY  ++I+I   A+F+  
Sbjct: 166 FINLIKGTAIASLVSVVEIFSAATQAASSNYKYFEAYIAAALIYWMMTIVIERGAVFLEV 225

Query: 387 RLNAKI 392
           R++ KI
Sbjct: 226 RMDKKI 231


>gi|270293028|ref|ZP_06199239.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279007|gb|EFA24853.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 266

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 128 VAFAFNEAAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGG 354
            + L K +SLA + G    FA    +GG
Sbjct: 188 LIGLTKGTSLAFSAGVVEVFAQAQILGG 215


>gi|123441654|ref|YP_001005638.1| histidine transport system permease protein HisQ [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088615|emb|CAL11410.1| histidine transport system permease protein HisQ [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 228

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVP GQ+EAA A G +  +  R ++ P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYMAVPTGQIEAARAFGFSSSQIFRRIMFPAMMRYALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           +  +LK ++L   +G  D+V         T Q     L+   +YL   +LS  I L++ R
Sbjct: 158 WQVILKATALVSILGLNDVVKATQLAGKGTYQPFFFALVAGVVYLIFTTLSNGILLWLER 217



 Score = 38.9 bits (89), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + IIG +   G+LS+N+L++ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLSSNRLLSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLYKSVLSVL 156
           V++  ++  +  VL
Sbjct: 63  VLMLLIFYGLQIVL 76


>gi|84516446|ref|ZP_01003805.1| ABC transporter, permease protein, HisMQ family [Loktanella
           vestfoldensis SKA53]
 gi|84509482|gb|EAQ05940.1| ABC transporter, permease protein, HisMQ family [Loktanella
           vestfoldensis SKA53]
          Length = 284

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPRGQ+E A A G++ R+    VL+PQ     +P L++ ++ L+K 
Sbjct: 143 GAFAANVLFGAMRAVPRGQLETAEAYGMSQRQTFWRVLVPQMWVYALPGLSNLWMVLIKA 202

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 203 TPLLFLLGIQDIV 215


>gi|167034162|ref|YP_001669393.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860650|gb|ABY99057.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 244

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 66/125 (52%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G +     F  + + +S +  AF AE +R+G+ AVP   +EAA +L  + R+    V L
Sbjct: 102 LGNANPMTPFAWVVLVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFSRRQQLLQVQL 161

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A+R  +P L +  ++L+K +++A A+   D+      I  Q    IE++++ +  Y  
Sbjct: 162 PLAVRFALPALVNNLIDLVKMTAVASAIAVNDITYASIMIWTQGDNVIELMILILAFYGL 221

Query: 377 LSIMI 381
           LS  +
Sbjct: 222 LSFAV 226


>gi|331266688|ref|YP_004326318.1| ABC transporter membrane-spanning permease-amino acid transport
           system (aspartate/glutamate transport, putative)
           [Streptococcus oralis Uo5]
 gi|326683360|emb|CBZ00978.1| ABC transporter membrane-spanning permease-amino acid transport
           system (aspartate/glutamate transport, putative)
           [Streptococcus oralis Uo5]
          Length = 266

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 128 VAFAFNEAAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGG 354
            + L K +SLA + G    FA    +GG
Sbjct: 188 LIGLTKGTSLAFSAGVVEVFAQAQILGG 215


>gi|332162410|ref|YP_004298987.1| histidine transport system permease protein HisQ [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606495|emb|CBY27993.1| histidine ABC transporter, permease protein HisQ [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666640|gb|ADZ43284.1| histidine transport system permease protein HisQ [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863722|emb|CBX73823.1| histidine transport system permease protein hisQ [Yersinia
           enterocolitica W22703]
          Length = 228

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVP GQ+EAA A G +  +  R ++ P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYMAVPTGQIEAARAFGFSSSQIFRRIMFPAMMRYALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL---SLSIMIALFMNR 387
           +  +LK ++L   +G  D+V         T Q     L+   +YL   +LS  I L++ R
Sbjct: 158 WQVILKATALVSILGLNDVVKATQLAGKGTYQPFFFALVAGVVYLIFTTLSNGILLWLER 217



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + IIG +   G+LS+N+L++ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLSSNRLLSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLYKSVLSVL 156
           V++  ++  +  VL
Sbjct: 63  VLMLLIFYGLQIVL 76


>gi|241205010|ref|YP_002976106.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858900|gb|ACS56567.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 276

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  TAA+ AEI+R  + +V  GQ EAA ALG+    A R ++LPQA+   + P  ++ 
Sbjct: 151 AMTINTAAYQAEILRGAIESVSHGQHEAAAALGIHKFIAFRKIILPQALIVALRPYGNEI 210

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + L+K S++   +   DL+ 
Sbjct: 211 ILLIKGSAVVAIITVLDLMG 230


>gi|315612885|ref|ZP_07887796.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315314995|gb|EFU63036.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 266

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 128 VAFAFNEAAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGG 354
            + L K +SLA + G    FA    +GG
Sbjct: 188 LIGLTKGTSLAFSAGVVEVFAQAQILGG 215


>gi|152969451|ref|YP_001334560.1| arginine transporter permease subunit ArtM [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|262041042|ref|ZP_06014261.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|150954300|gb|ABR76330.1| arginine 3rd transport system permease protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|259041600|gb|EEW42652.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 222

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++ ++      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQEYPWLWHLISEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPDGQWQSCSALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGHGQLLYGRT 184


>gi|146311035|ref|YP_001176109.1| arginine transporter permease subunit ArtM [Enterobacter sp. 638]
 gi|145317911|gb|ABP60058.1| L-arginine ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 222

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  I      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPTLQEYPVIWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGHGQLLYGRT 184


>gi|320184060|gb|EFW58880.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella flexneri CDC 796-83]
 gi|332098840|gb|EGJ03797.1| general L-amino acid transport system permease protein aapQ domain
           protein [Shigella boydii 3594-74]
          Length = 117

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 47/93 (50%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    
Sbjct: 25  QILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVF 84

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           +VG +NT  ++   ++ A+++G  +G  RLS N
Sbjct: 85  IVGLLNTLLVSALCIVFASVLGFFIGLTRLSDN 117


>gi|157371562|ref|YP_001479551.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157323326|gb|ABV42423.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 228

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 2/127 (1%)

Query: 226 TFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI G+P LVL+ L  Y L      L +        + P    + I L     A+  E 
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQIALNNLTELLGFAQIDIDPLSAGI-ITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AV +GQ+EAA A G T  +  R +L P  MR  +P + + +  +LK ++L   +
Sbjct: 112 FRGAYMAVSKGQIEAATAYGFTGSQIFRRILFPAMMRFALPGIGNNWQVILKATALVSIL 171

Query: 345 GFADLVS 351
           G  D+V 
Sbjct: 172 GLNDVVK 178


>gi|146276916|ref|YP_001167075.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555157|gb|ABP69770.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 275

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI    L+A+P+G +EAA A GL+  K  R +  P  +R   P  T++ + L  
Sbjct: 134 TAAYSAEIFHGALMAIPKGDLEAADAYGLSGWKKFRRIQWPTMLRLAWPAYTNEAIFLFH 193

Query: 337 NSSLAVAVGFADLVSVGGTI 356
            ++L    GF      G  +
Sbjct: 194 ATTLVFFSGFPAFQQRGDAL 213


>gi|239833765|ref|ZP_04682093.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Ochrobactrum intermedium LMG 3301]
 gi|239821828|gb|EEQ93397.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Ochrobactrum intermedium LMG 3301]
          Length = 242

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 62/115 (53%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+VR  L AVP  Q EAA AL  +       V+LPQA+  ++P   +  ++ LK+
Sbjct: 118 GAYGAEVVRGALQAVPEAQHEAARALNFSKGHTLFHVILPQAVVEMMPAFGNLAIHNLKD 177

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++LA  +  +DL      + N T  ++ I  + +  Y +++++++  +  L  ++
Sbjct: 178 TALASLIAISDLTFQAQRLRNLTLDSVTIYSLTLLGYFAMALVLSAAIRWLERRL 232



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG    Q    Y   + Y  A+  G   T  LA S M   TI+    G  R +   +++ 
Sbjct: 12  AGIVSSQSGDDYMHWTEYLPALFKGAQITAILALSSMAIGTILAFSAGIARFAGGPILST 71

Query: 128 ICRVYVEVFRNIPPLVVIFFLY 149
           I  +Y+E+FR    LV +F+LY
Sbjct: 72  IAVIYIEIFRGTSLLVQLFWLY 93


>gi|251788813|ref|YP_003003534.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537434|gb|ACT06055.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 233

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 14/126 (11%)

Query: 227 FLIF---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           FL+F   G+P L+ + L Y   F  P  G        ++SP  +++ I++   +  ++AE
Sbjct: 55  FLVFIFRGIPVLIAVFLVY---FGLPATGL-------SISP-LLAMNISIGLISGGYLAE 103

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R  L  V   ++ AA A GL+  +  R + +PQ  R  +P + +++ ++LK+S  A  
Sbjct: 104 VFRGALQLVEPSEITAAKAAGLSKLQIIRYIEIPQMFRFSVPGILNEFSSVLKSSPFAYT 163

Query: 344 VGFADL 349
           VG +++
Sbjct: 164 VGISEI 169


>gi|306825525|ref|ZP_07458864.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431886|gb|EFM34863.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 266

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 128 VAFAFNEAAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGG 354
            + L K +SLA + G    FA    +GG
Sbjct: 188 LIGLTKGTSLAFSAGVVEVFAQAQILGG 215


>gi|225631073|ref|ZP_03787808.1| amino acid (glutamine) ABC transporter, permease [Wolbachia
           endosymbiont of Muscidifurax uniraptor]
 gi|225591231|gb|EEH12378.1| amino acid (glutamine) ABC transporter, permease [Wolbachia
           endosymbiont of Muscidifurax uniraptor]
          Length = 215

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 48/80 (60%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA    + A+IAEI+R+G+  + + Q EAA  L +      R ++LPQ +++I+P + ++
Sbjct: 88  IAFGLNSCAYIAEILRAGIETISKNQFEAAKTLQIPSFYMWRDIILPQVIKNILPAMINE 147

Query: 331 YLNLLKNSSLAVAVGFADLV 350
            + LL  ++L   +G  D++
Sbjct: 148 IIALLIETALISTIGGVDIM 167


>gi|325062128|gb|ADY65818.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 221

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+ +   + AEIVR  L +V   Q+EAA AL  T  +    + LPQA+  ++P   + 
Sbjct: 88  MVLAAHAGGYGAEIVRGALSSVSVQQLEAARALNFTRMQTLFRISLPQAIVEMMPSFGNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +  LK SSL   +   DL     +I N T  +  I  I +  Y ++S+++
Sbjct: 148 AIETLKLSSLVSLISITDLTFAAQSIRNLTLDSTSIYSITLLCYFAMSLIL 198


>gi|163744467|ref|ZP_02151827.1| polar amino acid uptake family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161381285|gb|EDQ05694.1| polar amino acid uptake family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 250

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           LL + T +I  +P LVLI + Y +  D    L Q    G   +S     +++ L     A
Sbjct: 67  LLAVYTTVIRAVPELVLILILYYVGTDLINQLSQAMGYGRVEISGVVAGIWV-LGVVQGA 125

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E++R  + A+P GQ+EAA A G+      R V +P  M    P L + +L   K+++
Sbjct: 126 YATEVLRGAIQAIPPGQIEAARAYGMPPLMLMRRVTIPAMMSFATPGLANLWLIATKDTA 185

Query: 340 LAVAVGFADL 349
           L   VGF++L
Sbjct: 186 LLAIVGFSEL 195


>gi|322374584|ref|ZP_08049098.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|321280084|gb|EFX57123.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 257

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 119 VAFAFNEAAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINS 178

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGT 355
            + L K +SLA + G    FA    +GG 
Sbjct: 179 LIGLTKGTSLAFSAGVVEVFAQAQILGGA 207


>gi|76665061|emb|CAJ17976.1| amino acid ABC transporter permease component [Candidatus
           Phytoplasma solani]
          Length = 251

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 1/119 (0%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A +A I+ + +  + +GQ++AA ALG+T ++  + ++ PQ+++   P +  Q++  +K
Sbjct: 102 TGANLAIIMLNNIKFLDQGQIQAAHALGMTQQQVFKYIIFPQSIKRTYPSIYHQFIINIK 161

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            ++L  ++G   LV      I   G  I   L    IYL L + +A  +N+L  K   K
Sbjct: 162 ETALFSSIGLVGLVWQAQRHIATNGDTITPYLTISIIYL-LLVFVANTINKLITKYGKK 219


>gi|289625713|ref|ZP_06458667.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646322|ref|ZP_06477665.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330869650|gb|EGH04359.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 216

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ +
Sbjct: 86  PAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPM 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  + + K + L   +   +L      +   T +  E   +   ++L++S+  +L
Sbjct: 146 LPVLGNYLIGMFKETPLLAVITIPELFQAAKQVAGMTYRYNEPYTVMALMFLAISVPTSL 205

Query: 384 FMNRLNAK 391
               L  +
Sbjct: 206 LFKYLERR 213


>gi|330982856|gb|EGH80959.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 166

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           F+S+ + L  +TAA + E VR+G+ A+P+GQ  AA A+G    +    VLLPQA R
Sbjct: 111 FLSVVVCLGLFTAARVCEQVRTGIEALPKGQESAARAMGFKLPQIYWNVLLPQAYR 166



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 32/48 (66%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +G+++G  R   N+LV+ I  VYVE+FRN+P LV +F  Y  V  +LP
Sbjct: 46  LGSVLGVMRTVPNRLVSGIATVYVEIFRNVPLLVQLFIWYFLVPDLLP 93


>gi|306829228|ref|ZP_07462418.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304428314|gb|EFM31404.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 266

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 128 VAFAFNEAAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGG 354
            + L K +SLA + G    FA    +GG
Sbjct: 188 LIGLTKGTSLAFSAGVVEVFAQAQILGG 215


>gi|323490346|ref|ZP_08095561.1| ABC transporter (permease) [Planococcus donghaensis MPA1U2]
 gi|323396016|gb|EGA88847.1| ABC transporter (permease) [Planococcus donghaensis MPA1U2]
          Length = 223

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            FI G+T+ P  ++  ++LS     F A IV + L  + +G +EAAIA+G T     + V
Sbjct: 86  KFITGTTIGP--VAASVSLSVAAIPFFARIVENSLREIDKGVIEAAIAVGATPWMIIKDV 143

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           LLP+A  SI+  +T   ++L+  S++A
Sbjct: 144 LLPEAKASIVQGITLTIISLVAYSAMA 170


>gi|89514233|gb|ABD74977.1| amino acid ABC transporter permease component [Sinorhizobium
           kostiense]
          Length = 121

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 57/114 (50%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           ++ A I +  +   P+G  EA +A+G+T  +  R ++ P  +RS  P L + +L +LK S
Sbjct: 4   SYAAVIFKDWMSVFPKGYTEAGLAIGMTRFQVRRRIVAPLLLRSATPALRNLFLVMLKVS 63

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +LA  +G  +L      +   T + +   LI   +YL +S +     +R  A I
Sbjct: 64  ALASLIGVTELSRSTSIVAGSTREPLFRYLIAAMMYLVISAISGFVQHRFEAAI 117


>gi|167563476|ref|ZP_02356392.1| histidine transport system permease protein [Burkholderia
           oklahomensis EO147]
 gi|167574437|ref|ZP_02367311.1| histidine transport system permease protein [Burkholderia
           oklahomensis C6786]
          Length = 237

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G++     R V+LP ++R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223


>gi|149914482|ref|ZP_01903012.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
 gi|149811275|gb|EDM71110.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. AzwK-3b]
          Length = 294

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 10/125 (8%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVP+ Q+E A A G+T R+    +L+PQ     +P L + ++ L+K 
Sbjct: 153 GAFAANVLYGAMRAVPQAQLETAAAYGMTRRQIFWRILVPQMWVYALPGLGNLWMVLIKA 212

Query: 338 SSLAVAVGFADLV----SVGGTIINQ-TGQAIEIILIWMFI-----YLSLSIMIALFMNR 387
           + L   +G  D+V     +GGT   + T        +W F+     YL  + +  +F+ R
Sbjct: 213 TPLLFLLGIEDIVYWARELGGTANPRFTDYPHGDWRVWYFLALLVFYLGFTRISEVFLER 272

Query: 388 LNAKI 392
           L  K+
Sbjct: 273 LMQKL 277


>gi|242309232|ref|ZP_04808387.1| glutamine ABC transporter permease GlnP [Helicobacter pullorum MIT
           98-5489]
 gi|239524273|gb|EEQ64139.1| glutamine ABC transporter permease GlnP [Helicobacter pullorum MIT
           98-5489]
          Length = 224

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 32/175 (18%)

Query: 191 VFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +FS VLG  +++       F + L + + E + +  PLL    FL +GLP + L    Y 
Sbjct: 36  LFSIVLGFCIAVVQFYKLRFLSTLCQAYIELS-RNTPLLIQLFFLYYGLPQVGLHLESYT 94

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 V     F+GGS                   ++AE  R+GL +V + Q+E+  +L
Sbjct: 95  CALIGVV-----FLGGS-------------------YMAESFRAGLESVGKIQLESGRSL 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           GL+  +    V+LPQ++   +P + +  + LLK +S+  A+  AD++ V   +I 
Sbjct: 131 GLSEMQLVFYVILPQSLVISLPYIGANVIFLLKETSVVSAIALADILYVTKDLIG 185



 Score = 39.7 bits (91), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 93  FVNTFWL----AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           F++  WL    +F G++ + ++G  +   +    + ++ +C+ Y+E+ RN P L+ +FFL
Sbjct: 20  FIDALWLTLHLSFFGILFSIVLGFCIAVVQFYKLRFLSTLCQAYIELSRNTPLLIQLFFL 79

Query: 149 Y 149
           Y
Sbjct: 80  Y 80


>gi|119386411|ref|YP_917466.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119377006|gb|ABL71770.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 275

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 7/135 (5%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-----LSCYTAAFI 281
           FL  G P  +   L Y+L    P  G    I G TV   +M+   A     L   TAA+ 
Sbjct: 82  FLFRGSPLFIQFFLAYELLVQLPRAGID--ILGITVQTSWMTRAWAGALLVLVLNTAAYS 139

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI    L  +P+G++EAA A G+      R V+ P AMR   P  T++ + L   ++L 
Sbjct: 140 AEIFYGALRNLPKGELEAADAYGMAGWTRYRRVVWPTAMRLAWPAYTNEAIFLFHATTLV 199

Query: 342 VAVGFADLVSVGGTI 356
              GF      G  +
Sbjct: 200 FFSGFPAYQQRGDAL 214


>gi|237801378|ref|ZP_04589839.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806661|ref|ZP_04593365.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024237|gb|EGI04294.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027775|gb|EGI07830.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 216

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ ++P L + 
Sbjct: 93  IGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFDRGDTWRRLILPQALKPMLPVLGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K + L   +   +L      I   T +  E   +   ++L++S+  +L    L  
Sbjct: 153 LIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLER 212

Query: 391 K 391
           +
Sbjct: 213 R 213


>gi|254460962|ref|ZP_05074378.1| arginine/histidine-ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206677551|gb|EDZ42038.1| arginine/histidine-ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 258

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G+T +++   +++PQ     +P L++ ++ L+K 
Sbjct: 118 GAFAANVLFGAMRAVPRAQIETAEAYGMTRKQSFWRIIVPQMWVYALPGLSNLWMVLIKA 177

Query: 338 SSLAVAVGFADLV----SVGGTIINQ-TGQAIEIILIWMFI-----YLSLSIMIALFMNR 387
           + L   +G  D+V     +GGT   + T        +W F+     YL+ + +  +F+ R
Sbjct: 178 TPLLFLLGVEDIVYWARELGGTKTPRFTDYPHGDWRVWYFLFLLVFYLAFTKVSEVFLER 237

Query: 388 LNAKI 392
           L  ++
Sbjct: 238 LMTRL 242


>gi|157369896|ref|YP_001477885.1| arginine transporter permease subunit ArtM [Serratia proteamaculans
           568]
 gi|157321660|gb|ABV40757.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 222

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 13/181 (7%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLT+       V S VL ++L+L           KT    PL+ I   L  G P LV I 
Sbjct: 17  TLTITALIVALVLSLVLTVILTL-----------KTPILTPLVKIYITLFTGTPLLVQIF 65

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L Y      P + ++ ++      P   ++ IAL+  +AA+  ++    + A+P GQ ++
Sbjct: 66  LIYYGPGQFPAIREYPWLWNLLSQPWLCAM-IALALNSAAYTTQLFYGAVRAIPAGQWQS 124

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             ALG++  ++ R +LLP A +  +   +++ + + K++SLA  +   +++     +  +
Sbjct: 125 CEALGMSRSQSLR-ILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLMYGR 183

Query: 360 T 360
           T
Sbjct: 184 T 184


>gi|159184744|ref|NP_354405.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140032|gb|AAK87190.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 234

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 55/98 (56%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++   +A+  EI+R+G+ ++ R Q+EA ++L L+  +  R V++  A   I P L+SQ+
Sbjct: 96  AMTLNLSAYATEIIRAGVESIHRSQVEAGLSLSLSRLQVFRYVVMKPAFAKIWPALSSQF 155

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           + +L  SS+   +   +L      I  +T ++ E  ++
Sbjct: 156 VLMLLASSICSFISVPELSGAASIIEQRTFRSFETYIV 193


>gi|303259057|ref|ZP_07345036.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302640000|gb|EFL70456.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
          Length = 238

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWM 371
           +SLA + G    FA    +GG       + I + L++M
Sbjct: 195 TSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVFM 232


>gi|159044766|ref|YP_001533560.1| putative amino-acid ABC transporter permease [Dinoroseobacter
           shibae DFL 12]
 gi|157912526|gb|ABV93959.1| putative amino-acid ABC transporter permease protein
           [Dinoroseobacter shibae DFL 12]
          Length = 295

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +    AF A ++   + AVPR Q+E A A G+T R+A   +L+PQ     +P L++ 
Sbjct: 146 IAFAVVFGAFAANVLYGAMTAVPRAQIETAEAYGMTRRQAFWRILVPQMWVYALPGLSNL 205

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           +  L+K + L   +G  D+V
Sbjct: 206 WQILVKATPLLFLLGIEDIV 225


>gi|88800373|ref|ZP_01115939.1| amino acid ABC transporter [Reinekea sp. MED297]
 gi|88776950|gb|EAR08159.1| amino acid ABC transporter [Reinekea sp. MED297]
          Length = 217

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 3/137 (2%)

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           IG   + P  +   + L  +  A+ A+I  + L +V  GQ EA+ +LG  H      +L+
Sbjct: 78  IGEWVLIPAVVVGILGLGFHYMAYNADIFVATLKSVSDGQYEASRSLGFGHTATIFYILV 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA    IP + +  + ++K++S+  A+G A+LV      I+ + +  E  ++   +Y  
Sbjct: 138 PQAFIRSIPQIGNNMILMVKDTSVLSAIGVAELVYASQYAISVSFRPFEFFIVIAIMYYI 197

Query: 377 LSIMIAL---FMNRLNA 390
           +++ + L   ++ RL A
Sbjct: 198 INVFMELGQVWLERLTA 214


>gi|254463681|ref|ZP_05077092.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
 gi|206684589|gb|EDZ45071.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium Y4I]
          Length = 294

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 13/118 (11%)

Query: 246 FDKPVLGQFNFIGGS------TVSPEFM----SLYIALSCYT---AAFIAEIVRSGLIAV 292
           +D+P+    +F+         + SP+++      ++A+  ++    AF A ++   + AV
Sbjct: 108 WDQPIRQGIDFVVCDAAKLPLSASPQWVHETYGFFLAVLTFSIVFGAFAANVLYGAMRAV 167

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           PR Q+E A A G+T R+A   +L+PQ     +P L++ ++ L+K + L   +G  D+V
Sbjct: 168 PRAQIETAEAYGMTTRQAFWRILVPQMWVYALPGLSNLWMVLIKATPLLFLLGVEDIV 225


>gi|239833819|ref|ZP_04682147.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821882|gb|EEQ93451.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 240

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 10/192 (5%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V  F+LG  + +FA   ++    +T + +   Y  T +I G+P L++I   Y  +F    
Sbjct: 33  VLGFLLGAAIGVFAA-WAKISGGRTLRTVADGY--TTIIRGIPDLLVI---YLFYFGGSA 86

Query: 251 ----LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +G++    G    P F++  +A+     A   E+ R    AV +G++EAA A G+ 
Sbjct: 87  AVTAIGKYFGAEGFVGFPGFLAGVLAIGISCGAHHTEVFRGAYRAVFKGEIEAATACGMG 146

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++ P A+R  +P L + +   LK S+L    G  +L+         TG     
Sbjct: 147 RMLKFRRIIAPLALRHALPGLGNVWQVSLKESALVSVAGVVELLRQAQIGAGSTGLPFNF 206

Query: 367 ILIWMFIYLSLS 378
            LI   +YL +S
Sbjct: 207 FLIAGALYLLIS 218


>gi|328944563|gb|EGG38729.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus sanguinis SK1087]
          Length = 163

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  RSGL AV R Q E  +++GL   +    V+LPQA    +P  ++  + L+K 
Sbjct: 76  GSYMAESFRSGLEAVSRTQREVGLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKE 135

Query: 338 SSLAVAVGFADLVSVGGTIIN 358
           +S+  AV  ADL+ V   +I 
Sbjct: 136 TSVFSAVALADLMFVAKDLIG 156


>gi|225374914|ref|ZP_03752135.1| hypothetical protein ROSEINA2194_00537 [Roseburia inulinivorans DSM
           16841]
 gi|225213235|gb|EEG95589.1| hypothetical protein ROSEINA2194_00537 [Roseburia inulinivorans DSM
           16841]
          Length = 250

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 61/120 (50%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+++E VR G+ ++  GQ+E A ALG+ +      ++LPQ  + I P + + ++  +K
Sbjct: 120 TGAYMSETVRGGINSIDVGQIEGAKALGMGYVPMMIYIILPQTFKIIAPQIGNTFVANIK 179

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++S+   +   +L  +         +  E   I   IYL+L+++    +  +   +A KE
Sbjct: 180 DTSVLNVIAVTELFYITKVAAGTYFRMFEAYTITALIYLTLTLLFNGLLKLIEKYMAGKE 239


>gi|219871254|ref|YP_002475629.1| arginine transporter permease subunit ArtM [Haemophilus parasuis
           SH0165]
 gi|219691458|gb|ACL32681.1| arginine transporter permease subunit ArtM [Haemophilus parasuis
           SH0165]
          Length = 227

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 84/171 (49%), Gaps = 11/171 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVR 286
           G P LV    ++ L +  P  GQF +I  S     +S  +    + L+  +AA+   +  
Sbjct: 58  GTPLLV----QFFLIYAGP--GQFPWIVASPFWSLLSDAWFCAMLTLALNSAAYTTLLFH 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ E   ALGL+ R  T  +L+P A++  +P  +++ + + K +SLA  +  
Sbjct: 112 GAVKAIPKGQWETCAALGLS-RLQTLKILVPYALKRALPSYSNEIILVFKGTSLASTITI 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++     +      A+ I  +   +YL ++ ++ + + R+  K+   E+
Sbjct: 171 MDIMGYARQLYGTEYDALTIYGLAGAVYLVITGIMTVILRRVERKVLSFER 221


>gi|296103154|ref|YP_003613300.1| arginine transporter permease subunit ArtM [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057613|gb|ADF62351.1| arginine transporter permease subunit ArtM [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 222

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  I      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQEYPVIWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGHGQLLYGRT 184


>gi|308186223|ref|YP_003930354.1| Arginine transport system permease protein artM [Pantoea vagans
           C9-1]
 gi|308056733|gb|ADO08905.1| Arginine transport system permease protein artM [Pantoea vagans
           C9-1]
          Length = 222

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 3/171 (1%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L  G P LV I L Y      P + Q  ++    +S  ++   +ALS  +AA+  ++   
Sbjct: 54  LFTGTPLLVQIFLIYYGPGQFPSIQQIPWLW-HLLSQPWLCAMLALSLNSAAYTTQLFYG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+P GQ ++  ALG++ RK T  +LLP A +  +   +++ + + K +SLA  +   
Sbjct: 113 AVRAIPSGQWQSCAALGMS-RKDTLRILLPYAFKRALSSYSNEVVLVFKGTSLAYTITLM 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +++  G  +  +T   I +      IYL ++ ++ L M  +  +    E++
Sbjct: 172 EVMGHGQLLYGRT-YDITVYAAAGLIYLCVNGLLTLMMRLIEKRALAFERR 221


>gi|295096442|emb|CBK85532.1| L-arginine ABC transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 222

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  I      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQEYPVIWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGHGQLLYGRT 184


>gi|260769494|ref|ZP_05878427.1| amino acid ABC transporter permease protein 3-TM
           region,His/Glu/Gln/Arg/opine [Vibrio furnissii CIP
           102972]
 gi|260614832|gb|EEX40018.1| amino acid ABC transporter permease protein 3-TM
           region,His/Glu/Gln/Arg/opine [Vibrio furnissii CIP
           102972]
          Length = 238

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 47/90 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    + + AE++R    A+ +GQ EA  +L +   +   L+  PQ +R  +P L + 
Sbjct: 109 IALGLVFSGYAAEVLRGAWKAMDKGQREAGYSLAMGRGQIFWLIERPQLLRLALPGLGNL 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++NLLK+++L   +   DL+      +  T
Sbjct: 169 WINLLKDTALVSVIALDDLMRAANIAVGAT 198



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            DS +   +L G   T  LA   +    ++GT V A  +S +K   W   VY  V R +P
Sbjct: 10  GDSGWGDELLKGLAITLGLALCALPVGMVLGTGVAALSISKHKGHRWFATVYTTVLRGLP 69

Query: 141 PLVVIFFLYKSV 152
            L+ +F +Y  V
Sbjct: 70  ELLTLFIIYHGV 81


>gi|167842410|ref|ZP_02469094.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia thailandensis MSMB43]
          Length = 243

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 1/115 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   ++L     A++ +I R+ L+ VP GQ+EAA A G+T  +    + LP A R  +P
Sbjct: 108 FVVAALSLGFIQGAYLTDIFRAALVNVPAGQVEAAHAYGMTPWQTLTRIRLPAAARLALP 167

Query: 326 PLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            + + +LN  K++S    +G F DL+         T   +   L+   ++L LSI
Sbjct: 168 GVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHYVFFYLVTAALFLLLSI 222


>gi|313890671|ref|ZP_07824298.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313120982|gb|EFR44094.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 266

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 17/162 (10%)

Query: 217 KALPLLYISTFLIFGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  P+L       +G+P  L  + +KY LH++       N I  S  +        A + 
Sbjct: 85  RGTPILVQLMLTYYGIPLFLKFLNVKYGLHWN------INAIPASIFA------ITAFAF 132

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ +E +R+ + +V  G++EAA +LG+T  +  + V++P A     P L +  + L 
Sbjct: 133 NEAAYASETIRAAIQSVDSGEIEAARSLGMTPIQVYKRVIIPNAAVVATPTLINGLIGLT 192

Query: 336 KNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFI 373
           K +SLA   G    FA    +GG       + I + L++ FI
Sbjct: 193 KGTSLAFNAGIVEMFAQAQILGGADYRYFERYISVALVYWFI 234


>gi|239831828|ref|ZP_04680157.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239824095|gb|EEQ95663.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 293

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S  TAA+ AEI+R  + +V  GQ E A ALG++ R     V+LPQA+   + P  ++
Sbjct: 167 LAFSLNTAAYQAEILRGAIQSVALGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNE 226

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + ++K S++   +   DL+ 
Sbjct: 227 IILMIKGSAIVAIITVLDLMG 247


>gi|322392218|ref|ZP_08065679.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
 gi|321144753|gb|EFX40153.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
          Length = 266

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 128 VAFAFNEAAYASETLRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGG 354
            + L K +SLA + G    FA    +GG
Sbjct: 188 LIGLTKGTSLAFSAGVVEVFAQAQILGG 215


>gi|153009567|ref|YP_001370782.1| polar amino acid ABC transporter inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561455|gb|ABS14953.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 277

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S  TAA+ AEI+R  + +V  GQ E A ALG++ R     V+LPQA+   + P  ++
Sbjct: 151 LAFSLNTAAYQAEILRGAIQSVALGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNE 210

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + ++K S++   +   DL+ 
Sbjct: 211 IILMIKGSAIVAIITVLDLMG 231


>gi|16764249|ref|NP_459864.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|167992141|ref|ZP_02573239.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168263592|ref|ZP_02685565.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|16419396|gb|AAL19823.1| arginine 3rd transport system [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205329618|gb|EDZ16382.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205347683|gb|EDZ34314.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|261246143|emb|CBG23946.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992650|gb|ACY87535.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157470|emb|CBW16960.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312911915|dbj|BAJ35889.1| arginine ABC transporter permease protein ArtM [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321223249|gb|EFX48318.1| Arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|323129192|gb|ADX16622.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
          Length = 222

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           TLT+ + A   V + V  I+L+L   F   L R             YI+ F   G P LV
Sbjct: 17  TLTVASIAVALVLALVFTIILTLKTPFVVWLVRG------------YITLFT--GTPLLV 62

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I L Y      P L ++  +      P   +L IALS  +AA+  ++    + A+P GQ
Sbjct: 63  QIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCAL-IALSLNSAAYTTQLFYGAIRAIPEGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA  +   +++     +
Sbjct: 122 WQSCSALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL 180

Query: 357 INQT 360
             +T
Sbjct: 181 YGRT 184


>gi|319408408|emb|CBI82063.1| ABC transporter, permease protein [Bartonella schoenbuchensis R1]
          Length = 235

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 3/119 (2%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ A+I      +V  GQ EA+ ALGL++      +L+PQAM   + PL ++++ ++K
Sbjct: 116 SAAYQAKIFIGSFQSVATGQHEASKALGLSNSTTFFRILIPQAMILALRPLGNEFILIIK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +S++A  V   DL+ +   I  +T      + + +I++FI   +   I L   RL   +
Sbjct: 176 SSAIASLVTIYDLMGIAKLIYARTFDFQVYVWVAIIYLFIVELIHGFIVLIERRLTRHL 234


>gi|126724999|ref|ZP_01740842.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2150]
 gi|126706163|gb|EBA05253.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2150]
          Length = 287

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   +A +    AF A  +   L AVP+ Q+E A A G++  +  R + LPQ     +P
Sbjct: 141 FLLATLAFAIVFGAFAANTLHGALGAVPKAQLETAAAFGMSRGQIFRRIHLPQMWAYALP 200

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLV----SVGGT-----IINQTGQAIEIILIWMFIYLS 376
            L++ ++ L+K + L   +G  D+V     +GGT             +   L+ +  YL 
Sbjct: 201 GLSNLWMILIKATPLLFLLGVEDIVYWARELGGTKTARFAYPHPDWRLGYFLVLLVFYLG 260

Query: 377 LSIMIALFMNRLNAKIA 393
           L+ +   F N L  +++
Sbjct: 261 LTWVSEKFFNNLTRRVS 277


>gi|315182022|gb|ADT88935.1| hypothetical transmembrane permease component of ABC transporter
           [Vibrio furnissii NCTC 11218]
          Length = 238

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 49/95 (51%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL    + + AE++R    A+ +GQ EA  +L +   +   L+  PQ +R  +P
Sbjct: 104 FGAGVIALGLVFSGYAAEVLRGAWKAMDKGQREAGYSLAMGRGQIFWLIERPQLLRLALP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            L + ++NLLK+++L   +   DL+      +  T
Sbjct: 164 GLGNLWINLLKDTALVSVIALDDLMRAANIAVGAT 198



 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 34/72 (47%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            DS +   +L G   T  LA   +    ++GT V A  +S +K   W   VY  V R +P
Sbjct: 10  GDSGWGDELLKGLAITLGLALCALPVGMVLGTGVAALSISKHKGHRWFATVYTTVLRGLP 69

Query: 141 PLVVIFFLYKSV 152
            L+ +F +Y  V
Sbjct: 70  ELLTLFIIYHGV 81


>gi|92112666|ref|YP_572594.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795756|gb|ABE57895.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 234

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 47/77 (61%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+    A++ E+ R  + A+PRGQ+EAA A G +       ++LP  + + +P +++ +L
Sbjct: 108 LAFVQGAYMTEVFRGAIQAIPRGQLEAADAYGFSRPTRFHRIVLPAMLPNALPGMSNLWL 167

Query: 333 NLLKNSSLAVAVGFADL 349
            L+K+++L   +GF +L
Sbjct: 168 ILVKDTALISVIGFEEL 184


>gi|288904631|ref|YP_003429852.1| amino acid ABC transporter permease protein [Streptococcus
           gallolyticus UCN34]
 gi|288731356|emb|CBI12907.1| putative amino acid ABC transporter permease protein [Streptococcus
           gallolyticus UCN34]
          Length = 267

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAIQAVDVGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINSL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L++  I + +  +  L   R
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIEQIGRLIEKR 249

Query: 388 LNAKIALKEKK 398
           ++       +K
Sbjct: 250 MDIDTPQSSQK 260


>gi|238796472|ref|ZP_04639980.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
 gi|238719677|gb|EEQ11485.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
          Length = 240

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 104/233 (44%), Gaps = 24/233 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-------FATR-LSRHFHEKTG--KAL 219
           FL + G     L M   AK+F+ S V G++L+L       F  R LS      T   ++ 
Sbjct: 13  FLYSDGSDTTGLAM--TAKLFLLSVVPGMLLALLMAVGQAFGPRPLSWLIRSITYFFRST 70

Query: 220 PLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           PL Y+   LI+ GL    ++ L +Q   D+P    F     +T         +AL   T+
Sbjct: 71  PL-YLQLMLIYYGLSQFDIVQLGWQD--DQPFWLLFR---DATFCAT-----LALVLNTS 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AE++   ++  PR +  A  A G++  +  R ++LP  +R  IP L ++ + LL  +
Sbjct: 120 AYVAELLAGMMVTFPRQEWVAGEAFGMSQGQIIRRLVLPATLRRGIPALNNEMVFLLHAT 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+  V       T       L+   +YL  + M+    +R   +
Sbjct: 180 SLASTVTLLDITGVARAFYASTYSPFIPFLMAAALYLLCTFMLIFLFSRAERR 232


>gi|325977608|ref|YP_004287324.1| amino acid ABC transporter membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325177536|emb|CBZ47580.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 267

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAIQAVDVGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINSL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L++  I + +  +  L   R
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIEQIGRLIEKR 249

Query: 388 LNAKIALKEKK 398
           ++       +K
Sbjct: 250 MDIDTPQSSQK 260


>gi|306830627|ref|ZP_07463792.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304427135|gb|EFM30242.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 267

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAIQAVDVGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINSL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L++  I + +  +  L   R
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIEQIGRLIEKR 249

Query: 388 LNAKIALKEKK 398
           ++       +K
Sbjct: 250 MDIDTPQSSQK 260


>gi|238749314|ref|ZP_04610819.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
 gi|238711969|gb|EEQ04182.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
          Length = 240

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 32/199 (16%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--------------FATRLSRHFHEKT 215
           FL + G     L M   AK+F+ S   G++L+L              +  R   +F   T
Sbjct: 13  FLYSDGSEITGLAM--TAKLFLLSVFPGLLLALIMAVGQAFGPRPLAWLIRSVTYFFRST 70

Query: 216 GKALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
                 LY+   LI+ GL    ++ L +Q   D+P    F       V        +AL 
Sbjct: 71  P-----LYLQLMLIYYGLSQFEIVQLGWQD--DQPFWLLFRDATFCAV--------LALV 115

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T+A++AE++   ++  PR +  A  A G+T  +  R ++LP  +R  IP L ++ + L
Sbjct: 116 LNTSAYVAELLAGMMVTFPRQEWVAGEAFGMTQWQIIRRLVLPATLRRGIPALNNEMVFL 175

Query: 335 LKNSSLAVAVGFADLVSVG 353
           L  +SLA  V   D+  V 
Sbjct: 176 LHATSLASTVTLLDITGVA 194


>gi|23501835|ref|NP_697962.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|161618908|ref|YP_001592795.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|163843220|ref|YP_001627624.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|254704253|ref|ZP_05166081.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|254719049|ref|ZP_05180860.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           sp. 83/13]
 gi|256061051|ref|ZP_05451207.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           neotomae 5K33]
 gi|256369377|ref|YP_003106885.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261325052|ref|ZP_05964249.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261754921|ref|ZP_05998630.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|265984041|ref|ZP_06096776.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306838982|ref|ZP_07471804.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|306840463|ref|ZP_07473222.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306843853|ref|ZP_07476448.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|23347771|gb|AAN29877.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|161335719|gb|ABX62024.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|163673943|gb|ABY38054.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
 gi|255999537|gb|ACU47936.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261301032|gb|EEY04529.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261744674|gb|EEY32600.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|264662633|gb|EEZ32894.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306275608|gb|EFM57332.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306289478|gb|EFM60696.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306405949|gb|EFM62206.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 277

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S  TAA+ AEI+R  + +V  GQ E A ALG++ R     V+LPQA+   + P  ++
Sbjct: 151 LAFSLNTAAYQAEILRGAIESVAVGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNE 210

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + ++K S++   +   DL+ 
Sbjct: 211 IILMIKGSAIVAIITVLDLMG 231


>gi|254501362|ref|ZP_05113513.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222437433|gb|EEE44112.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 275

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 45/79 (56%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            S  TAA+ AEI+R  +  VP+GQ E   ALGL+       ++LPQA+   + P  ++ +
Sbjct: 151 FSLNTAAYQAEILRGAIQNVPKGQWEGGEALGLSRNVIFFKIILPQALMVALRPYGNEII 210

Query: 333 NLLKNSSLAVAVGFADLVS 351
            ++K S++A  V   DL+ 
Sbjct: 211 LMIKGSAIASIVTIYDLMG 229


>gi|206577412|ref|YP_002239488.1| arginine ABC transporter, permease protein ArtM [Klebsiella
           pneumoniae 342]
 gi|288936336|ref|YP_003440395.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510608|ref|ZP_06549978.1| arginine transport system permease artM [Klebsiella sp. 1_1_55]
 gi|206566470|gb|ACI08246.1| arginine ABC transporter, permease protein ArtM [Klebsiella
           pneumoniae 342]
 gi|288891045|gb|ADC59363.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777324|gb|EFD85322.1| arginine transport system permease artM [Klebsiella sp. 1_1_55]
          Length = 222

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L  + ++      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQDYPWLWHLISEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPDGQWQSCSALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGHGQLLYGRT 184


>gi|238788679|ref|ZP_04632471.1| Histidine transport system permease protein hisQ [Yersinia
           frederiksenii ATCC 33641]
 gi|238723274|gb|EEQ14922.1| Histidine transport system permease protein hisQ [Yersinia
           frederiksenii ATCC 33641]
          Length = 228

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 14/133 (10%)

Query: 226 TFLIFGLPTLVLI-----ALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTA 278
           T LI G+P LVL+      L+  L+     LG  Q N      + P    + I L     
Sbjct: 53  TTLIRGVPDLVLMLLIFYGLQITLNTITESLGFEQIN------IDPLSAGI-ITLGFIYG 105

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E  R   +AVP GQ+EAA A G    +  R ++ P  MR  +P + + +  +LK +
Sbjct: 106 AYFTETFRGAYMAVPAGQIEAARAFGFNSSQIFRRIMFPAMMRYALPGIGNNWQVILKAT 165

Query: 339 SLAVAVGFADLVS 351
           +L   +G  D+V 
Sbjct: 166 ALVSILGLNDVVK 178



 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + IIG +   G+LS+N+L++ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLSSNRLLSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLY 149
           V++  ++
Sbjct: 63  VLMLLIF 69


>gi|260566498|ref|ZP_05836968.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|297248903|ref|ZP_06932617.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|260156016|gb|EEW91096.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|297174267|gb|EFH33618.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
          Length = 277

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S  TAA+ AEI+R  + +V  GQ E A ALG++ R     V+LPQA+   + P  ++
Sbjct: 151 LAFSLNTAAYQAEILRGAIESVAVGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNE 210

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + ++K S++   +   DL+ 
Sbjct: 211 IILMIKGSAIVAIITVLDLMG 231


>gi|227533181|ref|ZP_03963230.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189195|gb|EEI69262.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 238

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 9/184 (4%)

Query: 212 HEKTGKALPLLYIS-TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           H    + L LLY     L+   P L+L+ L +   +  P+L Q   I  S  +    ++ 
Sbjct: 52  HFSHSRVLELLYNGFVSLMRATPVLLLLMLVF---YGMPLLFQLVGIDISWWAKTSFAI- 107

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+    +A+ +E +RS   ++P+ Q +A  +L  +   A R +L PQ   + +P + + 
Sbjct: 108 LAIGLENSAYFSENLRSAYASIPQSQYDACTSLHFSRIAAIRRILGPQVFAAALPNIGNT 167

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNR 387
            + ++KNS+    +G  DL      II Q     Q + + ++   IY ++   I  F  +
Sbjct: 168 LITIVKNSAYVYVIGITDLYE-QAQIIAQASFGKQQVVVFIVLSLIYWAICAAIQAFFTQ 226

Query: 388 LNAK 391
           L  +
Sbjct: 227 LERR 230


>gi|56708860|ref|YP_164901.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56680545|gb|AAV97210.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 250

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 10/134 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFD-----KPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           LL I T ++  +P LVLI + Y +  D        LG     G   +S     +++ L  
Sbjct: 67  LLAIYTTVVRAVPELVLILILYFVGTDLINRASEALG----YGRVEISGVAAGIWV-LGV 121

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+  E++R  ++AVP+GQ+EAA A G+      R V +P  +   +P L + +L   
Sbjct: 122 VQGAYSTEVLRGAILAVPQGQIEAARAFGMPPVMLMRRVTIPAMLSFALPGLANLWLIAT 181

Query: 336 KNSSLAVAVGFADL 349
           K+++L   VGF++L
Sbjct: 182 KDTALLAVVGFSEL 195


>gi|293365116|ref|ZP_06611833.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307702178|ref|ZP_07639138.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|291316566|gb|EFE57002.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307624191|gb|EFO03168.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 266

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 128 VAFAFNEAAYASETIRAAILSVNPGEIEAARSLGMTRVQVYRRVIIPNAAVVATPTLINS 187

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGG 354
            + L K +SLA + G    FA    +GG
Sbjct: 188 LIGLTKGTSLAFSAGVVEVFAQAQILGG 215


>gi|49474283|ref|YP_032325.1| ABC transporter, permease protein [Bartonella quintana str.
           Toulouse]
 gi|49239787|emb|CAF26177.1| ABC transporter, permease protein [Bartonella quintana str.
           Toulouse]
          Length = 235

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 50/84 (59%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +EI +   ++V   Q EA+ ALGL+       ++LPQAM   + PL ++++ ++K
Sbjct: 116 SAAYQSEIFKGSFLSVTARQREASKALGLSSSTTFFRIILPQAMVLALRPLGNEFILMIK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQT 360
           +S++A  V   DL+ +     ++T
Sbjct: 176 SSAIASLVTIYDLMGIAKLTYSRT 199


>gi|145297728|ref|YP_001140569.1| arginine transporter permease subunit ArtM [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850500|gb|ABO88821.1| ABC-type arginine transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 220

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 11/181 (6%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L A  ++    ++   A  L+ +   +  G P L+ I L Y      P  GQF ++    
Sbjct: 28  LMAAAMTWVLEQRIPVATQLVQLWVLIFTGTPLLIQIFLIYY----GP--GQFEWLKSGP 81

Query: 262 VSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           + P     +    +AL   TAA+   + +  L A+P G++EA  ALG +  + T  + + 
Sbjct: 82  LWPLLKQPWFCAVLALGFNTAAYSTRLFKGALDAIPSGEVEACRALGFSAGQ-TLWMKVR 140

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A R ++P  +++ + +LK SSLA  +   D++ +   +  QT   + +  +   +YL++
Sbjct: 141 HAARRLVPAYSNEVILVLKGSSLASTITIMDVMGLAQRLNAQTYDTLAVFTVAGALYLTM 200

Query: 378 S 378
           +
Sbjct: 201 N 201


>gi|85059072|ref|YP_454774.1| arginine transporter permease subunit ArtQ [Sodalis glossinidius
           str. 'morsitans']
 gi|84779592|dbj|BAE74369.1| arginine ABC transporter permease component [Sodalis glossinidius
           str. 'morsitans']
          Length = 238

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 1/118 (0%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP F+   IAL+   AA+ ++ +R  L A+ +GQ E+  ALG+++      V+LPQ  R
Sbjct: 101 VSP-FLCGVIALALLYAAYASQTLRGALKAIAQGQWESGQALGMSNGATFFRVILPQMWR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             +P L +Q+L LLK+++L   +   DL+    +I++ T Q     L+   +YL +++
Sbjct: 160 HALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIVSFTQQPFTWYLLAAGVYLVITL 217


>gi|153010785|ref|YP_001371999.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562673|gb|ABS16170.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Ochrobactrum anthropi ATCC 49188]
          Length = 219

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 59/112 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+ AE+VR  L AVP  Q EAA AL  +       ++LPQA+  ++P   + 
Sbjct: 88  MGLGLNIGAYGAEVVRGALQAVPEAQHEAARALNFSRGHTLFHIVLPQAVVEMMPAFGNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            ++ LK+++LA  +  +DL      + N T   + I  + +  Y ++++++A
Sbjct: 148 AIHNLKDTALASLIAISDLTFQAQRLRNLTLDNVTIYSLTLLGYFAMALVLA 199



 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 36/70 (51%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           + Y  A+  G   T  LA S M   T++    G  R +   +++ I  +Y+E+FR    L
Sbjct: 4   TEYLPALFKGAQITVVLALSSMAIGTLLAFAAGIARFAGGPILSTIAVIYIEIFRGTSLL 63

Query: 143 VVIFFLYKSV 152
           V +F+LY ++
Sbjct: 64  VQLFWLYYAL 73


>gi|89071268|ref|ZP_01158439.1| ABC transporter, permease protein, HisMQ family protein [Oceanicola
           granulosus HTCC2516]
 gi|89043198|gb|EAR49431.1| ABC transporter, permease protein, HisMQ family protein [Oceanicola
           granulosus HTCC2516]
          Length = 290

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A GLT  +  R +L+PQ     +P L++ ++ L+K 
Sbjct: 149 GAFAANVLYGAMRAVPRAQIETAEAYGLTGAQIFRRILVPQMWVYALPGLSNLWMVLIKA 208

Query: 338 SSLAVAVGFADLV----SVGGTIINQ 359
           + L   +G  D+V     +GGT   Q
Sbjct: 209 TPLLFLLGVEDIVYWARELGGTKTPQ 234


>gi|319407361|emb|CBI81008.1| ABC transporter, permease protein [Bartonella sp. 1-1C]
          Length = 234

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 5/164 (3%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALS 274
           KA+  L+ S F   GLP ++ +   Y       +   F+F+    +     F++  +A S
Sbjct: 56  KAIATLFSSVFR--GLPEILTLFFVYY-GLQNCIQAIFDFLNIDIIFSINAFIAGVLAFS 112

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AAF  E+  +      + Q EAA  LGL+       ++ PQ + + +P L++ +L L
Sbjct: 113 MVFAAFSCEVWLAAFKMFDKSQYEAAQVLGLSRSTTFFRIVFPQLLHNALPGLSNNWLTL 172

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           LK++SL   +   DL+         T + I   L+   +YL  S
Sbjct: 173 LKDTSLVSTISLLDLMRQTNLAATATNEPILFYLVACLLYLLFS 216


>gi|238785181|ref|ZP_04629174.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
 gi|238713929|gb|EEQ05948.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
          Length = 240

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 59/121 (48%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   T+A++AE++   ++  PR +  A  A G++  +  R ++LP  +R  IP L ++
Sbjct: 112 LALVLNTSAYVAELLAGMMVTFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNE 171

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LL  +SLA  V   D+  V  +    T       L+   +YL  + M+    +R   
Sbjct: 172 MVFLLHATSLASTVTLLDITGVARSFYASTYSPFIPFLMAAALYLLCTFMLIFLFSRAER 231

Query: 391 K 391
           +
Sbjct: 232 R 232


>gi|169826499|ref|YP_001696657.1| D-methionine transport system permease [Lysinibacillus sphaericus
           C3-41]
 gi|168990987|gb|ACA38527.1| D-methionine transport system permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 220

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 22/206 (10%)

Query: 192 FSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FS ++GI L L    TR  + F  K    L  L I+  +I  +P ++L  L + L F K 
Sbjct: 29  FSILIGIPLGLLIVLTRPGQSFENKFFYQLFNLIIN--IIRSVPFIIL--LFFILPFTKV 84

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++G       +T+  +   + + L  YTA +IA ++ S L+ V  G +EA  A+G+  R 
Sbjct: 85  IVG-------TTIGVK--GVIVPLVVYTAPYIARLMESALLEVDSGVIEAYTAMGIKRRH 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEI 366
               VLL +A  SII  LT   + L+  +++A  VG   L    G +  + G     +++
Sbjct: 136 IIWHVLLREARPSIILGLTIATIGLIGATAMAGMVGAGGL----GDLAYRYGHLRYEVDV 191

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +FI + L   I    NR++AK+
Sbjct: 192 MYATVFILIILVQSIQSIGNRISAKL 217


>gi|238790815|ref|ZP_04634572.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           frederiksenii ATCC 33641]
 gi|238721092|gb|EEQ12775.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           frederiksenii ATCC 33641]
          Length = 240

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 48/90 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL   T+A++AE++   ++  PR +  A  A G+T  +  R ++LP  +R  IP L ++
Sbjct: 112 LALVLNTSAYVAELLAGMMVTFPRQEWVAGEAFGMTQWQIIRRLVLPATLRRGIPALNNE 171

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            + LL  +SLA  V   D+  V  +    T
Sbjct: 172 MVFLLHATSLASTVTLLDITGVARSFYAAT 201


>gi|307246271|ref|ZP_07528352.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306852880|gb|EFM85104.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 227

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 108/223 (48%), Gaps = 19/223 (8%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           PT ++   A   + +FVL ++L+   +        K  KA+   Y+  F   G P LV  
Sbjct: 14  PT-SLSLTAVSLLIAFVLAVILTFLLS-----MESKLIKAIVNGYLMLFT--GTPLLV-- 63

Query: 239 ALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             ++ L +  P  GQF +I  S     +S  +    +AL+  +AA+  ++    + A+P+
Sbjct: 64  --QFFLIYHGP--GQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPK 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E   ALGL+ R  T  +L+  A+R  +P  +++ + + K +SLA  +   D++    
Sbjct: 120 GQWETCAALGLS-RLDTLKILISYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYAR 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +      AI I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 179 QLYGTEYDAITIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|312961853|ref|ZP_07776351.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311284112|gb|EFQ62695.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 272

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 12/187 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYIST 226
           +F +  GLS   +T+     +F+ S VLG  LS  L   R+S HF  +       + + T
Sbjct: 13  LFSDGAGLSGVAMTL----WLFIISVVLGFFLSIPLALARVSAHFWLRWP-----VEMYT 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +L  G P  + + + Y   +   V+ Q N +             +A    T A+  EI  
Sbjct: 64  YLFRGTPLYIQLLICYTGLYSLEVV-QDNALLNQFFRNALNCTLLAFVLNTCAYTVEIFA 122

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             +  +P G++EAA A GL   +    V++P A+R  +P  +++ + +L  +SLA     
Sbjct: 123 GAIRNIPHGEIEAARAYGLHGWRLNLFVVVPAALRRALPAYSNEMILMLHATSLAFTATV 182

Query: 347 ADLVSVG 353
           AD++ V 
Sbjct: 183 ADILKVA 189


>gi|254701711|ref|ZP_05163539.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 5 str. 513]
 gi|261752262|ref|ZP_05995971.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261742015|gb|EEY29941.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 277

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A S  TAA+ AEI+R  + +V  GQ E A ALG++ R     V+LPQA+   + P  ++
Sbjct: 151 LAFSLNTAAYQAEILRGAIESVAVGQWEGAAALGISKRVTFWKVILPQALIVALRPYGNE 210

Query: 331 YLNLLKNSSLAVAVGFADLVS 351
            + ++K S++   +   DL+ 
Sbjct: 211 IILMIKGSAIVAIITVLDLMG 231


>gi|332161761|ref|YP_004298338.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318605732|emb|CBY27230.1| histidine ABC transporter, permease protein HisM [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665991|gb|ADZ42635.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 240

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 30/221 (13%)

Query: 186 NAKIFVFSFVLGIVLSL--------------FATRLSRHFHEKTGKALPLLYISTFLIF- 230
            AK+F+ S V G++L+L              +  R   +F   T      LY+   LI+ 
Sbjct: 27  TAKLFLLSVVPGLLLALVMAVGQAFGPRPLAWLIRSVTYFFRSTP-----LYLQLMLIYY 81

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GL    ++ L +Q   D+P    F     +T         +AL   T+A++AE++   ++
Sbjct: 82  GLSQFDIVQLGWQD--DQPFWLLFR---DATFCAT-----LALVLNTSAYVAELLAGMMV 131

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR +  A  A G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+ 
Sbjct: 132 TFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDIT 191

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            V       T       L+   +YL  + M+    +R   +
Sbjct: 192 GVARAFYAATYSPFIPFLMAAALYLLCTFMLIFLFSRAERR 232


>gi|261339172|ref|ZP_05967030.1| hypothetical protein ENTCAN_05396 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319017|gb|EFC57955.1| arginine ABC transporter, permease protein ArtM [Enterobacter
           cancerogenus ATCC 35316]
          Length = 222

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  I      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQEYPVIWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGHGQLLYGRT 184


>gi|260575754|ref|ZP_05843751.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022152|gb|EEW25451.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 277

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAA+ AEI    L ++P+G +EAA A GLT  +  R +  P  +R   P  T++ + LL+
Sbjct: 136 TAAYSAEIFYGALRSIPKGDLEAADAYGLTGWQRFRRIEWPTMLRLGWPGYTNEAIFLLQ 195

Query: 337 NSSLAVAVGFADLVSVGGTI 356
           +S+L    GF      G  +
Sbjct: 196 SSTLVYFSGFPAFQQQGDAL 215


>gi|238798539|ref|ZP_04642017.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
 gi|238717626|gb|EEQ09464.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
          Length = 198

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 11/134 (8%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++I G P L  +A+ Y   F  P +G       +TV        I+L+ Y+AA+  EI R
Sbjct: 41  WIIRGTPYLAQLAVFY---FGLPAIGVTLTAVEATV--------ISLAIYSAAYFGEIFR 89

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +   ++ +GQ+EAA    ++   +   +  PQA+R  +P L +Q++  +K S++A  +  
Sbjct: 90  TAWKSLGQGQLEAAQVHDISAWNSFWHIQTPQALRFSLPLLGNQFILTIKESAVASIITV 149

Query: 347 ADLVSVGGTIINQT 360
            +L    G I+  T
Sbjct: 150 PELTMTTGQIVANT 163


>gi|170738479|ref|YP_001767134.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168192753|gb|ACA14700.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 285

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 48/88 (54%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A +AEIVR  + ++P  Q EAA AL  T R+    ++LPQ ++ ++PP  + Y  +   +
Sbjct: 165 ANVAEIVRGAVRSIPTTQWEAAEALAFTRRQTMWRIILPQCLKRMLPPWMNLYALVAMAT 224

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEI 366
             A  VG ++++++   +    G   E+
Sbjct: 225 VQASIVGVSEMLTLTAQVHAAEGGRPEL 252


>gi|319761803|ref|YP_004125740.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330826337|ref|YP_004389640.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317116364|gb|ADU98852.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329311709|gb|AEB86124.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 237

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 9/162 (5%)

Query: 226 TFLIFGLPTLVLIALKY----QLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAF 280
           T+ + G P L+ + L Y    QL +   V  +++ +   T   E F    ++ S  TAA+
Sbjct: 59  TYFMRGTPLLIQVYLIYYGVAQLEW---VQARWDDVWPWTNFKEPFFCALLSFSLNTAAY 115

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE +   +    +G++EAA A+G+      R ++LP A+R ++P   ++ + +L +SSL
Sbjct: 116 TAETLAGSIRETSKGEVEAARAMGMGPWMLMRRIVLPSAIRRMLPAYGNEVVMMLHSSSL 175

Query: 341 AVAV-GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           A  V    DL      +        E  L    IYL +++ +
Sbjct: 176 ASTVPALTDLTGAASRVYADFYLPFEAYLFAAAIYLCITLCL 217


>gi|170743616|ref|YP_001772271.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168197890|gb|ACA19837.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 278

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 13/148 (8%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LGI L L           +    LP  ++ T L+   P LV++ L   + +  PV  + 
Sbjct: 85  ILGIGLGLM------QISTRAAVRLPARFV-THLLRNSPWLVILFL---VTYFMPV--EV 132

Query: 255 NFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
              GG  V  P++    +A +      I+EI+R  + ++P GQ E+A  L  T  +  R 
Sbjct: 133 RLPGGWLVPVPDWSKATLAFALPVMGNISEILRGAVRSIPSGQWESAEGLAFTRAQTLRY 192

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++LPQ +R  IPP  + Y  L  ++ +A
Sbjct: 193 IILPQCVRRCIPPWMNWYAMLTLSTPMA 220


>gi|270261142|ref|ZP_06189415.1| transporter [Serratia odorifera 4Rx13]
 gi|270044626|gb|EFA17717.1| transporter [Serratia odorifera 4Rx13]
          Length = 222

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 89/178 (50%), Gaps = 5/178 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           + T+  + + + ++ +VLSL  T +      KT    PL+ I   L  G P LV I L Y
Sbjct: 12  LHTSLTLTITALIVALVLSLLLTVI---LTLKTPILTPLVKIYITLFTGTPLLVQIFLIY 68

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P + ++ ++      P   ++ IAL+  +AA+  ++    + A+P GQ ++  A
Sbjct: 69  YGPGQFPAIREYPWLWNLLSQPWLCAM-IALALNSAAYTTQLFYGAVRAIPAGQWQSCEA 127

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           LG++  ++ R +LLP A +  +   +++ + + K++SLA  +   +++     +  +T
Sbjct: 128 LGMSRSQSLR-ILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLMYGRT 184


>gi|238763901|ref|ZP_04624858.1| Histidine transport system permease protein hisQ [Yersinia
           kristensenii ATCC 33638]
 gi|238697869|gb|EEP90629.1| Histidine transport system permease protein hisQ [Yersinia
           kristensenii ATCC 33638]
          Length = 228

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVP GQ+EAA A G +  +  R ++ P  MR  +P + + 
Sbjct: 98  ITLGFIYGAYFTETFRGAYMAVPVGQIEAARAFGFSSSQIFRRIMFPAMMRYALPGIGNN 157

Query: 331 YLNLLKNSSLAVAVGFADLV 350
           +  +LK ++L   +G  D+V
Sbjct: 158 WQVILKATALVSILGLNDVV 177



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y+  I  G + T  LA   ++ + IIG +   G+LS+N+L++ +   Y  + R +P L
Sbjct: 3   DGYSKLIFEGALVTLELALCSVLLSVIIGLIGAGGKLSSNRLLSGLFECYTTLIRGVPDL 62

Query: 143 VVIFFLYKSVLSVL 156
           V++  ++  +  VL
Sbjct: 63  VLMLLIFYGLQIVL 76


>gi|76664993|emb|CAJ17938.1| amino acid ABC transporter, substrate binding component [Candidatus
           Phytoplasma solani]
          Length = 350

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 10/104 (9%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCY-------TAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           FNFI   T    F ++ IA S         T A + +I+   +  + +GQ+EA  ALG+T
Sbjct: 207 FNFI---TTIESFKNIKIAFSASLIVLLLNTIANLIQIMMHNINLLDKGQIEAGYALGMT 263

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            ++    ++  Q+++   P +  Q++  +K++SL   +GF+ L+
Sbjct: 264 QKQVFNCIIFEQSIKKTYPAVGKQFITNIKDTSLFSIIGFSSLL 307


>gi|222153536|ref|YP_002562713.1| ABC transporter permease [Streptococcus uberis 0140J]
 gi|222114349|emb|CAR43067.1| ABC transporter permease protein [Streptococcus uberis 0140J]
          Length = 274

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +   AA+ +E +R+ + +V  G++EAA +LG+T  +  + V++P A     P L + 
Sbjct: 136 VAFAFNEAAYTSETIRAAIQSVNSGEIEAARSLGMTPFQVYKRVIIPNAAVVATPTLING 195

Query: 331 YLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            + L K +SLA   G    FA    +GG       + I + L    +Y  +SI I  F +
Sbjct: 196 LIGLTKGTSLAFNAGIVEMFAQAQILGGADYRYFERYISVAL----VYWVISIAIEQFGS 251

Query: 387 RLNAKIALKE 396
            L   +A+ +
Sbjct: 252 YLEKTMAIGD 261


>gi|325272613|ref|ZP_08138972.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas sp. TJI-51]
 gi|324102255|gb|EGB99742.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas sp. TJI-51]
          Length = 237

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 13/150 (8%)

Query: 222 LYISTFLIFGLPTLVLIALKY------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++  T++  G P  + + + Y      Q+  D+P L  F F  G   +       +A + 
Sbjct: 59  VWFYTYVFRGTPLYIQLLILYTGIYSLQVVRDQPTLDAF-FREGMNCT------LLAFAL 111

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A+  EI    + A P G++EA  A G++     R ++LP A+R  +P  +++ + +L
Sbjct: 112 NTCAYTTEIFAGAIRATPYGEIEAGRAYGMSTFTLYRRIILPSALRRSLPYYSNEVILML 171

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +++LA      DL+ V   + + T  + E
Sbjct: 172 HSTTLAFTATVPDLLKVARDVNSATYSSFE 201


>gi|99081555|ref|YP_613709.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99037835|gb|ABF64447.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 268

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 17/162 (10%)

Query: 254 FNFIGGSTVSPEFMSL-------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           F F+   +VSP F  L        I L   T+A+ AEI    L ++P+G +EAA A GL+
Sbjct: 97  FVFLSLKSVSPIFDPLSAAWLGALIVLFLNTSAYSAEIFYGALRSIPKGDLEAADAYGLS 156

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ P  MR   P  T++ + L   ++L    GF      G  +      A + 
Sbjct: 157 GWSRFRRVIWPTMMRLAWPAYTNEAIFLFHATTLVYFSGFPAWRQKGDALYYANYFADKT 216

Query: 367 --------ILIWMFIYLSLSIMIALFM--NRLNAKIALKEKK 398
                   IL + FI L+L+I+    M   RLN  +  + ++
Sbjct: 217 FNPFVPYPILAFYFILLTLAIIAVFGMINTRLNRHMPQELRR 258


>gi|118590273|ref|ZP_01547676.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118437245|gb|EAV43883.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 275

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A S  T+A+ AEI+R  +  V RGQ E A ALG+  +     ++LPQA+   + P  ++ 
Sbjct: 150 AFSLNTSAYQAEILRGAIQNVSRGQWEGAAALGINKKITFFKIILPQALIVALRPYGNEI 209

Query: 332 LNLLKNSSLAVAVGFADL 349
           + +LK S++A  V   DL
Sbjct: 210 ILMLKGSAIAAIVTVFDL 227


>gi|16759798|ref|NP_455415.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29142429|ref|NP_805771.1| arginine transporter permease ArtM [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161614847|ref|YP_001588812.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|168230795|ref|ZP_02655853.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168240769|ref|ZP_02665701.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168466506|ref|ZP_02700368.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168819948|ref|ZP_02831948.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194443230|ref|YP_002040126.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194450010|ref|YP_002044918.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194469096|ref|ZP_03075080.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197263817|ref|ZP_03163891.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242631|ref|YP_002214852.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389807|ref|ZP_03216418.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929999|ref|ZP_03221020.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205352137|ref|YP_002225938.1| arginine transporter permease ArtM [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856320|ref|YP_002242971.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213022066|ref|ZP_03336513.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213052698|ref|ZP_03345576.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213428041|ref|ZP_03360791.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213580629|ref|ZP_03362455.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213609526|ref|ZP_03369352.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213647862|ref|ZP_03377915.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|224582738|ref|YP_002636536.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|289825017|ref|ZP_06544380.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25296625|pir||AE0607 arginine transport system permease protein ArtM STY0921 [imported]
           - Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502091|emb|CAD05327.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138059|gb|AAO69620.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|161364211|gb|ABX67979.1| hypothetical protein SPAB_02600 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401893|gb|ACF62115.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194408314|gb|ACF68533.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194455460|gb|EDX44299.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|195630950|gb|EDX49536.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197242072|gb|EDY24692.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197937147|gb|ACH74480.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602252|gb|EDZ00798.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204320993|gb|EDZ06194.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205271918|emb|CAR36761.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205334830|gb|EDZ21594.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339892|gb|EDZ26656.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205343002|gb|EDZ29766.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|206708123|emb|CAR32416.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467265|gb|ACN45095.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|320085162|emb|CBY94949.1| L-cystine transport system permease protein tcyB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|322713919|gb|EFZ05490.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|326622605|gb|EGE28950.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326627180|gb|EGE33523.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 222

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 20/222 (9%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           TLT+ + A   V + V  I+L+L   F   L R             YI+ F   G P LV
Sbjct: 17  TLTVASIAVALVLALVFTIILTLKTPFVVWLVRG------------YITLFT--GTPLLV 62

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I L Y      P L ++  +      P   +L IALS  +AA+  ++    + A+P GQ
Sbjct: 63  QIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCAL-IALSLNSAAYTTQLFYGAIRAIPEGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA  +   +++     +
Sbjct: 122 WQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL 180

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 181 YGRTYDVV-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221


>gi|168236833|ref|ZP_02661891.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194735510|ref|YP_002113981.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197251237|ref|YP_002145841.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|238913405|ref|ZP_04657242.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|194711012|gb|ACF90233.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197214940|gb|ACH52337.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197290110|gb|EDY29467.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|322616362|gb|EFY13271.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619612|gb|EFY16487.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622692|gb|EFY19537.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628604|gb|EFY25391.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631541|gb|EFY28297.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637068|gb|EFY33771.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641733|gb|EFY38369.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644474|gb|EFY41014.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650065|gb|EFY46482.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654142|gb|EFY50465.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658057|gb|EFY54324.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663531|gb|EFY59733.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670267|gb|EFY66407.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671503|gb|EFY67625.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676859|gb|EFY72926.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682784|gb|EFY78803.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686463|gb|EFY82445.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323196083|gb|EFZ81246.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196771|gb|EFZ81915.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202950|gb|EFZ87984.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208990|gb|EFZ93927.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211895|gb|EFZ96723.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215173|gb|EFZ99918.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222376|gb|EGA06754.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323223892|gb|EGA08191.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229851|gb|EGA13974.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233076|gb|EGA17172.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240811|gb|EGA24853.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243128|gb|EGA27148.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248670|gb|EGA32598.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251671|gb|EGA35538.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257341|gb|EGA41039.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261929|gb|EGA45495.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267945|gb|EGA51424.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323271988|gb|EGA55403.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 222

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           TLT+ + A   V + V  I+L+L   F   L R             YI+ F   G P LV
Sbjct: 17  TLTVASIAVALVLALVFTIILTLKTPFVVWLVRG------------YITLFT--GTPLLV 62

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I L Y      P L ++  +      P   +L IALS  +AA+  ++    + A+P GQ
Sbjct: 63  QIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCAL-IALSLNSAAYTTQLFYGAIRAIPEGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA  +   +++     +
Sbjct: 122 WQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL 180

Query: 357 INQT 360
             +T
Sbjct: 181 YGRT 184


>gi|167587516|ref|ZP_02379904.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 244

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++ +I R+ L+ VP GQ+EAA A GLT  +    + LP A R  +P + + +LN  K++
Sbjct: 121 AYLTDIFRAALVNVPAGQVEAAHAYGLTPWQTLIRIRLPAAARLALPGVGNVWLNATKDA 180

Query: 339 SLAVAVG-FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           S    +G F DL+         T   +   L+   ++L LSI
Sbjct: 181 SFISVLGSFTDLLKASQLAAGATRHYVFFYLVTAALFLLLSI 222


>gi|149276063|ref|ZP_01882208.1| DL-methionine transporter permease subunit [Pedobacter sp. BAL39]
 gi|149233491|gb|EDM38865.1| DL-methionine transporter permease subunit [Pedobacter sp. BAL39]
          Length = 218

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 15/135 (11%)

Query: 192 FSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F FVLG+     LF TR  +    +T   +   ++S F    +P ++LI   + + F + 
Sbjct: 26  FGFVLGLPAGVLLFMTRKGQVLEHRTSNYILSAFVSIFR--SIPFIILIV--WMIPFTRM 81

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++G       +++  E  +  + LS   A FIA +V + L  VP G +EAA A+G T  +
Sbjct: 82  LVG-------TSIGVE--AALVPLSIGAAPFIARMVENSLAEVPAGLIEAARAMGATPFQ 132

Query: 310 ATRLVLLPQAMRSII 324
             R VLLP+A+ S+I
Sbjct: 133 VVRKVLLPEALPSLI 147


>gi|56414022|ref|YP_151097.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362945|ref|YP_002142582.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56128279|gb|AAV77785.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197094422|emb|CAR59938.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 222

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           TLT+ + A   V + V  I+L+L   F   L R             YI+ F   G P LV
Sbjct: 17  TLTVASIAVALVLALVFTIILTLKTPFVVWLVRG------------YITLFT--GTPLLV 62

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I L Y      P L ++  +      P   +L IALS  +AA+  ++    + A+P GQ
Sbjct: 63  QIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCAL-IALSLNSAAYTTQLFYGAIRAIPEGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA  +   +++     +
Sbjct: 122 WQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL 180

Query: 357 INQT 360
             +T
Sbjct: 181 YGRT 184


>gi|289806807|ref|ZP_06537436.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 96

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L     A+  E  R   +AVP+G +EAA A G TH +  R ++ P  MR  +P + + 
Sbjct: 35  ITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNN 94

Query: 331 Y 331
           +
Sbjct: 95  W 95


>gi|224825591|ref|ZP_03698696.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224602512|gb|EEG08690.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 237

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 51/95 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A P G++EAA A G++     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTVEIFAGAIRATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + +L +++LA      D++ V   + + T  + E
Sbjct: 167 VILMLHSTTLAFTATVPDILKVARDVNSATYASFE 201


>gi|167855355|ref|ZP_02478122.1| ArtM protein [Haemophilus parasuis 29755]
 gi|167853503|gb|EDS24750.1| ArtM protein [Haemophilus parasuis 29755]
          Length = 227

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 11/171 (6%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGST----VSPEFMSLYIALSCYTAAFIAEIVR 286
           G P LV    ++ L +  P  GQF +I  S     +S  +    + L+  ++A+   +  
Sbjct: 58  GTPLLV----QFFLIYAGP--GQFPWIVASPFWSLLSDAWFCAMLTLALNSSAYTTLLFH 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ E   ALGL+ R  T  +L+P A++  +P  +++ + + K +SLA  +  
Sbjct: 112 GAVKAIPKGQWETCAALGLS-RLQTLKILVPYALKRALPSYSNEIILVFKGTSLASTITI 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++     +      A+ I  +   +YL ++ ++ + + R+  K+   E+
Sbjct: 171 MDIMGYARQLYGTEYDALTIYGLAGVVYLVITGIMTVILRRVERKVLSFER 221


>gi|167841277|ref|ZP_02467961.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           thailandensis MSMB43]
          Length = 217

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%)

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  RSG  ++P G +EAA  LGL+  +    V LPQ +  I+P LT+  + L K +++ 
Sbjct: 105 AEAFRSGFRSIPPGHLEAAQCLGLSRWQTVWRVQLPQMLVLIVPALTNLTIVLSKETAVL 164

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
             V   +L  V   I ++T   +E +L+    YL+L
Sbjct: 165 SIVTVPELTFVLTGIGSETFAFVETLLVLCVCYLAL 200


>gi|300213989|gb|ADJ78405.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius CECT 5713]
          Length = 411

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 23/96 (23%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LPLL ++ F+  G+P+L                         T  P F++  I L+  
Sbjct: 331 RGLPLLVLALFIYNGIPSLT-----------------------GTKIPAFIAGIITLTLN 367

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             A+ A  V+ G+ AV +GQMEAA +LGL+  KA R
Sbjct: 368 EGAYTAAFVKGGIEAVDKGQMEAARSLGLSFGKAMR 403



 Score = 36.2 bits (82), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 34/66 (51%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T +L   G+I ATI G ++G   +  NK    +    + +FR +P LV+  F+Y
Sbjct: 284 LNGLWKTIYLTILGIIGATIFGIIIGFLGVIPNKFAQGVSTTVIYIFRGLPLLVLALFIY 343

Query: 150 KSVLSV 155
             + S+
Sbjct: 344 NGIPSL 349


>gi|224826828|ref|ZP_03699928.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224601048|gb|EEG07231.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 237

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 51/95 (53%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A P G++EAA A G++     R V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTVEIFAGAIRATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + +L +++LA      D++ V   + + T  + E
Sbjct: 167 VILMLHSTTLAFTATVPDILKVARDVNSATYASFE 201


>gi|218462905|ref|ZP_03502996.1| nopaline ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 136

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 49/81 (60%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   + + AEI R  + AV  GQ EAA ALGL++ +   L+++PQ +   +P   +  
Sbjct: 9   ALTVVFSGYAAEIFRGAINAVAPGQREAAAALGLSNAQIWFLIIIPQMIPIALPAFCNLC 68

Query: 332 LNLLKNSSLAVAVGFADLVSV 352
           ++L+K++SL   VG  D++ V
Sbjct: 69  ISLIKDTSLISVVGLTDVMRV 89


>gi|261867469|ref|YP_003255391.1| arginine transporter permease subunit ArtM [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412801|gb|ACX82172.1| arginine transport system permease protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 227

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 13/180 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYT 277
           LY++ F   G P LV    ++ L +  P  GQF +I  S     +S  +    + L+  +
Sbjct: 51  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWIVNSPLWSVLSNAWFCAALTLALNS 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+  ++    + A+P+ Q E+  ALGL+ R  T  +L+P A++  +P  +++ + + K 
Sbjct: 103 SAYSTQLFHGAVKAIPKVQWESCEALGLS-RLQTLKILIPYALKRALPSYSNEIILVFKG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++LA  +   D++     +      A+ I  I   IYL ++ +  L + RL  K+   E+
Sbjct: 162 TALASTITIMDIMGYARQLYGTDYDALTIYGIAGGIYLIITGIATLLLRRLENKVLAFER 221


>gi|126729222|ref|ZP_01745036.1| ABC transporter, permease protein, HisMQ family [Sagittula stellata
           E-37]
 gi|126710212|gb|EBA09264.1| ABC transporter, permease protein, HisMQ family [Sagittula stellata
           E-37]
          Length = 293

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G++ R+ T  +L+PQ     +P L++ ++ L+K 
Sbjct: 153 GAFAANVLFGAMRAVPRAQLETAEAYGMSPRQTTWRILVPQMWVYALPGLSNLWMVLIKA 212

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 213 TPLLFLLGVEDIV 225


>gi|260433179|ref|ZP_05787150.1| ABC transporter, permease protein, HisMQ family [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417007|gb|EEX10266.1| ABC transporter, permease protein, HisMQ family [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 598

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 5/110 (4%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    AF A ++  G+ AVP  Q+E A A G+T R+    +L+PQ     +P L++ 
Sbjct: 449 ITFSIVFGAFAANVLFGGMRAVPLAQLETAEAYGMTRRQTFWRILVPQMWVYALPGLSNL 508

Query: 331 YLNLLKNSSLAVAVGFADLV----SVGGTIINQ-TGQAIEIILIWMFIYL 375
           ++ L+K + L   +G  D+V     +GGT  ++ T        +W F++L
Sbjct: 509 WMVLIKATPLLFLLGVEDIVYWARELGGTKTSKFTAYPHGDWRMWYFLFL 558


>gi|332040047|gb|EGI76432.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 225

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 58/117 (49%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LSCY AA+ AE++R   + +P G ++AA A G    KA   ++LPQ +        + 
Sbjct: 96  IGLSCYYAAYYAEVLRGARLVLPSGSLDAAYAHGYRRGKAFLRIVLPQLVMRTRGESGNL 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  LK++S    +   +L +    + ++    +E  ++ + +Y +L I +   M R
Sbjct: 156 LIMCLKDTSFLGIITVTELTAAANAMSSRYFIPMEAFVLVLGLYWALGITVDALMRR 212


>gi|326803650|ref|YP_004321468.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650674|gb|AEA00857.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 229

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           YI       A + EI RS L+AV  GQ EAA++ GL+  K+   ++ PQ ++  +P   +
Sbjct: 103 YIIFCLIALASLTEIFRSALMAVDYGQWEAALSAGLSPWKSFERIIFPQLLKVALPSFIN 162

Query: 330 QYLNLLKNSSLAVAVGFAD 348
             + L+K +SL   +   D
Sbjct: 163 LIIELVKGTSLVFVMTVQD 181


>gi|328544438|ref|YP_004304547.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
 gi|326414180|gb|ADZ71243.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 272

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 47/80 (58%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +  T+A+ AEI+R  +  VPRGQ E A+ALGL        ++LPQA+   + P  ++ 
Sbjct: 147 AFTLNTSAYQAEILRGAVENVPRGQWEGAMALGLPRPVIFFRIILPQALIVALRPYGNEI 206

Query: 332 LNLLKNSSLAVAVGFADLVS 351
           + ++K S++A  V   DL+ 
Sbjct: 207 ILMIKGSAIASIVTIFDLMG 226


>gi|62179450|ref|YP_215867.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|62127083|gb|AAX64786.1| ABC superfamily (membrane), arginine 3rd transport system
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
          Length = 222

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 20/222 (9%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           TLT+ + A   V + V  I+L+L   F   L R             YI+ F   G P LV
Sbjct: 17  TLTVASIAVALVLALVFTIILTLKTPFVVWLVRG------------YITLFT--GTPLLV 62

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I L Y      P L ++  +      P   +L IALS  +AA+  ++    + A+P GQ
Sbjct: 63  QIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCAL-IALSLNSAAYTTQLFYGAIRAIPEGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA  +   +++     +
Sbjct: 122 CQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL 180

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 181 YGRTYDVV-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221


>gi|304415312|ref|ZP_07395997.1| membrane component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
 gi|304282830|gb|EFL91308.1| membrane component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
          Length = 222

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 16/219 (7%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           TLTM + +   VF+ +  ++L+L           KT     L+ I   L  G P LV I 
Sbjct: 17  TLTMVSLSLALVFALLFTLILTL-----------KTPLLTSLVRIYITLFTGTPLLVQIF 65

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI-AVPRGQME 298
           L Y      P + Q+ ++   T+S  ++   IAL+  +AA+       G + A+P GQ +
Sbjct: 66  LIYYGPGQFPSIQQYPWLW-HTLSQPWLCAMIALALNSAAYTTPYCFYGAVQAIPAGQWQ 124

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +  ALG++  ++ R +L P A++  +   +++ + + K++SL   +   D++     +  
Sbjct: 125 SCAALGMSSAQSMR-ILFPFAIKRSLSSYSNEVILVFKSTSLVYTITLMDIMGQSQMLYG 183

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK-IALKE 396
           +T   +  +     +YLS++ ++ L M  L  + +A +E
Sbjct: 184 RTYDVMVFVAA-GIVYLSINTLLTLLMRWLERRALAFEE 221


>gi|254477830|ref|ZP_05091215.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214028415|gb|EEB69251.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 250

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 15/163 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQLHFD---- 247
           +F +G+++ LF      +     G  L  LL I T +I  +P LVLI + Y +  D    
Sbjct: 42  AFGMGLIIGLFGA----YGKLYGGPVLRDLLAIYTTVIRAVPELVLILILYYVGTDLINK 97

Query: 248 -KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +G ++ +    +S     +++ L     A+  E++R  + AVP GQ+EAA A G+ 
Sbjct: 98  AATAMG-YDRV---EISGIVAGIWV-LGIVQGAYATEVLRGAIKAVPPGQIEAARAYGMP 152

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
                R V +P  M    P L + +L   K+++L   VGFA+L
Sbjct: 153 AFMTMRRVTIPAMMSFATPGLANLWLIATKDTALLAIVGFAEL 195


>gi|126667701|ref|ZP_01738669.1| amino acid ABC transporter [Marinobacter sp. ELB17]
 gi|126627804|gb|EAZ98433.1| amino acid ABC transporter [Marinobacter sp. ELB17]
          Length = 217

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 66/133 (49%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +   + L  +  A+ A+I  + + +V  GQ EA+ ++G  H      +++PQA    
Sbjct: 85  PAILVGILGLGFHYMAYNADIFIATIKSVSGGQYEASRSIGFGHVATIFYIIVPQAFIRA 144

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP L +  + ++K++S+  A+G A+LV      I+ T +  E  ++   +Y  ++I + L
Sbjct: 145 IPQLGNNMILMVKDTSVLSAIGVAELVHASQYAISVTFRPFEFFIVIALLYYVINIFMEL 204

Query: 384 FMNRLNAKIALKE 396
               L  + A + 
Sbjct: 205 GQAWLERQTAYRR 217


>gi|307132038|ref|YP_003884054.1| glutamine transport system permease [Dickeya dadantii 3937]
 gi|306529567|gb|ADM99497.1| Glutamine transport system permease protein [Dickeya dadantii 3937]
          Length = 233

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 76/156 (48%), Gaps = 14/156 (8%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F   +++ L    L R       KAL  L    F+   +P L+ + L Y   F  P  G 
Sbjct: 28  FTSALIIGLTVAVLRRLAFPSMKKALDFL---VFVFRSIPVLIAVFLVY---FGLPATGL 81

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                  ++SP  +++ I++   +  ++AE+ R  L  V + ++ AA A GL+  +  R 
Sbjct: 82  -------SISP-LLAMNISIGLISGGYLAEVFRGALQLVEQSEITAAKAAGLSKLQIIRH 133

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           + +PQ  R  +P + +++ ++LK+S  A  VG +++
Sbjct: 134 IEIPQMFRFSVPGILNEFSSVLKSSPFAYTVGISEI 169


>gi|218678696|ref|ZP_03526593.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 101

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%)

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA+A+GLT  +    ++ P  MR+++P L+S  ++L K++SLA A+   +L      I 
Sbjct: 3   EAALAIGLTGMQIRSSIIAPLMMRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKIN 62

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            ++ + IE  ++   +Y+    +IA  M  +  ++AL
Sbjct: 63  VESFRVIETWMVTSALYVVTCFLIAAVMRFIERRLAL 99


>gi|149202783|ref|ZP_01879755.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
 gi|149144065|gb|EDM32099.1| binding-protein-dependent transport systems inner membrane
           component [Roseovarius sp. TM1035]
          Length = 293

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR QME A A G+T R+A   +++PQ     +P L + ++ L+K 
Sbjct: 153 GAFAANVLFGAMRAVPRAQMETAEAYGMTRRQAFWRIMVPQMWVYALPGLGNLWMVLIKA 212

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 213 TPLLFLLGVEDIV 225


>gi|126735295|ref|ZP_01751041.1| arginine/histidine-ABC transporter, permease protein [Roseobacter
           sp. CCS2]
 gi|126715850|gb|EBA12715.1| arginine/histidine-ABC transporter, permease protein [Roseobacter
           sp. CCS2]
          Length = 294

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 10/125 (8%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVP+GQ+E A A G++ R+    VL+PQ     +P L++ ++ L+K 
Sbjct: 153 GAFAANVLFGAMRAVPKGQLETAEAYGMSRRQTFWRVLVPQMWVYALPGLSNLWMVLIKA 212

Query: 338 SSLAVAVGFADLV----SVGGTIINQ-TGQAIEIILIWMF-----IYLSLSIMIALFMNR 387
           + L   +G  D+V     +GG    Q T        +W F      YL  + +  + +++
Sbjct: 213 TPLLFLLGVEDIVYWARELGGAKQPQFTDYPHPDWRMWYFAALLVFYLCFTKVSEVVLDK 272

Query: 388 LNAKI 392
           + AK+
Sbjct: 273 IMAKL 277


>gi|291518762|emb|CBK73983.1| ABC-type amino acid transport system, permease component
           [Butyrivibrio fibrisolvens 16/4]
          Length = 119

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSG+ A+P  Q E+A +LG++  +    ++LPQA+   +P L +  + LLK +S+  
Sbjct: 3   ETFRSGVEAIPNIQTESAASLGMSKFQILWHIILPQAITISVPGLLANVIFLLKETSVFS 62

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            +   DL+     +I    + IE + + +  YL
Sbjct: 63  TISLMDLMFTAKDLIGMYAKTIECLFLLVVFYL 95


>gi|170695395|ref|ZP_02886541.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139795|gb|EDT07977.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 175

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 35/47 (74%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           S  +A S + AA+ +EI+R+G+ +VPRGQ+ A+ ALG+ + ++ RLV
Sbjct: 99  SAMVAFSLFEAAYYSEIIRAGIQSVPRGQVNASFALGMNYAQSMRLV 145


>gi|330938796|gb|EGH42321.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 169

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 46/74 (62%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +T+A++AEI R  + ++ +GQ EA+ +L LT  +  R V+LPQA+R  + P     + 
Sbjct: 93  TLFTSAYLAEIWRGCVESISKGQWEASASLALTPFEQMRYVILPQALRIAVAPTVGFSVQ 152

Query: 334 LLKNSSLAVAVGFA 347
           ++K +++   + F+
Sbjct: 153 VVKGTAVTSIIRFS 166


>gi|323526381|ref|YP_004228534.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383383|gb|ADX55474.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 237

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 12/170 (7%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-----FMSLYIALSCYTAAF 280
           T++  G P  V + L Y        +  F FI    ++       F    +A S  T A+
Sbjct: 63  TYIFRGTPLYVQLLLIYT------GIYSFEFIRSREITDAIFRSGFYCAIMAFSLNTCAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI    + ++  G++EAA A G+      R +++P A+R  +P  +++ + +L  +S+
Sbjct: 117 TTEIFAGAMRSMSHGEVEAARAYGMDGITLYRRIIIPSALRRSLPLYSNEVILMLHATSV 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALFMNRLN 389
           A      D++ V     + T Q+ +   I   +YL++S+ ++A+F    N
Sbjct: 177 AFTATVPDILKVARDANSATYQSFQAFGIAALLYLTISLALVAIFRRAEN 226


>gi|227820776|ref|YP_002824746.1| putative amino acid ABC transporter, inner membrane component
           [Sinorhizobium fredii NGR234]
 gi|227339775|gb|ACP23993.1| putative amino acid ABC transporter, inner membrane component
           [Sinorhizobium fredii NGR234]
          Length = 274

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 47/89 (52%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   AA+  E++R     VP+G++EAA A G+      R + LP+A+   +P L  + 
Sbjct: 149 ALTLSFAAYEGEVMRGAFAGVPQGELEAARAYGMGRWTTFRRIWLPRAVHRALPTLNGET 208

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +  LK++ L   +   D+ +V   +  +T
Sbjct: 209 VLQLKSTPLVATITVVDVYAVISKVRQET 237


>gi|114707668|ref|ZP_01440563.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536912|gb|EAU40041.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
          Length = 269

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 10/165 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SFV G +LS+      R    +T +    L++  F   G P +  I L Y  +     
Sbjct: 67  VSSFVCGAILSV-PIAFGRMAESRTARVPSFLFVYFFR--GTPLIAQIFLVY--YGFGEF 121

Query: 251 LGQFNFIGGSTVSPE--FMSLY-IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            G  + IG      E  F +L+ IAL+  +AA+ AEI+R  + +VP+GQ E   +LG++ 
Sbjct: 122 RGFLDSIGLWWFFREAWFCALFTIALN--SAAYQAEILRGAIESVPKGQWEGGRSLGISR 179

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
                 ++LPQAM   + P  ++ + L+K S++   +   DL  +
Sbjct: 180 SVIFSRIVLPQAMIVALRPYANELILLIKGSAIVAIITVYDLFGI 224


>gi|307702006|ref|ZP_07639014.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus mitis NCTC 12261]
 gi|307616651|gb|EFN95840.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus mitis NCTC 12261]
          Length = 266

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVG----FADLVSVGG 354
           +SLA + G    FA    +GG
Sbjct: 195 TSLAFSAGVVEVFAQAQILGG 215


>gi|92112289|ref|YP_572217.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795379|gb|ABE57518.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 221

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+ Y   + AEI R   +  P GQ+EAA A G T  K    ++LPQ +    P + +Q 
Sbjct: 93  ALAVYHGMYFAEIFRGNRLTFPPGQIEAAKAHGFTKGKMFFRLILPQVIMQTRPLMGNQL 152

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN---RL 388
           +  LK+++  V +   +L +   ++ +      E  ++ +  Y +LS+ + + +    R 
Sbjct: 153 IYALKDTAFLVIITVRELTAAANSLSSTYFIPTEAFIVVIGFYWALSVAMEIIIKQCGRF 212

Query: 389 NAK 391
            AK
Sbjct: 213 GAK 215


>gi|306832866|ref|ZP_07466000.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304425005|gb|EFM28137.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 267

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 4/131 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAIQAVNIGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINSL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG+      + I + L++  I + +  +  L   R
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIEQIGRLIEKR 249

Query: 388 LNAKIALKEKK 398
           ++       +K
Sbjct: 250 MDIDTPQSSQK 260


>gi|300716052|ref|YP_003740855.1| Arginine 3rd transport system permease protein [Erwinia billingiae
           Eb661]
 gi|299061888|emb|CAX59004.1| Arginine 3rd transport system permease protein [Erwinia billingiae
           Eb661]
          Length = 222

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P +    ++      P   +L +ALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSIQAIPWLWHLLSQPWLCAL-LALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ E+  ALG+ +RK T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAMRAIPAGQWESCAALGM-NRKETLRILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +++  G  +  +T   + +      IYL ++ ++ L M  +  +    E++
Sbjct: 167 TITLMEVMGHGQLLYGRTYD-VTVFAAAGLIYLCVNGLLTLMMRIIERRALAFERR 221


>gi|161503950|ref|YP_001571062.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865297|gb|ABX21920.1| hypothetical protein SARI_02042 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 222

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           TLT+ + A   V + V  I+L+L   F   L R             YI+ F   G P LV
Sbjct: 17  TLTVASIAVALVLALVFTIILTLKTPFMVWLVRG------------YITLFT--GTPLLV 62

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I L Y      P L ++  +      P   +L IALS  +AA+  ++    + A+P GQ
Sbjct: 63  QIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCAL-IALSLNSAAYTTQLFYGAIRAIPEGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA  +   +++     +
Sbjct: 122 WQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL 180

Query: 357 INQT 360
             +T
Sbjct: 181 YGRT 184


>gi|307709001|ref|ZP_07645461.1| L-cystine transport system permease protein tcyB [Streptococcus
           mitis SK564]
 gi|307620337|gb|EFN99453.1| L-cystine transport system permease protein tcyB [Streptococcus
           mitis SK564]
          Length = 266

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVG----FADLVSVGG 354
           +SLA + G    FA    +GG
Sbjct: 195 TSLAFSAGVVEVFAQAQILGG 215


>gi|317054117|ref|YP_004118142.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952112|gb|ADU71586.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 230

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 17/205 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +FV+ ++L+L     +R    +  + L  LY +TF   G P L+ + L Y        L 
Sbjct: 31  AFVISVLLAL-----ARDSAPRPLRGLIFLYTTTFR--GTPLLIQLFLIYY------GLA 77

Query: 253 QFNFIGGSTVSPEFMS----LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           QF+ +  S + P   S    + +A    TAA+  EI   GL  +P G++EAA A G+++ 
Sbjct: 78  QFDLLRASFLWPWLSSPLICVLLAFILNTAAYTTEIFAGGLRHLPAGEIEAARAFGMSYP 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R +L P  +   +    ++ + +L  +SLA  V   ++  V   I        E  +
Sbjct: 138 TLARRILFPAMLSRSLSLYGNETIMMLHATSLASTVTLMEVTGVARNISLNYYIQFEPYV 197

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIA 393
               IYL L++ + L    L  + A
Sbjct: 198 TAGAIYLVLTLSLVLAFRYLEKRYA 222


>gi|330501279|ref|YP_004378148.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328915565|gb|AEB56396.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 221

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 56/101 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +  +A+     A+  EI+R+G+ A+P GQ+EAA AL ++  +  R V+L  A+  + 
Sbjct: 89  EWEAAILAMVINLGAYSTEIIRAGIQAIPHGQLEAASALAMSRFETFRHVVLRPALGKVW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           P L+SQ + ++  S++   +   +L      I ++  +A E
Sbjct: 149 PALSSQIIIVMLGSAVCSQISTEELSFAANFIQSRNFRAFE 189


>gi|169842389|ref|ZP_02875494.1| Predicted amino acid ABC transporter, permease protein [candidate
           division TM7 single-cell isolate TM7a]
          Length = 58

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 35/48 (72%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           AA++ EI+RSG+ ++ +GQ EAA  LG ++ +    V+LPQA+R ++P
Sbjct: 10  AAYLVEIMRSGIESIDKGQHEAAKVLGYSYWQKIIYVILPQAIRRVLP 57


>gi|15901311|ref|NP_345915.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15903358|ref|NP_358908.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|111658102|ref|ZP_01408801.1| hypothetical protein SpneT_02000710 [Streptococcus pneumoniae
           TIGR4]
 gi|116515947|ref|YP_816756.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|148984803|ref|ZP_01818056.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148990269|ref|ZP_01821480.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|148992655|ref|ZP_01822323.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|148997480|ref|ZP_01825085.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149002856|ref|ZP_01827782.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|149007268|ref|ZP_01830926.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|149011689|ref|ZP_01832885.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|149019406|ref|ZP_01834768.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483927|ref|ZP_02708879.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC1873-00]
 gi|168486158|ref|ZP_02710666.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC1087-00]
 gi|168489622|ref|ZP_02713821.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae SP195]
 gi|168492530|ref|ZP_02716673.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC0288-04]
 gi|168493362|ref|ZP_02717505.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC3059-06]
 gi|168575918|ref|ZP_02721833.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae MLV-016]
 gi|169833994|ref|YP_001694877.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae Hungary19A-6]
 gi|182684418|ref|YP_001836165.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|221232186|ref|YP_002511339.1| ABC transporter permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225854902|ref|YP_002736414.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae JJA]
 gi|225857087|ref|YP_002738598.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae P1031]
 gi|225859222|ref|YP_002740732.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae 70585]
 gi|225860770|ref|YP_002742279.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649578|ref|ZP_04523830.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CCRI 1974]
 gi|237821542|ref|ZP_04597387.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CCRI 1974M2]
 gi|289168215|ref|YP_003446484.1| ABC transporter membrane-spanning permease-aspartate/glutamate
           transport [Streptococcus mitis B6]
 gi|298230956|ref|ZP_06964637.1| ABC transporter membrane-spanning permease-aspartate/glutamate
           transport [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254980|ref|ZP_06978566.1| ABC transporter membrane-spanning permease-aspartate/glutamate
           transport [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502585|ref|YP_003724525.1| amino acid ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|303254998|ref|ZP_07341075.1| ABC transporter permease protein [Streptococcus pneumoniae BS455]
 gi|303261737|ref|ZP_07347684.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264410|ref|ZP_07350330.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303266758|ref|ZP_07352640.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303269183|ref|ZP_07354961.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|307068111|ref|YP_003877077.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|307126969|ref|YP_003879000.1| aspartate/glutamate ABC transporter membrane-spanning permease
           [Streptococcus pneumoniae 670-6B]
 gi|307706929|ref|ZP_07643728.1| L-cystine transport system permease protein tcyB [Streptococcus
           mitis SK321]
 gi|14972950|gb|AAK75555.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15458959|gb|AAL00119.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae R6]
 gi|116076523|gb|ABJ54243.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|147756535|gb|EDK63576.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147759150|gb|EDK66144.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147761072|gb|EDK68040.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147764120|gb|EDK71052.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147922825|gb|EDK73941.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147924408|gb|EDK75498.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147928672|gb|EDK79686.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|147931276|gb|EDK82255.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168996496|gb|ACA37108.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae Hungary19A-6]
 gi|172042784|gb|EDT50830.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC1873-00]
 gi|182629752|gb|ACB90700.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|183570798|gb|EDT91326.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC1087-00]
 gi|183571922|gb|EDT92450.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae SP195]
 gi|183573271|gb|EDT93799.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC0288-04]
 gi|183576607|gb|EDT97135.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC3059-06]
 gi|183578205|gb|EDT98733.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae MLV-016]
 gi|220674647|emb|CAR69216.1| ABC transporter permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225720038|gb|ACO15892.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae 70585]
 gi|225724222|gb|ACO20075.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae JJA]
 gi|225726278|gb|ACO22130.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae P1031]
 gi|225727706|gb|ACO23557.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae Taiwan19F-14]
 gi|288907782|emb|CBJ22622.1| ABC transporter membrane-spanning permease-aspartate/glutamate
           transport [Streptococcus mitis B6]
 gi|298238180|gb|ADI69311.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
 gi|301794485|emb|CBW36924.1| ABC transporter permease protein [Streptococcus pneumoniae INV104]
 gi|301800311|emb|CBW32937.1| ABC transporter permease protein [Streptococcus pneumoniae OXC141]
 gi|301802189|emb|CBW34935.1| ABC transporter permease protein [Streptococcus pneumoniae INV200]
 gi|302598005|gb|EFL65074.1| ABC transporter permease protein [Streptococcus pneumoniae BS455]
 gi|302637317|gb|EFL67805.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302641307|gb|EFL71676.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302643747|gb|EFL74012.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646222|gb|EFL76449.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|306409648|gb|ADM85075.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|306484031|gb|ADM90900.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae 670-6B]
 gi|307617643|gb|EFN96811.1| L-cystine transport system permease protein tcyB [Streptococcus
           mitis SK321]
 gi|332072255|gb|EGI82738.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332073798|gb|EGI84276.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
 gi|332074213|gb|EGI84690.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 266

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVG----FADLVSVGG 354
           +SLA + G    FA    +GG
Sbjct: 195 TSLAFSAGVVEVFAQAQILGG 215


>gi|304397039|ref|ZP_07378918.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355188|gb|EFM19556.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 222

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 3/171 (1%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L  G P LV I L Y      P + Q  ++    +S  ++   +ALS  +AA+  ++   
Sbjct: 54  LFTGTPLLVQIFLIYYGPGQFPSIQQIPWLW-HLLSQPWLCAMLALSLNSAAYTTQLFYG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+P GQ ++  ALG+  RK T  +LLP A +  +   +++ + + K +SLA  +   
Sbjct: 113 AVRAIPSGQWQSCAALGM-GRKDTLRILLPYAFKRALSSYSNEVVLVFKGTSLAYTITLM 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +++  G  +  +T   I +      IYL ++ ++ L M  +  +    E++
Sbjct: 172 EVMGHGQLLYGRT-YDITVYAAAGLIYLCVNGLLTLMMRLIERRALAFERR 221


>gi|322376912|ref|ZP_08051405.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282719|gb|EFX59726.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|327389646|gb|EGE87991.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 266

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVG----FADLVSVGG 354
           +SLA + G    FA    +GG
Sbjct: 195 TSLAFSAGVVEVFAQAQILGG 215


>gi|117618047|ref|YP_855200.1| arginine transporter permease subunit ArtM [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117559454|gb|ABK36402.1| arginine ABC transporter, permease protein ArtM [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 220

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 14/195 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++  FS +LG+   L A  ++     +      L+ +   +  G P L+ I L Y     
Sbjct: 17  QLTAFSLLLGV---LMAAAMTWVLERRIPVVTQLVQLWVLIFTGTPLLIQIFLIYY---- 69

Query: 248 KPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            P  GQF ++    + P     +    +AL   TAA+   + +  L A+P G++EA  AL
Sbjct: 70  GP--GQFAWLKEGPLWPLLKQPWFCAVLALGFNTAAYSTRLFKGALDAIPAGEVEACRAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +  + T  + +  A R ++P  +++ + +LK SSLA  +   D++ +   +  QT   
Sbjct: 128 GFSAGQ-TLWMKVRHAARRLVPAYSNEVILVLKGSSLASTITIMDVMGLAQRLNAQTYDT 186

Query: 364 IEIILIWMFIYLSLS 378
           + +  +   +YL+++
Sbjct: 187 LAVFTVAGALYLTMN 201


>gi|194398452|ref|YP_002038094.1| amino acid ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194358119|gb|ACF56567.1| amino acid ABC transporter, permease protein, putative
           [Streptococcus pneumoniae G54]
          Length = 266

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 44/72 (61%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVGFADL 349
           +SLA + G  ++
Sbjct: 195 TSLAFSAGVVEV 206


>gi|119866937|ref|YP_936889.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|119693026|gb|ABL90099.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 533

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL AV   Q++AA ++GL+       + LPQA+R I P L S+ +  +KN+SLA 
Sbjct: 104 EIFRGGLNAVNVSQIDAARSIGLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLAS 163

Query: 343 AVGFADL 349
           A+  A+L
Sbjct: 164 AIAVAEL 170


>gi|307945342|ref|ZP_07660678.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Roseibium sp. TrichSKD4]
 gi|307771215|gb|EFO30440.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Roseibium sp. TrichSKD4]
          Length = 303

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 48/86 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F  +  A +  TAA+ AEI+R  +  V RGQ E A ALGL+       ++LPQA+   + 
Sbjct: 172 FYCVVFAFTLNTAAYQAEILRGAVQNVARGQWEGAAALGLSKPVTFFKIILPQALIVALR 231

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVS 351
           P  ++ + ++K S++A  V   D+ +
Sbjct: 232 PYGNEIILMIKGSAIAAIVTVFDMFA 257


>gi|259418482|ref|ZP_05742400.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
 gi|259345877|gb|EEW57721.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
          Length = 268

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 7/110 (6%)

Query: 254 FNFIGGSTVSPEFMSL-------YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           F F+   +VSP F +L        I L   T+A+ AEI    L ++P+G +EAA A GL+
Sbjct: 97  FVFLSLKSVSPIFDALSAAWLGALIVLFLNTSAYSAEIFYGALRSIPKGDLEAADAYGLS 156

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
                R V+ P  MR   P  T++ + L   ++L    GF      G  +
Sbjct: 157 GWSRFRRVIWPTMMRLAWPSYTNEAIFLFHATTLVFFSGFPAWRQKGDAL 206


>gi|220914864|ref|YP_002490172.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219952615|gb|ACL63005.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 278

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 42/78 (53%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P++    +A +      I+EI+R  + ++P GQ E+A  L  T  +  R ++LPQ +R  
Sbjct: 143 PDWSKATLAFALPVMGNISEILRGAVRSIPSGQWESAEGLAFTRAQTLRYIILPQCVRRC 202

Query: 324 IPPLTSQYLNLLKNSSLA 341
           IPP  + Y  L  ++ +A
Sbjct: 203 IPPWMNWYAMLTLSTPMA 220


>gi|330946907|gb|EGH47744.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. pisi str. 1704B]
          Length = 78

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 46/68 (67%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++  
Sbjct: 1   EILRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVS 60

Query: 343 AVGFADLV 350
           AV   +++
Sbjct: 61  AVAVPEIL 68


>gi|167586677|ref|ZP_02379065.1| histidine transport system permease protein [Burkholderia ubonensis
           Bu]
          Length = 237

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G+T       V+LP A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMTPFTMYCRVILPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   I   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRR 223


>gi|108797843|ref|YP_638040.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|108768262|gb|ABG06984.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Mycobacterium sp. MCS]
          Length = 532

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL AV   Q++AA ++GL+       + LPQA+R I P L S+ +  +KN+SLA 
Sbjct: 103 EIFRGGLNAVNVSQIDAARSIGLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLAS 162

Query: 343 AVGFADL 349
           A+  A+L
Sbjct: 163 AIAVAEL 169


>gi|307705181|ref|ZP_07642053.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|307621266|gb|EFO00331.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 202

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 71  AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 130

Query: 338 SSLAVAVG----FADLVSVGG 354
           +SLA + G    FA    +GG
Sbjct: 131 TSLAFSAGVVEVFAQAQILGG 151


>gi|24378948|ref|NP_720903.1| putative amino acid ABC transporter, permease [Streptococcus mutans
           UA159]
 gi|290581034|ref|YP_003485426.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24376835|gb|AAN58209.1|AE014892_2 putative amino acid ABC transporter, permease [Streptococcus mutans
           UA159]
 gi|254997933|dbj|BAH88534.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 267

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 11/165 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  P+L       +G+P L+L AL  ++  D      FN        P  +    A +  
Sbjct: 84  RGTPILVQLMLTYYGIP-LLLKALNQKMGTD------FNI----NAIPASVFAITAFAFN 132

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ +E +R+ + +V  G++EAA +LG+T  +  R V++P A     P L +  + L K
Sbjct: 133 EAAYTSETIRAAIQSVNSGEIEAAKSLGMTTAQVYRRVIIPNAAVVATPTLINTLIGLTK 192

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +SLA   G  ++ +    +     +  E  +    IY  +SI+I
Sbjct: 193 GTSLAFNAGIVEMFAQAQILGGSDYRYFERFISVAIIYWGVSIII 237


>gi|330815910|ref|YP_004359615.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
 gi|327368303|gb|AEA59659.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia gladioli BSR3]
          Length = 217

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+  +A FIA +V + L  V RG +EAA+A+G T R+    VLLP+A   I+  LT  
Sbjct: 94  VPLTLASAPFIARLVETALREVDRGLIEAALAMGATTRQIVFKVLLPEAWPGIVAGLTIT 153

Query: 331 YLNLLKNSSL 340
           +++L+  S++
Sbjct: 154 FVSLVGYSAM 163


>gi|191637274|ref|YP_001986440.1| Putative amino acid ABC transporter, permease protein
           [Lactobacillus casei BL23]
 gi|227533180|ref|ZP_03963229.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239629433|ref|ZP_04672464.1| polar amino acid ABC transporter [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|190711576|emb|CAQ65582.1| Putative amino acid ABC transporter, permease protein
           [Lactobacillus casei BL23]
 gi|227189194|gb|EEI69261.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239528119|gb|EEQ67120.1| polar amino acid ABC transporter [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|327381314|gb|AEA52790.1| Putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Lactobacillus casei LC2W]
 gi|327384485|gb|AEA55959.1| Putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Lactobacillus casei BD-II]
          Length = 222

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 78/156 (50%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +I + Y L+F  P L      G     P  +    AL+ +++A+  E  R+   A+   Q
Sbjct: 63  MIVVLYILYFALPNLTTVLNGGKGLHIPATVVAVAALALFSSAYFGETFRAAYQALDPAQ 122

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA+A GL+ R A + ++LPQA    +P + +  ++++K +++   +G  ++      +
Sbjct: 123 LEAALASGLSKRTAMKRIVLPQAAALALPNVFNSVMDIVKGTAIIYNIGLLEITGTSILV 182

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++T Q I   L    IYL L  +++   + +  ++
Sbjct: 183 GSKTYQFIPAYLAAWTIYLVLYWLVSAIFHLIKRQV 218


>gi|238026549|ref|YP_002910780.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
 gi|237875743|gb|ACR28076.1| Binding-protein-dependent transport systems inner membrane
           component [Burkholderia glumae BGR1]
          Length = 217

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+  +A FIA +V + L  V RG +EAA+A+G T R+    VLLP+A   I+  LT  
Sbjct: 94  VPLTIASAPFIARLVETALREVDRGLIEAALAMGATTRQIVFKVLLPEAWPGIVAGLTIT 153

Query: 331 YLNLLKNSSL 340
           +++L+  S++
Sbjct: 154 FVSLVGYSAM 163


>gi|126433483|ref|YP_001069174.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126233283|gb|ABN96683.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 533

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL AV   Q++AA ++GL+       + LPQA+R I P L S+ +  +KN+SLA 
Sbjct: 104 EIFRGGLNAVNVSQIDAARSIGLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLAS 163

Query: 343 AVGFADL 349
           A+  A+L
Sbjct: 164 AIAVAEL 170


>gi|319779070|ref|YP_004129983.1| Histidine ABC transporter, permease protein HisM [Taylorella
           equigenitalis MCE9]
 gi|317109094|gb|ADU91840.1| Histidine ABC transporter, permease protein HisM [Taylorella
           equigenitalis MCE9]
          Length = 231

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 28/200 (14%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S ++GI +S+    LS     KT    PL+    F   G P LV +   Y  +F  P +G
Sbjct: 28  SVIIGICISI---PLSVMLQRKTIFT-PLIKAYVFFFTGSPLLVQL---YIFYFGIPSIG 80

Query: 253 QFNFIGGSTVSP--EFMS-----LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              FI      P  EF+      ++ AL   T A+  +I    +  + R ++EAA A G+
Sbjct: 81  ---FIQDLMQQPGFEFLKDGKIYIFAALGLNTGAYTTQIFSGSIQNMDRKELEAAYAYGM 137

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----- 360
             +   R V+LP ++R  +P  +++ L  +  +SLA  V   + V+   ++ N T     
Sbjct: 138 DRKLTMRRVILPSSLRRALPAYSNEVLMTIHATSLASTVTINE-VTNAASLFNSTFYEPF 196

Query: 361 -----GQAIEIILIWMFIYL 375
                   I + L + FIYL
Sbjct: 197 IAYTAAGIIYLCLTFSFIYL 216


>gi|213584785|ref|ZP_03366611.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
          Length = 145

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 18/130 (13%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  +LG VL+L   R+S  +  +    L   YIS F   G P   LIA  + +++  P  
Sbjct: 32  FGLLLGFVLALM--RMSPLWPVRW---LARFYISIFR--GTP---LIAQLFMIYYGLP-- 79

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF    G  + P   +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  
Sbjct: 80  -QF----GIELDP-IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTL 133

Query: 312 RLVLLPQAMR 321
           R  +LPQA R
Sbjct: 134 RRAILPQAAR 143



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 8/103 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSV----LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +    + + PIP   I    G+ LN    +  TL    +A
Sbjct: 75  YYGLPQFGIELDPIPAAMI----GLSLNTAAYTSETLRAAISA 113


>gi|315639993|ref|ZP_07895120.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484255|gb|EFU74724.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 226

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  L  V  GQ +A  ALG ++ +  R V+ PQA  + +P L +  +++LK +SL  
Sbjct: 109 EIYRGALAGVDSGQRDAGYALGFSYYQLMRQVIFPQAFVTTVPALGNVAMDVLKGTSLTA 168

Query: 343 AVGFADLVS----VGG 354
            +   D+      VGG
Sbjct: 169 MISVPDIFQLAKIVGG 184


>gi|309804833|ref|ZP_07698895.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Lactobacillus iners
           LactinV 09V1-c]
 gi|308165772|gb|EFO67993.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Lactobacillus iners
           LactinV 09V1-c]
          Length = 437

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 29/37 (78%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +S  T A++AE++R G+I+ P+GQ EAA ALG++H +
Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQ 426



 Score = 36.2 bits (82), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134
           Y   IL G + T +L+  G I    IG LVG  R              KL+ W+  VYVE
Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPISKVKYWLLKLINWLLAVYVE 354

Query: 135 VFRNIPPLVVIFFLY 149
           +FR  P +V    +Y
Sbjct: 355 IFRGTPMMVQAAVIY 369


>gi|260582107|ref|ZP_05849901.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae NT127]
 gi|260094739|gb|EEW78633.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae NT127]
          Length = 227

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 19/183 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA-- 279
           LY++ F   G P LV    ++ L +  P  GQF +I     SP +  L  A  C   A  
Sbjct: 51  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWI---IDSPLWYVLSNAWFCAALALA 99

Query: 280 -----FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
                +  ++    + A+P+GQ E+  ALGL+ R  T  +L+P A++  +P  +++ + +
Sbjct: 100 LNSAAYSTQLFHGAVKAIPKGQWESCAALGLS-RLQTLKILIPYALKRALPSYSNEIILV 158

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            K ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+  
Sbjct: 159 FKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLA 218

Query: 395 KEK 397
            E+
Sbjct: 219 FER 221


>gi|309804119|ref|ZP_07698200.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Lactobacillus iners
           LactinV 11V1-d]
 gi|308163887|gb|EFO66153.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Lactobacillus iners
           LactinV 11V1-d]
          Length = 437

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 29/37 (78%)

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +S  T A++AE++R G+I+ P+GQ EAA ALG++H +
Sbjct: 390 ISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQ 426



 Score = 36.2 bits (82), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 10/75 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVE 134
           Y   IL G + T +L+  G I    IG LVG  R              KL+ W+  VYVE
Sbjct: 295 YGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYVE 354

Query: 135 VFRNIPPLVVIFFLY 149
           +FR  P +V    +Y
Sbjct: 355 IFRGTPMMVQAAVIY 369


>gi|186474523|ref|YP_001863494.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184198482|gb|ACC76444.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 236

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 11/169 (6%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTA 278
           I T+++ G P  V + L Y        + +F F+    +        F    +A +  T 
Sbjct: 61  IYTYVLRGTPLYVQLLLVYT------GIYRFEFVRSHQMLEAFFRSGFHCAILAFALNTC 114

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++ E+    + A P G++EAA A G+   K  R V++P A+R  +P  +++ + +L  +
Sbjct: 115 AYMTEMFAGAIRATPYGEVEAARAYGMNWLKMYRRVIVPSALRRALPSYSNEVILMLHAT 174

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++A      D++ V     + T  + E   +    Y+++S  +     R
Sbjct: 175 TVAFTATVPDMLKVARDANSATYHSFEAFGLAALTYVAVSFTLVAAFRR 223


>gi|261415439|ref|YP_003249122.1| binding-protein-dependent transport systems inner membrane
           component [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371895|gb|ACX74640.1| binding-protein-dependent transport systems inner membrane
           component [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302326945|gb|ADL26146.1| putative D-methionine transport system permease protein MetI
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 228

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 43/70 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS   A FIA +  + L  V +G ++AA+A+G + R+  R VL+P+A+ SII  +T  
Sbjct: 93  IPLSIAAAPFIARLTETALNEVDKGVIQAAVAMGASKRQVVRKVLIPEALPSIISGVTLT 152

Query: 331 YLNLLKNSSL 340
            + L+  S++
Sbjct: 153 IITLIGYSAM 162


>gi|170699699|ref|ZP_02890735.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170135399|gb|EDT03691.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 244

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   ++L     A++ +I R+ LI VP GQ+EAA A G+   +    + LP A R  +P
Sbjct: 108 FIVAALSLGFIQGAYLTDIFRAALINVPVGQIEAAHAYGMRPWQTLTRIRLPIAARLALP 167

Query: 326 PLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            + + +LN  K++S    +G F DL+         T   +   L+   ++L LSIM
Sbjct: 168 GVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHYVFFYLVTAALFLLLSIM 223


>gi|134295206|ref|YP_001118941.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138363|gb|ABO54106.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 237

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 59/117 (50%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  T A+  EI    + A+P G++EAA A G++     R V++P A+R  +P  +++
Sbjct: 107 LAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYGMSPFTMYRRVIVPSALRRALPLYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L  +++A      D++ V     + T  A +   +   IYL++S  +     R
Sbjct: 167 VILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGLAALIYLAVSFALVAAFRR 223


>gi|332160645|ref|YP_004297222.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604515|emb|CBY26013.1| amino acid ABC transporter, permease protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664875|gb|ADZ41519.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 227

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 24/134 (17%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP L L          K   GQ              +  +A++    A+  EI+R
Sbjct: 80  FIVFGLPALGL----------KLSAGQ--------------AAVLAMTINLGAYSTEIIR 115

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A  +GQ EA   LGL+  +    V+LP +++ I P L SQ + ++  S++   V F
Sbjct: 116 AGIQASAKGQWEAGRVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSF 175

Query: 347 ADLVSVGGTIINQT 360
            +L      I ++T
Sbjct: 176 EELTFAANLIQSRT 189


>gi|238750616|ref|ZP_04612116.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
 gi|238711264|gb|EEQ03482.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
          Length = 198

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 11/134 (8%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +LI G P L  +A+ Y   F  P +G    +  S +    +SL I    Y++A+  EI R
Sbjct: 41  WLIRGTPYLAQLAVFY---FGLPAIG----LTLSAIEATVLSLAI----YSSAYFGEIFR 89

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +   ++  GQ+EAA    ++   +   +  PQA R  +P L +Q++  +K S++A  +  
Sbjct: 90  TAWKSIGHGQLEAAQVHDISAWYSFWYIQTPQAWRFSLPLLGNQFILTIKESAVASIITV 149

Query: 347 ADLVSVGGTIINQT 360
            +L    G I+  T
Sbjct: 150 PELTMTTGQIVANT 163


>gi|238762602|ref|ZP_04623572.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
 gi|238699247|gb|EEP91994.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
          Length = 231

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 30/183 (16%)

Query: 186 NAKIFVFSFVLGIVLSL--------------FATRLSRHFHEKTGKALPLLYISTFLIF- 230
            AK+F+ S V G++L+L              +  R   +F   T      LY+   LI+ 
Sbjct: 18  TAKLFLLSVVPGLLLALVMAIGQAFGPRPLAWLIRSVTYFFRSTP-----LYLQLMLIYY 72

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GL    ++ L +Q   D+P    F     +T         +AL   T+A++AE++   ++
Sbjct: 73  GLSQFDIVQLGWQD--DQPFWLLFR---DATFCAT-----LALVLNTSAYVAELLAGMMV 122

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR +  A  A G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+ 
Sbjct: 123 TFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDIT 182

Query: 351 SVG 353
            V 
Sbjct: 183 GVA 185


>gi|225871086|ref|YP_002747033.1| ABC transporter permease protein [Streptococcus equi subsp. equi
           4047]
 gi|225700490|emb|CAW94927.1| ABC transporter permease protein [Streptococcus equi subsp. equi
           4047]
          Length = 280

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 8/128 (6%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ + +V  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 143 AFAFNEAAYTSETIRAAIQSVHTGEIEAAKSLGMTSAQVYRRVIIPNAAVVATPTLINGL 202

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K +SLA   G    FA    +GG       + I + L    +Y  +SI+I      
Sbjct: 203 IGLTKGTSLAFNAGIVEMFAQAQILGGADYRYFERYISVAL----VYWGISILIEQAGRL 258

Query: 388 LNAKIALK 395
           +   +A+K
Sbjct: 259 IEYNMAIK 266


>gi|85705012|ref|ZP_01036112.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670334|gb|EAQ25195.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 250

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 6/132 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI---GGSTVSPEFMSLYIALSCYT 277
           LL + T +I  +P LVLI + Y +  D  ++ Q       G   +S     +++ L    
Sbjct: 67  LLAVYTTVIRAVPELVLILILYYVGSD--MINQAAIAMGYGRVEISGVVAGIWV-LGVVQ 123

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  E++R  + A+P GQ+EAA A G+      R V +P  M    P L + +L   K+
Sbjct: 124 GAYATEVLRGAIQAIPPGQLEAARAFGMPPLMTLRRVTIPAMMGFATPGLANLWLIATKD 183

Query: 338 SSLAVAVGFADL 349
           ++L   VGF++L
Sbjct: 184 TALLAIVGFSEL 195


>gi|84517034|ref|ZP_01004391.1| polar amino acid uptake family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84509152|gb|EAQ05612.1| polar amino acid uptake family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 263

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 4/143 (2%)

Query: 253 QFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           QF +I  S + P     +    +ALS   A +  E++R    +V  GQ+EAA ++G+   
Sbjct: 114 QFPWIRESELWPYLRQAWPYALLALSLSFAGYEGEVMRGAFKSVAGGQLEAARSMGMGRF 173

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R +  PQA++  +P L  + +  LK + L   +   ++ +V   +   T    E +L
Sbjct: 174 AIFRRIWFPQALQRALPTLGGETVLQLKATPLVATITVIEIYAVSSRVRQDTFIIYEPLL 233

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           +   IY+ ++ ++AL    L  +
Sbjct: 234 LLAVIYMVIAGLLALAFKLLEQR 256


>gi|34496309|ref|NP_900524.1| histidine transport system membrane protein M [Chromobacterium
           violaceum ATCC 12472]
 gi|34102162|gb|AAQ58529.1| histidine transport system membrane protein M [Chromobacterium
           violaceum ATCC 12472]
          Length = 237

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 77/164 (46%), Gaps = 2/164 (1%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +++ T++  G P  V +   Y   +   V+ +  F+        +    +A +  T A+ 
Sbjct: 59  VWLYTYVFRGTPLYVQLIFFYSGMYSLEVVREVGFLN-HFFREGYNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + A P G++EA  A G++     R V++P A+R  +P  +++ + +L  +++A
Sbjct: 118 TEIFAGAIKATPYGEIEAGRAYGMSPFTLYRRVIIPSALRRALPAYSNEVILMLHATTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALF 384
                 D++ V   +   T  +     +   +YLS++ I++ LF
Sbjct: 178 FTATVPDILKVARDVNAATYDSFNAFGLAALLYLSITFILVGLF 221


>gi|167550404|ref|ZP_02344161.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205324499|gb|EDZ12338.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 222

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 20/222 (9%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           TLT+ + A   V + V  I+L+L   F   L R             YI+ F   G P LV
Sbjct: 17  TLTVASIAVALVLALVFTIILTLKTPFVVWLVRG------------YITLFT--GTPLLV 62

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I L Y      P L ++  +      P   +L IALS  +AA+  ++    + A+P GQ
Sbjct: 63  QIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCAL-IALSLNSAAYTTQLFYGAIRAIPEGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            ++  ALG+  +K T  +LLP A +  +   +++ + + K++SLA  +   +++     +
Sbjct: 122 WQSCGALGM-GKKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLL 180

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 181 YGRTYDVV-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221


>gi|238762252|ref|ZP_04623224.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
 gi|238699599|gb|EEP92344.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
          Length = 217

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 55/121 (45%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+IAE  R  +  VP+GQ EAA AL          ++ PQA + ++P L + 
Sbjct: 93  VGMGLYYGAYIAEAFRGAINGVPQGQWEAARALDFPPLTRWTRIIFPQAFKPMLPVLGNY 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K + L   +   +L      I   T +  E   +   ++L +S+  +L  + L  
Sbjct: 153 LIGMFKETPLLAVITIPELFQAAKQIAGLTYRYNEPYTLMALLFLLISLPTSLLFSYLER 212

Query: 391 K 391
           +
Sbjct: 213 R 213



 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 23/121 (19%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +  +G + AT++G +V       +  +  +C+ YV  FRN P LV ++FL
Sbjct: 15  LLPGLLVTLEVVVAGFLLATVLGMVVAVLLQLQSPFITPVCQAYVTFFRNTPLLVQLYFL 74

Query: 149 YKSV-LSVLPIPDHSIVL----------------------PFGMFLNNRGLSFPTLTMDT 185
           + ++ LS L +P  +  +                      P G +   R L FP LT  T
Sbjct: 75  FFALPLSGLALPAMATGMVGMGLYYGAYIAEAFRGAINGVPQGQWEAARALDFPPLTRWT 134

Query: 186 N 186
            
Sbjct: 135 R 135


>gi|84517033|ref|ZP_01004390.1| polar amino acid uptake family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84509151|gb|EAQ05611.1| polar amino acid uptake family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 210

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIA-LSCYTA 278
           LL + T ++  +P L+LI + Y    D  +L Q    +G   V    +   IA L     
Sbjct: 32  LLAVYTVVVRAVPELILILILYYAGTD--LLNQALRALGQRPVEISGVVAGIAVLGIVQG 89

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  E++R  + +VPRGQ EAA A G+   +  R V +P  +   +P L++ +L   K++
Sbjct: 90  AYATEVLRGAIQSVPRGQHEAARAYGMGPVQIFRRVTIPAMLPLALPGLSNLWLIATKDT 149

Query: 339 SLAVAVGFADL 349
           +L   VGF++L
Sbjct: 150 ALLAIVGFSEL 160


>gi|238787905|ref|ZP_04631701.1| Amino acid ABC transporter, permease protein [Yersinia
           frederiksenii ATCC 33641]
 gi|238723853|gb|EEQ15497.1| Amino acid ABC transporter, permease protein [Yersinia
           frederiksenii ATCC 33641]
          Length = 227

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 24/134 (17%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++FGLP     AL  +L   +  L               +++ I L  Y+     EI+R
Sbjct: 80  FIVFGLP-----ALGLKLSAGQAAL---------------LAMIINLGAYST----EIIR 115

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A  +GQ EA   LGL+  +    V+LP +++ I P L SQ + ++  S++   V F
Sbjct: 116 AGIQASAKGQWEAGRVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVAF 175

Query: 347 ADLVSVGGTIINQT 360
            +L      I ++T
Sbjct: 176 EELTFAANLIQSRT 189


>gi|326938140|gb|AEA14036.1| cystine transport system permease protein [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 87

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%)

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I  
Sbjct: 2   RRIILPQACRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVG 61

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
             YL L ++   F+N L   I  K  
Sbjct: 62  AYYLVLVLLFTYFVNLLEKTITTKRN 87


>gi|149202379|ref|ZP_01879352.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144477|gb|EDM32508.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 250

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 6/132 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI---GGSTVSPEFMSLYIALSCYT 277
           LL I T +I  +P LVLI + Y +  D  ++ Q       G   +S     +++ L    
Sbjct: 67  LLAIYTTVIRAVPELVLILILYYVGSD--LINQAAIAMGYGRIEISGVVAGIWV-LGVVQ 123

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  E++R  + A+P GQ+EAA A G+      R V +P  M    P L + +L   K+
Sbjct: 124 GAYATEVLRGAIQAIPPGQLEAARAFGMPPLMTLRRVTIPAMMSFATPGLANLWLIATKD 183

Query: 338 SSLAVAVGFADL 349
           ++L   VGF++L
Sbjct: 184 TALLAIVGFSEL 195


>gi|156934641|ref|YP_001438557.1| arginine transporter permease subunit ArtM [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156532895|gb|ABU77721.1| hypothetical protein ESA_02475 [Cronobacter sakazakii ATCC BAA-894]
          Length = 222

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L    ++      P   +L +ALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQNSPWLWHVLSEPWLCAL-VALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ RK T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCGALGMS-RKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGYGQLLYGRT 184


>gi|77463945|ref|YP_353449.1| ABC basic amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126462779|ref|YP_001043893.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|221639801|ref|YP_002526063.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|77388363|gb|ABA79548.1| ABC basic amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126104443|gb|ABN77121.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|221160582|gb|ACM01562.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 293

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 4/82 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF++ ++   + AVP+ Q+E A + G++H +  R +L+PQ     +P L++ ++ L+K 
Sbjct: 153 GAFVSNVLTGAMNAVPKAQLETAESYGMSHGQVFRRILVPQMWIYALPGLSNLWMILIKA 212

Query: 338 SSLAVAVGFADLV----SVGGT 355
           + L   +G  D+V     +GGT
Sbjct: 213 TPLLFLLGVQDIVYWARELGGT 234


>gi|260597265|ref|YP_003209836.1| arginine transporter permease subunit ArtM [Cronobacter turicensis
           z3032]
 gi|260216442|emb|CBA29555.1| Arginine transport system permease protein artM [Cronobacter
           turicensis z3032]
          Length = 222

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L  + ++      P   +L +ALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQNYPWLWHVLSEPWLCAL-VALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ RK T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCGALGMS-RKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 167 TITLMEVMGYSQLLYGRT 184


>gi|237752284|ref|ZP_04582764.1| glutamine ABC transporter permease GlnP [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229375773|gb|EEO25864.1| glutamine ABC transporter permease GlnP [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 221

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 32/175 (18%)

Query: 191 VFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           VFS +LG  ++L       F   +++ + E + +  PLL    FL +GLP    I LK  
Sbjct: 33  VFSIILGFFIALIQFYKIRFLNAVAQGYIELS-RNTPLLIQLFFLYYGLPQ---IGLKLD 88

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +     L    F+GGS                   ++AE  R+GL +V + Q+E+  +L
Sbjct: 89  SYI--CALIGITFLGGS-------------------YMAESFRAGLESVGKIQIESGRSL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           GL+ ++    ++LPQ++   +P + +  + LLK +S+  A+   D++ V   +I 
Sbjct: 128 GLSEKQLVFSIILPQSLMVSLPYIGANVIFLLKETSVVSAIALVDVLFVTKDLIG 182


>gi|90418082|ref|ZP_01225994.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337754|gb|EAS51405.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 263

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SFV G V+SL    L R       + L  +++  F   G P +  I L Y   F +  
Sbjct: 61  VGSFVCGAVVSL-PVALGRMSANPVARTLAFVFVYFFR--GTPLIAQIFLVY-YGFGQ-F 115

Query: 251 LGQFNFIGGSTVSPE--FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            G F  +G      E  + +L+ +L+  TAA+ AEI+R  + +VP GQ E A +LG+   
Sbjct: 116 RGAFETVGLWWFFREAWYCALF-SLTLNTAAYQAEILRGAIQSVPTGQWEGARSLGMPRV 174

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
                V+LPQAM   + P  ++ + ++K S++   +   DL
Sbjct: 175 VIFFKVILPQAMIVALRPYANEIILMIKASAIVAIITVYDL 215


>gi|227537259|ref|ZP_03967308.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242974|gb|EEI92989.1| metal ion ABC superfamily ATP binding cassette transporter,
           membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 217

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 15/135 (11%)

Query: 192 FSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           F F+LG+     LF TR  +    KT   +  + ++ F    +P ++LI   + + F + 
Sbjct: 26  FGFLLGLPTGILLFVTRKGQIMENKTIHQITSVIVNIFR--SIPFIILIV--WMIPFTRE 81

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++G    IG S       +  + LS   A F+A +V + L+ +P G +EAA A+G TH++
Sbjct: 82  LVG--TSIGVS-------AALVPLSIGAAPFVARLVENSLLEIPAGLIEAARAMGATHKQ 132

Query: 310 ATRLVLLPQAMRSII 324
               VLLP+++ S++
Sbjct: 133 IILKVLLPESLPSMV 147


>gi|238898835|ref|YP_002924517.1| arginine transport protein (ABC superfamily, membrane) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466595|gb|ACQ68369.1| arginine transport protein (ABC superfamily, membrane) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 222

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +S  ++   +AL+  +AA+  ++    L A+P GQ EA  ALG++  +A R VLLP A++
Sbjct: 87  LSQPWLCAMMALTLNSAAYTTQLFYGALRALPVGQWEACQALGMSKTQALR-VLLPFALK 145

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +   +++ + + K++SL   +   DL+     I  +T   I+  L    IY  ++ ++
Sbjct: 146 RALSSYSNEVVLIFKSTSLVYTITLMDLMGYTQLIYGRTYD-IKAFLAVGIIYFCINGVL 204

Query: 382 ALFMNRLNAKIALKEKK 398
            L M  +  K    E++
Sbjct: 205 TLLMRFVERKGLAFERR 221


>gi|212709679|ref|ZP_03317807.1| hypothetical protein PROVALCAL_00727 [Providencia alcalifaciens DSM
           30120]
 gi|212687490|gb|EEB47018.1| hypothetical protein PROVALCAL_00727 [Providencia alcalifaciens DSM
           30120]
          Length = 222

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 88/179 (49%), Gaps = 16/179 (8%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PLL +  FLI+  P+      +++   D P+L +F       +S  ++   +AL+  +AA
Sbjct: 59  PLL-VQFFLIYNGPS------QFKSLQDYPMLWEF-------ISTPWICAMVALALNSAA 104

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +   +    + A+P GQ ++  ALG+   +  R ++LP A +  +   +++ + + K++S
Sbjct: 105 YSTLLFHGAVKAIPSGQWQSCQALGMNKLQTMR-IILPYAFKRSLSSYSNEVVLIFKSTS 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA  +   D++     +  QT   +  +   + IYL ++ ++ L M  +  K    E++
Sbjct: 164 LASTITMLDIMGYSSQVFGQTWDVMAFVAAGI-IYLVVNAILTLIMRLIERKALAFEQR 221


>gi|226322422|ref|ZP_03797940.1| hypothetical protein COPCOM_00193 [Coprococcus comes ATCC 27758]
 gi|225209144|gb|EEG91498.1| hypothetical protein COPCOM_00193 [Coprococcus comes ATCC 27758]
          Length = 214

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 47/73 (64%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + AFI+EIV+  L+++  GQ EA  +LGLT  +    +++P A ++ +P L +Q++  +K
Sbjct: 98  SGAFISEIVKGALMSIDPGQKEAGASLGLTSAQTMIHLVIPPAFKAALPALFNQFIISVK 157

Query: 337 NSSLAVAVGFADL 349
           +++L  A+   ++
Sbjct: 158 DTALLSAIAVNEI 170


>gi|126650968|ref|ZP_01723179.1| ABC transporter permease [Bacillus sp. B14905]
 gi|126592169|gb|EAZ86218.1| ABC transporter permease [Bacillus sp. B14905]
          Length = 220

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 22/206 (10%)

Query: 192 FSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           FS ++GI L L    TR  + F  K       L I+  +I  +P ++L  L + L F K 
Sbjct: 29  FSILIGIPLGLLIVLTRPGQSFENKFFYQFFNLVIN--IIRSVPFIIL--LFFILPFTKV 84

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++G       +T+  +   + + L  YTA +IA ++ S L+ V  G +EA  A+G+  R 
Sbjct: 85  IVG-------TTIGVK--GVIVPLVVYTAPYIARLMESALLEVDSGVVEAYTAMGIKRRH 135

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEI 366
               VLL +A  SII  LT   + L+  +++A  VG   L    G +  + G     +++
Sbjct: 136 IIWHVLLREARPSIILGLTIATIGLIGATAMAGMVGAGGL----GDLAYRYGHLRYEVDV 191

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +FI + L   I    NR++AK+
Sbjct: 192 MYATVFILIILVQSIQSIGNRISAKL 217


>gi|330861365|emb|CBX71600.1| histidine transport system permease protein hisM [Yersinia
           enterocolitica W22703]
          Length = 251

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 30/183 (16%)

Query: 186 NAKIFVFSFVLGIVLSL--------------FATRLSRHFHEKTGKALPLLYISTFLIF- 230
            AK+F+ S V G++L+L              +  R   +F   T      LY+   LI+ 
Sbjct: 27  TAKLFLLSVVPGLLLALVMAVGQAFGPRPLAWLIRSVTYFFRSTP-----LYLQLMLIYY 81

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GL    ++ L +Q   D+P    F           F +  +AL   T+A++AE++   ++
Sbjct: 82  GLSQFDIVQLGWQD--DQPFWLLFR-------DATFCAT-LALVLNTSAYVAELLAGMMV 131

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR +  A  A G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+ 
Sbjct: 132 TFPRQEWVAGEAFGMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDIT 191

Query: 351 SVG 353
            V 
Sbjct: 192 GVA 194


>gi|238024847|ref|YP_002909079.1| Polar amino acid ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237879512|gb|ACR31844.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 228

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 57/101 (56%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A++    A+  EIVR+G+ AVPRG  EAA AL L+  +A   V+LPQA+  + 
Sbjct: 92  EVTAAILAMTLNLGAYSVEIVRAGVAAVPRGHHEAAAALALSRAQAWCHVVLPQALAKVF 151

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           P L SQ +  L  S++   +  ADL    G I ++  +A E
Sbjct: 152 PALVSQIVITLLGSAVVSQISVADLTYAAGYIQSRNFRAFE 192


>gi|146276917|ref|YP_001167076.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555158|gb|ABP69771.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 293

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF++ ++   + AVPR Q+E A + G+T  +  R +L+PQ     +P L++ ++ L+K 
Sbjct: 153 GAFVSNVLTGAMNAVPRAQLETAESYGMTQGQVFRRILVPQMWIYALPGLSNLWMILIKA 212

Query: 338 SSLAVAVGFADLV----SVGGT 355
           + L   +G  D+V     +GGT
Sbjct: 213 TPLLFLLGVQDIVYWARELGGT 234


>gi|288936652|ref|YP_003440711.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288891361|gb|ADC59679.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 221

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 20/213 (9%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           F TL +   A +   + ++GI L  F+      + +K    + + ++S  L+  +P L+L
Sbjct: 19  FATLELFITAALA--ALIIGIALCYFS-----EYQKKVINRIIIGFVS--LMRAIPFLIL 69

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
               Y L++  P LG        ++ P    L +AL  Y  A+  EI+RS       G +
Sbjct: 70  ---AYLLYYGLPQLG-------ISMEPWTAGL-LALIIYHGAYFFEILRSQRRVFSGGYI 118

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAAIA G +     R ++LP  + S +P + +Q +  LK+++    +   ++ +   ++ 
Sbjct: 119 EAAIAQGFSRYAIFRRIILPNIISSALPLIGNQLIICLKDTAFLSIITVQEITAAANSVQ 178

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                     ++ + +Y ++SI++ L + RL A
Sbjct: 179 ATYFIPFNAFIVAIGLYWAISILLELLIKRLTA 211


>gi|91787284|ref|YP_548236.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696509|gb|ABE43338.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 218

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 1/138 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  +SP  ++  + L    AA + ++  +GL  +  GQ EAA+++G+T  +    +LLPQ
Sbjct: 82  GIRLSP-LVAAILGLGLVGAAVLCDVFVAGLKCIHAGQREAALSVGMTPGQTLAHILLPQ 140

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
             R   P L +    LLK++S+A A+   +++     ++  T +   I L  M +Y ++ 
Sbjct: 141 MFRVTWPSLGNYTSQLLKDTSIASAIAAPEIMFFARNLVTSTFETTLIYLAAMLLYAAMV 200

Query: 379 IMIALFMNRLNAKIALKE 396
           + I+    +  +++  K 
Sbjct: 201 LPISWGFAKTESRMENKR 218


>gi|238765044|ref|ZP_04625980.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
 gi|238696730|gb|EEP89511.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
          Length = 227

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 50/90 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A++    A+  EI+R+G+ A  +GQ EA   LGL+  +    V+LP +++ I P L SQ
Sbjct: 100 LAMTINLGAYSTEIIRAGIQASAKGQWEAGRVLGLSRSQVFFRVILPPSLQRIYPALVSQ 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            + ++  S++   V F +L      I ++T
Sbjct: 160 CIIVMLGSAVVSQVSFEELTFAANLIQSRT 189


>gi|258507475|ref|YP_003170226.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|257147402|emb|CAR86375.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259648829|dbj|BAI40991.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 222

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 77/156 (49%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +I + Y L+F  P L      G     P  +    AL+ +++A+  E  R+   A+   Q
Sbjct: 63  MIVVLYILYFALPNLTSMLNNGKGLHIPATVVAVAALALFSSAYFGETFRAAYQALDPTQ 122

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA+A GL+   A R ++LPQA    +P + +  ++++K +++   +G  ++      +
Sbjct: 123 LEAALASGLSKMTAMRRIILPQAAALALPNVFNSVMDIVKGTAIIYNIGLLEITGTSILV 182

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++T Q I   L    IYL L  +++   + +  +I
Sbjct: 183 GSKTYQFIPAYLAAWTIYLILYWLVSAIFHLIKKQI 218


>gi|213022716|ref|ZP_03337163.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 83

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 46/80 (57%)

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           +L++LPQA R+++P L +Q + L +++SL   +  AD      TI  + G  +E+IL   
Sbjct: 2   KLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAG 61

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            +Y  +S+  +L ++ L  +
Sbjct: 62  AVYFVISLSASLLVSYLKKR 81


>gi|86138599|ref|ZP_01057172.1| ABC transporter, permease protein, HisMQ family protein
           [Roseobacter sp. MED193]
 gi|85824659|gb|EAQ44861.1| ABC transporter, permease protein, HisMQ family protein
           [Roseobacter sp. MED193]
          Length = 267

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 10/126 (7%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVP  Q+E A A GLT R+    +L+PQ     +P L++ ++ L+K 
Sbjct: 127 GAFAANVLYGAMQAVPHAQIETAEAYGLTPRQTFWRILVPQMWTYALPGLSNLWMVLIKA 186

Query: 338 SSLAVAVGFADLV----SVGG------TIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L   +G  D+V     +GG      T         +  L  +  YL+ + +  + +NR
Sbjct: 187 TPLLFLLGVEDIVYWAKELGGSKTANFTAYPHPDWRTQYFLALLVFYLAFTKVSEVVLNR 246

Query: 388 LNAKIA 393
           +  +++
Sbjct: 247 ITTRLS 252


>gi|259908948|ref|YP_002649304.1| arginine transporter permease subunit ArtM [Erwinia pyrifoliae
           Ep1/96]
 gi|224964570|emb|CAX56083.1| Arginine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283478954|emb|CAY74870.1| Arginine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
 gi|310767149|gb|ADP12099.1| arginine transporter permease subunit ArtM [Erwinia sp. Ejp617]
          Length = 223

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P +   +++  S +S  ++   +ALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSVQNISWLW-SLLSQPWLCALLALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            +    + A+P GQ +A  ALG+  +   R +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 LLFHGAVRAIPSGQWQACAALGMDRKDQLR-ILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +++  G  +  +T   I +      IYL ++ ++ L M  +  +    E++
Sbjct: 167 TITLMEVMGHGQLLYGRT-YDIGVFAAAGVIYLCVNGLLTLLMRLIERRALAFERR 221


>gi|170734677|ref|YP_001773791.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820715|gb|ACA95296.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 244

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 8/142 (5%)

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A++  L     V G F F         F+   ++L     A++ +I R+ L  VP GQ+E
Sbjct: 88  AIENALRGSGIVSGDFAF-------DPFVVAALSLGFIQGAYLTDIFRAALANVPVGQIE 140

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTII 357
           AA A G+T  +    + LP A R  +P + + +LN  K++S    +G F DL+       
Sbjct: 141 AAHAYGMTPWQTFARIRLPAAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAA 200

Query: 358 NQTGQAIEIILIWMFIYLSLSI 379
             T   +   L+   ++L LSI
Sbjct: 201 GATRHYVFFYLVTAALFLLLSI 222


>gi|39939125|ref|NP_950891.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39722234|dbj|BAD04724.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 252

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 3/117 (2%)

Query: 264 PEFMSLYIALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           P+   ++ AL   T    A +  I+   +  V +GQ+EAA +LG+T R+    ++ PQA+
Sbjct: 111 PQINQIHAALFVITLNAGASLTMILMQNIKFVDKGQIEAAFSLGMTQRQTFYNIIFPQAL 170

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           +  +P + +Q++  +K+ +    +G  ++  +    +  T   I   ++   IYL L
Sbjct: 171 KKSVPFVITQFITNIKDCTFFAFIGLVEMGWIANRNMGITADVITPFVLLSIIYLVL 227


>gi|329298276|ref|ZP_08255612.1| polar amino acid ABC transporter, inner membrane subunit [Plautia
           stali symbiont]
          Length = 122

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 55/98 (56%)

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +ALG+TH +  R ++LPQA R ++PP+ +Q +++LK+S+L   +   +L+ V     + +
Sbjct: 1   MALGMTHAQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIVVQELLLVANQTASAS 60

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  E +      YL L+ +  LF + L   +  K ++
Sbjct: 61  FRYFEALCAAGLYYLLLTSLFMLFQSWLERTLDPKLRR 98


>gi|283832470|ref|ZP_06352211.1| arginine ABC transporter, permease protein ArtM [Citrobacter
           youngae ATCC 29220]
 gi|291072129|gb|EFE10238.1| arginine ABC transporter, permease protein ArtM [Citrobacter
           youngae ATCC 29220]
          Length = 222

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPTLQEYPLLWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 167 TITLMEVMGYSQLLYGRT 184


>gi|186473373|ref|YP_001860715.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184195705|gb|ACC73669.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 214

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 44/79 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  TAAF  EI R+ LI  PR Q +AA+A  +      R +++PQ  RS +P L ++
Sbjct: 87  LALTISTAAFNCEIWRAALINFPRDQYDAALAFAMPRTVRFRRIVMPQIWRSSLPGLVNE 146

Query: 331 YLNLLKNSSLAVAVGFADL 349
               +K++     +G  ++
Sbjct: 147 MTLQIKSTPAVAVIGIVEI 165


>gi|134288196|ref|YP_001110359.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134132846|gb|ABO59556.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 237

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 13/115 (11%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + ++P G++EAA A G++       +++P A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIKSIPYGEIEAARAFGMSPWVLYTRIIIPSALRRALPYYSNE 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-------------IILIWMF 372
            + +L  ++LA      D++ V   + + T  + E              +L+WMF
Sbjct: 167 VILMLHATTLAFTATVPDILKVARDVNSATYASFEAFGIAAVLYACIAFVLVWMF 221


>gi|320547898|ref|ZP_08042181.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320447438|gb|EFW88198.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 267

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 61/124 (49%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAIQAVNVGEIEAAKSLGMTSFQVYRRVIIPNAAVIATPTLINSL 189

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L K +SLA   G  ++ +    +     +  E  +    +Y  +SI+I      +  K
Sbjct: 190 IGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVAIVYWVISILIEQIGRLIEKK 249

Query: 392 IALK 395
           +++ 
Sbjct: 250 MSID 253


>gi|239833586|ref|ZP_04681914.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821649|gb|EEQ93218.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 240

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 7/201 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +I V  + LG+++ +F   L + +     +   LL + T ++  +P LVLI + Y    D
Sbjct: 31  QIAVGGYSLGLLIGMFGA-LGKLYGGPIIR--DLLEVYTTVVRAVPELVLILILYYAGTD 87

Query: 248 --KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
               +L  F   G   +S     +++ +     A+  E++R  + A+  GQ+EAA A G+
Sbjct: 88  LLNQLLALFGH-GKVDISGLAAGIFV-IGVVQGAYSTEVLRGAIKAIAPGQIEAARAFGM 145

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              K  R + +P  +   IP + + +L   K+++L   VGF++L  V       T   + 
Sbjct: 146 PPSKMLRRITIPAMLPFAIPGIANLWLISTKDTALLAVVGFSELTLVTRQAAGTTKHYLL 205

Query: 366 IILIWMFIYLSLSIMIALFMN 386
             +    +YL L+++  +F+ 
Sbjct: 206 FFMAAGVLYLGLTLISNVFIG 226


>gi|183602354|ref|ZP_02963720.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683331|ref|YP_002469714.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241191292|ref|YP_002968686.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196698|ref|YP_002970253.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218273|gb|EDT88918.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219620981|gb|ACL29138.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240249684|gb|ACS46624.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240251252|gb|ACS48191.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295794285|gb|ADG33820.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 218

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 24/137 (17%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +  PLL    FL FGLP +  +        +   +    F+GGS             
Sbjct: 59  EVSRNTPLLVQLYFLYFGLPKMGFV-----WSAELCAIVGLGFLGGS------------- 100

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                 ++AE +R+GL +VP+ Q E A  LG    +    V++PQA+    P + +  + 
Sbjct: 101 ------YMAESMRAGLQSVPQIQRENAYMLGFNTWQTLTRVIVPQAVSISTPGIVANVIF 154

Query: 334 LLKNSSLAVAVGFADLV 350
           L+K SS+  A+  AD++
Sbjct: 155 LIKESSVVSAIALADVM 171


>gi|171317737|ref|ZP_02906919.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097087|gb|EDT41940.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 244

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 38/216 (17%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-- 238
           LT+   A  F    +LGI  +L   +LSRH         PL +++ F      TLV    
Sbjct: 28  LTLGVAAASFCVGVLLGIAGAL--GKLSRH--------TPLAWLARFYT----TLVRALP 73

Query: 239 --------------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                         A++  LH    V   F F         F+   ++L     A++ +I
Sbjct: 74  ELLCLLLAFYAVAPAVESVLHRSGVVSDGFAF-------DPFVVAALSLGFIQGAYLTDI 126

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L+ VP GQ+EAA A G++  +    V LP A+R  +P + + +LN  K++S    +
Sbjct: 127 FRAALVNVPVGQIEAAHAYGMSPWQTLTRVRLPIAVRLALPGVGNVWLNATKDASFISVL 186

Query: 345 G-FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           G F DL+         T   +   L+   ++L LS+
Sbjct: 187 GSFTDLLKASQLAAGATRHYVFFYLVSAALFLLLSM 222


>gi|290510296|ref|ZP_06549666.1| binding-protein-dependent transport system inner membrane component
           [Klebsiella sp. 1_1_55]
 gi|289777012|gb|EFD85010.1| binding-protein-dependent transport system inner membrane component
           [Klebsiella sp. 1_1_55]
          Length = 221

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 24/174 (13%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A+P L ++  L +GLP L                       G ++ P    L +AL  Y
Sbjct: 62  RAIPFLILAYLLYYGLPQL-----------------------GISMEPWTAGL-LALIIY 97

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+  EI+RS       G +EAAIA G +     R ++LP  + S +P + +Q +  LK
Sbjct: 98  HGAYFFEILRSQRRVFSGGYIEAAIAQGFSRYAIFRRIILPNIISSALPLIGNQLIICLK 157

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++    +   ++ +   ++           ++ + +Y ++SI++ L + RL A
Sbjct: 158 DTAFLSIITVQEITAAANSVQATYFIPFNAFIVAIGLYWAISILLELLIKRLTA 211


>gi|152969145|ref|YP_001334254.1| putative binding-protein-dependent transport systems inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238893601|ref|YP_002918335.1| putative binding-protein-dependent transport system inner membrane
           component [Klebsiella pneumoniae NTUH-K2044]
 gi|330007452|ref|ZP_08305951.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150953994|gb|ABR76024.1| putative binding-protein-dependent transport systems inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238545917|dbj|BAH62268.1| putative binding-protein-dependent transport system inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|328535463|gb|EGF61931.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 221

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 20/213 (9%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           F TL +   A +   + ++GI L  F+      + +K    + + ++S  L+  +P L+L
Sbjct: 19  FATLELFITAALA--ALIIGIALCYFS-----EYQKKVINRIIIGFVS--LMRAIPFLIL 69

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
               Y L++  P LG        ++ P    L +AL  Y  A+  EI+RS       G +
Sbjct: 70  ---AYLLYYGLPQLG-------ISMEPWTAGL-LALIIYHGAYFFEILRSQRRVFSGGYI 118

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAAIA G +     R ++LP  + S +P + +Q +  LK+++    +   ++ +   ++ 
Sbjct: 119 EAAIAQGFSRYAIFRRIILPNIVSSALPLIGNQLIICLKDTAFLSIITVQEITAAANSVQ 178

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                     ++ + +Y ++SI++ L + RL A
Sbjct: 179 ATYFIPFNAFIVAIGLYWAISILLELLIKRLTA 211


>gi|317047527|ref|YP_004115175.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949144|gb|ADU68619.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 222

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P +    ++      P   +L +ALS  +AA+  
Sbjct: 51  YITVFT--GTPLLVQIFLIYYGPGQFPSIQNLPWLWHLLSQPWLCAL-LALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG+ +RK T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAVRAIPSGQWQSCAALGM-NRKDTLRILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +++  G  +  +T   + +      +YL ++ ++ L M  +  +    E++
Sbjct: 167 TITLMEVMGHGQLLYGRTYD-VTVFAAAGLVYLCVNGLLTLMMRLIERRALAFERR 221


>gi|227114775|ref|ZP_03828431.1| histidine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 176

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 43/70 (61%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++
Sbjct: 107 LALALNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCIILPSALRIALPAYSNE 166

Query: 331 YLNLLKNSSL 340
            + +L +++L
Sbjct: 167 VILMLHSTAL 176


>gi|126442978|ref|YP_001062437.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           pseudomallei 668]
 gi|126222469|gb|ABN85974.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 668]
          Length = 371

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L     A+  E  R   +AVPRGQ+EA  A G+   +    ++  Q MR  +P
Sbjct: 236 FVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMGAWRVFARIMFAQMMRFALP 295

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + + +  L+K ++L   +G AD+V  
Sbjct: 296 GIGNNWQVLVKATALVSIIGLADVVKA 322


>gi|291518763|emb|CBK73984.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 224

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 17/168 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S  LG+V+ +  T  ++  H     A   +Y+ T  I  +P +VL+ + Y        
Sbjct: 34  VLSIFLGLVVGVLMTVNNKILH-----AFLKVYLETVRI--MPQMVLLFIVY-------- 78

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
            G     G   +S E  ++++  + +  A + ++VR  + ++P  Q E+A ALG+   + 
Sbjct: 79  FGTTRVFGWD-MSAESSAIFV-FTFWGTAEMGDLVRGSIKSIPIIQFESAWALGMDKLQT 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
              ++LPQ +R +IP   +    ++K +SL + +G  +++ V   II 
Sbjct: 137 YFYIILPQTVRRLIPLSINLITRMIKTTSLVMMIGIVEVLKVAQQIIE 184


>gi|257125146|ref|YP_003163260.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049085|gb|ACV38269.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 219

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 24/121 (19%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+    FL FGLP    I + +   +   VLG  +F+GGS                   
Sbjct: 64  PLVIQLFFLYFGLPK---IGITFN-SYICAVLG-LSFLGGS------------------- 99

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ E  RSGL +V +GQ E+ +++GLT  +    V+LPQA     P + +  + LLK +S
Sbjct: 100 YMCEAFRSGLESVTKGQRESGLSIGLTESQLITNVILPQAFTVSFPAIAANIIFLLKETS 159

Query: 340 L 340
           +
Sbjct: 160 V 160


>gi|110679186|ref|YP_682193.1| arginine/histidine-ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109455302|gb|ABG31507.1| arginine/histidine-ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 278

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G++ R+    VL+PQ     +P L++ ++ L+K 
Sbjct: 137 GAFAANVLFGAMRAVPRSQLETAEAYGMSRRQTFWRVLVPQMWVYALPGLSNLWMVLIKA 196

Query: 338 SSLAVAVGFADLV----SVGGT 355
           + L   +G  D+V     +GGT
Sbjct: 197 TPLLFLLGVEDIVYWARELGGT 218


>gi|197251179|ref|YP_002146396.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197214882|gb|ACH52279.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 226

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           H    KA+  LY+  F+  G P   LI + + +++  P  G    I  S+ +       +
Sbjct: 51  HRPVVKAITRLYMDFFI--GTP---LILILFVIYYGLPQSG----IHLSSFTVAVTGFTL 101

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y AA++     +   A+ + + EAA+  GL  R+    ++LPQ + S IP LT+Q 
Sbjct: 102 NVGAYNAAYMT----TAYNALNKYETEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQM 157

Query: 332 LNLLKNSSLAVAVGFAD 348
           +N LK+S++   + + +
Sbjct: 158 INNLKDSTIVFLIQYTE 174


>gi|163735055|ref|ZP_02142492.1| arginine/histidine-ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
 gi|161391837|gb|EDQ16169.1| arginine/histidine-ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
          Length = 278

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G++ R+    VL+PQ     +P L++ ++ L+K 
Sbjct: 137 GAFAANVLFGAMRAVPRSQLETAEAYGMSRRQTFWRVLVPQMWVYALPGLSNLWMVLIKA 196

Query: 338 SSLAVAVGFADLV----SVGGT 355
           + L   +G  D+V     +GGT
Sbjct: 197 TPLLFLLGVEDIVYWARELGGT 218


>gi|169827724|ref|YP_001697882.1| amino acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168992212|gb|ACA39752.1| amino acid ABC transporter, permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 77

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 6/70 (8%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PV+G++       V   F++  +      AA++AEI R GL+A+ +GQ EAA  LGL+  
Sbjct: 3   PVIGEY------LVLDRFVAACLGFILNYAAYLAEIFRGGLLAIDKGQYEAAQVLGLSKW 56

Query: 309 KATRLVLLPQ 318
           + T  V+LPQ
Sbjct: 57  QTTTRVILPQ 66


>gi|77457435|ref|YP_346940.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77381438|gb|ABA72951.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 236

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 25/225 (11%)

Query: 170 FLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FL   G +   L M     +A IF F F++ I LS+   R+S HF+ +     P+ +  T
Sbjct: 12  FLYTDGQNITGLAMTMWLLSASIF-FGFIVSIPLSI--ARVSPHFYIR----WPVQFY-T 63

Query: 227 FLIFGLPTLVLIALKYQLHFD------KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L  G P  + + + Y   +       +P+L  F                +A +  T A+
Sbjct: 64  YLFRGTPLYIQLLICYTGIYSLAAVRAQPLLDSF-------FRDAMNCTILAFALNTCAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI    + ++  G++EAA A GLT  K    V++P A+R  +P  +++ + +L ++++
Sbjct: 117 TTEIFAGAIRSMNHGEVEAAKAYGLTGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTV 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI-MIALF 384
           A      D++ V     + T    +   I   IYL+++  ++ LF
Sbjct: 177 AFTATIPDILKVARDANSATFLTFQSFGIAALIYLTITFALVGLF 221


>gi|85702946|ref|ZP_01034050.1| ABC transporter, permease protein, HisMQ family protein
           [Roseovarius sp. 217]
 gi|85671874|gb|EAQ26731.1| ABC transporter, permease protein, HisMQ family protein
           [Roseovarius sp. 217]
          Length = 293

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR QME A A G++ R+A   +++PQ     +P L + ++ L+K 
Sbjct: 153 GAFAANVLFGAMRAVPRAQMETAEAYGMSRRQAFWRIMVPQMWVYALPGLGNLWMVLIKA 212

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 213 TPLLFLLGVEDIV 225


>gi|16760251|ref|NP_455868.1| amino acid ABC transporter [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141981|ref|NP_805323.1| amino acid ABC transporter [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|167549882|ref|ZP_02343640.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168230056|ref|ZP_02655114.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168235758|ref|ZP_02660816.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168819432|ref|ZP_02831432.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194470226|ref|ZP_03076210.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194735220|ref|YP_002114662.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|204927693|ref|ZP_03218894.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|213160972|ref|ZP_03346682.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426275|ref|ZP_03359025.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213581183|ref|ZP_03363009.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213611267|ref|ZP_03370093.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213650141|ref|ZP_03380194.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855810|ref|ZP_03384050.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224583872|ref|YP_002637670.1| amino acid ABC transporter [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|289805033|ref|ZP_06535662.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
 gi|289825681|ref|ZP_06544852.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25296627|pir||AF0665 probable amino acid ABC transporter STY1435 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16502546|emb|CAD01695.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137610|gb|AAO69172.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|194456590|gb|EDX45429.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194710722|gb|ACF89943.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197291169|gb|EDY30522.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204323035|gb|EDZ08231.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205325103|gb|EDZ12942.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205335486|gb|EDZ22250.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205343853|gb|EDZ30617.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|224468399|gb|ACN46229.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322614886|gb|EFY11811.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619326|gb|EFY16206.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623138|gb|EFY19980.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628428|gb|EFY25216.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634835|gb|EFY31566.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638600|gb|EFY35295.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641011|gb|EFY37658.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645406|gb|EFY41934.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322651709|gb|EFY48081.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654391|gb|EFY50713.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661231|gb|EFY57457.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665005|gb|EFY61193.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667749|gb|EFY63909.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671839|gb|EFY67960.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677115|gb|EFY73179.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680222|gb|EFY76261.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685349|gb|EFY81345.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323194288|gb|EFZ79484.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198153|gb|EFZ83263.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204385|gb|EFZ89393.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205838|gb|EFZ90801.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211050|gb|EFZ95907.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217167|gb|EGA01888.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222862|gb|EGA07220.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227243|gb|EGA11413.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232027|gb|EGA16134.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234554|gb|EGA18641.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238007|gb|EGA22066.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243392|gb|EGA27411.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248906|gb|EGA32831.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253700|gb|EGA37527.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258734|gb|EGA42393.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261766|gb|EGA45336.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266513|gb|EGA50000.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271237|gb|EGA54664.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 226

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           H    KA+  LY+  F+  G P   LI + + +++  P  G    I  S+ +       +
Sbjct: 51  HRPVVKAITRLYMDFFI--GTP---LILILFVIYYGLPQSG----IHLSSFTVAVTGFTL 101

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y AA++     +   A+ + + EAA+  GL  R+    ++LPQ + S IP LT+Q 
Sbjct: 102 NVGAYNAAYMT----TAYNALNKYETEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQV 157

Query: 332 LNLLKNSSLAVAVGFAD 348
           +N LK+S++   + + +
Sbjct: 158 INNLKDSTIVFLIQYTE 174


>gi|323967296|gb|EGB62719.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli M863]
 gi|327253648|gb|EGE65277.1| arginine transport system permease protein artM [Escherichia coli
           STEC_7v]
          Length = 222

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPTLQEYPVLWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCSALGMS-KKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 167 TITLMEVMGYSQLLYGRT 184


>gi|171778131|ref|ZP_02919388.1| hypothetical protein STRINF_00223 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283113|gb|EDT48537.1| hypothetical protein STRINF_00223 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 267

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 4/103 (3%)

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  
Sbjct: 130 AFAFNEAAYTSETIRAAIQAVNVGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINSL 189

Query: 332 LNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIW 370
           + L K +SLA   G    FA    +GG+      + I + L++
Sbjct: 190 IGLTKGTSLAFNAGIVEIFAQAQILGGSDYRYFERYISVALVY 232


>gi|266625008|ref|ZP_06117943.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288863103|gb|EFC95401.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 219

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 32/174 (18%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYT 277
           PL+    F+ +GLP       K  +  D    G     F+GGS +S  F           
Sbjct: 64  PLMVQLFFIYYGLP-------KIGIQTDAAACGVAGLAFLGGSYMSEAF----------- 105

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
                   RSG+ AV   Q E+A +LGL+  +    V+LPQA    +P   +  + LLK 
Sbjct: 106 --------RSGIEAVAPIQEESAYSLGLSKLQTFSYVILPQAFSISVPAFMANVIFLLKE 157

Query: 338 SSLAVAVGFADLVSVGGTIIN---QTGQAIEIILI-WMFIYLSLSIMIALFMNR 387
           +S+  A+   DL+     +I    +T +++ ++++ ++ I L +S++ +L   R
Sbjct: 158 TSVFSAISLMDLMFTAKDLIGLYYKTAESLFLLVVFYLIILLPVSVLGSLLERR 211


>gi|145633093|ref|ZP_01788825.1| arginine ABC transporter permease protein [Haemophilus influenzae
           3655]
 gi|144986319|gb|EDJ92898.1| arginine ABC transporter permease protein [Haemophilus influenzae
           3655]
          Length = 227

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 19/183 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA-- 279
           LY++ F   G P LV    ++ L +  P  GQF +I     SP +  L  A  C   A  
Sbjct: 51  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWI---IDSPLWYVLSNAWFCAALALA 99

Query: 280 -----FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
                +  ++    + A+P+GQ E+  ALGL +R  T  +L+P A++  +P  +++ + +
Sbjct: 100 LNSAAYSTQLFHGAVKAIPKGQWESCGALGL-NRIQTLKILIPYALKRALPSYSNEIILV 158

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            K ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+  
Sbjct: 159 FKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLA 218

Query: 395 KEK 397
            E+
Sbjct: 219 FER 221


>gi|145639303|ref|ZP_01794909.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittII]
 gi|145271606|gb|EDK11517.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittII]
 gi|301169916|emb|CBW29520.1| arginine transporter subunit [Haemophilus influenzae 10810]
 gi|309751179|gb|ADO81163.1| Arginine ABC transporter, permease protein ArtM [Haemophilus
           influenzae R2866]
          Length = 227

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 19/183 (10%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA-- 279
           LY++ F   G P LV    ++ L +  P  GQF +I     SP +  L  A  C   A  
Sbjct: 51  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWI---IDSPLWYVLSNAWFCAALALA 99

Query: 280 -----FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
                +  ++    + A+P+GQ E+  ALGL +R  T  +L+P A++  +P  +++ + +
Sbjct: 100 LNSAAYSTQLFHGAVKAIPKGQWESCGALGL-NRIQTLKILIPYALKRALPSYSNEIILV 158

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            K ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+  
Sbjct: 159 FKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLA 218

Query: 395 KEK 397
            E+
Sbjct: 219 FER 221


>gi|170770016|ref|ZP_02904469.1| arginine ABC transporter, permease protein ArtM [Escherichia
           albertii TW07627]
 gi|170121082|gb|EDS90013.1| arginine ABC transporter, permease protein ArtM [Escherichia
           albertii TW07627]
          Length = 222

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A++  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCSALGMS-KKDTLAILLPYALKRSLSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 167 TITLMEVMGYSQLLYGRT 184


>gi|84502691|ref|ZP_01000810.1| ABC transporter, permease protein, HisMQ family protein [Oceanicola
           batsensis HTCC2597]
 gi|84389086|gb|EAQ01884.1| ABC transporter, permease protein, HisMQ family protein [Oceanicola
           batsensis HTCC2597]
          Length = 291

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 38/60 (63%)

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+ QME A A G+T R+AT  VL+PQ     +P L++ ++ L+K + L   +G  D+V
Sbjct: 166 AVPKAQMETAEAYGMTRRQATWRVLVPQMWIYALPGLSNLWMILIKATPLLFLLGIEDVV 225


>gi|292487795|ref|YP_003530670.1| arginine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292899025|ref|YP_003538394.1| arginine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198873|emb|CBJ45983.1| arginine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291553217|emb|CBA20262.1| Arginine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
 gi|312171914|emb|CBX80171.1| Arginine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 223

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P +   +++  S +S  ++   +ALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSVQNVSWLW-SLLSQPWLCALLALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            +    + A+P GQ +A  ALG+  +   R +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 LLFHGAVRAIPSGQWQACAALGMDRKDQLR-ILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +++  G  +  +T   I +      +YL ++ ++ L M  +  +    E++
Sbjct: 167 TITLMEVMGQGQLLYGRT-YDIGVFAAAGVVYLCVNGLLTLLMRLIERRALAFERR 221


>gi|289177408|gb|ADC84654.1| Transporter [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 253

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 24/137 (17%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +  PLL    FL FGLP +  +        +   +    F+GGS             
Sbjct: 94  EVSRNTPLLVQLYFLYFGLPKMGFV-----WSAELCAIVGLGFLGGS------------- 135

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                 ++AE +R+GL +VP+ Q E A  LG    +    V++PQA+    P + +  + 
Sbjct: 136 ------YMAESMRAGLQSVPQIQRENAYMLGFNTWQTLTRVIVPQAVSISTPGIVANVIF 189

Query: 334 LLKNSSLAVAVGFADLV 350
           L+K SS+  A+  AD++
Sbjct: 190 LIKESSVVSAIALADVM 206


>gi|254441207|ref|ZP_05054700.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198251285|gb|EDY75600.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 269

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 8/147 (5%)

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           GQ+ F    T +  ++   I L   T+A+  EI    L ++P+G  EAA A GL+     
Sbjct: 104 GQYAFFDPFTAA--WLGALIVLFLNTSAYTGEIFYGALQSIPKGDTEAADAFGLSGWSRF 161

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF------ADLVSVGGTIINQTGQAIE 365
           R V+ P  +R   P  T++ + L  +++L    GF       D +       ++T     
Sbjct: 162 RRVIWPTMLRLAWPAYTNEAIFLFHSTTLVYFSGFPAWGQKGDALYYASFFADKTFNPFV 221

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
              I  F ++ L+++I   M R+  ++
Sbjct: 222 PYPILAFYFILLTLVIIAIMGRIGRRL 248


>gi|206578455|ref|YP_002239814.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|206567513|gb|ACI09289.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
          Length = 221

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 101/214 (47%), Gaps = 22/214 (10%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           F TL +   A +   + ++GI L  F+      + +K    + + ++S  L+  +P L+L
Sbjct: 19  FATLELFITAALA--ALIIGIALCYFS-----EYQKKVINRIIIGFVS--LMRAIPFLIL 69

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
               Y L++  P LG         +S E + +  +AL  Y  A+  EI+RS       G 
Sbjct: 70  ---AYLLYYGLPQLG---------ISMESWTAGLLALIIYHGAYFFEILRSQRRVFSGGY 117

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAAIA G +     R ++LP  + S +P + +Q +  LK+++    +   ++ +   ++
Sbjct: 118 IEAAIAQGFSRYAIFRRIILPNIISSALPLIGNQLIICLKDTAFLSIITVQEITAAANSV 177

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                      ++ + +Y ++SI++ L + RL A
Sbjct: 178 QATYFIPFNAFIVAIGLYWAISILLELLIKRLTA 211


>gi|297519677|ref|ZP_06938063.1| arginine transporter permease subunit ArtM [Escherichia coli OP50]
          Length = 181

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 10  YITLFT--GTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCAL-IALSLNSAAYTT 66

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 67  QLFYGAIRAIPEGQWQSCSALGMS-KKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAY 125

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 126 TITLMEVMGYSQLLYGRT 143


>gi|213420764|ref|ZP_03353830.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 227

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           H    KA+  LY+  F+  G P   LI + + +++  P  G    I  S+ +       +
Sbjct: 51  HRPVVKAITRLYMDFFI--GTP---LILILFVIYYGLPQSG----IHLSSFTVAVTGFTL 101

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y AA++     +   A+ + + EAA+  GL  R+    ++LPQ + S IP LT+Q 
Sbjct: 102 NVGAYNAAYMT----TAYNALNKYETEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQV 157

Query: 332 LNLLKNSSLAVAVGFAD 348
           +N LK+S++   + + +
Sbjct: 158 INNLKDSTIVFLIQYTE 174


>gi|293391347|ref|ZP_06635681.1| arginine transport system permease protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951881|gb|EFE02000.1| arginine transport system permease protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 228

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 13/180 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYT 277
           LY++ F   G P LV    ++ L +  P  GQF +I  S     +S  +    +AL+  +
Sbjct: 52  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWIVNSPLWSVLSNAWFCAALALALNS 103

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  ++    + A+P+GQ E+  ALGL+ R  T  +L+P A++  +P  +++ + + K 
Sbjct: 104 AAYSTQLFHGAVKAIPKGQWESCEALGLS-RFQTLKILIPYALKRALPSYSNEIILVFKG 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++LA  +   D++     +      A+ I  I   IYL ++ +  L + RL  K+   E+
Sbjct: 163 TALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRRLENKVLAFER 222


>gi|259418506|ref|ZP_05742424.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
 gi|259345901|gb|EEW57745.1| binding-protein-dependent transport systems inner membrane
           component [Silicibacter sp. TrichCH4B]
          Length = 260

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G+T R+    VL+PQ     +P L++ ++ L+K 
Sbjct: 116 GAFAANVLFGAMRAVPRAQIETAEAYGMTTRQTFWRVLVPQMWVYALPGLSNLWMVLIKA 175

Query: 338 SSLAVAVGFADLV----SVGGT 355
           + L   +G  D+V     +GG+
Sbjct: 176 TPLLFLLGVEDIVYWARELGGS 197


>gi|256847113|ref|ZP_05552559.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256715777|gb|EEU30752.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 236

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 24/163 (14%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + + G+  PLL    FL +G P L                       G  +S E  S  I
Sbjct: 73  YVEVGRNTPLLIQLFFLYYGFPVL-----------------------GMKLSAE-ASGII 108

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L     A++AE    G   + + Q++A +ALG+   +  R V+LPQ +   +P L++  
Sbjct: 109 GLIFLGGAYMAEGFTGGFNGIGKSQIDAGLALGMNQWELARYVVLPQGLALSVPALSANV 168

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + L+K +S+   +   +L +    +I    ++ E +L+ +  Y
Sbjct: 169 IFLIKETSIFSVIAIPELTNTALDLIGMYYRSNEYLLVLVIAY 211



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           GF  T WL+F G++ + I+G LV   R     +++ I   YVEV RN P L+ +FFLY
Sbjct: 33  GFQLTLWLSFVGIVGSLIVGVLVSLVRYFKIPIISKILGAYVEVGRNTPLLIQLFFLY 90


>gi|251788811|ref|YP_003003532.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537432|gb|ACT06053.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 50/84 (59%), Gaps = 3/84 (3%)

Query: 271 IALSCYT---AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +A+S +T    A+ A  + +   A+ + + EAA+  G +  +  RL++LPQ + + +P L
Sbjct: 94  VAVSGFTLNVGAYNAAYMTTAYNALNKHETEAAVVQGFSSWQIFRLIILPQVLITSVPAL 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVS 351
           T+Q +N +K+S++A  + + +  S
Sbjct: 154 TNQVINNIKDSTIAFLIQYTEFFS 177


>gi|145631224|ref|ZP_01786997.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           R3021]
 gi|144983151|gb|EDJ90646.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           R3021]
          Length = 227

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 20/209 (9%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   L+LF T L    ++   +A+ L Y++ F   G P LV    ++ L +  P  GQF 
Sbjct: 26  IAFCLALFLTFLLSMENKWVKRAVNL-YLTLFT--GTPLLV----QFFLIYAGP--GQFQ 76

Query: 256 FIGGSTVSPEFMSLYIALSCYTAA-------FIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +I     SP +  L  A  C   A       +  ++    + A+P+GQ E+  ALGL +R
Sbjct: 77  WI---IDSPLWYVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCGALGL-NR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
             T  +L+P A++  +P   ++ + + K ++LA  +   D++     +      AI I  
Sbjct: 133 IQTLKILIPYALKRALPSYGNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYG 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I   IYL ++ +  L + +L  K+   E+
Sbjct: 193 IAGGIYLIITGIATLLLRKLETKVLAFER 221


>gi|295109249|emb|CBL23202.1| ABC-type polar amino acid transport system, ATPase component
           [Ruminococcus obeum A2-162]
          Length = 162

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 5/75 (6%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           CY      E  R G++++  GQ E A A+G+TH +    V+LPQA+R+I+P + +  +  
Sbjct: 5   CYV-----EFFRGGILSIDPGQTEGAKAIGMTHVQTMINVILPQALRNIMPQIGNNLIIN 59

Query: 335 LKNSSLAVAVGFADL 349
           +K++ +   +G  +L
Sbjct: 60  IKDTCVLSIIGTVEL 74


>gi|328948881|ref|YP_004366218.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328449205|gb|AEB14921.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 234

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 59/100 (59%), Gaps = 1/100 (1%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++S E  S+ +  + +  A + ++VR  L ++PR Q E+A ++GL  ++    V++PQ
Sbjct: 94  GISISGEAASVLV-FTLWGTAEMGDLVRGALESIPRHQYESAKSIGLNEKQIYIYVIIPQ 152

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
            +R +IP   +    ++K +S+ V VG  ++V +G  II+
Sbjct: 153 TLRRLIPLAMNLITRMIKTTSIVVFVGVIEVVKIGQQIID 192


>gi|99081554|ref|YP_613708.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
 gi|99037834|gb|ABF64446.1| binding-protein-dependent transport systems inner membrane
           component [Ruegeria sp. TM1040]
          Length = 302

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF A ++   + AVPR Q+E A A G+T R+    VL+PQ     +P L++ ++ L+K 
Sbjct: 158 GAFAANVLFGAMRAVPRAQIETAEAYGMTPRQTFWRVLVPQMWVYALPGLSNLWMVLIKA 217

Query: 338 SSLAVAVGFADLV 350
           + L   +G  D+V
Sbjct: 218 TPLLFLLGVEDIV 230


>gi|769793|emb|CAA60104.1| artM [Escherichia coli K-12]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 5/176 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVRIFLIYYGPGQFPTLQEYPALWHLLSEPWLCAL-IALSVNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCSALGMS-KKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +++     +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 167 TITLMEVMGYSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKAVAFERR 221


>gi|311280248|ref|YP_003942479.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749443|gb|ADO49195.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +    +S  ++   IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPSLQEYPVLW-HLLSEPWLCAMIALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPDGQWQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++  G  +  +T
Sbjct: 167 TITLMEVMGHGQLLYGRT 184


>gi|16764980|ref|NP_460595.1| ABC-type transport system membrane component [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|161613901|ref|YP_001587866.1| hypothetical protein SPAB_01639 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167992812|ref|ZP_02573908.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168241191|ref|ZP_02666123.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168260167|ref|ZP_02682140.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168462913|ref|ZP_02696844.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194446763|ref|YP_002040884.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194448646|ref|YP_002045676.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|197263771|ref|ZP_03163845.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198243706|ref|YP_002215512.1| putative ABC transporter membrane component [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200390145|ref|ZP_03216756.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|16420162|gb|AAL20554.1| putative ABC-type transport system probable membrane spanning
           protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|161363265|gb|ABX67033.1| hypothetical protein SPAB_01639 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194405426|gb|ACF65648.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194406950|gb|ACF67169.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195634262|gb|EDX52614.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197242026|gb|EDY24646.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197938222|gb|ACH75555.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602590|gb|EDZ01136.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|205329069|gb|EDZ15833.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205339633|gb|EDZ26397.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205350636|gb|EDZ37267.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|261246829|emb|CBG24643.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267993566|gb|ACY88451.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158164|emb|CBW17661.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912624|dbj|BAJ36598.1| putative ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|323129905|gb|ADX17335.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|326623258|gb|EGE29603.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
 gi|326627747|gb|EGE34090.1| putative ABC-type transport system membrane component [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 226

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           H    KA+  LY+  F+  G P   LI + + +++  P  G    I  S+ +       +
Sbjct: 51  HRPVVKAITRLYMDFFI--GTP---LILILFVIYYGLPQSG----IHLSSFTVAVTGFTL 101

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y AA++     +   A+ + + EAA+  GL  R+    ++LPQ + S IP LT+Q 
Sbjct: 102 NVGAYNAAYMT----TAYNALNKYETEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQV 157

Query: 332 LNLLKNSSLAVAVGFAD 348
           +N LK+S++   + + +
Sbjct: 158 INNLKDSTIVFLIQYTE 174


>gi|229844867|ref|ZP_04465005.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           6P18H1]
 gi|229812248|gb|EEP47939.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           6P18H1]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 20/209 (9%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   L+LF T L    ++   +A+ L Y++ F   G P LV    ++ L +  P  GQF 
Sbjct: 26  IAFCLALFLTFLLSMENKWVKRAVNL-YLTLFT--GTPLLV----QFFLIYAGP--GQFQ 76

Query: 256 FIGGSTVSPEFMSLYIALSCYTAA-------FIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +I     SP +  L  A  C   A       +  ++    + A+P+GQ E+  ALGL +R
Sbjct: 77  WI---IDSPLWYVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCGALGL-NR 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
             T  +L+P A++  +P  +++ + + K ++LA  +   D++     +      A+ I  
Sbjct: 133 IQTLKILIPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDALTIYG 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I   IYL ++ +  L + +L  K+   E+
Sbjct: 193 IAGGIYLIITGIATLLLRKLEKKVLAFER 221


>gi|194433179|ref|ZP_03065461.1| arginine ABC transporter, permease protein ArtM [Shigella
           dysenteriae 1012]
 gi|194418676|gb|EDX34763.1| arginine ABC transporter, permease protein ArtM [Shigella
           dysenteriae 1012]
 gi|332091020|gb|EGI96110.1| arginine transport system permease protein artM [Shigella
           dysenteriae 155-74]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPSQFPTLQEYPALWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCSALGMS-KKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 167 TITLMEVMGYSQLLYGRT 184


>gi|110679185|ref|YP_682192.1| histidine ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109455301|gb|ABG31506.1| histidine ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 248

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 7/113 (6%)

Query: 251 LGQFNFIGGSTVSPEF-------MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            G F F+   +VSP F       +   I L   TAA+  EI    L ++P+G  EAA A 
Sbjct: 74  FGYFLFLSLKSVSPIFDPFTAAWLGALIVLFLNTAAYSGEIFYGALQSIPKGDTEAADAY 133

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           G+T     R V+ P  +R   P  T++ + L   ++L    GF      G  +
Sbjct: 134 GMTGWPRFRRVIWPTMLRLAWPAYTNEAIFLFHATALVFLSGFPAWQQRGDAL 186


>gi|315633805|ref|ZP_07889094.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Aggregatibacter segnis ATCC 33393]
 gi|315477055|gb|EFU67798.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Aggregatibacter segnis ATCC 33393]
          Length = 226

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 13/180 (7%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV----SPEFMSLYIALSCYT 277
           LY++ F   G P LV    ++ L +  P  GQF +I  S +    S  +    +AL+  +
Sbjct: 51  LYLTLFT--GTPLLV----QFFLIYAGP--GQFQWIVDSPLWLLFSNAWFCAALALALNS 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  ++    + A+P+GQ E+  ALGL+ R  T  +LLP A++  +P  +++ + + K 
Sbjct: 103 AAYSTQLFHGAVKAIPKGQWESCEALGLS-RLQTLKILLPYALKRALPSYSNEIILVFKG 161

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++LA  +   D++     +      A+ I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 162 TALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLVITGIATLLLRKLENKVLAFER 221


>gi|301065539|ref|YP_003787562.1| putative amino acid ABC transporter permease [Lactobacillus casei
           str. Zhang]
 gi|300437946|gb|ADK17712.1| putative amino acid ABC transporter, permease protein
           [Lactobacillus casei str. Zhang]
          Length = 228

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 9/184 (4%)

Query: 212 HEKTGKALPLLYIS-TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           H    + L LLY     L+   P L+L+ L +   +  P+L Q   I  S  +    ++ 
Sbjct: 42  HFSHSRVLELLYNGFVSLMRATPVLLLLMLVF---YGMPLLFQLVGIDISWWAKTSFAI- 97

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+    +A+ +E +RS   ++P+ Q +A  +L  +   A R +L PQ   + +P + + 
Sbjct: 98  LAIGLENSAYFSENLRSAYASLPQSQYDACTSLHFSRIAAIRRILGPQVFAAALPNIGNT 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNR 387
            + ++KNS+    +G  DL      II Q     Q + + +    IY ++   I  F  +
Sbjct: 158 LITIVKNSAYVYVIGITDLYE-QAQIIAQASFGKQQVVVFIALSLIYWAICAAIQAFFTQ 216

Query: 388 LNAK 391
           L  +
Sbjct: 217 LERR 220


>gi|213419685|ref|ZP_03352751.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
          Length = 124

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 34/48 (70%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +
Sbjct: 77  RLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMK 124



 Score = 37.4 bits (85), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 10/70 (14%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-------KSVLSVLPIPD--- 160
           GT++   RLS+   +AW  + YV VFR+IP ++V+ + Y       ++VL + P  D   
Sbjct: 19  GTILAVMRLSSFAPIAWFAKGYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRL 78

Query: 161 HSIVLPFGMF 170
            S ++ F MF
Sbjct: 79  ISAMVAFSMF 88


>gi|207856866|ref|YP_002243517.1| amino acid ABC transporter [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|206708669|emb|CAR32995.1| putative amino acid ABC transporter [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 226

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           H    KA+  LY+  F+  G P   LI + + +++  P  G    I  S+ +       +
Sbjct: 51  HRPVVKAITRLYMDFFI--GTP---LILILFVIYYGLPQSG----IHLSSFTVAVTGFTL 101

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y AA++     +   A+ + + EAA+  GL  R+    ++LPQ + S IP LT+Q 
Sbjct: 102 NVGAYNAAYMT----TAYNALNKYETEAAVVQGLNKRQVFLWIILPQVLLSSIPALTNQV 157

Query: 332 LNLLKNSSLAVAVGFAD 348
           +N LK+S++   + + +
Sbjct: 158 INNLKDSTIVFLIQYTE 174


>gi|237732154|ref|ZP_04562635.1| arginine transporter permease subunit ArtM [Citrobacter sp. 30_2]
 gi|226907693|gb|EEH93611.1| arginine transporter permease subunit ArtM [Citrobacter sp. 30_2]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPALQEYPVLWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCGALGMS-KKDTLAILLPYAFKRALSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 167 TITLMEVMGYSQLLYGRT 184


>gi|299535030|ref|ZP_07048356.1| D-methionine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298729526|gb|EFI70075.1| D-methionine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 223

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 22/207 (10%)

Query: 191 VFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +FS ++GI L L    TR  + F  K       L+I+  ++  +P ++L  L + L F K
Sbjct: 31  LFSILIGIPLGLLIVLTRPGQSFENKFFYQFFNLFIN--IVRSVPFIIL--LFFILPFTK 86

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            ++G       +T+  +   + + L  YTA +IA ++ S L+ V  G +EA  A+G+  R
Sbjct: 87  LIVG-------TTIGVK--GVIVPLVVYTAPYIARLMESALLEVDSGVVEAYTAMGIKRR 137

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIE 365
                VLL +A  SII  LT   + L+  +++A  VG   L    G +  + G     ++
Sbjct: 138 HIIWHVLLREARPSIILGLTIATIGLIGATAMAGMVGAGGL----GDLAYRYGHLRYEVD 193

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++   +FI + L   I    NR  AK+
Sbjct: 194 VMYATVFILIILVQSIQSIGNRFAAKL 220


>gi|257484550|ref|ZP_05638591.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 127

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L     
Sbjct: 4   GQHEAAAALGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQ 63

Query: 355 TIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAK 391
            I N+T   I +++   +W  I  +L      ++ R  A+
Sbjct: 64  VIYNRTQAVIPLLIVATVWYLIITTLLTSAQYYVERHFAR 103


>gi|237808727|ref|YP_002893167.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500988|gb|ACQ93581.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA++    A+ AEI+R+G+ A P+GQ EA   LGLT  +    ++LP A + I   L  Q
Sbjct: 95  IAMTVNLGAYSAEILRAGIEATPKGQWEAGRTLGLTRFQIFTRIVLPPAFQRIYSSLVGQ 154

Query: 331 YLNLLKNSSLAVAVGFADL 349
            + ++  SS+   +   +L
Sbjct: 155 CIIVMLGSSVISQISVEEL 173


>gi|113866838|ref|YP_725327.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525614|emb|CAJ91959.1| ABC-type transporter, permease component: MUT family [Ralstonia
           eutropha H16]
          Length = 217

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            FI GS++     +  + L+     FIA +V S L  V +G +EAA ++G T R+    V
Sbjct: 80  RFIVGSSIGTT--AAIVPLTIAAIPFIARLVESALREVDKGLVEAAQSMGATTRQIVWKV 137

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSL 340
           LLP+AM  I+  LT  +++L+  S++
Sbjct: 138 LLPEAMPGIVAGLTITFVSLVGYSAM 163


>gi|170742606|ref|YP_001771261.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196880|gb|ACA18827.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 232

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 9/130 (6%)

Query: 226 TFLIFGLPTLVLIALKY-----QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T ++ G+P L++I L Y      L     + G   F+G     P F     AL   + A+
Sbjct: 60  TTILRGVPDLLVIYLLYFGGSAALGSVAGLFGATGFVG----LPPFAVGVGALGIISGAY 115

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE+ R   +A+ RG +EAA A+G++     R V+ P   R+ +P L + +  LLK+S+L
Sbjct: 116 QAEVFRGAYLALDRGLIEAARAVGMSPALLFRRVVAPLVARTALPGLGNVWQILLKDSAL 175

Query: 341 AVAVGFADLV 350
               G  +L+
Sbjct: 176 VSVTGLVELL 185


>gi|82777623|ref|YP_403972.1| arginine transporter permease subunit ArtM [Shigella dysenteriae
           Sd197]
 gi|309785092|ref|ZP_07679725.1| arginine transport system permease protein artM [Shigella
           dysenteriae 1617]
 gi|81241771|gb|ABB62481.1| arginine 3rd transport system permease protein [Shigella
           dysenteriae Sd197]
 gi|308927462|gb|EFP72936.1| arginine transport system permease protein artM [Shigella
           dysenteriae 1617]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCSALGMS-KKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 167 TITLMEVMGYSQLLYGRT 184


>gi|15800616|ref|NP_286630.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 EDL933]
 gi|15830198|ref|NP_308971.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. Sakai]
 gi|16128829|ref|NP_415382.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112231|ref|NP_706741.1| arginine transporter permease subunit ArtM [Shigella flexneri 2a
           str. 301]
 gi|26246884|ref|NP_752924.1| arginine transporter permease subunit ArtM [Escherichia coli
           CFT073]
 gi|30062343|ref|NP_836514.1| arginine transporter permease subunit ArtM [Shigella flexneri 2a
           str. 2457T]
 gi|82543349|ref|YP_407296.1| arginine transporter permease subunit ArtM [Shigella boydii Sb227]
 gi|89107712|ref|AP_001492.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91209895|ref|YP_539881.1| arginine transporter permease subunit ArtM [Escherichia coli UTI89]
 gi|110641062|ref|YP_668792.1| arginine transporter permease subunit ArtM [Escherichia coli 536]
 gi|110804858|ref|YP_688378.1| arginine transporter permease subunit ArtM [Shigella flexneri 5
           str. 8401]
 gi|117623041|ref|YP_851954.1| arginine transporter permease subunit ArtM [Escherichia coli APEC
           O1]
 gi|157155015|ref|YP_001462059.1| arginine transporter permease subunit ArtM [Escherichia coli
           E24377A]
 gi|157160384|ref|YP_001457702.1| arginine transporter permease subunit ArtM [Escherichia coli HS]
 gi|168750050|ref|ZP_02775072.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4113]
 gi|168756660|ref|ZP_02781667.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4401]
 gi|168763284|ref|ZP_02788291.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767376|ref|ZP_02792383.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4486]
 gi|168776407|ref|ZP_02801414.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4196]
 gi|168779418|ref|ZP_02804425.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787087|ref|ZP_02812094.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC869]
 gi|168799852|ref|ZP_02824859.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC508]
 gi|170020736|ref|YP_001725690.1| arginine transporter permease subunit ArtM [Escherichia coli ATCC
           8739]
 gi|170080520|ref|YP_001729840.1| arginine ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|187734247|ref|YP_001880942.1| arginine transporter permease subunit ArtM [Shigella boydii CDC
           3083-94]
 gi|188494552|ref|ZP_03001822.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           53638]
 gi|191166212|ref|ZP_03028046.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           B7A]
 gi|191172103|ref|ZP_03033647.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           F11]
 gi|193064475|ref|ZP_03045556.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E22]
 gi|193069388|ref|ZP_03050343.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E110019]
 gi|194428166|ref|ZP_03060709.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           B171]
 gi|194438469|ref|ZP_03070559.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           101-1]
 gi|195936910|ref|ZP_03082292.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809637|ref|ZP_03251974.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816065|ref|ZP_03257244.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822686|ref|ZP_03263005.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4042]
 gi|209396120|ref|YP_002269534.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4115]
 gi|209918110|ref|YP_002292194.1| arginine transporter permease subunit ArtM [Escherichia coli SE11]
 gi|215485992|ref|YP_002328423.1| arginine transporter permease subunit ArtM [Escherichia coli
           O127:H6 str. E2348/69]
 gi|217325635|ref|ZP_03441719.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. TW14588]
 gi|218553447|ref|YP_002386360.1| arginine transporter permease subunit ArtM [Escherichia coli IAI1]
 gi|218557765|ref|YP_002390678.1| arginine transporter permease subunit ArtM [Escherichia coli S88]
 gi|218688643|ref|YP_002396855.1| arginine transporter permease subunit ArtM [Escherichia coli ED1a]
 gi|218694335|ref|YP_002402002.1| arginine transporter permease subunit ArtM [Escherichia coli 55989]
 gi|218699237|ref|YP_002406866.1| arginine transporter permease subunit ArtM [Escherichia coli IAI39]
 gi|227884175|ref|ZP_04001980.1| arginine transporter permease subunit ArtM [Escherichia coli 83972]
 gi|237707175|ref|ZP_04537656.1| arginine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|238900120|ref|YP_002925916.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|253774109|ref|YP_003036940.1| arginine transporter permease subunit ArtM [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160976|ref|YP_003044084.1| arginine transporter permease ArtM [Escherichia coli B str. REL606]
 gi|254792060|ref|YP_003076897.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. TW14359]
 gi|256021018|ref|ZP_05434883.1| arginine transporter permease subunit ArtM [Shigella sp. D9]
 gi|256023512|ref|ZP_05437377.1| arginine transporter permease subunit ArtM [Escherichia sp.
           4_1_40B]
 gi|260843112|ref|YP_003220890.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O103:H2 str. 12009]
 gi|260854153|ref|YP_003228044.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O26:H11 str. 11368]
 gi|260867034|ref|YP_003233436.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O111:H- str. 11128]
 gi|261225515|ref|ZP_05939796.1| arginine transporter subunit; membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258516|ref|ZP_05951049.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O157:H7 str. FRIK966]
 gi|291281863|ref|YP_003498681.1| Arginine transport system permease protein artM [Escherichia coli
           O55:H7 str. CB9615]
 gi|293414142|ref|ZP_06656791.1| artM [Escherichia coli B185]
 gi|293433159|ref|ZP_06661587.1| artM [Escherichia coli B088]
 gi|300817039|ref|ZP_07097258.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300824002|ref|ZP_07104124.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300902394|ref|ZP_07120377.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300921108|ref|ZP_07137492.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300924470|ref|ZP_07140440.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300929329|ref|ZP_07144803.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300947048|ref|ZP_07161270.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300957065|ref|ZP_07169310.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300991845|ref|ZP_07179670.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300993465|ref|ZP_07180407.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301020605|ref|ZP_07184682.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|301027625|ref|ZP_07190946.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301051211|ref|ZP_07198040.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|301305367|ref|ZP_07211462.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301646301|ref|ZP_07246191.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306812690|ref|ZP_07446883.1| arginine transporter permease subunit ArtM [Escherichia coli NC101]
 gi|307137489|ref|ZP_07496845.1| arginine transporter permease subunit ArtM [Escherichia coli H736]
 gi|307311751|ref|ZP_07591391.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309795344|ref|ZP_07689762.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|312969072|ref|ZP_07783279.1| arginine transport system permease protein artM [Escherichia coli
           2362-75]
 gi|312970985|ref|ZP_07785164.1| arginine transport system permease protein artM [Escherichia coli
           1827-70]
 gi|331641382|ref|ZP_08342517.1| arginine transport system permease protein ArtM [Escherichia coli
           H736]
 gi|331646129|ref|ZP_08347232.1| arginine transport system permease protein ArtM [Escherichia coli
           M605]
 gi|331651879|ref|ZP_08352898.1| arginine transport system permease protein ArtM [Escherichia coli
           M718]
 gi|331656934|ref|ZP_08357896.1| arginine transport system permease protein ArtM [Escherichia coli
           TA206]
 gi|331662273|ref|ZP_08363196.1| arginine transport system permease protein ArtM [Escherichia coli
           TA143]
 gi|331667235|ref|ZP_08368100.1| arginine transport system permease protein ArtM [Escherichia coli
           TA271]
 gi|331672400|ref|ZP_08373191.1| arginine transport system permease protein ArtM [Escherichia coli
           TA280]
 gi|331676649|ref|ZP_08377345.1| arginine transport system permease protein ArtM [Escherichia coli
           H591]
 gi|83287902|sp|P0AE32|ARTM_ECO57 RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|83287903|sp|P0AE31|ARTM_ECOL6 RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|83287904|sp|P0AE30|ARTM_ECOLI RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|83287905|sp|P0AE33|ARTM_SHIFL RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|12513882|gb|AAG55240.1|AE005267_5 arginine 3rd transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|26107284|gb|AAN79467.1|AE016758_71 Arginine transport system permease protein artM [Escherichia coli
           CFT073]
 gi|1651394|dbj|BAA35575.1| arginine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1787086|gb|AAC73948.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13360403|dbj|BAB34367.1| arginine 3rd transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|24051078|gb|AAN42448.1| arginine 3rd transport system permease protein [Shigella flexneri
           2a str. 301]
 gi|30040588|gb|AAP16320.1| arginine 3rd transport system permease protein [Shigella flexneri
           2a str. 2457T]
 gi|81244760|gb|ABB65468.1| arginine 3rd transport system permease protein [Shigella boydii
           Sb227]
 gi|91071469|gb|ABE06350.1| arginine 3rd transport system permease protein [Escherichia coli
           UTI89]
 gi|110342654|gb|ABG68891.1| arginine transport system permease protein ArtM [Escherichia coli
           536]
 gi|110614406|gb|ABF03073.1| arginine 3rd transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|115512165|gb|ABJ00240.1| arginine 3rd transport system permease protein [Escherichia coli
           APEC O1]
 gi|157066064|gb|ABV05319.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           HS]
 gi|157077045|gb|ABV16753.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E24377A]
 gi|169755664|gb|ACA78363.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169888355|gb|ACB02062.1| arginine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187431239|gb|ACD10513.1| arginine ABC transporter, permease protein ArtM [Shigella boydii
           CDC 3083-94]
 gi|187768229|gb|EDU32073.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4196]
 gi|188015742|gb|EDU53864.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4113]
 gi|188489751|gb|EDU64854.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           53638]
 gi|189003025|gb|EDU72011.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4076]
 gi|189356287|gb|EDU74706.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363350|gb|EDU81769.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4486]
 gi|189366529|gb|EDU84945.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4501]
 gi|189373035|gb|EDU91451.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC869]
 gi|189377762|gb|EDU96178.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC508]
 gi|190903821|gb|EDV63536.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           B7A]
 gi|190907630|gb|EDV67225.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           F11]
 gi|192928937|gb|EDV82550.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E22]
 gi|192957341|gb|EDV87789.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E110019]
 gi|194413726|gb|EDX30005.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           B171]
 gi|194422693|gb|EDX38690.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           101-1]
 gi|208729438|gb|EDZ79039.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732713|gb|EDZ81401.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738171|gb|EDZ85854.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4042]
 gi|209157520|gb|ACI34953.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4115]
 gi|209775318|gb|ACI85971.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775320|gb|ACI85972.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775322|gb|ACI85973.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775324|gb|ACI85974.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775326|gb|ACI85975.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209911369|dbj|BAG76443.1| arginine ABC transporter permease component [Escherichia coli SE11]
 gi|215264064|emb|CAS08406.1| arginine 3rd transport system permease protein ArtM; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|217321856|gb|EEC30280.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. TW14588]
 gi|218351067|emb|CAU96771.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218360215|emb|CAQ97765.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218364534|emb|CAR02216.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218369223|emb|CAR16978.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218426207|emb|CAR07031.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|222032590|emb|CAP75329.1| Arginine transport system permease protein artM [Escherichia coli
           LF82]
 gi|226898385|gb|EEH84644.1| arginine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|227838927|gb|EEJ49393.1| arginine transporter permease subunit ArtM [Escherichia coli 83972]
 gi|238860007|gb|ACR62005.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|242376677|emb|CAQ31389.1| artM, subunit of arginine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325153|gb|ACT29755.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972877|gb|ACT38548.1| arginine transporter subunit [Escherichia coli B str. REL606]
 gi|253977091|gb|ACT42761.1| arginine transporter subunit [Escherichia coli BL21(DE3)]
 gi|254591460|gb|ACT70821.1| arginine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|257752802|dbj|BAI24304.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O26:H11 str. 11368]
 gi|257758259|dbj|BAI29756.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O103:H2 str. 12009]
 gi|257763390|dbj|BAI34885.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O111:H- str. 11128]
 gi|260449992|gb|ACX40414.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177996|dbj|BAI54326.1| arginine ABC transporter permease component [Escherichia coli SE15]
 gi|281600184|gb|ADA73168.1| Arginine 3rd transport system permease protein [Shigella flexneri
           2002017]
 gi|284920714|emb|CBG33777.1| arginine ABC transporter, permease protein [Escherichia coli 042]
 gi|290761736|gb|ADD55697.1| Arginine transport system permease protein artM [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323978|gb|EFE63400.1| artM [Escherichia coli B088]
 gi|291434200|gb|EFF07173.1| artM [Escherichia coli B185]
 gi|294493629|gb|ADE92385.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           IHE3034]
 gi|299879261|gb|EFI87472.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300297118|gb|EFJ53503.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300305455|gb|EFJ59975.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300316150|gb|EFJ65934.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300398623|gb|EFJ82161.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300405541|gb|EFJ89079.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300406579|gb|EFJ90117.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300411959|gb|EFJ95269.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300419355|gb|EFK02666.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300453331|gb|EFK16951.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300462748|gb|EFK26241.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300523513|gb|EFK44582.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300530391|gb|EFK51453.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300839385|gb|EFK67145.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301075458|gb|EFK90264.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|305853453|gb|EFM53892.1| arginine transporter permease subunit ArtM [Escherichia coli NC101]
 gi|306908306|gb|EFN38805.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307552704|gb|ADN45479.1| arginine transport system permease protein [Escherichia coli ABU
           83972]
 gi|307627730|gb|ADN72034.1| arginine transporter permease subunit ArtM [Escherichia coli UM146]
 gi|308120994|gb|EFO58256.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|309701139|emb|CBJ00437.1| arginine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|310336746|gb|EFQ01913.1| arginine transport system permease protein artM [Escherichia coli
           1827-70]
 gi|312286474|gb|EFR14387.1| arginine transport system permease protein artM [Escherichia coli
           2362-75]
 gi|312945378|gb|ADR26205.1| arginine transporter permease subunit ArtM [Escherichia coli O83:H1
           str. NRG 857C]
 gi|313650232|gb|EFS14644.1| arginine transport system permease protein artM [Shigella flexneri
           2a str. 2457T]
 gi|315060146|gb|ADT74473.1| arginine transporter subunit [Escherichia coli W]
 gi|315135510|dbj|BAJ42669.1| arginine transport system permease protein artM [Escherichia coli
           DH1]
 gi|315257897|gb|EFU37865.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315287307|gb|EFU46718.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315292536|gb|EFU51888.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315299390|gb|EFU58642.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|320175301|gb|EFW50407.1| Arginine ABC transporter, permease protein ArtM [Shigella
           dysenteriae CDC 74-1112]
 gi|320177805|gb|EFW52791.1| Arginine ABC transporter, permease protein ArtM [Shigella boydii
           ATCC 9905]
 gi|320183199|gb|EFW58057.1| Arginine ABC transporter, permease protein ArtM [Shigella flexneri
           CDC 796-83]
 gi|320192654|gb|EFW67295.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC1212]
 gi|320196644|gb|EFW71267.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           WV_060327]
 gi|320199096|gb|EFW73693.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           EC4100B]
 gi|320637731|gb|EFX07523.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. G5101]
 gi|320642854|gb|EFX12055.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H- str. 493-89]
 gi|320648311|gb|EFX16966.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H- str. H 2687]
 gi|320654149|gb|EFX22217.1| arginine transporter permease subunit ArtM [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320659773|gb|EFX27329.1| arginine transporter permease subunit ArtM [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320664243|gb|EFX31394.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323155765|gb|EFZ41934.1| arginine transport system permease protein artM [Escherichia coli
           EPECa14]
 gi|323159683|gb|EFZ45662.1| arginine transport system permease protein artM [Escherichia coli
           E128010]
 gi|323172172|gb|EFZ57810.1| arginine transport system permease protein artM [Escherichia coli
           LT-68]
 gi|323175517|gb|EFZ61112.1| arginine transport system permease protein artM [Escherichia coli
           1180]
 gi|323185175|gb|EFZ70540.1| arginine transport system permease protein artM [Escherichia coli
           1357]
 gi|323190683|gb|EFZ75952.1| arginine transport system permease protein artM [Escherichia coli
           RN587/1]
 gi|323379296|gb|ADX51564.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323937968|gb|EGB34230.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1520]
 gi|323942778|gb|EGB38943.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E482]
 gi|323947115|gb|EGB43126.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H120]
 gi|323953435|gb|EGB49301.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H252]
 gi|323958150|gb|EGB53859.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H263]
 gi|323962974|gb|EGB58546.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H489]
 gi|323969575|gb|EGB64863.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TA007]
 gi|324009773|gb|EGB78992.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324013023|gb|EGB82242.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|324015941|gb|EGB85160.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324116075|gb|EGC09999.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1167]
 gi|326338245|gb|EGD62074.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. 1125]
 gi|326346222|gb|EGD69960.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. 1044]
 gi|331038180|gb|EGI10400.1| arginine transport system permease protein ArtM [Escherichia coli
           H736]
 gi|331044881|gb|EGI17008.1| arginine transport system permease protein ArtM [Escherichia coli
           M605]
 gi|331050157|gb|EGI22215.1| arginine transport system permease protein ArtM [Escherichia coli
           M718]
 gi|331055182|gb|EGI27191.1| arginine transport system permease protein ArtM [Escherichia coli
           TA206]
 gi|331060695|gb|EGI32659.1| arginine transport system permease protein ArtM [Escherichia coli
           TA143]
 gi|331065591|gb|EGI37484.1| arginine transport system permease protein ArtM [Escherichia coli
           TA271]
 gi|331070595|gb|EGI41959.1| arginine transport system permease protein ArtM [Escherichia coli
           TA280]
 gi|331075338|gb|EGI46636.1| arginine transport system permease protein ArtM [Escherichia coli
           H591]
 gi|332088880|gb|EGI93992.1| arginine transport system permease protein artM [Shigella boydii
           5216-82]
 gi|332097160|gb|EGJ02143.1| arginine transport system permease protein artM [Shigella boydii
           3594-74]
 gi|332104597|gb|EGJ07943.1| arginine transporter subunit [Shigella sp. D9]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 4/138 (2%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I L Y      P L ++  +      P   +L IALS  +AA+  
Sbjct: 51  YITLFT--GTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCAL-IALSLNSAAYTT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++    + A+P GQ ++  ALG++ +K T  +LLP A +  +   +++ + + K++SLA 
Sbjct: 108 QLFYGAIRAIPEGQWQSCSALGMS-KKDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAY 166

Query: 343 AVGFADLVSVGGTIINQT 360
            +   +++     +  +T
Sbjct: 167 TITLMEVMGYSQLLYGRT 184


Searching..................................................done


Results from round 2




>gi|254780171|ref|YP_003064584.1| ABC transporter membrane spanning protein (amino acid) [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039848|gb|ACT56644.1| ABC transporter membrane spanning protein (amino acid) [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 398

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 398/398 (100%), Positives = 398/398 (100%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG
Sbjct: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
           IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS
Sbjct: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT
Sbjct: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL
Sbjct: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA
Sbjct: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT
Sbjct: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK
Sbjct: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398


>gi|315122674|ref|YP_004063163.1| ABC transporter membrane spanning protein (amino acid) [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313496076|gb|ADR52675.1| ABC transporter membrane spanning protein (amino acid) [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 398

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 301/398 (75%), Positives = 347/398 (87%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M+KN +      F  MKFLYD+R+ +I +Q ++  ++T++ LW VNNV++NM KSNLSLG
Sbjct: 1   MMKNIKSMFNHNFCEMKFLYDVRIRSILIQAVILSIVTMVILWLVNNVHHNMVKSNLSLG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
           IGFL ERAGFEIDQGI+PYTSDSSYA AI+VGF NTF +AF+G+IPATIIG LVG GRLS
Sbjct: 61  IGFLKERAGFEIDQGIIPYTSDSSYAMAIVVGFSNTFMVAFAGIIPATIIGVLVGTGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           +NKLV+WICRVYVEVFRNIPPLVVIFF Y+SVLS+LPIP+HSI LP G+FLNNRG SFPT
Sbjct: 121 SNKLVSWICRVYVEVFRNIPPLVVIFFWYRSVLSILPIPEHSISLPLGIFLNNRGFSFPT 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L MD NAKI +FSFVLGI LS+F+ +LSR FH KTG+ LPL Y++  LI GLP LVL+AL
Sbjct: 181 LIMDINAKIVLFSFVLGIALSIFSAKLSRQFHMKTGQTLPLFYVAVLLILGLPMLVLLAL 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +QL+FDKPVLG+FNF GG T+ PEFMSLYIALSCYTA+FIAEI+R GLI+V RGQMEAA
Sbjct: 241 NFQLYFDKPVLGKFNFTGGCTIGPEFMSLYIALSCYTASFIAEIIRLGLISVSRGQMEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           IALGLT  KATRLV+LPQAMR IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG+IINQT
Sbjct: 301 IALGLTPGKATRLVILPQAMRIIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGSIINQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           GQAIEIILIWMFIYLSLSIMI+LFMN LN K+ALKE++
Sbjct: 361 GQAIEIILIWMFIYLSLSIMISLFMNWLNTKVALKERR 398


>gi|260563784|ref|ZP_05834270.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|260153800|gb|EEW88892.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
          Length = 454

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 191/404 (47%), Positives = 263/404 (65%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSR--------MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNME 53
            +  RK +  YF             LYD R   I  Q+++   +     W V N   N++
Sbjct: 51  AERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQ 110

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG L
Sbjct: 111 RANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFL 170

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VG GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NN
Sbjct: 171 VGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINN 230

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RG   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP
Sbjct: 231 RGFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLP 290

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V 
Sbjct: 291 ILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVS 350

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VG
Sbjct: 351 KGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVG 410

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GTI+NQTGQA+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 411 GTILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|294852107|ref|ZP_06792780.1| general L-amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|294820696|gb|EFG37695.1| general L-amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 454

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 190/404 (47%), Positives = 263/404 (65%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSR--------MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNME 53
            +  RK +  YF             LYD R   I  Q+++   +     W V N   N++
Sbjct: 51  AERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQ 110

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG L
Sbjct: 111 RANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFL 170

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VG GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NN
Sbjct: 171 VGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINN 230

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RG   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP
Sbjct: 231 RGFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLP 290

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V 
Sbjct: 291 ILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVS 350

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VG
Sbjct: 351 KGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVG 410

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GTI+NQTG+A+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 411 GTILNQTGRAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|148560133|ref|YP_001258724.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148371390|gb|ABQ61369.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
          Length = 454

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 191/404 (47%), Positives = 263/404 (65%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSR--------MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNME 53
            +  RK +  YF             LYD R   I  Q+++   +     W V N   N++
Sbjct: 51  AERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQ 110

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG L
Sbjct: 111 RANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFL 170

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VG GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NN
Sbjct: 171 VGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINN 230

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RG   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP
Sbjct: 231 RGFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLP 290

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V 
Sbjct: 291 ILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVS 350

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VG
Sbjct: 351 KGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVG 410

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GTI+NQTGQA+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 411 GTILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|225627244|ref|ZP_03785281.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225617249|gb|EEH14294.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
          Length = 454

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 190/404 (47%), Positives = 263/404 (65%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSR--------MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNME 53
            +  RK +  YF             LYD R   I  Q+++   +     W V N   N++
Sbjct: 51  AERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQ 110

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N++ G GF+  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG L
Sbjct: 111 RANIASGFGFIYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFL 170

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VG GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NN
Sbjct: 171 VGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINN 230

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RG   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP
Sbjct: 231 RGFFMPSPVWGEGAWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLP 290

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V 
Sbjct: 291 ILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVS 350

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VG
Sbjct: 351 KGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVG 410

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GTI+NQTGQA+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 411 GTILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|265999519|ref|ZP_05466765.2| polar amino acid ABC transporter [Brucella melitensis bv. 2 str.
           63/9]
 gi|263094478|gb|EEZ18300.1| polar amino acid ABC transporter [Brucella melitensis bv. 2 str.
           63/9]
          Length = 454

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 191/404 (47%), Positives = 264/404 (65%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSR--------MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNME 53
            +  RK +  YF             LYD+R   I  Q+++   +     W V N   N++
Sbjct: 51  AERHRKHMASYFGTERRQGSGGTSLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQ 110

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG L
Sbjct: 111 RANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFL 170

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VG GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NN
Sbjct: 171 VGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINN 230

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           RG   P+      A     + ++GI+ S    R ++     TG+    + +S  LI GLP
Sbjct: 231 RGFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLP 290

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V 
Sbjct: 291 ILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVS 350

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VG
Sbjct: 351 KGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVG 410

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GTI+NQTGQA+E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 411 GTILNQTGQAVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 454


>gi|239831566|ref|ZP_04679895.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239823833|gb|EEQ95401.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 408

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 193/397 (48%), Positives = 266/397 (67%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M   +     +       LYD RV  I  Q+I+  ++     W V N   N++++N++ G
Sbjct: 12  MASYSATERRQDSGGTSLLYDPRVRGIFYQVIVFGVVIGAIYWIVGNTVTNLQRANIASG 71

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            GFLS RAGF+I Q ++ Y+SDS+Y  A LVG +NT ++A  G++ A+IIG LVG GRLS
Sbjct: 72  FGFLSGRAGFDISQTLIQYSSDSNYGRAFLVGLMNTLYVAALGVVTASIIGFLVGIGRLS 131

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    SI LP G ++NNRG   P 
Sbjct: 132 RNWLIRKICTVYVEVFRNIPPLLVIFFWYFGVLSVLPQARDSIALPLGTYMNNRGFFMPA 191

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                 A +   + ++GIV S+   R ++     TG+    + ++  LI GLP L LIA 
Sbjct: 192 PVWGEGAWLLPVALLIGIVASIVIARWAKRRQMATGQPFHTIRVAAALIIGLPVLALIAT 251

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + + FD P LG FN  GG+ V PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA
Sbjct: 252 GFPISFDLPKLGTFNLTGGAQVKPEFLALFLALSFYTASFIAETVRAGVLGVNKGQTEAA 311

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQT
Sbjct: 312 YAVGLRPGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQT 371

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQ++E++ IWM IYL +S++ +  MN  NAK+AL E+
Sbjct: 372 GQSVEVVAIWMVIYLGISLITSGLMNWFNAKMALVER 408


>gi|153009883|ref|YP_001371098.1| polar amino acid ABC transporter inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561771|gb|ABS15269.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 397

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 191/397 (48%), Positives = 265/397 (66%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M   +     +       LYD R+  I  Q+I+   +     W V N   N++++N++ G
Sbjct: 1   MASYSATERRQDSGGTSLLYDPRIRGIFYQVIVFGAVIGAIYWIVGNTITNLQRANIASG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             FL+ RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G+I A+IIG LVG GRLS
Sbjct: 61  FAFLNGRAGFDISQTLIQYNSDSNYGRAFLVGLVNTLYVAALGVITASIIGFLVGIGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N L+  IC VYVE+FRNIPPL+VIFF Y  VLSVLP    S  LP G +LNNRG   P+
Sbjct: 121 RNWLIRKICTVYVEIFRNIPPLLVIFFWYFGVLSVLPQARDSFSLPLGTYLNNRGFFMPS 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                 A +   + ++GIV S+   R ++     TG++   + +S  LI GLP L LIA 
Sbjct: 181 PIWGEGAWLLPVALLIGIVASIIVARWAKRRQMATGQSFHTIRVSAALIIGLPILALIAT 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA
Sbjct: 241 GFPVSFDSPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVNKGQTEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+GL   +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQT
Sbjct: 301 YAVGLRPGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQ++E++ IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 361 GQSVEVVAIWMVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|260463340|ref|ZP_05811541.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259030930|gb|EEW32205.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 395

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 194/384 (50%), Positives = 259/384 (67%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           SR  F+ D +V ++  Q ++ ++L     W V NV +N+++ +++ G GFL  RAGF+I 
Sbjct: 12  SRASFVNDPKVRSLFFQTLVVIVLFGSVWWIVQNVIDNLQRLHIASGFGFLRGRAGFDIS 71

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
              + YTSDS+Y  AI+VG +NT  +A +G+I ATIIG ++G GRLS N L+  IC VYV
Sbjct: 72  DTPIAYTSDSTYGRAIVVGLINTIIVAVAGIITATIIGFVIGIGRLSQNWLIQKICTVYV 131

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRNIPPL+VIFF Y  VL+VLP P  S  LPFG FLN RG  FP       + + + +
Sbjct: 132 EIFRNIPPLLVIFFWYSGVLAVLPPPRDSYNLPFGSFLNQRGFYFPRPVWGDGSWLILVA 191

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            V+GI ++ F  R +R     TG+  P+L+ S  LI GLP L  +   + L FD P    
Sbjct: 192 LVVGIAMAWFVARKARQRQMATGQQFPVLWTSVALIVGLPLLAYVLSGFPLSFDLPKQST 251

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN  GG  V PEF+SLY+ALSCYTAAFIAEIVR+G+  V +GQ EAA ALGL      RL
Sbjct: 252 FNLTGGFQVKPEFLSLYLALSCYTAAFIAEIVRAGIRGVSKGQTEAAAALGLRSGSILRL 311

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL +  GT++NQTGQA+E +LI M  
Sbjct: 312 VVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQAVEGVLIMMIA 371

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL LS++ +  MN +NA++AL E+
Sbjct: 372 YLILSLVTSAVMNVVNARMALVER 395


>gi|17987493|ref|NP_540127.1| general L-amino acid transport system permease protein aapQ
           [Brucella melitensis bv. 1 str. 16M]
 gi|256044432|ref|ZP_05447336.1| general L-amino acid transport system permease protein aapQ
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|265990853|ref|ZP_06103410.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17983191|gb|AAL52391.1| general l-amino acid transport system permease protein aapq
           [Brucella melitensis bv. 1 str. 16M]
 gi|263001637|gb|EEZ14212.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 397

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 187/387 (48%), Positives = 258/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAV 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|163843015|ref|YP_001627419.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163673738|gb|ABY37849.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 397

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 257/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGIVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++ ++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLAPFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLMKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|254707030|ref|ZP_05168858.1| amino acid ABC transporter, permease protein [Brucella
           pinnipedialis M163/99/10]
 gi|254718862|ref|ZP_05180673.1| amino acid ABC transporter, permease protein [Brucella sp. 83/13]
 gi|256369176|ref|YP_003106684.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261314498|ref|ZP_05953695.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|265983847|ref|ZP_06096582.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306837635|ref|ZP_07470505.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|255999336|gb|ACU47735.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261303524|gb|EEY07021.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|264662439|gb|EEZ32700.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306407284|gb|EFM63493.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 397

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 187/387 (48%), Positives = 258/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|13476742|ref|NP_108311.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14027503|dbj|BAB53772.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 395

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 193/384 (50%), Positives = 258/384 (67%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            R  F+ D ++ ++  Q ++ ++L     W V NV +N+++ +++ G GFL  RAGF+I 
Sbjct: 12  GRASFINDPKIRSLFFQTLVVIVLFGSVWWIVQNVIDNLQRLHIASGFGFLRGRAGFDIS 71

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
              + YTSDS+Y  AI+VG +NT  +A +G+I ATIIG ++G GRLS N L+  IC VYV
Sbjct: 72  DTPIAYTSDSTYGRAIVVGLINTVIVAVAGIITATIIGFVIGIGRLSQNWLIQKICTVYV 131

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EVFRNIPPL+VIFF Y  VL+VLP P  S  LPFG FLN RG  FP       + + V +
Sbjct: 132 EVFRNIPPLLVIFFWYSGVLAVLPAPRDSYHLPFGSFLNQRGFYFPRPVWGEGSWLIVVA 191

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++GI ++ F  R +R     TG+  P+L+ S  LI GLP L  +   + L FD P    
Sbjct: 192 LLVGIAMAWFVARTARQRQMATGQQFPVLWTSVALIVGLPLLAYVLSGFPLSFDLPKQST 251

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN  GG  V PEF+SLY+ALSCYTAAFIAEIVR+G+  V +GQ EAA ALGL      RL
Sbjct: 252 FNLTGGFQVKPEFLSLYLALSCYTAAFIAEIVRAGIRGVSKGQTEAAAALGLRSGSILRL 311

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL +  GT++NQTGQA+E +LI M  
Sbjct: 312 VVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQAVEGVLIMMIA 371

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL LS++ +  MN +NA++AL E+
Sbjct: 372 YLILSLVTSAVMNVVNARMALVER 395


>gi|306843689|ref|ZP_07476289.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306275999|gb|EFM57708.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
          Length = 397

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 187/387 (48%), Positives = 258/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QDSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGWAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWTL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|256113276|ref|ZP_05454144.1| general L-amino acid transport system permease protein aapQ
           [Brucella melitensis bv. 3 str. Ether]
 gi|265994689|ref|ZP_06107246.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|262765802|gb|EEZ11591.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
          Length = 397

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 187/387 (48%), Positives = 258/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAV 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHAIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|306842008|ref|ZP_07474681.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306287849|gb|EFM59269.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 397

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 187/387 (48%), Positives = 257/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QDSGGTSLLYDPRARGIFYQVVVFGAVIAGLYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G+I A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVITASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S      ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVAHWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|254713862|ref|ZP_05175673.1| amino acid ABC transporter, permease protein [Brucella ceti
           M644/93/1]
 gi|254717081|ref|ZP_05178892.1| amino acid ABC transporter, permease protein [Brucella ceti
           M13/05/1]
 gi|261218892|ref|ZP_05933173.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261321609|ref|ZP_05960806.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|260923981|gb|EEX90549.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261294299|gb|EEX97795.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
          Length = 397

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 258/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ D+V+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDVVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|256060863|ref|ZP_05451023.1| amino acid ABC transporter, permease protein [Brucella neotomae
           5K33]
 gi|261324860|ref|ZP_05964057.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261300840|gb|EEY04337.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
          Length = 397

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 257/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   +  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGVFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQARRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|23501630|ref|NP_697757.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|161618713|ref|YP_001592600.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|254704069|ref|ZP_05165897.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|260566683|ref|ZP_05837153.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261754727|ref|ZP_05998436.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|23347547|gb|AAN29672.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|161335524|gb|ABX61829.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|260156201|gb|EEW91281.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261744480|gb|EEY32406.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
          Length = 397

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 257/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  I  
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGIVTASIIGFLVGIGRLSHNWLIRNIST 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|256159475|ref|ZP_05457243.1| amino acid ABC transporter, permease protein [Brucella ceti
           M490/95/1]
 gi|256254761|ref|ZP_05460297.1| amino acid ABC transporter, permease protein [Brucella ceti B1/94]
 gi|260168487|ref|ZP_05755298.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261221940|ref|ZP_05936221.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261757955|ref|ZP_06001664.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|265997903|ref|ZP_06110460.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|260920524|gb|EEX87177.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261737939|gb|EEY25935.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|262552371|gb|EEZ08361.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
          Length = 397

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 258/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GF+  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFIYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|225852261|ref|YP_002732494.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis ATCC 23457]
 gi|225640626|gb|ACO00540.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
          Length = 397

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 187/387 (48%), Positives = 259/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD+R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAV 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|254701520|ref|ZP_05163348.1| amino acid ABC transporter, permease protein [Brucella suis bv. 5
           str. 513]
 gi|261752068|ref|ZP_05995777.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261741821|gb|EEY29747.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 397

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 186/387 (48%), Positives = 257/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LY  R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYGPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAL 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|326408765|gb|ADZ65830.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis M28]
 gi|326538483|gb|ADZ86698.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M5-90]
          Length = 397

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 187/387 (48%), Positives = 258/387 (66%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD+R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDLRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P       A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPLPVWGEGAWAV 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IW
Sbjct: 311 MRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIW 370

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M IYL +S++++  MN  NAK+AL E+
Sbjct: 371 MVIYLGISLIVSGLMNWFNAKMALVER 397


>gi|319784339|ref|YP_004143815.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170227|gb|ADV13765.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 395

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 195/384 (50%), Positives = 256/384 (66%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           SR  F+ D ++  I  Q+++ +LL     W  +NV +N+ +  ++ G GFL  RAGF+I 
Sbjct: 12  SRGSFINDPKIRGIFFQVLVVVLLVAGVWWIAHNVIDNLTRLRIASGFGFLKGRAGFDIS 71

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +  + Y+SDS+Y  AILVG +NT  +A  G+I ATIIG ++G GRLS N L+  IC VYV
Sbjct: 72  ESAIAYSSDSTYGRAILVGLLNTVIVAIVGIITATIIGFVIGIGRLSKNWLIRKICTVYV 131

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EVFRNIPPL+VIFF Y  VL+VLP P  SI LPFG FLN RG  FP       + +   +
Sbjct: 132 EVFRNIPPLLVIFFWYSGVLAVLPAPRDSINLPFGSFLNQRGFYFPRAVWGDGSWLIFVA 191

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++GI ++ F  R +R     TG+  P+ + S  LI GLP L      + L FD P    
Sbjct: 192 LLVGIAMAWFVARKARQRQMATGQQFPVFWTSAALIVGLPLLAYALSGFPLSFDYPKQST 251

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN  GG  V PEF+SLY+ALSCYTAAFIAEIVR+G+  V  GQ EAA ALGL      RL
Sbjct: 252 FNLTGGFQVRPEFLSLYLALSCYTAAFIAEIVRAGIRGVSAGQTEAAGALGLRSGSILRL 311

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQAMR +IPPLTSQYLNL KNSSLA+A+G+ DL +  GT++NQTGQA+E ++I M I
Sbjct: 312 VVVPQAMRIVIPPLTSQYLNLTKNSSLAIAIGYPDLTATAGTVLNQTGQAVEGVVIMMVI 371

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL++S++ +L MN  NAK+AL E+
Sbjct: 372 YLAISLLTSLVMNWFNAKMALVER 395


>gi|209966386|ref|YP_002299301.1| general L-amino acid transport system permease protein AapQ
           [Rhodospirillum centenum SW]
 gi|209959852|gb|ACJ00489.1| general L-amino acid transport system permease protein AapQ
           [Rhodospirillum centenum SW]
          Length = 396

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 175/393 (44%), Positives = 244/393 (62%), Gaps = 2/393 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R        R   L D  V  +  Q  +ALLL ++  + V+N   N+ +  ++ G GFL
Sbjct: 6   PRDAAAPPVRRRLSLNDPFVRAVLWQAGVALLLGLVAWYLVSNTMENLARQAVATGYGFL 65

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
              AGF + +  +PY+   +Y  A LVG +NT  +A  G++ AT++G L+G  RLS N L
Sbjct: 66  DMPAGFHVGEAPIPYSPTDTYGRAFLVGILNTLKVAAIGIVLATVLGVLLGIARLSGNWL 125

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           VA +   YVEV RN+P L+ +F  Y  +   LP P  ++    G+FL+NRGL  P     
Sbjct: 126 VAKLSAGYVEVVRNVPLLLQLFLWYGLLTEALPGPRQALEPVPGVFLSNRGLKLPAPGEG 185

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ +++ + GI L++  +  +R     TG+ LP+  I T L+ GLP LVL+AL   L
Sbjct: 186 GGWELALYALLAGIALTVALSFWNRRRQAATGRRLPMGTIGTGLVAGLPALVLLALGAPL 245

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D P L  FNF GG+T++PE  +L   L  YTAAFI EIVRSG++AVP+GQ EAA ALG
Sbjct: 246 --DVPELRGFNFAGGATLTPELSALLFGLVAYTAAFIGEIVRSGILAVPQGQTEAARALG 303

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  RLV+LPQA+R I+PP TSQYLNL KNSSLAVA+G+ D VS+  T INQTGQA+
Sbjct: 304 LSGGQTMRLVVLPQALRVIVPPTTSQYLNLTKNSSLAVAIGYPDFVSIVNTTINQTGQAL 363

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E +   M +YL++SI ++L MN  NA+IALKE+
Sbjct: 364 EGVAAVMAVYLTISIALSLLMNWYNARIALKER 396


>gi|307942365|ref|ZP_07657716.1| general L-amino acid transport system permease protein AapQ
           [Roseibium sp. TrichSKD4]
 gi|307774651|gb|EFO33861.1| general L-amino acid transport system permease protein AapQ
           [Roseibium sp. TrichSKD4]
          Length = 392

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 169/383 (44%), Positives = 234/383 (61%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           R   L D +V  +  Q++L   L     + V+N   N+E+ N+S G  FL   AGF I Q
Sbjct: 10  RASLLNDPKVRGLFYQVLLVAFLVAGGWFIVSNTAANLERQNISSGFDFLKNTAGFGISQ 69

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
             + Y+  SSY  AI++GF+NT  +A  G+  ATIIG +VG  RLS N +++ +   YVE
Sbjct: 70  TPIEYSETSSYGRAIVIGFLNTLLVAVFGIFFATIIGFVVGISRLSTNWVISKLAYWYVE 129

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           + RN+P L+ I F Y  ++   P P  S+ L  G  LNNRG   P       A   + + 
Sbjct: 130 IVRNVPLLLQILFWYLLLIESTPSPRKSVELGAGAVLNNRGFFLPKPIWGDVAVYSLAAL 189

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++GI+ +      +R   E TG+  P+   +   I G P LV +     + F+ PVL  F
Sbjct: 190 IIGIIATFVIRSWARKRQELTGQQFPVGLTALGAIIGFPLLVFLITGLPVQFEYPVLKGF 249

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N++GG  + PEF++L  ALS YTAAFIAEIVR+G+ AV  GQ EAA ALGL +    RLV
Sbjct: 250 NYVGGQRLIPEFLALLFALSIYTAAFIAEIVRAGIQAVSHGQTEAAHALGLRNSPTLRLV 309

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQAMR +IPP+TSQYLNL KNSSLAVA+ F DLV+ G  ++NQ+G+AIEI+ IWM +Y
Sbjct: 310 VIPQAMRVMIPPMTSQYLNLTKNSSLAVAIAFPDLVANGQIVMNQSGRAIEIVGIWMVVY 369

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           LSLS+  + FMN  N ++AL E+
Sbjct: 370 LSLSLGTSAFMNWYNKRMALVER 392


>gi|222148881|ref|YP_002549838.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735867|gb|ACM36830.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 398

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 202/382 (52%), Positives = 276/382 (72%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
              +YD +V  I  Q++  ++L        NN  +N++K+N++ G GFL  R+GF+I Q 
Sbjct: 17  ASLIYDPKVRGIFYQVVTLVILVAFIWMVANNTIHNLQKANITSGFGFLQGRSGFDIGQQ 76

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y+SDS+Y  A+LVG +NT  +A +G+I A+IIG  VG GRLS N L+A +C+VYVE+
Sbjct: 77  LISYSSDSTYGRALLVGLLNTLQVAAAGIITASIIGFAVGLGRLSHNWLIAKLCQVYVEI 136

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRNIPPL+VIFF Y+ V+++LP    SI LPF ++LNNRG++FP       A + + +  
Sbjct: 137 FRNIPPLLVIFFWYRGVIAILPQARDSIALPFDIYLNNRGITFPKAIFGDEAWLLLPAIA 196

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GIVLS+   + +R     TG+  P+L+ S  LI GLP LV +A+   L FD P++G+FN
Sbjct: 197 IGIVLSILLRKWARKRQMATGQQFPILWSSLALILGLPVLVFMAIGMPLTFDLPIVGRFN 256

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             GGS V PEF SL++ALS YTAAFIAEIVR G+ AV +GQ EAA ALGL H   +RL++
Sbjct: 257 MQGGSVVGPEFTSLFLALSFYTAAFIAEIVRGGIKAVSKGQTEAASALGLKHNHTSRLIV 316

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQAMR IIPPLTSQYLNL KNSSLAVA+GFAD+V+VGGTI+NQTGQA+EI+ +W+ +YL
Sbjct: 317 VPQAMRIIIPPLTSQYLNLAKNSSLAVAIGFADIVAVGGTILNQTGQAVEIVAVWLAVYL 376

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           ++SI  A+FMN  NAK+AL E+
Sbjct: 377 TISISTAVFMNWFNAKMALVER 398


>gi|116251959|ref|YP_767797.1| general L-amino acid transport system permease [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|3182888|sp|Q52813|AAPQ_RHIL3 RecName: Full=General L-amino acid transport system permease
           protein AapQ
 gi|1154895|emb|CAA57934.1| general amino acid ABC type transporter [Rhizobium leguminosarum]
 gi|115256607|emb|CAK07695.1| General L-amino acid transport system permease [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 400

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 213/400 (53%), Positives = 272/400 (68%), Gaps = 3/400 (0%)

Query: 1   MIKNARKTVT---RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNL 57
           M   A  T       +S    +YD +  +I  QI+  ++L     W  +N   N+ +SN 
Sbjct: 1   MTHEAVDTTPLHGTGWSFRSAMYDPKYRSIFYQILTIVILVGFVWWVAHNTAVNLARSNT 60

Query: 58  SLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG 117
           + G GFL  RAGFEI Q ++ ++SDS+YA A+LVG +NT  +A +G+  ATIIG L+G G
Sbjct: 61  ASGFGFLRGRAGFEIGQSLITFSSDSTYARALLVGILNTLLVAVTGIFTATIIGFLIGIG 120

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           RLS N L+A +C VYVEVFRNIPPL+VIFF Y  VLSVLP P  S+ LPF M+LNNRGL+
Sbjct: 121 RLSRNWLIAKLCTVYVEVFRNIPPLLVIFFWYLGVLSVLPQPRESVGLPFSMYLNNRGLA 180

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           FP    DT       + V+ IV S+   R +      TG+    ++ +  LI GLP LV 
Sbjct: 181 FPKPIFDTGMIAVGIALVIAIVASIIIARWAHKRQAATGQPFHTVWTAIALIVGLPLLVF 240

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +   + L FD PV G+FN  GGS V PEFMSL++ALS YTA+FIAEIVR G+  VP+GQ 
Sbjct: 241 VVSGFPLTFDVPVAGKFNLTGGSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVPKGQS 300

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALGL     TRLV++PQA+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+
Sbjct: 301 EAAGALGLHPSSVTRLVVVPQALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTIL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQ+GQAIEI+ IW  +YLSLSI+ +LFMN  NAK+AL E+
Sbjct: 361 NQSGQAIEIVCIWGIVYLSLSILTSLFMNWFNAKMALVER 400


>gi|302188403|ref|ZP_07265076.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 393

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 158/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  FV S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFVVSLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|330899537|gb|EGH30956.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 393

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVIAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|237799856|ref|ZP_04588317.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022711|gb|EGI02768.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 393

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 156/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVISLGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTESDTYARVFVIGLLNTLLVSVIGIVLATLLGFIIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I++ MN  N +IAL E+
Sbjct: 374 SISISMLMNWYNKRIALIER 393


>gi|83648449|ref|YP_436884.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83636492|gb|ABC32459.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 395

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 174/388 (44%), Positives = 242/388 (62%), Gaps = 1/388 (0%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +  ++ K   D  V ++  Q++    +   FL+ +NN   NME+  ++ G  FL ++AGF
Sbjct: 8   QDKAKTKIWNDPAVRSVFFQVLAVGAVVAFFLYIINNALTNMEQRGITTGFAFLGDQAGF 67

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I Q ++ Y    S+     VG +NT  +A  G+I ATI+G  +G GRLS N L++ +  
Sbjct: 68  GILQSLIEYDETHSFGRTFFVGLLNTVLVAVLGIILATILGFFIGIGRLSHNWLISKLAT 127

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            Y+E FRNIP L+ IFF Y +VL  LP P +S+ +   +F N RGL  P    +      
Sbjct: 128 TYIETFRNIPLLLQIFFWYFAVLQGLPSPRNSMSIGESVFFNIRGLYLPGPVYEDGFGAV 187

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            F+ V+ I + +   R  R    +TGK  PL   S  ++ GLP +V       +H+D PV
Sbjct: 188 AFAIVVAIGIIIGLVRFERKRQRETGKTFPLFLPSVGILCGLPLIVYFLAGSPMHWDYPV 247

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  FNF GG T+ PE ++L IAL+ YTAAFIAE+VRSG+ A+PRGQ EAA ALGL++ + 
Sbjct: 248 LTGFNFKGGLTIIPELIALLIALTVYTAAFIAEVVRSGIEAIPRGQSEAANALGLSNGQR 307

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILI 369
            RLV++PQAMR IIPP+T+QYLNL KNSSLA A+G+ DLVSV  GT +NQTGQAIEII +
Sbjct: 308 LRLVIIPQAMRVIIPPMTNQYLNLTKNSSLATAIGYPDLVSVFMGTTLNQTGQAIEIIFM 367

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M +YL LS+  +  MN  N++IAL E+
Sbjct: 368 TMAVYLFLSLSTSALMNWYNSRIALVER 395


>gi|289678217|ref|ZP_06499107.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 393

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|330950964|gb|EGH51224.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae Cit 7]
          Length = 393

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLVSLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|66044326|ref|YP_234167.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63255033|gb|AAY36129.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 393

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|331008999|gb|EGH89055.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 393

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y  V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTPVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|330962156|gb|EGH62416.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 393

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 156/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVISLGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I++ MN  N +IAL E+
Sbjct: 374 SISISMLMNWYNKRIALIER 393


>gi|71736483|ref|YP_273399.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257487409|ref|ZP_05641450.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289628606|ref|ZP_06461560.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289647199|ref|ZP_06478542.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|298485801|ref|ZP_07003880.1| ABC-type amino acid transport system, permease component yhdX
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|71557036|gb|AAZ36247.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298159827|gb|EFI00869.1| ABC-type amino acid transport system, permease component yhdX
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|320325828|gb|EFW81889.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327254|gb|EFW83268.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330867829|gb|EGH02538.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330882635|gb|EGH16784.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330988312|gb|EGH86415.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 393

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|159184824|ref|NP_354576.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140109|gb|AAK87361.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 398

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 205/388 (52%), Positives = 269/388 (69%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           +R  S    +YD R+  I  Q++  ++LT      V N   N+++SN+S G GFL  RAG
Sbjct: 11  SRAQSASSLIYDPRIRGIFYQVLTVVILTAFVWVIVTNTITNLQRSNISSGFGFLDGRAG 70

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+I Q ++ YTSDS+Y  A++VG +NT  +AF G+I A+IIG +VG  RLS N L++ + 
Sbjct: 71  FDIGQSLIAYTSDSTYGRALIVGILNTIQVAFFGIIAASIIGFIVGIARLSNNWLISKLA 130

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + YVE+FRNIPPL+VIFF YK V+SVLP    S+ LP G +LNNRG  FP         +
Sbjct: 131 QAYVEIFRNIPPLLVIFFWYKGVISVLPQARDSLELPLGSYLNNRGFFFPKPLWGEGTWL 190

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
              +F++ IV+S F  R ++   E+TG+       +  LI GLP    +AL   L FD P
Sbjct: 191 IPLAFLVAIVISFFVYRWAKARQEQTGQQFRTGITAALLIIGLPAATFLALGSPLTFDYP 250

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           + G+FN  GGS V+PEFMSL++ALS YTA+FIAEIVR G+ AV +GQ EAA ALGL    
Sbjct: 251 IAGRFNLSGGSVVAPEFMSLFLALSFYTASFIAEIVRGGIKAVAKGQTEAADALGLRSST 310

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            TRL+++PQAMR IIPPLTSQ+LNL KNSSLAVAVGFAD+VSVGGTI+NQTGQA+E++ I
Sbjct: 311 TTRLIVVPQAMRIIIPPLTSQFLNLTKNSSLAVAVGFADIVSVGGTILNQTGQAVEVVAI 370

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
           W+ IYLSLS++ AL MN  NAK+AL E+
Sbjct: 371 WLVIYLSLSLLTALVMNWFNAKMALVER 398


>gi|163854808|ref|YP_001629106.1| putative amino acid ABC transporter permease protein [Bordetella
           petrii DSM 12804]
 gi|163258536|emb|CAP40835.1| putative amino acid ABC transporter permease protein [Bordetella
           petrii]
          Length = 396

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 173/397 (43%), Positives = 239/397 (60%), Gaps = 1/397 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M  N  +       R     D  V  +  Q++   L+ +   + V+N  +N++  N+S G
Sbjct: 1   MTTNNPQVPAAAPKRRLSWNDPGVRAVVYQVVALALVALAVWFLVSNTLHNLQVRNISTG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            GF+   AGF I +  + YT  ++Y  AI+VG +NT   A  G+I AT++GTL+G GRLS
Sbjct: 61  FGFIDREAGFAIGETPIDYTPANTYGRAIVVGLLNTLRAAVLGIILATLLGTLIGVGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N L+A +C VYVE  RN+P L+ +FF Y  +   +P P  +     G+F++NRGL  P 
Sbjct: 121 KNWLMAKVCSVYVETMRNVPLLLQLFFWYALITENMPGPRQAANPLPGVFISNRGLKVPA 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L    +    +    L I+ ++ A    +   E TG+  PL  ++  L  GLP L  +  
Sbjct: 181 LEG-ASLDFILGGLALAIIGTIVAAHWGKKRQEATGQVFPLGRVALGLFIGLPILGWLVS 239

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L  D P L  FNF GG T+SPEF +L   L  YT+AFIAE+VRSG+ AV +GQ EAA
Sbjct: 240 GASLKLDMPELKGFNFSGGLTLSPEFAALLAGLVIYTSAFIAEVVRSGIQAVNQGQWEAA 299

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   +  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+G+ D+VSV  T +NQT
Sbjct: 300 GSLGLRRSRVLRLVILPQALRVIIPPMTSQYLNLTKNSSLAVAIGYPDIVSVVNTTMNQT 359

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 360 GQAIEGILIIMAAYLTVSLSISVFMNWYNKRIALVER 396


>gi|330975707|gb|EGH75773.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 393

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 156/380 (41%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLASLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSVLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL K SSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKKSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|330969253|gb|EGH69319.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 393

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 155/380 (40%), Positives = 231/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P          F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGTWAFLISLVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +      TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFGATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|330887728|gb|EGH20389.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 393

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 234/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +  +  +  +N+  N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNIQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   SYA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       F+++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLVFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|325292971|ref|YP_004278835.1| General L-amino acid transport system permease protein aapQ
           [Agrobacterium sp. H13-3]
 gi|325060824|gb|ADY64515.1| General L-amino acid transport system permease protein aapQ
           [Agrobacterium sp. H13-3]
          Length = 398

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 208/388 (53%), Positives = 273/388 (70%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           +R  S    +YD R+  I  Q++  ++LT      V N   N+++SN+S G GFL+ RAG
Sbjct: 11  SRAQSASSLIYDPRIRGIFYQVLTVVILTAFVWIIVTNTITNLQRSNISSGFGFLNGRAG 70

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+I Q ++ YTSD++Y  A+LVG +NT  +AF G+I A+IIG +VG  RLS N L++ + 
Sbjct: 71  FDIGQSLIAYTSDATYGRALLVGILNTIQVAFFGIIAASIIGFIVGIARLSNNWLISKLA 130

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + YVE+FRNIPPL+VIFF YK V+SVLP    S+ LP G +LNNRG  FP         +
Sbjct: 131 QAYVEIFRNIPPLLVIFFWYKGVISVLPQARDSLQLPLGTYLNNRGFFFPKPLWGEGTWL 190

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
              +FV+ IV+S+F  R ++   E+TG+       +T LI GLP    +AL   L FD P
Sbjct: 191 IPLAFVVAIVISVFIYRWAKARQERTGEQFRTGITATLLIIGLPAATFLALGSPLTFDYP 250

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           + G+FN  GGS V+PEFMSL++ALS YTA+FIAEIVR G+ AV +GQ EAA ALGL    
Sbjct: 251 IAGRFNLAGGSVVAPEFMSLFLALSFYTASFIAEIVRGGIKAVAKGQTEAAEALGLRAST 310

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            TRL+++PQAMR IIPPLTSQYLNL KNSSLAVAVGFAD+VSVGGTI+NQTGQA+E++ I
Sbjct: 311 TTRLIVVPQAMRIIIPPLTSQYLNLTKNSSLAVAVGFADIVSVGGTILNQTGQAVEVVAI 370

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
           W+ +YLSLSI+ A+ MN LNAK+AL E+
Sbjct: 371 WLVLYLSLSILTAVVMNWLNAKMALVER 398


>gi|28868467|ref|NP_791086.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851705|gb|AAO54781.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 393

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 154/380 (40%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +     +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       ++++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAVVMMVRWANKRFEATGQPFHKFWVGLALLLSIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I++ MN  N +IAL E+
Sbjct: 374 SISISMLMNWYNKRIALIER 393


>gi|241204487|ref|YP_002975583.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858377|gb|ACS56044.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 400

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 207/400 (51%), Positives = 271/400 (67%), Gaps = 3/400 (0%)

Query: 1   MIKNARKTVT---RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNL 57
           M   A  T       +S    +YD +  +I  Q++  ++L     W  +N   N+ +SN 
Sbjct: 1   MTHEAVDTTPLHGTGWSFRSAMYDPKYRSIFFQVLTIVILVGFVWWVAHNTAVNLARSNT 60

Query: 58  SLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG 117
           + G GFL  RAGFEI Q ++ ++SDS+YA A++VG +NT  +A +G+  ATIIG L+G G
Sbjct: 61  ASGFGFLRGRAGFEIGQSLIGFSSDSTYARALVVGILNTLLVAVTGIFTATIIGFLIGIG 120

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           RLS N L+A +C VYVEVFRNIPPL+VIFF Y  VLSVLP P  S+ LPF M+LNNRGL+
Sbjct: 121 RLSRNWLIAKLCTVYVEVFRNIPPLLVIFFWYLGVLSVLPQPRESVALPFSMYLNNRGLA 180

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           FP    +T       + ++ IV ++   R +      TG+    ++ +  LI GLP LV 
Sbjct: 181 FPKPIFETGMIAVGIALLIAIVATIIIARWAHKRQAATGQPFHTVWTAIALIVGLPLLVF 240

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +   + L FD PV G+FN  GGS V PEFMSL++ALS YTA+FIAEIVR G+  V +GQ 
Sbjct: 241 VVSGFPLTFDVPVAGKFNLTGGSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVAKGQS 300

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALGL     TRLV++PQA+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+
Sbjct: 301 EAAGALGLHPSSVTRLVVVPQALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTIL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQ+GQAIEI+ IW  +YLSLSI+ +LFMN  NAK+AL E+
Sbjct: 361 NQSGQAIEIVCIWGIVYLSLSILTSLFMNWFNAKMALVER 400


>gi|330873114|gb|EGH07263.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330963202|gb|EGH63462.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 393

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 155/380 (40%), Positives = 231/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +     +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       ++++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L  +     +H++ P L  FNF G
Sbjct: 194 IAVVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSTLIFGSPVHWEVPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|213967085|ref|ZP_03395234.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301386369|ref|ZP_07234787.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302133059|ref|ZP_07259049.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213927927|gb|EEB61473.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 393

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 154/380 (40%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  + +     +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       ++++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAVVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I++ MN  N +IAL E+
Sbjct: 374 SISISMLMNWYNKRIALIER 393


>gi|331015251|gb|EGH95307.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 393

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 154/380 (40%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D +V     QII  +++     +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPKVRAWLFQIITVVVVIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+   +YA   ++G +NT  ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YSESDTYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  +       ++++RGL+ P       A  F+ S V+ +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVAV 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG+     ++   L+  +P L ++     +H++ P L  FNF G
Sbjct: 194 IAVVMMVRWANKRFEATGQPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFTG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE +SL +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ+LNL KNSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I++ MN  N +IAL E+
Sbjct: 374 SISISMLMNWYNKRIALIER 393


>gi|323498374|ref|ZP_08103374.1| amino acid ABC transporter, permease protein [Vibrio sinaloensis
           DSM 21326]
 gi|323316616|gb|EGA69627.1| amino acid ABC transporter, permease protein [Vibrio sinaloensis
           DSM 21326]
          Length = 401

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 177/394 (44%), Positives = 244/394 (61%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A KT  R  S    +Y+    ++  Q I    L   F   VNN  +N+E   ++ G GFL
Sbjct: 8   ASKTDNRPSSGASLIYNPTFRSVVFQAIAICALFFFFYTIVNNALSNLEARGIATGFGFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            + AGF I   ++ Y    SY    LVG +NT  ++F G+I AT++G ++G  RLS N L
Sbjct: 68  DQEAGFGIGLTLIEYDETYSYGRTFLVGLLNTALVSFLGIILATVVGFVMGIARLSNNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ +  VY+E+FRN+P L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    +
Sbjct: 128 VSRLAAVYIEIFRNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVFE 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             + + + S VLGIV S+F    +R+    TG+  P+  I   L+  LP +V   +   +
Sbjct: 188 AGSGVVIASLVLGIVASVFVGVWARNKQRLTGQQTPMGRIIFGLVVALPVVVYFVMGSPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SAEYPELKGFNFRGGVSIIPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPKSRTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 368 IEIIAMTMAVYLTLSLVTSALMNIYNRKVALVER 401


>gi|317404417|gb|EFV84834.1| amino acid ABC transporter permease [Achromobacter xylosoxidans
           C54]
          Length = 396

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 175/397 (44%), Positives = 235/397 (59%), Gaps = 1/397 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M  + +        R     D  V  +  Q+I    + +   + V+N  +N+   N++ G
Sbjct: 1   MTTSNKNAPISAPPRRLNWNDPGVRAVVYQVIALAAVALAVWFLVSNTLHNLSVRNIATG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            GFL   AGF I +  + YT   +Y  AI VG +NT  +A  G++ ATI+GTL+G GRLS
Sbjct: 61  FGFLQREAGFAIGETPIAYTPADTYGRAIWVGLLNTLRVAVLGIVLATILGTLIGVGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N LVA I  VYVEV RN+P L+ +FF Y  +   +P P  +     G+F++NRGL  P 
Sbjct: 121 KNWLVAKITSVYVEVMRNVPLLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGLKVPA 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L  + +    +    L IV  LF     +   E TG   PL   +  L+ GLP +  +  
Sbjct: 181 LEGN-SLDWMLAGLGLAIVAILFLGHWGKKRQEATGHVFPLGRAAVGLLIGLPIVGWLVS 239

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L  D P L  FNF GG T+SPEF +L   L  YT+AFIAE+VRSG+ AV  GQ EAA
Sbjct: 240 GASLTLDMPELKGFNFSGGLTLSPEFAALLAGLVIYTSAFIAEVVRSGIQAVNNGQWEAA 299

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL  ++  RLV+LPQA+R IIPP+TSQ+LNL KNSSLAVA+G+ D+VSV  T +NQT
Sbjct: 300 GALGLRRKQVLRLVVLPQALRVIIPPMTSQFLNLTKNSSLAVAIGYPDIVSVVNTTLNQT 359

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 360 GQAIEGILIIMGAYLTVSLSISIFMNWYNKRIALVER 396


>gi|304396996|ref|ZP_07378876.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355792|gb|EFM20159.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 392

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 163/395 (41%), Positives = 237/395 (60%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV R FS      +  V     Q+I  + +  +  + V+N   N++   ++ G GF
Sbjct: 2   SQRPTVKRDFSFG----NPTVRAWIYQLIAVVAVLGVVGYLVHNTIINLDNRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ YT   +YA   LVG  NT  ++   ++ A+I+G  VG  RLS N 
Sbjct: 58  LERTAGFGIVQHLIEYTEGDTYARVFLVGLTNTLLVSALCIVFASILGFAVGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      +++NRGL  P  T 
Sbjct: 118 LLRKLSNIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAYVSNRGLYVPWPTY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              +  FV + +L + +S    R +R    KTG+       +  ++   P L  +     
Sbjct: 178 APGSWPFVIALLLAVAVSYALYRFNRQHQLKTGELRRTWPAAVGMLILFPLLAHLGFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GGS + PE  +L +ALS YT++FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDVPQLRGFNFRGGSVMIPELAALTLALSIYTSSFIAEVIRSGIQSVPHGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  G+++NQTGQ
Sbjct: 298 GLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGSVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S++I++ MN  N KIAL E+
Sbjct: 358 AIETIAITMGVYLIISLLISMLMNFYNRKIALVER 392


>gi|91212700|ref|YP_542686.1| amino acid ABC transporter permease [Escherichia coli UTI89]
 gi|117625558|ref|YP_858881.1| putative amino-acid ABC transporter permease protein yhdX
           [Escherichia coli APEC O1]
 gi|237705972|ref|ZP_04536453.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA]
 gi|91074274|gb|ABE09155.1| hypothetical amino-acid ABC transporter permease protein yhdX
           [Escherichia coli UTI89]
 gi|115514682|gb|ABJ02757.1| putative amino-acid ABC transporter permease protein yhdX
           [Escherichia coli APEC O1]
 gi|226899012|gb|EEH85271.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA]
 gi|315289023|gb|EFU48421.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
          Length = 399

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTHQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|260768537|ref|ZP_05877471.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260616567|gb|EEX41752.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
          Length = 402

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 169/394 (42%), Positives = 235/394 (59%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            +             Y+    ++  Q+I    L   F   +NN   N+E   ++ G  FL
Sbjct: 9   QKTASAAPSKGTSLFYNPTFRSVVFQLIAIAALVFFFYTIINNALTNLESRGIATGFDFL 68

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            + AGF I   ++ Y    SY    +VG +NT  ++  G+I AT+IG ++G  RLS+N L
Sbjct: 69  DQPAGFGIGLTLIDYNETYSYGRTFVVGLLNTALVSVLGIILATMIGFVLGIARLSSNWL 128

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP    +
Sbjct: 129 VSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRESMSLGEAVFLNVRGLFFPAPVFE 188

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             + + + +FV G++ S+     + +    TG+  P+  I   L  GLP +V   +   +
Sbjct: 189 PGSSVVLIAFVAGVIASIVINIWANNKQRLTGQQTPMGRIVLVLCVGLPLIVYFIMGMPI 248

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 249 SAQYPELKGFNFRGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLG 308

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 309 LPRSKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 368

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 369 IEIIAMTMGVYLALSLITSALMNLYNRKVALVER 402


>gi|218691563|ref|YP_002399775.1| amino-acid ABC transporter membrane protein [Escherichia coli ED1a]
 gi|218429127|emb|CAR10070.2| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
          Length = 393

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTHQIKTGQLRRTWPITAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|269964208|ref|ZP_06178499.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269831057|gb|EEZ85225.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 401

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 168/394 (42%), Positives = 242/394 (61%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           +  T+++       +Y+    +   QII    L   F   +NN   N++   ++ G GFL
Sbjct: 8   SPSTMSKPSGSKSLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLDARGIATGFGFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I   ++ Y    SY    +VG +NT  ++  G+I AT+IG ++G  RLS+N L
Sbjct: 68  NQEAGFGIGLTLIEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP   M+
Sbjct: 128 VSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVME 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             + + + + + G++ ++     + +    TG+  P+  I+  L+ GLP +V       +
Sbjct: 188 AGSGLVIAALIFGVIATVLINVWANNKQRLTGQQTPMGRIALGLVVGLPLVVYFLAGMPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SLQYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPRTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 368 IEIIAMTMGVYLTLSLITSALMNLYNRKVALVER 401


>gi|218560338|ref|YP_002393251.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218367107|emb|CAR04881.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|294493510|gb|ADE92266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli IHE3034]
 gi|307625130|gb|ADN69434.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily protein [Escherichia coli UM146]
 gi|323951211|gb|EGB47086.1| inner membrane transport system [Escherichia coli H252]
 gi|323957583|gb|EGB53297.1| inner membrane transport system [Escherichia coli H263]
          Length = 393

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTHQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRRVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|26249861|ref|NP_755901.1| amino-acid ABC transporter permease YhdX [Escherichia coli CFT073]
 gi|227887997|ref|ZP_04005802.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein YhdX [Escherichia coli 83972]
 gi|300991068|ref|ZP_07179489.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301047874|ref|ZP_07194921.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|26110289|gb|AAN82475.1|AE016767_235 Hypothetical amino-acid ABC transporter permease protein yhdX
           [Escherichia coli CFT073]
 gi|227835393|gb|EEJ45859.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein YhdX [Escherichia coli 83972]
 gi|300300217|gb|EFJ56602.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300406989|gb|EFJ90527.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|315294822|gb|EFU54165.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315300934|gb|EFU60154.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
          Length = 399

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTHQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|86357518|ref|YP_469410.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
 gi|86281620|gb|ABC90683.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 406

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 202/385 (52%), Positives = 265/385 (68%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD  V  I  Q++  +LL V   W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPTVRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A++VG +NT  +A +G+I ATIIG +VG GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALVVGLLNTILIAVTGIITATIIGFIVGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP         +   
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGTYLNNRGLSFPKPIFGETFWLVGV 201

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +FV+ I+  +   R +      TG+    ++ S  L+ GLP +  +     L FD P+ G
Sbjct: 202 AFVVAIIAVIATARWAHRRQAATGQPFHTIWASIGLLVGLPLITFLLAGAPLSFDYPIAG 261

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  VP+GQ EAA ALGL     TR
Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV++PQA+R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM 
Sbjct: 322 LVVIPQALRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           IYL LS++ +L MN  NAK+AL E+
Sbjct: 382 IYLGLSVVTSLLMNWFNAKMALVER 406


>gi|300979704|ref|ZP_07174654.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300307922|gb|EFJ62442.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|324009099|gb|EGB78318.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324015879|gb|EGB85098.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 399

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTHQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|307555364|gb|ADN48139.1| amino acid ABC transporter [Escherichia coli ABU 83972]
          Length = 393

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTHQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|110643515|ref|YP_671245.1| amino acid ABC transporter permease [Escherichia coli 536]
 gi|191173839|ref|ZP_03035360.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli F11]
 gi|110345107|gb|ABG71344.1| hypothetical amino-acid ABC transporter permease protein YhdX
           [Escherichia coli 536]
 gi|190905889|gb|EDV65507.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli F11]
          Length = 393

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFLAFILAVVIAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTHQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|327484031|gb|AEA78438.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 401

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 234/396 (59%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++ +   + + + GI+     +  + +    TG+  P+      L    P LV   L  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVAFPVLVYFLLGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|227821879|ref|YP_002825849.1| putative amino-acid ABC transporter membrane protein [Sinorhizobium
           fredii NGR234]
 gi|227340878|gb|ACP25096.1| putative amino-acid ABC transporter membrane protein [Sinorhizobium
           fredii NGR234]
          Length = 397

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 201/397 (50%), Positives = 276/397 (69%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M         R  S    + D +V  I  Q +  ++L V+  W V N   N++++N++ G
Sbjct: 1   MAIGVTNAPERSKSSGSIINDPQVRGIFYQAVTIIILAVLVYWIVQNTVENLQRANIASG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            GFL+ RAGF++ Q ++ +TSDSSY  A++VGFVNT  +A +G+I ATIIG +VG GRLS
Sbjct: 61  YGFLNSRAGFDVGQSLIAFTSDSSYGRALVVGFVNTLLVAVTGIITATIIGFIVGIGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N ++A +   YVEVFRNIPPL+VIFF Y  VL++LP    ++ LP  ++++NRG++FP 
Sbjct: 121 HNWIIAKLSLAYVEVFRNIPPLLVIFFWYSGVLAILPQAREALALPLDIYVSNRGVAFPR 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                 ++  +F+ ++  V S+   R +R   E TG+ LP+L+I   L+ GLP +  +A 
Sbjct: 181 AIFGEGSQYTLFALIIAAVASVVFARYARQRQEATGQRLPVLWIVLGLLIGLPLITFLAT 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L FD P+ G+FN  GGS V PEF+SL++ALS YTAAFIAEIVR+G+  V +GQ EAA
Sbjct: 241 GAPLTFDIPIAGKFNLTGGSVVGPEFISLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+  R  TRLV++PQAMR IIPPLTSQYLNL KNSSLAVAVG+ADLV+VGGTI+NQT
Sbjct: 301 HALGIRPRLTTRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAVGYADLVAVGGTILNQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIE++ IW+ +YLSLS+  +LFMN  NA++AL E+
Sbjct: 361 GQAIEVVSIWIIVYLSLSLATSLFMNWYNARMALVER 397


>gi|27365995|ref|NP_761523.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|320156510|ref|YP_004188889.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O]
 gi|27362195|gb|AAO11050.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus
           CMCP6]
 gi|319931822|gb|ADV86686.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 401

 Score =  319 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 171/390 (43%), Positives = 240/390 (61%), Gaps = 1/390 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
             +  S    LY+    ++  Q+I  L L   F   VNN   N+    ++ G  FLS+ A
Sbjct: 12  SAKPSSSTNLLYNPTFRSVVFQVIAILALVFFFYTIVNNALTNLNARGIATGFDFLSQEA 71

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF I   ++ Y    SY    ++G +NT  ++F G+I AT++G ++G  RLS+N LV+  
Sbjct: 72  GFGIGLTLIEYDETFSYGRTFVIGLLNTALVSFLGIILATVLGFVIGIARLSSNWLVSRF 131

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             +Y+E+FRNIP L+ IFF Y +VL  LP P  SI L   +FLN RGL FP    +  + 
Sbjct: 132 AAIYIEIFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAIFLNVRGLFFPKPVFEAGSA 191

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
               +   GI+ ++F    +R+  + TG+  P+  I+  LI GLP LV       +  + 
Sbjct: 192 FIFAALFAGIIATIFIGVWARNKQKLTGQQTPMGRIALALIVGLPALVYFVSGMPVSAEY 251

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FN+ GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   
Sbjct: 252 PALKGFNYQGGISIIPELAALLVALSIYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRT 311

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
           +  +L+++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII
Sbjct: 312 RTLKLIIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEII 371

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 372 AMTMGVYLTLSLVTSALMNIYNKKVALVER 401


>gi|224367656|ref|YP_002601819.1| AapQ [Desulfobacterium autotrophicum HRM2]
 gi|223690372|gb|ACN13655.1| AapQ [Desulfobacterium autotrophicum HRM2]
          Length = 390

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 164/384 (42%), Positives = 240/384 (62%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            ++ F  D    +I  Q +  + + ++  + V+N   N+E+ ++S G GF    A FEI 
Sbjct: 7   EKIPFFRDPEKLSILYQFLSIVAVGLVSYYLVSNTLANLERQSISTGFGFFEREASFEIG 66

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++ Y++  SY  A+ VGF+NT  ++F G+I   I+GT++G  RLS+N LV+ +  +Y+
Sbjct: 67  ESLIKYSAADSYGRALAVGFLNTLIVSFIGIILTVILGTILGIARLSSNWLVSRLSAIYI 126

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EVF++IP L+ +FF Y     +LP P  ++    G+FL NRGL F         K    +
Sbjct: 127 EVFQDIPILLQLFFWYAFFYEMLPSPRQALNPFSGLFLCNRGLVFGIPEWHPAFKFMAAA 186

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            VLGIV++L   R ++   E+TG+  P+L +S  LI GLP +V +        + P L  
Sbjct: 187 LVLGIVIALVLKRWAKARQERTGQIFPILKVSALLIIGLPLVVWLMTGMPTRMNVPTLQG 246

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++SPEF +L + L  YTAAF+AE+VR+G+ +V +GQ EAA+++GL       L
Sbjct: 247 FNFKGGLSISPEFTALLLGLVLYTAAFVAEVVRAGIQSVSKGQTEAALSIGLKPTHVLNL 306

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA+R IIPPLTSQ LNL KNSSLAVA+G+ D VSV GT INQTGQAIE + + M +
Sbjct: 307 VILPQALRVIIPPLTSQLLNLTKNSSLAVAIGYPDFVSVAGTTINQTGQAIEGVAMIMIV 366

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL  S+  + FMN  N +IAL E+
Sbjct: 367 YLVFSLSTSAFMNWYNKRIALVER 390


>gi|121588010|ref|ZP_01677762.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121547751|gb|EAX57842.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
          Length = 401

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 234/396 (59%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++ +   + + + GI+     +  + +    TG+  P+      L    P LV   L  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|37679740|ref|NP_934349.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37198485|dbj|BAC94320.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 401

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 171/390 (43%), Positives = 240/390 (61%), Gaps = 1/390 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
             +  S    LY+    ++  Q+I  L L   F   VNN   N+    ++ G  FLS+ A
Sbjct: 12  SAKPSSSTNLLYNPTFRSVVFQVIAILALVFFFYTIVNNALTNLNARGIATGFDFLSQEA 71

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF I   ++ Y    SY    ++G +NT  ++F G+I AT++G ++G  RLS+N LV+  
Sbjct: 72  GFGIGLTLIEYDETFSYGRTFVIGLLNTALVSFLGIILATVLGFVIGIARLSSNWLVSRF 131

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             +Y+E+FRNIP L+ IFF Y +VL  LP P  SI L   +FLN RGL FP    +  + 
Sbjct: 132 AAIYIEIFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAIFLNVRGLFFPKPIFEAGSA 191

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
               +   GI+ ++F    +R+  + TG+  P+  I+  LI GLP LV       +  + 
Sbjct: 192 FIFAALFAGIIATIFIGVWARNKQKLTGQQTPMGRIALALIVGLPALVYFVSGMPVSAEY 251

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FN+ GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   
Sbjct: 252 PALKGFNYQGGISIIPELAALLVALSIYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRT 311

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
           +  +L+++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII
Sbjct: 312 RTLKLIIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEII 371

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 372 AMTMGVYLTLSLVTSALMNIYNKKVALVER 401


>gi|327479739|gb|AEA83049.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas stutzeri DSM 4166]
          Length = 394

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 164/384 (42%), Positives = 238/384 (61%), Gaps = 1/384 (0%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           R   L D RV     Q+I  L +     +  +N  NN+    ++ G GFL+  AGF I Q
Sbjct: 11  RRSLLTDPRVRAWVFQVIAVLAVVAFGWYLFHNTQNNLAHRGITSGFGFLNNAAGFGISQ 70

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++ Y+   SY     VG +NT  ++  G++ ATI+G ++G GRLS+N L+  +  +Y+E
Sbjct: 71  HLIDYSESDSYGRVFWVGLLNTLLVSVIGIVLATIMGFILGVGRLSSNWLIRQLATLYIE 130

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +FRNIPPL++IFF+Y +V+S LP P +S+ L   +F+NNRG+  P  +       F  + 
Sbjct: 131 IFRNIPPLLLIFFVYFAVISPLPGPRNSLSLWDAVFVNNRGVQMPAPSAADGFWAFWLAL 190

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++ +V  +   R +R     TG+  P+ + S  L   +P LV +       ++ P L +F
Sbjct: 191 LVALVAVVMLHRWARARRHATGRMFPVFWTSLGLFIAIPWLVTLVAGAPFSWEVPELQRF 250

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N  GG  V PE +S+ +ALS YTAAFI E VRSG+ +V  GQ EAA +LGL   +  RLV
Sbjct: 251 NIRGGWVVIPELVSIVVALSVYTAAFIGETVRSGIQSVSHGQTEAAASLGLRPGQVLRLV 310

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFI 373
           ++PQA+R I+PPLTSQYLNL KNSSLA A+G+ D+VS+  GT++NQTGQAIE + I M +
Sbjct: 311 IVPQALRVIVPPLTSQYLNLAKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETMAITMSV 370

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL++SI I+L MN  N +IAL E+
Sbjct: 371 YLAISISISLLMNWYNKRIALIER 394


>gi|153212715|ref|ZP_01948372.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|229523537|ref|ZP_04412942.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|254225347|ref|ZP_04918959.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|254286187|ref|ZP_04961147.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|262192390|ref|ZP_06050543.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|297578946|ref|ZP_06940874.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|124116365|gb|EAY35185.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|125622188|gb|EAZ50510.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|150423856|gb|EDN15797.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|229337118|gb|EEO02135.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|262031743|gb|EEY50328.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|297536540|gb|EFH75373.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 401

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 234/396 (59%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++ +   + + + GI+     +  + +    TG+  P+      L    P LV   L  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVAFPVLVYFLLGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|218550553|ref|YP_002384344.1| amino-acid ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
 gi|218358094|emb|CAQ90740.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 393

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 157/378 (41%), Positives = 227/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIIQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I L
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFLAFILAVVMAIAL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+       +  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLYRFNKKHQIKTGQLRRTWPFAVGLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTMALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|317049796|ref|YP_004117444.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951413|gb|ADU70888.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 392

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 165/395 (41%), Positives = 233/395 (58%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV R FS      +  V     QI+  + +  +  + ++N   N+    ++ G GF
Sbjct: 2   SQRPTVKRDFSFG----NPTVRAWLYQIVAIVAVFAVVGYLIHNTVINLANRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ YT   +YA   +VG  NT  ++   ++ A+I+G  +G  RLS N 
Sbjct: 58  LERSAGFGIVQHLIDYTEGDTYARVFMVGLTNTLLVSALCIVFASILGFFIGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P  T 
Sbjct: 118 LLRRLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAFVSNRGLYIPWPTY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 FV + +L I  S+   R +R    KTG+      I+  +I   P +        
Sbjct: 178 APGTWPFVIALLLAIAGSVGLFRFNRKHQLKTGQLRRTWPIAAAMIILFPLIAHAMFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            H+D P L  FNF GG  + PE  SL +ALS YT++FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 THWDVPELRGFNFRGGFVMIPELASLTLALSIYTSSFIAEVIRSGIQSVPHGQNEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GLPNPVTMRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 358 AIETIAITMAVYLIISLVISLLMNLYNRKIALVER 392


>gi|153828789|ref|ZP_01981456.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|148875742|gb|EDL73877.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
          Length = 401

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 234/396 (59%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLSVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++ +   + + + GI+     +  + +    TG+  P+      L    P LV   L  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVAFPVLVYFLLGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|218706884|ref|YP_002414403.1| amino-acid ABC transporter membrane protein [Escherichia coli
           UMN026]
 gi|293406871|ref|ZP_06650797.1| polar amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|298382612|ref|ZP_06992209.1| general L-amino acid transport system permease [Escherichia coli
           FVEC1302]
 gi|218433981|emb|CAR14898.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|291426877|gb|EFE99909.1| polar amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|298277752|gb|EFI19268.1| general L-amino acid transport system permease [Escherichia coli
           FVEC1302]
          Length = 393

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVIGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|163800831|ref|ZP_02194731.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175180|gb|EDP59977.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 401

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 174/396 (43%), Positives = 240/396 (60%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
             +  T+++       LY+    +   Q I    L   F   VNN  +N+E   ++ G G
Sbjct: 6   NTSPSTMSKPRRSENLLYNPAFRSAFFQFIAVAALVFFFYTIVNNALSNLEARGIATGFG 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL++ AGF I   ++ Y    SY    +VG +NT  +A  G+I ATIIG ++G  RLS+N
Sbjct: 66  FLNQEAGFGIGLTLIEYDETFSYGRTFIVGLLNTALVAVLGIILATIIGFIMGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            LV+ +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ +   +FLN RGL FP   
Sbjct: 126 WLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSIGEAVFLNVRGLYFPAPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +  + + + +F+ GIV S      +R+    TG+  P++ I   L+  LP  V      
Sbjct: 186 WEAGSSVVIAAFIFGIVASFLIYIWARNKQRLTGQQTPMVRIVFGLVIVLPLAVYFIAGM 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +    P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PISLQYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLPRTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIIAMTMGVYLALSLITSALMNLYNRKVALVER 401


>gi|15641373|ref|NP_231005.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121728524|ref|ZP_01681547.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147675096|ref|YP_001216920.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153819351|ref|ZP_01972018.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|227081532|ref|YP_002810083.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505058|ref|ZP_04394568.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229511272|ref|ZP_04400751.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229518390|ref|ZP_04407834.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229608062|ref|YP_002878710.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254848483|ref|ZP_05237833.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255745748|ref|ZP_05419696.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262158974|ref|ZP_06030086.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262169333|ref|ZP_06037025.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|298498555|ref|ZP_07008362.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9655854|gb|AAF94519.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121629188|gb|EAX61628.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|126510096|gb|EAZ72690.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|146316979|gb|ABQ21518.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227009420|gb|ACP05632.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227013278|gb|ACP09488.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229345105|gb|EEO10079.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229351237|gb|EEO16178.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229357281|gb|EEO22198.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229370717|gb|ACQ61140.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254844188|gb|EET22602.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255736823|gb|EET92220.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262022146|gb|EEY40855.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|262029159|gb|EEY47811.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|297542888|gb|EFH78938.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 401

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 234/396 (59%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLEQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++ +   + + + GI+     +  + +    TG+  P+      L    P LV   L  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|153825266|ref|ZP_01977933.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|183179359|ref|ZP_02957570.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|229515733|ref|ZP_04405192.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229529563|ref|ZP_04418953.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|149741094|gb|EDM55153.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|183012770|gb|EDT88070.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|229333337|gb|EEN98823.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229347502|gb|EEO12462.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
          Length = 401

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 234/396 (59%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVMFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++ +   + + + GI+     +  + +    TG+  P+      L    P LV   L  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVAFPVLVYFLLGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|237807992|ref|YP_002892432.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500253|gb|ACQ92846.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 397

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 170/383 (44%), Positives = 243/383 (63%), Gaps = 1/383 (0%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
            +++YD +V  I  Q I    +  +  + ++N  +NME   ++ G  FL  RA F I Q 
Sbjct: 15  TRWIYDPKVRGIIFQSIAVACVAWMLFYFISNALHNMESRGIATGFSFLDNRASFGIAQS 74

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y+ + +Y  A ++G +NT  ++  G+I AT+ G L+G  RLS N L++    VY+E 
Sbjct: 75  LISYSENDTYGRAFIIGLLNTLLVSGIGIIFATVFGFLIGIARLSNNWLLSRAAAVYIET 134

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRNIP L+ IFF Y  VL  LP P  SI L    FLN RGL  P    ++       +F+
Sbjct: 135 FRNIPLLLQIFFWYFCVLRALPGPRDSINLLDAFFLNVRGLYVPAPVTESGFTAVTVAFI 194

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L IV  +F  + +++    TG+  P+ + S  L+FGLP +V +     +H++ P L  FN
Sbjct: 195 LAIVACVFLKKWAKNRQNLTGQPFPVFFSSLGLLFGLPLVVFLIAGMPMHWELPALKGFN 254

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG TV PE  S+ +AL+ +TAA IAEIVRSG++AV +GQ+EAA ALGL +    R ++
Sbjct: 255 FRGGLTVIPELFSMVVALTIFTAASIAEIVRSGIMAVSKGQVEAADALGLKNGLTLRFII 314

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           +PQAMR IIPPLTSQYLNL+KNSSLA AVG+ DLVSV  G+ +NQTGQA+EII + M +Y
Sbjct: 315 IPQAMRVIIPPLTSQYLNLVKNSSLATAVGYPDLVSVFMGSTLNQTGQAVEIIAMTMAVY 374

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L++S++ ++ MN  NAK AL E+
Sbjct: 375 LTISLITSVLMNIYNAKKALVER 397


>gi|33598478|ref|NP_886121.1| putative amino acid ABC transporter permease protein [Bordetella
           parapertussis 12822]
 gi|33574607|emb|CAE39257.1| putative amino acid ABC transporter permease protein [Bordetella
           parapertussis]
          Length = 396

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 167/397 (42%), Positives = 237/397 (59%), Gaps = 1/397 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M    R        R     D  +  +  Q +  +++ ++  + V+N  +N+   N++ G
Sbjct: 1   MTTTNRNAPIPAPRRRLNWNDPGLRAVVYQFVALVVVALVAWFLVSNTLHNLSVRNIATG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            GFL   AGF I +  + Y+   +Y  AILVG +NT  +A  G++ AT++GTL+G GRLS
Sbjct: 61  FGFLDREAGFAIGETPIAYSPSDTYGRAILVGVLNTLRVAVIGIVLATLLGTLIGIGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N LV  +  +YVEV RN+P L+ +FF Y  +   +P P  +     G+F++NRG+  P+
Sbjct: 121 KNWLVTRLTSIYVEVMRNVPLLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGVRVPS 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L  +      +    L IV  +      R   E TG+  PL   +  L+ GLP +  +A 
Sbjct: 181 LEGNA-LDWMLGGLALAIVAIIVLGHWGRKRQEATGRIFPLGRAAIALLIGLPIVGWLAS 239

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L  D P L  FNF GG  +SPEF +L   L+ YT+AF+AE+VRSG+ AV +GQ EAA
Sbjct: 240 GASLALDMPALKGFNFQGGLNMSPEFAALLAGLAIYTSAFVAEVVRSGIQAVNQGQWEAA 299

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   +  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+G+ D+VSV  T +NQT
Sbjct: 300 GSLGLRRAQVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVAIGYPDIVSVVNTTLNQT 359

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 360 GQAIEGILIIMGAYLTVSLTISIFMNWYNKRIALVER 396


>gi|308188312|ref|YP_003932443.1| amino-acid ABC transporter permease protein yhdX [Pantoea vagans
           C9-1]
 gi|308058822|gb|ADO10994.1| Putative amino-acid ABC transporter permease protein yhdX [Pantoea
           vagans C9-1]
          Length = 392

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 164/395 (41%), Positives = 234/395 (59%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV R FS      +  V     Q I  + +  +  + V+N   N+    ++ G GF
Sbjct: 2   SQRPTVKRDFSFG----NPTVRAWIYQFIAIVAVLGVVGYLVHNTIINLANRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ YT   +YA   LVG  NT  ++   ++ A+I+G  VG  RLS N 
Sbjct: 58  LERTAGFGIVQHLIEYTEGDTYARVFLVGLTNTLLVSALCIVFASILGFAVGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      +++NRGL  P  T 
Sbjct: 118 LLRKLSNIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAYVSNRGLYVPWPTY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              +  FV + +L + +S    R +R    KTG+       +  ++   P L  +     
Sbjct: 178 APGSWPFVIALLLAVAVSYGLYRFNRQHQLKTGELRRTWPAAAAMLILFPLLAHLGFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            H+D P L  FNF GGS + PE  +L +ALS YT++FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 THWDVPQLRGFNFRGGSVMIPELAALTLALSIYTSSFIAEVIRSGIQSVPHGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  G+++NQTGQ
Sbjct: 298 GLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGSVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 358 AIETIAITMGVYLIISLLISLLMNFYNRKIALVER 392


>gi|33594684|ref|NP_882328.1| putative amino acid ABC transporter permease protein [Bordetella
           pertussis Tohama I]
 gi|33603421|ref|NP_890981.1| putative amino acid ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
 gi|33564760|emb|CAE44085.1| putative amino acid ABC transporter permease protein [Bordetella
           pertussis Tohama I]
 gi|33577545|emb|CAE34810.1| putative amino acid ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
          Length = 396

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 168/397 (42%), Positives = 237/397 (59%), Gaps = 1/397 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M    R        R     D  +  +  Q +  +++ ++  + V+N  +N+   N++ G
Sbjct: 1   MTTTNRNAPIPAPRRRLNWNDPGLRAVVYQFVALVVVALVAWFLVSNTLHNLSVRNIATG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            GFL   AGF I +  + Y+   +Y  AILVG +NT  +A  G++ AT++GTL+G GRLS
Sbjct: 61  FGFLDREAGFAIGETPIAYSPSDTYGRAILVGVLNTLRVAVIGIVLATLLGTLIGIGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N LVA +  +YVEV RN+P L+ +FF Y  +   +P P  +     G+F++NRG+  P+
Sbjct: 121 KNWLVARLTSIYVEVMRNVPLLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGVRVPS 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L  +      +    L IV  +      R   E TG+  PL   +  L+ GLP +  +A 
Sbjct: 181 LEGNA-LDWMLGGLALAIVAIIVLGHWGRKRQEATGRIFPLGRAAIALLIGLPIVGWLAS 239

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L  D P L  FNF GG  +SPEF +L   L  YT+AF+AE+VRSG+ AV +GQ EAA
Sbjct: 240 GASLALDMPALKGFNFQGGLNMSPEFAALLAGLVIYTSAFVAEVVRSGIQAVNQGQWEAA 299

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   +  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+G+ D+VSV  T +NQT
Sbjct: 300 GSLGLRRAQVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVAIGYPDIVSVVNTTLNQT 359

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 360 GQAIEGILIIMGAYLTVSLTISIFMNWYNKRIALVER 396


>gi|229521467|ref|ZP_04410886.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229341565|gb|EEO06568.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
          Length = 401

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 234/396 (59%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYAIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLDQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMNLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++ +   + + + GI+     +  + +    TG+  P+      L    P LV   L  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVAFPVLVYFLLGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGLT  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLTLSLLTSALMNLYNRKVALVER 401


>gi|215488576|ref|YP_002331007.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312968400|ref|ZP_07782609.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 2362-75]
 gi|215266648|emb|CAS11087.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|312286618|gb|EFR14529.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 2362-75]
 gi|320194755|gb|EFW69385.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli WV_060327]
          Length = 393

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 158/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+       +  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|325498847|gb|EGC96706.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ECD227]
          Length = 393

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 157/378 (41%), Positives = 227/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRVWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIIQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I L
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFLAFILAVVMAIAL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+       +  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLYRFNKKHQIKTGQLRRTWPFAVGLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTMALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|104783491|ref|YP_609989.1| general amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95112478|emb|CAK17205.1| general amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 392

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 160/380 (42%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N+E   ++ G  FL   AGF I Q ++P
Sbjct: 13  LSDPRVRAWLFQILTVVFVAGLGWYLFHNTQTNLEHRGITSGFDFLERSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G++ AT++G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGIVLATLLGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  ++      FV +  L I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIQDTFFISNRGLNMPGASLAEGFWPFVVALGLAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +   R +    ++TG+     ++   L  G+P +  +     +H++ P L  FNF+G
Sbjct: 193 VAIVLMVRHANKRFDETGEPFHKFWVGLLLFIGIPGVCALLFGSPVHWEVPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|330909320|gb|EGH37834.1| glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli AA86]
          Length = 393

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 158/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  +    I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+       +  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLHRTWPFAAVLIIGLPLLTQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|312959111|ref|ZP_07773630.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311286881|gb|EFQ65443.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 393

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 163/380 (42%), Positives = 228/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             D +V     QII  + +  +  +  NN   N++   ++ G  FL   AGF I Q ++ 
Sbjct: 14  FSDPKVRAWLFQIITIVAVVSLGWYLFNNTQTNLQHRGITSGFDFLERSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   SYA   ++G +NT  + F G+I AT++G +VG  RLS N ++  +  VYVEVFRN
Sbjct: 74  YTESDSYARVFVIGLLNTLLVTFIGVILATLLGFIVGVARLSPNWMINKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   +P P +S       F+++RGL+ P          FV S V+ I
Sbjct: 134 IPPLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAMAADGFWPFVASIVVAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +  TR +    E TG      +    L   +P L  +     LH++ P L  FNF+G
Sbjct: 194 VAIVLMTRWANKRFEATGVPFHKFWAGLALFIVIPALCALIFGVPLHWEMPKLQGFNFVG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL +    R V++PQ
Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|331649070|ref|ZP_08350158.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli M605]
 gi|331042817|gb|EGI14959.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli M605]
          Length = 399

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 158/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  +    I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+       +  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLHRTWPFAAVLIIGLPLLTQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|261210914|ref|ZP_05925204.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260839889|gb|EEX66489.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 433

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 165/396 (41%), Positives = 229/396 (57%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
             A      +      LY+    + + Q I    L       VNN   N+E   ++ G  
Sbjct: 38  NAASSLSDAHSKHTNLLYNPTFRSAAFQFIAVCALVFFLYTIVNNALTNLESRGIATGFA 97

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q +V Y    SY    +VG +NT  ++  G+I AT++G ++G  RLS+N
Sbjct: 98  FLDQPAGFGISQSLVEYDETYSYGRTFIVGLLNTALVSLLGIILATLLGFVLGIARLSSN 157

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ +   ++LN +GL      
Sbjct: 158 WLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHVGEWLYLNVKGLYLVKPI 217

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +T++     + + G       +  +R+    TG+  P+   +  L    P LV   L  
Sbjct: 218 FETSSMWVFVALLAGAAACWVLSIWARNRQRLTGQQTPMGRYAILLCVAFPVLVYYLLGQ 277

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 278 PITAEYPVLRGFNFQGGITVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 337

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 338 LGLPRSKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 397

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 398 QAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 433


>gi|319778956|ref|YP_004129869.1| Glutamate Aspartate transport system permease protein GltJ
           [Taylorella equigenitalis MCE9]
 gi|317108980|gb|ADU91726.1| Glutamate Aspartate transport system permease protein GltJ
           [Taylorella equigenitalis MCE9]
          Length = 385

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 158/379 (41%), Positives = 241/379 (63%), Gaps = 1/379 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             D R   I  QI++  L+     + ++N+ +N+   N+  G  F+ + AGF I + ++ 
Sbjct: 8   WDDERFRAIVYQILVLALVVAGIWFLISNLLDNLHSRNIQTGFAFIDKEAGFAISESLIE 67

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y  A+ VGF+NT +++F G+I  TI+GTLVG GRLS N LV+ +  VYVEV RN
Sbjct: 68  YKLTDTYLRALAVGFLNTLFVSFLGIIGCTILGTLVGIGRLSHNWLVSKLSLVYVEVMRN 127

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP L+ +FF Y  +  +LP P  ++    G++L+NRG+ FP L  D    I++ + V  +
Sbjct: 128 IPLLIHLFFWYSLLTEILPGPRQALNPVEGVYLSNRGIMFPKLEGDGVIYIWI-ALVAAL 186

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VLS+  +   +  H K+GK  P+ + +T +I GLP LV +    Q+    P L  FNF G
Sbjct: 187 VLSILNSYRCKLKHAKSGKCSPVFWTNTLMIIGLPILVGLIFNSQIGLSVPELKGFNFRG 246

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS  +PE  +L I L  YT+AF+AEIVRSG+ +V +GQ EA  +LGL+  +  +LV++PQ
Sbjct: 247 GSLFTPEMSALLIGLVLYTSAFVAEIVRSGIQSVGKGQWEAGESLGLSKMRTLQLVVMPQ 306

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R +IP +++ Y+NL+KNSSLAVA+G+ D+VS+  T++ QTGQAIE I + M  YL++S
Sbjct: 307 AIRVMIPSMSNTYMNLMKNSSLAVAIGYPDIVSISNTMLTQTGQAIEAIFVIMMAYLTVS 366

Query: 379 IMIALFMNRLNAKIALKEK 397
           + IA FM  LN ++ + E+
Sbjct: 367 LCIAQFMAWLNRRMVIVER 385


>gi|146308574|ref|YP_001189039.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145576775|gb|ABP86307.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 394

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 169/391 (43%), Positives = 235/391 (60%), Gaps = 1/391 (0%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
           T      R     D +V     QI+  + +  +  +   N   N+EK  +  G GFLS  
Sbjct: 4   TANAPRPRGSVWTDPQVRAWLFQILAVIAVVALGWFLFQNTQTNLEKRGIVSGFGFLSNS 63

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF I Q ++ Y+   SY    ++G +NT  ++F G++ A+I+G ++G  RLS N L++ 
Sbjct: 64  AGFGIAQHLIDYSESDSYGRVFVIGLLNTLLVSFIGIVLASILGFILGVARLSPNWLISK 123

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  VY+E+FRNIPPL+ I F Y +V   LP P  S+ +    FLN+RGL  P      + 
Sbjct: 124 LATVYIEIFRNIPPLLQILFWYFAVFLALPGPRQSLDIGETFFLNSRGLYMPAPGPSESF 183

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            +F    +  IV  +   R ++   E TGK  PLL+ S  LI  +P L ++     L + 
Sbjct: 184 GLFAVVLLATIVGIIALGRWAKKRREATGKIFPLLWTSLALIVVIPGLTVLIGGNPLVWS 243

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L  FNF GG  + PE M+L +AL+ YTAAFIAE VRSG++AV  GQ EAA +LGL  
Sbjct: 244 VPELRGFNFRGGWVMIPELMALTLALTIYTAAFIAENVRSGIMAVSHGQTEAARSLGLRP 303

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEI 366
               RLV++PQA+R IIPPLTSQYLNL KNSSLA  +G+ D+VS+  GT++NQTGQAIE+
Sbjct: 304 GITLRLVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIGYPDMVSLFAGTVLNQTGQAIEV 363

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I I M +YL++SI I+L MN  N +IAL E+
Sbjct: 364 IAITMSVYLAISISISLLMNWYNKRIALIER 394


>gi|254230450|ref|ZP_04923828.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262394187|ref|YP_003286041.1| amino acid ABC transporter permease [Vibrio sp. Ex25]
 gi|151937021|gb|EDN55901.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262337781|gb|ACY51576.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 401

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 170/394 (43%), Positives = 242/394 (61%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           +  T+++       +Y+    +   QII    L   F   +NN  NN++   ++ G GFL
Sbjct: 8   SPSTMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIINNALNNLDARGIATGFGFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I   ++ Y    SY    ++G +NT  ++  G+I AT+IG  +G  RLS+N L
Sbjct: 68  NQEAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIGFTMGVARLSSNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP   M+
Sbjct: 128 VSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSLSLGEAIFLNVRGLYFPAPEME 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             +   + + + G++ SL     + +    TG+  P+  I+  L+ GLP +V       +
Sbjct: 188 PGSGFVIAALIFGVIASLLINVWANNKQRLTGQQTPMGRIALGLVVGLPLIVYFLAGMPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SLNYPELKGFNFQGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPRAKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 368 IEIIAMTMGVYLTLSLITSALMNLYNRKVALVER 401


>gi|242241100|ref|YP_002989281.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133157|gb|ACS87459.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 392

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 162/394 (41%), Positives = 236/394 (59%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QIIL + +     + V+N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKSDLS----LTNPAVRAWLYQIILVIAVLAFAGYLVSNTVTNLAQRGITSGFAFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +  AGF I Q ++ Y    +YA   +VG +NT  ++   ++ A+++G +VG  RLS N L
Sbjct: 59  NNSAGFGIIQHLIDYQQGDTYARVFVVGLLNTLLVSAICIVCASLLGFVVGLARLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  +   Y+E FRNIPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  + 
Sbjct: 119 LRKLSTFYIETFRNIPPLLQIFFWYFAVLRNLPGPRQAVNALDTFFLSNRGLYIPSAELG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + A   V S V  +++++  +R S+ +   TG+      I   ++  L  L  +     L
Sbjct: 179 SGALSAVLSLVATLMVAILISRRSKRYQALTGQQRKTWPIPLTMLIVLMGLSHLVFGPAL 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H+D P L  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA++LG
Sbjct: 239 HWDVPELKGFNFRGGMVLIPELAALALALSIYTSSFIAEIIRSGIQSVSHGQHEAALSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L      + V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPKSVTLKKVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLVMNVYNRKIALIER 392


>gi|331659558|ref|ZP_08360500.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA206]
 gi|331054140|gb|EGI26169.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA206]
          Length = 393

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 231/378 (61%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI++ + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILVVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++     +FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPSPQLGDRFLAFILAVVIAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++    KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTHQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|91227964|ref|ZP_01262074.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269968794|ref|ZP_06182783.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|91188285|gb|EAS74583.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269826606|gb|EEZ80951.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 401

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 172/394 (43%), Positives = 242/394 (61%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           +  T+++       +Y+    +   QII    L   F   VNN  NN++   ++ G GFL
Sbjct: 8   SPSTMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIVNNALNNLDARGIATGFGFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I   ++ Y    SY    ++G +NT  ++  G+I AT+IG  +G  RLS+N L
Sbjct: 68  NQEAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIGFTMGVARLSSNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP  TM+
Sbjct: 128 VSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSLSLGEAIFLNVRGLYFPAPTME 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             +   + + + G++ SL     + +    TG+  P+  I   L+ GLP +V       +
Sbjct: 188 PGSSYVIAALIFGVIASLLINVWANNKQRLTGQQTPMGRIVLGLVVGLPLVVYFLAGMPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SLNYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPRSKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 368 IEIIAMTMGVYLTLSLITSALMNLYNRKVALVER 401


>gi|296104984|ref|YP_003615130.1| general L-amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059443|gb|ADF64181.1| general L-amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 393

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 163/377 (43%), Positives = 228/377 (60%), Gaps = 1/377 (0%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
             V     QII  L + +I ++ ++N   N+    ++ G  FL   AGF I Q ++ Y  
Sbjct: 17  PAVRAWLFQIIAILAVVLIAIYLIHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQE 76

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    LVG +NT  ++   ++ A+I+G  +G  RLS N L+  +  +Y+E FRNIPP
Sbjct: 77  GDTYGRVFLVGLLNTLLVSALCIVFASILGFFIGLARLSDNWLLRKLSTIYIETFRNIPP 136

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + ++ + LS
Sbjct: 137 LLQIFFWYFAVLRNLPGPRQAVDAFDLFFLSNRGLYIPSPELAEGIYAFIAAIIIALALS 196

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
               R +R    KTG+      I+  LI GLP L        LH+D P L  FNF GG  
Sbjct: 197 AGLFRYNRKHQIKTGQLRKTWPIAALLIIGLPLLTHWLFGAALHWDVPHLRGFNFQGGMV 256

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL H    R V++PQA+R
Sbjct: 257 LIPELAALTLALSIYTSAFIAEIIRAGIQAVPHGQHEAARSLGLPHTVTLRQVIIPQALR 316

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ 
Sbjct: 317 VIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLA 376

Query: 381 IALFMNRLNAKIALKEK 397
           I+L MN  N +IAL E+
Sbjct: 377 ISLLMNLYNRRIALVER 393


>gi|288958132|ref|YP_003448473.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288910440|dbj|BAI71929.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 399

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 164/399 (41%), Positives = 233/399 (58%), Gaps = 2/399 (0%)

Query: 1   MIKNARKT--VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M    R T            L D     I  QI++   + ++  + ++N  +N+ + +++
Sbjct: 1   MATETRTTQGAPPPGGVSFSLSDPTFRAIVYQILVVGAVVLVGWFLISNTLDNLARRSIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G  FL   A F I + ++ Y+   SY  A LVG +NT  ++  G++ AT+IGT++G  R
Sbjct: 61  TGYHFLEREAAFGIGESLIDYSPKDSYGRAFLVGVLNTLKVSIIGVVLATVIGTIIGVAR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS+N L+A +   YVE+ RNIPPL+ +FF Y  V   LP    ++    G+FL+ RGL  
Sbjct: 121 LSSNWLIARLASTYVEIIRNIPPLLQLFFWYALVSDGLPPVRQALNPLPGVFLSQRGLRV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    D        +F++GI  +   +R ++    +TG+  P  +    LI GLP L  +
Sbjct: 181 PVPAADPVWSSMGIAFLVGIAAAWGVSRWAKARQARTGQRFPAGWAGLGLIIGLPILAWL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A       D P L  FNF GG  +SPEF ++   L+ YTAAFIAE+VRSG+ AV  GQ E
Sbjct: 241 AGGAPTALDMPTLAGFNFSGGLAISPEFFAILTGLTLYTAAFIAEVVRSGIKAVNWGQTE 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL      RLV+LPQA+R I+PPLTSQYLNL KNSSLA+A+G+ DLVS+  T +N
Sbjct: 301 AARALGLPSGPTLRLVILPQALRVIVPPLTSQYLNLTKNSSLALAIGYPDLVSIANTTLN 360

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QTGQAIE + + M  YL +S+ I++FMN  N +IAL E+
Sbjct: 361 QTGQAIEGVTMIMGTYLVISLSISIFMNWYNKRIALVER 399


>gi|327395462|dbj|BAK12884.1| amino acid ABC transporter permease protein YhdX [Pantoea ananatis
           AJ13355]
          Length = 392

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 165/395 (41%), Positives = 238/395 (60%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV R FS      +  V     QI+  +++  +  + ++N   N+    ++ G GF
Sbjct: 2   SQRPTVKRDFSFG----NPTVRAWLYQIVAIIIVVAVVGYLIHNTVINLANRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ YT   +YA   LVG  NT  ++   ++ A+++G  +G  RLS N 
Sbjct: 58  LERNAGFGIVQHLIDYTEGDTYARVFLVGLTNTLLVSALCIVFASVLGFFIGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  I  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P  T 
Sbjct: 118 LLRKIANIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAFVSNRGLYVPWPTY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              +  FVF+ VL +V S    R +R    KTG+      ++  ++   P +  +     
Sbjct: 178 APGSWPFVFALVLAVVASYALFRFNRQHQLKTGQFRRTWPVAILMLLLFPFIAHLGFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT++FIAE++RSG+ AVP GQ EAA +L
Sbjct: 238 MHWDIPELRGFNFRGGFVMIPELAALTLALSIYTSSFIAEVIRSGIQAVPYGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S++I++ MN  N KIAL E+
Sbjct: 358 AIETIAITMSVYLIISLLISMLMNFYNRKIALVER 392


>gi|293602098|ref|ZP_06684551.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
 gi|292819500|gb|EFF78528.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
          Length = 404

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 175/397 (44%), Positives = 237/397 (59%), Gaps = 1/397 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M  + +        R     D  V ++  Q++    +     + V+N  +N+   N++ G
Sbjct: 9   MTTSNKNAPISAPRRRLNWNDPGVRSVVYQVLALAAVAWAVWFLVSNTLHNLSVRNIATG 68

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            GFLS  AGF I +  + Y+  + Y  AILVG +NT  +A  G++ ATI+GTL+G GRLS
Sbjct: 69  FGFLSREAGFAIGETPIAYSPANDYGRAILVGLLNTLRVAVIGIVLATILGTLIGIGRLS 128

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N LVA I  VYVEV RN+P L+ +FF Y  +   +P P  +     G+F++NRGL  P 
Sbjct: 129 KNWLVAKITSVYVEVMRNVPLLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGLKVPG 188

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L  + +    +    L IV  ++     +  HE TG   PL   +  L+ GLP +  +  
Sbjct: 189 LEGN-SLDWMLAGLGLAIVAIIYLGHYGKKRHEATGHMFPLGRWAIALLIGLPFVGWLVS 247

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L  D P L  FNF GG T+SPEF +L   L  YT+AFIAE+VRSG+ AV  GQ EAA
Sbjct: 248 GASLTLDMPELKGFNFSGGLTLSPEFAALLAGLVIYTSAFIAEVVRSGIQAVNNGQWEAA 307

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   K  RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+G+ D+VSV  T +NQT
Sbjct: 308 GSLGLPRAKVLRLVILPQALRVIIPPMTSQYLNLTKNSSLAVAIGYPDIVSVVNTTLNQT 367

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 368 GQAIEGILIIMGAYLTVSLSISIFMNWYNKRIALVER 404


>gi|281180311|dbj|BAI56641.1| amino acid ABC transporter permease component [Escherichia coli
           SE15]
          Length = 399

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 158/378 (41%), Positives = 228/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  +    I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAAVSIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRIFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+       +  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|209549161|ref|YP_002281078.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209534917|gb|ACI54852.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 400

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 206/388 (53%), Positives = 268/388 (69%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
              ++    +YD +  +I  QI+  ++L     W  +N   N+ +SN + G GFL  RAG
Sbjct: 13  DTGWTFRSAMYDPKYRSIFFQILTIVVLVAFVWWVAHNTAVNLARSNTASGFGFLRGRAG 72

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           FEI Q ++ Y+SDS+YA A+ VG +NT  +A +G++ ATIIG ++G GRLS N L+A + 
Sbjct: 73  FEIGQSLIGYSSDSTYARALFVGILNTLLVAVTGIVTATIIGFIIGIGRLSRNWLIAKLS 132

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            VYVE+FRNIPPL+VIFF Y  VLSVLP P  S+ LPF MFLNNRGL+FP    +T    
Sbjct: 133 TVYVEIFRNIPPLLVIFFWYLGVLSVLPQPRESVGLPFSMFLNNRGLAFPKPIFETGMVA 192

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
              + ++ IV ++   R +      TG+    ++ S  LI GLP LV +A  + L FD P
Sbjct: 193 VGIALLIAIVAAIIMARWAHKRQAATGQPFHTVWASIALIVGLPLLVFVASGFPLTFDVP 252

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V G+FN  GGS V PEFMSL++ALS YTA+FIAEIVR G+  VP+GQ EAA ALGL    
Sbjct: 253 VAGKFNLTGGSVVGPEFMSLFLALSFYTASFIAEIVRGGIRGVPKGQSEAAGALGLHPSN 312

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            TRLV++PQA+R IIPPLTSQYLNL KNSSLA+A+GF+DLV+VGGTI+NQ+GQAIEI+ I
Sbjct: 313 VTRLVVVPQALRIIIPPLTSQYLNLTKNSSLAIAIGFSDLVAVGGTILNQSGQAIEIVCI 372

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
           W   YLSLSI+ +LFMN  NAK+AL E+
Sbjct: 373 WGIAYLSLSILTSLFMNWFNAKMALVER 400


>gi|291619132|ref|YP_003521874.1| YhdX [Pantoea ananatis LMG 20103]
 gi|291154162|gb|ADD78746.1| YhdX [Pantoea ananatis LMG 20103]
          Length = 392

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 164/395 (41%), Positives = 237/395 (60%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV R FS      +  V     QI+  +++  +  + ++N   N+    ++ G GF
Sbjct: 2   SQRPTVKRDFSFG----NPTVRAWLYQIVAIIIVVAVVGYLIHNTVINLANRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ YT   +YA   LVG  NT  ++   ++ A+++G  +G  RLS N 
Sbjct: 58  LERNAGFGIVQHLIDYTEGDTYARVFLVGLTNTLLVSALCIVFASVLGFFIGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  I  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P  T 
Sbjct: 118 LLRKIANIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAFVSNRGLYVPWPTY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              +  FV + VL +V S    R +R    KTG+      ++  ++   P +  +     
Sbjct: 178 APGSWPFVIALVLAVVASYALFRFNRQHQLKTGQFRRTWPVAILMLLLFPFIAHLGFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT++FIAE++RSG+ AVP GQ EAA +L
Sbjct: 238 MHWDIPELRGFNFRGGFVMIPELAALTLALSIYTSSFIAEVIRSGIQAVPYGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S++I++ MN  N KIAL E+
Sbjct: 358 AIETIAITMSVYLIISLLISMLMNFYNRKIALVER 392


>gi|90410649|ref|ZP_01218665.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90328890|gb|EAS45174.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 403

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 170/390 (43%), Positives = 233/390 (59%), Gaps = 1/390 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           V     +    Y+     I  Q+I  L L   F   +NN   N++   ++ G GFL++ A
Sbjct: 14  VASPPKKQNLFYNPTFRAIVFQLIAVLGLLFFFYNIINNALENLDARGIATGFGFLNQEA 73

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF I   ++ Y    +Y     VG +NT  ++  G+  ATIIG  VG  RLS+N L++  
Sbjct: 74  GFGIGLTLIDYDETYTYGRTFFVGLLNTALVSVLGIFLATIIGFTVGIARLSSNWLISRF 133

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             +Y+E FRNIP L+ IFF Y +VL  LP P  S+ +   +F+N RGL       +  + 
Sbjct: 134 AALYIETFRNIPLLLQIFFWYFAVLQALPSPRQSLSIGESLFINVRGLYLAGPVFNEGSG 193

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
               +F L +VLS+     S    + TG+  P+L  +  ++ GLP +   A    +  + 
Sbjct: 194 WIFAAFALAVVLSIIYAIRSHKKQQDTGEQSPILLTTIGMVIGLPLIAFFAAGMPISVEY 253

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EA++ALGL   
Sbjct: 254 PELKGFNFRGGISILPELAALLVALSIYTASFIAEIVRSGINAVNHGQTEASLALGLPRS 313

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
           K  RLV++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII
Sbjct: 314 KTLRLVVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEII 373

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + M +YLSLS++ + FMN  N K+AL E+
Sbjct: 374 AMTMGVYLSLSLITSFFMNMYNKKVALVER 403


>gi|254503703|ref|ZP_05115854.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222439774|gb|EEE46453.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 401

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 173/399 (43%), Positives = 236/399 (59%), Gaps = 8/399 (2%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
           +      +R   + D +V  +  Q +L   L     + V N   N+E+ N++ G GF+  
Sbjct: 3   QDSAGAPARASLVNDPKVRGLFYQALLIAALIFFGYFIVTNTVANLERQNIASGWGFVEN 62

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF I Q +VPY   SSY  AI VGF+NT  +A  G+  ATIIG +VG  RLS N ++ 
Sbjct: 63  TAGFGIIQSLVPYAETSSYGQAIFVGFLNTLMVAVVGIFFATIIGFVVGIARLSNNWVIN 122

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            I   YVE+ RN+P L+ IFF Y +VL  +P       L     LN  GL  P    +  
Sbjct: 123 QIAYCYVELVRNVPLLLQIFFWYFAVLRAVPGKREKWSLFDTFHLNIAGLRMPKPIWEDG 182

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +     + ++GIV S+  +R +R   ++TG+  P+ + +  LI GLP +        ++ 
Sbjct: 183 SGFIGIALIIGIVASVVVSRWARKRQDETGQQFPVFWTALGLIIGLPVITYFVTGMPMYL 242

Query: 247 DKP--------VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           + P        +   F    G  + PEF++L  AL+ YTAAFIAEIVR+G+ AV  GQ E
Sbjct: 243 EHPNYVETGPILRRGFELGVGFNLIPEFLALTTALAIYTAAFIAEIVRAGIQAVSHGQTE 302

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A+ ALGL +    RLV++PQAMR IIPPLTSQYLNL KNSSLAVA+ F DLVSVGGT++N
Sbjct: 303 ASHALGLRNGPTLRLVVIPQAMRVIIPPLTSQYLNLTKNSSLAVAIAFPDLVSVGGTVLN 362

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QTGQAIEII IWM +YLSLS++ + FMN  N ++AL E+
Sbjct: 363 QTGQAIEIIAIWMAVYLSLSLITSAFMNWYNQRMALVER 401


>gi|229588542|ref|YP_002870661.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229360408|emb|CAY47265.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 393

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 160/380 (42%), Positives = 226/380 (59%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             D +V     QII  + +  +  +  NN   N++   ++ G  FL   AGF I Q ++ 
Sbjct: 14  FSDPKVRAWLFQIITIVAVVSLGWYLFNNTQTNLQHRGITSGFDFLERSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   SYA   ++G +NT  + F G+I AT++G ++G  RLS N ++  +  VYVEVFRN
Sbjct: 74  YTESDSYARVFVIGLLNTLLVTFIGVILATLLGFVIGVARLSPNWMINKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   +P P +S       F+++RGL+ P          FV S V+ I
Sbjct: 134 IPPLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAALAADGFWPFVASIVVAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +   R +    E TG      +    L   +P L  +     LH++ P L  FNF+G
Sbjct: 194 LAIVLMARWANKRFEATGVPFHKFWAGLALFILIPALCALIFGAPLHWEMPKLQGFNFVG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|306816387|ref|ZP_07450519.1| putative amino-acid transporter subunit [Escherichia coli NC101]
 gi|222034985|emb|CAP77728.1| amino-acid ABC transporter permease protein [Escherichia coli LF82]
 gi|305849952|gb|EFM50411.1| putative amino-acid transporter subunit [Escherichia coli NC101]
 gi|312947827|gb|ADR28654.1| predicted amino-acid transporter subunit [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 393

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 157/378 (41%), Positives = 228/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIIGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+       +  LI GLP L        L +D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALLWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|330811533|ref|YP_004355995.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379641|gb|AEA70991.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 393

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 164/380 (43%), Positives = 233/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G GFL   AGF I Q ++ 
Sbjct: 14  LSDPRVRAWVFQIVTVVAVIALGWFLFDNTQTNLQHRGITSGFGFLERSAGFGIAQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   SYA   ++G +NT  + F G+I ATI+G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTEADSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSQNWIISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   +P P  +       F+++RGL+ P   M      FV S VL I
Sbjct: 134 IPPLLQILFWYFAVFLSMPGPRAAHNFGDTFFVSSRGLNMPAALMAEGFWPFVISVVLAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +  TR +    E TG+     ++   L   +P L  +     +H++ P L  FNF+G
Sbjct: 194 VAIVLMTRWANKRFEATGEPFHKFWVGLALFLVIPALSALLFGAPVHWEMPELKGFNFVG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL +    R V++PQ
Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|300928695|ref|ZP_07144213.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300463284|gb|EFK26777.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
          Length = 399

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|262165600|ref|ZP_06033337.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262025316|gb|EEY43984.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 401

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 166/396 (41%), Positives = 228/396 (57%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
             A +    +      LY+        Q +    L+      VNN  NN+E   ++ G  
Sbjct: 6   HTASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL   AGF I Q +V Y    SY    LVG +NT  ++  G+I AT++G ++G  RLS N
Sbjct: 66  FLDHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ L   ++LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPV 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +  +   + + + GI      +  + +    TG+  P+         G P LV  AL  
Sbjct: 186 FEAGSLWVLIALLAGIAFCWVLSIWANNRQRLTGQQTPMGRYVLICCVGFPLLVYFALGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG T+ PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PISAEYPVLRGFNFQGGLTILPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL+  K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLSRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|261228274|ref|ZP_05942555.1| predicted amino-acid transporter subunit, membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255132|ref|ZP_05947665.1| predicted amino-acid transporter subunit, membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|13363615|dbj|BAB37565.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|209757448|gb|ACI77036.1| putative transport system permease protein [Escherichia coli]
 gi|209757450|gb|ACI77037.1| putative transport system permease protein [Escherichia coli]
 gi|209757452|gb|ACI77038.1| putative transport system permease protein [Escherichia coli]
 gi|209757454|gb|ACI77039.1| putative transport system permease protein [Escherichia coli]
 gi|209757456|gb|ACI77040.1| putative transport system permease protein [Escherichia coli]
          Length = 399

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|148980391|ref|ZP_01816034.1| ABC-type amino acid transport system, permease component
           [Vibrionales bacterium SWAT-3]
 gi|145961263|gb|EDK26575.1| ABC-type amino acid transport system, permease component
           [Vibrionales bacterium SWAT-3]
          Length = 401

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 172/394 (43%), Positives = 239/394 (60%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
                    S    LY+    ++  QII    L   F   VNN   N+E   ++ G  FL
Sbjct: 8   TPSQEKPEASSANLLYNPTFRSVVFQIIAIGALGAFFYTIVNNALTNLEARGIATGFDFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           S+ AGF I   +V Y    SY    +VG +NT  ++  G+I AT++G  +G  RLS+N L
Sbjct: 68  SQEAGFGIGLTLVEYDETFSYGRTFVVGLLNTALVSVLGIILATVLGFSMGIARLSSNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+    VY+E+FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL  P   ++
Sbjct: 128 VSRFAAVYIEIFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYLPAPVLE 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             +   + + ++GIV ++     + +  + TG+  P+L I+  LI GLP +V   L   +
Sbjct: 188 QGSSFVIAALIVGIVATIIINIWANNKQKLTGQQTPMLRIALSLIVGLPLVVYFVLGMPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SAEYPELKGFNFRGGISIIPELAALVLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPRARTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 368 IEIIAMTMGVYLTLSLLTSALMNIYNRKVALVER 401


>gi|190410095|ref|YP_001965619.1| probable general L-amino acid transport permease ABC transporter
           protein [Sinorhizobium meliloti]
 gi|125631125|gb|ABN47126.1| probable general L-amino acid transport permease ABC transporter
           protein [Sinorhizobium meliloti SM11]
          Length = 391

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 202/390 (51%), Positives = 272/390 (69%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
              R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G  FL  R
Sbjct: 2   RPERSKSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFLRSR 61

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG LVG GRLS N ++A 
Sbjct: 62  AGFDVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFLVGIGRLSHNWIIAK 121

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +   YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP       A
Sbjct: 122 LSLAYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPVAGEGA 181

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +  + +F++ I  S+F TR +R     TG+ LP+L+    LI GLP +  +     + FD
Sbjct: 182 EYTLLAFIIAIAASVFCTRYARQRQLATGERLPVLWTVLGLIIGLPLITFLVTGAPIGFD 241

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PV G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA ALG+  
Sbjct: 242 VPVAGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRP 301

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
              TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQTGQ+IE++
Sbjct: 302 SLTTRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQTGQSIEVV 361

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            IW+ +YLSLS+  +LFMN  NA++AL E+
Sbjct: 362 SIWLIVYLSLSLATSLFMNWYNARMALVER 391


>gi|331654868|ref|ZP_08355868.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli M718]
 gi|331048250|gb|EGI20327.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli M718]
          Length = 399

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  +       FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAASAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|194440034|ref|ZP_03072091.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 101-1]
 gi|253771900|ref|YP_003034731.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254163204|ref|YP_003046312.1| putative amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|194421038|gb|EDX37068.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 101-1]
 gi|242378803|emb|CAQ33595.1| yhdX, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253322944|gb|ACT27546.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975105|gb|ACT40776.1| predicted amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|253979261|gb|ACT44931.1| predicted amino-acid transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|323970316|gb|EGB65586.1| inner membrane transport system [Escherichia coli TA007]
          Length = 393

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|300817473|ref|ZP_07097689.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300904465|ref|ZP_07122311.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300916766|ref|ZP_07133476.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300946949|ref|ZP_07161180.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300958249|ref|ZP_07170396.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|301304262|ref|ZP_07210376.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301326287|ref|ZP_07219660.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301647045|ref|ZP_07246877.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|309793850|ref|ZP_07688276.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331643969|ref|ZP_08345100.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H736]
 gi|331679343|ref|ZP_08380015.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H591]
 gi|300315067|gb|EFJ64851.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300403627|gb|EFJ87165.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300415952|gb|EFJ99262.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300453409|gb|EFK17029.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300529771|gb|EFK50833.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300840388|gb|EFK68148.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300846988|gb|EFK74748.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301074795|gb|EFK89601.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|308122807|gb|EFO60069.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|315137852|dbj|BAJ45011.1| putative amino-acid transporter subunit [Escherichia coli DH1]
 gi|315257197|gb|EFU37165.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|331037440|gb|EGI09664.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H736]
 gi|331073408|gb|EGI44731.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H591]
          Length = 399

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|324020752|gb|EGB89971.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
          Length = 399

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|258621542|ref|ZP_05716575.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258586160|gb|EEW10876.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
          Length = 401

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 167/396 (42%), Positives = 227/396 (57%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
             A +    +      LY+        Q +    L+      VNN  NN+E   ++ G  
Sbjct: 6   HAASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL   AGF I Q +V Y    SY    LVG +NT  ++  G+I AT++G ++G  RLS N
Sbjct: 66  FLDHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ L   ++LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPV 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +  +   + + + GI      +  + +    TG+  P+         G P LV  AL  
Sbjct: 186 FEAGSLWVLIALLAGIAFCWVLSIWANNRQRLTGQQTPMGRYVLICCVGFPLLVYFALGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|15803804|ref|NP_289838.1| putative transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|38704157|ref|NP_312169.2| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|168758501|ref|ZP_02783508.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4401]
 gi|168764868|ref|ZP_02789875.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4501]
 gi|168777687|ref|ZP_02802694.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4196]
 gi|168802617|ref|ZP_02827624.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC508]
 gi|188025287|ref|ZP_02777415.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4113]
 gi|189010706|ref|ZP_02808847.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4076]
 gi|189403224|ref|ZP_02794142.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4486]
 gi|189404774|ref|ZP_02811171.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC869]
 gi|195940013|ref|ZP_03085395.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808155|ref|ZP_03250492.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4206]
 gi|208814005|ref|ZP_03255334.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4045]
 gi|208821360|ref|ZP_03261680.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4042]
 gi|209398125|ref|YP_002272731.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4115]
 gi|217327751|ref|ZP_03443834.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. TW14588]
 gi|254795211|ref|YP_003080048.1| putative amino-acid ABC transporter membrane protein [Escherichia
           coli O157:H7 str. TW14359]
 gi|291284636|ref|YP_003501454.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O55:H7 str. CB9615]
 gi|293416694|ref|ZP_06659333.1| general L-amino acid transport system permease [Escherichia coli
           B185]
 gi|12517900|gb|AAG58398.1|AE005554_9 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|187767136|gb|EDU30980.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4196]
 gi|188013746|gb|EDU51868.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4113]
 gi|188998882|gb|EDU67868.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4076]
 gi|189354692|gb|EDU73111.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4401]
 gi|189361801|gb|EDU80220.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4486]
 gi|189365199|gb|EDU83615.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4501]
 gi|189373997|gb|EDU92413.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC869]
 gi|189375430|gb|EDU93846.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC508]
 gi|208727956|gb|EDZ77557.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4206]
 gi|208735282|gb|EDZ83969.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4045]
 gi|208741483|gb|EDZ89165.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4042]
 gi|209159525|gb|ACI36958.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4115]
 gi|217320118|gb|EEC28543.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. TW14588]
 gi|254594611|gb|ACT73972.1| predicted amino-acid transporter subunit, membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290764509|gb|ADD58470.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O55:H7 str. CB9615]
 gi|291432050|gb|EFF05033.1| general L-amino acid transport system permease [Escherichia coli
           B185]
 gi|320189618|gb|EFW64277.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. EC1212]
 gi|320639915|gb|EFX09506.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. G5101]
 gi|320645631|gb|EFX14640.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H- str. 493-89]
 gi|320650941|gb|EFX19398.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H- str. H 2687]
 gi|320656322|gb|EFX24234.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320662012|gb|EFX29420.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666848|gb|EFX33827.1| Amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. LSU-61]
 gi|326337966|gb|EGD61800.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. 1125]
 gi|326347535|gb|EGD71260.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. 1044]
          Length = 393

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|86148623|ref|ZP_01066905.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. MED222]
 gi|218709393|ref|YP_002417014.1| amino-acid ABC transporter permease [Vibrio splendidus LGP32]
 gi|85833579|gb|EAQ51755.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. MED222]
 gi|218322412|emb|CAV18565.1| Amino-acid ABC transporter permease protein [Vibrio splendidus
           LGP32]
          Length = 401

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 167/389 (42%), Positives = 237/389 (60%), Gaps = 1/389 (0%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
                     Y+    +I  QI+    L   F   VNN   N++   ++ G  FLS+ AG
Sbjct: 13  KPQPKSANLFYNPTFRSIVFQILAVAALCAFFYTIVNNALTNLDSRGIATGFDFLSQEAG 72

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F I   ++ Y    SY     +G +NT  ++  G++ AT++G  +G  RLS+N LV+   
Sbjct: 73  FGIGLTLIEYDETFSYGRTFFIGLLNTALVSVLGIMLATVLGFSMGIARLSSNWLVSRFA 132

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            VY+E+FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP   ++  + I
Sbjct: 133 AVYIEIFRNIPLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVLEQGSSI 192

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            + S ++GI+ +      + +  + TG+  P+L I+  LI GLP +    +   +  + P
Sbjct: 193 VIASLIVGIIATFVINIWANNKQKLTGQQTPMLRIAAALIVGLPLVTYFVMGMPISAEYP 252

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           VL  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   +
Sbjct: 253 VLKGFNFKGGISIIPELAALMLALSIYTAAFIAEIVRSGINAVNHGQTEAAMSLGLPRTR 312

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIIL 368
             +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE+I 
Sbjct: 313 TLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEVIA 372

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 373 MTMGVYLTLSLLTSALMNIYNRKVALVER 401


>gi|284923283|emb|CBG36377.1| ABC transporter, permease protein [Escherichia coli 042]
          Length = 399

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 160/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   +I A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIIFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|157162751|ref|YP_001460069.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           HS]
 gi|157068431|gb|ABV07686.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli HS]
          Length = 393

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGCFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|49176333|ref|YP_026209.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89110029|ref|AP_003809.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|157158458|ref|YP_001464744.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           E24377A]
 gi|170018488|ref|YP_001723442.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170082797|ref|YP_001732117.1| amino-acid ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188494856|ref|ZP_03002126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 53638]
 gi|191169155|ref|ZP_03030913.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B7A]
 gi|193066460|ref|ZP_03047505.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E22]
 gi|193071518|ref|ZP_03052428.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E110019]
 gi|194430243|ref|ZP_03062740.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B171]
 gi|218696969|ref|YP_002404636.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|238902367|ref|YP_002928163.1| putative amino-acid transporter subunit [Escherichia coli BW2952]
 gi|254038435|ref|ZP_04872493.1| amino acid ABC transporter [Escherichia sp. 1_1_43]
 gi|256018817|ref|ZP_05432682.1| putative amino-acid transporter subunit [Shigella sp. D9]
 gi|256024157|ref|ZP_05438022.1| putative amino-acid transporter subunit [Escherichia sp. 4_1_40B]
 gi|260846074|ref|YP_003223852.1| putative transport system permease protein [Escherichia coli
           O103:H2 str. 12009]
 gi|301028301|ref|ZP_07191561.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|307139957|ref|ZP_07499313.1| putative transport system permease protein [Escherichia coli H736]
 gi|307314973|ref|ZP_07594561.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|312972462|ref|ZP_07786636.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 1827-70]
 gi|54042337|sp|P45767|YHDX_ECOLI RecName: Full=Putative amino-acid ABC transporter permease protein
           yhdX
 gi|48994930|gb|AAT48174.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|85676060|dbj|BAE77310.1| predicted amino-acid transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|157080488|gb|ABV20196.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E24377A]
 gi|169753416|gb|ACA76115.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169890632|gb|ACB04339.1| predicted amino-acid transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|188490055|gb|EDU65158.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 53638]
 gi|190900797|gb|EDV60588.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B7A]
 gi|192925889|gb|EDV80538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E22]
 gi|192955155|gb|EDV85648.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E110019]
 gi|194411714|gb|EDX28039.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B171]
 gi|218353701|emb|CAU99964.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|226840059|gb|EEH72080.1| amino acid ABC transporter [Escherichia sp. 1_1_43]
 gi|238862152|gb|ACR64150.1| predicted amino-acid transporter subunit [Escherichia coli BW2952]
 gi|257761221|dbj|BAI32718.1| putative transport system permease protein [Escherichia coli
           O103:H2 str. 12009]
 gi|260447705|gb|ACX38127.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|299878644|gb|EFI86855.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|306905556|gb|EFN36088.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|310334839|gb|EFQ01044.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 1827-70]
 gi|315062568|gb|ADT76895.1| predicted amino-acid transporter subunit [Escherichia coli W]
 gi|315617079|gb|EFU97689.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 3431]
 gi|323162954|gb|EFZ48789.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli E128010]
 gi|323376845|gb|ADX49113.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323936247|gb|EGB32539.1| inner membrane transport system [Escherichia coli E1520]
 gi|323941638|gb|EGB37817.1| inner membrane transport system [Escherichia coli E482]
 gi|332102249|gb|EGJ05595.1| his/Glu/Gln/Arg/opine ABC transporter permease [Shigella sp. D9]
          Length = 393

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|170682235|ref|YP_001745539.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           SMS-3-5]
 gi|194435092|ref|ZP_03067329.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella dysenteriae 1012]
 gi|209920742|ref|YP_002294826.1| amino acid ABC transporter permease [Escherichia coli SE11]
 gi|218555834|ref|YP_002388747.1| amino-acid ABC transporter membrane protein [Escherichia coli IAI1]
 gi|260870020|ref|YP_003236422.1| putative transport system permease protein [Escherichia coli
           O111:H- str. 11128]
 gi|293449592|ref|ZP_06664013.1| general L-amino acid transport system permease [Escherichia coli
           B088]
 gi|170519953|gb|ACB18131.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli SMS-3-5]
 gi|194416654|gb|EDX32786.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella dysenteriae 1012]
 gi|209914001|dbj|BAG79075.1| amino acid ABC transporter permease component [Escherichia coli
           SE11]
 gi|218362602|emb|CAR00227.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|257766376|dbj|BAI37871.1| putative transport system permease protein [Escherichia coli
           O111:H- str. 11128]
 gi|291322682|gb|EFE62111.1| general L-amino acid transport system permease [Escherichia coli
           B088]
 gi|320181543|gb|EFW56461.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella boydii ATCC 9905]
 gi|323173471|gb|EFZ59100.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli LT-68]
 gi|323178550|gb|EFZ64126.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 1180]
 gi|323183029|gb|EFZ68428.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli 1357]
 gi|323946884|gb|EGB42900.1| inner membrane transport system [Escherichia coli H120]
 gi|324119449|gb|EGC13332.1| inner membrane transport system [Escherichia coli E1167]
 gi|332086493|gb|EGI91640.1| general L-amino acid transport system permease protein aapQ
           [Shigella dysenteriae 155-74]
 gi|332087262|gb|EGI92395.1| general L-amino acid transport system permease protein aapQ
           [Shigella boydii 5216-82]
          Length = 393

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|90419550|ref|ZP_01227460.1| amino acid ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336487|gb|EAS50228.1| amino acid ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 396

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 185/391 (47%), Positives = 256/391 (65%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
            +V R      FL +  V +I +Q+ L + L +   W V+N   N+  +N++ G GFL+E
Sbjct: 6   HSVPRQGGGASFLNNPTVRSIVIQVALVVGLALFTWWIVDNTARNLAAANIASGFGFLAE 65

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           RAGF+I      Y+S+++Y  AIL+G  NT  +A SG+I ATI+G LVG GRLS N LV 
Sbjct: 66  RAGFDIAITPFTYSSNATYGHAILIGIANTLVVAISGIILATIVGFLVGIGRLSRNFLVR 125

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            I  VYVE FRNIPPL+VI F Y  VLSVL  P      P G++L NRGL  P +  +  
Sbjct: 126 SISTVYVETFRNIPPLLVILFWYFGVLSVLSGPRGIDESPVGVYLTNRGLQIPAILFEPV 185

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   + +  +G   ++   R S+     TG+  P+L+ +  +I GLP LV +A       
Sbjct: 186 AWATLAALAVGTAATILYARRSKKHQMATGERRPVLWPAIGMIVGLPLLVFVATGIPATL 245

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P   +FN  GG  + PEF++L++ALS YTAAF+AEIVR+G+++V +GQ EAA ALGLT
Sbjct: 246 EFPTATRFNLAGGIQIRPEFIALWLALSIYTAAFVAEIVRAGILSVSKGQTEAASALGLT 305

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  RLV++PQA R IIPPLTSQYLNL KNSSL +A+G+ +LV+VG T++NQ+GQ+IE+
Sbjct: 306 RGKLLRLVVVPQAFRVIIPPLTSQYLNLTKNSSLGLAIGYPELVAVGSTVLNQSGQSIEV 365

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++IWM +YL LSI ++L MN  NAK+AL E+
Sbjct: 366 VVIWMTVYLGLSITVSLIMNWFNAKMALVER 396


>gi|300925985|ref|ZP_07141808.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300417929|gb|EFK01240.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
          Length = 399

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA 
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAR 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|331664878|ref|ZP_08365783.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA143]
 gi|331058126|gb|EGI30108.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA143]
          Length = 393

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 160/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   +I A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIIFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|150378346|ref|YP_001314940.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150396326|ref|YP_001326793.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150027841|gb|ABR59958.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150032893|gb|ABR65007.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 397

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 203/397 (51%), Positives = 273/397 (68%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M         R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G
Sbjct: 1   MAIGVTNVPERSKSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             FL  RAGF++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG LVG GRLS
Sbjct: 61  YDFLRSRAGFDVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFLVGIGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N ++A +   YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP 
Sbjct: 121 HNWIIAKLSLAYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPR 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                 A+  + +F++ I  S+F TR +R     TG+ LP+L+    LI GLP +  +  
Sbjct: 181 PVAGEGAEYTLLAFIIAIAASVFFTRYARQRQLATGERLPVLWTVLGLIIGLPLITFLVT 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              + FD PV G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA
Sbjct: 241 GAPIGFDVPVAGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+     TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQT
Sbjct: 301 HALGIRPSLTTRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQ+IE++ IW+ +YLSLS+  +LFMN  NA++AL E+
Sbjct: 361 GQSIEVVSIWLIVYLSLSLATSLFMNWYNARMALVER 397


>gi|262404013|ref|ZP_06080568.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
 gi|262349045|gb|EEY98183.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
          Length = 401

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 166/395 (42%), Positives = 228/395 (57%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
            A +    +   +  LY+    ++  Q+I    L       VNN  NN+E   ++ G  F
Sbjct: 7   PASQPSDAHSKHVNLLYNPTFRSVLFQLIAVCALGFFLYTIVNNALNNLESRGIATGFAF 66

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q +V Y    SY    LVG +NT  ++  G+  AT++G  +G  RLS N 
Sbjct: 67  LDHVAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIFFATLLGFALGIARLSTNW 126

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L++ +  VY+E FRNIP L+ IFF Y  VL  LP   +S+ L   ++LN +GL       
Sbjct: 127 LISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKNSMHLGEWLYLNVKGLYLAKPIF 186

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           ++ +     S ++GI      +  + +    TG+  P+         G P LV   L   
Sbjct: 187 ESGSLWVFISLLMGIAACWLLSIWANNRQRLTGQQTPMGRYILIGCVGFPLLVYFLLGQP 246

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  + P L  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++L
Sbjct: 247 ISAEYPALRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSL 306

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQ
Sbjct: 307 GLPRSKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQ 366

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 367 AIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|320202179|gb|EFW76754.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli EC4100B]
          Length = 393

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 158/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GL  L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLHLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|187479527|ref|YP_787552.1| L-amino acid ABC transporter permease [Bordetella avium 197N]
 gi|115424114|emb|CAJ50667.1| L-amino acid ABC transporter, permease protein [Bordetella avium
           197N]
          Length = 392

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 170/397 (42%), Positives = 236/397 (59%), Gaps = 5/397 (1%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M    +    R  S      D  V  +  Q++   L+ +   + V+N  +N+   N+S G
Sbjct: 1   MATTQKNAPRRRLS----WNDPSVRAVVYQVVALALVALAAWFLVSNTLHNLTVRNISTG 56

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
            GFL   AGF I +  + YT   +Y  AI+VG +NT  +A  G+I ATI+GTL+G GRLS
Sbjct: 57  FGFLDREAGFAIGETPIAYTPADTYGRAIMVGLLNTLRVAVLGIILATILGTLIGIGRLS 116

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N LVA +  +YVEV RN+P L+ +FF Y  +   +P P  +     G+F++NRG+  P 
Sbjct: 117 KNWLVARLTSLYVEVMRNVPLLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGIKIPE 176

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              + +    +    + I+ +L+    ++     TG+  PL+  +  L+  LP L  +  
Sbjct: 177 AVGN-SLDWILLGLAIAIIATLYLGHWAKKRQHATGQVFPLIRTAIGLLIVLPVLGWLLS 235

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
             QL    P L  FNF GG T++PEF +L   L  YT+AFIAE+VRSG+ AV  GQ EAA
Sbjct: 236 GMQLTLTMPELKGFNFQGGLTLTPEFAALLAGLVIYTSAFIAEVVRSGIQAVNNGQWEAA 295

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL      RLV+LPQA+R IIPP+TSQYLNL KNSSLAVA+G+ D+VSV  T +NQT
Sbjct: 296 GALGLRRSLVLRLVVLPQALRVIIPPMTSQYLNLTKNSSLAVAIGYPDIVSVVNTTLNQT 355

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIE ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 356 GQAIEGILIIMAAYLTVSLSISIFMNWYNKRIALVER 392


>gi|114706425|ref|ZP_01439327.1| probable general l-amino acid transport permease abc transporter
           protein [Fulvimarina pelagi HTCC2506]
 gi|114538286|gb|EAU41408.1| probable general l-amino acid transport permease abc transporter
           protein [Fulvimarina pelagi HTCC2506]
          Length = 400

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 173/380 (45%), Positives = 246/380 (64%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L D    + ++Q  L + L +   W V+N   N+ ++N++ G GFLS RAGF+I Q  +
Sbjct: 21  LLNDPFFRSFAIQATLIIGLALFVWWLVDNTARNLAQANIASGFGFLSNRAGFDIGQTPI 80

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y++ ++Y  A++VG VNT  +A +G++ ATI+G ++G GRLS N LV  +  VYVEVFR
Sbjct: 81  EYSNSATYGRALIVGLVNTLIVAGTGIVFATIVGFIIGIGRLSQNFLVRLLSTVYVEVFR 140

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NIPPL+VI F Y  V+S L  P      PFG +L NRGL  P+   +  A      F  G
Sbjct: 141 NIPPLLVILFWYFGVISALGSPRGISENPFGFYLTNRGLQTPSFAFEVLAWASFVVFAAG 200

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +  ++   R +R    KTG   P L+    L+ GLP +  +        D P  G FN  
Sbjct: 201 LAAAIVLARRNRRHQLKTGDRKPTLWPVLGLVVGLPLVAFLVTGMPATIDIPTPGTFNLQ 260

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  + PEF++L++ALS YTAAFIAEIVR+G+++V +GQ EA+ ALGL      RLV++P
Sbjct: 261 GGFQIKPEFVALFLALSLYTAAFIAEIVRAGILSVSKGQTEASSALGLRRGLTLRLVIVP 320

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R IIPPLTSQYLNL+KNSSL +A+G+ +L ++G T++NQ+GQ+IEII+I M +YLS+
Sbjct: 321 QAFRVIIPPLTSQYLNLIKNSSLGLAIGYPELFAIGTTVLNQSGQSIEIIVICMGVYLSI 380

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI +++FMN  N+K+AL E+
Sbjct: 381 SIAVSIFMNWFNSKMALAER 400


>gi|70728431|ref|YP_258180.1| general amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68342730|gb|AAY90336.1| general amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 393

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QII  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++ 
Sbjct: 14  LSDPRVRAWLFQIITLVAVVSLGWFLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLIA 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   SYA   ++G +NT  + F G+I AT++G ++G  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTEADSYARVFVIGLLNTLLVTFIGVILATLLGFIIGVARLSPNWIISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   +P P +S       F+++RGL+ P   M      FV S VL I
Sbjct: 134 IPPLLQILFWYFAVFLTMPGPRNSHNFGDMFFVSSRGLNMPAAQMAPGFWAFVASLVLAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R +    E TG      +    L+  +P L  +     +H++ P L  FNF+G
Sbjct: 194 GAIALMCRWANRRFEATGVPFHKFWSGLGLLLVIPALCTLIFGSPVHWEMPKLAGFNFVG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL +    R V++PQ
Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRNGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|300824983|ref|ZP_07105082.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300522549|gb|EFK43618.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
          Length = 399

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGCVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|293412638|ref|ZP_06655361.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291469409|gb|EFF11900.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 393

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 156/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAI 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      ++  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|309703688|emb|CBJ03029.1| ABC transporter, permease protein [Escherichia coli ETEC H10407]
          Length = 393

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 159/378 (42%), Positives = 230/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRTGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIEAIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|323966447|gb|EGB61881.1| inner membrane transport system [Escherichia coli M863]
 gi|327251363|gb|EGE63052.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli STEC_7v]
          Length = 393

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 156/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAI 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      ++  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGIFRFNKTYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|258627557|ref|ZP_05722334.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258580139|gb|EEW05111.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
          Length = 401

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 166/396 (41%), Positives = 226/396 (57%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
             A +    +      LY+        Q +    L+      VNN  NN+E   ++ G  
Sbjct: 6   HAASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL   AGF I Q +V Y    SY    LVG +NT  ++  G+I AT++G ++G  RLS N
Sbjct: 66  FLDHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ L   ++LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPV 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +  +   + + + GI      +  + +    TG+  P+           P LV  AL  
Sbjct: 186 FEAGSLWVLIALLAGIAFCWVLSIWANNRQRLTGQQTPMGRYVLICCVVFPLLVYFALGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|84394264|ref|ZP_00992990.1| ABC-type amino acid transport system, permease component [Vibrio
           splendidus 12B01]
 gi|84375103|gb|EAP92024.1| ABC-type amino acid transport system, permease component [Vibrio
           splendidus 12B01]
          Length = 401

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 165/394 (41%), Positives = 237/394 (60%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           +              Y+    +I  QI+    L   F   VNN   N++   ++ G  FL
Sbjct: 8   SPAQAKPQPKSANLFYNPTFRSIVFQILAVGALCAFFYTIVNNALTNLDSRGIATGFDFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           S+ AGF I   ++ Y    SY     +G +NT  ++  G++ AT++G  +G  RLS+N L
Sbjct: 68  SQEAGFGIGLTLIEYDETFSYGRTFFIGLLNTALVSVLGIMLATVLGFSMGIARLSSNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+    +Y+E+FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP   ++
Sbjct: 128 VSRFAAIYIEIFRNIPLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVLE 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             + I + S + G++ +      + +  + TG+  P+L I+  LI GLP +    +   +
Sbjct: 188 QGSSIVIASLITGVIATFVINIWANNKQKLTGQQTPMLRIAAALIVGLPLVTYFVMGMPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + PVL  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SAEYPVLKGFNFKGGISIIPELAALMLALSIYTAAFIAEIVRSGINAVNHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPRTRTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE+I + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 368 IEVIAMTMGVYLTLSLLTSALMNIYNRKVALVER 401


>gi|323492613|ref|ZP_08097757.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
 gi|323312988|gb|EGA66108.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
          Length = 400

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 175/394 (44%), Positives = 240/394 (60%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A K+     S     Y+     +  QII    L   F   VNN   N+E   ++ G  FL
Sbjct: 7   AAKSDNGPNSNANLFYNPTFRAVVFQIIAISALVFFFYTIVNNALTNLEARGIATGFDFL 66

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I   ++ Y    SY    +VG +NT  ++F G+I AT+IG ++G  RLS+N L
Sbjct: 67  TQEAGFGIGLTLIEYDETFSYGRTFMVGLLNTALVSFFGIILATVIGFVMGVARLSSNWL 126

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+    VY+E FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    +
Sbjct: 127 VSRFAAVYIETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVFE 186

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             + I + SFV+GIV ++     +++  + TG+  P+  I+  L   LP +V       +
Sbjct: 187 QGSSIVIASFVIGIVATILIGVWAKNKQKLTGQQTPMGRIALGLCIALPVVVYFLAGAPI 246

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 247 SADYPELKGFNFKGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLG 306

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 307 LPRSRTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 366

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 367 IEIIAMTMAVYLTLSLLTSALMNLYNKKVALVER 400


>gi|54309364|ref|YP_130384.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
 gi|46913800|emb|CAG20582.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 403

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 172/390 (44%), Positives = 230/390 (58%), Gaps = 1/390 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           V     +    Y+     I  QII  L L   F   +NN   N++   ++ G GFL+E A
Sbjct: 14  VASPPKKQNLFYNPTFRAIIFQIIAVLGLLFFFYNIINNALENLDARGIATGFGFLNEEA 73

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF I   ++ Y    +Y     VG +NT  ++  G+  ATIIG  VG  RLS+N L++  
Sbjct: 74  GFGIGLTLIDYDETYTYGRTFFVGLLNTALVSVLGIFLATIIGFTVGIARLSSNWLISRF 133

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
              Y+E+FRNIP L+ IFF Y +VL  LP P  S+ +    F+N RGL       +  + 
Sbjct: 134 AAFYIEIFRNIPLLLQIFFWYFAVLQALPSPRQSLSIGESFFINVRGLYLAGPVFNEGSG 193

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
               +  L IVLS+     S    + TG+  P+L  +  ++ GLP +   A    +  + 
Sbjct: 194 WIFAALALAIVLSIIYAIRSHKKQQDTGEQSPVLLTTIGMVIGLPLIAFFAAGMPVSIEY 253

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EA++ALGL   
Sbjct: 254 PELKGFNFRGGISILPELAALLVALSIYTASFIAEIVRSGINAVNHGQTEASLALGLPRS 313

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
           K  RLV++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII
Sbjct: 314 KTLRLVVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEII 373

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + M +YLSLS+  + FMN  N K+AL E+
Sbjct: 374 AMTMGVYLSLSLTTSFFMNMYNKKVALVER 403


>gi|153835220|ref|ZP_01987887.1| general L-amino acid transport system permease protein AapQ [Vibrio
           harveyi HY01]
 gi|148868286|gb|EDL67418.1| general L-amino acid transport system permease protein AapQ [Vibrio
           harveyi HY01]
          Length = 401

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 170/394 (43%), Positives = 240/394 (60%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           +  T+++       +Y+    +   QII    L   F   +NN   N+E   ++ G GFL
Sbjct: 8   SPSTMSKPSGSKSLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLEARGIATGFGFL 67

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I   ++ Y    SY    +VG +NT  ++  G+I AT+IG ++G  RLS+N L
Sbjct: 68  NQEAGFGIGLTLIEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWL 127

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ +  VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP   M+
Sbjct: 128 VSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVME 187

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             +   + + ++GI+ S+     + +    TG+  P+  I   L+  LP +V       +
Sbjct: 188 AGSSFVIAALIIGIIASILINVWANNKQRLTGQQTPMGRIVFGLVIVLPLVVYFLAGMPI 247

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LG
Sbjct: 248 SLQYPELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLG 307

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQA
Sbjct: 308 LPRTKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQA 367

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 368 IEIIAMTMGVYLTLSLITSALMNVYNRKVALVER 401


>gi|323979011|gb|EGB74089.1| inner membrane transport system [Escherichia coli TW10509]
          Length = 393

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 155/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAI 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      ++  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGIFRFNKTYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R +++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQIIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|262171610|ref|ZP_06039288.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|261892686|gb|EEY38672.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
          Length = 401

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 166/396 (41%), Positives = 226/396 (57%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
             A +    +      LY+        Q +    L+      VNN  NN+E   ++ G  
Sbjct: 6   HAASQHADAHSKHANLLYNPTFRAAVFQFLAVCALSFFLYTIVNNALNNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL   AGF I Q +V Y    SY    LVG +NT  ++  G+I AT++G ++G  RLS N
Sbjct: 66  FLDHAAGFGISQSLVDYDETYSYGRTFLVGLLNTALVSVLGIIFATLLGFVLGIARLSRN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRNIP L+ IFF Y  VL  LP    S+ L   ++LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNIPLLLQIFFWYFVVLQALPSAKQSMHLGEWLYLNVKGLYLVKPV 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +  +   + + + GI      +  + +    TG+  P+           P LV  AL  
Sbjct: 186 FEAGSLWVLIALLAGITFCWVLSIWANNRQRLTGQQTPMGRYVLICCVVFPLLVYFALGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG TV PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PISAEYPVLRGFNFQGGLTVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 306 LGLPRAKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 365

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 366 QAIEIISMTMLVYLSLSLLTSALMNLYNRKVALVER 401


>gi|110633467|ref|YP_673675.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110284451|gb|ABG62510.1| general L-amino acid ABC transporter membrane protein
           [Chelativorans sp. BNC1]
          Length = 396

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 182/391 (46%), Positives = 267/391 (68%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
            +++    R+  + + R   + +Q +L + +     W +NN  NN+ ++N++ G  FLS 
Sbjct: 6   SSISLSHERIGLMRNPRTRGLIIQTVLIIAILAFAAWLINNTVNNLTRANIASGFDFLSA 65

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           RAGF+I Q  + Y+++SSY  A+LVG  NT  +A +G++ ATI+G ++G GRLS N LV 
Sbjct: 66  RAGFDIGQVPIAYSANSSYGRALLVGITNTVIVAGAGIVLATIVGFVIGIGRLSRNYLVR 125

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  +YVE FRN+PPL+VI F Y  VLSVLP+P  ++ LPFG +L+NRGL  P    +  
Sbjct: 126 GLSTIYVETFRNVPPLLVILFWYFGVLSVLPLPREALELPFGAYLSNRGLQMPAARFEPL 185

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   + +F LGI  ++  +R ++    +TG+   +L+    LIFGLP +V +     + F
Sbjct: 186 AVWTLAAFALGIAAAVLLSRRNKLRQMRTGERQSILWPVLGLIFGLPLIVFVVTGLPVSF 245

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P   +FN +GG  + PEF+SL++ALS YTAAFIAEI+R+G++AV RGQ EAA ALGLT
Sbjct: 246 EAPQATRFNLVGGWQIRPEFLSLFLALSFYTAAFIAEIIRAGILAVSRGQTEAASALGLT 305

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R++ RLV++PQA R +IPPLTSQYLNL KNSSL +AVG+ +LV+VG T++NQTGQ++E+
Sbjct: 306 RRQSLRLVVVPQAFRVVIPPLTSQYLNLTKNSSLGLAVGYPELVAVGSTVLNQTGQSVEV 365

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + IWM +YL LS+  A FMN  NA++AL E+
Sbjct: 366 VAIWMVVYLGLSVATAAFMNWFNARVALVER 396


>gi|331674784|ref|ZP_08375543.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA280]
 gi|331068223|gb|EGI39619.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA280]
          Length = 399

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 156/378 (41%), Positives = 228/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI   + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQIFAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAI 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      ++  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|330429591|gb|AEC20925.1| putative amino acid ABC transporter permease protein [Pusillimonas
           sp. T7-7]
          Length = 394

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 166/392 (42%), Positives = 237/392 (60%), Gaps = 1/392 (0%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
           + +V +   R     D     +  Q+++  ++ +   + V+N  +N+   N+S G  FL 
Sbjct: 4   KTSVPQAPKRRLSWNDPGFRALIYQVLILGIVGLGVWYLVSNTLHNLAIRNISTGFDFLH 63

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
             AGF I + ++ YT   +Y  AI VG +NT  ++  G+I AT+ GT++G  RLS N LV
Sbjct: 64  REAGFAIGESVIDYTPADTYGRAIWVGILNTLRVSVVGIIAATLFGTMLGIARLSKNWLV 123

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
           + +   YVEV RNIP L+ +FF Y  +  V+P P  ++    G+F++NRGL  P L  D 
Sbjct: 124 SRVASAYVEVMRNIPLLLQLFFWYAIITEVMPGPRSALNPIPGVFISNRGLKMPALQGDA 183

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                V    L IV  +     ++   E TG   PL+  +  L+  LP    +     L 
Sbjct: 184 -LDWMVAGLGLAIVAIIVLGHWAKKRQEATGIIFPLVRAALGLLVVLPVAGWLISGASLS 242

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            + PV+  FNF GG ++SPEF++L   L  YT+AF+AE+VRSG+ +V RGQ EAA A+GL
Sbjct: 243 LEMPVMKGFNFSGGISLSPEFVALLTGLIIYTSAFVAEVVRSGIQSVNRGQWEAAEAIGL 302

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             R+  RLV+LPQA+R I+PP+TSQYLNL KNSSLAVAVG+ D+VSV  T +NQTGQAIE
Sbjct: 303 PRRRLLRLVILPQALRVIVPPMTSQYLNLTKNSSLAVAVGYPDIVSVVNTTLNQTGQAIE 362

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ILI M  YL++S+ I++FMN  N +IAL E+
Sbjct: 363 GILIIMAAYLTVSLSISIFMNWYNKRIALVER 394


>gi|301022228|ref|ZP_07186143.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300397641|gb|EFJ81179.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 399

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 156/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYRRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFIVTVVIAIAI 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      ++  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPVAVMLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|300937396|ref|ZP_07152231.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300457570|gb|EFK21063.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 399

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 158/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+     ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFLFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 381

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 382 TISLLMNIYNRRIAIVER 399


>gi|324115127|gb|EGC09091.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 393

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 155/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAI 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      ++  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGIFRFNKTYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R +++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQIIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIIER 393


>gi|331684910|ref|ZP_08385502.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H299]
 gi|331078525|gb|EGI49731.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli H299]
          Length = 393

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 156/378 (41%), Positives = 228/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI   + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQIFAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ I +
Sbjct: 136 PLLQIFFWYFAVLRNLPRPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILTVVIAIAI 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      ++  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPVAVVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|298291388|ref|YP_003693327.1| polar amino acid ABC transporter inner membrane protein [Starkeya
           novella DSM 506]
 gi|296927899|gb|ADH88708.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 398

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 174/392 (44%), Positives = 247/392 (63%), Gaps = 1/392 (0%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
           + V    +   F+ D +V +I +Q++  +L+ ++      N  +N+    ++ G GFL  
Sbjct: 7   EPVQGRSNSASFINDPKVRSIGLQLVALILVILLGWMFAENARDNLAAQKIATGFGFLDN 66

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF I Q ++PY+  S+Y  A LVG +NT  +A  G+  ATIIG LVG GRLS N +V 
Sbjct: 67  TAGFGISQTLIPYSETSTYGRAFLVGLLNTILVAVVGIFLATIIGFLVGIGRLSKNFVVR 126

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            I   YVEV RN+PPL  I F Y +VLS +P P  SI +   +F++NRGL  P       
Sbjct: 127 LISTTYVEVLRNLPPLFQILFWYLAVLSAMPSPRQSISVFGEVFISNRGLIIPRPLFGEG 186

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +++F   ++  +     +R   E+TG+  P+L++   ++  +P   +I   + + F
Sbjct: 187 TGLVLWAFGAALLAVILIGYWARGRREETGQRFPMLWVGLGILVLVPLAAMIYTGFPITF 246

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           ++P L  FNF GG  V PEF++L +AL+ YTAAFIAE VRSG++AV  GQ EAA +LGL 
Sbjct: 247 ERPELKGFNFAGGVRVIPEFVALTVALATYTAAFIAENVRSGIMAVSHGQTEAAHSLGLR 306

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
           + +  RLV++PQAMR IIPPLT+QYLNL KNSSLAV +G+ DLV+V  GT +NQTGQAIE
Sbjct: 307 NGQTLRLVVIPQAMRVIIPPLTNQYLNLTKNSSLAVGIGYPDLVAVFAGTSLNQTGQAIE 366

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II I M +YL LSI+ +L MN  N +IAL E+
Sbjct: 367 IIAITMGVYLVLSILTSLIMNAYNKRIALVER 398


>gi|218702041|ref|YP_002409670.1| amino-acid ABC transporter membrane protein [Escherichia coli
           IAI39]
 gi|218372027|emb|CAR19885.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
          Length = 393

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 158/378 (41%), Positives = 229/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+     ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFLFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|262274330|ref|ZP_06052141.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP
           101886]
 gi|262220893|gb|EEY72207.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP
           101886]
          Length = 402

 Score =  309 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 173/390 (44%), Positives = 237/390 (60%), Gaps = 1/390 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
             R   +   +Y+    ++  Q I  + L       VNN   N++   ++ G GFL++ A
Sbjct: 13  AARPERKQSIIYNPTFRSVIFQAIAIIALVFFVYTIVNNALANLDSRGIATGFGFLTQEA 72

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF I   ++ Y    SY     VG +NT  ++  G+I ATIIG L+G  RLS+N LV+  
Sbjct: 73  GFGIGLTLIEYNETYSYDRTFFVGLLNTALVSVLGIIFATIIGFLMGIARLSSNWLVSRF 132

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             VY+E FRNIP L+ IFF Y +VL  LP P  SI +   +F+N RGL       +  + 
Sbjct: 133 AAVYIETFRNIPLLLQIFFWYFAVLQALPSPRESISVGDSLFINVRGLYMTRPVFEEGSN 192

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +   +F + +V S   +R ++   E TG+  P+  +S   I GLP +        +  + 
Sbjct: 193 LIFIAFAVSLVFSFVFSRWAKRKQEATGEQTPVFIVSLAAIIGLPLIAFFVAGMPVSLEY 252

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA+ALGL+  
Sbjct: 253 PELKGFNFRGGISIIPELAALVLALSIYTASFIAEIVRSGINAVSHGQTEAAMALGLSRS 312

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
           K  RLV++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII
Sbjct: 313 KTLRLVVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEII 372

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + M +YL+LS++ +L MN  NAK+AL E+
Sbjct: 373 AMTMGVYLTLSLLTSLVMNIYNAKMALVER 402


>gi|149191355|ref|ZP_01869608.1| ABC-type amino acid transport system, permease component [Vibrio
           shilonii AK1]
 gi|148834834|gb|EDL51818.1| ABC-type amino acid transport system, permease component [Vibrio
           shilonii AK1]
          Length = 400

 Score =  309 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 169/391 (43%), Positives = 240/391 (61%), Gaps = 1/391 (0%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
              +       LY+    +I  Q+I  L L + F   VNN  NN+    ++ G  FL++ 
Sbjct: 10  PQNKPAKSANLLYNPTFRSIVFQVIAVLALGLFFYTIVNNALNNLAARGIATGFDFLNQE 69

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF I   ++ Y    SY     VG +NT  ++  G++ AT++G ++G  RLS+N LV+ 
Sbjct: 70  AGFGIGLTLIEYDETFSYGRTFFVGLLNTALVSVLGIVLATVLGFVIGIARLSSNWLVSR 129

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              VY+E+FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP       +
Sbjct: 130 FAAVYIEIFRNIPLLLQIFFWYFAVLQALPSARQSMSLGEAIFLNVRGLYFPAPVFGEGS 189

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            + + +F+LGI+ ++     +++  + TG+  P+  I   LI  LP +V   +   +  +
Sbjct: 190 SVVIGAFILGIIATIIINIWAKNKQKLTGQQTPMFRIGLGLIVVLPVVVFFVMGMPITAE 249

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PVL  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL  
Sbjct: 250 YPVLKGFNFKGGISIIPELAALTLALSIYTASFIAEIVRSGINAVNHGQTEAAMSLGLPK 309

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEI 366
            +  +LV++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQ GQAIEI
Sbjct: 310 SRTLKLVVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQVGQAIEI 369

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 370 IAMTMAVYLTLSLVTSALMNLYNKKVALVER 400


>gi|170720091|ref|YP_001747779.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169758094|gb|ACA71410.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 392

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 164/380 (43%), Positives = 230/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LSDPRVRAWLFQILTIIFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI      F++NRGL+ P  TM      FV + VL I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINFDDAFFISNRGLNMPGATMAEGFWPFVAAVVLAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +   R +     +TG+     +    L+  +P L  +     +H++ P L  FNF+G
Sbjct: 193 VAIMAMVRYANKRFNETGEPFHKFWAGLALLVVIPGLCALLFGSPVHWEVPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|148549629|ref|YP_001269731.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148513687|gb|ABQ80547.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 392

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 159/380 (41%), Positives = 231/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     Q++  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LNDPRVRAWLFQVLTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N +++ +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMISKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  +M      FV +  + I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIDDMFFISNRGLNMPGASMADGFWPFVVALAVAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +   R +    ++TG      ++   L   +P L ++     + ++ P L  FNF+G
Sbjct: 193 VAIVLMVRFANKRFDETGVPFHKFWVGLALFIAIPGLSVLLFGSPVSWEVPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|311695086|gb|ADP97959.1| amino acid ABC transporter, permease protein [marine bacterium
           HP15]
          Length = 395

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 173/394 (43%), Positives = 242/394 (61%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            ++T+    +  K  YD RV ++  Q +   L+       V+N  +NME   +S G GFL
Sbjct: 2   KKQTIDTRPAGPKPWYDPRVRSLFFQAVAIALVFWGGWILVDNTLSNMESRGISTGFGFL 61

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            E AGF I   +VPY +  SY     VG  NT  ++  G++ ATI+G ++G  RLS+N L
Sbjct: 62  GETAGFGIIMNLVPYDATMSYGRTFWVGLTNTLLVSAMGVVAATILGFIIGVARLSSNWL 121

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           VA +  VY+EV RNIP L+ IFF Y +VLS LP P  S+ +   +FLNNRGL  P     
Sbjct: 122 VAKMALVYIEVIRNIPLLLQIFFWYFAVLSNLPSPRQSVDVGGALFLNNRGLYLPDPVTQ 181

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I     +L I   +     ++     TG+  P   +   ++  +P +  +     L
Sbjct: 182 EGFGIVWGGILLAIAAVVGIRIWAKKRQLATGQIFPTFKVGVAILVLVPIISYLVAGRPL 241

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +D P L  FNF GG T+ PE  +L+IALS YTA+FIAEIVRSG+++V +GQ EA+ ALG
Sbjct: 242 EWDLPALRGFNFGGGITIIPELAALWIALSLYTASFIAEIVRSGILSVSKGQTEASKALG 301

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L +    RLV++PQAMR IIPPLTSQYLNL+KNSSLA A+G+ DLV+V  GT +NQTGQA
Sbjct: 302 LPNGLTLRLVVIPQAMRVIIPPLTSQYLNLVKNSSLATAIGYPDLVAVFMGTTLNQTGQA 361

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E++ I M +YL++S++I+LFMN  N  +A+KE+
Sbjct: 362 VEVVAITMAVYLTISLLISLFMNIYNRAVAIKER 395


>gi|312881586|ref|ZP_07741364.1| amino acid ABC transporter, permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309370649|gb|EFP98123.1| amino acid ABC transporter, permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 400

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 170/392 (43%), Positives = 243/392 (61%), Gaps = 1/392 (0%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
           +      S+    Y+    ++  QI+    L   F   VNN  +N+E   ++ G  FLS+
Sbjct: 9   EPRNMATSKTNIFYNPTFRSVVFQILAVAGLAFFFYTIVNNALSNLEARGIATGFDFLSQ 68

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF I   ++ Y    SY    +VG +NT  ++F G+I ATI+G ++G  RLS N LV+
Sbjct: 69  EAGFGIGLTLIEYDETYSYGRTFIVGLLNTALVSFFGIILATIVGFIMGIARLSTNWLVS 128

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
               VY+E+FRN+P L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    +T 
Sbjct: 129 RFAAVYIEIFRNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPIFETG 188

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A I + SFV+GI++++  +  +++  + TG+  P+  I+      +P +    +   +  
Sbjct: 189 ASIVIGSFVVGIIVTILVSVWAKNKQQLTGQQTPMGKITLLFCVVIPVVCYFVMGSPISA 248

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P L  FNF GG ++ PE  +L IALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL 
Sbjct: 249 EMPELRGFNFEGGISIIPELAALLIALSIYTASFIAEIVRSGINAVSHGQTEAAMSLGLP 308

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
             +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIE
Sbjct: 309 RSRTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIE 368

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 369 IIAMTMGVYLTLSLLTSALMNIYNRKVALVER 400


>gi|26988033|ref|NP_743458.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982753|gb|AAN66922.1|AE016320_10 general amino acid ABC transporter, permease protein [Pseudomonas
           putida KT2440]
          Length = 392

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 160/380 (42%), Positives = 227/380 (59%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LNDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  ++      FV +  L I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIEDMFFISNRGLNMPGASIADGFWPFVVALALAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R +     +TG      +    L   +P+L ++     + +D P L  FNF+G
Sbjct: 193 AAIALMVRYANKRFNETGVPFHKFWAGLLLFIAIPSLSVLLFGSPVTWDMPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|238794643|ref|ZP_04638249.1| amino-acid ABC transporter permease protein yhdX [Yersinia
           intermedia ATCC 29909]
 gi|238726032|gb|EEQ17580.1| amino-acid ABC transporter permease protein yhdX [Yersinia
           intermedia ATCC 29909]
          Length = 392

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 160/395 (40%), Positives = 227/395 (57%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     +  +N   N+    ++ G  F
Sbjct: 2   SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLFHNTITNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y    LVG +NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLLNTLLVSVLCIFFASILGFCLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S+      FL+NRGL  P+   
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLDAFGVAFLSNRGLYLPSPEF 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + +L ++++L   R +      TG+      I   L+  LP +  +     
Sbjct: 178 AAGFIPALLAVLLAVIITLALYRYNHFRQLHTGQFHRTWPIGLLLLIALPAVAHLLYGSA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 LHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 ALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 358 AIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392


>gi|15965230|ref|NP_385583.1| general L-amino acid transport permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|15074410|emb|CAC46056.1| Probable general L-amino acid transport permease ABC transporter
           [Sinorhizobium meliloti 1021]
          Length = 397

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 201/397 (50%), Positives = 273/397 (68%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M         R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G
Sbjct: 1   MAIGVTNAPERSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  RAGF++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG +VG GRLS
Sbjct: 61  YDFVRSRAGFDVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N ++A +   YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP 
Sbjct: 121 HNWIIAKLSLAYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPR 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              +  A+  + +FV+ +  S+F  R +R     TG+ LP+L+    LI GLP +  +  
Sbjct: 181 PIAEEGAEYTLLAFVIAVAASVFFARYARKRQLATGERLPVLWTVLGLIIGLPLVTFLVT 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              + FD PV G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA
Sbjct: 241 GAPITFDIPVAGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+     TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQT
Sbjct: 301 HALGIRPALTTRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQ+IEI+ IW+ +YLSLS+  +LFMN  NA++AL E+
Sbjct: 361 GQSIEIVSIWLIVYLSLSLATSLFMNWYNARMALVER 397


>gi|167035542|ref|YP_001670773.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862030|gb|ABZ00438.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 392

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 159/380 (41%), Positives = 229/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LNDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  +M      F  + V+ I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIDDMFFISNRGLNMPGASMADGFWPFAVAVVVAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R++    ++TG      +    L+  +P L ++     + ++ P L  FNF+G
Sbjct: 193 AAIAVMVRMANKRFDETGVPFHKFWAGLALLIAIPGLSVLLFGSPVTWEVPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|307309253|ref|ZP_07588921.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306900254|gb|EFN30871.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 397

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 201/397 (50%), Positives = 272/397 (68%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M         R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G
Sbjct: 1   MAIGVTNAPERSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  RAGF++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG +VG GRLS
Sbjct: 61  YDFVRSRAGFDVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N ++A +   YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP 
Sbjct: 121 HNWIIAKLSLAYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPR 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              +  A+    +FV+ +  S+F  R +R     TG+ LP+L+    LI GLP +  +  
Sbjct: 181 PIAEEGAEYTPLAFVIAVAASVFFARYARKRQLATGERLPVLWTVLGLIIGLPLVTFLVT 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              + FD PV G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA
Sbjct: 241 GAPITFDIPVAGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+     TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQT
Sbjct: 301 HALGIRPALTTRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQ+IEI+ IW+ +YLSLS+  +LFMN  NA++AL E+
Sbjct: 361 GQSIEIVSIWLIVYLSLSLATSLFMNWYNARMALVER 397


>gi|328543625|ref|YP_004303734.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
 gi|326413369|gb|ADZ70432.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 395

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 172/393 (43%), Positives = 239/393 (60%), Gaps = 9/393 (2%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           +R   + D +V  +  Q++L  +L  +    V+N  +N+ + N++ G GFL   AGF I 
Sbjct: 3   ARASLVNDPKVRGLFYQVLLIAVLVFVGWSIVSNTIDNLARQNIASGFGFLGNTAGFGII 62

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +VPY   SSY  A++VGF NT  +A  G++ AT++G +VG  RLS N +++ +   YV
Sbjct: 63  QALVPYAETSSYGQALVVGFFNTLLVAVIGIVFATVLGFVVGIARLSNNWVISRLAYAYV 122

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF-GMFLNNRGLSFPTLTMDTNAKIFVF 192
           E+ RNIP L+ IFF Y +VL  +P         F  + LN  GL  P   ++  +     
Sbjct: 123 ELIRNIPLLLQIFFWYFAVLRAVPDKRDRWSFLFDTVHLNIAGLWLPRPELEPGSSAVGV 182

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL- 251
           + ++G+  ++     +R   E TGK  P++  +  LI GLP +V +A    LH   PV  
Sbjct: 183 ALLVGVAAAIAMRIWARRRQEATGKQFPVILTALGLIVGLPLVVFLAAGMPLHLSHPVFV 242

Query: 252 -------GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F    G  + PE ++L +ALS YTA+FIAEIVR+G+ AV  GQ EAA ALG
Sbjct: 243 EEGPILRRGFTLGSGMNLIPELLALTLALSIYTASFIAEIVRAGIQAVSHGQTEAAHALG 302

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +  RLV++PQAMR IIPPLTSQ+LNL KNSSLAVAV F DLVSVGG ++NQTGQAI
Sbjct: 303 LRNGQTLRLVVIPQAMRVIIPPLTSQFLNLTKNSSLAVAVAFPDLVSVGGIVLNQTGQAI 362

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           EII IWM +YLSLS+  + FMN  N ++AL E+
Sbjct: 363 EIIAIWMIVYLSLSLATSAFMNWYNRRMALVER 395


>gi|59712140|ref|YP_204916.1| amino-acid transporter permease [Vibrio fischeri ES114]
 gi|59480241|gb|AAW86028.1| predicted amino-acid transporter permease [Vibrio fischeri ES114]
          Length = 388

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 175/385 (45%), Positives = 241/385 (62%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
                LY+     I  Q+I    L   F   VNN  +N+E   ++ G+GFL + AGF I 
Sbjct: 4   KNKNILYNPTFRAILFQVIAVAALVFFFYTIVNNALSNLESRGIATGLGFLDQEAGFGIG 63

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             +V Y    SY    +VG +NT  ++  G++ AT++G  +G  RLS+N LV+    VY+
Sbjct: 64  LSLVEYDETYSYGRTFVVGLLNTALVSVLGILFATVLGFTIGIARLSSNWLVSRCAAVYI 123

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP+   +  + +   +
Sbjct: 124 ETFRNIPLLLQIFFWYFAVLQALPSPRQSLSLGESVFLNVRGLFFPSPIFEEGSNLIGIA 183

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F+  IV  LF ++ +++    TG+  P+L  S   +FGLPTL        +  + P L  
Sbjct: 184 FIAAIVFILFLSKWAKNKQRITGQQTPVLRYSLLALFGLPTLAYFISGMPISIEYPELKG 243

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA+ALGL  ++  +L
Sbjct: 244 FNFRGGISIIPELAALVVALSVYTASFIAEIVRSGINAVSHGQTEAAMALGLPRKRTLKL 303

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 304 VVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMA 363

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +  MN  N+K+AL E+
Sbjct: 364 VYLTLSLLTSFLMNIYNSKVALVER 388


>gi|307316995|ref|ZP_07596436.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306897083|gb|EFN27828.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 397

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 201/397 (50%), Positives = 273/397 (68%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M         R  S    + D +V  I  Q I  ++L  +  W V+N  +N+ ++N++ G
Sbjct: 1   MAIGVTNAPERSRSSGSIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  RAGF++ Q ++ +TSDS+Y  A+LVGF+NT  +A +G+I ATIIG +VG GRLS
Sbjct: 61  YDFVRSRAGFDVGQSLISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N ++A +   YVEVFRNIPPL+VIFF Y  VLS+LP    ++ LPF +FL+NRG++FP 
Sbjct: 121 HNWIIAKLSLAYVEVFRNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPR 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              +  A+  + +FV+ +  S+F  R +R     TG+ LP+L+    LI GLP +  +  
Sbjct: 181 PIAEEGAEYTLLAFVIAVAASVFFARYARQRQLATGERLPVLWTVLGLIIGLPLVTFLVT 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              + FD PV G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  V +GQ EAA
Sbjct: 241 GAPITFDIPVAGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+     TRLV++PQAMR IIPPLTSQYLNL KNSSLAVA+G+ADLV+VGGTI+NQT
Sbjct: 301 HALGIRPALTTRLVVVPQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAVGGTILNQT 360

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQ+IEI+ IW+ +YLSLS+  +LFMN  NA++AL E+
Sbjct: 361 GQSIEIVSIWLIVYLSLSLATSLFMNWYNARMALVER 397


>gi|323189119|gb|EFZ74403.1| general L-amino acid transport system permease protein aapQ
           [Escherichia coli RN587/1]
          Length = 393

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 156/378 (41%), Positives = 227/378 (60%), Gaps = 1/378 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+       +  LI GLP L        L +D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALLWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 315

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPPL SQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+
Sbjct: 316 RVIIPPLASQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISL 375

Query: 380 MIALFMNRLNAKIALKEK 397
            I+L MN  N +IA+ E+
Sbjct: 376 TISLLMNIYNRRIAIVER 393


>gi|126668364|ref|ZP_01739322.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17]
 gi|126627180|gb|EAZ97819.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17]
          Length = 396

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 172/395 (43%), Positives = 243/395 (61%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           N         SR K   + +V     Q +    +        +N  +NME   +S G GF
Sbjct: 2   NESNMTPSNGSRPKPWNNPKVRMFVFQTLALATVFWFGWTLFHNTLSNMESRGISTGFGF 61

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E +GF I   ++PY S  +Y     VG +NT  ++  G++ ATIIG +VG  RLS+N 
Sbjct: 62  LDETSGFGIIMSLIPYDSTMTYGRTFFVGLLNTLLVSAMGVVAATIIGFVVGVARLSSNW 121

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+A +  VY+E  RNIP L+ IFF Y +VL  LP P  S+ +    FL+NRGL FPT + 
Sbjct: 122 LIAKLALVYIETIRNIPLLLQIFFWYFAVLQTLPSPRQSLDVADMFFLSNRGLYFPTASA 181

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +      + + ++G+  ++F  R ++    +TG+  P L +   LI  LP L+ + +   
Sbjct: 182 EPGFGWVMAALIVGVAAAVFVHRWAKKRQFRTGQLFPALRVGAVLILALPLLMFVLVGRP 241

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L ++ P L  FNF GG+++ PE  +L+IALS YTA+FIAEIVRSG++AV RGQ EAA AL
Sbjct: 242 LVWEMPSLTGFNFTGGASILPELAALWIALSLYTASFIAEIVRSGILAVNRGQTEAASAL 301

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL      RLV++PQAMR IIPPLTSQYLNL+KNSSLA A+ + DLVSV  GT +NQTGQ
Sbjct: 302 GLRSSFTLRLVVIPQAMRVIIPPLTSQYLNLVKNSSLATAIAYPDLVSVFMGTTLNQTGQ 361

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+E++ I M +YL++S++I+  MN  N  +AL+E+
Sbjct: 362 AVEVVAITMAVYLTISLIISGLMNIYNRAVALQER 396


>gi|330862828|emb|CBX72969.1| putative amino-acid ABC transporter permease protein yhdX [Yersinia
           enterocolitica W22703]
          Length = 400

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 158/395 (40%), Positives = 221/395 (55%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  +     QII  L+L     +  +N   N+    ++ G  F
Sbjct: 10  SQRPTVKGAFS----LTNPALRAWLYQIIALLILLGCGAYLFHNTITNLSTRGITSGFAF 65

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y    LVG  NT  ++   +  A+I+G  +G   LS N 
Sbjct: 66  LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLFNTLLVSVLCIFFASILGFFLGLAHLSDNW 125

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S       FL+NRGL  P+   
Sbjct: 126 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSQDAFGVAFLSNRGLYLPSPEF 185

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + +L ++  +   R +      TG+      I   L+  LP L        
Sbjct: 186 AAGFVPALIAVLLAVIAIIALHRYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPA 245

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 246 LHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSL 305

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 306 ALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 365

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 366 AIETIAITMSVYLVISLSISFLMNLYNRRIALVER 400


>gi|313500473|gb|ADR61839.1| AapQ [Pseudomonas putida BIRD-1]
          Length = 392

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 161/380 (42%), Positives = 227/380 (59%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LNDPRVRAWLFQILTIVFVIGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI +    F++NRGL+ P  +M      FV +  L I
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINIQDMFFISNRGLNMPGASMADGFWPFVVALALAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R +     +TG      +    L   +P+L ++     + +D P L  FNF+G
Sbjct: 193 AAIAVMVRYANKRFNETGVPFHKFWAGLLLFIAIPSLSVLLFGSPVTWDMPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|156935789|ref|YP_001439705.1| hypothetical protein ESA_03660 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534043|gb|ABU78869.1| hypothetical protein ESA_03660 [Cronobacter sakazakii ATCC BAA-894]
          Length = 393

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 160/380 (42%), Positives = 225/380 (59%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L    V     QI+   ++  I  + ++N   N+    ++ G  FL   AGF I Q ++ 
Sbjct: 14  LSSPAVRAWLYQIVAIAVVLGIAAYLIHNTITNLNNRGITSGFAFLDRSAGFGIVQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y    LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  +Y+E FRN
Sbjct: 74  YQEGDTYGRVFLVGLMNTLLVSTLCIVFASFLGFFIGLARLSDNWLLRKLSTIYIETFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P+      A  FV + V+ +
Sbjct: 134 IPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYLPSPEAGEGALAFVAALVIAL 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            LS    R ++    KTG+          LI  LP L  +     L +D PVL  FNF G
Sbjct: 194 ALSAGLYRFNKKHQMKTGQLRRTWPSLLLLIVVLPLLAHLIFGPALRWDVPVLRGFNFRG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE  +L +ALS YT+AFIAEI+R+G+++VP GQ EAA +LGL +    R V++PQ
Sbjct: 254 GLALIPELAALTLALSVYTSAFIAEIIRAGILSVPHGQHEAARSLGLPNPVTLRQVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           AMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +
Sbjct: 314 AMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLII 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ I+L MN  N +IAL E+
Sbjct: 374 SLSISLLMNLYNQRIALVER 393


>gi|149376723|ref|ZP_01894481.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
 gi|149358962|gb|EDM47428.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
          Length = 395

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 170/394 (43%), Positives = 237/394 (60%), Gaps = 1/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            ++T     +  K  YD RV  I  Q++   L+       ++N  +NME   +S G GFL
Sbjct: 2   KKQTFDSKPAGPKPWYDPRVRAIFFQVVAIALVFWGGWVLIDNTLSNMESRGISTGFGFL 61

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            E AGF I   +VPY +  SY     VG  NT  ++  G++ ATI+G ++G  RLS+N L
Sbjct: 62  DESAGFGIIMSLVPYDATMSYGRTFWVGLTNTLLVSAMGVVTATILGFIIGVARLSSNWL 121

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           VA +   Y+EV RNIP L+ IFF Y +VLS LP P  S+ +    FLNNRGL  P     
Sbjct: 122 VAKVSLAYIEVIRNIPLLLQIFFWYFAVLSSLPSPRQSVDVGGAFFLNNRGLYVPEPVTQ 181

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +     +  I   +     ++     TG   P   +   ++F +P +        L
Sbjct: 182 DGFGLVWGGILAAIAAVIGIRIWAKRRQLATGAIFPTFKVGVGILFLVPIMSYFLAGQPL 241

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +D P L  FNF GG ++ PE  +L+IALS YTA+FIAEIVRSG+++V +GQ EA+ ALG
Sbjct: 242 EWDLPALKGFNFGGGISIIPELAALWIALSLYTASFIAEIVRSGILSVSKGQTEASKALG 301

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L +    RLV++PQAMR IIPPLTSQYLNL+KNSSLA A+G+ DLV+V  GT +NQTGQA
Sbjct: 302 LPNGLTLRLVVIPQAMRVIIPPLTSQYLNLVKNSSLATAIGYPDLVAVFMGTTLNQTGQA 361

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E++ I M +YL++S++I+LFMN  N  +A+KE+
Sbjct: 362 VEVVAITMAVYLTISLLISLFMNIYNRAVAIKER 395


>gi|126464336|ref|YP_001045449.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126106147|gb|ABN78677.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 398

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 151/387 (39%), Positives = 238/387 (61%), Gaps = 1/387 (0%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              S    LY      +  QI LA  + ++  +   NV  N+ + N++ G GFL + + F
Sbjct: 13  PRRSPKDILYSESFRTVVYQIALAAAVALLGFYLYQNVVENLARQNIATGFGFLGQVSQF 72

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           EI + ++ Y++  +Y  A+ VG +NT  ++ +G++ AT+IG  VG  R+S+N L+  +  
Sbjct: 73  EIGETLIAYSARDTYGRALAVGLMNTLSVSAAGIVVATVIGFSVGIARVSSNWLLQRLAT 132

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVE+ RNIP ++ + F   +V+  LP P  ++ L    FL+NRGL+F   +        
Sbjct: 133 AYVEIVRNIPVILQVIFWA-AVIRNLPAPRQAVELWGMGFLSNRGLTFAMPSAHAAHLWM 191

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + + V GI L++ A+  ++   E TG+ + +L+    LI GLP LV +          P 
Sbjct: 192 LAALVAGIALAILASHKAKRHREATGRYIDMLWPCVGLIVGLPLLVWLGFGAPHEISFPE 251

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FNF GG+T+SPEF++L   +S Y++ FIAEIVR+G+ A PRGQ+EAA ++ L  R  
Sbjct: 252 RRGFNFAGGATISPEFVALMTGISLYSSGFIAEIVRAGIQATPRGQVEAARSIALRPRFI 311

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+R I+PPLTSQY++L+KNSS+AV +G+ DLV++G T++NQTGQA+E I + 
Sbjct: 312 LRYVVLPQALRVIVPPLTSQYVSLIKNSSIAVVIGYPDLVNIGNTVMNQTGQAVEAIAVM 371

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M +YL +S++ +L MN  N  +A+KE+
Sbjct: 372 MLVYLIVSLVTSLLMNFYNRLVAIKER 398


>gi|261252933|ref|ZP_05945506.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260936324|gb|EEX92313.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 400

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 169/396 (42%), Positives = 240/396 (60%), Gaps = 1/396 (0%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
             A             +Y+     +  QII    L   F   VNN   N+E   ++ G  
Sbjct: 5   NAASSADNGPAKNANLIYNPTFRAVVFQIIAIAALVFFFYTIVNNALTNLEARGIATGFD 64

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I   ++ Y    SY    ++G +NT  ++F G+I AT+IG ++G  RLS+N
Sbjct: 65  FLDQEAGFGIGLTLIEYDETYSYGRTFVIGLLNTALVSFFGIILATVIGFIMGIARLSSN 124

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            LV+ +  VY+E+FRN+P L+ IFF Y +VL  LP    S+ L   +FLN RGL FP   
Sbjct: 125 WLVSRLAAVYIEIFRNVPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPI 184

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +  + I V +FV+G++ S+     +++  + TG+  P+  I+  L   LP +V   +  
Sbjct: 185 FEQGSSIVVATFVIGLIASIVIGIWAKNKQKLTGQQTPMGRIALGLCVVLPVIVYFLMGS 244

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 245 PISAELPELKGFNFRGGISIIPELAALLLALSIYTASFIAEIVRSGINAVNHGQTEAAMS 304

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL   +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTG
Sbjct: 305 LGLPRSRTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTG 364

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QAIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 365 QAIEIIAMTMGVYLTLSLLTSALMNIYNRKVALVER 400


>gi|227327915|ref|ZP_03831939.1| L-amino acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 392

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 162/394 (41%), Positives = 235/394 (59%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QI++ + +  +  + ++N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKGDLS----LTNPAVRAWLYQIVVVIAVLAVAAYLLHNTVTNLAQRGITSGFDFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I Q ++ Y    +YA   +VG  NT  ++   ++ A+I+G  VG  RLS N L
Sbjct: 59  NKSAGFGIVQHLIDYQQGDTYARVFVVGLFNTLLVSALCIVFASILGFTVGLARLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  +Y+E+FRNIPPL+ IFF Y +VL  LP P  SI      FL+NRG   P+  + 
Sbjct: 119 LRKISNIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQSISAFDVAFLSNRGFYLPSPELG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A  F  S ++  +++    R ++ +H  TG+      ++  L   L TL  +      
Sbjct: 179 PGAAAFFLSLLITAIVTWVVFRRNKRYHALTGQPRRTWPLTLGLFLVLCTLSHLIFGPAF 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H+D P L  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA +LG
Sbjct: 239 HWDMPELKGFNFRGGMVLIPELAALTVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLLMNLYNRKIALVER 392


>gi|220914745|ref|YP_002490053.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219952496|gb|ACL62886.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 403

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 160/394 (40%), Positives = 231/394 (58%), Gaps = 2/394 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
                           D R  NI  Q+++   +T +  + ++N   N+E+  ++ G  FL
Sbjct: 11  HPVRAAPRKKLNFSWSDPRFRNIVWQVVILSAVTAVAWFLISNTNRNLEQRRIATGFAFL 70

Query: 65  SERAGFEIDQGIVPYTSD-SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           S  AG  I + ++ Y    S+Y  A+L+G +NT  +A  G++ AT+ GTL+G  RLS N 
Sbjct: 71  SRTAGIPIGEHLIDYDPAVSTYGRALLIGVLNTLKVAVVGVVLATLWGTLLGIARLSRNW 130

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           LV+ +  VYVE+ R++P L+ + F Y   L  LP P  S     G+FL+NRG+  P +  
Sbjct: 131 LVSKLAAVYVEIIRDVPLLLQLLFWYSI-LQALPAPRQSFHPVPGVFLSNRGVKIPFVEW 189

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           D      + +  +G V +   +R +    E+ G    +  ++  L+ G P  V   L   
Sbjct: 190 DEPYWWALLALTVGAVGTWAWSRAATRRQERIGTRPKVWPMAILLMVGFPVAVWAGLGAP 249

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              D P L  F+F GG T+SPE+ +L + L  YTAAFIAEIVRSG++AVP GQ EAA AL
Sbjct: 250 FVADVPELRGFDFNGGGTISPEYGALTMGLVIYTAAFIAEIVRSGILAVPTGQWEAAAAL 309

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      R ++LPQA+R IIPP+TSQYLNL+KNSSLAVA+G+ D+VS+  T +NQTGQA
Sbjct: 310 GVRRGIILRKIVLPQALRVIIPPMTSQYLNLIKNSSLAVAIGYQDIVSIANTTLNQTGQA 369

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I + M +YL +S+ I+LFMN  N +IAL E+
Sbjct: 370 IEGIAMVMLVYLVISLSISLFMNWYNGRIALVER 403


>gi|325275055|ref|ZP_08141043.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324099818|gb|EGB97676.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 392

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 160/380 (42%), Positives = 230/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QI+  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++P
Sbjct: 13  LSDPRVRAWLFQILTIVFVVGLGWYLFHNTQTNLQHRGITSGFDFLDRSAGFGIAQHLIP 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    SYA   ++G +NT  + F G+I ATI+G ++G  RLS N ++  +  VYVE FRN
Sbjct: 73  YVESDSYARVFVIGLLNTLLVTFIGVILATILGFIIGVARLSPNWMINKLATVYVETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   LP P  SI L    F++NRGL+ P  +M      FV +  + +
Sbjct: 133 IPPLLQILFWYFAVFLTLPGPRGSINLNDLFFISNRGLNMPGASMADGFWPFVAALAVAV 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  RL+    ++TG      + +  L+  +P L ++     + ++ P L  FNF+G
Sbjct: 193 GAVWLMVRLANKRFDETGVPFHKFWAALALLLVIPGLSVLLFGCPVTWEAPQLKGFNFVG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQ
Sbjct: 253 GWVLIPELLALTLALTIYTAAFIAEIVRSGIRSVSHGQTEAARSLGLREGPTLRKVIIPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 313 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 373 SISISLLMNWYNKRIALIER 392


>gi|77457201|ref|YP_346706.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77381204|gb|ABA72717.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 393

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 164/380 (43%), Positives = 232/380 (61%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L D RV     QII  + +  +  +  +N   N++   ++ G  FL   AGF I Q ++ 
Sbjct: 14  LSDPRVRAWVFQIITIVAVVSLGWYLFDNTQTNLQHRGITSGFDFLERSAGFGIAQHLIS 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT   SYA   ++G +NT  + F G+I ATI+G +VG  RLS N +++ +  VYVEVFRN
Sbjct: 74  YTEADSYARVFVIGLLNTLLVTFIGVILATILGFIVGVARLSKNWIISKLATVYVEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ I F Y +V   +P P +S       F+++RGL+ P   M      FV S V+ I
Sbjct: 134 IPPLLQILFWYFAVFLTMPGPRNSHNFGDTFFVSSRGLNMPAAQMADGFWAFVVSIVVAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  +  +R +    E TG+     +    L   +P L  +     +H++ P L  FNF+G
Sbjct: 194 VAIVLMSRWANKRFEATGEPFHKFWAGLALFLVIPALCALIFGAPVHWEMPKLQGFNFVG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL +    R V++PQ
Sbjct: 254 GWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAAHSLGLRNGPTLRKVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLNL KNSSLA  +G+ ++VS+  GT++NQTGQAIE+I I M +YL++
Sbjct: 314 ALRVIIPPLTSQYLNLAKNSSLAAGIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           SI I+L MN  N +IAL E+
Sbjct: 374 SISISLLMNWYNKRIALIER 393


>gi|221370066|ref|YP_002521162.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221163118|gb|ACM04089.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 398

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 151/387 (39%), Positives = 238/387 (61%), Gaps = 1/387 (0%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              S    LY      +  QI LA  + ++  +   NV  N+ + N++ G GFL + + F
Sbjct: 13  PRRSPKDILYSESFRTVVYQIALAAAVALLGFYLYQNVVENLARQNIATGFGFLGQVSQF 72

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           EI + ++ Y++  +Y  A+ VG +NT  ++ +G++ AT+IG  VG  R+S+N L+  +  
Sbjct: 73  EIGETLIAYSARDTYGRALAVGLMNTLSVSAAGIVVATVIGFSVGIARVSSNWLLQRLAT 132

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVE+ RNIP ++ + F   +V+  LP P  ++ L    FL+NRGL+F   +        
Sbjct: 133 AYVEIVRNIPVILQVIFWA-AVIRNLPAPRQAVELWGLGFLSNRGLTFAMPSAHAAHLWM 191

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + + V GI L++ A+  ++   E TG+ + +L+    LI GLP LV +          P 
Sbjct: 192 LAALVAGIALAILASHKAKRHREATGRYIDMLWPCVGLIVGLPLLVWLGFGAPHEISFPE 251

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              FNF GG+T+SPEF++L   +S Y++ FIAEIVR+G+ A PRGQ+EAA ++ L  R  
Sbjct: 252 RRGFNFAGGATISPEFVALMTGISLYSSGFIAEIVRAGIQATPRGQVEAARSIALRPRFI 311

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+R I+PPLTSQY++L+KNSS+AV +G+ DLV++G T++NQTGQA+E I + 
Sbjct: 312 LRYVVLPQALRVIVPPLTSQYVSLIKNSSIAVVIGYPDLVNIGNTVMNQTGQAVEAIAVM 371

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M +YL +S++ +L MN  N  +A+KE+
Sbjct: 372 MLVYLIVSLVTSLLMNFYNRLVAIKER 398


>gi|283788088|ref|YP_003367953.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
 gi|282951542|emb|CBG91241.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
          Length = 393

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 158/377 (41%), Positives = 227/377 (60%), Gaps = 1/377 (0%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
             V     QI+  + +  + ++ ++N  +N+    ++ G  FL   AGF I Q ++ Y  
Sbjct: 17  PAVRAWLFQILAIIAVAAVAIYLIHNTIDNLSNRGITSGFAFLERSAGFGIVQHLIDYQQ 76

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    LVG  NT  ++   ++ A+ +G  +G  RLS N L+  +  VY+E+FRNIPP
Sbjct: 77  GDTYGRVFLVGLSNTLLVSALCIVFASALGFFLGLARLSDNWLLRKLSTVYIEIFRNIPP 136

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ IFF Y +VL  LP P  ++     +FL+NRGL  P+         FV S ++ I +S
Sbjct: 137 LLQIFFWYFAVLRNLPGPRQAVSALDMVFLSNRGLYIPSPQTGEGLLAFVLSLIIAITIS 196

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +   R +R    KTG+      ++  L+  LP L        LH+D P L  FNF GG  
Sbjct: 197 VVLFRYNRMHQTKTGQLRKTWPVAAVLLIALPLLAHWLSGPALHWDMPELKGFNFRGGMV 256

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL H    R V++PQA+R
Sbjct: 257 LIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPHAVTLRQVIIPQALR 316

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ 
Sbjct: 317 VIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLLISLS 376

Query: 381 IALFMNRLNAKIALKEK 397
           I+L MN  N ++AL E+
Sbjct: 377 ISLLMNIYNRRMALVER 393


>gi|260596109|ref|YP_003208680.1| putative amino-acid ABC transporter permease yhdX [Cronobacter
           turicensis z3032]
 gi|260215286|emb|CBA27217.1| Putative amino-acid ABC transporter permease protein yhdX
           [Cronobacter turicensis z3032]
          Length = 393

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 161/380 (42%), Positives = 225/380 (59%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L    V     QI+   ++  I  + ++N   N+    ++ G  FL   AGF I Q ++ 
Sbjct: 14  LSSPAVRAWLYQIVAIAVVLGIAAYLIHNTITNLNSRGITSGFAFLDRSAGFGIVQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y    LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  VY+E FRN
Sbjct: 74  YQEGDTYGRVFLVGLMNTLLVSALCIVFASFLGFFIGLARLSDNWLLRKLSTVYIETFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P+      A  FV + V+ +
Sbjct: 134 IPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYLPSPEAGEGALAFVAALVIAL 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            LS    R ++    KTG+          LI  LP L  +A    L +D P L  FNF G
Sbjct: 194 TLSAGLYRFNKKHQMKTGQLRRTWPTLLLLIIVLPLLAHLAFGPALRWDVPALRGFNFRG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE  +L +ALS YT+AFIAEI+R+G+++VP GQ EAA +LGL +    R V++PQ
Sbjct: 254 GLALIPELAALTLALSVYTSAFIAEIIRAGILSVPYGQHEAARSLGLPNPVTLRQVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           AMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +
Sbjct: 314 AMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLII 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ I+L MN  N +IAL E+
Sbjct: 374 SLSISLLMNLYNRRIALVER 393


>gi|332163169|ref|YP_004299746.1| putative ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667399|gb|ADZ44043.1| putative ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 392

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 222/395 (56%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  +     QII  L+L     +  +N   N+    ++ G  F
Sbjct: 2   SQRPTVKGAFS----LTNPALRAWLYQIIALLILLGCGAYLFHNTITNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y    LVG  NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLFNTLLVSVLCIFFASILGFFLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S       FL+NRGL  P+   
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSQDAFGVAFLSNRGLYLPSPEF 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + +L ++  +   R +      TG+      I   L+  LP L        
Sbjct: 178 AAGFVPALIAVLLAVIAIIALHRYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 LHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 ALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 358 AIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392


>gi|89092423|ref|ZP_01165377.1| general L-amino acid transport system permease protein AapQ
           [Oceanospirillum sp. MED92]
 gi|89083511|gb|EAR62729.1| general L-amino acid transport system permease protein AapQ
           [Oceanospirillum sp. MED92]
          Length = 393

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 160/389 (41%), Positives = 236/389 (60%), Gaps = 1/389 (0%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
            +  S   F  + R  +I  Q++L   L   F   ++N   NME   +  G  FL   AG
Sbjct: 5   PQVKSSPSFFNNPRNRSIIYQLLLLFGLGYFFYSIISNTLANMEARGIQSGYDFLFNTAG 64

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+I   ++PY + ++Y    +VG +NT  ++  G+I +TI+G ++G    S N L+  + 
Sbjct: 65  FDILMSLIPYDATNTYGRTFIVGLLNTVLVSIIGIILSTIVGFIMGVAHFSHNLLIRKLA 124

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             YVE FRNIP L+ IFF Y +VL+ LP    S+ L   +FLN RGL FP LT +  A +
Sbjct: 125 TAYVETFRNIPLLLQIFFWYFAVLAALPSARQSMSLGEVIFLNVRGLYFPGLTPEGGASV 184

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
              +    I+      R ++   + TG+  P+L++S  ++FGLP L LI + +   +D P
Sbjct: 185 VYAAIAAAIIGIFVLKRWAKKRQDDTGQQFPVLWVSLGMLFGLPLLALIVMGFPFAWDIP 244

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG TV PE M+L +AL+ YT AFIAE VR+G+ AVP GQ EAA ++GL   K
Sbjct: 245 YLKGFNFRGGVTVIPELMALALALTVYTGAFIAEAVRAGIQAVPHGQTEAARSIGLKEGK 304

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIIL 368
             +L+++PQAMR I+P L S+Y +L+KNS+LA A+G+ DL +V  GT +NQTGQAIEI+ 
Sbjct: 305 IMKLIIVPQAMRVIVPLLNSEYQSLVKNSTLATAIGYPDLFTVFVGTTLNQTGQAIEIVF 364

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M +Y  +++ I+  MNRLN+ +AL E+
Sbjct: 365 MTMAVYFVVNMTISFLMNRLNSSVALTER 393


>gi|330446206|ref|ZP_08309858.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490397|dbj|GAA04355.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 399

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 179/395 (45%), Positives = 247/395 (62%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           +    V+   S+    Y+     +  Q++  + L   F   VNN   N+E   +S G  F
Sbjct: 5   SHTSDVSSPKSKQSIFYNPTFRAVIFQVVAVVGLVFFFYSIVNNALTNLESRGISTGFDF 64

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L++ AGF I   ++ Y    SY    +VG +NT  +A  G+I ATIIG ++G  RLS+N 
Sbjct: 65  LTQEAGFGIGLTLIEYDETYSYGRTFVVGLLNTALVAVLGIILATIIGFIMGVARLSSNW 124

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L++ +  VY+EVFRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGLS P+   
Sbjct: 125 LISRLAAVYIEVFRNIPLLLQIFFWYFAVLQALPSPRQSVSLGEAIFLNVRGLSIPSPIY 184

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            + ++I  +   + +VLS+   R ++   ++TG+ LP+LY    L+ GLP +        
Sbjct: 185 GSGSEIIGWCLAIAVVLSIIFYRYAKKKQQQTGQQLPVLYTVAGLVLGLPLIAFFVTGMP 244

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  + P L  FNF GG T+ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA AL
Sbjct: 245 ITLEYPELKGFNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEAL 304

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL+  K  RLV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQ
Sbjct: 305 GLSKGKTLRLVVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQ 364

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIEII + M +YL+LS++ +L MN  N K+AL E+
Sbjct: 365 AIEIIAMTMAVYLTLSLLTSLLMNIYNKKVALVER 399


>gi|89093225|ref|ZP_01166175.1| general L-amino acid transport system permease protein AapQ
           [Oceanospirillum sp. MED92]
 gi|89082521|gb|EAR61743.1| general L-amino acid transport system permease protein AapQ
           [Oceanospirillum sp. MED92]
          Length = 393

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 159/389 (40%), Positives = 236/389 (60%), Gaps = 1/389 (0%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
            +  S   F  + R  +I  Q++L   L   F   ++N   NME   +  G  FL   AG
Sbjct: 5   PQVKSSPSFFNNPRNRSIIYQLLLLFGLGYFFYSIISNTLANMEARGIQSGYDFLFNTAG 64

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+I   ++PY + ++Y    +VG +NT  ++  G+I +T++G ++G    S N L+  + 
Sbjct: 65  FDILMSLIPYDATNTYGRTFIVGLLNTVLVSIIGIILSTMVGFIMGVAHFSHNLLIRKLA 124

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             YVE FRNIP L+ IFF Y +VL+ LP    S+ L   +FLN RGL FP LT +  A +
Sbjct: 125 TAYVETFRNIPLLLQIFFWYFAVLAALPSARQSMSLGEVIFLNVRGLYFPGLTPEGGASV 184

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
              +    I+      R ++   + TG+  P+L++S  ++FGLP L LI + +   +D P
Sbjct: 185 VYAAIAAAIIGIFVLKRWAKKRQDDTGQQFPVLWVSLGMLFGLPLLALIVMGFPFAWDIP 244

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG TV PE M+L +AL+ YT AFIAE VR+G+ AVP GQ EAA ++GL   K
Sbjct: 245 YLKGFNFRGGITVIPELMALALALTVYTGAFIAEAVRAGIQAVPHGQTEAARSIGLKEGK 304

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIIL 368
             +L+++PQAMR I+P L S+Y +L+KNS+LA A+G+ DL +V  GT +NQTGQAIEI+ 
Sbjct: 305 IMKLIIVPQAMRVIVPLLNSEYQSLVKNSTLATAIGYPDLFTVFVGTTLNQTGQAIEIVF 364

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M +Y  +++ I+  MNRLN+ +AL E+
Sbjct: 365 MTMAVYFVVNMTISFLMNRLNSSVALTER 393


>gi|318603945|emb|CBY25443.1| glutamate aspartate transport system permease protein GltJ
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 392

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 221/395 (55%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
             R TV   FS    L +  +     QII  L+L     +  +N   N+    ++ G  F
Sbjct: 2   PQRPTVKGAFS----LTNPALRAWLYQIIALLILLGCGAYLFHNTITNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y    LVG  NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLFNTLLVSVLCIFFASILGFFLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S       FL+NRGL  P+   
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSQDAFGVAFLSNRGLYLPSPEF 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + +L ++  +   R +      TG+      I   L+  LP L        
Sbjct: 178 AAGFVPALIAVLLAVIAIIALHRYNHFRQLHTGQFHRTWPIGLVLLIALPALAHWLYGPA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 LHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQDEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 ALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 358 AIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392


>gi|92112256|ref|YP_572184.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795346|gb|ABE57485.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 392

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 168/389 (43%), Positives = 240/389 (61%), Gaps = 1/389 (0%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           +    R+    +     + +Q +L   L  +  + V N   N+E   ++ G GFL ERAG
Sbjct: 4   SPSGDRVALWRNPTFRALLLQGVLLAALVALIAFIVGNTMANLEARGITTGFGFLDERAG 63

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F I Q ++ ++ DS+Y    LVG +NT  ++  G++ ATIIG  VG  RLS N L+A + 
Sbjct: 64  FSIPQTLIEFSGDSTYGRTFLVGLLNTLLVSAMGIVAATIIGFAVGIARLSPNWLLARLA 123

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             YVE+FRNIP LV I F Y +VL  LP P  S+ L   +F+N RGL  P     +    
Sbjct: 124 GAYVEIFRNIPLLVQILFWYFAVLQALPSPRDSLSLMEVVFINVRGLVIPDPQPLSGFAA 183

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
             ++ ++GIV ++     ++    +TG+ALP+ ++   LI G P  V +     L +  P
Sbjct: 184 TPWALLVGIVAAIALGIYAKRRQARTGQALPIYWLGAGLIIGTPLAVFLLTGAPLEWSIP 243

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG TV PE  +L++ALS YTA+FIAEIVRSG+++VP GQ+EA+ AL L    
Sbjct: 244 ELKGFNFSGGVTVIPELAALWLALSIYTASFIAEIVRSGILSVPSGQVEASRALSLPEAI 303

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIIL 368
             R V++PQAMR I+P LTSQYLNL+KNSSLA A+G+ DLV+V  GT +NQTGQAIEI+ 
Sbjct: 304 TLRKVVIPQAMRVIVPQLTSQYLNLIKNSSLATAIGYPDLVAVFAGTTLNQTGQAIEIVA 363

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M +YL++S++++  MN  NA+  LKE+
Sbjct: 364 MTMAVYLTISLIVSALMNMYNARTLLKER 392


>gi|322834719|ref|YP_004214746.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169920|gb|ADW75619.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 392

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 153/380 (40%), Positives = 223/380 (58%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L +  V     QI   +LL     + ++N   N+    ++ G  FL + AGF I Q ++ 
Sbjct: 13  LTNPAVRAWIYQIFAVVLLVACLGYLLHNTITNLTTRGITSGFAFLEKGAGFGIVQHLID 72

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +YA   ++G +NT  ++   ++ A+I+G ++G GRLS N L+  +  VY+E FRN
Sbjct: 73  YQEGDTYARVFVIGLLNTLLVSALCIVFASILGFIIGLGRLSDNWLIRKVSTVYIETFRN 132

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ IFF Y +VL  LP P  S+      F++NRGL  P+  +   +     + +L I
Sbjct: 133 IPPLLQIFFWYFAVLRNLPGPRQSLNAFDLAFVSNRGLYLPSPELAPGSLAGFIAVLLAI 192

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
              +   R +      TG+   +   +  ++   P L  +     LH+D P L  FNF G
Sbjct: 193 FGIIALQRYNHFRQIHTGRIWHIWPWAIVMLVVFPALAHLIFGPALHWDVPALRGFNFRG 252

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE  +L +ALS YT+ FIAE++RSG+ +V  GQ EAA +LGL +    R V+LPQ
Sbjct: 253 GMVLIPELAALTLALSVYTSTFIAEVIRSGIQSVSHGQHEAARSLGLPNPVTLRQVILPQ 312

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           AMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +
Sbjct: 313 AMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLII 372

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ I+  MN  N +IAL E+
Sbjct: 373 SLAISFLMNIYNRRIALVER 392


>gi|118589035|ref|ZP_01546442.1| probable general l-amino acid transport permease abc transporter
           protein [Stappia aggregata IAM 12614]
 gi|118438364|gb|EAV44998.1| probable general l-amino acid transport permease abc transporter
           protein [Stappia aggregata IAM 12614]
          Length = 401

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 169/399 (42%), Positives = 232/399 (58%), Gaps = 8/399 (2%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
           +      +R   L D +   I  Q++L + L  +    V N   N+E+ N++ G GF+  
Sbjct: 3   QDSAGAPARASLLNDPKARGIFYQLVLVVALVTLGYVIVTNTIANLERQNIASGWGFVGN 62

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF  +Q +V Y+  SSY  A+ VGF+NT  +A  G+  AT+IG ++G  RLS N ++ 
Sbjct: 63  TAGFGTNQSLVEYSETSSYGRALFVGFLNTLLVAGVGIFFATVIGFIIGIARLSNNWVIN 122

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +   YVE+ RNIP L+ IFF Y +VL  +P       L     LN  GL  P   M T 
Sbjct: 123 RLAYCYVELVRNIPLLLQIFFWYFAVLRSIPSKREKWSLFDTFHLNIGGLRLPKPIMGTG 182

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           ++   ++ ++GI  +    R +R   E TG+  P       LI  LP L    +   +  
Sbjct: 183 SEWVGYALLIGIAAAFLVARWARKRQEATGQPFPSFLTGLGLILMLPILTYFVMGMPISL 242

Query: 247 DKP--------VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           + P        +   F    G  V PEF++L  AL+ YTA+FIAEIVR+G+ AV  GQ E
Sbjct: 243 EHPNFVETGPILRQGFELNVGLNVIPEFLALTAALAIYTASFIAEIVRAGIQAVSHGQTE 302

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL +    RLV++PQAMR IIPPLTSQYLNL KNSSLAVA+ + DLVS+GGT++N
Sbjct: 303 AAHALGLRNGPTLRLVVIPQAMRVIIPPLTSQYLNLTKNSSLAVAIAYPDLVSMGGTVLN 362

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QTGQAIEII IWM +YLSLS++ + FMN  N ++AL E+
Sbjct: 363 QTGQAIEIIGIWMVVYLSLSLITSAFMNWYNQRMALVER 401


>gi|261819588|ref|YP_003257694.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261603601|gb|ACX86087.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 392

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 164/394 (41%), Positives = 235/394 (59%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QII+ + +  I  + ++N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKGDLS----LTNPAVRAWLYQIIVVITVLAIAAYLLHNTVTNLAQRGITSGFDFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I Q ++ Y    +YA   LVG  NT  ++   ++ A+I+G  +G  RLS N L
Sbjct: 59  NKSAGFGIVQHLIDYQQGDTYARVFLVGLFNTLLVSALCIVFASILGFTIGLARLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  +Y+E+FRNIPPL+ IFF Y +VL  LP P  SI      FL+NRG   P+  M 
Sbjct: 119 LRKISNIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQSISAFDIAFLSNRGFYLPSPEMG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                F  S ++ +V++    R ++ +H  TG+      ++  L+  L  L  +      
Sbjct: 179 PGTAAFFLSLLITLVVTWAVLRRNQRYHALTGQVRRTWPLTLGLLLVLCALSHLIFGPAF 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H+D P L  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA +LG
Sbjct: 239 HWDVPELKGFNFRGGMVLIPELAALTVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLLMNLYNRKIALVER 392


>gi|50119204|ref|YP_048371.1| L-amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609730|emb|CAG73164.1| L-amino acid ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 392

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 160/394 (40%), Positives = 235/394 (59%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QI++ + +  +  + ++N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKGDLS----LTNPAVRAWLYQIVVVIAVLSVAAYLLHNTVTNLSQRGITSGFDFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I Q ++ Y    +YA   LVG  NT  ++   ++ A+I+G  +G  RLS N L
Sbjct: 59  NKSAGFGIVQHLIDYQQGDTYARVFLVGLFNTLLVSALCIVFASILGFTIGLARLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  +Y+E+FRNIPPL+ IFF Y +VL  LP P  SI      FL+NRG   P+  M 
Sbjct: 119 LRKISNIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQSISAFDIAFLSNRGFYLPSPEMG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                F  S ++ +V++    R ++ +H  TG+      ++  L+  L  L  +      
Sbjct: 179 PGTAAFFLSLLITLVVTWSVFRRNQRYHALTGQVRRTWPLTLGLLLILCALSHLVFGPAF 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H++ P L  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA +LG
Sbjct: 239 HWNVPELKGFNFRGGMVLIPELAALTVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N +IAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLLMNLYNRRIALVER 392


>gi|300718663|ref|YP_003743466.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064499|emb|CAX61619.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 392

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 232/395 (58%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV R FS      +  V     QII  +++  +  + V+N   N+    ++ G GF
Sbjct: 2   SQRPTVKRDFS----FSNPAVRAWLYQIIAIVVVLGVAGYLVHNTVINLASRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ Y+   +YA   LVG  NT  ++   ++ A+++G  +G  RLS N 
Sbjct: 58  LERSAGFGIVQHLIDYSEGDTYARVFLVGLTNTLLVSALCIVFASLLGFFIGLSRLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  I  +Y+E FRNIPPL+ IFF Y +VL  LP P  +       F++NRGL  P    
Sbjct: 118 LLRKISTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQAASAFDLAFVSNRGLYIPWPQY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 FV + ++ +  ++   R +R +  KTG+       S  ++   P +  +     
Sbjct: 178 AVGTWPFVIALLVAVAGTVALFRYNRTYQLKTGQLRRTWPASVAMVIIFPVIAHLTFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDIPQLRGFNFRGGFALIPELAALTLALSIYTSTFIAEVIRSGIQSVPYGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           G+ +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GIPNPVTLRQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S++I+L MN  N KI L E+
Sbjct: 358 AIETIAITMGVYLVISLLISLLMNIYNRKIRLIER 392


>gi|146313342|ref|YP_001178416.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145320218|gb|ABP62365.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Enterobacter sp. 638]
          Length = 393

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 160/377 (42%), Positives = 225/377 (59%), Gaps = 1/377 (0%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
             V     QII  +++ V+ ++ V+N   N+    ++ G  FL   AGF I Q ++ Y  
Sbjct: 17  PAVRAWLFQIIAIVVVVVVAIYLVHNTVTNLSNRGITSGFAFLDRTAGFGIVQHLIDYQE 76

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  +Y+E FRNIPP
Sbjct: 77  SDTYGRVFLVGLLNTLLVSALCIVFASFLGFFLGLARLSENWLLRKLSTIYIETFRNIPP 136

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ IFF Y +VL  LP P  ++      FL+NRGL  P+          + + V+ + +S
Sbjct: 137 LLQIFFWYFAVLRNLPGPRQALDAFELFFLSNRGLYIPSPEAGEGLWAAIAAIVIAVAIS 196

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +   R +R    KTG+      +   LI GLP L        LH+D P L  FNF GG  
Sbjct: 197 VGLFRYNRMHQMKTGQLRKTWPVGLLLIVGLPLLAQGIFGSALHWDIPELRGFNFRGGMV 256

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           + PE  +L +ALS YT+AFIAEI+RSG+ AVP GQ EAA +LGL +    R V++PQA+R
Sbjct: 257 LIPELAALTLALSIYTSAFIAEIIRSGIQAVPHGQHEAARSLGLPNPVTLRQVIIPQALR 316

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            IIPPLTSQYLN+ KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S+ 
Sbjct: 317 VIIPPLTSQYLNIAKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLVISLT 376

Query: 381 IALFMNRLNAKIALKEK 397
           I+L MN  N +IAL E+
Sbjct: 377 ISLLMNIYNRRIALVER 393


>gi|227325811|ref|ZP_03829835.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 407

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 150/373 (40%), Positives = 226/373 (60%), Gaps = 1/373 (0%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
                Q +L LL+     W   NV  N+   N++ G  FL   A FEI + ++ +T   S
Sbjct: 36  RAWIYQCLLGLLIVAFSYWLYANVVENLRSQNIATGFSFLDHTAQFEIGEKLIAFTPRDS 95

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A+ VG +NT ++   G++ AT++G  VG  R+S N L+A +   YVE+ RNIP ++ 
Sbjct: 96  YLRALGVGLLNTLYVTLCGIVLATLLGFSVGIARVSRNWLLARLAGGYVELMRNIPVILQ 155

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           + F    V+  LP P  +I L    FL NRGLSF              + +  +++SL  
Sbjct: 156 VIFW-SVVIRNLPSPRDAIELGSLGFLTNRGLSFSVPAAHHGWMWTGSALLAAVLISLIL 214

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            R++R+  E  G++LP   ++   I GLP LV          D+P+L  FNF GG TVSP
Sbjct: 215 KRVARYMRENVGRSLPTGRLTLAAIIGLPLLVWWLSGAPAELDRPILRGFNFRGGFTVSP 274

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF +L + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL  +     R +++PQAMR I+
Sbjct: 275 EFTALLLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIV 334

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTSQY++L KNSS+AV VG+ +L ++  T++NQTGQA+E+I I M +YL++SI+ +L 
Sbjct: 335 PPLTSQYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVSIVTSLL 394

Query: 385 MNRLNAKIALKEK 397
           MN  N  +A+KE+
Sbjct: 395 MNLFNRVVAIKER 407


>gi|83592339|ref|YP_426091.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575253|gb|ABC21804.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 398

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 172/398 (43%), Positives = 230/398 (57%), Gaps = 1/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M             R   L D RV  I+ Q++    L   F    +N   NM    ++ G
Sbjct: 1   MTPPIHPPGPLKAPRPHPLRDPRVRAIAFQVLTIAALVWFFWAIFDNTLTNMRTRGITTG 60

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             FL   AGF I   ++PY    SY    +VG +NT  ++  G+I AT+IG +VG  RLS
Sbjct: 61  FAFLDHSAGFGILMSLIPYDETYSYGRTFVVGLLNTLLVSGLGVIAATLIGFVVGVARLS 120

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N L+A +  +YVE  RNIP L+ IFF Y +VL  LP P  S+ L    FLNNRG   P+
Sbjct: 121 RNWLIAKLALIYVETLRNIPLLLQIFFWYFAVLRPLPQPRQSLELGALFFLNNRGFYMPS 180

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                   +   + V+ + L+L   R +      TG   P       L+ GLP L  +AL
Sbjct: 181 PIAGDGMALVGLALVVALALALAIGRWATRRRMATGLGFPSWRTGLALVLGLPLLAFLAL 240

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              + FD P L  FNF+GGS + PE ++L +ALS YTAAFIAEIVRSG++AV  GQ EAA
Sbjct: 241 GTPVTFDVPHLQGFNFVGGSRLIPEMVALLLALSMYTAAFIAEIVRSGILAVSHGQTEAA 300

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
            +LGL      RL++LPQA+R +IPP TSQYLNL+KNSSLA A+G+ DLVSV  GT +NQ
Sbjct: 301 HSLGLKPTATLRLIVLPQALRVMIPPTTSQYLNLIKNSSLATAIGYPDLVSVFMGTTLNQ 360

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TGQA+EI+ + M +YL +S++++  MN  N  +ALKE+
Sbjct: 361 TGQAVEIVGMTMAVYLLISLVVSGLMNWYNRAVALKER 398


>gi|238782939|ref|ZP_04626967.1| amino-acid ABC transporter permease protein yhdX [Yersinia
           bercovieri ATCC 43970]
 gi|238716142|gb|EEQ08126.1| amino-acid ABC transporter permease protein yhdX [Yersinia
           bercovieri ATCC 43970]
          Length = 400

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 161/395 (40%), Positives = 225/395 (56%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     + ++N   N+    ++ G  F
Sbjct: 10  SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLIHNTITNLSTRGITSGFAF 65

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y    LVG  NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 66  LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLFNTLLVSVLCIFFASILGFFIGLARLSDNW 125

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  VY+E FRNIPPL+ IFF Y +VL  LP P  S+      FL+NRGL  P+   
Sbjct: 126 LLRKLSTVYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSMDAFGVAFLSNRGLYLPSPEF 185

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + +L +   +   R +      TG+      +   L+  LPTL  +     
Sbjct: 186 AAGFIPALVAVLLAVAAIIALYRYNHFRQRHTGQFHRTWPLGLLLLIALPTLAHLMFGPA 245

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 246 LHWDIPELRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSL 305

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 306 ALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 365

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 366 AIETIAITMSVYLVISLSISFLMNLYNRRIALVER 400


>gi|89901103|ref|YP_523574.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89345840|gb|ABD70043.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 391

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 145/388 (37%), Positives = 220/388 (56%), Gaps = 1/388 (0%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
                            +  Q+I  L +     +  +N   NM    +  G  FL + AG
Sbjct: 5   NPPKKNNWSWRSQAFRGLIYQVIAILAIGGFVWFLAHNTLLNMRVRGIQSGFDFLKQAAG 64

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+I + + P+ S   Y  A LVG  NT  +A  G+I AT++GTL+G GR S N LV  +C
Sbjct: 65  FDIGESLYPFDSAQPYWQAFLVGVTNTLRVAVLGIILATVLGTLLGVGRFSRNALVRGLC 124

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +VYVE+FRNIP L+ +   Y  +  VLP    + V     FL+  GL++P          
Sbjct: 125 QVYVELFRNIPVLLQLLLWYVILTEVLPAASDAWVF-GSFFLSKGGLNYPIPVWSIGQLW 183

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
             +  + G+VL+    R ++   E TG+   ++++   ++     L  +        ++P
Sbjct: 184 AAYGLIPGLVLAWVYRRWAKRQFEATGRVRSMVWMPLVIVLAASLLGWLLGGAPTALNRP 243

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             G F+   G  ++PEF+++ + L+ YTA+FIAE+VR G+ +V  GQ EAA ALGL+ ++
Sbjct: 244 FKGDFSIENGGALTPEFLAVLLGLTLYTASFIAEVVRGGIQSVALGQSEAAAALGLSRQQ 303

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA+R IIPPLT+QYLNL KNSSLAVA+G+ D+VS+  T +NQTG+A+E I +
Sbjct: 304 EMRLVMLPQALRVIIPPLTNQYLNLTKNSSLAVAIGYPDVVSIANTALNQTGRAVECISL 363

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M +YLS S+  A+ MN  N++ A+KE+
Sbjct: 364 VMLVYLSTSLGTAVLMNWYNSRSAIKER 391


>gi|89073071|ref|ZP_01159618.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89051289|gb|EAR56745.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 399

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 182/395 (46%), Positives = 247/395 (62%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
                V+   S+    Y+     +  Q+I  + L   F   VNN   N+E   +S G  F
Sbjct: 5   PHTSDVSNPKSKQNIFYNPTFRAVIFQLIAVIGLVFFFYSIVNNALTNLESRGISTGFDF 64

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           LS+ AGF I   ++ Y    SY    +VG +NT  +A  G+I ATIIG ++G  RLS+N 
Sbjct: 65  LSQEAGFGIGLKLIDYDETYSYGRTFVVGLLNTALVAVLGIILATIIGFIMGIARLSSNW 124

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L++ +  VY+EVFRNIP L+ IFF Y +VL  LP P  SI L   +FLN RGLS P+   
Sbjct: 125 LISRLAAVYIEVFRNIPLLLQIFFWYFAVLQALPSPRQSISLGEAVFLNIRGLSIPSPIY 184

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            + ++I  +   + +V+SLF  R ++   ++TG+ LP+L   T L+ GLP +        
Sbjct: 185 GSGSEIVGWCLAIAVVISLFFYRYAKKKQQQTGQQLPVLLTVTGLVLGLPLIAFFITGMP 244

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  + P L  FNF GG T+ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA AL
Sbjct: 245 IDLEYPELKGFNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEAL 304

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL+  K  RLV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DL+SV  GT +NQTGQ
Sbjct: 305 GLSRNKTLRLVVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLISVFAGTTLNQTGQ 364

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIEII + M +YL+LS++ +L MN  N K+AL E+
Sbjct: 365 AIEIIAMTMAVYLTLSLLTSLVMNIYNKKVALVER 399


>gi|253690350|ref|YP_003019540.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756928|gb|ACT15004.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 407

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 150/390 (38%), Positives = 231/390 (59%), Gaps = 1/390 (0%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
           T +     +       +     Q +L LL+     W   NV  N+   N++ G GFL   
Sbjct: 19  TPSYARRLLNAFDSKSLRAWIYQCLLGLLIVAFSYWLYANVVENLRSQNIATGFGFLDHT 78

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           A FEI + ++ +T   SY  A+ VG +NT ++   G++ AT++G  VG  R+S N L+A 
Sbjct: 79  AQFEIGEKLIAFTPRDSYLRALGVGLLNTLYITLCGIVLATLLGFSVGIARVSRNWLLAR 138

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +   Y+E+ RNIP ++ + F    V+  LP P  +I L    FL NRGLSF         
Sbjct: 139 LAGGYIEMMRNIPVILQVIFW-SVVIRNLPSPRDAIELGNLGFLTNRGLSFAVPAAHHGW 197

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                + +  +++SL   R++R+  E  G++LP   ++   + GLP LV          D
Sbjct: 198 LWTGIALLAAVLISLILNRVARYVRESRGRSLPTGRLTLAALIGLPLLVWWLSGAPAELD 257

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           +P+L  FNF GG TVSPEF +L + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL  + 
Sbjct: 258 RPILRGFNFRGGFTVSPEFTALLLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSP 317

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R +++PQAMR I+PPLTSQY++L KNSS+AV VG+ +L ++  T++NQTGQA+E+I
Sbjct: 318 WHMMRHIIIPQAMRVIVPPLTSQYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVI 377

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I M +YL++SI+ +L MN  N  +A+KE+
Sbjct: 378 AIMMVVYLTVSIVTSLLMNLFNRVVAIKER 407


>gi|227114000|ref|ZP_03827656.1| L-amino acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 392

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 164/394 (41%), Positives = 235/394 (59%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QI++ + +  +  + ++N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKGDLS----LTNPAVRAWLYQIVVVIAVLAVAAYLLHNTVTNLSQRGITSGFDFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I Q ++ Y    +YA   LVG  NT  ++   ++ A+I+G  VG  RLS N L
Sbjct: 59  NKSAGFGIVQHLIDYQQGDTYARIFLVGLFNTLLVSALCIVFASILGFTVGLARLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  VY+E+FRNIPPL+ IFF Y +VL  LP P  SI      FL+NRG   P+    
Sbjct: 119 LRKISNVYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQSISAFDVAFLSNRGFYLPSPEWG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A  F  S ++ +V++    R ++ +H  TG+      ++  L+  L  L  +      
Sbjct: 179 PGAAAFFLSLIITLVVTWGVFRRNQRYHASTGQPRRTWPLTLGLLLVLCALSHLIFGPAF 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H+D P L  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA +LG
Sbjct: 239 HWDMPELKGFNFRGGMVLIPELAALTVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLLMNLYNRKIALVER 392


>gi|238798511|ref|ZP_04641990.1| L-amino acid ABC transporter permease protein [Yersinia mollaretii
           ATCC 43969]
 gi|238717673|gb|EEQ09510.1| L-amino acid ABC transporter permease protein [Yersinia mollaretii
           ATCC 43969]
          Length = 400

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 222/395 (56%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     + ++N   N+    ++ G  F
Sbjct: 10  SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLIHNTITNLSTRGITSGFAF 65

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y     VG  NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 66  LNNSAGFGIVQHLIDYKQGDTYGRVFFVGLFNTLLVSVLCIFFASILGFFIGLARLSDNW 125

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E+FRNIPPL+ IFF Y +VL  LP P  S+      FL+NRGL  P+   
Sbjct: 126 LLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQSMDAFGVAFLSNRGLYLPSPEW 185

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + +L +       R +      TG+      I   L+  LP L        
Sbjct: 186 AAGFMPALIAVLLAVAAMFALYRYNHFRQLHTGQFHRTWPIGLLLLIALPALSHFMFGPA 245

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 246 LHWDIPELRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSL 305

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 306 ALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 365

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 366 AIETIAITMSVYLVISLSISFLMNIYNRRIALVER 400


>gi|251791416|ref|YP_003006137.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540037|gb|ACT08658.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 392

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 160/394 (40%), Positives = 232/394 (58%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QI+  +++     + ++N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKGDLS----LTNPAVRAWLYQILAVVIVVTTVGYLLHNTVTNLAQRGITSGFAFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +  AGF I Q ++ Y    +YA   +VG +NT  ++   +I A+++G +VG  RLS N L
Sbjct: 59  NNSAGFGIVQHLIDYEQGDTYARVFVVGLLNTLLVSAICIICASLLGFIVGLSRLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P     
Sbjct: 119 LRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQAVNAFDTFFLSNRGLYIPAAEFG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A       ++ +  ++   R ++ +HE TG+      I   ++  L  L  +     L
Sbjct: 179 PGALPSFLVLLISLGCAVALHRRNKRYHELTGQQRRYWPIPLVMLIVLLGLSHLIFGQAL 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H D PVL  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA++LG
Sbjct: 239 HGDFPVLKGFNFNGGLVLIPELAALALALSVYTSSFIAEIIRSGIQSVSHGQHEAALSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L      R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPKPVTLRKVILPQALRVIIPPLTSQYLNVVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLLMNIYNRKIALIER 392


>gi|156974644|ref|YP_001445551.1| ABC transporter permease [Vibrio harveyi ATCC BAA-1116]
 gi|156526238|gb|ABU71324.1| hypothetical protein VIBHAR_02362 [Vibrio harveyi ATCC BAA-1116]
          Length = 390

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 169/390 (43%), Positives = 238/390 (61%), Gaps = 1/390 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           +++       +Y+    +   QII    L   F   +NN   N+E   ++ G GFL++ A
Sbjct: 1   MSKPSGSKSLIYNPAFRSALFQIIAVAALVFFFYTIINNALTNLEARGIATGFGFLNQEA 60

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF I   ++ Y    SY    +VG +NT  ++  G+I AT+IG ++G  RLS+N LV+ +
Sbjct: 61  GFGIGLTLIEYDETFSYGRTFVVGLLNTALVSVLGIILATVIGFVMGIARLSSNWLVSRL 120

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             VY+E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP   M+  + 
Sbjct: 121 AAVYIETFRNIPLLLQIFFWYFAVLQALPSPRQSMSLGEAIFLNVRGLYFPAPVMEAGSS 180

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             + + ++GI+ S+     + +    TG+  P+  I   L+  LP +V       +    
Sbjct: 181 FVIAALIIGIIASILINVWANNKQRLTGQQTPMGRIVFGLVIVLPLVVYFLAGMPISLQY 240

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   
Sbjct: 241 PELKGFNFRGGISIIPELAALLLALSVYTASFIAEIVRSGINAVSHGQTEAAMSLGLPRT 300

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
           K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII
Sbjct: 301 KTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEII 360

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 361 AMTMGVYLTLSLITSALMNVYNRKVALVER 390


>gi|90578888|ref|ZP_01234698.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90439721|gb|EAS64902.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 399

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 179/395 (45%), Positives = 246/395 (62%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
                V+   S+    Y+     +  Q+I  + L   F   VNN   N+E   +S G  F
Sbjct: 5   PHTSDVSNPKSKQNIFYNPTFRAVIFQLIAVIGLAFFFYSIVNNALTNLESRGISTGFDF 64

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           LS+ AGF I   ++ Y    +Y    +VG +NT  +A  G+I ATIIG ++G  RLS+N 
Sbjct: 65  LSQEAGFGIGLTLIDYDETYTYGRTFVVGLLNTALVAVLGIILATIIGFIMGIARLSSNW 124

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L++ +  VY+EVFRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGLS P+   
Sbjct: 125 LISRLAAVYIEVFRNIPLLLQIFFWYFAVLQALPSPRQSVSLGEAIFLNVRGLSIPSPIY 184

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            + ++I  +   + ++LS+   R ++   ++TG+ LP+LY    L+ GLP +        
Sbjct: 185 GSGSEIIGWCLAIAVMLSIIFYRYAKTKQQQTGQQLPVLYTVAGLVLGLPLVAFFVTGMP 244

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  + P L  FNF GG T+ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA AL
Sbjct: 245 ITLEYPELKGFNFKGGITILPELAALLLALSIYTASFIAEIVRSGINAVSHGQTEAAEAL 304

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL+  K  RLV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQ
Sbjct: 305 GLSKSKTLRLVVVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQ 364

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIEII + M +YL+LS++ +L MN  N K+AL E+
Sbjct: 365 AIEIIAMTMAVYLTLSLLTSLLMNIYNKKVALVER 399


>gi|123444012|ref|YP_001007982.1| putative ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090973|emb|CAL13856.1| Putative ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 392

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 222/395 (56%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     +  +N   N+    ++ G  F
Sbjct: 2   SQRPTVKGAFS----LTNPAVRAWLYQIIALLILLGCGAYLFHNTITNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    +Y    LVG  NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LNNSAGFGIVQHLIDYEQGDTYGRVFLVGLFNTLLVSVLCIFFASILGFFLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S+      FL+NRGL  P+   
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLDAFGVAFLSNRGLYLPSPEF 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + +L ++  +   R +      TG+      I   L+  LP L        
Sbjct: 178 AAGFVPALIAVLLAVIAIIALYRYNHFRQLHTGQFRRTWPIGLVLLIALPALAHWLYGPA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 LHWDLPQLRGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 ALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +I L E+
Sbjct: 358 AIETIAITMSVYLVISLSISFLMNLYNRRITLVER 392


>gi|126731768|ref|ZP_01747572.1| putative amino acid ABC transporter permease protein [Sagittula
           stellata E-37]
 gi|126707595|gb|EBA06657.1| putative amino acid ABC transporter permease protein [Sagittula
           stellata E-37]
          Length = 399

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 161/388 (41%), Positives = 241/388 (62%), Gaps = 1/388 (0%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
               +    +Y      I+ Q+++A+ + +  L+  NNV  N+   +++ G GFL + A 
Sbjct: 13  KPRATLGTIIYSKTFRTIATQVVMAVFVVMAGLFLYNNVVENLRAQSIATGFGFLEQDAQ 72

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+I +  +P+ +  +YA A LVG +NT  ++ +G++ ATI+G  VG  R+S+N L++ + 
Sbjct: 73  FDIGETPIPFNATDTYARAFLVGLLNTLRVSAAGILLATILGFSVGFARVSSNWLLSKVA 132

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             YVE+ RNIP ++ + F    VL  LP    +I      FLNNRGLSF     D     
Sbjct: 133 TGYVEIVRNIPVILQVIFWA-VVLRNLPAARDAIDFGGFAFLNNRGLSFAVPATDPVHGP 191

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +F+   GIVL++    L+R   E TG+ + +L+ S  LIFGLP +V +          P
Sbjct: 192 MIFACFAGIVLAILGGYLARRHRENTGRYISMLWPSIGLIFGLPAIVWLLGGAPTALSVP 251

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  FNF GG T+SPEF +L I ++ Y + FIAEIVR+GL A PRGQ+EAA ++GL  R 
Sbjct: 252 ALKGFNFRGGVTISPEFTALLIGIALYASGFIAEIVRAGLQATPRGQIEAARSIGLRPRF 311

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA+R I+PPLTSQY++L+KNSS+AV VG+ DLV++G T +NQTGQA+E I +
Sbjct: 312 VMRFVVLPQALRVIVPPLTSQYVSLIKNSSIAVVVGYPDLVNIGNTAMNQTGQAVEAIAV 371

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M +YL++S++ + FMN  N  +A+KE+
Sbjct: 372 MMLVYLTVSLVTSTFMNVYNRLVAIKER 399


>gi|190891586|ref|YP_001978128.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696865|gb|ACE90950.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 406

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 201/385 (52%), Positives = 265/385 (68%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD  +  I  Q++  +LL V   W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPTIRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A++VG +NT  +A +G+I ATIIG ++G GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALVVGLLNTLLIAVTGIITATIIGFIIGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP         +   
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPKPIFGDTFWLVGV 201

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + V+ IV ++   R +      TG+    ++ S  L+ GLP +  +     L FD P+ G
Sbjct: 202 ALVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVAGAPLSFDYPIAG 261

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  VP+GQ EAA ALGL     TR
Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM 
Sbjct: 322 LVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YLSLSI+ +L MN  NAK+AL E+
Sbjct: 382 VYLSLSIVTSLLMNWFNAKMALVER 406


>gi|237730187|ref|ZP_04560668.1| amino acid ABC transporter permease [Citrobacter sp. 30_2]
 gi|226908793|gb|EEH94711.1| amino acid ABC transporter permease [Citrobacter sp. 30_2]
          Length = 393

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 160/380 (42%), Positives = 229/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             +  V     QI+  + +  I ++ ++N  NN+  S ++ G  FL   AGF I Q ++ 
Sbjct: 14  FSNPAVRAWLFQILAVIAVISIAVYLIHNTINNLNNSGITSGFSFLDRSAGFGIVQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y    +VG +NT  ++   ++ A+I+G  +G  RLS N L+  +  +Y+E FRN
Sbjct: 74  YEQGDTYGRVFVVGLLNTLLVSALCIVFASILGFFLGLARLSDNWLLRKLSTIYIETFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ IFF Y +VL  LP P  ++     MFL+NRGL  P   M      F  + V+ +
Sbjct: 134 IPPLLQIFFWYFAVLRNLPGPRQAVNALDLMFLSNRGLYIPAPQMGEGFFAFCTAVVIAL 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V+++   R +R    KTG+       +  LI  LP +        LH+D P L  FNF G
Sbjct: 194 VVTIGLFRFNRMHQTKTGQLRRTWPTALALIVLLPVISQWMFGAALHWDIPALRGFNFRG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQ
Sbjct: 254 GMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +
Sbjct: 314 ALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLII 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ I+L MN  N +IAL E+
Sbjct: 374 SLSISLLMNIYNRRIALIER 393


>gi|311277769|ref|YP_003940000.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308746964|gb|ADO46716.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 393

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 230/380 (60%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
           L +  V     QI+  + +  I ++ ++N   N+    ++ G  FL   AGF I Q ++ 
Sbjct: 14  LSNPTVRAWLFQIVAVVAIASIVIYLIHNTITNLNNRGITSGFAFLDRSAGFGIVQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y    +VG +NT  ++   ++ A+IIG  +G  RLS N L+  +  +Y+EVFRN
Sbjct: 74  YQEGDTYGRVFVVGLLNTLLVSALCIVFASIIGFFLGLARLSENWLLRKLSTLYIEVFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ IFF Y +VL  LP P  ++     ++L+NRGL  P   +      F  + +L I
Sbjct: 134 IPPLLQIFFWYFAVLRNLPGPRQAVDAFDLVYLSNRGLYIPAPQLGEGLLAFTGAVLLAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V+S+   R ++    KTG+       +  L+  LP L        +H+D P L  FNF+G
Sbjct: 194 VISIGLYRYNQTHQIKTGQLRRTWPTALGLLIFLPLLAHWTFGAAIHWDIPQLRGFNFLG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQ
Sbjct: 254 GMALIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +
Sbjct: 314 ALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLII 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ I+L MN  N ++AL E+
Sbjct: 374 SLSISLLMNIYNRRMALIER 393


>gi|238789894|ref|ZP_04633674.1| L-amino acid ABC transporter permease protein [Yersinia
           frederiksenii ATCC 33641]
 gi|238721967|gb|EEQ13627.1| L-amino acid ABC transporter permease protein [Yersinia
           frederiksenii ATCC 33641]
          Length = 392

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 160/395 (40%), Positives = 223/395 (56%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     + ++N   N+    ++ G  F
Sbjct: 2   SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLIHNTLTNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ Y    +Y    LVG +NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LHNSAGFGIVQHLIDYQQGDTYGRVFLVGLLNTLLVSVLCIFFASILGFFLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S+      FL+NRGL  P+   
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLDAFGVAFLSNRGLYLPSPEF 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + +L     +   R +      TGK      +   L+  LP L  +     
Sbjct: 178 AAGFFPALLAVLLAAAFIIALARYNHFRQLHTGKFHRSWPMGLLLLIVLPALAHLLYGPA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 LHWDLPQLKGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPHGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 ALPNTVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 358 AIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392


>gi|327190791|gb|EGE57859.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 406

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 202/385 (52%), Positives = 266/385 (69%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD  +  I  Q++  +LL V   W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPTIRGIFFQVLTIVLLVVFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A++VG +NT  +A +G+I ATIIG ++G GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALVVGLLNTILIAVTGIITATIIGFIIGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP         +   
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPKPIFGDTFWLVGV 201

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +FV+ IV ++   R +      TG+    ++ S  L+ GLP +  +     L FD P+ G
Sbjct: 202 AFVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVAGAPLSFDYPIAG 261

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  VP+GQ EAA ALGL     TR
Sbjct: 262 KFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAAGALGLHPSSITR 321

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQTGQA+E+ILIWM 
Sbjct: 322 LVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQTGQAVEVILIWMV 381

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YLSLSI+ +L MN  NAK+AL E+
Sbjct: 382 VYLSLSIVTSLLMNWFNAKMALVER 406


>gi|311109073|ref|YP_003981926.1| general L-amino acid transporter permease AapQ [Achromobacter
           xylosoxidans A8]
 gi|310763762|gb|ADP19211.1| general L-amino acid transport system permease protein AapQ
           [Achromobacter xylosoxidans A8]
          Length = 370

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 171/371 (46%), Positives = 232/371 (62%), Gaps = 1/371 (0%)

Query: 27  ISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYA 86
           +  Q++    +     + V+N  +N+   N++ G GFL   AGF I +  + Y+   +Y 
Sbjct: 1   MVYQVLALAAVAWAVWFLVSNTLHNLSVRNIATGFGFLQREAGFAIGETPIAYSPSDTYG 60

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            AILVG +NT  +A  G++ ATI+GTL+G GRLS N LVA I  VYVEV RN+P L+ +F
Sbjct: 61  HAILVGLLNTLRVAVIGIVLATILGTLIGIGRLSKNWLVAKITSVYVEVMRNVPLLLQLF 120

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F Y  +   +P P  +     G+F++NRGL  P L  + +    +    L IV  +F   
Sbjct: 121 FWYALITENMPGPRQAHNPLPGVFISNRGLKVPGLEGN-SLDWMLGGLGLAIVAIIFLGH 179

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             +   E TG+  PL   +  L+ GLP +  +A    L  D PVL  FNF GG T+SPEF
Sbjct: 180 WGKKRQEATGRVFPLGRAAIGLLIGLPIVGWLASGASLTLDMPVLKGFNFSGGLTLSPEF 239

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L   L  YT+AFIAE+VRSG+ AV  GQ EAA +LGL  ++  RLV+LPQA+R IIPP
Sbjct: 240 AALMAGLVVYTSAFIAEVVRSGIQAVNTGQWEAAGSLGLRRKQVLRLVVLPQALRVIIPP 299

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +TSQYLNL KNSSLAVA+G+ D+VSV  T +NQTGQAIE ILI M  YL++S+ I++FMN
Sbjct: 300 MTSQYLNLTKNSSLAVAIGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVSLSISIFMN 359

Query: 387 RLNAKIALKEK 397
             N +IAL E+
Sbjct: 360 WYNKRIALVER 370


>gi|296533468|ref|ZP_06896048.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
 gi|296266203|gb|EFH12248.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
          Length = 400

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 169/392 (43%), Positives = 241/392 (61%), Gaps = 3/392 (0%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
           R    + F       D R+ +I  Q+++  ++  I  W V N  +N+E   ++ G GFL 
Sbjct: 12  RAPPKKGFRLS--WADERLRSIVWQVLVLGVVIAIIAWLVGNTQHNLEVRRIATGFGFLE 69

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
             AG  + + ++PY+   +YA A++VG +NT  +A  G++ AT+ GTL+G  RLS N L+
Sbjct: 70  REAGLPVAESLIPYSPTDTYARALMVGVLNTLKIAVVGVVLATLFGTLLGIARLSKNWLL 129

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
           + I   YVEV R++P L+ + F Y ++L  LP P  ++    G+FL+NRGL  P +    
Sbjct: 130 SRIAAAYVEVVRDLPLLLQLLFWY-AILQGLPGPRQALHPMEGVFLSNRGLKLPWIQWQD 188

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                +  FV GIVL++F  R +R      G+   +   +  LI GLP  +   L     
Sbjct: 189 AHSFALLGFVAGIVLTVFYARAARARQMADGQPRRVWPAALGLIIGLPLAIWAGLGAPWT 248

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D P L  FNF GG T++PE+ +L I L  YTAAFIAEIVR+G++AV +GQ EAA ALGL
Sbjct: 249 GDIPALRGFNFQGGLTITPEYFALLIGLVMYTAAFIAEIVRAGILAVAKGQWEAAEALGL 308

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
                 R ++LPQA+R I+PP+TSQYLNL KNSSLAVA+G+ D+VS+  T +NQTGQAIE
Sbjct: 309 PRGLIMRKIVLPQALRVIVPPMTSQYLNLTKNSSLAVAIGYQDIVSIANTTLNQTGQAIE 368

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I I M +YL++S+ I+LFMN  NA+IAL E+
Sbjct: 369 GIAIIMAVYLTISLSISLFMNWYNARIALVER 400


>gi|157148849|ref|YP_001456168.1| hypothetical protein CKO_04682 [Citrobacter koseri ATCC BAA-895]
 gi|157086054|gb|ABV15732.1| hypothetical protein CKO_04682 [Citrobacter koseri ATCC BAA-895]
          Length = 393

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 158/380 (41%), Positives = 226/380 (59%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             +  V     QI+  + +  + ++ ++N  NN+    ++ G  FL   AGF I Q ++ 
Sbjct: 14  FSNPAVRAWLFQILAVIAVVSVAVYLIHNTINNLSSRGITSGFAFLDRSAGFGIVQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y    LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  +Y+E FRN
Sbjct: 74  YEQGDTYGRVFLVGLLNTLLVSALCIVFASFLGFFLGLARLSDNWLLRKLSTIYIETFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ IFF Y +VL  LP P  ++     +FL+NRGL  P   +      F  + +L I
Sbjct: 134 IPPLLQIFFWYFAVLRNLPGPRQAVSALDLVFLSNRGLYIPAPQLGEGVIAFCVAILLAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V+S    R ++    KTG+       +  LI  LP +        LH+D P L  FNF G
Sbjct: 194 VISTGLFRFNKTHQIKTGQLRRTWPTALALIVLLPAVAQWLFGAALHWDVPELRGFNFRG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE  +L +ALS YT+AFIAEI+RSG+ AVP GQ EAA +LGL +    R V++PQ
Sbjct: 254 GMALIPELAALTLALSVYTSAFIAEIIRSGIQAVPHGQHEAARSLGLPNPVTLRQVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +
Sbjct: 314 ALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLII 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ I+L MN  N +IAL E+
Sbjct: 374 SLSISLLMNIYNRRIALIER 393


>gi|253686634|ref|YP_003015824.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753212|gb|ACT11288.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 392

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 163/394 (41%), Positives = 237/394 (60%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QI++ + +  +  + ++N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKGDLS----LTNPAVRAWLYQIVVVIAVLAVAAYLLHNTVTNLAQRGITSGFDFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ AGF I Q ++ Y    +YA   LVG  NT  ++   ++ A+I+G  +G  RLS N L
Sbjct: 59  NKSAGFGIVQHLIDYQQGDTYARVFLVGLFNTLLVSALCIVFASILGFTIGLARLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  +Y+E+FRNIPPL+ IFF Y +VL  LP P  SI      FL+NRG   P+  + 
Sbjct: 119 LRKISNIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQSISAFDVAFLSNRGFYLPSPELG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A  F  S ++ +V++    R ++ +H  TG+      ++  L+ GL  L  +      
Sbjct: 179 PGAAAFFLSLIITLVVTWGVFRRNQRYHALTGQPRRTWPLALGLLLGLCALSHLIFGAAF 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H+D P L  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA +LG
Sbjct: 239 HWDMPELKGFNFRGGMVLIPELAALTVALSVYTSSFIAEIIRSGIQSVSHGQHEAARSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L +    R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPNPVTLRKVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLLMNLYNRKIALVER 392


>gi|330504739|ref|YP_004381608.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328919025|gb|AEB59856.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 375

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 166/374 (44%), Positives = 232/374 (62%), Gaps = 1/374 (0%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
              + QII  + +  +  +   N   N+EK  +  G  FL+  AGF I Q ++ YT  +S
Sbjct: 2   RAWAFQIIAVVAVVALGWFLFQNTQANLEKRGIISGFAFLNNSAGFGIAQHLIDYTESNS 61

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    +VG +NT  ++F G++ A+I+G ++G  RLS N L++ +  VY+E+FRNIPPL+ 
Sbjct: 62  YGRVFVVGLLNTLLVSFIGIVLASILGFVLGVARLSPNWLISKLATVYIEIFRNIPPLLQ 121

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I F Y +V   LP P  S+ +    FLN+RGL  P  +   +  +F    +  IV  +  
Sbjct: 122 ILFWYFAVFLALPGPRQSLDVGETFFLNSRGLYMPAPSPSESFGLFAVVLLATIVGIVAL 181

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            R ++   E TGK  PLL+ S  LI  +P L  +     LH+  P L  FNF GG  + P
Sbjct: 182 GRWAKKRREATGKIFPLLWTSLALIVVIPGLTALVAGNPLHWSVPELTGFNFRGGWVMIP 241

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E M+L +AL+ YTAAFIAE VRSG++AV  GQ EAA +LGL      RLV++PQA+R II
Sbjct: 242 ELMALTLALTIYTAAFIAENVRSGIMAVSHGQTEAARSLGLRPGITLRLVIIPQALRVII 301

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           PPLTSQYLNL KNSSLA  +G+ D+VS+  GT++NQTGQAIE++ I M +YL++SI I+L
Sbjct: 302 PPLTSQYLNLAKNSSLAAGIGYPDMVSLFAGTVLNQTGQAIEVMAITMSVYLAISISISL 361

Query: 384 FMNRLNAKIALKEK 397
            MN  N +IAL E+
Sbjct: 362 LMNWYNKRIALTER 375


>gi|271498819|ref|YP_003331844.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270342374|gb|ACZ75139.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 392

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 161/394 (40%), Positives = 237/394 (60%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QI+  +++ V   + ++N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKGDLS----LTNPAVRAWLYQILAVIIVVVAAAYLLHNTVTNLSQRGITSGFAFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +  AGF I Q ++ Y  D +YA   ++G +NT  ++   +I A+++G +VG  RLS N L
Sbjct: 59  NNNAGFGIVQHLIDYDQDDTYARVFVIGLLNTLLVSAICIICASLLGFIVGLARLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P     
Sbjct: 119 LRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQAVNAFDTFFLSNRGLYIPAAEFG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + + ++ +  ++   R ++ +HE TG+      I   ++  L  L  +     L
Sbjct: 179 PGALPSLLALLISLGCAIALHRRNKRYHELTGQQRRYWPIPIAMLAVLLGLSHLVFGRAL 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H+D PVL  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA++LG
Sbjct: 239 HWDFPVLKGFNFSGGMVLIPELAALALALSVYTSSFIAEIIRSGIQSVSHGQHEAALSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L      R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPKPVTLRKVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLLMNIYNRKIALIER 392


>gi|197334738|ref|YP_002156346.1| general L-amino acid transport system permease protein AapQ [Vibrio
           fischeri MJ11]
 gi|197316228|gb|ACH65675.1| general L-amino acid transport system permease protein AapQ [Vibrio
           fischeri MJ11]
          Length = 388

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 173/385 (44%), Positives = 239/385 (62%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
                LY+     I  Q+I    L   F   VNN  +N+E   ++ G+GFL + AGF I 
Sbjct: 4   KNKNILYNPTFRAILFQVIAVAALVFFFYTIVNNALSNLESRGIATGLGFLDQEAGFGIG 63

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             +V Y    SY    +VG +NT  ++  G++ AT+ G  +G  RLS+N LV+    VY+
Sbjct: 64  LSLVEYDETYSYGRTFVVGLLNTALVSVLGILFATVFGFTIGIARLSSNWLVSRCAAVYI 123

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP+   +  + +   +
Sbjct: 124 ETFRNIPLLLQIFFWYFAVLQALPSPRQSLSLGESVFLNVRGLFFPSPIFEEGSNLIGIA 183

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            +  I+  LF ++ +++    TG+  P+L  S   +FGLPTL        +  + P L  
Sbjct: 184 VIAAIIFILFLSKWAKNKQRLTGQQTPVLRYSLLALFGLPTLAYFISGMPISIEYPELKG 243

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA+ALGL  ++  +L
Sbjct: 244 FNFRGGISIIPELAALVVALSVYTASFIAEIVRSGINAVSHGQTEAAMALGLPRKRTLKL 303

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 304 VVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMA 363

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +  MN  N+K+AL E+
Sbjct: 364 VYLTLSLLTSFLMNIYNSKVALVER 388


>gi|283836182|ref|ZP_06355923.1| general amino acid ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291067533|gb|EFE05642.1| general amino acid ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 393

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 157/380 (41%), Positives = 224/380 (58%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             +  V     Q++  + +  I ++ ++N  NN+    ++ G  FL   AGF I Q ++ 
Sbjct: 14  FSNPAVRAWLFQLLAVIAVISIAVYLIHNTINNLSSRGITSGFSFLDRSAGFGIVQHLID 73

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y    LVG +NT  ++   ++ A+ +G  +G  RLS N L+  +  VY+E FRN
Sbjct: 74  YEQGDTYGRVFLVGLLNTLLVSALCIVFASFLGFFLGLARLSDNWLLRKLSTVYIETFRN 133

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IPPL+ IFF Y +VL  LP P  ++     MFL+NRGL  P   M      F  + ++ I
Sbjct: 134 IPPLLQIFFWYFAVLRNLPGPRQAVNALDLMFLSNRGLYIPAPQMGEGLFAFCTAVLIAI 193

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            ++    R +R    KTG+       +  L   LP +        LH+D P L  FNF G
Sbjct: 194 AVTFGLFRFNRMHQIKTGQLRRTWPTALALFMFLPMISQWFFGAALHWDIPELRGFNFRG 253

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQ
Sbjct: 254 GMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQ 313

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +
Sbjct: 314 ALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLII 373

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S+ I+L MN  N +IAL E+
Sbjct: 374 SLSISLLMNIYNRRIALIER 393


>gi|261823405|ref|YP_003261511.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607418|gb|ACX89904.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 434

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 149/373 (39%), Positives = 225/373 (60%), Gaps = 1/373 (0%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
                Q +L LL+     W   NV  N+   N++ G GFL   A FEI + +V +T   S
Sbjct: 63  RAWIYQCLLGLLIVAFSYWLYANVVENLRSQNIATGFGFLDHTAQFEIGEKLVAFTPRDS 122

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A+ VG +NT ++   G++ AT++G  VG  R+S N L+A +   Y+E+ RNIP ++ 
Sbjct: 123 YLRALGVGLLNTLYVTLCGIVLATLLGFSVGIARVSRNWLLARLAGGYIEMMRNIPVILQ 182

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           + F    V+  LP P  +I L    FL NRGLSF          +   + +   ++SL  
Sbjct: 183 VIFW-SVVIRNLPSPRDAIELGSLGFLTNRGLSFAVPAAHHGWLLSGIALLAAALISLIL 241

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            R++R+  E  G++L    ++     GLP LV          D+P+L  FNF GG TVSP
Sbjct: 242 NRVARYIRESRGRSLSTGRLTLVAFIGLPLLVWWISGAPAELDRPILRGFNFRGGFTVSP 301

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           EF +L + ++ Y++AFIAEIVR+G+ ++P+GQ+EAA AL  +     R +++PQAMR I+
Sbjct: 302 EFTALLLGIALYSSAFIAEIVRAGIQSIPKGQLEAARALSFSPWHMMRHIIIPQAMRVIV 361

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTSQY++L KNSS+AV VG+ +L ++  T++NQTGQA+E+I I M +YL++SI+ +L 
Sbjct: 362 PPLTSQYVSLSKNSSIAVVVGYPELANISNTLMNQTGQALEVIAIMMVVYLTVSIVTSLL 421

Query: 385 MNRLNAKIALKEK 397
           MN  N  +A+KE+
Sbjct: 422 MNLFNRAVAIKER 434


>gi|316934241|ref|YP_004109223.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris DX-1]
 gi|315601955|gb|ADU44490.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris DX-1]
          Length = 401

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 156/398 (39%), Positives = 238/398 (59%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M  +AR    ++ ++++     R     +  Q++   +L  I    V+N  +N+    ++
Sbjct: 1   MAIDARPPPPQFVAKLRRALGGRSGWKGLIAQVLFVAVLCWIGYEIVDNARDNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY    SY    LVG VNT  ++  G++ AT+IG +V  GR
Sbjct: 61  SGFGFMSQTAGFGVSQTLIPYQESDSYTRVFLVGLVNTLLVSAVGIVIATVIGFMVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ L    FL+NRG+  
Sbjct: 121 LSPNWLISRIAGGYVEIVRNLPLLFQILFWYLAVLGTLPAPRQSVSLLDSFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ + ++ +  ++     +R     TGK + +  +   L+ GLP + + 
Sbjct: 181 PRPVGEAGLDGFLVAVLIAVTAAIALPLYARRRLFATGKPMRVWPVVIGLLIGLPLVAVA 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ PVL  FNF GGS + PEF++L +ALS YTAAFIAE+VR+G+++V +GQME
Sbjct: 241 IFGRPFSFEVPVLRGFNFAGGSRLPPEFVALTLALSTYTAAFIAEVVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+  +  RL+++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGQTLRLIVIPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIE+I I M +YL +S++ +  M+    +I   
Sbjct: 361 SQTGQAIEVIAITMGVYLLISLVTSALMSLYAWRINRS 398


>gi|293605349|ref|ZP_06687734.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816288|gb|EFF75384.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 380

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 167/379 (44%), Positives = 230/379 (60%), Gaps = 1/379 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             D     +  Q++   L+     + V+N  +N+   N++ G GFL+  AGF I + ++ 
Sbjct: 3   WNDPATRALVYQVLALTLVGASTWFLVHNTLHNLSMRNIATGFGFLNREAGFAIGESVIA 62

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    +Y  AI VG +NT  +    ++ AT++G L+G GRLS N LV  I  VYVEV RN
Sbjct: 63  YGPADTYGRAIFVGVLNTLRVGLLALVAATLLGVLIGIGRLSKNWLVKKITSVYVEVMRN 122

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P L+ +FF Y  +   +P P  +     G+F++NRGL  P L    +    +    L I
Sbjct: 123 VPLLLQLFFWYALITENMPGPRQAHNPLPGVFISNRGLKVPGLEG-ASLDWMLGGLALAI 181

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V  L          E TG+  PL   +  L+  LP L  +A    L  D P L  FNF+G
Sbjct: 182 VAILLLGHWGAKRQEATGRVFPLGRWAIGLLLALPALGWLASGASLTLDMPQLRGFNFVG 241

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T++PEF++L++ L+ YT+AFIAE+VRSG+ AV  GQ EAA +LGL   K  RLV+LPQ
Sbjct: 242 GLTLTPEFVALFLGLTVYTSAFIAEVVRSGIQAVNNGQWEAAGSLGLPRAKVLRLVVLPQ 301

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R IIPP+TSQYLNLLKNSSLAVA+G+ D+VSV  T +NQTGQAIE ILI M  YL++S
Sbjct: 302 ALRVIIPPMTSQYLNLLKNSSLAVAIGYPDIVSVVNTTLNQTGQAIEGILIIMGAYLTVS 361

Query: 379 IMIALFMNRLNAKIALKEK 397
           + I++FMN  N +IAL E+
Sbjct: 362 LSISIFMNWYNKRIALVER 380


>gi|238752137|ref|ZP_04613619.1| L-amino acid ABC transporter permease protein [Yersinia rohdei ATCC
           43380]
 gi|238709610|gb|EEQ01846.1| L-amino acid ABC transporter permease protein [Yersinia rohdei ATCC
           43380]
          Length = 392

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 163/395 (41%), Positives = 226/395 (57%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV   FS    L +  V     QII  L+L     + ++N   N+    ++ G  F
Sbjct: 2   SQRPTVKGAFS----LTNPAVRAWLYQIIALLILIGCGAYLLHNTLTNLSTRGITSGFAF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+  AGF I Q ++ Y    SY    LVG  NT  ++   +  A+I+G  +G  RLS N 
Sbjct: 58  LNNSAGFGIIQHLIDYQQGDSYGRVFLVGLFNTLLVSALCIFFASILGFFLGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  S+      FL+NRGL  P+   
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQSLEAFGVAFLSNRGLYLPSPEF 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   + + +L I L +   R +      TG+      I   L+  LP    +     
Sbjct: 178 AAGAIPALVAVLLAIALIIAIHRYNHFRQLHTGQFHRTWPIGVLLLIALPAGAQLISGPA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           LH++ P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 LHWNLPELQGFNFKGGLVLIPELAALTLALSVYTSTFIAEVIRSGIQSVPYGQHEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
            L +R   R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 ALPNRVTLRQVILPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+  MN  N +IAL E+
Sbjct: 358 AIETIAITMSVYLVISLSISFLMNLYNRRIALVER 392


>gi|163760314|ref|ZP_02167397.1| probable general l-amino acid transport permease abc transporter
           protein [Hoeflea phototrophica DFL-43]
 gi|162282713|gb|EDQ33001.1| probable general l-amino acid transport permease abc transporter
           protein [Hoeflea phototrophica DFL-43]
          Length = 402

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 169/390 (43%), Positives = 245/390 (62%), Gaps = 4/390 (1%)

Query: 12  YFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFE 71
              R+  + D +V  +  Q +L + +  +    ++N  +N+ ++ +S G GF  ERAGF+
Sbjct: 13  DSGRVSMMNDPKVRGLVFQGLLIIAVGAMVWSGISNAVDNLARAGISSGFGFFGERAGFD 72

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q  +PYT+DS+Y  A  VG +NT  +A  G+  ATIIG +VG  RLS N LV     +
Sbjct: 73  IGQAFIPYTNDSTYLRAFFVGLLNTMVVAIIGIFLATIIGFVVGLARLSKNYLVQKFATI 132

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF---LNNRGLSFPTLTMDTNAK 188
           YVEV RNIP L+ + F YK+VLS+LP P  + +         +NNRGL  P L  +  + 
Sbjct: 133 YVEVLRNIPLLLQLLFWYKAVLSILPSPRAAGLEAGAEVAFNINNRGLYIPRLVPEDGSS 192

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +  ++F + ++      R ++     TG+  P+      ++ GLP +  +     +  + 
Sbjct: 193 LIFYAFAIAVIAWFLIGRWAKKRQMATGQQFPVFLTGLAMVIGLPLVAFLVTGMPVSMEY 252

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L  FN +GG  + PEFM+L + LS YTAAFIAEIVR+G++AV RGQ EAA ALGL   
Sbjct: 253 ASLQGFNMVGGWVIQPEFMALLLGLSLYTAAFIAEIVRAGILAVSRGQTEAAFALGLRPN 312

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
             +RLV++PQAMR IIPPLTSQ+LNL KNSSLAVA+G+ DLVS+ GGT++NQTGQA+E+I
Sbjct: 313 LTSRLVIVPQAMRVIIPPLTSQFLNLTKNSSLAVAIGYPDLVSIFGGTVLNQTGQAVEVI 372

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I M +YL+LS++ + FMN  N+++AL E+
Sbjct: 373 SITMLVYLTLSLLTSAFMNWFNSRVALVER 402


>gi|315180249|gb|ADT87163.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 371

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 168/370 (45%), Positives = 230/370 (62%), Gaps = 1/370 (0%)

Query: 29  VQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATA 88
            Q+I    L   F   +NN   N+E   ++ G  FL + AGF I   ++ Y    SY   
Sbjct: 2   FQLIAIAALIFFFYTIINNALTNLESRGIATGFDFLDQPAGFGIGLTLIDYNETYSYGRT 61

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +VG +NT  ++  G+I AT+IG ++G  RLS+N LV+ +  VY+E FRNIP L+ IFF 
Sbjct: 62  FVVGLLNTALVSVLGIILATMIGFVLGIARLSSNWLVSRLAAVYIETFRNIPLLLQIFFW 121

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y +VL  LP P  S+ L   +FLN RGL FP    +  + + + +FV G++ S+     +
Sbjct: 122 YFAVLQALPSPRESMSLGEAVFLNVRGLFFPAPVFEPGSSVVLIAFVAGVIASIVINIWA 181

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
            +    TG+  P+  I   L  GLP +V   +   +    P L  FNF GG ++ PE  +
Sbjct: 182 NNKQRLTGQQTPMGRIVLVLCVGLPLIVYFIMGMPISAQYPELKGFNFRGGISIIPELAA 241

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL   K  +LV++PQA+R IIPPLT
Sbjct: 242 LLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLPRSKTLKLVVIPQALRIIIPPLT 301

Query: 329 SQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           SQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+LS++ +  MN 
Sbjct: 302 SQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMGVYLALSLITSALMNL 361

Query: 388 LNAKIALKEK 397
            N K+AL E+
Sbjct: 362 YNRKVALVER 371


>gi|288962139|ref|YP_003452434.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288914405|dbj|BAI75890.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 385

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 158/382 (41%), Positives = 227/382 (59%), Gaps = 1/382 (0%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           ++ L   RV     Q +       +  + V+N   N+    ++ G GFL   AGFEI + 
Sbjct: 5   VQALNSARVRGWLYQALFLACALAVAWYLVSNTLTNLATRGVATGFGFLHREAGFEIGES 64

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y++  +Y  A+ VG +NT  ++ +G+  AT++G L+G GRLS+N +V     +YVE 
Sbjct: 65  LLSYSASDTYLKALAVGLLNTLAVSAAGVALATVLGVLIGVGRLSSNWMVNRFATLYVET 124

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN+P L+ +   Y  +  + P P  ++ +  G+FL+NRG+ FP L         + + +
Sbjct: 125 VRNVPLLLQLVVWYTVMNRL-PSPREALEILPGIFLSNRGMKFPVLVEHAGHGWVLLALL 183

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
            GI  +    R  R   E TG+  P L I+   +   P    IA    L FD P L  FN
Sbjct: 184 AGIAAAFAVVRHGRRHREATGRPFPTLPIAIAAVLLPPAAAFIATGAPLAFDVPALAGFN 243

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG +V+PEF +L I LS YTA FIAEIVRSG++AVP GQ EA +ALGL+  +  RL++
Sbjct: 244 FEGGGSVTPEFTALLIGLSVYTAGFIAEIVRSGILAVPHGQTEAGLALGLSPGRILRLII 303

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R I+PPLTSQYLNL KNSSLAVA+G+ DLVSV  T  NQTGQ +E + + M +YL
Sbjct: 304 LPQALRVIVPPLTSQYLNLAKNSSLAVAIGYPDLVSVSNTSANQTGQVVEAVAMMMLVYL 363

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            +S+ I+ FMN  N ++AL  +
Sbjct: 364 VISLAISGFMNWYNRRVALVTR 385


>gi|144899135|emb|CAM75999.1| binding-protein-dependent transport system inner membrane component
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 394

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 157/389 (40%), Positives = 234/389 (60%), Gaps = 1/389 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           V +  +    +Y  R   I  Q+ +   +  +  + V+N   N+    ++ G GF+ + A
Sbjct: 7   VKQPATLRALVYSARFRGIVYQVAVVAGVLALGWYLVHNTLANLAARGIATGFGFMGQEA 66

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF+I +G++ Y++  +Y  A++VG +NT  +A  G+  A+++G +VG  RLS N LVA +
Sbjct: 67  GFDIGEGLIAYSAADTYLRALVVGVLNTLKVAVLGIALASLLGLVVGIARLSRNWLVARL 126

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
              YVE  RN+P L+ +F  Y  V   LP P  ++ L  G+F++NRGL  P      +  
Sbjct: 127 ATFYVETVRNVPLLLQLFVWYGIVT-ALPGPRQALDLGLGVFISNRGLKVPVPEWHDSYW 185

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + +       +      R + +   +TG+  P L +    +  LP L  +     L +  
Sbjct: 186 LAMLLLAAAFIGLFVLRRWAINRLYRTGRPFPWLSVGLAGLVVLPWLGFLLTGTPLVWSI 245

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FNF GG+ +SPEF +L   L+ YTA+FIAEIVRSG++AVP GQ EAA++LGL+  
Sbjct: 246 PELKGFNFQGGADLSPEFAALLAGLTVYTASFIAEIVRSGILAVPHGQTEAALSLGLSRA 305

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           K  RLV+LPQA+R I+PPLTSQYLNLLKNSSLAVA+G+ DLVSV  T INQTGQA+E + 
Sbjct: 306 KTLRLVVLPQALRVIVPPLTSQYLNLLKNSSLAVAIGYPDLVSVANTAINQTGQAVEGVA 365

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M ++L +S+ ++L MN  NAK+AL  +
Sbjct: 366 LTMAVFLVISLALSLLMNWYNAKVALVSR 394


>gi|153839317|ref|ZP_01991984.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AQ3810]
 gi|149747149|gb|EDM58137.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AQ3810]
          Length = 401

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 172/395 (43%), Positives = 242/395 (61%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
            +  T+++       +Y+    +   QII    L   F   +NN  NN++   ++ G GF
Sbjct: 7   TSPSTMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIINNALNNLDARGIATGFGF 66

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L++ AGF I   ++ Y    SY    +VG +NT  ++  G+I AT IG  +G  RLS N 
Sbjct: 67  LNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNTALVSVLGIILATAIGFTMGVARLSTNW 126

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           LV+ +  VY+E FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    
Sbjct: 127 LVSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVF 186

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +  + + + +FV+G++ ++  +  +R+    TG+  P+  I   L+ GLP LV       
Sbjct: 187 NEGSGVVIAAFVIGLIATISISIWARNKQRLTGQQTPMGRIGLGLLVGLPLLVYFVSGMP 246

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  + P L  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++L
Sbjct: 247 ISLEYPELKGFNFKGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSL 306

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQ
Sbjct: 307 GLPRAKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQ 366

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 367 AIEIIAMTMGVYLTLSLLTSALMNLYNRKVALVER 401


>gi|302062365|ref|ZP_07253906.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
          Length = 362

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 148/362 (40%), Positives = 224/362 (61%), Gaps = 1/362 (0%)

Query: 37  LTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNT 96
           +     +  +N   N++   ++ G GFL   AGF I Q ++ Y+   +YA   ++G +NT
Sbjct: 1   MIAFGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLIDYSESDTYARVFVIGLLNT 60

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             ++  G++ AT++G ++G  RLS N +++ +  VYVEVFRNIPPL+ I F Y +V   L
Sbjct: 61  LLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRNIPPLLQILFWYTAVFLTL 120

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           P P  +       ++++RGL+ P       A  F+ S V+ ++  +   R +    E TG
Sbjct: 121 PGPRQAHGYLDMFYVSSRGLNMPGALPAEGAWAFLISIVVAVIAVVMMVRWANKRFEATG 180

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +     ++   L+  +P L ++     +H++ P L  FNF GG  + PE +SL +AL+ Y
Sbjct: 181 QPFHKFWVGLALLLAIPGLSMLIFGSPVHWELPQLKGFNFTGGWVLIPELISLTLALTIY 240

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAAFIAEIVRSG+ +V  GQ EAA +LGL      R V++PQA+R IIPPLTSQ+LNL K
Sbjct: 241 TAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQALRVIIPPLTSQFLNLAK 300

Query: 337 NSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           NSSLA A+G+ ++VS+  GT++NQTGQAIE+I I M +YL++SI I++ MN  N +IAL 
Sbjct: 301 NSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAISISISMLMNWYNKRIALI 360

Query: 396 EK 397
           E+
Sbjct: 361 ER 362


>gi|328473627|gb|EGF44462.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 10329]
          Length = 401

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 172/395 (43%), Positives = 241/395 (61%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
            +  T+++       +Y+    +   QII    L   F   +NN  NN++   ++ G GF
Sbjct: 7   TSPSTMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIINNALNNLDARGIATGFGF 66

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L + AGF I   ++ Y    SY    +VG +NT  ++  G+I AT IG  +G  RLS N 
Sbjct: 67  LKQEAGFGIGLTLIEYNETYSYGRTFIVGLLNTALVSVLGIILATAIGFTMGVARLSTNW 126

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           LV+ +  VY+E FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    
Sbjct: 127 LVSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVF 186

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +  + + + +FV+G++ ++  +  +R+    TG+  P+  I   L+ GLP LV       
Sbjct: 187 NEGSGVVIAAFVIGLIATISISIWARNKQRLTGQQTPMGRIGLGLLVGLPLLVYFVSGMP 246

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  + P L  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++L
Sbjct: 247 ISLEYPELKGFNFKGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSL 306

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQ
Sbjct: 307 GLPRAKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQ 366

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 367 AIEIIAMTMGVYLTLSLLTSALMNLYNRKVALVER 401


>gi|188532410|ref|YP_001906207.1| Hypothetical amino-acid ABC transporter permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188027452|emb|CAO95299.1| Hypothetical amino-acid ABC transporter permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 392

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 163/395 (41%), Positives = 230/395 (58%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R  V R FS         V     QI+  + + ++  + ++N  NN+    ++ G GF
Sbjct: 2   SPRPAVKREFSLGH----PAVRAWLFQIVAVVAVLMVAGYLIHNTINNLASRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ YT   SYA   LVG  NT  ++   +  A+++G  VG  RLS N 
Sbjct: 58  LERSAGFGIVQHLIDYTEGDSYARVFLVGLTNTLLVSALCIFFASLLGFFVGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  VYVE FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P    
Sbjct: 118 LLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAFVSNRGLYVPWPEY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+ + +L I ++    R ++ +  KTG+       +   +   P +  +     
Sbjct: 178 AAGTVPFLLALLLAIAVTTVLFRYNKQYQLKTGRQRRTWPAAVATLVMFPLVAFLLAGSP 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDVPQLRGFNFRGGFVLIPELAALTLALSIYTSTFIAEVIRSGIQSVPHGQHEAASSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL H    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GLPHAATLRQVIIPQAMRVIIPPLTSQYLNVVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 358 AIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|28898395|ref|NP_798000.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260366019|ref|ZP_05778497.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus K5030]
 gi|260876626|ref|ZP_05888981.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AN-5034]
 gi|260898002|ref|ZP_05906498.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus Peru-466]
 gi|28806612|dbj|BAC59884.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308088046|gb|EFO37741.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus Peru-466]
 gi|308094314|gb|EFO44009.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AN-5034]
 gi|308114200|gb|EFO51740.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus K5030]
          Length = 401

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 171/395 (43%), Positives = 241/395 (61%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
            +  T+++       +Y+    +   QII    L   F   +NN  NN++   ++ G GF
Sbjct: 7   TSPSTMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIINNALNNLDARGIATGFGF 66

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L++ AGF I   ++ Y    SY    +VG +NT  ++  G+I AT IG  +G  RLS N 
Sbjct: 67  LNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNTALVSVLGIILATAIGFTMGVARLSTNW 126

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           LV+ +  VY+E FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    
Sbjct: 127 LVSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVF 186

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +  + + + +F +G++ ++  +  +R+    TG+  P+  I   L+ GLP LV       
Sbjct: 187 NEGSGVVIAAFAIGLIATISISIWARNKQRLTGQQTPMGRIGLGLLVGLPLLVYFVSGMP 246

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  + P L  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++L
Sbjct: 247 ISLEYPELKGFNFKGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSL 306

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQ
Sbjct: 307 GLPRAKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQ 366

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 367 AIEIIAMTMGVYLTLSLLTSALMNLYNRKVALVER 401


>gi|326797352|ref|YP_004315172.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326548116|gb|ADZ93336.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 390

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 159/384 (41%), Positives = 232/384 (60%), Gaps = 2/384 (0%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
              FL D     +  Q +L  ++  +  +  +N+  N+E   +S G  FL+E AGF +  
Sbjct: 8   NTSFLNDAGNRALIFQAVLLAVVVFVGYYLFSNLQANLETRGISTGFSFLNEPAGFPVLI 67

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++ YT   +Y  A  V  +NTF ++  G+I AT+IG ++G  RLS N LVA +  VY+E
Sbjct: 68  HLIEYTEADTYGRAFAVALINTFVISLLGIILATVIGVIMGLARLSNNWLVARLATVYIE 127

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
             RNIP L+ +FF Y +VL+ +P P +SIV     F+N RG+  P       +   + +F
Sbjct: 128 TLRNIPLLLQMFFWYFAVLAAMPHPRNSIVFGD-FFINKRGIYSPNPQFQDGSGFVLAAF 186

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +L IV + F  R ++   + TG   P  + S   I G+  L  +   + + FD P   +F
Sbjct: 187 LLSIVGAFFIVRWAKARQKATGNWFPAYWASFGTIIGVTLLAFVVTGFPVEFDLPSKSRF 246

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N  GG  + PEF+++ IALS YT +FIAEIVR+G+++V  GQ EA+ +LGL   K  RL+
Sbjct: 247 NVTGGMVLVPEFVAVLIALSTYTGSFIAEIVRAGILSVNWGQTEASRSLGLPDGKTQRLI 306

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFI 373
           +LPQA+R IIPPLTSQYLNL KNSSL  A+ + +LV+ V GT +NQTGQAIE I + M +
Sbjct: 307 VLPQALRVIIPPLTSQYLNLAKNSSLGAAIAYPELVAVVMGTTLNQTGQAIETIGLCMLV 366

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           Y SLS+ I+LFMN  N +++L E+
Sbjct: 367 YGSLSLSISLFMNWYNKRMSLVER 390


>gi|319957435|ref|YP_004168698.1| amino acid ABC transporter membrane protein 1, paat family
           [Nitratifractor salsuginis DSM 16511]
 gi|319419839|gb|ADV46949.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Nitratifractor salsuginis DSM 16511]
          Length = 384

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 159/383 (41%), Positives = 232/383 (60%), Gaps = 1/383 (0%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
             FL D ++  I  QII   L      +   N  +N+E+  +  G  FL + AGF+I + 
Sbjct: 2   PSFLRDEKIRGILYQIIAITLFVGFLFYIAQNTAHNIEQRGIKTGFAFLHDTAGFDITES 61

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            +P+T  S++     VG +NT  ++F G++ +++IG L+G  RLS N L+  I   Y+E 
Sbjct: 62  PIPFTPASTHLKVFEVGLLNTLIVSFWGIVFSSLIGLLIGIWRLSPNWLINRIAAAYIET 121

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRNIP L+ I F Y  VL+ LP   HS+     +F+NNRG   P L     A +   + V
Sbjct: 122 FRNIPVLLQILFWYNVVLATLPSTRHSLNFFNAVFINNRGFFMPKLVFQDGAWMIGAAIV 181

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
             I+  +F  R ++   E+TG+  P+      L+ GLP L  +     +    P L  FN
Sbjct: 182 AAIIGIIFVHRWAKKRQEETGEQFPVFLTGIILLIGLPLLAYLIAGRPVTAVYPELHGFN 241

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG T +PEF++L  ALS YTA FIAE +RSG+ AVP+GQ EAA +LGL+  +  RLV+
Sbjct: 242 FRGGKTFTPEFLALLFALSIYTATFIAEAIRSGIEAVPKGQKEAATSLGLSPLQQLRLVI 301

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           LPQA+R  IP + +QYLNL+KNSSLA A+G+ +LV++  GT +NQTGQA+EI+LI M  Y
Sbjct: 302 LPQAVRIAIPSIINQYLNLIKNSSLAAAIGYPELVTIFAGTSLNQTGQALEILLITMLTY 361

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L +S++++L +N  NAK+ +KE+
Sbjct: 362 LLISLIVSLILNWFNAKMKIKER 384


>gi|261342746|ref|ZP_05970604.1| general amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315399|gb|EFC54337.1| general amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 393

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 159/377 (42%), Positives = 224/377 (59%), Gaps = 1/377 (0%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
             V     QII  + + VI  + ++N   N+    ++ G  FL   AGF I Q ++ Y  
Sbjct: 17  PAVRAWLFQIIAVIAVVVIAAYLIHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQE 76

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +   Y+E FRNIPP
Sbjct: 77  GDTYGRVFVVGLLNTLLVSALCIVFASLLGFFIGLARLSDNWLLRKLSTFYIETFRNIPP 136

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ IFF Y +VL  LP P  ++     +FL+NRGL  P+         FV +  L +V+S
Sbjct: 137 LLQIFFWYFAVLRNLPGPRQAVDAFDLLFLSNRGLYIPSPQFAEGIYAFVIAIALALVIS 196

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
               R +R    KTG+       +  LI  LP          LH+D P L  FNF GG  
Sbjct: 197 GGLFRYNRKHQVKTGQLRKTWPFALALIVVLPWAARGLFGAALHWDVPHLRGFNFQGGMV 256

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R
Sbjct: 257 LIPELAALTLALSIYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNTVTLRQVIIPQALR 316

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I I M +YL +S++
Sbjct: 317 VIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAITMSVYLIISLI 376

Query: 381 IALFMNRLNAKIALKEK 397
           I+L MN  N +IAL E+
Sbjct: 377 ISLLMNLYNRRIALVER 393


>gi|260901585|ref|ZP_05909980.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AQ4037]
 gi|308108542|gb|EFO46082.1| general L-amino acid transport system permease protein AapQ [Vibrio
           parahaemolyticus AQ4037]
          Length = 401

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 170/395 (43%), Positives = 240/395 (60%), Gaps = 1/395 (0%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
            +  T+++       +Y+    +   QII    L   F   +NN  NN++   ++ G GF
Sbjct: 7   TSPSTMSKPSGSKSLIYNPAFRSAIFQIIAIAALVFFFYTIINNALNNLDARGIATGFGF 66

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L++ AGF I   ++ Y    SY    +VG +NT  ++  G+I  T IG  +G  RLS N 
Sbjct: 67  LNQEAGFGIGLTLIEYNETYSYGRTFIVGLLNTALVSVLGIILTTAIGFTMGVARLSTNW 126

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           LV+ +  VY+E FRNIP L+ IFF Y +VL  LP    S+ L   +FLN RGL FP    
Sbjct: 127 LVSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPVF 186

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +  + + + +F +G++ ++  +  +R+    TG+  P+  I   L+ GLP LV       
Sbjct: 187 NEGSGVVIAAFAIGLIATISISIWARNKQRLTGQQTPMGRIGLGLLVGLPLLVYFVSGMP 246

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  + P L  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++L
Sbjct: 247 ISLEYPELKGFNFKGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSL 306

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL   K  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQ
Sbjct: 307 GLPRAKTLKLVVIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQ 366

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIEII + M +YL+LS++ +  MN  N K+AL E+
Sbjct: 367 AIEIIAMTMGVYLTLSLLTSALMNLYNRKVALVER 401


>gi|296272120|ref|YP_003654751.1| binding-protein-dependent transporter inner membrane component
           [Arcobacter nitrofigilis DSM 7299]
 gi|296096295|gb|ADG92245.1| binding-protein-dependent transport systems inner membrane
           component [Arcobacter nitrofigilis DSM 7299]
          Length = 393

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 161/397 (40%), Positives = 246/397 (61%), Gaps = 5/397 (1%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           +K  +KTV      + F  + ++  I  QI+    + +   + ++N++ N+EK  ++ G 
Sbjct: 1   MKEHKKTV----KGVAFYNNPKIRAIIYQILALAAIFLFTYYVLHNMFINIEKRGINTGF 56

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FL   AGF I   ++PYT   +Y    ++G +NT  ++  G+  +TIIG LVG GRLS 
Sbjct: 57  DFLGNEAGFGIISTLIPYTESDTYGRVFIIGILNTLLVSGIGIFFSTIIGLLVGIGRLSK 116

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           N +++ +C VYVE FRNIP L+ I F Y  VL+ LP P  S+      FLNNRGL  P  
Sbjct: 117 NFMISKLCLVYVETFRNIPILLQILFWYNVVLAALPGPRQSMSYMDAFFLNNRGLYIPRP 176

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
            +++     + +F++ I   ++  + ++  H++TG+  P+ + S  ++   P LV     
Sbjct: 177 ILESGFMSVIIAFLIAIAAVVYLAKWAKKKHDETGEEFPVFWTSLVILIASPVLVYFVSG 236

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                +   L  FNF+GG T +PE ++L  ALS Y A +IAE VR+G+ AVP+GQ EAA 
Sbjct: 237 SPATLEYAQLKGFNFVGGWTFTPELLALSFALSIYPATYIAEAVRAGIEAVPKGQKEAAN 296

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360
           +LGL +    R V+LPQA+R IIPP+ +QYLNL+KNSSLA A+G+ +LV++  GT +NQ 
Sbjct: 297 SLGLKNHIILRKVVLPQALRVIIPPVINQYLNLMKNSSLATAIGYPELVTLFAGTALNQV 356

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQAIEIIL+ M +YL++SI+I++ MN +NAKI +KE+
Sbjct: 357 GQAIEIILMTMAVYLTISILISIVMNFINAKIQIKER 393


>gi|307129010|ref|YP_003881026.1| putative transport system permease [Dickeya dadantii 3937]
 gi|306526539|gb|ADM96469.1| Putative transport system permease protein [Dickeya dadantii 3937]
          Length = 392

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 159/394 (40%), Positives = 234/394 (59%), Gaps = 5/394 (1%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R TV    S    L +  V     QI+  +++ V   + ++N   N+ +  ++ G  FL
Sbjct: 3   QRPTVKGDLS----LTNPAVRAWLYQILAVVIVVVTVGYLLHNTVTNLAQRGITSGFAFL 58

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +  A F I Q ++ Y    +YA   +VG +NT  ++   ++ A+++G +VG  RLS N L
Sbjct: 59  NNSADFGIVQHLIDYEQGDTYARVFVVGLLNTLLVSAICIVCASLLGFIVGLARLSDNWL 118

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P     
Sbjct: 119 LRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQAVNALDTFFLSNRGLYIPAAEFG 178

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + + ++ +V+     R ++ +H  TG+      I   ++  L  L  +     L
Sbjct: 179 PGALPSILALIIALVVGAMIFRRNKRYHALTGQQRRSWPIPLAVLVVLLGLSHLIFGRAL 238

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H+D PVL  FNF GG  + PE  +L +ALS YT++FIAEI+RSG+ +V  GQ EAA++LG
Sbjct: 239 HWDFPVLKGFNFSGGMVLIPELAALALALSVYTSSFIAEIIRSGIQSVSYGQHEAALSLG 298

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L      R V+LPQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQA
Sbjct: 299 LPKPVTLRKVILPQALRVIIPPLTSQYLNVVKNSSLAAAIGYPDMVSLFAGTVLNQTGQA 358

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE I I M +YL +S++I+L MN  N KIAL E+
Sbjct: 359 IETIAITMSVYLIISLLISLLMNIYNRKIALIER 392


>gi|323698173|ref|ZP_08110085.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio sp. ND132]
 gi|323458105|gb|EGB13970.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio desulfuricans ND132]
          Length = 383

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 159/372 (42%), Positives = 225/372 (60%)

Query: 26  NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSY 85
            +  Q++L   +  + L   +N   N+E  N++ G  FLS   G  I+  ++PYT   +Y
Sbjct: 12  ALLTQVLLIGAILYVALQLFHNTQANLEARNIASGFRFLSVEGGLPINDSLLPYTPADTY 71

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A LVG VNT +++   ++ ATI+G LVG  R+S N LVA +  VYVEV RNIP L+ +
Sbjct: 72  GRAFLVGIVNTLFVSALSIVLATILGVLVGVARVSTNWLVAKLAAVYVEVLRNIPLLLTL 131

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           FF Y ++L+ LP P  S+     +F+NNRG+  P   +       + + V  +  S+F  
Sbjct: 132 FFCYSTLLAFLPSPRKSLTPFGDIFINNRGVFVPRPILQDGMGWVLLALVAAVAASIFLV 191

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R ++   ++TG A    +IS  L+ GLP          L FD PVL  FNF GG  + PE
Sbjct: 192 RAAKRMRDETGNAPRAGWISLGLVLGLPLAAYYLAGRPLAFDVPVLKGFNFKGGMILRPE 251

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +L I L  YTAAFI E VRSG+ +V +GQ+EAA ALGL      R V+LPQ +R  IP
Sbjct: 252 FTALLIGLVLYTAAFIGENVRSGIQSVDKGQLEAAKALGLKPGVIMRKVILPQTLRVCIP 311

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             T+ Y +L+KNSSLAVA+G+ D+VS+GGTII Q  QAIEII +WM +YL++++ ++L M
Sbjct: 312 ATTNDYTSLVKNSSLAVAIGYPDMVSIGGTIIGQNDQAIEIIGMWMAVYLTINLAVSLVM 371

Query: 386 NRLNAKIALKEK 397
           N  NAK+ L E+
Sbjct: 372 NWFNAKVQLVER 383


>gi|89070521|ref|ZP_01157810.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Oceanicola granulosus HTCC2516]
 gi|89043828|gb|EAR50026.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Oceanicola granulosus HTCC2516]
          Length = 424

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 147/396 (37%), Positives = 222/396 (56%), Gaps = 6/396 (1%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F   + +YD R  ++++Q++  +LL +   W V+N   N+         GFL++ 
Sbjct: 29  PPPERFRLSQLIYDSRYRSLTIQVVAMVLLVLALSWLVSNTIQNLAALGKDFNFGFLTQS 88

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q ++PY +  S+  A LVG +NT  +AF G + ATIIGT+ G  RLS N +V  
Sbjct: 89  AGYDINQRLIPYDNQMSHGRAALVGILNTILVAFLGCVTATIIGTIAGVLRLSKNWIVGR 148

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS-----IVLPFGMFLNNRGLSFPTLT 182
           +  VYVE FRN+P L+ I  ++  V   +P P         ++   + +  +G   P   
Sbjct: 149 LMTVYVEAFRNVPLLLWIILIFAIVNESMPHPRDFGSGDVPMVFGSIAITRQGTWIPAPV 208

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +  +      F   +V      R +R   E TG+  P+ ++S  L      +    L  
Sbjct: 209 FENLSGALFIVFAASLVAIALYRRWARKRQEATGQISPVFWVSLGLFVLPTVIAYFLLGM 268

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  D P  G+F F GG  +    ++L++ALS YT AFIAEIVR G++A+ +GQ EAA A
Sbjct: 269 PVSLDYPEPGRFRFDGGLLIRNSLIALWLALSLYTGAFIAEIVRGGILAISKGQSEAAYA 328

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVGGTIINQTG 361
           LGL   +   LV+LPQAMR I+PPL SQ+LNL KNSSLA+AVG+ D   ++GG  INQTG
Sbjct: 329 LGLRPNRTMNLVILPQAMRVIVPPLISQFLNLTKNSSLAIAVGYMDARATLGGITINQTG 388

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +E +L+    YL LS++I+  MN  N ++ LKE+
Sbjct: 389 RELEGMLLLGLFYLVLSLVISAVMNVYNNRVKLKER 424


>gi|222085839|ref|YP_002544370.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221723287|gb|ACM26443.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 396

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 187/390 (47%), Positives = 261/390 (66%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
           +     S    +Y+ +V  +  Q++  ++L     + V N+ +N+  SN S G  FL+ R
Sbjct: 7   SPEGERSFASAIYNPKVRGLFYQVLTVIILVAAAWFIVQNIIDNLRASNQSFGFSFLTGR 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF + Q ++P++SDS+   A++VG +NT  ++  G+I ATIIG L+G GRLS N L+A 
Sbjct: 67  AGFNLGQALLPFSSDSTNTQALIVGLLNTIVISICGIIAATIIGFLIGIGRLSKNWLIAK 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +C+ YVE+FRNIPPL+VIFF Y  VL +LP    ++ LPF  +L+NRGL+FP+       
Sbjct: 127 LCQAYVELFRNIPPLLVIFFWYSGVLVLLPQARDALHLPFSSYLSNRGLAFPSPIFGAGM 186

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                + V+ IV   F  R +      TG+    +++S  LI GLP L  +     L FD
Sbjct: 187 WAVGAAIVIAIVAVFFLARWAHRRQAATGQQFHTIWVSIALIVGLPLLTFLVSGRPLSFD 246

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PV G+FN  GG  V PEF+SL++ALS YTA+FIAEIVR G+  V +GQ EAA ALGL  
Sbjct: 247 YPVAGKFNLTGGFVVGPEFISLFLALSFYTASFIAEIVRGGIRGVAKGQSEAASALGLRS 306

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
              TRL+++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ADLV+VGG I+NQ+G+AIE++
Sbjct: 307 SAITRLIVIPQALRIIIPPLTSQYLNLTKNSSLAIAIGYADLVAVGGVILNQSGRAIEVV 366

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +IWM +YL+LSI+ +LFMN  NAK+AL E+
Sbjct: 367 IIWMIVYLTLSIVTSLFMNWFNAKMALVER 396


>gi|259906954|ref|YP_002647310.1| amino-acid ABC transporter permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224962576|emb|CAX54031.1| amino-acid ABC transporter permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283476748|emb|CAY72584.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 392

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 228/395 (57%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R  V R FS         V     QI+  + + ++  + ++N  NN+    ++ G  F
Sbjct: 2   SPRPAVKRDFSFSH----PAVRAWLFQIVAVVAVLIVAGYLIHNTTNNLASRGITSGFSF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ Y+   SYA   LVG  NT  ++   ++ A+++G  VG  RLS N 
Sbjct: 58  LERNAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSALCIVFASLLGFFVGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  VYVE FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P    
Sbjct: 118 LLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQALHAFDLAFVSNRGLYIPWPEY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+ + +L   +S    R ++    KTG+       +  ++   P   ++     
Sbjct: 178 SAGTVPFLLALLLATAISTALFRYNKQHQLKTGRLRRTWPATVAMLALFPLAAILLAGSP 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDIPQLRGFNFRGGFVLIPELAALTLALSIYTSTFIAEVIRSGIQSVPYGQHEAASSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL H      V++PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GLPHTVTLHQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 358 AIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|163793103|ref|ZP_02187079.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
 gi|159181749|gb|EDP66261.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
          Length = 399

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 154/398 (38%), Positives = 239/398 (60%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           + K +    +R  S  ++L+D RV ++  Q I+A+++  +  +   N   N++   +S G
Sbjct: 4   LEKGSPHRASRSLS--EWLHDERVRSVLYQAIVAIVVIAVARYLFINTSENLQARGMSAG 61

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             FLS  AGF I   ++PYT+  SY    LVG  NT  +AF  +I  T++G LVG  RLS
Sbjct: 62  FDFLSTGAGFSIAWSVLPYTAGDSYFHVYLVGIGNTLMVAFVAIICTTLLGFLVGIMRLS 121

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N L+A +   YVE+ RN P L+ I F + +V S+LP P+ S+ L    +LNNRGL  P 
Sbjct: 122 KNWLIAQVASWYVEILRNTPLLLQILFWFLAVFSLLPRPNKSLSLLDLFYLNNRGLYIPA 181

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                   I + + ++ +  +      +R  H  TG+  P  +    ++FGLP LV +  
Sbjct: 182 PVPGDGFNITLIAVLVAVGATYAQAVWARKRHFDTGQRFPAFWTGLGILFGLPLLVFLVT 241

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L FD P L  FNF+GG++V P F +L +AL  Y +A++AE VR+G+++V  GQ EAA
Sbjct: 242 GAPLTFDYPALKGFNFLGGASVPPAFCALLLALVIYHSAYMAEAVRAGIMSVSHGQTEAA 301

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
            +LGL      RLV++PQAMR+++PP+ S ++N++KNSSLA+A+G+ DLV+V   T +NQ
Sbjct: 302 YSLGLRPGMTLRLVIIPQAMRAVVPPMISNWMNVVKNSSLAIAIGYPDLVAVYMQTSLNQ 361

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G AIEI+ + M  Y+S+S+ I++ +N  N  + LKE+
Sbjct: 362 SGHAIEIVAMVMLFYMSVSLSISMALNYYNKIVQLKER 399


>gi|310766169|gb|ADP11119.1| amino-acid ABC transporter permease protein [Erwinia sp. Ejp617]
          Length = 392

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 228/395 (57%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R  V R FS         V     QI+  + + ++  + ++N  NN+    ++ G  F
Sbjct: 2   SPRPAVKRDFSFSH----PAVRAWLFQIVAVVAVLIVAGYLIHNTTNNLASRGITSGFSF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ Y+   SYA   LVG  NT  ++   ++ A+++G  VG  RLS N 
Sbjct: 58  LERNAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSALCIVFASLLGFFVGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  VYVE FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P    
Sbjct: 118 LLRKLSTVYVETFRNIPPLLQIFFWYFAVLRNLPGPRQALHAFDLAFVSNRGLYIPWPEY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+ + +L   +S    R ++    KTG+       +  ++   P   ++     
Sbjct: 178 SAGTVPFLLALLLATAISTALFRYNKQRQLKTGRLRRTWPATVAMLALFPLAAILLAGSP 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDIPQLRGFNFRGGFVLIPELAALTLALSIYTSTFIAEVIRSGIQSVPLGQHEAASSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL H      V++PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GLPHTVTLHQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 358 AIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|307546908|ref|YP_003899387.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307218932|emb|CBV44202.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 392

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 174/385 (45%), Positives = 238/385 (61%), Gaps = 1/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            R     D  V  + +Q IL L L       V N   N+E   ++ G GFL ERAGF I 
Sbjct: 8   ERGPLWRDPAVRALVIQAILLLALLGFIAMIVTNTLANLEARGITTGFGFLQERAGFSIP 67

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q ++ Y+ DSSYA   +VG +NT  ++  G++ ATIIG  VG  RLS+N L+A +   YV
Sbjct: 68  QTLIDYSGDSSYARTFVVGLLNTLLVSGMGIVAATIIGFAVGISRLSSNWLLAKLAAAYV 127

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRNIP LV I F Y +VL  LP P  S+ L    FLN RGL  P           +++
Sbjct: 128 EIFRNIPLLVQILFWYFAVLQALPSPRQSLSLFEAFFLNVRGLVVPAPDPLPGFSATLWA 187

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            +L ++L +  +  +R    +TGK LP+  +   ++ GLP  V +     L ++ P L  
Sbjct: 188 LLLAVILVVVLSVYARRRQSRTGKPLPVFRLGALILIGLPLAVFLVTGRPLAWEVPALTG 247

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG TV PE ++L++ALS YTA+FIAEIVRSG+ +VP+GQ+EAA A+ L      R 
Sbjct: 248 FNFKGGVTVIPELVALWLALSIYTASFIAEIVRSGIQSVPQGQVEAARAISLPGDVTLRK 307

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           +++PQAMR I+P LTSQYLNL KNSSLA A+G+ DLV+V  GT +NQTGQAIEI+ I M 
Sbjct: 308 IVIPQAMRVIVPQLTSQYLNLTKNSSLATAIGYPDLVAVFAGTALNQTGQAIEIVAITMA 367

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL +S++++  MN  NA+  LKE+
Sbjct: 368 VYLLISLVVSALMNLYNARTLLKER 392


>gi|92117598|ref|YP_577327.1| amino acid ABC transporter permease [Nitrobacter hamburgensis X14]
 gi|91800492|gb|ABE62867.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 401

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 163/398 (40%), Positives = 235/398 (59%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVH--NISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M    RK   + F +++     R     +++Q++    L  I    V N   N+E  +++
Sbjct: 1   MAAEPRKPPLQLFLKLRRALGGRAGWDGLALQVLFVAALAWIGYEIVANARGNLETQHVA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G  F+S  AGF + Q ++PY+   +Y    LVG +NT  +A  G+  ATIIG +V  GR
Sbjct: 61  SGFDFMSRTAGFGVSQSLIPYSETDTYTRVFLVGLLNTLLVAVVGIFFATIIGFIVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ +    FLNNRGL  
Sbjct: 121 LSPNWLISRISGGYVELVRNLPLLFQILFWYLAVLGALPSPRQSVSIFDSFFLNNRGLVI 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P           + + V  IV  L     SR    ++G+ + +    + L+ G+P  V++
Sbjct: 181 PKPIGHEGLVALMIAIVAAIVGCLLLRSYSRRALFQSGRVVIVWPYVSTLLVGVPLAVMM 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ PVL  FNF GG+ V+PEF++L IALS YTAAFIAE+VR+G+++V +GQME
Sbjct: 241 IFGAPFTFEMPVLKGFNFSGGARVTPEFVALAIALSTYTAAFIAEVVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RL+++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGSTLRLIVVPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIEII I M +YL +S++ +  M+    ++A  
Sbjct: 361 SQTGQAIEIIAITMGVYLLISLVTSTIMSFYGWRLARS 398


>gi|152998389|ref|YP_001343224.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150839313|gb|ABR73289.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 391

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 159/385 (41%), Positives = 230/385 (59%), Gaps = 2/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S   FL D     +  QI+L  ++     +  +N+  N++   +S G  F +E AGF I 
Sbjct: 8   SNNSFLNDAGNRALIFQILLLAMVVFAGYYLFSNLQANLDNRGISTGFSFFNEPAGFPIL 67

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ YT  ++Y  A +V  +NTF ++  G+I ATIIG ++G  RLS N LVA +  VY+
Sbjct: 68  IHLIEYTEANTYGRAFVVALINTFVISLLGIILATIIGVIMGLARLSKNWLVARLATVYI 127

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E  RNIP L+ +FF Y +VL+ LP P  S      +  N RG+  P   +     + +F 
Sbjct: 128 ETLRNIPLLLQMFFWYFAVLAALPAPRDSYEFADFLL-NKRGIYSPNPLIQDGFGLVIFG 186

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F+L IV S+     ++    +TG   P  + S  +I G+  + L    + + FD P   +
Sbjct: 187 FILSIVASIGVIIWAKKRQTRTGLWFPAYWTSLGVIVGITFIFLAMAGFPIEFDLPQKSR 246

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN  GG  + PEF+++ +ALS YT AFIAEIVR+G+++V  GQ EAA +LGL      RL
Sbjct: 247 FNVTGGMVLPPEFVAVLVALSTYTGAFIAEIVRAGILSVNWGQTEAARSLGLRDSMTQRL 306

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMF 372
           ++LPQA+R IIPPLTSQYLNL KNSSL  A+ + +LV+ V GT +NQTGQAIE I + M 
Sbjct: 307 IVLPQALRVIIPPLTSQYLNLAKNSSLGAAIAYPELVAVVMGTTLNQTGQAIETIGLCML 366

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +Y SLS+ I++FMN  N K++L E+
Sbjct: 367 VYGSLSLSISVFMNWYNNKMSLIER 391


>gi|90409067|ref|ZP_01217192.1| ABC-type amino acid transport system, permease component
           [Psychromonas sp. CNPT3]
 gi|90309824|gb|EAS37984.1| ABC-type amino acid transport system, permease component
           [Psychromonas sp. CNPT3]
          Length = 394

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 161/382 (42%), Positives = 236/382 (61%), Gaps = 2/382 (0%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
           FL   +   I  Q++  L++     +  NN+++N++   ++ G  FL   AGF I Q ++
Sbjct: 13  FLNSPKNRAIIYQVVALLIVVFFAYYFANNMFSNVQNRGITTGFSFLEHTAGFGISQTLI 72

Query: 78  PYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           PY    SSY    +VG +NT  ++  G+  A++IG L+G GRLS+N LVA +  VY+E F
Sbjct: 73  PYDDGTSSYLDVFIVGLLNTLLVSVIGVFCASVIGLLIGIGRLSSNFLVAKLSMVYIETF 132

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIP L+ I F Y  VL+ LP   +S+     +FLNNRGL  P    +  +   + +F+L
Sbjct: 133 RNIPILLQILFWYNIVLAALPSTRNSLNYFDAIFLNNRGLLLPKPLFEDGSGFILSAFIL 192

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
                 F  R ++  H+ +G+  PLL +S  L+   P LV   +   +H   PVL  FNF
Sbjct: 193 ACFSVFFLARWAKKRHDLSGQEFPLLKVSLALLILCPLLVFFIVNQPIHAQYPVLKGFNF 252

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  + PE ++L  ALS YTA +IAE VR+G+ +V  GQ EAA +LGL      R V+L
Sbjct: 253 QGGLAIIPELLALIFALSIYTATYIAEAVRAGINSVSTGQKEAAKSLGLKDHVILRKVVL 312

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQA+R IIPP+ +QYLNL+KNSSLA A+G+ D+V++  GT +NQ GQAIEIIL+ M +YL
Sbjct: 313 PQALRVIIPPVINQYLNLVKNSSLATAIGYPDIVTLFSGTTLNQVGQAIEIILMTMAVYL 372

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            +SI+I++ +N +NAK+A+K +
Sbjct: 373 CISIVISVILNWVNAKMAIKGR 394


>gi|86750028|ref|YP_486524.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris HaA2]
 gi|86573056|gb|ABD07613.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris HaA2]
          Length = 401

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 157/398 (39%), Positives = 239/398 (60%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M  +AR   +++ +R++     R     +  Q++   +L  I    V+N  +N+    ++
Sbjct: 1   MAIDARPPPSQFGARLRRALGGRSGWKGLIAQLLFVAVLCWIGYAIVDNARDNLTNQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY    SY    LVG VNT  ++  G+  AT++G LV  GR
Sbjct: 61  SGFGFMSQTAGFGVSQTLIPYAESDSYTRVFLVGLVNTLVVSVIGIFFATLLGFLVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L+A I   YVE+ RN+P L  I F Y +VL  LP P  S+ +    FL+NRG+  
Sbjct: 121 LSPNWLIARIAGGYVELIRNLPLLFQILFWYLAVLGALPGPRQSVSVFDSFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ + ++ ++ ++     +R     TGK + +   S  L+ GLP + ++
Sbjct: 181 PRPVGEAGLDGFLVALLIAVIAAIVLPIYARRRLFDTGKPMKVWPWSVGLLIGLPLIAVL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ P L  FNF GG+ ++PEF++L +AL+ YTA FIAEIVR+G+++V +GQME
Sbjct: 241 IFGRPFGFEIPALKGFNFAGGARIAPEFVALTLALATYTAGFIAEIVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RLV++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGATLRLVVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIE+I I M +YL +S++ +  M+  + +I   
Sbjct: 361 SQTGQAIEVIAITMGVYLLISLITSALMSLYSWRINRS 398


>gi|83595862|gb|ABC25224.1| amino acid ABC transporter, permease protein [uncultured marine
           bacterium Ant4D3]
          Length = 394

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 159/383 (41%), Positives = 240/383 (62%), Gaps = 1/383 (0%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           ++  YD    ++ VQII A L+   F + +NN   N+      +   FL + A ++I+Q 
Sbjct: 12  LRAWYDKETRSVIVQIIAAALILAFFSFIINNAVVNLSNIGKDINFSFLWDNASYDINQH 71

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y+S SS+  A++VG +NT  +A +G++ ATI+G L+G  RLS+N L   I  VY+E 
Sbjct: 72  LIEYSSTSSHFRAMIVGLINTLLVAVAGIVLATILGFLLGVMRLSSNWLTQKIAYVYIEY 131

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN+P L+ I  L+  ++S LP P  S       FLNNRG   P+    +   I     V
Sbjct: 132 MRNVPVLLHILLLHGLIVSSLPRPKGSYNFGDTFFLNNRGFQMPSPEFQSLFWIVSGFVV 191

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
            G+  + + +R ++   + TGKA P+  I+   I  LP  V   L   + +D P L  FN
Sbjct: 192 GGLAFAWWFSRHAQKVQDTTGKAYPVALINIAAIVLLPLAVYFILGSPIEWDVPALKGFN 251

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG  + PEF++L++ALS YTAAFI EIVR+G++A+  GQ EAA ALG+++ +  +LV+
Sbjct: 252 FKGGMVIRPEFIALWLALSLYTAAFIGEIVRAGIVAIDHGQTEAAQALGISNSRVLKLVV 311

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIY 374
           +PQA+R IIPPLTSQYLNL KNSSLA+A+G+ D+V+ +GG  +NQTG+ +E +LI M IY
Sbjct: 312 IPQALRVIIPPLTSQYLNLAKNSSLALAIGYMDIVATIGGISLNQTGREMECMLIVMGIY 371

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L++S++I+  MN  N ++ L E+
Sbjct: 372 LAISLIISSGMNWYNNRMQLVER 394


>gi|312170821|emb|CBX79081.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 392

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 229/395 (57%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R  V R FS      +  V     QII  + + V+  + ++N  NN+    ++ G  F
Sbjct: 2   SPRPAVKRDFS----FSNPAVRAWLFQIIAVVAVIVVAGYLIHNTTNNLASRGITSGFSF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ Y+   SYA   LVG  NT  ++   ++ A+++G  +G  RLS N 
Sbjct: 58  LERSAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSALCILFASLLGFFIGLARLSGNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +YVE FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P    
Sbjct: 118 LLRKLSTIYVETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAFVSNRGLYIPWPEY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+ + +L + +S    R ++    KTG+       +  ++   P   ++     
Sbjct: 178 AAGTVPFLLALLLAMAISSALFRYNKQRQLKTGRLRRTWPATVAMLALFPLATIMLAGSP 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDIPQLHGFNFRGGFALIPELAALTLALSIYTSTFIAEVIRSGIQSVPLGQHEAASSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL        V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GLPRAVTLHQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 358 AIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|91977031|ref|YP_569690.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           BisB5]
 gi|91683487|gb|ABE39789.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB5]
          Length = 401

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 160/398 (40%), Positives = 238/398 (59%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   AR    ++ ++++     R     +  Q++    L  I    V+N  +N+    ++
Sbjct: 1   MAIEARPPPAQFGAKLRRALGGRSGWKGLVAQLLFVATLCWIGYAIVDNARDNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY+   SY    LVG  NT  ++  G+  AT+IG LV  GR
Sbjct: 61  SGFGFMSQTAGFGVSQTLIPYSESDSYTRVFLVGLANTLMVSVIGIFFATLIGFLVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ L    FL+NRG+  
Sbjct: 121 LSPNWLISRIAGGYVELIRNLPLLFQILFWYLAVLGALPGPRQSVTLFDSFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ + ++ ++ ++     +R    +TGK + +   S  L+ GLP +  +
Sbjct: 181 PRPVGEAGLDGFLVALLIAVIGAIVLPIYARRRLFQTGKPMIVWPWSLGLLIGLPLIAAL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ PVL  FNF GGS ++PEF++L +ALS YTAAFIAEIVR+G+++V +GQME
Sbjct: 241 IFGKPFGFEIPVLKGFNFAGGSRLAPEFVALTLALSTYTAAFIAEIVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RLV++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGATLRLVVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIE+I I M +YL +S++ +  M+  + +I   
Sbjct: 361 SQTGQAIEVISITMGVYLLISLITSALMSLYSWRINRS 398


>gi|292486753|ref|YP_003529623.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900845|ref|YP_003540214.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291200693|emb|CBJ47826.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552170|emb|CBA19207.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 392

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 159/395 (40%), Positives = 229/395 (57%), Gaps = 5/395 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R  V R FS      +  V     QII  + + V+  + ++N  NN+    ++ G  F
Sbjct: 2   SPRPAVKRDFS----FSNPAVRAWLFQIIAVVAVIVVAGYLIHNTTNNLASRGITSGFSF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ Y+   SYA   LVG  NT  ++   ++ A+++G  +G  RLS N 
Sbjct: 58  LERSAGFGIVQHLIDYSEGDSYARVFLVGLTNTLLVSALCILFASLLGFFIGLARLSGNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +YVE FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P    
Sbjct: 118 LLRKLSTIYVETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAFVSNRGLYIPWPEY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+ + +L + +S    R ++    KTG+       +  ++   P   ++     
Sbjct: 178 AAGTVPFLLALLLAMAISSALFRYNKQRQLKTGRLRRTWPAAVAMLALFPLATIMLAGSP 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H+D P L  FNF GG  + PE  +L +ALS YT+ FIAE++RSG+ +VP GQ EAA +L
Sbjct: 238 MHWDIPQLHGFNFRGGFALIPELAALTLALSIYTSTFIAEVIRSGIQSVPLGQHEAASSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL        V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQ
Sbjct: 298 GLPRAVTLHQVIIPQAMRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQ 357

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE I I M +YL +S+ I+L MN  N KIAL E+
Sbjct: 358 AIETIAITMGVYLIISLSISLLMNIYNRKIALIER 392


>gi|148658094|ref|YP_001278299.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus sp. RS-1]
 gi|148570204|gb|ABQ92349.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus sp. RS-1]
          Length = 396

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 154/398 (38%), Positives = 239/398 (60%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M    R T     SR  F  D RV  ++ QI+   L+  +    + N+  ++++  L LG
Sbjct: 1   MEHPPRSTSPMRLSRA-FWRDERVIQVAAQILFLALVIWVGSIALRNMLTSLQQQGLVLG 59

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             FL+  AGF+I    +PY+S  ++A A+ VG +NT  ++  G++ +T++G +VG  RLS
Sbjct: 60  FDFLNSGAGFDISDAPIPYSSTDTFARALQVGLLNTILVSVLGIVLSTLLGIVVGVARLS 119

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           +N LV  +  V+VEV RN+P LV++ F+Y +    LP    ++ L   ++L+NRG++ P 
Sbjct: 120 SNWLVNRMAWVFVEVMRNVPLLVLLVFIYTAFFLKLPRARQAVSL-GPIYLSNRGVAIPW 178

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                   ++V   +  ++         R +  ++G+  P +  S   +  +  +   AL
Sbjct: 179 GEPTDTWSLYVSVLIGALIAGAVVGLAMRWWQNRSGRPRPQVVPSLLTMTLIALIGWFAL 238

Query: 241 -KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            +  L    P +  FNF GG  +SPEFM+L I L  YTAAFI E+VR+G+ AVP+GQ+EA
Sbjct: 239 PQPPLALSLPEIAGFNFRGGQVLSPEFMALLIGLVIYTAAFIGEVVRAGIQAVPKGQVEA 298

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGL   +  RLV+ PQA+R IIPP+T+QYLNL KNS+LAVA+G+ DL ++ GTIINQ
Sbjct: 299 ARALGLNPSRTLRLVVFPQALRVIIPPVTNQYLNLTKNSTLAVAIGYPDLFAISGTIINQ 358

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG+A+E+I + M +YL LS++ +L MN  N ++ L E+
Sbjct: 359 TGRAVEMIAVVMAVYLMLSLITSLVMNWYNRRVRLVER 396


>gi|149913100|ref|ZP_01901634.1| hypothetical protein RAZWK3B_03890 [Roseobacter sp. AzwK-3b]
 gi|149813506|gb|EDM73332.1| hypothetical protein RAZWK3B_03890 [Roseobacter sp. AzwK-3b]
          Length = 404

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 160/404 (39%), Positives = 230/404 (56%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           + +        F+  K + D R  + + Q I  +LL  +F +  +N+  N+  + L++  
Sbjct: 1   MTSISPPRGESFTLSKLINDTRYRSYTFQFIALVLLIALFAYLGSNLAQNLRDAGLNISY 60

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           GFLSE AG++I+Q ++ Y S S++  A +VG +NT  +AF G I ATIIG +VG  RLS 
Sbjct: 61  GFLSEPAGYDINQRLIEYDSQSTHLRASIVGVLNTLLVAFLGCILATIIGVVVGVLRLSQ 120

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNR 174
           N L+  +  VYVE+FRN+P L+ I  +     +VLP P           +L        R
Sbjct: 121 NWLIRKLMSVYVEIFRNVPVLIWILIIMAVFTAVLPQPRDFRGDDAEASMLWDAFAFTGR 180

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G  FP    +T + I V +F+  I+        +R    + G+ LP+ + S  L F    
Sbjct: 181 GFYFPKPVFETGSTIVVLTFLASIIGIFVYRSYARKQLFQKGRLLPVFWPSVGLFFVPAV 240

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+       +  + P L  FNF GG      F+SL+ ALS YTAAFIAE VR+G++AV +
Sbjct: 241 LMFFIAGRPISMEYPSLQGFNFQGGIYARNSFISLWFALSIYTAAFIAENVRAGILAVSK 300

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-G 353
           GQ EAA +LGL   +   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+    G
Sbjct: 301 GQTEAAASLGLRPNRIMNLVILPQALRIIIPPLISQYLNLTKNSSLAIAVGYMDITGTLG 360

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +NQTG+AIE +L+ M  YL++S+ I+  MN  N  + LKE+
Sbjct: 361 GITLNQTGRAIETVLLLMLFYLAISLAISAVMNLYNNAVKLKER 404


>gi|159042875|ref|YP_001531669.1| glutamate/glutamine/aspartate/asparagine ABC transport system
           permease [Dinoroseobacter shibae DFL 12]
 gi|157910635|gb|ABV92068.1| glutamate/glutamine/aspartate/asparagine ABC transport system
           permease [Dinoroseobacter shibae DFL 12]
          Length = 411

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 158/403 (39%), Positives = 219/403 (54%), Gaps = 9/403 (2%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
            A     + F+    + D R    + Q I  + L   F W V+N   N+      +   F
Sbjct: 9   PASGPPNQPFNLGMLINDTRYRGYTFQFIALIALIFFFGWLVSNAIYNLAALGQDINFSF 68

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L + A +EIDQ ++PYTS  ++  A  VG +NT  +AF G I ATI G L G  RLS N 
Sbjct: 69  LGQPASYEIDQTLIPYTSTDTHMRAAFVGLLNTLLVAFLGCITATIFGVLAGVLRLSKNW 128

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS--------IVLPFGMFLNNRG 175
           LVA +  VYVE+FRNIP L+ I  +   +   LP P           +VL   +   NRG
Sbjct: 129 LVAKVMSVYVEIFRNIPVLIWIVIISAVMSQALPQPRAFRGEDATATMVLWDSVAFTNRG 188

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +  P    +  + I V  FVL I+      R +++    TGK LP+  IS  + F    L
Sbjct: 189 VYIPAPVWNPGSGIVVAVFVLSIIGIFVFRRYAKNLLFNTGKLLPVGRISLAIFFVPTLL 248

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
               +   +  D P LG FNF GG  +    ++L+ AL+ YT AFIAE VR+G++AV +G
Sbjct: 249 AFFVMGRPIGLDYPELGGFNFRGGINIRGTLIALWFALALYTGAFIAENVRAGILAVSKG 308

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GG 354
           Q EAA ALG+   +   L++LPQA+R IIPP+ SQYLNL KNSSLA A+G+ DL    GG
Sbjct: 309 QTEAAAALGMRPNRIMSLIILPQALRVIIPPVISQYLNLTKNSSLAAAIGYMDLTGTLGG 368

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +NQTG++ E +L+ M  YL +S+ I+  MN  N  + LKE+
Sbjct: 369 VTLNQTGRSFECVLLLMLFYLLISLSISALMNLYNNAVKLKER 411


>gi|7465992|pir||G65119 hypothetical 40.4 kD protein in acrF-rrnD intergenic region -
           Escherichia coli (strain K-12)
 gi|606210|gb|AAA58073.1| ORF_o368a; frameshift at end might extend [Escherichia coli str.
           K-12 substr. MG1655]
          Length = 368

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 142/344 (41%), Positives = 206/344 (59%), Gaps = 1/344 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 201

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 202 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 261

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+
Sbjct: 262 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQAL 321

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTG+ 
Sbjct: 322 RVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGKP 365


>gi|119946444|ref|YP_944124.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119946448|ref|YP_944128.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865048|gb|ABM04525.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865052|gb|ABM04529.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 405

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 156/382 (40%), Positives = 232/382 (60%), Gaps = 2/382 (0%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L   R   I  Q +  L +     +  +N+++N+EK  ++ G  FL E AGF + Q ++
Sbjct: 24  LLSSPRNRAIIFQCLALLAVVACAFYFTSNMFDNIEKRGITTGFSFLGETAGFGVSQSLI 83

Query: 78  PYTSD-SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
            Y    S++    +VG +NT  +   G+I A++ G L+G GRLS+N +VA +  VY+E F
Sbjct: 84  AYDDTTSTFLDVFIVGILNTLLVGVIGIICASVFGLLIGIGRLSSNFIVAKLSLVYIETF 143

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIP L+ I F Y  VL+ LP P  S      +FLNNRGL  P     + +   + +FV+
Sbjct: 144 RNIPILLQILFWYNIVLAALPGPRQSFSYFESIFLNNRGLLLPEPIFQSGSIFILIAFVI 203

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
                +F TR ++  H++TG+  PL+ +S  ++   P L        +  + P L  FNF
Sbjct: 204 ACTAVIFLTRWAKKRHDQTGEEFPLIKVSLAILIVSPLLAYFVTGQPITAEYPALKGFNF 263

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  + PEF++L  ALS YTA +IAE VR+G+ AV  GQ EAA +LGL      R V+L
Sbjct: 264 QGGLAIIPEFLALTFALSIYTATYIAEAVRAGIEAVASGQKEAAESLGLKKHVILRKVVL 323

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYL 375
           PQA+R IIPP+ +QYLNL+KNSSLA A+G+ ++V++  GT +NQ GQAIEII++ M +YL
Sbjct: 324 PQALRVIIPPVINQYLNLVKNSSLATAIGYPEIVTLFSGTTLNQVGQAIEIIMMTMAVYL 383

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           + SI+I+L +N +NAK+ +K +
Sbjct: 384 TFSIVISLLLNWVNAKMEIKGR 405


>gi|154253425|ref|YP_001414249.1| polar amino acid ABC transporter inner membrane subunit
           [Parvibaculum lavamentivorans DS-1]
 gi|154157375|gb|ABS64592.1| polar amino acid ABC transporter, inner membrane subunit
           [Parvibaculum lavamentivorans DS-1]
          Length = 400

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 163/380 (42%), Positives = 224/380 (58%), Gaps = 1/380 (0%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             + RV +   Q  +   +  I  +       N+ + N+S G+GFL   AGF I Q ++P
Sbjct: 21  WNNPRVRSFVYQAAVLGSVIAIVWFFTTTAQENLARLNISSGLGFLDTTAGFGIIQTLIP 80

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           YT  SSY  A LVG +NT  +A  G++ + ++G  +G  RLS N L+A I   YVE+ RN
Sbjct: 81  YTEQSSYGRAFLVGLLNTLVVAVIGIVLSVMLGFFIGVMRLSRNWLIAKIAAGYVEIMRN 140

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP L+ +FF Y +VL  LP P  SI    G+F+NNRGL  P       A  F  +  + +
Sbjct: 141 IPLLLHLFFWYFAVLRPLPGPAESISPLPGVFINNRGLILPEPIFGATASAFFIAIAVAL 200

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                  R +R     TG+  P    +  L+  LP LV +               F+F G
Sbjct: 201 AAGFLLIRWARKRQVATGQLFPAWRTAVALLVVLPGLVWLVAGAPFELAFARHAGFDFDG 260

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G  + PEF++L + L+ YTA FIAEIVR+G+++V +GQ EAA ALGL      RLV++PQ
Sbjct: 261 GMRLLPEFVALVLGLTLYTAGFIAEIVRAGILSVSKGQREAAAALGLKDSTTLRLVVIPQ 320

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSL 377
           A+R IIPPLTSQ LNL KNSSLAVA+ + DLV+V  GT++NQTGQAIE+I + M +YL+L
Sbjct: 321 ALRLIIPPLTSQILNLTKNSSLAVAIAYPDLVAVFAGTVLNQTGQAIEVIALTMAVYLTL 380

Query: 378 SIMIALFMNRLNAKIALKEK 397
           S++ +L MN  NA IALKE+
Sbjct: 381 SLITSLLMNWYNAHIALKER 400


>gi|259416750|ref|ZP_05740670.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Silicibacter sp. TrichCH4B]
 gi|259348189|gb|EEW59966.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Silicibacter sp. TrichCH4B]
          Length = 422

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 145/418 (34%), Positives = 225/418 (53%), Gaps = 30/418 (7%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     +YD R  + ++Q++  +   ++    ++N  +N+          FLSE 
Sbjct: 7   PPKESFRLSMLIYDTRYRSATIQVVAMIGFMILIGSIISNTVHNLTDLGKEPSFSFLSEP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q ++ Y +  S+  A L+G +NT  +A  G I ATI+G ++G  RLS+N LVA 
Sbjct: 67  AGYDINQRLLDYDNQDSHMRASLIGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVAR 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH-------------------------S 162
           +  +YVE+FRN+P L+ I F+   ++  LP P                            
Sbjct: 127 LMTIYVEMFRNVPVLLWIVFIMAILIETLPAPRAFRGDAPEATMSVFDSVAVTNRGVYVP 186

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG--IVLSLFATRLSRHFHEKTGKALP 220
             L      N        L  D +  +  F  VLG  +  S+   + +    E TG+   
Sbjct: 187 EPLFHNSLGNVHVFGDSALRFDVSLDLMAFLIVLGGSLYASMRIRKWADALQESTGRRPT 246

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + +I   ++     L+++ L +  H   P L  FNF GG+ +    ++L++ALS YTAAF
Sbjct: 247 IWHIRAAVVIVPSALLMLVLGF--HLGYPELKGFNFSGGTHLRNSLIALWLALSLYTAAF 304

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEIVRSG++A+ +GQ EAA ALGL  ++   LV+LPQA+R IIPPL S YLNL KNSSL
Sbjct: 305 IAEIVRSGILAISKGQTEAAAALGLRPKRIMNLVVLPQALRVIIPPLISNYLNLTKNSSL 364

Query: 341 AVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+AVG+ DL     G  +NQTG+ +E +L+ M +YL++S++I+  MN  N ++ L E+
Sbjct: 365 AIAVGYMDLTGTLMGITMNQTGRELETVLLGMLVYLTISLLISSAMNWYNNRVKLVER 422


>gi|84515668|ref|ZP_01003029.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Loktanella vestfoldensis SKA53]
 gi|84510110|gb|EAQ06566.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Loktanella vestfoldensis SKA53]
          Length = 404

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 154/404 (38%), Positives = 229/404 (56%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           + +        F     LYD R  ++++Q++ A+L+ +     V+N   N+      +  
Sbjct: 1   MADISDHPRETFRISMLLYDARYRSLTIQVVAAMLIMLFLAQLVDNTVTNLAVLGKDISF 60

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FL   AG++I+Q I+P+TS  ++A A LVG +NT  +A  G I AT+IG   G  RLS 
Sbjct: 61  SFLWSTAGYDINQQIIPFTSQDTHARAALVGILNTLLVAVLGCILATVIGVFAGVLRLSK 120

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS-------IVLPFGMFLNNR 174
           N LVA +   YVE  RN P L+ I  ++  +    P P          +V    + + NR
Sbjct: 121 NWLVARVMTFYVECMRNTPLLIWILIVFAVMTEATPQPRDFREGGTAAMVFADSVAVTNR 180

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G+  P       + I V   +L I+       ++R   E TG+ LP+L +S  ++    T
Sbjct: 181 GVFIPRPIWADGSGIVVAFLILSIIGIFVLRYVARKRQEDTGQQLPVLRLSLAMLIVPVT 240

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L   A+   +  + P LG FNF GG  V   F++L++ALS YT+AFIAEIVRSG++AV +
Sbjct: 241 LAFFAVGRPITLEYPELGGFNFEGGLQVRNSFIALWLALSLYTSAFIAEIVRSGILAVSK 300

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVG 353
           GQ EAA ALG+   +  +L++LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D   ++G
Sbjct: 301 GQTEAAFALGMQPNRTMQLIILPQALRVIIPPLISQFLNLTKNSSLALAVGYMDARSTLG 360

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +NQTG+ +E IL+    YL  S++I+  MN  N+ + LKE+
Sbjct: 361 GITVNQTGRELEGILLLGIFYLITSLIISSAMNFYNSGVKLKER 404


>gi|170743937|ref|YP_001772592.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168198211|gb|ACA20158.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 400

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 167/396 (42%), Positives = 242/396 (61%), Gaps = 6/396 (1%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
           +      R+  L D +V   + QI+L L + ++    ++N   N+  + ++ G GFL   
Sbjct: 5   SPASGPPRVSPLNDPKVRGAAYQILLLLGIGLVAWMAISNAAENLRNARIASGFGFLGNT 64

Query: 68  AGFEIDQGIVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           AGF++ Q +VP+ +  S+Y  A +VG +NT  +A  G+  AT++G L+G  RLS N ++A
Sbjct: 65  AGFDVSQALVPFAAATSTYGAAFVVGLLNTLLVAVIGIAVATVLGFLIGVARLSPNWMLA 124

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  VYVEV RNIP L+ + F Y +VL+ LP    S+  P  +FLN RGL  P   +  +
Sbjct: 125 KLATVYVEVVRNIPLLLQLLFWYVAVLAALPGARDSLAFPGSVFLNQRGLYVPKPILAAD 184

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---- 242
           A     +F +G+  +L     +R    +TG+  P+  +   L+ GLP L    L      
Sbjct: 185 AWAIPAAFGIGVAAALAYRFRARREQARTGRQAPVGLVGLALVLGLPLLAWAGLALAGLS 244

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PV G FN  GG  + PEF++L + LS YTAAFIAE+VRSG+ AV +GQ EAA A
Sbjct: 245 PVTVELPVKGTFNLRGGLQLFPEFVALVLGLSIYTAAFIAEVVRSGIQAVAKGQTEAARA 304

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL      RLV++PQAMR I+PPLTSQYLNL KNSSLAVA+G+ DLV V  GT++NQTG
Sbjct: 305 LGLRPGPTLRLVVIPQAMRVIVPPLTSQYLNLTKNSSLAVAIGYPDLVQVFMGTVLNQTG 364

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QA+E++ I M +YL++S++ A  MN  N ++AL E+
Sbjct: 365 QAVEVVAITMAVYLTISLVTATGMNLYNRRVALIER 400


>gi|158423210|ref|YP_001524502.1| amino acid ABC transporter permease protein precursor [Azorhizobium
           caulinodans ORS 571]
 gi|158330099|dbj|BAF87584.1| amino acid ABC transporter permease protein precursor [Azorhizobium
           caulinodans ORS 571]
          Length = 429

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 178/417 (42%), Positives = 239/417 (57%), Gaps = 34/417 (8%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           R     D +V ++ +Q++L L L  +    + N   N+ +  ++ G GFL   AGF I Q
Sbjct: 13  RRWSWTDPKVRSLVLQVLLGLFLIWMAWSIIANAQANLARQGIASGFGFLDNSAGFGITQ 72

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++PY    SY  A LVG +NT  +A  G+I +TIIG L+G  RLS N ++  +   YVE
Sbjct: 73  TLIPYGESDSYGRAFLVGLLNTLLVAVLGIILSTIIGFLMGVARLSNNVVIKGLSTAYVE 132

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF--------------------------- 167
           + RN+PPL  I F Y +VL+ LP P  SI                               
Sbjct: 133 ITRNLPPLFQIMFWYIAVLAALPGPRQSIGFGLQPLLNVLGDGLNAVGLASVGTSLKALA 192

Query: 168 ------GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G+FLNNRGL  P       A+   ++FV+ +VL     R ++   E TG+  P+
Sbjct: 193 GGVSAPGVFLNNRGLVIPRAIFGEGAQFVFWAFVVALVLVFVLGRWAKRRREATGQQFPV 252

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            + S  L+ GLP L   AL + + F+KP L  FNF GG  V PE +SL +ALS YTA FI
Sbjct: 253 FWTSLALLIGLPFLTGAALGFPVTFEKPELRGFNFAGGVRVIPELVSLLLALSIYTAGFI 312

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VRSG++AV +GQ EAA +LGL      RLV++PQAMR IIP LTSQYLNL KNS+L 
Sbjct: 313 AETVRSGILAVSKGQTEAAHSLGLKGGLTMRLVVIPQAMRVIIPQLTSQYLNLTKNSTLG 372

Query: 342 VAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           VAVG+ DL SV  GT +NQTGQAIEII I M +YL++S++  L M+  N ++AL E+
Sbjct: 373 VAVGYPDLFSVFAGTTLNQTGQAIEIIAITMAVYLTISVVTTLIMDWYNRRVALIER 429


>gi|110678762|ref|YP_681769.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter denitrificans OCh 114]
 gi|109454878|gb|ABG31083.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter denitrificans OCh 114]
          Length = 404

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 155/398 (38%), Positives = 225/398 (56%), Gaps = 8/398 (2%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     L D R  +I+ Q I  L L V   +  NN++ N+    L++  GFL + 
Sbjct: 7   PPRESFRLSMLLNDTRYRSITFQAIALLALIVAIAYLANNLFTNLAAQGLNISYGFLGDP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q ++ Y S SS A A LVG +NT  +AF   I AT+ G + G  RLS N LV+ 
Sbjct: 67  AGYDINQRLIEYDSQSSNARAALVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVSK 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNRGLSFPT 180
           +   YVE+FRNIP L+ I  ++  + +V+P P           +L       NRG+  P 
Sbjct: 127 LMSFYVEIFRNIPVLIWIIIIFTIMTAVMPAPRAFRGDEPEATMLLGAFAFTNRGIYIPA 186

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                 + + V +F+  +V      R +++   +TG+ LP+ + S  + F    ++   +
Sbjct: 187 PIWGPGSMVVVATFIASVVGVFAYRRYAKNLLYQTGRLLPMGWPSLAIFFVPTIVMFFIM 246

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  D P LG FNF GG  +    ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA
Sbjct: 247 GRPIGLDIPELGGFNFRGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAA 306

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
            ALGL   +   LV+LPQA+R IIPPL S YLN+ KNSSLA+AVG+AD+ +  GG  +NQ
Sbjct: 307 SALGLHPGRVMNLVVLPQALRVIIPPLISHYLNITKNSSLAIAVGYADITATLGGITLNQ 366

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG+AIE +L+ M  YL +S+ I+  MN  N  + LKE+
Sbjct: 367 TGRAIECVLLLMLFYLVISLSISAIMNVYNKTVTLKER 404


>gi|254508777|ref|ZP_05120889.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219548297|gb|EED25310.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 371

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 170/370 (45%), Positives = 237/370 (64%), Gaps = 1/370 (0%)

Query: 29  VQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATA 88
            QII  L L   F   VNN  +N+E   ++ G GFL + AGF I   ++ Y    SY   
Sbjct: 2   FQIIAILALFFFFYTIVNNALSNLEARGIATGFGFLDQEAGFGIGLTLIEYDETYSYGRT 61

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L+G +NT  ++F G+I AT++G ++G  RLS N LV+ +  VY+E+FRN+P L+ IFF 
Sbjct: 62  FLIGLLNTALVSFLGIILATVVGFVMGVARLSNNWLVSRLAAVYIEIFRNVPLLLQIFFW 121

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y +VL  LP    S+ L   +FLN RGL FP    +  + + + S V+G++ S+F    +
Sbjct: 122 YFAVLQALPSARQSLSLGEAIFLNVRGLYFPAPIFEAGSGVVIASLVIGVLASIFVGIWA 181

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R+    TG+  P+  I   L+  LPT+V   +   +  + P L  FNF GG ++ PE  +
Sbjct: 182 RNKQRITGQQTPMGRIVFGLVVVLPTIVYFVMGSPISAEYPELKGFNFRGGISIIPELAA 241

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L +ALS YTA+FIAEIVRSG+ AV  GQ EAA++LGL   +  +LV++PQA+R IIPPLT
Sbjct: 242 LLLALSIYTASFIAEIVRSGINAVSHGQTEAAMSLGLPKSRTLKLVIIPQALRIIIPPLT 301

Query: 329 SQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           SQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M +YL+LS++ +  MN 
Sbjct: 302 SQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIAMTMAVYLTLSLLTSALMNI 361

Query: 388 LNAKIALKEK 397
            N K+AL E+
Sbjct: 362 YNRKVALVER 371


>gi|75675720|ref|YP_318141.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           winogradskyi Nb-255]
 gi|74420590|gb|ABA04789.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 401

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 164/400 (41%), Positives = 242/400 (60%), Gaps = 3/400 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   +RK   ++  R++     R     +++Q++   +L  I    V N   N+E  N +
Sbjct: 1   MATRSRKPPLQFSLRLRRALGGRAGWSGLALQVLFVAILAWIGYEIVANARGNLEAQNTA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G+GF+S  AGF + Q ++PY+   SY    LVG VNT  +A  G+  AT+IG +V  GR
Sbjct: 61  SGLGFMSNTAGFGVSQTLIPYSQTDSYTRVFLVGLVNTLVVAAVGIFFATVIGFMVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL +LP P  SI +  G+FL+NRGL+ 
Sbjct: 121 LSPNWLISRISGGYVELVRNLPLLFQILFWYLAVLRMLPSPKQSISILDGVFLSNRGLAI 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P          F  +  + I+  +     SR    +TG+AL +   +  L+  LP + + 
Sbjct: 181 PRPVGQEGLIAFAVAIAVAIIGCMVLRSHSRRSLFRTGRALVVWPYALGLLIFLPAVAIA 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ PVL  FNF GG+ + PEF++L IALS YTAAFIAE+VR+G+++V +GQME
Sbjct: 241 VFGIPFTFEMPVLKGFNFSGGARLIPEFVALAIALSTYTAAFIAEVVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  ALGL+     RL+++PQAMR ++PPLT+QYLNL KNSSLAVA+G+ +L SV  GT +
Sbjct: 301 AGAALGLSRGSTLRLIVVPQAMRVVLPPLTNQYLNLTKNSSLAVAIGYPELFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +QTGQAIEI+ I M +YL +S++ +  M+  + ++A   +
Sbjct: 361 SQTGQAIEILAITMGVYLLISLVTSGIMSIYSRRVARSVR 400


>gi|84499807|ref|ZP_00998095.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Oceanicola batsensis HTCC2597]
 gi|84392951|gb|EAQ05162.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Oceanicola batsensis HTCC2597]
          Length = 389

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 148/388 (38%), Positives = 215/388 (55%), Gaps = 8/388 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            + D R  +I+ Q++  +LL     +   N+  N+      +   FL E +G++I+Q  +
Sbjct: 2   LVNDTRYRSITFQVVALILLAAAIGFLGWNLMRNLALLGQDISFEFLGEPSGYDINQRPI 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PY S SS+  A  VG +NT  +AF G I ATI+G + G  RLS N ++  +  VYVE FR
Sbjct: 62  PYDSQSSHLRATFVGVLNTLIVAFLGCITATILGVVAGVLRLSNNWIIRKLMMVYVEAFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI------VLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           N+P L+ I  ++  + + LP P           + FG F       +    +       V
Sbjct: 122 NVPVLIWILIIFFVMTAALPPPSAFRGDDPDSSMLFGAFAFTNRGIYIPRPIWEPGSAIV 181

Query: 192 FSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
               +  V+ +FA  R +      TGK LP  + S  ++F    LV   L   +  D P 
Sbjct: 182 VGVFIASVIGVFAYRRYTTRLLYDTGKLLPRGWPSLLILFVPTLLVFFILGQPISLDLPA 241

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  FNF GG+ +    ++L+ AL+ YT AFIAE VR+G+ AV  GQ EAA +LGL   + 
Sbjct: 242 LRGFNFQGGTQIRGSLIALWFALAIYTGAFIAENVRAGIQAVSHGQTEAAASLGLRPGRI 301

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILI 369
             LV+LPQA+R +IPP+ SQYLNL KNSSLA+AVG+ DL    GG  +NQTG+AIE +L+
Sbjct: 302 MNLVVLPQALRIVIPPVISQYLNLTKNSSLAIAVGYMDLTGTLGGITLNQTGRAIESVLL 361

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M  YL++S+ I+  MN  NA++ LKE+
Sbjct: 362 LMLFYLTISLSISAVMNVYNARMQLKER 389


>gi|84685381|ref|ZP_01013279.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666538|gb|EAQ13010.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Rhodobacterales bacterium HTCC2654]
          Length = 419

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 153/420 (36%), Positives = 228/420 (54%), Gaps = 42/420 (10%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R  + ++QI+  +   ++  W V+N   N+     S+G GFL+E AG++I+Q ++
Sbjct: 2   LIYDSRYRSATIQIVALIGFLLLIGWLVSNTVQNLADLGKSVGFGFLTEPAGYDINQRLL 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S  S+A A L+G +NT  +A  G I ATI+G +VG  RLS N LVA I  VYVE+FR
Sbjct: 62  DYDSRDSHARASLMGLLNTLLVAVLGCIMATIVGVIVGVLRLSNNWLVARIMTVYVEMFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI---------------------------------- 163
           N+P L+ I F    ++  LP P                                      
Sbjct: 122 NVPVLLWIVFSMAILIETLPAPSAFRGDEPSASMLLGDSVALTNRGVYVPEPLFGRMDEE 181

Query: 164 -----VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                       ++  G ++    +     +F+ + + GI++S    + +      TG  
Sbjct: 182 GHPLTWRQGLGDIHLFGEAWFRFDVSLELVVFLSTLIAGILVSRLIGQRADRIQNSTGVR 241

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               ++   +I     +VL  + + L   KP L  FNF GG+ +   F++L++ALS YTA
Sbjct: 242 PKTFWLRAAVIVVPSVIVLWLMGFYL--GKPALRGFNFDGGTHLRNSFIALWLALSLYTA 299

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAEIVR G++A+ +GQ EAA ALG+  R+   LV+LPQAMR IIPPL SQYLNL KNS
Sbjct: 300 AFIAEIVRGGILAISKGQTEAAAALGIRPRRIMSLVILPQAMRVIIPPLISQYLNLTKNS 359

Query: 339 SLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SLA+AVG+ DL     G  +NQTG+ +E +++ M IYL++S+ I+  MN  N ++ LKE+
Sbjct: 360 SLAIAVGYMDLTGTLMGITLNQTGRELEAVMMTMLIYLAISLAISGAMNVYNNRVKLKER 419


>gi|56697222|ref|YP_167587.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
 gi|56678959|gb|AAV95625.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
          Length = 390

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 148/372 (39%), Positives = 228/372 (61%)

Query: 26  NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSY 85
           ++  Q  + +++  I     +N   N+    +  G  FL   AG  I   ++ Y+   SY
Sbjct: 19  SLLSQGGVLVVVIAILYVLFSNTQENLAIRGIESGFAFLGHEAGLPIGDSLIDYSPTRSY 78

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A LVG +NT +++   ++ +T++G ++G  R+S N L+A    +YVE  RN+P L+ +
Sbjct: 79  GYAFLVGILNTLFVSVLAIVFSTLLGIVIGVARVSRNWLLAKGAAIYVETLRNLPLLLTL 138

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           FF+Y  VL+ LP P  +I L  G+FL+ RG   P    +    +F+ +  + +VL++   
Sbjct: 139 FFIYTVVLAALPHPRDAIALSEGVFLSKRGFYLPRPVAEDGIGLFLGASAVALVLAVMFW 198

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R ++ +  +TG+++P L     +   L  L  +A    L  + PV   FNF GG ++ PE
Sbjct: 199 RWAKSYKVRTGRSVPGLRGGLAIFLALSGLAFLASGQPLTSELPVYKGFNFKGGLSIKPE 258

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F SL I L  YTAA++AE VRSG+ +V  GQ+EAA ALG++    TR+VLLPQA+R  IP
Sbjct: 259 FASLLIGLVLYTAAYVAENVRSGIQSVHAGQIEAANALGVSSGVVTRMVLLPQALRVTIP 318

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             T+ Y +L+KNSSLAVA+G+ D+VSVGGTII Q GQAIEII +WM +YL+++++I+L M
Sbjct: 319 ATTNDYASLVKNSSLAVAIGYPDMVSVGGTIIGQNGQAIEIIAMWMAVYLTINLIISLGM 378

Query: 386 NRLNAKIALKEK 397
           N LNA++ L E+
Sbjct: 379 NMLNARVQLVER 390


>gi|39935627|ref|NP_947903.1| polar amino acid ABC transport permease AapQ-1 [Rhodopseudomonas
           palustris CGA009]
 gi|39649480|emb|CAE28002.1| polar amino acid ABC transport permease protein aapQ-1
           [Rhodopseudomonas palustris CGA009]
          Length = 401

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 153/398 (38%), Positives = 233/398 (58%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M  +AR    +  ++++     R     +  Q++    L  I    V+N  +N+    ++
Sbjct: 1   MAIDARPPPPQLVAKLRRALGGRSGWKGLLAQVLFVAALFWIGYEIVDNARDNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G  F+S  AGF + Q ++PY    SY    LVG +NT  ++  G+  AT+IG  V   R
Sbjct: 61  SGFAFMSHTAGFGVSQTLIPYQESDSYTRVFLVGLINTLVVSVVGIFFATVIGFAVALAR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ +    FL+NRG+  
Sbjct: 121 LSPNWLISRIGGGYVEIVRNLPLLFQILFWYLAVLGSLPSPRQSVSVMDSFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P L  +     F+ + ++ +  ++     +R     TGK + +      L+ GLP +  +
Sbjct: 181 PRLAGEAGLDGFLVALLIAVAAAIVLPLYARRRLFATGKPMRVWPWVLGLLIGLPLIAFV 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +      + PVL  FNF+GGS ++PEF++L +ALS YTAAFIAE+VR+G+++V +GQME
Sbjct: 241 IVGKPFSLEVPVLRGFNFVGGSRIAPEFVALTLALSTYTAAFIAEVVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+  +  RL+++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGQTLRLIVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIE+I I M +YL +S++ +  M+    +I   
Sbjct: 361 SQTGQAIEVIAITMGVYLLISLVTSALMSLYGWRINRS 398


>gi|260223279|emb|CBA33682.1| General L-amino acid transport system permease protein aapQ
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 369

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 144/369 (39%), Positives = 219/369 (59%), Gaps = 1/369 (0%)

Query: 29  VQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATA 88
            QI+  +++ +  L+  +N   NM+   +  G  FL+  AGF+I +    + S  SY  A
Sbjct: 2   YQIVAIVVVLLAVLYLAHNTTTNMKLRGIQSGFDFLTGPAGFDIGESFFAFDSGESYWRA 61

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            LVGFVNT  +A  G++  T++GTL+G GR S N L+  +C  YVE FRNIP L+ +   
Sbjct: 62  YLVGFVNTLRVAVVGIVLTTLLGTLIGVGRFSRNALIRGLCSAYVEFFRNIPVLLQLLMW 121

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y     VLP  +  +VL    FL+  GL+FP     T      +  + G++ ++     +
Sbjct: 122 YLMFTEVLPASNEPLVL-GPFFLSKGGLNFPIPEWATGHVWGAWGLLAGVIGAVLYRSYA 180

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +   E+TG+   + +    ++ G   L  +        + PV G+F    G  ++PE++S
Sbjct: 181 KKSFEQTGRVKSMFWTPLAIVLGAGILGWLLGGAPTALNMPVQGEFAIENGGALTPEYLS 240

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + + L+ YTAAF++E+VR G+ +V  GQ EAA ALGL+  +  RLV+LPQA+R IIPP+T
Sbjct: 241 VLLGLTIYTAAFVSEVVRGGIQSVALGQSEAAAALGLSRGQTMRLVMLPQALRVIIPPVT 300

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +QYLNL KNSSLAVA+G+ D+VS+  T INQTG+A+E I I M +YLS S+  ++ MN  
Sbjct: 301 NQYLNLTKNSSLAVAIGYPDVVSIANTAINQTGRAVECIAIIMLVYLSTSLFTSITMNWY 360

Query: 389 NAKIALKEK 397
           N + A+KE+
Sbjct: 361 NTRSAIKER 369


>gi|192291211|ref|YP_001991816.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
 gi|192284960|gb|ACF01341.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
          Length = 401

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 154/398 (38%), Positives = 233/398 (58%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M  +AR    +  ++++     R     +  Q++    L  I    V+N  +N+    ++
Sbjct: 1   MAIDARPPPPQLVAKLRRALGGRSGWKGLLAQVLFVAALFWIGYEIVDNARDNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G  F+S  AGF + Q ++PY    SY    LVG +NT  ++  G+  AT+IG  V   R
Sbjct: 61  SGFAFMSHTAGFGVSQTLIPYQESDSYTRVFLVGLINTLVVSVVGIFFATVIGFAVALAR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  SI +    FL+NRG+  
Sbjct: 121 LSPNWLISRIGGGYVEIVRNLPLLFQILFWYLAVLGSLPSPRQSISVMDSFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P L  +     F+ + ++ +  ++     +R     TGK + +      L+ GLP +  +
Sbjct: 181 PRLAGEAGLDGFLVALLIAVAAAIVLPLYARRRLFATGKPMRVWPWVLGLLIGLPLIAFL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +      + PVL  FNF+GGS ++PEF++L +ALS YTAAFIAE+VR+G+++V +GQME
Sbjct: 241 IVGKPFSLEVPVLRGFNFVGGSRIAPEFVALTLALSTYTAAFIAEVVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+  +  RL+++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGQTLRLIVIPQAMRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIE+I I M +YL +S++ +  M+    +I   
Sbjct: 361 SQTGQAIEVIAITMGVYLLISLVTSALMSLYGWRINRS 398


>gi|254469135|ref|ZP_05082540.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Pseudovibrio sp. JE062]
 gi|211960970|gb|EEA96165.1| glutamate/glutamine/aspartate/asparagine-binding protein
           [Pseudovibrio sp. JE062]
          Length = 678

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 147/354 (41%), Positives = 203/354 (57%), Gaps = 4/354 (1%)

Query: 48  VYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPA 107
              N+E        GFL E AG++I Q +V YTS S +  A LVG +NT  +AF   + A
Sbjct: 325 AVENLEALGKDFNFGFLYEPAGYDIGQVLVNYTSASGHWKAALVGLLNTLLVAFLACVTA 384

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS---IV 164
           TIIG  VG  RLS N +V+ +  VY+E  RN+P L+ I   Y   + V P P  +    V
Sbjct: 385 TIIGVFVGVLRLSNNWVVSRLMAVYIEGVRNVPLLLQILAWYAVFIHVFPTPKQAVKAPV 444

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   ++  NRG   P LT D   +I V   +  I       R +R   E TG+ LP+ YI
Sbjct: 445 IEGAVYATNRGFYIPGLTFDGGYQIVVAVLLASIAGIFVFRRWARQRQEATGQILPVGYI 504

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  ++     L   A    +  D PV G+FN  GG  V    ++L+ ALS Y+AAF+AEI
Sbjct: 505 SLAILIVPTVLAYFASGMPIGLDYPVAGRFNLKGGLKVGTPLIALWFALSIYSAAFVAEI 564

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G++A+ +GQ EAA ALGL  R+   LV+LPQ++R IIPP+ S YLN+ KNSSLA+AV
Sbjct: 565 VRAGIMAISKGQTEAAYALGLRPRRTMSLVVLPQSLRIIIPPMISNYLNITKNSSLAIAV 624

Query: 345 GFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G+ DL    GG  +NQTG+ +E +L+ M  YL +S+ I+  MN  N  + LK +
Sbjct: 625 GYMDLTGTLGGITLNQTGREMECMLLLMATYLLISLSISAVMNVYNESVKLKGR 678


>gi|56695434|ref|YP_165782.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Ruegeria pomeroyi DSS-3]
 gi|56677171|gb|AAV93837.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Ruegeria pomeroyi DSS-3]
          Length = 422

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 148/418 (35%), Positives = 226/418 (54%), Gaps = 30/418 (7%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     LYD R  + ++Q+I  +   ++  W ++N   N+      +  GF SE 
Sbjct: 7   PPKEQFRLSMLLYDTRYRSATIQVIAMIGFMLLAAWLISNTAQNLAALGKPIDFGFFSEP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           A ++I+Q ++ Y+S  ++  A  +G +NT  +A  G I AT++G ++G  RLS N +VA 
Sbjct: 67  ASYDINQRLLDYSSRDTHLRAAFIGLLNTLVVAVLGCITATVLGVIIGVLRLSNNWIVAR 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI---------------------VLP 166
           +  +YVE FRN+P L+ I F+   ++  LP P                          +P
Sbjct: 127 LMTIYVEGFRNVPVLLWIVFIMAILIETLPAPRAFRGDDATASMMLNDSVAVTNRGVYIP 186

Query: 167 FGMFLNN----RGLSFPTLTMDTNAKIFVFSFVLG--IVLSLFATRLSRHFHEKTGKALP 220
             +F N+          +L  D +  + +   VLG  + +S F  + +    E+TG    
Sbjct: 187 DALFSNSLGNVHLFGESSLRFDISLDLMLILIVLGGSLWVSNFLRKRADRIQEQTGDRPV 246

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             +    ++     LVL+ L +  H   P L  FNF GG+ +    ++L++ALS YTAAF
Sbjct: 247 TWWQRLAVVVLPTGLVLVLLGF--HLGYPELKGFNFQGGTHLRNSLIALWLALSLYTAAF 304

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEIVR+G++A+ +GQ EAA ALGL   K   LV+LPQA+R IIPPL S YLNL KNSSL
Sbjct: 305 IAEIVRAGILAISKGQTEAASALGLRSNKIMSLVILPQALRVIIPPLISNYLNLTKNSSL 364

Query: 341 AVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+AVG+ D+    GG  +NQTG+ +E IL+ M +YL++S+ I+  MN  N  + LKE+
Sbjct: 365 AIAVGYMDITGTLGGITMNQTGRELETILLLMLVYLTISLSISAVMNWYNESVKLKER 422


>gi|85703852|ref|ZP_01034955.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. 217]
 gi|85671172|gb|EAQ26030.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. 217]
          Length = 418

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 149/398 (37%), Positives = 219/398 (55%), Gaps = 8/398 (2%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     +YD R  + + Q I  +LL ++  +   N+ +N+     ++  GFLS+ 
Sbjct: 21  PPKASFQLSMLIYDTRYRSYTFQFIALMLLLLLLGYLGANLVSNLAAQGQNISFGFLSDP 80

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q  + Y S SS+  A +VG +NT  +A  G   AT+ G   G  RLS N LV  
Sbjct: 81  AGYDINQRPIEYDSQSSHMRASVVGVINTLIVAVLGCATATLFGVTAGILRLSPNWLVRK 140

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNRGLSFPT 180
           +  VYVE FRN+P L+ I  +   + + +P P+          +L       NRG+  P 
Sbjct: 141 LMAVYVEAFRNVPVLIWILIIATIMTASMPSPNQFRGDNADASMLLDAFAFTNRGVYVPA 200

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                 + + V +F+  I    +  R +      TG+ LP+ + S  ++F    L+   L
Sbjct: 201 PVWGAGSLVVVLTFLASIAGVFYYRRYATKLLYDTGRLLPMGWPSLVILFVPTILIFFVL 260

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  D P L  FNF GG  +    ++L+ AL+ YT AFIAE VR+G+ AV +GQ EAA
Sbjct: 261 GQPITLDYPALKGFNFDGGLHIRGSLIALWFALAIYTGAFIAENVRAGIQAVSKGQTEAA 320

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
            +LGL  ++   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+    GG  +NQ
Sbjct: 321 ASLGLRPKRIMNLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQ 380

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG+AIE +L+ M  YL++S+ I+  MN  N  I LKE+
Sbjct: 381 TGRAIECVLMLMLFYLTISLAISAVMNVYNNTIKLKER 418


>gi|83941463|ref|ZP_00953925.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Sulfitobacter sp. EE-36]
 gi|83847283|gb|EAP85158.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Sulfitobacter sp. EE-36]
          Length = 404

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 153/404 (37%), Positives = 233/404 (57%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           +          F     L D R  + + Q I  +LL  +  +   N+  N+ ++ L++  
Sbjct: 1   MTTMSDPQQGSFRLSMLLNDTRYRSYTFQFIALILLIALMSFLGINLVRNLAEAGLNISY 60

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           GFL+  AG++I+Q ++ Y S SS   A +VG +NT  +AF   + ATI+G + G  RLS 
Sbjct: 61  GFLNVPAGYDINQSLIDYNSQSSNLRAAMVGIINTLLVAFLACVTATILGVIAGVARLSK 120

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNR 174
           N LV+ +  VYVE+FRNIP L+ I  +Y  + +VLP P+          +L       NR
Sbjct: 121 NWLVSKLMSVYVEIFRNIPVLIWILMIYTLMTAVLPAPNKFRGDNATSSMLFDAFAFTNR 180

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G+  P       + I V +FVL I+ ++   R +     +TGK LP+ + +  ++     
Sbjct: 181 GIYIPEPVWGPGSMIVVATFVLSIIAAIIYRRYAVSLLFRTGKLLPMGWPTVAILLVPTI 240

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++   +   +  D P L  FNF GG  +    ++L++ALS YT AFIAE VR+G+ A+ +
Sbjct: 241 VMFFIMGSPIALDYPELKGFNFRGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISK 300

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-G 353
           GQ EAA +LGL  ++   LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ +  G
Sbjct: 301 GQTEAASSLGLRPKRVMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLG 360

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +NQTG+AIE +L+ M  YL++S+ I+  MN  N  ++LKE+
Sbjct: 361 GITLNQTGRAIECVLLLMLFYLTISLSISAIMNVYNNSVSLKER 404


>gi|126736639|ref|ZP_01752379.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter sp. CCS2]
 gi|126713952|gb|EBA10823.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter sp. CCS2]
          Length = 405

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 148/405 (36%), Positives = 218/405 (53%), Gaps = 9/405 (2%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           + +        F     L D R  + + Q I  +LL     +   N+  N+    L++  
Sbjct: 1   MTSVTDPPQGSFRLSMLLNDTRYRSYTFQFIALVLLIAFMAYLGINLVRNLAAQGLNISF 60

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FL + AG++I+Q  + Y S S++  A +VG +NT  +AF   + ATI G   G  RLS+
Sbjct: 61  SFLGDPAGYDINQRPIEYDSQSTHLRAAVVGILNTLIVAFLACVTATIFGVTAGVLRLSS 120

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNR 174
           N +V  +   YVE+FRNIP L+ I  ++  +   +P P           +L       NR
Sbjct: 121 NWVVRKLMSFYVEIFRNIPVLIWIIIIFSIMTVAMPAPRAFRGDNATSSMLFESFAFTNR 180

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFLIFGLP 233
           G+  P   +D  A   V    +  ++ +FA R  +      TG+ LP  + S  + F   
Sbjct: 181 GVYSPAPVIDGAAGWIVVGVFIASIIGIFAYRKFATKKLYDTGQLLPTFWPSVAMFFVPT 240

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV   L   +  D P L  FNF GG  +    ++L+ AL+ YT AFIAE VR+G+ A+ 
Sbjct: 241 ILVYFILGRPITLDYPSLQGFNFQGGLHLRGSLIALWFALAIYTGAFIAENVRAGIQAIS 300

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV- 352
           +GQ EAA +LGL   +   LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+ D+ S  
Sbjct: 301 KGQTEAAASLGLRPGRIMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYMDVTSTL 360

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GG  +NQTG+AIE IL+ M  YL++S++I+  MN  N  + L+E+
Sbjct: 361 GGITLNQTGRAIEAILLLMLFYLTISLLISGVMNVYNNSVKLQER 405


>gi|154248467|ref|YP_001419425.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
 gi|154162552|gb|ABS69768.1| binding-protein-dependent transport systems inner membrane
           component [Xanthobacter autotrophicus Py2]
          Length = 431

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 165/423 (39%), Positives = 232/423 (54%), Gaps = 34/423 (8%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
                 R     D ++ +  +QI+LAL++  +      N   N+ +  ++ G GFL  RA
Sbjct: 9   PPAASRRRWSWTDPKLRSSVIQIVLALIMVWLVWSFYANAQANLSRLGIASGFGFLDNRA 68

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF I Q ++PY    SY  A +VG +NT  +AF G++ AT+IG ++G  RLS N ++  +
Sbjct: 69  GFAISQTLIPYNESMSYGRAFVVGLLNTLLVAFLGVVLATLIGFVMGVARLSKNVVIKAL 128

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF--------------------- 167
              YVE+ RN+PPL  I F Y +VLS LP P  S                          
Sbjct: 129 ASAYVEITRNLPPLFQIMFWYLAVLSTLPGPRQSWGFGLQPLFGAIGSGLSAIGLGFLGT 188

Query: 168 ------------GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
                        +F+NNRGL  P    +  +   +++ +  +V S    R ++   E T
Sbjct: 189 PISNFAAGLAAPSVFVNNRGLVLPRPVFEEGSMAILYALIAAVVASFVLARWAKKRREAT 248

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           GK  P  +    L+  LP     A    +  + P L  FNF GG  V PEF++L +AL+ 
Sbjct: 249 GKPFPAFWAGLALLIALPLAASFAAGNPVTIETPELRGFNFAGGLKVIPEFVALLLALAI 308

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT  FIAEIVRSG++AV +GQ EAA +LGL +    RLV++PQAMR I+PPLTSQYLNL 
Sbjct: 309 YTGGFIAEIVRSGILAVSKGQSEAAHSLGLRNGPTLRLVIIPQAMRVIVPPLTSQYLNLT 368

Query: 336 KNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           KNSSL VAVG+ DL +V  GT +NQTGQAIEII + M +YL++SI+ +  M   N ++AL
Sbjct: 369 KNSSLGVAVGYPDLFAVFAGTTLNQTGQAIEIIAVTMAVYLTISILTSAIMGWYNKRVAL 428

Query: 395 KEK 397
            E+
Sbjct: 429 VER 431


>gi|149203334|ref|ZP_01880304.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035]
 gi|149143167|gb|EDM31206.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035]
          Length = 404

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 153/398 (38%), Positives = 218/398 (54%), Gaps = 8/398 (2%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     +YD R  + + Q I  +LL ++  +   N+ NN+     ++  GFLS  
Sbjct: 7   PPKASFQLSMLIYDTRYRSYTFQFIALVLLMLLLGYLGANLVNNLAAQGQNISFGFLSNP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           A ++I+Q  + Y S SS+  A LVG +NT  +AF G   ATI G   G  RLS N LV  
Sbjct: 67  ANYDINQRPIEYDSQSSHLRASLVGVINTLIVAFLGCATATIFGVTAGVLRLSPNWLVRK 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNRGLSFPT 180
           +   YVE+FRNIP L+ I  ++  + +VLP P+          +L       NRG+  P 
Sbjct: 127 LMAFYVEIFRNIPVLIWILIIFTVMTAVLPSPNQFRGDNADASMLFDAFAFTNRGIYTPA 186

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                 + + V +F+  I       R +      TG+ LP+ + S  ++F    L+   L
Sbjct: 187 PVWGPGSLVVVLTFLASIFGVFAYRRYATKLLYDTGRLLPMGWPSLVILFVPTILIYFVL 246

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  + P L  FNF GG  +    ++L+ AL+ YT AFIAE VR+G+ AV +GQ EAA
Sbjct: 247 GQPISLNYPALKGFNFDGGLHIRGSLIALWFALAIYTGAFIAENVRAGIQAVSKGQTEAA 306

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQ 359
            +LGL   +   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+    GG  +NQ
Sbjct: 307 ASLGLRPNRIMNLVILPQALRVIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQ 366

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG+AIE +L+ M  YL++S+ I+  MN  N  I LKE+
Sbjct: 367 TGRAIECVLMLMLFYLTISLAISAIMNVYNNSIKLKER 404


>gi|115524736|ref|YP_781647.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris BisA53]
 gi|115518683|gb|ABJ06667.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris BisA53]
          Length = 401

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 157/398 (39%), Positives = 234/398 (58%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   AR   +++ +R++     R     +++Q++    L  +     +NV  N+    ++
Sbjct: 1   MAIEARPPPSQWVARLRRAVGGRSGWKGLALQLLFVAALLWVGYEIADNVRGNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY+   SY    LVG VNT  ++  G+  ATI+G +V   R
Sbjct: 61  SGFGFMSQTAGFGVSQALIPYSESDSYTRVFLVGLVNTLVVSAIGIFFATILGFIVALCR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L+A I   YVE+ RN+P L  I F Y +VL  LP P  S+ L    FL+NRG+  
Sbjct: 121 LSPNWLLARIGGGYVELVRNLPLLFQILFWYLAVLGTLPSPRQSVSLFDAFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ +  + I  ++     +R    +TGK L +      L+ GLP L  +
Sbjct: 181 PKPVGEAGLDAFLIAVAIAIAAAIALPAFARRRLYQTGKPLKVWPAVLGLLIGLPLLASL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ P L  FNF+GG  + PEF++L +ALS YTAAFIAEIVR+G+ +V +GQME
Sbjct: 241 IAGQPFSFEIPALKGFNFVGGGRMPPEFVALTLALSTYTAAFIAEIVRAGIQSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RL+++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGATLRLIVIPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIEII + M +YL++S++ +  M+    ++   
Sbjct: 361 SQTGQAIEIIAVTMSVYLAISLVTSALMSFYGWRLGRS 398


>gi|156741439|ref|YP_001431568.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
 gi|156232767|gb|ABU57550.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
          Length = 396

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 156/401 (38%), Positives = 237/401 (59%), Gaps = 9/401 (2%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M    R T     SR  F  D R   I++QI+   L+  +    + N+  ++ +  L+LG
Sbjct: 1   MEAPPRPTSPLRLSRA-FWRDERFIQIAIQILFLALVIWVGSVALRNMLTSLRQQGLALG 59

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             FL+  AGF+I   ++ Y+S  ++A A+ VG +NT  ++  G++ AT++G +VG  RLS
Sbjct: 60  FDFLNSGAGFDISDALIAYSSSDTFARALQVGLLNTVVVSLLGIVLATLLGIVVGVARLS 119

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN---RGLS 177
           +N LV  +  V+VE+ RN+P LV++ F+Y +    LP    ++ +      N        
Sbjct: 120 SNWLVNRMAWVFVEIMRNVPLLVLLVFIYTAFFLKLPRARQAVNIGPVYLSNRGVAVPWG 179

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
            PT T      + V + + G ++     R      E++G+  PL++ S   I  +  +  
Sbjct: 180 EPTDTWSLYMSVLVGALIAGALVGFAMHRW----QEQSGRPRPLVWFSLLTIAVIAMVGW 235

Query: 238 IAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +AL +  L    P +  FNF GG  +SPEFM+L I L  YTA FI E+VR+G+ AVP+GQ
Sbjct: 236 VALPQPPLILSYPEIAGFNFQGGRVLSPEFMALLIGLVLYTAGFIGEVVRAGIQAVPKGQ 295

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALGLT  +  RLV+ PQA+R IIPP+T+QYLNL KNS+LAVA+G+ DL +V GTI
Sbjct: 296 VEAARALGLTPSRTLRLVVFPQALRLIIPPITNQYLNLTKNSTLAVAIGYPDLFAVSGTI 355

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           INQTG+A+E+I + M +YL LS++ +L MN  N ++ L E+
Sbjct: 356 INQTGRAVEMIAVVMAVYLILSLLTSLIMNWYNRRVRLVER 396


>gi|294675893|ref|YP_003576508.1| glutamate/aspartate ABC transporter permease BztB [Rhodobacter
           capsulatus SB 1003]
 gi|3182935|sp|Q52664|BZTB_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine transport
           system permease protein BztB
 gi|1655713|gb|AAB17887.1| BztB [Rhodobacter capsulatus SB 1003]
 gi|294474713|gb|ADE84101.1| glutamate/aspartate ABC transporter, permease protein BztB
           [Rhodobacter capsulatus SB 1003]
          Length = 426

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 155/425 (36%), Positives = 229/425 (53%), Gaps = 34/425 (8%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A       F     +YD R  +I++QI++ LL     +W +NN Y N+E         FL
Sbjct: 4   ASDPPKAGFRLSMLIYDTRFRSITIQIVVLLLFLAGLVWLLNNAYVNLEAKGKDFNFSFL 63

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
             RAG+++ Q ++PY++D ++  A++ G +NT  ++  G I ATI+GT++G  RLS N L
Sbjct: 64  WTRAGYDLAQTLIPYSNDDTHFRALIEGLLNTLLVSVLGCILATILGTIIGVLRLSQNWL 123

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP----------------IPDHSIVLPFG 168
           VA I  VYVE FRNIP L+ I  +   +    P                 P  S+     
Sbjct: 124 VARIMTVYVETFRNIPLLLWILLMGTILAETRPVPKDFRLTEAMKAAGEEPKASMWFFDS 183

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSF----------VLGIVLSLFA-----TRLSRHFHE 213
           + + NRG + P    D +  +    +          +L ++ + F         ++   E
Sbjct: 184 VAVTNRGTNLPAPAFDHSLGVVDLGWNLPVSLNALAILAVMSASFWGWRRFMARAKAVQE 243

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
            TG      + S  ++F   + +L  L +  H D P + +F+F GG  +   F +L IAL
Sbjct: 244 ATGTRPTTWWPSLLILFAPISALLYGLGF--HLDYPQITKFDFTGGFQMLHSFTALLIAL 301

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + YTAAFIAEIVR+G+ A+ RGQ EAA ALGL   +   LV+LPQA+R I+PPL SQ+LN
Sbjct: 302 TLYTAAFIAEIVRAGIQAISRGQTEAAYALGLRPGRTMSLVILPQALRVIVPPLISQFLN 361

Query: 334 LLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L KNSSLA+AV + DL    GG  +NQTG+ +E +L+ M IYL++S+ I+  MN  N  I
Sbjct: 362 LTKNSSLAIAVSYMDLRGTLGGITLNQTGRELECMLLMMLIYLTISLTISSLMNLYNKSI 421

Query: 393 ALKEK 397
            LKE+
Sbjct: 422 KLKER 426


>gi|87121083|ref|ZP_01076974.1| general amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
 gi|86163575|gb|EAQ64849.1| general amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
          Length = 391

 Score =  282 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 157/385 (40%), Positives = 228/385 (59%), Gaps = 2/385 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S    L D     I  Q++L  ++  +  +  +N+  N+    +S G  FL++ AGF + 
Sbjct: 8   SNKSLLNDAGTRAIIFQVVLLAVVVFVSYYLFSNLQANLANQGISTGFEFLNQPAGFPVL 67

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ YT   +Y  A +V  +NT  ++  G+I AT+IG ++G  RLS N LVA +  VYV
Sbjct: 68  IHLIEYTEADTYGRAFIVALINTIVISLMGIILATVIGVVMGLARLSNNWLVARLATVYV 127

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E  RNIP L+ +FF Y +VL+ LPIP +SI+     FLN RG+  P           +  
Sbjct: 128 ETLRNIPLLLQMFFWYFAVLATLPIPKNSIIFGD-FFLNKRGIYSPNPLFQEGFGFVIAG 186

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FV+ I+ S+     ++     TG   P  + S  LI  +  L L    + + FD P   +
Sbjct: 187 FVISIIASIALIVWAKRRQTITGLWFPAYWASLGLIVVITFLALAISGFPIEFDLPQKSR 246

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FN  GG  + PEF+++ +ALS YT AFIAEIVR+G+++V  GQ EAA +LGL      RL
Sbjct: 247 FNVTGGMVLPPEFVAVLVALSTYTGAFIAEIVRAGILSVNWGQTEAARSLGLKDSLTQRL 306

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMF 372
           ++LPQA+R IIPPLTSQ+LNL KNSSL  A+ + +LV+ V GT +NQTGQAIE I + M 
Sbjct: 307 IVLPQALRVIIPPLTSQFLNLAKNSSLGAAIAYPELVAVVMGTTLNQTGQAIENIGLCML 366

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +Y +LS+ I++FMN  N K++L E+
Sbjct: 367 VYGTLSLTISIFMNWYNKKMSLTER 391


>gi|99080136|ref|YP_612290.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99036416|gb|ABF63028.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 422

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 144/418 (34%), Positives = 221/418 (52%), Gaps = 30/418 (7%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     +YD R  + ++Q++  +   ++    ++N   N+          FLSE 
Sbjct: 7   PPKETFRLSMLIYDTRYRSATIQVVALIGFLILVGSIISNTAQNLADLGKEPSFRFLSEP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q ++ Y +  S+  A L+G +NT  +A  G I ATI+G ++G  RLS+N LVA 
Sbjct: 67  AGYDINQRLLDYDNQDSHMRASLMGLLNTLVVAVLGCITATILGVIIGVLRLSSNWLVAR 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI---------------------VLP 166
           +  VYVE+FRN+P L+ I F+   ++  LP P                          +P
Sbjct: 127 LMAVYVEMFRNVPLLLWIVFIMAILIETLPAPRAFRGENPEATMSVFDSVAVTNRGVYVP 186

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR------LSRHFHEKTGKALP 220
             +F N+ G             + +    L +VL             +    E TG    
Sbjct: 187 EPLFHNSLGNIGVFGDSAVRFDVSLDLIALLVVLGASLYVSKRIRLWADQTQESTGLRPT 246

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             ++ + ++     L+L  L +  H   P L  FNF GG+ +    ++L++ALS YTAAF
Sbjct: 247 TWHMRSAVVVLPSALLLFVLGF--HLGYPALKGFNFAGGTHLRNSLIALWLALSLYTAAF 304

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEIVRSG++A+ +GQ EAA ALGL  ++   LV+LPQA+R IIPPL S YLNL KNSSL
Sbjct: 305 IAEIVRSGILAISKGQTEAAAALGLRPKRIMNLVILPQALRVIIPPLISNYLNLTKNSSL 364

Query: 341 AVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+AVG+ DL     G  +NQTG+ +E +L+ M +YL++S++I+  MN  N ++ L E+
Sbjct: 365 AIAVGYMDLTGTLMGITMNQTGRELETVLLGMLVYLTISLLISSVMNWYNNRVKLVER 422


>gi|146340849|ref|YP_001205897.1| putative amino acid transport protein, permease [Bradyrhizobium sp.
           ORS278]
 gi|146193655|emb|CAL77672.1| putative amino acid transport protein, permease protein
           [Bradyrhizobium sp. ORS278]
          Length = 401

 Score =  282 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 157/398 (39%), Positives = 243/398 (61%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   AR    +Y  R+K +   +   + I +QI+   +L  +    V N  +N+    ++
Sbjct: 1   MSIEARLPPPQYGLRLKRMLGGKAGWNGIILQILFVAVLVWVGYEIVANARSNLAAQRIT 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GFL+  AGF+++Q ++ Y+   SY+  ++VG +NT  ++  G++ ATI+G +V  GR
Sbjct: 61  SGFGFLNNTAGFDVNQALISYSGSDSYSRVLMVGILNTLLVSVIGIVLATILGLIVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ +   YVE+ RN+P L  I F Y +VL+ LP P  SI +    FLNNRG   
Sbjct: 121 LSPNGLLSRVAGAYVELIRNLPLLFQITFWYLAVLAALPGPRQSISVFSTFFLNNRGFIV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ +  + I  S+     +R      G A+ +      ++ GLP L L+
Sbjct: 181 PRPIEEPGLMPFLIALGVAIAGSIGLRFYARRELFVRGHAMRIWPYVLGMLIGLPLLALV 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                + F+ PVL  FNF GGS + PEF++L +AL+ YTA+FIAE+VR G+++V +GQME
Sbjct: 241 VFGAPVAFEVPVLKGFNFAGGSRIIPEFVALTLALTMYTASFIAEVVRGGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A ++LGL+     RL+++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DLVSV  GT +
Sbjct: 301 AGLSLGLSRGTVLRLIVVPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLVSVFAGTTM 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIEII I M +YL++S++ +  M+  + ++  +
Sbjct: 361 SQTGQAIEIIGITMGVYLAMSLITSAIMSFYSWRLGKR 398


>gi|254463663|ref|ZP_05077074.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
 gi|206684571|gb|EDZ45053.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
          Length = 389

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 147/372 (39%), Positives = 228/372 (61%)

Query: 26  NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSY 85
           ++  Q  + +++  I     +N   N+    +  G  FL   AG  I   ++ Y+   SY
Sbjct: 18  SLLSQGGVLVVVIAILYVLFSNTQENLAIRGIESGFAFLGHEAGLPIGDSLIDYSPTRSY 77

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A LVG +NT +++   ++ +T++G ++G  R+S N L+A    +YVE  RN+P L+ +
Sbjct: 78  GYAFLVGILNTLFVSVLAIVFSTLLGIVIGVARVSRNWLLARGAAIYVETLRNLPLLLTL 137

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           FF+Y  VL+ LP P  +I L  G+FL+ RG   P    +    +F+ +  + +VL++   
Sbjct: 138 FFIYTVVLAALPHPRDAIALSDGVFLSKRGFYLPRPVAEDGIGLFLGASAVALVLAVMFW 197

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R ++ +  +TG+++  L  +  +   L  L  +A    L  + PV   FNF GG ++ PE
Sbjct: 198 RWAKSYKVRTGRSVSGLRGALAIFLALSGLAFLASGQPLTSELPVYQGFNFKGGLSIKPE 257

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F SL I L  YTAA++AE VRSG+ +V  GQ+EAA ALG++    TR+VLLPQA+R  IP
Sbjct: 258 FASLLIGLVLYTAAYVAENVRSGIQSVHAGQIEAANALGVSSGVVTRMVLLPQALRVTIP 317

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             T+ Y +L+KNSSLAVA+G+ D+VSVGGTII Q GQAIEII +WM +YL+++++I+L M
Sbjct: 318 ATTNDYASLVKNSSLAVAIGYPDMVSVGGTIIGQNGQAIEIIAMWMAVYLTINLIISLGM 377

Query: 386 NRLNAKIALKEK 397
           N LNA++ L E+
Sbjct: 378 NMLNARVQLVER 389


>gi|83854940|ref|ZP_00948470.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Sulfitobacter sp. NAS-14.1]
 gi|83842783|gb|EAP81950.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Sulfitobacter sp. NAS-14.1]
          Length = 401

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 154/400 (38%), Positives = 232/400 (58%), Gaps = 8/400 (2%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
                  F     L D R  + + Q I  +LL  +  +   N+  N+ ++ L++  GFL+
Sbjct: 2   SDPQQGSFRLSMLLNDTRYRSYTFQFIALILLIALMSFLGINLVRNLAEAGLNISYGFLN 61

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
             AG++I+Q ++ Y S SS   A +VG +NT  +AF   I ATI+G + G  RLS N LV
Sbjct: 62  VPAGYDINQSLIDYNSQSSNLRAAMVGIINTLLVAFLACITATILGVIAGVARLSKNWLV 121

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNRGLSF 178
           + +  VYVE+FRNIP L+ I  +Y  + +VLP P+          +L       NRG+  
Sbjct: 122 SKLMSVYVEIFRNIPVLIWILMIYTLMTAVLPAPNKFRGDNATSSMLFDAFAFTNRGIYI 181

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P       + I V +FVL I+ ++   R +     +TGK LP+ + +  ++     ++  
Sbjct: 182 PAPVWGPGSMIVVATFVLSIIAAIIYRRYAVSLLFRTGKLLPMGWPTVAILLVPTIVMFF 241

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +   +  D P L  FNF GG  +    ++L++ALS YT AFIAE VR+G+ A+ +GQ E
Sbjct: 242 IMGSPIALDYPELKGFNFRGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISKGQTE 301

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           AA +LGL  ++   LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ +  GG  +
Sbjct: 302 AASSLGLRPKRVMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITL 361

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           NQTG+AIE +L+ M  YL++S+ I+  MN  N  ++LKE+
Sbjct: 362 NQTGRAIECVLLLMLFYLTISLSISAIMNVYNNSVSLKER 401


>gi|309791171|ref|ZP_07685703.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
 gi|308226733|gb|EFO80429.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
          Length = 398

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 147/395 (37%), Positives = 226/395 (57%), Gaps = 6/395 (1%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
             ++  +R+ F  D R+  + +QII   ++     +  +N+   + +SNL     FLS+ 
Sbjct: 5   PPSQQQARIPFYRDTRIIAVLLQIIFLFVVVGFIWFLYSNMMAGLRRSNLLPNYSFLSQP 64

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF I +  +PY    +Y  A ++G +NT  ++  G++ ATI+G ++G  RLS+N L+  
Sbjct: 65  AGFPISESPIPYDPGRTYGYAFIIGVLNTLRVSVIGVVLATILGVIIGISRLSSNWLLRS 124

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +   YVE+ RNIP L+ +FF    +    P    SI L   ++L+NRG++   +   ++ 
Sbjct: 125 VATGYVELVRNIPLLLQLFFWM-IMSQAFPRIQDSINLGGLLYLHNRGVTLTWMREGSSF 183

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-----KY 242
             ++    +G +  +      R    +  +    L  +  L  G+  +  I L      +
Sbjct: 184 GAWLIWIGIGGLAGVILYIARRIQFVRRDRPGVALPWALLLAAGVALVGFIILRISSGTW 243

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L  D P L +F+F GG T++  F +L + L  YTA +I EIVRSG+ AV +GQ EAA A
Sbjct: 244 PLALDIPELQRFSFQGGITITTNFAALIMGLVIYTAVYIGEIVRSGIQAVNKGQREAARA 303

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGLT  +  RLV+ PQA+R +IPP+TSQYLNL KNSSLAVA+GF DL SV GT +NQTGQ
Sbjct: 304 LGLTPGQTLRLVIFPQALRIMIPPMTSQYLNLTKNSSLAVAIGFPDLFSVAGTTLNQTGQ 363

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + ++LI M  YLS+S++ +L MN  N +I L E+
Sbjct: 364 TVPVMLIVMLSYLSVSLVTSLLMNWYNKRIQLVER 398


>gi|260432481|ref|ZP_05786452.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416309|gb|EEX09568.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 410

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 148/406 (36%), Positives = 226/406 (55%), Gaps = 18/406 (4%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     + D R  +++ Q+I A+++ +   +  NN+  N+  + L++   FL + 
Sbjct: 7   PPKSDFRLSMLINDTRYRSLTFQVIAAIVIALSIWYLGNNLIQNLRAAGLNISFAFLGDP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q +V Y S SS+  A +VG +NT  +A    I ATI G + G  RLS N LV+ 
Sbjct: 67  AGYDINQRLVEYDSQSSHGRAAIVGILNTLLVAVLACITATIFGVIAGVLRLSKNWLVSK 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS--------IVLPFGMFLNNRGLSFP 179
           I  +YVE+FRNIP L+ I  ++  + +V+P P           ++     F N       
Sbjct: 127 IMAIYVEIFRNIPVLIWIIIIFTIMTAVMPGPREFRGDNPTSSMLFDLFAFTNRGVYIPR 186

Query: 180 TLTMDTNAKIFVFSFVL---GIVLSLFA----TRLSRHFHEKTGKALPLLYISTFLIFGL 232
               +      + +++L   G+V S FA     + +    E+TG           +    
Sbjct: 187 PEFSNGLFGSAILNWLLVLAGLVGSWFASHEIEKRATLKQEQTGDRPKTFLPKLAVWLVP 246

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             ++++ +   L +D P L  FNF GG  V    ++L+ ALS YT AFIAE VR+G+ A+
Sbjct: 247 FLILMVLMG--LTWDVPELKGFNFSGGIKVGGPLIALWFALSIYTGAFIAENVRAGIQAI 304

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ALGL   +  +LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ + 
Sbjct: 305 SKGQTEAAAALGLRPGQIMKLVILPQALRVIIPPLISQYLNITKNSSLAIAVGYADITAT 364

Query: 353 -GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            GG  +NQTG+AIE +L+ M  YL+ S++I+  MN  NA + LKE+
Sbjct: 365 LGGITLNQTGRAIECVLLLMLFYLTASLLISAVMNVYNASVKLKER 410


>gi|90424049|ref|YP_532419.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           BisB18]
 gi|90106063|gb|ABD88100.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris
           BisB18]
          Length = 401

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 164/398 (41%), Positives = 238/398 (59%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVH--NISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   AR   T++ +R++ L   R     + +Q++    L  +    V+N   N+    ++
Sbjct: 1   MAIEARPPPTQFVARLRRLLGGRAGWGGLLLQVLFVAALVWVAYEIVDNARGNLANQRIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GF+S+ AGF + Q ++PY+   SY    LVG VNT  ++  G+I ATIIG +V  GR
Sbjct: 61  SGFGFMSQTAGFGVSQALIPYSEADSYTRVFLVGLVNTLVVSIIGIIFATIIGFMVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I   YVE+ RN+P L  I F Y +VL  LP P  S+ +    FL+NRG+  
Sbjct: 121 LSPNWLLSKISGGYVELVRNLPLLFQILFWYLAVLGTLPSPRQSVSVFDAFFLSNRGIVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    +     F+ +  + I +++     +R    +TGK + +   +  L+ GLP L  +
Sbjct: 181 PKPVGEAGLDAFLIAVAVAIAIAMMLPAYARRRLFQTGKPMKVWPFALSLLIGLPLLATL 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ P L  FNF GGS V+PEF++L +ALS YTAAFIAEIVR+G+ +V +GQME
Sbjct: 241 IFGKPFSFEIPALKGFNFAGGSRVAPEFVALTLALSTYTAAFIAEIVRAGIQSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RLV++PQA+R I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRGSTLRLVVVPQALRVILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIEII I M +YL +SI+ +  M+    ++   
Sbjct: 361 SQTGQAIEIIAITMSVYLLISIVTSALMSFYGWRLGRS 398


>gi|304391888|ref|ZP_07373830.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein BztB [Ahrensia sp. R2A130]
 gi|303296117|gb|EFL90475.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein BztB [Ahrensia sp. R2A130]
          Length = 400

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 149/391 (38%), Positives = 220/391 (56%), Gaps = 2/391 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
               F   +  YD R  +I++QII   +  ++  W V NV  N E    + G  FL + A
Sbjct: 10  PAEPFRLSQLFYDQRYRSITLQIITIAVFMLMVSWLVTNVIQNFEDLGKTFGFDFLWQPA 69

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            ++I+Q ++ Y+S S +  A +VG +NT  +AF G I ATIIG  VG  RLS N LVA +
Sbjct: 70  SYDINQKLIEYSSVSPHWKAAIVGILNTLVVAFLGCILATIIGVAVGVARLSKNWLVAKL 129

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             V++E  RN+P L+ I        S LP P  + V+  G F+      +    +  +  
Sbjct: 130 MTVFIEAMRNVPVLLWILLASTVFSSALPSPRQAPVMLGGGFVPTNRGFYVPAPVFNDGS 189

Query: 189 IFV-FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           I +   F+  I+ +    R +     +TG  LP+  I+  ++     ++   L   +  +
Sbjct: 190 IILGIIFIASIIGAFIFRRWAAARQARTGDILPVFRITMAILILPVFVMFFLLGMPIGLE 249

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L  FNF GG  +   FM+L++ALS YTAAFIAE VR+G+ A+  GQ EAA +LGL  
Sbjct: 250 LPELQGFNFQGGLYIRSSFMALWLALSFYTAAFIAENVRAGIQAISNGQSEAAYSLGLPP 309

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEI 366
            +   LV+LPQA+R IIPPL SQYLNL KNSSLA+AVG+ D+    GG  +NQTG+ +E 
Sbjct: 310 SRTMNLVILPQALRIIIPPLISQYLNLTKNSSLAIAVGYMDVTGTLGGITLNQTGREMEC 369

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L+ M  YL +S++I+  MN  N  ++L+E+
Sbjct: 370 LLLVMGFYLIISLLISGAMNIYNNSVSLRER 400


>gi|254488695|ref|ZP_05101900.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter sp. GAI101]
 gi|214045564|gb|EEB86202.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter sp. GAI101]
          Length = 404

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 153/404 (37%), Positives = 228/404 (56%), Gaps = 8/404 (1%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           +          F     L D R  + + Q I  +LL  +  +   N+  N+ ++ L++  
Sbjct: 1   MTTMSDPQQGSFRLSMLLNDTRYRSYTFQFIALMLLIALMAFLGINLVRNLAEAGLNISY 60

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FL   AG++I+Q ++ Y S S+   A +VG +NT  +AF   + ATI+G + G  RLS 
Sbjct: 61  DFLGVPAGYDINQTLIDYNSQSTNLRAAVVGIINTLLVAFLACLTATILGVIAGVARLSN 120

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNR 174
           N LV+ +  VYVE+FRNIP L+ I  +Y  + +VLP P+          +L       NR
Sbjct: 121 NWLVSKLMAVYVEIFRNIPVLIWILMIYTLMTAVLPAPNAFRGDNPSSSMLFDAFAFTNR 180

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           G+  P       + I V +F L I+      R +     +TGK LPL + +  ++     
Sbjct: 181 GVYIPAPVWGPGSMIVVATFTLSIIAVFLYRRYAVKLLFETGKLLPLGWPTLAILIVPTL 240

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV   +   +  D P L  FNF GG  +    ++L++ALS YT AFIAE VR+G+ A+ +
Sbjct: 241 LVFFVMGSPIGLDYPALRGFNFQGGLQIGAPLIALWLALSVYTGAFIAENVRAGIQAISK 300

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-G 353
           GQ EAA +LGL  ++   LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ +  G
Sbjct: 301 GQTEAAASLGLRPKRVMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLG 360

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +NQTG+AIE +L+ M  YL++S+ I+  MN  N  ++LKE+
Sbjct: 361 GITLNQTGRAIECVLLLMLFYLTISLSISAIMNVYNNNVSLKER 404


>gi|163848772|ref|YP_001636816.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus aurantiacus J-10-fl]
 gi|222526722|ref|YP_002571193.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus sp. Y-400-fl]
 gi|163670061|gb|ABY36427.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus aurantiacus J-10-fl]
 gi|222450601|gb|ACM54867.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus sp. Y-400-fl]
          Length = 400

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 155/397 (39%), Positives = 229/397 (57%), Gaps = 6/397 (1%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
             +V      + F  D R+  I VQ++ A+L+  +  +  +N+ N + ++NL     FLS
Sbjct: 5   SPSVPPGKINIPFYRDTRIIAIIVQVVFAILVIALVWFLYSNMINGLRQANLLPTFSFLS 64

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
             AGF I + ++ Y    +Y  A +VG +NT  +A  G+I AT++G ++G  RLS N L+
Sbjct: 65  VPAGFPISESVIEYDPSMTYGRAFIVGILNTVRVAVIGIILATLLGLILGIARLSDNWLL 124

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             +  VYVE+ RN+P L+ + F + S+  + P    SI +   MFL+NRG++        
Sbjct: 125 RNVALVYVEIVRNVPLLLQLIFWF-SLTRLFPRIQESIDVGGLMFLHNRGITLAWPQAGN 183

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK---- 241
           +   ++     GIV+ +    + R    +  +    L  +  +  G+  L  +       
Sbjct: 184 DFDAWMVWVYAGIVIGIVFYVVRRIQFVRRDRPGVALPYALLIALGVALLGFLVTYLTTG 243

Query: 242 -YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + +    PVL +FNF GG TV+  F +L I L  YTA FI EIVRSG++AV +GQ EAA
Sbjct: 244 VWPVSLSIPVLQRFNFDGGITVTNSFAALLIGLVIYTAVFIGEIVRSGILAVSKGQREAA 303

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGLT  +  RLV+LPQA+R IIPPLTSQYLNL KNSSLA+A+ + DL  V  TI NQT
Sbjct: 304 RALGLTPGQTMRLVILPQALRVIIPPLTSQYLNLTKNSSLAIAIAYPDLFYVANTINNQT 363

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQA+ +IL+ M  YLS+S++ +LFMN  N +I L E+
Sbjct: 364 GQAVPVILMLMASYLSVSLLTSLFMNWYNRRIQLVER 400


>gi|261213749|ref|ZP_05928030.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915356|gb|EEX82217.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
          Length = 372

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 142/316 (44%), Positives = 196/316 (62%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAV 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPK 250

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   + 
Sbjct: 251 LGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQT 310

Query: 311 TRLVLLPQAMRSIIPP 326
            RL+++PQA+R IIPP
Sbjct: 311 MRLIIVPQALRIIIPP 326


>gi|27379558|ref|NP_771087.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27352710|dbj|BAC49712.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 401

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 162/398 (40%), Positives = 244/398 (61%), Gaps = 3/398 (0%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRV--HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M   ARK   +   +++ +   +   + ++VQ   A +L  I    V+N   N+E  +++
Sbjct: 1   MSTEARKPPAQIALKIRRILGGKAGWNGVAVQFAFAAILGWIGYEIVSNARANLENQHIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GFL   AGF+++Q ++ YT   ++    +VG +NT  ++  G+  AT+IG +V   R
Sbjct: 61  AGFGFLRNNAGFDVNQTLISYTGSDTFLRVFIVGLLNTLVVSVVGIFFATVIGFIVALCR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L++ I  +YVE+ RN+P L  I F Y +VL+ LP P  SI L    F++NRGL  
Sbjct: 121 LSPNWLLSRIGELYVEIIRNLPLLFQILFWYLAVLAALPNPRQSISLLGIAFVSNRGLVI 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P    ++  + F+   VLGIV SL     +R    + G+ + +      L+FGLP + ++
Sbjct: 181 PRPIGESGFEPFLAMLVLGIVASLALRFHARRALFQRGQVIRIWPYVLGLLFGLPVVTML 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  F+ P L  FNF GGS + PEF++L +ALS YTAAFIAEIVR+G+++V +GQME
Sbjct: 241 VFGLPFTFELPQLKGFNFAGGSRIIPEFVALTVALSTYTAAFIAEIVRAGILSVHKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RL+++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DLVSV  GT +
Sbjct: 301 AGSSLGLSRGTTLRLIVVPQAMRVIVPPLTNQYLNLTKNSSLAVAIGYPDLVSVFAGTSL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +QTGQAIEII + M +YL +S++ +  M+    +++  
Sbjct: 361 SQTGQAIEIIAMTMGVYLLISLVTSAVMSVYGWRVSRS 398


>gi|77462292|ref|YP_351796.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Rhodobacter sphaeroides 2.4.1]
 gi|126461168|ref|YP_001042282.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|221638146|ref|YP_002524408.1| Polar amino acid ABC transporter inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|77386710|gb|ABA77895.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Rhodobacter sphaeroides 2.4.1]
 gi|126102832|gb|ABN75510.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|221158927|gb|ACL99906.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 420

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 164/422 (38%), Positives = 229/422 (54%), Gaps = 28/422 (6%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           + N        F     LYD R  ++++Q+ +  L      W V+N   N+E        
Sbjct: 1   MANVADAPKDSFRLSMLLYDTRYRSLTIQVFVFFLFMAGAAWLVDNTMRNLEALGKDFDF 60

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           GFL  RAG++I Q +V YT+DS++  A+LVG +NT  +A  G + AT+IG LVG  RLS 
Sbjct: 61  GFLWNRAGYDISQRLVDYTNDSTHGRAMLVGLLNTLLIALLGCMAATVIGVLVGVLRLSR 120

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR------- 174
           N +V  +  VYVEVFRN+P L+ I  +Y       P P+     P     +         
Sbjct: 121 NWIVGRLMTVYVEVFRNVPLLLWILLIYAVFSEATPAPNAFRPNPETGIADRSMFLDAIA 180

Query: 175 ------------------GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                              L      ++ +    + + + G  ++      +    E TG
Sbjct: 181 VTNRYTALPNPVFSRELGWLDLGLFYVNMDVLAVIGAIIAGWFINRSVKARATRIQEATG 240

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +     + S  L+ GLP  VL+AL + L F  P L  FNF+GG  VS  FM+L++ALS Y
Sbjct: 241 ERPATWWSSLLLLVGLPVAVLLALGFHLEF--PELRGFNFVGGLNVSNSFMALWLALSLY 298

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T AFIAEIVR G++AV RGQ EAA ALGL   +   LV+LPQA+R IIPPL SQYLNL K
Sbjct: 299 TGAFIAEIVRGGILAVSRGQSEAAFALGLRPGRTMNLVILPQALRVIIPPLISQYLNLTK 358

Query: 337 NSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           NSSLA+AVG+ DL    GG  +NQTG+ +E +L+ M IYL++S++I+  MN  N+ + LK
Sbjct: 359 NSSLAIAVGYLDLRGTLGGITLNQTGRELECVLLMMLIYLAISLVISGVMNVYNSAVKLK 418

Query: 396 EK 397
           E+
Sbjct: 419 ER 420


>gi|260778551|ref|ZP_05887443.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604715|gb|EEX31010.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 347

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 164/347 (47%), Positives = 229/347 (65%), Gaps = 1/347 (0%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111
           ME   ++ G GFL++ AGF I   ++ Y    SY    ++G +NT  ++  G+I AT+IG
Sbjct: 1   MEARGIATGFGFLTQEAGFGIGLTLIEYDETYSYGRTFIIGLLNTALVSVLGIILATVIG 60

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            ++G  RLS+N LV+ +  VY+E FRNIP L+ IFF Y +VL  LP    S+ L   +FL
Sbjct: 61  FVMGIARLSSNWLVSRLAAVYIETFRNIPLLLQIFFWYFAVLQALPSARQSLSLGEAIFL 120

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N RGL FP+   +  + I + SFV+GI+ ++F +  +R+    TG+  P+  I+  LI  
Sbjct: 121 NVRGLYFPSPIFEAGSSIVIASFVIGIIATVFISIWARNKQRLTGQQTPMGRIALGLIVV 180

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            PT+V   +   +  + P L  FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ A
Sbjct: 181 FPTVVYFLMGSPISAEYPELKGFNFKGGVSIIPELAALLLALSIYTASFIAEIVRSGINA 240

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA++LGL   +  +LV++PQA+R IIPPLTSQYLNL KNSSLA+A+G+ DLVS
Sbjct: 241 VSHGQTEAAMSLGLPRSRTLKLVIVPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVS 300

Query: 352 V-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V  GT +NQTGQAIEII + M +YLSLS++ +  MN  N K+AL E+
Sbjct: 301 VFAGTTLNQTGQAIEIIAMTMAVYLSLSLITSALMNIYNRKVALVER 347


>gi|163733775|ref|ZP_02141217.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter litoralis Och 149]
 gi|161392886|gb|EDQ17213.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Roseobacter litoralis Och 149]
          Length = 389

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 155/388 (39%), Positives = 224/388 (57%), Gaps = 8/388 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            + D R  +++ Q I  L L V   +  NN+  N+    L++  GFL + AG++I+Q ++
Sbjct: 2   LINDTRYRSMTFQAIALLALIVAIAYLANNLLTNLAAQGLNISYGFLGDPAGYDINQRLI 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S SS A A +VG +NT  +AF   I AT+ G + G  RLS N LVA +   YVE+FR
Sbjct: 62  EYDSQSSNARAAVVGILNTLLVAFLACIMATVFGVIAGVLRLSNNWLVAKLMSFYVEIFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI-------VLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           NIP L+ I  ++  + +V+P P           +L       NRG+  P       + + 
Sbjct: 122 NIPVLIWIIIIFTIMTAVMPAPRAFRGDEPEATMLLGAFAFTNRGIYIPAPIWGPGSMVV 181

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +F+  IV      R + +   +TG+ LP+ + S  + F    ++   +   +  D PV
Sbjct: 182 VATFIASIVGVFAYRRYATNLLYETGRLLPMGWPSLAIFFVPTIVMFFIMGRPVGLDMPV 241

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           LG FNF GG  +    ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL   + 
Sbjct: 242 LGGFNFQGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAASALGLRPGRV 301

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILI 369
             LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ +  GG  +NQTG+AIE +L+
Sbjct: 302 MNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITATLGGITLNQTGRAIECVLL 361

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M  YL +S+ I+  MN  N  + LKE+
Sbjct: 362 LMLFYLVISLSISAIMNVYNKTVTLKER 389


>gi|329295741|ref|ZP_08253077.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 359

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 134/358 (37%), Positives = 201/358 (56%), Gaps = 5/358 (1%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           + R TV + FS      +  V     QI+  + +  +  + ++N   N+    ++ G GF
Sbjct: 2   SQRPTVKKDFSFG----NPTVRAWLYQIVAIVAVFAVVGYLIHNTVINLANRGITSGFGF 57

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   AGF I Q ++ Y+   +YA   +VG  NT  ++   ++ A+I+G  +G  RLS N 
Sbjct: 58  LERNAGFGIVQHLIDYSEGDTYARVFMVGLTNTLLISALCIVFASILGFAIGLARLSDNW 117

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+  +  +Y+E FRNIPPL+ IFF Y +VL  LP P  ++      F++NRGL  P    
Sbjct: 118 LLRKLSTIYIETFRNIPPLLQIFFWYFAVLRNLPGPRQALNAFDLAFVSNRGLYIPWPEY 177

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + +  + I       R +R    KTG+       +  LI  LP +        
Sbjct: 178 APSTWPSLIALAIAIAAIAALFRFNRKHQLKTGQLRRTWPAAAGLIVLLPLIAHTLFGAA 237

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            H+D P L  FNF GG  + PE  +L +ALS YT++FIAE++R+G+ +VP GQ EAA +L
Sbjct: 238 THWDVPELRGFNFRGGFAMIPELAALTLALSIYTSSFIAEVIRAGIQSVPHGQSEAARSL 297

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360
           GL +    R V++PQAMR IIPPLTSQYLN++KNSSLA A+G+ D++S+  GT++NQ 
Sbjct: 298 GLPNPVTLRQVIIPQAMRVIIPPLTSQYLNIIKNSSLAAAIGYPDMMSLFAGTVLNQY 355


>gi|119383546|ref|YP_914602.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373313|gb|ABL68906.1| L-asparagine ABC transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-glutamate ABC
           transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 417

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 152/411 (36%), Positives = 225/411 (54%), Gaps = 25/411 (6%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
              F     +YD R  ++++Q I+ +L+ +   W ++N   N+     +L   FL  RAG
Sbjct: 9   NPPFRLSMLIYDRRYRSLTLQAIVFILVMLAASWLIDNTLRNLSAMGKTLSFDFLFRRAG 68

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           ++I Q ++PY SD ++  A ++G +NT  ++  G I ATI+G +VG  RLS+N L+A + 
Sbjct: 69  YDIPQQLIPYNSDDTHLRATVIGLLNTLLVSILGCIAATILGVIVGVLRLSSNWLIARLM 128

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIP-------DHSIVLPFGMFLNNRGLSFPTLT 182
            VYVEVFRNIP L+ I         V+P P         + ++ F M       +     
Sbjct: 129 TVYVEVFRNIPLLLWILVCLAIFTEVMPPPNAYRGENPAANMILFDMIAPTNRYTAIPSI 188

Query: 183 MDTNAKIFVFSFVLGIVLSL---------------FATRLSRHFHEKTGKALPLLYISTF 227
             TN    +     GI  +                     ++   ++TGK     +IS  
Sbjct: 189 GMTNPPGTISLGREGISWAFIAFAVVIAAAWTGWRVLRNWAQRVQDRTGKRPRTWWISLA 248

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +         +   + LH   PVL  FNF  G  +   F+ L++AL+ YT AFIAEIVR+
Sbjct: 249 MFVVPVL--FLTWYFGLHLVPPVLRGFNFADGINLDNAFVVLWLALTLYTGAFIAEIVRA 306

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++AV RGQ EAA ALGL  R+   LV+LPQA+R I+PPL SQYLNL KNSSLA+AVG+ 
Sbjct: 307 GILAVSRGQTEAAFALGLRPRRTMSLVVLPQALRVIVPPLISQYLNLTKNSSLAIAVGYM 366

Query: 348 DLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           DL    GGT +NQTG+ +E +++ M IYL+LS++I+  MN  N+++ LKE+
Sbjct: 367 DLRGTLGGTTLNQTGREMEAMVLMMGIYLALSLIISAGMNIFNSRVKLKER 417


>gi|219847286|ref|YP_002461719.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus aggregans DSM 9485]
 gi|219541545|gb|ACL23283.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus aggregans DSM 9485]
          Length = 400

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 152/397 (38%), Positives = 219/397 (55%), Gaps = 6/397 (1%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
              +      + F  D R+  I VQ++ AL +  +  +  +N+ N + ++NL     FLS
Sbjct: 5   SPPLPSGKVNIPFYRDTRIIAIIVQVVFALAVVALLWYLYSNMMNGLRQANLLPTFAFLS 64

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
             AGF I + ++ Y    +Y  A +VG +NT  +A  G+I AT++G ++G  RLS N L+
Sbjct: 65  VPAGFPISESVIEYDPSKTYGQAFIVGILNTIRVAGIGIILATLLGLILGIARLSDNWLL 124

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG---LSFPTLT 182
             +  VYVE+ RNIP L+ + F +        I +   V       N             
Sbjct: 125 RNVALVYVEIVRNIPLLLQLIFWFSLTRLFPRIQESIEVGGLMFLHNRGVTLAWPQTAND 184

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV--LIAL 240
            D          V+GI+  +   R+     ++ G ALP   +  F I  +  L+  ++  
Sbjct: 185 FDKWMWWVYGGIVIGIIFYVVR-RIQFARRDRPGVALPYAILIAFAIALVGFLLSYVLYG 243

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + +    P L +FNF+GG TV+  F +L + L  YTA FI EIVRSG++AV +GQ EAA
Sbjct: 244 AWPVSLSIPELQRFNFVGGITVTNSFAALLVGLVIYTAVFIGEIVRSGILAVSKGQREAA 303

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGLT  +  RLV+LPQA+R IIPPLTSQYLNL KNSSLA+AV + DL  V  TI NQT
Sbjct: 304 RALGLTPGQTMRLVILPQALRVIIPPLTSQYLNLTKNSSLAIAVAYPDLFYVANTINNQT 363

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQA+ +IL+ M  YLS+S++ +LFMN  N +I L E+
Sbjct: 364 GQAVPVILMLMVSYLSVSLLTSLFMNWYNRRIQLVER 400


>gi|294084020|ref|YP_003550777.1| glutamate/glutamine/aspartate/asparagine transport system permease
           [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663592|gb|ADE38693.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 395

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 145/394 (36%), Positives = 236/394 (59%), Gaps = 2/394 (0%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
            +  T  FS  +  Y+  V ++++QII   ++  +      NV  N+      L + FL 
Sbjct: 2   HQNSTTDFSLRRLFYNQEVRSVAIQIITLAVICYLVFSIGQNVLVNLAAIGKDLSMNFLW 61

Query: 66  ERAGFEID-QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
             AG++I  Q  V Y    ++  A LVG  NT  +A +G+I ATI+G  +G  RLS N L
Sbjct: 62  VPAGYDITFQPFVDYGPTDTHFRAALVGLSNTLLVAVTGIILATILGFTLGVMRLSNNFL 121

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V+ + +++++  RN+P L+ IFF+Y  ++++LP+P  +  +    ++ NRG+  P  T++
Sbjct: 122 VSKLSQIFIDFTRNVPVLLHIFFIYGVIINLLPVPKKAEAISGVFYMTNRGIFAPAPTLE 181

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +  V +F++ +       + +++   KTGK  PL +    LI  LP L  + +   +
Sbjct: 182 QGYEFVVGAFLIAVAGCFVLAKWAKNRQMKTGKIFPLFWTCLALIIALPVLTNMMIGGAI 241

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P L  FNF GG  + PE+++L+ ALS YTA+FIAEIVR G++A+ +GQ EAA ALG
Sbjct: 242 GVEVPKLKGFNFKGGLILRPEYVALWFALSYYTASFIAEIVRGGILAIHKGQKEAAHALG 301

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           ++  +  RLV++PQA+  IIPP+ S YLNL KNSSLA+A+G+ D+V+  GG  + QTG+ 
Sbjct: 302 ISPTRTLRLVIIPQALPLIIPPIASNYLNLTKNSSLAIAIGYFDIVATLGGISLMQTGKE 361

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E + + +  YL LS++I+  MN LN ++ALK +
Sbjct: 362 VETMSLVLLTYLCLSLIISGAMNYLNHRVALKAR 395


>gi|146278536|ref|YP_001168695.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556777|gb|ABP71390.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 420

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 166/422 (39%), Positives = 230/422 (54%), Gaps = 28/422 (6%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           + N        F     LYD R  ++++Q+ +  L      W V+N   N+E        
Sbjct: 1   MANVADAPKDTFRLSMLLYDTRYRSLTIQVFVFFLFMAGAAWLVDNTMRNLEALGKDFNF 60

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           GFL  RAG++I Q +V YT+DS++  A+LVG +NT  +A  G I AT+IG +VG  RLS 
Sbjct: 61  GFLWNRAGYDISQRLVEYTNDSTHGRAMLVGLLNTLLVALLGCIAATVIGVIVGVLRLSK 120

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR------- 174
           N LV  +  VYVE+FRN+P L+ I  +Y       P P+     P     +         
Sbjct: 121 NWLVGRLMTVYVEIFRNVPLLLWILLIYAVFTEATPAPNAFRPNPETGLADRSMFLDAIA 180

Query: 175 ------------------GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                              L      ++ +    + + VLG  L+      +     +TG
Sbjct: 181 VTNRYTAVPNPVFSRELGWLDLGLFYINIDVLAVLAAAVLGWWLNRMVKARATRIQNETG 240

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
                 + S  L+ GLP  VL+AL + L F  P L  FNF+GG  VS  FM+L++ALS Y
Sbjct: 241 VRPATWWSSVLLLLGLPVAVLLALGFHLEF--PELRGFNFVGGLNVSNSFMALWLALSLY 298

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T AFIAEIVR+G++A+ RGQ EAA ALGL   +   LV+LPQA+R IIPPL SQYLNL K
Sbjct: 299 TGAFIAEIVRAGILAISRGQSEAAFALGLRPGRTMSLVILPQALRVIIPPLISQYLNLTK 358

Query: 337 NSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           NSSLA+AVG+ DL    GG  +NQTG+ +E +L+ M IYL++S++I+  MN  NA + LK
Sbjct: 359 NSSLAIAVGYLDLRGTLGGITLNQTGRELECVLLMMLIYLAISLVISAVMNVYNAAVKLK 418

Query: 396 EK 397
           E+
Sbjct: 419 ER 420


>gi|254440396|ref|ZP_05053890.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198255842|gb|EDY80156.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 410

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 144/406 (35%), Positives = 218/406 (53%), Gaps = 18/406 (4%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F   + +YD R  +I++Q+I  +LL     W VNN   N+         GFL++ 
Sbjct: 7   PPKVGFQLSQLIYDTRYRSITIQVIATILLIAGIYWLVNNTIQNLAALGKDFDFGFLTQP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q +V Y+S S++  A  VG +NT  +AF G + AT++G   G  RLS N +V+ 
Sbjct: 67  AGYDINQRLVEYSSQSTHGRAAFVGILNTLLVAFLGCVLATVLGVTAGVLRLSNNWVVSR 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--- 184
           +  VYVE FRN+P L+ I  +   +   +       V      + N  ++     +    
Sbjct: 127 LMAVYVEGFRNVPLLLWIIAIMALMTEGMSRIREFRVGGDASMILNDSVAVTNRGVYIPG 186

Query: 185 ------------TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                        N  I +   V+ +++     + S    E TG      Y    ++   
Sbjct: 187 IILENGFLASSAMNWLILLVILVVSLIVIRGVRKRSDAVQEDTGVRPNTWYQQLAILIIP 246

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV++ +  +L +  P L  FNF  G  +    ++L++ALS YT AFIAEIVR+G++A+
Sbjct: 247 VGLVMVLMGAELQY--PELRGFNFSDGIHLRNSLIALWLALSLYTGAFIAEIVRAGILAI 304

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VS 351
            +GQ EAA ALGL   + T LV+LPQAMR IIPPL SQYLNL KNSSLA+AVG+ D+  +
Sbjct: 305 SKGQSEAAFALGLRPNRTTNLVILPQAMRVIIPPLISQYLNLTKNSSLAIAVGYMDVRST 364

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GG  INQTG+ +E +L+    YL +S+ I+  MN  N +  L+E+
Sbjct: 365 LGGITINQTGRELEGMLLLGAFYLLVSLAISGAMNVYNNRTQLQER 410


>gi|113475660|ref|YP_721721.1| polar amino acid ABC transporter inner membrane subunit
           [Trichodesmium erythraeum IMS101]
 gi|110166708|gb|ABG51248.1| polar amino acid ABC transporter, inner membrane subunit
           [Trichodesmium erythraeum IMS101]
          Length = 388

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 134/385 (34%), Positives = 212/385 (55%), Gaps = 4/385 (1%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            ++    D R   +++Q++  ++  V+    ++N+  N+ +     G  FL   A F I 
Sbjct: 7   QKIPLWRDDRFWRVALQVLAIIIFVVVVFIMISNLSRNLAQQGTRFGFSFLDNEAAFSIS 66

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++PY +   Y   +L G  N+  +   G+   TI+G + G    S N L+  + RVYV
Sbjct: 67  ESLIPYEASDPYIQVLLAGLFNSLRVMILGIFLTTILGIVAGIASFSENWLLRNLNRVYV 126

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV RN P L+ +FF Y +V   LP+P   + LP  +F++ RG++ P      N  +++  
Sbjct: 127 EVVRNTPLLLQLFFWYFAVFFNLPLPQEKLELPGPIFMSKRGIAIPWPENTVNVWLWLIV 186

Query: 194 FVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             LG + ++F  +  ++   EK     P L     +      +++ AL +Q         
Sbjct: 187 LFLGAIAAIFIWQWRNKLMTEKAASGQPQLIAIITIGIMELLIIIFALGWQAPIATETG- 245

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                GG  ++ E  +L + L  YT AFIAEIVRSG+ AVP+GQ EAA +LGL      R
Sbjct: 246 --GTKGGLNLTLEISALLVGLVFYTGAFIAEIVRSGIQAVPKGQWEAAKSLGLKPGLVMR 303

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           LV+ PQA+R +IP L SQY+NL KNSSLA+A+G+ DL +V  T  NQTG+ IE+ ++ M 
Sbjct: 304 LVIFPQALRVMIPSLNSQYMNLAKNSSLAIAIGYPDLYAVANTTYNQTGRPIEVFILIMV 363

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YLS++++I+L MN LN  + LKE+
Sbjct: 364 VYLSINLIISLSMNFLNKSVQLKER 388


>gi|209695503|ref|YP_002263432.1| general L-amino acid ABC transporter permease protein [Aliivibrio
           salmonicida LFI1238]
 gi|208009455|emb|CAQ79741.1| general L-amino acid ABC transporter permease protein [Aliivibrio
           salmonicida LFI1238]
          Length = 373

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 169/385 (43%), Positives = 226/385 (58%), Gaps = 16/385 (4%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
                LY+     I  Q++    L   F   VNN  +N+E                  I 
Sbjct: 4   KNKNILYNPTFRAILFQVLAITALGFFFYTIVNNALSNLESRG---------------IG 48

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             +V Y    SY    +VG +NT  ++  G++ ATI+G  VG  RLS+N LV+    VY+
Sbjct: 49  LSLVEYDETYSYGRTFIVGLLNTALVSVLGVLLATILGFTVGIARLSSNWLVSRCAAVYI 108

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E FRNIP L+ IFF Y +VL  LP P  S+ L   +FLN RGL FP+   +  + +   +
Sbjct: 109 ETFRNIPLLLQIFFWYFAVLPALPSPRQSLSLGESIFLNVRGLFFPSPIFEEGSNLIGMA 168

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            VL IV  +F +R + +    TG+  P++  S  L+  LPTL        +  + P L  
Sbjct: 169 VVLAIVFIIFLSRWAHNKQTLTGQQTPVVRYSILLLIALPTLAYFISGMPVSIEYPELKG 228

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           FNF GG ++ PE  +L +ALS YTA+FIAEIVRSG+ AV  GQ EAA+ALGL   K  +L
Sbjct: 229 FNFRGGISIIPELAALVVALSVYTASFIAEIVRSGINAVSYGQTEAAMALGLPRNKTLKL 288

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           V++PQAMR IIPPLTSQYLNL KNSSLA+A+G+ DLVSV  GT +NQTGQAIEII + M 
Sbjct: 289 VVIPQAMRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIITMTMG 348

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +YL+LS++ +  MN  N K+AL E+
Sbjct: 349 VYLTLSLLTSFVMNIYNNKVALVER 373


>gi|254452143|ref|ZP_05065580.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
 gi|198266549|gb|EDY90819.1| binding-protein-dependent transport systems inner membrane
           component [Octadecabacter antarcticus 238]
          Length = 410

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 147/406 (36%), Positives = 218/406 (53%), Gaps = 18/406 (4%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F   + +YD R  +I++Q+I  +LL     W VNN   N+         GFL++ 
Sbjct: 7   PPKASFRLSQLIYDTRYRSITIQVIATILLLAGIYWLVNNTIQNLAALGKDFDFGFLTQP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q +V YTS S++  A +VG +NT  +AF G + AT +G   G  RLS N +V+ 
Sbjct: 67  AGYDINQRLVEYTSQSTHGMAAVVGILNTLLVAFLGCLLATFLGVTAGVLRLSNNWVVSR 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--- 184
           +  VYVE FRN+P L+ I  +   +   +       V      + N  ++     +    
Sbjct: 127 LMAVYVEGFRNVPLLLWIIAIMALMTEGMSRIREFRVGGDAGMILNDSVAVTNRGVYIPG 186

Query: 185 ------------TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                        N  I +   V+ + +     R +    E TG      Y    ++   
Sbjct: 187 IILENGFLASSAMNWLILLVILVISLFVIRGIRRRANAVQEDTGVRPTTWYQQLSILIVP 246

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV+I +  +L +  P L  FNF  G  +    ++L++ALS YT AFIAEIVR+G++A+
Sbjct: 247 VGLVMILMGAELQY--PELRGFNFSDGIHLRNSLIALWLALSLYTGAFIAEIVRAGILAI 304

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VS 351
            +GQ EAA ALGL   + T LV+LPQAMR IIPPL SQYLNL KNSSLA+AVG+ D+  +
Sbjct: 305 SKGQSEAAFALGLRPNRTTSLVILPQAMRVIIPPLISQYLNLTKNSSLAIAVGYMDVRST 364

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GG  INQTG+ +E +L+    YL LS++I+  MN  N +  L+E+
Sbjct: 365 LGGITINQTGRELEGMLLLGAFYLVLSLVISGAMNVYNNRTQLQER 410


>gi|166365943|ref|YP_001658216.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166088316|dbj|BAG03024.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 378

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 141/387 (36%), Positives = 220/387 (56%), Gaps = 16/387 (4%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL---SERAGF 70
            +  F YD R   I +Q+I+ L++ +IF +   N+  N ++  LS G GFL      A F
Sbjct: 5   QKNSFWYDERFQKIFLQVIILLIVCLIFWFFGRNLVINFQRLRLSFGFGFLFDPDRPASF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    + Y+   +Y  A+LVG +N+  +  SG+  A  +G ++G GRLS N L+  +  
Sbjct: 65  AIGDSPIAYSPTDTYFRALLVGLLNSLRIMISGIFLAISLGIVIGLGRLSDNWLIRQLAT 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +YVE  RN P L+ +FF Y +V   LP  + S+     +FLNN G+  P         + 
Sbjct: 125 IYVETIRNTPLLLQLFFWYFAVFLKLPKIEESLEFFGSVFLNNSGVYLPFPANSFRTWLA 184

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   +LGI+LS+F    ++     T   + ++    +            L++Q     P+
Sbjct: 185 LAIMILGIILSVFLYLKNKLSLCLTSLLILVIIPLIW-----------GLQWQSPQVNPL 233

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               +F  G  +S EF +L I L+ YTAAFIAE VR G+ +V RGQ EAA ALGL     
Sbjct: 234 NQNIDF--GLHLSSEFATLLIGLTVYTAAFIAETVRGGIQSVNRGQWEAAKALGLKPLLV 291

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+ PQA+  IIPPLT++ LNL+KNSSLA+A+G+ D+ ++  TI NQTG+A+E++++ 
Sbjct: 292 MRLVIFPQALPVIIPPLTNECLNLVKNSSLAIAIGYNDIYAISSTIANQTGKAVEMLIVV 351

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M  YL  +++I+L MN+LN ++ ++E+
Sbjct: 352 MATYLFFNLVISLTMNQLNKRVKIQER 378


>gi|163745576|ref|ZP_02152936.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Oceanibulbus indolifex HEL-45]
 gi|161382394|gb|EDQ06803.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Oceanibulbus indolifex HEL-45]
          Length = 389

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 146/388 (37%), Positives = 217/388 (55%), Gaps = 8/388 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L D R  +I+ Q+I  +LL     +  +N+  N+  + L++   FL   AG++I+Q ++
Sbjct: 2   LLSDTRYRSITFQVIALVLLVTAIWYLGSNLAANLRAAGLNISFQFLGNPAGYDINQTLI 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PYTS SS   A  VG +NT  ++F   + AT+ G + G  RLS N LV  +   YVE+FR
Sbjct: 62  PYTSQSSNLQAAWVGIINTLLVSFLACLTATLFGVVAGVLRLSNNWLVRKLMAGYVEIFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI------VLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           NIP L+ I  +Y  + + +P P           +  G F       +    +     +FV
Sbjct: 122 NIPVLIWILIIYTIMTAAMPAPSAFRGDDPASSMMLGSFAFTNRGVYIPGPVWGAGSMFV 181

Query: 192 FSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            +  +  ++ +FA  R +      TG+ LP+L+ S  ++     +V   +   +  D P 
Sbjct: 182 VATFIASIIGVFAYRRYATKLLYDTGRLLPMLWPSVAILLLPTIVVFFIMGMPIGLDYPA 241

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ AV RGQ EAA ALGL   + 
Sbjct: 242 LKGFNFQGGIQIGAPLIALWFALSIYTGAFIAENVRAGIQAVSRGQSEAAAALGLRPGRV 301

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILI 369
             LV+LPQA+R IIPPL S YLN+ KNSSLA+ VG+AD+ +  GG  +NQTG+AIE +++
Sbjct: 302 MNLVVLPQALRVIIPPLISNYLNITKNSSLAILVGYADITATLGGITLNQTGRAIECVVL 361

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M  YL +S+ I++ MN  N    LKE+
Sbjct: 362 LMLFYLVISLGISMVMNVYNNATKLKER 389


>gi|148255315|ref|YP_001239900.1| putative amino acid transport protein, permease [Bradyrhizobium sp.
           BTAi1]
 gi|146407488|gb|ABQ35994.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 383

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 153/372 (41%), Positives = 233/372 (62%), Gaps = 1/372 (0%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
           + + +QI+   +L  +    V N  +N+    ++ G GFL+  AGF+++Q ++ Y+   S
Sbjct: 9   NGVILQILFVAVLVWVGYEIVANARSNLAAQRITSGFGFLNNTAGFDVNQALISYSGSDS 68

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  +LVG +NT  ++  G++ +TI+G LV  GRLS N L++ +   YVE+ RN+P L  
Sbjct: 69  YSRVLLVGILNTLLVSVIGIVLSTILGFLVALGRLSPNVLLSRVSGAYVELIRNLPLLFQ 128

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I F Y +VLS LP P  SI L    FLNNRG   P    +     F+ +    IV+SL  
Sbjct: 129 ILFWYLAVLSALPGPRQSISLFSTFFLNNRGFIVPRPIEEPGLTPFLIALGAAIVVSLGL 188

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
              +R      G A+ +      L+ GLP + ++     + F+ PVL  FNF GGS + P
Sbjct: 189 RYYARRELFVRGHAMRIWPYVLGLLVGLPLMAMLMFGVPVAFEVPVLKGFNFAGGSRIIP 248

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E ++L +AL+ YTA+FIAE+VR G+++V +GQMEA ++LGL+     RL+++PQA+R I+
Sbjct: 249 ELVALTVALTMYTASFIAEVVRGGILSVHKGQMEAGLSLGLSRGTVLRLIVVPQALRVIL 308

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           PPLT+QYLNL KNSSLAVA+G+ DLVSV  GT ++QTGQAIEII I M +YL++S++ + 
Sbjct: 309 PPLTNQYLNLTKNSSLAVAIGYPDLVSVFAGTTMSQTGQAIEIIAITMGVYLAISLITSA 368

Query: 384 FMNRLNAKIALK 395
            M+  + ++  +
Sbjct: 369 MMSFYSWRLGKR 380


>gi|89053119|ref|YP_508570.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88862668|gb|ABD53545.1| L-aspartate ABC transporter membrane protein / L-asparagine ABC
           transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Jannaschia sp. CCS1]
          Length = 429

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 146/425 (34%), Positives = 223/425 (52%), Gaps = 37/425 (8%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F   + +YD R  ++++Q++  +L+ +   +   N   N+         GFL  R
Sbjct: 7   PPREAFRLSQLIYDTRYRSMTIQVVAFILIMLGLWYLGRNAIQNLSDLGKDFDFGFLGNR 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++I+Q ++ Y++DS++  A +VG +NT  +AF G I ATI+G   G  RLS N +V  
Sbjct: 67  AGYDINQRLIEYSNDSTHGRAAIVGILNTLLVAFLGCITATILGVAAGVLRLSNNWIVGR 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI---------------VLPFGMFLN 172
           +  VYVE FRNIP L+ I  ++  +   +P P                   V   G+++ 
Sbjct: 127 LMTVYVEGFRNIPLLLWIIVIFAIMTEAMPQPRDFRGDNPEASMSLGGSVAVTNRGVYIP 186

Query: 173 NRGLSFP------------------TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           N   +                          +  +F+   + G++ S    R ++   E 
Sbjct: 187 NVVFTRSLGGNEMSDAADGVPAAIIPAASFGDWALFLAVLIAGVLGSGAIARWAKAKQEA 246

Query: 215 TGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           TG   P L ++    I     +VLIAL   L  D P L  FNF GG  +    ++L+ AL
Sbjct: 247 TGVRPPGLFWMRAAAIVVPAAIVLIALGATL--DYPELRGFNFSGGIHLRNALIALWFAL 304

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S YT AFIAEIVR+G+++V +GQ EA+ ALG+       LV+LPQA+R IIPPL SQ+LN
Sbjct: 305 SLYTGAFIAEIVRAGILSVSKGQTEASSALGMRASWTMNLVVLPQALRVIIPPLISQFLN 364

Query: 334 LLKNSSLAVAVGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L KNSSLA+AVG+ D+  ++GG  INQTG+ +E +L+    YL  S++I+  MN  N  +
Sbjct: 365 LTKNSSLALAVGYMDVRSTLGGITINQTGRELEGMLLLGAFYLITSLLISAVMNVYNNSV 424

Query: 393 ALKEK 397
            L+E+
Sbjct: 425 KLQER 429


>gi|224371699|ref|YP_002605863.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
 gi|223694416|gb|ACN17699.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
          Length = 386

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 148/371 (39%), Positives = 226/371 (60%)

Query: 27  ISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYA 86
           + +Q  +  ++       + N   N+E  N++ G GFLS  +G  I   ++PYT   SY 
Sbjct: 16  VVLQAAVLGIIFYAAHGLLVNTQANLEARNIASGFGFLSLESGMPISNSLLPYTPADSYG 75

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A L+G +NT ++AF G++ ATI+G L+G  R+S+N L++ +  +YVEV RNIP L+++F
Sbjct: 76  YAFLMGILNTLYVAFMGIVLATIMGILIGVARVSSNWLISKLAEIYVEVLRNIPLLLILF 135

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F Y   L+ LP P  S++   G FLNNRG+  P    +        +F+ GI++++   R
Sbjct: 136 FTYSIALAALPSPQKSLIPFSGFFLNNRGIYLPRPMPEPGFWFVGMAFLAGILVAVLINR 195

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
                H +TG+ +P  ++    +  LPT+        L ++  VL  FNF GG  + PEF
Sbjct: 196 YGAKRHRETGRIIPSFFLGMIAVVTLPTIAWFLASTPLSWEFAVLRGFNFKGGLVIRPEF 255

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L   L  YTAAFI E VRSG+ +V  GQ+ ++ ALGL      R V+LPQA+R IIP 
Sbjct: 256 SALMTGLVLYTAAFIGENVRSGIQSVNIGQINSSKALGLPPGLTMRKVILPQALRVIIPA 315

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            T+ Y +L+KNSSLAVA+G+ D+VS+GGTII Q  QAIE+I IWM +Y+++++++++ MN
Sbjct: 316 TTNDYTSLVKNSSLAVAIGYPDMVSIGGTIIGQNDQAIEVIAIWMGVYMTINLIVSMIMN 375

Query: 387 RLNAKIALKEK 397
            LN K+ L  +
Sbjct: 376 WLNGKVQLIGR 386


>gi|114771236|ref|ZP_01448656.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [alpha proteobacterium HTCC2255]
 gi|114548161|gb|EAU51048.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [alpha proteobacterium HTCC2255]
          Length = 420

 Score =  272 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 141/422 (33%), Positives = 222/422 (52%), Gaps = 28/422 (6%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           +        + F   + LYD R  ++++QI+  + + + F W ++N   N+      +  
Sbjct: 1   MTAIPDPSKQGFKFSQLLYDTRYRSMTIQIVSLIAILLFFGWLISNTAANLATLGKPIQF 60

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FL E + ++I+Q ++ YTS  ++  A L+G +NT  LA  G + ATI+G  +G  RLS 
Sbjct: 61  KFLGEPSNYDINQRLLDYTSRDTHLRAGLMGLINTLVLALMGCVTATILGVAIGVLRLSK 120

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV------LPFGMFLNNRG 175
           N LVA +  +Y+E+FRNIP L+ I  ++  ++  +P P+          L   + + NRG
Sbjct: 121 NWLVARVMTLYIELFRNIPVLLWIIIVFSIMIETMPRPNQFRSGEAAMKLFDSVAITNRG 180

Query: 176 LSFPTLTMD-------------------TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           +  P    +                    +    +    +G+ +S      +     +TG
Sbjct: 181 VYIPEPLFNGGLGDIFLLGESSLRFGLSLDLIAILIVLFVGLFISKKIKTNADFIQNETG 240

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
                 +    ++     + L AL +  H   P L  FNF GG  +    ++L+IALS Y
Sbjct: 241 VRPTTWWKRLSIVILPIVITLWALGF--HLGYPELKGFNFKGGIYLRNSLIALWIALSLY 298

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAAFIAE VRSG+ AV +GQ EAA ALG++  +   L++LPQA+R IIPP+ SQ+LNL K
Sbjct: 299 TAAFIAENVRSGIQAVAKGQSEAAYALGISPGRTMSLIILPQALRIIIPPVISQFLNLTK 358

Query: 337 NSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           NSSLA+AVG+ DL     G  +NQTG+ +E +L+ M IYL +S+ I+  MN  N  + L 
Sbjct: 359 NSSLAIAVGYMDLTGTLMGITLNQTGRELETVLMGMAIYLIISLAISTVMNWYNNSVKLV 418

Query: 396 EK 397
           E+
Sbjct: 419 ER 420


>gi|114766875|ref|ZP_01445797.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Pelagibaca bermudensis HTCC2601]
 gi|114540921|gb|EAU43981.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. HTCC2601]
          Length = 410

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 143/404 (35%), Positives = 217/404 (53%), Gaps = 14/404 (3%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
              + F   + +YD R  ++++Q++  ++L ++F W V+N  +N++        GFL++ 
Sbjct: 7   PPGQGFRLSQLIYDTRYRSLTIQVVAMIVLMLLFSWLVSNTIHNLQTLGKDFDFGFLTQP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +G++I+Q ++ Y S S++  A +VG +NT  +A  G   AT++G + G  RLS N LV+ 
Sbjct: 67  SGYDINQRLIEYDSQSTHGRAAIVGILNTLLVAVLGCALATVLGVIAGVLRLSNNWLVSR 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  VYVE FRN+P L+ I  ++  +    P P           +    ++     +   A
Sbjct: 127 LMAVYVEGFRNVPLLLWIVLIFALMTESTPAPRAFRGDTPDASMLFDAVAITNRGVYVPA 186

Query: 188 KIFVFSFVLGIVLSLF---------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-- 236
             F   F     L+              + R  H  T K        T     L  L+  
Sbjct: 187 IHFASPFFTNGALNWLVVLVVLGASIFAIQRLRHWATAKQEATGDRPTTWYLILGILILP 246

Query: 237 --LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             L+ L      D P L  FNF GG  +    ++L++ALS YT AFIAEIVR G++AV +
Sbjct: 247 TGLLMLLMGAFLDMPSLQGFNFGGGIHLRNSLIALWLALSLYTGAFIAEIVRGGILAVNK 306

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VSVG 353
           GQ EAA ALG+       LV+LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D+  ++G
Sbjct: 307 GQTEAAYALGIRPSTTMNLVILPQALRVIIPPLISQFLNLTKNSSLAIAVGYMDVRSTLG 366

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  INQTG+ +E +L+    YL LS++I+  MN  NA + LKE+
Sbjct: 367 GITINQTGRELEGMLLLGLFYLVLSLLISGVMNVYNASVKLKER 410


>gi|149908407|ref|ZP_01897070.1| general L-amino acid transport system permease protein AapQ
           [Moritella sp. PE36]
 gi|149808570|gb|EDM68505.1| general L-amino acid transport system permease protein AapQ
           [Moritella sp. PE36]
          Length = 352

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 146/352 (41%), Positives = 224/352 (63%), Gaps = 2/352 (0%)

Query: 48  VYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS-SYATAILVGFVNTFWLAFSGMIP 106
           +++N+ K  ++ G  FL E AGF I Q ++ Y   S ++    +VG +NT  +   G+I 
Sbjct: 1   MFDNVAKRGITTGFSFLGETAGFGISQSLIHYDDTSSTFLDVFIVGLLNTMLVGVIGIIL 60

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           A+ +G L+G GRLS N L++ +  VY+E FRNIP L+ I F Y  VL+ LP P  S+   
Sbjct: 61  ASGLGLLIGIGRLSPNYLISKLSLVYIETFRNIPILLQILFWYNVVLAALPSPRQSLSYF 120

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +F+NNRGL  P    ++ +   + +FV+  +  ++ ++ +   H+ TG+  P++ +S 
Sbjct: 121 DSIFINNRGLIIPDPIFESGSFSILVAFVIACISVVYLSKWANKRHDLTGEEFPVIRVSI 180

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G P L+       +  + P L  FNF GG T+ PE ++L  ALS YTA +IAE VR
Sbjct: 181 GMLIGAPLLMFFLAGQPISAEYPALKGFNFKGGITIIPELLALIFALSIYTATYIAEAVR 240

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP+GQ EAA +LGL      R V+LPQA+R IIPP+ +QYLNL+KNSSLA A+G+
Sbjct: 241 AGIEAVPQGQKEAAKSLGLKEHVILRKVILPQALRVIIPPVINQYLNLVKNSSLATAIGY 300

Query: 347 ADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++V++  GT +NQ GQAIEIIL+ M +YL  SI+I+L +N +NA++ +K +
Sbjct: 301 PEIVTLFSGTTLNQVGQAIEIILMTMAVYLVFSIVISLLLNWVNARMEIKGR 352


>gi|299133836|ref|ZP_07027030.1| polar amino acid ABC transporter, inner membrane subunit [Afipia
           sp. 1NLS2]
 gi|298591672|gb|EFI51873.1| polar amino acid ABC transporter, inner membrane subunit [Afipia
           sp. 1NLS2]
          Length = 401

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 166/400 (41%), Positives = 235/400 (58%), Gaps = 3/400 (0%)

Query: 1   MIKNARKTVTRYFSRMK--FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
           M    R+   R  + +            I+ Q+  A LL  +    V N  +N+   +++
Sbjct: 1   MATAPRRPPFRPLAHLARALSGGTGWKGIAGQLAFAGLLAWLAFDIVTNAQDNLRAQHIA 60

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
            G GFLS  AGF ++Q ++ Y+   +Y     VG +NT  ++  G++ AT+IG  V  GR
Sbjct: 61  SGFGFLSGTAGFSVNQALIRYSEADTYLRVFEVGLLNTLLVSIIGIVFATLIGFAVALGR 120

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           LS N L+A +   YVE+ RN+P L  + F Y +VL+ LP P  S+ +    FLNNRG   
Sbjct: 121 LSPNWLLARLSGGYVEIIRNLPLLFQLLFWYLAVLAALPNPRQSLSIFGVAFLNNRGFVV 180

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P +  +  A +F  + +  I  SL  T  +R    + G  L +   +  L+ GLP L + 
Sbjct: 181 PHVVPEQGAGVFAVAILAAIAASLLMTVYARRRLYRFGDRLRVWPFALALLVGLPLLSIA 240

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                  FD PVL  FNF GG+ V+PEF++L IALS YTAAFIAEIVR GL+AVP+GQME
Sbjct: 241 LFGAPASFDLPVLRGFNFAGGTRVTPEFVALTIALSTYTAAFIAEIVRGGLLAVPKGQME 300

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTII 357
           A  +LGL+     RLV++PQAMR I+PPLT+QYLNL KNSSLAVA+G+ DL SV  GT +
Sbjct: 301 AGASLGLSRPAILRLVIIPQAMRLILPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTL 360

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +QTGQA+EII + M +YL++S++ +  MN     I   ++
Sbjct: 361 SQTGQAVEIIAMTMAVYLAISLITSALMNLYGWHIDRSQR 400


>gi|182678576|ref|YP_001832722.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634459|gb|ACB95233.1| binding-protein-dependent transport systems inner membrane
           component [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 391

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 160/392 (40%), Positives = 231/392 (58%), Gaps = 7/392 (1%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
           ++ T   + +    D R     VQ +  L L ++ +     ++ NM    +     F ++
Sbjct: 6   QSATDRATLLAVWRDPRKRGFIVQALFVLALCLVLVGMFTTLHANMVARGIPTDFSFWNQ 65

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF+I+Q  + Y+  S+Y  A LVG +NT  +A  G++  TIIG +VG  RLS N+LV+
Sbjct: 66  TAGFDINQTPIAYSPLSTYGRAFLVGLINTLIVASIGLVCTTIIGVIVGISRLSKNRLVS 125

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           ++   YVE  RNIP L+ + F Y ++L  LP P  S++ PFG  LNNRGL  P  ++   
Sbjct: 126 FLAATYVETLRNIPLLLQLLFWYNAILKPLPGPRQSLLFPFGTVLNNRGLFLPLPSLLPG 185

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A     +  LG+  S    R             P   +   L  G   +  + L   L F
Sbjct: 186 AAWVGAALALGLAASFLVGR-----GTALKPGWPKTLLCLVLALGPAIIAAM-LAPPLAF 239

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D+P+L  FN+ GG  V PE ++L + LS YTAAFIAEI+R+G++AVPRGQ EAA ALGL 
Sbjct: 240 DRPILKGFNYTGGFRVLPELVALLLGLSLYTAAFIAEIIRAGIMAVPRGQSEAAEALGLP 299

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
                R ++LPQA+R +IPPLTSQYLNL+KNSSLAV +G+ DLV V  GT++NQTG A++
Sbjct: 300 SGLTMRRIILPQALRVVIPPLTSQYLNLIKNSSLAVFIGYPDLVQVFAGTVLNQTGAAVQ 359

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II I M +YL++S++ +  MN +N ++AL E+
Sbjct: 360 IIFITMAVYLAVSLVTSFAMNLINRRMALVER 391


>gi|163739482|ref|ZP_02146892.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Phaeobacter gallaeciensis BS107]
 gi|161387235|gb|EDQ11594.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Phaeobacter gallaeciensis BS107]
          Length = 410

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 146/404 (36%), Positives = 220/404 (54%), Gaps = 14/404 (3%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     + D R  +++ Q I AL+L +   +  NN+  N+  + L++  GFL + 
Sbjct: 7   PPKAQFQLSMLVNDTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYGFLGDP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +G++I+Q ++ Y S SS+A A +VG +NT  +A    I ATI G + G  RLS N LV+ 
Sbjct: 67  SGYDINQRLIEYDSQSSHARAAVVGVLNTLLVAVLACITATIFGVVAGVLRLSNNWLVSK 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  VYVE+FRNIP L+ I  ++  + +V+P P           +     +F    +    
Sbjct: 127 LMAVYVEIFRNIPVLIWIIIIFTIMTAVMPGPREFRGDNATSSMLFDLFAFTNRGVYIPM 186

Query: 188 KIFVFSF-----------VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-- 234
             F   F           +  +V S    R       KT +   +   +  +  G+    
Sbjct: 187 PWFESGFFASGALNWLVVIAALVGSFLVMRRIEANATKTQEKTGVRPKTKLIALGVWLVP 246

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+     L ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +
Sbjct: 247 LALVLFVMGLSWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINK 306

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-G 353
           GQ EAA ALGL   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ +  G
Sbjct: 307 GQTEAAAALGLRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLG 366

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +NQTG+AIE +L+ M  YL+ S++I++ MN  NA + LKE+
Sbjct: 367 GITLNQTGRAIECVLLLMLFYLTASLLISMVMNVYNASVKLKER 410


>gi|83950492|ref|ZP_00959225.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
 gi|83838391|gb|EAP77687.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
          Length = 407

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 148/408 (36%), Positives = 221/408 (54%), Gaps = 30/408 (7%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            +YD R  + ++Q +  L   +   W ++N   N++     +  GFL E A ++I+Q ++
Sbjct: 2   LIYDTRYRSFTIQAVALLGFMLFGAWLISNTITNLQTLGKPVQFGFLLEPAQYDINQRLL 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y +  ++  A  +G  NT  +AF G I ATI+G  VG  RLS N LVA I  VYVEVFR
Sbjct: 62  DYNNRDTHLRAAFIGLTNTLLVAFLGCIAATILGVFVGVLRLSKNWLVAKIMAVYVEVFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHS--------IVLPFGMFLNNRGLSFPTL-------- 181
           N+P L+ I      ++  LP P           +     + + NRG+  P          
Sbjct: 122 NVPVLLWIVLAMAVLIESLPSPKDFRGDNATASMSFFDSVAVTNRGVYIPEPLFSRSLGD 181

Query: 182 -------TMDTNAKIFVFSFVLGIVLSLFA----TRLSRHFHEKTGKALPLLYISTFLIF 230
                   +  +  + + + VL I+ S+FA       +      TG      +++  + F
Sbjct: 182 VHLLGDSPLRMDLSLDLLAIVLVIIASIFAIKKVNARATAIQNSTGLRPTTWHVNLGIFF 241

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               ++LIAL +  H   P L  FNF GG+ +     +L++ALS YTAAFIAEIVR+G++
Sbjct: 242 VPLIVLLIALGF--HLGYPELKGFNFQGGTHLRNSLTALWLALSLYTAAFIAEIVRAGIL 299

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQ EAA ALGL  ++   LV+LPQA+R IIPPL S YLNL KNSSLA+AVG+ D+ 
Sbjct: 300 AISHGQTEAAGALGLRPKRIMSLVVLPQALRVIIPPLISNYLNLTKNSSLAIAVGYMDIT 359

Query: 351 SV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              GG  +NQTG+ +E +L+ M  YL +S+ I+  MN  N+++ L E+
Sbjct: 360 GTLGGITMNQTGRELESVLMLMLAYLIISLSISAVMNWYNSRVKLVER 407


>gi|153821327|ref|ZP_01973994.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|126521145|gb|EAZ78368.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
          Length = 332

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 123/327 (37%), Positives = 180/327 (55%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIG 62
           K   +T   +      LY+    ++  Q++   +L       VNN   N+E   ++ G  
Sbjct: 6   KATPETSDAHSKHTNLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFA 65

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FL + AGF I Q ++PY    SY    LVG +NT  ++  G++ ATI+G L+G  RLS+N
Sbjct: 66  FLEQTAGFGISQSLIPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSN 125

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L++ +  VY+E FRN+P L+ IFF Y  VL  LP    S+ L    +LN +GL      
Sbjct: 126 WLISRLAAVYIETFRNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPI 185

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            ++ +   + + + GI+     +  + +    TG+  P+      L    P LV   L  
Sbjct: 186 FESGSIWVLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQ 245

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  + PVL  FNF GG +V PE  +L +AL+ YTA+FIAEIVRSG+ AV  GQ EAA++
Sbjct: 246 PITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMS 305

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTS 329
           LGLT  K  +LV++PQA+R IIPPLTS
Sbjct: 306 LGLTRTKTLKLVIIPQALRIIIPPLTS 332


>gi|172037185|ref|YP_001803686.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine
           [Cyanothece sp. ATCC 51142]
 gi|171698639|gb|ACB51620.1| amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           [Cyanothece sp. ATCC 51142]
          Length = 395

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 146/387 (37%), Positives = 218/387 (56%), Gaps = 4/387 (1%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER---AGF 70
            ++ F  D R+  + +Q++   ++ ++F+   NN+  N  +  L+ G GF+ +    + F
Sbjct: 10  GKIPFWRDSRIIKVIIQLLTISIIILVFILLGNNLSQNFRQLGLTFGFGFIFDPDLNSRF 69

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    +PY     Y  AILVG +N+  +  +G+I A ++G ++G GRLS N LV  I  
Sbjct: 70  NIGDSPIPYQPTDPYYRAILVGLLNSLRVMITGIILAFLLGVIIGLGRLSDNWLVQKIAT 129

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +YVE  RN P L+ +FF Y +V    P  D  +VL   +FL+N+G+  P L  +    + 
Sbjct: 130 IYVETIRNTPLLLQLFFWYFAVFLKFPKIDAPLVLFNSIFLSNQGVYLPFLLRNLQTFLA 189

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   +LG + +    R       + G    +  I    I  L  L+ +       F    
Sbjct: 190 ILILLLGGITAFLIWRKKTKVIIQQGTTGKVYNIGLITILILSFLI-VFFGLDWQFPNYD 248

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                   G  +SPEF +L   L+ YTAAFIAE+VRSG+ +V +GQ EAA ALGL    A
Sbjct: 249 SQVQRIQNGLNLSPEFATLLTGLTIYTAAFIAEVVRSGIQSVSKGQWEAAKALGLNSGLA 308

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+ PQA+R +IPPLTS++LNL KNSSLAVA+G+ D+ +V  TI NQTG++IE++LI 
Sbjct: 309 MRLVIFPQALRVMIPPLTSEFLNLAKNSSLAVAIGYNDIYAVSNTISNQTGKSIEMLLIV 368

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M  YL  +++I+  MNRLN  + LKEK
Sbjct: 369 MVTYLIFNLIISSGMNRLNRFVQLKEK 395


>gi|254512406|ref|ZP_05124473.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacteraceae bacterium KLH11]
 gi|221536117|gb|EEE39105.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacteraceae bacterium KLH11]
          Length = 410

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 152/406 (37%), Positives = 225/406 (55%), Gaps = 18/406 (4%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     + D R  +++ Q+I A+ + +   +  NN+  N+  + L++   FL E 
Sbjct: 7   PPKADFRLSMLINDTRYRSLTFQVIAAIAIALSIWYLGNNLIQNLRAAGLNISYAFLGET 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG++++Q +V Y S SS+  A LVG +NT  +AF   I AT+ G + G  RLS N LV+ 
Sbjct: 67  AGYDVNQRLVEYNSQSSHGRAALVGLLNTLLVAFLACITATVFGVIAGVLRLSNNWLVSK 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  VYVE+FRNIP L+ I  ++  + +VLP P+          +     +F    +    
Sbjct: 127 LMAVYVEIFRNIPVLIWIIIIFTIMTAVLPAPNAFRGENPSSSMLFDAFAFTNRGVYLPK 186

Query: 188 KIFV-----------FSFVLGIVLSLFATR----LSRHFHEKTGKALPLLYISTFLIFGL 232
             F               +  +V S FATR     +    E+TG       ++  +    
Sbjct: 187 PEFANGLFGSTALNWLLVIAALVGSWFATREIGKKATKKQEETGDRPNTTLLTLAVWIVP 246

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
              VL+ +   L ++ P L +FNF GG  V    ++L+ ALS YT AFIAE VR+G+ A+
Sbjct: 247 F--VLLMIIMGLTWNVPELKRFNFSGGLNVGGPLIALWFALSIYTGAFIAENVRAGIQAI 304

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ALGL   +   LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+AD+ + 
Sbjct: 305 SKGQTEAAGALGLRSGRIMNLVVLPQALRVIIPPLISQYLNITKNSSLAIAVGYADITAT 364

Query: 353 -GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            GGT +NQTG+AIE +L+ M  YL+ S+ I++ MN  NA + LKE+
Sbjct: 365 LGGTTLNQTGRAIECVLLLMLFYLTASLTISMVMNVYNASVKLKER 410


>gi|317122274|ref|YP_004102277.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315592254|gb|ADU51550.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 392

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 146/376 (38%), Positives = 215/376 (57%), Gaps = 1/376 (0%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           D+R+  + +Q ++ + +    ++ + NV  N+++  ++ G  FL   A F I +  + Y 
Sbjct: 15  DVRLRRLLIQGVVLVAVAAAAVYLIGNVQRNLQQLGITPGFDFLRHPASFAIGETSIAYR 74

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +   Y  A L G VNT  ++  G++ AT++G   G  RLS N LV  +  +YVEV RN P
Sbjct: 75  ASDPYGRAFLAGLVNTLRVSVLGVVLATVVGVTAGLARLSGNGLVRLLASLYVEVTRNTP 134

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+ +FF Y +++  LP    +I LP  +FL NRGL  P           +   +   V 
Sbjct: 135 LLLQLFFWYGAIVYTLPPAAQAITLPGSVFLMNRGLVMPAPKPGPGFGPALAIVLTAAVA 194

Query: 201 SLFATRLSRHFHEKTGK-ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           ++ A R       + G+   P L  +  L  G+     +     L  D+PVL +FNF GG
Sbjct: 195 AMVAYRRLLRRRVEEGRETRPGLVAAVLLAAGVLAAGFLPPGPPLVLDRPVLARFNFQGG 254

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             +S EF +L +AL  YT AFIAE+VR G++AVPRGQ EAA +LGL      RLV+ PQA
Sbjct: 255 LMLSAEFTALLLALVIYTGAFIAEVVRGGVLAVPRGQWEAAASLGLPPLLVQRLVVFPQA 314

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R IIPPLTSQYLNL+KNSSLA+AV F DL++V  TI+NQTG+ +E++L+    YL+ S+
Sbjct: 315 LRIIIPPLTSQYLNLIKNSSLAMAVAFPDLLNVSSTIVNQTGRTLEVLLMVGGTYLAFSL 374

Query: 380 MIALFMNRLNAKIALK 395
           + +L MN  N  +   
Sbjct: 375 LTSLLMNLYNRSLRRG 390


>gi|326204745|ref|ZP_08194600.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
 gi|325985116|gb|EGD45957.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
          Length = 389

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 141/383 (36%), Positives = 223/383 (58%), Gaps = 1/383 (0%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
                + +V  I +Q +  ++L ++ ++ ++N    ++K  + LG  FL+  AGF ID  
Sbjct: 7   TPLWNNKKVIPIILQAVFLIVLILLSVFFISNASKGLQKIGIKLGFDFLNSTAGFSIDDR 66

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ YT   SY  A+LVG  NT  +   G++ + I+G  +G GRLS N LV  +   YVEV
Sbjct: 67  LINYTPSDSYGRALLVGLFNTLKVGLVGIVISGILGLFIGIGRLSNNWLVKKLTGGYVEV 126

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN P L+ IF LY +V    P  + +I     +F +NRG + P  T + ++ I++   +
Sbjct: 127 IRNTPLLIQIFILYFAVFLPFPQIERNINFKNIIFFSNRGTAIPWFTTNQSSGIWLIFAM 186

Query: 196 LGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +G+  ++   ++      + GK + P+ +    ++  +    ++     L    P + + 
Sbjct: 187 IGLAAAIVLWKVVLKKQVEIGKNMHPMAWSIGAVLITVIVAYVVTNSPPLQISIPEINKM 246

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            F GG  +S EF S+   L  Y +AFIAEIVR+G++AVP+GQ+EA  ALG+      RLV
Sbjct: 247 AFRGGYVLSSEFASILCGLFIYHSAFIAEIVRAGIMAVPKGQIEATKALGMKKGATMRLV 306

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R IIP +TSQ+LNL KNS+LA+AVG+ DL S+G TIINQTGQ+I+I+++   IY
Sbjct: 307 ILPQAFRVIIPSVTSQFLNLFKNSTLAIAVGYTDLFSIGNTIINQTGQSIQIMILMASIY 366

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L +S++I+  MN  N    L E+
Sbjct: 367 LIVSLVISFLMNCFNNYYKLVER 389


>gi|27378023|ref|NP_769552.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27351169|dbj|BAC48177.1| blr2912 [Bradyrhizobium japonicum USDA 110]
          Length = 395

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 152/373 (40%), Positives = 219/373 (58%), Gaps = 1/373 (0%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
             +  Q+++  +   +  +  +N   N+    ++ G  FL   AG  I   ++ Y    +
Sbjct: 24  KGLFWQVLVVGIAVGVIAFLWSNTVTNLSARRITTGFAFLGREAGMPIADSLLAYNPRDT 83

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A +VG VNT  +A  G++ ATI+GTL+G  RLSAN L++ +  VYVE  R+IP L+ 
Sbjct: 84  YLWAFVVGIVNTLRVAVIGIVLATILGTLIGISRLSANWLLSRLAAVYVETLRDIPLLLQ 143

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           + F Y  ++  LP    +     G+FL+NRGL  P + +       + +  LG  +    
Sbjct: 144 LLFWY-VLMQGLPAARAAFRPLEGVFLSNRGLILPAIPIGAPQLWVLGTAALGCAVFYVF 202

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            R       + GK       +  LI  LP  V + L      + P L  FNF+GG T++P
Sbjct: 203 RRWQIAQQMRDGKPRSAWPFALGLIVMLPAAVSVLLGVPWAIEWPELRGFNFVGGLTLAP 262

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E+ +L IAL  YT+AFIAEIVRSG+ +VPRGQ +AA ALGL      R ++LPQA+R I+
Sbjct: 263 EYFALLIALVAYTSAFIAEIVRSGIQSVPRGQWDAANALGLRRSFMLRQIILPQALRVIV 322

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP+TSQYLNL KNSSLAVA+G+ D+VSV  T +NQTGQAIE I + M ++L++S+ I+ F
Sbjct: 323 PPMTSQYLNLTKNSSLAVAIGYQDVVSVANTTLNQTGQAIEAIALIMAVFLTISLGISFF 382

Query: 385 MNRLNAKIALKEK 397
           MN  NA+IAL E+
Sbjct: 383 MNWYNARIALVER 395


>gi|86605965|ref|YP_474728.1| polar amino acid ABC transporter permease [Synechococcus sp.
           JA-3-3Ab]
 gi|86554507|gb|ABC99465.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. JA-3-3Ab]
          Length = 390

 Score =  267 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 135/389 (34%), Positives = 224/389 (57%), Gaps = 3/389 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
             +   R  +  + R+  + +Q+   + + ++F     N+  ++ +  +SLG  FL   A
Sbjct: 5   SDQSHLRPPWWRNERILKVLLQVAFVVAVLLVFGILAQNLLASLRRLGISLGFRFLDNSA 64

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I +G++PY    SY  A+ VG VNT WL+   ++ AT +G ++G  RLS+N L   +
Sbjct: 65  NFGITEGLIPYDPSESYLKALAVGAVNTLWLSAVSIVLATAMGFVLGMARLSSNWLARQL 124

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             V  E+FRN+P L+++ F Y+ V+  LP   +S+ +   +F+N RG+  P L       
Sbjct: 125 ATVVTEIFRNVPVLLIVIFWYQGVILTLPGVRNSLSIGGLVFINQRGVKLPGLDPSGWL- 183

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             V +  + I       +L      + G     L+++  ++       ++  +  +  D 
Sbjct: 184 --VPALAIVIAAGWGIRKLLLVCRPELGSRQRNLWVAAGVVLLAVACWVLFPEPPVRLDV 241

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PVL +FNF GG  +S EF ++ + L  YT  +IAE+VR   +AVPRGQ EAA A+GL+  
Sbjct: 242 PVLERFNFRGGIQLSAEFTAMMLGLVTYTGCYIAEVVRGSFLAVPRGQWEAARAVGLSEL 301

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RLV++PQA+R +IP L +QYL L+KNSSLA+AVGF+DL ++  TIINQ+G+++E+  
Sbjct: 302 QTFRLVIVPQALRIMIPSLNTQYLTLIKNSSLAIAVGFSDLFNISSTIINQSGRSVEMFA 361

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I M  YL+ +++++  MN LNA++ L E+
Sbjct: 362 ILMATYLTFNLVVSYGMNWLNARVKLVER 390


>gi|254466381|ref|ZP_05079792.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacterales bacterium Y4I]
 gi|206687289|gb|EDZ47771.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacterales bacterium Y4I]
          Length = 395

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 156/397 (39%), Positives = 226/397 (56%), Gaps = 20/397 (5%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            + D R  +++ Q+I A++L +   +  NN+  N+  + L++   FL + AG++I+Q +V
Sbjct: 2   LINDTRYRSLTFQVIAAIVLALCIWYLGNNLIQNLRAAGLNISYAFLGDSAGYDINQRLV 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S SS+A A LVG +NT  +AF   I ATI G + G  RLS N LV+ +  VYVE+FR
Sbjct: 62  EYDSQSSHARAALVGVLNTLLVAFLACITATIFGVIAGVLRLSNNWLVSKLMAVYVEIFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI-----------VLPFGMFLNNRGLSFPTLTMDTN 186
           NIP L+ I  ++  + +VLP P                  F        L +    +  +
Sbjct: 122 NIPVLIWIIIIFTIMTAVLPGPREFRGDDATSSMLFDAFAFTNRGIYTPLPWFQNGIFES 181

Query: 187 AKIFVFSFVLGIVLSLFA----TRLSRHFHEKTG-KALPLLYISTFLIFGLPTLVLIALK 241
           A +     + G+ LS  A       + +  E TG +   LL +    +     L +I   
Sbjct: 182 ASMNWLLVLAGLGLSWVAAHQINAWANNKQEATGVRPKTLLPVLAAWLVPFLALTMIM-- 239

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             L ++ P L  FNF GG  V    ++L+ ALS YT AFIAE VR+G+ AV +GQ EAA 
Sbjct: 240 -GLTWEYPELKGFNFTGGIKVGGPLIALWFALSIYTGAFIAENVRAGIQAVSKGQTEAAA 298

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQT 360
           ALGL  R+   LV+LPQAMR IIPPL SQ+LN+ KNSSLA+AVG+AD+ +  GG  +NQT
Sbjct: 299 ALGLRPRRVMNLVVLPQAMRVIIPPLISQFLNITKNSSLAIAVGYADITATLGGITLNQT 358

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G+AIE +L+ M  YL+ S++I++ MN  NA + LKE+
Sbjct: 359 GRAIECVLLLMLFYLTASLVISMVMNVYNASVKLKER 395


>gi|126659577|ref|ZP_01730708.1| putative amino acid ABC transporter permease protein [Cyanothece
           sp. CCY0110]
 gi|126619120|gb|EAZ89858.1| putative amino acid ABC transporter permease protein [Cyanothece
           sp. CCY0110]
          Length = 392

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 141/387 (36%), Positives = 220/387 (56%), Gaps = 4/387 (1%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER---AGF 70
            ++ F  D R+  I +Q+++  ++ V  +   NN+ NN  +  L+ G GF+ +    + F
Sbjct: 7   EKIPFWRDSRIIKIIIQVLIISVIIVGLIIFSNNLINNFRQLGLTFGFGFIFDPDLNSRF 66

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            +    +PY     Y  AILVG +N+  +  +G+I A  +G +VG GRLS N LV  I  
Sbjct: 67  NLGDSPIPYQPTDPYYRAILVGLLNSLRVMITGIILAFFLGVIVGLGRLSDNWLVQKIAT 126

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +YVE+ RN P L+ +FF Y +V    P  +  +++   +FL+N+G+  P    +    + 
Sbjct: 127 IYVEIIRNTPLLLQLFFWYFAVFLKFPKINDPLIVFNTIFLSNQGVYLPFPLSNLQTLLA 186

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +  LG +++    R       + G      Y  + +   + ++++I       F    
Sbjct: 187 ILALFLGGIMAFLIWRKQTKVIIQQG-TTGKAYNISLISILILSILIIFFGLYWQFPNYD 245

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                   G  +SPEF +L   L+ YTAAFIAE+VRSG+ +V +GQ EAA ALGL    A
Sbjct: 246 TQLQQIQNGLNLSPEFATLLTGLTIYTAAFIAEVVRSGIQSVSKGQWEAAKALGLNSGLA 305

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+ PQA+R +IPPLTS++LNL KNSSLAVA+G+ D+ +V  TI NQTG++IE++LI 
Sbjct: 306 MRLVIFPQALRVMIPPLTSEFLNLAKNSSLAVAIGYNDIYAVSNTISNQTGKSIEMLLIV 365

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M  YL  +++I+  MN+LN  + LKEK
Sbjct: 366 MATYLIFNLIISSGMNQLNHLVQLKEK 392


>gi|262277477|ref|ZP_06055270.1| general L-amino acid transport system permease protein AapQ [alpha
           proteobacterium HIMB114]
 gi|262224580|gb|EEY75039.1| general L-amino acid transport system permease protein AapQ [alpha
           proteobacterium HIMB114]
          Length = 398

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 157/381 (41%), Positives = 231/381 (60%), Gaps = 6/381 (1%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R+  +  Q +L   L +I  +   N   N+E   +  G  FL+++A F+I   ++ + S
Sbjct: 19  PRIKFVLPQALLFAFLILIVGYFSFNASTNLEARGIDTGFSFLNKKASFDIQFSLIEFDS 78

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y  A LVG +NT  ++  G++ ATI+G + G  RLS+N L + +   Y+E FRNI  
Sbjct: 79  SMTYGRAYLVGLLNTILVSVIGILFATILGFIFGILRLSSNPLASGLATSYIEFFRNISL 138

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ IFF Y +VL  LP  ++SIVL   ++ N +G+ FP   + TN    ++  +   V  
Sbjct: 139 LLQIFFWYFTVLRFLPQTENSIVLFDSIYANIKGVYFP-KFVWTNLSFLIYGLIFTFVSI 197

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG----QFNFI 257
            F    +R   E TGK LP   IS  ++  LPTLV+      + F  P L       N+I
Sbjct: 198 YFFNIYARKLRENTGKILPQFLISLGILIILPTLVVFIFGVGVEFSHPKLEIKMGIANYI 257

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GGS++ PEF++L  ALS YT+ FIAE VR+G++ + +GQ EAA ++GLT+ +  RLV++P
Sbjct: 258 GGSSIIPEFLALAFALSIYTSTFIAENVRAGILGIDKGQKEAAASIGLTNAQVLRLVVIP 317

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R IIPP T+QYLNL KNSSLA A+ + D+V V  GT + QTG+AIEI+ I M  YL+
Sbjct: 318 QALRIIIPPTTNQYLNLTKNSSLAAAIAYPDIVLVFAGTALMQTGRAIEIVTITMLTYLT 377

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           LSI I++FMN  N K++L E+
Sbjct: 378 LSISISIFMNWYNKKVSLTER 398


>gi|159029747|emb|CAO87825.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 378

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 140/387 (36%), Positives = 220/387 (56%), Gaps = 16/387 (4%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL---SERAGF 70
            +  F YD R   I +Q+I+ L++ +IF +   N+  N ++  LS G GFL      A F
Sbjct: 5   QKNSFWYDERFQKIFLQVIILLIVCLIFWFFCRNLVINFQRLRLSFGFGFLFDSDRPASF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    + Y+   +Y  A+LVG VN+  +  +G+  A  +G ++G GRLS N L+  +  
Sbjct: 65  AIGDSPIAYSPTDTYFRALLVGLVNSLRIMITGIFLAISLGIVIGLGRLSDNWLIRQLAT 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +YVE  RN P L+ +FF Y +V   LP  + S+     +FLNN G+  P         + 
Sbjct: 125 IYVETIRNTPLLLQLFFWYFAVFLKLPKIEESLEFFGRVFLNNSGVYLPFPANSFRTWLA 184

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   +LGI++S+F +  ++     T   + ++    +            L++Q     P+
Sbjct: 185 LAIIILGIIISVFLSLKNKLSLCLTSLLILVIIPLIW-----------GLQWQNPQVNPL 233

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               +F  G  +S EF +L I L+ YTAAFIAE VR G+ +V RGQ EAA ALGL     
Sbjct: 234 NQNIDF--GLHLSSEFATLLIGLTVYTAAFIAETVRGGIQSVNRGQWEAAKALGLKPLLV 291

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+ PQA+  IIPPLT++ LNL+KNSSLA+A+G+ D+ ++  TI NQTG+A+E++ + 
Sbjct: 292 MRLVIFPQALPVIIPPLTNECLNLVKNSSLAIAIGYNDIYAISSTIANQTGKAVEMLTVV 351

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M  YL  +++I+L MN+LN ++ ++E+
Sbjct: 352 MATYLFFNLVISLTMNQLNKRVKIQER 378


>gi|86608411|ref|YP_477173.1| polar amino acid ABC transporter permease [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556953|gb|ABD01910.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 390

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 136/389 (34%), Positives = 223/389 (57%), Gaps = 3/389 (0%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
             +   R  +  + R+  + +Q+   + + ++F     N+  +M +  +SLG  FL   A
Sbjct: 5   SDQSHLRPPWWRNERILKVLLQVAFVVAVLLVFGILAQNLLASMRRLGISLGFRFLGNSA 64

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I +G++PY    SY  A+ VG VNT WL+   ++ AT +G ++G  RLS+N L   +
Sbjct: 65  NFGITEGLIPYDPSESYLKALAVGAVNTLWLSAVSIVLATAMGFVLGMARLSSNWLARQL 124

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             V  E+FRN+P L+++ F Y+ V+  LP   +S+ +   +F+N RG+  P L       
Sbjct: 125 ATVITEIFRNVPVLLIVIFWYQGVILTLPGVRNSLSIGGLVFINQRGVKLPGLDPSGWL- 183

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             V +  + I       +L      + G     L+++  +        ++  +  +  D 
Sbjct: 184 --VPALAIVIAAGWGIRKLLLARRPELGSRQRNLWVAAGVALLAVACWVLFPEPPVRLDV 241

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           PVL +FNF GG  +S EF ++ + L  YT  +IAE+VR   +AVPRGQ EAA A+GL+  
Sbjct: 242 PVLERFNFRGGIQLSAEFTAMMLGLVTYTGCYIAEVVRGSFLAVPRGQWEAARAVGLSEL 301

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RLV++PQA+R +IP L +QYL L+KNSSLA+AVGF+DL ++  TIINQ+G+++E+  
Sbjct: 302 QTFRLVIVPQALRIMIPSLNTQYLTLIKNSSLAIAVGFSDLFNISSTIINQSGRSVEMFA 361

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I M  YL+ +++++  MN LNA++ L E+
Sbjct: 362 ILMATYLTFNLVVSYGMNWLNARVKLVER 390


>gi|218246880|ref|YP_002372251.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 8801]
 gi|257059922|ref|YP_003137810.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 8802]
 gi|218167358|gb|ACK66095.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 8801]
 gi|256590088|gb|ACV00975.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 8802]
          Length = 390

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 141/387 (36%), Positives = 217/387 (56%), Gaps = 4/387 (1%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS---ERAGF 70
            ++ F  D R  N   Q I+ +++ +       N+  N ++  LS  + F+      A F
Sbjct: 5   EKIPFWRDSRFLNNLGQGIILVIVLISVGILATNLVTNFQRLGLSFDLSFIFDPKRPASF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I   ++PY +   Y+ AILVG +N+  +  SG+I A I+G  VG GRLS N LV  I  
Sbjct: 65  RIGDSLIPYRATDPYSQAILVGLLNSLRVMISGIILAFILGLTVGLGRLSDNWLVRQIAT 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VY+E  RN P L+ +FF Y +V   LP  D+        FL N+G+  P    +    + 
Sbjct: 125 VYIETIRNTPLLLQLFFWYFAVFLKLPKIDNPAQFLNSFFLCNQGIYLPYPANNLQTWLA 184

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +    + ++  +   R       + G     +Y +  +   +  L+LI       F +  
Sbjct: 185 LSLIAINVICGIIIWRKYNDNIVQLG-TTGKIYQNLLIAILIIILLLIIWGLNWQFPQYN 243

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +GG T+SPEF +L + L+ YTAAFIAE++R+G+ +V +GQ EAA ALGL     
Sbjct: 244 TESKRILGGLTLSPEFATLLLGLTVYTAAFIAEVIRAGIQSVSQGQWEAAKALGLNSSLV 303

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+ PQA+R IIPPLTS++LNL+KNSSLAVA+G+ D+ ++  TI NQTG+A+E++L+ 
Sbjct: 304 MRLVIFPQALRVIIPPLTSEFLNLVKNSSLAVAIGYNDIYAIANTISNQTGKAVEMLLVV 363

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M  YL  +++IA+ MN+ NA + +KE+
Sbjct: 364 MTTYLIFNLIIAVIMNQFNAMVQIKER 390


>gi|71083647|ref|YP_266367.1| amino acid ABC transporter [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062760|gb|AAZ21763.1| amino acid ABC transporter [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 381

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 159/381 (41%), Positives = 230/381 (60%), Gaps = 7/381 (1%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           ++  I  Q++  L + +IF +   N   NM+   +  G GFL++ A F+I   ++ Y   
Sbjct: 2   KLKKILPQLLTLLFIVLIFGFFTMNAQENMDTRGIEFGFGFLTQEASFDIQFSLIDYDGS 61

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SYA A LVG +NT  +AF G+I AT++G +VG  RLS N L+      Y+E FRN+P L
Sbjct: 62  HSYARAYLVGLLNTLLVAFIGIILATLLGLIVGVARLSPNYLIRKTASFYIEFFRNVPLL 121

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + IFF Y + L  LP+P  + +L    F+  +GL  P   + TN  IF  + ++ ++L  
Sbjct: 122 LQIFFWYFAALRALPMPQDATLLLGSSFMTIKGLYTPAP-IWTNFDIFFTTLIVAMILIF 180

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-----QFNFI 257
           F  + ++   E+ GK LP+L IS  +  GLP L  +     L F  P L       + F 
Sbjct: 181 FFVKFAKKKQEQEGKQLPVLIISLAIFIGLPLLTFLVGGVDLSFSFPELRKMSQSSYTFD 240

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  + PE ++L +AL+ YTA FIAE VR+G+  + +GQ EAA ++GLT  +  +LV++P
Sbjct: 241 GGMGIPPELIALTLALTLYTATFIAENVRAGIQGIGKGQKEAAASIGLTPSQVLKLVIMP 300

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R IIPP T+QYLNL KNSSLA A+ + DLV V  GT + QTG+AIEI+ I M  YL+
Sbjct: 301 QALRIIIPPTTNQYLNLTKNSSLAAAIAYPDLVLVFAGTAMMQTGKAIEIVGITMATYLT 360

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +SI I+L MN  N +IA+KEK
Sbjct: 361 ISIAISLLMNWYNQRIAIKEK 381


>gi|260427206|ref|ZP_05781185.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Citreicella sp. SE45]
 gi|260421698|gb|EEX14949.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Citreicella sp. SE45]
          Length = 410

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 138/406 (33%), Positives = 219/406 (53%), Gaps = 18/406 (4%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
              + F   + +YD R  ++++Q++  +LL ++F W V+N  +N++        GFL + 
Sbjct: 7   PPGQGFRLSQLIYDTRYRSLTIQVVAMILLMLLFSWLVSNTIHNLQNLGKDFDFGFLWQP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +G++I+Q ++ Y S S++  A LVG +NT  +A  G   AT++G + G  RLS N LVA 
Sbjct: 67  SGYDINQRLIDYNSQSTHGRAALVGILNTLLVAALGCALATVLGVIAGVLRLSNNWLVAR 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI--------------VLPFGMFLNN 173
           +   YVE FRN+P L+ I  ++  +    P P                  +   G+++  
Sbjct: 127 LMAFYVEGFRNVPLLLWIVLIFALMTEGTPAPSAFRGDTPSASMLFDAVAITNRGVYIPA 186

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYISTFLIFGL 232
              +           + + +     V  +      +    E TG      Y++  ++   
Sbjct: 187 IHFNAAFFESGLYNWLLIIAVFAASVFVVKRIGHWAAVKQEATGDRPTTWYLTLGVLIVP 246

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             ++++ +    +FD P L  FNF GG  +    ++L++ALS YT AFIAEIVR G++A+
Sbjct: 247 TAILMVLMG--AYFDLPSLQGFNFGGGVHLRGSLIALWLALSLYTGAFIAEIVRGGILAI 304

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL-VS 351
            +GQ EAA ALGL       LV+LPQA+R IIPPL SQ+LNL KNSSLA+AVG+ D   +
Sbjct: 305 SKGQSEAAFALGLRPGTTMNLVILPQALRVIIPPLISQFLNLTKNSSLAIAVGYMDARST 364

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GG  INQTG+ +E +L+    YL LS++I+  MN  N  + LKE+
Sbjct: 365 LGGITINQTGRELEGMLLLGLFYLVLSLLISGVMNVYNNSVKLKER 410


>gi|67922407|ref|ZP_00515918.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501]
 gi|67855751|gb|EAM50999.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501]
          Length = 392

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 142/387 (36%), Positives = 222/387 (57%), Gaps = 4/387 (1%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER---AGF 70
            ++ F  D R+  + +Q+++  ++ ++ ++  NN+ NN  +  L+ G GF+ +    + F
Sbjct: 7   EKIPFWRDSRIIKVVIQVLVIGVILLLLVFFGNNLVNNFRQLGLTFGFGFIFDPELNSRF 66

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    +PY     Y  AILVG +N+  +  +G+I A I+G ++G GRLS N LV  I  
Sbjct: 67  NIGDSPIPYQPTDPYYRAILVGLLNSLRVMITGIILAFILGVIIGLGRLSDNWLVQKIAT 126

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVE+ RN P L+ +FFLY +V    P  D  +++   +FL+N+G+  P    +    + 
Sbjct: 127 VYVEIIRNTPLLLQLFFLYFAVFLKFPKIDAPLIIFNSVFLSNQGVYVPFPLANLQTFLA 186

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +   G V++    R       + G      Y    ++  + +++ I L +   F    
Sbjct: 187 ILTLFFGGVIAFLIWRKQTQTIIQQG-TTGNFYNLALIVIIIVSILTIILGFDWEFPSYD 245

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                   G  +SPEF +L   L+ YTA FIAE+VRSG+ +V +GQ EAA ALGL    A
Sbjct: 246 SQIKRIQDGLNISPEFATLLAGLTIYTAGFIAEVVRSGIQSVSKGQWEAAKALGLNSGLA 305

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+ PQA+R +IPPLTS++LNL KNSSLAVA+G+ D+ +V  TI NQTG++IE++L+ 
Sbjct: 306 MRLVIFPQALRVMIPPLTSEFLNLAKNSSLAVAIGYNDIYAVSNTISNQTGKSIEMLLVV 365

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M  YL  +++I+  MN LN  + LKEK
Sbjct: 366 MATYLIFNLIISTVMNLLNRSVQLKEK 392


>gi|126731934|ref|ZP_01747737.1| amino acid ABC transporter, permease protein [Sagittula stellata
           E-37]
 gi|126707466|gb|EBA06529.1| amino acid ABC transporter, permease protein [Sagittula stellata
           E-37]
          Length = 417

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 140/408 (34%), Positives = 224/408 (54%), Gaps = 16/408 (3%)

Query: 6   RKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS 65
           ++           ++D R  ++  Q +LAL++  +    + N   N+   N   G  F  
Sbjct: 10  QQGTEERTGLAALVFDSRARSLFFQGVLALIIIGLIWLALQNAAQNLADQNKEFGFDFFD 69

Query: 66  ERAGFEI----DQGIVPYTSD-SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             +  +I       ++ Y    S+     L+   NT  +A +G+  ATI G L+G  RLS
Sbjct: 70  RPSDIQILTTFGTWLLDYQPGQSTIFDVFLLSIANTLIVAIAGIFFATIWGFLLGIFRLS 129

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP--IPDHSIVLPFGMFLNNRGLSF 178
           +N ++     +YVE+ RN+P L+ IFF    +  V P     ++ ++P  +  + +G+  
Sbjct: 130 SNFVLRGFATIYVELLRNVPLLLQIFFWTAVMRIVAPSERGVYTTLIPGLLQFDAKGMYG 189

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           P   ++      + +F++  + +    R ++   +KTG+  P+  +S  +I  LPTLV +
Sbjct: 190 PFPIVEDGFGFTLAAFIIACIGAWAYARWAKKRQDKTGQPSPVFLVSLGMIVVLPTLVYL 249

Query: 239 ALKYQLHFDKP--------VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                +  + P            F    GS ++PEF++L++AL  YTAAFIAEIVR+G+ 
Sbjct: 250 ITGRPITIEWPNYVTEGPIFRQGFEKGVGSYIAPEFVALFLALFTYTAAFIAEIVRAGIQ 309

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EAA ALGL      R V+LPQA R I+PPLTSQYLNL KNSSLA A+G+ +LV
Sbjct: 310 AVPKGQSEAAGALGLPDGLTMRKVVLPQAFRVIVPPLTSQYLNLTKNSSLAAAIGYPELV 369

Query: 351 SV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   GTI+NQ G+AIEII + + +YL++S++ + FMN  N ++AL E+
Sbjct: 370 AAFAGTILNQVGRAIEIIAVVILVYLTISLLTSAFMNWFNNRVALVER 417


>gi|91763313|ref|ZP_01265277.1| amino acid ABC transporter [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717726|gb|EAS84377.1| amino acid ABC transporter [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 381

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 158/381 (41%), Positives = 229/381 (60%), Gaps = 7/381 (1%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           ++  I  Q++  L + +IF +   N   NM+   +  G GFL++ A F+I   ++ Y   
Sbjct: 2   KLKKILPQLLTLLFIVLIFGFFTMNAQENMDTRGIQFGFGFLTQEASFDIQFSLIDYDGS 61

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SYA A LVG +NT  +AF G+I AT++G +VG  RLS N L+      Y+E FRN+P L
Sbjct: 62  HSYARAYLVGLLNTLLVAFIGIILATLLGLIVGVARLSPNYLIRKTASFYIEFFRNVPLL 121

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + IFF Y + L  LP+P  + +L    F+  +GL  P   + TN  IF  + +  ++L  
Sbjct: 122 LQIFFWYFAALRALPMPQDATLLLGSSFMTIKGLYTPAP-IWTNFDIFFTTLIAAMILIF 180

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-----QFNFI 257
           F  + ++   E+ GK LP+L +S  +  GLP L  +     L F  P L       + F 
Sbjct: 181 FFVKFAKKKQEQEGKQLPVLIVSLAIFIGLPLLTFLVGGVDLSFSFPELRKMSQSSYTFD 240

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  + PE ++L +AL+ YTA FIAE VR+G+  + +GQ EAA ++GLT  +  +LV++P
Sbjct: 241 GGMGIPPELIALTLALTLYTATFIAENVRAGIQGIGKGQKEAAASIGLTPSQVLKLVIMP 300

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R IIPP T+QYLNL KNSSLA A+ + DLV V  GT + QTG+AIEI+ I M  YL+
Sbjct: 301 QALRIIIPPTTNQYLNLTKNSSLAAAIAYPDLVLVFAGTAMMQTGKAIEIVGITMATYLT 360

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +SI I+L MN  N +IA+KEK
Sbjct: 361 ISIAISLLMNWYNQRIAIKEK 381


>gi|217977866|ref|YP_002362013.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylocella silvestris BL2]
 gi|217503242|gb|ACK50651.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylocella silvestris BL2]
          Length = 391

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 158/388 (40%), Positives = 228/388 (58%), Gaps = 1/388 (0%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R    ++  YD R   + +QI        +      +V  NME   ++  + FL + AGF
Sbjct: 4   RRHPALELWYDARARAVLLQIAFVAAFVALAALAFIDVRANMEARGIATDLSFLGKVAGF 63

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I+Q ++PY++ S+Y  A +VG +NT  +A   +  AT++G +VG  RLS N +V     
Sbjct: 64  DINQSLIPYSAASTYGRAFIVGLLNTLLVAAVSLALATVLGFIVGFARLSKNWIVGQTAM 123

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YVE  RN+P L+ + F Y +VL  LP P  S+ LPFGMFLNNRGL  P    +  A   
Sbjct: 124 AYVEAVRNVPLLLQLLFWYNAVLKPLPSPKQSLPLPFGMFLNNRGLFAPAPVFEAGAFWL 183

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +  + I+ ++      +     T        ++  ++  LP    +     + F +P 
Sbjct: 184 VIAAAVSILAAIAMRLTPKRVKFATPPRAFFSGVAAAVLIVLPLAAFVGAGTPIAFIQPE 243

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  FNF+GG  + PEF++L + LS YTAAFIAEIVR+G+ AVPRGQ EAA A+GL    A
Sbjct: 244 LKGFNFVGGVRLLPEFVALVLGLSLYTAAFIAEIVRAGVEAVPRGQREAAAAIGLNSAAA 303

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILI 369
            R V+ PQAMR I+P LTSQYLNL+KNSSLAV +G+ DLV V  GT++NQTG A+++I I
Sbjct: 304 NRFVIAPQAMRLIVPLLTSQYLNLIKNSSLAVFIGYPDLVQVFAGTVLNQTGAAVQVIFI 363

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
            M +YL++S++ +L MN    + AL E+
Sbjct: 364 TMAVYLAISLLASLAMNLYGRRFALVER 391


>gi|288959841|ref|YP_003450181.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912149|dbj|BAI73637.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 406

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 153/370 (41%), Positives = 218/370 (58%), Gaps = 4/370 (1%)

Query: 29  VQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATA 88
           +Q ++  L+ +      +N   NME+  ++ G  FL   AGFEI + ++ Y    SYA A
Sbjct: 41  LQAVILALVLLGGFLLGSNTLANMERFGITPGFAFLGRPAGFEIGEALLDYRPQDSYALA 100

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG +NT  +A +G + AT++G L+G  RLS N L++ + + YVE+ R+ P L+ +FF 
Sbjct: 101 LLVGLLNTVKVAVAGCLIATVLGVLLGVARLSGNALLSGLVQGYVELVRSTPLLLQLFFW 160

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
             +    LP P  ++    G+FL NRG+  P           + +  L +VL+L  T L 
Sbjct: 161 -SATFQALPSPRQALNPLPGVFLCNRGIQLPAFADGRAGGALLAAIGLALVLALAGTALR 219

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +P   +     FGLP   L++    L  + P L  FNF GG+TVSPEF +
Sbjct: 220 RRMG---LRDVPSAAMVAAAAFGLPITPLLSSGVPLQVEFPELSGFNFNGGTTVSPEFSA 276

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L + L    AA IAEIVRSG+ AVP GQ EAA ALGL  R+  +LV+LPQAMR I+P LT
Sbjct: 277 LLVGLVVNAAAMIAEIVRSGIQAVPAGQWEAARALGLPRRRIMQLVVLPQAMRVIVPLLT 336

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S YLNL KNSSLAVA+GF DLVSV  T  NQTGQ +E + I M  YL++++ +++ MN  
Sbjct: 337 SSYLNLTKNSSLAVAIGFPDLVSVINTSANQTGQVLETMAIMMGAYLTMNLAVSVAMNLY 396

Query: 389 NAKIALKEKK 398
           N ++A +  +
Sbjct: 397 NRRLAARGAR 406


>gi|254475629|ref|ZP_05089015.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Ruegeria sp. R11]
 gi|214029872|gb|EEB70707.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Ruegeria sp. R11]
          Length = 410

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 151/404 (37%), Positives = 224/404 (55%), Gaps = 14/404 (3%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
                F     + D R  +++ Q I AL+L +   +  NN+  N+  + L++   FL + 
Sbjct: 7   PPKEQFQLSMLVNDTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYNFLGDP 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +G++I+Q +V Y S SS+A A LVG +NT  ++    I ATI G + G  RLS N LV+ 
Sbjct: 67  SGYDINQRLVEYDSQSSHARAALVGVLNTLLVSVLACITATIFGVIAGVLRLSNNWLVSK 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS--------IVLPFGMFLN---NRGL 176
           +  VYVE+FRNIP L+ I  ++  + +V+P P           +VL    F N      +
Sbjct: 127 LMAVYVEIFRNIPVLIWIIIIFTIMTAVMPGPREFRGDNATSSMVLDLFAFTNRGVYIPM 186

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK--ALPLLYISTFLIFGLPT 234
            +    +  +A +     +  +V S F  R   +   KT +   +        L   L  
Sbjct: 187 PWFETGLFASATMNWLLVIATLVGSFFVMRKVENNATKTQEETGIRPNTKWIALGVWLVP 246

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVL+     L ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +
Sbjct: 247 LVLLLFLMGLSWEVPALKGFNFSGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINK 306

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-G 353
           GQ EAA ALGL   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ +  G
Sbjct: 307 GQTEAAAALGLRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLG 366

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +NQTG+AIE +L+ M  YL+ S+ I++ MN  NA + LKE+
Sbjct: 367 GITLNQTGRAIECVLLLMLFYLTASLTISMVMNVYNASVKLKER 410


>gi|313902269|ref|ZP_07835674.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467420|gb|EFR62929.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 392

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 145/358 (40%), Positives = 205/358 (57%), Gaps = 1/358 (0%)

Query: 39  VIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFW 98
               +   NV  N+++  ++ G  FL   A F I +  +PY +   Y  A L G VNT  
Sbjct: 33  AAGTYLFGNVQRNLQQLGITPGFDFLRHPASFAIGESSIPYQATDPYGRAFLAGLVNTLR 92

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ AT +G + G  RLSAN LV  +  +YVEV RN P L+ +FF Y +++  LP 
Sbjct: 93  VAVLGVVLATAVGVVAGLARLSANGLVRLLASLYVEVTRNTPLLLQLFFWYGAIVYTLPP 152

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
              ++ LP  +FL NRGL  P           V    L +V +  A R+      + G+A
Sbjct: 153 ASQALALPGSVFLMNRGLVLPAPRPGPGFPTAVAILGLALVAAATAYRILLRKRLEEGRA 212

Query: 219 L-PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             P L     L  G     ++     L  ++P L +FNF GG  +S EF +L +AL  YT
Sbjct: 213 TRPGLVALGLLAAGGLAAAILPAGPALVLERPQLARFNFQGGLMLSAEFTALLLALVIYT 272

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AFIAE+VR G++AVPRGQ EAA +LGL+     RLV+ PQA+R I+PPLTSQYLNL+KN
Sbjct: 273 GAFIAEVVRGGVLAVPRGQWEAARSLGLSPFLVQRLVVFPQALRIIVPPLTSQYLNLIKN 332

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           SSLA+AV F DL++V  TI+NQTG+ +E++L+    YL+ S++ +L MN  N  +   
Sbjct: 333 SSLAMAVAFPDLLNVSSTIVNQTGRTLEMLLLVGATYLAFSLLTSLLMNLYNRSLRRG 390


>gi|326794955|ref|YP_004312775.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326545719|gb|ADZ90939.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 418

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 136/386 (35%), Positives = 215/386 (55%), Gaps = 3/386 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S+++   +     + +Q ++         +  +N  NN+++  +  G  FL   AGF I 
Sbjct: 34  SKVRLFDNDATRGVLIQALVLAAFLFGAWYLFSNAANNLDRLGMHFGFDFLQVTAGFNIS 93

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++PY S  +Y     VG +NT  L+   +   TI+GT VG  RLS N L++   R YV
Sbjct: 94  WSVIPYDSSMTYWRVFAVGVLNTLVLSALVIFVGTILGTFVGILRLSNNPLISQFARWYV 153

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+ RN+P L+ + F +  V S LP P  S  +    FLNNRGL  PT+ +  +   +VF+
Sbjct: 154 EIVRNVPLLIQVIFWFTVVFSTLPPPRKSYSIADVFFLNNRGLYIPTIELSISFW-WVFA 212

Query: 194 FVLGIVLSLFAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            V+ +   L+A  R S     KTGK     YI   +   +  L  + L     +  P L 
Sbjct: 213 LVIALGAGLWAIIRQSSRSVHKTGKRTTTFYILVLIWCVIFALSALLLAQWGTWSIPELK 272

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            FNF  G+ +     + ++A++ Y +A IAE VR+G+ ++ RGQ EAA  +G +  ++ R
Sbjct: 273 GFNFRDGAFLPASLGAAFVAMTVYRSAAIAETVRAGMQSIDRGQSEAAFTIGFSRFQSLR 332

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWM 371
           L+L+PQA+R+IIPP+T+ +L   K+SSLAVA+GF +LVSV   T INQTG+A+EII + M
Sbjct: 333 LILIPQAVRAIIPPMTNSWLAATKDSSLAVAIGFPELVSVFMQTSINQTGRALEIISMVM 392

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
             Y+ +S++I+  +N+ N  +  K +
Sbjct: 393 GFYIVISLVISYLLNKYNDLVQYKVR 418


>gi|284052500|ref|ZP_06382710.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira platensis str. Paraca]
          Length = 390

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 139/390 (35%), Positives = 210/390 (53%), Gaps = 1/390 (0%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
           T      ++    D R   I+ Q+I+ +++  I      N+  N+++S +  G GFL+  
Sbjct: 2   TTNPNQPKIPLWRDDRFGKIAFQVIILVIVIAIISIFTMNLNQNLQRSGIRFGFGFLNST 61

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF I + I+PY     Y   +L G VNT  + F G+I  TI+G + G    S+N LV  
Sbjct: 62  AGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIILTTIVGIIAGISYFSSNWLVRQ 121

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I  VYVE+ RN P L+ + F Y   L + P     + +   +FL  RG+  P  +     
Sbjct: 122 IGLVYVEIVRNTPLLLQLLFWYGIFLQL-PSVSDRLGVFDAIFLTQRGIFIPWPSSSLIW 180

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
               F  +  I       + ++   EK     P L     +      ++L    +++   
Sbjct: 181 VWLGFLVIAAIASFWIWKQRTKIMVEKGASGQPQLIALGIIALVSLLIILFGFGWEVPAI 240

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                     GG  ++ EF +L + L  YTAA+IAEIVR+G+ +V +GQ EAA +LGL  
Sbjct: 241 TGTENNPVLRGGIRLTIEFSALLVGLVFYTAAYIAEIVRAGIQSVAKGQWEAARSLGLKP 300

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               RLV+ PQA+R IIPPL SQYLNL KNSSLA+AV +ADL +V  T  NQ+G+A+E++
Sbjct: 301 GLVMRLVVFPQALRVIIPPLNSQYLNLAKNSSLAIAVAYADLYNVANTTFNQSGRAVEVM 360

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LI M  YL+++++I+LFMN LN ++ L+E+
Sbjct: 361 LIIMATYLTINLIISLFMNFLNRRVQLQER 390


>gi|86135804|ref|ZP_01054383.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseobacter sp. MED193]
 gi|85826678|gb|EAQ46874.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseobacter sp. MED193]
          Length = 395

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 145/396 (36%), Positives = 222/396 (56%), Gaps = 18/396 (4%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            + D R  +++ Q I AL+L +   +  NN+  N+  + L++   FL +RAG++I+Q ++
Sbjct: 2   LVNDTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYNFLGDRAGYDINQHLI 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S SS+A+A +VG +NT  +AF   I AT+ G + G  RLS N LV+ +  VYVE+FR
Sbjct: 62  DYDSQSSHASAAVVGILNTLLVAFLACITATVFGVVAGVLRLSNNWLVSKLMAVYVEIFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI--------------VLPFGMFLNNRGLSFPTLTM 183
           NIP L+ I  ++  + +V+P P                      G++             
Sbjct: 122 NIPVLIWIIIIFTIMTAVMPGPREFRGDDPSASMVLDLFAFTNRGVYTPMPMFESGLFAS 181

Query: 184 DTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                + V  F++G    +      +    E TG     L+I+  +      L  + L  
Sbjct: 182 AALNWLLVLVFLIGSFFVMRMVNANATQKQEATGIRPNTLFINLAVWIVPFAL--LMLVM 239

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA A
Sbjct: 240 GLTWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAAA 299

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LG+   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ +  GG  +NQTG
Sbjct: 300 LGMRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGVTLNQTG 359

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +AIE +L+ M  YL++S++I++ MN  NA + LKE+
Sbjct: 360 RAIECVLLLMLFYLTVSLLISMVMNVYNASVKLKER 395


>gi|291569087|dbj|BAI91359.1| putative ABC transporter permease protein [Arthrospira platensis
           NIES-39]
          Length = 390

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 138/390 (35%), Positives = 210/390 (53%), Gaps = 1/390 (0%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
           T      ++    D R   I+ Q+I+ +++  I      N+  N+++S +  G GFL+  
Sbjct: 2   TTNPNQPKIPLWRDDRFGKIAFQVIILVIVIAIISIFTMNLNQNLQRSGIRFGFGFLNST 61

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF I + I+PY     Y   +L G VNT  + F G+I  TI+G + G    S+N LV  
Sbjct: 62  AGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIILTTIVGIIAGISYFSSNWLVRQ 121

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I  VYVE+ RN P L+ + F Y   L + P     + +   +FL  RG+  P  +     
Sbjct: 122 IGLVYVEIVRNTPLLLQLLFWYGIFLQL-PSVSDRLGVFDAIFLTQRGIFIPWPSSSLIW 180

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
               F  +  I       + ++   EK     P L     +      ++L    +++   
Sbjct: 181 VWLGFLVIAAIASFWIWKQRTKIMVEKGASGQPQLIALGIIALVSLLIILFGFGWEVPAI 240

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                     GG  ++ EF +L + L  YTAA+IAEIVR+G+ +V +GQ EAA +LGL  
Sbjct: 241 TGTENNPVLRGGLRLTIEFSALLVGLVFYTAAYIAEIVRAGIQSVAKGQWEAARSLGLKP 300

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               RLV+ PQA+R IIPPL SQYLNL KNSSLA+AV +ADL +V  T  NQ+G+A+E++
Sbjct: 301 GLVMRLVVFPQALRVIIPPLNSQYLNLAKNSSLAIAVAYADLYNVANTTFNQSGRAVEVM 360

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +I M  YL+++++I+LFMN LN ++ L+E+
Sbjct: 361 VIIMATYLTINLIISLFMNFLNRRVQLQER 390


>gi|328950981|ref|YP_004368316.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
 gi|328451305|gb|AEB12206.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
          Length = 392

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 145/392 (36%), Positives = 208/392 (53%), Gaps = 18/392 (4%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
             + F  D RV N+ VQ++ AL    +  + +   Y  M    +     FL + AGF I 
Sbjct: 4   RTIPFWRDARVLNLVVQVLAALFALGLIAFLLFTAYRGMVARGIPFTFSFLGQEAGFTIS 63

Query: 74  QGIV-----------PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           +G V           P+    +Y  A   G  NT  +A  G++  TI+G LVG GRLS+N
Sbjct: 64  EGPVLALEDGRLVLRPFKPSDAYWQAFFAGIYNTLRVALVGIVLTTILGVLVGIGRLSSN 123

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            LV  +   YVE+ RN P LV +FF Y   +   P    +     G+  + RG+  P   
Sbjct: 124 WLVNRLAFAYVELVRNTPLLVQMFFWYFGAILKFPPVRQASEWFGGLIASQRGIFLPWPV 183

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                  F      G++L++      R        AL  L +          +  +    
Sbjct: 184 PTDAWPRFEPFLWGGLLLAVGVYLALRRQGWARWSALGALVL-------AWGVGWLVSGG 236

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L   +P LG+F   GG T+SPEF ++ +AL  YTA++IAEIVR  + ++P+GQ EAA +
Sbjct: 237 PLAISEPELGRFRVTGGLTLSPEFSAVLLALVIYTASYIAEIVRGAIQSLPKGQWEAATS 296

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGLT+ +  RLV+LPQAMR IIPPL +QYLNL KNSSLA+AVG+ +L +V GTI NQ+G+
Sbjct: 297 LGLTYAQTMRLVILPQAMRIIIPPLGNQYLNLTKNSSLAIAVGYPELFNVYGTIANQSGR 356

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++E ILI M  YLS+S+ I+  +N  N ++ L
Sbjct: 357 SLEGILIVMAAYLSMSLTISALVNWYNRRVTL 388


>gi|163740275|ref|ZP_02147669.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis 2.10]
 gi|161386133|gb|EDQ10508.1| binding-protein-dependent transport systems inner membrane
           component [Phaeobacter gallaeciensis 2.10]
          Length = 395

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 145/394 (36%), Positives = 219/394 (55%), Gaps = 14/394 (3%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            + D R  +++ Q I AL+L +   +  NN+  N+  + L++  GFL + +G++I+Q ++
Sbjct: 2   LVNDTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYGFLGDPSGYDINQRLI 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S SS+A A +VG +NT  +A    I ATI G + G  RLS N LV+ +  VYVE+FR
Sbjct: 62  EYDSQSSHARAAVVGVLNTLLVAVLACITATIFGVVAGVLRLSNNWLVSKLMAVYVEIFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF--- 194
           NIP L+ I  ++  + +V+P P           +     +F    +      F   F   
Sbjct: 122 NIPVLIWIIIIFTIMTAVMPGPREFRGDNATSSMLFDLFAFTNRGVYIPMPWFESGFFAS 181

Query: 195 --------VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT--LVLIALKYQL 244
                   +  +V S    R       KT +   +   +  +  G+    L L+     L
Sbjct: 182 GALNWLVVIAALVGSFLVMRRIEANATKTQEKTGVRPKTKLIALGVWLVPLALVLFVMGL 241

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA ALG
Sbjct: 242 SWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAINKGQTEAAAALG 301

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQA 363
           L   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ +  GG  +NQTG+A
Sbjct: 302 LRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTGRA 361

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           IE +L+ M  YL+ S++I++ MN  NA + LKE+
Sbjct: 362 IECVLLLMLFYLTASLLISMVMNVYNASVKLKER 395


>gi|51245287|ref|YP_065171.1| amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50876324|emb|CAG36164.1| probable amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 390

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 151/357 (42%), Positives = 222/357 (62%), Gaps = 1/357 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
           +FL+D R  +   Q  + L+L     +   NV +N++K+ ++ G  FL E AGF+I Q +
Sbjct: 22  RFLHDARFRSYLAQATVLLVLIAALSYGGYNVVHNLQKAGVTTGFAFLDETAGFDISQTL 81

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y+S S+YA A++VG +NT  ++  G++ +T++G  +   RLS+N LV+ +   YVE+ 
Sbjct: 82  IAYSSKSTYADALVVGLLNTLLVSALGIVFSTVLGFSLAVLRLSSNWLVSKLATTYVEII 141

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RNIP L+ I F Y ++L+ LP    ++      +L NRGL  P   +D    +   +  L
Sbjct: 142 RNIPLLLQILFWYLAILAPLPSARKALSFEGIAYLCNRGLQLPRPVLDGGGNLVALALGL 201

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            +V+S F  R +     +TG+  P +  S  LI  LP + L  + + LH++ PVL  FNF
Sbjct: 202 ALVVSFFFIRWNHLRQRRTGRRFPAVLFSLVLIISLPLVALACMGFPLHWELPVLKGFNF 261

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG TV PE ++L +AL+ YTA FI+E VRSG+++V RGQ EAA ALG       RL++L
Sbjct: 262 RGGITVLPELIALLLALTLYTATFISEYVRSGIMSVDRGQKEAAEALGYQPWMIYRLIIL 321

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMF 372
           PQAMR  IPPL SQYL L+KNSSLAV +G+ DL+ V  GT++NQ+GQA+EII I M 
Sbjct: 322 PQAMRVAIPPLISQYLTLVKNSSLAVVIGYPDLIHVFAGTVLNQSGQAMEIIAITMA 378


>gi|300865205|ref|ZP_07110023.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
 gi|300336796|emb|CBN55173.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
          Length = 401

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 153/393 (38%), Positives = 227/393 (57%), Gaps = 2/393 (0%)

Query: 7   KTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE 66
             +  + S  K L D R   ++ Q I A+L+ V      NN+  N+ +  ++LG  FL  
Sbjct: 9   PNLLNFRSLSKLLRDDRFWKVAGQAIAAILVVVFAAIIWNNLTANLRQLGINLGFDFLGS 68

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           +A F+I + I+PY   +S+A A+LVG VN+F +   G++ ATI+G  VG  RLS N LV 
Sbjct: 69  QASFDIGESIIPYNPSNSFAQAMLVGLVNSFRVMGVGLVTATIVGLTVGIARLSDNWLVR 128

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  +YVE+ RN P L+ +FF Y +V   LP  + S       +L N G++ P LT +  
Sbjct: 129 NLATIYVEILRNTPLLLQLFFWYFAVFISLPRLESSTPFLGSFYLTNLGIAIPWLTGNPG 188

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLH 245
             +++    +GI+ +++  R       +TG A      ++  I     +  I        
Sbjct: 189 TGLWLILLAVGILAAVWLWRWRTRVRLETGAAGRQFIWASGAILLTAIIAFIITRNPPFT 248

Query: 246 FDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            D P V+ +    GG  ++PEF +L   L+ YTA+FIAEIVR+G+ +VP+GQ EA  ALG
Sbjct: 249 LDIPRVIERTQLEGGLKLTPEFATLLTGLTLYTASFIAEIVRAGIQSVPQGQWEAGKALG 308

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L      RLV+LPQA+R IIPPLTSQYLNL KNSSLAVA+G+ D+  V  T  NQTG+ +
Sbjct: 309 LKSGLMMRLVILPQALRVIIPPLTSQYLNLAKNSSLAVAIGYPDVYFVASTTFNQTGRVV 368

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E++L+ M  YL++S+ IA+ MN  N  + +KE+
Sbjct: 369 EVMLLIMVTYLTISLSIAIVMNLYNRSVQIKER 401


>gi|158334196|ref|YP_001515368.1| polar amino acid ABC transporter, permease protein, putative
           [Acaryochloris marina MBIC11017]
 gi|158304437|gb|ABW26054.1| polar amino acid ABC transporter, permease protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 389

 Score =  262 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 135/382 (35%), Positives = 208/382 (54%), Gaps = 1/382 (0%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
                 R+ N  +Q ++ LL+ +  ++   N+  N+++  L  G  FL  ++G  I + +
Sbjct: 8   PKWRQPRIRNGLIQGLVLLLIGLAVVYFGANLVQNLQRLRLPFGFDFLFAKSGPSIGETL 67

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y+   + A A  V  +NT  +   G++ AT++G  VG  RLS N LV  +   YVE  
Sbjct: 68  IEYSPTDNIARAFGVALLNTLRVVVLGIVLATVVGIGVGMARLSDNWLVRKLATFYVETL 127

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN P L+ + F Y +V   LP  ++ I LP  + L+  G++FP L  +     ++ +  +
Sbjct: 128 RNFPLLLQLLFWYLAVFLKLPTFENRIQLPGPIILSKNGVAFPWLKGNPATLPWILALAI 187

Query: 197 GIVLSLFATRLSRHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           G V +    R       + G+     L+    L+       LI  +       P + Q  
Sbjct: 188 GSVCACLLWRYLIRLQIEQGRITFAGLWSLLLLVGIGGGAALITQRLPFDVSLPHVDQRV 247

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             GG  ++ EF +L + L+ YTAAFIAEIVR+G+ +V  GQ EAA ALGL      R V+
Sbjct: 248 VTGGLQLTSEFSALLLGLTLYTAAFIAEIVRAGIRSVSIGQSEAARALGLKPTLVMRFVV 307

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQA+R I+PPLTSQYLNL KNSSLAVAVG+ D+  V    +  TG+++EI+L+ M IYL
Sbjct: 308 FPQALRVIVPPLTSQYLNLAKNSSLAVAVGYPDIYYVASASLEDTGRSVEIVLLLMAIYL 367

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
           ++S++I++ MN  N  I L E+
Sbjct: 368 TMSLLISILMNLYNRSIQLVER 389


>gi|152994192|ref|YP_001339027.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835116|gb|ABR69092.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 410

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 138/392 (35%), Positives = 217/392 (55%), Gaps = 3/392 (0%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
             +     M  L +     + +Q I+ +L+     +   N   N+ +  ++ G  FL   
Sbjct: 20  PSSTTQKWMSLLNNDSSRAVILQAIVLVLVLFGLWFLFANASENLNRLGMTFGFDFLQVT 79

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF I   ++PY    SY    LVG VNT  L+F  ++  T+IGT+VG  RLS N LV+ 
Sbjct: 80  AGFNISWSLIPYDPGMSYWRVFLVGIVNTLILSFCVIVVGTLIGTVVGILRLSDNPLVSQ 139

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + R YVEV RN+P L+ I F +  V S LP P  S  L   +FLNNRGL   T+     +
Sbjct: 140 LARWYVEVVRNVPLLIQIIFWFTVVFSTLPAPRQSYHLGEWLFLNNRGLYVMTMESTL-S 198

Query: 188 KIFVFSFVLGIVLSLF-ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             ++ +  + ++ +L+   R S+ ++  +G      YI   +   +    +         
Sbjct: 199 WGWIVALGVALIAALYGLFRWSKPYYTLSGSRSTGFYIGLAVWALVACWAIWTFLNSTSL 258

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L  FNF GG+ +   F + ++A++ Y +A IAE VR+G+ ++ RGQ EAA  +G +
Sbjct: 259 SVPTLQGFNFSGGAFLPASFGAAFVAMTVYRSAAIAETVRAGMQSIDRGQHEAAFTIGFS 318

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
             ++ RL+L+PQA+RSIIPP+T+ +L   K+SSLAVA+GF +LVSV   T +NQTG+AIE
Sbjct: 319 RVQSLRLILIPQAIRSIIPPMTNSWLAATKDSSLAVAIGFPELVSVFMQTSMNQTGRAIE 378

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II + M  Y+ +S++I+  +N+ N  +  K +
Sbjct: 379 IIFMVMGFYIFISLLISYLLNKYNDSVQYKVR 410


>gi|307152420|ref|YP_003887804.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7822]
 gi|306982648|gb|ADN14529.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7822]
          Length = 390

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 144/389 (37%), Positives = 224/389 (57%), Gaps = 8/389 (2%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS---ERAGF 70
            +  F  D R  ++  Q ++ L++  I  +  NN+ NN ++ +L  G  F+      AGF
Sbjct: 5   EKTPFWRDTRFLSLLGQTLVVLVVLAIGFFLANNLVNNFQRLHLRFGFDFIFDSRRPAGF 64

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I    +PY        A+LVG +N+  +   G+I A+I+G ++G  RLS+N LV +I  
Sbjct: 65  SIGNAPIPYKPTDPIIVALLVGLINSLKVLVFGIILASILGVILGISRLSSNWLVRYIAT 124

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVE+FRN P L+ +FF Y +V    P  ++ ++L  G+FL+NRGL+ P  + +  + +F
Sbjct: 125 VYVEIFRNTPLLLQLFFWYTAVFLKFPKINNPLILFEGIFLSNRGLAIPWPSGNFLSWLF 184

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
               +L +V S+           + GK   +  +    I       L AL   L + KP 
Sbjct: 185 AGFLLLSVVSSVKLWHWHTQLRVQQGKTRSIFVVIFSAIIIAS---LWALMIGLDWQKPQ 241

Query: 251 LGQFNFI--GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           L     +   G T+SPEF S+ + L+ YTAAFIAE+VR+G+ +V +GQ EAA+ALGL   
Sbjct: 242 LNAKLGLIEHGLTLSPEFASILMGLTFYTAAFIAEVVRAGIQSVDKGQREAALALGLKPS 301

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              +LV+ PQA+R IIPPLTS++LNL KNSSLA A  + D+ +V  T+  ++G+A+E+IL
Sbjct: 302 LVMQLVIFPQALRVIIPPLTSEFLNLAKNSSLASATLYKDIYAVSYTVAEKSGRAVEMIL 361

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + M  YL ++++I+  MN  N  + LKE+
Sbjct: 362 VVMGTYLIINLVISSSMNTFNRWVQLKER 390


>gi|33596741|ref|NP_884384.1| ABC transporter transmembrane protein [Bordetella parapertussis
           12822]
 gi|33600509|ref|NP_888069.1| ABC transporter transmembrane protein [Bordetella bronchiseptica
           RB50]
 gi|33568108|emb|CAE32021.1| Putative ABC transport system, integral membrane protein
           [Bordetella bronchiseptica RB50]
 gi|33573442|emb|CAE37427.1| Putative ABC transport system, integral membrane protein
           [Bordetella parapertussis]
          Length = 403

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 165/395 (41%), Positives = 243/395 (61%), Gaps = 2/395 (0%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
            R         +  L+D +V  + +Q++LA LL  +    V+N   N++ +N++ G GFL
Sbjct: 9   KRPDKRAARPLLSRLHDRKVRGVLLQLLLAALLLWLGYVGVSNAVANLKAANIASGFGFL 68

Query: 65  SERAGFEIDQGIVPYT-SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           +  AGF+I+Q ++PY+ + S+Y  A +VG +NT  +A  G++ AT+IG LVG  RLS+N 
Sbjct: 69  ASTAGFDINQSLIPYSGATSTYGDAFVVGLLNTLLVAAIGIVLATLIGFLVGIARLSSNV 128

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           +VA +  +YVE  RN+P L+ IFF Y +VL  LP    S+ L   +FLNNRGL  P + +
Sbjct: 129 VVAAVATLYVETLRNLPLLLQIFFWYSAVLVALPAARESLHLADWVFLNNRGLYLPFVNI 188

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           D  A        L ++    A RL+     + G++ P   ++  L   +    L+A+   
Sbjct: 189 DGPAWPLWLVLALAVLGYALARRLALRARLRGGRSYPARTMALGLFVVVLGGGLLAVDPA 248

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              D P    F F GG  + PE ++L +ALS YTAAFIAEIVR+G+ AV +GQ EAA+AL
Sbjct: 249 ASLDLPRFRGFGFAGGLRIYPEMVALVVALSTYTAAFIAEIVRAGIGAVGQGQREAAVAL 308

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL+ R    LV+ PQA+R IIPPLTSQ+LNL KNSSLAVA+ + DLV V  GT++NQTG+
Sbjct: 309 GLSPRHTQSLVITPQALRVIIPPLTSQFLNLTKNSSLAVAIAYPDLVQVFMGTVLNQTGR 368

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+EI+ I M +YL++S++ +  M   N ++ L E+
Sbjct: 369 AVEIVSITMAVYLAISLVTSALMGVYNRRVRLVER 403


>gi|218510921|ref|ZP_03508799.1| binding-protein dependent transport system inner membrane protein
           [Rhizobium etli Brasil 5]
          Length = 409

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 151/397 (38%), Positives = 220/397 (55%), Gaps = 9/397 (2%)

Query: 5   ARKTVTRYFSRMKFLYDMRVH---NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
           +RK     FS+  FL  +R     +  +Q +    +  +  +  NNV   M++  L LG 
Sbjct: 17  SRKRYEPGFSKPGFLASVRQWLGPSPFLQAVFLFAVLAVCWYLGNNVVETMQRLGLRLGF 76

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            FLS+RA FEI + ++ Y+S  +YA A+L G +NT  +AF   + AT+ G ++G  RLS 
Sbjct: 77  AFLSQRANFEIGESLITYSSSDTYARALLAGLLNTINVAFFACVIATVCGVMLGVARLSG 136

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           N ++A + R YVE+FRN P L+ +F    ++   LP P  ++    G FL+NRG+  P L
Sbjct: 137 NLVLASVVRAYVEIFRNTPLLLQLFLW-SAIFHSLPAPRRALEFSGGFFLSNRGIFIPRL 195

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
             D  +  F++  +      +      R F  +   A  +L +S  +       V  A  
Sbjct: 196 IFDGPS-AFIWLPLAAAAAGVTIIIARRLFFGQRFYATRILVLSVAMFAA----VCWATG 250

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             +  + PV G FN  GG +++PEF  L   L    AA IAEIVRSG+ +V  GQ EAA 
Sbjct: 251 VSISAEPPVRGGFNISGGMSLTPEFAGLLTGLVFNAAATIAEIVRSGIQSVGNGQWEAAR 310

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGL      RL++LPQA+R I P +TS YL+L KNSSLAVA+GF DLVSV  T  N TG
Sbjct: 311 ALGLRPGHIMRLIVLPQALRVITPLMTSSYLDLTKNSSLAVAIGFPDLVSVANTTANTTG 370

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           Q +E I I    YL+L++ +++ MN  N +I L+E++
Sbjct: 371 QTLEAITIIAVAYLTLNLAVSVLMNLYNRRIMLREER 407


>gi|126737043|ref|ZP_01752778.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. SK209-2-6]
 gi|126721628|gb|EBA18331.1| binding-protein-dependent transport systems inner membrane
           component [Roseobacter sp. SK209-2-6]
          Length = 395

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 147/396 (37%), Positives = 221/396 (55%), Gaps = 18/396 (4%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            + D R  +++ Q I AL+L +   +  NN+  N+  + L++   FL + +G++I+Q +V
Sbjct: 2   LINDTRYRSLTFQAIAALVLALAIWYLGNNLIQNLRAAGLNISYSFLGDPSGYDINQRLV 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S SS+A A +VG +NT  +AF   I ATI G + G  RLS N L++ I  VYVEVFR
Sbjct: 62  EYDSQSSHARAAIVGILNTVLVAFLACITATIFGVIAGVLRLSNNWLISKIMAVYVEVFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI------VLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           NIP L+ I  ++  + +V+P P           +   +F       +  +          
Sbjct: 122 NIPVLIWIIIIFTIMTAVMPGPREFRGAEPTASMVLDLFAFTNRGVYIPMPWFETGLFAS 181

Query: 192 FSFVLGIVLSLFATRL---------SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                 +VL++ A            +    E+TG     L+I   +      +VL+    
Sbjct: 182 AGMNWVLVLAVLAGSFFVMRKVEQNATKKQEETGIRPNTLFIGLAVWILP--IVLLLFVM 239

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L ++ P L  FNF GG  +    ++L+ ALS YT AFIAE VR+G+ A+ +GQ EAA A
Sbjct: 240 GLTWEVPELKGFNFKGGIKIGGPLIALWFALSIYTGAFIAENVRAGIQAISKGQTEAAAA 299

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTG 361
           LGL   +   LV+LPQA+R IIPPL S +LN+ KNSSLA+AVG+AD+ +  GG  +NQTG
Sbjct: 300 LGLRPGRIMNLVVLPQALRVIIPPLISNFLNITKNSSLAIAVGYADITATLGGITLNQTG 359

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +AIE +L+ M  YL+ S++I++ MN  NA + LKE+
Sbjct: 360 RAIECVLLLMLFYLTASLLISMAMNVYNASVKLKER 395


>gi|300898041|ref|ZP_07116412.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300358260|gb|EFJ74130.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
          Length = 323

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 144/323 (44%), Positives = 207/323 (64%), Gaps = 1/323 (0%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y    +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+
Sbjct: 1   MIDYQQGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEI 60

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRNIPPL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V
Sbjct: 61  FRNIPPLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVV 120

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + IVLS+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FN
Sbjct: 121 MAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 180

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V+
Sbjct: 181 FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 240

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           +PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +Y
Sbjct: 241 IPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 300

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L +S+ I+L MN  N +IA+ E+
Sbjct: 301 LIISLTISLLMNIYNRRIAIVER 323


>gi|330814053|ref|YP_004358292.1| glutamate Aspartate transport system permease protein GltJ
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487148|gb|AEA81553.1| glutamate Aspartate transport system permease protein GltJ
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 398

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 149/381 (39%), Positives = 229/381 (60%), Gaps = 6/381 (1%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            ++     Q ++ LLL +I  +   N   NM    +  G GFL+ +A F+I   ++ + S
Sbjct: 19  PKIGIYFPQFLIILLLGIIISYFSLNASTNMAARGIETGFGFLANKASFDIQFSLIDFDS 78

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + SYA A LVG +NT  ++  G+  AT+IG  VG  RLS+N L + +   Y+E+FRNIP 
Sbjct: 79  NDSYARAYLVGLLNTLLVSGIGIFFATVIGFFVGVTRLSSNILASKVAEAYIEIFRNIPL 138

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ IFF Y ++L +LP  D+S++L   +F N +G+  P    + N   FV+ F+  I+  
Sbjct: 139 LLQIFFWYFAILRLLPSSDNSLILFNFVFANIKGIYVPRFVWE-NLNHFVYGFLFSILAI 197

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG----QFNFI 257
                 S+   EKTG  +P    S  + F +  +V+      L    PVL      +N++
Sbjct: 198 YLFVSFSKKKQEKTGVQVPTFTTSLVIFFTINFIVIYFGNVGLSLSYPVLETNRGLYNYM 257

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG +V PE ++L  +LS YT+ FIAE VR+G++ + +GQ EAA ++GL+  +  +L+++P
Sbjct: 258 GGVSVIPELIALAFSLSLYTSTFIAECVRAGILGIDKGQKEAAASIGLSKGQILKLIVIP 317

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLS 376
           QA+R IIPP+T+QYLNL KNSSLA A+ + D+V V  GT + QTG+AIEI+ I M  YL+
Sbjct: 318 QALRIIIPPVTNQYLNLTKNSSLAAAIAYPDIVLVFAGTALMQTGKAIEIVSITMLTYLT 377

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           LS+ I+L MN  N K ++ E+
Sbjct: 378 LSVSISLLMNWYNKKNSIVER 398


>gi|171058820|ref|YP_001791169.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170776265|gb|ACB34404.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 343

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 137/379 (36%), Positives = 203/379 (53%), Gaps = 55/379 (14%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVP 78
             +     +  Q+++  L+ V+  W V+N   NM    +  G  FL++ AGF+I + ++ 
Sbjct: 20  WSNPATRGLVYQLLMLALVAVVVGWLVHNTLANMALRGIRSGWDFLTQTAGFDIGESLIA 79

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + S   Y  A LVG +NT  +A  G++  T++GT +G GR S N LV  +C  YVE+FRN
Sbjct: 80  FESIDPYWRAFLVGLLNTLRVALIGIVLITLLGTALGVGRYSRNALVRGLCYGYVELFRN 139

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P LV +   Y  ++  LP     +                                   
Sbjct: 140 VPILVQLLIWYLLMVEFLPEAMAPLDWGG------------------------------- 168

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
                     R F  K+G +LP L  S               +    +  P  G F   G
Sbjct: 169 ----------RVFLSKSGLSLPWLAHSA--------------EAGWSWSIPEPGAFVLEG 204

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G T+SPEF+S+ + L+ YT++F+AE+VR+G+ +VPRGQ EAA ++GL+  K  RLV+LPQ
Sbjct: 205 GVTLSPEFLSVLLGLTFYTSSFVAEVVRAGIASVPRGQTEAAHSIGLSRAKTLRLVVLPQ 264

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R IIPPLT+QYLNL KNSSLAV +G+ D+VS+  T +NQTG+A+E I I M +YLS S
Sbjct: 265 ALRVIIPPLTNQYLNLTKNSSLAVVIGYPDVVSIANTALNQTGRAVECIAIIMAVYLSTS 324

Query: 379 IMIALFMNRLNAKIALKEK 397
           +  A  MN  N ++A++E+
Sbjct: 325 LGTAALMNAYNRRVAIRER 343


>gi|255263937|ref|ZP_05343279.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Thalassiobium sp. R2A62]
 gi|255106272|gb|EET48946.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztB [Thalassiobium sp. R2A62]
          Length = 398

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 152/399 (38%), Positives = 220/399 (55%), Gaps = 21/399 (5%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L D R  +++ Q+I A+ L    L+  NN+  N+    LS+   FL   AG++I+Q ++
Sbjct: 2   LLNDTRYRSLTFQVIAAIALAFSILYLANNLARNLADQGLSISFAFLGAPAGYDINQRLI 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            YTS S+   A  VG +NT  +AF   + ATI G L G  RLS N LVA I   YVE+FR
Sbjct: 62  EYTSQSTNLRAAFVGILNTLLVAFLACVTATIFGVLAGVLRLSKNWLVAKIMAFYVEIFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI------VLPFGMFLNNRGLSFPTLTMDTN----- 186
           NIP L+ I  ++  + +VLP P           +  G+        +      T      
Sbjct: 122 NIPVLIWIIIIFTIMTAVLPGPRAFRGDDATASMFLGVSAFTNRGIYIPGPYFTRGFGAA 181

Query: 187 --AKIFVFSFVLGIVLSLF-----ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
               ++ +  VLG++++ F         +    E TG     L  +  + FG   +V +A
Sbjct: 182 ELGAVWDWVLVLGLLVASFFGARAVNARATRIQEATGIRPATLTTNLAIWFGPLIVVALA 241

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L   L F+ P L  FNF GG  V    ++++ ALS YT AFIAE VR+G++AV +GQ EA
Sbjct: 242 LG--LTFEIPELKGFNFKGGIKVGGPLIAIWFALSIYTGAFIAENVRAGILAVSKGQTEA 299

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIIN 358
           A ALG+   +   LV+LPQA+R IIPPL S YLN+ KNSSLA+ VG+AD+ +  GG  +N
Sbjct: 300 AAALGIRPGRIMSLVILPQALRVIIPPLISNYLNITKNSSLAILVGYADVTATLGGITLN 359

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QTG+AIE +L+ M  YL +S++I+  +N  N  + LKE+
Sbjct: 360 QTGRAIECVLLLMLFYLVISLLISGIINIYNNSVKLKER 398


>gi|209885182|ref|YP_002289039.1| general L-amino acid transport system permease protein AapQ
           [Oligotropha carboxidovorans OM5]
 gi|209873378|gb|ACI93174.1| general L-amino acid transport system permease protein AapQ
           [Oligotropha carboxidovorans OM5]
          Length = 401

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 157/374 (41%), Positives = 229/374 (61%), Gaps = 1/374 (0%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
             +  Q++ A LL  +    V N   N++   ++ G GFLS  AGF + Q ++ Y+   S
Sbjct: 27  KGMVGQVVFAALLAWLAYDIVTNAQANLQAQRVASGFGFLSSSAGFGVSQALISYSEADS 86

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y     VG +NT  ++  G++ AT+IG  V   RLS N L+A +   YVEV RN+P L  
Sbjct: 87  YFRVFEVGLLNTLLVSAIGIVFATVIGFAVAIARLSPNWLLARLAAGYVEVIRNLPLLFQ 146

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           + F Y +VL+ LP P  S+ +    FLNNRG   P +  +  A++F+ + V+ I+ SL  
Sbjct: 147 LLFWYLAVLAALPNPRQSLSVFGVAFLNNRGFVVPQMLAEPGARVFMVAIVVAIIASLAM 206

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             ++R    + G+ L +      L+ GLP L ++     + FD PVL  FNF GG  ++ 
Sbjct: 207 VIVARRRLYRRGERLRIWPFVLVLLIGLPLLSIVLFGAPVRFDMPVLRGFNFAGGMRITT 266

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E ++L I+LS YTAAFIAE+VR GL+AVP+GQ EA  +LGL+     RLV++PQAMR I+
Sbjct: 267 ELVALAISLSTYTAAFIAEVVRGGLLAVPKGQTEAGASLGLSRGAILRLVIIPQAMRVIL 326

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           PPLT+QYLNL+KNSSLAVA+G+ DL SV  GT ++QTGQA+EII + M +YL++S++ + 
Sbjct: 327 PPLTNQYLNLIKNSSLAVAIGYPDLFSVFAGTALSQTGQAVEIIAMTMAVYLAISLVTSA 386

Query: 384 FMNRLNAKIALKEK 397
            MN    +I    +
Sbjct: 387 IMNFYGWRIDRSLR 400


>gi|242280379|ref|YP_002992508.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123273|gb|ACS80969.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 459

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 149/322 (46%), Positives = 206/322 (63%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  YT  SSY  A+L G  NT  +   G + +TI+G LV  GRLS N L++ ICR YVE+
Sbjct: 138 IAHYTESSSYFMALLTGLGNTLKVTVIGCVASTILGLLVALGRLSPNWLLSNICRWYVEL 197

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN+P L+ +FF Y  VL  LP    SI L   + LN RGL  P L     A IF  + V
Sbjct: 198 NRNLPVLLQLFFWYFIVLQQLPNVRKSIDLGGWLILNKRGLYMPALVPQQGAWIFCAAVV 257

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G        R ++   ++TGK++  L+ S  ++ GLP +  +        D PVL  FN
Sbjct: 258 VGFAAIWIIRRRAKRILDETGKSVKTLFPSLAVLIGLPAVAWLLGGQPFTLDFPVLKGFN 317

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG+ ++PEF +L + L+ Y +AF AEI+RSG+ AV +GQ EAA AL +  R+  R+V+
Sbjct: 318 FKGGTGLTPEFTALVVGLTVYVSAFNAEIIRSGIEAVSKGQREAARALAMNERQVMRIVI 377

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR I+PP+TS+YL + KNSSLAVA+G+ + VSVGGTI+NQ+GQA+EI+ IWM +YL
Sbjct: 378 LPQAMRIIVPPMTSEYLAIAKNSSLAVAIGYPEFVSVGGTILNQSGQAVEIVGIWMGVYL 437

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            +S+ I+  MN  N+K+AL E+
Sbjct: 438 CISLFISFGMNIYNSKVALVER 459


>gi|119489533|ref|ZP_01622294.1| ABC-type permease for basic amino acids and glutamine [Lyngbya sp.
           PCC 8106]
 gi|119454612|gb|EAW35759.1| ABC-type permease for basic amino acids and glutamine [Lyngbya sp.
           PCC 8106]
          Length = 388

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 132/384 (34%), Positives = 211/384 (54%), Gaps = 4/384 (1%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS-LGIGFLSERAGFEID 73
           ++    D R   I+ Q+++ + +  +F+    N+  N++++  +     FL+  AGF I 
Sbjct: 8   KVPLWRDSRFWKIAFQLVILIAVLSLFILLGTNLTRNLQQTGGTVFNFDFLNSTAGFGIG 67

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++PY +  +Y+  +L G +N+  +   G+I  TI+G L G    S N L+  I   YV
Sbjct: 68  ESLIPYQATDNYSRVLLAGLLNSLRVMVLGIILTTILGVLAGVIYFSNNWLLRQITIYYV 127

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+ RN P L+ + F Y   L + P    +  L   ++LN RG+  P  + +     ++  
Sbjct: 128 EIVRNTPLLLQLLFWYGLFLQL-PAIATTAKLFNAIYLNKRGVFLPWPSGNA-VWFWLAV 185

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++  + S+   R       + GK+     I  +++  L  LV+I          P    
Sbjct: 186 LLIAAIASVVIWRWRIKIMVEQGKSGQPQLIILWIMGILAGLVIIFAL-GWQRPIPAENG 244

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
               GG  ++ EF +L + L  YT A+IAEIVRSG+ +VP+GQ EAA +LGL      RL
Sbjct: 245 RTIEGGLRMTIEFTALLVGLVVYTGAYIAEIVRSGIQSVPKGQWEAARSLGLKPGLVMRL 304

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+ PQA+R IIPPL SQYLNL KNSSLA+AV + D+ SV  T  NQ+G+ +E++LI M  
Sbjct: 305 VVFPQALRVIIPPLNSQYLNLAKNSSLAIAVAYPDIYSVANTTFNQSGRVVEVMLIIMAT 364

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YLS++++I+L MN LN  + L+E+
Sbjct: 365 YLSINLLISLTMNGLNKAVQLRER 388


>gi|218437711|ref|YP_002376040.1| polar amino acid ABC transporter inner membrane protein [Cyanothece
           sp. PCC 7424]
 gi|218170439|gb|ACK69172.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7424]
          Length = 390

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 143/392 (36%), Positives = 219/392 (55%), Gaps = 8/392 (2%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLS---ER 67
               ++ F  D R+ N+  QI + L+L  I ++  NN+  N ++  L+ G  F+      
Sbjct: 2   TASEKIPFWRDTRILNLLGQIFVILVLVGILIFLGNNLIINFQRLRLNFGFEFIFDTRRP 61

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF I    +PY        A+LVG +N+  +  SG+I A I+G +VG GRLS+N LV  
Sbjct: 62  AGFNIGNSPIPYQPTDPVIIALLVGLINSLRVMISGIILAAILGIMVGLGRLSSNWLVRQ 121

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I  VYVE+FRN P L+ +FF Y +V    P  D+ ++L   + L+NRG++ P  +     
Sbjct: 122 IATVYVEIFRNTPLLLQLFFWYSAVFLKFPKIDNPLILFNSILLSNRGMAIPWPSGKLQT 181

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            + +    +  +L+    R       + G++     +    I     L L+     L + 
Sbjct: 182 WLSLILLFINAILAFLVWRTRTQRRIQQGESGNRFLVILSGIGITSLLALMI---GLDWQ 238

Query: 248 KPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           KP+L         G  +SPEF SL I L+ YTAAFIAE+VR+G+ +V +GQ EAA ALGL
Sbjct: 239 KPLLNIELGRIEQGLILSPEFASLLIGLTVYTAAFIAEVVRAGIQSVNQGQWEAAKALGL 298

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
                 +LV+ PQA+R +IPPLTS++LNL KNSSLA A  + D+ +V  T+  +TG+A+E
Sbjct: 299 KPSLVMQLVIFPQALRVMIPPLTSEFLNLAKNSSLASATLYKDIFAVSYTVAEKTGRAVE 358

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++L+ M  YL ++++I+  MN  N  + LKE+
Sbjct: 359 MMLVVMSTYLIINLIISSGMNTFNHLVQLKER 390


>gi|254463434|ref|ZP_05076850.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacterales bacterium HTCC2083]
 gi|206680023|gb|EDZ44510.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 394

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 145/395 (36%), Positives = 217/395 (54%), Gaps = 17/395 (4%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            + D R  + + Q I  + L V F +  +N+  N++ + L++   FL E AG++I+Q ++
Sbjct: 2   LINDTRYRSYTFQFIALIALIVAFGYLGSNLIANLKAAGLNISYRFLGEPAGYDINQRLI 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            YTS SS+  A +VG +NT  +A      ATIIG +VG  RLS N +V  +  VYVE+FR
Sbjct: 62  EYTSQSSHMRAAVVGMLNTLLVAVVACFLATIIGVIVGVLRLSNNWIVNKLMGVYVEIFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH---------SIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N+P L+ I  +    ++VLP P             +  F           PT T    A 
Sbjct: 122 NVPVLIWILIIMAVFVAVLPQPREFRGDDATASMFLDLFAFTGRGFYFPRPTFTAGWAAG 181

Query: 189 IFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              +  ++G++++ F         +    E+TG+     Y +  +      +  + +   
Sbjct: 182 STGYLVIIGLLIASFFGARALAKSATVTQERTGERPKTWYFTLAIWLVPVLVACVVMG-- 239

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L ++ P L  FNF GG      +++L  ALS YTAAFIAE VR+G++A+  GQ EAA +L
Sbjct: 240 LTWELPALKGFNFKGGIYARNSYIALTFALSIYTAAFIAENVRAGILAISTGQTEAAASL 299

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQ 362
           GL   +   LV+LPQA+R IIPPL SQYLN+ KNSSLA+AVG+ D+    GG  +NQTG+
Sbjct: 300 GLRPGRIMNLVILPQALRVIIPPLISQYLNITKNSSLAIAVGYMDVTGTLGGITLNQTGR 359

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           AIE +L+ M  YL +S+ I+  MN  N  + LKE+
Sbjct: 360 AIETVLLLMAFYLIISLSISAIMNVYNNSVKLKER 394


>gi|126724900|ref|ZP_01740743.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2150]
 gi|126706064|gb|EBA05154.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacterales bacterium HTCC2150]
          Length = 391

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 148/390 (37%), Positives = 218/390 (55%), Gaps = 10/390 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            + D R  +++ Q I A+ L +I  +  NNV  N+ K  L++   FL  +AG++I+Q ++
Sbjct: 2   LINDTRYRSLTFQAIAAIALALIIFYLANNVATNLAKLGLNIDFSFLGAQAGYDINQTLI 61

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PY+S S+  +A  VG +NT  +AF   I ATI G L G  RLS N LV  +   YVE+FR
Sbjct: 62  PYSSQSTNLSAAFVGILNTLLVAFLACITATIFGVLAGVLRLSNNWLVRKLMSFYVEIFR 121

Query: 138 NIPPLVVIFFLYKSVLSVLPIP-------DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           NIP L+ I  +Y  +   L  P           +        NRG+  P       + + 
Sbjct: 122 NIPVLIWILMIYGVMTISLSGPKAYLGAEPSKELFLGLFAFTNRGIYVPAPIWGPGSMVV 181

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-- 248
           V +F+L ++  +   R + +   +TGK LP    +  ++      +   +   +  D   
Sbjct: 182 VVTFILSVIAVIAYRRYATNLLYRTGKLLPTGLPTIAILLIPTIFMFFVMGQPIGLDLPD 241

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P+  +FN  GG  +    ++++ ALS YT AFIAE VR+G+ AV +GQ EAA ALGL   
Sbjct: 242 PLANRFNLRGGLQIGAPLIAIWFALSIYTGAFIAENVRAGIQAVSKGQTEAAAALGLRSA 301

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
           +   LV+LPQA+R IIPPL SQYLN+ KNSSLA+ VG+AD+ +  GG  +NQTG+AIE I
Sbjct: 302 RIMSLVVLPQALRVIIPPLISQYLNITKNSSLAILVGYADVTATLGGITLNQTGRAIECI 361

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L+ M  YL +S+ I+  +N  N  I LKE+
Sbjct: 362 LLLMLFYLIISLTISSVINVYNNSIKLKER 391


>gi|331007194|ref|ZP_08330405.1| Amino acid ABC transporter, permease protein [gamma proteobacterium
           IMCC1989]
 gi|330418989|gb|EGG93444.1| Amino acid ABC transporter, permease protein [gamma proteobacterium
           IMCC1989]
          Length = 348

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 140/348 (40%), Positives = 216/348 (62%), Gaps = 1/348 (0%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111
           ME   +  G GFL+E AGF+I   +VPY +  +Y    +VG +NT  ++  G+  +TI+G
Sbjct: 1   MEALGIKSGYGFLTETAGFDILMSLVPYDATYTYGRTFVVGLLNTILVSIVGIFFSTILG 60

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            ++G    S N L+  +  VYV+ FRNIP L+ +FF Y +VL+ LP    SI +    FL
Sbjct: 61  FIIGIAYFSKNWLLHKMSIVYVQTFRNIPLLLQVFFWYFAVLAALPGARDSINIGEAFFL 120

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N RGL FP +  ++ +     +  + ++ ++   + ++   ++TG+  P+   +  LI G
Sbjct: 121 NVRGLYFPAIVGESGSGFVHAALAIAVIAAIIIKKWAKKRQDETGQQFPVFITAIGLIVG 180

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +  + L      D P L  FNF GG TV PE M+L +ALS Y AAFIAE VR+G+ +
Sbjct: 181 LPLITNLILGTPFILDYPSLQGFNFAGGVTVIPELMALTLALSVYGAAFIAEAVRAGIQS 240

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ EAA ++ L  ++   L+++PQAMR IIP L S+Y +L+KNS+LA A+G+ DL +
Sbjct: 241 VPHGQTEAARSIALPEKRIMSLIIVPQAMRVIIPLLNSEYQSLIKNSTLATAIGYPDLFT 300

Query: 352 V-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V  GT +NQTGQAIEI+ + M  Y ++++++++ MN +N  +AL E+K
Sbjct: 301 VFVGTTLNQTGQAIEIVFMTMAAYFAINMLVSVIMNFMNGGVALTERK 348


>gi|258545567|ref|ZP_05705801.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
 gi|258519267|gb|EEV88126.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
          Length = 387

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 154/387 (39%), Positives = 227/387 (58%), Gaps = 7/387 (1%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
             Y         Q +L +L+ V+      N   NM    L     FL   AGF + Q ++
Sbjct: 1   MWYAASFRRALFQFLLLVLIVVVAAMLWRNTAANMAARGLVFSFAFLDNPAGFAVSQHLL 60

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PY    SY    ++G +NT  ++   ++ AT++G +VG  R+S N L+  +  VYVEVFR
Sbjct: 61  PYQESDSYGWLFVIGLLNTLLVSLLAIVAATLVGVVVGVLRVSRNWLLRKLAAVYVEVFR 120

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG------MFLNNRGLSFPTLTMDTNAKIFV 191
           NIP L+ +FF Y +VL+VLP P  S +            L+NRGLS       +  +  +
Sbjct: 121 NIPLLLQLFFWYFAVLAVLPAPRSSTLRLGCDEAGCLAVLSNRGLSLIAPLWQSALQTAL 180

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
               +G+VL++   R +R    ++G+ L L +    LI  LP      L       +P+L
Sbjct: 181 ALCAVGVVLAVLLARWNRRRQAQSGQVLRLWWAYALLIVALPLAAFALLVEPSQLSRPLL 240

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             FNF GG T+ PE M+L++ALS Y+A++IAE VRSG+ +VPRGQ EAA ALGL   +  
Sbjct: 241 QGFNFRGGVTLLPELMALWLALSLYSASYIAEYVRSGIASVPRGQYEAAEALGLPPARVM 300

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIW 370
           RLV+LPQA+R ++PP+TSQ+LN++KNSSLA A+ + DLVSV  GT +NQTG+A+EII + 
Sbjct: 301 RLVILPQALRVMVPPMTSQFLNIVKNSSLATAIAYPDLVSVFTGTALNQTGRAVEIIGLT 360

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M +YL++S++I+L M   N +I + E+
Sbjct: 361 MAVYLAISLLISLAMGVYNRRIRIVER 387


>gi|87120914|ref|ZP_01076806.1| general amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
 gi|86163752|gb|EAQ65025.1| general amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
          Length = 383

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 129/381 (33%), Positives = 219/381 (57%), Gaps = 2/381 (0%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L D R   I  Q++  ++++    +   N+  N+ +  +S G  FL + AG++I   ++
Sbjct: 4   ILRDERKRAIFDQVLFLVIVSAFIYYLSANLIENLNRLGISTGFSFLWQEAGYQIGGALI 63

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    SYA A +VG +NT    F  ++ A+I+G ++G  R+S N L+    R  +EV R
Sbjct: 64  DFDDTDSYALAHIVGLLNTLLATFLIIVSASILGFIIGILRMSPNPLMTNSIRYVIEVIR 123

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NIP LV I   +   L + P+   S  +   +F++NRG+  P    ++     +F F+  
Sbjct: 124 NIPSLVHIVIWFSLALHLPPV-RQSFDIYNTVFISNRGIYLPDPNFESGMWGVLFLFICL 182

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +  + F  R ++    +TGK       +T +I+G      +     + +  P L  F+F 
Sbjct: 183 LAYAFFRKRKAQQLMRETGKYQATFLSNTLIIWGGTICAYLLFGLPITWQAPTLSGFDFD 242

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG T++PE  +++IALS Y ++ +AE+VR G+ +V +GQ EAA ALG+ +    ++V++P
Sbjct: 243 GGITIAPELFAIWIALSIYFSSHVAELVRGGVQSVSKGQFEAASALGVRYSITMKMVVIP 302

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIYLS 376
           QAMR I+PPLT+ Y N+LK +SL VA+G+A++ +  GGT +N TGQAIE IL+ M  Y  
Sbjct: 303 QAMRVIVPPLTNVYQNILKTTSLGVAIGYAEMTATTGGTTLNLTGQAIECILLMMVSYGI 362

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           +S++IA  M+++N  +A+ E+
Sbjct: 363 ISLIIAAIMDQINKHVAIVER 383


>gi|167041375|gb|ABZ06128.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_005K23]
          Length = 399

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 166/387 (42%), Positives = 231/387 (59%), Gaps = 8/387 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI- 76
           F    ++     Q ++   +  IF +   N   NM+   +  G+ FL E + F+I     
Sbjct: 14  FYARPKLKYYLPQALVVFFIVFIFGYFSYNAQVNMDNRGIDFGLRFLGEESSFDIQFTPF 73

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           V Y    SYATA LVG +NT  ++  G+  ATI+G +VG  RLS N L+A +  +YVE+F
Sbjct: 74  VEYDGTKSYATAYLVGLINTIIVSLVGIFFATILGVVVGISRLSPNYLIAKMSEIYVEIF 133

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN+P L+ +FF Y + L  LP+P  +I      FL+ +G   P   + TN  +F  S + 
Sbjct: 134 RNVPLLLQLFFWYFTALRALPLPKDAISFFDVSFLSIKGFYVP-RFIWTNGSLFFVSIIA 192

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
            I++  F  R  +   E+TGK  P  +IS  +I  LP L  +     L F+ P L Q   
Sbjct: 193 SIIVIFFLLRFFKKKQEQTGKQYPKFFISLTIITVLPFLTFLIGGVSLDFEYPELKQLSK 252

Query: 254 --FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             +NF GG ++ PE M+L +ALS YTA FIAE VR+G+  + RGQ EAA ++GLT  +A 
Sbjct: 253 TIYNFKGGISIIPELMALALALSLYTATFIAECVRAGIEGISRGQKEAAASIGLTPGQAL 312

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIW 370
           +LV++PQA+R IIPP T+QYLNL KNSSLA A+ + D+V V  GT + QTG+AIEII I 
Sbjct: 313 KLVIMPQALRIIIPPTTNQYLNLTKNSSLAAAIAYPDIVLVFAGTALMQTGRAIEIISIT 372

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
           M  YL+LSI I++FMN  N KIA+KEK
Sbjct: 373 MLTYLTLSISISIFMNWYNKKIAIKEK 399


>gi|302339787|ref|YP_003804993.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636972|gb|ADK82399.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 389

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 140/371 (37%), Positives = 222/371 (59%), Gaps = 5/371 (1%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            +  +I++Q  + + L  IF +   N   N+   N+ +G GF+ E AGF I Q ++ YT 
Sbjct: 4   TKTRSITIQTTIIIALIAIFTFFGYNYIRNITSRNIGIGFGFMHETAGFSISQTLISYTE 63

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++    ++G +NT   +  G++ AT++G L+G  RLS NKL+  +  VYVEV RNIPP
Sbjct: 64  SDTFGRTFVIGLLNTLVASIIGIVLATLLGFLIGLMRLSKNKLIHNVAVVYVEVLRNIPP 123

Query: 142 LVVIFFLYK-SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           L+ + F Y+   L+VLP    S  L   +++N RG++ P+    T+A  F   F + IV 
Sbjct: 124 LLHVLFWYQVVFLNVLPPFKESFKLGNWLYINVRGITIPSFIPQTSATTFRILFFVSIV- 182

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           ++F     +      G    L  +   ++  L     IA  +Q+    P + +F F  G+
Sbjct: 183 AIFYIGYVKKKMVLRGVHKKLWPLQLAILLALVLFAAIAKPFQI--VLPEITKFKFSSGT 240

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           T+ PE  S+ +AL  YT+ +I+E VRS +IAVP+GQ+EAA +LG    +  +L+++PQAM
Sbjct: 241 TIRPELFSVVVALGTYTSTYISEAVRSSIIAVPKGQLEAAKSLGFNRYRRLQLIIIPQAM 300

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSI 379
           R++IPP+T+QYLNL+KN+SL +AV + DL SV  GT +NQTG+A+E++ + M  YLS+S+
Sbjct: 301 RTMIPPVTNQYLNLIKNTSLGMAVAYPDLTSVFAGTTLNQTGRALEVMSLVMLTYLSISL 360

Query: 380 MIALFMNRLNA 390
           + +L MN  N 
Sbjct: 361 VTSLLMNWYNR 371


>gi|81299058|ref|YP_399266.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus elongatus PCC 7942]
 gi|81167939|gb|ABB56279.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus elongatus PCC 7942]
          Length = 377

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 128/378 (33%), Positives = 204/378 (53%), Gaps = 14/378 (3%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
            F  D R+     Q+++ L++ +  +W V+N+  N+ +  LSL   +L + AGF I +  
Sbjct: 10  PFWRDERLWRWVWQLLVLLVVGLGAIWLVDNLVYNLSQRGLSLSFDWLDQSAGFNIGESA 69

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y +  SYA A++VG VN+  +   G+I  T+IGTL G    S N L+  + R YV V 
Sbjct: 70  IAYRTADSYARALVVGLVNSLRVIAIGLILTTVIGTLAGVAAFSENWLLRQLSRGYVAVV 129

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN P L+ +   Y  +L  LP           ++L+ +G+  P         +     +L
Sbjct: 130 RNTPLLLQLIVWYFPILLSLPAAQQPWHWLGSLYLSKQGIYLPWPQTPGWLVV-----IL 184

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            I L LF + L++   +++ +    LY +  ++  L  L  ++   QL   +        
Sbjct: 185 AIALVLFVSWLAQR--QRSPRDWRWLYGAIAVVTVLMLLTQLSWPQQLQPGQ-------I 235

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  +S EF +L + L  YT AFI EI+R G+++VP GQ EAA ALGLT  +    +++
Sbjct: 236 RGGLRLSLEFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVV 295

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R I+P L SQY+   KNSSLA+AVG+ DL +   T +NQTG+ +E+ LI M  YL+
Sbjct: 296 PQALRVIVPSLNSQYVGFAKNSSLAIAVGYPDLYATAQTTLNQTGRPVEVFLILMLTYLA 355

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++ +I+  MN L  ++  
Sbjct: 356 INAVISAGMNGLQQRLQR 373


>gi|260577145|ref|ZP_05845122.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259020619|gb|EEW23938.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 425

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 154/424 (36%), Positives = 227/424 (53%), Gaps = 33/424 (7%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A       F     +YD R   I++Q+I+ +L+ +   W V+N   N+   +  +  GFL
Sbjct: 4   ASDAPKGGFRPSMLIYDTRYRAITIQVIVLILVLLCVSWLVHNTMVNLAAKDKDINFGFL 63

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
             RAG++IDQ ++PYT+DSS+  A +VG +NT  +A    + AT+IG  VG  RLS N L
Sbjct: 64  WNRAGYDIDQQLIPYTNDSSHGRAAVVGLLNTLVVAGLACVLATVIGVFVGILRLSKNWL 123

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF----------------- 167
           V  +  VY+EVFRN+P L+ IF     +   +P P    V                    
Sbjct: 124 VGRLMTVYIEVFRNVPVLLWIFVAATILSETMPEPKDFKVTDAMIAAGQAPKAAMLFDGA 183

Query: 168 ------GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-------FATRLSRHFHEK 214
                 G  +    LS P  ++D       FSF+  + + +          R +R   E 
Sbjct: 184 VALTNRGTNIPAPLLSRPLGSLDLGLITLNFSFLAMLAVIIGSVLVHRLLLRRARAVQEA 243

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           TG      + S  ++      +L AL +  H D PV   FNF GG  ++  F +L +ALS
Sbjct: 244 TGVRPATWWKSLIVLVVPFVALLFALGF--HLDYPVFKGFNFKGGINLAHSFTALLLALS 301

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            Y+A +IAE VR+G++AV  GQ EAA ALGL   + TRL++LPQA+R I+PPL SQYL++
Sbjct: 302 LYSATYIAENVRAGVMAVSHGQTEAAFALGLRPSRTTRLIILPQALRVIVPPLISQYLSI 361

Query: 335 LKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            KN+SL +AV + DL    GG  +NQTG+ +E +L+ M IYL +S++I+  MN  N+ + 
Sbjct: 362 TKNTSLGIAVSYLDLRGTLGGITLNQTGRELECMLLMMLIYLIISLIISAVMNVYNSSVK 421

Query: 394 LKEK 397
           LKE+
Sbjct: 422 LKER 425


>gi|56751275|ref|YP_171976.1| basic amino acids and glutamine ABC transporter permease
           [Synechococcus elongatus PCC 6301]
 gi|56686234|dbj|BAD79456.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus elongatus PCC 6301]
          Length = 379

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 128/378 (33%), Positives = 204/378 (53%), Gaps = 14/378 (3%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
            F  D R+     Q+++ L++ +  +W V+N+  N+ +  LSL   +L + AGF I +  
Sbjct: 12  PFWRDERLWRWVWQLLVLLVVGLGAIWLVDNLVYNLSQRGLSLSFDWLDQSAGFNIGESA 71

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y +  SYA A++VG VN+  +   G+I  T+IGTL G    S N L+  + R YV V 
Sbjct: 72  IAYRTADSYARALVVGLVNSLRVIAIGLILTTVIGTLAGVAAFSENWLLRQLSRGYVAVV 131

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN P L+ +   Y  +L  LP           ++L+ +G+  P         +     +L
Sbjct: 132 RNTPLLLQLIVWYFPILLSLPAAQQPWHWLGSLYLSKQGIYLPWPQTPGWLVV-----IL 186

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            I L LF + L++   +++ +    LY +  ++  L  L  ++   QL   +        
Sbjct: 187 AIALVLFVSWLAQR--QRSPRDWRWLYGAIAVVTVLMLLTQLSWPQQLQPGQ-------I 237

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            GG  +S EF +L + L  YT AFI EI+R G+++VP GQ EAA ALGLT  +    +++
Sbjct: 238 RGGLRLSLEFTALLLGLVAYTGAFITEIIRGGILSVPAGQWEAAAALGLTRSQTLWQIVV 297

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R I+P L SQY+   KNSSLA+AVG+ DL +   T +NQTG+ +E+ LI M  YL+
Sbjct: 298 PQALRVIVPSLNSQYVGFAKNSSLAIAVGYPDLYATAQTTLNQTGRPVEVFLILMLTYLA 357

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++ +I+  MN L  ++  
Sbjct: 358 INAVISAGMNGLQQRLQR 375


>gi|163742835|ref|ZP_02150219.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
 gi|161383799|gb|EDQ08184.1| predicted amino-acid transporter subunit [Phaeobacter gallaeciensis
           2.10]
          Length = 361

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 127/361 (35%), Positives = 208/361 (57%), Gaps = 3/361 (0%)

Query: 40  IFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWL 99
           +  +  +NV  N++   L+ G GFL   A F+I   +VPY    SYA   ++G  NT  +
Sbjct: 1   MGWYLYDNVSRNLQNLGLASGFGFLDIEAPFDISWSVVPYEPGDSYARVYVIGITNTLIV 60

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A   +  +T +G L+G  RLS N L++ +  VYVEV RN P L+ + F + +V S+LP P
Sbjct: 61  AAMAIAASTGLGFLIGIARLSRNWLISRLASVYVEVVRNTPALIQVLFWFLAVFSILPRP 120

Query: 160 DHSIVLPFG--MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
              + +     + +NNRG+ FP         + + +  + +V ++     +R     TG+
Sbjct: 121 KDGVDVAGLGILQVNNRGIYFPRALPQDGFNVTLLAIAIAVVAAVVLGIWARRRRILTGQ 180

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             P+  +   ++   P  V +     L+++ PVL  FN  GG +  P   ++ ++LS Y 
Sbjct: 181 RFPVALVMPAILVLFPATVFVLTGAPLNWEIPVLKGFNLTGGISFPPAMCAVVLSLSIYH 240

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+I E VR+G+++V  GQ EAA +LG+    + R+++LPQA+R+I+P L S ++N +KN
Sbjct: 241 AAYIGEAVRAGIMSVSPGQGEAAFSLGIKSSWSMRMIVLPQALRAIVPQLISNWMNAVKN 300

Query: 338 SSLAVAVGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SLAVA+GF DLV++   T +NQ G A+EI+ + M  Y S+SI I+L +N  N ++ LKE
Sbjct: 301 TSLAVAIGFPDLVALFLQTSLNQVGYAVEIVAMVMIFYCSVSITISLLLNYYNKRVQLKE 360

Query: 397 K 397
           +
Sbjct: 361 R 361


>gi|83592119|ref|YP_425871.1| binding-protein dependent transport system inner membrane protein
           [Rhodospirillum rubrum ATCC 11170]
 gi|83575033|gb|ABC21584.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodospirillum rubrum ATCC 11170]
          Length = 387

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 143/367 (38%), Positives = 211/367 (57%), Gaps = 2/367 (0%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q+ + L +  +F     N  +N+ +  +++G G+L   A FEI + +V YTS  SYA A+
Sbjct: 23  QLAVLLGVFALFSVLGANTVDNLGRLGITVGFGYLDHPANFEIGESLVAYTSGDSYARAL 82

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            VG +NT  ++  G + AT++G  +G GRLSAN L++   ++YVEV RN P L+ +FF  
Sbjct: 83  GVGILNTALVSIIGCLLATLLGVALGIGRLSANLLISRAVQLYVEVIRNTPLLLQLFFW- 141

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            + +  LP P  +     G+FL NRGL  P L MD  A   +     G +  +    +  
Sbjct: 142 SATIHALPGPRQAFEPLTGVFLTNRGLYMPALAMDGAAVFSLLLLGGGALAGVVRILVHE 201

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             H    +A     +   +   L  ++ + L   +  + P LG FN  GG  +SPEF++L
Sbjct: 202 RRHGPMERA-AKTALLGAVAVLLLGVLALCLGGAVSVEPPRLGGFNITGGWVLSPEFLAL 260

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L    +A I EIVRSG+ AVP GQ EAA +LGLT  +  RLV+LPQA+R +IP +TS
Sbjct: 261 LVGLVINASAVICEIVRSGIEAVPEGQWEAARSLGLTRGRTLRLVVLPQALRVVIPLMTS 320

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            YL+L KNSSLAVA+GF DLVSV  T  NQTG   E I + M +YL++S+ ++  +N  N
Sbjct: 321 SYLSLTKNSSLAVAIGFPDLVSVVNTSANQTGHVFEAIALMMAVYLTISLTVSAALNFYN 380

Query: 390 AKIALKE 396
            +++L  
Sbjct: 381 HRLSLGR 387


>gi|254456261|ref|ZP_05069690.1| amino acid ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083263|gb|EDZ60689.1| amino acid ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
          Length = 351

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 156/352 (44%), Positives = 211/352 (59%), Gaps = 7/352 (1%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG 111
           ME   ++ G GFLS+ + F++   ++ +    SY  A LVG +NT  ++  G+I ATIIG
Sbjct: 1   MENRGITFGYGFLSQESSFDVQFSLIEFDGSHSYFRAYLVGLLNTILVSVIGIIFATIIG 60

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            +VG  RLS N L+     VYVE FRNIP L+ IFF Y + L  LP+P       FG+F 
Sbjct: 61  IVVGIARLSNNYLIERTAAVYVEFFRNIPLLLQIFFWYFAALRALPLP-QDAEPMFGVFF 119

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                 F    +  N  IF++S +  ++  +F    +R   EK G   P+L IS  L+  
Sbjct: 120 LTIKGFFVPAFVWNNLDIFIYSVIAALISIIFIRIYARKKQEKDGVQTPVLSISIGLLLI 179

Query: 232 LPTLVLIALKYQLHFDKPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           LP L  +        + PV+ Q     F + GG  + PE +SL +ALS YTA FIAE VR
Sbjct: 180 LPILSFLFGGVDTSIEVPVIKQLSQSGFTYEGGIKLPPELISLALALSLYTATFIAECVR 239

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  V +GQ EAA ++GLT  +  +LV++PQA+R IIPP T+QYLNL KNSSLA A+ +
Sbjct: 240 AGVQGVSKGQKEAAASIGLTPNQVLKLVVMPQALRIIIPPTTNQYLNLTKNSSLAAAIAY 299

Query: 347 ADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DLV V  GT + QTG+AIEI+ I M  YLSLSI I++FMN  N KIA+KEK
Sbjct: 300 PDLVLVFAGTALMQTGRAIEIVSITMLTYLSLSISISIFMNWYNKKIAIKEK 351


>gi|323165233|gb|EFZ51023.1| general L-amino acid transport system permease protein aapQ
           [Shigella sonnei 53G]
          Length = 307

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 109/292 (37%), Positives = 161/292 (55%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +      F+ + V+ IVL
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVL 195

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FNF GG 
Sbjct: 196 SVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGM 255

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R
Sbjct: 256 VLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLR 307


>gi|303256338|ref|ZP_07342354.1| amino acid ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|330999033|ref|ZP_08322758.1| putative general L-amino acid transport system permease protein
           AapQ [Parasutterella excrementihominis YIT 11859]
 gi|302861067|gb|EFL84142.1| amino acid ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|329575775|gb|EGG57301.1| putative general L-amino acid transport system permease protein
           AapQ [Parasutterella excrementihominis YIT 11859]
          Length = 386

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 133/375 (35%), Positives = 214/375 (57%), Gaps = 6/375 (1%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           +      Q  + ++LT+IF   + N+  N+   N+  G  FL E+AGFEI + ++ ++S 
Sbjct: 18  KRKAFIWQSAILVVLTIIFGSFIFNISANLAARNIHSGFAFLHEQAGFEIGESLISFSST 77

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y  A LVG +NT  ++   +I AT++G ++G  RLS + L+ ++   +VE +RNIP +
Sbjct: 78  EAYFKAFLVGLLNTIKVSVVSIITATVLGVIIGLMRLSKHPLLKFLGAAHVEFYRNIPLI 137

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V +  +Y  +  +LP    ++       L+  GL F     ++ A  + F      V + 
Sbjct: 138 VQLLLIYLIITELLPDSMEAVNFGSWGLLSKAGLQFAVPASNSTACTWSF------VAAG 191

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
            A  L+R    K    L     S      +     +       + KP L  F   GG+++
Sbjct: 192 LAFFLTRPLFLKIYTGLISTVFSLSTALVVGGAAWLCFGIFGGWSKPELQGFAIEGGASL 251

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           SPEF++L+I L+ +T++ IAEI+R+G++AVPRGQ  AA ALG+T  +A   V+ PQA++ 
Sbjct: 252 SPEFLALWIGLTFFTSSSIAEIIRAGVLAVPRGQWHAAEALGMTRLEAISYVIFPQALKL 311

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            IPPL SQY+NL KNSSLAV VG+ DLVS+G + IN  GQA+E+I+I M +YL L+++I+
Sbjct: 312 AIPPLASQYMNLTKNSSLAVVVGYPDLVSIGNSTINLNGQALEVIVIIMSVYLFLNLVIS 371

Query: 383 LFMNRLNAKIALKEK 397
           + MN +N  +    +
Sbjct: 372 VVMNSINRIVIRGSR 386


>gi|297567746|ref|YP_003686717.1| hypothetical protein Mesil_3398 [Meiothermus silvanus DSM 9946]
 gi|296852195|gb|ADH65209.1| hypothetical protein Mesil_3398 [Meiothermus silvanus DSM 9946]
          Length = 378

 Score =  242 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 145/388 (37%), Positives = 218/388 (56%), Gaps = 21/388 (5%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI--- 72
           M+ L D++V  + +Q +       + L+ +      M+   +    GFL + AGF +   
Sbjct: 1   MRVLRDLKVIELLLQTLALGFTLAVLLFLIGTARARMQAQGIPFSFGFLQQEAGFSLSEG 60

Query: 73  -----DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
                 +G+ PY    +Y  A L GF+NT  +   G++ AT++G +VG  RLS++ L   
Sbjct: 61  ITWVPGEGLRPYGPTDTYTQAFLAGFLNTLRVVVGGLVLATLLGFVVGIARLSSHPLARG 120

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +   YVE+ RN P L+ +F  Y +VL  LP P    +  FG  L+ +GL  P   + +  
Sbjct: 121 LALAYVELVRNTPLLLQLFVWYFAVLLKLP-PVEQALRLFGAVLSKQGLFLPWPRLSSVW 179

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
             F   F  G++L      L R ++     A+ L++ +  ++ GLP +V          +
Sbjct: 180 GEFQAFFWGGVLLLAVGLALRRGWYGMV--AMALVWGAGVVLGGLPLVV----------E 227

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PV   F   GG  +SPEF +L   L  YTA+FIAEIVR  ++AVPRGQ EAA ALGL+ 
Sbjct: 228 FPVRTSFGLRGGLELSPEFAALLFGLVVYTASFIAEIVRGAVLAVPRGQWEAARALGLSA 287

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQA+R ++PPL +QYLNL KNSSLAVAVGF DL SV  TI NQ+G+++E I
Sbjct: 288 PQVLRWIILPQAIRIVLPPLANQYLNLTKNSSLAVAVGFPDLFSVYNTIANQSGRSLEGI 347

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +I M +YL +S+ I+  +N  N ++AL+
Sbjct: 348 VIVMGVYLVVSLSISALVNLYNRRVALR 375


>gi|319940741|ref|ZP_08015082.1| hypothetical protein HMPREF9464_00301 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805801|gb|EFW02575.1| hypothetical protein HMPREF9464_00301 [Sutterella wadsworthensis
           3_1_45B]
          Length = 392

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 135/366 (36%), Positives = 209/366 (57%), Gaps = 6/366 (1%)

Query: 27  ISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYA 86
            ++Q +L L+L         NV +N+   N+  G  FL+ RAGFEI + ++ Y+S     
Sbjct: 28  YTLQAVLILILVAFIAVLATNVADNLAAKNIHSGFAFLNHRAGFEIGEQLIAYSSSDPLW 87

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A L G +NT  ++   ++ AT++G +VG  RLS N +V ++   +VE +RN+P LV++ 
Sbjct: 88  KAFLTGLLNTLRISACTIVSATVLGVIVGLMRLSRNGVVRFLGAAHVEAYRNVPLLVLLL 147

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
            LY  V  +LP    +  L   ++L+  GL          A       +  +V+ +F   
Sbjct: 148 ALYLVVTELLPGVRQAWHLGNWIYLSKTGLLCAVPLWGMKA------LLGALVVGVFGGW 201

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+    ++    L        +   L  LV I       +D P   +F+  GG+ ++PEF
Sbjct: 202 LAAKRLQRVQTNLIANMGGFLIFVILSALVWILCGVIGGWDHPTATRFSMRGGAAMTPEF 261

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++L++ L+ +T+A IAEIVR+G+ +V  GQ  AA ALGL   +A   V+ PQAMR I+PP
Sbjct: 262 LTLWLGLTLFTSASIAEIVRAGVESVRPGQWAAAAALGLKSGEAVSYVIFPQAMRLIMPP 321

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L SQ++ L KNSSLAV VG+ DLV+VG T++N TGQA+E+I I M +YL+++I+IA  MN
Sbjct: 322 LASQFMTLTKNSSLAVMVGYPDLVNVGTTVMNVTGQALEVICIIMGVYLTVNIIIAFIMN 381

Query: 387 RLNAKI 392
             NA+I
Sbjct: 382 HFNARI 387


>gi|222102264|ref|YP_002546854.1| ABC-type amino acid transport system, permease component
           [Agrobacterium radiobacter K84]
 gi|221728381|gb|ACM31390.1| ABC-type amino acid transport system, permease component
           [Agrobacterium radiobacter K84]
          Length = 397

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 127/369 (34%), Positives = 188/369 (50%), Gaps = 7/369 (1%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q  + L+   +  +   N+   M +  +  G  FLS+RA FEI + ++ Y+S  SY  A+
Sbjct: 35  QFAILLVCCTVLWYFGINIAATMRRLGIEPGFAFLSQRANFEIGESLIAYSSADSYGRAL 94

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G VNT ++A  G I +T +GT +G  +L+ N ++    R YVE+FRN P L+ +F   
Sbjct: 95  LAGLVNTIYVAVLGCILSTALGTALGIAQLTRNLVLTSFVRSYVEIFRNTPLLLQLFLWS 154

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
               ++    +   +    +      +    L  D        S + G+++ +   RL  
Sbjct: 155 AIFQNLPAARNAIKLAGAFLSNRGLYVPKLLLAGDAPVASTALSVLCGLIVVIALRRLLL 214

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                  +      I+    F L           +  D P  G FN  GG ++SPEF  L
Sbjct: 215 GRPFYATQISLAAIIAASATFWLS-------GGGIDLDLPTKGGFNITGGLSLSPEFAGL 267

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
              L   +AA +AEIVR G+ +V  GQ EAA +LGL      RL++LPQA+R I P +TS
Sbjct: 268 LAGLVFNSAATVAEIVRGGIQSVQNGQWEAARSLGLRPGHIMRLIVLPQALRVITPLMTS 327

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            YL+L KNSSLAVA+GF DLV+V  T  N TGQ +E I I    YLSL++ ++L MN  N
Sbjct: 328 SYLDLTKNSSLAVAIGFPDLVNVANTTANTTGQTLEAIAIIAGAYLSLNLAVSLAMNLFN 387

Query: 390 AKIALKEKK 398
           ++I   E +
Sbjct: 388 SRIVQIEGR 396


>gi|110347224|ref|YP_666042.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283335|gb|ABG61395.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chelativorans sp. BNC1]
          Length = 380

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 133/380 (35%), Positives = 218/380 (57%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
            L D R   I  Q  L   +  +    +     N+E   + LG GFL   A F+I + I+
Sbjct: 1   MLQDARFRAIMAQAALLAGVAALGFVLLTATARNLELRGIPLGFGFLWRPANFQIAETIL 60

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PY+S      A +VG  N+ +++   ++ A++IG  +G GRLS+N LV+ +CRV+VEV R
Sbjct: 61  PYSSSDPNWWAAVVGLSNSLFISVLVILLASVIGLFIGIGRLSSNPLVSGLCRVWVEVAR 120

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N P +V++ F Y     V+P+   +  L  G  ++ RGLS P LT   +           
Sbjct: 121 NTPLVVLLIFNYALWWEVVPLATQAWKLAPGTHISVRGLSMPALTWSASVLAPAAFLATS 180

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
             + + A+  +R    +TG+    +  +        ++ L+A +  +  D P   + NF 
Sbjct: 181 AAILVVASYAARQRQVETGRRPAYVSAAWLFTALGASIFLLAYRDAVSLDIPEFRRANFS 240

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG +++PE  ++ I L+ YTA FI EIVR G++AV +GQ EAA ALGL+  +  RLV++P
Sbjct: 241 GGWSLTPELTTILIGLTFYTAGFIGEIVRGGILAVRKGQWEAATALGLSRGQTYRLVVVP 300

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A+RSI+PPL SQY+N++KNS+LA+ VG+ D ++V  T+IN+T  AIE + I + ++L++
Sbjct: 301 LALRSIVPPLNSQYINVVKNSTLAIVVGYQDFMTVVSTMINKTSHAIEGVAIILGVFLAV 360

Query: 378 SIMIALFMNRLNAKIALKEK 397
           ++ ++  +N  N +IA+ E+
Sbjct: 361 NLALSALLNAYNRRIAIMER 380


>gi|313680183|ref|YP_004057922.1| amino acid ABC transporter membrane protein 1, paat family
           [Oceanithermus profundus DSM 14977]
 gi|313152898|gb|ADR36749.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 392

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 143/392 (36%), Positives = 209/392 (53%), Gaps = 18/392 (4%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
             + F  D R   I  Q +L  ++  + L+       NM   NL    GFL+E A F+I 
Sbjct: 3   EAVPFWKDERKLAILFQALLLTVVVAVLLFLGYMASTNMAARNLQFSFGFLTEPADFQIY 62

Query: 74  QG-----------IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           +G           +  Y        A++ GF+NT  ++F G++  T++G L+G GRLS+N
Sbjct: 63  EGYTVAKEQGRWILRLYHPSDQVWQAMVTGFLNTLRVSFLGIVLTTVLGVLIGIGRLSSN 122

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            LV  +   YVE+ RN P LV + F Y +V  +LP P  +     G+ ++N+G+  P   
Sbjct: 123 WLVNRLSFAYVELIRNTPLLVQMVFWYLAVFLLLP-PIRTAPRFHGVIVSNKGVLIPWPV 181

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            D     F   F  G+ L             +  + L  L  +     GL  +  I    
Sbjct: 182 PDAAWASFAPYFYAGLALWALLWLA--RSLWRPPRWLYWLTPAAAWGLGLYLVGSI---- 235

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L    P +  F   GG  +SPEF S+ +AL  YTA++IAEIVR  + ++P+GQ EA  +
Sbjct: 236 PLELSVPQVQGFRVEGGMQLSPEFSSVLLALVLYTASYIAEIVRGAIQSLPKGQWEAPAS 295

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL++ +  RL++LPQAMR +IPPL +QYLNL KNSSLA+A+ F +++SV  T +NQ G 
Sbjct: 296 LGLSYAQTLRLIILPQAMRIVIPPLGNQYLNLTKNSSLAIAIAFPEIMSVYETTVNQAGH 355

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +IE ILI M  YLSLS+ I+  +N  N K+AL
Sbjct: 356 SIEGILIVMAAYLSLSLFISALINWYNVKVAL 387


>gi|319793875|ref|YP_004155515.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315596338|gb|ADU37404.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 332

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 126/370 (34%), Positives = 195/370 (52%), Gaps = 53/370 (14%)

Query: 26  NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSY 85
             +VQ +L L +     W V++  + +    +  G  FL+E AGF I +G + + +   +
Sbjct: 13  AWTVQALLVLAVVAGAFWVVHHALDVLRARGVRSGFDFLTEPAGFSISEGWLDFDASQPF 72

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A L G VNT   A    I + ++GTL+G GRL+ + L+  IC  YVE+ RN+P LV +
Sbjct: 73  WRAFLAGLVNTVRAAVPAAIFSVVLGTLIGIGRLAPHVLMRGICTAYVELLRNVPLLVQL 132

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  ++ ++LP P                                              
Sbjct: 133 LMLAFAMANLLPDPTEP------------------------------------------- 149

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                      + LP +++S   +     +      +  HF+ P  G F   GG+ +SPE
Sbjct: 150 ----------VRLLPGVWLSKGGLSVPWPVAGEGGWWPTHFEWPERGDFGVSGGAALSPE 199

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++   LS Y+AAF+AEIVR+G+++V +GQ+ A  ALGL+  +  R+V+LPQA+R I+P
Sbjct: 200 YVTIVAGLSFYSAAFVAEIVRAGILSVSQGQVLAGQALGLSSVQQLRIVILPQALRVIVP 259

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            LT+Q L+L+KNSSLAVAVG+ +LVSV  T I   G+A E I I M +YL LS++I+  M
Sbjct: 260 SLTNQLLSLVKNSSLAVAVGYPELVSVANTTIGSNGRAFECIAIIMAVYLLLSLVISFGM 319

Query: 386 NRLNAKIALK 395
           NR NA++AL+
Sbjct: 320 NRYNARVALR 329


>gi|148240912|ref|YP_001220413.1| amino acid ABC transporter permease protein precursor
           [Bradyrhizobium sp. BTAi1]
 gi|146411288|gb|ABQ39741.1| amino acid ABC transporter permease protein precursor
           [Bradyrhizobium sp. BTAi1]
          Length = 371

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 129/380 (33%), Positives = 210/380 (55%), Gaps = 9/380 (2%)

Query: 18  FLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV 77
              D R  +I +Q +L   +       V   + N++   + +G  FLS  +   I + I+
Sbjct: 1   MFNDARTRSIVIQCVLVAAVVGAAALLVTTTFTNLQTRGIPIGFDFLSMPSRIVISEAIL 60

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y S   Y  AI+VG  NT +++   ++ ++++G +VG  RLS+N L A  CRV+VE+ R
Sbjct: 61  SYKSRDPYYWAIVVGLANTVFVSALVIVFSSVLGLVVGVTRLSSNPLAAGTCRVWVEIAR 120

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N PP+V++ FLY     VLP    ++    G+F + RGL  P++ +       V   V G
Sbjct: 121 NSPPIVLLIFLYSLWWKVLPPVADALRPLPGVFASMRGLMVPSVHISLATAGVVLIIVAG 180

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++    A RL+           P L  +T  +     L L      +  D PV    NF 
Sbjct: 181 MLF--LAPRLAGSLRN----FRPALNWATVAVL---LLGLWFADATVSMDWPVFAGSNFQ 231

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG  ++PE  ++ I L+ YT  FIAEIVR G+++V  GQ +A  ++GL+  K  RL+++P
Sbjct: 232 GGLELTPELSTILIGLTIYTTGFIAEIVRGGVLSVGSGQWDAGRSVGLSRSKILRLIVIP 291

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q +R I+PPL SQY+N++KNS+LA+AVG+ D  +V  TII+++  +IE + I + +YL+L
Sbjct: 292 QMLRVIVPPLNSQYINVVKNSTLAIAVGYPDFFAVMNTIISKSSHSIEGVFIILGVYLAL 351

Query: 378 SIMIALFMNRLNAKIALKEK 397
           ++ ++   N  N +IA+ E+
Sbjct: 352 NLTLSSAANWYNRRIAIVER 371


>gi|152998089|ref|YP_001342924.1| binding-protein-dependent transporter inner membrane component
           [Marinomonas sp. MWYL1]
 gi|150839013|gb|ABR72989.1| binding-protein-dependent transport systems inner membrane
           component [Marinomonas sp. MWYL1]
          Length = 401

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 130/383 (33%), Positives = 204/383 (53%), Gaps = 10/383 (2%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
            FLY+ +V +  +Q+I   ++     +   N   NM  + L+ G  FL +RAG++I   +
Sbjct: 27  SFLYNRKVRDTLIQLIFFAVICFGITYLALNAATNMRDAGLTSGFDFLFQRAGYDISYSL 86

Query: 77  VPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           + Y    S++  A   G VNT   A   ++  T++   +   RLS N L++ +    VE 
Sbjct: 87  IHYDPKTSTHLMAWAAGMVNTIAFAVVAILLTTVMALCLAVMRLSQNFLLSKVSLCLVEY 146

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN+P LV I   Y   L +LP    +       FL+NRGLS P++  +      +    
Sbjct: 147 VRNVPILVHISVWYTLSL-MLPSVRQAFNFGDVSFLSNRGLSIPSVEWNYGLLASLVFAA 205

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L  VL  F     +     TG+ +  + + T ++  L +LV       + F  P L  FN
Sbjct: 206 LWTVLCFFV----KKRVSTTGRRIISVLLMTIVLAVLASLV---FTPVISFTAPKLVGFN 258

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F  G T+ PEF+ L IA+S Y+AA  +E++R  ++A+ +GQMEA +ALG+        V+
Sbjct: 259 FKHGWTLPPEFIMLIIAVSTYSAAHGSEVIRGSILAISKGQMEAGLALGVRPNIVMNKVI 318

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           +PQA+ SIIPP+TS Y+N+LK ++L   VGF D++   GG+ +N TGQAIE I+I M  Y
Sbjct: 319 IPQALHSIIPPMTSIYINVLKAAALGSVVGFMDIMGTMGGSSLNITGQAIECIVIVMVSY 378

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
             L++++A  M R N  + LK +
Sbjct: 379 GILNLILAAIMGRFNKAMQLKGR 401


>gi|148555538|ref|YP_001263120.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
 gi|148500728|gb|ABQ68982.1| binding-protein-dependent transport systems inner membrane
           component [Sphingomonas wittichii RW1]
          Length = 374

 Score =  225 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 129/366 (35%), Positives = 201/366 (54%), Gaps = 9/366 (2%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q+ L L L  + L     V +NME+ ++ L +GFL   A F I +  + Y    + A A 
Sbjct: 16  QVALLLALAGLVLVVARTVSDNMERQDMVLSLGFLRSTAEFPIAESFLAYAPGDTIAWAF 75

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +VG  N+  L    ++ +T+ G  +   R S + L   +   +V++ RN+P +V + F Y
Sbjct: 76  VVGLGNSIALTLLIIVLSTMAGVPIALARHSGHMLARTLAGGFVDLVRNVPLVVQLLFWY 135

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L   P    +     G+FL NRG++  T+ +   A   + + + G+ L+L  T    
Sbjct: 136 GVILMAFPPARAAAQPLPGLFLTNRGITVTTVGITGTALPMIVTVLGGLTLTLI-TAWRG 194

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           H H+ +          T       + + I L   L  D P   +FNF GG T++PEF+++
Sbjct: 195 HLHKASL--------CTLGTIVAGSALWIVLDLGLARDVPHFDRFNFTGGLTLTPEFVAV 246

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
                 Y +AF AEIVR GL  VPRGQ EA+ ALGL+ R++ RLV++PQA+R I+PP+ S
Sbjct: 247 LWGSVIYASAFAAEIVRGGLDGVPRGQWEASRALGLSKRQSLRLVIVPQALRMIVPPMNS 306

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++ +LKNS+LA+ VG+ DL  V  T IN TGQ +E + I M ++ +L+  I+L MNRLN
Sbjct: 307 QFITILKNSTLALVVGYPDLNFVANTAINHTGQGLEGVAILMLVFFTLASAISLAMNRLN 366

Query: 390 AKIALK 395
           A++   
Sbjct: 367 ARVQRG 372


>gi|103487894|ref|YP_617455.1| amino acid ABC transporter permease [Sphingopyxis alaskensis
           RB2256]
 gi|98977971|gb|ABF54122.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Sphingopyxis alaskensis RB2256]
          Length = 730

 Score =  225 bits (575), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 126/363 (34%), Positives = 194/363 (53%), Gaps = 16/363 (4%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           +L     V+       + +N+   N+  G GFL +RAGF I + ++ Y    SYA A+ V
Sbjct: 16  LLIAGGLVVAYGLFATLADNLADRNIRTGFGFLFDRAGFAIGETLIAYAPGDSYAAALAV 75

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +NT  ++  G+I +T++G  V   RLS+N L+A +  +Y+E+ RNIP L+ +F  Y +
Sbjct: 76  GLLNTLLISALGIIFSTLLGLAVCMARLSSNWLLARLSGLYIELVRNIPLLLQMFVWYAA 135

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +L  LP P    V PF +      L   +L       + +      I+L        R  
Sbjct: 136 LLFGLPGPGPGAVGPFDLDNRGLHLPALSLADPGRPVLLIAIVACAILLGAVRRGAVRTR 195

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                         T L F   +LV + L      D P  G+F  +GG + S EF++L  
Sbjct: 196 --------------TALAFAGISLVPLLL--WGGIDLPRAGRFGTVGGLSFSTEFLTLVT 239

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           +LS Y +A++AEI R  ++AVP GQ EAA ALGL+  +    +++PQA+R  IPP+TS +
Sbjct: 240 SLSVYASAYLAEIFRGAILAVPAGQSEAAKALGLSPAQTMGRIVIPQALRIAIPPMTSWH 299

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LN +KNSSL VA+G+ + VSV  T+I+QTGQAIE + + +  +L LS+ +A    R   +
Sbjct: 300 LNTIKNSSLGVAIGYPEFVSVVDTVISQTGQAIEGVGLIVATFLLLSLSLAFVTGRYARR 359

Query: 392 IAL 394
           +  
Sbjct: 360 LGW 362



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 18/231 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
                ++     S   +T+   +   V +F L I+L+       R    +  +   +++I
Sbjct: 511 FAGLSYVPMEKWSGLPVTLLLASLAVVGAFPLAILLAF-----GRRSTRRGIRWPSVVFI 565

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L+ G P + ++ L   L           F+           + +AL  +TAA++AE+
Sbjct: 566 E--LVRGTPLIGVLFLAAVLFPL--------FVPSYLSIDSLPRVQLALIFFTAAYMAEV 615

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL+AVP GQ EAA ALGLT  +A R +LLPQA++  +P L +  ++ +KN++L + V
Sbjct: 616 IRGGLLAVPVGQAEAAHALGLTKWQARRHILLPQALKVSVPGLVNTSISEVKNTTLVLIV 675

Query: 345 GFADLVSVGG-TIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     + +    +    E  L    I+  L   ++    ++  K+
Sbjct: 676 GVFDLLQTTRLSYVEAQWRPYFAEAYLFTGTIFFLLCFSLSRLSMKIERKL 726



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 54/159 (33%), Gaps = 4/159 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T  LA   ++ A  +  L+  GR S  + + W   V++E+ R  P + V+F   
Sbjct: 522 WSGLPVTLLLASLAVVGAFPLAILLAFGRRSTRRGIRWPSVVFIELVRGTPLIGVLFLAA 581

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
                 +P       LP          +     +     + V         +L  T+   
Sbjct: 582 VLFPLFVPSYLSIDSLPRVQLALIFFTAAYMAEVIRGGLLAVPVGQAEAAHALGLTKWQA 641

Query: 210 HFHEKTGKAL----PLLYISTFLIFGLPTLVLIALKYQL 244
             H    +AL    P L  ++       TLVLI   + L
Sbjct: 642 RRHILLPQALKVSVPGLVNTSISEVKNTTLVLIVGVFDL 680


>gi|150397300|ref|YP_001327767.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
 gi|150028815|gb|ABR60932.1| binding-protein-dependent transport systems inner membrane
           component [Sinorhizobium medicae WSM419]
          Length = 402

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 107/378 (28%), Positives = 186/378 (49%), Gaps = 23/378 (6%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG------------IV 77
           Q  +      + +     V   + +  +     FL + AGF++ +G              
Sbjct: 33  QFAVIAAAITLVVLFALAVKEGLARHGIRFSFSFLWDAAGFDLSEGKTFVFDGTFWLAFT 92

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +TS+ S A A   G VNT  +A   ++ +T++G L+G  RLS N +   +    VE  R
Sbjct: 93  EFTSERSIAQAFAAGIVNTTKVAVLAIVLSTMLGVLLGVSRLSTNWVARSLSFWCVEFVR 152

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N P L+ + F Y +V+   P P  +    +G+ ++ +GL FP L           +    
Sbjct: 153 NTPLLIQLVFWYFAVILHFP-PIAAAAEFYGVVISQQGLFFPALVWKGEGSPVAIAMATA 211

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
             +++      +H   +      ++ +            L+ L   +  D PV  +F   
Sbjct: 212 CWVAILGLVFDKHRLVRRVCMGAIVVLPC----------LMLLTGIVELDFPVASKFRAK 261

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           GG+ +SPE  +L +A+   +A++IAEIVR  + A+P+GQ EAA +LGL+ R     ++LP
Sbjct: 262 GGTGMSPEMAALLLAIVVNSASYIAEIVRGAIDALPKGQWEAAASLGLSRRDTVHDIILP 321

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q  R ++P   +QY++L KN++L +AVG+ +L ++ GTI NQTG ++E ILI M  YL L
Sbjct: 322 QVFRVVLPSFGNQYISLTKNTALGIAVGYPELFNIYGTIANQTGHSLEGILIVMASYLIL 381

Query: 378 SIMIALFMNRLNAKIALK 395
           S  I+  +   + +++ +
Sbjct: 382 SWAISATVAWADRRLSKR 399


>gi|39935695|ref|NP_947971.1| polar amino acid ABC transpor permease AapQ-2 [Rhodopseudomonas
           palustris CGA009]
 gi|39649548|emb|CAE28070.1| polar amino acid ABC transpor permease protein, aapQ-2
           [Rhodopseudomonas palustris CGA009]
          Length = 389

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 126/369 (34%), Positives = 215/369 (58%), Gaps = 7/369 (1%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q+ + + + V+     +N+   M +  L+ G GFL   A FEI +  +P+ +  SYA AI
Sbjct: 26  QLAVLVAVIVLVAIMGSNIAATMARIGLTPGFGFLERAAKFEIGESTIPFRAGDSYARAI 85

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            VG +NT  +A    I AT++G  +   RL+ + +++ + R  +EV RN P L+ +FF  
Sbjct: 86  AVGVLNTAKVAVVSCILATVLGVALALMRLAGHPVLSGLVRWSIEVVRNTPLLLQLFFWI 145

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            ++   LP P  ++V    +FL NRG+  P++ +   + + + +    ++  L     SR
Sbjct: 146 -ALAHALPPPRRAVVWFDCVFLTNRGVYLPSVIIAEGSWMAITAIAAILLGWLALLWRSR 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                +   L L+ I    +      V+ A  +++    PV+  FN  GG++++PEF +L
Sbjct: 205 TRGPLSPLPLGLVAILALAV------VIYASGFRISLHSPVVQGFNIQGGTSLTPEFAAL 258

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L+   AA  AEIVR+G+++V R Q +AA ALGL+  +  RLV+LPQA+R I P  TS
Sbjct: 259 LVGLTVKFAAIFAEIVRAGILSVRREQWDAARALGLSEFQIVRLVVLPQALRVITPLATS 318

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            YL+++K+SSLAVA+G+ DL+++  T  N TGQA+E +LI + +YL+L++ ++  MN  N
Sbjct: 319 CYLDVIKDSSLAVAIGYPDLMNITNTTANTTGQALETLLIVVALYLTLNLSVSAVMNVYN 378

Query: 390 AKIALKEKK 398
           A++A++  +
Sbjct: 379 ARVAMRGGR 387


>gi|209549222|ref|YP_002281139.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209534978|gb|ACI54913.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 779

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 116/396 (29%), Positives = 197/396 (49%), Gaps = 23/396 (5%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           V     + + L + R+ + ++Q+ +  L+ V+       V   + +  +     FL+  A
Sbjct: 13  VESDSLKSRRLRN-RIRHEAIQLGIVGLVVVLLGILAYAVKAGLSEKGIRFSFSFLANTA 71

Query: 69  GFEIDQGIV------------PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           GF+I +G               ++SD S A+A + G  NT  +A   +  +TI+GTL+G 
Sbjct: 72  GFDISEGWTLTSGEGVVPGLSQFSSDMSVASAFVTGIFNTAKVALLAIALSTILGTLLGV 131

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GRLS N +V  +C   VE  RN P L+ + F Y +V+   P    +  L  G+ ++ +G+
Sbjct: 132 GRLSTNWVVRNLCFWIVEFVRNTPLLIQLVFWYFAVVLRFPPMASAAKLYGGLIVSQQGI 191

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
             PTL             V    +S+           +    + +  +   L+       
Sbjct: 192 YVPTLAWSGGVSTLSLILVTATWVSVLGAVFDPIRGMRRI-CIAVAVVCFGLLIATG--- 247

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                  +  D PV  +F   GG+++SPE  +L +A+   +A+FIAEIVR  + A+P+ Q
Sbjct: 248 ------GMTVDFPVANKFKASGGTSISPEMAALLLAVVVNSASFIAEIVRGAIDALPKSQ 301

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA +LG + R     ++LPQ  R ++P   +QY++L KN++L +AVG+ DL ++ GTI
Sbjct: 302 WEAAGSLGFSRRDTVNDIVLPQVFRVVLPSFGNQYISLTKNTALGIAVGYPDLFNIYGTI 361

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            NQTG ++E I+I M  YL LS +I+  +   N ++
Sbjct: 362 ANQTGHSLEGIIIVMASYLILSWIISSAVYWANRRL 397



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 9/187 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +   L  I T+ I  + ++ LI + Y +    PVL     +       +     I  
Sbjct: 599 RQSRLSSLRIICTWYIEVMRSVPLILVVYWIWILMPVLAPQWGL------ADVARGMIGF 652

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + AA++AE VRSGL AVPR Q EAA +LG++     R  +LPQA+R ++ PL    L+
Sbjct: 653 TIFYAAYVAEYVRSGLQAVPRAQTEAARSLGMSEFDINRSTVLPQALRVVVAPLVGNVLD 712

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +  ++ L   +G  D +  G  I+       +  E++   +  Y  +  +I     +L  
Sbjct: 713 IFNSAPLVFIIGLTDFLRAGQMILANPQYGDRTFEVLSFLLITYFLVGSLITYAARKLED 772

Query: 391 KIALKEK 397
            +A   +
Sbjct: 773 HMATSTR 779


>gi|239815921|ref|YP_002944831.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802498|gb|ACS19565.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 332

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 126/350 (36%), Positives = 186/350 (53%), Gaps = 53/350 (15%)

Query: 46  NNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMI 105
           N+    +    +  G  FL+E AGF I +G + + +   +  A L G VNT   +    I
Sbjct: 33  NHALEVLRARGVRSGFDFLAEPAGFSISEGWLGFEASQPFWRAFLAGLVNTVRASVPAAI 92

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            + ++GTL+G GRL+ + L+  IC  YVE+ RN+P LV +  L  ++ ++LP P   + L
Sbjct: 93  FSVVLGTLIGIGRLAPHVLLRGICTAYVELLRNVPLLVQLLMLAFAIANLLPDPTEPVRL 152

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
             G++L+  GLS P                                              
Sbjct: 153 LPGVWLSKGGLSVPWPASGEGGWW------------------------------------ 176

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                              HFD P  G F   GG+ +SPE++++   LS Y+AAF+AEIV
Sbjct: 177 -----------------PTHFDWPERGDFGVSGGAALSPEYVTIVAGLSFYSAAFVAEIV 219

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+++VP+GQ+ A  ALGL   +  R+V+LPQA+R I+P LT+Q L+L+KNSSLAVAVG
Sbjct: 220 RAGILSVPQGQVLAGQALGLAPVQQLRIVILPQALRVIVPSLTNQLLSLVKNSSLAVAVG 279

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + +LVSV  T I   G+A E I I M +YL LS++I+  MNR NA++AL+
Sbjct: 280 YPELVSVANTTIGSNGRAFECIAIIMAVYLLLSLLISFGMNRYNARVALR 329


>gi|190891653|ref|YP_001978195.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696932|gb|ACE91017.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 404

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 115/377 (30%), Positives = 190/377 (50%), Gaps = 22/377 (5%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIV---------- 77
            +Q+ +  L+ V+       V   + +  +     FL+  AGF+I +G            
Sbjct: 31  VIQLGIVALVVVLLGMLAYAVKAGLAEKGIRFSFSFLANTAGFDISEGWTLTSGEGFVPN 90

Query: 78  --PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
              ++SD S A+A + G  NT  +A   +I +TI+GT++G GRLS N +V  +C   VE 
Sbjct: 91  LAQFSSDMSIASAFVTGIFNTAKIALLAIILSTILGTMLGVGRLSTNWVVRNLCFWIVEF 150

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN P L+ + F Y +V+   P    +  L  G+ ++ +G+  PTL+            V
Sbjct: 151 VRNTPLLIQLVFWYFAVVLRFPPMASAAKLYGGLVVSQQGIYIPTLSWTGGVSTLSLILV 210

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
               +SL           +   A   +            L L+    ++  + PV  +F 
Sbjct: 211 TATGVSLLGAVFDPVRGARRICAAAAVVC----------LGLLVATGEMTVNFPVANKFK 260

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             GG+++SPE  +L +A+   +A+FIAE VR  + A+P+ Q EAA +LGL+ R     ++
Sbjct: 261 ASGGTSISPEMAALLLAIVVNSASFIAETVRGAIDALPKAQWEAAGSLGLSRRDTVNDII 320

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ  R ++P   +QY++L KN++L +AVG+ DL ++ GTI NQTG ++E I+I M  YL
Sbjct: 321 LPQVFRVVLPSFGNQYISLSKNTALGIAVGYPDLFNIYGTIANQTGHSLEGIIIVMASYL 380

Query: 376 SLSIMIALFMNRLNAKI 392
            LS  I+  +   N ++
Sbjct: 381 ILSWNISSSVYWANRRL 397


>gi|192291278|ref|YP_001991883.1| ABC transporter inner membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285027|gb|ACF01408.1| binding-protein-dependent transport systems inner membrane
           component [Rhodopseudomonas palustris TIE-1]
          Length = 389

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 124/369 (33%), Positives = 212/369 (57%), Gaps = 7/369 (1%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q+ + + + V+     +N+   M +  L+ G GFL   A FEI +  + + +  SYA AI
Sbjct: 26  QLAVLVAVIVLVAIMGSNIAATMARIGLTPGFGFLERAANFEIGESTISFRAGDSYARAI 85

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            VG +NT  +A    I AT++G  +   RL+ + +++ + R  +EV RN P L+ +FF  
Sbjct: 86  AVGVLNTAKVAVLSCILATVLGVALALLRLAGHPVLSGLVRWSIEVVRNTPLLLQLFFWI 145

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            ++   LP P  ++V    +FL NRG+  P++ +   + + + +    ++  L     SR
Sbjct: 146 -ALAHALPPPRRAVVWFDCVFLTNRGVYLPSVIIAEGSWMAITAIAAILLGWLALLWRSR 204

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                    L L+ I    +      V+ A  +++    P +  FN  GG++++PEF +L
Sbjct: 205 KRGPLAPLPLGLVAILALAV------VIYASGFRISLHSPAVQGFNIQGGTSLTPEFAAL 258

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L+   AA  AEIVR+G+++V R Q +AA ALGL+  +  RLV+LPQA+R I P  TS
Sbjct: 259 LVGLTVKFAAIFAEIVRAGILSVRREQWDAARALGLSEFQIVRLVVLPQALRVITPLATS 318

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            YL+++K+SSLAVA+G+ DL+++  T  N TGQA+E +LI + +YL+L++ ++  MN  N
Sbjct: 319 CYLDVIKDSSLAVAIGYPDLMNITNTTANTTGQALETLLIVVALYLTLNLSVSAVMNVYN 378

Query: 390 AKIALKEKK 398
           A++A++  +
Sbjct: 379 ARVAMRGGR 387


>gi|310816975|ref|YP_003964939.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Ketogulonicigenium vulgare Y25]
 gi|308755710|gb|ADO43639.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztB [Ketogulonicigenium vulgare Y25]
          Length = 478

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 144/475 (30%), Positives = 216/475 (45%), Gaps = 82/475 (17%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           + +     F   + L D R  +I++QII  +L  + F W V N   N+ +   +    FL
Sbjct: 4   STQPPKESFQIGQLLSDTRYRSITIQIIALILFALGFWWLVGNTIENLSRLGKTFSFSFL 63

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            +R+ ++I+Q ++ Y S S++  A +VG +NT  +A  G + AT+IG + G  RLS N +
Sbjct: 64  GQRSNYDINQRLISYDSTSTHGRAAVVGILNTLLVAAMGCVLATVIGVMAGVLRLSKNWI 123

Query: 125 VA-----------------WICRVYVEVFRNIP-----------PLVVIFFLYKSVLSVL 156
           VA                 WI  +Y  V  + P            L+       +    +
Sbjct: 124 VARLMAVYIEGFRNVPLLLWILLIYAMVSESTPAPRAFGSGDASMLLWDSIAITNRGIYI 183

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTM------------DTNAKIFVFSFVLGI------ 198
           P P  +      +     GL                      ++      VLGI      
Sbjct: 184 PGPVFTPGAWLVLAAFIVGLGVAWQQWSASRKRQIATGTPPMSRWLAAGIVLGITGLVYL 243

Query: 199 ---------------VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                           + +     +R       K +P    ++        + L+   Y 
Sbjct: 244 LQGGIVFTLLFLLQLAIVVAVFIYTRRALRPALKYVPSQTAASTAAALAGIVALLWALYI 303

Query: 244 --------------------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                               +  D P LG FNF GG  V    ++L++ALS YT AFIAE
Sbjct: 304 APIIWAALTTPFGAPAFNPSIALDIPALGGFNFTGGFNVRASLVALWLALSLYTGAFIAE 363

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG++AVP+GQ EAA ALG+   ++  +V+LPQAMR I+PP+ SQYLNL KNSSLA+A
Sbjct: 364 IVRSGIMAVPKGQSEAAAALGMPAGRSMTMVILPQAMRVIVPPMISQYLNLTKNSSLAIA 423

Query: 344 VGFADL-VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           VG+ D+  ++GG  INQTG+ +E +L+    YL LS+MIA   N  NA++ LKE+
Sbjct: 424 VGYMDVRATLGGITINQTGRELEGMLLMGMFYLVLSLMIAGVGNWFNARVKLKER 478


>gi|319782290|ref|YP_004141766.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168178|gb|ADV11716.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 387

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 114/380 (30%), Positives = 192/380 (50%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
           +  L + +V N  +Q++    +  + L  +     N+    ++ G  FL +  G++++  
Sbjct: 2   VSLLRNQKVRNALLQVLYVGSIAAMVLAGIVIARRNLADQGITSGFDFLFKSTGWDVNFS 61

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++P T++  Y    L+G +NT +L   G+I ATI+GT+VG  R S+N L   + R YV++
Sbjct: 62  LLPATANDPYWWYFLIGIINTLFLGSVGLILATIVGTIVGLARTSSNDLARLLGRTYVDI 121

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRNIP ++ +FF Y  +  +           F +      + FP +     A   V    
Sbjct: 122 FRNIPLILQVFFWYAIITHLPTPRSAHEAWGFLLTSRGLYIPFPNVGSAAFAAATVAVIA 181

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
             ++ +               + +     +  L      L L  L      D P L   N
Sbjct: 182 AIVLPAWLGRTSLLAQPIGQRRTIQFAAAAAALACATIILALGRLPDTPLLDFPALQGLN 241

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             GG  + PEF +L IA++ Y  ++IAEIVR G  +V  GQ+EAA++LGL+  +   LV 
Sbjct: 242 LRGGLRIPPEFATLAIAIAIYGGSYIAEIVRGGFKSVGTGQVEAALSLGLSPWRVFTLVR 301

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LP A+R+++P L +QY+ L+K +++ +AVGF D   +    IN +GQ +E I I M  +L
Sbjct: 302 LPLALRAMLPILANQYVWLMKATTMGIAVGFTDFFMIVALTINHSGQTLEAIGILMAGFL 361

Query: 376 SLSIMIALFMNRLNAKIALK 395
           ++++ +A   NR+N  IALK
Sbjct: 362 AINLSLAAVFNRINKAIALK 381


>gi|197104925|ref|YP_002130302.1| ABC-type amino acid transport system, permease component
           [Phenylobacterium zucineum HLK1]
 gi|196478345|gb|ACG77873.1| ABC-type amino acid transport system, permease component
           [Phenylobacterium zucineum HLK1]
          Length = 388

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 125/372 (33%), Positives = 200/372 (53%), Gaps = 3/372 (0%)

Query: 26  NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSY 85
            I  Q     L+    L    +   N++   L LG+ FL +RAGF+I   ++P+  + +Y
Sbjct: 20  AILAQAGAVALVAAALLLVAVSTAANLQARGLPLGLEFLGDRAGFKIADTVLPFGPEDTY 79

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             AI V   NT +L+    + AT+IGT +G  RLSAN LVA +  V+VE  RN PP++++
Sbjct: 80  LQAIGVAVANTVFLSALVCVAATVIGTALGVARLSANPLVAGLAAVWVEAMRNTPPVLLL 139

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
            FLY     V+P+     +LP  +       +   +       +           +++  
Sbjct: 140 IFLYAYWGQVMPVGGARELLPGLLVSIRGVAAPRLVAEWPLLGLAGALAA---GAAVYGA 196

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                              +   +  L  L   A+   L  + P     +  GG+ ++PE
Sbjct: 197 AALAGRAAARRGRPRPHRAAAAGVIVLGALAAFAIHPPLRLETPAATGDDLAGGARLTPE 256

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +++  L+ YTAAFIAEIVRSG+ +VPRGQ EAA ALGL  R+  RLV  PQ +R I+P
Sbjct: 257 FATVFAGLTVYTAAFIAEIVRSGVQSVPRGQWEAARALGLKERQILRLVAFPQMLRVIVP 316

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TSQY+N +KNS+LA+A+G+++ ++V GT+IN+T   IE  LI + +YL+L++ +A  +
Sbjct: 317 PMTSQYINTVKNSTLAIAIGYSEFMTVMGTVINRTNHPIEGTLIILLVYLALNLALAALL 376

Query: 386 NRLNAKIALKEK 397
           +  N ++ L+ +
Sbjct: 377 DLYNRRVQLEGR 388


>gi|209547000|ref|YP_002278918.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538244|gb|ACI58178.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 402

 Score =  209 bits (533), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 112/362 (30%), Positives = 185/362 (51%), Gaps = 19/362 (5%)

Query: 48  VYNNMEKSNLSLGIGFLSERAGFEIDQG-----------IVPYTSDSSYATAILVGFVNT 96
           +  ++ +  ++   G+L   + F + +G           +V  TSDS+    +  G  NT
Sbjct: 49  IQQSLAERGIAFSFGYLFRPSQFNVSEGFAAVWDGWWPALVQVTSDSTNLQMLTAGLFNT 108

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             +A   ++ +T+IG + G  RLS N L+  I    VE  RN P L+ + F Y +    +
Sbjct: 109 IKVALLAILFSTVIGVIFGVARLSTNWLIRQIAFAIVEFVRNTPLLIQVVFWYFAFFLRV 168

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           P    +  +         GL  P L +           V+ I L++    L+       G
Sbjct: 169 PPVTDAANVEKWFVFGQSGLFLPLLQISDGVDS---GTVVLIALAIALMILACWPRLSLG 225

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +   L     F    +      A  +++    P++G+F   GG  +SPE  ++ IA+   
Sbjct: 226 RRWVL-----FGAGAVAAAAGYATGFRMDLALPLVGRFGATGGLQLSPEMSAILIAIVVN 280

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+IAEIVR  +  +P+GQ EAA A+GL+ +   R V+LPQ  R I+P L ++Y++L K
Sbjct: 281 SAAYIAEIVRGAIEGLPKGQWEAAAAVGLSRKDTIRDVILPQVFRIILPSLANRYISLTK 340

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SL +A+GF DL +V GT+ NQTG ++E +LI M IYL LS +I+ F+N LN ++ L+ 
Sbjct: 341 DTSLGIAIGFPDLFNVSGTVANQTGHSLETVLIVMAIYLMLSWLISAFINFLNGRVILEG 400

Query: 397 KK 398
            +
Sbjct: 401 AR 402


>gi|218514141|ref|ZP_03510981.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 277

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 155/277 (55%), Positives = 194/277 (70%)

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            N L+A +C VYVEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP 
Sbjct: 1   RNWLIAKLCTVYVEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGAYLNNRGLSFPK 60

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                   +   + V+ IV ++   R +      TG+    ++ S  L+ GLP +  +  
Sbjct: 61  PIFGDTFWLVGVALVVAIVAAIATARWAHRRQAATGQQFHTIWASIGLLIGLPLIAFLVA 120

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L FD P+ G+FN  GGS V PEFMSL++ALS YTAAFIAEIVR+G+  VP+GQ EAA
Sbjct: 121 GAPLSFDYPIAGKFNLTGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVPKGQTEAA 180

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL     TRLV++PQA R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T +NQT
Sbjct: 181 GALGLHPSSITRLVVIPQAFRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGSTTLNQT 240

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           GQA+E+ILIWM +YLSLSI+ +L MN  NAK+AL E+
Sbjct: 241 GQAVEVILIWMVVYLSLSIVTSLLMNWFNAKMALVER 277


>gi|312865954|ref|ZP_07726175.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus downei F0415]
 gi|311098358|gb|EFQ56581.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus downei F0415]
          Length = 731

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 27/351 (7%)

Query: 58  SLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG------ 111
           +    +L++RAG +    +  Y   S+   ++  G V+      + +  A   G      
Sbjct: 393 TASYDWLTQRAG-QYGYTVRAYDDGSTLYDSLQNGSVDAMMDDEAVLKYAIKQGRKFKTP 451

Query: 112 --------TLVGAGRLSANKLVAWICRVYVEVFR-NIPPLVVIFFLYKSVLSVLPIPDHS 162
                         + S  +LV         + +      +V  +L ++  S     D +
Sbjct: 452 IKGEKSGDVGFAVKKGSNPELVQMFNNGLASLVKSGKYDKIVNKYLAENKESKQKKADET 511

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
            ++        + L    +T+      F  + V+GI+  + A         K  + +  +
Sbjct: 512 TIVGLIQNNYKQLLQGLWITVALTLLSFAIAMVIGIIFGMMAVA-----PNKILQGIAKV 566

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++   ++ G+P +++ A  Y      P L + +  G  +   +F++  IALS   AA+IA
Sbjct: 567 FVD--VVRGIPLMIVAAFIYW---GIPNLIE-SITGHQSPINDFVAATIALSLNAAAYIA 620

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AVP+GQMEA+ +LG+ + K  R V+LPQA+R ++P   +Q++  LK++++  
Sbjct: 621 EIVRGGIEAVPKGQMEASRSLGIPYGKTMRKVILPQAVRVMLPNFINQFVISLKDTTIVS 680

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  K+ 
Sbjct: 681 AIGLVELFQTGKIIIARNYQSFRMYAILAIIYLVIITLLTRLAKRLERKLK 731


>gi|87302593|ref|ZP_01085410.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus sp. WH 5701]
 gi|87282937|gb|EAQ74894.1| ABC-type permease for basic amino acids and glutamine
           [Synechococcus sp. WH 5701]
          Length = 329

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 126/389 (32%), Positives = 196/389 (50%), Gaps = 60/389 (15%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           ++    R+ +  D RV    VQ ++ L+L ++    V N+  N+  + L L   +LS+ A
Sbjct: 1   MSATLKRIPWWRDRRVLPWIVQAVVGLVLLLVITLLVGNLVRNLTAAGLLLSWRWLSQPA 60

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F++ + ++P+ +   Y  A+LVG VN+  +   G++ AT++GT +G    S N L+  +
Sbjct: 61  SFDVAESLIPFDASMPYWRALLVGLVNSLRVILVGLVGATLLGTAMGMASFSGNGLLRRL 120

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            RVYVEV RNIP L+ + F Y  V   LP    +  LP  +   +               
Sbjct: 121 ARVYVEVIRNIPLLLQLLFWYFVVFLALPNGTAAFQLPGIVLSKS--------------- 165

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
                   G+ L+ FA   S                                     +  
Sbjct: 166 --------GLYLAWFAQGFS-------------------------------------WQG 180

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L    +     +S EF +L   L  YT AF+AE+VR G+ +VP+GQ EAA +LGL   
Sbjct: 181 PELVNGVWRAPLRLSVEFTALLTGLITYTGAFVAEVVRGGIASVPKGQWEAATSLGLHWS 240

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            + R V+LPQA+R I+P L SQY++L KNSSLAVAVG+ DL SV  T +NQTG+A+E+ L
Sbjct: 241 ASMRSVVLPQALRVIVPGLNSQYISLAKNSSLAVAVGYVDLYSVSETTLNQTGRALEVFL 300

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +  YL + ++I+  MN +N  + ++E+
Sbjct: 301 LLLGSYLIIDLLISAVMNGVNQLVQIRER 329


>gi|260757722|ref|ZP_05870070.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260668040|gb|EEX54980.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
          Length = 289

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 92/233 (39%), Positives = 128/233 (54%), Gaps = 8/233 (3%)

Query: 2   IKNARKTVTRYFSR--------MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNME 53
            +  RK +  YF             LYD R   I  Q+++   +     W V N   N++
Sbjct: 56  AERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQ 115

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG L
Sbjct: 116 RANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFL 175

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VG GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NN
Sbjct: 176 VGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINN 235

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           RG   P+      A     + ++GI+ S    R ++     TG+    + +S 
Sbjct: 236 RGFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSA 288


>gi|260545548|ref|ZP_05821289.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260096955|gb|EEW80830.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
          Length = 284

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 92/233 (39%), Positives = 128/233 (54%), Gaps = 8/233 (3%)

Query: 2   IKNARKTVTRYFSR--------MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNME 53
            +  RK +  YF             LYD R   I  Q+++   +     W V N   N++
Sbjct: 51  AERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQ 110

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG L
Sbjct: 111 RANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFL 170

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VG GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NN
Sbjct: 171 VGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINN 230

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           RG   P+      A     + ++GI+ S    R ++     TG+    + +S 
Sbjct: 231 RGFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSA 283


>gi|307155069|ref|YP_003890453.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7822]
 gi|306985297|gb|ADN17178.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7822]
          Length = 511

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 19/283 (6%)

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G  RL  N        +Y + F   PP + +           P  D              
Sbjct: 240 GIARLLENGTYQ---SIYEKWFGTQPPELPL---------TAPSLDSQSEKFDPQSFYIN 287

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         +  FS + G++       L+        + L  +Y+  F   G P 
Sbjct: 288 LFQNLIKGAGITVLLTAFSVLFGLMGGTLI-ALALISPYSLLRLLCRIYVDFF--RGTPM 344

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + + Y   F  P L Q + +G     P F +  IALS   AA++AEI+R G+ ++ R
Sbjct: 345 LVQLFIIY---FGLPALFQ-DHLGIEWSLPRFPAAVIALSLNVAAYLAEIIRGGIESIDR 400

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA  +LG+T ++  + V+ PQA R I+PPL ++++ L+K++SL   +GF +L   G 
Sbjct: 401 GQWEACESLGMTPQQTMQDVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELFREGQ 460

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I+  T +A E+ +    +YL L+ + ++    L A +   E+
Sbjct: 461 LIVAVTYKAFEVYIAVALVYLILTSLSSIAFKWLEAAMNPLER 503



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 79  YTSDSSY---ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +   S Y      ++ G   T  L    ++   + GTL+    +S   L+  +CR+YV+ 
Sbjct: 279 FDPQSFYINLFQNLIKGAGITVLLTAFSVLFGLMGGTLIALALISPYSLLRLLCRIYVDF 338

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIP 159
           FR  P LV +F +Y  + ++    
Sbjct: 339 FRGTPMLVQLFIIYFGLPALFQDH 362


>gi|315173030|gb|EFU17047.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
          Length = 722

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  ++     +     D S  + F      + L    +T+      FV + ++G++  L
Sbjct: 489 IIGTYVKDGNEAKEETADESTFVGFMQNNWKQLLHGLWMTILLTLICFVLALIVGVIFGL 548

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F+         K  + L  +Y+   LI G+P +V   L + ++F  P +  FN       
Sbjct: 549 FS-----VSPIKALRVLSTIYVD--LIRGIPLMV---LAFFIYFGLPGVLGFNI------ 592

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +LGL++ +  + ++LPQA+R 
Sbjct: 593 -PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSLGLSYNRTMQKIILPQAIRI 651

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+  +  +   IYL L   + 
Sbjct: 652 MIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQSTMVYFVIALIYLILITSLT 711

Query: 383 LFMNRLNAKI 392
                L  K+
Sbjct: 712 KLAKNLEKKV 721



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L G   T  L     + A I+G + G   +S  K +  +  +YV++ R IP +
Sbjct: 515 QNNWKQLLHGLWMTILLTLICFVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLM 574

Query: 143 VVIFFLYKSVL 153
           V+ FF+Y  + 
Sbjct: 575 VLAFFIYFGLP 585


>gi|315166947|gb|EFU10964.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
          Length = 722

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  ++     +     D S  + F      + L    +T+      FV + ++G++  L
Sbjct: 489 IIGTYVKDGNEAKEETADESTFVGFMQNNWKQLLHGLWMTILLTLISFVLALIVGVIFGL 548

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F+         K  + L  +Y+   LI G+P +V   L + ++F  P +  FN       
Sbjct: 549 FS-----VSPIKALRVLSTIYVD--LIRGIPLMV---LAFFIYFGLPGVLGFNI------ 592

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +LGL++ +  + ++LPQA+R 
Sbjct: 593 -PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSLGLSYNRTMQKIILPQAIRI 651

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+  +  +   IYL L   + 
Sbjct: 652 MIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQSTMVYFVIALIYLILITSLT 711

Query: 383 LFMNRLNAKI 392
                L  K+
Sbjct: 712 KLAKNLEKKV 721



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L G   T  L     + A I+G + G   +S  K +  +  +YV++ R IP +
Sbjct: 515 QNNWKQLLHGLWMTILLTLISFVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLM 574

Query: 143 VVIFFLYKSVL 153
           V+ FF+Y  + 
Sbjct: 575 VLAFFIYFGLP 585


>gi|29375354|ref|NP_814508.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227554876|ref|ZP_03984923.1| amino acid ABC superfamily ATP binding cassette transporter protein
           [Enterococcus faecalis HH22]
 gi|256761528|ref|ZP_05502108.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|257081023|ref|ZP_05575384.1| ABC-type amino acid transport/signal transduction protein system
           [Enterococcus faecalis E1Sol]
 gi|257083683|ref|ZP_05578044.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Fly1]
 gi|257418368|ref|ZP_05595362.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|29342814|gb|AAO80578.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227175989|gb|EEI56961.1| amino acid ABC superfamily ATP binding cassette transporter protein
           [Enterococcus faecalis HH22]
 gi|256682779|gb|EEU22474.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256989053|gb|EEU76355.1| ABC-type amino acid transport/signal transduction protein system
           [Enterococcus faecalis E1Sol]
 gi|256991713|gb|EEU79015.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Fly1]
 gi|257160196|gb|EEU90156.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|315573457|gb|EFU85648.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315581418|gb|EFU93609.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 722

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  ++     +     D S  + F      + L    +T+      FV + ++G++  L
Sbjct: 489 IIGTYVKDGNEAKEETADESTFVGFMQNNWKQLLHGLWMTILLTLISFVLALIVGVIFGL 548

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F+         K  + L  +Y+   LI G+P +V   L + ++F  P +  FN       
Sbjct: 549 FS-----VSPIKALRVLSTIYVD--LIRGIPLMV---LAFFIYFGLPGVLGFNI------ 592

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +LGL++ +  + ++LPQA+R 
Sbjct: 593 -PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSLGLSYNRTMQKIILPQAIRI 651

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+  +  +   IYL L   + 
Sbjct: 652 MIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQSTMVYFVIALIYLILITSLT 711

Query: 383 LFMNRLNAKI 392
                L  K+
Sbjct: 712 KLAKNLEKKV 721



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L G   T  L     + A I+G + G   +S  K +  +  +YV++ R IP +
Sbjct: 515 QNNWKQLLHGLWMTILLTLISFVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLM 574

Query: 143 VVIFFLYKSVL 153
           V+ FF+Y  + 
Sbjct: 575 VLAFFIYFGLP 585


>gi|315029877|gb|EFT41809.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
          Length = 722

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  ++     +     D S  + F      + L    +T+      FV + ++G++  L
Sbjct: 489 IIGTYVKDGNEAKEETADESTFVGFMQNNWKQLLHGLWMTILLTLISFVLALIVGVIFGL 548

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F+         K  + L  +Y+   LI G+P +V   L + ++F  P +  FN       
Sbjct: 549 FS-----VSPIKALRVLSTIYVD--LIRGIPLMV---LAFFIYFGLPGVLGFNI------ 592

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +LGL++ +  + ++LPQA+R 
Sbjct: 593 -PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSLGLSYNRTMQKIILPQAIRI 651

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+  +  +   IYL L   + 
Sbjct: 652 MIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQSTMVYFVIALIYLILITSLT 711

Query: 383 LFMNRLNAKI 392
                L  K+
Sbjct: 712 KLAKNLEKKV 721



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L G   T  L     + A I+G + G   +S  K +  +  +YV++ R IP +
Sbjct: 515 QNNWKQLLHGLWMTILLTLISFVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLM 574

Query: 143 VVIFFLYKSVL 153
           V+ FF+Y  + 
Sbjct: 575 VLAFFIYFGLP 585


>gi|307296217|ref|ZP_07576045.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306496091|gb|EFM65673.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|315159996|gb|EFU04013.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
          Length = 722

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  ++     +     D S  + F      + L    +T+      FV + ++G++  L
Sbjct: 489 IIGTYVKDGNEAKEETADESTFVGFMQNNWKQLLHGLWMTILLTLISFVLALIVGVIFGL 548

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F+         K  + L  +Y+   LI G+P +V   L + ++F  P +  FN       
Sbjct: 549 FS-----VSPIKALRVLSTIYVD--LIRGIPLMV---LAFFIYFGLPGVLGFNI------ 592

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +LGL++ +  + ++LPQA+R 
Sbjct: 593 -PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSLGLSYNRTMQKIILPQAIRI 651

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+  +  +   IYL L   + 
Sbjct: 652 MIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQSTMVYFVIALIYLILITSLT 711

Query: 383 LFMNRLNAKI 392
                L  K+
Sbjct: 712 KLAKNLEKKV 721



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L G   T  L     + A I+G + G   +S  K +  +  +YV++ R IP +
Sbjct: 515 QNNWKQLLHGLWMTILLTLISFVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLM 574

Query: 143 VVIFFLYKSVL 153
           V+ FF+Y  + 
Sbjct: 575 VLAFFIYFGLP 585


>gi|227517724|ref|ZP_03947773.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX0104]
 gi|229546597|ref|ZP_04435322.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX1322]
 gi|229548704|ref|ZP_04437429.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           ATCC 29200]
 gi|255971218|ref|ZP_05421804.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|255973841|ref|ZP_05424427.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256617647|ref|ZP_05474493.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ATCC 4200]
 gi|256854374|ref|ZP_05559738.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256957372|ref|ZP_05561543.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis DS5]
 gi|256959892|ref|ZP_05564063.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Merz96]
 gi|257086118|ref|ZP_05580479.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis D6]
 gi|257089189|ref|ZP_05583550.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257415331|ref|ZP_05592325.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis AR01/DG]
 gi|257421017|ref|ZP_05598007.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293384723|ref|ZP_06630577.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis R712]
 gi|293387465|ref|ZP_06632017.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis S613]
 gi|294781574|ref|ZP_06746911.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300862075|ref|ZP_07108155.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307269814|ref|ZP_07551144.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307276261|ref|ZP_07557389.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307284476|ref|ZP_07564638.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307289545|ref|ZP_07569490.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312900356|ref|ZP_07759667.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312904217|ref|ZP_07763379.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312908578|ref|ZP_07767521.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312910503|ref|ZP_07769348.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312951870|ref|ZP_07770759.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|227074829|gb|EEI12792.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX0104]
 gi|229306170|gb|EEN72166.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           ATCC 29200]
 gi|229308287|gb|EEN74274.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Enterococcus faecalis
           TX1322]
 gi|255962236|gb|EET94712.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|255966713|gb|EET97335.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256597174|gb|EEU16350.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ATCC 4200]
 gi|256709934|gb|EEU24978.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256947868|gb|EEU64500.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis DS5]
 gi|256950388|gb|EEU67020.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis Merz96]
 gi|256994148|gb|EEU81450.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis D6]
 gi|256998001|gb|EEU84521.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257157159|gb|EEU87119.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis ARO1/DG]
 gi|257162841|gb|EEU92801.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291077973|gb|EFE15337.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis R712]
 gi|291083116|gb|EFE20079.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Enterococcus faecalis S613]
 gi|294451352|gb|EFG19817.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295114022|emb|CBL32659.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300848600|gb|EFK76357.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306499506|gb|EFM68878.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306503153|gb|EFM72407.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306507061|gb|EFM76203.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306513924|gb|EFM82526.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310625464|gb|EFQ08747.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630168|gb|EFQ13451.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310632313|gb|EFQ15596.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311289199|gb|EFQ67755.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311292544|gb|EFQ71100.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315025741|gb|EFT37673.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315031474|gb|EFT43406.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315036139|gb|EFT48071.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315145263|gb|EFT89279.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315148141|gb|EFT92157.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315151540|gb|EFT95556.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153184|gb|EFT97200.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315154902|gb|EFT98918.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315161961|gb|EFU05978.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315164648|gb|EFU08665.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315170674|gb|EFU14691.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315578044|gb|EFU90235.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|323479955|gb|ADX79394.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis 62]
 gi|327534349|gb|AEA93183.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus faecalis OG1RF]
 gi|329577603|gb|EGG59036.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 722

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  ++     +     D S  + F      + L    +T+      FV + ++G++  L
Sbjct: 489 IIGTYVKDGNEAKEETADESTFVGFMQNNWKQLLHGLWMTILLTLISFVLALIVGVIFGL 548

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F+         K  + L  +Y+   LI G+P +V   L + ++F  P +  FN       
Sbjct: 549 FS-----VSPIKALRVLSTIYVD--LIRGIPLMV---LAFFIYFGLPGVLGFNI------ 592

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +LGL++ +  + ++LPQA+R 
Sbjct: 593 -PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSLGLSYNRTMQKIILPQAIRI 651

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+  +  +   IYL L   + 
Sbjct: 652 MIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQSTMVYFVIALIYLILITSLT 711

Query: 383 LFMNRLNAKI 392
                L  K+
Sbjct: 712 KLAKNLEKKV 721



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L G   T  L     + A I+G + G   +S  K +  +  +YV++ R IP +
Sbjct: 515 QNNWKQLLHGLWMTILLTLISFVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLM 574

Query: 143 VVIFFLYKSVL 153
           V+ FF+Y  + 
Sbjct: 575 VLAFFIYFGLP 585


>gi|256964404|ref|ZP_05568575.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis HIP11704]
 gi|307272573|ref|ZP_07553826.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|256954900|gb|EEU71532.1| ABC-type amino acid transport/signal transduction system
           [Enterococcus faecalis HIP11704]
 gi|306510858|gb|EFM79875.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
          Length = 722

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  ++     +     D S  + F      + L    +T+      FV + ++G++  L
Sbjct: 489 IIGTYVKDGNEAKEETADESTFVGFMQNNWKQLLHGLWMTILLTLISFVLALIVGVIFGL 548

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F+         K  + L  +Y+   LI G+P +V   L + ++F  P +  FN       
Sbjct: 549 FS-----VSPIKALRVLSTIYVD--LIRGIPLMV---LAFFIYFGLPGVLGFNI------ 592

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I L+   +A+I+EIVR G+ AVP GQMEA+ +LGL++ +  + ++LPQA+R 
Sbjct: 593 -PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQMEASRSLGLSYNRTMQKIILPQAIRI 651

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IP   +Q++  LK++++  A+G  +L+  G  I+ +T Q+  +  +   IYL L   + 
Sbjct: 652 MIPSFINQFVISLKDTTILSAIGLIELLQTGKIIVARTLQSTMVYFVIALIYLILITSLT 711

Query: 383 LFMNRLNAKI 392
                L  K+
Sbjct: 712 KLAKNLEKKV 721



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L G   T  L     + A I+G + G   +S  K +  +  +YV++ R IP +
Sbjct: 515 QNNWKQLLHGLWMTILLTLISFVLALIVGVIFGLFSVSPIKALRVLSTIYVDLIRGIPLM 574

Query: 143 VVIFFLYKSVL 153
           V+ FF+Y  + 
Sbjct: 575 VLAFFIYFGLP 585


>gi|17230679|ref|NP_487227.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Nostoc sp. PCC 7120]
 gi|17132282|dbj|BAB74886.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Nostoc sp. PCC 7120]
          Length = 501

 Score =  195 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 16/261 (6%)

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            ++Y + F+  PP +    LY++  +       +++L F        L           +
Sbjct: 241 SQIYQKWFKVEPPSLPDKSLYENQTNTHKSGSINLILQF--------LPTLLQGALVTIQ 292

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + S VLG++       L+R       +     Y+  F   G P LV I + Y   F  
Sbjct: 293 LTILSTVLGLICGTLI-ALTRLSQFTPARLFARAYVDFF--RGTPLLVQIFMIY---FGI 346

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L Q   +G +     +++  IALS   AA+IAEIVR+G+ ++  GQ EAA +LGL   
Sbjct: 347 PALAQ--QLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIETGQTEAAKSLGLNPW 404

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              RLV+ PQA R ++PPL +++++LLK++SL   +GF +L   G  I+    +A EI  
Sbjct: 405 LTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVADNYRAFEIYA 464

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
               +YL L+++ +  ++RL 
Sbjct: 465 AVAIVYLCLTLLASQVLSRLE 485



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 34/86 (39%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G + T  L     +   I GTL+   RLS         R YV+ FR  P LV
Sbjct: 278 QFLPTLLQGALVTIQLTILSTVLGLICGTLIALTRLSQFTPARLFARAYVDFFRGTPLLV 337

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
            IF +Y  + ++      +      +
Sbjct: 338 QIFMIYFGIPALAQQLGFTFNFDRWV 363


>gi|295689852|ref|YP_003593545.1| hypothetical protein Cseg_2472 [Caulobacter segnis ATCC 21756]
 gi|295431755|gb|ADG10927.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 378

 Score =  195 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 121/374 (32%), Positives = 186/374 (49%), Gaps = 14/374 (3%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R+ +++ Q +    +  +      N   N+  S L+ G  FL   AGF+I +  + Y+  
Sbjct: 13  RLASLAWQGLALAAVLALLALLARNGAANLRASGLASGFDFLGRAAGFDIAETPIAYSPR 72

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S A  +LVG +NT  +   G   A+++G   G    + +  V  + + YVE+FRNIP  
Sbjct: 73  DSNAKVLLVGALNTLKVTGLGATLASLLGLAFGVALRARSGPVRILAQGYVELFRNIPLP 132

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           V++  LY  +    P      +   G   N    L            +   +  L  +++
Sbjct: 133 VLLLVLYSLLAMAPPPRAALDLFGLGFVSNRGLYLPRLDWRWGGGGALAGAALALAALVA 192

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           ++    SR   +          + +F   G   L L+     L  + P    F F+GG  
Sbjct: 193 IWRRAPSRRAAQ----------VLSFGWLGFCGLGLVLSVSGL--EVPRAQGFGFVGGQV 240

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           VSP  ++L   L  YT  +IAE+VR  L A+  GQ EAA ALGL+  +   L+ LPQA+R
Sbjct: 241 VSPPLLALVGGLGLYTGGYIAEVVRGALAAIAPGQAEAAQALGLSPIQTLMLITLPQALR 300

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQTGQAIEIILIWMFIYLSLSIM 380
              PPL SQYLNL KN+SLA+ VG+ DLV+ +GGT++NQTGQAIE + + +  YL+LS+ 
Sbjct: 301 VAAPPLASQYLNLAKNASLAIIVGYPDLVALLGGTVLNQTGQAIETLGLILVFYLALSLS 360

Query: 381 IALFMNRLNAKIAL 394
           I+  +N   A+ A 
Sbjct: 361 ISGLINLWAARQAR 374


>gi|320547054|ref|ZP_08041352.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448291|gb|EFW89036.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 733

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            ++ L+    T+      F  + ++GI+  + A         K  + +  +++   ++ G
Sbjct: 523 YSQLLTGLGTTLSLTLISFAIAMIIGIIFGMMAVA-----PNKVLRTISAIFVD--VVRG 575

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 576 IPLMIVAAFIFW---GIPNLIE-SMTGHQSPINDFLAATIALSLNAGAYIAEIVRGGIEA 631

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 632 VPKGQMEASRSLGISYGKTMQKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQ 691

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   IYL +  ++     RL  ++ 
Sbjct: 692 TGKIIIARNYQSFRMYAILAVIYLVMITLLTRLAKRLEKRLK 733



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A IIG + G   ++ NK++  I  ++V+V R IP ++V  F+
Sbjct: 526 LLTGLGTTLSLTLISFAIAMIIGIIFGMMAVAPNKVLRTISAIFVDVVRGIPLMIVAAFI 585

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   L         NA  ++   V G + ++      
Sbjct: 586 FWGIPNLIESMTGHQSPINDFLAATIAL-------SLNAGAYIAEIVRGGIEAVPKG--- 635

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP  V + L   ++     L     +    +   F +
Sbjct: 636 ---QMEASRSLGISYGKTMQKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQT 692

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 693 GKIIIARNYQSF 704


>gi|319745422|gb|EFV97729.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 727

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS    T+      F  + V+GI+  + +   S      T + + ++++   ++ G
Sbjct: 517 YKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSN-----TLRTISMIFVD--VVRG 569

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 570 IPLMIVAAFIFW---GIPNLIE-SITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 625

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 626 VPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 685

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  ++ 
Sbjct: 686 TGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRLK 727



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +++A   +D+  +     ++Y   +L G   T  L       A +IG + G   +S +  
Sbjct: 497 NDKAAKPVDESTILGLISNNYKQ-LLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNT 555

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  ++V+V R IP ++V  F++  + +++                   LS       
Sbjct: 556 LRTISMIFVDVVRGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGG--- 612

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   +++  IV        S     +  ++L + Y  T     LP  V + L   +
Sbjct: 613 --------AYIAEIVRGGIEAVPSG--QMEASRSLGISYGKTMQKVILPQAVRLMLPNFI 662

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +     L     +    +   F +  I ++    +F
Sbjct: 663 NQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 698


>gi|76788581|ref|YP_330104.1| polar amino acid ABC transporter permease/substrate-binding protein
           [Streptococcus agalactiae A909]
 gi|76563638|gb|ABA46222.1| polar amino acid uptake (PAAT) family ABC transporter,
           substrate-binding/permease protein [Streptococcus
           agalactiae A909]
          Length = 727

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS    T+      F  + V+GI+  + +   S      T + + ++++   ++ G
Sbjct: 517 YKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSN-----TLRTISMIFVD--VVRG 569

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 570 IPLMIVAAFIFW---GIPNLIE-SITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 625

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 626 VPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 685

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  ++ 
Sbjct: 686 TGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRLK 727



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 13/198 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+    +L G   T  L       A +IG + G   +S +  +  I  ++V+V R IP +
Sbjct: 514 SNNYKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNTLRTISMIFVDVVRGIPLM 573

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V  F++  + +++                   LS               +++  IV   
Sbjct: 574 IVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGG-----------AYIAEIVRGG 622

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                S     +  ++L + Y  T     LP  V + L   ++     L     +    +
Sbjct: 623 IEAVPSG--QMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGL 680

Query: 263 SPEFMSLYIALSCYTAAF 280
              F +  I ++    +F
Sbjct: 681 VELFQTGKIIIARNYQSF 698


>gi|22537609|ref|NP_688460.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|25011575|ref|NP_735970.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae NEM316]
 gi|76797646|ref|ZP_00779916.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae 18RS21]
 gi|77405223|ref|ZP_00782321.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae H36B]
 gi|77414125|ref|ZP_00790292.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 515]
 gi|22534494|gb|AAN00333.1|AE014259_4 glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|24413114|emb|CAD47192.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae NEM316]
 gi|76587007|gb|EAO63495.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus agalactiae 18RS21]
 gi|77159836|gb|EAO70980.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 515]
 gi|77176225|gb|EAO78996.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae H36B]
          Length = 727

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS    T+      F  + V+GI+  + +   S      T + + ++++   ++ G
Sbjct: 517 YKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSN-----TLRTISMIFVD--IVRG 569

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 570 IPLMIVAAFIFW---GIPNLIE-SITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 625

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 626 VPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 685

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  ++ 
Sbjct: 686 TGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRLK 727



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +++A   +D+  +     ++Y   +L G   T  L       A +IG + G   +S +  
Sbjct: 497 NDKAAKPVDESTILGLISNNYKQ-LLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNT 555

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  ++V++ R IP ++V  F++  + +++                   LS       
Sbjct: 556 LRTISMIFVDIVRGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGG--- 612

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   +++  IV        S     +  ++L + Y  T     LP  V + L   +
Sbjct: 613 --------AYIAEIVRGGIEAVPSG--QMEASRSLGISYGKTMQKVILPQAVRLMLPNFI 662

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +     L     +    +   F +  I ++    +F
Sbjct: 663 NQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 698


>gi|75910090|ref|YP_324386.1| amino acid ABC transporter permease [Anabaena variabilis ATCC
           29413]
 gi|75703815|gb|ABA23491.1| L-arginine ABC transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-arginine-binding
           protein / L-histidine-binding protein / L-histidine ABC
           transporter membrane protein / L-lysine-binding protein
           / L-lysine ABC transporter membrane protein /
           L-glutamine-binding protein [Anabaena variabilis ATCC
           29413]
          Length = 501

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 16/261 (6%)

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            ++Y + F+  PP +    LY++  +        ++L F        L           +
Sbjct: 241 SQIYQKWFKAEPPSLPDKSLYENQNNTRKSSSIKLILQF--------LPTLLQGALVTIQ 292

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + S +LG++       L R       + L   Y+  F   G P LV I + Y   F  
Sbjct: 293 LTILSTLLGLICGTLI-ALIRLSQFTPARLLARAYVDFF--RGTPLLVQIFMIY---FGI 346

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L Q   +G +     +++  IALS   AA+IAEIVR+G+ ++  GQ EAA +LGL   
Sbjct: 347 PALAQ--QLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIEIGQTEAAKSLGLNPW 404

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              RLV+ PQA R ++PPL +++++LLK++SL   +GF +L   G  I+    +A EI  
Sbjct: 405 LTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAVIGFEELFRKGQLIVADNYRAFEIYA 464

Query: 369 IWMFIYLSLSIMIALFMNRLN 389
               +YL L+++ +  ++RL 
Sbjct: 465 AVAIVYLCLTLLASQVLSRLE 485



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 70/199 (35%), Gaps = 8/199 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G + T  L     +   I GTL+   RLS       + R YV+ FR  P LV
Sbjct: 278 QFLPTLLQGALVTIQLTILSTLLGLICGTLIALIRLSQFTPARLLARAYVDFFRGTPLLV 337

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG------ 197
            IF +Y  + ++      +      +             +    +  + S  +G      
Sbjct: 338 QIFMIYFGIPALAQQLGFTFNFDRWVAGVIALSVNAAAYIAEIVRAGIQSIEIGQTEAAK 397

Query: 198 -IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            + L+ + T     F +   + LP L      +    +LV + + ++  F K  L   + 
Sbjct: 398 SLGLNPWLTMRLVIFPQAFRRMLPPLGNEFISLLKDTSLVAV-IGFEELFRKGQLIVADN 456

Query: 257 IGGSTVSPEFMSLYIALSC 275
                +      +Y+ L+ 
Sbjct: 457 YRAFEIYAAVAIVYLCLTL 475


>gi|77411077|ref|ZP_00787431.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae CJB111]
 gi|77162900|gb|EAO73857.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae CJB111]
          Length = 727

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS    T+      F  + V+GI+  + +   S      T + + ++++   ++ G
Sbjct: 517 YKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSN-----TLRTISMIFVD--VVRG 569

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 570 IPLMIVAAFIFW---GIPNLIE-SITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 625

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 626 VPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 685

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  ++ 
Sbjct: 686 TGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRLK 727



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +++A   +D+  +     ++Y   +L G   T  L       A +IG + G   +S +  
Sbjct: 497 NDKAAKPVDESTILGLISNNYKQ-LLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNT 555

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  ++V+V R IP ++V  F++  + +++                   LS       
Sbjct: 556 LRTISMIFVDVVRGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGG--- 612

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   +++  IV        S     +  ++L + Y  T     LP  V + L   +
Sbjct: 613 --------AYIAEIVRGGIEAVPSG--QMEASRSLGISYGKTMQKVILPQAVRLMLPNFI 662

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +     L     +    +   F +  I ++    +F
Sbjct: 663 NQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 698


>gi|14211227|gb|AAK57382.1|AF372619_1 GlnP [Streptococcus agalactiae COH1]
          Length = 727

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS    T+      F  + V+GI+  + +   S      T + + ++++   ++ G
Sbjct: 517 YKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSN-----TLRTISMIFVD--IVRG 569

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 570 IPLMIVAAFIFW---GIPNLIE-SITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 625

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 626 VPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 685

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  ++ 
Sbjct: 686 TGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRLK 727



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +++A   +D+  +     ++Y   +L G   T  L       A +IG + G   +S +  
Sbjct: 497 NDKAAKPVDESTILGLISNNYKQ-LLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNT 555

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  ++V++ R IP ++V  F++  + +++                   LS       
Sbjct: 556 LRTISMIFVDIVRGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGG--- 612

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   +++  IV        S     +  ++L + Y  T     LP  V + L   +
Sbjct: 613 --------AYIAEIVRGGIEAVPSG--QMEASRSLGISYGKTMQKVILPQAVRLMLPNFI 662

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +     L     +    +   F +  I ++    +F
Sbjct: 663 NQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 698


>gi|171779932|ref|ZP_02920836.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281280|gb|EDT46715.1| hypothetical protein STRINF_01719 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 743

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 13/253 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVL 200
           +V  +L  S               +G+  NN    LS    T+      F  + V+GI+ 
Sbjct: 502 IVSKYLGSSDDKKSTSSSVDETTIWGLIKNNYSQLLSGLGTTLSLTLISFAIAMVIGIIF 561

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            + A         K  + +  +++   ++ G+P +++ A  +      P L + +  G  
Sbjct: 562 GMMAVA-----PNKVLRTISAVFVD--VVRGIPLMIVAAFIFW---GIPNLIE-SMTGHQ 610

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           +   +F++  IALS    A+IAEIVR G+ AVP+GQMEA+ +LG+++ K  + V+LPQA+
Sbjct: 611 SPINDFLAATIALSLNAGAYIAEIVRGGIEAVPKGQMEASRSLGISYGKTMKKVILPQAV 670

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R ++P   +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  +
Sbjct: 671 RVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLVIITL 730

Query: 381 IALFMNRLNAKIA 393
           +     RL  ++ 
Sbjct: 731 LTRLAKRLEKRLK 743



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A +IG + G   ++ NK++  I  V+V+V R IP ++V  F+
Sbjct: 536 LLSGLGTTLSLTLISFAIAMVIGIIFGMMAVAPNKVLRTISAVFVDVVRGIPLMIVAAFI 595

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   L         NA  ++   V G + ++      
Sbjct: 596 FWGIPNLIESMTGHQSPINDFLAATIAL-------SLNAGAYIAEIVRGGIEAVPKG--- 645

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP  V + L   ++     L     +    +   F +
Sbjct: 646 ---QMEASRSLGISYGKTMKKVILPQAVRVMLPNFINQFVISLKDTTIVSAIGLVELFQT 702

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 703 GKIIIARNYQSF 714


>gi|24379263|ref|NP_721218.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans UA159]
 gi|24377179|gb|AAN58524.1|AE014921_9 putative glutamine ABC transporter, permease protein [Streptococcus
           mutans UA159]
          Length = 728

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 113/209 (54%), Gaps = 7/209 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + SF L +++ +    +S     KT + +  +++   ++ G+P +++ A  +  
Sbjct: 527 TTLSLVILSFALAMIVGILFGMMS-VSPYKTLRIIASIFVD--VVRGIPLMIVAAFIFW- 582

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L + +  G  +   +F++  IAL+    A+IAEIVR G+ AVP GQMEA+ +LG
Sbjct: 583 --GIPNLIE-SITGHQSPINDFVAGTIALTLNGGAYIAEIVRGGIEAVPSGQMEASRSLG 639

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++++   + ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ 
Sbjct: 640 ISYKTTMKRIILPQAFKLMLPNFINQFVISLKDTTIISAIGLIELFQAGKIIIARNYQSF 699

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  I   +YL +  ++     RL  +I 
Sbjct: 700 RMYAILAIMYLVIITLLTRLAKRLEKRIK 728



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 13/198 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+    +L G   T  L       A I+G L G   +S  K +  I  ++V+V R IP +
Sbjct: 515 SNNYKQLLSGLGTTLSLVILSFALAMIVGILFGMMSVSPYKTLRIIASIFVDVVRGIPLM 574

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V  F++  + +++                   L+               +++  IV   
Sbjct: 575 IVAAFIFWGIPNLIESITGHQSPINDFVAGTIALTLNGG-----------AYIAEIVRGG 623

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                S     +  ++L + Y +T     LP    + L   ++     L     I    +
Sbjct: 624 IEAVPSG--QMEASRSLGISYKTTMKRIILPQAFKLMLPNFINQFVISLKDTTIISAIGL 681

Query: 263 SPEFMSLYIALSCYTAAF 280
              F +  I ++    +F
Sbjct: 682 IELFQAGKIIIARNYQSF 699


>gi|116628198|ref|YP_820817.1| ABC-type amino acid transport system, periplasmic and permease
           components [Streptococcus thermophilus LMD-9]
 gi|116101475|gb|ABJ66621.1| ABC-type amino acid transport system, periplasmic and permease
           components [Streptococcus thermophilus LMD-9]
          Length = 736

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L    +T+      F  + ++GI+  + A         KT + +  +++   ++ G
Sbjct: 526 YKQLLQGLGITLGLTLLSFAIAMIIGIIFGMMAVA-----PNKTLRVISQIFVD--VVRG 578

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  Y      P L + N  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 579 IPLMIVAAFIYW---GIPNLIE-NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 634

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+ +    R ++LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 635 VPIGQMEASRSLGVPYNTTMRKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 694

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   IYL +   +     RL  ++ 
Sbjct: 695 TGKIIIARNYQSFRMYAILAIIYLVIITCLTKLAKRLEKRLK 736



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 13/175 (7%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A IIG + G   ++ NK +  I +++V+V R IP ++V  F+Y  + +++         
Sbjct: 546 IAMIIGIIFGMMAVAPNKTLRVISQIFVDVVRGIPLMIVAAFIYWGIPNLIENITGHQSP 605

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                     LS             V   +  + +             +  ++L + Y +
Sbjct: 606 INDFVAATIALSLNGG---AYIAEIVRGGIEAVPIG----------QMEASRSLGVPYNT 652

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T     LP  V + L   ++     L     +    +   F +  I ++    +F
Sbjct: 653 TMRKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 707


>gi|319946946|ref|ZP_08021180.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319746994|gb|EFV99253.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 754

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 116/220 (52%), Gaps = 11/220 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS   +T+      F  + V+GI+  +F+         K  +    +++   +I G
Sbjct: 544 YKQLLSGLGVTIALALLSFAIAMVIGIIFGMFS-----VSPYKWLRWTAEIFVD--VIRG 596

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P ++L A  +      P L + +  G  +   +F++  IALS   AA+IAEIVR G+ A
Sbjct: 597 IPLMILAAFIFW---GIPNLIE-SMTGHQSPINDFLAGTIALSLNAAAYIAEIVRGGIQA 652

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L  
Sbjct: 653 VPAGQMEASRSLGISYSKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQ 712

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  II +  Q+ ++  I    YL +  ++  F  RL  +
Sbjct: 713 TGKIIIARNYQSFKMYAILAVFYLVIITLLTRFAKRLEKR 752



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 66/192 (34%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + W   ++V+V R IP +++  F+
Sbjct: 547 LLSGLGVTIALALLSFAIAMVIGIIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFI 606

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   LS               +++  IV        +
Sbjct: 607 FWGIPNLIESMTGHQSPINDFLAGTIALSLN-----------AAAYIAEIVRGGIQAVPA 655

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP    + L   ++     L     +    +   F +
Sbjct: 656 G--QMEASRSLGISYSKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 713

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 714 GKIIIARNYQSF 725


>gi|16330176|ref|NP_440904.1| glutamine ABC transporter [Synechocystis sp. PCC 6803]
 gi|1652664|dbj|BAA17584.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Synechocystis sp. PCC 6803]
          Length = 530

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 10/265 (3%)

Query: 130 RVYVEVF--RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +Y + F  +N P L ++       +                                  
Sbjct: 259 AIYEKWFGEKNPPFLPLVAPSLVGKVGTAQSLTERSQANPNDNFLITLFRNLFKGSILTV 318

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            +  FS   G++       ++     K  + +  +Y+  F   G P LV + + Y   F 
Sbjct: 319 LLTAFSVFFGLIGGTGV-AIALISDIKPLQLIFRIYVEFF--RGTPMLVQLFIIY---FG 372

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P L  F  IG       F +  IALS   AA++AEI+R G+ ++ +GQ EA  +LG++ 
Sbjct: 373 LPAL--FKEIGLGITIDRFPAAIIALSLNVAAYLAEIIRGGIQSIDQGQWEACESLGMSP 430

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  + V+ PQA R I+PPL ++++ L+K++SL   +GF +L   G  I+  T +A E+ 
Sbjct: 431 WQTMKEVIFPQAFRRILPPLGNEFITLIKDTSLTAVIGFQELFREGQLIVATTYRAFEVY 490

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
           +    +YL L+ + +     L   +
Sbjct: 491 IAVALVYLLLTTISSFVFKWLENYM 515



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +  G + T  L    +    I GT V    +S  K +  I R+YVE FR  P LV
Sbjct: 305 TLFRNLFKGSILTVLLTAFSVFFGLIGGTGVAIALISDIKPLQLIFRIYVEFFRGTPMLV 364

Query: 144 VIFFLYKSVLSVLPIP 159
            +F +Y  + ++    
Sbjct: 365 QLFIIYFGLPALFKEI 380


>gi|290580730|ref|YP_003485122.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans NN2025]
 gi|254997629|dbj|BAH88230.1| putative glutamine ABC transporter, permease protein [Streptococcus
           mutans NN2025]
          Length = 728

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 113/209 (54%), Gaps = 7/209 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + SF L +++ +    +S     KT + +  +++   ++ G+P +++ A  +  
Sbjct: 527 TTLSLAILSFALAMIVGILFGMMS-VSPYKTLRIIASIFVD--VVRGIPLMIVAAFIFW- 582

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L + +  G  +   +F++  IAL+    A+IAEIVR G+ AVP GQMEA+ +LG
Sbjct: 583 --GIPNLIE-SITGHQSPINDFVAGTIALTLNGGAYIAEIVRGGIEAVPSGQMEASRSLG 639

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++++   + ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ 
Sbjct: 640 ISYKTTMKRIILPQAFKLMLPNFINQFVISLKDTTIISAIGLIELFQAGKIIIARNYQSF 699

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  I   +YL +  ++     RL  +I 
Sbjct: 700 RMYAILAIMYLVIITLLTRLAKRLEKRIK 728



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 13/198 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+    +L G   T  LA      A I+G L G   +S  K +  I  ++V+V R IP +
Sbjct: 515 SNNYKQLLSGLGTTLSLAILSFALAMIVGILFGMMSVSPYKTLRIIASIFVDVVRGIPLM 574

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V  F++  + +++                   L+               +++  IV   
Sbjct: 575 IVAAFIFWGIPNLIESITGHQSPINDFVAGTIALTLNGG-----------AYIAEIVRGG 623

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                S     +  ++L + Y +T     LP    + L   ++     L     I    +
Sbjct: 624 IEAVPSG--QMEASRSLGISYKTTMKRIILPQAFKLMLPNFINQFVISLKDTTIISAIGL 681

Query: 263 SPEFMSLYIALSCYTAAF 280
              F +  I ++    +F
Sbjct: 682 IELFQAGKIIIARNYQSF 699


>gi|55821477|ref|YP_139919.1| glutamine ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823406|ref|YP_141847.1| glutamine ABC transporter permease [Streptococcus thermophilus
           CNRZ1066]
 gi|55737462|gb|AAV61104.1| glutamine ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739391|gb|AAV63032.1| glutamine ABC transporter permease protein [Streptococcus
           thermophilus CNRZ1066]
 gi|312278815|gb|ADQ63472.1| Glutamine ABC transporter permease protein [Streptococcus
           thermophilus ND03]
          Length = 736

 Score =  193 bits (490), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L    +T+      F  + ++GI+  + A         KT + +  +++   ++ G
Sbjct: 526 YKQLLQGLGITLGLTLLSFAIAMIIGIIFGMMAVA-----PNKTLRVISQIFVD--VVRG 578

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  Y      P L + N  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 579 IPLMIVAAFIYW---GIPNLIE-NITGHQSPINNFVAATIALSLNGGAYIAEIVRGGIEA 634

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+ +    R V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 635 VPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 694

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   IYL +   +     RL  ++ 
Sbjct: 695 TGKIIIARNYQSFRMYAILAIIYLVIITCLTKLAKRLEKRLK 736



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 13/175 (7%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A IIG + G   ++ NK +  I +++V+V R IP ++V  F+Y  + +++         
Sbjct: 546 IAMIIGIIFGMMAVAPNKTLRVISQIFVDVVRGIPLMIVAAFIYWGIPNLIENITGHQSP 605

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                     LS             V   +  + +             +  ++L + Y +
Sbjct: 606 INNFVAATIALSLNGG---AYIAEIVRGGIEAVPIG----------QMEASRSLGVPYNT 652

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T     LP  V + L   ++     L     +    +   F +  I ++    +F
Sbjct: 653 TMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 707


>gi|228477049|ref|ZP_04061687.1| glutamine ABC transporter permease protein [Streptococcus
           salivarius SK126]
 gi|228251068|gb|EEK10239.1| glutamine ABC transporter permease protein [Streptococcus
           salivarius SK126]
          Length = 732

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L    +T+      F  + ++G++  + A         KT + +  +++   ++ G
Sbjct: 522 YKQLLQGLGITLGLTLLSFAIAMIIGVIFGMMAVA-----PNKTLRVISQVFVD--VVRG 574

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  Y      P L + N  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 575 IPLMIVAAFIYW---GIPNLIE-NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 630

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+ +    R V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 631 VPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 690

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +   +     RL  ++ 
Sbjct: 691 TGKIIIARNYQSFRMYAILAILYLVIITCLTKLAKRLEKRLK 732



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 13/175 (7%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A IIG + G   ++ NK +  I +V+V+V R IP ++V  F+Y  + +++         
Sbjct: 542 IAMIIGVIFGMMAVAPNKTLRVISQVFVDVVRGIPLMIVAAFIYWGIPNLIENITGHQSP 601

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                     LS             V   +  + +             +  ++L + Y +
Sbjct: 602 INDFVAATIALSLNGG---AYIAEIVRGGIEAVPIG----------QMEASRSLGVPYNT 648

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T     LP  V + L   ++     L     +    +   F +  I ++    +F
Sbjct: 649 TMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 703


>gi|218135088|ref|ZP_03463892.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990473|gb|EEC56484.1| hypothetical protein BACPEC_02993 [Bacteroides pectinophilus ATCC
           43243]
          Length = 508

 Score =  192 bits (488), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 119/231 (51%), Gaps = 16/231 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---T 226
           F+ +    +    +     I +F+ ++GIVL  F   + R  H+K G    L  I     
Sbjct: 291 FVKDSRWEYLIKGLGNTLLITLFAIIIGIVLG-FLIAIVRTNHDKNGGLTILNAICKVYL 349

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G P +V + + Y + F             S  + + +   IA    +AA++AE+VR
Sbjct: 350 TIVRGTPVMVQLLIIYYVIF------------ASVNTSKILVAVIAFGLNSAAYVAEVVR 397

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++AV  GQ EA  +LGL + +  + ++LPQA+++I+P L +++++LLK +S++  +G 
Sbjct: 398 SGIMAVDNGQFEAGRSLGLNYSQTMKSIILPQAVKNILPALGNEFISLLKETSISGYIGL 457

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL   G  I + T +    ++    IYL + ++++  + RL  ++   E+
Sbjct: 458 MDLTKGGDIIRSITYEPFMPLIAVAIIYLVIVMILSYGVGRLERRLKKNER 508



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----- 123
           G  I +         S    ++ G  NT  +    +I   ++G L+   R + +K     
Sbjct: 280 GGSISEKFNDNFVKDSRWEYLIKGLGNTLLITLFAIIIGIVLGFLIAIVRTNHDKNGGLT 339

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           ++  IC+VY+ + R  P +V +  +Y  + + 
Sbjct: 340 ILNAICKVYLTIVRGTPVMVQLLIIYYVIFAS 371


>gi|306833827|ref|ZP_07466952.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424021|gb|EFM27162.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 739

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/357 (22%), Positives = 154/357 (43%), Gaps = 29/357 (8%)

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIG-- 111
             N +    +LSE A  E    +  +   S+   ++  G ++      + ++ A   G  
Sbjct: 395 AKNGTSSYTWLSEHAD-EYGYTLKAFDEASTMYDSLNSGSIDALMDDEAVLLYAIQQGRD 453

Query: 112 ------------TLVGAGRLSANKLVAWICRVYVEVFR-NIPPLVVIFFLYKSVLSVLPI 158
                             + S  +L+         +        +V  +L  S  S    
Sbjct: 454 FETPIAGEKSGEYGFAVSKGSNPELIEMFNNGLAALVESGEYDEIVNKYLDTSDSSSSSS 513

Query: 159 PDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                   +G+  NN    L+    T+      F  + V+GI+  + A         K  
Sbjct: 514 STVDETTIWGLLKNNYSQLLAGLGKTLSLTLISFAIAMVIGIIFGMMAVA-----PNKVL 568

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +  +++   ++ G+P +++ A  +      P L + +  G  +   +F++  IALS  
Sbjct: 569 RTISAVFVD--IVRGIPLMIVAAFIFW---GIPNLLE-SITGRQSPINDFVAATIALSLN 622

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+IAEIVR G+ AVP+GQMEA+ +LG+++ K  + ++LPQA+R ++P   +Q++  LK
Sbjct: 623 GGAYIAEIVRGGIEAVPQGQMEASRSLGISYGKTMQKIILPQAIRLMLPNFINQFVISLK 682

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     RL  ++ 
Sbjct: 683 DTTIVSAIGLVELFQTGKIIIARNYQSFRVYAILAVIYLVMITLLTRLAKRLEKRLK 739


>gi|222153290|ref|YP_002562467.1| glutamine ABC transporter glutamine-binding protein/permease
           [Streptococcus uberis 0140J]
 gi|222114103|emb|CAR42546.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus uberis 0140J]
          Length = 724

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 23/214 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
                F  + ++GI+  + A       R++        + +PL+ ++ F+ +G+P L+  
Sbjct: 527 LTLISFAIAMIIGIIFGMMAVSPSKGMRIASSIFVDVVRGIPLMIVAAFIFWGVPNLIES 586

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              +Q   +                 +F++  IALS    A+IAEIVR G+ A+P GQME
Sbjct: 587 MTGHQSPIN-----------------DFLAATIALSLNGGAYIAEIVRGGIEAIPAGQME 629

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A+ +LG+ +R   + ++LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II 
Sbjct: 630 ASRSLGIPYRVTMKKIILPQAVKVMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIA 689

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 690 RNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 723



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 13/198 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+    +L G   T  L       A IIG + G   +S +K +     ++V+V R IP +
Sbjct: 511 SNNYKQLLAGLCTTLSLTLISFAIAMIIGIIFGMMAVSPSKGMRIASSIFVDVVRGIPLM 570

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V  F++  V +++                   LS               +++  IV   
Sbjct: 571 IVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG-----------AYIAEIVRGG 619

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                +     +  ++L + Y  T     LP  V + L   ++     L     +    +
Sbjct: 620 IEAIPAG--QMEASRSLGIPYRVTMKKIILPQAVKVMLPNFINQFVISLKDTTIVSAIGL 677

Query: 263 SPEFMSLYIALSCYTAAF 280
              F +  I ++    +F
Sbjct: 678 VELFQTGKIIIARNYQSF 695


>gi|125718174|ref|YP_001035307.1| arginine/histidine ABC transporter permease [Streptococcus
           sanguinis SK36]
 gi|125498091|gb|ABN44757.1| Arginine/histidine ABC transporter, permease component, putative
           [Streptococcus sanguinis SK36]
          Length = 722

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 512 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 564

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 565 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 620

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 621 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 680

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 681 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 722



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 515 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 574

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 575 FWGIPNLIESMTGQQSP 591


>gi|328946378|gb|EGG40519.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 729

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|322373408|ref|ZP_08047944.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C150]
 gi|321278450|gb|EFX55519.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C150]
          Length = 731

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            ++ L    +T+      F  + ++G++  + A         KT + +  +++   ++ G
Sbjct: 521 YHQLLQGLGITIGLTLLSFAIAMIIGVIFGMMAVA-----PNKTLRVISQVFVD--VVRG 573

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  Y      P L + N  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 574 IPLMIVAAFIYW---GIPNLIE-NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 629

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+ +    R V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 630 VPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 689

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +   +     RL  ++ 
Sbjct: 690 TGKIIIARNYQSFRMYAILAILYLVIITFLTKLAKRLEKRLK 731



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A IIG + G   ++ NK +  I +V+V+V R IP ++V  F+
Sbjct: 524 LLQGLGITIGLTLLSFAIAMIIGVIFGMMAVAPNKTLRVISQVFVDVVRGIPLMIVAAFI 583

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  + +++                   LS             V   +  + +        
Sbjct: 584 YWGIPNLIENITGHQSPINDFVAATIALSLNGG---AYIAEIVRGGIEAVPIG------- 633

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y +T     LP  V + L   ++     L     +    +   F +
Sbjct: 634 ---QMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQT 690

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 691 GKIIIARNYQSF 702


>gi|325695929|gb|EGD37820.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 729

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|325694667|gb|EGD36574.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 729

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|125624721|ref|YP_001033204.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|62421458|gb|AAX82492.1| GlnP [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493529|emb|CAL98510.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071518|gb|ADJ60918.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 714

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 123/245 (50%), Gaps = 25/245 (10%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSR----- 209
                     FG+  NN       L +     +  F+ + ++GI+  LF+   S+     
Sbjct: 487 IQSSAKENTFFGILQNNWEQIGRGLLVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTI 546

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              +    +++PLL ++ F+ +G+P L+ I   +Q   +                 EF +
Sbjct: 547 ARIYVDLNRSIPLLVLTIFIFYGIPNLLQIITGHQSPLN-----------------EFTA 589

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP L 
Sbjct: 590 GVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLI 649

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+++L   +G  +L+  G  I+ +  QA  +  +   +Y+ + + +     R+
Sbjct: 650 NQFIITLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYMIVLLFLMWVGRRV 709

Query: 389 NAKIA 393
             ++ 
Sbjct: 710 EKRMK 714



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 22/135 (16%)

Query: 44  CVNNVYNNMEKSN---------LSLGIGFLSERAG----FEIDQGIVPYTSDSSYATAIL 90
             NN   N+  +          L+     +   A     F I Q         +    I 
Sbjct: 458 MFNNGLANLRANGEYDKIIDKYLASDTKTIQSSAKENTFFGILQ---------NNWEQIG 508

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G + T  LA    I A I+G + G   ++ +K++  I R+YV++ R+IP LV+  F++ 
Sbjct: 509 RGLLVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDLNRSIPLLVLTIFIFY 568

Query: 151 SVLSVLPIPDHSIVL 165
            + ++L I       
Sbjct: 569 GIPNLLQIITGHQSP 583


>gi|306831687|ref|ZP_07464844.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|261411856|gb|ACX81324.1| Sbs9 [Streptococcus gallolyticus subsp. gallolyticus]
 gi|304426112|gb|EFM29227.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 745

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            ++ LS    T+      F  + V+GI+  + A         K  + +  +++   ++ G
Sbjct: 535 YSQLLSGLGKTLSLTLISFAIAMVIGIIFGMMAVA-----PNKVLRTISAVFVD--IVRG 587

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 588 IPLMIVAAFIFW---GIPNLLE-SITGKQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 643

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQMEA+ +LG+++ K  + ++LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 644 VPQGQMEASRSLGISYSKTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 703

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   IYL +  ++     RL  ++ 
Sbjct: 704 TGKIIIARNYQSFRMYAILAVIYLVIITLLTRLAKRLEKRLK 745



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A +IG + G   ++ NK++  I  V+V++ R IP ++V  F+
Sbjct: 538 LLSGLGKTLSLTLISFAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFI 597

Query: 149 Y 149
           +
Sbjct: 598 F 598


>gi|323351404|ref|ZP_08087060.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322122628|gb|EFX94339.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 729

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|325687630|gb|EGD29651.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 729

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|296876379|ref|ZP_06900431.1| arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Streptococcus parasanguinis ATCC 15912]
 gi|296432669|gb|EFH18464.1| arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Streptococcus parasanguinis ATCC 15912]
          Length = 754

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 12/251 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     S          +   +  N + L          A + F  + V+G++  
Sbjct: 514 ILDKYLKSDSKSTSSTAVDETTIWGLLQNNYKQLLSGLGVTLALALLSFAIAMVIGVIFG 573

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K  +    +++   +I G+P ++L A  +      P L + +  G  +
Sbjct: 574 MFS-----VSPYKWLRWTAEIFVD--VIRGIPLMILAAFIFW---GIPNLIE-SVTGHQS 622

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 623 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPIGQMEASRSLGISYGKTMRKIILPQATK 682

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 683 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAVFYLVIITLL 742

Query: 382 ALFMNRLNAKI 392
             F  +L  K+
Sbjct: 743 TRFAKKLEKKV 753



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + W   ++V+V R IP +++  F+
Sbjct: 547 LLSGLGVTLALALLSFAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFI 606

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   L         NA  ++   V G + ++      
Sbjct: 607 FWGIPNLIESVTGHQSPINDFVAGTIAL-------SLNAAAYIAEIVRGGIQAVPIG--- 656

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP    + L   ++     L     +    +   F +
Sbjct: 657 ---QMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 713

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 714 GKIIIARNYQSF 725


>gi|325978626|ref|YP_004288342.1| amino acid ABC transporter amino acid-binding/permease
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325178554|emb|CBZ48598.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 745

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            ++ LS    T+      F  + V+GI+  + A         K  + +  +++   ++ G
Sbjct: 535 YSQLLSGLGKTLSLTLISFAIAMVIGIIFGMMAVA-----PNKVLRTISAVFVD--IVRG 587

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 588 IPLMIVAAFIFW---GIPNLLE-SITGKQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 643

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQMEA+ +LG+++ K  + ++LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 644 VPQGQMEASRSLGISYSKTMQKIILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 703

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   IYL +  ++     RL  ++ 
Sbjct: 704 TGKIIIARNYQSFRMYAILAVIYLVMITLLTRLAKRLEKRLK 745



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A +IG + G   ++ NK++  I  V+V++ R IP ++V  F+
Sbjct: 538 LLSGLGKTLSLTLISFAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFI 597

Query: 149 Y 149
           +
Sbjct: 598 F 598


>gi|319939264|ref|ZP_08013627.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV]
 gi|319811660|gb|EFW07936.1| amino acid ABC transporter [Streptococcus anginosus 1_2_62CV]
          Length = 727

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS   +T+      F  + V+GI+  +F+         KT + +  +++   +I G
Sbjct: 517 YKQLLSGLGITIALALLSFAIAMVIGIIFGMFS-----VSPVKTLRVISEIFVD--VIRG 569

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P ++L A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 570 IPLMILAAFIFW---GIPNLIE-SMTGHQSPINDFVAGTIALSLNAGAYIAEIVRGGIQA 625

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L  
Sbjct: 626 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQ 685

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+ ++  I    YL +  ++     RL  +I 
Sbjct: 686 TGKIIIARNYQSFKMYAILAVFYLIIITLLTRLAKRLEKRIK 727



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 520 LLSGLGITIALALLSFAIAMVIGIIFGMFSVSPVKTLRVISEIFVDVIRGIPLMILAAFI 579

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   L         NA  ++   V G + ++      
Sbjct: 580 FWGIPNLIESMTGHQSPINDFVAGTIAL-------SLNAGAYIAEIVRGGIQAVPVG--- 629

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP    I L   ++     L     +    +   F +
Sbjct: 630 ---QMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQT 686

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 687 GKIIIARNYQSF 698


>gi|327470838|gb|EGF16294.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 729

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|327460181|gb|EGF06518.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 729

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + ++GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMIIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A IIG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMIIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|324992737|gb|EGC24657.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
          Length = 729

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 6/126 (4%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS----SYATAILVGFVNTFWL 99
             NN   N+++S        L +    E+ +  V  ++      +    +L G   T  L
Sbjct: 475 MFNNGLANLKESGKYQ--EILDKYLASEVKESTVDESTIWGLLQNNYQELLKGLGVTIAL 532

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A      A +IG + G   +S  K + WI  ++V+V R IP ++V  F++  + +++   
Sbjct: 533 ALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLIESM 592

Query: 160 DHSIVL 165
                 
Sbjct: 593 TGQQSP 598


>gi|324990984|gb|EGC22918.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 729

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|218438819|ref|YP_002377148.1| polar amino acid ABC transporter inner membrane protein [Cyanothece
           sp. PCC 7424]
 gi|218171547|gb|ACK70280.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7424]
          Length = 513

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 16/268 (5%)

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            +Y + F   PP + +        +    P    V  F                     +
Sbjct: 252 SIYEQWFGISPPELPLSAPSLDTENQDFNPTVFYVNLF---------RNLFRGAVITVIL 302

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
             FS   G++       L+     +  + L  +Y+  F   G P LV + + Y   F  P
Sbjct: 303 TAFSVFFGLIGGTLV-ALALISPYQILRLLFRIYVDFF--RGTPMLVQLFIIY---FGLP 356

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L Q  ++G       F +  +ALS   AA++AEI+R G+ ++ +GQ EA  +LG+T  +
Sbjct: 357 ALFQ-QYLGIEWSLDRFPAAVMALSLNVAAYLAEIIRGGIQSIDKGQWEACESLGMTPFQ 415

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + V+ PQA R I+PPL ++++ L+K++SL   +GF +L   G  I+  T +A E+ + 
Sbjct: 416 TMQDVIFPQAFRRILPPLGNEFITLIKDTSLTAIIGFQELFREGQLIVAVTYKAFEVYIA 475

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +YL L+ + ++    L   +   EK
Sbjct: 476 VALVYLILTTLSSIAFKWLETAMNPLEK 503



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 34/73 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G V T  L    +    I GTLV    +S  +++  + R+YV+ FR  P LV +
Sbjct: 289 FRNLFRGAVITVILTAFSVFFGLIGGTLVALALISPYQILRLLFRIYVDFFRGTPMLVQL 348

Query: 146 FFLYKSVLSVLPI 158
           F +Y  + ++   
Sbjct: 349 FIIYFGLPALFQQ 361


>gi|325690565|gb|EGD32568.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 729

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + WI  ++V+V R IP ++V  F+
Sbjct: 522 LLKGLGVTIALALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFI 581

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 582 FWGIPNLIESMTGQQSP 598


>gi|288905601|ref|YP_003430823.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus UCN34]
 gi|288732327|emb|CBI13897.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Streptococcus gallolyticus UCN34]
          Length = 741

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            ++ LS    T+      F  + V+GI+  + A         K  + +  +++   ++ G
Sbjct: 531 YSQLLSGLGKTLSLTLISFAIAMVIGIIFGMMAVA-----PNKVLRTISAVFVD--IVRG 583

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 584 IPLMIVAAFIFW---GIPNLLE-SITGKQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 639

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 640 VPQGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 699

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   IYL +  ++     RL  ++ 
Sbjct: 700 TGKIIIARNYQSFRMYAILAVIYLVMITLLTRLAKRLEKRLK 741



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 32/61 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A +IG + G   ++ NK++  I  V+V++ R IP ++V  F+
Sbjct: 534 LLSGLGKTLSLTLISFAIAMVIGIIFGMMAVAPNKVLRTISAVFVDIVRGIPLMIVAAFI 593

Query: 149 Y 149
           +
Sbjct: 594 F 594


>gi|322389670|ref|ZP_08063218.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321143669|gb|EFX39099.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 727

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 13/252 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVL 200
           ++  +L     S            +G+  NN    LS   +T+      F  + V+G++ 
Sbjct: 486 ILDKYLKADSKSSTSSTTADETTIWGLLQNNYKQLLSGLGVTLALALLSFAIAMVIGVIF 545

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +F+         K  +    +++   +I G+P ++L A  +      P L + +  G  
Sbjct: 546 GMFS-----VSPYKWLRWTAEIFVD--VIRGIPLMILAAFIFW---GIPNLIE-SVTGHQ 594

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           +   +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA 
Sbjct: 595 SPINDFVAGTIALSLNAAAYIAEIVRGGIQAVPIGQMEASRSLGISYGKTMRKIILPQAT 654

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  +
Sbjct: 655 KLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAVFYLVIITL 714

Query: 381 IALFMNRLNAKI 392
           +  F  +L  K+
Sbjct: 715 LTRFAKKLEKKV 726



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + W   ++V+V R IP +++  F+
Sbjct: 520 LLSGLGVTLALALLSFAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFI 579

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 580 FWGIPNLIESVTGHQSP 596


>gi|324994617|gb|EGC26530.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|327462473|gb|EGF08797.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327474328|gb|EGF19734.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|327489715|gb|EGF21505.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 729

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 519 YQELLKGLGVTIALALISFAIAMVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 571

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +    F++  IALS    A+IAEIVR G+ A
Sbjct: 572 IPLMIVAAFIFW---GIPNLIE-SMTGQQSPINAFVAGTIALSLNAGAYIAEIVRGGIQA 627

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G A+L  
Sbjct: 628 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLAELFK 687

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  +I 
Sbjct: 688 TGKDIIARNYQSFRMYAILAVLYLIIITLLTRLAKRLEKRIK 729



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 6/126 (4%)

Query: 44  CVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS----SYATAILVGFVNTFWL 99
             NN   N+++S        L +    E+ +  V  ++      +    +L G   T  L
Sbjct: 475 MFNNGLANLKESGKYQ--EILDKYLASEVKESTVDESTIWGLLQNNYQELLKGLGVTIAL 532

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A      A +IG + G   +S  K + WI  ++V+V R IP ++V  F++  + +++   
Sbjct: 533 ALISFAIAMVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGIPLMIVAAFIFWGIPNLIESM 592

Query: 160 DHSIVL 165
                 
Sbjct: 593 TGQQSP 598


>gi|116512613|ref|YP_811520.1| amino acid ABC transporter permease/periplasmic protein
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116108267|gb|ABJ73407.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactococcus lactis subsp. cremoris SK11]
          Length = 714

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 123/245 (50%), Gaps = 25/245 (10%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSR----- 209
                     FG+  NN       L +     +  F+ + ++GI+  LF+   S+     
Sbjct: 487 IQSSAKENTFFGILQNNWEQIGRGLLVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTI 546

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              +    +++PLL ++ F+ +G+P L+ I   +Q   +                 EF +
Sbjct: 547 ARIYVDLNRSIPLLVLTIFIFYGIPNLLQIITGHQSPLN-----------------EFTA 589

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP L 
Sbjct: 590 GVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLI 649

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+++L   +G  +L+  G  I+ +  QA  +  +   +Y+ + + +     R+
Sbjct: 650 NQFIITLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYMIVLLFLMWVGRRV 709

Query: 389 NAKIA 393
             ++ 
Sbjct: 710 EKRMK 714



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 22/135 (16%)

Query: 44  CVNNVYNNMEKSN---------LSLGIGFLSERAG----FEIDQGIVPYTSDSSYATAIL 90
             NN   N+  +          L+     +   A     F I Q         +    I 
Sbjct: 458 MFNNGLANLRANGEYDKIIDKYLASDAKTIQSSAKENTFFGILQ---------NNWEQIG 508

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G + T  LA    I A I+G + G   ++ +K++  I R+YV++ R+IP LV+  F++ 
Sbjct: 509 RGLLVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDLNRSIPLLVLTIFIFY 568

Query: 151 SVLSVLPIPDHSIVL 165
            + ++L I       
Sbjct: 569 GIPNLLQIITGHQSP 583


>gi|225870779|ref|YP_002746726.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
 gi|225700183|emb|CAW94346.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus equi subsp. equi
           4047]
          Length = 721

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 23/211 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEK------TGKALPLLYISTFLIFGLPTLVLIALK 241
             F  + V+GIV  + A   S++            + +PL+ ++ F+ +G+P L+     
Sbjct: 527 ISFAIALVIGIVFGMMAVSPSKNLRMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTG 586

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +Q   +                 +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 587 HQSPIN-----------------DFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 629

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL++    R ++LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 630 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 689

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 690 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 720



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 13/179 (7%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
                A +IG + G   +S +K +     ++V+V R IP ++V  F++  V +++     
Sbjct: 527 ISFAIALVIGIVFGMMAVSPSKNLRMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTG 586

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         LS               +++  IV        +     +  ++L L
Sbjct: 587 HQSPINDFVAATIALSLNGG-----------AYIAEIVRGGIEAVPAG--QMEASRSLGL 633

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            Y +T     LP  + + L   ++     L     +    +   F +  I ++    +F
Sbjct: 634 SYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 692


>gi|15673741|ref|NP_267915.1| glutamine ABC transporter permease and substrate binding protein
           [Lactococcus lactis subsp. lactis Il1403]
 gi|12724781|gb|AAK05857.1|AE006406_1 glutamine ABC transporter permease and substrate binding protein
           protein [Lactococcus lactis subsp. lactis Il1403]
 gi|326407245|gb|ADZ64316.1| glutamine ABC transporter permease/substrate-binding protein
           [Lactococcus lactis subsp. lactis CV56]
          Length = 714

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 123/245 (50%), Gaps = 25/245 (10%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSR----- 209
                     FG+  NN       L +     I  F+ + ++GI+  LF+   S+     
Sbjct: 487 IQSSAKENTFFGILQNNWEQIGRGLLVTLELAILSFILAMIVGIIFGLFSVAPSKILRTI 546

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              +    +++PLL ++ F+ +G+P L+ I   +Q   +                 EF +
Sbjct: 547 ARIYVDLNRSIPLLVLTIFIFYGIPNLLQIITGHQSPLN-----------------EFTA 589

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP L 
Sbjct: 590 GVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLI 649

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+++L   +G  +L+  G  I+ +  QA  +  +   +Y+ + + +     R+
Sbjct: 650 NQFIITLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYMIVLLFLMWIGRRV 709

Query: 389 NAKIA 393
             ++ 
Sbjct: 710 EKRMK 714



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA    I A I+G + G   ++ +K++  I R+YV++ R+IP LV+  F++  
Sbjct: 510 GLLVTLELAILSFILAMIVGIIFGLFSVAPSKILRTIARIYVDLNRSIPLLVLTIFIFYG 569

Query: 152 VLSVLPIPDHSIVL 165
           + ++L I       
Sbjct: 570 IPNLLQIITGHQSP 583


>gi|195978381|ref|YP_002123625.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein GlnP [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975086|gb|ACG62612.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein GlnP [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 713

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 23/211 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEK------TGKALPLLYISTFLIFGLPTLVLIALK 241
             F  + V+GIV  + A   S++            + +PL+ ++ F+ +G+P L+     
Sbjct: 519 ISFAIALVIGIVFGMMAVSPSKNLRMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTG 578

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +Q   +                 +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 579 HQSPIN-----------------DFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 621

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL++    R ++LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 622 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 681

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 682 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 712



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 13/179 (7%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
                A +IG + G   +S +K +     ++V+V R IP ++V  F++  V +++     
Sbjct: 519 ISFAIALVIGIVFGMMAVSPSKNLRMASTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTG 578

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         LS               +++  IV        +     +  ++L L
Sbjct: 579 HQSPINDFVAATIALSLNGG-----------AYIAEIVRGGIEAVPAG--QMEASRSLGL 625

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            Y +T     LP  + + L   ++     L     +    +   F +  I ++    +F
Sbjct: 626 SYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 684


>gi|222151827|ref|YP_002560987.1| glutamine-binding periplasmic protein homolog [Macrococcus
           caseolyticus JCSC5402]
 gi|222120956|dbj|BAH18291.1| glutamine-binding periplasmic protein homolog [Macrococcus
           caseolyticus JCSC5402]
          Length = 483

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 119/249 (47%), Gaps = 18/249 (7%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRL 207
           K+++       +  +   G F +  G  F      T   I +   +LG +    L   +L
Sbjct: 251 KNLIQDYKDKANQEMFDDGSFFSKYGTFFIQGIGGTIV-ISLIGVLLGSLFGGILAFMKL 309

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           S++   +T       +I    I G P LV + L Y   F    +   +          F+
Sbjct: 310 SKNIIARTIS-----WIYIEFIRGTPLLVQVFLVY---FGTTAVLGIDL-------SAFI 354

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              IAL    AA+IAEI+R+G+ AV +GQMEAA +LGL+H +A   V++PQA++ I+P L
Sbjct: 355 CGAIALVINCAAYIAEIIRAGIKAVDKGQMEAARSLGLSHSQAMNKVIMPQAIKKILPAL 414

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++++ ++K SS+   +G ++L+     +   +      +LI   +Y  L+  ++  MN 
Sbjct: 415 GNEFITVIKESSIVSVIGVSELMFNAQVVQGASFDPFTPLLIAAVVYFILTFGLSRVMNV 474

Query: 388 LNAKIALKE 396
              ++++ +
Sbjct: 475 FERRMSVSD 483



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 36/73 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y T  + G   T  ++  G++  ++ G ++   +LS N +   I  +Y+E  R  P L
Sbjct: 273 SKYGTFFIQGIGGTIVISLIGVLLGSLFGGILAFMKLSKNIIARTISWIYIEFIRGTPLL 332

Query: 143 VVIFFLYKSVLSV 155
           V +F +Y    +V
Sbjct: 333 VQVFLVYFGTTAV 345


>gi|322516335|ref|ZP_08069261.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322125173|gb|EFX96562.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 732

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L    +T+      F  + ++G++  + A         +T + +  +++   ++ G
Sbjct: 522 YKQLLQGLGITLGLTLLSFAIAMIIGVLFGMMAVA-----PNQTLRVISQVFVD--VVRG 574

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  Y      P L + N  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 575 IPLMIVAAFIYW---GIPNLIE-NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 630

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+ +    R V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 631 VPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 690

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +   +     RL  ++ 
Sbjct: 691 TGKIIIARNYQSFRMYAILAILYLVIITCLTKLAKRLEKRLK 732



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 13/175 (7%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A IIG L G   ++ N+ +  I +V+V+V R IP ++V  F+Y  + +++         
Sbjct: 542 IAMIIGVLFGMMAVAPNQTLRVISQVFVDVVRGIPLMIVAAFIYWGIPNLIENITGHQSP 601

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                     LS             V   +  + +             +  ++L + Y +
Sbjct: 602 INDFVAATIALSLNGG---AYIAEIVRGGIEAVPIG----------QMEASRSLGVPYNT 648

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T     LP  V + L   ++     L     +    +   F +  I ++    +F
Sbjct: 649 TMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 703


>gi|330684749|gb|EGG96444.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 486

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 118/266 (44%), Gaps = 20/266 (7%)

Query: 137 RNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +N P L+      +     K+++        + +   G F       F     +T    F
Sbjct: 235 KNSPILLKKLNQTINEVNDKNLIDKYMSKAANDMQDDGNFYTKYKSFFIKGLENTILISF 294

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   VLG +L  F   L +    K    +  +YI    + G P LV + + +        
Sbjct: 295 I-GVVLGAILGAFI-ALMKLSKFKPLSWIASIYIEF--LRGTPLLVQVFIVFFGTTAALG 350

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L               +   IAL   ++A+IAEI R+G+ ++ +GQ EAA +LGL++ + 
Sbjct: 351 LD----------ISALICGTIALVINSSAYIAEIFRAGINSIDKGQTEAARSLGLSYNQT 400

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + V++PQA+++I+P L ++++ L+K SS+   +G  +++     +   +      +L+ 
Sbjct: 401 MKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVA 460

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +Y  L+  ++  MN +  ++   +
Sbjct: 461 AGMYFILTFALSRIMNFIEGRMKASD 486



 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 37/71 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +  + G  NT  ++F G++   I+G  +   +LS  K ++WI  +Y+E  R  P LV 
Sbjct: 278 YKSFFIKGLENTILISFIGVVLGAILGAFIALMKLSKFKPLSWIASIYIEFLRGTPLLVQ 337

Query: 145 IFFLYKSVLSV 155
           +F ++    + 
Sbjct: 338 VFIVFFGTTAA 348


>gi|281492351|ref|YP_003354331.1| glutamine ABC transporter permease/substrate-binding protein
           [Lactococcus lactis subsp. lactis KF147]
 gi|281376015|gb|ADA65506.1| Glutamine ABC transporter, permease and substrate-binding protein
           [Lactococcus lactis subsp. lactis KF147]
          Length = 714

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 123/245 (50%), Gaps = 25/245 (10%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSR----- 209
                     FG+  NN       L +     I  F+ + ++GI+  LF+   S+     
Sbjct: 487 IQSSAKENTFFGILQNNWEQIGRGLLVTLELAILSFILAMIVGIIFGLFSVAPSKILRTI 546

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              +    +++PLL ++ F+ +G+P L+ I   +Q   +                 EF +
Sbjct: 547 ARIYVDLNRSIPLLVLTIFIFYGIPNLLQIITGHQSPLN-----------------EFTA 589

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP L 
Sbjct: 590 GVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPSLI 649

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+++L   +G  +L+  G  I+ +  QA  +  +   +Y+ + + +     R+
Sbjct: 650 NQFIITLKDTTLVSVIGLVELLQTGQIIVARNFQAFRVYGLIGLVYMIVLLFLMWVGRRV 709

Query: 389 NAKIA 393
             ++ 
Sbjct: 710 EKRMK 714



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA    I A I+G + G   ++ +K++  I R+YV++ R+IP LV+  F++  
Sbjct: 510 GLLVTLELAILSFILAMIVGIIFGLFSVAPSKILRTIARIYVDLNRSIPLLVLTIFIFYG 569

Query: 152 VLSVLPIPDHSIVL 165
           + ++L I       
Sbjct: 570 IPNLLQIITGHQSP 583


>gi|312115907|ref|YP_004013503.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221036|gb|ADP72404.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 357

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 144/372 (38%), Positives = 205/372 (55%), Gaps = 22/372 (5%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R     +Q  L   +  +  W V   + N+ +  +  G+GFLSE AGF + Q ++P+   
Sbjct: 6   RAARFWIQAALLAAVAALAGWLVFTAWTNIGRLPVHFGLGFLSEPAGFSVLQTLIPFDEK 65

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y  A +VG +NT  +A  G+  AT+IG  VG  RL+ N+L+  +   YVE+FRN+P L
Sbjct: 66  STYGRAFMVGLLNTLLVAAIGIALATVIGFSVGVARLAPNRLLRAVAAGYVELFRNLPLL 125

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++FF Y  VL  LP P  S  L  G+ LNNRGL  P         +   + +   +   
Sbjct: 126 LLLFFFYFGVLRQLPPPRQSFEL-GGVILNNRGLFLPDPAGGGWLVLAALALLAAALALK 184

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R+             L                       H   P     +  GG  +
Sbjct: 185 SRWRIFAGVGAAVALVSALAMT--------------------HIVWPEARGLSVSGGLRL 224

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            PEF++L  AL+ YTAA+IAEIVR+G+ +V RGQ +AA ALGLT  +A R V+LPQA+R 
Sbjct: 225 IPEFVALVAALAIYTAAYIAEIVRAGIQSVARGQGQAAAALGLTGLQAMRFVVLPQALRL 284

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           ++PPLTSQYLNL KNSSLAVA+ + DLVS+  GT + QTGQA+EI+ + M +YL+LS+  
Sbjct: 285 VVPPLTSQYLNLTKNSSLAVAIAYPDLVSIFAGTTLAQTGQAVEIMALTMGVYLTLSLAT 344

Query: 382 ALFMNRLNAKIA 393
           A  +N  NA++ 
Sbjct: 345 AALLNWQNARVR 356


>gi|312863094|ref|ZP_07723332.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus vestibularis F0396]
 gi|311100630|gb|EFQ58835.1| lysine-arginine-ornithine-binding periplasmic protein
           [Streptococcus vestibularis F0396]
          Length = 732

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L    +T+      F  + ++G++  + A         +T + +  +++   ++ G
Sbjct: 522 YKQLLQGLGITLGLTLLSFAIAMIIGVLFGMMAVA-----PNQTLRVISQVFVD--VVRG 574

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  Y      P L + N  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 575 IPLMIVAAFIYW---GIPNLIE-NITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 630

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+ +    R V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 631 VPIGQMEASRSLGVPYNTTMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 690

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +   +     RL  ++ 
Sbjct: 691 TGKIIIARNYQSFRMYAILAILYLVIITCLTKLAKRLEKRLK 732



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 13/175 (7%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A IIG L G   ++ N+ +  I +V+V+V R IP ++V  F+Y  + +++         
Sbjct: 542 IAMIIGVLFGMMAVAPNQTLRVISQVFVDVVRGIPLMIVAAFIYWGIPNLIENITGHQSP 601

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                     LS             V   +  + +             +  ++L + Y +
Sbjct: 602 INDFVAATIALSLNGG---AYIAEIVRGGIEAVPIG----------QMEASRSLGVPYNT 648

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           T     LP  V + L   ++     L     +    +   F +  I ++    +F
Sbjct: 649 TMRKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 703


>gi|315221701|ref|ZP_07863617.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315189188|gb|EFU22887.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 727

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 116/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS   +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 517 YKQLLSGLGITIALALLSFAIAMVIGIIFGMFS-----VSPVKALRVISEIFVD--VIRG 569

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P ++L A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 570 IPLMILAAFIFW---GIPNLIE-SMTGHQSPINDFVAGTIALSLNAGAYIAEIVRGGIQA 625

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L  
Sbjct: 626 VPAGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQ 685

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+ ++  I    YL +  ++     RL  +I 
Sbjct: 686 TGKIIIARNYQSFKMYAILAVFYLIIITLLTRLAKRLEKRIK 727



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 69/192 (35%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 520 LLSGLGITIALALLSFAIAMVIGIIFGMFSVSPVKALRVISEIFVDVIRGIPLMILAAFI 579

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   L         NA  ++   V G + ++ A    
Sbjct: 580 FWGIPNLIESMTGHQSPINDFVAGTIAL-------SLNAGAYIAEIVRGGIQAVPAG--- 629

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP    I L   ++     L     +    +   F +
Sbjct: 630 ---QMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQT 686

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 687 GKIIIARNYQSF 698


>gi|257865935|ref|ZP_05645588.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872268|ref|ZP_05651921.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257799869|gb|EEV28921.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806432|gb|EEV35254.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 717

 Score =  189 bits (479), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            N  L     T+      F  + V+GI+  LF+         K  +    +Y+   +I G
Sbjct: 513 YNVLLKGLWNTLLLALISFALALVIGIIFGLFSVA-----PIKALRVFAGIYVD--IIRG 565

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +VL    +    D                P+F +  I L+   +A+IAEIVR G+ A
Sbjct: 566 IPMMVLAFFIFFGLSDA----------IGITIPDFAAGVITLTLNASAYIAEIVRGGINA 615

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQMEA+ +LG+T+ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+ 
Sbjct: 616 VPKGQMEASRSLGMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQ 675

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   IYL +   +      L  K+ 
Sbjct: 676 TGKIIVARTTQSTYVYLIIAIIYLVVITALTKLAKVLEKKVK 717



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +D+  +     ++Y   +L G  NT  LA      A +IG + G   ++  K +     +
Sbjct: 500 VDESTITGLISNNYN-VLLKGLWNTLLLALISFALALVIGIIFGLFSVAPIKALRVFAGI 558

Query: 132 YVEVFRNIPPLVVIFFLYKSV 152
           YV++ R IP +V+ FF++  +
Sbjct: 559 YVDIIRGIPMMVLAFFIFFGL 579


>gi|323127536|gb|ADX24833.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 725

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 23/227 (10%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYIS 225
             +  +    T+      F  + ++GI+  + A       RL         + +PL+ ++
Sbjct: 515 YKQLWAGLGTTLSLTLISFAIAMIIGIIFGMMAVSPTKSLRLISTIFVDVVRGIPLMIVA 574

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F+ +G+P L+     +Q   +                 +F++  IALS    A+IAEIV
Sbjct: 575 AFIFWGVPNLIESMTGHQSPIN-----------------DFLAATIALSLNGGAYIAEIV 617

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVP GQMEA+ +LGL +    R V+LPQA++ ++P   +Q++  LK++++  A+G
Sbjct: 618 RGGIEAVPAGQMEASRSLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIG 677

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 678 LVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 14/215 (6%)

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           + +   +D+  +     ++Y   +  G   T  L       A IIG + G   +S  K +
Sbjct: 496 KPSEKNVDESTIAGLLSNNYKQ-LWAGLGTTLSLTLISFAIAMIIGIIFGMMAVSPTKSL 554

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             I  ++V+V R IP ++V  F++  V +++                   LS        
Sbjct: 555 RLISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG---- 610

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                  +++  IV        +     +  ++L L Y +T     LP  V + L   ++
Sbjct: 611 -------AYIAEIVRGGIEAVPAG--QMEASRSLGLPYATTMRKVILPQAVKLMLPNFIN 661

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                L     +    +   F +  I ++    +F
Sbjct: 662 QFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 696


>gi|265988439|ref|ZP_06100996.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Brucella
           pinnipedialis M292/94/1]
 gi|264660636|gb|EEZ30897.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Brucella
           pinnipedialis M292/94/1]
          Length = 317

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 107/211 (50%), Positives = 152/211 (72%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A     + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + F
Sbjct: 107 AWALPVALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSF 166

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL 
Sbjct: 167 DVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLR 226

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E+
Sbjct: 227 SGQTMRLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEV 286

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + IWM IYL +S++++  MN  NAK+AL E+
Sbjct: 287 VAIWMVIYLGISLIVSGLMNWFNAKMALVER 317


>gi|329116273|ref|ZP_08244990.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326906678|gb|EGE53592.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 724

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 23/228 (10%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH------EKTGKALPLLYIS 225
            N+ LS    T+      F  + ++G++  + A   S+             + +PL+ ++
Sbjct: 514 YNQLLSGLWTTLSLTLISFAIAMIIGLIFGMMAVAPSKALRIISSIFVDVVRGVPLMIVA 573

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F+ +G+P L+     +Q   +                 +F++  IALS    A+IAEIV
Sbjct: 574 AFIFWGIPNLIESMTGHQSPIN-----------------DFLAATIALSLNGGAYIAEIV 616

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVP GQMEA+ +LG+ ++   R V+LPQA++ ++P   +Q++  LK++++  A+G
Sbjct: 617 RGGIEAVPLGQMEASRSLGIPYKITMRKVILPQAIKVMLPNFINQFVISLKDTTIVSAIG 676

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L   G  II +  Q+  +  I   IYL +   +     RL  +  
Sbjct: 677 LVELFQTGKIIIARNYQSFRMYAILAIIYLIMITFLTRLAKRLEKRFK 724



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A IIG + G   ++ +K +  I  ++V+V R +P ++V  F+
Sbjct: 517 LLSGLWTTLSLTLISFAIAMIIGLIFGMMAVAPSKALRIISSIFVDVVRGVPLMIVAAFI 576

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   LS             V   +  + L        
Sbjct: 577 FWGIPNLIESMTGHQSPINDFLAATIALSLNGG---AYIAEIVRGGIEAVPLG------- 626

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP  + + L   ++     L     +    +   F +
Sbjct: 627 ---QMEASRSLGIPYKITMRKVILPQAIKVMLPNFINQFVISLKDTTIVSAIGLVELFQT 683

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 684 GKIIIARNYQSF 695


>gi|77409421|ref|ZP_00786118.1| GlnP [Streptococcus agalactiae COH1]
 gi|77171979|gb|EAO75151.1| GlnP [Streptococcus agalactiae COH1]
          Length = 469

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 117/222 (52%), Gaps = 11/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS    T+      F  + V+GI+  + +   S      T + + ++++   ++ G
Sbjct: 259 YKQLLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSN-----TLRTISMIFVD--IVRG 311

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 312 IPLMIVAAFIFW---GIPNLIE-SITGHQSPINDFVAATIALSLNGGAYIAEIVRGGIEA 367

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  + V+LPQA+R ++P   +Q++  LK++++  A+G  +L  
Sbjct: 368 VPSGQMEASRSLGISYGKTMQKVILPQAVRLMLPNFINQFVISLKDTTIVSAIGLVELFQ 427

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  Q+  +  I   +YL +  ++     RL  ++ 
Sbjct: 428 TGKIIIARNYQSFRMYAILAIMYLVIITLLTRLAKRLEKRLK 469



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           +++A   +D+  +     ++Y   +L G   T  L       A +IG + G   +S +  
Sbjct: 239 NDKAAKPVDESTILGLISNNYKQ-LLSGIGTTLSLTLISFAIAMVIGIIFGMMSVSPSNT 297

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I  ++V++ R IP ++V  F++  + +++                   LS       
Sbjct: 298 LRTISMIFVDIVRGIPLMIVAAFIFWGIPNLIESITGHQSPINDFVAATIALSLNGG--- 354

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   +++  IV        S     +  ++L + Y  T     LP  V + L   +
Sbjct: 355 --------AYIAEIVRGGIEAVPSG--QMEASRSLGISYGKTMQKVILPQAVRLMLPNFI 404

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +     L     +    +   F +  I ++    +F
Sbjct: 405 NQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 440


>gi|239637861|ref|ZP_04678822.1| glutamine-binding periplasmic protein [Staphylococcus warneri
           L37603]
 gi|239596424|gb|EEQ78960.1| glutamine-binding periplasmic protein [Staphylococcus warneri
           L37603]
          Length = 486

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 116/266 (43%), Gaps = 20/266 (7%)

Query: 137 RNIPPLVVIF------FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +N P L+            K+++        + +   G F       F     +T    F
Sbjct: 235 KNSPILLKKLNQTSNEVNDKNLIDHYMTKAANDMQDDGNFYTKYKSFFIKGLQNTILISF 294

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   V G +L  F   L +    K    +  +YI    + G P LV + + +        
Sbjct: 295 V-GVVFGAILGAFI-ALMKLSKFKPLSWIASIYIEF--LRGTPLLVQVFIVFFGTTAALG 350

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L               +   IAL   ++A+IAEI R+G+ ++ +GQ EAA +LGL++ + 
Sbjct: 351 LD----------ISALICGTIALVINSSAYIAEIFRAGINSIDKGQTEAARSLGLSYNQT 400

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + V++PQA+++I+P L ++++ L+K SS+   +G  +++     +   +      +L+ 
Sbjct: 401 MKSVVMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVA 460

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +Y  L+  ++  MN +  ++   +
Sbjct: 461 AGMYFILTFALSRIMNFIEGRMKASD 486



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 37/71 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +  + G  NT  ++F G++   I+G  +   +LS  K ++WI  +Y+E  R  P LV 
Sbjct: 278 YKSFFIKGLQNTILISFVGVVFGAILGAFIALMKLSKFKPLSWIASIYIEFLRGTPLLVQ 337

Query: 145 IFFLYKSVLSV 155
           +F ++    + 
Sbjct: 338 VFIVFFGTTAA 348


>gi|251782718|ref|YP_002997021.1| glutamine-binding protein/glutamine transportsystem permease
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242391348|dbj|BAH81807.1| glutamine-binding protein/glutamine transportsystem permease
           protein [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 725

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 23/227 (10%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYIS 225
             +  +    T+      F  + ++GI+  + A       RL         + +PL+ ++
Sbjct: 515 YKQLWAGLGTTLSLTLISFAIAMIIGIIFGMMAVSPTKSLRLISTIFVDVVRGIPLMIVA 574

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F+ +G+P L+     +Q   +                 +F++  IALS    A+IAEIV
Sbjct: 575 AFIFWGVPNLIESMTGHQSPIN-----------------DFLAATIALSLNGGAYIAEIV 617

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVP GQMEA+ +LGL +    R V+LPQA++ ++P   +Q++  LK++++  A+G
Sbjct: 618 RGGIEAVPAGQMEASRSLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIG 677

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +L   G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 678 LVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 14/215 (6%)

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           + +   +D+  +     ++Y   +  G   T  L       A IIG + G   +S  K +
Sbjct: 496 KPSEKNVDESTIAGLLSNNYKQ-LWAGLGTTLSLTLISFAIAMIIGIIFGMMAVSPTKSL 554

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             I  ++V+V R IP ++V  F++  V +++                   LS        
Sbjct: 555 RLISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG---- 610

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                  +++  IV        +     +  ++L L Y +T     LP  V + L   ++
Sbjct: 611 -------AYIAEIVRGGIEAVPAG--QMEASRSLGLPYATTMRKVILPQAVKLMLPNFIN 661

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                L     +    +   F +  I ++    +F
Sbjct: 662 QFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 696


>gi|312869117|ref|ZP_07729291.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095363|gb|EFQ53633.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 502

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +F    ++    I V S + G +L      L R    K    + + YI    I G P 
Sbjct: 295 YWTFFAKGVEYTLIITVISVIFGFLLGTL-FALMRLSQSKLLHGIAICYIEF--IRGTPM 351

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   Y           F         P  ++  IA+S  + A++AE++RSG+ ++P 
Sbjct: 352 LVQIMFVY-----------FGIGAIIQSMPALVAGIIAVSVNSGAYVAEVIRSGIQSLPI 400

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG+T ++  R ++LPQA+R+I P L ++++ LLK+SSL   +G  +L+    
Sbjct: 401 GQTEAARSLGMTKKQTFRFIVLPQALRNIWPALGNEFITLLKDSSLVSTIGVGELMYQTQ 460

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   T + +  + I M IY  L+  +   +N    ++
Sbjct: 461 LVQADTYKGVLPLFITMMIYFILTFTLTRILNYFEGRM 498



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 36/78 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY T    G   T  +    +I   ++GTL    RLS +KL+  I   Y+E  R  P LV
Sbjct: 294 SYWTFFAKGVEYTLIITVISVIFGFLLGTLFALMRLSQSKLLHGIAICYIEFIRGTPMLV 353

Query: 144 VIFFLYKSVLSVLPIPDH 161
            I F+Y  + +++     
Sbjct: 354 QIMFVYFGIGAIIQSMPA 371


>gi|289434115|ref|YP_003463987.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170359|emb|CBH26899.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313634164|gb|EFS00821.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri FSL N1-067]
 gi|313638787|gb|EFS03871.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria seeligeri FSL S4-171]
          Length = 480

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLDGMWLTIKLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMLKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRLR 478



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLDGMWLTIKLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|325570015|ref|ZP_08145940.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156843|gb|EGC69014.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 760

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            N  L     T+      F  + V+GI+  LF+         K  +    +Y+   +I G
Sbjct: 556 YNVLLKGLWNTLLLALISFALALVIGIIFGLFSVA-----PIKALRVFAGIYVD--IIRG 608

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +VL    +    D                P+F +  I L+   +A+IAEIVR G+ A
Sbjct: 609 IPMMVLAFFIFFGLSDA----------IGITIPDFAAGVITLTLNASAYIAEIVRGGINA 658

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQMEA+ +LG+T+ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+ 
Sbjct: 659 VPKGQMEASRSLGMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQ 718

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   IYL +   +      L  K+ 
Sbjct: 719 TGKIIVARTTQSTYVYLIIAIIYLVVITALTKLAKVLEKKVK 760



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +D+  +     ++Y   +L G  NT  LA      A +IG + G   ++  K +     +
Sbjct: 543 VDESTITGLISNNYN-VLLKGLWNTLLLALISFALALVIGIIFGLFSVAPIKALRVFAGI 601

Query: 132 YVEVFRNIPPLVVIFFLYKSV 152
           YV++ R IP +V+ FF++  +
Sbjct: 602 YVDIIRGIPMMVLAFFIFFGL 622


>gi|257875562|ref|ZP_05655215.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257809728|gb|EEV38548.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 712

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            N  L     T+      F  + V+GI+  LF+         K  +    +Y+   +I G
Sbjct: 508 YNVLLKGLWNTLLLALISFALALVIGIIFGLFSVA-----PIKALRVFAGIYVD--IIRG 560

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +VL    +    D                P+F +  I L+   +A+IAEIVR G+ A
Sbjct: 561 IPMMVLAFFIFFGLSDA----------IGITIPDFAAGVITLTLNASAYIAEIVRGGINA 610

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQMEA+ +LG+T+ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+ 
Sbjct: 611 VPKGQMEASRSLGMTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQ 670

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   IYL +   +      L  K+ 
Sbjct: 671 TGKIIVARTTQSTYVYLIIAIIYLVVITALTKLAKVLEKKVK 712



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +D+  +     ++Y   +L G  NT  LA      A +IG + G   ++  K +     +
Sbjct: 495 VDESTITGLISNNYN-VLLKGLWNTLLLALISFALALVIGIIFGLFSVAPIKALRVFAGI 553

Query: 132 YVEVFRNIPPLVVIFFLYKSV 152
           YV++ R IP +V+ FF++  +
Sbjct: 554 YVDIIRGIPMMVLAFFIFFGL 574


>gi|313609881|gb|EFR85296.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL F2-208]
          Length = 471

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 265 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 317

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 318 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 367

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 368 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 427

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 428 SGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLR 469



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 265 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 324

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 325 FFFYFGIPAA 334


>gi|323441690|gb|EGA99335.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           O46]
          Length = 467

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 242 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKVIS 300

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 301 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 348

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 349 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 408

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 409 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 467



 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKVISWIASIYIEILRGTPML 316

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 317 VQVFIVFFGITAA 329


>gi|227894251|ref|ZP_04012056.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863971|gb|EEJ71392.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 494

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VFS ++GIVL +    L R    K    + + YI    I G P +V I   Y    
Sbjct: 299 IVITVFSVLIGIVLGMLL-ALMRLSQNKLLHWIAVCYIEF--IRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F      +     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 352 -------FGIGVLISNLSALVAGIIAIGLNSGAYVAEDIRSGISSVAKGQTEAARSLGLS 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 405 QAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 464

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + I M IY  ++  +   +N    ++ 
Sbjct: 465 LFIAMIIYFIMTFTLTRLLNYFERRMK 491



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T  +    ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 287 YVPYFIKGVGYTIVITVFSVLIGIVLGMLLALMRLSQNKLLHWIAVCYIEFIRGTPQMVQ 346

Query: 145 IFFLYKSV 152
           I F+Y  +
Sbjct: 347 ILFVYFGI 354


>gi|328464936|gb|EGF36224.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus MTCC 5463]
          Length = 473

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VFS ++GIVL +    L R    K    + + YI    I G P +V I   Y    
Sbjct: 278 IIITVFSVLIGIVLGMLL-ALMRLSKNKLLHWIAVCYIEF--IRGTPQMVQILFVY---- 330

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F      +     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 331 -------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLS 383

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 384 QAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 443

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + I M IY  ++  +   +N    ++ 
Sbjct: 444 LFIAMIIYFIMTFTLTRLLNYFERRMK 470



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 266 YAPYFVKGTEYTIIITVFSVLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQ 325

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 326 ILFVYFGV 333


>gi|308067589|ref|YP_003869194.1| Glutamine transport system permease protein glnP [Paenibacillus
           polymyxa E681]
 gi|305856868|gb|ADM68656.1| Glutamine transport system permease protein glnP [Paenibacillus
           polymyxa E681]
          Length = 482

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 17/209 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +F+LG+V         +  H K  + +  +++  F       + LI L + ++F
Sbjct: 291 LVSLLVAFILGLVFGFM-----KVSHNKVFRGIATVFVDIFR-----GIPLIVLAFFIYF 340

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P    F         P F++  + LS    A++ EI+R G+ ++  GQMEAA +LGL 
Sbjct: 341 GIPQALDF-------KMPLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQMEAARSLGLP 393

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R A   ++LPQA++ +IP   +Q +  LK++S+   +G  +L   G  II +T Q+ +I
Sbjct: 394 YRTAMLKIILPQAVKIMIPSFINQLVITLKDTSILSVIGLVELTQSGKIIIARTFQSFDI 453

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            L+   +YL +  ++    NRL  ++   
Sbjct: 454 WLVVAVMYLIVITVLTKISNRLEGRVRRG 482



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G  NT       ++ A I+G + G  ++S NK+   I  V+V++FR IP +V+ FF+
Sbjct: 279 LIKGMGNTLLYTLVSLLVAFILGLVFGFMKVSHNKVFRGIATVFVDIFRGIPLIVLAFFI 338

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 339 YFGIPQA 345


>gi|259502414|ref|ZP_05745316.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259169557|gb|EEW54052.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 497

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 20/272 (7%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN-RGLSFPTLTMDTNAKIFV 191
           V V +N P LV       + L      D   V   G +++     +      +  AK   
Sbjct: 238 VAVAKNSPELVAAVNKTITKLQKHNTFDKEYVPRAGKYMSQGAKQNTMWNYWNYFAKGVG 297

Query: 192 FSFVLGIVLSLFATRL------SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           ++ ++ +  +LF   L       R         L + YI    I G P +V I   Y   
Sbjct: 298 YTIIIAVCSALFGIILGLLLALMRRSANLVLHGLAVAYIEF--IRGTPMMVQIMFVY--- 352

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                   F         P  ++  IA+S  + A++AEI+RSG+ AV  GQ+EA+ +LG+
Sbjct: 353 --------FGIGAIIQSMPAVIAGIIAISINSGAYVAEIIRSGIQAVSAGQVEASRSLGM 404

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           + R   R V+LPQA+R+I P L ++++ LLK+SSLA  +G  +L+     + + T + + 
Sbjct: 405 SKRLTMRYVVLPQAVRNIWPALGNEFITLLKDSSLASVIGVTELMYQTQLVQSATYKGVL 464

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + + M IY  L+  +   +N    K+    +
Sbjct: 465 PLGVAMLIYFILTFTLTRLLNFGERKLNRPRQ 496



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 41/105 (39%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      G   T  +A    +   I+G L+   R SAN ++  +   Y+E  R  P +
Sbjct: 286 WNYWNYFAKGVGYTIIIAVCSALFGIILGLLLALMRRSANLVLHGLAVAYIEFIRGTPMM 345

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           V I F+Y  + +++      I     + +N+       +     A
Sbjct: 346 VQIMFVYFGIGAIIQSMPAVIAGIIAISINSGAYVAEIIRSGIQA 390


>gi|310640366|ref|YP_003945124.1| glutamine transport system permease protein [Paenibacillus polymyxa
           SC2]
 gi|309245316|gb|ADO54883.1| Probable glutamine transport system permease protein [Paenibacillus
           polymyxa SC2]
          Length = 482

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 17/209 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +F+LG+V         +  H K  + +  +++  F       + LI L + ++F
Sbjct: 291 LVSLLVAFLLGLVFGFM-----KVSHNKVFRGIATVFVDVFR-----GIPLIVLAFFIYF 340

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P    F         P F++  + LS    A++ EI+R G+ ++  GQMEAA +LGL 
Sbjct: 341 GIPQALDF-------KMPLFVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQMEAARSLGLP 393

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R A   ++LPQA++ +IP   +Q +  LK++S+   +G  +L   G  II +T Q+ +I
Sbjct: 394 YRTAMLKIILPQAVKIMIPSFINQLVITLKDTSILSVIGLVELTQSGKIIIARTFQSFDI 453

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            L+   +YL +  ++    NRL  ++   
Sbjct: 454 WLVVAVMYLIVITVLTKISNRLEGRVRRG 482



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A++ G  NT       ++ A ++G + G  ++S NK+   I  V+V+VFR IP +V+ FF
Sbjct: 278 ALIKGMGNTLLYTLVSLLVAFLLGLVFGFMKVSHNKVFRGIATVFVDVFRGIPLIVLAFF 337

Query: 148 LYKSVLSV 155
           +Y  +   
Sbjct: 338 IYFGIPQA 345


>gi|186683156|ref|YP_001866352.1| polar amino acid ABC transporter inner membrane subunit [Nostoc
           punctiforme PCC 73102]
 gi|186465608|gb|ACC81409.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc
           punctiforme PCC 73102]
          Length = 501

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 13/270 (4%)

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            ++Y + F+  PP +     +++  +    P     +   +      L    +T+     
Sbjct: 244 SQIYQKWFKIKPPSLPAKSPFENQ-NSTSSPKIFTSIAVILQAFPTLLQGALVTLQLTII 302

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             VF  + G ++ +   RLSR       + L   Y+  F   G P LV I + Y   F  
Sbjct: 303 SVVFGLIGGSLIGIV--RLSRITPV---RWLARAYVDFF--RGTPLLVQIFMIY---FGL 352

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P + Q   IG +       +  IALS   AA+ AE+VR+G+ ++  GQ EAA +LGL+  
Sbjct: 353 PAISQ--EIGFTFTFDRLTAGIIALSLNNAAYTAEVVRAGIQSIETGQAEAAQSLGLSSI 410

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V+ PQA R +IPPL + +++LLK++SL   +G  +L+  G  I+    +A EI  
Sbjct: 411 QTMSYVIFPQAFRRMIPPLGNDFISLLKDTSLVSVIGLEELLRKGQLIVADNYRAFEIYA 470

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +YL L+++ +   + L   +   ++ 
Sbjct: 471 GVAVVYLCLTLLFSQAFSHLELWMNPVKRH 500



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 37/78 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++   I G+L+G  RLS    V W+ R YV+ FR  P LV IF +
Sbjct: 289 LLQGALVTLQLTIISVVFGLIGGSLIGIVRLSRITPVRWLARAYVDFFRGTPLLVQIFMI 348

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y  + ++      +    
Sbjct: 349 YFGLPAISQEIGFTFTFD 366


>gi|322412041|gb|EFY02949.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 725

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 113/221 (51%), Gaps = 11/221 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +  +    T+      F  + ++GI+  + A         K+ + +  +++   ++ G
Sbjct: 515 YKQLWAGLGTTLSLTLISFAIAMIIGIIFGMMA-----VSPTKSLRHISTIFVD--VVRG 567

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +++ A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 568 IPLMIVAAFIFW---GVPNLIE-SMTGHQSPINDFLAATIALSLNGGAYIAEIVRGGIEA 623

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL +    R V+LPQA++ ++P   +Q++  LK++++  A+G  +L  
Sbjct: 624 VPAGQMEASRSLGLPYATTMRKVILPQAVKLMLPNFINQFVISLKDTTIVSAIGLVELFQ 683

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  Q+  +  I   IYL +  ++     RL  ++
Sbjct: 684 TGKIIIARNYQSFRMYAILAIIYLIMITLLTRLAKRLEKRL 724



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 75/215 (34%), Gaps = 14/215 (6%)

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           + A   +D+  +     ++Y   +  G   T  L       A IIG + G   +S  K +
Sbjct: 496 KPAEKNVDESTIAGLLSNNYKQ-LWAGLGTTLSLTLISFAIAMIIGIIFGMMAVSPTKSL 554

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             I  ++V+V R IP ++V  F++  V +++                   LS        
Sbjct: 555 RHISTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG---- 610

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                  +++  IV        +     +  ++L L Y +T     LP  V + L   ++
Sbjct: 611 -------AYIAEIVRGGIEAVPAG--QMEASRSLGLPYATTMRKVILPQAVKLMLPNFIN 661

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                L     +    +   F +  I ++    +F
Sbjct: 662 QFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 696


>gi|312869289|ref|ZP_07729456.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095163|gb|EFQ53440.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 502

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +F    +     I V + ++G ++ +    L R    K    + + YI    I G P 
Sbjct: 296 YWTFFVKGVKYTLLITVLAVIVGFLIGVL-FALMRLSDNKLLHGIAICYIEF--IRGTPM 352

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   Y           F         P  ++  IA++  + A++AEI+RSG+ ++P 
Sbjct: 353 LVQIMFVY-----------FGIGAIIQSMPALVAGIIAVAINSGAYVAEIIRSGIQSLPL 401

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG+T ++  R +++PQA+++I P L ++++ LLK+SSL   +G  +L+    
Sbjct: 402 GQTEAARSLGMTKQQTFRYIIMPQALKNIWPALGNEFITLLKDSSLVSTIGVTELMYQTQ 461

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   T + +  + I M IY  L+  +   +N    K  
Sbjct: 462 LVQADTYKGVLPLFITMMIYFFLTFTLTRILNHFEKKFK 500



 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 36/78 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY T  + G   T  +    +I   +IG L    RLS NKL+  I   Y+E  R  P LV
Sbjct: 295 SYWTFFVKGVKYTLLITVLAVIVGFLIGVLFALMRLSDNKLLHGIAICYIEFIRGTPMLV 354

Query: 144 VIFFLYKSVLSVLPIPDH 161
            I F+Y  + +++     
Sbjct: 355 QIMFVYFGIGAIIQSMPA 372


>gi|259503172|ref|ZP_05746074.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259168829|gb|EEW53324.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 502

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +F    ++    I V S + G +L      L R    K    + + YI    I G P 
Sbjct: 295 YWTFFAKGVEYTLIITVISVIFGFLLGTI-FALMRLSQSKFLHGIAICYIEF--IRGTPM 351

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   Y           F         P  ++  IA+S  + A++AE++RSG+ ++P 
Sbjct: 352 LVQIMFVY-----------FGIGAIIQSMPALVAGIIAVSVNSGAYVAEVIRSGIQSLPV 400

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG+T ++  R ++LPQA+R+I P L ++++ LLK+SSL   +G  +L+    
Sbjct: 401 GQTEAARSLGMTKKQTFRFIVLPQALRNIWPALGNEFITLLKDSSLVSTIGVGELMYQTQ 460

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   T + +  + I M IY  L+  +   +N    ++ 
Sbjct: 461 LVQADTYKGVLPLFITMMIYFILTFTLTRILNYFEGRMK 499



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 35/78 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY T    G   T  +    +I   ++GT+    RLS +K +  I   Y+E  R  P LV
Sbjct: 294 SYWTFFAKGVEYTLIITVISVIFGFLLGTIFALMRLSQSKFLHGIAICYIEFIRGTPMLV 353

Query: 144 VIFFLYKSVLSVLPIPDH 161
            I F+Y  + +++     
Sbjct: 354 QIMFVYFGIGAIIQSMPA 371


>gi|319892895|ref|YP_004149770.1| Glutamate ABC transporter, periplasmic glutamine- binding protein
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162591|gb|ADV06134.1| Glutamate ABC transporter, periplasmic glutamine- binding protein
           [Staphylococcus pseudintermedius HKU10-03]
          Length = 486

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 14/246 (5%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
           ++L+         +   G FL   G  F T    T   I +   VLG V       L + 
Sbjct: 255 NLLAKYEKIAADAMQDDGSFLTKYGAFFLTGIKSTIV-ISLIGVVLGAVFGSM-FALMKI 312

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +  K     YI    + G P LV + L +   F    +   +          F+   
Sbjct: 313 STIRPLKWFASAYIEF--LRGTPLLVQVFLVF---FGTTAVLGLDI-------SAFICGA 360

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    +A+IAEI+R+G+ AV +GQMEAA +LGL++ +  + V++PQA++ I+P L ++
Sbjct: 361 IALVINCSAYIAEIIRAGINAVDKGQMEAARSLGLSYSQTMKSVIMPQAIKKILPALGNE 420

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K SS+   +G ++++     +   +      +LI   ++  L+  ++  M+ L  
Sbjct: 421 FVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTPLLIAAVLFFILTFTLSRLMSFLEG 480

Query: 391 KIALKE 396
           ++++ +
Sbjct: 481 RMSISD 486



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 33/71 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G  +T  ++  G++   + G++    ++S  + + W    Y+E  R  P LV 
Sbjct: 278 YGAFFLTGIKSTIVISLIGVVLGAVFGSMFALMKISTIRPLKWFASAYIEFLRGTPLLVQ 337

Query: 145 IFFLYKSVLSV 155
           +F ++    +V
Sbjct: 338 VFLVFFGTTAV 348


>gi|309813087|ref|ZP_07706813.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308432971|gb|EFP56877.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 495

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 14/210 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +   SF +G+VL+L    L+R            ++IS F   G P LV +A+ +   F  
Sbjct: 300 LTAASFAIGLVLALGV-ALARMSANAALSWPARIFISIF--RGTPLLVQLAIIF---FGM 353

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L       G  +SP + S  IA S   AA+ AEI+R+ +++VP+GQ EAA  +G+   
Sbjct: 354 PQL-------GIKLSP-WPSAIIAFSLNVAAYSAEIIRAAILSVPKGQWEAAETIGMNRA 405

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R ++LPQA+R  +PPL++  ++L+K++SLA  +   ++          +G  +E+  
Sbjct: 406 TALRRIILPQALRVAVPPLSNTLISLVKDTSLASTILVTEMFRQAQIAAAPSGDFLELYG 465

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   IY +L  +++L   RL  ++     +
Sbjct: 466 VAAAIYWALCFILSLVQGRLENRLGRHVAR 495



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    ++     T  L  +      ++   V   R+SAN  ++W  R+++ +FR  P 
Sbjct: 283 KNNIGPMLVATLKGTIPLTAASFAIGLVLALGVALARMSANAALSWPARIFISIFRGTPL 342

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +  ++  +  +               LN
Sbjct: 343 LVQLAIIFFGMPQLGIKLSPWPSAIIAFSLN 373


>gi|110798792|ref|YP_696773.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding
           protein/permease [Clostridium perfringens ATCC 13124]
 gi|168208796|ref|ZP_02634421.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens B str. ATCC 3626]
 gi|168212869|ref|ZP_02638494.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens CPE str. F4969]
 gi|168215721|ref|ZP_02641346.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens NCTC 8239]
 gi|110673439|gb|ABG82426.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens ATCC 13124]
 gi|170713169|gb|EDT25351.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715496|gb|EDT27678.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens CPE str. F4969]
 gi|182382310|gb|EDT79789.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens NCTC 8239]
          Length = 502

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    +   +      ++    + VF  +LG+++ +    + R +     K +  +YIS 
Sbjct: 285 FDFMYSLDLIPMLLKAINVTISLSVFGMILGLIVGIAL-AMIRVYKIPVLKQIAEVYISF 343

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P LV + L   L+F  P +     I        F +  I L    +A+IAEI+R
Sbjct: 344 F--RGTPLLVQLFL---LYFGVPQV-----IPSLQNMSAFTAALIGLGLNASAYIAEILR 393

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S + A+ +GQMEA ++LG+T  +A + V+LPQA R  IPPL + +++ +K SSLA  +G 
Sbjct: 394 SSIDAIDKGQMEACLSLGMTRAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGV 453

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L++        + +  E  ++   +Y  +          L  K+++ 
Sbjct: 454 VELLAKAQMEAAASYKFFESYVVVAIMYWIIIGFFNYLQKILEKKLSVY 502



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 69  GFEIDQGI--VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           GF+    +  +P          +L     T  L+  GMI   I+G  +   R+    ++ 
Sbjct: 284 GFDFMYSLDLIPM---------LLKAINVTISLSVFGMILGLIVGIALAMIRVYKIPVLK 334

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            I  VY+  FR  P LV +F LY  V  V+P   +    
Sbjct: 335 QIAEVYISFFRGTPLLVQLFLLYFGVPQVIPSLQNMSAF 373


>gi|323464072|gb|ADX76225.1| glutamine-binding periplasmic protein [Staphylococcus
           pseudintermedius ED99]
          Length = 486

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 116/246 (47%), Gaps = 14/246 (5%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
           ++L+         +   G FL   G  F T    T   I +   VLG V       L + 
Sbjct: 255 NLLAKYEKIAADAMQDDGSFLTKYGAFFLTGIKSTIV-ISLIGVVLGAVFGSM-FALMKI 312

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +  K     YI    + G P LV + L +   F    +   +          F+   
Sbjct: 313 STIRPLKWFASAYIEF--LRGTPLLVQVFLVF---FGTTAVLGLDI-------SAFICGA 360

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    +A+IAEI+R+G+ AV +GQMEAA +LGL++ +  + V++PQA++ I+P L ++
Sbjct: 361 IALVINCSAYIAEIIRAGINAVDKGQMEAARSLGLSYSQTIKSVIMPQAIKKILPALGNE 420

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ ++K SS+   +G ++++     +   +      +LI   +Y  L+  ++  M+ L  
Sbjct: 421 FVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTPLLIAAVLYFILTFTLSRLMSFLEG 480

Query: 391 KIALKE 396
           ++++ +
Sbjct: 481 RMSISD 486



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 33/71 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G  +T  ++  G++   + G++    ++S  + + W    Y+E  R  P LV 
Sbjct: 278 YGAFFLTGIKSTIVISLIGVVLGAVFGSMFALMKISTIRPLKWFASAYIEFLRGTPLLVQ 337

Query: 145 IFFLYKSVLSV 155
           +F ++    +V
Sbjct: 338 VFLVFFGTTAV 348


>gi|85716215|ref|ZP_01047189.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           sp. Nb-311A]
 gi|85696887|gb|EAQ34771.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           sp. Nb-311A]
          Length = 298

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 103/279 (36%), Positives = 154/279 (55%), Gaps = 2/279 (0%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVH--NISVQIILALLLTVIFLWCVNNVYNNMEKSNLSL 59
              +RK   ++F R++     R     +++Q +  ++LT      V N   N+E  +++ 
Sbjct: 20  AVKSRKPPLQFFLRLRRALGGRAGWGGLALQALFIVVLTWAGYEIVANAKGNLEAQHIAS 79

Query: 60  GIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119
           G+GF+S  AGF + Q ++PY+   SY    LVG VNT  +A  G+  AT+IG LV  GRL
Sbjct: 80  GLGFMSNTAGFGVSQTLLPYSETDSYTRVFLVGLVNTLVVAAVGIFFATVIGFLVALGRL 139

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           S N L++ I   YVE+ RN+P L  I F Y +VLS LP P  SI +  G+FL+NRGL  P
Sbjct: 140 SPNWLISRIAGGYVELVRNLPLLFQILFWYLAVLSTLPSPKQSISVFDGIFLSNRGLVIP 199

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                     F+ + V+ I+  +     SR    ++G+AL +   +  L+ GLP   ++ 
Sbjct: 200 KPVGYEGLIAFIMAVVVAIIGCMMLRNRSRRGLFRSGRALVVWPYALGLLIGLPAAAMVI 259

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                 F+ PVL  FNF+GG+ + PEF++L IALS YTA
Sbjct: 260 FGVPFTFEMPVLKGFNFVGGAHLIPEFVALAIALSTYTA 298


>gi|116872260|ref|YP_849041.1| glutamine ABC transporter binding and transport protein, putative
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741138|emb|CAK20258.1| glutamine ABC transporter binding and transport protein, putative
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 480

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRLR 478



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|256849332|ref|ZP_05554765.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|256714108|gb|EEU29096.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
          Length = 494

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 14/223 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + + +    +     I +FS ++GI+L +    L R    K    + + YI    I 
Sbjct: 283 TMTKYIPYFIKGVGYTIVITIFSVLIGIILGMLL-ALMRLSKNKLLHWIAVCYIEF--IR 339

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V I   Y           F      +     ++  IA+   + A++AE +RSG+ 
Sbjct: 340 GTPQMVQILFVY-----------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIA 388

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQ EAA +LGL+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+
Sbjct: 389 SVAKGQTEAARSLGLSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELM 448

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   T + +  + I M IY  ++  +   +N    ++ 
Sbjct: 449 YQTELIQTSTYRGVLPLFIAMIIYFIMTFTLTRLLNYFERRMK 491



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T  +    ++   I+G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 287 YIPYFIKGVGYTIVITIFSVLIGIILGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQ 346

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 347 ILFVYFGV 354


>gi|217965060|ref|YP_002350738.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes HCC23]
 gi|290892961|ref|ZP_06555951.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|217334330|gb|ACK40124.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes HCC23]
 gi|290557537|gb|EFD91061.1| glutamine ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|307570380|emb|CAR83559.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes L99]
          Length = 480

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLR 478



 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|16799914|ref|NP_470182.1| hypothetical protein lin0840 [Listeria innocua Clip11262]
 gi|16413291|emb|CAC96072.1| lin0840 [Listeria innocua Clip11262]
 gi|313619849|gb|EFR91431.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria innocua FSL S4-378]
          Length = 480

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRLR 478



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|225868288|ref|YP_002744236.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225701564|emb|CAW98789.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 721

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 23/211 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFH------EKTGKALPLLYISTFLIFGLPTLVLIALK 241
             F  + V+GIV  + A   S              + +PL+ ++ F+ +G+P L+     
Sbjct: 527 ISFAIALVIGIVFGMMAVSPSSSLRTVSTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTG 586

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +Q   +                 +F++  IALS    A+IAEIVR G+ AVP GQMEA+ 
Sbjct: 587 HQSPIN-----------------DFVAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASR 629

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL++    R ++LPQA++ ++P   +Q++  LK++++  A+G  +L   G  II +  
Sbjct: 630 SLGLSYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNY 689

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q+  +  I   IYL +  ++     RL  ++
Sbjct: 690 QSFRMYAILAVIYLIMITLLTRLAKRLEKRL 720



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 62/179 (34%), Gaps = 13/179 (7%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
                A +IG + G   +S +  +  +  ++V+V R IP ++V  F++  V +++     
Sbjct: 527 ISFAIALVIGIVFGMMAVSPSSSLRTVSTIFVDVVRGIPLMIVAAFIFWGVPNLIESMTG 586

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         LS               +++  IV        +     +  ++L L
Sbjct: 587 HQSPINDFVAATIALSLNGG-----------AYIAEIVRGGIEAVPAG--QMEASRSLGL 633

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            Y +T     LP  + + L   ++     L     +    +   F +  I ++    +F
Sbjct: 634 SYHTTMRRIILPQAIKLMLPNFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSF 692


>gi|300215129|gb|ADJ79545.1| Amino acid ABC transporter [Lactobacillus salivarius CECT 5713]
          Length = 499

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             ++    ++    I V S ++G VL +    L R  H K    L + YI    I G P 
Sbjct: 293 YWTYFAKGIEYTLIITVVSVLIGFVLGIIL-ALMRLGHNKLLHGLAVAYIEF--IRGTPL 349

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   Y           F         P   +  IA+S  + A++AE++RSG+ ++  
Sbjct: 350 MVQVMFVY-----------FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAI 398

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++ ++  + V++PQA+++I P L ++++ L+K SS+   +G  DL+    
Sbjct: 399 GQTEAARSLGMSQKQTYQYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQ 458

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +N    K+ 
Sbjct: 459 LVQSATYKGVAPLAITMVIYFVLTFTLSKGLNYFEGKMK 497



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY T    G   T  +    ++   ++G ++   RL  NKL+  +   Y+E  R  P +V
Sbjct: 292 SYWTYFAKGIEYTLIITVVSVLIGFVLGIILALMRLGHNKLLHGLAVAYIEFIRGTPLMV 351

Query: 144 VIFFLYKSVLSV 155
            + F+Y  + +V
Sbjct: 352 QVMFVYFGIGAV 363


>gi|313624521|gb|EFR94518.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria innocua FSL J1-023]
          Length = 480

 Score =  186 bits (473), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRLR 478



 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|259502421|ref|ZP_05745323.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259169564|gb|EEW54059.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 502

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +F    ++    I V + + G ++ +    L R    K   ++ + YI    I G P 
Sbjct: 296 YWTFFVKGVEYTLLITVLAVICGFLIGIL-FALMRLSSSKLLHSIAICYIEF--IRGTPM 352

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   Y           F         P  ++  IA++  + A++AEI+RSG+ ++P 
Sbjct: 353 LVQIMFVY-----------FGIGAIIQSMPALVAGIIAVAINSGAYVAEIIRSGIQSLPL 401

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG+T R+  R V++PQA+++I P L ++++ LLK+SSL   +G  +L+    
Sbjct: 402 GQTEAARSLGMTKRQTFRYVIMPQALKNIWPALGNEFITLLKDSSLVSTIGVTELMYQTQ 461

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   T + +  + I M IY  L+  +   +N    K 
Sbjct: 462 LVQADTYKGVLPLFITMMIYFFLTFTLTRILNHFEKKF 499



 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 37/78 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY T  + G   T  +    +I   +IG L    RLS++KL+  I   Y+E  R  P LV
Sbjct: 295 SYWTFFVKGVEYTLLITVLAVICGFLIGILFALMRLSSSKLLHSIAICYIEFIRGTPMLV 354

Query: 144 VIFFLYKSVLSVLPIPDH 161
            I F+Y  + +++     
Sbjct: 355 QIMFVYFGIGAIIQSMPA 372


>gi|320143581|gb|EFW35361.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
          Length = 467

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 242 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 300

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 301 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 348

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 349 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 408

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +++   +Y  L+ ++   MN +  ++   +
Sbjct: 409 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVAAALYFVLTFVLTRIMNMIEGRLNASD 467



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 316

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 317 VQVFIVFFGITAA 329


>gi|159029917|emb|CAO90296.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 503

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 12/225 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             +G    N  +     T+      F+F  + G ++++           K  K +  +Y+
Sbjct: 276 FNWGELFYNLIVKGVPWTILLTVLSFLFGLIGGTLVAIAL-----ISPYKWLKIICRIYV 330

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV + L Y   F  P L  F  IG +       +   ALS   AA++AEI
Sbjct: 331 DFF--RGTPMLVQLFLIY---FGLPGL--FREIGLNIDLDRLPAALFALSLNVAAYLAEI 383

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ ++  GQ EA  +LG++  +    V+ PQA R ++PPL ++++ L+K++SLA  +
Sbjct: 384 MRGGIQSIDNGQWEACSSLGMSPVQTMHEVIFPQAFRRMLPPLGNEFITLIKDTSLAAVI 443

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           GF +L   G  ++  T +A EI +    +YL L+ + +L   RL 
Sbjct: 444 GFEELFRQGQLMVATTYKAFEIYIAVALVYLVLTTLSSLVFKRLE 488



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 33/71 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  L     +   I GTLV    +S  K +  ICR+YV+ FR  P LV +F +
Sbjct: 286 IVKGVPWTILLTVLSFLFGLIGGTLVAIALISPYKWLKIICRIYVDFFRGTPMLVQLFLI 345

Query: 149 YKSVLSVLPIP 159
           Y  +  +    
Sbjct: 346 YFGLPGLFREI 356


>gi|224476916|ref|YP_002634522.1| hypothetical protein Sca_1432 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421523|emb|CAL28337.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 491

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 14/247 (5%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
           K +++         +   G F       F T   +T   I +   VLG V       L +
Sbjct: 259 KGLITKYKESAAQAMEDDGSFFTKYSSFFITGIKNT-ILISIIGVVLGAVFGAIL-ALMK 316

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               K  K L  +YI    I G P LV + L +        L               +  
Sbjct: 317 LSSFKPLKWLATVYIEF--IRGTPLLVQVFLVFFGTTAALGLD----------ISAMICG 364

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IA+    AA+IAEI+R+G+ AV +GQ EAA +LGL + +  + ++LPQA+++I+P L +
Sbjct: 365 MIAMVINCAAYIAEIIRAGINAVDKGQTEAARSLGLGYGQTMKTIILPQAIKNILPALGN 424

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G ++++     +   +      +L+   +Y  L+ +++  M    
Sbjct: 425 EFVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTPLLVAAILYFILTFVLSRVMYFFE 484

Query: 390 AKIALKE 396
            ++ + +
Sbjct: 485 GRMKVSD 491



 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 37/71 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y++  + G  NT  ++  G++   + G ++   +LS+ K + W+  VY+E  R  P LV 
Sbjct: 283 YSSFFITGIKNTILISIIGVVLGAVFGAILALMKLSSFKPLKWLATVYIEFIRGTPLLVQ 342

Query: 145 IFFLYKSVLSV 155
           +F ++    + 
Sbjct: 343 VFLVFFGTTAA 353


>gi|227877868|ref|ZP_03995884.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844269|ref|ZP_05549755.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|262047651|ref|ZP_06020605.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|293380559|ref|ZP_06626618.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295691987|ref|YP_003600597.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus ST1]
 gi|312976974|ref|ZP_07788723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Lactobacillus crispatus CTV-05]
 gi|227862530|gb|EEJ70033.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613347|gb|EEU18550.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|260572051|gb|EEX28617.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|290922873|gb|EFD99816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295030093|emb|CBL49572.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus ST1]
 gi|310896302|gb|EFQ45367.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Lactobacillus crispatus CTV-05]
          Length = 494

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 14/223 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + + +    +     I +FS ++GI+L +    L R    K    + + YI    I 
Sbjct: 283 TMTKYIPYFIKGVGYTIVITIFSVLIGIILGMLL-ALMRLSKNKLLHWIAVCYIEF--IR 339

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V I   Y           F      +     ++  IA+   + A++AE +RSG+ 
Sbjct: 340 GTPQMVQILFVY-----------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIA 388

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQ EAA +LGL+  KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+
Sbjct: 389 SVAKGQTEAARSLGLSQAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELM 448

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   T + +  + I M IY  ++  +   +N    ++ 
Sbjct: 449 YQTELIQTSTYRGVLPLFIAMIIYFIMTFTLTRLLNYFERRMK 491



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T  +    ++   I+G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 287 YIPYFIKGVGYTIVITIFSVLIGIILGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQ 346

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 347 ILFVYFGV 354


>gi|293366163|ref|ZP_06612849.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319685|gb|EFE60045.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 472

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 20/273 (7%)

Query: 130 RVYVEVFRNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           +  + V +N P L+      +     K+++          +   G F++  G  F     
Sbjct: 214 QTCIAVPKNSPVLLDKLNQTIDNVKEKNLIDQYMTKAAEDMQDDGNFISKYGSFFIKGIK 273

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +T     V   VLG +L  F   L +    +  + +  +YI    + G P LV + + + 
Sbjct: 274 NTILISLV-GVVLGSILGSFI-ALLKISKIRPLQWIASIYIEF--LRGTPMLVQVFIVFF 329

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L               +   IAL   ++A+IAEI+R+G+ AV +GQ EAA +L
Sbjct: 330 GTTAALGLD----------ISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSL 379

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +R+  + V++PQA++ I+P L ++++ L+K SS+   +G ++++     +   +   
Sbjct: 380 GLNYRQTMQSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDP 439

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+   +Y  L+  +   MN +  +++  +
Sbjct: 440 FTPLLVAALLYFLLTFALTRVMNFIEGRMSASD 472



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 38/73 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  + G  NT  ++  G++  +I+G+ +   ++S  + + WI  +Y+E  R  P L
Sbjct: 262 SKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRPLQWIASIYIEFLRGTPML 321

Query: 143 VVIFFLYKSVLSV 155
           V +F ++    + 
Sbjct: 322 VQVFIVFFGTTAA 334


>gi|118470254|ref|YP_890525.1| glutamine-binding periplasmic protein/glutamine transporter
           permease [Mycobacterium smegmatis str. MC2 155]
 gi|118171541|gb|ABK72437.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Mycobacterium smegmatis str. MC2 155]
          Length = 475

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              + +         +     + + SF +G+V++L    L+R         +  LYIS  
Sbjct: 259 WQLIGDNLWPLAKAAVTMTIPLTIISFAIGLVIALGV-ALARLSSNAVLSNVARLYIS-- 315

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV + L +        L +F           F +  IA S     + AEI+R+
Sbjct: 316 IIRGTPLLVQLFLVFY------ALPEFG-----VRIDPFPAAVIAFSLNVGGYAAEIIRA 364

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++++P+GQ EAA  +GLT+ K+ + ++LPQA R  +PPL++  ++L+K++SLA  +   
Sbjct: 365 AILSIPKGQWEAAETIGLTYGKSLQRIILPQAARVAVPPLSNTLISLVKDTSLASTILVT 424

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+         T +   +       Y  + ++++   +R+  ++     +
Sbjct: 425 ELLRQAQIAAAPTFEFFALYGTAAVYYWVICLVLSFGQSRIERRLERYVAR 475



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L         +I   V   RLS+N +++ + R+Y+ + R  P LV +F ++ ++   
Sbjct: 277 TIPLTIISFAIGLVIALGVALARLSSNAVLSNVARLYISIIRGTPLLVQLFLVFYALPEF 336

Query: 156 LPIPDHSIVLPFGMFLN 172
               D          LN
Sbjct: 337 GVRIDPFPAAVIAFSLN 353


>gi|224500426|ref|ZP_03668775.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes Finland 1988]
 gi|254827790|ref|ZP_05232477.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258600171|gb|EEW13496.1| glutamine ABC transporter [Listeria monocytogenes FSL N3-165]
          Length = 480

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLR 478



 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|47092054|ref|ZP_00229847.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|226223465|ref|YP_002757572.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes Clip81459]
 gi|254823885|ref|ZP_05228886.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254852338|ref|ZP_05241686.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|254931228|ref|ZP_05264587.1| glutamine ABC transporter [Listeria monocytogenes HPB2262]
 gi|254993068|ref|ZP_05275258.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes FSL J2-064]
 gi|300765789|ref|ZP_07075764.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|47019494|gb|EAL10234.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|225875927|emb|CAS04631.1| Putative Glutamine ABC transporter (binding and transport protein)
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258605645|gb|EEW18253.1| glutamine ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293582776|gb|EFF94808.1| glutamine ABC transporter [Listeria monocytogenes HPB2262]
 gi|293593110|gb|EFG00871.1| glutamine ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300513483|gb|EFK40555.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|328467121|gb|EGF38211.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes 1816]
 gi|328475546|gb|EGF46305.1| Glutamine ABC transporter (binding and transport protein) [Listeria
           monocytogenes 220]
          Length = 480

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLR 478



 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|47094853|ref|ZP_00232467.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|254898981|ref|ZP_05258905.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes J0161]
 gi|254911531|ref|ZP_05261543.1| glutamine ABC transporter [Listeria monocytogenes J2818]
 gi|254935857|ref|ZP_05267554.1| glutamine ABC transporter [Listeria monocytogenes F6900]
 gi|47016735|gb|EAL07654.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258608445|gb|EEW21053.1| glutamine ABC transporter [Listeria monocytogenes F6900]
 gi|293589477|gb|EFF97811.1| glutamine ABC transporter [Listeria monocytogenes J2818]
          Length = 480

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLR 478



 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|169343527|ref|ZP_02864526.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens C str. JGS1495]
 gi|169298087|gb|EDS80177.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens C str. JGS1495]
          Length = 519

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    +   +      ++    + VF  +LG+++ +    + R +     K +  +YIS 
Sbjct: 302 FDFMYSLDLIPMLLKAINVTISLSVFGMILGLIVGIAL-AMIRVYKIPVLKQIAEVYISF 360

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P LV + L   L+F  P +     I        F +  I L    +A+IAEI+R
Sbjct: 361 F--RGTPLLVQLFL---LYFGVPQV-----IPSLQNMSAFTAALIGLGLNASAYIAEILR 410

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S + A+ +GQMEA ++LG+T  +A + V+LPQA R  IPPL + +++ +K SSLA  +G 
Sbjct: 411 SSIDAIDKGQMEACLSLGMTRAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGV 470

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L++        + +  E  ++   +Y  +          L  K+++ 
Sbjct: 471 VELLAKAQMEAAASYKFFESYVVVAIMYWIIIGFFNYLQKILEKKLSVY 519



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 69  GFEIDQGI--VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           GF+    +  +P          +L     T  L+  GMI   I+G  +   R+    ++ 
Sbjct: 301 GFDFMYSLDLIPM---------LLKAINVTISLSVFGMILGLIVGIALAMIRVYKIPVLK 351

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            I  VY+  FR  P LV +F LY  V  V+P   +    
Sbjct: 352 QIAEVYISFFRGTPLLVQLFLLYFGVPQVIPSLQNMSAF 390


>gi|257869222|ref|ZP_05648875.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257803386|gb|EEV32208.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 718

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + ++GI+L LF+    R      G       I   +I G
Sbjct: 514 YKVLLKGLWNTLLLALISFALALIIGIILGLFSVSPIRALRIFAG-------IYVDIIRG 566

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +VL    +    D                P+F +  I L+   +A+IAEIVR G+ A
Sbjct: 567 IPMMVLAFFIFFGLSDA----------IGITIPDFAAGVITLTLNASAYIAEIVRGGIKA 616

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGLT+ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+ 
Sbjct: 617 VPVGQMEASRSLGLTYTRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQ 676

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL +   +      L  K+ 
Sbjct: 677 TGKIIVARTTQSTYVYLIVAVMYLIVITALTKLAKVLEKKVK 718



 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G  NT  LA      A IIG ++G   +S  + +     +YV++ R IP +V+ 
Sbjct: 514 YKVLLKGLWNTLLLALISFALALIIGIILGLFSVSPIRALRIFAGIYVDIIRGIPMMVLA 573

Query: 146 FFLYKSV 152
           FF++  +
Sbjct: 574 FFIFFGL 580


>gi|46907078|ref|YP_013467.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes str. 4b F2365]
 gi|224503184|ref|ZP_03671491.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL R2-561]
 gi|254832188|ref|ZP_05236843.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes 10403S]
 gi|255520210|ref|ZP_05387447.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL J1-175]
 gi|284801176|ref|YP_003413041.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578]
 gi|284994318|ref|YP_003416086.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923]
 gi|46880345|gb|AAT03644.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|284056738|gb|ADB67679.1| hypothetical protein LM5578_0926 [Listeria monocytogenes 08-5578]
 gi|284059785|gb|ADB70724.1| hypothetical protein LM5923_0880 [Listeria monocytogenes 08-5923]
          Length = 480

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLR 478



 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|283770942|ref|ZP_06343834.1| polar amino acid ABC transporter inner membrane subunit
           [Staphylococcus aureus subsp. aureus H19]
 gi|283461089|gb|EFC08179.1| polar amino acid ABC transporter inner membrane subunit
           [Staphylococcus aureus subsp. aureus H19]
          Length = 485

 Score =  186 bits (472), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 113/239 (47%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +P +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIPSIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIPSIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|168205901|ref|ZP_02631906.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens E str. JGS1987]
 gi|182624018|ref|ZP_02951806.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens D str. JGS1721]
 gi|170662631|gb|EDT15314.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens E str. JGS1987]
 gi|177910911|gb|EDT73265.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens D str. JGS1721]
          Length = 519

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    +   +      ++    + VF  +LG+++ +    + R +     K +  +YIS 
Sbjct: 302 FDFMYSLDLIPMLLKAINVTISLSVFGMILGLIVGIAL-AMIRVYKIPVLKQIAEVYISF 360

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P LV + L   L+F  P +     I        F +  I L    +A+IAEI+R
Sbjct: 361 F--RGTPLLVQLFL---LYFGVPQV-----IPSLQNMSAFTAALIGLGLNASAYIAEILR 410

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S + A+ +GQMEA ++LG+T  +A + V+LPQA R  IPPL + +++ +K SSLA  +G 
Sbjct: 411 SSIDAIDKGQMEACLSLGMTRAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGV 470

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L++        + +  E  ++   +Y  +          L  K+++ 
Sbjct: 471 VELLAKAQMEAAASYKFFESYVVVAIMYWIIIGFFNYLQKILEKKLSVY 519



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 69  GFEIDQGI--VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           GF+    +  +P          +L     T  L+  GMI   I+G  +   R+    ++ 
Sbjct: 301 GFDFMYSLDLIPM---------LLKAINVTISLSVFGMILGLIVGIALAMIRVYKIPVLK 351

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            I  VY+  FR  P LV +F LY  V  V+P   +    
Sbjct: 352 QIAEVYISFFRGTPLLVQLFLLYFGVPQVIPSLQNMSAF 390


>gi|145221824|ref|YP_001132502.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145214310|gb|ABP43714.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
          Length = 503

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     + + SFV+G+V++L    L+R         L   YIS  +I G P L
Sbjct: 295 WPLAKAALTMTIPLTIISFVIGLVIALGV-ALARLSSNVVLSNLARFYIS--VIRGTPLL 351

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +           F           F +  IA S     + AEI+RS + ++P+G
Sbjct: 352 VQLFIVF-----------FALPEFGVKIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKG 400

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +GL +    R ++LPQA R  +PPL++  ++L+K++SLA  +   +L+     
Sbjct: 401 QWEAAETIGLNYVGTLRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQI 460

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I   T +   +       Y  + ++++    R   ++     +
Sbjct: 461 IAAPTFEFFALYGTAAVYYWVICLVLSFGQARFEHRLERYVAR 503



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 59/192 (30%), Gaps = 10/192 (5%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
                T  L     +   +I   V   RLS+N +++ + R Y+ V R  P LV +F ++ 
Sbjct: 300 AALTMTIPLTIISFVIGLVIALGVALARLSSNVVLSNLARFYISVIRGTPLLVQLFIVFF 359

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGL--------SFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++       D          LN  G                   A   +    +G +  +
Sbjct: 360 ALPEFGVKIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYVGTLRRI 419

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              + +R         L  L   T L      LV   L+       P    F   G + V
Sbjct: 420 ILPQATRVAVPPLSNTLISLVKDTSL--ASTILVTELLRQAQIIAAPTFEFFALYGTAAV 477

Query: 263 SPEFMSLYIALS 274
               + L ++  
Sbjct: 478 YYWVICLVLSFG 489


>gi|110801621|ref|YP_699371.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Clostridium perfringens SM101]
 gi|110682122|gb|ABG85492.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Clostridium
           perfringens SM101]
          Length = 502

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    +   +      ++    + VF  +LG+++ +    + R +     K +  +YIS 
Sbjct: 285 FDFIYSLDLIPMLLKAINVTISLSVFGVILGLIVGIAL-AMIRVYKIPVLKQIAEVYISF 343

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P LV + L   L+F  P +     I        F +  I L    +A+IAEI+R
Sbjct: 344 F--RGTPLLVQLFL---LYFGVPQV-----IPSLQNMNAFTAALIGLGLNASAYIAEILR 393

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S + A+ +GQMEA ++LG+T  +A + V+LPQA R  IPPL + +++ +K SSLA  +G 
Sbjct: 394 SSIDAIDKGQMEACLSLGMTRAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGV 453

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L++        + +  E  ++   +Y  +          L  K+++ 
Sbjct: 454 VELLAKAQMEAAASYKFFESYVVVAIMYWIIIGFFNYLQKILEKKLSVY 502



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L+  G+I   I+G  +   R+    ++  I  VY+  FR  P LV +F L
Sbjct: 297 LLKAINVTISLSVFGVILGLIVGIALAMIRVYKIPVLKQIAEVYISFFRGTPLLVQLFLL 356

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  V  V+P   +    
Sbjct: 357 YFGVPQVIPSLQNMNAF 373


>gi|315302221|ref|ZP_07873138.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria ivanovii FSL F6-596]
 gi|313629411|gb|EFR97627.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria ivanovii FSL F6-596]
          Length = 480

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMLKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRVR 478



 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|323465692|gb|ADX69379.1| Glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus H10]
          Length = 494

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VFS ++GIVL +    L R    K    + + YI    I G P +V I   Y    
Sbjct: 299 IIITVFSVLIGIVLGMLL-ALMRLSKNKLLHWIAVCYIEF--IRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F      +     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 352 -------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLS 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 405 QAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 464

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + I M IY  ++  +   +N    ++   +
Sbjct: 465 LFIAMIIYFIMTFTLTRLLNYFERRMKYND 494



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 287 YAPYFVKGIEYTIIITVFSVLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQ 346

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 347 ILFVYFGV 354


>gi|315037375|ref|YP_004030943.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1112]
 gi|312275508|gb|ADQ58148.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1112]
          Length = 494

 Score =  185 bits (471), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VFS ++GIVL +    L R    K    + + YI    I G P +V I   Y    
Sbjct: 299 LVITVFSVLIGIVLGMLL-ALMRLSRNKLLHWIAVCYIEF--IRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F      +     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 352 -------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLS 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 405 QAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 464

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + I M IY  ++  +   +N    ++ 
Sbjct: 465 LFIAMIIYFIMTFTLTRLLNYFEKRMK 491



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 287 YAPYFVKGVGYTLVITVFSVLIGIVLGMLLALMRLSRNKLLHWIAVCYIEFIRGTPQMVQ 346

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 347 ILFVYFGV 354


>gi|325955845|ref|YP_004286455.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus acidophilus 30SC]
 gi|325332410|gb|ADZ06318.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus acidophilus 30SC]
 gi|327182680|gb|AEA31127.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus amylovorus GRL 1118]
          Length = 494

 Score =  185 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VFS ++GIVL +    L R    K    + + YI    I G P +V I   Y    
Sbjct: 299 IVITVFSVLIGIVLGMLL-ALMRLSRNKLLHWIAVCYIEF--IRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F      +     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 352 -------FGVGALISNLSAVVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLS 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 405 QAKAYRYVIIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 464

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + I M IY  ++  +   +N    ++ 
Sbjct: 465 LFIAMIIYFIMTFTLTRLLNYFEKRMK 491



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 287 YAPYFVKGVGYTIVITVFSVLIGIVLGMLLALMRLSRNKLLHWIAVCYIEFIRGTPQMVQ 346

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 347 ILFVYFGV 354


>gi|16802888|ref|NP_464373.1| hypothetical protein lmo0847 [Listeria monocytogenes EGD-e]
 gi|16410235|emb|CAC98925.1| lmo0847 [Listeria monocytogenes EGD-e]
          Length = 480

 Score =  185 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLR 478



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 274 WPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|322385682|ref|ZP_08059326.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321270420|gb|EFX53336.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 724

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 11/221 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS   +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 514 YKQLLSGLGITIALALISFAIAMVIGIIFGMFS-----VSPIKALRIISEIFVD--VIRG 566

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P ++L A  +      P L + +  G  +   +F++  IALS    A+IAEIVR G+ A
Sbjct: 567 IPLMILAAFIFW---GIPNLLE-SMTGQQSPINDFVAGTIALSLNAGAYIAEIVRGGIQA 622

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L  
Sbjct: 623 VPVGQMEASRSLGISYGKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQ 682

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  Q+ ++  I   +YL +  ++     RL  +I
Sbjct: 683 TGKIIIARNYQSFKMYAILAVLYLVIITLLTRLAKRLEKRI 723



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 517 LLSGLGITIALALISFAIAMVIGIIFGMFSVSPIKALRIISEIFVDVIRGIPLMILAAFI 576

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + ++L           G           T+ +  NA  ++   V G + ++      
Sbjct: 577 FWGIPNLLESMT-------GQQSPINDFVAGTIALSLNAGAYIAEIVRGGIQAVPVG--- 626

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP    I L   ++     L     +    +   F +
Sbjct: 627 ---QMEASRSLGISYGKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQT 683

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 684 GKIIIARNYQSF 695


>gi|315281521|ref|ZP_07870132.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria marthii FSL S4-120]
 gi|313614833|gb|EFR88366.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria marthii FSL S4-120]
          Length = 480

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFM-----KVSNNKILRGIATVYVDIF--RG 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 327 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 376

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL ++KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 377 VDKGQMEAARSLGLPYKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 436

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 437 SGKIIMARTFESTWTWLIIGIMYLIVITILTKVSDRLERRLR 478



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S NK++  I  VYV++FR  P +V  
Sbjct: 274 WPALLAGMWLTIRLAVVSLIIAFIIGITFGFMKVSNNKILRGIATVYVDIFRGTPLIVQA 333

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 334 FFFYFGIPAA 343


>gi|319401122|gb|EFV89341.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Staphylococcus epidermidis FRI909]
          Length = 485

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 20/273 (7%)

Query: 130 RVYVEVFRNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           +  + V +N P L+      +     K+++          +   G F++  G  F     
Sbjct: 227 QTCIAVPKNSPVLLDKLNQTIDNVKEKNLIDQYMTKAAEDMQDDGNFISKYGSFFIKGIK 286

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +T     V   VLG +L  F   L +    +  + +  +YI    + G P LV + + + 
Sbjct: 287 NTILISLV-GVVLGSILGSFI-ALLKLSKIRPLQWIAGIYIEF--LRGTPMLVQVFIVFF 342

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L               +   IAL   ++A+IAEI R+G+ AV +GQ EAA +L
Sbjct: 343 GTTAALGLD----------ISALICGTIALVINSSAYIAEIFRAGINAVDKGQTEAARSL 392

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ +R+  + V++PQA++ I+P L ++++ L+K SS+   +G ++++     +   +   
Sbjct: 393 GMNYRQTMQSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDP 452

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+   +Y  L+  +   MN +  +++  +
Sbjct: 453 FTPLLVAALLYFLLTFALTRVMNFIEGRMSASD 485



 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 38/73 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  + G  NT  ++  G++  +I+G+ +   +LS  + + WI  +Y+E  R  P L
Sbjct: 275 SKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKLSKIRPLQWIAGIYIEFLRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++    + 
Sbjct: 335 VQVFIVFFGTTAA 347


>gi|312830230|emb|CBX35072.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Staphylococcus aureus subsp. aureus ECT-R 2]
          Length = 485

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 113/239 (47%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L +F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGVFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGVFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|242243079|ref|ZP_04797524.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
 gi|242233427|gb|EES35739.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis W23144]
          Length = 485

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 20/273 (7%)

Query: 130 RVYVEVFRNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           +  + V +N P L+      +     K+++          +   G F++  G  F     
Sbjct: 227 QTCIAVPKNSPVLLDKLNQTIDNVKEKNLIDQYMTKAAEDMQDDGNFISKYGSFFIKGIK 286

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +T     V   VLG +L  F   L +    +  + +  +YI    + G P LV + + + 
Sbjct: 287 NTILISLV-GVVLGSILGSFI-ALLKLSKIRPLQWIAGIYIEF--LRGTPMLVQVFIVFF 342

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L               +   IAL   ++A+IAEI R+G+ AV +GQ EAA +L
Sbjct: 343 GTTAALGLD----------ISALICGTIALVINSSAYIAEIFRAGINAVDKGQTEAARSL 392

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ +R+  + V++PQA++ I+P L ++++ L+K SS+   +G ++++     +   +   
Sbjct: 393 GMNYRQTMQSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDP 452

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+   +Y  L+  +   MN +  +++  +
Sbjct: 453 FTPLLVAALLYFLLTFALTRVMNFIEGRMSASD 485



 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 38/73 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  + G  NT  ++  G++  +I+G+ +   +LS  + + WI  +Y+E  R  P L
Sbjct: 275 SKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKLSKIRPLQWIAGIYIEFLRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++    + 
Sbjct: 335 VQVFIVFFGTTAA 347


>gi|166365426|ref|YP_001657699.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166087799|dbj|BAG02507.1| amino-acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 503

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 +G    N        T+      F+F  + G ++++           K  K + 
Sbjct: 272 QESSFNWGELFYNLIFKGVPWTILLTVLSFLFGLIGGTLVAIAL-----ISPYKWLKIIC 326

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +Y+  F   G P LV + L Y   F  P L  F  IG +       +   ALS   AA+
Sbjct: 327 RIYVDFF--RGTPMLVQLFLIY---FGLPGL--FREIGLNIDLDRLPAALFALSLNVAAY 379

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ ++  GQ EA  +LG++  +    V+  QA R ++PPL ++++ L+K++SL
Sbjct: 380 LAEIMRGGIQSIDNGQWEACSSLGMSPVQTMHEVIFSQAFRRMLPPLGNEFITLIKDTSL 439

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           A  +GF +L   G  ++  T +A EI +    +YL L+ + ++   RL 
Sbjct: 440 AAVIGFEELFRQGQLMVATTYKAFEIYIAVAVVYLVLTTLSSVVFKRLE 488



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 32/71 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L     +   I GTLV    +S  K +  ICR+YV+ FR  P LV +F +
Sbjct: 286 IFKGVPWTILLTVLSFLFGLIGGTLVAIALISPYKWLKIICRIYVDFFRGTPMLVQLFLI 345

Query: 149 YKSVLSVLPIP 159
           Y  +  +    
Sbjct: 346 YFGLPGLFREI 356


>gi|300812584|ref|ZP_07093001.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496457|gb|EFK31562.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 500

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + S  +G+VL +    L R    K   A+ + YI    + G P +V I   Y    
Sbjct: 302 MIITICSITIGLVLGVI-FALMRLSKNKLLHAIAVCYIEF--LRGTPQMVQIMFVY---- 354

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F         P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 355 -------FGVGMLIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLS 407

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R V+ PQA+++I P L ++++ L K+SSL   +G  +L+   G +   T + +  
Sbjct: 408 QSKTYRYVVFPQALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMP 467

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + I M IY  ++ ++   +N    ++ L   +
Sbjct: 468 LFITMCIYFVVTFILTRLLNYFERRMNLTSSR 499



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S YA+    G   T  +    +    ++G +    RLS NKL+  I   Y+E  R  P +
Sbjct: 288 SKYASYFATGLGYTMIITICSITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQM 347

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           V I F+Y  V  ++     
Sbjct: 348 VQIMFVYFGVGMLIKNMPA 366


>gi|315446439|ref|YP_004079318.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|315264742|gb|ADU01484.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 487

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     + + SFV+G+V++L    L+R         L   YIS  +I G P L
Sbjct: 279 WPLAKAALTMTIPLTIISFVIGLVIALGV-ALARLSSNVVLSNLARFYIS--VIRGTPLL 335

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +           F           F +  IA S     + AEI+RS + ++P+G
Sbjct: 336 VQLFIVF-----------FALPEFGVKIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKG 384

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +GL +    R ++LPQA R  +PPL++  ++L+K++SLA  +   +L+     
Sbjct: 385 QWEAAETIGLNYVGTLRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQI 444

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I   T +   +       Y  + ++++    R   ++     +
Sbjct: 445 IAAPTFEFFALYGTAAVYYWVICLVLSFGQARFEHRLERYVAR 487



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 59/192 (30%), Gaps = 10/192 (5%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
                T  L     +   +I   V   RLS+N +++ + R Y+ V R  P LV +F ++ 
Sbjct: 284 AALTMTIPLTIISFVIGLVIALGVALARLSSNVVLSNLARFYISVIRGTPLLVQLFIVFF 343

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGL--------SFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++       D          LN  G                   A   +    +G +  +
Sbjct: 344 ALPEFGVKIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYVGTLRRI 403

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              + +R         L  L   T L      LV   L+       P    F   G + V
Sbjct: 404 ILPQATRVAVPPLSNTLISLVKDTSL--ASTILVTELLRQAQIIAAPTFEFFALYGTAAV 461

Query: 263 SPEFMSLYIALS 274
               + L ++  
Sbjct: 462 YYWVICLVLSFG 473


>gi|323438846|gb|EGA96583.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           O11]
          Length = 467

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 111/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 242 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKVIS 300

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 301 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 348

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA + GL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 349 SAYIAEIIRAGINAVDKGQMEAARSFGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 408

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 409 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 467



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 257 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKVISWIASIYIEILRGTPML 316

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 317 VQVFIVFFGITAA 329


>gi|15924848|ref|NP_372382.1| glutamine-binding periplasmic protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927432|ref|NP_374965.1| hypothetical protein SA1675 [Staphylococcus aureus subsp. aureus
           N315]
 gi|156980174|ref|YP_001442433.1| hypothetical protein SAHV_1843 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|13701651|dbj|BAB42944.1| SA1675 [Staphylococcus aureus subsp. aureus N315]
 gi|14247630|dbj|BAB58020.1| similar to glutamine-binding periplasmic protein [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|156722309|dbj|BAF78726.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|285817538|gb|ADC38025.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus aureus 04-02981]
          Length = 441

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 216 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 274

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 275 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 322

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 323 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 382

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 383 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 441



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 231 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 290

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 291 VQVFIVFFGITAA 303


>gi|18311075|ref|NP_563009.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|18145757|dbj|BAB81799.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
          Length = 502

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 11/229 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    +   +      ++    + VF  +LG+++ +    + R +     K +  +YIS 
Sbjct: 285 FDFMYSLDLIPMLLKAINVTISLSVFGMILGLIVGIAL-AMIRVYKIPVLKQIAEVYISF 343

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P LV + L   L+F  P +     I        F +  I L    +A+IAEI+R
Sbjct: 344 F--RGTPLLVQLFL---LYFGVPQV-----IPSLQNMSAFTAALIGLGLNASAYIAEILR 393

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S + A+ +GQMEA ++LG+T  +A + V+LPQA R  IPPL + +++ +K SSLA  +G 
Sbjct: 394 SSIDAIDKGQMEACLSLGMTMAQALKRVVLPQAFRIAIPPLGNIFVDTVKGSSLAFTLGV 453

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L++        + +  E  ++   +Y  +          L  K+++ 
Sbjct: 454 VELLAKAQMEAAASYKFFESYVVVAIMYWIIIGFFNYLQKILEKKLSVY 502



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 11/99 (11%)

Query: 69  GFEIDQGI--VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           GF+    +  +P          +L     T  L+  GMI   I+G  +   R+    ++ 
Sbjct: 284 GFDFMYSLDLIPM---------LLKAINVTISLSVFGMILGLIVGIALAMIRVYKIPVLK 334

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            I  VY+  FR  P LV +F LY  V  V+P   +    
Sbjct: 335 QIAEVYISFFRGTPLLVQLFLLYFGVPQVIPSLQNMSAF 373


>gi|260102147|ref|ZP_05752384.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260084037|gb|EEW68157.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
          Length = 494

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VFS ++GIVL +    L R    K    + + YI    I G P +V I   Y    
Sbjct: 299 IIITVFSVLIGIVLGMLL-ALMRLSKNKLLHWIAVCYIEF--IRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F      +     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 352 -------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLS 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 405 QAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 464

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + I M IY  ++  +   +N    ++ 
Sbjct: 465 LFIAMIIYFIMTFTLTRLLNYFERRMK 491



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 287 YAPYFVKGIEYTIIITVFSVLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQ 346

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 347 ILFVYFGV 354


>gi|238923861|ref|YP_002937377.1| amino acid ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
 gi|238875536|gb|ACR75243.1| amino acid ABC transporter, permease protein [Eubacterium rectale
           ATCC 33656]
          Length = 508

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 125/234 (53%), Gaps = 17/234 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS- 225
           +  F+ +    +    +     I +F+ +LGIVL  F   + R  H++ G    L  I  
Sbjct: 289 YDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLG-FLIAIVRTSHDRNGGLAILNGICK 347

Query: 226 --TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               +I G P ++ + + Y +               ++V+ + +   IA    +AA++AE
Sbjct: 348 AYLTIIRGTPVMIQLLIIYYVVL-------------ASVTNKILVAVIAFGLNSAAYVAE 394

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG+++V  GQ EA  +LGL +R+  +LV++PQA+++I+P L +++++LLK +S++  
Sbjct: 395 IVRSGIMSVDIGQFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGY 454

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G  DL   G  I + T +A   ++    IYL + ++++  +++L  ++   E+
Sbjct: 455 IGMMDLTKGGDIIRSNTYEAFIPLIAVALIYLVIVMLLSHGVSKLERRLRSNER 508



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 46/107 (42%), Gaps = 5/107 (4%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK---- 123
           +   I + +       +    I+ G  NT  +    ++   ++G L+   R S ++    
Sbjct: 280 SSIGIKEKLYDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLGFLIAIVRTSHDRNGGL 339

Query: 124 -LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            ++  IC+ Y+ + R  P ++ +  +Y  VL+ +       V+ FG+
Sbjct: 340 AILNGICKAYLTIIRGTPVMIQLLIIYYVVLASVTNKILVAVIAFGL 386


>gi|189023945|ref|YP_001934713.1| General L-amino acid transport system permease protein AAPQ
           [Brucella abortus S19]
 gi|254689007|ref|ZP_05152261.1| general L-amino acid transport system permease protein aapQ
           [Brucella abortus bv. 6 str. 870]
 gi|254697142|ref|ZP_05158970.1| general L-amino acid transport system permease protein aapQ
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730038|ref|ZP_05188616.1| general L-amino acid transport system permease protein aapQ
           [Brucella abortus bv. 4 str. 292]
 gi|256257257|ref|ZP_05462793.1| general L-amino acid transport system permease protein aapQ
           [Brucella abortus bv. 9 str. C68]
 gi|260883530|ref|ZP_05895144.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|189019517|gb|ACD72239.1| General L-amino acid transport system permease protein AAPQ
           [Brucella abortus S19]
 gi|260873058|gb|EEX80127.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
          Length = 227

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 88/216 (40%), Positives = 123/216 (56%)

Query: 11  RYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           +       LYD R   I  Q+++   +     W V N   N++++N++ G GFL  RAGF
Sbjct: 11  QGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQRANIASGFGFLYGRAGF 70

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG LVG GRLS N L+  IC 
Sbjct: 71  DISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICT 130

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NNRG   P+      A   
Sbjct: 131 VYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAV 190

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             + ++GI+ S    R ++     TG+    + +S 
Sbjct: 191 PVALLIGILASFAVARWAKRRQMATGQPFHTIRVSA 226


>gi|262050150|ref|ZP_06023004.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30]
 gi|262052687|ref|ZP_06024879.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3]
 gi|259159436|gb|EEW44488.1| hypothetical protein SA930_0823 [Staphylococcus aureus 930918-3]
 gi|259161775|gb|EEW46363.1| hypothetical protein SAD30_1114 [Staphylococcus aureus D30]
          Length = 441

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 216 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 274

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 275 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 322

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 323 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 382

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +++   +Y  L+ ++   MN +  ++   +
Sbjct: 383 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVAAALYFVLTFVLTRIMNMIEGRLNASD 441



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 231 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 290

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 291 VQVFIVFFGITAA 303


>gi|161506742|ref|YP_001576692.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus DPC 4571]
 gi|160347731|gb|ABX26405.1| Glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus helveticus DPC 4571]
          Length = 494

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VFS ++GIVL +    L R    K    + + YI    I G P +V I   Y    
Sbjct: 299 IIITVFSVLIGIVLGMLL-ALMRLSKNKLLHWIAVCYIEF--IRGTPQMVQILFVY---- 351

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F      +     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 352 -------FGVGALISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLS 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 405 QAKAYRYVIIPQALKNIWPALDNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 464

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + I M IY  ++  +   +N    ++ 
Sbjct: 465 LFIAMIIYFIMTFTLTRLLNYFERRMK 491



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   ++G L+   RLS NKL+ WI   Y+E  R  P +V 
Sbjct: 287 YAPYFVKGIEYTIIITVFSVLIGIVLGMLLALMRLSKNKLLHWIAVCYIEFIRGTPQMVQ 346

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 347 ILFVYFGV 354


>gi|291524539|emb|CBK90126.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Eubacterium rectale DSM
           17629]
          Length = 504

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 125/234 (53%), Gaps = 17/234 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS- 225
           +  F+ +    +    +     I +F+ +LGIVL  F   + R  H++ G    L  I  
Sbjct: 285 YDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLG-FLIAIVRTSHDRNGGLAILNGICK 343

Query: 226 --TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               +I G P ++ + + Y +               ++V+ + +   IA    +AA++AE
Sbjct: 344 AYLTIIRGTPVMIQLLIIYYVVL-------------ASVTNKILVAVIAFGLNSAAYVAE 390

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG+++V  GQ EA  +LGL +R+  +LV++PQA+++I+P L +++++LLK +S++  
Sbjct: 391 IVRSGIMSVDIGQFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGY 450

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G  DL   G  I + T +A   ++    IYL + ++++  +++L  ++   E+
Sbjct: 451 IGMMDLTKGGDIIRSNTYEAFIPLIAVALIYLVIVMLLSHGVSKLERRLRSNER 504



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 46/107 (42%), Gaps = 5/107 (4%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK---- 123
           +   I + +       +    I+ G  NT  +    ++   ++G L+   R S ++    
Sbjct: 276 SSIGIKEKLYDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLGFLIAIVRTSHDRNGGL 335

Query: 124 -LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            ++  IC+ Y+ + R  P ++ +  +Y  VL+ +       V+ FG+
Sbjct: 336 AILNGICKAYLTIIRGTPVMIQLLIIYYVVLASVTNKILVAVIAFGL 382


>gi|291527965|emb|CBK93551.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Eubacterium rectale
           M104/1]
          Length = 504

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 125/234 (53%), Gaps = 17/234 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS- 225
           +  F+ +    +    +     I +F+ +LGIVL  F   + R  H++ G    L  I  
Sbjct: 285 YDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLG-FLIAIVRTSHDRNGGLAILNGICK 343

Query: 226 --TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               +I G P ++ + + Y +               ++V+ + +   IA    +AA++AE
Sbjct: 344 AYLTIIRGTPVMIQLLIIYYVVL-------------ASVTNKILVAVIAFGLNSAAYVAE 390

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG+++V  GQ EA  +LGL +R+  +LV++PQA+++I+P L +++++LLK +S++  
Sbjct: 391 IVRSGIMSVDIGQFEAGRSLGLNYRQTMKLVIIPQAVKNILPALLNEFISLLKETSISGY 450

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G  DL   G  I + T +A   ++    IYL + ++++  +++L  ++   E+
Sbjct: 451 IGMMDLTKGGDIIRSNTYEAFIPLIAVALIYLVIVMLLSHGVSKLERRLRSNER 504



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 46/107 (42%), Gaps = 5/107 (4%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK---- 123
           +   I + +       +    I+ G  NT  +    ++   ++G L+   R S ++    
Sbjct: 276 SSIGIKEKLYDNFVKDNRYMYIVKGLGNTIVITIFAVMLGIVLGFLIAIVRTSHDRNGGL 335

Query: 124 -LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            ++  IC+ Y+ + R  P ++ +  +Y  VL+ +       V+ FG+
Sbjct: 336 AILNGICKAYLTIIRGTPVMIQLLIIYYVVLASVTNKILVAVIAFGL 382


>gi|302333524|gb|ADL23717.1| amino acid ABC transporter protein [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 485

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRMNASD 485



 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|58336481|ref|YP_193066.1| glutamine ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227903033|ref|ZP_04020838.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus acidophilus ATCC 4796]
 gi|58253798|gb|AAV42035.1| glutamine ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227869207|gb|EEJ76628.1| glutamine ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus acidophilus ATCC 4796]
          Length = 491

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I +FS ++GI+L +    L R    K    + + YI    I G P +V I   Y    
Sbjct: 296 IVITIFSVLIGIILGMLL-ALMRLSKNKLLHGIAVCYIEF--IRGTPQMVQILFVY---- 348

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F      +     ++  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 349 -------FGVGTLISNLSALVAGIIAIGLNSGAYVAEDIRSGIASVAKGQTEAARSLGLS 401

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA R V++PQA+++I P L ++++ LLK+SSL   +G  +L+     I   T + +  
Sbjct: 402 QAKAYRYVVIPQALKNIWPALGNEFITLLKDSSLVSVIGVTELMYQTELIQTSTYRGVLP 461

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + I M IY  ++  +   +N    ++ 
Sbjct: 462 LFIAMIIYFIMTFTLTRLLNYFERRMK 488



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   I+G L+   RLS NKL+  I   Y+E  R  P +V 
Sbjct: 284 YAPYFVKGIGYTIVITIFSVLIGIILGMLLALMRLSKNKLLHGIAVCYIEFIRGTPQMVQ 343

Query: 145 IFFLYKSV 152
           I F+Y  V
Sbjct: 344 ILFVYFGV 351


>gi|57867284|ref|YP_188964.1| amino acid ABC transporter, permease/amino acid-binding protein,
           putative [Staphylococcus epidermidis RP62A]
 gi|251811199|ref|ZP_04825672.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875757|ref|ZP_06284624.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|57637942|gb|AAW54730.1| amino acid ABC transporter, permease/amino acid-binding protein,
           putative [Staphylococcus epidermidis RP62A]
 gi|251805280|gb|EES57937.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294782|gb|EFA87309.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|329734283|gb|EGG70598.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU045]
 gi|329737224|gb|EGG73478.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU028]
          Length = 485

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 20/273 (7%)

Query: 130 RVYVEVFRNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           +  + V +N P L+      +     K+++          +   G F++  G  F     
Sbjct: 227 QTCIAVPKNSPVLLDKLNQTIDNVKEKNLIDQYMTKAAEDMQDDGNFISKYGSFFIKGIK 286

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +T     V   VLG +L  F   L +    +  + +  +YI    + G P LV + + + 
Sbjct: 287 NTILISLV-GVVLGSILGSFI-ALLKISKIRPLQWIASIYIEF--LRGTPMLVQVFIVFF 342

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L               +   IAL   ++A+IAEI+R+G+ AV +GQ EAA +L
Sbjct: 343 GTTAALGLD----------ISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSL 392

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +R+  + V++PQA++ I+P L ++++ L+K SS+   +G ++++     +   +   
Sbjct: 393 GLNYRQTMQSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDP 452

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+   +Y  L+  +   MN +  +++  +
Sbjct: 453 FTPLLVAALLYFLLTFALTRVMNFIEGRMSASD 485



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 38/73 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  + G  NT  ++  G++  +I+G+ +   ++S  + + WI  +Y+E  R  P L
Sbjct: 275 SKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRPLQWIASIYIEFLRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++    + 
Sbjct: 335 VQVFIVFFGTTAA 347


>gi|325685987|gb|EGD28048.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 500

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + S  +G+VL +    L R    K   A+ + YI    + G P +V I   Y    
Sbjct: 302 MIITICSITIGLVLGVI-FALMRLSKNKLLHAIAVCYIEF--LRGTPQMVQIMFVY---- 354

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F         P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 355 -------FGVGMLIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLS 407

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R V+ PQA+++I P L ++++ L K+SSL   +G  +L+   G +   T + +  
Sbjct: 408 QAKTYRYVVFPQALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMP 467

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + I M IY  ++ ++   +N    ++ L   +
Sbjct: 468 LFITMCIYFVVTFILTRLLNYFERRMNLTSSR 499



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 33/79 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S YA     G   T  +    +    ++G +    RLS NKL+  I   Y+E  R  P +
Sbjct: 288 SKYAGYFATGLGYTMIITICSITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQM 347

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           V I F+Y  V  ++     
Sbjct: 348 VQIMFVYFGVGMLIKNMPA 366


>gi|313123999|ref|YP_004034258.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312280562|gb|ADQ61281.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 500

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + S  +G+VL +    L R    K   A+ + YI    + G P +V I   Y    
Sbjct: 302 MIITICSITIGLVLGVI-FALMRLSKNKLLHAIAVCYIEF--LRGTPQMVQIMFVY---- 354

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F         P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 355 -------FGVGMLIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLS 407

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R V+ PQA+++I P L ++++ L K+SSL   +G  +L+   G +   T + +  
Sbjct: 408 QAKTYRYVVFPQALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMP 467

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + I M IY  ++ ++   +N    ++ L   +
Sbjct: 468 LFITMCIYFVVTFILTRLLNYFERRMNLTSSR 499



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S YA+    G   T  +    +    ++G +    RLS NKL+  I   Y+E  R  P +
Sbjct: 288 SKYASYFATGLGYTMIITICSITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQM 347

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           V I F+Y  V  ++     
Sbjct: 348 VQIMFVYFGVGMLIKNMPA 366


>gi|258423136|ref|ZP_05686030.1| polar amino acid ABC transporter [Staphylococcus aureus A9635]
 gi|257846700|gb|EEV70720.1| polar amino acid ABC transporter [Staphylococcus aureus A9635]
          Length = 485

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPSLGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|148268330|ref|YP_001247273.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150394392|ref|YP_001317067.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|253315189|ref|ZP_04838402.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus str. CF-Marseille]
 gi|255006646|ref|ZP_05145247.2| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257793783|ref|ZP_05642762.1| polar amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|258413720|ref|ZP_05681993.1| polar amino acid ABC transporter [Staphylococcus aureus A9763]
 gi|258420773|ref|ZP_05683712.1| polar amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|258438434|ref|ZP_05689718.1| polar amino acid ABC transporter [Staphylococcus aureus A9299]
 gi|258443879|ref|ZP_05692218.1| polar amino acid ABC transporter [Staphylococcus aureus A8115]
 gi|258447334|ref|ZP_05695481.1| polar amino acid ABC transporter [Staphylococcus aureus A6300]
 gi|258448183|ref|ZP_05696310.1| polar amino acid ABC transporter [Staphylococcus aureus A6224]
 gi|258453384|ref|ZP_05701367.1| polar amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|269203495|ref|YP_003282764.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282895157|ref|ZP_06303376.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A8117]
 gi|282928597|ref|ZP_06336196.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A10102]
 gi|295406165|ref|ZP_06815973.1| polar amino acid ABC transporter [Staphylococcus aureus A8819]
 gi|297244912|ref|ZP_06928789.1| polar amino acid ABC transporter [Staphylococcus aureus A8796]
 gi|147741399|gb|ABQ49697.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149946844|gb|ABR52780.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|257787755|gb|EEV26095.1| polar amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|257839507|gb|EEV63978.1| polar amino acid ABC transporter [Staphylococcus aureus A9763]
 gi|257843377|gb|EEV67787.1| polar amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|257848478|gb|EEV72469.1| polar amino acid ABC transporter [Staphylococcus aureus A9299]
 gi|257851285|gb|EEV75228.1| polar amino acid ABC transporter [Staphylococcus aureus A8115]
 gi|257853921|gb|EEV76877.1| polar amino acid ABC transporter [Staphylococcus aureus A6300]
 gi|257858422|gb|EEV81298.1| polar amino acid ABC transporter [Staphylococcus aureus A6224]
 gi|257864476|gb|EEV87221.1| polar amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|262075785|gb|ACY11758.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282589806|gb|EFB94891.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A10102]
 gi|282762501|gb|EFC02642.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus A8117]
 gi|283471129|emb|CAQ50340.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus ST398]
 gi|294969162|gb|EFG45183.1| polar amino acid ABC transporter [Staphylococcus aureus A8819]
 gi|297177992|gb|EFH37240.1| polar amino acid ABC transporter [Staphylococcus aureus A8796]
 gi|315130497|gb|EFT86483.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|329732960|gb|EGG69304.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 485

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|329727185|gb|EGG63641.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21172]
          Length = 485

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|315657916|ref|ZP_07910790.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
 gi|315496952|gb|EFU85273.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus lugdunensis M23590]
          Length = 497

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 13/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +     ++G VL      L++    K    +   YI   +I G P LV + + +    
Sbjct: 301 IILSAIGVIIGAVLGTLI-ALAKLSKIKIISWIAAAYIE--IIRGTPLLVQVFIVFFGTT 357

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L              F+   IAL   ++A+IAEI+R+G+ AV +GQ EAA  LGL 
Sbjct: 358 AALGLD----------ISAFICGIIALIINSSAYIAEIIRAGINAVDKGQTEAAQCLGLN 407

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  + V++PQA+++I+P L ++++ L+K SS+   +G ++++     +   +      
Sbjct: 408 YNQTMKNVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVSEVMFNSQVVQGISFDPFTP 467

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L+   +Y  L+  ++  M  +  ++   +
Sbjct: 468 LLLAAGLYFVLTFSLSRIMTLIEGRMKASD 497



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 40/71 (56%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +  + G VNT  L+  G+I   ++GTL+   +LS  K+++WI   Y+E+ R  P LV 
Sbjct: 289 YGSFFVKGIVNTIILSAIGVIIGAVLGTLIALAKLSKIKIISWIAAAYIEIIRGTPLLVQ 348

Query: 145 IFFLYKSVLSV 155
           +F ++    + 
Sbjct: 349 VFIVFFGTTAA 359


>gi|223043619|ref|ZP_03613664.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14]
 gi|222443107|gb|EEE49207.1| glutamine-binding periplasmic protein [Staphylococcus capitis SK14]
          Length = 485

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 119/266 (44%), Gaps = 20/266 (7%)

Query: 137 RNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +N P L+      +     K+++          +   G F    G  F     +T     
Sbjct: 234 KNSPILLKHLNQTIDEVNNKNLIDKYMNQAAQDMQDDGNFFTKYGSFFIKGIKNTILISL 293

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   +LG +L  F   L +    K    L  +YI    + G P LV + + +        
Sbjct: 294 V-GVILGSILGAFI-ALLKINKFKPLSWLASIYIEF--LRGTPMLVQVFIVFFGTTAALG 349

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L               +   IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL + + 
Sbjct: 350 LD----------VSALICGTIALIINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYIQT 399

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + V++PQA+++I+P L ++++ L+K SS+   +G ++++     +   +      +++ 
Sbjct: 400 MKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDPFTPLIVA 459

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +Y  L+  ++  M+ +  ++   +
Sbjct: 460 AVLYFILTFALSRIMSLVEGRMKASD 485



 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 37/71 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +  + G  NT  ++  G+I  +I+G  +   +++  K ++W+  +Y+E  R  P LV 
Sbjct: 277 YGSFFIKGIKNTILISLVGVILGSILGAFIALLKINKFKPLSWLASIYIEFLRGTPMLVQ 336

Query: 145 IFFLYKSVLSV 155
           +F ++    + 
Sbjct: 337 VFIVFFGTTAA 347


>gi|329724901|gb|EGG61404.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU144]
          Length = 487

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/274 (22%), Positives = 125/274 (45%), Gaps = 20/274 (7%)

Query: 130 RVYVEVFRNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           +  + V +N P L+      +     K+++          +   G F++  G  F     
Sbjct: 227 QTCIAVPKNSPVLLDKLNQTIDNVKEKNLIDQYMTKAAEDMQDDGNFISKYGNFFIKGIK 286

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +T     V   VLG +L  F   L +    +  + +  +YI    + G P LV + + + 
Sbjct: 287 NTILISLV-GVVLGSILGSFI-ALLKISKIRPLQLIASIYIEF--LRGTPMLVQVFIVFF 342

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L               +   IAL   ++A+IAEI+R+G+ AV +GQ EAA +L
Sbjct: 343 GTTAALGLD----------ISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSL 392

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +R+  + V++PQA++ I+P L ++++ L+K SS+   +G ++++     +   +   
Sbjct: 393 GLNYRQTMQSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDP 452

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+   +Y  L+  +   MN +  +++  ++
Sbjct: 453 FTPLLVAALLYFLLTFALTRVMNFIEGRMSASDQ 486



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 36/73 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y    + G  NT  ++  G++  +I+G+ +   ++S  + +  I  +Y+E  R  P L
Sbjct: 275 SKYGNFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRPLQLIASIYIEFLRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++    + 
Sbjct: 335 VQVFIVFFGTTAA 347


>gi|27468459|ref|NP_765096.1| glutamine-binding periplasmic protein [Staphylococcus epidermidis
           ATCC 12228]
 gi|27316006|gb|AAO05140.1|AE016749_86 glutamine-binding periplasmic protein [Staphylococcus epidermidis
           ATCC 12228]
          Length = 485

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 20/273 (7%)

Query: 130 RVYVEVFRNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           +  + V +N P L+      +     K+++          +   G F++  G  F     
Sbjct: 227 QTCIAVPKNSPVLLDKLNQTIDNVKEKNLIDQYMTKAAEDMQDDGNFISKYGSFFIKGIK 286

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           +T     V   VLG +L  F   L +    +  + +  +YI    + G P LV + + + 
Sbjct: 287 NTILISLV-GVVLGSILGSFI-ALLKISKIRPLQWIASIYIEF--LRGTPMLVQVFIVFF 342

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L               +   IAL   ++A+IAEI+R+G+ AV +GQ EAA +L
Sbjct: 343 GTTAALGLD----------ISALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSL 392

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +R+  + V++PQA++ I+P L ++++ L+K SS+   +G ++++     +   +   
Sbjct: 393 GLNYRQTMQSVVMPQAIKKILPALGNEFVTLIKESSIVSTIGVSEIMFNAQVVQGISFDP 452

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+   +Y  L+  +   MN +  +++  +
Sbjct: 453 FTPLLVAALLYFLLTFALTRVMNFIEGRMSASD 485



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 38/73 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  + G  NT  ++  G++  +I+G+ +   ++S  + + WI  +Y+E  R  P L
Sbjct: 275 SKYGSFFIKGIKNTILISLVGVVLGSILGSFIALLKISKIRPLQWIASIYIEFLRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++    + 
Sbjct: 335 VQVFIVFFGTTAA 347


>gi|314934022|ref|ZP_07841387.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus caprae C87]
 gi|313654172|gb|EFS17929.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus caprae C87]
          Length = 485

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 20/266 (7%)

Query: 137 RNIPPLV------VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +N P L+      +     K+++          +   G F    G  F     +T     
Sbjct: 234 KNSPILLKHLNQTIDEVNNKNLIDKYMNQAAQDMQDDGNFFTKYGSFFIKGIKNTILISL 293

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   +LG +L  F   L +    K    L  +YI    + G P LV + + +        
Sbjct: 294 V-GVILGSILGAFI-ALLKINKFKPLSWLASIYIEF--LRGTPMLVQVFIVFFGTTAALG 349

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L               +   IAL   ++A+IAEI+R+G+ AV +GQMEAA +LGL + + 
Sbjct: 350 LD----------VSALICGTIALIINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYIQT 399

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + V++PQA+++I+P L ++++ L+K SS+   +G  +++     +   +      +++ 
Sbjct: 400 MKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVA 459

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +Y  L+  ++  M+ +  ++   +
Sbjct: 460 AVLYFILTFALSRIMSLVEGRMKASD 485



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 37/71 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +  + G  NT  ++  G+I  +I+G  +   +++  K ++W+  +Y+E  R  P LV 
Sbjct: 277 YGSFFIKGIKNTILISLVGVILGSILGAFIALLKINKFKPLSWLASIYIEFLRGTPMLVQ 336

Query: 145 IFFLYKSVLSV 155
           +F ++    + 
Sbjct: 337 VFIVFFGTTAA 347


>gi|296276990|ref|ZP_06859497.1| amino acid ABC transporter, permease [Staphylococcus aureus subsp.
           aureus MR1]
          Length = 485

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISTLVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|282917128|ref|ZP_06324886.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus D139]
 gi|282319615|gb|EFB49967.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus D139]
          Length = 485

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|49484100|ref|YP_041324.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257425970|ref|ZP_05602394.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|282904433|ref|ZP_06312321.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906256|ref|ZP_06314111.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282909175|ref|ZP_06316993.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282911481|ref|ZP_06319283.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282919619|ref|ZP_06327354.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C427]
 gi|283958611|ref|ZP_06376062.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295428436|ref|ZP_06821065.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|49242229|emb|CAG40936.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|257271664|gb|EEV03810.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|282317429|gb|EFB47803.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C427]
 gi|282325176|gb|EFB55486.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282327439|gb|EFB57734.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282331548|gb|EFB61062.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282596051|gb|EFC01015.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus C160]
 gi|283790760|gb|EFC29577.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|295127836|gb|EFG57473.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|312437677|gb|ADQ76748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315195770|gb|EFU26157.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus CGS00]
          Length = 485

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|301301393|ref|ZP_07207533.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300850998|gb|EFK78742.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 499

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             ++    ++    I V S ++G VL +    L R  H K    L + YI    I G P 
Sbjct: 293 YWTYFAKGIEYTLIITVVSVLIGFVLGIIL-ALMRLGHNKLLHGLAVAYIEF--IRGTPL 349

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   Y           F         P   +  IA+S  ++A++AE++RSG+ ++  
Sbjct: 350 MVQVMFVY-----------FGIGAVIQSLPALAAGIIAVSLNSSAYVAEVIRSGIESIAI 398

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++ ++  + V++PQA+++I P L ++++ L+K SS+   +G  DL+    
Sbjct: 399 GQTEAARSLGMSQKQTYQYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQ 458

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +N    K+ 
Sbjct: 459 LVQSATYKGVAPLAITMVIYFVLTFTLSKGLNYFEGKMK 497



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY T    G   T  +    ++   ++G ++   RL  NKL+  +   Y+E  R  P +V
Sbjct: 292 SYWTYFAKGIEYTLIITVVSVLIGFVLGIILALMRLGHNKLLHGLAVAYIEFIRGTPLMV 351

Query: 144 VIFFLYKSVLSV 155
            + F+Y  + +V
Sbjct: 352 QVMFVYFGIGAV 363


>gi|21283528|ref|NP_646616.1| hypothetical protein MW1799 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486677|ref|YP_043898.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57650648|ref|YP_186741.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87161641|ref|YP_494491.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88195682|ref|YP_500488.1| ABC transporter permease [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221962|ref|YP_001332784.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161510076|ref|YP_001575735.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221142158|ref|ZP_03566651.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253732516|ref|ZP_04866681.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|258452651|ref|ZP_05700650.1| amino acid ABC transporter [Staphylococcus aureus A5948]
 gi|282924191|ref|ZP_06331866.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9765]
 gi|284024905|ref|ZP_06379303.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus 132]
 gi|294850288|ref|ZP_06791023.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9754]
 gi|297207424|ref|ZP_06923861.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300911508|ref|ZP_07128953.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304380538|ref|ZP_07363213.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|21204969|dbj|BAB95664.1| MW1799 [Staphylococcus aureus subsp. aureus MW2]
 gi|49245120|emb|CAG43586.1| putative extracellular glutamine-binding protein [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57284834|gb|AAW36928.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus COL]
 gi|87127615|gb|ABD22129.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87203240|gb|ABD31050.1| ABC transporter, permease protein, putative [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150374762|dbj|BAF68022.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160368885|gb|ABX29856.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723797|gb|EES92526.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257859626|gb|EEV82475.1| amino acid ABC transporter [Staphylococcus aureus A5948]
 gi|269941329|emb|CBI49726.1| putative extracellular glutamine-bindingprotein [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282592986|gb|EFB97988.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9765]
 gi|294822904|gb|EFG39338.1| extracellular glutamine-binding protein [Staphylococcus aureus
           A9754]
 gi|296887887|gb|EFH26783.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300887140|gb|EFK82340.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302751667|gb|ADL65844.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340867|gb|EFM06792.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|315196792|gb|EFU27136.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141291|gb|EFW33136.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|329314534|gb|AEB88947.1| Polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329729517|gb|EGG65919.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21189]
          Length = 485

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +++   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|298695127|gb|ADI98349.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 485

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|90962512|ref|YP_536428.1| amino acid ABC transporter [Lactobacillus salivarius UCC118]
 gi|90821706|gb|ABE00345.1| Amino acid ABC transporter [Lactobacillus salivarius UCC118]
          Length = 499

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             ++    ++    I V S ++G VL +    L R  H K    L + YI    I G P 
Sbjct: 293 YWTYFAKGIEYTLIITVVSVLIGFVLGIIL-ALMRLGHNKLLHGLAVAYIEF--IRGTPL 349

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   Y           F         P   +  IA+S  + A++AE++RSG+ ++  
Sbjct: 350 MVQVMFVY-----------FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAI 398

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++ ++  + V++PQA+++I P L ++++ L+K SS+   +G  DL+    
Sbjct: 399 GQTEAARSLGMSQKQTYQYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQ 458

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +N    K+ 
Sbjct: 459 LVQSATYKGVAPLAITMVIYFVLTFTLSKGLNYFEGKMK 497



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY T    G   T  +    ++   ++G ++   RL  NKL+  +   Y+E  R  P +V
Sbjct: 292 SYWTYFAKGIEYTLIITVVSVLIGFVLGIILALMRLGHNKLLHGLAVAYIEFIRGTPLMV 351

Query: 144 VIFFLYKSVLSV 155
            + F+Y  + +V
Sbjct: 352 QVMFVYFGIGAV 363


>gi|297590597|ref|ZP_06949235.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|297575483|gb|EFH94199.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           MN8]
          Length = 485

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|227891436|ref|ZP_04009241.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|227866583|gb|EEJ74004.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
          Length = 501

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             ++    ++    I V S ++G VL +    L R  H K    L + YI    I G P 
Sbjct: 295 YWTYFAKGIEYTLIITVVSVLIGFVLGIIL-ALMRLGHNKLLHGLAVAYIEF--IRGTPL 351

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   Y           F         P   +  IA+S  + A++AE++RSG+ ++  
Sbjct: 352 MVQVMFVY-----------FGIGAVIQSLPALAAGIIAVSLNSGAYVAEVIRSGIESIAI 400

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++ ++  + V++PQA+++I P L ++++ L+K SS+   +G  DL+    
Sbjct: 401 GQTEAARSLGMSQKQTYQYVVIPQAIKNIWPALGNEFITLIKESSIVSVIGVGDLMYQTQ 460

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +N    K+ 
Sbjct: 461 LVQSATYKGVAPLAITMVIYFVLTFTLSKGLNYFEGKMK 499



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY T    G   T  +    ++   ++G ++   RL  NKL+  +   Y+E  R  P +V
Sbjct: 294 SYWTYFAKGIEYTLIITVVSVLIGFVLGIILALMRLGHNKLLHGLAVAYIEFIRGTPLMV 353

Query: 144 VIFFLYKSVLSV 155
            + F+Y  + +V
Sbjct: 354 QVMFVYFGIGAV 365


>gi|253735261|ref|ZP_04869426.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253726668|gb|EES95397.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 485

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +++   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLIVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|104774186|ref|YP_619166.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103423267|emb|CAI98100.1| Amino Acid ABC transporter, substrate binding /permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 493

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + S  +G+VL +    L R    K   A+ + YI    + G P +V I   Y    
Sbjct: 295 MIITICSITIGLVLGVI-FALMRLSKNKLLHAIAVCYIEF--LRGTPQMVQIMFVY---- 347

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F         P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 348 -------FGVGMLIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLS 400

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R V+ PQA+++I P L ++++ L K+SSL   +G  +L+   G +   T + +  
Sbjct: 401 QAKTYRYVVFPQALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMP 460

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + I M IY  ++ +    +N    ++ L   +
Sbjct: 461 LFITMCIYFVVTFIFTRLLNYFERRMNLTSSR 492



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S YA+    G   T  +    +    ++G +    RLS NKL+  I   Y+E  R  P +
Sbjct: 281 SKYASYFATGLGYTMIITICSITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQM 340

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           V I F+Y  V  ++     
Sbjct: 341 VQIMFVYFGVGMLIKNMPA 359


>gi|82751513|ref|YP_417254.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           RF122]
 gi|82657044|emb|CAI81481.1| substrate-binding glutamine ABC transporter [Staphylococcus aureus
           RF122]
          Length = 485

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|257428635|ref|ZP_05605033.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257431272|ref|ZP_05607649.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433952|ref|ZP_05610310.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257436868|ref|ZP_05612912.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus M876]
 gi|282914654|ref|ZP_06322440.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|282924999|ref|ZP_06332665.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C101]
 gi|293503725|ref|ZP_06667572.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293510746|ref|ZP_06669451.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus M809]
 gi|293537288|ref|ZP_06671968.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|257275476|gb|EEV06963.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257278220|gb|EEV08868.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257282045|gb|EEV12182.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284219|gb|EEV14342.1| polar amino acid ABC transporter [Staphylococcus aureus subsp.
           aureus M876]
 gi|282313365|gb|EFB43761.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus C101]
 gi|282321835|gb|EFB52160.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M899]
 gi|290920133|gb|EFD97201.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291095391|gb|EFE25656.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291466637|gb|EFF09158.1| extracellular glutamine-binding protein [Staphylococcus aureus
           subsp. aureus M809]
          Length = 485

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + + +  +       ++  SF    +     I +    LG +L  F   L +    K   
Sbjct: 260 MTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFV-ALMKLSKIKIIS 318

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +YI   ++ G P LV + + +        L               +   IAL   +
Sbjct: 319 WIASIYIE--ILRGTPMLVQVFIVFFGITAALGLD----------ISALVCGTIALVINS 366

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEI+R+G+ AV +GQMEAA +LGL +R+  + V++PQA+++I+P L ++++ L+K 
Sbjct: 367 SAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKE 426

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS+   +G  +++     +   +      +L+   +Y  L+ ++   MN +  ++   +
Sbjct: 427 SSIVSTIGVGEIMFNAQVVQGISFDPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD 485



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 39/73 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y +  L G   T  ++  G+   +I+G  V   +LS  K+++WI  +Y+E+ R  P L
Sbjct: 275 SKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML 334

Query: 143 VVIFFLYKSVLSV 155
           V +F ++  + + 
Sbjct: 335 VQVFIVFFGITAA 347


>gi|314936089|ref|ZP_07843436.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis subsp. hominis C80]
 gi|313654708|gb|EFS18453.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis subsp. hominis C80]
          Length = 484

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 20/266 (7%)

Query: 137 RNIPPLVVIF------FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +N P L+            + ++S         +     F +  G  F     +T     
Sbjct: 233 KNSPILLANVNKSIKEVNDQHLISKYMDKASKDMQDDSSFFDKYGAFFIKGLKNTILISM 292

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   VLG VL      L++    K    +  +YI    + G P LV + L +   F    
Sbjct: 293 I-GVVLGAVLG-ALIALAKLSKFKLLSWIASIYIEF--LRGTPMLVQVFLVF---FGTTA 345

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +   +           +   IAL   ++A+IAEI R+G+ AV +GQ EAA  LGL + K 
Sbjct: 346 VLGLDV-------SALVCGTIALVINSSAYIAEIFRAGINAVDKGQTEAAQCLGLNYSKT 398

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA+++I+P L ++++ L+K SS+   +G  +++     +   +      ++I 
Sbjct: 399 MRYIILPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIIA 458

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +Y  L+  ++  M+ +  ++   +
Sbjct: 459 AIMYFILTFTLSRGMSLIEGRMKASD 484



 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 38/73 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    + G  NT  ++  G++   ++G L+   +LS  KL++WI  +Y+E  R  P L
Sbjct: 274 DKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSWIASIYIEFLRGTPML 333

Query: 143 VVIFFLYKSVLSV 155
           V +F ++    +V
Sbjct: 334 VQVFLVFFGTTAV 346


>gi|289550425|ref|YP_003471329.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus lugdunensis HKU09-01]
 gi|289179957|gb|ADC87202.1| Glutamate ABC transporter, periplasmic glutamine-binding protein
           [Staphylococcus lugdunensis HKU09-01]
          Length = 485

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 13/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +     ++G VL      L++    K    +   YI   +I G P LV + + +    
Sbjct: 289 IILSAIGVIIGAVLGTLI-ALAKLSKIKIISWIAAAYIE--IIRGTPLLVQVFIVFFGTT 345

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L              F+   IAL   ++A+IAEI+R+G+ AV +GQ EAA  LGL 
Sbjct: 346 AALGLD----------ISAFICGIIALIINSSAYIAEIIRAGINAVDKGQTEAAQCLGLN 395

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  + V++PQA+++I+P L ++++ L+K SS+   +G ++++     +   +      
Sbjct: 396 YNQTMKNVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVSEVMFNSQVVQGISFDPFTP 455

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L+   +Y  L+  ++  M  +  ++   +
Sbjct: 456 LLLAAGLYFVLTFSLSRIMTLIEGRMKASD 485



 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 40/71 (56%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +  + G VNT  L+  G+I   ++GTL+   +LS  K+++WI   Y+E+ R  P LV 
Sbjct: 277 YGSFFVKGIVNTIILSAIGVIIGAVLGTLIALAKLSKIKIISWIAAAYIEIIRGTPLLVQ 336

Query: 145 IFFLYKSVLSV 155
           +F ++    + 
Sbjct: 337 VFIVFFGTTAA 347


>gi|116514276|ref|YP_813182.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093591|gb|ABJ58744.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 500

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + S  +G+VL +    L R    K   A+ + YI    + G P +V I   Y    
Sbjct: 302 MIITICSITIGLVLGVI-FALMRLSKNKLLHAIAVCYIEF--LRGTPQMVQIMFVY---- 354

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F         P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 355 -------FGVGMLIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLS 407

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R V+ PQA+++I P L ++++ L K+SSL   +G  +L+   G +   T + +  
Sbjct: 408 QTKTYRYVVFPQALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMP 467

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + I M IY  ++ +    +N    ++ L   +
Sbjct: 468 LFITMCIYFVVTFIFTRLLNYFERRMNLTSSR 499



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S YA+    G   T  +    +    ++G +    RLS NKL+  I   Y+E  R  P +
Sbjct: 288 SKYASYFATGLGYTMIITICSITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQM 347

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           V I F+Y  V  ++     
Sbjct: 348 VQIMFVYFGVGMLIKNMPA 366


>gi|282851008|ref|ZP_06260382.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311111018|ref|ZP_07712415.1| amino acid ABC transporter, permease/substrate-binding protein
           [Lactobacillus gasseri MV-22]
 gi|282557960|gb|EFB63548.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311066172|gb|EFQ46512.1| amino acid ABC transporter, permease/substrate-binding protein
           [Lactobacillus gasseri MV-22]
          Length = 498

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            + +    +     I VFS ++  ++      L R         L + YI    I G P 
Sbjct: 288 YIPYFFKGIWYTIVITVFSVII-GIVLGIILALMRLSKNPILHWLAVCYIEF--IRGTPQ 344

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F      +     ++  IA+   + A++AE +RSG+ ++P+
Sbjct: 345 MVQILFVY-----------FGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPK 393

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL+ +KA R V++PQA+++I P L ++++ LLK+SSL   +G A+L+    
Sbjct: 394 GQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQ 453

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   T + +  + I M IY  ++  +   +N    ++   +
Sbjct: 454 LVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEKRMKRND 495



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  +    +I   ++G ++   RLS N ++ W+   Y+E  R  P +V 
Sbjct: 288 YIPYFFKGIWYTIVITVFSVIIGIVLGIILALMRLSKNPILHWLAVCYIEFIRGTPQMVQ 347

Query: 145 IFFLYKSV 152
           I F+Y  +
Sbjct: 348 ILFVYFGI 355


>gi|325125966|gb|ADY85296.1| Glutamine ABC transporter permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 493

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + S  +G+VL +    L R    K   A+ + YI    + G P +V I   Y    
Sbjct: 295 MIITICSITIGLVLGVI-FALMRLSKNKLLHAIAVCYIEF--LRGTPQMVQIMFVY---- 347

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F         P   +  IA+   + A++AE +RSG+ +V +GQ EAA +LGL+
Sbjct: 348 -------FGVGMLIKNMPALAAGIIAIGLNSGAYVAEDIRSGINSVAKGQTEAARSLGLS 400

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R V+ PQA+++I P L ++++ L K+SSL   +G  +L+   G +   T + +  
Sbjct: 401 QAKTYRYVVFPQALKNIWPALGNEFITLTKDSSLVSVIGVGELMYETGLVQTATYRGVMP 460

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + I M IY  ++ +    +N    ++ L   +
Sbjct: 461 LFITMCIYFVVTFIFTRLLNYFERRMNLTSSR 492



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S YA+    G   T  +    +    ++G +    RLS NKL+  I   Y+E  R  P +
Sbjct: 281 SKYASYFATGLGYTMIITICSITIGLVLGVIFALMRLSKNKLLHAIAVCYIEFLRGTPQM 340

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           V I F+Y  V  ++     
Sbjct: 341 VQIMFVYFGVGMLIKNMPA 359


>gi|300768251|ref|ZP_07078156.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|300494315|gb|EFK29478.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
          Length = 491

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 15/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                  +    T+        F F++GI+L+L              + L   Y+    I
Sbjct: 281 HYWKAFATGIEYTLIITVCSVFFGFIIGILLALARMAKGNPLKTAI-RWLATAYVEF--I 337

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V +   Y              +G     P   S  IA+S  + A++AE +R G+
Sbjct: 338 RGTPMMVQVMFVY------------FGLGLFVNLPALTSGIIAISLNSGAYVAEYIRGGI 385

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQ EAA +LG+++ +  R V+LPQA+++I P L ++++ L+K+SS+   +G  +L
Sbjct: 386 NSVDVGQTEAARSLGMSNGETMRYVVLPQALKNIWPSLGNEFITLIKDSSIVSIIGVTEL 445

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +     + + T + +  I++ M +Y  L+   +  +N    ++
Sbjct: 446 IYQSNIVRSDTYRGVAPIVVIMVLYFILTFTASRILNYFERRM 488



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----NKLVAWICRVYVEVFRNIP 140
           Y  A   G   T  +    +    IIG L+   R++        + W+   YVE  R  P
Sbjct: 282 YWKAFATGIEYTLIITVCSVFFGFIIGILLALARMAKGNPLKTAIRWLATAYVEFIRGTP 341

Query: 141 PLVVIFFLYKSVLSVLPIP 159
            +V + F+Y  +   + +P
Sbjct: 342 MMVQVMFVYFGLGLFVNLP 360


>gi|116629207|ref|YP_814379.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri ATCC 33323]
 gi|116094789|gb|ABJ59941.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus gasseri ATCC 33323]
          Length = 501

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            + +    +     I VFS ++  ++      L R         L + YI    I G P 
Sbjct: 291 YIPYFFKGIWYTIVITVFSVII-GIVLGIILALMRLSKNPILHWLAVCYIEF--IRGTPQ 347

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F      +     ++  IA+   + A++AE +RSG+ ++P+
Sbjct: 348 MVQILFVY-----------FGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPK 396

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL+ +KA R V++PQA+++I P L ++++ LLK+SSL   +G A+L+    
Sbjct: 397 GQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQ 456

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   T + +  + I M IY  ++  +   +N    ++   +
Sbjct: 457 LVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEKRMKRND 498



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  +    +I   ++G ++   RLS N ++ W+   Y+E  R  P +V 
Sbjct: 291 YIPYFFKGIWYTIVITVFSVIIGIVLGIILALMRLSKNPILHWLAVCYIEFIRGTPQMVQ 350

Query: 145 IFFLYKSV 152
           I F+Y  +
Sbjct: 351 ILFVYFGI 358


>gi|314939959|ref|ZP_07847159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314942568|ref|ZP_07849402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314947466|ref|ZP_07850881.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314952490|ref|ZP_07855491.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314992413|ref|ZP_07857839.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996253|ref|ZP_07861312.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313589575|gb|EFR68420.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593048|gb|EFR71893.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313595396|gb|EFR74241.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313598672|gb|EFR77517.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640793|gb|EFS05373.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313646016|gb|EFS10596.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 487

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 283 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTIASIYVD--IIRG 335

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 336 IPMMV---LAFFIFFGLPGIVGFTI-------PDFLAGVITLTLNASAYIAEIVRGGINA 385

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 386 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 445

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 446 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 487



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  I  +YV++ R IP +
Sbjct: 280 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMM 339

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 340 VLAFFIFFGLP 350


>gi|331266285|ref|YP_004325915.1| polar amino acid ABC transporter, amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
 gi|326682957|emb|CBZ00574.1| polar amino acid ABC transporter, amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
          Length = 721

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASETSTDSTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRLISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|238853899|ref|ZP_04644262.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|238833485|gb|EEQ25759.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
          Length = 498

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            + +    +     I VFS ++  ++      L R         L + YI    I G P 
Sbjct: 288 YIPYFFKGIWYTIVITVFSVII-GIVLGIILALMRLSKNPILHWLAVCYIEF--IRGTPQ 344

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F      +     ++  IA+   + A++AE +RSG+ ++P+
Sbjct: 345 MVQILFVY-----------FGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPK 393

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL+ +KA R V++PQA+++I P L ++++ LLK+SSL   +G A+L+    
Sbjct: 394 GQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQ 453

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   T + +  + I M IY  ++  +   +N    ++   +
Sbjct: 454 LVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEKRMKRND 495



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  +    +I   ++G ++   RLS N ++ W+   Y+E  R  P +V 
Sbjct: 288 YIPYFFKGIWYTIVITVFSVIIGIVLGIILALMRLSKNPILHWLAVCYIEFIRGTPQMVQ 347

Query: 145 IFFLYKSV 152
           I F+Y  +
Sbjct: 348 ILFVYFGI 355


>gi|242374107|ref|ZP_04819681.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
 gi|242348232|gb|EES39834.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis M23864:W1]
          Length = 375

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 57/247 (23%), Positives = 110/247 (44%), Gaps = 14/247 (5%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
           K+++          +   G F    G  F     DT     +   +LG +L      L +
Sbjct: 143 KNLIDSYMNKAAEDMQDDGNFFTKYGSFFIKGIKDTILISSI-GVILGSILG-ALIALMK 200

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               K    L  +YI    + G P LV + + +        L               +  
Sbjct: 201 LSKFKPLSWLASIYIEF--LRGTPMLVQVFIVFFGTTAALGLD----------VSALICG 248

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL   ++A+IAEI+R+G+ AV +GQ EAA +LGL + +  + V++PQA+++I+P L +
Sbjct: 249 TIALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYSQTMKFVVMPQAIKNILPALGN 308

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ L+K SS+   +G  +++     +   +      +LI   +Y  L+  ++  M+ + 
Sbjct: 309 EFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLIAAVLYFILTFALSRIMSLVE 368

Query: 390 AKIALKE 396
            ++   +
Sbjct: 369 GRMKASD 375



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 38/71 (53%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +  + G  +T  ++  G+I  +I+G L+   +LS  K ++W+  +Y+E  R  P LV 
Sbjct: 167 YGSFFIKGIKDTILISSIGVILGSILGALIALMKLSKFKPLSWLASIYIEFLRGTPMLVQ 226

Query: 145 IFFLYKSVLSV 155
           +F ++    + 
Sbjct: 227 VFIVFFGTTAA 237


>gi|306829599|ref|ZP_07462789.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus mitis
           ATCC 6249]
 gi|304428685|gb|EFM31775.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus mitis
           ATCC 6249]
          Length = 721

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASETSTDSTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRLISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|293365541|ref|ZP_06612250.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307703498|ref|ZP_07640440.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|291315909|gb|EFE56353.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307622905|gb|EFO01900.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 721

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     S          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSSDSTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRLISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|227544923|ref|ZP_03974972.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300910049|ref|ZP_07127509.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|227185090|gb|EEI65161.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300892697|gb|EFK86057.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 503

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +    +     I V S + G +L      L R    K   ++ + YI    + G P 
Sbjct: 296 YWRYFAKGIKYTLIITVVSVIFGFLLGTL-FALMRLSKNKFLHSIAVCYIEF--LRGTPM 352

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F         P  ++  IA+S  + A++AEI+RSG+ ++P 
Sbjct: 353 MVQIMFVY-----------FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPL 401

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++  +  R V++PQA+++I P L ++ + LLK+SSL   +G ++L+    
Sbjct: 402 GQTEAARSLGMSKSETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQ 461

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +     ++ 
Sbjct: 462 LVQSATYKGVLPLFITMIIYFILTFTLSRILLYFEGRMK 500



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 31/69 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY      G   T  +    +I   ++GTL    RLS NK +  I   Y+E  R  P +V
Sbjct: 295 SYWRYFAKGIKYTLIITVVSVIFGFLLGTLFALMRLSKNKFLHSIAVCYIEFLRGTPMMV 354

Query: 144 VIFFLYKSV 152
            I F+Y  +
Sbjct: 355 QIMFVYFGI 363


>gi|228475903|ref|ZP_04060613.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis SK119]
 gi|228270058|gb|EEK11528.1| amino acid ABC transporter, permease/substrate-binding protein
           [Staphylococcus hominis SK119]
          Length = 484

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 116/266 (43%), Gaps = 20/266 (7%)

Query: 137 RNIPPLVVIF------FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +N P L+            + ++S         +     F +  G  F     +T     
Sbjct: 233 KNSPILLANVNKSIKEVNDQHLISKYMDKASKDMQDDSSFFDKYGAFFIKGLKNTILISM 292

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   VLG VL      L++    K    +  +YI    + G P LV + L +   F    
Sbjct: 293 I-GVVLGAVLG-ALIALAKLSKFKLLSWIASIYIEF--LRGTPMLVQVFLVF---FGTTA 345

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +   +           +   IAL   ++A+IAEI R+G+ AV +GQ EAA  LGL + K 
Sbjct: 346 VLGLDV-------SALVCGTIALVINSSAYIAEIFRAGINAVDKGQTEAAQCLGLNYSKT 398

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQA+++I+P L ++++ L+K SS+   +G  +++     +   +      ++I 
Sbjct: 399 MRYIILPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLIIA 458

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             +Y  L+  ++  M+ +  ++   +
Sbjct: 459 AIMYFILTFTLSRGMSLIEGRMKASD 484



 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 38/73 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    + G  NT  ++  G++   ++G L+   +LS  KL++WI  +Y+E  R  P L
Sbjct: 274 DKYGAFFIKGLKNTILISMIGVVLGAVLGALIALAKLSKFKLLSWIASIYIEFLRGTPML 333

Query: 143 VVIFFLYKSVLSV 155
           V +F ++    +V
Sbjct: 334 VQVFLVFFGTTAV 346


>gi|148989263|ref|ZP_01820643.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|147925241|gb|EDK76320.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
          Length = 721

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 124/252 (49%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I+
Sbjct: 710 TRLAKRLEKRIS 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|315613252|ref|ZP_07888162.1| glutamine ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus sanguinis ATCC
           49296]
 gi|315314814|gb|EFU62856.1| glutamine ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein [Streptococcus sanguinis ATCC
           49296]
          Length = 721

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASETSTDSTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRLISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|168491161|ref|ZP_02715304.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
 gi|183574490|gb|EDT95018.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
          Length = 721

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|194398103|ref|YP_002037841.1| ABC transporter amino acid-binding protein/permease [Streptococcus
           pneumoniae G54]
 gi|194357770|gb|ACF56218.1| ABC transporter, amino acid-binding protein/permease protein
           [Streptococcus pneumoniae G54]
          Length = 721

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|145223751|ref|YP_001134429.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|315444078|ref|YP_004076957.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|145216237|gb|ABP45641.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium gilvum PYR-GCK]
 gi|315262381|gb|ADT99122.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 493

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 17/222 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L+   +T+        F+ +LG++  L     +R       +A+   ++  F   
Sbjct: 287 TSPMLLAGLKMTIILTVVSIFFALILGVIFGL-----ARVSRSIWLRAIGTTFVDIF--R 339

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV     + ++F  P    F             +  I LS    A++ EIVR G++
Sbjct: 340 GTPLLVQ---AFFIYFGIPATMGF-------QMSAVTAGIITLSLNAGAYMTEIVRGGIL 389

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEAA +LG+ +    R V+LPQA+R++IP   +Q++  LK++S+   +G A+L 
Sbjct: 390 SVDKGQMEAARSLGIGYLPTMRKVILPQAIRTMIPSYINQFVITLKDTSILSVLGIAELT 449

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  II    +A E+ LI   IY  + + +    +RL  ++
Sbjct: 450 QSGRIIIAGNYKAFEMWLIVGVIYFIVIMALTKLSDRLERRL 491



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L    +  A I+G + G  R+S +  +  I   +V++FR  P LV  FF+
Sbjct: 291 LLAGLKMTIILTVVSIFFALILGVIFGLARVSRSIWLRAIGTTFVDIFRGTPLLVQAFFI 350

Query: 149 YKSVLSVLPI 158
           Y  + + +  
Sbjct: 351 YFGIPATMGF 360


>gi|293568103|ref|ZP_06679440.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1071]
 gi|294617429|ref|ZP_06697063.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1679]
 gi|291589185|gb|EFF20996.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1071]
 gi|291596335|gb|EFF27594.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1679]
          Length = 500

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 296 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTIASIYVD--IIRG 348

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 349 IPMMV---LAFFIFFGLPGIVGFTI-------PDFLAGVITLTLNASAYIAEIVRGGINA 398

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 399 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 458

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 459 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 500



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  I  +YV++ R IP +
Sbjct: 293 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMM 352

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 353 VLAFFIFFGLP 363


>gi|69248956|ref|ZP_00604829.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|258615978|ref|ZP_05713748.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium DO]
 gi|293557298|ref|ZP_06675844.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1039]
 gi|293560170|ref|ZP_06676672.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1162]
 gi|294616498|ref|ZP_06696279.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1636]
 gi|294621567|ref|ZP_06700733.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium U0317]
 gi|68194329|gb|EAN08842.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|291590646|gb|EFF22374.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1636]
 gi|291598872|gb|EFF29923.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium U0317]
 gi|291600550|gb|EFF30856.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1039]
 gi|291605842|gb|EFF35274.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E1162]
          Length = 500

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 296 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTIASIYVD--IIRG 348

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 349 IPMMV---LAFFIFFGLPGIVGFTI-------PDFLAGVITLTLNASAYIAEIVRGGINA 398

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 399 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 458

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 459 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 500



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  I  +YV++ R IP +
Sbjct: 293 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMM 352

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 353 VLAFFIFFGLP 363


>gi|15901102|ref|NP_345706.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|111658436|ref|ZP_01409115.1| hypothetical protein SpneT_02000407 [Streptococcus pneumoniae
           TIGR4]
 gi|116516932|ref|YP_816569.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|149007101|ref|ZP_01830770.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|149012291|ref|ZP_01833360.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|168493162|ref|ZP_02717305.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|225856907|ref|YP_002738418.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|225859035|ref|YP_002740545.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|237649941|ref|ZP_04524193.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974]
 gi|307127172|ref|YP_003879203.1| amino acid ABC transporter amino acid-binding protein/permeae
           [Streptococcus pneumoniae 670-6B]
 gi|14972722|gb|AAK75346.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116077508|gb|ABJ55228.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|147761405|gb|EDK68371.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|147763617|gb|EDK70552.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|183576805|gb|EDT97333.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|225721475|gb|ACO17329.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|225725249|gb|ACO21101.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|306484234|gb|ADM91103.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 670-6B]
 gi|332074571|gb|EGI85045.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 721

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|182684032|ref|YP_001835779.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|303254264|ref|ZP_07340373.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|303258876|ref|ZP_07344855.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|303261559|ref|ZP_07347506.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|303264230|ref|ZP_07350150.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|303266139|ref|ZP_07352032.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|303268134|ref|ZP_07353934.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|182629366|gb|ACB90314.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|301801904|emb|CBW34628.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           INV200]
 gi|302598758|gb|EFL65795.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|302637139|gb|EFL67627.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|302639819|gb|EFL70275.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|302642351|gb|EFL72698.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|302644309|gb|EFL74563.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|302646042|gb|EFL76269.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
          Length = 721

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|261317401|ref|ZP_05956598.1| amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261296624|gb|EEY00121.1| amino acid ABC transporter [Brucella pinnipedialis B2/94]
          Length = 251

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 84/190 (44%), Positives = 111/190 (58%), Gaps = 8/190 (4%)

Query: 2   IKNARKTVTRYFSR--------MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNME 53
            +  RK +  YF             LYD R   I  Q+++   +     W V N   N++
Sbjct: 51  AERHRKHMASYFGTERRQGSGGTSLLYDPRARGIFYQVVVFGAVIAGIYWIVGNTITNLQ 110

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL 113
           ++N++ G GFL  RAGF+I Q ++ Y SDS+Y  A LVG VNT ++A  G++ A+IIG L
Sbjct: 111 RANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFLVGLVNTLYVAALGVVTASIIGFL 170

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VG GRLS N L+  IC VYVEVFRNIPPL+VIFF Y  VLSVLP    S  +P   ++NN
Sbjct: 171 VGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYFGVLSVLPPVRQSYSMPLSTYINN 230

Query: 174 RGLSFPTLTM 183
           RG   P+   
Sbjct: 231 RGFFMPSPVW 240


>gi|300362096|ref|ZP_07058273.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300354715|gb|EFJ70586.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 544

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            + +    +     I VFS ++  ++      L R         L + YI    I G P 
Sbjct: 334 YIPYFFKGIWYTIVITVFSVII-GIVLGIILALMRLSKNPILHWLAVCYIEF--IRGTPQ 390

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F      +     ++  IA+   + A++AE +RSG+ ++P+
Sbjct: 391 MVQILFVY-----------FGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPK 439

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL+ +KA R V++PQA+++I P L ++++ LLK+SSL   +G A+L+    
Sbjct: 440 GQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQ 499

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   T + +  + I M IY  ++  +   +N    ++   +
Sbjct: 500 LVQTSTYKGVLPLFIAMIIYFVMTFSLTRLLNHFEKRMKRND 541



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  +    +I   ++G ++   RLS N ++ W+   Y+E  R  P +V 
Sbjct: 334 YIPYFFKGIWYTIVITVFSVIIGIVLGIILALMRLSKNPILHWLAVCYIEFIRGTPQMVQ 393

Query: 145 IFFLYKSV 152
           I F+Y  +
Sbjct: 394 ILFVYFGI 401


>gi|315641120|ref|ZP_07896199.1| glutamine ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus italicus DSM
           15952]
 gi|315483128|gb|EFU73645.1| glutamine ABC superfamily ATP binding cassette transporter,
           binding/permease protein [Enterococcus italicus DSM
           15952]
          Length = 722

 Score =  182 bits (462), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 111/222 (50%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L+    TM      F  + V+G++  L +         K  + +  +Y+   +I G
Sbjct: 518 YQQLLAGLGKTMVLALVSFALALVVGVIFGLMSVA-----PIKAVRIVASIYVD--IIRG 570

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +VL    +            +   G T+ P+F +  I L+   +A+IAEIVR G+ A
Sbjct: 571 IPMMVLAFFIFF---------GLSGATGITI-PDFAAGIITLTLNASAYIAEIVRGGINA 620

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA++ +IP   +Q++  LK++++   +G  +L+ 
Sbjct: 621 VPVGQMEASRSLGLSYGRTMQKIILPQAIKIMIPSFVNQFVISLKDTTIISVIGVVELLQ 680

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+  T Q+  +  I   +YL +  ++      L  K+ 
Sbjct: 681 TGKIIVASTLQSTYVYFIIAVMYLIIITVLTRIAKVLEKKVK 722



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 34/70 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L G   T  LA      A ++G + G   ++  K V  +  +YV++ R IP +
Sbjct: 515 QNNYQQLLAGLGKTMVLALVSFALALVVGVIFGLMSVAPIKAVRIVASIYVDIIRGIPMM 574

Query: 143 VVIFFLYKSV 152
           V+ FF++  +
Sbjct: 575 VLAFFIFFGL 584


>gi|298254350|ref|ZP_06977936.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19A]
          Length = 721

 Score =  182 bits (462), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 10/251 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  +L     +          L   +  N + L      +     + + SF + IV+ +
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQL---LSGLGITLALTLISFAIAIVIGI 537

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                S     K+ + +  +++   +I G+P ++L A  +      P   + +  G  + 
Sbjct: 538 IFGMFS-VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQSP 590

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
             +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA + 
Sbjct: 591 INDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATKL 650

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++ 
Sbjct: 651 MLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLLT 710

Query: 383 LFMNRLNAKIA 393
               RL  +I 
Sbjct: 711 RLAKRLEKRIR 721



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 30/61 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALTLISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|148985136|ref|ZP_01818375.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|148998673|ref|ZP_01826112.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|149019232|ref|ZP_01834594.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|168486561|ref|ZP_02711069.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|168575696|ref|ZP_02721611.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|221231935|ref|YP_002511087.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225854706|ref|YP_002736218.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|225860926|ref|YP_002742435.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229894|ref|ZP_06963575.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298502762|ref|YP_003724702.1| amino acid ABC superfamily transporter ATP-binding protein/permease
           [Streptococcus pneumoniae TCH8431/19A]
 gi|307067889|ref|YP_003876855.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|147755510|gb|EDK62558.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|147922581|gb|EDK73699.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|147931102|gb|EDK82081.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|183570457|gb|EDT90985.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|183578152|gb|EDT98680.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|220674395|emb|CAR68945.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225723631|gb|ACO19484.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|225727804|gb|ACO23655.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238357|gb|ADI69488.1| amino acid ABC superfamily ATP binding cassette transporter,
           binding protein/permease protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|301794323|emb|CBW36748.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           INV104]
 gi|301800161|emb|CBW32766.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pneumoniae
           OXC141]
 gi|306409426|gb|ADM84853.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|327389476|gb|EGE87821.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 721

 Score =  182 bits (462), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|326804125|ref|YP_004321943.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650324|gb|AEA00507.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 505

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 19/229 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +       +   +T+  +A   VF   LG +L++      R    K    + + Y+  
Sbjct: 294 DWLSYWPYYWNGIKMTLLISAVSVVFGLTLGAILAVM-----RLTENKILSGIAMAYVEF 348

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             I G P ++ +               F  IGG    P  +S  IA+S  + A+I+EI+R
Sbjct: 349 --IRGTPLMIQVLFM------------FLGIGGLFNVPALLSALIAVSLNSGAYISEIIR 394

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AV + Q EAA +LGL      + V+ PQ++RSI P L ++++ L+K SS+   +G 
Sbjct: 395 GGIQAVDKEQTEAARSLGLDRLTTLKKVIFPQSLRSIWPALGNEFVTLIKESSIVSTIGI 454

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A+L      + + T Q I  +LI M IY  L+  +  F+NR   ++  K
Sbjct: 455 AELTFQTRAVTSITYQGIIPLLISMVIYFILTFTLTKFLNRWEKQMNAK 503



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 36/76 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY      G   T  ++   ++    +G ++   RL+ NK+++ I   YVE  R  P ++
Sbjct: 297 SYWPYYWNGIKMTLLISAVSVVFGLTLGAILAVMRLTENKILSGIAMAYVEFIRGTPLMI 356

Query: 144 VIFFLYKSVLSVLPIP 159
            + F++  +  +  +P
Sbjct: 357 QVLFMFLGIGGLFNVP 372


>gi|308069275|ref|YP_003870880.1| Probable amino-acid ABC transporter extracellular binding protein
           yqiX precursor [Paenibacillus polymyxa E681]
 gi|305858554|gb|ADM70342.1| Probable amino-acid ABC transporter extracellular binding protein
           yqiX precursor [Paenibacillus polymyxa E681]
          Length = 487

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 17/253 (6%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           F    S LS       + ++       +   +    T+  +A   +F F++G+++SL   
Sbjct: 252 FSTEASALSADRQVSSNNIVDIFWKYRSLYATGIGYTLLLSALGVLFGFIIGLIISLL-- 309

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R    +  + L   Y+   ++ G P LV + +   +H+   +    NF         
Sbjct: 310 ---RMSGVRIIEWLGTTYVE--ILRGTPMLVQLMI---IHYGVALTLGVNF-------TP 354

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             S  I LS  ++A++AEI R+G+ AV RGQMEAA +LG+   KA R V+LPQA +SI+P
Sbjct: 355 LQSGIITLSLNSSAYLAEIFRAGIQAVDRGQMEAARSLGMGRGKAMRHVILPQAFKSILP 414

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + ++++ ++K SS+   +G  D++     I N T + +   +I   IY  ++  ++  +
Sbjct: 415 AIGNEFITIIKESSIISTIGMVDIMYQAQVIKNITYEGLSPFVIAAAIYFVMTFSLSKLL 474

Query: 386 NRLNAKIALKEKK 398
                K+   + +
Sbjct: 475 GLWERKLRASDHR 487



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y +    G   T  L+  G++   IIG ++   R+S  +++ W+   YVE+ R  P L
Sbjct: 275 WKYRSLYATGIGYTLLLSALGVLFGFIIGLIISLLRMSGVRIIEWLGTTYVEILRGTPML 334

Query: 143 VVIFFLYKSV 152
           V +  ++  V
Sbjct: 335 VQLMIIHYGV 344


>gi|322375331|ref|ZP_08049844.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C300]
 gi|321279594|gb|EFX56634.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. C300]
          Length = 721

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASETSTDSTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRLISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|169834415|ref|YP_001694671.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|168996917|gb|ACA37529.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
          Length = 721

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|168484864|ref|ZP_02709809.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|172041971|gb|EDT50017.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
          Length = 721

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSFRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K    I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSFRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|241895264|ref|ZP_04782560.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871570|gb|EER75321.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 493

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V     GI+L +    L +    K  K L   YI    + G+P L+ + + Y    
Sbjct: 294 IGLAVIGVFFGIILGIL-FALMKLSSIKPFKWLASAYIEA--VRGVPLLIQVFIVY---- 346

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           F++  IA+   +AA++AEI+RSG+ AVP GQ EAA +LG T
Sbjct: 347 -------FGTQAIGVHVSSFLAGAIAMFLNSAAYVAEIIRSGIQAVPTGQTEAARSLGFT 399

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++LPQA+++I+P L ++++ ++K  S+   +G  +L      +   + +    
Sbjct: 400 KNQTMRYMILPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELTFQTSVVQGASFKPFIP 459

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++I   IY  L+  I+  +N    K+   +K
Sbjct: 460 LIITAAIYFILTFGISRLLNLFEKKLRKSDK 490



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 44/106 (41%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S YA   + G + T  LA  G+    I+G L    +LS+ K   W+   Y+E  R +P 
Sbjct: 279 ASKYAPYFVKGTLYTIGLAVIGVFFGIILGILFALMKLSSIKPFKWLASAYIEAVRGVPL 338

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L+ +F +Y    ++       +     MFLN+       +     A
Sbjct: 339 LIQVFIVYFGTQAIGVHVSSFLAGAIAMFLNSAAYVAEIIRSGIQA 384


>gi|28378733|ref|NP_785625.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254556936|ref|YP_003063353.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308180925|ref|YP_003925053.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28271570|emb|CAD64475.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254045863|gb|ACT62656.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308046416|gb|ADN98959.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 507

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 103/223 (46%), Gaps = 15/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                  +    T+        F F++GI+L+L              + L   Y+    I
Sbjct: 297 HYWKAFATGIEYTLIITVCSVFFGFIIGILLALARMAKGNPLKTAI-RWLATAYVEF--I 353

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V +   Y              +G     P   S  IA+S  + A++AE +R G+
Sbjct: 354 RGTPMMVQVMFVY------------FGLGLFVNLPALTSGIIAISLNSGAYVAEYIRGGI 401

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQ EAA +LG+++ +  R V+LPQA+++I P L ++++ L+K+SS+   +G  +L
Sbjct: 402 NSVDVGQTEAARSLGMSNGETMRYVVLPQALKNIWPSLGNEFITLIKDSSIVSIIGVTEL 461

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +     + + T + +  I++ M +Y  L+   +  +N    ++
Sbjct: 462 IYQSNIVRSDTYRGVAPIVVIMVLYFILTFTASRILNYFERRM 504



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----NKLVAWICRVYVEVFRNIP 140
           Y  A   G   T  +    +    IIG L+   R++        + W+   YVE  R  P
Sbjct: 298 YWKAFATGIEYTLIITVCSVFFGFIIGILLALARMAKGNPLKTAIRWLATAYVEFIRGTP 357

Query: 141 PLVVIFFLYKSVLSVLPIP 159
            +V + F+Y  +   + +P
Sbjct: 358 MMVQVMFVYFGLGLFVNLP 376


>gi|262282395|ref|ZP_06060163.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus sp. 2_1_36FAA]
 gi|262261686|gb|EEY80384.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus sp. 2_1_36FAA]
          Length = 485

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 11/221 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 275 YPQLLKGFGVTIALALLSFAIALVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 327

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P ++L A  +      P L + +     +   +F++  IALS  + A+IAEIVR G+ A
Sbjct: 328 VPLMILAAFIFW---GIPNLIE-SITNQQSPINDFVAGTIALSLNSGAYIAEIVRGGIQA 383

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L  
Sbjct: 384 VPVGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVIALKDTTIVSAIGLVELFQ 443

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  Q+  +  I   +YL +   +     RL  +I
Sbjct: 444 TGKNIIARNYQSFRMYAILAVLYLLIITFLTRLAKRLEKRI 484



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 44  CVNNVYNNMEKSNLSLGI--GFL-SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLA 100
             NN   N++K+     I   +L    +  E+D+  +     ++Y   +L GF  T  LA
Sbjct: 231 MFNNGLANLKKNGTYDKILEKYLADNSSESEVDESTILGLLKNNYPQ-LLKGFGVTIALA 289

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
                 A +IG + G   +S  K + WI  ++V+V R +P +++  F++  + +++    
Sbjct: 290 LLSFAIALVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGVPLMILAAFIFWGIPNLIESIT 349

Query: 161 HSIVL 165
           +    
Sbjct: 350 NQQSP 354


>gi|329922367|ref|ZP_08278044.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328942230|gb|EGG38501.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 480

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 118/256 (46%), Gaps = 18/256 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +  F    S L+     ++     F     +        T+  +A   +F F+LG++++L
Sbjct: 243 IQKFVDDASDLAAGRTAENLNTFEFFWKYRDYYAKGIQFTLLISALGVLFGFILGLIIAL 302

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    K  K L   YI   +I G P LV + + +            +       
Sbjct: 303 M-----RMSGVKILKFLATAYIE--IIRGTPMLVQLFIIHY-----------SLAAFDIK 344

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                S  + LS  +AA++AEI R+G+  V RGQ+EAA +LG+T  KA R ++LPQA++ 
Sbjct: 345 FSPIQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTKGKAMRHIILPQALKG 404

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P + ++++ ++K SS+   +G  D++     +   T   +  +L+   IY  L+ +++
Sbjct: 405 VLPAIGNEFVVIIKESSIVSFIGVFDIMYQAQILRGSTFAPLNPLLVAAMIYFILTFVLS 464

Query: 383 LFMNRLNAKIALKEKK 398
             +     K++  + +
Sbjct: 465 KLLGVWERKLSASDNR 480



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 42/100 (42%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            + +  +     Y      G   T  ++  G++   I+G ++   R+S  K++ ++   Y
Sbjct: 259 AENLNTFEFFWKYRDYYAKGIQFTLLISALGVLFGFILGLIIALMRMSGVKILKFLATAY 318

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +E+ R  P LV +F ++ S+ +              + +N
Sbjct: 319 IEIIRGTPMLVQLFIIHYSLAAFDIKFSPIQSGILTLSIN 358


>gi|120406518|ref|YP_956347.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119959336|gb|ABM16341.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 503

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     + + SFV+G+V++L    L+R         L   YIS  +I G P L
Sbjct: 295 WPLARAALTMTIPLTIISFVIGLVIALGV-ALARLSSNVVLTNLARFYIS--VIRGTPLL 351

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +           F           F +  IA S     + AEI+RS + ++P+G
Sbjct: 352 VQLFIVF-----------FALPEFGVRIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKG 400

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +GL +    R ++LPQA R  +PPL++  ++L+K++SLA  +   +L+     
Sbjct: 401 QWEAAETIGLNYAGTLRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRQAQI 460

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I   T +   +       Y  + ++++    R   ++   
Sbjct: 461 IAAPTFEFFALYGTAAVYYWVICLVLSFGQARFERRLERY 500



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 57/192 (29%), Gaps = 10/192 (5%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
                T  L     +   +I   V   RLS+N ++  + R Y+ V R  P LV +F ++ 
Sbjct: 300 AALTMTIPLTIISFVIGLVIALGVALARLSSNVVLTNLARFYISVIRGTPLLVQLFIVFF 359

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGL--------SFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++       D          LN  G                   A   +     G +  +
Sbjct: 360 ALPEFGVRIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIGLNYAGTLRRI 419

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              + +R         L  L   T L      LV   L+       P    F   G + V
Sbjct: 420 ILPQATRVAVPPLSNTLISLVKDTSL--ASTILVTELLRQAQIIAAPTFEFFALYGTAAV 477

Query: 263 SPEFMSLYIALS 274
               + L ++  
Sbjct: 478 YYWVICLVLSFG 489


>gi|315646647|ref|ZP_07899764.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315277973|gb|EFU41294.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 480

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 18/256 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +  F    S L+     ++     F     +        T+  +A    F F+LG++++L
Sbjct: 243 IQKFVDEASDLAAGRTTENLNTFEFFWKYRDYYAKGIQFTLLISALGVFFGFILGLIIAL 302

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    K  K L   YI   +I G P LV + + +            +       
Sbjct: 303 M-----RMSGVKILKFLATAYIE--IIRGTPMLVQLFIIHY-----------SLAAFDIK 344

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                S  + LS  +AA++AEI R+G+  V RGQ+EAA +LG+T  KA R ++LPQA++ 
Sbjct: 345 FSPIQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTRGKAMRHIILPQALKG 404

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P + ++++ ++K SS+   +G  D++     +   T   +  +L+   IY  L+ +++
Sbjct: 405 VLPAIGNEFVVIIKESSIVSFIGVYDIMYQAQILRGSTFAPLNPLLVAAMIYFILTFVLS 464

Query: 383 LFMNRLNAKIALKEKK 398
             +     K++  + +
Sbjct: 465 KLLGVWERKLSASDNR 480



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 72/206 (34%), Gaps = 10/206 (4%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + +  +     Y      G   T  ++  G+    I+G ++   R+S  K++ ++   Y+
Sbjct: 260 ENLNTFEFFWKYRDYYAKGIQFTLLISALGVFFGFILGLIIALMRMSGVKILKFLATAYI 319

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+ R  P LV +F ++ S+ +              + +N+                 V  
Sbjct: 320 EIIRGTPMLVQLFIIHYSLAAFDIKFSPIQSGILTLSINSAAYLAEIFRAGIQG---VDR 376

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
             L    SL  TR     H    +A    LP +     +I    ++V     Y + +   
Sbjct: 377 GQLEAARSLGMTRGKAMRHIILPQALKGVLPAIGNEFVVIIKESSIVSFIGVYDIMYQAQ 436

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSC 275
           +L    F   + ++P  ++  I    
Sbjct: 437 ILRGSTF---APLNPLLVAAMIYFIL 459


>gi|307706697|ref|ZP_07643503.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307617941|gb|EFN97102.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 721

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     S          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSSASTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|310642316|ref|YP_003947074.1| amino acid abc transporter, permease protein, his/glu/gln/arg/opine
           family [Paenibacillus polymyxa SC2]
 gi|309247266|gb|ADO56833.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Paenibacillus polymyxa SC2]
          Length = 487

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 17/253 (6%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           F    S LS       + ++   +   +   +    T+  +A   +F F++G+++SL   
Sbjct: 252 FSTEASALSADRQVSSNSIVDIFLKYRSFYATGIGYTLLLSALGVLFGFIIGLIISLL-- 309

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R    +  + L   Y+   ++ G P LV + +   +H+   +    NF         
Sbjct: 310 ---RMSGIRIIEWLGTAYVE--ILRGTPMLVQLMI---IHYGVALTLGVNF-------TP 354

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             S  I LS  ++A++AEI R+G+ AV RGQMEAA +LG+   KA R V+LPQA +SI+P
Sbjct: 355 LQSGIITLSLNSSAYLAEIFRAGIQAVDRGQMEAARSLGMGRGKAMRHVILPQAFKSILP 414

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + ++++ ++K SS+   +G  D++     I N T + +   +I   IY  ++  ++  +
Sbjct: 415 AIGNEFITIIKESSIISTIGMVDIMYQAQVIKNITYEGLSPFVIAAAIYFVMTFSLSKLL 474

Query: 386 NRLNAKIALKEKK 398
                K+   + +
Sbjct: 475 GLWERKLRASDHR 487



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +    G   T  L+  G++   IIG ++   R+S  +++ W+   YVE+ R  P LV 
Sbjct: 277 YRSFYATGIGYTLLLSALGVLFGFIIGLIISLLRMSGIRIIEWLGTAYVEILRGTPMLVQ 336

Query: 145 IFFLYKSV 152
           +  ++  V
Sbjct: 337 LMIIHYGV 344


>gi|332074851|gb|EGI85323.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 721

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 122/251 (48%), Gaps = 10/251 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  +L     +          L   +  N + L      +     + + SF + IV+ +
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQL---LSGLGITLALALISFAIAIVIGI 537

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                S     K+ + +  +++   +I G+P ++L A  +      P   + +  G  + 
Sbjct: 538 IFGTFS-VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQSP 590

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
             +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA + 
Sbjct: 591 INDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATKL 650

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++ 
Sbjct: 651 MLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLLT 710

Query: 383 LFMNRLNAKIA 393
               RL  +I 
Sbjct: 711 RLAKRLEKRIR 721



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGTFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|307709473|ref|ZP_07645930.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
 gi|307619787|gb|EFN98906.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
          Length = 721

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTIWGLLQNNYKQLLSGLGITLALAIISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALAIISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|70726105|ref|YP_253019.1| hypothetical protein SH1104 [Staphylococcus haemolyticus JCSC1435]
 gi|68446829|dbj|BAE04413.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 484

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 14/245 (5%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +++         ++  G F+   G  F     +T   I +   V G ++  F   L++  
Sbjct: 254 LINKYMDIASEQMVNDGSFIQKYGTFFLKGLQNT-IIISLIGVVCGAIIGSFI-ALAKLS 311

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             K       +YI    + G P LV + + +   F    L   +           +   I
Sbjct: 312 KFKIISLPATIYIEF--LRGTPMLVQVFIVF---FGTTALLGLDI-------SALICGTI 359

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   ++A+IAEI+R+G+ AV +GQ EAA  LGL + K    ++LPQA ++I+P L +++
Sbjct: 360 ALVINSSAYIAEIIRAGINAVDKGQTEAAQCLGLNYSKTMIHIILPQAFKNILPALGNEF 419

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L+K SS+   +G  +++     +   +      ++I   +Y  L+ +++  M+ +  +
Sbjct: 420 VTLIKESSIISTIGVGEIMFNAQVVQGISFDPFTPLIIAACMYFVLTFLLSRLMSLIEGR 479

Query: 392 IALKE 396
           +   +
Sbjct: 480 LKASD 484



 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T  L G  NT  ++  G++   IIG+ +   +LS  K+++    +Y+E  R  P LV 
Sbjct: 276 YGTFFLKGLQNTIIISLIGVVCGAIIGSFIALAKLSKFKIISLPATIYIEFLRGTPMLVQ 335

Query: 145 IFFLYKSVL 153
           +F ++    
Sbjct: 336 VFIVFFGTT 344


>gi|157150220|ref|YP_001450326.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|157075014|gb|ABV09697.1| glutamine ABC transporter permease and substrate binding protein
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 485

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 11/221 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L    +T+      F  + V+GI+  +F+         K  + +  +++   +I G
Sbjct: 275 YPQLLKGFGVTIALALLSFAIALVIGIIFGMFS-----VSPYKPLRWIAEIFVD--VIRG 327

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P ++L A  +      P L + +     T   +F++  IALS  + A+IAEIVR G+ A
Sbjct: 328 VPLMILAAFIFW---GIPNLIE-SITNQQTPINDFVAGTIALSLNSGAYIAEIVRGGIQA 383

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L  
Sbjct: 384 VPAGQMEASRSLGISYSKTMRKIILPQATKIMLPNFVNQFVITLKDTTIVSAIGLVELFQ 443

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  Q+  +  I   +YL +   +     RL  +I
Sbjct: 444 TGKNIIARNYQSFRMYAILAVLYLLIITFLTRLAKRLEKRI 484



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 44  CVNNVYNNMEKSNLSLGI--GFL-SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLA 100
             NN   N++K+     I   +L    +  E+D+  +     ++Y   +L GF  T  LA
Sbjct: 231 MFNNGLANLKKNGTYDKILEKYLADNSSESEVDESTILGLLKNNYPQ-LLKGFGVTIALA 289

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
                 A +IG + G   +S  K + WI  ++V+V R +P +++  F++  + +++    
Sbjct: 290 LLSFAIALVIGIIFGMFSVSPYKPLRWIAEIFVDVIRGVPLMILAAFIFWGIPNLIESIT 349

Query: 161 HSIVL 165
           +    
Sbjct: 350 NQQTP 354


>gi|184153353|ref|YP_001841694.1| amino acid ABC transporter substrate binding and permease
           components [Lactobacillus reuteri JCM 1112]
 gi|183224697|dbj|BAG25214.1| amino acid ABC transporter substrate binding and permease
           components [Lactobacillus reuteri JCM 1112]
          Length = 443

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +    +     I V S + G +L      L R    K   ++ + YI    + G P 
Sbjct: 236 YWRYFAKGIKYTLIITVVSVIFGFLLGTL-FALMRLSKNKFLHSIAVCYIEF--LRGTPM 292

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F         P  ++  IA+S  + A++AEI+RSG+ ++P 
Sbjct: 293 MVQIMFVY-----------FGIGALIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPL 341

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++  +  R V++PQA+++I P L ++ + LLK+SSL   +G ++L+    
Sbjct: 342 GQTEAARSLGMSKNETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQ 401

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +     ++ 
Sbjct: 402 LVQSATYKGVLPLFITMIIYFILTFTLSRILFYFEGRMK 440



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 31/69 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY      G   T  +    +I   ++GTL    RLS NK +  I   Y+E  R  P +V
Sbjct: 235 SYWRYFAKGIKYTLIITVVSVIFGFLLGTLFALMRLSKNKFLHSIAVCYIEFLRGTPMMV 294

Query: 144 VIFFLYKSV 152
            I F+Y  +
Sbjct: 295 QIMFVYFGI 303


>gi|15903163|ref|NP_358713.1| amino acid ABC transporter permease/amino acid-binding protein
           [Streptococcus pneumoniae R6]
 gi|15458747|gb|AAK99923.1| ABC transporter membrane spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
          Length = 721

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQ  +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQVTK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 71/192 (36%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + + +           G           T+ +  NA  ++   V G + ++      
Sbjct: 574 FWGIPNFIESIT-------GQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVG--- 623

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y  T     LP +  + L   ++     L     +    +   F +
Sbjct: 624 ---QMEASRSLGISYGKTMRKIILPQVTKLMLPNFVNQFVIALKDTTIVSAIGLVELFQT 680

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 681 GKIIIARNYQSF 692


>gi|307704942|ref|ZP_07641833.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
 gi|307621556|gb|EFO00602.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
          Length = 721

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TKLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|227551702|ref|ZP_03981751.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|227179143|gb|EEI60115.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
          Length = 487

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 283 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTVASIYVD--IIRG 335

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 336 IPMMV---LAFFIFFGLPGIVGFTI-------PDFIAGVITLTLNASAYIAEIVRGGINA 385

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 386 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 445

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 446 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 487



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  +  +YV++ R IP +
Sbjct: 280 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMM 339

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 340 VLAFFIFFGLP 350


>gi|289168045|ref|YP_003446314.1| ABC transporter membrane spanning permease-glutamine transport
           [Streptococcus mitis B6]
 gi|288907612|emb|CBJ22449.1| ABC transporter membrane spanning permease-glutamine transport
           [Streptococcus mitis B6]
          Length = 721

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 12/251 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTTPTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKI 392
                RL  +I
Sbjct: 710 TKLAKRLEKRI 720



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|322376796|ref|ZP_08051289.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M334]
 gi|321282603|gb|EFX59610.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M334]
          Length = 721

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     S          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSSASTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TKLAKRLEKRIR 721



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|308449227|ref|XP_003087895.1| hypothetical protein CRE_07965 [Caenorhabditis remanei]
 gi|308252035|gb|EFO95987.1| hypothetical protein CRE_07965 [Caenorhabditis remanei]
          Length = 762

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+      F+ + VLG++        SR     T + +  +Y++ F   G P LV   
Sbjct: 565 WNTLRITMMAFIIAMVLGLIFGFMKISTSR-----TLRGIAAVYVAVF--RGTPVLVWAF 617

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L Y   F  P L              F +    L+  + A++ EIVR GL AV  GQMEA
Sbjct: 618 LFY---FGLPQLTG-------VTGNVFWAGTATLALNSGAYLTEIVRGGLQAVDPGQMEA 667

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGL   K+ + V++PQA++   P + +Q++  LK+SSL + +GFA+L+     I   
Sbjct: 668 ARSLGLGWGKSMQRVVVPQAVKISTPAIINQFVITLKDSSLLLTIGFAELLYQAQQIYAA 727

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  E+++I   +Y  +  ++    N ++ K+
Sbjct: 728 NYRTTEMLIIVGIMYFVVITLLTCVANIVDRKV 760



 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G  NT  +     I A ++G + G  ++S ++ +  I  VYV VFR  P LV  F 
Sbjct: 559 ALGEGLWNTLRITMMAFIIAMVLGLIFGFMKISTSRTLRGIAAVYVAVFRGTPVLVWAFL 618

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  +  +  +  +   
Sbjct: 619 FYFGLPQLTGVTGNVFW 635


>gi|148543958|ref|YP_001271328.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|227364871|ref|ZP_03848917.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325682504|ref|ZP_08162021.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530992|gb|ABQ82991.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus reuteri DSM 20016]
 gi|227070075|gb|EEI08452.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324978343|gb|EGC15293.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 503

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +    +     I V S + G +L      L R    K   ++ + YI    + G P 
Sbjct: 296 YWRYFAKGIKYTLIITVVSVIFGFLLGTL-FALMRLSKNKFLHSIAVCYIEF--LRGTPM 352

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F         P  ++  IA+S  + A++AEI+RSG+ ++P 
Sbjct: 353 MVQIMFVY-----------FGIGALIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPL 401

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++  +  R V++PQA+++I P L ++ + LLK+SSL   +G ++L+    
Sbjct: 402 GQTEAARSLGMSKNETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQ 461

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +     ++ 
Sbjct: 462 LVQSATYKGVLPLFITMIIYFILTFTLSRILFYFEGRMK 500



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 31/69 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY      G   T  +    +I   ++GTL    RLS NK +  I   Y+E  R  P +V
Sbjct: 295 SYWRYFAKGIKYTLIITVVSVIFGFLLGTLFALMRLSKNKFLHSIAVCYIEFLRGTPMMV 354

Query: 144 VIFFLYKSV 152
            I F+Y  +
Sbjct: 355 QIMFVYFGI 363


>gi|293377691|ref|ZP_06623880.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|293571887|ref|ZP_06682903.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E980]
 gi|291608141|gb|EFF37447.1| glutamine ABC transporter, permease/substrate-binding protein
           [Enterococcus faecium E980]
 gi|292643691|gb|EFF61812.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 500

 Score =  180 bits (458), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 296 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTVASIYVD--IIRG 348

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 349 IPMMV---LAFFIFFGLPGIVGFTI-------PDFIAGVITLTLNASAYIAEIVRGGINA 398

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 399 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 458

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 459 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 500



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  +  +YV++ R IP +
Sbjct: 293 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMM 352

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 353 VLAFFIFFGLP 363


>gi|108801905|ref|YP_642102.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119871057|ref|YP_941009.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108772324|gb|ABG11046.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. MCS]
 gi|119697146|gb|ABL94219.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 489

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 14/231 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              + +         +     + V SF +G+V++L    L+R         +   YIS  
Sbjct: 273 WQLILDNLWPLARAALTMTIPLTVISFAIGLVIALGV-ALARLSPNVVLTNVARFYIS-- 329

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV + + +           F           F +  IA S     + AEI+RS
Sbjct: 330 IIRGTPLLVQLFIVF-----------FALPEFGIRIDPFPAAVIAFSLNVGGYAAEIIRS 378

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++++P+GQ EAA  +G+ +  + R ++LPQA R  +PPL++  ++L+K++SLA  +   
Sbjct: 379 AILSIPKGQWEAAETIGMNYPTSLRRIVLPQAARVAVPPLSNTLISLVKDTSLASTILVT 438

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+     +   T +   +       Y  + ++++    R+  ++     +
Sbjct: 439 ELLRQAQIVAAPTFEFFALYGTAAVYYWVICLVLSFGQGRIERRLERYVAR 489



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 3/107 (2%)

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           + AG       +   +    A A       T  L         +I   V   RLS N ++
Sbjct: 264 DTAGAPRSTWQLILDNLWPLARA---ALTMTIPLTVISFAIGLVIALGVALARLSPNVVL 320

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
             + R Y+ + R  P LV +F ++ ++       D          LN
Sbjct: 321 TNVARFYISIIRGTPLLVQLFIVFFALPEFGIRIDPFPAAVIAFSLN 367


>gi|116333810|ref|YP_795337.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus brevis ATCC 367]
 gi|116099157|gb|ABJ64306.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus brevis ATCC 367]
          Length = 492

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 15/224 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                  L+    T+        F F+LG++L+L        F     + L   Y+    
Sbjct: 281 WHYWKAFLTGVEYTLIITVCSVFFGFILGVLLALARMGQGGVFRT-GLRWLATAYVEF-- 337

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P +V +   Y              +G     P   S  IA+S  + A++AE +R G
Sbjct: 338 IRGTPMMVQVMFVY------------FGLGLIVNLPALTSGIIAISLNSGAYVAEYIRGG 385

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  GQ EAA +LG++     R V+LPQA+++I P L ++++ L+K+SS+   +G ++
Sbjct: 386 INSVDAGQTEAARSLGMSSGATMRYVILPQALKNIWPSLGNEFITLIKDSSIVSIIGVSE 445

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     + + T + +  I + M +Y  L+   +  +N    ++
Sbjct: 446 LIFQSNIVRSDTYRGVAPIAVIMVLYFILTFTASRILNYFERRM 489



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----VAWICRVYVEV 135
           TS   Y  A L G   T  +    +    I+G L+   R+    +    + W+   YVE 
Sbjct: 278 TSMWHYWKAFLTGVEYTLIITVCSVFFGFILGVLLALARMGQGGVFRTGLRWLATAYVEF 337

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIP 159
            R  P +V + F+Y  +  ++ +P
Sbjct: 338 IRGTPMMVQVMFVYFGLGLIVNLP 361


>gi|291539690|emb|CBL12801.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Roseburia intestinalis
           XB6B4]
          Length = 513

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 16/214 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALKYQ 243
             I V + ++G+V   F   + R  H++ G       L  +   ++ G P ++ + + Y 
Sbjct: 313 LLITVLALLVGVVFG-FLIAIVRTNHDRNGGLTILNALCKLYLTIVRGTPVMIQLLIIYY 371

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F             S  + + +   IA    +AA++AEIVRSG++AV  GQ EA  +L
Sbjct: 372 VIFQ------------SIDTGKIVVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 419

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +++    ++LPQA+++I+P L +++++LLK +S++  +G  DL   G  I + T +A
Sbjct: 420 GLNYKQTMMSIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLTKGGDIIRSVTYEA 479

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              ++    IYL + + ++  +N L  K+   E+
Sbjct: 480 FMPLIAVALIYLIMVMGLSKVVNLLERKLRSNER 513



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LV 125
            + +         S    +L G  NT  +    ++   + G L+   R + ++     ++
Sbjct: 287 GLSEKFYDNFVKDSRYVYLLKGLGNTLLITVLALLVGVVFGFLIAIVRTNHDRNGGLTIL 346

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
             +C++Y+ + R  P ++ +  +Y  +   
Sbjct: 347 NALCKLYLTIVRGTPVMIQLLIIYYVIFQS 376


>gi|241895266|ref|ZP_04782562.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871572|gb|EER75323.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 494

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V     GIVL +    L +    K  K + + YI    + G+P L+ + + Y    
Sbjct: 295 VGLAVIGVFFGIVLGVL-FALMKMSSIKPLKWIAVAYIEA--VRGVPLLIQVFIVY---- 347

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           F++  IA+   +AA++AEI+RSG+ AVP GQ EAA +LG T
Sbjct: 348 -------FGTQVIGIHVSSFLAGAIAMFLNSAAYVAEIIRSGIQAVPDGQTEAARSLGFT 400

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++LPQA+++I+P L ++++ ++K  S+   +G  +L      +   + +    
Sbjct: 401 KNQTMRYMILPQAIKNILPALGNEFVTVIKEGSVVSVIGVGELTFQASVVQGASFKPFLP 460

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++I   IY  L+  I+  +N    K+   +K
Sbjct: 461 LVITAAIYFILTFGISRLLNLFEKKLHKSDK 491



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 42/104 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA   + G   +  LA  G+    ++G L    ++S+ K + WI   Y+E  R +P L+
Sbjct: 282 QYAPYFIKGTEYSVGLAVIGVFFGIVLGVLFALMKMSSIKPLKWIAVAYIEAVRGVPLLI 341

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +F +Y     +       +     MFLN+       +     A
Sbjct: 342 QVFIVYFGTQVIGIHVSSFLAGAIAMFLNSAAYVAEIIRSGIQA 385


>gi|126437886|ref|YP_001073577.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126237686|gb|ABO01087.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 489

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 102/231 (44%), Gaps = 14/231 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              + +         +     + V SF +G+V++L    L+R         +   YIS  
Sbjct: 273 WQLILDNLWPLARAALTMTIPLTVISFAIGLVIALGV-ALARLSPNVVLTNVARFYIS-- 329

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV + + +           F           F +  IA S     + AEI+RS
Sbjct: 330 IIRGTPLLVQLFIVF-----------FALPEFGIRIDPFPAAVIAFSLNVGGYAAEIIRS 378

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++++P+GQ EAA  +G+ +  + R ++LPQA R  +PPL++  ++L+K++SLA  +   
Sbjct: 379 AILSIPKGQWEAAETIGMNYPTSLRRIVLPQAARVAVPPLSNTLISLVKDTSLASTILVT 438

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+     +   T +   +       Y  + ++++    R+  ++     +
Sbjct: 439 ELLRQAQIVAAPTFEFFALYGTAAVYYWVICLVLSFGQGRIERRLERYVAR 489



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 3/107 (2%)

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           + AG       +   +    A A       T  L         +I   V   RLS N ++
Sbjct: 264 DTAGAPRSTWQLILDNLWPLARA---ALTMTIPLTVISFAIGLVIALGVALARLSPNVVL 320

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
             + R Y+ + R  P LV +F ++ ++       D          LN
Sbjct: 321 TNVARFYISIIRGTPLLVQLFIVFFALPEFGIRIDPFPAAVIAFSLN 367


>gi|226307850|ref|YP_002767810.1| glutamine ABC transporter glutamine-binding/permease protein
           [Rhodococcus erythropolis PR4]
 gi|226186967|dbj|BAH35071.1| putative glutamine ABC transporter glutamine-binding/permease
           protein [Rhodococcus erythropolis PR4]
          Length = 482

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 17/222 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L    LT+  +      + VLG +  L      R       + +   Y+  F   
Sbjct: 276 TYPQLLKGLWLTIVLSVVSIAIALVLGAIFGLC-----RVSTNMFVRGIGTTYVDIF--R 328

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV     + ++F  P    F           F +  I LS    A++AEIVR G++
Sbjct: 329 GTPLLVQ---AFFIYFGIPAALHF-------QMSAFTAGIITLSLNAGAYMAEIVRGGIL 378

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEA+ +LG+++ K+ R V++PQA+R++IP   +Q++  LK++S+   +G A+L 
Sbjct: 379 SVDKGQMEASRSLGISYMKSMRKVIMPQAIRTMIPSYINQFVITLKDTSILSVIGLAELT 438

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  II +  Q+  + LI   +Y  + + +    NRL  +I
Sbjct: 439 QTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 480



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+   +  A ++G + G  R+S N  V  I   YV++FR  P LV  FF+
Sbjct: 280 LLKGLWLTIVLSVVSIAIALVLGAIFGLCRVSTNMFVRGIGTTYVDIFRGTPLLVQAFFI 339

Query: 149 YKSVLSVLPI 158
           Y  + + L  
Sbjct: 340 YFGIPAALHF 349


>gi|240145928|ref|ZP_04744529.1| putative amino acid ABC transporter, permease/amino acid-binding
           protein [Roseburia intestinalis L1-82]
 gi|257201957|gb|EEV00242.1| putative amino acid ABC transporter, permease/amino acid-binding
           protein [Roseburia intestinalis L1-82]
          Length = 513

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 16/214 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALKYQ 243
             I V + ++G+V   F   + R  H++ G       L  +   ++ G P ++ + + Y 
Sbjct: 313 LLITVLALLVGVVFG-FLIAIVRTNHDRNGGLTILNALCKLYLTIVRGTPVMIQLLIIYY 371

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F             S  + + +   IA    +AA++AEIVRSG++AV  GQ EA  +L
Sbjct: 372 VIFQ------------SIDTGKIVVAVIAFGLNSAAYVAEIVRSGIMAVDIGQFEAGRSL 419

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +++    ++LPQA+++I+P L +++++LLK +S++  +G  DL   G  I + T +A
Sbjct: 420 GLNYKQTMMSIILPQAVKNILPALCNEFISLLKETSISGYIGLMDLTKGGDIIRSVTYEA 479

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              ++    IYL + + ++  +N L  K+   E+
Sbjct: 480 FMPLIAVALIYLIMVMGLSKVVNLLERKLRSNER 513



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LV 125
            + +         S    +L G  NT  +    ++   + G L+   R + ++     ++
Sbjct: 287 GLGEKFYDNFVKDSRYVYLLKGLGNTLLITVLALLVGVVFGFLIAIVRTNHDRNGGLTIL 346

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
             +C++Y+ + R  P ++ +  +Y  +   
Sbjct: 347 NALCKLYLTIVRGTPVMIQLLIIYYVIFQS 376


>gi|148993850|ref|ZP_01823252.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|168489068|ref|ZP_02713267.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|147927675|gb|EDK78700.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|183572432|gb|EDT92960.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|332073579|gb|EGI84058.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
          Length = 721

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQ+ +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQSTK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 709

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 710 TRLAKRLEKRIR 721



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|194467780|ref|ZP_03073766.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194452633|gb|EDX41531.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 503

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +    +     I V S + G +L      L R    K   ++ + YI    + G P 
Sbjct: 296 YWRYFAKGIKYTLIITVVSVIFGFLLGTL-FALMRLSKNKFLHSIAVCYIEF--LRGTPM 352

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F         P  ++  IA+S  + A++AEI+RSG+ ++P 
Sbjct: 353 MVQIMFVY-----------FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPL 401

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++  +  R V++PQA+++I P L ++ + LLK+SSL   +G ++L+    
Sbjct: 402 GQTEAARSLGMSKNETFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVSELMYQTQ 461

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +     ++ 
Sbjct: 462 LVQSATYKGVLPLFITMIIYFILTFTLSRILLYFEGRMK 500



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 31/69 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY      G   T  +    +I   ++GTL    RLS NK +  I   Y+E  R  P +V
Sbjct: 295 SYWRYFAKGIKYTLIITVVSVIFGFLLGTLFALMRLSKNKFLHSIAVCYIEFLRGTPMMV 354

Query: 144 VIFFLYKSV 152
            I F+Y  +
Sbjct: 355 QIMFVYFGI 363


>gi|323154324|gb|EFZ40526.1| general L-amino acid transport system permease aapQ domain protein
           [Escherichia coli EPECa14]
          Length = 247

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 115/247 (46%), Positives = 160/247 (64%), Gaps = 1/247 (0%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +L  LP P  ++      FL+NRGL  P+  +      F+ + V+ I+LS+   R ++ +
Sbjct: 1   MLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIILSVGLFRFNKTY 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             KTG+      I+  LI GLP L        LH+D P L  FNF GG  + PE  +L +
Sbjct: 61  QIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTL 120

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTSQY
Sbjct: 121 ALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQY 180

Query: 332 LNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           LN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  N 
Sbjct: 181 LNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNR 240

Query: 391 KIALKEK 397
           +IA+ E+
Sbjct: 241 RIAIVER 247


>gi|229494909|ref|ZP_04388660.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rhodococcus erythropolis SK121]
 gi|229318133|gb|EEN84003.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rhodococcus erythropolis SK121]
          Length = 482

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 17/222 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L    LT+  +      + VLG +  L      R       + +   Y+  F   
Sbjct: 276 TYPQLLKGLWLTIVLSVVSIAIALVLGAIFGLC-----RVSTNMFVRGIGTTYVDIF--R 328

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV     + ++F  P    F           F +  I LS    A++AEIVR G++
Sbjct: 329 GTPLLVQ---AFFIYFGIPAALHF-------QMSAFTAGIITLSLNAGAYMAEIVRGGIL 378

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEA+ +LG+++ K+ R V++PQA+R++IP   +Q++  LK++S+   +G A+L 
Sbjct: 379 SVDKGQMEASRSLGISYMKSMRKVIMPQAIRTMIPSYINQFVITLKDTSILSVIGLAELT 438

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  II +  Q+  + LI   +Y  + + +    NRL  +I
Sbjct: 439 QTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 480



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+   +  A ++G + G  R+S N  V  I   YV++FR  P LV  FF+
Sbjct: 280 LLKGLWLTIVLSVVSIAIALVLGAIFGLCRVSTNMFVRGIGTTYVDIFRGTPLLVQAFFI 339

Query: 149 YKSVLSVLPI 158
           Y  + + L  
Sbjct: 340 YFGIPAALHF 349


>gi|261406265|ref|YP_003242506.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261282728|gb|ACX64699.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 480

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 18/256 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +  F    S L+     ++     F     +        T+  +A    F F+LG++++L
Sbjct: 243 IQKFVDDASDLAAGRTAENLNTFEFFWKYRDYYAKGIQFTLLISALGVFFGFILGLIVAL 302

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    K  K L   YI   +I G P LV + + +            +       
Sbjct: 303 M-----RMSGVKILKFLATAYIE--IIRGTPMLVQLFIIHY-----------SLAAFDIK 344

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                S  + LS  +AA++AEI R+G+  V RGQ+EAA +LG+T  KA R ++LPQA++ 
Sbjct: 345 FSPIQSGILTLSINSAAYLAEIFRAGIQGVDRGQLEAARSLGMTKGKAMRHIILPQALKG 404

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P + ++++ ++K SS+   +G  D++     +   T   +  +L+   IY  L+ +++
Sbjct: 405 VLPAIGNEFVVIIKESSIVSFIGVFDIMYQAQILRGSTFAPLNPLLVAAMIYFILTFVLS 464

Query: 383 LFMNRLNAKIALKEKK 398
             +     K++  + +
Sbjct: 465 KLLGVWERKLSASDNR 480



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 41/100 (41%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            + +  +     Y      G   T  ++  G+    I+G +V   R+S  K++ ++   Y
Sbjct: 259 AENLNTFEFFWKYRDYYAKGIQFTLLISALGVFFGFILGLIVALMRMSGVKILKFLATAY 318

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +E+ R  P LV +F ++ S+ +              + +N
Sbjct: 319 IEIIRGTPMLVQLFIIHYSLAAFDIKFSPIQSGILTLSIN 358


>gi|227524120|ref|ZP_03954169.1| ABC superfamily ATP binding cassette transporter, substrate binding
           and permease protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088751|gb|EEI24063.1| ABC superfamily ATP binding cassette transporter, substrate binding
           and permease protein [Lactobacillus hilgardii ATCC 8290]
          Length = 488

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 20/227 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            MF   +  +         + +   F  ++G+VL+L      R   ++  + L + Y   
Sbjct: 278 SMFHYWKYFASGVEYTILISLVSTFFGVLIGVVLALM-----RFSRQRWLRGLAISYTEF 332

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             I G P +V +   Y              IG     P  +S  IA+S  + A++AEI+R
Sbjct: 333 --IRGTPLMVQVMFVY------------FGIGVIINIPALISGMIAVSLNSGAYVAEIIR 378

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ +V +GQ EAA +LGLT     R V+LPQA ++I P L +++++L+K SS+   +G 
Sbjct: 379 GGINSVGKGQTEAAESLGLTKGDMMRYVILPQAFKNIWPALGNEFISLIKESSIVSIIGV 438

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            DL+     +   T + +  I + M +Y  ++ ++   +N    K+ 
Sbjct: 439 TDLIYQLNIVRADTYRGVMPIFVAMVLYFLMTFLLTRLLNHYEGKMK 485



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  ++        +IG ++   R S  + +  +   Y E  R  P +V 
Sbjct: 282 YWKYFASGVEYTILISLVSTFFGVLIGVVLALMRFSRQRWLRGLAISYTEFIRGTPLMVQ 341

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +  ++ IP
Sbjct: 342 VMFVYFGIGVIINIP 356


>gi|227509453|ref|ZP_03939502.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227512150|ref|ZP_03942199.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227084544|gb|EEI19856.1| amino acid ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227191165|gb|EEI71232.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 488

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 20/227 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            MF   +  +         + +   F  ++G+VL+L      R   ++  + L + Y   
Sbjct: 278 SMFHYWKYFASGVEYTILISLVSTFFGVLIGVVLALM-----RFSRQRWLRGLAISYTEF 332

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             I G P +V +   Y              IG     P  +S  IA+S  + A++AEI+R
Sbjct: 333 --IRGTPLMVQVMFVY------------FGIGVIINIPALISGMIAVSLNSGAYVAEIIR 378

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ +V +GQ EAA +LGLT     R V+LPQA ++I P L +++++L+K SS+   +G 
Sbjct: 379 GGINSVGKGQTEAAESLGLTKGDMMRYVILPQAFKNIWPALGNEFISLIKESSIVSIIGV 438

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            DL+     +   T + +  I + M +Y  ++ ++   +N    K+ 
Sbjct: 439 TDLIYQLNIVRADTYRGVMPIFVAMVLYFLMTFLLTRLLNHYEGKMK 485



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  ++        +IG ++   R S  + +  +   Y E  R  P +V 
Sbjct: 282 YWKYFASGVEYTILISLVSTFFGVLIGVVLALMRFSRQRWLRGLAISYTEFIRGTPLMVQ 341

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +  ++ IP
Sbjct: 342 VMFVYFGIGVIINIP 356


>gi|209559563|ref|YP_002286035.1| Glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes NZ131]
 gi|209540764|gb|ACI61340.1| Glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes NZ131]
          Length = 724

 Score =  180 bits (456), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|42518711|ref|NP_964641.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41582997|gb|AAS08607.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
          Length = 497

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            + +    +     I +FS ++  ++      L R         L + YI    I G P 
Sbjct: 288 YIPYFFKGIWYTIVITIFSVII-GIVLGIILALMRLSKNPILHWLAVCYIEF--IRGTPQ 344

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F      +     ++  IA+   + A++AE +RSG+ ++P+
Sbjct: 345 MVQILFVY-----------FGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPK 393

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL+ +KA R V++PQA+++I P L ++++ LLK+SSL   +G A+L+    
Sbjct: 394 GQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQ 453

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   T + +  + I M IY  ++  +   +N    ++   +
Sbjct: 454 LVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEKRMKRND 495



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  +    +I   ++G ++   RLS N ++ W+   Y+E  R  P +V 
Sbjct: 288 YIPYFFKGIWYTIVITIFSVIIGIVLGIILALMRLSKNPILHWLAVCYIEFIRGTPQMVQ 347

Query: 145 IFFLYKSV 152
           I F+Y  +
Sbjct: 348 ILFVYFGI 355


>gi|313890948|ref|ZP_07824570.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313120672|gb|EFR43789.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 724

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R+         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RIISSIFVDVVRGIPLMIVAAFIFWGIPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ A+P GQMEA+ +LG+ ++   R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAIPAGQMEASRSLGIPYKLTMRKVILPQAVKVMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 13/198 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+    +L G   T  L       A IIG + G   ++ +K +  I  ++V+V R IP +
Sbjct: 511 SNNYKQLLAGLGTTLSLTLISFAIAIIIGIIFGMMAVAPSKQLRIISSIFVDVVRGIPLM 570

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V  F++  + +++                   LS               +++  IV   
Sbjct: 571 IVAAFIFWGIPNLIESMTGHQSPINDFLAATIALSLNGG-----------AYIAEIVRGG 619

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                +     +  ++L + Y  T     LP  V + L   ++     L     +    +
Sbjct: 620 IEAIPAG--QMEASRSLGIPYKLTMRKVILPQAVKVMLPNFINQFVISLKDTTIVSAIGL 677

Query: 263 SPEFMSLYIALSCYTAAF 280
              F +  I ++    +F
Sbjct: 678 VELFQTGKIIIARNYQSF 695


>gi|111022633|ref|YP_705605.1| glutamine transport system permease protein [Rhodococcus jostii
           RHA1]
 gi|110822163|gb|ABG97447.1| probable glutamine transport system permease protein [Rhodococcus
           jostii RHA1]
          Length = 489

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 17/222 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    LT+         + VLG +  LF     R       + +   Y+  F   
Sbjct: 283 TYPLLLEGLWLTIVLTVVSIAIALVLGAIFGLF-----RVSTNIVLRGIGTTYVDVF--R 335

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV     + ++F  P    F           F +  I LS    A++AEIVR G++
Sbjct: 336 GTPLLVQ---AFFIYFGIPAALDF-------QMSAFTAGIITLSLNAGAYMAEIVRGGIL 385

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEA+ +LG+++ K+ + V++PQA+R++IP   +Q++  LK++S+   +G A+L 
Sbjct: 386 SVDKGQMEASRSLGISYLKSMQKVVMPQAVRTMIPSYINQFVITLKDTSILSVIGLAELT 445

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  II +  Q+  + LI   +Y  + + +    NRL  +I
Sbjct: 446 QTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 487



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L    +  A ++G + G  R+S N ++  I   YV+VFR  P LV  FF+
Sbjct: 287 LLEGLWLTIVLTVVSIAIALVLGAIFGLFRVSTNIVLRGIGTTYVDVFRGTPLLVQAFFI 346

Query: 149 YKSVLSV 155
           Y  + + 
Sbjct: 347 YFGIPAA 353


>gi|71910889|ref|YP_282439.1| transporter [Streptococcus pyogenes MGAS5005]
 gi|71853671|gb|AAZ51694.1| transporter [Streptococcus pyogenes MGAS5005]
          Length = 724

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|50914391|ref|YP_060363.1| glutamine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
 gi|50903465|gb|AAT87180.1| Glutamine-binding protein [Streptococcus pyogenes MGAS10394]
          Length = 724

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|139473633|ref|YP_001128349.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134271880|emb|CAM30117.1| putative glutamine ABC transporter,glutamine-binding
           protein/permease protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 724

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|306825135|ref|ZP_07458477.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Streptococcus sp.
           oral taxon 071 str. 73H25AP]
 gi|304432571|gb|EFM35545.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Streptococcus sp.
           oral taxon 071 str. 73H25AP]
          Length = 721

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 122/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          +   +  N + L          A I F  + V+GI+  
Sbjct: 481 ILDKYLASETSTDSTSTVDETTIWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 540

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 541 MFS-----VSPYKSLRLISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 589

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 590 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 649

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 650 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLIIITLL 709

Query: 382 ALFMNRLNAKIA 393
                 L  +I 
Sbjct: 710 TRLAKGLEKRIR 721



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 514 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFI 573

Query: 149 Y 149
           +
Sbjct: 574 F 574


>gi|120405655|ref|YP_955484.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119958473|gb|ABM15478.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium vanbaalenii PYR-1]
          Length = 492

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 13/217 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     + V S  + +VL +    L R       +A+   Y+  F   G P L
Sbjct: 287 FPILMEGLRLTLILTVVSIAIALVLGVMFG-LFRVSRSIWLRAIGTTYVDIF--RGTPLL 343

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V     + ++F  P    F             +  I LS    A++ EIVR G+ +V +G
Sbjct: 344 VQ---AFFIYFGVPSALDF-------RMTALTAGIITLSLNAGAYMTEIVRGGIQSVDKG 393

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LG+ +    R V+LPQA+R++IP   +Q++  LK++S+   +G A+L   G  
Sbjct: 394 QMEAARSLGIGYLPTMRKVILPQAIRTMIPSYVNQFVITLKDTSILSVIGIAELTQTGRL 453

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           II +  Q+  + LI   IY  + + +    +RL  ++
Sbjct: 454 IIARNYQSFTMWLIIGVIYFIVIMALTKLSDRLERRL 490



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L    +  A ++G + G  R+S +  +  I   YV++FR  P LV  FF+
Sbjct: 290 LMEGLRLTLILTVVSIAIALVLGVMFGLFRVSRSIWLRAIGTTYVDIFRGTPLLVQAFFI 349

Query: 149 YKSVLSV 155
           Y  V S 
Sbjct: 350 YFGVPSA 356


>gi|311898324|dbj|BAJ30732.1| putative amino acid ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 346

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 113/269 (42%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R     V+       +  +             +  +   +     T++  A   +   V 
Sbjct: 27  RWASVAVIAVLAAMLLHVLFTNEALDWAFVGAVLRDPTVIHGIWSTLELTALAMLMGVVG 86

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-------LKYQLHFDKP 249
           G++L++      R            LYI  F   G P LV +        L  Q+    P
Sbjct: 87  GVLLAVM-----RLSRNPVLSGTAWLYIWIF--RGTPVLVQLVFWNNIGVLWKQISLGVP 139

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F     +T+ P F +  + L    AA++AEIVR+G+ +V  GQ EAA ALG++   
Sbjct: 140 FGPAFWSQESNTLVPVFTAALLGLGLNEAAYMAEIVRAGIQSVDEGQAEAAHALGMSRAT 199

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R ++LPQAMR IIPP  ++ +++LK +SL   +   +L + G  I  +T + I  ++ 
Sbjct: 200 ALRRIVLPQAMRVIIPPTGNETISMLKTTSLVQVIALVELFTAGHDIATRTYKPIPAMIA 259

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL L+ ++ +    L    A    +
Sbjct: 260 VSIYYLLLTSILTVGQYYLERHFARGANR 288



 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  +T  L    M+   + G L+   RLS N +++    +Y+ +FR  P LV + F    
Sbjct: 68  GIWSTLELTALAMLMGVVGGVLLAVMRLSRNPVLSGTAWLYIWIFRGTPVLVQLVFWNNI 127

Query: 152 VLSV 155
            +  
Sbjct: 128 GVLW 131


>gi|94990641|ref|YP_598741.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10270]
 gi|94544149|gb|ABF34197.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10270]
          Length = 724

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|94988748|ref|YP_596849.1| glutamine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992573|ref|YP_600672.1| glutamine-binding protein / glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS2096]
 gi|94542256|gb|ABF32305.1| glutamine-binding protein [Streptococcus pyogenes MGAS9429]
 gi|94546081|gb|ABF36128.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS2096]
          Length = 724

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|71903722|ref|YP_280525.1| transporter [Streptococcus pyogenes MGAS6180]
 gi|71802817|gb|AAX72170.1| transporter [Streptococcus pyogenes MGAS6180]
          Length = 724

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDIVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V++ R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDIVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|94994565|ref|YP_602663.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10750]
 gi|306827161|ref|ZP_07460451.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus pyogenes ATCC 10782]
 gi|94548073|gb|ABF38119.1| Glutamine-binding protein / Glutamine transport system permease
           protein glnP [Streptococcus pyogenes MGAS10750]
 gi|304430617|gb|EFM33636.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Streptococcus pyogenes ATCC 10782]
          Length = 724

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTAFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 72/208 (34%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I   +
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTAF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|257878496|ref|ZP_05658149.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257894317|ref|ZP_05673970.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257812724|gb|EEV41482.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257830696|gb|EEV57303.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
          Length = 535

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 331 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTIASIYVD--IIRG 383

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 384 IPMMV---LAFFIFFGLPGIVGFTI-------PDFLAGVITLTLNASAYIAEIVRGGINA 433

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 434 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 493

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 494 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 535



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  I  +YV++ R IP +
Sbjct: 328 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMM 387

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 388 VLAFFIFFGLP 398


>gi|257882917|ref|ZP_05662570.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884373|ref|ZP_05664026.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257889304|ref|ZP_05668957.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260560085|ref|ZP_05832263.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207427|ref|ZP_05922113.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289566473|ref|ZP_06446898.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|257818575|gb|EEV45903.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257820211|gb|EEV47359.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257825664|gb|EEV52290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260073920|gb|EEW62244.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078318|gb|EEW66023.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289161738|gb|EFD09613.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
          Length = 535

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 331 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTIASIYVD--IIRG 383

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 384 IPMMV---LAFFIFFGLPGIVGFTI-------PDFLAGVITLTLNASAYIAEIVRGGINA 433

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 434 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 493

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 494 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 535



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  I  +YV++ R IP +
Sbjct: 328 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTIASIYVDIIRGIPMM 387

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 388 VLAFFIFFGLP 398


>gi|19746296|ref|NP_607432.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232]
 gi|19748486|gb|AAL97931.1| hypothetical protein spyM18_1327 [Streptococcus pyogenes MGAS8232]
          Length = 724

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|21910533|ref|NP_664801.1| putative glutamine ABC transporter glutamine-binding
           protein/permease protein [Streptococcus pyogenes
           MGAS315]
 gi|28895773|ref|NP_802123.1| hypothetical protein SPs0861 [Streptococcus pyogenes SSI-1]
 gi|21904733|gb|AAM79604.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus pyogenes
           MGAS315]
 gi|28811022|dbj|BAC63956.1| hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 724

 Score =  178 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTAFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 72/208 (34%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I   +
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTAF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|300727963|ref|ZP_07061341.1| ABC-type amino acid transport/signal transduction system
           [Prevotella bryantii B14]
 gi|299774805|gb|EFI71419.1| ABC-type amino acid transport/signal transduction system
           [Prevotella bryantii B14]
          Length = 496

 Score =  178 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 114/226 (50%), Gaps = 14/226 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+       + S +LG ++++  T   R+ + K    L  +Y    ++ G
Sbjct: 284 YLYLLHGLGNTILITVFAIIISLILGSLIAIVRTSHDRNGNMKFLNTLCRVY--LTIVRG 341

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            PT+V + + Y + F             S    + +   +A    +AA++AE++RSG+++
Sbjct: 342 TPTMVQLLIIYYVIF------------ASADVSKVVVAIVAFGLNSAAYLAEVIRSGIMS 389

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQMEA  +LG+++ +  R V+LPQA ++++P + ++ + LLK +S++  +G  DL  
Sbjct: 390 IDRGQMEAGRSLGMSYAQTMRFVILPQAYKNVLPAIGNELITLLKETSISGYIGLVDLTK 449

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I + T  A+  + +   IYL L + +   ++R+  K+   E+
Sbjct: 450 GSDIIRSITYDAMLPLGVVALIYLVLVMSLEAGVSRIEKKLRKNER 495



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRV 131
           + +  +  Y   +L G  NT  +    +I + I+G+L+   R S       K +  +CRV
Sbjct: 276 MDFLVEHRYL-YLLHGLGNTILITVFAIIISLILGSLIAIVRTSHDRNGNMKFLNTLCRV 334

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSV 155
           Y+ + R  P +V +  +Y  + + 
Sbjct: 335 YLTIVRGTPTMVQLLIIYYVIFAS 358


>gi|227890364|ref|ZP_04008169.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849178|gb|EEJ59264.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 500

 Score =  178 bits (453), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            + +    +     I +FS ++  ++      L R         L + YI    I G P 
Sbjct: 291 YIPYFFKGIWYTIVITIFSVII-GIVLGIILALMRLSKNPILHWLAVCYIEF--IRGTPQ 347

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F      +     ++  IA+   + A++AE +RSG+ ++P+
Sbjct: 348 MVQILFVY-----------FGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPK 396

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL+ +KA R V++PQA+++I P L ++++ LLK+SSL   +G A+L+    
Sbjct: 397 GQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQ 456

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   T + +  + I M IY  ++  +   +N    ++   +
Sbjct: 457 LVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEKRMKRND 498



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  +    +I   ++G ++   RLS N ++ W+   Y+E  R  P +V 
Sbjct: 291 YIPYFFKGIWYTIVITIFSVIIGIVLGIILALMRLSKNPILHWLAVCYIEFIRGTPQMVQ 350

Query: 145 IFFLYKSV 152
           I F+Y  +
Sbjct: 351 ILFVYFGI 358


>gi|117620284|ref|YP_857306.1| amino acid ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117561691|gb|ABK38639.1| amino acid ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 326

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 15/215 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +    K+ + + +  I+L   A  L+R       + L + Y+   LI G P LV I +
Sbjct: 126 WGVWVTVKLSLVAGIFAILLGTLAG-LARLSPNPALRNLAVTYVE--LIRGTPLLVQIFI 182

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG       F +   AL+ +T A++AEIVR+G+ ++ +GQMEA 
Sbjct: 183 VY------------FFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRAGISSIHKGQMEAG 230

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG+T  +  R V+LPQA + ++PPL  Q++NL+K+SSL   +   DL   G  +++ T
Sbjct: 231 RSLGMTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSST 290

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               E+      +YL L+  ++  + RL  K A  
Sbjct: 291 FSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYARS 325



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 31/61 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+    I A ++GTL G  RLS N  +  +   YVE+ R  P LV IF +Y  
Sbjct: 127 GVWVTVKLSLVAGIFAILLGTLAGLARLSPNPALRNLAVTYVELIRGTPLLVQIFIVYFF 186

Query: 152 V 152
           +
Sbjct: 187 I 187


>gi|152997696|ref|YP_001342531.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150838620|gb|ABR72596.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 315

 Score =  178 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 72/224 (32%), Positives = 114/224 (50%), Gaps = 15/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           N  +   T  +    ++ V S V  +V+ LFA  L+R       + L + YI   LI G 
Sbjct: 107 NWNIGPLTWGLVMTLQLSVVSLVFAVVIGLFAG-LARISTNPALRYLSVTYIE--LIRGT 163

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y             FIG       F +   ALS +T A+IAEIVRSG+ ++
Sbjct: 164 PLLVQIFIFY------------FFIGTVLDLDRFTAGVAALSVFTGAYIAEIVRSGIQSI 211

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQMEAA +LG+ + +A   V+LPQA +  +PP+  Q++NL+K+SSL   +   DL   
Sbjct: 212 SPGQMEAARSLGMNYVQAMVNVILPQAFKRTLPPMAGQFINLIKDSSLVSVISITDLTKA 271

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  +++ T    E+      +YL L+  ++  + RL  +++  +
Sbjct: 272 GREVVSSTFAPFEVWFAVALMYLVLTGGLSWAIQRLEKRLSASD 315



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L+   ++ A +IG   G  R+S N  + ++   Y+E+ R  P LV IF  Y  
Sbjct: 116 GLVMTLQLSVVSLVFAVVIGLFAGLARISTNPALRYLSVTYIELIRGTPLLVQIFIFYFF 175

Query: 152 V 152
           +
Sbjct: 176 I 176


>gi|226365139|ref|YP_002782922.1| glutamine ABC transporter glutamine-binding/permease protein
           [Rhodococcus opacus B4]
 gi|226243629|dbj|BAH53977.1| putative glutamine ABC transporter glutamine-binding/permease
           protein [Rhodococcus opacus B4]
          Length = 489

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 17/222 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    LT+         + VLG +  LF     R       + +   Y+  F   
Sbjct: 283 TYPLLLEGLWLTIVLTVVSIAIALVLGAIFGLF-----RVSTNIVLRGIGTTYVDVF--R 335

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV     + ++F  P    F           F +  I LS    A++AEIVR G++
Sbjct: 336 GTPLLVQ---AFFIYFGIPAALDF-------QMSAFTAGIITLSLNAGAYMAEIVRGGIL 385

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEA+ +LG+++ K+ + V++PQA+R++IP   +Q++  LK++S+   +G A+L 
Sbjct: 386 SVDKGQMEASRSLGISYLKSMQKVVMPQAVRTMIPSYINQFVITLKDTSILSVIGLAELT 445

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  II +  Q+  + LI   +Y  + + +    NRL  +I
Sbjct: 446 QTGRIIIARNFQSFNMWLIIGVMYFIIIMALTKLSNRLEKRI 487



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L    +  A ++G + G  R+S N ++  I   YV+VFR  P LV  FF+
Sbjct: 287 LLEGLWLTIVLTVVSIAIALVLGAIFGLFRVSTNIVLRGIGTTYVDVFRGTPLLVQAFFI 346

Query: 149 YKSVLSV 155
           Y  + + 
Sbjct: 347 YFGIPAA 353


>gi|227529156|ref|ZP_03959205.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227351000|gb|EEJ41291.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 501

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +    ++    I + S   G +L      L R    K    + + YI    + G P 
Sbjct: 294 YWRYFAKGLEYTLIITIVSVFFGFILGTL-FALMRLSKNKLLHTIAVCYIEF--LRGTPM 350

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F         P  ++  IA+S  + A++AEI+RSG+ ++P 
Sbjct: 351 MVQIMFVY-----------FGIGAIIQSLPALLAGIIAVSLNSGAYVAEIIRSGIQSIPL 399

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG+   KA R V++PQA+++I P L ++ + LLK+SSL   +G  +L+    
Sbjct: 400 GQTEAARSLGMDKNKAFRYVIMPQALKNIWPALGNELITLLKDSSLVSVIGVTELMFQTQ 459

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + + T + +  + I M IY  L+  ++  +     ++ 
Sbjct: 460 LVQSATYKGVLPLFITMMIYFILTFTLSRILLYFEGRMK 498



 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 31/69 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY      G   T  +    +    I+GTL    RLS NKL+  I   Y+E  R  P +V
Sbjct: 293 SYWRYFAKGLEYTLIITIVSVFFGFILGTLFALMRLSKNKLLHTIAVCYIEFLRGTPMMV 352

Query: 144 VIFFLYKSV 152
            I F+Y  +
Sbjct: 353 QIMFVYFGI 361


>gi|259501631|ref|ZP_05744533.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
 gi|259166916|gb|EEW51411.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
          Length = 498

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 31/318 (9%)

Query: 92  GFVNTFWLAF-SGMIPATIIGTLVGAGRLSANKLVAWI--------CRVYVEVFRNIPPL 142
           G +NT  LA  SG + A ++  L+       N  +               + V +N P L
Sbjct: 191 GKINTLVLALQSGKVSAVVMEELIAKAYAHNNPSLYCFKSDLKEPQAGNAIAVAKNQPDL 250

Query: 143 V------VIFFLYKSVLSVLPIPDHSIVLPFGMFL--NNRGLSFPTLTMDTNAKIFVFSF 194
           +      V   + K ++    +P  +  +          +   +    ++    I +FS 
Sbjct: 251 LKEVNKTVDKVIAKKLVLTKFLPQAAKSMKKSTAQKDPFKYAPYFIKGIELTLVITIFSV 310

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G++L      L R       K   + YI   LI G P +V I   Y           F
Sbjct: 311 LIGVILGTIL-ALMRLSSHLALKIPAICYIE--LIRGTPQMVQILFVY-----------F 356

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                       ++  IA+   + A++AE +RSG+ ++P GQ EAA +LGL+     R V
Sbjct: 357 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 416

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q +  +++ M IY
Sbjct: 417 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 476

Query: 375 LSLSIMIALFMNRLNAKI 392
             ++  +   ++ +  ++
Sbjct: 477 FIMTFTLTRILSYMERRM 494



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 36/77 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   I+GT++   RLS++  +      Y+E+ R  P +V 
Sbjct: 291 YAPYFIKGIELTLVITIFSVLIGVILGTILALMRLSSHLALKIPAICYIELIRGTPQMVQ 350

Query: 145 IFFLYKSVLSVLPIPDH 161
           I F+Y  + +++     
Sbjct: 351 ILFVYFGIGAIIQNMSA 367


>gi|315653694|ref|ZP_07906614.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|315489056|gb|EFU78698.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
          Length = 498

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 31/318 (9%)

Query: 92  GFVNTFWLAF-SGMIPATIIGTLVGAGRLSANKLVAWI--------CRVYVEVFRNIPPL 142
           G +NT  LA  SG + A ++  L+       N  +               + V +N P L
Sbjct: 191 GKINTLVLALQSGKVSAVVMEELIAKAYAHNNPSLYCFKSDLKEPQAGNAIAVAKNQPDL 250

Query: 143 V------VIFFLYKSVLSVLPIPDHSIVLPFGMFL--NNRGLSFPTLTMDTNAKIFVFSF 194
           +      V   + K ++    +P  +  +          +   +    ++    I +FS 
Sbjct: 251 LKEVNKTVDKVIAKKLVLTKFLPQAAKSMKKSTAKKDPFKYAPYFIKGIELTLVITIFSV 310

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G++L      L R       K   + YI   LI G P +V I   Y           F
Sbjct: 311 LIGVILGTIL-ALMRLSSHLALKIPAICYIE--LIRGTPQMVQILFVY-----------F 356

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                       ++  IA+   + A++AE +RSG+ ++P GQ EAA +LGL+     R V
Sbjct: 357 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 416

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q +  +++ M IY
Sbjct: 417 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 476

Query: 375 LSLSIMIALFMNRLNAKI 392
             ++  +   ++ +  ++
Sbjct: 477 FIMTFTLTRILSYMERRM 494



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 36/77 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   I+GT++   RLS++  +      Y+E+ R  P +V 
Sbjct: 291 YAPYFIKGIELTLVITIFSVLIGVILGTILALMRLSSHLALKIPAICYIELIRGTPQMVQ 350

Query: 145 IFFLYKSVLSVLPIPDH 161
           I F+Y  + +++     
Sbjct: 351 ILFVYFGIGAIIQNMSA 367


>gi|302191162|ref|ZP_07267416.1| glutamine ABC transporter substrate binding/permease protein
           [Lactobacillus iners AB-1]
 gi|309803182|ref|ZP_07697279.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           11V1-d]
 gi|308164690|gb|EFO66940.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           11V1-d]
          Length = 492

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 31/318 (9%)

Query: 92  GFVNTFWLAF-SGMIPATIIGTLVGAGRLSANKLVAWI--------CRVYVEVFRNIPPL 142
           G +NT  LA  SG + A ++  L+       N  +               + V +N P L
Sbjct: 185 GKINTLVLALQSGKVSAVVMEELIAKAYAHNNPSLYCFKSDLKEPQAGNAIAVAKNQPDL 244

Query: 143 V------VIFFLYKSVLSVLPIPDHSIVLPFGMFL--NNRGLSFPTLTMDTNAKIFVFSF 194
           +      V   + K ++    +P  +  +          +   +    ++    I +FS 
Sbjct: 245 LKEVNKTVDKVIAKKLVLTKFLPQAAKSMKKSTAQKDPFKYAPYFIKGIELTLVITIFSV 304

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G++L      L R       K   + YI   LI G P +V I   Y           F
Sbjct: 305 LIGVILGTIL-ALMRLSSHLALKIPAICYIE--LIRGTPQMVQILFVY-----------F 350

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                       ++  IA+   + A++AE +RSG+ ++P GQ EAA +LGL+     R V
Sbjct: 351 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 410

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q +  +++ M IY
Sbjct: 411 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 470

Query: 375 LSLSIMIALFMNRLNAKI 392
             ++  +   ++ +  ++
Sbjct: 471 FIMTFTLTRILSYMERRM 488



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 36/77 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   I+GT++   RLS++  +      Y+E+ R  P +V 
Sbjct: 285 YAPYFIKGIELTLVITIFSVLIGVILGTILALMRLSSHLALKIPAICYIELIRGTPQMVQ 344

Query: 145 IFFLYKSVLSVLPIPDH 161
           I F+Y  + +++     
Sbjct: 345 ILFVYFGIGAIIQNMSA 361


>gi|268319123|ref|YP_003292779.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
 gi|262397498|emb|CAX66512.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
          Length = 497

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 106/222 (47%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            + +    +     I +FS ++  ++      L R           + YI    I G P 
Sbjct: 288 YIPYFFKGIWYTIVITIFSVII-GIVLGIILALMRLSKNPILHWFAVCYIEF--IRGTPQ 344

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I   Y           F      +     ++  IA+   + A++AE +RSG+ ++P+
Sbjct: 345 MVQILFVY-----------FGIGYLISNLSALVAGIIAIGLNSGAYVAEDIRSGIDSLPK 393

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL+ +KA R V++PQA+++I P L ++++ LLK+SSL   +G A+L+    
Sbjct: 394 GQMEAARSLGLSRQKAFRYVIIPQAIKNIWPALGNEFITLLKDSSLVSVIGVAELMYQTQ 453

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   T + +  + I M IY  ++  +   +N    ++   +
Sbjct: 454 LVQTSTYKGVLPLFIAMIIYFIMTFSLTRLLNHFEKRMKRND 495



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  +    +I   ++G ++   RLS N ++ W    Y+E  R  P +V 
Sbjct: 288 YIPYFFKGIWYTIVITIFSVIIGIVLGIILALMRLSKNPILHWFAVCYIEFIRGTPQMVQ 347

Query: 145 IFFLYKSV 152
           I F+Y  +
Sbjct: 348 ILFVYFGI 355


>gi|309804770|ref|ZP_07698834.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           09V1-c]
 gi|309806268|ref|ZP_07700281.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|312871595|ref|ZP_07731687.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|312871955|ref|ZP_07732037.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|312873247|ref|ZP_07733303.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|312874656|ref|ZP_07734680.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|325911684|ref|ZP_08174091.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325913019|ref|ZP_08175392.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|329921097|ref|ZP_08277620.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
 gi|308165880|gb|EFO68099.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           09V1-c]
 gi|308167252|gb|EFO69418.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|311089886|gb|EFQ48306.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311091258|gb|EFQ49646.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|311092532|gb|EFQ50894.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092820|gb|EFQ51172.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|325476450|gb|EGC79609.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325477699|gb|EGC80838.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|328935004|gb|EGG31493.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
          Length = 492

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 31/318 (9%)

Query: 92  GFVNTFWLAF-SGMIPATIIGTLVGAGRLSANKLVAWI--------CRVYVEVFRNIPPL 142
           G +NT  LA  SG + A ++  L+       N  +               + V +N P L
Sbjct: 185 GKINTLVLALQSGKVSAVVMEELIAKAYAHNNPSLYCFKSDLKEPQAGNAIAVAKNQPDL 244

Query: 143 V------VIFFLYKSVLSVLPIPDHSIVLPFGMFL--NNRGLSFPTLTMDTNAKIFVFSF 194
           +      V   + K ++    +P  +  +          +   +    ++    I +FS 
Sbjct: 245 LKEVNKTVDKVIAKKLVLTKFLPQAAKSMKKSTAKKDPFKYAPYFIKGIELTLVITIFSV 304

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G++L      L R       K   + YI   LI G P +V I   Y           F
Sbjct: 305 LIGVILGTIL-ALMRLSSHLALKIPAICYIE--LIRGTPQMVQILFVY-----------F 350

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                       ++  IA+   + A++AE +RSG+ ++P GQ EAA +LGL+     R V
Sbjct: 351 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 410

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q +  +++ M IY
Sbjct: 411 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 470

Query: 375 LSLSIMIALFMNRLNAKI 392
             ++  +   ++ +  ++
Sbjct: 471 FIMTFTLTRILSYMERRM 488



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 36/77 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   I+GT++   RLS++  +      Y+E+ R  P +V 
Sbjct: 285 YAPYFIKGIELTLVITIFSVLIGVILGTILALMRLSSHLALKIPAICYIELIRGTPQMVQ 344

Query: 145 IFFLYKSVLSVLPIPDH 161
           I F+Y  + +++     
Sbjct: 345 ILFVYFGIGAIIQNMSA 361


>gi|83589975|ref|YP_429984.1| amino acid ABC transporter permease [Moorella thermoacetica ATCC
           39073]
 gi|83572889|gb|ABC19441.1| amino acid ABC transporter membrane protein, PAAT family [Moorella
           thermoacetica ATCC 39073]
          Length = 237

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 11/218 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            KI + +  LG +L L A  + R    +    L   Y+  F   G P LV I + Y    
Sbjct: 19  LKITLVAVSLGCILGLVAG-MGRLSRRRLTSFLATCYVDFF--RGTPLLVQIFIVYYGFP 75

Query: 247 DKPVLGQFNFIGG--------STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                GQ   +          +T  P F++  +A S  + A++AEI R+G+ ++ RGQ+E
Sbjct: 76  QLLDEGQKFLMASLGMPQLLQTTHIPVFVAATLATSLNSGAYVAEIFRAGIQSIERGQVE 135

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LG+T  +  R ++LPQA + +IPPL ++++ +LK++SL   +G+ +L   G  I  
Sbjct: 136 AARSLGMTEGQTMRYIVLPQAFKRVIPPLGNEFIAMLKDTSLLSVIGYVELTRQGQLISG 195

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            T + ++I      IYL ++  I+  ++ L  ++   +
Sbjct: 196 ATFKPLQIYFGVALIYLIMTFTISRLVDYLERRLKTGD 233



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 40/82 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L+G V T  +    +    I+G + G GRLS  +L +++   YV+ FR  P LV IF 
Sbjct: 10  YLLLGAVQTLKITLVAVSLGCILGLVAGMGRLSRRRLTSFLATCYVDFFRGTPLLVQIFI 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGM 169
           +Y     +L      ++   GM
Sbjct: 70  VYYGFPQLLDEGQKFLMASLGM 91


>gi|139438499|ref|ZP_01772015.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC
           25986]
 gi|133776038|gb|EBA39858.1| Hypothetical protein COLAER_01007 [Collinsella aerofaciens ATCC
           25986]
          Length = 682

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 20/255 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP-----TLTMDTNAKIFVFSFVLGIVLSLF 203
             + L   P        PF        +                 +    F L I + L 
Sbjct: 443 IVAWLDAQPWVAAWNSNPFLGMFCKPQIIVTSIASLFKGWGIALAVTAIGFPLAIPIGLL 502

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                +  H +  + + + YI+  ++ G P  + I + +           F F       
Sbjct: 503 -FAFMKISHSRMLRGIAVTYIN--VLRGTPLFLQIYIAF-----------FGFPMIGLNV 548

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P        L+   +A++AEI R+G+ +VP GQ EAA +LG+T  +    +++PQA+R +
Sbjct: 549 PNLPLGVGVLAINCSAYLAEIFRAGIESVPHGQAEAAYSLGMTWSQVMSRIVVPQAVRYV 608

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP +TS+++ L K++SL  +VG  +L+     +   TG  I   +     YL ++I +  
Sbjct: 609 IPTMTSEFVMLYKDTSLLSSVGVMELMLFSKNLTATTGN-ITPYICAALYYLVVTIPLIH 667

Query: 384 FMNRLNAKIALKEKK 398
            + ++  ++A + K+
Sbjct: 668 IVTKVEHRLAERSKR 682



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 32/84 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G+     +   G   A  IG L    ++S ++++  I   Y+ V R  P  + I+  
Sbjct: 478 LFKGWGIALAVTAIGFPLAIPIGLLFAFMKISHSRMLRGIAVTYINVLRGTPLFLQIYIA 537

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +     +     +  +    + +N
Sbjct: 538 FFGFPMIGLNVPNLPLGVGVLAIN 561


>gi|116492898|ref|YP_804633.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus pentosaceus ATCC 25745]
 gi|116103048|gb|ABJ68191.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Pediococcus pentosaceus ATCC 25745]
          Length = 488

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 19/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +            T+  +    +F F+ G +L+L      R    K  + L   Y+    
Sbjct: 281 IHYWKYFAMGVGYTILISILGVIFGFITGTLLALL-----RLSDNKVLRGLSAAYVEF-- 333

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P +V +   Y              +G     P   +  IA+S  + A++AE++R G
Sbjct: 334 VRGTPLMVQLMFVY------------FGLGLFVNLPALTAGIIAVSLNSGAYVAEVIRGG 381

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  GQ EAA +LGL  R   R V++PQA+++I P L +++++L+K SS+   +G  D
Sbjct: 382 INSVDDGQREAAESLGLNKRDRMRFVIMPQALKNIWPALGNEFISLIKESSIVSIIGVTD 441

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     + + T + +  I++ M +Y  ++  ++  +     K 
Sbjct: 442 LIYQLKIVQSDTYRGVAPIVVAMILYFVMTFSLSRLLKFYERKF 485



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 37/75 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y     +G   T  ++  G+I   I GTL+   RLS NK++  +   YVE  R  P +V 
Sbjct: 283 YWKYFAMGVGYTILISILGVIFGFITGTLLALLRLSDNKVLRGLSAAYVEFVRGTPLMVQ 342

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +   + +P
Sbjct: 343 LMFVYFGLGLFVNLP 357


>gi|254451333|ref|ZP_05064770.1| peptidyl-dipeptidase Dcp protein [Octadecabacter antarcticus 238]
 gi|198265739|gb|EDY90009.1| peptidyl-dipeptidase Dcp protein [Octadecabacter antarcticus 238]
          Length = 960

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 14/259 (5%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
            F  +  ++  +       VL   ++          + +     +  F+    + L L  
Sbjct: 10  DFPYWLLIVLAVGGYFFWRVLTDDLYTQVLQTLSKGIWITVFVTLVGFTLAATMGLGLAL 69

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
              SR       +    LY    ++ G+P +VL+ L         ++  FN+I G+    
Sbjct: 70  MSTSRFI---VVRQTARLYTE--IVRGVPIIVLL-LYVAFVLAPGMVALFNWITGTLGFD 123

Query: 265 E--------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                         IAL+   +AFIAE+ R+GL ++ +GQ+EAA ALGL+  +  R ++ 
Sbjct: 124 PIRNRDFSLLWRAIIALTIGYSAFIAEVFRAGLQSIEKGQIEAAEALGLSPWRRFRHIVF 183

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA R I+PPL + ++ ++K+SSL   +G  D+   G        +  E   +   IYL+
Sbjct: 184 PQAFRRILPPLGNDFIAMVKDSSLVSVLGVLDVTQAGKITAAGNFRYFESYNVLALIYLT 243

Query: 377 LSIMIALFMNRLNAKIALK 395
           ++I ++L + RL   +  K
Sbjct: 244 MTIGLSLGLRRLEHHLREK 262



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T ++   G   A  +G  +     S   +V    R+Y E+ R +P +V++
Sbjct: 39  LQTLSKGIWITVFVTLVGFTLAATMGLGLALMSTSRFIVVRQTARLYTEIVRGVPIIVLL 98

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI------- 198
            ++   +   +    + I    G                    I   +F+  +       
Sbjct: 99  LYVAFVLAPGMVALFNWITGTLGFDPIRNRDFSLLWRAIIALTIGYSAFIAEVFRAGLQS 158

Query: 199 ----------VLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLV 236
                      L L   R  RH  F +   + LP L      +    +LV
Sbjct: 159 IEKGQIEAAEALGLSPWRRFRHIVFPQAFRRILPPLGNDFIAMVKDSSLV 208


>gi|291519683|emb|CBK74904.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens
           16/4]
          Length = 501

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 118/231 (51%), Gaps = 16/231 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA---LPLLYIST 226
           F+++   ++    +     I + + + G+++  F   + R  H+KTG       +  +  
Sbjct: 284 FIDDSRWTYILKGLQNTLLIALCAVLAGMIIG-FVVAIIRVTHDKTGGWGIANAICKLYL 342

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P ++ + + Y + F             +   P+ +   IA +  + A++AEI+R
Sbjct: 343 AIIRGTPIMIQLLIIYYVVF------------AAVNVPKVLVAIIAFAINSGAYVAEIMR 390

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G++++  GQMEA  +LGLT+++    ++LPQA+++++P L +++++L+K +S+   +G 
Sbjct: 391 GGIMSIDDGQMEAGRSLGLTYKQTMISIILPQAIKNVLPALGNEFISLIKETSICGYIGL 450

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL   G  I + T +    ++    +YL +  ++ L + +L   +   E+
Sbjct: 451 MDLTRGGDIIRSITFEPFLPLIGVAIVYLFIVQLLNLAVGKLEKNLRKSER 501



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW-----ICRVYVEVF 136
           D S  T IL G  NT  +A   ++   IIG +V   R++ +K   W     IC++Y+ + 
Sbjct: 286 DDSRWTYILKGLQNTLLIALCAVLAGMIIGFVVAIIRVTHDKTGGWGIANAICKLYLAII 345

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R  P ++ +  +Y  V + + +P 
Sbjct: 346 RGTPIMIQLLIIYYVVFAAVNVPK 369


>gi|326384738|ref|ZP_08206415.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326196546|gb|EGD53743.1| amino acid ABC transporter membrane protein [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 485

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 14/262 (5%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +E  RN   L  I   Y    +    P           +          T+ T   +   
Sbjct: 234 LEKLRNDGTLTAISQKYLKADASGSSPGEPQQQNTWQLVARNLWPMAKATITTTIPLAAV 293

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF +G+V++L    L+R    +    +   YIS  +I G P LV + + +        L 
Sbjct: 294 SFAIGLVIALLV-ALARMADNRVLAWIARAYIS--IIRGTPLLVQLFIIFY------ALP 344

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +  F       P   +  IA S     + AEI+RS +++VP+GQ EAA  +G+++    R
Sbjct: 345 ELGF-----KVPPLPAAAIAFSLNVGGYAAEIIRSAIMSVPKGQSEAAQTIGMSYATTMR 399

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA R  +P L++  ++L+K++SLA  +   +L+ V       T +   + +    
Sbjct: 400 RIILPQAARIAVPGLSNTLISLVKDTSLASTILVTELLRVAQIAAAPTFEFFALYMTAAV 459

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
            Y  + + ++L    L  ++  
Sbjct: 460 YYWIVCLALSLLQGALETRLGR 481



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  LA        +I  LV   R++ N+++AWI R Y+ + R  P LV +F ++ ++
Sbjct: 284 ITTTIPLAAVSFAIGLVIALLVALARMADNRVLAWIARAYISIIRGTPLLVQLFIIFYAL 343

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
             +               LN
Sbjct: 344 PELGFKVPPLPAAAIAFSLN 363


>gi|238852979|ref|ZP_04643378.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|282852417|ref|ZP_06261759.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311111395|ref|ZP_07712792.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus gasseri MV-22]
 gi|238834429|gb|EEQ26667.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri 202-4]
 gi|282556159|gb|EFB61779.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311066549|gb|EFQ46889.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus gasseri MV-22]
          Length = 537

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 17/246 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL---- 207
                     +  +       +  L    +T+       +  F +G+++ +  T      
Sbjct: 277 QPQAGGSKKENWFMSIMHRYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKS 336

Query: 208 -SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             + +  K    +  +YI  F   G P +V  A+ Y   +    L   N           
Sbjct: 337 TGKKWGLKIVDWILAVYIEVF--RGTPMMVQAAVIY---YGIAQLWHLNLNRT------- 384

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  + +S  T A++AE++R G+ A P+GQ EAA A+G+TH +    ++LPQA+R+ +P 
Sbjct: 385 VAALVIVSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPS 444

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +T++++  +K++S+   +  ++L  VG T+ +QT Q  +   I   IYL L+  I    N
Sbjct: 445 ITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFN 504

Query: 387 RLNAKI 392
            +  K+
Sbjct: 505 FIEKKL 510



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y + IL G   T  LA  G I    IG LVG  R               +V WI  VY+
Sbjct: 295 RYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYI 354

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +  +  
Sbjct: 355 EVFRGTPMMVQAAVIYYGIAQLWH 378


>gi|299822124|ref|ZP_07054010.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299815653|gb|EFI82891.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 487

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 18/244 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
                     +   F     +  L     T+       +F  +LG +L+L      +   
Sbjct: 262 YQATANKQMFLEESFFQKYKDYFLKGTLYTILLAIVGVLFGSILGSLLALM-----KLSE 316

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +  +     YI    + G P LV I++ +           F           F+S  IA
Sbjct: 317 TRWLRWPASWYIEF--VRGTPLLVQISIVF-----------FGTQILGLNLSAFLSGCIA 363

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L ++++
Sbjct: 364 LSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTRGTSMRYIILPQAVKNILPALGNEFV 423

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +++K SS+   +G  +L+ V G +   + +    ++I   IY  L+  ++  +     ++
Sbjct: 424 SVIKESSIVSVIGVGELMFVTGVVQGASFKPFIPLVITSLIYFVLTFGLSRLLGVAERRM 483

Query: 393 ALKE 396
              +
Sbjct: 484 KTSD 487



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G + T  LA  G++  +I+G+L+   +LS  + + W    Y+E  R  P LV 
Sbjct: 280 YKDYFLKGTLYTILLAIVGVLFGSILGSLLALMKLSETRWLRWPASWYIEFVRGTPLLVQ 339

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 340 ISIVFFGT 347


>gi|116628764|ref|YP_813936.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus gasseri ATCC 33323]
 gi|116094346|gb|ABJ59498.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus gasseri ATCC 33323]
          Length = 537

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 17/246 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL---- 207
                     +  +       +  L    +T+       +  F +G+++ +  T      
Sbjct: 277 QPQAGGSKKENWFMSIMHRYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKS 336

Query: 208 -SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             + +  K    +  +YI  F   G P +V  A+ Y        L           S   
Sbjct: 337 TGKKWGLKIVDWILAVYIEVF--RGTPMMVQAAVIYYGIAQLWHLN----------SNRT 384

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  + +S  T A++AE++R G+ A P+GQ EAA A+G+TH +    ++LPQA+R+ +P 
Sbjct: 385 VAALVIVSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPS 444

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +T++++  +K++S+   +  ++L  VG T+ +QT Q  +   I   IYL L+  I    N
Sbjct: 445 ITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFN 504

Query: 387 RLNAKI 392
            +  K+
Sbjct: 505 FIEKKL 510



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y + IL G   T  LA  G I    IG LVG  R               +V WI  VY+
Sbjct: 295 RYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYI 354

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           EVFR  P +V    +Y  +  +  +  +  V
Sbjct: 355 EVFRGTPMMVQAAVIYYGIAQLWHLNSNRTV 385


>gi|118473444|ref|YP_889564.1| glutamine ABC transporter permease/substrate-binding protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118174731|gb|ABK75627.1| glutamine ABC transporter, permease/substrate-binding protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 468

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +    +T+         + VLG++  L      R       +A+   Y+  F   G P L
Sbjct: 267 MIGLRMTLILTVVSIAIALVLGVIFGLL-----RVSRSVVLRAIGTTYVDIF--RGTPLL 319

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V     + ++F  P    F             +  I LS    A++ EIVR G+ +V +G
Sbjct: 320 VQ---AFFIYFGIPSALGF-------QMSALTAGIITLSLNAGAYMTEIVRGGIQSVDKG 369

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LG+ +    R V+LPQA+R++IP   +Q++  LK++S+   +G A+L   G  
Sbjct: 370 QMEAARSLGIGYLPTMRKVILPQAIRTMIPSYINQFVITLKDTSILSVIGIAELTQTGRI 429

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           II +  Q+  + LI   IY  + + +    +R+  ++
Sbjct: 430 IIARNFQSFTMWLIIGIIYFVVIMALTKLSDRVEKRL 466



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +++G   T  L    +  A ++G + G  R+S + ++  I   YV++FR  P LV  FF+
Sbjct: 266 LMIGLRMTLILTVVSIAIALVLGVIFGLLRVSRSVVLRAIGTTYVDIFRGTPLLVQAFFI 325

Query: 149 YKSVLSV 155
           Y  + S 
Sbjct: 326 YFGIPSA 332


>gi|146320886|ref|YP_001200597.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           98HAH33]
 gi|145691692|gb|ABP92197.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           98HAH33]
          Length = 734

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 25/256 (9%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVL 200
           ++  +   +  +             G+  NN G  LS   +T+      F  + V+GI+ 
Sbjct: 493 ILNKYFNSTEEASTTTSTVDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIF 552

Query: 201 SLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +FA    +             + +PL+ ++ F+ +G+P L+      Q   +       
Sbjct: 553 GMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFIFWGIPNLIESMTGQQSPIN------- 605

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                     +F++  IALS  + A+IAEIVR G+ AVP GQMEA+ +LG+++    R +
Sbjct: 606 ----------DFVAGTIALSLNSGAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKI 655

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IY
Sbjct: 656 ILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIY 715

Query: 375 LSLSIMIALFMNRLNA 390
           L +  ++     +L  
Sbjct: 716 LVVITLLTRLARKLEK 731



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +     V+V+V R IP ++V  F+
Sbjct: 527 LLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFI 586

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   LS  +            +++  IV        +
Sbjct: 587 FWGIPNLIESMTGQQSPINDFVAGTIALSLNSG-----------AYIAEIVRGGIQAVPA 635

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y +T     LP    I L   ++     L     I    +   F +
Sbjct: 636 G--QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQA 693

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 694 GKIIIARNYQSF 705


>gi|147921223|ref|YP_684965.1| ABC-type glutamate import system, permease component [uncultured
           methanogenic archaeon RC-I]
 gi|110620361|emb|CAJ35639.1| ABC-type glutamate import system, permease component [uncultured
           methanogenic archaeon RC-I]
          Length = 440

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 121/250 (48%), Gaps = 7/250 (2%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +     +   P  +  +  G           T  + T  ++ + +  +G+V+ L    L 
Sbjct: 181 HGQTYMIALTPGKTFSIFDGELFIYSLEKEVTKGLVTTLELSIIAMAIGLVIGLIMG-LG 239

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +  +Y+      G+  L L+     ++F  P L Q +  GGS     F +
Sbjct: 240 RTSTNILFRGIASIYVE-----GIRGLPLLLQLLFVNFGLPFLIQ-DLTGGSFNIDGFTA 293

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS  + A++AEI ++G+ A+ +GQMEAA +LG++H +A   ++LPQA + ++P L 
Sbjct: 294 CIVALSMNSGAYMAEIFKAGIEAIHKGQMEAARSLGMSHYQAMTFIILPQAFKIVLPALG 353

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ L+K+SS+ + +  ++++    T+  +       +L    +YL ++I +   +  +
Sbjct: 354 NEFIALIKDSSIGLVISVSEVLWWSKTVGAEHYNTFTPLLAAGLVYLCITIPLGRIVQYM 413

Query: 389 NAKIALKEKK 398
             K  +  +K
Sbjct: 414 EKKYNVNARK 423



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 37/93 (39%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L+   M    +IG ++G GR S N L   I  +YVE  R +P L+ + F+   
Sbjct: 214 GLVTTLELSIIAMAIGLVIGLIMGLGRTSTNILFRGIASIYVEGIRGLPLLLQLLFVNFG 273

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  ++           G       LS  +    
Sbjct: 274 LPFLIQDLTGGSFNIDGFTACIVALSMNSGAYM 306


>gi|253755502|ref|YP_003028642.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|251817966|emb|CAZ55746.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis BM407]
          Length = 732

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 25/256 (9%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVL 200
           ++  +   +  +             G+  NN G  LS   +T+      F  + V+GI+ 
Sbjct: 491 ILNKYFNSTEEASTTTSTVDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIF 550

Query: 201 SLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +FA    +             + +PL+ ++ F+ +G+P L+      Q   +       
Sbjct: 551 GMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFIFWGIPNLIESMTGQQSPIN------- 603

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                     +F++  IALS  ++A+IAEIVR G+ AVP GQMEA+ +LG+++    R +
Sbjct: 604 ----------DFVAGTIALSLNSSAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKI 653

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IY
Sbjct: 654 ILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIY 713

Query: 375 LSLSIMIALFMNRLNA 390
           L +  ++     +L  
Sbjct: 714 LVVITLLTRLARKLEK 729



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +     V+V+V R IP ++V  F+
Sbjct: 525 LLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFI 584

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   LS  +            +++  IV        +
Sbjct: 585 FWGIPNLIESMTGQQSPINDFVAGTIALSLNSS-----------AYIAEIVRGGIQAVPA 633

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y +T     LP    I L   ++     L     I    +   F +
Sbjct: 634 G--QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQA 691

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 692 GKIIIARNYQSF 703


>gi|253751794|ref|YP_003024935.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis SC84]
 gi|253753617|ref|YP_003026758.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|251816083|emb|CAZ51704.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis SC84]
 gi|251819863|emb|CAR45878.1| putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Streptococcus suis P1/7]
 gi|319758142|gb|ADV70084.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           JS14]
          Length = 732

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 25/256 (9%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVL 200
           ++  +   +  +             G+  NN G  LS   +T+      F  + V+GI+ 
Sbjct: 491 ILNKYFNSTEEASTTTSTVDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIF 550

Query: 201 SLFATRLSRHFHE------KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +FA    +             + +PL+ ++ F+ +G+P L+      Q   +       
Sbjct: 551 GMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFIFWGIPNLIESMTGQQSPIN------- 603

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                     +F++  IALS  + A+IAEIVR G+ AVP GQMEA+ +LG+++    R +
Sbjct: 604 ----------DFVAGTIALSLNSGAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKI 653

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IY
Sbjct: 654 ILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIY 713

Query: 375 LSLSIMIALFMNRLNA 390
           L +  ++     +L  
Sbjct: 714 LVVITLLTRLARKLEK 729



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +     V+V+V R IP ++V  F+
Sbjct: 525 LLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFI 584

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   LS  +            +++  IV        +
Sbjct: 585 FWGIPNLIESMTGQQSPINDFVAGTIALSLNSG-----------AYIAEIVRGGIQAVPA 633

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y +T     LP    I L   ++     L     I    +   F +
Sbjct: 634 G--QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQA 691

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 692 GKIIIARNYQSF 703


>gi|257887162|ref|ZP_05666815.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257898269|ref|ZP_05677922.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|257823216|gb|EEV50148.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257836181|gb|EEV61255.1| amino acid ABC transporter [Enterococcus faecium Com15]
          Length = 535

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 331 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTVASIYVD--IIRG 383

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 384 IPMMV---LAFFIFFGLPGIVGFTI-------PDFIAGVITLTLNASAYIAEIVRGGINA 433

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 434 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 493

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 494 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 535



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  +  +YV++ R IP +
Sbjct: 328 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMM 387

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 388 VLAFFIFFGLP 398


>gi|300362597|ref|ZP_07058773.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300353588|gb|EFJ69460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 537

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 17/246 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL---- 207
                     +  +       +  L    +T+       +  F +G+++ +  T      
Sbjct: 277 QPQAGSSKKENWFMSIMHRYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKS 336

Query: 208 -SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             + +  K    +  +YI  F   G P +V  A+ Y   +    L   N           
Sbjct: 337 TGKKWGLKIVDWILAVYIEVF--RGTPMMVQAAVIY---YGIAQLWHLNLNRT------- 384

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  + +S  T A++AE++R G+ A P+GQ EAA A+G+TH +    ++LPQA+R+ +P 
Sbjct: 385 VAALVIVSINTGAYLAEVIRGGINATPKGQFEAASAIGMTHSQQMWHIILPQAIRNCLPS 444

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +T++++  +K++S+   +  ++L  VG T+ +QT Q  +   I   IYL L+  I    N
Sbjct: 445 ITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISMIYLILTFSITRIFN 504

Query: 387 RLNAKI 392
            +  K+
Sbjct: 505 FIEKKL 510



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y + IL G   T  LA  G I    IG LVG  R               +V WI  VY+
Sbjct: 295 RYGSMILGGVGMTLLLALVGTIVGFFIGLLVGIVRTIPTPKSTGKKWGLKIVDWILAVYI 354

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +  +  
Sbjct: 355 EVFRGTPMMVQAAVIYYGIAQLWH 378


>gi|269123376|ref|YP_003305953.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptobacillus moniliformis DSM 12112]
 gi|268314702|gb|ACZ01076.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptobacillus moniliformis DSM 12112]
          Length = 510

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 15/241 (6%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           P    S +  F +      L     T++ +     F F++G++LSL     + +      
Sbjct: 270 PNNFLSWIKYFIVNYWKDFLYGTLTTVNLSLIGTFFGFIIGLILSLLRDERNVNKKSWLS 329

Query: 217 KALPLLY-----ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +  ++     I    I G P +V   + Y           F+ I G  + P   S  I
Sbjct: 330 IVIYNIFKYFVSIYVTFIRGTPMIVQAIIFYY---------GFSQITGINI-PALTSALI 379

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +S  T A+I EIVR G+ ++ +GQ EAA ALG+ H    R V+LPQA+R+++P + +++
Sbjct: 380 IVSYNTGAYITEIVRGGIDSIEKGQYEAAQALGMNHFNIMRKVILPQAIRNVLPSVANEF 439

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  +K++S+  ++G  +L +   +I+    +  E+ +I   IY  L+  ++        K
Sbjct: 440 IINIKDTSVLFSIGVTELFTTSKSIVGSHVRYYEVFVITCAIYFVLTYSLSKLFRYFEKK 499

Query: 392 I 392
           +
Sbjct: 500 M 500



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 12/84 (14%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KL-------VAWICRV 131
           +Y    L G + T  L+  G     IIG ++   R   N      L         +   +
Sbjct: 283 NYWKDFLYGTLTTVNLSLIGTFFGFIIGLILSLLRDERNVNKKSWLSIVIYNIFKYFVSI 342

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSV 155
           YV   R  P +V     Y     +
Sbjct: 343 YVTFIRGTPMIVQAIIFYYGFSQI 366


>gi|257895699|ref|ZP_05675352.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257832264|gb|EEV58685.1| amino acid ABC transporter [Enterococcus faecium Com12]
          Length = 535

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+      F  + V+G++  LF+    R       + +  +Y+   +I G
Sbjct: 331 YQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIR-----ALRTVASIYVD--IIRG 383

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + + F  P +  F         P+F++  I L+   +A+IAEIVR G+ A
Sbjct: 384 IPMMV---LAFFIFFGLPGIVGFTI-------PDFIAGVITLTLNASAYIAEIVRGGINA 433

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+ 
Sbjct: 434 VPVGQMEASRSLGLSYNRTMQKIILPQAIRIMIPSFVNQFVISLKDTTIISAIGVVELLQ 493

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T Q+  + LI   +YL L   +      L  K+ 
Sbjct: 494 TGKIIVARTTQSTYVYLIIAIMYLILITALTKLAKVLEKKVK 535



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 34/71 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A+L G   T  L       A +IG + G   ++  + +  +  +YV++ R IP +
Sbjct: 328 QNNYQALLKGLWRTILLTLISFALAIVIGVIFGLFSVAPIRALRTVASIYVDIIRGIPMM 387

Query: 143 VVIFFLYKSVL 153
           V+ FF++  + 
Sbjct: 388 VLAFFIFFGLP 398


>gi|295398454|ref|ZP_06808493.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
 gi|294973318|gb|EFG49106.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
          Length = 514

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 15/224 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                 +    + T   I   S   G++L +F   L R  +    K L   YI    + G
Sbjct: 304 WTTYWPYFWDGIKTTLIIAGVSIFFGMILGIFL-ALMRLTNNPVLKFLATAYIEF--VRG 360

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P ++ +               F  +G         +  +++S  + A+IAEI+R G+ +
Sbjct: 361 TPLMIQVLFM------------FLGVGSIFGWSTMTAGLVSVSMNSGAYIAEIIRGGIQS 408

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ EAA +LGL + +  R V+ PQ++RSI P L ++++ L+K SS+   +G A+L  
Sbjct: 409 VDKGQAEAARSLGLGYWQTMRKVIFPQSLRSIWPSLGNEFITLIKESSIVSTIGVAELTF 468

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               + + T QA+  + I M IY  ++  ++  +N    K+  K
Sbjct: 469 QTRAVTSITYQAVVPLFISMIIYFIMTYALSQVLNVYERKMNQK 512



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 40/94 (42%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
              A F+I  G    T  ++Y      G   T  +A   +    I+G  +   RL+ N +
Sbjct: 287 WTEASFDIIAGENAGTGWTTYWPYFWDGIKTTLIIAGVSIFFGMILGIFLALMRLTNNPV 346

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           + ++   Y+E  R  P ++ + F++  V S+   
Sbjct: 347 LKFLATAYIEFVRGTPLMIQVLFMFLGVGSIFGW 380


>gi|223932270|ref|ZP_03624273.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|223898951|gb|EEF65309.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
          Length = 732

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 122/250 (48%), Gaps = 13/250 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVL 200
           ++  +   +  +             G+  NN G  LS   +T+      F  + V+GI+ 
Sbjct: 491 ILNKYFNSTEEASTTTSTVDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIF 550

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +FA         K  +    +++   ++ G+P +++ A  +      P L + +  G  
Sbjct: 551 GMFA-----VSPVKALRVTSSVFVD--VVRGIPLMIVAAFIFW---GIPNLIE-SITGQQ 599

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           +   +F++  IALS  + A+IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA 
Sbjct: 600 SPINDFVAGTIALSLNSGAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAG 659

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  +
Sbjct: 660 KIMLPNFINQFVITLKDTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYLVVITL 719

Query: 381 IALFMNRLNA 390
           +     +L  
Sbjct: 720 LTRLARKLEK 729



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +     V+V+V R IP ++V  F+
Sbjct: 525 LLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFI 584

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   LS  +            +++  IV        +
Sbjct: 585 FWGIPNLIESITGQQSPINDFVAGTIALSLNSG-----------AYIAEIVRGGIQAVPA 633

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y +T     LP    I L   ++     L     I    +   F +
Sbjct: 634 G--QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQA 691

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 692 GKIIIARNYQSF 703


>gi|15893407|ref|NP_346756.1| glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum ATCC 824]
 gi|15022937|gb|AAK78096.1|AE007524_1 Glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum ATCC 824]
          Length = 477

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 107/209 (51%), Gaps = 11/209 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LIFGLPTLVLIALKYQLH 245
             + +F  V+ ++++LF   +   F   T K L  L      +I G P LV     + + 
Sbjct: 279 LGMTLFITVIAMIIALFIGAIFGFFSISTSKVLNTLARWFVDIIRGTPLLVQ---AFFIF 335

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P L               ++  IA+S    A+++EI R G++++ +GQMEAA +LG+
Sbjct: 336 FGIPGLSGLKI-------NPVVAGIIAVSLNAGAYMSEIFRGGILSINQGQMEAARSLGI 388

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +R A   ++ PQA++ +IP + +Q++  LK++S+   +G  +L + G  II  T +A +
Sbjct: 389 PYRTAMLKIVFPQAVKVMIPSIVNQFIISLKDTSILSVIGIQELTNTGQIIIGATFKAFQ 448

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I LI   +Y  +  ++++   ++   + +
Sbjct: 449 IWLIVAIMYFIVIKLLSILSRKIERYVKI 477



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 36/70 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA  +L G   T ++    MI A  IG + G   +S +K++  + R +V++ R  P LV
Sbjct: 270 QYAPQLLKGLGMTLFITVIAMIIALFIGAIFGFFSISTSKVLNTLARWFVDIIRGTPLLV 329

Query: 144 VIFFLYKSVL 153
             FF++  + 
Sbjct: 330 QAFFIFFGIP 339


>gi|73662246|ref|YP_301027.1| truncated ABC-type amino acid transport system periplasmic
           component [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494761|dbj|BAE18082.1| truncated ABC-type amino acid transport system periplasmic
           component [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 398

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 13/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I +   +LG V       L +    K    L   YI    + G P LV + L Y   F
Sbjct: 202 ILISIVGVLLGTVFG-AGIALLKLSKIKLLSWLASAYIEF--LRGTPLLVQVFLVY---F 255

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +   N           +   IAL    +A+IAEI+R+G+ AV  GQ EAA +LGLT
Sbjct: 256 GTTAVLGLNI-------SALICGMIALVINCSAYIAEIIRAGINAVDSGQTEAARSLGLT 308

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  + V+LPQA+++I+P L ++++ ++K SS+   +G ++++     +   +      
Sbjct: 309 YGQTMKSVILPQAIKNILPALGNEFVTVIKESSIVSVIGVSEIMFNAQVVQGASFDPFTP 368

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++   +Y  L+  ++  M     ++ + +
Sbjct: 369 LIVAAILYFILTFTLSRVMYYFEGRMKVSD 398



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 36/71 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G  NT  ++  G++  T+ G  +   +LS  KL++W+   Y+E  R  P LV 
Sbjct: 190 YGNFFLKGIQNTILISIVGVLLGTVFGAGIALLKLSKIKLLSWLASAYIEFLRGTPLLVQ 249

Query: 145 IFFLYKSVLSV 155
           +F +Y    +V
Sbjct: 250 VFLVYFGTTAV 260


>gi|302023820|ref|ZP_07249031.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis 05HAS68]
          Length = 643

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 122/250 (48%), Gaps = 13/250 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVL 200
           ++  +   +  +             G+  NN G  LS   +T+      F  + V+GI+ 
Sbjct: 402 ILNKYFNSTEEASTTTSTVDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIF 461

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +FA         K  +    +++   ++ G+P +++ A  +      P L + +  G  
Sbjct: 462 GMFA-----VSPVKALRVTSSVFVD--VVRGIPLMIVAAFIFW---GIPNLIE-SITGQQ 510

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           +   +F++  IALS  + A+IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA 
Sbjct: 511 SPINDFVAGTIALSLNSGAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAG 570

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  +
Sbjct: 571 KIMLPNFINQFVITLKDTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYLVVITL 630

Query: 381 IALFMNRLNA 390
           +     +L  
Sbjct: 631 LTRLARKLEK 640



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +     V+V+V R IP ++V  F+
Sbjct: 436 LLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFI 495

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   LS  +            +++  IV        +
Sbjct: 496 FWGIPNLIESITGQQSPINDFVAGTIALSLNSG-----------AYIAEIVRGGIQAVPA 544

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y +T     LP    I L   ++     L     I    +   F +
Sbjct: 545 G--QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQA 602

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 603 GKIIIARNYQSF 614


>gi|229824368|ref|ZP_04450437.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271]
 gi|229786168|gb|EEP22282.1| hypothetical protein GCWU000282_01689 [Catonella morbi ATCC 51271]
          Length = 535

 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP---LLYISTFL 228
             + L+   +T+  +    +   ++G+ + +  T          G       LL     +
Sbjct: 299 WRQYLAGTGMTLWVSLTGTLIGLLIGLAVGIIRTIPKSKSQIHNGVLKVANLLLNAYIAI 358

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y            + + G  ++P   + ++ +S  T A+IAE+VR G
Sbjct: 359 FRGTPMIVQAMIFYY---------GTDLLWGWKLTP-MSAAFLVVSINTGAYIAEVVRGG 408

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+ +GQ EAA A+G+ H +  + V++PQ  R+I+P + ++++  +K++S+   +  ++
Sbjct: 409 IYAIDKGQFEAARAIGMNHWQTMKEVVMPQVFRTILPSVGNEFVINVKDTSVLNVISVSE 468

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L     TI     +  E   +   IY  L+  I   +  +  +I
Sbjct: 469 LYFTTKTIAGNNFRYFETFFVTAVIYFILTFTITSLLRAIEKRI 512



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 10/94 (10%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T W++ +G +   +IG  VG  R              K+   +   Y+ +
Sbjct: 299 WRQYLAGTGMTLWVSLTGTLIGLLIGLAVGIIRTIPKSKSQIHNGVLKVANLLLNAYIAI 358

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           FR  P +V     Y     +       +   F +
Sbjct: 359 FRGTPMIVQAMIFYYGTDLLWGWKLTPMSAAFLV 392


>gi|330832852|ref|YP_004401677.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|329307075|gb|AEB81491.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 732

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 122/250 (48%), Gaps = 13/250 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG--LSFPTLTMDTNAKIFVFSFVLGIVL 200
           ++  +   +  +             G+  NN G  LS   +T+      F  + V+GI+ 
Sbjct: 491 ILNKYFNSTEEASTTTSTVDETTIVGLLKNNYGQLLSGLGITIGLALLSFAIAIVIGIIF 550

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +FA         K  +    +++   ++ G+P +++ A  +      P L + +  G  
Sbjct: 551 GMFA-----VSPVKALRVTSSVFVD--VVRGIPLMIVAAFIFW---GIPNLIE-SITGQQ 599

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           +   +F++  IALS  + A+IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA 
Sbjct: 600 SPINDFVAGTIALSLNSGAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAG 659

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  +
Sbjct: 660 KIMLPNFINQFVITLKDTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYLVVITL 719

Query: 381 IALFMNRLNA 390
           +     +L  
Sbjct: 720 LTRLARKLEK 729



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +     V+V+V R IP ++V  F+
Sbjct: 525 LLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFI 584

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + +++                   LS  +            +++  IV        +
Sbjct: 585 FWGIPNLIESITGQQSPINDFVAGTIALSLNSG-----------AYIAEIVRGGIQAVPA 633

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                +  ++L + Y +T     LP    I L   ++     L     I    +   F +
Sbjct: 634 G--QMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIGLVELFQA 691

Query: 269 LYIALSCYTAAF 280
             I ++    +F
Sbjct: 692 GKIIIARNYQSF 703


>gi|317506835|ref|ZP_07964608.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
 gi|316254871|gb|EFV14168.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
          Length = 473

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 14/248 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +    L     P  + +      +                 +    FVLG+V+++  T L
Sbjct: 231 ISAKYLRPEQAPAAARLPSQWETVAANLWPMAKALARVTLPLAAICFVLGLVIAVL-TAL 289

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R    +   AL   Y+S  +I G P LV + L Y           F         P F 
Sbjct: 290 ARISRNRAVSALARSYVS--VIRGTPLLVQLFLIY-----------FALPEFGVKLPPFP 336

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +ALS    A+ +E+VR+ ++AVP GQ EAA ALG +  +  RLV+ PQA +  +PPL
Sbjct: 337 SAVVALSLSVGAYASEVVRAAILAVPSGQSEAARALGFSRGQTLRLVVFPQAAKIAVPPL 396

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++  + L+K++SLA  +   +L            +   +       Y  + ++++ F  R
Sbjct: 397 SNTLIALVKDTSLAATIQVTELFRTAQIAAAPIFRYFALYATAAVFYWVVCLVLSWFQGR 456

Query: 388 LNAKIALK 395
           L  ++   
Sbjct: 457 LERRLERG 464



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA    +   +I  L    R+S N+ V+ + R YV V R  P LV +F +Y ++   
Sbjct: 269 TLPLAAICFVLGLVIAVLTALARISRNRAVSALARSYVSVIRGTPLLVQLFLIYFALPEF 328

Query: 156 LPIPDHSIV 164
                    
Sbjct: 329 GVKLPPFPS 337


>gi|261404062|ref|YP_003240303.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261280525|gb|ACX62496.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 482

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                  F+F LG++         +    +  + +  +++  F   G+P LV   L + +
Sbjct: 289 LTIVSLFFAFFLGLIFGFM-----KVGRNRWLRGIATVFVDIF--RGIPLLV---LAFFI 338

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P    F            ++  + LS    A++ EI+R G+ ++  GQ+EAA +LG
Sbjct: 339 YFGIPQAFGFT-------MSPIVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQLEAARSLG 391

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L +RKA   +++PQA++ +IP   +Q +  LK++S+   +G  +L   G  II +T  + 
Sbjct: 392 LPYRKAMMKIIIPQAIKVMIPTFINQLVITLKDTSILSVIGLVELTQSGKIIIARTFASF 451

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +I L+   +YL +  ++    +RL  K+ 
Sbjct: 452 DIWLVVAIMYLVVITILTKISDRLERKVR 480



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT  L    +  A  +G + G  ++  N+ +  I  V+V++FR IP LV+ FF+
Sbjct: 279 LLKGLGNTLLLTIVSLFFAFFLGLIFGFMKVGRNRWLRGIATVFVDIFRGIPLLVLAFFI 338

Query: 149 YKSVLSVLPI 158
           Y  +      
Sbjct: 339 YFGIPQAFGF 348


>gi|116873682|ref|YP_850463.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742560|emb|CAK21684.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 486

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQEEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T R + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQRASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|329666485|gb|AEB92433.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 537

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++    K           +  +       +  L    +T+       +  F +G+++ + 
Sbjct: 269 LMAQAVKEQPQAGGSKKENWFMSIMRRYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIV 328

Query: 204 ATRL-----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            T        + +  K    L  +YI  F   G P +V  A+ Y   +    L   N   
Sbjct: 329 RTIPTPKSTGKRWGLKIVNWLLAVYIEVF--RGTPMMVQAAVIY---YGIAQLWHLNLNR 383

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                   ++  + +S  T A++AE++R G+ A P+GQ EAA ALG+TH +    ++LPQ
Sbjct: 384 T-------VAALVIVSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQ 436

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT +  +   I   IYL L+
Sbjct: 437 AIRNSLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILT 496

Query: 379 IMIALFMNRLNAKI 392
             I    N +  K+
Sbjct: 497 FSITRIFNFIEKKL 510



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y + IL G   T  LA  G I    IG LVG  R               +V W+  VY+
Sbjct: 295 RYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYI 354

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +  +  
Sbjct: 355 EVFRGTPMMVQAAVIYYGIAQLWH 378


>gi|301066392|ref|YP_003788415.1| amino acid ABC transporter permease/periplasmic protein
           [Lactobacillus casei str. Zhang]
 gi|300438799|gb|ADK18565.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei str. Zhang]
          Length = 485

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 19/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L     T+  +A    F  +LG + +L      R    K    + + YI    
Sbjct: 277 IHYWTYFLKGVEYTLLISAIGAFFGVLLGTIFALL-----RLSKNKLSHLIGVSYIEF-- 329

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ +   Y              IG     P  ++  IA+S  +AA++AEI+RSG
Sbjct: 330 VRGTPLMIQVMFVY------------FGIGIFIDIPALIAGLIAVSLNSAAYVAEIIRSG 377

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P GQ EAA +LGL+ R+    V+LPQA+++I P L +++++L+K SS+   +G  D
Sbjct: 378 IDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNIWPALGNEFISLIKESSIVSIIGVTD 437

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     +   T + ++ IL+ M +Y  L+  ++  ++    K+
Sbjct: 438 LIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSKLLSHFERKM 481



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T  L G   T  ++  G     ++GT+    RLS NKL   I   Y+E  R  P ++ 
Sbjct: 279 YWTYFLKGVEYTLLISAIGAFFGVLLGTIFALLRLSKNKLSHLIGVSYIEFVRGTPLMIQ 338

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +   + IP
Sbjct: 339 VMFVYFGIGIFIDIP 353


>gi|170719628|ref|YP_001747316.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169757631|gb|ACA70947.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 320

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEIVR+G+ ++ +GQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNASQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL +++ ++   +RL  ++A  +
Sbjct: 285 FSTFEIWFCVAGLYLLINLPLSHLASRLERRLAQSD 320



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T W++        +IG   G  RLS N  +  +  VYVE+ R  P LV IF  Y  
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 152 V 152
           +
Sbjct: 181 I 181


>gi|260769396|ref|ZP_05878329.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260614734|gb|EEX39920.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
          Length = 314

 Score =  176 bits (446), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 19/256 (7%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P V+  + +  V     I     V     +          +T++ +    +F+ +LG++ 
Sbjct: 78  PQVIEHYTHLLVGEGDLIFQGDTVAQLNEWKFGPIAHGLWVTIEISFISLIFAVLLGLIF 137

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L      R    +T + L L Y+   LI G P LV I + Y             FIG  
Sbjct: 138 GLM-----RVAKNQTARNLALTYVE--LIRGTPLLVQIFIVY------------FFIGTV 178

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  +ALS +T A++AEIVR+G+ A+P GQMEAA +LG+T+ KA R V+LPQA+
Sbjct: 179 LDFDRFTAGVVALSVFTGAYVAEIVRAGIQAIPNGQMEAARSLGMTYPKAMRYVILPQAL 238

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +  +PPL  Q++NL+K+SSL   +   DL   G  +++ +    E+      +YL ++  
Sbjct: 239 KRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTVAALYLLVTGT 298

Query: 381 IALFMNRLNAKIALKE 396
           ++  + RL  +++  +
Sbjct: 299 LSWAIQRLEKRLSASD 314



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++F  +I A ++G + G  R++ N+    +   YVE+ R  P LV IF +Y  
Sbjct: 115 GLWVTIEISFISLIFAVLLGLIFGLMRVAKNQTARNLALTYVELIRGTPLLVQIFIVYFF 174

Query: 152 V 152
           +
Sbjct: 175 I 175


>gi|77456604|ref|YP_346109.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380607|gb|ABA72120.1| amino acid ABC transporter membrane protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 319

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   + V S VLG+++ L AT L R     T + L  +Y+   L+ G P LV I +
Sbjct: 119 WGLWTTLWLSVVSGVLGLLIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGTPLLVQIFI 175

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   ALS +T A++AEI+RSG+ ++ RGQ EAA
Sbjct: 176 FY------------FFIGTVMNLSREFAGIAALSLFTGAYVAEIIRSGVQSIARGQNEAA 223

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L+  G  +I  +
Sbjct: 224 RSLGLSAGQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTS 283

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI+     +YL +++ ++   +RL  ++A  +
Sbjct: 284 FSPFEILFCVAGLYLLINLPLSKIASRLERRLAQSD 319



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 35/68 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T WL+    +   +IG   G  RLS+N  +  +  +YVE+ R  P LV IF  
Sbjct: 117 LLWGLWTTLWLSVVSGVLGLLIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 176

Query: 149 YKSVLSVL 156
           Y  + +V+
Sbjct: 177 YFFIGTVM 184


>gi|191638338|ref|YP_001987504.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus casei BL23]
 gi|227535173|ref|ZP_03965222.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239631577|ref|ZP_04674608.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|190712640|emb|CAQ66646.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus casei BL23]
 gi|227187218|gb|EEI67285.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239526042|gb|EEQ65043.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382365|gb|AEA53841.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus casei LC2W]
 gi|327385566|gb|AEA57040.1| Amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus casei BD-II]
          Length = 485

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 19/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L     T+  +A    F  +LG + +L      R    K    + + YI    
Sbjct: 277 IHYWTYFLKGVEYTLLISAIGAFFGVLLGTIFALL-----RLSKNKLSHLIGVSYIEF-- 329

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ +   Y              IG     P  ++  IA+S  +AA++AEI+RSG
Sbjct: 330 VRGTPLMIQVMFVY------------FGIGIFIDIPALIAGLIAVSLNSAAYVAEIIRSG 377

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P GQ EAA +LGL+ R+    V+LPQA+++I P L +++++L+K SS+   +G  D
Sbjct: 378 IDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNIWPALGNEFISLIKESSIVSIIGVTD 437

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     +   T + ++ IL+ M +Y  L+  ++  ++    K+
Sbjct: 438 LIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSKLLSHFERKM 481



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T  L G   T  ++  G     ++GT+    RLS NKL   I   Y+E  R  P ++ 
Sbjct: 279 YWTYFLKGVEYTLLISAIGAFFGVLLGTIFALLRLSKNKLSHLIGVSYIEFVRGTPLMIQ 338

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +   + IP
Sbjct: 339 VMFVYFGIGIFIDIP 353


>gi|329927997|ref|ZP_08282001.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
 gi|328938101|gb|EGG34498.1| ABC transporter, permease protein [Paenibacillus sp. HGF5]
          Length = 482

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                  F+F LG++         +    +  + +  +++  F   G+P LV   L + +
Sbjct: 289 LTIVSLFFAFFLGLIFGFM-----KVGRNRWLRGIATVFVDIF--RGIPLLV---LAFFI 338

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P    F            ++  + LS    A++ EI+R G+ ++  GQ+EAA +LG
Sbjct: 339 YFGIPQAFGFT-------MSPIVAAVLTLSLNAGAYVTEIIRGGIQSIDPGQLEAARSLG 391

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L +RKA   +++PQA++ +IP   +Q +  LK++S+   +G  +L   G  II +T  + 
Sbjct: 392 LPYRKAMMKIIIPQAIKVMIPTFINQLVITLKDTSILSVIGLVELTQSGKIIIARTFASF 451

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +I L+   +YL +  ++    +RL  K+ 
Sbjct: 452 DIWLVVAIMYLVVITILTKISDRLERKVR 480



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT  L    +  A  +G + G  ++  N+ +  I  V+V++FR IP LV+ FF+
Sbjct: 279 LLKGLGNTLLLTIVSLFFAFFLGLIFGFMKVGRNRWLRGIATVFVDIFRGIPLLVLAFFI 338

Query: 149 YKSVLSVLPI 158
           Y  +      
Sbjct: 339 YFGIPQAFGF 348


>gi|258611866|ref|ZP_05711691.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria
           monocytogenes FSL R2-503]
 gi|258606739|gb|EEW19347.1| LOW QUALITY PROTEIN: amino acid ABC transporter [Listeria
           monocytogenes FSL R2-503]
          Length = 444

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 213 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 270

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 271 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 317

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 318 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 377

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 378 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 437

Query: 390 AKIALKE 396
            ++   +
Sbjct: 438 RRMRTSD 444



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 237 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 296

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 297 IFIVFFGT 304


>gi|297192145|ref|ZP_06909543.1| polar amino acid ABC transporter [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|197720209|gb|EDY64117.1| polar amino acid ABC transporter [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 326

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 69/217 (31%), Positives = 108/217 (49%), Gaps = 5/217 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI V+S V+G+VL      + R        ++   YI  F   G P LV I L + 
Sbjct: 85  WETLKITVYSMVIGVVLGAIL-AVMRLSPNPVLSSVAWGYIWFF--RGTPVLVQILLWFN 141

Query: 244 LHFDKPVLGQFNFIGG--STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           L      L          + V   F++  +AL    AA++AEI R+G+ +V  GQ EAA 
Sbjct: 142 LSLVFQYLDLGFIYRDEMNQVMTPFVAALLALGLNEAAYMAEICRAGIQSVDSGQTEAAH 201

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALG+   +  R ++LPQAMR IIPP  ++++N+LK SSLA A+G+ +L   G    ++T 
Sbjct: 202 ALGMKGGRTMRRIVLPQAMRVIIPPTGNEFINMLKTSSLAFAIGYGELFLRGREFGSRTL 261

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +E  ++    YL+L+ + ++    L    A    +
Sbjct: 262 AIMEGYIVISLWYLALTTVFSIGQYYLERYYARGSSR 298



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T  +    M+   ++G ++   RLS N +++ +   Y+  FR  P LV I   
Sbjct: 80  FARGAWETLKITVYSMVIGVVLGAILAVMRLSPNPVLSSVAWGYIWFFRGTPVLVQILLW 139

Query: 149 YKSVL 153
           +   L
Sbjct: 140 FNLSL 144


>gi|325507519|gb|ADZ19155.1| Glutamine-binding periplasmic protein fused to glutamine permease
           [Clostridium acetobutylicum EA 2018]
          Length = 489

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 107/209 (51%), Gaps = 11/209 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LIFGLPTLVLIALKYQLH 245
             + +F  V+ ++++LF   +   F   T K L  L      +I G P LV     + + 
Sbjct: 291 LGMTLFITVIAMIIALFIGAIFGFFSISTSKVLNTLARWFVDIIRGTPLLVQ---AFFIF 347

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P L               ++  IA+S    A+++EI R G++++ +GQMEAA +LG+
Sbjct: 348 FGIPGLSGLKI-------NPVVAGIIAVSLNAGAYMSEIFRGGILSINQGQMEAARSLGI 400

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +R A   ++ PQA++ +IP + +Q++  LK++S+   +G  +L + G  II  T +A +
Sbjct: 401 PYRTAMLKIVFPQAVKVMIPSIVNQFIISLKDTSILSVIGIQELTNTGQIIIGATFKAFQ 460

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I LI   +Y  +  ++++   ++   + +
Sbjct: 461 IWLIVAIMYFIVIKLLSILSRKIERYVKI 489



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 36/70 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA  +L G   T ++    MI A  IG + G   +S +K++  + R +V++ R  P LV
Sbjct: 282 QYAPQLLKGLGMTLFITVIAMIIALFIGAIFGFFSISTSKVLNTLARWFVDIIRGTPLLV 341

Query: 144 VIFFLYKSVL 153
             FF++  + 
Sbjct: 342 QAFFIFFGIP 351


>gi|227889073|ref|ZP_04006878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227850302|gb|EEJ60388.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 537

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++    K           +  +       +  L    +T+       +  F +G+++ + 
Sbjct: 269 LMAQAVKEQPQTGGSKKENWFMSIMRRYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIV 328

Query: 204 ATRL-----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            T        + +  K    L  +YI  F   G P +V  A+ Y   +    L   N   
Sbjct: 329 RTIPTPKSTGKRWGLKIVNWLLAVYIEVF--RGTPMMVQAAVIY---YGIAQLWHLNLNR 383

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                   ++  + +S  T A++AE++R G+ A P+GQ EAA ALG+TH +    ++LPQ
Sbjct: 384 T-------VAALVIVSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQ 436

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT +  +   I   IYL L+
Sbjct: 437 AIRNSLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILT 496

Query: 379 IMIALFMNRLNAKI 392
             I    N +  K+
Sbjct: 497 FSITRVFNFIERKL 510



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y + IL G   T  LA  G I    IG LVG  R               +V W+  VY+
Sbjct: 295 RYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYI 354

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +  +  
Sbjct: 355 EVFRGTPMMVQAAVIYYGIAQLWH 378


>gi|312868037|ref|ZP_07728241.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096441|gb|EFQ54681.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 520

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 13/223 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY---ISTFLI 229
            + L    +T+  +    +   V+G+++ +F T          G      +   +   + 
Sbjct: 290 PQFLRGTGMTLLISMTGTIAGLVIGLLIGVFRTAPKAKNKFLAGCQTAFGWFLNVYIEIF 349

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V   + +           FN     T      +    +S  T A+++EIVR G+
Sbjct: 350 RGTPMIVQSMVIFYGSAQA-----FNISLDRT-----WAAIFIVSINTGAYMSEIVRGGI 399

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AV  GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++  +K++S+   +   +L
Sbjct: 400 LAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVEL 459

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G T+  Q  Q      I   IY  L+  I   +  +  ++
Sbjct: 460 YFTGNTVATQNYQYFPTFTIIAVIYFILTFTITRILRYIERRL 502



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 10/78 (12%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVEVFRN 138
            L G   T  ++ +G I   +IG L+G  R +                W   VY+E+FR 
Sbjct: 292 FLRGTGMTLLISMTGTIAGLVIGLLIGVFRTAPKAKNKFLAGCQTAFGWFLNVYIEIFRG 351

Query: 139 IPPLVVIFFLYKSVLSVL 156
            P +V    ++       
Sbjct: 352 TPMIVQSMVIFYGSAQAF 369


>gi|304405143|ref|ZP_07386803.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304346022|gb|EFM11856.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 495

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 17/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +  FV G +LSLF     +    +  +    +Y S F   G P L+ + + Y   +
Sbjct: 303 LVSALLGFVWGSILSLF-----KISSVRPLQWFATVYTSVF--RGTPLLLQLFIIY---Y 352

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L  ++        P  ++  +A    +AA+++E +R G++AV RGQ EAA+ALG+ 
Sbjct: 353 ATPQLFDYDI-------PALLAAGLAFGLNSAAYLSETIRGGIMAVDRGQREAAMALGIP 405

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R   R ++LPQA+++I+P L ++ + LLK SSL   +G  DL+     +   T +A E 
Sbjct: 406 YRTMMRSIILPQAVKNILPALVNECVALLKESSLVSVIGVQDLMRRANVVQASTFRAFEA 465

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L    IY  L +++    + L  ++   +
Sbjct: 466 LLFAGAIYYCLVLILTSLAHLLERRLRRSD 495



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 39/84 (46%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +Q  + ++  + Y   I+ G + T        +   + G+++   ++S+ + + W   VY
Sbjct: 275 NQLNLDFSILNGYVGYIVKGTLVTLLFTLVSALLGFVWGSILSLFKISSVRPLQWFATVY 334

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
             VFR  P L+ +F +Y +   + 
Sbjct: 335 TSVFRGTPLLLQLFIIYYATPQLF 358


>gi|187735937|ref|YP_001878049.1| polar amino acid ABC transporter, inner membrane subunit
           [Akkermansia muciniphila ATCC BAA-835]
 gi|187425989|gb|ACD05268.1| polar amino acid ABC transporter, inner membrane subunit
           [Akkermansia muciniphila ATCC BAA-835]
          Length = 494

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 114/234 (48%), Gaps = 16/234 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLL 222
            +  F+      + T       ++  FS +LGI++  F   + R  H+KTG       L 
Sbjct: 274 FYVNFMQEGRWKYLTNGFLVTVEVSFFSVLLGILVG-FVVAVIRATHDKTGNLRFLNALC 332

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +   +I G P +V + + Y + F            GS    + +   +A    + A++A
Sbjct: 333 KLYLTVIRGTPVVVQLLMIYFVIF------------GSVDVSKVLVAVVAFGFNSGAYVA 380

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R G++++ +GQ EA  +LGL + +    ++LPQA ++++P L ++++ LLK +S++ 
Sbjct: 381 EIIRGGIMSIDKGQFEAGRSLGLGYAQTMIYIILPQAFKNVLPSLGNEFIVLLKETSVSG 440

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   DL   G  I +QT  A   +     IYLS+ ++ +  + +L  K+   E
Sbjct: 441 YIALQDLTKGGDIIRSQTYTAFMPLTAVALIYLSVVMLFSWMLGKLERKLKNNE 494



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRNIP 140
              +  GF+ T  ++F  ++   ++G +V   R +       + +  +C++Y+ V R  P
Sbjct: 284 WKYLTNGFLVTVEVSFFSVLLGILVGFVVAVIRATHDKTGNLRFLNALCKLYLTVIRGTP 343

Query: 141 PLVVIFFLYKSVL 153
            +V +  +Y  + 
Sbjct: 344 VVVQLLMIYFVIF 356


>gi|328957593|ref|YP_004374979.1| high affinity arginine ABC transporter binding lipoprotein
           [Carnobacterium sp. 17-4]
 gi|328673917|gb|AEB29963.1| high affinity arginine ABC transporter binding lipoprotein
           [Carnobacterium sp. 17-4]
          Length = 507

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 15/238 (6%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                        G         +          I V S   G +L +      R    K
Sbjct: 282 THLQAAQQETSGEGSNSIFNYWQYFLRGTGYTILISVVSVFFGSILGIGL-SFMRMSKNK 340

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
               +   Y+    + G P ++ +   Y              +G     P   S  IA+S
Sbjct: 341 IMHFVATAYVEF--VRGTPMMIQVMFIY------------FAVGYLINIPALASGIIAVS 386

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             +AA+I EI+RSGL +VP+GQ EAA +LG++ + + R ++ PQA+++I P L ++++ +
Sbjct: 387 LNSAAYICEIIRSGLNSVPKGQAEAARSLGMSKKISMRQIIFPQALKNIWPALGNEFITV 446

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K SS+   +G +DL+     + + + + I  +++ M IY  L+  +   +N    K+
Sbjct: 447 IKESSIVSIIGVSDLIFQTKVVTSVSYRGIAPLVVTMIIYFILTFSLTKLLNHYEGKM 504



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 39/76 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y    L G   T  ++   +   +I+G  +   R+S NK++ ++   YVE  R  P ++
Sbjct: 301 NYWQYFLRGTGYTILISVVSVFFGSILGIGLSFMRMSKNKIMHFVATAYVEFVRGTPMMI 360

Query: 144 VIFFLYKSVLSVLPIP 159
            + F+Y +V  ++ IP
Sbjct: 361 QVMFIYFAVGYLINIP 376


>gi|315181927|gb|ADT88840.1| hypothetical amino acid ABC transporter, permease protein [Vibrio
           furnissii NCTC 11218]
          Length = 314

 Score =  175 bits (445), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 19/256 (7%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P V+  + +  V     I     V     +          +T++ +    +F+ +LG++ 
Sbjct: 78  PQVIEHYTHLLVGEGDLIFQGDTVAQLNEWKFGPIAHGLWVTIEISFISLIFAVLLGLIF 137

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L      R    +T + L L Y+   LI G P LV I + Y             FIG  
Sbjct: 138 GLM-----RVAKNQTARNLALTYVE--LIRGTPLLVQIFIVY------------FFIGTV 178

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  +ALS +T A++AEIVR+G+ A+P GQMEAA +LG+T+ KA R V+LPQA+
Sbjct: 179 LDFDRFTAGVVALSVFTGAYVAEIVRAGIQAIPNGQMEAARSLGMTYPKAMRYVILPQAL 238

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           +  +PPL  Q++NL+K+SSL   +   DL   G  +++ +    E+      +YL ++  
Sbjct: 239 KRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSGSFAPFEVWFTVAALYLLVTGT 298

Query: 381 IALFMNRLNAKIALKE 396
           ++  + RL  +++  +
Sbjct: 299 LSWAIQRLEKRLSASD 314



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++F  +I A ++G + G  R++ N+    +   YVE+ R  P LV IF +Y  
Sbjct: 115 GLWVTIEISFISLIFAVLLGLIFGLMRVAKNQTARNLALTYVELIRGTPLLVQIFIVYFF 174

Query: 152 V 152
           +
Sbjct: 175 I 175


>gi|291288058|ref|YP_003504874.1| polar amino acid ABC transporter, inner membrane subunit
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290885218|gb|ADD68918.1| polar amino acid ABC transporter, inner membrane subunit
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 316

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 15/213 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I ++S    I++ +    L+R       K L + YI   +I G P LV I + Y  
Sbjct: 119 VTLEISIYSIFFAIIIGVMTG-LARISKNPFLKKLSVFYIE--IIRGTPLLVQIFIFY-- 173

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      FIG         +   ALS +T A+IAEIVR+G+ +V +GQMEAA +LG
Sbjct: 174 ----------FFIGTVFNLERMTAGVAALSVFTGAYIAEIVRAGIQSVHKGQMEAARSLG 223

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++ KA  LV+LPQA R  +PP+  Q+++L+K+SSL   +   DL   G  ++  T    
Sbjct: 224 MSYPKAMVLVILPQAFRRTLPPMAGQFISLIKDSSLVSVISITDLTKAGREVVASTFSPF 283

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E+      +YL L+  ++  + RL  +++  ++
Sbjct: 284 EVWFTVAALYLVLTSALSYLVQRLEKRMSAMDR 316



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 8/142 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  ++   +  A IIG + G  R+S N  +  +   Y+E+ R  P LV IF  
Sbjct: 113 LLSGLLVTLEISIYSIFFAIIIGVMTGLARISKNPFLKKLSVFYIEIIRGTPLLVQIFIF 172

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG--------LSFPTLTMDTNAKIFVFSFVLGIVL 200
           Y  + +V  +   +  +                  +          A+    S+   +VL
Sbjct: 173 YFFIGTVFNLERMTAGVAALSVFTGAYIAEIVRAGIQSVHKGQMEAARSLGMSYPKAMVL 232

Query: 201 SLFATRLSRHFHEKTGKALPLL 222
            +      R      G+ + L+
Sbjct: 233 VILPQAFRRTLPPMAGQFISLI 254


>gi|261317402|ref|ZP_05956599.1| amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261296625|gb|EEY00122.1| amino acid ABC transporter [Brucella pinnipedialis B2/94]
          Length = 208

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 106/206 (51%), Positives = 151/206 (73%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            + ++GI+ S    R ++     TG+    + +S  LI GLP L LIA  + + FD P L
Sbjct: 3   VALLIGILASFAVARWAKRRQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKL 62

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G FN  GG+ + PEF++L++ALS YTA+FIAE VR+G++ V +GQ EAA A+GL   +  
Sbjct: 63  GTFNLTGGAQIKPEFLALFLALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTM 122

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           RL+++PQA+R IIPPL+SQYLNL+KNSSLA+A+G+ DLV+VGGTI+NQTGQA+E++ IWM
Sbjct: 123 RLIIVPQALRIIIPPLSSQYLNLIKNSSLAIAIGYPDLVAVGGTILNQTGQAVEVVAIWM 182

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            IYL +S++++  MN  NAK+AL E+
Sbjct: 183 VIYLGISLIVSGLMNWFNAKMALVER 208


>gi|89897620|ref|YP_521107.1| hypothetical protein DSY4874 [Desulfitobacterium hafniense Y51]
 gi|89337068|dbj|BAE86663.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 224

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 115/212 (54%), Gaps = 10/212 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++   +  +GIV+ LF   L R  + +  + L + YI  F   G P LV + + Y   F
Sbjct: 23  LELTAGAVGIGIVIGLF-MALMRLSNSRILRGLSIAYIDFF--RGTPLLVQLLMVY---F 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L  F          +F++   A+   + A+IAEI R+G+ ++ +GQ EAA +LG+T
Sbjct: 77  ALPQLLNFQVPDNY----QFIAAITAMGLNSGAYIAEIFRAGIQSIDKGQGEAARSLGMT 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+LPQA + +IPPL ++++ LLK+SSL   +   DL+  G  I+++T Q   I
Sbjct: 133 QGQAMRHVILPQAFKRVIPPLGNEFIALLKDSSLVSFIALQDLMYSGKLIVSRTYQPFVI 192

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L     YL+++++++ F+N    +    + +
Sbjct: 193 YLEVALFYLAMTLILSRFVNYTERRFGKSDNR 224



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 33/67 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    +    +IG  +   RLS ++++  +   Y++ FR  P LV +  +
Sbjct: 15  LLKGTLITLELTAGAVGIGIVIGLFMALMRLSNSRILRGLSIAYIDFFRGTPLLVQLLMV 74

Query: 149 YKSVLSV 155
           Y ++  +
Sbjct: 75  YFALPQL 81


>gi|163791315|ref|ZP_02185728.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Carnobacterium sp. AT7]
 gi|159873394|gb|EDP67485.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Carnobacterium sp. AT7]
          Length = 493

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 107/222 (48%), Gaps = 19/222 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             N  L     T+  +     F  +LG+VLS       R    K    +   Y+    + 
Sbjct: 288 YWNYFLKGTGYTILISVVSVFFGSILGVVLSFM-----RMSKNKIVHFVATAYVEF--VR 340

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ +   Y              +G     P   S  IA+S  +AA+I EI+RSGL 
Sbjct: 341 GTPMMIQVMFIY------------FAVGYLVNIPALASGIIAVSLNSAAYICEIIRSGLN 388

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ EAA +LG++ + A R ++ PQA+++I P L ++++ ++K SS+   +G +DL+
Sbjct: 389 SVPKGQSEAARSLGMSKKIAMRQIIFPQALKNIWPALGNEFITVIKESSIVSIIGVSDLI 448

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                + + + + I  +++ M IY  L+  +   +N    K+
Sbjct: 449 FQTRVVTSVSYRGIAPLVVTMIIYFILTFSLTKLLNHYEGKM 490



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 40/76 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y    L G   T  ++   +   +I+G ++   R+S NK+V ++   YVE  R  P ++
Sbjct: 287 NYWNYFLKGTGYTILISVVSVFFGSILGVVLSFMRMSKNKIVHFVATAYVEFVRGTPMMI 346

Query: 144 VIFFLYKSVLSVLPIP 159
            + F+Y +V  ++ IP
Sbjct: 347 QVMFIYFAVGYLVNIP 362


>gi|315283361|ref|ZP_07871572.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii
           FSL S4-120]
 gi|313613009|gb|EFR86940.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria marthii
           FSL S4-120]
          Length = 486

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G VL      L +
Sbjct: 255 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAVLGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   ++G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAVLGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|26991699|ref|NP_747124.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24986800|gb|AAN70588.1|AE016701_8 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 320

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEIVR+G+ ++ +GQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNAGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL +++ ++   +RL  ++A  +
Sbjct: 285 FSTFEIWFCVAGLYLLINLPLSHIASRLERRLAQSD 320



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T W++        +IG   G  RLS N  +  +  VYVE+ R  P LV IF  Y  
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 152 V 152
           +
Sbjct: 181 I 181


>gi|330830267|ref|YP_004393219.1| amino acid ABC transporter permease [Aeromonas veronii B565]
 gi|328805403|gb|AEB50602.1| Amino acid ABC transporter, permease protein [Aeromonas veronii
           B565]
          Length = 319

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 15/215 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +    K+ + + +  I+L   A  L+R       + L + Y+   LI G P LV I +
Sbjct: 119 WGVWVTVKLSLVAGIFAILLGTLAG-LARLSPNPALRNLAITYVE--LIRGTPLLVQIFI 175

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG       F +   AL+ +T A++AEIVR+G+ ++ +GQMEA 
Sbjct: 176 VY------------FFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRAGISSIHKGQMEAG 223

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG+T  +  R V+LPQA + ++PPL  Q++NL+K+SSL   +   DL   G  +++ T
Sbjct: 224 RSLGMTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSST 283

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               E+      +YL L+  ++  + RL  K A  
Sbjct: 284 FSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYARS 318



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 31/61 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+    I A ++GTL G  RLS N  +  +   YVE+ R  P LV IF +Y  
Sbjct: 120 GVWVTVKLSLVAGIFAILLGTLAGLARLSPNPALRNLAITYVELIRGTPLLVQIFIVYFF 179

Query: 152 V 152
           +
Sbjct: 180 I 180


>gi|219670747|ref|YP_002461182.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219541007|gb|ACL22746.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 224

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 114/212 (53%), Gaps = 10/212 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++   +  +GIV+ LF   L R  + +  +   + YI  F   G P LV I + Y   F
Sbjct: 23  LELTAGAVAMGIVIGLF-MALMRLSNSRILRGFAIAYIDFF--RGTPLLVQILMVY---F 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L  F          +F++   A+   + A+IAEI R+G+ ++ +GQ EAA +LG+T
Sbjct: 77  AVPQLLNFQIPDNY----QFIAGISAMGLNSGAYIAEIFRAGIQSIDKGQGEAARSLGMT 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+LPQA + +IPPL ++++ LLK+SSL   +   DL+  G  I+++T Q   I
Sbjct: 133 QGQAMRHVILPQAFKRVIPPLGNEFIALLKDSSLVSFIALQDLMYSGKLIVSRTYQPFVI 192

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L     YL+++++++ F+N    +    + +
Sbjct: 193 YLEVALFYLAMTLILSRFVNYTERRFGKSDNR 224



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    +    +IG  +   RLS ++++      Y++ FR  P LV I  +
Sbjct: 15  LLKGTLITLELTAGAVAMGIVIGLFMALMRLSNSRILRGFAIAYIDFFRGTPLLVQILMV 74

Query: 149 YKSVLSV 155
           Y +V  +
Sbjct: 75  YFAVPQL 81


>gi|268318646|ref|YP_003292302.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
 gi|262397021|emb|CAX66035.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
          Length = 537

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++    K           +  +       +  L    +T+       +  F +G+++ + 
Sbjct: 269 LMAQAVKEQPQAGSSKKENWFMSIMRRYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIV 328

Query: 204 ATRL-----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            T        + +  K    L  +YI  F   G P +V  A+ Y   +    L   N   
Sbjct: 329 RTIPTPKSTGKRWGLKIVNWLLAVYIEVF--RGTPMMVQAAVIY---YGIAQLWHLNLNR 383

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                   ++  + +S  T A++AE++R G+ A P+GQ EAA ALG+TH +    ++LPQ
Sbjct: 384 T-------LAALVIVSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQ 436

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT +  +   I   IYL L+
Sbjct: 437 AIRNSLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILT 496

Query: 379 IMIALFMNRLNAKI 392
             I    N +  K+
Sbjct: 497 FSITRIFNFIERKL 510



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y + IL G   T  LA  G I    IG LVG  R               +V W+  VY+
Sbjct: 295 RYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYI 354

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +  +  
Sbjct: 355 EVFRGTPMMVQAAVIYYGIAQLWH 378


>gi|116494831|ref|YP_806565.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei ATCC 334]
 gi|116104981|gb|ABJ70123.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
          Length = 485

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 19/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L     T+  +A    F  +LG + +L      R    K    + + YI    
Sbjct: 277 IHYWTYFLKGVEYTLLISAIGAFFGVLLGTIFALL-----RLSKNKLSHLIGVSYIEF-- 329

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ +   Y              IG     P  ++  IA+S  +AA++AEI+RSG
Sbjct: 330 VRGTPLMIQVMFVY------------FGIGIFIDIPALIAGLIAVSLNSAAYVAEIIRSG 377

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P GQ EAA +LGL+ R+    V+LPQA+++I P L +++++L+K SS+   +G  D
Sbjct: 378 IDSIPVGQTEAARSLGLSERQTMISVVLPQAIKNIWPALGNEFISLIKESSIVSIIGVTD 437

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     +   T + ++ IL+ M +Y  L+  ++  ++    K+
Sbjct: 438 LIYQLTVVQTATYKGVQPILVAMALYFVLTFGLSKLLSHFERKM 481



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T  L G   T  ++  G     ++GT+    RLS NKL   I   Y+E  R  P ++ 
Sbjct: 279 YWTYFLKGVEYTLLISAIGAFFGVLLGTIFALLRLSKNKLSHLIGVSYIEFVRGTPLMIQ 338

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +   + IP
Sbjct: 339 VMFVYFGIGIFIDIP 353


>gi|145298524|ref|YP_001141365.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851296|gb|ABO89617.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 319

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 15/215 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +    K+ + + V  I+L   A  L+R       + L + Y+   LI G P LV I +
Sbjct: 119 WGVWVTVKLSLVAGVFAILLGTLAG-LARLSPNPALRNLAVTYVE--LIRGTPLLVQIFI 175

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG       F +   AL+ +T A++AEIVR+G+ ++ +GQMEA 
Sbjct: 176 VY------------FFIGTVLNLDRFTAGVAALAVFTGAYVAEIVRAGISSIHKGQMEAG 223

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGLT  +  R V+LPQA + ++PPL  Q++NL+K+SSL   +   DL   G  +++ T
Sbjct: 224 RSLGLTSAQTMRYVILPQAFKRVLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSST 283

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               E+      +YL L+  ++  + RL  K A  
Sbjct: 284 FSPFEVWFTVALLYLVLTGTLSFLVRRLEVKYARS 318



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 31/61 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+    + A ++GTL G  RLS N  +  +   YVE+ R  P LV IF +Y  
Sbjct: 120 GVWVTVKLSLVAGVFAILLGTLAGLARLSPNPALRNLAVTYVELIRGTPLLVQIFIVYFF 179

Query: 152 V 152
           +
Sbjct: 180 I 180


>gi|322390972|ref|ZP_08064478.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142347|gb|EFX37819.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 520

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 13/223 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY---ISTFLI 229
            + L    +T+  +    +   ++G+++ +F T          G      +   +   + 
Sbjct: 290 PQFLRGTGMTLLISMTGTIAGLIIGLLIGVFRTAPKAKNKFLAGCQTAFGWFLNVYIEIF 349

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V   + +           FN     T      +    +S  T A+++EIVR G+
Sbjct: 350 RGTPMIVQSMVIFYGSAQA-----FNISLDRT-----WAAIFIVSINTGAYMSEIVRGGI 399

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AV  GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++  +K++S+   +   +L
Sbjct: 400 LAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVEL 459

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G TI  Q  Q      I   IY+ L+  I   +  +  ++
Sbjct: 460 YFTGNTIATQNYQYFPTFTIIAVIYIVLTFTITRILRYIERRL 502



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 10/78 (12%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVEVFRN 138
            L G   T  ++ +G I   IIG L+G  R +                W   VY+E+FR 
Sbjct: 292 FLRGTGMTLLISMTGTIAGLIIGLLIGVFRTAPKAKNKFLAGCQTAFGWFLNVYIEIFRG 351

Query: 139 IPPLVVIFFLYKSVLSVL 156
            P +V    ++       
Sbjct: 352 TPMIVQSMVIFYGSAQAF 369


>gi|42518173|ref|NP_964103.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41582457|gb|AAS08069.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
          Length = 537

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 115/254 (45%), Gaps = 17/254 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++    K           +  +       +  L    +T+       +  F +G+++ + 
Sbjct: 269 LMAQAVKEQPQAGGSKKENWFMSIMRRYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIV 328

Query: 204 ATRL-----SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            T        + +  K    L  +YI  F   G P +V  A+ Y   +    L   N   
Sbjct: 329 RTIPTPKSTGKRWGLKIVNWLLAVYIEVF--RGTPMMVQAAVIY---YGIAQLWHLNLNR 383

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                   ++  + +S  T A++AE++R G+ A P+GQ EAA ALG+TH +    ++LPQ
Sbjct: 384 T-------VAALVIVSINTGAYLAEVIRGGINATPKGQFEAASALGMTHSQQMWHIILPQ 436

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT +  +   I   IYL L+
Sbjct: 437 AIRNSLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFEFFQTYFIISMIYLILT 496

Query: 379 IMIALFMNRLNAKI 392
             I    N +  K+
Sbjct: 497 FSITRIFNFIEKKL 510



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y + IL G   T  LA  G I    IG LVG  R               +V W+  VY+
Sbjct: 295 RYGSMILGGVGMTLLLALVGTIAGFFIGLLVGIVRTIPTPKSTGKRWGLKIVNWLLAVYI 354

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +  +  
Sbjct: 355 EVFRGTPMMVQAAVIYYGIAQLWH 378


>gi|326797190|ref|YP_004315010.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326547954|gb|ADZ93174.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 314

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/217 (30%), Positives = 113/217 (52%), Gaps = 19/217 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            +T+  +    VFS +LG++  L      R  H +  + L + Y+   +I G P LV I 
Sbjct: 117 WVTIKISFISLVFSIILGLIFGLM-----RISHRQVLRNLAVTYVE--VIRGTPLLVQIF 169

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + Y             FIG       F +   ALS +T A++AEIVR+G+ AVP GQMEA
Sbjct: 170 IVY------------FFIGTVFDLDRFTAGVAALSIFTGAYVAEIVRAGIQAVPTGQMEA 217

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LG+ + +A   V++PQA++  +PPL  Q++NL+K+SSL   +   DL   G  +++ 
Sbjct: 218 ARSLGMNYVQAMCYVIMPQAIKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSG 277

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    E+      +YL ++  ++  +  L  +++  +
Sbjct: 278 SFAPFEVWFTVAALYLIVTGALSWAIQILEKRLSASD 314



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 36/68 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  ++F  ++ + I+G + G  R+S  +++  +   YVEV R  P LV IF +
Sbjct: 112 IAEGLWVTIKISFISLVFSIILGLIFGLMRISHRQVLRNLAVTYVEVIRGTPLLVQIFIV 171

Query: 149 YKSVLSVL 156
           Y  + +V 
Sbjct: 172 YFFIGTVF 179


>gi|16804289|ref|NP_465774.1| hypothetical protein lmo2250 [Listeria monocytogenes EGD-e]
 gi|224500950|ref|ZP_03669257.1| hypothetical protein LmonFR_00275 [Listeria monocytogenes FSL
           R2-561]
 gi|16411720|emb|CAD00328.1| arpJ [Listeria monocytogenes EGD-e]
          Length = 486

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKEYQKEANKLMFQDGSFYEKYGNYFVTGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFVTGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|254899048|ref|ZP_05258972.1| hypothetical protein LmonJ_04529 [Listeria monocytogenes J0161]
 gi|254912811|ref|ZP_05262823.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937138|ref|ZP_05268835.1| arpJ [Listeria monocytogenes F6900]
 gi|284802697|ref|YP_003414562.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578]
 gi|284995839|ref|YP_003417607.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923]
 gi|258609741|gb|EEW22349.1| arpJ [Listeria monocytogenes F6900]
 gi|284058259|gb|ADB69200.1| hypothetical protein LM5578_2453 [Listeria monocytogenes 08-5578]
 gi|284061306|gb|ADB72245.1| hypothetical protein LM5923_2404 [Listeria monocytogenes 08-5923]
 gi|293590807|gb|EFF99141.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 486

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQKEANKLMFQDGSFYEKYGNYFVTGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFVTGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|224498994|ref|ZP_03667343.1| hypothetical protein LmonF1_04543 [Listeria monocytogenes Finland
           1988]
 gi|254831313|ref|ZP_05235968.1| hypothetical protein Lmon1_08142 [Listeria monocytogenes 10403S]
          Length = 486

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKEYQKEANKLMFQDGSFYEKYGNYFVTGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFVTGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|167036062|ref|YP_001671293.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862550|gb|ABZ00958.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 320

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEIVR+G+ ++ +GQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNAGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL +++ ++   +RL  ++A  +
Sbjct: 285 FSTFEIWFCVAGLYLLINLPLSHIASRLERRLAQSD 320



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T W++        +IG   G  RLS N  +  +  VYVE+ R  P LV IF  Y  
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 152 V 152
           +
Sbjct: 181 I 181


>gi|291542753|emb|CBL15863.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ruminococcus bromii L2-63]
          Length = 508

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 103/196 (52%), Gaps = 14/196 (7%)

Query: 203 FATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
              R  + F +   K   ++  I   +I G P +V + + Y +               ++
Sbjct: 326 LDKRKCKSFGDCVLKFFNVICNIYITVIRGTPVVVQLMIMYYIIL-------------AS 372

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V     +  IA    +AA++AEIVRSG++AV  GQ EA+ +LG  +R+   +V+LPQA++
Sbjct: 373 VRNGIFAAIIAFGMNSAAYVAEIVRSGIMAVDIGQTEASRSLGFNNRQTMTMVVLPQAIK 432

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++P L ++ + LLK +S+A  V  AD+  +G  I ++T +A   ++    IYL + +++
Sbjct: 433 NVLPALGNEIITLLKETSVAGYVALADITYIGNMIRSRTYEAFFPLITVALIYLVIVLVL 492

Query: 382 ALFMNRLNAKIALKEK 397
           +  + R   ++   E+
Sbjct: 493 SYILRRFERRLKKSER 508



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 16/104 (15%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------------NKLV 125
             +    +L G + T  +     I   IIG ++   R +                  K  
Sbjct: 283 TDNRWQQLLSGLLVTLEITLFAAIIGVIIGFVIALVRATHDIQLDKRKCKSFGDCVLKFF 342

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
             IC +Y+ V R  P +V +  +Y  +L+ +     + ++ FGM
Sbjct: 343 NVICNIYITVIRGTPVVVQLMIMYYIILASVRNGIFAAIIAFGM 386


>gi|309809954|ref|ZP_07703802.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169742|gb|EFO71787.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 422

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 137/318 (43%), Gaps = 31/318 (9%)

Query: 92  GFVNTFWLAF-SGMIPATIIGTLVGAGRLSANKLVAWI--------CRVYVEVFRNIPPL 142
           G +NT  LA  SG + A ++  L+       N  +               + V +N P L
Sbjct: 115 GKINTLVLALQSGKVSAVVMEELIAKAYAHNNPSLYCFKSDLKEPQAGNAIAVAKNQPDL 174

Query: 143 V------VIFFLYKSVLSVLPIPDHSIVLPFGMFL--NNRGLSFPTLTMDTNAKIFVFSF 194
           +      V   + K ++    +P  +  +          +   +    ++    I +FS 
Sbjct: 175 LKEVNKTVDKVIAKKLVLTKFLPQAAKSMKKSTAKKDPFKYAPYFIKGIELTLVITIFSV 234

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G++L      L R       K   + YI   LI G P +V I   Y           F
Sbjct: 235 LIGVILGTIL-ALMRLSSHLALKIPAICYIE--LIRGTPQMVQILFVY-----------F 280

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                       ++  IA+   + A++AE +RSG+ ++P GQ EAA +LGL+     R V
Sbjct: 281 GIGAIIQNMSALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYV 340

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQA+++I P L ++++ LLK+SSL   +G A+ +     +   T Q +  +++ M IY
Sbjct: 341 VIPQAIKNIWPALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIY 400

Query: 375 LSLSIMIALFMNRLNAKI 392
             ++  +   ++ +  ++
Sbjct: 401 FIMTFTLTRILSYMERRM 418



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 36/77 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  +    ++   I+GT++   RLS++  +      Y+E+ R  P +V 
Sbjct: 215 YAPYFIKGIELTLVITIFSVLIGVILGTILALMRLSSHLALKIPAICYIELIRGTPQMVQ 274

Query: 145 IFFLYKSVLSVLPIPDH 161
           I F+Y  + +++     
Sbjct: 275 ILFVYFGIGAIIQNMSA 291


>gi|313500999|gb|ADR62365.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 320

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEIVR+G+ ++ +GQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNAGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL +++ ++   +RL  ++A  +
Sbjct: 285 FSTFEIWFCVAGLYLLINLPLSHIASRLERRLAQSD 320



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T W++        +IG   G  RLS N  +  +  VYVE+ R  P LV IF  Y  
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 152 V 152
           +
Sbjct: 181 I 181


>gi|254826861|ref|ZP_05231548.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL N3-165]
 gi|258599240|gb|EEW12565.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL N3-165]
          Length = 486

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|315304435|ref|ZP_07874723.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii
           FSL F6-596]
 gi|313627196|gb|EFR96041.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria ivanovii
           FSL F6-596]
          Length = 486

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F   T+ T A       + G VL      L +
Sbjct: 255 TGLLKDYQKEANKLMFQDGSFYEKYGNYFVKGTLITIALA-AIGVLCGAVLGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFILTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   ++G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFVKGTLITIALAAIGVLCGAVLGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|149002609|ref|ZP_01827541.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
 gi|147759220|gb|EDK66213.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
          Length = 492

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           ++  +L     +          L   +  N + L          A I F  + V+GI+  
Sbjct: 252 ILDKYLASESSTASTSTVDETTLWGLLQNNYKQLLSGLGITLALALISFAIAIVIGIIFG 311

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +F+         K+ + +  +++   +I G+P ++L A  +      P   + +  G  +
Sbjct: 312 MFS-----VSPYKSLRVISEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SITGQQS 360

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA +
Sbjct: 361 PINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGISYGKTMRKIILPQATK 420

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++
Sbjct: 421 LMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAIFYLVIITLL 480

Query: 382 ALFMNRLNAKIA 393
                RL  +I 
Sbjct: 481 TRLAKRLEKRIR 492



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 285 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 344

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + + +         
Sbjct: 345 FWGIPNFIESITGQQSP 361


>gi|313673773|ref|YP_004051884.1| amino acid abc transporter membrane protein, paat family
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940529|gb|ADR19721.1| amino acid ABC transporter membrane protein, PAAT family
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 315

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 15/213 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   S ++ IV+ +    L R       K L + Y+   LI G P LV I + Y 
Sbjct: 118 WNTLYISFVSILIAIVIGIVTG-LCRISSNVALKKLAVTYVE--LIRGTPLLVQIFIFY- 173

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       FIG         S   AL+ +  A+IAEIVR+G+ ++P+GQMEA+ +L
Sbjct: 174 -----------FFIGTVFKLDRITSGIAALAIFAGAYIAEIVRAGIQSIPKGQMEASRSL 222

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ + +A R V+LPQA++  +PP+  Q+++L+K+SSL   +   DL   G  I++ T   
Sbjct: 223 GMNYFQAMRYVILPQAIKRTLPPMAGQFISLIKDSSLVSVISITDLTKAGREIVSSTFSP 282

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            E+  +   +YL L+  ++  +  L  ++A  +
Sbjct: 283 FEVWFVVAVMYLVLTSGLSFLVQILERRLAASD 315



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + VG  NT +++F  ++ A +IG + G  R+S+N  +  +   YVE+ R  P LV IF  
Sbjct: 113 LTVGLWNTLYISFVSILIAIVIGIVTGLCRISSNVALKKLAVTYVELIRGTPLLVQIFIF 172

Query: 149 YKSVLSVLP 157
           Y  + +V  
Sbjct: 173 YFFIGTVFK 181


>gi|255026707|ref|ZP_05298693.1| hypothetical protein LmonocytFSL_10867 [Listeria monocytogenes FSL
           J2-003]
          Length = 486

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKEYQKEANKLMFQDGSFYEKYGNYFVTGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFVTGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|46908483|ref|YP_014872.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes str. 4b F2365]
 gi|226224858|ref|YP_002758965.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes Clip81459]
 gi|254825186|ref|ZP_05230187.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J1-194]
 gi|254931637|ref|ZP_05264996.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes HPB2262]
 gi|254992059|ref|ZP_05274249.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J2-064]
 gi|255519729|ref|ZP_05386966.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J1-175]
 gi|46881754|gb|AAT05049.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes serotype 4b str. F2365]
 gi|225877320|emb|CAS06034.1| Putative amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293583191|gb|EFF95223.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes HPB2262]
 gi|293594430|gb|EFG02191.1| his/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J1-194]
 gi|328465831|gb|EGF37019.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 1816]
 gi|328472142|gb|EGF43017.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 220]
          Length = 486

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|300763939|ref|ZP_07073935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria
           monocytogenes FSL N1-017]
 gi|300515280|gb|EFK42331.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter [Listeria
           monocytogenes FSL N1-017]
          Length = 486

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|260881503|ref|ZP_05404565.2| glutamine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
 gi|260848606|gb|EEX68613.1| glutamine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
          Length = 221

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 72/214 (33%), Positives = 117/214 (54%), Gaps = 13/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              KI   S  LG+V+ LF   ++R    K  + L  +Y+  F   G P LV I L Y  
Sbjct: 21  VTIKITALSVALGVVIGLFVG-IARISRIKLLRVLAAIYVDFF--RGTPLLVQIFLVY-- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PV      I G  V P F++   +    + A++AEI R+G+ ++ +GQMEA  +LG
Sbjct: 76  -FALPV------ITGQRVDP-FVAAIGSCGINSGAYVAEIFRAGIQSIDKGQMEAGRSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R +++PQA + +IPPL ++++ LLK+SSL   +GF +L   G  II +T  ++
Sbjct: 128 MTWVQTMRYIIVPQAFKRVIPPLGNEFIALLKDSSLVSVIGFEELTRRGQLIIAKTYGSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           EI L    IYL++++ I+ F+  L  +    ++ 
Sbjct: 188 EIWLSVAVIYLAMTLTISRFVAYLERRYKTDDRH 221



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 37/80 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  +    +    +IG  VG  R+S  KL+  +  +YV+ FR  P LV IF +
Sbjct: 15  LLVGAGVTIKITALSVALGVVIGLFVGIARISRIKLLRVLAAIYVDFFRGTPLLVQIFLV 74

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y ++  +        V   G
Sbjct: 75  YFALPVITGQRVDPFVAAIG 94


>gi|309785600|ref|ZP_07680231.1| general L-amino acid transport system permease protein aapQ
           [Shigella dysenteriae 1617]
 gi|308926720|gb|EFP72196.1| general L-amino acid transport system permease protein aapQ
           [Shigella dysenteriae 1617]
          Length = 236

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 112/236 (47%), Positives = 154/236 (65%), Gaps = 1/236 (0%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++ +  KTG+     
Sbjct: 1   MSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTW 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            I+  LI GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIA
Sbjct: 61  PIAAVLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAALTLALSVYTSAFIA 120

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AVP GQ EAA +LGL +    R V++PQA+R IIPPLTSQYLN++KNSSLA 
Sbjct: 121 EIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAA 180

Query: 343 AVGFADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+G+ D+VS+  GT++NQTGQAIE I + M +YL +S+ I+L MN  N +IA+ E+
Sbjct: 181 AIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRIAIVER 236


>gi|148550099|ref|YP_001270201.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148514157|gb|ABQ81017.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 320

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWISVVSGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEIVR+G+ ++ +GQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNAGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL +++ ++   +RL  ++A  +
Sbjct: 285 FSTFEIWFCVAGLYLLINLPLSHIASRLERRLAQSD 320



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T W++        +IG   G  RLS N  +  +  VYVE+ R  P LV IF  Y  
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 152 V 152
           +
Sbjct: 181 I 181


>gi|16801415|ref|NP_471683.1| hypothetical protein lin2352 [Listeria innocua Clip11262]
 gi|16414875|emb|CAC97579.1| lin2352 [Listeria innocua Clip11262]
          Length = 486

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQNEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|315160767|gb|EFU04784.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315579366|gb|EFU91557.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
          Length = 546

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 310 WNQYGDMFLRGTGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 369

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I  S  T A+++
Sbjct: 370 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFIV-SVNTGAYMS 417

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 418 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 477

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 478 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 527



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 312 QYGDMFLRGTGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 371

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 372 EVFRGTPMMVQAMVIFYGLALAF 394


>gi|331701132|ref|YP_004398091.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329128475|gb|AEB73028.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 489

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                        T+  +     F  ++G++L+L      R   +K  + L + Y     
Sbjct: 281 FHYWKYFAKGVEYTILISIVSTFFGVLIGVILALM-----RFSKQKWLRGLAISYTEF-- 333

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P +V +   Y              IG     P  +S  IA+S  + A++AEI+R G
Sbjct: 334 IRGTPLMVQVLFVY------------FGIGVVVNIPALISGMIAVSLNSGAYVAEIIRGG 381

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V +GQ EAA +LGL+     R V+LPQA ++I P L +++++L+K SS+   +G  D
Sbjct: 382 INSVAKGQTEAAASLGLSKGDLMRFVILPQAFKNIWPALGNEFISLIKESSIVSIIGVTD 441

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+     +   T + +  I + M +Y  ++  +   +N    K+ 
Sbjct: 442 LIYQLNIVRADTYRGVMPIFVAMLLYFIMTFALTRVLNHFEGKMK 486



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 30/75 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  ++        +IG ++   R S  K +  +   Y E  R  P +V 
Sbjct: 283 YWKYFAKGVEYTILISIVSTFFGVLIGVILALMRFSKQKWLRGLAISYTEFIRGTPLMVQ 342

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +  V+ IP
Sbjct: 343 VLFVYFGIGVVVNIP 357


>gi|229587938|ref|YP_002870057.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229359804|emb|CAY46654.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 319

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 117/224 (52%), Gaps = 15/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +  L      + T   + V S +LG+ + L AT L R     T + L  +Y+   L+ G 
Sbjct: 111 HWALGPLMWGLWTTLWLSVVSGILGLAIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGT 167

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y             FIG         +   ALS +T A++AEIVR+G+ ++
Sbjct: 168 PLLVQIFIFY------------FFIGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSI 215

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA +LGL+  ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L+  
Sbjct: 216 TRGQNEAARSLGLSASQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKS 275

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  +I  +    EI+     +YL +++ ++   +RL  ++A  +
Sbjct: 276 GREVITTSFSPFEILFCVAGLYLLINLPLSKMASRLERRLAQSD 319



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T WL+    I    IG   G  RLS+N  +  +  +YVE+ R  P LV IF  
Sbjct: 117 LMWGLWTTLWLSVVSGILGLAIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 176

Query: 149 YKSV 152
           Y  +
Sbjct: 177 YFFI 180


>gi|290893601|ref|ZP_06556583.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J2-071]
 gi|290556803|gb|EFD90335.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL J2-071]
          Length = 486

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|297156640|gb|ADI06352.1| amino acid ABC transporter [Streptomyces bingchenggensis BCW-1]
          Length = 337

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 10/263 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +  L      +      +    +G      G       + T  ++ V +  +G V  +
Sbjct: 48  LSVVVLAVLAAQLGHFLITNPNFEWGTVGAYFGAQVFGQGIATTVELTVVAMAIGTVGGV 107

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKPVLGQFN 255
           F   + R    +    +   Y+  F   G+P LV +   Y L        F  P   +F 
Sbjct: 108 FV-AVGRMSENRVLSTVCGAYVWFF--RGIPVLVQLIFWYNLSALLPRISFGIPFGPEFI 164

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               +T+   + +  + L    AA++AEIVR GL+ V  GQ EAA ALG+   +  R ++
Sbjct: 165 SAETNTLISPWFAAILGLGLNEAAYMAEIVRGGLLGVDHGQTEAASALGMGRARILRRIV 224

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR I+PP  SQ +N+LK +SL   +  ADL+    +I N+T + I ++++    YL
Sbjct: 225 LPQAMRFIVPPTGSQVINMLKATSLVSVIALADLLYTAQSIYNRTFETIPLLVVACLWYL 284

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++ +  + +    A    +
Sbjct: 285 VMTSVLYVGQSFIERYYARGSSR 307



 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 43/116 (37%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A     G   T  L    M   T+ G  V  GR+S N++++ +C  YV  FR IP LV +
Sbjct: 81  AQVFGQGIATTVELTVVAMAIGTVGGVFVAVGRMSENRVLSTVCGAYVWFFRGIPVLVQL 140

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            F Y     +  I       P  +      L  P         +   +++  IV  
Sbjct: 141 IFWYNLSALLPRISFGIPFGPEFISAETNTLISPWFAAILGLGLNEAAYMAEIVRG 196


>gi|313607306|gb|EFR83728.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria
           monocytogenes FSL F2-208]
          Length = 486

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|260893885|ref|YP_003239982.1| polar amino acid ABC transporter, inner membrane subunit [Ammonifex
           degensii KC4]
 gi|260866026|gb|ACX53132.1| polar amino acid ABC transporter, inner membrane subunit [Ammonifex
           degensii KC4]
          Length = 233

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/231 (31%), Positives = 115/231 (49%), Gaps = 11/231 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R L +  L      KI   +  LG V  L    L R    +  + L   Y+    + G 
Sbjct: 5   WRNLPYLLLGAVETLKITCLAVSLGCVFGLIVG-LGRLSRNRVIRFLSTCYVDF--LRGT 61

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS--------LYIALSCYTAAFIAEI 284
           P LV I + Y          Q   +    +   F S          IA S  + A++AEI
Sbjct: 62  PLLVQIFIVYFGLPQLLEQLQNFLVESWGLPRLFTSTHIPAFAAAIIATSLNSGAYVAEI 121

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++P+GQMEAA +LG+T+R+A R V+LPQA R+IIPPL ++++ +LK++SL   +
Sbjct: 122 FRAGIQSIPKGQMEAARSLGMTYRQAMRYVILPQAFRNIIPPLGNEFIAMLKDTSLLSVI 181

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  +L   G  II  T +  EI L    IYL L++ I+  ++    ++ ++
Sbjct: 182 GIVELTRRGQIIIASTFRPFEIWLTVALIYLILTLSISRLVDYWEKRLRVR 232



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 43/87 (49%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G V T  +    +    + G +VG GRLS N+++ ++   YV+  R  P L
Sbjct: 5   WRNLPYLLLGAVETLKITCLAVSLGCVFGLIVGLGRLSRNRVIRFLSTCYVDFLRGTPLL 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V IF +Y  +  +L    + +V  +G+
Sbjct: 65  VQIFIVYFGLPQLLEQLQNFLVESWGL 91


>gi|307274211|ref|ZP_07555419.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307291685|ref|ZP_07571560.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312904644|ref|ZP_07763799.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|306497304|gb|EFM66846.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306509173|gb|EFM78235.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|310631996|gb|EFQ15279.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|315028836|gb|EFT40768.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315145376|gb|EFT89392.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 546

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 310 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 369

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I  S  T A+++
Sbjct: 370 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFIV-SVNTGAYMS 417

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 418 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 477

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 478 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 527



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 312 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 371

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 372 EVFRGTPMMVQAMVIFYGLALAF 394


>gi|227555893|ref|ZP_03985940.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|312901081|ref|ZP_07760370.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|227175060|gb|EEI56032.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|311291827|gb|EFQ70383.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315168140|gb|EFU12157.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315573554|gb|EFU85745.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315582098|gb|EFU94289.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 546

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 310 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 369

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I  S  T A+++
Sbjct: 370 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFIV-SVNTGAYMS 417

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 418 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 477

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 478 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 527



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 312 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 371

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 372 EVFRGTPMMVQAMVIFYGLALAF 394


>gi|182436031|ref|YP_001823750.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776655|ref|ZP_08235920.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178464547|dbj|BAG19067.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326656988|gb|EGE41834.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 322

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 9/258 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV+  L  ++       +           +   ++    T+  +    V   +LG+VL++
Sbjct: 45  VVVIGLLVALGYAFSQGNIQWHAVGDKLFDKNVVAGAGRTLLISVLAMVLGVILGVVLAV 104

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF--IGGS 260
                 R         +  LYI  F   G P  V + L + L    PVL          +
Sbjct: 105 M-----RLSKNPVTSWVAWLYIWFF--RGTPVYVQLLLWFNLALIFPVLNIPFIYKDEMT 157

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            V   FM   + L+   AA++AEI R+G+ +V  GQ EA+ ALG+T  K  R V+LPQA+
Sbjct: 158 DVMTPFMCALLGLALNEAAYMAEICRAGIQSVDEGQTEASHALGMTQGKTMRRVVLPQAL 217

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R IIPP  ++++N+LK SSL  AV + +L+     I + +   +E++ +    Y+ ++ +
Sbjct: 218 RVIIPPTGNEFINMLKTSSLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSV 277

Query: 381 IALFMNRLNAKIALKEKK 398
            ++    L  + A    +
Sbjct: 278 FSVGQYYLERRFARGSLR 295



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 2/111 (1%)

Query: 69  GFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           G+   QG + + +  D  +   ++ G   T  ++   M+   I+G ++   RLS N + +
Sbjct: 55  GYAFSQGNIQWHAVGDKLFDKNVVAGAGRTLLISVLAMVLGVILGVVLAVMRLSKNPVTS 114

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           W+  +Y+  FR  P  V +   +   L    +    I       +    + 
Sbjct: 115 WVAWLYIWFFRGTPVYVQLLLWFNLALIFPVLNIPFIYKDEMTDVMTPFMC 165


>gi|199598208|ref|ZP_03211630.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|258508351|ref|YP_003171102.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|199590969|gb|EDY99053.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|257148278|emb|CAR87251.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259649665|dbj|BAI41827.1| amino acid ABC transporter permease and substrate binding
           components [Lactobacillus rhamnosus GG]
          Length = 485

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 19/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L     T+  +A    F  +LG + +L   RLS+H   +    + + YI    
Sbjct: 277 LHYWTYFLKGVEYTLLISAIGAFFGVLLGTIFALL--RLSKH---RLPHLIGVAYIEF-- 329

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ +   Y              IG     P  ++  IA+S  +AA++AEI+RSG
Sbjct: 330 VRGTPLMIQVMFVY------------FGIGIFIDIPALVAGLIAVSLNSAAYVAEIIRSG 377

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P GQ EAA +LGL+ R+    V+LPQA+++I P L +++++L+K SS+   +G  D
Sbjct: 378 IDSIPIGQTEAARSLGLSERQTMTSVVLPQAIKNIWPALGNEFISLIKESSIVSIIGVTD 437

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     +   T + ++ ILI M +Y  L+  ++  ++    K+
Sbjct: 438 LIYQLTVVQTATYKGVQPILIAMVLYFVLTFGLSKLLSHFERKM 481



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T  L G   T  ++  G     ++GT+    RLS ++L   I   Y+E  R  P ++ 
Sbjct: 279 YWTYFLKGVEYTLLISAIGAFFGVLLGTIFALLRLSKHRLPHLIGVAYIEFVRGTPLMIQ 338

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +   + IP
Sbjct: 339 VMFVYFGIGIFIDIP 353


>gi|81428667|ref|YP_395667.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78610309|emb|CAI55358.1| Putative amino acid ABC transporter, substrate binding/permease
           subunit [Lactobacillus sakei subsp. sakei 23K]
          Length = 487

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 118/266 (44%), Gaps = 20/266 (7%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +   +N P LV       + +    +    +     +   N   +         AK   +
Sbjct: 233 IAFPKNSPTLVAAANKSIAQIKKQKLIPQYLKSAGSLMKTNTHNTSMWHYWSYFAKGIGY 292

Query: 193 SFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           +  + I+  +           +R    K   +L ++YI    + G P ++ I   Y    
Sbjct: 293 TLFITIISIIIGIFIGVVLAFARLSKNKLFHSLAVMYIEF--VRGTPLMIQIMFVY---- 346

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                     IG     P   +  IA+S  +AA++AEI+RSG+ A+  GQ EA+ +LGL+
Sbjct: 347 --------FGIGLWVNIPALFAGVIAVSLNSAAYVAEIIRSGINAIDAGQTEASRSLGLS 398

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++LPQA+++I P L +++++L+K SS+   +G  DL+     + + T + +  
Sbjct: 399 QHDTMRYIILPQALKNIWPALGNEFISLIKESSIVSIIGVTDLIYQLKVVQSATYKGVAP 458

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           I + M IY  L+  ++  +N +  K+
Sbjct: 459 IFVAMVIYFILTFSLSKLLNHIERKM 484



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           TS   Y +    G   T ++    +I    IG ++   RLS NKL   +  +Y+E  R  
Sbjct: 277 TSMWHYWSYFAKGIGYTLFITIISIIIGIFIGVVLAFARLSKNKLFHSLAVMYIEFVRGT 336

Query: 140 PPLVVIFFLYKSVLSVLPIP 159
           P ++ I F+Y  +   + IP
Sbjct: 337 PLMIQIMFVYFGIGLWVNIP 356


>gi|56807700|ref|ZP_00365576.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Streptococcus pyogenes M49
           591]
          Length = 401

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 231 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 273

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 274 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 333

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++    
Sbjct: 334 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMITLLTRLA 393

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 394 KRLEKRL 400



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 179 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 237

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 238 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 286

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 287 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 344

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 345 DTTIVSAIGLVELFQTGKIIIARNYQSF 372


>gi|270291410|ref|ZP_06197632.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus acidilactici 7_4]
 gi|270280256|gb|EFA26092.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus acidilactici 7_4]
          Length = 495

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 19/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +            T+  +     F  ++G +L+L   RLSRH    + +A+ L Y+    
Sbjct: 290 IHYWKYFALGVGYTILISLVGVCFGSIIGALLALM--RLSRHT---SLRAIALAYVEF-- 342

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P +V + L Y              +G     P   +  IA+S  +AA++AE++R G
Sbjct: 343 VRGTPLMVQLMLVY------------FGLGIVVNLPALTAGMIAVSLNSAAYVAEVIRGG 390

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  GQ+EAA +LGL ++   R V+LPQA+++I P L +++++L+K SS+   +G  D
Sbjct: 391 INSVDEGQVEAAQSLGLNYQDRLRFVVLPQALKNIWPALGNEFISLIKESSIVSIIGVTD 450

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     + + T + +  IL+ M +Y  L+  ++  +     K 
Sbjct: 451 LIYQLKIVQSDTYRGVAPILVAMVLYFVLTFSLSRLLKFYEGKF 494



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y     +G   T  ++  G+   +IIG L+   RLS +  +  I   YVE  R  P +V 
Sbjct: 292 YWKYFALGVGYTILISLVGVCFGSIIGALLALMRLSRHTSLRAIALAYVEFVRGTPLMVQ 351

Query: 145 IFFLYKSVLSVLPIP 159
           +  +Y  +  V+ +P
Sbjct: 352 LMLVYFGLGIVVNLP 366


>gi|229552146|ref|ZP_04440871.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258539560|ref|YP_003174059.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|229314448|gb|EEN80421.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257151236|emb|CAR90208.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 485

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 114/224 (50%), Gaps = 19/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L     T+  +A    F  +LG + +L   RLS+H   +    + + YI    
Sbjct: 277 LHYWTYFLKGVEYTLLISAIGAFFGVLLGTIFALL--RLSKH---RLPHLIGVAYIEF-- 329

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ +   Y              IG     P  ++  IA+S  +AA++AEI+RSG
Sbjct: 330 VRGTPLMIQVMFVY------------FGIGIFIDIPALVAGLIAVSLNSAAYVAEIIRSG 377

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P GQ EAA +LGL+ R+    V+LPQA+++I P L +++++L+K SS+   +G  D
Sbjct: 378 IDSIPIGQTEAARSLGLSERQTMTSVVLPQAIKNIWPALGNEFISLIKESSIVSIIGVTD 437

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     +   T + ++ IL+ M +Y  L+  ++  ++    K+
Sbjct: 438 LIYQLTVVQTATYKGVQPILVAMVLYFVLTFGLSKLLSHFERKM 481



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T  L G   T  ++  G     ++GT+    RLS ++L   I   Y+E  R  P ++ 
Sbjct: 279 YWTYFLKGVEYTLLISAIGAFFGVLLGTIFALLRLSKHRLPHLIGVAYIEFVRGTPLMIQ 338

Query: 145 IFFLYKSVLSVLPIP 159
           + F+Y  +   + IP
Sbjct: 339 VMFVYFGIGIFIDIP 353


>gi|227520033|ref|ZP_03950082.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229546924|ref|ZP_04435649.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229550512|ref|ZP_04439237.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293382718|ref|ZP_06628643.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|293388099|ref|ZP_06632627.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|307268500|ref|ZP_07549875.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307276436|ref|ZP_07557559.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307286974|ref|ZP_07567049.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312908613|ref|ZP_07767555.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312909239|ref|ZP_07768096.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312952647|ref|ZP_07771511.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|227072581|gb|EEI10544.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229304369|gb|EEN70365.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229307852|gb|EEN73839.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|291079878|gb|EFE17242.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|291082550|gb|EFE19513.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|306501920|gb|EFM71209.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306506916|gb|EFM76063.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306515161|gb|EFM83701.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310625400|gb|EFQ08683.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310629435|gb|EFQ12718.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|311290481|gb|EFQ69037.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|315026795|gb|EFT38727.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315032967|gb|EFT44899.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315147131|gb|EFT91147.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315153569|gb|EFT97585.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315156251|gb|EFU00268.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315158604|gb|EFU02621.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315165862|gb|EFU09879.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315171420|gb|EFU15437.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315172654|gb|EFU16671.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|327534044|gb|AEA92878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 546

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 310 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 369

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I  S  T A+++
Sbjct: 370 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFIV-SVNTGAYMS 417

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 418 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 477

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 478 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 527



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 312 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 371

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 372 EVFRGTPMMVQAMVIFYGLALAF 394


>gi|217963588|ref|YP_002349266.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes HCC23]
 gi|217332858|gb|ACK38652.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes HCC23]
 gi|307571836|emb|CAR85015.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Listeria monocytogenes L99]
          Length = 486

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|329577432|gb|EGG58881.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 546

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 310 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 369

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I  S  T A+++
Sbjct: 370 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFIV-SVNTGAYMS 417

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 418 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 477

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 478 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 527



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 312 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 371

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 372 EVFRGTPMMVQAMVIFYGLALAF 394


>gi|296138522|ref|YP_003645765.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296026656|gb|ADG77426.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 483

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +    +     T+ T   +   SFV+G+ ++L    L+R    +  + L   YIS  
Sbjct: 267 WDMVRRNLVPMAKATVTTTIPLTAISFVIGLAIALGV-ALARMSKRRAVRGLARAYIS-- 323

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV + + +   +  P+           V   F++  +A S     + AEI+R+
Sbjct: 324 IIRGTPLLVQLVIIF---YGLPL--------AGVVIDPFLAAAVAFSLNVGGYAAEIIRA 372

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + AVPRGQ EAA  +G+ +R A R ++LPQA R+  PPL +  ++LLK++SLA A+   
Sbjct: 373 AIGAVPRGQWEAATTIGMDYRTALRRIILPQAARTATPPLANTLVSLLKDTSLASAILVT 432

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L          T     + ++    Y  +  +++L   RL  +      +
Sbjct: 433 ELFRTAQIAAAPTYDFFVMYVVAACYYWVICQVLSLVQTRLETRFERYVAR 483



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L     +    I   V   R+S  + V  + R Y+ + R  P LV +  ++  +   
Sbjct: 285 TIPLTAISFVIGLAIALGVALARMSKRRAVRGLARAYISIIRGTPLLVQLVIIFYGLPLA 344

Query: 156 LPIPDHSIVLPFGMFLN 172
             + D  +       LN
Sbjct: 345 GVVIDPFLAAAVAFSLN 361


>gi|238917619|ref|YP_002931136.1| polar amino acid transport system permease protein [Eubacterium
           eligens ATCC 27750]
 gi|238872979|gb|ACR72689.1| polar amino acid transport system permease protein [Eubacterium
           eligens ATCC 27750]
          Length = 506

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 16/214 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---TFLIFGLPTLVLIALKYQ 243
             I  F+ ++G+V+  F   + R  H+KTG    L +I      +I G PT+V + + Y 
Sbjct: 306 VIIAFFAALMGVVIG-FLIAVVRSNHDKTGHMKILNFICNIYLTVIRGTPTMVQLLIIYY 364

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F             S    + +   +A    + A++AEI RSG++++  GQ EAA +L
Sbjct: 365 VIFS------------SVHIDKLIVAILAFGINSGAYVAEIFRSGIMSIDNGQFEAARSL 412

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+++     V+LPQA ++++P L ++++ LLK +S++  +G  DL   G  I + T   
Sbjct: 413 GLSYKTTMISVILPQAFKNVLPALANEFIVLLKETSISGYIGLNDLTRGGDIIRSITYDP 472

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  ++    IYL + + ++  + +L  ++   E+
Sbjct: 473 MLPLIGVAIIYLVMVMGLSQLVKKLERRLRNNER 506



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVFRNIP 140
            T +L G +NT  +AF   +   +IG L+   R         K++ +IC +Y+ V R  P
Sbjct: 295 YTYLLKGLLNTVIIAFFAALMGVVIGFLIAVVRSNHDKTGHMKILNFICNIYLTVIRGTP 354

Query: 141 PLVVIFFLYKSVLSVLP 157
            +V +  +Y  + S + 
Sbjct: 355 TMVQLLIIYYVIFSSVH 371


>gi|313617589|gb|EFR89902.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria innocua
           FSL S4-378]
          Length = 486

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 255 TGLLKKYQNEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWIRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWIRWPAACYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|325274872|ref|ZP_08140885.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324099989|gb|EGB97822.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 320

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   I V S  LG+V+ LFA  L R     T + L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWISVVSGALGLVIGLFAG-LCRLSTNPTLRDLSTVYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEIVR+G+ ++ +GQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNAGQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL +++ ++   +RL  ++A  +
Sbjct: 285 FSTFEIWFCVAGLYLLINLPLSHIASRLERRLAQSD 320



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T W++        +IG   G  RLS N  +  +  VYVE+ R  P LV IF  Y  
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSTNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 152 V 152
           +
Sbjct: 181 I 181


>gi|104784003|ref|YP_610501.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95112990|emb|CAK17718.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 320

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   I V S  LG+V+ LFA  L R  +  T + L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWISVISGALGLVIGLFAG-LCRLSNNPTLRDLSTVYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEIVR+G+ ++ +GQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNGSQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL +++ ++   +RL  ++A  +
Sbjct: 285 FSTFEIWFCVAGLYLLINLPLSHIASRLERRLAQSD 320



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 28/61 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T W++        +IG   G  RLS N  +  +  VYVE+ R  P LV IF  Y  
Sbjct: 121 GLWTTLWISVISGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 152 V 152
           +
Sbjct: 181 I 181


>gi|304385122|ref|ZP_07367468.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|304329316|gb|EFL96536.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 495

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 19/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +            T+  +     F  ++G +L+L   RLSRH    + +A+ L Y+    
Sbjct: 290 IHYWKYFALGVGYTILISLVGVCFGSIIGALLALM--RLSRHT---SLRAIALAYVEF-- 342

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P +V + L Y              +G     P   +  IA+S  +AA++AE++R G
Sbjct: 343 VRGTPLMVQLMLVY------------FGLGIVVNLPALTAGMIAVSLNSAAYVAEVIRGG 390

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V  GQ+EAA +LGL ++   R V+LPQA+++I P L +++++L+K SS+   +G  D
Sbjct: 391 INSVDEGQVEAAQSLGLNYQDRLRFVVLPQALKNIWPALGNEFISLIKESSIVSIIGVTD 450

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     + + T + +  IL+ M +Y  L+  ++  +     K 
Sbjct: 451 LIYQLKIVQSDTYRGVAPILVAMVLYFVLTFSLSRLLKFYEGKF 494



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y     +G   T  ++  G+   +IIG L+   RLS +  +  I   YVE  R  P +V 
Sbjct: 292 YWKYFALGVGYTILISLVGVCFGSIIGALLALMRLSRHTSLRAIALAYVEFVRGTPLMVQ 351

Query: 145 IFFLYKSVLSVLPIP 159
           +  +Y  +  V+ +P
Sbjct: 352 LMLVYFGLGIVVNLP 366


>gi|307278646|ref|ZP_07559716.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306504706|gb|EFM73906.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
          Length = 546

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 310 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 369

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I  S  T A+++
Sbjct: 370 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFIV-SVNTGAYMS 417

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 418 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 477

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 478 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 527



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 312 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 371

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 372 EVFRGTPMMVQAMVIFYGLALAF 394


>gi|295395027|ref|ZP_06805237.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972094|gb|EFG47959.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 529

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 13/220 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            +        +     I V SF + +VL L      +    +    +  ++++ F   G 
Sbjct: 321 QQTWPALAKGLWNTLAITVVSFAIAMVLGLVFG-FMKVSQNRVLAGIASVFVAIF--RGT 377

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV     +  +F  P L         T    F++    L+    A++ EIVR G+ AV
Sbjct: 378 PLLVW---AFFFYFGLPQLMG-------TKGDVFIAGVATLALNAGAYLTEIVRGGIQAV 427

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQMEAA +LGL   K+ + V++PQA++   P + +Q +  LK+SSL + +GFA+L+  
Sbjct: 428 DVGQMEAARSLGLPWGKSMQKVVVPQAVKIATPSIINQLVITLKDSSLLLTIGFAELLYQ 487

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +     +  E+++I   IY  +  ++    N ++ ++
Sbjct: 488 AQQVYASNFRTTEMLIIVGVIYFVIITVLTWIANIVDRRL 527



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 38/78 (48%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++       A+  G  NT  +       A ++G + G  ++S N+++A I  V+V +FR 
Sbjct: 317 FSLAQQTWPALAKGLWNTLAITVVSFAIAMVLGLVFGFMKVSQNRVLAGIASVFVAIFRG 376

Query: 139 IPPLVVIFFLYKSVLSVL 156
            P LV  FF Y  +  ++
Sbjct: 377 TPLLVWAFFFYFGLPQLM 394


>gi|289435591|ref|YP_003465463.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289171835|emb|CBH28381.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 486

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F   T+ T A       + G V       L +
Sbjct: 255 TGLLKEYQKEANKLMFQDGSFYEKYGNYFIKGTLITIALA-AIGVLCGAVFGSLL-ALMK 312

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 313 LAKTRWLRWPASCYIEF--VRGTPLLIQIFIVF-----------FGTQIIGLDVSAFVSG 359

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 360 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILPALGN 419

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 420 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLVITSLIYFVLTFSLSRLLGVAE 479

Query: 390 AKIALKE 396
            ++   +
Sbjct: 480 RRMRTSD 486



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   + G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 279 YGNYFIKGTLITIALAAIGVLCGAVFGSLLALMKLAKTRWLRWPASCYIEFVRGTPLLIQ 338

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 339 IFIVFFGT 346


>gi|315151111|gb|EFT95127.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
          Length = 546

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       +    LG+++ +F T          F +K G  +  +
Sbjct: 310 WNQYGDMFLRGAGLTLFIALIGTIVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 369

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I  S  T A+++
Sbjct: 370 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFIV-SVNTGAYMS 417

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 418 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 477

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 478 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 527



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G I  T +G L+G  R              KL   I  +Y+
Sbjct: 312 QYGDMFLRGAGLTLFIALIGTIVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 371

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 372 EVFRGTPMMVQAMVIFYGLALAF 394


>gi|315036620|gb|EFT48552.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
          Length = 546

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 310 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 369

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I  S  T A+++
Sbjct: 370 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFIV-SVNTGAYMS 417

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 418 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 477

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 478 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 527



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 312 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 371

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 372 EVFRGTPMMVQAMVIFYGLALAF 394


>gi|324115108|gb|EGC09073.1| ABC transporter [Escherichia fergusonii B253]
          Length = 506

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                     +  N+         +  +   + FS VLG +L+L     ++    K    
Sbjct: 1   MTFDWNYMLSLLSNHDFWQATWTVIKLSLLTWFFSIVLGFILAL-----AKQSPRKLFNT 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    +P LVL+   Y L    P L        S ++  F +  IA+    A
Sbjct: 56  PARIYIWLF--RSIPLLVLLIFVYNLPQAMPSL-------ASILNDPFRAGLIAMVLCEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI R GL+++P+GQ EAA ALG+ +      V++PQA+R  +P L ++Y+ ++K S
Sbjct: 107 AYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQWRVVIPQALRVALPALANEYIAIVKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + ++
Sbjct: 167 SLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVFIVTVFDFLLKRLEKYLEVTQR 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                     L+      + ++G ++   + S  KL     R+Y+ +FR+IP LV++ F+
Sbjct: 17  FWQATWTVIKLSLLTWFFSIVLGFILALAKQSPRKLFNTPARIYIWLFRSIPLLVLLIFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVL 200
           Y  +   +P     +  PF   L    L       + +    +         +  LG+  
Sbjct: 77  YN-LPQAMPSLASILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRY 135

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGG 259
           +    R+      +   ALP L      I  L +LV +I+L   L   + +  Q   +  
Sbjct: 136 AGTQWRVVIPQALRV--ALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVME 193

Query: 260 STVSPEFMSLYIALSC 275
           +  +  F  ++I    
Sbjct: 194 TMAAVAFYYVFIVTVF 209


>gi|296877417|ref|ZP_06901454.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431578|gb|EFH17388.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 520

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 13/223 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY---ISTFLI 229
            + L    +T+  +    +   ++G+++ +F T          G      +   +   + 
Sbjct: 290 PQFLRGTGMTLLISMTGTIAGLIIGLLIGVFRTAPKAKNKFLAGCQTAFGWFLNVYIEIF 349

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V   + +           FN     T      +    +S  T A+++EIVR G+
Sbjct: 350 RGTPMIVQSMVIFYGSAQA-----FNISLDRT-----WAAIFIVSINTGAYMSEIVRGGI 399

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AV  GQ EAA ALG+TH +  R V+LPQ +R+I+P   +++   +K++S+   +   +L
Sbjct: 400 LAVDPGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFGINIKDTSVLNVISVVEL 459

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G T+  Q  Q      I   IY  L+  I   +  +  ++
Sbjct: 460 YFTGNTVATQNYQYFPTFTIIAVIYFVLTFTITRILRYIERRL 502



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 10/78 (12%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVEVFRN 138
            L G   T  ++ +G I   IIG L+G  R +                W   VY+E+FR 
Sbjct: 292 FLRGTGMTLLISMTGTIAGLIIGLLIGVFRTAPKAKNKFLAGCQTAFGWFLNVYIEIFRG 351

Query: 139 IPPLVVIFFLYKSVLSVL 156
            P +V    ++       
Sbjct: 352 TPMIVQSMVIFYGSAQAF 369


>gi|319945586|ref|ZP_08019838.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319748185|gb|EFW00427.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 520

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 7/220 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L    +T+  +    +   ++G+++ +F T         T K   L  +  F  + L
Sbjct: 290 PQFLRGTGMTLLISMTGTIAGLIIGLLIGVFRTA-------PTSKNKALAALQKFFGWFL 342

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
              + I     +     V+   +    +       +    +S  T A+++EIVR G++AV
Sbjct: 343 NVYIEIFRGTPMIVQSMVIFYGSAQAFNISLDRTWAAIFIVSINTGAYMSEIVRGGILAV 402

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++  +K++S+   +   +L   
Sbjct: 403 DTGQFEAATALGMTHGQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFT 462

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G T+  Q  Q      I   IY  L+  I   +  +  ++
Sbjct: 463 GNTVATQNYQYFPTFTIIAVIYFILTFTITRILRYIERRL 502



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 10/78 (12%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEVFRN 138
            L G   T  ++ +G I   IIG L+G  R +            K   W   VY+E+FR 
Sbjct: 292 FLRGTGMTLLISMTGTIAGLIIGLLIGVFRTAPTSKNKALAALQKFFGWFLNVYIEIFRG 351

Query: 139 IPPLVVIFFLYKSVLSVL 156
            P +V    ++       
Sbjct: 352 TPMIVQSMVIFYGSAQAF 369


>gi|294814953|ref|ZP_06773596.1| permease [Streptomyces clavuligerus ATCC 27064]
 gi|294327552|gb|EFG09195.1| permease [Streptomyces clavuligerus ATCC 27064]
          Length = 351

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 4/252 (1%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +   +  ++        + +G              +     + V S  +GI   +    +
Sbjct: 78  VAIGLFGLIVYAFSQGRINWGAIPEYFFDDRIVDGVKETLILTVLSMAIGIGGGILL-AV 136

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEF 266
            R        ++   YI  F   G P LV + + + L      V   F     S     F
Sbjct: 137 MRLSKNPVTSSIAWFYIWFF--RGTPVLVQLFVWFNLGLVFEYVNFGFYRDEWSDFMTPF 194

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  + L    AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+PP
Sbjct: 195 LTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHSKTLRRIVIPQAMRVIVPP 254

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             ++ +N+LK +SL  AV F +L      I   +G  +E+  +    YL L+ ++++   
Sbjct: 255 TGNEVINMLKTTSLVAAVQFTELFRQAQNIGQTSGAPVEMFFLAAAWYLVLTSVLSVGQY 314

Query: 387 RLNAKIALKEKK 398
            L    A    +
Sbjct: 315 YLERHYARGSTR 326



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     I+ G   T  L    M      G L+   RLS N + + 
Sbjct: 88  YAFSQGRINWGAIPEYFFDDRIVDGVKETLILTVLSMAIGIGGGILLAVMRLSKNPVTSS 147

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVL 153
           I   Y+  FR  P LV +F  +   L
Sbjct: 148 IAWFYIWFFRGTPVLVQLFVWFNLGL 173


>gi|325498437|gb|EGC96296.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Escherichia fergusonii ECD227]
          Length = 506

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                     +  N+         +  +   + FS VLG +L+L     ++    K    
Sbjct: 1   MTFDWNYMLSLLSNHDFWQATWTVIKLSLLTWFFSIVLGFILAL-----AKQSPRKLFNT 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    +P LVL+   Y L    P L        S ++  F +  IA+    A
Sbjct: 56  PARIYIWLF--RSIPLLVLLIFVYNLPQAMPSL-------ASILNDPFRAGLIAMVLCEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI R GL+++P+GQ EAA ALG+ +      V++PQA+R  +P L ++Y+ ++K S
Sbjct: 107 AYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQWRVVIPQALRVALPALANEYIAIVKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + ++
Sbjct: 167 SLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVFIVTVFDFLLKRLEKYLDVTQR 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                     L+      + ++G ++   + S  KL     R+Y+ +FR+IP LV++ F+
Sbjct: 17  FWQATWTVIKLSLLTWFFSIVLGFILALAKQSPRKLFNTPARIYIWLFRSIPLLVLLIFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVL 200
           Y  +   +P     +  PF   L    L       + +    +         +  LG+  
Sbjct: 77  YN-LPQAMPSLASILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRY 135

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGG 259
           +    R+      +   ALP L      I  L +LV +I+L   L   + +  Q   +  
Sbjct: 136 AGTQWRVVIPQALRV--ALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVME 193

Query: 260 STVSPEFMSLYIALSC 275
           +  +  F  ++I    
Sbjct: 194 TMAAVAFYYVFIVTVF 209


>gi|161170239|gb|ABX59210.1| ABC-type amino acid transport system permease component [uncultured
           marine group II euryarchaeote EF100_57A08]
          Length = 626

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 195/383 (50%), Gaps = 13/383 (3%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVY--------NNMEKSNLSLGIGFLSERAGFEI 72
           + ++ +  +  +  L+LT    + V  V           ME+ N+     F+++   F+I
Sbjct: 241 NPKIQDQRMSALGFLILTPFIFYIVTRVMYVFHDPNTVTMERWNIE--FAFMNDANPFQI 298

Query: 73  DQGIVPYTSD-SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +   +  T++        +   +N+  +    ++  TI+G +VG  RLS+NKL + +   
Sbjct: 299 NTWPIEVTNNIDDRWRFWIAALLNSIRVTLLSIVFCTILGIIVGVSRLSSNKLTSSMATA 358

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           YVE+FRN+P  V++F +   + + LP+      +   ++ +N+G+  P   +      F+
Sbjct: 359 YVEIFRNMPLAVLLFLISTQLGTTLPLFIAEENIVGMIYYSNQGIYLPGFELSHLIYGFL 418

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFDKP 249
             F + +   +          E   +   +  I   +  G+     I+L   +  +   P
Sbjct: 419 IVFAIWVYWQIKDREGVDDSEEGVRRRFTIWVIGIAVALGIILSGDISLPNYIKPNMGIP 478

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                    G  ++ EF+++ I L+ +T A +AEIVR  + ++PRGQ+EAA+++GL+  +
Sbjct: 479 GTWDIEEGTGFEMTVEFLAMIIGLTLFTTAVVAEIVRGSIQSLPRGQVEAAVSIGLSPYQ 538

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA+RS+IP L SQY+N+ KNSSLA+ V ++D+  V   ++N  G+ I + ++
Sbjct: 539 RLRLVILPQALRSMIPLLNSQYMNVWKNSSLAMIVAYSDVFYVIFVMMNNVGKLIPLFIL 598

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
            +  Y + S++I+  MN  N ++
Sbjct: 599 LLLTYQAGSLLISGIMNVYNYRV 621


>gi|218550123|ref|YP_002383914.1| Amino acid ABC transporter permease [Escherichia fergusonii ATCC
           35469]
 gi|218357664|emb|CAQ90305.1| putative Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Escherichia fergusonii ATCC
           35469]
          Length = 506

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                     +  N+         +  +   + FS VLG +L+L     ++    K    
Sbjct: 1   MTFDWNYMLSLLSNHDFWQATWTVIKLSLLTWFFSIVLGFILAL-----AKQSPRKLFNT 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    +P LVL+   Y L    P L        S ++  F +  IA+    A
Sbjct: 56  PARIYIWLF--RSIPLLVLLIFVYNLPQAMPSL-------ASILNDPFRAGLIAMVLCEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI R GL+++P+GQ EAA ALG+ +      V++PQA+R  +P L ++Y+ ++K S
Sbjct: 107 AYIAEIHRGGLLSIPKGQSEAARALGMRYAGTQWRVVIPQALRVALPALANEYIAIVKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + ++
Sbjct: 167 SLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVFIVTVFDFLLKRLEKYLDVTQR 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                     L+      + ++G ++   + S  KL     R+Y+ +FR+IP LV++ F+
Sbjct: 17  FWQATWTVIKLSLLTWFFSIVLGFILALAKQSPRKLFNTPARIYIWLFRSIPLLVLLIFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVL 200
           Y  +   +P     +  PF   L    L       + +    +         +  LG+  
Sbjct: 77  YN-LPQAMPSLASILNDPFRAGLIAMVLCEAAYIAEIHRGGLLSIPKGQSEAARALGMRY 135

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGG 259
           +    R+      +   ALP L      I  L +LV +I+L   L   + +  Q   +  
Sbjct: 136 AGTQWRVVIPQALRV--ALPALANEYIAIVKLSSLVSVISLTEILMVGQRLYSQNFLVME 193

Query: 260 STVSPEFMSLYIALSC 275
           +  +  F  ++I    
Sbjct: 194 TMAAVAFYYVFIVTVF 209


>gi|163789533|ref|ZP_02183971.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7]
 gi|159875065|gb|EDP69131.1| hypothetical protein CAT7_08825 [Carnobacterium sp. AT7]
          Length = 483

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                F+ + +LG++  LF+   ++           L +I+T  +  L  + LI L + +
Sbjct: 290 LTITAFIIATILGVIFGLFSASPNKV----------LNWIATIYVDILRGIPLIVLAFFI 339

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P          +   P +++  I LS  T A+IAE+VR G+ AV  GQ+EA+ +LG
Sbjct: 340 YFSIPQF-------LNIQIPAYLAGVITLSLNTTAYIAELVRGGIQAVDNGQLEASRSLG 392

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT+  + R V+LPQA++ +IP   +Q++  LK++S+   +G  +L   G  II +T  + 
Sbjct: 393 LTYNTSMRKVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSG 452

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++ LI   +Y+ +  ++  F N L  +++
Sbjct: 453 DMWLIVGLMYIIIITILTKFSNYLERRLS 481



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 3/114 (2%)

Query: 44  CVNNVYNNMEKSNLSLGI--GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF 101
             NN   N+  +     I   +L E +  E    +  +         +L G   T  L  
Sbjct: 234 MFNNGLINIRANGTYDDILDTYLGETSQTETA-NLGFFGLIQQNGGELLKGLGRTLLLTI 292

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  I ATI+G + G    S NK++ WI  +YV++ R IP +V+ FF+Y S+   
Sbjct: 293 TAFIIATILGVIFGLFSASPNKVLNWIATIYVDILRGIPLIVLAFFIYFSIPQF 346


>gi|312958495|ref|ZP_07773015.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311287038|gb|EFQ65599.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 319

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 116/224 (51%), Gaps = 15/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +  L      + T   +   S +LG+ + L AT L R     T + L  +Y+   L+ G 
Sbjct: 111 HWALGPLMWGLWTTLWLSAVSGILGLAIGL-ATGLCRLSSNPTLRDLSTIYVE--LVRGT 167

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y             FIG         +   ALS +T A++AEIVR+G+ ++
Sbjct: 168 PLLVQIFIFY------------FFIGTVLNLSREFAGIAALSLFTGAYVAEIVRAGVQSI 215

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA +LGL+  ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L+  
Sbjct: 216 TRGQNEAARSLGLSAGQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKS 275

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  +I  +    EI+     +YL +++ ++   +RL  ++A  +
Sbjct: 276 GREVITTSFSPFEILFCVAGLYLLINLPLSKMASRLERRLAQSD 319



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T WL+    I    IG   G  RLS+N  +  +  +YVE+ R  P LV IF  
Sbjct: 117 LMWGLWTTLWLSAVSGILGLAIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 176

Query: 149 YKSV 152
           Y  +
Sbjct: 177 YFFI 180


>gi|299822330|ref|ZP_07054216.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299815859|gb|EFI83097.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 496

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+       + + ++G+V         +    +  + +  +Y+  F   G
Sbjct: 290 WPALLAGLWYTIRLTVLSLLIALIIGVVFGFM-----KVSQNRIVRGIATVYVDIF--RG 342

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV     + ++F  P    F         P F++  +ALS    A++ EIVR G+ +
Sbjct: 343 TPLLVQ---AFFIYFGIPQALDF-------RMPAFLAALLALSLNAGAYMVEIVRGGIQS 392

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL +RK+   ++LPQA+R++IP   +Q++  LK++S+   +G  +L  
Sbjct: 393 VDSGQMEAARSLGLPYRKSMIKIVLPQAIRTMIPSFINQFVITLKDTSIMSVIGLVELTQ 452

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +T Q+ +I LI   +YL +  ++    +R+  ++ 
Sbjct: 453 SGKIIIARTFQSFDIWLIVALMYLIVITILTKVSDRVERRLR 494



 Score = 66.9 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  L    ++ A IIG + G  ++S N++V  I  VYV++FR  P LV  
Sbjct: 290 WPALLAGLWYTIRLTVLSLLIALIIGVVFGFMKVSQNRIVRGIATVYVDIFRGTPLLVQA 349

Query: 146 FFLYKSVLSV 155
           FF+Y  +   
Sbjct: 350 FFIYFGIPQA 359


>gi|239626406|ref|ZP_04669437.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239516552|gb|EEQ56418.1| glutamine ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 281

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 15/237 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D   ++               +T+        F+ +LG++  LF     +    K  K +
Sbjct: 54  DSMQIINVLTQYYPSFFKALGVTLQMTVISLFFATILGVIFGLF-----KVSDFKALKFI 108

Query: 220 PLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             +YI   +I G P LV + + Y       +P   Q+N IGG      F +  + LS   
Sbjct: 109 ANIYID--IIRGTPLLVQVFIMYYGVGSMLRPYGFQWNMIGG-----AFSAGCVTLSLNA 161

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AEI+R G+ AV +GQMEAA +LGL++ KA R V+LPQA R+++P + +Q++  LK+
Sbjct: 162 GAYMAEIIRGGIEAVDKGQMEAARSLGLSYGKAMRKVILPQAFRTMLPTIINQFIISLKD 221

Query: 338 SSLAVAVGFADLVSVGGTI-INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +SL   +G  +L      I  N +   + I L     YL +  +++     +  +++
Sbjct: 222 TSLISVIGPRELTQNSKIIAANASSMVMPIYLSVAIFYLVICTILSRVAKYVERRVS 278



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 39/87 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y  +       T  +    +  ATI+G + G  ++S  K + +I  +Y+++ R  P LV
Sbjct: 64  QYYPSFFKALGVTLQMTVISLFFATILGVIFGLFKVSDFKALKFIANIYIDIIRGTPLLV 123

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            +F +Y  V S+L        +  G F
Sbjct: 124 QVFIMYYGVGSMLRPYGFQWNMIGGAF 150


>gi|225375503|ref|ZP_03752724.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM
           16841]
 gi|225212638|gb|EEG94992.1| hypothetical protein ROSEINA2194_01128 [Roseburia inulinivorans DSM
           16841]
          Length = 414

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 120/235 (51%), Gaps = 16/235 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F+ +   ++    +     I +F+ ++GIVL  F   + R  H++ G    L  + 
Sbjct: 193 FYQNFIQDNRYAYMLKGLGNTLIITIFAVMIGIVLG-FLIAIVRTSHDRNGGLGILNAVC 251

Query: 226 ---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I G P ++ + + Y + F             S  + + +   IA    +AA++A
Sbjct: 252 KAYLTIIRGTPVMIQLLIIYYVIFQ------------SINTGKIVVAVIAFGLNSAAYVA 299

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVRSG++AV  GQ EA  +LGL +R+    ++LPQA+++I+P L +++++LLK +S++ 
Sbjct: 300 EIVRSGIMAVDIGQFEAGRSLGLNYRQTMTTIILPQAVKNILPALCNEFISLLKETSISG 359

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  DL   G  I + T +A   ++    IYL + + ++  +  L  K+   E+
Sbjct: 360 YIGLMDLTKGGDIIRSVTYEAFMPLIAVAVIYLLMVVGLSKAVGVLERKLRNNER 414



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYV 133
           +  D+ YA  +L G  NT  +    ++   ++G L+   R S ++     ++  +C+ Y+
Sbjct: 197 FIQDNRYA-YMLKGLGNTLIITIFAVMIGIVLGFLIAIVRTSHDRNGGLGILNAVCKAYL 255

Query: 134 EVFRNIPPLVVIFFLYKSVLSV 155
            + R  P ++ +  +Y  +   
Sbjct: 256 TIIRGTPVMIQLLIIYYVIFQS 277


>gi|256829598|ref|YP_003158326.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578774|gb|ACU89910.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 334

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 5/222 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +          +    ++   + V GI+L LF   L+R       +   + YI   LI
Sbjct: 116 FYSETKPGILIEGLLLTLEVSALAIVFGILLGLFTG-LARISDNPALRWGAIAYIE--LI 172

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV I L Y +     V+       G    P      +AL+ +T A+ AEIVR+G+
Sbjct: 173 RGSPLLVQIFLWYFV--VGTVINSMLSQYGIGQIPPLWFGVMALAIFTGAYTAEIVRAGI 230

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V RGQMEAA +LG+T+ KA R V+LPQA R I+PPL  Q+++L+K+SSL   +   +L
Sbjct: 231 QSVHRGQMEAARSLGMTYNKAMRKVILPQAFRRILPPLAGQFISLVKDSSLLGVISIREL 290

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 +++ + Q  EI ++   +YL L+  +++F+  L  K
Sbjct: 291 TKASREVVSSSLQPFEIWIVCAILYLVLTFTLSMFVQYLERK 332



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 34/75 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  ++   ++   ++G   G  R+S N  + W    Y+E+ R  P LV IF  
Sbjct: 125 LIEGLLLTLEVSALAIVFGILLGLFTGLARISDNPALRWGAIAYIELIRGSPLLVQIFLW 184

Query: 149 YKSVLSVLPIPDHSI 163
           Y  V +V+       
Sbjct: 185 YFVVGTVINSMLSQY 199


>gi|283853410|ref|ZP_06370656.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283571223|gb|EFC19237.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 269

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 113/233 (48%), Gaps = 15/233 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F      R   F    +    ++ V S  L +V  L    L R    K    +   Y+ 
Sbjct: 52  YFKPDPYLRIFKFVPDGILVTFQVTVCSIALALVFGLVTG-LGRISRNKHINLIASTYVE 110

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             ++ G+P LV +   Y              +G     P+ ++  +++S    A++ E+ 
Sbjct: 111 --IVRGVPLLVQLFYIYY------------ALGRFVHVPDLLAAVLSMSVCYGAYMGEVF 156

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+IA+P GQ EAA +LG    +    V+LPQA R+I+PP+ ++++ LLK++SL   +G
Sbjct: 157 RAGIIAIPVGQTEAARSLGFNRAQTMYHVILPQAWRTILPPVGNEFIALLKDTSLVSILG 216

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ADL+  G    +++ Q  E   +   IYL ++++++  ++ +  +++   K+
Sbjct: 217 VADLLRRGREYASESFQYFETFTMVAVIYLIITLILSKLVSIMEERLSHHVKR 269



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 79  YTSDSSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           Y     Y         G + TF +    +  A + G + G GR+S NK +  I   YVE+
Sbjct: 52  YFKPDPYLRIFKFVPDGILVTFQVTVCSIALALVFGLVTGLGRISRNKHINLIASTYVEI 111

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPD 160
            R +P LV +F++Y ++   + +PD
Sbjct: 112 VRGVPLLVQLFYIYYALGRFVHVPD 136


>gi|259047073|ref|ZP_05737474.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein/permease protein [Granulicatella adiacens ATCC
           49175]
 gi|259036123|gb|EEW37378.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein/permease protein [Granulicatella adiacens ATCC
           49175]
          Length = 478

 Score =  172 bits (437), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 17/211 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+       +F+ ++GI+  L      +       +A+   YI T  I G+P +V   
Sbjct: 282 WNTIVLTVVALIFASLIGIIFGLI-----KTSQNSIVQAIAGFYIDT--IRGVPLIV--- 331

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L + ++F  P                F++  I LS   +A+IAEI+R G+ AV +GQ EA
Sbjct: 332 LTFFIYFGIPQAF-------DITMQPFVAGVITLSLNASAYIAEIIRGGIQAVDKGQYEA 384

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            ++LGL + K+ + V+LPQA+R ++P   +Q++  LK++S+   +G A+L   G  II +
Sbjct: 385 CMSLGLPYSKSMQKVILPQAIRIMVPSFINQFVITLKDTSILSIIGIAELTQTGKVIIAR 444

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             Q+ ++ LI   +YL + +++      L  
Sbjct: 445 NLQSSQMWLIVGVMYLIVIVLLTKLSAHLER 475



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 35/73 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +  G  NT  L    +I A++IG + G  + S N +V  I   Y++  R +P +V
Sbjct: 272 TNWKTLATGLWNTIVLTVVALIFASLIGIIFGLIKTSQNSIVQAIAGFYIDTIRGVPLIV 331

Query: 144 VIFFLYKSVLSVL 156
           + FF+Y  +    
Sbjct: 332 LTFFIYFGIPQAF 344


>gi|229551216|ref|ZP_04439941.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315379|gb|EEN81352.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 566

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 13/234 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL- 219
           +  +          L    +T+  +    +  F++G+++ +  T    +   ++  +A+ 
Sbjct: 317 NWFMAIMKQYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 376

Query: 220 -PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             LL +   +  G P +V  A+ Y        L                +  + +S  T 
Sbjct: 377 NWLLSVYIEVFRGTPMIVQAAVLYYGAAQAWHLN----------MDRTTAALLIVSINTG 426

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++  +K++
Sbjct: 427 AYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDT 486

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+     +   +
Sbjct: 487 SVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTISRLFRLIEKHL 540



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   +L G   T  ++  G +   IIG LVG  R +             ++ W+  VY+
Sbjct: 325 QYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVINWLLSVYI 384

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    LY        
Sbjct: 385 EVFRGTPMIVQAAVLYYGAAQAWH 408


>gi|218282661|ref|ZP_03488876.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989]
 gi|218216424|gb|EEC89962.1| hypothetical protein EUBIFOR_01462 [Eubacterium biforme DSM 3989]
          Length = 538

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 122/227 (53%), Gaps = 17/227 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +   + L    +T+   A   +F  ++G + +L      +    K  +A+  +Y+   LI
Sbjct: 329 YCWPQLLKGLGVTLGLAAITVIFGTIIGGLFALV-----KLSKNKIVQAIAGVYVE--LI 381

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L   +         F+++      P  +S+ IAL   ++A++AEI+RSG+
Sbjct: 382 RGTPLLLQLWLFINI---------FSYLTNGK-MPMIVSVIIALIINSSAYVAEIIRSGI 431

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V +GQ EAA +LG+++      +++PQA+++I+P L ++++ ++K +SLA      +L
Sbjct: 432 QSVDKGQREAAKSLGMSNVHMMTKIIIPQAIKNILPALGNEFVMMIKETSLASTFYIGEL 491

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++V   I + T ++IE ++I   IY  ++  ++  +  +  K+++ +
Sbjct: 492 MTVNSVIKSATYKSIEPLVIVGLIYFIVTYSLSKLIKYMEGKLSVSD 538



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 32/67 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  LA   +I  TIIG L    +LS NK+V  I  VYVE+ R  P L+ +
Sbjct: 331 WPQLLKGLGVTLGLAAITVIFGTIIGGLFALVKLSKNKIVQAIAGVYVELIRGTPLLLQL 390

Query: 146 FFLYKSV 152
           +      
Sbjct: 391 WLFINIF 397


>gi|46579380|ref|YP_010188.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603064|ref|YP_967464.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris DP4]
 gi|46448794|gb|AAS95447.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563293|gb|ABM29037.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311233203|gb|ADP86057.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 337

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + + ++GIVL +    L+R       + L + YI   +I G P LV + L Y 
Sbjct: 132 WITLEVSMLAIIIGIVLGVVTG-LARISVNPALRWLAITYIE--IIRGSPLLVQVFLWYF 188

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +L       G +  P      +AL+ +T A++AEIVR+G+ +V RGQMEAA +L
Sbjct: 189 V--VGTLLNALFEKVGLSAIPPLWYGVMALAIFTGAYVAEIVRAGIQSVHRGQMEAARSL 246

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ ++ R V+LPQA R I+PPL  Q+++L+K+SSL   +   +L      ++  + Q 
Sbjct: 247 GMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKATREVVTTSLQP 306

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E+ ++   +YL L+  ++L +  L  +
Sbjct: 307 FELWIVCALLYLVLTFTLSLCVQYLERR 334



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +I   ++G + G  R+S N  + W+   Y+E+ R  P LV +F  
Sbjct: 127 LLEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAITYIEIIRGSPLLVQVFLW 186

Query: 149 YKSV 152
           Y  V
Sbjct: 187 YFVV 190


>gi|90413902|ref|ZP_01221888.1| hypothetical amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90325086|gb|EAS41596.1| hypothetical amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 315

 Score =  172 bits (436), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 15/213 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI V S    +++ L A  L R  +    K L  LY+   +I G P LV I + Y 
Sbjct: 118 WVTLKISVISLFFAVIIGLVAG-LMRISNNPVTKNLSFLYVE--IIRGTPLLVQIFIVY- 173

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F+G       F +  +ALS +T A+IAEI+RSG+ ++P GQMEAA +L
Sbjct: 174 -----------FFLGTIFDLERFTAGVVALSVFTGAYIAEIIRSGIQSIPPGQMEAARSL 222

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ + KA   V+LPQA +  +PP+  Q + L+K+SSL   +   DL   G  +I+ +   
Sbjct: 223 GMNYPKAMAYVILPQAFKRTLPPMAGQLITLIKDSSLVSVISITDLTKAGREVISGSFAT 282

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            E+  +   +YL L+I ++  + R+  ++A  +
Sbjct: 283 FEVWFVVAGLYLLLTISLSWVVQRIEKRLASSD 315



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++VG   T  ++   +  A IIG + G  R+S N +   +  +YVE+ R  P LV IF +
Sbjct: 113 LIVGLWVTLKISVISLFFAVIIGLVAGLMRISNNPVTKNLSFLYVEIIRGTPLLVQIFIV 172

Query: 149 YK 150
           Y 
Sbjct: 173 YF 174


>gi|322387683|ref|ZP_08061292.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus infantis ATCC 700779]
 gi|321141550|gb|EFX37046.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus infantis ATCC 700779]
          Length = 481

 Score =  172 bits (436), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 125/250 (50%), Gaps = 11/250 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++  +L     +     D + +         + LS   +T+      F  + V+GI+  +
Sbjct: 242 ILDKYLASDSTTTSSTADETTIWGLLKNNYRQLLSGLGITLALALVSFAIAIVIGIIFGM 301

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F+         K  + +  +++   +I G+P ++L A  +      P   + +  G  + 
Sbjct: 302 FS-----VSPYKPLRLIAEIFVD--VIRGIPLMILAAFIFW---GIPNFIE-SLTGQQSP 350

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
             +F++  IALS  +AA+IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA + 
Sbjct: 351 INDFVAGTIALSLNSAAYIAEIVRGGIKAVPVGQMEASRSLGISYGKTMRKIVLPQATKL 410

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++  I    YL +  ++ 
Sbjct: 411 MLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKMYAILAVFYLVIITLLT 470

Query: 383 LFMNRLNAKI 392
               RL  +I
Sbjct: 471 RLAKRLEKRI 480



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++ 
Sbjct: 271 YRQLLSGLGITLALALVSFAIAIVIGIIFGMFSVSPYKPLRLIAEIFVDVIRGIPLMILA 330

Query: 146 FFLY 149
            F++
Sbjct: 331 AFIF 334


>gi|116496256|ref|YP_807990.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|191639782|ref|YP_001988948.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus casei BL23]
 gi|227532749|ref|ZP_03962798.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|116106406|gb|ABJ71548.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|190714084|emb|CAQ68090.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein [Lactobacillus casei BL23]
 gi|227189583|gb|EEI69650.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 532

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 17/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG 216
           +  +          L    +T+  +    +  F++G+++ +        +L +       
Sbjct: 283 NWFIAIMKQYGPMLLRGTGMTLLISLVGTIVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 342

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             L  LYI  F   G P +V  A+ Y        L                +  + +S  
Sbjct: 343 NWLLSLYIEVF--RGTPMIVQAAVLYYGAAQAWHLN----------MDRTTAALLIVSIN 390

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++  +K
Sbjct: 391 TGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIK 450

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+     +   +
Sbjct: 451 DTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSAIYLIMTFTISRLFRLIEKHL 506



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   +L G   T  ++  G I   IIG LVG  R +             ++ W+  +Y+
Sbjct: 291 QYGPMLLRGTGMTLLISLVGTIVGFIIGLLVGIIRTTPKPKKLGQRGLRAVINWLLSLYI 350

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    LY        
Sbjct: 351 EVFRGTPMIVQAAVLYYGAAQAWH 374


>gi|282165413|ref|YP_003357798.1| putative amino acid ABC transporter permease protein [Methanocella
           paludicola SANAE]
 gi|282157727|dbj|BAI62815.1| putative amino acid ABC transporter permease protein [Methanocella
           paludicola SANAE]
          Length = 442

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 111/214 (51%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + +  +G+V+ L    L R       +A+  +Y+    I GLP L+ +     +
Sbjct: 219 VTIQLSLVAMSIGLVIGLVMG-LGRVSTNFLFRAVASIYVE--GIRGLPILLQLLF---V 272

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P L   +  GG      F +  IALS  + A++ EI + G+ AV +GQMEAA +LG
Sbjct: 273 NFGLPFLIS-DLTGGQFNIDGFTACVIALSINSGAYMGEIFKGGIEAVHKGQMEAARSLG 331

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L++ ++   ++LPQA + ++P L ++++ L+K+SS+ + +   ++V    +I  +     
Sbjct: 332 LSYNQSMLFIILPQAFKIVLPTLGNEFIALIKDSSIGMVISVMEVVWWSKSIGAEYYNTF 391

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +L    +YL ++I +   +  +  K +++  +
Sbjct: 392 TPLLAAGMVYLCITIPLGRAVQYIEKKYSVQNTR 425



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L+   M    +IG ++G GR+S N L   +  +YVE  R +P L+ + F+   
Sbjct: 216 GLLVTIQLSLVAMSIGLVIGLVMGLGRVSTNFLFRAVASIYVEGIRGLPILLQLLFVNFG 275

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  ++           G       LS  +    
Sbjct: 276 LPFLISDLTGGQFNIDGFTACVIALSINSGAYM 308


>gi|326797152|ref|YP_004314972.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326547916|gb|ADZ93136.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 315

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 19/217 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            +T+  +    +FS +LG++  L      R  H +  + L + Y+   +I G P LV I 
Sbjct: 118 WVTIKISFISLIFSIILGLIFGLM-----RISHRQVLRNLAVTYVE--VIRGTPLLVQIF 170

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + Y             FIG       F +   ALS +T A++AEIVR+G+ AVP GQMEA
Sbjct: 171 IVY------------FFIGTVFDLDRFTAGVAALSIFTGAYVAEIVRAGIQAVPTGQMEA 218

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LG+ + +A   V++PQA++  +PPL  Q++NL+K+SSL   +   DL   G  +++ 
Sbjct: 219 ARSLGMNYVQAMCYVVMPQAIKRTLPPLAGQFINLIKDSSLVSVISITDLTKAGREVVSG 278

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    E+      +YL ++  ++  +  L  +++  +
Sbjct: 279 SFAPFEVWFTVAALYLVVTGALSWAIQILEQRLSASD 315



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++F  +I + I+G + G  R+S  +++  +   YVEV R  P LV IF +Y  
Sbjct: 116 GLWVTIKISFISLIFSIILGLIFGLMRISHRQVLRNLAVTYVEVIRGTPLLVQIFIVYFF 175

Query: 152 VLSVL 156
           + +V 
Sbjct: 176 IGTVF 180


>gi|295397425|ref|ZP_06807512.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294974326|gb|EFG50066.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 727

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 13/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + S V+  +L +F   L R         +  +YI       +  L LI + + +
Sbjct: 526 TTVYLAIVSLVIATILGIFLG-LMRTSGNVVLSGIATVYIDI-----MRGLPLIVMSFFI 579

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P +               ++  + LS   AA++ EIVR G+ A+  GQ EAA +LG
Sbjct: 580 YFGIPQMFNITISSN-------LAGILTLSLNAAAYMGEIVRGGIQAIDTGQTEAARSLG 632

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT+ +  R ++LPQA++ ++P   +Q++  LK++S+   +G  +L   G  II +T Q+ 
Sbjct: 633 LTNGQTMRHIILPQAVKVMVPSFINQFVITLKDTSILSVIGIVELTQTGRIIIARTYQSG 692

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + LI   +Y+ +  ++    N +  + 
Sbjct: 693 SMWLIVGLMYIIIITILTKLSNYIEKRY 720



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 41/69 (59%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T +LA   ++ ATI+G  +G  R S N +++ I  VY+++ R +P +V+ FF
Sbjct: 519 ALLSGLGTTVYLAIVSLVIATILGIFLGLMRTSGNVVLSGIATVYIDIMRGLPLIVMSFF 578

Query: 148 LYKSVLSVL 156
           +Y  +  + 
Sbjct: 579 IYFGIPQMF 587


>gi|295426255|ref|ZP_06818916.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter [Lactobacillus amylolyticus DSM
           11664]
 gi|295064100|gb|EFG55047.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter [Lactobacillus amylolyticus DSM
           11664]
          Length = 536

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 17/278 (6%)

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           S  KL+  +  +   +       ++   + +   +       + ++       N  LS  
Sbjct: 246 SNTKLLKQVNAILKTIPTKKRNQLMATAIKQQPKAGSSAKKENWLISTWKQYGNMILSGV 305

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +T+       V  F +G+++ +  T        + +     K L  +Y+  F   G P 
Sbjct: 306 GMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWGLNIAKWLLSVYVEVF--RGTPM 363

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V  A+ Y        + QF  +  +      ++  I +S  T A++AE++R G+I+ P 
Sbjct: 364 MVQAAVIYY------GIAQFWHLNLNRT----VAALIIVSINTGAYLAEVIRGGIISTPE 413

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALG+TH +    ++LPQA+++ +P +T++++  +K++S+   +  ++L  VG 
Sbjct: 414 GQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNEFIVNIKDTSVLSIISVSELFFVGT 473

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           TI +QT Q     L    IYL L+  I    N +  ++
Sbjct: 474 TIASQTFQFFPTYLTISAIYLVLTFTITRIFNFIEKRL 511



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA----------WICRVYV 133
            Y   IL G   T  LA  G +    IG LVG  R                  W+  VYV
Sbjct: 296 QYGNMILSGVGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWGLNIAKWLLSVYV 355

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +     
Sbjct: 356 EVFRGTPMMVQAAVIYYGIAQFWH 379


>gi|239630711|ref|ZP_04673742.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|301067862|ref|YP_003789885.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|239526994|gb|EEQ65995.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|300440269|gb|ADK20035.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
 gi|327383896|gb|AEA55372.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei LC2W]
 gi|327387077|gb|AEA58551.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei BD-II]
          Length = 535

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 17/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG 216
           +  +          L    +T+  +    +  F++G+++ +        +L +       
Sbjct: 286 NWFIAIMKQYGPMLLRGTGMTLLISLVGTIVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 345

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             L  LYI  F   G P +V  A+ Y        L                +  + +S  
Sbjct: 346 NWLLSLYIEVF--RGTPMIVQAAVLYYGAAQAWHLN----------MDRTTAALLIVSIN 393

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++  +K
Sbjct: 394 TGAYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIK 453

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+     +   +
Sbjct: 454 DTSVLSVISVSELFFSGETIAGQSFQFFHTYLIVSAIYLIMTFTISRLFRLIEKHL 509



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   +L G   T  ++  G I   IIG LVG  R +             ++ W+  +Y+
Sbjct: 294 QYGPMLLRGTGMTLLISLVGTIVGFIIGLLVGIIRTTPKPKKLGQRGLRAVINWLLSLYI 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    LY        
Sbjct: 354 EVFRGTPMIVQAAVLYYGAAQAWH 377


>gi|270292808|ref|ZP_06199019.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M143]
 gi|270278787|gb|EFA24633.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus sp. M143]
          Length = 482

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 111/207 (53%), Gaps = 7/207 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF + IV+ +     S     K+ + +  +++   +I G+P ++L A  +    
Sbjct: 283 LALALISFAIAIVIGIIFGMFS-VSPYKSLRLISEIFVD--VIRGIPLMILAAFIFW--- 336

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P   + +  G  +   +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG++
Sbjct: 337 GIPNFIE-SITGQQSPINDFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGIS 395

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++
Sbjct: 396 YGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKM 455

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I    YL +  ++     RL  +I 
Sbjct: 456 YAILAIFYLVIITLLTRLAKRLEKRIR 482



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 275 LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFI 334

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + + +         
Sbjct: 335 FWGIPNFIESITGQQSP 351


>gi|304437141|ref|ZP_07397102.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369803|gb|EFM23467.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 223

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 13/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I V S  +G V+ L    ++R  H +  + L  +Y+  F   G P LV I L Y  
Sbjct: 25  VTIQITVLSTAIGFVIGLVVG-VARISHLRPLRMLAEVYVEFF--RGTPLLVQIFLFY-- 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PV      I G  + P F++   A    + A++AEI R+G+ +V  GQMEA  +LG
Sbjct: 80  -FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDEGQMEAGRSLG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G  II +T  + 
Sbjct: 132 MTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKTYGSF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI +    IYL +++ I+ F+  L  +  + +
Sbjct: 192 EIWMSVAVIYLVMTLTISRFVAYLERRCRVHD 223



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  +         +IG +VG  R+S  + +  +  VYVE FR  P LV IF  
Sbjct: 19  LLVGAGVTIQITVLSTAIGFVIGLVVGVARISHLRPLRMLAEVYVEFFRGTPLLVQIFLF 78

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 79  YFALP 83


>gi|312874740|ref|ZP_07734759.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311089485|gb|EFQ47910.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2053A-b]
          Length = 535

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 13/252 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ F  K    V      +  +          L+   +T+  +    +  F +G+++ + 
Sbjct: 268 LMSFAIKQQPQVATTKKTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGII 327

Query: 204 ATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            T    LS+  +        LL +   +  G P +V  A+ Y   +    L   N     
Sbjct: 328 RTIPTPLSKVKYWLLKLINWLLAVYVEIFRGTPMMVQAAVIY---YGIAQLWHINLDRT- 383

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 ++    +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+
Sbjct: 384 ------LAALFIISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAV 437

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  
Sbjct: 438 RNCLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFS 497

Query: 381 IALFMNRLNAKI 392
           I      +  K+
Sbjct: 498 ITRIFRLIENKL 509



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   IL G + T +L+  G I    IG LVG  R               L+ W+  VYV
Sbjct: 294 RYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYV 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +  +  
Sbjct: 354 EIFRGTPMMVQAAVIYYGIAQLWH 377


>gi|327462865|gb|EGF09187.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
 gi|328944941|gb|EGG39099.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 521

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|309807608|ref|ZP_07701556.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
 gi|309809764|ref|ZP_07703618.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169144|gb|EFO71214.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308169943|gb|EFO71982.1| ABC transporter, permease protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 535

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 13/252 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ F  K    V      +  +          L+   +T+  +    +  F +G+++ + 
Sbjct: 268 LMSFAIKQQPQVATTKKTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGII 327

Query: 204 ATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            T    LS+  +        LL +   +  G P +V  A+ Y   +    L   N     
Sbjct: 328 RTIPTPLSKVKYWLLKLINWLLAVYVEIFRGTPMMVQAAVIY---YGIAQLWHINLDRT- 383

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 ++    +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+
Sbjct: 384 ------LAALFIISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAV 437

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  
Sbjct: 438 RNCLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFS 497

Query: 381 IALFMNRLNAKI 392
           I      +  K+
Sbjct: 498 ITRIFRLIENKL 509



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   IL G + T +L+  G I    IG LVG  R               L+ W+  VYV
Sbjct: 294 RYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYV 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +  +  
Sbjct: 354 EIFRGTPMMVQAAVIYYGIAQLWH 377


>gi|324989902|gb|EGC21844.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 521

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|327468260|gb|EGF13745.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 521

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAELTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAELTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|239928984|ref|ZP_04685937.1| permease [Streptomyces ghanaensis ATCC 14672]
 gi|291437323|ref|ZP_06576713.1| arginine/ornithine transport permease [Streptomyces ghanaensis ATCC
           14672]
 gi|291340218|gb|EFE67174.1| arginine/ornithine transport permease [Streptomyces ghanaensis ATCC
           14672]
          Length = 312

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 5/257 (1%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V   +  ++L  +        + +G   +          +     + V +  +GIV  + 
Sbjct: 34  VSAVVALALLGGVVYAFSQGKINWGTIPDYFFDDRILSGVGKTLLLTVLAMAIGIVGGIL 93

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGST 261
              + R        ++   YI  F   G P LV + + + L   F+   LG F     S 
Sbjct: 94  L-AVMRLSKNPVTSSIAWFYIWFF--RGTPVLVQLIVWFNLGLVFEYINLGPFYKDEWSD 150

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F++  + L    AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR
Sbjct: 151 FMTPFLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHAKTLRRIVVPQAMR 210

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP  ++ +N+LK +SL   V + +L+     I   +G   E++ +    YL L+ + 
Sbjct: 211 VIVPPTGNEVINMLKTTSLVSVVQYPELLRAAQDIGQTSGAPAEMLFLAAAWYLLLTSVF 270

Query: 382 ALFMNRLNAKIALKEKK 398
           ++    L    A    +
Sbjct: 271 SVGQYYLERYYAKGSTR 287



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 36/106 (33%), Gaps = 5/106 (4%)

Query: 72  IDQGIVP-YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           I+ G +P Y  D      IL G   T  L    M    + G L+   RLS N + + I  
Sbjct: 55  INWGTIPDYFFDDR----ILSGVGKTLLLTVLAMAIGIVGGILLAVMRLSKNPVTSSIAW 110

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            Y+  FR  P LV +   +   L    I                 L
Sbjct: 111 FYIWFFRGTPVLVQLIVWFNLGLVFEYINLGPFYKDEWSDFMTPFL 156


>gi|293381104|ref|ZP_06627121.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|290922316|gb|EFD99301.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
          Length = 526

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 115/238 (48%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 276 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLN 335

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 336 VVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 383

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  
Sbjct: 384 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVN 443

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  ++
Sbjct: 444 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKRL 501



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G I    IG LVG  R               +V W+  VYV
Sbjct: 286 QYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLNVVKWLLSVYV 345

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 346 EIFRGTPMMVQAAVIYYGIAQFWH 369


>gi|259500817|ref|ZP_05743719.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners DSM 13335]
 gi|302190732|ref|ZP_07266986.1| ABC transporter permease component [Lactobacillus iners AB-1]
 gi|309805950|ref|ZP_07699978.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|312871166|ref|ZP_07731264.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|312873326|ref|ZP_07733381.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|325912202|ref|ZP_08174599.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325913645|ref|ZP_08176007.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|329919777|ref|ZP_08276728.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
 gi|259167511|gb|EEW52006.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners DSM 13335]
 gi|308167663|gb|EFO69814.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           03V1-b]
 gi|311091206|gb|EFQ49595.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2052A-d]
 gi|311093180|gb|EFQ51526.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           3008A-a]
 gi|325475861|gb|EGC79030.1| ABC transporter, permease protein [Lactobacillus iners UPII 143-D]
 gi|325477004|gb|EGC80154.1| ABC transporter, permease protein [Lactobacillus iners UPII 60-B]
 gi|328937124|gb|EGG33552.1| ABC transporter, permease protein [Lactobacillus iners SPIN 1401G]
          Length = 535

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 13/252 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ F  K    V      +  +          L+   +T+  +    +  F +G+++ + 
Sbjct: 268 LMSFAIKQQPQVSTTKKTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGII 327

Query: 204 ATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            T    LS+  +        LL +   +  G P +V  A+ Y   +    L   N     
Sbjct: 328 RTIPTPLSKVKYWLLKLINWLLAVYVEIFRGTPMMVQAAVIY---YGIAQLWHINLDRT- 383

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 ++    +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+
Sbjct: 384 ------LAALFIISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAV 437

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  
Sbjct: 438 RNCLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFS 497

Query: 381 IALFMNRLNAKI 392
           I      +  K+
Sbjct: 498 ITRIFRLIENKL 509



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   IL G + T +L+  G I    IG LVG  R               L+ W+  VYV
Sbjct: 294 RYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYV 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +  +  
Sbjct: 354 EIFRGTPMMVQAAVIYYGIAQLWH 377


>gi|325689080|gb|EGD31088.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 521

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFILTFSVTRILRYVEKRF 502



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|257067018|ref|YP_003153274.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
 gi|256798898|gb|ACV29553.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
          Length = 521

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 19/233 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-------HFHEKTGKALP 220
               +   L     T+       +  F+LG+++++      +       ++  K    + 
Sbjct: 286 WATYSTLFLKGVVNTLIIAIVSTILGFLLGLLVAVIRGMEVKKTDNAFTYYLHKIINWIL 345

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             Y+  F   G P +V   + +        L Q+  I  ST+     +  + +S  T A+
Sbjct: 346 GAYVEIF--RGTPMMVQSVIIFY------GLKQYFDIDLSTMF----AAILIVSINTGAY 393

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E+VR G+ ++ +GQ EA  A+G+TH +    V+LPQ + +I+P + ++++  +K++S+
Sbjct: 394 LSEVVRGGINSIDKGQFEACKAIGMTHFQTMVHVILPQTILTILPSIGNEFVINIKDTSV 453

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +   +L  +  ++   T Q     LI   IY  L+  I   +  L  +  
Sbjct: 454 LNVISVTELFFMSKSVAGSTYQYFPTYLITAVIYFVLTFTITRILLVLERRFR 506



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 12/85 (14%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR------------LSANKLVAWICRV 131
           +Y+T  L G VNT  +A    I   ++G LV   R               +K++ WI   
Sbjct: 288 TYSTLFLKGVVNTLIIAIVSTILGFLLGLLVAVIRGMEVKKTDNAFTYYLHKIINWILGA 347

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVL 156
           YVE+FR  P +V    ++  +    
Sbjct: 348 YVEIFRGTPMMVQSVIIFYGLKQYF 372


>gi|269792188|ref|YP_003317092.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099823|gb|ACZ18810.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 510

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 103/249 (41%), Gaps = 14/249 (5%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +           + L   +      L           K+ + + +L +        + R
Sbjct: 263 YAYNDWAEAHKPRLSLADRVRRYVSFLPTFGQAATVTLKVSICAMLLAMAFGFVL-AIMR 321

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F  +    L L YI    I G P L+ +   +                       FM+ 
Sbjct: 322 VFGPRWASTLALGYIEA--IRGTPVLIQLFFIFY-----------GLPNVGIKLSPFMAG 368

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I L    AA+ AE  R+GL+AVPRGQMEAA+AL +T  +A R V++PQA R +IPP+T+
Sbjct: 369 VIGLGMNYAAYEAENYRAGLLAVPRGQMEAALALSMTRWQALRHVVVPQAFRVVIPPVTN 428

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +++LLK+SSL   +   DL    G I           ++   IYL L +          
Sbjct: 429 DFISLLKDSSLVSIITMVDLTKAYGQIAATYYDYFGTGIMVAIIYLLLGLPFVRLSKWAE 488

Query: 390 AKIALKEKK 398
            K ++++++
Sbjct: 489 RKFSIQDRE 497



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 3/139 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+          T  ++   M+ A   G ++   R+   +  + +   Y+E  R  P L+
Sbjct: 287 SFLPTFGQAATVTLKVSICAMLLAMAFGFVLAIMRVFGPRWASTLALGYIEAIRGTPVLI 346

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            +FF++  + +V       +    G+ +N              A   V    +   L+L 
Sbjct: 347 QLFFIFYGLPNVGIKLSPFMAGVIGLGMNYAAYEAENYRAGLLA---VPRGQMEAALALS 403

Query: 204 ATRLSRHFHEKTGKALPLL 222
            TR     H    +A  ++
Sbjct: 404 MTRWQALRHVVVPQAFRVV 422


>gi|149909833|ref|ZP_01898484.1| hypothetical amino acid ABC transporter, permease protein
           [Moritella sp. PE36]
 gi|149807165|gb|EDM67121.1| hypothetical amino acid ABC transporter, permease protein
           [Moritella sp. PE36]
          Length = 315

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 19/264 (7%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VE     P L++       V     +    ++           L    +T+  +     F
Sbjct: 71  VEFDNGDPALIIEKADDVFVSDGDFVFSGDVISSVNQRSMGVLLQGLLMTIKLSLISLFF 130

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + ++G+V +L      R       +    LY+   +I G P LV I + Y          
Sbjct: 131 AVIIGLVAALM-----RISTNPFSRNFAFLYVE--VIRGTPLLVQIFIVY---------- 173

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F+G       F +   ALS +T A+IAEI+RSG+ ++  GQMEAA +LG+++ KA  
Sbjct: 174 --FFLGTIFDLDRFTAGIAALSVFTGAYIAEIIRSGIQSISPGQMEAARSLGMSYPKAMI 231

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA +  +PP+  Q++NL+K+SSL   +   DL   G  ++  +    E+      
Sbjct: 232 YVILPQAFKRTLPPMAGQFINLIKDSSLVSVISITDLTKAGREVVAGSFATFEVWFAVAA 291

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           +YL L+  ++  + R+  ++A  +
Sbjct: 292 LYLVLTSTLSFGVQRIEKRLATSD 315



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 30/63 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T  L+   +  A IIG +    R+S N        +YVEV R  P LV IF 
Sbjct: 112 VLLQGLLMTIKLSLISLFFAVIIGLVAALMRISTNPFSRNFAFLYVEVIRGTPLLVQIFI 171

Query: 148 LYK 150
           +Y 
Sbjct: 172 VYF 174


>gi|325284208|ref|YP_004256749.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus proteolyticus MRP]
 gi|324316017|gb|ADY27132.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus proteolyticus MRP]
          Length = 219

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 117/223 (52%), Gaps = 13/223 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F         ++   + V G +L      L+R    K    L   YI   LI G P L
Sbjct: 10  LPFLLQGAVLTLQVTAIALVAGTILGTLL-ALARLSPIKPLAWLATAYIE--LIRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I L Y   F  P       I G+ + P F +  +A S  +AA++AEI+RSG+  VPRG
Sbjct: 67  VQIFLIY---FGLPQ------ITGTNLEP-FPAGVLAFSLNSAAYVAEIMRSGIQGVPRG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+++LG + R   R ++LPQA R ++PPL ++ LNLLKN+SL  ++   +L   G  
Sbjct: 117 QTEASLSLGFSPRDTMRYIVLPQAFRRVLPPLVNEALNLLKNTSLLSSIALVELTRAGQI 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ++ +  E+ L    +YL+++++++   +RL  +    E++
Sbjct: 177 VAARSYKPFEMYLAIALVYLAMTMVLSFLSSRLEKRWGEGERR 219



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 38/82 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++  TI+GTL+   RLS  K +AW+   Y+E+ R  P LV IF +
Sbjct: 13  LLQGAVLTLQVTAIALVAGTILGTLLALARLSPIKPLAWLATAYIELIRGTPLLVQIFLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
           Y  +  +              F
Sbjct: 73  YFGLPQITGTNLEPFPAGVLAF 94


>gi|47094446|ref|ZP_00232127.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 4b H7858]
 gi|47017175|gb|EAL08027.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 4b H7858]
          Length = 395

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 15/247 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L       + ++   G F    G  F T T+ T A       + G +L      L +
Sbjct: 164 TGLLKKYQKEANKLMFQDGSFYEKYGNYFITGTLITIALA-AIGVLCGAILGSLL-ALMK 221

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +     YI    + G P L+ I + +           F           F+S 
Sbjct: 222 LAKTRWLRWPAACYIEF--VRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSG 268

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L +
Sbjct: 269 CIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGN 328

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  +    
Sbjct: 329 EFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAE 388

Query: 390 AKIALKE 396
            ++   +
Sbjct: 389 RRMRTSD 395



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   I+G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 188 YGNYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ 247

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 248 IFIVFFGT 255


>gi|324992354|gb|EGC24275.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324996123|gb|EGC28034.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|327460583|gb|EGF06918.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327488940|gb|EGF20737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 521

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAAIYFVLTFSVTRILRYVEKRF 502



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|218677586|ref|ZP_03525483.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 894]
          Length = 261

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 102/238 (42%), Positives = 142/238 (59%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           +S    LYD  +  I  QI+  +LL     W  +N   N+ ++N++ G GFL+ RAGFE+
Sbjct: 22  WSFQSALYDPTIRGIFFQILTIVLLVAFVWWVAHNTAVNLARANIASGFGFLNGRAGFEV 81

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q ++ Y+SDS+Y  A+LVGF+NT  +A +G+I ATIIG ++G GRLS N L+A +C VY
Sbjct: 82  GQSLIAYSSDSTYGRALLVGFLNTILIAVTGIISATIIGFIIGIGRLSRNWLIAKLCTVY 141

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           VEVFRNIPPL+VIFF Y  VL+VLP    S+ LP G +LNNRGLSFP         +   
Sbjct: 142 VEVFRNIPPLLVIFFWYSGVLAVLPNARESLHLPLGSYLNNRGLSFPKPIFGEGFWLVGI 201

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + V+ I+      R +      TGK    ++ S  L+ GLP +  +     L FD P+
Sbjct: 202 AVVIAIIAVFATARWAHRRQAATGKPFHTIWASIGLLIGLPLVAFLLAGAPLSFDYPI 259


>gi|317053038|ref|YP_004119392.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953365|gb|ADU72836.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 314

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 111/269 (41%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R     V++      ++S +  P            ++  ++    T            VL
Sbjct: 37  RWFAAGVLLVIAIGLIISAITNPRFHWDAVAQYLFDDSIIAGLYTTAWLTLASMAIGIVL 96

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKP 249
           G +++L      R         +   Y+  F   G P LV +   + L           P
Sbjct: 97  GTLIALM-----RMSKNPVLSTVASAYLWLF--RGTPLLVQLIFWFNLSALYPQITLGFP 149

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                     + V   + +  + L     A+++EIVRSGL AVP GQ EAA ALG++  +
Sbjct: 150 FGPSLGAFDANKVITVYAAALLGLGLNEGAYMSEIVRSGLSAVPNGQREAAEALGMSSFR 209

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+LPQAMR IIPP  +Q + +LK +SL   +   DL+     I     Q I ++++
Sbjct: 210 VMFRVILPQAMRIIIPPTGNQLIGMLKTTSLVSVIAMQDLLYSAQLIYTNNFQTIPLLIV 269

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL L+ ++++  + L    A  E++
Sbjct: 270 ASLWYLVLTTVLSVLQHYLEKYFARSEQR 298



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T WL  + M    ++GTL+   R+S N +++ +   Y+ +FR  P LV + F 
Sbjct: 75  IIAGLYTTAWLTLASMAIGIVLGTLIALMRMSKNPVLSTVASAYLWLFRGTPLLVQLIFW 134

Query: 149 YK 150
           + 
Sbjct: 135 FN 136


>gi|238927195|ref|ZP_04658955.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           inner membrane subunit [Selenomonas flueggei ATCC 43531]
 gi|238884977|gb|EEQ48615.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           inner membrane subunit [Selenomonas flueggei ATCC 43531]
          Length = 223

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 13/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I V S  +G V+ L    ++R  H +  + L  +Y+  F   G P LV I L Y  
Sbjct: 25  VTIQITVLSTAIGFVIGLIVG-VARISHLRPLRMLAEVYVEFF--RGTPLLVQIFLFY-- 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PV      I G  + P F++   A    + A++AEI R+G+ +V  GQMEA  +LG
Sbjct: 80  -FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDEGQMEAGRSLG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G  II +T  + 
Sbjct: 132 MTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKTYGSF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI +    IYL +++ I+ F+  L  +  + +
Sbjct: 192 EIWMSVAVIYLVMTLTISRFVAYLERRCRVHD 223



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  +         +IG +VG  R+S  + +  +  VYVE FR  P LV IF  
Sbjct: 19  LLVGAGVTIQITVLSTAIGFVIGLIVGVARISHLRPLRMLAEVYVEFFRGTPLLVQIFLF 78

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 79  YFALP 83


>gi|327472311|gb|EGF17742.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 521

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|290968909|ref|ZP_06560446.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781205|gb|EFD93796.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
          Length = 222

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/231 (31%), Positives = 115/231 (49%), Gaps = 13/231 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F   L    L           +I   S  LG +L L    + R    K  KA+ + Y++ 
Sbjct: 4   FDFGLIWDSLPLLIAGAGVTIEITAISVGLGFILGLVV-SVCRLSGWKILKAVAVCYVN- 61

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G P LV I L Y   F  P+L              F++   A S  + A+++EI R
Sbjct: 62  -ILRGTPLLVQIFLIY---FALPMLIG-------QRINPFLAAVAACSINSGAYVSEIFR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AV RGQMEA  +LGL+  +    ++LPQA R +IPPL ++++++ K +SL   +GF
Sbjct: 111 AGIQAVDRGQMEAGRSLGLSWMQTMWYIILPQAFRKVIPPLGNEFISMTKETSLVSVIGF 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L   G  II +T  + EI L    IYL +++ IA  ++ L  + A  ++
Sbjct: 171 EELTRRGQLIIAKTYGSFEIWLTVAAIYLVMTLSIAQLVSYLERRFATDDR 221



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 34/75 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +    +    I+G +V   RLS  K++  +   YV + R  P LV IF +
Sbjct: 16  LIAGAGVTIEITAISVGLGFILGLVVSVCRLSGWKILKAVAVCYVNILRGTPLLVQIFLI 75

Query: 149 YKSVLSVLPIPDHSI 163
           Y ++  ++    +  
Sbjct: 76  YFALPMLIGQRINPF 90


>gi|227894269|ref|ZP_04012074.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227863912|gb|EEJ71333.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 526

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 115/238 (48%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 276 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALN 335

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 336 FVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----LAALIIVS 383

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  
Sbjct: 384 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVN 443

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  K+
Sbjct: 444 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKKL 501



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G I    IG LVG  R                V W+  VYV
Sbjct: 286 QYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALNFVKWLLSVYV 345

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 346 EIFRGTPMMVQAAVIYYGIAQFWH 369


>gi|292669477|ref|ZP_06602903.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas noxia ATCC 43541]
 gi|292648930|gb|EFF66902.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas noxia ATCC 43541]
          Length = 223

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F M L         +      +I V S  +G V+ L    ++R  H +  + L  +Y+
Sbjct: 5   MTFDMDLVFNSFPLLLVGAGVTIQITVLSTAIGFVIGLIVG-VARISHVRLLRMLAEVYV 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV I L Y   F  PVL              F++   A    + A++AEI
Sbjct: 64  EFF--RGTPLLVQIFLFY---FALPVLTG-------QRIDPFIAAISACGINSGAYVAEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ +V  GQMEA  +LG+T  +  R +++PQA + +IPPL ++++ +LK+SSL   +
Sbjct: 112 FRAGIQSVDDGQMEAGRSLGMTWLQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVI 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           GF +L   G  II +T  + EI +    IYL +++ I+ F+  L  +  + +
Sbjct: 172 GFEELTRRGQLIIAKTYGSFEIWMSVAVIYLVMTLTISRFVAYLERRYRVND 223



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 33/65 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  +         +IG +VG  R+S  +L+  +  VYVE FR  P LV IF  
Sbjct: 19  LLVGAGVTIQITVLSTAIGFVIGLIVGVARISHVRLLRMLAEVYVEFFRGTPLLVQIFLF 78

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 79  YFALP 83


>gi|257088688|ref|ZP_05583049.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|256997500|gb|EEU84020.1| ABC amino acid transporter [Enterococcus faecalis CH188]
          Length = 507

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 271 WNQYGDMFLRGTGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 330

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I +S  T A+++
Sbjct: 331 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFI-VSVNTGAYMS 378

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 379 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 438

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 439 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 488



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 273 QYGDMFLRGTGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 332

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 333 EVFRGTPMMVQAMVIFYGLALAF 355


>gi|325697553|gb|EGD39439.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 521

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEV 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+EV
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEV 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|312872684|ref|ZP_07732749.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311091726|gb|EFQ50105.1| ABC transporter, permease protein [Lactobacillus iners LEAF
           2062A-h1]
          Length = 535

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 117/252 (46%), Gaps = 13/252 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ F  K    V      +  +          L+   +T+  +    +  F +G+++ + 
Sbjct: 268 LMSFAIKQQPQVSTTKKTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGII 327

Query: 204 ATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            T    LS+  +        LL +   +  G P +V  A+ Y   +    L   N     
Sbjct: 328 RTIPTPLSKVKYWLLKLINWLLAVYVEIFRGTPMMVQAAVIY---YGIAQLWHINLDRT- 383

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 ++    +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+
Sbjct: 384 ------LAALFIISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAV 437

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  
Sbjct: 438 RNCLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFS 497

Query: 381 IALFMNRLNAKI 392
           I      +  K+
Sbjct: 498 ITRIFRLIENKL 509



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   IL G + T +L+  G I    IG LVG  R               L+ W+  VYV
Sbjct: 294 RYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPLSKVKYWLLKLINWLLAVYV 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +  +  
Sbjct: 354 EIFRGTPMMVQAAVIYYGIAQLWH 377


>gi|199597698|ref|ZP_03211126.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|258509843|ref|YP_003172594.1| ABC transporter amino acid-binding protein [Lactobacillus rhamnosus
           GG]
 gi|199591505|gb|EDY99583.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|257149770|emb|CAR88743.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus GG]
          Length = 532

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 13/234 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL- 219
           +  +          L    +T+  +    +  F++G+++ +  T    +   ++  +A+ 
Sbjct: 283 NWFMAIMKQYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 342

Query: 220 -PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             LL +   +  G P +V  A+ Y        L                +  + +S  T 
Sbjct: 343 NWLLSVYIEVFRGTPMIVQAAVLYYGAAQAWHLN----------MDRTTAALLIVSINTG 392

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++  +K++
Sbjct: 393 AYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDT 452

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+     +   +
Sbjct: 453 SVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTISRLFRLIEKHL 506



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   +L G   T  ++  G +   IIG LVG  R +             ++ W+  VY+
Sbjct: 291 QYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVINWLLSVYI 350

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    LY        
Sbjct: 351 EVFRGTPMIVQAAVLYYGAAQAWH 374


>gi|325695641|gb|EGD37541.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 521

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHSQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|296135302|ref|YP_003642544.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
 gi|295795424|gb|ADG30214.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
          Length = 310

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 8/263 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +    V   L  +  S+   P     +    F + R L    LT++      V    L
Sbjct: 30  RWVAAAAVFVLLLATAYSLTTNPRFEWSVVGEYFFSVRILHGLLLTLELTVISMVIGVAL 89

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFN 255
           G++L++      R  H          YI  F   G P LV I   + +    P +     
Sbjct: 90  GVLLAVM-----RLSHNPMVSKASWFYIWLF--RGTPVLVQILFWFNITALYPNIGFGSW 142

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               + +   F++  +AL     A++AEIVR+G+++V  GQ EA  ALG++  +  R V+
Sbjct: 143 SFDANNLITPFVAAILALGLNEGAYMAEIVRAGILSVDEGQSEAGAALGMSRLQIMRRVV 202

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR I+PP  ++ +++LK +SL   +  +DL+     I +   + I ++L+    YL
Sbjct: 203 LPQAMRVIVPPTGNEAISMLKTTSLVSVIAVSDLLYSAQLIYSVNYRTIPLLLVASIWYL 262

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++++    +         +
Sbjct: 263 IVTTLLSIGQFYIERHFGRSATR 285



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
               M+    +G L+   RLS N +V+     Y+ +FR  P LV I F +        I 
Sbjct: 79  TVISMVIGVALGVLLAVMRLSHNPMVSKASWFYIWLFRGTPVLVQILFWFNITALYPNIG 138

Query: 160 DHSIVLP 166
             S    
Sbjct: 139 FGSWSFD 145


>gi|323350416|ref|ZP_08086079.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123353|gb|EFX95031.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 521

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|328884996|emb|CCA58235.1| ABC-type amino acid transport system, permease component
           [Streptomyces venezuelae ATCC 10712]
          Length = 316

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 5/256 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV+  L   ++      +      +    +   L     T+  +        VLGIV ++
Sbjct: 41  VVVVALLGWLVYAFSQGNIIWDTVWDKLFDPSILDGLANTVIISVSSMALGLVLGIVFAV 100

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R        A+  LYI  F    +   +L+     L F+   LG         V
Sbjct: 101 M-----RLSKNPVTGAVAWLYIWFFRGTPVYVQLLVWFNLSLIFEYINLGPIYKNETVDV 155

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              FM   + L     A++AEIVR+G+ +V  GQ EAA ALG++  K    V+LPQAMR 
Sbjct: 156 MTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEAAHALGMSQTKTMGRVVLPQAMRV 215

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PP  ++++N+LK SSL  AV + +L+     I +  G  +E++ +    YL+L+ + +
Sbjct: 216 IVPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGSTAGAVMEMLFVASIWYLALTSVFS 275

Query: 383 LFMNRLNAKIALKEKK 398
           +    L  + A    +
Sbjct: 276 VGQYYLERRFARGSTR 291



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 2/86 (2%)

Query: 70  FEIDQGIVPYTSDSS--YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +     +  +IL G  NT  ++ S M    ++G +    RLS N +   
Sbjct: 52  YAFSQGNIIWDTVWDKLFDPSILDGLANTVIISVSSMALGLVLGIVFAVMRLSKNPVTGA 111

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVL 153
           +  +Y+  FR  P  V +   +   L
Sbjct: 112 VAWLYIWFFRGTPVYVQLLVWFNLSL 137


>gi|227328458|ref|ZP_03832482.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 314

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 14/266 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  L+V+  L     SVL  P     +    F  +  L    +T+   A   V  F  
Sbjct: 20  RWISALLVLLLLGAIAHSVLNNPRFEWRVVVDSFTEDSILQGVIMTLKLTAISVVLGFGG 79

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKP 249
           G +L+L      R        A+   Y   F   G+PTLV + L Y +           P
Sbjct: 80  GTILALM-----RLSSNPVLVAVSWGYTWFF--RGVPTLVQLFLWYNIAALYPTISLSLP 132

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G+   + G+T+   F +  +AL  + +A+ AEIVR+G+ +V  GQ+EAA ALG    +
Sbjct: 133 FVGELFSVPGNTLISPFNAAVLALVMHQSAYAAEIVRAGIQSVNPGQLEAARALGYRKPQ 192

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
                +LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T + I ++L+
Sbjct: 193 IFFYTVLPQAMRAILPPAGNEVIGQLKTTAVVSVISLQDVLYSAQIIYQRTYEVIPLLLV 252

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               YL L+ ++++    +       
Sbjct: 253 ATIWYLLLTSVLSVGQYYVERYFGRS 278



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L    ++     GT++   RLS+N ++  +   Y   FR +P LV +F  
Sbjct: 58  ILQGVIMTLKLTAISVVLGFGGGTILALMRLSSNPVLVAVSWGYTWFFRGVPTLVQLFLW 117

Query: 149 YKS 151
           Y  
Sbjct: 118 YNI 120


>gi|330718659|ref|ZP_08313259.1| amino acid ABC transporter [Leuconostoc fallax KCTC 3537]
          Length = 414

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 18/231 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F     N  +     T+   A   +    LG VL+L   +LSR F     KA+  +Y+  
Sbjct: 202 FWAKYGNLFIKGTLYTLALAAIAVIVGVGLGTVLALM--KLSRAF---ILKAIANIYVE- 255

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV   + +           F           F +  +A+   +AA++ EI+R
Sbjct: 256 -YVRGTPLLVQAFMVF-----------FGTQVIGLNLSAFAAGALAMGLNSAAYVTEIIR 303

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQMEAA +LGL++ K  R V+LPQA+++I+P L ++++ ++K  S+   +G 
Sbjct: 304 SGINSVSAGQMEAARSLGLSNGKTMRYVILPQAVKNILPALGNEFVTVIKEGSVVSVIGV 363

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L+   G I   + +    +LI   IY  L+  I+  +     ++A   +
Sbjct: 364 GELMFQTGVIQGASFKPFFPLLITSVIYFVLTFSISRALGFAEKRMARSSR 414



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA   +I    +GT++   +LS   ++  I  +YVE  R  P LV 
Sbjct: 206 YGNLFIKGTLYTLALAAIAVIVGVGLGTVLALMKLSRAFILKAIANIYVEYVRGTPLLVQ 265

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 266 AFMVFFGT 273


>gi|320103283|ref|YP_004178874.1| polar amino acid ABC transporter inner membrane subunit [Isosphaera
           pallida ATCC 43644]
 gi|319750565|gb|ADV62325.1| polar amino acid ABC transporter, inner membrane subunit
           [Isosphaera pallida ATCC 43644]
          Length = 577

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 18/248 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
               +++       P   +     +      ++   +T+         + + G+V++L  
Sbjct: 317 TLATFEATSVEQVRPKRGLDFGRLIVYGPTLIAAAGMTIFLACAAMPLAILAGMVIAL-- 374

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R +  K    L   Y+   +I G P ++ +   + L    P L            P
Sbjct: 375 ---GRVYGPKPLDWLLRGYVE--VIRGTPLMLQLFFLFYL---MPEL--------GVYLP 418

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              +  + L+   +A+ AEI R+GL A+PRGQ+EAA ALG+T  +A R V+LPQ +R ++
Sbjct: 419 AIAAGVLGLAINYSAYEAEIYRAGLQAIPRGQLEAARALGMTLFQAIRRVVLPQTVRIVV 478

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP+T+ ++ + K++S+   +   +L      + N  G  +E  L    IYL++S+ +A F
Sbjct: 479 PPVTNDFIAMFKDTSVCSVITLVELTKQYSILSNTQGGVVEFGLAAGAIYLAMSLPLAWF 538

Query: 385 MNRLNAKI 392
                 ++
Sbjct: 539 STWFERRL 546



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 42/104 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++     T +LA + M  A + G ++  GR+   K + W+ R YVEV R  P ++ 
Sbjct: 343 YGPTLIAAAGMTIFLACAAMPLAILAGMVIALGRVYGPKPLDWLLRGYVEVIRGTPLMLQ 402

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +FFL+  +  +            G+ +N              A 
Sbjct: 403 LFFLFYLMPELGVYLPAIAAGVLGLAINYSAYEAEIYRAGLQAI 446


>gi|323498512|ref|ZP_08103505.1| polar amino acid ABC transporter inner membrane subunit [Vibrio
           sinaloensis DSM 21326]
 gi|323316401|gb|EGA69419.1| polar amino acid ABC transporter inner membrane subunit [Vibrio
           sinaloensis DSM 21326]
          Length = 315

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 72/227 (31%), Positives = 114/227 (50%), Gaps = 19/227 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +     L     T+  +    V +  LG+V+ L      R       K L ++YI   +I
Sbjct: 108 WRIGPILEGVITTVKISLWSLVIALALGLVIGLM-----RISSNPALKKLSIVYIE--II 160

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV I + Y             FIG       F +  IALS +TAA++AEIVRSG+
Sbjct: 161 RGTPLLVQIFIVY------------FFIGTVLDLERFTAGVIALSVFTAAYVAEIVRSGI 208

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+GQMEAA +LG+ + KA   V+LPQA +  +PPL  Q++NL+K+SSL   +   DL
Sbjct: 209 QSIPKGQMEAARSLGMNYPKAMIYVILPQAFKQTLPPLAGQFINLIKDSSLVSVISITDL 268

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G  +++ +    E+      +YL L+  ++  +  L  ++A  +
Sbjct: 269 TKAGREVVSGSFAPFEVWFTVAALYLILTSGLSWAIQTLEKRLAASD 315



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  ++   ++ A  +G ++G  R+S+N  +  +  VY+E+ R  P LV IF +
Sbjct: 113 ILEGVITTVKISLWSLVIALALGLVIGLMRISSNPALKKLSIVYIEIIRGTPLLVQIFIV 172

Query: 149 YKSV 152
           Y  +
Sbjct: 173 YFFI 176


>gi|300716303|ref|YP_003741106.1| ABC polar amino acid family transporter, inner membrane subunit
           [Erwinia billingiae Eb661]
 gi|299062139|emb|CAX59255.1| ABC polar amino acid family transporter, inner membrane subunit
           [Erwinia billingiae Eb661]
          Length = 305

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +V++  +     S++  P+           +   LS    T      I + + VL
Sbjct: 44  RWISAVVIVVLIALVAESMITNPNFGWATVGKYLFSPTILSGLVTTSWLTLVIMLLAIVL 103

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G+V+++      R             +I  F   G P LV +   Y L    P +     
Sbjct: 104 GVVIAVM-----RLSTNPLLSGFSGGWIWFF--RGTPVLVQLIFWYNLAALYPTVNIGIP 156

Query: 254 --FNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             F+   GS   +   + +  + L    +A++AEI+R+G+ +V  GQ EAA ALG+T  +
Sbjct: 157 GVFSLWQGSMNDLITPWTAAILGLGLNESAYMAEIIRAGISSVDDGQQEAARALGMTKNQ 216

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + V+LPQA+  IIPP  +Q + +LK +SL   +  +DL+     I ++T + I ++++
Sbjct: 217 YLKRVILPQAVPFIIPPTGNQIIGMLKTTSLVSVISLSDLLYSAQAIYSRTYENIPLLIV 276

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL  + +++    R+    +    +
Sbjct: 277 ACIWYLVATTLLSAAQTRIEKHYSKGRVR 305



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G V T WL    M+ A ++G ++   RLS N L++     ++  FR  P LV + F 
Sbjct: 82  ILSGLVTTSWLTLVIMLLAIVLGVVIAVMRLSTNPLLSGFSGGWIWFFRGTPVLVQLIFW 141

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           Y    ++ P  +  I   F ++  +        
Sbjct: 142 YNLA-ALYPTVNIGIPGVFSLWQGSMNDLITPW 173


>gi|169627382|ref|YP_001701031.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC
           19977]
 gi|169239349|emb|CAM60377.1| Probable amino acid ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 481

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     +   SFV+G+V++L    L+R    +    L  +YIS      L   
Sbjct: 273 WPMARAMITVTLPLTAISFVIGLVIALGV-ALARMSGHRVVTGLARIYISVIRGTPLLLQ 331

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +       F   +               F +  IA S     + AEI+RS ++++PRG
Sbjct: 332 LFLIFFALPEFGVKI-------------SPFPAAVIAFSLNVGGYAAEIIRSSILSIPRG 378

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LG+++      +++PQA R  +PPL++  ++L+K++SLA A+   D++     
Sbjct: 379 QWEAASSLGMSYSTTLWRIVIPQASRVAVPPLSNTLISLVKDTSLASAILVTDVMRTAQV 438

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               T Q   + +     Y  + + ++   +RL  ++     +
Sbjct: 439 AAAPTFQFFTLYVTAGVYYWIVCMAMSAVQDRLEQRLEKSVAR 481



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              T  L     +   +I   V   R+S +++V  + R+Y+ V R  P
Sbjct: 280 ITVTLPLTAISFVIGLVIALGVALARMSGHRVVTGLARIYISVIRGTP 327


>gi|29374889|ref|NP_814042.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|29342347|gb|AAO80113.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
          Length = 527

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 291 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 350

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I +S  T A+++
Sbjct: 351 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFI-VSVNTGAYMS 398

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 399 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 458

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 459 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 508



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 293 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 352

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 353 EVFRGTPMMVQAMVIFYGLALAF 375


>gi|256855202|ref|ZP_05560563.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|300862178|ref|ZP_07108258.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|256709715|gb|EEU24762.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|295112535|emb|CBL31172.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300848703|gb|EFK76460.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
          Length = 527

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 291 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 350

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I +S  T A+++
Sbjct: 351 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFI-VSVNTGAYMS 398

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 399 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 458

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 459 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 508



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 293 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 352

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 353 EVFRGTPMMVQAMVIFYGLALAF 375


>gi|327399611|ref|YP_004340480.1| polar amino acid ABC transporter inner membrane subunit [Hippea
           maritima DSM 10411]
 gi|327182240|gb|AEA34421.1| polar amino acid ABC transporter, inner membrane subunit [Hippea
           maritima DSM 10411]
          Length = 314

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 19/231 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               +     L    +T+  +    + + V+G ++ L      R       K L ++YI 
Sbjct: 103 YNSSYKAGPLLMGLYMTIKVSLLSIIMALVIGFIVGLM-----RISDNPLFKNLAIVYIE 157

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             LI G P LV I + Y             FIG       F +   AL+ +  A+IAEI+
Sbjct: 158 --LIRGTPLLVQIFIIY------------FFIGTIFSMTRFFAGAFALAVFEGAYIAEII 203

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++PRGQ EAA+ALG+ + +  R +++PQA++ ++P L  Q+++L+K+SSL   + 
Sbjct: 204 RAGIQSIPRGQTEAAVALGMNYYQVMRYIIMPQAIKRVLPALAGQFISLIKDSSLLSVIS 263

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L   G  I++ T    E+      +Y  ++  ++L    L  ++A  E
Sbjct: 264 LTELTKAGKEIVSSTFSPFEVWFSVAALYFIVTYTLSLLDRYLERRLAGNE 314



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 39/74 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   T  ++   +I A +IG +VG  R+S N L   +  VY+E+ R  P LV IF +
Sbjct: 112 LLMGLYMTIKVSLLSIIMALVIGFIVGLMRISDNPLFKNLAIVYIELIRGTPLLVQIFII 171

Query: 149 YKSVLSVLPIPDHS 162
           Y  + ++  +    
Sbjct: 172 YFFIGTIFSMTRFF 185


>gi|257418660|ref|ZP_05595654.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|257160488|gb|EEU90448.1| ABC amino acid transporter [Enterococcus faecalis T11]
          Length = 507

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 271 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 330

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I +S  T A+++
Sbjct: 331 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFI-VSVNTGAYMS 378

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 379 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 438

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 439 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 488



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 273 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 332

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 333 EVFRGTPMMVQAMVIFYGLALAF 355


>gi|125718753|ref|YP_001035886.1| amino acid ABC transporter permease/amino acid-binding protein
           [Streptococcus sanguinis SK36]
 gi|125498670|gb|ABN45336.1| Amino acid ABC transporter, amino acid-binding protein/permease
           protein, putative [Streptococcus sanguinis SK36]
          Length = 521

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y           F      T+     +    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA-----FGISIDRTI-----AAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|294339404|emb|CAZ87760.1| putative ABC-type amino acid transport system, permease component
           [Thiomonas sp. 3As]
          Length = 310

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 8/263 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +    V   L  +  S+   P     +    F + R L    LT++      V    L
Sbjct: 30  RWVAAAAVFVLLLATAYSLTTNPRFEWSVVGEYFFSVRILHGLLLTLELTVISMVIGVAL 89

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFN 255
           G++L++      R  H          YI  F   G P LV I   + +    P +     
Sbjct: 90  GVLLAVM-----RLSHNPMVSKASWFYIWLF--RGTPVLVQILFWFNITALYPNIGFGSW 142

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               + +   F++  +AL     A++AEIVR+G+++V  GQ EA  ALG++  +  R V+
Sbjct: 143 SFDANNLITPFVAAILALGLNEGAYMAEIVRAGILSVDEGQSEAGAALGMSRLQIMRRVV 202

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR I+PP  ++ +++LK +SL   +  +DL+     I +   + I ++L+    YL
Sbjct: 203 LPQAMRVIVPPTGNEAISMLKTTSLVSVIAVSDLLYSAQLIYSVNYRTIPLLLVASIWYL 262

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++++    +         +
Sbjct: 263 IVTTLLSIGQFYIERHFGRSATR 285



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
               M+    +G L+   RLS N +V+     Y+ +FR  P LV I F +        I 
Sbjct: 79  TVISMVIGVALGVLLAVMRLSHNPMVSKASWFYIWLFRGTPVLVQILFWFNITALYPNIG 138

Query: 160 DHSIVLP 166
             S    
Sbjct: 139 FGSWSFD 145


>gi|255974748|ref|ZP_05425334.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256964171|ref|ZP_05568342.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis HIP11704]
 gi|255967620|gb|EET98242.1| aminoacid ABC transporter [Enterococcus faecalis T2]
 gi|256954667|gb|EEU71299.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis HIP11704]
          Length = 507

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 271 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 330

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I +S  T A+++
Sbjct: 331 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFI-VSVNTGAYMS 378

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 379 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 438

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 439 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 488



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 273 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 332

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 333 EVFRGTPMMVQAMVIFYGLALAF 355


>gi|154249738|ref|YP_001410563.1| polar amino acid ABC transporter, inner membrane subunit
           [Fervidobacterium nodosum Rt17-B1]
 gi|154153674|gb|ABS60906.1| polar amino acid ABC transporter, inner membrane subunit
           [Fervidobacterium nodosum Rt17-B1]
          Length = 216

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 14/210 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+  FS  +G++L  F   + R    K        Y+    + G P LV I++ Y 
Sbjct: 19  WETLKLTAFSVGIGLILGTFIG-MGRLSKIKLINYPCTAYVEF--LRGTPLLVQISIVY- 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F  P L              + +   AL   + A+IAEIVR+G+ ++P+GQ EAA +L
Sbjct: 75  --FGLPQL--------GIQLAPYPAAITALGLNSGAYIAEIVRAGIQSIPKGQYEAARSL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLTH +A R V+LPQA R+I+P L ++++ L K+SSLA  +G ++L+  G  +I++T Q 
Sbjct: 125 GLTHWQAMRYVILPQAFRNILPALGNEFITLTKDSSLASVIGVSELMRSGQFVISRTFQT 184

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I     FIY  ++ +I+  +  +  ++A
Sbjct: 185 FSIYFGIAFIYFIMTFVISRLVRYIERRMA 214



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 34/71 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L+G   T  L    +    I+GT +G GRLS  KL+ + C  YVE  R  P LV I  
Sbjct: 13  YLLLGAWETLKLTAFSVGIGLILGTFIGMGRLSKIKLINYPCTAYVEFLRGTPLLVQISI 72

Query: 148 LYKSVLSVLPI 158
           +Y  +  +   
Sbjct: 73  VYFGLPQLGIQ 83


>gi|257125489|ref|YP_003163603.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049428|gb|ACV38612.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 521

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 113/239 (47%), Gaps = 21/239 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS---------RHFHE 213
            V  F        +    +T+  +    V  F++G+V++LF    S         + +  
Sbjct: 278 WVTYFIQKNWKEFVKGTLVTLFISITGTVVGFLIGLVVALFRHSESETDEQTQKYKKYGL 337

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K    L  +YI+ F   G P +V   + Y            + +    +SP   +L+I +
Sbjct: 338 KFINTLSSVYIAVF--RGTPMIVQSMVIYY---------GLSQVFNINLSPMVAALFI-V 385

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  T A+++EI+R G+ ++  GQ EAA A+G+T+ +  + ++ PQ  R+I+P + ++ + 
Sbjct: 386 SINTGAYMSEIIRGGIDSIDNGQFEAAKAIGMTNFQLMQSIIFPQMFRNILPMIGNELIV 445

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K++S+   +   +L  +  ++     +  E+ +I   IY  L+  ++L + ++  +I
Sbjct: 446 NIKDTSVLNVISVTELFFISKSVAGTYSRYYEVFIITSVIYFFLTFTLSLILKQIEKRI 504



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 14/98 (14%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN--------------KLVAWICRV 131
               + G + T +++ +G +   +IG +V   R S +              K +  +  V
Sbjct: 287 WKEFVKGTLVTLFISITGTVVGFLIGLVVALFRHSESETDEQTQKYKKYGLKFINTLSSV 346

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           Y+ VFR  P +V    +Y  +  V  I    +V    +
Sbjct: 347 YIAVFRGTPMIVQSMVIYYGLSQVFNINLSPMVAALFI 384


>gi|315654090|ref|ZP_07907006.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|315488786|gb|EFU78432.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
          Length = 535

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 117/252 (46%), Gaps = 13/252 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ F  K    V      +  +          L+   +T+  +    +  F +G+++ + 
Sbjct: 268 LMSFAIKQQPQVSTTKKTNWFVSIMHRYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGII 327

Query: 204 ATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            T    +S+  +        LL +   +  G P +V  A+ Y   +    L   N     
Sbjct: 328 RTIPTPISKVKYWLLKLINWLLAVYVEIFRGTPMMVQAAVIY---YGIAQLWHINLDRT- 383

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 ++    +S  T A++AE++R G+I+ P+GQ EAA ALG++H +    ++LPQA+
Sbjct: 384 ------LAALFIISINTGAYLAEVIRGGIISTPKGQFEAASALGMSHSQKMWHIILPQAV 437

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P +T++++  +K++S+   +  ++L  VG T+ +QT Q  +   I   +YL L+  
Sbjct: 438 RNCLPSITNEFIVNIKDTSVLSIISVSELFFVGTTVASQTFQFFQTYFIISIVYLILTFS 497

Query: 381 IALFMNRLNAKI 392
           I      +  K+
Sbjct: 498 ITRIFRLIENKL 509



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   IL G + T +L+  G I    IG LVG  R               L+ W+  VYV
Sbjct: 294 RYGKMILNGVIMTVFLSLIGTIIGFFIGLLVGIIRTIPTPISKVKYWLLKLINWLLAVYV 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +  +  
Sbjct: 354 EIFRGTPMMVQAAVIYYGIAQLWH 377


>gi|257081536|ref|ZP_05575897.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|256989566|gb|EEU76868.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
          Length = 507

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 271 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 330

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I +S  T A+++
Sbjct: 331 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFI-VSVNTGAYMS 378

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 379 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 438

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 439 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 488



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 273 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 332

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 333 EVFRGTPMMVQAMVIFYGLALAF 355


>gi|258541026|ref|YP_003175525.1| amino acid ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152702|emb|CAR91674.1| ABC transporter, amino acid-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|259651105|dbj|BAI43267.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 535

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 109/234 (46%), Gaps = 13/234 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL- 219
           +  +          L    +T+  +    +  F++G+++ +  T    +   ++  +A+ 
Sbjct: 286 NWFMAIMKQYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVI 345

Query: 220 -PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             LL +   +  G P +V  A+ Y        L                +  + +S  T 
Sbjct: 346 NWLLSVYIEVFRGTPMIVQAAVLYYGAAQAWHLN----------MDRTTAALLIVSINTG 395

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+I+EI+R G+I+V  GQ EAA ALG+TH +    V+LPQA+R+ +P +T++++  +K++
Sbjct: 396 AYISEIIRGGIISVDEGQFEAANALGMTHLQTMMKVILPQAVRNSLPAVTNEFIVNIKDT 455

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S+   +  ++L   G TI  Q+ Q     LI   IYL ++  I+     +   +
Sbjct: 456 SVLSVISVSELFFSGETIAGQSFQFFHTYLIVSGIYLIMTFTISRLFRLIEKHL 509



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   +L G   T  ++  G +   IIG LVG  R +             ++ W+  VY+
Sbjct: 294 QYGPMLLRGTGMTLLISLVGTLVGFIIGLLVGIIRTTPKPKKLGQRGLRAVINWLLSVYI 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    LY        
Sbjct: 354 EVFRGTPMIVQAAVLYYGAAQAWH 377


>gi|257421538|ref|ZP_05598528.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|294779326|ref|ZP_06744729.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|257163362|gb|EEU93322.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|294453612|gb|EFG22011.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|323479461|gb|ADX78900.1| amino acid permease ABC transporter protein [Enterococcus faecalis
           62]
          Length = 527

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 291 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 350

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I +S  T A+++
Sbjct: 351 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFI-VSVNTGAYMS 398

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 399 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 458

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 459 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 508



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 293 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 352

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 353 EVFRGTPMMVQAMVIFYGLALAF 375


>gi|255971748|ref|ZP_05422334.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|256618341|ref|ZP_05475187.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis ATCC 4200]
 gi|256762043|ref|ZP_05502623.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256956823|ref|ZP_05560994.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis DS5]
 gi|256960629|ref|ZP_05564800.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|257078493|ref|ZP_05572854.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|257084184|ref|ZP_05578545.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis Fly1]
 gi|257088011|ref|ZP_05582372.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|257417614|ref|ZP_05594608.1| ABC-type amino acid transport system [Enterococcus faecalis
           AR01/DG]
 gi|255962766|gb|EET95242.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|256597868|gb|EEU17044.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis ATCC 4200]
 gi|256683294|gb|EEU22989.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256947319|gb|EEU63951.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis DS5]
 gi|256951125|gb|EEU67757.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|256986523|gb|EEU73825.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|256992214|gb|EEU79516.1| amino acid ABC transporter substrate binding protein/permease
           [Enterococcus faecalis Fly1]
 gi|256996041|gb|EEU83343.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|257159442|gb|EEU89402.1| ABC-type amino acid transport system [Enterococcus faecalis
           ARO1/DG]
          Length = 507

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 17/230 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLL 222
                +  L    LT+       V    LG+++ +F T          F +K G  +  +
Sbjct: 271 WNQYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSI 330

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P +V   + +                G ++     +L+I +S  T A+++
Sbjct: 331 YIEVF--RGTPMMVQAMVIFY---------GLALAFGISLDRTVAALFI-VSVNTGAYMS 378

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV +GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++  
Sbjct: 379 EIVRGGIFAVDKGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVLS 438

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G ADL   G        Q  +   I   +YL ++ +I   +  +  K+
Sbjct: 439 VIGVADLFFQGNAASGANFQFFQTFTIVGIMYLVMTFVITRILRVVERKM 488



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              KL   I  +Y+
Sbjct: 273 QYGDMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRTIPDSENPVARFFQKLGNLILSIYI 332

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 333 EVFRGTPMMVQAMVIFYGLALAF 355


>gi|325848662|ref|ZP_08170240.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480664|gb|EGC83724.1| ABC transporter, permease protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 529

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-------RLSRHFHEKTGKALP 220
               ++  ++    T+  +    +  F +G+V+++           +  +  +K    + 
Sbjct: 294 WSEYSSLFINGIFSTLFISIISTIIGFFIGLVVAVIRKTNVDKNKNIIGYVLQKIINFIL 353

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  F   G P +V   L +          QF  I  ST+    ++ +I +S  T A+
Sbjct: 354 AAYIEIF--RGTPMMVQAILIFYGA------KQFLAIDMSTM----LAAFIIVSINTGAY 401

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR G+ +V  GQ EA  ALG+TH +    V++PQ ++SI+P + ++++  +K++S+
Sbjct: 402 LAEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPAIANEFVVNIKDTSV 461

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   +L  V  +I   T Q  +  LI   IY  L+ +    +  L  ++  KE
Sbjct: 462 LNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFVTTRIILLLERRLNNKE 517



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 12/85 (14%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICR 130
           S Y++  + G  +T +++    I    IG +V   R +              K++ +I  
Sbjct: 295 SEYSSLFINGIFSTLFISIISTIIGFFIGLVVAVIRKTNVDKNKNIIGYVLQKIINFILA 354

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSV 155
            Y+E+FR  P +V    ++      
Sbjct: 355 AYIEIFRGTPMMVQAILIFYGAKQF 379


>gi|323342023|ref|ZP_08082256.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322464448|gb|EFY09641.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 537

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/244 (22%), Positives = 107/244 (43%), Gaps = 22/244 (9%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGI-VLSLFATRLS------ 208
           +P         +  NN  L    L +     +    F  ++G+ +  L   ++S      
Sbjct: 283 MPSGFFAGVGFLIQNNWKLFLNGLGITLLIALTGTSFGLIIGLFIAGLRQIKISDRDKGI 342

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
               ++    +   Y+    + G P +V   L Y               G         +
Sbjct: 343 TRLFKRIMNVIVTAYVQ--YLRGTPMMVQGILIYY-----------GLRGLEVAISPLTA 389

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +S  T+A+++EI+R+G+ A+ +GQ EAA +LG+T  +  R V+LPQA+R+ IP + 
Sbjct: 390 GIIIISINTSAYMSEIIRAGIQAIDKGQNEAARSLGMTEAQTLRYVILPQAIRNAIPAIG 449

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++  +K+SS+   +  ++L   G  +     + +E   I   IYL L+I     +N +
Sbjct: 450 NEFVVNIKDSSVLNVITVSELFFQGNRLTGIYYRQMEPFFIVSLIYLVLTICSTQILNMI 509

Query: 389 NAKI 392
             ++
Sbjct: 510 EKRM 513



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 14/83 (16%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLV-------------GAGRLSANKLVAWIC 129
            +     L G   T  +A +G     IIG  +             G  RL   +++  I 
Sbjct: 296 QNNWKLFLNGLGITLLIALTGTSFGLIIGLFIAGLRQIKISDRDKGITRLFK-RIMNVIV 354

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
             YV+  R  P +V    +Y  +
Sbjct: 355 TAYVQYLRGTPMMVQGILIYYGL 377


>gi|21223626|ref|NP_629405.1| permease [Streptomyces coelicolor A3(2)]
 gi|256785263|ref|ZP_05523694.1| permease [Streptomyces lividans TK24]
 gi|289769154|ref|ZP_06528532.1| ABC-type amino acid transport system, permease [Streptomyces
           lividans TK24]
 gi|9968709|emb|CAC05960.1| permease [Streptomyces coelicolor A3(2)]
 gi|289699353|gb|EFD66782.1| ABC-type amino acid transport system, permease [Streptomyces
           lividans TK24]
          Length = 316

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 68/236 (28%), Positives = 112/236 (47%), Gaps = 5/236 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +G   +          M     I V + ++G+V  +    + R        ++   YI
Sbjct: 56  INWGAIPDYFFDDRVLTGMGKTLLITVLAMLIGVVGGILL-AVMRLSKNPVTSSIAWFYI 114

Query: 225 STFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             F   G P LV + + + L   F+   LG F     S     F++  + L    AA++A
Sbjct: 115 WFF--RGTPVLVQLVVWFNLGLVFEYINLGPFYRDEWSDFMTPFLTALLGLGLNEAAYMA 172

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+GL+AV  GQ EAA ALG++H K  R +++PQAMR I+PP  ++ +N+LK +SL  
Sbjct: 173 EICRAGLLAVDEGQTEAAHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINMLKTTSLVS 232

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V +A+L  V   I   +G   E++ +    YL L+ + ++    L    A    +
Sbjct: 233 VVQYAELFRVAQDIGQTSGAPAEMLFLAAAWYLLLTSVFSVGQYYLERYYARGSSR 288



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     +L G   T  +    M+   + G L+   RLS N + + 
Sbjct: 49  YAFSQGKINWGAIPDYFFDDRVLTGMGKTLLITVLAMLIGVVGGILLAVMRLSKNPVTSS 108

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I   Y+  FR  P LV +   +   L    I                 L
Sbjct: 109 IAWFYIWFFRGTPVLVQLVVWFNLGLVFEYINLGPFYRDEWSDFMTPFL 157


>gi|88856305|ref|ZP_01130964.1| ABC transporter permease protein [marine actinobacterium PHSC20C1]
 gi|88814389|gb|EAR24252.1| ABC transporter permease protein [marine actinobacterium PHSC20C1]
          Length = 319

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 8/254 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++  L   + SV+   +    + F        L     T+   A   +    LG++L++
Sbjct: 37  LIVVALGALIWSVITNDNIRWEIVFENLTGATILRGLGTTLLLTAIAMLIGLTLGVLLAI 96

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGST 261
                +R    +  + +   YI  F   G P LV + L + L    P L      +  + 
Sbjct: 97  -----ARLSKNRVMQTVSSGYIWLF--RGTPLLVQLLLWFNLALFFPRLGFGELSVDTNV 149

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +   F +  + L     A++AEIVR G+ +V RGQ+EAA ALG+  R  T  ++LPQAMR
Sbjct: 150 IITAFGAAILGLGLNEGAYMAEIVRGGIQSVNRGQIEAAAALGMRQRHVTWRIVLPQAMR 209

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            IIPP+ +  + +LK +SL   +   DL++    I  +     E++++    YL ++ + 
Sbjct: 210 VIIPPIGNNLITMLKMTSLVSVIAVPDLLNRAQAISAKNFYVFEMLIVATVWYLLMTTIF 269

Query: 382 ALFMNRLNAKIALK 395
            +   +L  +    
Sbjct: 270 TIIQMQLEKRFDRG 283



 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%)

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
              M+    +G L+   RLS N+++  +   Y+ +FR  P LV +   +   L
Sbjct: 81  AIAMLIGLTLGVLLAIARLSKNRVMQTVSSGYIWLFRGTPLLVQLLLWFNLAL 133


>gi|326804127|ref|YP_004321945.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650473|gb|AEA00656.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 495

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 15/252 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V   +    +       + ++             +    +     I V + + GI+L L 
Sbjct: 258 VNACVESGQMDQWMEESYDLIRQSQKSNWLSYWPYFYDGIKVTLLISVVAILAGIILGLI 317

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L R  +      L   Y+    + G P +V +               F  +G     
Sbjct: 318 I-VLMRISNLPVLPQLASAYVEF--VRGTPLMVQVLFV------------FLGVGALFSL 362

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              +S  IA+S   AA+I+EI R G+++V RGQ+EAA +LGL +    + V+ PQ++R +
Sbjct: 363 SSLLSGIIAVSLNAAAYISEIFRGGILSVDRGQVEAARSLGLNYWTTMKKVVFPQSLRPV 422

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L ++   L+K+SS+   +G A+L      + + T Q    + I M  Y  L+ + ++
Sbjct: 423 WPSLVNEAATLIKDSSIVSTIGVAELTFQTRAVTSLTYQGTIPLFISMCCYFVLTFVTSM 482

Query: 384 FMNRLNAKIALK 395
            +     K+  K
Sbjct: 483 ALRLYENKMQAK 494



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY      G   T  ++   ++   I+G ++   R+S   ++  +   YVE  R  P +V
Sbjct: 288 SYWPYFYDGIKVTLLISVVAILAGIILGLIIVLMRISNLPVLPQLASAYVEFVRGTPLMV 347

Query: 144 VIFFLYKSV 152
            + F++  V
Sbjct: 348 QVLFVFLGV 356


>gi|303256934|ref|ZP_07342948.1| glutamine ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|330998815|ref|ZP_08322542.1| glutamine ABC transporter, permease protein GlnP [Parasutterella
           excrementihominis YIT 11859]
 gi|302860425|gb|EFL83502.1| glutamine ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|329576029|gb|EGG57548.1| glutamine ABC transporter, permease protein GlnP [Parasutterella
           excrementihominis YIT 11859]
          Length = 223

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 13/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L   + +    L           +I   S  LG+++ +F   +++    +  + L  +
Sbjct: 1   MALELNLSIITENLPLLLKGAGITLEITALSVGLGLLIGMFVG-VAKLSDNRLIRGLASV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I G P LV I L Y   F  P +              F++   A S  + A++A
Sbjct: 60  YVD--CIRGTPLLVQIFLVY---FALPQIIG-------HRIDPFVAAVGACSINSGAYVA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+G+ ++ +GQMEA+ ALGL   +A R V++PQA + IIPPL ++++ +LK+SSL  
Sbjct: 108 EIFRAGIQSIDKGQMEASRALGLNWFQAMRFVIMPQAFKRIIPPLGNEFIAMLKDSSLVS 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +GF +L   G  II++T  A EI ++   +YL +++ I+ F+  L  + +   +K
Sbjct: 168 VIGFEELTRTGQLIISRTYAAFEIWIVVALLYLIMTLAISRFVALLEKRFSKGTRK 223



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +    +IG  VG  +LS N+L+  +  VYV+  R  P LV IF +
Sbjct: 17  LLKGAGITLEITALSVGLGLLIGMFVGVAKLSDNRLIRGLASVYVDCIRGTPLLVQIFLV 76

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y ++  ++       V   G
Sbjct: 77  YFALPQIIGHRIDPFVAAVG 96


>gi|54308669|ref|YP_129689.1| amino acid ABC transporter permease [Photobacterium profundum SS9]
 gi|46913098|emb|CAG19887.1| hypothetical amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 315

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 15/213 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI + S    +++ L A  L R  +    K L  LY+   +I G P L+ I + Y 
Sbjct: 118 WVTLKISIISLFFAVIIGLVAG-LMRISNNPVTKNLSFLYVE--IIRGTPLLIQIFIVY- 173

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F+G       F +  +ALS +T A+IAEI+RSG+ ++P GQMEAA +L
Sbjct: 174 -----------FFLGTIFDLERFTAGVVALSVFTGAYIAEIIRSGIQSIPPGQMEAARSL 222

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ + KA   V+LPQA +  +PP+  Q + L+K+SSL   +   DL   G  +I+ +   
Sbjct: 223 GMNYPKAMAYVILPQAFKRTLPPMAGQLITLIKDSSLVSVISITDLTKAGREVISGSFAT 282

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            E+  +   +YL L+I ++  + R+  ++A  +
Sbjct: 283 FEVWFVVAGLYLLLTISLSWVVQRIEKRLASSD 315



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +++G   T  ++   +  A IIG + G  R+S N +   +  +YVE+ R  P L+ IF +
Sbjct: 113 LILGLWVTLKISIISLFFAVIIGLVAGLMRISNNPVTKNLSFLYVEIIRGTPLLIQIFIV 172

Query: 149 YK 150
           Y 
Sbjct: 173 YF 174


>gi|317484847|ref|ZP_07943739.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316923893|gb|EFV45087.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 264

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 15/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                + F    +    ++ V S +  + + L    L R         +   Y+   +I 
Sbjct: 50  PYLEIVKFLPDGLIITFEVTVLSLLCTLPIGLLTG-LGRLSRNPVINLIASTYVE--IIR 106

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV +   Y              +G     P  +S  IA+S    A++ E+ R+G++
Sbjct: 107 GVPLLVQLFYIYY------------ALGRIIQVPPMVSAVIAISFCYGAYMGEVFRAGIL 154

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ EAA +LG  + +   LV+LPQAMR+I+PP+ ++ + +LK++SL   +  ADL+
Sbjct: 155 SVPKGQTEAARSLGFNNFQTMTLVILPQAMRTILPPIGNECIAMLKDTSLVSIIAVADLL 214

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G    +QT    E   +   +YL ++++++  ++ +  ++   ++
Sbjct: 215 RRGREFASQTFDYFETYTVIALVYLIITLLLSKGVSMMEGRLTYYDR 261



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 39/69 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++    IG L G GRLS N ++  I   YVE+ R +P LV +F++Y +
Sbjct: 61  GLIITFEVTVLSLLCTLPIGLLTGLGRLSRNPVINLIASTYVEIIRGVPLLVQLFYIYYA 120

Query: 152 VLSVLPIPD 160
           +  ++ +P 
Sbjct: 121 LGRIIQVPP 129


>gi|227485353|ref|ZP_03915669.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus lactolyticus ATCC 51172]
 gi|227236644|gb|EEI86659.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus lactolyticus ATCC 51172]
          Length = 524

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 112/259 (43%), Gaps = 15/259 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++   +  +     P    + V       ++  L     T+       +  F++G+++++
Sbjct: 259 IMTEMVAITTKDEAPKSFITEVKDIWNKYSSLFLKGVVNTLFIAILSTILGFIIGLLVAI 318

Query: 203 FATRLSRHFHEKTGKALP-----LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
                        G         LL +   +  G P +V   + +        L Q+  I
Sbjct: 319 IRRIDVNKKTNPIGFYFHKLVNILLSVYVEVFRGTPMMVQSVIIFY------GLKQYFDI 372

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             ST+     +  + +S  T A+++E+VR G+ AV  GQ EA  A+GLT+ +A   ++LP
Sbjct: 373 DLSTMF----AAILIVSINTGAYLSEVVRGGINAVDSGQFEACKAIGLTNWQAMTGIILP 428

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q +++I+P L ++++  +K++S+   +   +L  +  +I   T Q     LI   IYL L
Sbjct: 429 QTIKTILPSLGNEFVINIKDTSVLNVISVTELFFMSKSIAGSTYQYFPTYLITAVIYLVL 488

Query: 378 SIMIALFMNRLNAKIALKE 396
           +  I   +  +  +   ++
Sbjct: 489 TFTITRLLLLIERRFNDRD 507



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 12/84 (14%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR------------LSANKLVAWICRVY 132
           Y++  L G VNT ++A    I   IIG LV   R               +KLV  +  VY
Sbjct: 287 YSSLFLKGVVNTLFIAILSTILGFIIGLLVAIIRRIDVNKKTNPIGFYFHKLVNILLSVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           VEVFR  P +V    ++  +    
Sbjct: 347 VEVFRGTPMMVQSVIIFYGLKQYF 370


>gi|302554086|ref|ZP_07306428.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471704|gb|EFL34797.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
          Length = 315

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 5/250 (2%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
           ++L  +        + +G   +          +     + V S  +GIV  +    + R 
Sbjct: 41  ALLGGIVYAFSQGKINWGAIPDYFFDDRILDGVGKTLLLTVLSMAIGIVGGVLL-AVMRL 99

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMS 268
                  ++   YI  F   G P LV + + + L   F+   LG       S     F++
Sbjct: 100 SKNPVTSSIAWFYIWFF--RGTPVLVQLIVWFNLGLVFEYINLGPLYKDEWSDFMTPFLT 157

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L    AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+PP  
Sbjct: 158 ALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHAKTLRRIVIPQAMRVIVPPTG 217

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ +N+LK +SL   V + +L+     I   +G   E++ +    YL L+ + ++    L
Sbjct: 218 NEVINMLKTTSLVSVVQYPELLRAAQDIGQTSGAPAEMLFLAASWYLLLTSVFSVGQYYL 277

Query: 389 NAKIALKEKK 398
               A    +
Sbjct: 278 ERYYARGSSR 287



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 2/109 (1%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     IL G   T  L    M    + G L+   RLS N + + 
Sbjct: 48  YAFSQGKINWGAIPDYFFDDRILDGVGKTLLLTVLSMAIGIVGGVLLAVMRLSKNPVTSS 107

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I   Y+  FR  P LV +   +   L    I    +            L
Sbjct: 108 IAWFYIWFFRGTPVLVQLIVWFNLGLVFEYINLGPLYKDEWSDFMTPFL 156


>gi|227879036|ref|ZP_03996929.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844250|ref|ZP_05549736.1| ABC amino acid transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256849349|ref|ZP_05554782.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|262047629|ref|ZP_06020583.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|227861370|gb|EEJ68996.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613328|gb|EEU18531.1| ABC amino acid transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256714125|gb|EEU29113.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|260572029|gb|EEX28595.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
          Length = 537

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 115/238 (48%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLN 346

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 347 VVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 394

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  
Sbjct: 395 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVN 454

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  ++
Sbjct: 455 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKRL 512



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G I    IG LVG  R               +V W+  VYV
Sbjct: 297 QYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLNVVKWLLSVYV 356

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 357 EIFRGTPMMVQAAVIYYGIAQFWH 380


>gi|227501171|ref|ZP_03931220.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
 gi|227216572|gb|EEI81976.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
          Length = 521

 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 109/257 (42%), Gaps = 19/257 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++      +          S V       +   L     TM       +  F++G+++++
Sbjct: 261 IMAKMTKLTANEKESTGFISEVKSIWSTYSGLFLKGVVNTMFIAVVSTILGFLIGLIVAV 320

Query: 203 FATRLSR-------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
                 +       ++  K   A+   Y+  F   G P +V   + +        L Q+ 
Sbjct: 321 IRRLEVKKTDNVISYYFHKIINAILAAYVEIF--RGTPMMVQSVIIFY------GLKQYF 372

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            I  ST+     +  + +S  T A+++E+VR G+ ++ +GQ EA  A+G+TH +    V+
Sbjct: 373 DIDLSTIF----AAVLIVSINTGAYLSEVVRGGINSINKGQFEACKAIGMTHFQTMIHVI 428

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ + +I+P L ++++  +K++S+   +   +L  +  ++   T Q     LI   IY 
Sbjct: 429 LPQTILTILPSLGNEFVINIKDTSVLNVISVTELFFMSKSVAGSTYQYFPTYLITAVIYF 488

Query: 376 SLSIMIALFMNRLNAKI 392
            L+  I   +  L  + 
Sbjct: 489 VLTFTITRILLVLEKRF 505



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 12/86 (13%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA------------NKLVAWICR 130
           S+Y+   L G VNT ++A    I   +IG +V   R               +K++  I  
Sbjct: 287 STYSGLFLKGVVNTMFIAVVSTILGFLIGLIVAVIRRLEVKKTDNVISYYFHKIINAILA 346

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVL 156
            YVE+FR  P +V    ++  +    
Sbjct: 347 AYVEIFRGTPMMVQSVIIFYGLKQYF 372


>gi|294618488|ref|ZP_06698052.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1679]
 gi|291595245|gb|EFF26574.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1679]
          Length = 540

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 19/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPL 221
                N  L    LT+       V    LG+++ +F         L+R F  K G AL  
Sbjct: 304 WKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQ-KIGNALLS 362

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F   G P +V   + +                G +++    +L+I +S  T A++
Sbjct: 363 IYVEVF--RGTPMMVQAMVIFY---------GLALAFGISLNRTIAALFI-VSLNTGAYM 410

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++ 
Sbjct: 411 TEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVL 470

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 471 SVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 521



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              K+   +  +YV
Sbjct: 306 QYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNALLSIYV 365

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 366 EVFRGTPMMVQAMVIFYGLALAF 388


>gi|322387247|ref|ZP_08060857.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
 gi|321141776|gb|EFX37271.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
          Length = 543

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFL 228
             + L    +T+  +    +   V+G+ + +F T     +  F+        +L I   +
Sbjct: 312 WQQLLRGAGITLLISIIGTIVGLVIGLAIGVFRTAPQSENHFFYVIQNIVGWILNIYIEI 371

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 372 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 421

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 422 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 481

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 482 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRYIEKRM 525



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVY 132
           S     +L G   T  ++  G I   +IG  +G  R +             +V WI  +Y
Sbjct: 309 SENWQQLLRGAGITLLISIIGTIVGLVIGLAIGVFRTAPQSENHFFYVIQNIVGWILNIY 368

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 369 IEIFRGTPMIVQSMVIYYGTAQAF 392


>gi|288904530|ref|YP_003429751.1| ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus gallolyticus
           UCN34]
 gi|306830524|ref|ZP_07463692.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977501|ref|YP_004287217.1| inner membrane amino-acid ABC transporter permease yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|288731255|emb|CBI12805.1| putative ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus gallolyticus
           UCN34]
 gi|304427318|gb|EFM30422.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177429|emb|CBZ47473.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 523

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/289 (19%), Positives = 113/289 (39%), Gaps = 18/289 (6%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
              VG  R    +++A +  V   +  +    ++   + +         ++S        
Sbjct: 228 AIAVGL-RKDDTEMLAKVNAVLAGISEDERLELMDKMIEEQPSDNSEEDENSNFFTDMWT 286

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKAL-----PLLY 223
           +     +           I +   V+G+ + L     R +     K    L      +L 
Sbjct: 287 IFKNNWNQFLRGAGVTLFISIIGTVVGLFIGLLIGVYRTAPKAANKVLAGLQKAFGWVLN 346

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   +  G P +V   + Y                        ++  + +S  T A+++E
Sbjct: 347 VYIEVFRGTPMIVQAMVIYYGTAQA----------FGISIDRTLAAVLIVSINTGAYMSE 396

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   
Sbjct: 397 IVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNV 456

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 457 ISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRFIERRF 505



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T +++  G +    IG L+G  R +            K   W+  VY+EV
Sbjct: 292 WNQFLRGAGVTLFISIIGTVVGLFIGLLIGVYRTAPKAANKVLAGLQKAFGWVLNVYIEV 351

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 352 FRGTPMIVQAMVIYYGTAQAF 372


>gi|318061946|ref|ZP_07980667.1| ABC transporter permease [Streptomyces sp. SA3_actG]
 gi|318078798|ref|ZP_07986130.1| ABC transporter permease [Streptomyces sp. SA3_actF]
          Length = 345

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           + I  L V+  L  +V S+         +    F  +  L    LT+   A + V  FVL
Sbjct: 83  QWIAALFVLLLLAMAVNSLARNKAFQWDVVADYFTTSAVLRGLGLTLWLTALVMVLGFVL 142

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKP 249
           G +L+L      R         +   YI  F     P LV +   +       QL    P
Sbjct: 143 GTLLAL-----GRMSSNPVLSWVSSGYIWFF--RSTPILVQLLFWFNIGALYPQLGLGIP 195

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              +F  +    +        + L+ + AA+ AE+VR GL++V RGQ+EAA +LGL+  +
Sbjct: 196 FGPEFVTVKTVNLLGPVTVAVLGLTLHEAAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWR 255

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQAMR+I+PP  +  +  LK +S+   +   DL+     + ++T Q I ++L+
Sbjct: 256 RLRRIVLPQAMRAIVPPAGNMLIGALKGTSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLV 315

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y  ++ ++++  + +    A   ++
Sbjct: 316 ATIWYALVTSVLSVGQHYVEKHYARGAER 344



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T WL    M+   ++GTL+  GR+S+N +++W+   Y+  FR+ P LV + F
Sbjct: 120 AVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSSNPVLSWVSSGYIWFFRSTPILVQLLF 179

Query: 148 LYKSV 152
            +   
Sbjct: 180 WFNIG 184


>gi|309799781|ref|ZP_07693993.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
 gi|308116601|gb|EFO54065.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
          Length = 521

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI-- 229
             + L    +T+  +    +   V+G+ + +F T          G    + +I    I  
Sbjct: 290 WQQLLRGAGITLLISIIGTIVGLVIGLAIGVFRTAPLSENQFIFGIQKLIGWILNIYIEI 349

Query: 230 -FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 350 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 399

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +++V +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 400 ILSVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 459

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 460 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIEKRM 503



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
              +L G   T  ++  G I   +IG  +G  R +            KL+ WI  +Y+E+
Sbjct: 290 WQQLLRGAGITLLISIIGTIVGLVIGLAIGVFRTAPLSENQFIFGIQKLIGWILNIYIEI 349

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 350 FRGTPMIVQSMVIYYGTAQAF 370


>gi|161506724|ref|YP_001576674.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|160347713|gb|ABX26387.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
          Length = 537

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       V  F +G+++ +  T        + +   
Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLIGIVRTIPTPTTRGKRWALN 346

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        L     I          +  I +S
Sbjct: 347 VVKWLLSVYVEIF--RGTPMMVQAAVIYYGIAQFWHLNLNRTI----------AALIIVS 394

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++++  
Sbjct: 395 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHSQKMWHIILPQAIKNCLPSITNEFIVN 454

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  K+
Sbjct: 455 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKKL 512



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G +    IG L+G  R               +V W+  VYV
Sbjct: 297 QYGGMIMSGIGMTLLLALVGTVVGFFIGLLIGIVRTIPTPTTRGKRWALNVVKWLLSVYV 356

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 357 EIFRGTPMMVQAAVIYYGIAQFWH 380


>gi|50119798|ref|YP_048965.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49610324|emb|CAG73768.1| ABC transporter permease protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 313

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  L+V+  L     SVL  P     +    F  +  L    +T+   A   V  F  
Sbjct: 20  RWLSALLVLLLLGAIAHSVLNNPRFEWRVVVDSFTEDSILQGVIMTLKLTAMSVVLGFGG 79

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKP 249
           G +L+L      R        A+   Y   F   G+PTLV + L Y +           P
Sbjct: 80  GTILALM-----RLSSNPVLVAVSCGYTWFF--RGVPTLVQLFLWYNIAALYPTISLSLP 132

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             G+   + G+T+   F +  +AL  + +A+ AEIVR+G+ +V  GQ+EAA ALG    +
Sbjct: 133 FFGEVFSVPGNTLISPFNAAVLALVMHQSAYAAEIVRAGIQSVNPGQLEAARALGYRKPQ 192

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
                ++PQAMR+I+PP  ++ +  LK +++   +   D++     I  +T + I ++L+
Sbjct: 193 IFFYTVMPQAMRAILPPAGNEVIGQLKTTAVVSVISLQDVLYSAQIIYQRTYEVIPLLLV 252

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               YL L+ ++++    +       
Sbjct: 253 ATIWYLLLTSVLSVGQYYIERYFGRS 278



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 40/113 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L    ++     GT++   RLS+N ++  +   Y   FR +P LV +F  
Sbjct: 58  ILQGVIMTLKLTAMSVVLGFGGGTILALMRLSSNPVLVAVSCGYTWFFRGVPTLVQLFLW 117

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y        I            +    L  P         +   ++   IV +
Sbjct: 118 YNIAALYPTISLSLPFFGEVFSVPGNTLISPFNAAVLALVMHQSAYAAEIVRA 170


>gi|269219463|ref|ZP_06163317.1| ABC amino acid transporter, permease component [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269211042|gb|EEZ77382.1| ABC amino acid transporter, permease component [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 372

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 70/271 (25%), Positives = 120/271 (44%), Gaps = 12/271 (4%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF--- 190
           ++ R IP      +L  ++L++L       V     F                A  +   
Sbjct: 61  QLIRAIPVPHYGRWLAAAILALLAAMGIHSVATNKNFHWELIWKTLFTVEIFRAIGWTLI 120

Query: 191 --VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF----LIFGLPTLVLIALKYQ- 243
             V +  +GIVL++    + R       +A+   YI  F    +   L    LI + Y  
Sbjct: 121 LTVAAMAIGIVLAIL-MAIMRRSDNPIMRAVATFYIWFFRGTPVYTQLIFWGLIGVLYPR 179

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P   +F       +    +S  + L     A+++EI+RSGL +V +GQ EAA AL
Sbjct: 180 LSLGVPFGEEFFSFRTYDLFTAAVSAIVGLGLNEGAYLSEIIRSGLNSVDKGQEEAAQAL 239

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQ 362
           G++ R+    +++PQAMR I+PP  ++ +++LK +SL  AV F  +L  V     +QT  
Sbjct: 240 GMSPRQILYRIIIPQAMRVIVPPTGNETISMLKTTSLVTAVPFTFELTKVATDYGSQTLL 299

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I  +++    YL ++ ++ +   RL A   
Sbjct: 300 PIPFLVVAAIWYLVITSVLMIGQARLEAYYG 330



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 7/108 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I      T  L  + M    ++  L+   R S N ++  +   Y+  FR  P    + F 
Sbjct: 111 IFRAIGWTLILTVAAMAIGIVLAILMAIMRRSDNPIMRAVATFYIWFFRGTPVYTQLIFW 170

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
               +           L  G+       SF T  + T A   +    L
Sbjct: 171 GLIGVLYPR-------LSLGVPFGEEFFSFRTYDLFTAAVSAIVGLGL 211


>gi|312865611|ref|ZP_07725836.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098879|gb|EFQ57098.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 514

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 3/219 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                          I +   ++G+V+ L      R   +   KAL LL      I  + 
Sbjct: 288 NNWHQFLRGTGITLLISIVGTLVGLVIGLLIGVY-RTAPQAGNKALALLQKVFGWILNVY 346

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             + I     +     V+                +    +S  T A+++EIVR G+ AV 
Sbjct: 347 --IEIFRGTPMIVQAMVIYYGTAQAFGVNLDRTWAAIFIVSINTGAYMSEIVRGGIYAVD 404

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA ALG +H +  R V+LPQ +R+I+P   ++++  +K++S+   +   +L   G
Sbjct: 405 KGQFEAATALGFSHGQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSG 464

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            T+  QT +  +  LI   IY  L+  +   +  L  ++
Sbjct: 465 NTVATQTYKYFQTFLIIAVIYFILTFTVTRILRYLEHRL 503



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVEV 135
               L G   T  ++  G +   +IG L+G  R +            K+  WI  VY+E+
Sbjct: 290 WHQFLRGTGITLLISIVGTLVGLVIGLLIGVYRTAPQAGNKALALLQKVFGWILNVYIEI 349

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 350 FRGTPMIVQAMVIYYGTAQAF 370


>gi|306832761|ref|ZP_07465897.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304425110|gb|EFM28240.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 523

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 57/289 (19%), Positives = 113/289 (39%), Gaps = 18/289 (6%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
              VG  R    +++A +  V   +  +    ++   + +         ++S        
Sbjct: 228 AIAVGL-RKDDTEMLAKVNAVLAGISEDERLELMDKMIEEQPSDNSEEDENSNFFTDMWT 286

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKAL-----PLLY 223
           +     +           I +   V+G+ + L     R +     K    L      +L 
Sbjct: 287 IFKNNWNQFLRGAGVTLFISIIGTVVGLFIGLLIGVYRTAPKAANKVLAGLQKAFGWVLN 346

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   +  G P +V   + Y                        ++  + +S  T A+++E
Sbjct: 347 VYIEVFRGTPMIVQAMVIYYGTAQA----------FGISIDRTLAAVLIVSINTGAYMSE 396

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   
Sbjct: 397 IVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNV 456

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 457 ISVVELYFSGNTVATQTYQYFQTFTIIAIIYFILTFTVTRILRFIERRF 505



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T +++  G +    IG L+G  R +            K   W+  VY+EV
Sbjct: 292 WNQFLRGAGVTLFISIIGTVVGLFIGLLIGVYRTAPKAANKVLAGLQKAFGWVLNVYIEV 351

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 352 FRGTPMIVQAMVIYYGTAQAF 372


>gi|262283287|ref|ZP_06061053.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA]
 gi|262260778|gb|EEY79478.1| amino acid-binding permease [Streptococcus sp. 2_1_36FAA]
          Length = 521

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 17/257 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++   + K  +   P  +    L     +                 I +   + G+++ L
Sbjct: 256 LMDEMIKKQPVEKTPAKEKQNFLKEVTKIWQENWPQFLRGAGLTLLISITGTITGLLIGL 315

Query: 203 FA--TRLSRHFHEKTGKALPLLYISTF-----LIFGLPTLVLIALKYQLHFDKPVLGQFN 255
                R +     K    L  L+         +  G P +V   + Y             
Sbjct: 316 LIGVFRTAPTSKNKALAILQKLFGWFLNVYIEIFRGTPMIVQSMVIYYGSAQA------- 368

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                      ++    +S  T A+++EIVR G+ AV +GQ EAA ALG+TH +  R ++
Sbjct: 369 ---FGISIDRTIAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQTMRKIV 425

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ +R+I+P   ++++  +K++S+   +   +L   G TI  QT +  +   I   IY 
Sbjct: 426 LPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTIATQTYKYFQTFTIIAVIYF 485

Query: 376 SLSIMIALFMNRLNAKI 392
            L+  I   +  +  + 
Sbjct: 486 VLTFTITRILRYVEHRF 502



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++ +G I   +IG L+G  R +            KL  W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTITGLLIGLLIGVFRTAPTSKNKALAILQKLFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGSAQAF 369


>gi|257790888|ref|YP_003181494.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|257474785|gb|ACV55105.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
          Length = 566

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                   +   T   I V + V+ + L +    LS        + +  +Y+   ++  +
Sbjct: 14  FERWPDILMAFGTTVGISVLALVIALALGIVFGVLS-VSRIPVLRGITRVYVE--VVQNV 70

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + + Y +         F  +G S     F    +A+  Y   +I+E+VRSG+ ++
Sbjct: 71  PLLLQVFVFYAI---------FPLLGLSL--AAFWIGVLAIGIYHGGYISEVVRSGIGSI 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA + G ++ ++  +++LPQA+R I+PPL  Q  NL+KN+S+   +   +L+  
Sbjct: 120 HRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQAANLVKNTSVLALIAGGELMYF 179

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +    T     + ++   +Y ++   ++     L  +
Sbjct: 180 SNSFAGATSYYGPVYVVAALLYFAICFPLSRLALYLEHR 218



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 18/213 (8%)

Query: 78  PYTSDSSYATA--ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           PY  ++ +     IL+ F  T  ++   ++ A  +G + G   +S   ++  I RVYVEV
Sbjct: 7   PYKWEALFERWPDILMAFGTTVGISVLALVIALALGIVFGVLSVSRIPVLRGITRVYVEV 66

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN---------RGLSFPTLTMDTN 186
            +N+P L+ +F  Y     +        +    + + +          G+          
Sbjct: 67  VQNVPLLLQVFVFYAIFPLLGLSLAAFWIGVLAIGIYHGGYISEVVRSGIGSIHRGQFEA 126

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           AK   FS+   + + +    +            PL   +  L+     L LIA    ++F
Sbjct: 127 AKSQGFSYWQSMFVIILPQAIRIIMP-------PLAVQAANLVKNTSVLALIAGGELMYF 179

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
                G  ++ G   V    +   I       A
Sbjct: 180 SNSFAGATSYYGPVYVVAALLYFAICFPLSRLA 212


>gi|297202327|ref|ZP_06919724.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
 gi|197710153|gb|EDY54187.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
          Length = 312

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 5/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + + ++G+VL +    + R         +   YI  F   G P  V + L + L  
Sbjct: 79  LLISILAMIVGVVLGVLL-AVMRLSKNPVTSWVAWAYIWFF--RGTPVYVQLLLWFNLAL 135

Query: 247 DKPVLGQFNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P+L          + V   FM   + L    AA++AEI R+GL+AV  GQ EAA ALG
Sbjct: 136 IFPMLNLGPIYKDEMTDVMTPFMCALLGLGLNEAAYMAEICRAGLMAVDEGQTEAAHALG 195

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++H K  R +++PQAMR I+PP  ++++N+LK SSL  AV + +L+    TI + +   +
Sbjct: 196 MSHGKTLRRIVIPQAMRVIVPPTGNEFINMLKTSSLVYAVTYNELLRATSTIGSTSYAVM 255

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E++ +    YL ++ + ++F   L  + A    +
Sbjct: 256 EMLFVASIWYLVMTSVFSVFQYYLERRFARGSSR 289



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 33/88 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  ++   MI   ++G L+   RLS N + +W+   Y+  FR  P  V +   +
Sbjct: 72  LAGAGRTLLISILAMIVGVVLGVLLAVMRLSKNPVTSWVAWAYIWFFRGTPVYVQLLLWF 131

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
              L    +    I       +    + 
Sbjct: 132 NLALIFPMLNLGPIYKDEMTDVMTPFMC 159


>gi|319939707|ref|ZP_08014065.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV]
 gi|319811125|gb|EFW07434.1| amino acid-binding permease [Streptococcus anginosus 1_2_62CV]
          Length = 521

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 3/218 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         I +   + G+++ L    +  +    T K   L  + T   + L  
Sbjct: 288 NWPQFLRGAGLTLLISITGTIAGLIIGLL---IGVYRTAPTAKNKALALLQTLFGWFLNV 344

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            + I     +     V+               ++    +S  T A+++EIVR G+ AV +
Sbjct: 345 YIEIFRGTPMIVQSMVIYYGTAQAFGVSIDRTIAAIFIVSINTGAYMSEIVRGGIFAVDK 404

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++  +K++S+   +   +L   G 
Sbjct: 405 GQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGN 464

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 465 TIATQTYQYFQTFTIIAVIYFVLTFTVTRILRYVERRF 502



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R +             L  W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPTAKNKALALLQTLFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|322391487|ref|ZP_08064956.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
 gi|321145570|gb|EFX40962.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
          Length = 543

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI-- 229
             + L    +T+  +    +   ++G+ + +F T          G    + +I    I  
Sbjct: 312 WQQLLRGAGITLLISIIGTIVGLIIGLAIGVFRTAPQSENQFIFGIQKLIGWILNVYIEI 371

Query: 230 -FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 372 FRGTPMIVQAMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 421

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 422 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVE 481

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 482 LYFSGNTVATQTYQYFQTFTIIAVIYFILTFTVTRILRYIEKRM 525



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVEV 135
              +L G   T  ++  G I   IIG  +G  R +            KL+ WI  VY+E+
Sbjct: 312 WQQLLRGAGITLLISIIGTIVGLIIGLAIGVFRTAPQSENQFIFGIQKLIGWILNVYIEI 371

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 372 FRGTPMIVQAMVIYYGTAQAF 392


>gi|315037358|ref|YP_004030926.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1112]
 gi|325955825|ref|YP_004286435.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC]
 gi|312275491|gb|ADQ58131.1| putative glutamine ABC transporter [Lactobacillus amylovorus GRL
           1112]
 gi|325332390|gb|ADZ06298.1| glutamine ABC transporter [Lactobacillus acidophilus 30SC]
          Length = 537

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 115/238 (48%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALN 346

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 347 FVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 394

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  
Sbjct: 395 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVN 454

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  ++
Sbjct: 455 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKRL 512



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G I    IG LVG  R                V W+  VYV
Sbjct: 297 QYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALNFVKWLLSVYV 356

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 357 EIFRGTPMMVQAAVIYYGIAQFWH 380


>gi|121535518|ref|ZP_01667327.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermosinus carboxydivorans Nor1]
 gi|121305937|gb|EAX46870.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermosinus carboxydivorans Nor1]
          Length = 221

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 13/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   L  R             +I   S  +G+++ +F   ++R  +    +A   +Y+
Sbjct: 1   MNFDFDLVVRSFPLLLAGAGITVQITAISVGIGLLIGMFVG-MARLSNIWLLRAAATVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P LV I + Y   F  P++              F++   A    + A++AEI
Sbjct: 60  DF--LRGTPLLVQIFIIY---FAIPIVIG-------QRIDPFIAAITACGINSGAYVAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEA  +LG++  +  R ++LPQA + IIPPL ++++ +LK+SSL   +
Sbjct: 108 FRAGIQSIDKGQMEAGRSLGMSWAQTMRYIILPQAFKRIIPPLGNEFIAMLKDSSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           GF +L   G  II +T  + EI L   FIYL +++ I+  ++ L  +  + +K 
Sbjct: 168 GFEELTRRGQLIIARTYGSFEIWLTVAFIYLVMTLTISRLVDYLERRYKIDDKH 221



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 33/76 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +    +IG  VG  RLS   L+     VYV+  R  P LV IF +
Sbjct: 15  LLAGAGITVQITAISVGIGLLIGMFVGMARLSNIWLLRAAATVYVDFLRGTPLLVQIFII 74

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++  V+       +
Sbjct: 75  YFAIPIVIGQRIDPFI 90


>gi|293567831|ref|ZP_06679172.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1071]
 gi|291589416|gb|EFF21223.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1071]
          Length = 530

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 19/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPL 221
                N  L    LT+       V    LG+++ +F         L+R F  K G AL  
Sbjct: 294 WKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQ-KIGNALLS 352

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F   G P +V   + +                G +++    +L+I +S  T A++
Sbjct: 353 IYVEVF--RGTPMMVQAMVIFY---------GLALAFGISLNRTIAALFI-VSLNTGAYM 400

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++ 
Sbjct: 401 TEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVL 460

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 461 SVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              K+   +  +YV
Sbjct: 296 QYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNALLSIYV 355

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 356 EVFRGTPMMVQAMVIFYGLALAF 378


>gi|320008607|gb|ADW03457.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 322

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 74/277 (26%), Positives = 120/277 (43%), Gaps = 7/277 (2%)

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
            V+    V  E  R IP   V  ++   V+  L            +            T+
Sbjct: 18  PVSKATTVAPETIRAIPVRHVGRWISGVVVLALLAALVYAFSQGNIQWQAVQDKLFDDTV 77

Query: 184 DTNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              A   +   VL + L +    +    R         +  LYI  F   G P  V + L
Sbjct: 78  LAGAGRTLMISVLAMALGVVLGVVLAVMRLSRNPVTSWVAWLYIWFF--RGTPVYVQLLL 135

Query: 241 KYQLHFDKPVLGQFNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + L    PVL          + V   FM   + L+   AA++AEIVR+G+ +V  GQ E
Sbjct: 136 WFNLALIFPVLNIPFVYKDEMTDVMTPFMCALLGLALNEAAYMAEIVRAGIQSVDEGQTE 195

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A+ ALG+T  K  R V+LPQA+R IIPP  ++++N+LK SSL  AV + +L+     I +
Sbjct: 196 ASHALGMTQAKTMRRVVLPQALRVIIPPTGNEFINMLKTSSLVYAVTYNELLRSTSQIGS 255

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   +E++ +    Y+ ++ + ++    L  + A  
Sbjct: 256 TSYAVMEMLFVASIWYIVMTSVFSVGQYYLERRYARG 292



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 34/91 (37%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  ++   M    ++G ++   RLS N + +W+  +Y+  FR  P  V + 
Sbjct: 75  DTVLAGAGRTLMISVLAMALGVVLGVVLAVMRLSRNPVTSWVAWLYIWFFRGTPVYVQLL 134

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
             +   L    +    +       +    + 
Sbjct: 135 LWFNLALIFPVLNIPFVYKDEMTDVMTPFMC 165


>gi|186686345|ref|YP_001869541.1| polar amino acid ABC transporter inner membrane subunit [Nostoc
           punctiforme PCC 73102]
 gi|186468797|gb|ACC84598.1| polar amino acid ABC transporter, inner membrane subunit [Nostoc
           punctiforme PCC 73102]
          Length = 496

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 13/255 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV  +F   +  + +        L          + F    +       + S  LG++  
Sbjct: 255 LVTKWFSQNTAANSVSSTPAKGGLNLDFTRILPDIPFILRGIPLTLLFTLLSVTLGLIWG 314

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                L +    K    +   Y S F   G P L+ +AL Y   +  P L  ++      
Sbjct: 315 TIL-SLLKILGIKPLTWVANAYTSVF--RGTPLLLQLALVY---YATPQLTGYDI----- 363

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                 +  +  +  + A+++E +R G+ AV +GQ EAA+++G+ +      V+LPQA++
Sbjct: 364 --SALEAGVLTFTLNSGAYMSETIRGGIQAVDKGQSEAAMSMGVPYWLMMWDVILPQALK 421

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +I+P L ++ + LLK+S+L   +G  +++     +        E +L    IY  L + +
Sbjct: 422 NILPALVNETIGLLKDSALVSTIGVVEILRSAQIVGANKYIYFEPLLFAGLIYYVLVMGM 481

Query: 382 ALFMNRLNAKIALKE 396
            L  + L  ++   E
Sbjct: 482 TLGASALEKRLRESE 496



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 28/67 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T       +    I GT++   ++   K + W+   Y  VFR  P L+ +  +
Sbjct: 292 ILRGIPLTLLFTLLSVTLGLIWGTILSLLKILGIKPLTWVANAYTSVFRGTPLLLQLALV 351

Query: 149 YKSVLSV 155
           Y +   +
Sbjct: 352 YYATPQL 358


>gi|325686791|gb|EGD28816.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 521

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    LT+  +    +   ++G+++ ++ T   S++    + + +   +++ ++  
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTIAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGMTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTIATQTYQYFQTFTIIAVIYFVLTFSVTRILRYVEKRF 502



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL---SANKLVA-------WICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R    S NKL+A       W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPASKNKLLASLQKIFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|295691960|ref|YP_003600570.1| amino acid ABC transporter, permease component [Lactobacillus
           crispatus ST1]
 gi|295030066|emb|CBL49545.1| Amino acid ABC transporter, permease component [Lactobacillus
           crispatus ST1]
          Length = 537

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 115/238 (48%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVSTIVGFFIGLLVGIIRTIPTPTTRGKRWTLN 346

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 347 VVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 394

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++++  
Sbjct: 395 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNEFIVN 454

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  ++
Sbjct: 455 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKRL 512



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA    I    IG LVG  R               +V W+  VYV
Sbjct: 297 QYGGMIMSGIGMTLLLALVSTIVGFFIGLLVGIIRTIPTPTTRGKRWTLNVVKWLLSVYV 356

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 357 EIFRGTPMMVQAAVIYYGIAQFWH 380


>gi|327182662|gb|AEA31109.1| glutamine ABC transporter [Lactobacillus amylovorus GRL 1118]
          Length = 537

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 115/238 (48%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALN 346

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 347 FVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 394

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  
Sbjct: 395 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIRNCLPSITNEFIVN 454

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  ++
Sbjct: 455 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKRL 512



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G I    IG LVG  R                V W+  VYV
Sbjct: 297 QYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALNFVKWLLSVYV 356

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 357 EIFRGTPMMVQAAVIYYGIAQFWH 380


>gi|254389017|ref|ZP_05004248.1| permease [Streptomyces clavuligerus ATCC 27064]
 gi|326443324|ref|ZP_08218058.1| permease [Streptomyces clavuligerus ATCC 27064]
 gi|197702735|gb|EDY48547.1| permease [Streptomyces clavuligerus ATCC 27064]
          Length = 313

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 4/252 (1%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +   +  ++        + +G              +     + V S  +GI   +    +
Sbjct: 40  VAIGLFGLIVYAFSQGRINWGAIPEYFFDDRIVDGVKETLILTVLSMAIGIGGGILL-AV 98

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEF 266
            R        ++   YI  F   G P LV + + + L      V   F     S     F
Sbjct: 99  MRLSKNPVTSSIAWFYIWFF--RGTPVLVQLFVWFNLGLVFEYVNFGFYRDEWSDFMTPF 156

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  + L    AA++AEI R+GL++V  GQ EA+ ALG++H K  R +++PQAMR I+PP
Sbjct: 157 LTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALGMSHSKTLRRIVIPQAMRVIVPP 216

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             ++ +N+LK +SL  AV F +L      I   +G  +E+  +    YL L+ ++++   
Sbjct: 217 TGNEVINMLKTTSLVAAVQFTELFRQAQNIGQTSGAPVEMFFLAAAWYLVLTSVLSVGQY 276

Query: 387 RLNAKIALKEKK 398
            L    A    +
Sbjct: 277 YLERHYARGSTR 288



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     I+ G   T  L    M      G L+   RLS N + + 
Sbjct: 50  YAFSQGRINWGAIPEYFFDDRIVDGVKETLILTVLSMAIGIGGGILLAVMRLSKNPVTSS 109

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVL 153
           I   Y+  FR  P LV +F  +   L
Sbjct: 110 IAWFYIWFFRGTPVLVQLFVWFNLGL 135


>gi|291280398|ref|YP_003497233.1| amino acid ABC transporter permease [Deferribacter desulfuricans
           SSM1]
 gi|290755100|dbj|BAI81477.1| amino acid ABC transporter, permease [Deferribacter desulfuricans
           SSM1]
          Length = 313

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 14/190 (7%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       K L + YI   LI G P LV I + Y             FIG       F
Sbjct: 138 LMRISENPALKKLAITYIE--LIRGTPLLVQIFIFY------------FFIGTVLQLNRF 183

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +   AL+ +  A++AEIVR+G+ ++ RGQ EAA +LG+ + +  R ++LPQA++  IPP
Sbjct: 184 TAGVAALAVFAGAYVAEIVRAGIQSIHRGQTEAARSLGMNYFQTMRYIILPQALKRTIPP 243

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +  Q+++L+K+SSL   +   DL   G  ++  T Q  E+      +YL L+  ++    
Sbjct: 244 MAGQFISLIKDSSLVSVISITDLTKAGREVVTSTFQPFEVWFTVAALYLILTTTLSFLTQ 303

Query: 387 RLNAKIALKE 396
            L  ++A  +
Sbjct: 304 LLERRLAESD 313



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   T  L+   +  A IIG + G  R+S N  +  +   Y+E+ R  P LV IF  
Sbjct: 111 LLMGLYVTLKLSIISIFFAIIIGIITGLMRISENPALKKLAITYIELIRGTPLLVQIFIF 170

Query: 149 YKSV 152
           Y  +
Sbjct: 171 YFFI 174


>gi|331701148|ref|YP_004398107.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329128491|gb|AEB73044.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 715

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 17/219 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            S    T+        F+ + G+++ L     ++      G +  L+Y    L  G+P L
Sbjct: 514 WSGLQETLWLTVVSIFFATIFGVLVGLMGVVPNKFSQ---GTSTTLIY----LFRGMPLL 566

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL    Y      P L            P F++  + L+    A+IA  V+ G+ AV  G
Sbjct: 567 VLALFIYT---GIPSLTG-------QKIPAFVAGVVTLTFNEGAYIAAFVKGGIQAVDPG 616

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEA+ +LGL   KA R V+LPQ +R ++P   +Q++  LK++S+   +G  +L   G  
Sbjct: 617 QMEASRSLGLPFGKAMRKVILPQGIRIMVPSFINQFIITLKDTSILSIIGLLELTQTGKI 676

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           II +  +  ++  I   IYL +  ++    N +  +  +
Sbjct: 677 IIARNLEGFKVWTIVAAIYLIIITVLTWLSNWVQRRTKV 715



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 34/77 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G   T WL    +  ATI G LVG   +  NK         + +FR +P LV+  F
Sbjct: 512 ALWSGLQETLWLTVVSIFFATIFGVLVGLMGVVPNKFSQGTSTTLIYLFRGMPLLVLALF 571

Query: 148 LYKSVLSVLPIPDHSIV 164
           +Y  + S+      + V
Sbjct: 572 IYTGIPSLTGQKIPAFV 588


>gi|58336459|ref|YP_193044.1| glutamine ABC transporter [Lactobacillus acidophilus NCFM]
 gi|58253776|gb|AAV42013.1| putative glutamine ABC transporter [Lactobacillus acidophilus NCFM]
          Length = 537

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 116/238 (48%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
           + + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 287 NENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALN 346

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 347 FVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 394

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++++  
Sbjct: 395 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNEFIVN 454

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  ++
Sbjct: 455 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKRL 512



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G I    IG LVG  R                V W+  VYV
Sbjct: 297 QYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALNFVKWLLSVYV 356

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 357 EIFRGTPMMVQAAVIYYGIAQFWH 380


>gi|258615113|ref|ZP_05712883.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium DO]
 gi|289565909|ref|ZP_06446349.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|293556866|ref|ZP_06675427.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1039]
 gi|293563614|ref|ZP_06678058.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1162]
 gi|294614606|ref|ZP_06694510.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1636]
 gi|294621215|ref|ZP_06700400.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium U0317]
 gi|314938843|ref|ZP_07846114.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943648|ref|ZP_07850402.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314949084|ref|ZP_07852444.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314952177|ref|ZP_07855195.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314991849|ref|ZP_07857306.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996560|ref|ZP_07861597.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|289162282|gb|EFD10142.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|291592508|gb|EFF24113.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1636]
 gi|291599211|gb|EFF30243.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium U0317]
 gi|291600950|gb|EFF31241.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1039]
 gi|291604414|gb|EFF33904.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E1162]
 gi|313589301|gb|EFR68146.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593554|gb|EFR72399.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313595709|gb|EFR74554.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597685|gb|EFR76530.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313641854|gb|EFS06434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313644500|gb|EFS09080.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 530

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 19/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPL 221
                N  L    LT+       V    LG+++ +F         L+R F  K G AL  
Sbjct: 294 WKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQ-KIGNALLS 352

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F   G P +V   + +                G +++    +L+I +S  T A++
Sbjct: 353 IYVEVF--RGTPMMVQAMVIFY---------GLALAFGISLNRTIAALFI-VSLNTGAYM 400

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++ 
Sbjct: 401 TEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVL 460

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 461 SVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              K+   +  +YV
Sbjct: 296 QYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNALLSIYV 355

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 356 EVFRGTPMMVQAMVIFYGLALAF 378


>gi|241113736|ref|YP_002973571.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861944|gb|ACS59610.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 309

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L++   +     + L I  H+    + +             +  +  + V +  +GIVL 
Sbjct: 32  LLLWVAVLLIAANFLWIVAHNENFGWPVVAAYFFDPTVINGLYVSLGLTVVAMAIGIVLG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS- 260
           L    ++R  +++  ++L  L+I  F   G P LV +   Y L    P L      G + 
Sbjct: 92  LGL-AIARLSNDRLARSLASLFIWFF--RGTPLLVQLIFWYNLSTLFPQLSIAIPFGPTL 148

Query: 261 ------TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                 +V     +  + L+   AA++AEI+R GL++V RGQ E A A G+T  +A   +
Sbjct: 149 ASWETNSVITPMTAAIVGLALNEAAYMAEIIRGGLLSVDRGQFETAEAFGMTKARALWRI 208

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           ++PQAMRSI+PP  +Q ++++K +SL   +  ADL+    +I N+T + + ++L+ +  Y
Sbjct: 209 IIPQAMRSIVPPTGNQLISMIKATSLVSVIAMADLLYSVQSIYNRTFEIVPMLLVAVLWY 268

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ ++ L  + + A     E++
Sbjct: 269 LLITSILNLGQSYIEAYYGRSERR 292



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   +  L    M    ++G  +   RLS ++L   +  +++  FR  P LV + F Y  
Sbjct: 72  GLYVSLGLTVVAMAIGIVLGLGLAIARLSNDRLARSLASLFIWFFRGTPLLVQLIFWYNL 131

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
                 +       P         +  P         +   +++  I+  
Sbjct: 132 STLFPQLSIAIPFGPTLASWETNSVITPMTAAIVGLALNEAAYMAEIIRG 181


>gi|157150410|ref|YP_001450999.1| amino acid-binding permease protein [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157075204|gb|ABV09887.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 521

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 13/228 (5%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYIST 226
                 + L    LT+  +    +   ++G+++ +F T   S++      + L   +++ 
Sbjct: 285 WQENWPQFLRGAGLTLLISITGTITGLLIGLLIGVFRTAPTSKNKALAILQKLFGWFLNV 344

Query: 227 FL--IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           ++    G P +V   + Y                        ++    +S  T A+++EI
Sbjct: 345 YIEIFRGTPMIVQSMVIYYGSAQA----------FGISIDRTIAAIFIVSINTGAYMSEI 394

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR G+ AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +
Sbjct: 395 VRGGIFAVDKGQFEAATALGMTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVI 454

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +L   G TI  QT +  +   I   IY  L+  I   +  +  + 
Sbjct: 455 SVVELYFSGNTIATQTYKYFQTFTIIAVIYFVLTFTITRILRYVEHRF 502



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++ +G I   +IG L+G  R +            KL  W   VY+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTITGLLIGLLIGVFRTAPTSKNKALAILQKLFGWFLNVYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGSAQAF 369


>gi|328464919|gb|EGF36207.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus MTCC 5463]
          Length = 537

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       V  F +G+++ +  T        + +   
Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALN 346

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        L     I          +  I +S
Sbjct: 347 VVKWLLSVYVEIF--RGTPMMVQAAVIYYGIAQFWHLNLNRTI----------AALIIVS 394

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++++  
Sbjct: 395 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNEFIVN 454

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  K+
Sbjct: 455 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKKL 512



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G +    IG LVG  R               +V W+  VYV
Sbjct: 297 QYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALNVVKWLLSVYV 356

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 357 EIFRGTPMMVQAAVIYYGIAQFWH 380


>gi|295397439|ref|ZP_06807526.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294974340|gb|EFG50080.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 555

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 15/242 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
             S V        ++ L+    TM       +  FV+G++++++ + + R   +      
Sbjct: 305 FWSEVAGIWDTYGSQFLTGAGNTMFIALSSTIMGFVIGLLIAIYRSLIVRRDQKPVAYFF 364

Query: 220 PLLYISTF-----LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             L+         +  G P +V   + +           FNF           +  + +S
Sbjct: 365 YKLFDFVIAAYIEIFRGTPMMVQAMMIFYGSRLF-----FNF-----QMSTMFAALLIVS 414

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+ +V +GQ EAA A+G+ H +    ++LPQA+RSI+P L ++++  
Sbjct: 415 INTGAYLAEVIRGGITSVDKGQTEAARAIGMNHYQTMTTIVLPQAIRSILPALGNEFVIN 474

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +K++S+   +   +L  V  +    T    +  LI   IY  L+      +N +  ++A 
Sbjct: 475 IKDTSVLNVIAVTELFFVTKSAAGSTYLTFQTFLITAIIYFVLTFTTTRVLNFIENRMAG 534

Query: 395 KE 396
           K+
Sbjct: 535 KK 536



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 25/116 (21%)

Query: 49  YNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT 108
             N+ +   S G  F SE AG              +Y +  L G  NT ++A S  I   
Sbjct: 293 MVNLNERGESAG--FWSEVAGIW-----------DTYGSQFLTGAGNTMFIALSSTIMGF 339

Query: 109 IIGTLVGAGRLSAN------------KLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           +IG L+   R                KL  ++   Y+E+FR  P +V    ++   
Sbjct: 340 VIGLLIAIYRSLIVRRDQKPVAYFFYKLFDFVIAAYIEIFRGTPMMVQAMMIFYGS 395


>gi|315145819|gb|EFT89835.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 487

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 18/236 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F        L+    T+       +F  +LG +L+L      +  + K  + + 
Sbjct: 270 FQKDQRFLQKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALM-----KLANSKILRGIA 324

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI    + G P LV I + Y           F          +  +  IALS  + A+
Sbjct: 325 IAYIE--YVRGTPLLVQIFIVY-----------FGTGVLGLDLSKVAAGCIALSLNSGAY 371

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+
Sbjct: 372 VAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNEFVTVIKESSV 431

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G ++L+   G +   + +     LI   IY  L+  I+  +     +++  +
Sbjct: 432 VSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTISRLLGVAERRMSTSD 487



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G   T +LAF G++   I+G L+   +L+ +K++  I   Y+E  R  P LV 
Sbjct: 280 YGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIAIAYIEYVRGTPLLVQ 339

Query: 145 IFFLYKSV 152
           IF +Y   
Sbjct: 340 IFIVYFGT 347


>gi|227517812|ref|ZP_03947861.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229546739|ref|ZP_04435464.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229548830|ref|ZP_04437555.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|255971345|ref|ZP_05421931.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|256617763|ref|ZP_05474609.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200]
 gi|256761649|ref|ZP_05502229.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256854261|ref|ZP_05559625.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256960019|ref|ZP_05564190.1| arpJ [Enterococcus faecalis Merz96]
 gi|256964286|ref|ZP_05568457.1| arpJ [Enterococcus faecalis HIP11704]
 gi|257081138|ref|ZP_05575499.1| amino acid-binding/permease [Enterococcus faecalis E1Sol]
 gi|257083807|ref|ZP_05578168.1| amino acid ABC transporter [Enterococcus faecalis Fly1]
 gi|257089304|ref|ZP_05583665.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257415457|ref|ZP_05592451.1| arpJ [Enterococcus faecalis AR01/DG]
 gi|257421139|ref|ZP_05598129.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293383772|ref|ZP_06629679.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|293388752|ref|ZP_06633245.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|300860123|ref|ZP_07106211.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307271893|ref|ZP_07553161.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307275311|ref|ZP_07556454.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307290910|ref|ZP_07570800.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312901565|ref|ZP_07760838.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312904453|ref|ZP_07763612.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312907012|ref|ZP_07766008.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312952839|ref|ZP_07771701.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|312978730|ref|ZP_07790457.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|227074736|gb|EEI12699.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|229306059|gb|EEN72055.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229308088|gb|EEN74075.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|255962363|gb|EET94839.1| amino acid ABC transporter [Enterococcus faecalis T1]
 gi|256597290|gb|EEU16466.1| amino acid ABC transporter [Enterococcus faecalis ATCC 4200]
 gi|256682900|gb|EEU22595.1| amino acid ABC transporter [Enterococcus faecalis T3]
 gi|256709821|gb|EEU24865.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256950515|gb|EEU67147.1| arpJ [Enterococcus faecalis Merz96]
 gi|256954782|gb|EEU71414.1| arpJ [Enterococcus faecalis HIP11704]
 gi|256989168|gb|EEU76470.1| amino acid-binding/permease [Enterococcus faecalis E1Sol]
 gi|256991837|gb|EEU79139.1| amino acid ABC transporter [Enterococcus faecalis Fly1]
 gi|256998116|gb|EEU84636.1| ABC amino acid transporter [Enterococcus faecalis CH188]
 gi|257157285|gb|EEU87245.1| arpJ [Enterococcus faecalis ARO1/DG]
 gi|257162963|gb|EEU92923.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291078848|gb|EFE16212.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis R712]
 gi|291081909|gb|EFE18872.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis S613]
 gi|295113911|emb|CBL32548.1| amino acid ABC transporter substrate-binding protein, PAAT family
           (TC 3.A.1.3.-)/amino acid ABC transporter membrane
           protein, PAAT family (TC 3.A.1.3.-) [Enterococcus sp.
           7L76]
 gi|300850941|gb|EFK78690.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306497980|gb|EFM67507.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306507945|gb|EFM77072.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511399|gb|EFM80401.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|310626997|gb|EFQ10280.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310629355|gb|EFQ12638.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310632151|gb|EFQ15434.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311288437|gb|EFQ66993.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311291360|gb|EFQ69916.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315029764|gb|EFT41696.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315148051|gb|EFT92067.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315149654|gb|EFT93670.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315152966|gb|EFT96982.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315155197|gb|EFT99213.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315157525|gb|EFU01542.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315163047|gb|EFU07064.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315171996|gb|EFU16013.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315174863|gb|EFU18880.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315577324|gb|EFU89515.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|327534474|gb|AEA93308.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 487

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 18/236 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F        L+    T+       +F  +LG +L+L      +  + K  + + 
Sbjct: 270 FQKDQSFLQKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALM-----KLANSKILRGIA 324

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI    + G P LV I + Y           F          +  +  IALS  + A+
Sbjct: 325 IAYIE--YVRGTPLLVQIFIVY-----------FGTGVLGLDLSKVAAGCIALSLNSGAY 371

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+
Sbjct: 372 VAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNEFVTVIKESSV 431

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G ++L+   G +   + +     LI   IY  L+  I+  +     +++  +
Sbjct: 432 VSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTISRLLGVAERRMSTSD 487



 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ DQ  +       Y    L G   T +LAF G++   I+G L+   +L+ +K++  I 
Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
             Y+E  R  P LV IF +Y   
Sbjct: 325 IAYIEYVRGTPLLVQIFIVYFGT 347


>gi|227510040|ref|ZP_03940089.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227512970|ref|ZP_03943019.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227083727|gb|EEI19039.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227190419|gb|EEI70486.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 716

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 17/219 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS    TM        F+ + GIV+ L      + F+  +        I  +L  G+P L
Sbjct: 515 LSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSS-------ILIYLFRGMPLL 567

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL    Y      P L            P F++  + L+    A+IA  V+ G+ AV  G
Sbjct: 568 VLALFIYT---GIPSLTG-------EKIPAFVAGVVTLTFNEGAYIAAFVKGGIQAVDPG 617

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL   K+ R V+LPQ +R +IP   +Q++  LK++S+   +G  +L   G  
Sbjct: 618 QMEAARSLGLPFGKSMRKVILPQGIRIMIPSFINQFIITLKDTSILSIIGLLELTQTGKI 677

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           II +  +  ++  I   +YL +  ++    N +  +  +
Sbjct: 678 IIARNLEGFKVWTIVALMYLIIITLLTWLSNWVQRRTKV 716



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 37/77 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T WL    +  ATI G +VG   +   K   W+  + + +FR +P LV+  F
Sbjct: 513 ALLSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALF 572

Query: 148 LYKSVLSVLPIPDHSIV 164
           +Y  + S+      + V
Sbjct: 573 IYTGIPSLTGEKIPAFV 589


>gi|260102128|ref|ZP_05752365.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           helveticus DSM 20075]
 gi|260084018|gb|EEW68138.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, membrane protein [Lactobacillus
           helveticus DSM 20075]
          Length = 546

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       V  F +G+++ +  T        + +   
Sbjct: 296 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALN 355

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        L     I          +  I +S
Sbjct: 356 VVKWLLSVYVEIF--RGTPMMVQAAVIYYGIAQFWHLNLNRTI----------AALIIVS 403

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++++  
Sbjct: 404 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNEFIVN 463

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  K+
Sbjct: 464 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKKL 521



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G +    IG LVG  R               +V W+  VYV
Sbjct: 306 QYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALNVVKWLLSVYV 365

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 366 EIFRGTPMMVQAAVIYYGIAQFWH 389


>gi|227550833|ref|ZP_03980882.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|293379248|ref|ZP_06625394.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|293573051|ref|ZP_06683992.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E980]
 gi|227180028|gb|EEI61000.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|291606870|gb|EFF36251.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecium E980]
 gi|292642044|gb|EFF60208.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 530

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 19/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPL 221
                N  L    LT+       V    LG+++ +F         L+R F  K G AL  
Sbjct: 294 WKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQ-KIGNALLS 352

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F   G P +V   + +                G +++    +L+I +S  T A++
Sbjct: 353 IYVEIF--RGTPMMVQAMVIFY---------GLALAFGISLNRTIAALFI-VSLNTGAYM 400

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++ 
Sbjct: 401 TEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVL 460

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 461 SVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 511



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              K+   +  +YV
Sbjct: 296 QYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNALLSIYV 355

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           E+FR  P +V    ++  +    
Sbjct: 356 EIFRGTPMMVQAMVIFYGLALAF 378


>gi|29375478|ref|NP_814632.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227555005|ref|ZP_03985052.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|255973964|ref|ZP_05424550.1| amino acid ABC transporter [Enterococcus faecalis T2]
 gi|257086232|ref|ZP_05580593.1| amino acid ABC transporter [Enterococcus faecalis D6]
 gi|257418488|ref|ZP_05595482.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|307278411|ref|ZP_07559486.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307286701|ref|ZP_07566787.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|29342938|gb|AAO80702.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Enterococcus faecalis V583]
 gi|227175864|gb|EEI56836.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|255966836|gb|EET97458.1| amino acid ABC transporter [Enterococcus faecalis T2]
 gi|256994262|gb|EEU81564.1| amino acid ABC transporter [Enterococcus faecalis D6]
 gi|257160316|gb|EEU90276.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|306502179|gb|EFM71463.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504917|gb|EFM74112.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|315027079|gb|EFT39011.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315165246|gb|EFU09263.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315167972|gb|EFU11989.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315574194|gb|EFU86385.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315581663|gb|EFU93854.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
          Length = 487

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 18/236 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F        L+    T+       +F  +LG +L+L      +  + K  + + 
Sbjct: 270 FQKDQSFLQKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALM-----KLANSKILRGIA 324

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI    + G P LV I + Y           F          +  +  IALS  + A+
Sbjct: 325 IAYIE--YVRGTPLLVQIFIVY-----------FGTGVLGLDLSKVAAGCIALSLNSGAY 371

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+
Sbjct: 372 VAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNEFVTVIKESSV 431

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G ++L+   G +   + +     LI   IY  L+  I+  +     +++  +
Sbjct: 432 VSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTISRLLGVAERRMSTSD 487



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ DQ  +       Y    L G   T +LAF G++   I+G L+   +L+ +K++  I 
Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
             Y+E  R  P LV IF +Y   
Sbjct: 325 IAYIEYVRGTPLLVQIFIVYFGT 347


>gi|256396803|ref|YP_003118367.1| polar amino acid ABC transporter inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
 gi|256363029|gb|ACU76526.1| polar amino acid ABC transporter, inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
          Length = 333

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 11/264 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +    L   ++    +   +    + +             +    ++ V++ ++GIV  +
Sbjct: 41  IAAAVLLVLLVMFGHMLVFNKNFGWDLVKQWLFWHTIVQAVLVTLELTVYAMLIGIVGGV 100

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--------HFDKPVLGQF 254
               + R        +    Y   F   G P LV +     +         F  P   +F
Sbjct: 101 LL-AVMRLSSNPVSSSAAWAYTWFF--RGTPVLVQLLFWNNIAALVGQEVGFGIPFGPEF 157

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +  ++    F +  +AL    AA+++EIVR+G+++V  GQ EAA +LG+   K  R +
Sbjct: 158 FHLDTNSTITRFTAAVLALGLNEAAYMSEIVRAGILSVDEGQSEAAASLGMRRAKIMRRI 217

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQAMR IIPP  ++ +++LK SSLA  +G  +L     + I+   +AI   ++    Y
Sbjct: 218 VLPQAMRVIIPPTGNETISMLKTSSLASVIGVVELTDASESAIHLYFKAIPFYVVASLWY 277

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L  + ++++    +  + A    +
Sbjct: 278 LFFTTVLSIGQYYIERRYARGSSR 301



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 38/115 (33%), Gaps = 6/115 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   I+   + T  L    M+   + G L+   RLS+N + +     Y   FR  P 
Sbjct: 70  QWLFWHTIVQAVLVTLELTVYAMLIGIVGGVLLAVMRLSSNPVSSSAAWAYTWFFRGTPV 129

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           LV + F       V         + FG+          T +  T     V +  L
Sbjct: 130 LVQLLFWNNIAALV------GQEVGFGIPFGPEFFHLDTNSTITRFTAAVLALGL 178


>gi|284048020|ref|YP_003398359.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
 gi|283952241|gb|ADB47044.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
          Length = 218

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 13/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I   S  LG+ + +    L R    +  + L  +Y++   + G P LV I L Y   F
Sbjct: 21  VEITAASVGLGLAIGVVV-SLIRLCGIRALRVLGDIYVTF--LRGTPLLVQIFLVY---F 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L              +++   A S  + A++AEI R G+ ++ +GQMEA  +LG+T
Sbjct: 75  ALPALI-------HHRVDAYVAAISACSINSGAYVAEIFRGGIESIDKGQMEAGRSLGMT 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++LPQA + IIPPL ++++ +LK+SSL   +GF +L   G  II +T  + EI
Sbjct: 128 WWQTMRHIILPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIARTYASFEI 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L    IYL ++  +A  +  L  +    E+
Sbjct: 188 WLSVAIIYLVMTFAVARLVGVLERRYKKDEQ 218



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 34/76 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +  + +     IG +V   RL   + +  +  +YV   R  P LV IF +
Sbjct: 13  LLAGAGITVEITAASVGLGLAIGVVVSLIRLCGIRALRVLGDIYVTFLRGTPLLVQIFLV 72

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++ +++     + V
Sbjct: 73  YFALPALIHHRVDAYV 88


>gi|328958164|ref|YP_004375550.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4]
 gi|328674488|gb|AEB30534.1| high affinity arginine ABC transporter [Carnobacterium sp. 17-4]
          Length = 473

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 17/207 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                F  + + G++L LF    ++           L +I+T  +  L  + LI L + +
Sbjct: 280 LTIISFAIATIFGVILGLFNASPNKV----------LNWIATIYVDILRGIPLIVLAFFI 329

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P          S   P +++  I LS  T A+IAE+VR G+ AV  GQ+EA+ +LG
Sbjct: 330 YFSIPQF-------LSIQIPAYIAGVITLSLNTTAYIAELVRGGIQAVDTGQLEASRSLG 382

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT+  + R V+LPQA++ +IP   +Q++  LK++S+   +G  +L   G  II +T  + 
Sbjct: 383 LTYNTSMRKVVLPQAVKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSG 442

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++ LI   +Y+ +  ++  F N +  +
Sbjct: 443 DMWLIVGLMYIIIITILTKFSNYIERR 469



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 2/114 (1%)

Query: 44  CVNNVYNNMEKSNLSLGI--GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAF 101
             NN   N+  +     I   +L + +       +  +         +L G   T  L  
Sbjct: 223 MFNNGLINIRANGTYDEIMDTYLGDTSTKNDSANLGFFGLIQQNGGELLKGLGRTLLLTI 282

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
                ATI G ++G    S NK++ WI  +YV++ R IP +V+ FF+Y S+   
Sbjct: 283 ISFAIATIFGVILGLFNASPNKVLNWIATIYVDILRGIPLIVLAFFIYFSIPQF 336


>gi|256957248|ref|ZP_05561419.1| amino acid ABC transporter [Enterococcus faecalis DS5]
 gi|257077778|ref|ZP_05572139.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           faecalis JH1]
 gi|294781304|ref|ZP_06746650.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|307267969|ref|ZP_07549357.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|256947744|gb|EEU64376.1| amino acid ABC transporter [Enterococcus faecalis DS5]
 gi|256985808|gb|EEU73110.1| his/Glu/Gln/Arg/opine ABC transporter permease [Enterococcus
           faecalis JH1]
 gi|294451640|gb|EFG20096.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|306515610|gb|EFM84137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|315032477|gb|EFT44409.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034288|gb|EFT46220.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|323480074|gb|ADX79513.1| his/Glu/Gln/Arg/opine amino ABC transporter [Enterococcus faecalis
           62]
          Length = 487

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 18/236 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F        L+    T+       +F  +LG +L+L      +  + K  + + 
Sbjct: 270 FQKDQSFLQKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALM-----KLANSKILRGIA 324

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI    + G P LV I + Y           F          +  +  IALS  + A+
Sbjct: 325 IAYIE--YVRGTPLLVQIFIVY-----------FGTGVLGLDLSKVAAGCIALSLNSGAY 371

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+
Sbjct: 372 VAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNEFVTVIKESSV 431

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G ++L+   G +   + +     LI   IY  L+  I+  +     +++  +
Sbjct: 432 VSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTISRLLGVAERRMSTSD 487



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ DQ  +       Y    L G   T +LAF G++   I+G L+   +L+ +K++  I 
Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
             Y+E  R  P LV IF +Y   
Sbjct: 325 IAYIEYVRGTPLLVQIFIVYFGT 347


>gi|312863976|ref|ZP_07724212.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|311100389|gb|EFQ58596.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
          Length = 515

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 17/225 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKAL-----PLLYISTF 227
                         I +   V+G  + L     R +     K    L      +L +   
Sbjct: 290 NWPQFLRGTGITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIE 349

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V   + Y   +        N           ++    +S  T A+++EIVR 
Sbjct: 350 VFRGTPMIVQSMVIY---YGTAQAFGINIDRT-------LAAVFIVSINTGAYMSEIVRG 399

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   
Sbjct: 400 GIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVV 459

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   G T+ +QT Q  +   +   IY  L+  +   +  +  ++
Sbjct: 460 ELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRL 504



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G +  T IG ++G  R +            KL  W+  VY+EV
Sbjct: 291 WPQFLRGTGITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEV 350

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 351 FRGTPMIVQSMVIYYGTAQAF 371


>gi|326692574|ref|ZP_08229579.1| amino acid ABC transporter [Leuconostoc argentinum KCTC 3773]
          Length = 491

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 18/231 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F     N  +    +T+   A   +   VLG +L+LF     +       + +  +Y+  
Sbjct: 279 FWAKYGNLFVKGTLITLALAAVAVIIGVVLGTILALF-----KLSPNFILRVIGNVYVE- 332

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV   + +           F           F +  +A+   +AA++AEI+R
Sbjct: 333 -YVRGTPLLVQAFMVF-----------FGTQVIGLNLSAFAAGSLAMGLNSAAYVAEIIR 380

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQ EAA +LGL+ RK  R ++LPQA+++I+P L ++++ ++K  S+   +G 
Sbjct: 381 SGINSVDGGQTEAARSLGLSKRKTMRFIVLPQAVKNILPALGNEFVTVIKEGSVVSVIGV 440

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L+   G +   + +    +LI  FIY  L+  I+  +     ++A   +
Sbjct: 441 GELMFQTGVVQGASFKPFFPLLIASFIYFVLTFTISRALGYAEKRMARTSR 491



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA   +I   ++GT++   +LS N ++  I  VYVE  R  P LV 
Sbjct: 283 YGNLFVKGTLITLALAAVAVIIGVVLGTILALFKLSPNFILRVIGNVYVEYVRGTPLLVQ 342

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 343 AFMVFFGT 350


>gi|295398457|ref|ZP_06808496.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
 gi|294973321|gb|EFG49109.1| amino acid ABC superfamily ATP binding cassette transporter
           [Aerococcus viridans ATCC 11563]
          Length = 506

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 19/246 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
            L    L                      ++    T+  +A    F  ++G  L+L    
Sbjct: 274 GLIDQWLEESYQIIEDNRQSTWAAYAPYFVNGLKTTLVISATAIFFGLIIGAALALM--- 330

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    K    +   YI   ++ G P ++ +   Y L F            G       
Sbjct: 331 --RLSENKLVDLIAQAYIE--VVRGTPLMIQVLFVY-LGFA-----------GMFGWSTM 374

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S  +A+S  + A+IAEI+R G+ +V +GQ EAA +LGL +    R V+ PQ++RSI P 
Sbjct: 375 TSGLVAVSLNSGAYIAEIIRGGISSVDKGQAEAARSLGLGYWTTMRKVIFPQSLRSIWPS 434

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +++++L+K SS+   +G A+L      +   T   I  ++I M IY  L+  +   +N
Sbjct: 435 LGNEFVSLIKESSIVSTIGVAELTFQTRNVSTITFNGIIPLIISMAIYFMLTFTLTKLLN 494

Query: 387 RLNAKI 392
               ++
Sbjct: 495 VYERRM 500



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 35/74 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T  ++ + +    IIG  +   RLS NKLV  I + Y+EV R  P ++ 
Sbjct: 298 YAPYFVNGLKTTLVISATAIFFGLIIGAALALMRLSENKLVDLIAQAYIEVVRGTPLMIQ 357

Query: 145 IFFLYKSVLSVLPI 158
           + F+Y     +   
Sbjct: 358 VLFVYLGFAGMFGW 371


>gi|257878816|ref|ZP_05658469.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257881454|ref|ZP_05661107.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257885725|ref|ZP_05665378.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257890675|ref|ZP_05670328.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260558382|ref|ZP_05830578.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207089|ref|ZP_05921778.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|257813044|gb|EEV41802.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257817112|gb|EEV44440.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257821581|gb|EEV48711.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257827035|gb|EEV53661.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|260075556|gb|EEW63862.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078717|gb|EEW66419.1| amino acid ABC transporter [Enterococcus faecium TC 6]
          Length = 526

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 19/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPL 221
                N  L    LT+       V    LG+++ +F         L+R F  K G AL  
Sbjct: 290 WKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQ-KIGNALLS 348

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F   G P +V   + +                G +++    +L+I +S  T A++
Sbjct: 349 IYVEVF--RGTPMMVQAMVIFY---------GLALAFGISLNRTIAALFI-VSLNTGAYM 396

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++ 
Sbjct: 397 TEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVL 456

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 457 SVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              K+   +  +YV
Sbjct: 292 QYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNALLSIYV 351

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           EVFR  P +V    ++  +    
Sbjct: 352 EVFRGTPMMVQAMVIFYGLALAF 374


>gi|218191223|gb|EEC73650.1| hypothetical protein OsI_08176 [Oryza sativa Indica Group]
          Length = 449

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/205 (25%), Positives = 104/205 (50%), Gaps = 16/205 (7%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +   ++G+V        +R +       + L++I   +I G P +V +   Y   F  P
Sbjct: 260 LIGGLIIGLVAGF-----ARTYGGWIANHIALVFIE--VIRGTPIVVQVMFIY---FALP 309

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +               F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R+
Sbjct: 310 MAFT------DLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSRRE 363

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V++P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI   
Sbjct: 364 TIRYVIMPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSA 423

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
              IYL ++++++  + RL  ++ +
Sbjct: 424 VAVIYLIITLVLSFVLRRLERRMKI 448


>gi|295839709|ref|ZP_06826642.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces sp. SPB74]
 gi|197700002|gb|EDY46935.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces sp. SPB74]
          Length = 340

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 14/252 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           S+         +    F  +  L    LT+   A + V  FVLG +L+L      R    
Sbjct: 95  SLARNKAFQWDVVADYFTTSAVLRGLGLTLWLTALVMVLGFVLGTLLAL-----GRMSAN 149

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKPVLGQFNFIGGSTVSPEF 266
                +   YI  F     P LV +   +        L    P   +F  +    +    
Sbjct: 150 PVLSWVSSGYIWFF--RSTPILVQLLFWFNIGALYPRLGLGIPFGPEFVTVKTVNLLGPV 207

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               + L+ + AA+ AE+VR GL++V RGQ+EAA +LGL+  +  R ++LPQAMR+I+PP
Sbjct: 208 TVAVLGLTLHEAAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWRRLRRIVLPQAMRAIVPP 267

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  +  LK +S+   +   DL+     + ++T Q I ++L+    Y  ++ ++++  +
Sbjct: 268 AGNMLIGALKGTSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLVATIWYALVTSVLSVGQH 327

Query: 387 RLNAKIALKEKK 398
            +    A   ++
Sbjct: 328 YVEKHYARGAER 339



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T WL    M+   ++GTL+  GR+SAN +++W+   Y+  FR+ P LV + F
Sbjct: 115 AVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSANPVLSWVSSGYIWFFRSTPILVQLLF 174

Query: 148 LYKSV 152
            +   
Sbjct: 175 WFNIG 179


>gi|256829242|ref|YP_003157970.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578418|gb|ACU89554.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 268

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 107/227 (47%), Gaps = 12/227 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              R L F    +    ++ + S +L +VL L    L R    K    +   Y+   +I 
Sbjct: 53  PYWRILQFLPDGVVVTFQVTILSIMLSLVLGLITG-LGRLSRNKVLNLIASTYVE--VIR 109

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV +   Y              +      P   +   A+     A++ E+ R+G+ 
Sbjct: 110 GIPLLVQLFYIYY---------ALGRLEFFKDLPPMAAAVTAMGICYGAYMGEVFRAGID 160

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EAA +LG +  +    V+LPQA R+I+PP+ ++++ LLK+SSL   +  +DL+
Sbjct: 161 SIDKGQAEAARSLGFSRAQTMMYVILPQAWRTILPPVGNEFIALLKDSSLVSILAVSDLL 220

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G    +++    E   +   +YL +++ ++  ++++  ++   E+
Sbjct: 221 RRGREFASESFMYFEAYTMVALVYLVITLFLSKAVSKMEQRLNYYER 267



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 40/79 (50%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                    +  G V TF +    ++ + ++G + G GRLS NK++  I   YVEV R I
Sbjct: 52  EPYWRILQFLPDGVVVTFQVTILSIMLSLVLGLITGLGRLSRNKVLNLIASTYVEVIRGI 111

Query: 140 PPLVVIFFLYKSVLSVLPI 158
           P LV +F++Y ++  +   
Sbjct: 112 PLLVQLFYIYYALGRLEFF 130


>gi|330878513|gb|EGH12662.1| putative ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 506

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 14/240 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   FG+F +          +  +   +V S VLG +L+L     ++         
Sbjct: 1   MTFDWKYMFGLFSDTEFWMATWTVIQLSVLTWVISIVLGFILAL-----AKQSSVPLINL 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               YI  F    LP LVL+   Y L    P          + ++  F +  IA+     
Sbjct: 56  PAKAYIWLF--RSLPLLVLLIFVYNLPQAFPA-------TSAVLANPFWAGLIAMVMCET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R GL+++ +GQ EAA ALGL        +++PQA+R  +P LT++Y++++K S
Sbjct: 107 AYVAEIHRGGLLSIAKGQTEAARALGLRFVGTQWRIVIPQALRVALPSLTNEYISIVKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + ++K
Sbjct: 167 SLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVLVVTVFDFLLKRLERHLDVTQRK 226



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 11/196 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             +       L+    + + ++G ++   + S+  L+    + Y+ +FR++P LV++ F+
Sbjct: 17  FWMATWTVIQLSVLTWVISIVLGFILALAKQSSVPLINLPAKAYIWLFRSLPLLVLLIFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVL 200
           Y  +    P     +  PF   L    +       + +    +         +  LG+  
Sbjct: 77  YN-LPQAFPATSAVLANPFWAGLIAMVMCETAYVAEIHRGGLLSIAKGQTEAARALGLRF 135

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
                R+      +   ALP L      I  L +LV +    ++      L   NF+   
Sbjct: 136 VGTQWRIVIPQALRV--ALPSLTNEYISIVKLSSLVSVISLTEILMVGQRLYSQNFLVME 193

Query: 261 TVSPEFMSLYIALSCY 276
           T++       + ++ +
Sbjct: 194 TMAAVAFYYVLVVTVF 209


>gi|154487057|ref|ZP_02028464.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis
           L2-32]
 gi|154084920|gb|EDN83965.1| hypothetical protein BIFADO_00895 [Bifidobacterium adolescentis
           L2-32]
          Length = 516

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + SF + +VL + A  L +    K    L  +YI+ F   G P LV     +  +F
Sbjct: 322 LLITLLSFAIALVLGV-AFGLMKVSESKIAAGLANVYIAVF--RGTPILVW---AFFFYF 375

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L     IG S     +++  + LS  + A++AEIVR  + +V  GQME A +LGL 
Sbjct: 376 GVPQL-----IGHSVNI--WVAGALTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGLN 428

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           HR+A R V+LPQA +  +P + +Q + ++K+SSL +A+GF +L+     +     +  E 
Sbjct: 429 HRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQLYAANFRVTET 488

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +LI   +Y     ++    N ++ K+  
Sbjct: 489 LLIVGVMYFVAITILTWLANIVDRKVNR 516



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 37/77 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +       A ++G   G  ++S +K+ A +  VY+ VFR  P LV  FF
Sbjct: 313 ALLTGLRNTLLITLLSFAIALVLGVAFGLMKVSESKIAAGLANVYIAVFRGTPILVWAFF 372

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  V  ++    +  V
Sbjct: 373 FYFGVPQLIGHSVNIWV 389


>gi|270293390|ref|ZP_06199599.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M143]
 gi|270278239|gb|EFA24087.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M143]
          Length = 520

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLLYIST 226
             + L    +T+  +    +   ++G+ + +F T       + +  +K    +  +YI  
Sbjct: 289 WQQLLRGAGITLLISIIGTIAGLIIGLAIGVFRTAPLSENKAIYGLQKLLGWILNVYIEI 348

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V   + Y   +        N           ++    +S  T A++ EIVR
Sbjct: 349 F--RGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVR 396

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G++AV +GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++  +K++S+   +  
Sbjct: 397 GGILAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISV 456

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 457 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 502



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KL+ WI  VY
Sbjct: 286 SENWQQLLRGAGITLLISIIGTIAGLIIGLAIGVFRTAPLSENKAIYGLQKLLGWILNVY 345

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 346 IEIFRGTPMIVQSMVIYYGTAQAF 369


>gi|262038365|ref|ZP_06011742.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Leptotrichia goodfellowii F0264]
 gi|261747583|gb|EEY35045.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Leptotrichia goodfellowii F0264]
          Length = 523

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 100/237 (42%), Gaps = 19/237 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF-------ATRLSRHFHEKT 215
            VL F        L     T+  +    V  F++G+ + L         T   +    K 
Sbjct: 279 WVLFFLKNNKKAFLIGTATTLGISLTGTVVGFIIGLGVMLVKNINTDERTSAVKKIGLKI 338

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
              +  +YI+ F   G P +V   + +                 +       +    +S 
Sbjct: 339 INMIFSIYIAVF--RGTPMIVQSMIIFYGSSQV----------LNWNLSPLGAALFIVSI 386

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++ EI+R G+ ++ +GQ EAA A+G+TH +  + ++ PQ  R I+P + ++++  +
Sbjct: 387 NTGAYMCEIIRGGIDSIDKGQFEAAQAIGMTHFQMMKNIIFPQVFRIILPSIGNEFIINI 446

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++S+   +   +L  V  ++     +  E+ +I   IY  L+  ++  +  +  K+
Sbjct: 447 KDTSVLSVISVTELFFVSKSVAGTYSKYYEVFIITCVIYFFLTFTLSALLKYVEKKM 503



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 20/88 (22%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAG-----------RLS-----ANKLVAWICR 130
            A L+G   T  ++ +G    T++G ++G G           R S       K++  I  
Sbjct: 289 KAFLIGTATTLGISLTG----TVVGFIIGLGVMLVKNINTDERTSAVKKIGLKIINMIFS 344

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +Y+ VFR  P +V    ++     VL  
Sbjct: 345 IYIAVFRGTPMIVQSMIIFYGSSQVLNW 372


>gi|115358739|ref|YP_775877.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115284027|gb|ABI89543.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 500

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   F +  +        + ++ +   ++   +LG  ++L     +R  H    K 
Sbjct: 1   MQFDWHYAFQLLWDKDFWRACVVVVELSVVAWLLGVLLGFPVAL-----ARQSHRPLLKR 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    LP LVL+   Y L    P          + +S  F +  IA+     
Sbjct: 56  AAAVYIWFF--RSLPLLVLLVFIYNLPQVFPA-------TSAVLSDPFTAGLIAMVLSET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R G+++VPRGQ+EA  ALG+      RL+++PQA+R  +P L ++++ ++K +
Sbjct: 107 AYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQRLIVMPQAIRIALPALANEFITIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q     E +L   F Y+ +  + +  +  L   + +  +
Sbjct: 167 SLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLLGYLERHLDVSRR 225



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 12/182 (6%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
             +   ++G  V   R S   L+     VY+  FR++P LV++ F+Y  +  V P     
Sbjct: 31  AWLLGVLLGFPVALARQSHRPLLKRAAAVYIWFFRSLPLLVLLVFIYN-LPQVFPATSAV 89

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVLSLFATRLSRHFHEK 214
           +  PF   L    LS      + +    +            LGI  +     +      +
Sbjct: 90  LSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQRLIVMPQAIR 149

Query: 215 TGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              ALP L      I  L +LV +I+L   L   + +  Q   +  + ++  F  + I  
Sbjct: 150 I--ALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVT 207

Query: 274 SC 275
             
Sbjct: 208 VF 209


>gi|167628827|ref|YP_001679326.1| glutamine abc transporter, permease protein [Heliobacterium
           modesticaldum Ice1]
 gi|167591567|gb|ABZ83315.1| glutamine abc transporter, permease protein [Heliobacterium
           modesticaldum Ice1]
          Length = 221

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/215 (31%), Positives = 118/215 (54%), Gaps = 13/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T  K+   S ++G V+ LF   L+R  H +  + +  +Y    +I G P LV I +   
Sbjct: 20  WTTVKVTAISVMIGTVIGLFI-ALARLSHWRLLRWVAAIYTD--VIRGTPLLVQIFI--- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +H   P L   +        P   S  IALS  + A++AEI R+G+ ++ +GQMEA+ +L
Sbjct: 74  VHLGAPKLIGQSL-------PAMTSGLIALSVNSGAYVAEIFRAGIQSIDKGQMEASRSL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ +A R V+LPQA R +IPPL ++++ +LK+SSL   +   +L   G T++  T + 
Sbjct: 127 GMSYGQAMRFVILPQAFRRVIPPLGNEFIAMLKDSSLVSVISLPELTMAGRTVLGSTARV 186

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E  L    IYL+L+++ +  +     K+++K  +
Sbjct: 187 WEAWLPVAAIYLTLTLLFSRLVAWYEQKLSVKSHR 221



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 36/76 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             YA   L+G   T  +    ++  T+IG  +   RLS  +L+ W+  +Y +V R  P L
Sbjct: 9   QDYADLFLMGGWTTVKVTAISVMIGTVIGLFIALARLSHWRLLRWVAAIYTDVIRGTPLL 68

Query: 143 VVIFFLYKSVLSVLPI 158
           V IF ++     ++  
Sbjct: 69  VQIFIVHLGAPKLIGQ 84


>gi|329577884|gb|EGG59305.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 487

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 110/236 (46%), Gaps = 18/236 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F        L+    T+       +F  +LG +L+L      +  + K  + + 
Sbjct: 270 FQKDQSFLQKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALM-----KLANSKILRGIA 324

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI    + G P LV I + Y           F          +  +  IALS  + A+
Sbjct: 325 IAYIE--YVRGTPLLVQIFIVY-----------FGTGVLGLDLSKVAAGCIALSLNSGAY 371

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+
Sbjct: 372 VAEIIRAGIQAVNKGQLEAARSLGMNQNQAMRYIIFPQAIKNILPALGNEFVTVIKESSV 431

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G ++L+   G +   + +     LI   IY  L+  I+  +     +++  +
Sbjct: 432 VSVIGVSELIFQAGNVQGASFKPFLPYLIVSLIYFVLTFTISRLLGVAERRMSTSD 487



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ DQ  +       Y    L G   T +LAF G++   I+G L+   +L+ +K++  I 
Sbjct: 270 FQKDQSFL-----QKYGKFYLNGAGYTIFLAFIGVLFGAILGALLALMKLANSKILRGIA 324

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
             Y+E  R  P LV IF +Y   
Sbjct: 325 IAYIEYVRGTPLLVQIFIVYFGT 347


>gi|306828881|ref|ZP_07462073.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304429059|gb|EFM32147.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 520

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLLYIST 226
             + L    +T+  +    V   ++G+ + +F T       + +  +K    +  +YI  
Sbjct: 289 WQQLLRGAGITLLISIIGTVTGLIIGLAIGVFRTAPLSENKAIYGLQKLLGWILNVYIEI 348

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V   + Y   +        N           ++    +S  T A++ EIVR
Sbjct: 349 F--RGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVR 396

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G++AV +GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++  +K++S+   +  
Sbjct: 397 GGILAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISV 456

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 457 VELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 502



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G +   IIG  +G  R +            KL+ WI  VY
Sbjct: 286 SENWQQLLRGAGITLLISIIGTVTGLIIGLAIGVFRTAPLSENKAIYGLQKLLGWILNVY 345

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 346 IEIFRGTPMIVQSMVIYYGTAQAF 369


>gi|257887913|ref|ZP_05667566.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257893286|ref|ZP_05672939.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257896470|ref|ZP_05676123.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257823967|gb|EEV50899.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257829665|gb|EEV56272.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257833035|gb|EEV59456.1| amino acid ABC transporter [Enterococcus faecium Com12]
          Length = 526

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 19/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPL 221
                N  L    LT+       V    LG+++ +F         L+R F  K G AL  
Sbjct: 290 WKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQ-KIGNALLS 348

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F   G P +V   + +                G +++    +L+I +S  T A++
Sbjct: 349 IYVEIF--RGTPMMVQAMVIFY---------GLALAFGISLNRTIAALFI-VSLNTGAYM 396

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++ 
Sbjct: 397 TEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVL 456

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 457 SVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              K+   +  +YV
Sbjct: 292 QYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNALLSIYV 351

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           E+FR  P +V    ++  +    
Sbjct: 352 EIFRGTPMMVQAMVIFYGLALAF 374


>gi|257899437|ref|ZP_05679090.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|257837349|gb|EEV62423.1| amino acid ABC transporter [Enterococcus faecium Com15]
          Length = 526

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 19/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPL 221
                N  L    LT+       V    LG+++ +F         L+R F  K G AL  
Sbjct: 290 WKQYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQ-KIGNALLS 348

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+  F   G P +V   + +                G +++    +L+I +S  T A++
Sbjct: 349 IYVEIF--RGTPMMVQAMVIFY---------GLALAFGISLNRTIAALFI-VSLNTGAYM 396

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G+ AV  GQ EAA A+G+TH +  R V++PQ +R+I+P   ++++  +K++++ 
Sbjct: 397 TEIVRGGIFAVDEGQFEAAQAIGMTHGQTMRKVVIPQVLRNILPATGNEFVINIKDTAVL 456

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G ADL   G +      Q  +   I   IYL ++  I   +  +  KI
Sbjct: 457 SVIGVADLFFQGNSASGANFQFFQTFTIVGIIYLVMTFTITRILRAVEKKI 507



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYV 133
            Y    L G   T ++A  G +  T +G L+G  R              K+   +  +YV
Sbjct: 292 QYGNMFLRGAGLTLFIALIGTVVGTTLGLLIGVFRSVPESGNALTRFFQKIGNALLSIYV 351

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           E+FR  P +V    ++  +    
Sbjct: 352 EIFRGTPMMVQAMVIFYGLALAF 374


>gi|239982244|ref|ZP_04704768.1| permease [Streptomyces albus J1074]
          Length = 315

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 9/258 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++      SV+      D +       F N+R LS    T+       V   V G++L++
Sbjct: 40  LIALAALGSVVYAFSQGDINWAFIPDYFFNDRILSGVRETLILTVLSMVIGVVGGVLLAV 99

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGS 260
                 R        ++   YI  F   G P LV + + + L F  +   LG F     S
Sbjct: 100 M-----RLSKNPVVSSIAWFYIWFF--RGTPVLVQLFVWFNLGFVFEYMNLGPFYKDEWS 152

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F++  + L    AA++AEI R+GL++V  GQ EAA ALG++  K  R ++LPQAM
Sbjct: 153 DFMTPFLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEAAHALGMSQGKTLRRIVLPQAM 212

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R I+PP  ++ +N+LK +SL  AV + +L      I   +G  +E + +    YL L+ +
Sbjct: 213 RVIVPPTGNEVINMLKTTSLVAAVQYYELFKHAQDIGMTSGATVEALFLAATWYLILTSI 272

Query: 381 IALFMNRLNAKIALKEKK 398
           +++    +    A    +
Sbjct: 273 LSIGQYYIERYYARGSLR 290



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 3/106 (2%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I+   +P   D  +   IL G   T  L    M+   + G L+   RLS N +V+ I  
Sbjct: 57  DINWAFIP---DYFFNDRILSGVRETLILTVLSMVIGVVGGVLLAVMRLSKNPVVSSIAW 113

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            Y+  FR  P LV +F  +        +                 L
Sbjct: 114 FYIWFFRGTPVLVQLFVWFNLGFVFEYMNLGPFYKDEWSDFMTPFL 159


>gi|238917322|ref|YP_002930839.1| polar amino acid transport system substrate-binding protein
           [Eubacterium eligens ATCC 27750]
 gi|238872682|gb|ACR72392.1| polar amino acid transport system substrate-binding protein
           [Eubacterium eligens ATCC 27750]
          Length = 510

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 102/206 (49%), Gaps = 11/206 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             IF  + +  + L L    + R       + +  +YIS  ++ G P ++ + + +   +
Sbjct: 312 LAIFFLTLIFSMPLGLLVCEI-RKSRIGIVRWIARIYIS--IMRGTPLMLQLLVVFFGPY 368

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  + F    T +  F ++ I  +   AA+ AEI R G+ ++P+GQ EAA  LG +
Sbjct: 369 -------YLFGMKVTATYRFYAVIIGFALNYAAYFAEIYRGGIESIPKGQYEAAEVLGYS 421

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQ ++ ++PP+T++ + L+K++SLA A+ + ++ ++   +   T   + +
Sbjct: 422 KVQTFWKIIFPQMVKRVLPPVTNEVITLVKDTSLAFALAYTEMFTLAKQVAASTASIMPL 481

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             I    Y   + ++A+ M +L  ++
Sbjct: 482 F-IAGLFYYIFNFLVAMVMEKLEKRM 506



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 31/63 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  + F  +I +  +G LV   R S   +V WI R+Y+ + R  P ++ +  +
Sbjct: 304 LSSGMLATLAIFFLTLIFSMPLGLLVCEIRKSRIGIVRWIARIYISIMRGTPLMLQLLVV 363

Query: 149 YKS 151
           +  
Sbjct: 364 FFG 366


>gi|22536321|ref|NP_687172.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|25010207|ref|NP_734602.1| hypothetical protein gbs0132 [Streptococcus agalactiae NEM316]
 gi|76798972|ref|ZP_00781172.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 18RS21]
 gi|77409056|ref|ZP_00785774.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae COH1]
 gi|77411816|ref|ZP_00788151.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae CJB111]
 gi|77414941|ref|ZP_00791039.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 515]
 gi|22533144|gb|AAM99044.1|AE014197_12 amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 2603V/R]
 gi|23094559|emb|CAD45777.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76585667|gb|EAO62225.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus agalactiae 18RS21]
 gi|77159009|gb|EAO70222.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae 515]
 gi|77162151|gb|EAO73127.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae CJB111]
 gi|77172350|gb|EAO75501.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae COH1]
 gi|319744066|gb|EFV96443.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 516

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 13/222 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFLIF 230
           + L     T+  +    +    +G+++ +F T   S +  +   + L   LL I   +  
Sbjct: 291 QFLRGTATTLLISMVGTIVGLFIGLLIGVFRTAPKSDNKLKAALQKLLGWLLNIYIEVFR 350

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V   + Y                        ++    +S  T A+++EIVR G+ 
Sbjct: 351 GTPMIVQSMVIYYGTAQA----------FGVSLDRTLAAIFIVSINTGAYMSEIVRGGIF 400

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +L 
Sbjct: 401 SVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELY 460

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 461 FSGNTVATQTYQYFQTFTIIAIIYFILTFTVTRILRYIEKRF 502



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
            +  L G   T  ++  G I    IG L+G  R +            KL+ W+  +Y+EV
Sbjct: 289 GSQFLRGTATTLLISMVGTIVGLFIGLLIGVFRTAPKSDNKLKAALQKLLGWLLNIYIEV 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|169350594|ref|ZP_02867532.1| hypothetical protein CLOSPI_01363 [Clostridium spiroforme DSM 1552]
 gi|169292914|gb|EDS75047.1| hypothetical protein CLOSPI_01363 [Clostridium spiroforme DSM 1552]
          Length = 523

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 14/193 (7%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L     ++    +  +YI  F   G P +V  A  Y              +      
Sbjct: 334 RDSLISKIVKRVVWFITTVYIEIF--RGTPMMVQGAFIYY------------GLKNIVHW 379

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F +    ++  T A++AEI+RSG+ AV +GQ EAA ++G+   +    ++LPQA+++ 
Sbjct: 380 SPFTAGVFVITINTGAYMAEIIRSGIQAVDKGQSEAARSIGMNSVQTMLYIVLPQAIKNS 439

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P + ++++  +K+SS+   +   +L     ++       +    +   IYL L+     
Sbjct: 440 FPAIGNEFVINIKDSSVLNVIAVTELFYQAKSVAGSLYAFVPTYFVVALIYLCLTFPTTR 499

Query: 384 FMNRLNAKIALKE 396
            +N +  ++  K+
Sbjct: 500 ILNYIEKRMNRKK 512


>gi|172063474|ref|YP_001811125.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171995991|gb|ACB66909.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 500

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   F +  +        + ++ +   ++   +LG  ++L     +R  H    K 
Sbjct: 1   MQFDWHYAFQLLWDKDFWRACVVVVELSVVAWLLGVLLGFPVAL-----ARQSHRPLLKR 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    LP LVL+   Y L    P          + +S  F +  IA+     
Sbjct: 56  AAAVYIWFF--RSLPLLVLLVFIYNLPQVFPA-------TSAVLSDPFTAGLIAMVLSET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R G+++VPRGQ+EA  ALG+      RL+++PQA+R  +P L ++++ ++K +
Sbjct: 107 AYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQRLIVMPQAIRIALPALANEFITIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q     E +L   F Y+ +  + +  +  L   + +  +
Sbjct: 167 SLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLLGYLERHLDVSRR 225



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 66/182 (36%), Gaps = 12/182 (6%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
             +   ++G  V   R S   L+     VY+  FR++P LV++ F+Y  +  V P     
Sbjct: 31  AWLLGVLLGFPVALARQSHRPLLKRAAAVYIWFFRSLPLLVLLVFIYN-LPQVFPATSAV 89

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVLSLFATRLSRHFHEK 214
           +  PF   L    LS      + +    +            LGI  +     +      +
Sbjct: 90  LSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQRLIVMPQAIR 149

Query: 215 TGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              ALP L      I  L +LV +I+L   L   + +  Q   +  + ++  F  + I  
Sbjct: 150 I--ALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVT 207

Query: 274 SC 275
             
Sbjct: 208 VF 209


>gi|91781168|ref|YP_556375.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693828|gb|ABE37025.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 319

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 121/271 (44%), Gaps = 14/271 (5%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +  R +  +++          V+  P+    + F     +  LS   LT+          
Sbjct: 40  KWGRWLAAVIMAVLAVWLGWGVVTNPNFQWDVVFQYLTAHVVLSGLGLTLWLTCAAMAIG 99

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            VLG +L++      R            LY+  F   G P LV +   + L    P +  
Sbjct: 100 IVLGTLLAVM-----RTSSNPFLSVPAQLYLWFF--RGTPVLVQLIFWFNLAILIPQISI 152

Query: 254 FNFIGGSTVS-------PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               G              + +  + L     A++AEIVR+G++++  GQ EAA ALG+T
Sbjct: 153 AIPFGPVLFHGSANDLITPYTAALLGLGLNEGAYMAEIVRAGILSIDPGQQEAARALGMT 212

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++LPQA+R I+PP  ++ + +LK +SL   +  +DL+    ++ ++T Q I +
Sbjct: 213 PARILRRIVLPQAIRIIVPPAGNETIGMLKTTSLVSVIALSDLLYSVESVSSRTFQTIPL 272

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +++    YL ++ +++L  +R+   + L  +
Sbjct: 273 LVVACIWYLVVTSVLSLLQSRIERHLCLTRR 303



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 47/116 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A  +L G   T WL  + M    ++GTL+   R S+N  ++   ++Y+  FR  P LV +
Sbjct: 78  AHVVLSGLGLTLWLTCAAMAIGIVLGTLLAVMRTSSNPFLSVPAQLYLWFFRGTPVLVQL 137

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            F +   + +  I       P     +   L  P         +   +++  IV +
Sbjct: 138 IFWFNLAILIPQISIAIPFGPVLFHGSANDLITPYTAALLGLGLNEGAYMAEIVRA 193


>gi|331700315|ref|YP_004336554.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
 gi|326955004|gb|AEA28701.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
          Length = 302

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 10/216 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-- 244
             + V S  +GIV  +    + R             YI  F   G P +  +     L  
Sbjct: 73  LVLTVLSMAIGIVGGVGL-AVMRQSPNPVVSGAAATYIWLF--RGTPLIAQLLFWNFLAA 129

Query: 245 -----HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                    P   +F  +  + +  +F +  + L    AA++AEIVR G+++V RGQ EA
Sbjct: 130 LYPRLSLGVPFGPEFISVDTNVLITQFAACLLGLGLNEAAYMAEIVRGGMLSVDRGQAEA 189

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALG+T  +  R ++LPQAMR I+PP  ++ +++LK +SL V +G+ +L++    I NQ
Sbjct: 190 AGALGMTRSQTMRRIVLPQAMRVIVPPTGNETISMLKTTSLVVVIGYFELLTSAQRISNQ 249

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             Q I ++++  F YL L+ ++ +    +  +    
Sbjct: 250 NFQVIPLLIVAAFWYLVLTSLLTIGQGFVERRFGRG 285



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 37/116 (31%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G  NT  L    M    + G  +   R S N +V+     Y+ +FR  P +  + F 
Sbjct: 65  ILNGLRNTLVLTVLSMAIGIVGGVGLAVMRQSPNPVVSGAAATYIWLFRGTPLIAQLLFW 124

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
                    +       P  + ++   L            +   +++  IV     
Sbjct: 125 NFLAALYPRLSLGVPFGPEFISVDTNVLITQFAACLLGLGLNEAAYMAEIVRGGML 180


>gi|312879705|ref|ZP_07739505.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Aminomonas paucivorans DSM 12260]
 gi|310782996|gb|EFQ23394.1| amino acid ABC transporter membrane protein, PAAT family ;amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Aminomonas paucivorans DSM 12260]
          Length = 512

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 14/227 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L           K+ V + +L + L      + R F  K   AL + YI    I G
Sbjct: 286 YAGFLPIFGEAAVVTLKVSVTAMLLAMALGFLL-AVIRVFGPKWASALAVAYIEA--IRG 342

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L+ +   +                       F++  + L    AA+ AE  R+GL+A
Sbjct: 343 TPVLIQLFFIFY-----------GLPNVGIKLSPFLAGALGLGLNYAAYEAENYRAGLLA 391

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPRGQMEAA+ L +T  +A R V++PQA R +IPP+T+ +++LLK+SSL   +   DL  
Sbjct: 392 VPRGQMEAALGLSMTRWQALRHVVIPQAFRVVIPPVTNDFISLLKDSSLVSIITMVDLTK 451

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G I           ++   IYL L +           + ++++++
Sbjct: 452 AYGQIAATYYDYFGTGIMVAAIYLLLGLPFVRLSRWAERRFSVQDRE 498



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 3/129 (2%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           V T  ++ + M+ A  +G L+   R+   K  + +   Y+E  R  P L+ +FF++  + 
Sbjct: 298 VVTLKVSVTAMLLAMALGFLLAVIRVFGPKWASALAVAYIEAIRGTPVLIQLFFIFYGLP 357

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           +V       +    G+ LN              A   V    +   L L  TR     H 
Sbjct: 358 NVGIKLSPFLAGALGLGLNYAAYEAENYRAGLLA---VPRGQMEAALGLSMTRWQALRHV 414

Query: 214 KTGKALPLL 222
              +A  ++
Sbjct: 415 VIPQAFRVV 423


>gi|322517586|ref|ZP_08070455.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322123846|gb|EFX95420.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 569

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 17/225 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKAL-----PLLYISTF 227
                         I +   V+G  + L     R +     K    L      +L +   
Sbjct: 344 NWPQFLRGTGITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIE 403

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V   + Y                        ++    +S  T A+++EIVR 
Sbjct: 404 VFRGTPMIVQSMVIYYGTAQA----------FGVNIDRTLAAVFIVSINTGAYMSEIVRG 453

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   
Sbjct: 454 GIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVV 513

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   G T+ +QT Q  +   +   IY  L+  +   +  +  ++
Sbjct: 514 ELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRL 558



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G +  T IG ++G  R +            KL  W+  VY+EV
Sbjct: 345 WPQFLRGTGITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEV 404

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 405 FRGTPMIVQSMVIYYGTAQAF 425


>gi|315640503|ref|ZP_07895611.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483707|gb|EFU74195.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 547

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 102/230 (44%), Gaps = 5/230 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F   L    ++     +     + V S ++G+ L  F   + +  +      +  +++S 
Sbjct: 319 FVPSLIPSIIAQLLPKLPITLLMTVVSAIIGLGLG-FLIAVVKIRNTPVLTQICSVFVSF 377

Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             + G P LV + L +       + +  Q          P  + ++IA     AA+ +E 
Sbjct: 378 --MRGTPQLVQLFLSFYGFPILVEWLSQQMGVTANVNAIPALVYVFIAFGLNEAAYTSET 435

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L++V + ++EAA ++GLT+ +    ++LP A+   +P L + +++LLK +SLA  V
Sbjct: 436 FRAALLSVNKNEIEAARSIGLTNVQTMMRIILPSALIVALPNLVNSFISLLKATSLAFTV 495

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              D++     I     +  E  +    +Y  + ++I     R+  K+ +
Sbjct: 496 TIIDIMGQTRIIAGANLRFFEAYIAVALVYWVMCLLIEQVAKRIERKLNV 545



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 5/89 (5%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++P     S    +L     T  +     I    +G L+   ++    ++  IC V+V 
Sbjct: 322 SLIP-----SIIAQLLPKLPITLLMTVVSAIIGLGLGFLIAVVKIRNTPVLTQICSVFVS 376

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
             R  P LV +F  +     ++      +
Sbjct: 377 FMRGTPQLVQLFLSFYGFPILVEWLSQQM 405


>gi|222082232|ref|YP_002541597.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726911|gb|ACM30000.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 319

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 125/290 (43%), Gaps = 24/290 (8%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
                +   V  +    V +      +   F    +       P  +        ++   
Sbjct: 20  VANAHSPFPVGRLAAWVVTL-----AIAAYFAWSVAGNENFGWPVVAHYFFDPTVISG-- 72

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +  +  + V +   GIVL L    ++R   ++   +L  L+I  F   G P L
Sbjct: 73  -------LYVSLGLTVVAMAFGIVLGLLL-AVARLSKDRLANSLASLFIWFF--RGTPLL 122

Query: 236 VLIALKYQLH-------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           V +   Y L           P    F     ++V     +    L+   AA++AEI+R G
Sbjct: 123 VQLIFWYNLSTLFPTLSIGIPFGPTFMSWDTNSVISPMTAAIAGLALNEAAYMAEIIRGG 182

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L++V +GQ E A A G+T  +A   +++PQAMRSI+PP  +Q ++++K +SL   +  AD
Sbjct: 183 LLSVDKGQFETAEAFGMTRARALSRIIIPQAMRSIVPPTGNQLISMIKATSLVSVIAMAD 242

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+    +I N+T + + ++L+ +  YL ++ ++ +  + +       +++
Sbjct: 243 LLYSVQSIYNRTFEVVPMLLVAVIWYLLITSVLNVGQSYIERYYGRGDRR 292



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 2/102 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   +  L    M    ++G L+   RLS ++L   +  +++  FR  P LV + F Y
Sbjct: 70  ISGLYVSLGLTVVAMAFGIVLGLLLAVARLSKDRLANSLASLFIWFFRGTPLLVQLIFWY 129

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
              LS L       +     F++    S  +      A + +
Sbjct: 130 N--LSTLFPTLSIGIPFGPTFMSWDTNSVISPMTAAIAGLAL 169


>gi|329938379|ref|ZP_08287804.1| putative ABC transporter permease protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302352|gb|EGG46243.1| putative ABC transporter permease protein [Streptomyces
           griseoaurantiacus M045]
          Length = 341

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  ++ +      V SV+        +    F     L    LT+     + V  F+L
Sbjct: 44  RLLAAVLALLACVMLVNSVVRNKAFQWDVVGRYFTTTAVLDGLLLTLWLTGAVMVLGFLL 103

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKP 249
           G VL++      R       + L   Y+  F     P LV +   +        L    P
Sbjct: 104 GTVLAVM-----RLSANPVLRTLSWGYVWIF--RSTPLLVQLLFWFNIGALYPTLGLGVP 156

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              QF  +    +    ++  I L+ +  A+ AE+VR G+++V  GQ EAA ALGL+ R+
Sbjct: 157 FGPQFVTVKTVNLLGPTLTAVIGLTLHETAYAAEVVRGGILSVDPGQTEAAQALGLSRRR 216

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQAMRSI+P   +  +  LK +S+   +   DL+     + NQT Q I ++++
Sbjct: 217 TLRRIVVPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLLMV 276

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y++++ ++      +    A  + +
Sbjct: 277 ATLWYIAVTTVLGAGQFYVERYYARGDAR 305



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 28/49 (57%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           M+   ++GT++   RLSAN ++  +   YV +FR+ P LV + F +   
Sbjct: 97  MVLGFLLGTVLAVMRLSANPVLRTLSWGYVWIFRSTPLLVQLLFWFNIG 145


>gi|169831297|ref|YP_001717279.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Desulforudis audaxviator MP104C]
 gi|169638141|gb|ACA59647.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Desulforudis audaxviator MP104C]
          Length = 235

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +      +I V S   G ++ LFA  L R    +  + L   Y+  F   G P L
Sbjct: 8   LPLLLVGAKLTFQITVLSVGFGCIIGLFAG-LCRLSRSRVLRYLATGYVDFF--RGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVS--------PEFMSLYIALSCYTAAFIAEIVRS 287
           V I + Y        + Q   +    +           +    +  S  + A+IAEI R+
Sbjct: 65  VQIFMLYFGMPQVVEMLQLYLLNEYGIPKMVDVSNVSRYWIAVLGCSLNSGAYIAEIFRA 124

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ RGQMEAA +LG+T  +A R V+LPQA + +IPPL ++++ +LK++SL   +G  
Sbjct: 125 GVQSIERGQMEAARSLGMTQNQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGVE 184

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L   G  II    Q+  I      IYL +++  +  ++ L  ++   ++
Sbjct: 185 ELTRKGQLIIAVNYQSAAIWFAVAMIYLLMTLTFSRIVDWLERRLKTDDR 234



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 42/81 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   TF +    +    IIG   G  RLS ++++ ++   YV+ FR  P LV IF L
Sbjct: 11  LLVGAKLTFQITVLSVGFGCIIGLFAGLCRLSRSRVLRYLATGYVDFFRGTPLLVQIFML 70

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y  +  V+ +    ++  +G+
Sbjct: 71  YFGMPQVVEMLQLYLLNEYGI 91


>gi|295107159|emb|CBL04702.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 480

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 120/259 (46%), Gaps = 15/259 (5%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P   +  +L +         +  + L F   +    +         +  + V SF L I 
Sbjct: 177 PAEQLSSWLNQQDWVKAWNSNKFLHLFFDPAIIVTSVPALFAGWLVSIGVVVVSFPLAIP 236

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L L  + L R    +  +A+   YI+  ++ G P  + + + +   F  P++        
Sbjct: 237 LGLLLSFL-RMAKHRLPRAIGATYIN--IVRGTPLFLQLYIAF---FGLPLM-------- 282

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                 F    I L   ++A++AEI R+G+ ++ +GQ EAA +LG+   +    V++PQ 
Sbjct: 283 GVQMDNFTMGAIVLVMNSSAYLAEIFRAGIQSISQGQFEAARSLGMNGAQTMFFVIIPQT 342

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R +IP +TS+++ + K++SL  AVG  +L+    TI   TG  +   ++    YL ++I
Sbjct: 343 VRRVIPTMTSEFILMYKDTSLLAAVGVTELMMYAKTITAATGN-VTPYIVAAGFYLIVTI 401

Query: 380 MIALFMNRLNAKIALKEKK 398
            +   +N + A+++   +K
Sbjct: 402 PLTKLINTMEARMSNGRRK 420



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 36/85 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G++ +  +       A  +G L+   R++ ++L   I   Y+ + R  P  + ++ 
Sbjct: 215 ALFAGWLVSIGVVVVSFPLAIPLGLLLSFLRMAKHRLPRAIGATYINIVRGTPLFLQLYI 274

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
            +  +  +    D+  +    + +N
Sbjct: 275 AFFGLPLMGVQMDNFTMGAIVLVMN 299


>gi|228476498|ref|ZP_04061188.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|228251919|gb|EEK10965.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
          Length = 515

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 17/225 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKAL-----PLLYISTF 227
                         I +   V+G  + L     R +     K    L      +L +   
Sbjct: 290 NWPQFLRGTGITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIE 349

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V   + Y   +        N           ++    +S  T A+++EIVR 
Sbjct: 350 VFRGTPMIVQSMVIY---YGTAQAFGINIDRT-------LAAVFIVSINTGAYMSEIVRG 399

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   
Sbjct: 400 GIFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVV 459

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   G T+ +QT Q  +   +   IY  L+  +   +  +  ++
Sbjct: 460 ELYFAGNTVASQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRL 504



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G +  T IG ++G  R +            KL  W+  VY+EV
Sbjct: 291 WPQFLRGTGITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKLFGWVLNVYIEV 350

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 351 FRGTPMIVQSMVIYYGTAQAF 371


>gi|212695841|ref|ZP_03303969.1| hypothetical protein ANHYDRO_00374 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677166|gb|EEB36773.1| hypothetical protein ANHYDRO_00374 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 455

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-------RLSRHFHEKTGKALP 220
               ++  ++    T+  +    +  F +G+V+++           +  +  +K    + 
Sbjct: 220 WTEYSSLFINGIFSTLFISIISTIIGFFIGLVVAVIRKTNVDKNKNIVGYVLQKIINFIL 279

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  F   G P +V   L +          QF  I  ST+    ++ +I +S  T A+
Sbjct: 280 AAYIEIF--RGTPMMVQAILIFYGA------KQFLAIDMSTM----LAAFIIVSINTGAY 327

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E+VR G+ +V  GQ EA  ALG+TH +    V++PQ ++SI+P + ++++  +K++S+
Sbjct: 328 LSEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPAIANEFVVNIKDTSV 387

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   +L  V  +I   T Q  +  LI   IY  L+ +    +  L  ++  KE
Sbjct: 388 LNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFVTTRIILLLERRLNNKE 443



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 12/83 (14%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICRVY 132
           Y++  + G  +T +++    I    IG +V   R +              K++ +I   Y
Sbjct: 223 YSSLFINGIFSTLFISIISTIIGFFIGLVVAVIRKTNVDKNKNIVGYVLQKIINFILAAY 282

Query: 133 VEVFRNIPPLVVIFFLYKSVLSV 155
           +E+FR  P +V    ++      
Sbjct: 283 IEIFRGTPMMVQAILIFYGAKQF 305


>gi|78044176|ref|YP_359363.1| glutamine ABC transporter permease [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996291|gb|ABB15190.1| glutamine ABC transporter, permease protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 228

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 6/212 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              KI V +  LG ++ LFA  L R       K +  +Y+    I G P LV I + Y  
Sbjct: 21  VTLKITVIAVTLGSIIGLFAG-LMRIARNPLLKFIARVYVDF--IRGTPLLVQIFIIY-- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L      G       + +   + S  + A++AEI R+G+ ++ RGQMEAA +LG
Sbjct: 76  -YGFPQLWAALTGGQPHAISPWAAAIASTSINSGAYVAEIFRAGIQSIDRGQMEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +A R V+LPQA + +IPPL ++++ +LK++SL   +GF +L   G  II    +A 
Sbjct: 135 MTYGQAMRYVILPQAFKRVIPPLGNEFIAMLKDTSLLSVIGFEELARRGALIIGYNARAF 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E+      +YL ++++I+  ++    ++   +
Sbjct: 195 EVWFAVAILYLIMTLLISQLVSYTERRLKTGD 226



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +    +   +IIG   G  R++ N L+ +I RVYV+  R  P LV IF +
Sbjct: 15  LAEGALVTLKITVIAVTLGSIIGLFAGLMRIARNPLLKFIARVYVDFIRGTPLLVQIFII 74

Query: 149 YKSVLSVL 156
           Y     + 
Sbjct: 75  YYGFPQLW 82


>gi|91781317|ref|YP_556524.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693977|gb|ABE37174.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 299

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V   +     S +  P     +      +   L    +T+            +GI L+L 
Sbjct: 43  VALLMIGLGWSFVANPRIHWTVVGDYLFSRDILEGVLMTIVLTVYAMATGVFIGIALALM 102

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG------QFNFI 257
                R   +         Y++  ++ G+P LV +   Y L    P +G         F+
Sbjct: 103 -----RLSDDWFLSGFARSYVT--VMRGIPALVQLIFWYNLSAIFPHIGFSLPGLGSMFV 155

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             +       +  + L     A++AEIVRSG++ +  GQ EAA+A+GL+  +A   V+LP
Sbjct: 156 DANKAITPMTAAVLGLGLCEGAYMAEIVRSGILGIDAGQREAALAVGLSRAQAMLKVILP 215

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R I+PP  +Q + ++K +SLA  + F +L++    I N+T + I ++++    YL+L
Sbjct: 216 QALRIIVPPTGNQVIGMMKLTSLASVISFTELLTSAQLIFNRTFEVIPLLIVASLWYLAL 275

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           S+++++    L  +    +++
Sbjct: 276 SLVLSIGQRYLEQRFGRYKRR 296



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           + LG  F++      I   +V    D  ++  IL G + T  L    M     IG  +  
Sbjct: 48  IGLGWSFVANP---RIHWTVV---GDYLFSRDILEGVLMTIVLTVYAMATGVFIGIALAL 101

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            RLS +  ++   R YV V R IP LV + F Y 
Sbjct: 102 MRLSDDWFLSGFARSYVTVMRGIPALVQLIFWYN 135


>gi|254384681|ref|ZP_05000020.1| permease [Streptomyces sp. Mg1]
 gi|194343565|gb|EDX24531.1| permease [Streptomyces sp. Mg1]
          Length = 316

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 5/256 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V++  L   ++      +           +   LS    T+  +        +LGIV ++
Sbjct: 42  VIVVALLGWLVYAFSQGNVIWATVKDKLFDPAVLSGLGNTVIISVSSMALGLLLGIVFAV 101

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R        A+  LYI  F    +   +L+     L F    LG         V
Sbjct: 102 M-----RLSKNPVTGAVSWLYIWFFRGTPVYVQLLVWFNLSLIFQYINLGPIYKNETVDV 156

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              FM   + L     A++AEIVR+G+ +V  GQ EAA ALG+   K  R ++LPQAMR 
Sbjct: 157 MTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEAAHALGMPQTKTMRRIVLPQAMRV 216

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           IIPP  ++++N+LK SSL  AV + +L+     I N  G  +E++ +  F YL+L+ + +
Sbjct: 217 IIPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGNTAGAIMEMLFVASFWYLALTSVFS 276

Query: 383 LFMNRLNAKIALKEKK 398
           +    L  + A    +
Sbjct: 277 VGQYYLERRFARGSTR 292



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  ++ S M    ++G +    RLS N +   +  +Y+  FR  P  V +  
Sbjct: 73  AVLSGLGNTVIISVSSMALGLLLGIVFAVMRLSKNPVTGAVSWLYIWFFRGTPVYVQLLV 132

Query: 148 LYKSVL 153
            +   L
Sbjct: 133 WFNLSL 138


>gi|307702517|ref|ZP_07639471.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
 gi|307623929|gb|EFO02912.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus oralis ATCC 35037]
          Length = 521

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +      + L    ++ ++  
Sbjct: 289 WQQLLRGAGITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 349 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 502



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   +IG  +G  R +            KLV WI  VY
Sbjct: 286 SENWQQLLRGAGITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVY 345

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 346 IEIFRGTPMIVQSMVIYYGTAQAF 369


>gi|171315680|ref|ZP_02904914.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171099212|gb|EDT43985.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 500

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   F +  +        + ++ +   ++   ++G  ++L     +R  H    K 
Sbjct: 1   MQFDWHYAFQLLWDKDFWRACVVVVELSVVAWLLGVLIGFPVAL-----ARQSHRPLLKR 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    LP LVL+   Y L    P          + +S  F +  IA+     
Sbjct: 56  AAAVYIWFF--RSLPLLVLLVFIYNLPQVFPA-------TSAVLSDPFTAGLIAMVLSET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R G+++VPRGQ+EA  ALG+      R++++PQA+R  +P L ++++ ++K +
Sbjct: 107 AYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQRMIVMPQAIRIALPALANEFITIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q     E +L   F Y+ +  + +  +  L   + +  +
Sbjct: 167 SLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLLGYLERHLDVSRR 225



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 66/182 (36%), Gaps = 12/182 (6%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
             +   +IG  V   R S   L+     VY+  FR++P LV++ F+Y  +  V P     
Sbjct: 31  AWLLGVLIGFPVALARQSHRPLLKRAAAVYIWFFRSLPLLVLLVFIYN-LPQVFPATSAV 89

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVLSLFATRLSRHFHEK 214
           +  PF   L    LS      + +    +            LGI  +     +      +
Sbjct: 90  LSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFAGIQRMIVMPQAIR 149

Query: 215 TGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              ALP L      I  L +LV +I+L   L   + +  Q   +  + ++  F  + I  
Sbjct: 150 I--ALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVT 207

Query: 274 SC 275
             
Sbjct: 208 VF 209


>gi|24378751|ref|NP_720706.1| putative amino acid ABC transporter, permease protein, glutamine
           transport system [Streptococcus mutans UA159]
 gi|24376619|gb|AAN58012.1|AE014873_8 putative amino acid ABC transporter, permease protein, glutamine
           transport system [Streptococcus mutans UA159]
          Length = 517

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEKTGKALPLLYIST 226
               L    +T+  +    +   ++G+++ ++ T      L   + +K    L  +YI  
Sbjct: 291 WKALLRGTGVTLLISIIGTIAGLIIGLLIGVYRTAPKASNLILAWLQKIFGWLLTVYIEV 350

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V   + Y                        ++    +S  T A+++EIVR
Sbjct: 351 F--RGTPMIVQAMVIYYGTAQA----------FGVSLDRTLAAIFIVSINTGAYMSEIVR 398

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AV +GQ EAA ALG THR+  R ++LPQ +R+I+P   ++++  +K++S+   +  
Sbjct: 399 GGIFAVDKGQFEAATALGFTHRQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 458

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G T+  QT Q  +   I   IY  L+  +   +  +  K+
Sbjct: 459 VELYFSGNTVATQTYQYFQTFFIIAVIYFILTFTVTRILRLVERKM 504



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
             A+L G   T  ++  G I   IIG L+G  R +            K+  W+  VY+EV
Sbjct: 291 WKALLRGTGVTLLISIIGTIAGLIIGLLIGVYRTAPKASNLILAWLQKIFGWLLTVYIEV 350

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 351 FRGTPMIVQAMVIYYGTAQAF 371


>gi|312898833|ref|ZP_07758221.1| putative glutamine ABC transporter permease protein [Megasphaera
           micronuciformis F0359]
 gi|310619995|gb|EFQ03567.1| putative glutamine ABC transporter permease protein [Megasphaera
           micronuciformis F0359]
          Length = 219

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/225 (29%), Positives = 116/225 (51%), Gaps = 13/225 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    L      KI   S  +G +L L    + R    K  KA+ + Y++  +I G 
Sbjct: 7   WNSLPLLLLGAAMTIKITAISVGIGFLLGLII-SVCRLSGIKLLKAVSVCYVN--VIRGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I L Y   F  P +         T    F++  +A S  + A+++EI R+G+ +V
Sbjct: 64  PMLVQIFLIY---FALPQVLG-------TRIDPFLAAVLACSINSGAYVSEIFRAGIQSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEA  +LGL+  +    ++LPQA + +IPPL ++++++ K ++    +GF +L   
Sbjct: 114 DKGQMEAGRSLGLSWMQTMFYIILPQAFKHVIPPLGNEFISMTKETAQVSVIGFEELTRR 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  II++T  A+EI L    +YL +++ IA  ++ L  + A  ++
Sbjct: 174 GQLIISKTYGALEIWLAVAVLYLIMTLGIAQLVSYLERRFATDDR 218



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    +    +L+G   T  +    +    ++G ++   RLS  KL+  +   YV V R 
Sbjct: 3   FDLIWNSLPLLLLGAAMTIKITAISVGIGFLLGLIISVCRLSGIKLLKAVSVCYVNVIRG 62

Query: 139 IPPLVVIFFLYKSVLSV 155
            P LV IF +Y ++  V
Sbjct: 63  TPMLVQIFLIYFALPQV 79


>gi|303247516|ref|ZP_07333788.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491212|gb|EFL51104.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 269

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 100/192 (52%), Gaps = 14/192 (7%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R    K    +   Y+   ++ G+P LV +   Y              +G     P+ 
Sbjct: 92  LGRISRNKYINLVASTYVE--VVRGVPLLVQLFYIYY------------ALGRMVQVPDL 137

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  I++S    A++ E+ R+G+ A+P GQ EAA +LG    +    V+LPQA R+I+PP
Sbjct: 138 LAAVISMSVCYGAYMGEVFRAGITAIPIGQTEAARSLGFNRAQTMYHVILPQAWRTILPP 197

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + ++++ LLK++SL   +G ADL+  G    +++ +  E   +   IYL ++++++  ++
Sbjct: 198 VGNEFIALLKDTSLVSILGVADLLRRGREYASESFEYFETFTMVAVIYLIITLILSKLVS 257

Query: 387 RLNAKIALKEKK 398
            +  +++   K+
Sbjct: 258 IMEERLSHHVKR 269



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 68  AGFEIDQGIVPYTSDSSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           AG  +  G + Y     Y         G + TF +    +I A I+G + G GR+S NK 
Sbjct: 41  AGALLTLGCLLYFKPDPYLKIFRFVPDGILVTFQVTVYSIILALILGLITGLGRISRNKY 100

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
           +  +   YVEV R +P LV +F++Y ++  ++ +PD
Sbjct: 101 INLVASTYVEVVRGVPLLVQLFYIYYALGRMVQVPD 136


>gi|302536847|ref|ZP_07289189.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. C]
 gi|302445742|gb|EFL17558.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. C]
          Length = 315

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 5/256 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV+  +   ++                  +   LS    T+  +         LGI+ ++
Sbjct: 41  VVVAVILAWLVYAFSQGKIIWGTVGDKLFDPAVLSGLGNTIIISISAMALGLALGILFAV 100

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R         +  LYI  F    +   +L+     L F    LG         V
Sbjct: 101 M-----RLSKNPVTSFVSWLYIWFFRGTPVYVQLLVWFSLPLIFQYINLGPIYKNETVDV 155

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              FM   + L     A++AEIVR+G+ +V  GQ EA+ ALG+T  +  R V+LPQAMR 
Sbjct: 156 MTPFMVALLGLGLNEGAYMAEIVRAGIQSVDEGQTEASHALGMTQTQTMRRVVLPQAMRV 215

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           IIPP  ++++N+LK SSL  AV + +L+     I +  G  IE+  +    YL+L+ + +
Sbjct: 216 IIPPTGNEFINMLKTSSLVSAVQYTELLRASSNIGSTAGAVIEMYFVASIWYLALTSVFS 275

Query: 383 LFMNRLNAKIALKEKK 398
           +    L  + A    +
Sbjct: 276 VGQYYLERRYARGSLR 291



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 30/63 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  ++ S M     +G L    RLS N + +++  +Y+  FR  P  V +  
Sbjct: 72  AVLSGLGNTIIISISAMALGLALGILFAVMRLSKNPVTSFVSWLYIWFFRGTPVYVQLLV 131

Query: 148 LYK 150
            + 
Sbjct: 132 WFS 134


>gi|315612520|ref|ZP_07887433.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|322374942|ref|ZP_08049456.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C300]
 gi|315315501|gb|EFU63540.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|321280442|gb|EFX57481.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C300]
          Length = 521

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +      + L    ++ ++  
Sbjct: 289 WQQLLRGAGITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 349 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 502



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   +IG  +G  R +            KLV WI  VY
Sbjct: 286 SENWQQLLRGAGITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVY 345

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 346 IEIFRGTPMIVQSMVIYYGTAQAF 369


>gi|116490803|ref|YP_810347.1| ABC-type amino acid transport system, permease and periplasmic
           component [Oenococcus oeni PSU-1]
 gi|116091528|gb|ABJ56682.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Oenococcus oeni PSU-1]
          Length = 545

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 17/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF-----ATRLSRHFHEKTG 216
           +  +       N  L    +T+  +    V  F++G+++ +      A +  R +     
Sbjct: 296 NWFINIWKQYGNMLLRGIGMTLLLSIVGTVVGFIIGLLIGIVRTIPKAKKRPRRYLINFV 355

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             L  +YI  F   G P +V  A+ Y           FN     T      S  I +S  
Sbjct: 356 NWLLSVYIEIF--RGTPMIVQAAVFYYGAAQA-----FNINLDRT-----TSALIIVSIN 403

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T A++AEI+R G+I++ +GQ EAA ALG+TH +    ++LPQA+R+ IP +T++++  +K
Sbjct: 404 TGAYLAEIIRGGIISIDQGQFEAASALGMTHFQQMEKIVLPQAVRNSIPAVTNEFIVNIK 463

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++S+   +  ++L   G TI  Q  Q     L    IYL L+  I      +   +
Sbjct: 464 DTSVLSIISVSELFFTGSTIAGQNFQFFHTYLTISLIYLVLTFTITRIFRMIEKHL 519



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 10/83 (12%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   +L G   T  L+  G +   IIG L+G  R                V W+  VY+
Sbjct: 304 QYGNMLLRGIGMTLLLSIVGTVVGFIIGLLIGIVRTIPKAKKRPRRYLINFVNWLLSVYI 363

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           E+FR  P +V     Y       
Sbjct: 364 EIFRGTPMIVQAAVFYYGAAQAF 386


>gi|322373784|ref|ZP_08048319.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C150]
 gi|321277156|gb|EFX54226.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. C150]
          Length = 516

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 24/258 (9%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN-----AKIFVFSFVLGIVLSL 202
           L   ++S+ P   H      G F     +                 I +   V+G  + L
Sbjct: 259 LMNHIISIQPAEKHDETKKTGFFSQMATILSKNWPQFLRGTGITLLISIVGTVVGTFIGL 318

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLI--------FGLPTLVLIALKYQLHFDKPVLGQF 254
                 R   +   K + LL      I         G P +V   + Y   +        
Sbjct: 319 MIGVY-RTAPKAANKLVALLQKVFGWILNVYIEVFRGTPMIVQSMVIY---YGTAQAFGI 374

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N           ++  I +S  T A+++EIVR G+ AV +GQ EAA ALG +H +  R +
Sbjct: 375 NIDRT-------LAAVIIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGFSHGQTMRKI 427

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQ +R+I+P   ++++  +K++S+   +   +L   G T+  QT Q  +   +   IY
Sbjct: 428 VLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFAGNTVATQTYQYFQTFFVIAAIY 487

Query: 375 LSLSIMIALFMNRLNAKI 392
             L+  +   +  +  + 
Sbjct: 488 FVLTFTVTRILRYVERRF 505



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G +  T IG ++G  R +            K+  WI  VY+EV
Sbjct: 292 WPQFLRGTGITLLISIVGTVVGTFIGLMIGVYRTAPKAANKLVALLQKVFGWILNVYIEV 351

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 352 FRGTPMIVQSMVIYYGTAQAF 372


>gi|199597667|ref|ZP_03211095.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|229551247|ref|ZP_04439972.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258509811|ref|YP_003172562.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|199591474|gb|EDY99552.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus rhamnosus HN001]
 gi|229315410|gb|EEN81383.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257149738|emb|CAR88711.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259651074|dbj|BAI43236.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 482

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 18/232 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F     N  +     T+       +F  ++G +L+L   +LSR++  K    + 
Sbjct: 268 QDQDQGFWAKYGNYFIRGAIYTLVFAVLTVLFGTIIGTLLALM--KLSRNWLAKV---VA 322

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI    I G P LV   + +           F           F++  IA++  + A+
Sbjct: 323 NIYIEF--IRGTPLLVQAFIVF-----------FGTQILGLDLSAFVAGAIAMAINSGAY 369

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ +VP GQ EAA +LGL   +A R V+LPQAM++I P L ++++  +K SS+
Sbjct: 370 VAEIIRGGINSVPVGQTEAARSLGLHQSQAMRYVILPQAMKNIWPALGNEFVTDIKESSV 429

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G  +L+  G  +   + +    +++   +Y  ++  ++  +  +  + 
Sbjct: 430 LSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMTFTLSRLLRLIEKRF 481



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T   A   ++  TIIGTL+   +LS N L   +  +Y+E  R  P LV 
Sbjct: 278 YGNYFIRGAIYTLVFAVLTVLFGTIIGTLLALMKLSRNWLAKVVANIYIEFIRGTPLLVQ 337

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 338 AFIVFFGT 345


>gi|307704003|ref|ZP_07640937.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
 gi|307622469|gb|EFO01472.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus mitis SK597]
          Length = 521

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +      + L    ++ ++  
Sbjct: 290 WQQLLRGAGITLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEI 349

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 350 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 399

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 400 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 459

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 460 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|331005159|ref|ZP_08328559.1| polar amino acid ABC transporter, inner membrane subunit [gamma
           proteobacterium IMCC1989]
 gi|330421039|gb|EGG95305.1| polar amino acid ABC transporter, inner membrane subunit [gamma
           proteobacterium IMCC1989]
          Length = 315

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 15/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N       T  M     I  FS +  I++ L    L R         L  +YI   +I 
Sbjct: 104 VNEWRFGLITKGMMMTIYISFFSLIFAIIIGLVVGIL-RTTKNVIAMNLTTVYIE--IIR 160

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I + Y             FIG         +   ALS ++ A+IAEIVRSG+ 
Sbjct: 161 GTPLLVQIFIFY------------FFIGTVLDLDRMTAGIAALSIFSGAYIAEIVRSGIQ 208

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ E A +LGL++ +  RLV+LPQA+R  +PP+  Q++NL+K+SSL   +   DL 
Sbjct: 209 SIPQGQTEGAKSLGLSYLQTMRLVILPQAIRKTLPPMVGQFINLVKDSSLVSVIAITDLT 268

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  + + T    E+       YL L+ +++  + R        ++
Sbjct: 269 KAGREVASATFSPFEVWFTIALCYLLLTGILSFALQRFERSFRKTDR 315



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 8/142 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G + T +++F  +I A IIG +VG  R + N +   +  VY+E+ R  P LV IF  
Sbjct: 112 ITKGMMMTIYISFFSLIFAIIIGLVVGILRTTKNVIAMNLTTVYIEIIRGTPLLVQIFIF 171

Query: 149 YKSV--------LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           Y  +        ++            +   +   G+          AK    S++  + L
Sbjct: 172 YFFIGTVLDLDRMTAGIAALSIFSGAYIAEIVRSGIQSIPQGQTEGAKSLGLSYLQTMRL 231

Query: 201 SLFATRLSRHFHEKTGKALPLL 222
            +    + +      G+ + L+
Sbjct: 232 VILPQAIRKTLPPMVGQFINLV 253


>gi|76788643|ref|YP_328867.1| His/Glu/Gln/Arg/opine amino acid ABC transporter amino acid-binding
           protein/permease [Streptococcus agalactiae A909]
 gi|76563700|gb|ABA46284.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Streptococcus agalactiae
           A909]
          Length = 516

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 13/222 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFLIF 230
           + L     T+  +    +    +G+++ +F T   S +  +   + L   LL I   +  
Sbjct: 291 QFLRGTATTLLISMVGTIVGLFIGLLIGVFRTAPKSDNKLKAALQKLLGWLLNIYIEVFR 350

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V   + Y                        ++    +S  T A+++EIVR G+ 
Sbjct: 351 GTPMIVQSMVIYYGTAQA----------FGVSLDRTLAAIFIVSINTGAYMSEIVRGGIF 400

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +L 
Sbjct: 401 SVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELY 460

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 461 FSGNTVATQTYQYFQTFTIIAIIYFILTFTVTRTLRYIEKRF 502



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
            +  L G   T  ++  G I    IG L+G  R +            KL+ W+  +Y+EV
Sbjct: 289 GSQFLRGTATTLLISMVGTIVGLFIGLLIGVFRTAPKSDNKLKAALQKLLGWLLNIYIEV 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|170016959|ref|YP_001727878.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803816|gb|ACA82434.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 491

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 108/231 (46%), Gaps = 18/231 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F     N  +    +T+   A   V   +LG V +LF  +LS +F  K      +  I  
Sbjct: 279 FWSKYGNLFIKGTLITLALAAVAVVIGSILGTVFALF--KLSPNFLLK-----AVGNIYV 331

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV   + +           F           F +  +A+   +AA++AEI+R
Sbjct: 332 EYVRGTPLLVQAFMVF-----------FGTQVIGLNLSSFAAGALAMGLNSAAYVAEIIR 380

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQ EAA +LGL+  K  R ++LPQA+++I+P L ++++ ++K  S+   +G 
Sbjct: 381 SGINSVNYGQTEAARSLGLSKGKTMRFIILPQAIKNILPALGNEFVTVIKEGSVVSVIGV 440

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L+   G +   + +    +LI   IY  L+  I+  +     ++A   +
Sbjct: 441 GELMFQTGVVQGASFKPFFPLLITSMIYFVLTFGISRALGYAEKRMARTGR 491



 Score = 54.6 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y    + G + T  LA   ++  +I+GT+    +LS N L+  +  +YVE  R  P L
Sbjct: 281 SKYGNLFIKGTLITLALAAVAVVIGSILGTVFALFKLSPNFLLKAVGNIYVEYVRGTPLL 340

Query: 143 VVIFFLYKSV 152
           V  F ++   
Sbjct: 341 VQAFMVFFGT 350


>gi|290581241|ref|YP_003485633.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254998140|dbj|BAH88741.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 517

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEKTGKALPLLYIST 226
               L    +T+  +    +   ++G+++ ++ T      L   + +K    L  +YI  
Sbjct: 291 WKALLRGTGVTLLISIIGTIAGLIIGLLIGVYRTAPKASNLILAWLQKIFGWLLTVYIEV 350

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V   + Y                        ++    +S  T A+++EIVR
Sbjct: 351 F--RGTPMIVQAMVIYYGTAQA----------FGVSLDRTLAAIFIVSINTGAYMSEIVR 398

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AV +GQ EAA ALG THR+  R ++LPQ +R+I+P   ++++  +K++S+   +  
Sbjct: 399 GGIFAVDKGQFEAATALGFTHRQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISV 458

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G T+  QT Q  +   I   IY  L+  +   +  +  K+
Sbjct: 459 VELYFSGNTVATQTYQYFQTFFIIAVIYFILTFTVTRILRLVERKM 504



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
             A+L G   T  ++  G I   IIG L+G  R +            K+  W+  VY+EV
Sbjct: 291 WKALLRGTGVTLLISIIGTIAGLIIGLLIGVYRTAPKASNLILAWLQKIFGWLLTVYIEV 350

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 351 FRGTPMIVQAMVIYYGTAQAF 371


>gi|117164571|emb|CAJ88117.1| putative ABC transporter permease [Streptomyces ambofaciens ATCC
           23877]
          Length = 334

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R       +      + SV+        L    F     L    LT+     + V  F+L
Sbjct: 36  RWATAAAALLVCAMVLNSVVRNQAFQWALVRRYFTTPAVLDGLLLTLWLTGAVMVLGFLL 95

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKP 249
           G VL++      R       + L   Y+  F     P LV +   +        L    P
Sbjct: 96  GTVLAVM-----RLSGNPVLRTLSWGYVWIF--RSTPLLVQLLFWFNIGALYPTLGLGIP 148

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              +F  +    +    ++  I L+ +  A+ AE+VR G+++V  GQ EAA ALGL+ R+
Sbjct: 149 FGPEFVSVKTVNLLGPTLTAVIGLTLHETAYAAEVVRGGILSVDPGQTEAAQALGLSRRR 208

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V++PQAMRSI+P   +  +  LK +S+   +   DL+     I NQT Q I ++++
Sbjct: 209 TLRRVVIPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLIYNQTYQVIPLLMV 268

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y++++ +++     +    A  + +
Sbjct: 269 ATLWYIAVTSVLSAGQYYVERYYARGDSR 297



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 27/49 (55%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           M+   ++GT++   RLS N ++  +   YV +FR+ P LV + F +   
Sbjct: 89  MVLGFLLGTVLAVMRLSGNPVLRTLSWGYVWIFRSTPLLVQLLFWFNIG 137


>gi|294631351|ref|ZP_06709911.1| arginine/ornithine transporter [Streptomyces sp. e14]
 gi|292834684|gb|EFF93033.1| arginine/ornithine transporter [Streptomyces sp. e14]
          Length = 313

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 5/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH- 245
             + V S ++GIV  +    + R        ++   YI  F   G P LV + L + L  
Sbjct: 77  LLLTVLSMLIGIVGGIVL-AVMRLSKNPVTSSIAWFYIWFF--RGTPVLVQLFLWFNLGL 133

Query: 246 -FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F+   L  F     S      ++  + L    AA++AEI R+GL+AV  GQ EAA ALG
Sbjct: 134 VFEYINLMPFYKDYWSNFMTPLLTALLGLGLNEAAYMAEICRAGLLAVDEGQTEAAHALG 193

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++H K  R +++PQAMR I+PP  ++ +N+LK +SL  AV + +L      I   +G  +
Sbjct: 194 MSHGKTLRRIIIPQAMRVIVPPTGNEVINMLKTTSLVAAVQYPELFRFAQDIGTVSGAPV 253

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E+  +    YL L+ ++++    L    A    +
Sbjct: 254 EMYFLAAAWYLILTSVLSVGQYYLERYYARGSSR 287



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 2/124 (1%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     I  G   T  L    M+   + G ++   RLS N + + 
Sbjct: 48  YAFGQGKINWQAVPDYFFDDRITTGVGKTLLLTVLSMLIGIVGGIVLAVMRLSKNPVTSS 107

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I   Y+  FR  P LV +F  +   L    I        +        L+         A
Sbjct: 108 IAWFYIWFFRGTPVLVQLFLWFNLGLVFEYINLMPFYKDYWSNFMTPLLTALLGLGLNEA 167

Query: 188 KIFV 191
               
Sbjct: 168 AYMA 171


>gi|325685296|gb|EGD27410.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 527

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 13/225 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALP--LLYISTF 227
                L    +T+  +    +  F +G+++ +  T    ++  +K   A    LL +   
Sbjct: 291 YGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLAFCKWLLSVYVE 350

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V  A+ Y        + QF  I  +      ++  I +S  T A++AE++R 
Sbjct: 351 VFRGTPMMVQAAVIYY------GIAQFWHINLNRT----VAALIIVSINTGAYLAEVIRG 400

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  +K++S+   +  +
Sbjct: 401 GIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNEFIVNIKDTSVLSIISVS 460

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L  VG TI +Q+ Q  +  L+   IYL L+  I    N +   I
Sbjct: 461 ELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEKHI 505



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
           +Y   IL G   T  ++  G I    IG LVG  R                  W+  VYV
Sbjct: 290 NYGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLAFCKWLLSVYV 349

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +     
Sbjct: 350 EVFRGTPMMVQAAVIYYGIAQFWH 373


>gi|297162207|gb|ADI11919.1| putative ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 493

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    L V+    + +  ++  P     +     L+   ++   +T+   A   +  F L
Sbjct: 196 RWAAALAVLVLTVQFLHGLVTNPVWQWSVFGEYVLSETIVTAVGVTLQLTAYSMLLGFAL 255

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKP 249
           G VL+       R       + +   Y+  F    +P +V +   + L           P
Sbjct: 256 GTVLAFM-----RLSASPVLRTVAWTYVWIF--RSIPMIVQLVFWFNLGALYRELGIGIP 308

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F  +  + +     +  I L+ + AA+ AEIVR G+++V RGQ+EAA ALG+   +
Sbjct: 309 FGPVFWSVSSNDLIGTIGAALIGLTLHQAAYCAEIVRGGVLSVDRGQLEAAAALGIPRLR 368

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQAMR+I+P   S+ ++LLK +S+   +   +L      I  + G  I ++++
Sbjct: 369 QIRRIVLPQAMRAILPTAGSEIISLLKGTSVVYVMAIGELFYQVKVIYGRNGMVIPLLMV 428

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y+ L+ +++     +    A   ++
Sbjct: 429 ATAWYVFLTSVLSAVQYYVERHFARGSER 457



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    +  TA+ V    T  L    M+    +GT++   RLSA+ ++  +   YV +FR
Sbjct: 227 EYVLSETIVTAVGV----TLQLTAYSMLLGFALGTVLAFMRLSASPVLRTVAWTYVWIFR 282

Query: 138 NIPPLVVIFFLYK 150
           +IP +V + F + 
Sbjct: 283 SIPMIVQLVFWFN 295


>gi|312277580|gb|ADQ62237.1| Amino acid (Glutamine) ABC transporter substrate binding
           protein/permease protein [Streptococcus thermophilus
           ND03]
          Length = 516

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 103/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    V    +G+++ ++ T   + +      + +   +++ ++  
Sbjct: 291 WPQFLRGTAITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFLNVYIEV 350

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A+++EIVR G
Sbjct: 351 FRGTPMIVQSMVIY---YGTAQAFGINIDRT-------LAAIFIVSINTGAYMSEIVRGG 400

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG +H +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 401 IFAVDKGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVE 460

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   +   IY  L+  +   +  +  ++
Sbjct: 461 LYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRL 504



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G +  T IG ++G  R +            K+  W   VY+EV
Sbjct: 291 WPQFLRGTAITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFLNVYIEV 350

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 351 FRGTPMIVQSMVIYYGTAQAF 371


>gi|325124980|gb|ADY84310.1| Putative glutamine ABC transporter [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 527

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 115/225 (51%), Gaps = 13/225 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALP--LLYISTF 227
                L    +T+  +    +  F +G+++S+  T    ++  +K   A    LL +   
Sbjct: 291 YGQMILEGIGMTLLISLVSTIAGFFIGLLVSIVRTIPEPKNKFKKGLLAFCKWLLSVYVE 350

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V  A+ Y        + QF  I  +      ++  I +S  T A++AE++R 
Sbjct: 351 IFRGTPMMVQAAVIYY------GIAQFWHINLNRT----VAALIIVSINTGAYLAEVIRG 400

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  +K++S+   +  +
Sbjct: 401 GIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNEFIVNIKDTSVLSIISVS 460

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L  VG TI +Q+ Q  +  L+   IYL L+  I    N +   I
Sbjct: 461 ELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEKHI 505



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
           +Y   IL G   T  ++    I    IG LV   R                  W+  VYV
Sbjct: 290 NYGQMILEGIGMTLLISLVSTIAGFFIGLLVSIVRTIPEPKNKFKKGLLAFCKWLLSVYV 349

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 350 EIFRGTPMMVQAAVIYYGIAQFWH 373


>gi|322411105|gb|EFY02013.1| putative glutamine-binding periplasmic protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 522

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLNIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRYIERRF 502



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLNIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|315222036|ref|ZP_07863947.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315189002|gb|EFU22706.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 521

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 17/225 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTF----- 227
                         I +   + G+++ L     R +     K    L  L+         
Sbjct: 288 NWPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPTAKNKVLAMLQTLFSWFLNIYIE 347

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V   + Y                        ++    +S  T A+++EIVR 
Sbjct: 348 IFRGTPMIVQSMVIYYGTAQA----------FGVSIDRTIAAIFIVSINTGAYMSEIVRG 397

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV +GQ EAA ALG+TH +  R V+LPQ +R+I+P   ++++  +K++S+   +   
Sbjct: 398 GIFAVDKGQFEAATALGMTHNQTMRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVV 457

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   G TI  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 458 ELYFSGNTIATQTYQYFQTFTIIAVIYFVLTFTVTRILRYVERRF 502



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVEV 135
               L G   T  ++ +G I   IIG L+G  R +             L +W   +Y+E+
Sbjct: 289 WPQFLRGAGLTLLISITGTIAGLIIGLLIGVYRTAPTAKNKVLAMLQTLFSWFLNIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|300811497|ref|ZP_07091991.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497570|gb|EFK32598.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 527

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 13/225 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALP--LLYISTF 227
                L    +T+  +    +  F +G+++ +  T    ++  +K   A    LL +   
Sbjct: 291 YGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLAFCKWLLSVYVE 350

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V  A+ Y        + QF  I  +      ++  I +S  T A++AE++R 
Sbjct: 351 VFRGTPMMVQAAVIYY------GIAQFWHINLNRT----VAALIIVSINTGAYLAEVIRG 400

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  +K++S+   +  +
Sbjct: 401 GIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNEFIVNIKDTSVLSIISVS 460

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L  VG TI +Q+ Q  +  L+   IYL L+  I    N +   I
Sbjct: 461 ELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEKHI 505



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
           +Y   IL G   T  ++  G I    IG LVG  R                  W+  VYV
Sbjct: 290 NYGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLAFCKWLLSVYV 349

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +     
Sbjct: 350 EVFRGTPMMVQAAVIYYGIAQFWH 373


>gi|313122913|ref|YP_004033172.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312279476|gb|ADQ60195.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 527

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 13/225 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALP--LLYISTF 227
                L    +T+  +    +  F +G+++ +  T    ++  +K   A    LL +   
Sbjct: 291 YGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLAFCKWLLSVYVE 350

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V  A+ Y        + QF  I  +      ++  I +S  T A++AE++R 
Sbjct: 351 VFRGTPMMVQAAVIYY------GIAQFWHINLNRT----VAALIIVSINTGAYLAEVIRG 400

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  +K++S+   +  +
Sbjct: 401 GIISTPKGQFEAASALGMTHNQRMWSIILPQAIRNCLPSITNEFIVNIKDTSVLSIISVS 460

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L  VG TI +Q+ Q  +  L+   IYL L+  I    N +   I
Sbjct: 461 ELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEKHI 505



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
           +Y   IL G   T  ++  G I    IG LVG  R                  W+  VYV
Sbjct: 290 NYGQMILEGIGMTLLISLVGTIAGFFIGLLVGIVRTIPEPKNKFKKGLLAFCKWLLSVYV 349

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +     
Sbjct: 350 EVFRGTPMMVQAAVIYYGIAQFWH 373


>gi|284043462|ref|YP_003393802.1| polar amino acid ABC transporter inner membrane subunit
           [Conexibacter woesei DSM 14684]
 gi|283947683|gb|ADB50427.1| polar amino acid ABC transporter, inner membrane subunit
           [Conexibacter woesei DSM 14684]
          Length = 335

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 122/268 (45%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   +V+  +   V SV+        +      + R +    LT++      V   ++
Sbjct: 34  RWVSAAIVLLIVASLVRSVVTNDRFEWNVVGDYLFDPRVMDGVVLTIEITIAAMVAGVLI 93

Query: 197 GIVLSLFA------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           G++L++              F+    +  P+L    F  F       I L   + F  P 
Sbjct: 94  GVLLAVMRLSPNPLVAAVAGFYVWIFRGTPVLVQLLFWNFIAALYPEIDLG--IPFIAPD 151

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   +    +T    F+   + L     A++AEIVR+G+++V  GQ  A+ ALG+T  + 
Sbjct: 152 LISLD---ANTFITPFVVALLGLGLNEGAYMAEIVRAGVLSVDEGQTHASQALGMTRLQT 208

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++LPQAMR IIPP  ++ +++LK +SL   + +A+L+     I ++  + I+++++ 
Sbjct: 209 MRRIVLPQAMRVIIPPTGNETISMLKTTSLVSVIAYAELLYASQLIYSENYRTIQLLIVA 268

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++ +    L  +     ++
Sbjct: 269 SIWYLVMTTVLTIGQAWLERRFGRGTRR 296



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 30/60 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  +  + M+   +IG L+   RLS N LVA +   YV +FR  P LV + F    
Sbjct: 75  GVVLTIEITIAAMVAGVLIGVLLAVMRLSPNPLVAAVAGFYVWIFRGTPVLVQLLFWNFI 134


>gi|15807149|ref|NP_295878.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6459953|gb|AAF11703.1|AE002049_8 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 291

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/214 (30%), Positives = 116/214 (54%), Gaps = 8/214 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ + S ++G+++ + A  + R       +A    +I  +LI G P LV I   Y 
Sbjct: 86  QMTLKLTLVSGLIGLLVGMIAG-IMRSSPSALVRAPASFFI--WLIRGTPLLVQILFVYN 142

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +      IG +    EF S  IAL+    A+ AE++R+G++AVPRGQ EAA +L
Sbjct: 143 -----ALPPLLKTIGINLELNEFWSAVIALALNVGAYNAEVIRAGILAVPRGQSEAARSL 197

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +    V+LPQA+R ++PPL +  + LLK+SSLA  +   +L   G  + +++ Q 
Sbjct: 198 GLSAGQTMNAVVLPQALRIVVPPLVNNLVALLKDSSLASTIALLELTLSGQRVSSESFQP 257

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + ++     +YL+L+ ++ LF ++L  ++ +  +
Sbjct: 258 VPVLTTVAAVYLALTTVLTLFTDQLEKRVKIASR 291



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                YA   + G   T  L     +   ++G + G  R S + LV      ++ + R  
Sbjct: 72  EPVGQYADLFVEGAQMTLKLTLVSGLIGLLVGMIAGIMRSSPSALVRAPASFFIWLIRGT 131

Query: 140 PPLVVIFFLYKSVL 153
           P LV I F+Y ++ 
Sbjct: 132 PLLVQILFVYNALP 145


>gi|300173515|ref|YP_003772681.1| amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811]
 gi|299887894|emb|CBL91862.1| Amino acid ABC transporter [Leuconostoc gasicomitatum LMG 18811]
          Length = 491

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 18/231 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F     N  +    +T+   A   V   VLG VL+LF     +       K+L  +YI  
Sbjct: 279 FWAKYGNLFIKGTLITLALAAIAVVIGAVLGTVLALF-----KLSPNFILKSLGNIYIE- 332

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV   + +           F           F +  +A+   +AA++AEI+R
Sbjct: 333 -YVRGTPLLVQAFMVF-----------FGTQVIGLNLSAFAAGALAMGLNSAAYVAEIIR 380

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQ EAA +LGL+  K+ R ++LPQA+++I+P L ++++ ++K  S+   +G 
Sbjct: 381 SGINSVNYGQTEAARSLGLSKGKSMRYIILPQAIKNILPALGNEFVTVIKEGSVVSVIGV 440

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L+   G +   + Q    +LI   IY  L+  I+  +     ++A   +
Sbjct: 441 GELMFQTGVVQGASFQPFFPLLITSLIYFVLTFSISRALGYAEKRMARSSR 491



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA   ++   ++GT++   +LS N ++  +  +Y+E  R  P LV 
Sbjct: 283 YGNLFIKGTLITLALAAIAVVIGAVLGTVLALFKLSPNFILKSLGNIYIEYVRGTPLLVQ 342

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 343 AFMVFFGT 350


>gi|293364251|ref|ZP_06610977.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|291317097|gb|EFE57524.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
          Length = 543

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +      + L    ++ ++  
Sbjct: 311 WQQLLRGAGITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVYIEI 370

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 371 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 420

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 421 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 480

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 481 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 524



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   +IG  +G  R +            KLV WI  VY
Sbjct: 308 SENWQQLLRGAGITLLISIIGTITGLLIGLAIGVFRTAPLSENKAMYALQKLVGWILNVY 367

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 368 IEIFRGTPMIVQSMVIYYGTAQAF 391


>gi|116627112|ref|YP_819731.1| ABC-type amino acid transport system, permease and periplasmic
           component [Streptococcus thermophilus LMD-9]
 gi|116100389|gb|ABJ65535.1| ABC-type amino acid transport system, permease and periplasmic
           component [Streptococcus thermophilus LMD-9]
          Length = 516

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 103/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    V    +G+++ ++ T   + +      + +   +++ ++  
Sbjct: 291 WPQFLRGTAMTLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFLNVYIEV 350

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A+++EIVR G
Sbjct: 351 FRGTPMIVQSMVIY---YGTAQAFGINIDRT-------LAAIFIVSINTGAYMSEIVRGG 400

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 401 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVE 460

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   +   IY  L+  +   +  +  ++
Sbjct: 461 LYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRL 504



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G +  T IG ++G  R +            K+  W   VY+EV
Sbjct: 291 WPQFLRGTAMTLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFLNVYIEV 350

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 351 FRGTPMIVQSMVIYYGTAQAF 371


>gi|55820257|ref|YP_138699.1| polar amino acid ABC uptake transporter substrate binding
           protein/membrane-spanning protein [Streptococcus
           thermophilus LMG 18311]
 gi|55822147|ref|YP_140588.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease [Streptococcus thermophilus CNRZ1066]
 gi|55736242|gb|AAV59884.1| polar amino acid ABC uptake transporter substrate binding
           protein/membrane-spanning protein [Streptococcus
           thermophilus LMG 18311]
 gi|55738132|gb|AAV61773.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 516

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 103/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    V    +G+++ ++ T   + +      + +   +++ ++  
Sbjct: 291 WPQFLRGTAITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFLNVYIEV 350

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A+++EIVR G
Sbjct: 351 FRGTPMIVQSMVIY---YGTAQAFGINIDRT-------LAAIFIVSINTGAYMSEIVRGG 400

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 401 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVE 460

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   +   IY  L+  +   +  +  ++
Sbjct: 461 LYFAGNTVATQTYQYFQTFFVIAAIYFVLTFTVTRILRYVERRL 504



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 61/197 (30%), Gaps = 19/197 (9%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G +  T IG ++G  R +            K+  W   VY+EV
Sbjct: 291 WPQFLRGTAITLLISIIGTVVGTFIGLMIGVYRTAPKAANKFVALLQKIFGWFLNVYIEV 350

Query: 136 FRNIPPLVVIFFLYKSVLSVL-PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA------- 187
           FR  P +V    +Y           D ++   F + +N        +     A       
Sbjct: 351 FRGTPMIVQSMVIYYGTAQAFGINIDRTLAAIFIVSINTGAYMSEIVRGGIFAVDKGQFE 410

Query: 188 KIFVFSFVLG-IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 F  G  +  +   ++ R+    TG    +    T ++  +  + L      +  
Sbjct: 411 AATALGFTHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISVVELYFAGNTVAT 470

Query: 247 DKPVLGQFNFIGGSTVS 263
                 Q  F+  +   
Sbjct: 471 QTYQYFQTFFVIAAIYF 487


>gi|242280217|ref|YP_002992346.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123111|gb|ACS80807.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 344

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
             R+S +   A   R + E    + P  V    + + L     P+    L          
Sbjct: 81  LARISYSMKDAGKAREFAEQVVAVYPDNVEAKNFLTSLDRETKPEWQKTLEDCKRFMPNL 140

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L   T+T+       + S + G+ ++L           K  +  P + IS F+I+     
Sbjct: 141 LKGATMTLVLVFFTMIVSPIGGLFIAL----------GKISRMQPFMAISWFIIWFFRGT 190

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+   + +++  P +       G T+SP   +  I L    +A++AEI+R+G+ ++  G
Sbjct: 191 PLLLQLFFIYYGLPAI-------GITLSP-LAAALIGLGINYSAYLAEIIRAGIESIDDG 242

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+T+ +  R V++PQ  + IIPP+ ++++ L+K+++L   +   +L+     
Sbjct: 243 QTEAAKALGMTYGQTMRRVIIPQTYKRIIPPIANEFIALIKDTALVSTIAMVELMRAADQ 302

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + N     + ++++   IYL  + +   F  ++  K+ + E++
Sbjct: 303 MFNAYFN-VTVLVMAAVIYLIFTSVFTFFFEKIEYKVGVYERR 344



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L F  MI + I G  +  G++S  +    I    +  FR  P L+ +FF+
Sbjct: 140 LLKGATMTLVLVFFTMIVSPIGGLFIALGKISRMQPFMAISWFIIWFFRGTPLLLQLFFI 199

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + ++            G+ +N 
Sbjct: 200 YYGLPAIGITLSPLAAALIGLGINY 224


>gi|149003550|ref|ZP_01828424.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
 gi|147758486|gb|EDK65485.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS69]
          Length = 521

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 105/224 (46%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +    + + L    ++ ++  
Sbjct: 290 WQQLLRGAGITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVYIEI 349

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 350 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 399

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 400 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 459

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 460 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|293400689|ref|ZP_06644834.1| amino acid ABC transporter, permease/substrate-binding protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305715|gb|EFE46959.1| amino acid ABC transporter, permease/substrate-binding protein
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 510

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 110/227 (48%), Gaps = 13/227 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +          L          F  VLG  L   A  L +    +  + L   Y+    I
Sbjct: 297 WKIAVRYWPMFLEGLGMTLGLAFVTVLGGTLIGTAFALIKLSKNRFIQLLSSAYVEA--I 354

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L   +           F   ++  P  +S+ +AL   ++A++AEI+R G+
Sbjct: 355 RGTPLLLQLWLFVSI-----------FAAINSDIPMMVSVIVALIINSSAYVAEIIRGGI 403

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V +GQ EAA +LG++++     ++ PQA++SI+P L ++++ ++K +SLA +    +L
Sbjct: 404 LSVDKGQWEAAKSLGMSNQHMMVKIIFPQAIKSILPSLGNEFIMMVKETSLASSFYIGEL 463

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SV   +   T  ++E + I   IYL ++  ++  +  +  ++ + +
Sbjct: 464 MSVNNIVKTATYFSLEPLTIAAIIYLIVTYSLSKLVKYMERRMRVSD 510



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  LAF  ++  T+IGT     +LS N+ +  +   YVE  R  P L+
Sbjct: 302 RYWPMFLEGLGMTLGLAFVTVLGGTLIGTAFALIKLSKNRFIQLLSSAYVEAIRGTPLLL 361

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            ++       ++       + +   + +N
Sbjct: 362 QLWLFVSIFAAINSDIPMMVSVIVALIIN 390


>gi|258540995|ref|YP_003175494.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|257152671|emb|CAR91643.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 482

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 18/232 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F     N  +     T+       +F  ++G +L+L   +LSR++  K    + 
Sbjct: 268 QDQDQGFWAKYGNYFIRGAIYTLVFAVLTVLFGTIIGTLLALM--KLSRNWLAKV---VA 322

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI    I G P LV   + +           F           F++  IA++  + A+
Sbjct: 323 NIYIEF--IRGTPLLVQAFIVF-----------FGTQILGLDLSAFVAGAIAMAINSGAY 369

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ +VP GQ EAA +LGL   +A R V+LPQAM++I P L ++++  +K SS+
Sbjct: 370 VAEIIRGGINSVPVGQTEAARSLGLHQSQAMRYVILPQAMKNIWPALGNEFVTDIKESSV 429

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G  +L+  G  +   + +    +++   +Y  ++  ++  +  +  + 
Sbjct: 430 LSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFLMTFTLSRLLRLIEKRF 481



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T   A   ++  TIIGTL+   +LS N L   +  +Y+E  R  P LV 
Sbjct: 278 YGNYFIRGAIYTLVFAVLTVLFGTIIGTLLALMKLSRNWLAKVVANIYIEFIRGTPLLVQ 337

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 338 AFIVFFGT 345


>gi|171777495|ref|ZP_02919217.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283205|gb|EDT48629.1| hypothetical protein STRINF_00044 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 523

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 17/240 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGK 217
             S        +  +  +           I +   ++G+ + L     R +     K   
Sbjct: 276 QKSNFFTDMWGIFEKNWNQFLRGAGVTLLISIIGTIVGLFIGLLIGVYRTAPKAANKFLA 335

Query: 218 AL-----PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            L      LL +   +  G P +V   + Y                        ++    
Sbjct: 336 GLQKVFGWLLNVYIEIFRGTPMIVQAMVIYYGTAQA----------FGISIDRTLAAIFI 385

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A+++EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++
Sbjct: 386 VSINTGAYMSEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFV 445

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 446 INIKDTSVLNVISVVELYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRFIERRF 505



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            K+  W+  VY+E+
Sbjct: 292 WNQFLRGAGVTLLISIIGTIVGLFIGLLIGVYRTAPKAANKFLAGLQKVFGWLLNVYIEI 351

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 352 FRGTPMIVQAMVIYYGTAQAF 372


>gi|119025595|ref|YP_909440.1| glutamine ABC transporter (binding and transport protein)
           [Bifidobacterium adolescentis ATCC 15703]
 gi|118765179|dbj|BAF39358.1| similar to glutamine ABC transporter (binding and transport
           protein) [Bifidobacterium adolescentis ATCC 15703]
          Length = 501

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + SF + +VL + A  L +    K    L  +YI+ F   G P LV     +  +F
Sbjct: 307 LLITLLSFAIALVLGV-AFGLMKVSESKIAAGLANVYIAVF--RGTPILVW---AFFFYF 360

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L     IG S     +++  + LS  + A++AEIVR  + +V  GQME A +LGL 
Sbjct: 361 GVPQL-----IGHSVNI--WVAGALTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGLN 413

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           HR+A R V+LPQA +  +P + +Q + ++K+SSL +A+GF +L+     +     +  E 
Sbjct: 414 HRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQLYAANFRVTET 473

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +LI   +Y     ++    N ++ K+  
Sbjct: 474 LLIVGVMYFVAITILTWLANIVDRKVNR 501



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 37/77 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +       A ++G   G  ++S +K+ A +  VY+ VFR  P LV  FF
Sbjct: 298 ALLTGLRNTLLITLLSFAIALVLGVAFGLMKVSESKIAAGLANVYIAVFRGTPILVWAFF 357

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  V  ++    +  V
Sbjct: 358 FYFGVPQLIGHSVNIWV 374


>gi|291295431|ref|YP_003506829.1| polar amino acid ABC transporter inner membrane subunit
           [Meiothermus ruber DSM 1279]
 gi|290470390|gb|ADD27809.1| polar amino acid ABC transporter, inner membrane subunit
           [Meiothermus ruber DSM 1279]
          Length = 216

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 72/220 (32%), Positives = 114/220 (51%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F         +I   S V GI+L      L+R    +    L L YI   L+ G P L
Sbjct: 10  LPFLLQGAWVTLRITALSLVFGILLGTLV-ALARMSPLRWLSGLTLGYIE--LLRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I L +   F  P L Q           EF +  IA S  ++A++AEI+R+G+ ++P+G
Sbjct: 67  VQIFLIF---FGIPQLTQ-------QQINEFAAGVIAFSINSSAYVAEILRAGIQSIPKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA++LG +  +  R ++LPQA   +IPPL ++ + LLKNSSL  A+   +L   G  
Sbjct: 117 QREAALSLGFSPTQTLRYIILPQAFTRVIPPLVNEGITLLKNSSLLSAIAVVELTRAGQL 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I  +T +  E+ L    IYL+++++++    RL  +  ++
Sbjct: 177 ISARTFKPFEMYLAVSLIYLTMTLVLSFVARRLERRWQVR 216



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 35/75 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++   ++GTLV   R+S  + ++ +   Y+E+ R  P LV IF +
Sbjct: 13  LLQGAWVTLRITALSLVFGILLGTLVALARMSPLRWLSGLTLGYIELLRGTPLLVQIFLI 72

Query: 149 YKSVLSVLPIPDHSI 163
           +  +  +     +  
Sbjct: 73  FFGIPQLTQQQINEF 87


>gi|168485585|ref|ZP_02710093.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
 gi|183571168|gb|EDT91696.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1087-00]
          Length = 521

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 105/224 (46%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +    + + L    ++ ++  
Sbjct: 290 WQQLLRGAGITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVYIEI 349

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 350 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 399

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 400 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 459

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 460 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|116513356|ref|YP_812262.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116092671|gb|ABJ57824.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 527

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 115/225 (51%), Gaps = 13/225 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALP--LLYISTF 227
                L    +T+  +    +  F +G+++S+  T    ++  +K   A    LL +   
Sbjct: 291 YGQMILEGIGMTLLISLVSTIAGFFIGLLVSIVRTIPEPKNKFKKGLLAFCKWLLSVYVE 350

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V  A+ Y        + QF  I  +      ++  I +S  T A++AE++R 
Sbjct: 351 IFRGTPMMVQAAVIYY------GIAQFWHINLNRT----VAALIIVSINTGAYLAEVIRG 400

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  +K++S+   +  +
Sbjct: 401 GIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNEFIVNIKDTSVLSIISVS 460

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L  VG TI +Q+ Q  +  L+   IYL L+  I    N +   I
Sbjct: 461 ELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEKHI 505



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
           +Y   IL G   T  ++    I    IG LV   R                  W+  VYV
Sbjct: 290 NYGQMILEGIGMTLLISLVSTIAGFFIGLLVSIVRTIPEPKNKFKKGLLAFCKWLLSVYV 349

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 350 EIFRGTPMMVQAAVIYYGIAQFWH 373


>gi|304440010|ref|ZP_07399903.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371502|gb|EFM25115.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 556

 Score =  166 bits (421), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 17/225 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----RLSRHFHEKTGKALPLLYISTFL 228
             +     T+  +    V   VLG+++ +  T     +  ++F     K L  +Y+   +
Sbjct: 326 NFIRGTGYTVLISFVGTVLGLVLGLIVGIIRTIPESLKKGKNFVLNIFKVLANIYVQ--V 383

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P +V   L Y        L QF  I  S +     + ++ +S  T A+++E+VR G
Sbjct: 384 LRGTPMIVQSVLVYF------GLLQFAGINLSPMQ----AAFLVVSVNTGAYLSEVVRGG 433

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ +GQ EAA +LG+ H +    V+LPQA+++IIP + ++++  +K++S+   +   +
Sbjct: 434 INSIDKGQFEAARSLGMNHYQTMVHVVLPQAIKNIIPAIGNEFIVNIKDTSVLNVIAVNE 493

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L     +I+       E  LI   IYL+L++ IA F++ +   +A
Sbjct: 494 LFFTTKSIVGGNLMYFETYLITSIIYLTLTLSIAYFLHFVERLLA 538


>gi|212716937|ref|ZP_03325065.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660222|gb|EEB20797.1| hypothetical protein BIFCAT_01881 [Bifidobacterium catenulatum DSM
           16992]
          Length = 517

 Score =  166 bits (421), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + SF + +VL + A  L +    K  + +  +YI+ F   G P LV     +  +F
Sbjct: 323 LLITLLSFAIALVLGV-AFGLMKVSENKILEGIAKVYIAVF--RGTPILVW---AFFFYF 376

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L     IG S     +++  + LS  + A++AEIVR  + +V  GQME A +LGL 
Sbjct: 377 GVPQL-----IGHSVNI--WVAGALTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGLN 429

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H +A   V++PQA    +P + +Q + ++K+SSL +A+GF +L+     +     +  E 
Sbjct: 430 HHQAMARVIMPQAAAIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQLYAANFRVTET 489

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +LI   +Y     ++    N ++ K+  
Sbjct: 490 LLIVGVMYFVAITILTWLANIVDRKVNR 517



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 38/77 (49%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +       A ++G   G  ++S NK++  I +VY+ VFR  P LV  FF
Sbjct: 314 ALLTGLKNTLLITLLSFAIALVLGVAFGLMKVSENKILEGIAKVYIAVFRGTPILVWAFF 373

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  V  ++    +  V
Sbjct: 374 FYFGVPQLIGHSVNIWV 390


>gi|225352760|ref|ZP_03743783.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156367|gb|EEG69936.1| hypothetical protein BIFPSEUDO_04390 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 517

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + SFV+ + L + A  L +    K  + +  +YI+ F   G P LV     +  +F
Sbjct: 323 LLITLLSFVIALALGV-AFGLMKVSENKILRGVSKVYIAVF--RGTPILVW---AFFFYF 376

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L     IG S     +++  + LS  + A++AEIVR  + +V  GQME A +LGL 
Sbjct: 377 GVPQL-----IGHSVNI--WVAGALTLSLNSGAYLAEIVRGAVQSVDSGQMEGARSLGLN 429

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H +A   V++PQA    +P + +Q + ++K+SSL +A+GF +L+     +     +  E 
Sbjct: 430 HHQAMARVIMPQATAIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQLYAANFRVTET 489

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +LI   +Y     ++    N ++ K+  
Sbjct: 490 LLIVGVMYFVAITILTWLANIVDRKVNR 517



 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 38/77 (49%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +     + A  +G   G  ++S NK++  + +VY+ VFR  P LV  FF
Sbjct: 314 ALLTGLKNTLLITLLSFVIALALGVAFGLMKVSENKILRGVSKVYIAVFRGTPILVWAFF 373

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  V  ++    +  V
Sbjct: 374 FYFGVPQLIGHSVNIWV 390


>gi|260889042|ref|ZP_05900305.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Leptotrichia hofstadii F0254]
 gi|260861102|gb|EEX75602.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Leptotrichia hofstadii F0254]
          Length = 521

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 113/258 (43%), Gaps = 25/258 (9%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI----FVFSFVLGIVLSLF 203
           + +  +   P         + +F              +   I     V  F +G++++L 
Sbjct: 259 IMEKSIQNQPNEASRSFFGWVIFFIKNNWMTFVKGTVSTLYISITGTVVGFFIGLLVALL 318

Query: 204 ATRLS---------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
               +         +    K    L  +YI+ F   G P +V   + Y            
Sbjct: 319 RYSEAEIDGQSHKYKKTGLKFLNWLSSIYIAVF--RGTPMIVQSMVIYY---------GL 367

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           + +    +SP   +L+I +S  T A+++EI+R G+ ++  GQ EAA A+G+T+ +  + +
Sbjct: 368 SQVFHINLSPMVAALFI-VSINTGAYMSEIIRGGIDSIDNGQFEAAKAIGMTNFQLMQSI 426

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQ  R+I+P + ++ +  +K++S+   +   +L  +  +++    +  E+ +I   IY
Sbjct: 427 IFPQMFRNILPMIGNELIVNIKDTSVLNVISVTELFFISNSVVGTYSRYYEVFIITSVIY 486

Query: 375 LSLSIMIALFMNRLNAKI 392
             L+  ++L + ++  +I
Sbjct: 487 FFLTFTLSLILKQIEKRI 504



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 14/98 (14%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN--------------KLVAWICRV 131
               + G V+T +++ +G +    IG LV   R S                K + W+  +
Sbjct: 287 WMTFVKGTVSTLYISITGTVVGFFIGLLVALLRYSEAEIDGQSHKYKKTGLKFLNWLSSI 346

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           Y+ VFR  P +V    +Y  +  V  I    +V    +
Sbjct: 347 YIAVFRGTPMIVQSMVIYYGLSQVFHINLSPMVAALFI 384


>gi|111225333|ref|YP_716127.1| amino acid ABC transporter membrane protein [Frankia alni ACN14a]
 gi|111152865|emb|CAJ64612.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Frankia alni ACN14a]
          Length = 333

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 14/266 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    +V++      V S++  P                L     T+           V 
Sbjct: 66  RWAAGVVILVLAAMGVHSLVTNPHFQWGTVGDYLFAEPVLRGLWATVYLTVIAMAIGIVG 125

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKP 249
           GIVL++      R            LYI  F   G P LV I            L    P
Sbjct: 126 GIVLAIL-----RMSPNPVVAGAAWLYIWFF--RGTPLLVQILFWSFVGALYPRLSLGIP 178

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F     + + P F +  + L    AA++AEIVR+G+  V  GQ EAA ALG++   
Sbjct: 179 FGPSFVSGDANHIVPLFAAAVLGLGLNEAAYMAEIVRAGINGVDAGQTEAASALGMSRAL 238

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R ++LPQAMR+IIPP  ++ +++LK +SL   + + +L++    +  +T Q I ++++
Sbjct: 239 ALRRIVLPQAMRTIIPPTGNETISMLKTTSLVSVISYNELLNATRIVYARTFQTIPLLIV 298

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               YL+L+ ++ L  ++L  + A  
Sbjct: 299 AALWYLALTSVLTLGQHQLERRFARG 324



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 27/63 (42%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T +L    M    + G ++   R+S N +VA    +Y+  FR  P LV I F  
Sbjct: 105 LRGLWATVYLTVIAMAIGIVGGIVLAILRMSPNPVVAGAAWLYIWFFRGTPLLVQILFWS 164

Query: 150 KSV 152
              
Sbjct: 165 FVG 167


>gi|238855887|ref|ZP_04646176.1| amino acid ABC transporter permease protein [Lactobacillus jensenii
           269-3]
 gi|282931561|ref|ZP_06337058.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|238831550|gb|EEQ23898.1| amino acid ABC transporter permease protein [Lactobacillus jensenii
           269-3]
 gi|281304317|gb|EFA96422.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
          Length = 534

 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 17/246 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----R 206
             S       +  +       +  L+   +T+       +  F +G+V+ +  T      
Sbjct: 276 QPSTDSDKKTNWFVSTWNTYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVIRTIPTPTS 335

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L   +  K    L  +Y+  F   G P +V  A+ Y        + QF  +  +      
Sbjct: 336 LLNRWLLKVVNFLLSVYVEVF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT---- 383

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  + +S  T A++AE++R G++A P+GQ EAA ALG+TH +    ++LPQA+++ +P 
Sbjct: 384 VAALVIVSINTGAYLAEVIRGGIMATPKGQFEAASALGMTHNQRMWNIILPQAIKNCLPS 443

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +T++++  +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N
Sbjct: 444 ITNEFIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLMISAIYLVLTFSITRIFN 503

Query: 387 RLNAKI 392
            +  K+
Sbjct: 504 LIEKKL 509



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYV 133
           +Y + IL G   T  LA  G I    IG +VG  R              K+V ++  VYV
Sbjct: 294 TYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVIRTIPTPTSLLNRWLLKVVNFLLSVYV 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +     
Sbjct: 354 EVFRGTPMMVQAAVIYYGIAQFWH 377


>gi|332180369|gb|AEE16057.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 230

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 8/229 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
           +N   LS         AK  +   ++ + L         + R    +  + L   Y+   
Sbjct: 1   MNFSFLSRYWSFYLIGAKNTILLSLIAVALGTCFGMLLAMCRISKNRGLRFLGTAYVEF- 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            I G P LV + + Y       +      F          +FMS  I +   +AA++ EI
Sbjct: 60  -IRGTPLLVQLFIIYYGLQAIGIRFPDVPFMTALLGINFSDFMSGVITMGMNSAAYVCEI 118

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+ +V +GQ EA  +LGL++ +    +++PQA+R+++P L ++++ ++K SS+   +
Sbjct: 119 FRSGIQSVDKGQTEAGRSLGLSYPRTLAHIIIPQAVRNVLPALGNEFVVVIKESSIVSII 178

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G ADL+    T+   T Q  E +L+   +Y  ++  ++  + R+  ++ 
Sbjct: 179 GIADLMYKANTVRGNTFQPFEPLLVAAVVYFLMTFPLSKLLARIEKRMR 227



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 50/113 (44%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++  S Y +  L+G  NT  L+   +   T  G L+   R+S N+ + ++   YVE  R 
Sbjct: 3   FSFLSRYWSFYLIGAKNTILLSLIAVALGTCFGMLLAMCRISKNRGLRFLGTAYVEFIRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
            P LV +F +Y  + ++         +   + +N        +TM  N+  +V
Sbjct: 63  TPLLVQLFIIYYGLQAIGIRFPDVPFMTALLGINFSDFMSGVITMGMNSAAYV 115


>gi|325525581|gb|EGD03370.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 500

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                     +  +        + +  +   ++   +LG  ++L     +R  H    K 
Sbjct: 1   MQFDWHYALQLLWDKDFWRACVVVVKLSVSAWLLGVLLGFPVAL-----ARQSHHAALKR 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +  +YI  F    LP LVL+   Y L    P          + +S  F +  IA+     
Sbjct: 56  VAAVYIWFF--RSLPLLVLLVFIYNLPQVFPA-------TSAVLSDPFTAGLIAMVLSET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R G+++VPRGQ+EA  ALG+      R++++PQA+R  +P L ++++ ++K +
Sbjct: 107 AYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQAIRIALPALANEFITIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q     E +L   F Y+ +  + +  +  L   + +  +
Sbjct: 167 SLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLLAYLERHLDVSRR 225



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 8/205 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y     +        V    L+ S  +   ++G  V   R S +  +  +  VY+  FR
Sbjct: 6   HYALQLLWDKDFWRACVVVVKLSVSAWLLGVLLGFPVALARQSHHAALKRVAAVYIWFFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---- 193
           ++P LV++ F+Y  +  V P     +  PF   L    LS      + +    +      
Sbjct: 66  SLPLLVLLVFIYN-LPQVFPATSAVLSDPFTAGLIAMVLSETAYFAEIHRGGILSVPRGQ 124

Query: 194 FVLGIVLSLFATRLSRHF--HEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250
              G  L +  T + R     +    ALP L      I  L +LV +I+L   L   + +
Sbjct: 125 LEAGRALGIRFTGIQRMIVMPQAIRIALPALANEFITIVKLTSLVSVISLAEILLVGQRL 184

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSC 275
             Q   +  + ++  F  + I    
Sbjct: 185 YTQNFLVFETMLAVAFYYVLIVTVF 209


>gi|239630683|ref|ZP_04673714.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526966|gb|EEQ65967.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 485

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 18/232 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F     N  L     T+        F  V+G +L+L      +  H    KA+ 
Sbjct: 271 QDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFGTVIGTLLALM-----KLSHSWFAKAIA 325

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI    I G P LV   + +           F           F++  IA++  + A+
Sbjct: 326 NVYIEF--IRGTPLLVQAFIVF-----------FGTQILGLDLSAFVAGAIAMAINSGAY 372

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ +VP GQ EAA +LGL   +A R V+LPQA ++I P L ++++  +K SS+
Sbjct: 373 VAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQATKNIWPALGNEFVTDIKESSV 432

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G  +L+  G  +   + +    +++   +Y  ++  ++  +  +  + 
Sbjct: 433 LSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMTFTLSRLLRLIEKRF 484



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G + T   A   +   T+IGTL+   +LS +     I  VY+E  R  P LV 
Sbjct: 281 YGNYFLRGALYTLIFAVLTVFFGTVIGTLLALMKLSHSWFAKAIANVYIEFIRGTPLLVQ 340

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 341 AFIVFFGT 348


>gi|256851769|ref|ZP_05557157.1| ABC transporter permease component [Lactobacillus jensenii
           27-2-CHN]
 gi|260661514|ref|ZP_05862426.1| ABC transporter permease component [Lactobacillus jensenii
           115-3-CHN]
 gi|282931983|ref|ZP_06337446.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|297205391|ref|ZP_06922787.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|256615727|gb|EEU20916.1| ABC transporter permease component [Lactobacillus jensenii
           27-2-CHN]
 gi|260547571|gb|EEX23549.1| ABC transporter permease component [Lactobacillus jensenii
           115-3-CHN]
 gi|281303889|gb|EFA96028.1| amino acid ABC transporter, permease protein [Lactobacillus
           jensenii 208-1]
 gi|297149969|gb|EFH30266.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 534

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 121/254 (47%), Gaps = 17/254 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++    K   +       +  +       +  L+   +T+       +  F +G+V+ + 
Sbjct: 268 LMATAVKEQPTTDNDKKTNWFVSTWNTYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVI 327

Query: 204 AT-----RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            T      L   +  K    L  +Y+  F   G P +V  A+ Y        + QF  + 
Sbjct: 328 RTIPTPTSLLNRWLLKVVNFLLSVYVEVF--RGTPMMVQAAVIYY------GIAQFWHLN 379

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            +      ++  I +S  T A++AE++R G++A P+GQ EAA ALG++H +    ++LPQ
Sbjct: 380 LNRT----VAALIIVSINTGAYLAEVIRGGIMATPKGQFEAASALGMSHNQRMWNIILPQ 435

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+++ +P +T++++  +K++S+   +  ++L  VG TI +Q+ +  +  L+   IYL L+
Sbjct: 436 AIKNCLPSITNEFIVNIKDTSVLSIISVSELFFVGSTIASQSFEFFQTYLMISAIYLMLT 495

Query: 379 IMIALFMNRLNAKI 392
             I    N +  K+
Sbjct: 496 FSITRIFNLIEKKL 509



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
           +Y + IL G   T  LA  G I    IG +VG  R               +V ++  VYV
Sbjct: 294 TYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVIRTIPTPTSLLNRWLLKVVNFLLSVYV 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +     
Sbjct: 354 EVFRGTPMMVQAAVIYYGIAQFWH 377


>gi|260665023|ref|ZP_05865873.1| ABC transporter permease component [Lactobacillus jensenii
           SJ-7A-US]
 gi|260561077|gb|EEX27051.1| ABC transporter permease component [Lactobacillus jensenii
           SJ-7A-US]
          Length = 534

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 17/246 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----R 206
             S       +  +       +  L+   +T+       +  F +G+V+ +  T      
Sbjct: 276 QPSTDSDKKTNWFVSTWNTYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVIRTIPTPTS 335

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L   +  K    L  +Y+  F   G P +V  A+ Y        + QF  +  +      
Sbjct: 336 LLNRWLLKVVNFLLSVYVEVF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT---- 383

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  + +S  T A++AE++R G++A P+GQ EAA ALG+TH +    ++LPQA+++ +P 
Sbjct: 384 VAALVIVSINTGAYLAEVIRGGIMATPKGQFEAASALGMTHNQRMWNIILPQAIKNCLPS 443

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +T++++  +K++S+   +  ++L  VG TI +Q+ Q  +  L+   IYL L+  I    N
Sbjct: 444 ITNEFIVNIKDTSVLSIISVSELFFVGSTIASQSFQFFQTYLMISAIYLVLTFSITRIFN 503

Query: 387 RLNAKI 392
            +  K+
Sbjct: 504 LIEKKL 509



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYV 133
           +Y + IL G   T  LA  G I    IG +VG  R              K+V ++  VYV
Sbjct: 294 TYGSMILAGVGMTLLLALVGTIAGFFIGLVVGVIRTIPTPTSLLNRWLLKVVNFLLSVYV 353

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           EVFR  P +V    +Y  +     
Sbjct: 354 EVFRGTPMMVQAAVIYYGIAQFWH 377


>gi|6706991|gb|AAF25532.1|AF104994_2 permease [Streptomyces coelicolor A3(2)]
          Length = 313

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 4/234 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +G   +          M     I V + ++G+V  +    + R        ++   YI
Sbjct: 56  INWGAIPDYFFDDRVLTGMGKTLLITVLAMLIGVVGGILL-AVMRLSKNPVTSSIAWFYI 114

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV +     L F+   LG F     S     F++  + L    AA++AEI
Sbjct: 115 WFF--RGTPQLV-VWFNLGLVFEYINLGPFYRDEWSDFMTPFLTALLGLGLNEAAYMAEI 171

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL+AV  GQ EAA ALG++H K  R +++PQAMR I+PP  ++ +N+LK +SL   V
Sbjct: 172 CRAGLLAVDEGQTEAAHALGMSHTKTLRRIVVPQAMRVIVPPTGNEVINMLKTTSLVSVV 231

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +A+L  V   I   +G   E++ +    YL L+ + ++    L    A    +
Sbjct: 232 QYAELFRVAQDIGQTSGAPAEMLFLAAAWYLLLTSVFSVGQYYLERYYARGSSR 285



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 2/131 (1%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     +L G   T  +    M+   + G L+   RLS N + + 
Sbjct: 49  YAFSQGKINWGAIPDYFFDDRVLTGMGKTLLITVLAMLIGVVGGILLAVMRLSKNPVTSS 108

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I   Y+  FR  P LVV F L      +   P +       M      L    L      
Sbjct: 109 IAWFYIWFFRGTPQLVVWFNLGLVFEYINLGPFYRDEWSDFMTPFLTALLGLGLNEAAYM 168

Query: 188 KIFVFSFVLGI 198
                + +L +
Sbjct: 169 AEICRAGLLAV 179


>gi|302539757|ref|ZP_07292099.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302457375|gb|EFL20468.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces himastatinicus ATCC 53653]
          Length = 316

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 14/267 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  +VV F L   +   +  P            +   +     T+   A       V G+
Sbjct: 34  VAAVVVTFLLVFLLEGWITNPRMQWGTVGEFLFSPVIMEGLRTTLLLTALAMAVGIVGGV 93

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKPVL 251
           VL++      R         L   YI  F   G P LV +   Y L           P  
Sbjct: 94  VLAVL-----RMSANPVLSRLSWAYIWLF--RGTPLLVQLLFWYFLSAIVPTIGLGVPWG 146

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F     + +  +  +  + L  + AA++AEIVR+G+ +V  GQ EAA ALG++  +  
Sbjct: 147 PTFVEAETNVLITQLTAAVLGLGLHEAAYMAEIVRAGITSVDDGQSEAAQALGMSRGQTL 206

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA+R IIPP  +Q +++LK +SL  A+   +L++    I ++  Q + ++++  
Sbjct: 207 RRIVLPQALRIIIPPTGNQAISMLKTTSLVFAIAVPELLTSIQGIYSRNFQQVPLLVVAC 266

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
           F YL  + ++ +    L  +      +
Sbjct: 267 FWYLVATSVLNVGQYYLERRFGRGTSR 293



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 28/167 (16%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           Q + A+++T + ++ +     N      ++G  FL                        I
Sbjct: 32  QRVAAVVVTFLLVFLLEGWITNPRMQWGTVG-EFLFSP--------------------VI 70

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    M    + G ++   R+SAN +++ +   Y+ +FR  P LV + F Y
Sbjct: 71  MEGLRTTLLLTALAMAVGIVGGVVLAVLRMSANPVLSRLSWAYIWLFRGTPLLVQLLFWY 130

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                V         +  G+      +   T  + T     V    L
Sbjct: 131 FLSAIVP-------TIGLGVPWGPTFVEAETNVLITQLTAAVLGLGL 170


>gi|258406609|ref|YP_003199351.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798836|gb|ACV69773.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 335

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 109/208 (52%), Gaps = 5/208 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V + +LGIVL +    LSR       +   + YI   +I G P LV I L Y 
Sbjct: 131 WITLKVSVVAIILGIVLGVLTG-LSRISSNPALRWSAITYIE--IIRGSPLLVQIFLWYF 187

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     ++       G           I+L+ +T A++AEIVR+G+ +V RGQMEAA +L
Sbjct: 188 V--IGTLVNSILAQNGLGQISPLWFGIISLAVFTGAYVAEIVRAGIQSVSRGQMEAARSL 245

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ ++ R V+LPQA + I+P L  Q+++L+K+SSL   +   +L      ++  + Q 
Sbjct: 246 GMTYTQSMRKVILPQAFKRILPALAGQFISLIKDSSLLGVISVRELTKATREVVTSSLQP 305

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E+ +    +YL L+  ++L +  +  K
Sbjct: 306 FELWITCAVLYLLLTFTLSLVVQYIERK 333



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +I   ++G L G  R+S+N  + W    Y+E+ R  P LV IF  
Sbjct: 126 LLQGLWITLKVSVVAIILGIVLGVLTGLSRISSNPALRWSAITYIEIIRGSPLLVQIFLW 185

Query: 149 YKSV 152
           Y  +
Sbjct: 186 YFVI 189


>gi|313894837|ref|ZP_07828397.1| glutamine ABC transporter, permease protein GlnP [Selenomonas sp.
           oral taxon 137 str. F0430]
 gi|312976518|gb|EFR41973.1| glutamine ABC transporter, permease protein GlnP [Selenomonas sp.
           oral taxon 137 str. F0430]
          Length = 219

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 13/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I V S  +G ++ L    ++R    K  + L  +Y+  F   G P LV I L Y  
Sbjct: 21  VTIQITVLSTTIGFIVGLIV-AVARISKLKPLRMLAEVYVEFF--RGTPLLVQIFLFY-- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PV      I G  + P F++   A    + A++AEI R+G+ +V  GQMEA  +LG
Sbjct: 76  -FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDAGQMEAGRSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G  II +T  ++
Sbjct: 128 MTWIQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKTYGSM 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI L    IYL++++ I+  +  L  +  + +
Sbjct: 188 EIWLSVAVIYLAMTLTISRLVAYLERRYRVND 219



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  +         I+G +V   R+S  K +  +  VYVE FR  P LV IF  
Sbjct: 15  LLVGAGVTIQITVLSTTIGFIVGLIVAVARISKLKPLRMLAEVYVEFFRGTPLLVQIFLF 74

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 75  YFALP 79


>gi|331670095|ref|ZP_08370940.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA271]
 gi|331063008|gb|EGI34922.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA271]
          Length = 203

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 103/203 (50%), Positives = 139/203 (68%), Gaps = 1/203 (0%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + IVLS+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FN
Sbjct: 1   MAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 60

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V+
Sbjct: 61  FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 120

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           +PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I + M +Y
Sbjct: 121 IPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 180

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L +S+ I+L MN  N +IA+ E+
Sbjct: 181 LIISLTISLLMNIYNRRIAIVER 203


>gi|149012202|ref|ZP_01833311.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
 gi|147763804|gb|EDK70738.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP19-BS75]
          Length = 521

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +      + L    ++ ++  
Sbjct: 290 WQQLLRGAGITLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEI 349

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 350 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 399

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 400 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 459

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 460 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|227532776|ref|ZP_03962825.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189610|gb|EEI69677.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 482

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 18/232 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F     N  L     T+        F  V+G +L+L      +  H    KA+ 
Sbjct: 268 QDQNQSFWAKYGNYFLRGTLYTLIFAVLTVFFGTVIGTLLALM-----KLSHSWFAKAIA 322

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI    I G P LV   + +           F           F++  IA++  + A+
Sbjct: 323 NVYIEF--IRGTPLLVQAFIVF-----------FGTQILGLDLSAFVAGAIAMAINSGAY 369

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ +VP GQ EAA +LGL   +A R V+LPQA ++I P L ++++  +K SS+
Sbjct: 370 VAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQATKNIWPALGNEFVTDIKESSV 429

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G  +L+  G  +   + +    +++   +Y  ++  ++  +  +  + 
Sbjct: 430 LSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMTFTLSRLLRLIEKRF 481



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G + T   A   +   T+IGTL+   +LS +     I  VY+E  R  P LV 
Sbjct: 278 YGNYFLRGTLYTLIFAVLTVFFGTVIGTLLALMKLSHSWFAKAIANVYIEFIRGTPLLVQ 337

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 338 AFIVFFGT 345


>gi|256545654|ref|ZP_05473011.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Anaerococcus vaginalis
           ATCC 51170]
 gi|256398630|gb|EEU12250.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Anaerococcus vaginalis
           ATCC 51170]
          Length = 520

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALP 220
               ++  ++    T+  +    +  FV+G+++++           +  +  +K    + 
Sbjct: 285 WSEYSSLFINGIFSTLFISIISTLIGFVIGLIVAVIRKIKVDKNKNIFAYILQKIVNFIL 344

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI  F   G P +V   L +          QF  I  ST+    ++ +I +S  T A+
Sbjct: 345 VCYIEVF--RGTPMMVQAILIFYGA------KQFLSIDMSTM----LAAFIIVSINTGAY 392

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E+VR G+ +V  GQ EA  ALG+TH +    V++PQ ++SI+P + ++++  +K++S+
Sbjct: 393 LSEVVRGGINSVDEGQFEACKALGMTHSQTMFNVVIPQTIKSILPAIANEFVVNIKDTSV 452

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   +L  V  +I   T Q  +  LI   IY  L+ +    +  +  K   KE
Sbjct: 453 LNVISVTELFFVSKSIAGSTYQIFQTYLITAIIYFILTFITTRIILLIEKKFTNKE 508



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 12/85 (14%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICR 130
           S Y++  + G  +T +++    +   +IG +V   R                K+V +I  
Sbjct: 286 SEYSSLFINGIFSTLFISIISTLIGFVIGLIVAVIRKIKVDKNKNIFAYILQKIVNFILV 345

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSV 155
            Y+EVFR  P +V    ++      
Sbjct: 346 CYIEVFRGTPMMVQAILIFYGAKQF 370


>gi|323698008|ref|ZP_08109920.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457940|gb|EGB13805.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 237

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 11/223 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L    +T+            LGI+      R+SR    +    +  +YI   +I 
Sbjct: 9   HQDMLLHGAWITLQVTFGALALGLFLGILAG--TGRISRRVQIRV---IADVYIQ--VIR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ I   Y      P L       G T  P  ++  +AL   + A+ AEI+R+G+ 
Sbjct: 62  GTPMLLQIFFFY---LGFPQLYMLATGDGFTPDP-LITGIVALGINSGAYNAEIIRAGIQ 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQMEAA + GL+H +A   V+LPQA++ +IPPL ++ + LLK+SSL   +G A+L+
Sbjct: 118 SINKGQMEAARSTGLSHTQAMFHVILPQALKRMIPPLGNELIVLLKDSSLISTIGVAELM 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                +  +    +  ++    IYL L+   +   N L  K++
Sbjct: 178 FTAKVLGARYYTYVPFLVGVGCIYLVLTFGFSRLFNALERKLS 220



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 39/100 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    +   +L G   T  + F  +     +G L G GR+S    +  I  VY++V 
Sbjct: 1   MDFSLLFKHQDMLLHGAWITLQVTFGALALGLFLGILAGTGRISRRVQIRVIADVYIQVI 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           R  P L+ IFF Y     +  +       P  +      L
Sbjct: 61  RGTPMLLQIFFFYLGFPQLYMLATGDGFTPDPLITGIVAL 100


>gi|313648622|gb|EFS13063.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella flexneri 2a str. 2457T]
          Length = 203

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 102/203 (50%), Positives = 138/203 (67%), Gaps = 1/203 (0%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + IVLS+   R ++ +  KTG+      I+  LI GLP L        LH+D P L  FN
Sbjct: 1   MAIVLSVGLFRFNKTYQIKTGQLRRSWPIAAVLIIGLPLLAQWLFGAALHWDVPALQGFN 60

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL +    R V+
Sbjct: 61  FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNPVTLRQVI 120

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEIILIWMFIY 374
           +PQA+R IIPPLTSQYLN++KNSSLA  +G+ D+VS+  GT++NQTGQAIE I + M +Y
Sbjct: 121 IPQALRVIIPPLTSQYLNIVKNSSLAAVIGYPDMVSLFAGTVLNQTGQAIETIAMTMSVY 180

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L +S+ I+L MN  N +IA+ E+
Sbjct: 181 LIISLTISLLMNIYNRRIAIVER 203


>gi|302518222|ref|ZP_07270564.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
 gi|302427117|gb|EFK98932.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
          Length = 334

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           + I  L V+  L  +V S+         +    F  +  L    LT+   A + V  FVL
Sbjct: 72  QWIAALFVLLLLAMAVNSLARNKAFQWDVVADYFTTSAVLRGLGLTLWLTALVMVLGFVL 131

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKP 249
           G +L+L      R         +   YI  F     P LV +   +        L    P
Sbjct: 132 GTLLAL-----GRMSSNPVLSWVSSGYIWFF--RSTPILVQLLFWFNIGALYPRLGLGIP 184

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              +F  +    +        + L+ + AA+ AE+VR GL++V RGQ+EAA +LGL+  +
Sbjct: 185 FGPEFVTVKTVNLLGPVTVAVLGLTLHEAAYAAEVVRGGLLSVDRGQIEAAQSLGLSPWR 244

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQAMR+I+PP  +  +  LK +S+   +   DL+     + ++T Q I ++L+
Sbjct: 245 RLRRIVLPQAMRAIVPPAGNMLIGALKGTSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLV 304

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y  ++ ++++  + +    A   ++
Sbjct: 305 ATIWYALVTSVLSVGQHYVEKHYARGAER 333



 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 37/65 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T WL    M+   ++GTL+  GR+S+N +++W+   Y+  FR+ P LV + F
Sbjct: 109 AVLRGLGLTLWLTALVMVLGFVLGTLLALGRMSSNPVLSWVSSGYIWFFRSTPILVQLLF 168

Query: 148 LYKSV 152
            +   
Sbjct: 169 WFNIG 173


>gi|302528609|ref|ZP_07280951.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
 gi|302437504|gb|EFL09320.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
          Length = 298

 Score =  165 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 12/263 (4%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLS 201
            + +   +VL+ + +        FG  +    L    +        ++ V +  +GIVL 
Sbjct: 23  WVTYAVAAVLAAMFVHTLLTNKNFGWDIVGNYLGSGEILAGLGKTIELTVLAMAIGIVLG 82

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKPVLGQF 254
           +    + R       K    LYI  F   G P  V +            L    P   QF
Sbjct: 83  VVL-AVMRLSANPAMKGFASLYIWFF--RGTPVFVQLLFWGYASALYPRLGIGIPFGPQF 139

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                + +   F++  + L     A++AE+VR+G+++V RGQ EAA ALG++  +  R V
Sbjct: 140 VSAPTNVLITPFIAAILGLGLNEGAYMAEVVRAGILSVDRGQTEAAQALGMSRLRTLRRV 199

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQAMR IIPP  +Q + +LK +SL   + F +L+     + +   + I +++     Y
Sbjct: 200 VLPQAMRVIIPPTGNQVITMLKTTSLVSVLAFPELLYSAQLVYSTNFKTIPLLITASLWY 259

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L  + ++ +  + L  + +  E+
Sbjct: 260 LLTTSVLNVGQHFLERRFSRSER 282



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 40/113 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L    M    ++G ++   RLSAN  +     +Y+  FR  P  V + F 
Sbjct: 60  ILAGLGKTIELTVLAMAIGIVLGVVLAVMRLSANPAMKGFASLYIWFFRGTPVFVQLLFW 119

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
             +      +       P  +      L  P +       +   +++  +V +
Sbjct: 120 GYASALYPRLGIGIPFGPQFVSAPTNVLITPFIAAILGLGLNEGAYMAEVVRA 172


>gi|308178222|ref|YP_003917628.1| polar amino acid ABC transporter inner membrane and binding protein
           subunit [Arthrobacter arilaitensis Re117]
 gi|307745685|emb|CBT76657.1| polar amino acid ABC transporter, inner membrane and binding
           protein subunit [Arthrobacter arilaitensis Re117]
          Length = 489

 Score =  165 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 98/242 (40%), Gaps = 18/242 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT-NAKIFVFSFVLGIVLSLFATRLSRH 210
                P           +  +   L           A  F  +  LG+V         + 
Sbjct: 263 SYLADPTASTPGNFFDLLVKSMPALMTGLWHTLLVTAISFAIAMALGLVFGFM-----KI 317

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 + +   +++ F         L+   +  +F  P L  +           + +  
Sbjct: 318 SGNIVLRGIATTFVNIFRGTP-----LLLWAFMFYFGLPQLTGWEI-------SVWTAGV 365

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS    A++AEIVR G+ +V  GQ+EA+ +LGL + K+ + V++PQA + + P L +Q
Sbjct: 366 LTLSLNAGAYVAEIVRGGIQSVDPGQLEASRSLGLGYGKSMQKVVIPQAFKMMTPSLINQ 425

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  LK+SSL +A+GF +L+  G  I     +  E +LI   IY    + +    N  + 
Sbjct: 426 LIISLKDSSLLLAIGFTELLYQGQQIYAANFRVTETLLIVGIIYFIAIMALTKLANYADR 485

Query: 391 KI 392
           + 
Sbjct: 486 RF 487



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A++ G  +T  +       A  +G + G  ++S N ++  I   +V +FR  P L+  F 
Sbjct: 286 ALMTGLWHTLLVTAISFAIAMALGLVFGFMKISGNIVLRGIATTFVNIFRGTPLLLWAFM 345

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  +  +         
Sbjct: 346 FYFGLPQLTGWEISVWT 362


>gi|291616399|ref|YP_003519141.1| GlnQ [Pantoea ananatis LMG 20103]
 gi|291151429|gb|ADD76013.1| GlnQ [Pantoea ananatis LMG 20103]
 gi|327392843|dbj|BAK10265.1| glutamine transport ATP-binding protein GlnQ GlnQ [Pantoea ananatis
           AJ13355]
          Length = 519

 Score =  165 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 14/247 (5%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           + +V      +    F +F +          +  +   +  S + G +L+L     ++  
Sbjct: 6   LFNVSKPMTFNWNYMFSLFSDANFWLATWTVIKLSLLTWGMSIIAGFILAL-----AKQS 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                      YI  F    LP LVL+   Y L    P          + +S  F + +I
Sbjct: 61  RHPLLTLPARFYIWLF--RSLPLLVLLIFVYNLPQAVPA-------TSAILSDPFWAGFI 111

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+   +A+IAEI R GL+++PRGQ EAA ALGL +      +++PQA+R  +P L ++Y
Sbjct: 112 ALTICESAYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQWRIIIPQALRVALPALANEY 171

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + ++K +SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + +L   
Sbjct: 172 IAIVKLTSLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVLIVTVFDFLLKQLERY 231

Query: 392 IALKEKK 398
           + + +++
Sbjct: 232 LDVTQRQ 238



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 12/196 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             +       L+      + I G ++   + S + L+    R Y+ +FR++P LV++ F+
Sbjct: 29  FWLATWTVIKLSLLTWGMSIIAGFILALAKQSRHPLLTLPARFYIWLFRSLPLLVLLIFV 88

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVL 200
           Y  +   +P     +  PF        +       + +    +         +  LG+  
Sbjct: 89  YN-LPQAVPATSAILSDPFWAGFIALTICESAYIAEIHRGGLLSIPRGQSEAARALGLRY 147

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGG 259
           +    R+      +   ALP L      I  L +LV +I+L   L   + +  Q   +  
Sbjct: 148 AGIQWRIIIPQALRV--ALPALANEYIAIVKLTSLVSVISLTEILMVGQRLYSQNFLVME 205

Query: 260 STVSPEFMSLYIALSC 275
           +  +  F  + I    
Sbjct: 206 TMAAVAFYYVLIVTVF 221


>gi|212704997|ref|ZP_03313125.1| hypothetical protein DESPIG_03065 [Desulfovibrio piger ATCC 29098]
 gi|212671549|gb|EEB32032.1| hypothetical protein DESPIG_03065 [Desulfovibrio piger ATCC 29098]
          Length = 266

 Score =  165 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 15/231 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  +    + F    +    K+  +S    + L L    L R    +    L   Y+   
Sbjct: 50  GPQVYRDAIIFLPDGLLLTFKVTAYSICGAVPLGLLTG-LGRISRNRFFNLLASTYVE-- 106

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P LV I   Y              I          S  IALS    A++ E+ R+
Sbjct: 107 VIRGIPLLVQIFYIY------------FAISMLVKMEGVTSAVIALSFCYGAYMGEVFRA 154

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++A+P GQ EAA +LG    +    V+LPQA R+IIPP+ ++ + +LK+++L   +G  
Sbjct: 155 GILAIPHGQTEAARSLGFNRVQTMFYVVLPQAWRTIIPPVGNECIAMLKDTALVSVIGMP 214

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           DL+    +  +++    E   +   +YL ++++++  ++ + A++   ++K
Sbjct: 215 DLMQRARSFASKSYCYFESYTVVALVYLIITLILSKIVSIIEARLNHYDRK 265



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 34/61 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    +  A  +G L G GR+S N+    +   YVEV R IP LV IF++Y +
Sbjct: 64  GLLLTFKVTAYSICGAVPLGLLTGLGRISRNRFFNLLASTYVEVIRGIPLLVQIFYIYFA 123

Query: 152 V 152
           +
Sbjct: 124 I 124


>gi|148983846|ref|ZP_01817165.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|147923993|gb|EDK75105.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP3-BS71]
 gi|301799546|emb|CBW32096.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae OXC141]
          Length = 521

 Score =  165 bits (419), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFL 228
             + L   ++T+  +    +   ++G+ + +F T     ++  +        +L +   +
Sbjct: 290 WQQLLRGSSITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWILNVYIEI 349

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 350 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 399

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 400 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 459

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 460 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGSSITLLISIVGTITGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|331267034|ref|YP_004326664.1| ABC transporter-amino acid transport; amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
 gi|326683706|emb|CBZ01324.1| ABC transporter-amino acid transport; amino acid-binding
           protein/permease protein [Streptococcus oralis Uo5]
          Length = 522

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +      + L    ++ ++  
Sbjct: 290 WQQLLRGAGVTLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEI 349

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 350 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 399

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 400 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 459

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +   +
Sbjct: 460 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRVLRFIERYM 503



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGVTLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|269797857|ref|YP_003311757.1| polar amino acid ABC transporter inner membrane subunit
           [Veillonella parvula DSM 2008]
 gi|269094486|gb|ACZ24477.1| polar amino acid ABC transporter, inner membrane subunit
           [Veillonella parvula DSM 2008]
          Length = 218

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   L    L           +I   S   G  + L    L+     K  + L   Y+
Sbjct: 1   MSFNWGLIADNLPLLLQGALVTVEITAMSVGCGFFIGLLV-SLANLSKFKLVRLLAKCYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P LV I L Y   F  P+      I G  + P +++   A S  + A+++EI
Sbjct: 60  D--IIRGTPLLVQIFLIY---FALPM------ITGQRIDP-YIAAVTACSINSGAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEA  +LGLT  +  R +++PQA ++IIPPL ++++ +LK+SSL   +
Sbjct: 108 FRAGIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           GF +L   G  II +T  + EI      IYL +++ I+  +  L  K ++K
Sbjct: 168 GFEELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 34/76 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    +     IG LV    LS  KLV  + + YV++ R  P LV IF +
Sbjct: 15  LLQGALVTVEITAMSVGCGFFIGLLVSLANLSKFKLVRLLAKCYVDIIRGTPLLVQIFLI 74

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++  +        +
Sbjct: 75  YFALPMITGQRIDPYI 90


>gi|301067834|ref|YP_003789857.1| amino acid ABC transporter permease/periplasmic protein
           [Lactobacillus casei str. Zhang]
 gi|300440241|gb|ADK20007.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei str. Zhang]
          Length = 482

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 18/232 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F     N  L     T+        F  V+G +L+L      +  H    KA+ 
Sbjct: 268 QDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFGTVIGTLLALM-----KLSHSWFAKAIA 322

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI    I G P LV   + +           F           F++  IA++  + A+
Sbjct: 323 NVYIEF--IRGTPLLVQAFIVF-----------FGTQILGLDLSAFVAGAIAMAINSGAY 369

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ +VP GQ EAA +LGL   +A R V+LPQA ++I P L ++++  +K SS+
Sbjct: 370 VAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQATKNIWPALGNEFVTDIKESSV 429

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G  +L+  G  +   + +    +++   +Y  ++  ++  +  +  + 
Sbjct: 430 LSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMTFTLSRLLRLIEKRF 481



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G + T   A   +   T+IGTL+   +LS +     I  VY+E  R  P LV 
Sbjct: 278 YGNYFLRGALYTLIFAVLTVFFGTVIGTLLALMKLSHSWFAKAIANVYIEFIRGTPLLVQ 337

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 338 AFIVFFGT 345


>gi|319941415|ref|ZP_08015743.1| hypothetical protein HMPREF9464_00962 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805035|gb|EFW01865.1| hypothetical protein HMPREF9464_00962 [Sutterella wadsworthensis
           3_1_45B]
          Length = 221

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/234 (27%), Positives = 113/234 (48%), Gaps = 13/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   L    +           +I   +  LG+++ L A  L++       +    +Y+
Sbjct: 1   MEFDFSLIIHSIPLLLRGAGLTLEITALAVGLGLLIGLVA-SLAQLSKSPLLRLPAKVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I G P L+ I + Y   F  P +              F++   A S  + A+IAEI
Sbjct: 60  D--CIRGTPLLIQIFIIY---FALPNIIG-------HRIDPFIAAVTACSLNSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++ +GQ  A ++LG+T+ +  R ++LPQA + IIPPL ++++ +LK+SSL   +
Sbjct: 108 FRGGIQSISQGQFRAGLSLGMTYGQTMRYIVLPQAFKRIIPPLGNEFIAMLKDSSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           GF +L   G  II +T   +EI      IYL+L++ I+ F+  L  +    + +
Sbjct: 168 GFEELTRSGQLIIAETYGTLEIWTCVAIIYLTLTLTISRFVAALEKRFRKSDDR 221



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 3/196 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +    +IG +    +LS + L+    +VYV+  R  P L+ IF +
Sbjct: 15  LLRGAGLTLEITALAVGLGLLIGLVASLAQLSKSPLLRLPAKVYVDCIRGTPLLIQIFII 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y ++ +++       +        N G     +       I    F  G+ L +   +  
Sbjct: 75  YFALPNIIGHRIDPFIAAVTACSLNSGAYIAEIFRGGIQSISQGQFRAGLSLGMTYGQTM 134

Query: 209 RH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           R+    +   + +P L      +    +LV + + ++       L      G   +    
Sbjct: 135 RYIVLPQAFKRIIPPLGNEFIAMLKDSSLVSV-IGFEELTRSGQLIIAETYGTLEIWTCV 193

Query: 267 MSLYIALSCYTAAFIA 282
             +Y+ L+   + F+A
Sbjct: 194 AIIYLTLTLTISRFVA 209


>gi|312976992|ref|ZP_07788741.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Lactobacillus crispatus
           CTV-05]
 gi|310896320|gb|EFQ45385.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Lactobacillus crispatus
           CTV-05]
          Length = 537

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 114/238 (47%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 287 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLN 346

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 347 VVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 394

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++L QA+R+ +P +T++++  
Sbjct: 395 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILLQAIRNCLPSITNEFIVN 454

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  ++
Sbjct: 455 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKRL 512



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G I    IG LVG  R               +V W+  VYV
Sbjct: 297 QYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIIRTIPTPTTRGKRWTLNVVKWLLSVYV 356

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 357 EIFRGTPMMVQAAVIYYGIAQFWH 380


>gi|297157335|gb|ADI07047.1| permease [Streptomyces bingchenggensis BCW-1]
          Length = 314

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 1/256 (0%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
            V   +   VL+ +        + +G   +                I + S VLG+VL +
Sbjct: 32  WVTAVVIIGVLASIVYAFSQGDVNWGAIPDYFFDDRILKGAGMTVWITIASMVLGVVLGI 91

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R        A+   YI  F    +   +L+     L F    LG       S  
Sbjct: 92  LL-AVMRLSKNPVSAAIAWGYIWFFRGTPVYVQLLVWFNLGLIFHYINLGPIYQDEWSDF 150

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F++  + L    AA++AEI R+GL+AV  GQ EAA ALG++H K  R ++LPQAMR 
Sbjct: 151 MTPFLAALLGLGLNEAAYMAEICRAGLLAVDEGQTEAAHALGMSHAKTLRRIVLPQAMRV 210

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PP  ++++N+LK +SL   V + +L+     I   +G   E++ +    YL L+ +++
Sbjct: 211 IVPPTGNEFINMLKTTSLLAVVQYGELLRGAQDIAQDSGSTTEMLFLAALWYLILTSVLS 270

Query: 383 LFMNRLNAKIALKEKK 398
           +    L    A    +
Sbjct: 271 VGQYYLERYYARGSSR 286



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 35/103 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T W+  + M+   ++G L+   RLS N + A I   Y+  FR  P  V +   
Sbjct: 68  ILKGAGMTVWITIASMVLGVVLGILLAVMRLSKNPVSAAIAWGYIWFFRGTPVYVQLLVW 127

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +   L    I    I            L+         A    
Sbjct: 128 FNLGLIFHYINLGPIYQDEWSDFMTPFLAALLGLGLNEAAYMA 170


>gi|260888233|ref|ZP_05899496.1| glutamine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|330838428|ref|YP_004413008.1| polar amino acid ABC transporter, inner membrane subunit
           [Selenomonas sputigena ATCC 35185]
 gi|260862067|gb|EEX76567.1| glutamine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|329746192|gb|AEB99548.1| polar amino acid ABC transporter, inner membrane subunit
           [Selenomonas sputigena ATCC 35185]
          Length = 221

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 64/191 (33%), Positives = 102/191 (53%), Gaps = 12/191 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R    K  + L + YI    + G P LV I L Y   F  PV      I G  V P F 
Sbjct: 43  ARISQVKPLRLLAMAYIDF--LRGTPLLVQIFLIY---FALPV------ISGQRVDP-FF 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +   A S  + A++AEI RSG+ ++ +GQMEA  +LG+T  +    ++LPQA++ +IP +
Sbjct: 91  AAITACSINSGAYVAEIFRSGIQSIDKGQMEAGRSLGMTWLQTMWHIILPQAVKRVIPQI 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++++ LLK+SSL   +GF +L   G  II +T  ++EI      IYL +++ I+  +  
Sbjct: 151 GNEFIALLKDSSLVSVIGFEELTRSGQLIIARTYGSLEIWPCVAIIYLVMTLSISQLVAY 210

Query: 388 LNAKIALKEKK 398
           L  +    +K 
Sbjct: 211 LERRFRTDDKH 221



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 35/76 (46%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    +    +LVG + T  +    +    +IG +VG  R+S  K +  +   Y++  R
Sbjct: 4   DFDLAVNSFPVLLVGALVTIKITAISVALGVVIGLVVGVARISQVKPLRLLAMAYIDFLR 63

Query: 138 NIPPLVVIFFLYKSVL 153
             P LV IF +Y ++ 
Sbjct: 64  GTPLLVQIFLIYFALP 79


>gi|94989745|ref|YP_597845.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|94543253|gb|ABF33301.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10270]
          Length = 528

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 355 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 404

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 405 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 464

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 465 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 508



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 355 FRGTPMIVQSMVIYYGTAQAF 375


>gi|320547997|ref|ZP_08042278.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320447343|gb|EFW88105.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 523

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY---ISTFL 228
            ++ L    +T+  +    V    +G+++ +F T          G      +   +   +
Sbjct: 292 WSQFLRGAGVTLLISIIGTVVGLFIGLLIGVFRTAPKAANKFLAGLQKAFGWLLSVYIEI 351

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 352 FRGTPMIVQAMVIYYGTAQA----------FGISIDRTIAAIFIVSINTGAYMSEIVRGG 401

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 402 IFAVDKGQFEAATALGFTHAQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 461

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 462 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRFIERRF 505



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
            +  L G   T  ++  G +    IG L+G  R +            K   W+  VY+E+
Sbjct: 292 WSQFLRGAGVTLLISIIGTVVGLFIGLLIGVFRTAPKAANKFLAGLQKAFGWLLSVYIEI 351

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 352 FRGTPMIVQAMVIYYGTAQAF 372


>gi|116496232|ref|YP_807966.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus casei ATCC 334]
 gi|116106382|gb|ABJ71524.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
          Length = 482

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 18/232 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F     N  L     T+        F  V+G +L+L      +  H    KA+ 
Sbjct: 268 QDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFGTVIGTLLALM-----KLSHSWFAKAIA 322

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI    I G P LV   + +           F           F++  IA++  + A+
Sbjct: 323 NVYIEF--IRGTPLLVQAFIVF-----------FGTQILGLDLSAFVAGAIAMAINSGAY 369

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ +VP GQ EAA +LGL   +A R V+LPQA ++I P L ++++  +K SS+
Sbjct: 370 VAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQATKNIWPALGNEFVTDIKESSV 429

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G  +L+  G  +   + +    +++   +Y  ++  ++  +  +  + 
Sbjct: 430 LSVIGATELMFEGTVVQGASFKPFLPLVVVAILYFIMTFTLSRLLRLIEKRF 481



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G + T   A   +   T+IGTL+   +LS +     I  VY+E  R  P LV 
Sbjct: 278 YGNYFLRGALYTLIFAVLTVFFGTVIGTLLALMKLSHSWFAKAIANVYIEFIRGTPLLVQ 337

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 338 AFIVFFGT 345


>gi|227903012|ref|ZP_04020817.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
 gi|227869255|gb|EEJ76676.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
          Length = 562

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 116/238 (48%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
           + + ++          +S   +T+       +  F +G+++ +  T        + +   
Sbjct: 312 NENWLVTTWKQYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALN 371

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 372 FVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 419

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P GQ EAA ALG+TH +    ++LPQA+++ +P +T++++  
Sbjct: 420 INTGAYLAEVIRGGIISTPEGQFEAASALGMTHNQRMWHIILPQAIKNCLPSITNEFIVN 479

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  ++
Sbjct: 480 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNFIEKRL 537



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G I    IG LVG  R                V W+  VYV
Sbjct: 322 QYGGMIMSGIGMTLLLALVGTIVGFFIGLLVGIVRTIPTPTTRGKRWALNFVKWLLSVYV 381

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 382 EIFRGTPMMVQAAVIYYGIAQFWH 405


>gi|306825868|ref|ZP_07459207.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432229|gb|EFM35206.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 522

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL-- 228
             + L    +T+  +    +   ++G+ + +F T  LS +      + L    ++ ++  
Sbjct: 290 WQQLLRGAGVTLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVYIEI 349

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y   +        N           ++    +S  T A++ EIVR G
Sbjct: 350 FRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYMTEIVRGG 399

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 400 ILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 459

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +   +
Sbjct: 460 LYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRVLRFIERYM 503



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGVTLLISIIGTIVGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|94987869|ref|YP_595970.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS9429]
 gi|94541377|gb|ABF31426.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS9429]
          Length = 528

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 355 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 404

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 405 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 464

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 465 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 508



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 355 FRGTPMIVQSMVIYYGTAQAF 375


>gi|282856550|ref|ZP_06265824.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
 gi|282585616|gb|EFB90910.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
          Length = 521

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 14/226 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L           K+ V +  L IVL L    ++R F  K    L   YI   ++ G
Sbjct: 290 YVGFLPTFGKAAVVTLKVSVCAMSLAIVLGLLL-AIARLFAPKILSRLATAYIE--IVRG 346

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L+ +   +   +  P +       G  +SP FM+  I L    AA+ AE  R+GL+A
Sbjct: 347 TPVLIQLFFIF---YGLPNI-------GIKLSP-FMAGVIGLGMNYAAYEAENYRAGLMA 395

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPR QME A+ALG+  ++A R V++PQA+R  +PP+T+ +++LLK+SSL   +   DL  
Sbjct: 396 VPRAQMEGALALGMDKKQALRYVVIPQAVRVSLPPVTNDFISLLKDSSLVSMITLIDLTK 455

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G + N       I ++   IY  L +           ++A+  +
Sbjct: 456 AYGQLANTYYDYFGIGIMVAVIYFLLGLPFVRLARYTERRLAVAIR 501



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +        V T  ++   M  A ++G L+   RL A K+++ +   Y+E+ R  P L+ 
Sbjct: 293 FLPTFGKAAVVTLKVSVCAMSLAIVLGLLLAIARLFAPKILSRLATAYIEIVRGTPVLIQ 352

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +FF++  + ++       +    G+ +N              A
Sbjct: 353 LFFIFYGLPNIGIKLSPFMAGVIGLGMNYAAYEAENYRAGLMA 395


>gi|71902896|ref|YP_279699.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS6180]
 gi|71801991|gb|AAX71344.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS6180]
          Length = 528

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 355 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 404

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 405 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 464

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 465 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 508



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 355 FRGTPMIVQSMVIYYGTAQAF 375


>gi|323465674|gb|ADX69361.1| Amino acid ABC transporter permease protein [Lactobacillus
           helveticus H10]
          Length = 562

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 114/238 (47%), Gaps = 17/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-----LSRHFHEK 214
             + ++          +S   +T+       V  F +G+++ +  T        + +   
Sbjct: 312 KENWLVTTWKQYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALN 371

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K L  +Y+  F   G P +V  A+ Y        + QF  +  +      ++  I +S
Sbjct: 372 VVKWLLSVYVEIF--RGTPMMVQAAVIYY------GIAQFWHLNLNRT----VAALIIVS 419

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A++AE++R G+I+ P  Q EAA ALG+TH +    ++LPQA+++ +P +T++++  
Sbjct: 420 INTGAYLAEVIRGGIISTPESQFEAASALGMTHNQKMWHIILPQAIKNCLPSITNEFIVN 479

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++S+   +  ++L  VG TI +Q+ +     L+   IYL L+  I    N +  K+
Sbjct: 480 IKDTSVLSIISVSELFFVGTTIASQSFKFFPTYLMISAIYLILTFTITRIFNLIERKL 537



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
            Y   I+ G   T  LA  G +    IG LVG  R               +V W+  VYV
Sbjct: 322 QYGGMIMSGIGMTLLLALVGTVVGFFIGLLVGIVRTIPTPTTRGKRWALNVVKWLLSVYV 381

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 382 EIFRGTPMMVQAAVIYYGIAQFWH 405


>gi|300718488|ref|YP_003743291.1| Amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064324|emb|CAX61444.1| Amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 308

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 122/269 (45%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  LVV+  L  +V S++  P     +    F     L    +T+   A   V  F  
Sbjct: 23  RWISALVVLLMLAAAVSSMVQNPRFEWQVIADSFTQQSILQGVLMTLQLTAISVVLGFTG 82

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKP 249
           G VL+L      R        ++   Y   F   G+P LV + L Y +           P
Sbjct: 83  GTVLALM-----RLSSNPVLVSVSWAYTWFF--RGVPMLVQLFLWYNIAALYPKVSVSLP 135

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +G+      +++   F +  IAL  + AA+ AEIVR+G+ +V  GQ+EAA ALG    +
Sbjct: 136 WVGELWSASSNSLISPFSAAVIALVMHQAAYAAEIVRAGIQSVGNGQLEAAKALGYRPSE 195

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R  +LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T Q I ++L+
Sbjct: 196 IFRYTVLPQAMRAILPPAGNEIIGQLKTTAVVSVIALQDVLFSAQIIYQRTYQVIPLLLV 255

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++++    +    A    +
Sbjct: 256 ATLWYLLMTSVLSVGQFYVERYFARGVTR 284



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            +IL G + T  L    ++     GT++   RLS+N ++  +   Y   FR +P LV +F
Sbjct: 59  QSILQGVLMTLQLTAISVVLGFTGGTVLALMRLSSNPVLVSVSWAYTWFFRGVPMLVQLF 118

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
             Y        +      +      ++  L  P         +   ++   IV +
Sbjct: 119 LWYNIAALYPKVSVSLPWVGELWSASSNSLISPFSAAVIALVMHQAAYAAEIVRA 173


>gi|302390115|ref|YP_003825936.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermosediminibacter oceani DSM 16646]
 gi|302200743|gb|ADL08313.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermosediminibacter oceani DSM 16646]
          Length = 220

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 66/223 (29%), Positives = 114/223 (51%), Gaps = 13/223 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++       T  +I + + ++GI +  F   + +       K +   Y+   +I G P
Sbjct: 11  PYINLFFKGALTAIEITLLAVLIGIFIGTFVG-MGKMSRVFILKFICSAYVE--VIRGTP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y   F  P +  F         PEF +  +AL   +  ++AEIVR G++AV 
Sbjct: 68  LLVQLLIFY---FGLPQILGFTI-------PEFTAAVLALGINSGGYVAEIVRGGILAVD 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA +LG++H +A R ++LPQA + +IPPL ++++ LLKNSSLA  +GF++L    
Sbjct: 118 RGQMEAARSLGMSHAQAMRYIILPQAFKKMIPPLGNEFITLLKNSSLATTIGFSELTRAA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   T +  E  L     Y  +++  +  +  L  ++A  +
Sbjct: 178 QIVAGNTYKPFEPYLTAAAFYFIMTLGFSWILGVLERRLAAGD 220



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y      G +    +    ++    IGT VG G++S   ++ +IC  YVEV 
Sbjct: 4   LDFSIVLPYINLFFKGALTAIEITLLAVLIGIFIGTFVGMGKMSRVFILKFICSAYVEVI 63

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P LV +   Y  +  +
Sbjct: 64  RGTPLLVQLLIFYFGLPQI 82


>gi|325567258|ref|ZP_08143925.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158691|gb|EGC70837.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 529

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 17/228 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLLYI 224
                 L    LT+       +   ++G+++ +F T          F ++    L  +YI
Sbjct: 298 DYGMLFLRGAGLTLFIAILSTIIGLIIGLLVGIFRTLPLSENPVGRFFQRIVNGLLTIYI 357

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P +V   + +              +         ++  + +S  T A+++EI
Sbjct: 358 EVF--RGTPMMVQAMVIFYG----------TALAFGVSMNRTLAAVLIVSINTGAYMSEI 405

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR G+ AV  GQ EAA A+G+TH +    V+LPQ MR+I+P   ++ +  +K++++   +
Sbjct: 406 VRGGIFAVDDGQFEAAQAIGMTHWQTMIKVVLPQVMRNILPATGNEIIINIKDTAVLSVI 465

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ADL   G +      Q  +   I   IYL L+I     +  +  K+
Sbjct: 466 SVADLFFQGTSAAGTNFQYFQTFAIIGVIYLVLTISATQILRFVERKM 513



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 15/108 (13%)

Query: 64  LSERA---GFEIDQGIVPYTSD--SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
           L + A   G   DQG++         Y    L G   T ++A    I   IIG LVG  R
Sbjct: 273 LDQPADASGETADQGLIADFKKIIDDYGMLFLRGAGLTLFIAILSTIIGLIIGLLVGIFR 332

Query: 119 LSAN----------KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
                         ++V  +  +Y+EVFR  P +V    ++       
Sbjct: 333 TLPLSENPVGRFFQRIVNGLLTIYIEVFRGTPMMVQAMVIFYGTALAF 380


>gi|322833910|ref|YP_004213937.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169111|gb|ADW74810.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 327

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +VV+      V +V   P+    +    F     +    +T+       +    +
Sbjct: 35  RWIAWIVVLLIAADVVWAVSHNPNFEWHVVAQWFTEGSVIKGLGVTLGLTVVSMLLGVFI 94

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKP 249
           G++L++     S       G     LYI  F   G P LV +   Y +           P
Sbjct: 95  GLMLAIARLSDSLLLRRLAG-----LYIWFF--RGTPLLVQLLFWYNMSTLFPRVVLGVP 147

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              ++     + +     +    L+   AA++AEI+R+GL++V  GQ E A A G++  +
Sbjct: 148 FGPEYMSWNTNDLITPLTAAIAGLALNEAAYMAEIIRAGLLSVDNGQAETAQAFGMSRGR 207

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R +++PQAMRSIIPP  +Q ++++K +SL   +   DL+    T+ N+T + + ++++
Sbjct: 208 ALRRIIIPQAMRSIIPPTGNQLISMIKATSLVSVIAMGDLLYSVQTVYNRTFEVVPMLMV 267

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  YL ++ ++ L  + +    +   ++
Sbjct: 268 AVIWYLFITSLLNLGQSAIERYYSRGTRR 296



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 41/112 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    M+    IG ++   RLS + L+  +  +Y+  FR  P LV + F Y
Sbjct: 74  IKGLGVTLGLTVVSMLLGVFIGLMLAIARLSDSLLLRRLAGLYIWFFRGTPLLVQLLFWY 133

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
                   +       P  M  N   L  P         +   +++  I+ +
Sbjct: 134 NMSTLFPRVVLGVPFGPEYMSWNTNDLITPLTAAIAGLALNEAAYMAEIIRA 185


>gi|302189421|ref|ZP_07266094.1| putative ABC transport system, ATP-binding protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 506

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 14/240 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   FG+F +          +  +   +V S VLG +L+L     ++         
Sbjct: 1   MTFDWKYMFGLFSDTEFWMATWTVIQLSVLTWVISIVLGFILAL-----AKQSSLPLINL 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               YI  F    LP LVL+   Y L    P          + ++  F +  IA+     
Sbjct: 56  PAKAYIWLF--RSLPLLVLLIFVYNLPQAVPA-------TSAVLANPFWAGLIAMVMCET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R GL+++ +GQ EAA ALGL        +++PQA+R  +P LT++Y++++K S
Sbjct: 107 AYVAEIHRGGLLSIAKGQTEAARALGLRFVGTQWRIVIPQALRVALPSLTNEYISIVKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + + K
Sbjct: 167 SLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVLIVTVFDFLLKRLERYLDVTQHK 226



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 6/193 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             +       L+    + + ++G ++   + S+  L+    + Y+ +FR++P LV++ F+
Sbjct: 17  FWMATWTVIQLSVLTWVISIVLGFILALAKQSSLPLINLPAKAYIWLFRSLPLLVLLIFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLF 203
           Y    +V           +   +         +       +   +         + L   
Sbjct: 77  YNLPQAVPATSAVLANPFWAGLIAMVMCETAYVAEIHRGGLLSIAKGQTEAARALGLRFV 136

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTV 262
            T+      +    ALP L      I  L +LV +I+L   L   + +  Q   +  +  
Sbjct: 137 GTQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMA 196

Query: 263 SPEFMSLYIALSC 275
           +  F  + I    
Sbjct: 197 AVAFYYVLIVTVF 209


>gi|251781764|ref|YP_002996066.1| ABC transporter amino acid-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390393|dbj|BAH80852.1| ABC transporter amino acid-binding protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 528

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAVLGQKLFGWLLTIYIEI 354

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 355 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 404

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 405 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 464

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 465 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 508



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAVLGQKLFGWLLTIYIEI 354

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 355 FRGTPMIVQSMVIYYGTAQAF 375


>gi|317404446|gb|EFV84860.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 368

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 19/244 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL--GIVLSLFATRLSRHFH 212
            L  P   + L +G+  ++R +      M     +   +  +  G+VL+L      R   
Sbjct: 142 TLRTPGALMNLDWGIIWDSRQVLLQGAAMTVMLTVVTMALAVPGGMVLALM-----RLSS 196

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +    + +  +  F       L LI + Y   +  P+     F           +  +A
Sbjct: 197 NRVANGVAVAIVEFFRN-----LPLILVIYWAFYVMPMALDVQF-------SAVTTALVA 244

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L    +A+ +E  R+G+ ++ +GQMEAA+A+G++ R+A   VL+PQA R I+P L S ++
Sbjct: 245 LVLNVSAYNSETFRAGINSIRKGQMEAALAMGMSRRQAMFKVLVPQAARRILPVLASTWI 304

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L K++SL   +  ++L      +  Q+ + +E++     IY  +    A  ++ ++ K 
Sbjct: 305 SLFKDTSLVSVIAVSELAYASMQVRAQSFRVLEMLTAMAVIYWLMGYPQAKLVDWIHRKY 364

Query: 393 ALKE 396
            +KE
Sbjct: 365 GVKE 368



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 33/69 (47%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  L    M  A   G ++   RLS+N++   +    VE FRN+P ++VI+
Sbjct: 162 QVLLQGAAMTVMLTVVTMALAVPGGMVLALMRLSSNRVANGVAVAIVEFFRNLPLILVIY 221

Query: 147 FLYKSVLSV 155
           + +  +   
Sbjct: 222 WAFYVMPMA 230


>gi|218296356|ref|ZP_03497099.1| polar amino acid ABC transporter, inner membrane subunit [Thermus
           aquaticus Y51MC23]
 gi|218243150|gb|EED09681.1| polar amino acid ABC transporter, inner membrane subunit [Thermus
           aquaticus Y51MC23]
          Length = 263

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ + S + G+V+ + A  ++R       +     YI  ++  G P LV I   Y    
Sbjct: 59  LKLTLISGLAGLVIGVLAG-MARLSSRAWVRLPATFYI--WVTRGTPLLVQILFAYN--- 112

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L Q  + G       + + +IALS    A+ AE+VR+G+ A+P+GQ EAA +LGL+
Sbjct: 113 ALPFLLQPLWPGAQQALTPYWAAFIALSFNVGAYNAEVVRAGIQAIPKGQWEAAWSLGLS 172

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LPQA+R ++PPL +  + LLK+SSLA  +  A+L   G  II+ T + +E+
Sbjct: 173 PVDTMRFVVLPQALRIVVPPLVNNLVALLKDSSLASVITLAELALSGQRIISATFRPVEV 232

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L    IYL L+ ++  F NRL  ++ +  +
Sbjct: 233 YLAVAAIYLLLTTVLTQFTNRLEERLKVAGR 263



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 31/86 (36%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+  G   T  L     +   +IG L G  RLS+   V      Y+ V R  P LV I
Sbjct: 48  GRAMAEGAEITLKLTLISGLAGLVIGVLAGMARLSSRAWVRLPATFYIWVTRGTPLLVQI 107

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL 171
            F Y ++  +L             + 
Sbjct: 108 LFAYNALPFLLQPLWPGAQQALTPYW 133


>gi|171743321|ref|ZP_02919128.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC
           27678]
 gi|306823266|ref|ZP_07456642.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309801894|ref|ZP_07696009.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171278935|gb|EDT46596.1| hypothetical protein BIFDEN_02452 [Bifidobacterium dentium ATCC
           27678]
 gi|304553898|gb|EFM41809.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308221450|gb|EFO77747.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 514

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 13/221 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L    + +     I V SF + ++L + A  L R    +    +  +Y++ F   G P
Sbjct: 307 QSLPALMIGLKNTLFITVISFAIALLLGV-AFGLMRVGENRVASGVSKVYVAIF--RGTP 363

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV     +  +F  P L     IG S     +++  + LS  + A++AEIVR  + AV 
Sbjct: 364 ILVW---AFFFYFGVPQL-----IGHSVNI--WIAGALTLSLNSGAYLAEIVRGAIQAVD 413

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQME A +LGL  R++   V+LPQA +  +P + +Q + ++K+SSL +A+GF +L+   
Sbjct: 414 PGQMEGARSLGLNRRQSMARVILPQASKIAMPSVINQLVIMIKDSSLLLAIGFGELLYQA 473

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +     +  E +L+   IY     M+    N ++ K+  
Sbjct: 474 QQLYAANFRVTETLLLVGVIYFVAITMLTWLANIVDRKVNR 514



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 39/77 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+++G  NT ++       A ++G   G  R+  N++ + + +VYV +FR  P LV  FF
Sbjct: 311 ALMIGLKNTLFITVISFAIALLLGVAFGLMRVGENRVASGVSKVYVAIFRGTPILVWAFF 370

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  V  ++    +  +
Sbjct: 371 FYFGVPQLIGHSVNIWI 387


>gi|94993627|ref|YP_601725.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10750]
 gi|94547135|gb|ABF37181.1| ABC transporter amino acid-binding protein / Amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS10750]
          Length = 528

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 355 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 404

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 405 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 464

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 465 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 508



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 355 FRGTPMIVQSMVIYYGTAQAF 375


>gi|110632402|ref|YP_672610.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283386|gb|ABG61445.1| amino acid ABC transporter membrane protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 309

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/290 (23%), Positives = 133/290 (45%), Gaps = 16/290 (5%)

Query: 117 GRLSANKLVAWICRVYVEV--FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G+ +A ++   +   Y     +R +  LV+ + + ++V+ V   P+           +  
Sbjct: 13  GQSAALRVSRNVADAYKPFPIWRLVAWLVLGWIVLEAVMLVGQNPNFGWATVGEYLFHQN 72

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L    +T+  +        + G+V++L      R   ++        ++  F    +P 
Sbjct: 73  ILDGLKITLGLSVVSMALGILFGLVIALM-----RMSPDRLLSGFAAGFLWFF--RAVPL 125

Query: 235 LVLIALKYQLH-------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LV +   Y L           P   +      +++     +  I L+ + AA++AEI+R 
Sbjct: 126 LVQLIFWYNLSALFPEVKISIPFGPELGAWETNSLISPLTAAIIGLALHEAAYMAEIIRG 185

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL++V RGQ+EA  A G++  +A R V+LPQAMR I+PP  +Q+++++K +SL   +  +
Sbjct: 186 GLLSVDRGQIEATQAFGMSRARALRRVILPQAMRFIVPPSGNQFISMVKATSLVSVIAMS 245

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           DL+     I N+T + I ++L+    YL +  ++ +    L       E+
Sbjct: 246 DLLYSVQAIYNRTFEVIPLLLVAAAWYLFIVSLLNVGQEFLERHFGRSER 295



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 40/113 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L+   M    + G ++   R+S ++L++     ++  FR +P LV + F 
Sbjct: 73  ILDGLKITLGLSVVSMALGILFGLVIALMRMSPDRLLSGFAAGFLWFFRAVPLLVQLIFW 132

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y        +       P         L  P         +   +++  I+  
Sbjct: 133 YNLSALFPEVKISIPFGPELGAWETNSLISPLTAAIIGLALHEAAYMAEIIRG 185


>gi|187779364|ref|ZP_02995837.1| hypothetical protein CLOSPO_02960 [Clostridium sporogenes ATCC
           15579]
 gi|187772989|gb|EDU36791.1| hypothetical protein CLOSPO_02960 [Clostridium sporogenes ATCC
           15579]
          Length = 188

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 101/189 (53%), Gaps = 3/189 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    K  K + + YI    I G P LV + + Y       +      I GS   P+F +
Sbjct: 2   KLSKNKVLKYIAVSYIEF--IRGTPVLVQLYIIYYGLPTIGINFPEVPILGSNF-PDFFA 58

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS  + A++AEI+R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L 
Sbjct: 59  GILALSINSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALG 118

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ ++K SS+   +G  +L+    T+     +  E +L+   +Y  ++  ++  +   
Sbjct: 119 NEFITIIKESSIVSIIGIHELMYNADTVRGNIFKPFEPLLVAAVMYFIMTFTLSKLLGVA 178

Query: 389 NAKIALKEK 397
             ++ + ++
Sbjct: 179 ERRMRVSDR 187


>gi|169837461|ref|ZP_02870649.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [candidate division TM7
           single-cell isolate TM7a]
          Length = 417

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 111/258 (43%), Gaps = 25/258 (9%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI----FVFSFVLGIVLSLF 203
           + +  +   P         +  F                  I     +  F +G+V++LF
Sbjct: 155 IMEKAIQNQPNETSRSFFGWVTFFIQNNWKTFLKGTVVTLFISVTGTIVGFFIGLVVALF 214

Query: 204 ATRLS---------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
               +         +    K    L  +YI+ F   G P +V   + Y            
Sbjct: 215 RYSEAEIDGQAKKYKKGGLKVLNWLFSVYIAVF--RGTPMIVQSMVIYY---------GL 263

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           + +    +SP   +L+I +S  T A+++EI+R G+ ++  GQ EAA A+G+T+ +  + +
Sbjct: 264 SQVFNLNLSPLIAALFI-VSINTGAYMSEIIRGGIDSIDTGQFEAAKAIGMTNFQLMKSI 322

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           + PQ  R+I+P + ++ +  +K++S+   +   +L  +  ++     +  E+ +I   IY
Sbjct: 323 IFPQMFRNILPMIGNELIVNIKDTSVLNVISVTELFFISNSVAGTYSRYYEVFIITSVIY 382

Query: 375 LSLSIMIALFMNRLNAKI 392
             L+  ++L + ++  +I
Sbjct: 383 FFLTFTLSLILKQIEKRI 400



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 14/88 (15%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN--------------KLVAWI 128
            +     L G V T +++ +G I    IG +V   R S                K++ W+
Sbjct: 180 QNNWKTFLKGTVVTLFISVTGTIVGFFIGLVVALFRYSEAEIDGQAKKYKKGGLKVLNWL 239

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             VY+ VFR  P +V    +Y  +  V 
Sbjct: 240 FSVYIAVFRGTPMIVQSMVIYYGLSQVF 267


>gi|50913614|ref|YP_059586.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS10394]
 gi|50902688|gb|AAT86403.1| ABC transporter amino acid-binding protein [Streptococcus pyogenes
           MGAS10394]
          Length = 528

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 355 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 404

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 405 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 464

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 465 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 508



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 295 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 354

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 355 FRGTPMIVQSMVIYYGTAQAF 375


>gi|238019429|ref|ZP_04599855.1| hypothetical protein VEIDISOL_01298 [Veillonella dispar ATCC 17748]
 gi|237864128|gb|EEP65418.1| hypothetical protein VEIDISOL_01298 [Veillonella dispar ATCC 17748]
          Length = 218

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   L    L           +I   S   G  + L    L+        + L   Y+
Sbjct: 1   MSFNWGLIADNLPLLLQGALVTVEITAMSVGCGFFIGLLV-SLANLSKFTVVRLLAKCYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P LV I L Y   F  P+      I G  + P F++   A S  + A+++EI
Sbjct: 60  D--IIRGTPLLVQIFLIY---FALPM------ITGQRIDP-FIAAVTACSINSGAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEA  +LGLT  +  R +++PQA ++IIPPL ++++ +LK+SSL   +
Sbjct: 108 FRAGIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           GF +L   G  II +T  + EI      IYL +++ I+  +  L  K ++K
Sbjct: 168 GFEELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    +     IG LV    LS   +V  + + YV++ R  P LV IF +
Sbjct: 15  LLQGALVTVEITAMSVGCGFFIGLLVSLANLSKFTVVRLLAKCYVDIIRGTPLLVQIFLI 74

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++  +        +
Sbjct: 75  YFALPMITGQRIDPFI 90


>gi|257866637|ref|ZP_05646290.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872847|ref|ZP_05652500.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257800595|gb|EEV29623.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257807011|gb|EEV35833.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 529

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 15/214 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I + S ++G+++ L              + LPL        F      L+ +  ++
Sbjct: 309 LTLFIAILSTIIGLIIGLLVG---------IFRTLPLSENPVGRFFQRIVNGLLTIYIEV 359

Query: 245 HFDKPVLGQFNFIGGST------VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
               P++ Q   I   T           ++  + +S  T A+++EIVR G+ AV  GQ E
Sbjct: 360 FRGTPMMVQAMVIFYGTALAFGVSMNRTLAAVLIVSINTGAYMSEIVRGGIFAVDDGQFE 419

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A+G++H +    V+LPQ MR+I+P   ++ +  +K++++   +  ADL   G +   
Sbjct: 420 AAQAIGMSHWQTMIKVVLPQVMRNILPATGNEIIINIKDTAVLSVISVADLFFQGTSAAG 479

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              Q  +   I   IYL L+I     +  +  K+
Sbjct: 480 TNFQYFQTFAIIGVIYLVLTISATQILRFVERKM 513



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 15/108 (13%)

Query: 64  LSERA---GFEIDQGIVPYTSD--SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
           L + A   G   DQG++         Y    L G   T ++A    I   IIG LVG  R
Sbjct: 273 LDQPADASGETADQGLIADFKKIIDDYGMLFLRGAGLTLFIAILSTIIGLIIGLLVGIFR 332

Query: 119 LSAN----------KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
                         ++V  +  +Y+EVFR  P +V    ++       
Sbjct: 333 TLPLSENPVGRFFQRIVNGLLTIYIEVFRGTPMMVQAMVIFYGTALAF 380


>gi|325000355|ref|ZP_08121467.1| amino acid ABC transporter membrane protein [Pseudonocardia sp. P1]
          Length = 301

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 10/216 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH- 245
             +   S  +GI   +    + R        ++  +Y+  F   G P +  +   Y L  
Sbjct: 67  LVLTALSMAIGIAGGIGL-AVMRLSPNPVLSSVAAVYLWVF--RGTPLIAQLLFWYFLSA 123

Query: 246 ------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                    P   +F  +  +T+   F +  + L    AA++AEIVRSG+ +V  GQ EA
Sbjct: 124 LYPRLSLGIPFGPEFVVVDTNTLISPFAAALLGLGLNEAAYMAEIVRSGIQSVDGGQSEA 183

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALG+T  +  R V+LPQAMR I+PP  ++ + +LK +SL V +G+ +L++    I + 
Sbjct: 184 AGALGMTRAQTLRRVVLPQAMRVIVPPTGNETIGMLKTTSLVVVIGYLELLTSVQRIYSA 243

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + I ++++    YL L+ ++ +    +  +    
Sbjct: 244 NFEVIPLLIVAAAWYLVLTSLLTVGQRAVERRFGRG 279



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L    M      G  +   RLS N +++ +  VY+ VFR  P +  + F Y
Sbjct: 60  LNGLRNTLVLTALSMAIGIAGGIGLAVMRLSPNPVLSSVAAVYLWVFRGTPLIAQLLFWY 119

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
                   +       P  + ++   L  P         +   +++  IV S
Sbjct: 120 FLSALYPRLSLGIPFGPEFVVVDTNTLISPFAAALLGLGLNEAAYMAEIVRS 171


>gi|329770427|ref|ZP_08261809.1| hypothetical protein HMPREF0433_01573 [Gemella sanguinis M325]
 gi|328836550|gb|EGF86210.1| hypothetical protein HMPREF0433_01573 [Gemella sanguinis M325]
          Length = 213

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 116/221 (52%), Gaps = 14/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
               +       T  K+ + + ++G++L +    L++    +    +  +Y+   +I   
Sbjct: 6   PNYYTTYLDATITTLKVSLIALLVGLILGIVVC-LAKISTYRVFNIIATIYVE--IIRNT 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y           F           FMS  IALS  + A+++EI RSG++A+
Sbjct: 63  PILVQIMIIY-----------FALPEVGISFTPFMSAIIALSINSGAYVSEIFRSGILAI 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEA  +LGL++ +  +L++LPQA+++ +P L +++++L+K SS+   VG AD++  
Sbjct: 112 DKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPSLGNEFISLVKESSIVYFVGVADIMFT 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             T+ N T Q     L+   IY  ++ +++L + RL  K+A
Sbjct: 172 ANTVKNATYQTFGPYLVAAAIYFVITSILSLLVKRLEKKLA 212



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    +Y T  L   + T  ++   ++   I+G +V   ++S  ++   I  +YVE+ RN
Sbjct: 2   FDFLPNYYTTYLDATITTLKVSLIALLVGLILGIVVCLAKISTYRVFNIIATIYVEIIRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P LV I  +Y ++  V       +     + +N+             A 
Sbjct: 62  TPILVQIMIIYFALPEVGISFTPFMSAIIALSINSGAYVSEIFRSGILAI 111


>gi|257790013|ref|YP_003180619.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|325830079|ref|ZP_08163536.1| ABC transporter, permease protein [Eggerthella sp. HGA1]
 gi|257473910|gb|ACV54230.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|325487546|gb|EGC89984.1| ABC transporter, permease protein [Eggerthella sp. HGA1]
          Length = 450

 Score =  165 bits (417), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 15/259 (5%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P   +  +L           +  + L F   +    +            + + SF L I 
Sbjct: 168 PAEQLSTWLGMQDWVKAWNSNKFLHLFFDPSIIVTSVPVVFSGWLIAIALVIVSFPLAIP 227

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           + L      R    +  +AL   YI+  ++ G P  + I + +   F  P+L        
Sbjct: 228 IGLL-WSFMRMAKSRVPRALGATYIN--IVRGTPLFLQIYIAF---FGLPLL-------- 273

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                 F+   I L   ++A++AEI R+G+ ++  GQ EAA +LG+   +    V++PQ 
Sbjct: 274 GIKMDLFVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAARSLGMNGAQTMFYVIIPQT 333

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R +IP +TS+++ + K++SL  AVG  +++    TI   TG  +   ++    YL ++I
Sbjct: 334 VRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATGN-VTPYIVAAGFYLIVTI 392

Query: 380 MIALFMNRLNAKIALKEKK 398
            +   +N +  ++A   KK
Sbjct: 393 PMTKLINSMEQRMAGGRKK 411



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G++    L       A  IG L    R++ +++   +   Y+ + R  P  + I+ 
Sbjct: 206 VVFSGWLIAIALVIVSFPLAIPIGLLWSFMRMAKSRVPRALGATYINIVRGTPLFLQIYI 265

Query: 148 LYKSVLSVLPIPD 160
            +  +  +    D
Sbjct: 266 AFFGLPLLGIKMD 278


>gi|282848846|ref|ZP_06258236.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|294791750|ref|ZP_06756898.1| glutamine ABC transporter, permease protein [Veillonella sp.
           6_1_27]
 gi|294793611|ref|ZP_06758748.1| glutamine ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|282581351|gb|EFB86744.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|294455181|gb|EFG23553.1| glutamine ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|294456980|gb|EFG25342.1| glutamine ABC transporter, permease protein [Veillonella sp.
           6_1_27]
          Length = 218

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   L    L           +I   S   G  + L    L+     +  + L   Y+
Sbjct: 1   MSFNWGLIADNLPLLLQGALVTVEITAMSVGCGFFIGLLV-SLANLSKFRLVRLLAKCYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P LV I L Y   F  P+      I G  + P +++   A S  + A+++EI
Sbjct: 60  D--IIRGTPLLVQIFLIY---FALPM------ITGQRIDP-YIAAVTACSINSGAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEA  +LGLT  +  R +++PQA ++IIPPL ++++ +LK+SSL   +
Sbjct: 108 FRAGIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           GF +L   G  II +T  + EI      IYL +++ I+  +  L  K ++K
Sbjct: 168 GFEELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    +     IG LV    LS  +LV  + + YV++ R  P LV IF +
Sbjct: 15  LLQGALVTVEITAMSVGCGFFIGLLVSLANLSKFRLVRLLAKCYVDIIRGTPLLVQIFLI 74

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++  +        +
Sbjct: 75  YFALPMITGQRIDPYI 90


>gi|221196254|ref|ZP_03569301.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221202927|ref|ZP_03575946.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221176861|gb|EEE09289.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221182808|gb|EEE15208.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 500

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                     +  +        + +  +  ++VF  +LG  ++L     +R  H+   K 
Sbjct: 1   MQFDWHYALQLLWDKDFWRACVVVVKLSVSVWVFGVLLGFPVAL-----ARQSHQPALKR 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               YI  F    LP LVL+   Y L    P          + +S  F +  IA+     
Sbjct: 56  AAAAYIWFF--RSLPLLVLLVFIYNLPQVFPA-------TSTVLSDPFTAGLIAMVLSET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R G+++VPRGQ+EA  ALG+      R++++PQA+R  +P L ++++ ++K +
Sbjct: 107 AYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQAIRIALPALANEFITIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q     E +L   F Y+ +  + +  +  L   + +  +
Sbjct: 167 SLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLLGYLERHLDVSRR 225



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 8/177 (4%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
              ++G  V   R S    +      Y+  FR++P LV++ F+Y  +  V P     +  
Sbjct: 34  FGVLLGFPVALARQSHQPALKRAAAAYIWFFRSLPLLVLLVFIYN-LPQVFPATSTVLSD 92

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFS----FVLGIVLSLFATRLSRHF--HEKTGKAL 219
           PF   L    LS      + +    +         G  L +  T + R     +    AL
Sbjct: 93  PFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQAIRIAL 152

Query: 220 PLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           P L      I  L +LV +I+L   L   + +  Q   +  + ++  F  + I    
Sbjct: 153 PALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVF 209


>gi|302336124|ref|YP_003801331.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
 gi|301319964|gb|ADK68451.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
          Length = 748

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 119/265 (44%), Gaps = 15/265 (5%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           + V  N P   V+ +L              + + F   L                 I + 
Sbjct: 438 ISVIANTPVQQVVNWLDGQGWVAAWNSVPFLGMFFKPQLLVTSFVSLFGGWLVCLGIVIV 497

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           ++   I+L L    + +    +  + +  +YI+  ++ G P  + I   Y + F  P++ 
Sbjct: 498 AYPFAILLGLL-FAIMKISGVRLARGVAAVYIN--VLRGTPLFLQI---YIMFFGLPMM- 550

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                 G  +    + + + ++  ++A++AEI R+G+ ++P+GQ EAA +LG+   +   
Sbjct: 551 ------GINIDNNVLGVMV-MAINSSAYLAEIFRAGIQSIPQGQYEAAASLGMNRAQTML 603

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQ +R +IP +TS ++   K++SL  +VG  +L+     +   +G  I   +    
Sbjct: 604 SIILPQTVRRVIPTVTSDFITSYKDTSLLSSVGVMELMMFSKNLTTVSGN-ITPYMAAAI 662

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
            YL +++ +   ++ +  ++A  E+
Sbjct: 663 YYLIVTLPLIRIVSLVERRLANAER 687



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G++    +       A ++G L    ++S  +L   +  VY+ V R  P  + I+ +
Sbjct: 484 LFGGWLVCLGIVIVAYPFAILLGLLFAIMKISGVRLARGVAAVYINVLRGTPLFLQIYIM 543

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  +  +    D++++    M +N
Sbjct: 544 FFGLPMMGINIDNNVLGVMVMAIN 567


>gi|104773375|ref|YP_618355.1| amino acid ABC transporter permease/substrate-binding protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422456|emb|CAI97009.1| Amino acid ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 527

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 13/225 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALP--LLYISTF 227
                L    +T+  +    +    +G+++S+  T    ++  +K   A    LL +   
Sbjct: 291 YGQMILEGIGMTLLISLVSTIAGIFIGLLVSIVRTIPEPKNKFKKGLLAFCKWLLSVYVE 350

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P +V  A+ Y        + QF  I  +      ++  I +S  T A++AE++R 
Sbjct: 351 IFRGTPMMVQAAVIYY------GIAQFWHINLNRT----VAALIIVSINTGAYLAEVIRG 400

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+I+ P+GQ EAA ALG+TH +    ++LPQA+R+ +P +T++++  +K++S+   +  +
Sbjct: 401 GIISTPKGQFEAASALGMTHNQRMWNIILPQAIRNCLPSITNEFIVNIKDTSVLSIISVS 460

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L  VG TI +Q+ Q  +  L+   IYL L+  I    N +   I
Sbjct: 461 ELFFVGSTIASQSFQFFQTYLVISVIYLFLTFTITRIFNLIEKHI 505



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYV 133
           +Y   IL G   T  ++    I    IG LV   R                  W+  VYV
Sbjct: 290 NYGQMILEGIGMTLLISLVSTIAGIFIGLLVSIVRTIPEPKNKFKKGLLAFCKWLLSVYV 349

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLP 157
           E+FR  P +V    +Y  +     
Sbjct: 350 EIFRGTPMMVQAAVIYYGIAQFWH 373


>gi|302379711|ref|ZP_07268196.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3]
 gi|302312618|gb|EFK94614.1| ABC transporter, permease protein [Finegoldia magna ACS-171-V-Col3]
          Length = 526

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 15/246 (6%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
            P    S V        +  L    +T+   +   +  F++GI++++           K 
Sbjct: 277 QPQGFLSKVKNIFNEYGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKF 336

Query: 216 GKALP-----LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              L      +L     +  G P +V   L Y   F   +    +            +  
Sbjct: 337 TYYLHKFINFILACYVEIFRGTPMMVQSMLIY---FGAKLYLGID-------MAPISAAL 386

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             +S  T A+++E+VR G+ +V  GQMEA  ALG+TH ++   V+LPQA+++I+P + ++
Sbjct: 387 FIVSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQAIKNILPSIGNE 446

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +   +L  V  +I   T    E   +   IY  L+  +   +  +  
Sbjct: 447 FVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLTFSLTRILLYIEK 506

Query: 391 KIALKE 396
           K   +E
Sbjct: 507 KSNNRE 512



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 12/79 (15%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA------------NKLVAWICRVY 132
           Y +  L G + T ++A    I   +IG LV   R               +K + +I   Y
Sbjct: 292 YGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKFTYYLHKFINFILACY 351

Query: 133 VEVFRNIPPLVVIFFLYKS 151
           VE+FR  P +V    +Y  
Sbjct: 352 VEIFRGTPMMVQSMLIYFG 370


>gi|271964435|ref|YP_003338631.1| amino acid ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270507610|gb|ACZ85888.1| amino acid ABC transporter, permease protein [Streptosporangium
           roseum DSM 43021]
          Length = 332

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 14/267 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +    V+  L  +  +++  P     +          L     T++  A    F F+L
Sbjct: 72  RWVTAAAVVVLLAMAASALITNPAWEWEVVGEFLFAPSVLRSVVFTLELTALGIGFGFLL 131

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKP 249
           G VL+L      R        ++   YI+ F    +P ++ +   Y L        F  P
Sbjct: 132 GTVLALM-----RMSANPLLSSVAWGYIALF--RSIPLILQLLFWYNLALLYPRLSFGVP 184

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F  IG   +     +  + L+ + AA+ AEIVR+GL++V  GQ EAA ALG+   +
Sbjct: 185 FGPSFFDIGTMDLIGPVTAAALGLALHQAAYAAEIVRAGLLSVDHGQREAAAALGIPRSR 244

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQAMRSI+P   ++ + L+K +S+   +   +L      I N+ G+ I ++L+
Sbjct: 245 QLFRIVLPQAMRSIVPTAGNEIIGLVKGTSMVYIMALPELFYQVQVIYNRNGRVIALLLV 304

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
               YL ++ ++++  + L        
Sbjct: 305 ATIWYLVMTTVLSVVQHYLERHYGKGR 331



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 50/117 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A ++L   V T  L   G+    ++GT++   R+SAN L++ +   Y+ +FR+IP ++ 
Sbjct: 106 FAPSVLRSVVFTLELTALGIGFGFLLGTVLALMRMSANPLLSSVAWGYIALFRSIPLILQ 165

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           + F Y   L    +       P    +    L  P         +   ++   IV +
Sbjct: 166 LLFWYNLALLYPRLSFGVPFGPSFFDIGTMDLIGPVTAAALGLALHQAAYAAEIVRA 222


>gi|242243789|ref|ZP_04798233.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis W23144]
 gi|242232757|gb|EES35069.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis W23144]
          Length = 239

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   N     T++P  ++  I LS    A+ +EI+R G++++P+GQ EAA ++G+ +R
Sbjct: 91  GRLVTNNADNQWTLAP-VVAAVIGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I L
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYL 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      ++I    +
Sbjct: 210 LVALMYWVVCFVISIIQGWYESRIERGYR 238



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   II       R+S +KL+  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFILGLIIALFTALMRISTSKLLRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  ++    + +      +   +L +   A   +   +L I
Sbjct: 91  GRLVTNNADNQWTLAPVVAAVIGLSLNVGAYASEIIRGGILSI 133


>gi|139473094|ref|YP_001127809.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes str. Manfredo]
 gi|134271340|emb|CAM29558.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pyogenes str. Manfredo]
          Length = 522

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 502



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|294628576|ref|ZP_06707136.1| amino acid ABC transporter, permease [Streptomyces sp. e14]
 gi|292831909|gb|EFF90258.1| amino acid ABC transporter, permease [Streptomyces sp. e14]
          Length = 286

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 10/243 (4%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
            SV+        +    F ++  L    LT+   A +    F LG +L++F     R   
Sbjct: 49  TSVVRNQAFQWDVVADYFTSDSVLRGLWLTLWLTAVVMALGFALGTLLAVF-----RLSA 103

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               +A+   Y+  F    +P LV + L + +    P +     +    +        I 
Sbjct: 104 NPVLRAVSWGYVWLF--RSIPILVQLLLWFNIGALYPRVLG---VQTVDLFGPVTVAIIG 158

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ + AA+ AE+VR G+++V RGQ+EAA ALGL+  +  R ++LPQAMRSI+PP  +  +
Sbjct: 159 LTLHEAAYAAEVVRGGILSVDRGQIEAAQALGLSRWRRWRRIVLPQAMRSIVPPAGNMLI 218

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             LK +S+   +   DL+     I +QT Q I ++++    Y  ++ +++L  + +    
Sbjct: 219 GTLKGTSIVSVIAVQDLLYSTQLIYHQTYQVIPLLMVATLWYTVVTSVLSLGQHYVERHY 278

Query: 393 ALK 395
           A  
Sbjct: 279 ARG 281



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 35/79 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    M     +GTL+   RLSAN ++  +   YV +FR+IP LV +   +
Sbjct: 72  LRGLWLTLWLTAVVMALGFALGTLLAVFRLSANPVLRAVSWGYVWLFRSIPILVQLLLWF 131

Query: 150 KSVLSVLPIPDHSIVLPFG 168
                   +     V  FG
Sbjct: 132 NIGALYPRVLGVQTVDLFG 150


>gi|303234492|ref|ZP_07321129.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
 gi|302494326|gb|EFL54095.1| ABC transporter, permease protein [Finegoldia magna BVS033A4]
          Length = 526

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 15/246 (6%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
            P    S V        +  L    +T+   +   +  F++GI++++           K 
Sbjct: 277 QPQGFLSKVKNIFNEYGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKF 336

Query: 216 GKALP-----LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              L      +L     +  G P +V   L Y   F   +    +            +  
Sbjct: 337 TYYLHKFINFILACYVEIFRGTPMMVQSMLIY---FGAKLYLGID-------MAPISAAL 386

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             +S  T A+++E+VR G+ +V  GQMEA  ALG+TH ++   V+LPQA+++I+P + ++
Sbjct: 387 FIVSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQAIKNILPSIGNE 446

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +   +L  V  +I   T    E   +   IY  L+  +   +  +  
Sbjct: 447 FVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLTFSLTRILLYIEK 506

Query: 391 KIALKE 396
           K   KE
Sbjct: 507 KSNNKE 512



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 12/79 (15%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR------------LSANKLVAWICRVY 132
           Y +  L G + T ++A    I   +IG LV   R               +K + +I   Y
Sbjct: 292 YGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKFTYYLHKFINFILACY 351

Query: 133 VEVFRNIPPLVVIFFLYKS 151
           VE+FR  P +V    +Y  
Sbjct: 352 VEIFRGTPMMVQSMLIYFG 370


>gi|239907731|ref|YP_002954472.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239797597|dbj|BAH76586.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 270

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 113/234 (48%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L F      R   F    +    ++ V +  L +V+ L    L R    K    +   Y+
Sbjct: 52  LYFKPDPYLRIFKFIPDGILVTFQVTVSAIALALVIGLITG-LGRISRNKYINLVASTYV 110

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G+P LV +   Y              +G     P+ ++  I++S    A++ E+
Sbjct: 111 E--VVRGVPLLVQLFYIYY------------ALGRVVHVPDLLAAVISMSVCYGAYMGEV 156

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ A+  GQ EAA +LG T  +    V+LPQA R+I+PP+ ++++ LLK++SL   +
Sbjct: 157 FRAGITAIAVGQTEAARSLGFTRSQTMYYVILPQAWRTILPPVGNEFIALLKDTSLVSIL 216

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ADL+  G    +++    E   +   +YL ++++++  ++ +  +++   K+
Sbjct: 217 GVADLLRRGREFASESFLYFETFTMVAVVYLIITLILSKLVSFMEERLSHHVKR 270



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 3/92 (3%)

Query: 72  IDQGIVPYTSDSSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           I  G + Y     Y         G + TF +  S +  A +IG + G GR+S NK +  +
Sbjct: 46  ITLGCLLYFKPDPYLRIFKFIPDGILVTFQVTVSAIALALVIGLITGLGRISRNKYINLV 105

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
              YVEV R +P LV +F++Y ++  V+ +PD
Sbjct: 106 ASTYVEVVRGVPLLVQLFYIYYALGRVVHVPD 137


>gi|169824809|ref|YP_001692420.1| amino acid ABC transporter permease [Finegoldia magna ATCC 29328]
 gi|167831614|dbj|BAG08530.1| amino acid ABC transporter permease protein [Finegoldia magna ATCC
           29328]
          Length = 526

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 104/246 (42%), Gaps = 15/246 (6%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
            P    S V        +  L    +T+   +   +  F++GI++++           K 
Sbjct: 277 QPQGFLSKVKSIFNEYGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKF 336

Query: 216 GKALP-----LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              L      +L     +  G P +V   L Y   F   +    +            +  
Sbjct: 337 TYYLHKFINFILACYVEIFRGTPMMVQSMLIY---FGAKLYLGID-------MAPISAAL 386

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             +S  T A+++E+VR G+ +V  GQMEA  ALG+TH ++   V+LPQA+++I+P + ++
Sbjct: 387 FIVSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHSQSMINVILPQAIKNILPSIGNE 446

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +   +L  V  +I   T    E   +   IY  L+  +   +  +  
Sbjct: 447 FVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLTFSLTRILLYIEK 506

Query: 391 KIALKE 396
           K   KE
Sbjct: 507 KSNNKE 512



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 12/79 (15%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA------------NKLVAWICRVY 132
           Y +  L G + T ++A    I   +IG LV   R               +K + +I   Y
Sbjct: 292 YGSLFLKGALMTLFIASVSTIIGFLIGILVAVIRNMKLDKDKNKFTYYLHKFINFILACY 351

Query: 133 VEVFRNIPPLVVIFFLYKS 151
           VE+FR  P +V    +Y  
Sbjct: 352 VEIFRGTPMMVQSMLIYFG 370


>gi|71910050|ref|YP_281600.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS5005]
 gi|71852832|gb|AAZ50855.1| ABC transporter amino acid-binding protein/amino acid ABC
           transporter permease protein [Streptococcus pyogenes
           MGAS5005]
          Length = 522

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRYIERRF 502



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|229591696|ref|YP_002873815.1| putative ABC transporter ATP-binding protein [Pseudomonas
           fluorescens SBW25]
 gi|229363562|emb|CAY50838.1| putative ABC transport system, ATP-binding protein [Pseudomonas
           fluorescens SBW25]
          Length = 505

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   FG+  +          +  +   +V S  LG +L+L     ++         
Sbjct: 1   MTFDWNYMFGLLADAEFWRATWTVIKLSTLTWVLSIGLGFLLAL-----AKQSKHGLLSV 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               YI  F    LP LVL+   Y L    P          + ++  F S  +AL     
Sbjct: 56  PARGYIWLF--RSLPLLVLLIFIYNLPQALPG-------TSAVLADPFWSGLLALVICET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R GL+++P+GQ EAA ALGL        V++PQA+R  +P L ++Y++++K +
Sbjct: 107 AYVAEIHRGGLLSIPKGQGEAARALGLKFFGTQWRVVIPQALRVALPSLANEYISIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +   +++ VG  + +Q    IE +    F Y+ +  +    + RL   + + ++
Sbjct: 167 SLVSVISLTEILMVGQRLYSQNFLVIETMAAVAFFYVFIVTVFDFLLKRLERFLDVNQR 225



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 71/194 (36%), Gaps = 8/194 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                     L+    + +  +G L+   + S + L++   R Y+ +FR++P LV++ F+
Sbjct: 17  FWRATWTVIKLSTLTWVLSIGLGFLLALAKQSKHGLLSVPARGYIWLFRSLPLLVLLIFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS------FVLGIVLSL 202
           Y  +   LP     +  PF   L    +       + +    +            + L  
Sbjct: 77  YN-LPQALPGTSAVLADPFWSGLLALVICETAYVAEIHRGGLLSIPKGQGEAARALGLKF 135

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGST 261
           F T+      +    ALP L      I  L +LV +I+L   L   + +  Q   +  + 
Sbjct: 136 FGTQWRVVIPQALRVALPSLANEYISIVKLTSLVSVISLTEILMVGQRLYSQNFLVIETM 195

Query: 262 VSPEFMSLYIALSC 275
            +  F  ++I    
Sbjct: 196 AAVAFFYVFIVTVF 209


>gi|323126570|gb|ADX23867.1| putative glutamine-binding periplasmic protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 522

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAVLGQKLFGWLLTIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRYIERRF 502



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAVLGQKLFGWLLTIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|322386833|ref|ZP_08060457.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269115|gb|EFX52051.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 542

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 110/262 (41%), Gaps = 21/262 (8%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           ++ +N P          +  + +          F        L    LT+  +    +  
Sbjct: 280 QMIKNQPVDTDTDDAEDTFFNKVFKIWKENWPQF--------LRGAGLTLLISITGTIAG 331

Query: 194 FVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKYQLHFDKPV 250
             +G+++ ++ T  +S++      + L   +++ ++    G P +V   + Y        
Sbjct: 332 LFIGLLIGVYRTAPISKNKALAFLQKLFGWFLNVYIEIFRGTPMIVQSMVIYYGTAQA-- 389

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                            +    +S  T A+++EIVR G+ AV +GQ EAA ALG+TH + 
Sbjct: 390 --------FGISIDRTAAAIFIVSINTGAYMSEIVRGGIFAVDKGQFEAATALGMTHGQT 441

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQ +R+I+P   ++++  +K++S+   +   +L   G TI  QT Q  +   I 
Sbjct: 442 MRKVVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTIATQTYQYFQTFTII 501

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             IY  L+  +   +  +  K 
Sbjct: 502 AVIYFVLTFTVTRILRFIEQKF 523



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++ +G I    IG L+G  R +            KL  W   VY+E+
Sbjct: 310 WPQFLRGAGLTLLISITGTIAGLFIGLLIGVYRTAPISKNKALAFLQKLFGWFLNVYIEI 369

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 370 FRGTPMIVQSMVIYYGTAQAF 390


>gi|218779109|ref|YP_002430427.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfatibacillum alkenivorans AK-01]
 gi|218760493|gb|ACL02959.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfatibacillum alkenivorans AK-01]
          Length = 267

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 109/228 (47%), Gaps = 15/228 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L F    +    ++   S +L I++  F   L R         L   Y+   ++ 
Sbjct: 55  KYRNILVFLKDGIYVTFQVTFSSILLAIIIGFFTG-LGRLSKIWIVNILASTYVE--IVR 111

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV +   Y              +G     P+ ++  IA+S    A++ E+ R+G+ 
Sbjct: 112 GIPLLVQLFYLYY------------ALGKFIQVPDKLAAIIAMSICYGAYMGEVFRAGID 159

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EAA +LG    +    V+LPQA R+I+PP+ ++++ LLK++SL   +G ADL+
Sbjct: 160 SIDKGQTEAARSLGFNGAQTMMYVILPQAWRTILPPVGNEFIALLKDTSLVSILGVADLL 219

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G    + +    E   +   +YL ++++++  ++ +  ++   +++
Sbjct: 220 RRGREYASTSFDYFETYTMVAVVYLIITLILSKLVSIMEERLGQHDQR 267



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF + FS ++ A IIG   G GRLS   +V  +   YVE+ R IP LV +F+LY +
Sbjct: 66  GIYVTFQVTFSSILLAIIIGFFTGLGRLSKIWIVNILASTYVEIVRGIPLLVQLFYLYYA 125

Query: 152 VLSVLPIPD 160
           +   + +PD
Sbjct: 126 LGKFIQVPD 134


>gi|21909739|ref|NP_664007.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS315]
 gi|28895121|ref|NP_801471.1| glutamine-binding periplasmic protein [Streptococcus pyogenes
           SSI-1]
 gi|21903923|gb|AAM78810.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS315]
 gi|28810366|dbj|BAC63304.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes SSI-1]
          Length = 522

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRYIERRF 502



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|317489459|ref|ZP_07947969.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
 gi|316911388|gb|EFV32987.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
          Length = 458

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 115/259 (44%), Gaps = 15/259 (5%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P   +  +L           +  + L F   +    +            + + SF L I 
Sbjct: 176 PAEQLSTWLGMQDWVKAWNSNKFLHLFFDPSIIVTSVPVVFSGWLIAIALVIVSFPLAIP 235

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           + L      R    +  +AL   YI+  ++ G P  + I + +   F  P+L        
Sbjct: 236 IGLL-WSFMRMAKSRVPRALGATYIN--IVRGTPLFLQIYIAF---FGLPLL-------- 281

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                 F+   I L   ++A++AEI R+G+ ++  GQ EAA +LG+   +    V++PQ 
Sbjct: 282 GIKMDLFVLGAIVLVLNSSAYLAEIFRAGIQSINGGQFEAARSLGMNGAQTMFYVIIPQT 341

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R +IP +TS+++ + K++SL  AVG  +++    TI   TG  +   ++    YL ++I
Sbjct: 342 VRRVIPTMTSEFILMYKDTSLLAAVGVMEIMMYAKTITAATGN-VTPYIVAAGFYLIVTI 400

Query: 380 MIALFMNRLNAKIALKEKK 398
            +   +N +  ++A   KK
Sbjct: 401 PMTKLINSMEQRMAGGRKK 419



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 28/73 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G++    L       A  IG L    R++ +++   +   Y+ + R  P  + I+ 
Sbjct: 214 VVFSGWLIAIALVIVSFPLAIPIGLLWSFMRMAKSRVPRALGATYINIVRGTPLFLQIYI 273

Query: 148 LYKSVLSVLPIPD 160
            +  +  +    D
Sbjct: 274 AFFGLPLLGIKMD 286


>gi|282861062|ref|ZP_06270127.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282563720|gb|EFB69257.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 322

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 7/280 (2%)

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
            V+    V  E  R +P      ++   V+  L            +  +         T+
Sbjct: 18  PVSGPTTVAPETIRAVPVRHYGRWISAVVVIALLAALVYAFSQGNIQWHAVQDKLFDDTV 77

Query: 184 DTNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              A   +   VL +VL +    +    R         +  LYI  F   G P  V + L
Sbjct: 78  LAGAGRTLMISVLAMVLGVVLGVVLAVMRLSKNPVTSWVAWLYIWFF--RGTPVYVQLLL 135

Query: 241 KYQLHFDKPVLGQFNF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + L    P+L          + V   FM   + L    AA++AEI R+G+ +V  GQ E
Sbjct: 136 WFNLALVFPILNIPFVYKDEMTDVMTPFMCALLGLGLNEAAYMAEICRAGIQSVDEGQTE 195

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A+ ALG+T  K  R V+LPQA+R IIPP  ++++N+LK SSL  AV + +L+     I +
Sbjct: 196 ASHALGMTQAKTMRRVVLPQALRVIIPPTGNEFINMLKTSSLVYAVTYNELLRSTSQIGS 255

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +E++ +    Y+ ++ + ++    L  + A    +
Sbjct: 256 TSYAVMEMLFVASIWYIVMTSIFSVGQYYLERRYARGSLR 295



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 2/110 (1%)

Query: 70  FEIDQGIVPY--TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + +    D  +   +L G   T  ++   M+   ++G ++   RLS N + +W
Sbjct: 56  YAFSQGNIQWHAVQDKLFDDTVLAGAGRTLMISVLAMVLGVVLGVVLAVMRLSKNPVTSW 115

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +  +Y+  FR  P  V +   +   L    +    +       +    + 
Sbjct: 116 VAWLYIWFFRGTPVYVQLLLWFNLALVFPILNIPFVYKDEMTDVMTPFMC 165


>gi|257876242|ref|ZP_05655895.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257810408|gb|EEV39228.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 529

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 15/214 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I + S ++G+++ L              + LPL        F      L+ +  ++
Sbjct: 309 LTLFIAILSTIIGLIIGLLVG---------IFRTLPLSENPVGRFFQRIVNGLLTIYIEV 359

Query: 245 HFDKPVLGQFNFIGGST------VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
               P++ Q   I   T           ++  + +S  T A+++EIVR G+ AV  GQ E
Sbjct: 360 FRGTPMMVQAMVIFYGTALAFGVSMNRTLAAVLIVSINTGAYMSEIVRGGIFAVDDGQFE 419

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A+G+TH +    V+LPQ MR+I+P   ++ +  +K++++   +  ADL   G +   
Sbjct: 420 AAQAIGMTHWQTMIKVVLPQVMRNILPATGNEIIINIKDTAVLSVISVADLFFQGTSAAG 479

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              Q  +   I   IYL L+I     +  +  K+
Sbjct: 480 TNFQYFQTFAIIGVIYLVLTISATQILRFVERKM 513



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 15/108 (13%)

Query: 64  LSERA---GFEIDQGIVPYTSD--SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
           L + A   G   DQG++         Y    L G   T ++A    I   IIG LVG  R
Sbjct: 273 LDQPADASGETADQGLIADFKKIIDDYGMLFLRGAGLTLFIAILSTIIGLIIGLLVGIFR 332

Query: 119 LSAN----------KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
                         ++V  +  +Y+EVFR  P +V    ++       
Sbjct: 333 TLPLSENPVGRFFQRIVNGLLTIYIEVFRGTPMMVQAMVIFYGTALAF 380


>gi|19745409|ref|NP_606545.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS8232]
 gi|19747518|gb|AAL97044.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes MGAS8232]
          Length = 522

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRYIERRF 502



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|313893707|ref|ZP_07827274.1| glutamine ABC transporter, permease protein GlnP [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441721|gb|EFR60146.1| glutamine ABC transporter, permease protein GlnP [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 218

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 114/231 (49%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   L    L           +I   S   G  + L    L+        + L   Y+
Sbjct: 1   MSFNWGLIADNLPLLLQGALVTVEITAMSVGCGFFIGLLV-SLANLSKFSLVRLLAKCYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P LV I L Y   F  P+      I G  + P F++   A S  + A+++EI
Sbjct: 60  D--IIRGTPLLVQIFLIY---FALPM------ITGQRIDP-FIAAVTACSINSGAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEA  +LGLT  +  R +++PQA ++IIPPL ++++ +LK+SSL   +
Sbjct: 108 FRAGIQSIDKGQMEAGRSLGLTWGQTMRYIIMPQAFKAIIPPLGNEFIAMLKDSSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           GF +L   G  II +T  + EI      IYL +++ I+  +  L  K ++K
Sbjct: 168 GFEELTRRGQLIIAKTYASFEIWGTVAVIYLIMTVTISQLVGYLERKYSIK 218



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 33/76 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    +     IG LV    LS   LV  + + YV++ R  P LV IF +
Sbjct: 15  LLQGALVTVEITAMSVGCGFFIGLLVSLANLSKFSLVRLLAKCYVDIIRGTPLLVQIFLI 74

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++  +        +
Sbjct: 75  YFALPMITGQRIDPFI 90


>gi|306828018|ref|ZP_07461284.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|304429799|gb|EFM32842.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 522

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 502



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|253701871|ref|YP_003023060.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           sp. M21]
 gi|251776721|gb|ACT19302.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M21]
          Length = 339

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
             + + +     P + + L   +    + L    +T+     I V S + G++++L    
Sbjct: 107 LNFIASVEKEQKPRYVVFLEDCLRFLPQLLKGAMMTITLVVCIIVISPLGGLLIAL---- 162

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    K    L  L+I  F   G P L+ +   Y   +  P L       G T  P F
Sbjct: 163 -GRISTFKPVSGLCWLFIWLF--RGTPLLLQLFFIY---YGLPSL-------GVTFKP-F 208

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L    +A++ EI+R G+ ++  GQMEAA A+G+++ +A R V++PQ  + ++PP
Sbjct: 209 TAAILGLGLNYSAYLGEIIRGGIQSIEHGQMEAAKAIGMSYWQAMRRVIIPQTYKRLMPP 268

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + ++++ L+K+++L   +   +L+     + N     +  +++  FIYL  + +      
Sbjct: 269 IGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFN-VTALILAAFIYLLFTTIFTFIFE 327

Query: 387 RLNAKIALKEKK 398
           ++  +  + E +
Sbjct: 328 KIEIRAGIYENR 339



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 44/90 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G + T  L    ++ + + G L+  GR+S  K V+ +C +++ +FR  P L+
Sbjct: 130 RFLPQLLKGAMMTITLVVCIIVISPLGGLLIALGRISTFKPVSGLCWLFIWLFRGTPLLL 189

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            +FF+Y  + S+            G+ LN 
Sbjct: 190 QLFFIYYGLPSLGVTFKPFTAAILGLGLNY 219


>gi|257870618|ref|ZP_05650271.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804782|gb|EEV33604.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 528

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-----HFHEKTGKALPLLYISTFLI 229
            L    LT+       V   ++G+++ +F T  +       F +K   AL  +YI  F  
Sbjct: 303 FLRGAGLTLFIAIVSTVVGLLIGLLVGVFRTLPAAENPVSRFFQKLINALLTIYIEVF-- 360

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V   + +              +         ++  + +S  T A+++EIVR G+
Sbjct: 361 RGTPMMVQAMVIFYG----------TALAFGVSMNRTIAALLIVSINTGAYMSEIVRGGI 410

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV  GQ EAA A+G+TH +    V+LPQ MR+I+P   ++ +  +K++++   +  ADL
Sbjct: 411 FAVDDGQFEAAQAIGMTHWQTMFKVVLPQVMRNILPATGNEIIINIKDTAVLSVISVADL 470

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G +      Q  +   I   IYL L+I     +  +  K+
Sbjct: 471 FFQGTSAAGTNYQYFQTFAIIGAIYLVLTISATQILRFVERKM 513



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 12/103 (11%)

Query: 66  ERAGFEIDQGIVPYTSD--SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN- 122
           + +G   +QG++         Y +  L G   T ++A    +   +IG LVG  R     
Sbjct: 278 DTSGDSANQGLLADFKKIIDDYGSLFLRGAGLTLFIAIVSTVVGLLIGLLVGVFRTLPAA 337

Query: 123 ---------KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
                    KL+  +  +Y+EVFR  P +V    ++       
Sbjct: 338 ENPVSRFFQKLINALLTIYIEVFRGTPMMVQAMVIFYGTALAF 380


>gi|323142137|ref|ZP_08076982.1| glutamine ABC transporter, permease protein GlnP
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413397|gb|EFY04271.1| glutamine ABC transporter, permease protein GlnP
           [Phascolarctobacterium sp. YIT 12067]
          Length = 216

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 17/220 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T++  A    F  ++G ++ +     +R    K  +    +Y+    I G P L
Sbjct: 14  LAGAAITVEITAMSVTFGLLIGCMIGI-----ARLCSIKPLRYFANVYVDF--IRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I L Y              I GS V P F++   A S  + A++AEI R+G+ ++ +G
Sbjct: 67  VQIFLVYF---------ALPNIIGSRVDP-FVAAISACSINSGAYVAEIFRAGIQSIDKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEA  +LG+T  +  R +++PQA + IIPPL ++++ +LK+SSL   +GF +L   G  
Sbjct: 117 QMEAGRSLGMTWAQTMRYIIMPQAFKRIIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQL 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           II +T  + EI +    IYL ++  +A F   L  +   K
Sbjct: 177 IIARTYASFEIWMAVAIIYLIMTFAVARFTGYLERRFDTK 216



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 36/76 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +    +IG ++G  RL + K + +   VYV+  R  P LV IF +
Sbjct: 13  LLAGAAITVEITAMSVTFGLLIGCMIGIARLCSIKPLRYFANVYVDFIRGTPLLVQIFLV 72

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++ +++       V
Sbjct: 73  YFALPNIIGSRVDPFV 88


>gi|257066001|ref|YP_003152257.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
 gi|256797881|gb|ACV28536.1| polar amino acid ABC transporter, inner membrane subunit
           [Anaerococcus prevotii DSM 20548]
          Length = 490

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 6/219 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T        + SF+LG++++L      R      G  L         I  
Sbjct: 273 YKYLLDGLKITAKVTVCALILSFILGLIIALV-----RSAKIDIGDELSGFPKFLLTIID 327

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
               + +++         +L  FN I    +    +   I+ +  ++A++AE+ R G+ +
Sbjct: 328 KIFALFVSIIRGTPSTIQLLIMFNVI-LVNLDNLVLVAIISFALNSSAYMAELFRGGINS 386

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +G+ EAA +LGL++ +  + V++PQA+++ +P L ++ + L K +S+A  +G ADL  
Sbjct: 387 VSKGEKEAARSLGLSNLQMMKKVVMPQAVKNSLPALGNEVITLFKETSIAGFIGLADLTR 446

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
               +I+QT  A         IYL + +++      L  
Sbjct: 447 GASIVISQTFDAATAYFSAAIIYLVIVLVMEKIFKELEK 485


>gi|323702153|ref|ZP_08113820.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532840|gb|EGB22712.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum nigrificans DSM 574]
          Length = 221

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 120/232 (51%), Gaps = 14/232 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              + +    L    + +    ++   +   G ++ LF   L+R       K+L + Y  
Sbjct: 1   MDTLQVIFDALPALLVGLKLTIELTALAVFFGCIIGLFI-ALARISGIGILKSLAVAYTE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P LV + + +   F  P L              F    +A S  + A++AEI 
Sbjct: 60  FF--RGTPLLVQLFMVF---FGLPQLIG-------HPVNAFSVAVVACSLNSGAYVAEIF 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++ RGQMEAA +LG+T+ +A R ++LPQA + +IPPL ++++ ++K++SL   +G
Sbjct: 108 RAGIQSIERGQMEAARSLGMTYAQAMRYIILPQAFKRVIPPLGNEFIAMMKDTSLVSVIG 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA-LFMNRLNAKIALKE 396
            A+L   G  II  T +AIEI L    IYL ++++I+  F++R+  ++   +
Sbjct: 168 LAELARTGQLIIATTYRAIEIWLAVALIYLIMTLLISHFFVHRMERRLKTSD 219



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 36/78 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+LVG   T  L    +    IIG  +   R+S   ++  +   Y E FR  P LV +F 
Sbjct: 13  ALLVGLKLTIELTALAVFFGCIIGLFIALARISGIGILKSLAVAYTEFFRGTPLLVQLFM 72

Query: 148 LYKSVLSVLPIPDHSIVL 165
           ++  +  ++  P ++  +
Sbjct: 73  VFFGLPQLIGHPVNAFSV 90


>gi|294101083|ref|YP_003552941.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616063|gb|ADE56217.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 520

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 14/226 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L           K+ + S VL I L L    +++ F       L + YI    I G
Sbjct: 290 YASFLPILGKAAIVTMKVSIASMVLAIFLGLLL-AMTKIFGPTLLSRLAIGYIEA--IRG 346

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L+ +   +   +  P +       G  +SP F +  + L    AA+ AE  R+GL++
Sbjct: 347 TPVLIQLFFIF---YGLPNI-------GIKLSP-FFAGILGLGLNYAAYEAENYRAGLLS 395

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPR QME A+ALG+T  +A R V+LPQA+R  +PP+T+ +++LLK+SSL   +   DL  
Sbjct: 396 VPRQQMEGALALGMTRWQALRHVVLPQALRVALPPVTNDFISLLKDSSLVSVITMVDLTK 455

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G +           +I   IY  L +           K+A+  K
Sbjct: 456 AYGQLATTYYDYFGTGIIVAIIYFLLGLPFVRLARWTEKKMAVAVK 501



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+   +    + T  ++ + M+ A  +G L+   ++    L++ +   Y+E  R  P L+
Sbjct: 292 SFLPILGKAAIVTMKVSIASMVLAIFLGLLLAMTKIFGPTLLSRLAIGYIEAIRGTPVLI 351

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            +FF++  + ++            G+ LN                + V    +   L+L 
Sbjct: 352 QLFFIFYGLPNIGIKLSPFFAGILGLGLNYAAYEAENYRAGL---LSVPRQQMEGALALG 408

Query: 204 ATRLSRHFHEKTGKALPL 221
            TR     H    +AL +
Sbjct: 409 MTRWQALRHVVLPQALRV 426


>gi|322391787|ref|ZP_08065252.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus peroris ATCC 700780]
 gi|321145267|gb|EFX40663.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus peroris ATCC 700780]
          Length = 481

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 96/172 (55%), Gaps = 1/172 (0%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  IS   +  +  + L+ L   + +  P   + +  G  +   +F++  IALS  +AA+
Sbjct: 310 LRLISEIFVDVIRGIPLMILAAFIFWGIPNFIE-SLTGQQSPINDFVAGTIALSLNSAAY 368

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEIVR G+ AVP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++
Sbjct: 369 IAEIVRGGIKAVPVGQMEASRSLGISYGKTMRKIVLPQATKLMLPNFVNQFVIALKDTTI 428

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             A+G  +L   G  II +  Q+ ++  I    YL +  ++     RL  +I
Sbjct: 429 VSAIGLVELFQTGKIIIARNYQSFKMYAILAVFYLVIITLLTRLAKRLEKRI 480


>gi|320530119|ref|ZP_08031189.1| putative glutamine ABC transporter permease protein [Selenomonas
           artemidis F0399]
 gi|320137552|gb|EFW29464.1| putative glutamine ABC transporter permease protein [Selenomonas
           artemidis F0399]
          Length = 219

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 13/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I V S  +G ++ L    ++R    K  + L  +Y+  F   G P LV I L Y  
Sbjct: 21  VTIQITVLSTTIGFIVGLIV-AVARISKLKLLRILAEVYVEFF--RGTPLLVQIFLFY-- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PV      I G  + P F++   A    + A++AEI R+G+ +V  GQMEA  +LG
Sbjct: 76  -FALPV------ITGQRIDP-FIAAISACGINSGAYVAEIFRAGIQSVDAGQMEAGRSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R +++PQA + +IPPL ++++ +LK+SSL   +GF +L   G  II +T  ++
Sbjct: 128 MTWIQTMRYIIVPQAFKRVIPPLGNEFIAMLKDSSLVSVIGFEELTRRGQLIIAKTYGSM 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI L    IYL++++ I+  +  L  +  + +
Sbjct: 188 EIWLSVAVIYLAMTLTISRLVAYLERRYRVND 219



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  +         I+G +V   R+S  KL+  +  VYVE FR  P LV IF  
Sbjct: 15  LLVGAGVTIQITVLSTTIGFIVGLIVAVARISKLKLLRILAEVYVEFFRGTPLLVQIFLF 74

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 75  YFALP 79


>gi|257865888|ref|ZP_05645541.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC30]
 gi|257875515|ref|ZP_05655168.1| polar amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|325569898|ref|ZP_08145892.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus casseliflavus ATCC 12755]
 gi|257799822|gb|EEV28874.1| binding-protein-dependent transport system inner membrane component
           [Enterococcus casseliflavus EC30]
 gi|257809681|gb|EEV38501.1| polar amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|325157021|gb|EGC69189.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus casseliflavus ATCC 12755]
          Length = 229

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 7/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F        LS   +T+  +    +F  +LG++ +L      +       +     
Sbjct: 1   MDLSFLAIYYPYFLSGVVITIVISIITVIFGTILGVIFALM-----KLSKVTPLRWFANA 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   +I G P LV I + + L      L   +    S          IALS  + A++A
Sbjct: 56  YIE--VIRGTPMLVQILIAFGLLQGMFALPTVSIGVLSLDFGRLFPGIIALSLNSGAYVA 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV  GQ EAA +LGL   +  R V+LPQA+R+I+PPL ++++ L+K+SSL  
Sbjct: 114 EIVRGGINAVDYGQTEAAGSLGLRPFQTMRYVVLPQALRNILPPLGNEFIVLIKDSSLLS 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  +L++    ++  + Q +    +   IY  L+   +  ++    K+    ++
Sbjct: 174 TIGIYELMNSAQIVVTSSFQPLTPFYVAAVIYFILTFTTSRLLSLWEKKLGKGYRR 229



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G V T  ++   +I  TI+G +    +LS    + W    Y+EV R  P LV 
Sbjct: 9   YYPYFLSGVVITIVISIITVIFGTILGVIFALMKLSKVTPLRWFANAYIEVIRGTPMLVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +  +  +P 
Sbjct: 69  ILIAFGLLQGMFALPT 84


>gi|57865359|ref|YP_189560.1| amino acid ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|251811884|ref|ZP_04826357.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875171|ref|ZP_06284044.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|57636017|gb|AAW52805.1| amino acid ABC transporter, permease protein [Staphylococcus
           epidermidis RP62A]
 gi|251804681|gb|EES57338.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295936|gb|EFA88457.1| ABC transporter, permease protein [Staphylococcus epidermidis
           SK135]
 gi|329734620|gb|EGG70931.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU045]
          Length = 239

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   N     T++P  ++  I LS    A+ +EI+R G++++P+GQ EAA ++G+ +R
Sbjct: 91  GRLVTNNADNQWTLAP-VIAAVIGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I L
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYL 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      ++I    +
Sbjct: 210 LVALMYWVVCFVISIIQGWYESRIERGYR 238



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   II       R+S +KL+  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFILGLIIALFTALMRISTSKLLRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  ++    + +      +   +L +   A   +   +L I
Sbjct: 91  GRLVTNNADNQWTLAPVIAAVIGLSLNVGAYASEIIRGGILSI 133


>gi|297518685|ref|ZP_06937071.1| predicted amino-acid transporter subunit [Escherichia coli OP50]
          Length = 208

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 104/207 (50%), Positives = 141/207 (68%), Gaps = 1/207 (0%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
            F+ + V+ IVLS+   R ++ +  KTG+      I+  LI GLP L        LH+D 
Sbjct: 1   AFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAAVLIIGLPLLAQWLFGAALHWDV 60

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L  FNF GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + 
Sbjct: 61  PALRGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLPNP 120

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIEII 367
              R V++PQA+R IIPPLTSQYLN++KNSSLA A+G+ D+VS+  GT++NQTGQAIE I
Sbjct: 121 VTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGYPDMVSLFAGTVLNQTGQAIETI 180

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + M +YL +S+ I+L MN  N +IA+
Sbjct: 181 AMTMSVYLIISLTISLLMNIYNRRIAI 207


>gi|191639757|ref|YP_001988923.1| ArpJ protein [Lactobacillus casei BL23]
 gi|190714059|emb|CAQ68065.1| ArpJ protein [Lactobacillus casei BL23]
 gi|327383870|gb|AEA55346.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei LC2W]
 gi|327387051|gb|AEA58525.1| Amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus casei BD-II]
          Length = 482

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 18/232 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F     N  L     T+        F  V+G +L+L      +  H    KA+ 
Sbjct: 268 QDQNQSFWAKYGNYFLRGALYTLIFAVLTVFFGTVIGTLLALM-----KLSHSWFAKAIA 322

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI    I G P LV   + +           F           F++  IA++  + A+
Sbjct: 323 NVYIEF--IRGTPLLVQAFIVF-----------FGTQILGLDLSAFVAGAIAMAINSGAY 369

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ +VP GQ EAA +LGL   +A R V+LPQA ++I P L ++++  +K SS+
Sbjct: 370 VAEIIRGGINSVPIGQTEAARSLGLHQGQAMRYVILPQATKNIWPALGNEFVTDIKESSV 429

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G  +L+  G  +   + +    +++ + +Y  ++  ++  +  +  + 
Sbjct: 430 LSVIGATELMFEGTVVQGASFKPFLPLVVVVILYFIMTFTLSRLLRLIEKRF 481



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G + T   A   +   T+IGTL+   +LS +     I  VY+E  R  P LV 
Sbjct: 278 YGNYFLRGALYTLIFAVLTVFFGTVIGTLLALMKLSHSWFAKAIANVYIEFIRGTPLLVQ 337

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 338 AFIVFFGT 345


>gi|330719318|ref|ZP_08313918.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc fallax KCTC 3537]
          Length = 482

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 13/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ V + +L  +  +F   L      K  + +    I  F       L L+ L + ++ 
Sbjct: 288 IKLTVLAIILASIWGIFLGILG-ISETKWLRGVSTTVIYIFR-----GLPLMVLAFFIYI 341

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +         T  P F++  I L     A+ A  VR G  AV +GQMEAA +LGL 
Sbjct: 342 GLPTVIG-------TKVPAFLAGIITLVLNEGAYTAAFVRGGFEAVEKGQMEAARSLGLP 394

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + KA R V++PQ +R ++P   +Q++  LK++S+  A+G  +L   G  I+ +  Q   +
Sbjct: 395 YGKAMRKVIVPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGTLIVARNSQGFRV 454

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I   +YL +  ++    N +  ++ 
Sbjct: 455 WAIIAVMYLIVITLLTWLSNWVEKRMK 481



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +   A + G + T  L    +I A+I G  +G   +S  K +  +    + +FR +P +V
Sbjct: 275 TNRKAFIDGLIETIKLTVLAIILASIWGIFLGILGISETKWLRGVSTTVIYIFRGLPLMV 334

Query: 144 VIFFLYKSVLSV 155
           + FF+Y  + +V
Sbjct: 335 LAFFIYIGLPTV 346


>gi|221209883|ref|ZP_03582864.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
 gi|221170571|gb|EEE03037.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
          Length = 500

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                     +  +        + +  +  ++    +LG  ++L     +R  H+   K 
Sbjct: 1   MQFDWHYALQLLWDKDFWRACVVVVKLSVSVWALGVLLGFPVAL-----ARQSHQPALKR 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    LP LVL+   Y L    P          + +S  F +  IA+     
Sbjct: 56  AAAVYIWFF--RSLPLLVLLVFIYNLPQVFPA-------TSAVLSDPFTAGLIAMVFSET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R G+++VPRGQ+EA  ALG+      R++++PQA+R  +P L ++++ ++K +
Sbjct: 107 AYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQAIRIALPALANEFITIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q     E +L   F Y+ +  + +  +  L   + +  +
Sbjct: 167 SLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLLGYLERHLDVSRR 225



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 8/179 (4%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
                ++G  V   R S    +     VY+  FR++P LV++ F+Y  +  V P     +
Sbjct: 32  WALGVLLGFPVALARQSHQPALKRAAAVYIWFFRSLPLLVLLVFIYN-LPQVFPATSAVL 90

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFS----FVLGIVLSLFATRLSRHF--HEKTGK 217
             PF   L     S      + +    +         G  L +  T + R     +    
Sbjct: 91  SDPFTAGLIAMVFSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQAIRI 150

Query: 218 ALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ALP L      I  L +LV +I+L   L   + +  Q   +  + ++  F  + I    
Sbjct: 151 ALPALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVF 209


>gi|116617768|ref|YP_818139.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096615|gb|ABJ61766.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 490

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 18/231 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F     N  +    LT+   A   V   VLG V +LF     +       + +  +Y+  
Sbjct: 278 FWAKYGNLFVKGTLLTLALAAVAVVLGIVLGTVFALF-----KLSPNAILRIIGNVYVE- 331

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV   + +           F           F +  +A+   +AA++AEI+R
Sbjct: 332 -YVRGTPLLVQAFMVF-----------FGTQVIGLNLSAFAAGALAMGLNSAAYVAEIIR 379

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQ EA+ +LGL+  K  R V+LPQA+++I+P L ++++ ++K  S+   +G 
Sbjct: 380 SGINSVDFGQTEASRSLGLSKGKTMRYVILPQAVKNILPALGNEFVTIIKEGSVVSVIGV 439

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L+   G +   + +    ++I   IY  L+  I+  +     ++    +
Sbjct: 440 GELMFQTGVVQGASFKPFFPLVIASLIYFVLTFGISRSLGYAEKRMNRSSR 490



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA   ++   ++GT+    +LS N ++  I  VYVE  R  P LV 
Sbjct: 282 YGNLFVKGTLLTLALAAVAVVLGIVLGTVFALFKLSPNAILRIIGNVYVEYVRGTPLLVQ 341

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 342 AFMVFFGT 349


>gi|308187411|ref|YP_003931542.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308057921|gb|ADO10093.1| putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 307

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  LVV+  +     S++  P     +    F     L    +T+   A   V  F  
Sbjct: 21  RWLSALVVLLCVVAMAHSMINNPRFEWQVIAENFTAPSILQGVLMTLQLTAISVVLGFAF 80

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKP 249
           G VL+L      R        A+   Y   F   G+P LV + L Y +           P
Sbjct: 81  GTVLALM-----RLSSNPVLVAVSWAYTWFF--RGVPMLVQLFLWYNIAALYPRIALSIP 133

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG+      + +   F +  IAL  + +A+ AEIVR+G+ +V  GQ+EAA ALG    +
Sbjct: 134 GLGELWSAQSNALVSPFSAAVIALVMHQSAYAAEIVRAGIQSVGNGQIEAARALGYRPAQ 193

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R  +LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T + I ++L+
Sbjct: 194 IFRHTVLPQAMRAIMPPAGNEIIGQLKTTAVVSVISLQDVLFSAQIIYQRTYEVIPLLLV 253

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++++    +         +
Sbjct: 254 ATLWYLLMTSVLSVGQYYVERYFGRGVTR 282



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 41/113 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L    ++     GT++   RLS+N ++  +   Y   FR +P LV +F  
Sbjct: 59  ILQGVLMTLQLTAISVVLGFAFGTVLALMRLSSNPVLVAVSWAYTWFFRGVPMLVQLFLW 118

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y        I      L       +  L  P         +   ++   IV +
Sbjct: 119 YNIAALYPRIALSIPGLGELWSAQSNALVSPFSAAVIALVMHQSAYAAEIVRA 171


>gi|295689320|ref|YP_003593013.1| polar amino acid ABC transporter inner membrane subunit
           [Caulobacter segnis ATCC 21756]
 gi|295431223|gb|ADG10395.1| polar amino acid ABC transporter, inner membrane subunit
           [Caulobacter segnis ATCC 21756]
          Length = 219

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V    +G+VL  F   L R       +    +Y+S F   G P LV + L Y    
Sbjct: 23  VLLSVIGMGVGVVLG-FGLALMRLSRTPLLRWPAGVYVSAF--RGTPLLVQLFLIYY--- 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L QF         P  ++  I  S   AA+  EI+RS + AV +GQ EAA  LG++
Sbjct: 77  ---GLPQFG-----IEMPALVAAGIGFSLNVAAYACEILRSAIAAVDKGQWEAATVLGMS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQA R+ + PL++ +++L+K++SLA  +   +L      I  +T +   +
Sbjct: 129 RGQTLRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQTQLITARTYEIFTM 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L    IY  +S ++A   +RL  + +   +
Sbjct: 189 YLAAAAIYWIVSTVLAAGQHRLERRASEGRR 219



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 35/84 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RLS   L+ W   VYV  FR  P LV +F +
Sbjct: 15  LLKGAGYTVLLSVIGMGVGVVLGFGLALMRLSRTPLLRWPAGVYVSAFRGTPLLVQLFLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +          +    G  LN
Sbjct: 75  YYGLPQFGIEMPALVAAGIGFSLN 98


>gi|329726529|gb|EGG62992.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU144]
 gi|329735014|gb|EGG71311.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU028]
          Length = 239

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   N     T++P  ++  I LS    A+ +EI+R G++++P+GQ EAA ++G+ +R
Sbjct: 91  GRLVTNNADNQWTLAP-VIAAVIGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I L
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYL 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      ++I    +
Sbjct: 210 LVALMYWVVCFIISIIQGWYESRIERGYR 238



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   II       R+S +KL+  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFILGLIIALFTALMRISTSKLLRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  ++    + +      +   +L +   A   +   +L I
Sbjct: 91  GRLVTNNADNQWTLAPVIAAVIGLSLNVGAYASEIIRGGILSI 133


>gi|150020367|ref|YP_001305721.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Thermosipho melanesiensis BI429]
 gi|149792888|gb|ABR30336.1| Ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Thermosipho melanesiensis BI429]
          Length = 216

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 14/221 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L F  L      K+  FS ++G+VL  F   + R    K       +Y+    + G P 
Sbjct: 10  NLPFLLLGAWDTLKLTFFSVLIGLVLGTFIG-MGRLSKIKAINIPSTVYVEF--LRGTPL 66

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I++ Y   F  P L              + +  +AL   + A+IAEIVR+G+ ++P+
Sbjct: 67  LVQISIVY---FGLPQL--------GIQLEAYPAAIVALGLNSGAYIAEIVRAGIQSIPK 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG+TH +  R ++LPQA ++I+P L ++++ L K+SSLA  +G  +L+  G 
Sbjct: 116 GQYEAARSLGMTHFQTMRYIILPQAFKNILPALGNEFITLTKDSSLASIIGVTELMRRGQ 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +I +T Q   I      IY  ++  I+  +     ++ + 
Sbjct: 176 FVITRTFQTFSIYFGIALIYFVMTFTISRLVRFAEKRMEIS 216



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G  +T  L F  ++   ++GT +G GRLS  K +     VYVE  R  P LV I  +
Sbjct: 14  LLLGAWDTLKLTFFSVLIGLVLGTFIGMGRLSKIKAINIPSTVYVEFLRGTPLLVQISIV 73

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 74  YFGLPQLGIQ 83


>gi|301629417|ref|XP_002943836.1| PREDICTED: hypothetical protein LOC100485408 [Xenopus (Silurana)
           tropicalis]
          Length = 502

 Score =  163 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 14/240 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                    G+  N          ++ + + ++   VLG  L+L     +R    +  + 
Sbjct: 1   MQFDWHYTLGLLWNGDFWRAVGTVVELSLETWLLGIVLGFFLAL-----ARQSELRWLRN 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    LP LVL+   Y L    P            +S  + +  IAL    A
Sbjct: 56  SAGVYIWFF--RSLPLLVLLIFVYNLPQVFPS-------TSVVLSNPYSAGLIALVLSEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI R GL+AV +GQ EA  ALG+ +R   RL+++PQA+R  +P L ++Y+ ++K +
Sbjct: 107 AYIAEIHRGGLLAVVKGQREAGKALGVGYRGVQRLIVVPQALRVALPTLANEYITIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL   +  ++++ VG  +  Q    +E +L   F Y+ +  + +  +  L   + +  +K
Sbjct: 167 SLVSVISLSEILLVGQQLYTQNFLVMETMLAVAFYYVFIVTVFSWLLRVLENHLDVTRRK 226



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 71/208 (34%), Gaps = 8/208 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            YT    +             L+    +   ++G  +   R S  + +     VY+  FR
Sbjct: 6   HYTLGLLWNGDFWRAVGTVVELSLETWLLGIVLGFFLALARQSELRWLRNSAGVYIWFFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-- 195
           ++P LV++ F+Y  +  V P     +  P+   L    LS      + +    +      
Sbjct: 66  SLPLLVLLIFVYN-LPQVFPSTSVVLSNPYSAGLIALVLSEAAYIAEIHRGGLLAVVKGQ 124

Query: 196 --LGIVLSLFATRLSRHFHEK--TGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPV 250
              G  L +    + R          ALP L      I  L +LV +I+L   L   + +
Sbjct: 125 REAGKALGVGYRGVQRLIVVPQALRVALPTLANEYITIVKLTSLVSVISLSEILLVGQQL 184

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             Q   +  + ++  F  ++I       
Sbjct: 185 YTQNFLVMETMLAVAFYYVFIVTVFSWL 212


>gi|152970013|ref|YP_001335122.1| putative ATP-binding component of a transport system [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|288935767|ref|YP_003439826.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|150954862|gb|ABR76892.1| putative ATP-binding component of a transport system [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|288890476|gb|ADC58794.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 506

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
              +      +  +          +  +   +  S VLG +L+L     ++         
Sbjct: 1   MTFNWNYMLSLLSDADFWWATWTVIKLSLLTWGCSIVLGFILAL-----AKQSPRGWLST 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              LYI  F    +P LVL+   Y +    P            ++  F +  +A+    A
Sbjct: 56  PARLYIWLF--RSMPLLVLLIFVYNMPQALPSF-------APVLNDPFWAGLLAMVLSEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI R GL+++PRGQ EAA ALGL +      V++PQA+R  +P L ++Y+ ++K S
Sbjct: 107 AYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQWRVIIPQALRVALPALANEYIAIVKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + ++
Sbjct: 167 SLVSVISLTEILMVGQQLYSQNFLVMETMTAVAFYYIFIVTVFDFLLKRLENYLDVTQR 225



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 12/196 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                     L+      + ++G ++   + S    ++   R+Y+ +FR++P LV++ F+
Sbjct: 17  FWWATWTVIKLSLLTWGCSIVLGFILALAKQSPRGWLSTPARLYIWLFRSMPLLVLLIFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVL 200
           Y  +   LP     +  PF   L    LS      + +    +         +  LG+  
Sbjct: 77  YN-MPQALPSFAPVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSIPRGQSEAARALGLRY 135

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGG 259
           +    R+      +   ALP L      I  L +LV +I+L   L   + +  Q   +  
Sbjct: 136 AGIQWRVIIPQALRV--ALPALANEYIAIVKLSSLVSVISLTEILMVGQQLYSQNFLVME 193

Query: 260 STVSPEFMSLYIALSC 275
           +  +  F  ++I    
Sbjct: 194 TMTAVAFYYIFIVTVF 209


>gi|149183272|ref|ZP_01861715.1| amino acid ABC transporter (permease) [Bacillus sp. SG-1]
 gi|148849032|gb|EDL63239.1| amino acid ABC transporter (permease) [Bacillus sp. SG-1]
          Length = 221

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +  +  + + SF  G++L++  T L+R    K  + +  +Y+S   I G P L
Sbjct: 10  LPMVKGALYYSIPLTLISFACGMILAI-TTALARLSGSKILRGIARVYVSA--IRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +         G  N    +     F S  IA S    A+ +EIVR+ + ++P+G
Sbjct: 67  VQLFIIFF--------GLGNLGIEALKFDPFPSAVIAFSLNVGAYASEIVRAAIQSIPKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  ++G+T+ +  + V+LPQA R  +PPL++ +++L+K++SLA  +   +L      
Sbjct: 119 QWEAGYSIGMTYGQNLKRVILPQAARVSVPPLSNSFISLVKDTSLASLILVTELFRKAQE 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I   T + + + +   F+Y  +  ++ L  +RL +++  
Sbjct: 179 IAATTYEFLLLYIEAAFLYWVMCFILTLIQDRLESRLDR 217



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 28/74 (37%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              +  L         I+       RLS +K++  I RVYV   R  P LV +F ++  +
Sbjct: 17  LYYSIPLTLISFACGMILAITTALARLSGSKILRGIARVYVSAIRGTPLLVQLFIIFFGL 76

Query: 153 LSVLPIPDHSIVLP 166
            ++          P
Sbjct: 77  GNLGIEALKFDPFP 90


>gi|296274225|ref|YP_003656856.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098399|gb|ADG94349.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 321

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 112/222 (50%), Gaps = 19/222 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L+   +T+  +    V +F +GI+++       +       K L  +Y++  ++ G P
Sbjct: 115 PILNGLWITLKISFFAAVLTFFIGIIVAFM-----KLSPIVFIKDLATVYVT--IVRGTP 167

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y +            +        F++  ++L  +  A++AEI+R  + ++ 
Sbjct: 168 LLVQIFLFYFI------------VANIFEFDRFVAGVLSLGIFFGAYMAEILRGAIQSID 215

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ+EA+ +LG+++ +A R ++LPQA +  +P L  + + L+K+SSL   +   DL  VG
Sbjct: 216 KGQLEASKSLGISNFQAMRYIILPQAFKRALPTLIGEMIALVKDSSLVSVISITDLTKVG 275

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             I+  T    E  +I   +YL ++ +++   +R+  K+ LK
Sbjct: 276 KEIVANTFSPFETWIIVALLYLCITSVLSFIGHRIEKKMTLK 317



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 31/68 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F   +    IG +V   +LS    +  +  VYV + R  P LV IF  
Sbjct: 116 ILNGLWITLKISFFAAVLTFFIGIIVAFMKLSPIVFIKDLATVYVTIVRGTPLLVQIFLF 175

Query: 149 YKSVLSVL 156
           Y  V ++ 
Sbjct: 176 YFIVANIF 183


>gi|206579195|ref|YP_002238837.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Klebsiella pneumoniae 342]
 gi|290509794|ref|ZP_06549165.1| amino acid ABC transporter ATP-binding protein [Klebsiella sp.
           1_1_55]
 gi|206568253|gb|ACI10029.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Klebsiella pneumoniae 342]
 gi|289779188|gb|EFD87185.1| amino acid ABC transporter ATP-binding protein [Klebsiella sp.
           1_1_55]
          Length = 506

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
              +      +  +          +  +   +  S VLG +L+L     ++         
Sbjct: 1   MTFNWNYMLSLLSDADFWWATWTVIKLSLLTWGCSIVLGFILAL-----AKQSPRGWLST 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              LYI  F    +P LVL+   Y +    P            ++  F +  +A+    A
Sbjct: 56  PARLYIWLF--RSMPLLVLLIFVYNMPQALPSF-------APVLNDPFWAGLLAMVLSEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI R GL+++PRGQ EAA ALGL +      V++PQA+R  +P L ++Y+ ++K S
Sbjct: 107 AYIAEIHRGGLLSIPRGQSEAARALGLRYAGIQWRVIIPQALRVALPALANEYIAIVKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + ++
Sbjct: 167 SLVSVISLTEILMVGQQLYSQNFLVMETMTAVAFYYIFIVTVFDFLLKRLENYLDVTQR 225



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 12/196 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                     L+      + ++G ++   + S    ++   R+Y+ +FR++P LV++ F+
Sbjct: 17  FWWATWTVIKLSLLTWGCSIVLGFILALAKQSPRGWLSTPARLYIWLFRSMPLLVLLIFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--------FSFVLGIVL 200
           Y  +   LP     +  PF   L    LS      + +    +         +  LG+  
Sbjct: 77  YN-MPQALPSFAPVLNDPFWAGLLAMVLSEAAYIAEIHRGGLLSIPRGQSEAARALGLRY 135

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGG 259
           +    R+      +   ALP L      I  L +LV +I+L   L   + +  Q   +  
Sbjct: 136 AGIQWRVIIPQALRV--ALPALANEYIAIVKLSSLVSVISLTEILMVGQQLYSQNFLVME 193

Query: 260 STVSPEFMSLYIALSC 275
           +  +  F  ++I    
Sbjct: 194 TMTAVAFYYIFIVTVF 209


>gi|210623568|ref|ZP_03293894.1| hypothetical protein CLOHIR_01844 [Clostridium hiranonis DSM 13275]
 gi|210153438|gb|EEA84444.1| hypothetical protein CLOHIR_01844 [Clostridium hiranonis DSM 13275]
          Length = 223

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 115/220 (52%), Gaps = 7/220 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     +  T  +I   +   G ++ L    L++       KAL  +YI   +I   P
Sbjct: 8   PYLPTFMKSTLTTIEISFIALFFGFIIGLILC-LAKMSKNGIFKALSTIYIE--VIRDTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +++ Y   +  P +   NF     +  +F++   ALS  + A++AEI+RSG+ +V 
Sbjct: 65  LLVQLSIIY---YGLPQI-GINFPSLFGIPSDFIAGAFALSINSGAYVAEIMRSGIQSVD 120

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEA+ +LGL++    R V++PQA+++I+P L +++++L+K S++   +G  D++   
Sbjct: 121 KGQMEASRSLGLSYWATMRHVIVPQAVKNILPSLANEFVSLVKESAILSFIGVIDIMFTA 180

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            T+ N T  +    L    IY  L+  ++  +  L  K+A
Sbjct: 181 NTVKNATYDSFGPYLFAAAIYFVLTFTLSKLVGLLEKKMA 220



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 35/83 (42%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y    +   + T  ++F  +    IIG ++   ++S N +   +  +Y+EV R+
Sbjct: 3   FDFVGPYLPTFMKSTLTTIEISFIALFFGFIIGLILCLAKMSKNGIFKALSTIYIEVIRD 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDH 161
            P LV +  +Y  +  +      
Sbjct: 63  TPLLVQLSIIYYGLPQIGINFPS 85


>gi|322833173|ref|YP_004213200.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168374|gb|ADW74073.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 222

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +    VF  +LG VL+L      R  H      L  
Sbjct: 2   QESIQLVLDSAPFLLKGTLFTLQLSLGGMVFGLILGFVLALM-----RLSHFWPLSWLSR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+S F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYVSVF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+   +  R V+LPQA R+ +PPL + ++ L+K++SLA
Sbjct: 104 SETLRAAISSIEKGQWEAAASIGMNPWQTMRRVILPQAARTALPPLGNSFIGLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      + ++T +   + L    IY  L+ +++   NRL  ++  ++++
Sbjct: 164 ATIQVPELFRQAQLVTSRTLEVFTMYLAASVIYWVLATVLSFLQNRLEDRVNRQDQE 220



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM+   I+G ++   RLS    ++W+ R YV VFR  P +  +F +
Sbjct: 15  LLKGTLFTLQLSLGGMVFGLILGFVLALMRLSHFWPLSWLSRFYVSVFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPAAMIGLSLN 98


>gi|293367120|ref|ZP_06613791.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291318681|gb|EFE59056.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Staphylococcus epidermidis
           M23864:W2(grey)]
          Length = 239

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFILGLIIALF-TALMRISTSKLLRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   N     T++P  ++  I LS    A+ +EI+R G++++P+GQ EAA ++G+ +R
Sbjct: 91  GRLVTNNADNQWTLAP-VIAAIIGLSLNVGAYASEIIRGGILSIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I L
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYL 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      ++I    +
Sbjct: 210 LVALMYWVVCFVISIIQGWYESRIERGYR 238



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   II       R+S +KL+  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFILGLIIALFTALMRISTSKLLRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  ++    + +      +   +L +   A   +   +L I
Sbjct: 91  GRLVTNNADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGILSI 133


>gi|163789522|ref|ZP_02183960.1| glutamine ABC transporter, permease/substrate-binding protein
           [Carnobacterium sp. AT7]
 gi|159875054|gb|EDP69120.1| glutamine ABC transporter, permease/substrate-binding protein
           [Carnobacterium sp. AT7]
          Length = 484

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 116/222 (52%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  L+    T+      F  + V+G++L LF+              +  LY++  ++ G
Sbjct: 278 YSELLTGLGRTLVLTLVSFAIALVVGVILGLFS-----ATSNNLLSGISTLYVT--IMRG 330

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V   L + ++F  P   QF  I  S     +++  I LS  T+A+I+E+VR G+ A
Sbjct: 331 IPLIV---LAFFVYFSIP---QFLNIQLS----AYLAGVITLSLNTSAYISELVRGGIQA 380

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ+EAA +LGL ++ + R ++LPQA++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 381 VAGGQLEAARSLGLPYKTSMRKIVLPQAIKIMIPSFINQFVITLKDTSILSVIGIVELTQ 440

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +T  +  + LI   +Y+ L  ++      L  K+A
Sbjct: 441 TGKIIIARTYSSGNMWLIIGIMYIVLITILTKLSTVLERKMA 482



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 39/77 (50%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T   +  + +L G   T  L       A ++G ++G    ++N L++ I  +YV + R 
Sbjct: 271 FTLIQNNYSELLTGLGRTLVLTLVSFAIALVVGVILGLFSATSNNLLSGISTLYVTIMRG 330

Query: 139 IPPLVVIFFLYKSVLSV 155
           IP +V+ FF+Y S+   
Sbjct: 331 IPLIVLAFFVYFSIPQF 347


>gi|307708017|ref|ZP_07644487.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
 gi|307615935|gb|EFN95138.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
          Length = 490

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L +   +  G P +V   + Y   +        N           ++    +S  T A++
Sbjct: 312 LNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAYM 361

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+ 
Sbjct: 362 TEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSVL 421

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 422 NVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 472


>gi|164687608|ref|ZP_02211636.1| hypothetical protein CLOBAR_01249 [Clostridium bartlettii DSM
           16795]
 gi|164603382|gb|EDQ96847.1| hypothetical protein CLOBAR_01249 [Clostridium bartlettii DSM
           16795]
          Length = 223

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 114/209 (54%), Gaps = 7/209 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S V+G VL L    L +  + K  K L   Y+   ++ G P  V + + Y   F
Sbjct: 21  ILVSLVSLVVGFVLGLLIC-LMKMSNFKVLKLLSSAYVQ--ILRGTPLFVQVFIIY---F 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L   +F     +S +F++   ALS  ++A+IAEI RSG+ +V +GQMEA+ +LGL 
Sbjct: 75  GLPQL-GIDFPDIGPISSKFIAGAFALSINSSAYIAEIFRSGIQSVDKGQMEASRSLGLG 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +    R V++PQA+++++P L ++++ L+K SS+   +G  +++   G ++    + +E 
Sbjct: 134 YADTMRFVIVPQAIKNVLPALANEFITLVKESSVLSVIGTQEIMFKAGIVVTAVYRPMEP 193

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +    IYL L+ +++  +  L  K+A  
Sbjct: 194 YIAAAVIYLVLTTILSKLVGILEKKLAKS 222



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 39/89 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  + Y   ++ G   T  ++   ++   ++G L+   ++S  K++  +   YV++ 
Sbjct: 1   MDFSVLNGYYGVLMEGTKYTILVSLVSLVVGFVLGLLICLMKMSNFKVLKLLSSAYVQIL 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           R  P  V +F +Y  +  +         +
Sbjct: 61  RGTPLFVQVFIIYFGLPQLGIDFPDIGPI 89


>gi|300868202|ref|ZP_07112834.1| Polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
 gi|300333826|emb|CBN58018.1| Polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
          Length = 478

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 13/249 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
             F    +       P  +             L F    +       + S  LG +  + 
Sbjct: 239 QWFSRPIAQEPTTDQPAATPKFGLDFGKILPNLPFILGGIWVTLTFTLLSAFLGFIWGIV 298

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L +    K        Y S F   G P ++ + L Y   F  P L  +N        
Sbjct: 299 L-SLFKISTIKPLSLFANGYTSIF--RGTPLILQLTLVY---FATPQLTGYNI------- 345

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
               +  I     + A+I+E +R+G+ AV +GQ EAA +LG+ ++     ++LPQA+++I
Sbjct: 346 SALQAGVITFFLNSGAYISETIRAGIQAVDKGQKEAAESLGVPYKLMMGDIILPQALKNI 405

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L ++ + LLK+S+L   +G  DL+     +  +     E ++    IY  + + +  
Sbjct: 406 LPALVNESIALLKDSALVSVIGVEDLLRRATIVGAEKYIYFEPLIFVGIIYYLMVLSLTW 465

Query: 384 FMNRLNAKI 392
             N L  ++
Sbjct: 466 GANVLERRL 474



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T            I G ++   ++S  K ++     Y  +FR  P ++ +  +
Sbjct: 274 ILGGIWVTLTFTLLSAFLGFIWGIVLSLFKISTIKPLSLFANGYTSIFRGTPLILQLTLV 333

Query: 149 YKSVLSV 155
           Y +   +
Sbjct: 334 YFATPQL 340


>gi|209547236|ref|YP_002279154.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538480|gb|ACI58414.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 318

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 117/245 (47%), Gaps = 11/245 (4%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    + +             +  +  + V + ++G VL L    ++R   +    +L  
Sbjct: 52  NENFGWPVVAQYFFDPVVVSGLYVSLGLTVVAMIIGTVLGLLL-AVARMSKDHLASSLAS 110

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVL--------GQFNFIGGSTVSPEFMSLYIAL 273
           L+I  F   G P LV +   Y L    P L          F     ++V     +    L
Sbjct: 111 LFIWFF--RGTPLLVQLIFWYNLSTLFPTLSIGIPFFGPTFASWDTNSVISPMTAAIAGL 168

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +   +A++AEI+R GL++V +GQ E A A G+T  +A R +++PQAMRSI+PP  +Q ++
Sbjct: 169 ALNESAYMAEIIRGGLLSVDKGQFETAEAFGMTRARALRRIIIPQAMRSIVPPTGNQLIS 228

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++K +SL   +  ADL+    +I N+T + I ++L+ +  YL ++ ++ +  + +     
Sbjct: 229 MIKATSLVSVIAMADLLYSVQSIYNRTFEVIPMLLVAVTWYLLITSVLNIGQSYIERYYG 288

Query: 394 LKEKK 398
             ++ 
Sbjct: 289 RGDRH 293



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   +  L    MI  T++G L+   R+S + L + +  +++  FR  P LV + F
Sbjct: 68  VVVSGLYVSLGLTVVAMIIGTVLGLLLAVARMSKDHLASSLASLFIWFFRGTPLLVQLIF 127

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
            Y     + P     I      F +    S  +      A + +
Sbjct: 128 WYNLST-LFPTLSIGIPFFGPTFASWDTNSVISPMTAAIAGLAL 170


>gi|134299235|ref|YP_001112731.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum reducens MI-1]
 gi|134051935|gb|ABO49906.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 223

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/221 (28%), Positives = 118/221 (53%), Gaps = 14/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    L      K+  F+   G ++ L    L++    K  +    LY  T++I G+P L
Sbjct: 15  LPNLLLGAVMTIKLTFFAITFGTLIGLLV-ALAKISSFKILRWFGGLY--TWVIRGVPLL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y             F+G +    EF    I +S    A+IAEI+R+G+ ++ +G
Sbjct: 72  LQLMFLYY---------GLPFMGLTLN--EFTVAVIGMSVCGGAYIAEIMRAGIQSIDKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA+++G+T+ +A R V+LPQA + ++PP+ ++++ L+K+S+L   +   +L+     
Sbjct: 121 QMEAALSMGMTYPQAMRRVILPQAYKRLLPPMGNEFITLMKDSALVSVICMTELLRAANL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + N T + IEI ++   +YL ++    + +NRL  K+A+ E
Sbjct: 181 LQNATFRPIEIYVVAGLLYLIMTTFFTMVVNRLEKKLAVSE 221



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 41/81 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G V T  L F  +   T+IG LV   ++S+ K++ W   +Y  V R +P L+ + FL
Sbjct: 18  LLLGAVMTIKLTFFAITFGTLIGLLVALAKISSFKILRWFGGLYTWVIRGVPLLLQLMFL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y  +  +    +   V   GM
Sbjct: 78  YYGLPFMGLTLNEFTVAVIGM 98


>gi|197117374|ref|YP_002137801.1| ABC transporter membrane protein [Geobacter bemidjiensis Bem]
 gi|197086734|gb|ACH38005.1| ABC transporter, membrane protein [Geobacter bemidjiensis Bem]
          Length = 339

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
             + + +     P + + +   +    + L    +T+     I V S + G++++L    
Sbjct: 107 LNFIASVKKEQKPRYVVFMEDCLRFLPQLLKGAVMTITLVVCIIVISPLGGLLIAL---- 162

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    K    L  L+I  F   G P L+ +   Y   +  P L       G T  P F
Sbjct: 163 -GRISTFKPVSGLCWLFIWLF--RGTPLLLQLFFIY---YGLPSL-------GITFKP-F 208

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L    +A++ EI+R G+ ++  GQMEAA A+G+++ +A R V++PQ  + ++PP
Sbjct: 209 TAAILGLGLNYSAYLGEIIRGGIQSIEHGQMEAAKAIGMSYWQAMRRVVIPQTYKRLMPP 268

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + ++++ L+K+++L   +   +L+     + N     +  +++  FIYL  + +      
Sbjct: 269 IGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFN-VTALILAAFIYLLFTTIFTFIFE 327

Query: 387 RLNAKIALKEKK 398
           ++  +  + E +
Sbjct: 328 KIEIRAGIYENR 339



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 44/90 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G V T  L    ++ + + G L+  GR+S  K V+ +C +++ +FR  P L+
Sbjct: 130 RFLPQLLKGAVMTITLVVCIIVISPLGGLLIALGRISTFKPVSGLCWLFIWLFRGTPLLL 189

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            +FF+Y  + S+            G+ LN 
Sbjct: 190 QLFFIYYGLPSLGITFKPFTAAILGLGLNY 219


>gi|330833503|ref|YP_004402328.1| amino acid ABC transporter amino acid-binding protein/permease
           [Streptococcus suis ST3]
 gi|329307726|gb|AEB82142.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis ST3]
          Length = 521

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLLYIST 226
             + L    +T+  +    +    +G+++ +F T       +    +K    +  +YI  
Sbjct: 289 WQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGWIINIYIEI 348

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V   + Y        L               ++    +S  T A+++EIVR
Sbjct: 349 F--RGTPMIVQSMVIYYGTAQAFGLNL----------DRTLAAIFIVSINTGAYMSEIVR 396

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +  
Sbjct: 397 GGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISV 456

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G T+  QT Q  +   +   IY  L+  +   +  +    
Sbjct: 457 VELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRAVEKHF 502



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
              +L G   T  ++  G I  T IG L+G  R +            K++ WI  +Y+E+
Sbjct: 289 WQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGWIINIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|297587192|ref|ZP_06945837.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Finegoldia magna ATCC 53516]
 gi|297575173|gb|EFH93892.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Finegoldia magna ATCC 53516]
          Length = 526

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 15/246 (6%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
            P    S V        +  L    +T+   +   +  F++GI++++           K 
Sbjct: 277 QPQGFLSKVKSIFNEYGSLFLKGALMTLFIASVSTIVGFLIGILVAVIRNMKLDKDKNKF 336

Query: 216 GKALP-----LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              L      +L     +  G P +V   L Y   F   +    +            +  
Sbjct: 337 TYYLHKVINFILACYVEIFRGTPMMVQSMLIY---FGAKLYLGID-------MAPISAAL 386

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             +S  T A+++E+VR G+ +V  GQMEA  ALG+TH ++   V+LPQA+++I+P + ++
Sbjct: 387 FIVSVNTGAYLSEVVRGGINSVDVGQMEACKALGMTHGQSMINVILPQAIKNILPSIGNE 446

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +   +L  V  +I   T    E   +   IY  L+  +   +  +  
Sbjct: 447 FVINIKDTSVLNVISVTELFFVSKSIAGSTYNIFETYAVTCVIYFVLTFSLTRLLLFIEK 506

Query: 391 KIALKE 396
           K   +E
Sbjct: 507 KSNNRE 512



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 12/79 (15%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA------------NKLVAWICRVY 132
           Y +  L G + T ++A    I   +IG LV   R               +K++ +I   Y
Sbjct: 292 YGSLFLKGALMTLFIASVSTIVGFLIGILVAVIRNMKLDKDKNKFTYYLHKVINFILACY 351

Query: 133 VEVFRNIPPLVVIFFLYKS 151
           VE+FR  P +V    +Y  
Sbjct: 352 VEIFRGTPMMVQSMLIYFG 370


>gi|254424601|ref|ZP_05038319.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196192090|gb|EDX87054.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 225

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 12/229 (5%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L F +      L    +T+   A    F  + GI L +     +R       + L   Y
Sbjct: 4   SLGFILDAVPALLKGALITLQLTAVSVAFGSIGGIALGI-----ARLSKAGPIRLLARAY 58

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F   G P LV + + Y   F  P L +    G      ++ +  + LS  +AA++AE
Sbjct: 59  IDFF--RGTPLLVQLFMIY---FGVPALVR--TFGLDFTFNQWGAAVLGLSLNSAAYLAE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR+G+ ++  GQ EAA +LGL   +  + V+ PQA+R ++PPL ++++ LLK++SL   
Sbjct: 112 IVRAGIQSIEVGQKEAAESLGLDSSQTMQYVVFPQALRRMVPPLGNEFITLLKDTSLVAV 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G+ +L   G  I+ +  ++ EI      IYL+L+++ +   + L  ++
Sbjct: 172 IGYQELFRQGQLIVARNFRSFEIFFAVALIYLALNVIASQAFSLLERRL 220



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 35/81 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G + T  L    +   +I G  +G  RLS    +  + R Y++ FR  P LV +F 
Sbjct: 14  ALLKGALITLQLTAVSVAFGSIGGIALGIARLSKAGPIRLLARAYIDFFRGTPLLVQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFG 168
           +Y  V +++            
Sbjct: 74  IYFGVPALVRTFGLDFTFNQW 94


>gi|283455706|ref|YP_003360270.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|283102340|gb|ADB09446.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
          Length = 443

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 13/221 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L    + +     I V SF + ++L + A  L R    +    +  +Y++ F   G P
Sbjct: 236 QSLPALMIGLKNTLFITVISFAIALLLGV-AFGLMRVGENRVASGVSKVYVAIF--RGTP 292

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV     +  +F  P L     IG S     +++  + LS  + A++AEIVR  + AV 
Sbjct: 293 ILVW---AFFFYFGVPQL-----IGHSVNI--WIAGALTLSLNSGAYLAEIVRGAIQAVD 342

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQME A +LGL  R++   V+LPQA +  +P + +Q + ++K+SSL +A+GF +L+   
Sbjct: 343 PGQMEGARSLGLNRRQSMARVILPQASKIAMPSVINQLVIMIKDSSLLLAIGFGELLYQA 402

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +     +  E +L+   IY     M+    N ++ K+  
Sbjct: 403 QQLYAANFRVTETLLLVGVIYFVAITMLTWLANIVDRKVNR 443



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 39/77 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+++G  NT ++       A ++G   G  R+  N++ + + +VYV +FR  P LV  FF
Sbjct: 240 ALMIGLKNTLFITVISFAIALLLGVAFGLMRVGENRVASGVSKVYVAIFRGTPILVWAFF 299

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  V  ++    +  +
Sbjct: 300 FYFGVPQLIGHSVNIWI 316


>gi|323698192|ref|ZP_08110104.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458124|gb|EGB13989.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 336

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 107/207 (51%), Gaps = 5/207 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ + S   GI++ LF   LSR       K   + YI   LI G P LV I + Y +  
Sbjct: 133 IEVSIISIFFGILIGLFTG-LSRISSNPFLKMSAITYIE--LIRGTPLLVQIMIWYFV-- 187

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +L       G    PE      +L+ +  A++AEIVR+G+ ++ +GQMEAA +LG+T
Sbjct: 188 LGTILNNLLIKAGLFQIPELWFGVASLAIFAGAYVAEIVRAGIQSIHKGQMEAARSLGMT 247

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              A R ++LPQA + I+PPL  Q+++L+K+SSL   +   +L       +  +    E+
Sbjct: 248 KVTAMRKIILPQAFKRILPPLAGQFISLIKDSSLLGVMAIRELTKATREAVTTSLMPYEL 307

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +YL ++  +++F+  L  + A
Sbjct: 308 WFVCGVLYLVITFTLSMFVQYLEKRTA 334



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  ++   +    +IG   G  R+S+N  +      Y+E+ R  P LV I   
Sbjct: 125 LLEGTLITIEVSIISIFFGILIGLFTGLSRISSNPFLKMSAITYIELIRGTPLLVQIMIW 184

Query: 149 YKSV 152
           Y  +
Sbjct: 185 YFVL 188


>gi|34556717|ref|NP_906532.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
 gi|34482431|emb|CAE09432.1| PERMEASE OF ABC TRANSPORTER [Wolinella succinogenes]
          Length = 321

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 110/226 (48%), Gaps = 19/226 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +     L    +T+  +    V +F +G +L+L      +    +  + +  +YI   +I
Sbjct: 111 YKAGPLLLGLWMTIKISLISGVIAFFIGAILALM-----KISKAQVFRDIATVYIE--VI 163

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV I + Y +            I        F +  I+L+ +  A+IAE++R  +
Sbjct: 164 RGTPLLVQIFIFYFI------------IATIFEIDSFYAGAISLAIFYGAYIAEVLRGAI 211

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EAA++LG+ + +   L+++PQA++  +P LT + + L+K+SSL   +   DL
Sbjct: 212 QSIDKGQQEAALSLGMNYFQTMTLIIIPQALKRSLPSLTGEMIALIKDSSLVSVISVTDL 271

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             VG  ++  T    E  ++   +Y +++  ++L  +RL   +  +
Sbjct: 272 TKVGREMVANTFSPFETWIVVAIMYFAITSSLSLLAHRLEDNMKKR 317



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   T  ++    + A  IG ++   ++S  ++   I  VY+EV R  P LV IF  
Sbjct: 116 LLLGLWMTIKISLISGVIAFFIGAILALMKISKAQVFRDIATVYIEVIRGTPLLVQIFIF 175

Query: 149 YKSV 152
           Y  +
Sbjct: 176 YFII 179


>gi|260429908|ref|ZP_05783883.1| ABC polar amino acid family transporter, inner membrane subunit
           [Citreicella sp. SE45]
 gi|260418831|gb|EEX12086.1| ABC polar amino acid family transporter, inner membrane subunit
           [Citreicella sp. SE45]
          Length = 296

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 123/270 (45%), Gaps = 15/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +    V+  L      +L  P     +     L+ + L    +T+     + V   V
Sbjct: 27  WRWLGIAAVVIGLAWIAFQILTNPGFEWDVVGKYMLHPQVLRGVGMTLWLTLLVMVMGTV 86

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GI++++      R  +++      + ++  F   G P LV +   Y L    P +    
Sbjct: 87  IGIIVAVM-----RLSNDRILNGTAVAFVWFF--RGTPVLVQLVFWYNLAAIFPDVSLGI 139

Query: 256 FIGGSTVS--------PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             GG  +           F +  + L     A++AEI+R+GL +V  GQ EA+ ALG   
Sbjct: 140 PFGGPKLFEISATVAISSFTAALLGLGFNEGAYMAEIIRAGLTSVDHGQTEASRALGHRP 199

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R+++LPQAM++IIPP  +Q + +LK +SLA  V   +L+    TI ++T Q + ++
Sbjct: 200 AQTFRVIVLPQAMKAIIPPTGNQVIGMLKYTSLASVVALGELMHSVETIYSRTFQTMPML 259

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++    YL L  ++++    +    +   K
Sbjct: 260 IVAALWYLILVSILSVVQYYIERHYSRGWK 289



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 30/61 (49%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    M+  T+IG +V   RLS ++++      +V  FR  P LV + F Y
Sbjct: 67  LRGVGMTLWLTLLVMVMGTVIGIIVAVMRLSNDRILNGTAVAFVWFFRGTPVLVQLVFWY 126

Query: 150 K 150
            
Sbjct: 127 N 127


>gi|28210297|ref|NP_781241.1| cystine/glutamine permease protein [Clostridium tetani E88]
 gi|28202733|gb|AAO35178.1| cystine/glutamine permease protein [Clostridium tetani E88]
          Length = 216

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 109/210 (51%), Gaps = 15/210 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ + S VLG ++ +F   L +    K    L   Y  T++I G P L+ +   Y  ++
Sbjct: 21  IELTIISVVLGSLIGVFV-ALLKLSKIKVLNGLASFY--TWIIRGTPMLLQL---YFFYY 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L                +  I LS  + A++AEI+R G+I+V +GQ EA  ALG +
Sbjct: 75  GLPFLN--------IELSAMTAAIIGLSLNSGAYMAEIIRGGIISVDKGQFEACKALGFS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIE 365
           + +  + ++LPQA+R ++PP  ++++ +LK++SL   + G  +++ V     + T + +E
Sbjct: 127 YGQTMKRIILPQAVRVLVPPTGNEFITILKDTSLVSVLGGMEEVMRVAQQSYSATFRPLE 186

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             L+   IYL L+ +  +   ++  K+++ 
Sbjct: 187 PFLVAACIYLILTTVFTIVFGKIEKKVSVY 216


>gi|309800525|ref|ZP_07694677.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
 gi|308115873|gb|EFO53397.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus infantis SK1302]
          Length = 313

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF + IV+ +     S     K+ + +  +++   +I G+P ++L A  +    
Sbjct: 114 LSLALISFAIAIVIGIIFGMFS-VSPYKSLRLISEIFVD--VIRGIPLMILAAFIFW--- 167

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P   + +  G  +   +F++  IALS  +AA+IAEIVR G+ AVP GQMEA+ +LG++
Sbjct: 168 GVPNFIE-SLTGQQSPINDFVAGTIALSLNSAAYIAEIVRGGIKAVPIGQMEASRSLGIS 226

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++
Sbjct: 227 YSKTMRKIVLPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKM 286

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             I    YL +  ++     RL  +I
Sbjct: 287 YAILAVFYLVIITLLTRLAKRLEKRI 312



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 106 LLSGLGITLSLALISFAIAIVIGIIFGMFSVSPYKSLRLISEIFVDVIRGIPLMILAAFI 165

Query: 149 Y 149
           +
Sbjct: 166 F 166


>gi|242240716|ref|YP_002988897.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132773|gb|ACS87075.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 502

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 10/235 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +   L     +          ++ V ++  GIVL L    L +       + L  +
Sbjct: 1   MNFDWPYLLELFAYADFWQASWLVVQLSVLTWCAGIVLGLLV-ALGKQSRLSGVRRLASV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F    LP LVL+   + L    P+           +S  F +  IAL     A+IA
Sbjct: 60  YIWLF--RSLPLLVLLIFIFNLPQIFPLTAGL-------LSDPFSAGLIALIVSETAYIA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL++V +GQ EA  ALGL   +    +++PQA+R  +P L ++++ ++K +SL  
Sbjct: 111 EIHRGGLLSVQKGQFEAGRALGLRAAQIRFYIVIPQALRISLPTLVNEFITIVKLTSLVS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  ++++ VG  +  +  + +E +L     Y+ +  +    +  L  ++ ++++
Sbjct: 171 VISLSEILMVGQRLYTENFKVLETLLAVACYYVLIVTLFERLIGWLEKRMDVQQR 225



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                     L+        ++G LV  G+ S    V  +  VY+ +FR++P LV++ F+
Sbjct: 17  FWQASWLVVQLSVLTWCAGIVLGLLVALGKQSRLSGVRRLASVYIWLFRSLPLLVLLIFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS----FVLGIVLSLFA 204
           +  +  + P+    +  PF   L    +S      + +    +      F  G  L L A
Sbjct: 77  FN-LPQIFPLTAGLLSDPFSAGLIALIVSETAYIAEIHRGGLLSVQKGQFEAGRALGLRA 135

Query: 205 TRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            ++   F+    +A    LP L      I  L +LV +    ++      L   NF    
Sbjct: 136 AQI--RFYIVIPQALRISLPTLVNEFITIVKLTSLVSVISLSEILMVGQRLYTENFKVLE 193

Query: 261 TVSPEFMSLYIALSCYT 277
           T+        + ++ + 
Sbjct: 194 TLLAVACYYVLIVTLFE 210


>gi|317054413|ref|YP_004118438.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952408|gb|ADU71882.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 307

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  L V+  +     S++  P     +    F     L    +T+   A   V  F  
Sbjct: 21  RWLSALAVLLCVVAMAHSMINNPRFEWGVIAENFTGPSILQGVLMTLQLTAISVVLGFAF 80

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKP 249
           G VL+L      R        A+   Y   F   G+P LV + L Y +           P
Sbjct: 81  GTVLALM-----RLSSNPVLVAVSWAYTWFF--RGVPMLVQLFLWYNIAALYPKIALSIP 133

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG+      +++   F +  IAL  + +A+ AEIVR+G+ +V  GQ+EAA ALG    +
Sbjct: 134 GLGEIWSAQSNSLVSPFSAAVIALVMHQSAYAAEIVRAGIQSVGNGQLEAARALGYRPAQ 193

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R  +LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T + I ++L+
Sbjct: 194 IFRHTVLPQAMRAIMPPAGNEIIGQLKTTAVVSVISLQDVLFSAQIIYQRTYEVIPLLLV 253

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++++    +         +
Sbjct: 254 ATLWYLLMTSVLSVGQYYVERYFGRGVTR 282



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 41/113 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L    ++     GT++   RLS+N ++  +   Y   FR +P LV +F  
Sbjct: 59  ILQGVLMTLQLTAISVVLGFAFGTVLALMRLSSNPVLVAVSWAYTWFFRGVPMLVQLFLW 118

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y        I      L       +  L  P         +   ++   IV +
Sbjct: 119 YNIAALYPKIALSIPGLGEIWSAQSNSLVSPFSAAVIALVMHQSAYAAEIVRA 171


>gi|281422145|ref|ZP_06253144.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Prevotella copri DSM 18205]
 gi|281403796|gb|EFB34476.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Prevotella copri DSM 18205]
          Length = 522

 Score =  162 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 14/227 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+       + S +LG ++++   R       K    L  LY    ++ G
Sbjct: 310 YQYLLQGLGNTLIITFFAIILSVILGTLIAIVRARHECKGDWKIPNMLCQLY--LTIMRG 367

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            PT+V + + Y + F             S    + +   IA    +AA+IAE++RSG+++
Sbjct: 368 TPTMVQLLIIYYVVF------------ASADVNKILVAVIAFGLNSAAYIAEVIRSGIMS 415

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEA  +LGL++ K  RL++LPQA ++++P + ++ + LLK +S++  +G  DL  
Sbjct: 416 VDNGQMEAGRSLGLSYGKTMRLIILPQAFKNVLPAMGNELITLLKETSISGYIGLVDLTK 475

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I + T +A+  + +   +YL L + +   + RL  ++   E+K
Sbjct: 476 GSDIIRSITYEAMMPLGVVACLYLVLVLGLYAGVRRLEKRLRKSERK 522



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRVYVEVF 136
           D +    +L G  NT  + F  +I + I+GTL+   R         K+   +C++Y+ + 
Sbjct: 306 DDNRYQYLLQGLGNTLIITFFAIILSVILGTLIAIVRARHECKGDWKIPNMLCQLYLTIM 365

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P +V +  +Y  V + 
Sbjct: 366 RGTPTMVQLLIIYYVVFAS 384


>gi|300715979|ref|YP_003740782.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           [Erwinia billingiae Eb661]
 gi|299061815|emb|CAX58931.1| Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           [Erwinia billingiae Eb661]
          Length = 290

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 116/258 (44%), Gaps = 9/258 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VVI  L  S++                F     L     T+  +          G+V ++
Sbjct: 38  VVIILLLGSLVHAFSQGKIEWSYVGQFFTARAILDGVVNTLVMSILAMALGIFFGVVAAI 97

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGS 260
                           L + Y   F   G P ++ + L + L    PV+       +   
Sbjct: 98  MYM-----SPNPVLHYLSVGYAWVF--RGTPLILQLLLWFNLALVFPVIAIPGVFSVETV 150

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            V   F++  + LS    A+ +E+VR+GL++V  GQ EAA ++G+   +A + ++LPQAM
Sbjct: 151 NVMTPFVAALLGLSINQGAYTSEVVRAGLLSVDTGQYEAAKSIGMPRLQALQRIILPQAM 210

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R I+PP+ +++++++K +SLA  + +++L+     I     + +E++ +    YL +  +
Sbjct: 211 RVILPPVGNEFISMIKTTSLASMIQYSELLYNTQNIYYANARVMELLFVAGIWYLIIVTV 270

Query: 381 IALFMNRLNAKIALKEKK 398
           ++   +RL    +  +++
Sbjct: 271 LSFGQSRLERYFSRGQRR 288



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A AIL G VNT  ++   M      G +     +S N ++ ++   Y  VFR  P ++ +
Sbjct: 67  ARAILDGVVNTLVMSILAMALGIFFGVVAAIMYMSPNPVLHYLSVGYAWVFRGTPLILQL 126

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 127 LLWFNLAL 134


>gi|225867875|ref|YP_002743823.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
 gi|225701151|emb|CAW98036.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus]
          Length = 522

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFL 228
             + L    +T+  +    +    +G+++ ++ T                  LL +   +
Sbjct: 289 WKQFLRGTGMTLLISMIGTITGLFIGLLIGIYRTAPKAKGKLAALAQRLFGGLLNVYIEV 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++  + +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIVIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRQIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRYIERRF 502



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
            S     L G   T  ++  G I    IG L+G  R +            +L   +  VY
Sbjct: 286 QSNWKQFLRGTGMTLLISMIGTITGLFIGLLIGIYRTAPKAKGKLAALAQRLFGGLLNVY 345

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +EVFR  P +V    +Y       
Sbjct: 346 IEVFRGTPMIVQSMVIYYGTAQAF 369


>gi|111657046|ref|ZP_01407843.1| hypothetical protein SpneT_02001722 [Streptococcus pneumoniae
           TIGR4]
          Length = 507

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 8/173 (4%)

Query: 228 LIFGLPTLVLIAL--KYQLHFDKPVLGQFNFIGGSTVS------PEFMSLYIALSCYTAA 279
           +I+GL  LV   L    ++    P++ Q   I   T           ++    +S  T A
Sbjct: 317 VIYGLQKLVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGA 376

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S
Sbjct: 377 YMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTS 436

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 437 VLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 489



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 273 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWVLNVY 332

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 333 IEIFRGTPMIVQSMVIYYGTAQAF 356


>gi|111017996|ref|YP_700968.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110817526|gb|ABG92810.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 330

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 70/270 (25%), Positives = 118/270 (43%), Gaps = 15/270 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +VV   L   V        +   +      + R  +    T+         + +L
Sbjct: 32  RWIAAIVVGLLLALFVNGARTNEAYRWDVYARYLFDARISAAAWNTIQLTILSMAIAIIL 91

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-------YQLHFDKP 249
           G+VL++      R       KA    Y+  F   G P  V +           QL    P
Sbjct: 92  GVVLAVM-----RLSPNPVLKAASWGYLWIF--RGTPVYVQLVFWGLFPSIYKQLDLGIP 144

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            + QF  I    ++  F+   I L    AA++AEIVR+G+ +V  GQ EA++ALG+T  +
Sbjct: 145 FVHQFVHIDLQGINAAFLFAVIGLGLNEAAYMAEIVRAGVNSVAEGQTEASVALGMTWSQ 204

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL 368
             R  +LPQAMR IIPP  ++ +++LK +SL  AV ++ +L      I     Q I +++
Sbjct: 205 TMRRTVLPQAMRVIIPPTGNELISMLKTTSLVTAVPYSLELYGRARDISGANFQPIPLLM 264

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    YL+++ ++ +    L    +    +
Sbjct: 265 VAATWYLAITSLLMIGQFYLERYYSKGASR 294



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 83  SSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
             YA  +          NT  L    M  A I+G ++   RLS N ++      Y+ +FR
Sbjct: 59  DVYARYLFDARISAAAWNTIQLTILSMAIAIILGVVLAVMRLSPNPVLKAASWGYLWIFR 118

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             P  V + F           P     L  G+   ++ +      ++      V    L
Sbjct: 119 GTPVYVQLVFWGL-------FPSIYKQLDLGIPFVHQFVHIDLQGINAAFLFAVIGLGL 170


>gi|242279192|ref|YP_002991321.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122086|gb|ACS79782.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 337

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 5/209 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+   + V  I+L LF   L+R       K   + YI   LI G P LV + + Y 
Sbjct: 131 FVTLKVSAIAIVFAIILGLFTG-LARISQNPALKLSAITYIE--LIRGTPLLVQMFIWYF 187

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     ++         +  P       +L+ +  A++AEIVR+G+ +V RGQMEAA +L
Sbjct: 188 V--LGTLVNNMLAKYDISQIPPLWFGIASLAIFAGAYVAEIVRAGIQSVHRGQMEAARSL 245

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A + ++LPQA R I+PPL  Q+++++K+SSL   +   +L       ++ + Q 
Sbjct: 246 GMSKYYAMKHIILPQAFRRILPPLAGQFISMIKDSSLLGVIAIRELTKGTREAVSTSLQP 305

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E+  +   +YL L+   ++F+  L  K+
Sbjct: 306 FELWFLCALLYLVLTFAFSMFVQYLEKKM 334



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G   T  ++   ++ A I+G   G  R+S N  +      Y+E+ R  P LV +F 
Sbjct: 125 VILDGLFVTLKVSAIAIVFAIILGLFTGLARISQNPALKLSAITYIELIRGTPLLVQMFI 184

Query: 148 LYKSVLSVLPIPDHSIVL 165
            Y  + +++        +
Sbjct: 185 WYFVLGTLVNNMLAKYDI 202


>gi|298502248|ref|YP_003724188.1| amino acid ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|298237843|gb|ADI68974.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 507

 Score =  162 bits (411), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 328 VLNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 377

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 378 MTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSV 437

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 438 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 489



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 273 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVY 332

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 333 IEIFRGTPMIVQSMVIYYGTAQAF 356


>gi|227500392|ref|ZP_03930454.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
 gi|227217455|gb|EEI82774.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Anaerococcus tetradius ATCC 35098]
          Length = 491

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 6/219 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L     T+       + SF+LG++++L  +       E +G     L     L   
Sbjct: 274 YKYLLDGLKTTVIVTVSSLIISFILGLIIALVRSAKIDMADELSG-----LPKFILLALD 328

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
               + + +         +L  FN I  + +    +   I+ +  ++A++AE+ R G+ +
Sbjct: 329 KILGLFVTIIRGTPTTIQLLIMFNVI-LANLDNLVLVAIISFALNSSAYMAELFRGGINS 387

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +G+ EAA +LGL++ +  + V++PQA+++ +P L ++ + L K +S++  +G ADL  
Sbjct: 388 VNKGEKEAARSLGLSNFQTMKKVVMPQAIKNSLPALGNEVITLFKETSISGFIGLADLTR 447

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
               +I+QT  A         IYL + +++     +L  
Sbjct: 448 GASIVISQTFDAATAYFSAAIIYLIIVMLMEKIFKQLEK 486


>gi|241889480|ref|ZP_04776779.1| arginine transport system permease protein ArtQ [Gemella
           haemolysans ATCC 10379]
 gi|241863787|gb|EER68170.1| arginine transport system permease protein ArtQ [Gemella
           haemolysans ATCC 10379]
          Length = 213

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 115/220 (52%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
               +       T  K+ + + ++G++L +    L++    K    +  +Y+   +I   
Sbjct: 6   PNYYTMYLEATVTTLKVSLIALLVGLILGIVVC-LAKISTFKVLNVIAAIYVE--IIRNT 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y           F           FMS  IALS  + A+++EI RSG++A+
Sbjct: 63  PILVQIMIIY-----------FALPEIGISFTPFMSAIIALSINSGAYVSEIFRSGILAI 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEA  +LGL++ +  +L++LPQA+++ +P L +++++L+K SS+   VG AD++  
Sbjct: 112 DKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPALGNEFISLVKESSIVYFVGVADIMFT 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             T+ N T Q     L+   IY  ++ +++L + RL  K+
Sbjct: 172 ANTVKNATYQTFGPYLVAAAIYFIITSILSLLVKRLEKKL 211



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    +Y T  L   V T  ++   ++   I+G +V   ++S  K++  I  +YVE+ RN
Sbjct: 2   FDFLPNYYTMYLEATVTTLKVSLIALLVGLILGIVVCLAKISTFKVLNVIAAIYVEIIRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P LV I  +Y ++  +       +     + +N+             A 
Sbjct: 62  TPILVQIMIIYFALPEIGISFTPFMSAIIALSINSGAYVSEIFRSGILAI 111


>gi|51893760|ref|YP_076451.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857449|dbj|BAD41607.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 268

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 12/215 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +A   +F  ++G+V  L  +R   +        L  LY+   ++ G P LV + L Y 
Sbjct: 65  QISALGILFGTLIGLVAGLLRSRKPSNLILWALYGLATLYVE--VVRGTPFLVQLYLMYY 122

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F         F+ G  + P   +  IALS  + A++AEI R  + ++ RGQMEA  +L
Sbjct: 123 GPF---------FLFGIDL-PAMTAGTIALSLNSGAYVAEIFRGAIESIDRGQMEAGRSL 172

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R ++LPQA R  +PPL +++ +L+K SS+   +G AD++    T+       
Sbjct: 173 GLTFAQTMRHIILPQAFRRALPPLANEFASLIKESSVISVLGVADIMFKTKTVGTAHFAM 232

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + +L+    YL L+ + +  +  L  ++   + +
Sbjct: 233 FQALLVAAVYYLVLTGITSQLVRLLERRLGKSDSR 267



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRVYVEVFRN 138
           ++   I  G   T  ++  G++  T+IG + G  R           +  +  +YVEV R 
Sbjct: 51  TFVPIIFEGVKITLQISALGILFGTLIGLVAGLLRSRKPSNLILWALYGLATLYVEVVRG 110

Query: 139 IPPLVVIFFLYKS 151
            P LV ++ +Y  
Sbjct: 111 TPFLVQLYLMYYG 123


>gi|302391067|ref|YP_003826887.1| amino acid ABC transporter membrane protein [Acetohalobium
           arabaticum DSM 5501]
 gi|302203144|gb|ADL11822.1| amino acid ABC transporter membrane protein, PAAT family
           [Acetohalobium arabaticum DSM 5501]
          Length = 217

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 62/222 (27%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F         KI   +  +GI+L      L+R         +   YI  F   G P L
Sbjct: 9   LPFLLKGSVMTIKITTIAVGMGIILGNVLG-LARVSKNPIIGGVAKGYIEIF--RGTPLL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + +   L++  P L       G  ++P +++  + L   + A++ EIVR G+ ++ +G
Sbjct: 66  VQLFI---LYYGLPSL-------GINLTP-YIAAVLGLGLNSGAYVGEIVRGGIESIDKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G+++ ++ R ++LPQA +SI+P L ++++ LLK+SSL   +   DL   G  
Sbjct: 115 QMEAARSVGMSYAQSMRYIILPQAFKSIVPALGNEFIALLKDSSLVSVIAVKDLTRQGRL 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II++T Q+  I L     Y  +  ++   +N    K+   ++
Sbjct: 175 IISRTYQSFFIFLTVAVFYFIMVFIMTRLVNYAERKLKTSDQ 216



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 42/84 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    +    I+G ++G  R+S N ++  + + Y+E+FR  P LV +F L
Sbjct: 12  LLKGSVMTIKITTIAVGMGIILGNVLGLARVSKNPIIGGVAKGYIEIFRGTPLLVQLFIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  + S+       I    G+ LN
Sbjct: 72  YYGLPSLGINLTPYIAAVLGLGLN 95


>gi|239944222|ref|ZP_04696159.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces roseosporus NRRL 15998]
 gi|239990678|ref|ZP_04711342.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces roseosporus NRRL 11379]
 gi|291447694|ref|ZP_06587084.1| permease [Streptomyces roseosporus NRRL 15998]
 gi|291350641|gb|EFE77545.1| permease [Streptomyces roseosporus NRRL 15998]
          Length = 322

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 4/192 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF--IGGSTVSPEF 266
           R         +  LYI  F   G P  V + L + L    PVL          + V   F
Sbjct: 106 RLSKNPVTSWVAWLYIWFF--RGTPVYVQLLLWFNLALIFPVLNIPFIYKDEMTDVMTPF 163

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M   + L+   AA++AEI R+G+ +V  GQ EA+ ALG+T  K  R V+LPQA+R IIPP
Sbjct: 164 MCALLGLALNEAAYMAEICRAGIQSVDEGQTEASHALGMTQAKTMRRVVLPQALRVIIPP 223

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             ++++N+LK SSL  AV + +L+     I + +   +E++ +    Y+ ++ + ++   
Sbjct: 224 TGNEFINMLKTSSLVYAVTYNELLRSTSQIGSTSYAVMEMLFVASIWYIVMTSVFSVGQY 283

Query: 387 RLNAKIALKEKK 398
            L  + A    +
Sbjct: 284 YLERRFARGSLR 295



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 2/111 (1%)

Query: 69  GFEIDQGIVPYTS--DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           G+   QG + + +  D  + + ++ G   T  ++   M+   ++G ++   RLS N + +
Sbjct: 55  GYAFSQGNIQWQAVGDKLFDSNVVAGAGRTLLISVLAMVLGVVLGVVLAVMRLSKNPVTS 114

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           W+  +Y+  FR  P  V +   +   L    +    I       +    + 
Sbjct: 115 WVAWLYIWFFRGTPVYVQLLLWFNLALIFPVLNIPFIYKDEMTDVMTPFMC 165


>gi|78186898|ref|YP_374941.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78166800|gb|ABB23898.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Chlorobium luteolum DSM 273]
          Length = 990

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 15/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     I V S + G VL      + R    KT K L  ++IS  L+ G P
Sbjct: 776 NRWKLILSGLRVTVIISVLSALFGTVLGAGVCAM-RMSSAKTLKTLASVFIS--LLRGTP 832

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVL+ L + + F             S          IA     AA++AEI RSG+ ++ 
Sbjct: 833 VLVLLMLIFYVVF------------ASVSIDPVAVAVIAFGLNFAAYVAEIFRSGVESID 880

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EA I++G T  +   L++LPQ ++ I+P    ++L+L+K +S+   +   DL   G
Sbjct: 881 NGQREAGISMGFTRLRTFLLIILPQTIQRILPVYKGEFLSLVKMTSIVGYIAVEDLTKAG 940

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I ++T  A   +++   +Y S+S ++   M  L  +   K K+
Sbjct: 941 DIIRSRTFDAFFPLIMVAILYFSISWLLLQSMAYLERRTDPKFKR 985



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL G   T  ++    +  T++G  V A R+S+ K +  +  V++ + R  P LV++
Sbjct: 778 WKLILSGLRVTVIISVLSALFGTVLGAGVCAMRMSSAKTLKTLASVFISLLRGTPVLVLL 837

Query: 146 FFLYKSVL-SVLPIPDHSIVLPFGM 169
             ++  V  SV   P    V+ FG+
Sbjct: 838 MLIFYVVFASVSIDPVAVAVIAFGL 862


>gi|153012083|ref|YP_001373294.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563971|gb|ABS17465.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 307

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 14/267 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I   ++I F+   V  +   P+    +      ++R L    LT+           VLG 
Sbjct: 30  IAATLLIIFILYCVKMIAANPNFGWNVVGEYLFDSRILWGLYLTLWLTVVTMAIGVVLGT 89

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKPVL 251
           +L++ A       +      +   YI  F   G P LV +   Y L           P  
Sbjct: 90  ILAIMAM-----SNNIVISNVANAYIWFF--RGTPVLVQLIFWYNLGALFPEMSIGLPFT 142

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             +  +  +++     +  + L     A+++EI+RSGL++V  GQ +AA +LG+T+ KA 
Sbjct: 143 SWWISVPTNSLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVEPGQKQAAKSLGMTNGKAL 202

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQAM  IIPP  +Q + +LK SSL   +  ADL+    TI ++  Q I ++++  
Sbjct: 203 WRIILPQAMPVIIPPTGNQTIGMLKTSSLVSVISLADLLYSAQTIYSRNFQTIPLLIVAC 262

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
             YL+ + +++    R+        ++
Sbjct: 263 IWYLAATTILSAAQVRIERHFGRSNQQ 289



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 37/101 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T WL    M    ++GT++    +S N +++ +   Y+  FR  P LV + F 
Sbjct: 66  ILWGLYLTLWLTVVTMAIGVVLGTILAIMAMSNNIVISNVANAYIWFFRGTPVLVQLIFW 125

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y        +        + + +    L  P         +
Sbjct: 126 YNLGALFPEMSIGLPFTSWWISVPTNSLISPVTAAVLGLGL 166


>gi|306831123|ref|ZP_07464284.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304426689|gb|EFM29800.1| amino acid ABC superfamily ATP binding cassette transporter
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 522

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 12/215 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               + V S +L +VL  F T  +R         L  LYI   ++ GLP LV+++L +  
Sbjct: 24  MTVFLSVVSMILALVLGGFVTA-ARMSDNLLISGLTKLYIE--VVRGLPMLVILSLFFYG 80

Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L F+ P    F            +S  I L+   + F+AEI RSG+ AV  GQ E A
Sbjct: 81  LPELGFNVPDGSLFG-----VDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGA 135

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G    +  R V++PQA ++I+P L +++ N +K+SS A  +G ADL+    TI   +
Sbjct: 136 RSIGFNKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTIQGIS 195

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +  + ++    +YL  +      +     K++  
Sbjct: 196 YKPFQAVIAVGIVYLLFTFSTTRIVAHYEKKMSRS 230



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 45/88 (51%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y + IL G + T +L+   MI A ++G  V A R+S N L++ + ++Y+EV R +P L
Sbjct: 12  QNYGSFILDGALMTVFLSVVSMILALVLGGFVTAARMSDNLLISGLTKLYIEVVRGLPML 71

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           V++   +  +  +        +    + 
Sbjct: 72  VILSLFFYGLPELGFNVPDGSLFGVDLD 99


>gi|302558467|ref|ZP_07310809.1| arginine/ornithine transporter [Streptomyces griseoflavus Tu4000]
 gi|302476085|gb|EFL39178.1| arginine/ornithine transporter [Streptomyces griseoflavus Tu4000]
          Length = 326

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 5/261 (1%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P   V   +  ++L  +        + +G   +          +     + V S V+GI 
Sbjct: 44  PGRYVSAVVALALLGAVVYAFAQGKINWGAIPDYFFDDRILHGVGNTLLLTVLSMVIGIA 103

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFI 257
             +    + R        +L   YI  F   G P LV + + + L   F+   LG     
Sbjct: 104 GGILL-AVMRLSKNPVTSSLAWFYIWFF--RGTPVLVQLFVWFNLGLVFEYINLGPVYKD 160

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             ++     ++  + L    AA+++EI R+GL++V  GQ EA+ ALG++H K  R +++P
Sbjct: 161 YWASFMTPLLTALLGLGLNEAAYMSEICRAGLLSVDEGQTEASHALGMSHTKTLRRIVVP 220

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QAMR I+PP  ++ +N+LK +SL  AV FADL      I   +G  +E+  +    YL +
Sbjct: 221 QAMRVIVPPTGNEVINMLKTTSLVSAVQFADLFQEAKDIGQNSGSPVEMYFLAAAWYLIM 280

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           + ++++    +    A    +
Sbjct: 281 TSILSVGQYYIERHYARGSVR 301



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 68  AGFEIDQGIVP-YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           A  +I+ G +P Y  D      IL G  NT  L    M+     G L+   RLS N + +
Sbjct: 65  AQGKINWGAIPDYFFDDR----ILHGVGNTLLLTVLSMVIGIAGGILLAVMRLSKNPVTS 120

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVL 153
            +   Y+  FR  P LV +F  +   L
Sbjct: 121 SLAWFYIWFFRGTPVLVQLFVWFNLGL 147


>gi|289168650|ref|YP_003446919.1| ABC transporter permease and substrate-binding protein, amino acid
           transport [Streptococcus mitis B6]
 gi|288908217|emb|CBJ23059.1| ABC transporter permease and substrate-binding protein, amino acid
           transport [Streptococcus mitis B6]
          Length = 521

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 ILNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG++H +  R ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMSHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV+WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVSWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|78186724|ref|YP_374767.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78166626|gb|ABB23724.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Chlorobium luteolum DSM 273]
          Length = 990

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 15/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     I V S + G VL      + R    KT K L  ++IS  L+ G P
Sbjct: 776 NRWKLILSGLRVTVIISVLSALFGTVLGAGVCAM-RMSSAKTLKTLASVFIS--LLRGTP 832

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVL+ L + + F             S          IA     AA++AEI RSG+ ++ 
Sbjct: 833 VLVLLMLIFYVVF------------ASVSIDPVAVAVIAFGLNFAAYVAEIFRSGVESID 880

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EA I++G T  +   L++LPQ ++ I+P    ++L+L+K +S+   +   DL   G
Sbjct: 881 NGQREAGISMGFTRLRTFLLIILPQTIQRILPVYKGEFLSLVKMTSIVGYIAVEDLTKAG 940

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I ++T  A   +++   +Y S+S ++   M  L  +   K K+
Sbjct: 941 DIIRSRTFDAFFPLIMVAILYFSISWLLLQSMAYLERRTDPKFKR 985



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL G   T  ++    +  T++G  V A R+S+ K +  +  V++ + R  P LV++
Sbjct: 778 WKLILSGLRVTVIISVLSALFGTVLGAGVCAMRMSSAKTLKTLASVFISLLRGTPVLVLL 837

Query: 146 FFLYKSVL-SVLPIPDHSIVLPFGM 169
             ++  V  SV   P    V+ FG+
Sbjct: 838 MLIFYVVFASVSIDPVAVAVIAFGL 862


>gi|226360126|ref|YP_002777904.1| amino acid ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226238611|dbj|BAH48959.1| putative amino acid ABC transporter permease protein [Rhodococcus
           opacus B4]
          Length = 327

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 15/270 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +VV   L   V        +   +      + R  +    T+         + VL
Sbjct: 29  RWIAAIVVGLLLALFVNGARTNEAYRWDVYAQYLFDARISAAAWNTIQLTILSMAIAIVL 88

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-------YQLHFDKP 249
           G+VL++      R       KA    Y+  F   G P  V +           QL    P
Sbjct: 89  GVVLAVM-----RLSPNPVLKAASWGYLWIF--RGTPVYVQLVFWGLFPSIYKQLDLGIP 141

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            + QF  I    ++  F+   I L    AA++AEIVR+G+ +V  GQ EA++ALG+T  +
Sbjct: 142 FVHQFVHIDLQGINAAFLFAVIGLGLNEAAYMAEIVRAGVNSVAEGQSEASVALGMTWSQ 201

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL 368
             R  +LPQAMR IIPP  ++ +++LK +SL  AV ++ +L      I     Q I +++
Sbjct: 202 TMRRTVLPQAMRVIIPPTGNELISMLKTTSLVTAVPYSLELYGRARDISGANFQPIPLLM 261

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    YL+++ ++ +    L    +    +
Sbjct: 262 VAATWYLAITSLLMIGQFYLERYYSKGASR 291



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
            NT  L    M  A ++G ++   RLS N ++      Y+ +FR  P  V + F      
Sbjct: 72  WNTIQLTILSMAIAIVLGVVLAVMRLSPNPVLKAASWGYLWIFRGTPVYVQLVFWGL--- 128

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                P     L  G+   ++ +      ++      V    L
Sbjct: 129 ----FPSIYKQLDLGIPFVHQFVHIDLQGINAAFLFAVIGLGL 167


>gi|222099044|ref|YP_002533612.1| Amino acid ABC transporter, permease protein [Thermotoga
           neapolitana DSM 4359]
 gi|221571434|gb|ACM22246.1| Amino acid ABC transporter, permease protein [Thermotoga
           neapolitana DSM 4359]
          Length = 216

 Score =  162 bits (410), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 114/230 (49%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +P  + +    L           ++   + ++G+ + +F   + R    +  +    +Y+
Sbjct: 1   MPEWLKVIVDNLPLLLKGALRTLQLTSLAVLIGLAIGIFVG-MGRLSKYRIIRYPSSVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I G P +V + L Y   F  P L              F +  +AL   + A++AEI
Sbjct: 60  EF--IRGTPLMVQLFLVY---FGLPEL--------GLEFDRFTAAVVALGINSGAYVAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ +VP+GQ EAA +LG++H +A   V+LPQA R I+P L ++++ L K+SSLA+ +
Sbjct: 107 VRAGIQSVPKGQYEAARSLGMSHFQAMVHVILPQAFRHILPALGNEFIALAKDSSLAMVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L+     I+++T  +  I      IY +++  ++  +  +  ++ +
Sbjct: 167 GTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVRFVEGRLKI 216



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++    IG  VG GRLS  +++ +   VYVE  R  P +V +F +
Sbjct: 15  LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFIRGTPLMVQLFLV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +    D        + +N
Sbjct: 75  YFGLPELGLEFDRFTAAVVALGIN 98


>gi|146321731|ref|YP_001201442.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis 98HAH33]
 gi|253752541|ref|YP_003025682.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis SC84]
 gi|253754367|ref|YP_003027508.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|253756301|ref|YP_003029441.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|145692537|gb|ABP93042.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis 98HAH33]
 gi|251816830|emb|CAZ52475.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis SC84]
 gi|251818765|emb|CAZ56603.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis BM407]
 gi|251820613|emb|CAR47371.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis P1/7]
 gi|292559150|gb|ADE32151.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis GZ1]
 gi|319758952|gb|ADV70894.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus suis JS14]
          Length = 521

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 17/224 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLLYIST 226
             + L    +T+  +    +    +G+++ +F T       +    +K    +  +YI  
Sbjct: 289 WQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGWIINIYIEI 348

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V   + Y        L               ++    +S  T A+++EIVR
Sbjct: 349 F--RGTPMIVQSMVIYYGTAQAFGLNL----------DRTLAAIFIVSINTGAYMSEIVR 396

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +  
Sbjct: 397 GGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISV 456

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +L   G T+  QT Q  +   +   IY  L+  +   +  +  
Sbjct: 457 VELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRAVEK 500



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
              +L G   T  ++  G I  T IG L+G  R +            K++ WI  +Y+E+
Sbjct: 289 WQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGWIINIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|223983007|ref|ZP_03633216.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM
           12042]
 gi|223965053|gb|EEF69356.1| hypothetical protein HOLDEFILI_00495 [Holdemania filiformis DSM
           12042]
          Length = 519

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 114/226 (50%), Gaps = 18/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   +S    T+   A    F  + G ++++      +       K +  +Y+   ++ G
Sbjct: 311 SGIFMSGLWETLKLAAITVFFGTIFGALIAII-----KLSKNPLLKFITAVYVE--VLRG 363

Query: 232 LPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            P LV + +  + L    P L             ++  + IAL   ++A++AEI+RSG+ 
Sbjct: 364 TPILVQLYIFRFFLPMAFPWLNL----------SKYACVVIALVFNSSAYVAEIIRSGIQ 413

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EAA +LG+++R     ++LPQA+++I+P L ++++ ++K +SLA      +L+
Sbjct: 414 AVDKGQSEAAKSLGMSNRHMMMKIILPQAVKNILPALGNEFVTMIKETSLASTFYIGELM 473

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +++    A + ++I   IY  ++ +++  +  +  ++++ +
Sbjct: 474 YTRTLLMSTKFYAWQPLIIIAAIYFVVTFVLSKGIQYMEKRMSVSD 519



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  LA   +   TI G L+   +LS N L+ +I  VYVEV R  P LV ++  
Sbjct: 314 FMSGLWETLKLAAITVFFGTIFGALIAIIKLSKNPLLKFITAVYVEVLRGTPILVQLYIF 373

Query: 149 YKSVLSVLPI 158
              +    P 
Sbjct: 374 RFFLPMAFPW 383


>gi|195978808|ref|YP_002124052.1| amino acid ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225871211|ref|YP_002747158.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
 gi|195975513|gb|ACG63039.1| amino acid ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225700615|emb|CAW95155.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus equi subsp. equi 4047]
          Length = 522

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFL 228
             + L    +T+  +    +    +G+++ ++ T                  LL +   +
Sbjct: 289 WKQFLRGTGMTLLISMIGTITGLFIGLLIGIYRTAPKAKGKLAALAQRLFGGLLNVYIEV 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++  + +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIVIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRQIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRYIERRF 502



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
            S     L G   T  ++  G I    IG L+G  R +            +L   +  VY
Sbjct: 286 QSNWKQFLRGTGMTLLISMIGTITGLFIGLLIGIYRTAPKAKGKLAALAQRLFGGLLNVY 345

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +EVFR  P +V    +Y       
Sbjct: 346 IEVFRGTPMIVQSMVIYYGTAQAF 369


>gi|118473378|ref|YP_884593.1| polar amino acid ABC transporter inner membrane protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118174665|gb|ABK75561.1| ABC polar amino acid family protein transporter, inner membrane
           subunit [Mycobacterium smegmatis str. MC2 155]
          Length = 323

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 10/262 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   V++  +  ++ SV         L  G   + + L    LT+           VL
Sbjct: 42  RWLSGGVMVVLVALALRSVATNDRFGWPLVAGYLFDPQILEGVRLTLVLTFVCMAIGIVL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---GQ 253
           G VL++      R       +AL   Y+  F   G P LV +   +      P L     
Sbjct: 102 GTVLAVM-----RLSANPVAQALAFAYVGFF--RGTPVLVQLIFWFNFAALYPHLSFGIP 154

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
              I  + +    ++  + L  + AA++AEI+R G+ ++  GQ+EAA ALGL   +  R 
Sbjct: 155 GVDIDANALISPVLAGVLGLGLHEAAYMAEIIRGGIGSIDVGQIEAARALGLRKNQVLRR 214

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQAMR I+PP  ++ + +LK SSL   +   +L+     I     Q I ++++    
Sbjct: 215 IVLPQAMRVIVPPTGNEVVGMLKTSSLVSVLAVGELLYSAQLIYASNYQTIPLLIVASLW 274

Query: 374 YLSLSIMIALFMNRLNAKIALK 395
           YL L+ +++    RL    A  
Sbjct: 275 YLVLTAVLSAGQMRLERHFARG 296



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 30/69 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L F  M    ++GT++   RLSAN +   +   YV  FR  P LV + F 
Sbjct: 80  ILEGVRLTLVLTFVCMAIGIVLGTVLAVMRLSANPVAQALAFAYVGFFRGTPVLVQLIFW 139

Query: 149 YKSVLSVLP 157
           +        
Sbjct: 140 FNFAALYPH 148


>gi|169349946|ref|ZP_02866884.1| hypothetical protein CLOSPI_00686 [Clostridium spiroforme DSM 1552]
 gi|169293159|gb|EDS75292.1| hypothetical protein CLOSPI_00686 [Clostridium spiroforme DSM 1552]
          Length = 227

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 114/230 (49%), Gaps = 7/230 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L F      T+  I   S ++G V  +     ++  + K  +A+  +Y+  
Sbjct: 5   FDSIFTPENLLFLLKGAMTSLGIAALSLLIGFVFGVLGAS-AKISNNKILRAIANVYVE- 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P L+ I + + +    P++      G       ++   +A+S  + A+  E++R
Sbjct: 63  -VIRGTPMLLQIMIIFNV---VPIIIT-EITGNVFRMNYYLIGVVAMSINSGAYTTELIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+  V +GQ EA   LGL+  +  R V+LPQA + I+PPL S+++ L+K+SSL   +G 
Sbjct: 118 SGINGVDKGQWEACQTLGLSRWQTMRFVILPQAFKRIVPPLVSEFITLIKDSSLISVIGA 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +L++    I NQ  + +    +    YL++++ I+    ++  K+A+ +
Sbjct: 178 VELMNSAKVIGNQYYEFMSPYCLAGLYYLAMTLTISYIAKKIERKLAVSD 227



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + +  +A   ++   + G L  + ++S NK++  I  VYVEV R  P L+ I  +
Sbjct: 17  LLKGAMTSLGIAALSLLIGFVFGVLGASAKISNNKILRAIANVYVEVIRGTPMLLQIMII 76

Query: 149 YKSVL 153
           +  V 
Sbjct: 77  FNVVP 81


>gi|90961050|ref|YP_534966.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
 gi|90820244|gb|ABD98883.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
          Length = 485

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 17/221 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   L+    T+       + + + GIV+             K  + +    I  F   G
Sbjct: 280 SGVFLNGLWKTIYLTILGIIGATIFGIVIGFLG-----VIPNKFAQGISTTVIYIF--RG 332

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         T  P F++  I L+    A+ A  V+ G+ A
Sbjct: 333 LPLLVLALFIYN---GIPSLTG-------TKIPAFIAGIITLTLNEGAYTAAFVKGGIEA 382

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL+  KA + ++LPQ ++ ++P   +Q++  LK++S+   +G  +L  
Sbjct: 383 VDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLKDTSILSIIGILELTQ 442

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  +  ++  I   +YL +  ++    N L  K+
Sbjct: 443 TGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 34/68 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T +L   G+I ATI G ++G   +  NK    I    + +FR +P LV+  F
Sbjct: 282 VFLNGLWKTIYLTILGIIGATIFGIVIGFLGVIPNKFAQGISTTVIYIFRGLPLLVLALF 341

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 342 IYNGIPSL 349


>gi|312127065|ref|YP_003991939.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777084|gb|ADQ06570.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 220

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++  A       V G+V +LF     R    K    +   Y+  F   G P L
Sbjct: 14  LKASVVTIELTAIAVTIGLVFGLVAALF-----RISKIKVLNYIGSFYVWLF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I   Y              I  +   P F++  IAL   + A+ AEI+R+ ++++ +G
Sbjct: 67  LQIFFIYY---------GLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+     
Sbjct: 118 QYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             + TG+  EI +  + IYL+L+ + +   N L  ++   E++
Sbjct: 178 KASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L   V T  L    +    + G +    R+S  K++ +I   YV +FR  P L+ 
Sbjct: 9   YFPVLLKASVVTIELTAIAVTIGLVFGLVAALFRISKIKVLNYIGSFYVWLFRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLP 157
           IFF+Y  +  ++P
Sbjct: 69  IFFIYYGLPKIVP 81


>gi|39998494|ref|NP_954445.1| amino acid ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39985441|gb|AAR36795.1| amino acid ABC transporter, permease protein [Geobacter
           sulfurreducens PCA]
 gi|298507439|gb|ADI86162.1| amino acid ABC transporter, membrane protein [Geobacter
           sulfurreducens KN400]
          Length = 263

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 114/224 (50%), Gaps = 15/224 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L F    +    ++ V + +L +V+ L A  L R    +    +  LY+   +I
Sbjct: 52  DPYLNILKFVPDGILVTFQVTVGAILLALVIGLVAG-LGRISSNRIINGIASLYVE--II 108

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV +   Y              +G     P+  S  IA++    A++ E++R+G+
Sbjct: 109 RGIPLLVQLFYIYY------------ALGRFVHVPDMASAIIAMAVCYGAYMGEVIRAGI 156

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+GQMEAA +LG+T  +A R V+LPQA + ++PP+ ++++ LLK+SSL   +  AD+
Sbjct: 157 QSIPKGQMEAARSLGMTKGQAMRHVILPQAAKVVLPPIGNEFIALLKDSSLVSILAVADI 216

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  G    +++    E   +   +YL +++ ++  +  +  +I+
Sbjct: 217 LRRGREFASESFTYFETYTVIALVYLIITLFLSKLIGIMEERIS 260



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 44/69 (63%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++ A +IG + G GR+S+N+++  I  +YVE+ R IP LV +F++Y +
Sbjct: 64  GILVTFQVTVGAILLALVIGLVAGLGRISSNRIINGIASLYVEIIRGIPLLVQLFYIYYA 123

Query: 152 VLSVLPIPD 160
           +   + +PD
Sbjct: 124 LGRFVHVPD 132


>gi|326803801|ref|YP_004321619.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651293|gb|AEA01476.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 548

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 18/240 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHE 213
               V         + L     TM       +  F++G++++++ +              
Sbjct: 301 FWGEVASIWSTYKGQLLKGAATTMYIALISTLVGFLIGLLIAIYRSMPIAESSGIVSILY 360

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  + L   YI  F   G P +V   + +                G  +S  F +L I +
Sbjct: 361 KVVEFLITAYIEVF--RGTPMMVQAMMIFYGS---------KLFLGIDMSSMFAALLI-V 408

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  T A++AE++R G+I V  GQ EAA A+G+ H +    V+LPQA+RSI+P L ++++ 
Sbjct: 409 SVNTGAYLAEVIRGGIIGVDDGQSEAAKAIGMNHFQTMTYVVLPQAIRSILPALGNEFVI 468

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +K++S+   +   +L  V  +    T    +   I   IY  L+      +  +  K++
Sbjct: 469 NIKDTSVLNVIAVTELFFVSKSAAGTTYLTFQTFFITAIIYFVLTFTTTRLLRLVERKMS 528



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 11/81 (13%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----------KLVAWICRV 131
           S+Y   +L G   T ++A    +   +IG L+   R               K+V ++   
Sbjct: 310 STYKGQLLKGAATTMYIALISTLVGFLIGLLIAIYRSMPIAESSGIVSILYKVVEFLITA 369

Query: 132 YVEVFRNIPPLVVIFFLYKSV 152
           Y+EVFR  P +V    ++   
Sbjct: 370 YIEVFRGTPMMVQAMMIFYGS 390


>gi|227432357|ref|ZP_03914349.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351878|gb|EEJ42112.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 490

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 18/205 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             VLG V +LF     +       + +  +Y+    + G P LV   + +          
Sbjct: 304 GIVLGTVFALF-----KLSPNAILRIIGNVYVE--YVRGTPLLVQAFMVF---------- 346

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F           F +  +A+   +AA++AEI+RSG+ +V  GQ EA+ +LGL+  K  R
Sbjct: 347 -FGTQVIGLNLSAFAAGALAMGLNSAAYVAEIIRSGINSVDFGQTEASRSLGLSKGKTMR 405

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA+++I+P L ++++ ++K  S+   +G  +L+   G +   + +    ++I   
Sbjct: 406 YVILPQAVKNILPALGNEFVTIIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLVIASL 465

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           IY  L+  I+  +     ++    +
Sbjct: 466 IYFVLTFGISRSLGYAEKRMNRSLR 490



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA   ++   ++GT+    +LS N ++  I  VYVE  R  P LV 
Sbjct: 282 YGNLFVKGTLLTLALAAVAVVLGIVLGTVFALFKLSPNAILRIIGNVYVEYVRGTPLLVQ 341

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 342 AFMVFFGT 349


>gi|121604957|ref|YP_982286.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593926|gb|ABM37365.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 255

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 14/236 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-----TGKALPLLYISTFLI 229
                 +T+       V    LG+ + L     +RH   K       +    +Y+S F  
Sbjct: 22  FWHGLQMTIAVTLICIVQGTALGLAVGLARVAEARHSPAKQLCKYLLRWPAAVYVSFF-- 79

Query: 230 FGLPTLVLIALK-------YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            G P  V I L        +    D  ++              F+S  +AL+  + A+I+
Sbjct: 80  RGTPLFVQILLIHFAVLPLFINPSDGLLISGEAARDLKQNYGAFLSGVVALTLNSGAYIS 139

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+G+ ++ +GQ+EA+ +LG++  +    ++LPQA R ++PPL +  ++LLK+SSL  
Sbjct: 140 EIFRAGIQSIDKGQVEASRSLGMSFPRTMYHIVLPQAFRRMLPPLGNNAISLLKDSSLIS 199

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A+G A+L     T+     +  E  L    +Y  L++ +A  + RL A+    + +
Sbjct: 200 AIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGLAYGVKRLEARYGRGDSR 255



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVY 132
           S YAT    G   T  +    ++  T +G  VG  R++  +          L+ W   VY
Sbjct: 16  SQYATLFWHGLQMTIAVTLICIVQGTALGLAVGLARVAEARHSPAKQLCKYLLRWPAAVY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
           V  FR  P  V I  ++ +VL +   P  
Sbjct: 76  VSFFRGTPLFVQILLIHFAVLPLFINPSD 104


>gi|16263639|ref|NP_436432.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|14524350|gb|AAK65844.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 304

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 14/263 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++I  +      +   P+    +      ++R L   +LT+       V   VLG + ++
Sbjct: 34  LLILLVLYCATMIASNPNFGWDVVADYLFDSRILWGLSLTVWLTVVTMVIGVVLGTIFAI 93

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKPVLGQFN 255
            A              +   YI  F   G P LV +   Y       QL    P    + 
Sbjct: 94  MAMA-----DNVVISTVANAYIWFF--RGTPVLVQLIFWYNLGALFPQLSVGVPFTSLWV 146

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  +T+     +  + L     A+++EI+RSGL++V  GQ +AA +LG+T+ K    +L
Sbjct: 147 SVPTNTLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVDPGQRQAAKSLGMTNGKTLWRIL 206

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAM  IIPP  +Q + +LK SSL   +  ADL+    TI ++  Q I ++++    YL
Sbjct: 207 LPQAMPVIIPPTGNQTIGMLKTSSLVSVISLADLLYSAQTIYSRNFQTIPLLIVACIWYL 266

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
           + + +++    R+    A   ++
Sbjct: 267 AATTILSAVQVRIERHFARSSQR 289



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 36/101 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T WL    M+   ++GT+     ++ N +++ +   Y+  FR  P LV + F 
Sbjct: 66  ILWGLSLTVWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANAYIWFFRGTPVLVQLIFW 125

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y        +          + +    L  P         +
Sbjct: 126 YNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGL 166


>gi|83718672|ref|YP_443032.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|83652497|gb|ABC36560.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 274

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 18/263 (6%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            RN   L V   +Y    +    P    +           L    LT+       +F  V
Sbjct: 30  IRNGAALCVARPVYDCAFAYASSPLQMPITSLLAQSLPVLLQGALLTVKFAVLSMLFGLV 89

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
             +VL+L     SR         L   Y+S  ++ G P LV I + Y   +  P L    
Sbjct: 90  GAVVLALMGIGGSR-----VLAGLARAYVS--VMRGTPLLVQIFVIY---YGLPSL---- 135

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G ++ P   +  IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+
Sbjct: 136 ---GVSLDPT-PAGVIALSANVAAYMSESMRGAINGIEKGQWLAAYSLGLSWRQTLRYVI 191

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L    +Y 
Sbjct: 192 GPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAGVYW 251

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            L  ++         ++AL  + 
Sbjct: 252 VLCQILEWVQRWYERRLALPSRH 274



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 39/95 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   +   ++    +  ++++A + R YV V R  P LV IF 
Sbjct: 68  VLLQGALLTVKFAVLSMLFGLVGAVVLALMGIGGSRVLAGLARAYVSVMRGTPLLVQIFV 127

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +Y  + S+    D +      +  N       ++ 
Sbjct: 128 IYYGLPSLGVSLDPTPAGVIALSANVAAYMSESMR 162


>gi|242240917|ref|YP_002989098.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132974|gb|ACS87276.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 292

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 9/258 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VVI  L  +++      +         F     L     T+           + G++ ++
Sbjct: 40  VVIVVLLAALVHAFSRGNIEWSYVGQFFTAKAILDGVVNTLVMAVLAMALGILFGVIAAI 99

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP--VLGQFNFIGGS 260
                +   H        +     ++  G P ++ + L + L    P   L     +   
Sbjct: 100 MHMSPNPVLHY-------VSVGYAWIFRGTPLILQLLLWFNLALVFPRITLPGVFSVETV 152

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           TV   F +  + LS    A+ +E+VR+GL++V  GQ EAA A+G+   +A R ++LPQAM
Sbjct: 153 TVMTPFFAALLGLSINQGAYTSEVVRAGLLSVDIGQYEAAKAIGMPRLQALRRIILPQAM 212

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R IIPP+ +++++++K +SLA  + +++L+     I     + +E++ +    YL +  +
Sbjct: 213 RVIIPPVGNEFISMIKTTSLASMIQYSELLYNTQNIYYANARVMELLFVAGIWYLMVVTV 272

Query: 381 IALFMNRLNAKIALKEKK 398
           ++   NRL    +   ++
Sbjct: 273 LSFGQNRLEKYFSRGNRR 290



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A AIL G VNT  +A   M    + G +     +S N ++ ++   Y  +FR  P ++ +
Sbjct: 69  AKAILDGVVNTLVMAVLAMALGILFGVIAAIMHMSPNPVLHYVSVGYAWIFRGTPLILQL 128

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 129 LLWFNLAL 136


>gi|312876441|ref|ZP_07736425.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796799|gb|EFR13144.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 220

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++  A       V G+V +LF     R    K    +   Y+  F   G P L
Sbjct: 14  LKASVVTIELTAIAVTIGLVFGLVAALF-----RISKIKVLNYIGSFYVWLF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I   Y              I  +   P F++  IAL   + A+ AEI+R+ ++++ RG
Sbjct: 67  LQIFFIYY---------GLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+     
Sbjct: 118 QYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +QTG+  EI +  + IYL+L+ + +   N L  ++   E++
Sbjct: 178 KASQTGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L   V T  L    +    + G +    R+S  K++ +I   YV +FR  P L+ 
Sbjct: 9   YFPVLLKASVVTIELTAIAVTIGLVFGLVAALFRISKIKVLNYIGSFYVWLFRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLP 157
           IFF+Y  +  ++P
Sbjct: 69  IFFIYYGLPKIVP 81


>gi|237650335|ref|ZP_04524587.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974]
 gi|237822023|ref|ZP_04597868.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CCRI 1974M2]
          Length = 521

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 VLNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +    ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|194397297|ref|YP_002037131.1| amino acid ABC transporter amino acid-binding protein/permease
           [Streptococcus pneumoniae G54]
 gi|194356964|gb|ACF55412.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae G54]
          Length = 521

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 VLNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +    ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 36.8 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|78355214|ref|YP_386663.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217619|gb|ABB36968.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 251

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 114/262 (43%), Gaps = 13/262 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R IP    +     +  S        +   F   +           ++    I V   V 
Sbjct: 3   RAIPMPFFMHRHADATHSPGRTTRGFMAFQFKPEVMLDTAPLLWDGIELTIIITVLGLVF 62

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G ++      L R    +   A+ + Y+    I G P +V +     L+F  P++     
Sbjct: 63  GFIIGTLVG-LGRISRNRLCNAVAVSYVEA--IRGTPLIVQVMF---LYFGLPLVLGIRI 116

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P   +  +A++  + A+IAEIVR  + ++  GQMEA  ++GLTH +    ++ 
Sbjct: 117 -------PPVTAGVVAIAVNSGAYIAEIVRGSIQSINTGQMEAGRSIGLTHLQTMLYIIW 169

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA + +IPPL +Q++  LK++SL V +G  +L   G  II    +A E+ L    +YL 
Sbjct: 170 PQAFKRMIPPLGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAIMYLC 229

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           +++ ++  +     K+  +  +
Sbjct: 230 MTLTLSQVLRMYERKLNARTSR 251



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 35/67 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  +   G++   IIGTLVG GR+S N+L   +   YVE  R  P +V + FL
Sbjct: 45  LWDGIELTIIITVLGLVFGFIIGTLVGLGRISRNRLCNAVAVSYVEAIRGTPLIVQVMFL 104

Query: 149 YKSVLSV 155
           Y  +  V
Sbjct: 105 YFGLPLV 111


>gi|317495050|ref|ZP_07953422.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Gemella
           moribillum M424]
 gi|316914822|gb|EFV36296.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Gemella
           moribillum M424]
          Length = 213

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 13/187 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L++    K    L  +Y+   +I   P LV I + Y           F           F
Sbjct: 39  LAKISTIKVLNVLATIYVE--VIRNTPILVQIMIIY-----------FALPEVGISFTPF 85

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           MS  IALS  + A+++EI RSG++A+ +GQMEA  +LGL++ +  + ++LPQA+++ +P 
Sbjct: 86  MSAIIALSINSGAYVSEIFRSGILAIDKGQMEAGRSLGLSYFQTMKFIILPQALKNSLPA 145

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +++++L+K SS+   VG AD++    T+ N T +     LI   IY  ++ +++  + 
Sbjct: 146 LGNEFISLVKESSIVYFVGVADIMFAANTVKNATYETFGPYLIAAAIYFIITSVLSFLVK 205

Query: 387 RLNAKIA 393
           RL  K+A
Sbjct: 206 RLEKKLA 212



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y T  +   V T  ++   ++   ++G ++   ++S  K++  +  +YVEV RN
Sbjct: 2   FDFLPKYYTTYIDATVTTLKVSLIALLIGLLLGIVICLAKISTIKVLNVLATIYVEVIRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P LV I  +Y ++  V       +     + +N+             A 
Sbjct: 62  TPILVQIMIIYFALPEVGISFTPFMSAIIALSINSGAYVSEIFRSGILAI 111


>gi|303229872|ref|ZP_07316648.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-134-V-Col7a]
 gi|303232148|ref|ZP_07318851.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302513254|gb|EFL55293.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302515428|gb|EFL57394.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 216

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 116/220 (52%), Gaps = 17/220 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+   A    F F++G+++SL     +R  +    + +   Y+   +I G P L
Sbjct: 14  LYGALMTIKITAVAVSFGFIIGLIVSL-----ARMSNFVIVRLIAKCYVD--VIRGTPML 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y   F  P +         T    +++   A S  + A+++EI R+G+ +V +G
Sbjct: 67  VQIFMIY---FALPQIIG-------TRIDPYIAACAACSINSGAYVSEIFRAGIQSVNKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEA  +LGL+  +  R +++PQA ++ IPPL ++++ +LK+SSL   +GF +L+  G  
Sbjct: 117 QMEAGRSLGLSWWQTMRFIIIPQAFKASIPPLGNEFIAMLKDSSLVSVIGFEELMRRGQL 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           II +T  A EI      IYL ++I I+  +  L  K  +K
Sbjct: 177 IIAKTYAATEIWGTVAIIYLCMTIPISRLVAYLERKYNVK 216



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 36/76 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    +    IIG +V   R+S   +V  I + YV+V R  P LV IF +
Sbjct: 13  LLYGALMTIKITAVAVSFGFIIGLIVSLARMSNFVIVRLIAKCYVDVIRGTPMLVQIFMI 72

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++  ++       +
Sbjct: 73  YFALPQIIGTRIDPYI 88


>gi|70733920|ref|YP_257560.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348219|gb|AAY95825.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 320

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R     T + L  +Y+   L+ G P LV I + Y             FIG         +
Sbjct: 147 RLSSNPTLRDLSTIYVE--LVRGTPLLVQIFIFY------------FFIGTVLNLSREFA 192

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              ALS +T A++AEIVR+G+ ++ RGQ EAA +LGL+  ++ R V+LPQA + ++PPL 
Sbjct: 193 GIAALSLFTGAYVAEIVRAGVQSIARGQNEAARSLGLSAGQSMRHVVLPQAFKRVLPPLA 252

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            Q+++L+K++SL   +   +L+  G  +I  +    EI+     +YL +++ ++   +RL
Sbjct: 253 GQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKMASRL 312

Query: 389 NAKIALKE 396
             ++A  +
Sbjct: 313 ERRLAQSD 320



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T WL+    +   +IG   G  RLS+N  +  +  +YVE+ R  P LV IF  
Sbjct: 118 LLWGLWTTLWLSVVSGVLGLLIGLGTGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 177

Query: 149 YKSV 152
           Y  +
Sbjct: 178 YFFI 181


>gi|94985165|ref|YP_604529.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM
           11300]
 gi|94555446|gb|ABF45360.1| amino acid ABC transporter membrane protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 263

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/214 (30%), Positives = 116/214 (54%), Gaps = 8/214 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S ++G+++ + A  + R       +A   L+I    I G P LV I   Y 
Sbjct: 58  QMTLQLTLVSGLIGLLVGIVAG-IMRTSSLWIARAPAGLFIWF--IRGTPLLVQILFVYN 114

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +      IG      EF S  IAL+    A+ AE++R+G++AVPRGQ+EAA +L
Sbjct: 115 -----ALPPLLAAIGLKVELDEFWSAVIALALNVGAYNAEVIRAGILAVPRGQVEAARSL 169

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V+LPQA+R ++PPL +  + LLK+SSLA  +   +L   G  + ++T Q 
Sbjct: 170 GLSGVQTMRTVVLPQALRIVVPPLVNNLVALLKDSSLASTISLLELTLAGSRVSSETFQP 229

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + ++     +YL+L+ ++ LF ++L  ++ +  +
Sbjct: 230 VPVLTTIAAVYLALTTVMTLFTDQLEKRVKIATR 263



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  L     +   ++G + G  R S+  +      +++   R  P LV I F+
Sbjct: 53  FVQGAQMTLQLTLVSGLIGLLVGIVAGIMRTSSLWIARAPAGLFIWFIRGTPLLVQILFV 112

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 113 YNALP 117


>gi|253700904|ref|YP_003022093.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           sp. M21]
 gi|251775754|gb|ACT18335.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M21]
          Length = 261

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 111/225 (49%), Gaps = 15/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L F    +    ++ + + +L IVL LF   L R    +       LY+   +I
Sbjct: 50  DPYLNILKFVPDGILVTFQVTLGAILLAIVLGLFTG-LGRISKNRFINGTASLYVE--II 106

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV I   Y              +G     P  +S  IA++    A++ E+VR+G+
Sbjct: 107 RGIPLLVQIFYIYY------------ALGSFVQVPPILSAIIAMAVCYGAYMGEVVRAGI 154

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EAA++LG+  R+    V+LPQA++ I+PP+ ++++ LLK+SSL   +  ADL
Sbjct: 155 ESIHKGQREAALSLGMNGRQTMIHVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADL 214

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  G    +++    E   +   IYL +++  +  +  +  ++++
Sbjct: 215 LRRGREFASESFTYFETYTVIALIYLIITLFFSKIIGVMEERVSV 259



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 40/69 (57%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++ A ++G   G GR+S N+ +     +YVE+ R IP LV IF++Y +
Sbjct: 62  GILVTFQVTLGAILLAIVLGLFTGLGRISKNRFINGTASLYVEIIRGIPLLVQIFYIYYA 121

Query: 152 VLSVLPIPD 160
           + S + +P 
Sbjct: 122 LGSFVQVPP 130


>gi|302337059|ref|YP_003802265.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634244|gb|ADK79671.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 225

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 15/236 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             + P+   +                +I     + G+VL L A  L      K    +  
Sbjct: 2   EHIFPWDFSVIPAKFLLFRDAALLTLEITTLGILTGLVLGLIA-ALGTISRNKVAHGVSS 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YI  FLI G P L+ + + Y              +      P F S  IAL  +  A+I
Sbjct: 61  AYI--FLIRGTPLLLQLFIIYY------------GLTTVVTIPPFPSAIIALGVHNGAYI 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R  + ++  GQMEAA +LG+  RKA R ++LPQA +  +P L +Q++  LK+SSLA
Sbjct: 107 AEIFRGSIQSIHYGQMEAARSLGMPRRKAMRRIILPQAFKRAVPSLGNQFIIALKDSSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L+  G  + + T   +E+++I    YL ++ ++ + ++RL  ++ + ++
Sbjct: 167 STIAVPELLLKGRQLGSSTFMYMEMLIIVAIWYLIMTSVLTIGVHRLEKRLRVSDR 222



 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 37/83 (44%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           + T  +   G++   ++G +   G +S NK+   +   Y+ + R  P L+ +F +Y  + 
Sbjct: 24  LLTLEITTLGILTGLVLGLIAALGTISRNKVAHGVSSAYIFLIRGTPLLLQLFIIYYGLT 83

Query: 154 SVLPIPDHSIVLPFGMFLNNRGL 176
           +V+ IP     +      N   +
Sbjct: 84  TVVTIPPFPSAIIALGVHNGAYI 106


>gi|325978020|ref|YP_004287736.1| inner membrane amino-acid ABC transporter permease yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|325177948|emb|CBZ47992.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 517

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               + V S +L +VL    T  +R         L  LYI   ++ GLP LV+++L +  
Sbjct: 19  MTVFLSVVSMILALVLGGVVTA-ARMSDNLLISGLTKLYIE--VVRGLPMLVILSLFFYG 75

Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L F+ P    F            +S  I L+   + F+AEI RSG+ AV  GQ E A
Sbjct: 76  LPELGFNVPDGSLFG-----VDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGA 130

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G    +  R V++PQA ++I+P L +++ N +K+SS A  +G ADL+    TI   +
Sbjct: 131 RSIGFNKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTIQGIS 190

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +  + ++    +YL  +      +     K++  
Sbjct: 191 YKPFQAVIAVGIVYLLFTFSTTRIVAHYEKKMSRS 225



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 46/88 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y + IL G + T +L+   MI A ++G +V A R+S N L++ + ++Y+EV R +P L
Sbjct: 7   QNYGSFILDGALMTVFLSVVSMILALVLGGVVTAARMSDNLLISGLTKLYIEVVRGLPML 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           V++   +  +  +        +    + 
Sbjct: 67  VILSLFFYGLPELGFNVPDGSLFGVDLD 94


>gi|288905048|ref|YP_003430270.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Streptococcus gallolyticus UCN34]
 gi|288731774|emb|CBI13337.1| putative amino acid ABC transporter, amino acid-binding/permease
           protein [Streptococcus gallolyticus UCN34]
          Length = 517

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               + V S +L +VL    T  +R         L  LYI   ++ GLP LV+++L +  
Sbjct: 19  MTVFLSVVSMILALVLGGVVTA-ARMSDNLLISGLTKLYIE--VVRGLPMLVILSLFFYG 75

Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L F+ P    F            +S  I L+   + F+AEI RSG+ AV  GQ E A
Sbjct: 76  LPELGFNVPDGSLFG-----VDLDRLISALIGLTVGESVFVAEIYRSGIQAVDSGQFEGA 130

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G    +  R V++PQA ++I+P L +++ N +K+SS A  +G ADL+    TI   +
Sbjct: 131 RSIGFNKFQTYRYVIIPQAFKNILPTLGNEFANNIKSSSQASVIGVADLMFTASTIQGIS 190

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +  + ++    +YL  +      +     K++  
Sbjct: 191 YKPFQAVIAVGIVYLLFTFSTTRIVAHYEKKMSRS 225



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 46/88 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y + IL G + T +L+   MI A ++G +V A R+S N L++ + ++Y+EV R +P L
Sbjct: 7   QNYGSFILDGALMTVFLSVVSMILALVLGGVVTAARMSDNLLISGLTKLYIEVVRGLPML 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           V++   +  +  +        +    + 
Sbjct: 67  VILSLFFYGLPELGFNVPDGSLFGVDLD 94


>gi|161520629|ref|YP_001584056.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189353185|ref|YP_001948812.1| ABC-type polar amino acid transport system ATPase component
           [Burkholderia multivorans ATCC 17616]
 gi|160344679|gb|ABX17764.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189337207|dbj|BAG46276.1| ABC-type polar amino acid transport system ATPase component
           [Burkholderia multivorans ATCC 17616]
          Length = 500

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                     +  +        + +  +  ++V   +LG  ++L     +R  H+   K 
Sbjct: 1   MQFDWHYALQLLWDKDFWRACVVVVKLSVSVWVLGVLLGFPVAL-----ARQSHQPALKR 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    LP LVL+   Y L    P          + +S  F +  IA+     
Sbjct: 56  AAAVYIWFF--RSLPLLVLLVFIYNLPQVFPA-------TSTVLSDPFTAGLIAMVLSET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R G+++VPRGQ+EA  ALG+      R++++PQ +R  +P L ++++ ++K +
Sbjct: 107 AYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQVIRIALPALANEFITIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q     E +L   F Y+ +  + +  +  L   + +  +
Sbjct: 167 SLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFSRLLGYLERHLDVSRR 225



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 64/177 (36%), Gaps = 8/177 (4%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
              ++G  V   R S    +     VY+  FR++P LV++ F+Y  +  V P     +  
Sbjct: 34  LGVLLGFPVALARQSHQPALKRAAAVYIWFFRSLPLLVLLVFIYN-LPQVFPATSTVLSD 92

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFS----FVLGIVLSLFATRLSRHFHEK--TGKAL 219
           PF   L    LS      + +    +         G  L +  T + R          AL
Sbjct: 93  PFTAGLIAMVLSETAYFAEIHRGGILSVPRGQLEAGRALGIRFTGIQRMIVMPQVIRIAL 152

Query: 220 PLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           P L      I  L +LV +I+L   L   + +  Q   +  + ++  F  + I    
Sbjct: 153 PALANEFITIVKLTSLVSVISLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVF 209


>gi|330962037|gb|EGH62297.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 222

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   +      L     T+  +        VLG  L+L      R    K    L  
Sbjct: 3   EESLQLALDSAPFLLKGAYYTVFLSLGGMFCGLVLGFGLALM-----RLSRFKPLNWLAR 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+S F   G P LV + L Y   +  P L                +  I  S   AA+ 
Sbjct: 58  IYVSFF--RGTPLLVQLFLIY---YGLPEL--------GIELDPLTAALIGFSLNMAAYA 104

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+RS + ++ RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + +++L+K+++LA
Sbjct: 105 CEILRSAISSIERGQWEAAASIGMTRWQTLRRAILPQAARTALPPLGNSFISLVKDTALA 164

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   +L      I  +T +   + L    IY  L+  ++   NRL A++   +
Sbjct: 165 ATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSYLQNRLEARVNRHD 219



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  K + W+ R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFCGLVLGFGLALMRLSRFKPLNWLARIYVSFFRGTPLLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G  LN 
Sbjct: 76  YYGLPELGIELDPLTAALIGFSLNM 100


>gi|291454091|ref|ZP_06593481.1| permease [Streptomyces albus J1074]
 gi|291357040|gb|EFE83942.1| permease [Streptomyces albus J1074]
          Length = 286

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 9/258 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++      SV+      D +       F N+R LS    T+       V   V G++L++
Sbjct: 11  LIALAALGSVVYAFSQGDINWAFIPDYFFNDRILSGVRETLILTVLSMVIGVVGGVLLAV 70

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGS 260
                 R        ++   YI  F   G P LV + + + L F  +   LG F     S
Sbjct: 71  M-----RLSKNPVVSSIAWFYIWFF--RGTPVLVQLFVWFNLGFVFEYMNLGPFYKDEWS 123

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F++  + L    AA++AEI R+GL++V  GQ EAA ALG++  K  R ++LPQAM
Sbjct: 124 DFMTPFLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEAAHALGMSQGKTLRRIVLPQAM 183

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R I+PP  ++ +N+LK +SL  AV + +L      I   +G  +E + +    YL L+ +
Sbjct: 184 RVIVPPTGNEVINMLKTTSLVAAVQYYELFKHAQDIGMTSGATVEALFLAATWYLILTSI 243

Query: 381 IALFMNRLNAKIALKEKK 398
           +++    +    A    +
Sbjct: 244 LSIGQYYIERYYARGSLR 261



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 3/106 (2%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I+   +P   D  +   IL G   T  L    M+   + G L+   RLS N +V+ I  
Sbjct: 28  DINWAFIP---DYFFNDRILSGVRETLILTVLSMVIGVVGGVLLAVMRLSKNPVVSSIAW 84

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            Y+  FR  P LV +F  +        +                 L
Sbjct: 85  FYIWFFRGTPVLVQLFVWFNLGFVFEYMNLGPFYKDEWSDFMTPFL 130


>gi|254519389|ref|ZP_05131445.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226913138|gb|EEH98339.1| amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 482

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 11/211 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + S ++ +V+ +    L R  + K  K L  +YIS   + G P LV + L   L
Sbjct: 283 TTLSLSIISMIIALVIGVII-ALIRINNIKILKQLVEVYISF--LRGTPLLVQLFL---L 336

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P +     I        + +  I L+   +A+IAE +R    A+ +GQMEAA+++G
Sbjct: 337 YFGLPQI-----IPQLKGITAYTAAVIGLALNASAYIAESLRGAFDAIDKGQMEAALSVG 391

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  + +++PQ  R  +P L + +++ +K SSLA  +G  + ++        + +  
Sbjct: 392 MTKMQGMKRIVMPQMFRVAVPSLGNVFVDNIKGSSLAFTLGVTEALARAQMSAAASYRFF 451

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E  +    +Y S   +  +    +  K+++ 
Sbjct: 452 ESYIAVAIVYWSTISVYNVIQKSIENKLSVY 482



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 36/70 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  L+   MI A +IG ++   R++  K++  +  VY+   R  P LV +F L
Sbjct: 277 IISGLKTTLSLSIISMIIALVIGVIIALIRINNIKILKQLVEVYISFLRGTPLLVQLFLL 336

Query: 149 YKSVLSVLPI 158
           Y  +  ++P 
Sbjct: 337 YFGLPQIIPQ 346


>gi|300087519|ref|YP_003758041.1| polar amino acid ABC transporter inner membrane subunit
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527252|gb|ADJ25720.1| polar amino acid ABC transporter, inner membrane subunit
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 275

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +++L +V+ LF   L R    K    L  +Y+   +I G+P LV +   Y  
Sbjct: 64  VTILVTISAYLLMLVVGLFGG-LGRLAKNKFIFGLATIYVE--VIRGIPLLVQLIGWY-- 118

Query: 245 HFDKPVLGQ-----FNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            F  PV+ Q      NF           ++  IA++    A+++EIVR+G+ +VP+GQME
Sbjct: 119 -FASPVVIQAVGEWLNFAPLMEYRANPIVTAIIAITVCYGAYMSEIVRAGIQSVPKGQME 177

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LG+ H +A R V+LPQA R I+PP+ ++++ LLK+SSL   V  ADL   G   ++
Sbjct: 178 AARSLGMNHFQAMRFVILPQAFRVILPPMGNEFIALLKDSSLVSVVAVADLTRRGREFMS 237

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                IE   +   +YL +++  +  ++ +  K
Sbjct: 238 AHFNPIETWTMVALLYLIMTLFASRLVSYIEKK 270



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 37/95 (38%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  +  S  +   ++G   G GRL+ NK +  +  +YVEV R IP LV +   Y +
Sbjct: 61  GVAVTILVTISAYLLMLVVGLFGGLGRLAKNKFIFGLATIYVEVIRGIPLLVQLIGWYFA 120

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
              V+      +     M      +    + +   
Sbjct: 121 SPVVIQAVGEWLNFAPLMEYRANPIVTAIIAITVC 155


>gi|168490636|ref|ZP_02714779.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
 gi|183574959|gb|EDT95487.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC0288-04]
          Length = 521

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 ILNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +    ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMCKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKVIYSLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|329295893|ref|ZP_08253229.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 292

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/287 (20%), Positives = 127/287 (44%), Gaps = 9/287 (3%)

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           V  GR+  +  +     V    +  I    VI  L   +++     +         F   
Sbjct: 11  VNNGRVQPHYDLDRYQVVPRRYYGRITASAVILVLLALLVNAFAHGNIEWSFVGQFFTAQ 70

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L+    T+  +        + G++ ++                + + Y   F   G P
Sbjct: 71  AILNGVVNTLIMSVLAMALGILFGVITAIMYM-----SPNPVLHYIAVGYAWIF--RGTP 123

Query: 234 TLVLIALKYQLHFDKPVLG--QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            ++ + L + L    P +       +   TV   F++  + LS    A+ +E+VR+GL++
Sbjct: 124 LILQLLLWFNLALVFPTINIPGLFSVQTVTVMTPFLAALLGLSINQGAYTSEVVRAGLLS 183

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA A+G+   +A + ++LPQAMR I+PP+ +++++++K +SLA  + +++L+ 
Sbjct: 184 VDTGQYEAAKAIGMPRLQALQRIILPQAMRVILPPVGNEFISMIKTTSLASMIQYSELLY 243

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              TI     + +E++ +    YL +  +++   ++L    +   ++
Sbjct: 244 NAQTIYFANARVMELLFVAGIWYLIIVTLLSFGQSQLERYFSRGHRR 290



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A AIL G VNT  ++   M    + G +     +S N ++ +I   Y  +FR  P ++ +
Sbjct: 69  AQAILNGVVNTLIMSVLAMALGILFGVITAIMYMSPNPVLHYIAVGYAWIFRGTPLILQL 128

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 129 LLWFNLAL 136


>gi|158319239|ref|YP_001511746.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158139438|gb|ABW17750.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 226

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 117/225 (52%), Gaps = 6/225 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            +   F  +       +  F+  LG+VL +F   L R    K    +   Y+   +I G 
Sbjct: 7   PKYYQFFIIGAKNTVLLAFFTVALGVVLGIFL-ALMRISKNKILNFIGTAYVE--IIRGT 63

Query: 233 PTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P LV I + Y  L      +   +F+G +    EF++  IALS  + A++AEI+RSG+ +
Sbjct: 64  PLLVQIFIVYYGLPMMGFKIPALSFLGSAGE--EFIAGIIALSINSGAYVAEIIRSGIQS 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LG+ +  A + +++PQA ++I+P L ++++ ++K SS+   +G  +L+ 
Sbjct: 122 VDKGQMEAARSLGMPYPMAMKHIIIPQAFKNILPALGNEFIVVIKESSVMSVIGIHELMY 181

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              T+   T   +E +++   IY  L+  ++  +     ++ + +
Sbjct: 182 NANTVRGNTFIPLEPLIVAAGIYFILTFSLSKLLGIAERRMRVSD 226



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 38/81 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    ++G  NT  LAF  +    ++G  +   R+S NK++ +I   YVE+ R  P LV 
Sbjct: 9   YYQFFIIGAKNTVLLAFFTVALGVVLGIFLALMRISKNKILNFIGTAYVEIIRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           IF +Y  +  +         L
Sbjct: 69  IFIVYYGLPMMGFKIPALSFL 89


>gi|288575077|ref|ZP_06393434.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570818|gb|EFC92375.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 520

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/238 (28%), Positives = 104/238 (43%), Gaps = 14/238 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
            +                   +        T  ++ + + VL +VL L    + R F   
Sbjct: 275 WIESHRPDATWKDTARRYVSFMPKLGRAAITTIEVSLAAMVLAVVLGLCL-AIVRVFGPA 333

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
               L   Y+   +I G P L+ +   +   +  P +       G  + P F +  I L 
Sbjct: 334 PLAVLSTWYVE--IIRGTPVLIQLFFIF---YGLPNV-------GIKLDP-FTAGVIGLG 380

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ AEI R+GL+AVP GQMEAA+ LG+T R+A R V++PQA+R ++PP+T+ +++L
Sbjct: 381 LNYAAYEAEIYRAGLMAVPAGQMEAALGLGMTRREALRHVVVPQAVRMVLPPVTNDFISL 440

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LK+SSL   +   DL    G I           LI   IY  L            AK+
Sbjct: 441 LKDSSLVSVITLVDLTKAYGQIATTYYDYFGTGLIVAAIYFLLGYPFIRLARWNEAKL 498



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 3/129 (2%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           + T  ++ + M+ A ++G  +   R+     +A +   YVE+ R  P L+ +FF++  + 
Sbjct: 304 ITTIEVSLAAMVLAVVLGLCLAIVRVFGPAPLAVLSTWYVEIIRGTPVLIQLFFIFYGLP 363

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           +V    D       G+ LN              A   V +  +   L L  TR     H 
Sbjct: 364 NVGIKLDPFTAGVIGLGLNYAAYEAEIYRAGLMA---VPAGQMEAALGLGMTRREALRHV 420

Query: 214 KTGKALPLL 222
              +A+ ++
Sbjct: 421 VVPQAVRMV 429


>gi|116672451|ref|YP_833384.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116612560|gb|ABK05284.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 352

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/271 (22%), Positives = 127/271 (46%), Gaps = 15/271 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +   VV   +   V S+   P     +    F     ++    T+   A      FV
Sbjct: 60  WRWVGTAVVALGVAAVVWSLATNPRWEWGVVAQWFTAQSVVNGLVETLKLTAISGALGFV 119

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
           LG +L+L     S          + + +  +++    P LV + L Y L +    +    
Sbjct: 120 LGFILALMRLSASPLL-------VSVSWTFSWIFRSTPLLVQMLLWYNLGYLYEKISLGI 172

Query: 252 ----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                +F  +  +T+  +F +  + L+   AA+ AEI+R G+++V +GQ+EAA ALG+  
Sbjct: 173 PFTDVRFFEVQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGILSVDQGQLEAAAALGIPA 232

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            + +  ++LPQAMR+I+P   ++ + L+K +S+   + +++L      I N+T Q + ++
Sbjct: 233 WRRSTRIVLPQAMRAILPTAFNEIIGLVKGTSIVYVLAYSELFYTVQVIYNRTQQVLPLL 292

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+    Y+ ++ ++++F   +    +    +
Sbjct: 293 LVATLWYVVITSVLSVFQYYIERHYSKGAVR 323



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A +++ G V T  L         ++G ++   RLSA+ L+  +   +  +FR+ P LV +
Sbjct: 96  AQSVVNGLVETLKLTAISGALGFVLGFILALMRLSASPLLVSVSWTFSWIFRSTPLLVQM 155

Query: 146 FFLYK 150
              Y 
Sbjct: 156 LLWYN 160


>gi|170724143|ref|YP_001751831.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169762146|gb|ACA75462.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 222

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 18/235 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L   +      L     T+  +     F  VLG  L+L      R         L  +Y
Sbjct: 5   SLQLVVDSAPFLLKGAGYTVLLSVGGMFFGLVLGFALALM-----RLSKILPLDWLARIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +S F   G P LV + + Y           F             +  I LS   AA+I E
Sbjct: 60  VSFF--RGTPLLVQLFVIY-----------FGMPQIGIELDPIPASLIGLSLNMAAYICE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+ + ++ RGQ EAA ++G+T  +A R  +LPQA+R+ +PPL + +++L+K+++LA  
Sbjct: 107 ILRAAISSIDRGQWEAAASIGMTRTQAMRRAILPQALRTALPPLGNSFISLVKDTALAAT 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +L      I  +T +   + L    +Y  L  ++A F NR+ A++   +++
Sbjct: 167 IQVPELFRQAQLITARTFEVFTMYLAVAVVYWILCSILAHFQNRMEARVNQHDQE 221



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RLS    + W+ R+YV  FR  P LV +F +
Sbjct: 16  LLKGAGYTVLLSVGGMFFGLVLGFALALMRLSKILPLDWLARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G+ LN 
Sbjct: 76  YFGMPQIGIELDPIPASLIGLSLNM 100


>gi|170016703|ref|YP_001727622.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803560|gb|ACA82178.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 482

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 17/217 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+       V + + GI+L +              +A+    I  F       
Sbjct: 280 FLQGLWQTVILTVFAIVLASIWGILLGVMG-----VSQLPWIRAISTTIIYLFR-----G 329

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+ L + ++   P +         T  P F +  + L     A+ A  VR G  AV R
Sbjct: 330 LPLMVLAFFIYIGLPGVIG-------TKIPAFTAGLLTLILNEGAYTAAFVRGGFEAVDR 382

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL + K+ R V++PQ ++ +IP   +Q++  LK++S+  A+G  +L   G 
Sbjct: 383 GQMEAARSLGLPYSKSMRRVIMPQGLKIMIPSFINQFIITLKDTSILSAIGILELTQTGS 442

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I+++  Q   +  I   IYL +  ++    N +  +
Sbjct: 443 LIVSRNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKR 479



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 32/66 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  L    ++ A+I G L+G   +S    +  I    + +FR +P +V+ FF
Sbjct: 279 AFLQGLWQTVILTVFAIVLASIWGILLGVMGVSQLPWIRAISTTIIYLFRGLPLMVLAFF 338

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 339 IYIGLP 344


>gi|325478268|gb|EGC81387.1| ABC transporter, permease protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 521

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 12/187 (6%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           ++  K    +   Y+  F   G P +V   + +        L Q+  I  ST+     + 
Sbjct: 335 YYFHKLINWILGAYVEIF--RGTPMMVQSVIIFY------GLKQYFDIDLSTMF----AA 382

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + +S  T A+++E+VR G+ ++ +GQ EA  A+GL+  +    V+LPQ +R+I+P L +
Sbjct: 383 ILIVSINTGAYLSEVVRGGINSIDKGQFEACKAIGLSEAQTMTSVILPQTIRTILPSLGN 442

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++  +K++S+   +   +L  +  ++   T Q     LI   IY  L+  I   +  L 
Sbjct: 443 EFVINIKDTSVLNVISVTELFFMSKSVAGSTYQYFPTYLITAVIYFVLTFTITRILLLLE 502

Query: 390 AKIALKE 396
            K + K+
Sbjct: 503 RKFSDKD 509



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 12/86 (13%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA------------NKLVAWICR 130
           S+Y++  L G VNT ++A    +   ++G +V   R               +KL+ WI  
Sbjct: 287 STYSSLFLRGVVNTLFIAILSTLLGFLLGLVVAVIRRMDVKKTDNKFSYYFHKLINWILG 346

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVL 156
            YVE+FR  P +V    ++  +    
Sbjct: 347 AYVEIFRGTPMMVQSVIIFYGLKQYF 372


>gi|301300302|ref|ZP_07206510.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300852105|gb|EFK79781.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 485

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 17/221 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   L+    T+       + + + GI++             K  + +    I  F   G
Sbjct: 280 SGVFLNGLWKTIYLTILGIIGATIFGIIIGFLG-----VIPNKFAQGISTTVIYIF--RG 332

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         T  P F++  I L+    A+ A  V+ G+ A
Sbjct: 333 LPLLVLALFIYN---GIPSLTG-------TKIPAFIAGIITLTLNEGAYTAAFVKGGIEA 382

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL+  KA + ++LPQ ++ ++P   +Q++  LK++S+   +G  +L  
Sbjct: 383 VDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLKDTSILSIIGILELTQ 442

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  +  ++  I   +YL +  ++    N L  K+
Sbjct: 443 TGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 34/68 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T +L   G+I ATI G ++G   +  NK    I    + +FR +P LV+  F
Sbjct: 282 VFLNGLWKTIYLTILGIIGATIFGIIIGFLGVIPNKFAQGISTTVIYIFRGLPLLVLALF 341

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 342 IYNGIPSL 349


>gi|197118314|ref|YP_002138741.1| amino acid ABC transporter membrane protein [Geobacter bemidjiensis
           Bem]
 gi|197087674|gb|ACH38945.1| amino acid ABC transporter, membrane protein [Geobacter
           bemidjiensis Bem]
          Length = 272

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 15/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L F    +    ++ + + +L IV  LF   L R    +       LY+   +I
Sbjct: 61  DPYLNILKFVPDGILVTFQVTLGAILLAIVFGLFTG-LGRISKNRFLNGAASLYVE--II 117

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV I   Y              +G     P  +S  IA++    A++ E+VR+G+
Sbjct: 118 RGIPLLVQIFYIYY------------ALGRFVQVPPILSAIIAMAVCYGAYMGEVVRAGI 165

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EAA++LG+  R+    V+LPQA++ I+PP+ ++++ LLK+SSL   +  ADL
Sbjct: 166 ESIHKGQREAALSLGMNGRQTMIHVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADL 225

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  G    +++    E   +   IYL +++  +  +  +  ++++
Sbjct: 226 LRRGREFASESFTYFETYTVIALIYLIITLFFSKIIGVMEERVSV 270



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    ++ A + G   G GR+S N+ +     +YVE+ R IP LV IF++Y +
Sbjct: 73  GILVTFQVTLGAILLAIVFGLFTGLGRISKNRFLNGAASLYVEIIRGIPLLVQIFYIYYA 132

Query: 152 VLSVLPIPD 160
           +   + +P 
Sbjct: 133 LGRFVQVPP 141


>gi|268678765|ref|YP_003303196.1| polar amino acid ABC transporter inner membrane subunit
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268616796|gb|ACZ11161.1| polar amino acid ABC transporter, inner membrane subunit
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 321

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/208 (25%), Positives = 100/208 (48%), Gaps = 19/208 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              + +F +G +L+       R  H +  K +  +YI   +I G P LV I + Y +   
Sbjct: 130 LAAILAFSMGALLAFM-----RISHYQFLKDIATIYI--AIIRGTPLLVQIFIFYFI--- 179

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                    I        F +  I+L  +  A+IAE++R  + ++ +GQ EAA +LG+ +
Sbjct: 180 ---------IATIFEIERFFAGAISLGLFFGAYIAEVLRGAIQSIDKGQYEAAKSLGMNY 230

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    +++PQA++  +P L  + + L+K+SSL   +   DL  VG  I+  T    E  
Sbjct: 231 PQTMLYIIMPQALKRALPTLVGEMIALVKDSSLVSVISITDLTKVGREIVANTFSPFETW 290

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395
           LI   +Y  ++ ++  F +++  K+  +
Sbjct: 291 LIIAAVYFMITFLLTAFGHKIETKMKKQ 318



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 31/64 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  ++    I A  +G L+   R+S  + +  I  +Y+ + R  P LV IF  
Sbjct: 117 LVEGLLVTLEISGLAAILAFSMGALLAFMRISHYQFLKDIATIYIAIIRGTPLLVQIFIF 176

Query: 149 YKSV 152
           Y  +
Sbjct: 177 YFII 180


>gi|332077738|gb|EGI88199.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 521

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 8/173 (4%)

Query: 228 LIFGLPTLVLIAL--KYQLHFDKPVLGQFNFIGGSTVS------PEFMSLYIALSCYTAA 279
           +I+GL  LV   L    ++    P++ Q   I   T           ++    +S  T A
Sbjct: 331 VIYGLQKLVGWGLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGA 390

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S
Sbjct: 391 YMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTS 450

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 451 VLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503


>gi|325272374|ref|ZP_08138772.1| amino acid ABC transporter permease [Pseudomonas sp. TJI-51]
 gi|324102499|gb|EGB99947.1| amino acid ABC transporter permease [Pseudomonas sp. TJI-51]
          Length = 222

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  VLG  L+L      R         L  +Y+S F   G 
Sbjct: 14  PFLLKGAGYTVLLSVGGMFFGLVLGFALALM-----RLSKVLPLNWLARIYVSFF--RGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + Y           F             +  I LS   AA+I EI+R+ + ++
Sbjct: 67  PLLVQLFVIY-----------FGMPQIGIELDPIPASLIGLSLNMAAYICEILRAAISSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA ++G+T  +A R  +LPQA+R+ +PPL + +++L+K+++LA  +   +L   
Sbjct: 116 DRGQWEAAASIGMTRVQAMRRAILPQALRTALPPLGNSFISLVKDTALAATIQVPELFRQ 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I  +T +   + +    IY  L  ++A F NR+ A++   +++
Sbjct: 176 AQLITARTFEVFTMYVAVAVIYWVLCSILAHFQNRMEARVNQHDQE 221



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RLS    + W+ R+YV  FR  P LV +F +
Sbjct: 16  LLKGAGYTVLLSVGGMFFGLVLGFALALMRLSKVLPLNWLARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G+ LN 
Sbjct: 76  YFGMPQIGIELDPIPASLIGLSLNM 100


>gi|297565167|ref|YP_003684139.1| polar amino acid ABC transporter inner membrane subunit
           [Meiothermus silvanus DSM 9946]
 gi|296849616|gb|ADH62631.1| polar amino acid ABC transporter, inner membrane subunit
           [Meiothermus silvanus DSM 9946]
          Length = 216

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F         +I   S + G+ L      L+R    +    L L YI   L+ G P L
Sbjct: 10  LPFLLQGAWVTLRITALSLIFGVFLGTLV-ALARMSPIRWLSGLTLGYIE--LLRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I L +   F  P L Q           EF++  IA S  ++A++AEI+R+G+ ++P+G
Sbjct: 67  VQIFLIF---FGIPQLTQ-------QQINEFVAGVIAFSINSSAYVAEILRAGIQSIPKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA++LG +  +  R ++LPQA   +IPPL ++ + LLKNSSL  A+   +L   G  
Sbjct: 117 QREAALSLGFSPTQTLRYIILPQAFIRVIPPLVNEGIALLKNSSLLSAIAVVELTRAGQL 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I  +T +  E+ L    IYL ++++++    +L A+  ++
Sbjct: 177 ISARTFKPFEMYLAVSLIYLVMTVILSFVARQLEARWQVR 216



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 35/76 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I    +GTLV   R+S  + ++ +   Y+E+ R  P LV IF +
Sbjct: 13  LLQGAWVTLRITALSLIFGVFLGTLVALARMSPIRWLSGLTLGYIELLRGTPLLVQIFLI 72

Query: 149 YKSVLSVLPIPDHSIV 164
           +  +  +     +  V
Sbjct: 73  FFGIPQLTQQQINEFV 88


>gi|307711328|ref|ZP_07647748.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
 gi|307616844|gb|EFN96024.1| bacterial extracellular solute-binding protein, family 3
           [Streptococcus mitis SK321]
          Length = 521

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 229 IFGLPTLVLIAL--KYQLHFDKPVLGQFNFIGGSTVS------PEFMSLYIALSCYTAAF 280
           I+GL  LV   L    ++    P++ Q   I   T           ++    +S  T A+
Sbjct: 332 IYGLQKLVGWILNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFVERRM 503



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|104779493|ref|YP_605991.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95108480|emb|CAK13174.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 222

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 18/235 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L   +      L     T+  +     F  VLG  L+L      R         L  +Y
Sbjct: 5   SLQLVVDSVPFLLKGAGYTVLLSVGGMFFGLVLGFALALM-----RLSKILPLDWLARIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +S F   G P LV + + Y           F             +  I LS   AA+I E
Sbjct: 60  VSFF--RGTPLLVQLFVIY-----------FGLPQIGIELDPIPASLIGLSLNMAAYICE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+ + ++ RGQ EAA ++G+T  +A R  +LPQA+R+ +PPL + +++L+K+++LA  
Sbjct: 107 ILRAAISSIDRGQWEAAASIGMTRTQAMRRAILPQALRTALPPLGNSFISLVKDTALAAT 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +L      I  +T +   + L    +Y  L  ++A F NR+ A++   +++
Sbjct: 167 IQVPELFRQAQLITARTFEVFTMYLAVAVVYWILCSILAHFQNRMEARVNQHDQE 221



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RLS    + W+ R+YV  FR  P LV +F +
Sbjct: 16  LLKGAGYTVLLSVGGMFFGLVLGFALALMRLSKILPLDWLARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G+ LN 
Sbjct: 76  YFGLPQIGIELDPIPASLIGLSLNM 100


>gi|15674455|ref|NP_268629.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes M1 GAS]
 gi|13621552|gb|AAK33350.1| putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes M1 GAS]
          Length = 522

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ +AA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFKAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 459 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRYIERRF 502



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|91224517|ref|ZP_01259779.1| hypothetical amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 12G01]
 gi|269968272|ref|ZP_06182298.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91190859|gb|EAS77126.1| hypothetical amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 12G01]
 gi|269827129|gb|EEZ81437.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 315

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 19/227 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           + +   L     T+  +    + +  LG+V+ L      R       K L L+Y+   +I
Sbjct: 108 WRSGPILDGVVTTIKISLWSLIIALALGLVVGLM-----RISSNPALKKLALVYVE--VI 160

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV I + Y             FIG       F +  IALS +TAA++AEIVRSG+
Sbjct: 161 RGTPLLVQIFIVY------------FFIGTVLDLERFTAGVIALSVFTAAYVAEIVRSGI 208

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++PRGQMEAA +LG+ + KA   V+LPQA +  +PPL  Q++NL+K+SSL   +   DL
Sbjct: 209 QSIPRGQMEAARSLGMNYPKAMIYVILPQAFKQTLPPLAGQFINLIKDSSLVSVISITDL 268

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G  +++ +    E+      +YL L+  ++  +  L  K+A  +
Sbjct: 269 TKAGREVVSGSFAPFEVWFTVAALYLLLTSTLSWAIQTLEKKLAASD 315



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G V T  ++   +I A  +G +VG  R+S+N  +  +  VYVEV R  P LV IF +
Sbjct: 113 ILDGVVTTIKISLWSLIIALALGLVVGLMRISSNPALKKLALVYVEVIRGTPLLVQIFIV 172

Query: 149 YKSV 152
           Y  +
Sbjct: 173 YFFI 176


>gi|226361360|ref|YP_002779138.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226239845|dbj|BAH50193.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 330

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +    V+  L + V  +   P          F     L    +T+       V  F 
Sbjct: 38  WRWVVSAAVLVLLAQFVHGLATNPGWDWATFAKYFTAGSVLQALWMTVKLTLWGTVLGFA 97

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDK 248
           LG+VL++     SR  H    + +  +YI  F    +P +V +   +        L    
Sbjct: 98  LGVVLAV-----SRLSHNPVLQVIAWVYIWAF--RSIPLIVQLLFWFNITYLYQTLSLGI 150

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F     + V   F +  I L+ + AA+ AEI+RSG+I+V  GQ+EAA +LG+  R
Sbjct: 151 PFGPAFFTFEVNGVISGFTAAVIGLALHQAAYSAEIIRSGIISVDHGQIEAAQSLGIPRR 210

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQAMR I+P   ++ ++L K +S+   +  A+L      I  + G+ + +++
Sbjct: 211 RQFFKIVLPQAMRGILPNAANEVISLFKGTSIVSTMAIAELFYQVQVIFGRNGRVVPLLM 270

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+ ++++    +    A    +
Sbjct: 271 VATIWYIILTTLLSIGQYYVERHYARGSAR 300



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L     T  L   G +    +G ++   RLS N ++  I  VY+  FR+IP +V + F +
Sbjct: 78  LQALWMTVKLTLWGTVLGFALGVVLAVSRLSHNPVLQVIAWVYIWAFRSIPLIVQLLFWF 137

Query: 150 KSVLSVL 156
                  
Sbjct: 138 NITYLYQ 144


>gi|26986969|ref|NP_742394.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148545497|ref|YP_001265599.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24981583|gb|AAN65858.1|AE016214_3 cysteine ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
 gi|148509555|gb|ABQ76415.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|313496589|gb|ADR57955.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 222

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 18/235 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L   +      L     T+  +     F  VLG  L+L      R         L  +Y
Sbjct: 5   SLQLVVDSAPFLLKGAGYTVLLSVGGMFFGLVLGFALALM-----RLSKILPLNWLARVY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +S F   G P LV + + Y           F             +  I LS   AA+I E
Sbjct: 60  VSFF--RGTPLLVQLFVIY-----------FGMPQIGIELDPIPASLIGLSLNMAAYICE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+ + ++ RGQ EAA ++G+T  +A R  +LPQA+R+ +PPL + +++L+K+++LA  
Sbjct: 107 ILRAAISSIDRGQWEAAASIGMTRVQAMRRAILPQALRTALPPLGNSFISLVKDTALAAT 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +L      I  +T +   + +    IY  L  ++A F NR+ A++   +++
Sbjct: 167 IQVPELFRQAQLITARTFEVFTMYVAVAVIYWVLCSILAHFQNRMEARVNQHDQE 221



 Score = 54.6 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RLS    + W+ RVYV  FR  P LV +F +
Sbjct: 16  LLKGAGYTVLLSVGGMFFGLVLGFALALMRLSKILPLNWLARVYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G+ LN 
Sbjct: 76  YFGMPQIGIELDPIPASLIGLSLNM 100


>gi|255023362|ref|ZP_05295348.1| glutamine ABC transporter, permease/substrate-binding protein
           [Listeria monocytogenes FSL J1-208]
          Length = 255

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   LT+       + +F++GI          +  + K  + +  +Y+  F   G
Sbjct: 49  WPALLSGLWLTIRLAVVSLIIAFIIGITFGFM-----KVSNSKILRGIATVYVDIF--RG 101

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V     +  +F  P    F         P F++  IALS    A++ EIVR G+ +
Sbjct: 102 TPLIVQ---AFFFYFGIPAALDF-------RMPVFLAGVIALSLNAGAYMVEIVRGGIQS 151

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL H+KA   V+LPQA+R +IP   +Q++  LK++S+  A+G  +L  
Sbjct: 152 VDKGQMEAARSLGLPHKKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQ 211

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I+ +T ++    LI   +YL +  ++    +RL  ++ 
Sbjct: 212 SGKIIMARTFESTWTWLIIGIMYLIVITILTKISDRLERRLR 253



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  LA   +I A IIG   G  ++S +K++  I  VYV++FR  P +V  
Sbjct: 49  WPALLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQA 108

Query: 146 FFLYKSVLSV 155
           FF Y  + + 
Sbjct: 109 FFFYFGIPAA 118


>gi|16125689|ref|NP_420253.1| cystine ABC transporter permease [Caulobacter crescentus CB15]
 gi|221234444|ref|YP_002516880.1| cystine transport system permease protein [Caulobacter crescentus
           NA1000]
 gi|13422805|gb|AAK23421.1| cystine ABC tranporter, permease protein, putative [Caulobacter
           crescentus CB15]
 gi|220963616|gb|ACL94972.1| cystine transport system permease protein [Caulobacter crescentus
           NA1000]
          Length = 219

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V    +G+VL      L R       +    +Y+S F   G P LV + L Y    
Sbjct: 23  IVLSVIGMSIGVVLGFLL-ALMRLSRSALLRWPAGVYVSAF--RGTPLLVQLFLIYY--- 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L QF         P  ++  I  S   AA+  EI+RS + AV +GQ EAA  LG++
Sbjct: 77  ---GLPQFGL-----EMPPLVAAGIGFSLNVAAYSCEILRSAIAAVDKGQWEAASVLGMS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQA R+ + PL++ +++L+K++SLA  +   +L      I  +T +   +
Sbjct: 129 RGQTLRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITARTYEIFTL 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L    IY  LS ++A    RL  + A   +
Sbjct: 189 YLAAAAIYWILSTILAAAQTRLERRAAEGRR 219



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G L+   RLS + L+ W   VYV  FR  P LV +F +
Sbjct: 15  LLKGAGYTIVLSVIGMSIGVVLGFLLALMRLSRSALLRWPAGVYVSAFRGTPLLVQLFLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +          +    G  LN
Sbjct: 75  YYGLPQFGLEMPPLVAAGIGFSLN 98


>gi|322377150|ref|ZP_08051642.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M334]
 gi|321281863|gb|EFX58871.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus sp. M334]
          Length = 521

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 229 IFGLPTLVLIAL--KYQLHFDKPVLGQFNFIGGSTVS------PEFMSLYIALSCYTAAF 280
           I+GL  LV   L    ++    P++ Q   I   T           ++    +S  T A+
Sbjct: 332 IYGLQKLVGWILNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIIGTITGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|270261784|ref|ZP_06190057.1| transporter [Serratia odorifera 4Rx13]
 gi|270045268|gb|EFA18359.1| transporter [Serratia odorifera 4Rx13]
          Length = 305

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 14/268 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    L+V+  +     S+L  P     +    F     ++   +T+       +F F  
Sbjct: 22  RWFSALIVLLIVGIIANSMLHNPRFEWAVVAENFTEASIINGVIMTLKLTVISVIFGFAG 81

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L      R        A+   Y   F    +P LV + L Y +    P +  +  
Sbjct: 82  GVLLALM-----RLSANPVLVAVSWFYTWFF--RAVPMLVQLFLWYNIAALYPRISLWIP 134

Query: 257 IGG-------STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             G       +T+   F +  IAL  + +A+ AEIVR+G+ +V  GQ+EAA ALG    +
Sbjct: 135 FLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRAGIQSVGSGQLEAAKALGYRRGQ 194

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T + I ++L+
Sbjct: 195 ILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQIIYQRTYEVIPLLLV 254

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
               YL ++ ++++  + +        +
Sbjct: 255 ATLWYLVMTSILSIGQHYIERYFGRGTQ 282



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 38/113 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T  L    +I     G L+   RLSAN ++  +   Y   FR +P LV +F  
Sbjct: 60  IINGVIMTLKLTVISVIFGFAGGVLLALMRLSANPVLVAVSWFYTWFFRAVPMLVQLFLW 119

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y        I      L          +            +   ++   IV +
Sbjct: 120 YNIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRA 172


>gi|225856181|ref|YP_002737692.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
 gi|225725803|gb|ACO21655.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae P1031]
          Length = 521

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 8/173 (4%)

Query: 228 LIFGLPTLVLIAL--KYQLHFDKPVLGQFNFIGGSTVS------PEFMSLYIALSCYTAA 279
           +I+GL  LV   L    ++    P++ Q   I   T           ++    +S  T A
Sbjct: 331 VIYGLQKLVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGA 390

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S
Sbjct: 391 YMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTS 450

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 451 VLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWVLNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|329766800|ref|ZP_08258330.1| hypothetical protein HMPREF0428_00027 [Gemella haemolysans M341]
 gi|328839311|gb|EGF88893.1| hypothetical protein HMPREF0428_00027 [Gemella haemolysans M341]
          Length = 213

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                       T  KI + + ++G++L +    L++    K    +  +Y+   +I   
Sbjct: 6   PNYYITYLEATVTTLKISLIALLVGLILGIVIC-LAKISTFKVLNIIAAIYVE--VIRNT 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y           F           FMS  IALS  + A+++EI RSG++A+
Sbjct: 63  PILVQIMIIY-----------FALPEIGISFTPFMSAIIALSINSGAYVSEIFRSGILAI 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEA  +LGL++ +  +L++LPQA+++ +P L +++++L+K SS+   VG AD++  
Sbjct: 112 DKGQMEAGRSLGLSYFQTMKLIILPQALKNSLPALGNEFISLVKESSIVYFVGVADIMFT 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             T+ N T Q     L+   IY  ++ +++L + RL  K+
Sbjct: 172 ANTVKNATYQTFGPYLVAAAIYFIITSILSLLVKRLEKKL 211



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 44/110 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    +Y    L   V T  ++   ++   I+G ++   ++S  K++  I  +YVEV RN
Sbjct: 2   FDFLPNYYITYLEATVTTLKISLIALLVGLILGIVICLAKISTFKVLNIIAAIYVEVIRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P LV I  +Y ++  +       +     + +N+             A 
Sbjct: 62  TPILVQIMIIYFALPEIGISFTPFMSAIIALSINSGAYVSEIFRSGILAI 111


>gi|157370602|ref|YP_001478591.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322366|gb|ABV41463.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 305

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 14/268 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    L+V+  +     S+L  P     +    F     ++   +T+       +F F  
Sbjct: 22  RWFSALLVLLIVGIIAHSMLHNPRFEWAVVAENFTEESIINGVIMTLKLTVISVIFGFAG 81

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L      R        A+   Y   F    +P LV + L Y +    P +  +  
Sbjct: 82  GVLLALM-----RLSANPVLVAVSWFYTWFF--RAVPMLVQLFLWYNIAALYPRISLWIP 134

Query: 257 IGG-------STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
             G       +T+   F +  IAL  + +A+ AEIVR+G+ +V  GQ+EAA ALG    +
Sbjct: 135 FLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRAGIQSVGSGQLEAAKALGYRRGQ 194

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V+LPQAMR+I+PP  ++ +  LK +++   +   D++     I  +T + I ++L+
Sbjct: 195 ILWRVVLPQAMRTILPPAGNEVIGQLKTTAVVSVIALQDVLYSAQIIYQRTYEVIPLLLV 254

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
               YL ++ ++++  + +        +
Sbjct: 255 ATLWYLVMTSILSIGQHYVERYFGRGSQ 282



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 38/113 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T  L    +I     G L+   RLSAN ++  +   Y   FR +P LV +F  
Sbjct: 60  IINGVIMTLKLTVISVIFGFAGGVLLALMRLSANPVLVAVSWFYTWFFRAVPMLVQLFLW 119

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y        I      L          +            +   ++   IV +
Sbjct: 120 YNIAALYPRISLWIPFLGEVASAPTNTIISTFSAAVIALVMHQSAYAAEIVRA 172


>gi|307326880|ref|ZP_07606071.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306887416|gb|EFN18411.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 302

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 14/259 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V+     +V ++   P          F   R L    +++   A     S   G +++L
Sbjct: 32  IVLVLAAMAVTTIFTNPRFEWNTVAKYFFEIRVLKGIGVSIGMTAVTMAISLASGTLVAL 91

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKPVLGQFN 255
                SR         +       ++   +P LV +   Y L           P   +F 
Sbjct: 92  MRMGDSRLMSTVAAAFI-------WVFRSIPMLVQLLFWYNLAALFPTLSLGIPWGPRFV 144

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               + V     +  I L+ +  A+IAE++RSGL+AVP GQ +AA ALGLT  +    + 
Sbjct: 145 TFDSNDVIGPLTAAIIGLTLHETAYIAELIRSGLLAVPDGQHQAASALGLTPAQIFFRIT 204

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R I+PP+ ++ ++LLK +SL   +  ADL+     I  +  Q + ++++    Y+
Sbjct: 205 LPQALRVIVPPMGNELISLLKATSLVSVITLADLLYSVQLIYAKNFQTVPLLIVAAIWYM 264

Query: 376 SLSIMIALFMNRLNAKIAL 394
            ++ +I L   RL  ++  
Sbjct: 265 IITGVITLLQQRLERRLGR 283



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 7/107 (6%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  +    M  +   GTLV   R+  ++L++ +   ++ VFR+IP LV + F Y
Sbjct: 65  LKGIGVSIGMTAVTMAISLASGTLVALMRMGDSRLMSTVAAAFIWVFRSIPMLVQLLFWY 124

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                          L  G+    R ++F +  +       +    L
Sbjct: 125 NLAALFP-------TLSLGIPWGPRFVTFDSNDVIGPLTAAIIGLTL 164


>gi|94991751|ref|YP_599850.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS2096]
 gi|94545259|gb|ABF35306.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS2096]
          Length = 387

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 154 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 213

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 214 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 263

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 264 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 323

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G T+  QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 324 LYFSGNTVATQTYQYFQTFTIIAIIYFVLTFTVTRILRHIERRF 367



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 154 WKQFLRGTGMTLLISMVGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 213

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 214 FRGTPMIVQSMVIYYGTAQAF 234


>gi|296110461|ref|YP_003620842.1| amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU
           11154]
 gi|295831992|gb|ADG39873.1| amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opinefamily [Leuconostoc kimchii IMSNU
           11154]
          Length = 491

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 13/192 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L +       KA+  +Y+    I G P LV   + +           F           
Sbjct: 313 ALFKLSPNFILKAVGNIYVE--YIRGTPLLVQAFMVF-----------FGTQVIGLNLSA 359

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +A+   +AA++AEI+RSG+ +V  GQ EAA +LGL+  KA R ++LPQA+++I+P
Sbjct: 360 FAAGALAMGLNSAAYVAEIIRSGINSVNYGQTEAARSLGLSKGKAMRYIILPQAVKNILP 419

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++++ ++K  S+   +G  +L+   G +   + +    +LI  FIY  L+  I+  +
Sbjct: 420 ALGNEFVTIIKEGSVVSVIGVGELMFQTGVVQGASFKPFFPLLITSFIYFVLTFGISRAL 479

Query: 386 NRLNAKIALKEK 397
                ++A   +
Sbjct: 480 GYAEKRMARTSR 491



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA   ++   ++GTL+   +LS N ++  +  +YVE  R  P LV 
Sbjct: 283 YGNLFIKGTLITLALAAIAVVVGVVLGTLLALFKLSPNFILKAVGNIYVEYIRGTPLLVQ 342

Query: 145 IFFLYKSV 152
            F ++   
Sbjct: 343 AFMVFFGT 350


>gi|261417154|ref|YP_003250837.1| polar amino acid ABC transporter, inner membrane subunit
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261373610|gb|ACX76355.1| polar amino acid ABC transporter, inner membrane subunit
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|302325679|gb|ADL24880.1| putative amino acid ABC transporter, permease/amino acid-binding
           protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 498

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 115/262 (43%), Gaps = 16/262 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  +    +       +   +      +  F+ +    F    +     I  F+ +LGI
Sbjct: 250 TPYTLSKVVVIVRGDQAVESEESFGDHVYKNFVKDSRWKFIVEGLRNTLVISFFAALLGI 309

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           ++     ++ R  +E  G+   L +       +I G P ++ + + Y + F         
Sbjct: 310 MIGFVIAQI-RTSNEFNGRFKVLNWFAKAYLAVIRGTPMMIQLLIIYYIVFS-------- 360

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               S    + +   +A    + A+++EI+RSG+  V  GQ+EA  +LGL  R     ++
Sbjct: 361 ----SVNINKILVAIVAFGINSGAYVSEIIRSGIKGVDPGQIEAGRSLGLKFRTVLYYIV 416

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQA ++ +P LT+++++L+K +S+   +G  DL   G  I + T +A+  +L    IY 
Sbjct: 417 YPQAFKNSLPALTNEFISLIKETSICGYIGLTDLTRGGDIIRSMTYEAMLPLLAVAAIYF 476

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            +   ++  + +L  ++   E+
Sbjct: 477 IIVAGLSACVAKLEKRLKKNER 498



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 5/79 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAWICRVYVEVF 136
             S    I+ G  NT  ++F   +   +IG ++   R S       K++ W  + Y+ V 
Sbjct: 283 KDSRWKFIVEGLRNTLVISFFAALLGIMIGFVIAQIRTSNEFNGRFKVLNWFAKAYLAVI 342

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V S 
Sbjct: 343 RGTPMMIQLLIIYYIVFSS 361


>gi|271966876|ref|YP_003341072.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
 gi|270510051|gb|ACZ88329.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptosporangium roseum DSM 43021]
          Length = 304

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 11/221 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V S V+G+ L + A  + +       +    LY   F   G P LV +   + 
Sbjct: 68  WVTIQLTVLSMVIGLALGILA-AVMQLSGSPVLRGASALYTWFF--RGTPLLVQLIFWFN 124

Query: 244 LHFDKPVLGQFNFIGGSTVS--------PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +    P  G      G  +           F +  + L+    A++AEIVR+G+ +V  G
Sbjct: 125 IGLVFPSFGIGVPFDGPKLIEWQANELITPFTAALLGLAINEGAYMAEIVRAGIRSVDPG 184

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG++HR+  R V+LPQAMR IIPP  +Q++++LK +S+   +  A+L++V   
Sbjct: 185 QREAAEALGMSHRQVLRRVVLPQAMRVIIPPTGNQFISMLKTTSMVSVIAGAELLTVSQR 244

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I     + I ++++    Y+ L+ + ++  + +  +     
Sbjct: 245 IYLGNFEVIAMLIVASIWYIVLTTIASVGQHFIEKRFERGH 285



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+    +G L    +LS + ++     +Y   FR  P LV + F +
Sbjct: 64  LGGLWVTIQLTVLSMVIGLALGILAAVMQLSGSPVLRGASALYTWFFRGTPLLVQLIFWF 123

Query: 150 KSVL 153
              L
Sbjct: 124 NIGL 127


>gi|327400780|ref|YP_004341619.1| polar amino acid ABC transporter inner membrane subunit
           [Archaeoglobus veneficus SNP6]
 gi|327316288|gb|AEA46904.1| polar amino acid ABC transporter, inner membrane subunit
           [Archaeoglobus veneficus SNP6]
          Length = 224

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 14/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           K+   S +LG++       L R         L   Y+    I G P L
Sbjct: 16  LPNLAYGAFVTVKLTSISTLLGLIFGTILG-LGRISKNPLIFGLSTSYVEF--IRGTPLL 72

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y                     P   +  +AL+  + A+IAEI+R+G+ +VP+G
Sbjct: 73  VQIMIVYY-----------GLPAVGINLPPEPAGILALTLNSGAYIAEIIRAGIQSVPKG 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LG+++ +A R V+ PQA R+I+P L ++++ LLK+SSL   +  A+L  VG  
Sbjct: 122 QMEAARSLGMSYFQAMRYVVFPQAFRNILPALGNEFIALLKDSSLLSVIAIAELTRVGKQ 181

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I + T  A   +L     YL +++ ++  +N    ++   E
Sbjct: 182 IYSTTFNAWTPLLGVALFYLMMTLPLSRLVNYAQKRLGGHE 222



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 35/84 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L     +   I GT++G GR+S N L+  +   YVE  R  P LV I  +
Sbjct: 19  LAYGAFVTVKLTSISTLLGLIFGTILGLGRISKNPLIFGLSTSYVEFIRGTPLLVQIMIV 78

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  + +V             + LN
Sbjct: 79  YYGLPAVGINLPPEPAGILALTLN 102


>gi|15900370|ref|NP_344974.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116516213|ref|YP_815922.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|149023738|ref|ZP_01836218.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
 gi|14971923|gb|AAK74614.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae TIGR4]
 gi|116076789|gb|ABJ54509.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae D39]
 gi|147929675|gb|EDK80667.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP23-BS72]
          Length = 521

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 8/173 (4%)

Query: 228 LIFGLPTLVLIAL--KYQLHFDKPVLGQFNFIGGSTVS------PEFMSLYIALSCYTAA 279
           +I+GL  LV   L    ++    P++ Q   I   T           ++    +S  T A
Sbjct: 331 VIYGLQKLVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGA 390

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S
Sbjct: 391 YMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTS 450

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 451 VLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKVIYGLQKLVGWVLNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|319944973|ref|ZP_08019235.1| amino acid ABC superfamily ATP binding cassette transporter
           transmembrane protein [Lautropia mirabilis ATCC 51599]
 gi|319741543|gb|EFV93968.1| amino acid ABC superfamily ATP binding cassette transporter
           transmembrane protein [Lautropia mirabilis ATCC 51599]
          Length = 262

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 12/212 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S V G+VL +    L R       + +   YI  ++I G P LV +   +    
Sbjct: 62  VYLTLVSGVAGLVLGVLG-ALGRLSRIPPIRWIASFYI--WVIRGTPLLVQVLFVF---L 115

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L  +  +       +F S  +AL+    A+ AE +R+GL+AVPRGQ EAA +LGL+
Sbjct: 116 ALPELLPWLKL------DDFTSACVALAFNAGAYNAESIRAGLLAVPRGQTEAARSLGLS 169

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +      V+ PQA +  +PPL + ++ LLK+SSLA A+G  +L +V   I + T Q I  
Sbjct: 170 NWHTFWDVIFPQAFKIALPPLVNNFIALLKDSSLAYAIGVVELTNVANRIQSSTFQPIPP 229

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++    IYL L+ ++      +  ++ ++ ++
Sbjct: 230 LVTAAVIYLLLTTVLTQISTAVEHRMDVEGRQ 261



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T +L     +   ++G L   GRLS    + WI   Y+ V R  P LV + F+
Sbjct: 54  FAEGSRITVYLTLVSGVAGLVLGVLGALGRLSRIPPIRWIASFYIWVIRGTPLLVQVLFV 113

Query: 149 YKSVLSVLPI 158
           + ++  +LP 
Sbjct: 114 FLALPELLPW 123


>gi|227891736|ref|ZP_04009541.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
 gi|227866461|gb|EEJ73882.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
          Length = 485

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 17/221 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   L+    T+       + + + GI++             K  + +    I  F   G
Sbjct: 280 SGVFLNGLWKTIYLTILGIIGATIFGIIIGFLG-----VIPNKFAQGVSTTVIYIF--RG 332

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         T  P F++  I L+    A+ A  V+ G+ A
Sbjct: 333 LPLLVLALFIYN---GIPSLTG-------TKIPAFIAGIITLTLNEGAYTAAFVKGGIEA 382

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGL+  KA + ++LPQ ++ ++P   +Q++  LK++S+   +G  +L  
Sbjct: 383 VDKGQMEAARSLGLSFGKAMKKIILPQGIKIMVPSFVNQFIITLKDTSILSIIGILELTQ 442

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  +  ++  I   +YL +  ++    N L  K+
Sbjct: 443 TGKIIIARNLEGFKVWAIIGLMYLIVITVLTWISNYLQKKM 483



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T +L   G+I ATI G ++G   +  NK    +    + +FR +P LV+  F
Sbjct: 282 VFLNGLWKTIYLTILGIIGATIFGIIIGFLGVIPNKFAQGVSTTVIYIFRGLPLLVLALF 341

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 342 IYNGIPSL 349


>gi|258654440|ref|YP_003203596.1| polar amino acid ABC transporter inner membrane subunit
           [Nakamurella multipartita DSM 44233]
 gi|258557665|gb|ACV80607.1| polar amino acid ABC transporter, inner membrane subunit
           [Nakamurella multipartita DSM 44233]
          Length = 307

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 14/267 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +  +V++      V S+L  P       +    + + L    LT+       V   V
Sbjct: 27  WRWVSAVVLLVLAAMLVNSLLTNPAWDWPTVWQYLFSPQVLRGLWLTVWVTVAAMVIGIV 86

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDK 248
           LG++L++      R         +  +YI  F   G P LV I            +    
Sbjct: 87  LGVILAVM-----RLSPNPIVNGVAWIYIWFF--RGTPVLVQIIFWVFLGQLYKYISLGI 139

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P   QF +   + + P  +   +AL    AA++AEIVR+G+ +V  GQ EAA ALG+T  
Sbjct: 140 PFGPQFLYFNTTELIPVLVGGLLALGLNEAAYMAEIVRAGISSVDSGQTEAAEALGMTRL 199

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           K  R ++LPQAMR I+PP  ++ +++LK +SL       +L      I     + I +++
Sbjct: 200 KVMRRIVLPQAMRIIVPPTGNETISMLKTTSLLSVAAILELFGTVQLIYGSNYKQIPLLV 259

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
           +    YL  + ++++    L  +    
Sbjct: 260 VASIWYLVFTSVMSVGQYFLEKRFGRG 286



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T W+  + M+   ++G ++   RLS N +V  +  +Y+  FR  P LV I F  
Sbjct: 67  LRGLWLTVWVTVAAMVIGIVLGVILAVMRLSPNPIVNGVAWIYIWFFRGTPVLVQIIFWV 126

Query: 150 K 150
            
Sbjct: 127 F 127


>gi|225858303|ref|YP_002739813.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
 gi|225720142|gb|ACO15996.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 70585]
          Length = 521

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 VLNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|170288144|ref|YP_001738382.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga sp. RQ2]
 gi|281411812|ref|YP_003345891.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga naphthophila RKU-10]
 gi|170175647|gb|ACB08699.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga sp. RQ2]
 gi|281372915|gb|ADA66477.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga naphthophila RKU-10]
          Length = 216

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 113/230 (49%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +P  + +    L        +  ++   + ++G+ + +F   + R    +  +    +Y+
Sbjct: 1   MPEWLSVIVDNLPLLLKGALSTLQLTSLAVLIGLAIGIFVG-MGRLSKYRIIRYPSSVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P +V + L Y           F           F +  IAL   + A++AEI
Sbjct: 60  EF--LRGTPLMVQLFLVY-----------FGLPELGLEFDRFTAAVIALGINSGAYVAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ +VP+GQ EAA +LG++H +A   V+LPQA R I+P L ++++ L K+SSLA+ +
Sbjct: 107 VRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALAKDSSLAMVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L+     I+++T  +  I      IY +++  ++  +  +  ++ +
Sbjct: 167 GTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLKV 216



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G ++T  L    ++    IG  VG GRLS  +++ +   VYVE  R  P +V +F +
Sbjct: 15  LLKGALSTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFLRGTPLMVQLFLV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +    D        + +N
Sbjct: 75  YFGLPELGLEFDRFTAAVIALGIN 98


>gi|224372627|ref|YP_002606999.1| permease of abc transporter [Nautilia profundicola AmH]
 gi|223589720|gb|ACM93456.1| permease of abc transporter [Nautilia profundicola AmH]
          Length = 318

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 12/172 (6%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   +I G P LV + + Y +            +      P F +  ++LS +  A+IAE
Sbjct: 156 VYVTVIRGTPLLVQLFIFYFI------------VATIFNLPRFWAGVMSLSIFYGAYIAE 203

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R  + A+ +GQ EAA++LG T  +  +L++LPQA+R  +P L  + ++L+K+SSL   
Sbjct: 204 ILRGAIQAIDKGQHEAAMSLGFTSFQKMQLIILPQALRKALPALVGELISLIKDSSLVSI 263

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   DL  VG  I+  T    E  L    +YL L+ +++   +RL  K+  K
Sbjct: 264 ISITDLTKVGREIVANTFSPFETWLTVAALYLMLTSILSFIGHRLEKKMKAK 315



 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            ++G   T  ++   MI A IIG ++   RLS    + +I  VYV V R  P LV +F  
Sbjct: 114 FIMGIWVTIKISIISMIIAFIIGLIIAIMRLSGIPALDYIGSVYVTVIRGTPLLVQLFIF 173

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  V ++  +P     +          +
Sbjct: 174 YFIVATIFNLPRFWAGVMSLSIFYGAYI 201


>gi|148988205|ref|ZP_01819668.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|148993994|ref|ZP_01823364.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|148996854|ref|ZP_01824572.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|149006411|ref|ZP_01830123.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|168482691|ref|ZP_02707643.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|168488141|ref|ZP_02712340.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|168492631|ref|ZP_02716774.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|168576830|ref|ZP_02722680.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|169834409|ref|YP_001693956.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|182683418|ref|YP_001835165.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|221231314|ref|YP_002510466.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae ATCC 700669]
 gi|225854025|ref|YP_002735537.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|303255927|ref|ZP_07341957.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|303259526|ref|ZP_07345503.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|303262389|ref|ZP_07348332.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|303264806|ref|ZP_07350723.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|303267362|ref|ZP_07353220.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|303269680|ref|ZP_07355436.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|307067096|ref|YP_003876062.1| amino acid ABC transporter/signal transduction system periplasmic
           domain-containing protein [Streptococcus pneumoniae
           AP200]
 gi|307126668|ref|YP_003878699.1| amino acid ABC transporter amino acid-binding protein/permeae
           [Streptococcus pneumoniae 670-6B]
 gi|147757429|gb|EDK64468.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP11-BS70]
 gi|147762188|gb|EDK69150.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP18-BS74]
 gi|147926669|gb|EDK77742.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP6-BS73]
 gi|147927583|gb|EDK78610.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP9-BS68]
 gi|168996911|gb|ACA37523.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Hungary19A-6]
 gi|172043569|gb|EDT51615.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC1873-00]
 gi|182628752|gb|ACB89700.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CGSP14]
 gi|183573209|gb|EDT93737.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP195]
 gi|183576815|gb|EDT97343.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae CDC3059-06]
 gi|183577459|gb|EDT97987.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae MLV-016]
 gi|220673774|emb|CAR68274.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae ATCC 700669]
 gi|225724181|gb|ACO20034.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae JJA]
 gi|301801361|emb|CBW34046.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae INV200]
 gi|302597102|gb|EFL64218.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae BS455]
 gi|302636488|gb|EFL66980.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP14-BS292]
 gi|302639460|gb|EFL69918.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae SP-BS293]
 gi|302640777|gb|EFL71168.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS458]
 gi|302643095|gb|EFL73384.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS457]
 gi|302645673|gb|EFL75903.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae BS397]
 gi|306408633|gb|ADM84060.1| ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain protein [Streptococcus
           pneumoniae AP200]
 gi|306483730|gb|ADM90599.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae 670-6B]
 gi|332075296|gb|EGI85766.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332076898|gb|EGI87360.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 521

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 VLNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|237798050|ref|ZP_04586511.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020901|gb|EGI00958.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 222

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   +      L     T+  +     F  VLG  L+L      R    K    L  
Sbjct: 3   EESLQLALDSAPFLLKGAYYTVFLSLGGMFFGLVLGFGLALM-----RLSRFKPVNWLAR 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+S F   G P LV + L Y   +  P L                +  I  S   AA+ 
Sbjct: 58  IYVSFF--RGTPLLVQLFLIY---YGLPEL--------GIELDPLTAALIGFSLNMAAYA 104

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+RS + ++ RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + +++L+K+++LA
Sbjct: 105 CEILRSAIGSIERGQWEAAASIGMTRWQTLRRAILPQAARTALPPLGNSFISLVKDTALA 164

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   +L      I  +T +   + L    IY  L+  ++   NRL A++   +
Sbjct: 165 ATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSYLQNRLEARVNRHD 219



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  K V W+ R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFFGLVLGFGLALMRLSRFKPVNWLARIYVSFFRGTPLLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G  LN 
Sbjct: 76  YYGLPELGIELDPLTAALIGFSLNM 100


>gi|225860475|ref|YP_002741984.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229959|ref|ZP_06963640.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254588|ref|ZP_06978174.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|225727474|gb|ACO23325.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390862|gb|EGE89202.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 521

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 VLNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|15643358|ref|NP_228402.1| amino acid ABC transporter, permease protein [Thermotoga maritima
           MSB8]
 gi|4981111|gb|AAD35677.1|AE001734_4 amino acid ABC transporter, permease protein [Thermotoga maritima
           MSB8]
          Length = 216

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 112/230 (48%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +P  + +    L           ++   + ++G+ + +F   + R    +  +    +Y+
Sbjct: 1   MPEWLSVIVDNLPLLLKGALRTLQLTSLAVLIGLAIGIFVG-MGRLSKYRIIRYPSSVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P +V + L Y           F           F +  IAL   + A++AEI
Sbjct: 60  EF--LRGTPLMVQLFLVY-----------FGLPELGLEFDRFTAAVIALGINSGAYVAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ +VP+GQ EAA +LG++H +A   V+LPQA R I+P L ++++ L K+SSLA+ +
Sbjct: 107 VRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALAKDSSLAMVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L+     I+++T  +  I      IY +++  ++  +  +  ++ +
Sbjct: 167 GTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLKV 216



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++    IG  VG GRLS  +++ +   VYVE  R  P +V +F +
Sbjct: 15  LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSVYVEFLRGTPLMVQLFLV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +    D        + +N
Sbjct: 75  YFGLPELGLEFDRFTAAVIALGIN 98


>gi|289549953|ref|YP_003470857.1| amino acid ABC transporter, permease protein [Staphylococcus
           lugdunensis HKU09-01]
 gi|289179485|gb|ADC86730.1| amino acid ABC transporter, permease protein [Staphylococcus
           lugdunensis HKU09-01]
          Length = 239

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++L+LF T L R    +  +A+  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITIVTFVLGLILALF-TALMRISTSRILRAIARIYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+R
Sbjct: 91  GRLITGDADNQWTLAP-VIAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T +   I +
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYFTIYI 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      +KI    +
Sbjct: 210 LVAIMYWVVCFIISVLQGLYESKIERGYR 238



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 40/103 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   I+       R+S ++++  I R+YV + R  P +V +F ++  +  +
Sbjct: 31  SIPITIVTFVLGLILALFTALMRISTSRILRAIARIYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +        + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLITGDADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|326328668|ref|ZP_08195008.1| amino acid ABC transporter, permease protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325953629|gb|EGD45629.1| amino acid ABC transporter, permease protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 298

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 98/185 (52%), Gaps = 3/185 (1%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIAL 273
             +    LY+   L+ G+P LV +   + L +  P L   F     + +     +  I L
Sbjct: 102 PIRWTCQLYVG--LLRGVPPLVQLIFWFNLAYLVPRLSVGFASWSVNDLITPLTAAIIGL 159

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S + +A++AEI+R+G+++V  GQ +AA A+G + R+    V+LPQA+R I+PP  SQ++ 
Sbjct: 160 SLHESAYMAEIIRAGIMSVDSGQRDAARAMGYSGRQTFWKVVLPQALRVIVPPSGSQFIA 219

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK +SL   +   DL+     I  +T Q + ++L+ +  YL +  ++ L   R+  ++ 
Sbjct: 220 LLKGTSLVSVITLTDLLYSVQIIYGRTYQVVPLLLVAVIWYLIVVTLLTLVQRRIERRLG 279

Query: 394 LKEKK 398
               +
Sbjct: 280 RGYDR 284



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 34/68 (50%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G V T +L    M   T IGT   AG+LS    + W C++YV + R +PPLV + F +
Sbjct: 68  MSGLVMTLFLTVVCMALGTAIGTAAAAGQLSDFGPIRWTCQLYVGLLRGVPPLVQLIFWF 127

Query: 150 KSVLSVLP 157
                V  
Sbjct: 128 NLAYLVPR 135


>gi|303256728|ref|ZP_07342742.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Burkholderiales bacterium 1_1_47]
 gi|330999370|ref|ZP_08323087.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
 gi|302860219|gb|EFL83296.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Burkholderiales bacterium 1_1_47]
 gi|329575228|gb|EGG56779.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
          Length = 250

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 10/236 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-----TGKALPLLYIS 225
                L    +T+           +LG+ L +     +RH   K       +    +Y+S
Sbjct: 12  YWPLFLEGAKMTIQITVICVTLGVILGMALGMARLADARHSPWKQILKYCVRWPVTVYVS 71

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAF 280
            F    L   +L+     L F           G       +     ++  +A++    A+
Sbjct: 72  FFRGTPLFVQILLMQFAILPFFIHPTEGLLISGDLAREIRSTYGAMLAGIVAITLNAGAY 131

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E+ R+G+ ++ +GQMEAA ++G+T+ +A   ++LPQA R ++PPL +  + +LK+SSL
Sbjct: 132 LSEVFRAGIQSLDKGQMEAARSVGMTYWQAMFHIILPQAFRRMLPPLGNNAIAILKDSSL 191

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             A+G A+L     T+   T +  E  +    +Y  +++ +A  + ++  ++   +
Sbjct: 192 VSAIGLAELAYAARTVAGATARYWEPYITISLMYWVMTLGLAYLVKKMEQRLGKGD 247



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 10/101 (9%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWI 128
           Y   + Y    L G   T  +    +    I+G  +G  RL+  +           V W 
Sbjct: 6   YEVITEYWPLFLEGAKMTIQITVICVTLGVILGMALGMARLADARHSPWKQILKYCVRWP 65

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
             VYV  FR  P  V I  +  ++L     P   +++   +
Sbjct: 66  VTVYVSFFRGTPLFVQILLMQFAILPFFIHPTEGLLISGDL 106


>gi|317048144|ref|YP_004115792.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949761|gb|ADU69236.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 502

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 10/235 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +   ++    +          ++ V +++ GIVL L    L++       +     
Sbjct: 1   MQFDWPYLISLFHYADFWRASWLVVQLSVLTWLGGIVLGLGV-ALAKQSRNAVLRNAATC 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F    LP LVL+   + L    P            +S  F +  +AL     A+IA
Sbjct: 60  YIWLF--RSLPLLVLLIFIFNLPQIFPATSGM-------LSNPFAAGLLALIISETAYIA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL++V RGQ EA  ALGL   +    +++PQA+R  +P L ++++ ++K +SL  
Sbjct: 111 EIHRGGLLSVQRGQFEAGRALGLNTAQIRLSIIIPQALRISLPTLVNEFITIVKMTSLVS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  ++++ VG  +     + +E +L     Y+ +  +       L  +  ++ +
Sbjct: 171 VISLSEILMVGERLYTDNFKVMETLLAVACYYVLIVTLFERLFGWLERRWDVQNR 225



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 7/206 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PY     +             L+    +   ++G  V   + S N ++      Y+ +FR
Sbjct: 6   PYLISLFHYADFWRASWLVVQLSVLTWLGGIVLGLGVALAKQSRNAVLRNAATCYIWLFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---- 193
           ++P LV++ F++  +  + P     +  PF   L    +S      + +    +      
Sbjct: 66  SLPLLVLLIFIFN-LPQIFPATSGMLSNPFAAGLLALIISETAYIAEIHRGGLLSVQRGQ 124

Query: 194 FVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F  G  L L     RLS    +    +LP L      I  + +LV +    ++      L
Sbjct: 125 FEAGRALGLNTAQIRLSIIIPQALRISLPTLVNEFITIVKMTSLVSVISLSEILMVGERL 184

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYT 277
              NF    T+        + ++ + 
Sbjct: 185 YTDNFKVMETLLAVACYYVLIVTLFE 210


>gi|307710415|ref|ZP_07646854.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
 gi|307618827|gb|EFN97964.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis SK564]
          Length = 521

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 ILNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KL+ WI  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYSLQKLIGWILNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|224541592|ref|ZP_03682131.1| hypothetical protein CATMIT_00763 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525504|gb|EEF94609.1| hypothetical protein CATMIT_00763 [Catenibacterium mitsuokai DSM
           15897]
          Length = 232

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/225 (29%), Positives = 120/225 (53%), Gaps = 6/225 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F  +R      +T++ +    + + ++GI++ L  T  S+    K  KA+  LYI  ++I
Sbjct: 10  FFASRFNQAIVITIELSIISLIAATIIGIIVGLVNTLKSKSVIMKILKAIANLYI--YII 67

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV I + Y   F    + +        +   F +  +ALS    A++AEIVR G+
Sbjct: 68  RGTPMLVQILIIY---FGLGQMLRPTGFRWLNIGGTFTAGTVALSLNAGAYMAEIVRGGI 124

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV +GQ+EAA +LGLT+ K  + ++LPQA+R+++P + +Q++  +K++SL   +G  +L
Sbjct: 125 EAVDKGQIEAARSLGLTYGKTMKKIVLPQALRTMLPSIINQFIISIKDTSLLSVIGLTEL 184

Query: 350 VSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +VG TI   Q+   + I       YL +  ++A     +  +++
Sbjct: 185 TNVGKTIAATQSAHMMVIYCFMACYYLFICTVLAQVSKVVEKRLS 229



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFRNIPPLVVIFF 147
            V T  L+   +I ATIIG +VG      +K     ++  I  +Y+ + R  P LV I  
Sbjct: 19  IVITIELSIISLIAATIIGIIVGLVNTLKSKSVIMKILKAIANLYIYIIRGTPMLVQILI 78

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFL 171
           +Y  +  +L       +   G F 
Sbjct: 79  IYFGLGQMLRPTGFRWLNIGGTFT 102


>gi|223042510|ref|ZP_03612559.1| L-cystine transport system permease protein TcyB [Staphylococcus
           capitis SK14]
 gi|222444173|gb|EEE50269.1| L-cystine transport system permease protein TcyB [Staphylococcus
           capitis SK14]
          Length = 239

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 115/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG+V++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITIVTFILGLVIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ +R
Sbjct: 91  GRLITNDADNQWTLAP-VVAAIIGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L L+K++SL   +  A++      + + + + + I +
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTSYEYLTIYI 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      ++I    +
Sbjct: 210 LVAIMYWVVCFIISIIQGWYESRIERGYR 238



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 40/103 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   +I       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITIVTFILGLVIALFTALMRISTSKILRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +  +   A   +   ++ I
Sbjct: 91  GRLITNDADNQWTLAPVVAAIIGLSFNVGAYASEIIRGGIISI 133


>gi|54023858|ref|YP_118100.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
 gi|54015366|dbj|BAD56736.1| putative ABC transporter permease [Nocardia farcinica IFM 10152]
          Length = 308

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 15/270 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I   +++  L   V        +          + R LS   +T++        + VL
Sbjct: 26  RWIAAGIILVLLGLFVYGAATNEAYQWGTYGRYLFDTRILSGALVTLELTVLAMAIAIVL 85

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-------YQLHFDKP 249
           G VL++      R       ++    ++  ++  G P  V +           Q+    P
Sbjct: 86  GTVLAVM-----RLSPNPVLRSTA--WVYLWIFRGTPVFVQLVFWGLFPSLYRQIDLGVP 138

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              QF  +    +   F    I L    AA++AEIVR+G+ +V  GQ EA+IALG++  +
Sbjct: 139 FGPQFFHLDVQGLQAAFAFAVIGLGLNEAAYMAEIVRAGINSVGEGQREASIALGMSWAQ 198

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIIL 368
             R  +LPQAMR IIPP  ++ + +LK +SL  A+    DL      I     Q I ++L
Sbjct: 199 TMRRTVLPQAMRVIIPPTGNELIGMLKTTSLVTAIPLSTDLYGRARDIYGVNFQPIPLLL 258

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    YL+++ ++ +    L    +    +
Sbjct: 259 VTATWYLAITSVLMVGQYYLERHYSRGASR 288



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 84  SYATAI-----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +Y   +     L G + T  L    M  A ++GT++   RLS N ++     VY+ +FR 
Sbjct: 54  TYGRYLFDTRILSGALVTLELTVLAMAIAIVLGTVLAVMRLSPNPVLRSTAWVYLWIFRG 113

Query: 139 IPPLVVIFFLY 149
            P  V + F  
Sbjct: 114 TPVFVQLVFWG 124


>gi|315659420|ref|ZP_07912283.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus lugdunensis M23590]
 gi|315495539|gb|EFU83871.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus lugdunensis M23590]
          Length = 239

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++L+LF T L R    +  +A+  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITIVTFILGLILALF-TALMRISTSRILRAIARIYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+R
Sbjct: 91  GRLITGDADNQWTLAP-VIAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T +   I +
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYFTIYI 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      +KI    +
Sbjct: 210 LVAIMYWVVCFIISVLQGLYESKIERGYR 238



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 40/103 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   I+       R+S ++++  I R+YV + R  P +V +F ++  +  +
Sbjct: 31  SIPITIVTFILGLILALFTALMRISTSRILRAIARIYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +        + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLITGDADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|290956092|ref|YP_003487274.1| permease of ABC transporter [Streptomyces scabiei 87.22]
 gi|260645618|emb|CBG68709.1| putative permease component of ABC transporter [Streptomyces
           scabiei 87.22]
          Length = 291

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 4/247 (1%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +  + L   P P      PF               +     I V +  LG++  L    L
Sbjct: 1   MIDTSLLAGPAPVSGFDWPFFWHYLLSPSGIFLEGLWRTVYISVVAQTLGVLFGLVI-AL 59

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEF 266
           ++       +     Y+  +LI G P LV + L Y  L            +GG  +    
Sbjct: 60  AQRSRFAGLRWCGRTYV--WLIRGTPLLVQLVLVYNGLAAAGVYRFTDVQVGGLVLLGVV 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L+   AA++AEI+R+ L A+ RGQ EAA ALG+T     R+VLLPQA+R ++PP
Sbjct: 118 QAAVLTLAVNEAAYMAEIIRAALDAIDRGQTEAAQALGMTPSLTMRVVLLPQALRIVVPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +++  ++K++SL   +G  ++     +I + T +  EI L+    YL+L+ + +    
Sbjct: 178 LGNEFNLMMKSTSLLSVIGLQEMFLTAQSINSATFKTFEIFLVAACYYLALTTVWSFVQR 237

Query: 387 RLNAKIA 393
            +  ++A
Sbjct: 238 FIERRLA 244



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +++        + G ++   + S    + W  R YV + R  P LV +  +
Sbjct: 32  FLEGLWRTVYISVVAQTLGVLFGLVIALAQRSRFAGLRWCGRTYVWLIRGTPLLVQLVLV 91

Query: 149 YKSVLSV 155
           Y  + + 
Sbjct: 92  YNGLAAA 98


>gi|148379978|ref|YP_001254519.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933019|ref|YP_001384277.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153941251|ref|YP_001391341.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|168179724|ref|ZP_02614388.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|148289462|emb|CAL83559.1| probable amino acid ABC transporter, permease protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152929063|gb|ABS34563.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152937147|gb|ABS42645.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|182669187|gb|EDT81163.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|295319370|gb|ADF99747.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 228

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 116/232 (50%), Gaps = 5/232 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               FL+     F      T    F F+ V+G +L L  + +      K  K + + YI 
Sbjct: 1   MDFSFLSKYYSFFTNGAKYTIILAF-FTVVIGTILGLLLSLMK-LSKNKILKYIAVSYIE 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G P LV + + Y       +      I GS   P+F +  +ALS  + A++AEI+
Sbjct: 59  F--IRGTPVLVQLYIIYYGLPTIGIKFPEVPILGSNF-PDFFAGILALSINSGAYVAEII 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++ ++K SS+   +G
Sbjct: 116 RAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIKESSIVSIIG 175

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L+    T+     +  E +L+   +Y  L+  ++  +     ++ + ++
Sbjct: 176 IHELMYNADTVRGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSDR 227



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 44/89 (49%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  S Y +    G   T  LAF  ++  TI+G L+   +LS NK++ +I   Y+E  
Sbjct: 1   MDFSFLSKYYSFFTNGAKYTIILAFFTVVIGTILGLLLSLMKLSKNKILKYIAVSYIEFI 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           R  P LV ++ +Y  + ++        +L
Sbjct: 61  RGTPVLVQLYIIYYGLPTIGIKFPEVPIL 89


>gi|288555160|ref|YP_003427095.1| glutamine ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288546320|gb|ADC50203.1| glutamine ABC transporter permease [Bacillus pseudofirmus OF4]
          Length = 220

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 13/233 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F        L +    +     I +    +G V+  F   L+R    K    +  
Sbjct: 1   MTTFAFISPHYMNVLPYLLKGLQLTLLITLVGVAIGFVIGAFIG-LARVSKNKFIYGIAT 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+   +I G P LV I   Y   F  P L             +  +  IA++    A+I
Sbjct: 60  VYVE--VIRGTPILVQILFIY---FGFPDLLGITL-------DKVTASIIAIALNAGAYI 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR  + ++ +GQ EA  +LGL+  +  R ++ PQA+R +IPPL +Q++  LK++SL 
Sbjct: 108 AEIVRGSVESIEKGQREAGRSLGLSSSQTMRYIIWPQALRRMIPPLGNQFIISLKDTSLF 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +   +L+  G    + T    E  L+   +YL ++I  ++F+ R+  ++  
Sbjct: 168 SVIAVGELLYQGRQYASATFTYFEPYLMVCVLYLMITIPASVFLRRVERRLDR 220



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 28/55 (50%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           +   G+    +IG  +G  R+S NK +  I  VYVEV R  P LV I F+Y    
Sbjct: 28  ITLVGVAIGFVIGAFIGLARVSKNKFIYGIATVYVEVIRGTPILVQILFIYFGFP 82


>gi|312792975|ref|YP_004025898.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180115|gb|ADQ40285.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 220

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++  A       V G+V +LF     R    K    +   Y+  F   G P L
Sbjct: 14  LKASVVTIELTAIAVTIGLVFGLVAALF-----RISKIKVLNYIGSFYVWLF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I   Y              I  +   P F++  IAL   + A+ AEI+R+ ++++ RG
Sbjct: 67  LQIFFIYY---------GLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+     
Sbjct: 118 QYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             + TG+  EI +  + IYL+L+ + +   N L  ++   E++
Sbjct: 178 KASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQQ 220



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L   V T  L    +    + G +    R+S  K++ +I   YV +FR  P L+ 
Sbjct: 9   YFPVLLKASVVTIELTAIAVTIGLVFGLVAALFRISKIKVLNYIGSFYVWLFRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLP 157
           IFF+Y  +  ++P
Sbjct: 69  IFFIYYGLPKIVP 81


>gi|148260140|ref|YP_001234267.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidiphilium cryptum JF-5]
 gi|326402908|ref|YP_004282989.1| putative amino acid ABC transporter permease [Acidiphilium
           multivorum AIU301]
 gi|146401821|gb|ABQ30348.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidiphilium cryptum JF-5]
 gi|325049769|dbj|BAJ80107.1| putative amino acid ABC transporter permease protein [Acidiphilium
           multivorum AIU301]
          Length = 250

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 4/235 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P+               +     I V    +G+ + L A  L+R       +    
Sbjct: 2   HFDWPYFWHQLLEPNGAFLEGLWLTIMISVGGQAIGLAIGLPA-ALARRSKMGVLRWPAR 60

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            YI  FL+ G P LV I   Y  L     +      +GG T++    +  +AL     A+
Sbjct: 61  AYI--FLMRGTPLLVQIVFIYTGLAAAGILRFHDIHLGGLTLAGNVQAGILALGLNEGAY 118

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI R+G+ AV RGQ EAA +LG+   +  R V+LPQA+R ++ P+ +Q+  +LKNS+L
Sbjct: 119 MAEIFRAGIDAVDRGQTEAAKSLGMVPWQILRYVVLPQALRVVLLPIGNQFNIMLKNSTL 178

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +G ++++ V  TI + T +  E+  +    +L+L+ +    M ++  ++  +
Sbjct: 179 VSVIGVSEMLLVTETINSATFRTFELYSVLALYFLALTTIWGAVMAQVERRMDRQ 233



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 32/80 (40%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  ++  G      IG      R S   ++ W  R Y+ + R  P LV I F
Sbjct: 18  AFLEGLWLTIMISVGGQAIGLAIGLPAALARRSKMGVLRWPARAYIFLMRGTPLLVQIVF 77

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
           +Y  + +   +  H I L  
Sbjct: 78  IYTGLAAAGILRFHDIHLGG 97


>gi|302024477|ref|ZP_07249688.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus suis 05HAS68]
          Length = 415

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----SRHFHEKTGKALPLLYIST 226
             + L    +T+  +    +    +G+++ +F T       +    +K    +  +YI  
Sbjct: 183 WQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGWIINIYIEI 242

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V   + Y        L               ++    +S  T A+++EIVR
Sbjct: 243 F--RGTPMIVQSMVIYYGTAQAFGLNL----------DRTLAAIFIVSINTGAYMSEIVR 290

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +  
Sbjct: 291 GGIFAVDKGQFEAATALGFTHNQTMRKIVLPQVIRNILPATGNEFVINIKDTSVLNVISV 350

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G T+  QT Q  +   +   IY  L+  +   +  +    
Sbjct: 351 VELYFSGNTVATQTYQYFQTFTVIAIIYFILTFTVTRILRAVEKHF 396



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
              +L G   T  ++  G I  T IG L+G  R +            K++ WI  +Y+E+
Sbjct: 183 WQQLLRGTGMTLLISILGTIIGTAIGLLIGVFRTAPKAANKALAIGQKVLGWIINIYIEI 242

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 243 FRGTPMIVQSMVIYYGTAQAF 263


>gi|116514929|ref|YP_813835.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116094244|gb|ABJ59397.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 486

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + + V G++L +      + +H        L  +  ++  G+P +
Sbjct: 285 LQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHG-------LANVIIYIFRGIPMM 337

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L + ++   P L            P F +  + L     A+I  IVR G  +V  G
Sbjct: 338 V---LAFFIYIGMPTLLGHKL-------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVG 387

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  DL   G  
Sbjct: 388 QWEAARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTN 447

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +I Q  Q  ++ LI   +YL +  ++    N +  K+
Sbjct: 448 LIAQNFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKM 484



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 39/71 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L+  G++ A + G ++G   ++ +K    +  V + +FR IP +V+ FF
Sbjct: 283 ALLQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFF 342

Query: 148 LYKSVLSVLPI 158
           +Y  + ++L  
Sbjct: 343 IYIGMPTLLGH 353


>gi|218132831|ref|ZP_03461635.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991704|gb|EEC57708.1| hypothetical protein BACPEC_00692 [Bacteroides pectinophilus ATCC
           43243]
          Length = 493

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 11/207 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             IFV + V  + L L      R  + K  +A+  +YIS  ++ G P ++ + + +   +
Sbjct: 295 LGIFVLTLVFSLPLGLLIM-FIRMSNLKILRAISKIYIS--IMRGTPLMLQLLVVFFGPY 351

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  + F    + S  F ++ I  S   AA+ AEI R+G+ AVP GQ EAA  LG T
Sbjct: 352 -------YLFGVSLSYSYRFYAVIIGFSLNYAAYFAEIYRAGIEAVPAGQREAASVLGYT 404

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQ ++ ++PP+T++ + L+K++SLA A+ + ++ ++   +      +I  
Sbjct: 405 GVQTFTRIVFPQMVKRVLPPVTNEVITLVKDTSLAFALAYTEMFTLAKQVAAA-QASIMP 463

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    Y   + ++A FM +L  K+ 
Sbjct: 464 LFVAGLFYYIFNFVVAWFMEKLELKLG 490



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 37/101 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   +  +    ++ +  +G L+   R+S  K++  I ++Y+ + R  P ++ +  +
Sbjct: 287 LSSGMAASLGIFVLTLVFSLPLGLLIMFIRMSNLKILRAISKIYISIMRGTPLMLQLLVV 346

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +     +  +        + + +               A I
Sbjct: 347 FFGPYYLFGVSLSYSYRFYAVIIGFSLNYAAYFAEIYRAGI 387


>gi|152994477|ref|YP_001339312.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835401|gb|ABR69377.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 506

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 14/238 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F +F  +         +  +   +V S ++G VL+L      +        A  
Sbjct: 3   FDWNYLFSLFSFSDFWWASWTVIKLSLASWVLSIIVGFVLAL-----GKQSKLVVFNAPS 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  F    LP LVL+   Y +        Q     G  +S  F +  IA+    +A+
Sbjct: 58  KFYIWLF--RSLPLLVLLIFVYNMP-------QLFPSTGGLLSDPFWAGLIAMVMCESAY 108

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI R GL+++P+GQ EAA ALG+    A  L+++PQA+R  +P LT++++ ++K SSL
Sbjct: 109 VAEIHRGGLLSIPKGQSEAARALGIRFAGAQWLIVIPQALRVALPSLTNEFIAIVKLSSL 168

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +   +++ VG  +  Q    +E +      Y+ +  +    + +L + + + ++K
Sbjct: 169 VSVISLTEVLMVGQRLYTQNFLVLETMAAVAIYYVLIVTIFDFLLGQLESYLDVTKRK 226



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 80/215 (37%), Gaps = 16/215 (7%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ +     ++    +  +  V       L+ +  + + I+G ++  G+ S   +     
Sbjct: 3   FDWNYLFSLFSFSDFWWASWTV-----IKLSLASWVLSIIVGFVLALGKQSKLVVFNAPS 57

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + Y+ +FR++P LV++ F+Y  +  + P     +  PF   L    +       + +   
Sbjct: 58  KFYIWLFRSLPLLVLLIFVYN-MPQLFPSTGGLLSDPFWAGLIAMVMCESAYVAEIHRGG 116

Query: 190 FV--------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
            +         +  LGI  +     +      +   ALP L      I  L +LV +   
Sbjct: 117 LLSIPKGQSEAARALGIRFAGAQWLIVIPQALRV--ALPSLTNEFIAIVKLSSLVSVISL 174

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            ++      L   NF+   T++   +   + ++ +
Sbjct: 175 TEVLMVGQRLYTQNFLVLETMAAVAIYYVLIVTIF 209


>gi|315641051|ref|ZP_07896134.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483220|gb|EFU73733.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 488

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 18/232 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F        ++    T+        F  + G +L+L      +    +  + + 
Sbjct: 271 FQKDQNFFQKYYKYYVNGAGYTIFLAIIGVFFGAIFGAILALI-----KLGKIRILRWIA 325

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI    + G P LV I + Y           F          +  +  IAL+  +AA+
Sbjct: 326 TAYIE--YVRGTPLLVQIFIVY-----------FGSGIIGIDLSKLAAGCIALALNSAAY 372

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ AV +GQMEAA +LG+  R+A + ++ PQA+++I+P L ++++ ++K SS+
Sbjct: 373 VAEIIRAGISAVNKGQMEAARSLGMNQRQAMQFIIFPQAIKNILPALGNEFVTVIKESSV 432

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G ++L+   G +   + +     +I   IY  L+  ++  +     ++
Sbjct: 433 VSVIGVSELIFQAGNVQGASFKPFLPYVIVSLIYFVLTFSMSRLLGVAERRM 484



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T +LA  G+    I G ++   +L   +++ WI   Y+E  R  P LV 
Sbjct: 281 YYKYYVNGAGYTIFLAIIGVFFGAIFGAILALIKLGKIRILRWIATAYIEYVRGTPLLVQ 340

Query: 145 IFFLYKSV 152
           IF +Y   
Sbjct: 341 IFIVYFGS 348


>gi|117928847|ref|YP_873398.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidothermus cellulolyticus 11B]
 gi|117649310|gb|ABK53412.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Acidothermus cellulolyticus 11B]
          Length = 559

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 18/229 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +   L F    + T  +I V SF L I   +++   RLS+    +      LL+   +++
Sbjct: 6   HYFTLPFLWQGLATAVEITVISFALAIPPSIAVALMRLSKWRSVRV-----LLWPYVWVM 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +   + +    P L       G  VSP F +  IAL     AF  EI++ G+
Sbjct: 61  RGTPLLLQLLFWFDI---LPTL-------GFRVSP-FTTAVIALVLNEIAFSGEIIKGGI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV   Q EA +ALG++       V+LPQA RSI P L+++ + +LKN+SLA  +   +L
Sbjct: 110 SAVKSAQREAGLALGMSRWTILHRVILPQAFRSIAPALSNELIIMLKNTSLASVIAVDEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 I+    + + +      +YL  S  + +  +    ++ ++ K+
Sbjct: 170 TLRSQQIVAVNFEYLAVFGAAGALYLIASSAVTVLQSWAERRLNIERKQ 218



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 3/123 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G      +       A      V   RLS  + V  +   YV V R  P L+ + F 
Sbjct: 13  LWQGLATAVEITVISFALAIPPSIAVALMRLSKWRSVRVLLWPYVWVMRGTPLLLQLLFW 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV---FSFVLGIVLSLFAT 205
           +  + ++             + LN    S   +    +A           LG+       
Sbjct: 73  FDILPTLGFRVSPFTTAVIALVLNEIAFSGEIIKGGISAVKSAQREAGLALGMSRWTILH 132

Query: 206 RLS 208
           R+ 
Sbjct: 133 RVI 135


>gi|116255125|ref|YP_770959.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259773|emb|CAK02865.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 313

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +   +V+  +   + S +  P+    +      N   L     T+   A +   + +
Sbjct: 28  WRWVAVALVLVSVAGMIRSAISNPEFQWPIVAQYLFNPLILDGLWQTVLITAVVMALATL 87

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDK 248
            G + +L     S+         +       +   G P LV + + Y L           
Sbjct: 88  GGTIAALMMLSPSKLLSVPAAAFV-------WFFRGTPALVQLIIWYNLSIVVKDITLWL 140

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P +G    +  + +    +S  +ALS + A ++AEIVRSGL +V +GQ EA+  LG+   
Sbjct: 141 PGVGTVYSVSTNDIMTPLVSAIVALSLHEAGYMAEIVRSGLKSVNKGQYEASACLGMNPS 200

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R ++LPQAMR IIPP  ++ +NLLK +SL   +   DL+    +I  +T + I ++L
Sbjct: 201 LALRRIVLPQAMRIIIPPTGNETINLLKTTSLVSIIAVGDLLYSAQSIYARTFETIPLLL 260

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  F YL++  +++     L    +  E +
Sbjct: 261 VVSFWYLAVVSIMSGGQFYLEKHFSRDEHR 290



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 29/65 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    M  AT+ GT+     LS +KL++     +V  FR  P LV +   
Sbjct: 67  ILDGLWQTVLITAVVMALATLGGTIAALMMLSPSKLLSVPAAAFVWFFRGTPALVQLIIW 126

Query: 149 YKSVL 153
           Y   +
Sbjct: 127 YNLSI 131


>gi|148269470|ref|YP_001243930.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga petrophila RKU-1]
 gi|147735014|gb|ABQ46354.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga petrophila RKU-1]
          Length = 216

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 112/230 (48%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +P  + +    L           ++   + ++G+ + +F   + R    +  +    +Y+
Sbjct: 1   MPEWLSVIVDNLPLLLKGALRTLQLTSLAVLIGLAIGIFVG-MGRLSKYRIIRYPSSIYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P +V + L Y           F           F +  +AL   + A++AEI
Sbjct: 60  EF--LRGTPLMVQLFLVY-----------FGLPELGLEFDRFTAAVVALGINSGAYVAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ +VP+GQ EAA +LG++H +A   V+LPQA R I+P L ++++ L K+SSLA+ +
Sbjct: 107 VRAGIQSVPKGQYEAARSLGMSHAQAMIYVILPQAFRHILPALGNEFIALAKDSSLAMVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L+     I+++T  +  I      IY +++  ++  +  +  ++ +
Sbjct: 167 GTVELMRSAQYIVSRTFMSFPIYGGVALIYFAITFSVSRLVKFVEGRLKV 216



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++    IG  VG GRLS  +++ +   +YVE  R  P +V +F +
Sbjct: 15  LLKGALRTLQLTSLAVLIGLAIGIFVGMGRLSKYRIIRYPSSIYVEFLRGTPLMVQLFLV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +    D        + +N
Sbjct: 75  YFGLPELGLEFDRFTAAVVALGIN 98


>gi|300811214|ref|ZP_07091721.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497801|gb|EFK32816.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 485

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + + V G++L +      + +H        L  +  ++  G+P +
Sbjct: 284 LQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHG-------LANVIIYIFRGIPMM 336

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L + ++   P L            P F +  + L     A+I  IVR G  +V  G
Sbjct: 337 V---LAFFIYIGMPTLLGHKL-------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVG 386

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  DL   G  
Sbjct: 387 QWEAARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTN 446

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +I Q  Q  ++ LI   +YL +  ++    N +  K+
Sbjct: 447 LIAQNFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKM 483



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 39/71 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L+  G++ A + G ++G   ++ +K    +  V + +FR IP +V+ FF
Sbjct: 282 ALLQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFF 341

Query: 148 LYKSVLSVLPI 158
           +Y  + ++L  
Sbjct: 342 IYIGMPTLLGH 352


>gi|134298596|ref|YP_001112092.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum reducens MI-1]
 gi|134051296|gb|ABO49267.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 221

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 114/229 (49%), Gaps = 14/229 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           + +         + +    ++   +   G ++ LF   L +    K  K   + YI  F 
Sbjct: 4   LQIWKDAFPILMMGLKLTIQLTSLAVFFGCIIGLFVG-LGKMSRIKLIKIPAITYIEFF- 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P LV + L Y   F  P +              F S    LS  + A+ AEI R+G
Sbjct: 62  -RGSPLLVQLFLIY---FGLPQILG-------HPVDRFWSAVAVLSLNSGAYCAEIFRAG 110

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ +GQMEAA +LG+TH +A R V+LPQA + +IPPL ++++ ++K++SL   +G A+
Sbjct: 111 IQSIEKGQMEAARSLGMTHIQAMRYVILPQAFKRVIPPLGNEFIAMMKDTSLVSVIGMAE 170

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA-LFMNRLNAKIALKE 396
           L   G   I+ T +A +I  +    Y+ +++ I+  F+NR+  ++   +
Sbjct: 171 LARSGQLYISTTYKAFQIWFLVAIFYIVMTLFISEFFVNRMERRLQAGD 219



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 35/76 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +++G   T  L    +    IIG  VG G++S  KL+      Y+E FR  P LV +F +
Sbjct: 14  LMMGLKLTIQLTSLAVFFGCIIGLFVGLGKMSRIKLIKIPAITYIEFFRGSPLLVQLFLI 73

Query: 149 YKSVLSVLPIPDHSIV 164
           Y  +  +L  P     
Sbjct: 74  YFGLPQILGHPVDRFW 89


>gi|320159829|ref|YP_004173053.1| amino acid ABC transporter permease protein [Anaerolinea
           thermophila UNI-1]
 gi|319993682|dbj|BAJ62453.1| amino acid ABC transporter permease protein [Anaerolinea
           thermophila UNI-1]
          Length = 274

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 8/257 (3%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-F 203
             F + +   ++      + +   +  N     F  +       + V     G+VL +  
Sbjct: 21  NVFRWDAGWLLVLAASALLAILVLVVGNPFDRIFRFVLDGLRVTVMVTLVTFGLVLVVGI 80

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ----LHFDKPVLGQFNFIGG 259
              L R  H    + L  LY+   ++ G+P LV +   Y     +  D         +  
Sbjct: 81  IGALGRLTHIAPLRGLATLYVE--VVRGIPLLVQLYFWYYAFPSIVRDLGTQWNVESMKN 138

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
              +P  M+    L+    A++ E+ R+G+ ++P+GQMEAA +LG+T+ +A R ++LPQA
Sbjct: 139 FVANPYVMA-IAGLTLCYGAYMTEVYRAGIQSIPKGQMEAARSLGMTYFQAMRYIILPQA 197

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R I+PP+ ++++ LLK+SSL  AV  ADL   G      T   + I L+   +YL +++
Sbjct: 198 IRVILPPVGNEFITLLKDSSLVSAVAVADLTRRGREFQAITPLPLHIYLMIGLMYLIMTL 257

Query: 380 MIALFMNRLNAKIALKE 396
           + A  +  + A+++ + 
Sbjct: 258 LSARVVAMIEARMSKER 274



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                    +L G   T  +         ++G +   GRL+    +  +  +YVEV R I
Sbjct: 48  NPFDRIFRFVLDGLRVTVMVTLVTFGLVLVVGIIGALGRLTHIAPLRGLATLYVEVVRGI 107

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVL 165
           P LV ++F Y +  S++        +
Sbjct: 108 PLLVQLYFWYYAFPSIVRDLGTQWNV 133


>gi|290957468|ref|YP_003488650.1| binding-protein-dependent transporter [Streptomyces scabiei 87.22]
 gi|260646994|emb|CBG70093.1| putative binding-protein-dependent transporter [Streptomyces
           scabiei 87.22]
          Length = 313

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 5/240 (2%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +  + +G+  +          +     + V S V+G+V  +    + R        ++ 
Sbjct: 52  QAKKINWGVIPDFFFDDRIIEGVLNTLLLTVVSMVIGVVGGILL-AVMRLSKNPVTSSIA 110

Query: 221 LLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             YI  F   G P LV + + + L   F+   LG       S+     ++  + L    A
Sbjct: 111 WFYIWFF--RGTPVLVQLFVWFNLGLVFEYINLGPIYKDYWSSFMTPLLTALLGLGLNEA 168

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R+GL++V  GQ EA+ ALG++H +  R +++PQAMR I+PP  ++ +N+LK +
Sbjct: 169 AYMAEICRAGLLSVDEGQTEASHALGMSHARTLRRIVIPQAMRVIVPPTGNEVINMLKTT 228

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL   V F DL+     I   +G  +E++ +    YL L+ + ++    L    A    +
Sbjct: 229 SLVSTVQFVDLLKSAQDIGQSSGATVELLFLAAAWYLVLTSIFSVGQYYLERHYAKGSSR 288



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 3/120 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I+ G++P   D  +   I+ G +NT  L    M+   + G L+   RLS N + + I   
Sbjct: 56  INWGVIP---DFFFDDRIIEGVLNTLLLTVVSMVIGVVGGILLAVMRLSKNPVTSSIAWF 112

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+  FR  P LV +F  +   L    I    I   +        L+         A    
Sbjct: 113 YIWFFRGTPVLVQLFVWFNLGLVFEYINLGPIYKDYWSSFMTPLLTALLGLGLNEAAYMA 172


>gi|218885964|ref|YP_002435285.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756918|gb|ACL07817.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 263

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 111/228 (48%), Gaps = 15/228 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              R L F    +    K+ V S +  I + L    L R    +    +   Y+   ++ 
Sbjct: 51  PYWRLLQFLPDGIAVTFKVTVLSILCSIPIGLITG-LGRLSRNRLINLVASTYVE--VVR 107

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LV +   Y              +G     P+ ++  IALS    A++ E+ R+G+ 
Sbjct: 108 GIPLLVQLFYIYY------------ALGRFLKVPDLLAAIIALSVCYGAYMGEVFRAGID 155

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EAA +LG    +   +V+LPQA R+I+PP+ ++++ +LK++SL   +  AD++
Sbjct: 156 SISKGQTEAARSLGFNRAETMFMVILPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADIL 215

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G    +++    E   +   IYL +++ ++  ++ + +++   +++
Sbjct: 216 RRGREFASESFLYFETYTMVALIYLLITLFLSKGVSIMESRLNYYDRR 263



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 41/81 (50%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                    +  G   TF +    ++ +  IG + G GRLS N+L+  +   YVEV R I
Sbjct: 50  EPYWRLLQFLPDGIAVTFKVTVLSILCSIPIGLITGLGRLSRNRLINLVASTYVEVVRGI 109

Query: 140 PPLVVIFFLYKSVLSVLPIPD 160
           P LV +F++Y ++   L +PD
Sbjct: 110 PLLVQLFYIYYALGRFLKVPD 130


>gi|88856491|ref|ZP_01131149.1| putative ABC transporter permease [marine actinobacterium PHSC20C1]
 gi|88814358|gb|EAR24222.1| putative ABC transporter permease [marine actinobacterium PHSC20C1]
          Length = 340

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 11/266 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +RN+  ++++  L   V+       +          + R       T+       + + +
Sbjct: 35  WRNVVAVILVAMLVLFVVDASQREAYGWENFGKFIFDKRISQAAGYTLLLTVYSMIIAII 94

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQLH----FDKPV 250
           LG+ L++      R       K +  LY+  F    +   LV   L   ++       P 
Sbjct: 95  LGVTLAVM-----RLSDNPVVKGIAWLYLWVFRGTPVYVQLVFWGLFATIYSTIDIGVPF 149

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              +  +  + +   F    I L+   +A++AEIVR+G+++V +GQ EAA ALG++  + 
Sbjct: 150 TEPWLSVETNDLINVFWLAVIGLALNESAYMAEIVRAGILSVDKGQDEAATALGMSWLQT 209

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI 369
              V++PQAMR IIPP  ++ +++LK +SL  A+ F+ +L      I       I ++L+
Sbjct: 210 MTRVVIPQAMRIIIPPTGNEVISMLKTTSLVTAIPFSLELYGRSRDISVVIFDPIPLLLV 269

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               YL  + ++ +    L  + +  
Sbjct: 270 ASAWYLLFTSILMVGQYFLEKRFSRG 295



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 7/101 (6%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L    MI A I+G  +   RLS N +V  I  +Y+ VFR  P  V + F        
Sbjct: 81  TLLLTVYSMIIAIILGVTLAVMRLSDNPVVKGIAWLYLWVFRGTPVYVQLVFWGLFATIY 140

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                    +  G+      LS  T  +     + V    L
Sbjct: 141 -------STIDIGVPFTEPWLSVETNDLINVFWLAVIGLAL 174


>gi|325126636|gb|ADY85966.1| Glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 486

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + + V G++L +      + +H        L  +  ++  G+P +
Sbjct: 285 LQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHG-------LANVIIYIFRGIPMM 337

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L + ++   P L            P F +  + L     A+I  IVR G  +V  G
Sbjct: 338 V---LAFFIYIGMPTLLGHKL-------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVG 387

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  DL   G  
Sbjct: 388 QWEAARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTN 447

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +I Q  Q  ++ LI   +YL +  ++    N +  K+
Sbjct: 448 LIAQNFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKM 484



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 39/71 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L+  G++ A + G ++G   ++ +K    +  V + +FR IP +V+ FF
Sbjct: 283 ALLQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFF 342

Query: 148 LYKSVLSVLPI 158
           +Y  + ++L  
Sbjct: 343 IYIGMPTLLGH 353


>gi|317486285|ref|ZP_07945117.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316922455|gb|EFV43709.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 233

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 12/190 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +     +  + + +LYI    I G P +V +     L+F  P+             P  +
Sbjct: 45  ANTSRSRFLRGIAILYIEA--IRGTPLIVQVMF---LYFGLPLALGMRI-------PPDV 92

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  IA+   + A+IAEIVR  + ++ +GQ EA  + GLT  +    ++ PQA R +IPPL
Sbjct: 93  AGVIAIGVNSGAYIAEIVRGAIQSIDKGQTEAGRSTGLTQAQTMLYIIWPQAFRRMIPPL 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T+Q +  LK++SL V +G  +L   G  II    +A E+ L     YL++++ I+  +  
Sbjct: 153 TNQCIISLKDTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAIFYLAMTLSISAVLRY 212

Query: 388 LNAKIALKEK 397
              K+ +  +
Sbjct: 213 YERKLMIGRR 222


>gi|153855009|ref|ZP_01996222.1| hypothetical protein DORLON_02228 [Dorea longicatena DSM 13814]
 gi|149752506|gb|EDM62437.1| hypothetical protein DORLON_02228 [Dorea longicatena DSM 13814]
          Length = 229

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 115/227 (50%), Gaps = 16/227 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---T 226
           F+++    + T  +     + VF+ ++G+VL  F   + R  H+KTGK   L  I     
Sbjct: 12  FIDDNRWRYITDGLKITLLVTVFAVLIGVVLG-FLIAIVRTTHDKTGKLKILNAICKVYL 70

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V + + Y + F            GS    + +   +A    + A++AEI R
Sbjct: 71  TVIRGTPVVVQLMIIYFIIF------------GSVDISKVVVAIVAFGINSGAYVAEIFR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++++  GQ EA  +LG  + +    +++PQA ++++P L +++++LLK +S++  +  
Sbjct: 119 SGIMSIDNGQFEAGRSLGFNYAQTMMYIVMPQAFKNVLPTLCNEFISLLKETSVSGYIAL 178

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            DL   G  I ++T  A   ++    IYL++ ++    ++ L  ++ 
Sbjct: 179 QDLTKGGDIIRSRTYDAFMPLIAVALIYLAMVMIFTKLVSLLERRLR 225



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 5/77 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVF 136
           D +    I  G   T  +    ++   ++G L+   R +       K++  IC+VY+ V 
Sbjct: 14  DDNRWRYITDGLKITLLVTVFAVLIGVVLGFLIAIVRTTHDKTGKLKILNAICKVYLTVI 73

Query: 137 RNIPPLVVIFFLYKSVL 153
           R  P +V +  +Y  + 
Sbjct: 74  RGTPVVVQLMIIYFIIF 90


>gi|89100885|ref|ZP_01173735.1| Amino acid ABC-type transporter, permease component [Bacillus sp.
           NRRL B-14911]
 gi|89084421|gb|EAR63572.1| Amino acid ABC-type transporter, permease component [Bacillus sp.
           NRRL B-14911]
          Length = 226

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 14/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + +F LG++L+ F   L+R    K   AL   Y+  F   G P LV I + + 
Sbjct: 26  YFTIPLTLITFALGLILAFFV-ALARLSSIKPLVALARFYVWIF--RGTPLLVQIFILF- 81

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F           F +  IA +    A+ +EI+R+ ++++P+GQ EAA ++
Sbjct: 82  ----------FGLPSVGITLDPFPAAVIAFTLNKGAYSSEIIRAAILSIPKGQWEAASSV 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +A R +++PQA+R  +PPL + +++L+K++SLA  +   ++   G  I   T + 
Sbjct: 132 GMTRSQAMRRIIVPQAVRVSLPPLGNSFISLVKDTSLAATITVTEMFQKGQQIAAATYEP 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +   FIYL  S +++ F N+L  +    
Sbjct: 192 LWLYIEVAFIYLIFSTVLSYFQNKLEDRFGRS 223



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 35/91 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G   T  L         I+   V   RLS+ K +  + R YV +FR  P 
Sbjct: 14  ADSFFPILKAGIYFTIPLTLITFALGLILAFFVALARLSSIKPLVALARFYVWIFRGTPL 73

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV IF L+  + SV    D          LN
Sbjct: 74  LVQIFILFFGLPSVGITLDPFPAAVIAFTLN 104


>gi|293395619|ref|ZP_06639902.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291421938|gb|EFE95184.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 220

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L    LT+  +        VLG VL+L      R         L  
Sbjct: 2   QESIQLALDSAPFLLKGAILTLQLSLGGMALGLVLGFVLALM-----RLSRFWPLSWLSR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+S F   G P +  + + Y        L QF           F +  I LS  TAA+ 
Sbjct: 57  IYVSLF--RGTPLIAQLFMIYY------GLPQFG-----IELDPFPAALIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R V+LPQA R+ +PPL + ++ L+K++SLA
Sbjct: 104 SETLRAAIASIDKGQWEAAASIGMTPWQTLRRVILPQAARTALPPLGNSFIGLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   NRL A +  ++K+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATLLSALQNRLEAHVNRQDKE 220



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G ++   RLS    ++W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGAILTLQLSLGGMALGLVLGFVLALMRLSRFWPLSWLSRIYVSLFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPFPAALIGLSLN 98


>gi|312135671|ref|YP_004003009.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor owensensis OL]
 gi|311775722|gb|ADQ05209.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor owensensis OL]
          Length = 220

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++  A       + G+V +LF     R    K    +   Y+  F   G P L
Sbjct: 14  LKASVVTIELTAIAVTIGLIFGLVAALF-----RISKIKLLNYVGSFYVWLF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I   Y              I  +   P F++  IAL   + A+ AEI+R+ ++++ RG
Sbjct: 67  LQIFFIYY---------GLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+     
Sbjct: 118 QYEAAKALGMTYIQTMRYVIIPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +QTG+  EI L  + IYL+L+ +     N L  ++   E+ 
Sbjct: 178 KASQTGRDAEIYLAALVIYLALTTIFTTIFNWLEKRLGKYEQH 220



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L   V T  L    +    I G +    R+S  KL+ ++   YV +FR  P L+ 
Sbjct: 9   YFPVLLKASVVTIELTAIAVTIGLIFGLVAALFRISKIKLLNYVGSFYVWLFRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLP 157
           IFF+Y  +  ++P
Sbjct: 69  IFFIYYGLPKIVP 81


>gi|218886439|ref|YP_002435760.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757393|gb|ACL08292.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 337

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 4/185 (2%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       +   + YI   +I G P LV I L Y +     +      +G   +SP  
Sbjct: 154 LCRISINPMLRWGAITYIE--IIRGSPLLVQIFLWYFV-VGTLINALLEHVGLGGISP-L 209

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               +AL+ +T A++AEIVR+G+ +V RGQMEAA +LG+ + +A R V+LPQA R I+PP
Sbjct: 210 WYGVMALALFTGAYVAEIVRAGIQSVHRGQMEAARSLGMNYAQAMRKVILPQAFRRIMPP 269

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L  Q+++L+K+SSL   +   +L      ++  + Q  E+ ++   +YL L+  ++LF+ 
Sbjct: 270 LAGQFISLIKDSSLLGVIAIRELTKATREVVTTSLQPFELWIVCAVLYLVLTFTLSLFVQ 329

Query: 387 RLNAK 391
            L  +
Sbjct: 330 YLERR 334



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +I   +IG + G  R+S N ++ W    Y+E+ R  P LV IF  
Sbjct: 127 LLEGLWITLEVSVLAIIGGIVIGVVTGLCRISINPMLRWGAITYIEIIRGSPLLVQIFLW 186

Query: 149 YKSV 152
           Y  V
Sbjct: 187 YFVV 190


>gi|325685063|gb|EGD27198.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 485

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + + V G++L +      + +H        L  +  ++  G+P +
Sbjct: 284 LQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHG-------LANVIIYIFRGIPMM 336

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L + ++   P L            P F +  + L     A+I  IVR G  +V  G
Sbjct: 337 V---LAFFIYIGMPTLLGHKL-------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVG 386

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  DL   G  
Sbjct: 387 QWEAARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGAN 446

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +I Q  Q  ++ LI   +YL +  ++    N +  K+
Sbjct: 447 LIAQNFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKM 483



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 39/71 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L+  G++ A + G ++G   ++ +K    +  V + +FR IP +V+ FF
Sbjct: 282 ALLQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFF 341

Query: 148 LYKSVLSVLPI 158
           +Y  + ++L  
Sbjct: 342 IYIGMPTLLGH 352


>gi|104774800|ref|YP_619780.1| glutamine ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103423881|emb|CAI98922.1| Glutamine ABC transporter, substrate binding / permease protein
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 486

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + + V G++L +      + +H        L  +  ++  G+P +
Sbjct: 285 LQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHG-------LANVIIYIFRGIPMM 337

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L + ++   P L            P F +  + L     A+I  IVR G  +V  G
Sbjct: 338 V---LAFFIYIGMPTLLGHKL-------PLFTAGILTLMLDEGAYIGAIVRGGFESVDVG 387

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  DL   G  
Sbjct: 388 QWEAARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGAN 447

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +I Q  Q  ++ LI   +YL +  ++    N +  K+
Sbjct: 448 LIAQNFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKM 484



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 39/71 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L+  G++ A + G ++G   ++ +K    +  V + +FR IP +V+ FF
Sbjct: 283 ALLQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFF 342

Query: 148 LYKSVLSVLPI 158
           +Y  + ++L  
Sbjct: 343 IYIGMPTLLGH 353


>gi|312621848|ref|YP_004023461.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202315|gb|ADQ45642.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 220

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++  A       V G+V +LF     R    K    +   Y+  F   G P L
Sbjct: 14  LKASVVTIELTAIAVTIGLVFGLVAALF-----RISKIKLLNYIGSFYVWLF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I   Y              I  +   P F++  IAL   + A+ AEI+R+ ++++ RG
Sbjct: 67  LQIFFIYY---------GLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+     
Sbjct: 118 QYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             + TG+  EI L  + IYL+L+ + +   N L  ++   E++
Sbjct: 178 KASATGRDAEIYLAALVIYLALTTVFSTIFNWLEKRLGKYEQR 220



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L   V T  L    +    + G +    R+S  KL+ +I   YV +FR  P L+ 
Sbjct: 9   YFPVLLKASVVTIELTAIAVTIGLVFGLVAALFRISKIKLLNYIGSFYVWLFRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLP 157
           IFF+Y  +  ++P
Sbjct: 69  IFFIYYGLPKIVP 81


>gi|322832887|ref|YP_004212914.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168088|gb|ADW73787.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 290

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 9/270 (3%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           V    +  I   VVI  L   +++                     L     T+  +    
Sbjct: 24  VPQRYYGRIFASVVILLLLALLVNAFAHGKIEWQYVAQFLTAKAILFGLGNTIVMSVLAM 83

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
               V G+++++      R       +++ + Y  T++  G P ++ + L + L    PV
Sbjct: 84  ALGIVFGVIIAVM-----RMSQNPVLRSVAMGY--TWIFRGTPLILQLLLWFNLALIFPV 136

Query: 251 L--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           +       I    +   F +  + LS    A+ +E+VR+GLI+V  GQ EAA ++G+T  
Sbjct: 137 IAIPGVFSIQTVDIMTPFTAALLGLSINQGAYTSEVVRAGLISVDLGQYEAAKSIGMTRL 196

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            A R ++LPQAMR IIPP+ +++++++K +SLA  + +++++    TI     + +E++ 
Sbjct: 197 HALRRIILPQAMRVIIPPIGNEFISMVKTTSLASMIQYSEVLYNAQTIYFANARVMELLF 256

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    YL +  +++L  NRL        ++
Sbjct: 257 VAGIWYLVVVTVLSLGQNRLERYFGRGTRR 286



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 31/68 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A AIL G  NT  ++   M    + G ++   R+S N ++  +   Y  +FR  P ++ +
Sbjct: 65  AKAILFGLGNTIVMSVLAMALGIVFGVIIAVMRMSQNPVLRSVAMGYTWIFRGTPLILQL 124

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 125 LLWFNLAL 132


>gi|226355645|ref|YP_002785385.1| ABC transporter permease [Deinococcus deserti VCD115]
 gi|226317635|gb|ACO45631.1| putative ABC transporter, permease component [Deinococcus deserti
           VCD115]
          Length = 264

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 115/213 (53%), Gaps = 8/213 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V S V+G+V+ + A  + +       +A   L+I  +LI G P LV I   Y  
Sbjct: 60  MTLQLTVVSGVIGLVIGMIAG-IQKTSSNWLVRAPASLFI--WLIRGTPLLVQILFVYN- 115

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +      IG      EF S  IAL+    A+ AE++R+G++A+PRGQ EAA +LG
Sbjct: 116 ----ALPPLLAAIGLKVELNEFWSAVIALALNVGAYNAEVIRAGILAIPRGQTEAARSLG 171

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       V+LPQA+R ++PPL +  + LLK+SSLA  +   +L   G  + +++ Q +
Sbjct: 172 LSGGLTMSTVVLPQALRIVVPPLVNNLVALLKDSSLASTIALLELSLAGSRVSSESFQPV 231

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++     +YL+L+ ++ LF ++L  ++ +  +
Sbjct: 232 PVLTTIAAVYLALTTVMTLFTDQLEKRVKVASR 264



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                 A   + G   T  L     +   +IG + G  + S+N LV     +++ + R  
Sbjct: 45  DPIGPRADLFVEGARMTLQLTVVSGVIGLVIGMIAGIQKTSSNWLVRAPASLFIWLIRGT 104

Query: 140 PPLVVIFFLYKSVL 153
           P LV I F+Y ++ 
Sbjct: 105 PLLVQILFVYNALP 118


>gi|261340316|ref|ZP_05968174.1| L-cystine ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317407|gb|EFC56345.1| L-cystine ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 222

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG VL+L      R  H    + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAVFTLQLSIGGMFFGLVLGFVLALM-----RMSHVLPIRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISVF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 SETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQER 219



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    + W+ R Y+ VFR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSHVLPIRWLARFYISVFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPAAMIGLSLN 98


>gi|242372074|ref|ZP_04817648.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis M23864:W1]
 gi|242350186|gb|EES41787.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus epidermidis M23864:W1]
          Length = 239

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 115/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITIVTFILGLIIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ +R
Sbjct: 91  GRLITNDADNQWTLAP-VVAAIIGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L L+K++SL   +  A++      + + + + + I +
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTSYEYLTIYI 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      ++I    +
Sbjct: 210 LVAIMYWVVCFIISIIQGWYESRIERGYR 238



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 40/103 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITIVTFILGLIIALFTALMRISTSKILRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +  +   A   +   ++ I
Sbjct: 91  GRLITNDADNQWTLAPVVAAIIGLSFNVGAYASEIIRGGIISI 133


>gi|314934479|ref|ZP_07841838.1| amino acid ABC transporter, permease protein [Staphylococcus caprae
           C87]
 gi|313652409|gb|EFS16172.1| amino acid ABC transporter, permease protein [Staphylococcus caprae
           C87]
          Length = 239

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 114/209 (54%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG+ ++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITIVTFILGLAIALF-TALMRISTSKILRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ +R
Sbjct: 91  GRLITNDADNQWTLAP-VVAAIIGLSFNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L L+K++SL   +  A++      + + + + + I +
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTSYEYLTIYI 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      ++I    +
Sbjct: 210 LVAIMYWVVCFIISIIQGWYESRIERGYR 238



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 39/103 (37%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I    I       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITIVTFILGLAIALFTALMRISTSKILRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +  +   A   +   ++ I
Sbjct: 91  GRLITNDADNQWTLAPVVAAIIGLSFNVGAYASEIIRGGIISI 133


>gi|315640083|ref|ZP_07895208.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484211|gb|EFU74682.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 536

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 17/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-----HFHEKTGKALPLLYIS 225
                LS   LT+           ++G+++ +F T          F +K       +YI 
Sbjct: 305 YWKLFLSGAALTLFVAVVSTFAGTIIGLLVGVFRTLPVSENPVSRFFQKVFNGFLTIYIE 364

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P +V   + +            N           ++  + +S  T A+++EIV
Sbjct: 365 VF--RGTPMMVQAMVIFY-GLALAFHIDLN---------RTVAALLIVSINTGAYMSEIV 412

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AV +GQ EAA A+G+ HR+    V+LPQ +R+I+P + ++ +  +K++++   + 
Sbjct: 413 RGGIFAVDKGQFEAAQAIGMNHRQTMTKVVLPQVLRNILPAIGNETVINIKDTAVLSVIS 472

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             DL   G        Q      I   IYL +++     +  +  K+
Sbjct: 473 VTDLFFAGSVASGTNLQFFPTFTIIGIIYLVMTLSATKLLRLMEKKM 519



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
             Y    L G   T ++A       TIIG LVG  R              K+      +Y
Sbjct: 303 QQYWKLFLSGAALTLFVAVVSTFAGTIIGLLVGVFRTLPVSENPVSRFFQKVFNGFLTIY 362

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLP 157
           +EVFR  P +V    ++  +     
Sbjct: 363 IEVFRGTPMMVQAMVIFYGLALAFH 387


>gi|313124773|ref|YP_004035032.1| ABC amino acid transporter permease/periplasmic component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312281336|gb|ADQ62055.1| ABC-type amino acid transport system, permease and periplasmic
           component [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 486

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + + V G++L +      + +H        L  +  ++  G+P +
Sbjct: 285 LQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHG-------LANVIIYIFRGIPMM 337

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L + ++   P L            P F +  + L     A+I  IVR G  +V  G
Sbjct: 338 V---LAFFIYIGMPTLLG-------HKLPLFTAGILTLMLDEGAYIGAIVRGGFESVDVG 387

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  DL   G  
Sbjct: 388 QWEAARSLGLPYYKALWKVVAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMDLTQTGTN 447

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +I Q  Q  ++ LI   +YL +  ++    N +  K+
Sbjct: 448 LIAQNFQGFKMWLIIAVMYLIIITLLTWLSNYIQKKM 484



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 39/71 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L+  G++ A + G ++G   ++ +K    +  V + +FR IP +V+ FF
Sbjct: 283 ALLQGLWMTIELSIVGILAALVFGLILGIMGIAEHKFWHGLANVIIYIFRGIPMMVLAFF 342

Query: 148 LYKSVLSVLPI 158
           +Y  + ++L  
Sbjct: 343 IYIGMPTLLGH 353


>gi|116492831|ref|YP_804566.1| ABC-type amino acid transport system, permease and periplasmic
           component [Pediococcus pentosaceus ATCC 25745]
 gi|116102981|gb|ABJ68124.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 483

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S     +  +F   L      K    +    I  F   GLP LVL    Y    
Sbjct: 289 VILTVLSIFFATIFGIFFGMLG-VVPNKFANGVSTTVIYIF--RGLPLLVLALFIYT--- 342

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L            P F++  I L+    A+ A  V+ G+ AV  GQMEAA +LGL 
Sbjct: 343 GVPNLVG-------EKIPAFVAGIITLTLNEGAYTAAFVKGGIEAVDGGQMEAARSLGLP 395

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + KA R V+LPQ ++ ++P   +Q++  LK++S+   +G  +L   G  II +  +  +I
Sbjct: 396 YGKAMRRVILPQGLKIMVPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFKI 455

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   IYL +  ++      +  ++ 
Sbjct: 456 WTMVALIYLVIITLLTWLSKWVERRMK 482



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 34/77 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L    +  ATI G   G   +  NK    +    + +FR +P LV+  F
Sbjct: 280 ALLGGLEQTVILTVLSIFFATIFGIFFGMLGVVPNKFANGVSTTVIYIFRGLPLLVLALF 339

Query: 148 LYKSVLSVLPIPDHSIV 164
           +Y  V +++     + V
Sbjct: 340 IYTGVPNLVGEKIPAFV 356


>gi|302872378|ref|YP_003841014.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302575237|gb|ADL43028.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 220

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 110/223 (49%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++  A       + G+V +LF     R    K    +   Y+  F   G P L
Sbjct: 14  LKASVVTIELTAIAVTIGLIFGLVAALF-----RISKIKLLNYIGSFYVWLF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I   Y              I  +   P F++  IAL   + A+ AEI+R+ ++++ RG
Sbjct: 67  LQIFFIYY---------GLPKIVPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+     
Sbjct: 118 QYEAAKALGMTYIQTMRYVIIPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +QTG+  EI L  + IYL+L+ +     N L  ++   E+ 
Sbjct: 178 KASQTGRDAEIYLAALVIYLALTTIFTTIFNWLEKRLGKYEQH 220



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L   V T  L    +    I G +    R+S  KL+ +I   YV +FR  P L+ 
Sbjct: 9   YFPVLLKASVVTIELTAIAVTIGLIFGLVAALFRISKIKLLNYIGSFYVWLFRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLP 157
           IFF+Y  +  ++P
Sbjct: 69  IFFIYYGLPKIVP 81


>gi|329116786|ref|ZP_08245503.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907191|gb|EGE54105.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 522

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 6/182 (3%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS------PEFMSLY 270
           +  P+       I      VL+ +  ++    P++ Q   I   T           ++  
Sbjct: 324 RTAPIAKNKALAILQKIFSVLLNIYIEIFRGTPMIVQAMVIYYGTAQAFGISLDRTLAAI 383

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             +S  T A++ EIVR G+++V  GQ EAA ALG TH +  R +++PQ MR+I+P   ++
Sbjct: 384 FIVSINTGAYMTEIVRGGILSVDNGQFEAATALGFTHGQTMRKIVIPQVMRNILPATGNE 443

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +   +L   G T+  Q  Q  +   +   IY  L+  +   +  +  
Sbjct: 444 FVINIKDTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIAVIYFILTFTVTRILRYIER 503

Query: 391 KI 392
           + 
Sbjct: 504 RF 505


>gi|146296045|ref|YP_001179816.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145409621|gb|ABP66625.1| amino acid ABC transporter membrane protein, PAAT family
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 220

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 12/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   +  +G+V  L A  L R    K    +   Y+  F   G P L+ I   Y  
Sbjct: 19  VTIELTAIAVTIGLVFGLIA-ALFRISKLKILNLIGSFYVWLF--RGTPLLLQIFFIYY- 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I  +   P F++  IAL   + A+ AEI+R+ ++++ +GQ EAA ALG
Sbjct: 75  --------GLPKIIPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDKGQYEAAKALG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+       +QTG+  
Sbjct: 127 MTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQLKASQTGRDA 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI +  + IYL+L+ + +   N L  ++   E
Sbjct: 187 EIYIAALIIYLALTTVFSTIFNWLEKRLGRYE 218



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 34/73 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L   V T  L    +    + G +    R+S  K++  I   YV +FR  P L+ 
Sbjct: 9   YFPVLLKASVVTIELTAIAVTIGLVFGLIAALFRISKLKILNLIGSFYVWLFRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLP 157
           IFF+Y  +  ++P
Sbjct: 69  IFFIYYGLPKIIP 81


>gi|319937507|ref|ZP_08011912.1| hypothetical protein HMPREF9488_02748 [Coprobacillus sp. 29_1]
 gi|319807347|gb|EFW03956.1| hypothetical protein HMPREF9488_02748 [Coprobacillus sp. 29_1]
          Length = 226

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 7/227 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL    L F       +  +   +  LG++L       ++    K  + L  +Y+   +I
Sbjct: 7   FLTQDNLIFMLQGAGLSLLLAAIAVCLGLILGTLGAA-AKLSKYKILRILGNVYVE--VI 63

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ I   Y      P++ Q +  G    +  F+   IALS  + A+  E++RSG+
Sbjct: 64  RGTPMLLQILFFY---LAVPLIIQ-SITGERFNADPFICGLIALSINSGAYSTELIRSGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             V +GQ EA   +G+ + +  R V+LPQA + I+PP+ S+++ L+K+SSL   +G ++L
Sbjct: 120 QGVDKGQWEACETIGMNYIQTMRHVILPQAFKRIVPPIVSEFITLIKDSSLISCIGVSEL 179

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     +       +  ++    +YL++++ ++ F  RL  K+A  +
Sbjct: 180 LLRTQVMGANYSNYLVPLVTAGCMYLAMTLTVSYFARRLERKLAASD 226



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 36/82 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  LA   +    I+GTL  A +LS  K++  +  VYVEV R  P L+ I F 
Sbjct: 16  MLQGAGLSLLLAAIAVCLGLILGTLGAAAKLSKYKILRILGNVYVEVIRGTPMLLQILFF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
           Y +V  ++              
Sbjct: 76  YLAVPLIIQSITGERFNADPFI 97


>gi|302549236|ref|ZP_07301578.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
 gi|302466854|gb|EFL29947.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
          Length = 339

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 65/269 (24%), Positives = 117/269 (43%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   V +      V SV+        +  G F +   L    LT+     + V  F+L
Sbjct: 51  RLLSAAVALLLFAMVVNSVVRNRAFQWDVVGGYFTSAAVLDGLLLTLWLTGLVMVLGFLL 110

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKP 249
           GI L++      R         L   ++  F     P LV +   +        L    P
Sbjct: 111 GIPLAVM-----RLSANPVLSTLSWGFVWIF--RSTPLLVQLLFWFNIGALYPTLGLGIP 163

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              QF  +    +    ++  I L+ + AA+ AE+VR G+++V  GQ EAA ALG+   +
Sbjct: 164 FGPQFVTVKTVNLLGPALTAVIGLTLHEAAYAAEVVRGGILSVDSGQTEAAQALGIGRAR 223

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQAMRSI+P   +  +  LK +S+   +   DL+     + NQT Q I ++++
Sbjct: 224 TLRRIVVPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLLVV 283

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y++++ ++++    +    A    +
Sbjct: 284 ATLWYIAVTTVLSVGQFYVERHYARGAAR 312



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           M+   ++G  +   RLSAN +++ +   +V +FR+ P LV + F +   
Sbjct: 104 MVLGFLLGIPLAVMRLSANPVLSTLSWGFVWIFRSTPLLVQLLFWFNIG 152


>gi|300791008|ref|YP_003771299.1| polar amino acid ABC transporter permease [Amycolatopsis
           mediterranei U32]
 gi|299800522|gb|ADJ50897.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 315

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 125/269 (46%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  ++++F  +  V SV+        +      ++R L     T+       +   V 
Sbjct: 33  RWVAGVIILFLAFIVVRSVVTNSALQWPVVGDFLFDDRILRGLQNTLILTVISMLIGIVG 92

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DKP 249
           GI+L++      R            +YI  F   G P +  + +   L           P
Sbjct: 93  GILLAVM-----RLSPNPLTSGAAAIYIWLF--RGTPLITQLIIWNFLGLAYSRIGLGIP 145

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F     + +  +F +  + L    AA++AEIVR G+ +V  GQ+EAA ALG++  +
Sbjct: 146 FGPTFVSWDTNLLITQFTASLLGLGLNEAAYMAEIVRGGIQSVDSGQLEAASALGMSRTR 205

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQAMR IIPP  ++ +++LK +SL VA+G+ +L+    TI +Q  + + ++++
Sbjct: 206 TLRRIILPQAMRVIIPPTGNETISMLKTTSLVVAIGYFELMVAAQTIYSQNLKTVPLLIV 265

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++ +   ++  + +    +
Sbjct: 266 AALWYLFMTSVLTVIQIQIEKRFSRGTSR 294



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 40/113 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G  NT  L    M+   + G L+   RLS N L +    +Y+ +FR  P +  +   
Sbjct: 71  ILRGLQNTLILTVISMLIGIVGGILLAVMRLSPNPLTSGAAAIYIWLFRGTPLITQLIIW 130

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
               L+   I       P  +  +   L            +   +++  IV  
Sbjct: 131 NFLGLAYSRIGLGIPFGPTFVSWDTNLLITQFTASLLGLGLNEAAYMAEIVRG 183


>gi|288934567|ref|YP_003438626.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288889276|gb|ADC57594.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 222

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG VL+L      R       K L  
Sbjct: 2   QESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFVLALM-----RMSPLWPVKWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  MYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAIASIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQER 219



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R+Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPLWPVKWLARMYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPAAMIGLSLN 98


>gi|222529919|ref|YP_002573801.1| polar amino acid ABC transporter inner membrane subunit
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222456766|gb|ACM61028.1| polar amino acid ABC transporter, inner membrane subunit
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 220

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++  A       V G+V +LF     R    K    +   Y+  F   G P L
Sbjct: 14  LKASVVTIELTAIAVTIGLVFGLVAALF-----RISKIKLLNYIGSFYVWLF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I   Y              I  +   P F++  IAL   + A+ AEI+R+ ++++ RG
Sbjct: 67  LQIFFIYY---------GLPKIIPALTLPAFLAGAIALIINSGAYTAEIIRAAILSIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+T+ +  R V++PQ  + +IPP+ ++++ LLK+SSL   +G  +L+     
Sbjct: 118 QYEAAKALGMTYLQTMRYVIVPQTYKRLIPPIGNEFIALLKDSSLVSTIGMVELMRAAQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             + TG+  EI +  + IYL+L+ + +   N L  ++   E++
Sbjct: 178 KASATGRDAEIYIAALVIYLALTTVFSTIFNWLEKRLGKYEQR 220



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L   V T  L    +    + G +    R+S  KL+ +I   YV +FR  P L+ 
Sbjct: 9   YFPVLLKASVVTIELTAIAVTIGLVFGLVAALFRISKIKLLNYIGSFYVWLFRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLP 157
           IFF+Y  +  ++P
Sbjct: 69  IFFIYYGLPKIIP 81


>gi|170759870|ref|YP_001787408.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169406859|gb|ACA55270.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 228

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 5/232 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               FL+     F +    T    F F+ V+G +L L  + +      K  K + + YI 
Sbjct: 1   MDFSFLSKYYSFFTSGAKYTIILAF-FTVVIGTILGLLLSLMK-LSKNKILKYIAVSYIE 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G P LV + + Y       +      I GS   P+F +  +ALS  + A++AEI+
Sbjct: 59  F--IRGTPVLVQLYIIYYGLPTIGIRFPEVPILGSNF-PDFFAGILALSINSGAYVAEII 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++ ++K SS+   +G
Sbjct: 116 RAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIKESSIVSIIG 175

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L+    T+     +  E +L+   +Y  L+  ++  +     ++ + ++
Sbjct: 176 IHELMYNADTVRGNIFRPFEPLLVAAVMYFILTFTLSKLLGVAERRMRVSDR 227



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 44/89 (49%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  S Y +    G   T  LAF  ++  TI+G L+   +LS NK++ +I   Y+E  
Sbjct: 1   MDFSFLSKYYSFFTSGAKYTIILAFFTVVIGTILGLLLSLMKLSKNKILKYIAVSYIEFI 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           R  P LV ++ +Y  + ++        +L
Sbjct: 61  RGTPVLVQLYIIYYGLPTIGIRFPEVPIL 89


>gi|152970960|ref|YP_001336069.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238895476|ref|YP_002920211.1| putative amino-acid ABC transport system permease component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|262043450|ref|ZP_06016573.1| L-cystine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|330000993|ref|ZP_08303864.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955809|gb|ABR77839.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238547793|dbj|BAH64144.1| putative amino-acid ABC transport system permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259039192|gb|EEW40340.1| L-cystine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|328537828|gb|EGF64022.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 222

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG +L+L      R       K L  
Sbjct: 2   QESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALM-----RMSPVWPVKWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  MYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAIASIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQER 219



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R+Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPVWPVKWLARMYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPAAMIGLSLN 98


>gi|319650477|ref|ZP_08004617.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317397658|gb|EFV78356.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 233

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 104/207 (50%), Gaps = 14/207 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF+ G+ L++F T L+R    K  + +  +Y+S   I G P LV + + +      
Sbjct: 38  LTLISFIFGLALAIF-TALARISGNKALETIAGIYVSA--IRGTPLLVQLFIIFY----- 89

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                        +   F S  I  S    A+ +EI+R+ ++++P+GQ EA  ++G+++ 
Sbjct: 90  ------GLPTIGVIIDPFPSAIIGFSLNVGAYSSEIIRAAILSIPKGQWEAGYSIGMSYS 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + + +  
Sbjct: 144 QTLKRIILPQASRVSIPPLSNSFISLVKDTSLASMILVTEMFRRAQEIAATNYEFLLLYT 203

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
              FIY  +  M+++   RL  ++   
Sbjct: 204 QAAFIYWVICFMLSILQGRLERRLDRY 230



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 31/80 (38%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V T  L     I    +       R+S NK +  I  +YV   R  P LV +F ++  +
Sbjct: 32  IVYTIPLTLISFIFGLALAIFTALARISGNKALETIAGIYVSAIRGTPLLVQLFIIFYGL 91

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++  I D       G  LN
Sbjct: 92  PTIGVIIDPFPSAIIGFSLN 111


>gi|162448094|ref|YP_001621226.1| ABC transporter substrate-binding and permease [Acholeplasma
           laidlawii PG-8A]
 gi|161986201|gb|ABX81850.1| ABC-type transport system, substrate-binding and permease component
           [Acholeplasma laidlawii PG-8A]
          Length = 512

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 19/222 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLS--------RHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 +  F+L ++L    T++         R   ++    +  +YI  F   G P +V
Sbjct: 300 LAIIGTLGGFILSLILVWLKTQIVDKKRDGFIRILFKRLTSGIATIYIVLF--RGTPMIV 357

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              + Y              I   +      +  I +   TAA+IAEI+R  + A+ +GQ
Sbjct: 358 QAMIFYY---------GVKLIFDLSWWTPLSAGLIIVVLNTAAYIAEILRGSMNAIDKGQ 408

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           MEAA +LG +  K+   ++ PQA+++ +P + ++++  LK++++   +G  DL +    +
Sbjct: 409 MEAARSLGFSRVKSLLYIVYPQAIKNALPAIGNEFIVNLKDTAVLSVIGVLDLFNATRQV 468

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  T   +   +I   IYL L+ + +L +N L  + A KE K
Sbjct: 469 VGATYDTVTPFVITAIIYLVLTGVTSLAVNYLENRQAGKEVK 510



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 13/98 (13%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV-------------GAGRLSANKLV 125
           +     Y +  + G   T  LA  G +   I+  ++             G  R+   +L 
Sbjct: 280 FDLIGKYVSLFIQGVGVTLLLAIIGTLGGFILSLILVWLKTQIVDKKRDGFIRILFKRLT 339

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           + I  +Y+ +FR  P +V     Y  V  +  +   + 
Sbjct: 340 SGIATIYIVLFRGTPMIVQAMIFYYGVKLIFDLSWWTP 377


>gi|108803349|ref|YP_643286.1| amino acid ABC transporter permease [Rubrobacter xylanophilus DSM
           9941]
 gi|108764592|gb|ABG03474.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rubrobacter xylanophilus DSM
           9941]
          Length = 242

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   + V+GIVL LF   L +    +       +YI  F   G P LV I + Y  
Sbjct: 43  VTLSLAALAEVVGIVLGLFL-ALLKISRSRLLSLPAQVYIDVF--RGTPLLVQITIIYFT 99

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G   +  F +   ALS  +AA++AEI R+G+ ++ +GQMEA  A G
Sbjct: 100 TAAV----------GIRFTSLFFAGLTALSLNSAAYVAEIFRAGIQSIDKGQMEAGRASG 149

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L++ +  R +++PQA R +IPPLT++++ L+K++SL   +G A+L+     + + T    
Sbjct: 150 LSYAQTMRYIIVPQAFRRVIPPLTNEFVTLIKDTSLVSVIGLAELLRAARVLQSATFNGT 209

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++    IYL++ + +    N L  ++  +
Sbjct: 210 P-LIAAALIYLAVCLPLIYLTNILERRLNRR 239



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 67/197 (34%), Gaps = 2/197 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA    +   ++G  +   ++S ++L++   +VY++VFR  P LV I  +
Sbjct: 37  LLKGLAVTLSLAALAEVVGIVLGLFLALLKISRSRLLSLPAQVYIDVFRGTPLLVQITII 96

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y +  +V                 N       +       I       G    L   +  
Sbjct: 97  YFTTAAVGIRFTSLFFAGLTALSLNSAAYVAEIFRAGIQSIDKGQMEAGRASGLSYAQTM 156

Query: 209 RHFHEK--TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           R+        + +P L      +    +LV +    +L     VL    F G   ++   
Sbjct: 157 RYIIVPQAFRRVIPPLTNEFVTLIKDTSLVSVIGLAELLRAARVLQSATFNGTPLIAAAL 216

Query: 267 MSLYIALSCYTAAFIAE 283
           + L + L       I E
Sbjct: 217 IYLAVCLPLIYLTNILE 233


>gi|296132710|ref|YP_003639957.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola sp. JR]
 gi|296031288|gb|ADG82056.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola potens JR]
          Length = 225

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
               + + T  ++ V S  +G VL L  + L R    K    L  +Y+  F   G P LV
Sbjct: 17  MMLKIGVKTTIQLTVISVSIGTVLGLIFSIL-RLSKFKILSFLSAVYVDFF--RGTPLLV 73

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I            +  F  +      P  +S  +ALS  + A+IAEI R+G+ ++ RGQ
Sbjct: 74  QIL-----------MFHFAIMPAIGRFPSIVSGLVALSLNSGAYIAEIFRAGIQSIDRGQ 122

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           MEAA +LG+T+ +A R +++PQA + ++P L ++++ +LK+SSL   +   +L   G  I
Sbjct: 123 MEAARSLGMTYGQAMRYIIVPQAFKRVLPALGNEFIAMLKDSSLVSVIAVQELAMTGSLI 182

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T +  E  +    +YL L+++++ F+  L  +    + +
Sbjct: 183 SGRTARPFEAWIPVAILYLILTMVLSRFVAYLERRFGKSDTR 224



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 75  GIVPYTSDSSYATAIL-VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           GI+ +   + Y   +L +G   T  L    +   T++G +    RLS  K+++++  VYV
Sbjct: 4   GIIRFDIIAEYLPMMLKIGVKTTIQLTVISVSIGTVLGLIFSILRLSKFKILSFLSAVYV 63

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           + FR  P LV I   + +++  +      +     + LN
Sbjct: 64  DFFRGTPLLVQILMFHFAIMPAIGRFPSIVSGLVALSLN 102


>gi|33601620|ref|NP_889180.1| glutamine transport system permease [Bordetella bronchiseptica
           RB50]
 gi|33576057|emb|CAE33136.1| glutamine transport system permease [Bordetella bronchiseptica
           RB50]
          Length = 222

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 13/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   + +LG V+ L       +   +    L  +Y+  F   G P LV + + +  
Sbjct: 21  VTVEVTACALLLGCVIGLLVGVGRLNPQRRFIYNLCSVYLLFF--RGTPLLVQLFIWF-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P F    + L  Y+ A+++EIVR  + +V RGQMEAA +LG
Sbjct: 77  ---------FGLPQFGITLPAFACGVLGLGIYSGAYVSEIVRGAIQSVDRGQMEAARSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A R+++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++
Sbjct: 128 MSSAQAMRIIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E  L+   IYL L+      + R+  ++ 
Sbjct: 188 ETYLVVALIYLVLTTATTTILRRIEHRLR 216



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 1/98 (1%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVE 134
           ++ +    +   A+L G V T  +    ++   +IG LVG GRL+   + +  +C VY+ 
Sbjct: 2   MLDFAPVFADFDALLRGAVVTVEVTACALLLGCVIGLLVGVGRLNPQRRFIYNLCSVYLL 61

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            FR  P LV +F  +  +               G+ + 
Sbjct: 62  FFRGTPLLVQLFIWFFGLPQFGITLPAFACGVLGLGIY 99


>gi|139437313|ref|ZP_01771473.1| Hypothetical protein COLAER_00452 [Collinsella aerofaciens ATCC
           25986]
 gi|133776960|gb|EBA40780.1| Hypothetical protein COLAER_00452 [Collinsella aerofaciens ATCC
           25986]
          Length = 436

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 124/255 (48%), Gaps = 20/255 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFG-MFLNN----RGLSFPTLTMDTNAKIFVFSFVLG 197
           V  F  + + L   P  +      F  +FLN     + L         +  I + +F L 
Sbjct: 168 VTAFDNFLADLKEQPWVEAWNSNMFLRLFLNPVILVQSLPIVFKGFLMSLSIVLVAFPLA 227

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I    FA  L R    +  + L  +Y++  +I G P  + I + +   F  P+       
Sbjct: 228 IPFG-FALSLMRISKSRILRCLAGIYVN--IIRGTPAFLQIYIAF---FGLPL------- 274

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  +++   I ++  ++A++ EI R+G+ ++P+GQ EAA +LG+   +    V++P
Sbjct: 275 -AGVKVDDYVLGVIVMAMNSSAYLCEIFRAGIQSIPKGQNEAARSLGMNAFQTLLYVMIP 333

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q  R+++P LTS+++ L K++SL  AVG  ++V    TI+  TG +I   ++    YL +
Sbjct: 334 QTFRNVLPTLTSEFILLYKDTSLLAAVGVVEIVMNARTIVATTG-SITPYVVAALFYLVI 392

Query: 378 SIMIALFMNRLNAKI 392
           ++ +A  ++ L A++
Sbjct: 393 TLPLARLVSGLEARL 407



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 27/66 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             GF+ +  +       A   G  +   R+S ++++  +  +YV + R  P  + I+  +
Sbjct: 210 FKGFLMSLSIVLVAFPLAIPFGFALSLMRISKSRILRCLAGIYVNIIRGTPAFLQIYIAF 269

Query: 150 KSVLSV 155
             +   
Sbjct: 270 FGLPLA 275


>gi|294786680|ref|ZP_06751934.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Parascardovia denticolens F0305]
 gi|315226290|ref|ZP_07868078.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Parascardovia denticolens DSM 10105]
 gi|294485513|gb|EFG33147.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Parascardovia denticolens F0305]
 gi|315120422|gb|EFT83554.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Parascardovia denticolens DSM 10105]
          Length = 324

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 11/264 (4%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            I  ++V       +  V+  P+    + +    N   L+    T+      F  + VL 
Sbjct: 37  WIAAIIVGILAAMLIHGVVTNPNFQWKVVWLYLFNEHVLTGVGWTLLLTVGSFAIATVLS 96

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQL----HFDKPVLG 252
           ++L++      R       + +   +I  F    + T LV   L   L        P   
Sbjct: 97  VILAIM-----RQSQNLVLRGVSWFFIWFFRGTPVYTQLVFWGLIAVLVPKISLGIPFGP 151

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F  +    +    ++  + L+   AA+++EIVR+GL +V  GQ EA+ ALG++  +  R
Sbjct: 152 SFVSLSTQDIFTAGVAALVGLALNEAAYLSEIVRAGLESVDPGQREASQALGMSRGQIMR 211

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR I+PP++++ + LLK +SL +AV F  +L  V  +I N+  + I ++L+  
Sbjct: 212 RIVLPQAMRIIVPPMSNEAIGLLKTTSLVLAVPFTMELQFVTNSIANRIYKPIPLLLVAA 271

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
             YL ++ ++ +    L       
Sbjct: 272 IWYLVITSILMVGQTYLERYFGRG 295



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L       AT++  ++   R S N ++  +   ++  FR  P    + F  
Sbjct: 75  LTGVGWTLLLTVGSFAIATVLSVILAIMRQSQNLVLRGVSWFFIWFFRGTPVYTQLVFWG 134

Query: 150 KSVLSVLP 157
              + V  
Sbjct: 135 LIAVLVPK 142


>gi|317047450|ref|YP_004115098.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949067|gb|ADU68542.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 290

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 112/247 (45%), Gaps = 9/247 (3%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           +     +         F     L     T+  +     F  + G++ ++           
Sbjct: 49  NAFAHGNIEWSFVGQFFTAKAILDGVVNTLIMSVLAMGFGVLFGVITAIMYM-----SPN 103

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTVSPEFMSLYI 271
                + + Y   F   G P ++ + L + L    P +       +   TV   F++  +
Sbjct: 104 PVLHYIAVGYAWIF--RGTPLILQLLLWFNLALVFPTISIPGVFSVQTVTVMTPFLAALL 161

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS    A+ +E+VR+GL++V  GQ EAA A+G+   +A + ++LPQAMR I+PP+ +++
Sbjct: 162 GLSINQGAYTSEVVRAGLLSVDTGQYEAAKAIGMPRLQALQRIILPQAMRVILPPVGNEF 221

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++++K +SLA  + +++L+     I     + +E++ +    YL +  +++   ++L   
Sbjct: 222 ISMIKTTSLASMIQYSELLYNTQNIYFANARVMELLFVAGIWYLIVVTVLSFGQSQLERY 281

Query: 392 IALKEKK 398
            +   ++
Sbjct: 282 FSRGHRR 288



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A AIL G VNT  ++   M    + G +     +S N ++ +I   Y  +FR  P ++ +
Sbjct: 67  AKAILDGVVNTLIMSVLAMGFGVLFGVITAIMYMSPNPVLHYIAVGYAWIFRGTPLILQL 126

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 127 LLWFNLAL 134


>gi|269926020|ref|YP_003322643.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269789680|gb|ACZ41821.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobaculum terrenum ATCC BAA-798]
          Length = 246

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 9/233 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     +F             +    + V S +LGI+L L A  L R  H +      + 
Sbjct: 1   MNFDPAIFWEYLFHPSIVRGAELTIFLSVVSQLLGILLGLVA-ALGRISHSRIPVFRWIS 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               +L  G P LV I   Y   F  P L          V PE  S  IALS    A++A
Sbjct: 60  GFYIWLFRGTPLLVQIIFVY---FAIPQLTN-----QRVVIPEVPSAIIALSLNEGAYMA 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+++V  GQMEAA++LG+T   A R ++LPQA+R IIPP  ++++++LKN+SL  
Sbjct: 112 EIIRAGILSVEGGQMEAALSLGMTRWLAMRRIILPQAIRIIIPPTGNEFISMLKNTSLVA 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   +L+     I + T +  E++ I    YL+++ + +    +L  +    
Sbjct: 172 VISAHELLFATQEIYSATFRYFELLTIASLWYLAMTTVASYLQGKLERRFERG 224



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 2/148 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGR--LSANKLVAWICRVYVEVFRNIPPLVVIF 146
           I+ G   T +L+    +   ++G +   GR   S   +  WI   Y+ +FR  P LV I 
Sbjct: 17  IVRGAELTIFLSVVSQLLGILLGLVAALGRISHSRIPVFRWISGFYIWLFRGTPLLVQII 76

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F+Y ++  +         +P  +   +         +     + V    +   LSL  TR
Sbjct: 77  FVYFAIPQLTNQRVVIPEVPSAIIALSLNEGAYMAEIIRAGILSVEGGQMEAALSLGMTR 136

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPT 234
                     +A+ ++   T   F    
Sbjct: 137 WLAMRRIILPQAIRIIIPPTGNEFISML 164


>gi|170757509|ref|YP_001781580.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|169122721|gb|ACA46557.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
          Length = 228

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 5/232 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               FL+     F +    T    F F+ V+G +L L  + +      K  K + + YI 
Sbjct: 1   MDFSFLSKYYSFFTSGAKYTIILAF-FTVVIGTILGLLLSLMK-LSKNKILKYIAVSYIE 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G P LV + + Y       +      I GS   P+F +  +ALS  + A++AEI+
Sbjct: 59  F--IRGTPVLVQLYIIYYGLPTIGIRFPEVPILGSNF-PDFFAGILALSINSGAYVAEII 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++ ++K SS+   +G
Sbjct: 116 RAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFITIIKESSIVSIIG 175

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L+    T+     +  E +L+   +Y  L+  ++  +     ++ + ++
Sbjct: 176 IHELMYNADTVRGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSDR 227



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 44/89 (49%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  S Y +    G   T  LAF  ++  TI+G L+   +LS NK++ +I   Y+E  
Sbjct: 1   MDFSFLSKYYSFFTSGAKYTIILAFFTVVIGTILGLLLSLMKLSKNKILKYIAVSYIEFI 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           R  P LV ++ +Y  + ++        +L
Sbjct: 61  RGTPVLVQLYIIYYGLPTIGIRFPEVPIL 89


>gi|147678666|ref|YP_001212881.1| ABC-type amino acid transport/signal transduction system
           [Pelotomaculum thermopropionicum SI]
 gi|146274763|dbj|BAF60512.1| ABC-type amino acid transport/signal transduction system
           [Pelotomaculum thermopropionicum SI]
          Length = 762

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 17/267 (6%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            F+ +   +                   +      F NN  L    L +    K+ V   
Sbjct: 504 YFKTVVVALKANLAAYDGGGAAGGDISFLQKAGDSFYNNIILENRYLLILDGLKVTVLIS 563

Query: 195 VLGIVLSLFATRLS---RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           +L  V       L    R    K  +    +YIS  ++ G P LVL+ + + + F     
Sbjct: 564 ILSTVFGTLLGALICFMRMSPNKALRQPAKVYIS--ILRGTPVLVLLMIIFYVVF----- 616

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                   S      +   IA      A+++E+ R+G+ +V RGQ EA IA+G T  K  
Sbjct: 617 -------ASVNIDPVLVAVIAFGMNFGAYVSEMFRTGIESVDRGQTEAGIAMGFTRVKTF 669

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQA R+I+P    ++++L+K +S+   +   DL   G  I ++T  A   +++  
Sbjct: 670 LYIVLPQAARNILPVYKGEFISLVKMTSVVGYIAVQDLTKAGDIIRSRTFDAFFPLVMVA 729

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            +Y  +S +++L +  +      K ++
Sbjct: 730 VLYFFISWLLSLSLGYVEMVTDPKARR 756



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++    +  T++G L+   R+S NK +    +VY+ + R  P LV++  +
Sbjct: 552 ILDGLKVTVLISILSTVFGTLLGALICFMRMSPNKALRQPAKVYISILRGTPVLVLLMII 611

Query: 149 YKSVL-SVLPIPDHSIVLPFGM 169
           +  V  SV   P    V+ FGM
Sbjct: 612 FYVVFASVNIDPVLVAVIAFGM 633


>gi|312194702|ref|YP_004014763.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311226038|gb|ADP78893.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 329

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   VV+  +      ++        + +        L     T+       +   V 
Sbjct: 49  RWVTAAVVLLLVAMGAHGLVTNHRFRWDIVWKYLFTEPVLRGLWATVYLTFFAMLIGIVG 108

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKP 249
           G++L++      R         +  +Y   F   G P L+ +     +           P
Sbjct: 109 GVLLAIM-----RQSPNPLLSGVSWVYTWFF--RGTPVLLQLIFWGTIGALYPRIAVGIP 161

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              +F     + + P  ++  + L    AA++AE+VR+G+ AV  GQ+EAA ALG+    
Sbjct: 162 FGPEFASADSNKLIPLIVAGILGLGLNEAAYMAEVVRAGISAVDEGQIEAAQALGMGRGL 221

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQAM+ IIPP  ++ +++LK SSL   +   +L      I  +  Q I ++++
Sbjct: 222 TMRRIVLPQAMKVIIPPTGNETISMLKTSSLVSIIAVIELTYSVQLIYARNYQTIPLLIV 281

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL L+ ++++    L  +     ++
Sbjct: 282 AAIWYLVLTSVLSVGQYFLERRYDPAVRR 310



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 28/63 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T +L F  M+   + G L+   R S N L++ +  VY   FR  P L+ + F  
Sbjct: 88  LRGLWATVYLTFFAMLIGIVGGVLLAIMRQSPNPLLSGVSWVYTWFFRGTPVLLQLIFWG 147

Query: 150 KSV 152
              
Sbjct: 148 TIG 150


>gi|218548545|ref|YP_002382336.1| ABC transporter permease [Escherichia fergusonii ATCC 35469]
 gi|218356086|emb|CAQ88703.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia fergusonii ATCC 35469]
 gi|324113636|gb|EGC07611.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia fergusonii B253]
 gi|325496962|gb|EGC94821.1| transporter subunit: permease component of ABC superfamily
           transporter [Escherichia fergusonii ECD227]
          Length = 222

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG +L+L      R       + L   YIS F   G 
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFILALM-----RLSPVGPLRWLARFYISIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  + + Y        L QF             S  I LS  TAA+ AE +R+ + ++
Sbjct: 66  PLIAQLFMIYY------GLPQFG-----IELDPVPSAMIGLSLNTAAYAAETLRAAISSI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 175 AQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNYFENQLNRQERE 220



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   RLS    + W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFILALMRLSPVGPLRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +       D       G+ LN
Sbjct: 74  IYYGLPQFGIELDPVPSAMIGLSLN 98


>gi|193066391|ref|ZP_03047439.1| L-cystine ABC transporter, permease protein [Escherichia coli E22]
 gi|194429920|ref|ZP_03062430.1| L-cystine ABC transporter, permease protein [Escherichia coli B171]
 gi|260844322|ref|YP_003222100.1| putative transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|192925976|gb|EDV80622.1| L-cystine ABC transporter, permease protein [Escherichia coli E22]
 gi|194412009|gb|EDX28321.1| L-cystine ABC transporter, permease protein [Escherichia coli B171]
 gi|257759469|dbj|BAI30966.1| predicted transporter subunit [Escherichia coli O103:H2 str. 12009]
 gi|323158598|gb|EFZ44612.1| L-cystine transport system permease protein tcyB [Escherichia coli
           E128010]
          Length = 222

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAEYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAEYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|289450156|ref|YP_003475673.1| ABC transporter ATP-binding protein [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184703|gb|ADC91128.1| ABC transporter, ATP-binding protein [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 580

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 100/241 (41%), Gaps = 19/241 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF-------ATRLSRHFHEKT 215
            ++          L+   LT+  +        ++G+ + L             +   ++ 
Sbjct: 12  WIIWIIRSSYRSILNGILLTLVVSLVATFIGCLIGLAVGLLQTWPESSREAWLKRGFKRL 71

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            K +   Y+  F   G P +V  A  Y           FN+           +    +S 
Sbjct: 72  LKFILKAYVEIF--RGTPMMVQAAFIYYGAALL-----FNWHMNLIF-----AAIFIVSI 119

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A++AE VR G++++  GQ E A ALGL H +  R ++LPQA+R+I+P + +  +  +
Sbjct: 120 NTGAYMAETVRGGVMSIDPGQTEGAKALGLNHYRTMRSIILPQAIRNIMPQIGNNLIINI 179

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K++ +   +G  +L     +I   T        + M IY +++   +  +  L  ++A +
Sbjct: 180 KDTCVLSIIGVMELFYTMKSISGATYAFFPTFTVAMVIYFAITFTCSRLLLCLEHRLAGE 239

Query: 396 E 396
           E
Sbjct: 240 E 240



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 14/108 (12%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-- 121
           ++  A  +   G + +   SSY  +IL G + T  ++        +IG  VG  +     
Sbjct: 1   MNIPASTDFG-GWIIWIIRSSY-RSILNGILLTLVVSLVATFIGCLIGLAVGLLQTWPES 58

Query: 122 ----------NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
                      +L+ +I + YVE+FR  P +V   F+Y     +    
Sbjct: 59  SREAWLKRGFKRLLKFILKAYVEIFRGTPMMVQAAFIYYGAALLFNWH 106


>gi|271966004|ref|YP_003340200.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
 gi|270509179|gb|ACZ87457.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
          Length = 304

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 10/240 (4%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +  L +G              +    +I V +  LG+VL +    + R  H      L 
Sbjct: 46  ANPNLDWGKVAEYVFHERILSGVWVTIEISVLATALGLVLGVLV-AIMRLAHNPVLSGLA 104

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ---FNFIGGST----VSPEFMSLYIAL 273
             YI  F   G P LV +   Y L F  P L     F  IG       V   F S  + L
Sbjct: 105 TFYIWFF--RGTPVLVQLIFWYNLAFLFPELVLKVPFTMIGVKWDTNQVMTGFTSAMLGL 162

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
               AA+ AE VR+G+ AV +GQ EAA ALG+T  K  R+++LPQA+R IIPP  +++++
Sbjct: 163 GLNLAAYFAETVRAGIQAVDKGQTEAAYALGMTPAKRMRVIVLPQALRIIIPPTGNEFIS 222

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +LK +SL   V   DL++    I       +E++++    Y+ ++ +      RL  +  
Sbjct: 223 MLKTTSLVYVVAGHDLMTNASQIYKANNLIMELLIVASLWYMLMTAVATFLQGRLERRFG 282



 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++        ++G LV   RL+ N +++ +   Y+  FR  P LV + F 
Sbjct: 64  ILSGVWVTIEISVLATALGLVLGVLVAIMRLAHNPVLSGLATFYIWFFRGTPVLVQLIFW 123

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y        +         G+  +   +     +      + + ++    V +
Sbjct: 124 YNLAFLFPELVLKVPFTMIGVKWDTNQVMTGFTSAMLGLGLNLAAYFAETVRA 176


>gi|15802353|ref|NP_288379.1| putative transport system permease protein (former yecC)
           [Escherichia coli O157:H7 EDL933]
 gi|15831910|ref|NP_310683.1| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|168751844|ref|ZP_02776866.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168758229|ref|ZP_02783236.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168764460|ref|ZP_02789467.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168771522|ref|ZP_02796529.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168777342|ref|ZP_02802349.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168783312|ref|ZP_02808319.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168790326|ref|ZP_02815333.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168802262|ref|ZP_02827269.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|195939222|ref|ZP_03084604.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208810409|ref|ZP_03252285.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816908|ref|ZP_03258028.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208819783|ref|ZP_03260103.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209397535|ref|YP_002271032.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217328790|ref|ZP_03444871.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254793568|ref|YP_003078405.1| putative ABC transporter membrane protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261227587|ref|ZP_05941868.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255817|ref|ZP_05948350.1| predicted transporter subunit: membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291283095|ref|YP_003499913.1| putative transport system permease protein [Escherichia coli O55:H7
           str. CB9615]
 gi|12516016|gb|AAG56933.1|AE005414_10 putative transport system permease protein (former yecC)
           [Escherichia coli O157:H7 str. EDL933]
 gi|13362124|dbj|BAB36079.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187767392|gb|EDU31236.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014175|gb|EDU52297.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188999304|gb|EDU68290.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189354909|gb|EDU73328.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189359723|gb|EDU78142.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189365552|gb|EDU83968.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189370189|gb|EDU88605.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189375708|gb|EDU94124.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|208724925|gb|EDZ74632.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208731251|gb|EDZ79940.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208739906|gb|EDZ87588.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209158935|gb|ACI36368.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209767008|gb|ACI81816.1| putative transport system permease protein [Escherichia coli]
 gi|209767010|gb|ACI81817.1| putative transport system permease protein [Escherichia coli]
 gi|209767012|gb|ACI81818.1| putative transport system permease protein [Escherichia coli]
 gi|209767014|gb|ACI81819.1| putative transport system permease protein [Escherichia coli]
 gi|209767016|gb|ACI81820.1| putative transport system permease protein [Escherichia coli]
 gi|217318137|gb|EEC26564.1| L-cystine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254592968|gb|ACT72329.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290762968|gb|ADD56929.1| putative transport system permease protein [Escherichia coli O55:H7
           str. CB9615]
 gi|320191893|gb|EFW66540.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320641766|gb|EFX11154.1| amino acid ABC transporter permease [Escherichia coli O157:H7 str.
           G5101]
 gi|320647126|gb|EFX15959.1| amino acid ABC transporter permease [Escherichia coli O157:H- str.
           493-89]
 gi|320652409|gb|EFX20707.1| amino acid ABC transporter permease [Escherichia coli O157:H- str.
           H 2687]
 gi|320658011|gb|EFX25773.1| amino acid ABC transporter permease [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658583|gb|EFX26277.1| amino acid ABC transporter permease [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668481|gb|EFX35308.1| amino acid ABC transporter permease [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326342326|gb|EGD66107.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7
           str. 1044]
 gi|326344833|gb|EGD68580.1| Cystine ABC transporter, permease protein [Escherichia coli O157:H7
           str. 1125]
          Length = 222

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|170769381|ref|ZP_02903834.1| L-cystine ABC transporter, permease protein [Escherichia albertii
           TW07627]
 gi|170121705|gb|EDS90636.1| L-cystine ABC transporter, permease protein [Escherichia albertii
           TW07627]
          Length = 222

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPVWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPVWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|257784235|ref|YP_003179452.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
 gi|257472742|gb|ACV50861.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
          Length = 449

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 119/264 (45%), Gaps = 15/264 (5%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           + V  N P   ++ +L           +H + +     L    +            I + 
Sbjct: 181 ITVISNTPVQAIVNWLDVQPWVEAWNSNHFLGMFLKPQLIVSSVVMLFPGWLVCLAIVIC 240

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           ++ + IVL      L +       +AL ++YI+  L+ G P  + I   Y L F  P+L 
Sbjct: 241 AYPVAIVLG-MGFALLKISKNPLLRALAVVYIN--LLRGTPFFLQI---YILFFGLPMLN 294

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                         +  +I ++  ++A+++EI R+G+ ++P+GQ EAA +LG+   +   
Sbjct: 295 --------INLDTNLLGFIVVAINSSAYLSEIFRAGIQSIPQGQYEAASSLGMNRFQTMT 346

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +++PQ +R +IPPLTS ++   K++SL  +VG  +L+     +   TG  +   +    
Sbjct: 347 FIIIPQTIRRVIPPLTSDFITSYKDTSLLSSVGVMELMMFAKNLTTSTGN-MTPYMTAAL 405

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
            YL++++ +   +  +  ++   E
Sbjct: 406 FYLAITLPLIKVVGSIEKRMEQSE 429



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 29/70 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G++    +       A ++G      ++S N L+  +  VY+ + R  P  + I+ L
Sbjct: 227 LFPGWLVCLAIVICAYPVAIVLGMGFALLKISKNPLLRALAVVYINLLRGTPFFLQIYIL 286

Query: 149 YKSVLSVLPI 158
           +  +  +   
Sbjct: 287 FFGLPMLNIN 296


>gi|237808616|ref|YP_002893056.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500877|gb|ACQ93470.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 520

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +        +F N        L ++ +   ++   V G+VL+L     ++  H +    
Sbjct: 1   MEFDWPYLLSLFQNQDFWDASLLVVELSVATWLGGIVFGMVLAL-----AKQSHYRPLSW 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   YI  F    LP LVLI   Y +        QF       +S  F +  +A+    +
Sbjct: 56  LAGSYIWLF--RSLPLLVLIIFIYNVP-------QFVPSSSDLLSSPFTAGLLAMILSES 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI R GL++V RGQ EA  ALG+      RL+++PQA +  +P L ++++ ++K +
Sbjct: 107 AYIAEIHRGGLLSVHRGQTEAGRALGMRFIGIQRLIIIPQAFKIALPSLANEFVTIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q  + +E +L     Y+ +  +    +  L     + ++
Sbjct: 167 SLVSVISLAEILMVGQRLYTQNFKVMETLLAVACYYVLIVTVFDRLIVWLEHHFDVNKR 225



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+    +  + +   +  ++LV       L+ +  +   + G ++   + S  + ++W+ 
Sbjct: 3   FDWPYLLSLFQNQDFWDASLLV-----VELSVATWLGGIVFGMVLALAKQSHYRPLSWLA 57

Query: 130 RVYVEVFRNIPPLVVIFFLYKS 151
             Y+ +FR++P LV+I F+Y  
Sbjct: 58  GSYIWLFRSLPLLVLIIFIYNV 79


>gi|260654207|ref|ZP_05859697.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Jonquetella anthropi E3_33 E1]
 gi|260630840|gb|EEX49034.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Jonquetella anthropi E3_33 E1]
          Length = 521

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 14/226 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L           ++ + +  L IVL +    ++R F  +   AL + YI   L+ G
Sbjct: 292 YVSFLPVFGRAALVTLQVSLAAMALAIVLGMVL-AVARLFGPRWLSALAVGYIE--LLRG 348

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L+ +   +                       F +  I L    AA+ AE  R+GL+A
Sbjct: 349 TPVLIQLFFIFY-----------GLPNVGIKLSPFAAGIIGLGMNYAAYEAENYRAGLMA 397

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPR QME A+ALG+T  +A R V++PQA+R  +PP+T+ +++LLK+SSL   +   DL  
Sbjct: 398 VPRQQMEGALALGMTRSQALRHVVVPQAIRVSLPPVTNDFISLLKDSSLVSMITLIDLTK 457

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G + N       I ++   IY  + +           ++A+  K
Sbjct: 458 AYGQLANTYYDFFGIGIMVALIYFLIGLPFVRLARFAERRLAVAVK 503



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 4/203 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+        + T  ++ + M  A ++G ++   RL   + ++ +   Y+E+ R  P L+
Sbjct: 294 SFLPVFGRAALVTLQVSLAAMALAIVLGMVLAVARLFGPRWLSALAVGYIELLRGTPVLI 353

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVL 200
            +FF++  + +V            G+ +N              A        +  LG+  
Sbjct: 354 QLFFIFYGLPNVGIKLSPFAAGIIGLGMNYAAYEAENYRAGLMAVPRQQMEGALALGMTR 413

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           S  A R             P+      L+     + +I L         +   +    G 
Sbjct: 414 S-QALRHVVVPQAIRVSLPPVTNDFISLLKDSSLVSMITLIDLTKAYGQLANTYYDFFGI 472

Query: 261 TVSPEFMSLYIALSCYTAAFIAE 283
            +    +   I L     A  AE
Sbjct: 473 GIMVALIYFLIGLPFVRLARFAE 495


>gi|330984830|gb|EGH82933.1| putative ABC transporter ATP-binding protein [Pseudomonas syringae
           pv. lachrymans str. M301315]
          Length = 420

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 14/240 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   FG+F +          +  +   +V S VLG VL+L     ++         
Sbjct: 1   MTFDWKYMFGLFSDTEFWMATWTVIQLSVLTWVISIVLGFVLAL-----AKQSSLPLINL 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               YI  F    LP LVL+   Y L    P          + ++  F +  IA+     
Sbjct: 56  PAKAYIWLF--RSLPLLVLLIFVYNLPQAVPA-------TSAVLANPFWAGLIAMVMCET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R GL+++ +GQ EAA ALGL        +++PQA+R  +P LT++Y++++K S
Sbjct: 107 AYVAEIHRGGLLSIAKGQTEAARALGLRFVGTQWRIVIPQALRVALPSLTNEYISIVKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL   +   +++ VG  + +Q    +E +    F Y+ +  +    + RL   + + + K
Sbjct: 167 SLVSVISLTEILMVGQRLYSQNFLVMETMAAVAFYYVLIVTVFDFLLKRLERYLDVTQHK 226



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 66/193 (34%), Gaps = 6/193 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             +       L+    + + ++G ++   + S+  L+    + Y+ +FR++P LV++ F+
Sbjct: 17  FWMATWTVIQLSVLTWVISIVLGFVLALAKQSSLPLINLPAKAYIWLFRSLPLLVLLIFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLF 203
           Y    +V           +   +         +       +   +         + L   
Sbjct: 77  YNLPQAVPATSAVLANPFWAGLIAMVMCETAYVAEIHRGGLLSIAKGQTEAARALGLRFV 136

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTV 262
            T+      +    ALP L      I  L +LV +I+L   L   + +  Q   +  +  
Sbjct: 137 GTQWRIVIPQALRVALPSLTNEYISIVKLSSLVSVISLTEILMVGQRLYSQNFLVMETMA 196

Query: 263 SPEFMSLYIALSC 275
           +  F  + I    
Sbjct: 197 AVAFYYVLIVTVF 209


>gi|313680185|ref|YP_004057924.1| amino acid ABC transporter membrane protein, paat family
           [Oceanithermus profundus DSM 14977]
 gi|313152900|gb|ADR36751.1| amino acid ABC transporter membrane protein, PAAT family
           [Oceanithermus profundus DSM 14977]
          Length = 275

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 23/276 (8%)

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +A I   YV  F  I   +  +FL  +  +                          L  +
Sbjct: 14  LAAIAVGYVVFFAGIEAALRWYFLAVNFTASKVPNFA---------------HNLRLGAE 58

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+ V S V G+ L LFA  ++R       +     Y+  ++I G P LV I   Y  
Sbjct: 59  VTIKLTVISSVTGLFLGLFAG-IARLSKNPLFRWPAQFYV--WVIRGTPLLVQILFAYNA 115

Query: 245 --HFDKPVLGQFNFIGGSTVSP---EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                +P       +G   +      + + +IALS    A+ AE++R+G+ A+ +GQ EA
Sbjct: 116 LPFLLEPAWKYLQPLGAPPIQDVLTPYWAAFIALSVNVGAYNAEVIRAGIQAIAKGQWEA 175

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A++LG+   +  R +++PQA++ ++PPL +  + LLK+SSLA  +   +LV  G  +I+ 
Sbjct: 176 AMSLGMRPFQVMRYIIVPQAIKIVVPPLVNNVIALLKDSSLASVITLLELVHQGQRMISI 235

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + +E+ +    IYL L+ ++  F + L  ++A +
Sbjct: 236 TFRPVEVYVAVAAIYLILTTVLTFFTDWLEREMARR 271



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 28/69 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L     +    +G   G  RLS N L  W  + YV V R  P LV I F Y +
Sbjct: 56  GAEVTIKLTVISSVTGLFLGLFAGIARLSKNPLFRWPAQFYVWVIRGTPLLVQILFAYNA 115

Query: 152 VLSVLPIPD 160
           +  +L    
Sbjct: 116 LPFLLEPAW 124


>gi|77459078|ref|YP_348584.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77383081|gb|ABA74594.1| amino acid ABC transporter membrane protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 292

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 118/254 (46%), Gaps = 8/254 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            +  +    L              G FL +  + +        A   V +  LGIV  + 
Sbjct: 40  TVIVIAIIGLVRAFAEGKIEWSYIGQFLTSEAIMWGLFNTIIMA---VLAMALGIVFGVI 96

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGST 261
            T + R       + + + Y   F   G P ++ + L + L    P +       +   +
Sbjct: 97  -TAIMRMSANPILRYVAVTYTWLF--RGTPLILQLLLWFNLALIFPTIGIPGLFELDTVS 153

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +   F++  + LS    A+ AE+VR+GL++V  GQ EAA ++G+   +A R ++LPQAMR
Sbjct: 154 LMTPFVAALLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKSIGMPRLQALRRIILPQAMR 213

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            IIPP+ ++++ ++K +SLA  + +++L+     I     + +E++++    YL+   ++
Sbjct: 214 IIIPPVGNEFIGMVKMTSLASVIQYSELLYNAQNIYYANARVMELLIVAGIWYLATVTVL 273

Query: 382 ALFMNRLNAKIALK 395
           +   +RL  + A  
Sbjct: 274 SFGQSRLERRFARG 287



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 31/66 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           AI+ G  NT  +A   M    + G +    R+SAN ++ ++   Y  +FR  P ++ +  
Sbjct: 71  AIMWGLFNTIIMAVLAMALGIVFGVITAIMRMSANPILRYVAVTYTWLFRGTPLILQLLL 130

Query: 148 LYKSVL 153
            +   L
Sbjct: 131 WFNLAL 136


>gi|146312151|ref|YP_001177225.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145319027|gb|ABP61174.1| L-cystine ABC transporter membrane protein / Diaminopimelate ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 222

 Score =  159 bits (402), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPYLLKGAVFTLQLSLGGMFFGLVLGFILALM-----RMSPVLPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISVF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 SETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQER 219



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ VFR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSLGGMFFGLVLGFILALMRMSPVLPVRWLARFYISVFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +       D       G+ LN
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLN 98


>gi|330836706|ref|YP_004411347.1| amino acid ABC transporter membrane protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329748609|gb|AEC01965.1| amino acid ABC transporter membrane protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 289

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 112/210 (53%), Gaps = 19/210 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                   + S V+G++  L A   SR  +  +G       +   LI G+P LV +   Y
Sbjct: 95  FQVTVFAIILSVVIGVLAGLGAVSKSRVINLISG-------VYVELIRGIPLLVQLIFIY 147

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                         +G        ++  IAL     A++ EI+R+G+ A+P+GQMEAAIA
Sbjct: 148 ------------FAVGRFINVEGVVAAIIALGICFGAYMGEIIRAGIQAIPKGQMEAAIA 195

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGLT  +A R V+LPQ ++ ++P + ++++++LK+SSL   +  +D++  G   I++T  
Sbjct: 196 LGLTRTQAFRSVILPQTIKIVLPAIGNEFISMLKDSSLVSTLALSDILRRGREYISRTFL 255

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++E +LI   IYL ++++++  +  L  ++
Sbjct: 256 SLETMLIVALIYLIITLVLSRLVGILEERL 285



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/76 (31%), Positives = 38/76 (50%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                  T  + G   TF +    +I + +IG L G G +S ++++  I  VYVE+ R I
Sbjct: 78  DPYRKIFTVTVSGIPVTFQVTVFAIILSVVIGVLAGLGAVSKSRVINLISGVYVELIRGI 137

Query: 140 PPLVVIFFLYKSVLSV 155
           P LV + F+Y +V   
Sbjct: 138 PLLVQLIFIYFAVGRF 153


>gi|301793689|emb|CBW36075.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus pneumoniae INV104]
          Length = 521

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 10/172 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L +   +  G P +V   + Y   +        N           ++    +S  T A+
Sbjct: 342 VLNVYIEIFRGTPMIVQSMVIY---YGTAQAFGINLDRT-------LAAIFIVSINTGAY 391

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EIVR G++AV +GQ EAA ALG+TH +  R + LPQ +R+I+P   ++++  +K++S+
Sbjct: 392 MTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIALPQVVRNILPATGNEFVINIKDTSV 451

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 452 LNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 503



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S     +L G   T  ++  G I   IIG  +G  R +            KLV W+  VY
Sbjct: 287 SENWQQLLRGAGITLLISIVGTIIGLIIGLAIGVFRTAPLSENKAIYGLQKLVGWVLNVY 346

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E+FR  P +V    +Y       
Sbjct: 347 IEIFRGTPMIVQSMVIYYGTAQAF 370


>gi|283785663|ref|YP_003365528.1| putative cystine ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
 gi|282949117|emb|CBG88724.1| putative cystine ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
          Length = 222

 Score =  158 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG VL+L      R       + L  
Sbjct: 2   QESIQLVIDSLPYLLKGAVFTLQLSIGGMFFGLLLGFVLALM-----RLSPLLPLRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPVPAAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQERE 220



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   RLS    + W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRLSPLLPLRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +       D       G+ LN
Sbjct: 74  IYYGLPQFGIELDPVPAAMIGLSLN 98


>gi|220914445|ref|YP_002489754.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219861323|gb|ACL41665.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 365

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 126/271 (46%), Gaps = 15/271 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +    V   +     S+   P     +    F     ++    T+   A   +  FV
Sbjct: 77  WRWVGTAAVALGVLAVAWSLATNPRWEWGVVAQWFTAQSVVNGLLETLKLTAISGILGFV 136

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
           LG +L+L     S          + + +  +++    P LV + L Y L +    +    
Sbjct: 137 LGFILALMRLSASPLL-------VSVSWTFSWIFRSTPLLVQLLLWYNLGYLYEKISLGI 189

Query: 252 ----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                +F  +  +T+  +F +  + L+   AA+ AEI+R G+++V +GQ+EAA ALG+  
Sbjct: 190 PFTDVRFFEVQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGILSVDQGQLEAAAALGIPA 249

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            + +  ++LPQAMR+I+P   ++ + L+K +S+   + +++L      I N+T Q + ++
Sbjct: 250 WRRSTRIVLPQAMRAILPTAFNEIIGLVKGTSIVYVLAYSELFYTVQVIYNRTQQVLPLL 309

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+    Y+ ++ ++++F   +    +    +
Sbjct: 310 LVATLWYVVITSVLSVFQYYIERHYSKGAVR 340



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A +++ G + T  L     I   ++G ++   RLSA+ L+  +   +  +FR+ P LV +
Sbjct: 113 AQSVVNGLLETLKLTAISGILGFVLGFILALMRLSASPLLVSVSWTFSWIFRSTPLLVQL 172

Query: 146 FFLYK 150
              Y 
Sbjct: 173 LLWYN 177


>gi|239622358|ref|ZP_04665389.1| permease protein of ABC transporter system [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|239514355|gb|EEQ54222.1| permease protein of ABC transporter system [Bifidobacterium longum
           subsp. infantis CCUG 52486]
          Length = 345

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+      +  ++  P       +    N   L     T++      V + +L +
Sbjct: 47  VAAVIVVLLAAMLIQGLITNPRLDWPTVWKYLFNENVLEGIRYTLELTVISMVVAIILSV 106

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 107 ILAIM-----RKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGLFAVLIPKISLGIPFTSV 161

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 162 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 221

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 222 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 281

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
           F YL ++ ++ +  +RL A   
Sbjct: 282 FWYLLITSILMVVQSRLEAHFG 303



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+ A+++ ++    +  +  N  + +      +L                        +L
Sbjct: 46  IVAAVIVVLLAAMLIQGLITN-PRLDWPTVWKYLFNEN--------------------VL 84

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F   
Sbjct: 85  EGIRYTLELTVISMVVAIILSVILAIMRKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGL 144

Query: 151 SVLSVLP 157
             + +  
Sbjct: 145 FAVLIPK 151


>gi|206580951|ref|YP_002237707.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|290508767|ref|ZP_06548138.1| cystine transport system permease [Klebsiella sp. 1_1_55]
 gi|206570009|gb|ACI11785.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|289778161|gb|EFD86158.1| cystine transport system permease [Klebsiella sp. 1_1_55]
          Length = 222

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG +L+L      R       K L  
Sbjct: 2   QESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFILALM-----RMSPLWPVKWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  MYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAIASIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSSLQNYFENQLNRQER 219



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R+Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFILALMRMSPLWPVKWLARMYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPAAMIGLSLN 98


>gi|242279196|ref|YP_002991325.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122090|gb|ACS79786.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 260

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 110/228 (48%), Gaps = 15/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L F    +    ++ + S    +++ LF   L R    K    +   Y+   ++
Sbjct: 48  DPYRDILLFIPDGIVVTFEVTICSIFGALIIGLFTG-LGRISSNKFINLVASTYVE--VV 104

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV +   Y              +G     P+ +S  IA+S    A++ E+ R+G+
Sbjct: 105 RGIPLLVQLFYIYY------------AMGRVLQVPDMLSAIIAMSVCYGAYMGEVFRAGI 152

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++  GQ EAA +LG   ++   LV+LPQA R+I+PP+ ++++ LLK+SSL   +  AD+
Sbjct: 153 ESIDDGQTEAARSLGFNKKETMFLVILPQAWRTILPPVGNEFIALLKDSSLVSILAVADI 212

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  G     ++ Q  E   +   +YL ++++++  ++ +  ++   ++
Sbjct: 213 LRRGREFAAESFQYFETYTMIALVYLLITLILSRAVSHMEERLNHYDR 260



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 80  TSDSSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           T    Y   +L    G V TF +    +  A IIG   G GR+S+NK +  +   YVEV 
Sbjct: 45  TKPDPYRDILLFIPDGIVVTFEVTICSIFGALIIGLFTGLGRISSNKFINLVASTYVEVV 104

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R IP LV +F++Y ++  VL +PD
Sbjct: 105 RGIPLLVQLFYIYYAMGRVLQVPD 128


>gi|260598413|ref|YP_003210984.1| amino acid ABC transporter permease [Cronobacter turicensis z3032]
 gi|260217590|emb|CBA31845.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Cronobacter turicensis z3032]
          Length = 231

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG +L++      R         L  
Sbjct: 11  QESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFLLAMM-----RLSPFWPVSWLAR 65

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 66  FYISVF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYT 112

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL + +++L+K++SLA
Sbjct: 113 SETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLGNSFISLVKDTSLA 172

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 173 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNHFENQLNRQER 228



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G L+   RLS    V+W+ R Y+ VFR  P +  +F +
Sbjct: 24  LLKGAVFTLQLSIGGMFFGLVLGFLLAMMRLSPFWPVSWLARFYISVFRGTPLIAQLFMI 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 84  YYGLPQFGIELDPIPAAMIGLSLN 107


>gi|317047795|ref|YP_004115443.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949412|gb|ADU68887.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 291

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 14/267 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  LV+   L     S++  P+ +         +   L     T      I V + VL
Sbjct: 31  RWISALVLAVLLVLVAHSMITNPNFAWATVGKYLFSPTILLGLWTTFWLTLVIMVLAIVL 90

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKP 249
            I+L++      R             +I  F   G P LV +   Y L           P
Sbjct: 91  SILLAVM-----RLASNPLLVGFSRGWIWFF--RGTPVLVQLIFWYNLAALYPQVSLGIP 143

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L        + +     +  + L    +A++AEI+R+G+ +V  GQ EAA ALG+T  +
Sbjct: 144 GLFTLWSGSTNDLITPLAAAILGLGLNESAYMAEIIRAGISSVDDGQQEAARALGMTRGQ 203

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + V+LPQA+  IIPP  +Q + +LK +SL   +  +DL+     I ++T + I ++++
Sbjct: 204 YLKRVILPQAIPFIIPPTGNQVIGMLKTTSLVSVISLSDLLYSAQAIYSRTYENIPLLIV 263

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
               YL+ + +++L   R+        
Sbjct: 264 ACIWYLAATTVLSLVQARVEHHYRWTR 290



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL+G   TFWL    M+ A ++  L+   RL++N L+    R ++  FR  P LV + F 
Sbjct: 69  ILLGLWTTFWLTLVIMVLAIVLSILLAVMRLASNPLLVGFSRGWIWFFRGTPVLVQLIFW 128

Query: 149 YK 150
           Y 
Sbjct: 129 YN 130


>gi|296101734|ref|YP_003611880.1| cystine transport system permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295056193|gb|ADF60931.1| cystine transport system permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 222

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG VL+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAVFTLQLSIGGMFFGLVLGFVLALM-----RMSPVWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISVF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 SETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQER 219



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ VFR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSPVWPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPAAMIGLSLN 98


>gi|187731045|ref|YP_001879707.1| L-cystine ABC transporter permease [Shigella boydii CDC 3083-94]
 gi|187428037|gb|ACD07311.1| L-cystine ABC transporter, permease protein [Shigella boydii CDC
           3083-94]
          Length = 222

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R ++PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVVLPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|226304942|ref|YP_002764900.1| ABC transporter permease protein [Rhodococcus erythropolis PR4]
 gi|226184057|dbj|BAH32161.1| putative ABC transporter permease protein [Rhodococcus erythropolis
           PR4]
          Length = 324

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +   VV+  L + +  ++  P          F     L+   +T+       +  F 
Sbjct: 32  LRWVISAVVLVLLAQFIHGLVVNPGWDWPTFAQYFTAKSVLAALWMTIKLTLWGTILGFG 91

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDK 248
           LG+ L+L      R       + +   YI  F    +P +V +   +        L    
Sbjct: 92  LGVFLAL-----GRLSKNPVLQVIAWTYIWAF--RSIPLIVQLLFWFNITYLYQTLSLGI 144

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P   +F     S V   F +  I L+ + AA+ AEI+RSG+I+V  GQ+EAA +LG+   
Sbjct: 145 PFGPEFFTFQVSGVIGGFTAAVIGLALHQAAYSAEIIRSGIISVDHGQIEAAHSLGIPRS 204

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQAMR+I+P   ++ + L K +S+   +  A+L      I  + G+ + +++
Sbjct: 205 RQFFKIVLPQAMRAILPNAANEVIGLFKGTSIVSTMAIAELFYQVQVIFGRNGRVVPLLM 264

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+ ++++    +    A    +
Sbjct: 265 VATIWYIILTTLLSIGQYYVERHYARGSAR 294



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 31/71 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A ++L     T  L   G I    +G  +  GRLS N ++  I   Y+  FR+IP +V +
Sbjct: 68  AKSVLAALWMTIKLTLWGTILGFGLGVFLALGRLSKNPVLQVIAWTYIWAFRSIPLIVQL 127

Query: 146 FFLYKSVLSVL 156
            F +       
Sbjct: 128 LFWFNITYLYQ 138


>gi|325479869|gb|EGC82954.1| ABC transporter, permease protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 491

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 100/226 (44%), Gaps = 20/226 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALPLLYI 224
               L     T+       V SF LG++++L  +        +S            +  I
Sbjct: 274 YKYLLDGLKKTVIVTLAALVISFTLGLIIALVRSAALDMGNDVSGFSGVLIKVLDKIFGI 333

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P+ + + + + +                 +    +   I+ +  ++A++AE+
Sbjct: 334 FVTIIRGTPSTIQLLIMFNVIL-------------VNLDNIMLVAIISFALNSSAYMAEL 380

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ +V +G+ EAA +LGL++ +  R V++PQA+++ +P L ++ + L K +S+A  +
Sbjct: 381 FRGGINSVSKGEKEAARSLGLSNLQTMRKVVMPQAIKNSLPALGNEIITLFKETSIAGFI 440

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G ADL      +I+QT  A         IYL + + +     +L  
Sbjct: 441 GLADLTRGASIVISQTFDAATAYFSAAIIYLVIVMFMEKLFKKLEK 486


>gi|251793713|ref|YP_003008443.1| glutamine-binding periplasmic protein/glutamine transport system
           permease [Aggregatibacter aphrophilus NJ8700]
 gi|247535110|gb|ACS98356.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Aggregatibacter aphrophilus NJ8700]
          Length = 225

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 100/224 (44%), Gaps = 13/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                 +    T+      F     + ++++L       +   +  + L  +Y+ST  I 
Sbjct: 13  FWPMMEAAIDKTIPLAVISFFAGVAIALIVALIRIVEKPNLGIRLLQILCRIYVST--IR 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I + +                       F +  IA S    A+ +E +R+ ++
Sbjct: 71  GTPMLVQIFIIFY-----------GLPEVGIKLDPFPTAIIAFSINIGAYASETIRAAIL 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EA+ ++G+ + +     ++PQA+R  +PPL + +++ +K++SLA  V   ++ 
Sbjct: 120 SIPKGQWEASYSIGMNYYQTFTRTIMPQALRVSVPPLANTFISNVKDTSLASLVLVTEMF 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            V   I  +  + I I      IY  + ++++   +RL  +++ 
Sbjct: 180 RVAQNITAENYEFIMIYSEAALIYWCICLILSFAQDRLEKRLSR 223


>gi|134100501|ref|YP_001106162.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291005020|ref|ZP_06562993.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133913124|emb|CAM03237.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 315

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 8/242 (3%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P+    +    F     L    +T+   A   V  F+LG VL++      R        
Sbjct: 53  NPNFQWQVVGAYFTTPAVLHGLLMTLWLTAVTMVLGFLLGTVLAVM-----RLSGNPVLA 107

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSCY 276
           AL   Y+  F    +P LV +   + +    PVLG   F +    +     +  I L  +
Sbjct: 108 ALSWGYVWLF--RSIPLLVQLLFWFNIGALYPVLGVAPFSVSTVNLIGGTTTAIIGLVLH 165

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AEIVR G+++V  GQ E+A ALG+   +  R ++LPQAMR+IIPP  +  +  LK
Sbjct: 166 EAAYAAEIVRGGILSVDAGQTESAQALGMRKSRVLRRIVLPQAMRAIIPPSGNLLIGTLK 225

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   +   DL+     I N+    I ++L+    YL ++ ++      +    A   
Sbjct: 226 GTSIVSVIAVHDLLYSVQIIYNRNYLVIPLLLVACIWYLVVTTVLTTGQYYVERHYARGA 285

Query: 397 KK 398
           ++
Sbjct: 286 ER 287



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 39/78 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G + T WL    M+   ++GT++   RLS N ++A +   YV +FR+IP LV + F
Sbjct: 69  AVLHGLLMTLWLTAVTMVLGFLLGTVLAVMRLSGNPVLAALSWGYVWLFRSIPLLVQLLF 128

Query: 148 LYKSVLSVLPIPDHSIVL 165
            +        +      +
Sbjct: 129 WFNIGALYPVLGVAPFSV 146


>gi|15675263|ref|NP_269437.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS]
 gi|13622436|gb|AAK34158.1| hypothetical protein SPy_1315 [Streptococcus pyogenes M1 GAS]
          Length = 724

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/187 (30%), Positives = 99/187 (52%), Gaps = 17/187 (9%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RL         + +PL+ ++ F+ +G+P L+     +Q   +                 +
Sbjct: 554 RLISTVFVDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPIN-----------------D 596

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IALS    A+IAEIVR G+ AVP GQMEA+ +LGL++    R V+LPQA++ ++P
Sbjct: 597 FLAATIALSLNGGAYIAEIVRGGIEAVPAGQMEASRSLGLSYGTTMRKVILPQAVKLMLP 656

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +Q++  LK++++  A+G  +L   G  II +  Q+  +  I   IYL + I++    
Sbjct: 657 NFINQFVISLKDTTIVSAIGLVELFQTGKIIIARNYQSFRMYAILAIIYLIMIILLTRLA 716

Query: 386 NRLNAKI 392
            RL  ++
Sbjct: 717 KRLEKRL 723



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 14/208 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           D+  +     ++Y   +L G   T  L       A IIG + G   +S  K +  I  V+
Sbjct: 502 DESTISGLLSNNYKQ-LLAGLGTTLSLTLISFAIAIIIGIIFGMMAVSPTKSLRLISTVF 560

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V+V R IP ++V  F++  V +++                   LS               
Sbjct: 561 VDVVRGIPLMIVAAFIFWGVPNLIESMTGHQSPINDFLAATIALSLNGG----------- 609

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +++  IV        +     +  ++L L Y +T     LP  V + L   ++     L 
Sbjct: 610 AYIAEIVRGGIEAVPAG--QMEASRSLGLSYGTTMRKVILPQAVKLMLPNFINQFVISLK 667

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAF 280
               +    +   F +  I ++    +F
Sbjct: 668 DTTIVSAIGLVELFQTGKIIIARNYQSF 695


>gi|212716471|ref|ZP_03324599.1| hypothetical protein BIFCAT_01395 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660724|gb|EEB21299.1| hypothetical protein BIFCAT_01395 [Bifidobacterium catenulatum DSM
           16992]
          Length = 327

 Score =  158 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 12/243 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     + +    N   L     T+       V + +L ++L++      R       +
Sbjct: 48  NPRFEWNVVWKYLFNENVLEGIKYTLLLTVISMVIAIILAVILAVM-----RKSINPVLR 102

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-GQFNFIGGSTVSPEFMSLYI 271
            +   YI  F    + T ++    +      +    P    +F  I   +V   F + ++
Sbjct: 103 GVSWFYIWFFRGTPVYTQLVFWGLFAVLVPRIGVGIPFTSIEFWSIDSQSVITAFNAAWL 162

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   AA++AEIVR+GL AV  GQ EAA ALG+      R V+LPQAMR IIPP  +++
Sbjct: 163 GLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSMIMRRVVLPQAMRIIIPPTGNEF 222

Query: 332 LNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +LK +SL  AV F  +L      I  +  + I ++++    YL ++ ++ +  +RL  
Sbjct: 223 IGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVACIWYLVITSILMVLQSRLEK 282

Query: 391 KIA 393
              
Sbjct: 283 HFG 285



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+ A I+  ++   R S N ++  +   Y+  FR  P    + F  
Sbjct: 66  LEGIKYTLLLTVISMVIAIILAVILAVMRKSINPVLRGVSWFYIWFFRGTPVYTQLVFWG 125

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
              + V  I           F +    S  + ++ T          L
Sbjct: 126 LFAVLVPRIGVGIP------FTSIEFWSIDSQSVITAFNAAWLGLAL 166


>gi|215487123|ref|YP_002329554.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|312967119|ref|ZP_07781337.1| L-cystine transport system permease protein tcyB [Escherichia coli
           2362-75]
 gi|215265195|emb|CAS09584.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli O127:H6 str. E2348/69]
 gi|312288583|gb|EFR16485.1| L-cystine transport system permease protein tcyB [Escherichia coli
           2362-75]
          Length = 222

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|301645563|ref|ZP_07245493.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307138585|ref|ZP_07497941.1| putative transporter subunit [Escherichia coli H736]
 gi|331642540|ref|ZP_08343675.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H736]
 gi|301076172|gb|EFK90978.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|331039338|gb|EGI11558.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H736]
          Length = 222

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T     + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLDVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|312112152|ref|YP_003990468.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|311217253|gb|ADP75857.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 235

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 111/223 (49%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + V +F +G++L++ AT L+R    K  + +  +Y+S   I G P L
Sbjct: 27  LPLVKGALYYTIPLTVITFAIGLILAI-ATALARISGVKALEIIARIYVSA--IRGTPLL 83

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +                     P F +  I  S    A+ +EIVR+ ++++P+G
Sbjct: 84  VQLFIIFY-----------GLPNIGITIPSFPAAIIGFSLNVGAYASEIVRAAILSIPKG 132

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LG+T  +A R V+ PQA+R  IPPL++ +++L+K++SLA  +  +++      
Sbjct: 133 QWEAAYSLGMTTGQALRRVIFPQAVRVSIPPLSNTFISLVKDTSLASLILVSEMFRKAQE 192

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I +   + + +      IY  +  ++++  NR+  ++     +
Sbjct: 193 IASTNYEFLLLYTEAAIIYWIICFLLSIVQNRIEERLNRYIAR 235



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 28/80 (35%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L         I+       R+S  K +  I R+YV   R  P LV +F ++  +
Sbjct: 34  LYYTIPLTVITFAIGLILAIATALARISGVKALEIIARIYVSAIRGTPLLVQLFIIFYGL 93

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++            G  LN
Sbjct: 94  PNIGITIPSFPAAIIGFSLN 113


>gi|229493104|ref|ZP_04386899.1| ABC-type amino acid transport system, permease component
           [Rhodococcus erythropolis SK121]
 gi|229320134|gb|EEN85960.1| ABC-type amino acid transport system, permease component
           [Rhodococcus erythropolis SK121]
          Length = 324

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +   VV+  L + +  ++  P          F     L+   +T+       +  F 
Sbjct: 32  LRWVISAVVLVLLAQFIHGLVVNPGWDWPTFAQYFTAKSVLAALWMTIKLTLWGTILGFG 91

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDK 248
           LG+ L+L      R       + +   YI  F    +P +V +   +        L    
Sbjct: 92  LGVFLAL-----GRLSKNPVLQVIAWTYIWAF--RSIPLIVQLLFWFNITYLYQTLSLGI 144

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P   +F     S V   F +  I L+ + AA+ AEI+RSG+I+V  GQ+EAA +LG+   
Sbjct: 145 PFGPEFFTFQVSGVIGGFTAAVIGLALHQAAYSAEIIRSGIISVDHGQIEAAHSLGIPRS 204

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQAMR+I+P   ++ + L K +S+   +  A+L      I  + G+ + +++
Sbjct: 205 RQFFKIVLPQAMRAILPNAANEVIGLFKGTSIVSTMAIAELFYQVQVIFGRNGRVVPLLM 264

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+ ++++    +    A    +
Sbjct: 265 VATIWYIILTTLLSIGQYYVERHYARGSAR 294



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 31/71 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A ++L     T  L   G I    +G  +  GRLS N ++  I   Y+  FR+IP +V +
Sbjct: 68  AKSVLAALWMTIKLTLWGTILGFGLGVFLALGRLSKNPVLQVIAWTYIWAFRSIPLIVQL 127

Query: 146 FFLYKSVLSVL 156
            F +       
Sbjct: 128 LFWFNITYLYQ 138


>gi|229823498|ref|ZP_04449567.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271]
 gi|229786942|gb|EEP23056.1| hypothetical protein GCWU000282_00796 [Catonella morbi ATCC 51271]
          Length = 470

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 12/181 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R         +  +Y+   L+ G+P +V   L + ++F  P +    F          ++
Sbjct: 299 RVQANPWLSGIAAVYVD--LMRGVPLIV---LSFFIYFGIPQMTGVRF-------SSAVA 346

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
               LS   AA++AEIVR G+ A+ +GQMEA+ +LGL++ K  + ++LPQA++ +IP   
Sbjct: 347 GITTLSLNAAAYVAEIVRGGIQAIDKGQMEASRSLGLSYGKTMQKIILPQAIKLMIPSFI 406

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK++S+   +G  +L   G  II +T Q+  + LI   +YL +   +     RL
Sbjct: 407 NQFVITLKDTSILSVIGLVELTQTGSVIIARTYQSGSMWLIVGLMYLIVITALTRLSKRL 466

Query: 389 N 389
            
Sbjct: 467 E 467



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 40/70 (57%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T W+A   +  A I+G ++G  R+ AN  ++ I  VYV++ R +P +V+ 
Sbjct: 267 GPALLSGLGTTLWIALISVALALILGIILGLLRVQANPWLSGIAAVYVDLMRGVPLIVLS 326

Query: 146 FFLYKSVLSV 155
           FF+Y  +  +
Sbjct: 327 FFIYFGIPQM 336


>gi|16129865|ref|NP_416428.1| inner membrane protein, predicted transporter subunit: membrane
           component of ABC superfamily [Escherichia coli str. K-12
           substr. MG1655]
 gi|24113295|ref|NP_707805.1| putative transport system permease protein (former yecC) [Shigella
           flexneri 2a str. 301]
 gi|26248184|ref|NP_754224.1| amino-acid ABC transporter permease YecS [Escherichia coli CFT073]
 gi|30063362|ref|NP_837533.1| putative transport system permease protein (former yecC) [Shigella
           flexneri 2a str. 2457T]
 gi|74311736|ref|YP_310155.1| putative transport system permease [Shigella sonnei Ss046]
 gi|89108753|ref|AP_002533.1| predicted transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91211137|ref|YP_541123.1| putative transport system permease [Escherichia coli UTI89]
 gi|110805891|ref|YP_689411.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|117624060|ref|YP_852973.1| putative transport system permease protein [Escherichia coli APEC
           O1]
 gi|157161390|ref|YP_001458708.1| L-cystine ABC transporter, permease protein [Escherichia coli HS]
 gi|170019744|ref|YP_001724698.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170081566|ref|YP_001730886.1| ABC transporter membrane protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|170681367|ref|YP_001743325.1| L-cystine ABC transporter permease [Escherichia coli SMS-3-5]
 gi|188494690|ref|ZP_03001960.1| L-cystine ABC transporter, permease protein [Escherichia coli
           53638]
 gi|191168290|ref|ZP_03030083.1| L-cystine ABC transporter, permease protein [Escherichia coli B7A]
 gi|191173310|ref|ZP_03034840.1| L-cystine ABC transporter, permease protein [Escherichia coli F11]
 gi|193071132|ref|ZP_03052056.1| L-cystine ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194434972|ref|ZP_03067215.1| L-cystine ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194439561|ref|ZP_03071634.1| L-cystine ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|209919340|ref|YP_002293424.1| putative amino acid ABC transporter permease [Escherichia coli
           SE11]
 gi|218554502|ref|YP_002387415.1| putative ABC transporter permease [Escherichia coli IAI1]
 gi|218558776|ref|YP_002391689.1| transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli S88]
 gi|218689911|ref|YP_002398123.1| putative ABC transporter permease [Escherichia coli ED1a]
 gi|218695525|ref|YP_002403192.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli 55989]
 gi|218699518|ref|YP_002407147.1| putative ABC transporter permease [Escherichia coli IAI39]
 gi|218705413|ref|YP_002412932.1| putative ABC transporter permease [Escherichia coli UMN026]
 gi|227885655|ref|ZP_04003460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Escherichia coli 83972]
 gi|237705874|ref|ZP_04536355.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238901127|ref|YP_002926923.1| putative transporter subunit: membrane component of ABC superfamily
           [Escherichia coli BW2952]
 gi|253773129|ref|YP_003035960.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|256017884|ref|ZP_05431749.1| polar amino acid ABC transporter, inner membrane subunit [Shigella
           sp. D9]
 gi|256022424|ref|ZP_05436289.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia sp. 4_1_40B]
 gi|260855898|ref|YP_003229789.1| putative transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|260868510|ref|YP_003234912.1| putative transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|293405404|ref|ZP_06649396.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli FVEC1412]
 gi|293410277|ref|ZP_06653853.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B354]
 gi|293415229|ref|ZP_06657872.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B185]
 gi|293446300|ref|ZP_06662722.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B088]
 gi|298381048|ref|ZP_06990647.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli FVEC1302]
 gi|300818658|ref|ZP_07098866.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300822310|ref|ZP_07102451.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300899172|ref|ZP_07117450.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300904805|ref|ZP_07122632.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300917360|ref|ZP_07134029.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300925011|ref|ZP_07140934.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300928949|ref|ZP_07144453.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300935894|ref|ZP_07150850.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300951542|ref|ZP_07165376.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300956566|ref|ZP_07168847.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300982287|ref|ZP_07175997.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300993931|ref|ZP_07180606.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301029370|ref|ZP_07192466.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301305259|ref|ZP_07211356.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301327708|ref|ZP_07220914.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|306814258|ref|ZP_07448424.1| putative transporter subunit [Escherichia coli NC101]
 gi|307314175|ref|ZP_07593785.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309795972|ref|ZP_07690385.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331647511|ref|ZP_08348603.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli M605]
 gi|331653325|ref|ZP_08354330.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli M718]
 gi|331657963|ref|ZP_08358925.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA206]
 gi|331663416|ref|ZP_08364326.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA143]
 gi|331668612|ref|ZP_08369460.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA271]
 gi|331673436|ref|ZP_08374204.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA280]
 gi|331677803|ref|ZP_08378478.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H591]
 gi|331683470|ref|ZP_08384071.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H299]
 gi|84027923|sp|P0AFT3|YECS_ECOL6 RecName: Full=Inner membrane amino-acid ABC transporter permease
           protein yecS
 gi|84027924|sp|P0AFT2|YECS_ECOLI RecName: Full=Inner membrane amino-acid ABC transporter permease
           protein yecS
 gi|84027925|sp|P0AFT4|YECS_SHIFL RecName: Full=Inner membrane amino-acid ABC transporter permease
           protein yecS
 gi|26108588|gb|AAN80791.1|AE016762_44 Hypothetical amino-acid ABC transporter permease protein yecS
           [Escherichia coli CFT073]
 gi|1736577|dbj|BAA15738.1| predicted transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1788226|gb|AAC74985.1| inner membrane protein, predicted transporter subunit: membrane
           component of ABC superfamily [Escherichia coli str. K-12
           substr. MG1655]
 gi|24052302|gb|AAN43512.1| putative transport system permease protein (former yecC) [Shigella
           flexneri 2a str. 301]
 gi|30041614|gb|AAP17342.1| putative transport system permease protein (former yecC) [Shigella
           flexneri 2a str. 2457T]
 gi|73855213|gb|AAZ87920.1| putative transport system permease protein (former yecC) [Shigella
           sonnei Ss046]
 gi|91072711|gb|ABE07592.1| putative transport system permease protein [Escherichia coli UTI89]
 gi|110615439|gb|ABF04106.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|115513184|gb|ABJ01259.1| putative transport system permease protein [Escherichia coli APEC
           O1]
 gi|157067070|gb|ABV06325.1| L-cystine ABC transporter, permease protein [Escherichia coli HS]
 gi|169754672|gb|ACA77371.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169889401|gb|ACB03108.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|170519085|gb|ACB17263.1| L-cystine ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|188489889|gb|EDU64992.1| L-cystine ABC transporter, permease protein [Escherichia coli
           53638]
 gi|190901662|gb|EDV61418.1| L-cystine ABC transporter, permease protein [Escherichia coli B7A]
 gi|190906427|gb|EDV66036.1| L-cystine ABC transporter, permease protein [Escherichia coli F11]
 gi|192955527|gb|EDV86006.1| L-cystine ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194416807|gb|EDX32933.1| L-cystine ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194421470|gb|EDX37484.1| L-cystine ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|209912599|dbj|BAG77673.1| putative amino acid ABC transporter permease component [Escherichia
           coli SE11]
 gi|218352257|emb|CAU98013.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli 55989]
 gi|218361270|emb|CAQ98854.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli IAI1]
 gi|218365545|emb|CAR03272.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli S88]
 gi|218369504|emb|CAR17271.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli IAI39]
 gi|218427475|emb|CAR08249.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli ED1a]
 gi|218432510|emb|CAR13403.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Escherichia coli UMN026]
 gi|222033659|emb|CAP76400.1| Inner membrane amino-acid ABC transporter permease [Escherichia
           coli LF82]
 gi|226900631|gb|EEH86890.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227837228|gb|EEJ47694.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Escherichia coli 83972]
 gi|238863239|gb|ACR65237.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli BW2952]
 gi|253324173|gb|ACT28775.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|257754547|dbj|BAI26049.1| predicted transporter subunit [Escherichia coli O26:H11 str. 11368]
 gi|257764866|dbj|BAI36361.1| predicted transporter subunit [Escherichia coli O111:H- str. 11128]
 gi|260448965|gb|ACX39387.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281178980|dbj|BAI55310.1| putative amino acid ABC transporter permease component [Escherichia
           coli SE15]
 gi|281601360|gb|ADA74344.1| putative transport system permease protein [Shigella flexneri
           2002017]
 gi|284921831|emb|CBG34904.1| putative cystine ABC transporter, permease protein [Escherichia
           coli 042]
 gi|291323130|gb|EFE62558.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B088]
 gi|291427612|gb|EFF00639.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli FVEC1412]
 gi|291432877|gb|EFF05856.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B185]
 gi|291470745|gb|EFF13229.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli B354]
 gi|294489589|gb|ADE88345.1| L-cystine ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|298278490|gb|EFI20004.1| inner membrane amino-acid ABC transporter permease yecS
           [Escherichia coli FVEC1302]
 gi|299877725|gb|EFI85936.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300307264|gb|EFJ61784.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300316629|gb|EFJ66413.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300357209|gb|EFJ73079.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300403273|gb|EFJ86811.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300406432|gb|EFJ89970.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300415406|gb|EFJ98716.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300418830|gb|EFK02141.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300449217|gb|EFK12837.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300458913|gb|EFK22406.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300463103|gb|EFK26596.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300525193|gb|EFK46262.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300528830|gb|EFK49892.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300839465|gb|EFK67225.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300845752|gb|EFK73512.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|305852417|gb|EFM52868.1| putative transporter subunit [Escherichia coli NC101]
 gi|306906144|gb|EFN36662.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307553932|gb|ADN46707.1| putative amino acid transport protein ABC superfamily [Escherichia
           coli ABU 83972]
 gi|307626605|gb|ADN70909.1| putative transporter subunit [Escherichia coli UM146]
 gi|308120422|gb|EFO57684.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|309702213|emb|CBJ01529.1| putative cystine ABC transporter, permease protein [Escherichia
           coli ETEC H10407]
 gi|312946510|gb|ADR27337.1| putative transporter subunit [Escherichia coli O83:H1 str. NRG
           857C]
 gi|313650135|gb|EFS14548.1| L-cystine transport system permease protein tcyB [Shigella flexneri
           2a str. 2457T]
 gi|315061218|gb|ADT75545.1| predicted transporter subunit: membrane component of ABC
           superfamily [Escherichia coli W]
 gi|315136555|dbj|BAJ43714.1| inner membrane amino-acid ABC transporter permease [Escherichia
           coli DH1]
 gi|315257251|gb|EFU37219.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315286628|gb|EFU46061.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315290284|gb|EFU49662.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315296501|gb|EFU55798.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|315617859|gb|EFU98457.1| L-cystine transport system permease protein tcyB [Escherichia coli
           3431]
 gi|320176078|gb|EFW51146.1| Cystine ABC transporter, permease protein [Shigella dysenteriae CDC
           74-1112]
 gi|320178180|gb|EFW53157.1| Cystine ABC transporter, permease protein [Shigella boydii ATCC
           9905]
 gi|320194370|gb|EFW69001.1| Cystine ABC transporter, permease protein [Escherichia coli
           WV_060327]
 gi|320198612|gb|EFW73212.1| Cystine ABC transporter, permease protein [Escherichia coli
           EC4100B]
 gi|323152749|gb|EFZ39021.1| L-cystine transport system permease protein tcyB [Escherichia coli
           EPECa14]
 gi|323165286|gb|EFZ51074.1| L-cystine transport system permease protein tcyB [Shigella sonnei
           53G]
 gi|323180831|gb|EFZ66371.1| L-cystine transport system permease protein tcyB [Escherichia coli
           1180]
 gi|323186306|gb|EFZ71656.1| L-cystine transport system permease protein tcyB [Escherichia coli
           1357]
 gi|323378205|gb|ADX50473.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323937193|gb|EGB33473.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1520]
 gi|323940419|gb|EGB36610.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E482]
 gi|323948201|gb|EGB44189.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H120]
 gi|323952413|gb|EGB48286.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H252]
 gi|323956315|gb|EGB52058.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H263]
 gi|323961967|gb|EGB57566.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H489]
 gi|323968335|gb|EGB63742.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli M863]
 gi|323972719|gb|EGB67920.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TA007]
 gi|323977901|gb|EGB72987.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TW10509]
 gi|324007277|gb|EGB76496.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324013510|gb|EGB82729.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|324017954|gb|EGB87173.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324118972|gb|EGC12861.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1167]
 gi|327253049|gb|EGE64703.1| L-cystine transport system permease protein tcyB [Escherichia coli
           STEC_7v]
 gi|330911726|gb|EGH40236.1| cystine ABC transporter, permease protein [Escherichia coli AA86]
 gi|331043235|gb|EGI15373.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli M605]
 gi|331049423|gb|EGI21495.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli M718]
 gi|331056211|gb|EGI28220.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA206]
 gi|331059215|gb|EGI31192.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA143]
 gi|331063806|gb|EGI35717.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA271]
 gi|331069634|gb|EGI41021.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli TA280]
 gi|331074263|gb|EGI45583.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H591]
 gi|331079685|gb|EGI50882.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Escherichia coli H299]
 gi|332089652|gb|EGI94754.1| L-cystine transport system permease protein tcyB [Shigella boydii
           5216-82]
 gi|332095438|gb|EGJ00459.1| L-cystine transport system permease protein tcyB [Shigella
           dysenteriae 155-74]
 gi|332101263|gb|EGJ04609.1| L-cystine ABC transporter [Shigella sp. D9]
          Length = 222

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|298504919|gb|ADI83642.1| ABC transporter, membrane protein [Geobacter sulfurreducens KN400]
          Length = 340

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 19/250 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + + +     P +   L   +      L    +T+         S + G++++L      
Sbjct: 110 FTASVEREKKPGYVTFLQDCLKFLPVLLKGAVMTLLLVLCTMFISPIGGLLIAL-----G 164

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +   AL    I  F   G P L+ +   Y   +  P L       G T+ P   +
Sbjct: 165 RISTFRPLSALCWFVIWLF--RGTPLLLQLFFIY---YGLPSL-------GITLKP-ITA 211

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L    +A++ EI+R  + ++  GQ EAA ALG+T+ +  R V++PQ  + ++PP+ 
Sbjct: 212 AVIGLGLNYSAYLGEIIRGAIQSIDHGQTEAAKALGMTYGQTMRRVVIPQTYKRLMPPIG 271

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ L+K+++L   +   +L+     + N T   +  +++   IYL  +        ++
Sbjct: 272 NEFIALIKDTALVSTIAMVELMRAADQMFN-TYFNVTALILAAVIYLIFTTFFTFLFEKI 330

Query: 389 NAKIALKEKK 398
             +  + E++
Sbjct: 331 EHRAGIYERR 340



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G V T  L    M  + I G L+  GR+S  + ++ +C   + +FR  P L+ 
Sbjct: 132 FLPVLLKGAVMTLLLVLCTMFISPIGGLLIALGRISTFRPLSALCWFVIWLFRGTPLLLQ 191

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +FF+Y  + S+            G+ LN 
Sbjct: 192 LFFIYYGLPSLGITLKPITAAVIGLGLNY 220


>gi|307300617|ref|ZP_07580392.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306904151|gb|EFN34736.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 288

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 14/263 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++I  +      +   P+    +      ++R L   +LT+       V   VLG + ++
Sbjct: 18  LLILLVLYCATMIASNPNFGWDVVADYLFDSRILWGLSLTIWLTVVTMVIGVVLGTIFAI 77

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKPVLGQFN 255
            A              +   YI  F   G P LV +   Y       QL    P    + 
Sbjct: 78  MAMA-----DNVVISTVANAYIWFF--RGTPVLVQLIFWYNLGALFPQLSVGVPFTSLWV 130

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  +T+     +  + L     A+++EI+RSGL++V  GQ +AA +LG+T+ K    +L
Sbjct: 131 SVPTNTLISPVTAAVLGLGLNEGAYMSEIIRSGLMSVDPGQRQAAKSLGMTNGKTLWRIL 190

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAM  IIPP  +Q + +LK SSL   +  ADL+    TI ++  Q I ++++    YL
Sbjct: 191 LPQAMPIIIPPTGNQTIGMLKTSSLVSVISLADLLYSAQTIYSRNFQTIPLLIVACIWYL 250

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
           + + +++    R+    A   ++
Sbjct: 251 AATTILSAVQVRIERHFARSSQR 273



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 36/101 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T WL    M+   ++GT+     ++ N +++ +   Y+  FR  P LV + F 
Sbjct: 50  ILWGLSLTIWLTVVTMVIGVVLGTIFAIMAMADNVVISTVANAYIWFFRGTPVLVQLIFW 109

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y        +          + +    L  P         +
Sbjct: 110 YNLGALFPQLSVGVPFTSLWVSVPTNTLISPVTAAVLGLGL 150


>gi|237731964|ref|ZP_04562445.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
 gi|226907503|gb|EEH93421.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
          Length = 222

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG +L+L      R       + L  
Sbjct: 2   HESIQLVIDSLPYLLKGAVFTLQLSIGGMFFGLVLGFILALM-----RLSPLLPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EA  ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAGASIGMTRWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEEQLNRQERE 220



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLVLGFILALMRLSPLLPVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +       D       G+ LN
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLN 98


>gi|326693347|ref|ZP_08230352.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 482

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 17/220 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+       V + + GI+L +              + +    I  F     
Sbjct: 278 MAFLKGLWETIVLTVFGIVLASIWGIILGVMG-----VSQNGFVRGISSTIIYIFR---- 328

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ L + ++   P +            P   +  + L     A+    VR G  AV
Sbjct: 329 -GLPLMVLAFFIYIGLPGVIGMKI-------PAVTAGILTLVLNEGAYTGAFVRGGFEAV 380

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQMEAA +LGL + +A R V++PQ +R +IP   +Q++  LK++S+  A+G  +L   
Sbjct: 381 DRGQMEAARSLGLPYSRAMRRVIMPQGIRIMIPSFINQFIITLKDTSILSAIGILELTQT 440

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  I+++  Q   +  I   IYL +  ++    N +  +I
Sbjct: 441 GSLIVSRNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKRI 480



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   A L G   T  L   G++ A+I G ++G   +S N  V  I    + +FR +P +V
Sbjct: 275 SNKMAFLKGLWETIVLTVFGIVLASIWGIILGVMGVSQNGFVRGISSTIIYIFRGLPLMV 334

Query: 144 VIFFLYKSVLSVLPI 158
           + FF+Y  +  V+ +
Sbjct: 335 LAFFIYIGLPGVIGM 349


>gi|323490322|ref|ZP_08095537.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
 gi|323395992|gb|EGA88823.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
          Length = 222

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 19/231 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           V    M      L    +T+   A   +    +G+V +L      +    K  + +  +Y
Sbjct: 8   VYEVFMRTYPGFLRATVVTLQLTAIGVILGTAIGLVFALM-----KISGSKILQGIANVY 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I+  +I G P +V I   Y              I        F +  IAL  +  A+IAE
Sbjct: 63  IT--VIRGTPLIVQIMFLY------------FGIVEIYTMDNFWAGAIALGIHNGAYIAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  +  V  GQ EA+++LG+  ++  + ++ PQA+R  IPPL +Q++  LK+SSL   
Sbjct: 109 IFRGAIQGVDPGQREASMSLGMNRKQTMQRIVFPQALRRSIPPLGNQFIITLKDSSLVYI 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G +++ ++      Q+ Q  E  L+    YL L ++    +     K+ +
Sbjct: 169 IGVSEIFALANREAAQSFQPFESFLVVALYYLVLVMIFTYLLRWYENKLDV 219



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L   V T  L   G+I  T IG +    ++S +K++  I  VY+ V R  P +V I FL
Sbjct: 19  FLRATVVTLQLTAIGVILGTAIGLVFALMKISGSKILQGIANVYITVIRGTPLIVQIMFL 78

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  ++ +  + +           N   +
Sbjct: 79  YFGIVEIYTMDNFWAGAIALGIHNGAYI 106


>gi|323706491|ref|ZP_08118051.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534153|gb|EGB23944.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 220

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +        +        +    ++ + S  +G VL L    L +    K    +   Y+
Sbjct: 1   MNLDFSSMPQYTQLFINGLIMTIELTIISVAIGAVLGLIV-ALMKMSSVKILSFIGSAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P LV I + Y        L QF         P F+   IALS  +A ++AEI
Sbjct: 60  E--IIRGTPLLVQILIIYN------GLPQFG-----IKFPGFVVGIIALSMNSAGYVAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ AV  GQMEA+ +LG++H  A R V++PQA+++I+P L ++++ +LK SS+   +
Sbjct: 107 IRSGIQAVDPGQMEASRSLGMSHSMAMRYVIIPQAIKNILPALGNEFVVMLKESSIVSVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           GFADL      + + T +A E ++I   IY  ++++ +  +++   ++   + +
Sbjct: 167 GFADLTRQAEIVSSVTYRAFEPLIIIAAIYFVMTLVFSRLLSKFERRLRTGDTR 220



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 47/111 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++S   Y    + G + T  L    +    ++G +V   ++S+ K++++I   YVE+ 
Sbjct: 3   LDFSSMPQYTQLFINGLIMTIELTIISVAIGAVLGLIVALMKMSSVKILSFIGSAYVEII 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R  P LV I  +Y  +          +V    + +N+ G     +     A
Sbjct: 63  RGTPLLVQILIIYNGLPQFGIKFPGFVVGIIALSMNSAGYVAEIIRSGIQA 113


>gi|307330911|ref|ZP_07610044.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306883452|gb|EFN14505.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 312

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 5/256 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V+   +   ++S     D +       F +   L     T+       V   VLGI+L++
Sbjct: 36  VITIAVLFLLISAFARGDVNWNAIPDYFFDGEVLRGVRNTVWITILSMVLGVVLGIILAV 95

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R        ++   YI  F    +   +L+     L FD   +        S  
Sbjct: 96  M-----RLSKNPVTASIAWGYIWFFRGTPVYVQLLVWFNLGLVFDYINIMPIYKDEWSDF 150

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F++  + L    AA++AEI R+GL +V  GQ EAA ALG++H K  R V+LPQAMR 
Sbjct: 151 MTPFLAALLGLGLNEAAYMAEICRAGLQSVDEGQSEAAQALGMSHAKTLRRVVLPQAMRV 210

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PP  ++++N+LK +SL +AV + DL+     +   +G   E++ +    YL L+ +++
Sbjct: 211 IVPPTGNEFINMLKTTSLVIAVQYWDLLQATSEVGQNSGATAEMLFLAAAWYLILTSVLS 270

Query: 383 LFMNRLNAKIALKEKK 398
           +    L    A    +
Sbjct: 271 VGQYYLERYYARGSSR 286



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 34/102 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT W+    M+   ++G ++   RLS N + A I   Y+  FR  P  V +   +
Sbjct: 69  LRGVRNTVWITILSMVLGVVLGIILAVMRLSKNPVTASIAWGYIWFFRGTPVYVQLLVWF 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
              L    I    I            L+         A    
Sbjct: 129 NLGLVFDYINIMPIYKDEWSDFMTPFLAALLGLGLNEAAYMA 170


>gi|283832682|ref|ZP_06352423.1| L-cystine ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
 gi|291072357|gb|EFE10466.1| L-cystine ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
          Length = 222

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPYLLKGAVFTLQLSIGGMFFGLVLGFILALM-----RLSPLLPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISVF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EA  ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAGASIGMTRWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +EK+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEEQLNRQEKE 220



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   RLS    V W+ R Y+ VFR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLVLGFILALMRLSPLLPVRWLARFYISVFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +       D       G+ LN
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLN 98


>gi|317406132|gb|EFV86389.1| polar amino acid transport system permease [Achromobacter
           xylosoxidans C54]
          Length = 222

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 13/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   + +LG V+ L       +        L  +Y+  F   G P LV + + +  
Sbjct: 21  VTIEVTAGALLLGCVIGLLVGVGRLNPQRSIIYNLCSVYLLFF--RGTPLLVQLFIWF-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P F    + L  Y+ A+++EIVR  + +V RGQ EAA +LG
Sbjct: 77  ---------FGLPQFGVTLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A R+++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++
Sbjct: 128 MSSGQAMRIIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E  L+   IYL L+    L + R+  ++ 
Sbjct: 188 ETYLVVALIYLVLTTAAMLILRRIEQRLR 216



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-LVAWICRVYVEV 135
           + +    +   A++ G V T  +    ++   +IG LVG GRL+  + ++  +C VY+  
Sbjct: 3   LDFAPVFADFDALVRGAVVTIEVTAGALLLGCVIGLLVGVGRLNPQRSIIYNLCSVYLLF 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FR  P LV +F  +  +               G+ + 
Sbjct: 63  FRGTPLLVQLFIWFFGLPQFGVTLPAFACGVLGLGMY 99


>gi|313885604|ref|ZP_07819354.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619334|gb|EFR30773.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 551

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 103/239 (43%), Gaps = 15/239 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               V        ++ +     T+       +   ++G++++++ T      +   G   
Sbjct: 301 FFGQVAYIWSEYGSQFIRGAINTLWIALLSTIIGTLIGLLVAIYRTIPISRKNNPIGYIF 360

Query: 220 P-----LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
                 L+     +  G P +V   L +        L  F  +  S++    ++  + +S
Sbjct: 361 YKILDFLIVAYIEIFRGTPMMVQAMLIFY------GLKLFFNLDLSSM----VAAVLIVS 410

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T A+++E++R G+ +V  GQ EAA A+G+ H +    V+LPQA+R+ +P L ++++  
Sbjct: 411 INTGAYLSEVMRGGITSVDEGQAEAAKAIGMNHFQTMSNVVLPQALRATLPALGNEFVIN 470

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +K++S+   +   +L     ++   T    +  LI   IY  L+      +  +  K++
Sbjct: 471 IKDTSVLNVIAVTELFFTTKSVAGSTYLTFQTFLITSIIYFVLTFATTRILRLIEFKLS 529



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICR 130
           S Y +  + G +NT W+A    I  T+IG LV   R                K++ ++  
Sbjct: 310 SEYGSQFIRGAINTLWIALLSTIIGTLIGLLVAIYRTIPISRKNNPIGYIFYKILDFLIV 369

Query: 131 VYVEVFRNIPPLVVIFFLYKSV 152
            Y+E+FR  P +V    ++  +
Sbjct: 370 AYIEIFRGTPMMVQAMLIFYGL 391


>gi|328950983|ref|YP_004368318.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
 gi|328451307|gb|AEB12208.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
          Length = 283

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 123/257 (47%), Gaps = 8/257 (3%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           ++         +  +     F     +          +   K+ V S + G+++ L A  
Sbjct: 30  YIAFFNGLAWLLERYLAFFGFTPEKISFYAQSLRFGAEVTLKLTVISSIAGLIIGLVAG- 88

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSP 264
           +SR       +     YI  ++I G P LV I   Y        P+      +G  ++  
Sbjct: 89  ISRLSRNPLFRYPAAFYI--WVIRGTPLLVQILFAYNGLPFLLDPLWRPLEALGLPSIQD 146

Query: 265 ---EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               + + ++AL+    A+ AE++R+G+ A+ +GQ EAA +LGL+  +  R +++PQA+R
Sbjct: 147 ILVPYWAAFLALAFNVGAYNAEVIRAGIQAISKGQWEAAHSLGLSPAQVMRYIVIPQAVR 206

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++PPL +  + LLK+SSLA+A+   +LV  G  II+ T + +EI +    +YL L+ ++
Sbjct: 207 IVVPPLVNNVIALLKDSSLAMAITLLELVLAGQRIISATFRPVEIYVAVAMVYLILTTVL 266

Query: 382 ALFMNRLNAKIALKEKK 398
             F N L  ++     +
Sbjct: 267 TFFTNWLERRLQASGAR 283



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 30/69 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA ++  G   T  L     I   IIG + G  RLS N L  +    Y+ V R  P LV 
Sbjct: 58  YAQSLRFGAEVTLKLTVISSIAGLIIGLVAGISRLSRNPLFRYPAAFYIWVIRGTPLLVQ 117

Query: 145 IFFLYKSVL 153
           I F Y  + 
Sbjct: 118 ILFAYNGLP 126


>gi|270284367|ref|ZP_05965993.2| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Bifidobacterium gallicum DSM 20093]
 gi|270276731|gb|EFA22585.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Bifidobacterium gallicum DSM 20093]
          Length = 322

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 12/243 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     + +    N R LS    T+       V + +L ++L++      R       +
Sbjct: 44  NPRFEWNVVWKYLFNERVLSGVGYTLLLTVISMVVAIILAVILAIM-----RKSVNPVLR 98

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-GQFNFIGGSTVSPEFMSLYI 271
            +   +I  F    + T ++    +      L    P    +F  +   TV   F + +I
Sbjct: 99  GVSWFFIWFFRGTPVYTQLVFWGLFAVLIPKLSLGIPFTSIEFWSVDSKTVITAFNAAWI 158

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   AA+++EIVR+GL AV  GQ EAA ALG+   +  R V+LPQAMR IIPP  ++ 
Sbjct: 159 GLALNEAAYLSEIVRAGLEAVDPGQTEAAQALGMKRAQIMRRVVLPQAMRIIIPPTGNET 218

Query: 332 LNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +LK +SL +AV F  +L      I N+  + I ++L+    YL ++ ++ +  +RL  
Sbjct: 219 IGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAAIWYLFITSIMMVLQSRLEK 278

Query: 391 KIA 393
              
Sbjct: 279 HFG 281



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 46/130 (35%), Gaps = 21/130 (16%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87
           + QI+ A+++ ++    ++ +  N  +   ++   +L                       
Sbjct: 21  TGQIVAAVIVALLAAMLLHGLITN-PRFEWNVVWKYLFNER------------------- 60

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F
Sbjct: 61  -VLSGVGYTLLLTVISMVVAIILAVILAIMRKSVNPVLRGVSWFFIWFFRGTPVYTQLVF 119

Query: 148 LYKSVLSVLP 157
                + +  
Sbjct: 120 WGLFAVLIPK 129


>gi|301050727|ref|ZP_07197586.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300297595|gb|EFJ53980.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
          Length = 222

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARGALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|323701355|ref|ZP_08113029.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum nigrificans DSM 574]
 gi|323533614|gb|EGB23479.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum nigrificans DSM 574]
          Length = 223

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 115/223 (51%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           K+  F+ V G ++ L    L++    K    +  LY  T++I G+P L
Sbjct: 15  LPTLLKGAVMTIKLTAFAIVFGTLIGLIV-ALAKISSIKILNWIGGLY--TWVIRGVPLL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y                   +  EF    + LS    A+IAEI+R+G++++ RG
Sbjct: 72  LQLMFLYY-----------GLAFAGIMLDEFTVAVLGLSVCGGAYIAEIIRAGILSIDRG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA+++G+T+ +A R V+LPQA R ++PP+ ++++ L+K+S+L   +   +L+     
Sbjct: 121 QMEAALSMGMTYAQAMRRVILPQAYRRLLPPMGNEFITLMKDSALVSVITMTELLRSATQ 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + + T + +E+ +    +YL ++    +  +RL  K+A+ + K
Sbjct: 181 LQSVTFRPVEVYITAGLLYLIMTTFFTIVFDRLERKLAVSDGK 223



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               +L G V T  L    ++  T+IG +V   ++S+ K++ WI  +Y  V R +P L+ 
Sbjct: 14  ILPTLLKGAVMTIKLTAFAIVFGTLIGLIVALAKISSIKILNWIGGLYTWVIRGVPLLLQ 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           + FLY  +     + D   V   G+
Sbjct: 74  LMFLYYGLAFAGIMLDEFTVAVLGL 98


>gi|225181291|ref|ZP_03734736.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
 gi|225168071|gb|EEG76877.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
          Length = 220

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 117/224 (52%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    LT+  +A   +  F++G V+ L      +    +  + L   YI   +I G 
Sbjct: 14  PFILQGAVLTVQISAVAVLVGFLIGSVVGLV-----KLSSIRPLRFLATAYIE--IIRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I L Y       ++              F +  IALS  + A++ EIVRSG+ ++
Sbjct: 67  PLLVQIVLIYFGLASLNIVSL----------DRFTAGVIALSINSGAYVGEIVRSGIQSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA +LG+ + ++ R ++LPQA R IIPPL ++++ L+K+SSL  A+GFA+L+  
Sbjct: 117 DKGQMEAARSLGMNYVRSMRFIILPQAFRRIIPPLVNEFIMLIKDSSLLFAIGFAELMQR 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I  +T +  E+ +    +Y  ++ +++   + +  +  +++
Sbjct: 177 GNAIRARTYKDFEVFIGIAAVYFVMTFILSRVASYVERRTRIRD 220



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 41/81 (50%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++        IL G V T  ++   ++   +IG++VG  +LS+ + + ++   Y+E+ 
Sbjct: 4   LDFSVVWDNLPFILQGAVLTVQISAVAVLVGFLIGSVVGLVKLSSIRPLRFLATAYIEII 63

Query: 137 RNIPPLVVIFFLYKSVLSVLP 157
           R  P LV I  +Y  + S+  
Sbjct: 64  RGTPLLVQIVLIYFGLASLNI 84


>gi|295401072|ref|ZP_06811046.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976865|gb|EFG52469.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 235

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + V +F +G++L++ AT L+R    K  + +  +Y+S   I G P L
Sbjct: 27  LPLVKGALYYTIPLTVITFAIGLILAI-ATALARISGVKALEIIARIYVSA--IRGTPLL 83

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +                     P F +  I  S    A+ +EIVR+ ++++P+G
Sbjct: 84  VQLFIIFY-----------GLPNIGITIPSFPAAIIGFSLNVGAYASEIVRAAILSIPKG 132

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LG+T  +A R V+ PQA R  IPPL++ +++L+K++SLA  +  +++      
Sbjct: 133 QWEAAYSLGMTTGQALRRVIFPQAARVSIPPLSNTFISLVKDTSLASLILVSEMFRKAQE 192

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I +   + + +      IY  +  ++++  NR+  ++     +
Sbjct: 193 IASTNYEFLLLYTEAAIIYWIICFLLSIVQNRIEERLNRYIAR 235



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 28/80 (35%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L         I+       R+S  K +  I R+YV   R  P LV +F ++  +
Sbjct: 34  LYYTIPLTVITFAIGLILAIATALARISGVKALEIIARIYVSAIRGTPLLVQLFIIFYGL 93

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++            G  LN
Sbjct: 94  PNIGITIPSFPAAIIGFSLN 113


>gi|325261529|ref|ZP_08128267.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. D5]
 gi|324032983|gb|EGB94260.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. D5]
          Length = 230

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 114/231 (49%), Gaps = 16/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +G F+ +    +    +    ++  F+ ++GIV+  F   + R  ++KTGK   L +I 
Sbjct: 9   FYGNFIEDNRWEYILDGLGVTLQVTFFAVIIGIVIG-FLIAIIRSTYDKTGKLKILNFIC 67

Query: 226 ---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I G P +V + + Y + F            GS    + +   +A    + A++A
Sbjct: 68  KIYLTVIRGTPVVVQLLIIYFVIF------------GSADISKVLVAIMAFGFNSGAYVA 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG++++  GQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S++ 
Sbjct: 116 EIFRSGIMSIDNGQFEAGRSLGFNYVQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSG 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   DL   G  I ++T  A   ++    IYL + ++    +N L  ++ 
Sbjct: 176 YIALQDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVMIFTKLVNMLERRLR 226



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVF 136
           + +    IL G   T  + F  +I   +IG L+   R         K++ +IC++Y+ V 
Sbjct: 15  EDNRWEYILDGLGVTLQVTFFAVIIGIVIGFLIAIIRSTYDKTGKLKILNFICKIYLTVI 74

Query: 137 RNIPPLVVIFFLYKSVL 153
           R  P +V +  +Y  + 
Sbjct: 75  RGTPVVVQLLIIYFVIF 91


>gi|83646476|ref|YP_434911.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83634519|gb|ABC30486.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 222

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG  L++      R    +       +YIS F   G 
Sbjct: 14  PFLLKGAGYTVGLSLGGMFFGLILGFTLAMM-----RLSSFRALDWTARVYISFF--RGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + Y   +  P L       G  + P   +  I  S   AA+ AEI+R+ + ++
Sbjct: 67  PLLVQLFMIY---YGLPQL-------GVRLEP-LTAALIGFSLNMAAYAAEILRAAIASI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA ++G+T  +     +LPQA R+ +PPL + +++L+K+++LA  +   +L   
Sbjct: 116 DRGQWEAAASIGMTRTQTLYRTILPQAARTALPPLGNSFISLVKDTALAATIQVPELFRQ 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              I  +T +   + L    IY  L+ ++A   NRL A++ L EK
Sbjct: 176 AQLITARTFEIFTMYLAAALIYWVLASVLAHLQNRLEARVNLHEK 220



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    I+G  +   RLS+ + + W  RVY+  FR  P LV +F +
Sbjct: 16  LLKGAGYTVGLSLGGMFFGLILGFTLAMMRLSSFRALDWTARVYISFFRGTPLLVQLFMI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +       G  LN 
Sbjct: 76  YYGLPQLGVRLEPLTAALIGFSLNM 100


>gi|302874468|ref|YP_003843101.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|307690925|ref|ZP_07633371.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|302577325|gb|ADL51337.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
          Length = 216

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 17/220 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+   A   V    LGI+ +L      +    K    +   Y  T++  G P L
Sbjct: 14  LEGGKITIALTAVTIVIGITLGIIFALM-----KLSKIKVLNLIASFY--TWIFRGTPML 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +     Y   F  P++ +            F++  I L   + A++ EIVRSG+ ++ +G
Sbjct: 67  LQFFFFY---FALPLMWKIEL-------SPFVASMIVLGLNSGAYMTEIVRSGIQSIDKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG T+    + ++LPQ  + IIPPL ++++ +LK++SLA  +   ++++    
Sbjct: 117 QFEAAKALGFTYGDTMKKIILPQTFKVIIPPLGNEFITILKDTSLASTITLTEVLNNAKK 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + N T    E  L     YL L+ +      ++  K+++ 
Sbjct: 177 VANSTFSPAEPYLTAAVFYLFLTTIFTYVFKKIEKKLSVY 216



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 32/82 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L    ++    +G +    +LS  K++  I   Y  +FR  P L+  
Sbjct: 10  LKVVLEGGKITIALTAVTIVIGITLGIIFALMKLSKIKVLNLIASFYTWIFRGTPMLLQF 69

Query: 146 FFLYKSVLSVLPIPDHSIVLPF 167
           FF Y ++  +  I     V   
Sbjct: 70  FFFYFALPLMWKIELSPFVASM 91


>gi|323186798|gb|EFZ72118.1| L-cystine transport system permease protein tcyB [Escherichia coli
           RN587/1]
          Length = 222

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|81429106|ref|YP_396106.1| putative glutamine/glutamate ABC transporter,
           membrane-spanning/substrate-binding subunit precursor
           [Lactobacillus sakei subsp. sakei 23K]
 gi|78610748|emb|CAI55799.1| Putative glutamine/glutamate ABC transporter,
           membrane-spanning/substrate-binding subunit precursor
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 478

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+        F+ + G+   L           K  +A+    I  F   GLP L
Sbjct: 277 LDGLGQTLLLTVIAIFFATIFGVFFGLLG-----VLPNKFARAVSDTVIYIF--RGLPLL 329

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL    Y      P L            P  ++  I L     A+ A  V+ G+ AV  G
Sbjct: 330 VLALFIYT---GIPSLTG-------QKIPAMVAGVITLMFNEGAYTAAFVKGGIGAVSAG 379

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL + KA R V+LPQ +R ++P   +Q++  LK++S+   +G  +L   G  
Sbjct: 380 QMEAARSLGLPYGKAMRRVILPQGIRIMVPSFINQFIITLKDTSILSIIGIVELTQAGKI 439

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           II +  +  +I  +   IYL +  ++      +  ++
Sbjct: 440 IIARNLEGFKIWGMIALIYLIVITLLTWLSKYIERRM 476



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 61/192 (31%), Gaps = 2/192 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           AIL G   T  L    +  ATI G   G   +  NK    +    + +FR +P LV+  F
Sbjct: 275 AILDGLGQTLLLTVIAIFFATIFGVFFGLLGVLPNKFARAVSDTVIYIFRGLPLLVLALF 334

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y  + S+      ++V      + N G             +          L L   + 
Sbjct: 335 IYTGIPSLTGQKIPAMVAGVITLMFNEGAYTAAFVKGGIGAVSAGQMEAARSLGLPYGKA 394

Query: 208 SRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            R      G  +  P       +     +++ I    +L     ++   N  G       
Sbjct: 395 MRRVILPQGIRIMVPSFINQFIITLKDTSILSIIGIVELTQAGKIIIARNLEGFKIWGMI 454

Query: 266 FMSLYIALSCYT 277
            +   I ++  T
Sbjct: 455 ALIYLIVITLLT 466


>gi|295095485|emb|CBK84575.1| L-cystine ABC transporter membrane protein/Diaminopimelate ABC
           transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 222

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 106/236 (44%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG VL+L      R  +    + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAVFTLQLSIGGMFFGLVLGFVLALM-----RMSNIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISVF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 SETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQER 219



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ VFR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFVLALMRMSNIWPVRWLARFYISVFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPAAMIGLSLN 98


>gi|91786312|ref|YP_547264.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91695537|gb|ABE42366.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 273

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-Q 243
              ++ V + ++GIV+ + A  L +       + +  LYI  +++ G P LV +   +  
Sbjct: 71  VTVQLTVIAGLVGIVIGVLA-ALGKISRLPPLRWIASLYI--WVVRGTPLLVQVLFVFLA 127

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P L             +F S  +AL+    A+ AE +RSGL+AVP+GQ+EAA +L
Sbjct: 128 LPTLVPALQL----------SDFSSACVALAFNAGAYNAEAIRSGLLAVPKGQIEAARSL 177

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+       V  PQA +  +PPL +  + LLK+SSLA A+G  +L +VG  I   T Q 
Sbjct: 178 GLSSFFTFIDVTFPQAFKISLPPLVNNTVALLKDSSLAYAIGVVELTNVGNRIQAATFQP 237

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ++    IYL L+ ++      +  +  ++ ++
Sbjct: 238 LPTLVTTAVIYLVLTTVLTQISGAVERRYDVEGRQ 272



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 35/72 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A +   G   T  L     +   +IG L   G++S    + WI  +Y+ V R  P LV +
Sbjct: 62  AQSFAKGTRVTVQLTVIAGLVGIVIGVLAALGKISRLPPLRWIASLYIWVVRGTPLLVQV 121

Query: 146 FFLYKSVLSVLP 157
            F++ ++ +++P
Sbjct: 122 LFVFLALPTLVP 133


>gi|82543614|ref|YP_407561.1| transport system permease protein [Shigella boydii Sb227]
 gi|81245025|gb|ABB65733.1| putative transport system permease protein [Shigella boydii Sb227]
 gi|320184747|gb|EFW59539.1| Cystine ABC transporter, permease protein [Shigella flexneri CDC
           796-83]
 gi|332096720|gb|EGJ01711.1| L-cystine transport system permease protein tcyB [Shigella boydii
           3594-74]
          Length = 222

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF            +S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPILSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D  +    G+ LN
Sbjct: 75  YYGLPQFGIELDPILSAMIGLSLN 98


>gi|157157239|ref|YP_001463222.1| L-cystine ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|157079269|gb|ABV18977.1| L-cystine ABC transporter, permease protein [Escherichia coli
           E24377A]
          Length = 222

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + +  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWMAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWMARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|302539849|ref|ZP_07292191.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302457467|gb|EFL20560.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces himastatinicus ATCC 53653]
          Length = 330

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R     V +      V SV+  P     +    F  +  L    LT+   A + V  F+L
Sbjct: 47  RWFAAAVALLVFAMVVNSVVRNPAFQWAVVGSYFTTSAVLGGLLLTLWLTAVVMVLGFLL 106

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKP 249
           G ++++      R         L   Y+  F     P LV +   +        L    P
Sbjct: 107 GTLVAVM-----RLSANPVLATLSWGYVWIF--RSTPLLVQLLFWFNIGALYPTLGIGVP 159

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              +F  +    +    ++  I L+ + AA+ AE+VR G+++V  GQ +AA ALGL   +
Sbjct: 160 FGPEFITVKTVNLFGPALTAVIGLTLHEAAYAAEVVRGGILSVDSGQTQAAQALGLGRWR 219

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQAMRSI+P   +  +  LK +S+   +   DL+     + NQT Q I ++++
Sbjct: 220 TLRRIVVPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQTYQVIPLLMV 279

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y++++ +++     +    A    +
Sbjct: 280 ATLWYIAVTTVLSAGQFYVERHYARGAAR 308



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 29/52 (55%)

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              M+   ++GTLV   RLSAN ++A +   YV +FR+ P LV + F +   
Sbjct: 97  AVVMVLGFLLGTLVAVMRLSANPVLATLSWGYVWIFRSTPLLVQLLFWFNIG 148


>gi|317048575|ref|YP_004116223.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950192|gb|ADU69667.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 222

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   +      L     T+  +     F  +LG VL+L      R  H      L  
Sbjct: 2   QESLQLVLDSAPFLLKGAVFTLQLSIGGMFFGLILGFVLALM-----RLSHFWPVNWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+S F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYVSIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  + A+ RGQ EAA ++G+T  +  R V+LPQA R+ +PPL + +++L+K++SLA
Sbjct: 104 SESLRGAIAAIERGQWEAAASIGMTPWQTLRRVILPQAARTALPPLGNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASVIYWVMATVLSALQNRLEAHVNRQDRE 220



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    I+G ++   RLS    V W+ R YV +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLILGFVLALMRLSHFWPVNWLARFYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|301018232|ref|ZP_07182747.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300399819|gb|EFJ83357.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 222

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFCLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFCLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|116513461|ref|YP_812367.1| ABC-type amino acid transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092776|gb|ABJ57929.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 247

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 6/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKYQL 244
             + + SF+LG+V++L  T L R   +  G  +   +     +L    P LV + + Y  
Sbjct: 33  ITLAIISFILGLVIALV-TALVRISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVY-- 89

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L     +        F +  I  S  T A+ +E +R+ + +VPR Q EAA ++G
Sbjct: 90  -FGLPYLKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIG 148

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   K  R ++LPQA++  IPPL++ ++ L+K++SLA ++   ++  V   I  +  Q +
Sbjct: 149 MNRGKTLRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQPL 208

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +   +Y     +++     L    +   K+
Sbjct: 209 IMYSLVALVYALFCSVLSWLQGWLEKASSRHSKE 242


>gi|229542708|ref|ZP_04431768.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229327128|gb|EEN92803.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 219

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+       +F FVLG + +LF     +  H KT K +  +Y S F   
Sbjct: 11  YIPFILKGIWVTLKFVFFAILFGFVLGTIFALF-----KISHIKTLKWIGDIYTSIF--R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V + L Y   F  P L  ++          F S  +A    +AA+++EI+R+G+ 
Sbjct: 64  GTPLIVQLMLIY---FAIPQLTGYDIQ-------PFPSAILAFGLNSAAYVSEIIRAGIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EAA ALG+ +    + ++LPQAM++I+P L +++++L K S+L   +G+ DL+
Sbjct: 114 AVDKGQTEAAQALGVPYYLMMKDLILPQAMKNILPALMNEFVSLTKESALVSTIGYLDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +  QT    E +L    IY  L  ++ +   ++  K+   +
Sbjct: 174 RRAQVVGAQTYHNFEPLLFVAAIYWVLVFILTMLGKQVERKMKYSD 219



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   IL G   T    F  ++   ++GT+    ++S  K + WI  +Y  +F
Sbjct: 3   LDFSQIVPYIPFILKGIWVTLKFVFFAILFGFVLGTIFALFKISHIKTLKWIGDIYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV---LPIPDHSIVLPFGM 169
           R  P +V +  +Y ++  +      P  S +L FG+
Sbjct: 63  RGTPLIVQLMLIYFAIPQLTGYDIQPFPSAILAFGL 98


>gi|326203069|ref|ZP_08192935.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
 gi|325986715|gb|EGD47545.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
          Length = 218

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 15/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +                KI   + ++G+V+ L  T + R    K        Y+
Sbjct: 1   MKYDWSILIEKFPIFLPAAFETLKITAAAIIVGLVIGLL-TSMCRISKIKLIYYPATFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  L+ G P L+ + + Y              +        + S  IA   +  A+I+EI
Sbjct: 60  N--LVRGTPILLQLFIVYY------------GLTDIVNLSAYPSAIIAFGLHNGAYISEI 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  + ++ RGQ EAA ++G++  +A   ++LPQA++  +PPL +Q++   K+SSLA AV
Sbjct: 106 FRGAIKSIDRGQFEAARSIGMSKFRAMYRIILPQALKRAVPPLGNQFIIATKDSSLASAV 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     + + T + +E  LI    Y  ++ ++  F+++L  ++A+ ++
Sbjct: 166 TVKELLLKSQQMGSSTFRFMEYFLIAGIYYFIMTSILGFFVHKLEKRLAVSDR 218



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 36/88 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L     T  +  + +I   +IG L    R+S  KL+ +    YV + R  P L+ +F +
Sbjct: 15  FLPAAFETLKITAAAIIVGLVIGLLTSMCRISKIKLIYYPATFYVNLVRGTPILLQLFIV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  +  ++ +  +   +      N   +
Sbjct: 75  YYGLTDIVNLSAYPSAIIAFGLHNGAYI 102


>gi|28379592|ref|NP_786484.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254557736|ref|YP_003064153.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300769532|ref|ZP_07079418.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308181822|ref|YP_003925950.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28272432|emb|CAD65356.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254046663|gb|ACT63456.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300492947|gb|EFK28129.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308047313|gb|ADN99856.1| amino acid ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 235

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 8/212 (3%)

Query: 189 IFVFSFVLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           I + SF+LG++L++F   +   +R       KA+   Y+  F     P LV + + Y   
Sbjct: 26  IAIISFILGLILAIFTALVKISTRRGWFLILKAIANFYVWLF--RSTPLLVQLFIVY--- 80

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P L              + +     S  T A+ AE +R+ ++++P+GQ EAA ++G+
Sbjct: 81  FGLPYLKIKGLFPNGVQLDPWTAGIATFSLNTGAYCAETIRAAILSIPQGQWEAAYSIGM 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +  + ++LPQA R  +PPL++ +++L+K++SLA ++   ++  V   I  Q  Q + 
Sbjct: 141 TKSQVLKRIILPQAARVSLPPLSNSFISLVKDTSLAASITIIEMFEVSQQIAAQNYQPLV 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  +   +Y  L  +++     L  + +   +
Sbjct: 201 MYSLVAALYAILCTILSWLQGYLEKRTSRYLR 232


>gi|317153669|ref|YP_004121717.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943920|gb|ADU62971.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 335

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/197 (29%), Positives = 100/197 (50%), Gaps = 5/197 (2%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
             GIVL LF   L+R       K   + YI   LI G P LV + + Y +     ++   
Sbjct: 141 AFGIVLGLFTG-LARISSNPCLKWSAITYIE--LIRGSPLLVQLLIAYYV--IGTLINNL 195

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
               G    P       +L+ +  A++AEIVR+G+ ++ +GQ EAA +LG+T   A R +
Sbjct: 196 LVNAGLPQVPGMWFGIASLAIFAGAYVAEIVRAGIQSIHKGQSEAARSLGMTKAMAMRKI 255

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R I+PPL  Q+++L+K+SSL   +   +L       +  +    E+  +   +Y
Sbjct: 256 ILPQAFRRILPPLAGQFISLIKDSSLLGVIAIRELTKATREAVTTSLMPYELYFVCGLMY 315

Query: 375 LSLSIMIALFMNRLNAK 391
           L ++  +++F+  L  +
Sbjct: 316 LLVTFSLSMFVQYLEKR 332



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +    ++G   G  R+S+N  + W    Y+E+ R  P LV +   Y  
Sbjct: 128 GMLITIEISIIAIAFGIVLGLFTGLARISSNPCLKWSAITYIELIRGSPLLVQLLIAYYV 187

Query: 152 V 152
           +
Sbjct: 188 I 188


>gi|300717206|ref|YP_003742009.1| L-cystine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299063042|emb|CAX60162.1| L-cystine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 222

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L++      R  H      L  
Sbjct: 2   QESIQLVLDSAPFLLKGAVFTLQLSIGGMFFGLLLGFILAMM-----RLSHFWPISWLSR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+S F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  CYVSIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  + ++ RGQ EAA ++G+T  +  R V+LPQA R+ +PPL + +++L+K++SLA
Sbjct: 104 SESLRGAIASIERGQWEAASSIGMTRWQTMRRVILPQAARTALPPLGNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ ++++  ++L  ++  ++++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSILQSKLEDRVNRQDRE 220



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G ++   RLS    ++W+ R YV +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLLLGFILAMMRLSHFWPISWLSRCYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|150389461|ref|YP_001319510.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
 gi|149949323|gb|ABR47851.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
          Length = 217

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 111/234 (47%), Gaps = 17/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L+    T+       +     G+ L+L      R       K     
Sbjct: 1   MDFGFLTKYYGMYLTGARNTLLLAFFTVLLGVFFGVALALM-----RLSKNPILKGFAAS 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI    I G P LV + + Y   +  P L    F       P+  +  +AL+  +AA+IA
Sbjct: 56  YIEF--IRGTPLLVQLLIIY---YGLPHLTGMRF-------PDLFAGIVALTFNSAAYIA 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+++V +GQMEAA +LG+ H  A + +++PQA ++I+P L ++++ ++K S++  
Sbjct: 104 EIIRAGIMSVDKGQMEAARSLGMPHSMAMKHIIIPQAFKNILPALGNEFIVVIKESAIVS 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G +D++     +   T +  E +++   +Y  ++  ++  M  +  ++   +
Sbjct: 164 IIGISDIMRTATIVRGNTYRPFEPLIVAAVMYFMITFTLSNLMRMMERRLRASD 217



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G  NT  LAF  ++     G  +   RLS N ++      Y+E  R  P LV 
Sbjct: 9   YYGMYLTGARNTLLLAFFTVLLGVFFGVALALMRLSKNPILKGFAASYIEFIRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPI 158
           +  +Y  +  +  +
Sbjct: 69  LLIIYYGLPHLTGM 82


>gi|299068866|emb|CBJ40107.1| putative amino acid transmembrane ABC transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 262

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 114/215 (53%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-Q 243
           T  K+ + S + G++L + A  L +       +     YI  ++I G P LV I   +  
Sbjct: 60  TTVKLTLASALAGVLLGVVA-ALGKLSPVSLLRQAASFYI--WVIRGTPLLVQILFVFLA 116

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P L             +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +L
Sbjct: 117 LPAWLPWLQ----------MDDFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSL 166

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+       V+ PQA +  +PPL + +++LLK+SSLA A+G  +L +VG  +   T Q 
Sbjct: 167 GLSRWHTFADVIFPQAFKVALPPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQP 226

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ++    IYL+L+ ++  F N +  ++ ++ ++
Sbjct: 227 LPALVTTAVIYLALTTVLTQFSNAVEQRMDVEGRR 261



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A     G   T  L  +  +   ++G +   G+LS   L+      Y+ V R  P LV I
Sbjct: 51  AQIFADGTRTTVKLTLASALAGVLLGVVAALGKLSPVSLLRQAASFYIWVIRGTPLLVQI 110

Query: 146 FFLYKSVLSVLPI 158
            F++ ++ + LP 
Sbjct: 111 LFVFLALPAWLPW 123


>gi|296453673|ref|YP_003660816.1| Fis family transcriptional regulator [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296183104|gb|ADG99985.1| transcriptional regulator, Fis family [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 331

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+      +  ++  P       +    N   L     T++      V + +L +
Sbjct: 29  VAAVIVVLLAAMLIQGLITNPRLDWPTVWKYLFNENVLEGIRYTLELTVISMVVAIILSV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 89  ILAIM-----RKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGLFAVLIPKISLGIPFTSV 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
           F YL ++ ++ +  +RL A   
Sbjct: 264 FWYLLITSILMVVQSRLEAHFG 285



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+ A+++ ++    +  +  N  + +      +L                        +L
Sbjct: 28  IVAAVIVVLLAAMLIQGLITN-PRLDWPTVWKYLFNEN--------------------VL 66

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F   
Sbjct: 67  EGIRYTLELTVISMVVAIILSVILAIMRKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGL 126

Query: 151 SVLSVLP 157
             + +  
Sbjct: 127 FAVLIPK 133


>gi|17548701|ref|NP_522041.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17430949|emb|CAD17631.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 262

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 114/215 (53%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-Q 243
           T  K+ + S + G++L + A  L +       +     YI  ++I G P LV I   +  
Sbjct: 60  TTVKLTLASALAGVLLGIVA-ALGKLSPVSLLRQAASFYI--WVIRGTPLLVQILFVFLA 116

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P L             +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +L
Sbjct: 117 LPAWLPWLQ----------MDDFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSL 166

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+       V+ PQA +  +PPL + +++LLK+SSLA A+G  +L +VG  +   T Q 
Sbjct: 167 GLSRWHTFADVIFPQAFKVALPPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQP 226

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ++    IYL+L+ ++  F N +  ++ ++ ++
Sbjct: 227 LPALVTTAVIYLALTTVLTQFSNAVEQRMDVEGRR 261



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A     G   T  L  +  +   ++G +   G+LS   L+      Y+ V R  P LV I
Sbjct: 51  AQIFADGTRTTVKLTLASALAGVLLGIVAALGKLSPVSLLRQAASFYIWVIRGTPLLVQI 110

Query: 146 FFLYKSVLSVLPI 158
            F++ ++ + LP 
Sbjct: 111 LFVFLALPAWLPW 123


>gi|281355806|ref|ZP_06242300.1| polar amino acid ABC transporter, inner membrane subunit
           [Victivallis vadensis ATCC BAA-548]
 gi|281318686|gb|EFB02706.1| polar amino acid ABC transporter, inner membrane subunit
           [Victivallis vadensis ATCC BAA-548]
          Length = 239

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 116/234 (49%), Gaps = 16/234 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F+ +    +      T   I   + +LG++L  F   + R  H+KTGK   L ++ 
Sbjct: 19  FYLNFIKDDRWRYLWDGFWTTIGISFAAVLLGVLLG-FTVAVIRSTHDKTGKLRLLNWLC 77

Query: 226 ---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I G P +V + + Y + F            GS    + +   +A    + A++A
Sbjct: 78  KLYLTVIRGTPVVVQLLIIYFVIF------------GSVNISKILVAIVAFGVNSGAYVA 125

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R G++++ +GQ EA  +LGL++ +    ++LPQA ++++P L ++++ LLK +S++ 
Sbjct: 126 EIIRGGIMSIDKGQFEAGRSLGLSYIQTMIYIILPQAFKNVLPALGNEFIVLLKETSVSG 185

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   DL   G  I +QT  A   ++    IYL++ +  +  + +L  ++   E
Sbjct: 186 YIALQDLTKGGDIIRSQTYTAFMPLIAVALIYLAVVMQFSWLLGKLERRLKNNE 239



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRNIP 140
              +  GF  T  ++F+ ++   ++G  V   R +       +L+ W+C++Y+ V R  P
Sbjct: 29  WRYLWDGFWTTIGISFAAVLLGVLLGFTVAVIRSTHDKTGKLRLLNWLCKLYLTVIRGTP 88

Query: 141 PLVVIFFLYKSVL 153
            +V +  +Y  + 
Sbjct: 89  VVVQLLIIYFVIF 101


>gi|224477394|ref|YP_002635000.1| hypothetical protein Sca_1909 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422001|emb|CAL28815.1| hypothetical protein SCA_1909 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 235

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 118/223 (52%), Gaps = 4/223 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      +  +  I + +FVLG++++LF T L R    K  + +  +Y+S  +I G P 
Sbjct: 16  FLPMLGGLIKYSIPITLVTFVLGLIIALF-TALMRISTSKILRGIARVYVS--IIRGTPM 72

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V + + +    +   L   N     T+ P  ++  I LS    A+ +EI+R G+I++P+
Sbjct: 73  IVQLFIIFYGLPELGRLVTNNPDTQWTL-PSVVAAIIGLSLNVGAYASEIIRGGIISIPK 131

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G+ +R+  + ++LPQA+R  +P L + +L+LLK++SL   +  A++     
Sbjct: 132 GQSEAAYSIGMNYRQTIQRIILPQAIRVSVPALGNTFLSLLKDTSLLGFILVAEMFRKAQ 191

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + + T + + I ++   +Y  +  +I++  +   + +    +
Sbjct: 192 EVASTTYEYLTIYILVALLYWVVCFIISVIQSFYESYLERGYR 234



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 42/103 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 27  SIPITLVTFVLGLIIALFTALMRISTSKILRGIARVYVSIIRGTPMIVQLFIIFYGLPEL 86

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  ++    + +      +   +L +   A   +   ++ I
Sbjct: 87  GRLVTNNPDTQWTLPSVVAAIIGLSLNVGAYASEIIRGGIISI 129


>gi|160895808|ref|YP_001561390.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160361392|gb|ABX33005.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 260

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 12/214 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + S   G+VL + A  L+R       +     Y+    I G P LV I   Y  
Sbjct: 58  TTLYLTLVSGAAGLVLGIAA-ALARTSRTAALRWAAGFYVWA--IRGTPLLVQILFIY-- 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PVL            P+F +  IAL+    A+ AE VR+GL AVPRGQ EAA ALG
Sbjct: 113 -FALPVLIP------GLNLPDFAAACIALALNVGAYNAEAVRAGLQAVPRGQAEAARALG 165

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L        V+ PQA +  +PPL S ++ LLK+SSLA A+G  +L +VG  I + T Q +
Sbjct: 166 LPRICVFMDVVFPQAFKISLPPLVSNFVALLKDSSLAYAIGVVELTNVGNRIQSATFQPV 225

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E ++     YL L+ ++      +  +  ++ + 
Sbjct: 226 ETLVTVGVTYLVLTTLVTQVTAAVEYRFDVEGRH 259



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               S A     G   T +L         ++G      R S    + W    YV   R  
Sbjct: 43  EPIGSNADTFAEGARTTLYLTLVSGAAGLVLGIAAALARTSRTAALRWAAGFYVWAIRGT 102

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV I F+Y ++  ++P
Sbjct: 103 PLLVQILFIYFALPVLIP 120


>gi|320011626|gb|ADW06476.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 288

 Score =  157 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    ++V+  L  +++SV+        +       +  L    LT+     + V  F L
Sbjct: 35  RWAAAVLVLLLLAGALVSVVRNDAFQWDVVGAYLTTDSVLRGLGLTLWLTGLVMVLGFAL 94

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G +L++      R    +  +A+   YI  F     P LV +   + +    P   Q   
Sbjct: 95  GTLLAVL-----RLSGNRVLQAVSWGYIWLF--RSTPILVQLLFWFNIGALYP---QILG 144

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +    +        I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL   +  R ++L
Sbjct: 145 VSTVNLLGPVTVAVIGLTLHEAAYAAEVVRGGILSVERGQLEAAQSLGLGPWRRLRRIVL 204

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQAMRSI+PP  +  +  LK +S+   +   DL+     + ++T + I ++L+    Y++
Sbjct: 205 PQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYEVIPLLLVATLWYVA 264

Query: 377 LSIMIALFMNRLNAKIALK 395
           ++ +++L    +    A  
Sbjct: 265 VTSLLSLGQYYVERHYARG 283



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           M+    +GTL+   RLS N+++  +   Y+ +FR+ P LV + F +        I   S 
Sbjct: 88  MVLGFALGTLLAVLRLSGNRVLQAVSWGYIWLFRSTPILVQLLFWFNIGALYPQILGVST 147

Query: 164 VLPFG 168
           V   G
Sbjct: 148 VNLLG 152


>gi|304317591|ref|YP_003852736.1| polar amino acid ABC transporter inner membrane protein
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302779093|gb|ADL69652.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 220

 Score =  157 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +        +        +    ++ + S  +G VL L    L +    K    +   Y+
Sbjct: 1   MNLDFSSMPQYTQLFINGVIMTIELTLISVAIGAVLGLIV-ALMKMSSVKVISFIGSAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P LV I + Y        L QF         P F+   IALS  +A ++AEI
Sbjct: 60  E--IIRGTPLLVQILIIYN------GLPQFG-----IKFPGFVVGIIALSMNSAGYVAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ AV  GQMEA+ +LG++H  A R V++PQA+++I+P L ++++ +LK SS+   +
Sbjct: 107 IRSGIQAVDPGQMEASRSLGMSHSMAMRYVIIPQAIKNILPALGNEFVVMLKESSIVSVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           GFADL      + + T +A E ++I   IY  ++++ +  +++   ++   + +
Sbjct: 167 GFADLTRQAEIVSSVTYRAFEPLIIIAAIYFIMTLVFSRLLSKFERRLRSGDTR 220



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 47/111 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++S   Y    + G + T  L    +    ++G +V   ++S+ K++++I   YVE+ 
Sbjct: 3   LDFSSMPQYTQLFINGVIMTIELTLISVAIGAVLGLIVALMKMSSVKVISFIGSAYVEII 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R  P LV I  +Y  +          +V    + +N+ G     +     A
Sbjct: 63  RGTPLLVQILIIYNGLPQFGIKFPGFVVGIIALSMNSAGYVAEIIRSGIQA 113


>gi|168184995|ref|ZP_02619659.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|182671932|gb|EDT83893.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
          Length = 228

 Score =  157 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K  K + + YI    I G P LV + + Y       +      I GS   P+F +  +A
Sbjct: 46  NKILKYIAVSYIEF--IRGTPVLVQLYIIYYGLPTIGIRFPEVPILGSNF-PDFFAGILA 102

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS  + A++AEI+R+G+ AV +GQMEAA +LG++   A + V++PQA ++I+P L ++++
Sbjct: 103 LSINSGAYVAEIIRAGIQAVDKGQMEAARSLGMSESMAMKNVIIPQAFKNILPALGNEFI 162

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++K SS+   +G  +L+    T+     +  E +L+   +Y  ++  ++  +     ++
Sbjct: 163 TIIKESSIVSIIGIHELMYNADTVRGNIFRPFEPLLVAAVMYFIMTFTLSKLLGVAERRM 222

Query: 393 ALKEK 397
            + ++
Sbjct: 223 RVSDR 227


>gi|302542601|ref|ZP_07294943.1| ABC-type amino acid transport system, permease component
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302460219|gb|EFL23312.1| ABC-type amino acid transport system, permease component
           [Streptomyces himastatinicus ATCC 53653]
          Length = 312

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 5/256 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV   +   ++      D +       F +   L     T+       V    LGIVL++
Sbjct: 36  VVAIAVLAMLVYAFAKGDVNWAAIPDYFFDGEVLKGVRNTIWITILSMVLGVALGIVLAV 95

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R        ++   YI  F    +   +L+     L F    +        S  
Sbjct: 96  M-----RLSKNPVTSSIAWGYIWFFRGTPVYVQLLVWFNLGLVFKYINIMPIYKDEWSDF 150

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F++  + L    AA++AEI R+G+ +V  GQ EAA ALG++H K  R V+LPQAMR 
Sbjct: 151 MTPFLAALLGLGLNEAAYMAEICRAGIQSVDEGQTEAAQALGMSHAKTLRRVVLPQAMRV 210

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PP  ++++N+LK +SL +AV + DL+     +   +G   E++ +    YL L+ +++
Sbjct: 211 IVPPTGNEFINMLKTTSLVIAVQYWDLLQATSEVGQNSGATAEMLFLAAAWYLILTSVLS 270

Query: 383 LFMNRLNAKIALKEKK 398
           +    L    A    +
Sbjct: 271 VGQYYLERYYARGTSR 286



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP---LVVIF 146
           L G  NT W+    M+    +G ++   RLS N + + I   Y+  FR  P    L+V F
Sbjct: 69  LKGVRNTIWITILSMVLGVALGIVLAVMRLSKNPVTSSIAWGYIWFFRGTPVYVQLLVWF 128

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFL 171
            L      +  +P +       M  
Sbjct: 129 NLGLVFKYINIMPIYKDEWSDFMTP 153


>gi|229551204|ref|ZP_04439929.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315496|gb|EEN81469.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 498

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               ++    TM        F+  +GI++ L           +  + +   +I  F   G
Sbjct: 293 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLG-----VLPNRFARGVATTFIYIF--RG 345

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         +  P F++  I L+    A+ A  V+ G+ A
Sbjct: 346 LPLLVLALFIYT---GVPSLIG-------SKIPAFVAGIITLTLNEGAYTAAFVKGGIQA 395

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 396 VDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQ 455

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            G  II +  +  +I  +   IYL +  ++    N +  ++ +
Sbjct: 456 TGKIIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQRRMEV 498



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +    +  AT +G LVG   +  N+    +   ++ +FR +P LV+ 
Sbjct: 293 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLGVLPNRFARGVATTFIYIFRGLPLLVLA 352

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 353 LFIYTGVPSL 362


>gi|163841189|ref|YP_001625594.1| glutamine transport permease protein [Renibacterium salmoninarum
           ATCC 33209]
 gi|162954665|gb|ABY24180.1| glutamine transport permease protein [Renibacterium salmoninarum
           ATCC 33209]
          Length = 357

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 103/206 (50%), Gaps = 13/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V SF   ++L LF   L +       + +   +++ F   G P LV     +  +F
Sbjct: 163 LLVTVISFAFAMLLGLFFGFL-KVSQNIVLRGVATTFVNIF--RGTPLLVQ---AFFFYF 216

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L              +++  + L+  + A++ EIVR GL +V  GQ+EA+ +LGL 
Sbjct: 217 GIPQLTG-------QPINIWVAGVLTLALNSGAYVTEIVRGGLQSVDPGQLEASRSLGLG 269

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +  + R V++PQA + + P L +Q + LLK+SSL +A+GFA+L+  G  I + + +  E 
Sbjct: 270 YLTSMRKVVVPQAFKIMTPSLINQLVILLKDSSLLMAIGFAELLYQGQQIYSNSFRISET 329

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +LI   +Y  + +      N ++ + 
Sbjct: 330 LLIVAVMYFIVIMARTKLSNIVDKRF 355



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G  NT  +       A ++G   G  ++S N ++  +   +V +FR  P LV  FF
Sbjct: 154 ALLSGLGNTLLVTVISFAFAMLLGLFFGFLKVSQNIVLRGVATTFVNIFRGTPLLVQAFF 213

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  +  +   P +  V
Sbjct: 214 FYFGIPQLTGQPINIWV 230


>gi|161502926|ref|YP_001570038.1| hypothetical protein SARI_00985 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864273|gb|ABX20896.1| hypothetical protein SARI_00985 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 222

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG VL+L      R       + L   YIS F   G 
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFVLALM-----RMSPLWPVRWLARFYISIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  + + Y        L QF             +  I LS  TAA+ +E +R+ + A+
Sbjct: 66  PLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +     +LPQA R  +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTLHRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 175 AQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 43/101 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|23335783|ref|ZP_00121016.1| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189439798|ref|YP_001954879.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|312133204|ref|YP_004000543.1| hism6 [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482550|ref|ZP_07941565.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|189428233|gb|ACD98381.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|291517267|emb|CBK70883.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|311772405|gb|ADQ01893.1| HisM6 [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915972|gb|EFV37379.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 331

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+      +  ++  P       +    N   L     T++      V + +L +
Sbjct: 29  VAAVIVVLLAAMLIQGLITNPRLDWPTVWKYLFNENVLEGIRYTLELTVISMVVAIILSV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 89  ILAIM-----RKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGLFAVLIPKISLGIPFTSV 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
           F YL ++ ++ +  +RL A   
Sbjct: 264 FWYLLITSILMVVQSRLEAHFG 285



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+ A+++ ++    +  +  N  + +      +L                        +L
Sbjct: 28  IVAAVIVVLLAAMLIQGLITN-PRLDWPTVWKYLFNEN--------------------VL 66

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F   
Sbjct: 67  EGIRYTLELTVISMVVAIILSVILAIMRKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGL 126

Query: 151 SVLSVLP 157
             + +  
Sbjct: 127 FAVLIPK 133


>gi|318060272|ref|ZP_07978995.1| arginine/ornithine transport permease [Streptomyces sp. SA3_actG]
          Length = 347

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 9/275 (3%)

Query: 130 RVYVEVFRNIPPL----VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
               E  R +P       V   +  + L+ L        + +G   +          +  
Sbjct: 51  TAPAEAIRAVPVRHYGRWVAALVSLAALAALIYAFSQGKINWGAVPDYFFDDRILSGLGK 110

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
              + V + V+GI   +    + R        ++   YI  F   G P LV + + + L 
Sbjct: 111 TMLLTVVAMVIGIAGGVVL-AVMRLSKNPVTSSIAWFYIWFF--RGTPVLVQLMVWFNLG 167

Query: 246 --FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F+   LG       S+     ++  + L    AA++AEI R+GL+AV  GQ EAA AL
Sbjct: 168 LVFEYINLGPLYKDYWSSFMTPLLTALLGLGLNEAAYMAEICRAGLLAVDEGQTEAAHAL 227

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++H K  R +++PQAMR I+PP  ++ +N+LK +SL  AV + +L+     I   +G  
Sbjct: 228 GMSHAKTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVAAVQYPELLRAAQDIGQVSGAP 287

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +E++ +    YL L+ ++++    +    A    +
Sbjct: 288 VEMLFLAAAWYLILTSVLSIGQFYIERYYARGSSR 322



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     IL G   T  L    M+     G ++   RLS N + + 
Sbjct: 83  YAFSQGKINWGAVPDYFFDDRILSGLGKTMLLTVVAMVIGIAGGVVLAVMRLSKNPVTSS 142

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVL 153
           I   Y+  FR  P LV +   +   L
Sbjct: 143 IAWFYIWFFRGTPVLVQLMVWFNLGL 168


>gi|303325414|ref|ZP_07355857.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
 gi|302863330|gb|EFL86261.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
          Length = 267

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 15/231 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
                 R L +    +    KI V S    + L L    L R    +    L   Y+   
Sbjct: 52  WPDPYLRILLYLPDGVVVTFKITVMSICCAVPLGLLTG-LGRISRNRAINLLASTYVE-- 108

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P LV +   Y        L +F  I G T      S  IA+S    A++ E+ R+
Sbjct: 109 VIRGIPLLVQLFYIYY------ALSRFFQISGIT------SAVIAISVCYGAYMGEVFRA 156

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++A+ +GQ EAA +LG    +    V+LPQA R+I+PP+ ++ + +LK++SL   +   
Sbjct: 157 GIMAISKGQSEAARSLGFNRFQTMFYVVLPQAWRTILPPVGNECIAMLKDTSLVSIMAVP 216

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           D++    + +  T    E   +   IYL +++ ++  ++ + +++   + K
Sbjct: 217 DIMQRARSFVGTTYLYFETYTVIALIYLIITLALSKAVSIMESRLNYYDGK 267



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 83  SSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
             Y   +L    G V TF +    +  A  +G L G GR+S N+ +  +   YVEV R I
Sbjct: 54  DPYLRILLYLPDGVVVTFKITVMSICCAVPLGLLTGLGRISRNRAINLLASTYVEVIRGI 113

Query: 140 PPLVVIFFLYKSVLSVL 156
           P LV +F++Y ++    
Sbjct: 114 PLLVQLFYIYYALSRFF 130


>gi|319440318|ref|ZP_07989474.1| putative ABC transport system, permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 323

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 108/236 (45%), Gaps = 4/236 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             +  +++    S           + V +  +GI+L      L R       +    +Y+
Sbjct: 50  YGWDTYVDYLFDSRIAEAALHTLALTVLAMAIGIILGAVMAVL-RMSPNPVMRGFSWVYL 108

Query: 225 STFLIFGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             F    +   LV   L   ++    V      + G  +   F+  ++ L    +A++AE
Sbjct: 109 WIFRGTPVYVQLVFWGLLGSIYHSISVGFAEVSVEG-FLKNFFVLAFVGLGLNESAYMAE 167

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR+G+ +VP GQ EA+ ALG+T  +  R  +LPQAMR IIPP  ++ +++LK +SL +A
Sbjct: 168 IVRAGVQSVPEGQTEASKALGMTWWQTMRRTVLPQAMRIIIPPTGNELISMLKTTSLVIA 227

Query: 344 VGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V +A ++      I       + ++L+    YL+++ ++ +  + L    +    +
Sbjct: 228 VPYAGEIYGRSTDIAYAMFDPVPMLLVAATWYLAITSILMVGQHYLEKYYSRGSSR 283



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
              V Y  DS  A A L    +T  L    M    I+G ++   R+S N ++     VY+
Sbjct: 53  DTYVDYLFDSRIAEAAL----HTLALTVLAMAIGIILGAVMAVLRMSPNPVMRGFSWVYL 108

Query: 134 EVFRNIPPLVVIFFLY 149
            +FR  P  V + F  
Sbjct: 109 WIFRGTPVYVQLVFWG 124


>gi|28900676|ref|NP_800331.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365550|ref|ZP_05778087.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260877614|ref|ZP_05889969.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260895965|ref|ZP_05904461.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260901646|ref|ZP_05910041.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28809056|dbj|BAC62164.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308085227|gb|EFO34922.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090547|gb|EFO40242.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308108934|gb|EFO46474.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308114332|gb|EFO51872.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
          Length = 265

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 19/250 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+      G +     +    +T++ +A    F+ VLG+V +L      
Sbjct: 34  MGYQWQWERVPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL----- 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K G  +   Y+   +I   P LV I L Y +             G       F +
Sbjct: 89  RLSDSKVGNVIGTTYVE--VIRNTPLLVQIYLLYFVF------------GPVIGLDRFST 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AEI R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT
Sbjct: 135 AVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL +    I+++T    EI      IYL+L++ ++     L
Sbjct: 195 NEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWL 254

Query: 389 NAKIALKEKK 398
             K+    +K
Sbjct: 255 EHKLGASWRK 264



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 1/97 (1%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVG 115
           L  G   +  +  +E     + +  D  +  A ++ G + T  ++   +    ++G +  
Sbjct: 27  LDSGADAMGYQWQWERVPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTA 86

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             RLS +K+   I   YVEV RN P LV I+ LY   
Sbjct: 87  LLRLSDSKVGNVIGTTYVEVIRNTPLLVQIYLLYFVF 123


>gi|314935665|ref|ZP_07843017.1| amino acid ABC transporter, permease protein [Staphylococcus
           hominis subsp. hominis C80]
 gi|313656230|gb|EFS19970.1| amino acid ABC transporter, permease protein [Staphylococcus
           hominis subsp. hominis C80]
          Length = 241

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 36  ITIVTFILGLIIALF-TALMRISSSKVSRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 92

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   N     T+    +S  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ +R
Sbjct: 93  GRLITGNADEQWTL-SSVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYR 151

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  +P L + +L L+K++SL   +  A++      + + T +   I +
Sbjct: 152 QTIQRIILPQAIRVSVPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTTYEYFTIYI 211

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      + I    K
Sbjct: 212 LVAVMYWVVCFIISVIQGFYESYIERGYK 240



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   II       R+S++K+   I RVYV + R  P +V +F ++  +  +
Sbjct: 33  SIPITIVTFILGLIIALFTALMRISSSKVSRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 92

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +   +    + +      +   +L +   A   +   ++ I
Sbjct: 93  GRLITGNADEQWTLSSVVSAIIGLSLNVGAYASEIIRGGIISI 135


>gi|229815591|ref|ZP_04445918.1| hypothetical protein COLINT_02642 [Collinsella intestinalis DSM
           13280]
 gi|229808821|gb|EEP44596.1| hypothetical protein COLINT_02642 [Collinsella intestinalis DSM
           13280]
          Length = 463

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 117/249 (46%), Gaps = 20/249 (8%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNR-----GLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +K+ L   P  +      F     N       L         +  I + +F L I    F
Sbjct: 196 FKAFLEEQPWVEVWNSNTFLRLFFNPVLIVSSLPIIFGGFLMSVAIVLVAFPLAIPFG-F 254

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L R    +  +AL  +Y++  LI G P  + I + +   F  P+             
Sbjct: 255 LFALMRISKSRILRALAAVYVN--LIRGTPAFLQIYIAF---FGLPL--------AGVNI 301

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             +    I ++  +AA++ EI R+G+ ++P+GQ EAA +LG++  +    +++PQ  R++
Sbjct: 302 DNYTLGVIVMAMNSAAYLCEIFRAGIQSIPKGQSEAARSLGMSAAQTMVSIIIPQTFRNV 361

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IP LTS+++ L K++SL  AVG  ++V    TI+  TG +I   ++    YL +++ +A 
Sbjct: 362 IPTLTSEFILLYKDTSLLAAVGVMEIVMYAKTIVATTG-SITPYVVAALFYLVVTLPLAR 420

Query: 384 FMNRLNAKI 392
            ++ L  ++
Sbjct: 421 VVSLLELRL 429



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF+ +  +       A   G L    R+S ++++  +  VYV + R  P  + I+  
Sbjct: 231 IFGGFLMSVAIVLVAFPLAIPFGFLFALMRISKSRILRALAAVYVNLIRGTPAFLQIYIA 290

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  +       D+  +    M +N
Sbjct: 291 FFGLPLAGVNIDNYTLGVIVMAMN 314


>gi|325125097|gb|ADY84427.1| Amino acid ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 247

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 6/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKYQL 244
             + + SF+LG++++L  T L R   +  G  +   +     +L    P LV + + Y  
Sbjct: 33  ITLAIISFILGLIIALV-TALVRISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVY-- 89

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L     +        F +  I  S  T A+ +E +R+ + +VPR Q EAA ++G
Sbjct: 90  -FGLPYLKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIG 148

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   K  R ++LPQA++  IPPL++ ++ L+K++SLA ++   ++  V   I  +  Q +
Sbjct: 149 MNRGKTLRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQPL 208

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +   +Y     +++     L    +   K+
Sbjct: 209 IMYSLVALVYALFCSVLSWLQGWLEKASSRHSKE 242


>gi|296111214|ref|YP_003621595.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832745|gb|ADG40626.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 482

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 17/217 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+       + + V GI+L +              +   L  +ST LI+    
Sbjct: 280 FLKGLWQTVLLTVVAIILASVWGILLGIMG----------VSQNTGLRGLSTTLIYIFRG 329

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+ L + ++   P +            P F +  I L     A+ A  VR G  AV R
Sbjct: 330 LPLMVLAFFIYIGLPSVIGMKI-------PAFTAGLITLILNEGAYTAAFVRGGFEAVDR 382

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL++ K+ R V++PQ ++ +IP   +Q++  LK++S+  A+G  +L   G 
Sbjct: 383 GQMEAARSLGLSYSKSMRKVIVPQGLKIMIPSFINQFIITLKDTSILSAIGILELTQTGS 442

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I+++  Q   +  I   IYL +  ++    N +  +
Sbjct: 443 LIVSRNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKR 479



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 37/71 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  L    +I A++ G L+G   +S N  +  +    + +FR +P +V+ FF
Sbjct: 279 AFLKGLWQTVLLTVVAIILASVWGILLGIMGVSQNTGLRGLSTTLIYIFRGLPLMVLAFF 338

Query: 148 LYKSVLSVLPI 158
           +Y  + SV+ +
Sbjct: 339 IYIGLPSVIGM 349


>gi|77456471|ref|YP_345976.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380474|gb|ABA71987.1| Diaminopimelate ABC transporter membrane protein / L-cystine ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 221

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 96/193 (49%), Gaps = 13/193 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K+   L  +Y+S F   G P LV + + Y   +  P L              
Sbjct: 41  ALMRLSRFKSVSWLARIYVSFF--RGTPLLVQLFVIY---YGLPQL--------GMELDP 87

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  +  R  +LPQAMR+ +P
Sbjct: 88  LPAALIGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQTLRRAILPQAMRTALP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ +++ F 
Sbjct: 148 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEVFTMYLAAALIYWILATVLSHFQ 207

Query: 386 NRLNAKIALKEKK 398
           N+L  ++   +++
Sbjct: 208 NKLEERVNRHDQE 220



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RLS  K V+W+ R+YV  FR  P LV +F +
Sbjct: 15  LLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKSVSWLARIYVSFFRGTPLLVQLFVI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G  LN 
Sbjct: 75  YYGLPQLGMELDPLPAALIGFSLNM 99


>gi|328956045|ref|YP_004373378.1| amino acid ABC transporter membrane protein, PAAT family
           [Coriobacterium glomerans PW2]
 gi|328456369|gb|AEB07563.1| amino acid ABC transporter membrane protein, PAAT family
           [Coriobacterium glomerans PW2]
          Length = 421

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 107/252 (42%), Gaps = 20/252 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN-----AKIFVFSFVLGIVLSLFATR 206
            LS  P         F     N  +   +  +          I   SF L I   L    
Sbjct: 167 FLSAQPWVRSWNSNKFLRLFANPMILVTSFPVVLQGFLMSLAIAAISFPLAIPCGLLL-A 225

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R       + +   Y++  ++ G P  + I + +   F  P+               F
Sbjct: 226 IMRRARSAVLRGIATTYVN--IVRGTPMFLQIYIAF---FGLPL--------AGVQVAPF 272

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I +   + A++ EI R+G+ ++  GQ EAA +LG+T  +    V++PQ  R++IP 
Sbjct: 273 ALGIIVMFMNSGAYLCEIFRAGIASIDIGQGEAARSLGMTRSQTMVDVIVPQMFRAVIPN 332

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LT++++ L K++SL  AVG  +LV    TI+  TG +I   ++    YL +++ ++    
Sbjct: 333 LTNEFILLYKDTSLLAAVGTMELVMYAKTIVANTG-SITPYIVAAAFYLVITLPLSKITR 391

Query: 387 RLNAKIALKEKK 398
            L  +++    +
Sbjct: 392 HLERRVSSGRTR 403



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L GF+ +  +A      A   G L+   R + + ++  I   YV + R  P  + I+ 
Sbjct: 198 VVLQGFLMSLAIAAISFPLAIPCGLLLAIMRRARSAVLRGIATTYVNIVRGTPMFLQIYI 257

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
            +  +           +    MF+N
Sbjct: 258 AFFGLPLAGVQVAPFALGIIVMFMN 282


>gi|296156610|ref|ZP_06839448.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893209|gb|EFG72989.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 331

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 18/268 (6%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
                +  L++ +F +    +    P +   + +        L+    T+   A      
Sbjct: 40  WALAVVSVLILAWFGHSVATN----PGYGWPVVWKYLTFQTILTGFLWTLGLTAASMAIG 95

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------F 246
            +LG++ +L      R        A   LYI  F   G P LV +   Y L         
Sbjct: 96  MILGVIAALM-----RQSSNPIVSAFAALYIWIF--RGTPLLVQLIFWYNLAALYPQIDL 148

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P       +  +++    ++  + L     A++AEIVRSGL++V  GQ EAA +LGL+
Sbjct: 149 GLPFFAPIASLQTNSIVTPIVAALLGLGLNEGAYMAEIVRSGLLSVDPGQREAAYSLGLS 208

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++LPQA+R I+PP  ++ + +LK +SL   +   DL+     I ++T + I +
Sbjct: 209 PARTIRRIILPQALRVIVPPTGNEIVGMLKATSLVSTLAIGDLLYSAQGIYSRTFETIPL 268

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +++    YL  S ++      L  K+  
Sbjct: 269 LIVASLWYLLASTLLTALQMTLERKLRR 296



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 5/116 (4%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL GF+ T  L  + M    I+G +    R S+N +V+    +Y+ +FR  P LV +
Sbjct: 74  FQTILTGFLWTLGLTAASMAIGMILGVIAALMRQSSNPIVSAFAALYIWIFRGTPLLVQL 133

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            F Y             I L    F     L   ++     A +       G  ++
Sbjct: 134 IFWYNLAALYP-----QIDLGLPFFAPIASLQTNSIVTPIVAALLGLGLNEGAYMA 184


>gi|225350854|ref|ZP_03741877.1| hypothetical protein BIFPSEUDO_02428 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158310|gb|EEG71552.1| hypothetical protein BIFPSEUDO_02428 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 327

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 12/243 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     + +    N   L     T+         + +L ++L++      R       +
Sbjct: 48  NPRFEWNVVWKYLFNENVLEGIKYTLLLTVISMGIAIILAVILAVM-----RKSINPVLR 102

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-GQFNFIGGSTVSPEFMSLYI 271
            +   YI  F    + T ++    +      +    P    +F  I   +V   F + ++
Sbjct: 103 GVSWFYIWFFRGTPVYTQLVFWGLFAVLVPRIGVGIPFTSIEFWSIDSQSVITAFNAAWL 162

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   AA++AEIVR+GL AV  GQ EAA ALG+      R V+LPQAMR IIPP  +++
Sbjct: 163 GLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSMIMRRVVLPQAMRIIIPPTGNEF 222

Query: 332 LNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +LK +SL  AV F  +L      I  +  + I ++++    YL ++ ++ +  +RL  
Sbjct: 223 IGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVACIWYLVITSILMVLQSRLEK 282

Query: 391 KIA 393
              
Sbjct: 283 HFG 285



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M  A I+  ++   R S N ++  +   Y+  FR  P    + F  
Sbjct: 66  LEGIKYTLLLTVISMGIAIILAVILAVMRKSINPVLRGVSWFYIWFFRGTPVYTQLVFWG 125

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
              + V  I           F +    S  + ++ T          L
Sbjct: 126 LFAVLVPRIGVGIP------FTSIEFWSIDSQSVITAFNAAWLGLAL 166


>gi|167759818|ref|ZP_02431945.1| hypothetical protein CLOSCI_02181 [Clostridium scindens ATCC 35704]
 gi|167662437|gb|EDS06567.1| hypothetical protein CLOSCI_02181 [Clostridium scindens ATCC 35704]
          Length = 230

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 115/234 (49%), Gaps = 16/234 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F+ +    +    +    ++  F+ ++GIVL  F   + R  ++KTGK   L  I 
Sbjct: 9   FYNNFIADERWKYIAEGLGVTLRVTFFAVIIGIVLG-FLVAIVRSTYDKTGKLRILNAIC 67

Query: 226 ---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I G P +V + + Y + F            GS+   + +   +A    + A++A
Sbjct: 68  KLYLTVIRGTPVVVQLLIIYFVIF------------GSSDVSKVLVAVMAFGLNSGAYVA 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG+++V  GQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S++ 
Sbjct: 116 EIFRSGIMSVDNGQFEAGRSLGFNYVQTMIYIIMPQAFKNVLPALGNEFIVLLKETSVSG 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   DL   G  I ++T  A   ++    IYL++ ++    +N L  ++   +
Sbjct: 176 YIALQDLTKGGDIIRSRTYDAFMPLIAVALIYLAMVLIFTKLVNMLERRLRSSD 229



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVF 136
                  I  G   T  + F  +I   ++G LV   R         +++  IC++Y+ V 
Sbjct: 15  ADERWKYIAEGLGVTLRVTFFAVIIGIVLGFLVAIVRSTYDKTGKLRILNAICKLYLTVI 74

Query: 137 RNIPPLVVIFFLYKSVL 153
           R  P +V +  +Y  + 
Sbjct: 75  RGTPVVVQLLIIYFVIF 91


>gi|330952972|gb|EGH53232.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae Cit 7]
          Length = 215

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 14/204 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           ++ + + V+G+V+ L    L+R       +    +YI  F   G P LV + + Y     
Sbjct: 23  QMAIGALVIGLVVGLVL-ALARRSSSAPLRRAASIYIEVF--RGTPALVQLFIIY----- 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 F+          F++  I L    AA++AEI R+GL AVP+GQ+EAA A+G+  
Sbjct: 75  ------FSLTAVGIEFSSFIAAIIGLGLNAAAYLAEIYRAGLEAVPKGQVEAAKAIGMPR 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+LPQA+R ++ P+ +  ++LLK++S+A  +   DL+     +       +E  
Sbjct: 129 GQVMRWVVLPQAIRIVLAPIGNVAISLLKDTSVASLIAAPDLMLRAQDLSAVYFMPLETY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           +    +Y +L   ++L +  L  K
Sbjct: 189 IRVGAMYFALCFPLSLGVRFLERK 212



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%)

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            +A   ++   ++G ++   R S++  +     +Y+EVFR  P LV +F +Y S+ +V  
Sbjct: 23  QMAIGALVIGLVVGLVLALARRSSSAPLRRAASIYIEVFRGTPALVQLFIIYFSLTAVGI 82

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                I    G+ LN              A
Sbjct: 83  EFSSFIAAIIGLGLNAAAYLAEIYRAGLEA 112


>gi|91788588|ref|YP_549540.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91697813|gb|ABE44642.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 255

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 112/257 (43%), Gaps = 10/257 (3%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLS 208
              +         I+  + +          T+T+    +       +G+  L+      +
Sbjct: 1   MEQVLWFGWFRADIISEYAVLFWRGLQMTITVTLICIVQGTALGLAIGMARLAQARHAPA 60

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-------YQLHFDKPVLGQFNFIGGST 261
           R   +   +    +Y+S F   G P  V I L        +    D  ++          
Sbjct: 61  RQLCQYALRWPSTVYVSFF--RGTPLFVQILLIHFAVLPLFINPADGLLISGETARNIKQ 118

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F+S  +AL+    A+I+EI R+G+ ++ +GQ+EA+ +LG++  +    V+LPQA R
Sbjct: 119 NYGAFLSGIVALTLNAGAYISEIFRAGIQSIDKGQVEASRSLGMSFPRTMYHVVLPQAFR 178

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++PPL +  ++LLK+SSL  A+G A+L     T+     +  E  L    +Y  L++ +
Sbjct: 179 RMLPPLGNNAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGL 238

Query: 382 ALFMNRLNAKIALKEKK 398
           A  + +L A+    + +
Sbjct: 239 AYVVKKLEARYGRGDSR 255



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 10/123 (8%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVY 132
           S YA     G   T  +    ++  T +G  +G  RL+  +           + W   VY
Sbjct: 16  SEYAVLFWRGLQMTITVTLICIVQGTALGLAIGMARLAQARHAPARQLCQYALRWPSTVY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V  FR  P  V I  ++ +VL +   P   +++      N +      L+      +   
Sbjct: 76  VSFFRGTPLFVQILLIHFAVLPLFINPADGLLISGETARNIKQNYGAFLSGIVALTLNAG 135

Query: 193 SFV 195
           +++
Sbjct: 136 AYI 138


>gi|295702707|ref|YP_003595782.1| L-cystine import ABC transporter permease TcyB [Bacillus megaterium
           DSM 319]
 gi|294800366|gb|ADF37432.1| L-cystine import ABC transporter, permease protein TcyB [Bacillus
           megaterium DSM 319]
          Length = 237

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 116/248 (46%), Gaps = 14/248 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + K  L     PD   +        +  L      +  +  + + +FVLGI+L++  T L
Sbjct: 1   MAKMFLLNNIFPDGERLNQLISIAQSSLLPMLKGAIQYSIPLTLITFVLGIILAVL-TAL 59

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R    K    +  +Y+S  +I G P LV + + +                       F+
Sbjct: 60  ARLSSIKVLNIIARIYVS--IIRGTPLLVQLFIIFY-----------GLPNLDITIDPFI 106

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  I  S    A+ +EI+R+ + ++P+GQ EA  +LG+T+ +A R ++LPQA R  IPPL
Sbjct: 107 SAVIGFSLSVGAYASEIIRAAIQSIPKGQWEAGYSLGMTYSQALRRIILPQAARVSIPPL 166

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA  +  +++      I +   + + +      +Y  +  ++++   R
Sbjct: 167 SNSFISLIKDTSLASLILVSEMFRKAQEIASTNYEFLLLYSEAALLYWIMCTILSIIQGR 226

Query: 388 LNAKIALK 395
           +  ++   
Sbjct: 227 IEIRLDRY 234



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  L     +   I+  L    RLS+ K++  I R+YV + R  P LV +F ++  + ++
Sbjct: 39  SIPLTLITFVLGIILAVLTALARLSSIKVLNIIARIYVSIIRGTPLLVQLFIIFYGLPNL 98

Query: 156 LPIPDHSIVLPFGMFLN 172
               D  I    G  L+
Sbjct: 99  DITIDPFISAVIGFSLS 115


>gi|326693349|ref|ZP_08230354.1| amino acid ABC transporter periplasmic protein [Leuconostoc
           argentinum KCTC 3773]
          Length = 481

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 17/220 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+    T+       VF+ + GI+L +              + +    I  F       L
Sbjct: 279 LNGLWQTIVLTVIAIVFALIWGILLGIMG-----VSQFGWVRGIATTIIYIFR-----GL 328

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ L + ++   P L            P F +  I L     A+    V  G  AV RG
Sbjct: 329 PLMVLAFFIYIGLPGLTG-------VKIPAFTAGIITLILNEGAYTGAFVCGGFEAVNRG 381

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL++ +A R V++PQ +R ++P   +Q++  LK++S+  A+G  +L   G  
Sbjct: 382 QMEAARSLGLSYSQAMRRVVMPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGSL 441

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I+ +  Q   +  I   +YL L  ++  F   +  ++  K
Sbjct: 442 IVARNSQGFRVWAIIGVMYLILITLLTWFSRWVEKRMTAK 481



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +  TA+L G   T  L    ++ A I G L+G   +S    V  I    + +FR +P +V
Sbjct: 273 TNKTALLNGLWQTIVLTVIAIVFALIWGILLGIMGVSQFGWVRGIATTIIYIFRGLPLMV 332

Query: 144 VIFFLYKSVL 153
           + FF+Y  + 
Sbjct: 333 LAFFIYIGLP 342


>gi|300697046|ref|YP_003747707.1| amino acid transmembrane ABC transporter protein [Ralstonia
           solanacearum CFBP2957]
 gi|299073770|emb|CBJ53291.1| putative amino acid transmembrane ABC transporter protein
           [Ralstonia solanacearum CFBP2957]
          Length = 262

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-Q 243
           T  K+ + S + G++L + A  L +       +     YI  ++I G P LV I   +  
Sbjct: 60  TTVKLTLASALAGVLLGVMA-ALGKLSPVWLLRQAASFYI--WVIRGTPLLVQILFVFLA 116

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P L             +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +L
Sbjct: 117 LPVWLPWLQ----------MDDFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSL 166

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+       V+ PQA +  +PPL + ++ LLK+SSLA A+G  +L +VG  +   T Q 
Sbjct: 167 GLSRWHTFADVIFPQAFKVALPPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQP 226

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ++    IYL+L+ ++  F N +  ++ ++ ++
Sbjct: 227 LPALVTTAVIYLALTTVLTQFSNAVEQRMDVEGRR 261



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A     G   T  L  +  +   ++G +   G+LS   L+      Y+ V R  P LV I
Sbjct: 51  AQIFADGTRTTVKLTLASALAGVLLGVMAALGKLSPVWLLRQAASFYIWVIRGTPLLVQI 110

Query: 146 FFLYKSVLSVLPI 158
            F++ ++   LP 
Sbjct: 111 LFVFLALPVWLPW 123


>gi|296111216|ref|YP_003621598.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
 gi|295832748|gb|ADG40629.1| glutamine ABC transporter, substrate binding and permease protein
           [Leuconostoc kimchii IMSNU 11154]
          Length = 477

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 13/210 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ + + VL  V  +    L      K  + +    I  F       L L+ L + 
Sbjct: 281 WQTIKLTIIAIVLASVWGILLGVLG-ISEFKWVRGISTTVIYLFR-----GLPLMVLAFF 334

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++   P +            P F +  I L     A+    VR G  AV RGQMEAA +L
Sbjct: 335 IYIGLPGVTGIKI-------PAFTAGIITLILNEGAYTGAFVRGGFEAVDRGQMEAARSL 387

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL +  A R V++PQ +R ++P   +Q++  LK++S+  A+G  +L   G  I+ +  Q 
Sbjct: 388 GLPYGHAMRKVIMPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGTLIVARNSQG 447

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +  I   +YL +  ++    N +  KI 
Sbjct: 448 FRVWAIIAIMYLVVITLLTWLSNWVEKKIK 477



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L    ++ A++ G L+G   +S  K V  I    + +FR +P +V+ FF
Sbjct: 275 ALLKGLWQTIKLTIIAIVLASVWGILLGVLGISEFKWVRGISTTVIYLFRGLPLMVLAFF 334

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 335 IYIGLP 340


>gi|57650956|ref|YP_187214.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|161510604|ref|YP_001576263.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|258407433|ref|ZP_05680576.1| ABC amino acid transporter [Staphylococcus aureus A9763]
 gi|258422239|ref|ZP_05685151.1| amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|294848955|ref|ZP_06789700.1| polar amino acid transport system permease [Staphylococcus aureus
           A9754]
 gi|295405100|ref|ZP_06814913.1| polar amino acid transport system permease [Staphylococcus aureus
           A8819]
 gi|297244157|ref|ZP_06928047.1| polar amino acid transport system permease [Staphylococcus aureus
           A8796]
 gi|57285142|gb|AAW37236.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus COL]
 gi|160369413|gb|ABX30384.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|257840945|gb|EEV65396.1| ABC amino acid transporter [Staphylococcus aureus A9763]
 gi|257841670|gb|EEV66107.1| amino acid ABC transporter [Staphylococcus aureus A9719]
 gi|294824334|gb|EFG40758.1| polar amino acid transport system permease [Staphylococcus aureus
           A9754]
 gi|294970045|gb|EFG46063.1| polar amino acid transport system permease [Staphylococcus aureus
           A8819]
 gi|297178935|gb|EFH38180.1| polar amino acid transport system permease [Staphylococcus aureus
           A8796]
          Length = 242

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V + + +    + 
Sbjct: 37  ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQLFIIFYGIPEL 93

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+ 
Sbjct: 94  GRLLTNDADNQWTLAP-VVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYG 152

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I +
Sbjct: 153 QTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYV 212

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      + I    +
Sbjct: 213 LVALMYWVVCFIISIIQGIYESYIERGYR 241



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 34  SIPITLVTFVLGLIIALFTALMRISTSKILRSISRVYVSIIRGTPMIVQLFIIFYGIPEL 93

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 94  GRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISI 136


>gi|210618017|ref|ZP_03291852.1| hypothetical protein CLONEX_04085 [Clostridium nexile DSM 1787]
 gi|210149010|gb|EEA80019.1| hypothetical protein CLONEX_04085 [Clostridium nexile DSM 1787]
          Length = 233

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 106/227 (46%), Gaps = 14/227 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+  +    +    +G+ +++    +S++   +  K    +Y  T +I G
Sbjct: 21  YLVYLDGLKVTILISIFAILIGVAIGLFIAVVKVTVSKNIFVRILKWFCNVY--TTVIRG 78

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V + + Y + F             +  + E     I     + A++AEI+R+G+ +
Sbjct: 79  TPVMVQLLIMYNMVF------------TARDTNEIFVGAICFGINSGAYVAEIIRAGIES 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQMEA  +LG  + +  R +++PQA+++I+P L ++++ L+K +S+A  +   DL  
Sbjct: 127 IDRGQMEAGRSLGFNYIQTMRYIIVPQAVKNILPALGNEFIVLIKETSVAGVIAVTDLTK 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I +     +  + +    YL + + +    + L  +++  ++ 
Sbjct: 187 AAQYIGSTDFIVLPPLFVAAGCYLVIVLGLTKLQSLLERRLSQGDRH 233



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFR 137
                  L G   T  ++   ++    IG  +   +++ +K     ++ W C VY  V R
Sbjct: 18  DQRYLVYLDGLKVTILISIFAILIGVAIGLFIAVVKVTVSKNIFVRILKWFCNVYTTVIR 77

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V +  +Y  V +  
Sbjct: 78  GTPVMVQLLIMYNMVFTAR 96


>gi|313123036|ref|YP_004033295.1| ABC amino acid transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312279599|gb|ADQ60318.1| ABC-type amino acid transport system, permease component
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|325684798|gb|EGD26950.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 247

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 102/214 (47%), Gaps = 6/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKYQL 244
             + + SF+LG++++L  T L R   +  G  +   +     +L    P LV + + Y  
Sbjct: 33  ITLALISFILGLIIALV-TALVRISDKGGGFLIIKAIFRFYVWLFRSTPLLVQLFIVY-- 89

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L     +        F +  I  S  T A+ +E +R+ + +VPR Q EAA ++G
Sbjct: 90  -FGLPYLKIPGLLPNGIKLAPFTAGIITFSLNTGAYASETIRAAIQSVPREQWEAAASIG 148

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   K  R ++LPQA++  IPPL++ ++ L+K++SLA ++   ++  V   I  +  Q +
Sbjct: 149 MNRGKTLRRIILPQALKVSIPPLSNSFIGLVKDTSLAASITIVEMFEVSQQIAAENYQPL 208

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +   +Y     +++     L    +   K+
Sbjct: 209 IMYSLVALVYALFCSVLSWLQGWLEKASSRHSKE 242


>gi|322688640|ref|YP_004208374.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
           157F]
 gi|320459976|dbj|BAJ70596.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 331

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+      +  ++  P       +    N   L     T++      V + +L +
Sbjct: 29  VAAVIVVLLAAMLIQGLITNPRLDWPTVWKYLFNENVLEGIRYTLELTVISMVVAIILSV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 89  ILAIM-----RKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGLFAVLIPKISLGIPFTSV 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
           F YL ++ ++ +  +RL A   
Sbjct: 264 FWYLLITSILMVVQSRLEAHFG 285



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+ A+++ ++    +  +  N  + +      +L                        +L
Sbjct: 28  IVAAVIVVLLAAMLIQGLITN-PRLDWPTVWKYLFNEN--------------------VL 66

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F   
Sbjct: 67  EGIRYTLELTVISMVVAIILSVILAIMRKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGL 126

Query: 151 SVLSVLP 157
             + +  
Sbjct: 127 FAVLIPK 133


>gi|312973871|ref|ZP_07788043.1| L-cystine transport system permease protein tcyB [Escherichia coli
           1827-70]
 gi|310332466|gb|EFP99701.1| L-cystine transport system permease protein tcyB [Escherichia coli
           1827-70]
          Length = 222

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWLVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS   LV W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWLVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|226306802|ref|YP_002766762.1| amino acid ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|226185919|dbj|BAH34023.1| putative amino acid ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
          Length = 316

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 7/240 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             +G +         +    T  ++ V + V+ IVL +    + R       +A    Y+
Sbjct: 46  FAWGTYGQYLFDKRISAGAWTTIQLTVLAMVIAIVLGVIL-AVMRLSPNPVLRAAAWGYL 104

Query: 225 STFLIFGLPT-LVLIALKYQLH----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             F    +   LV   L   ++       P + QF  I    +   F+   I L+   AA
Sbjct: 105 WIFRGTPVYVQLVFWGLFPSIYKSIDLGIPFVHQFAHINLQDLQAAFLFAVIGLALNEAA 164

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AEIVR+G+ +V  GQ EA++ALG+T  +  R  +LPQAMR IIPP  ++ +++LK +S
Sbjct: 165 YMAEIVRAGVSSVNEGQTEASVALGMTWSQTMRRTVLPQAMRVIIPPTGNEVISMLKTTS 224

Query: 340 LAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L  AV ++ +L      I     + I ++++    YL+++ ++ +    +    +    +
Sbjct: 225 LVTAVPYSFELYGRARDISGANFEPIPLLMVAATWYLAITSLLMIGQYYVERHYSKGATR 284



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 12/118 (10%)

Query: 84  SYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +Y   +       G   T  L    M+ A ++G ++   RLS N ++      Y+ +FR 
Sbjct: 50  TYGQYLFDKRISAGAWTTIQLTVLAMVIAIVLGVILAVMRLSPNPVLRAAAWGYLWIFRG 109

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
            P  V + F           P     +  G+   ++        +       V    L
Sbjct: 110 TPVYVQLVFWGL-------FPSIYKSIDLGIPFVHQFAHINLQDLQAAFLFAVIGLAL 160


>gi|29829525|ref|NP_824159.1| arginine/ornithine transport permease [Streptomyces avermitilis
           MA-4680]
 gi|29606633|dbj|BAC70694.1| putative arginine/ornithine ABC transport permease [Streptomyces
           avermitilis MA-4680]
          Length = 312

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 5/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH- 245
             + V S ++GIV  +    + R        ++   YI  F   G P LV + + + L  
Sbjct: 77  LLLTVLSMLIGIVGGILL-AVMRLSKNPVTSSIAWFYIWFF--RGTPVLVQLIIWFNLGL 133

Query: 246 -FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F+   LG       S+     ++  + L    AA++AEI R+GL++V  GQ EA+ ALG
Sbjct: 134 VFEYINLGPIYKDYWSSFMTPLLTALLGLGLNEAAYMAEICRAGLLSVDEGQTEASHALG 193

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++H K  R +++PQAMR I+PP  ++ +N+LK +SL   V + +L      I   +G  +
Sbjct: 194 MSHNKTLRRIVIPQAMRVIVPPTGNEVINMLKTTSLVSVVQYPELFRYAQDIGQTSGAPV 253

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E++ +    YL ++ ++++    +    A    +
Sbjct: 254 EMLFLAAAWYLIMTSVLSIGQYYVERYYARGSSR 287



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 34/103 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L    M+   + G L+   RLS N + + I   Y+  FR  P LV +   
Sbjct: 69  ILTGVGKTLLLTVLSMLIGIVGGILLAVMRLSKNPVTSSIAWFYIWFFRGTPVLVQLIIW 128

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +   L    I    I   +        L+         A    
Sbjct: 129 FNLGLVFEYINLGPIYKDYWSSFMTPLLTALLGLGLNEAAYMA 171


>gi|160938084|ref|ZP_02085441.1| hypothetical protein CLOBOL_02979 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439078|gb|EDP16833.1| hypothetical protein CLOBOL_02979 [Clostridium bolteae ATCC
           BAA-613]
          Length = 226

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 15/226 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                     +T+       + + VLG++  LF     +    K  K +  +YI   +I 
Sbjct: 10  YYPSFFKALGITLQMTVISLLCATVLGVIFGLF-----KVSDFKVLKLVADVYID--IIR 62

Query: 231 GLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV + +         KP   Q++ IGG      F +  +ALS    A++AEI+R G
Sbjct: 63  GTPLLVQVMIMMYGVGSVLKPYGFQWSNIGG-----AFTAGCVALSLNAGAYMAEIIRGG 117

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQMEAA +LGL++ KA R V+LPQA R+++P + +Q++  LK++SL   +G  +
Sbjct: 118 IEAVDKGQMEAARSLGLSYGKAMRKVILPQAFRTMLPSIINQFIISLKDTSLVSVIGPRE 177

Query: 349 LVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   G  I   +    + I +     YL +  +++     +  +++
Sbjct: 178 LTQNGKIIAANSASMVMPIWICVALFYLVVCTILSRIAKYVERRVS 223



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 37/88 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y  +       T  +    ++ AT++G + G  ++S  K++  +  VY+++ R  P LV
Sbjct: 9   QYYPSFFKALGITLQMTVISLLCATVLGVIFGLFKVSDFKVLKLVADVYIDIIRGTPLLV 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            +  +   V SVL           G F 
Sbjct: 69  QVMIMMYGVGSVLKPYGFQWSNIGGAFT 96


>gi|222152518|ref|YP_002561693.1| glutamine ABC transporter glutamine-binding protein/permease
           [Streptococcus uberis 0140J]
 gi|222113329|emb|CAR40917.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Streptococcus uberis 0140J]
          Length = 516

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 12/182 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F +K       +YI  F   G P +V   + Y                        ++  
Sbjct: 334 FFQKLFGWFLNVYIEVF--RGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAI 381

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             +S  T A++ EIVR G+ AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++
Sbjct: 382 FIVSINTGAYMTEIVRGGIFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNE 441

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  +K++S+   +   +L   G T+  Q  Q  +   +   IY  L+  +   +  +  
Sbjct: 442 FVINIKDTSVLNVISVVELYFSGNTVATQNYQYFQTFSVIAVIYFILTFTVTRILRYVER 501

Query: 391 KI 392
           +I
Sbjct: 502 RI 503


>gi|258541041|ref|YP_003175540.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152717|emb|CAR91689.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 486

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 17/223 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               ++    TM        F+  +GI++ L           +  + +   +I  F   G
Sbjct: 281 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLG-----VLPNRFARGVATTFIYIF--RG 333

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         +  P F++  I L+    A+ A  V+ G+ A
Sbjct: 334 LPLLVLALFIYT---GVPSLIG-------SKIPAFVAGIITLTLNEGAYTAAFVKGGIQA 383

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 384 VDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQ 443

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            G  II +  +  +I  +   IYL +  ++    N +  ++ +
Sbjct: 444 TGKIIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQRRMEV 486



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +    +  AT +G LVG   +  N+    +   ++ +FR +P LV+ 
Sbjct: 281 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLGVLPNRFARGVATTFIYIFRGLPLLVLA 340

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 341 LFIYTGVPSL 350


>gi|302549232|ref|ZP_07301574.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
 gi|302466850|gb|EFL29943.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
          Length = 310

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 14/248 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +      +   +    +T+   A   V  F+LG V++       R        
Sbjct: 51  NPVWEWNVFRDYVFSETIVQAVWVTLQLTAYATVLGFLLGTVIAFM-----RLSRSPVLS 105

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKPVLGQFNFIGGSTVSPEFMSLY 270
            +   YI  F    +P +V +   + L           P    F  +  +T+     +  
Sbjct: 106 TVAWTYIWIF--RSIPMIVQLVFWFNLSALYEELGLGIPFGPVFVSVDSNTLIGTIGAAV 163

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   +  R ++LPQAMR+I+P   ++
Sbjct: 164 IGLTLHQAAYAAEIVRGGVLAVDHGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGNE 223

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +S+   +   +L      I  + G+ + ++L+    Y+ L+ ++++    +  
Sbjct: 224 IIGLLKGTSVVYVMSIGELFYQVQVIYGRNGRVVPLLLVATAWYVVLTSLLSVAQYYVER 283

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 284 RYARGADR 291



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 4/73 (5%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    +   A+ V    T  L     +   ++GT++   RLS + +++ +   Y+ +FR
Sbjct: 61  DYVFSETIVQAVWV----TLQLTAYATVLGFLLGTVIAFMRLSRSPVLSTVAWTYIWIFR 116

Query: 138 NIPPLVVIFFLYK 150
           +IP +V + F + 
Sbjct: 117 SIPMIVQLVFWFN 129


>gi|167031268|ref|YP_001666499.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166857756|gb|ABY96163.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 222

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R         L  +Y+S F   G P LV + + Y   F  P +                +
Sbjct: 45  RLSKILPLNWLARVYVSFF--RGTPLLVQLFVIY---FGMPQI--------GIELDPIPA 91

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I LS   AA+I EI+R+ + ++ RGQ EAA ++G+T  +A R  +LPQA+R+ +PPL 
Sbjct: 92  SLIGLSLNMAAYICEILRAAISSIDRGQWEAAASIGMTRVQAMRRAILPQALRTALPPLG 151

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++L+K+++LA  +   +L      I  +T +   + +    IY  L  ++A F NR+
Sbjct: 152 NSFISLVKDTALAATIQVPELFRQAQLITARTFEVFTMYVAVAVIYWVLCSILAHFQNRM 211

Query: 389 NAKIALKEKK 398
            A++   +++
Sbjct: 212 EARVNQHDQE 221



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RLS    + W+ RVYV  FR  P LV +F +
Sbjct: 16  LLKGAGYTVLLSVGGMFFGLLLGFALALMRLSKILPLNWLARVYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G+ LN 
Sbjct: 76  YFGMPQIGIELDPIPASLIGLSLNM 100


>gi|291003747|ref|ZP_06561720.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 791

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 14/221 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 FG+F N    +   +        +  + VLG+ L+L      +    +      
Sbjct: 288 FDWAYTFGLFGNAELWNAALMVAVLAVLAWSIATVLGMGLALL-----KRSELRVLSVPA 342

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             Y+  F    LP LVL+   Y L    P L          +   F+   +AL     A+
Sbjct: 343 SGYVWFF--RSLPLLVLLIFIYNLPQVIPELR-------PVLGSPFVVGLVALVLSETAY 393

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEI R GL +V  GQ EAA ALG+ +    RLV++PQA R  +P L +Q++ +LK +SL
Sbjct: 394 IAEIHRGGLKSVSVGQGEAARALGIPYGGVQRLVVIPQAFRVALPALGNQFITILKLTSL 453

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  A+++ VG  +  Q  + +E +L     Y+ L  + 
Sbjct: 454 VSSISLAEILLVGQRLYTQNFKVLETLLAVSIFYVVLVTLF 494



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            +  GF+       + +   +  A++V  +     A      AT++G  +   + S  ++
Sbjct: 283 DDDFGFDWAYTFGLFGNAELWNAALMVAVL-----AVLAWSIATVLGMGLALLKRSELRV 337

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYK 150
           ++     YV  FR++P LV++ F+Y 
Sbjct: 338 LSVPASGYVWFFRSLPLLVLLIFIYN 363


>gi|323174568|gb|EFZ60189.1| L-cystine transport system permease protein tcyB [Escherichia coli
           LT-68]
          Length = 222

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQIMRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|260777100|ref|ZP_05885994.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260606766|gb|EEX33040.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 265

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 19/246 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
                 +PD+      G +     L    +T+  +A   +F+ ++G++ +L      +  
Sbjct: 37  QWQWHRVPDYIAFYEDGEWWPAELLEGLWVTIKISAWSLLFTLLIGMLTALL-----KLS 91

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
               G+ +   YI   LI   P LV I L Y +             G       F +  +
Sbjct: 92  QSVVGRTIANTYIE--LIRNTPLLVQIYLLYFVF------------GPVIGLDRFATAIL 137

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS +  A+ AEI R GL ++P+GQ EAA +LGL+       V+ PQ ++  +PPLT++ 
Sbjct: 138 ALSLFQGAYTAEIFRGGLNSIPKGQFEAARSLGLSPFSTYYDVIFPQLLQRTLPPLTNEV 197

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L  K
Sbjct: 198 VSLVKNSSIVSVMAIFDLTTEGRNIVSETAMPFEIWFSVAAIYLLLTLSLSGISAWLEHK 257

Query: 392 IALKEK 397
           +  + +
Sbjct: 258 LGAQWR 263



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 77  VPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           + +  D  +  A +L G   T  ++   ++   +IG L    +LS + +   I   Y+E+
Sbjct: 47  IAFYEDGEWWPAELLEGLWVTIKISAWSLLFTLLIGMLTALLKLSQSVVGRTIANTYIEL 106

Query: 136 FRNIPPLVVIFFLYKSV 152
            RN P LV I+ LY   
Sbjct: 107 IRNTPLLVQIYLLYFVF 123


>gi|258425045|ref|ZP_05687916.1| transport system membrane protein [Staphylococcus aureus A9635]
 gi|282909732|ref|ZP_06317541.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282911978|ref|ZP_06319774.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|257844879|gb|EEV68922.1| transport system membrane protein [Staphylococcus aureus A9635]
 gi|282323674|gb|EFB53990.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282326306|gb|EFB56610.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Staphylococcus aureus subsp. aureus WW2703/97]
          Length = 242

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V + + +    + 
Sbjct: 37  ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQLFIIFYGIPEL 93

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+R
Sbjct: 94  GRLLTNDADNQWTLAP-VVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYR 152

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I +
Sbjct: 153 QTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYV 212

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      + I    +
Sbjct: 213 LVALMYWVVCFIISIIQGIYESYIERGYR 241



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 34  SIPITLVTFVLGLIIALFTALMRISTSKVLRSIARVYVSIIRGTPMIVQLFIIFYGIPEL 93

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 94  GRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISI 136


>gi|237785943|ref|YP_002906648.1| ABC transporter permease [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758855|gb|ACR18105.1| ABC-type transport system, permease protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 310

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 7/217 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL-IFGLPTLVLIALKYQ 243
               + V +  +GIVL++ A  + R       +++   YI  F  I     LV   L   
Sbjct: 67  WTLLLTVLAMAIGIVLAVTA-AIMRQSENPVLRSVAWAYIFVFRGIPVYTQLVFWGLLAV 125

Query: 244 LH----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L+       P   +F     S +   F +  + L     A++AEIVRSGL +V  GQ EA
Sbjct: 126 LYPKLSMGVPFGPEFFKFDTSDIITAFWAATLGLGFNEGAYLAEIVRSGLESVDEGQHEA 185

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIIN 358
           A ALG+ H    R +++PQAMR IIPPL ++ + +LK +SL +AV F  DL      I N
Sbjct: 186 ARALGMKHSTVLRRIIIPQAMRVIIPPLGNETIGMLKTTSLVLAVPFTLDLQYATNAIAN 245

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +    I ++++    YL ++ ++ +    L       
Sbjct: 246 RLYAPIPLLIVAALWYLVVTSVLMVGQYFLERYFGRG 282



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 31/112 (27%), Gaps = 5/112 (4%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    M    ++       R S N ++  +   Y+ VFR IP    + F  
Sbjct: 62  VKGVGWTLLLTVLAMAIGIVLAVTAAIMRQSENPVLRSVAWAYIFVFRGIPVYTQLVFWG 121

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
              +    +      +               +     A      F  G  L+
Sbjct: 122 LLAVLYPKL-----SMGVPFGPEFFKFDTSDIITAFWAATLGLGFNEGAYLA 168


>gi|49487195|ref|YP_044416.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|87160289|ref|YP_494993.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196338|ref|YP_501160.1| amino acid ABC transporter permease [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268848|ref|YP_001247791.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150394922|ref|YP_001317597.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|151222524|ref|YP_001333346.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|221141309|ref|ZP_03565802.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253314750|ref|ZP_04837963.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253730086|ref|ZP_04864251.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253734171|ref|ZP_04868336.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|255007187|ref|ZP_05145788.2| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794753|ref|ZP_05643732.1| amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|258439631|ref|ZP_05690377.1| transport system membrane protein [Staphylococcus aureus A9299]
 gi|258442812|ref|ZP_05691372.1| ABC transporter [Staphylococcus aureus A8115]
 gi|258446488|ref|ZP_05694643.1| ABC transporter [Staphylococcus aureus A6300]
 gi|258450395|ref|ZP_05698487.1| transport system membrane protein [Staphylococcus aureus A6224]
 gi|258451282|ref|ZP_05699315.1| transport system membrane protein [Staphylococcus aureus A5948]
 gi|258455229|ref|ZP_05703189.1| amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|269204045|ref|YP_003283314.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282893860|ref|ZP_06302092.1| polar amino acid transport system permease [Staphylococcus aureus
           A8117]
 gi|282920398|ref|ZP_06328121.1| polar amino acid transport system permease [Staphylococcus aureus
           A9765]
 gi|282928446|ref|ZP_06336047.1| ABC transporter ATP-binding protein [Staphylococcus aureus A10102]
 gi|284025433|ref|ZP_06379831.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus 132]
 gi|296276926|ref|ZP_06859433.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297209767|ref|ZP_06926163.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300910779|ref|ZP_07128229.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|304379611|ref|ZP_07362344.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|49245638|emb|CAG44117.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|87126263|gb|ABD20777.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203896|gb|ABD31706.1| amino acid ABC transproter, permease protein, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147741917|gb|ABQ50215.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149947374|gb|ABR53310.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|150375324|dbj|BAF68584.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|253726173|gb|EES94902.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253727866|gb|EES96595.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH130]
 gi|257788725|gb|EEV27065.1| amino acid ABC transporter [Staphylococcus aureus A9781]
 gi|257847407|gb|EEV71409.1| transport system membrane protein [Staphylococcus aureus A9299]
 gi|257851933|gb|EEV75867.1| ABC transporter [Staphylococcus aureus A8115]
 gi|257854556|gb|EEV77504.1| ABC transporter [Staphylococcus aureus A6300]
 gi|257856487|gb|EEV79396.1| transport system membrane protein [Staphylococcus aureus A6224]
 gi|257861074|gb|EEV83889.1| transport system membrane protein [Staphylococcus aureus A5948]
 gi|257862440|gb|EEV85208.1| amino acid ABC transporter [Staphylococcus aureus A5937]
 gi|262076335|gb|ACY12308.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269941996|emb|CBI50408.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282589841|gb|EFB94925.1| ABC transporter ATP-binding protein [Staphylococcus aureus A10102]
 gi|282594344|gb|EFB99330.1| polar amino acid transport system permease [Staphylococcus aureus
           A9765]
 gi|282763918|gb|EFC04046.1| polar amino acid transport system permease [Staphylococcus aureus
           A8117]
 gi|296885440|gb|EFH24377.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|298695677|gb|ADI98899.1| ABC transporter permease [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887759|gb|EFK82954.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|302334042|gb|ADL24235.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus JKD6159]
 gi|302752284|gb|ADL66461.1| ABC transporter ATP-binding protein [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304341787|gb|EFM07693.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312830759|emb|CBX35601.1| L-cystine transport system permease protein tcyB [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315128573|gb|EFT84577.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus CGS03]
 gi|315197389|gb|EFU27726.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|320139119|gb|EFW31001.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320142504|gb|EFW34313.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323439639|gb|EGA97358.1| ABC transporter permease [Staphylococcus aureus O11]
 gi|323442696|gb|EGB00323.1| ABC transporter permease [Staphylococcus aureus O46]
 gi|329315099|gb|AEB89512.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329723591|gb|EGG60120.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329726684|gb|EGG63145.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329730323|gb|EGG66713.1| ABC transporter, permease protein [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 239

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+ 
Sbjct: 91  GRLLTNDADNQWTLAP-VVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYG 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I +
Sbjct: 150 QTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYV 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      + I    +
Sbjct: 210 LVALMYWVVCFIISIIQGIYESYIERGYR 238



 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFVLGLIIALFTALMRISTSKILRSISRVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|157145290|ref|YP_001452609.1| hypothetical protein CKO_01027 [Citrobacter koseri ATCC BAA-895]
 gi|157082495|gb|ABV12173.1| hypothetical protein CKO_01027 [Citrobacter koseri ATCC BAA-895]
          Length = 222

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPYLLKGAVFTLQLSIGGMFFGLLLGFILALM-----RMSPLLPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA
Sbjct: 104 SETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFEEQLNRQER 219



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFILALMRMSPLLPVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +       D       G+ LN
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLN 98


>gi|239813181|ref|YP_002942091.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239799758|gb|ACS16825.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 222

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      +G            +I   +  LG VL L       +   +        Y+
Sbjct: 1   MDFDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWLYGACTAYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +   I G P LV + + +           F       + P F+   + L  Y+ A+++EI
Sbjct: 61  AA--IRGTPLLVQLFILF-----------FGLPHFGILLPAFLCGVLGLGVYSGAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  + ++ +GQ  AA +LG+T   A R ++LPQA+  +IPPL ++++ L+KNS+L   +
Sbjct: 108 VRGAIQSIDKGQTMAAQSLGMTPGTAMREIVLPQAVVRMIPPLGNEFIALIKNSALVSLL 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              D++  G  II+ + +++E+ L    +Y  L+  + L +     K+ 
Sbjct: 168 TIHDVMHEGQKIISVSYRSLEVYLAIALVYFVLTGTMTLVLRHFEQKLR 216



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEVF 136
            ++        +L G + T  +    +    ++G LVG GRL+   + +   C  YV   
Sbjct: 4   DFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWLYGACTAYVAAI 63

Query: 137 RNIPPLVVIFFLYKSVLSVLP 157
           R  P LV +F L+  +     
Sbjct: 64  RGTPLLVQLFILFFGLPHFGI 84


>gi|289422748|ref|ZP_06424588.1| amino acid ABC transporter, permease protein [Peptostreptococcus
           anaerobius 653-L]
 gi|289156927|gb|EFD05552.1| amino acid ABC transporter, permease protein [Peptostreptococcus
           anaerobius 653-L]
          Length = 221

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 111/210 (52%), Gaps = 7/210 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   +  LG  + L A  + +  + K    +  +YI   +I   P ++ +A+ Y   F
Sbjct: 19  IGLSFLALFLGFFVGLIAC-IGKISNSKVASIIASIYIE--VIRDTPLMIQLAIIY---F 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L   NF     +  EF +   AL+  + A++AEI+RSG+ AV +GQMEA+ +LGL 
Sbjct: 73  GLPSL-GVNFPSLFGLPEEFTAGVFALTLNSGAYVAEIMRSGIQAVNKGQMEASRSLGLN 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A R V++PQA+++I+P L +++++L+K S++   VG  DL     ++ N TG     
Sbjct: 132 YWQAMRYVIVPQAVKNILPALANEFISLIKESAIVSVVGITDLTFFASSVKNSTGDFFGP 191

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +    +Y  ++  ++  +  L  K++ + 
Sbjct: 192 YIFAAVVYFVITFTLSKLVGLLEKKMSTER 221



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 41/83 (49%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y ++ L G   T  L+F  +     +G +   G++S +K+ + I  +Y+EV R+ P ++
Sbjct: 6   NYYSSFLSGTGITIGLSFLALFLGFFVGLIACIGKISNSKVASIIASIYIEVIRDTPLMI 65

Query: 144 VIFFLYKSVLSVLPIPDHSIVLP 166
            +  +Y  + S+         LP
Sbjct: 66  QLAIIYFGLPSLGVNFPSLFGLP 88


>gi|328470613|gb|EGF41524.1| amino acid ABC transporter permease protein [Vibrio
           parahaemolyticus 10329]
          Length = 265

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 19/250 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+      G +     +    +T++ +     F+ VLG+V +L      
Sbjct: 34  MGYQWQWERVPDYIAFYEDGEWWPAELIDGLLVTLNISVISLFFTLVLGLVTALL----- 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K G  +   Y+   +I   P LV I L Y +             G       F +
Sbjct: 89  RLSDSKVGNVIGTTYVE--VIRNTPLLVQIYLLYFVF------------GPVIGLDRFST 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AEI R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT
Sbjct: 135 AVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL +    I+++T    EI      IYL+L++ ++     L
Sbjct: 195 NEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWL 254

Query: 389 NAKIALKEKK 398
             K+    +K
Sbjct: 255 EHKLGASWRK 264



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 1/97 (1%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVG 115
           L  G   +  +  +E     + +  D  +  A ++ G + T  ++   +    ++G +  
Sbjct: 27  LDSGADAMGYQWQWERVPDYIAFYEDGEWWPAELIDGLLVTLNISVISLFFTLVLGLVTA 86

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             RLS +K+   I   YVEV RN P LV I+ LY   
Sbjct: 87  LLRLSDSKVGNVIGTTYVEVIRNTPLLVQIYLLYFVF 123


>gi|225405626|ref|ZP_03760815.1| hypothetical protein CLOSTASPAR_04847 [Clostridium asparagiforme
           DSM 15981]
 gi|225042846|gb|EEG53092.1| hypothetical protein CLOSTASPAR_04847 [Clostridium asparagiforme
           DSM 15981]
          Length = 233

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 16/241 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           ++     +  F+ + G  + T+ +     I  F+ ++GIVL      + R  +EKT K  
Sbjct: 6   EYFYSRFYLNFIEDDGWKYITVGLKNTLIITFFACLMGIVLGFLVG-MVRSTYEKTHKLK 64

Query: 220 PLLYIS---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            L  I      +I G P +V + + Y + F            GS    + +   +A    
Sbjct: 65  ILNAICKVYLTVIRGTPVVVQLMIIYFVVF------------GSVRISKVLVAVLAFGIN 112

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AEI RSG++++  GQ+EA  +LG ++ +    +++PQA ++++P L +++++LLK
Sbjct: 113 SGAYVAEIFRSGIMSIDSGQLEAGRSLGFSYWQTMWYIIMPQAFKNVLPALCNEFISLLK 172

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+A  +   DL   G  I ++T  A   +     IYL++ ++    +  L  ++   E
Sbjct: 173 ETSVAGYIALQDLTKGGDIIRSRTYSAFMPLFAVALIYLTIVMIFTKLIQILERRLRQSE 232

Query: 397 K 397
           +
Sbjct: 233 R 233



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVFRNIP 140
              I VG  NT  + F   +   ++G LVG  R         K++  IC+VY+ V R  P
Sbjct: 22  WKYITVGLKNTLIITFFACLMGIVLGFLVGMVRSTYEKTHKLKILNAICKVYLTVIRGTP 81

Query: 141 PLVVIFFLYKSVL 153
            +V +  +Y  V 
Sbjct: 82  VVVQLMIIYFVVF 94


>gi|320093690|ref|ZP_08025558.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319979350|gb|EFW10839.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 312

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 7/243 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    +               +     + V + ++G  L++    + R       K +  
Sbjct: 42  NPNYQWSTVWAWLFSQSIMSGVLFTIILTVLAMLIGTALAI-TMAIMRQSINPVLKWVAT 100

Query: 222 LYISTFLIFGLPTLVLIA-----LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            YI  F    + T ++       L  +L    P   +F     +     F   ++ L   
Sbjct: 101 AYIWFFRGTPIYTQLIFWSLLPTLYPKLSLGIPFGPEFVTFETAAYFTPFWMAFVGLGLN 160

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEI+R+GL++V +GQ EAA ALG+      R ++LPQAMR I+PP+ ++ +++LK
Sbjct: 161 EGAYLAEIMRAGLLSVDKGQWEAATALGMPRSLIFRRIVLPQAMRVIVPPIGNETISMLK 220

Query: 337 NSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +SL  A+ F  +L  V           + +++     YL ++ ++    + +    A  
Sbjct: 221 TTSLVSAIPFTLELTFVARQKGQAMFAPVPLLIAAAIWYLLITTLLMWIQSYIEKHFAKG 280

Query: 396 EKK 398
             +
Sbjct: 281 FDR 283



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 50/157 (31%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              ++ +I+ G + T  L    M+  T +   +   R S N ++ W+   Y+  FR  P 
Sbjct: 52  AWLFSQSIMSGVLFTIILTVLAMLIGTALAITMAIMRQSINPVLKWVATAYIWFFRGTPI 111

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
              + F          +       P  +         P         +   +++  I+ +
Sbjct: 112 YTQLIFWSLLPTLYPKLSLGIPFGPEFVTFETAAYFTPFWMAFVGLGLNEGAYLAEIMRA 171

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
              +     +   T   +P   I   ++      V++
Sbjct: 172 GLLSVDKGQWEAATALGMPRSLIFRRIVLPQAMRVIV 208


>gi|313902717|ref|ZP_07836115.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467014|gb|EFR62530.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermaerobacter subterraneus DSM 13965]
          Length = 225

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 14/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S VLG+ + L    L +       + +   Y  T++I G P LV I L Y 
Sbjct: 27  WLTLKLTVVSIVLGLAIGLLV-ALMKLSRFGVLRTIGSAY--TWIIRGTPLLVQIYLIY- 82

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V   F +   ALS  + A++AEI+R+G+ ++PRGQMEAA +L
Sbjct: 83  ----------FGLSDYGIVLEAFPAGVAALSINSGAYLAEIIRAGIESIPRGQMEAARSL 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ +A R V+LPQA R +IPP+ ++++ LLK+SSL   +G  +++       + T ++
Sbjct: 133 GMSYGQAMRRVILPQAYRRMIPPMVNEFVILLKDSSLVSVIGLQEIMLNSRQFASATLKS 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +       F YL ++ +     + L  K+   E
Sbjct: 193 VWFFGYAAFYYLVMTTLFTTLGSWLERKLKEYE 225



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  L    ++    IG LV   +LS   ++  I   Y  + R  P LV I+ +
Sbjct: 22  YLAGAWLTLKLTVVSIVLGLAIGLLVALMKLSRFGVLRTIGSAYTWIIRGTPLLVQIYLI 81

Query: 149 YKSV 152
           Y  +
Sbjct: 82  YFGL 85


>gi|325663781|ref|ZP_08152182.1| hypothetical protein HMPREF0490_02923 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331087298|ref|ZP_08336367.1| hypothetical protein HMPREF0987_02670 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325470114|gb|EGC73348.1| hypothetical protein HMPREF0490_02923 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330408389|gb|EGG87860.1| hypothetical protein HMPREF0987_02670 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 239

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 105/225 (46%), Gaps = 14/225 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+  +    +    +G+++++      +         +  +YI+  +I G
Sbjct: 27  YLAYLDGLKITILISIFAILIGIAIGLLVAVVKVSAVQRKELWIFNKICNIYIT--IIRG 84

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V + + Y L F             S  +   +   +     + A++AEI+R+G+ +
Sbjct: 85  TPVMVQLLIIYNLIF------------TSRDTNALLVGAVCFGINSGAYVAEIIRAGIES 132

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQMEA  +LGL + +  + +++PQA+++I+P L ++++ L+K +S+A  +   DL  
Sbjct: 133 IDKGQMEAGRSLGLNYLQTMKEIIIPQAIKNILPALGNEFIVLIKETSVAGVIAVTDLTK 192

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               I + T   +  + +    YL + + +   +N    ++A  +
Sbjct: 193 AAQYIGSATYDILPPLYVAAVCYLVIVLGLTKLLNLFERRMAQGD 237


>gi|300173758|ref|YP_003772924.1| glutamine-binding protein/glutamine transport system permease
           [Leuconostoc gasicomitatum LMG 18811]
 gi|299888137|emb|CBL92105.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 477

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 17/218 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T++      + + V G++L +    +S +   +T        IST +I+    L
Sbjct: 277 LKGLWQTLELTVIAIILASVWGVLLGILG--VSEYRWVRT--------ISTTIIYIFRGL 326

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ L + ++   P +            P F +  I L     A+    VR G  AV RG
Sbjct: 327 PLMVLAFFIYIGLPGVTG-------VKIPAFTAGIITLILNEGAYTGAFVRGGFEAVNRG 379

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL +  A R V++PQ +R ++P   +Q++  LK++S+  A+G  +L   G  
Sbjct: 380 QMEAARSLGLPYGSAMRRVIMPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGTL 439

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I+ +  Q   +  I   IYL +  ++    N +  K+ 
Sbjct: 440 IVARNSQGFRVWAIIAVIYLIVITLLTWLSNWVEKKLK 477



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L    +I A++ G L+G   +S  + V  I    + +FR +P +V+ FF
Sbjct: 275 ALLKGLWQTLELTVIAIILASVWGVLLGILGVSEYRWVRTISTTIIYIFRGLPLMVLAFF 334

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 335 IYIGLP 340


>gi|118587431|ref|ZP_01544856.1| glutamine ABC transporter, permease/substrate-binding protein
           [Oenococcus oeni ATCC BAA-1163]
 gi|118432081|gb|EAV38822.1| glutamine ABC transporter, permease/substrate-binding protein
           [Oenococcus oeni ATCC BAA-1163]
          Length = 468

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 13/225 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            +L  +        +    K+ V   +L  +  +    L      K  +    + I  F 
Sbjct: 256 WYLLKQNWPSFVNGVIETIKLTVVGIILASIWGILMGVLG-VAESKILRTFSNIIIYIF- 313

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             GLP LV   L + ++   P L        +   P F++  + L+    A+    V+ G
Sbjct: 314 -RGLPLLV---LAFFIYIGLPHL-------LNVKIPAFVAGILTLTLNEGAYTGAFVKGG 362

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
            ++V +GQMEAA + GL++ +A R V++PQ MR  +P L +Q++  LK++S+  A+G  +
Sbjct: 363 FLSVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLKDTSILQAIGLVE 422

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   G  I+ +T Q  +I  I   IYL +  ++    N + +KI 
Sbjct: 423 LTQTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKIK 467



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 38/70 (54%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + + G + T  L   G+I A+I G L+G   ++ +K++     + + +FR +P LV+ 
Sbjct: 263 WPSFVNGVIETIKLTVVGIILASIWGILMGVLGVAESKILRTFSNIIIYIFRGLPLLVLA 322

Query: 146 FFLYKSVLSV 155
           FF+Y  +  +
Sbjct: 323 FFIYIGLPHL 332


>gi|49484629|ref|YP_041853.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257423896|ref|ZP_05600325.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257426579|ref|ZP_05602981.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257429215|ref|ZP_05605602.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257431861|ref|ZP_05608224.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257434821|ref|ZP_05610872.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus M876]
 gi|282906756|ref|ZP_06314604.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282915273|ref|ZP_06323050.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282920997|ref|ZP_06328715.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282925903|ref|ZP_06333551.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus C101]
 gi|283959196|ref|ZP_06376637.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|293497669|ref|ZP_06665523.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293511249|ref|ZP_06669945.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus M809]
 gi|293549857|ref|ZP_06672529.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|295429000|ref|ZP_06821622.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297589505|ref|ZP_06948146.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus MN8]
 gi|49242758|emb|CAG41483.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272914|gb|EEV05016.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257276210|gb|EEV07661.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257279696|gb|EEV10283.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257282740|gb|EEV12872.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257285417|gb|EEV15533.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus M876]
 gi|282312732|gb|EFB43136.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus C101]
 gi|282315412|gb|EFB45796.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus C427]
 gi|282320994|gb|EFB51328.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282329655|gb|EFB59176.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|283471633|emb|CAQ50844.1| L-cystine transport system permease protein TcyB [Staphylococcus
           aureus subsp. aureus ST398]
 gi|283788788|gb|EFC27615.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|290918904|gb|EFD95980.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291096600|gb|EFE26858.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291465875|gb|EFF08405.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus M809]
 gi|295126759|gb|EFG56403.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297578016|gb|EFH96729.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus MN8]
 gi|312437165|gb|ADQ76236.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194906|gb|EFU25294.1| transport system membrane protein [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 239

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+R
Sbjct: 91  GRLLTNDADNQWTLAP-VVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I +
Sbjct: 150 QTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYV 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      + I    +
Sbjct: 210 LVALMYWVVCFIISIIQGIYESYIERGYR 238



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFVLGLIIALFTALMRISTSKVLRSIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|319950980|ref|ZP_08024851.1| putative ABC transporter permease [Dietzia cinnamea P4]
 gi|319435362|gb|EFV90611.1| putative ABC transporter permease [Dietzia cinnamea P4]
          Length = 327

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 13/271 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +   +V+  ++  V      P +          + R       T+         + V
Sbjct: 28  WRWVSATIVLVLVFLFVWGAATNPAYGWDTYARYLFDTRFGMAVFYTIALTVLSMTLAVV 87

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQLHFDKPVLGQF 254
           LG++LS+      R       KA+  +Y+  F    +   L+   L + ++        F
Sbjct: 88  LGVILSVM-----RMSANPVLKAVAWVYLWIFRGTPVYVQLLFWGLIFTIYRQVQFGIPF 142

Query: 255 N------FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                  F     +   F    + L+   AA++AEIVR+G+ +VP GQ EA+ ALG+T  
Sbjct: 143 TDIDFIRFDDTMVLYSAFWLAVVGLAMNEAAYMAEIVRAGISSVPEGQAEASTALGMTWG 202

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEII 367
           +  R  +LPQAMR IIPP  ++++++LK +SL VA+ F+ +L      I     Q I ++
Sbjct: 203 QTMRRTILPQAMRVIIPPTGNEFISMLKTTSLVVAIPFSGELYGQARDISGVNFQPIPLL 262

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+    YL ++ ++ +  + L  + +    +
Sbjct: 263 LVAATWYLVITSVLMVGQHFLEKRFSRGATR 293



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 7/126 (5%)

Query: 83  SSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +YA  +      +    T  L    M  A ++G ++   R+SAN ++  +  VY+ +FR
Sbjct: 56  DTYARYLFDTRFGMAVFYTIALTVLSMTLAVVLGVILSVMRMSANPVLKAVAWVYLWIFR 115

Query: 138 NIPPLVVIFFLYKSVL--SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             P  V + F          +        + F  F +   L            +   +++
Sbjct: 116 GTPVYVQLLFWGLIFTIYRQVQFGIPFTDIDFIRFDDTMVLYSAFWLAVVGLAMNEAAYM 175

Query: 196 LGIVLS 201
             IV +
Sbjct: 176 AEIVRA 181


>gi|21228042|ref|NP_633964.1| glutamine transporter, permease protein [Methanosarcina mazei Go1]
 gi|20906475|gb|AAM31636.1| Glutamine transporter, permease protein [Methanosarcina mazei Go1]
          Length = 231

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 7/211 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++  F+   G++L   A    +       +    +Y+    I G P  V I L Y    
Sbjct: 26  IEVTTFAIFFGLILGTIA-AFGKLSKRAIFRIPSSVYVDF--IRGTPLFVQILLFYYGIP 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +       G        ++     S  + A+ AEIVR+G+ +V RGQMEAA +LG+T
Sbjct: 83  GLII----GITGEPFRIDPILAGIAVCSINSGAYNAEIVRAGIKSVDRGQMEAARSLGMT 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A + V++PQA+R IIPPL ++++ LLK+SSL   +   +L   G   +++T  A   
Sbjct: 139 EGQAMKEVIMPQAVRLIIPPLGNEFIALLKDSSLLAVISVHELSKNGMLYVSKTFAAFPT 198

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   F+YL+L++ I+  +N +  ++ + ++
Sbjct: 199 YISVAFVYLALTMGISRVLNHIERRLGVSDR 229



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    +    I+GT+   G+LS   +      VYV+  R  P  V I   
Sbjct: 18  LLRGAVITIEVTTFAIFFGLILGTIAAFGKLSKRAIFRIPSSVYVDFIRGTPLFVQILLF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
           Y  +  ++            + 
Sbjct: 78  YYGIPGLIIGITGEPFRIDPIL 99


>gi|229492701|ref|ZP_04386502.1| ABC-type amino acid transport system, permease component
           [Rhodococcus erythropolis SK121]
 gi|229320360|gb|EEN86180.1| ABC-type amino acid transport system, permease component
           [Rhodococcus erythropolis SK121]
          Length = 318

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 9/243 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTM--DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              FG     + L    ++       ++ + S    IVL +    + R       K+   
Sbjct: 45  NEQFGWATYRQYLFDARISKAAWVTIQLTILSMAAAIVLGIVL-AVMRLSPNPVLKSAAW 103

Query: 222 LYISTFLIFGLPT-LVLIALKYQLH----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +Y+  F    +   LV   L   ++       P + QF       +   F+   I L+  
Sbjct: 104 VYLWVFRGTPVYVQLVFWGLFPSIYKSIDLGVPFVHQFVHFDMQDLQAAFLFAVIGLALN 163

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AEIVR+G+ +V  GQ EA++ALG+T  +  R  +LPQAMR IIPP  ++ ++LLK
Sbjct: 164 EAAYMAEIVRAGIASVNEGQTEASVALGMTWGQTMRRTVLPQAMRVIIPPTGNELISLLK 223

Query: 337 NSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +SL  AV    +L      I     + I ++++ +  YL+++ ++ +    +    +  
Sbjct: 224 TTSLVTAVPLSTELYGRARDISGANFEPIPLLMVAVTWYLAMTSVLMVGQYYVERHYSKG 283

Query: 396 EKK 398
             +
Sbjct: 284 STR 286



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
             T  L    M  A ++G ++   RLS N ++     VY+ VFR  P  V + F      
Sbjct: 67  WVTIQLTILSMAAAIVLGIVLAVMRLSPNPVLKSAAWVYLWVFRGTPVYVQLVFWGL--- 123

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                P     +  G+   ++ + F    +       V    L
Sbjct: 124 ----FPSIYKSIDLGVPFVHQFVHFDMQDLQAAFLFAVIGLAL 162


>gi|325000380|ref|ZP_08121492.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia sp. P1]
          Length = 306

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I   V+     + V   +        +      +   L     TM       +   VL
Sbjct: 37  RIIASAVLALIAVQLVAFGVGNERFQWDVVAEHLFDPSVLRGLGTTMLLAVLAMLIGSVL 96

Query: 197 GIVLS------LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           G  L+         TR +   +    + +P L    F       L  I++        P 
Sbjct: 97  GGALAAAQLSDFGPTRWAATVYVGVFRGIPPLVQLIFWFNLAYLLPRISI------GVPF 150

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                    + +     +  I LS   +A++AEI+R+G++ V  GQ EAA A+G T  + 
Sbjct: 151 GPTLLSWDANDLITPLTAGVIGLSLVQSAYMAEIIRAGILGVDHGQREAASAMGFTPAQT 210

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQAMR IIPP  SQ++ ++K ++L   +   DL+     I NQT + + ++++ 
Sbjct: 211 FFRIILPQAMRVIIPPSGSQFITVVKGTALVSVIAMNDLLHSVQVIYNQTYEIVPMLIVA 270

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL++  ++ +   RL  + A    +
Sbjct: 271 CLWYLTVVTLLTIGQRRLERRFARGHVR 298



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 45/112 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  LA   M+  +++G  + A +LS      W   VYV VFR IPPLV + F +
Sbjct: 76  LRGLGTTMLLAVLAMLIGSVLGGALAAAQLSDFGPTRWAATVYVGVFRGIPPLVQLIFWF 135

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
                +  I       P  +  +   L  P         +   +++  I+ +
Sbjct: 136 NLAYLLPRISIGVPFGPTLLSWDANDLITPLTAGVIGLSLVQSAYMAEIIRA 187


>gi|255284108|ref|ZP_05348663.1| glutamine ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
 gi|255265365|gb|EET58570.1| glutamine ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
          Length = 230

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 117/241 (48%), Gaps = 16/241 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            +     +  F+ +    + T  + T   + VF+ ++GI +  F   + R  ++KT K  
Sbjct: 3   QNFTDKFYLNFIADDRWKYLTNGLKTTLIVTVFAVLIGIAIG-FLVAVVRSTYDKTKKLK 61

Query: 220 ---PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
               L  +   +I G P +V + + Y + F            GS    + +   +A    
Sbjct: 62  VLNALCKLYLTVIRGTPVVVQLLIIYFVIF------------GSVRIDKTIVAILAFGLN 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           + A++AEI+RSG++++  GQ EA  +LG  + +    ++LPQA+++++P L ++++ LLK
Sbjct: 110 SGAYVAEIIRSGIMSIDNGQFEAGRSLGFNYVQTMIYIVLPQALKNVLPALGNEFIVLLK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+A  +   DL   G  I ++T  A   ++    IYL + +  +  ++ L  ++   E
Sbjct: 170 ETSVAGYIALEDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVLAFSKLLSILERRLRNSE 229

Query: 397 K 397
           +
Sbjct: 230 R 230



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAWICRVYVEVFRNIP 140
              +  G   T  +    ++    IG LV   R +       K++  +C++Y+ V R  P
Sbjct: 19  WKYLTNGLKTTLIVTVFAVLIGIAIGFLVAVVRSTYDKTKKLKVLNALCKLYLTVIRGTP 78

Query: 141 PLVVIFFLYKSVL 153
            +V +  +Y  + 
Sbjct: 79  VVVQLLIIYFVIF 91


>gi|194446396|ref|YP_002041217.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194405059|gb|ACF65281.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 222

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG VL+L      R       + L   YIS F   G 
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFVLALM-----RMSPLWPVRWLARFYISIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  + + Y        L QF             +  I LS  TAA+ +E +R+ + A+
Sbjct: 66  PLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +  R V+LPQA R  +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTLRRVILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 175 AQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 43/101 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|116491766|ref|YP_811310.1| ABC-type amino acid transport system, permease and periplasmic
           component [Oenococcus oeni PSU-1]
 gi|116092491|gb|ABJ57645.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Oenococcus oeni PSU-1]
          Length = 468

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 13/225 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            +L  +        +    K+ V   +L  +  +    L      K  +    + I  F 
Sbjct: 256 WYLLKQNWPSFVNGVIETIKLTVVGIILASIWGILMGVLG-VAESKILRTFSNIIIYIF- 313

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             GLP LV   L + ++   P L        +   P F++  + L+    A+    V+ G
Sbjct: 314 -RGLPLLV---LAFFIYIGLPHL-------LNVKIPAFVAGILTLTLNEGAYTGAFVKGG 362

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
            ++V +GQMEAA + GL++ +A R V++PQ MR  +P L +Q++  LK++S+  A+G  +
Sbjct: 363 FLSVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLKDTSILQAIGLVE 422

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   G  I+ +T Q  +I  I   IYL +  ++    N + +KI 
Sbjct: 423 LTQTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKIK 467



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 38/70 (54%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + + G + T  L   G+I A+I G L+G   ++ +K++     + + +FR +P LV+ 
Sbjct: 263 WPSFVNGVIETIKLTVVGIILASIWGILMGVLGVAESKILRTFSNIIIYIFRGLPLLVLA 322

Query: 146 FFLYKSVLSV 155
           FF+Y  +  +
Sbjct: 323 FFIYIGLPHL 332


>gi|312139901|ref|YP_004007237.1| abc transporter integral membrane subunit [Rhodococcus equi 103S]
 gi|325674219|ref|ZP_08153908.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
 gi|311889240|emb|CBH48554.1| putative ABC transporter integral membrane subunit [Rhodococcus
           equi 103S]
 gi|325554899|gb|EGD24572.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
          Length = 314

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +VV+      V            +      + R  +    T+       V + VL
Sbjct: 30  RWVAAVVVLALFGLFVYGAATNEAFHWDVYGQYLFDKRITAAAWKTIQLTVLAMVIAIVL 89

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQLH----FDKPVL 251
           G+VL++      R       ++   +Y+  F    +   LV   L   ++       P  
Sbjct: 90  GVVLAVM-----RLSPNPVLRSAAWVYLWVFRGTPVYVQLVFWGLFPSIYKTIDVGIPFG 144

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            QF       +   F+   I L+   AA++AEIVR+G+ +V  GQ EA+ ALG++  +  
Sbjct: 145 PQFAHFDIQALEAAFLFAVIGLALNEAAYMAEIVRAGVGSVSEGQTEASTALGMSWAQTM 204

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIW 370
           R  +LPQAMR IIPP  ++ +++LK +SL  AV ++ +L      I       + ++L+ 
Sbjct: 205 RRTVLPQAMRVIIPPTGNELISMLKTTSLVAAVPYSLELYGRARDISGANFYPVPLLLVA 264

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL+++ ++ +    +    +    +
Sbjct: 265 STWYLAITSILMVGQYYIERHYSKGASR 292



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
             T  L    M+ A ++G ++   RLS N ++     VY+ VFR  P  V + F      
Sbjct: 73  WKTIQLTVLAMVIAIVLGVVLAVMRLSPNPVLRSAAWVYLWVFRGTPVYVQLVFWGL--- 129

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                P     +  G+    +   F    ++      V    L
Sbjct: 130 ----FPSIYKTIDVGIPFGPQFAHFDIQALEAAFLFAVIGLAL 168


>gi|256375908|ref|YP_003099568.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255920211|gb|ACU35722.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 283

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 9/233 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G F +   L     T+         + VLG+ ++L      R       +     Y+  F
Sbjct: 58  GFFTHEIMLRGLANTVVLAVVAQAGAIVLGVGIALL-----RRSANPVARWFAAGYVWLF 112

Query: 228 LIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              GLP L+ I L + L   FD   +     +  + +   F++  + L    +A++AEIV
Sbjct: 113 --RGLPVLLQILLWFNLALVFDTISIPMVLEVRTNMLITAFVAALLGLGLNESAYMAEIV 170

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL +V  GQ+EAA A+G+T     R V+LPQAMR IIPP  + ++N+LK +S+A  +G
Sbjct: 171 RAGLNSVDHGQVEAAKAIGMTPATTLRRVVLPQAMRVIIPPTGNNFINMLKGTSMASVIG 230

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           F +L+     I +   Q +E +L     Y+ +    ++  + L         +
Sbjct: 231 FLELIHAANNIASHNLQIMETLLAAAAWYMVVVSAASVGQHFLERAYGKGVAR 283



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT  LA      A ++G  +   R SAN +  W    YV +FR +P L+ I   
Sbjct: 65  MLRGLANTVVLAVVAQAGAIVLGVGIALLRRSANPVARWFAAGYVWLFRGLPVLLQILLW 124

Query: 149 YKSVL 153
           +   L
Sbjct: 125 FNLAL 129


>gi|228474812|ref|ZP_04059543.1| L-cystine transport system permease protein TcyB [Staphylococcus
           hominis SK119]
 gi|228271475|gb|EEK12843.1| L-cystine transport system permease protein TcyB [Staphylococcus
           hominis SK119]
          Length = 239

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 111/209 (53%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  + +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITIVTFILGLIIALF-TALMRISSSKVLRGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   N     T+    +S  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ +R
Sbjct: 91  GRLITGNADEQWTL-SSVVSAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  +P L + +L L+K++SL   +  A++      + + T +   I +
Sbjct: 150 QTIQRIILPQAIRVSVPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTTYEYFTIYI 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      + I    K
Sbjct: 210 LVAVMYWVVCFIISVIQGFYESYIERGYK 238



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 42/103 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     I   II       R+S++K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITIVTFILGLIIALFTALMRISSSKVLRGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +   +    + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLITGNADEQWTLSSVVSAIIGLSLNVGAYASEIIRGGIISI 133


>gi|73661552|ref|YP_300333.1| ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494067|dbj|BAE17388.1| ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 239

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 114/209 (54%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG+V++L  T L R    +  + +   YIS  +I G P +V + + +    + 
Sbjct: 34  ITLVTFLLGLVIALL-TALMRISTSRILRGIARFYIS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   N     T++P  ++  I LS    A+ +EI+R G++++P+GQ EAA ++G+ +R
Sbjct: 91  GRLLTNNSENQWTLAP-VIAAIIGLSLNVGAYASEIIRGGIMSIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  +P L + +L+L+K++SL   +  A++      + + T + + I L
Sbjct: 150 QTIQRIILPQAIRVSVPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYL 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++  N   + +    +
Sbjct: 210 LVALMYWVVCFIISIAQNFYESYLERGYR 238



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 42/103 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   +I  L    R+S ++++  I R Y+ + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFLLGLVIALLTALMRISTSRILRGIARFYISIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  ++    + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLLTNNSENQWTLAPVIAAIIGLSLNVGAYASEIIRGGIMSI 133


>gi|82752008|ref|YP_417749.1| ABC transporter permease [Staphylococcus aureus RF122]
 gi|82657539|emb|CAI81982.1| ABC transporter permease [Staphylococcus aureus RF122]
          Length = 239

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 116/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+ 
Sbjct: 91  GRLLTNDADNQWTLAP-VVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYG 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I +
Sbjct: 150 QTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYV 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  ++++      + I    +
Sbjct: 210 LVALMYWVVCFIMSIIQGIYESYIERGYR 238



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFVLGLIIALFTALMRISTSKILRSISRVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|16760898|ref|NP_456515.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765290|ref|NP_460905.1| ABC-type amino acid transporter permease component [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29141410|ref|NP_804752.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62180526|ref|YP_216943.1| putative ABC-type amino acid transporter, permease component
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|167552820|ref|ZP_02346571.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167993521|ref|ZP_02574615.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168239188|ref|ZP_02664246.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168822992|ref|ZP_02834992.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194735316|ref|YP_002114985.1| amino acid ABC transporter His/Glu/Gln/Arg/opine family, permease
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197248583|ref|YP_002146071.1| amino acid ABC transporter His/Glu/Gln/Arg/opine family, permease
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|204930985|ref|ZP_03221811.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|213053511|ref|ZP_03346389.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213417112|ref|ZP_03350256.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
 gi|213426354|ref|ZP_03359104.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213855799|ref|ZP_03384039.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|224583547|ref|YP_002637345.1| ABC-type amino acid transporter, permease component [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|238912475|ref|ZP_04656312.1| putative ABC-type amino acid transporter, permease component
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|289824074|ref|ZP_06543672.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|25296622|pir||AB0750 probable ABC transporter membrane protein STY2160 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16420486|gb|AAL20864.1| putative ABC-type amino acid transporter [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|16503195|emb|CAD05701.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29137037|gb|AAO68601.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|62128159|gb|AAX65862.1| putative ABC-type amino acid transporter, permease component
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|194710818|gb|ACF90039.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197212286|gb|ACH49683.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197288074|gb|EDY27461.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|204320029|gb|EDZ05234.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205322601|gb|EDZ10440.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205328383|gb|EDZ15147.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205340660|gb|EDZ27424.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|224468074|gb|ACN45904.1| putative ABC-type amino acid transporter, permease component
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|261247118|emb|CBG24941.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267993938|gb|ACY88823.1| putative ABC-type amino acid transporter permease component
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301158466|emb|CBW17976.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312912942|dbj|BAJ36916.1| amine ABC transporter permease protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085430|emb|CBY95211.1| probable amino-acid ABC transporter permease protein yckA
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321224595|gb|EFX49658.1| Cystine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322616945|gb|EFY13853.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618185|gb|EFY15077.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322625855|gb|EFY22674.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322626307|gb|EFY23117.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322632722|gb|EFY29467.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322639064|gb|EFY35757.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322640505|gb|EFY37158.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645986|gb|EFY42503.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322649893|gb|EFY46314.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655501|gb|EFY51809.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322660279|gb|EFY56517.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322662960|gb|EFY59167.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668145|gb|EFY64304.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322674095|gb|EFY70189.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322675552|gb|EFY71626.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322683036|gb|EFY79052.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322686730|gb|EFY82708.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322715002|gb|EFZ06573.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323130230|gb|ADX17660.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323195381|gb|EFZ80561.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323199272|gb|EFZ84367.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323204437|gb|EFZ89443.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207527|gb|EFZ92475.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323211852|gb|EFZ96683.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217512|gb|EGA02231.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323223590|gb|EGA07905.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323231534|gb|EGA15647.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323235977|gb|EGA20056.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240547|gb|EGA24590.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323245439|gb|EGA29439.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323250209|gb|EGA34101.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253980|gb|EGA37804.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255493|gb|EGA39254.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262090|gb|EGA45653.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323266213|gb|EGA49703.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270678|gb|EGA54119.1| amino acid ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 222

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG VL+L      R       + L   YIS F   G 
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFVLALM-----RMSPLWPVRWLARFYISIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  + + Y        L QF             +  I LS  TAA+ +E +R+ + A+
Sbjct: 66  PLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 175 AQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 43/101 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|241762840|ref|ZP_04760903.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241368015|gb|EER62220.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 217

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 12/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+F  + VL + L L    L+R  H K   A    YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLKLFAITLVLAVPLGLVL-ALARLSHFKPLSAAVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ EAA  LG
Sbjct: 74  LPFVPVI--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + + +  R ++LPQ +RSI+PP++++ + L+K++SL   +   DL+     I+ +     
Sbjct: 126 MNYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              ++    YL +++++     RL  + A  +
Sbjct: 185 TPFIVAAAFYLIMTLVLTWGFQRLEKRYAKYD 216



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    ++ A  +G ++   RLS  K ++     Y+ + R  P ++ + F+
Sbjct: 11  LAQGATVTLKLFAITLVLAVPLGLVLALARLSHFKPLSAAVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|218887009|ref|YP_002436330.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|147842971|dbj|BAF62530.1| glutamine ABC transporter, permease protein [Desulfovibrio
           vulgaris]
 gi|218757963|gb|ACL08862.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 223

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 13/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F   +    +      +     I +    +G +L   AT L++    K  +AL  +
Sbjct: 1   MALDFKASVMWESVPLLLGGVHLTIIITLGGLAIGFLLGT-ATGLAKTARGKLPRALADI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I G P +V +     L+F  P+             P   +  IA++  + A+IA
Sbjct: 60  YVEA--IRGTPLIVQVMF---LYFGVPLATGMRI-------PPVTAGIIAIAVNSGAYIA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR  + ++  GQ EA  ++GLT  +    V+ PQA R +IPPL +Q++  LK++SL V
Sbjct: 108 EIVRGAVESIDVGQTEAGRSIGLTRMQTLLYVVWPQAFRRMIPPLGNQFIISLKDTSLLV 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  +L   G  II    +A E+ L    +YL +++ IA  +     K+  +  +
Sbjct: 168 VIGVGELTRQGQEIIAVNFRAFEVWLTVAVMYLVMTLSIARALRVYERKLNARSGR 223



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +   G+    ++GT  G  + +  KL   +  +YVE  R  P +V + FL
Sbjct: 17  LLGGVHLTIIITLGGLAIGFLLGTATGLAKTARGKLPRALADIYVEAIRGTPLIVQVMFL 76

Query: 149 YKSVLSVLPI 158
           Y  V     +
Sbjct: 77  YFGVPLATGM 86


>gi|119960912|ref|YP_949421.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119947771|gb|ABM06682.1| putative amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opine family [Arthrobacter aurescens
           TC1]
          Length = 321

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 127/266 (47%), Gaps = 15/266 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +  ++V   +     S++  P     +    F     ++    T+   A   V  FV
Sbjct: 31  WRWVGTVLVAAGVAAIAWSLVTNPRWEWGVVAEWFTAQSVVNGLIETLKLTAISGVLGFV 90

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
           LG +L+L     S          + + +  +++    P LV + L Y L +    +    
Sbjct: 91  LGFILALMRLSASPLL-------VSVSWTFSWIFRSTPLLVQLLLWYNLGYLYEKISLGI 143

Query: 252 ----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                +F     +T+  +F +  + L+   AA+ AEI+R G+++V +GQ+EAA ALG+  
Sbjct: 144 PFTDVRFFEAQTTTLISQFAAAVLGLTLNQAAYSAEIIRGGILSVDQGQLEAASALGIPA 203

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            K +  ++LPQAMR+I+P   ++ + L+K +S+   + +++L      I N+T Q + ++
Sbjct: 204 WKRSTRIVLPQAMRAILPNAFNEIIGLVKGTSIVYVLAYSELFYTVQVIYNRTQQVLPLL 263

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+    Y+ ++ ++++F   +    +
Sbjct: 264 LVATLWYVVITSVLSVFQYYIERHFS 289



 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 32/65 (49%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A +++ G + T  L     +   ++G ++   RLSA+ L+  +   +  +FR+ P LV +
Sbjct: 67  AQSVVNGLIETLKLTAISGVLGFVLGFILALMRLSASPLLVSVSWTFSWIFRSTPLLVQL 126

Query: 146 FFLYK 150
              Y 
Sbjct: 127 LLWYN 131


>gi|171779738|ref|ZP_02920694.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281840|gb|EDT47274.1| hypothetical protein STRINF_01575 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 517

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 12/215 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               + V S VL ++L    T  +R         L  LYI   +I GLP LV+++L +  
Sbjct: 19  MTVFLSVVSMVLALILGGVVTA-ARMSDNLLISGLTKLYIE--VIRGLPMLVILSLFFYG 75

Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L  + P    F            ++    L+   + F+AEI RSG+ AV  GQ E A
Sbjct: 76  LPMLGLNIPKSTLFG-----VDLDRLIAALTGLTVGESVFVAEIYRSGIQAVDSGQFEGA 130

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G    +A R V++PQA ++I+P L +++ N +K+SS A  +G ADL+    TI   +
Sbjct: 131 RSIGFNKFQAYRYVIIPQAFKNILPTLGNEFSNNIKSSSQASVIGVADLMFTASTIQGIS 190

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +  + ++   F+YL  +      +     K+   
Sbjct: 191 YKPFQAVIAVGFVYLVFTFSTTRIVAHYERKMNRS 225



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 42/71 (59%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SY   IL G + T +L+   M+ A I+G +V A R+S N L++ + ++Y+EV R +P L
Sbjct: 7   ESYGGFILDGALMTVFLSVVSMVLALILGGVVTAARMSDNLLISGLTKLYIEVIRGLPML 66

Query: 143 VVIFFLYKSVL 153
           V++   +  + 
Sbjct: 67  VILSLFFYGLP 77


>gi|116617557|ref|YP_817928.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096404|gb|ABJ61555.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 480

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 17/220 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N   +     T+       + + + G++L +              + L    I  F    
Sbjct: 275 NGAFMRGLWQTLLLTILGIILASIWGVILGVMG-----VSQNSAVRGLSTTLIYIFR--- 326

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              L L+ L + ++   P +         T  P F +  I L     A+    VR G  A
Sbjct: 327 --GLPLMVLAFFIYIGLPGVIG-------TKIPAFTAGLITLILNEGAYTGAFVRGGFEA 377

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LG T+ ++ R V++PQ ++ ++P   +Q++  LK++S+  A+G  +L  
Sbjct: 378 VDKGQMEAARSLGFTYNRSMRKVIMPQGLKIMVPSFINQFIITLKDTSILSAIGILELTQ 437

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  I+++  Q   +  I   IYL +  ++    N +  +
Sbjct: 438 TGTLIVSRNSQGFRVWAIVAVIYLVVITLLTWLSNWVEKR 477



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A + G   T  L   G+I A+I G ++G   +S N  V  +    + +FR +P +V+ FF
Sbjct: 277 AFMRGLWQTLLLTILGIILASIWGVILGVMGVSQNSAVRGLSTTLIYIFRGLPLMVLAFF 336

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 337 IYIGLP 342


>gi|257869938|ref|ZP_05649591.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804102|gb|EEV32924.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 489

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 18/230 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        LS    T+       +F  + G +L+       +    K  + + ++YI  
Sbjct: 278 FFSKYLPFYLSGAGYTIFLAFVGVLFGSIAGSLLAFM-----KLSASKILRWIAIVYIE- 331

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV I + Y           F          +  +  IAL+  +AA++AEI+R
Sbjct: 332 -YVRGTPLLVQIFIVY-----------FGTGVLGLDLSKLTAGCIALALNSAAYVAEIIR 379

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+   +G 
Sbjct: 380 AGINAVNKGQLEAARSLGMNQVQAMRFIIFPQAIKNILPALGNEFVTVIKESSVVSVIGV 439

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++L+   G +   + +     +I   IY  L+  ++  +     ++   +
Sbjct: 440 SELIFQTGIVQGASFKPFLPYVIVSLIYFVLTFALSRLLGVAERRMKTSD 489



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 40/70 (57%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y    L G   T +LAF G++  +I G+L+   +LSA+K++ WI  VY+E  R  P L
Sbjct: 280 SKYLPFYLSGAGYTIFLAFVGVLFGSIAGSLLAFMKLSASKILRWIAIVYIEYVRGTPLL 339

Query: 143 VVIFFLYKSV 152
           V IF +Y   
Sbjct: 340 VQIFIVYFGT 349


>gi|150019589|ref|YP_001311843.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149906054|gb|ABR36887.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 219

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 111/234 (47%), Gaps = 17/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F    +   L    +T+       +   +LG+ L+L      R    K    +   
Sbjct: 1   MNFTFLGKYSEYYLKGAEITIVLAFFAVLCGTILGLALTLL-----RRSKFKPISYIAAA 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    + G P LV I   Y ++   P L   +        P+     IAL+  +AA+I+
Sbjct: 56  YVEF--VRGTPLLVQI---YIIYIGLPKLIGID-------MPDMTVGSIALALNSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AV +GQMEAA +LG+    A   V++PQA ++I+P L +++++++K SS+  
Sbjct: 104 EIIRAGIEAVDKGQMEAARSLGMNQGLAMVHVIIPQAFKNILPALGNEFISVIKESSMVS 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G A+L+     +   T   +E I++   +Y  L+  +   +  +  ++   +
Sbjct: 164 VIGVAELMYNASIVRGNTALGLEPIIVAAVVYFVLTFTLTRCLGYVERRMKASD 217



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 37/77 (48%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T    Y+   L G   T  LAF  ++  TI+G  +   R S  K +++I   YVE  R 
Sbjct: 3   FTFLGKYSEYYLKGAEITIVLAFFAVLCGTILGLALTLLRRSKFKPISYIAAAYVEFVRG 62

Query: 139 IPPLVVIFFLYKSVLSV 155
            P LV I+ +Y  +  +
Sbjct: 63  TPLLVQIYIIYIGLPKL 79


>gi|300693430|ref|YP_003749403.1| amino acid transmembrane ABC transporter protein [Ralstonia
           solanacearum PSI07]
 gi|299075467|emb|CBJ34761.1| putative amino acid transmembrane ABC transporter protein
           [Ralstonia solanacearum PSI07]
          Length = 262

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-Q 243
           T  K+ + S + G++L + A  L +       +     YI  ++I G P LV I   +  
Sbjct: 60  TTVKLTLASALAGVLLGVVA-ALGKLSPVWLLRQASSFYI--WVIRGTPLLVQILFVFLA 116

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P L             +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +L
Sbjct: 117 LPAWLPWLQ----------MDDFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSL 166

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+       V+ PQA +  +PPL + +++LLK+SSLA A+G  +L +VG  +   T Q 
Sbjct: 167 GLSRWHTFADVIFPQAFKVALPPLVNNFISLLKDSSLAYAIGVVELTNVGNRLQAATFQP 226

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ++    IYL L+ ++  F N +  ++ ++ ++
Sbjct: 227 LPALVTTAVIYLVLTTVLTQFSNAVEQRMDVEGRR 261



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A     G   T  L  +  +   ++G +   G+LS   L+      Y+ V R  P LV I
Sbjct: 51  AQIFADGTRTTVKLTLASALAGVLLGVVAALGKLSPVWLLRQASSFYIWVIRGTPLLVQI 110

Query: 146 FFLYKSVLSVLPI 158
            F++ ++ + LP 
Sbjct: 111 LFVFLALPAWLPW 123


>gi|163856808|ref|YP_001631106.1| polar amino acid transport system permease protein [Bordetella
           petrii DSM 12804]
 gi|163260536|emb|CAP42838.1| polar amino acid transport system permease protein [Bordetella
           petrii]
          Length = 222

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 13/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   + +LG V+ L       +   +    L  LY+  F   G P LV + + +  
Sbjct: 21  VTVEVTACALLLGCVIGLLVGVGRLNPQRRGLYGLCSLYLLCF--RGTPLLVQLFIWF-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F       + P F    + L  Y+ A+++EIVR  + +V RGQ EAA +LG
Sbjct: 77  ---------FGLPQFGIMLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A R+++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++
Sbjct: 128 MSSGQAMRIIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E  L+   IYL L+      + R+  ++ 
Sbjct: 188 ETYLVIALIYLVLTTATTTVLRRIEHRLR 216



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEV 135
           + ++   +   A+L G   T  +    ++   +IG LVG GRL+   + +  +C +Y+  
Sbjct: 3   LDFSPVFADFDALLRGAAVTVEVTACALLLGCVIGLLVGVGRLNPQRRGLYGLCSLYLLC 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FR  P LV +F  +  +     +         G+ + 
Sbjct: 63  FRGTPLLVQLFIWFFGLPQFGIMLPAFACGVLGLGMY 99


>gi|320538105|ref|ZP_08038002.1| ABC transporter, permease protein [Treponema phagedenis F0421]
 gi|320145039|gb|EFW36758.1| ABC transporter, permease protein [Treponema phagedenis F0421]
          Length = 229

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 12/235 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L     T+        F  ++GIVL      L R   +K  + +   
Sbjct: 1   MNFSFLAKYWLYYLIGIKNTVLLALFTVAFGVLIGIVL-----VLGRISKQKWLRFISTA 55

Query: 223 YISTFLIFGLPTLVLIALKYQ----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           Y+    I G P LV + + Y     L    P     + I G     +F+   I L+  + 
Sbjct: 56  YVEF--IRGTPLLVQLFIIYYGLPALGIKFPNNKLLSSIIGMPF-SDFIPGVITLAINSG 112

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+I EI RSG+ A+  GQ EAA +LGL++R+  RL++ PQA ++ +P L ++++ ++K S
Sbjct: 113 AYICEIFRSGIQAIEIGQTEAARSLGLSYRQTLRLIIFPQAFKTALPTLGNEFIAVIKES 172

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+   +G ADL+     I   T    E +LI    Y  L+  ++  +  +  ++ 
Sbjct: 173 SIVSVIGIADLMYKANVIRGNTFLPFEPLLIAALCYFLLTYPLSKLLGYIEKRMK 227



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 40/81 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L+G  NT  LA   +    +IG ++  GR+S  K + +I   YVE  R  P LV 
Sbjct: 9   YWLYYLIGIKNTVLLALFTVAFGVLIGIVLVLGRISKQKWLRFISTAYVEFIRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           +F +Y  + ++     ++ +L
Sbjct: 69  LFIIYYGLPALGIKFPNNKLL 89


>gi|282902328|ref|ZP_06310221.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus C160]
 gi|282596787|gb|EFC01746.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           subsp. aureus C160]
          Length = 239

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 118/209 (56%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  +++  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKVLRSIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+R
Sbjct: 91  GRLLTNDADNQWTLAP-VVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      +++ T + + I +
Sbjct: 150 QTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVVSTTYEYLTIYV 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      + I    +
Sbjct: 210 LVALMYWVVCFIISIIQGIYESYIERGYR 238



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFVLGLIIALFTALMRISTSKVLRSIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|239636041|ref|ZP_04677055.1| L-cystine transport system permease protein TcyB [Staphylococcus
           warneri L37603]
 gi|239598312|gb|EEQ80795.1| L-cystine transport system permease protein TcyB [Staphylococcus
           warneri L37603]
          Length = 239

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 115/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  K +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKVLKGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ +R
Sbjct: 91  GRLLTNDADNQWTLAP-VIAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L L+K++SL   +  A++      + + + + + I L
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTSYEYLTIYL 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++  +   + I    +
Sbjct: 210 LVALMYWVVCFIISVIQSFYESYIERGYR 238



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFVLGLIIALFTALMRISTSKVLKGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLLTNDADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|282882686|ref|ZP_06291296.1| arginine transport system permease protein ArtQ [Peptoniphilus
           lacrimalis 315-B]
 gi|300814297|ref|ZP_07094569.1| putative arginine ABC transporter, permease protein ArtQ
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|281297499|gb|EFA89985.1| arginine transport system permease protein ArtQ [Peptoniphilus
           lacrimalis 315-B]
 gi|300511564|gb|EFK38792.1| putative arginine ABC transporter, permease protein ArtQ
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 225

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 13/219 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L    +T+  +    +    +GIVL+L      +    K  K +   YI   ++ G P 
Sbjct: 18  YLKGAGVTIKLSLIGVILGLTIGIVLALM-----KISKNKLLKFIASAYIE--IVRGTPM 70

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I + Y        L +        +    +   +++S  +AA++AEI+RSG+ +V  
Sbjct: 71  LVQIMIVYF------GLKKIIPDSLPYLKAPMLLCALSISLNSAAYVAEIIRSGINSVDN 124

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGLT  +A R ++LPQA+++I+P L ++++ L+K SS+   VG A+L+  G 
Sbjct: 125 GQMEAARSLGLTRSQAMRKIILPQAVKNILPALVNEFITLIKESSIVYTVGVAELMYSGK 184

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +I + T QA+   +    IY  ++  ++  +  L  +++
Sbjct: 185 SIASATYQAVRPFIYAAIIYFIMTYSLSKALQVLERRLS 223



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 39/75 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++  A L G   T  L+  G+I    IG ++   ++S NKL+ +I   Y+E+ R  P LV
Sbjct: 13  TFLPAYLKGAGVTIKLSLIGVILGLTIGIVLALMKISKNKLLKFIASAYIEIVRGTPMLV 72

Query: 144 VIFFLYKSVLSVLPI 158
            I  +Y  +  ++P 
Sbjct: 73  QIMIVYFGLKKIIPD 87


>gi|189423783|ref|YP_001950960.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           lovleyi SZ]
 gi|189420042|gb|ACD94440.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           lovleyi SZ]
          Length = 755

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 15/206 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   I VF+ + G +L        R    +   A   LYI   ++ G P LVL+ L + +
Sbjct: 551 TTVVISVFATLFGTLLGALIC-FMRMAKSRLLSAPARLYI--AILRGTPVLVLLMLIFYV 607

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F             S      +   IA      A+ AEI R+G+  V +GQ EA I+LG
Sbjct: 608 VF------------ASININPVIVAVIAFGMNFGAYTAEIFRTGIEGVEKGQTEAGISLG 655

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T       ++LPQ +R I+P    ++++L+K +S+   +   DL      I ++T  A 
Sbjct: 656 FTRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAF 715

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
             +++   +Y  +S  +   +  L  
Sbjct: 716 FPLVMVAILYFLISWTLMQSLEYLER 741



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++    +  T++G L+   R++ ++L++   R+Y+ + R  P LV++  +
Sbjct: 545 ILDGLKTTVVISVFATLFGTLLGALICFMRMAKSRLLSAPARLYIAILRGTPVLVLLMLI 604

Query: 149 YKSVL-SVLPIPDHSIVLPFGM 169
           +  V  S+   P    V+ FGM
Sbjct: 605 FYVVFASININPVIVAVIAFGM 626


>gi|70725641|ref|YP_252555.1| hypothetical protein SH0640 [Staphylococcus haemolyticus JCSC1435]
 gi|68446365|dbj|BAE03949.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 241

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 112/207 (54%), Gaps = 4/207 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F+LG++++LF T L R    K  K +  +Y+S  +I G P +V + + +    + 
Sbjct: 36  ITIVTFILGLIIALF-TALMRISTSKVLKGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 92

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   N     T+    +S  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ +R
Sbjct: 93  GRLVTGNADEQWTL-SSVISAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYR 151

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T +   I +
Sbjct: 152 QTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYFTIYI 211

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   +Y  +  +I++  +   + I   
Sbjct: 212 LVAVMYWVICFIISVIQSFYESYIERG 238



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 41/106 (38%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              +  +     I   II       R+S +K++  I RVYV + R  P +V +F ++  +
Sbjct: 30  LKYSIPITIVTFILGLIIALFTALMRISTSKVLKGIARVYVSIIRGTPMIVQLFIIFYGI 89

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +   +    + +      +   +L +   A   +   ++ I
Sbjct: 90  PELGRLVTGNADEQWTLSSVISAIIGLSLNVGAYASEIIRGGIISI 135


>gi|152964896|ref|YP_001360680.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
 gi|151359413|gb|ABS02416.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
          Length = 329

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +    V      +V +++  P            +   L    LT++          VL
Sbjct: 42  RWVATAAVAVLAAMAVHALVTNPAWDWPTVGEFLFSATILESLWLTVELTLVGTAIGLVL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKP 249
           G VL+L      R       KA+   Y+S F    +P ++ +   Y        + F  P
Sbjct: 102 GTVLALM-----RMSGNPLLKAVSFTYVSVF--RSVPLILQLLFWYNMAILYDRIGFGVP 154

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              QF  I    +     + ++ L  + AA+ AEIVRSG +AV  GQ EAA ALG+   +
Sbjct: 155 FGPQFWTISTQDLIGPVTAAFLGLGLHQAAYFAEIVRSGFLAVDPGQREAAAALGIPRLR 214

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R + LPQA+R I+P   ++ + LLK +S+   +   +L      + N+TGQ I ++L+
Sbjct: 215 QFRRIQLPQALRVIVPTTGNEVIGLLKGTSVVYVMALPELFYQVQVVYNRTGQVIPLLLV 274

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y  L+  ++     +         +
Sbjct: 275 AAVWYFVLTTALSALQWLVERHYGRGSSR 303



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 53/150 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  L   G     ++GT++   R+S N L+  +   YV VFR++P ++ + F 
Sbjct: 80  ILESLWLTVELTLVGTAIGLVLGTVLALMRMSGNPLLKAVSFTYVSVFRSVPLILQLLFW 139

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y   +    I       P    ++ + L  P         +   ++   IV S F     
Sbjct: 140 YNMAILYDRIGFGVPFGPQFWTISTQDLIGPVTAAFLGLGLHQAAYFAEIVRSGFLAVDP 199

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
                     +P L     +       V++
Sbjct: 200 GQREAAAALGIPRLRQFRRIQLPQALRVIV 229


>gi|319940984|ref|ZP_08015321.1| hypothetical protein HMPREF9464_00540 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805557|gb|EFW02352.1| hypothetical protein HMPREF9464_00540 [Sutterella wadsworthensis
           3_1_45B]
          Length = 252

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 105/236 (44%), Gaps = 10/236 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI- 229
                +     T+            LG +L +     +R+   K      + +  T  + 
Sbjct: 12  YWPLFVHGAWTTVQVTIICVCLGMCLGTLLGMGRLAQARYNPLKGFLHYCVRWPITVYVS 71

Query: 230 --FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-------SPEFMSLYIALSCYTAAF 280
              G P  V I L Y       +      +    +           ++   A++  + A+
Sbjct: 72  FFRGTPLFVQIFLMYFAVLPVFIHPVDGLLISGQLARDIRSNYGAMLAGVCAITLNSGAY 131

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EI R+G+ ++ +GQMEAA +LG+++ +A R ++LPQA R ++P L +  + +LK+SSL
Sbjct: 132 MCEIFRAGIQSLDKGQMEAARSLGMSYMQAMRTIILPQAFRRMLPALGNNAIAILKDSSL 191

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             A+G A+L     T+   + +  E  +    +Y  +++++A  + RL A++   +
Sbjct: 192 ISAIGLAELAYAARTVAGASARYWEPYITISCVYWVMTLLLAWGIRRLEARLGRGD 247



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVYVE 134
           Y    + G   T  +    +     +GTL+G GRL+  +           V W   VYV 
Sbjct: 12  YWPLFVHGAWTTVQVTIICVCLGMCLGTLLGMGRLAQARYNPLKGFLHYCVRWPITVYVS 71

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            FR  P  V IF +Y +VL V   P   +++   +
Sbjct: 72  FFRGTPLFVQIFLMYFAVLPVFIHPVDGLLISGQL 106


>gi|260599090|ref|YP_003211661.1| hypothetical protein CTU_32980 [Cronobacter turicensis z3032]
 gi|260218267|emb|CBA33210.1| hypothetical protein CTU_32980 [Cronobacter turicensis z3032]
          Length = 268

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 15/243 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYISTFL- 228
                +    +T+       +   + G+ L L     + H   K   + L    +  ++ 
Sbjct: 26  YGPLFMQGAWMTIKCTIICVILGTLWGLTLGLGRMAHAEHGPWKYVLRYLVQFPVRFYVS 85

Query: 229 -IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSC 275
              G P  V I + +       +  +  ++  S +               F+S  +A++ 
Sbjct: 86  AFRGTPLFVQIMVVHFALVPLFINPRDGWLVESGMMSSEFARMLRSDYGAFLSCIVAITL 145

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+++EI R+G+ ++ RGQMEA+ ALG+   K  R V+LPQA R I+PPL +  + ++
Sbjct: 146 NAGAYVSEIFRAGIQSIDRGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNAIAIV 205

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+SSLA A+G ADL     T+        E  L    +Y  ++ +++  + RL  +    
Sbjct: 206 KDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSQLVARLEKRFGKS 265

Query: 396 EKK 398
           + +
Sbjct: 266 DSR 268



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVY 132
             Y    + G   T       +I  T+ G  +G GR++             LV +  R Y
Sbjct: 24  QEYGPLFMQGAWMTIKCTIICVILGTLWGLTLGLGRMAHAEHGPWKYVLRYLVQFPVRFY 83

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V  FR  P  V I  ++ +++ +   P    ++  GM  +       +      + I   
Sbjct: 84  VSAFRGTPLFVQIMVVHFALVPLFINPRDGWLVESGMMSSEFARMLRSDYGAFLSCIVAI 143

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 144 TLNAGAYVS 152


>gi|66043626|ref|YP_233467.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254333|gb|AAY35429.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330971784|gb|EGH71850.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 222

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +  +Y+S F   G P LV + + Y   +  P L       G  + P 
Sbjct: 42  ALMRLSRIKPVNWIARIYVSFF--RGTPLLVQLFVIY---YGLPEL-------GIQLEP- 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +P
Sbjct: 89  LSAALIGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   
Sbjct: 149 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQ 208

Query: 386 NRLNAKIALKE 396
           N+L A++   +
Sbjct: 209 NKLEARVNRHD 219



 Score = 43.8 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  K V WI R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRIKPVNWIARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +       G  LN 
Sbjct: 76  YYGLPELGIQLEPLSAALIGFSLNM 100


>gi|207724231|ref|YP_002254628.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206589447|emb|CAQ36408.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 262

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-Q 243
           T  K+ + S + G++L + A  L +       +     YI  ++I G P LV I   +  
Sbjct: 60  TTVKLTLASALAGVLLGVMA-ALGKLSPVWLLRQAASFYI--WVIRGTPLLVQILFVFLA 116

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P L             +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +L
Sbjct: 117 LPAWLPWLQ----------MDDFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSL 166

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+       V+ PQA +  +PPL + ++ LLK+SSLA A+G  +L +VG  +   T Q 
Sbjct: 167 GLSRWHTFADVIFPQAFKVALPPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQP 226

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ++    IYL+L+ ++  F N +  ++ ++ ++
Sbjct: 227 LPALVTTAVIYLALTTVLTQFSNAVEQRMDVEGRQ 261



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 33/75 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S A     G   T  L  +  +   ++G +   G+LS   L+      Y+ V R  P LV
Sbjct: 49  SNAQIFADGTRTTVKLTLASALAGVLLGVMAALGKLSPVWLLRQAASFYIWVIRGTPLLV 108

Query: 144 VIFFLYKSVLSVLPI 158
            I F++ ++ + LP 
Sbjct: 109 QILFVFLALPAWLPW 123


>gi|322419252|ref|YP_004198475.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320125639|gb|ADW13199.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 261

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 111/225 (49%), Gaps = 15/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 + F    +    ++ + + +L IV+ L    L R    +       LY+   +I
Sbjct: 50  DPYLNIIKFVPDGIAVTFQVTLGAILLAIVIGLVTG-LGRISKNRFFNGAASLYVE--II 106

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV I   Y              +G     P  +S  IA++    A++ E+VR+G+
Sbjct: 107 RGIPLLVQIFYIYY------------ALGTVVKVPAILSAIIAMAVCYGAYMGEVVRAGI 154

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EAA++LG+  R+A   V+LPQA++ I+PP+ ++++ LLK+SSL   +  ADL
Sbjct: 155 ESIAKGQREAALSLGMNGRQAMIHVILPQAVKVILPPVGNEFIALLKDSSLVSIIAVADL 214

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  G    +++    E   +   IYL +++  +  +  +  ++++
Sbjct: 215 LRRGREYASESFTYFETYTVIALIYLIITLFFSKIIGVMEERVSV 259



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 40/68 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF +    ++ A +IG + G GR+S N+       +YVE+ R IP LV IF++Y +
Sbjct: 62  GIAVTFQVTLGAILLAIVIGLVTGLGRISKNRFFNGAASLYVEIIRGIPLLVQIFYIYYA 121

Query: 152 VLSVLPIP 159
           + +V+ +P
Sbjct: 122 LGTVVKVP 129


>gi|323485584|ref|ZP_08090928.1| hypothetical protein HMPREF9474_02679 [Clostridium symbiosum
           WAL-14163]
 gi|323692932|ref|ZP_08107154.1| hypothetical protein HMPREF9475_02017 [Clostridium symbiosum
           WAL-14673]
 gi|323401102|gb|EGA93456.1| hypothetical protein HMPREF9474_02679 [Clostridium symbiosum
           WAL-14163]
 gi|323503015|gb|EGB18855.1| hypothetical protein HMPREF9475_02017 [Clostridium symbiosum
           WAL-14673]
          Length = 230

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 16/235 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F+      +    +     + + + +LGIV+ L    + R  +EKT K   L +I 
Sbjct: 9   FYFNFIEKDRWLYLVDGLKITLTVTLLAVILGIVIGLIVGVI-RSTYEKTHKLKILNFIC 67

Query: 226 ---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I G P +V + + Y + F            GS    +     +A    + A++A
Sbjct: 68  NLYLTVIRGTPVVVQLMIIYYVIF------------GSLRVDKVPVAVLAFGINSGAYVA 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG++++  GQ EA  +LG  + +    +++PQA ++I+P L +++++LLK +S+A 
Sbjct: 116 EIFRSGIMSIDNGQFEAGRSLGFNYPQTMWYIIMPQAFKNILPALCNEFISLLKETSVAG 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   DL   G  I + T  A   +L    IYL + I+    +  L  ++   E+
Sbjct: 176 FIALQDLTKGGDIIRSITYSATMPLLAVAAIYLIIVIIFTQLIKCLERRLRQSER 230


>gi|322690626|ref|YP_004220196.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320455482|dbj|BAJ66104.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 327

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+      +  ++  P       +    N   L     T++      V + +L +
Sbjct: 29  VAAVIVVLLAAMLIQGLITNPRLDWPTVWKYLFNENVLEGIRYTLELTVISMVVAIILSV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 89  ILAIM-----RKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGLFAVLIPKISLGIPFTSV 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
           F YL ++ ++ +  +RL A   
Sbjct: 264 FWYLLITSILMVVQSRLEAHFG 285



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+ A+++ ++    +  +  N  + +      +L                        +L
Sbjct: 28  IVAAVIVVLLAAMLIQGLITN-PRLDWPTVWKYLFNEN--------------------VL 66

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F   
Sbjct: 67  EGIRYTLELTVISMVVAIILSVILAIMRKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGL 126

Query: 151 SVLSVLP 157
             + +  
Sbjct: 127 FAVLIPK 133


>gi|83748398|ref|ZP_00945421.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum
           UW551]
 gi|207738968|ref|YP_002257361.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83724914|gb|EAP72069.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum
           UW551]
 gi|206592339|emb|CAQ59245.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 262

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-Q 243
           T  K+ + S + G++L + A  L +       +     YI  ++I G P LV I   +  
Sbjct: 60  TTVKLTLASALAGVLLGVMA-ALGKLSPVWLLRQAASFYI--WVIRGTPLLVQILFVFLA 116

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P L             +F S  +AL+    A+ AE +R+GL+AVP+GQ+EAA +L
Sbjct: 117 LPAWLPWLQ----------MDDFTSACVALAFNAGAYNAESIRAGLLAVPKGQLEAAHSL 166

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+       V+ PQA +  +PPL + ++ LLK+SSLA A+G  +L +VG  +   T Q 
Sbjct: 167 GLSRWHTFADVIFPQAFKVALPPLVNNFIALLKDSSLAYAIGVVELTNVGNRLQAATFQP 226

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  ++    IYL+L+ ++  F N +  ++ ++ ++
Sbjct: 227 LPALVTTAVIYLTLTTVLTQFSNAVEQRMDVEGRQ 261



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 33/75 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S A     G   T  L  +  +   ++G +   G+LS   L+      Y+ V R  P LV
Sbjct: 49  SNAQIFADGTRTTVKLTLASALAGVLLGVMAALGKLSPVWLLRQAASFYIWVIRGTPLLV 108

Query: 144 VIFFLYKSVLSVLPI 158
            I F++ ++ + LP 
Sbjct: 109 QILFVFLALPAWLPW 123


>gi|282917762|ref|ZP_06325512.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|283767496|ref|ZP_06340411.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus H19]
 gi|282318047|gb|EFB48407.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus D139]
 gi|283461375|gb|EFC08459.1| polar amino acid transport system permease [Staphylococcus aureus
           subsp. aureus H19]
          Length = 239

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 115/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +F LG++++LF T L R    K  +++  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFALGLIIALF-TALMRISTSKILRSISRVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+T+ 
Sbjct: 91  GRLLTNDADNQWTLAP-VVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYG 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++      + + T + + I +
Sbjct: 150 QTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYV 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++      + I    +
Sbjct: 210 LVALMYWVVCFIISIIQGIYESYIERGYR 238



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 40/103 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +         II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFALGLIIALFTALMRISTSKILRSISRVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|238020503|ref|ZP_04600929.1| hypothetical protein GCWU000324_00385 [Kingella oralis ATCC 51147]
 gi|237867483|gb|EEP68489.1| hypothetical protein GCWU000324_00385 [Kingella oralis ATCC 51147]
          Length = 279

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 11/239 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL--SRHFHEKTGKALPLL--YIST 226
             +  L+    T+       +F  +LG + +L       + +   +    L     ++  
Sbjct: 41  YRHMFLTGAVATVVITVIATLFGTILGTIGALMRIMRFENGNVFMRAFAWLCRTISWLYI 100

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFI-------GGSTVSPEFMSLYIALSCYTAA 279
               G P  V I + Y + F   V  Q   I               +++  +AL+  T A
Sbjct: 101 TFFRGTPMYVQIFIWYFVWFVALVHPQHGLIVSGSEAVALRREYGAWIAGCLALTANTGA 160

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI R+G+ ++ +GQMEAA +LGLT+ +A R ++LPQA+R ++PPL ++++ LLK+SS
Sbjct: 161 YITEIFRAGIQSIDKGQMEAARSLGLTYPQAMRFIILPQALRRMLPPLANEFITLLKDSS 220

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L   +   +L  V  TI  +     E +     +YL+++I ++ F + L  + +   +K
Sbjct: 221 LLAMIAVPELAYVQKTISGRYSIYEEPLYTVALVYLAMTICLSAFFSWLEKRFSTGHRK 279



 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 51/163 (31%), Gaps = 13/163 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----------KLVAWICRVYV 133
           Y    L G V T  +     +  TI+GT+    R+               L   I  +Y+
Sbjct: 41  YRHMFLTGAVATVVITVIATLFGTILGTIGALMRIMRFENGNVFMRAFAWLCRTISWLYI 100

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
             FR  P  V IF  Y      L  P H +++     +  R      +           +
Sbjct: 101 TFFRGTPMYVQIFIWYFVWFVALVHPQHGLIVSGSEAVALRREYGAWIAGCLALTANTGA 160

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           ++  I  +   +        +  ++L L Y        LP  +
Sbjct: 161 YITEIFRAGIQS--IDKGQMEAARSLGLTYPQAMRFIILPQAL 201


>gi|157371175|ref|YP_001479164.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322939|gb|ABV42036.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 220

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L    LT+  +        +LG +L+L      R         L  
Sbjct: 2   HESIQLALDSAPFLLKGAILTLQLSLGGMALGLMLGFLLALM-----RLSPLWPLSWLSR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+S F   G P +  + + Y        L QF           F +  I LS  TAA+ 
Sbjct: 57  FYVSLF--RGTPLIAQLFMIYY------GLPQFG-----IEFDPFPAALIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R V+LPQA R+ +PPL + ++ L+K++SLA
Sbjct: 104 SETLRAAISSIEKGQWEAAASIGMTRWQTLRRVILPQAARTALPPLGNSFIGLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATLLSALQNRLEAHVNRQDQE 220



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G L+   RLS    ++W+ R YV +FR  P +  +F +
Sbjct: 15  LLKGAILTLQLSLGGMALGLMLGFLLALMRLSPLWPLSWLSRFYVSLFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIEFDPFPAALIGLSLN 98


>gi|94986573|ref|YP_594506.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94730822|emb|CAJ54184.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 261

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 18/232 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG       L+F    +    ++   S +  + L L      R    +    L   Y+  
Sbjct: 45  FGSENYIDILAFLPDGIFVTFEVTFLSIICTLPLGLLVG-FGRLSKNRIINILTSTYVE- 102

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G+P LV +   Y                        +S  IA++    A++ E+ R
Sbjct: 103 -VIRGIPLLVQLFYIYY---------------ALGHFSPLVSAIIAITFCYGAYMGEVFR 146

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++ VP+GQ EAA +LG    +  R V+LPQA+R+I+PP+ ++ + +LK++SL   +  
Sbjct: 147 AGILTVPKGQEEAARSLGFNKYQTMRYVILPQALRAILPPIGNECIAMLKDTSLISIIAV 206

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ADL+  G      T +  E   +   +YL ++++++  ++ +  K+   +++
Sbjct: 207 ADLLRRGREYAAVTFEYFETYTVIAIVYLIITLLLSKGVSIMEGKLDHYDQE 258



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 42/76 (55%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF + F  +I    +G LVG GRLS N+++  +   YVEV R IP LV +F++Y +
Sbjct: 60  GIFVTFEVTFLSIICTLPLGLLVGFGRLSKNRIINILTSTYVEVIRGIPLLVQLFYIYYA 119

Query: 152 VLSVLPIPDHSIVLPF 167
           +    P+    I + F
Sbjct: 120 LGHFSPLVSAIIAITF 135


>gi|23465743|ref|NP_696346.1| permease protein of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|227546355|ref|ZP_03976404.1| ABC superfamily ATP binding cassette transporter permease protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|23326428|gb|AAN24982.1| permease protein of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|227213336|gb|EEI81208.1| ABC superfamily ATP binding cassette transporter permease protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
          Length = 327

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+      +  ++  P       +    N   L     T++      V + +L +
Sbjct: 29  VAAVIVVLLAAMLIQGLITNPRLDWPTVWKYLFNENVLEGIRYTLELTVISMVVAIILSV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 89  ILAIM-----RKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGLFAVLIPKISLGIPFTSV 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
           F YL ++ ++ +  +RL A   
Sbjct: 264 FWYLLITSILMVVQSRLEAHFG 285



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+ A+++ ++    +  +  N  + +      +L                        +L
Sbjct: 28  IVAAVIVVLLAAMLIQGLITN-PRLDWPTVWKYLFNEN--------------------VL 66

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F   
Sbjct: 67  EGIRYTLELTVISMVVAIILSVILAIMRKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGL 126

Query: 151 SVLSVLP 157
             + +  
Sbjct: 127 FAVLIPK 133


>gi|255528435|ref|ZP_05395231.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296188320|ref|ZP_06856712.1| putative ectoine/hydroxyectoine ABC transporter, permease protein
           EhuC [Clostridium carboxidivorans P7]
 gi|255507869|gb|EET84313.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296047446|gb|EFG86888.1| putative ectoine/hydroxyectoine ABC transporter, permease protein
           EhuC [Clostridium carboxidivorans P7]
          Length = 215

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           ++ V + V+G +L +F   L +       + +   Y  T++  G P L
Sbjct: 10  LPILLKGSVMTIELTVIALVVGTILGVFL-ALLKLSKNVVFRIISSFY--TWIFRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P +              F +  I LS    A++AEI+R G+ ++ +G
Sbjct: 67  LQLFFFY---YGLPFM--------GVELTPFSAAAIGLSLNCGAYMAEIIRGGIQSIDKG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG T+    + ++LPQ  + IIPP+ ++++ LLK++SL   +   +L+     
Sbjct: 116 QFEAAKALGFTYADTMKKIILPQTFKVIIPPVGNEFIALLKDTSLVSTIAMVELMRSAQQ 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I   T + IE+      +YL L+ +          K+++ 
Sbjct: 176 IYASTFRPIEVFFTAGILYLLLTTIFTGVFGVFEKKLSVY 215



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L    ++  TI+G  +   +LS N +   I   Y  +FR  P L+ +FF 
Sbjct: 13  LLKGSVMTIELTVIALVVGTILGVFLALLKLSKNVVFRIISSFYTWIFRGTPLLLQLFFF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +            G+ LN
Sbjct: 73  YYGLPFMGVELTPFSAAAIGLSLN 96


>gi|33592624|ref|NP_880268.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|33572270|emb|CAE41822.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
          Length = 230

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+           +F  S VL + L L    L R    +       LYI   +I G 
Sbjct: 7   RMYLTPLAEGTMWMLALFFCSAVLAVALGLLVC-LCRLSKSRVLSRGARLYID--IIRGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   + +++  P L          V   F++  + L+    A++AE+ RSG+ +V
Sbjct: 64  PLLLQL---FYIYYGMPEL--------GVVINAFVAGVLGLTLNFGAYLAELFRSGIQSV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA ALGL      R V+LPQA+R++ P L +  L L+K +SL   +   +L+  
Sbjct: 113 DSGQYEAARALGLNKVDRLRRVVLPQAVRTVFPALGNYALVLIKETSLVAVISVYELMRA 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +   T QA+ +  +   IY ++  ++A    R   ++ +
Sbjct: 173 GEMLAGATFQALTVYTMVGAIYFAMCSVLAHLFRRSEKRLTV 214



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 12/206 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T +  G +    L F   + A  +G LV   RLS +++++   R+Y+++ R  P L+ 
Sbjct: 9   YLTPLAEGTMWMLALFFCSAVLAVALGLLVCLCRLSKSRVLSRGARLYIDIIRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL---SFPTLTMDTNAKIFVFSFVLGIVLS 201
           +F++Y  +  +  + +  +    G+ LN        F +     ++  +  +  LG+   
Sbjct: 69  LFYIYYGMPELGVVINAFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGL--- 125

Query: 202 LFATRLSRHFHEKTGK-ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               RL R    +  +   P L     ++    +LV +   Y+L     +L    F   +
Sbjct: 126 NKVDRLRRVVLPQAVRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALT 185

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVR 286
                  ++  A+     + +A + R
Sbjct: 186 VY-----TMVGAIYFAMCSVLAHLFR 206


>gi|261866998|ref|YP_003254920.1| glutamine-binding periplasmic protein/glutamine transport system
           permease [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261412330|gb|ACX81701.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 240

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 106/249 (42%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP  +                +    T+      F    V+ + +++  T
Sbjct: 1   MTLLNNFLASLPFMNAERANEAISAFWPMLEAAIDKTIPLAIISFFAGLVIALGVAVIRT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                      + L  +Y+S  +I G P LV I + +                       
Sbjct: 61  MPKSSIGLLVLQLLCRIYVS--IIRGTPMLVQIFIIFY-----------GLPEVGIKLDP 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ +E +R+ ++++P+GQ EA+ ++G+ + +     ++PQA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYASETIRAAILSIPKGQWEASYSIGMNYFQTFTRTIMPQALRVSVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++ +K++SLA  V   ++  V   I  +  + I I      IY  + ++++   
Sbjct: 168 PLSNTFISNVKDTSLASLVLVTEMFRVAQNITAENYEFIMIYSEAALIYWCICLVLSFAQ 227

Query: 386 NRLNAKIAL 394
            RL  +++ 
Sbjct: 228 ERLEKRLSR 236


>gi|218672486|ref|ZP_03522155.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli GR56]
          Length = 188

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 83/173 (47%), Positives = 117/173 (67%)

Query: 4   NARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           ++       +S    LYD ++  I  Q++  +LL  +  W  +N   N+ ++N++ G GF
Sbjct: 13  DSAPLPRSGWSFQSALYDPKIRGIFFQVLTIVLLVTLIWWIAHNTAVNLARANIASGFGF 72

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+ RAGFE+ Q ++ Y+SDS+Y  A+LVG +NT  +A +G+I ATIIG ++G GRLS N 
Sbjct: 73  LNSRAGFEVGQSLIAYSSDSTYGRALLVGLLNTILIAVTGIITATIIGFIIGIGRLSRNW 132

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           L+A +C VYVEVFRNIPPL+VIFF Y  VL++LP    S+ LPFG FLNNRGL
Sbjct: 133 LIAKLCTVYVEVFRNIPPLLVIFFWYSGVLAILPNARESLQLPFGSFLNNRGL 185


>gi|33595878|ref|NP_883521.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis 12822]
 gi|33600408|ref|NP_887968.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
 gi|33565957|emb|CAE36507.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33568007|emb|CAE31920.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 230

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+           +F  S VL + L L    L R    +       LYI   +I G 
Sbjct: 7   RMYLTPLAEGTMWTLALFFCSAVLAVALGLLVC-LCRLSKSRVLSRGARLYID--IIRGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   + +++  P L          V   F++  + L+    A++AE+ RSG+ +V
Sbjct: 64  PLLLQL---FYIYYGMPEL--------GVVINAFVAGVLGLTLNFGAYLAELFRSGIQSV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA ALGL      R V+LPQA+R++ P L +  L L+K +SL   +   +L+  
Sbjct: 113 DSGQYEAARALGLNKVDRLRRVVLPQAVRTVFPALGNYALVLIKETSLVAVISVYELMRA 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +   T QA+ +  +   IY ++  ++A    R   ++ +
Sbjct: 173 GEMLAGATFQALTVYTMVGAIYFAMCSVLAHLFRRSEKRLTV 214



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 84/206 (40%), Gaps = 12/206 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T +  G + T  L F   + A  +G LV   RLS +++++   R+Y+++ R  P L+ 
Sbjct: 9   YLTPLAEGTMWTLALFFCSAVLAVALGLLVCLCRLSKSRVLSRGARLYIDIIRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL---SFPTLTMDTNAKIFVFSFVLGIVLS 201
           +F++Y  +  +  + +  +    G+ LN        F +     ++  +  +  LG+   
Sbjct: 69  LFYIYYGMPELGVVINAFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGL--- 125

Query: 202 LFATRLSRHFHEKTGK-ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               RL R    +  +   P L     ++    +LV +   Y+L     +L    F   +
Sbjct: 126 NKVDRLRRVVLPQAVRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQALT 185

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVR 286
                  ++  A+     + +A + R
Sbjct: 186 VY-----TMVGAIYFAMCSVLAHLFR 206


>gi|266624830|ref|ZP_06117765.1| glutamine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288863291|gb|EFC95589.1| glutamine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 230

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 113/234 (48%), Gaps = 16/234 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F+ +    + T  +    KI  F+ ++GIVL  F   + R  +E T K   L  + 
Sbjct: 9   FYFNFIEDNRWKYITDGLQNTLKITFFAVLIGIVLG-FLVAIIRSTYENTHKLKILNAVC 67

Query: 226 TF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           T    +I G P +V + + Y + F             +       +  +A    + A++A
Sbjct: 68  TVYLTVIRGTPVVVQLMIVYFVIFV------------AINPGMVTTAILAFGINSGAYVA 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG+ ++ RGQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S+A 
Sbjct: 116 EIFRSGISSIERGQFEAGRSLGFNYAQTMWYIIMPQAFKNVVPTLANEFIVLLKETSVAG 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G  DL   G  I ++T  A   ++    IYL + ++ +  +  L  +++  E
Sbjct: 176 YIGLQDLTKGGDIIKSRTYSAFMPLIAVALIYLVMVMIFSYLVKLLERRLSRSE 229



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVF 136
           + +    I  G  NT  + F  ++   ++G LV   R         K++  +C VY+ V 
Sbjct: 15  EDNRWKYITDGLQNTLKITFFAVLIGIVLGFLVAIIRSTYENTHKLKILNAVCTVYLTVI 74

Query: 137 RNIPPLVVIFFLYKSVL-SVLPIPDHSIVLPFGM 169
           R  P +V +  +Y  +  ++ P    + +L FG+
Sbjct: 75  RGTPVVVQLMIVYFVIFVAINPGMVTTAILAFGI 108


>gi|187933393|ref|YP_001887465.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum B str. Eklund 17B]
 gi|188589667|ref|YP_001922409.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum E3 str. Alaska E43]
 gi|251778834|ref|ZP_04821754.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|187721546|gb|ACD22767.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum B str. Eklund 17B]
 gi|188499948|gb|ACD53084.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum E3 str. Alaska E43]
 gi|243083149|gb|EES49039.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 219

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 117/234 (50%), Gaps = 17/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        LS   +T+       +F  ++G+ L+L      R    K  + +   
Sbjct: 1   MNFTFLEKYYGYFLSGAEITIVLAFFAVLFGTIMGLGLTLL-----RRSKFKILRIIGTA 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    + G P LV I   Y ++   P L   +        P+  +  IAL+  ++A+++
Sbjct: 56  YVEF--VRGTPLLVQI---YIIYIGLPKLIGIDL-------PDITTGAIALALNSSAYVS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AV +GQMEAA +LG+  + A   +++PQA ++I+P L +++++++K SS+  
Sbjct: 104 EIIRAGIEAVDKGQMEAARSLGMNQKTAMINIIIPQAFKNILPALGNEFISVIKESSMVS 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G A+L+    T+   T   +E +++   +Y  ++  +   +  +  ++ + +
Sbjct: 164 VIGVAELMYNANTVKGNTALGLEPVIVAAIVYFIITFTLTRALGYVERRMKVSD 217



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 35/77 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T    Y    L G   T  LAF  ++  TI+G  +   R S  K++  I   YVE  R 
Sbjct: 3   FTFLEKYYGYFLSGAEITIVLAFFAVLFGTIMGLGLTLLRRSKFKILRIIGTAYVEFVRG 62

Query: 139 IPPLVVIFFLYKSVLSV 155
            P LV I+ +Y  +  +
Sbjct: 63  TPLLVQIYIIYIGLPKL 79


>gi|304398822|ref|ZP_07380692.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304353526|gb|EFM17903.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 222

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   +      L     T+  +     F  +LG +L+L   RLSR +  +      L
Sbjct: 2   QESLQLVLDSAPFLLKGALFTLQLSIGGMFFGLLLGFILALM--RLSRFWPVRW-----L 54

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             I   +  G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 55  ARIYVSIFRGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  + ++ RGQ EAA ++G+T  +  R V+LPQA R+ +PPL + +++L+K++SLA
Sbjct: 104 SESLRGAISSIERGQWEAAASIGMTRWQTLRRVILPQAARTALPPLGNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   +L      I ++T +   + L    IY  ++ +++   NRL   +  ++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNRLEQHVNRQD 218



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G ++   RLS    V W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGALFTLQLSIGGMFFGLLLGFILALMRLSRFWPVRWLARIYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|260462684|ref|ZP_05810890.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259031590|gb|EEW32860.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 314

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +   +  + +    P  +     G   +   +     T+     I V + V+G V+++
Sbjct: 39  LALLLAFVIIRAFASNPAFAWGTAAGYLFHPSIMRGLGNTLMLTVIIMVLAIVVGTVIAI 98

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD-------KPVLGQFN 255
                 R       +A   +Y+  F   G+P L+ +   + L           P LG   
Sbjct: 99  M-----RVSPSPVLRAFAGVYVWFF--RGVPALIQLIFWFNLSLLVREISLTLPFLGTLF 151

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  +     F S  +ALS   A ++AEIVR+G+ +VP GQ EAA ALG+ +R   + + 
Sbjct: 152 AVRTNDFMTPFFSAVVALSLCEAGYMAEIVRAGIKSVPSGQSEAASALGMPYRMILKRIT 211

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR ++PP  ++ +NLLK +SL   +   DL     +I  +T + I ++++  F YL
Sbjct: 212 LPQAMRFVLPPTGNEAINLLKMTSLVTFIAVDDLFYTAQSIYARTFETIPLLIVVAFWYL 271

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
           ++  ++++  + L       + +
Sbjct: 272 AVVSIMSVGQHFLERHFGRSDTR 294



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G  NT  L    M+ A ++GT++   R+S + ++     VYV  FR +P L+ + F 
Sbjct: 71  IMRGLGNTLMLTVIIMVLAIVVGTVIAIMRVSPSPVLRAFAGVYVWFFRGVPALIQLIFW 130

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +   L V  I      L     +       P  +      +    ++  IV +   +  S
Sbjct: 131 FNLSLLVREISLTLPFLGTLFAVRTNDFMTPFFSAVVALSLCEAGYMAEIVRAGIKSVPS 190

Query: 209 RHFHEKTGKALPLLYI 224
                 +   +P   I
Sbjct: 191 GQSEAASALGMPYRMI 206


>gi|302531216|ref|ZP_07283558.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
 gi|302440111|gb|EFL11927.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
          Length = 319

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  ++++F  +  + SV+        +      +NR L+    T+       +   V 
Sbjct: 29  RWIAGVLIVFVAFIVIRSVVTNSALQWPVVGEYLFDNRILNGLRNTLVLTVISMIIGIVG 88

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKP 249
           G++L++      R            +YI  F   G P +  + +   L           P
Sbjct: 89  GVLLAVM-----RLSPNLLMSGAASVYIWLF--RGTPLITQLVIWNFLALAYSKIGLGIP 141

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F     +T+  +F++  + L    AA++AEIVR G+ +V  GQ+EAA ALG++  K
Sbjct: 142 FGPTFISWDTNTLINQFVASLLGLGLNEAAYMAEIVRGGIQSVDSGQLEAASALGMSRGK 201

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++LPQAMR IIPP  ++ +++LK +SL V +G+ +L     TI +Q  + + ++++
Sbjct: 202 TLRRIILPQAMRVIIPPTGNETISMLKTTSLVVVIGYFELFVSAQTIYSQNYKTVPLLIV 261

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++ +    +    A    +
Sbjct: 262 AATWYLFMTSVLTVVQFYIERYFARGTSR 290



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 42/113 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G  NT  L    MI   + G L+   RLS N L++    VY+ +FR  P +  +   
Sbjct: 67  ILNGLRNTLVLTVISMIIGIVGGVLLAVMRLSPNLLMSGAASVYIWLFRGTPLITQLVIW 126

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
               L+   I       P  +  +   L    +       +   +++  IV  
Sbjct: 127 NFLALAYSKIGLGIPFGPTFISWDTNTLINQFVASLLGLGLNEAAYMAEIVRG 179


>gi|82776402|ref|YP_402751.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|309789344|ref|ZP_07683934.1| L-cystine transport system permease protein tcyB [Shigella
           dysenteriae 1617]
 gi|81240550|gb|ABB61260.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|308922738|gb|EFP68255.1| L-cystine transport system permease protein tcyB [Shigella
           dysenteriae 1617]
          Length = 222

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  +LG +L+L      R       + L  
Sbjct: 2   QESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALM-----RLSPIWPVRWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +P L++ +++L+K++SLA
Sbjct: 104 AETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPTLSNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQERE 220



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS    V W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAGYTLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|119025489|ref|YP_909334.1| permease protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154486921|ref|ZP_02028328.1| hypothetical protein BIFADO_00754 [Bifidobacterium adolescentis
           L2-32]
 gi|118765073|dbj|BAF39252.1| permease protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154084784|gb|EDN83829.1| hypothetical protein BIFADO_00754 [Bifidobacterium adolescentis
           L2-32]
          Length = 327

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V  F    V +++  P     + +    N   L     T+       V + +L +
Sbjct: 29  VAAIIVALFAAMLVQALVTNPRFEWNVVWKYLFNENVLEGIKYTLLLTVISMVIAIILAV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   YI  F    + T ++    +      +    P    
Sbjct: 89  ILAVM-----RKSINPVLRGVSWFYIWFFRGTPVYTQLVFWGLFAVLVPRIGVGIPFTSI 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I   +V   F + ++ L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++  
Sbjct: 204 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
             YL ++ ++ +  +RL     
Sbjct: 264 IWYLVITSILMVIQSRLEKHFG 285



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+ A I+  ++   R S N ++  +   Y+  FR  P    + F  
Sbjct: 66  LEGIKYTLLLTVISMVIAIILAVILAVMRKSINPVLRGVSWFYIWFFRGTPVYTQLVFWG 125

Query: 150 KSVLSVLP 157
              + V  
Sbjct: 126 LFAVLVPR 133


>gi|330684943|gb|EGG96623.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 239

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 115/209 (55%), Gaps = 4/209 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + +FVLG++++LF T L R    K  K +  +Y+S  +I G P +V + + +    + 
Sbjct: 34  ITLVTFVLGLIIALF-TALMRISTSKILKGIARVYVS--IIRGTPMIVQLFIIFYGIPEL 90

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L   +     T++P  ++  I LS    A+ +EI+R G+I++P+GQ EAA ++G+ +R
Sbjct: 91  GRLLTNDADNQWTLAP-VIAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMNYR 149

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + ++LPQA+R  IP L + +L L+K++SL   +  A++      + + + + + I L
Sbjct: 150 QTVQRIILPQAIRVSIPALGNTFLGLIKDTSLLGFILVAEMFRKAQEVASTSYEYLTIYL 209

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +Y  +  +I++  +   + I    +
Sbjct: 210 LVALMYWVVCFIISVIQSFYESYIERGYR 238



 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 41/103 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  +     +   II       R+S +K++  I RVYV + R  P +V +F ++  +  +
Sbjct: 31  SIPITLVTFVLGLIIALFTALMRISTSKILKGIARVYVSIIRGTPMIVQLFIIFYGIPEL 90

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
             +  +     + +      +   +L +   A   +   ++ I
Sbjct: 91  GRLLTNDADNQWTLAPVIAAIIGLSLNVGAYASEIIRGGIISI 133


>gi|306823388|ref|ZP_07456763.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Bifidobacterium dentium ATCC 27679]
 gi|309802620|ref|ZP_07696724.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|304553095|gb|EFM41007.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Bifidobacterium dentium ATCC 27679]
 gi|308220684|gb|EFO76992.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 327

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V  F       ++  P     + +    N   L     T+       V + VL +
Sbjct: 29  VAAVIVALFAAMLAQGLITNPRFEWNVVWKYLFNENVLEGIKYTLLLTVISMVIAIVLAV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           VL++      R       + +   YI  F    + T ++    +      +    P    
Sbjct: 89  VLAVM-----RKSINPVLRGVSWFYIWFFRGTPVYTQLVFWGLFAVLIPRIGIGIPFTSI 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  +   +V   F + ++ L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSVDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++  
Sbjct: 204 RIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
             YL ++ ++ +  +RL     
Sbjct: 264 IWYLVITSILMIIQSRLEKHFG 285



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+ A ++  ++   R S N ++  +   Y+  FR  P    + F  
Sbjct: 66  LEGIKYTLLLTVISMVIAIVLAVVLAVMRKSINPVLRGVSWFYIWFFRGTPVYTQLVFWG 125

Query: 150 KSVLSVLP 157
              + +  
Sbjct: 126 LFAVLIPR 133


>gi|121608290|ref|YP_996097.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552930|gb|ABM57079.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 512

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
              G+  +    S   + ++ +   +    V G  L+L      +       + L  LYI
Sbjct: 7   YALGLLWDRDFWSACRVVVELSIATWCMGLVAGFGLAL-----GKQSGSPVLRRLAGLYI 61

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F    LP LVL+   Y L    P         G  +S  F +   AL     AFIAEI
Sbjct: 62  WFF--RSLPLLVLLVFTYNLPQVFPA-------SGVLLSDPFYAGLTALVVSETAFIAEI 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++ VP GQ+EA  ALG+      R++++PQA+R  +P L+++++ + K +SL   +
Sbjct: 113 HRGGILGVPPGQIEAGRALGIGRAGIQRMIVIPQALRIALPALSNEFITIAKMTSLVSVI 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             A+++ VG  +  Q     E +L   F Y+ +  +    +  L A + +  +K
Sbjct: 173 SLAEILLVGQRLYTQNFLVFETMLAVAFYYVLIVTVFDKLLGALEAHMNILRRK 226



 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 29/73 (39%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y     +             L+ +      + G  +  G+ S + ++  +  +Y+  FR
Sbjct: 6   DYALGLLWDRDFWSACRVVVELSIATWCMGLVAGFGLALGKQSGSPVLRRLAGLYIWFFR 65

Query: 138 NIPPLVVIFFLYK 150
           ++P LV++ F Y 
Sbjct: 66  SLPLLVLLVFTYN 78


>gi|311103246|ref|YP_003976099.1| glutamine transport ATP-binding protein GlnQ 1 [Achromobacter
           xylosoxidans A8]
 gi|310757935|gb|ADP13384.1| glutamine transport ATP-binding protein GlnQ 1 [Achromobacter
           xylosoxidans A8]
          Length = 502

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 103/237 (43%), Gaps = 14/237 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                   +  +        + +  +   +V     G +L+L      +         L 
Sbjct: 3   FDWDYAVSLLWDTDFWKACWVVVKLSTATWVIGVAAGFLLAL-----GKQAKNPFVSRLA 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            LYI  F    LP LVL+   Y L    P         G+ +S  F +   AL     AF
Sbjct: 58  GLYIWFF--RSLPLLVLLVFIYNLPQVFPA-------AGALLSDPFYAGLTALVVSETAF 108

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEI R G++ VPRGQ+EA  ALG+ +    R++++PQA+R  +P L+++++ + K +SL
Sbjct: 109 IAEIHRGGILGVPRGQIEAGRALGIRYAGIQRMIVIPQALRIALPALSNEFITIAKLTSL 168

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +  A+++ VG  +  Q     E +L     Y+ +  +    +  L + + +  +
Sbjct: 169 VSVISLAEILLVGQRLYTQNFLVFETMLAVALYYVLIVTLFDKLLGWLESHMNILRR 225



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y     + T           L+ +  +     G L+  G+ + N  V+ +  +Y+  FR
Sbjct: 6   DYAVSLLWDTDFWKACWVVVKLSTATWVIGVAAGFLLALGKQAKNPFVSRLAGLYIWFFR 65

Query: 138 NIPPLVVIFFLYK 150
           ++P LV++ F+Y 
Sbjct: 66  SLPLLVLLVFIYN 78


>gi|293605113|ref|ZP_06687505.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292816516|gb|EFF75605.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 222

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 13/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   + +LG V+ L       +        L  +Y+  F   G P LV + + +  
Sbjct: 21  VTIEVTAGALLLGCVMGLLVGVGRLNPKRYVIYNLCSVYLLFF--RGTPLLVQLFIWF-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P F    + L  Y+ A+++EIVR  + +V RGQ EAA +LG
Sbjct: 77  ---------FGLPQFGVTLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A R+++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++
Sbjct: 128 MSSGQAMRIIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E  L+   IYL L+    L + ++   + 
Sbjct: 188 ETYLVVALIYLVLTTAAMLILRKVEQHLR 216



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-LVAWICRVYVEV 135
           + +    +   +++ G V T  +    ++   ++G LVG GRL+  + ++  +C VY+  
Sbjct: 3   LEFAPVFADFDSLMRGAVVTIEVTAGALLLGCVMGLLVGVGRLNPKRYVIYNLCSVYLLF 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FR  P LV +F  +  +               G+ + 
Sbjct: 63  FRGTPLLVQLFIWFFGLPQFGVTLPAFACGVLGLGMY 99


>gi|213692879|ref|YP_002323465.1| transcriptional regulator, Fis family [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213524340|gb|ACJ53087.1| transcriptional regulator, Fis family [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|320459053|dbj|BAJ69674.1| putative ABC transporter permease component [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 327

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 119/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+      +  ++  P       +    N   L     T++      V + +L +
Sbjct: 29  VAAVIVVLLAAMLIQGLITNPRLDWPTVWKYLFNENVLEGIRYTLELTVISMVVAIILSV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 89  ILAIM-----RKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGLFAVLIPKISLGIPFTSV 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++L+  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLLVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
           F YL ++ ++ +  +RL A   
Sbjct: 264 FWYLLITSILMVVQSRLEAHFG 285



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+ A+++ ++    +  +  N  + +      +L                        +L
Sbjct: 28  IVAAVIVVLLAAMLIQGLITN-PRLDWPTVWKYLFNEN--------------------VL 66

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F   
Sbjct: 67  EGIRYTLELTVISMVVAIILSVILAIMRKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGL 126

Query: 151 SVLSVLP 157
             + +  
Sbjct: 127 FAVLIPK 133


>gi|182418113|ref|ZP_02949413.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum 5521]
 gi|237666123|ref|ZP_04526110.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377931|gb|EDT75471.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum 5521]
 gi|237658213|gb|EEP55766.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 219

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 112/222 (50%), Gaps = 13/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +     +    +  F+ + G +L L  T L R    K    +   Y+    + G P 
Sbjct: 9   YFGYFVKGAEITIVLAFFAVLFGTILGLGIT-LIRRSKFKAISFIGTAYVEF--MRGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   Y ++   P L   +        P+  +  IALS  ++A+++EI+R+G+ AV +
Sbjct: 66  LVQI---YIIYIGLPKLIGIDL-------PDMATGIIALSLNSSAYVSEIIRAGIEAVDK 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LG+  ++A   V++PQA ++I+P L +++++++K SS+   +G A+L+   G
Sbjct: 116 GQMEAARSLGMNQKQAMFEVVIPQAFKNILPALGNEFISVIKESSMVSVIGVAELMYNAG 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   T   +E +++   IY  ++  +   +  +  ++   +
Sbjct: 176 IVRGNTALGLEPVVVAAIIYFIITFTLTRVLGYVERRMKASD 217



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 36/77 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T    Y    + G   T  LAF  ++  TI+G  +   R S  K +++I   YVE  R 
Sbjct: 3   FTFLEKYFGYFVKGAEITIVLAFFAVLFGTILGLGITLIRRSKFKAISFIGTAYVEFMRG 62

Query: 139 IPPLVVIFFLYKSVLSV 155
            P LV I+ +Y  +  +
Sbjct: 63  TPLLVQIYIIYIGLPKL 79


>gi|313892004|ref|ZP_07825605.1| glutamine ABC transporter, permease protein GlnP [Dialister
           microaerophilus UPII 345-E]
 gi|329121000|ref|ZP_08249631.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
 gi|313119647|gb|EFR42838.1| glutamine ABC transporter, permease protein GlnP [Dialister
           microaerophilus UPII 345-E]
 gi|327471162|gb|EGF16616.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
          Length = 213

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 12/180 (6%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +  + +  +Y     I G P LV I L Y   F  P++              F++   
Sbjct: 45  QIRVLRIIATIYAD--CIRGTPLLVQIFLIY---FALPMISG-------HRVDPFLAAVT 92

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A    + A+++EI+R+G+ ++  GQMEA  +LGLT  +    ++LPQA+R+I+PPL +++
Sbjct: 93  ACGINSGAYVSEIIRAGIQSIDIGQMEAGRSLGLTWWQTMYHIILPQALRNILPPLGNEF 152

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +LK+SSL   +GF +L   G  II QT  + EI L   F+YL +++ I+  ++ L  +
Sbjct: 153 IAMLKDSSLVSVIGFEELTRRGQLIIAQTYGSFEIWLTVAFLYLVMTLAISRLVSFLERR 212


>gi|241763925|ref|ZP_04761968.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241366820|gb|EER61252.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 222

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 13/221 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
             GL           +I   S +LG V+ L       +   +   AL   Y++   I G 
Sbjct: 9   WAGLPQLLAGAVVTVEITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAA--IRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + +           F       + P F+   I L  Y+ A+++E+VR  + ++
Sbjct: 67  PLLVQLFILF-----------FGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA ++G++   A R V+LPQA+  +IPPL ++++ L+KNS+L   +   DL+  
Sbjct: 116 DKGQMEAARSIGMSSGLAMRTVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHE 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  II+ + +++E+ L    +Y  L+ + +L + R+  ++ 
Sbjct: 176 GQKIISVSYRSLEVYLAIAVVYFILTGVTSLVLRRMELRLR 216



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEV 135
           + ++   +    +L G V T  +  + ++   ++G LVG GRL+   ++V  +C  YV  
Sbjct: 3   LDFSPVWAGLPQLLAGAVVTVEITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAA 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157
            R  P LV +F L+  +     
Sbjct: 63  IRGTPLLVQLFILFFGLPQFGI 84


>gi|227823794|ref|YP_002827767.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227342796|gb|ACP27014.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 245

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SFVLG+ L L  T L R F      A+   Y+  ++I G P LV + 
Sbjct: 36  WAGLIFTVPLTLLSFVLGLSLGLV-TALVRLFAPAPFVAVARFYV--WVIRGTPLLVQLF 92

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                 + +   F +  I  +    A+ +EI+R+ + +VPRGQ EA
Sbjct: 93  VIFY-----------GLPSMNILLDAFPAALIGFTLNIGAYTSEIIRATISSVPRGQWEA 141

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++  +  R  +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 142 AYSIGMSWSQVMRRTILPQATRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVAT 201

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL++S +++    RL  + A  
Sbjct: 202 TYEPLILYIEAALIYLAMSSVLSALQVRLEKRFARY 237



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L     +    +G +    RL A      + R YV V R  P LV +F +
Sbjct: 35  LWAGLIFTVPLTLLSFVLGLSLGLVTALVRLFAPAPFVAVARFYVWVIRGTPLLVQLFVI 94

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 95  FYGLPSMNILLDAFPAALIGFTLN 118


>gi|282856549|ref|ZP_06265823.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
 gi|282585615|gb|EFB90909.1| gln/Arg/Lys/His-binding protein and permease protein
           [Pyramidobacter piscolens W5455]
          Length = 519

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 14/226 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L           ++ + S  L + + LF   + R F     +A    Y     I G
Sbjct: 293 YVGFLPSFGRAAVVTLEVSIASMALALAVGLFI-AVCRLFGPLPLRAFATGYTEF--IRG 349

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P ++ +   +                       F++  +AL    AA+ +E  R+GL A
Sbjct: 350 TPVMIQLFFIFY-----------GLPNVGVQLSPFVAGTLALGLNYAAYESENYRAGLEA 398

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPR QME A+ALG+T R+A R V+LPQA+R  + P+T+ ++ LLK+SSL   +   DL  
Sbjct: 399 VPRAQMEGALALGMTKREALRHVILPQAIRVSLLPMTNDFIALLKDSSLVSIITLVDLTR 458

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G +            I   IYL +         +L  K+ +  +
Sbjct: 459 TYGQLATVNYDYFGTGFIVAVIYLLIGTPFVRIARKLEKKLNVSLR 504



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 4/104 (3%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+  A +V    T  ++ + M  A  +G  +   RL     +      Y E  R  P ++
Sbjct: 299 SFGRAAVV----TLEVSIASMALALAVGLFIAVCRLFGPLPLRAFATGYTEFIRGTPVMI 354

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +FF++  + +V       +     + LN              A
Sbjct: 355 QLFFIFYGLPNVGVQLSPFVAGTLALGLNYAAYESENYRAGLEA 398


>gi|241895475|ref|ZP_04782771.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Weissella paramesenteroides ATCC 33313]
 gi|241871449|gb|EER75200.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Weissella paramesenteroides ATCC 33313]
          Length = 235

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 10/209 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFH----EKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             + + SF LG++L+L  T L R        K  K +   Y+  F     P LV + + Y
Sbjct: 21  VPLSLISFALGLILALI-TALVRISQKGKEFKIIKGIFNFYVWLF--RSTPLLVQLFIVY 77

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P L     +        F++  I  S  T A+ +E +R+ + +VP+GQ EAA +
Sbjct: 78  ---FGLPYLVIPGILDEGIKLTPFVAGVITFSLNTGAYASETIRAAITSVPQGQWEAASS 134

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+T  +  R ++LPQA+   +PPL + +++L+K++SLA  +   ++  V   I  +  Q
Sbjct: 135 IGMTRSQTLRRIILPQAIYLSVPPLANSFISLVKDTSLAATITIVEMFEVSQQIAAENYQ 194

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            + +  +   IY     ++ +  + L   
Sbjct: 195 PLIMYSLVALIYAVFCSLLTIGQHYLEKH 223


>gi|300173760|ref|YP_003772926.1| glutamine-binding protein/glutamine transport system permease
           [Leuconostoc gasicomitatum LMG 18811]
 gi|299888139|emb|CBL92107.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 482

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 17/217 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     TM       + + V GI+L +              ++L    I  F       
Sbjct: 280 FLKGLWQTMLLTVLAIILASVWGILLGIMG-----VSQNSILRSLSTTIIYIFR-----G 329

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+ L + ++   P +            P F +  + L     A+ A  VR G  AV R
Sbjct: 330 LPLMVLAFFIYIGLPSVIGMKI-------PAFTAGLLTLVLNEGAYTAAFVRGGFAAVDR 382

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA+ +LGL++ K+ R V++PQ ++ +IP   +Q++  LK++S+  A+G  +L   G 
Sbjct: 383 GQMEASRSLGLSYAKSMRKVVVPQGLKIMIPSFINQFIITLKDTSILSAIGILELTQTGS 442

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I+++  Q   +  I   IYL +  ++    N +  +
Sbjct: 443 LIVSRNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKR 479



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 38/71 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  L    +I A++ G L+G   +S N ++  +    + +FR +P +V+ FF
Sbjct: 279 AFLKGLWQTMLLTVLAIILASVWGILLGIMGVSQNSILRSLSTTIIYIFRGLPLMVLAFF 338

Query: 148 LYKSVLSVLPI 158
           +Y  + SV+ +
Sbjct: 339 IYIGLPSVIGM 349


>gi|91225414|ref|ZP_01260536.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269966668|ref|ZP_06180747.1| polar amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 40B]
 gi|91189777|gb|EAS76050.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269828735|gb|EEZ82990.1| polar amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 40B]
          Length = 265

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 19/250 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+      G +     +    +T++ +A    F+ VLG+V +L      
Sbjct: 34  MGYQWQWERVPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL----- 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K G  +   Y+   +I   P LV I L Y +             G       F +
Sbjct: 89  RLSDSKVGNVIGTTYVE--VIRNTPLLVQIYLLYFVF------------GPVIGLDRFST 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AEI R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT
Sbjct: 135 AVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL +    I+++T    EI      IYL+L++ ++     L
Sbjct: 195 NEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWL 254

Query: 389 NAKIALKEKK 398
             K+    +K
Sbjct: 255 EHKLGASWRK 264



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 1/97 (1%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVG 115
           L  G   +  +  +E     + +  D  +  A ++ G + T  ++   +    ++G +  
Sbjct: 27  LDSGADAMGYQWQWERVPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTA 86

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             RLS +K+   I   YVEV RN P LV I+ LY   
Sbjct: 87  LLRLSDSKVGNVIGTTYVEVIRNTPLLVQIYLLYFVF 123


>gi|260583445|ref|ZP_05851193.1| glutamine ABC transporter glutamine-binding protein/permease
           [Granulicatella elegans ATCC 700633]
 gi|260158071|gb|EEW93139.1| glutamine ABC transporter glutamine-binding protein/permease
           [Granulicatella elegans ATCC 700633]
          Length = 479

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 17/216 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+    T+         + ++G++L L           +T +   L  I+T  I  +  +
Sbjct: 280 LNGLWNTIWITFVSLAIATIIGVLLGLM----------RTSRISVLETIATIYIDFMRGI 329

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            LI L + ++F  P          +      ++    L    AA+IAEIVR G+ A+ +G
Sbjct: 330 PLIVLTFFIYFGIPQ-------ALNIRLDATVAAITTLGLNAAAYIAEIVRGGINAIDKG 382

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA++LGL + K+ + ++LPQA+R ++P   +Q++  LK++S+   +G  +L   G  
Sbjct: 383 QSEAAMSLGLPYYKSMQKIILPQAIRLMVPSFINQFVITLKDTSILSIIGLVELTQTGKI 442

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           II +  Q+  +  I   +YL +  ++     RL  K
Sbjct: 443 IIARNLQSSSMWFIVGMMYLIVITLLTKISARLERK 478



 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 39/72 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           + A  +L G  NT W+ F  +  ATIIG L+G  R S   ++  I  +Y++  R IP +V
Sbjct: 274 TNAPTLLNGLWNTIWITFVSLAIATIIGVLLGLMRTSRISVLETIATIYIDFMRGIPLIV 333

Query: 144 VIFFLYKSVLSV 155
           + FF+Y  +   
Sbjct: 334 LTFFIYFGIPQA 345


>gi|310819142|ref|YP_003951500.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392214|gb|ADO69673.1| Glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 469

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 14/229 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F MF     L      +    ++ + +  LGI   +    L+R       + L + YI+ 
Sbjct: 253 FWMFSREVALPRVLQGLGVTLQLTLGAGGLGIAWGMLV-ALARISRRTGLRGLAVAYITL 311

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F                L      +     I          +  IALS   AA+IAEI R
Sbjct: 312 FR------------GTPLLLQLLFIFFALPIVAGIRMGPMAAGVIALSLNAAAYIAEIFR 359

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           + + ++ +GQMEAA ALG++H  A R V+LPQ  R +IPPL ++   L K++SL + +  
Sbjct: 360 AAIESIDKGQMEAARALGMSHELAMRRVILPQTFRRLIPPLVNELAALSKDTSLVMVIAL 419

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +++     +     +  E+       YL +   ++    RL  ++  +
Sbjct: 420 PEMLYETKQLAGTYLRP-EVYAWAAIGYLLIVAALSALAQRLERRLEAR 467



 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 18/51 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           L G   T  L           G LV   R+S    +  +   Y+ +FR  P
Sbjct: 266 LQGLGVTLQLTLGAGGLGIAWGMLVALARISRRTGLRGLAVAYITLFRGTP 316


>gi|163792483|ref|ZP_02186460.1| hypothetical protein BAL199_16588 [alpha proteobacterium BAL199]
 gi|159182188|gb|EDP66697.1| hypothetical protein BAL199_16588 [alpha proteobacterium BAL199]
          Length = 254

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 13/214 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+   S  +G  L++    L R    +  +A    Y+  F   G P LV I L Y 
Sbjct: 29  PMTLKLAGLSLFIGFFLAVVLAVL-RTSGIRPLEAFVRSYVYVF--RGTPLLVQIFLIYY 85

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                   GQF+FI  S + P     +    IAL+  T A+ +EI+R G+ +VP GQ+EA
Sbjct: 86  GT------GQFDFIKESFLWPVLREAYWCAIIALTLNTGAYTSEIIRGGIESVPWGQVEA 139

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A G+      R V+ PQA+R  +P   ++ + ++K++SLA  V   ++  +   I++Q
Sbjct: 140 AKACGMNVWLRFRRVVFPQAIRQALPGYGNEIILMVKSTSLASTVTLLEITGIARKIVSQ 199

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T   +E+ ++   IYL++  +I   ++ L  +++
Sbjct: 200 TYAPLELFIMAGAIYLTIVFVITRAVDMLENRLS 233



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 32/81 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A+L G   T  LA   +     +  ++   R S  + +    R YV VFR  P LV 
Sbjct: 20  YFPALLAGIPMTLKLAGLSLFIGFFLAVVLAVLRTSGIRPLEAFVRSYVYVFRGTPLLVQ 79

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           IF +Y        I +  +  
Sbjct: 80  IFLIYYGTGQFDFIKESFLWP 100


>gi|325841208|ref|ZP_08167333.1| putative arginine ABC transporter, permease protein ArtQ
           [Turicibacter sp. HGF1]
 gi|325490065|gb|EGC92411.1| putative arginine ABC transporter, permease protein ArtQ
           [Turicibacter sp. HGF1]
          Length = 233

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 115/235 (48%), Gaps = 6/235 (2%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +    +   F +      L    +T+        F  ++GI++SL     ++    K   
Sbjct: 1   MQVRKMSFEFLVDYYPMLLKGTGVTIALALITVFFGTLIGILVSLTKFN-AKGMLGKVLS 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            L   Y++ F   G P ++ + +   L F  P L    +     +S EF+   IAL+  +
Sbjct: 60  KLADAYVAFF--RGTPLMIQLFI---LWFGVPQLLHTRYPSFGWISAEFLVGAIALAINS 114

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+++EI R+G+ AV +GQ EA  +LGL+ ++  + V+LPQA+++I+P L ++++ ++K 
Sbjct: 115 GAYVSEIFRAGIQAVDKGQFEAGRSLGLSEKQTLKHVILPQAVKNILPALGNEFVVIIKE 174

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S++   +G  DL+     I   T  A  + ++   IY  L+   +  ++ L  ++
Sbjct: 175 SAIVSVIGLRDLMYNSDMIQAATFNAFGVYVVAAVIYFILTASCSKLLSVLEGRL 229



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----KLVAWICRVYVEVFRNIP 140
           Y   +L G   T  LA   +   T+IG LV   + +A     K+++ +   YV  FR  P
Sbjct: 14  YYPMLLKGTGVTIALALITVFFGTLIGILVSLTKFNAKGMLGKVLSKLADAYVAFFRGTP 73

Query: 141 PLVVIFFLYKSVLSVLP 157
            ++ +F L+  V  +L 
Sbjct: 74  LMIQLFILWFGVPQLLH 90


>gi|297162527|gb|ADI12239.1| ABC transporter, permease [Streptomyces bingchenggensis BCW-1]
          Length = 275

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 119/259 (45%), Gaps = 14/259 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V++     +V ++L  P          F   R +    +++   A   + S  LG V++L
Sbjct: 5   VILLLAAMAVSTILTNPRFEWGTVGKYFFEIRIIKGIGVSLGMTAVTMLLSLALGTVVAL 64

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKPVLGQFN 255
                SR         +       ++   +P LV +   Y L           P   +F 
Sbjct: 65  MRMGSSRLMATVAAAFI-------WVFRSIPMLVQLLFWYNLAALFPTLSLGIPWGPRFV 117

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               +++     +  I L+ +  A+IAE++RSGL+AVP GQ +AA  LGLT  +    + 
Sbjct: 118 TFDSNSLLGPLTAAVIGLTLHETAYIAELIRSGLLAVPDGQRQAAATLGLTPGQTFFRIT 177

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R I+PPL ++ ++LLK +SL   +  ADL+     I  +  Q + ++++    Y+
Sbjct: 178 LPQALRVIVPPLGNELISLLKATSLVSVISLADLLYSVQLIYAKNFQTVPLLIVAAIWYM 237

Query: 376 SLSIMIALFMNRLNAKIAL 394
            ++ +I L   RL  +++ 
Sbjct: 238 IITGLITLLQQRLERRLSR 256



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 35/62 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   +  +    M+ +  +GT+V   R+ +++L+A +   ++ VFR+IP LV + F 
Sbjct: 37  IIKGIGVSLGMTAVTMLLSLALGTVVALMRMGSSRLMATVAAAFIWVFRSIPMLVQLLFW 96

Query: 149 YK 150
           Y 
Sbjct: 97  YN 98


>gi|282857320|ref|ZP_06266557.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyramidobacter piscolens W5455]
 gi|282584820|gb|EFB90151.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyramidobacter piscolens W5455]
          Length = 277

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 17/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                 +    +++      +   + G VL+L      +             Y S F   
Sbjct: 67  YYKVFYNGMINSLEVTFMSVIMGSICGTVLALL-----KVSRLGPLSWFATAYTSVF--R 119

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V + L Y   F  P L  +         P F ++ +     +AA+++EI+R G+ 
Sbjct: 120 GTPLMVQLFLVY---FATPQLFDYQI-------PAFNAVVLTFGLNSAAYVSEILRGGIQ 169

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQ EAA+ALG+ +R     +++PQA+R+++P L ++ + LLK++S+   +G  D++
Sbjct: 170 SIDVGQREAAMALGVPYRAMMFDIVIPQALRTVLPSLVNELIALLKDTSIVATIGMLDMM 229

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               T +N T  A E  ++   +Y  L ++     +RL  ++   ++
Sbjct: 230 RAAQTAMNSTYLAFEPFIVVAGMYYVLVMIFTAVASRLERRLHKSDR 276



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 36/80 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     Y      G +N+  + F  +I  +I GT++   ++S    ++W    Y  VF
Sbjct: 59  LHFERIWPYYKVFYNGMINSLEVTFMSVIMGSICGTVLALLKVSRLGPLSWFATAYTSVF 118

Query: 137 RNIPPLVVIFFLYKSVLSVL 156
           R  P +V +F +Y +   + 
Sbjct: 119 RGTPLMVQLFLVYFATPQLF 138


>gi|134102290|ref|YP_001107951.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914913|emb|CAM05026.1| ABC transporter, nucleotide binding/ATPase protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 780

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 14/221 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 FG+F N    +   +        +  + VLG+ L+L      +    +      
Sbjct: 277 FDWAYTFGLFGNAELWNAALMVAVLAVLAWSIATVLGMGLALL-----KRSELRVLSVPA 331

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             Y+  F    LP LVL+   Y L    P L          +   F+   +AL     A+
Sbjct: 332 SGYVWFF--RSLPLLVLLIFIYNLPQVIPELR-------PVLGSPFVVGLVALVLSETAY 382

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEI R GL +V  GQ EAA ALG+ +    RLV++PQA R  +P L +Q++ +LK +SL
Sbjct: 383 IAEIHRGGLKSVSVGQGEAARALGIPYGGVQRLVVIPQAFRVALPALGNQFITILKLTSL 442

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             ++  A+++ VG  +  Q  + +E +L     Y+ L  + 
Sbjct: 443 VSSISLAEILLVGQRLYTQNFKVLETLLAVSIFYVVLVTLF 483



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
            +  GF+       + +   +  A++V  +     A      AT++G  +   + S  ++
Sbjct: 272 DDDFGFDWAYTFGLFGNAELWNAALMVAVL-----AVLAWSIATVLGMGLALLKRSELRV 326

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYK 150
           ++     YV  FR++P LV++ F+Y 
Sbjct: 327 LSVPASGYVWFFRSLPLLVLLIFIYN 352


>gi|296449544|ref|ZP_06891321.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296878133|ref|ZP_06902148.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296261608|gb|EFH08426.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296430886|gb|EFH16718.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 230

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 106/189 (56%), Gaps = 6/189 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           +++    K  +A+  +YI   ++ G P LV I   Y + F  P L    F     +  EF
Sbjct: 47  MAKISKSKVLRAISSIYIE--VLRGTPLLVQI---YIVWFGLPQL-GIRFPMLFGIPSEF 100

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++   ALS  + A++AEI+RSG+ +V  GQMEA+ +LGL +    R +++PQA+++I+P 
Sbjct: 101 IASAFALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPS 160

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ L+K SS+   +G  +++     + N   +A+E +++   IY  ++  ++  + 
Sbjct: 161 LANEFITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVG 220

Query: 387 RLNAKIALK 395
            L  K+++ 
Sbjct: 221 LLEKKLSVS 229



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 41/84 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  S + T+ L G   T  ++   +    IIG ++   ++S +K++  I  +Y+EV 
Sbjct: 8   LDFSFLSRFGTSFLEGTGVTVSISLVALCFGFIIGIIICMAKISKSKVLRAISSIYIEVL 67

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R  P LV I+ ++  +  +     
Sbjct: 68  RGTPLLVQIYIVWFGLPQLGIRFP 91


>gi|133723150|gb|ABO37821.1| GlnP [Lactococcus garvieae]
          Length = 237

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 115/220 (52%), Gaps = 23/220 (10%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
            +T+      FV + ++G++  LF      A R     +    +++PLL ++ F+ +G+P
Sbjct: 35  WITIQLALVSFVLAMIVGVIFGLFSASPSPALRTISRIYVDLNRSIPLLVLTIFIFYGIP 94

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ +   +Q   +                 EF +  IAL+   +A+IAEIVR G+ AVP
Sbjct: 95  NMLQLITGHQSPLN-----------------EFTAGVIALTLNESAYIAEIVRGGIAAVP 137

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQMEA+ +LG+ + K  R V+LPQA++  IP L +Q++  LK+++L   +G  +L+  G
Sbjct: 138 TGQMEASRSLGIPYVKTMRKVILPQAVKITIPSLINQFIITLKDTTLVSVIGLVELLQAG 197

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I+ +  QA  +  +   IY+ + +++     R+  K+ 
Sbjct: 198 QIIVARNFQAFRVYGLIGLIYMVVLLLLMWAGRRIEQKMK 237



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 37/80 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T  LA    + A I+G + G    S +  +  I R+YV++ R+IP LV+ 
Sbjct: 27  WNQLGKGLWITIQLALVSFVLAMIVGVIFGLFSASPSPALRTISRIYVDLNRSIPLLVLT 86

Query: 146 FFLYKSVLSVLPIPDHSIVL 165
            F++  + ++L +       
Sbjct: 87  IFIFYGIPNMLQLITGHQSP 106


>gi|294497334|ref|YP_003561034.1| L-cystine import ABC transporter permease TcyB [Bacillus megaterium
           QM B1551]
 gi|294347271|gb|ADE67600.1| L-cystine import ABC transporter, permease protein TcyB [Bacillus
           megaterium QM B1551]
          Length = 234

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 114/245 (46%), Gaps = 14/245 (5%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
             L     PD   +        +  L      +  +  + + +FVLGI+L++  T L+R 
Sbjct: 1   MFLLNNIFPDGERLNQLISIAQSSLLPMLKGAIQYSIPLTLITFVLGIILAVL-TALARL 59

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K    +  +Y+S  +I G P LV + + +                       F+S  
Sbjct: 60  SSIKVLNIIARIYVS--IIRGTPLLVQLFIIFY-----------GLPNLDITIDPFISAI 106

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S    A+ +EI+R+ + ++P+GQ EA  +LG+T+ +A R ++LPQA R  IPPL++ 
Sbjct: 107 IGFSLSVGAYASEIIRAAIQSIPKGQWEAGYSLGMTYSQALRRIILPQAARVSIPPLSNS 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K++SLA  +  +++      I +   + + +      +Y  +  ++++   R+  
Sbjct: 167 FISLIKDTSLASLILVSEMFRKAQEIASTNYEFLLLYSEAALLYWIMCTILSIIQGRIEI 226

Query: 391 KIALK 395
           ++   
Sbjct: 227 RLDRY 231



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +  L     +   I+  L    RLS+ K++  I R+YV + R  P LV +F ++  + ++
Sbjct: 36  SIPLTLITFVLGIILAVLTALARLSSIKVLNIIARIYVSIIRGTPLLVQLFIIFYGLPNL 95

Query: 156 LPIPDHSIVLPFGMFLN 172
               D  I    G  L+
Sbjct: 96  DITIDPFISAIIGFSLS 112


>gi|253991464|ref|YP_003042820.1| amino acid ABC transporter extracellular solute-binding protein
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782914|emb|CAQ86079.1| similar to extracellular solute-binding protein-amino acid abc
           transporter [Photorhabdus asymbiotica]
          Length = 233

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 14/221 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         + + +F LGI+L  F   L R +  K   A+   Y+  +LI G P 
Sbjct: 13  FWPMLYAGFTFTIPLTLITFTLGIILG-FIVALIRLYGPKPFVAVAKFYV--WLIRGTPL 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +                       F S  I  +    A+ +E++R+ L++VP+
Sbjct: 70  LVQLFLIFY-----------ALPSVGITLGAFTSAVIGFTLNIGAYTSEVIRATLLSVPK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G++  ++ R ++LPQA R  IPPL++ +++L+K++SLA  +   +L     
Sbjct: 119 GQWEAAYSIGMSWTQSLRRIILPQAARIAIPPLSNTFISLVKDTSLASVITVPELFLAAQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            I   T Q + +      IYL +S +++    RL  K + K
Sbjct: 179 RIAAVTYQPLILYTEAAIIYLIISSVLSSLQARLEKKFSQK 219



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  GF  T  L         I+G +V   RL   K    + + YV + R  P L
Sbjct: 11  DSFWPMLYAGFTFTIPLTLITFTLGIILGFIVALIRLYGPKPFVAVAKFYVWLIRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++ ++ SV            G  LN
Sbjct: 71  VQLFLIFYALPSVGITLGAFTSAVIGFTLN 100


>gi|156933487|ref|YP_001437403.1| hypothetical protein ESA_01305 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531741|gb|ABU76567.1| hypothetical protein ESA_01305 [Cronobacter sakazakii ATCC BAA-894]
          Length = 222

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F  VLG +L++      R         L  
Sbjct: 2   QESIQLVIDSAPFLLKGAVFTLQLSIGGMFFGLVLGFLLAMM-----RLSPFWPVSWLAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL + +++L+K++SLA
Sbjct: 104 SETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLGNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L      I ++T +   + L    IY  ++ +++   N    ++  +E+
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNHFENQLNRQER 219



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+  GM    ++G L+   RLS    V+W+ R Y+ +FR  P +  +F +
Sbjct: 15  LLKGAVFTLQLSIGGMFFGLVLGFLLAMMRLSPFWPVSWLARFYISIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPAAMIGLSLN 98


>gi|303246939|ref|ZP_07333215.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491646|gb|EFL51529.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 292

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 118/255 (46%), Gaps = 8/255 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++  L   +++   +      +    F +   L     T+   A   +    LG++ ++
Sbjct: 20  ILLIGLMGLIVNAFIVGQIDWSVVEEFFFSTALLKGLANTILITACSMLMGMALGVIFAI 79

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGST 261
                 R       +     YI  F   G P  + + + + L    PV+   F       
Sbjct: 80  M-----RLSQNPVSRMFSGWYIWLF--RGAPVYLQLLIWFNLALIFPVVNLGFAQYRMVD 132

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   FM+  + L     A++ EIVR G+++V +GQ++AA +LG+T   A R ++LPQAMR
Sbjct: 133 VMTPFMAALLGLGLNEGAYLTEIVRGGILSVDKGQIDAATSLGMTRLMAMRRIVLPQAMR 192

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP+ ++++ LLK SS+A A+ + +L+     I     + +E++++    YL +  ++
Sbjct: 193 VIVPPIGNEFIGLLKTSSMASAIAYTELLHKAQIIYFVNAKVMELLIVATGWYLIVVTIL 252

Query: 382 ALFMNRLNAKIALKE 396
           ++    +  + A   
Sbjct: 253 SVVQVGIERRFARGH 267



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++TA+L G  NT  +    M+    +G +    RLS N +       Y+ +FR  P  + 
Sbjct: 48  FSTALLKGLANTILITACSMLMGMALGVIFAIMRLSQNPVSRMFSGWYIWLFRGAPVYLQ 107

Query: 145 IFFLYKSVL 153
           +   +   L
Sbjct: 108 LLIWFNLAL 116


>gi|115375368|ref|ZP_01462631.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367652|gb|EAU66624.1| glutamine ABC transporter substrate-binding protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 435

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 96/229 (41%), Gaps = 14/229 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F MF     L      +    ++ + +  LGI   +    L+R       + L + YI+ 
Sbjct: 219 FWMFSREVALPRVLQGLGVTLQLTLGAGGLGIAWGMLV-ALARISRRTGLRGLAVAYITL 277

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F                L      +     I          +  IALS   AA+IAEI R
Sbjct: 278 FR------------GTPLLLQLLFIFFALPIVAGIRMGPMAAGVIALSLNAAAYIAEIFR 325

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           + + ++ +GQMEAA ALG++H  A R V+LPQ  R +IPPL ++   L K++SL + +  
Sbjct: 326 AAIESIDKGQMEAARALGMSHELAMRRVILPQTFRRLIPPLVNELAALSKDTSLVMVIAL 385

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +++     +     +  E+       YL +   ++    RL  ++  +
Sbjct: 386 PEMLYETKQLAGTYLRP-EVYAWAAIGYLLIVAALSALAQRLERRLEAR 433



 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 18/51 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           L G   T  L           G LV   R+S    +  +   Y+ +FR  P
Sbjct: 232 LQGLGVTLQLTLGAGGLGIAWGMLVALARISRRTGLRGLAVAYITLFRGTP 282


>gi|152988501|ref|YP_001351133.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150963659|gb|ABR85684.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 320

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   + + S  +G+ + L A  L R     T   L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWLSLVSGAIGLAIGLVAG-LCRLSKNPTLHDLSTIYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEI+R+G+ ++ RGQ EAA
Sbjct: 177 FY------------FFIGTVLDLSREFAGVAALALFTGAYVAEIIRAGVQSIARGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNASQSMRHVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL L++ ++   +RL  ++   +
Sbjct: 285 FSTFEIWFCVAALYLLLNLPLSHMASRLERRLGQSD 320



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T WL+         IG + G  RLS N  +  +  +YVE+ R  P LV IF  
Sbjct: 118 LLWGLWTTLWLSLVSGAIGLAIGLVAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIF 177

Query: 149 YKSV 152
           Y  +
Sbjct: 178 YFFI 181


>gi|259651118|dbj|BAI43280.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 498

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               ++    TM        F+  +GI++ L           +  + +   +I  F   G
Sbjct: 293 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLG-----VLPNRFARGVATTFIYIF--RG 345

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         +  P F++  I L+    A+ A  V+ G+ A
Sbjct: 346 LPLLVLALFIYT---GVPSLIG-------SKIPAFVAGIITLTLNEGAYTAAFVKGGIQA 395

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 396 VDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQ 455

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  +  +I  +   IYL +  ++    N +  ++
Sbjct: 456 TGKIIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQQRM 496



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +    +  AT +G LVG   +  N+    +   ++ +FR +P LV+ 
Sbjct: 293 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLGVLPNRFARGVATTFIYIFRGLPLLVLA 352

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 353 LFIYTGVPSL 362


>gi|329943910|ref|ZP_08292179.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328531343|gb|EGF58185.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 321

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 8/254 (3%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
                  + +  +  +       ++   R +        T    F  +  +GIVL++  T
Sbjct: 31  IVTVLGAMLIHGLVTNEKFHWSTVWFFLREIHVVKAVGWTLLLTF-MAMAIGIVLAV-TT 88

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNFIGGS 260
            + R       + + L Y+  F    + T ++      AL  QL    P   +      +
Sbjct: 89  AILRQSSNPVLRWVALAYLWFFRGTPIYTQLVFWGALSALYQQLSLGIPFGPELLTFKTT 148

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           TV   F++  + L     A+++EIVRSGL +V +GQ EAA ALG++  +  R ++LPQAM
Sbjct: 149 TVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEAAGALGMSKGQILRRIVLPQAM 208

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           R I+PP  ++ +++LK +SL +AV F  DL  V  +  + T Q I ++++    Y+ ++ 
Sbjct: 209 RVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNSYASLTYQIIPLLIVAAIWYIIITS 268

Query: 380 MIALFMNRLNAKIA 393
           ++ +  + +     
Sbjct: 269 ILMVGQHYIERYYG 282



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 7/107 (6%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +     T  L F  M    ++       R S+N ++ W+   Y+  FR  P    + F  
Sbjct: 64  VKAVGWTLLLTFMAMAIGIVLAVTTAILRQSSNPVLRWVALAYLWFFRGTPIYTQLVFWG 123

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                          L  G+      L+F T T+ T     V    +
Sbjct: 124 ALSALYQQ-------LSLGIPFGPELLTFKTTTVFTPFVAAVLGLGI 163


>gi|315446796|ref|YP_004079675.1| amino acid ABC transporter substrate-binding protein, PAAT family
           ;amino acid ABC transporter membrane protein, PAAT
           family [Mycobacterium sp. Spyr1]
 gi|315265099|gb|ADU01841.1| amino acid ABC transporter substrate-binding protein, PAAT family
           ;amino acid ABC transporter membrane protein, PAAT
           family [Mycobacterium sp. Spyr1]
          Length = 598

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 16/238 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                              +     + + + ++G++L   A  ++     +  +    +Y
Sbjct: 357 SFLDWDLYKQAIPDLFKTGLPNTLILTICASIIGLILG-MALAIAGISKSRWLRWPARVY 415

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              F   GLP +V+I L          LG    +G  T +  F     AL    AA++ E
Sbjct: 416 TDIF--RGLPEVVIILLI--------GLGVGPVVGHLTNNNPFPLGIAALGLMAAAYVGE 465

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG+ +V  GQ+EA+ ALG ++  + RLV++PQ +R ++P L +Q+++LLK SSL   
Sbjct: 466 IFRSGIQSVDPGQLEASRALGFSYSTSMRLVVVPQGVRRVLPALMNQFISLLKASSLVYF 525

Query: 344 VGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G      +L  VG  +  QTG  +  ++     YL+L+I +   +N ++ ++    +
Sbjct: 526 LGLIANQRELFQVGRDLNAQTGN-LSPLVAAGLFYLALTIPLTHLVNYIDVRLRRGRR 582



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 17/218 (7%)

Query: 72  IDQGIVPYTSDSSYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           + Q    +     Y  A       G  NT  L     I   I+G  +    +S ++ + W
Sbjct: 351 LSQLAASFLDWDLYKQAIPDLFKTGLPNTLILTICASIIGLILGMALAIAGISKSRWLRW 410

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             RVY ++FR +P +V+I  +   V  V+    ++   P G+       +     +  + 
Sbjct: 411 PARVYTDIFRGLPEVVIILLIGLGVGPVVGHLTNNNPFPLGIAALGLMAAAYVGEIFRSG 470

Query: 188 KIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
              V       S  LG   S     +      +  + LP L      +    +LV     
Sbjct: 471 IQSVDPGQLEASRALGFSYSTSMRLVVVPQGVR--RVLPALMNQFISLLKASSLV----- 523

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           Y L         F            +S  +A   +  A
Sbjct: 524 YFLGLIANQRELFQVGRDLNAQTGNLSPLVAAGLFYLA 561


>gi|302526883|ref|ZP_07279225.1| predicted protein [Streptomyces sp. AA4]
 gi|302435778|gb|EFL07594.1| predicted protein [Streptomyces sp. AA4]
          Length = 495

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 13/187 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +       + +  +Y+S  +I G P +V +   Y   F  P L            P   +
Sbjct: 321 KLSKIAPVRWIGNVYVS--VIRGTPFVVQLFFIY---FGLPQL--------GLQLPPMTA 367

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             ++L  Y+ +++ EI R  + ++ RGQ+EAA + G++   A R V++PQA   ++PPL 
Sbjct: 368 GIVSLGLYSGSYVTEIFRGAVQSIDRGQLEAARSCGMSQVSAMRHVIIPQAFLRMLPPLG 427

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +++++L KNS+L   V   +L  VG TII++T  A+ + L    +Y  L+ +I+     L
Sbjct: 428 NEFVSLTKNSALVSFVTIHELFLVGQTIISRTFDALTVYLFIGLLYYLLTNLISGTTRTL 487

Query: 389 NAKIALK 395
             K+A+ 
Sbjct: 488 EKKMAVY 494



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + +  +    +  + ++GTL G  +LS    V WI  VYV V R  P +V +FF+
Sbjct: 292 LWQGLLVSLQVILLALALSLLLGTLGGFAKLSKIAPVRWIGNVYVSVIRGTPFVVQLFFI 351

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 352 YFGLPQL 358


>gi|163789714|ref|ZP_02184151.1| predicted transporter subunit: membrane component of ABC
           superfamily [Carnobacterium sp. AT7]
 gi|328956822|ref|YP_004374208.1| cystine ABC transporter [Carnobacterium sp. 17-4]
 gi|159874936|gb|EDP69003.1| predicted transporter subunit: membrane component of ABC
           superfamily [Carnobacterium sp. AT7]
 gi|328673146|gb|AEB29192.1| cystine ABC transporter [Carnobacterium sp. 17-4]
          Length = 214

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 14/223 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + + F          I + S   G ++ +    ++R    K  +A+   Y+S  +I G P
Sbjct: 6   QNIPFLLQGAYYTLLITLVSMFFGSLIGIIV-AIARLKGNKAIQAVARGYVS--IIRGTP 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TLV I + Y              +          + +IALS    A+++E +R  L ++P
Sbjct: 63  TLVQIIIIYY-----------GLVDFGISLDPLPAAFIALSVNNGAYLSESIRGALQSIP 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA A G+T  +A R ++LPQA+R  IPP+ + ++ +LK +SL   +   +L+   
Sbjct: 112 KGQMEAAYATGMTPWQAMRRIILPQAIRIAIPPVGNTFIGMLKETSLVSVISVTELLRSA 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +I Q    +   L    IY  +S + +  +N+L A++++ E
Sbjct: 172 QLLIAQYYSYMPFYLGIAVIYWIMSTVFSFLLNKLEARMSIYE 214



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    M   ++IG +V   RL  NK +  + R YV + R  P LV I  +
Sbjct: 11  LLQGAYYTLLITLVSMFFGSLIGIIVAIARLKGNKAIQAVARGYVSIIRGTPTLVQIIII 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  ++      D        + +NN
Sbjct: 71  YYGLVDFGISLDPLPAAFIALSVNN 95


>gi|308187256|ref|YP_003931387.1| ABC transport system permease protein [Pantoea vagans C9-1]
 gi|308057766|gb|ADO09938.1| Putative ABC transport system permease protein [Pantoea vagans
           C9-1]
          Length = 222

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   +      L     T+  +     F  +LG +L+L   RLSR +  +      L
Sbjct: 2   QESLQLVLDSAPFLLKGALFTLQLSIGGMFFGLLLGFILALM--RLSRFWPVRW-----L 54

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             I   +  G P +  + + Y        L QF             S  I LS  TAA+ 
Sbjct: 55  ARIYVSIFRGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNTAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  + ++ RGQ EAA ++G+T  +  R V+LPQA R+ +PPL + +++L+K++SLA
Sbjct: 104 SESLRGAIASIERGQWEAAASIGMTRWQTLRRVILPQAARTALPPLGNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   +L      I ++T +   + L    IY  ++ +++   NRL   +  ++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNRLEQHVNRQD 218



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G ++   RLS    V W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGALFTLQLSIGGMFFGLLLGFILALMRLSRFWPVRWLARIYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLN 98


>gi|319782257|ref|YP_004141733.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168145|gb|ADV11683.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 313

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 16/271 (5%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           ++      +++ FL     +  P      V+ + +  +   +     T+   A I + + 
Sbjct: 32  IWVGTALALLVAFLIIRAFASNPAFAWPTVVSYLLHPSV--MRGLGNTLMLTAVIMILAI 89

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD------- 247
           V+G V+++      R       +A   LY+  F   G+P L+ +   + L          
Sbjct: 90  VVGTVIAIM-----RVSPSPVLRAFAGLYVWFF--RGVPALIQLIFWFNLSLLVREVSLT 142

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +G    +  +     F S  +ALS   A ++AEI+R+G+ +VP GQ EAA ALG+ +
Sbjct: 143 IPFVGTLFSVRTNDFMTPFFSAVVALSLCEAGYMAEIIRAGIKSVPSGQAEAASALGMPY 202

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R   + + LPQAMR ++PP  ++ +NLLK +SL   +   DL     +I  +T + I ++
Sbjct: 203 RMILKRITLPQAMRFVLPPTGNEAINLLKMTSLVTFIAVDDLFYSAQSIYARTFETIPLL 262

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++  F YL++  ++++  + L       + +
Sbjct: 263 IVVAFWYLAVVSIMSVGQHFLERHFGRSDTR 293



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  L    MI A ++GT++   R+S + ++     +YV  FR +P L+ + F +  
Sbjct: 73  GLGNTLMLTAVIMILAIVVGTVIAIMRVSPSPVLRAFAGLYVWFFRGVPALIQLIFWFNL 132

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
            L V  +      +     +       P  +      +    ++  I+ +   +  S   
Sbjct: 133 SLLVREVSLTIPFVGTLFSVRTNDFMTPFFSAVVALSLCEAGYMAEIIRAGIKSVPSGQA 192

Query: 212 HEKTGKALPLLYI 224
              +   +P   I
Sbjct: 193 EAASALGMPYRMI 205


>gi|172040836|ref|YP_001800550.1| putative ABC transport system, permease protein [Corynebacterium
           urealyticum DSM 7109]
 gi|171852140|emb|CAQ05116.1| putative ABC transport system, permease protein [Corynebacterium
           urealyticum DSM 7109]
          Length = 325

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            I      +L    +   +    +G     + +    + +       + V + +LG+ L 
Sbjct: 35  WITAAVLVILLAWFLISAAGNEAYGWETYRQYIFDTRIAVAAGHTLLLTVLAMILGVALG 94

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--FNFIGG 259
                L R       + +  L++  F   G P  V +     L     V+          
Sbjct: 95  SIIAVL-RMSPNGVLRGVSWLFLWVF--RGTPVYVQLMFWGLLGSIYQVVNIGIAEIDMQ 151

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             +S  F    I L    AA++AEIVR+G+ AVP GQ EA+ ALG+T  +  R  +LPQA
Sbjct: 152 DFLSNMFWLAVIGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWWQNMRRTVLPQA 211

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  ++ +++LK +SL + V ++ +L      I N   Q + ++L+    YL ++
Sbjct: 212 MRIIIPPTGNELISMLKTTSLVIVVPYSGELFGKATDISNSIFQPVPLLLVAASWYLVIT 271

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +  + L    +    +
Sbjct: 272 SVLMVGQHYLERYFSRGSSR 291



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I V   +T  L    MI    +G+++   R+S N ++  +  +++ VFR  P  V + F 
Sbjct: 72  IAVAAGHTLLLTVLAMILGVALGSIIAVLRMSPNGVLRGVSWLFLWVFRGTPVYVQLMFW 131

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
                    +      +    FL+N   
Sbjct: 132 GLLGSIYQVVNIGIAEIDMQDFLSNMFW 159


>gi|90962595|ref|YP_536511.1| amino acid ABC transporter permease [Lactobacillus salivarius
           UCC118]
 gi|90821789|gb|ABE00428.1| Amino acid ABC transporter, permease protein [Lactobacillus
           salivarius UCC118]
          Length = 231

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 6/204 (2%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEK--TGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + + SF+LG++L+L  T L R    K        +     +L    P LV + + Y   F
Sbjct: 23  LAIVSFILGLILALV-TALIRISQTKGPFLVIKAIFRFYVWLFRSTPLLVQLFIVY---F 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L              F S  I  S  T A+ +E +R+ + ++P+GQ EAA ++G+T
Sbjct: 79  GLPYLKIKGLAPEGIKLDPFTSGIIVFSLNTGAYASETIRAAITSIPKGQWEAAASIGMT 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H++A   +++PQA R  +PPL + ++ L+K++SLA ++   ++  V   I  +  + + +
Sbjct: 139 HKQALMRIIIPQAARVSLPPLANSFIGLVKDTSLAASITIVEMFEVSQQIAAENYEPLVM 198

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
                 +Y  L  +++     L  
Sbjct: 199 YCTVAVLYAILCTVLSFLQGWLEK 222


>gi|323143936|ref|ZP_08078594.1| glutamine ABC transporter permease protein [Succinatimonas hippei
           YIT 12066]
 gi|322416300|gb|EFY06976.1| glutamine ABC transporter permease protein [Succinatimonas hippei
           YIT 12066]
          Length = 218

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 17/233 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR--LSRHFHEKTGKALP 220
           +  PF + L    L    +      +I   +  LG ++ LF     LSR+++ +      
Sbjct: 1   MPFPFDISLIIDSLPLLGIGALVTIEITAVAVALGTLIGLFVGIAELSRYWYFRIPSK-- 58

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
              I    I G P LV I + Y              I G  V P F++   A S  + A+
Sbjct: 59  ---IYVDFIRGTPLLVQIFIIYF---------ALPIILGVRVEP-FVAAVAACSINSGAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI R+G+ ++ +GQMEA  +LG++  +    +++PQA R IIP L ++++ +LK+SSL
Sbjct: 106 VAEIFRAGIQSIDKGQMEAGRSLGMSWGQTMIHIVIPQAFRRIIPQLGNEFIAMLKDSSL 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +GF +L   G  II  T  ++EI      IYL +++ I  F+  L  +  
Sbjct: 166 VSVIGFEELTRKGQLIIASTYGSLEIWTAVAIIYLIMTLSITRFVAFLEKRFK 218



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + +G + T  +    +   T+IG  VG   LS         ++YV+  R  P LV IF +
Sbjct: 17  LGIGALVTIEITAVAVALGTLIGLFVGIAELSRYWYFRIPSKIYVDFIRGTPLLVQIFII 76

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 77  YFALP 81


>gi|227891344|ref|ZP_04009149.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|301301148|ref|ZP_07207305.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|227866922|gb|EEJ74343.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|300851277|gb|EFK79004.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 231

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 6/204 (2%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEK--TGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + + SF+LG++L+L  T L R    K        +     +L    P LV + + Y   F
Sbjct: 23  LAIISFILGLILALV-TALIRISQTKGPFLVIKAIFRFYVWLFRSTPLLVQLFIVY---F 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L              F S  I  S  T A+ +E +R+ + ++P+GQ EAA ++G+T
Sbjct: 79  GLPYLKIKGLAPEGIKLDPFTSGIIVFSLNTGAYASETIRAAITSIPKGQWEAAASIGMT 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H++A   +++PQA R  +PPL + ++ L+K++SLA ++   ++  V   I  +  + + +
Sbjct: 139 HKQALMRIIIPQAARVSLPPLANSFIGLVKDTSLAASITIVEMFEVSQQIAAENYEPLVM 198

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
                 +Y  L  +++     L  
Sbjct: 199 YCTVAVLYAILCTVLSFLQGWLEK 222


>gi|225163802|ref|ZP_03726100.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Opitutaceae bacterium TAV2]
 gi|224801595|gb|EEG19893.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Opitutaceae bacterium TAV2]
          Length = 229

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 4/226 (1%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L F    +     + + S +LG+ L +    L+R       +     Y+   ++ G 
Sbjct: 8   QEELPFLLGGVKITLLVTLVSVILGVTLGVGV-ALTRLSSHAWLRLPATAYVE--VLRGT 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y   F   +      + G   +    +  +AL   ++A++ EI R G+ +V
Sbjct: 65  PMLVQIFIMYFAFFPM-LAEHVPGLEGLARANAIYAGMLALGVNSSAYLGEIFRGGIQSV 123

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EA  +LG+T  +  R ++LPQA+ + +P + ++++ L+K+SSL  A+  ADL   
Sbjct: 124 DIGQYEAGRSLGMTPYRIMRHIVLPQALVNALPAVGNEFVTLIKDSSLVSAIAVADLTYR 183

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   + L    IY  L+   +  +     K+ + + +
Sbjct: 184 AQQAGGRSYEFFSMYLAIAIIYFCLTFAASRGLAVFEKKLRVYDPR 229



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 29/65 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I    +G  V   RLS++  +      YVEV R  P LV IF +
Sbjct: 14  LLGGVKITLLVTLVSVILGVTLGVGVALTRLSSHAWLRLPATAYVEVLRGTPMLVQIFIM 73

Query: 149 YKSVL 153
           Y +  
Sbjct: 74  YFAFF 78


>gi|156932773|ref|YP_001436689.1| hypothetical protein ESA_00563 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531027|gb|ABU75853.1| hypothetical protein ESA_00563 [Cronobacter sakazakii ATCC BAA-894]
          Length = 256

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 15/243 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYISTFL- 228
                +    +T+       +   + G+ L L     + H   K   + L    +  ++ 
Sbjct: 14  YGPLFMQGAWMTIKCTIICVILGTLWGLTLGLGRMAHAEHGPWKYVLRYLVQFPVRFYVS 73

Query: 229 -IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSC 275
              G P  V I + +       +  +  ++  S +               F+S  +A++ 
Sbjct: 74  AFRGTPLFVQIMVVHFALVPLFINPRDGWLVESGLMSSEFARMLRSDYGAFLSCIVAITL 133

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+++EI R+G+ ++ RGQMEA+ ALG+   K  R V+LPQA R I+PPL +  + ++
Sbjct: 134 NAGAYVSEIFRAGIQSIDRGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNAIAIV 193

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+SSLA A+G ADL     T+        E  L    +Y  ++ +++  + RL  +    
Sbjct: 194 KDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSQLVARLEKRFGKS 253

Query: 396 EKK 398
           + +
Sbjct: 254 DSR 256



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVY 132
             Y    + G   T       +I  T+ G  +G GR++             LV +  R Y
Sbjct: 12  QEYGPLFMQGAWMTIKCTIICVILGTLWGLTLGLGRMAHAEHGPWKYVLRYLVQFPVRFY 71

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V  FR  P  V I  ++ +++ +   P    ++  G+  +       +      + I   
Sbjct: 72  VSAFRGTPLFVQIMVVHFALVPLFINPRDGWLVESGLMSSEFARMLRSDYGAFLSCIVAI 131

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 132 TLNAGAYVS 140


>gi|238750581|ref|ZP_04612081.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia rohdei ATCC 43380]
 gi|238711229|gb|EEQ03447.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia rohdei ATCC 43380]
          Length = 239

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 21/234 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--------IFGLPTLV 236
              K  +   +LG    L    L R      G   P+LY             I G P  V
Sbjct: 6   MTIKCTIVCVILGTTWGLTLG-LGRLAQAPHGIWKPVLYYCVQWPVRIYISAIRGTPLFV 64

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEI 284
            I + +       +  +   +  + +               F+S  +A++    A+++EI
Sbjct: 65  QIMVVHFALVPLFINPRDGILVTNGIISSDFARMLRSDYGAFLSCVVAITLNAGAYVSEI 124

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++PPL +  + ++K+SSLA A+
Sbjct: 125 FRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPPLGNNAIAIVKDSSLASAI 184

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ADL     T+        E  LI   IY  ++ +++L +  +  +    + +
Sbjct: 185 GLADLAYAARTVSGAYATYWEPYLIISLIYWVITFLLSLLVRHMEKRFGKSDSR 238



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 10/120 (8%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVYVEVFRNIPP 141
           G + T       +I  T  G  +G GRL+              V W  R+Y+   R  P 
Sbjct: 3   GALMTIKCTIVCVILGTTWGLTLGLGRLAQAPHGIWKPVLYYCVQWPVRIYISAIRGTPL 62

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            V I  ++ +++ +   P   I++  G+  ++      +      + +   +   G  +S
Sbjct: 63  FVQIMVVHFALVPLFINPRDGILVTNGIISSDFARMLRSDYGAFLSCVVAITLNAGAYVS 122


>gi|303246864|ref|ZP_07333141.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491881|gb|EFL51761.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 233

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 5/234 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F   +      +    + T  KI   S VL +VL      + R    +        
Sbjct: 3   YHFDFTQVVTGEYGQWLVTGLVTTLKISAVSIVLSLVLGTLV-AVMRLSKVRPLVWASAT 61

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y   F     P LV I   Y   ++  VL QF          EF    IAL+ YT+AFIA
Sbjct: 62  YTEFF--RNTPLLVQIFFWYFGSYN--VLPQFVNDWLYKQDFEFACGVIALTVYTSAFIA 117

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSG+ ++P+ Q+EA+ A GL+  +A   V+LPQA R IIPPL SQ+LNL+KNSSL +
Sbjct: 118 EEIRSGVFSIPKNQLEASRACGLSFTQAMVYVILPQAFRVIIPPLISQFLNLIKNSSLVM 177

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G  DL  +   I   T    E   +   +YL +S++++  +   + ++    
Sbjct: 178 TIGVMDLTYMARQIEAHTFHGFEAFTVTTCMYLCISLVVSAGVTLYSRRVLRVR 231



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 41/85 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ G V T  ++   ++ + ++GTLV   RLS  + + W    Y E FRN P 
Sbjct: 12  TGEYGQWLVTGLVTTLKISAVSIVLSLVLGTLVAVMRLSKVRPLVWASATYTEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV IFF Y    +VLP   +  +  
Sbjct: 72  LVQIFFWYFGSYNVLPQFVNDWLYK 96


>gi|289674586|ref|ZP_06495476.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
 gi|302186281|ref|ZP_07262954.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|330938697|gb|EGH42255.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330951253|gb|EGH51513.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 222

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 13/188 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K    +  +Y+S F   G P LV + + Y   +  P L       G  + P   +
Sbjct: 45  RLSRIKPVNWIARIYVSFF--RGTPLLVQLFVIY---YGLPEL-------GIQLEP-LSA 91

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL 
Sbjct: 92  ALIGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLG 151

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   N+L
Sbjct: 152 NSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKL 211

Query: 389 NAKIALKE 396
            A++   +
Sbjct: 212 EARVNRHD 219



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  K V WI R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSIGGMFFGLLLGFGLALMRLSRIKPVNWIARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +       G  LN 
Sbjct: 76  YYGLPELGIQLEPLSAALIGFSLNM 100


>gi|168462510|ref|ZP_02696441.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|195633964|gb|EDX52316.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
          Length = 222

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG VL+L      R       + L   YIS F   G 
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFVLALM-----RMSPLWLVRWLARFYISIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  + + Y        L QF             +  I LS  TAA+ +E +R+ + A+
Sbjct: 66  PLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I ++T +   + L    IY  ++ +++   N    ++  +EK+
Sbjct: 175 AQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQEKE 220



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S   LV W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWLVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|239909116|ref|YP_002955858.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239798983|dbj|BAH77972.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 247

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 112/236 (47%), Gaps = 5/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               FG  ++     +    +    +I   S VL + L      L R    K        
Sbjct: 17  YQFDFGQVVSGEYGQWILSGLGVTLQISGISIVLSLALGTVIAVL-RLSKVKPLVWFAAS 75

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +   F     P LV I   Y   +   VL +           EF    IAL+ YTAAFIA
Sbjct: 76  FTEFF--RNTPLLVQIFFWYFGSYS--VLPEAVNQWLYARDFEFACGVIALTVYTAAFIA 131

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSG+ ++P+ Q+EA+ A GL+  +A   V+LPQA R IIPPL SQ+LNL+KNSSL +
Sbjct: 132 EEIRSGIFSIPKNQLEASRACGLSFLQAMAYVILPQAFRVIIPPLISQFLNLIKNSSLVM 191

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  DL  +   I   T    E   +   IYL++S++++L +N  N ++     +
Sbjct: 192 TIGVMDLTYMARQIEAHTFHGFEAFTVSTLIYLTISLIVSLGVNLYNRRVLHVRSR 247



 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 39/84 (46%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   IL G   T  ++   ++ +  +GT++   RLS  K + W    + E FRN P 
Sbjct: 26  SGEYGQWILSGLGVTLQISGISIVLSLALGTVIAVLRLSKVKPLVWFAASFTEFFRNTPL 85

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVL 165
           LV IFF Y    SVLP   +  + 
Sbjct: 86  LVQIFFWYFGSYSVLPEAVNQWLY 109


>gi|199599469|ref|ZP_03212861.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|199589641|gb|EDY97755.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
          Length = 475

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               ++    TM        F+  +GI++ L           +  + +   +I  F   G
Sbjct: 270 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLG-----VLPNRFARGVATTFIYIF--RG 322

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         +  P F++  I L+    A+ A  V+ G+ A
Sbjct: 323 LPLLVLALFIYT---GVPSLIG-------SKIPAFVAGIITLTLNEGAYTAAFVKGGIQA 372

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 373 VDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQ 432

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  +  +I  +   IYL +  ++    N +  ++
Sbjct: 433 TGKIIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQQRM 473



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +    +  AT +G LVG   +  N+    +   ++ +FR +P LV+ 
Sbjct: 270 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLGVLPNRFARGVATTFIYIFRGLPLLVLA 329

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 330 LFIYTGVPSL 339


>gi|311032512|ref|ZP_07710602.1| amino acid ABC transporter (permease) [Bacillus sp. m3-13]
          Length = 233

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 102/207 (49%), Gaps = 14/207 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF  G+++++    L+R    K  + +  +Y+S  +I G P LV +   +      
Sbjct: 38  LTLLSFSFGLMIAIL-MALARISPIKPLQIVARIYVS--IIRGTPLLVQLFFIFY----- 89

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                            F +  IA S    A+ +EI+R+ +++ P+GQ EAA ++G+++ 
Sbjct: 90  ------GLPSIGVTIDSFPAAVIAFSLNVGAYASEIIRAAILSTPKGQWEAAYSMGMSYP 143

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A R ++LPQA R  IPPL++ +++L+K++SLA  +   ++  V   I     + + +  
Sbjct: 144 QALRRIILPQAARVSIPPLSNSFISLVKDTSLASLILVTEMFRVAQQIAATNYEFLLLYA 203

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
               IY  +   ++L   R+  ++   
Sbjct: 204 QAGAIYWVICFCLSLVQGRVERRLDRY 230



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             NT  L         +I  L+   R+S  K +  + R+YV + R  P LV +FF++  +
Sbjct: 32  LSNTIPLTLLSFSFGLMIAILMALARISPIKPLQIVARIYVSIIRGTPLLVQLFFIFYGL 91

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            S+    D          LN
Sbjct: 92  PSIGVTIDSFPAAVIAFSLN 111


>gi|242237844|ref|YP_002986025.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242129901|gb|ACS84203.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 326

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 11/265 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV    +         +   +    + + +           ++    + V + +L  V  
Sbjct: 33  LVSWIVVSLVAADFFWLVATNPNFEWQVVVQWFTEGSVMKGLEVTLGLTVIAMLL-GVAL 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                ++R    +    L  LYI  F   G P LV +   Y L    P +     I G T
Sbjct: 92  GLLLAVARLSDNRLLSGLSGLYIWFF--RGTPLLVQLIFWYNLSTLFPTISLAIPITGPT 149

Query: 262 VS--------PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                         +    L+   AA++AEI+R+GL++V +GQ+E   A G++  +A R 
Sbjct: 150 FISWKTNDLITPLTAAIAGLALNEAAYMAEIIRAGLLSVDQGQIETTQAFGMSRVRALRR 209

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQAMR+IIPP  +Q ++++K +SL   +   DL+     I N+T + I ++++ +  
Sbjct: 210 IIIPQAMRAIIPPTGNQLISMIKATSLVSVIAMGDLLYSVQAIYNRTFEIIPMLMVAVIW 269

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           YL ++ ++ +  + +    A   ++
Sbjct: 270 YLLITSILNVGQSAIERYYARGSRR 294



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 1/102 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    M+    +G L+   RLS N+L++ +  +Y+  FR  P LV + F Y
Sbjct: 71  MKGLEVTLGLTVIAMLLGVALGLLLAVARLSDNRLLSGLSGLYIWFFRGTPLLVQLIFWY 130

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
                + P    +I +    F++ +     T      A + +
Sbjct: 131 NLST-LFPTISLAIPITGPTFISWKTNDLITPLTAAIAGLAL 171


>gi|189425081|ref|YP_001952258.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           lovleyi SZ]
 gi|189421340|gb|ACD95738.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           lovleyi SZ]
          Length = 748

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 101/265 (38%), Gaps = 15/265 (5%)

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             +    V    N   ++V      +  +        +       ++          + T
Sbjct: 485 KKLINFSVPYITNDISVLVRKTGSSATTAAPSFFSDLVTSFQSNIIHEMRYLLILDGLKT 544

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
              I VF+ + G +L        R    +   A   LYI   ++ G P LVL+ L + + 
Sbjct: 545 TVVISVFATLFGTLLGALIC-FMRMAKSRLLSAPARLYI--AILRGTPVLVLLMLIFYVV 601

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F             S      +   IA      A+ AEI R+G+  V +GQ EA I+LG 
Sbjct: 602 F------------ASINISPVIVAVIAFGMNFGAYTAEIFRTGIEGVEKGQTEAGISLGF 649

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T       ++LPQ +R I+P    ++++L+K +S+   +   DL      I ++T  A  
Sbjct: 650 TRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAFF 709

Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390
            +++   +Y  +S  +   +  L  
Sbjct: 710 PLVMVAILYFLISWTLMQSLEYLER 734



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++    +  T++G L+   R++ ++L++   R+Y+ + R  P LV++  +
Sbjct: 538 ILDGLKTTVVISVFATLFGTLLGALICFMRMAKSRLLSAPARLYIAILRGTPVLVLLMLI 597

Query: 149 YKSVL-SVLPIPDHSIVLPFGM 169
           +  V  S+   P    V+ FGM
Sbjct: 598 FYVVFASINISPVIVAVIAFGM 619


>gi|302336895|ref|YP_003802101.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634080|gb|ADK79507.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 225

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 15/217 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + +F+   G++L      L R    K    +  LY+   +I G P L
Sbjct: 20  LHLLLNGLKVTIVVTLFAITAGVILGTLL-ALMRLSKNKVANIISKLYVE--IIRGTPVL 76

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y + F             +    + M+  +A    + A++AEI+R+G+ AV +G
Sbjct: 77  VQLLIIYFVIF------------RALDVDKTMASSLAFGINSGAYVAEIIRAGIQAVDKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL HR A + ++LPQA+++I+P L ++++ LLK +S+   +G  DL+  G  
Sbjct: 125 QMEAARSLGLPHRLAMKEIILPQAIKNILPALGNEFIVLLKETSIIGFIGGNDLMRAGNK 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I + T +A   +     IYL +++ ++  +NR   ++
Sbjct: 185 IRSITYEATVPLFATAVIYLIITLSLSHLLNRYERRL 221



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +    I+GTL+   RLS NK+   I ++YVE+ R  P LV +  +
Sbjct: 23  LLNGLKVTIVVTLFAITAGVILGTLLALMRLSKNKVANIISKLYVEIIRGTPVLVQLLII 82

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 83  YFVIFRA 89


>gi|107022625|ref|YP_620952.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|105892814|gb|ABF75979.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 240

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 11/195 (5%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A R +R           L      L+ G P LV I + Y   +  P L       G ++ 
Sbjct: 57  AERSARRLRIWVNALAWLARAYVSLMRGTPLLVQIFVIY---YGLPSL-------GISLD 106

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P   +  IALS   AA+++E +R  +  + RGQ  AA +LGL+  +  R V+ PQA+R  
Sbjct: 107 PT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAAYSLGLSWGQTLRYVIGPQALRIA 165

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L++  ++L+K++SL   +   +L+     +I  T Q + + L    +Y  L  ++  
Sbjct: 166 VPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAATYQPLPLYLAAAAVYWVLCQILEW 225

Query: 384 FMNRLNAKIALKEKK 398
                  +++L  + 
Sbjct: 226 GQRWYEKRLSLPSRH 240


>gi|291456221|ref|ZP_06595611.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Bifidobacterium breve DSM 20213]
 gi|291381498|gb|EFE89016.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Bifidobacterium breve DSM 20213]
          Length = 327

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+      +  ++  P       +    N   L     T+       V + +L +
Sbjct: 29  VAAVIVVLLAAMLIQGMITNPRLDWPTVWKYLFNENVLEGIQYTLTLTVISMVVAIILSV 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           +L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 89  ILAIM-----RKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGLFAVLIPKISLGIPFTSV 143

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + V   F + +I L+   AA+++EIVR+GL AV  GQ EAA ALG+      R
Sbjct: 144 EFWSIDSNVVVTAFNAAWIGLALNEAAYLSEIVRAGLEAVDPGQTEAAKALGMNRTLIMR 203

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR IIPP  ++ + +LK +SL  AV F  +L      I N+  + I ++++  
Sbjct: 204 RIVLPQAMRIIIPPTGNETIGMLKTTSLVTAVPFTLELQFATNAIANRIYKPIPLLIVAC 263

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
           F YL ++ ++ +  +RL A   
Sbjct: 264 FWYLLITSILMVCQSRLEAHFG 285



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+ A+++ ++    +  +  N  + +      +L                        +L
Sbjct: 28  IVAAVIVVLLAAMLIQGMITN-PRLDWPTVWKYLFNEN--------------------VL 66

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  L    M+ A I+  ++   R S N ++  +   ++  FR  P    + F   
Sbjct: 67  EGIQYTLTLTVISMVVAIILSVILAIMRKSINPVLRGVSWFFIWFFRGTPVYTQLIFWGL 126

Query: 151 SVLSVLP 157
             + +  
Sbjct: 127 FAVLIPK 133


>gi|239834956|ref|ZP_04683284.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239823019|gb|EEQ94588.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 308

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/267 (23%), Positives = 115/267 (43%), Gaps = 14/267 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I   V+I         +    +    +      +   L+    T+       +F F +
Sbjct: 27  RWITGAVLILIALSFANMLATNENLQWNIVVRYMFHPDILAGLARTLFLTFAAMIFGFAI 86

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DKP 249
           GI+L++      R       +    L+I  F   G+P LV +   Y L           P
Sbjct: 87  GIILAVM-----RLSANPVLQWASWLWIWFF--RGVPPLVQLIFWYNLALLVPNLTIGIP 139

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                     +T+     +  + LS   +A+ AE +R+G+ A+  GQ EAA  LG+T  +
Sbjct: 140 FGPTLWSWDMNTLITPMSAALLGLSFTESAYAAETIRAGIQAINPGQTEAAATLGMTRFQ 199

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + ++LPQA+R IIPP+ +  +++LK +SL   +   DL+     I ++T Q I ++++
Sbjct: 200 IMKRIVLPQAIRIIIPPIGNDTISMLKFTSLVSVLALPDLLYSAQMIYSRTYQTIPLLIV 259

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
               YL LS  + +  + +   +  ++
Sbjct: 260 ATIWYLILSTALTIIEHHIENHLKSRQ 286



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +L F+ MI    IG ++   RLSAN ++ W   +++  FR +PPLV + F 
Sbjct: 65  ILAGLARTLFLTFAAMIFGFAIGIILAVMRLSANPVLQWASWLWIWFFRGVPPLVQLIFW 124

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           Y   L V   P+ +I +PFG  L +  ++     M        F+
Sbjct: 125 YNLALLV---PNLTIGIPFGPTLWSWDMNTLITPMSAALLGLSFT 166


>gi|161613487|ref|YP_001587452.1| hypothetical protein SPAB_01204 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168234122|ref|ZP_02659180.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168244799|ref|ZP_02669731.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168259764|ref|ZP_02681737.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|194450867|ref|YP_002046003.1| L-cystine transport system permease TcyB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194469992|ref|ZP_03075976.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197265602|ref|ZP_03165676.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205352353|ref|YP_002226154.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856534|ref|YP_002243185.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|161362851|gb|ABX66619.1| hypothetical protein SPAB_01204 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194409171|gb|ACF69390.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194456356|gb|EDX45195.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197243857|gb|EDY26477.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205272134|emb|CAR36987.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205331848|gb|EDZ18612.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205336344|gb|EDZ23108.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205351153|gb|EDZ37784.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708337|emb|CAR32640.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|326627403|gb|EGE33746.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 222

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG VL+L      R       + L   YIS F   G 
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFVLALM-----RMSPLWLVRWLARFYISIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  + + Y        L QF             +  I LS  TAA+ +E +R+ + A+
Sbjct: 66  PLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 175 AQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S   LV W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWLVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|149181553|ref|ZP_01860048.1| ABC transporter (permease) [Bacillus sp. SG-1]
 gi|148850803|gb|EDL64958.1| ABC transporter (permease) [Bacillus sp. SG-1]
          Length = 219

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+   +T+       +  F++G VLSLF     +    K  K     Y S F   G 
Sbjct: 13  PFILNGVWVTLLFVLLSGIVGFIIGTVLSLF-----KIGRIKVLKWFADAYTSIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + L Y   F  P L  F+        P F++  +A    + A+I+EI+R+G+ AV
Sbjct: 66  PLILQLMLIY---FATPQLTGFDI-------PPFLAGMLAFGLNSGAYISEIIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ALG+++R   + ++LPQA+++I+P L ++Y+ L K S++   +GF D++  
Sbjct: 116 DKGQQEAAEALGISYRPMMKDIILPQALKNILPALMNEYITLTKESAIVSTIGFLDIMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   T  A E ++    IY  L + + L   +L  ++   E
Sbjct: 176 SQIVSANTYTAFEPLIFAGLIYYVLVMCLTLLGRQLERRLRRSE 219



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T        I   IIGT++   ++   K++ W    Y  +FR  P ++ +  +
Sbjct: 15  ILNGVWVTLLFVLLSGIVGFIIGTVLSLFKIGRIKVLKWFADAYTSIFRGTPLILQLMLI 74

Query: 149 YKSVLSV 155
           Y +   +
Sbjct: 75  YFATPQL 81


>gi|300783425|ref|YP_003763716.1| amino acid ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299792939|gb|ADJ43314.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 292

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 10/263 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   +++  L    +++         +P  +F      +    T+         + VL
Sbjct: 17  RWVAAAIIVALLVLLGIALGNAQIAWNQVPDFVF-YKVMATGLLNTVVLAVLSQAVAIVL 75

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIV++L      R       +     YI  F   GLP L+ I L Y L    PV+     
Sbjct: 76  GIVIALL-----RRSANPVARWFAAGYIWIF--RGLPVLLQILLWYNLALVFPVIDIPFL 128

Query: 257 IGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +   T  +   F + ++ L+   +A++AEIVR+GL +V  GQ EAA ++G+T     R V
Sbjct: 129 VHEQTNVLISAFTAAFLGLALNESAYMAEIVRAGLNSVDSGQTEAAKSIGMTPAATLRRV 188

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQAMR IIPP  + ++N+LK +S+A  +G  +L+     I +     +E +L     Y
Sbjct: 189 VLPQAMRVIIPPTGNDFINMLKGTSMASVIGVTELIHAANNISSNNLLVMETLLAAAVWY 248

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           + +  +  +  + L       ++
Sbjct: 249 MVVVTVAGVGQHYLERAFGQADR 271



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 33/73 (45%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            D  +   +  G +NT  LA      A ++G ++   R SAN +  W    Y+ +FR +P
Sbjct: 46  PDFVFYKVMATGLLNTVVLAVLSQAVAIVLGIVIALLRRSANPVARWFAAGYIWIFRGLP 105

Query: 141 PLVVIFFLYKSVL 153
            L+ I   Y   L
Sbjct: 106 VLLQILLWYNLAL 118


>gi|313890332|ref|ZP_07823964.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121318|gb|EFR44425.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 523

 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 10/171 (5%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L I   +  G P +V   + Y                        ++    +S  T A++
Sbjct: 343 LNIYIEIFRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYM 392

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR G+ AV +GQ EAA ALG +H +  R ++LPQ +R+I+P   ++++  +K++S+ 
Sbjct: 393 TEIVRGGIFAVDQGQFEAATALGFSHGQTMRKIVLPQVIRNILPATGNEFVINIKDTSVL 452

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   +L   G T+  Q  Q  +   +   IY  L+  +   +  +  ++
Sbjct: 453 NVISVVELYFSGNTVATQNYQYFQTFSVIALIYFILTFTVTRILRYVERRL 503


>gi|323141718|ref|ZP_08076592.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT
           12067]
 gi|322413793|gb|EFY04638.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT
           12067]
          Length = 264

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 98/244 (40%), Gaps = 19/244 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-------TRLS 208
           +P      V+       +  L    +T+           ++G+++ +             
Sbjct: 1   MPETFFGWVVYLLQQYGSVLLKGAVVTLLLAVVGTFIGCIIGLIVGVIQTIPLEDNDSKV 60

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  + L   Y+  F   G P +V   + Y                         +
Sbjct: 61  KRTLVRCLQRLLDAYVEVF--RGTPMIVQAMVVYYGAMSL----------FDIDMSPLFA 108

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
            ++ +S  T A++AE VR G+ +V  GQ EAAIA+G+ H +  R V+LPQA+R+++P L 
Sbjct: 109 GFLVVSINTGAYMAETVRGGIESVDPGQKEAAIAIGMDHIQTMRCVILPQALRNVMPQLG 168

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  +  +K++S+   +   +L     +      +  EI  I   IY  ++   +  +  L
Sbjct: 169 NNLIINIKDTSVLNVISVTELYFASKSAAGVYYKYFEIFFITCVIYFIMTFTASRLLRWL 228

Query: 389 NAKI 392
            +K+
Sbjct: 229 ESKM 232



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 12/86 (13%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA------------NKLVAWICR 130
             Y + +L G V T  LA  G     IIG +VG  +                + +  +  
Sbjct: 14  QQYGSVLLKGAVVTLLLAVVGTFIGCIIGLIVGVIQTIPLEDNDSKVKRTLVRCLQRLLD 73

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVL 156
            YVEVFR  P +V    +Y   +S+ 
Sbjct: 74  AYVEVFRGTPMIVQAMVVYYGAMSLF 99


>gi|303257952|ref|ZP_07343961.1| amino acid ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|331000077|ref|ZP_08323772.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
 gi|302859295|gb|EFL82377.1| amino acid ABC transporter, permease protein [Burkholderiales
           bacterium 1_1_47]
 gi|329572961|gb|EGG54581.1| ABC transporter, permease protein [Parasutterella excrementihominis
           YIT 11859]
          Length = 222

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 14/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF L +V+++    L ++      + +   Y+  ++I G P LV +   Y +
Sbjct: 23  VTIPLTIISFALSMVIAVVV-ALIQYSKVPVLRQICRFYV--WVIRGTPLLVQL---YVV 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P +          +   F++  I  S    A+ AE +R  L +VP+GQMEA   +G
Sbjct: 77  FFGLPSI--------GIMVDAFLAAVIVFSINEGAYNAETIRGALESVPQGQMEAGRCVG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + +    V+LPQA R+  P L +  ++++K++SLA  +  A++      I  +T + +
Sbjct: 129 LNYFQIMWHVVLPQAFRTAFPALGNSMISMVKDTSLAANITVAEMFFQAQRIAGRTYETM 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + +    IYL  S ++     R   K+ 
Sbjct: 189 AVYIEVALIYLIFSTILEYLQRRGEKKLG 217



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 37/90 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            ++   +  G   T  L       + +I  +V   + S   ++  ICR YV V R  P L
Sbjct: 11  DAFPQLLFKGITVTIPLTIISFALSMVIAVVVALIQYSKVPVLRQICRFYVWVIRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V ++ ++  + S+  + D  +       +N
Sbjct: 71  VQLYVVFFGLPSIGIMVDAFLAAVIVFSIN 100


>gi|163841001|ref|YP_001625406.1| ABC transporter, nucleotide binding/ATPase protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954477|gb|ABY23992.1| ABC transporter, nucleotide binding/ATPase protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 381

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 123/266 (46%), Gaps = 14/266 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  ++V   L     S+L  P     +    F     +     T+          FVL
Sbjct: 37  RIIATVLVALLLAPLAWSLLANPRWEWAVVAQWFTAESVIRGLGSTLLLTVIAGSSGFVL 96

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DKP 249
           G +L+L     S            + +  T++   +P LV + L Y L +         P
Sbjct: 97  GFLLALMRISSSPLLWT-------VSWAYTWIFRSVPLLVQLLLWYNLGYLYEKIQLGVP 149

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F  +  +T+  +F +  + L+ + AA+ AEI+R G+++V +GQ+EAA ALG+   +
Sbjct: 150 FGPVFFEVQTTTLISQFAAAVLGLTLHQAAYSAEIIRGGILSVDQGQLEAAAALGIPRSR 209

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQA+R+I+P   ++ + L+K +S+   + +++L      + N+T Q I ++L+
Sbjct: 210 RALRIVLPQALRAILPSAFNEIIGLVKGTSVVYVLAYSELFYTIQVVYNRTQQVIPLLLV 269

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               Y+ ++ ++++    +  + +  
Sbjct: 270 ATLWYVLITSVLSVAQYYIERRFSRG 295



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 33/98 (33%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  +T  L         ++G L+   R+S++ L+  +   Y  +FR++P LV +   Y  
Sbjct: 78  GLGSTLLLTVIAGSSGFVLGFLLALMRISSSPLLWTVSWAYTWIFRSVPLLVQLLLWYNL 137

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
                 I       P    +    L            +
Sbjct: 138 GYLYEKIQLGVPFGPVFFEVQTTTLISQFAAAVLGLTL 175


>gi|258509858|ref|YP_003172609.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
 gi|257149785|emb|CAR88758.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
          Length = 486

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               ++    TM        F+  +GI++ L           +  + +   +I  F   G
Sbjct: 281 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLG-----VLPNRFARGVATTFIYIF--RG 333

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         +  P F++  I L+    A+ A  V+ G+ A
Sbjct: 334 LPLLVLALFIYT---GVPSLIG-------SKIPAFVAGIITLTLNEGAYTAAFVKGGIQA 383

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 384 VDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQ 443

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  +  +I  +   IYL +  ++    N +  ++
Sbjct: 444 TGKIIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQQRM 484



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +    +  AT +G LVG   +  N+    +   ++ +FR +P LV+ 
Sbjct: 281 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLGVLPNRFARGVATTFIYIFRGLPLLVLA 340

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 341 LFIYTGVPSL 350


>gi|311106036|ref|YP_003978889.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 6 [Achromobacter
           xylosoxidans A8]
 gi|310760725|gb|ADP16174.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 6
           [Achromobacter xylosoxidans A8]
          Length = 222

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + + V+G+++ +         + K      L  +   L  G P LV + + +  
Sbjct: 25  VTAGALLLACVIGLLVGVG------RLNPKRYVIYNLCSVYLLLFRGTPLLVQLFIWF-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P F    + L  Y+ A+++EIVR  + +V RGQ EAA +LG
Sbjct: 77  ---------FGLPHFGITLPAFACGVLGLGMYSGAYVSEIVRGAIQSVDRGQTEAARSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A R+++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++
Sbjct: 128 MSSGQAMRIIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E  L+   IYL L+    L + ++  ++ 
Sbjct: 188 ETYLVVALIYLILTTATMLVLRKVEHRLR 216



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 1/97 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-LVAWICRVYVEV 135
           + ++   +   A++ G V T  +    ++ A +IG LVG GRL+  + ++  +C VY+ +
Sbjct: 3   LDFSPVFADFGALINGAVVTVEVTAGALLLACVIGLLVGVGRLNPKRYVIYNLCSVYLLL 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FR  P LV +F  +  +               G+ + 
Sbjct: 63  FRGTPLLVQLFIWFFGLPHFGITLPAFACGVLGLGMY 99


>gi|145221452|ref|YP_001132130.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145213938|gb|ABP43342.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium gilvum PYR-GCK]
          Length = 598

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 16/238 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                              +     + + + ++G++L   A  ++     +  +    +Y
Sbjct: 357 SFLDWDLYKQAIPDLFKTGLPNTLILTICASIIGLILG-MALAIAGISKSRWLRWPARVY 415

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              F   GLP +V+I L          LG    +G  T +  F     AL    AA++ E
Sbjct: 416 TDIF--RGLPEVVIILLI--------GLGVGPVVGHLTNNNPFPLGIAALGLMAAAYVGE 465

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG+ +V  GQ+EA+ ALG ++  + RLV++PQ +R ++P L +Q+++LLK SSL   
Sbjct: 466 IFRSGIQSVDPGQLEASRALGFSYSTSMRLVVVPQGVRRVLPALMNQFISLLKASSLVYF 525

Query: 344 VGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G      +L  VG  +  QTG  +  ++     YL+L+I +   +N ++ ++    +
Sbjct: 526 LGLIANQRELFQVGRDLNAQTGN-LSPLVAAGLFYLALTIPLTHLVNYIDVRLRRGRR 582



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 17/218 (7%)

Query: 72  IDQGIVPYTSDSSYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           + Q    +     Y  A       G  NT  L     I   I+G  +    +S ++ + W
Sbjct: 351 LSQLAASFLDWDLYKQAIPDLFKTGLPNTLILTICASIIGLILGMALAIAGISKSRWLRW 410

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             RVY ++FR +P +V+I  +   V  V+    ++   P G+       +     +  + 
Sbjct: 411 PARVYTDIFRGLPEVVIILLIGLGVGPVVGHLTNNNPFPLGIAALGLMAAAYVGEIFRSG 470

Query: 188 KIFV------FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
              V       S  LG   S     +      +  + LP L      +    +LV     
Sbjct: 471 IQSVDPGQLEASRALGFSYSTSMRLVVVPQGVR--RVLPALMNQFISLLKASSLV----- 523

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           Y L         F            +S  +A   +  A
Sbjct: 524 YFLGLIANQRELFQVGRDLNAQTGNLSPLVAAGLFYLA 561


>gi|226315384|ref|YP_002775280.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226098334|dbj|BAH46776.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 217

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 13/218 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           KI V S    +++ L    +S     K  + +   Y+    + G P L
Sbjct: 12  LPVLAQGSVVTLKITVISLFFALLIGLLFGLMS-TSRSKLLRGIATAYVDF--LRGTPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I   Y   F  P +            PE  +  +ALS    A++AEI R G++++ +G
Sbjct: 69  VQIFFIY---FGLPPV-------LDIKIPETTAGILALSLNAGAYLAEIFRGGILSIDKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL+H KA RLV+LPQA+R +IP   +Q++  LK++SL   +G  +L++ G  
Sbjct: 119 QMEAARSLGLSHGKAMRLVILPQAVRRMIPAFVNQFIVTLKDTSLLTVIGIRELMNSGEI 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+   ++ EI  +    Y  +  +++L    L  + A
Sbjct: 179 IISSNFRSFEIWAVVAVFYFLMIYILSLLSRSLERRFA 216



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 31/66 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T  +    +  A +IG L G    S +KL+  I   YV+  R  P LV IFF
Sbjct: 14  VLAQGSVVTLKITVISLFFALLIGLLFGLMSTSRSKLLRGIATAYVDFLRGTPLLVQIFF 73

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 74  IYFGLP 79


>gi|198242194|ref|YP_002215134.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197936710|gb|ACH74043.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326622883|gb|EGE29228.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 222

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG VL+L      R       + L   YIS F   G 
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFVLALM-----RMSPLWPVRWLARFYISIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  + + Y        L QF             +  I LS  TAA+ +E +R+ + A+
Sbjct: 66  PLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +  R  +LPQA    +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTLRRAILPQAAHVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 175 AQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 43/101 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|220903865|ref|YP_002479177.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219868164|gb|ACL48499.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 266

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 15/231 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
                 R L +    +    KI V S    + L L    L R  + +    +   Y+   
Sbjct: 51  WPEPYLRILLYLPDGVLITFKITVLSICCAVPLGLLTG-LGRISNNRLINLIASTYVE-- 107

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G+P LV I   Y        L +F  + G T      S  +A+S    A++ E+ R+
Sbjct: 108 VIRGIPLLVQIFYIYY------ALSRFVQVSGVT------SAVVAISFCYGAYMGEVFRA 155

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A+ +GQ EAA +LG    +  R V+LPQAMR+I+PP+ ++ + +LK++SL   +   
Sbjct: 156 GITAINKGQSEAARSLGFNGFQTMRYVVLPQAMRTILPPVGNECIAMLKDTSLVSIMAVP 215

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           D++    + +  T    E   +   +YL ++++++  ++ + A++   + K
Sbjct: 216 DIMQRARSFVGTTYLYFETYTVVALLYLVITLILSKTVSIMEARLNYYDGK 266



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 83  SSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
             Y   +L    G + TF +    +  A  +G L G GR+S N+L+  I   YVEV R I
Sbjct: 53  EPYLRILLYLPDGVLITFKITVLSICCAVPLGLLTGLGRISNNRLINLIASTYVEVIRGI 112

Query: 140 PPLVVIFFLYKSVLSV 155
           P LV IF++Y ++   
Sbjct: 113 PLLVQIFYIYYALSRF 128


>gi|51244842|ref|YP_064726.1| glutamine ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50875879|emb|CAG35719.1| related to glutamine ABC transporter, permease protein
           [Desulfotalea psychrophila LSv54]
          Length = 336

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/184 (34%), Positives = 101/184 (54%), Gaps = 4/184 (2%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           SR       K   ++YI   LI G P +V I L Y +     ++  F    G    P   
Sbjct: 154 SRVSENPLLKWFSIIYIE--LIRGTPLMVQIFLWYFV--VGNLINAFLTQIGIGGVPPLW 209

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              IAL+ +T A+ AEIVR+G+ +V RGQMEAA +LGLT+ ++ R V+LPQA+R I+PPL
Sbjct: 210 FGVIALATFTGAYTAEIVRAGIQSVHRGQMEAARSLGLTYAESMRKVILPQALRRIMPPL 269

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             Q+++L+K+SSL   +   ++      I++ +    E+ +    +YL L+  ++L +  
Sbjct: 270 AGQFISLIKDSSLLGVIAIREVTKATREIVSSSLMPYEMWITCALLYLVLTFALSLCVQH 329

Query: 388 LNAK 391
           L  K
Sbjct: 330 LERK 333



 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+    T  ++F  +I    +G L G  R+S N L+ W   +Y+E+ R  P +V IF  
Sbjct: 126 LLISLWITLKVSFFAIIIGITLGILTGLSRVSENPLLKWFSIIYIELIRGTPLMVQIFLW 185

Query: 149 YKSVLSV 155
           Y  V ++
Sbjct: 186 YFVVGNL 192


>gi|302387424|ref|YP_003823246.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302198052|gb|ADL05623.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 230

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 112/234 (47%), Gaps = 16/234 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F+ +    +    +    KI  F+ ++GI+L  F   + R  +E T K   L  I 
Sbjct: 9   FYQNFIVDDRWKYIADGLQNTLKITFFAVLIGILLG-FLVAIIRSTYENTHKLKILNAIC 67

Query: 226 ---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I G P +V + + Y + F             ST   +  +  +A    + A++A
Sbjct: 68  SVYLTVIRGTPVVVQLMIMYFVIF------------ASTNPGQVPTAILAFGINSGAYVA 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG+ ++ RGQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S+A 
Sbjct: 116 EIFRSGISSIERGQFEAGRSLGFNYAQTMWFIIMPQAFKNVVPTLANEFIVLLKETSVAG 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G  DL   G  I ++T  A   ++    IYL + ++ +  +  L  ++   E
Sbjct: 176 YIGLQDLTKGGDIIKSRTYSAFMPLIAVAIIYLVMVMVFSYLVKLLERRLHRSE 229



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 6/90 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVFRNIP 140
              I  G  NT  + F  ++   ++G LV   R         K++  IC VY+ V R  P
Sbjct: 19  WKYIADGLQNTLKITFFAVLIGILLGFLVAIIRSTYENTHKLKILNAICSVYLTVIRGTP 78

Query: 141 PLVVIFFLYKSVL-SVLPIPDHSIVLPFGM 169
            +V +  +Y  +  S  P    + +L FG+
Sbjct: 79  VVVQLMIMYFVIFASTNPGQVPTAILAFGI 108


>gi|319790880|ref|YP_004152520.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315593343|gb|ADU34409.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 222

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 13/221 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            +G            +I   +  LG VL L       +   +   ++   Y+   +I G 
Sbjct: 9   WQGWPDLLRGALVTVEITACALALGCVLGLIVGIGRLNPKRRWIYSVCTAYV--AVIRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + +           F       + P F+   + L  Y+ A+++EIVR  + ++
Sbjct: 67  PLLVQLFILF-----------FGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ  AA +LG+T   A R ++LPQA+  +IPPL ++++ L+KNS+L   +   D++  
Sbjct: 116 DKGQTMAAQSLGMTPGVAMREIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHE 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  II+ + +++E+ L    +Y  L+  + L +     K+ 
Sbjct: 176 GQKIISVSYRSLEVYLAIALVYFVLTGTMTLVLRHFEQKLR 216



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 1/82 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEV 135
           + ++        +L G + T  +    +    ++G +VG GRL+   + +  +C  YV V
Sbjct: 3   LDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLIVGIGRLNPKRRWIYSVCTAYVAV 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157
            R  P LV +F L+  +     
Sbjct: 63  IRGTPLLVQLFILFFGLPHFGI 84


>gi|257481899|ref|ZP_05635940.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289624705|ref|ZP_06457659.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289650261|ref|ZP_06481604.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298485134|ref|ZP_07003230.1| Putative transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298160386|gb|EFI01411.1| Putative transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|330865666|gb|EGH00375.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330984783|gb|EGH82886.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009532|gb|EGH89588.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 222

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +  +Y+S F   G P LV + + Y   +  P L       G  + P 
Sbjct: 42  ALMRLSRLKLVNWIARIYVSFF--RGTPLLVQLFVIY---YGLPEL-------GIQLEP- 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +P
Sbjct: 89  LSAALIGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   
Sbjct: 149 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQ 208

Query: 386 NRLNAKIALKE 396
           N+L A++   +
Sbjct: 209 NKLEARVNRHD 219



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  KLV WI R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRLKLVNWIARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +       G  LN 
Sbjct: 76  YYGLPELGIQLEPLSAALIGFSLNM 100


>gi|153836333|ref|ZP_01989000.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|149750235|gb|EDM60980.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
          Length = 265

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 19/250 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+        +     +    +T++ +A    F+ VLG+V +L      
Sbjct: 34  MGYQWQWERVPDYIAFYEDDEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL----- 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K G  +   Y+   +I   P LV I L Y +             G       F +
Sbjct: 89  RLSDSKVGNVIGTTYVE--VIRNTPLLVQIYLLYFVF------------GPVIGLDRFST 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AEI R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT
Sbjct: 135 AVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL +    I+++T    EI      IYL+L++ ++     L
Sbjct: 195 NEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWL 254

Query: 389 NAKIALKEKK 398
             K+    +K
Sbjct: 255 EHKLGASWRK 264



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 12/131 (9%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           RV     Q +L + L  I +  V           L  G   +  +  +E     + +  D
Sbjct: 4   RVIKPVFQALLQMTLLFIAIVWV-----------LDSGADAMGYQWQWERVPDYIAFYED 52

Query: 83  SSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  A ++ G + T  ++   +    ++G +    RLS +K+   I   YVEV RN P 
Sbjct: 53  DEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALLRLSDSKVGNVIGTTYVEVIRNTPL 112

Query: 142 LVVIFFLYKSV 152
           LV I+ LY   
Sbjct: 113 LVQIYLLYFVF 123


>gi|111019224|ref|YP_702196.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110818754|gb|ABG94038.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 285

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 14/248 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P          F     L    +T+       +  F LG+VL++     SR  H    +
Sbjct: 15  NPGWDWATFAKYFTAGSVLQALWMTVKLTLWGTILGFALGVVLAV-----SRLSHNPVLQ 69

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKPVLGQFNFIGGSTVSPEFMSLY 270
            +  +YI  F    +P +V +   +        L    P    F     + V   F +  
Sbjct: 70  VIAWVYIWAF--RSIPLIVQLLFWFNITYLYQTLSLGIPFGPGFFTFEVNGVISGFTAAV 127

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ + AA+ AEI+RSG+I+V  GQ+EAA +LG+  R+    ++LPQAMR I+P   ++
Sbjct: 128 IGLALHQAAYSAEIIRSGIISVDHGQIEAAQSLGIPRRRQFFKIVLPQAMRGILPNAANE 187

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L K +S+   +  A+L      I  + G+ + ++++    Y+ L+ ++++    +  
Sbjct: 188 VISLFKGTSIVSTMAIAELFYQVQVIFGRNGRVVPLLMVATIWYIILTTLLSIGQYYVER 247

Query: 391 KIALKEKK 398
             A    +
Sbjct: 248 HYARGSAR 255



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L     T  L   G I    +G ++   RLS N ++  I  VY+  FR+IP +V + F +
Sbjct: 33  LQALWMTVKLTLWGTILGFALGVVLAVSRLSHNPVLQVIAWVYIWAFRSIPLIVQLLFWF 92

Query: 150 KSVLSVL 156
                  
Sbjct: 93  NITYLYQ 99


>gi|311279132|ref|YP_003941363.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308748327|gb|ADO48079.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 222

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +    LP+ +++ F I       LIA  + +++  P                  +  I L
Sbjct: 44  RMSPVLPVRWLARFYISIFRGTPLIAQLFMIYYGLPQF--------GIELDPIPAAMIGL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++
Sbjct: 96  SLNTAAYTSETLRAAISSIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFIS 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   N    ++ 
Sbjct: 156 LVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLN 215

Query: 394 LKEKK 398
            +E++
Sbjct: 216 RQERE 220



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G L+   R+S    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSVGGMFFGLLLGFLLALMRMSPVLPVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +       D       G+ LN
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLN 98


>gi|200390875|ref|ZP_03217486.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199603320|gb|EDZ01866.1| L-cystine transport system permease protein TcyB [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 222

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG VL+L                 P+L+++ F I   
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSP----------LWPVLWLARFYISIF 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
               LIA  + +++  P                  +  I LS  TAA+ +E +R+ + A+
Sbjct: 63  RGTPLIAQLFMIYYGLPQF--------GIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 175 AQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERE 220



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 43/101 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVLWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|302521884|ref|ZP_07274226.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
 gi|302430779|gb|EFL02595.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
          Length = 322

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 11/289 (3%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPL----VVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
             + +    V        E  R +P       V   +  + L+ L        + +G   
Sbjct: 14  VTKTAPPAPVRK--TAPAEAIRAVPVRHYGRWVAALVSLAALAALIYAFSQGKINWGAVP 71

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +          +     + V + V+GI   +    + R        ++   YI  F   G
Sbjct: 72  DYFFDDRILSGLGKTMLLTVVAMVIGIAGGVVL-AVMRLSKNPVTSSIAWFYIWFF--RG 128

Query: 232 LPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            P LV + + + L   F+   LG       S+     ++  + L    AA++AEI R+GL
Sbjct: 129 TPVLVQLMVWFNLGLVFEYINLGPLYKDYWSSFMTPLLTALLGLGLNEAAYMAEICRAGL 188

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AV  GQ EAA ALG++H KA R +++PQAMR I+PP  ++ +N+LK +SL  AV + +L
Sbjct: 189 LAVDEGQTEAAHALGMSHAKALRRIVIPQAMRVIVPPTGNEVINMLKTTSLVAAVQYPEL 248

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +     I   +G  +E++ +    YL L+ ++++    +    A    +
Sbjct: 249 LRAAQDIGQVSGAPVEMLFLAAAWYLILTSVLSIGQFYIERYYARGSSR 297



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     IL G   T  L    M+     G ++   RLS N + + 
Sbjct: 58  YAFSQGKINWGAVPDYFFDDRILSGLGKTMLLTVVAMVIGIAGGVVLAVMRLSKNPVTSS 117

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVL 153
           I   Y+  FR  P LV +   +   L
Sbjct: 118 IAWFYIWFFRGTPVLVQLMVWFNLGL 143


>gi|225175910|ref|ZP_03729902.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
 gi|225168498|gb|EEG77300.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
          Length = 225

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 111/235 (47%), Gaps = 15/235 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
             P+   +  +  S          +I     VLG++L L    L R    K   A    Y
Sbjct: 5   YFPYNFSVIPQFFSRFIFAAWMTMQITTLGIVLGLILGLVI-ALMRISPIKILNAPAKAY 63

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I    I G P L+ + + Y            N +        + +  IAL  + AA++AE
Sbjct: 64  IWA--IRGTPLLLQLLIIY------------NGMAPIMRIERYPAAVIALGIHNAAYLAE 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  + ++ RGQ EAA++LG+T  +A + ++LPQA +  +PPL +Q++  LK+SSLA  
Sbjct: 110 IFRGAIQSIDRGQREAAMSLGMTSWQAMKRIILPQAFKRAVPPLGNQFIIALKDSSLASV 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +L+S      +     +E+++I    YL ++ ++ + +N +  ++ + E +
Sbjct: 170 IAVPELLSRARQFGSSNFLYMEMLVIAGIYYLIMTSVLTVVVNHVEERLRVSEYR 224



 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 1/107 (0%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           FEI      ++    + +  +     T  +   G++   I+G ++   R+S  K++    
Sbjct: 2   FEI-YFPYNFSVIPQFFSRFIFAAWMTMQITTLGIVLGLILGLVIALMRISPIKILNAPA 60

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           + Y+   R  P L+ +  +Y  +  ++ I  +   +      N   L
Sbjct: 61  KAYIWAIRGTPLLLQLLIIYNGMAPIMRIERYPAAVIALGIHNAAYL 107


>gi|71738018|ref|YP_272644.1| cystine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558571|gb|AAZ37782.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|320322115|gb|EFW78211.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 222

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +  +Y+S F   G P LV + + Y                       
Sbjct: 42  ALMRLSRLKLVNWIARIYVSFF--RGTPLLVQLFVIYY-----------GLPEMGIQLEP 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +P
Sbjct: 89  LSAALIGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   
Sbjct: 149 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQ 208

Query: 386 NRLNAKIALKE 396
           N+L A++   +
Sbjct: 209 NKLEARVNRHD 219



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  KLV WI R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRLKLVNWIARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +       G  LN 
Sbjct: 76  YYGLPEMGIQLEPLSAALIGFSLNM 100


>gi|228950910|ref|ZP_04113032.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228808758|gb|EEM55255.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 251

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I       L      +   +    +      L    +T+       V   ++G++ + F 
Sbjct: 3   ILCGAFHSLLKSIQYEVKHMFEIFISTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF- 61

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  + K   ++  +YI   +I G P +V IA+ Y              I    V  
Sbjct: 62  ----RISNNKVLNSIAHIYI--AIIRGTPLIVQIAILY------------FGITSVIVFS 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +
Sbjct: 104 PFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F
Sbjct: 164 PPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGVYYLVLVLLFTYF 223

Query: 385 MNRLNAKIALKE 396
           +N L  ++  KE
Sbjct: 224 VNLLEKRLQRKE 235



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  +Y+ + R  P +V I  L
Sbjct: 33  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHIYIAIIRGTPLIVQIAIL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 93  YFGITSVIVFSPFWAGAIALAIHNGAYI 120


>gi|239627922|ref|ZP_04670953.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47_FAA]
 gi|239518068|gb|EEQ57934.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47FAA]
          Length = 230

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 115/235 (48%), Gaps = 16/235 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLL 222
            +  F++     + T  + T   I +F+ ++GIVL      + R  +EKT K      + 
Sbjct: 9   FYLNFVSENRWKYLTDGLKTTLIITLFACLMGIVLGFIVG-MIRSTYEKTHKLKLLNAIC 67

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +   +I G P +V + + Y + F            GS    + +   +A    + A++A
Sbjct: 68  KVYLTVIRGTPVIVQLLIIYFVLF------------GSVRIDKVLVAILAFGINSGAYVA 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG++++  GQMEA  +LG  + +    +++PQA ++++P L +++++LLK +S+A 
Sbjct: 116 EIFRSGIMSIDAGQMEAGRSLGFNYAQTMWYIIMPQAFKTVLPTLCNEFISLLKETSVAG 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   DL   G  I ++T  A   ++    IYL + ++    +  L  ++   E+
Sbjct: 176 YIAIQDLTKGGDIIRSRTYSAFMPLIAVALIYLIIVMIFTKLIQILERRLRQNER 230



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVFRNIP 140
              +  G   T  +     +   ++G +VG  R         KL+  IC+VY+ V R  P
Sbjct: 19  WKYLTDGLKTTLIITLFACLMGIVLGFIVGMIRSTYEKTHKLKLLNAICKVYLTVIRGTP 78

Query: 141 PLVVIFFLYKSVL 153
            +V +  +Y  + 
Sbjct: 79  VIVQLLIIYFVLF 91


>gi|307244562|ref|ZP_07526667.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306492089|gb|EFM64137.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 224

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 120/231 (51%), Gaps = 7/231 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               F+N+  LS+      T    F  + + G ++ L A  + +  ++   K +  +YI 
Sbjct: 1   MDFSFINDYYLSYIQGAGVTILISF-MALLFGFIVGLVAC-VCKISNKSVLKWIANVYIE 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I   P LV + +   + +  P++    +         F +  +A+   + A+IAEI+
Sbjct: 59  --VIRDTPLLVQVMI---MAYGFPMILGVKYPTMFGYDDTFTAAVMAMILNSGAYIAEIL 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ +V +GQMEA+ +LGLT+ ++ R +++PQA+++I+P L +++++L+K S++   VG
Sbjct: 114 RSGISSVDKGQMEASRSLGLTYLQSMRYIIVPQAVKNILPALANEFISLVKESAIVAFVG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             D++ V  ++ N T       L    IY  ++  ++  +  L  K+ ++ 
Sbjct: 174 VTDIMFVAISVKNSTYNGFGPYLFAALIYFVITFTLSKLVGLLEKKMTVER 224



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 43/95 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  + Y  + + G   T  ++F  ++   I+G +    ++S   ++ WI  VY+EV 
Sbjct: 1   MDFSFINDYYLSYIQGAGVTILISFMALLFGFIVGLVACVCKISNKSVLKWIANVYIEVI 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           R+ P LV +  +      +L +   ++      F 
Sbjct: 61  RDTPLLVQVMIMAYGFPMILGVKYPTMFGYDDTFT 95


>gi|167756843|ref|ZP_02428970.1| hypothetical protein CLORAM_02392 [Clostridium ramosum DSM 1402]
 gi|167703018|gb|EDS17597.1| hypothetical protein CLORAM_02392 [Clostridium ramosum DSM 1402]
          Length = 226

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 113/227 (49%), Gaps = 7/227 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L F       +  +   +   G++L +     ++    K  + +  +Y+   LI
Sbjct: 7   FCTADNLIFLLQGAGKSLLLAACALFFGLILGVLGAA-AKISKHKILRLIGNVYVE--LI 63

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ I     L+   P+L + +  G   +   ++   IA+S  + A+  E++RSG+
Sbjct: 64  RGTPMLLQILF---LYIAFPLLMR-SITGERFIPDPYVCGAIAMSINSGAYSTELIRSGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           + V +GQ EA   LGL + +  +L++LPQA + IIPP+ S+++ L+K+SSL   +G  +L
Sbjct: 120 MGVDKGQWEACEVLGLNYTQTMKLIILPQAFKRIIPPIVSEFITLIKDSSLISVLGATEL 179

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     +   T   I  +L    +YL +++  + F  ++  ++++ +
Sbjct: 180 LYSAQILGANTFNLIPPLLASAVLYLIMTLTTSYFARKIERRLSVSD 226



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 38/79 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  LA   +    I+G L  A ++S +K++  I  VYVE+ R  P L+ I FL
Sbjct: 16  LLQGAGKSLLLAACALFFGLILGVLGAAAKISKHKILRLIGNVYVELIRGTPMLLQILFL 75

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           Y +   ++        +P 
Sbjct: 76  YIAFPLLMRSITGERFIPD 94


>gi|310640333|ref|YP_003945091.1| inner membrane amino-acid abc transporter permease protein yecs
           [Paenibacillus polymyxa SC2]
 gi|309245283|gb|ADO54850.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Paenibacillus polymyxa SC2]
          Length = 215

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 14/226 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           + L    + F          I + S + G+++ L    ++R    +  + L  +Y+S  +
Sbjct: 2   LELMWENVPFLLKGAYYTLYITIVSMLFGLIIGLIV-AVARLKGNRPVRWLARMYVS--I 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV IA+ Y                         +  +ALS  T A+++E  R  
Sbjct: 59  IRGTPVLVQIAVIYY-----------GLDDYGISFGSLTAACLALSINTGAYLSETFRGA 107

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AVP+GQ EAA A G++  +    ++LPQA+R  I P+ + ++ +LK +SL   +G ++
Sbjct: 108 ILAVPQGQTEAAYATGMSPGQTMWRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSE 167

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L+     +  Q    +  +L    +Y  +SI  +  + R+  ++A 
Sbjct: 168 LMRQAQLLQAQYLLYMPFLLEIALMYWIMSIGFSAILERVEKRLAR 213



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 33/64 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T ++    M+   IIG +V   RL  N+ V W+ R+YV + R  P LV I  +
Sbjct: 12  LLKGAYYTLYITIVSMLFGLIIGLIVAVARLKGNRPVRWLARMYVSIIRGTPVLVQIAVI 71

Query: 149 YKSV 152
           Y  +
Sbjct: 72  YYGL 75


>gi|225025180|ref|ZP_03714372.1| hypothetical protein EIKCOROL_02074 [Eikenella corrodens ATCC
           23834]
 gi|224942039|gb|EEG23248.1| hypothetical protein EIKCOROL_02074 [Eikenella corrodens ATCC
           23834]
          Length = 259

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 11/233 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS----T 226
                      T+   A    F  +LG+  +L         +  T   L LL        
Sbjct: 21  YRQMFFFGVLATIGIAAAATFFGMILGLCNALIRVIRIEKGNIVTKGLLWLLQQCSRLYV 80

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEFMSLYIALSCYTAA 279
            L  G P LV I + + +     V  Q          +         ++  +ALS  + A
Sbjct: 81  TLFRGTPMLVQIFIWHNVWSPLLVHQQNGLLISGDLAVYLRQNYAPLVAGVLALSFNSGA 140

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I E+ RSG+ ++ RGQMEAA +LGL++ +A R ++LPQ +R ++ PL ++++ LLK+SS
Sbjct: 141 YITEVFRSGIKSIDRGQMEAARSLGLSYGQAMRYIILPQTLRRMLGPLGNEFITLLKDSS 200

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +  A+L  V  +   +     E       +YL L++ +A F  RL  K 
Sbjct: 201 LLATIAVAELTYVAKSAAGRYYVYEEPYYFIALVYLMLTMALAWFFARLEKKY 253


>gi|89902568|ref|YP_525039.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89347305|gb|ABD71508.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 255

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 10/257 (3%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLS 208
              +         I+  + +           +T+    +       +G+  L+      +
Sbjct: 1   MEQVLWFGWFRADIIAEYAVLFWRGLQMTMLVTLICIVQGTALGLAIGMARLAEARHAPA 60

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-------YQLHFDKPVLGQFNFIGGST 261
           R   +   +    +Y+S F   G P  V I L        +    D  ++          
Sbjct: 61  RQLCKFALRWPATVYVSFF--RGTPLFVQILLIHFAVLPLFINPADGLLISGETARNLKQ 118

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F+S  IAL+    A+I+EI R+G+ ++ RGQ+EA+ +LGL+  +    V+LPQA R
Sbjct: 119 NYGAFLSGVIALTLNAGAYISEIFRAGIQSIDRGQVEASRSLGLSFPRTMFHVVLPQAFR 178

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++PPL +  ++LLK+SSL  A+G A+L     T+     +  E  L    +Y  L++ +
Sbjct: 179 RMLPPLGNNAISLLKDSSLISAIGLAELAYAARTVAGAYSRYWEPYLTISLMYWVLTLGL 238

Query: 382 ALFMNRLNAKIALKEKK 398
           A  +  L A+    + +
Sbjct: 239 AYVVKNLEARYGRGDTR 255



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 10/121 (8%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVE 134
           YA     G   T  +    ++  T +G  +G  RL+  +           + W   VYV 
Sbjct: 18  YAVLFWRGLQMTMLVTLICIVQGTALGLAIGMARLAEARHAPARQLCKFALRWPATVYVS 77

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR  P  V I  ++ +VL +   P   +++      N +      L+      +   ++
Sbjct: 78  FFRGTPLFVQILLIHFAVLPLFINPADGLLISGETARNLKQNYGAFLSGVIALTLNAGAY 137

Query: 195 V 195
           +
Sbjct: 138 I 138


>gi|308067558|ref|YP_003869163.1| Hypothetical amino-acid ABC transporter permease protein
           [Paenibacillus polymyxa E681]
 gi|305856837|gb|ADM68625.1| Hypothetical amino-acid ABC transporter permease protein
           [Paenibacillus polymyxa E681]
          Length = 215

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 14/226 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           + L    + F          I + S   G+++ L    ++R    +  + L  +Y+S  +
Sbjct: 2   LELMWENVPFLLKGAYYTLYITIVSMFFGLIIGLVV-AVARLKGNRPVRWLARMYVS--I 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV IA+ Y                         +  +ALS  T A+++E  R  
Sbjct: 59  IRGTPVLVQIAVIYY-----------GLDDYGISFGSLTAACLALSINTGAYLSETFRGA 107

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AVP+GQ EAA A G++  +    ++LPQA+R  I P+ + ++ +LK +SL   +G ++
Sbjct: 108 ILAVPQGQTEAAYATGMSPGQTMWRIILPQAVRIAIAPMGNTFVGMLKETSLVSVIGVSE 167

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L+     +  Q    +  +L    +Y  +SI  +  + R+  ++A 
Sbjct: 168 LMRQAQLLQAQYLLYMPFLLEIGLMYWIMSIGFSAILERVEKRLAR 213



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T ++    M    IIG +V   RL  N+ V W+ R+YV + R  P LV I  +
Sbjct: 12  LLKGAYYTLYITIVSMFFGLIIGLVVAVARLKGNRPVRWLARMYVSIIRGTPVLVQIAVI 71

Query: 149 YKSV 152
           Y  +
Sbjct: 72  YYGL 75


>gi|328477583|gb|EGF47645.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus MTCC 5462]
          Length = 486

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 17/221 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               ++    TM        F+  +GI++ L           +  + +   +I  F   G
Sbjct: 281 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLG-----VLPNRFARGVATTFIYIF--RG 333

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP LVL    Y      P L         +  P F++  I L+    A+ A  V+ G+ A
Sbjct: 334 LPLLVLALFIYT---GVPSLIG-------SKIPAFVAGIITLTLNEGAYTAAFVKGGIQA 383

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 384 VDVGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGILELTQ 443

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  +  +I  +   IYL +  ++    N +  ++
Sbjct: 444 TGKIIIARNMEGFKIWTMVALIYLIIITVLTWLSNWVQQRM 484



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +    +  AT +G LVG   +  N+    +   ++ +FR +P LV+ 
Sbjct: 281 WGTLMNGLRETMVVTIVAIFFATAVGILVGLLGVLPNRFARGVATTFIYIFRGLPLLVLA 340

Query: 146 FFLYKSVLSVLPIPDHSIV 164
            F+Y  V S++     + V
Sbjct: 341 LFIYTGVPSLIGSKIPAFV 359


>gi|229587810|ref|YP_002869929.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229359676|emb|CAY46524.1| putative ABC transport system, permease [Pseudomonas fluorescens
           SBW25]
          Length = 221

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 18/232 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
               +      L     T+  +     F  VLG  L+L      R    K    +  +Y+
Sbjct: 5   FQLALDSAPFLLKGAYYTVILSLGGMFFGLVLGFGLALM-----RLSRFKLVSWIARVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV + L Y                         +  I  S   AA+  EI
Sbjct: 60  SFF--RGTPLLVQLFLIYY-----------GLPQVGIELDPIPAAMIGFSLNMAAYACEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ + ++ RGQ EAA ++G+T  +  R  +LPQAMR+ +PPL + +++L+K+++LA  +
Sbjct: 107 LRAAIASIERGQWEAAASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L      +  +T +   + L    IY  L+ ++A   NRL  ++   +
Sbjct: 167 QVPELFRQAQLVSARTFEIFTMYLSAALIYWILASILAHLQNRLEDRVNRHD 218



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 9/107 (8%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            AGF++     P+         +L G   T  L+  GM    ++G  +   RLS  KLV+
Sbjct: 2   EAGFQLALDSAPF---------LLKGAYYTVILSLGGMFFGLVLGFGLALMRLSRFKLVS 52

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           WI RVYV  FR  P LV +F +Y  +  V    D       G  LN 
Sbjct: 53  WIARVYVSFFRGTPLLVQLFLIYYGLPQVGIELDPIPAAMIGFSLNM 99


>gi|297619594|ref|YP_003707699.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus voltae A3]
 gi|297378571|gb|ADI36726.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus voltae A3]
          Length = 232

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 14/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              KI VFS +LGIVL +F   + R       ++   +YI   LI G P LV I + Y  
Sbjct: 33  MTLKITVFSIILGIVLGVFVG-VGRISSNFIYRSFSSVYIE--LIRGTPMLVQIMIIY-- 87

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F++  +AL   + A+I EI+++G+++V  GQMEAA +LG
Sbjct: 88  ---------FGLPDLGINLDAFLAGVLALGLNSGAYIGEIIKAGILSVHHGQMEAARSLG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + + +A R ++LPQA R+++P L ++++ LLK+SSL   +   +L+ VG  +   T  A 
Sbjct: 139 MNYFQAMRHIILPQAFRNVLPALGNEFIILLKDSSLLSVIAIVELLRVGDQVRGSTYNAW 198

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L     YL ++I ++  +  +  +  +  
Sbjct: 199 TPLLGVALFYLLMTIPLSRLVLYIEKRWKIDR 230



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +    +I   ++G  VG GR+S+N +      VY+E+ R  P LV I  +
Sbjct: 27  LFEGALMTLKITVFSIILGIVLGVFVGVGRISSNFIYRSFSSVYIELIRGTPMLVQIMII 86

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 87  YFGLPDLGIN 96


>gi|167461579|ref|ZP_02326668.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 217

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 14/220 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         +  F+ + G +L +F   L R    K  K +   YI    + G P 
Sbjct: 11  YWPMFLKGAGYTLVLAFFTVICGTILGIFIC-LMRISKIKIVKGIAAAYIEF--LRGTPL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + + Y           F         P  +S   AL+  +AA++AEI R+G+ ++ +
Sbjct: 68  LVQLYIIY-----------FALPQFGISLPGMVSGIAALTLNSAAYVAEIFRAGIESIDK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LG+TH  A +L+++PQA+R+I+P L ++++ ++K SS+   VG  DL+    
Sbjct: 117 GQMEAARSLGMTHNMAMKLIIIPQAIRNILPALGNEFIVIIKESSIVSIVGITDLMFNAD 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           T+   T +A E +++   +Y  ++  ++  + +   +I  
Sbjct: 177 TVRGVTYKAFEPLIVAAVVYFIMTFTLSKLLGKFERRIKR 216



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 39/81 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  ++Y    L G   T  LAF  +I  TI+G  +   R+S  K+V  I   Y+E  
Sbjct: 3   LDFSFLATYWPMFLKGAGYTLVLAFFTVICGTILGIFICLMRISKIKIVKGIAAAYIEFL 62

Query: 137 RNIPPLVVIFFLYKSVLSVLP 157
           R  P LV ++ +Y ++     
Sbjct: 63  RGTPLLVQLYIIYFALPQFGI 83


>gi|315650536|ref|ZP_07903602.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315487191|gb|EFU77507.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 230

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 16/231 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY---IST 226
           F+ +         +    K+  F+ +LG VL  F+  + R  +E T K   L +   +  
Sbjct: 13  FITDDRWMSLLRGLAVTLKVTFFAVILGFVLG-FSVAIVRDVYENTKKLKVLNFLCNVYL 71

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V + + Y + F             S    + ++  +A    + A+ AEI R
Sbjct: 72  TVIRGTPVVVQLLIIYFVIFS------------SIKIDKSIAAVLAFGINSGAYQAEIFR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ ++P+GQMEA  +LG  +R+    +++PQA+++++P L ++++ L+K +S+A  +  
Sbjct: 120 SGINSIPKGQMEAGRSLGFNYRQTMVNIIMPQAIKNVLPTLGNEFIVLMKETSVAGYIAL 179

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL   G  I ++T  A+   L    +YL + +  +  +     ++A   +
Sbjct: 180 EDLTKAGDIIRSRTYSAMMPFLAVALLYLIMVMFFSHLLKMFERRLAGSGR 230



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAW 127
            Q I+ + +D  + + +L G   T  + F  +I   ++G  V   R         K++ +
Sbjct: 7   AQFILNFITDDRWMS-LLRGLAVTLKVTFFAVILGFVLGFSVAIVRDVYENTKKLKVLNF 65

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +C VY+ V R  P +V +  +Y  + S + 
Sbjct: 66  LCNVYLTVIRGTPVVVQLLIIYFVIFSSIK 95


>gi|167749245|ref|ZP_02421372.1| hypothetical protein EUBSIR_00196 [Eubacterium siraeum DSM 15702]
 gi|167657774|gb|EDS01904.1| hypothetical protein EUBSIR_00196 [Eubacterium siraeum DSM 15702]
          Length = 233

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 105/227 (46%), Gaps = 14/227 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS    T+  +    +  F++G  +++     +          +  LY+  F+I G
Sbjct: 21  YEFYLSGIGNTLLISLFAVILGFLIGAFVAVVKQLCAGRRGIGWIAKICDLYV--FVIRG 78

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV + L   + F+               +   ++  +     + A++AEIVR+G+ +
Sbjct: 79  TPVLVQLLLINAVLFNY------------RGANAIVAAVLCFGINSGAYVAEIVRAGIES 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EA  +LGL   +   L++LPQA+++I+P L ++++ L+K +S+A  +   D+  
Sbjct: 127 IDKGQTEAGRSLGLGAGQTMWLIVLPQAIKNILPALGNEFIVLVKETSIAGYIAVTDITK 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               + ++T   I  +LI    YL L  ++      L  ++   +++
Sbjct: 187 AAQYVGSKTYDLITPLLIAAAFYLILVFILTKLQKLLERRLGKSDRR 233



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 7/72 (9%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGA------GRLSANKLVAWICRVYVEVFRNIPPL 142
            L G  NT  ++   +I   +IG  V        GR      +A IC +YV V R  P L
Sbjct: 24  YLSGIGNTLLISLFAVILGFLIGAFVAVVKQLCAGRRGIGW-IAKICDLYVFVIRGTPVL 82

Query: 143 VVIFFLYKSVLS 154
           V +  +   + +
Sbjct: 83  VQLLLINAVLFN 94


>gi|317122403|ref|YP_004102406.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermaerobacter marianensis DSM 12885]
 gi|315592383|gb|ADU51679.1| amino acid ABC transporter membrane protein, PAAT family
           [Thermaerobacter marianensis DSM 12885]
          Length = 225

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L +    +  + +   Y  T++I G P LV I + Y           F  +    V   
Sbjct: 48  ALMKLSRVEILRRVGSFY--TWIIRGTPLLVQIYIIY-----------FGLVQYGVVLDP 94

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IAL+  + A++AEI+R+G+ ++P+GQMEAA +LG+++ +A R V+LPQA R +IP
Sbjct: 95  FPAAVIALTVNSGAYLAEIIRAGIESIPKGQMEAARSLGMSYGQAMRRVILPQAYRRMIP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+ ++++ LLK+SSL   +   +L+     + N T + +       F YL ++ +     
Sbjct: 155 PMVNEFVTLLKDSSLVSIISMEELMLYSRQLANATARGMWFFGYAAFYYLVMTTLFTTLG 214

Query: 386 NRLNAKIALKE 396
           + L  K+   E
Sbjct: 215 SWLERKLKDYE 225


>gi|302546543|ref|ZP_07298885.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302464161|gb|EFL27254.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces himastatinicus ATCC 53653]
          Length = 305

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +        + +    ++  P     +    F     L    +T+          F 
Sbjct: 43  WRWVAVAATAVLVAQFAHGLITNPGWEWEVFADFFATETILKAVWITLQLTFYGTALGFA 102

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDK 248
           LGIVL+       R       K++   YI  F    +P +V +   + L        F  
Sbjct: 103 LGIVLAFM-----RLSRSPFLKSVAFTYIWAF--RSIPLIVQLLFWFNLTYLYKKLDFGI 155

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F     + +     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   
Sbjct: 156 PFGPGFFSFDTAGLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVDTGQLEAAAALGIPRL 215

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      I  + G+ + +++
Sbjct: 216 RQLRRIVLPQAMRSILPNAANEVISLFKGTSIVSVMAIGELFYQTQVIYGRNGRVVPLLM 275

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+ ++++    +    +    +
Sbjct: 276 VATVWYIILTTLLSIAQYYVERHFSRGATR 305



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 44/143 (30%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  L F G      +G ++   RLS +  +  +   Y+  FR+IP +V + F 
Sbjct: 82  ILKAVWITLQLTFYGTALGFALGIVLAFMRLSRSPFLKSVAFTYIWAFRSIPLIVQLLFW 141

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +        +       P     +  GL            +   ++   IV        +
Sbjct: 142 FNLTYLYKKLDFGIPFGPGFFSFDTAGLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVDT 201

Query: 209 RHFHEKTGKALPLLYISTFLIFG 231
                     +P L     ++  
Sbjct: 202 GQLEAAAALGIPRLRQLRRIVLP 224


>gi|153833012|ref|ZP_01985679.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01]
 gi|148870733|gb|EDL69639.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01]
          Length = 265

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 19/277 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             ++  + ++ + +   +  L               +PD+      G +     +    +
Sbjct: 7   KPVLQALLQIAILLIAIVWVLDSGAQAMGYQWQWERVPDYIAFYEDGEWWPAELIEGLIV 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A    F+ V+G+V +L      R  + K G A+   Y+   LI   P LV I L 
Sbjct: 67  TLKISAISLFFTLVIGLVTALL-----RLSNSKVGNAIGTTYVE--LIRNTPLLVQIYLL 119

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +ALS +  A+ AEI R+GL ++P+GQ EAA 
Sbjct: 120 YFVF------------GPVIGLDRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAK 167

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+   A + V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T 
Sbjct: 168 SLGLSPLFAYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEARNIVSETA 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              EI      IYL+L++ ++     L  K+    +K
Sbjct: 228 MPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWRK 264



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 77  VPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           + +  D  +  A ++ G + T  ++   +    +IG +    RLS +K+   I   YVE+
Sbjct: 47  IAFYEDGEWWPAELIEGLIVTLKISAISLFFTLVIGLVTALLRLSNSKVGNAIGTTYVEL 106

Query: 136 FRNIPPLVVIFFLYKSV 152
            RN P LV I+ LY   
Sbjct: 107 IRNTPLLVQIYLLYFVF 123


>gi|37528306|ref|NP_931651.1| hypothetical protein plu4485 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787744|emb|CAE16857.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 233

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 14/221 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         + + +F LGI+L  F   L R +  K   A+   Y+  +LI G P 
Sbjct: 13  FWPMLYAGFAFTIPLTLITFTLGIILG-FIVALIRLYGPKPLIAVAKFYV--WLIRGTPL 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +                       F S  I  +    A+ +EI+R+ L++VP+
Sbjct: 70  LVQLFLIFY-----------ALPSVGITLGAFTSAVIGFTLNIGAYTSEIIRATLLSVPK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G++  ++ R ++LPQA R  IPPL++ +++L+K++SLA  +   +L     
Sbjct: 119 GQWEAAYSIGMSWTQSLRRIILPQAARIAIPPLSNTFISLVKDTSLASVITVPELFLAAQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            I   T Q + +      +YL +S +++    RL  K + K
Sbjct: 179 RIAAVTYQPLILYTEAAILYLIISSVLSSLQTRLEKKFSQK 219



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  GF  T  L         I+G +V   RL   K +  + + YV + R  P L
Sbjct: 11  DSFWPMLYAGFAFTIPLTLITFTLGIILGFIVALIRLYGPKPLIAVAKFYVWLIRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++ ++ SV            G  LN
Sbjct: 71  VQLFLIFYALPSVGITLGAFTSAVIGFTLN 100


>gi|51245835|ref|YP_065719.1| glutamine ABC-transporter, permease protein (GlnP) [Desulfotalea
           psychrophila LSv54]
 gi|50876872|emb|CAG36712.1| probable glutamine ABC-transporter, permease protein (GlnP)
           [Desulfotalea psychrophila LSv54]
          Length = 222

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+       VF FVLG+V  L      +       + +   YI T  I G P L
Sbjct: 18  LGGAKLTVYLTVGGLVFGFVLGVVFGLM-----KLSTLWPVRKIAGFYIET--IRGTPML 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V       L+F  P+   F         P   +  I ++  + A+IAEIVR  + ++  G
Sbjct: 71  VQAMF---LYFGLPMAFGFRL-------PALAAGVIVIAINSGAYIAEIVRGAVQSIDSG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEA  ++GLT  +A R V+ PQA R +IPPL +Q++  LK++SL + +G  +L+     
Sbjct: 121 QMEAGRSIGLTSLQAMRYVIWPQAFRRMIPPLGNQFIISLKDTSLLMIIGVGELLRTADE 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I+    +A E+ L    IYL++++ IA  +  +  ++ ++ +
Sbjct: 181 IVAVNFRAFEVYLACGLIYLAMTMSIARVLKIVEKRLQIQGR 222



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L   G++   ++G + G  +LS    V  I   Y+E  R  P LV   FL
Sbjct: 17  LLGGAKLTVYLTVGGLVFGFVLGVVFGLMKLSTLWPVRKIAGFYIETIRGTPMLVQAMFL 76

Query: 149 YKSVLSVLPI 158
           Y  +      
Sbjct: 77  YFGLPMAFGF 86


>gi|258405468|ref|YP_003198210.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257797695|gb|ACV68632.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 267

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 15/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L F    +    ++ + +  L +V+ L A  L R             Y+   ++
Sbjct: 55  DPYLDILKFVPDGILVTFEVTMLAIFLSLVVGLIAG-LGRISRIPIVNLTASTYVE--VV 111

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV +   Y              +G     P F +  IA++    A++ EI R+G+
Sbjct: 112 RGIPLLVQLFYIYY------------ALGSFMQVPPFFAAIIAMTVCYGAYMGEIFRAGI 159

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++  GQ EAA +LG +  +    V++PQAMR+I+PP+ ++++ LLK++SL   +  +DL
Sbjct: 160 ESIDYGQTEAARSLGFSRGQTMFYVIIPQAMRTILPPVGNEFIALLKDTSLVSIIAVSDL 219

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  G     ++    E   +   +YL +++ ++  ++ + AK+   +K
Sbjct: 220 LRRGREFATESFDYFETYTMVALLYLLITLFLSKIVSIMEAKLTPNDK 267



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF +    +  + ++G + G GR+S   +V      YVEV R IP LV +F++Y +
Sbjct: 67  GILVTFEVTMLAIFLSLVVGLIAGLGRISRIPIVNLTASTYVEVVRGIPLLVQLFYIYYA 126

Query: 152 VLSVLPIPDHS 162
           + S + +P   
Sbjct: 127 LGSFMQVPPFF 137


>gi|18309583|ref|NP_561517.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|18144260|dbj|BAB80307.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
          Length = 223

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F        L     T+  +A   +   +LG +L          F  K  + +   Y+
Sbjct: 6   FSFLKEYFPVFLEGAKWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTAYV 65

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P L+ I + Y           F            +S  IA+S  +AA+++EI
Sbjct: 66  E--VIRGTPLLLQIYIVY-----------FGLPSFGIQLEVLLSCIIAISLNSAAYVSEI 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ+EAA +LG+T   A RL++LPQA+++I+P + ++++ ++K SS+A  +
Sbjct: 113 IRAGIDAVDKGQLEAARSLGMTEGMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTI 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G A+L+     +   T +  E +++    Y  ++  +   M+ +  +++  
Sbjct: 173 GVAELMYSSKIVTGATYKGFEPLIVIAMFYFVMTFSLGRVMSYVEKRLSKS 223



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRV 131
           + ++    Y    L G   T  ++   +I   ++GT++   + S       K++  I   
Sbjct: 4   LDFSFLKEYFPVFLEGAKWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTA 63

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           YVEV R  P L+ I+ +Y  + S    
Sbjct: 64  YVEVIRGTPLLLQIYIVYFGLPSFGIQ 90


>gi|310658910|ref|YP_003936631.1| ABC transporter permease [Clostridium sticklandii DSM 519]
 gi|308825688|emb|CBH21726.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Clostridium sticklandii]
          Length = 212

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 22/234 (9%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F +      +S  + T+  +    +   + GIVLS+      +     +G  +   
Sbjct: 1   MDFGFLVDYYKFFISGTSNTLMLSFITVILGLIGGIVLSIMKLSKFKILQNISGAYIA-- 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                 I G P LV + + Y                G    P F++  IA+S  ++A+IA
Sbjct: 59  -----FIRGTPLLVQLYIVYY---------------GLKDIPMFVAGVIAMSINSSAYIA 98

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G++AV +GQ EA  +LG+T   A + V+LPQA ++I+P L ++++ L+K S++  
Sbjct: 99  EIIRAGIMAVDKGQFEATKSLGMTGAMAYKEVILPQAFKNILPALGNEFIVLIKESAIVS 158

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G  DL+    TI   T +  E +L+   IY  L+ +++     +  ++   +
Sbjct: 159 VIGLHDLMYNVDTIRGITYKPFEPLLVAALIYFILTAVLSKGFGVIERRLQASD 212



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G  NT  L+F  +I   I G ++   +LS  K++  I   Y+   R  P LV 
Sbjct: 9   YYKFFISGTSNTLMLSFITVILGLIGGIVLSIMKLSKFKILQNISGAYIAFIRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPI 158
           ++ +Y  +  +   
Sbjct: 69  LYIVYYGLKDIPMF 82


>gi|169342343|ref|ZP_02863411.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens C str. JGS1495]
 gi|169299568|gb|EDS81631.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens C str. JGS1495]
          Length = 223

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F        L     T+  +A   +   +LG +L          F  K  + +   Y+
Sbjct: 6   FSFLKEYFPVFLEGAKWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTAYV 65

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P L+ I + Y           F             S  IA+S  +AA+++EI
Sbjct: 66  E--VIRGTPLLLQIYIVY-----------FGLPSFGIQLEVLPSCIIAISLNSAAYVSEI 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ+EAA +LG+T R A RL++LPQA+++I+P + ++++ ++K SS+A  +
Sbjct: 113 IRAGIDAVDKGQLEAARSLGMTERMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTI 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G A+L+     +   T +  E +++    Y  ++  +   M+ +  +++  
Sbjct: 173 GVAELMYSSKIVTGATYKGFEPLIVIAMFYFVMTFSLGRAMSYVEKRLSKS 223



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRV 131
           + ++    Y    L G   T  ++   +I   ++GT++   + S       K++  I   
Sbjct: 4   LDFSFLKEYFPVFLEGAKWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTA 63

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           YVEV R  P L+ I+ +Y  + S    
Sbjct: 64  YVEVIRGTPLLLQIYIVYFGLPSFGIQ 90


>gi|255284289|ref|ZP_05348844.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Bryantella formatexigens DSM 14469]
 gi|255265183|gb|EET58388.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Bryantella formatexigens DSM 14469]
          Length = 223

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 119/227 (52%), Gaps = 11/227 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+       +F+ ++G++++LF            GK   L  I T  + 
Sbjct: 8   YGVMLLKSMGNTLLLCVLSLLFAMIIGLIVALFN----------VGKNRVLNLIGTIFVD 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  + LI L Y ++F  P   +   + G  +     +  IALS    A++AEI+R+G+ 
Sbjct: 58  AVRGVPLIVLAYFVYFGVPQAAKMMNVSGFRL-SALTAGIIALSMNCGAYMAEIIRAGIE 116

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEA+ +LGL++ K+ RL+++PQA+R++IP + +Q++  LK++S+   +GF +LV
Sbjct: 117 SVDKGQMEASRSLGLSYGKSMRLIIIPQAIRTMIPSIINQFIITLKDTSILSVIGFPELV 176

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    +   T   +++  I   +Y+ + I ++    R+  ++   ++
Sbjct: 177 NTAKNVAGNTFMNLQVWAIVGVMYMVVIITLSKVAKRVERRLKRGQQ 223



 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 37/76 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L    NT  L    ++ A IIG +V    +  N+++  I  ++V+  R +P +V+
Sbjct: 8   YGVMLLKSMGNTLLLCVLSLLFAMIIGLIVALFNVGKNRVLNLIGTIFVDAVRGVPLIVL 67

Query: 145 IFFLYKSVLSVLPIPD 160
            +F+Y  V     + +
Sbjct: 68  AYFVYFGVPQAAKMMN 83


>gi|111017823|ref|YP_700795.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110817353|gb|ABG92637.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 311

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 15/268 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R    L ++        +V         +          L    LT+            
Sbjct: 33  VRQTFGLALLIVAVAVTWNVATNDRFHWTVVSSYLFAPEILRGVVLTIILTIVSMTAGIS 92

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG +L++      R        ++   YI  F   G P LV +   Y +    P +    
Sbjct: 93  LGTLLAVM-----RLSDNPIVNSISRGYIWFF--RGTPLLVQLIFWYNIAALYPTISIGI 145

Query: 256 FIGGSTVSPEFMSLYIA--------LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             GG       ++  I         LS   AA++AEI+R G+ +V  GQ +AA ALG+  
Sbjct: 146 PFGGPEFMIGSVNTLITPLGAALLGLSLNEAAYMAEIIRGGIGSVDNGQYDAAQALGMNK 205

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+LPQAMR ++PP  +Q +++LK ++L   +  +DL+     I +   Q I ++
Sbjct: 206 TQLMRRVILPQAMRVVLPPTGNQVISMLKGTTLVSVLAISDLLYSAQIIYSLNYQTIPLL 265

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++    YL ++ +++ F ++L    A  
Sbjct: 266 IVASLWYLLMTTILSFFQDKLEKHYARG 293



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 78  PYTSDSSYATA--ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            +T  SSY  A  IL G V T  L    M     +GTL+   RLS N +V  I R Y+  
Sbjct: 59  HWTVVSSYLFAPEILRGVVLTIILTIVSMTAGISLGTLLAVMRLSDNPIVNSISRGYIWF 118

Query: 136 FRNIPPLVVIFFLYKS 151
           FR  P LV + F Y  
Sbjct: 119 FRGTPLLVQLIFWYNI 134


>gi|293374469|ref|ZP_06620791.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292646848|gb|EFF64836.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 228

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 114/230 (49%), Gaps = 6/230 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F +      L    +T+        F  ++GI++SL     ++    K    L   
Sbjct: 1   MSFEFLVDYYPMLLKGTGVTIALALITVFFGTLIGILVSLTKFN-AKGMLGKVLSKLADA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++ F   G P ++ + +   L F  P L    +     +S EF+   IAL+  + A+++
Sbjct: 60  YVAFF--RGTPLMIQLFI---LWFGVPQLLHTRYPSFGWISAEFLVGAIALAINSGAYVS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+G+ AV +GQ EA  +LGL+ ++  + V+LPQA+++I+P L ++++ ++K S++  
Sbjct: 115 EIFRAGIQAVDKGQFEAGRSLGLSEKQTLKHVILPQAVKNILPALGNEFVVIIKESAIVS 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G  DL+     I   T  A  + ++   IY  L+   +  ++ L  ++
Sbjct: 175 VIGLRDLMYNSDMIQAATFNAFGVYVVAAVIYFILTASCSKLLSVLEGRL 224



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 4/77 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----KLVAWICRVYVEVFRNIP 140
           Y   +L G   T  LA   +   T+IG LV   + +A     K+++ +   YV  FR  P
Sbjct: 9   YYPMLLKGTGVTIALALITVFFGTLIGILVSLTKFNAKGMLGKVLSKLADAYVAFFRGTP 68

Query: 141 PLVVIFFLYKSVLSVLP 157
            ++ +F L+  V  +L 
Sbjct: 69  LMIQLFILWFGVPQLLH 85


>gi|259047505|ref|ZP_05737906.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
 gi|259035696|gb|EEW36951.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
          Length = 213

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 15/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                     T   +  FS V+G+        L+R    K       +YI   +I G P 
Sbjct: 7   YWPLFIEGATTTILLSFFSVVVGVGCGTL-MALARLSSHKVLSNAAKVYID--IIRGTPL 63

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y   F    +   N         +F+S  IA+S  T A+IAEI+RSG+ +V +
Sbjct: 64  LVQLYLVY---FGLATILDLN---------DFLSGVIAVSVNTTAYIAEIIRSGIQSVDK 111

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA ++G+    A R ++LPQAM++I+P + +++  L+K +S+   +G  DL+    
Sbjct: 112 GQMEAARSMGMPKGMAMRQIILPQAMKNILPAIGNEFATLIKETSIVSLIGIHDLMYSSD 171

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           T+   T      +L+  F+Y  ++  IA FM++L  K+   +
Sbjct: 172 TVRGATFTVFIPLLMTAFLYFVMTTTIAFFMDKLERKLQASD 213



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T  L+F  ++     GTL+   RLS++K+++   +VY+++ R  P LV 
Sbjct: 7   YWPLFIEGATTTILLSFFSVVVGVGCGTLMALARLSSHKVLSNAAKVYIDIIRGTPLLVQ 66

Query: 145 IFFLYKSV 152
           ++ +Y  +
Sbjct: 67  LYLVYFGL 74


>gi|308234441|ref|ZP_07665178.1| amino acid ABC transporter permease protein [Atopobium vaginae DSM
           15829]
 gi|328944287|ref|ZP_08241751.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
 gi|327491206|gb|EGF22981.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Atopobium vaginae DSM 15829]
          Length = 585

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 107/245 (43%), Gaps = 18/245 (7%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRL 207
                     +       +++ +     T+  +       F++G++++++          
Sbjct: 341 REQHPSFFDQIAEIWNTYHDQFIRGTFYTVIISFISTFIGFLIGLLIAIYQTIQVSKHHR 400

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R+   K+   L  +YI  F   G P +V   L +   +   +L   +            
Sbjct: 401 IRYMLYKSVAVLIRIYIEVF--RGTPMMVQAMLIF---YGSKLLFNLDL-------SPLT 448

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S +  +S  + A+++E VR G++ V +GQ+E A ALGL H      ++LPQA+ SI+P +
Sbjct: 449 SAFFIVSVNSGAYLSETVRGGILGVSKGQLEGAHALGLNHWDTMVHIILPQAVISILPSV 508

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++    +K++S+   +  ++L  +  +I   T Q  +  LI   IY +L+ + +L +  
Sbjct: 509 GNELNMNIKDTSVLNVIAVSELFFITKSIAGTTYQTFQTYLIASVIYFALTFLASLGLKY 568

Query: 388 LNAKI 392
           +   I
Sbjct: 569 VEKHI 573



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 11/80 (13%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGA-----------GRLSANKLVAWICRVY 132
           +Y    + G   T  ++F       +IG L+              R    K VA + R+Y
Sbjct: 357 TYHDQFIRGTFYTVIISFISTFIGFLIGLLIAIYQTIQVSKHHRIRYMLYKSVAVLIRIY 416

Query: 133 VEVFRNIPPLVVIFFLYKSV 152
           +EVFR  P +V    ++   
Sbjct: 417 IEVFRGTPMMVQAMLIFYGS 436


>gi|254248371|ref|ZP_04941691.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124874872|gb|EAY64862.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 597

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 1/255 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ +  +  ++ S+L  P     +    FL+   LS    T+       VF FVLG  ++
Sbjct: 41  VLALVLIAITLYSLLGNPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGFVLGAFVA 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     SR         + L      ++  L    L  L   +    P      F   +T
Sbjct: 101 LARLSRSRLLSASAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTT 160

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAM
Sbjct: 161 DLISPFLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAM 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P   +  ++L K +S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 221 RAILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 280

Query: 381 IALFMNRLNAKIALK 395
           ++    ++    A  
Sbjct: 281 LSAIQVQVERHYARG 295



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +   ++G  V   RLS ++L++     +V +FR+IP       + 
Sbjct: 75  LSGLARTLVLTLLGAVFGFVLGAFVALARLSRSRLLSASAWTFVWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTL 175


>gi|282864437|ref|ZP_06273493.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282560924|gb|EFB66470.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 288

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 10/235 (4%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
               +          L    LT+   A +    F LG +L+     + R       +++ 
Sbjct: 59  FQWDVVADHLTTASVLRGLGLTLWLTALVMALGFALGTLLA-----MGRLSRNPVLRSVS 113

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  F     P LV +   + +    P   Q   +    +        I L+ + AA+
Sbjct: 114 WGYIWLF--RSTPILVQLLFWFNIGALYP---QILGVDTVHLLGPMAVAVIGLTLHEAAY 168

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE+VR G+++V RGQ+EAA +LGL   +  R ++LPQAMR+I+PP  +  +  LK +S+
Sbjct: 169 AAEVVRGGILSVERGQLEAAQSLGLGPWRRLRRIVLPQAMRAIVPPAGNMLIGTLKGTSI 228

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +   DL+     + ++T Q I ++L+    Y++++ ++++    +  + A  
Sbjct: 229 VSIIAVQDLLYSVQLVYHRTYQVIPLLLVATLWYVAVTSLLSVGQYYVERRYARG 283



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 34/79 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    M     +GTL+  GRLS N ++  +   Y+ +FR+ P LV + F +
Sbjct: 74  LRGLGLTLWLTALVMALGFALGTLLAMGRLSRNPVLRSVSWGYIWLFRSTPILVQLLFWF 133

Query: 150 KSVLSVLPIPDHSIVLPFG 168
                   I     V   G
Sbjct: 134 NIGALYPQILGVDTVHLLG 152


>gi|118476507|ref|YP_893658.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|225862824|ref|YP_002748202.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|118415732|gb|ABK84151.1| amino acid ABC transporter membrane protein, PAAT family [Bacillus
           thuringiensis str. Al Hakam]
 gi|225788606|gb|ACO28823.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
          Length = 234

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            + +  +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I
Sbjct: 20  IMQSSFMPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--II 76

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  I  S    A+ +EI+R+ +
Sbjct: 77  RGTPLLVQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASI 125

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 126 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 185

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 186 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 227



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 22  QSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 81

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 82  LVQLFIIFYGLPTLNVEVEPYTAAVIGFSLN 112


>gi|107026286|ref|YP_623797.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116692525|ref|YP_838058.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105895660|gb|ABF78824.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116650525|gb|ABK11165.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 597

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 1/255 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ +  +  ++ S+L  P     +    FL+   LS    T+       VF FVLG  ++
Sbjct: 41  VLALVLIAITLYSLLGNPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGFVLGAFVA 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     SR         + L      ++  L    L  L   +    P      F   +T
Sbjct: 101 LARLSRSRLLSASAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTT 160

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAM
Sbjct: 161 DLISPFLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAM 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P   +  ++L K +S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 221 RAILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 280

Query: 381 IALFMNRLNAKIALK 395
           ++    ++    A  
Sbjct: 281 LSAIQVQVERHYARG 295



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +   ++G  V   RLS ++L++     +V +FR+IP       + 
Sbjct: 75  LSGLARTLVLTLLGAVFGFVLGAFVALARLSRSRLLSASAWTFVWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTL 175


>gi|315635186|ref|ZP_07890464.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315476148|gb|EFU66902.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 240

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 106/249 (42%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP  +                +    T+      F     + ++++L   
Sbjct: 1   MTLLNNFLASLPFMNAERADEVISSFWPMLEAAIDKTIPLAVISFFAGVAIALIVALIRI 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
               +   +  + L  +Y+ST  I G P LV I + +                       
Sbjct: 61  VEKPNLGMRLLQILCRIYVST--IRGTPMLVQIFIIFY-----------GLPEVGIKLDP 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ +E +R+ ++++P+GQ EA+ ++G+ + +     ++ QA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYASETIRAAILSIPKGQWEASYSIGMNYYQTFTRTIMTQALRVSVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++ +K++SLA  V   ++  V   I  +  + I I      IY  + ++++   
Sbjct: 168 PLANTFISNVKDTSLASLVLVTEMFRVAQNITAENYEFIMIYSEAALIYWCICLILSFAQ 227

Query: 386 NRLNAKIAL 394
           +RL  +++ 
Sbjct: 228 DRLEQRLSR 236


>gi|160936156|ref|ZP_02083529.1| hypothetical protein CLOBOL_01052 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440966|gb|EDP18690.1| hypothetical protein CLOBOL_01052 [Clostridium bolteae ATCC
           BAA-613]
          Length = 233

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 115/235 (48%), Gaps = 16/235 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F+++    + T  + T   I  F+ ++GIVL      + R  +EKT K   L  I 
Sbjct: 12  FYLNFVSDNRWKYLTEGLKTTLIITFFACLMGIVLGFLVG-MIRSTYEKTHKLKVLNAIC 70

Query: 226 ---TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I G P +V + + Y + F            GS    + +   +A    + A++A
Sbjct: 71  KVYLTVIRGTPVVVQLLIIYFVVF------------GSVRVDKVIVAILAFGVNSGAYVA 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG++++  GQMEA  +LG  + +    +++PQA ++++P L +++++LLK +S++ 
Sbjct: 119 EIFRSGIMSIDPGQMEAGRSLGFNYAQTMWYIIMPQAFKTVLPTLCNEFISLLKETSVSG 178

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   DL   G  I ++T  A   ++    IYL + ++    +  L  ++   E+
Sbjct: 179 YIAIQDLTKGGDIIRSRTYSAFMPLIAVAIIYLIIVMIFTKLIQILERRLRQNER 233



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 5/77 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVF 136
             +    +  G   T  + F   +   ++G LVG  R         K++  IC+VY+ V 
Sbjct: 18  SDNRWKYLTEGLKTTLIITFFACLMGIVLGFLVGMIRSTYEKTHKLKVLNAICKVYLTVI 77

Query: 137 RNIPPLVVIFFLYKSVL 153
           R  P +V +  +Y  V 
Sbjct: 78  RGTPVVVQLLIIYFVVF 94


>gi|28872293|ref|NP_794912.1| cystine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213969394|ref|ZP_03397531.1| cystine ABC tranporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
 gi|301386653|ref|ZP_07235071.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061130|ref|ZP_07252671.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato K40]
 gi|302132934|ref|ZP_07258924.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28855547|gb|AAO58607.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925765|gb|EEB59323.1| cystine ABC tranporter, permease protein [Pseudomonas syringae pv.
           tomato T1]
 gi|330966437|gb|EGH66697.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331016087|gb|EGH96143.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 222

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +  +Y+S F   G P LV + + Y   +  P L       G  + P 
Sbjct: 42  ALMRLSRFKLVNWIARIYVSFF--RGTPLLVQLFVIY---YGLPEL-------GIQLEP- 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +P
Sbjct: 89  LSAALIGFSLNMAAYACEILRAAIGSVERGQWEAAASIGMTRWQTMRRAILPQAARTALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   
Sbjct: 149 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQ 208

Query: 386 NRLNAKIALKE 396
           N+L A++   +
Sbjct: 209 NKLEARVNRHD 219



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  KLV WI R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRFKLVNWIARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +       G  LN 
Sbjct: 76  YYGLPELGIQLEPLSAALIGFSLNM 100


>gi|308513288|ref|NP_951856.3| amino acid ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39982669|gb|AAR34129.1| amino acid ABC transporter, permease protein [Geobacter
           sulfurreducens PCA]
          Length = 266

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 19/250 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + + +     P +   L   +      L    +T+         S + G++++L      
Sbjct: 36  FTASVEREKKPGYVTFLQDCLKFLPVLLKGAVMTLLLVLCTMFISPIGGLLIAL-----G 90

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +   AL    I  F   G P L+ +   Y   +  P L       G T+ P   +
Sbjct: 91  RISTFRPLSALCWFVIWLF--RGTPLLLQLFFIY---YGLPSL-------GITLKP-ITA 137

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L    +A++ EI+R  + ++  GQ EAA ALG+T+ +  R V++PQ  + ++PP+ 
Sbjct: 138 AVIGLGLNYSAYLGEIIRGAIQSIDHGQTEAAKALGMTYGQTMRRVVIPQTYKRLMPPIG 197

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ L+K+++L   +   +L+     + N T   +  +++   IYL  +        ++
Sbjct: 198 NEFIALIKDTALVSTIAMVELMRAADQMFN-TYFNVTALVLAAVIYLIFTTFFTFLFEKI 256

Query: 389 NAKIALKEKK 398
             +  + E++
Sbjct: 257 EHRAGIYERR 266



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G V T  L    M  + I G L+  GR+S  + ++ +C   + +FR  P L+ 
Sbjct: 58  FLPVLLKGAVMTLLLVLCTMFISPIGGLLIALGRISTFRPLSALCWFVIWLFRGTPLLLQ 117

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +FF+Y  + S+            G+ LN 
Sbjct: 118 LFFIYYGLPSLGITLKPITAAVIGLGLNY 146


>gi|15902453|ref|NP_358003.1| ABC transporter substrate binding protein - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|15457972|gb|AAK99213.1| ABC transporter substrate binding protein - glutamine transport
           [Streptococcus pneumoniae R6]
          Length = 311

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 8/173 (4%)

Query: 228 LIFGLPTLVLIAL--KYQLHFDKPVLGQFNFIGGSTVS------PEFMSLYIALSCYTAA 279
           +I+GL  LV   L    ++    P++ Q   I   T           ++    +S  T A
Sbjct: 121 VIYGLQKLVGWVLNVYIEIFRGTPMIVQSMVIYYGTAQAFGINLDRTLAAIFIVSINTGA 180

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ EIVR G++AV +GQ EAA ALG+TH +  R ++LPQ +R+I+P   ++++  +K++S
Sbjct: 181 YMTEIVRGGILAVDKGQFEAATALGMTHNQTMRKIVLPQVVRNILPATGNEFVINIKDTS 240

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +   +L   G T+  QT Q  +   I   IY  L+  +   +  +  ++
Sbjct: 241 VLNVISVVELYFSGNTVATQTYQYFQTFTIIAVIYFVLTFTVTRILRFIERRM 293


>gi|126698331|ref|YP_001087228.1| amino acid ABC transporter permease [Clostridium difficile 630]
 gi|254974369|ref|ZP_05270841.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255091763|ref|ZP_05321241.1| amino acid ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
 gi|255099867|ref|ZP_05328844.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|255305755|ref|ZP_05349927.1| amino acid ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
 gi|255313493|ref|ZP_05355076.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255516181|ref|ZP_05383857.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255649277|ref|ZP_05396179.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|255654801|ref|ZP_05400210.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
 gi|260682448|ref|YP_003213733.1| amino acid ABC transporter permease [Clostridium difficile CD196]
 gi|260686047|ref|YP_003217180.1| amino acid ABC transporter permease [Clostridium difficile R20291]
 gi|306519377|ref|ZP_07405724.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-32g58]
 gi|115249768|emb|CAJ67585.1| ABC-type transport system, aminoacid-family permease [Clostridium
           difficile]
 gi|260208611|emb|CBA61332.1| amino acid ABC transporter, permease protein [Clostridium difficile
           CD196]
 gi|260212063|emb|CBE02647.1| amino acid ABC transporter, permease protein [Clostridium difficile
           R20291]
          Length = 225

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 106/189 (56%), Gaps = 6/189 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           +++    K  +A+  +YI   ++ G P LV I   Y + F  P L    F     +  EF
Sbjct: 42  MAKISKSKVLRAISSIYIE--VLRGTPLLVQI---YIVWFGLPQL-GIRFPMLFGIPSEF 95

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++   ALS  + A++AEI+RSG+ +V  GQMEA+ +LGL +    R +++PQA+++I+P 
Sbjct: 96  IASAFALSVNSGAYVAEILRSGIQSVDNGQMEASRSLGLNYWSTMRYIIIPQAIKNILPS 155

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ L+K SS+   +G  +++     + N   +A+E +++   IY  ++  ++  + 
Sbjct: 156 LANEFITLVKESSIISVIGVVEIMRTADIVKNAAFRALEPLIVAAAIYFVITFTLSRLVG 215

Query: 387 RLNAKIALK 395
            L  K+++ 
Sbjct: 216 LLEKKLSVS 224



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 41/84 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  S + T+ L G   T  ++   +    IIG ++   ++S +K++  I  +Y+EV 
Sbjct: 3   LDFSFLSRFGTSFLEGTGVTVSISLVALCFGFIIGIIICMAKISKSKVLRAISSIYIEVL 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R  P LV I+ ++  +  +     
Sbjct: 63  RGTPLLVQIYIVWFGLPQLGIRFP 86


>gi|47564802|ref|ZP_00235846.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
 gi|47558175|gb|EAL16499.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
          Length = 226

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            + +  +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I
Sbjct: 12  IMQSSFMPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--II 68

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  I  S    A+ +EI+R+ +
Sbjct: 69  RGTPLLVQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASI 117

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 118 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 177

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 178 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 219



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 14  QSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 73

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 74  LVQLFIIFYGLPTLNVEVEPYTAAVIGFSLN 104


>gi|152970647|ref|YP_001335756.1| amino acid ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238895146|ref|YP_002919881.1| amino acid ABC transport system inner membrane component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|330012781|ref|ZP_08307485.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955496|gb|ABR77526.1| amino acid ABC transporter [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238547463|dbj|BAH63814.1| amino acid ABC transport system inner membrane component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328533704|gb|EGF60398.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 254

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 15/231 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYISTFL--IFGLPTLVL 237
           +T+       +   + G+ L L     + H   K   + L    +  ++    G P  V 
Sbjct: 22  MTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVRFYVSAFRGTPLFVQ 81

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPE------------FMSLYIALSCYTAAFIAEIV 285
           I + +       +  +   +  S +               F+S  +A++    A+++EI 
Sbjct: 82  IMVVHFALVPLFINPRDGLLVTSGLMSADFARELRASYGAFLSCIVAITLNAGAYVSEIF 141

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++ +GQMEA+ ALG+   K  R V+LPQA R I+PPL +  + ++K+SSLA A+G
Sbjct: 142 RAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNAIAIVKDSSLASAIG 201

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ADL     T+        E  L    +Y  ++ ++A  +NRL  +    +
Sbjct: 202 LADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLVNRLEKRFGKSD 252



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVE 134
           Y    + G + T       +I  T+ G  +G GR++             LV +  R YV 
Sbjct: 12  YGPLFVDGALMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVRFYVS 71

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR  P  V I  ++ +++ +   P   +++  G+   +             + I   + 
Sbjct: 72  AFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSGLMSADFARELRASYGAFLSCIVAITL 131

Query: 195 VLGIVLS 201
             G  +S
Sbjct: 132 NAGAYVS 138


>gi|212640609|ref|YP_002317129.1| glutamine ABC transporter permease [Anoxybacillus flavithermus WK1]
 gi|212562089|gb|ACJ35144.1| ABC-type glutamine transport system, permease component
           [Anoxybacillus flavithermus WK1]
          Length = 218

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 66/221 (29%), Positives = 110/221 (49%), Gaps = 19/221 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +    +F  +LG+ + L      +    +  +     Y+  F   G 
Sbjct: 14  PFFLKGVLWTIGLSLIGILFGTILGLAIGL-----GKMVQNRLVRLPFDWYVHFF--RGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           P  V I L             F  +   T  P   +S  I+LS   AA+IAEI R+G+ +
Sbjct: 67  PLFVQILLI-----------HFGVMPMFTAQPNPLVSGAISLSLNAAAYIAEIFRAGIQS 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQMEAA +LG+TH +A R ++LPQA++ +IPPL ++++ L+K+SSLA  +   +L+ 
Sbjct: 116 IDRGQMEAARSLGMTHVQAMRYIILPQAIKRMIPPLGNEFVVLIKDSSLAAIIAAPELMY 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  +  Q  +  E  L    IYL L++ ++  ++RL  + 
Sbjct: 176 WGRAMQGQYYRVWEPYLTVALIYLVLTLSLSKLLHRLERRY 216



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 3/194 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   L G + T  L+  G++  TI+G  +G G++  N+LV      YV  FR  P  V 
Sbjct: 12  YAPFFLKGVLWTIGLSLIGILFGTILGLAIGLGKMVQNRLVRLPFDWYVHFFRGTPLFVQ 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  ++  V+ +     + +V        N       +       I          L +  
Sbjct: 72  ILLIHFGVMPMFTAQPNPLVSGAISLSLNAAAYIAEIFRAGIQSIDRGQMEAARSLGMTH 131

Query: 205 TRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPVLGQFNFIGGST 261
            +  R+    +   + +P L     ++    +L  I    +L ++ + + GQ+  +    
Sbjct: 132 VQAMRYIILPQAIKRMIPPLGNEFVVLIKDSSLAAIIAAPELMYWGRAMQGQYYRVWEPY 191

Query: 262 VSPEFMSLYIALSC 275
           ++   + L + LS 
Sbjct: 192 LTVALIYLVLTLSL 205


>gi|154505132|ref|ZP_02041870.1| hypothetical protein RUMGNA_02645 [Ruminococcus gnavus ATCC 29149]
 gi|153794611|gb|EDN77031.1| hypothetical protein RUMGNA_02645 [Ruminococcus gnavus ATCC 29149]
          Length = 228

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 120/234 (51%), Gaps = 16/234 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS- 225
           +  F+ +         +     + +F+ ++G+++  F   + R  H+KTGK   L  I  
Sbjct: 8   YQNFIEDDRWLLLVNGLKVTILVTLFALLVGVIIG-FTVAIIRSLHDKTGKFKILNAICK 66

Query: 226 --TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               +I G P+++ +   Y + F    L      G            +A    + A++AE
Sbjct: 67  VYLTIIRGTPSMIQVLFMYLVVFGASSLNSIVIGG------------LAFGINSGAYVAE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG++A+P GQ EA  +LGL++ +  RL+++PQA ++++P L ++ + L+K +++   
Sbjct: 115 IVRSGIMAIPEGQTEAGRSLGLSYGQTMRLIIMPQAFKNVLPALVNEMIVLIKETAIIGY 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G  DL      I ++T +A   ++    IYL+L +++  FMN+L  ++   E+
Sbjct: 175 IGEQDLTKAAMVIQSRTFEAFIPLITAAVIYLALVMLLTFFMNKLERRLRTNER 228


>gi|326773223|ref|ZP_08232506.1| ABC-type amino acid transport system, permease component
           [Actinomyces viscosus C505]
 gi|326636453|gb|EGE37356.1| ABC-type amino acid transport system, permease component
           [Actinomyces viscosus C505]
          Length = 321

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 7/215 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----A 239
               +   +  +GIVL++  T + R       + + L Y+  F    + T ++      A
Sbjct: 69  WTLLLTFMAMAIGIVLAV-TTAILRQSSNPVLRWVALAYLWFFRGTPIYTQLVFWGALSA 127

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L  +L    P   +      +TV   F++  + L     A+++EIVRSGL +V +GQ EA
Sbjct: 128 LYQKLSLGIPFGPELLTFKTTTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEA 187

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIIN 358
           A ALG++  +  R ++LPQAMR I+PP  ++ +++LK +SL +AV F  DL  V  +  +
Sbjct: 188 AGALGMSRGQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNSYAS 247

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            T Q I ++L+    Y+ ++ ++ +  + +     
Sbjct: 248 LTYQIIPLLLVAAIWYIIITSILMVGQHYIERYYG 282



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 7/107 (6%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +     T  L F  M    ++       R S+N ++ W+   Y+  FR  P    + F  
Sbjct: 64  VKAVGWTLLLTFMAMAIGIVLAVTTAILRQSSNPVLRWVALAYLWFFRGTPIYTQLVFWG 123

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                          L  G+      L+F T T+ T     V    +
Sbjct: 124 ALSALYQK-------LSLGIPFGPELLTFKTTTVFTPFVAAVLGLGI 163


>gi|226309415|ref|YP_002769375.1| ABC transporter substrate-binding/permease protein [Rhodococcus
           erythropolis PR4]
 gi|226188532|dbj|BAH36636.1| putative ABC transporter substrate-binding/permease protein
           [Rhodococcus erythropolis PR4]
          Length = 594

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 16/239 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                                +     + + S ++G +L +    ++     +  +    
Sbjct: 349 KDTFFDWDLYKKAFPDLLKTGLPNTLILALASGIIGTILGMLL-AVAGISRTRWLRWPAR 407

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y   F   GLP +V+I +          LG    + G T S  +     ALS   +A+I
Sbjct: 408 VYTDIF--RGLPAVVIILII--------GLGVGPIVKGITGSNPYWLGVAALSLLASAYI 457

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI RSG+ +V  GQ+EA+ ALG ++RK+  LV++PQ +R ++P L +Q+++L+K+SSL 
Sbjct: 458 GEIFRSGIQSVESGQLEASRALGFSYRKSMSLVVIPQGVRRVLPALMNQFISLIKDSSLI 517

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G      +L +VG  +  QTG ++  ++     YL+L+I +   +N ++ ++    
Sbjct: 518 YFLGLLVTQRELFAVGRDLNAQTG-SLSPLVAAGLFYLALTIPLTHLVNYIDNRLRTGR 575



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 1/188 (0%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  LA +  I  TI+G L+    +S  + + W  RVY ++FR +P +V+I  +   
Sbjct: 369 GLPNTLILALASGIIGTILGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILIIGLG 428

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           V  ++     S     G+   +   S     +  +    V S  L    +L  +      
Sbjct: 429 VGPIVKGITGSNPYWLGVAALSLLASAYIGEIFRSGIQSVESGQLEASRALGFSYRKSMS 488

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                + +  + +   +   +  +   +L Y L         F            +S  +
Sbjct: 489 LVVIPQGVRRV-LPALMNQFISLIKDSSLIYFLGLLVTQRELFAVGRDLNAQTGSLSPLV 547

Query: 272 ALSCYTAA 279
           A   +  A
Sbjct: 548 AAGLFYLA 555


>gi|288871380|ref|ZP_06117360.2| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Clostridium hathewayi DSM 13479]
 gi|288863721|gb|EFC96019.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Clostridium hathewayi DSM 13479]
          Length = 283

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 15/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-----LLYISTFLI 229
            L     TM       +   ++G  + +  T           + +      +L +   + 
Sbjct: 39  FLDGAGKTMVIAIVGTLIGCLIGFAVGIVQTIPVDKSDNPVKRVILGFIKLILNVYVEVF 98

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V     Y            + +    +SP F + +I +S  T A++AE VR G+
Sbjct: 99  RGTPMMVQAMFIYYGS---------SVLFDINMSPMFAAYFI-VSINTGAYMAETVRGGI 148

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++  GQ E A A+G+TH +    V++PQA+R+I+P + +  +  +K++ +   +G  +L
Sbjct: 149 LSIDPGQTEGAKAIGMTHFQTMVNVIMPQALRNIMPQIGNNLIINIKDTCVLSVIGVVEL 208

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 +        E   I M IY  L+   +  +     K+
Sbjct: 209 FYATKGVAGAYYTYFEAFTITMVIYFILTFTCSRILRYWEKKM 251



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 12/80 (15%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL-----SANKL-------VAWICRVY 132
           Y  + L G   T  +A  G +   +IG  VG  +      S N +       +  I  VY
Sbjct: 35  YGVSFLDGAGKTMVIAIVGTLIGCLIGFAVGIVQTIPVDKSDNPVKRVILGFIKLILNVY 94

Query: 133 VEVFRNIPPLVVIFFLYKSV 152
           VEVFR  P +V   F+Y   
Sbjct: 95  VEVFRGTPMMVQAMFIYYGS 114


>gi|49083678|gb|AAT51101.1| PA5075 [synthetic construct]
          Length = 321

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   + + S  +G+ + L A  L R     T   L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWLSLVSGAIGLAIGLVAG-LCRLSKNPTLHDLSTIYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEI+R+G+ ++ RGQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIIRAGVQSIARGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNAGQSMRYVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL L++ ++   +RL  ++   +
Sbjct: 285 FSTFEIWFCVAALYLLLNLPLSHMASRLERRLGQSD 320



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T WL+         IG + G  RLS N  +  +  +YVE+ R  P LV IF  
Sbjct: 118 LLWGLWTTLWLSLVSGAIGLAIGLVAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIF 177

Query: 149 YKSV 152
           Y  +
Sbjct: 178 YFFI 181


>gi|20807014|ref|NP_622185.1| ABC-type amino acid transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
 gi|20515499|gb|AAM23789.1| ABC-type amino acid transport system, permease component
           [Thermoanaerobacter tengcongensis MB4]
          Length = 220

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 14/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+   +  +G+++ LF   L +    K  K +   YI   +I G P LV + L Y  
Sbjct: 21  MTLKLTFLAVTIGVLMGLFI-ALMKMSSIKPIKLVASSYIE--VIRGTPLLVQLLLIYN- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L QF         P F +   AL+  ++A++AEI+R+G+ AV  GQ EAA +LG
Sbjct: 77  -----GLMQFG-----MNIPAFTAGVSALAINSSAYVAEIIRAGIQAVDPGQNEAARSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +TH  A R V++PQA+++I+P L ++++ +LK S++   +GFADL      I + T +  
Sbjct: 127 MTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSVTYRYF 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E  +I   IY  +++  +  ++    ++   +
Sbjct: 187 EPYIIIAAIYFVMTLTFSKLLSLFERRLRAGD 218



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 41/111 (36%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           V + S   Y    + G + T  L F  +    ++G  +   ++S+ K +  +   Y+EV 
Sbjct: 3   VDFLSMVKYTPLFISGLIMTLKLTFLAVTIGVLMGLFIALMKMSSIKPIKLVASSYIEVI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R  P LV +  +Y  ++               + +N+       +     A
Sbjct: 63  RGTPLLVQLLLIYNGLMQFGMNIPAFTAGVSALAINSSAYVAEIIRAGIQA 113


>gi|307328905|ref|ZP_07608074.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306885415|gb|EFN16432.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 297

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R     V    + +    ++  P     +    F     L    +T+          F 
Sbjct: 35  WRWAAVAVTAVLVAQFANGLITNPGWEWDVFADFFTTRTILKAVWITIQLTCYGTALGFA 94

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDK 248
           LGIVL+       R       K++   YI  F    +P +V +   + L        F  
Sbjct: 95  LGIVLAFM-----RLSRSPFLKSVAFTYIWAF--RSIPLIVQLLFWFNLTYLYKRLDFGI 147

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F     + +     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   
Sbjct: 148 PFGPGFFSFDTAGLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVDGGQLEAAAALGIPRL 207

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      I  + G+ + +++
Sbjct: 208 RQLRRIVLPQAMRSILPNAANEVISLFKGTSIVSVMAIGELFYQVQVIYGRNGRVVPLLM 267

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+ ++++    +  + +    +
Sbjct: 268 VATVWYIILTTVLSIAQYYVERRFSRGATR 297



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 42/146 (28%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL     T  L   G      +G ++   RLS +  +  +   Y+  FR+IP +V +
Sbjct: 71  TRTILKAVWITIQLTCYGTALGFALGIVLAFMRLSRSPFLKSVAFTYIWAFRSIPLIVQL 130

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
            F +        +       P     +  GL            +   ++   IV      
Sbjct: 131 LFWFNLTYLYKRLDFGIPFGPGFFSFDTAGLVGAMSAAVLGLALHQAAYAAEIVRGGVLA 190

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFG 231
                        +P L     ++  
Sbjct: 191 VDGGQLEAAAALGIPRLRQLRRIVLP 216


>gi|239818082|ref|YP_002946992.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239804659|gb|ACS21726.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 256

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 107/255 (41%), Gaps = 10/255 (3%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           +    +          +   +       +T+       +     G+ L+L      RH  
Sbjct: 1   MEQPILLFGWFRWDILVEYRDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLARPRHAP 60

Query: 213 EKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV------- 262
                   L + +T  +    G P  V I L +       +      +    +       
Sbjct: 61  WSWVARFFLRWPATVYVSFFRGTPLFVQILLIHFAVMPVFIHPATGLLISGDLARELKQE 120

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               +S  +AL+  +AA+I+E+ R+G+ ++ RGQ +A  ++G T  +  R V+LPQA R 
Sbjct: 121 HGALISGVVALTLNSAAYISEVFRAGIQSISRGQFDAGRSIGFTPLQVMRYVVLPQAFRR 180

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PPL +  + LLK++SL  A+G A+L     T+     +  E  L    +Y  +++++ 
Sbjct: 181 MLPPLGNNAIALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVVYWVMTLVLT 240

Query: 383 LFMNRLNAKIALKEK 397
             + RL  ++A  ++
Sbjct: 241 TMLRRLEHRLARSDR 255



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVE 134
           Y      G   T  +    ++  +  G  +   RL+  +           + W   VYV 
Sbjct: 19  YRDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLARPRHAPWSWVARFFLRWPATVYVS 78

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIP 159
            FR  P  V I  ++ +V+ V   P
Sbjct: 79  FFRGTPLFVQILLIHFAVMPVFIHP 103


>gi|325507790|gb|ADZ19426.1| Amino acid (glutamine) ABC transporter, permease component
           [Clostridium acetobutylicum EA 2018]
          Length = 215

 Score =  153 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/211 (27%), Positives = 108/211 (51%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+   + + G +++L    L +    K   A+   Y  T++  G P L+ +   Y  
Sbjct: 19  VTIKLTFMAIIFGCIIALLVAIL-KVSANKFLNAVGGFY--TWIFRGTPLLLQL---YVF 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  P L                +  + LS  + A+IAEI+R G+IA+ +GQ EA+ ALG
Sbjct: 73  YYGLPALN--------INISATQAAILGLSLNSGAYIAEIIRGGIIAIDKGQFEASKALG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T+ +  R V+LPQA+R IIPP+ ++++ L+K++SL   +   +L+     +++ +G A+
Sbjct: 125 FTYGQTMRKVILPQAVRVIIPPMGNEFIALIKDTSLVSVITMEELLRKAQLLVSSSGDAV 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +I    YL L+ +     +R+  K++L 
Sbjct: 185 TPYVITGVFYLVLTTVFTFLFSRIEKKLSLY 215



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +       +L G + T  L F  +I   II  LV   ++SANK +  +   Y  +F
Sbjct: 1   MDFNTLDKVIPVLLRGTLVTIKLTFMAIIFGCIIALLVAILKVSANKFLNAVGGFYTWIF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           R  P L+ ++  Y  + ++      +     G+ LN+       +     A 
Sbjct: 61  RGTPLLLQLYVFYYGLPALNINISATQAAILGLSLNSGAYIAEIIRGGIIAI 112


>gi|257067440|ref|YP_003153695.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256558258|gb|ACU84105.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 369

 Score =  153 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 57/244 (23%), Positives = 111/244 (45%), Gaps = 15/244 (6%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +    F     +     T+   A      F LG+VL+L   RLS+        
Sbjct: 102 NPRWEWGVVAQWFFAESIIRGLLETLRLTAAAGAIGFGLGLVLALM--RLSKSSLIS--- 156

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--------FNFIGGSTVSPEFMSL 269
              + +  +++    P LV + L Y L +    +          F     S +    ++ 
Sbjct: 157 --GVSWTFSWVFRSTPLLVQLLLWYNLGYLYEQVSLGIPFTGATFFEARTSDLMTPMLAA 214

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L  + AA+ AE++R G+++V +GQ+EAA ALG+  R  +  ++LPQAMR+I+PP  +
Sbjct: 215 ILGLGLHQAAYAAELIRGGILSVDQGQLEAASALGIPARDRSLRIVLPQAMRAILPPAFN 274

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + + L+K +S+   +  A+L      I  +T Q + ++L+    Y+ ++  +++    + 
Sbjct: 275 EIIGLVKGTSIVYVLAHAELFFTVQLIYGRTQQVLPMLLVATLWYVVITSALSVGQYYIE 334

Query: 390 AKIA 393
              +
Sbjct: 335 RHFS 338



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 33/70 (47%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +   +A +I+ G + T  L  +       +G ++   RLS + L++ +   +  VFR+ P
Sbjct: 111 AQWFFAESIIRGLLETLRLTAAAGAIGFGLGLVLALMRLSKSSLISGVSWTFSWVFRSTP 170

Query: 141 PLVVIFFLYK 150
            LV +   Y 
Sbjct: 171 LLVQLLLWYN 180


>gi|220929987|ref|YP_002506896.1| polar amino acid ABC transporter inner membrane subunit
           [Clostridium cellulolyticum H10]
 gi|220000315|gb|ACL76916.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulolyticum H10]
          Length = 221

 Score =  153 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 105/222 (47%), Gaps = 9/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +          I + + +LG+++      L +    K  +A+   YI    I G P 
Sbjct: 9   YWYYFVSGTVNTIVIAILTVILGVIIGTGL-ALMKISRNKILRAIASSYIEF--IRGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L + L    P    F           ++   IA+S  + A++AEI+R+G+ AV +
Sbjct: 66  LVQITLFFYL-ISLPEFHIFGLA-----MDRYIPGVIAMSVNSGAYVAEIIRAGIQAVDK 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA ++G T  +A R ++LPQA+R+I+P L ++++ ++K SS+   +   +L+    
Sbjct: 120 GQMEAARSIGFTSGQAMRYIVLPQAIRNILPALGNEFVVVIKESSILSVISITELMRSSD 179

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     +  E +++   IY  L+  +   +     ++   +
Sbjct: 180 IVKAAIYRPFEPLIVTACIYFVLTFSLTRLLGFAERRMRASD 221



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +   S Y    + G VNT  +A   +I   IIGT +   ++S NK++  I   Y+E  
Sbjct: 1   MDFGFLSEYWYYFVSGTVNTIVIAILTVILGVIIGTGLALMKISRNKILRAIASSYIEFI 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R  P LV I   +  +        
Sbjct: 61  RGTPLLVQITLFFYLISLPEFHIF 84


>gi|254229165|ref|ZP_04922584.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262395515|ref|YP_003287368.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
 gi|151938250|gb|EDN57089.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262339109|gb|ACY52903.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 265

 Score =  153 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 19/250 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+      G +     +    +T++ +A    F+ VLG+V +L      
Sbjct: 34  MGYQWQWERVPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTALL----- 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K G  +   Y+   +I   P LV I L Y +             G       F +
Sbjct: 89  RLSDSKVGNVIGATYVE--VIRNTPLLVQIYLLYFVF------------GPVIGLDRFST 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AEI+R+GL ++P+GQ EAA  LGL+     + V+LPQ ++  +PPLT
Sbjct: 135 AVLALSLFQGAYTAEILRAGLNSIPKGQFEAAQTLGLSPFYTYKDVILPQVLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL +    I+++T    EI      IYL+L++ ++     L
Sbjct: 195 NEVVSLIKNSSIVSVMAIFDLTTQARNIVSETAMPFEIWFTVAAIYLALTLSLSGLSAWL 254

Query: 389 NAKIALKEKK 398
             K+    +K
Sbjct: 255 EHKLGASWRK 264



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 1/97 (1%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVG 115
           L  G   +  +  +E     + +  D  +  A ++ G + T  ++   +    ++G +  
Sbjct: 27  LDSGADAMGYQWQWERVPDYIAFYEDGEWWPAELIDGLLVTLNISAISLFFTLVLGLVTA 86

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             RLS +K+   I   YVEV RN P LV I+ LY   
Sbjct: 87  LLRLSDSKVGNVIGATYVEVIRNTPLLVQIYLLYFVF 123


>gi|171319193|ref|ZP_02908312.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171095621|gb|EDT40582.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 297

 Score =  153 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 110/214 (51%), Gaps = 5/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V +  LGIVL +  T + R        A+   YI  F   G P ++ + L + L  
Sbjct: 82  IVMTVLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYIWLF--RGTPVILQLLLWFNLAL 138

Query: 247 DKPVLGQFNFIGGSTV--SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P LG        TV     F++  + L     A+ +E+VR+GL++V  GQ EAA ++G
Sbjct: 139 VFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIG 198

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V +A+++     I     + I
Sbjct: 199 MARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVI 258

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E++++    YL++  +++L   R+  + A    +
Sbjct: 259 ELLIVAGIWYLAVVTVLSLAQARVERRFARGVGR 292



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G  NT  +    M    ++G +    RLS+N ++  I + Y+ +FR  P ++ +   
Sbjct: 74  ILTGLGNTIVMTVLAMTLGIVLGVVTAVMRLSSNPVLGAIAQGYIWLFRGTPVILQLLLW 133

Query: 149 YKSVL 153
           +   L
Sbjct: 134 FNLAL 138


>gi|52144882|ref|YP_081947.1| amino acid ABC transport system, permease [Bacillus cereus E33L]
 gi|51978351|gb|AAU19901.1| amino acid ABC transport system, permease [Bacillus cereus E33L]
          Length = 269

 Score =  153 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 19/253 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
                    L      + + +    M      L    +T+       V   ++G++ + F
Sbjct: 20  PTLCGAFHSLLKSIQYEVTHMFEIFMSTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF 79

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R  + K   ++  +YI   +I G P +V IA+ Y              I    V 
Sbjct: 80  -----RISNNKFLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVF 120

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F +  IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  
Sbjct: 121 TPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQS 180

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL +Q++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++   
Sbjct: 181 IPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLETYIIVGLYYLVLVLLFTY 240

Query: 384 FMNRLNAKIALKE 396
            +N L  ++  KE
Sbjct: 241 LVNLLEKRLQRKE 253



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 37/88 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK +  I  VY+ + R  P +V I  L
Sbjct: 51  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKFLNSIAHVYIAIIRGTPLIVQIAIL 110

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 111 YFGITSVVVFTPFWAGAIALAIHNGAYI 138


>gi|229817433|ref|ZP_04447715.1| hypothetical protein BIFANG_02695 [Bifidobacterium angulatum DSM
           20098]
 gi|229785222|gb|EEP21336.1| hypothetical protein BIFANG_02695 [Bifidobacterium angulatum DSM
           20098]
          Length = 327

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 9/264 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R  P +  I     + + V  +  +       ++      +       T   + V S  +
Sbjct: 24  RTGPVVAAIVVALFAAMLVQGLITNPRFEWHIVWKYLFNENVLEGIKYT-LLLTVISMAI 82

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL 251
            IVL++    + R       + +   YI  F    + T ++    +      +    P  
Sbjct: 83  AIVLAVLL-AIMRKSINPVLRGVSWFYIWFFRGTPVYTQLVFWGLFAVLVPRIGIGIPFT 141

Query: 252 -GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             +F  I   +V   F + ++ L+   AA++AEIVR+GL AV  GQ EAA ALG+     
Sbjct: 142 SVEFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRTLI 201

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILI 369
            R ++LPQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++
Sbjct: 202 MRRIILPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAISTRLYKPIPLLIV 261

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL ++ ++ +  +RL     
Sbjct: 262 ACIWYLVITSILMVIQSRLEKHFG 285



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M  A ++  L+   R S N ++  +   Y+  FR  P    + F  
Sbjct: 66  LEGIKYTLLLTVISMAIAIVLAVLLAIMRKSINPVLRGVSWFYIWFFRGTPVYTQLVFWG 125

Query: 150 KSVLSVLP 157
              + V  
Sbjct: 126 LFAVLVPR 133


>gi|225571603|ref|ZP_03780599.1| hypothetical protein CLOHYLEM_07701 [Clostridium hylemonae DSM
           15053]
 gi|225159680|gb|EEG72299.1| hypothetical protein CLOHYLEM_07701 [Clostridium hylemonae DSM
           15053]
          Length = 230

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 16/230 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---T 226
           F+      +    +    KI  F+ ++GI L  F   + R  +++TGK   L  +     
Sbjct: 13  FITKSRWKYILDGLGVTLKITFFAVLIGIALG-FLVAIVRSTYDRTGKLKILNLLCKLYL 71

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V + + Y + F            GS    + +   +A    + A++AEI R
Sbjct: 72  TVIRGTPVVVQLLIIYFVIF------------GSMDIDKVIVAVLAFGINSGAYVAEIFR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++++  GQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S++  +  
Sbjct: 120 SGIMSIDNGQFEAGRSLGFNYTQTMIHIIMPQAFKNVLPALGNEFIVLLKETSVSGYIAM 179

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            DL   G  I +QT  A   ++    IYL++ ++    +N L  ++   +
Sbjct: 180 QDLTKGGDIIRSQTFDAFMPLIGVALIYLAMVLIFTKLVNMLERRLRSSD 229



 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-----RLSANKLVAWICRVYVEVFRNIP 140
              IL G   T  + F  ++    +G LV        R    K++  +C++Y+ V R  P
Sbjct: 19  WKYILDGLGVTLKITFFAVLIGIALGFLVAIVRSTYDRTGKLKILNLLCKLYLTVIRGTP 78

Query: 141 PLVVIFFLYKSVLSVL 156
            +V +  +Y  +   +
Sbjct: 79  VVVQLLIIYFVIFGSM 94


>gi|225575188|ref|ZP_03783798.1| hypothetical protein RUMHYD_03277 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037596|gb|EEG47842.1| hypothetical protein RUMHYD_03277 [Blautia hydrogenotrophica DSM
           10507]
          Length = 229

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 110/227 (48%), Gaps = 16/227 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-- 227
           F+ +    + T  +    ++   + ++GI+L LF   + R  ++KT K   L +I     
Sbjct: 12  FVTDDRWKYITDGLKVTLEVTFLAVLIGILLGLFV-AIVRSTYDKTHKLKILNFICNIYI 70

Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V + + Y + F             S    +     +A    + A++AEI R
Sbjct: 71  TVIRGTPVVVQLLIIYFVVF------------ASMDVSKVFVAVMAFGMNSGAYVAEIFR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++++ +GQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S+A  +  
Sbjct: 119 SGIMSIDQGQFEAGRSLGFNYAQTMVHIIMPQAFKNVLPALGNEFIVLLKETSVAGYIAL 178

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            DL   G  I ++T  A   ++    IYL + ++    +  L  ++ 
Sbjct: 179 QDLTKGGDIIRSRTYDAFMPLIAVALIYLVMVMIFTKLVALLERRLR 225


>gi|219854226|ref|YP_002471348.1| hypothetical protein CKR_0883 [Clostridium kluyveri NBRC 12016]
 gi|219567950|dbj|BAH05934.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 219

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           ++ V + +LG +L +F   L +       + +  +Y   F   G P L
Sbjct: 13  LPILLKGSVMTIELTVITLILGTILGIFL-ALLKLSKNMVLRIISSIYTWVF--RGTPLL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y             F+G       F +  + L+    A++AEI+R G+ ++ +G
Sbjct: 70  LQLFFFYY---------GLPFVGIELK--PFSAAVLGLALNCGAYMAEIIRGGIQSIHKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG ++ +  R ++LPQ  + IIPP+ ++++ +LK++SL   +   +L+     
Sbjct: 119 QFEAAKALGFSYGETMRRIILPQTWKVIIPPVGNEFIAILKDTSLVSTIAMVELMRSAQQ 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I   +   I +      +YL ++ M     +    K+A+ 
Sbjct: 179 IYASSFDPISVFFTAAVLYLIMTTMFTTVFSAFEKKLAVY 218



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L    +I  TI+G  +   +LS N ++  I  +Y  VFR  P L+ +FF 
Sbjct: 16  LLKGSVMTIELTVITLILGTILGIFLALLKLSKNMVLRIISSIYTWVFRGTPLLLQLFFF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  V            G+ LN
Sbjct: 76  YYGLPFVGIELKPFSAAVLGLALN 99


>gi|15600268|ref|NP_253762.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107104174|ref|ZP_01368092.1| hypothetical protein PaerPA_01005247 [Pseudomonas aeruginosa PACS2]
 gi|116053222|ref|YP_793544.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894174|ref|YP_002443043.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238218|ref|ZP_04931541.1| hypothetical protein PACG_04344 [Pseudomonas aeruginosa C3719]
 gi|254244043|ref|ZP_04937365.1| hypothetical protein PA2G_04877 [Pseudomonas aeruginosa 2192]
 gi|296391925|ref|ZP_06881400.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|9951368|gb|AAG08460.1|AE004920_10 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115588443|gb|ABJ14458.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170149|gb|EAZ55660.1| hypothetical protein PACG_04344 [Pseudomonas aeruginosa C3719]
 gi|126197421|gb|EAZ61484.1| hypothetical protein PA2G_04877 [Pseudomonas aeruginosa 2192]
 gi|218774402|emb|CAW30219.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 320

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   + + S  +G+ + L A  L R     T   L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWLSLVSGAIGLAIGLVAG-LCRLSKNPTLHDLSTIYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEI+R+G+ ++ RGQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIIRAGVQSIARGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNAGQSMRYVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL L++ ++   +RL  ++   +
Sbjct: 285 FSTFEIWFCVAALYLLLNLPLSHMASRLERRLGQSD 320



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T WL+         IG + G  RLS N  +  +  +YVE+ R  P LV IF  
Sbjct: 118 LLWGLWTTLWLSLVSGAIGLAIGLVAGLCRLSKNPTLHDLSTIYVELVRGTPLLVQIFIF 177

Query: 149 YKSV 152
           Y  +
Sbjct: 178 YFFI 181


>gi|258645330|ref|ZP_05732799.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260402679|gb|EEW96226.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 212

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 13/219 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R L    +      +I  FS  +G  + LF   ++R    K  + +  +Y     I G 
Sbjct: 7   QRALPILLMGAGVTIEITAFSVAIGFFIGLFVG-IARISQFKILRIMAAVYAD--CIRGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I L Y   F  P+               F++   A    + A+++EI R+G+ A+
Sbjct: 64  PLLVQIFLIY---FALPMAIG-------QRVEPFIAAVAACGINSGAYVSEIFRAGIQAI 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQMEA  +LGLT  +  R ++LPQA ++I+PPL ++++ +LK+SSL   +GF +L   
Sbjct: 114 DVGQMEAGRSLGLTWWQTMRFIILPQAFKNILPPLGNEFIAMLKDSSLVSVIGFEELTRR 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  II QT  + EI +    +YL +++ I+  +  L  +
Sbjct: 174 GQLIIAQTYGSFEIWMTVAVLYLIMTMAISRIVAFLEKR 212



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   T  +    +     IG  VG  R+S  K++  +  VY +  R  P LV IF +
Sbjct: 13  LLMGAGVTIEITAFSVAIGFFIGLFVGIARISQFKILRIMAAVYADCIRGTPLLVQIFLI 72

Query: 149 YKSVLSVLPIPDHSIV 164
           Y ++   +       +
Sbjct: 73  YFALPMAIGQRVEPFI 88


>gi|229494745|ref|ZP_04388503.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodococcus erythropolis SK121]
 gi|229318412|gb|EEN84275.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodococcus erythropolis SK121]
          Length = 605

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 16/239 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                                +     + + S ++G +L +    ++     +  +    
Sbjct: 360 KDTFFDWDLYKKAFPDLLKTGLPNTLILALASGIIGTILGMLL-AVAGISRTRWLRWPAR 418

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y   F   GLP +V+I +          LG    + G T S  +     ALS   +A+I
Sbjct: 419 VYTDIF--RGLPAVVIILII--------GLGVGPIVKGITGSNPYWLGVAALSLLASAYI 468

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI RSG+ +V  GQ+EA+ ALG ++RK+  LV++PQ +R ++P L +Q+++L+K+SSL 
Sbjct: 469 GEIFRSGIQSVESGQLEASRALGFSYRKSMSLVVIPQGVRRVLPALMNQFISLIKDSSLI 528

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G      +L +VG  +  QTG ++  ++     YL+L+I +   +N ++ ++    
Sbjct: 529 YFLGLLVTQRELFAVGRDLNAQTG-SLSPLVAAGLFYLALTIPLTHLVNYIDNRLRTGR 586



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 1/188 (0%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  LA +  I  TI+G L+    +S  + + W  RVY ++FR +P +V+I  +   
Sbjct: 380 GLPNTLILALASGIIGTILGMLLAVAGISRTRWLRWPARVYTDIFRGLPAVVIILIIGLG 439

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           V  ++     S     G+   +   S     +  +    V S  L    +L  +      
Sbjct: 440 VGPIVKGITGSNPYWLGVAALSLLASAYIGEIFRSGIQSVESGQLEASRALGFSYRKSMS 499

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                + +  + +   +   +  +   +L Y L         F            +S  +
Sbjct: 500 LVVIPQGVRRV-LPALMNQFISLIKDSSLIYFLGLLVTQRELFAVGRDLNAQTGSLSPLV 558

Query: 272 ALSCYTAA 279
           A   +  A
Sbjct: 559 AAGLFYLA 566


>gi|319796472|ref|YP_004158112.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315598935|gb|ADU40001.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 256

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 107/255 (41%), Gaps = 10/255 (3%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           +    +          +   +       +T+       +     G+ L+L      RH  
Sbjct: 1   MEQPILLFGWFRWDILVEYKDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLAQPRHAP 60

Query: 213 EKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV------- 262
                   L + +T  +    G P  V I L +       +      +    +       
Sbjct: 61  WTWIARFFLRWPATVYVSFFRGTPLFVQILLIHFAVMPVFIHPTSGILIDGELARTLKQE 120

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               +S  +AL+  +AA+I+E+ R+G+ ++ RGQ +A  ++G +  +  R V+LPQA R 
Sbjct: 121 HGALISGVVALTLNSAAYISEVFRAGIQSISRGQFDAGRSIGFSPAQVMRYVVLPQAFRR 180

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PPL +  + LLK++SL  A+G A+L     T+     +  E  L    IY  +++++ 
Sbjct: 181 MLPPLGNNAIALLKDTSLVSAIGLAELAYAARTVAGAYARYWEPYLAISVIYWVMTLVLT 240

Query: 383 LFMNRLNAKIALKEK 397
             + RL  ++A  ++
Sbjct: 241 TMLRRLEHRLARSDR 255



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 10/93 (10%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVE 134
           Y      G   T  +    ++  +  G  +   RL+  +           + W   VYV 
Sbjct: 19  YKDLFWQGAWMTLRMTVVCVLLGSSWGLCLALARLAQPRHAPWTWIARFFLRWPATVYVS 78

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            FR  P  V I  ++ +V+ V   P   I++  
Sbjct: 79  FFRGTPLFVQILLIHFAVMPVFIHPTSGILIDG 111


>gi|170738225|ref|YP_001779485.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820413|gb|ACA94995.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 597

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 1/255 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ +  +  ++ S+L  P     +    FL+   LS    T+       VF FVLG  ++
Sbjct: 41  VLALVLIALTLYSLLGNPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGFVLGAFVA 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     SR         + L      ++  L    L  L   +    P      F   +T
Sbjct: 101 LARLSRSRLLSASAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTT 160

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAM
Sbjct: 161 DLISPFLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAM 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P   +  ++L K +S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 221 RAILPTAFNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 280

Query: 381 IALFMNRLNAKIALK 395
           ++    ++    A  
Sbjct: 281 LSAIQVQVERHYARG 295



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +   ++G  V   RLS ++L++     +V +FR+IP       + 
Sbjct: 75  LSGLARTLVLTLLGAVFGFVLGAFVALARLSRSRLLSASAWTFVWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTL 175


>gi|153010123|ref|YP_001371337.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562011|gb|ABS15508.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 510

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            ++      G+  +        + +  +   ++ + + G  L+L     ++         
Sbjct: 1   MNYDWHYALGLLADRDFWEASWVVIKLSLLSWLLAAIAGFGLAL-----AKQSSWSVING 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               YI  F    LP LVL+   Y L    PVL          +S  F +  IAL     
Sbjct: 56  PARAYIWFF--RSLPLLVLLIFIYSLPQVFPVLRTL-------LSNAFAAGLIALVISET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R GL+A+ +GQ+EA  ALGL+     RL+++PQA+R  +P ++++ + ++K +
Sbjct: 107 AYMAEIHRGGLLAIHKGQIEAGRALGLSFLGIQRLIVVPQAIRVSLPAMSNELVTIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +  A+++ VG  +  Q    +E + +  F Y+ +  +    ++ L  +  +  +
Sbjct: 167 SLVSVISLAEILLVGQRLYTQNFLVLETLTVVAFFYVLIVTLFDRGLSMLERRSDVIRR 225


>gi|323496903|ref|ZP_08101931.1| ABC-type amino acid transport system permease component [Vibrio
           sinaloensis DSM 21326]
 gi|323317977|gb|EGA70960.1| ABC-type amino acid transport system permease component [Vibrio
           sinaloensis DSM 21326]
          Length = 246

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 29/245 (11%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS------R 209
                       G+      L+    T+  +    +F+  LG+V++L A   S       
Sbjct: 22  WGWYVLDPSTEQGLTNIKFLLAGFNDTIQVSLLSMLFAMTLGLVIALLALAKSPFLQLLN 81

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + +  +++P+L +  ++ +G+PTL+ ++L +                       F + 
Sbjct: 82  RIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-----------------------FWAG 118

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA R I+PPL +
Sbjct: 119 VIALTVAESAFMAEVFRGGIQAISRGQHEAAESLGLNYWQKMRLVILPQAFRHILPPLGN 178

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++ +LK SSL   +G +DL      ++      +EI    +  YL L ++++  +  L 
Sbjct: 179 QFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVVEYLVLILLVSHAVRWLE 238

Query: 390 AKIAL 394
            +IA+
Sbjct: 239 KRIAI 243



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 39/70 (55%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L GF +T  ++   M+ A  +G ++    L+ +  +  + R+YVEV R+IP LV
Sbjct: 36  TNIKFLLAGFNDTIQVSLLSMLFAMTLGLVIALLALAKSPFLQLLNRIYVEVIRSIPVLV 95

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 96  LLLWVYYGMP 105


>gi|307708790|ref|ZP_07645252.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
 gi|307615156|gb|EFN94367.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus mitis NCTC 12261]
          Length = 275

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 7/207 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF + IV+ +     S     K+ + +  +++       L  L         +F
Sbjct: 76  LALALISFAIAIVIGIIFGMFS-VSPYKSLRVISEIFVDVIRGIPLMILAAFIFWGIPNF 134

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            + + GQ + I       +F++  IALS   AA+IAEIVR G+ AVP GQMEA+ +LG++
Sbjct: 135 IESITGQQSPIN------DFVAGTIALSLNAAAYIAEIVRGGIQAVPVGQMEASRSLGIS 188

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L   G  II +  Q+ ++
Sbjct: 189 YGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQTGKIIIARNYQSFKM 248

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I    YL +  ++     RL  +I 
Sbjct: 249 YAILAIFYLVIITLLTRLAKRLEKRIR 275



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +  I  ++V+V R IP +++  F+
Sbjct: 68  LLSGLGITLALALISFAIAIVIGIIFGMFSVSPYKSLRVISEIFVDVIRGIPLMILAAFI 127

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + + +         
Sbjct: 128 FWGIPNFIESITGQQSP 144


>gi|300119246|ref|ZP_07056940.1| amino acid ABC transporter, permease protein [Bacillus cereus SJ1]
 gi|298723354|gb|EFI64102.1| amino acid ABC transporter, permease protein [Bacillus cereus SJ1]
          Length = 232

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            + +  +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I
Sbjct: 18  IMQSSFMPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--II 74

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  I  S    A+ +EI+R+ +
Sbjct: 75  RGTPLLVQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASI 123

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 124 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 183

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 184 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 225



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 20  QSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 79

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 80  LVQLFIIFYGLPTLNVEVEPYTAAVIGFSLN 110


>gi|196037333|ref|ZP_03104644.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|196031575|gb|EDX70171.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
          Length = 214

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 110/221 (49%), Gaps = 14/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I 
Sbjct: 1   MQSSFMPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + + +   +  P L              + +  I  S    A+ +EI+R+ ++
Sbjct: 58  GTPLLVQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASIL 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++ 
Sbjct: 107 SIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMF 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I     + + +      IY  +  ++++    L  +
Sbjct: 167 RKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 207



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 2   QSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 62  LVQLFIIFYGLPTLNVEVEPYTAAVIGFSLN 92


>gi|315640218|ref|ZP_07895336.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter permease [Enterococcus italicus DSM 15952]
 gi|315484007|gb|EFU74485.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter permease [Enterococcus italicus DSM 15952]
          Length = 236

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 108/223 (48%), Gaps = 4/223 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L            + + + ++G ++ L AT + +       + L   Y    ++ G P 
Sbjct: 17  WLPTFWQGTIVTVALAIMTVIIGSLIGLLAT-IMKQSSFAPLRWLAKAYTQ--VVRGTPL 73

Query: 235 LVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+ + +  Y        +     +G    S EF++  +ALS  + A+I E++R GL ++ 
Sbjct: 74  LLQLFMWLYGFPIIGISIPPIPLLGDVFGSREFLTAVVALSINSGAYICELLRGGLESID 133

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEA  +LGL+  +  + +++PQA+R ++P L ++++ ++K SS+   VG  D++   
Sbjct: 134 KGQMEAGRSLGLSRWQTMKAIIIPQAVRVVLPGLGNEFIMMIKESSIVSVVGVFDVMYTY 193

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   T    E +++   IY  L+  +   M+ L  ++ + +
Sbjct: 194 NIVKASTYSIFEPLIVVGIIYFLLTAGLTSLMSMLEKRMHVYD 236



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 36/94 (38%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ ++    +      G + T  LA   +I  ++IG L    + S+   + W+ + Y +V
Sbjct: 8   VINFSKVVKWLPTFWQGTIVTVALAIMTVIIGSLIGLLATIMKQSSFAPLRWLAKAYTQV 67

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            R  P L+ +F        +        +L    
Sbjct: 68  VRGTPLLLQLFMWLYGFPIIGISIPPIPLLGDVF 101


>gi|293391094|ref|ZP_06635428.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951628|gb|EFE01747.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 227

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 13/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP--LLYISTFLIFGL 232
                   +D    + + SF  G++++L    +        G  +   L  I   +I G 
Sbjct: 13  FWPMLEAAIDKTIPLAIISFFAGLMIALGVAVIRTMPKSGIGLLVLQLLCRIYVSIIRGT 72

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + +                       F +  IA S    A+ +E +R+ ++++
Sbjct: 73  PMLVQIFIIFY-----------GLPEVGIKLDPFPTAIIAFSINIGAYASETIRAAILSI 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA+ ++G+ + +     ++PQA+R  +PPL++ +++ +K++SLA  V   ++  V
Sbjct: 122 PKGQWEASYSIGMNYFQTFIRTIMPQALRVSVPPLSNTFISNVKDTSLASLVLVTEMFRV 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              I  +  + I I      IY  + ++++    RL  +++ 
Sbjct: 182 AQNITAENYEFIMIYSEAALIYWCICLVLSFAQERLEKRLSR 223


>gi|76817664|ref|YP_337744.1| histidine transport system permease [Burkholderia pseudomallei
           1710b]
 gi|76582137|gb|ABA51611.1| histidine transport system permease protein [Burkholderia
           pseudomallei 1710b]
          Length = 636

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 4/225 (1%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYIST 226
           G +  N   S           +++    LG+   L     ++R    +       LY  T
Sbjct: 405 GQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWLY--T 462

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++  G P  V + L Y   +   V+    ++  S          +A +    A+  EI  
Sbjct: 463 YVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLD-SFFRSAMNCTLLAFTLNECAYATEIFA 521

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA     
Sbjct: 522 GAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTATV 581

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 582 PDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEAR 626



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 68/223 (30%), Gaps = 17/223 (7%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    L G   T WL    +     +   +   R S N+ V+    +
Sbjct: 404 IGQYWQNYLFSDGYR---LSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWL 460

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 461 YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 520

Query: 192 FSFV---------LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
              +          G+   +   +L       +     L   S  +I     L+L A   
Sbjct: 521 AGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVI-----LMLHATTL 575

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 P + +      S     F +  IA + Y     A I 
Sbjct: 576 AFTATVPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIW 618


>gi|229068107|ref|ZP_04201414.1| Amino acid ABC transproter, permease [Bacillus cereus F65185]
 gi|229077711|ref|ZP_04210341.1| Amino acid ABC transproter, permease [Bacillus cereus Rock4-2]
 gi|229176944|ref|ZP_04304339.1| Amino acid ABC transproter, permease [Bacillus cereus 172560W]
 gi|228606419|gb|EEK63845.1| Amino acid ABC transproter, permease [Bacillus cereus 172560W]
 gi|228705652|gb|EEL58008.1| Amino acid ABC transproter, permease [Bacillus cereus Rock4-2]
 gi|228714921|gb|EEL66789.1| Amino acid ABC transproter, permease [Bacillus cereus F65185]
          Length = 251

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I       L      +   +    +      L    +T+       V   ++G++ + F 
Sbjct: 3   ILCGAFHSLLKSIQYEVKRMFEIFISTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF- 61

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  + K   ++  +YI   +I G P +V IA+ Y              I    V  
Sbjct: 62  ----RISNNKVLNSIAHIYI--AIIRGTPLIVQIAILY------------FGITSVIVFS 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +
Sbjct: 104 PFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F
Sbjct: 164 PPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGVYYLVLVLLFTYF 223

Query: 385 MNRLNAKIALKE 396
           +N L  ++  KE
Sbjct: 224 VNLLEKRLQRKE 235



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  +Y+ + R  P +V I  L
Sbjct: 33  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHIYIAIIRGTPLIVQIAIL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 93  YFGITSVIVFSPFWAGAIALAIHNGAYI 120


>gi|20089671|ref|NP_615746.1| glutamine ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
 gi|19914598|gb|AAM04226.1| glutamine ABC transporter, permease protein [Methanosarcina
           acetivorans C2A]
          Length = 213

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 6/209 (2%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
              F  +LG + +         F   +   +P +    F I G P  V I L Y   +  
Sbjct: 9   AIFFGLILGTIEAFGKLSKRSVFRIPSIFRIPSIMYIDF-IRGTPLFVQILLFY---YSI 64

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L          V P         S  + A+ AEI+R+G+ +V RGQMEAA +LG+T  
Sbjct: 65  PGLIIGITGDPFRVDPILAGAVC--SINSGAYNAEIIRAGIKSVDRGQMEAARSLGMTEG 122

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A + V++PQA+R IIPPL ++++ LLK+SSL   +   +L   G   +++T  A    +
Sbjct: 123 QAMKEVVMPQAVRLIIPPLGNEFIALLKDSSLLAIISVHELAKNGMLYVSKTFAAFPTYI 182

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              F+YL+L++ I+  +  +  ++ + ++
Sbjct: 183 SVAFVYLALTMGISHILGYIERRLGVSDR 211


>gi|206580088|ref|YP_002238062.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935047|ref|YP_003439106.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290509109|ref|ZP_06548480.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
 gi|206569146|gb|ACI10922.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288889756|gb|ADC58074.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289778503|gb|EFD86500.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
          Length = 254

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 15/231 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYISTFL--IFGLPTLVL 237
           +T+       +   + G+ L L     + H   K   + L    +  ++    G P  V 
Sbjct: 22  MTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVRFYVSAFRGTPLFVQ 81

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPE------------FMSLYIALSCYTAAFIAEIV 285
           I + +       +  +   +    +               F+S  +A++    A+++EI 
Sbjct: 82  IMVVHFALVPLFINPRDGLLVTGGLMSADFARELRASYGAFLSCIVAITLNAGAYVSEIF 141

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++ +GQMEA+ ALG+   K  R V+LPQA R I+PPL +  + ++K+SSLA A+G
Sbjct: 142 RAGIQSIDKGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNAIAIVKDSSLASAIG 201

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ADL     T+        E  L    +Y  ++ ++A  +NRL  +    +
Sbjct: 202 LADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLVNRLEKRFGKSD 252



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVE 134
           Y    + G + T       +I  T+ G  +G GR++             LV +  R YV 
Sbjct: 12  YGPLFVDGALMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVRFYVS 71

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR  P  V I  ++ +++ +   P   +++  G+   +             + I   + 
Sbjct: 72  AFRGTPLFVQIMVVHFALVPLFINPRDGLLVTGGLMSADFARELRASYGAFLSCIVAITL 131

Query: 195 VLGIVLS 201
             G  +S
Sbjct: 132 NAGAYVS 138


>gi|42780022|ref|NP_977269.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42735940|gb|AAS39877.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 234

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            + +  +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 20  IMQSSFMPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--II 76

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  +  S    A+ +EI+R+ +
Sbjct: 77  RGTPLLVQLFIIF---YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASI 125

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 126 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 185

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 186 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 227



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 22  QSSFMPMLKEAVFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPL 81

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 82  LVQLFIIFYGLPTLNIEVEPYTAAVVGFSLN 112


>gi|229084062|ref|ZP_04216355.1| Amino acid ABC transporter [Bacillus cereus Rock3-44]
 gi|228699239|gb|EEL51931.1| Amino acid ABC transporter [Bacillus cereus Rock3-44]
          Length = 214

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 112/221 (50%), Gaps = 14/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    +      + T   + + +FV+GI+L++F T L+R  + +  + +  +Y+S  +I 
Sbjct: 1   MQASFMPMLEGALFTTIPLSIITFVIGIILAIF-TALARISNSRILQWIARIYVS--IIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + + +   +  P L              + +  I  S    A+ +EI+R+ ++
Sbjct: 58  GTPLLVQLFIIF---YGLPTLN--------IEIDPYPAAVIGFSLNVGAYASEIIRASIL 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA  +G+T+ +A + ++LPQA R  IPPL++ +++L+K++SLA  +   ++ 
Sbjct: 107 SIPKGQWEAAYTIGMTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMF 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I     + + +      IY  +  ++++    L  +
Sbjct: 167 RKAQEIAASNYEFLIVYFEAGLIYWVICFLLSIVQQILEKR 207



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 35/80 (43%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L+    +   I+       R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 13  LFTTIPLSIITFVIGIILAIFTALARISNSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 72

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    D       G  LN
Sbjct: 73  PTLNIEIDPYPAAVIGFSLN 92


>gi|317055330|ref|YP_004103797.1| polar amino acid ABC transporter inner membrane subunit
           [Ruminococcus albus 7]
 gi|315447599|gb|ADU21163.1| polar amino acid ABC transporter, inner membrane subunit
           [Ruminococcus albus 7]
          Length = 229

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 14/201 (6%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            ++++      +    K   AL  LY    +I G P +V + + Y + F           
Sbjct: 43  FIVAIIRCTYLKTGKMKIADALCRLY--LTVIRGTPMMVQLLIIYFVVF----------- 89

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             S    + +   IA    + A++AEIVR G++++  GQMEA  +LGL +R+    +++P
Sbjct: 90  -ASVNVSKTLVAIIAFGINSGAYVAEIVRGGIMSIDNGQMEAGRSLGLNYRQTMTSIIMP 148

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+++++P L ++ + LLK +S+A  +G  DL   G  I  QT      ++    IYL +
Sbjct: 149 QALKTVLPALANECIVLLKETSVAGYIGIYDLTKGGDEIRAQTYSPFLPLIAVAVIYLVM 208

Query: 378 SIMIALFMNRLNAKIALKEKK 398
            + +   + +L  +++  +++
Sbjct: 209 VMFLTFLVGKLERRLSANDRR 229


>gi|228963947|ref|ZP_04125082.1| Amino acid ABC transporter [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228795798|gb|EEM43271.1| Amino acid ABC transporter [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 226

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            + +  +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I
Sbjct: 12  IMQSSFMPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--II 68

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  +  S    A+ +EI+R+ +
Sbjct: 69  RGTPLLVQLFIIF---YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASI 117

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 118 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 177

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 178 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 219



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 14  QSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 73

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 74  LVQLFIIFYGLPTLNIEVEPYTAAVVGFSLN 104


>gi|75761726|ref|ZP_00741667.1| Cystine transport system permease protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74490780|gb|EAO54055.1| Cystine transport system permease protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 234

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            + +  +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I
Sbjct: 20  IMQSSFMPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--II 76

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  +  S    A+ +EI+R+ +
Sbjct: 77  RGTPLLVQLFIIF---YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASI 125

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 126 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 185

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 186 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 227



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 22  QSSFMPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 81

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 82  LVQLFIIFYGLPTLNIEVEPYTAAVVGFSLN 112


>gi|160879005|ref|YP_001557973.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium phytofermentans ISDg]
 gi|160427671|gb|ABX41234.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium phytofermentans ISDg]
          Length = 235

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 64/244 (26%), Positives = 116/244 (47%), Gaps = 16/244 (6%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           +S+    +         F+ +    +    + T   I  F+ ++G +L  F   + R  +
Sbjct: 1   MSIQIKMEEFYQRFVSNFIEDNRYMYLVRGLITTLVITFFAVMIGALLG-FIIAIIRSTY 59

Query: 213 EKTGKALPLLY---ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            KTGK   L +   I   +I G P +V + + Y + F            GS    +    
Sbjct: 60  SKTGKLRVLNFLCNIYITVIRGTPVVVQLLIIYFVIF------------GSVNINKIFVA 107

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +A    + A+++EIVRSG+++V  GQ EA  +LG  + +  RL++LPQA+++I+P L +
Sbjct: 108 VLAFGLNSGAYVSEIVRSGIMSVDEGQFEAGRSLGFNYNQTMRLIILPQAIKNILPALGN 167

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ LLK +S+   +   DL   G  I  +T  A   ++    IYL+L I+    +N L 
Sbjct: 168 EFIVLLKETSVCGFIALEDLTKAGDIIRGRTYDAFMPLIAVALIYLTLVIIFTKLVNYLE 227

Query: 390 AKIA 393
            ++ 
Sbjct: 228 RRLR 231



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVF 136
           + +    ++ G + T  + F  ++   ++G ++   R         +++ ++C +Y+ V 
Sbjct: 20  EDNRYMYLVRGLITTLVITFFAVMIGALLGFIIAIIRSTYSKTGKLRVLNFLCNIYITVI 79

Query: 137 RNIPPLVVIFFLYKSVL-SVLPIPDHSIVLPFGM 169
           R  P +V +  +Y  +  SV        VL FG+
Sbjct: 80  RGTPVVVQLLIIYFVIFGSVNINKIFVAVLAFGL 113


>gi|300309410|ref|YP_003773502.1| glutamine ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300072195|gb|ADJ61594.1| ABC-type glutamine transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 250

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 10/229 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLV 236
            +T+       +     G+VL +     +RH   K      + +   F +    G P  V
Sbjct: 22  WMTLKAAIICVIAGTCWGLVLGVGRLAEARHGFWKYFLCYCVQWPIRFYVSFLRGTPLFV 81

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTV-------SPEFMSLYIALSCYTAAFIAEIVRSGL 289
            I L +       +      I    +          F S  +A++  + A+++EI R+G+
Sbjct: 82  QILLIHFALMPMLINPSGGLILSGDLAREIRSHYGAFASAVLAITLNSGAYVSEIFRAGI 141

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ RGQ EA+ +LG+++    R V+LPQA R ++PPL +  + ++K+SSLA A+G A+L
Sbjct: 142 QSIDRGQSEASRSLGMSYLATLRRVVLPQAFRRMLPPLGNNAIAIVKDSSLASAIGLAEL 201

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                T+     +  E  L    IY  +++ ++  +  L A+    + +
Sbjct: 202 AYAARTVSGAYARYWEPYLTISVIYWLITLALSALVRHLEARYGKGDAR 250



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVYVE 134
           Y    + G   T   A   +I  T  G ++G GRL+  +           V W  R YV 
Sbjct: 13  YLPLFVEGTWMTLKAAIICVIAGTCWGLVLGVGRLAEARHGFWKYFLCYCVQWPIRFYVS 72

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
             R  P  V I  ++ +++ +L  P   ++L   +
Sbjct: 73  FLRGTPLFVQILLIHFALMPMLINPSGGLILSGDL 107


>gi|120602869|ref|YP_967269.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120563098|gb|ABM28842.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311233446|gb|ADP86300.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 262

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 115/229 (50%), Gaps = 15/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
               R L F    +    ++ VFS +  I + L    L R    +    +   Y+   ++
Sbjct: 49  DPYWRLLQFLPDGILVTFQVTVFSIICSIPIGLITG-LGRLSRNRGINLVASTYVE--VV 105

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV +   Y              +G     P+ ++  IALS    A++ E+ R+G+
Sbjct: 106 RGIPLLVQLFYIYY------------ALGRFLKVPDMLAAIIALSVCYGAYMGEVFRAGI 153

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EAA +LG    +   LV+LPQA R+I+PP+ ++++ +LK++SL   +  AD+
Sbjct: 154 EAIPKGQTEAARSLGFNRVETMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADI 213

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  G    +++ Q  E   +   +YL ++++++  ++ + A++   +++
Sbjct: 214 LRRGREFASESFQYFETYTMIALVYLLITLLLSKGVSIMEARLNYYDRR 262



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 80  TSDSSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +    Y   +     G + TF +    +I +  IG + G GRLS N+ +  +   YVEV 
Sbjct: 46  SQPDPYWRLLQFLPDGILVTFQVTVFSIICSIPIGLITGLGRLSRNRGINLVASTYVEVV 105

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R IP LV +F++Y ++   L +PD
Sbjct: 106 RGIPLLVQLFYIYYALGRFLKVPD 129


>gi|228919286|ref|ZP_04082656.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228840393|gb|EEM85664.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 251

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I       L      +   +    +      L    +T+       V   ++G++ + F 
Sbjct: 3   ILCGAFHSLLKSIQYEVKRMFEIFISTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF- 61

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  + K   ++  +YI   +I G P +V IA+ Y              I    V  
Sbjct: 62  ----RISNNKVLNSIAHIYI--AIIRGTPLIVQIAILY------------FGITSVIVFS 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +
Sbjct: 104 PFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F
Sbjct: 164 PPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGVYYLVLVLLFTYF 223

Query: 385 MNRLNAKIALKE 396
           +N L  ++  KE
Sbjct: 224 VNLLEKRLQRKE 235



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  +Y+ + R  P +V I  L
Sbjct: 33  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHIYIAIIRGTPLIVQIAIL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 93  YFGITSVIVFSPFWAGAIALAIHNGAYI 120


>gi|108802342|ref|YP_642539.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119871495|ref|YP_941447.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|126438322|ref|YP_001074013.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|108772761|gb|ABG11483.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. MCS]
 gi|119697584|gb|ABL94657.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
 gi|126238122|gb|ABO01523.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Mycobacterium sp. JLS]
          Length = 591

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 20/217 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V   VLG+ L++     SR       +    +Y   F   GLP +V+I L    
Sbjct: 373 LTVSAAVIGLVLGMALAVAGISRSRL-----LRWPARVYTDIF--RGLPEVVIILLI--- 422

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 LG    +GG T +  F     AL    AA+I EI RSG+ +V  GQ+EA+ ALG
Sbjct: 423 -----GLGVGPIVGGLTGNNPFPLGIAALGLMAAAYIGEIFRSGIQSVESGQLEASRALG 477

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQT 360
            ++  + RLV++PQ +R ++P L +Q+++LLK SSL   +G      +L  VG  +  QT
Sbjct: 478 FSYSSSMRLVVIPQGVRRVLPALMNQFISLLKASSLVYFLGLVADQRELFQVGRDLNAQT 537

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G ++  ++     YL L+I +   +N ++A++    +
Sbjct: 538 G-SLSPLVAAGLFYLLLTIPLTHLVNYVDARLRRGRR 573



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 9/191 (4%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  L  S  +   ++G  +    +S ++L+ W  RVY ++FR +P +V+I  +   
Sbjct: 366 GLPNTLILTVSAAVIGLVLGMALAVAGISRSRLLRWPARVYTDIFRGLPEVVIILLIGLG 425

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           V  ++     +   P G+       +     +  +    V S  L    +L  +  S   
Sbjct: 426 VGPIVGGLTGNNPFPLGIAALGLMAAAYIGEIFRSGIQSVESGQLEASRALGFSYSSSMR 485

Query: 212 HEKTG----KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                    + LP L      +    +LV     Y L         F            +
Sbjct: 486 LVVIPQGVRRVLPALMNQFISLLKASSLV-----YFLGLVADQRELFQVGRDLNAQTGSL 540

Query: 268 SLYIALSCYTA 278
           S  +A   +  
Sbjct: 541 SPLVAAGLFYL 551


>gi|225378641|ref|ZP_03755862.1| hypothetical protein ROSEINA2194_04309 [Roseburia inulinivorans DSM
           16841]
 gi|225209478|gb|EEG91832.1| hypothetical protein ROSEINA2194_04309 [Roseburia inulinivorans DSM
           16841]
          Length = 247

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 9/227 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L +   T+       + + ++G++L+L      +  +    K +  +YIS  LI G 
Sbjct: 15  PEILKYLPTTLILAVSSMIIALIIGMLLALI-----KTKNIPLLKQIAGVYIS--LIRGT 67

Query: 233 PTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P +V + + Y       K +  Q  +   S+ +  F+   IALS   +A+IAEI R  L 
Sbjct: 68  PVIVQLYIAYFGIPMITKYIYQQNGWNYQSSTTSGFVYAIIALSINESAYIAEIFRGALA 127

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQ+EAA A+G+T+ +    ++ P+ +   +P L + ++ L+K +SLA      ++ 
Sbjct: 128 SVNVGQIEAASAIGMTYFQTFCRIIFPEMLSVALPGLGNSFIGLIKGTSLAFVCAVVEMT 187

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + G  I  +T +  E+ +    IY  ++ +I   +  +  K+ + ++
Sbjct: 188 AQGKIIGGRTYRYFEVYVSLAIIYWVITFVIEQGIRLIEKKMQIPDQ 234



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 36/92 (39%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +  + +  S    IL     T  LA S MI A IIG L+   +     L+  I  VY+ +
Sbjct: 4   LFDFEAVLSQLPEILKYLPTTLILAVSSMIIALIIGMLLALIKTKNIPLLKQIAGVYISL 63

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            R  P +V ++  Y  +  +           +
Sbjct: 64  IRGTPVIVQLYIAYFGIPMITKYIYQQNGWNY 95


>gi|320330785|gb|EFW86759.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 222

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +  +Y+S   + G P LV + + Y                       
Sbjct: 42  ALMRLSRLKLVNWIARIYVSF--LRGTPLLVQLFVIYY-----------GLPEMGIQLEP 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +P
Sbjct: 89  LSAALIGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   
Sbjct: 149 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQ 208

Query: 386 NRLNAKIALKE 396
           N+L A++   +
Sbjct: 209 NKLEARVNRHD 219



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  KLV WI R+YV   R  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRLKLVNWIARIYVSFLRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +       G  LN 
Sbjct: 76  YYGLPEMGIQLEPLSAALIGFSLNM 100


>gi|313110114|ref|ZP_07796016.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
 gi|310882518|gb|EFQ41112.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
          Length = 320

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 15/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             + T   + + S  +G+ + L A  L R     T   L  +Y+   L+ G P LV I +
Sbjct: 120 WGLWTTLWLSLVSGAIGLAIGLVAG-LCRLSENPTLHDLSTIYVE--LVRGTPLLVQIFI 176

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y             FIG         +   AL+ +T A++AEI+R+G+ ++ RGQ EAA
Sbjct: 177 FY------------FFIGTVLNLSREFAGVAALALFTGAYVAEIIRAGVQSIARGQNEAA 224

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL   ++ R V+LPQA + ++PPL  Q+++L+K++SL   +   +L   G   I  +
Sbjct: 225 RSLGLNAGQSMRYVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTS 284

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               EI      +YL L++ ++   +RL  ++   +
Sbjct: 285 FSTFEIWFCVAALYLLLNLPLSHMASRLERRLGQSD 320



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T WL+         IG + G  RLS N  +  +  +YVE+ R  P LV IF  
Sbjct: 118 LLWGLWTTLWLSLVSGAIGLAIGLVAGLCRLSENPTLHDLSTIYVELVRGTPLLVQIFIF 177

Query: 149 YKSV 152
           Y  +
Sbjct: 178 YFFI 181


>gi|325526518|gb|EGD04078.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 297

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 5/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V +  LGIVL +  T + R        A+   YI  F   G P ++ + L + L  
Sbjct: 82  IVMTVLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYIWLF--RGTPVILQLLLWFNLAL 138

Query: 247 DKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P L            V   F++  + L     A+ +E+VR+GL++V  GQ EAA ++G
Sbjct: 139 VFPTLGIPGIAEFRTVDVMTPFLAALLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIG 198

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V +A+++     I     + I
Sbjct: 199 MPRLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVI 258

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E++++    YL++  +++L   R+  + A    +
Sbjct: 259 ELLIVAGIWYLAVVTVLSLAQARVERRFARGAGR 292



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A AIL G  NT  +    M    ++G +    RLS+N ++  I + Y+ +FR  P ++ +
Sbjct: 71  ARAILTGLGNTIVMTVLAMTLGIVLGVVTAVMRLSSNPVLGAIAQGYIWLFRGTPVILQL 130

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 131 LLWFNLAL 138


>gi|255994765|ref|ZP_05427900.1| amino acid ABC transporter, permease protein [Eubacterium saphenum
           ATCC 49989]
 gi|255993478|gb|EEU03567.1| amino acid ABC transporter, permease protein [Eubacterium saphenum
           ATCC 49989]
          Length = 220

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 18/228 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+       VF+  LGI  +L           K  K L   Y+  F   
Sbjct: 8   YMPLLLEGAKITVLLCVITLVFALPLGIPFALGV-----RSRIKPIKYLCECYVLIF--R 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   Y L            +       EF +   A     AA+ AEI R G+ 
Sbjct: 61  GTPLLLQLWFFYYLF----------PMYLGIQVDEFETAAFAFVLNYAAYFAEIYRGGIN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EAA ALG+   +  + ++LPQAM++++PP+ ++ + L+K+++LA A+   D++
Sbjct: 111 SIDKGQYEAAFALGVPRWRTMKDIILPQAMKAMLPPIANEAIVLIKDTALASAITLMDIM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V   ++++    I+I L    IYL L+ +  +   R+  + +   ++
Sbjct: 171 KVSQAVVSRNSD-IKIFLYAAVIYLILTGITTIIAKRIEKRFSRHVQR 217



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  L    ++ A  +G     G  S  K + ++C  YV +FR  P L+ 
Sbjct: 8   YMPLLLEGAKITVLLCVITLVFALPLGIPFALGVRSRIKPIKYLCECYVLIFRGTPLLLQ 67

Query: 145 IFFLYKSVL 153
           ++F Y    
Sbjct: 68  LWFFYYLFP 76


>gi|123442745|ref|YP_001006722.1| putative amino-acid ABC transporter (permease) [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122089706|emb|CAL12558.1| putative amino-acid ABC transporter (permease) [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|318605288|emb|CBY26786.1| cystine ABC transporter, permease protein [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 220

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 107/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F   LG +L++           +  + LPL
Sbjct: 2   QESIQLVLDSAPFLLKGAWFTLQLSLGGMFFGLALGFMLAMM----------RLSRFLPL 51

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             +S F +       LIA  + +++  P                  +  I LS  TAA+ 
Sbjct: 52  SLLSRFYVSIFRGTPLIAQLFMIYYGLPQF--------GIELDPMPAALIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +    V+LPQA R+ +PPL + ++ L+K++SLA
Sbjct: 104 SETLRAAISSIEKGQWEAAASIGMTRWQTLYRVILPQAGRTALPPLGNSFIGLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      + ++T +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 164 ATIQVPELFRQAQLVTSRTLEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE 220



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM     +G ++   RLS    ++ + R YV +FR  P +  +F +
Sbjct: 15  LLKGAWFTLQLSLGGMFFGLALGFMLAMMRLSRFLPLSLLSRFYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPMPAALIGLSLN 98


>gi|260461455|ref|ZP_05809702.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259032525|gb|EEW33789.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 226

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 106/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SFVLG+ + L A  L R F  K   AL   Y+  F   G P LV + 
Sbjct: 17  WAALIFTVPLTLLSFVLGLTVGLGA-ALGRLFGPKPLVALVRFYVWIF--RGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  LIFY-----------GLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G+T  +A R  +LPQA R  +PPL++ +++L+K++SLA A+   ++      I+  
Sbjct: 123 AYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    +YL++S +++    RL  ++   
Sbjct: 183 TYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRY 218



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +    + T  L     +    +G     GRL   K +  + R YV +FR  P LV +F +
Sbjct: 16  LWAALIFTVPLTLLSFVLGLTVGLGAALGRLFGPKPLVALVRFYVWIFRGTPLLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + SV  + D       G  LN
Sbjct: 76  FYGLPSVGILLDAFTAALIGFTLN 99


>gi|158319771|ref|YP_001512278.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158139970|gb|ABW18282.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 266

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 104/228 (45%), Gaps = 13/228 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYI 224
            +G            +++       V   + GIV ++    R  +    K   +   +YI
Sbjct: 12  DYGPMFARGAWVTLYISITGTMVGSVIGLLTGIVRTIPMPDRGFKRVLLKVVNSFISIYI 71

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P +V   + Y                G  ++  F +L I  S  T A+++EI
Sbjct: 72  ECF--RGTPMIVQAMVIYY---------GVAQAFGIQMNRTFAALIIV-SINTGAYMSEI 119

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR G++++ +GQ EAA A+G+ H +    V+LPQ +R+I+P   ++++  +K++S+   +
Sbjct: 120 VRGGILSIDKGQFEAAEAIGMNHIQTMINVVLPQVIRNILPATGNEFVINIKDTSVLNVI 179

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +L     +I   T +  E  LI   IYL+++I+I   +  +  ++
Sbjct: 180 SVTELFFQTKSISGATFKFFEPYLITSVIYLTMTIVITRILRYIERRM 227



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 10/82 (12%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVE 134
           Y      G   T +++ +G +  ++IG L G  R              K+V     +Y+E
Sbjct: 13  YGPMFARGAWVTLYISITGTMVGSVIGLLTGIVRTIPMPDRGFKRVLLKVVNSFISIYIE 72

Query: 135 VFRNIPPLVVIFFLYKSVLSVL 156
            FR  P +V    +Y  V    
Sbjct: 73  CFRGTPMIVQAMVIYYGVAQAF 94


>gi|238791255|ref|ZP_04634894.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia intermedia ATCC 29909]
 gi|238729388|gb|EEQ20903.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia intermedia ATCC 29909]
          Length = 255

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 21/252 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F   +                K  +   +LG    L    L R      G   P+LY   
Sbjct: 4   FRWEIIQEYAPLFMDGAWMTIKCTIICVILGTTWGLTLG-LGRLAQAPHGIWKPVLYYFV 62

Query: 227 FL--------IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EF 266
                     I G P  V I + +       +  +   +  + +               F
Sbjct: 63  QWPVRIYISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAF 122

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++PP
Sbjct: 123 LSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPP 182

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L + 
Sbjct: 183 LGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLSLLVR 242

Query: 387 RLNAKIALKEKK 398
            +  +    + +
Sbjct: 243 HMEKRFGKSDSR 254



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVY 132
             YA   + G   T       +I  T  G  +G GRL+              V W  R+Y
Sbjct: 10  QEYAPLFMDGAWMTIKCTIICVILGTTWGLTLGLGRLAQAPHGIWKPVLYYFVQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +   R  P  V I  ++ +++ +   P   I++  G+  ++      +      + +   
Sbjct: 70  ISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCVVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|228956816|ref|ZP_04118601.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228802857|gb|EEM49690.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 251

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I       L      +   +    +      L    +T+       V   ++G++ + F 
Sbjct: 3   ILCGAFHSLLKSIQYEVKRMFEIFISTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF- 61

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  + K   ++  +YI   +I G P +V IA+ Y              I    V  
Sbjct: 62  ----RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVIVFS 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +
Sbjct: 104 PFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F
Sbjct: 164 PPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGAYYLVLVLLFTYF 223

Query: 385 MNRLNAKIALKE 396
           +N L  ++  KE
Sbjct: 224 VNLLEKRLQRKE 235



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 33  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 93  YFGITSVIVFSPFWAGAIALAIHNGAYI 120


>gi|196046952|ref|ZP_03114172.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|229154561|ref|ZP_04282678.1| Amino acid ABC transporter [Bacillus cereus ATCC 4342]
 gi|229183181|ref|ZP_04310411.1| Amino acid ABC transporter [Bacillus cereus BGSC 6E1]
 gi|196022181|gb|EDX60868.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|228600320|gb|EEK57910.1| Amino acid ABC transporter [Bacillus cereus BGSC 6E1]
 gi|228628959|gb|EEK85669.1| Amino acid ABC transporter [Bacillus cereus ATCC 4342]
          Length = 209

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 108/216 (50%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P L
Sbjct: 1   MPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +   +  P L              + +  I  S    A+ +EI+R+ ++++P+G
Sbjct: 58  VQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKG 106

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 107 QWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQE 166

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I     + + +      IY  +  ++++    L  +
Sbjct: 167 IAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 202



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 8   VFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 67

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 68  PTLNVEVEPYTAAVIGFSLN 87


>gi|30260992|ref|NP_843369.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47777862|ref|YP_017493.2| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183837|ref|YP_027089.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|167635893|ref|ZP_02394201.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|167638970|ref|ZP_02397244.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|170687533|ref|ZP_02878749.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|170708257|ref|ZP_02898702.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|177653846|ref|ZP_02935918.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|229602267|ref|YP_002865432.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|30254441|gb|AAP24855.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47551567|gb|AAT29968.2| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177764|gb|AAT53140.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|167513100|gb|EDR88472.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|167528710|gb|EDR91469.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|170126778|gb|EDS95660.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|170668346|gb|EDT19093.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|172081074|gb|EDT66151.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|229266675|gb|ACQ48312.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
          Length = 235

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 21  IMQTSFMPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--II 77

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  I  S    A+ +EI+R+ +
Sbjct: 78  RGTPLLVQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASI 126

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 127 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 186

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 187 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 228



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 34  VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 93

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 94  PTLNVEVEPYTAAVIGFSLN 113


>gi|332161362|ref|YP_004297939.1| putative amino-acid ABC transporter [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665592|gb|ADZ42236.1| putative amino-acid ABC transporter [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859509|emb|CBX69852.1| inner membrane amino-acid ABC transporter permease protein yecS
           [Yersinia enterocolitica W22703]
          Length = 220

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L     T+  +     F   LG +L++           +  + LPL
Sbjct: 2   QESIQLVLDSAPFLLKGAWFTLQLSLGGMFFGLALGFMLAMM----------RLSRFLPL 51

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             +S F +       LIA  + +++  P                  +  I LS  TAA+ 
Sbjct: 52  SLLSRFYVSIFRGTPLIAQLFMIYYGLPQF--------GIELDPMPAALIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +    V+LPQA RS +PPL + ++ L+K++SLA
Sbjct: 104 SETLRAAISSIEKGQWEAAASIGMTRWQTLYRVILPQAGRSALPPLGNSFIGLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      + ++T +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 164 ATIQVPELFRQAQLVTSRTLEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE 220



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM     +G ++   RLS    ++ + R YV +FR  P +  +F +
Sbjct: 15  LLKGAWFTLQLSLGGMFFGLALGFMLAMMRLSRFLPLSLLSRFYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPMPAALIGLSLN 98


>gi|222151671|ref|YP_002560827.1| ABC-type amino acid transport system permease component
           [Macrococcus caseolyticus JCSC5402]
 gi|222120796|dbj|BAH18131.1| ABC-type amino acid transport system permease component
           [Macrococcus caseolyticus JCSC5402]
          Length = 242

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 101/193 (52%), Gaps = 3/193 (1%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K  +++  +Y+S  +I G P LV + + +    +   L   N      ++P 
Sbjct: 53  ALMRVSRNKFARSIARIYVS--IIRGTPMLVQLFIIFYGIPEVGRLITGNPDIKLNIAP- 109

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            ++  I LS    A+ +EI+R G++++P GQ EAA ++G++     + ++LPQA+R  IP
Sbjct: 110 VVAAIIGLSLNVGAYASEIIRGGILSIPDGQKEAAYSIGMSEWMTMKRIVLPQAIRVSIP 169

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +L+L+K++SL   +  A++      +   T + + I ++   +Y  +  +I++  
Sbjct: 170 ALGNTFLSLIKDTSLLGFILVAEMFRKAQEVAATTYEFLSIYVLVGLMYWIVCFIISVVQ 229

Query: 386 NRLNAKIALKEKK 398
            +  ++I  K ++
Sbjct: 230 GQYESRIERKYQR 242


>gi|89258356|gb|ABD65399.1| putative amino acid ABC transporter permease protein [Ochrobactrum
           anthropi]
          Length = 254

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 14/225 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             R L F         +I   + +LG+ ++       R       + L   Y+S F   G
Sbjct: 6   MQRVLPFFLEAAWVTVQISALALILGLAVAAILVA-GRLSRSPILRGLAAAYVSVF--RG 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV + +   L+F  P +       G  + P F +  I L     A+++E +R  + +
Sbjct: 63  TPCLVQLFI---LYFGGPQI-------GINLEP-FAAGVIGLGLNIGAYMSESIRGAIQS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ EAA ++G    +  R V+LPQA R +I PL    + LLK S+L   +   +L  
Sbjct: 112 VDRGQSEAARSIGFGRGQTMRFVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                I  T +  EI  +   +Y+ +  ++A  ++ L+      E
Sbjct: 172 TAQRFIGSTYKPFEIFGVAAVLYMIIIYIVARGVDLLDKASRRSE 216



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 9/108 (8%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q ++P+          L     T  ++   +I    +  ++ AGRLS + ++  + 
Sbjct: 3   FALMQRVLPF---------FLEAAWVTVQISALALILGLAVAAILVAGRLSRSPILRGLA 53

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
             YV VFR  P LV +F LY     +    +       G+ LN     
Sbjct: 54  AAYVSVFRGTPCLVQLFILYFGGPQIGINLEPFAAGVIGLGLNIGAYM 101


>gi|30019028|ref|NP_830659.1| cystine transport system permease protein [Bacillus cereus ATCC
           14579]
 gi|29894570|gb|AAP07860.1| Cystine transport system permease protein [Bacillus cereus ATCC
           14579]
          Length = 234

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 20  IMQTSFMPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--II 76

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  +  S    A+ +EI+R+ +
Sbjct: 77  RGTPLLVQLFIIF---YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASI 125

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 126 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 185

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 186 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 227



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 33  VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 92

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 93  PTLNIEVEPYTAAVVGFSLN 112


>gi|322806285|emb|CBZ03853.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Clostridium botulinum H04402 065]
          Length = 162

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 90/161 (55%), Gaps = 2/161 (1%)

Query: 239 ALKYQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              Y +++  P +G          +  P+F +  +ALS  + A++AEI+R+G+ AV +GQ
Sbjct: 1   MQLYIIYYGLPTIGIKFPEVPILGSNFPDFFAGILALSINSGAYVAEIIRAGIQAVDKGQ 60

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           MEAA +LG++   A R V++PQA ++I+P L ++++ ++K SS+   +G  +L+    T+
Sbjct: 61  MEAARSLGMSESMAMRNVIIPQAFKNILPALGNEFITIIKESSIVSIIGIHELMYNADTV 120

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +  E +L+   +Y  L+  ++  +     ++ + ++
Sbjct: 121 RGNIFRPFEPLLVAALMYFILTFTLSKLLGVAERRMRVSDR 161


>gi|238758198|ref|ZP_04619377.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia aldovae ATCC 35236]
 gi|238703528|gb|EEP96066.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia aldovae ATCC 35236]
          Length = 255

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 21/234 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--------IFGLPTLV 236
              K  +   +LG    L    L R      G   P+LY             I G P  V
Sbjct: 22  MTIKCTIICVILGTTWGLTLG-LGRLAQAPHGVWKPVLYYFVQWPVRIYISAIRGTPLFV 80

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAAFIAEI 284
            I + +       +  +   +  + +               F+S  +A++    A+++EI
Sbjct: 81  QIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCVVAITLNAGAYVSEI 140

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++PPL +  + ++K+SSLA A+
Sbjct: 141 FRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPPLGNNAIAIVKDSSLASAI 200

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ADL     T+        E  L    +Y  ++ +++L +  +  +    + +
Sbjct: 201 GLADLAYAARTVSGAYATYWEPYLAISVVYWVITFLLSLLVRHMEKRFGKSDSR 254



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVY 132
             YA   + G + T       +I  T  G  +G GRL+              V W  R+Y
Sbjct: 10  QEYAPLFMDGALMTIKCTIICVILGTTWGLTLGLGRLAQAPHGVWKPVLYYFVQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +   R  P  V I  ++ +++ +   P   I++  G+  ++      +      + +   
Sbjct: 70  ISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCVVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|320533838|ref|ZP_08034423.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320133933|gb|EFW26296.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 321

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 7/215 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLI----A 239
               +   +  +GIVL++  T + R       + + L Y+  F    + T LV      A
Sbjct: 69  WTLLLTFMAMAIGIVLAV-TTAILRQSSNPVLRWVALAYLWFFRGTPIYTQLVFWGALSA 127

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L  +L    P   +      + V   F++  + L     A+++EIVRSGL +V +GQ EA
Sbjct: 128 LYQKLSLGIPFGPELLTFKTTAVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEA 187

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIIN 358
           A ALG++  +  R ++LPQAMR I+PP  ++ +++LK +SL +AV F  DL  V  +  +
Sbjct: 188 AGALGMSKSQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNSYAS 247

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            T Q I ++L+    Y+ ++ ++ +  + +     
Sbjct: 248 LTYQIIPLLLVAAIWYIVITSILMVGQHYIERYYG 282



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 7/107 (6%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +     T  L F  M    ++       R S+N ++ W+   Y+  FR  P    + F  
Sbjct: 64  VKAVGWTLLLTFMAMAIGIVLAVTTAILRQSSNPVLRWVALAYLWFFRGTPIYTQLVFWG 123

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                          L  G+      L+F T  + T     V    +
Sbjct: 124 ALSALYQK-------LSLGIPFGPELLTFKTTAVFTPFVAAVLGLGI 163


>gi|153953604|ref|YP_001394369.1| amino acid ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146346485|gb|EDK33021.1| Amino acid ABC transporter, permease protein [Clostridium kluyveri
           DSM 555]
          Length = 216

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           ++ V + +LG +L +F   L +       + +  +Y   F   G P L
Sbjct: 10  LPILLKGSVMTIELTVITLILGTILGIFL-ALLKLSKNMVLRIISSIYTWVF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y             F+G       F +  + L+    A++AEI+R G+ ++ +G
Sbjct: 67  LQLFFFYY---------GLPFVGIELK--PFSAAVLGLALNCGAYMAEIIRGGIQSIHKG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG ++ +  R ++LPQ  + IIPP+ ++++ +LK++SL   +   +L+     
Sbjct: 116 QFEAAKALGFSYGETMRRIILPQTWKVIIPPVGNEFIAILKDTSLVSTIAMVELMRSAQQ 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I   +   I +      +YL ++ M     +    K+A+ 
Sbjct: 176 IYASSFDPISVFFTAAVLYLIMTTMFTTVFSAFEKKLAVY 215



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L    +I  TI+G  +   +LS N ++  I  +Y  VFR  P L+ +FF 
Sbjct: 13  LLKGSVMTIELTVITLILGTILGIFLALLKLSKNMVLRIISSIYTWVFRGTPLLLQLFFF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  V            G+ LN
Sbjct: 73  YYGLPFVGIELKPFSAAVLGLALN 96


>gi|295396899|ref|ZP_06807023.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Aerococcus viridans ATCC 11563]
 gi|294974833|gb|EFG50536.1| glutamine ABC superfamily ATP binding cassette transporter, binding
           protein [Aerococcus viridans ATCC 11563]
          Length = 484

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 99/209 (47%), Gaps = 19/209 (9%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            A + + S  +G ++ +      R F  K  +A+   Y+  F++ G P ++ + + +   
Sbjct: 295 FAIVLIISVPIGFLIGIL-----RVFGPKWLQAIIEAYV--FIMRGSPLMLQLMVIF--- 344

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P +              F +  +A     AA+ AEI R G+ AVP GQ E+   LG+
Sbjct: 345 FGLPYI--------GIAMDRFPAAVLAYVINYAAYFAEIFRGGISAVPDGQYESISVLGI 396

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  R ++LPQ +  ++P + ++ ++L+K++SL   +G  +L+  G  I   T  ++ 
Sbjct: 397 GKMRGFRRIILPQVVNIVLPSIGNEVISLVKDTSLVYVIGLGELLRAGN-IAANTYASLA 455

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             L+   IYL ++ ++   + +   ++  
Sbjct: 456 PYLVAGAIYLIVTAVLTFVLRKFENQLKW 484



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 30/87 (34%)

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
              +I +  IG L+G  R+   K +  I   YV + R  P ++ +  ++  +  +    D
Sbjct: 296 AIVLIISVPIGFLIGILRVFGPKWLQAIIEAYVFIMRGSPLMLQLMVIFFGLPYIGIAMD 355

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                     +N             +A
Sbjct: 356 RFPAAVLAYVINYAAYFAEIFRGGISA 382


>gi|217967440|ref|YP_002352946.1| polar amino acid ABC transporter, inner membrane subunit
           [Dictyoglomus turgidum DSM 6724]
 gi|217336539|gb|ACK42332.1| polar amino acid ABC transporter, inner membrane subunit
           [Dictyoglomus turgidum DSM 6724]
          Length = 218

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 112/232 (48%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    + +         ++ V S   GI+L LF   L+R       +    +Y+
Sbjct: 1   MDFNINIFIESIPYLLKGAVVTLRLSVISVAFGIILGLFLG-LARISKNYLLRIPSTIYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P L+ + + Y        L  F    G+       +  + LS  +AA+  EI
Sbjct: 60  E--VIRGTPLLMQLLIIYY------ALPSFGINLGAI-----TAAIVGLSLNSAAYTGEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+ ++ +GQMEAA +LG+T+ +A R ++LPQA R I+PPLT++++++LK SSLA  +
Sbjct: 107 FRSGIQSIDKGQMEAARSLGMTYFQAMRYIILPQAFRRILPPLTNEFVSMLKESSLASTL 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+  G  I+          L    IYL +++ +      L  ++   +
Sbjct: 167 AVTELLRAGREIVAWKANVFSPFLGVTLIYLLMTLPLTRLSVWLEKRLKTGD 218



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+   +    I+G  +G  R+S N L+     +YVEV R  P L+ +  
Sbjct: 14  YLLKGAVVTLRLSVISVAFGIILGLFLGLARISKNYLLRIPSTIYVEVIRGTPLLMQLLI 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y ++ S             G+ LN
Sbjct: 74  IYYALPSFGINLGAITAAIVGLSLN 98


>gi|254670614|emb|CBA06589.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha153]
          Length = 227

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  FV   V+ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 26  PLAAASFVIGMVIAVAVALVRIMPAGGIARKILLKLVEFYIS--VIRGTPLLVQLVIVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 84  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 133 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 193 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224


>gi|227872730|ref|ZP_03991055.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227841425|gb|EEJ51730.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 229

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 16/214 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQ 243
             I  F+ V+G+ L      + R  +++TGK      I  F   ++ G P ++ + + Y 
Sbjct: 28  LIITFFALVIGVALGFIIG-MVRSTYDRTGKGKIANGICQFYLTIMRGTPAVIQLMIFYY 86

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F             S +        IA    +AA++AEI+RSG++++P+GQMEA  +L
Sbjct: 87  CIF------------TSRIFSGVFVGIIAFGLNSAAYVAEIIRSGIMSIPKGQMEAGRSL 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G ++ +  R +++PQA+R+++P + ++++ L+K +++A  V   DL   G  + ++T  +
Sbjct: 135 GFSYGETMRYIIMPQAVRNVLPAIFNEFIVLIKETAVAGYVAVQDLTKAGDIVRSRTYDS 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L    IYL L++  +    ++      KE+
Sbjct: 195 WTPLLTVALIYLILTMFFSFLEKKMEEAFQRKER 228



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 33/93 (35%), Gaps = 5/93 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG-----RLSANKLV 125
            + + +             L G  NT  + F  ++    +G ++G       R    K+ 
Sbjct: 2   SLQEHLYMNLVQDKRYLYFLEGLKNTLIITFFALVIGVALGFIIGMVRSTYDRTGKGKIA 61

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
             IC+ Y+ + R  P ++ +   Y  + +    
Sbjct: 62  NGICQFYLTIMRGTPAVIQLMIFYYCIFTSRIF 94


>gi|49480129|ref|YP_035105.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331685|gb|AAT62331.1| amino acid ABC transporter, permease [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 226

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 12  IMQTSFMPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--II 68

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  +  S    A+ +EI+R+ +
Sbjct: 69  RGTPLLVQLFIIF---YGLPTLN--------VEVEPYTAAVVGFSLNVGAYASEIIRASI 117

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 118 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 177

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 178 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 219



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 25  VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 84

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 85  PTLNVEVEPYTAAVVGFSLN 104


>gi|75759592|ref|ZP_00739679.1| Cystine transport system permease protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74492927|gb|EAO56056.1| Cystine transport system permease protein [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 251

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I       L      +   +    +      L    +T+       V   ++G++ + F 
Sbjct: 3   ILCGAFHSLLKSIQYEVKRMFEIFISSYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF- 61

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  + K   ++  +YI   +I G P +V IA+ Y              I    V  
Sbjct: 62  ----RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFT 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +
Sbjct: 104 PFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F
Sbjct: 164 PPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGAYYLVLVLLFTYF 223

Query: 385 MNRLNAKIALKE 396
           +N L  ++  KE
Sbjct: 224 VNLLEKRLQRKE 235



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 33  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 93  YFGITSVVVFTPFWAGAIALAIHNGAYI 120


>gi|330871999|gb|EGH06148.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 165

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 11/169 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L  G P LV + + Y   +  P +       G  + P   +  I  S   AA+  EI+R+
Sbjct: 5   LFRGTPLLVQLFVIY---YGLPEM-------GIQLEP-LSAALIGFSLNMAAYACEILRA 53

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +V RGQ EAA ++G+T  +  R  +LPQA R+ +PPL + +++L+K+++LA  +   
Sbjct: 54  AISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALPPLGNSFISLVKDTALAATIQVP 113

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L      I  +T +   + L    IY  L+  ++   N+L A++   +
Sbjct: 114 ELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQNKLEARVNRHD 162


>gi|229056620|ref|ZP_04196026.1| Amino acid ABC transporter [Bacillus cereus AH603]
 gi|228720689|gb|EEL72247.1| Amino acid ABC transporter [Bacillus cereus AH603]
          Length = 225

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 25  FTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 80

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 81  --YGLPTLN--------IEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 131 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY  +  ++++    L  +
Sbjct: 191 LIVYFEAGLIYWVICFLLSIVQQILEKR 218



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 41/91 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            +S+A  +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 13  QTSFAPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 72

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 73  LVQLFIIFYGLPTLNIEVEPYTAAVIGFSLN 103


>gi|330886120|gb|EGH20021.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 200

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +  +Y+S F   G P LV + + Y   +  P L       G  + P 
Sbjct: 20  ALMRLSRLKLVNWIARIYVSFF--RGTPLLVQLFVIY---YGLPEL-------GIQLEP- 66

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +P
Sbjct: 67  LSAALIGFSLNMAAYACEILRAAISSVERGQWEAAASIGMTRWQTMRRAILPQAARTALP 126

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   
Sbjct: 127 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQ 186

Query: 386 NRLNAKIALKE 396
           N+L A++   +
Sbjct: 187 NKLEARVNRHD 197



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 37/78 (47%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T +L+  GM    ++G  +   RLS  KLV WI R+YV  FR  P LV +F +Y  +  +
Sbjct: 1   TVFLSLGGMFFGLLLGFGLALMRLSRLKLVNWIARIYVSFFRGTPLLVQLFVIYYGLPEL 60

Query: 156 LPIPDHSIVLPFGMFLNN 173
               +       G  LN 
Sbjct: 61  GIQLEPLSAALIGFSLNM 78


>gi|170016705|ref|YP_001727624.1| amino acid ABC transporter periplasmic protein [Leuconostoc citreum
           KM20]
 gi|169803562|gb|ACA82180.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Leuconostoc citreum KM20]
          Length = 479

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 17/219 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+       V + + G +L +           K  +      +ST +I+    
Sbjct: 278 FLKGLWQTVQLTVIAIVLASIWGTLLGVMG-----VSELKWVRG-----VSTTIIYIFRG 327

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+ L + ++   P +            P F +  I L     A+    VR G  AV R
Sbjct: 328 LPLMVLAFFIYIGLPGVTG-------VKIPAFTAGIITLILNEGAYTGAFVRGGFEAVER 380

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LGL +  A R V++PQ +R ++P   +Q++  LK++S+  A+G  +L   G 
Sbjct: 381 GQMEAARSLGLNYNSAMRKVIMPQGLRIMVPSFINQFIITLKDTSILSAIGLLELTQTGT 440

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I+ +  Q   +  I   IYL +  ++    N +  KI 
Sbjct: 441 LIVARNSQGFRVWAIVAVIYLIVITLLTWLSNWVEKKIK 479



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 34/66 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  L    ++ A+I GTL+G   +S  K V  +    + +FR +P +V+ FF
Sbjct: 277 AFLKGLWQTVQLTVIAIVLASIWGTLLGVMGVSELKWVRGVSTTIIYIFRGLPLMVLAFF 336

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 337 IYIGLP 342


>gi|330429518|gb|AEC20852.1| polar amino acid ABC transporter, inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 507

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 14/240 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            D      + +   +            +   ++ +  +G VL+L     ++     +   
Sbjct: 1   MDFDWTYTYSLLWESDFWRACWTVAQLSVSAWLIAGAVGFVLAL-----AKQSRIASLNW 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +YI  F    L           L      L Q        +S  F +  IAL     
Sbjct: 56  PARVYIWFFRSLPLLV---------LLVFVYNLPQVFPASSVVLSSPFYAGLIALVLSET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R G+++VPRGQ EA  ALG+ +    RL+++PQA+R  +P L++Q++ ++K +
Sbjct: 107 AYMAEIHRGGILSVPRGQYEAGKALGIRYSGIQRLIVIPQAIRIALPTLSNQFVTIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL   +   +++ VG  +  Q     E +L   F Y+ +  +    + RL A + + ++K
Sbjct: 167 SLVSVISLTEILLVGQRLYTQNFLIFETMLAVAFYYVLVVTLFDKVLIRLEAFLDVTQRK 226


>gi|291544793|emb|CBL17902.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus sp. 18P13]
          Length = 233

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 118/231 (51%), Gaps = 16/231 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY---IST 226
           FL +    + T  + T   +  F+ +LG+VL  F   + R  H+K GK   L +   +  
Sbjct: 15  FLKDDRWKYLTDGLSTTLIVTFFAVILGMVLG-FLIAIVRATHDKNGKLGVLNFFAKVYL 73

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V + + Y + F             +    + +   +A    +AA++AEIVR
Sbjct: 74  TVIRGTPVVVQLLILYFIIF------------ATVNIDKTLVAILAFGLNSAAYVAEIVR 121

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++++  GQ EA  +LGL + K    ++LPQA ++I+P L ++ + LLK +S+A  +  
Sbjct: 122 SGIMSIDNGQFEAGASLGLNYSKTMLCIILPQAFKNILPALANECIVLLKETSVAGYIAL 181

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL   G  I +QT +A   ++    IYL + + ++  + +L  ++A  ++
Sbjct: 182 VDLTKGGDIIRSQTYEAFLPLIAVAIIYLVMVMFLSAMVTKLERRLAKSDR 232



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFRNIP 140
              +  G   T  + F  +I   ++G L+   R + +K     ++ +  +VY+ V R  P
Sbjct: 21  WKYLTDGLSTTLIVTFFAVILGMVLGFLIAIVRATHDKNGKLGVLNFFAKVYLTVIRGTP 80

Query: 141 PLVVIFFLYKSVLSV 155
            +V +  LY  + + 
Sbjct: 81  VVVQLLILYFIIFAT 95


>gi|165871931|ref|ZP_02216573.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|190566522|ref|ZP_03019439.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196035250|ref|ZP_03102656.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|218902066|ref|YP_002449900.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|227816276|ref|YP_002816285.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228926026|ref|ZP_04089107.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228944595|ref|ZP_04106965.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229089915|ref|ZP_04221170.1| Amino acid ABC transporter [Bacillus cereus Rock3-42]
 gi|229120487|ref|ZP_04249734.1| Amino acid ABC transporter [Bacillus cereus 95/8201]
 gi|254682947|ref|ZP_05146808.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CNEVA-9066]
 gi|254725735|ref|ZP_05187517.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A1055]
 gi|254734361|ref|ZP_05192074.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Western North America USA6153]
 gi|254739991|ref|ZP_05197683.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Kruger B]
 gi|254753330|ref|ZP_05205366.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Vollum]
 gi|254758428|ref|ZP_05210455.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Australia 94]
 gi|164712362|gb|EDR17897.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|190562074|gb|EDV16042.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992314|gb|EDX56276.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|218537512|gb|ACK89910.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|227007055|gb|ACP16798.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228663072|gb|EEL18665.1| Amino acid ABC transporter [Bacillus cereus 95/8201]
 gi|228693540|gb|EEL47246.1| Amino acid ABC transporter [Bacillus cereus Rock3-42]
 gi|228815055|gb|EEM61306.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228833738|gb|EEM79294.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 209

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 108/216 (50%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P L
Sbjct: 1   MPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +   +  P L              + +  I  S    A+ +EI+R+ ++++P+G
Sbjct: 58  VQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKG 106

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 107 QWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQE 166

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I     + + +      IY  +  ++++    L  +
Sbjct: 167 IAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 202



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 8   VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 67

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 68  PTLNVEVEPYTAAVIGFSLN 87


>gi|110802404|ref|YP_697895.1| amino acid ABC transporter permease [Clostridium perfringens SM101]
 gi|110682905|gb|ABG86275.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens SM101]
          Length = 223

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 110/231 (47%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F        L     T+  +A   +   +LG +L          F  K  + +   Y+
Sbjct: 6   FSFLKEYFPVFLEGAKWTLIISAITVILGALLGTILCFMKRFKFSIFKVKILRVISTAYV 65

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P L+ I + Y           F             S  IA+S  +AA+++EI
Sbjct: 66  E--VIRGTPLLLQIYIVY-----------FGLPSFGIQLEVLPSCIIAISLNSAAYVSEI 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ+EAA +LG+T   A RL++LPQA+++I+P + ++++ ++K SS+A  +
Sbjct: 113 IRAGIDAVDKGQLEAARSLGMTEGMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTI 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G A+L+     +   T +  E +++    Y  ++  +   M+ +  +++  
Sbjct: 173 GVAELMYSSKIVTGATYKGFEPLIVIAMFYFVMTFSLGRVMSYVEKRLSKS 223



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRV 131
           + ++    Y    L G   T  ++   +I   ++GT++   +         K++  I   
Sbjct: 4   LDFSFLKEYFPVFLEGAKWTLIISAITVILGALLGTILCFMKRFKFSIFKVKILRVISTA 63

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           YVEV R  P L+ I+ +Y  + S    
Sbjct: 64  YVEVIRGTPLLLQIYIVYFGLPSFGIQ 90


>gi|331091628|ref|ZP_08340462.1| hypothetical protein HMPREF9477_01105 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330403385|gb|EGG82944.1| hypothetical protein HMPREF9477_01105 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 229

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 103/223 (46%), Gaps = 14/223 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+  +         +G+++++     S        K L  +YI+  +I G
Sbjct: 21  YLVYLDGLKVTILISLFAIAIGVAIGLLIAVIKVSASEKKVLVGLKWLCNVYIT--VIRG 78

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V + + Y L F             +  + E +   I     + A++AEI+R+G+ +
Sbjct: 79  TPVMVQLLIIYNLVF------------TARDTNEIVVGAICFGINSGAYVAEIIRAGIES 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQMEA  +LG  + +  R +++PQA+++I+P L+++++ L+K +S+A  +   DL  
Sbjct: 127 IDKGQMEAGRSLGFNYIQTMRYIIVPQAIKNILPALSNEFIVLIKETSVAGIIAVTDLTK 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               I +     +  + +    YL + + +      L  ++A 
Sbjct: 187 AAQYIGSTDYNILPPLYVAAVCYLIIVLGLTKLQGLLERRLAR 229



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRVYVEVFR 137
                  L G   T  ++   +     IG L+   ++SA+       + W+C VY+ V R
Sbjct: 18  DQRYLVYLDGLKVTILISLFAIAIGVAIGLLIAVIKVSASEKKVLVGLKWLCNVYITVIR 77

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V +  +Y  V +  
Sbjct: 78  GTPVMVQLLIIYNLVFTAR 96


>gi|242280828|ref|YP_002992957.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123722|gb|ACS81418.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 593

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 9/284 (3%)

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
             + + + +    +A + +V   +++      + F +  ++  V       I    G  L
Sbjct: 309 FSLSSAQAARKAFIAKLSKVLGLIWKGTFLACLGFLVVSALYGVSKFNFEVIRENIGTML 368

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIF 230
             R        +        FS ++ ++    +  +       +T K    L  ST  I 
Sbjct: 369 WWRFPEGDPNEILWGLGGLSFSIIMSVIAISVSFFIGLIVGIGRTSKNKLFLIPSTLYIE 428

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +    LI + + ++F  P+L              F S  IAL+ +T A++AEIVRSG+ 
Sbjct: 429 LIRGNPLIMVIFWIYFFIPILTG-------QFLNVFWSATIALTVFTGAYLAEIVRSGIQ 481

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P GQ EAA++ GLT+ +A R V+LPQA++ ++P +  Q++ + K++SLA  +G  +L 
Sbjct: 482 NLPPGQFEAAVSTGLTYWQAMRKVILPQALKQMLPAIVGQFIAIFKDTSLAFVIGVLELT 541

Query: 351 SVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            V   + N+      EI     F+Y     +++L   RL  K++
Sbjct: 542 FVAQGLNNRLMIYPFEIYTTVAFLYFICCYLMSLVARRLERKLS 585



 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 7/258 (2%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF-SFVLGIVLSL 202
            + +L  + ++ + +     V  FG   +   L     +        +     L I +SL
Sbjct: 10  WVQYLCLATVTAILVYYFGWVFDFGYKFDWSVLYKEDPSYGEVLGGMLVTGLNLTISISL 69

Query: 203 FATRLSRHFHEKT-----GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV-LGQFNF 256
            ++ ++             +  P+ Y  T  +       L+   +  +F  P+ L +   
Sbjct: 70  MSSAIALGLGILFGLGRLSQFKPVYYFCTCYVEFFRNTPLLVQLFFWYFALPMGLPEAAR 129

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                 + E +S  + L  YT++F+AE++R+G+ ++P+G +EAA + GLT  +    ++L
Sbjct: 130 NFLFDQNFEMLSATVGLGIYTSSFMAEVIRAGIQSIPKGLLEAAYSSGLTPFQTLTKIIL 189

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A R+IIPPL S++LN +KNSSLA+ VG  ++      I   T +  E       IYLS
Sbjct: 190 PLAFRAIIPPLGSEFLNNMKNSSLAMVVGVPEICWASQQIEGMTFKGFEATTAATVIYLS 249

Query: 377 LSIMIALFMNRLNAKIAL 394
           LS+ IA  +  +N K+ +
Sbjct: 250 LSLTIAGILTLVNWKLQI 267



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 6/134 (4%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGA 116
            G++ +  G++ D  ++ Y  D SY   +    + G   T  ++      A  +G L G 
Sbjct: 27  FGWVFD-FGYKFDWSVL-YKEDPSYGEVLGGMLVTGLNLTISISLMSSAIALGLGILFGL 84

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GRLS  K V + C  YVE FRN P LV +FF Y ++   LP    + +      + +  +
Sbjct: 85  GRLSQFKPVYYFCTCYVEFFRNTPLLVQLFFWYFALPMGLPEAARNFLFDQNFEMLSATV 144

Query: 177 SFPTLTMDTNAKIF 190
                T    A++ 
Sbjct: 145 GLGIYTSSFMAEVI 158



 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 34/66 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   +  ++   +  +  IG +VG GR S NKL      +Y+E+ R  P ++VIF+
Sbjct: 382 WGLGGLSFSIIMSVIAISVSFFIGLIVGIGRTSKNKLFLIPSTLYIELIRGNPLIMVIFW 441

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 442 IYFFIP 447


>gi|65318269|ref|ZP_00391228.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
          Length = 232

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 18  IMQTSFMPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--II 74

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  I  S    A+ +EI+R+ +
Sbjct: 75  RGTPLLVQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASI 123

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 124 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 183

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 184 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 225



 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 31  VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 90

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 91  PTLNVEVEPYTAAVIGFSLN 110


>gi|167745542|ref|ZP_02417669.1| hypothetical protein ANACAC_00233 [Anaerostipes caccae DSM 14662]
 gi|167655263|gb|EDR99392.1| hypothetical protein ANACAC_00233 [Anaerostipes caccae DSM 14662]
          Length = 227

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 111/214 (51%), Gaps = 16/214 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + ++GI+  +F+         K    +  +Y+   +I G P +V + + Y 
Sbjct: 23  QLALASLICASIIGIIFGMFS-----VSKNKILNIICKIYVD--IIRGTPLVVQVFIMYY 75

Query: 244 L---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                F +P+   ++  GG      F++  +ALS    A++AEIVR G+ +V +GQMEAA
Sbjct: 76  GVAGAFLQPMDLNWDDFGG-----PFVAAVVALSLNAGAYMAEIVRGGIESVDKGQMEAA 130

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI-INQ 359
            +LGL + KA   V+LPQA+R+++P + +Q++  +K++SL  A+G  +L      I  N+
Sbjct: 131 RSLGLPYGKAMSKVILPQAIRTMLPSIINQFIISIKDTSLVYAIGIRELTMNSQIITANE 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               + I ++    YL +  +++   N +  K++
Sbjct: 191 PTSVMSIYVMAAIYYLVICTILSKVANIVERKLS 224



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 41/86 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y  +       T  LA + +I A+IIG + G   +S NK++  IC++YV++ R  P +
Sbjct: 8   QQYFPSFSTALGLTLQLALASLICASIIGIIFGMFSVSKNKILNIICKIYVDIIRGTPLV 67

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFG 168
           V +F +Y  V      P       FG
Sbjct: 68  VQVFIMYYGVAGAFLQPMDLNWDDFG 93


>gi|91786938|ref|YP_547890.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696163|gb|ABE42992.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 222

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +         G            +I   S +LG V+ L       +   +    L   Y+
Sbjct: 1   MELDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P LV + + +           F       + P F+   I L  Y+ A+++E+
Sbjct: 61  --AIIRGTPLLVQLFILF-----------FGLPQFGILLPAFVCGVIGLGIYSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  + ++ RGQMEAA ++G++   A R V+LPQA+  +IPPL ++++ L+KNS+L   +
Sbjct: 108 VRGAIQSIDRGQMEAARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLL 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              D++  G  II+ + +++E+ L    +Y  L+    L + R+  ++ 
Sbjct: 168 TIHDVMHEGQKIISVSYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLR 216



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-ANKLVAWICRVYVEV 135
           + ++   S    +L G + T  +  + ++   ++G LVG GRL+   ++V  +C  YV +
Sbjct: 3   LDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAI 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157
            R  P LV +F L+  +     
Sbjct: 63  IRGTPLLVQLFILFFGLPQFGI 84


>gi|295099754|emb|CBK88843.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Eubacterium cylindroides
           T2-87]
          Length = 238

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 110/222 (49%), Gaps = 4/222 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +            + + + +LG +L L A  L +  H K   A+   Y    +I G P 
Sbjct: 19  WIPTFIDGTIVTIVLALMTVILGCILGLLAI-LMKRSHIKVLNAISTAYTQ--VIRGTPM 75

Query: 235 LVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+ + +  Y        +     +G    S EF++  +AL+  + A+I E++R GL ++ 
Sbjct: 76  LLQLYIWLYGFPMIGISIPSIPMLGSVYGSREFLTAVVALAINSGAYICELLRGGLDSID 135

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEA  +LG ++ +  R +++PQA+R ++P L ++++ ++K SS+   VG  D++   
Sbjct: 136 KGQMEAGRSLGFSNLETMRYIIVPQAIRVVLPGLCNEFIMMIKESSIVSVVGVFDIMYTS 195

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   T    E ++I   IY +L+ ++   M+ +  K+ + 
Sbjct: 196 NIVKASTYSVFEPLIIIAIIYFALTSVLTTIMSLIERKLKVY 237



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T    +    + G + T  LA   +I   I+G L    + S  K++  I   Y +V 
Sbjct: 11  IDFTKMIKWIPTFIDGTIVTIVLALMTVILGCILGLLAILMKRSHIKVLNAISTAYTQVI 70

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           R  P L+ ++        +        +L
Sbjct: 71  RGTPMLLQLYIWLYGFPMIGISIPSIPML 99


>gi|114327541|ref|YP_744698.1| Gln/Arg/Lys/His-binding protein and permease [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315715|gb|ABI61775.1| gln/Arg/Lys/His-binding protein and permease protein [Granulibacter
           bethesdensis CGDNIH1]
          Length = 503

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 16/264 (6%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E F      +    +Y         P  +  + F  ++    L        T  ++ + +
Sbjct: 251 ETFTGDHTSITQPAVYYDEFVKAHAPATAWRIKFKRYIGFIPLIAHAAV--TTLEVSLLA 308

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            VL + + L    +SR +     + L ++YI   ++ G P L+ +   +   +  P L  
Sbjct: 309 MVLAVAMGLLL-AVSRLYGPAPLRMLSVMYIE--IMRGTPLLIQVLFVF---YGLPNL-- 360

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                G  + P F +  +AL    AA+ AE  R+GL AVP GQ EAAIAL +T  +A R 
Sbjct: 361 -----GIRLDP-FFAGVLALGLNYAAYEAENYRAGLGAVPHGQYEAAIALNMTSFQALRH 414

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V++PQA R +IP +T+ +++ LK+SSL   +  ++L      +           L+    
Sbjct: 415 VVIPQAFRLVIPVMTNDFISALKDSSLLSVITLSELSQTYVRLSTTYYDYFGTGLMIGAA 474

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL + +           ++    +
Sbjct: 475 YLLIGLPFVRLARWTEERLHTGRR 498



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           V T  ++   M+ A  +G L+   RL     +  +  +Y+E+ R  P L+ + F++  + 
Sbjct: 299 VTTLEVSLLAMVLAVAMGLLLAVSRLYGPAPLRMLSVMYIEIMRGTPLLIQVLFVFYGLP 358

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           ++    D        + LN              A
Sbjct: 359 NLGIRLDPFFAGVLALGLNYAAYEAENYRAGLGA 392


>gi|29833088|ref|NP_827722.1| ABC transporter permease [Streptomyces avermitilis MA-4680]
 gi|29610210|dbj|BAC74257.1| putative polar amino acid ABC transporter ATP-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 281

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 10/238 (4%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
               +    F +   L    LT+   A + V  F LG +L+       R       +++ 
Sbjct: 52  FQWDVVADYFTSASVLRGLWLTLWLTAVVMVLGFALGTLLA-----AGRLSANPVLRSVS 106

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             Y+  F    +P LV + L + +    P   Q   +    +        + L+ + AA+
Sbjct: 107 WGYVWLF--RSMPILVQLLLWFNIGALYP---QILGVKTVNLLGPVTVAIVGLTLHEAAY 161

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE+VR G+++V RGQ+EAA ALGL+  +    ++LPQAMRSI+PP  +  +  LK +S+
Sbjct: 162 AAEVVRGGILSVDRGQIEAAQALGLSRWRRWWRIVLPQAMRSIVPPAGNMLIGTLKGTSI 221

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +   DL+     + ++T Q I ++++    Y+ ++ ++++    +    A   ++
Sbjct: 222 VSVIAVQDLLYSVQLVYHRTYQVIPLLMVATVWYVVVTSVLSVGQYYVEKYYARGSER 279



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 37/79 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    M+    +GTL+ AGRLSAN ++  +   YV +FR++P LV +   +
Sbjct: 67  LRGLWLTLWLTAVVMVLGFALGTLLAAGRLSANPVLRSVSWGYVWLFRSMPILVQLLLWF 126

Query: 150 KSVLSVLPIPDHSIVLPFG 168
                   I     V   G
Sbjct: 127 NIGALYPQILGVKTVNLLG 145


>gi|307265618|ref|ZP_07547172.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389622|ref|ZP_08211188.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter ethanolicus JW 200]
 gi|306919416|gb|EFN49636.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994337|gb|EGD52763.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 220

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+   +  +G++L L    L +    K    +   Y+   +I G P LV + L Y  
Sbjct: 21  MTLKLTFLAVTIGVILGLIV-ALIKMSSIKPISFIGASYVE--IIRGTPLLVQLLLIYN- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L QF         P F +   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG
Sbjct: 77  -----GLMQFG-----IDIPAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +TH  A R V++PQA+++I+P L ++++ +LK S++   +GFADL      I + T +  
Sbjct: 127 MTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSITYKYF 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +I   IY  ++ + +  +     ++   + +
Sbjct: 187 EPYIIIAAIYFVMTFIFSRLLGIFERRLRAGDTR 220



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 36/78 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+   + G + T  L F  +    I+G +V   ++S+ K +++I   YVE+ R  P LV 
Sbjct: 11  YSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVEIIRGTPLLVQ 70

Query: 145 IFFLYKSVLSVLPIPDHS 162
           +  +Y  ++         
Sbjct: 71  LLLIYNGLMQFGIDIPAF 88


>gi|295115402|emb|CBL36249.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SM4/1]
          Length = 234

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 100/218 (45%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + +F LG +L++    + R         +  LY+  ++I G P 
Sbjct: 13  FWPILKAGITYTIPLTLIAFALGTLLAVLV-AIIRISRVPILDRICELYV--WIIRGTPL 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +           F       V     S  +  +    A+ +EI R+ ++++P+
Sbjct: 70  LVQLFLVF-----------FGLPKVGIVIDPMPSGILVFTLSIGAYSSEIFRAAILSIPK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++LG+++ +    V+LPQA++  +PPL + ++ L+K++SLA  +   ++     
Sbjct: 119 GQWEAAMSLGMSYPQQLIRVILPQAVKISVPPLFNSFIALVKDTSLAANITIPEMFLTTQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I  +  + + + +   FIYL    ++     ++  ++
Sbjct: 179 RITARNYEPLLMYIEVGFIYLIFCTVLNYLQKKVEDRL 216



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G   T  L        T++  LV   R+S   ++  IC +YV + R  P 
Sbjct: 10  TESFWPILKAGITYTIPLTLIAFALGTLLAVLVAIIRISRVPILDRICELYVWIIRGTPL 69

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV 164
           LV +F ++  +  V  + D    
Sbjct: 70  LVQLFLVFFGLPKVGIVIDPMPS 92


>gi|271499665|ref|YP_003332690.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343220|gb|ACZ75985.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 281

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  I + S +  I+L++ A    R             Y+S F   G P LV + + Y  
Sbjct: 75  LSVVITLISMLFCILLAVIAAA-GRLSSSAIAFGCATFYVSLF--RGTPLLVQVLIIY-- 129

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                            V   F S  IALS    A++AE +RSG+++VPRGQ EAA+ALG
Sbjct: 130 ---------LALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSGVLSVPRGQKEAAMALG 180

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+    T  V+ PQA+R IIPP  SQ+++++K+SSL   +G  +L  +  +    T   +
Sbjct: 181 LSRWVITTHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRSTYHYM 240

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E++     IY  LSI + L   RL  +    
Sbjct: 241 EMLTTAAVIYWLLSIGLELLQGRLERRFGRG 271



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 13/165 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G V +  +    M+   ++  +  AGRLS++ +       YV +FR  P LV +  +
Sbjct: 69  FIQGAVLSVVITLISMLFCILLAVIAAAGRLSSSAIAFGCATFYVSLFRGTPLLVQVLII 128

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG---IVLSLFAT 205
           Y ++  V  +          + LN       T+         V S   G     ++L  +
Sbjct: 129 YLALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSG------VLSVPRGQKEAAMALGLS 182

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPT----LVLIALKYQLHF 246
           R     H    +AL ++       F        LV +   ++L+F
Sbjct: 183 RWVITTHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNF 227


>gi|229042255|ref|ZP_04190007.1| Amino acid ABC transproter, permease [Bacillus cereus AH676]
 gi|229108024|ref|ZP_04237650.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-15]
 gi|229125851|ref|ZP_04254876.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-Cer4]
 gi|229143144|ref|ZP_04271576.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST24]
 gi|228640225|gb|EEK96623.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST24]
 gi|228657509|gb|EEL13322.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-Cer4]
 gi|228675424|gb|EEL30642.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-15]
 gi|228727046|gb|EEL78251.1| Amino acid ABC transproter, permease [Bacillus cereus AH676]
          Length = 251

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I       L      +   +    +      L    +T+       V   ++G++ + F 
Sbjct: 3   ILCGAFHSLLKSIQYEVKRMFEIFISSYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF- 61

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  + K   ++  +YI   +I G P +V IA+ Y              I    V  
Sbjct: 62  ----RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFT 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +
Sbjct: 104 PFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F
Sbjct: 164 PPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGAYYLILVLLFTYF 223

Query: 385 MNRLNAKIALKE 396
           +N L  ++  KE
Sbjct: 224 VNLLEKRLQRKE 235



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 33  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 93  YFGITSVVVFTPFWAGAIALAIHNGAYI 120


>gi|227496261|ref|ZP_03926557.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Actinomyces urogenitalis DSM 15434]
 gi|226834186|gb|EEH66569.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Actinomyces urogenitalis DSM 15434]
          Length = 285

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 7/237 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             + +             +     + V + ++GIVL+  AT ++R       + +   Y+
Sbjct: 12  FRWDLVWFYFRYDDVVRAVGWTLALTVAAMLIGIVLA-AATAVARQSENPVLRYVAYAYV 70

Query: 225 STFLIFGLPT-LVLIALKYQLH----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             F    + T LV   L   L+       P   +F       V    ++  + L     A
Sbjct: 71  FFFRGTPIYTQLVFWGLLPALYNKLSLGVPFGPEFFVFSTKEVFSGAVAAILGLGLNEGA 130

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI+RSGL +V  GQ EAA ALG+++    R ++LPQAMR I+PP  ++ +++LK +S
Sbjct: 131 YLSEIMRSGLNSVDAGQREAASALGMSNGTILRRIILPQAMRVIVPPTGNETISMLKTTS 190

Query: 340 LAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L +AV F  +L  V   + N+  Q I ++++    YL ++ ++ +  + +       
Sbjct: 191 LVLAVPFTKELTFVANNVGNRLFQPIPLLIVAALWYLIITSILMVGQHYIERYFGRG 247



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 21/57 (36%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
              T  L  + M+   ++       R S N ++ ++   YV  FR  P    + F  
Sbjct: 30  VGWTLALTVAAMLIGIVLAAATAVARQSENPVLRYVAYAYVFFFRGTPIYTQLVFWG 86


>gi|167758321|ref|ZP_02430448.1| hypothetical protein CLOSCI_00660 [Clostridium scindens ATCC 35704]
 gi|167664218|gb|EDS08348.1| hypothetical protein CLOSCI_00660 [Clostridium scindens ATCC 35704]
          Length = 226

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 112/224 (50%), Gaps = 11/224 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                     +T++      +F+ ++G ++ LF          K  + +  +YI   ++ 
Sbjct: 10  YWPSFCKALMITLEMTVFSLIFATIIGTIVGLFN-----VSKIKPLQFIANIYID--IVR 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + + Y   +      QF +      +  F++  + LS    A++AEI+R G+ 
Sbjct: 63  GTPLLVQVFIMY---YGLTQFLQFQWPAIGGFTSAFVAGVVTLSFNAGAYMAEIIRGGIE 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQMEAA +LGL +RKA   ++LPQA R+++P + +Q++  LK++SL   +G  +L 
Sbjct: 120 AVDKGQMEAARSLGLPYRKAMWKIILPQAFRTMLPSIINQFIISLKDTSLISVIGPRELT 179

Query: 351 SVGGTI-INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  I  N + + + I ++    YL +  +++     +  K++
Sbjct: 180 QNGKIIAANSSTRVMAIWIVVALFYLVVCTILSRVAKLVERKVS 223



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 37/78 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y  +     + T  +    +I ATIIGT+VG   +S  K + +I  +Y+++ R  P L
Sbjct: 8   QEYWPSFCKALMITLEMTVFSLIFATIIGTIVGLFNVSKIKPLQFIANIYIDIVRGTPLL 67

Query: 143 VVIFFLYKSVLSVLPIPD 160
           V +F +Y  +   L    
Sbjct: 68  VQVFIMYYGLTQFLQFQW 85


>gi|150398046|ref|YP_001328513.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150029561|gb|ABR61678.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 323

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 18/302 (5%)

Query: 100 AFSGMIPATI---IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           A+ GM+  T    +      GRL +  ++A I  +  +  R +P    I  ++  +  +L
Sbjct: 37  AWIGMVLPTSSEWLAANPALGRLVSAVMIAVIAALNWKALRQLPRHWQITGVWLELFVLL 96

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
            I  +S  L F  F+  +     +  + T   I V S  +  V++L    +++       
Sbjct: 97  MIFFYSFNLSF-AFIAKKISFLISQGVVTTLYISVISIAVATVIALLG-AIAKLSRNGVI 154

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             L   Y S F       L L+   Y ++   P +          V     +  +ALS  
Sbjct: 155 YGLATFYTSLFR-----GLPLLMQIYIIYLGLPQV--------GYVISAVPAGILALSLC 201

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EI R+G+ ++PRGQ E A ALGL+  +   LV+LPQAMR IIPP  +Q++ +LK
Sbjct: 202 YGAYMTEIFRAGIESIPRGQSEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLK 261

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SSL   VG  +L+ +  T      + IE+++    IY  LSI +    +R+ A+     
Sbjct: 262 DSSLISVVGVWELMYLARTQGQTEFRHIEMLITASMIYWILSIGLEFIQSRIEARFGRFN 321

Query: 397 KK 398
            +
Sbjct: 322 VR 323



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 29/134 (21%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R   I+   +   +L +IF +  N            L   F++++  F I Q       
Sbjct: 80  PRHWQITGVWLELFVLLMIFFYSFN------------LSFAFIAKKISFLISQ------- 120

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                     G V T +++   +  AT+I  L    +LS N ++  +   Y  +FR +P 
Sbjct: 121 ----------GVVTTLYISVISIAVATVIALLGAIAKLSRNGVIYGLATFYTSLFRGLPL 170

Query: 142 LVVIFFLYKSVLSV 155
           L+ I+ +Y  +  V
Sbjct: 171 LMQIYIIYLGLPQV 184


>gi|289803650|ref|ZP_06534279.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 189

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 18/205 (8%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            +LG VL+L      R       + L   YIS F   G P +  + + Y        L Q
Sbjct: 1   MLLGFVLALM-----RMSPLWPVRWLARFYISIF--RGTPLIAQLFMIYY------GLPQ 47

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F             +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  R 
Sbjct: 48  FG-----IELDPIPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRR 102

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
            +LPQA R  +PPL++ +++L+K++SLA  +   +L      I ++T +   + L    I
Sbjct: 103 AILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLI 162

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           Y  ++ +++   N    ++  +E++
Sbjct: 163 YWVMATVLSALQNYFENQLNRQERE 187



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 34/81 (41%)

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            ++G ++   R+S    V W+ R Y+ +FR  P +  +F +Y  +       D       
Sbjct: 1   MLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMI 60

Query: 168 GMFLNNRGLSFPTLTMDTNAK 188
           G+ LN    +  TL    +A 
Sbjct: 61  GLSLNTAAYTSETLRAAISAI 81


>gi|317472894|ref|ZP_07932200.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|316899614|gb|EFV21622.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 227

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 117/236 (49%), Gaps = 16/236 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +          L+   LT+       + + ++GI+  +F+         K    +  
Sbjct: 1   MNFIELFQQYFPSFLTALGLTLQLALASLICASIIGIIFGMFS-----VSKNKILNIICK 55

Query: 222 LYISTFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +Y+   +I G P +V + + Y      F +P+   ++  GG      F++  +ALS    
Sbjct: 56  IYVD--IIRGTPLVVQVFIMYYGVAGAFLQPMDLNWDDFGG-----PFVAAVVALSLNAG 108

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEIVR G+ +V +GQMEAA +LGL + KA   V+LPQA+R+++P + +Q++  +K++
Sbjct: 109 AYMAEIVRGGIESVDKGQMEAARSLGLPYGKAMSKVILPQAIRTMLPSIINQFIISIKDT 168

Query: 339 SLAVAVGFADLVSVGGTI-INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           SL  A+G  +L      I  N+    + I ++    YL +  +++   N +  K++
Sbjct: 169 SLVYAIGIRELTMNSQIITANEPTSVMSIYVMAAIYYLVICTILSKVANIVERKLS 224



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 42/86 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y  + L     T  LA + +I A+IIG + G   +S NK++  IC++YV++ R  P +
Sbjct: 8   QQYFPSFLTALGLTLQLALASLICASIIGIIFGMFSVSKNKILNIICKIYVDIIRGTPLV 67

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFG 168
           V +F +Y  V      P       FG
Sbjct: 68  VQVFIMYYGVAGAFLQPMDLNWDDFG 93


>gi|269963235|ref|ZP_06177569.1| polar amino acid ABC transporter, permease protein [Vibrio harveyi
           1DA3]
 gi|269832040|gb|EEZ86165.1| polar amino acid ABC transporter, permease protein [Vibrio harveyi
           1DA3]
          Length = 265

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 19/277 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             ++  I ++ + +   +  L               +PD+      G +     +    +
Sbjct: 7   KPVLQAILQIAILLIAIVWVLDSGAQAMGYQWQWERVPDYIAFYEDGEWWPAELVDGLIV 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A    F+ V+G V +L      R  + K G A+   Y+   +I   P LV I L 
Sbjct: 67  TLKISAISLFFTLVIGFVTALL-----RLSNSKVGNAIGTTYVE--MIRNTPLLVQIYLL 119

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +ALS +  A+ AEI R+GL ++P+GQ EAA 
Sbjct: 120 YFVF------------GPVIGLDRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEAAK 167

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            LGL+   A + V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T 
Sbjct: 168 TLGLSPFFAYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEARNIVSETA 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              EI      IYL+L++ ++     L  K+    +K
Sbjct: 228 MPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWRK 264



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R+    +Q IL + + +I +  V      ++    ++G  +  ER         + +  D
Sbjct: 4   RILKPVLQAILQIAILLIAIVWV------LDSGAQAMGYQWQWER-----VPDYIAFYED 52

Query: 83  SSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  A LV G + T  ++   +    +IG +    RLS +K+   I   YVE+ RN P 
Sbjct: 53  GEWWPAELVDGLIVTLKISAISLFFTLVIGFVTALLRLSNSKVGNAIGTTYVEMIRNTPL 112

Query: 142 LVVIFFLYKSV 152
           LV I+ LY   
Sbjct: 113 LVQIYLLYFVF 123


>gi|326315799|ref|YP_004233471.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323372635|gb|ADX44904.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 217

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 12/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+F  + VL + L L    L+R         L   YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLKLFAITLVLAVPLGLAL-ALARVSRWGLLSGLVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+ ++ RGQ EAA  LG
Sbjct: 74  LPFVPVI--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEAAKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  R ++LPQ +R I+PP++++ + L+K++SL   +   DL+     I+ +     
Sbjct: 126 MTYGQTMRRIVLPQMVRRILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              L+    YL +++++     RL  + A  +
Sbjct: 185 TPFLVAAAFYLVMTLVLTWGFQRLERRYARHD 216



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    ++ A  +G  +   R+S   L++ +   Y+ + R  P ++ + F+
Sbjct: 11  LAQGATVTLKLFAITLVLAVPLGLALALARVSRWGLLSGLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|228937645|ref|ZP_04100282.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228977104|ref|ZP_04137505.1| Amino acid ABC transproter, permease [Bacillus thuringiensis Bt407]
 gi|228782552|gb|EEM30729.1| Amino acid ABC transproter, permease [Bacillus thuringiensis Bt407]
 gi|228822019|gb|EEM68010.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 251

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I       L      +   +    +      L    +T+       V   ++G++ + F 
Sbjct: 3   ILCGAFHSLLKSIQYEVKRMFEIFISSYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF- 61

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  + K   ++  +YI   +I G P +V IA+ Y              I    V  
Sbjct: 62  ----RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFT 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +
Sbjct: 104 PFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F
Sbjct: 164 PPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGAYYLVLVLLFTYF 223

Query: 385 MNRLNAKIALKE 396
           +N L  ++  KE
Sbjct: 224 VNLLEKRLQRKE 235



 Score = 43.0 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 33  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 93  YFGITSVVVFTPFWAGAIALAIHNGAYI 120


>gi|110800463|ref|YP_695035.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           perfringens ATCC 13124]
 gi|110675110|gb|ABG84097.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens ATCC 13124]
          Length = 223

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F        L     T+  +A   +   +LG +L          F  K  + +   Y+
Sbjct: 6   FSFLKEYFPVFLEGAKWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTAYV 65

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P L+ I + Y           F             S  IA+S  +AA+++EI
Sbjct: 66  E--VIRGTPLLLQIYIVY-----------FGLPSFGIQLEVLPSCIIAISLNSAAYVSEI 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ+EAA +LG+    A RL++LPQA+++I+P + ++++ ++K SS+A  +
Sbjct: 113 IRAGIDAVDKGQLEAARSLGMAEGMAMRLIILPQAIKNILPAIGNEFVAIIKESSMASTI 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G A+L+     +   T +  E +++    Y  ++  +   M+ +  +++  
Sbjct: 173 GVAELMYSSKIVTGATYKGFEPLIVIAMFYFVMTFSLGRVMSYVEKRLSKS 223



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 5/87 (5%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRV 131
           + ++    Y    L G   T  ++   +I   ++GT++   + S       K++  I   
Sbjct: 4   LDFSFLKEYFPVFLEGAKWTLIISAITVILGALLGTILCFMKRSKFSIFKVKILRVISTA 63

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           YVEV R  P L+ I+ +Y  + S    
Sbjct: 64  YVEVIRGTPLLLQIYIVYFGLPSFGIQ 90


>gi|222094600|ref|YP_002528660.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1]
 gi|221238658|gb|ACM11368.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1]
          Length = 235

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 21  IMQTSFMPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--II 77

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  +  S    A+ +EI+R+ +
Sbjct: 78  RGTPLLVQLFIIF---YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASI 126

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 127 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 186

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 187 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 228



 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 34  VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 93

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 94  PTLNIEVEPYTAAVVGFSLN 113


>gi|15673779|ref|NP_267954.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|281492390|ref|YP_003354370.1| polar amino acid ABC transporter permease [Lactococcus lactis
           subsp. lactis KF147]
 gi|12724822|gb|AAK05895.1|AE006409_5 glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|281376054|gb|ADA65545.1| Polar amino acid ABC transporter, permease protein [Lactococcus
           lactis subsp. lactis KF147]
 gi|326407285|gb|ADZ64356.1| polar amino acid ABC transporter, permease protein [Lactococcus
           lactis subsp. lactis CV56]
          Length = 228

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +    M     I  F  ++G +L +  T L++       + L  +YI  F   G 
Sbjct: 7   PKYLPYFNDGMIVTILISAFVVLIGTLLGIV-TALAKISKIAPLRWLANIYIEIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I L + L      L  F            +   I +S  + A++AEIVR+G+ AV
Sbjct: 64  PMLVQIMLGFGL-MGSLSLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA +LG+  R+A   V+LPQA+R+I+P + ++++ ++K+SSL   +G  ++ + 
Sbjct: 123 PLGQKEAAYSLGIRPRQAMATVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVFNG 182

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+ N T Q I  +L     Y  ++ +++  +     K+     K
Sbjct: 183 AQTVANLTYQTISPMLFVALYYFVVTFVVSRLLVLFEKKLGKGYAK 228



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 47/123 (38%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y      G + T  ++   ++  T++G +    ++S    + W+  +Y+E+FR 
Sbjct: 3   FDFLPKYLPYFNDGMIVTILISAFVVLIGTLLGIVTALAKISKIAPLRWLANIYIEIFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P LV I   +  + S+        +L   +     G+   +L         V + +  +
Sbjct: 63  TPMLVQIMLGFGLMGSLSLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAV 122

Query: 199 VLS 201
            L 
Sbjct: 123 PLG 125


>gi|167771386|ref|ZP_02443439.1| hypothetical protein ANACOL_02752 [Anaerotruncus colihominis DSM
           17241]
 gi|167666026|gb|EDS10156.1| hypothetical protein ANACOL_02752 [Anaerotruncus colihominis DSM
           17241]
          Length = 221

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 110/229 (48%), Gaps = 19/229 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      LS    T+       V   ++G VL+L      R    +  + +  LYI+  +
Sbjct: 11  LDRWKLILSGLGTTICIALGAIVIGTLIGAVLALM-----RISRSRLLRGISTLYIT--V 63

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G+P +  + + Y + F              T  P+ +   I+    + A+ AEI RSG
Sbjct: 64  IRGIPMVTQLMIFYFIFF------------APTNVPKLVVAIISFGVNSGAYCAEIFRSG 111

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  VP GQ+EA  +LGL+  +  +L++LPQA ++++P  T++++ L+K +++A  +   D
Sbjct: 112 IQGVPVGQVEAGRSLGLSGAQTMKLIILPQAFKAVLPTYTNEFVVLIKETAVASYIALVD 171

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L      I N T  A   +L    IYL +++ ++    RL  ++A  ++
Sbjct: 172 LTKATDQIRNATFNAWVPLLTAAVIYLCMTLGLSALFARLERRMARSDR 220



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 35/75 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL G   T  +A   ++  T+IG ++   R+S ++L+  I  +Y+ V R IP +  +
Sbjct: 14  WKLILSGLGTTICIALGAIVIGTLIGAVLALMRISRSRLLRGISTLYITVIRGIPMVTQL 73

Query: 146 FFLYKSVLSVLPIPD 160
              Y    +   +P 
Sbjct: 74  MIFYFIFFAPTNVPK 88


>gi|327441628|dbj|BAK17993.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 221

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 15/213 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V S ++GIV+ LF   L +    K  + +  +Y+  FL+ G P +V I + Y  
Sbjct: 24  LTLELTVVSILIGIVIGLF-FALMKISKIKVLELISDIYV--FLVRGTPLIVQIFILY-- 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       + G  + P+F +  +AL+ +  A+I+EI+R  +  V +GQMEA  +LG
Sbjct: 79  ----------FGLSGLFLLPDFWAASLALALHNGAYISEILRGTIQGVDKGQMEAGRSLG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T     R ++LPQA R  +PPL +Q++  LK+SSLA  +   +L +V  T+ +     +
Sbjct: 129 MTKVLTLRRIILPQAFRRALPPLGNQFIIGLKDSSLAAFISMNELFNVATTLGSNNFDEM 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +LI    YL L  ++ L +NR   ++A+ ++
Sbjct: 189 TYLLIVAIYYLVLVALLTLIVNRFEKRLAISDR 221



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 35/90 (38%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
              L   + T  L    ++   +IG      ++S  K++  I  +YV + R  P +V IF
Sbjct: 16  DVFLKAMLLTLELTVVSILIGIVIGLFFALMKISKIKVLELISDIYVFLVRGTPLIVQIF 75

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            LY  +  +  +PD           N   +
Sbjct: 76  ILYFGLSGLFLLPDFWAASLALALHNGAYI 105


>gi|229016185|ref|ZP_04173137.1| Amino acid ABC transporter [Bacillus cereus AH1273]
 gi|229022421|ref|ZP_04178959.1| Amino acid ABC transporter [Bacillus cereus AH1272]
 gi|228738902|gb|EEL89360.1| Amino acid ABC transporter [Bacillus cereus AH1272]
 gi|228745139|gb|EEL95189.1| Amino acid ABC transporter [Bacillus cereus AH1273]
          Length = 225

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 25  FTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 80

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 81  --YGLPTLN--------IEVEPYTAAIIGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 131 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY  +  ++++    L  +
Sbjct: 191 LIVYFEAGLIYWVICFLLSIVQQILEKR 218



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 41/91 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            +S+A  +      T  L     I   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 13  QTSFAPMLKEAVFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 72

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 73  LVQLFIIFYGLPTLNIEVEPYTAAIIGFSLN 103


>gi|164686605|ref|ZP_02210633.1| hypothetical protein CLOBAR_00197 [Clostridium bartlettii DSM
           16795]
 gi|164604334|gb|EDQ97799.1| hypothetical protein CLOBAR_00197 [Clostridium bartlettii DSM
           16795]
          Length = 252

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 106/239 (44%), Gaps = 17/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----RLSRHFHE 213
                ++          L+   +T+  +    V   ++G+++ +  T     R ++    
Sbjct: 1   MSSEWIVKIASQNWKGFLNGAEMTLYISLIGTVIGSIIGMLIGVIRTIPKGERGAKKVIL 60

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
               A+   Y+  F   G P +V   + Y            +   G  +   F +++I +
Sbjct: 61  TIINAILNAYVEFF--RGTPMIVQAMVIYYGS---------DLAFGIDMDRTFAAIFI-V 108

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  T A++AEIVR G+I++ +GQ EAA A+G+ H +    V+LPQ +R+I+P   ++++ 
Sbjct: 109 SINTGAYMAEIVRGGIISIDKGQFEAAQAIGMNHIQTMINVVLPQVIRNILPATGNEFVI 168

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K++S+   +G  +L     +I     +  E   I   +Y  ++  +   +  +  K+
Sbjct: 169 NIKDTSVLNVIGVTELYFTTKSIAGNNFRYFESFFITCIVYFIMTFTVTRILRFIEKKL 227



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRV 131
            S      L G   T +++  G +  +IIG L+G  R               ++  I   
Sbjct: 10  ASQNWKGFLNGAEMTLYISLIGTVIGSIIGMLIGVIRTIPKGERGAKKVILTIINAILNA 69

Query: 132 YVEVFRNIPPLVVIFFLYKSV 152
           YVE FR  P +V    +Y   
Sbjct: 70  YVEFFRGTPMIVQAMVIYYGS 90


>gi|291617813|ref|YP_003520555.1| YecS [Pantoea ananatis LMG 20103]
 gi|291152843|gb|ADD77427.1| YecS [Pantoea ananatis LMG 20103]
 gi|327394230|dbj|BAK11652.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Pantoea ananatis AJ13355]
          Length = 222

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   +      L     T+  +     F  +LG +L+L   RLSR +         L
Sbjct: 2   QESLQLVLDSAPFLLKGALFTLQLSIGGMFFGLILGFLLALM--RLSRFWPVNW-----L 54

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             I   +  G P +  + + Y        L QF             S  I LS   AA+ 
Sbjct: 55  ARIYVSIFRGTPLIAQLFMIYY------GLPQFG-----IELDPIPSAMIGLSLNMAAYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  + A+ RGQ EAA ++G+T  +  R V+LPQA R+ +PPL + +++L+K++SLA
Sbjct: 104 SESLRGAIAAIERGQWEAAASIGMTPWQTLRRVVLPQAARTALPPLGNSFISLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 164 ATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNRLEAHVNRQDQE 220



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    I+G L+   RLS    V W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGALFTLQLSIGGMFFGLILGFLLALMRLSRFWPVNWLARIYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +       D       G+ LN 
Sbjct: 75  YYGLPQFGIELDPIPSAMIGLSLNM 99


>gi|312958351|ref|ZP_07772872.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311287415|gb|EFQ65975.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 221

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K  +    +Y+S F   G P LV + L Y                       
Sbjct: 41  ALMRLSRFKLLRLPARVYVSFF--RGTPLLVQLFLIYY-----------GLPQVGIELDP 87

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  +  R  +LPQAMR+ +P
Sbjct: 88  IPAAMIGFSLNMAAYACEILRAAIASIERGQWEAAASIGMTRAQTLRRAILPQAMRTALP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      +  +T +   + L    IY  L+ ++A F 
Sbjct: 148 PLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFEIFTMYLSAALIYWVLASILAYFQ 207

Query: 386 NRLNAKIALKE 396
           NRL  ++   +
Sbjct: 208 NRLEDRVNRHD 218



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 9/107 (8%)

Query: 67  RAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
            A F++     P+         +L G   T  L+  GM    ++G  +   RLS  KL+ 
Sbjct: 2   EASFQLALDSAPF---------LLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLLR 52

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
              RVYV  FR  P LV +F +Y  +  V    D       G  LN 
Sbjct: 53  LPARVYVSFFRGTPLLVQLFLIYYGLPQVGIELDPIPAAMIGFSLNM 99


>gi|241113706|ref|YP_002973541.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861914|gb|ACS59580.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 276

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 8/251 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + I  L    L V               ++   L    LT++  A   VF  VLG +L+L
Sbjct: 11  IAISALAFFALVVGQSQSIQWSEIPRYLVDPSILRGVLLTLELTAGAMVFGIVLGCLLAL 70

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGST 261
            A            K +   ++  F   G+P +V I   + +    P +G  +F I  + 
Sbjct: 71  MA-----TSQNPVLKVIAAGFVWWF--RGVPLIVQIFFWFNIALFIPQVGMGSFTISIND 123

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +    ++ ++AL  + AA ++EI+R GL+AV RGQ EAA ALGL   +    V++PQA R
Sbjct: 124 LVTPALAGFLALGLHEAANMSEIIRGGLVAVDRGQREAATALGLKKTQTFLTVIMPQATR 183

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP  +Q + +LK +++   +G  DL++    I  +    IE++ +    YL+++ + 
Sbjct: 184 IIVPPTGNQAIGMLKATAIVSVIGMQDLLTQAQAIYARNFLVIELLFVASIWYLAITSVA 243

Query: 382 ALFMNRLNAKI 392
           ++  + L  ++
Sbjct: 244 SIGQHYLEKRL 254



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L    M+   ++G L+     S N ++  I   +V  FR +P +V IFF 
Sbjct: 43  ILRGVLLTLELTAGAMVFGIVLGCLLALMATSQNPVLKVIAAGFVWWFRGVPLIVQIFFW 102

Query: 149 YKSVL 153
           +   L
Sbjct: 103 FNIAL 107


>gi|226313903|ref|YP_002773799.1| L-cystine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226096853|dbj|BAH45295.1| L-cystine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 231

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 14/209 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + +F +G++L++  T L+R    K    +   Y+S  +I G P LV + + +    
Sbjct: 36  LTIAIAAFFIGLILAVL-TALARLSGIKPLIGIARFYVS--IIRGTPLLVQLFIIFY--- 89

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          +     S  I  S    A+ +E+VR+ ++++ +GQ EAA +LG+T
Sbjct: 90  --------GLPSIGLMIDPIPSAIIGFSLSVGAYSSEVVRAAILSIQKGQWEAAYSLGMT 141

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A R V+LPQA R  IPPL++ +++L+K++SLA  V   ++      ++  T + + +
Sbjct: 142 YWQALRRVVLPQAARVSIPPLSNSFISLVKDTSLASVVLVPEMFRKAQEVVAATYEPLLV 201

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 IY  +  ++++  +R+  K+   
Sbjct: 202 YAEAALIYWVICFVLSIIQDRIENKLDRY 230



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           + SS+   +    + +  +A +      I+  L    RLS  K +  I R YV + R  P
Sbjct: 20  AQSSFLPLLKGALLYSLTIAIAAFFIGLILAVLTALARLSGIKPLIGIARFYVSIIRGTP 79

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            LV +F ++  + S+  + D       G  L+
Sbjct: 80  LLVQLFIIFYGLPSIGLMIDPIPSAIIGFSLS 111


>gi|296501588|ref|YP_003663288.1| cystine transport system permease [Bacillus thuringiensis BMB171]
 gi|296322640|gb|ADH05568.1| cystine transport system permease protein [Bacillus thuringiensis
           BMB171]
          Length = 232

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 18  IMQTSFMPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--II 74

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  +  S    A+ +EI+R+ +
Sbjct: 75  RGTPLLVQLFIIF---YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASI 123

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 124 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 183

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 184 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 225



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 31  VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 90

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 91  PTLNIEVEPYTAAVVGFSLN 110


>gi|228913540|ref|ZP_04077169.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846127|gb|EEM91149.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|324324900|gb|ADY20160.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 209

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 108/216 (50%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P L
Sbjct: 1   MPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +   +  P L              + +  +  S    A+ +EI+R+ ++++P+G
Sbjct: 58  VQLFIIF---YGLPTLN--------VEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKG 106

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 107 QWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQE 166

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I     + + +      IY  +  ++++    L  +
Sbjct: 167 IAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 202



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 8   VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 67

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 68  PTLNVEVEPYTAAVVGFSLN 87


>gi|168701474|ref|ZP_02733751.1| Amino acid ABC transporter binding protein and permease protein
           [Gemmata obscuriglobus UQM 2246]
          Length = 516

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 112/219 (51%), Gaps = 12/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+      F  + ++G++++L      R +     +    +Y+   ++ G P L
Sbjct: 302 LRAARMTVFLAVTSFPLAMLVGVLVAL-----GRVYGPWPLRVPLGVYVE--VLRGTPLL 354

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   + L    P+L    ++G +  +   +   + L+   +A+ AE  R+GL+AVPRG
Sbjct: 355 LQLYFVFYL---LPLLVS-KYLGITLPNEPILFGVLGLAINYSAYEAENYRAGLLAVPRG 410

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA+ALG++   A R+V++PQA R +IPP+T+ ++ L K++S+   +   +L      
Sbjct: 411 QMEAALALGMSPLTALRVVIVPQAARIVIPPVTNDFIALFKDTSVCSVILIVELTRKYNE 470

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + N   +   ++  +   +YL +S  +A+    L  ++ 
Sbjct: 471 LYNFNREYIFQLAFLTAGLYLLMSYPLAVLAGFLERRLG 509



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 37/88 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T +LA +    A ++G LV  GR+     +     VYVEV R  P L+ ++F++  +  +
Sbjct: 308 TVFLAVTSFPLAMLVGVLVALGRVYGPWPLRVPLGVYVEVLRGTPLLLQLYFVFYLLPLL 367

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           +       +    +     GL+      
Sbjct: 368 VSKYLGITLPNEPILFGVLGLAINYSAY 395


>gi|307321129|ref|ZP_07600533.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306893204|gb|EFN23986.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 323

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 18/302 (5%)

Query: 100 AFSGMIPATI---IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           A+ G++  T    +      GRL    ++A I  +  +  R +P    +  ++  + ++L
Sbjct: 37  AWIGLVLPTSSEWLAANPALGRLVGAVMIAVIAALNWKALRQLPCRWQVAGVWLELFALL 96

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
            +  +S  L F  F+  +     +  + T   I V S  +  V++L    +++       
Sbjct: 97  MLFFYSFNLSF-AFIAKKLSFLISQGVVTTLYISVISIAVATVIALVG-AIAKLSKNGVI 154

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             L   Y S F       L L+   Y ++   P +          V     +  +ALS  
Sbjct: 155 YGLATFYTSLFR-----GLPLLMQIYIIYLGLPQV--------GYVISAVPAGILALSLC 201

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EI R+G+ ++PRGQ E A ALGL+  +   LV+LPQAMR IIPP  +Q++ +LK
Sbjct: 202 YGAYMTEIFRAGIESIPRGQTEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLK 261

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SSL   VG  +L+ +  T      + IE+++    IY  LSI +    +R+ A+     
Sbjct: 262 DSSLISVVGVWELMYLARTQGQTEFRHIEMLITASMIYWILSIGLEYMQSRVEARFGRFN 321

Query: 397 KK 398
            +
Sbjct: 322 VR 323



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 17/98 (17%)

Query: 58  SLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG 117
           +L   F++++  F I Q                 G V T +++   +  AT+I  +    
Sbjct: 104 NLSFAFIAKKLSFLISQ-----------------GVVTTLYISVISIAVATVIALVGAIA 146

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +LS N ++  +   Y  +FR +P L+ I+ +Y  +  V
Sbjct: 147 KLSKNGVIYGLATFYTSLFRGLPLLMQIYIIYLGLPQV 184


>gi|70733753|ref|YP_257393.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348052|gb|AAY95658.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 221

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 13/193 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R  H      +  +Y+S F   G P LV + + Y   +  P L              
Sbjct: 41  ALMRLSHLALVSWIARIYVSFF--RGTPLLVQLFVIY---YGLPQL--------GLELDP 87

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  +  R  +LPQAMR+ +P
Sbjct: 88  LPAALIGFSLNMAAYACEILRAAIGSIERGQWEAAASIGMTRAQTLRRAILPQAMRTALP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ ++A   
Sbjct: 148 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILASVLAHLQ 207

Query: 386 NRLNAKIALKEKK 398
           NRL  ++   +++
Sbjct: 208 NRLEERVNRHDQE 220



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RLS   LV+WI R+YV  FR  P LV +F +
Sbjct: 15  LLKGAYYTVILSLGGMFFGLLLGFGLALMRLSHLALVSWIARIYVSFFRGTPLLVQLFVI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G  LN 
Sbjct: 75  YYGLPQLGLELDPLPAALIGFSLNM 99


>gi|206968421|ref|ZP_03229377.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|218895897|ref|YP_002444308.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228899529|ref|ZP_04063785.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 4222]
 gi|228906601|ref|ZP_04070477.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 200]
 gi|228919695|ref|ZP_04083057.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228951348|ref|ZP_04113457.1| Amino acid ABC transporter [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229068525|ref|ZP_04201826.1| Amino acid ABC transporter [Bacillus cereus F65185]
 gi|229177391|ref|ZP_04304774.1| Amino acid ABC transporter [Bacillus cereus 172560W]
 gi|229189061|ref|ZP_04316089.1| Amino acid ABC transporter [Bacillus cereus ATCC 10876]
 gi|206737341|gb|EDZ54488.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|218542540|gb|ACK94934.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228594481|gb|EEK52272.1| Amino acid ABC transporter [Bacillus cereus ATCC 10876]
 gi|228606114|gb|EEK63552.1| Amino acid ABC transporter [Bacillus cereus 172560W]
 gi|228714667|gb|EEL66541.1| Amino acid ABC transporter [Bacillus cereus F65185]
 gi|228808285|gb|EEM54795.1| Amino acid ABC transporter [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228840049|gb|EEM85328.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228853150|gb|EEM97928.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 200]
 gi|228860119|gb|EEN04523.1| Amino acid ABC transporter [Bacillus thuringiensis IBL 4222]
          Length = 209

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 108/216 (50%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P L
Sbjct: 1   MPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +   +  P L              + +  +  S    A+ +EI+R+ ++++P+G
Sbjct: 58  VQLFIIF---YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKG 106

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 107 QWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQE 166

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I     + + +      IY  +  ++++    L  +
Sbjct: 167 IAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 202



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 8   VFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 67

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 68  PTLNIEVEPYTAAVVGFSLN 87


>gi|206563412|ref|YP_002234175.1| ABC transporter ATP-binding membrane protein [Burkholderia
           cenocepacia J2315]
 gi|198039452|emb|CAR55419.1| ABC transporter ATP-binding membrane protein [Burkholderia
           cenocepacia J2315]
          Length = 599

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 1/255 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ +  +  ++ S+L  P     +    FL+   LS    T+       VF FVLG  ++
Sbjct: 41  VLALVLIALTLHSILGNPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGFVLGAFVA 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     SR         + L      ++  L    L  L   +    P      F   +T
Sbjct: 101 LARLSRSRLLSASAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTT 160

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F++  + L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAM
Sbjct: 161 DLISPFLAAVLGLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTSRIVLPQAM 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P   +  + L K +S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 221 RAILPTAFNDLITLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 280

Query: 381 IALFMNRLNAKIALK 395
           ++    ++    A  
Sbjct: 281 LSAIQVQVERHYARG 295



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +   ++G  V   RLS ++L++     +V +FR+IP       + 
Sbjct: 75  LSGLARTLVLTLLGAVFGFVLGAFVALARLSRSRLLSASAWTFVWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTL 175


>gi|206577524|ref|YP_002237665.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288934542|ref|YP_003438601.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290508742|ref|ZP_06548113.1| polar amino acid transport system ATP-binding protein [Klebsiella
           sp. 1_1_55]
 gi|206566582|gb|ACI08358.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288889251|gb|ADC57569.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289778136|gb|EFD86133.1| polar amino acid transport system ATP-binding protein [Klebsiella
           sp. 1_1_55]
          Length = 312

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 68/281 (24%), Positives = 125/281 (44%), Gaps = 16/281 (5%)

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           +  I + Y+   R I  L+V+  L     S+L  P     +    F     +    +T+ 
Sbjct: 13  LRIIGKKYIG--RWISALIVLLILLAMGNSMLSNPRFEWSVIAENFTGPSIIQGVLMTLQ 70

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   +F F  G +L+L      R        A+   Y   F   G+P LV + L Y +
Sbjct: 71  LTAISVIFGFAGGTILALM-----RLSSNPVLVAVSWGYTWFF--RGVPMLVQLFLWYNI 123

Query: 245 -------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
                      P +G+      +++   F +  IAL  + +A+ AEI+R+G+ +V  GQ+
Sbjct: 124 AALYPTISISLPWVGEIWSASANSLISPFSAAVIALVMHQSAYAAEIIRAGIQSVGTGQV 183

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALG    +     +LPQAMR+I+PP  ++ +  LK +++   +   D++     I 
Sbjct: 184 EAARALGYRPAQIFLHTILPQAMRAILPPAGNEVIGQLKTTAVVSVISLQDVLFSAQIIY 243

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +T + I ++L+    YL L+ ++++    +    +    +
Sbjct: 244 QRTYEVIPLLLVATLWYLLLTSLLSVIQYYVERHFSRSSHR 284



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T  L    +I     GT++   RLS+N ++  +   Y   FR +P LV +F  
Sbjct: 61  IIQGVLMTLQLTAISVIFGFAGGTILALMRLSSNPVLVAVSWGYTWFFRGVPMLVQLFLW 120

Query: 149 YKS 151
           Y  
Sbjct: 121 YNI 123


>gi|134300076|ref|YP_001113572.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum reducens MI-1]
 gi|134052776|gb|ABO50747.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 255

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 98/239 (41%), Gaps = 17/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-----FATRLSRHFHE 213
                ++          +    +T+  +    +  F++G+++ +        R  +    
Sbjct: 1   MTFEWIVKIISDYGPMFIRGAGVTLLISIIGTIVGFIIGLLVGIIRTIPMPERGGKRVTI 60

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K   A+   YI  F   G P +V   + Y              +         ++    +
Sbjct: 61  KIINAILSAYIEFF--RGTPMIVQAMVIYYGS----------ALAFGVDMNRLVAAIFIV 108

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  T A+++EIVR G+I++ +GQ EAA A+G+ H +    V++PQ +R+I+P   ++++ 
Sbjct: 109 SINTGAYMSEIVRGGIISIDKGQFEAAHAIGMNHVQTMFNVIIPQVIRNILPATGNEFII 168

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K++S+   +   +L     ++     +  E   +   IY  ++  +   +     K+
Sbjct: 169 NIKDTSVLNVISVTELFFQTKSVAGNNFRYFESFFVACIIYFIMTYTVTRILRYFERKL 227



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVY 132
           S Y    + G   T  ++  G I   IIG LVG  R              K++  I   Y
Sbjct: 11  SDYGPMFIRGAGVTLLISIIGTIVGFIIGLLVGIIRTIPMPERGGKRVTIKIINAILSAY 70

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           +E FR  P +V    +Y       
Sbjct: 71  IEFFRGTPMIVQAMVIYYGSALAF 94


>gi|311108218|ref|YP_003981071.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 18 [Achromobacter
           xylosoxidans A8]
 gi|310762907|gb|ADP18356.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 18
           [Achromobacter xylosoxidans A8]
          Length = 230

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +F  S  L + L L    L R    +        YI   +I G P L+ +   + +
Sbjct: 19  WTLALFFCSAFLAVALGLLVC-LCRLSPSRLLSRGARFYID--VIRGTPLLLQL---FYI 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  P +          V   F++  + L+    A++AE+ RSG+ +V  GQ EAA ALG
Sbjct: 73  YYGLPEM--------GVVINGFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  R ++LPQA+R++ P L +  L L+K +SL   +   +L+  G  +   T QA+
Sbjct: 125 LGKVQRLRRIVLPQALRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATFQAL 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  +   IY ++  ++A    R   ++ +
Sbjct: 185 TVYTMVGVIYFAMCSVLAYLFRRSEKRLTV 214



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 11/178 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G V T  L F     A  +G LV   RLS ++L++   R Y++V R  P L+ 
Sbjct: 9   YLAPLAEGTVWTLALFFCSAFLAVALGLLVCLCRLSPSRLLSRGARFYIDVIRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA-----KIFVFSFVLGIV 199
           +F++Y  +  +  + +  +    G+ LN              +          +  LG V
Sbjct: 69  LFYIYYGLPEMGVVINGFVAGVLGLTLNFGAYLAELFRSGIQSVDSGQYEAARALGLGKV 128

Query: 200 LSLFATRLSRHFHEKTGK-ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
                 RL R    +  +   P L     ++    +LV +   Y+L     +L    F
Sbjct: 129 -----QRLRRIVLPQALRTVFPALGNYALVLIKETSLVAVISVYELMRAGEMLAGATF 181


>gi|269104573|ref|ZP_06157269.1| amino acid ABC transporter permease protein [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268161213|gb|EEZ39710.1| amino acid ABC transporter permease protein [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 280

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 19/240 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
                IP +  V   G +     +    +T+  +A   +F+  LG++ +L      R   
Sbjct: 54  WQWHQIPQYLFVHEDGEWYRGELIDGLLITLKISAVSLIFTLGLGLITALL-----RLSD 108

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
              G+AL   YI   LI   P LV I + Y +            +G       F +  +A
Sbjct: 109 SIVGRALARGYIE--LIRNTPLLVQIYILYFV------------LGPILDLERFTTAVLA 154

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS +  A+ AEI R+GL A+P+GQ EAA +LGL+  +  R V+LPQ ++ I+PPLT++ +
Sbjct: 155 LSLFQGAYTAEIFRAGLNAIPKGQFEAAASLGLSQWQMYRFVILPQVIKRILPPLTNETV 214

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L+KNSS+   +   DL + G  I+  T    E+      IYL ++++++     +  ++
Sbjct: 215 SLVKNSSIVSIMAIFDLTTEGRNIVADTAMPFEVWFTVAAIYLCVTLLLSAVAAWMAHRL 274



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 51/122 (41%), Gaps = 11/122 (9%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           ++   L+  +  W +++  + M          +       +I Q +  +     Y   ++
Sbjct: 29  LVQIGLVIAVLGWILSSGADAM-------NYRWQWH----QIPQYLFVHEDGEWYRGELI 77

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G + T  ++   +I    +G +    RLS + +   + R Y+E+ RN P LV I+ LY 
Sbjct: 78  DGLLITLKISAVSLIFTLGLGLITALLRLSDSIVGRALARGYIELIRNTPLLVQIYILYF 137

Query: 151 SV 152
            +
Sbjct: 138 VL 139


>gi|52144470|ref|YP_082358.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|301052511|ref|YP_003790722.1| amino acid ABC transporter permease [Bacillus anthracis CI]
 gi|51977939|gb|AAU19489.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|300374680|gb|ADK03584.1| amino acid ABC transporter, permease [Bacillus cereus biovar
           anthracis str. CI]
          Length = 232

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 18  IMQTSFMPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--II 74

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  +  S    A+ +EI+R+ +
Sbjct: 75  RGTPLLVQLFIIF---YGLPTLN--------VEVEPYTAAVVGFSLNVGAYASEIIRASI 123

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 124 LSIPKGQWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 183

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY  +  ++++    L  +
Sbjct: 184 FRKAQEIAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 225



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 31  VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 90

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 91  PTLNVEVEPYTAAVVGFSLN 110


>gi|238786810|ref|ZP_04630611.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia frederiksenii ATCC
           33641]
 gi|238725178|gb|EEQ16817.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia frederiksenii ATCC
           33641]
          Length = 255

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 21/252 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F   +                K  +   +LG    L    L R      G   P+LY   
Sbjct: 4   FRWEIIQEYAPLFMDGAWMTIKCTIICVILGTTWGLTLG-LGRLAQAPHGIWKPVLYYFV 62

Query: 227 FL--------IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EF 266
                     I G P  V I + +       +  +   +  + +               F
Sbjct: 63  QWPVRIYISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAF 122

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++PP
Sbjct: 123 LSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPP 182

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + ++K+SSLA A+G ADL     T+        E  L    +Y  ++ +++L + 
Sbjct: 183 LGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLAISLVYWVITFLLSLLVR 242

Query: 387 RLNAKIALKEKK 398
            +  +    + +
Sbjct: 243 HMEKRFGKSDSR 254



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVY 132
             YA   + G   T       +I  T  G  +G GRL+              V W  R+Y
Sbjct: 10  QEYAPLFMDGAWMTIKCTIICVILGTTWGLTLGLGRLAQAPHGIWKPVLYYFVQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +   R  P  V I  ++ +++ +   P   I++  G+  ++      +      + I   
Sbjct: 70  ISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCIVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|242279754|ref|YP_002991883.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122648|gb|ACS80344.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 222

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 15/230 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +F +   +    L +     +    F      +    +LSR+F  +         +   
Sbjct: 8   SVFWDTFPMLMRGLKLTIEITVGGLFFGFLFGSAAGLMKLSRNFFTRKIAG-----VYVE 62

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV       L++  P+             P   +  I ++  + A+IAEIVR 
Sbjct: 63  AIRGTPMLVQAMF---LYYGVPMAIGMRI-------PPMTAGIIIIAVNSGAYIAEIVRG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++ +GQ EA  ++GLT+ +  R ++ PQA++ +IPPL +Q++  LK++SL + +G  
Sbjct: 113 AVQSINKGQFEAGRSIGLTNTQTMRFIIWPQALKRMIPPLGNQFIISLKDTSLLMVIGVG 172

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L+  G  I +   +A E+ L    +YL +++ IA  M R+  K+    +
Sbjct: 173 ELMRTGQEITSVNFRAFEVYLAVACVYLVMTLSIAFAMRRIEKKLNTSRR 222



 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +   G+    + G+  G  +LS N     I  VYVE  R  P LV   FL
Sbjct: 17  LMRGLKLTIEITVGGLFFGFLFGSAAGLMKLSRNFFTRKIAGVYVEAIRGTPMLVQAMFL 76

Query: 149 YKSVLSVLPIPDHSIV 164
           Y  V   + +    + 
Sbjct: 77  YYGVPMAIGMRIPPMT 92


>gi|15966713|ref|NP_387066.1| putative amino-acid transport system permease ABC transporter
           protein [Sinorhizobium meliloti 1021]
 gi|307300252|ref|ZP_07580032.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15075985|emb|CAC47539.1| Putative DL-2-aminoadipic acid ABC transporter, permease component
           [Sinorhizobium meliloti 1021]
 gi|306904418|gb|EFN35002.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 323

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 18/302 (5%)

Query: 100 AFSGMIPATI---IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
           A+ G++  T    +      GRL    ++A I  +  +  R +P    +  ++  + ++L
Sbjct: 37  AWIGLVLPTSSEWLAANPALGRLVGAVMIAVIAALNWKALRQLPRRWQVAGVWLELFALL 96

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
            +  +S  L F  F+  +     +  + T   I V S  +  V++L    +++       
Sbjct: 97  MLFFYSFNLSF-AFIAKKLSFLISQGVVTTLYISVISIAVATVIALVG-AIAKLSKNGVI 154

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             L   Y S F       L L+   Y ++   P +          V     +  +ALS  
Sbjct: 155 YGLATFYTSLFR-----GLPLLMQIYIIYLGLPQV--------GYVISAVPAGILALSLC 201

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++ EI R+G+ ++PRGQ E A ALGL+  +   LV+LPQAMR IIPP  +Q++ +LK
Sbjct: 202 YGAYMTEIFRAGIESIPRGQTEGATALGLSPSQTMGLVILPQAMRVIIPPTGNQFIAMLK 261

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SSL   VG  +L+ +  T      + IE+++    IY  LSI +    +R+ A+     
Sbjct: 262 DSSLISVVGVWELMYLARTQGQTEFRHIEMLITASMIYWILSIGLEYMQSRVEARFGRFN 321

Query: 397 KK 398
            +
Sbjct: 322 VR 323



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 29/134 (21%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R   ++   +    L ++F +  N            L   F++++  F I Q       
Sbjct: 80  PRRWQVAGVWLELFALLMLFFYSFN------------LSFAFIAKKLSFLISQ------- 120

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                     G V T +++   +  AT+I  +    +LS N ++  +   Y  +FR +P 
Sbjct: 121 ----------GVVTTLYISVISIAVATVIALVGAIAKLSKNGVIYGLATFYTSLFRGLPL 170

Query: 142 LVVIFFLYKSVLSV 155
           L+ I+ +Y  +  V
Sbjct: 171 LMQIYIIYLGLPQV 184


>gi|78357350|ref|YP_388799.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78219755|gb|ABB39104.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 261

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 109/228 (47%), Gaps = 15/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +  R L +    +    K+ + S +  I L L           K    +   Y+   ++
Sbjct: 48  DVYWRLLQYLPDGIAVTFKVTILSILCSIPLGLLTGLGR-LSRNKLINTIASTYVE--VV 104

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV +   Y              +G     P  ++  IA+S    A++ E+ R+G+
Sbjct: 105 RGIPLLVQLFYIYY------------ALGRFLQVPSMVAAVIAMSVCYGAYMGEVFRAGI 152

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +LG  + +   LV+LPQA R+I+PP+ ++++ +LK++SL   +  AD+
Sbjct: 153 DSIDKGQTEASRSLGFNNVQTMFLVILPQAWRTILPPVGNEFIAMLKDTSLVSILAVADV 212

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  G     ++    E   +   IYL ++++++  ++ + A++   ++
Sbjct: 213 LRRGREFAAESFLYFETYTMVALIYLVITLLLSKAVSIMEARLNYYDR 260



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 40/78 (51%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +  G   TF +    ++ +  +G L G GRLS NKL+  I   YVEV R IP L
Sbjct: 51  WRLLQYLPDGIAVTFKVTILSILCSIPLGLLTGLGRLSRNKLINTIASTYVEVVRGIPLL 110

Query: 143 VVIFFLYKSVLSVLPIPD 160
           V +F++Y ++   L +P 
Sbjct: 111 VQLFYIYYALGRFLQVPS 128


>gi|331698685|ref|YP_004334924.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
 gi|326953374|gb|AEA27071.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
          Length = 336

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 109/247 (44%), Gaps = 11/247 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P          FL    L    +T+   A   VF  + G+VL+L      R       +
Sbjct: 68  NPYFQWDRFGYWFLRPVVLEGLLITLKVTALSAVFGLLGGVVLALC-----RLSRSPVLQ 122

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +   Y+  F    L  L+L    +      L    P    F     + ++ E +   + 
Sbjct: 123 LVSWGYVWLFRSVPLIVLLLFLYNFSALYPSLGLGVPFGPTFVQFDETALATEIVIAVVG 182

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ AE+VR G+++V +GQ EAA ALGL  R   R ++ PQA+RSI+P   +Q +
Sbjct: 183 LSLNEAAYAAEVVRGGILSVDQGQHEAAAALGLPRRYQFRRIVAPQALRSIVPNYVNQLI 242

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            L+K++SL   V   DL     ++ +   G  + ++++    Y+ L+ ++++    +  +
Sbjct: 243 GLIKSTSLVFYVSLLDLFGQVQSLGSTYPGDIVPLLMVATVWYVILTSIVSVVQYYVERR 302

Query: 392 IALKEKK 398
            A    +
Sbjct: 303 FARGSVR 309



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 71  EIDQGIV--PYTSDSSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           +I  G+V  PY     +    L      G + T  +     +   + G ++   RLS + 
Sbjct: 60  QIGHGLVTNPYFQWDRFGYWFLRPVVLEGLLITLKVTALSAVFGLLGGVVLALCRLSRSP 119

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYK 150
           ++  +   YV +FR++P +V++ FLY 
Sbjct: 120 VLQLVSWGYVWLFRSVPLIVLLLFLYN 146


>gi|313887599|ref|ZP_07821282.1| putative arginine ABC transporter, permease protein ArtQ
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846477|gb|EFR33855.1| putative arginine ABC transporter, permease protein ArtQ
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 224

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 121/232 (52%), Gaps = 13/232 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + F        L+    T++ +    +  F LG++L+L      +    K    L  
Sbjct: 4   MNQISFIERYLPTYLNGAITTIELSIIGVILGFTLGVILALM-----KISKLKIFNILSS 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YI   ++ G P LV I + Y     K +  QF  +      P F+   +++S  +AA+I
Sbjct: 59  VYIE--IVRGTPMLVQIMIVY-FGLKKIIPEQFTLLTA----PMFLCA-LSISLNSAAYI 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+RSG+ +V  GQMEAA +LGL  ++A R +++PQA+++I+P L ++++ L+K SS+ 
Sbjct: 111 AEIIRSGISSVDYGQMEAARSLGLNEKQAMRKIIMPQAIKNILPALVNEFITLIKESSIT 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             VG  +L+  G +I + T + +   +    IY  ++  ++  M RL  ++A
Sbjct: 171 YTVGVGELMYAGKSISSGTFELVRPFIFTACIYFIMTFSLSKAMGRLERRLA 222



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 39/87 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G + T  L+  G+I    +G ++   ++S  K+   +  VY+E+ R  P L
Sbjct: 11  ERYLPTYLNGAITTIELSIIGVILGFTLGVILALMKISKLKIFNILSSVYIEIVRGTPML 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V I  +Y  +  ++P     +  P  +
Sbjct: 71  VQIMIVYFGLKKIIPEQFTLLTAPMFL 97


>gi|228932271|ref|ZP_04095155.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827396|gb|EEM73146.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 209

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 108/216 (50%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P L
Sbjct: 1   MPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +   +  P L              + +  I  S    A+ +EI+R+ ++++P+G
Sbjct: 58  VQLFIIF---YGLPTLN--------VEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKG 106

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 107 QWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQE 166

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I     + + I      IY  +  ++++    L  +
Sbjct: 167 IAAMNYEFLIIYFEAGLIYWVICFLLSIVQQMLEKR 202



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 8   VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 67

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 68  PTLNVEVEPYTAAVIGFSLN 87


>gi|163938764|ref|YP_001643648.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|163860961|gb|ABY42020.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
          Length = 232

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +FV+GI+L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 32  FTTIPLTLITFVIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 87

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 88  --YGLPTLN--------IEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 137

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 138 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 197

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY  +  ++++    L  +
Sbjct: 198 LIVYFEAGLIYWVICFLLSIVQQILEKR 225



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            +S+A  +      T  L     +   I+ TL    R+S ++++ WI R+YV + R  P 
Sbjct: 20  QTSFAPMLKEAVFTTIPLTLITFVIGIILATLTALARISGSRILQWIARIYVSIIRGTPL 79

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + ++    +       G  LN
Sbjct: 80  LVQLFIIFYGLPTLNIEVEPYTAAVIGFSLN 110


>gi|298293508|ref|YP_003695447.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930019|gb|ADH90828.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 226

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 110/216 (50%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF LG+ L  F T L+R +  +    L   Y+  ++I G P LV + 
Sbjct: 17  WAGLVFTVPLTLLSFALGLTLG-FLTALARLYGPRPLAGLARFYV--WIIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EIVR+ + ++P+GQ EA
Sbjct: 74  VIFY-----------GLPSVGILLDAFPAALIGFTLNVGAYSSEIVRAVIASIPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           + ++G++  +A R  +LPQA R+ +PPL++ +++L+K++SLA AV   +L      I+  
Sbjct: 123 SYSIGMSWSQALRRTVLPQAARTAVPPLSNTFISLVKDTSLAAAVTVPELFQAAQRIVAV 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + I +    IYL+LS +++   +RL  ++A  
Sbjct: 183 TYEPLIIYIEAALIYLALSSVLSALQDRLEKRLARS 218



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +  G V T  L          +G L    RL   + +A + R YV + R  P L
Sbjct: 10  QSLGPLLWAGLVFTVPLTLLSFALGLTLGFLTALARLYGPRPLAGLARFYVWIIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV  + D       G  LN
Sbjct: 70  VQLFVIFYGLPSVGILLDAFPAALIGFTLN 99


>gi|118469246|ref|YP_885991.1| polar amino acid ABC transporter inner membrane protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118170533|gb|ABK71429.1| ABC polar amino acid transporter, inner membrane subunit
           [Mycobacterium smegmatis str. MC2 155]
          Length = 263

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 119/241 (49%), Gaps = 10/241 (4%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
              D +      +  ++  L    LT+  +    V + V G++++L      R       
Sbjct: 1   MNFDWTFFWKSLLTPSDAFLQGLVLTIVISVVAMVLATVAGLIVALM-----RRSRLPAV 55

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG--GSTVSPEFMSLYIALS 274
           + +  +YI  ++I G P LV + L Y        L QF+ +   G +V     +  I L 
Sbjct: 56  RWVAGVYI--WVIRGTPLLVQLVLIY-TGLAAAGLYQFHDVSLLGLSVKAALQAAIIGLM 112

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              +A+IAEI+R+GL +VP+GQ EAA +LG+   K  R +++PQA+R ++PP+ + +  L
Sbjct: 113 INESAYIAEIIRAGLDSVPKGQFEAAASLGMKPAKVMRWIIVPQALRVMVPPMGNSFNGL 172

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +K +S+   +G +++  V  +I + T    EI ++    YL+L+ +       +  ++A 
Sbjct: 173 MKTTSVLSVIGVSEMFLVTQSISSATFHTFEIFIVAAIYYLALTTIWTFIQAGIENRLAR 232

Query: 395 K 395
           +
Sbjct: 233 Q 233



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 36/81 (44%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A L G V T  ++   M+ AT+ G +V   R S    V W+  VY+ V R  P LV + 
Sbjct: 17  DAFLQGLVLTIVISVVAMVLATVAGLIVALMRRSRLPAVRWVAGVYIWVIRGTPLLVQLV 76

Query: 147 FLYKSVLSVLPIPDHSIVLPF 167
            +Y  + +      H + L  
Sbjct: 77  LIYTGLAAAGLYQFHDVSLLG 97


>gi|153834291|ref|ZP_01986958.1| ABC-type glutamine transport system, permease component [Vibrio
           harveyi HY01]
 gi|148869299|gb|EDL68313.1| ABC-type glutamine transport system, permease component [Vibrio
           harveyi HY01]
          Length = 246

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 119/245 (48%), Gaps = 29/245 (11%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSR 209
                       G+      ++    T+  +    +F+  +G++++L A       +   
Sbjct: 22  WGWYVLDPSTEQGLTNIKFLVAGFNDTIQVSLLSMLFAMTIGLIVALPALSDSPALKWIN 81

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + +  +++P+L +  ++ +G+PTL+ ++L +                       F + 
Sbjct: 82  RVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-----------------------FWAG 118

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA R I+PPL +
Sbjct: 119 VIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGN 178

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++ +LK SSL   +G +DL      ++      +EI    +  YL L ++++  +  L 
Sbjct: 179 QFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLE 238

Query: 390 AKIAL 394
            +IA+
Sbjct: 239 KRIAI 243



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 40/70 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    ++ GF +T  ++   M+ A  IG +V    LS +  + WI RVYVEV R+IP LV
Sbjct: 36  TNIKFLVAGFNDTIQVSLLSMLFAMTIGLIVALPALSDSPALKWINRVYVEVIRSIPVLV 95

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 96  LLLWVYYGMP 105


>gi|296167082|ref|ZP_06849493.1| GlnQ protein [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897572|gb|EFG77167.1| GlnQ protein [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 605

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 20/214 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V    LG+VL+     ++   + +  +    +Y   F   GLP +V+I L       
Sbjct: 388 SAIVIGLALGMVLA-----MAGISNRRWLRWPARVYTDIF--RGLPEVVIILLI------ 434

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +G    +GG T    +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG ++
Sbjct: 435 --GMGVGPLVGGLTNKNPYPLGIAALGLMAAAYIGEILRSGIQSVDPGQLEASRALGFSY 492

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQA 363
             A RLV++PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  QTG +
Sbjct: 493 PTAMRLVVVPQGIRRVLPALVNQFIGLLKASALVYFLGLIAEQRELFQVGRDLNAQTG-S 551

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  ++     YL L+I +   +N ++A++    +
Sbjct: 552 LSPLVAAGLFYLILTIPLTHLVNYIDARLRRGRR 585



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 85  YATAILV----GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           Y  AI V    G  NT  L  S ++    +G ++    +S  + + W  RVY ++FR +P
Sbjct: 367 YRRAIPVLLTTGLPNTLILTNSAIVIGLALGMVLAMAGISNRRWLRWPARVYTDIFRGLP 426

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            +V+I  +   V  ++    +    P G+
Sbjct: 427 EVVIILLIGMGVGPLVGGLTNKNPYPLGI 455


>gi|11497848|ref|NP_069070.1| glutamine ABC transporter, permease protein (glnP) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2650409|gb|AAB91000.1| glutamine ABC transporter, permease protein (glnP) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 224

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 75/233 (32%), Positives = 116/233 (49%), Gaps = 14/233 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + L  R L           K+ + S   G+++   A  L R        A+   Y+ 
Sbjct: 6   QFDIDLFIRILPDLAFGASVTLKLTLISIFFGLIIGTIAG-LGRVSKNPLPFAISTAYVE 64

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I G P LV I + Y   F  P +       G  + PE  +  IALS  + A+IAEIV
Sbjct: 65  --VIRGTPLLVQILIVY---FGLPAI-------GINLQPE-PAGIIALSICSGAYIAEIV 111

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++P GQMEAA +LG+T+ +A R V+ PQA R+I+P L ++++ LLK+SSL   + 
Sbjct: 112 RAGIESIPIGQMEAARSLGMTYLQAMRYVIFPQAFRNILPALGNEFIALLKDSSLLSVIS 171

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +L  VG  I+N T  A    L     YL ++I ++  +     K+   + K
Sbjct: 172 IVELTRVGRQIVNTTFNAWTPFLGVALFYLMMTIPLSRLVAYSQKKLGTYQVK 224



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    +    IIGT+ G GR+S N L   I   YVEV R  P LV I  +
Sbjct: 19  LAFGASVTLKLTLISIFFGLIIGTIAGLGRVSKNPLPFAISTAYVEVIRGTPLLVQILIV 78

Query: 149 YKSVLSVLPI 158
           Y  + ++   
Sbjct: 79  YFGLPAIGIN 88


>gi|167043000|gb|ABZ07713.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_ANIW137P11]
          Length = 684

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 71/301 (23%), Positives = 128/301 (42%), Gaps = 15/301 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF+ T  +   G++    IGT++   + + N L     R  +   + +  ++    +
Sbjct: 365 LLGGFLATIKIVGFGILFGFFIGTVLALFKTAPNSLKQIFERYSLTTVKTLGGVL---SI 421

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS------- 201
               L +        +   G+      +  P         + + +  +  VL+       
Sbjct: 422 SGFYLLMTGGSRFGALGLDGIEYIYTPVGDPRGFGIFVLGLAMAAVGVQFVLADQKLTGP 481

Query: 202 LFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           LF  R        +    +  PL+    F+ FG+   + I   Y+ +F        ++  
Sbjct: 482 LFKIRPLNSIATVYTDFFRNTPLIVQFMFIHFGVGIGLKIQKAYEGNFGDMGTDGLDYF- 540

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                  F+S    L   + A+  E +R  + A+P GQMEA  ++GLT+    RLV+LPQ
Sbjct: 541 -FFGQSAFISAIFTLGLNSGAYQCETIRGAIAAIPTGQMEAGRSIGLTYMGTMRLVILPQ 599

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  IPPL ++ +NL+ NSSLA+ +G+++L   G  II  T Q      + M  Y  ++
Sbjct: 600 AIRICIPPLGNEMVNLVLNSSLAMVIGYSELARQGRLIIAVTFQIFWAWGMVMISYFVIT 659

Query: 379 I 379
            
Sbjct: 660 W 660


>gi|319781053|ref|YP_004140529.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166941|gb|ADV10479.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 226

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SFVLG+ + L A  L+R F  K   AL   Y+  F   G P LV + 
Sbjct: 17  WAALIFTVPLTLLSFVLGLTVGLGA-ALARLFGPKPLVALVRFYVWIF--RGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  LIFY-----------GLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G+T  +A R  +LPQA R  +PPL++ +++L+K++SLA A+   ++      I+  
Sbjct: 123 AYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    +YL+LS +++    RL  ++   
Sbjct: 183 TYEPLILYVEAAILYLALSSVLSALQTRLETRLNRY 218



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +    + T  L     +    +G      RL   K +  + R YV +FR  P LV +F +
Sbjct: 16  LWAALIFTVPLTLLSFVLGLTVGLGAALARLFGPKPLVALVRFYVWIFRGTPLLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + SV  + D       G  LN
Sbjct: 76  FYGLPSVGILLDAFTAALIGFTLN 99


>gi|209965982|ref|YP_002298897.1| amino acid ABC transporter, permease protein [Rhodospirillum
           centenum SW]
 gi|209959448|gb|ACJ00085.1| amino acid ABC transporter, permease protein [Rhodospirillum
           centenum SW]
          Length = 226

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 13/226 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           ++   S VLG+VL++    L R    +    L   Y  TFL    P L
Sbjct: 10  LPQLLSGTVVTVELVALSLVLGLVLAVGIAVL-RLSGIRAVSMLAGGY--TFLFRSTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           V I L Y        LGQF  +  S + P     +    +AL+  TAA+  EI+R G+ A
Sbjct: 67  VQIFLIYY------GLGQFETVRESILWPFLREPYWCAILALTLNTAAYTGEIIRGGIRA 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ+EAA A+G++ R   R ++LPQA R  +P   ++ + +++ SSLA  +   +L  
Sbjct: 121 VPFGQIEAARAVGMSGRLLFRRIVLPQAFRQALPAYGNEMIQMVQASSLASTITLMELTG 180

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I ++T Q +E+ +I   +YL+++  +   +    A++A + +
Sbjct: 181 AARAIASRTFQPVEVFVIAGALYLAMNYALTRIVRAAEARLAHERR 226



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L    ++   ++   +   RLS  + V+ +   Y  +FR+ P LV IF +
Sbjct: 13  LLSGTVVTVELVALSLVLGLVLAVGIAVLRLSGIRAVSMLAGGYTFLFRSTPLLVQIFLI 72

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 73  YYGLGQF 79


>gi|206975732|ref|ZP_03236644.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217958459|ref|YP_002337007.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|218232526|ref|YP_002365642.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|228938118|ref|ZP_04100738.1| Amino acid ABC transporter [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228970993|ref|ZP_04131630.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977596|ref|ZP_04137988.1| Amino acid ABC transporter [Bacillus thuringiensis Bt407]
 gi|228984046|ref|ZP_04144235.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229042723|ref|ZP_04190463.1| Amino acid ABC transporter [Bacillus cereus AH676]
 gi|229108461|ref|ZP_04238078.1| Amino acid ABC transporter [Bacillus cereus Rock1-15]
 gi|229143577|ref|ZP_04272002.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST24]
 gi|229149192|ref|ZP_04277433.1| Amino acid ABC transporter [Bacillus cereus m1550]
 gi|206746194|gb|EDZ57589.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217067339|gb|ACJ81589.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|218160483|gb|ACK60475.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|228634391|gb|EEK90979.1| Amino acid ABC transporter [Bacillus cereus m1550]
 gi|228639933|gb|EEK96338.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST24]
 gi|228675088|gb|EEL30315.1| Amino acid ABC transporter [Bacillus cereus Rock1-15]
 gi|228726663|gb|EEL77880.1| Amino acid ABC transporter [Bacillus cereus AH676]
 gi|228775726|gb|EEM24103.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228782240|gb|EEM30426.1| Amino acid ABC transporter [Bacillus thuringiensis Bt407]
 gi|228788802|gb|EEM36744.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821603|gb|EEM67608.1| Amino acid ABC transporter [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938619|gb|AEA14515.1| cystine transport system permease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 209

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 108/216 (50%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      + T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P L
Sbjct: 1   MPMLKEAVFTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +   +  P L              + +  +  S    A+ +EI+R+ ++++P+G
Sbjct: 58  VQLFIIF---YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKG 106

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 107 QWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQE 166

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I     + + +      IY  +  ++++    L  +
Sbjct: 167 IAAMNYEFLIVYFEAGLIYWVICFLLSIVQQMLEKR 202



 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 8   VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 67

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 68  PTLNIEVEPYTAAVVGFSLN 87


>gi|57234795|ref|YP_181163.1| His/Glu/Gln/Arg/opine ABC transporter permease [Dehalococcoides
           ethenogenes 195]
 gi|57225243|gb|AAW40300.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Dehalococcoides ethenogenes 195]
          Length = 273

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 124/253 (49%), Gaps = 14/253 (5%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
             L          ++ F          +  + +     + V S+ L ++L +F   L R 
Sbjct: 28  WWLVAGVFVLTGGLMLFQPDPFLDIFKYVWVGIGITVLVAVVSYFLMLILGMFG-ALGRL 86

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-------FNFIGGSTVS 263
                 + L   Y+   ++ G+P LV +   Y   F  PV+ Q       F  +     +
Sbjct: 87  SKNTILRGLATFYVE--IVRGIPLLVQLIWWY---FAFPVIIQSIGQGLNFGPMMNYQAN 141

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  M+++  ++    A+++EI R+G+ ++P+GQMEAA +LG++H +A R V+LPQA+R +
Sbjct: 142 PIVMAIW-GMTFCYGAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRYVILPQALRVV 200

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP+ ++++ LLK++SL   V  AD+V +G          IE+  +   +YL L+++ + 
Sbjct: 201 LPPMGNEFIALLKDTSLVSTVAVADMVRLGREFTATNFNPIEVWTMIGLLYLILTLLSSR 260

Query: 384 FMNRLNAKIALKE 396
            +N +  K A   
Sbjct: 261 LINYIEKKTAFSR 273



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 36/102 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               + VG   T  +A        I+G     GRLS N ++  +   YVE+ R IP LV 
Sbjct: 52  IFKYVWVGIGITVLVAVVSYFLMLILGMFGALGRLSKNTILRGLATFYVEIVRGIPLLVQ 111

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           + + Y +   ++      +     M      +      M   
Sbjct: 112 LIWWYFAFPVIIQSIGQGLNFGPMMNYQANPIVMAIWGMTFC 153


>gi|325832049|ref|ZP_08165146.1| ABC transporter, permease protein [Eggerthella sp. HGA1]
 gi|325486370|gb|EGC88822.1| ABC transporter, permease protein [Eggerthella sp. HGA1]
          Length = 370

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                   +   T   I V + V+ + L +    LS        + +  +Y+   ++  +
Sbjct: 14  FERWPDILMAFGTTVGISVLALVIALALGIVFGVLS-VSRIPVLRGITRVYVE--VVQNV 70

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + + Y +         F  +G S     F    +A+  Y   +I+E+VRSG+ ++
Sbjct: 71  PLLLQVFVFYAI---------FPLLGLSL--AAFWIGVLAIGIYHGGYISEVVRSGIGSI 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA + G ++ ++  +++LPQA+R I+PPL  Q  NL+KN+S+   +   +L+  
Sbjct: 120 HRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQAANLVKNTSVLALIAGGELMYF 179

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +    T     + ++   +Y ++   ++     L  +
Sbjct: 180 SNSFAGATSYYGPVYVVAALLYFAICFPLSRLALYLEHR 218



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 70/200 (35%), Gaps = 16/200 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL+ F  T  ++   ++ A  +G + G   +S   ++  I RVYVEV +N+P L+ +F  
Sbjct: 20  ILMAFGTTVGISVLALVIALALGIVFGVLSVSRIPVLRGITRVYVEVVQNVPLLLQVFVF 79

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN---------RGLSFPTLTMDTNAKIFVFSFVLGIV 199
           Y     +        +    + + +          G+          AK   FS+   + 
Sbjct: 80  YAIFPLLGLSLAAFWIGVLAIGIYHGGYISEVVRSGIGSIHRGQFEAAKSQGFSYWQSMF 139

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           + +    +            PL   +  L+     L LIA    ++F     G  ++ G 
Sbjct: 140 VIILPQAIRIIMP-------PLAVQAANLVKNTSVLALIAGGELMYFSNSFAGATSYYGP 192

Query: 260 STVSPEFMSLYIALSCYTAA 279
             V    +   I       A
Sbjct: 193 VYVVAALLYFAICFPLSRLA 212


>gi|229028650|ref|ZP_04184764.1| Amino acid ABC transporter [Bacillus cereus AH1271]
 gi|228732669|gb|EEL83537.1| Amino acid ABC transporter [Bacillus cereus AH1271]
          Length = 209

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 108/216 (50%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      + T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P L
Sbjct: 1   MPMLKEAVFTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +   +  P L              + +  I  S    A+ +EI+R+ ++++P+G
Sbjct: 58  VQLFIIF---YGLPTLN--------IEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKG 106

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 107 QWEAAYTIGMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQE 166

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I     + + +      IY  +  ++++    L  +
Sbjct: 167 IAAMNYEFLIVYFEAGLIYWVICFLLSIVQQILEKR 202



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 8   VFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 67

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 68  PTLNIEVEPYTAAVIGFSLN 87


>gi|226323073|ref|ZP_03798591.1| hypothetical protein COPCOM_00845 [Coprococcus comes ATCC 27758]
 gi|225208640|gb|EEG90994.1| hypothetical protein COPCOM_00845 [Coprococcus comes ATCC 27758]
          Length = 229

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 111/227 (48%), Gaps = 16/227 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---T 226
           F+ +    +    +     +   + ++G+VL      + R  ++KTGK   L  I     
Sbjct: 12  FIKDDRWHYIADGLKVTLIVTFCAVLIGVVLGFLL-AIVRSTYDKTGKLKLLNLICQIYI 70

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V + + Y + F             S    + +   +A    ++A++AEI R
Sbjct: 71  TVIRGTPVVVQLLIIYFVIF------------ASVDVSKTIVAILAFGMNSSAYVAEIFR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++AV  GQ EA  +LG  +R+    +++PQA ++++P L ++++ LLK +S+A  +  
Sbjct: 119 SGIMAVDNGQFEAGRSLGFNYRQTMIYIIMPQAFKNVLPALGNEFIVLLKETSVAGYIAL 178

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            DL   G  I ++T  A+  ++    IYL + ++ +  ++ L  ++ 
Sbjct: 179 QDLTKGGDIIRSRTYDALMPLMAVAIIYLVMVMIFSKLVSMLERRLR 225



 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRVYVEVFRNIP 140
              I  G   T  + F  ++   ++G L+   R         KL+  IC++Y+ V R  P
Sbjct: 18  WHYIADGLKVTLIVTFCAVLIGVVLGFLLAIVRSTYDKTGKLKLLNLICQIYITVIRGTP 77

Query: 141 PLVVIFFLYKSVL 153
            +V +  +Y  + 
Sbjct: 78  VVVQLLIIYFVIF 90


>gi|125624757|ref|YP_001033240.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|124493565|emb|CAL98550.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|300071557|gb|ADJ60957.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris NZ9000]
          Length = 228

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +    M     I  F  ++G +L +  T L++       + L  +YI  F   G 
Sbjct: 7   PKYLPYFNDGMIVTIFISAFVVLIGTLLGIV-TALAKISKIAPLRWLANIYIEIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I L + L      L  F            +   I +S  + A++AEIVR+G+ AV
Sbjct: 64  PMLVQIMLGFGL-MGSISLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA +LG+  R+A   V+LPQA+R+I+P + ++++ ++K+SSL   +G  ++ + 
Sbjct: 123 PLGQKEAAYSLGIRPRQAMTTVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVFNG 182

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+ N T Q I  ++     Y  ++ +++  +     K+     K
Sbjct: 183 AQTVANLTYQTISPMIFVALYYFVVTFVVSRLLVLFEKKLGKGYAK 228



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 48/123 (39%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y      G + T +++   ++  T++G +    ++S    + W+  +Y+E+FR 
Sbjct: 3   FDFLPKYLPYFNDGMIVTIFISAFVVLIGTLLGIVTALAKISKIAPLRWLANIYIEIFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P LV I   +  + S+        +L   +     G+   +L         V + +  +
Sbjct: 63  TPMLVQIMLGFGLMGSISLPTFQVGILQQDLGRLIPGIIVISLNSGAYMAEIVRAGIEAV 122

Query: 199 VLS 201
            L 
Sbjct: 123 PLG 125


>gi|322418598|ref|YP_004197821.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320124985|gb|ADW12545.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 234

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 121/222 (54%), Gaps = 9/222 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +S   +T++ +A   V +F+LG+++++      +  H +  + +   Y+  F   
Sbjct: 16  YFEWLVSGVKITLELSAVGIVGAFILGLLIAVL-----KMSHFRPLRWIASAYLEFF--R 68

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P L+ I   Y   +   +L        ++ + EF +  IAL+ YT+AFIAE +RSG++
Sbjct: 69  NTPLLIQIFFWYFGSYK--ILPTVVNDWLNSTNFEFAAAAIALTIYTSAFIAEDIRSGIL 126

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+ QMEAA + G ++ ++ + ++LPQA+R  +PPL +Q+LNL KNSSLA+ +G  +L 
Sbjct: 127 SIPKEQMEAARSAGFSYLRSMQYIILPQAVRITVPPLVNQFLNLTKNSSLAMTIGVMELT 186

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                + + + +  E       +YL LS+ I   ++  + K+
Sbjct: 187 YQARQVESYSFKGFEAFTAATVVYLVLSVSITALIDLYDKKV 228



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 40/82 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ G   T  L+  G++ A I+G L+   ++S  + + WI   Y+E FRN P 
Sbjct: 13  SGKYFEWLVSGVKITLELSAVGIVGAFILGLLIAVLKMSHFRPLRWIASAYLEFFRNTPL 72

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           L+ IFF Y     +LP   +  
Sbjct: 73  LIQIFFWYFGSYKILPTVVNDW 94


>gi|160941548|ref|ZP_02088880.1| hypothetical protein CLOBOL_06446 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435513|gb|EDP13280.1| hypothetical protein CLOBOL_06446 [Clostridium bolteae ATCC
           BAA-613]
          Length = 234

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 101/218 (46%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + SF LG  L++F   + R         +  LY+  ++I G P 
Sbjct: 13  FWPILKAGISFTIPLTLISFALGTTLAVFV-AIIRISKVPVLNKICELYV--WIIRGTPL 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +           F       V     S  +  +    A+ +EI+R+ ++++P+
Sbjct: 70  LVQLFLVF-----------FGLPKVGVVINPMPSGILVFTLSIGAYSSEIIRAAILSIPK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++LG+++ +    ++LPQA +  +PPL + ++ L+K++SLA  +   ++     
Sbjct: 119 GQWEAAMSLGMSYPQQLLRIILPQAFKISVPPLFNSFIALVKDTSLAANITIPEMFLTTQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I  +  + + + +   FIYL    ++    NR+  K+
Sbjct: 179 RITARNYEPLLMYIEVGFIYLIFCTVLNYVQNRIENKL 216



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 33/83 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   +  G   T  L        T +   V   R+S   ++  IC +YV + R  P 
Sbjct: 10  TSSFWPILKAGISFTIPLTLISFALGTTLAVFVAIIRISKVPVLNKICELYVWIIRGTPL 69

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV 164
           LV +F ++  +  V  + +    
Sbjct: 70  LVQLFLVFFGLPKVGVVINPMPS 92


>gi|170780723|ref|YP_001709055.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169155291|emb|CAQ00394.1| putative integral membrane transport protein [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 221

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 16/230 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               + +   L+  T+       +  F+  L I L L   RL   +  +    +   YIS
Sbjct: 5   WDLFWSSFGPLALETIRGTIPLALVTFALGLAIALGLALMRL---YGNRLVSGIARFYIS 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             ++ G P LV + + +                   V P + S  IALS     + AEI+
Sbjct: 62  --VVRGTPLLVQLFVIFY-----------GLPSIGVVLPPWPSAVIALSLNVGGYAAEII 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+ +++VPRGQ EA   +G++     R +++PQA R  +PPL++ +++L+K++SLA  + 
Sbjct: 109 RASILSVPRGQWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKDTSLASVIL 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +L      I + T + + + L    IY  + ++++    RL  ++   
Sbjct: 169 VTELFKQAQLIASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRY 218



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SS+    L     T  LA         I   +   RL  N+LV+ I R Y+ V R  P L
Sbjct: 10  SSFGPLALETIRGTIPLALVTFALGLAIALGLALMRLYGNRLVSGIARFYISVVRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S+  +          + LN
Sbjct: 70  VQLFVIFYGLPSIGVVLPPWPSAVIALSLN 99


>gi|326803632|ref|YP_004321450.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651009|gb|AEA01192.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 497

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 19/199 (9%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG ++++      R F  K  + L   Y+  F++ G P ++ + + +   F  P L    
Sbjct: 318 LGFLIAIM-----RVFSPKLIQWLIEGYV--FIMRGSPLMLQLMMVF---FGLPYL---- 363

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                     F +  IA     AA+ AEI R G+ +VP+GQ E+   LG+  ++  R ++
Sbjct: 364 ----GINLDRFTAALIAFVVNYAAYFAEIFRGGITSVPQGQYESIKVLGIGWQRGFRRII 419

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ M+  +P + ++ + L+K++SL   +G  +L+  G  I   T   I   L+    YL
Sbjct: 420 LPQVMKITLPSVGNEVIALVKDTSLVYVIGLGELLRAGS-IAANTYATIIPYLVCGVFYL 478

Query: 376 SLSIMIALFMNRLNAKIAL 394
             +  + L + R+  +++ 
Sbjct: 479 IFTAFVTLALRRIEYRVSW 497



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  GF  T  L    +  +  +G L+   R+ + KL+ W+   YV + R  P ++ +  +
Sbjct: 297 LWSGFKLTLVLFVLVLALSLPLGFLIAIMRVFSPKLIQWLIEGYVFIMRGSPLMLQLMMV 356

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  +  +    D          +N 
Sbjct: 357 FFGLPYLGINLDRFTAALIAFVVNY 381


>gi|156977165|ref|YP_001448071.1| ABC transporter ATP-binding/permease protein [Vibrio harveyi ATCC
           BAA-1116]
 gi|156528759|gb|ABU73844.1| hypothetical protein VIBHAR_05951 [Vibrio harveyi ATCC BAA-1116]
          Length = 265

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 19/277 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             ++  + ++ V +   +  L               +PD+      G +     +    +
Sbjct: 7   KPVLQALLQIAVLLIAIVWVLDSGAQAMGYQWQWERVPDYIAFYEEGEWWPAELIEGLIV 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A    F+ V+G+V +L      R  + K G A+   Y+   LI   P LV I L 
Sbjct: 67  TLKISAISLFFTLVIGLVTALL-----RLSNSKVGNAIGTTYVE--LIRNTPLLVQIYLL 119

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +ALS +  A+ AEI R+GL ++P+GQ EA  
Sbjct: 120 YFVF------------GPVIGLDRFSTAVLALSLFQGAYTAEIFRAGLNSIPKGQFEATK 167

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+   A + V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T 
Sbjct: 168 SLGLSPLFAYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEARNIVSETA 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              EI      IYL+L++ ++     L  K+    +K
Sbjct: 228 MPFEIWFTVAAIYLALTLSLSGLSAWLEHKLGASWRK 264



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 12/131 (9%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R+    +Q +L + + +I +  V      ++    ++G  +  ER         + +  +
Sbjct: 4   RILKPVLQALLQIAVLLIAIVWV------LDSGAQAMGYQWQWER-----VPDYIAFYEE 52

Query: 83  SSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  A ++ G + T  ++   +    +IG +    RLS +K+   I   YVE+ RN P 
Sbjct: 53  GEWWPAELIEGLIVTLKISAISLFFTLVIGLVTALLRLSNSKVGNAIGTTYVELIRNTPL 112

Query: 142 LVVIFFLYKSV 152
           LV I+ LY   
Sbjct: 113 LVQIYLLYFVF 123


>gi|117164567|emb|CAJ88113.1| putative ABC transporter permease protein [Streptomyces ambofaciens
           ATCC 23877]
          Length = 343

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 14/248 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +     L+   +    +T+   A   V  F+LG VL+       R       +
Sbjct: 62  NPVWEWGVFRDYVLSETIVQAVWVTLQLTAYATVLGFLLGTVLAFM-----RLSRSPVLQ 116

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKPVLGQFNFIGGSTVSPEFMSLY 270
            +   YI  F    +P +V +   + L           P    F  +  +++     +  
Sbjct: 117 TVAWTYIWIF--RSIPMIVQLVFWFNLSALYQELGIGVPFGPVFWSVDSNSLIGTIGAAI 174

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ + AA+ AEIVR G+I+V  GQ+EAA ALG+   +  R ++LPQAMR+I+P   ++
Sbjct: 175 IGLTLHQAAYAAEIVRGGVISVDHGQLEAAAALGIPRLRQIRRIVLPQAMRAILPTAGNE 234

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK +S+   +   +L      I  + G+ I ++L+    Y+ L+ ++++    +  
Sbjct: 235 IIGLLKGTSVVYVMSIGELFYQVQVIYGRNGRVIPLLLVATAWYVVLTSLLSVAQYYVER 294

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 295 RYARGADR 302



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 4/154 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    +   A+ V    T  L     +   ++GT++   RLS + ++  +   Y+ +FR
Sbjct: 72  DYVLSETIVQAVWV----TLQLTAYATVLGFLLGTVLAFMRLSRSPVLQTVAWTYIWIFR 127

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           +IP +V + F +        +       P    +++  L            +   ++   
Sbjct: 128 SIPMIVQLVFWFNLSALYQELGIGVPFGPVFWSVDSNSLIGTIGAAIIGLTLHQAAYAAE 187

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           IV     +             +P L     ++  
Sbjct: 188 IVRGGVISVDHGQLEAAAALGIPRLRQIRRIVLP 221


>gi|294788441|ref|ZP_06753684.1| L-cystine ABC transporter, permease protein [Simonsiella muelleri
           ATCC 29453]
 gi|294483872|gb|EFG31556.1| L-cystine ABC transporter, permease protein [Simonsiella muelleri
           ATCC 29453]
          Length = 238

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +  LS LP    +              +   +++      FV   ++ I ++L     
Sbjct: 1   MLQQFLSSLPFMTDARAQLVMDSFLPMVQAGFMVSLPLAMISFVCGILIAIGVALVRISP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           S +        L L      +I G P LV +++ +   +  P L                
Sbjct: 61  SDNILHHIL--LKLTKYYVGIIRGTPLLVQLSIVF---YGLPAL--------GIYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S  T A+ +E +RS +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL
Sbjct: 108 AAIIGFSLNTGAYASETIRSAILSVPKGQWEAGFSIGMTYMQTFRRIIAPQAFRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L KN+SLA  V   +L  V     N +   + + +    +Y    +++ L   R
Sbjct: 168 SNDFIGLFKNTSLASVVTVTELFRVAQQYANLSYDFLPVYIEAGVVYWCFCMVLFLIQAR 227

Query: 388 LNAKIAL 394
           +  + + 
Sbjct: 228 IEKRFSR 234


>gi|283797387|ref|ZP_06346540.1| glutamine ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291075063|gb|EFE12427.1| glutamine ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|295090529|emb|CBK76636.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
 gi|295115439|emb|CBL36286.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SM4/1]
          Length = 230

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 16/230 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---T 226
           F+N     +    + T  +I  F+ VL  ++  F   + R  ++KT +   L +I     
Sbjct: 13  FINGDNWHYIADGLVTTIQITFFA-VLVGIVIGFIVGIIRSTYDKTHRLKILNFICNVYL 71

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P LV + + Y + F             S    + +   +A    + A++AEI R
Sbjct: 72  TVIRGTPVLVQLLIIYYVIF------------ASVRIDKVLVAVLAFGINSGAYVAEIFR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++++  GQ EA  +LG  + +    +++PQA ++++P L ++++ LLK +S+A  +G 
Sbjct: 120 SGIMSIDNGQFEAGRSLGFNYPQTMWYIIMPQAFKNVLPALCNEFIALLKETSIAGYIGL 179

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            DL   G  I ++T  A   ++    IYL++ ++    +  L  ++   E
Sbjct: 180 QDLTKGGDIIRSRTYSAFMPLIAVALIYLAIVLIFTQLIKILERRLRQSE 229


>gi|319761573|ref|YP_004125510.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330823441|ref|YP_004386744.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317116134|gb|ADU98622.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329308813|gb|AEB83228.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 218

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+FV +  L + L L    L+R    K        YI  +L+ G P ++ +   Y  
Sbjct: 18  VTLKLFVITLALAVPLGLVL-ALARLSRWKALSGAVNGYI--WLMRGTPLMLQMLFIYFA 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +   A +   AA+ AEI R+G+ +V RGQ EAA  LG
Sbjct: 75  LPFVPVV--------GVRLPDFPAAVTAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++ +  R ++LPQ +RSI+PP++++ + L+K++SL   +   DL+     I+ +     
Sbjct: 127 MSYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDF-TT 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              ++    YL +++++     RL  + A  ++
Sbjct: 186 TPFIVAAAFYLLMTLVLTWGFQRLEQRYAKYDQ 218



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    +  A  +G ++   RLS  K ++     Y+ + R  P ++ + F+
Sbjct: 12  LAQGATVTLKLFVITLALAVPLGLVLALARLSRWKALSGAVNGYIWLMRGTPLMLQMLFI 71

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  +       P
Sbjct: 72  YFALPFVPVVGVRLPDFP 89


>gi|15612734|ref|NP_241037.1| amino acid ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10172783|dbj|BAB03890.1| amino acid ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 233

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + + SF +G+ +++  T L+R       K +  +Y+S  +I G P L
Sbjct: 25  LPLLKGALYYTIPLTLISFTIGLFIAVL-TALARISGVAPLKMVARVYVS--IIRGTPLL 81

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +                       F +  I  S    A+ +EI+R+ ++++P+G
Sbjct: 82  VQLFIIFY-----------GLPSIGVTIDPFPAAVIGFSLNVGAYASEIIRAAILSIPKG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ++G+++ +A + ++LPQA R  IPPL++ +++L+K++SLA  +  A++      
Sbjct: 131 QWEAAYSIGMSYPQALKRIVLPQASRVSIPPLSNSFISLVKDTSLASLILVAEMFRRAQE 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I     + + +      IY  +   ++L   R+  ++   
Sbjct: 191 IAATNYEFLLLYAQAGAIYWIICFGLSLVQGRIENRLDRY 230



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L          I  L    R+S    +  + RVYV + R  P LV +F ++  +
Sbjct: 32  LYYTIPLTLISFTIGLFIAVLTALARISGVAPLKMVARVYVSIIRGTPLLVQLFIIFYGL 91

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            S+    D       G  LN
Sbjct: 92  PSIGVTIDPFPAAVIGFSLN 111


>gi|312883097|ref|ZP_07742828.1| ABC transporter ATP-binding/permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309369257|gb|EFP96778.1| ABC transporter ATP-binding/permease protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 264

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD       G +     +   T+T+  +    +F+ ++G+V +L      
Sbjct: 33  MGYQWQWERVPDFIAFYEDGQWWPAELIDGLTVTIKISMISLLFTLLIGMVTALL----- 87

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    + G+ + LLY+   LI   P LV I L Y +             G       F +
Sbjct: 88  RLSSSRVGRGIALLYVE--LIRNTPLLVQIYLLYFVF------------GPIIGLDRFTT 133

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R+GL ++P+GQ EAA +LGL        V+LPQ ++  +PPL 
Sbjct: 134 AIVALALFQGAYTAEVFRAGLNSIPKGQYEAAKSLGLNRFFTFYDVILPQVIQRTLPPLA 193

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL +    I+++T    EI      IYL L++ ++   + L
Sbjct: 194 NEVVSLVKNSSIVSVMAIFDLTTEARNIVSETAMPFEIWFTVAAIYLGLTLTLSAVSSIL 253

Query: 389 NAKIALKEK 397
             K+    +
Sbjct: 254 ETKLGSHWR 262



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 76  IVPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            + +  D  +  A ++ G   T  ++   ++   +IG +    RLS++++   I  +YVE
Sbjct: 45  FIAFYEDGQWWPAELIDGLTVTIKISMISLLFTLLIGMVTALLRLSSSRVGRGIALLYVE 104

Query: 135 VFRNIPPLVVIFFLYKSV 152
           + RN P LV I+ LY   
Sbjct: 105 LIRNTPLLVQIYLLYFVF 122


>gi|154508733|ref|ZP_02044375.1| hypothetical protein ACTODO_01241 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798367|gb|EDN80787.1| hypothetical protein ACTODO_01241 [Actinomyces odontolyticus ATCC
           17982]
          Length = 320

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 12/246 (4%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              + +             +     + + + V+G  L++    + R       + + + Y
Sbjct: 44  NFQWQVVSQWLFSRSILQGVLFTIILTILAMVVGTALAI-TMAIMRQSVNPVLRWVAMAY 102

Query: 224 ISTFLIFGLPTLVLIA---------LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           I  F    + T ++           L + + F   + G       +T    F   +I L 
Sbjct: 103 IWFFRGTPIYTQLIFWSLLPTLYPKLSFGVPFLGSLWGWELTFDTATYFTPFWMAFIGLG 162

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A++AEI+R+GL++VP+GQ EAA ALG+      R ++LPQAMR I+PP+ ++ +++
Sbjct: 163 LNEGAYLAEIMRAGLLSVPKGQWEAATALGMPRGTIFRRIILPQAMRVIVPPIGNETISM 222

Query: 335 LKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LK +SL  A+ F  +L  +       T   + +++     YL ++ ++    + +     
Sbjct: 223 LKTTSLVSAIPFTLELTFIARQRGQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEKYYG 282

Query: 394 LK-EKK 398
              E++
Sbjct: 283 KGFERR 288



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 48/138 (34%), Gaps = 3/138 (2%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S   ++ +IL G + T  L    M+  T +   +   R S N ++ W+   Y+  FR  P
Sbjct: 51  SQWLFSRSILQGVLFTIILTILAMVVGTALAITMAIMRQSVNPVLRWVAMAYIWFFRGTP 110

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
               + F     L     P  S  +PF   L    L+F T T  T   +      L    
Sbjct: 111 IYTQLIFW---SLLPTLYPKLSFGVPFLGSLWGWELTFDTATYFTPFWMAFIGLGLNEGA 167

Query: 201 SLFATRLSRHFHEKTGKA 218
            L     +       G+ 
Sbjct: 168 YLAEIMRAGLLSVPKGQW 185


>gi|330873993|gb|EGH08142.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 222

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 13/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +  +Y+S F   G P LV + + Y   +  P L       G  + P 
Sbjct: 42  ALMRLSRFKLVNWIARIYVSFF--RGTPLLVQLFVIY---YGLPEL-------GIQLEP- 88

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + +V RGQ EAA ++G+T  +  R  +LPQA R+ +P
Sbjct: 89  LSAALIGFSLNMAAYACEILRAAIGSVERGQWEAAASIGMTRWQTMRRAILPQAARTALP 148

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+  ++   
Sbjct: 149 SLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWILATALSHLQ 208

Query: 386 NRLNAKIALKE 396
           N+L A++   +
Sbjct: 209 NKLEARVNRHD 219



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  KLV WI R+YV  FR  P LV +F +
Sbjct: 16  LLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRFKLVNWIARIYVSFFRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +       G  LN 
Sbjct: 76  YYGLPELGIQLEPLSAALIGFSLNM 100


>gi|90577484|ref|ZP_01233295.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90440570|gb|EAS65750.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 272

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 19/272 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             +++ + ++ V V   +  L               +P +      G + +   +    +
Sbjct: 16  KPVISGLLQITVIVLAIVWLLNSGADAMNYNWQWYRVPQYLFFKEDGEWFSAELIDGLLI 75

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A   +F+ + G+V +L      R  H   G+AL   YI   +I   P LV I L 
Sbjct: 76  TIKISAISLIFTIIFGLVTALL-----RLSHSIVGRALARGYIE--VIRNTPLLVQIYLL 128

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +ALS +  A+ AEI RSGL+ +P+GQ EAA 
Sbjct: 129 YFVF------------GPVLGLERFTTAVLALSLFQGAYTAEIFRSGLMNIPKGQFEAAE 176

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+   + R ++LPQ +R I+P LT++ ++L+KNSS+   +   DL + G  I+  T 
Sbjct: 177 SLGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVADTA 236

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              EI      +YL ++++++ F   L  K+A
Sbjct: 237 MPFEIWFTIAAMYLCITLLLSAFATLLEHKLA 268



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 79  YTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +  D  + +A ++ G + T  ++   +I   I G +    RLS + +   + R Y+EV R
Sbjct: 58  FKEDGEWFSAELIDGLLITIKISAISLIFTIIFGLVTALLRLSHSIVGRALARGYIEVIR 117

Query: 138 NIPPLVVIFFLYKSV 152
           N P LV I+ LY   
Sbjct: 118 NTPLLVQIYLLYFVF 132


>gi|330503969|ref|YP_004380838.1| amino acid ABC transporter ATP-binding protein [Pseudomonas
           mendocina NK-01]
 gi|328918255|gb|AEB59086.1| amino acid ABC transporter ATP-binding protein [Pseudomonas
           mendocina NK-01]
          Length = 504

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 14/240 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   F +F      +     +  ++  ++   VLG  L+      SR         
Sbjct: 1   MPFEWSYFFSLFSMPSFWAACWTVVKLSSLAWLLGLVLGFGLASAKQAASRWLSVPAA-- 58

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                I  +    +P LVL+   Y L    P         G  +S  F +   AL    A
Sbjct: 59  -----IYVWFFRSVPLLVLLIFVYNLPQLMPA-------SGKVLSNPFYAGLFALVLTEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R GL++V +GQ EAA ALG+    A RL+++PQA R  +P LT++Y+ ++K +
Sbjct: 107 AYMAEIHRGGLLSVAKGQREAARALGIGRLGAQRLIVVPQAFRIALPTLTNEYVTIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL   +  ++L+ VG  +  Q    +E +      Y+ +  +    +  L   + L  +K
Sbjct: 167 SLVSVISLSELLLVGQRLYAQNFLVLETLGAVAVYYVLIVSLFGWGLQHLERHLDLARRK 226



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 5/194 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                     L+    +   ++G  + + + +A++ ++    +YV  FR++P LV++ F+
Sbjct: 17  FWAACWTVVKLSSLAWLLGLVLGFGLASAKQAASRWLSVPAAIYVWFFRSVPLLVLLIFV 76

Query: 149 YKS-VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           Y    L        S     G+F      +     +     + V         +L   RL
Sbjct: 77  YNLPQLMPASGKVLSNPFYAGLFALVLTEAAYMAEIHRGGLLSVAKGQREAARALGIGRL 136

Query: 208 SRHFHEKTGK----ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                    +    ALP L      I  L +LV +    +L      L   NF+   T+ 
Sbjct: 137 GAQRLIVVPQAFRIALPTLTNEYVTIVKLTSLVSVISLSELLLVGQRLYAQNFLVLETLG 196

Query: 264 PEFMSLYIALSCYT 277
              +   + +S + 
Sbjct: 197 AVAVYYVLIVSLFG 210


>gi|319638304|ref|ZP_07993067.1| amino acid permease integral membrane protein [Neisseria mucosa
           C102]
 gi|317400577|gb|EFV81235.1| amino acid permease integral membrane protein [Neisseria mucosa
           C102]
          Length = 238

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 13/248 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +  + L+ LP    +              +   +++      FV   ++ + ++L     
Sbjct: 1   MLNNFLASLPFMTETRADMLISAFWPMVKAGFAVSLPLAIASFVIGMIIAVAVALVRIMP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           S    +K    L   YIS  +I G P LV + + +                 S       
Sbjct: 61  SGGIFQKCLLKLVEFYIS--IIRGTPLLVQLVIVFY-----------GLPSVSIYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL
Sbjct: 108 AAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIIAPQAFRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +++++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   R
Sbjct: 168 SNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQAR 227

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 228 LEKRFDRY 235


>gi|323339948|ref|ZP_08080215.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
 gi|323092590|gb|EFZ35195.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
          Length = 482

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + + + GI++       ++     +G  +       ++  GLP +VL    Y  
Sbjct: 290 LTVISIICATLFGILIGFLGVVPNKIAQGVSGTVI-------YIFRGLPLIVLALFIYN- 341

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L         +  P F++  I L     A+IA  V+ G+ AV  GQMEAA +LG
Sbjct: 342 --GIPSLTG-------SKIPAFVAGVITLMLNEGAYIAAFVKGGIEAVDSGQMEAARSLG 392

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L   G  II +  +  
Sbjct: 393 LPFGKAMRKVVLPQGIKIMIPSFINQFIITLKDTSILSVIGLLELTQTGKIIIARNLEGF 452

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  I   IYL L  ++ L    +  +I 
Sbjct: 453 RVWTIVAVIYLVLITVLTLLSKWVERRIK 481



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ G   T  L    +I AT+ G L+G   +  NK+   +    + +FR +P +V+ 
Sbjct: 277 GGVIVSGLFETIKLTVISIICATLFGILIGFLGVVPNKIAQGVSGTVIYIFRGLPLIVLA 336

Query: 146 FFLYKSVLSV 155
            F+Y  + S+
Sbjct: 337 LFIYNGIPSL 346


>gi|170718972|ref|YP_001783435.1| polar amino acid ABC transporter inner membrane subunit
           [Haemophilus somnus 2336]
 gi|168827101|gb|ACA32472.1| polar amino acid ABC transporter, inner membrane subunit
           [Haemophilus somnus 2336]
          Length = 243

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+   V+ I ++L     S     +    +  +YIS  +I G P LV I++ + 
Sbjct: 42  PLAIVSFILGMVIAIAVALIRVSPSHSIIHRLFLFITKIYIS--IIRGTPMLVQISIVF- 98

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P LG F             +  I  S    A+ +E VR+ + +VP+GQ EA   +
Sbjct: 99  --YGLPALGIF--------IDPIPAAIIGFSLNVGAYASETVRAAIQSVPKGQWEAGYTI 148

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R +++PQA R  +PPL++ +++L K++SLA  V   ++  V   + N +   
Sbjct: 149 GMTYMQTFRRIIVPQAFRVAVPPLSNTFISLFKDTSLASVVTVTEMFRVAQQVANMSYDF 208

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + + +    IY     ++ L+  R+  K+A    +
Sbjct: 209 LPVYIEAALIYWCFCFILFLWQARIEKKLARYVTR 243


>gi|116512666|ref|YP_811573.1| glutamate ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris SK11]
 gi|116108320|gb|ABJ73460.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 228

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +    M     I  F  ++G +L +  T L++       + L  +YI  F   G 
Sbjct: 7   PKYLPYFNDGMIVTIFISAFVVLIGTLLGIV-TALAKISKIDPLRWLANIYIEIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I L + L      L  F            +   I +S  + A++AEIVR+G+ AV
Sbjct: 64  PMLVQIMLGFGL-MGSISLPTFQVGILQQDLGRLIPGIILISLNSGAYMAEIVRAGIEAV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA +LG+  R+A   V+LPQA+R+I+P + ++++ ++K+SSL   +G  ++ + 
Sbjct: 123 PLGQKEAAYSLGIRPRQAMTTVILPQALRNILPAVGNEFVTIIKDSSLLYTIGVMEVFNG 182

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+ N T Q I  ++     Y  ++ +++  +     ++     K
Sbjct: 183 AQTVANLTYQTISPMIFVALYYFVVTFVVSRLLVLFEKRLGKGYAK 228



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 48/123 (39%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y      G + T +++   ++  T++G +    ++S    + W+  +Y+E+FR 
Sbjct: 3   FDFLPKYLPYFNDGMIVTIFISAFVVLIGTLLGIVTALAKISKIDPLRWLANIYIEIFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P LV I   +  + S+        +L   +     G+   +L         V + +  +
Sbjct: 63  TPMLVQIMLGFGLMGSISLPTFQVGILQQDLGRLIPGIILISLNSGAYMAEIVRAGIEAV 122

Query: 199 VLS 201
            L 
Sbjct: 123 PLG 125


>gi|312864788|ref|ZP_07725019.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus downei F0415]
 gi|311099915|gb|EFQ58128.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus downei F0415]
          Length = 230

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 112/233 (48%), Gaps = 4/233 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      +   +    +     I V    LG +L +    L++  + K    L   Y+
Sbjct: 1   MNFDFSFLPKYWGYFNYGVLVTVMISVCVVFLGTILGVLV-ALAKRSNIKLLNYLVSFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P +V I + + L  +        F          +   I LS  + A+I+EI
Sbjct: 60  WVF--RGTPMVVQIMIAF-LWMNFKSAPTIGFGTVELDFSRLIPGIIILSLNSGAYISEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ AVP+GQ+EAA +LG+   KA R V+LPQA ++I+P L ++++ ++K+SSL   +
Sbjct: 117 VRAGIEAVPKGQVEAAYSLGIKPAKAMRYVVLPQAFKNILPALGNEFITIIKDSSLLQTI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +L +   T++  T   +E +L   F YL L+ ++      L  ++   +K
Sbjct: 177 GIMELWNGAQTVLATTYVPLEPLLFAAFYYLMLTTVLTAGQKWLENRLGKGQK 229



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 33/75 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    Y      G + T  ++   +   TI+G LV   + S  KL+ ++   YV VFR
Sbjct: 4   DFSFLPKYWGYFNYGVLVTVMISVCVVFLGTILGVLVALAKRSNIKLLNYLVSFYVWVFR 63

Query: 138 NIPPLVVIFFLYKSV 152
             P +V I   +  +
Sbjct: 64  GTPMVVQIMIAFLWM 78


>gi|257868053|ref|ZP_05647706.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257874383|ref|ZP_05654036.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257802136|gb|EEV31039.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257808547|gb|EEV37369.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 493

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 18/230 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        ++    T+       +F  + G +L+       +    K  K +  +YI  
Sbjct: 282 FWEKYLPFYITGTGYTIFLALVGVLFGSIGGSLLAFM-----KLSKSKALKVIAAVYIE- 335

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV I + Y           F          +  +  IAL+  +AA++AEI+R
Sbjct: 336 -YVRGTPLLVQIFIVY-----------FGTGVLGLELSKLAAGCIALALNSAAYVAEIIR 383

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+   +G 
Sbjct: 384 AGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNEFVTVIKESSVVSVIGV 443

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++L+   G +   + +     +I   IY  L+  ++  +     ++   +
Sbjct: 444 SELIFQTGVVQGASFKPFLPYVIVSLIYFVLTFALSRLLGVAERRMKTSD 493



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T +LA  G++  +I G+L+   +LS +K +  I  VY+E  R  P LV 
Sbjct: 286 YLPFYITGTGYTIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQ 345

Query: 145 IFFLYKSV 152
           IF +Y   
Sbjct: 346 IFIVYFGT 353


>gi|229074557|ref|ZP_04207586.1| Amino acid ABC transporter [Bacillus cereus Rock4-18]
 gi|229095491|ref|ZP_04226482.1| Amino acid ABC transporter [Bacillus cereus Rock3-29]
 gi|229101615|ref|ZP_04232338.1| Amino acid ABC transporter [Bacillus cereus Rock3-28]
 gi|229114443|ref|ZP_04243861.1| Amino acid ABC transporter [Bacillus cereus Rock1-3]
 gi|229159927|ref|ZP_04287934.1| Amino acid ABC transporter [Bacillus cereus R309803]
 gi|228623666|gb|EEK80485.1| Amino acid ABC transporter [Bacillus cereus R309803]
 gi|228669122|gb|EEL24546.1| Amino acid ABC transporter [Bacillus cereus Rock1-3]
 gi|228681857|gb|EEL36011.1| Amino acid ABC transporter [Bacillus cereus Rock3-28]
 gi|228688037|gb|EEL41924.1| Amino acid ABC transporter [Bacillus cereus Rock3-29]
 gi|228708677|gb|EEL60821.1| Amino acid ABC transporter [Bacillus cereus Rock4-18]
          Length = 207

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 7   FTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 62

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 63  --YGLPTLN--------IEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 112

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 113 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 172

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY  +  ++++    L  +
Sbjct: 173 LIVYFEAGLIYWVICFLLSIVQQMLEKR 200



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 6   VFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 65

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 66  PTLNIEVEPYTAAVIGFSLN 85


>gi|241894752|ref|ZP_04782048.1| glutamate superfamily ATP binding cassette transporter, membrane
           protein [Weissella paramesenteroides ATCC 33313]
 gi|241871964|gb|EER75715.1| glutamate superfamily ATP binding cassette transporter, membrane
           protein [Weissella paramesenteroides ATCC 33313]
          Length = 483

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/283 (22%), Positives = 115/283 (40%), Gaps = 16/283 (5%)

Query: 114 VGAGRLSANKLVAWICRVYVEVFR-NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            G  + +  +L+      Y E+ +      +V  +L K   +      +          +
Sbjct: 214 FGVKKSANAELLKKFNAGYAEIVKDGTYDKIVNRYLGKGGYNYKKNAANQTENQKTTIWD 273

Query: 173 NRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
               +   L+       ++ +   +L  +  +F   L      K  + L    I  F   
Sbjct: 274 LVKENKSALSSGLVKTLELTLVGIILAAIWGIFLGILG-VMPSKLARGLSTTIIYIF--R 330

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP LV   L + ++   P L            P F +  I L     A+I   V  G  
Sbjct: 331 GLPMLV---LAFFIYIGIPNLTG-------QKIPAFTAGVITLILNEGAYIGAFVSGGFK 380

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQ+EAA +LGL + KA R V++PQ +R +IP   +Q++  LK++S+  A+G  +L 
Sbjct: 381 SVDSGQLEAARSLGLPYGKAMRKVVMPQGIRLMIPSFINQFIITLKDTSILSAIGIIELT 440

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  II +  Q   + L+   +YL +  ++    N +  +I 
Sbjct: 441 QTGTLIIARNLQGFRVWLMIAVLYLIVITLLTWLSNWVEKRIK 483



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 35/71 (49%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G V T  L   G+I A I G  +G   +  +KL   +    + +FR +P LV+ FF
Sbjct: 281 ALSSGLVKTLELTLVGIILAAIWGIFLGILGVMPSKLARGLSTTIIYIFRGLPMLVLAFF 340

Query: 148 LYKSVLSVLPI 158
           +Y  + ++   
Sbjct: 341 IYIGIPNLTGQ 351


>gi|317047287|ref|YP_004114935.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948904|gb|ADU68379.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 319

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 15/270 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +VV+      +  V   P+    +    F     L    +T+       +   +L
Sbjct: 32  RWVSWIVVLVIASNFLWLVATNPNFEWSVVLKWFTEASVLKGLQVTLGLTVVSMILGTLL 91

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+++     R    K    L  LYI  F   G P LV +   Y L    P L     
Sbjct: 92  GLLLAVW-----RLSENKLLSGLSSLYIWFF--RGTPLLVQLIFWYNLSTLFPTLSITIP 144

Query: 257 IGGSTV--------SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             G T              +    L+   AA++AEI+R+GL++V  GQ+E   A G++  
Sbjct: 145 WTGITFASWNTNDLITPLTAAIAGLALNEAAYMAEIIRAGLLSVDNGQVETTQAFGMSRT 204

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A R +++PQAMRSIIPP  +Q ++++K +SL   +   DL+     + N+T + I +++
Sbjct: 205 RALRRIIIPQAMRSIIPPTGNQLISMIKATSLVSVIAMGDLLYSVQAVYNRTFEIIPMLM 264

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +  YL ++ ++ +  + +    A   K+
Sbjct: 265 VAVIWYLIITSILNVGQSAIERYYARGTKR 294



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 32/67 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    MI  T++G L+   RLS NKL++ +  +Y+  FR  P LV + F Y
Sbjct: 71  LKGLQVTLGLTVVSMILGTLLGLLLAVWRLSENKLLSGLSSLYIWFFRGTPLLVQLIFWY 130

Query: 150 KSVLSVL 156
                  
Sbjct: 131 NLSTLFP 137


>gi|15896853|ref|NP_350202.1| amino acid ABC transporter permease [Clostridium acetobutylicum
           ATCC 824]
 gi|15026719|gb|AAK81542.1|AE007858_3 Amino acid ABC transporter, permease component [Clostridium
           acetobutylicum ATCC 824]
 gi|325511027|gb|ADZ22663.1| Amino acid ABC transporter, permease component [Clostridium
           acetobutylicum EA 2018]
          Length = 217

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/141 (27%), Positives = 80/141 (56%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            F+          +  + LS  + A+IAEI+R G++A+  GQ EA+ ALGLT+ +  + +
Sbjct: 77  PFLSDKLTMTPMKAAILGLSLNSGAYIAEIIRGGILAIDNGQFEASKALGLTYGQTMKRI 136

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R +IPP  ++++ ++K++SL   +   +L+     +++ +G A+   L     Y
Sbjct: 137 ILPQAIRVVIPPCGNEFIAMIKDTSLVSVITMEELLRKAQLLVSSSGDAVTPYLFAGIFY 196

Query: 375 LSLSIMIALFMNRLNAKIALK 395
           L L+ +     +++  K+++ 
Sbjct: 197 LILTTIFTGIFSKIEKKLSVY 217


>gi|217423525|ref|ZP_03455026.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
 gi|217393383|gb|EEC33404.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
          Length = 240

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 20/260 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +PPL +      ++    P+      L          L    LT+       +F  V  +
Sbjct: 1   MPPLALHARFMIALSRTPPLHMPITSLLAQSLP--VLLQGALLTVKFAVLSMLFGLVGAV 58

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L     SR         L   Y+S  ++ G P LV I + Y   +  P L       
Sbjct: 59  ALALMGIGRSR-----VLAGLARAYVS--VMRGTPLLVQIFVVY---YGLPSL------- 101

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++ P   +  IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+ PQ
Sbjct: 102 GVSLDPT-PAGVIALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQ 160

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L    +Y  L 
Sbjct: 161 ALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLC 220

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++         ++AL  + 
Sbjct: 221 QILEWVQRWYERRLALPSRH 240



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   +    +    +  ++++A + R YV V R  P LV IF 
Sbjct: 34  VLLQGALLTVKFAVLSMLFGLVGAVALALMGIGRSRVLAGLARAYVSVMRGTPLLVQIFV 93

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 94  VYYGLPSL 101


>gi|163800524|ref|ZP_02194425.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175967|gb|EDP60761.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 265

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 19/277 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             ++  + ++   +   +  L               +PD+      G + +   +S   +
Sbjct: 7   KPVLQALLQIIFLLIAIVLLLNSGAQTIGYQWQWERVPDYIAFYEDGEWWSAELISGLMV 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A   +F+  +G+V +L      R  H K G A+ + Y+   +I   P LV I L 
Sbjct: 67  TLKISAISLIFTLAIGLVTALL-----RLSHSKVGNAIGVTYVE--VIRNTPLLVQIYLL 119

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F S  +ALS +  A+ AEI R+GL ++ +GQ EAA 
Sbjct: 120 YFVF------------GPVIGLDRFSSAVLALSLFQGAYTAEIFRAGLSSIAKGQFEAAK 167

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+   A + V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T 
Sbjct: 168 SLGLSPFFAYKDVILPQVLQRTLPPLTNEVVSLIKNSSIVSVMAIFDLTTEARNIVSETA 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              EI      IYL+L++ ++     L  K+    +K
Sbjct: 228 MPFEIWFTVAAIYLALTLTLSGLSAWLEHKLGASWRK 264



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 12/131 (9%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           RV    +Q +L ++  +I +  + N          ++G  +  ER         + +  D
Sbjct: 4   RVLKPVLQALLQIIFLLIAIVLLLNSGA------QTIGYQWQWER-----VPDYIAFYED 52

Query: 83  SSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             + +A ++ G + T  ++   +I    IG +    RLS +K+   I   YVEV RN P 
Sbjct: 53  GEWWSAELISGLMVTLKISAISLIFTLAIGLVTALLRLSHSKVGNAIGVTYVEVIRNTPL 112

Query: 142 LVVIFFLYKSV 152
           LV I+ LY   
Sbjct: 113 LVQIYLLYFVF 123


>gi|170692241|ref|ZP_02883404.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170142671|gb|EDT10836.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 219

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 18/212 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F  + G VL+L         H +T   L  +Y+S  ++ G P LV I + Y    
Sbjct: 26  VLSMFFGLIAGAVLALMG-----VSHSRTLNRLARVYVS--VMRGTPLLVQIFVIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L  FN     T      +  IALS   AA+++E +R  ++ + +GQ  AA +LGL+
Sbjct: 76  ---GLPSFNISLDPTP-----AGVIALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T Q + +
Sbjct: 128 RRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIASTYQPLPL 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +Y  L  ++ L       ++AL  + 
Sbjct: 188 YLAAAAVYWVLCQILELLQRWYERRLALPSRH 219



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 32/70 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G V T   A   M    I G ++    +S ++ +  + RVYV V R  P LV IF 
Sbjct: 13  ALAQGAVLTVKFAVLSMFFGLIAGAVLALMGVSHSRTLNRLARVYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  + S   
Sbjct: 73  IYYGLPSFNI 82


>gi|224372630|ref|YP_002607002.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nautilia profundicola AmH]
 gi|223589466|gb|ACM93202.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nautilia profundicola AmH]
          Length = 272

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 11/255 (4%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            I  L+  F +     +          + F  F     +    LT         FSF++G
Sbjct: 23  VIAALLKAFQMVAYPETHFSEVFTKDNMRFLFFGKPGEIGGLALTFILAITSIFFSFIIG 82

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            +  +     +R    K  K   +LYI            L+ + + + F  PV     F 
Sbjct: 83  SIFGI-----ARWSSIKIIKIPAILYIELLRATP-----LLMVIFWVFFAIPVFSMAFFH 132

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             + VSP  ++  IA + +T+A++AEIVR+G+ ++P+GQ EAA +LG    +    ++LP
Sbjct: 133 TQAHVSPT-VAAIIAFTLFTSAYVAEIVRAGINSIPKGQFEAAKSLGFNSTQTFIYIILP 191

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA R +IP   SQ++ L K++SLA  +G  +       I N+   + EI      +Y S+
Sbjct: 192 QAYRKMIPAFVSQFVALFKDTSLAYTIGVIEFFRAATIINNRLYLSFEIFSFVALVYFSI 251

Query: 378 SIMIALFMNRLNAKI 392
           +  ++ F + L  K+
Sbjct: 252 AFSMSKFSHMLEKKV 266



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 37/62 (59%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF LA + +  + IIG++ G  R S+ K++     +Y+E+ R  P L+VIF+++ +
Sbjct: 63  GLALTFILAITSIFFSFIIGSIFGIARWSSIKIIKIPAILYIELLRATPLLMVIFWVFFA 122

Query: 152 VL 153
           + 
Sbjct: 123 IP 124


>gi|325135989|gb|EGC58599.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M0579]
 gi|325142042|gb|EGC64473.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           961-5945]
 gi|325198007|gb|ADY93463.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           G2136]
 gi|325202416|gb|ADY97870.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M01-240149]
 gi|325207832|gb|ADZ03284.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           NZ-05/33]
          Length = 238

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  FV   V+ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 37  PLAAASFVIGMVIAVAVALVRIMPAGGIARKILLKLVEFYIS--VIRGTPLLVQLVIVFY 94

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 95  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 143

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 144 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 203

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 204 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235


>gi|120609705|ref|YP_969383.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120588169|gb|ABM31609.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 217

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 12/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+F  +  L + L L    L+R         L   YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLKLFAITLGLAVPLGLAL-ALARVSRWGLLSGLVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+ ++ RGQ EAA  LG
Sbjct: 74  LPFVPVI--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEAAKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  R ++LPQ +R I+PP++++ + L+K++SL   +   DL+     I+ +     
Sbjct: 126 MTYGQTMRRIVLPQMVRRILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              L+    YL +++++     RL  + A  +
Sbjct: 185 TPFLVAAAFYLVMTLVLTWGFQRLERRYARHD 216



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    +  A  +G  +   R+S   L++ +   Y+ + R  P ++ + F+
Sbjct: 11  LAQGATVTLKLFAITLGLAVPLGLALALARVSRWGLLSGLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|325570568|ref|ZP_08146294.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156414|gb|EGC68594.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 493

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 18/230 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        ++    T+       +F  + G +L+       +    K  K +  +YI  
Sbjct: 282 FWEKYLPFYITGTGYTIFLALVGVLFGSIGGSLLAFM-----KLSKSKALKVIAAVYIE- 335

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV I + Y           F          +  +  IAL+  +AA++AEI+R
Sbjct: 336 -YVRGTPLLVQIFIVY-----------FGTGVLGLELSKLAAGCIALALNSAAYVAEIIR 383

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+   +G 
Sbjct: 384 AGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNEFVTVIKESSVVSVIGV 443

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++L+   G +   + +     +I   IY  L+  ++  +     ++   +
Sbjct: 444 SELIFQTGVVQGASFKPFLPYVIVSLIYFVLTFALSRLLGVAERRMKTSD 493



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T +LA  G++  +I G+L+   +LS +K +  I  VY+E  R  P LV 
Sbjct: 286 YLPFYITGTGYTIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQ 345

Query: 145 IFFLYKSV 152
           IF +Y   
Sbjct: 346 IFIVYFGT 353


>gi|293392788|ref|ZP_06637106.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291424647|gb|EFE97858.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 254

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 15/239 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FG 231
            +    +T+       +     G++L L     + H   K      + +     I    G
Sbjct: 15  FMEGAWMTIKCTLICVLLGTTWGLILGLGRLAQAPHGIWKHILHYGVQWPVRIYISAFRG 74

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAA 279
            P  V I + +       +  +   +  S +               F+S  +A++    A
Sbjct: 75  TPLFVQIMVVHFALVPLFINPRDGLLVTSGIMSSDFARALRSDYGAFLSCVVAITLNAGA 134

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++PPL +  + ++K+SS
Sbjct: 135 YVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPPLGNNAIAIVKDSS 194

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA A+G ADL     T+        E  L    +Y  ++ +++L +  +  +    + +
Sbjct: 195 LASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVITFVLSLMVQHMEKRFGKSDSR 253



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 49/129 (37%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVY 132
             YA   + G   T       ++  T  G ++G GRL+              V W  R+Y
Sbjct: 9   QEYAPLFMEGAWMTIKCTLICVLLGTTWGLILGLGRLAQAPHGIWKHILHYGVQWPVRIY 68

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +  FR  P  V I  ++ +++ +   P   +++  G+  ++   +  +      + +   
Sbjct: 69  ISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSGIMSSDFARALRSDYGAFLSCVVAI 128

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 129 TLNAGAYVS 137


>gi|229078176|ref|ZP_04210751.1| Amino acid ABC transporter [Bacillus cereus Rock4-2]
 gi|228705122|gb|EEL57533.1| Amino acid ABC transporter [Bacillus cereus Rock4-2]
          Length = 207

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 7   FTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 62

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 63  --YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 112

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 113 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 172

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY  +  ++++    L  +
Sbjct: 173 LIVYFEAGLIYWVICFLLSIVQQMLEKR 200



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 6   VFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 65

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 66  PTLNIEVEPYTAAVVGFSLN 85


>gi|227875551|ref|ZP_03993691.1| permease protein of ABC superfamily ATP binding cassette
           transporter system [Mobiluncus mulieris ATCC 35243]
 gi|306818861|ref|ZP_07452583.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Mobiluncus mulieris ATCC 35239]
 gi|307700944|ref|ZP_07637969.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
 gi|227843887|gb|EEJ54056.1| permease protein of ABC superfamily ATP binding cassette
           transporter system [Mobiluncus mulieris ATCC 35243]
 gi|304648547|gb|EFM45850.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Mobiluncus mulieris ATCC 35239]
 gi|307613939|gb|EFN93183.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
          Length = 302

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 6/261 (2%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           VFR    + V+      VL +  +  +       ++      +       T   + V + 
Sbjct: 13  VFRPGRLISVVLVAALVVLIINSLITNPNYHWDKVWEYLFHPTIIRGIGFT-LVLTVAAM 71

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +G+VL++    + R       K++   YI  F   G P    +     L    P +G  
Sbjct: 72  FIGVVLAV-TMAIMRQSPNPVLKSVAWFYIWFF--RGTPIYTQLIFWGLLPTLYPFVGVG 128

Query: 255 NF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            F I  + V     +  + L     A++AEIVR+GL +V  GQ EAA ALG+      R 
Sbjct: 129 VFKIDINVVWNVLWAAILGLGLNEGAYLAEIVRAGLNSVDPGQWEAATALGMKRSLIMRR 188

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMF 372
           ++LPQAMR I+PP  ++ +++LK +SL  A+ F  +L      +  Q    + +++    
Sbjct: 189 IILPQAMRVIVPPTGNETISMLKTTSLVSAIPFTMELTFAAQALGRQIFMPVPMLISAAI 248

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
            YL ++ ++ +    L     
Sbjct: 249 WYLVVTSILMVGQFYLEKHFG 269



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  L  + M    ++   +   R S N ++  +   Y+  FR  P    + F 
Sbjct: 56  IIRGIGFTLVLTVAAMFIGVVLAVTMAIMRQSPNPVLKSVAWFYIWFFRGTPIYTQLIFW 115

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG 175
                    +      +   +  N   
Sbjct: 116 GLLPTLYPFVGVGVFKIDINVVWNVLW 142


>gi|313885015|ref|ZP_07818767.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619706|gb|EFR31143.1| ABC transporter, permease protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 483

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 17/180 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + +F+LG +L L      +  H    + +  +YI   ++ GLP LV   L + 
Sbjct: 290 MATILSLIIAFILGTLLGLM-----KASHNNILRGVSTVYID--IMRGLPLLV---LAFF 339

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F  P +    F          ++  + L    AA++AEIVR G+ ++ +GQMEA  +L
Sbjct: 340 IYFGIPQMTGIKF-------SNLIAGVLTLGLNAAAYVAEIVRGGVQSIAQGQMEAGRSL 392

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+ +   + ++LPQA + ++P   +Q++  LK++S+   +G  +L   G  II +T Q+
Sbjct: 393 GLSRKTTMKKIVLPQAFKIMLPSFINQFVITLKDTSILSVIGMVELTQTGRIIIARTYQS 452



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 39/68 (57%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A++VG   T       +I A I+GTL+G  + S N ++  +  VY+++ R +P LV+ FF
Sbjct: 280 ALMVGLGKTLMATILSLIIAFILGTLLGLMKASHNNILRGVSTVYIDIMRGLPLLVLAFF 339

Query: 148 LYKSVLSV 155
           +Y  +  +
Sbjct: 340 IYFGIPQM 347


>gi|284800042|ref|ZP_05985523.2| L-cystine ABC transporter, permease protein [Neisseria subflava
           NJ9703]
 gi|284796209|gb|EFC51556.1| L-cystine ABC transporter, permease protein [Neisseria subflava
           NJ9703]
          Length = 227

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 FV   ++ + ++L     S    +K    L   YIS  +I G P LV + + + 
Sbjct: 26  PLAIASFVIGMIIAVAVALVRIMPSGGIFQKCLLKLVEFYIS--VIRGTPLLVQLVIVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 84  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 133 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 193 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224


>gi|120406977|ref|YP_956806.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119959795|gb|ABM16800.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 598

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 16/238 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                              +     + V + ++G++L   A  ++     +  +    +Y
Sbjct: 357 SFLDWDLYKQAIPDLFKTGLPNTLILTVAASIIGLILG-MALAIAGISKSRWLRWPARIY 415

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              F   GLP +V+I L          LG    +G  T +  F     AL    AA++ E
Sbjct: 416 TDIF--RGLPEVVIILLI--------GLGVGPVVGHLTGNNPFPLGIAALGLMAAAYVGE 465

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG+ +V  GQ+EA+ ALG ++  + RLV++PQ +R ++P L +Q+++LLK SSL   
Sbjct: 466 IFRSGIQSVDPGQLEASRALGFSYPTSMRLVVVPQGVRRVLPALMNQFISLLKASSLVYF 525

Query: 344 VGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G      +L  VG  +  QTG  +  ++     YL+L+I +   +N ++ ++    K
Sbjct: 526 LGLIANQRELFQVGRDLNAQTGN-LSPLVAAGLFYLALTIPLTHLVNFIDTRLRRGRK 582



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 67/216 (31%), Gaps = 13/216 (6%)

Query: 72  IDQGIVPYTSDSSYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           + Q    +     Y  A       G  NT  L  +  I   I+G  +    +S ++ + W
Sbjct: 351 LSQLAASFLDWDLYKQAIPDLFKTGLPNTLILTVAASIIGLILGMALAIAGISKSRWLRW 410

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             R+Y ++FR +P +V+I  +   V  V+     +   P G+       +     +  + 
Sbjct: 411 PARIYTDIFRGLPEVVIILLIGLGVGPVVGHLTGNNPFPLGIAALGLMAAAYVGEIFRSG 470

Query: 188 KIFVFSFVLGI--VLSLFATRLSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQ 243
              V    L     L        R      G  + LP L      +    +LV     Y 
Sbjct: 471 IQSVDPGQLEASRALGFSYPTSMRLVVVPQGVRRVLPALMNQFISLLKASSLV-----YF 525

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           L         F            +S  +A   +  A
Sbjct: 526 LGLIANQRELFQVGRDLNAQTGNLSPLVAAGLFYLA 561


>gi|283853864|ref|ZP_06371080.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283570739|gb|EFC18783.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 233

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 76/236 (32%), Positives = 113/236 (47%), Gaps = 5/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               FG  ++     +    + T  KI   S VL + L      L R    +    +   
Sbjct: 3   YTFDFGQVVSGEYGQWLVSGLVTTLKISSLSIVLSLGLGTLVAVL-RLSKVRPLVWISAG 61

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +   F     P LV I   Y   +   +L  F          EF    IAL+ YTAAFIA
Sbjct: 62  FTEFF--RNTPLLVQIFFWYFGSYS--ILPNFVNEWLYKQDFEFACGVIALTVYTAAFIA 117

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSG+ ++P+ Q+EA+ A GL+  +A   V+LPQA R IIPPL SQ+LNL+KNSSL +
Sbjct: 118 EEIRSGIFSIPKNQLEASRACGLSFVQAMGYVILPQAFRVIIPPLISQFLNLIKNSSLVM 177

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  DL  +   I   T    E   +   +YL++S+ ++L +N  N ++     +
Sbjct: 178 TIGVMDLTYMARQIEAHTFHGFEAFTVSTCMYLAISLTVSLGVNIYNRRVLHVRSR 233



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 41/85 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ G V T  ++   ++ +  +GTLV   RLS  + + WI   + E FRN P 
Sbjct: 12  SGEYGQWLVSGLVTTLKISSLSIVLSLGLGTLVAVLRLSKVRPLVWISAGFTEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV IFF Y    S+LP   +  +  
Sbjct: 72  LVQIFFWYFGSYSILPNFVNEWLYK 96


>gi|148974813|ref|ZP_01811793.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145965322|gb|EDK30571.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 265

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 19/276 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
              ++ + ++ V     +  L               +PD+      G +     +    +
Sbjct: 7   KPALSALVQIVVLAAAVVWILDSGAQAMGYSWQWDRVPDYIAFYEDGEWWPAELMEGLLV 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T++ +    V + V+G+  +L      R+ H   G+ L   Y+   LI   P LV I L 
Sbjct: 67  TINISLISLVATLVIGLTTALL-----RNSHSVVGRTLATSYVE--LIRNTPLLVQIYLL 119

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +AL+ +  A+ AEI R+GL ++ +GQ EAA 
Sbjct: 120 YFVF------------GPVIGLDRFSTAVLALALFQGAYTAEIFRAGLNSISKGQFEAAQ 167

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+       V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T 
Sbjct: 168 SLGLSKTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETA 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              EI      IYL+L++ ++     L  K+    +
Sbjct: 228 MPFEIWFSVAIIYLALTLSLSAVAAWLEHKLGANWR 263



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 13/123 (10%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATA-I 89
           ++  ++L    +W +++    M       G  +  +R         + +  D  +  A +
Sbjct: 13  LVQIVVLAAAVVWILDSGAQAM-------GYSWQWDR-----VPDYIAFYEDGEWWPAEL 60

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G + T  ++   ++   +IG      R S + +   +   YVE+ RN P LV I+ LY
Sbjct: 61  MEGLLVTINISLISLVATLVIGLTTALLRNSHSVVGRTLATSYVELIRNTPLLVQIYLLY 120

Query: 150 KSV 152
              
Sbjct: 121 FVF 123


>gi|224824086|ref|ZP_03697194.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224603505|gb|EEG09680.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 247

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 14/247 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---------TRLSRHFHEKT 215
           + F   +    L            I + + + G ++ LF            +S+      
Sbjct: 1   MNFRWEMITEYLPLFIDGAKMTLLITIVAVIFGTLIGLFMGVARLAEGKHGISKIVLRYL 60

Query: 216 GKALPLLYISTFL---IFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLY 270
            +     Y++ F    +F    LV  AL   L    D  +L              F+S  
Sbjct: 61  VRLPATAYVTFFRGTPLFVQILLVHFALMPMLIHPVDGIILSGDIAREIRQNYGAFISGL 120

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+    A+I EI R+G+ ++ +GQMEAA +LGL++ +A + V++PQA R ++PPL ++
Sbjct: 121 LALTLNAGAYITEIFRAGIQSIDKGQMEAARSLGLSYGQAMKAVIVPQAFRRMLPPLGNE 180

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK+SSL  A+G A+L     T+     +  E  L   F+YL+L++++A  + RL  
Sbjct: 181 AIMLLKDSSLVSAIGLAELAFAARTVAGVYSRYWEPYLTISFLYLALTMLMAWGIGRLEK 240

Query: 391 KIALKEK 397
           +  +  +
Sbjct: 241 RFQIASR 247



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVE 134
           Y    + G   T  +    +I  T+IG  +G  RL+             LV      YV 
Sbjct: 11  YLPLFIDGAKMTLLITIVAVIFGTLIGLFMGVARLAEGKHGISKIVLRYLVRLPATAYVT 70

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR  P  V I  ++ +++ +L  P   I+L   +    R      ++      +   ++
Sbjct: 71  FFRGTPLFVQILLVHFALMPMLIHPVDGIILSGDIAREIRQNYGAFISGLLALTLNAGAY 130

Query: 195 VLGIVLS 201
           +  I  +
Sbjct: 131 ITEIFRA 137


>gi|49183380|ref|YP_026632.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|49177307|gb|AAT52683.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Sterne]
          Length = 291

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 19/255 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L          L      + + +    M      L    +T+       V   ++G++ +
Sbjct: 40  LCPTLCGAFHSLLKSIQYEVTHMFEIFMSTYPTLLKATIVTLQLTLTSLVLGSLIGLLFA 99

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
            F     R  + K   ++  +YI   +I G P +V IA+ Y              I    
Sbjct: 100 FF-----RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVV 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   F +  IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R
Sbjct: 141 VFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFR 200

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +PPL +Q++  LK+SSL   VG A+L   G +I     Q ++  +I    YL L ++ 
Sbjct: 201 QSLPPLGNQFIIGLKDSSLVAYVGMAELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLF 260

Query: 382 ALFMNRLNAKIALKE 396
              +N L  ++  KE
Sbjct: 261 TYLVNLLEKRLQRKE 275



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 73  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 132

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 133 YFGITSVVVFTPFWAGAIALAIHNGAYI 160


>gi|294101423|ref|YP_003553281.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616403|gb|ADE56557.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 217

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                         K  + +  LG ++ +    L R    K  K L   YI  ++I G P
Sbjct: 10  PYWHMFVTGAVFTVKASILAVTLGSIMGILIGAL-RVVPVKPIKGLAAAYI--YVIRGTP 66

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ + L Y           F         P F +  I LS  +A ++ EIVR G+ AVP
Sbjct: 67  LLIQLFLIY-----------FGLPSLGINLPAFTAGIIGLSINSAGYVGEIVRGGIEAVP 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA  LGL++    R ++LPQA+R+++P L ++++ L+K SSL   +  A+L  VG
Sbjct: 116 KGQWEAAKVLGLSYLGTMRHIILPQAIRNMLPALGNEFVTLIKESSLLSTLAIAELTMVG 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             + + T  + E  ++   IYL L+   ++ +  +  +  +
Sbjct: 176 QQVRSVTYASFETFIMVGLIYLCLTSFTSIALQLIEKRWQV 216



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 43/97 (44%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ ++S   Y    + G V T   +   +   +I+G L+GA R+   K +  +   Y+ V
Sbjct: 2   MLDFSSIVPYWHMFVTGAVFTVKASILAVTLGSIMGILIGALRVVPVKPIKGLAAAYIYV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            R  P L+ +F +Y  + S+            G+ +N
Sbjct: 62  IRGTPLLIQLFLIYFGLPSLGINLPAFTAGIIGLSIN 98


>gi|229148755|ref|ZP_04277005.1| Amino acid ABC transproter, permease [Bacillus cereus m1550]
 gi|228634763|gb|EEK91342.1| Amino acid ABC transproter, permease [Bacillus cereus m1550]
          Length = 251

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I       L      +   +    +      L    +T+       V   ++G++ + F 
Sbjct: 3   ILCGAFHSLLKSIQYEVKRMFEIFISSYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF- 61

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  + K   ++  +YI   +I G P +V IA+ Y              I    V  
Sbjct: 62  ----RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFT 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +
Sbjct: 104 PFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F
Sbjct: 164 PPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGAYYLVLVLLFTYF 223

Query: 385 MNRLNAKIALKE 396
           +N L  ++  KE
Sbjct: 224 VNLLENRLQRKE 235



 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 33  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 93  YFGITSVVVFTPFWAGAIALAIHNGAYI 120


>gi|89053402|ref|YP_508853.1| amino acid ABC transporter permease [Jannaschia sp. CCS1]
 gi|88862951|gb|ABD53828.1| amino acid ABC transporter membrane protein, PAAT family
           [Jannaschia sp. CCS1]
          Length = 265

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
             F  +   L V        +    ++          + +     +  F+    + L L 
Sbjct: 9   QDFPWWLVALGVFAAYALWQLWTSEIYWQVLTTLRRGVWITVIVTLVGFAMASLMGLGLA 68

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGG--- 259
              LSR       + +   YI       +  L+L IA  +              +G    
Sbjct: 69  LMSLSRRL---IPRQIARFYIEVVRGVPIIVLLLYIAFVFAPGLVAAYNWVAEALGMEGV 125

Query: 260 -STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            +   P      IAL+   +AFIAE+ R+GL +V  GQ+EAA ALGL      R ++ PQ
Sbjct: 126 RTRDFPLLWRAVIALAIGYSAFIAEVFRAGLQSVDPGQIEAANALGLNRWNRFRHIIFPQ 185

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+I+PPL + ++ ++K+SSL   +G  D+  +G        +  E   +   IYL+++
Sbjct: 186 AIRTILPPLGNDFVAMVKDSSLVSVLGVLDVTQLGKVTAASNFRYFETYNVVALIYLTIT 245

Query: 379 IMIALFMNRLNAKIALKEKK 398
           + +++ + R+  ++   E++
Sbjct: 246 VTLSILLRRMEKRMRQGERR 265



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 41/119 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               T +  G   T  +   G   A+++G  +    LS   +   I R Y+EV R +P +
Sbjct: 36  WQVLTTLRRGVWITVIVTLVGFAMASLMGLGLALMSLSRRLIPRQIARFYIEVVRGVPII 95

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           V++ ++       L    + +    GM                   I   +F+  +  +
Sbjct: 96  VLLLYIAFVFAPGLVAAYNWVAEALGMEGVRTRDFPLLWRAVIALAIGYSAFIAEVFRA 154


>gi|260578024|ref|ZP_05845947.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Corynebacterium
           jeikeium ATCC 43734]
 gi|258603851|gb|EEW17105.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Corynebacterium
           jeikeium ATCC 43734]
          Length = 315

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 8/264 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +++   +   ++S      +     F   L+ R +     T+       +   V+
Sbjct: 28  RWIAAVILAALVVWFIISAARNDAYHWDTYFQYLLDTRIVKAAMHTIALTILAMIIGVVI 87

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQLHFDKPVLGQFN 255
           G ++++      R       + +  L++  F    +   LV   L   L+    V     
Sbjct: 88  GAIVAVL-----RMSPNPVLQGVAWLFLWVFRGTPVYVQLVFWGLLSSLYQSVSVGFA-E 141

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 +   F+   + L    AA++AEIVR+G+ AVP GQ EA+ ALG+T  +  R  +
Sbjct: 142 IDLEQVLQNAFILAVLGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWGQNMRRTV 201

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +PQAMR IIPP  +++++LLK +SL +AV + A+L      I N   Q + ++L+    Y
Sbjct: 202 MPQAMRIIIPPTGNEFISLLKTTSLVIAVPYTAELYGRATDISNSLFQPVPLLLVAATWY 261

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ ++ +    +    +    +
Sbjct: 262 LVITSILMVVQFYVERYYSRGSSR 285



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 83  SSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +Y   +L        ++T  L    MI   +IG +V   R+S N ++  +  +++ VFR
Sbjct: 55  DTYFQYLLDTRIVKAAMHTIALTILAMIIGVVIGAIVAVLRMSPNPVLQGVAWLFLWVFR 114

Query: 138 NIPPLVVIFFLY 149
             P  V + F  
Sbjct: 115 GTPVYVQLVFWG 126


>gi|308388974|gb|ADO31294.1| amino acid permease integral membrane protein [Neisseria
           meningitidis alpha710]
          Length = 227

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  FV   ++ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 26  PLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYIS--VIRGTPLLVQLVIVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 84  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 133 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 193 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224


>gi|213650338|ref|ZP_03380391.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
          Length = 184

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 13/193 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R       + L   YIS F   G P +  + + Y        L QF           
Sbjct: 3   ALMRMSPLWPVRWLARFYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDP 49

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  R  +LPQA R  +P
Sbjct: 50  IPAAMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALP 109

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   
Sbjct: 110 PLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQ 169

Query: 386 NRLNAKIALKEKK 398
           N    ++  +E++
Sbjct: 170 NYFENQLNRQERE 182



 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%)

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++   R+S    V W+ R Y+ +FR  P +  +F +Y  +       D       G+ LN
Sbjct: 1   MLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPIPAAMIGLSLN 60

Query: 173 NRGLSFPTLTMDTNAK 188
               +  TL    +A 
Sbjct: 61  TAAYTSETLRAAISAI 76


>gi|312961013|ref|ZP_07775518.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas fluorescens WH6]
 gi|311284671|gb|EFQ63247.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas fluorescens WH6]
          Length = 258

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 5/233 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI----S 225
           F  +    +              + ++ ++  L    L            PLL++     
Sbjct: 3   FNWDVFWQYLLQPSGVYLTGLWLTCLISVLAMLLGCALGLAAALLRLSKNPLLHLPVRFY 62

Query: 226 TFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            +L+ G P LV I   Y  L        +   + G  V     +  IAL     A++AEI
Sbjct: 63  VWLMRGTPLLVQIVFLYTALAAGGIFRFEDIELFGLIVPGNIQAAIIALGLNEGAYMAEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EA  +LG+   K  R ++LPQA R I+PPL +++  +LKN++L   +
Sbjct: 123 IRAGIGAVDKGQYEAGRSLGMGFGKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +L+     + + T +  E+ L+    +L+L+ +   F   L  +    ++
Sbjct: 183 GVQELLLSTQMVTSATFRVFELYLVVAIYFLTLTTLWGFFQRWLENRFGQSDR 235


>gi|257440502|ref|ZP_05616257.1| glutamine ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
 gi|257197124|gb|EEU95408.1| glutamine ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
          Length = 254

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 21/246 (8%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS-LFATRLSRHFHEKTGKA 218
                  +  F+ N         + T   +   +  LG+VL  + A     H  ++ G+ 
Sbjct: 22  QEMFFKFYQAFILNDRWVQYIQGVGTTLLVTAIALALGVVLGSVVALVRVAHDQQRPGRR 81

Query: 219 LPLL-------YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
            P+L        + T +I G P +V + +   + F             S      M   +
Sbjct: 82  NPVLGFFNAVCQVYTTIIRGTPMMVQLLIMSMVIF-------------SNSRNFTMVGAL 128

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   + A+++EI+R GL+AV  GQMEA  +LGL +     ++++PQA+R+++P L +++
Sbjct: 129 ALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIVIPQAIRAVLPALGNEF 188

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + LLK++SL   +G  +L+     I+N+T +A+  +L    +YL L ++    +++   +
Sbjct: 189 IVLLKDTSLITVIGGKELLYAAQGIMNRTYEAMFPLLGVAVVYLILVMLFTWLLSKFERR 248

Query: 392 IALKEK 397
           +A  ++
Sbjct: 249 MAQGDR 254


>gi|228996156|ref|ZP_04155807.1| Amino acid ABC transporter [Bacillus mycoides Rock3-17]
 gi|228763606|gb|EEM12502.1| Amino acid ABC transporter [Bacillus mycoides Rock3-17]
          Length = 226

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +FV+GI+L++F T L+R    +  + +  +Y+S  +I
Sbjct: 12  IMQASFMPMLEGALFTTIPLTIITFVIGIILAIF-TALARISSSRLLQWIARIYVS--II 68

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +                 +     + +  I  S    A+ +EI+R+ +
Sbjct: 69  RGTPLLVQLFIIFY-----------GLPTLNIEIDPYPAAIIGFSLNVGAYASEIIRASI 117

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + ++LPQA R  IPPL++ +++L+K++SLA  +   +L
Sbjct: 118 LSIPKGQWEAAYTIGMTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTEL 177

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY ++  ++++    L  +
Sbjct: 178 FRKAQEIAAMNYEFLIVYFEAGLIYWAICFLLSIVQQILEKR 219



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     +   I+       R+S+++L+ WI R+YV + R  P LV +F ++  +
Sbjct: 25  LFTTIPLTIITFVIGIILAIFTALARISSSRLLQWIARIYVSIIRGTPLLVQLFIIFYGL 84

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    D       G  LN
Sbjct: 85  PTLNIEIDPYPAAIIGFSLN 104


>gi|54302942|ref|YP_132935.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
 gi|46916370|emb|CAG23135.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 276

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 19/287 (6%)

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           T        G      +++ + ++ V     I  L               IP +   +  
Sbjct: 6   TFSTAAPSVGYRILKPVLSGLLQIAVVTLGLIWLLNAGAEAMNYRWQWYRIPQYLWFIDD 65

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G +     L    +T+  +A   +F+ ++G+V +L      R      G+ L   YI   
Sbjct: 66  GEWFPAELLEGLFVTLKISAVSLIFTLLIGLVTALL-----RLSDSIVGRGLARGYIE-- 118

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI   P LV I L Y +             G       F +  +ALS +  A+ AEI R+
Sbjct: 119 LIRNTPLLVQIYLLYFVF------------GPVLGLERFTTAVLALSLFQGAYTAEIFRA 166

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL  +P+GQ EA  +LGL+     R V+LPQ +R I+PPLT++ ++L+KNSS+   +   
Sbjct: 167 GLNNIPKGQFEACSSLGLSAIDGYRFVILPQMIRRILPPLTNETVSLVKNSSIVSIMAIF 226

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           DL + G  I+  T    E+      IYL +++M++ F   L  K+ +
Sbjct: 227 DLTTEGRNIVADTAMPFEVWFTVAGIYLCVTLMLSGFAAWLEHKMNV 273



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +I   +IG +    RLS + +   + R Y+E+ RN P LV I+ L
Sbjct: 73  LLEGLFVTLKISAVSLIFTLLIGLVTALLRLSDSIVGRGLARGYIELIRNTPLLVQIYLL 132

Query: 149 YKSV 152
           Y   
Sbjct: 133 YFVF 136


>gi|113460357|ref|YP_718418.1| amino acid ABC transporter permease [Haemophilus somnus 129PT]
 gi|112822400|gb|ABI24489.1| amino acid ABC transporter membrane protein, PAAT family
           [Haemophilus somnus 129PT]
          Length = 238

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 101/215 (46%), Gaps = 13/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+   V+ I ++L     S     +    +  +YIS  +I G P LV I++ + 
Sbjct: 37  PLAIVSFILGMVIAIAVALIRVSPSHSIIHRLFLFITKIYIS--IIRGTPMLVQISIVF- 93

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P LG F             +  I  S    A+ +E VR+ + +VP+GQ EA   +
Sbjct: 94  --YGLPALGIF--------IDPIPAAIIGFSLNVGAYASETVRAAIQSVPKGQWEAGYTI 143

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R +++PQA R  +PPL++ +++L K++SLA  V   ++  V   + N +   
Sbjct: 144 GMTYMQTFRRIIVPQAFRVAVPPLSNTFISLFKDTSLASVVTVTEMFRVAQQVANMSYDF 203

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + + +    IY     ++ L+  R+  K+A    +
Sbjct: 204 LPVYIEAALIYWCFCFILFLWQARIEKKLARYVTR 238


>gi|255281311|ref|ZP_05345866.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Bryantella formatexigens DSM 14469]
 gi|255268268|gb|EET61473.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Bryantella formatexigens DSM 14469]
          Length = 230

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 4/218 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                    I V + +LG++         R       +++   Y+    I G P LV I 
Sbjct: 16  WNGTKITLLISVMTIILGLICGTL-MAFMRISKSPVLRSIAAAYVEF--IRGTPVLVQIF 72

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + Y        +   + + G       +S  +ALS  + A+I EIVRSG+ ++  GQ E 
Sbjct: 73  IVYY-GLPMMGIEIPSIMFGGVDISRLLSGTVALSVNSTAYICEIVRSGIQSIDIGQTEG 131

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+ALGL  R+    V+LPQA+++IIP L ++++ ++K SS    +G A+L+    TI   
Sbjct: 132 AMALGLNGRRRMWYVILPQAIKNIIPALANEFVTVIKTSSQVSVIGIAELMYAADTIRGI 191

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + + +E +LI   IY  ++  ++  + R+   +    +
Sbjct: 192 SFRPMEPLLIVAVIYFIITFSLSCVIRRIEKNMRRSSR 229



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 36/81 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y   +  G   T  ++   +I   I GTL+   R+S + ++  I   YVE  R  P L
Sbjct: 9   STYRVLLWNGTKITLLISVMTIILGLICGTLMAFMRISKSPVLRSIAAAYVEFIRGTPVL 68

Query: 143 VVIFFLYKSVLSVLPIPDHSI 163
           V IF +Y  +  +       +
Sbjct: 69  VQIFIVYYGLPMMGIEIPSIM 89


>gi|118444342|ref|YP_877030.1| amino acid ABC transporter, permease protein [Clostridium novyi NT]
 gi|118134798|gb|ABK61842.1| amino acid ABC transporter, permease protein [Clostridium novyi NT]
          Length = 232

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 16/228 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L+   +T+  +    +FS +LG + +L      +    K  K +  ++I   ++ G P 
Sbjct: 15  FLNGAGITIVLSLITVIFSSILGTIFALM-----KLSKIKILKVISNVFIE--IVRGTPL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTV------SPEFMSLYIALSCYTAAFIAEIVRSG 288
           LV +   Y  ++  P L Q   +    +            + I L+  + A++AEI+RSG
Sbjct: 68  LVQV---YIFYYGIPTLLQNAGVELPQIDVMGNDFTGLCMIVITLALNSTAYVAEIIRSG 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V +GQMEAA +LGLTHR A R V++PQA+++I+P L ++++ ++K SS+   VG  +
Sbjct: 125 IESVNKGQMEAARSLGLTHRMAMRYVIIPQAIKNILPALGNEFITVIKESSIVSVVGIKE 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+         T       L    +Y  L+  ++  +     ++ L +
Sbjct: 185 LMRNAQAASGATMMIFTPYLTAAAMYFILTFTLSKLLGIFERRMKLSD 232


>gi|87121722|ref|ZP_01077609.1| putative amino-acid transport system permease abc transporter
           protein [Marinomonas sp. MED121]
 gi|86162973|gb|EAQ64251.1| putative amino-acid transport system permease abc transporter
           protein [Marinomonas sp. MED121]
          Length = 270

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 10/221 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIF-GLPTLVL 237
                F+ + ++G++++L      R       F+ +  + +P+L +  ++ F G P LV 
Sbjct: 51  VTLIAFLIACIIGLIMALAGFSRYRLIREVARFYVEVIRGVPVLVLLFYIAFVGAPELVD 110

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
               Y     KP+  Q+     +          +AL    +AFIAE+ R+G+  V +GQ+
Sbjct: 111 F---YNWLMQKPIEWQWVDKARTRDFNMVWRAILALCISYSAFIAEVFRAGIQEVDKGQI 167

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALGL+  +  R ++ PQA R I+PPL + ++ ++K+S+L  A+G  D+  +G    
Sbjct: 168 EAAKALGLSGWQRFRFIIFPQAFRKILPPLGNDFVAMIKDSALVSALGVQDITQLGKVYS 227

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + + Q  E   +  F+YL L+I ++L +      +  K+K 
Sbjct: 228 SSSFQFFETYNVVAFVYLCLTITLSLLIRGFEQYLNRKQKH 268



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +G  +   I   T        +  G   T  +     + A IIG ++     S  +L+  
Sbjct: 20  SGILLTWNIAADTGYQKIFNTLSQGIATTVTVTLIAFLIACIIGLIMALAGFSRYRLIRE 79

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + R YVEV R +P LV++F++       L    + ++     +            M   A
Sbjct: 80  VARFYVEVIRGVPVLVLLFYIAFVGAPELVDFYNWLMQKPIEWQWVDKARTRDFNMVWRA 139

Query: 188 KIFV 191
            + +
Sbjct: 140 ILAL 143


>gi|320011628|gb|ADW06478.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 300

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +        L + +  ++  P     +          L    +T+       V  F 
Sbjct: 38  WRWVAVAATAVLLAQFLNGLITNPGWEWGVFARFVTTETILHAVWVTLQLTFYGTVTGFA 97

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDK 248
           LGIVL+       R       +A+   YI  F    +P +V +   + L        F  
Sbjct: 98  LGIVLAFM-----RLSDSPFLRAVSYAYIWAF--RSIPLIVQLLFWFNLAYLYKELQFGI 150

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F       +     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   
Sbjct: 151 PFGPGFVSFDTMNLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVDGGQLEAAAALGIPRL 210

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      +  + G+ + +++
Sbjct: 211 RQLRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLM 270

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+ ++++  + +    A    +
Sbjct: 271 VATVWYILLTTVLSVLQHYVERHYAKGAVR 300



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 44/143 (30%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  L F G +    +G ++   RLS +  +  +   Y+  FR+IP +V + F 
Sbjct: 77  ILHAVWVTLQLTFYGTVTGFALGIVLAFMRLSDSPFLRAVSYAYIWAFRSIPLIVQLLFW 136

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +        +       P  +  +   L            +   ++   IV         
Sbjct: 137 FNLAYLYKELQFGIPFGPGFVSFDTMNLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVDG 196

Query: 209 RHFHEKTGKALPLLYISTFLIFG 231
                     +P L     ++  
Sbjct: 197 GQLEAAAALGIPRLRQLRRIVLP 219


>gi|229126284|ref|ZP_04255302.1| Amino acid ABC transporter [Bacillus cereus BDRD-Cer4]
 gi|229137673|ref|ZP_04266278.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST26]
 gi|229195190|ref|ZP_04321965.1| Amino acid ABC transporter [Bacillus cereus m1293]
 gi|228588419|gb|EEK46462.1| Amino acid ABC transporter [Bacillus cereus m1293]
 gi|228645788|gb|EEL02017.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST26]
 gi|228657276|gb|EEL13096.1| Amino acid ABC transporter [Bacillus cereus BDRD-Cer4]
          Length = 207

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 7   FTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 62

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 63  --YGLPTLN--------IEVEPYTAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 112

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 113 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 172

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY  +  ++++    L  +
Sbjct: 173 LIVYFEAGLIYWVICFLLSIVQQMLEKR 200



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 6   VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 65

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 66  PTLNIEVEPYTAAVVGFSLN 85


>gi|222109927|ref|YP_002552191.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           ebreus TPSY]
 gi|221729371|gb|ACM32191.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax ebreus TPSY]
          Length = 217

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+F  + VL + L L    L+R        A    YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLKLFAITLVLAVPLGLVL-ALARVSRFAPLSAAVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +   A +   AA+ AEI R+G+ +V RGQ EAA  LG
Sbjct: 74  LPFVPVI--------GVRLPDFPAAVAAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++ +  R ++LPQ +RSI+PP++++ + L+K++SL   +   DL+     I+ +     
Sbjct: 126 MSYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              ++    YL +++++     RL  + A  ++
Sbjct: 185 TPFIVAAAFYLVMTLVLTWGFQRLEKRYAKFDQ 217



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    ++ A  +G ++   R+S    ++     Y+ + R  P ++ + F+
Sbjct: 11  LAQGAAVTLKLFAITLVLAVPLGLVLALARVSRFAPLSAAVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|229003760|ref|ZP_04161571.1| Amino acid ABC transporter [Bacillus mycoides Rock1-4]
 gi|228757493|gb|EEM06727.1| Amino acid ABC transporter [Bacillus mycoides Rock1-4]
          Length = 209

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 111/216 (51%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      + T   + + +FV+GI+L++F T L+R    +  + +  +Y+S  +I G P L
Sbjct: 1   MPMLEGALFTTIPLTIITFVIGIILAIF-TALARISSSRLLQWIARIYVS--IIRGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +   +  P L              + +  I  S    A+ +EI+R+ ++++P+G
Sbjct: 58  VQLFIIF---YGLPTLN--------IEIDPYPAAIIGFSLNVGAYASEIIRASILSIPKG 106

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+T+ +A + ++LPQA R  IPPL++ +++L+K++SLA  +   +L      
Sbjct: 107 QWEAAYTIGMTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTELFRKAQE 166

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I     + + +      IY ++  ++++    L  +
Sbjct: 167 IAAMNYEFLIVYFEAGLIYWAICFLLSIVQQILEKR 202



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     +   I+       R+S+++L+ WI R+YV + R  P LV +F ++  +
Sbjct: 8   LFTTIPLTIITFVIGIILAIFTALARISSSRLLQWIARIYVSIIRGTPLLVQLFIIFYGL 67

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    D       G  LN
Sbjct: 68  PTLNIEIDPYPAAIIGFSLN 87


>gi|288575665|ref|ZP_05977394.2| L-cystine ABC transporter, permease protein [Neisseria mucosa ATCC
           25996]
 gi|288567449|gb|EFC89009.1| L-cystine ABC transporter, permease protein [Neisseria mucosa ATCC
           25996]
          Length = 227

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 13/217 (5%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
             +++      F+   V+ I ++L     +     K    L   YIS  +I G P LV +
Sbjct: 21  FMVSLPLAVASFLIGMVIAIAVALVRIMPAGGIVRKILLKLVETYIS--IIRGTPLLVQL 78

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +   +  P +G F             +  I  S    A+ +E +R+ +++VP+GQ E
Sbjct: 79  VIVF---YGLPSVGIF--------IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWE 127

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A  ++G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N
Sbjct: 128 AGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETAN 187

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +T   + + +    +Y     ++ L   RL  +    
Sbjct: 188 RTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224


>gi|325062906|gb|ADY66596.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           sp. H13-3]
          Length = 601

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 11/266 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +  +  +  +   + SV   P     +    F     L     T+   A   V  F 
Sbjct: 36  LRTVGTVFSVLIIAAVLHSVFGNPRWGWDVFAEWFFAEPVLVGLGRTLLLTALGAVLGFA 95

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPV 250
           LG +L+L     +R        A+   YI  F    L  L+LI      L   +    P 
Sbjct: 96  LGTLLAL-----ARVSRSPLLVAVSWTYIWIFRSIPLIVLLLILNNLGYLYETVTIGVPY 150

Query: 251 LGQFNFIGGST-VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            G   F   +T +   F +  + L+   AAF +EIVR G+++V +GQ+EAA ALGL  R+
Sbjct: 151 TGINFFSWNTTQLMTPFAAAVLGLTLNQAAFASEIVRGGILSVDQGQLEAAAALGLPRRR 210

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQAMRSI+P   +  + L K +S    +   +L      I  +  + I ++++
Sbjct: 211 QASRIVLPQAMRSILPTAFNDIIGLAKGTSQVYILALPELFYTIQIIYRRNLEVIPLLMV 270

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               YL +   +++  + +    +  
Sbjct: 271 ATVWYLVILTALSIVQHHIERHFSRG 296



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 1/113 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-PLVVIFFL 148
           LVG   T  L   G +    +GTL+   R+S + L+  +   Y+ +FR+IP  ++++   
Sbjct: 76  LVGLGRTLLLTALGAVLGFALGTLLALARVSRSPLLVAVSWTYIWIFRSIPLIVLLLILN 135

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
               L                  N   L  P         +   +F   IV  
Sbjct: 136 NLGYLYETVTIGVPYTGINFFSWNTTQLMTPFAAAVLGLTLNQAAFASEIVRG 188


>gi|255066834|ref|ZP_05318689.1| L-cystine ABC transporter, permease protein [Neisseria sicca ATCC
           29256]
 gi|255048909|gb|EET44373.1| L-cystine ABC transporter, permease protein [Neisseria sicca ATCC
           29256]
          Length = 227

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 13/217 (5%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
             +++      F+   V+ I ++L     S     K    L   YIS  +I G P LV +
Sbjct: 21  FMVSLPLAVASFLIGMVIAIAVALVRIMPSGGIVRKILLKLVETYIS--IIRGTPLLVQL 78

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +   +  P +G F             +  I  S    A+ +E +R+ +++VP+GQ E
Sbjct: 79  VIVF---YGLPSVGIF--------IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWE 127

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A  ++G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N
Sbjct: 128 AGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETAN 187

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +T   + + +    +Y     ++ L    L  +    
Sbjct: 188 RTYDFLPVYIEAALVYWCFCKVLFLIQAHLEKRFDRY 224


>gi|229010279|ref|ZP_04167488.1| Amino acid ABC transporter [Bacillus mycoides DSM 2048]
 gi|229131789|ref|ZP_04260663.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST196]
 gi|229165791|ref|ZP_04293559.1| Amino acid ABC transporter [Bacillus cereus AH621]
 gi|228617792|gb|EEK74849.1| Amino acid ABC transporter [Bacillus cereus AH621]
 gi|228651683|gb|EEL07646.1| Amino acid ABC transporter [Bacillus cereus BDRD-ST196]
 gi|228750974|gb|EEM00791.1| Amino acid ABC transporter [Bacillus mycoides DSM 2048]
          Length = 207

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 7   FTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 62

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 63  --YGLPTLN--------IEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 112

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 113 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 172

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY  +  ++++    L  +
Sbjct: 173 LIVYFEAGLIYWVICFLLSIVQQILEKR 200



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 6   VFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 65

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 66  PTLNIEVEPYTAAVIGFSLN 85


>gi|257876942|ref|ZP_05656595.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257811108|gb|EEV39928.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 493

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 107/230 (46%), Gaps = 18/230 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        ++    T+       +F  + G +L+       +    K  K +  +YI  
Sbjct: 282 FWEKYLPFYITGTGYTIFLALVGVLFGSIGGSLLAFM-----KLSKSKALKVIAAVYIE- 335

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV I + Y           F          +  +  IAL+  +AA++AEI+R
Sbjct: 336 -YVRGTPLLVQIFIVY-----------FGTGVLGLELSKLAAGCIALALNSAAYVAEIIR 383

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AV +GQ+EAA +LG+   +A R ++ PQA+++I+P L ++++ ++K SS+   +G 
Sbjct: 384 AGINAVNKGQLEAARSLGMNQIQAMRFIIFPQAIKNILPALGNEFVTVIKESSVVSVIGV 443

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++L+   G +   + +     +I   IY  L+  ++  +     ++   +
Sbjct: 444 SELIFQTGVVQGASFKPFLPYVIVSLIYFVLTFALSRLLGVAERRMKTSD 493



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T +LA  G++  +I G+L+   +LS +K +  I  VY+E  R  P LV 
Sbjct: 286 YLPFYITGTGYTIFLALVGVLFGSIGGSLLAFMKLSKSKALKVIAAVYIEYVRGTPLLVQ 345

Query: 145 IFFLYKSV 152
           IF +Y   
Sbjct: 346 IFIVYFGT 353


>gi|12056613|gb|AAG47970.1| mimosine transporter permease [Rhizobium sp. TAL1145]
          Length = 234

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 14/214 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--- 246
             F+ ++G++++L     S+         +       +   G P LV + L Y L     
Sbjct: 1   MFFASIIGMIVALMMLSPSKMLSVPAAAFI-------WWFRGTPALVQLILWYNLSLIFK 53

Query: 247 ----DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P LG    I  +TV    ++  +ALS + A ++AEI+R+GL +V RGQ EAA+ 
Sbjct: 54  DITLWLPGLGTVFSIPTNTVMTPLVAAVVALSLHEAGYMAEIIRNGLKSVNRGQTEAALC 113

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+      R +++PQAMR IIPP  ++ +NLLK +SL   +   DL+     I  +T +
Sbjct: 114 LGMKPSLLLRRIVIPQAMRVIIPPTGNETINLLKTTSLVSIIAVGDLLYSAQAIYARTFE 173

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I ++L+  F YL +  ++ +    L    +  E
Sbjct: 174 TIPLLLVATFWYLVVVSIMTIGQGYLERHYSRDE 207



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           M  A+IIG +V    LS +K+++     ++  FR  P LV +   Y   L
Sbjct: 1   MFFASIIGMIVALMMLSPSKMLSVPAAAFIWWFRGTPALVQLILWYNLSL 50


>gi|298369020|ref|ZP_06980338.1| L-cystine ABC transporter, permease protein [Neisseria sp. oral
           taxon 014 str. F0314]
 gi|298283023|gb|EFI24510.1| L-cystine ABC transporter, permease protein [Neisseria sp. oral
           taxon 014 str. F0314]
          Length = 238

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 13/217 (5%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
             +++      F+   V+ I ++L     S     KT   L   YIS  +I G P LV +
Sbjct: 32  FMVSLPLAVASFLIGMVIAIAVALVRIMPSGGIVRKTLLKLVETYIS--IIRGTPLLVQL 89

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + +   +  P +G F             +  I  S    A+ +E +R+ +++VP+GQ E
Sbjct: 90  VIVF---YGLPSVGIF--------IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWE 138

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A  ++G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N
Sbjct: 139 AGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETAN 198

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +T   + + +    +Y     ++ L   RL  +    
Sbjct: 199 RTYDFLPVYIEAALVYWCFCKVLFLIQARLENRFDRY 235


>gi|160934032|ref|ZP_02081419.1| hypothetical protein CLOLEP_02894 [Clostridium leptum DSM 753]
 gi|156866705|gb|EDO60077.1| hypothetical protein CLOLEP_02894 [Clostridium leptum DSM 753]
          Length = 244

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 115/227 (50%), Gaps = 14/227 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+  +    V    LG+++++       +      K +  LY++  +I G
Sbjct: 32  YVFYLTGLGNTLLISLMAVVIGITLGVLIAVVVNAAKANPRLNWAKKICSLYVT--VIRG 89

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P ++ + + Y + F             S   P+ +   +A    +AA+I+EI+RSG+ +
Sbjct: 90  TPVVLQLMIIYYIIF------------RSVQIPQIVVGGLAFGLNSAAYISEIIRSGIES 137

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQMEAA +LGL+  KA RL++LPQA+++I+P L ++++ L+K +S+A  +G  DL  
Sbjct: 138 IDRGQMEAARSLGLSRGKAMRLIILPQAVKNILPALGNEFVTLVKETSVAGYIGLRDLTK 197

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               + ++T      +++   +YL + + +   +     ++A  + +
Sbjct: 198 ASDIVASRTYDYFVPLILAACVYLVIVLGLTKLVRMFERRLAQSDYR 244



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 5/94 (5%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVA 126
           I   +       +     L G  NT  ++   ++    +G L+     +           
Sbjct: 18  IADSVYKSIVADNRYVFYLTGLGNTLLISLMAVVIGITLGVLIAVVVNAAKANPRLNWAK 77

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
            IC +YV V R  P ++ +  +Y  +   + IP 
Sbjct: 78  KICSLYVTVIRGTPVVLQLMIIYYIIFRSVQIPQ 111


>gi|329939723|ref|ZP_08289024.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces griseoaurantiacus M045]
 gi|329301293|gb|EGG45188.1| putative arginine/ornithine ABC transporter permease protein
           [Streptomyces griseoaurantiacus M045]
          Length = 308

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 3/194 (1%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSP 264
            + R         +   Y+  F   G P LV + L Y +    P+L   F     + V  
Sbjct: 90  AVMRMSSNPVTSTVAWFYVWFF--RGTPVLVQLLLWYNIALIFPILNLGFYKDEMNQVMT 147

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F++  + L    AA+++EIVR+G+ +V  GQ EA+ ALG+T  K  R V+LPQAMR I+
Sbjct: 148 PFLAALLGLGLNEAAYMSEIVRAGIQSVDMGQTEASHALGMTQGKTLRRVVLPQAMRVIV 207

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP  ++++N+LK SSLA AV F +L+     I + +   +E+  +    YL L+ + ++ 
Sbjct: 208 PPTGNEFINMLKTSSLAYAVQFNELIKRSTDISSTSLAVVELYFVASIWYLILTSVFSVG 267

Query: 385 MNRLNAKIALKEKK 398
              L  + A    +
Sbjct: 268 QYYLERRYARGSSR 281



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 69  GFEIDQGIVPYTSDSSYAT--AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           G       + Y     Y T   IL G  +T +++   M+   ++G ++   R+S+N + +
Sbjct: 42  GIAFSNAKIHYDVIPDYLTDGTILSGVWHTLYISVLAMLLGLVLGVVLAVMRMSSNPVTS 101

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            +   YV  FR  P LV +   Y   L    
Sbjct: 102 TVAWFYVWFFRGTPVLVQLLLWYNIALIFPI 132


>gi|206900671|ref|YP_002250772.1| glutamine ABC transporter, permease protein [Dictyoglomus
           thermophilum H-6-12]
 gi|206739774|gb|ACI18832.1| glutamine ABC transporter, permease protein [Dictyoglomus
           thermophilum H-6-12]
          Length = 218

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    + +         ++ V S   GI+L LF   L+R       +    +Y+
Sbjct: 1   MDFNLSIFIESIPYLLKGAVVTLRLSVVSVFFGIILGLFLG-LARISKNYFLRIPSTIYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P L+ + + Y        L  F    G+       +  + LS  +AA+  EI
Sbjct: 60  E--VIRGTPLLMQLLIIYY------ALPSFGINLGAI-----TAAIVGLSLNSAAYTGEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+ ++ +GQMEAA +LG+T+ +A R V+LPQA R I+PPLT++++++LK SSLA  +
Sbjct: 107 FRSGIQSIEKGQMEAARSLGMTYFQAMRYVILPQAFRRILPPLTNEFVSMLKESSLASTL 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+  G  I+          L    IYL +++ +      L  ++   +
Sbjct: 167 AVTELLRAGREIVAWKANVFSPFLGVTLIYLLMTLPLTRLSVWLEKRLKTGD 218



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 37/85 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+   +    I+G  +G  R+S N  +     +YVEV R  P L+ +  
Sbjct: 14  YLLKGAVVTLRLSVVSVFFGIILGLFLGLARISKNYFLRIPSTIYVEVIRGTPLLMQLLI 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y ++ S             G+ LN
Sbjct: 74  IYYALPSFGINLGAITAAIVGLSLN 98


>gi|148273811|ref|YP_001223372.1| putative polar amino acid ABC transporterpermease [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831741|emb|CAN02710.1| putative polar amino acid ABC transporter,permease component
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
          Length = 221

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 16/230 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               + +   L+  T+       +  F+  L I L L   RL   +  +    +   YIS
Sbjct: 5   WDLFWSSFGPLALETIRGTIPLALVTFALGLAIALGLALMRL---YGNRLVSGIARFYIS 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             ++ G P LV + + +                   V P + S  IALS     + AEI+
Sbjct: 62  --VVRGTPLLVQLFVIFY-----------GLPSIGVVLPPWPSAVIALSVNVGGYAAEII 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+ +++VPRGQ EA   +G++     R +++PQA R  +PPL++ +++L+K++SLA  + 
Sbjct: 109 RASILSVPRGQWEAGHTIGMSRALTLRRIIVPQAARVSVPPLSNTFISLVKDTSLASVIL 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +L      I + T + + + L    IY  + ++++    RL  ++   
Sbjct: 169 VTELFKQAQLIASSTFEYMLLYLEAALIYWLVCLVLSFAQTRLERRLDRY 218



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SS+    L     T  LA         I   +   RL  N+LV+ I R Y+ V R  P L
Sbjct: 10  SSFGPLALETIRGTIPLALVTFALGLAIALGLALMRLYGNRLVSGIARFYISVVRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S+  +          + +N
Sbjct: 70  VQLFVIFYGLPSIGVVLPPWPSAVIALSVN 99


>gi|59800817|ref|YP_207529.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|194098108|ref|YP_002001156.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae NCCP11945]
 gi|239998564|ref|ZP_04718488.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 35/02]
 gi|240013689|ref|ZP_04720602.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae DGI18]
 gi|240016129|ref|ZP_04722669.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae FA6140]
 gi|240080271|ref|ZP_04724814.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae FA19]
 gi|240112483|ref|ZP_04726973.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae MS11]
 gi|240115223|ref|ZP_04729285.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID18]
 gi|240120758|ref|ZP_04733720.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID24-1]
 gi|240123064|ref|ZP_04736020.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID332]
 gi|240125316|ref|ZP_04738202.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-92-679]
 gi|240127768|ref|ZP_04740429.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-93-1035]
 gi|254493285|ref|ZP_05106456.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 1291]
 gi|260440959|ref|ZP_05794775.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae DGI2]
 gi|268594423|ref|ZP_06128590.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 35/02]
 gi|268596420|ref|ZP_06130587.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae FA19]
 gi|268598550|ref|ZP_06132717.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae MS11]
 gi|268600903|ref|ZP_06135070.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID18]
 gi|268681690|ref|ZP_06148552.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID332]
 gi|268683917|ref|ZP_06150779.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-92-679]
 gi|268686160|ref|ZP_06153022.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-93-1035]
 gi|291044287|ref|ZP_06569996.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae DGI2]
 gi|293399479|ref|ZP_06643632.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|59717712|gb|AAW89117.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|193933398|gb|ACF29222.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae NCCP11945]
 gi|226512325|gb|EEH61670.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 1291]
 gi|268547812|gb|EEZ43230.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae 35/02]
 gi|268550208|gb|EEZ45227.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae FA19]
 gi|268582681|gb|EEZ47357.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae MS11]
 gi|268585034|gb|EEZ49710.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID18]
 gi|268621974|gb|EEZ54374.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID332]
 gi|268624201|gb|EEZ56601.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-92-679]
 gi|268626444|gb|EEZ58844.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae SK-93-1035]
 gi|291011181|gb|EFE03177.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae DGI2]
 gi|291610048|gb|EFF39170.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|317163839|gb|ADV07380.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 238

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 105/248 (42%), Gaps = 13/248 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           ++ + L+ LP    +              +  T+++      FV   ++ + ++L     
Sbjct: 1   MFNNFLASLPFMTETRADMLISAFWPMVKAGFTVSLPLAIASFVIGMIIAVAVALVRIMP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           S    +K    L   YIS  ++ G P LV + + +                         
Sbjct: 61  SGGIFQKCLLKLVEFYIS--VVRGTPLLVQLVIVFY-----------GLPSVGIYINPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL
Sbjct: 108 AAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +++++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   R
Sbjct: 168 SNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQAR 227

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 228 LEKRFDRY 235


>gi|295698937|ref|YP_003606830.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438150|gb|ADG17319.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 602

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 11/260 (4%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +  +   + SVL  P     +    FL+   LS    T+   A    F F LG+ ++L  
Sbjct: 44  VLLIGIVLESVLGNPRWGWNVFAEWFLSEPVLSGLGRTLLLTALGAAFGFALGVPIAL-- 101

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNF-IG 258
              +R             ++  F    L  L+LI      L   +H   P        + 
Sbjct: 102 ---ARVSRSPLLAGCAWAFVWLFRSIPLIVLLLILNNLGYLYETVHLGLPFTSVVVLDVP 158

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            + +   F++  + L+   AAF AE++R G+ +V  GQ+EAA ALGL   +  R ++LPQ
Sbjct: 159 TTELISPFLAAVLGLTLNHAAFSAEVIRGGIQSVDHGQLEAAAALGLPRERQARRIVLPQ 218

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           AMR+I+P   +  + L K SS+   +   +L      I  +  + I ++++    YL + 
Sbjct: 219 AMRAIVPTAFNDLIALAKGSSMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWYLIIL 278

Query: 379 IMIALFMNRLNAKIALKEKK 398
            +++     +    +   K+
Sbjct: 279 TVLSAIQVYVERHFSRGVKR 298



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G      +G  +   R+S + L+A     +V +FR+IP       + 
Sbjct: 75  LSGLGRTLLLTALGAAFGFALGVPIALARVSRSPLLAGCAWAFVWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +   L  PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYETVHLGLPFTSVVVLDVPTTELISPFLAAVLGLTL 175


>gi|239940213|ref|ZP_04692150.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|239986701|ref|ZP_04707365.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
 gi|291443643|ref|ZP_06583033.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
 gi|291346590|gb|EFE73494.1| ABC transporter permease [Streptomyces roseosporus NRRL 15998]
          Length = 292

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 120/259 (46%), Gaps = 10/259 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    + V+  L  ++ SV+        + F  F     L    LT+   A + V  F L
Sbjct: 39  RWAAAVAVLVLLALAMDSVIRNDAFQWDVVFAYFATASVLRGLWLTLWLTAVVMVLGFAL 98

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G +L++      R       +A+   Y+  +L    P LV +   + +    P   Q   
Sbjct: 99  GALLAVL-----RLSGNPVLQAVSWGYV--WLYRSTPILVQLLFWFNIGALYP---QILG 148

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +   ++        I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL   +  R ++L
Sbjct: 149 VSTVSLLGPVAIAVIGLTLHEAAYAAEVVRGGILSVERGQIEAAQSLGLGPWRRFRRIVL 208

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQAMRSI+PP  +  +  LK +S+   +   DL+     + ++T Q I ++L+    Y +
Sbjct: 209 PQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYQVIPLLLVATIWYAA 268

Query: 377 LSIMIALFMNRLNAKIALK 395
           ++ ++++    +    A  
Sbjct: 269 VTTLLSIGQRYVERYYARG 287



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 34/79 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    M+    +G L+   RLS N ++  +   YV ++R+ P LV + F +
Sbjct: 78  LRGLWLTLWLTAVVMVLGFALGALLAVLRLSGNPVLQAVSWGYVWLYRSTPILVQLLFWF 137

Query: 150 KSVLSVLPIPDHSIVLPFG 168
                   I   S V   G
Sbjct: 138 NIGALYPQILGVSTVSLLG 156


>gi|251790579|ref|YP_003005300.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247539200|gb|ACT07821.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 281

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  I V S +  I+L++      R             Y+S F   G P LV + + Y  
Sbjct: 75  LSVVITVISMLFCILLAVITAA-GRLSSSAIAFGCATFYVSLF--RGTPLLVQVLIIY-- 129

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                            V   F S  IALS    A++AE +RSG++AVPRGQ EAA+ALG
Sbjct: 130 ---------LALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSGVLAVPRGQKEAAMALG 180

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+    T  V+ PQA+R IIPP  SQ+++++K+SSL   +G  +L  +  +    T   +
Sbjct: 181 LSRWVITTHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNFLAQSYGRSTYHYM 240

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E++     IY  LSI + L   RL  +    
Sbjct: 241 EMLTTAAVIYWLLSIGLELLQGRLERRFGRG 271



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 13/165 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G V +  +    M+   ++  +  AGRLS++ +       YV +FR  P LV +  +
Sbjct: 69  FIQGAVLSVVITVISMLFCILLAVITAAGRLSSSAIAFGCATFYVSLFRGTPLLVQVLII 128

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG---IVLSLFAT 205
           Y ++  V  +          + LN       T+         V +   G     ++L  +
Sbjct: 129 YLALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSG------VLAVPRGQKEAAMALGLS 182

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPT----LVLIALKYQLHF 246
           R     H    +AL ++       F        LV +   ++L+F
Sbjct: 183 RWVITTHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNF 227


>gi|269127883|ref|YP_003301253.1| polar amino acid ABC transporter inner membrane subunit
           [Thermomonospora curvata DSM 43183]
 gi|268312841|gb|ACY99215.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermomonospora curvata DSM 43183]
          Length = 303

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 11/270 (4%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN-----AK 188
           E  R +P      +   +V+ VL       +L    F  +    +               
Sbjct: 13  EAIRAVPVRHPGRWAGAAVVLVLAAMFVHFLLYNPAFNWSEQWKYLFSEPVLKGVRNTIW 72

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQ 243
           + V +   GI L +    L R       K    +Y+  F    L T +LI     AL   
Sbjct: 73  LTVAAMAGGIALGVVL-ALMRMSPNPLLKGAAFVYLWFFRGTPLYTQLLIWGAIGALIPT 131

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +    P   +F+      +    ++  + L    AA++AEIVR+G+++V  GQ EAA AL
Sbjct: 132 IGIGIPFGPEFHTWQTQKLINVALAAALGLILNEAAYMAEIVRAGILSVDPGQQEAASAL 191

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LPQAMR I+PP  ++ +++LKN+SL  AV +A+L     TI   T Q 
Sbjct: 192 GMSRMQTMRRIVLPQAMRVIVPPTGNETISMLKNTSLVAAVPYAELTFTAQTIYASTYQI 251

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I ++++    YL LS ++ +    L    +
Sbjct: 252 IPMLIMACLWYLFLSTLLMIGQYYLERHFS 281



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 38/112 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT WL  + M     +G ++   R+S N L+     VY+  FR  P    +    
Sbjct: 64  LKGVRNTIWLTVAAMAGGIALGVVLALMRMSPNPLLKGAAFVYLWFFRGTPLYTQLLIWG 123

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
                +  I       P       + L    L       +   +++  IV +
Sbjct: 124 AIGALIPTIGIGIPFGPEFHTWQTQKLINVALAAALGLILNEAAYMAEIVRA 175


>gi|228906126|ref|ZP_04070015.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL
           200]
 gi|228853535|gb|EEM98303.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL
           200]
          Length = 230

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VLG ++ L      R  + K   ++  +YI   +I G P +V IA+ Y  
Sbjct: 18  VTLQLTLTSLVLGSLIGLL-FAFFRISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V   F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG
Sbjct: 73  ----------FGITSVVVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G +I     Q +
Sbjct: 123 MPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I    YL L ++   F+N L  ++  KE
Sbjct: 183 DTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|170751306|ref|YP_001757566.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170657828|gb|ACB26883.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 226

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 14/209 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + +F LG+ L L  T L R F  +   AL  LY+  F   G P LV + + +    
Sbjct: 24  VPLTLIAFALGLALGL-GTALVRLFAPRPLAALAWLYVWIF--RGTPLLVQLFVIFY--- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          +   F +  I  +    A+ +EIVR+ + ++P+GQ EAA A G+T
Sbjct: 78  --------GLPSTGILIDAFPAAVIGFTLNVGAYTSEIVRAAIASIPKGQWEAAYATGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R  +LPQA R  +P L + ++ L+K++SLA A+   +L      I+  T + + +
Sbjct: 130 PVQALRRTILPQAARVAVPSLANSFIALVKDTSLAAAITVPELFQAAQRIVAVTYEPLIL 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +    IYL LS +++     L  ++   
Sbjct: 190 YIEVALIYLVLSTLLSWLQTLLERRLGRY 218



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +  G   T  L          +G      RL A + +A +  +YV +FR  P L
Sbjct: 10  QSLGPLLAAGLRFTVPLTLIAFALGLALGLGTALVRLFAPRPLAALAWLYVWIFRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S   + D       G  LN
Sbjct: 70  VQLFVIFYGLPSTGILIDAFPAAVIGFTLN 99


>gi|224541408|ref|ZP_03681947.1| hypothetical protein CATMIT_00570 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525654|gb|EEF94759.1| hypothetical protein CATMIT_00570 [Catenibacterium mitsuokai DSM
           15897]
          Length = 242

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 21/228 (9%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-------RLSRHFHEKTGKALPLLYI 224
                    +T+       +   VLG+V+            +    F ++ G+ +   Y+
Sbjct: 16  WPLFWYGIKMTIAFAVVGTLAGLVLGLVIGAIRCVPLDPLDKPVTRFFKQLGRFITGFYV 75

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P +V     Y L   KPVL   N          F +  + +S  TAA++AEI
Sbjct: 76  WVF--RGTPMMVQAVFLYYLF--KPVLNWNN----------FTAGMVIISINTAAYMAEI 121

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ ++  GQMEAA +LG+T+ +    ++ PQA+++  P L +Q++  +K+S +  A+
Sbjct: 122 IRSGIQSIDAGQMEAAKSLGMTNTQTMINIIFPQAIKNTFPSLGNQFIVNIKDSCMLNAI 181

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +L     ++     + IE+ L+   +YL L+ +    +N +  KI
Sbjct: 182 SVVELFFQAQSVAGTNMRYIEVYLVVAILYLILTTVATFVLNYIEKKI 229


>gi|209516862|ref|ZP_03265712.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502678|gb|EEA02684.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 600

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 11/260 (4%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +  +   + SVL  P     +    FL+   LS    T+   A    F F LGI ++L  
Sbjct: 44  VALIGIVLESVLGNPRWGWNVFAEWFLSEPVLSGLGRTLLLTALGAAFGFALGIPIAL-- 101

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQFNF-IG 258
              +R             ++  F    L  L+LI      L   +H   P        + 
Sbjct: 102 ---ARVSRSPLLAGCAWAFVWLFRSIPLIVLLLILNNLGYLYETVHLGVPFTSIVVLEVP 158

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            + +   F++  + L+   AAF AE++R G+ +V  GQ+EAA ALGL   +    ++LPQ
Sbjct: 159 TTELISPFLAAVLGLTLNHAAFSAEVIRGGIQSVDHGQLEAAAALGLPRERQAWRIVLPQ 218

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           AMR+I+P   +  + L K SS+   +   +L      I  +  + I ++++    YL + 
Sbjct: 219 AMRAILPTAFNDLIALAKGSSMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWYLIIL 278

Query: 379 IMIALFMNRLNAKIALKEKK 398
            +++     +    +   K+
Sbjct: 279 TVLSAIQVYVERHFSRGVKR 298



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G      +G  +   R+S + L+A     +V +FR+IP       + 
Sbjct: 75  LSGLGRTLLLTALGAAFGFALGIPIALARVSRSPLLAGCAWAFVWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +   L  PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYETVHLGVPFTSIVVLEVPTTELISPFLAAVLGLTL 175


>gi|152968094|ref|YP_001363878.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
 gi|151362611|gb|ABS05614.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
          Length = 222

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 14/210 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF +G+V++L    L R       + +   Y+S  +I G P LV + L Y      
Sbjct: 27  LTIASFAIGMVIALVV-ALMRLSSVLVLQGIARFYVS--VIRGTPLLVQLFLIYY----- 78

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             L +F           F S  +A S     + +E+VR+ +++VPRGQ EAA+ +G+ + 
Sbjct: 79  -ALPEFG-----ATWDPFPSAVVAFSLNVGGYASEVVRAAILSVPRGQTEAALTIGMNYP 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R ++LPQA R  +PPL++  ++L+K++SLA ++   +L+     I   T +   +  
Sbjct: 133 TTMRRIVLPQAARVAVPPLSNTLISLVKDTSLASSIQVVELLRKASEIAAPTYEFFALYS 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y  + ++++    R+  ++     +
Sbjct: 193 LAAVYYWIVCLVLSFGQTRVETRLNRHVAR 222



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L  +      +I  +V   RLS+  ++  I R YV V R  P LV +F +Y ++   
Sbjct: 24  TIPLTIASFAIGMVIALVVALMRLSSVLVLQGIARFYVSVIRGTPLLVQLFLIYYALPEF 83


>gi|206967600|ref|ZP_03228556.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus AH1134]
 gi|229188623|ref|ZP_04315662.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 10876]
 gi|206736520|gb|EDZ53667.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus AH1134]
 gi|228594812|gb|EEK52592.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 10876]
          Length = 230

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VLG ++ L      R  + K   ++  +YI   +I G P +V IA+ Y  
Sbjct: 18  VTLQLTLTSLVLGSLIGLL-FAFFRISNNKVLNSIAHIYI--AIIRGTPLIVQIAILY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V   F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG
Sbjct: 73  ----------FGITSVIVFSPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G +I     Q +
Sbjct: 123 MPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I    YL L ++   F+N L  ++  KE
Sbjct: 183 DTYIIVGVYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  +Y+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHIYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVIVFSPFWAGAIALAIHNGAYI 99


>gi|238563299|ref|ZP_00439085.2| cystine ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|251768162|ref|ZP_02269699.2| cystine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|254199868|ref|ZP_04906234.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei FMH]
 gi|147749464|gb|EDK56538.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei FMH]
 gi|238520964|gb|EEP84419.1| cystine ABC transporter, permease protein [Burkholderia mallei GB8
           horse 4]
 gi|243060612|gb|EES42798.1| cystine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
          Length = 240

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 20/260 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +PPL +      ++    P+      L          L    LT+       +F  V  +
Sbjct: 1   MPPLALRARFMIALSRTPPLHMPITSLLAQSLP--VLLQGALLTVKFAVLSMLFGLVGAV 58

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L     SR         L   Y+S  ++ G P LV I + Y   +  P L       
Sbjct: 59  ALALMGIGRSR-----VLAGLARAYVS--VMRGTPLLVQIFVVY---YGLPSL------- 101

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G ++ P   +  IALS   AA+++E +R  +  + +GQ  AA +LGL+ R+  R V+ PQ
Sbjct: 102 GVSLDPT-PAGVIALSANVAAYMSESMRGAINGIDKGQWLAAYSLGLSWRQTLRYVIGPQ 160

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  +P L++  ++L+K++SL   +   +L+     II  T Q + + L    +Y  L 
Sbjct: 161 ALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPLYLAAAAVYWVLC 220

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++         ++AL  + 
Sbjct: 221 QILEWVQRWYERRLALPSRH 240



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   +    +    +  ++++A + R YV V R  P LV IF 
Sbjct: 34  VLLQGALLTVKFAVLSMLFGLVGAVALALMGIGRSRVLAGLARAYVSVMRGTPLLVQIFV 93

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 94  VYYGLPSL 101


>gi|315641164|ref|ZP_07896242.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus italicus DSM 15952]
 gi|315483088|gb|EFU73606.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Enterococcus italicus DSM 15952]
          Length = 231

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 7/231 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F     +  LS   +TM  +    VF  V G++L+L      +       K +   
Sbjct: 1   MDYSFLKEYYSYFLSGSVITMMISVVTIVFGTVFGVILALM-----KRSSIAPLKWVAST 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+ F   G P LV I +   L      L                   +ALS  + A++A
Sbjct: 56  YIAVF--RGTPMLVQILIANGLFHQVVTLPPVTIGVLQIDFSRLFPGILALSLNSGAYVA 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ AV  GQ EAA +LG+   +  R ++ PQA+R+I+P L ++++ L+K+SSL  
Sbjct: 114 EIVRGGINAVNSGQFEAARSLGMNGTQTMRYIIFPQALRNILPSLGNEFIVLIKDSSLLS 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +G  +L++    +I  +   ++ + +   +Y  ++ + +  +     K+ 
Sbjct: 174 TLGIYELMNSAQIVITSSFIPLKPLYVAAVLYFFMTFVTSQLLKLWENKLG 224



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 37/84 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y+    Y +  L G V T  ++   ++  T+ G ++   + S+   + W+   Y+ VF
Sbjct: 1   MDYSFLKEYYSYFLSGSVITMMISVVTIVFGTVFGVILALMKRSSIAPLKWVASTYIAVF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R  P LV I         V+ +P 
Sbjct: 61  RGTPMLVQILIANGLFHQVVTLPP 84


>gi|229171632|ref|ZP_04299207.1| Amino acid ABC transporter [Bacillus cereus MM3]
 gi|228611778|gb|EEK69025.1| Amino acid ABC transporter [Bacillus cereus MM3]
          Length = 207

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 107/208 (51%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +F++GI+L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 7   FTTIPLTLITFIIGIILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 62

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  I  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 63  --YGLPTLN--------IEVEPYTAAVIGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 112

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 113 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 172

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY ++  ++++    L  +
Sbjct: 173 LIVYFEAGLIYWAICFLLSIVQQILEKR 200



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 6   VFTTIPLTLITFIIGIILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 65

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 66  PTLNIEVEPYTAAVIGFSLN 85


>gi|46579648|ref|YP_010456.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46449063|gb|AAS95715.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
          Length = 256

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 115/229 (50%), Gaps = 15/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
               R L F    +    ++ VFS +  I + L    L R    +    +   Y+   ++
Sbjct: 43  DPYWRLLQFLPDGILVTFQVTVFSIICSIPIGLITG-LGRLSRNRGINLVASTYVE--VV 99

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV +   Y              +G     P+ ++  IALS    A++ E+ R+G+
Sbjct: 100 RGIPLLVQLFYIYY------------ALGRFLKVPDMLAAIIALSVCYGAYMGEVFRAGI 147

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EAA +LG    +   LV+LPQA R+I+PP+ ++++ +LK++SL   +  AD+
Sbjct: 148 EAIPKGQTEAARSLGFNRVETMFLVVLPQAWRTILPPVGNEFIAMLKDTSLVSIIAVADI 207

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  G    +++ Q  E   +   +YL ++++++  ++ + A++   +++
Sbjct: 208 LRRGREFASESFQYFETYTMIALVYLLITLLLSKGVSIMEARLNYYDRR 256



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 80  TSDSSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +    Y   +     G + TF +    +I +  IG + G GRLS N+ +  +   YVEV 
Sbjct: 40  SQPDPYWRLLQFLPDGILVTFQVTVFSIICSIPIGLITGLGRLSRNRGINLVASTYVEVV 99

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R IP LV +F++Y ++   L +PD
Sbjct: 100 RGIPLLVQLFYIYYALGRFLKVPD 123


>gi|300715818|ref|YP_003740621.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299061654|emb|CAX58770.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 324

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 98/194 (50%), Gaps = 10/194 (5%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--------GQFNFIGGSTVSP 264
            +  + L  LYI  F   G P LV +   Y +    P +          F     + +  
Sbjct: 103 NRLMRGLSGLYIWFF--RGTPLLVQLIFWYNMSTLFPKITLGIPFDGPIFASWNTNDLIT 160

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              +    L+   AA++AEI+R+GL +V  GQ+E   A G++  +A R +++PQAMRSII
Sbjct: 161 PLTAAIAGLALNEAAYMAEIIRAGLQSVDNGQVETTQAFGMSRARALRRIIIPQAMRSII 220

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP  +Q ++++K +SL   +   DL+    ++ N+T + I ++++ +  YL ++ ++ + 
Sbjct: 221 PPTGNQLISMIKATSLVSVIAMGDLLYSVQSVYNRTFEVIPMLMVAVIWYLFITSILNVG 280

Query: 385 MNRLNAKIALKEKK 398
            + +    +   ++
Sbjct: 281 QSFIERYYSRGVRR 294



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+  T++G L+   RLS N+L+  +  +Y+  FR  P LV + F Y
Sbjct: 71  LSGLKVTLGLTVVSMVLGTLLGLLLAVARLSDNRLMRGLSGLYIWFFRGTPLLVQLIFWY 130

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
                + P     I     +F +       T      A + +
Sbjct: 131 NMST-LFPKITLGIPFDGPIFASWNTNDLITPLTAAIAGLAL 171


>gi|240117510|ref|ZP_04731572.1| Amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID1]
 gi|268603209|ref|ZP_06137376.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID1]
 gi|268587340|gb|EEZ52016.1| amino acid permease integral membrane protein [Neisseria
           gonorrhoeae PID1]
          Length = 238

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 105/248 (42%), Gaps = 13/248 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           ++ + L+ LP    +              +  T+++      FV   ++ + ++L     
Sbjct: 1   MFNNFLASLPFMTETRADMLISAFWPMVKAGFTVSLPLAIASFVIGMIIAVAVALVRIMP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           S    +K    L   YIS  ++ G P LV + + +                         
Sbjct: 61  SGGIFQKCLLKLVEFYIS--VVRGTPLLVQLVIVFY-----------GLPSVGIYINPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL
Sbjct: 108 AAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +++++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   R
Sbjct: 168 SNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEVALVYWCFCKVLFLIQAR 227

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 228 LEKRFDRY 235


>gi|240168771|ref|ZP_04747430.1| ABC transporter permease protein GlnQ [Mycobacterium kansasii ATCC
           12478]
          Length = 599

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 16/241 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                          +     +     + V +  +G+ +   A  ++   H++  +    
Sbjct: 352 RDSFFDWDMYRQAIPALFHTGLPNTLILTVSASAIGLAIG-MALAVAGISHKRWLRWPAR 410

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y   F   GLP +V+I +          LG    +GG T +  +     AL     A++
Sbjct: 411 VYTDIF--RGLPEVVIILII--------GLGVGPIVGGLTNNNPYPLGIAALGLMAGAYV 460

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+RSG+ +V  GQ+EAA ALG ++  A RLV++PQ +R ++P L +Q++ LLK S+L 
Sbjct: 461 GEILRSGIQSVDPGQLEAARALGFSYSAAMRLVVVPQGIRRVLPALVNQFIALLKASALV 520

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G      +L  +G  +  QTG  +  ++     YL L+I +   +N ++AK+     
Sbjct: 521 YFLGLVAKQRELFQIGRDLNAQTGN-LSPLVAAGIFYLLLTIPLTHLVNYIDAKLRRGRA 579

Query: 398 K 398
           +
Sbjct: 580 R 580



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 12/154 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G  NT  L  S       IG  +    +S  + + W  RVY ++FR +P +V+I  +
Sbjct: 369 FHTGLPNTLILTVSASAIGLAIGMALAVAGISHKRWLRWPARVYTDIFRGLPEVVIILII 428

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG------------LSFPTLTMDTNAKIFVFSFVL 196
              V  ++    ++   P G+                  +          A+   FS+  
Sbjct: 429 GLGVGPIVGGLTNNNPYPLGIAALGLMAGAYVGEILRSGIQSVDPGQLEAARALGFSYSA 488

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            + L +    + R       + + LL  S  + F
Sbjct: 489 AMRLVVVPQGIRRVLPALVNQFIALLKASALVYF 522


>gi|325523728|gb|EGD01988.1| putative ABC transporter permease [Burkholderia sp. TJI49]
          Length = 255

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 8/243 (3%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                 I   F    +   L    LT+  +        VLG+V++L      R    +  
Sbjct: 1   MNFSWDIFSRFLWAPSPTYLHGLALTVVISLCAIALGAVLGLVVALM-----RSSSNRAL 55

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSC 275
           + L   Y+  +++ G P LV I   Y       V    +   G    P    +  +AL  
Sbjct: 56  QVLARGYV--WVMRGTPLLVQIVFLYTAFAAANVFRFHDLDFGWITLPGNIQAAVLALGM 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            +AA++AEI+R+GL +V RGQ EA+ +LG+      R ++LPQA+R I+PP+ ++   +L
Sbjct: 114 NSAAYMAEIIRAGLGSVDRGQYEASRSLGMPTMLLMRRIVLPQALRVIVPPMGNEVNVML 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           KN++L   +G  +L+     I +   +  E+ L+    +L L+ +      R+ A     
Sbjct: 174 KNTTLVSVIGVQELLLSTQMITSVNFRVFELYLVLAIYFLLLTTLWGFVQRRIEAHFGRG 233

Query: 396 EKK 398
           + +
Sbjct: 234 DAR 236



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  ++   +    ++G +V   R S+N+ +  + R YV V R  P LV I FL
Sbjct: 19  YLHGLALTVVISLCAIALGAVLGLVVALMRSSSNRALQVLARGYVWVMRGTPLLVQIVFL 78

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           Y +  +      H +   +
Sbjct: 79  YTAFAAANVFRFHDLDFGW 97


>gi|13473305|ref|NP_104872.1| amino acid ABC transporter (permease) [Mesorhizobium loti
           MAFF303099]
 gi|14024053|dbj|BAB50658.1| amino acid ABC transporter (permease) [Mesorhizobium loti
           MAFF303099]
          Length = 226

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SFVLG+ + L A  L R F  K    L   Y+  F   G P LV + 
Sbjct: 17  WAALIFTVPLTLSSFVLGLTVGLGA-ALGRLFGPKPLVMLVRFYVWIF--RGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  LIFY-----------GLPSVGILLDAFTAALIGFTLNIGAYTSEIIRAAIGSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G+T  +A R  +LPQA R  +PPL++ +++L+K++SLA A+   ++      I+  
Sbjct: 123 AYSIGMTWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    +YL++S +++    RL  ++   
Sbjct: 183 TYEPLILYVEAAILYLAMSSVLSALQTRLEERLNRY 218



 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +    + T  L  S  +    +G     GRL   K +  + R YV +FR  P LV +F +
Sbjct: 16  LWAALIFTVPLTLSSFVLGLTVGLGAALGRLFGPKPLVMLVRFYVWIFRGTPLLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + SV  + D       G  LN
Sbjct: 76  FYGLPSVGILLDAFTAALIGFTLN 99


>gi|269977205|ref|ZP_06184178.1| ABC-type amino acid transport system, permease component
           [Mobiluncus mulieris 28-1]
 gi|269934508|gb|EEZ91069.1| ABC-type amino acid transport system, permease component
           [Mobiluncus mulieris 28-1]
          Length = 302

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 6/261 (2%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           VFR    + V+      VL +  +  +       ++      +       T   + V + 
Sbjct: 13  VFRPGRLISVVLVAALVVLIINSLITNPNYHWDKVWEYLFHPTIIRGIGFT-LVLTVAAM 71

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +G+VL++    + R       K++   YI  F   G P    +     L    P +G  
Sbjct: 72  FIGVVLAV-TMAIMRQSPNPVLKSVAWFYIWFF--RGTPIYTQLIFWGLLPTLYPFVGVG 128

Query: 255 NF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            F I  + V     +  + L     A++AEIVR+GL +V  GQ EAA ALG+      R 
Sbjct: 129 VFKIDINVVWNVLWAAILGLGLNEGAYLAEIVRAGLNSVDPGQWEAATALGMKRSLIMRR 188

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMF 372
           ++LPQAMR I+PP  ++ +++LK +SL  AV F  +L      +  Q    + +++    
Sbjct: 189 IILPQAMRVIVPPTGNETISMLKTTSLVSAVPFTMELTFAAQALGRQIFMPVPMLISAAI 248

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
            YL ++ ++ +    L     
Sbjct: 249 WYLVVTSILMVGQFYLEKHFG 269



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 27/87 (31%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  L  + M    ++   +   R S N ++  +   Y+  FR  P    + F 
Sbjct: 56  IIRGIGFTLVLTVAAMFIGVVLAVTMAIMRQSPNPVLKSVAWFYIWFFRGTPIYTQLIFW 115

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG 175
                    +      +   +  N   
Sbjct: 116 GLLPTLYPFVGVGVFKIDINVVWNVLW 142


>gi|241758722|ref|ZP_04756835.1| L-cystine transport system permease protein TcyB [Neisseria
           flavescens SK114]
 gi|241320930|gb|EER57143.1| L-cystine transport system permease protein TcyB [Neisseria
           flavescens SK114]
          Length = 238

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 103/248 (41%), Gaps = 13/248 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +  + L+ LP    +              +   +++      FV   ++ + ++L     
Sbjct: 1   MLNNFLASLPFMTETRADMLISAFWPMVKAGFAVSLPLAIASFVIGMIIAVAVALVRIMP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           S    +K    L   YIS  +I G P LV + + +                         
Sbjct: 61  SGGIFQKCLLKLVEFYIS--VIRGTPLLVQLVIVFY-----------GLPSIGIYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E +R+ +++VP+GQ EA  ++G+T+ +  R ++ PQA R  +PPL
Sbjct: 108 AAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +++++ L KN+SLA  V   +L  V     N+T   + + +    +Y     ++ L   R
Sbjct: 168 SNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQAR 227

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 228 LEKRFDRY 235


>gi|113866077|ref|YP_724566.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113524853|emb|CAJ91198.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 222

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                       ++   + VLG V+ L           +   ++   Y++      L   
Sbjct: 12  WHDIVHGAVITVEVTACALVLGCVMGLLVGIGRLDPKRRVIYSICTAYVTFIRGTPLLV- 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                       +  L  F     + + P F+   I L  Y+ A+++EIVR  + +V +G
Sbjct: 71  ------------QLFLLFFGLPQFNILLPAFVCGVIGLGIYSGAYVSEIVRGAIQSVDKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G++  +A R V+LPQA+  +IPPL ++++ L+KNS+L   +  ADL+  G  
Sbjct: 119 QMEAARSIGMSSGQAMRAVILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQK 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           II+ + +++E+ L    +YL L+    L + R   ++ + 
Sbjct: 179 IISVSYRSLEVYLAIALVYLILTSAAGLILRRAEQRLRMG 218



 Score = 36.8 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEV 135
           + ++   +    I+ G V T  +    ++   ++G LVG GRL    +++  IC  YV  
Sbjct: 3   LDFSPVFAGWHDIVHGAVITVEVTACALVLGCVMGLLVGIGRLDPKRRVIYSICTAYVTF 62

Query: 136 FRNI 139
            R  
Sbjct: 63  IRGT 66


>gi|16119635|ref|NP_396341.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15162205|gb|AAK90782.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 284

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 8/256 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + I  L    L++               ++   L    LT++  A   V   ++G ++++
Sbjct: 30  IAILMLALMTLAIGRNQSVQWSEIPRYMIDPVILGGVILTLELTAGAMVAGIIIGCLVAV 89

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGST 261
            A            KA+ + ++  F   G+P +V I   + +    P +      +  + 
Sbjct: 90  MA-----TSQNIVLKAIAVAFVWWF--RGVPLIVQIFFWFNIALFVPEIGFGSWSVSVND 142

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +     + ++AL  + AA ++EI+RSGL AV RGQ EAA +LGL   +  R V+LPQA+R
Sbjct: 143 IVTPAFAGFLALGLHEAANMSEIIRSGLTAVDRGQREAASSLGLRPLQTLRTVVLPQAIR 202

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP  +Q + +LK S++   +G  DL++    I  +    IE++ +    YL ++ + 
Sbjct: 203 LIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYARNFLVIELLCVASLWYLGITTIA 262

Query: 382 ALFMNRLNAKIALKEK 397
           ++  + L  K+A K +
Sbjct: 263 SIGQHYLERKLAPKGR 278



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 35/78 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  L    M+   IIG LV     S N ++  I   +V  FR +P +V IFF
Sbjct: 61  VILGGVILTLELTAGAMVAGIIIGCLVAVMATSQNIVLKAIAVAFVWWFRGVPLIVQIFF 120

Query: 148 LYKSVLSVLPIPDHSIVL 165
            +   L V  I   S  +
Sbjct: 121 WFNIALFVPEIGFGSWSV 138


>gi|226314897|ref|YP_002774793.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226097847|dbj|BAH46289.1| probable amino acid ABC transporter permease protein [Brevibacillus
           brevis NBRC 100599]
          Length = 234

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 7/213 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +   + V G  L LF   L +   ++  +    +Y+  F   G P LV I L   
Sbjct: 28  MNTILLTAVATVCGTFLGLFI-SLGKMSSKRILRWTCSIYVELF--RGTPMLVQILL--- 81

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +HF            G++      S ++ALS   AA++AEI R+G+ ++  GQMEAA +L
Sbjct: 82  IHFAVIPSIWGILYPGASSPEAIYSGFVALSLNAAAYMAEIFRAGIQSIDPGQMEAARSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+    A R ++LPQA   ++P + ++++ LLK+SSL   +   +L      +   T + 
Sbjct: 142 GMNKGLAMRQIILPQAFTRMLPAIGNEFIALLKDSSLLAVIATPELNYAAMNVAKSTFER 201

Query: 364 IEIILIWMFIYLSLSIMIALFMNR-LNAKIALK 395
               L    +YL L++ ++  + R L  K + +
Sbjct: 202 YPPYLTEAAVYLVLTLFLSRIVVRGLEKKYSTR 234



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 41/78 (52%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            + ++    Y    + G +NT  L     +  T +G  +  G++S+ +++ W C +YVE+
Sbjct: 10  PLDWSVIYDYRELFIRGIMNTILLTAVATVCGTFLGLFISLGKMSSKRILRWTCSIYVEL 69

Query: 136 FRNIPPLVVIFFLYKSVL 153
           FR  P LV I  ++ +V+
Sbjct: 70  FRGTPMLVQILLIHFAVI 87


>gi|297531646|ref|YP_003672921.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. C56-T3]
 gi|297254898|gb|ADI28344.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. C56-T3]
          Length = 218

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 116/231 (50%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +      +    +     + +   + G++L LF   L +    +  +     YI
Sbjct: 1   MDFRFDIIVEYAPYFFQGLLATIGVSLAGIIFGLILGLFIG-LGKMSTNRLVRLPFSWYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F   G P +V I L   +HF    L               +SL ++LS  +AA++AEI
Sbjct: 60  NFF--RGTPLVVQILL---VHFGVMPLF-------FAQPNGIVSLAVSLSLNSAAYVAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP  ++++ L+K+SSL + +
Sbjct: 108 FRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +++  G     +  +  E  L   FIYL L++ ++   + L  K + +
Sbjct: 168 AAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSHYLERKYSTQ 218



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 76/194 (39%), Gaps = 3/194 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA     G + T  ++ +G+I   I+G  +G G++S N+LV      Y+  FR  P +V 
Sbjct: 11  YAPYFFQGLLATIGVSLAGIIFGLILGLFIGLGKMSTNRLVRLPFSWYINFFRGTPLVVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  ++  V+ +     + IV        N       +       I          L +  
Sbjct: 71  ILLVHFGVMPLFFAQPNGIVSLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTH 130

Query: 205 TRLSRH--FHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGST 261
            +  R+    +   + +P       ++    +L ++IA    +++ K   G++  +    
Sbjct: 131 AQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGEYYRVWEPY 190

Query: 262 VSPEFMSLYIALSC 275
           ++  F+ L + LS 
Sbjct: 191 LTVAFIYLILTLSL 204


>gi|172063350|ref|YP_001811001.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171995867|gb|ACB66785.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 594

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 1/243 (0%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           S+L  P     +    FL+   LS    T+       VF F LG  ++L     SR    
Sbjct: 53  SILGNPQWGWPVFAEWFLSPPVLSGLARTLLLTLLGAVFGFALGAFVALARLSRSRLLAA 112

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYIA 272
                + L      ++  L    L  L   +    P      F   +T +   F++  + 
Sbjct: 113 SAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLG 172

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR+I+P   +  +
Sbjct: 173 LTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMRAILPTAFNDLI 232

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L K +S+   +   +L      I  +  + I ++++    YL +  +++    ++    
Sbjct: 233 SLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSTIQVQVERHY 292

Query: 393 ALK 395
           A  
Sbjct: 293 ARG 295


>gi|330806944|ref|YP_004351406.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375052|gb|AEA66402.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 221

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 13/193 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +  +Y+S F   G P LV + + Y   +  P L              
Sbjct: 41  ALMRLSRFKLVNWIARIYVSFF--RGTPLLVQLFVIY---YGLPQL--------GIELDP 87

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I  S   AA+  EI+R+ + ++ RGQ EAA ++G+T  +  R  +LPQA R+ +P
Sbjct: 88  LPAALIGFSLNMAAYACEILRAAISSIERGQWEAAASIGMTRAQTLRRAILPQAARTALP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ +++   
Sbjct: 148 PLGNSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWVLASVLSHLQ 207

Query: 386 NRLNAKIALKEKK 398
           N L A++   +++
Sbjct: 208 NVLEARVNRHDQE 220



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L+  GM    ++G  +   RLS  KLV WI R+YV  FR  P LV +F +
Sbjct: 15  LLKGAYYTVFLSLGGMFFGLLLGFGLALMRLSRFKLVNWIARIYVSFFRGTPLLVQLFVI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G  LN 
Sbjct: 75  YYGLPQLGIELDPLPAALIGFSLNM 99


>gi|269962669|ref|ZP_06177014.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832592|gb|EEZ86706.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 246

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 29/259 (11%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV + FL                   G+      ++    T+  +    +F+  +G++++
Sbjct: 8   LVSLLFLTGCSDYQWGWYVLDPSTEQGLTNIKFLIAGFNDTIQVSLLSMLFAMTIGLIIA 67

Query: 202 LFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L A       +     + +  +++P+L +  ++ +G+PTL+ ++L +             
Sbjct: 68  LPALSDSPILKWINRVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH------------- 114

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                     F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+
Sbjct: 115 ----------FWAGIIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLNYWQKMRLVI 164

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      +EI    +  YL
Sbjct: 165 LPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYL 224

Query: 376 SLSIMIALFMNRLNAKIAL 394
            L ++++  +  L  +IA+
Sbjct: 225 VLILLVSQAVRWLEKRIAI 243



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 63  FLSERAGFEIDQGIVPYTSDS--SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
           FL+  + ++    ++  +++   +    ++ GF +T  ++   M+ A  IG ++    LS
Sbjct: 13  FLTGCSDYQWGWYVLDPSTEQGLTNIKFLIAGFNDTIQVSLLSMLFAMTIGLIIALPALS 72

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
            + ++ WI RVYVEV R+IP LV++ ++Y  + 
Sbjct: 73  DSPILKWINRVYVEVIRSIPVLVLLLWVYYGMP 105


>gi|325528178|gb|EGD05363.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 500

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 1/243 (0%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           S+   P     +    FL+   LS    T+       VF  VLG  ++L     SR    
Sbjct: 53  SLFANPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGLVLGAFVALARLSRSRLLAA 112

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIA 272
                + L      ++  L    L  L   +    P  G   F +  + +   F +  + 
Sbjct: 113 SAWTFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGLVWFDVPTTDLISPFAAAVLG 172

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR+I+P   +  +
Sbjct: 173 LTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTVRIVLPQAMRAILPTAFNDLI 232

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L K +S+   +   +L      I  +  + I ++++    YL +   ++    ++    
Sbjct: 233 SLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTALSAIQVQIERHY 292

Query: 393 ALK 395
           A  
Sbjct: 293 ARG 295



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +   ++G  V   RLS ++L+A     ++ +FR+IP       + 
Sbjct: 75  LSGLARTLVLTLLGAVFGLVLGAFVALARLSRSRLLAASAWTFIWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F        PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYEHVRLGVPFTGLVWFDVPTTDLISPFAAAVLGLTL 175


>gi|227820423|ref|YP_002824394.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339422|gb|ACP23641.1| probable amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 323

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 15/285 (5%)

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
              G+     L+A    V  +  R +P  + +  ++  + ++L +  +S  L F  F+  
Sbjct: 54  PSLGQFLGALLIALTAAVNWKALRQLPRHLQVVGVWIELFALLMLFFYSFDLSF-AFIAR 112

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           +     +  + T   I V S  +  +++L A  +++             Y S F      
Sbjct: 113 KIGFLVSQGVVTTLYISVISIAVATIIAL-AGAIAKLSKNGVIYGFATFYTSLFR----- 166

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L L+   Y ++   P +          V     +  +ALS    A++ EI R+G+ ++P
Sbjct: 167 GLPLLMQIYIIYLGLPQV--------GYVISAVPAGILALSLCYGAYMTEIFRAGIESIP 218

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ E A ALGL+  +   LV+LPQAMR IIPP  +Q++ +LK+SSL   VG  +L+ + 
Sbjct: 219 RGQTEGATALGLSPAQTMGLVILPQAMRVIIPPTGNQFIAMLKDSSLVSVVGVWELMYLA 278

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            T      + IE+++    IY  LS+ +    +R+ A+      +
Sbjct: 279 RTQGQTEFRHIEMLITASMIYWLLSVCLEFLQSRIEARFGRFNVR 323



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 17/98 (17%)

Query: 58  SLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG 117
            L   F++ + GF + Q                 G V T +++   +  ATII       
Sbjct: 104 DLSFAFIARKIGFLVSQ-----------------GVVTTLYISVISIAVATIIALAGAIA 146

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +LS N ++      Y  +FR +P L+ I+ +Y  +  V
Sbjct: 147 KLSKNGVIYGFATFYTSLFRGLPLLMQIYIIYLGLPQV 184


>gi|291612200|ref|YP_003541013.1| putative amino acid ABC transporter permease [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|224552833|gb|ACN55047.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. 'Ames Ancestor']
          Length = 269

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 19/255 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L          L      + + +    M      L    +T+       V   ++G++ +
Sbjct: 18  LCPTLCGAFHSLLKSIQYEVTHMFEIFMSTYPTLLKATIVTLQLTLTSLVLGSLIGLLFA 77

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
            F     R  + K   ++  +YI   +I G P +V IA+ Y              I    
Sbjct: 78  FF-----RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVV 118

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   F +  IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R
Sbjct: 119 VFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFR 178

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +PPL +Q++  LK+SSL   VG A+L   G +I     Q ++  +I    YL L ++ 
Sbjct: 179 QSLPPLGNQFIIGLKDSSLVAYVGMAELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLF 238

Query: 382 ALFMNRLNAKIALKE 396
              +N L  ++  KE
Sbjct: 239 TYLVNLLEKRLQRKE 253



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 51  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 110

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 111 YFGITSVVVFTPFWAGAIALAIHNGAYI 138


>gi|307130004|ref|YP_003882020.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306527533|gb|ADM97463.1| Amino acid ABC transporter, permease protein [Dickeya dadantii
           3937]
          Length = 281

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 71/223 (31%), Positives = 103/223 (46%), Gaps = 19/223 (8%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGL 232
             L+ D   +  V S V+ I+  LF   L+      R             Y+S F   G 
Sbjct: 62  MHLSPDGFIQGAVLSVVITIISMLFCILLAVITAAGRLSSSAIAFGCATFYVSLF--RGT 119

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + Y                   V   F S  IALS    A++AE +RSG++AV
Sbjct: 120 PLLVQVLIIY-----------LALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSGVLAV 168

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ EAA+ALGL+       V+ PQA+R IIPP  SQ+++++K+SSL   +G  +L  +
Sbjct: 169 PRGQKEAAMALGLSRWVIITHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNFL 228

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +    T   +E++     IY  LSI + L   RL    +  
Sbjct: 229 AQSYGRSTYHYMEMLTTAAVIYWLLSIGLELLQGRLERHFSRG 271



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 13/165 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G V +  +    M+   ++  +  AGRLS++ +       YV +FR  P LV +  +
Sbjct: 69  FIQGAVLSVVITIISMLFCILLAVITAAGRLSSSAIAFGCATFYVSLFRGTPLLVQVLII 128

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG---IVLSLFAT 205
           Y ++  V  +          + LN       T+         V +   G     ++L  +
Sbjct: 129 YLALPQVGIVMSAFTSGIIALSLNYGAYLAETIRSG------VLAVPRGQKEAAMALGLS 182

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPT----LVLIALKYQLHF 246
           R     H    +AL ++       F        LV +   ++L+F
Sbjct: 183 RWVIITHVVAPQALRIIIPPAGSQFISMIKDSSLVSLMGLWELNF 227


>gi|258405417|ref|YP_003198159.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257797644|gb|ACV68581.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 360

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 19/250 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + + +     P +       +           +T        + S V G++++L      
Sbjct: 125 FLASVEKAQKPWYIQFWQDTVRFTPALAKGAVMTFVLVVVTMLVSPVGGLLVAL-----G 179

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R         L   +I  F   G P L+ +   Y   +  P +       G T+SP   +
Sbjct: 180 RISTFPPLIGLCWFFIWIF--RGTPLLLQLFFIY---YGLPSM-------GVTLSPLVAA 227

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L        +A++AEI+R  + ++  GQMEAA ALG+T+ +A R V++PQ  + ++PP+ 
Sbjct: 228 LLGL-GLNYSAYLAEIIRGAIQSIDSGQMEAAKALGMTYGQAMRRVIIPQTYKRLMPPVG 286

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ L+K+++L   +   +L+     + N     I ++++   IYL  +    +   ++
Sbjct: 287 NEFIALIKDTALVSTIAMVELMRAADQLFNTYFD-ITVLVLAAIIYLLFTSAFTVTFEKI 345

Query: 389 NAKIALKEKK 398
             ++   E +
Sbjct: 346 EKRVGAYENR 355



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 44/95 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     +  A+  G V TF L    M+ + + G LV  GR+S    +  +C  ++ +FR 
Sbjct: 141 WQDTVRFTPALAKGAVMTFVLVVVTMLVSPVGGLLVALGRISTFPPLIGLCWFFIWIFRG 200

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            P L+ +FF+Y  + S+       +    G+ LN 
Sbjct: 201 TPLLLQLFFIYYGLPSMGVTLSPLVAALLGLGLNY 235


>gi|167628304|ref|YP_001678803.1| glutamine abc transporter, glutamine-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
 gi|167591044|gb|ABZ82792.1| glutamine abc transporter, glutamine-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
          Length = 217

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 18/234 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  +    +  S   +T++      + S V+G+ +++      R    K   A  +
Sbjct: 1   MEQWNDLLAYGPQFFSGLKVTIEVTLYSLLLSMVIGVAIAIL-----RVSGFKVLNAFGV 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F     P L+ +   Y   F  P +              F    I L+ YT A+I
Sbjct: 56  AYVEFF--QNTPLLIQVFFIY---FGTPAM--------GIKLSGFACGTIGLAMYTGAYI 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E+ R+G+ AVP+GQMEAA + G+ + +A   V+LPQA++ I+PPLT+Q +N++KNS++ 
Sbjct: 103 GEVFRAGIQAVPKGQMEAARSSGMNYLQAMGYVVLPQAVKIILPPLTNQVVNMVKNSAIL 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +  ADL+     I ++T    E+ +    +YL +++ ++   N L  ++   
Sbjct: 163 STIVVADLMYETYRIASETFIIFEVFIFAALLYLVITVPLSTVANLLEQRLRRS 216



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 37/103 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G   T  +    ++ + +IG  +   R+S  K++      YVE F+N P L+ 
Sbjct: 10  YGPQFFSGLKVTIEVTLYSLLLSMVIGVAIAILRVSGFKVLNAFGVAYVEFFQNTPLLIQ 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +FF+Y    ++            G+ +               A
Sbjct: 70  VFFIYFGTPAMGIKLSGFACGTIGLAMYTGAYIGEVFRAGIQA 112


>gi|323526241|ref|YP_004228394.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383243|gb|ADX55334.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 219

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 18/212 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F  + G VL+L         H +T   L  +Y+S  ++ G P LV I + Y    
Sbjct: 26  VLSMFFGLIAGAVLALMG-----VSHSRTLNWLARVYVS--VMRGTPLLVQIFVIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IALS   AA+++E +R  ++ + +GQ  AA +LGL+
Sbjct: 76  --------GLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + +
Sbjct: 128 RRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPL 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +Y  L  ++ L       ++AL  + 
Sbjct: 188 YLAAAAVYWVLCQILELLQRWYERRLALPSRH 219



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 32/70 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A   M    I G ++    +S ++ + W+ RVYV V R  P LV IF 
Sbjct: 13  VLAQGAVLTVKFAVLSMFFGLIAGAVLALMGVSHSRTLNWLARVYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  + S   
Sbjct: 73  IYYGLPSFGI 82


>gi|325068922|ref|ZP_08127595.1| polar amino acid ABC transporter inner membrane subunit
           [Actinomyces oris K20]
          Length = 321

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 7/215 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----A 239
               +   +  +GIVL++  T + R       + + L Y+  F    + T ++      A
Sbjct: 69  WTLLLTFMAMAIGIVLAV-TTAILRQSSNPVLRWVALAYLWFFRGTPIYTQLVFWGALSA 127

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L  +L    P   +      +TV   F++  + L     A+++EIVRSGL +V +GQ EA
Sbjct: 128 LYQKLSLGIPFGPELLTFKTTTVFTPFVAAVLGLGINEGAYLSEIVRSGLNSVDKGQSEA 187

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIIN 358
           A ALG++  +  R ++LPQAMR I+PP  ++ +++LK +SL +AV F  DL  V  +  +
Sbjct: 188 AGALGMSRGQILRRIVLPQAMRVIVPPTGNETISMLKTTSLVLAVPFTLDLTFVTNSYAS 247

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            T Q I ++L+    Y+ ++ ++ +  + +     
Sbjct: 248 LTYQIIPLLLVAAIWYIIITSILMVGQHYIERYYG 282



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 7/107 (6%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           +     T  L F  M    ++       R S+N ++ W+   Y+  FR  P    + F  
Sbjct: 64  VKAVGWTLLLTFMAMAIGIVLAVTTAILRQSSNPVLRWVALAYLWFFRGTPIYTQLVFWG 123

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                          L  G+      L+F T T+ T     V    +
Sbjct: 124 ALSALYQK-------LSLGIPFGPELLTFKTTTVFTPFVAAVLGLGI 163


>gi|328881416|emb|CCA54655.1| ABC transporter permease [Streptomyces venezuelae ATCC 10712]
          Length = 282

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 10/226 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L    LT+   A +    F LG +L++      R       +A+   Y+  F  
Sbjct: 62  FTSASVLRGLGLTLWLTALVMALGFALGTLLAVL-----RLSANPVLRAVSWGYVWFF-- 114

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P LV +   + +    P +   N +    +        I L+ + AA+ AE+VR G+
Sbjct: 115 RSTPILVQLLFWFNIGALYPQILGVNTV---NLLGPVSVAVIGLTLHEAAYAAEVVRGGI 171

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V RGQ+EAA +LGL   +    ++LPQAMR+I+PP  +  +  LK +S+   +   DL
Sbjct: 172 LSVDRGQIEAAQSLGLGRWRRLSRIVLPQAMRAIVPPAGNMLIGTLKGTSIVSVIAVQDL 231

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +     + ++T + I ++L+    Y++++ +++L    +    A  
Sbjct: 232 LYSTQLVYHRTYEIIPLLLVATLWYVAVTSVLSLGQYYVERHYARG 277



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 34/79 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    M     +GTL+   RLSAN ++  +   YV  FR+ P LV + F +
Sbjct: 68  LRGLGLTLWLTALVMALGFALGTLLAVLRLSANPVLRAVSWGYVWFFRSTPILVQLLFWF 127

Query: 150 KSVLSVLPIPDHSIVLPFG 168
                   I   + V   G
Sbjct: 128 NIGALYPQILGVNTVNLLG 146


>gi|301301313|ref|ZP_07207463.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851087|gb|EFK78821.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 485

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 13/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ V   +   +  +    L      K  + +    I  F   GLP LVL    Y    
Sbjct: 291 LKLTVVGIIGATIFGILIGMLG-VVPNKFAQGISTTIIYIF--RGLPLLVLALFIYN--- 344

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L         +  P F++  I L+    A+ A  V+ G+ AV +GQMEAA +LGL+
Sbjct: 345 GIPSLTG-------SKIPAFIAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLS 397

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K+ R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L   G  II +  +   I
Sbjct: 398 FGKSMRKVILPQGVKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFRI 457

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             I   +YL +  ++ L    +  +I
Sbjct: 458 WGIIAIMYLLIITILTLLSKWIERRI 483



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A L G V T  L   G+I ATI G L+G   +  NK    I    + +FR +P LV+  
Sbjct: 281 KAFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLAL 340

Query: 147 FLYKSVLSV 155
           F+Y  + S+
Sbjct: 341 FIYNGIPSL 349


>gi|121593168|ref|YP_985064.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|120605248|gb|ABM40988.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 217

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+F  + VL + L L    L R    K        YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLKLFFITLVLAVPLGLAL-ALMRLSRWKALSGAVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +   A +   AA+ AEI R+G+ +V RGQ EAA  LG
Sbjct: 74  LPFVPVI--------GVRLPDFPAAVAAFALNYAAYFAEIFRAGIQSVDRGQYEAAKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++ +  R ++LPQ +RSI+PP++++ + L+K++SL   +   DL+     I+ +     
Sbjct: 126 MSYGQTMRRIVLPQMVRSILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              ++    YL +++++     RL  + A  ++
Sbjct: 185 TPFIVAAAFYLVMTLVLTWGFQRLEKRYAKFDQ 217



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L F  ++ A  +G  +   RLS  K ++     Y+ + R  P ++ + F+
Sbjct: 11  LAQGATVTLKLFFITLVLAVPLGLALALMRLSRWKALSGAVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|229591529|ref|YP_002873648.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229363395|emb|CAY50556.1| putative permease component of ABC transporter [Pseudomonas
           fluorescens SBW25]
          Length = 258

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 5/233 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI----S 225
           F  +    +              + ++ ++  L    L            PLL++     
Sbjct: 3   FNWDVFWQYLLQPSGVYLTGLWLTCLISVLAMLLGCALGLAAALLRLSKNPLLHLPVRFY 62

Query: 226 TFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            +L+ G P LV I   Y  L        +   + G  V     +  IAL     A++AEI
Sbjct: 63  VWLMRGTPLLVQIVFLYTALAAGGIFRFEDIELFGLIVPGNIQAAIIALGLNEGAYMAEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EA  +LG+   K  R ++LPQA R I+PPL +++  +LKN++L   +
Sbjct: 123 IRAGIGAVDKGQYEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +L+     I + T +  E+ L+    +L+L+ +   F   L  + +  ++
Sbjct: 183 GVQELLLSTQMITSATFRVFELYLVVALYFLTLTTLWGFFQRWLETRFSQSDR 235


>gi|221210006|ref|ZP_03582987.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
 gi|221170694|gb|EEE03160.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
          Length = 595

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 1/239 (0%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +    FL+   LS    T+       VF F LG +++      SR        
Sbjct: 61  NPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGFALGALVAFARLSRSRLLSASAWT 120

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYIALSCY 276
            + L      ++  L    L  L   +    P      F   +T +   F +  + L+  
Sbjct: 121 FVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFAAAVLGLTLN 180

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AAF AE++R G+++V +GQ+EAA ALGL H + T  ++LPQAMR+I+P   +  + L K
Sbjct: 181 HAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMRAILPTAFNDLIVLAK 240

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +S+   +   +L      I  +  + I ++++    YL +  +++    ++    A  
Sbjct: 241 GTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSAIQVQVERHYARG 299



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +    +G LV   RLS ++L++     +V +FR+IP       + 
Sbjct: 79  LSGLARTLVLTLLGAVFGFALGALVAFARLSRSRLLSASAWTFVWLFRSIPL------IV 132

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 133 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFAAAVLGLTL 179


>gi|256392946|ref|YP_003114510.1| polar amino acid ABC transporter inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
 gi|256359172|gb|ACU72669.1| polar amino acid ABC transporter, inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
          Length = 352

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 12/270 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-----TNAKIFV 191
           R IP      ++    + VL       ++    +  +R   +    +         ++  
Sbjct: 49  RVIPLRHPGRWIATVAVLVLAAQFAHGLITNPFYQWDRFEYWFARPVIMRGLVVTLRVTA 108

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHF 246
            S VLG+   +    L+R         +  LYI  F    L  ++LI   +      L  
Sbjct: 109 LSAVLGLAGGVLL-ALARQSRNPVLNLVSWLYIWVFRSVPLIVVLLILFNFSALYKTLSL 167

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P    F     + ++ E +   + LS   AA+ AE+VR+GL++V +GQ EAA +LGL 
Sbjct: 168 GVPFGPGFFHFDENRLATELVVATVGLSLNEAAYAAEVVRAGLLSVDQGQHEAAASLGLP 227

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIE 365
                R ++LPQA+R+I+P   +Q + L+K +SL   V   DL     T+ +      + 
Sbjct: 228 RGYQFRRIVLPQALRAIVPAYVNQLIGLIKGTSLVFYVSLLDLFGQVQTMGSTYPADIVP 287

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++L+    Y+ L+ +++     +  + +  
Sbjct: 288 LLLVATAWYVILTSVVSAVQFYVERRYSRG 317



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 49/147 (33%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I+ G V T  +     +     G L+   R S N ++  +  +Y+ VFR++P +VV+  
Sbjct: 95  VIMRGLVVTLRVTALSAVLGLAGGVLLALARQSRNPVLNLVSWLYIWVFRSVPLIVVLLI 154

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           L+        +       P     +   L+   +       +   ++   +V +   +  
Sbjct: 155 LFNFSALYKTLSLGVPFGPGFFHFDENRLATELVVATVGLSLNEAAYAAEVVRAGLLSVD 214

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPT 234
                      LP  Y    ++     
Sbjct: 215 QGQHEAAASLGLPRGYQFRRIVLPQAL 241


>gi|227114069|ref|ZP_03827725.1| amino acid ABC transporter [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 254

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 15/239 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FG 231
            +    +T+       +     G+ L L     + H   K      + +     I    G
Sbjct: 16  FMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQWPVRIYISAFRG 75

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAA 279
            P  V I + +       +  +   +  S +               F+S  +A++    A
Sbjct: 76  TPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCIVAITLNAGA 135

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI R+G+ ++ RGQMEA+ +LG+++ +  R V+LPQA R ++PPL +  + ++K+SS
Sbjct: 136 YVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAIAIVKDSS 195

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA A+G ADL     T+        E  L    +Y  ++ +++L +  +  +    + +
Sbjct: 196 LASAIGLADLAYAARTVSGAYATYWEPYLTISIVYWVITFLLSLLVRHMETRFGKSDSR 254



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVY 132
             YA   + G   T       +I  T  G  +G GRL+              V W  R+Y
Sbjct: 10  QEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +  FR  P  V I  ++ +++ +   P   +++   +   +   +  +      + I   
Sbjct: 70  ISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCIVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|331268245|ref|YP_004394737.1| amino acid ABC transporter permease [Clostridium botulinum
           BKT015925]
 gi|329124795|gb|AEB74740.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           BKT015925]
          Length = 235

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 10/227 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+   +T+  +    + S +LG V +L      +    K  +A+  ++I   ++ G 
Sbjct: 16  PFFLNGAGITIILSLITVLLSSILGTVFALM-----KLSRIKILRAISTIFIE--IVRGT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTAAFIAEIVRSGL 289
           P LV + + Y    +              +  +F  L    I L+  + A++AEI+R G+
Sbjct: 69  PLLVQVYIFYYGIPEVLENIGVYLPQIDIMGNDFTGLSMIVITLALNSTAYVAEIIRGGI 128

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ+EAA +LGLT   A R V++PQA+++I+P L ++++ ++K SS+   VG  +L
Sbjct: 129 ESINKGQIEAARSLGLTQSMAMRYVIIPQAIKNILPALGNEFITVIKESSIVSVVGIKEL 188

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    T    T +     L    IY  L+  ++  +     ++ L +
Sbjct: 189 MFNAKTASGATLKVFTPYLAAAAIYFILTFTLSKLLGIFERRMKLSD 235



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 54/117 (46%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    L G   T  L+   ++ ++I+GT+    +LS  K++  I  +++E+ R  P L
Sbjct: 12  DTYLPFFLNGAGITIILSLITVLLSSILGTVFALMKLSRIKILRAISTIFIEIVRGTPLL 71

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           V ++  Y  +  VL      +     M  +  GLS   +T+  N+  +V   + G +
Sbjct: 72  VQVYIFYYGIPEVLENIGVYLPQIDIMGNDFTGLSMIVITLALNSTAYVAEIIRGGI 128


>gi|156972753|ref|YP_001443660.1| ABC-type amino acid transport system permease component [Vibrio
           harveyi ATCC BAA-1116]
 gi|156524347|gb|ABU69433.1| hypothetical protein VIBHAR_00418 [Vibrio harveyi ATCC BAA-1116]
          Length = 246

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 119/245 (48%), Gaps = 29/245 (11%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSR 209
                       G+      ++    T+  +    +F+  +G++++L A       +   
Sbjct: 22  WGWYVLDPSTEQGLTNIKFLVAGFNDTIQVSLLSMLFAMTIGLIVALPALSDSPALKWIN 81

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + +  +++P+L +  ++ +G+PTL+ ++L +                       F + 
Sbjct: 82  RVYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-----------------------FWAG 118

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA R I+PPL +
Sbjct: 119 VIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGN 178

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++ +LK SSL   +G +DL      ++      +EI    +  YL L ++++  +  L 
Sbjct: 179 QFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLE 238

Query: 390 AKIAL 394
            +IA+
Sbjct: 239 KRIAI 243



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 40/70 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    ++ GF +T  ++   M+ A  IG +V    LS +  + WI RVYVEV R+IP LV
Sbjct: 36  TNIKFLVAGFNDTIQVSLLSMLFAMTIGLIVALPALSDSPALKWINRVYVEVIRSIPVLV 95

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 96  LLLWVYYGMP 105


>gi|115361199|ref|YP_778336.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115286527|gb|ABI92002.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 297

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 5/205 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V +  LG+VL +  T + R        A+   YI  F   G P ++ + L + L  
Sbjct: 82  IVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAHGYIWLF--RGTPVILQLLLWFNLGL 138

Query: 247 DKPVLGQFNFIGGSTV--SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P LG        TV     F++  + L     A+ +E+VR+GL++V  GQ EAA ++G
Sbjct: 139 VFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIG 198

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V +A+++     I     + I
Sbjct: 199 MARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVI 258

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
           E++++    YL++  +++L   R+ 
Sbjct: 259 ELLIVAGIWYLAIVTVLSLAQARVE 283



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A +IL G  NT  +    M    ++G +    RLS+N ++  I   Y+ +FR  P ++ +
Sbjct: 71  ARSILTGLGNTIVMTVLAMTLGVVLGVVTAVMRLSSNPVLGAIAHGYIWLFRGTPVILQL 130

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 131 LLWFNLGL 138


>gi|330432539|gb|AEC17598.1| glutamine ABC transporter permease protein [Gallibacterium anatis
           UMN179]
          Length = 249

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 13/251 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           ++  +LS LP  D +                   T+      F+   V+ + ++L     
Sbjct: 12  IFHLILSNLPWMDDNKATIAIDAFFPMLQGMILYTIPLTIISFIVGMVIALAIALLRVTP 71

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            +HF  K   AL   YIS   I G P L  + + +    +           G T+ P   
Sbjct: 72  RKHFLHKIAYALSGFYISA--IRGTPLLAQLFIIFYALPNV----------GITLDP-LP 118

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  IA S  T A+ +E VR+ +++VP+GQ EA   +G+++ +    ++ PQA+R  +PPL
Sbjct: 119 TAIIAFSLNTGAYASETVRAAILSVPKGQWEAGYTIGMSYWQNFFRIIAPQALRVAVPPL 178

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ LLK +SLA  V   +++     I ++T + + +      IY     ++     R
Sbjct: 179 SNSFIGLLKETSLASVVLVPEMMRQANVISSRTYEFLLVYCEAALIYWIACAILGYAQQR 238

Query: 388 LNAKIALKEKK 398
           L         +
Sbjct: 239 LEKHFERYVAR 249


>gi|237737255|ref|ZP_04567736.1| amino acid ABC transporter permease [Fusobacterium mortiferum ATCC
           9817]
 gi|229421117|gb|EEO36164.1| amino acid ABC transporter permease [Fusobacterium mortiferum ATCC
           9817]
          Length = 236

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 116/232 (50%), Gaps = 19/232 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-------LLYI 224
               L+  + ++ T A   +    LGI ++L    LS  +  K  K          L + 
Sbjct: 17  YKYILNGLSFSVGTTALAAIIGIALGIFIALLQ--LSHFYPFKHSKNWKKFNPLSKLAFG 74

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V + +   L F          +G    +P  +   I+    + A++AEI
Sbjct: 75  YVDLIRGTPAVVQLMILANLIF----------VGSLRDTPILVIAAISFGINSGAYVAEI 124

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+  + +GQMEAA ALG+ + ++ + +++PQA++ I+P L S+++ LLK +S+   +
Sbjct: 125 IRAGIEGLDKGQMEAARALGMNYGQSMKEIIIPQAVKKILPALVSEFITLLKETSIVGFI 184

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  DL+     I +QT + +E +L   FIYL ++ +   FM R+   + + +
Sbjct: 185 GGVDLLRSANIITSQTYRGVEPLLAVGFIYLIMTAVFTKFMRRVEKGLKVSD 236


>gi|90961557|ref|YP_535473.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
 gi|90820751|gb|ABD99390.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius UCC118]
          Length = 485

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 13/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ V   +   +  +    L      K  + +    I  F   GLP LVL    Y    
Sbjct: 291 LKLTVVGIIGATIFGILIGMLG-VVPNKFAQGISTTIIYIF--RGLPLLVLALFIYN--- 344

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L         +  P F++  I L+    A+ A  V+ G+ AV +GQMEAA +LGL+
Sbjct: 345 GIPSLTG-------SKIPAFIAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLS 397

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K+ R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L   G  II +  +   I
Sbjct: 398 FGKSMRKVILPQGVKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFRI 457

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             I   +YL +  ++ L    +  +I
Sbjct: 458 WGIIAIMYLLIITILTLLSKWIERRI 483



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A L G V T  L   G+I ATI G L+G   +  NK    I    + +FR +P LV+  
Sbjct: 281 RAFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLAL 340

Query: 147 FLYKSVLSV 155
           F+Y  + S+
Sbjct: 341 FIYNGIPSL 349


>gi|253689718|ref|YP_003018908.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756296|gb|ACT14372.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 254

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 15/239 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FG 231
            +    +T+       +     G+ L L     + H   K      + +     I    G
Sbjct: 16  FMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQWPVRIYISAFRG 75

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAA 279
            P  V I + +       +  +   +  S +               F+S  +A++    A
Sbjct: 76  TPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDVARTLRADYGAFLSCIVAITLNAGA 135

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI R+G+ ++ RGQMEA+ +LG+++ +  R V+LPQA R ++PPL +  + ++K+SS
Sbjct: 136 YVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAIAIVKDSS 195

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA A+G ADL     T+        E  L    +Y  ++ +++L +  +  +    + +
Sbjct: 196 LASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLVRHMETRFGKSDSR 254



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVY 132
             YA   + G   T       +I  T  G  +G GRL+              V W  R+Y
Sbjct: 10  QEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +  FR  P  V I  ++ +++ +   P   +++   +   +   +         + I   
Sbjct: 70  ISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDVARTLRADYGAFLSCIVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|218895475|ref|YP_002443886.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus G9842]
 gi|228899076|ref|ZP_04063348.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL
           4222]
 gi|228963460|ref|ZP_04124618.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|218541671|gb|ACK94065.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus G9842]
 gi|228796231|gb|EEM43681.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228860517|gb|EEN04905.1| Amino acid ABC transproter, permease [Bacillus thuringiensis IBL
           4222]
          Length = 230

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VLG ++ L      R  + K   ++  +YI   +I G P +V IA+ Y  
Sbjct: 18  VTLQLTLTSLVLGSLIGLL-FAFFRISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V   F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG
Sbjct: 73  ----------FGITSVVVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G +I     Q +
Sbjct: 123 MPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I    YL L ++   F+N L  ++  KE
Sbjct: 183 DTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|163857187|ref|YP_001631485.1| putative amino-acid ABC transporter, permease protein [Bordetella
           petrii DSM 12804]
 gi|163260915|emb|CAP43217.1| putative amino-acid ABC transporter, permease protein [Bordetella
           petrii]
          Length = 226

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 14/230 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   + +         +     + + SF  G+VL+ F   L R F      AL   Y
Sbjct: 1   MPAWLQLMIDSFWPLLHAGLVFTVPLTLLSFAGGLVLA-FIVALIRLFGPAPLVALVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +LI G P LV + + +                   V     +  I  +    A+ +E
Sbjct: 60  V--WLIRGTPLLVQLFVIFY-----------GLPSVGIVLDPLPAALIGFTLNVGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P+GQ EAA +L +T  +A R  +LPQA R  +PPL + +++L+K++SLA  
Sbjct: 107 VIRGAIESIPKGQWEAAYSLSMTRGQAMRRTVLPQAARVAVPPLANSFISLVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   ++      I   T + + +      IYL  S  ++    RL  +  
Sbjct: 167 LTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSALSAAQTRLERRYG 216



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G V T  L         ++  +V   RL     +  + R YV + R  P L
Sbjct: 10  DSFWPLLHAGLVFTVPLTLLSFAGGLVLAFIVALIRLFGPAPLVALVRFYVWLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV  + D       G  LN
Sbjct: 70  VQLFVIFYGLPSVGIVLDPLPAALIGFTLN 99


>gi|330809176|ref|YP_004353638.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327377284|gb|AEA68634.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 258

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 5/233 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI----S 225
           F  +    +              + ++ ++  L    L            PLL++     
Sbjct: 3   FNWDVFWQYLLQPSGVYLTGLWLTCLISVLAMLLGCALGLAAALLRLSKNPLLHLPVRFY 62

Query: 226 TFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            +L+ G P LV I   Y  L        +   + G  +     +  IAL     A++AEI
Sbjct: 63  VWLMRGTPLLVQIVFLYTALAAGGIFRFEDIGLFGLVIPGNIQAAIIALGLNEGAYMAEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EA  +LG+T  K  R ++LPQA R I+PPL +++  +LKN++L   +
Sbjct: 123 IRAGIGAVDKGQYEAGRSLGMTFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +L+     + + T +  E+ L+    +L L+ +   F   L A+    ++
Sbjct: 183 GVQELLLSTQMVTSATFRVFELYLVVAIYFLLLTTLWGFFQRWLEARFGQSDR 235


>gi|50084481|ref|YP_045991.1| amino acid ABC transporter ATP-binding protein [Acinetobacter sp.
           ADP1]
 gi|49530457|emb|CAG68169.1| putative amino acid transporter (ABC superfamily, atp_bind and
           membrane) [Acinetobacter sp. ADP1]
          Length = 509

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 102/239 (42%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +      F +F            +  ++  +    VLG VL+      ++    +  K 
Sbjct: 1   MEFDWEYFFSLFGFAEFWKACVTVIVISSLSWFIGMVLGFVLAC-----AKVSAPRWIKI 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              LYI  F    +P +VL+   Y L    P+      +        F++  I+++   A
Sbjct: 56  PVELYIWFF--RSIPLMVLLVFVYNLPQMFPITQPLLGV-------PFIAGLISMTVTEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R GL++V +GQ EA  AL        RL+++PQA R  +P L ++++ ++K S
Sbjct: 107 AYMAEIHRGGLLSVTKGQNEAGHALSFGFFGIQRLIVIPQAFRIALPTLINEFITVIKLS 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           S+   +   +L+  G  +       +E +L     Y+++  +       L   + L+ +
Sbjct: 167 SILSVISLPELLLTGQRLYADNFLVMETLLAVAVYYVTIVTLFTWLFKWLENFLNLQRR 225



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 5/194 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                V    ++        ++G ++   ++SA + +     +Y+  FR+IP +V++ F+
Sbjct: 17  FWKACVTVIVISSLSWFIGMVLGFVLACAKVSAPRWIKIPVELYIWFFRSIPLMVLLVFV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLF 203
           Y              V      ++        +       +   +         +    F
Sbjct: 77  YNLPQMFPITQPLLGVPFIAGLISMTVTEAAYMAEIHRGGLLSVTKGQNEAGHALSFGFF 136

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             +      +    ALP L      +  L +++ +    +L      L   NF+   T+ 
Sbjct: 137 GIQRLIVIPQAFRIALPTLINEFITVIKLSSILSVISLPELLLTGQRLYADNFLVMETLL 196

Query: 264 PEFMSLYIALSCYT 277
              +     ++ +T
Sbjct: 197 AVAVYYVTIVTLFT 210


>gi|313125640|ref|YP_004035910.1| amino acid ABC transporter membrane protein, paat family
           [Halogeometricum borinquense DSM 11551]
 gi|312292005|gb|ADQ66465.1| amino acid ABC transporter membrane protein, PAAT family
           [Halogeometricum borinquense DSM 11551]
          Length = 277

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 9/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L           K+ V   +L +   +F   L+R         +   YI  F   G
Sbjct: 59  MQTVLPQFVDAYILVLKVVVLGSILSVSAGIFVG-LARVSKTSLTSGIAQSYIQFF--RG 115

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L  I + Y   F  P L    F        EF +  IAL+   AA++ E VR G+ +
Sbjct: 116 TPLLFQIFVIY---FGIPALWPGTF---PIQDWEFPTAIIALTLNHAAYVGEAVRGGINS 169

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEAA +LG+++ ++ R V+LPQA R+ +  + +  + L+K++SL   +   +L+ 
Sbjct: 170 VPEGQMEAARSLGMSYIQSMREVILPQAWRNALAAIGNDQVILVKDTSLMTVIALPELIQ 229

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + +        ++I    YLS++I +   ++ L  +
Sbjct: 230 QFRDVNSAVFDPWTPLVIVAIAYLSITIPLGKLVDHLENR 269



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 30/166 (18%)

Query: 4   NARKTVTRYFSRMKFLYDM--RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
            A         R   L D   +    S+  + AL +  +  + +                
Sbjct: 7   GASSETDASRDRNTVLNDETLKYLGASLSALFALGILGLVAYIIATQV------------ 54

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
                   FE+ Q ++P           +  ++    +   G I +   G  VG  R+S 
Sbjct: 55  -------SFELMQTVLP---------QFVDAYILVLKVVVLGSILSVSAGIFVGLARVSK 98

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
             L + I + Y++ FR  P L  IF +Y  + ++ P         F
Sbjct: 99  TSLTSGIAQSYIQFFRGTPLLFQIFVIYFGIPALWPGTFPIQDWEF 144


>gi|115358613|ref|YP_775751.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115283901|gb|ABI89417.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 594

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 1/243 (0%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           S+L  P     +    FL+   LS    T+       VF F LG  ++L     SR    
Sbjct: 53  SILGNPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGFALGAFVALARLSRSRLLAA 112

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYIA 272
                + L      ++  L    L  L   +    P      F   +T +   F++  + 
Sbjct: 113 SAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLG 172

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR+I+P   +  +
Sbjct: 173 LTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMRAILPTAFNDLI 232

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L K +S+   +   +L      I  +  + I ++++    YL +  +++    ++    
Sbjct: 233 SLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSAIQVQVERHY 292

Query: 393 ALK 395
           A  
Sbjct: 293 ARG 295



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +    +G  V   RLS ++L+A     +V +FR+IP       + 
Sbjct: 75  LSGLARTLVLTLLGAVFGFALGAFVALARLSRSRLLAASAWTFVWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTL 175


>gi|228957269|ref|ZP_04119035.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228802460|gb|EEM49311.1| Amino acid ABC transporter [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 207

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 106/208 (50%), Gaps = 14/208 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + + +F++G++L+   T L+R    +  + +  +Y+S  +I G P LV + + + 
Sbjct: 7   FTTIPLTLITFIIGLILATL-TALARISGSRILQWIARIYVS--IIRGTPLLVQLFIIF- 62

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L              + +  +  S    A+ +EI+R+ ++++P+GQ EAA  +
Sbjct: 63  --YGLPTLN--------IEVEPYAAAVVGFSLNVGAYASEIIRASILSIPKGQWEAAYTI 112

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +A + V+LPQA R  IPPL++ +++L+K++SLA  +   ++      I     + 
Sbjct: 113 GMTYPQALKRVILPQATRVSIPPLSNTFISLVKDTSLASLILVTEMFRKAQEIAAMNYEF 172

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      IY  +  ++++    L  +
Sbjct: 173 LIVYFEAGLIYWVICFLLSIVQQMLEKR 200



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 6   VFTTIPLTLITFIIGLILATLTALARISGSRILQWIARIYVSIIRGTPLLVQLFIIFYGL 65

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    +       G  LN
Sbjct: 66  PTLNIEVEPYAAAVVGFSLN 85


>gi|283786454|ref|YP_003366319.1| putative membrane component of ABC transporter [Citrobacter
           rodentium ICC168]
 gi|282949908|emb|CBG89533.1| putative membrane component of ABC transporter [Citrobacter
           rodentium ICC168]
          Length = 254

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 15/237 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-FHEKTGKALPLLYISTFL--IFG 231
            +    +T+           + G+ L L     + H F +   + L    +  ++    G
Sbjct: 16  FMEGAWMTIKCTIICVCLGTLWGLTLGLGRMAKAEHGFWKYALRYLVQFPVRFYVSAFRG 75

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE------------FMSLYIALSCYTAA 279
            P  V I + +       +  +   +  S +               F+S  +A++    A
Sbjct: 76  TPLFVQIMVVHFALVPLFINPRDGILVTSGIMSADLARELRSGYGAFLSCIVAITLNAGA 135

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI R+G+ ++  GQMEA+ ALG+   K  R V+LPQA R I+PPL +  + ++K+SS
Sbjct: 136 YVSEIFRAGIQSIDPGQMEASRALGMPWWKTMRKVILPQAFRRILPPLGNNAIAIVKDSS 195

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           LA A+G ADL     T+        E  L    +Y  L+ ++A  +NRL  +    +
Sbjct: 196 LASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLAQMVNRLEKRFGKSD 252



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVY 132
             YA   + G   T       +   T+ G  +G GR++             LV +  R Y
Sbjct: 10  QEYAPLFMEGAWMTIKCTIICVCLGTLWGLTLGLGRMAKAEHGFWKYALRYLVQFPVRFY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V  FR  P  V I  ++ +++ +   P   I++  G+   +      +      + I   
Sbjct: 70  VSAFRGTPLFVQIMVVHFALVPLFINPRDGILVTSGIMSADLARELRSGYGAFLSCIVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|152974512|ref|YP_001374029.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152023264|gb|ABS21034.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 232

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F++G++L+   T L+R  + +  + +  +Y+S  +I
Sbjct: 18  IMQASFMPMLKEAIFTTIPLTIITFIIGLILATL-TALARISNSRILQWIARIYVS--II 74

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + L +   +  P L              + +  I  S    A+ +EI+R+ +
Sbjct: 75  RGTPLLVQLFLIF---YGLPTLQ--------IEIDPYTAAVIGFSLNVGAYASEIIRASI 123

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + ++LPQA R  IPPL++ +++L+K++SLA  +   ++
Sbjct: 124 LSIPKGQWEAAYTMGMTYTQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTEM 183

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      +Y  +  ++++    L  +
Sbjct: 184 FRKAQEIAAMNYEFLIVYFEAALMYWVICFLLSIVQQILEKR 225



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     I   I+ TL    R+S ++++ WI R+YV + R  P LV +F ++  +
Sbjct: 31  IFTTIPLTIITFIIGLILATLTALARISNSRILQWIARIYVSIIRGTPLLVQLFLIFYGL 90

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    D       G  LN
Sbjct: 91  PTLQIEIDPYTAAVIGFSLN 110


>gi|254254090|ref|ZP_04947407.1| ABC-type polar amino acid transport system ATPase component
           [Burkholderia dolosa AUO158]
 gi|124898735|gb|EAY70578.1| ABC-type polar amino acid transport system ATPase component
           [Burkholderia dolosa AUO158]
          Length = 590

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 1/255 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ +  +   + S+L  P     +    FL+   LS    T+       V  F LG +++
Sbjct: 42  VLALALIAGVLHSILGNPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVLGFALGALVA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     SR         + L      ++  L    L  L   +    P      F   +T
Sbjct: 102 LARLSRSRLLAASAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDAPTT 161

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F++  + L+   AAF AE++R G+++V +GQ+EAA ALGL   + T  ++LPQAM
Sbjct: 162 ELISPFLAAVLGLTLNHAAFSAEVIRGGILSVDQGQLEAAAALGLPRSRQTTRIVLPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P   +  + L K +S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 222 RAILPTAFNDLITLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATAWYLIILTV 281

Query: 381 IALFMNRLNAKIALK 395
           ++    ++    A  
Sbjct: 282 LSAIQVQVERHYARG 296



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +    +G LV   RLS ++L+A     +V +FR+IP       + 
Sbjct: 76  LSGLARTLVLTLLGAVLGFALGALVALARLSRSRLLAASAWTFVWLFRSIPL------IV 129

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 130 LLLILNNLGYLYEHVRLGVPFTDIVWFDAPTTELISPFLAAVLGLTL 176


>gi|288871381|ref|ZP_06117362.2| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Clostridium hathewayi DSM 13479]
 gi|288863723|gb|EFC96021.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Clostridium hathewayi DSM 13479]
          Length = 288

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/247 (21%), Positives = 99/247 (40%), Gaps = 19/247 (7%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-------TR 206
            ++P      +           L     TM           ++G+ + +          R
Sbjct: 36  EIMPESFIGGIGYILQEYGMSYLLGAAKTMKIALVGTSIGCLIGLAVGIIRTIPVKKDDR 95

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R       KA+   Y+  F   G P +V       L F    + Q N   G       
Sbjct: 96  MARKVFLTAVKAVMAAYVEIF--RGTPMMVQAMF---LFFGASAVFQINMSIGF------ 144

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            + +  +S  T A++AE VR G+ +   GQ E A ALG+TH +   LV+LPQA+R+I+P 
Sbjct: 145 -AAFFIVSINTGAYMAESVRGGINSTDPGQTEGAKALGMTHVQTMVLVVLPQALRNIMPQ 203

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + +  +  +K++ +   +G  +L      +     +  E   I M +Y  L+   +  + 
Sbjct: 204 IGNNLIINIKDTCVLSVIGVVELFYTSKGVAGAYYRYFEAFTITMVLYFVLTFTCSRILL 263

Query: 387 RLNAKIA 393
            +  ++A
Sbjct: 264 LIEKRMA 270



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 35/99 (35%), Gaps = 12/99 (12%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK------------LVAWICR 130
             Y  + L+G   T  +A  G     +IG  VG  R    K             V  +  
Sbjct: 51  QEYGMSYLLGAAKTMKIALVGTSIGCLIGLAVGIIRTIPVKKDDRMARKVFLTAVKAVMA 110

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            YVE+FR  P +V   FL+    +V  I        F +
Sbjct: 111 AYVEIFRGTPMMVQAMFLFFGASAVFQINMSIGFAAFFI 149


>gi|68535882|ref|YP_250587.1| putative ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|68263481|emb|CAI36969.1| putative ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
          Length = 315

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 8/264 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +++   +   ++S      +     F   L+ R +     T+       +   V+
Sbjct: 28  RWIAAVILAALVVWFIISAAQNEAYHWDTYFQYLLDTRIVKAAMHTIALTILAMIIGVVI 87

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQLHFDKPVLGQFN 255
           G ++++      R       + +  L++  F    +   LV   L   L+    V     
Sbjct: 88  GAIVAVL-----RMSPNPVLQGVAWLFLWVFRGTPVYVQLVFWGLLSSLYQSVSVGFA-E 141

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 +   F+   + L    AA++AEIVR+G+ AVP GQ EA+ ALG+T  +  R  +
Sbjct: 142 INLEQVLQNAFILAVLGLGLNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWGQNMRRTV 201

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +PQAMR IIPP  +++++LLK +SL +AV + A+L      I N   Q + ++L+    Y
Sbjct: 202 MPQAMRIIIPPTGNEFISLLKTTSLVIAVPYTAELYGRATDISNSLFQPVPLLLVAATWY 261

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ ++ +    +    +    +
Sbjct: 262 LVITSILMVGQFYVERYFSRGSSR 285



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 21/118 (17%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           I A++L  + +W + +   N E  +      +L +                      I+ 
Sbjct: 30  IAAVILAALVVWFIISAAQN-EAYHWDTYFQYLLDTR--------------------IVK 68

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             ++T  L    MI   +IG +V   R+S N ++  +  +++ VFR  P  V + F  
Sbjct: 69  AAMHTIALTILAMIIGVVIGAIVAVLRMSPNPVLQGVAWLFLWVFRGTPVYVQLVFWG 126


>gi|167043235|gb|ABZ07942.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_ANIW141L21]
          Length = 774

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 3/185 (1%)

Query: 212 HEKTGKALPLLYISTFLIFGLPT--LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           +    +  PLL    F+ FGL    LV    +  L      L +F  I        ++S 
Sbjct: 582 YTDIFRNTPLLVQFLFIHFGLQLGKLVQGPAEAMLAGSTSFLAEF-IIDEFLSDRAYISA 640

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
             AL   + A+  E +R  + A+P GQMEA  ++GL + +  R V++PQA+R  IPP+ +
Sbjct: 641 IFALGLNSGAYQCETIRGAIAAIPSGQMEAGRSIGLNYMQTMRRVIMPQAIRICIPPMGN 700

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +NL+ NSSLA+ +G+A+L   G   I  T Q      + +  Y  ++  +AL +  L 
Sbjct: 701 EMVNLVLNSSLAMVIGYAELTRKGKLAIAITWQVFWGWGMVLISYFIVTWTLALLLRYLE 760

Query: 390 AKIAL 394
            K  +
Sbjct: 761 NKTRI 765


>gi|296116099|ref|ZP_06834718.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977356|gb|EFG84115.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 485

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 110/247 (44%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +  + L+  P+   +    F    +   L    +T+       V + ++ I ++L     
Sbjct: 242 VGATDLTAGPVITFAWGDFFRALASGAFLRGAGVTLLLALASHVTAIIISIPIAL----- 296

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 K G    LL +  ++   +PTL+ +   +        L QF  I        F+
Sbjct: 297 --RLGGKPGPVRALLGLYIYIFRAVPTLLQLLFVWN------ALPQFCPIFREAWFSPFL 348

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           + +I+LS   +A+ AEI RS L+AV  GQ+ AA ALG+   +  R V+ PQA+R  +PP 
Sbjct: 349 AAWISLSLNESAYQAEINRSALVAVDAGQIAAARALGMGTGQTYRHVVFPQALRIALPPT 408

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + ++ LLK +SLA  +   +L+SV    + ++ +  E     +  YL + +   +    
Sbjct: 409 LNDFITLLKTTSLASVISLHELLSVAQVEVARSFEFSEYYAAALVYYLLMVLFFIMLQKI 468

Query: 388 LNAKIAL 394
           +  ++  
Sbjct: 469 MEHRLGR 475



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 41/104 (39%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  LA +  + A II   +          V  +  +Y+ +FR +P L+ + F
Sbjct: 268 AFLRGAGVTLLLALASHVTAIIISIPIALRLGGKPGPVRALLGLYIYIFRAVPTLLQLLF 327

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           ++ ++    PI   +   PF     +  L+      + N    V
Sbjct: 328 VWNALPQFCPIFREAWFSPFLAAWISLSLNESAYQAEINRSALV 371


>gi|161520734|ref|YP_001584161.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189353081|ref|YP_001948708.1| polar amino acid transport system ATP-binding protein [Burkholderia
           multivorans ATCC 17616]
 gi|160344784|gb|ABX17869.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189337103|dbj|BAG46172.1| polar amino acid transport system ATP-binding protein [Burkholderia
           multivorans ATCC 17616]
          Length = 595

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 1/239 (0%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +    FL+   LS    T+       VF F LG +++      SR        
Sbjct: 61  NPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGFALGALVAFARLSRSRLLSASAWT 120

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYIALSCY 276
            + L      ++  L    L  L   +    P      F   +T +   F +  + L+  
Sbjct: 121 FVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFAAAVLGLTLN 180

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AAF AE++R G+++V +GQ+EAA ALGL H + T  ++LPQAMR+I+P   +  + L K
Sbjct: 181 HAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMRAILPTAFNDLIVLAK 240

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +S+   +   +L      I  +  + I ++++    YL +  +++    ++    A  
Sbjct: 241 GTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSAIQVQVERHYARG 299



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +    +G LV   RLS ++L++     +V +FR+IP       + 
Sbjct: 79  LSGLARTLVLTLLGAVFGFALGALVAFARLSRSRLLSASAWTFVWLFRSIPL------IV 132

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 133 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFAAAVLGLTL 179


>gi|89072893|ref|ZP_01159450.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89051415|gb|EAR56870.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 272

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 19/272 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             +++ + ++ V +      L               +P +      G + +   +    +
Sbjct: 16  KPVISGLLQITVIILAIAWLLNSGADAMNYNWQWYRVPQYLFFKEDGEWFSAELIDGLLI 75

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A   +F+ + G+V +L      R  H   G++L   YI   +I   P LV I L 
Sbjct: 76  TIKISAISLIFTVIFGLVTALL-----RLSHSIVGRSLARGYIE--VIRNTPLLVQIYLL 128

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  + LS +  A+ AEI RSGL+ +P+GQ EAA 
Sbjct: 129 YFVF------------GPVLGLERFTTAVLGLSLFQGAYTAEIFRSGLMNIPKGQFEAAE 176

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+   + R ++LPQ +R I+P LT++ ++L+KNSS+   +   DL + G  I+  T 
Sbjct: 177 SLGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVADTA 236

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              EI      +YL ++++++ F   L  K+A
Sbjct: 237 MPFEIWFTIAAMYLCITLLLSAFATLLEHKLA 268



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 74/205 (36%), Gaps = 2/205 (0%)

Query: 79  YTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +  D  + +A ++ G + T  ++   +I   I G +    RLS + +   + R Y+EV R
Sbjct: 58  FKEDGEWFSAELIDGLLITIKISAISLIFTVIFGLVTALLRLSHSIVGRSLARGYIEVIR 117

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N P LV I+ LY     VL +   +  +           +    +   N     F     
Sbjct: 118 NTPLLVQIYLLYFVFGPVLGLERFTTAVLGLSLFQGAYTAEIFRSGLMNIPKGQFEAAES 177

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           + LS   +       +   + LP L      +    ++V I   + L      +     +
Sbjct: 178 LGLSKVDSYRYIILPQMLRRILPALTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVADTAM 237

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIA 282
               +     ++Y+ ++   +AF  
Sbjct: 238 P-FEIWFTIAAMYLCITLLLSAFAT 261


>gi|302386734|ref|YP_003822556.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302197362|gb|ADL04933.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 266

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 90/227 (39%), Gaps = 15/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-----PLLYIS 225
                L     TM       +   ++G  + +  T   +       + L      +L I 
Sbjct: 18  YGPSFLKGAGKTMAIAIVGTLIGCIIGFAVGIIQTIPVQKSDNPVKRYLLKLVKFILNIY 77

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +  G P +V     +   +   VL   N            + Y  +S  T A++AE V
Sbjct: 78  VEVFRGTPMMVQAMFIF---YGSSVLFGIN-------MSIVFAAYFIVSINTGAYMAETV 127

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G++++  GQ E A A+G+TH +    V++PQA+R+I+P + +  +  +K++ +   +G
Sbjct: 128 RGGILSIDPGQTEGAKAIGMTHFQTMVNVIMPQALRNIMPQIGNNLIINIKDTCVLSVIG 187

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +L      +        E   I M IY  L+   +  +     K+
Sbjct: 188 VVELFYATKGVAGAYYTYFEAFGITMIIYFILTFTCSRILRHWEKKM 234



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 12/82 (14%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICR 130
            +Y  + L G   T  +A  G +   IIG  VG  +                KLV +I  
Sbjct: 16  QNYGPSFLKGAGKTMAIAIVGTLIGCIIGFAVGIIQTIPVQKSDNPVKRYLLKLVKFILN 75

Query: 131 VYVEVFRNIPPLVVIFFLYKSV 152
           +YVEVFR  P +V   F++   
Sbjct: 76  IYVEVFRGTPMMVQAMFIFYGS 97


>gi|22126342|ref|NP_669765.1| ABC transporter permease for cystine [Yersinia pestis KIM 10]
 gi|45441365|ref|NP_992904.1| putative amino acid ABC transporter permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108807219|ref|YP_651135.1| putative amino-acid ABC transporter permease [Yersinia pestis
           Antiqua]
 gi|108812437|ref|YP_648204.1| amino-acid ABC transporter (permease) [Yersinia pestis Nepal516]
 gi|145598568|ref|YP_001162644.1| amino-acid ABC transporter (permease) [Yersinia pestis Pestoides F]
 gi|149366207|ref|ZP_01888242.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           CA88-4125]
 gi|162420463|ref|YP_001606502.1| amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926030|ref|ZP_02221862.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938721|ref|ZP_02227276.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166010948|ref|ZP_02231846.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166210693|ref|ZP_02236728.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167401053|ref|ZP_02306556.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420087|ref|ZP_02311840.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167425831|ref|ZP_02317584.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167469082|ref|ZP_02333786.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|218928966|ref|YP_002346841.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           CO92]
 gi|229896295|ref|ZP_04511465.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229897232|ref|ZP_04512388.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229897959|ref|ZP_04513110.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902810|ref|ZP_04517927.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270486599|ref|ZP_06203673.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294503990|ref|YP_003568052.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           Z176003]
 gi|21959324|gb|AAM86016.1|AE013849_7 putative ABC transporter permease for cystine [Yersinia pestis KIM
           10]
 gi|45436225|gb|AAS61781.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108776085|gb|ABG18604.1| amino-acid ABC transporter (permease) [Yersinia pestis Nepal516]
 gi|108779132|gb|ABG13190.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           Antiqua]
 gi|115347577|emb|CAL20487.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           CO92]
 gi|145210264|gb|ABP39671.1| amino-acid ABC transporter (permease) [Yersinia pestis Pestoides F]
 gi|149292620|gb|EDM42694.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           CA88-4125]
 gi|162353278|gb|ABX87226.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Angola]
 gi|165913335|gb|EDR31957.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922234|gb|EDR39411.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165990292|gb|EDR42593.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207873|gb|EDR52353.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961782|gb|EDR57803.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167049442|gb|EDR60850.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167055230|gb|EDR65027.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|229680257|gb|EEO76356.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229689000|gb|EEO81065.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693569|gb|EEO83618.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701218|gb|EEO89247.1| predicted transporter subunit: membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262361825|gb|ACY58546.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           D106004]
 gi|262366039|gb|ACY62596.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           D182038]
 gi|270335103|gb|EFA45880.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294354449|gb|ADE64790.1| putative amino-acid ABC transporter (permease) [Yersinia pestis
           Z176003]
 gi|320015412|gb|ADV98983.1| putative transporter subunit: membrane component of ABC superfamily
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 220

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +   +      L    LT+  +     F  +LG +L++      R  H      +  
Sbjct: 2   PESMQLVLDSAPFLLKGAWLTLQLSLGGMFFGLLLGFMLAMM-----RLSHFWPFSLISR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+S F   G P +  + + Y        L QF             +  I LS  TAA+ 
Sbjct: 57  FYVSIF--RGTPLIAQLFMIYY------GLPQFG-----IELEPMPAALIGLSLNTAAYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + ++ +GQ EAA ++G+T  +A   V+LPQA R+ +PPL + ++ L+K++SLA
Sbjct: 104 SETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      I ++T +   + L    IY  ++ +++   NRL A +  ++++
Sbjct: 164 ATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE 220



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS     + I R YV +FR  P +  +F +
Sbjct: 15  LLKGAWLTLQLSLGGMFFGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       +       G+ LN
Sbjct: 75  YYGLPQFGIELEPMPAALIGLSLN 98


>gi|229013364|ref|ZP_04170504.1| Arginine transport system permease protein artQ [Bacillus mycoides
           DSM 2048]
 gi|229134968|ref|ZP_04263774.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST196]
 gi|228648470|gb|EEL04499.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST196]
 gi|228747957|gb|EEL97822.1| Arginine transport system permease protein artQ [Bacillus mycoides
           DSM 2048]
          Length = 225

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   V  F+LG +L+L      R  +           I T +  G 
Sbjct: 19  PYILKGLEVTLKIVAASAVVGFILGTLLALCKIARIRVLNIAA-------DIYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQMMGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYSKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYILVIILTLVGKAIEGRMKKSD 225



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 38/80 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +  +  +   I+GTL+   +++  +++     +Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAASAVVGFILGTLLALCKIARIRVLNIAADIYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSVL 156
           R  P ++ +  +Y  V  ++
Sbjct: 69  RGTPLVLQLMIIYFGVPQMM 88


>gi|227327759|ref|ZP_03831783.1| amino acid ABC transporter [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 254

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 15/239 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FG 231
            +    +T+       +     G+ L L     + H   K      + +     I    G
Sbjct: 16  FMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQWPVRIYISAFRG 75

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAA 279
            P  V I + +       +  +   +  S +               F+S  +A++    A
Sbjct: 76  TPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVAITLNAGA 135

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI R+G+ ++  GQMEA+ +LG+++ +  R V+LPQA R ++PPL +  + ++K+SS
Sbjct: 136 YVSEIFRAGIQSIDHGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAIAIVKDSS 195

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA A+G ADL     T+        E  L    +Y  ++ +++L +  +  +    + +
Sbjct: 196 LASAIGLADLAYAARTVSGAYATYWEPYLTISIVYWVITFLLSLLVRHMEMRFGKSDSR 254



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVY 132
             YA   + G   T       +I  T  G  +G GRL+              V W  R+Y
Sbjct: 10  QEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +  FR  P  V I  ++ +++ +   P   +++   +   +   +  +      + +   
Sbjct: 70  ISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|221196380|ref|ZP_03569427.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221203052|ref|ZP_03576071.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221176986|gb|EEE09414.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221182934|gb|EEE15334.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 593

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 1/239 (0%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +    FL+   LS    T+       VF F LG +++      SR        
Sbjct: 59  NPRWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVFGFALGALVAFARLSRSRLLSASAWA 118

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYIALSCY 276
            + L      ++  L    L  L   +    P      F   +T +   F +  + L+  
Sbjct: 119 FVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDAPTTDLISPFAAAVLGLTLN 178

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AAF AE++R G+++V +GQ+EAA ALGL H + T  ++LPQAMR+I+P   +  + L K
Sbjct: 179 HAAFSAEVIRGGILSVDQGQLEAAAALGLPHGRQTARIVLPQAMRAILPTAFNDLIVLAK 238

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +S+   +   +L      I  +  + I ++++    YL +  +++    ++    A  
Sbjct: 239 GTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSAIQVQVERHYARG 297



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +    +G LV   RLS ++L++     +V +FR+IP       + 
Sbjct: 77  LSGLARTLVLTLLGAVFGFALGALVAFARLSRSRLLSASAWAFVWLFRSIPL------IV 130

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 131 LLLILNNLGYLYEHVRLGVPFTDIVWFDAPTTDLISPFAAAVLGLTL 177


>gi|188534833|ref|YP_001908630.1| Putative amino-acid transport system permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188029875|emb|CAO97759.1| Putative amino-acid transport system permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 227

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + +F LG+ L      L+R +  +  ++L   Y+  +LI G P 
Sbjct: 12  FWPMLYAGLTFTIPLTLIAFTLGLSLGAVV-ALARLYGPRPLQSLVRFYV--WLIRGTPL 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +               G       F +  I  +    A+ +EI+R+ L++VP+
Sbjct: 69  LVQLFLIFY-----------ALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G++  +  R +++PQA R  +PPL++ ++ L+K++SLA  +   +L     
Sbjct: 118 GQWEAAHSIGMSWSQTLRRIIMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I   T Q + +      IYL LS +++    RL  K+A
Sbjct: 178 RIAAVTYQPLILYTEAAIIYLLLSSVLSALQARLEKKLA 216



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G   T  L          +G +V   RL   + +  + R YV + R  P L
Sbjct: 10  ESFWPMLYAGLTFTIPLTLIAFTLGLSLGAVVALARLYGPRPLQSLVRFYVWLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++ ++  V    D       G  LN
Sbjct: 70  VQLFLIFYALPGVGITIDAFPAAVIGFTLN 99


>gi|331003246|ref|ZP_08326753.1| hypothetical protein HMPREF0491_01615 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412899|gb|EGG92279.1| hypothetical protein HMPREF0491_01615 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 230

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 111/231 (48%), Gaps = 16/231 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---T 226
           F+           +     I  F+ +LG VL  F+  + R+ ++ T +   L +I     
Sbjct: 13  FITEDRWLSLFKGLGVTLVITFFAVILGFVLG-FSVAVVRNIYDNTKRLKFLNFICNIYL 71

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V + + Y + F             S    + ++  +A    + A+ AEI R
Sbjct: 72  TVIRGTPVVVQLLIIYFVIFS------------SMRVDKSVAAILAFGINSGAYQAEIFR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +VP+GQMEA  +LG  + +    +++PQA+++I+P L ++++ L+K +S+A  +  
Sbjct: 120 SGINSVPKGQMEAGRSLGFNYAQTMIFIIMPQAIKNILPTLANEFIVLMKETSVAGYIAL 179

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL   G  I ++T  A+   L    +YL + ++ +  +  L   +A   +
Sbjct: 180 EDLTKAGDVIRSRTYSAMMPFLAVALLYLIMVMLFSYLVKLLERSLAKSGR 230



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 6/90 (6%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAW 127
            Q I+ + ++  + + +  G   T  + F  +I   ++G  V   R         K + +
Sbjct: 7   SQFILNFITEDRWLS-LFKGLGVTLVITFFAVILGFVLGFSVAVVRNIYDNTKRLKFLNF 65

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           IC +Y+ V R  P +V +  +Y  + S + 
Sbjct: 66  ICNIYLTVIRGTPVVVQLLIIYFVIFSSMR 95


>gi|238761655|ref|ZP_04622630.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
 gi|238700169|gb|EEP92911.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
          Length = 255

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 21/252 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY--- 223
           F   +                K  +   +LG    L    L R      G   P+LY   
Sbjct: 4   FRWEIIQEYAPLFMDGAWMTIKCTIICVILGTTWGLTLG-LGRLAQAPHGIWKPILYYFV 62

Query: 224 -----ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EF 266
                I    I G P  V I + +       +  +   +  + +               F
Sbjct: 63  QWPVRIYISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAF 122

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+++ K  R V+LPQA R ++PP
Sbjct: 123 LSCIVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMSYGKTMRKVILPQAFRRMLPP 182

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + ++K+SSLA A+G ADL     T+        E  L+   +Y  ++ +++L + 
Sbjct: 183 LGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLVISVVYWVITFILSLLVR 242

Query: 387 RLNAKIALKEKK 398
            +  +    + +
Sbjct: 243 HMETRFGKSDSR 254



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVY 132
             YA   + G   T       +I  T  G  +G GRL+              V W  R+Y
Sbjct: 10  QEYAPLFMDGAWMTIKCTIICVILGTTWGLTLGLGRLAQAPHGIWKPILYYFVQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +   R  P  V I  ++ +++ +   P   I++  G+  ++      +      + I   
Sbjct: 70  ISAIRGTPLFVQIMVVHFALVPLFINPRDGILVTNGIMSSDFARMLRSDYGAFLSCIVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|182439549|ref|YP_001827268.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178468065|dbj|BAG22585.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 305

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +   V    + + +  ++  P     +    F     L    LT+       V  F 
Sbjct: 43  WRWVAVAVTAVLVAQFINGLVTNPGWEWDVFAQFFSAPVILKAVWLTLQLTFYGTVLGFA 102

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDK 248
           LGIVL+       R       + +   YI  F    +P +V +   + L        F  
Sbjct: 103 LGIVLAFM-----RLSASPFLRTVAYGYIWAF--RSIPLIVQLLFWFNLAYLYKELQFGI 155

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F       +     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   
Sbjct: 156 PFGPGFFTFDTMNLVGAVSAAVLGLALHQAAYAAEIVRGGVLAVGGGQLEAASALGIPRL 215

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      +  ++G+ + +++
Sbjct: 216 RQLRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMAIGELFYQVQVVYGRSGRVVPLLM 275

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+  +++    +    A    +
Sbjct: 276 VATAWYILLTTALSIVQYYVERHYAKGAVR 305



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 45/144 (31%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL     T  L F G +    +G ++   RLSA+  +  +   Y+  FR+IP +V + F
Sbjct: 81  VILKAVWLTLQLTFYGTVLGFALGIVLAFMRLSASPFLRTVAYGYIWAFRSIPLIVQLLF 140

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            +        +       P     +   L            +   ++   IV        
Sbjct: 141 WFNLAYLYKELQFGIPFGPGFFTFDTMNLVGAVSAAVLGLALHQAAYAAEIVRGGVLAVG 200

Query: 208 SRHFHEKTGKALPLLYISTFLIFG 231
                  +   +P L     ++  
Sbjct: 201 GGQLEAASALGIPRLRQLRRIVLP 224


>gi|325168661|ref|YP_004280451.1| amino acid ABC transporter transmembrane protein [Agrobacterium sp.
           H13-3]
 gi|325064384|gb|ADY68073.1| amino acid ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 290

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 8/254 (3%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  L   +L+V               ++   L    LT+   A   VF    G ++++ A
Sbjct: 32  IVALALVILTVARNQTVQWGEIPRYMVDPIILDGVVLTLQLTAGAMVFGTAFGCIVAVMA 91

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVS 263
                       KA+ + ++  F   G+P +V I   + +    P++G   + I  + + 
Sbjct: 92  -----TSQNIVLKAIAVAFVWWF--RGVPLIVQIFFWFNIALFIPMVGIGTYSISINDLV 144

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              ++ ++AL  + AA ++EI+R GL AV RGQ EAA +LGL   +  R V+LPQA+R I
Sbjct: 145 TPALAGFLALGLHEAANMSEIIRGGLTAVDRGQREAASSLGLQPLQTLRTVVLPQAIRLI 204

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP  +Q + +LK S++   +G  DL++    I  +    IE++ +    YL ++ + ++
Sbjct: 205 VPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYARNFLVIELLCVASLWYLLITTVASV 264

Query: 384 FMNRLNAKIALKEK 397
             + L   +A K +
Sbjct: 265 GQHFLEKHLAPKGR 278



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G V T  L    M+  T  G +V     S N ++  I   +V  FR +P +V IFF 
Sbjct: 62  ILDGVVLTLQLTAGAMVFGTAFGCIVAVMATSQNIVLKAIAVAFVWWFRGVPLIVQIFFW 121

Query: 149 YKSVLSVLPIPDHSIVL 165
           +   L +  +   +  +
Sbjct: 122 FNIALFIPMVGIGTYSI 138


>gi|149187232|ref|ZP_01865530.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148838768|gb|EDL55707.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 264

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 19/271 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             +++ + ++ +     +  L               +PD+      G +     L    +
Sbjct: 7   KPVLSALIQIALVTVALVWLLDSGAQAMGYRWQWERVPDYLAFYEDGQWWPAELLEGLVV 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    VF+ + G++ +L      +  +   G+ +   Y+    I   P LV I L 
Sbjct: 67  TLKISGLALVFTLLFGLITALL-----KTSNSVVGRGIAHCYVE--GIRNTPLLVQIYLL 119

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +   AL+ +  A+ AEI+R+GL ++P+GQ EA  
Sbjct: 120 YFVF------------GPIIGLDRFSTAVFALALFQGAYTAEILRAGLNSIPKGQFEACR 167

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ++GL+       V+LPQ +R  +PPLT++ ++L+KNSS+   +   DL + G  I+++T 
Sbjct: 168 SVGLSRFYTYYDVILPQVVRRTVPPLTNEIVSLIKNSSIVSVMAIFDLTTEGRNIVSETA 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              EI      IYL L++ ++     L  ++
Sbjct: 228 MPFEIWFTVAAIYLVLTLTLSALSAWLEHRL 258



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 13/130 (10%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
           +  +   +I   L+TV  +W +++    M       G  +  ER         + +  D 
Sbjct: 6   IKPVLSALIQIALVTVALVWLLDSGAQAM-------GYRWQWER-----VPDYLAFYEDG 53

Query: 84  SYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +  A +L G V T  ++   ++   + G +    + S + +   I   YVE  RN P L
Sbjct: 54  QWWPAELLEGLVVTLKISGLALVFTLLFGLITALLKTSNSVVGRGIAHCYVEGIRNTPLL 113

Query: 143 VVIFFLYKSV 152
           V I+ LY   
Sbjct: 114 VQIYLLYFVF 123


>gi|258645825|ref|ZP_05733294.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403195|gb|EEW96742.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 230

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 117/230 (50%), Gaps = 12/230 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N+  ++   +T+  +     F   LG++L+       +    K  +A+  +Y+   +I 
Sbjct: 11  YNDIFMAGAKITIIISFLSCFFGLFLGVILAFM-----KISGVKILQAVAAVYVE--VIR 63

Query: 231 GLPTLVLIALKYQLHFDKPVL-GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P LV I+L +   F  P L  QF NF           +  +AL   + A+  EIVRSG
Sbjct: 64  GTPVLVQISLVF---FGLPFLGIQFPNFEIWGVDFERLSAGVLALILNSGAYQCEIVRSG 120

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ +GQ+EAA++LG +  ++   +++PQA+R+I+P + ++++ L+K SS    +G AD
Sbjct: 121 IQSIHKGQLEAAMSLGFSKWESMVRIIIPQAIRNILPVIGNEFVTLIKESSQVSVIGMAD 180

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+    TI   + Q    ++I    Y  ++  ++  +  L  ++ ++  +
Sbjct: 181 LMYTAATIQGISFQPFPPLVIVAVYYFVMTFFVSSCLRVLEIRLKVRSVR 230



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T  ++F        +G ++   ++S  K++  +  VYVEV R  P LV 
Sbjct: 11  YNDIFMAGAKITIIISFLSCFFGLFLGVILAFMKISGVKILQAVAAVYVEVIRGTPVLVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           I  ++  +  +     +  + 
Sbjct: 71  ISLVFFGLPFLGIQFPNFEIW 91


>gi|227890645|ref|ZP_04008450.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
 gi|227867583|gb|EEJ75004.1| glutamine-binding protein / glutamine transport system permease
           protein [Lactobacillus salivarius ATCC 11741]
          Length = 485

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 13/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ V   +   +  +    L      K  + +    I  F   GLP LVL    Y    
Sbjct: 291 LKLTVVGIIGATIFGILIGMLG-VVPNKFAQGISTTIIYIF--RGLPLLVLALFIYN--- 344

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L         +  P F++  I L+    A+ A  V+ G+ AV +GQMEAA +LGL+
Sbjct: 345 GIPSLTG-------SKIPAFIAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLS 397

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K+ R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L   G  II +  +   I
Sbjct: 398 FGKSMRKVILPQGVKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFRI 457

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             I   +YL +  ++ L    +  +I
Sbjct: 458 WGIIAIMYLLIITILTLLSKWIERRI 483



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A L G V T  L   G+I ATI G L+G   +  NK    I    + +FR +P LV+  
Sbjct: 281 KAFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLAL 340

Query: 147 FLYKSVLSV 155
           F+Y  + S+
Sbjct: 341 FIYNGIPSL 349


>gi|254475048|ref|ZP_05088434.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ruegeria sp. R11]
 gi|214029291|gb|EEB70126.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ruegeria sp. R11]
          Length = 273

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               R S  F+ +  + +P++ +  ++ F L P LV +       F    +   NF    
Sbjct: 82  WLVIRQSARFYIEVVRGIPIIVLLLYVAFVLAPALVELRNWIGAQFGLDPIRTRNF---- 137

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
              P      IAL    +AFI+E+ R+GL +V  GQ+EAA ALGL   +  R ++ PQA+
Sbjct: 138 ---PLLWRAIIALMIAYSAFISEVFRAGLQSVDEGQIEAAKALGLNRWQRFRFIVFPQAI 194

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+PPL + ++ L+K+SSL   +G AD+  +G        +  E   +   IYL+L+I 
Sbjct: 195 RTILPPLGNDFVALVKDSSLVSVLGVADVTQLGKITAVGNFRYFETYNVVALIYLTLTIG 254

Query: 381 IALFMNRLNAKIALKE 396
           ++L + RL   +  ++
Sbjct: 255 LSLALRRLEKHLRSRQ 270


>gi|270307788|ref|YP_003329846.1| amino acid ABC transporter, permease protein [Dehalococcoides sp.
           VS]
 gi|270153680|gb|ACZ61518.1| amino acid ABC transporter, permease protein [Dehalococcoides sp.
           VS]
          Length = 273

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 124/253 (49%), Gaps = 14/253 (5%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
             L          ++ F          +  + +     + V S+ L ++  LF   L R 
Sbjct: 28  WWLVAGVFALAGGLMLFKPDPFLDIFKYVWVGIGITVLVAVVSYFLMLIFGLFG-ALGRL 86

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-------FNFIGGSTVS 263
                 + L   Y+   ++ G+P LV +   Y   F  PV+ Q       F  +     +
Sbjct: 87  SKNTILRGLATFYVE--IVRGIPLLVQLIWWY---FAFPVIIQSIGQGLNFGPMMNYQAN 141

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  M+++  ++    A+++EI R+G+ ++P+GQMEAA +LG++H +A R V+LPQA+R +
Sbjct: 142 PIVMAIW-GMTFCYGAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFVILPQALRVV 200

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP+ +++++LLK++SL   V  AD+V +G          IE+  +   +YL L+++ + 
Sbjct: 201 LPPMGNEFISLLKDTSLVSTVAVADMVRLGREFTATNFNPIEVWSMIALLYLILTLLSSR 260

Query: 384 FMNRLNAKIALKE 396
            +N +  K A   
Sbjct: 261 LINYIEKKTAFSR 273



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 2/119 (1%)

Query: 70  FEIDQGIVPYTSDS--SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           F +  G++ +  D        + VG   T  +A        I G     GRLS N ++  
Sbjct: 35  FALAGGLMLFKPDPFLDIFKYVWVGIGITVLVAVVSYFLMLIFGLFGALGRLSKNTILRG 94

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           +   YVE+ R IP LV + + Y +   ++      +     M      +      M   
Sbjct: 95  LATFYVEIVRGIPLLVQLIWWYFAFPVIIQSIGQGLNFGPMMNYQANPIVMAIWGMTFC 153


>gi|154684846|ref|YP_001420007.1| YckJ [Bacillus amyloliquefaciens FZB42]
 gi|154350697|gb|ABS72776.1| YckJ [Bacillus amyloliquefaciens FZB42]
          Length = 229

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 113/229 (49%), Gaps = 15/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +        +  +  +  + + SF+ G++++L  T L+R  + K  + +  +Y+S  
Sbjct: 12  WDLVQQSFWPILSGGIYYSIPLTILSFIFGMIIALI-TALARMSNMKPLRWVFSVYVSA- 69

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            + G P LV + + + L           F   +     F S  IA S    A+ +EI+R+
Sbjct: 70  -VRGTPLLVQLFIIFYL-----------FPTFNITLDPFPSAVIAFSLNVGAYASEIIRA 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VP+GQ EA   +G+T+RK    V+LPQA R  IPPL++ +++L+K++SLA  +  A
Sbjct: 118 SISSVPKGQWEAGYTIGMTYRKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVA 177

Query: 348 DLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      I  Q   Q + I +   FIY  +  ++++  + +  ++   
Sbjct: 178 ELFRKAQEIGAQNLDQILVIYIEAAFIYWIICFLLSIVQHVIERRLDRY 226



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 75  GIVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             +P+     S+   +  G   +  L     I   II  +    R+S  K + W+  VYV
Sbjct: 8   TAIPWDLVQQSFWPILSGGIYYSIPLTILSFIFGMIIALITALARMSNMKPLRWVFSVYV 67

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
              R  P LV +F ++    +     D          LN
Sbjct: 68  SAVRGTPLLVQLFIIFYLFPTFNITLDPFPSAVIAFSLN 106


>gi|205372795|ref|ZP_03225605.1| amino acid ABC transporter (permease) [Bacillus coahuilensis m4-4]
          Length = 230

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 107/219 (48%), Gaps = 14/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      +  +  + + SFV+G+ L+L         +    + +  +Y+S   I G P L
Sbjct: 22  MPMLKGALYYSIPLTLSSFVIGMALALLTALAR-LSNVSIFRGIARVYVSA--IRGTPLL 78

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +                       F S  IA S    A+ +EIVR+ + ++P+G
Sbjct: 79  VQLFIIFY-----------GLPNLGLNIDSFPSAVIAFSLNVGAYASEIVRASIESIPKG 127

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  ++G+T+R+  + ++LPQA R  IPPL++ +++L+K++SLA  V  A++      
Sbjct: 128 QWEAGYSVGMTYRQTLKRIVLPQAARVSIPPLSNTFISLVKDTSLASLVLVAEMFRKAQE 187

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I     Q + + +   F+Y  +  ++++  +R+  +++ 
Sbjct: 188 IAATNYQFLLVYMEAAFLYWVICFILSIAQDRIEIRLSR 226


>gi|292487229|ref|YP_003530101.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900396|ref|YP_003539765.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291200244|emb|CBJ47372.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552648|emb|CBA19693.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
 gi|312171330|emb|CBX79589.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 227

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + +F LG+ L +    L+R +  +  + L   Y+  +LI G P 
Sbjct: 12  FWPMLYAGLTFTIPLTLIAFTLGLSLGIVV-ALARLYGPRPLQNLVRFYV--WLIRGTPL 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +               G       F +  I  +    A+ +EI+R+ L++VP+
Sbjct: 69  LVQLFLIFY-----------ALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G++  +  R +++PQA R  +PPL++ ++ L+K++SLA  +   +L     
Sbjct: 118 GQWEAAHSIGMSWGQTLRRIIMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I   T Q + +      IYL LS +++    RL  K+A
Sbjct: 178 RIAAVTYQPLILYTEAAIIYLLLSSVLSALQARLEKKLA 216



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G   T  L          +G +V   RL   + +  + R YV + R  P L
Sbjct: 10  DSFWPMLYAGLTFTIPLTLIAFTLGLSLGIVVALARLYGPRPLQNLVRFYVWLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++ ++  V    D       G  LN
Sbjct: 70  VQLFLIFYALPGVGITIDAFPAAVIGFTLN 99


>gi|323700540|ref|ZP_08112452.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323460472|gb|EGB16337.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 292

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 8/254 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++  L   +++   +      +    F +   +     T+       +   +LG+V ++ 
Sbjct: 21  ILIALLGLIVNAFIVGQIDWPVVGKFFFSPALIRGLGNTILITVCSMIVGLILGVVFAVM 80

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTV 262
                R       +    LYI  F   G P  + + + + L    P++   F       V
Sbjct: 81  -----RLSKNPVTRWFSGLYIWLF--RGTPVYLQLLIWFNLALIFPIVNLGFAEYRMVDV 133

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F++    L     A++ EIVRSG+++V +GQ++AA  LG+T   A R ++LPQAMR 
Sbjct: 134 MTPFVAALFGLGLNEGAYMTEIVRSGILSVDKGQVDAATTLGMTRLTAMRRIVLPQAMRV 193

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PP+ ++++ LLK SS+A A+ F +L+     I     + +E++++    YL +  +++
Sbjct: 194 IVPPVGNEFIGLLKTSSMASAIAFTELLHRAQLIYFVNAKVMELLIVATGWYLIVVTLLS 253

Query: 383 LFMNRLNAKIALKE 396
            F   +  +     
Sbjct: 254 FFQVGIERRFNRGH 267



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A++ G  NT  +    MI   I+G +    RLS N +  W   +Y+ +FR  P  + +  
Sbjct: 51  ALIRGLGNTILITVCSMIVGLILGVVFAVMRLSKNPVTRWFSGLYIWLFRGTPVYLQLLI 110

Query: 148 LYKSVLSVLP 157
            +   L    
Sbjct: 111 WFNLALIFPI 120


>gi|300214383|gb|ADJ78799.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus salivarius CECT 5713]
          Length = 485

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 13/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ V   +   +  +    L      K  + +    I  F   GLP LVL    Y    
Sbjct: 291 LKLTVVGIIGATIFGILIGMLG-VVPNKFAQGISTTIIYIF--RGLPLLVLALFIYN--- 344

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L         +  P F++  I L+    A+ A  V+ G+ AV +GQMEAA +LGL+
Sbjct: 345 GIPSLTG-------SKIPAFIAGIITLTLNEGAYTAAFVKGGIEAVDKGQMEAARSLGLS 397

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K+ R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L   G  II +  +   I
Sbjct: 398 FGKSMRKVILPQGVKIMIPSFINQFIITLKDTSILSIIGILELTQTGKIIIARNLEGFRI 457

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             I   +YL +  ++ L    +  +I
Sbjct: 458 WGIIAIMYLLIITILTLLSKWIERRI 483



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A L G V T  L   G+I ATI G L+G   +  NK    I    + +FR +P LV+  
Sbjct: 281 KAFLDGIVETLKLTVVGIIGATIFGILIGMLGVVPNKFAQGISTTIIYIFRGLPLLVLAL 340

Query: 147 FLYKSVLSV 155
           F+Y  + S+
Sbjct: 341 FIYNGIPSL 349


>gi|300719077|ref|YP_003743880.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299064913|emb|CAX62033.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 507

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL    L +         ++ V +   G+++  F   L+        +    +YI  +++
Sbjct: 4   FLKYLTLPYLWQGAVIALELLVGALAGGVIIGFFL-ALASTSRHWIIRFPVQVYI--YIL 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y       VL QF           F+S  +AL     AF AEI+R G+
Sbjct: 61  RGTPVLLQLILLYN------VLPQFGL-----RFSPFLSALLALMINETAFCAEIIRGGI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A  R Q  AA A G +  K    V++PQA+R+I+P + ++ + LLK++SLA  VG  +L
Sbjct: 110 LATDRNQRTAAQAFGYSRTKEMIHVVIPQALRAILPTMGNEAVGLLKSTSLASVVGVNEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G TI++Q    I +++    IY+ LS ++A     L     L++
Sbjct: 170 TMRGQTIVSQNFLFIPVLVASGGIYMILSSLLAGGQWWLERHYNLED 216



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 33/101 (32%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V    L    +    IIG  +     S + ++ +  +VY+ + R  P L+ +  
Sbjct: 12  YLWQGAVIALELLVGALAGGVIIGFFLALASTSRHWIIRFPVQVYIYILRGTPVLLQLIL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           LY  +          +     + +N        +     A 
Sbjct: 72  LYNVLPQFGLRFSPFLSALLALMINETAFCAEIIRGGILAT 112


>gi|269120912|ref|YP_003309089.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614790|gb|ACZ09158.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 265

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 16/237 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS-------RHFHEKT 215
            V  F     N+ LS    T+  +    +  F +G+ ++L             + F  K 
Sbjct: 14  WVAFFIEKNGNQFLSGTITTLYISLTGTIVGFFIGLCVALVREAYIDEKTPVIKKFFIKL 73

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            + +  +YI+ F   G P +V   + Y   +  PVL Q        +     +    +S 
Sbjct: 74  SQIIIKIYIAVF--RGTPMIVQAMVIY---YGLPVLLQRFDFNLDPIP----AALFIVSI 124

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T +++AEI+R G+ +V +GQ+E A A+G++H +  + ++ PQA+R+++P + ++++  +
Sbjct: 125 NTGSYMAEIIRGGIDSVDKGQLEGAQAIGMSHFQTMKSIIFPQAIRNVLPSVGNEFIINI 184

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++S+   +   +L     ++     +  E+ +I   IY  L+  I+L +  +  KI
Sbjct: 185 KDTSVLNVISVTELFFTSKSLAGTYTRYYEVFIITSAIYFFLTFTISLILRFVEKKI 241


>gi|261822750|ref|YP_003260856.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261606763|gb|ACX89249.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 254

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 15/239 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FG 231
            +    +T+       +     G+ L L     + H   K      + +     I    G
Sbjct: 16  FMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQWPVRIYISAFRG 75

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAA 279
            P  V I + +       +  +   +  S +               F+S  +A++    A
Sbjct: 76  TPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVAITLNAGA 135

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI R+G+ ++ RGQMEA+ +LG+++ +  R V+LPQA R ++PPL +  + ++K+SS
Sbjct: 136 YVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAIAIVKDSS 195

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA A+G ADL     T+        E  L    +Y  ++ +++L +  +  +    + +
Sbjct: 196 LASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLVRHMEMRFGKSDSR 254



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVY 132
             YA   + G   T       +I  T  G  +G GRL+              V W  R+Y
Sbjct: 10  QEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGVQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +  FR  P  V I  ++ +++ +   P   +++   +   +   +  +      + +   
Sbjct: 70  ISAFRGTPLFVQIMVVHFALVPLFINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|76808570|ref|YP_333373.1| amino acid ABC transporter permease [Burkholderia pseudomallei
           1710b]
 gi|124383656|ref|YP_001026395.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia mallei NCTC 10229]
 gi|134282373|ref|ZP_01769078.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|254178565|ref|ZP_04885220.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|254206196|ref|ZP_04912548.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei JHU]
 gi|254297764|ref|ZP_04965217.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|254358594|ref|ZP_04974867.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei 2002721280]
 gi|76578023|gb|ABA47498.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 1710b]
 gi|124291676|gb|ABN00945.1| cystine ABC transporter, permease protein [Burkholderia mallei NCTC
           10229]
 gi|134246411|gb|EBA46500.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|147753639|gb|EDK60704.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei JHU]
 gi|148027721|gb|EDK85742.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei 2002721280]
 gi|157807961|gb|EDO85131.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|160699604|gb|EDP89574.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei ATCC 10399]
          Length = 230

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L           K  V S + G+V ++    L      +    L   Y+S  ++ G P
Sbjct: 20  QSLPVLLQGALLTVKFAVLSMLFGLVGAVAL-ALMGIGRSRVLAGLARAYVS--VMRGTP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + 
Sbjct: 77  LLVQIFVVY---YGLPSL-------GVSLDPT-PAGVIALSANVAAYMSESMRGAINGID 125

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 126 KGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSA 185

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             II  T Q + + L    +Y  L  ++         ++AL  + 
Sbjct: 186 QEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYERRLALPSRH 230



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   +    +    +  ++++A + R YV V R  P LV IF 
Sbjct: 24  VLLQGALLTVKFAVLSMLFGLVGAVALALMGIGRSRVLAGLARAYVSVMRGTPLLVQIFV 83

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 84  VYYGLPSL 91


>gi|30018609|ref|NP_830240.1| cystine transport system permease protein [Bacillus cereus ATCC
           14579]
 gi|296501181|ref|YP_003662881.1| cystine transport system permease [Bacillus thuringiensis BMB171]
 gi|29894150|gb|AAP07441.1| Cystine transport system permease protein [Bacillus cereus ATCC
           14579]
 gi|296322233|gb|ADH05161.1| cystine transport system permease protein [Bacillus thuringiensis
           BMB171]
          Length = 230

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VLG ++ L      R  + K   ++  +YI   +I G P +V IA+ Y  
Sbjct: 18  VTLQLTLTSLVLGSLIGLL-FAFFRISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V   F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG
Sbjct: 73  ----------FGITSVVVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G +I     Q +
Sbjct: 123 MPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I    YL L ++   F+N L  ++  KE
Sbjct: 183 DTYIIVGAYYLILVLLFTYFVNLLEKRLQRKE 214



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|293192922|ref|ZP_06609766.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Actinomyces odontolyticus F0309]
 gi|292819978|gb|EFF78977.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Actinomyces odontolyticus F0309]
          Length = 320

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 117/268 (43%), Gaps = 14/268 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLS 201
               +  ++L+ +          F   + ++ L   ++       I   + + V+G  L+
Sbjct: 22  WASAIVAAILAAMVAHALVTNANFQWQVVSQWLFSRSILQGVLFTIILTILAMVVGTALA 81

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA---------LKYQLHFDKPVLG 252
           +    + R       + + + YI  F    + T ++           L + + F   + G
Sbjct: 82  I-TMAIMRQSVNPVLRWVAMAYIWFFRGTPIYTQLIFWSLLPTLYPKLSFGVPFLGSLWG 140

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                  +T    F   +I L     A++AEI+R+GL++VP+GQ EAA ALG+      R
Sbjct: 141 WELTFDTATYFTPFWMAFIGLGLNEGAYLAEIMRAGLLSVPKGQWEAATALGMPRGTIFR 200

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR I+PP+ ++ +++LK +SL  A+ F  +L  +       T   + +++   
Sbjct: 201 RIILPQAMRVIVPPIGNETISMLKTTSLVSAIPFTLELTFIARQRGQATFAPVPLLIAAA 260

Query: 372 FIYLSLSIMIALFMNRLNAKIALK-EKK 398
             YL ++ ++    + +        E++
Sbjct: 261 IWYLVITSLLMWIQSFIEKYYGKGFERR 288



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 48/138 (34%), Gaps = 3/138 (2%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S   ++ +IL G + T  L    M+  T +   +   R S N ++ W+   Y+  FR  P
Sbjct: 51  SQWLFSRSILQGVLFTIILTILAMVVGTALAITMAIMRQSVNPVLRWVAMAYIWFFRGTP 110

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
               + F     L     P  S  +PF   L    L+F T T  T   +      L    
Sbjct: 111 IYTQLIFW---SLLPTLYPKLSFGVPFLGSLWGWELTFDTATYFTPFWMAFIGLGLNEGA 167

Query: 201 SLFATRLSRHFHEKTGKA 218
            L     +       G+ 
Sbjct: 168 YLAEIMRAGLLSVPKGQW 185


>gi|301155428|emb|CBW14894.1| predicted transporter subunit: membrane component of ABC
           superfamily [Haemophilus parainfluenzae T3T1]
          Length = 238

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP                        T+      F     + +++++  T
Sbjct: 1   MTLLNNWLASLPFMTAERADYVISSFWPMMEGAILYTIPLAVISFFCGLFIAVIVAVICT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
               +   K  + +   YIS  +I G P LV I + +                       
Sbjct: 61  LPHPNLMTKILQGICRTYIS--IIRGTPMLVQIFIIFY-----------GLPEVGIKLEP 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ ++A+P+GQ EA+ A+G+ + +A    ++PQA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASILAIPKGQWEASYAIGMNYTQAFVRTIMPQALRISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +++ +K++SLA  V  A+L  V   I  +  + I I      IY     ++++  
Sbjct: 168 SLSNTFISTVKDTSLASLVWIAELFRVAQNITAENYEFILIYSEAALIYWVFCFVLSMGQ 227

Query: 386 NRLNAKIAL 394
            RL  +++ 
Sbjct: 228 TRLEKRLSR 236


>gi|228970534|ref|ZP_04131184.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228789121|gb|EEM37050.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
          Length = 230

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VLG ++ L      R  + K   ++  +YI   +I G P +V IA+ Y  
Sbjct: 18  VTLQLTLTSLVLGSLIGLL-FAFFRISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V   F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG
Sbjct: 73  ----------FGITSVVVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G +I     Q +
Sbjct: 123 MPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I    YL L ++   F+N L  ++  KE
Sbjct: 183 DTYIIVGAYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|160936725|ref|ZP_02084092.1| hypothetical protein CLOBOL_01616 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440516|gb|EDP18261.1| hypothetical protein CLOBOL_01616 [Clostridium bolteae ATCC
           BAA-613]
          Length = 171

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 66/137 (48%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           G       F S  +  S  T A+ +E +R+ + AVP GQ+EA   +GL++ +    ++LP
Sbjct: 34  GLGITLDAFPSAVVVFSVNTGAYASETIRAAIEAVPAGQLEAGYCVGLSYTQTMMRIILP 93

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R   PPL++  + L+K++SLA  +   ++      I  +T +   +      IYL  
Sbjct: 94  QALRIAFPPLSNSLIGLVKDTSLAANITVMEMFMSAQRIAARTYEPFALYREVGIIYLIF 153

Query: 378 SIMIALFMNRLNAKIAL 394
              +    +    K+ L
Sbjct: 154 CTALTRLQSVWEQKLRL 170


>gi|258543772|ref|ZP_05704006.1| L-cystine ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258521008|gb|EEV89867.1| L-cystine ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 267

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 13/252 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V    ++ ++  LP    + V   G       ++    ++      F+   ++ ++++L 
Sbjct: 26  VFIIGWRELIGSLPFMSEARVTLVGNAFRPMLIAAVLYSIPLAVVAFIIGLIIALLVALV 85

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
               +     +   A+   Y+S   I G P LV + + +                     
Sbjct: 86  RVVPATGIAHRLLLAVVHAYVSA--IRGTPMLVQLMIVFY-----------GLPAVGITL 132

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
               +  I  S    A+ +E VR+ +++VPRGQ EA   +G+T+ +  R ++LPQA+R  
Sbjct: 133 DPLPTAIIGFSLNVGAYASETVRAAILSVPRGQWEAGFTIGMTYLQTFRRIILPQALRVS 192

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL++ ++ L K +SLA  V   +L      I N +   + + +    +Y      ++L
Sbjct: 193 VPPLSNSFIGLFKETSLASTVTITELFRAAQQIANASYDFLPVYIEAALVYWIFCFGLSL 252

Query: 384 FMNRLNAKIALK 395
             +RL  ++   
Sbjct: 253 AQSRLERRLDRY 264


>gi|159185731|ref|NP_357188.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
 gi|159140865|gb|AAK89973.2| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium
           tumefaciens str. C58]
          Length = 603

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 114/266 (42%), Gaps = 11/266 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +  +  +  +   + SV   P     +    F     L     T+   A   +F FV
Sbjct: 41  LRTVGTVFSVLVIAAVLHSVFGNPRWGWDVFAEWFFAEPVLVGLGRTLLLTALGALFGFV 100

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL----KYQLHFDKPVL 251
           LG +L+L     +R        A+   YI  F    L  L+LI       Y+        
Sbjct: 101 LGTLLAL-----ARVSRSPLLVAVSWTYIWIFRSIPLIVLLLILNNLGYLYETVTIGVPY 155

Query: 252 GQFNFIGGST--VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              NFI  +T  +   F +  + L+   AAF +EIVR G+++V +GQ+EAA ALGL  R+
Sbjct: 156 TGINFISWNTTQLMTPFAAAILGLTLNQAAFASEIVRGGILSVDQGQLEAAAALGLPRRR 215

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQAMRSI+P   +  + L K +S    +   +L      I  +  + I ++++
Sbjct: 216 QASRIILPQAMRSILPTAFNDIIGLAKGTSQVYILALPELFYTIQIIYRRNLEVIPLLMV 275

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               YL +   +++  + +    +  
Sbjct: 276 ATVWYLVILTALSIVQHHIERHFSRG 301



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 1/113 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-PLVVIFFL 148
           LVG   T  L   G +   ++GTL+   R+S + L+  +   Y+ +FR+IP  ++++   
Sbjct: 81  LVGLGRTLLLTALGALFGFVLGTLLALARVSRSPLLVAVSWTYIWIFRSIPLIVLLLILN 140

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
               L               +  N   L  P         +   +F   IV  
Sbjct: 141 NLGYLYETVTIGVPYTGINFISWNTTQLMTPFAAAILGLTLNQAAFASEIVRG 193


>gi|87122516|ref|ZP_01078395.1| ABC basic amino acid transporter, inner membrane subunit
           [Marinomonas sp. MED121]
 gi|86162158|gb|EAQ63444.1| ABC basic amino acid transporter, inner membrane subunit
           [Marinomonas sp. MED121]
          Length = 223

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 5/212 (2%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                 + ++   S VLG + +L    L+R         LP  YI  F   G P LV I 
Sbjct: 1   MQGTWVSLQLIFLSVVLGGIFAL-PIALARISKNPLISGLPFAYIFFF--RGTPLLVQIF 57

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L Y       V+ +        +   F    IA +  T+A+ AEI R  + A+P G++EA
Sbjct: 58  LVYYGASQFEVVRESFL--WPILREPFWCAIIAFTLNTSAYTAEIFRGAIQAIPVGEVEA 115

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
              +G+T  +  R +LLP+A   ++P   ++ + +LK S+LA  +   DL  +  TII +
Sbjct: 116 CKVVGMTKVQMYRRILLPRAFGIVLPAYGNEIILMLKGSALASTITILDLTGMARTIIAR 175

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T   IEI L    IYL +S+++     ++  +
Sbjct: 176 TYTPIEIFLAAGAIYLVISMVVIAIFKQVEKR 207



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   +  L F  ++   I    +   R+S N L++ +   Y+  FR  P LV IF +Y
Sbjct: 1   MQGTWVSLQLIFLSVVLGGIFALPIALARISKNPLISGLPFAYIFFFRGTPLLVQIFLVY 60

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
                   + +  +            ++F   T    A+IF
Sbjct: 61  YGASQFEVVRESFLWPILREPFWCAIIAFTLNTSAYTAEIF 101


>gi|242309543|ref|ZP_04808698.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
 gi|239524114|gb|EEQ63980.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
          Length = 237

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 120/228 (52%), Gaps = 19/228 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-------LLYI 224
               L     ++ T A   +   VLG+V++L    L+  +  +  +AL        + Y 
Sbjct: 18  YKYILEGLIFSISTTALAAIIGIVLGVVVALMQ--LTNFYPFRNIQALANFNPLSKIAYA 75

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             ++I G P +V + +   + F          IG     P  +   IA    ++A++AEI
Sbjct: 76  YVYIIRGTPAVVQLMIWANIIF----------IGALRDMPILLIAAIAFGINSSAYVAEI 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ ++ +GQMEAA ALG+ +  + + +++PQA++ I+PPL S+++ LLK +S+   +
Sbjct: 126 IRAGIQSLDKGQMEAARALGMGYAMSMKEIIIPQAIKRILPPLVSEFIALLKETSIVGFI 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     I +QT +AIE +L    IYL L+ + A+ M ++  ++
Sbjct: 186 GGVDLLRSASIITSQTYRAIEPLLAVGIIYLILTSLFAMLMRKVEKRL 233


>gi|160899042|ref|YP_001564624.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160364626|gb|ABX36239.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 349

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 31/242 (12%)

Query: 187 AKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA- 239
                 + +LG++L + A       R +   +    + +PLL       F L +L+    
Sbjct: 108 VPALALATMLGLLLGVAAVARHPLLRGAVRLYVDVARNIPLLVQVLLWYFALTSLLPDVD 167

Query: 240 -------LKY-----------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
                  L +                   H+  P  G F+  GG  ++PEF++L  AL  
Sbjct: 168 HPLAIGPLGFLSKAGLALPGPVYDSAAGWHWSSPQPGMFSIDGGLALTPEFLALVGALGL 227

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y AA+ AEIVR+GL AVPRGQ  AA ALG+   +  RLV+LPQA+R IIPP T+  L+ +
Sbjct: 228 YAAAYCAEIVRAGLQAVPRGQWNAASALGMRRGQQLRLVVLPQALRVIIPPYTNLALSTI 287

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           KNSSLAVA+G+ D+V V  T ++QTGQAIE + I   +YL+++++ +L +N  N + A  
Sbjct: 288 KNSSLAVAIGYPDVVMVANTAMSQTGQAIECVTIIAVVYLAINLLTSLALNAFNQRSAFI 347

Query: 396 EK 397
            +
Sbjct: 348 TR 349



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/168 (32%), Positives = 89/168 (52%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R   +++Q+ +  LL ++  W  +N   NM    ++ G GFL + AGF I +G++PY  
Sbjct: 29  PRWGRLALQLAIGWLLILLLGWLAHNASRNMAARGIAGGFGFLEQTAGFSISEGLLPYEP 88

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             SY  A+  G  NT   A   +  AT++G L+G   ++ + L+    R+YV+V RNIP 
Sbjct: 89  GDSYLRAVAAGVANTVRAAVPALALATMLGLLLGVAAVARHPLLRGAVRLYVDVARNIPL 148

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           LV +   Y ++ S+LP  DH + +    FL+  GL+ P    D+ A  
Sbjct: 149 LVQVLLWYFALTSLLPDVDHPLAIGPLGFLSKAGLALPGPVYDSAAGW 196


>gi|317491047|ref|ZP_07949483.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920594|gb|EFV41917.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 254

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 105/234 (44%), Gaps = 15/234 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY---ISTFLIFGLPTLV 236
            +T+       +   + G+ L L     + +   +      + +   +      G P  V
Sbjct: 21  WMTIKCTIICVILGTLWGLTLGLGRMAKAENGPWRIVLRYFVQWPVRVYVSAFRGTPLFV 80

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPE------------FMSLYIALSCYTAAFIAEI 284
            I + +       +  +   +  S +               F+S  +A++    A+++EI
Sbjct: 81  QIMVVHFALVPLLINPRDGVLVTSGLMSADFARMLRSDYGAFLSCIVAITLNAGAYVSEI 140

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++  GQMEA+ ALG++  K  R V+LPQA R I+PPL +  + ++K+SSLA A+
Sbjct: 141 FRAGIQSIDHGQMEASRALGMSWGKTMRKVILPQAFRRILPPLGNNAIAIVKDSSLASAI 200

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ADL     T+        E  L    IY  L+ +++L +  +  +++  + +
Sbjct: 201 GLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILSLLVQHMEKRLSKSDSR 254



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVY 132
             YA     G   T       +I  T+ G  +G GR++              V W  RVY
Sbjct: 10  QEYAPLFAEGAWMTIKCTIICVILGTLWGLTLGLGRMAKAENGPWRIVLRYFVQWPVRVY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V  FR  P  V I  ++ +++ +L  P   +++  G+   +      +      + I   
Sbjct: 70  VSAFRGTPLFVQIMVVHFALVPLLINPRDGVLVTSGLMSADFARMLRSDYGAFLSCIVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|225075327|ref|ZP_03718526.1| hypothetical protein NEIFLAOT_00330 [Neisseria flavescens
           NRL30031/H210]
 gi|224953502|gb|EEG34711.1| hypothetical protein NEIFLAOT_00330 [Neisseria flavescens
           NRL30031/H210]
          Length = 238

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F    ++ + ++L     S    +K    L   YIS  +I G P LV + + + 
Sbjct: 37  PLAIASFAIGMIIAVAVALVRIMPSGGIFQKCLLKLVEFYIS--VIRGTPLLVQLVIVFY 94

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 95  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 143

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 144 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 203

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 204 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235


>gi|269214286|ref|ZP_06158476.1| L-cystine ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
 gi|269210117|gb|EEZ76572.1| L-cystine ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
          Length = 227

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 FV   ++ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 26  PLAIASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYIS--VIRGTPLLVQLVIVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 84  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 133 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 193 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224


>gi|307693268|ref|ZP_07635505.1| polar amino acid ABC transporter, inner membrane subunit
           [Ruminococcaceae bacterium D16]
          Length = 245

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 117/253 (46%), Gaps = 8/253 (3%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
                  +   P P   I   F        +     T+  +    + + +  ++L+L   
Sbjct: 1   MLESFLQMFTNPGPASFINFTFLPKYTFYFVQGVKYTLMLSVVAVLLAVIPALLLALMRL 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             SR     +G  +        +    P LV + + Y   F    + +    G   +   
Sbjct: 61  SKSRIVRWISGAYIA-------IFRSTPMLVQLYIIYLGVFSFIEVPKMTIFGFLRLD-L 112

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   +AL+  ++A++AEI R+G++AV  GQ EAA +LGL+  ++ RLV+LPQA+++++P
Sbjct: 113 FIPSVVALALNSSAYVAEIFRAGILAVDAGQTEAARSLGLSSWQSMRLVVLPQAVKNVLP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L ++ + ++K SS+   +G  DL+    T+I  +  A+  +++   IY  ++   +  +
Sbjct: 173 ALANEVVTMVKESSICSVIGVYDLMWGAKTVITNSYIAVGPLVLAAIIYFCINFPASKAI 232

Query: 386 NRLNAKIALKEKK 398
             +  ++   +K+
Sbjct: 233 EAIERRMRRGDKR 245



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
             + +T    Y    + G   T  L+   ++ A I   L+   RLS +++V WI   Y+ 
Sbjct: 16  SFINFTFLPKYTFYFVQGVKYTLMLSVVAVLLAVIPALLLALMRLSKSRIVRWISGAYIA 75

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +FR+ P LV ++ +Y  V S + +P  +I     + L    +    L           + 
Sbjct: 76  IFRSTPMLVQLYIIYLGVFSFIEVPKMTIFGFLRLDLFIPSVVALALNSSAYVAEIFRAG 135

Query: 195 VLGI 198
           +L +
Sbjct: 136 ILAV 139


>gi|78356431|ref|YP_387880.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218836|gb|ABB38185.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 337

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 5/208 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S V GI   +    L+R       K   + YI   LI G P LV I L Y 
Sbjct: 132 WVTLEVSLISIVFGITFGVLTG-LARISENPALKWGAITYIE--LIRGSPLLVQIFLWYF 188

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     ++       G    P      +ALS +T A++AEIVR+G+ +V RGQMEAA +L
Sbjct: 189 V--AGTLVNNLLMQAGLGQVPPMWFGVLALSVFTGAYVAEIVRAGIQSVHRGQMEAARSL 246

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +A R V+LPQA R I+PPL  Q+++L+K+SSL   +   +L      +++ + Q 
Sbjct: 247 GLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIRELTKATREVVSSSLQP 306

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E+ ++   +YL L+  ++LF++ L  K
Sbjct: 307 FELWILCAVLYLLLTFTLSLFVSYLENK 334



 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++   ++     G L G  R+S N  + W    Y+E+ R  P LV IF 
Sbjct: 126 VLLQGLWVTLEVSLISIVFGITFGVLTGLARISENPALKWGAITYIELIRGSPLLVQIFL 185

Query: 148 LYKS 151
            Y  
Sbjct: 186 WYFV 189


>gi|282601295|ref|ZP_06257979.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Subdoligranulum variabile DSM 15176]
 gi|282569527|gb|EFB75062.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Subdoligranulum variabile DSM 15176]
          Length = 224

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 110/221 (49%), Gaps = 10/221 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+    T+        F+ +LG++  L +   +R              +S   +  +  +
Sbjct: 13  LTAMGQTLLLALCGLFFACILGLIFGLLSVVKNR----------ACNIVSIIFVDAIRGV 62

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I L Y ++F  P L       G        +  + L+    A++AEI+R+G+ +V +G
Sbjct: 63  PMIVLAYFIYFGIPYLLNTILGFGGVTLTALQAGTVCLALNCGAYMAEIIRAGIESVDKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL + +A   V+LPQA+R++IP + +Q++  LK++S+   +GF +LV+    
Sbjct: 123 QMEAARSLGLPYWRAMVRVVLPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKN 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++  +  + ++  I   +YL +  ++++   ++  ++    
Sbjct: 183 VVANSFMSFQVWAIVAVMYLIVITILSVLAKQMERRLNRGR 223



 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 34/70 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L     T  LA  G+  A I+G + G   +  N+    +  ++V+  R +P +V
Sbjct: 7   TYGGLLLTAMGQTLLLALCGLFFACILGLIFGLLSVVKNRACNIVSIIFVDAIRGVPMIV 66

Query: 144 VIFFLYKSVL 153
           + +F+Y  + 
Sbjct: 67  LAYFIYFGIP 76


>gi|229056201|ref|ZP_04195627.1| Amino acid ABC transproter, permease [Bacillus cereus AH603]
 gi|228721135|gb|EEL72667.1| Amino acid ABC transproter, permease [Bacillus cereus AH603]
          Length = 230

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +    +      L    +T+       VF  ++G++ + F     R  + K   ++  +Y
Sbjct: 1   MFEIFISTYPTLLKATIVTLQLTLTSLVFGSLIGLLFAFF-----RISNNKILNSIAHVY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   +I G P +V IA+ Y              I    V   F +  IAL+ +  A+I E
Sbjct: 56  I--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWAGAIALAIHNGAYITE 101

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   
Sbjct: 102 IFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAY 161

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           VG ++L   G +I     Q ++  +I    YL+L ++    ++ L  ++  KE
Sbjct: 162 VGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLLEKRLQRKE 214



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVFGSLIGLLFAFFRISNNKILNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|326382647|ref|ZP_08204338.1| abc transporter integral membrane subunit [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326198766|gb|EGD55949.1| abc transporter integral membrane subunit [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 313

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 13/270 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           + +   V++  +   V      P +            R LS    T+       +   VL
Sbjct: 27  QWVAAAVILVLVALFVYGAATNPAYHWSTYGKYLFEERILSGVGYTLALTVLAMIIGVVL 86

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQLHFDKPVLGQFN 255
           G++L++      R    +   A   +Y+  F    +   LVL  L   ++    V   F 
Sbjct: 87  GVILAVM-----RMSPNRVLSATAWVYLWVFRGTPVYVQLVLWGLVGSIYKTVSVGIPFG 141

Query: 256 F------IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                  I   ++   F+   I L+   AA++AEIVR+G+ +V  GQMEA++ALG++  +
Sbjct: 142 PTAFEIDIQQLSLEYVFVLAVIGLALNEAAYMAEIVRAGISSVGEGQMEASVALGMSWWQ 201

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL 368
             R  +LPQAMR IIPP  ++ +++LK +SL  AV F+ +L      I     Q I ++L
Sbjct: 202 TMRRTVLPQAMRVIIPPTGNEVISMLKTTSLVAAVPFSLELYGRSRDISGVNFQPIPMLL 261

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    YL ++ ++ +  + +         +
Sbjct: 262 VASTWYLVVTSILMVGQHFVEKHYEKGASR 291



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 83  SSYATAI-----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           S+Y   +     L G   T  L    MI   ++G ++   R+S N++++    VY+ VFR
Sbjct: 54  STYGKYLFEERILSGVGYTLALTVLAMIIGVVLGVILAVMRMSPNRVLSATAWVYLWVFR 113

Query: 138 NIPPLVVIFFLYKSV 152
             P  V +       
Sbjct: 114 GTPVYVQLVLWGLVG 128


>gi|307729487|ref|YP_003906711.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307584022|gb|ADN57420.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 219

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 18/212 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F  + G VL+L         H +T   L  +Y+S  ++ G P LV I + Y    
Sbjct: 26  VLSMFFGLIAGAVLALMG-----VSHSRTLNRLARIYVS--VMRGTPLLVQIFVIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                      G S       +  IALS   AA+++E +R  ++ + +GQ  AA +LGL+
Sbjct: 76  ------GLPSFGISLEPTP--AGVIALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + +
Sbjct: 128 RRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPL 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +Y  L  ++ L       ++AL  + 
Sbjct: 188 YLAAAAVYWVLCQILELLQRWYERRLALPSRH 219



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 31/70 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A   M    I G ++    +S ++ +  + R+YV V R  P LV IF 
Sbjct: 13  VLAQGAVLTVKFAVLSMFFGLIAGAVLALMGVSHSRTLNRLARIYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  + S   
Sbjct: 73  IYYGLPSFGI 82


>gi|228989783|ref|ZP_04149763.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           pseudomycoides DSM 12442]
 gi|228769930|gb|EEM18513.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           pseudomycoides DSM 12442]
          Length = 233

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 20/234 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF--SFVLGIVLSLFATRLSRHFHEKTGKAL 219
             +  F +  NN  L          + I     SF+LG ++++      R          
Sbjct: 14  EHLPDFSILTNNFDLYLEGFKYTVMSSIVALIGSFILGTIMAVMRIAPIRV--------- 64

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L +     +  +  + L+ + +  +F  PV+              F++   AL+ YTAA
Sbjct: 65  -LNWFGAAYVEFIRNIPLVLIAFVFYFAFPVM--------GVTLNGFIAGTAALTIYTAA 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAE +R+G+++VP+GQMEAA + GLT+ +A   ++LPQA++ +IPPL +Q+LNL+KNSS
Sbjct: 116 FIAEAIRAGILSVPKGQMEAARSSGLTYVQAMYYIVLPQAIKIVIPPLGNQFLNLVKNSS 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   +  ADL+  G  I  +T    ++ +     YL L++ +++ +     ++A
Sbjct: 176 ILGIIAGADLMYQGDLISTRTFVTFDVYIFVGMFYLLLTVPLSMLVRYFEKRLA 229



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 40/81 (49%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            + +  ++  ++     L GF  T   +   +I + I+GT++   R++  +++ W    Y
Sbjct: 13  GEHLPDFSILTNNFDLYLEGFKYTVMSSIVALIGSFILGTIMAVMRIAPIRVLNWFGAAY 72

Query: 133 VEVFRNIPPLVVIFFLYKSVL 153
           VE  RNIP +++ F  Y +  
Sbjct: 73  VEFIRNIPLVLIAFVFYFAFP 93


>gi|121634582|ref|YP_974827.1| putative amino acid permease integral membrane protein [Neisseria
           meningitidis FAM18]
 gi|161869734|ref|YP_001598901.1| amino acid permease integral membrane protein [Neisseria
           meningitidis 053442]
 gi|218767907|ref|YP_002342419.1| putative amino acid permease integral membrane protein [Neisseria
           meningitidis Z2491]
 gi|304387901|ref|ZP_07370075.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Neisseria meningitidis ATCC 13091]
 gi|120866288|emb|CAM10029.1| putative amino acid permease integral membrane protein [Neisseria
           meningitidis FAM18]
 gi|121051915|emb|CAM08221.1| putative amino acid permease integral membrane protein [Neisseria
           meningitidis Z2491]
 gi|161595287|gb|ABX72947.1| amino acid permease integral membrane protein [Neisseria
           meningitidis 053442]
 gi|261392845|emb|CAX50426.1| putative amino acid ABC transporter permease protein [Neisseria
           meningitidis 8013]
 gi|304338166|gb|EFM04302.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Neisseria meningitidis ATCC 13091]
 gi|316983780|gb|EFV62761.1| amino ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Neisseria meningitidis H44/76]
 gi|319410154|emb|CBY90490.1| putative amino acid ABC transporter permease protein [Neisseria
           meningitidis WUE 2594]
 gi|325127933|gb|EGC50836.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           N1568]
 gi|325129938|gb|EGC52738.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           OX99.30304]
 gi|325131978|gb|EGC54677.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M6190]
 gi|325137809|gb|EGC60384.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           ES14902]
 gi|325140058|gb|EGC62587.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           CU385]
 gi|325144174|gb|EGC66481.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M01-240013]
 gi|325200526|gb|ADY95981.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           H44/76]
 gi|325203874|gb|ADY99327.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M01-240355]
 gi|325206370|gb|ADZ01823.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M04-240196]
          Length = 238

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  FV   ++ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 37  PLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYIS--VIRGTPLLVQLVIVFY 94

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 95  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 143

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 144 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 203

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 204 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235


>gi|222102584|ref|YP_002539623.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739185|gb|ACM39918.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 219

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 105/216 (48%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G+ L L  T + R F  K   A+   Y+  ++I G P LV + 
Sbjct: 10  WAGLVFTIPLTILSFTFGLTLGLV-TAIGRLFGAKPVAAIARFYV--WVIRGTPLLVQLF 66

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 67  VIFY-----------GLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 115

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 116 AYSIGMSWRQAMLRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 175

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL+L  +++    RL  + A  
Sbjct: 176 TYEPLILYIEAALIYLALCSVLSTVQVRLERRFARY 211



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +  G V T  L          +G +   GRL   K VA I R YV V R  P L
Sbjct: 3   DSLVPLLWAGLVFTIPLTILSFTFGLTLGLVTAIGRLFGAKPVAAIARFYVWVIRGTPLL 62

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S+  + D       G  LN
Sbjct: 63  VQLFVIFYGLPSIGILLDAFPAALIGFTLN 92


>gi|73542272|ref|YP_296792.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72119685|gb|AAZ61948.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 234

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 18/223 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+        F  VLG+V++L         H    K +   Y+S  ++ G P L
Sbjct: 30  LQGTLLTIKFALWSMAFGLVLGMVVALMG-----ISHNPVLKGIARTYVS--IMRGTPLL 82

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y               G         +  + LS    A+++E +R  ++ + RG
Sbjct: 83  VQIFVVYY-----------GLPGIGVALEPTPAGVLTLSLNVGAYLSESMRGAILGIARG 131

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA +LGLT  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     
Sbjct: 132 QWLAAYSLGLTPGQTLRYVVGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQE 191

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  T Q + + L    IY  LS  ++   + L  +++L  + 
Sbjct: 192 VIAATYQPLPLYLAVAAIYWVLSTGLSGLQHVLERRLSLPGRH 234



 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 31/66 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M    ++G +V    +S N ++  I R YV + R  P LV IF 
Sbjct: 28  VLLQGTLLTIKFALWSMAFGLVLGMVVALMGISHNPVLKGIARTYVSIMRGTPLLVQIFV 87

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 88  VYYGLP 93


>gi|326780213|ref|ZP_08239478.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326660546|gb|EGE45392.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 305

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +   V    + + +  ++  P     +    F     L    LT+       V  F 
Sbjct: 43  WRWVAVAVTAVLVAQFINGLVTNPGWEWDVFAQFFSAPVILKAVWLTLQLTFYGTVLGFA 102

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDK 248
           LGIVL+       R       + +   YI  F    +P +V +   + L        F  
Sbjct: 103 LGIVLAFM-----RLSASPFLRTVAYGYIWAF--RSIPLIVQLLFWFNLAYLYKELQFGI 155

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F       +     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   
Sbjct: 156 PFGPGFFTFDTMNLVGAVSAAVLGLALHQAAYAAEIVRGGVLAVGGGQLEAASALGIPKL 215

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      +  ++G+ + +++
Sbjct: 216 RQLRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMAIGELFYQVQVVYGRSGRVVPLLM 275

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+  +++    +    A    +
Sbjct: 276 VATAWYILLTTALSIVQYYVERHYAKGAVR 305



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 45/144 (31%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL     T  L F G +    +G ++   RLSA+  +  +   Y+  FR+IP +V + F
Sbjct: 81  VILKAVWLTLQLTFYGTVLGFALGIVLAFMRLSASPFLRTVAYGYIWAFRSIPLIVQLLF 140

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            +        +       P     +   L            +   ++   IV        
Sbjct: 141 WFNLAYLYKELQFGIPFGPGFFTFDTMNLVGAVSAAVLGLALHQAAYAAEIVRGGVLAVG 200

Query: 208 SRHFHEKTGKALPLLYISTFLIFG 231
                  +   +P L     ++  
Sbjct: 201 GGQLEAASALGIPKLRQLRRIVLP 224


>gi|226314122|ref|YP_002774018.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226097072|dbj|BAH45514.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 229

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 19/234 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +++   +      L    LT+   A   +   V+G+V++ F     R    K    +   
Sbjct: 1   MIIDIFLSSYPLFLKATWLTVQLTAVALILGCVVGLVIAFF-----RISDSKALNYIAHT 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+  +I G P +V I + Y    +   L Q            F +  IAL+ +  A+IA
Sbjct: 56  YIT--VIRGTPLIVQICILYFGLANMVTLSQ------------FWAGAIALAVHNGAYIA 101

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + ++ RGQMEA+ +LG+++  A R ++LPQA R  IP L +Q++  LK+SSL  
Sbjct: 102 EIFRGSIQSIDRGQMEASRSLGMSYPLAMRRIILPQAFRRAIPSLGNQFIIGLKDSSLVA 161

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            VG  DL   G        + +E  ++    YL L ++ + F+N+L A++A  +
Sbjct: 162 YVGMQDLWGTGLGEAASNYKQLETYMVVGLYYLVLIMIFSYFVNKLEARLAKGK 215



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 35/88 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L     T  L    +I   ++G ++   R+S +K + +I   Y+ V R  P +V I  L
Sbjct: 13  FLKATWLTVQLTAVALILGCVVGLVIAFFRISDSKALNYIAHTYITVIRGTPLIVQICIL 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + +++ +             N   +
Sbjct: 73  YFGLANMVTLSQFWAGAIALAVHNGAYI 100


>gi|323357719|ref|YP_004224115.1| amino acid ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323274090|dbj|BAJ74235.1| ABC-type amino acid transport system, permease component
           [Microbacterium testaceum StLB037]
          Length = 344

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 16/273 (5%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            +R     +++F + + V S+     +        F     L     T+   A   V  F
Sbjct: 37  WWRWTLSALLLFVVAQFVWSLFTNDRYMWGTFAQYFFAEPVLIGIGYTLSLTAISAVVGF 96

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--- 251
            LG +L+L      R        ++   YI  F    +P +V I + Y L +  P L   
Sbjct: 97  ALGTLLAL-----GRLSPSPLVSSVAWGYIWFF--RSVPLVVQIIVWYNLGYLYPTLGLG 149

Query: 252 ------GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                           +   F +  + L  + AA+ AEI+R GL++V  GQ EAA ALG+
Sbjct: 150 TPFTTDFWIVEFPTVQLVSAFAAAILGLGLHQAAYSAEIIRGGLVSVDPGQHEAAAALGI 209

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +    ++LPQAMRSI+P  T++ + L+K +S+   +   +L      + N+  + I 
Sbjct: 210 PASRRLFRIILPQAMRSIVPNATNEVIGLVKGASVVFVIAIPELFYAVQVVYNRNSRVIP 269

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++L+ +  Y  ++ ++++    +    A    +
Sbjct: 270 LLLVAVVWYTIITTILSVAQYYIERHYARGSAR 302



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 9/111 (8%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L+G   T  L     +    +GTL+  GRLS + LV+ +   Y+  FR++P +V I   Y
Sbjct: 78  LIGIGYTLSLTAISAVVGFALGTLLALGRLSPSPLVSSVAWGYIWFFRSVPLVVQIIVWY 137

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
                             G+        +              + +LG+ L
Sbjct: 138 NLGYL---------YPTLGLGTPFTTDFWIVEFPTVQLVSAFAAAILGLGL 179


>gi|308186011|ref|YP_003930142.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056521|gb|ADO08693.1| putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 315

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 15/270 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  ++V+      +  V   P+    +    F     L            + V S +L
Sbjct: 31  RWISWILVLVIGSNLLWLVATNPNFEWQVVLKWFTEESVLKGLQ----VTLGLTVVSMIL 86

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G +L L      R    +  + +  LYI  F   G P LV +   Y L    P L     
Sbjct: 87  GTLLGLLLGVW-RLSENRLLRGVAGLYIWFF--RGTPLLVQLIFWYNLSTLFPALSLTLP 143

Query: 254 -----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                      + +     +    L+   AA++AEI+R+GL++V  GQ+E   A G++  
Sbjct: 144 WSSITLASWNTNDLITPLTAAIAGLALNEAAYMAEIIRAGLLSVDNGQVETTQAFGMSRS 203

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A R +++PQAMRSIIPP  +Q ++++K +SL   +   DL+     I N+T + I +++
Sbjct: 204 RALRRIIIPQAMRSIIPPTGNQLISMIKATSLVSVIAMGDLLYSVQAIYNRTFEIIPMLM 263

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +  YL ++ ++ L  + +    A   ++
Sbjct: 264 VAVIWYLLITSILNLGQSAIERYYARGTRR 293



 Score = 44.2 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 32/67 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    MI  T++G L+G  RLS N+L+  +  +Y+  FR  P LV + F Y
Sbjct: 70  LKGLQVTLGLTVVSMILGTLLGLLLGVWRLSENRLLRGVAGLYIWFFRGTPLLVQLIFWY 129

Query: 150 KSVLSVL 156
                  
Sbjct: 130 NLSTLFP 136


>gi|206562321|ref|YP_002233084.1| putative amino acid ABC transporter permease [Burkholderia
           cenocepacia J2315]
 gi|198038361|emb|CAR54318.1| putative amino acid ABC transporter system permease [Burkholderia
           cenocepacia J2315]
          Length = 216

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + SF LG  L L A  L+R    +  + +   Y+S F   G P LV I L Y        
Sbjct: 24  LASFALGSALGL-AVALARVSSIRFLRGIAFAYVSIF--RGTPLLVQILLIY-------- 72

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F             +  +AL+ ++AA+++E  RSG+ AV RGQ EAA +LG+ + K 
Sbjct: 73  ---FGLPRYGITLDPVPAALLALTLFSAAYLSENFRSGINAVDRGQWEAAHSLGMNYWKM 129

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V+LPQ +R  IPP+ S+ + L+K++SLA  +   +L  V   +   T + +E+ L+ 
Sbjct: 130 MWRVILPQGLRIAIPPVGSRMIALIKDTSLASTITVVELTRVADQVGASTFRYMEMFLMV 189

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
             IY  ++ ++ +       +++ +
Sbjct: 190 GLIYWVINQILTIVQTIFEGRVSRR 214



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T +L  +     + +G  V   R+S+ + +  I   YV +FR  P LV I  +Y  +   
Sbjct: 19  TVFLGLASFALGSALGLAVALARVSSIRFLRGIAFAYVSIFRGTPLLVQILLIYFGLPRY 78

Query: 156 LP 157
             
Sbjct: 79  GI 80


>gi|317153463|ref|YP_004121511.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943714|gb|ADU62765.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 295

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 17/262 (6%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
           +           +      +    G   P L  +        S   G++ ++    +   
Sbjct: 34  ATGLNYHWRWDMVWHYLLRYDETAGAWQPGLLTEGLITTLRLSLWAGVLATVVGMAVGLM 93

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ----------------- 253
                     L      LI   P LVLI + Y    D+ +L                   
Sbjct: 94  RTSPRLFNRQLSTTYVGLIRNTPPLVLIFVFYFFIGDQIMLWLGVDDFVRALSDEARSNL 153

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
             F G     P F+S  + L+ +  A+IAEIVR+G+ +V RGQ EAA ALG++  +A R 
Sbjct: 154 AWFFGRMDRFPRFLSAVVTLALFEGAYIAEIVRAGIRSVERGQWEAATALGMSRTRAMRH 213

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQA++ ++P L  Q+++++K+S++   +   +L   G  I+  T +  EI    + +
Sbjct: 214 IIMPQALQRMLPALAGQFISIIKDSAIVSVISIEELTFQGQQIMTTTYRGFEIWTTVLAM 273

Query: 374 YLSLSIMIALFMNRLNAKIALK 395
           Y  L+   +L + +L   ++ +
Sbjct: 274 YFVLTFACSLAVRKLEVALSRQ 295



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 30/61 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L+    + AT++G  VG  R S       +   YV + RN PPLV+IF  Y  
Sbjct: 68  GLITTLRLSLWAGVLATVVGMAVGLMRTSPRLFNRQLSTTYVGLIRNTPPLVLIFVFYFF 127

Query: 152 V 152
           +
Sbjct: 128 I 128


>gi|89902913|ref|YP_525384.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89347650|gb|ABD71853.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 222

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 13/218 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                       +I   + VLG V+ L           +   AL   Y++      L   
Sbjct: 12  WRNLIQGASVTVEITAMALVLGCVMGLLVGIGRLKPERRVIYALCTSYVAVIRGTPLLVQ 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +       FD              + P F+   I L  Y+ A+++EIVR  + ++ RG
Sbjct: 72  LFLLFFGLPQFD-------------ILLPAFVCGVIGLGIYSGAYVSEIVRGSIQSIDRG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G+++  A R ++LPQA+  +IPPL ++++ L+KNS+L   +   D++  G  
Sbjct: 119 QMEAARSVGMSYGTAMRTIILPQALVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQK 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+ T +++E+ L    IY  L+ +  L + R+  ++ 
Sbjct: 179 IISVTYRSLEVYLAIAAIYFVLTGLTTLALRRIEQRLR 216



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEV 135
           + ++   S    ++ G   T  +    ++   ++G LVG GRL    +++  +C  YV V
Sbjct: 3   LDFSPVFSGWRNLIQGASVTVEITAMALVLGCVMGLLVGIGRLKPERRVIYALCTSYVAV 62

Query: 136 FRNI 139
            R  
Sbjct: 63  IRGT 66


>gi|310827296|ref|YP_003959653.1| hypothetical protein ELI_1704 [Eubacterium limosum KIST612]
 gi|308739030|gb|ADO36690.1| hypothetical protein ELI_1704 [Eubacterium limosum KIST612]
          Length = 221

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 111/229 (48%), Gaps = 8/229 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            LN   L           +I V + + G +  +    L R    K    L   YI  F  
Sbjct: 1   MLNQTQLWAIFDGTIVTLEIAVVAIIFGAIFGVVI-ALGRISKNKIFNGLSWFYIWFF-- 57

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +   +  P++   +  G +      +  +I  S  + A++AEI+R+ +
Sbjct: 58  RGTPLLLQLFIIF---YAVPIVY-LDMTGATFEIDPMICAFITFSLNSTAYLAEIIRAAI 113

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++  GQMEAA ALG+++++A   +++PQ  + ++ P+ ++ + LLK++SL   +   DL
Sbjct: 114 ESIDHGQMEAAKALGMSYKQAMGKIIIPQTFKRLVAPVGNELIMLLKDTSLVSTIALFDL 173

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    T+ + TG  +   +    IYL L+ ++ +  ++L  K+   EK+
Sbjct: 174 LRTVKTMASATGSWV-YYIYAAVIYLFLTTILQVVFDKLENKLGAYEKR 221



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 39/89 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + +   AI  G + T  +A   +I   I G ++  GR+S NK+   +   Y+  FR  P 
Sbjct: 3   NQTQLWAIFDGTIVTLEIAVVAIIFGAIFGVVIALGRISKNKIFNGLSWFYIWFFRGTPL 62

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           L+ +F ++ +V  V      +      M 
Sbjct: 63  LLQLFIIFYAVPIVYLDMTGATFEIDPMI 91


>gi|229916228|ref|YP_002884874.1| polar amino acid ABC transporter inner membrane subunit
           [Exiguobacterium sp. AT1b]
 gi|229467657|gb|ACQ69429.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sp. AT1b]
          Length = 219

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 110/226 (48%), Gaps = 13/226 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              + +    +    ++ + S ++GI L +    L +    +    +   Y + F   G 
Sbjct: 7   YDSIPYILEGIPVMFQVVIVSALIGISLGIVVATL-KIVPNRLINFIGHAYTAVF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ +A+   +HF  P L  +       ++  + S  IA S  + A+I+EI+R+G+ AV
Sbjct: 64  PLILQLAI---IHFGLPQLTGY-------ITTPYQSAVIAFSLNSGAYISEIIRAGIQAV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA+ ALG+ + K  R ++LPQA ++I+P L ++ + L K S+L   VG  D++  
Sbjct: 114 DKGQWEASDALGVPYVKQLRSIILPQAFKNILPALVNEMITLTKESALVSTVGVLDIMRR 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +  Q     E +L    IY ++ +++     RL  ++   + +
Sbjct: 174 AQIVGGQKAIYFEPLLFAGVIYFTIVMILTYLGQRLEKRLRKSDGR 219


>gi|303233085|ref|ZP_07319760.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302480860|gb|EFL43945.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 564

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 18/239 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHE 213
             S V         + L     T+  +       F++G+++++F          S +   
Sbjct: 326 FFSQVATIWCTYYKQFLMGTLFTVIISFISTGIGFLIGLLIAIFQSLHVARHHRSTYALY 385

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT   +  +YI  F   G P +V   L +                G  +SP   S ++ +
Sbjct: 386 KTLDIIIKVYIEIF--RGTPMMVQAMLIFYGS---------KLFFGIDLSP-LTSAFLIV 433

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  + A+++E VR G++ V  GQ+E A ALGL H      ++LPQA+ SI+P + ++   
Sbjct: 434 SINSGAYLSETVRGGILGVSAGQLEGAKALGLGHWDTMVHIILPQAIVSILPSVGNELNM 493

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K++S+   +  ++L  V  +I   T Q  +  LI   IY  L+   ++ + ++   +
Sbjct: 494 NIKDTSVLNVIAVSELFFVTKSIAGTTYQTFQTYLITSVIYFILTFAASIMLTQIERHV 552



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 42/133 (31%), Gaps = 11/133 (8%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGA------GRLSAN-----KLVAWICRVY 132
           +Y    L+G + T  ++F       +IG L+         R   +     K +  I +VY
Sbjct: 336 TYYKQFLMGTLFTVIISFISTGIGFLIGLLIAIFQSLHVARHHRSTYALYKTLDIIIKVY 395

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +E+FR  P +V    ++        I    +   F +   N G             +   
Sbjct: 396 IEIFRGTPMMVQAMLIFYGSKLFFGIDLSPLTSAFLIVSINSGAYLSETVRGGILGVSAG 455

Query: 193 SFVLGIVLSLFAT 205
                  L L   
Sbjct: 456 QLEGAKALGLGHW 468


>gi|229086725|ref|ZP_04218892.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-44]
 gi|228696599|gb|EEL49417.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-44]
          Length = 219

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 112/224 (50%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +F F+LG +L+L      +    K       LY S F   G 
Sbjct: 13  PYILKGLEVTLQIVAVSALFGFILGTLLALC-----KIARIKVLNIAADLYTSIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  ++        P F++  +A S  + A+++EI+R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQMIGYDI-------PAFLAAVLAFSLNSGAYMSEIIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  + ++LPQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGVPYGKMMKNIILPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    +Y  L I++      +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLVYYILVIILTFVGKAIEGRMKKSD 219



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  K++     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLQIVAVSALFGFILGTLLALCKIARIKVLNIAADLYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQM 81


>gi|212640130|ref|YP_002316650.1| amino acid ABC transporter permease [Anoxybacillus flavithermus
           WK1]
 gi|212561610|gb|ACJ34665.1| ABC-type amino acid transport system, permease component
           [Anoxybacillus flavithermus WK1]
          Length = 236

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 99/204 (48%), Gaps = 14/204 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +F++G+V++L  T L+R    K  + +   Y+S   I G P LV + + +         
Sbjct: 44  ITFIIGLVIALL-TALARLSSIKALQWIARAYVSA--IRGTPLLVQLFIIFY-------- 92

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     +     +  I  S    A+ +EI+R+ ++++P+GQ EAA +LG+   +  
Sbjct: 93  ---GLPTIGIIIDPLPAAIIGFSLNVGAYASEIIRAAILSIPKGQWEAAYSLGMDDVQTL 149

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA R  +PPL++ +++L+K++SLA  +  +++      I     + + +     
Sbjct: 150 RRIILPQAARVSVPPLSNTFISLVKDTSLASLILVSEMFRKAQEIAATNYEFLLLYTEAA 209

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
            IY  +   +++    + +++   
Sbjct: 210 LIYWIICFFLSIIQGNIESRLNRY 233



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 35/80 (43%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            + T  LA    I   +I  L    RLS+ K + WI R YV   R  P LV +F ++  +
Sbjct: 35  LLYTIPLATITFIIGLVIALLTALARLSSIKALQWIARAYVSAIRGTPLLVQLFIIFYGL 94

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++  I D       G  LN
Sbjct: 95  PTIGIIIDPLPAAIIGFSLN 114


>gi|226310805|ref|YP_002770699.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093753|dbj|BAH42195.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 217

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 18/225 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
               +  L     T+  +    V SFVLG + ++F     R          PL +I+T  
Sbjct: 8   FDHMDMYLKGFWNTLQASLLALVGSFVLGTLFAIFRISPIR----------PLKWIATAY 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I  +  + LI + +      P +          +   F++  + L+ YTAAFIAE +R+G
Sbjct: 58  IEFVRNIPLILVVFLFFVGLPAI--------GIILEPFIAGTLGLTVYTAAFIAETIRAG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P+GQ EAA + GLT+ +  R ++LPQA++ +IPP+ +Q++NL+KNSS+   +   D
Sbjct: 110 IQAIPKGQTEAARSSGLTYGQTMRYIILPQAIKVVIPPMGNQFINLVKNSSVLGVIAGLD 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+  G  I   T    ++ +     YL L++ ++ F++ L  ++A
Sbjct: 170 LMYYGDLISADTFVTFDVYIFVAVFYLILTLPLSAFVSYLERRLA 214



 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 51/113 (45%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ ++    +    L GF NT   +   ++ + ++GTL    R+S  + + WI   Y+E 
Sbjct: 1   MIDFSILFDHMDMYLKGFWNTLQASLLALVGSFVLGTLFAIFRISPIRPLKWIATAYIEF 60

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            RNIP ++V+F  +  + ++  I +  I    G+ +        T+     A 
Sbjct: 61  VRNIPLILVVFLFFVGLPAIGIILEPFIAGTLGLTVYTAAFIAETIRAGIQAI 113


>gi|163938564|ref|YP_001643448.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|229131584|ref|ZP_04260467.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
 gi|163860761|gb|ABY41820.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|228651875|gb|EEL07829.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
          Length = 218

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 69/220 (31%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SFVLGIV+++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVVALIGSFVLGIVMAVMRISPIRI----------LNWIGSAYVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  +AL+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITFNGFVAGTVALTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLVLTIPLSMLVRYLEKRLA 214



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + ++G ++   R+S  +++ WI   YVE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVVALIGSFVLGIVMAVMRISPIRILNWIGSAYVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|229010072|ref|ZP_04167286.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
 gi|228751205|gb|EEM01017.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
          Length = 218

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 69/220 (31%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SFVLGIV+++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVVALIGSFVLGIVMAVMRISPIRI----------LNWIGSAYVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  +AL+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITFNGFVAGTVALTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLVLTIPLSMLVRYLEKRLA 214



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + ++G ++   R+S  +++ WI   YVE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVVALIGSFVLGIVMAVMRISPIRILNWIGSAYVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|237736050|ref|ZP_04566531.1| polar amino acid ABC transporter, inner membrane subunit
           [Fusobacterium mortiferum ATCC 9817]
 gi|229421864|gb|EEO36911.1| polar amino acid ABC transporter, inner membrane subunit
           [Fusobacterium mortiferum ATCC 9817]
          Length = 255

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 96/224 (42%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI-- 229
               L    +T+  +    +   ++G+++ +  T        K G    + ++ +  I  
Sbjct: 14  WPMFLRGAGVTLWISVVGTILGTIIGLIVGVIRTIPVPEKGAKKGVLRVVNWLLSAYIEF 73

Query: 230 -FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y              +          +    +S  T A+++EIVR G
Sbjct: 74  FRGTPMIVQAMVIYYGS----------ALAFEIDIDRIAAALFIVSINTGAYMSEIVRGG 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +I+V +GQ EAA A+G+ H +    V+LPQ +R+I+P   ++++  +K++S+   +  ++
Sbjct: 124 IISVDKGQFEAAQAIGMNHFQTMTNVVLPQVVRNILPATGNEFVINIKDTSVLNVISVSE 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L     T+     +  E   I   +Y  ++  I   +  +  K+
Sbjct: 184 LFFQTKTVAGNNFRYFETFFITCILYFVMTFTITRILRYIEVKL 227



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVEV 135
               L G   T W++  G I  TIIG +VG  R               +V W+   Y+E 
Sbjct: 14  WPMFLRGAGVTLWISVVGTILGTIIGLIVGVIRTIPVPEKGAKKGVLRVVNWLLSAYIEF 73

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 74  FRGTPMIVQAMVIYYGSALAF 94


>gi|228995973|ref|ZP_04155629.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock3-17]
 gi|229003590|ref|ZP_04161406.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock1-4]
 gi|228757632|gb|EEM06861.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock1-4]
 gi|228763746|gb|EEM12637.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock3-17]
          Length = 233

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 20/234 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF--SFVLGIVLSLFATRLSRHFHEKTGKAL 219
             +  F +  NN  L          + I     SF+LG ++++      R          
Sbjct: 14  EHLPDFSILTNNLDLYLEGFKYTVMSSIVALIGSFILGTIMAVMRIAPIRV--------- 64

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L +     +  +  + L+ + +  +F  PV+              F++   AL+ YTAA
Sbjct: 65  -LNWFGAAYVEFIRNIPLVLIAFVFYFAFPVM--------GVTLNGFIAGTAALTIYTAA 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           FIAE +R+G+++VP+GQMEAA + GLT+ +A   ++LPQA++ +IPPL +Q+LNL+KNSS
Sbjct: 116 FIAEAIRAGILSVPKGQMEAARSSGLTYVQAMYYIVLPQAIKIVIPPLGNQFLNLVKNSS 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   +  ADL+  G  I  +T    ++ +     YL L++ +++ +     ++A
Sbjct: 176 ILGIIAGADLMYQGDLISTRTFVTFDVYIFVGMFYLLLTVPLSMLVRYFEKRLA 229



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 40/81 (49%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            + +  ++  ++     L GF  T   +   +I + I+GT++   R++  +++ W    Y
Sbjct: 13  GEHLPDFSILTNNLDLYLEGFKYTVMSSIVALIGSFILGTIMAVMRIAPIRVLNWFGAAY 72

Query: 133 VEVFRNIPPLVVIFFLYKSVL 153
           VE  RNIP +++ F  Y +  
Sbjct: 73  VEFIRNIPLVLIAFVFYFAFP 93


>gi|318076288|ref|ZP_07983620.1| arginine/ornithine transport permease [Streptomyces sp. SA3_actF]
          Length = 286

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 5/258 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
            V   +  + L+ L        + +G   +          +     + V + V+GI   +
Sbjct: 7   WVAALVSLAALAALIYAFSQGKINWGAVPDYFFDDRILSGLGKTMLLTVVAMVIGIAGGV 66

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGS 260
               + R        ++   YI  F   G P LV + + + L   F+   LG       S
Sbjct: 67  VL-AVMRLSKNPVTSSIAWFYIWFF--RGTPVLVQLMVWFNLGLVFEYINLGPLYKDYWS 123

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
           +     ++  + L    AA++AEI R+GL+AV  GQ EAA ALG++H K  R +++PQAM
Sbjct: 124 SFMTPLLTALLGLGLNEAAYMAEICRAGLLAVDEGQTEAAHALGMSHAKTLRRIVIPQAM 183

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R I+PP  ++ +N+LK +SL  AV + +L+     I   +G  +E++ +    YL L+ +
Sbjct: 184 RVIVPPTGNEVINMLKTTSLVAAVQYPELLRAAQDIGQVSGAPVEMLFLAAAWYLILTSV 243

Query: 381 IALFMNRLNAKIALKEKK 398
           +++    +    A    +
Sbjct: 244 LSIGQFYIERYYARGSSR 261



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 2/124 (1%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +   QG + + +   Y     IL G   T  L    M+     G ++   RLS N + + 
Sbjct: 22  YAFSQGKINWGAVPDYFFDDRILSGLGKTMLLTVVAMVIGIAGGVVLAVMRLSKNPVTSS 81

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I   Y+  FR  P LV +   +   L    I    +   +        L+         A
Sbjct: 82  IAWFYIWFFRGTPVLVQLMVWFNLGLVFEYINLGPLYKDYWSSFMTPLLTALLGLGLNEA 141

Query: 188 KIFV 191
               
Sbjct: 142 AYMA 145


>gi|256392977|ref|YP_003114541.1| polar amino acid ABC transporter inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
 gi|256359203|gb|ACU72700.1| polar amino acid ABC transporter, inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
          Length = 349

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 14/230 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+   A +    +++G  ++       R       K+L   ++  +LI  LP L
Sbjct: 93  LHGLELTLWLTAAVLAAGYLIGTGVAAM-----RLSPNPILKSLSFGFV--WLIRSLPLL 145

Query: 236 VLIALKYQ-------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           V +   Y+       L F  P   +F  +  + +     + +IAL+   AAF +E++R G
Sbjct: 146 VQLLFWYEIASLYPRLSFGIPFGPEFAGVKTAHLFNGVFAAFIALTLDVAAFSSELIRGG 205

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AVP GQ+EAA ALGL   +  R ++LPQAM SIIP   +  + +LK +S+   +   D
Sbjct: 206 ILAVPSGQVEAAQALGLGKGRIFRRIVLPQAMPSIIPASGNLLIGMLKATSVISVIAVQD 265

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+     I N+  Q I ++L+    Y++L+ ++++    +    A    +
Sbjct: 266 LLYSTQLIYNENFQVIPLLLVATLWYIALTTVLSIGQYFVERHYARGTDR 315



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T WL  + +    +IGT V A RLS N ++  +   +V + R++P LV + F 
Sbjct: 92  ILHGLELTLWLTAAVLAAGYLIGTGVAAMRLSPNPILKSLSFGFVWLIRSLPLLVQLLFW 151

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           Y+       +       P    +    L            + V +F
Sbjct: 152 YEIASLYPRLSFGIPFGPEFAGVKTAHLFNGVFAAFIALTLDVAAF 197


>gi|296157668|ref|ZP_06840502.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891914|gb|EFG71698.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 219

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 18/212 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +F  + G VL+L         H +    +  +Y+S  ++ G P LV I + Y    
Sbjct: 26  VLSMIFGLIAGAVLALMG-----VSHSRVLNWIARIYVS--VMRGTPLLVQIFVIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IALS   AA+++E +R  ++ + +GQ  AA +LGL+
Sbjct: 76  --------GLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + +
Sbjct: 128 RRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPL 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +Y  L  ++         ++AL  + 
Sbjct: 188 YLAAAAVYWVLCQVLESVQRWYERRLALPSRH 219



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 34/70 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A   MI   I G ++    +S ++++ WI R+YV V R  P LV IF 
Sbjct: 13  VLAQGAVLTVKFAVLSMIFGLIAGAVLALMGVSHSRVLNWIARIYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  + S   
Sbjct: 73  IYYGLPSFGI 82


>gi|315925477|ref|ZP_07921688.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621378|gb|EFV01348.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 221

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 13/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +  + S VL  V+ L    LS     K  +A+  +Y+   +I G P +V     Y  
Sbjct: 24  VTLESTLLSLVLAAVVGLLFGLLS-VSRNKVSRAIARVYVD--IIRGTPIIVQAFFIYFG 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                          +       +  I L+    A++AEI R G+ +V +GQMEAA +LG
Sbjct: 81  VTSA----------LNMRMEPMTAGVITLTLNAGAYLAEIFRGGIQSVDKGQMEAARSLG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L H  A R V+LPQA+R++IP + +Q +  LK+SS+   +G A+L  VG  II    ++ 
Sbjct: 131 LPHGMAMRKVILPQAIRTMIPAIVNQCIITLKDSSILSVIGMAELTQVGKLIIANNLESF 190

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + LI   +Y  + ++++    R+  ++
Sbjct: 191 RMWLIVGIMYFIIIMILSWVSKRIEKRL 218



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 34/67 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T       ++ A ++G L G   +S NK+   I RVYV++ R  P +V  FF+
Sbjct: 18  LLQGLAVTLESTLLSLVLAAVVGLLFGLLSVSRNKVSRAIARVYVDIIRGTPIIVQAFFI 77

Query: 149 YKSVLSV 155
           Y  V S 
Sbjct: 78  YFGVTSA 84


>gi|254804666|ref|YP_003082887.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha14]
 gi|254668208|emb|CBA04964.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha14]
          Length = 227

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  FV   ++ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 26  PLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYIS--VIRGTPLLVQLVIVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 84  -----------GLPSVGIYIAPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 133 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 193 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224


>gi|187923718|ref|YP_001895360.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714912|gb|ACD16136.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 219

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 18/212 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +F  + G VL+L         H +    +  +Y+S  ++ G P LV I + Y    
Sbjct: 26  VLSMIFGLIAGAVLALMG-----VSHNRVLNWIARIYVS--VMRGTPLLVQIFVIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IALS   AA+++E +R  ++ +  GQ  AA +LGL+
Sbjct: 76  --------GLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHNGQWLAAYSLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  R V+ PQA+R  +P +++  ++L+K++SL   +   +L+     II  T Q + +
Sbjct: 128 RRQTLRYVIAPQALRIAVPSMSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPL 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +Y  L  ++         ++AL  + 
Sbjct: 188 YLAAAAVYWVLCQVLESVQRWYERRLALPSRH 219



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 34/70 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A   MI   I G ++    +S N+++ WI R+YV V R  P LV IF 
Sbjct: 13  VLAQGAVLTVKFAVLSMIFGLIAGAVLALMGVSHNRVLNWIARIYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  + S   
Sbjct: 73  IYYGLPSFGI 82


>gi|253574193|ref|ZP_04851535.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251846670|gb|EES74676.1| amino acid ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 222

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + +F LG+++++  T L+R       + L   Y+  ++I G P L+ + + +    
Sbjct: 25  VPLTLITFALGLLVAVL-TALARLSSFGPLRLLARFYV--WIIRGTPLLLQLFIIFY--- 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V   F +  I  +    A+ +EIVR+ ++++  GQ EAA +LG+T
Sbjct: 79  --------GLPSIGIVLDPFPAAVIGFTLSVGAYGSEIVRAAILSIHEGQWEAAYSLGMT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R ++LPQA R  +PPL + +++L+K++SLA  V + ++      I + T + + +
Sbjct: 131 RLQALRRIILPQAARVSVPPLANSFISLVKDTSLAATVTYTEMFRTAQQITSTTYEPLVV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 IYL  S +++   NRL  ++     +
Sbjct: 191 YSEAGLIYLIFSTILSALQNRLEKRLGRFTAR 222



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G   T  L         ++  L    RLS+   +  + R YV + R  P L
Sbjct: 11  DSFFPLLKAGVAFTVPLTLITFALGLLVAVLTALARLSSFGPLRLLARFYVWIIRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           + +F ++  + S+  + D       G  L+
Sbjct: 71  LQLFIIFYGLPSIGIVLDPFPAAVIGFTLS 100


>gi|50122459|ref|YP_051626.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043]
 gi|49612985|emb|CAG76436.1| amino acid ABC transporter [Pectobacterium atrosepticum SCRI1043]
          Length = 254

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 15/239 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FG 231
            +    +T+       +     G+ L L     + H   K      + +     I    G
Sbjct: 16  FMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGIQWPVRIYISAFRG 75

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAA 279
            P  V I + +       +  +   +  S +               F+S  +A++    A
Sbjct: 76  TPLFVQIMVVHFALVPLLINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVAITLNAGA 135

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI R+G+ ++ RGQMEA+ +LG+++ +  R V+LPQA R ++PPL +  + ++K+SS
Sbjct: 136 YVSEIFRAGIQSIDRGQMEASRSLGMSYGRTMRKVILPQAFRRMLPPLGNNAIAIVKDSS 195

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA A+G ADL     T+        E  L    +Y  ++ +++L +  +  +    + +
Sbjct: 196 LASAIGLADLAYAARTVSGAYATYWEPYLAISIVYWVITFLLSLLVRHMEMRFGKSDSR 254



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVY 132
             YA   + G   T       +I  T  G  +G GRL+              + W  R+Y
Sbjct: 10  QEYAPLFMEGTWMTIKCTIICVILGTCWGLTLGLGRLAQAPHGPWKYILHYGIQWPVRIY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +  FR  P  V I  ++ +++ +L  P   +++   +   +   +  +      + +   
Sbjct: 70  ISAFRGTPLFVQIMVVHFALVPLLINPRDGLLVTSNIMSVDFARTLRSDYGAFLSCVVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|19552549|ref|NP_600551.1| ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62390213|ref|YP_225615.1| ABC-type amino acid transport system, permease component
           [Corynebacterium glutamicum ATCC 13032]
 gi|21324099|dbj|BAB98724.1| ABC-type transporter, permease components [Corynebacterium
           glutamicum ATCC 13032]
 gi|41325550|emb|CAF21339.1| ABC-type amino acid transport system, permease component
           [Corynebacterium glutamicum ATCC 13032]
          Length = 316

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            +       L    I        +G       L    +         + + S +LG+VL 
Sbjct: 29  WVAAAIIVALLAWFIISALNNEAYGWDTYRSYLFDTRIATAALHTIALTLLSMILGVVLG 88

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
                + R       + +  LY+  F   G P  V +     L   +    LG       
Sbjct: 89  AIL-AVMRMSGNPVMQGVAWLYLWIF--RGTPIYVQLVFWGLLGSLYQSINLGFAEIDLQ 145

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S +S  F+   I L    AA++AEIVRSG+ AVP GQMEA+ ALG+      R  +LPQA
Sbjct: 146 SLLSNMFLLAVIGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMNWSMTMRRTILPQA 205

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  ++ +++LK +SL VA+ ++ +L      I     + + ++L+    YL ++
Sbjct: 206 MRIIIPPTGNELISMLKTTSLVVAIPYSLELYGRSMDIAYSLFEPVPMLLVAASWYLVIT 265

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +    L         +
Sbjct: 266 SILMVGQYYLEKHFEKGSTR 285



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           ++T  L    MI   ++G ++   R+S N ++  +  +Y+ +FR  P  V + F      
Sbjct: 71  LHTIALTLLSMILGVVLGAILAVMRMSGNPVMQGVAWLYLWIFRGTPIYVQLVFWGLLGS 130

Query: 154 SVLPIPDHSIVLPFGMFLNNRGL 176
               I      +     L+N  L
Sbjct: 131 LYQSINLGFAEIDLQSLLSNMFL 153


>gi|298249929|ref|ZP_06973733.1| polar amino acid ABC transporter, inner membrane subunit
           [Ktedonobacter racemifer DSM 44963]
 gi|297547933|gb|EFH81800.1| polar amino acid ABC transporter, inner membrane subunit
           [Ktedonobacter racemifer DSM 44963]
          Length = 251

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 12/230 (5%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
             +L      +          + V +  LG++L LF   L +       + +   Y+  F
Sbjct: 8   WFYLFQDPNLYFLKAAWLVLWVSVVAQTLGVILGLFL-ALMQMSKWPALQWIARAYLWFF 66

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G P LV + L         +      I    + P+F  + +A S    A+++EI+R+
Sbjct: 67  --RGSPLLVQVLL---------LWTGLPKIVPGLLLPDFACILVAFSLNEGAYMSEIIRA 115

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + AV  GQMEA+ ALG+ +  A R ++LPQA R +IPPL +++ N+LK +S+A  +G  
Sbjct: 116 AIGAVDPGQMEASKALGMRYWVAMRRIILPQAARVVIPPLGNEFNNMLKTTSIATVIGML 175

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L     T    T    E++++    YL L+ +  +    +  ++    K
Sbjct: 176 ELTGTARTFGAPTFNIFELLIVATVYYLILTTIWDVIQRWIERRLDPDRK 225



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L       W++        I+G  +   ++S    + WI R Y+  FR  P LV +  
Sbjct: 18  YFLKAAWLVLWVSVVAQTLGVILGLFLALMQMSKWPALQWIARAYLWFFRGSPLLVQVLL 77

Query: 148 LYKSVLSVLP 157
           L+  +  ++P
Sbjct: 78  LWTGLPKIVP 87


>gi|126724326|ref|ZP_01740169.1| ABC-type glutamine transport system, permease component
           [Rhodobacterales bacterium HTCC2150]
 gi|126705490|gb|EBA04580.1| ABC-type glutamine transport system, permease component
           [Rhodobacterales bacterium HTCC2150]
          Length = 253

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 117/250 (46%), Gaps = 24/250 (9%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLS 208
                  + +   G       +S    T+  +      S +LG++++L         R+ 
Sbjct: 22  TWGWYVINPMTKGGWTNVKFLISGMASTIQISVIAAAISIILGLLVALPGQSSKRGWRIV 81

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  +++PLL +  ++ +GLP +                  F  +G +     F  
Sbjct: 82  SRIYVEFIRSIPLLPMLFWVFYGLPLI------------------FKSMGLNIPIDPFWG 123

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L+   +AF AEI RSG+ ++ +GQ EAA  +GL++ +  R V+LPQA+R I+PP+ 
Sbjct: 124 AIITLAVSDSAFTAEIYRSGIQSISKGQTEAAQTVGLSYAQTMRYVILPQAIRRILPPIA 183

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++ ++K S+ A  +G  +L      ++    + +EI  + +  YL L ++I+  +  L
Sbjct: 184 NQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPLEIYSLLIVEYLILVLIISAGVRWL 243

Query: 389 NAKIALKEKK 398
             ++   E+K
Sbjct: 244 ERRMGSDERK 253



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 36/78 (46%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +    ++ G  +T  ++      + I+G LV     S+ +    + R+YVE  R+IP 
Sbjct: 35  GWTNVKFLISGMASTIQISVIAAAISIILGLLVALPGQSSKRGWRIVSRIYVEFIRSIPL 94

Query: 142 LVVIFFLYKSVLSVLPIP 159
           L ++F+++  +  +    
Sbjct: 95  LPMLFWVFYGLPLIFKSM 112


>gi|218284064|ref|ZP_03489892.1| hypothetical protein EUBIFOR_02495 [Eubacterium biforme DSM 3989]
 gi|218215386|gb|EEC88924.1| hypothetical protein EUBIFOR_02495 [Eubacterium biforme DSM 3989]
          Length = 227

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R    K  +A+  +Y++  +I G P L+ I + + +           F G        +
Sbjct: 45  GRRSKHKVPRAIAFVYVT--IIRGTPLLLQILIIFSVIPSIYT----AFTGNVLRINPIV 98

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              IALS  + A+  E++RSG+  V +GQ EA   LGL++ K  +LV+LPQA + ++PPL
Sbjct: 99  IGMIALSINSGAYQTELLRSGINGVDKGQWEACETLGLSNWKTMKLVILPQAFKRVVPPL 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            S+++ L+K+SSL   +G  +L+     I  +    +   ++    YL ++ +++   N+
Sbjct: 159 ISEFITLIKDSSLISCIGAVELLKGAQVIGAEYYDVMSPYMLAAIFYLIMTCIVSCIGNK 218

Query: 388 LNAKIALKE 396
           +  ++A+ +
Sbjct: 219 VEKRLAVSD 227



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + +  +A   ++   ++G L  +GR S +K+   I  VYV + R  P L+ I  
Sbjct: 16  YLAKGALLSVAIAALSLLIGLVLGILGASGRRSKHKVPRAIAFVYVTIIRGTPLLLQILI 75

Query: 148 LYKSVLSVL 156
           ++  + S+ 
Sbjct: 76  IFSVIPSIY 84


>gi|310778139|ref|YP_003966472.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309747462|gb|ADO82124.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 236

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 119/240 (49%), Gaps = 23/240 (9%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEK---------TG 216
           G+F+      +    +  +  + + + ++G+ +   L   RLS  +  K           
Sbjct: 9   GIFIEGNRYMYIVNGLSFSVGVTLLAALIGLTVGVLLAVMRLSHFYPFKNTEKYKKTNPL 68

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             + L YI   +I G P +V +           VL    F+G    +P F+   +A    
Sbjct: 69  NLIALWYID--IIRGTPAVVQLM----------VLANVVFVGNLRNTPIFVVAALAFGLN 116

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A++AEI+R+G+  + +GQ EA+ ALG+ +    + +++PQA+++I+P L S+++ LLK
Sbjct: 117 SSAYVAEIIRAGIEGLDKGQTEASRALGMNYFLTMKEIIIPQAIKNILPALVSEFITLLK 176

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+   +G  DL+     I +QT + IE +L    IYL ++ +   FM ++   + + +
Sbjct: 177 ETSIVGFIGGVDLLRSANIITSQTYRGIEPLLAVGLIYLIMTSIFTKFMRKVEKGLKVSD 236


>gi|170698798|ref|ZP_02889861.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170136276|gb|EDT04541.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 297

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 106/205 (51%), Gaps = 5/205 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V +  LG+VL +  T + R        A+   YI  F   G P ++ + L + L  
Sbjct: 82  IVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAQGYIWLF--RGTPVILQLLLWFNLAL 138

Query: 247 DKPVLGQFNFIGGSTV--SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P LG        TV     F++  + L     A+ +E+VR+GL++V  GQ EAA ++G
Sbjct: 139 VFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIG 198

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V +A+++     I     + I
Sbjct: 199 MARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVI 258

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
           E++++    YL +  +++L   R+ 
Sbjct: 259 ELLIVAGIWYLVVVTVLSLAQARVE 283



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A +IL G  NT  +    M    ++G +    RLS+N ++  I + Y+ +FR  P ++ +
Sbjct: 71  ARSILTGLGNTIVMTVLAMTLGVVLGVVTAVMRLSSNPVLGAIAQGYIWLFRGTPVILQL 130

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 131 LLWFNLAL 138


>gi|172065440|ref|YP_001816152.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171997682|gb|ACB68599.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 297

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 5/205 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V +  LG+VL +  T + R        A+   YI  F   G P ++ + L + L  
Sbjct: 82  IVMTVLAMTLGVVLGVV-TAVMRLSSNPVLGAIAQGYIWLF--RGTPVILQLLLWFNLAL 138

Query: 247 DKPVLGQFNFIGGSTV--SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P LG        TV     F++  + L     A+ +E+VR+GL++V  GQ EAA ++G
Sbjct: 139 VFPTLGIPGIAEYRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIG 198

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V +A+++     I     + I
Sbjct: 199 MARLQALRRIILPQAMRVIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVI 258

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
           E++++    YL++  +++L   R+ 
Sbjct: 259 ELLIVAGIWYLAVVTVLSLAQARVE 283



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A +IL G  NT  +    M    ++G +    RLS+N ++  I + Y+ +FR  P ++ +
Sbjct: 71  ARSILTGLGNTIVMTVLAMTLGVVLGVVTAVMRLSSNPVLGAIAQGYIWLFRGTPVILQL 130

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 131 LLWFNLAL 138


>gi|315178664|gb|ADT85578.1| ABC-type amino acid transport system permease component [Vibrio
           furnissii NCTC 11218]
          Length = 245

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 17/260 (6%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           + R     +    L                   G+      ++    T+  +    V + 
Sbjct: 1   MIRQYSVGLCTLLLTGCSQYQWGWYVLDPFTAQGVRNLTFLIAGFGDTLSLSLLSMVLAM 60

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            LG++++L A         +T +    +Y+   ++  +P LVL+     +++  PVL   
Sbjct: 61  GLGLMVALPA-----LSPRRTLRQANRVYVE--VVRAIPLLVLLL---WIYYGLPVLFDL 110

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +          F +  +ALS   +AF+AE+ R G+ A+ RGQ EAA ALGL   +  RLV
Sbjct: 111 SL-------NHFTAGVMALSLAESAFMAEVFRGGIQAIDRGQHEAAQALGLRDWQKMRLV 163

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R I+PPL +Q++ +LK SSL   +G +DL      ++      +EI    +  Y
Sbjct: 164 ILPQALRHILPPLGNQFIYILKMSSLVSVIGLSDLTRRANELVVTEYLPLEIYTFLVLEY 223

Query: 375 LSLSIMIALFMNRLNAKIAL 394
           L L ++++  + RL  K+AL
Sbjct: 224 LILILLVSYGVRRLEKKLAL 243



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 37/68 (54%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T ++ GF +T  L+   M+ A  +G +V    LS  + +    RVYVEV R IP LV++
Sbjct: 38  LTFLIAGFGDTLSLSLLSMVLAMGLGLMVALPALSPRRTLRQANRVYVEVVRAIPLLVLL 97

Query: 146 FFLYKSVL 153
            ++Y  + 
Sbjct: 98  LWIYYGLP 105


>gi|154484326|ref|ZP_02026774.1| hypothetical protein EUBVEN_02039 [Eubacterium ventriosum ATCC
           27560]
 gi|149734803|gb|EDM50720.1| hypothetical protein EUBVEN_02039 [Eubacterium ventriosum ATCC
           27560]
          Length = 346

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 111/219 (50%), Gaps = 14/219 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG++L +F   L +    +    +   Y+  F   G P L+ + + Y  
Sbjct: 135 LTISLTTFTVILGVILGVFL-ALGKISKNRVINKIASAYVFFF--RGTPLLIQLFVVY-- 189

Query: 245 HFDKPVLGQFNFIG-------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            F  P L  F +                F++  IA +  + A+ AEIVR+ + ++ +GQ 
Sbjct: 190 -FTVPGLFGFAWRDFFSAADADGVYKGAFIAALIAFALNSGAYCAEIVRAAIQSIDKGQY 248

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALG+ + +   L+++PQ++R ++P + ++++ +LK++SL  A+   D+ ++  +I+
Sbjct: 249 EAAKALGMNYSQTMSLIVIPQSIRRMLPAICNEFIMVLKDASLVFAISLMDITTISNSIM 308

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           N  G  I + +  + IYL ++       N++  K ++ E
Sbjct: 309 NSDGSYI-VFIPALIIYLIITAFFTYIFNKIEKKFSVYE 346



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 34/75 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L    +I   I+G  +  G++S N+++  I   YV  FR  P L+ +F +
Sbjct: 129 MLHGAKLTISLTTFTVILGVILGVFLALGKISKNRVINKIASAYVFFFRGTPLLIQLFVV 188

Query: 149 YKSVLSVLPIPDHSI 163
           Y +V  +        
Sbjct: 189 YFTVPGLFGFAWRDF 203


>gi|56413133|ref|YP_150208.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362059|ref|YP_002141696.1| ABC transporter membrane protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56127390|gb|AAV76896.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197093536|emb|CAR58998.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
          Length = 222

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + L   YIS F   G P +  + + Y        L QF             +
Sbjct: 44  RMSPLWLVRWLARFYISIF--RGTPLIAQLFMIYY------GLPQFG-----IELDPIPA 90

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I LS  TAA+ +E +R+ + A+ +GQ EAA ++G+T  +  R  +LPQA R  +PPL+
Sbjct: 91  AMIGLSLNTAAYTSETLRAAISAIDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLS 150

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   N  
Sbjct: 151 NSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYF 210

Query: 389 NAKIALKEKK 398
             ++  +E++
Sbjct: 211 ENQLNRQERE 220



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S   LV W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFLGLLLGFVLALMRMSPLWLVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|297243838|ref|ZP_06927768.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
 gi|296888259|gb|EFH27001.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
          Length = 337

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  ++V       + S++  P     +     +++  LS    T+       V S V  +
Sbjct: 35  IAGVIVAVIACSLLYSIITNPRFEWQVVGIYLISDNVLSGIGWTLLLTLIAMVISIVFAV 94

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
            L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 95  GLAMM-----RKSVNPVLRGVSWFFIWFFRGTPVYTQLVFWGMFAVLVPRIGIGIPFTSV 149

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + +     +  + LS   +A+++EIVR+GL AV  GQ+EAA ALG+      R
Sbjct: 150 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 209

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            ++LPQAMR I+PPL ++ + +LK +SL +AV F  +L      I N+  + I ++L+  
Sbjct: 210 RIILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 269

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
             YL ++ ++ +    L    A
Sbjct: 270 IWYLIITSILMVLQYMLEKHFA 291



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+ + +    +   R S N ++  +   ++  FR  P    + F  
Sbjct: 72  LSGIGWTLLLTLIAMVISIVFAVGLAMMRKSVNPVLRGVSWFFIWFFRGTPVYTQLVFWG 131

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
              + V  I           F +    S  +  + T+    V    L
Sbjct: 132 MFAVLVPRIGIGIP------FTSVEFWSIDSNVIMTSLTAAVVGLSL 172


>gi|228989959|ref|ZP_04149935.1| Amino acid ABC transporter [Bacillus pseudomycoides DSM 12442]
 gi|228769783|gb|EEM18370.1| Amino acid ABC transporter [Bacillus pseudomycoides DSM 12442]
          Length = 226

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    +      + T   + + +F +G++L+   T L+R    +  + +  +Y+S  +I
Sbjct: 12  IMQASFMPMLEGALFTTIPLTLITFAIGLILATL-TALARISGSRLLQWIARIYVS--II 68

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +   +  P L              + +  I  S    A+ +EI+R+ +
Sbjct: 69  RGTPLLVQLFIIF---YGLPTLK--------IEIDPYTAAIIGFSLNVGAYASEIIRASI 117

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+GQ EAA  +G+T+ +A + ++LPQA R  IPPL++ +++L+K++SLA  +   +L
Sbjct: 118 LSIPKGQWEAAYTIGMTYPQALKRIILPQATRVSIPPLSNTFISLVKDTSLASLILVTEL 177

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I     + + +      IY ++  ++++    L  +
Sbjct: 178 FRKAQEIAAMNYEFLIVYFEAGLIYWAICFLLSIVQQILEKR 219



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 35/80 (43%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L         I+ TL    R+S ++L+ WI R+YV + R  P LV +F ++  +
Sbjct: 25  LFTTIPLTLITFAIGLILATLTALARISGSRLLQWIARIYVSIIRGTPLLVQLFIIFYGL 84

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
            ++    D       G  LN
Sbjct: 85  PTLKIEIDPYTAAIIGFSLN 104


>gi|119510484|ref|ZP_01629617.1| permease protein of amino acid ABC transporter [Nodularia spumigena
           CCY9414]
 gi|119464906|gb|EAW45810.1| permease protein of amino acid ABC transporter [Nodularia spumigena
           CCY9414]
          Length = 306

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 7/232 (3%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S+     D R  NI  Q+I   L  V+ +    N+  N+++  + LG  FL ++A F I 
Sbjct: 4   SKPPVWRDYRFWNIVAQLIAVSLAAVVVIILWGNLNRNLQQLGIQLGFDFLQQQASFGIG 63

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++ Y    +Y+ A+ VG VN+  +A  G+   TI+G   G  RLS N LV  I  +YV
Sbjct: 64  ETLINYQPTDTYSRALWVGLVNSLRVAVLGIFFTTIVGISAGIARLSDNWLVRKITTIYV 123

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF- 192
           E+FRN P L+ + F Y +V    P  +  I L   + ++  G+  P  ++       +  
Sbjct: 124 EIFRNTPLLLQLLFWYFAVFLGFPRREDKISLWGFLGISQDGIELPWFSLSPEFSALLLG 183

Query: 193 ------SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
                 +F+  IV     +     +        P L I   +IF     V+I
Sbjct: 184 LVFFTGAFIAEIVRGGIQSVPKGQWEAARSLGFPPLLIMRLVIFPQALRVII 235



 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 87/238 (36%), Positives = 127/238 (53%), Gaps = 19/238 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYI 224
            +         ++        F+ ++GI   +      +  R     + +  +  PLL  
Sbjct: 75  YSRALWVGLVNSLRVAVLGIFFTTIVGISAGIARLSDNWLVRKITTIYVEIFRNTPLLLQ 134

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI-------GGSTVSPEFMSLYIALSCYT 277
             F  F       + L +    DK  L  F  I          ++SPEF +L + L  +T
Sbjct: 135 LLFWYFA------VFLGFPRREDKISLWGFLGISQDGIELPWFSLSPEFSALLLGLVFFT 188

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AFIAEIVR G+ +VP+GQ EAA +LG       RLV+ PQA+R IIPPLTSQYLNL KN
Sbjct: 189 GAFIAEIVRGGIQSVPKGQWEAARSLGFPPLLIMRLVIFPQALRVIIPPLTSQYLNLTKN 248

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           SSLA+A+G+ D+  V  T  NQTG+A+E++L+ +  YL+LS+ I+L MN  N ++ +K
Sbjct: 249 SSLAIAIGYPDIYFVASTTFNQTGRAVEVMLLLILTYLTLSLTISLTMNLFNRQVQIK 306


>gi|254440026|ref|ZP_05053520.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198255472|gb|EDY79786.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 265

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 14/259 (5%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
            F  +  ++  +       VL   ++          + +     +  F+    I L L  
Sbjct: 9   DFPYWLLIVLAVGGYFFWRVLTDDLYTQVLQTLSKGIWITVFVTLVGFTLAASIGLGLAL 68

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             +SR       + +  LY    ++ G+P +VL+ L         ++  FN+I G     
Sbjct: 69  MSMSRFI---ALRQIARLYTE--IVRGVPIIVLL-LYVAFVLAPGMVALFNWITGILGFD 122

Query: 265 E--------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                         IAL+   +AFIAE+ R+GL ++ +GQ+EAA ALGL+  +  R ++ 
Sbjct: 123 PIRNRDFSLLWRAIIALTIGYSAFIAEVFRAGLQSIEKGQIEAAEALGLSPWRRFRHIVF 182

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA R I+PPL + ++ ++K+SSL   +G  D+   G        +  E   +   IYL+
Sbjct: 183 PQAFRRILPPLGNDFIAMVKDSSLVSVLGVLDVTQAGKITAAGNFRYFETYNVVALIYLT 242

Query: 377 LSIMIALFMNRLNAKIALK 395
           ++I ++L + RL  ++  K
Sbjct: 243 MTIGLSLALRRLERQLREK 261



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 39/116 (33%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T ++   G   A  IG  +    +S    +  I R+Y E+ R +P +V++
Sbjct: 38  LQTLSKGIWITVFVTLVGFTLAASIGLGLALMSMSRFIALRQIARLYTEIVRGVPIIVLL 97

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            ++   +   +    + I    G                    I   +F+  +  +
Sbjct: 98  LYVAFVLAPGMVALFNWITGILGFDPIRNRDFSLLWRAIIALTIGYSAFIAEVFRA 153


>gi|298252593|ref|ZP_06976387.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
 gi|297532957|gb|EFH71841.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
          Length = 337

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  ++V       + S++  P     +     +++  LS    T+       V S V  +
Sbjct: 35  IAGVIVAVIACSLLYSIITNPRFEWQVVGIYLISDNVLSGIGWTLLLTLIAMVISIVFAV 94

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
            L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 95  GLAMM-----RKSVNPVLRGVSWFFIWFFRGTPVYTQLVFWGMFAVLVPRISIGIPFTSV 149

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + +     +  + LS   +A+++EIVR+GL AV  GQ+EAA ALG+      R
Sbjct: 150 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 209

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR I+PPL ++ + +LK +SL +AV F  +L      I N+  + I ++L+  
Sbjct: 210 RVILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 269

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
             YL ++ ++ +    L    A
Sbjct: 270 IWYLIITSILMVLQYMLEKHFA 291



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+ + +    +   R S N ++  +   ++  FR  P    + F  
Sbjct: 72  LSGIGWTLLLTLIAMVISIVFAVGLAMMRKSVNPVLRGVSWFFIWFFRGTPVYTQLVFWG 131

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
              + V  I           F +    S  +  + T+    V    L
Sbjct: 132 MFAVLVPRISIGIP------FTSVEFWSIDSNVIMTSLTAAVVGLSL 172


>gi|261250662|ref|ZP_05943237.1| putative amino acid ABC transporter permease protein [Vibrio
           orientalis CIP 102891]
 gi|260939231|gb|EEX95218.1| putative amino acid ABC transporter permease protein [Vibrio
           orientalis CIP 102891]
          Length = 246

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 111/235 (47%), Gaps = 13/235 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               VL          L F          + + S +  + + L    L      K  KA 
Sbjct: 22  WGWYVLDPTTAQGQTNLQFLIAGFYDTISVSLLSMLFAMTIGLVV-ALPSLSDSKLLKAF 80

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +Y+   +I  +P LVL+     +++  P L   +          F +  IAL+   +A
Sbjct: 81  NRVYVE--VIRSIPVLVLLL---WVYYGMPTLMDISL-------DHFWAGVIALTIAESA 128

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+AE+ R G+ A+ +GQ EAA +LGL + +  RLV+LPQA+R I+PPL +Q++ +LK SS
Sbjct: 129 FMAEVFRGGIQAIAKGQHEAASSLGLNYWQRMRLVILPQALRQILPPLGNQFIYILKMSS 188

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L   +G +DL      ++      +EI    +  YL L ++++  +  L  +IA+
Sbjct: 189 LVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLVSQAVRWLERRIAI 243



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/76 (31%), Positives = 43/76 (56%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +    ++ GF +T  ++   M+ A  IG +V    LS +KL+    RVYVEV R+IP
Sbjct: 33  QGQTNLQFLIAGFYDTISVSLLSMLFAMTIGLVVALPSLSDSKLLKAFNRVYVEVIRSIP 92

Query: 141 PLVVIFFLYKSVLSVL 156
            LV++ ++Y  + +++
Sbjct: 93  VLVLLLWVYYGMPTLM 108


>gi|15807268|ref|NP_295998.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6460085|gb|AAF11824.1|AE002060_3 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 239

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +    V S V+G  L L      R +       +  +Y+   ++ G+P +VL+++ Y  
Sbjct: 38  VSLCALVVSVVVGTALGLV-----RVYRVPLLGPIGNIYVE--VVRGIPLIVLLSVIY-- 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L              F +  +AL  Y+AA+ +EIVR GL +VP GQ+EAA +LG
Sbjct: 89  -FGLPTL--------GLTLAGFPAAVLALGLYSAAYTSEIVRGGLGSVPAGQIEAARSLG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +A R V+LPQA R  +P L +++++L+  SSLA AV   +L S G  I N T +  
Sbjct: 140 LSRGQALRFVVLPQAWRVALPALGNEFVSLILGSSLASAVTLQELFSQGRYITNATYRQF 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E+  +   IY  L+  +   +  L  +++  +
Sbjct: 200 EVYAVLAVIYFVLTFTLTRAVRALEHRLSRGQ 231



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   +L G   T  ++   ++ + ++GT +G  R+    L+  I  +YVEV R IP 
Sbjct: 21  SGDYPQLLLSGLGVTLAVSLCALVVSVVVGTALGLVRVYRVPLLGPIGNIYVEVVRGIPL 80

Query: 142 LVVIFFLYKSVL 153
           +V++  +Y  + 
Sbjct: 81  IVLLSVIYFGLP 92


>gi|188590807|ref|YP_001795407.1| high-affinity glutamine transporter, ABC transporter [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937701|emb|CAP62685.1| high-affinity glutamine transport protein, ABC transporter,
           membrane component [Cupriavidus taiwanensis LMG 19424]
          Length = 222

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                       ++   + VLG V+ L           +    +   Y++      L   
Sbjct: 12  WPDILHGAVITVQVTACALVLGCVMGLLVGIGRLDPKRRVIYGICTAYVTFIRGTPLLV- 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                       +  L  F     + + P F+   I L  Y+ A+++EIVR  + +V +G
Sbjct: 71  ------------QLFLLFFGLPQFNILLPAFVCGVIGLGIYSGAYVSEIVRGAIQSVDKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G++  +A R ++LPQA+  +IPPL ++++ L+KNS+L   +  ADL+  G  
Sbjct: 119 QMEAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQK 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           II+ + +++E+ L    +YL L+    L + R   ++ + 
Sbjct: 179 IISVSYRSLEVYLAIALVYLILTSAAGLILRRAEQRLRMG 218



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEV 135
           + ++   +    IL G V T  +    ++   ++G LVG GRL    +++  IC  YV  
Sbjct: 3   LDFSPVFAGWPDILHGAVITVQVTACALVLGCVMGLLVGIGRLDPKRRVIYGICTAYVTF 62

Query: 136 FRNI 139
            R  
Sbjct: 63  IRGT 66


>gi|46202161|ref|ZP_00208410.1| COG0834: ABC-type amino acid transport/signal transduction systems,
           periplasmic component/domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 542

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 113/223 (50%), Gaps = 3/223 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS+    +     I + ++ L +VL + A  L R   ++    L   Y+  F    
Sbjct: 315 TETYLSWLLWALVWTLAISLSAWALALVLGVVAGAL-RTVPDRRVAGLATAYVELF--RN 371

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV + L + +  +        ++     + EF+  ++ L  +T++ +AE VR+G+ +
Sbjct: 372 IPLLVQMFLWFFVVPELLPSSWALWVKQEMPAKEFVIAFLCLGLFTSSRVAEQVRAGIES 431

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            PRGQ  AA+ALGLT  +  R V LP A+R +IPPLTS+++N+ KNSS+A A+G A+L  
Sbjct: 432 RPRGQRMAALALGLTETQVFRHVTLPVALRVVIPPLTSEFMNVFKNSSVAFAIGMAELTF 491

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           V   +  ++ Q IE +     +Y   + +    M  +  +  +
Sbjct: 492 VARQMQEESEQGIETLAAVTLLYFLCAFLANRGMALMERRTRI 534



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 1/95 (1%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    VP +   +Y + +L   V T  ++ S    A ++G + GA R   ++ VA + 
Sbjct: 304 WGIYFEPVP-SGTETYLSWLLWALVWTLAISLSAWALALVLGVVAGALRTVPDRRVAGLA 362

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
             YVE+FRNIP LV +F  +  V  +LP      V
Sbjct: 363 TAYVELFRNIPLLVQMFLWFFVVPELLPSSWALWV 397


>gi|322384242|ref|ZP_08057951.1| amino acid ABC transporter permease-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321150890|gb|EFX44316.1| amino acid ABC transporter permease-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 175

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 13/186 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K  K +   YI    + G P LV + + Y           F         P  +S
Sbjct: 2   RISKIKIVKGIAAAYIEF--LRGTPLLVQLYIIY-----------FALPQFGISLPGMVS 48

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL+  +AA++AEI R+G+ ++ +GQMEAA +LG+TH  A +L+++PQA+R+I+P L 
Sbjct: 49  GIAALTLNSAAYVAEIFRAGIESIDKGQMEAARSLGMTHNMAMKLIIIPQAIRNILPALG 108

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ ++K SS+   VG  DL+    T+   T +A E +++   +Y  ++  ++  + + 
Sbjct: 109 NEFIVIIKESSIVSIVGITDLMFNADTVRGVTYKAFEPLIVAAVVYFIMTFTLSKLLGKF 168

Query: 389 NAKIAL 394
             +I  
Sbjct: 169 ERRIKR 174


>gi|258406275|ref|YP_003199017.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798502|gb|ACV69439.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 234

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 18/247 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           L    I   ++         +  L    +++         +F +G+V  L      R   
Sbjct: 3   LENWQIVWENMDYFLIGPYPDGPLGGLAMSILLALGGIFGAFWVGLVFGLM-----RLSK 57

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           +   +   L+YI   +I G P L++I   Y L            I      PE  S  IA
Sbjct: 58  KAIFRLPALVYIE--IIRGTPLLMVIFWFYFLA----------PIAFGKPLPEAASALIA 105

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
              +T+A++AEIVR+G+ ++P+GQMEAA   GL+H ++ + ++LPQA+R++IP   +Q++
Sbjct: 106 FIVFTSAYVAEIVRAGVQSLPKGQMEAARGSGLSHVQSMQYIILPQALRNMIPSFVNQFV 165

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L K++SLA  +G  +L      + N+T     EI +    IY  +  ++     +L  +
Sbjct: 166 SLTKDTSLAYIIGVNELTRTATQVNNRTLIAPTEIFITIALIYFVVCYVLTALSRKLERQ 225

Query: 392 IALKEKK 398
           ++  + +
Sbjct: 226 MSRYQAR 232



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           ++I    + Y     Y    L G   +  LA  G+  A  +G + G  RLS   +     
Sbjct: 6   WQIVWENMDYFLIGPYPDGPLGGLAMSILLALGGIFGAFWVGLVFGLMRLSKKAIFRLPA 65

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
            VY+E+ R  P L+VIF+ Y         P
Sbjct: 66  LVYIEIIRGTPLLMVIFWFYFLAPIAFGKP 95


>gi|126737593|ref|ZP_01753323.1| putative amino acid ABC transporter, permease protein [Roseobacter
           sp. SK209-2-6]
 gi|126720986|gb|EBA17690.1| putative amino acid ABC transporter, permease protein [Roseobacter
           sp. SK209-2-6]
          Length = 253

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 117/244 (47%), Gaps = 12/244 (4%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           S       + +   G       +S    T+  +    V S VLG++++L     SR +  
Sbjct: 21  STWGWYVINPMTASGWVNVKFLISGMGDTILISVIAAVISIVLGLIVALPGLAKSRWWRM 80

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
                     ++   +  + ++ L+ + + + +  P++  F  +G +     F    I L
Sbjct: 81  ----------VNRVYVELVRSIPLLPMLFWVFYGLPII--FREMGMNVPIDPFWGAIITL 128

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +   +AF AEI R+G+ ++ +GQ EAA  +GL + +  R V+LPQA+R I+PPL +Q++ 
Sbjct: 129 ALSDSAFTAEIYRAGIQSIAKGQTEAAQTIGLNYLQTMRYVILPQAIRRILPPLANQFIY 188

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++K S+ A  +G  +L      ++    + +EI  + +  YL L ++I+  +  L  ++ 
Sbjct: 189 IVKMSAFASVIGMQELTRRANELVVTEYRPLEIYSLLILEYLILVLIISAGVRWLERRMG 248

Query: 394 LKEK 397
             E+
Sbjct: 249 SDER 252



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 42/86 (48%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S       ++ G  +T  ++    + + ++G +V    L+ ++    + RVYVE+ R+IP
Sbjct: 34  SGWVNVKFLISGMGDTILISVIAAVISIVLGLIVALPGLAKSRWWRMVNRVYVELVRSIP 93

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            L ++F+++  +  +      ++ + 
Sbjct: 94  LLPMLFWVFYGLPIIFREMGMNVPID 119


>gi|139439311|ref|ZP_01772753.1| Hypothetical protein COLAER_01769 [Collinsella aerofaciens ATCC
           25986]
 gi|133775335|gb|EBA39155.1| Hypothetical protein COLAER_01769 [Collinsella aerofaciens ATCC
           25986]
          Length = 382

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 93/184 (50%), Gaps = 2/184 (1%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F +  G+    +Y  + ++ G P +V   L Y   F       F     + +   F + 
Sbjct: 190 RFFKSIGRGFATIY--STIVRGTPMMVQGLLIYYAGFTVLRGMGFETAQANQIWSTFTAG 247

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + +S  + A++ E++R G+ ++  GQ EAA +LGL+  +A R V+ PQ +++ IP LT+
Sbjct: 248 LVTISLNSTAYMMEVLRGGIESIDAGQAEAARSLGLSQWQAMRKVVFPQGIKNAIPALTN 307

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +  +K+SS+   +G  DL+    T+     + +E+  + + +YL L+++ +  +    
Sbjct: 308 ELIINIKDSSVLSVIGVFDLMYATTTVAGVYYRQMEVYCVALVVYLILTLVASRLLEAFG 367

Query: 390 AKIA 393
            K+ 
Sbjct: 368 KKLG 371


>gi|323697767|ref|ZP_08109679.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457699|gb|EGB13564.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 271

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 19/240 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
                IP +   +    F     +    +T        V   V+G+  +L      R   
Sbjct: 46  WQWYRIPQYLWTVTDQGFTWGPLMEGLGVTFRITGVSMVLMLVIGLTTALM-----RMSA 100

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + +   Y+   LI   P L+ I   Y +            +        F S  IA
Sbjct: 101 SWAARGVARAYME--LIRNTPLLIQIFFIYFV------------VAPILDISAFRSAVIA 146

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS +  A+ +EI R+G+ ++ +GQ EAA +LG+      R ++LPQA+R ++PPLTSQ +
Sbjct: 147 LSLFEGAYASEIFRAGITSIDKGQWEAAKSLGMGPYAMYRHIILPQAVRRVLPPLTSQAV 206

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L+K+S+L   +   DL   G  I  +T    EI      IYL++++ ++  +  L  + 
Sbjct: 207 SLVKDSALVSTIAILDLTQRGRMIDAETFLTFEIWFTVAAIYLAVTLALSGVVRLLERRF 266



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 38/83 (45%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I Q +   T        ++ G   TF +    M+   +IG      R+SA+     + 
Sbjct: 49  YRIPQYLWTVTDQGFTWGPLMEGLGVTFRITGVSMVLMLVIGLTTALMRMSASWAARGVA 108

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
           R Y+E+ RN P L+ IFF+Y  V
Sbjct: 109 RAYMELIRNTPLLIQIFFIYFVV 131


>gi|229083878|ref|ZP_04216187.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-44]
 gi|228699456|gb|EEL52132.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-44]
          Length = 233

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 117/220 (53%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LGI++++      R           + +  T  +  + 
Sbjct: 28  MYLEGFKYTVMSSIVALIGSFILGIIMAVMRIAPIRF----------MNWFGTAYVEFIR 77

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++   AL+ YTAAFIAE +R+G+++VP
Sbjct: 78  NIPLVLIAFVFYFAFPVI--------GVTLNGFVAGTSALTVYTAAFIAEAIRAGIMSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 130 KGQMEAARSSGLTYVQAMYYVVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L++ +++ +     ++A
Sbjct: 190 DLISTRTLVTFDVYIFVGLFYLLLTVPLSMLVRYFEKRLA 229



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 37/81 (45%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            + +   +  ++     L GF  T   +   +I + I+G ++   R++  + + W    Y
Sbjct: 13  GKHLPDVSILTNNIDMYLEGFKYTVMSSIVALIGSFILGIIMAVMRIAPIRFMNWFGTAY 72

Query: 133 VEVFRNIPPLVVIFFLYKSVL 153
           VE  RNIP +++ F  Y +  
Sbjct: 73  VEFIRNIPLVLIAFVFYFAFP 93


>gi|134293670|ref|YP_001117406.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134136827|gb|ABO57941.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 594

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 1/244 (0%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
            S+L  P     +    FL+   LS    T+       VF F LG +++L     SR   
Sbjct: 52  YSILGNPQWGWPVFAEWFLSPPVLSGLARTLVLTVLGAVFGFALGALVALARLSRSRLLA 111

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYI 271
                 + L      ++  L    L  L   +    P      F   +T +   F +  +
Sbjct: 112 ASAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFFAAVL 171

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAMR+I+P   +  
Sbjct: 172 GLTLNHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAMRAILPTAFNDL 231

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L K +S+   +   +L      I  +    I ++++    YL +  +++    ++   
Sbjct: 232 ITLAKGTSMVYVLAMPELFYTVQVIYRRNLDVIPLLMVATVWYLIILTVLSAIQVQVERH 291

Query: 392 IALK 395
            A  
Sbjct: 292 YARG 295



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +    +G LV   RLS ++L+A     +V +FR+IP       + 
Sbjct: 75  LSGLARTLVLTVLGAVFGFALGALVALARLSRSRLLAASAWTFVWLFRSIPL------IV 128

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 129 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFFAAVLGLTL 175


>gi|170699903|ref|ZP_02890932.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170135167|gb|EDT03466.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 222

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 99/176 (56%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  LY    L++G  T  LI  +      +  L  F       + P F+   + L  Y+
Sbjct: 41  GIGRLYPQRRLVYGFCTGYLIFFRGTPLLVQLFLLFFGLPQFDILLPAFVCGMLGLGLYS 100

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +IPPL ++++ L+KN
Sbjct: 101 AAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKN 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+L   +   DL+  G  II+ + +++E+ ++   +YL L+      ++R+  ++ 
Sbjct: 161 SALVSLLTIHDLMHEGQKIISVSYRSLEVYIVIALVYLVLTQTTNFILHRVERRLR 216


>gi|229061835|ref|ZP_04199166.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH603]
 gi|228717444|gb|EEL69111.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH603]
          Length = 219

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   V  F+LG +L+L      R  +           I T +  G 
Sbjct: 13  PYILKGLEVTLKIVAASAVVGFILGTLLALCKIARIRVLNIAA-------DIYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQMMGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGIPYSKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYILVIILTLVGKAIEGRMKKSD 219



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 38/80 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +  +  +   I+GTL+   +++  +++     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAASAVVGFILGTLLALCKIARIRVLNIAADIYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSVL 156
           R  P ++ +  +Y  V  ++
Sbjct: 63  RGTPLVLQLMIIYFGVPQMM 82


>gi|148253605|ref|YP_001238190.1| ABC transporter permease [Bradyrhizobium sp. BTAi1]
 gi|146405778|gb|ABQ34284.1| amino acid ABC transporter membrane protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 285

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 108/257 (42%), Gaps = 9/257 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +I  +  ++                       L     TM            LG+V+++ 
Sbjct: 33  IIIVMLGAIGRAFANGQIEWSYVERFLTAPVILRGIVNTMIMAVAAMALGIALGVVVAIM 92

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGST 261
                R       +++   Y   F   G P ++ + L + L    P +            
Sbjct: 93  -----RLSPNPVLRSVAAGYTWLF--RGTPLILQLLLWFNLALVFPTIGIPGLWSARAVD 145

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   F++  + L     A+ +E++R+GL++V  GQ EAA A+G+   +A R ++LPQAMR
Sbjct: 146 VMTPFLAALLGLGINQGAYTSEVMRAGLLSVDIGQYEAAQAIGMGRLQALRRIILPQAMR 205

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +IPPL ++++ L+K +SLA  + + +++     I     + IE++++    YL +  ++
Sbjct: 206 VVIPPLGNEFIGLVKATSLASVIQYPEVLHSAENIYYANSRVIELLIVAGLWYLLVVSIL 265

Query: 382 ALFMNRLNAKIALKEKK 398
                 L  + A    +
Sbjct: 266 TPLQMLLERRFARGLAR 282



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 33/75 (44%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y      A  IL G VNT  +A + M     +G +V   RLS N ++  +   Y  +FR 
Sbjct: 54  YVERFLTAPVILRGIVNTMIMAVAAMALGIALGVVVAIMRLSPNPVLRSVAAGYTWLFRG 113

Query: 139 IPPLVVIFFLYKSVL 153
            P ++ +   +   L
Sbjct: 114 TPLILQLLLWFNLAL 128


>gi|146307036|ref|YP_001187501.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145575237|gb|ABP84769.1| Diaminopimelate ABC transporter membrane protein / L-cystine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 222

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 13/189 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +     +     Y+S F   G P LV + L Y   +  P L                +
Sbjct: 45  RLYAIAPLRWFSRFYVSFF--RGTPLLVQLFLIY---YGLPQL--------GIQLDPLPA 91

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I  S   AA+ +EI+R+ + ++ RGQ EAA ++G++  +     +LPQA R+ +PPL 
Sbjct: 92  ALIGFSLNMAAYTSEILRAAIASIDRGQWEAAASIGMSKAQTLYRAILPQAARTALPPLG 151

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++L+K+++LA  +   +L      I  +T +   + L    IY +L+ ++A F  RL
Sbjct: 152 NSFISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWALASVLAHFQARL 211

Query: 389 NAKIALKEK 397
            A++   E+
Sbjct: 212 EARVNRHEQ 220



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 37/85 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G ++   RL A   + W  R YV  FR  P LV +F +
Sbjct: 16  LLKGALYTVVLSLGGMFFGLLLGFVLALLRLYAIAPLRWFSRFYVSFFRGTPLLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G  LN 
Sbjct: 76  YYGLPQLGIQLDPLPAALIGFSLNM 100


>gi|76812175|ref|YP_334236.1| histidine transport system permease [Burkholderia pseudomallei
           1710b]
 gi|76581628|gb|ABA51103.1| histidine transport system permease protein [Burkholderia
           pseudomallei 1710b]
          Length = 516

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + V S   G V ++    ++R    +        Y  T++  G P
Sbjct: 293 YWDGQRMSGLAVTLWLLVASLGAGFVCAVPL-AVARVSKNRWLSTPVRFY--TYVFRGTP 349

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + L Y   +    + +  ++  +     F    +A +  T A+  EI    + A+ 
Sbjct: 350 LYVQLLLLYTGMYSLAFVREHAWLD-AFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIA 408

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R V+LP ++R  +P  +++ + +L  +++A      D++ V 
Sbjct: 409 HGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTATVPDILKVA 468

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + T  A +   I   IYL++S  +     R    
Sbjct: 469 RDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 506



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 7/124 (5%)

Query: 83  SSYATAIL-------VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             +  A L        G   T WL  + +    +    +   R+S N+ ++   R Y  V
Sbjct: 285 QEFGRAFLYWDGQRMSGLAVTLWLLVASLGAGFVCAVPLAVARVSKNRWLSTPVRFYTYV 344

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR  P  V +  LY  + S+  + +H+ +  F     +  +    L             +
Sbjct: 345 FRGTPLYVQLLLLYTGMYSLAFVREHAWLDAFFRSGFHCAILAFALNTCAYTTEIFAGAI 404

Query: 196 LGIV 199
             I 
Sbjct: 405 RAIA 408


>gi|73541283|ref|YP_295803.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72118696|gb|AAZ60959.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 222

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                       ++   + VLG V+ L           +   ++   Y++      L   
Sbjct: 12  WPDIVHGAIVTVEVTACALVLGCVMGLLVGIGRLDPKRRVIYSICTAYVTFIRGTPLLV- 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                       +  L  F     + + P F+   I L  Y+ A+++EIVR  + +V +G
Sbjct: 71  ------------QLFLLFFGLPQFNIMLPAFVCGVIGLGVYSGAYVSEIVRGAIQSVEKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G++  +A R V+LPQA+  +IPPL ++++ L+KNS+L   +  ADL+  G  
Sbjct: 119 QMEAARSIGMSSGQAMRAVILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQK 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           II+ + +++E+ L    +YL L+    L + R   ++ + 
Sbjct: 179 IISVSYRSLEVYLAIALVYLILTSAAGLILRRAEQRLRMG 218



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEV 135
           + ++   S    I+ G + T  +    ++   ++G LVG GRL    +++  IC  YV  
Sbjct: 3   LDFSPVFSGWPDIVHGAIVTVEVTACALVLGCVMGLLVGIGRLDPKRRVIYSICTAYVTF 62

Query: 136 FRNI 139
            R  
Sbjct: 63  IRGT 66


>gi|153809859|ref|ZP_01962527.1| hypothetical protein RUMOBE_00240 [Ruminococcus obeum ATCC 29174]
 gi|149834037|gb|EDM89117.1| hypothetical protein RUMOBE_00240 [Ruminococcus obeum ATCC 29174]
          Length = 272

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 22/254 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFH----------- 212
            FG       L    L +     +F     FVL ++L+L      R F            
Sbjct: 20  NFGKIAPYAQLFRQGLLVTVLLSLFTVAIGFVLALILALMRMSNIRPFRALAVDRNGHLR 79

Query: 213 -----EKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
                    K  PL +I+T  +      P LV I + Y   F    L  F   G    + 
Sbjct: 80  EGGPLVWLSKFNPLSFIATAYVEILRSTPVLVQIFIIYYGVFGMIDLPSFQLFGFIKFN- 138

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F    +AL   + A++ EI+R+G+ ++ +GQ EAA +LGL+     R ++LPQA+++I+
Sbjct: 139 RFFPGVVALGMNSGAYLCEIMRAGIQSIDQGQTEAARSLGLSQTMNLRYIILPQALKNIL 198

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + ++++ ++K S++   +G  D++S    +   T   IE +L+   IY  L    +  
Sbjct: 199 PAIANEFVVIIKESAITYTIGVQDIMSAVNAVKGATFIIIEPLLVATAIYFCLCFPTSKL 258

Query: 385 MNRLNAKIALKEKK 398
           +     +++  +K+
Sbjct: 259 IAYFERRMSHGDKR 272



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 26/105 (24%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-------------------- 123
            YA     G + T  L+   +    ++  ++   R+S  +                    
Sbjct: 26  PYAQLFRQGLLVTVLLSLFTVAIGFVLALILALMRMSNIRPFRALAVDRNGHLREGGPLV 85

Query: 124 ------LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
                  +++I   YVE+ R+ P LV IF +Y  V  ++ +P   
Sbjct: 86  WLSKFNPLSFIATAYVEILRSTPVLVQIFIIYYGVFGMIDLPSFQ 130


>gi|326789760|ref|YP_004307581.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326540524|gb|ADZ82383.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 256

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 187 AKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
               +   ++G+V ++    R  +    K   A+   YI+ F   G P +V   + Y   
Sbjct: 33  ILGSIIGLLIGVVRTVPMPERGIKRILLKVINAILSAYIAFF--RGTPMIVQAMVIYYGS 90

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                      +          +    +S  T A++AEIVR G+I+V +GQ EAA A+G+
Sbjct: 91  ----------ALAFGMDMNVLGAAIFIVSINTGAYMAEIVRGGIISVDKGQFEAAQAIGM 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            H +  R V+LPQ +R+I+P   ++++  +K++S+   +   +L     ++     +  E
Sbjct: 141 NHLQTMRHVVLPQVIRNILPATGNEFVINIKDTSVLNVISVNELFFQTKSVAGNNFRYFE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   +Y  ++  +   +  +  K+
Sbjct: 201 SFFVACILYFIMTYTVTKILRYIEKKL 227



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 10/86 (11%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVY 132
           S+     L G   T  ++  G I  +IIG L+G  R              K++  I   Y
Sbjct: 11  STNGPMFLRGAGLTLLISMIGTILGSIIGLLIGVVRTVPMPERGIKRILLKVINAILSAY 70

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +  FR  P +V    +Y        +
Sbjct: 71  IAFFRGTPMIVQAMVIYYGSALAFGM 96


>gi|228992897|ref|ZP_04152822.1| Arginine transport system permease protein artQ [Bacillus
           pseudomycoides DSM 12442]
 gi|228998942|ref|ZP_04158525.1| Arginine transport system permease protein artQ [Bacillus mycoides
           Rock3-17]
 gi|229006473|ref|ZP_04164126.1| Arginine transport system permease protein artQ [Bacillus mycoides
           Rock1-4]
 gi|228754786|gb|EEM04178.1| Arginine transport system permease protein artQ [Bacillus mycoides
           Rock1-4]
 gi|228760817|gb|EEM09780.1| Arginine transport system permease protein artQ [Bacillus mycoides
           Rock3-17]
 gi|228766946|gb|EEM15584.1| Arginine transport system permease protein artQ [Bacillus
           pseudomycoides DSM 12442]
          Length = 219

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 112/224 (50%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 13  PYILKGLEVTLKIVAVSALVGFILGTLLALCKIARVRVLNIAA-------DLYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  ++        P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQMIGYDI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ +RK  + ++LPQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGVPYRKMMKNIILPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    +Y  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLVYYILVIILTLVGKAIEGRMKKSD 219



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  +++     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAVSALVGFILGTLLALCKIARVRVLNIAADLYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQM 81


>gi|91780725|ref|YP_555932.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693385|gb|ABE36582.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 221

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 17/221 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+   A     + V+G+V+ +      R   +   K +  +Y+  F     P
Sbjct: 16  YLLHGIWLTLAVTAVSLAVAIVIGLVIGIM-----RISSKGVLKRVAGVYVEVF--RNTP 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TLV +     +++  PVL   N    S       S   ALS  +AA++AEI R+G+ AVP
Sbjct: 69  TLVQLI---WVYYCLPVLTGINLSPTS-------SCIFALSINSAAYVAEIFRAGIQAVP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ+EAA ++G+++ KA R ++LPQA+R +IPP  +++++LLK SSL   +G ADL    
Sbjct: 119 SGQLEAARSIGMSYSKAMRKIILPQAVRQMIPPFVNEFVSLLKYSSLVSVLGVADLTYQA 178

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+   T + IEI      +Y  L   I+   + L  KI +
Sbjct: 179 QTLSTTTFRPIEIFTFIGVVYFLLCWAISAAAHVLEQKIRV 219



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  +    +  A +IG ++G  R+S+  ++  +  VYVEVFRN P LV + +
Sbjct: 16  YLLHGIWLTLAVTAVSLAVAIVIGLVIGIMRISSKGVLKRVAGVYVEVFRNTPTLVQLIW 75

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 76  VYYCLP 81


>gi|152976559|ref|YP_001376076.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152025311|gb|ABS23081.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 219

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 111/224 (49%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 13  PYILKGLEVTLKIVAVSALIGFILGTLLALCKIARIRVLNVAA-------DLYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  ++        P F++  IA S  + A+++E++R+G+ A+
Sbjct: 66  PLVLQLMIIY---FGVPQMIGYDI-------PAFLAAVIAFSLNSGAYMSEVIRAGIQAI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAAIALG+ + K  R ++LPQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAIALGVPYGKMMRHIILPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    +Y  L I++ +    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLVYYILVIVLTVVGKAIEGRMKKSD 219



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  +++     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAVSALIGFILGTLLALCKIARIRVLNVAADLYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQM 81


>gi|311279447|ref|YP_003941678.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308748642|gb|ADO48394.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 252

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 15/237 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYISTFL--IFG 231
            +    +T+       +   + G+ L L     + H   K   + L    +  ++    G
Sbjct: 16  FMEGAWMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYVLRYLVQFPVRFYVSAFRG 75

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP------------EFMSLYIALSCYTAA 279
            P  V I + +       +  +   +    +               F+S  +A++    A
Sbjct: 76  TPLFVQIMVVHFALIPLFINPRDGLLVTGGLMSSDFARALRADYGAFLSCIVAITLNAGA 135

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI R+G+ ++ +GQMEA+ ALG+   K+ R V+LPQA R I+PPL +  + ++K+SS
Sbjct: 136 YVSEIFRAGIQSIDKGQMEASCALGMPWWKSMRKVILPQAFRRILPPLGNNAIAIVKDSS 195

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           LA A+G ADL     T+        E  L    +Y  ++ ++A  +NRL  +    +
Sbjct: 196 LASAIGLADLAYAARTVSGAYATYWEPYLTISVVYWVITFLLAQLVNRLEKRFGKSD 252



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 10/129 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVY 132
             Y    + G   T       +I  T+ G  +G GR++             LV +  R Y
Sbjct: 10  QEYLPLFMEGAWMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYVLRYLVQFPVRFY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V  FR  P  V I  ++ +++ +   P   +++  G+  ++   +         + I   
Sbjct: 70  VSAFRGTPLFVQIMVVHFALIPLFINPRDGLLVTGGLMSSDFARALRADYGAFLSCIVAI 129

Query: 193 SFVLGIVLS 201
           +   G  +S
Sbjct: 130 TLNAGAYVS 138


>gi|121609959|ref|YP_997766.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554599|gb|ABM58748.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 221

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              KI   S VLG +  L          ++    +   Y++      L   + +      
Sbjct: 21  VTVKITATSLVLGCIFGLLVGMGRLDRSKRLRYGICTAYVTFIRGTPLLVQLFLLFFGLP 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            FD              + P F+   + L  Y+ A+++EIVR  + ++ +GQMEAA +LG
Sbjct: 81  QFD-------------ILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEAARSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  KA R ++LPQA+  +IPPL ++++ L+KNS+L   +  ADL+  G  II+ + +++
Sbjct: 128 MSSGKAMRTIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISVSYRSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E+ L    +YL L+ +  + + ++  ++ 
Sbjct: 188 EVYLAVALVYLVLTTLTGMALQKVEQRLR 216



 Score = 36.8 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA-WICRVYVEVFRNI 139
           +L G + T  +  + ++   I G LVG GRL  +K +   IC  YV   R  
Sbjct: 15  LLHGAIVTVKITATSLVLGCIFGLLVGMGRLDRSKRLRYGICTAYVTFIRGT 66


>gi|269214011|ref|ZP_05983392.2| L-cystine ABC transporter, permease protein [Neisseria cinerea ATCC
           14685]
 gi|269144798|gb|EEZ71216.1| L-cystine ABC transporter, permease protein [Neisseria cinerea ATCC
           14685]
          Length = 227

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 FV   ++ + ++L     S    ++    L   YIS  +I G P LV + + + 
Sbjct: 26  PLAIASFVIGMIIAVAVALVRIMPSGGIFQRCLLKLVEFYIS--VIRGTPLLVQLVIVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 84  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 133 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 193 LPVYIEAALVYWCFCKVLFLIQARLEERFDRY 224


>gi|283783516|ref|YP_003374270.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|283441667|gb|ADB14133.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
          Length = 333

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 12/262 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  ++V       + S++  P     +     +++  LS    T+       V S V  +
Sbjct: 31  IAGVIVAVIACSLLYSIITNPRFEWQVVGIYLISDNVLSGIGWTLLLTLIAMVISIVFAV 90

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
            L++      R       + +   +I  F    + T ++    +      +    P    
Sbjct: 91  GLAMM-----RKSVNPVLRGVSWFFIWFFRGTPVYTQLVFWGMFAVLVPRISIGIPFTSV 145

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I  + +     +  + LS   +A+++EIVR+GL AV  GQ+EAA ALG+      R
Sbjct: 146 EFWSIDSNVIMTSLTAAVVGLSLNESAYLSEIVRAGLEAVDSGQVEAAKALGMGRALTMR 205

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR I+PPL ++ + +LK +SL +AV F  +L      I N+  + I ++L+  
Sbjct: 206 RVILPQAMRIIVPPLGNETIGMLKTTSLVLAVPFTLELQFATNAIANRIYKPIPLLLVAS 265

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
             YL ++ ++ +    L    A
Sbjct: 266 IWYLIITSILMVLQYMLEKHFA 287



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+ + +    +   R S N ++  +   ++  FR  P    + F  
Sbjct: 68  LSGIGWTLLLTLIAMVISIVFAVGLAMMRKSVNPVLRGVSWFFIWFFRGTPVYTQLVFWG 127

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
              + V  I           F +    S  +  + T+    V    L
Sbjct: 128 MFAVLVPRISIGIP------FTSVEFWSIDSNVIMTSLTAAVVGLSL 168


>gi|253681319|ref|ZP_04862117.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           D str. 1873]
 gi|253562557|gb|EES92008.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           D str. 1873]
          Length = 235

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 10/233 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T+  +    + S + G V++L      +    K  K +  ++I  
Sbjct: 10  FLDMYLPFFLKGAGITIILSLITVLLSSIFGTVVALM-----KLSKIKILKVISTVFIE- 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTAAFIAE 283
            ++ G P LV + + Y    +              +  +F  L    I L+  + A++AE
Sbjct: 64  -IVRGTPLLVQVYIFYYGIPEVLEKLGIYLPQVDIMGNDFTGLFMIVITLALNSTAYVAE 122

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R G+ ++ +GQMEAA +LGLT   A R V++PQA+++I+P L ++++ ++K SS+   
Sbjct: 123 IIRGGIESINKGQMEAARSLGLTQSMAMRYVIIPQAIKNILPALGNEFITVIKESSIVSV 182

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           VG  +L+    T    T +     L    IY  L+  ++  +     ++ L +
Sbjct: 183 VGIKELMFNAKTASGATLKVFTPYLAAAAIYFVLTFTLSKLLGIFERRMKLSD 235



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 52/117 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G   T  L+   ++ ++I GT+V   +LS  K++  I  V++E+ R  P L
Sbjct: 12  DMYLPFFLKGAGITIILSLITVLLSSIFGTVVALMKLSKIKILKVISTVFIEIVRGTPLL 71

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           V ++  Y  +  VL      +     M  +  GL    +T+  N+  +V   + G +
Sbjct: 72  VQVYIFYYGIPEVLEKLGIYLPQVDIMGNDFTGLFMIVITLALNSTAYVAEIIRGGI 128


>gi|288574423|ref|ZP_06392780.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570164|gb|EFC91721.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 217

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 14/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +           K  + S VLG    L    + R       + L   YI  ++I G P
Sbjct: 10  PYIPMLLAGAWFTVKASLCSVVLGSAFGLIVGAI-RVVPFAPVRGLAATYI--YVIRGTP 66

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + L Y           F         P F++  I L   ++ ++ EIVR G+ AVP
Sbjct: 67  LLVQLFLIY-----------FGLPSLGINLPAFVAGIIGLGINSSGYVGEIVRGGIEAVP 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA+  LGL++ K+ R ++LPQA+RS++P + ++++ L+K SSL   +   +L   G
Sbjct: 116 KGQWEASKMLGLSYLKSMRYIILPQAIRSMLPAIGNEFVTLIKESSLLSTLAITELTMAG 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + + T  + E  +    IYL L+   +  +  L  + + +
Sbjct: 176 QQVRSVTYASFETFIAVGIIYLCLTSSTSFALQLLEKRWSTR 217



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 40/96 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   +L G   T   +   ++  +  G +VGA R+     V  +   Y+ V 
Sbjct: 3   LDFSILLPYIPMLLAGAWFTVKASLCSVVLGSAFGLIVGAIRVVPFAPVRGLAATYIYVI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           R  P LV +F +Y  + S+       +    G+ +N
Sbjct: 63  RGTPLLVQLFLIYFGLPSLGINLPAFVAGIIGLGIN 98


>gi|309812123|ref|ZP_07705881.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308433810|gb|EFP57684.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 310

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 15/270 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   V+   +   + SV+            +   +  L            + + S +L
Sbjct: 23  RWVALAVIAVLVAMMISSVVTNKAWDWPFVLKVMNYSPVLDGLLKGT---IIVTIVSMIL 79

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA----------LKYQLHF 246
           G+VL +    + R       + +  +YI  F       L+ I           L   + F
Sbjct: 80  GVVLGVIL-AIMRLSDNPVLRGVAFVYIWFFRAVPRYVLMTILGLGVLTLYPTLDLGVPF 138

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            K +   F  +   T+S       I L    AA++AEI R+G+++V  GQ EAA ALG++
Sbjct: 139 GKDLGLTFYTLDVKTISSGITVGIIGLGLSEAAYMAEIARAGILSVDNGQREAAQALGMS 198

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIE 365
           + KA R ++LPQAMR I+PP  ++ ++++K++SL  AV   A+L +    + N T + + 
Sbjct: 199 NGKAMRRIILPQAMRVIVPPTGNEAISMVKDTSLLTAVPVTAELFNQAQNVANNTYKVMP 258

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +  +  YL L  ++ L  + L  + A  
Sbjct: 259 SYVGALMWYLILCTLLMLLQSWLERRFARG 288



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 41/102 (40%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +    MI   ++G ++   RLS N ++  +  VY+  FR +P  V++  L   V
Sbjct: 66  LKGTIIVTIVSMILGVVLGVILAIMRLSDNPVLRGVAFVYIWFFRAVPRYVLMTILGLGV 125

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           L++ P  D  +     + L    L   T++      I     
Sbjct: 126 LTLYPTLDLGVPFGKDLGLTFYTLDVKTISSGITVGIIGLGL 167


>gi|257069824|ref|YP_003156079.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560642|gb|ACU86489.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 322

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 7/241 (2%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + VL +G              +     + + S VLG V++L A  + R       + + 
Sbjct: 48  RNPVLEWGTVATYLFDIKVVQGVGWTLLLTLLSMVLGTVVALTA-AIMRRSDNAVLRGVS 106

Query: 221 LLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
             YI  F    + T ++    +      +    P   +        +   F +  I L  
Sbjct: 107 WAYIFVFRGIPVYTQLVFWGLFTVIVPKIVIGVPFGPELLSFSTRDLLTAFWAAVIGLGL 166

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A++AEI+RSGL +V  GQ EA+ ALG+++ K  R +++PQAMR I+PPL ++ + +L
Sbjct: 167 NEGAYLAEIIRSGLNSVDTGQTEASKALGMSNGKILRRIIVPQAMRVIVPPLGNETIGML 226

Query: 336 KNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           K +SL +AV F  DL      I N+    I ++++    YL+++ ++ +    L      
Sbjct: 227 KTTSLVLAVPFTLDLTFATNGIANKLFTPIPLLIVAALWYLAITSVLMVGQYYLERYFGR 286

Query: 395 K 395
            
Sbjct: 287 G 287



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 39/112 (34%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    M+  T++       R S N ++  +   Y+ VFR IP    + F  
Sbjct: 67  VQGVGWTLLLTLLSMVLGTVVALTAAIMRRSDNAVLRGVSWAYIFVFRGIPVYTQLVFWG 126

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
              + V  I       P  +  + R L            +   +++  I+ S
Sbjct: 127 LFTVIVPKIVIGVPFGPELLSFSTRDLLTAFWAAVIGLGLNEGAYLAEIIRS 178


>gi|167562881|ref|ZP_02355797.1| amino acid ABC transporter, permease protein [Burkholderia
           oklahomensis EO147]
 gi|167570068|ref|ZP_02362942.1| amino acid ABC transporter, permease protein [Burkholderia
           oklahomensis C6786]
          Length = 219

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 103/225 (45%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L           K  V S VLG+V ++    L           L   Y+S  ++ G P
Sbjct: 9   QSLPVLLQGALLTVKFAVLSMVLGLVGAVAL-ALMGIGRSAVLAGLARAYVS--VMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + 
Sbjct: 66  LLVQIFVIY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGID 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 115 KGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSA 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             II  T Q + + L    +Y  L  ++         ++AL  + 
Sbjct: 175 QEIIASTYQPLPLYLAAAAVYWVLCQLLEWVQRWYERRLALPSRH 219



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 37/95 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   +    +    +  + ++A + R YV V R  P LV IF 
Sbjct: 13  VLLQGALLTVKFAVLSMVLGLVGAVALALMGIGRSAVLAGLARAYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +Y  + S+    D +      +  N       ++ 
Sbjct: 73  IYYGLPSLGISLDPTPAGVIALSANVAAYMSESMR 107


>gi|229165584|ref|ZP_04293359.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH621]
 gi|228617891|gb|EEK74941.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH621]
          Length = 218

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SFVLGI++++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVVALIGSFVLGIIMAVMRISPIRI----------LNWIGSAYVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  +AL+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITFNGFVAGTVALTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLVLTIPLSMLVRYLEKRLA 214



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + ++G ++   R+S  +++ WI   YVE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVVALIGSFVLGIIMAVMRISPIRILNWIGSAYVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|253576621|ref|ZP_04853949.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844035|gb|EES72055.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 251

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 17/240 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----RLSRHFH 212
              +  ++          L    +T+  +    +    +G++  +  T     R  +H+ 
Sbjct: 14  QMTYEWIIQIITDNWPMFLRGAGVTLYISLIGTMIGAAIGLLAGVIRTIPVPERGLKHWL 73

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K    L  +YI  F   G P +V     +           FN+    T      +    
Sbjct: 74  LKIVNGLLTIYIECF--RGTPMIVQAMAIFYGSSLL-----FNYDMDRTF-----AAIFI 121

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  T A++AEIVR G+ +V +GQ EAA A+G+TH +  R V+LPQ +R I+P   +Q++
Sbjct: 122 VSINTGAYMAEIVRGGIYSVDKGQFEAAHAIGMTHWQTMRNVVLPQVIRHILPATGNQFI 181

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +K++S+   +  ++L  +  +I     +  E   +   +YL +++ +   + R+  ++
Sbjct: 182 INIKDTSVLNVISVSELYFMTKSIAGNNFRYFESFFVASVLYLIMTLTVTKILQRIEKRL 241



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 10/77 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVEV 135
               L G   T +++  G +    IG L G  R               +V  +  +Y+E 
Sbjct: 28  WPMFLRGAGVTLYISLIGTMIGAAIGLLAGVIRTIPVPERGLKHWLLKIVNGLLTIYIEC 87

Query: 136 FRNIPPLVVIFFLYKSV 152
           FR  P +V    ++   
Sbjct: 88  FRGTPMIVQAMAIFYGS 104


>gi|15805592|ref|NP_294288.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6458260|gb|AAF10145.1|AE001914_7 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 226

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 14/226 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L              + + VLG+ L  FA  L+R       + L  L++S   I G 
Sbjct: 14  WHALPTLLAATPVTLGFALAAMVLGLPLG-FAVALARLSRLGWLRTLSGLFVSF--IRGT 70

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y                        +   IAL+   AA+++E +R+ ++++
Sbjct: 71  PLLVQIFVIYY-----------GLPSLGIQFSPVVGGVIALTLNAAAYLSETIRAAILSI 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA +LGL+  +  RL++LPQA R  +P L++  + L+K++SL   +   +L+  
Sbjct: 120 PPGQREAATSLGLSGAQTMRLIILPQAARVALPSLSNTLIGLVKDTSLVSVITVVELLRS 179

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +I +T +     L    IY  +S ++ +    L  + +    +
Sbjct: 180 AQLVIARTFEPFGPYLAAALIYWLVSSLLEVVQRALERRFSRGAAR 225



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            S       +L     T   A + M+    +G  V   RLS    +  +  ++V   R  
Sbjct: 11  QSAWHALPTLLAATPVTLGFALAAMVLGLPLGFAVALARLSRLGWLRTLSGLFVSFIRGT 70

Query: 140 PPLVVIFFLYKSVLSVLPI 158
           P LV IF +Y  + S+   
Sbjct: 71  PLLVQIFVIYYGLPSLGIQ 89


>gi|327438810|dbj|BAK15175.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 233

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 10/231 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LY 223
           + F  F     +              +     G +  +    +       T K +     
Sbjct: 1   MDFFDFFRWDIIWNYRELYAKGLWATIVLTACGYIGGIIFGLVLGLGQVSTKKWIYWPAK 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   +  G P LV + L          L     I G T    ++S  + L   +AA+ AE
Sbjct: 61  IYVDVFRGTPMLVQLLLI--------HLAVIPTIFG-TSQGWWVSGIVGLILNSAAYNAE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R+G+ ++ +GQMEAA +LGLT  +A R V+LPQA R +IPPL ++++ LLK+SSL   
Sbjct: 112 IFRAGIQSIDKGQMEAARSLGLTQSQAMRKVILPQAFRRMIPPLGNEFIALLKDSSLVTV 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  A+++ V   +     +  E  L   F+YL L+  +   +  +  ++ +
Sbjct: 172 IAGAEILYVSKVVAGTYQRFWEPYLFAAFLYLVLTYAVTKLIAFIERRVDI 222



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      G   T  L   G I   I G ++G G++S  K + W  ++YV+VFR  P L
Sbjct: 13  WNYRELYAKGLWATIVLTACGYIGGIIFGLVLGLGQVSTKKWIYWPAKIYVDVFRGTPML 72

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPF 167
           V +  ++ +V+  +        +  
Sbjct: 73  VQLLLIHLAVIPTIFGTSQGWWVSG 97


>gi|149375978|ref|ZP_01893744.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
 gi|149359615|gb|EDM48073.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
          Length = 223

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 13/230 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F        + +    +     I      +G VL +    LS +  +   +    
Sbjct: 2   EFQFQFDWQAAINAIPYLLKGVPYTLLISFGGLAIGFVLGIIFGLLSIN-KKWFLRWPAT 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YI  F   G P LV +   +              + G  + P   +   A++  + A+I
Sbjct: 61  AYIEIF--RGTPILVQVLFIFY---------GLPDLVGGPIDP-LTAGIAAIALNSGAYI 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+VR G+ ++ +GQ EA ++LGL+  +    V+ PQA R +IPPL +Q +  +K++SL 
Sbjct: 109 SEVVRGGVQSIDKGQTEAGLSLGLSRSQTFWSVVWPQAFRRMIPPLGNQAIVSIKDTSLF 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +G  +LV  G   I  T  A E+  +   +YL++++ ++L +  +  +
Sbjct: 169 SVIGVGELVRQGQVYIANTFTAFEVYFVVAIMYLAITLSLSLVLRLIERR 218



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 35/75 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++F G+    ++G + G   ++    + W    Y+E+FR  P LV + F
Sbjct: 18  YLLKGVPYTLLISFGGLAIGFVLGIIFGLLSINKKWFLRWPATAYIEIFRGTPILVQVLF 77

Query: 148 LYKSVLSVLPIPDHS 162
           ++  +  ++  P   
Sbjct: 78  IFYGLPDLVGGPIDP 92


>gi|163941903|ref|YP_001646787.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|163864100|gb|ABY45159.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
          Length = 219

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   V  F+LG +L+L      R  +           I T +  G 
Sbjct: 13  PYILKGLEVTLKIVAASAVVGFILGTLLALCKIARIRVLNIAA-------DIYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQMMGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGIPYSKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYILVIILTLVGKTIEGRMKKSD 219



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 38/80 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +  +  +   I+GTL+   +++  +++     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAASAVVGFILGTLLALCKIARIRVLNIAADIYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSVL 156
           R  P ++ +  +Y  V  ++
Sbjct: 63  RGTPLVLQLMIIYFGVPQMM 82


>gi|53719481|ref|YP_108467.1| putative ABC transporter membrane protein [Burkholderia
           pseudomallei K96243]
 gi|53723465|ref|YP_102926.1| amino acid ABC transporter permease [Burkholderia mallei ATCC
           23344]
 gi|121598882|ref|YP_993060.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia mallei SAVP1]
 gi|126441429|ref|YP_001058844.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 668]
 gi|126449548|ref|YP_001080332.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia mallei NCTC 10247]
 gi|126452898|ref|YP_001066090.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 1106a]
 gi|167719754|ref|ZP_02402990.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei DM98]
 gi|167738749|ref|ZP_02411523.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 14]
 gi|167815973|ref|ZP_02447653.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 91]
 gi|167824346|ref|ZP_02455817.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 9]
 gi|167845888|ref|ZP_02471396.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei B7210]
 gi|167894458|ref|ZP_02481860.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 7894]
 gi|167902859|ref|ZP_02490064.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167911102|ref|ZP_02498193.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 112]
 gi|167919122|ref|ZP_02506213.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei BCC215]
 gi|226196344|ref|ZP_03791926.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237812102|ref|YP_002896553.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242316328|ref|ZP_04815344.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254179932|ref|ZP_04886531.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254188663|ref|ZP_04895174.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254197266|ref|ZP_04903688.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|254260445|ref|ZP_04951499.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|52209895|emb|CAH35867.1| putative ABC transport system, membrane protein [Burkholderia
           pseudomallei K96243]
 gi|52426888|gb|AAU47481.1| amino acid ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|121227692|gb|ABM50210.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei SAVP1]
 gi|126220922|gb|ABN84428.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 668]
 gi|126226540|gb|ABN90080.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|126242418|gb|ABO05511.1| cystine ABC transporter, permease protein [Burkholderia mallei NCTC
           10247]
 gi|157936342|gb|EDO92012.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|169654007|gb|EDS86700.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|184210472|gb|EDU07515.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|225931561|gb|EEH27566.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237504828|gb|ACQ97146.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242139567|gb|EES25969.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254219134|gb|EET08518.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
          Length = 219

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L           K  V S + G+V ++    L      +    L   Y+S  ++ G P
Sbjct: 9   QSLPVLLQGALLTVKFAVLSMLFGLVGAVAL-ALMGIGRSRVLAGLARAYVS--VMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + 
Sbjct: 66  LLVQIFVVY---YGLPSL-------GVSLDPT-PAGVIALSANVAAYMSESMRGAINGID 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 115 KGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSA 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             II  T Q + + L    +Y  L  ++         ++AL  + 
Sbjct: 175 QEIIASTYQPLPLYLAAAAVYWVLCQILEWVQRWYERRLALPSRH 219



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   +    +    +  ++++A + R YV V R  P LV IF 
Sbjct: 13  VLLQGALLTVKFAVLSMLFGLVGAVALALMGIGRSRVLAGLARAYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 73  VYYGLPSL 80


>gi|117620816|ref|YP_857214.1| L-cystine ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117562223|gb|ABK39171.1| L-cystine ABC transporter, permease protein [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 225

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 112/233 (48%), Gaps = 14/233 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   + +      +  +     + + +FVLGIVL L    L+R +       L   Y
Sbjct: 1   MPAWLQLMIDSFWPLLSAGLIFTVPLTLITFVLGIVLGLSV-ALARLYGPAPLVMLVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +LI G P LV + L +                   V   F +  I  +    A+ +E
Sbjct: 60  V--WLIRGTPLLVQLFLIFY-----------GLPSAGIVLDAFTAAVIGFTLNIGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+ L A+P+GQ EAA ++G+   +    V+LPQA R  +PPL++ +++L+K++SLA A
Sbjct: 107 IIRATLAAIPKGQWEAAYSIGMNWPQVMWRVILPQAARIAVPPLSNTFISLVKDTSLAAA 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           V   +L      + + T + + + +    IYL  S +++   ++L  ++A KE
Sbjct: 167 VTVPELFQAAQRLASVTYEPLILYVETALIYLLFSSVLSTLQDKLEQRLAHKE 219



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 38/106 (35%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G + T  L     +   ++G  V   RL     +  + R YV + R  P L
Sbjct: 10  DSFWPLLSAGLIFTVPLTLITFVLGIVLGLSVALARLYGPAPLVMLVRFYVWLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           V +F ++  + S   + D       G  LN    S   +     A 
Sbjct: 70  VQLFLIFYGLPSAGIVLDAFTAAVIGFTLNIGAYSSEIIRATLAAI 115


>gi|134295623|ref|YP_001119358.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138780|gb|ABO54523.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 259

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF     +VL++   R S                L   Y+S  L+ G P LV I +
Sbjct: 55  VLSMVFGLFGAVVLAMMGIRQSEALEGFERIWVNALAWLARGYVS--LMRGTPLLVQIFV 112

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 113 IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 161

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 162 YSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAAT 221

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    +Y  L  ++         +++L  + 
Sbjct: 222 YQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPGRH 259


>gi|306832994|ref|ZP_07466126.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus bovis ATCC 700338]
 gi|304424893|gb|EFM28027.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus bovis ATCC 700338]
          Length = 228

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 119/232 (51%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +T+  +A +  F  ++GI+++L      +  + K    +   
Sbjct: 1   MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALV-----KRTNIKVLNWIASF 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+   +  F  +         +   I +S  + A+I
Sbjct: 56  YVWVF--RGTPMVVQIMIAFAWMHFNNAPIVGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+    A R V+LPQA+++I+P L ++++ ++K+SSL 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   +++  T   I  +L   F YL ++ +++  + RL  ++ 
Sbjct: 172 QTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVMSFLVKRLEKRMG 223



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y      G + T  ++   +   TIIG LV   + +  K++ WI   YV VF
Sbjct: 1   MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALVKRTNIKVLNWIASFYVWVF 60

Query: 137 RNIPPLVVIFFLYKSV 152
           R  P +V I   +  +
Sbjct: 61  RGTPMVVQIMIAFAWM 76


>gi|302524786|ref|ZP_07277128.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
 gi|302433681|gb|EFL05497.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. AA4]
          Length = 297

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 15/268 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   V++  L     ++         +P  +F     L      +         + VL
Sbjct: 17  RWVSAAVIVALLVLLGFALAQAQIEWGSVPDFVFYRVMALGLLNTVV-LAVIAQAIAIVL 75

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFN 255
           G++++L      R       K     YI  F   GLP L+ I + Y L    P V     
Sbjct: 76  GVLIALL-----RLSANPVAKWFAAAYIWLF--RGLPVLLQILIWYNLALIFPTVSIPLP 128

Query: 256 FIGGSTVSP------EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           F G     P       F +  + L+   +A++AEIVR+GL +V  GQ EAA ++G+T   
Sbjct: 129 FCGYLVHEPTNVLISAFTAALLGLALNESAYMAEIVRAGLTSVDAGQTEAAKSIGMTPGA 188

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQAMR IIPP  + ++N+LK +S+A  +G  +L+     I +     +E ++ 
Sbjct: 189 TLRRVVLPQAMRVIIPPTGNDFINMLKGTSMASVIGVTELIHAANNISSNNLLVMETLIA 248

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
               Y+ +  +  +  + L       ++
Sbjct: 249 AAIWYMVVVTVAGIGQHYLERSFGAADR 276



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 2/135 (1%)

Query: 69  GFEIDQGIVPY--TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           GF + Q  + +    D  +   + +G +NT  LA      A ++G L+   RLSAN +  
Sbjct: 32  GFALAQAQIEWGSVPDFVFYRVMALGLLNTVVLAVIAQAIAIVLGVLIALLRLSANPVAK 91

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           W    Y+ +FR +P L+ I   Y   L    +        + +      L          
Sbjct: 92  WFAAAYIWLFRGLPVLLQILIWYNLALIFPTVSIPLPFCGYLVHEPTNVLISAFTAALLG 151

Query: 187 AKIFVFSFVLGIVLS 201
             +   +++  IV +
Sbjct: 152 LALNESAYMAEIVRA 166


>gi|125547633|gb|EAY93455.1| hypothetical protein OsI_15254 [Oryza sativa Indica Group]
          Length = 434

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 4/196 (2%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G +L++    ++R    +  +    LY  T++  G P  V + + Y   +   ++    
Sbjct: 1   MGGLLAI-PMAVARVSSLRWVRFPVWLY--TYVFRGTPLYVQLLVFYSGMYSLEIVRGSE 57

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+  +          +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++
Sbjct: 58  FL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAANAYGFSRFKMYRCII 116

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LP A+R+ +P  +++ + +L +++LA      DL+ +   I   T Q      I   +YL
Sbjct: 117 LPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFYAFGIAAVLYL 176

Query: 376 SLSIMIALFMNRLNAK 391
            +S ++     +   +
Sbjct: 177 IISYVLISLFRKAEKR 192


>gi|90414856|ref|ZP_01222822.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90324034|gb|EAS40625.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 275

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 19/273 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             +++ + ++ +     I  L               IP +   +  G +     L    +
Sbjct: 19  KPVLSGLLQIALVTLGLIWLLNAGAEAMNYRWQWYRIPQYLWFIEDGEWFPAELLEGLFV 78

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    +F+ ++G+V +L      R      G+ L   YI   LI   P LV I L 
Sbjct: 79  TLKISTVSLIFTLIIGLVTALL-----RLSGSIVGRGLARGYIE--LIRNTPLLVQIYLL 131

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +ALS +  A+ AEI R+GL  +P+GQ EA  
Sbjct: 132 YFVF------------GPVLGLERFTTAVLALSLFQGAYTAEIFRAGLNNIPKGQFEACS 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+     R V+LPQ +R I+PPLT++ ++L+KNSS+   +   DL + G  I+  T 
Sbjct: 180 SLGLSAIDGYRFVILPQMIRRILPPLTNETVSLVKNSSIVSIMAIFDLTTEGRNIVADTA 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              E+      IYL +++M++ F   L  K+ +
Sbjct: 240 MPFEVWFTVAGIYLCVTLMLSGFAAWLEHKMNV 272



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 79  YTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +  D  +  A +L G   T  ++   +I   IIG +    RLS + +   + R Y+E+ R
Sbjct: 61  FIEDGEWFPAELLEGLFVTLKISTVSLIFTLIIGLVTALLRLSGSIVGRGLARGYIELIR 120

Query: 138 NIPPLVVIFFLYKSV 152
           N P LV I+ LY   
Sbjct: 121 NTPLLVQIYLLYFVF 135


>gi|78358111|ref|YP_389560.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220516|gb|ABB39865.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 309

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 115/255 (45%), Gaps = 15/255 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV F L  +         H  +                  +    K+   S VL  V+ L
Sbjct: 63  VVWFTLRGTEQLGYHWQWHRALRYLADTRGGWHAGPLLQGLLVTFKVSAVSLVLAAVIGL 122

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
            A  L R      G+AL + Y+ T  +   P L+ + + Y +            +   T 
Sbjct: 123 AAVLL-RLSRSVVGRALAVCYLET--VRNTPLLIQLFVMYFV------------VAPLTG 167

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F S  +ALS +  A+I+EI+R+G+ AVP GQ EAA +LGLT     R V+LPQA+  
Sbjct: 168 MDRFFSAVLALSLFEGAYISEIIRAGIQAVPAGQWEAARSLGLTRAATYRKVVLPQALGH 227

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PPLT Q + L+K+S+L   +   DL      II +T    EI  +   +YL +++ ++
Sbjct: 228 VLPPLTGQMVTLVKDSALVSTIAIYDLTMQAQAIIAETFLVFEIWFMVAAMYLVVTLSLS 287

Query: 383 LFMNRLNAKIALKEK 397
           L   RL  ++    K
Sbjct: 288 LLAQRLECRLRTGSK 302



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 13/151 (8%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
               R  V       + + D R       ++   ++T +  + +             LG 
Sbjct: 25  AAKGRCRVRLPVRIWRAVTDARRPWAVDMMLYLAVMTGVVWFTLRGTEQ--------LGY 76

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            +   RA        +  T    +A  +L G + TF ++   ++ A +IG      RLS 
Sbjct: 77  HWQWHRA-----LRYLADTRGGWHAGPLLQGLLVTFKVSAVSLVLAAVIGLAAVLLRLSR 131

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           + +   +   Y+E  RN P L+ +F +Y  V
Sbjct: 132 SVVGRALAVCYLETVRNTPLLIQLFVMYFVV 162


>gi|330819484|ref|YP_004348346.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327371479|gb|AEA62834.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 222

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 99/176 (56%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  LY    L++G  T  LI  +      +  L  F       + P F+   + L  Y+
Sbjct: 41  GIGRLYPHRRLVYGFCTGYLIFFRGTPLLVQLFLLFFGLPQFGILLPAFVCGVLGLGLYS 100

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+++EIVR  + +V RGQMEAA ++G++  +A R ++LPQA+  +IPPL ++++ L+KN
Sbjct: 101 AAYVSEIVRGAIQSVDRGQMEAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKN 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+L   +   DL+  G  II+ + +++E+ ++   +YL L+      ++R+  ++ 
Sbjct: 161 SALVSLLTIDDLMHEGQKIISVSYRSLEVYIVIALVYLVLTQTTNFILHRVERRLR 216


>gi|323257342|gb|EGA41040.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
          Length = 199

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 95/191 (49%), Gaps = 2/191 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R       + LP + +  F+ FG   L+L ++  + LH     +     I    VSP F+
Sbjct: 8   RLRAGHYLRGLPEILVVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FL 66

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              IALS   AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L
Sbjct: 67  CGVIALSLLYAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGL 126

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q+L LLK+++L   +   DL+    +I  +T +     +I   IYL ++++    + R
Sbjct: 127 GNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKR 186

Query: 388 LNAKIALKEKK 398
           ++ +    E++
Sbjct: 187 IDLRATRFERR 197


>gi|297624237|ref|YP_003705671.1| polar amino acid ABC transporter inner membrane subunit [Truepera
           radiovictrix DSM 17093]
 gi|297165417|gb|ADI15128.1| polar amino acid ABC transporter, inner membrane subunit [Truepera
           radiovictrix DSM 17093]
          Length = 613

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 2/208 (0%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
             T    R+ F  +++V  I  Q+I   L+ + F    NNV   +E++N+     FL  R
Sbjct: 7   RPTGGKERIPFYRNVKVIGILAQLIFLALVVMGFWVLYNNVTTALERANIPANFNFLRAR 66

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AG  I +  + Y +  +YA A+ VG +NT  ++  G++ AT++G LVG  RLS+N L+  
Sbjct: 67  AGIPIGESPIRYNTADTYARALWVGVLNTLKVSLVGVVLATLLGILVGVMRLSSNWLLRQ 126

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVL-SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           I  +YVE  RN P  V + F + +VL  + P     I LP G + +  GL+ P L    +
Sbjct: 127 IASIYVETIRNTPLAVQLVFWFFAVLVPLPPRISGPIELPGGAYFSQVGLALPWLYPSYS 186

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEK 214
              +V  +++G V         R    +
Sbjct: 187 FSAWV-PWLVGAVALFVLLVWVRWVQIR 213



 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 70/155 (45%), Positives = 104/155 (67%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L    P + + ++ GG  ++  FM+L + L  YTA+FIAEIVR G+ AV +GQ EAA +
Sbjct: 459 PLVLSVPTIPRSDYEGGVRLTAAFMALLLGLVIYTASFIAEIVRGGIQAVNKGQREAAKS 518

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+  +   LV+ PQA+R I+PPL SQYLNL KNSSLA+ + + D  ++G  + NQTG 
Sbjct: 519 LGLSDAQTFNLVVFPQALRIILPPLISQYLNLTKNSSLALLITYPDFFAIGRIVANQTGA 578

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + IILI +  YL++S++ A  +N +N ++AL E+
Sbjct: 579 TVPIILIIIAGYLTISLIFAFILNIVNERLALVER 613


>gi|226941143|ref|YP_002796217.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Laribacter hongkongensis HLHK9]
 gi|226716070|gb|ACO75208.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Laribacter hongkongensis HLHK9]
          Length = 247

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 10/230 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FG 231
            +    +T+       V   ++G+ + +     +RH   K      + + +T  +    G
Sbjct: 15  FIDGVKMTLGITVIAVVLGTLIGLFMGMARLADARHGMGKYLLRYCVKWPATAYVTFFRG 74

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-------SPEFMSLYIALSCYTAAFIAEI 284
            P  V I L +       V      +    +          F S  +AL+    A+I EI
Sbjct: 75  TPLFVQILLVHFALMPTLVHPVDGILISGDLAREIRQNYGAFFSGLLALTLNAGAYITEI 134

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G++++ +GQMEAA +LG+++ +A R V++PQA R ++PPL ++ + LLK+SSL  A+
Sbjct: 135 FRAGILSIDKGQMEAARSLGMSYGQAMRFVVVPQAFRRMLPPLGNEAIMLLKDSSLVSAI 194

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L     T+     +  E  L   F+YL+L++++A  +  L  +  +
Sbjct: 195 GLAELAFAARTVAGVYSRYWEPYLTISFMYLALTMLMAWGIAALEKRYRV 244



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------VAWICRVYVE 134
           YA   + G   T  +    ++  T+IG  +G  RL+  +           V W    YV 
Sbjct: 11  YAPLFIDGVKMTLGITVIAVVLGTLIGLFMGMARLADARHGMGKYLLRYCVKWPATAYVT 70

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR  P  V I  ++ +++  L  P   I++   +    R       +      +   ++
Sbjct: 71  FFRGTPLFVQILLVHFALMPTLVHPVDGILISGDLAREIRQNYGAFFSGLLALTLNAGAY 130

Query: 195 VLGIVLS 201
           +  I  +
Sbjct: 131 ITEIFRA 137


>gi|169334520|ref|ZP_02861713.1| hypothetical protein ANASTE_00923 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259237|gb|EDS73203.1| hypothetical protein ANASTE_00923 [Anaerofustis stercorihominis DSM
           17244]
          Length = 217

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 9/209 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ + S VLG++L+L    +S     K  K +   +I T++  G P L+ I + Y   F
Sbjct: 17  IELTLISIVLGMILALVIAFMS-IGRNKILKGIA--WIYTWVFRGTPLLLQIMVVY---F 70

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P++ +   +G       F +  IAL+  TAA+ +EI R+G+ ++ +GQMEAA ALG+T
Sbjct: 71  AIPLMVK-QMVGSPLNFEPFTAAIIALTLNTAAYTSEIFRAGIQSIDKGQMEAAKALGMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A   V++PQ +  +IPP  ++++ +LK++SL   +G ADL+ V          +   
Sbjct: 130 YSQAMFKVIIPQTVSRVIPPFANEFIMILKDTSLVSTIGMADLMRVSKQFAASGDWSY-- 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   IYL L+ +  +   RL  K +  
Sbjct: 188 YFVAGGIYLVLTSVCIVLFQRLEKKTSRY 216



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 33/71 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V+T  L    ++   I+  ++    +  NK++  I  +Y  VFR  P L+ I  +
Sbjct: 9   LAAGTVSTIELTLISIVLGMILALVIAFMSIGRNKILKGIAWIYTWVFRGTPLLLQIMVV 68

Query: 149 YKSVLSVLPIP 159
           Y ++  ++   
Sbjct: 69  YFAIPLMVKQM 79


>gi|308235208|ref|ZP_07665945.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
 gi|311114810|ref|YP_003986031.1| ABC transporter system, permease [Gardnerella vaginalis ATCC 14019]
 gi|310946304|gb|ADP39008.1| ABC superfamily ATP binding cassette transporter system, permease
           protein [Gardnerella vaginalis ATCC 14019]
          Length = 330

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 16/245 (6%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +     +++  L+    T+       + + VL I L++      R       +
Sbjct: 47  NPRFEWNVVGIYLISDNVLTGIAWTLILTFLSMIIAIVLAIGLAMM-----RKSVNPVLR 101

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--------GQFNFIGGSTVSPEFMSL 269
           A+   +I  F   G P    +          P L         +F  I  + V     + 
Sbjct: 102 AVSWFFIWFF--RGTPVYTQLVFWGMFAVLVPKLSMGIPFTSVEFFSIDSNVVMTSLNAA 159

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I LS   AA+++EIVR+GL AV  GQ+EAA ALG+      R V+LPQAMR I+PPL +
Sbjct: 160 VIGLSLNEAAYLSEIVRAGLEAVDAGQVEAAQALGMGRSLTMRRVVLPQAMRIIVPPLGN 219

Query: 330 QYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + + +LK +SL +AV F  +L      + N+  + I ++++    YL ++ ++ +F   L
Sbjct: 220 ETIGMLKTTSLVLAVPFTLELQFATNAVANRIYKPIPLLIVASIWYLIITSILMVFQVML 279

Query: 389 NAKIA 393
                
Sbjct: 280 EKHFG 284



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L F  MI A ++   +   R S N ++  +   ++  FR  P    + F  
Sbjct: 65  LTGIAWTLILTFLSMIIAIVLAIGLAMMRKSVNPVLRAVSWFFIWFFRGTPVYTQLVFWG 124

Query: 150 KSVLSVLP 157
              + V  
Sbjct: 125 MFAVLVPK 132


>gi|50086449|ref|YP_047959.1| amino acid ABC transporter ATP-binding protein [Acinetobacter sp.
           ADP1]
 gi|49532425|emb|CAG70137.1| putative amino acid transport protein (ABC superfamily, ATP_bind
           and membrane) [Acinetobacter sp. ADP1]
          Length = 505

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 55/240 (22%), Positives = 104/240 (43%), Gaps = 14/240 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +       G+ LN          ++ +  +++   +LG VL+      ++    K    
Sbjct: 1   MEFDWTYTLGLLLNKNFWMATWTVIELSILVWLIGILLGFVLAF-----AKQSSFKPLAW 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +   YI  F    L           L      L Q        ++  F++  IA++   A
Sbjct: 56  MSGTYIWFFRSLPLLV---------LLVFVYNLPQIFPASSVVLASPFLAGLIAMTLSEA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI R GL ++ +GQ+EA  ALG+      R +++PQA R  +P L ++Y++++K +
Sbjct: 107 AYIAEIHRGGLTSITKGQIEAGKALGMKSLGIQRFIVIPQAFRVALPSLANEYVSIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL   +   +++ VG  +  Q    +E +L   F Y+ +  +    +     KI +  +K
Sbjct: 167 SLVSVISLTEILLVGQRLYTQNFLVLETMLAVAFYYVLIVTVFGWLIQWFEHKIDVTNRK 226



 Score = 36.8 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
             +       L+    +   ++G ++   + S+ K +AW+   Y+  FR
Sbjct: 17  FWMATWTVIELSILVWLIGILLGFVLAFAKQSSFKPLAWMSGTYIWFFR 65


>gi|255598386|ref|XP_002536997.1| abc transporter, putative [Ricinus communis]
 gi|223517868|gb|EEF25387.1| abc transporter, putative [Ricinus communis]
          Length = 390

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 43/131 (32%), Positives = 69/131 (52%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F S  IALS    A++AEI+RSGL AV +GQ  A +ALG++     R +++PQA R ++
Sbjct: 4   AFASAVIALSLNEGAYMAEIIRSGLQAVKKGQRTAGLALGMSRFAVMRYIVIPQAARIVL 63

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP  +Q + +LK S+L   V   +L+ V     +   +  E +      YL+L+ +   F
Sbjct: 64  PPTGNQMIGMLKTSALVSVVAVEELLLVANQTASSNFKYFEALTAAGIYYLALTTIFMGF 123

Query: 385 MNRLNAKIALK 395
              L   +  +
Sbjct: 124 QFLLERALDRR 134


>gi|241206848|ref|YP_002977944.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860738|gb|ACS58405.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 226

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SFV G+ L L AT ++R F      A+   Y+  ++I G P LV + 
Sbjct: 17  WAGLIFTIPLTLLSFVFGLALGL-ATAIARLFGPMPLSAVARFYV--WVIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  VIFY-----------GLPSLGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL LS +++    RL  + A  
Sbjct: 183 TYEPLILYIEAALIYLVLSSVLSQLQVRLERRFARY 218



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L     +    +G      RL     ++ + R YV V R  P LV +F +
Sbjct: 16  LWAGLIFTIPLTLLSFVFGLALGLATAIARLFGPMPLSAVARFYVWVIRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 76  FYGLPSLGILLDAFPAALIGFTLN 99


>gi|15614025|ref|NP_242328.1| ABC transporter (permease) [Bacillus halodurans C-125]
 gi|10174079|dbj|BAB05181.1| ABC transporter (permease) [Bacillus halodurans C-125]
          Length = 218

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 18/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+   +   +F  VLGIVL++F     +    +  +     Y S F   
Sbjct: 11  FMPFMLEGVWVTLQFVSVSLLFGLVLGIVLAIF-----KISKYRLFRWFADFYTSIF--R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ + + Y        L QF          +F + ++A    +AA+++EI+R+G+ 
Sbjct: 64  GTPLILQLLMIYL------ALPQFG-----VDISQFQAAFLAFGLNSAAYVSEIIRAGIQ 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EAA ALG+ +R     ++LPQAMR+I+P L ++++NL K S++   +G  DL+
Sbjct: 113 AVDKGQREAAEALGIPYRPMMLRIILPQAMRNILPALFNEFINLTKESAIVSVIGVTDLM 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                   +T   +E +L    IY  L + + +    L  ++   +
Sbjct: 173 RRAQITSAETYLYLEPLLFVGLIYYVLVMGLTVIGRLLERRLKRSD 218



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 37/110 (33%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    +   +L G   T       ++   ++G ++   ++S  +L  W    Y  +FR
Sbjct: 4   DFSRIQPFMPFMLEGVWVTLQFVSVSLLFGLVLGIVLAIFKISKYRLFRWFADFYTSIFR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             P ++ +  +Y ++                  LN+       +     A
Sbjct: 64  GTPLILQLLMIYLALPQFGVDISQFQAAFLAFGLNSAAYVSEIIRAGIQA 113


>gi|309790934|ref|ZP_07685476.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
 gi|308227048|gb|EFO80734.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
          Length = 266

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 125/258 (48%), Gaps = 12/258 (4%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N+  L   F +   +++ +     +  L  G+F  N  L     T+   A  F+F+ + G
Sbjct: 20  NLVHLPWWFVIILGIIAFMAFRIMTDPLHQGIF--NTILQGLGTTLYVTAVSFIFALIFG 77

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           + L L      R       + L + YI    I G+P LVLI   + + F    L   +F 
Sbjct: 78  LFLGL-----GRVASNPIIRNLTITYIEF--IRGVPMLVLI---FTISFAVVPLFAESFG 127

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             +          IAL     A+IAEI R+G+ ++ RGQ EAA +LG++  +A   V+LP
Sbjct: 128 LANNAISLTTRAIIALVLIYGAYIAEIFRAGIESISRGQSEAARSLGMSRAQAMFYVILP 187

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R+++P L +  + LLK++SL   +G  ++  V    ++ + +  E   I    YLS+
Sbjct: 188 QAVRNVMPALGNDLIALLKDTSLVSVLGVREMTQVARLSVSTSFRYEETYFILTLFYLSM 247

Query: 378 SIMIALFMNRLNAKIALK 395
           +++++L +  L  ++  +
Sbjct: 248 TLVLSLILQWLQRRVGAR 265



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T ++     I A I G  +G GR+++N ++  +   Y+E  R +P LV+IF +
Sbjct: 55  ILQGLGTTLYVTAVSFIFALIFGLFLGLGRVASNPIIRNLTITYIEFIRGVPMLVLIFTI 114

Query: 149 YKSVL 153
             +V+
Sbjct: 115 SFAVV 119


>gi|291563078|emb|CBL41894.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [butyrate-producing
           bacterium SS3/4]
          Length = 229

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 11/234 (4%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +L   M   N  L    +T+       + S V G +++L           K  + +  +Y
Sbjct: 7   MLKVWMKYWNLFLQGLGMTLFMGLLTVLISTVFGSLMALMRRSNVGIGKFKPLRLIATVY 66

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   +I G P L+ +   Y  +F  P    F  +       EF  +  A    + A++ E
Sbjct: 67  VE--IIRGTPILLQL---YFFYFMLPTWLPFFNL------SEFTCVMTACCVNSTAYVCE 115

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR+G+ AV  GQ EAA +LGL  R+    ++LPQA+++I+P L ++++ ++K +SLA  
Sbjct: 116 IVRAGIQAVDVGQTEAARSLGLNARQTMIHIVLPQAVKNILPALCNEFVAIVKETSLAST 175

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               +L++   TI   T + +E + I   IY  ++ +++  +  L  ++   E+
Sbjct: 176 FFIGELMTQFKTINGLTFRVLEPLTIVGIIYFGVTFIMSKLIALLERRMNASER 229



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAWICRVYVEVFRNI 139
           Y    L G   T ++    ++ +T+ G+L+   R S       K +  I  VYVE+ R  
Sbjct: 14  YWNLFLQGLGMTLFMGLLTVLISTVFGSLMALMRRSNVGIGKFKPLRLIATVYVEIIRGT 73

Query: 140 PPLVVIFFLYKSVLSVLPIPD 160
           P L+ ++F Y  + + LP  +
Sbjct: 74  PILLQLYFFYFMLPTWLPFFN 94


>gi|111018891|ref|YP_701863.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110818421|gb|ABG93705.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 222

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                 T+     + + SF +G+V++L    L+R    +    +   Y+S  +I G P L
Sbjct: 14  WPMLKATVTMTIPLTIISFTIGLVIALL-MALARISSIRPLSVIARFYVS--IIRGTPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +        L QF       V   F +  IA S     + AE++RS ++++P+G
Sbjct: 71  VQLFIVFY------ALPQFG-----VVLDPFPAAVIAFSLNVGGYAAEVIRSAILSIPKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+ +    + ++LPQA R  +PPL++  ++L+K++SLA  +   +L+ V   
Sbjct: 120 QWEAAQTIGMGYTTTLQRIVLPQAARVAVPPLSNTLISLVKDTSLASTILVTELLRVAQL 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               T     +  +    Y  + I ++    RL A++   
Sbjct: 180 AAAPTFDFFALYSVAALYYWVICIFLSAVQGRLEARLDRY 219



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L         +I  L+   R+S+ + ++ I R YV + R  P LV +F ++ ++   
Sbjct: 24  TIPLTIISFTIGLVIALLMALARISSIRPLSVIARFYVSIIRGTPLLVQLFIVFYALPQF 83


>gi|291459896|ref|ZP_06599286.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417237|gb|EFE90956.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 228

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 16/235 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP---LL 222
            +  F+ ++        +     I VF+ ++G+ L L    + R   ++TGK        
Sbjct: 7   FYVDFVKDQRWMDLFGGLLNTMTITVFALLIGVALGLLI-AIIRTTADRTGKWRIPDFFC 65

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            I   +I G PT++ + + Y   F                        IA    +AA++A
Sbjct: 66  RIYLTVIRGTPTMIQLMIFYYCIFV------------GRFFSGVFVASIAFGLNSAAYVA 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+RSG++++P GQMEA  +LG  + +  R +++PQA ++++P + ++++ L+K +++A 
Sbjct: 114 EIIRSGILSIPAGQMEAGRSLGFNYVETMRYIIMPQAFKNVLPAIFNEFIVLIKETAVAG 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            V   DL      I  QT  A   +L    IYL L++       +L  ++   E+
Sbjct: 174 YVSVRDLTKGADNIRAQTYDAWLPLLAAGLIYLILTMFFTTLEKKLERRLKQGER 228



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW---- 127
           ID+  V +  D  +   +  G +NT  +    ++    +G L+   R +A++   W    
Sbjct: 4   IDRFYVDFVKDQRWMD-LFGGLLNTMTITVFALLIGVALGLLIAIIRTTADRTGKWRIPD 62

Query: 128 -ICRVYVEVFRNIPPLVVIFFLYKSVL 153
             CR+Y+ V R  P ++ +   Y  + 
Sbjct: 63  FFCRIYLTVIRGTPTMIQLMIFYYCIF 89


>gi|311232935|gb|ADP85789.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 314

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 4/188 (2%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE----FM 267
           +  + + LP L +   + F + +LVL AL  +        G    +G      E    F+
Sbjct: 126 YVDSVRNLPALVLIFVMYFFISSLVLPALGLEESVRGLPPGGRAVVGWLFAPVEQLSAFL 185

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  + L+ Y  A+I+EIVR+G+ +VPRGQ +A+ + GL   +  R V+LPQA+R  +PPL
Sbjct: 186 SAVVTLAIYEGAYISEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRHAVPPL 245

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             Q+++++K+S++   +   +L   G  ++  T Q  EI      +YL L++  +L   R
Sbjct: 246 AGQFISIIKDSAIVSVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCSLVAER 305

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 306 LERRFRWG 313


>gi|313668732|ref|YP_004049016.1| amino acid permease integral membrane protein [Neisseria lactamica
           ST-640]
 gi|309379366|emb|CBX21933.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313006194|emb|CBN87656.1| putative amino acid permease integral membrane protein [Neisseria
           lactamica 020-06]
 gi|325134066|gb|EGC56721.1| L-cystine ABC transporter, permease protein [Neisseria meningitidis
           M13399]
          Length = 238

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 FV   ++ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 37  PLAIASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYIS--VIRGTPLLVQLVIVFY 94

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 95  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 143

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 144 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 203

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 204 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 235


>gi|311898347|dbj|BAJ30755.1| putative ABC transporter ATP-binding protein [Kitasatospora setae
           KM-6054]
          Length = 337

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +   + +      + SV   P     +          L    LT+   A +    F 
Sbjct: 50  WRYVSGGLALLAAGLVLRSVASNPAFEWSVVGSYLSAPSVLRGLLLTLWLTAAVVALGFA 109

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG +L++     +R       ++L   ++  F     P LV + L Y +    P L    
Sbjct: 110 LGTLLAV-----ARLSDNPVLQSLSWGFVWLF--RATPLLVQLLLWYNIGALYPTLSLSL 162

Query: 256 FIGG-------STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             GG         +    ++  I L+ + AAF AE+VRSG+++V +GQ+EAA +LGL   
Sbjct: 163 PFGGELFSVKTVNLLGPVLTTLIGLTLHEAAFAAEVVRSGVLSVDQGQLEAASSLGLGRA 222

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMR+I+PP  +  +  LK +++   +   DL+     I NQT Q I ++L
Sbjct: 223 RVLRRIVLPQAMRAILPPAGNMLIGTLKGTAVISVLAVHDLLFSVQVIYNQTYQVIPLLL 282

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y++++ ++++    L    A    +
Sbjct: 283 VATLWYVAVTSVLSVGQYYLERYFARGATR 312



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             + +     +GTL+   RLS N ++  +   +V +FR  P LV +   Y   
Sbjct: 100 TAAVVALGFALGTLLAVARLSDNPVLQSLSWGFVWLFRATPLLVQLLLWYNIG 152


>gi|300313611|ref|YP_003777703.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076396|gb|ADJ65795.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 247

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 113/229 (49%), Gaps = 13/229 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRH----FHEKTGKALPLLYISTFLIFGLPTLV 236
           +T+  +    +   V+G+++ +      +H    +  K+ + L   Y++ F   G P  V
Sbjct: 21  MTLQVSLISILIGTVIGLLVGMLRLAEVQHGPWKWPLKSMRWLAGFYVAFF--RGTPLFV 78

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTV-------SPEFMSLYIALSCYTAAFIAEIVRSGL 289
            I L +       V  +   +    +          F+S  +ALS    A+I+EI R+G+
Sbjct: 79  QIMLIHFAVMPVLVQQEHGLLITGELARTIKQDYGAFLSGTVALSLNAGAYISEIFRAGI 138

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ RGQ  AA +LG+ +    R V+LPQA R ++PPL ++ + LLK+SSL  A+G A+L
Sbjct: 139 QSIERGQSYAAASLGMNYGLTMRYVVLPQAFRRMLPPLGNEAITLLKDSSLVSAIGLAEL 198

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                T+     +  E  +    +Y S++I +AL + RL +K +   ++
Sbjct: 199 AYAARTVAGTYARYWEPYITISVLYFSMTICLALVVARLESKYSAPHRR 247



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 9/120 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS---------ANKLVAWICRVYVEV 135
           YA     G + T  ++   ++  T+IG LVG  RL+           K + W+   YV  
Sbjct: 11  YAPLFAKGVLMTLQVSLISILIGTVIGLLVGMLRLAEVQHGPWKWPLKSMRWLAGFYVAF 70

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR  P  V I  ++ +V+ VL   +H +++   +    +      L+      +   +++
Sbjct: 71  FRGTPLFVQIMLIHFAVMPVLVQQEHGLLITGELARTIKQDYGAFLSGTVALSLNAGAYI 130


>gi|169835617|ref|ZP_02868805.1| Amino acid transport system permease protein [candidate division
           TM7 single-cell isolate TM7a]
          Length = 194

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 11/173 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I   +I G P LV + + Y + F           G     P+     IA      A+
Sbjct: 29  LGKIYVDIIRGTPLLVQLLIMYYVVF-----------GSYNFMPKIFVAAIAFGINAGAY 77

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I EI+R G+ ++  GQMEAA +LGL+  +A RLV+LPQA+++ +P L S+++ LLK +S+
Sbjct: 78  IGEIIRGGIESIDNGQMEAARSLGLSSWQAMRLVILPQALKNSLPSLISEFIALLKETSI 137

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +G  D++     I  QT  A E +     IYL+L+ +      R+  K+ 
Sbjct: 138 VGWIGLNDIMRGADNIRFQTATAFESLFAAALIYLALTAIFTRVATRVERKLK 190


>gi|323493012|ref|ZP_08098148.1| ABC-type glutamine transport system, permease component [Vibrio
           brasiliensis LMG 20546]
 gi|323312748|gb|EGA65876.1| ABC-type glutamine transport system, permease component [Vibrio
           brasiliensis LMG 20546]
          Length = 246

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 13/235 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               VL          L F         ++ + S VL + L  F   L      K  +A+
Sbjct: 22  WGWYVLDPTTEQGQTNLKFLVAGFSDTIQVSLLSMVLAMTLG-FIVSLPALSPLKPLRAI 80

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +Y+ +     +  L+L      +++  P L   +          F +  IAL+   +A
Sbjct: 81  NRIYVESIRSIPVLVLLL-----WVYYGMPTLLDVSL-------NHFWAGVIALTIAESA 128

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+AE+ R G+ A+ RGQ EAA ALGL + +  RLV+LPQA R I+PPL +Q++ +LK SS
Sbjct: 129 FMAEVFRGGIQAINRGQHEAAEALGLNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSS 188

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L   +G +DL      ++      +EI    +  YL L ++++  +  L  +I +
Sbjct: 189 LVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILIVSQAVRWLEKRIEV 243



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 38/74 (51%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               +    ++ GF +T  ++   M+ A  +G +V    LS  K +  I R+YVE  R+I
Sbjct: 32  EQGQTNLKFLVAGFSDTIQVSLLSMVLAMTLGFIVSLPALSPLKPLRAINRIYVESIRSI 91

Query: 140 PPLVVIFFLYKSVL 153
           P LV++ ++Y  + 
Sbjct: 92  PVLVLLLWVYYGMP 105


>gi|222087817|ref|YP_002546355.1| ABC transporter membrane spanning protein (opine) [Agrobacterium
           radiobacter K84]
 gi|221725265|gb|ACM28421.1| ABC transporter membrane spanning protein (opine) [Agrobacterium
           radiobacter K84]
          Length = 278

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 17/210 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
             FV+ + L       +RH             I T++  G P LV + L Y        L
Sbjct: 30  IGFVVSVPLGFLRASSNRHLSGCVL-------IYTYVFRGTPLLVQLFLIYY------GL 76

Query: 252 GQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           GQ   +  S   P     F    +ALS  +AA+  E+ R+G+ AVPRG +EAA ALGL+ 
Sbjct: 77  GQLEIVRNSMFWPLLREPFWCALLALSLNSAAYTTEVFRAGIQAVPRGVVEAAQALGLSR 136

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               RL++ P A R+++P   ++ + +LK SSLA  V   ++  +   ++++T    EI 
Sbjct: 137 IMQIRLIIFPLAFRTVLPSYANEVIGMLKASSLASTVTLLEITGLARRMVSETFAPYEIF 196

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L    IYL L+ +I+     L   +A   +
Sbjct: 197 LAAGLIYLFLTFVISKLFQMLETHLARSTQ 226


>gi|320160626|ref|YP_004173850.1| amino acid ABC transporter permease protein [Anaerolinea
           thermophila UNI-1]
 gi|319994479|dbj|BAJ63250.1| amino acid ABC transporter permease protein [Anaerolinea
           thermophila UNI-1]
          Length = 291

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 9/228 (3%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLP 233
            +T+ T    FV S V+G++  L     +  F      + +  + +P+L +  F+ F   
Sbjct: 64  HVTITTTLTAFVISLVIGLMAGLGRIARNVFFRNLSTLYVEIVRGIPMLVLIFFIAFVAV 123

Query: 234 TLV---LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             V   L AL   L               ++  P  +   IALS    AF AE+ R+G+ 
Sbjct: 124 PAVTSALNALGRVLVEAGLTWAGGLTQLENSGVPMQIRAIIALSVTYGAFSAEVFRAGIQ 183

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQMEAA + G+T+ +A R V+LPQA+R+++P L + ++++LK+SSL   +   D+ 
Sbjct: 184 SIPKGQMEAARSQGMTYWQAMRYVILPQAIRNVLPALGNDFVSMLKDSSLVSVLAVRDIT 243

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V      QT +  E       +YL ++++++L +  +   ++  + +
Sbjct: 244 QVARLYAGQTFRYPEAFTTLAVLYLIMTLVLSLGVKAIERGLSHGQHR 291



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 81  SDSSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           S  SY  A +    G   T     +  + + +IG + G GR++ N     +  +YVE+ R
Sbjct: 48  SQPSYNQAFVFIQAGIHVTITTTLTAFVISLVIGLMAGLGRIARNVFFRNLSTLYVEIVR 107

Query: 138 NIPPLVVIFFLYKSVL 153
            IP LV+IFF+    +
Sbjct: 108 GIPMLVLIFFIAFVAV 123


>gi|15676686|ref|NP_273830.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis MC58]
 gi|7226020|gb|AAF41201.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis MC58]
          Length = 220

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  FV   ++ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 19  PLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYIS--VIRGTPLLVQLVIVFY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 77  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 126 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 186 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 217


>gi|320355395|ref|YP_004196734.1| PAAT family amino acid ABC transporter membrane protein
           [Desulfobulbus propionicus DSM 2032]
 gi|320123897|gb|ADW19443.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 262

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 114/234 (48%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
                      L F    +    ++ V S  L IV+ L    L R    +    +  LY+
Sbjct: 44  PWMKPDPYLNILRFVPDGILITFEVTVLSITLAIVIGLLTG-LGRLSRNRVINLIASLYV 102

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G+P LV +   Y              +G     P+ ++  IA++    A++ E+
Sbjct: 103 E--VVRGIPLLVQLFYIYY------------ALGRFVRVPDMVAAVIAMAFCYGAYMGEV 148

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++  GQ EAA++LG  HR+    V+LPQA R+I+PP+ ++++ LLK++SL   +
Sbjct: 149 FRAGIKSIDFGQTEAALSLGFNHRQTMAYVILPQAWRTILPPVGNEFIALLKDTSLVSIL 208

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             AD++  G    +++    E   +   IYL ++++++  ++ +  +++  E++
Sbjct: 209 AVADILRRGREYASESFNYFETYTMIALIYLLITLILSKCISIMEHRLSHYERR 262



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 76  IVPYTSDSSYA---TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           ++P+     Y      +  G + TF +    +  A +IG L G GRLS N+++  I  +Y
Sbjct: 42  LLPWMKPDPYLNILRFVPDGILITFEVTVLSITLAIVIGLLTGLGRLSRNRVINLIASLY 101

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           VEV R IP LV +F++Y ++   + +PD    +    F     +
Sbjct: 102 VEVVRGIPLLVQLFYIYYALGRFVRVPDMVAAVIAMAFCYGAYM 145


>gi|296840926|ref|ZP_06863806.2| L-cystine ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
 gi|296839593|gb|EFH23531.1| L-cystine ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
          Length = 227

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  FV   ++ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 26  PLAAASFVIGMIIAVAVALVRIMPAGGIVRKILLKLVEFYIS--VIRGTPLLVQLVIVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E + + +++VP+GQ EA  ++
Sbjct: 84  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETICAAILSVPKGQWEAGFSI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA R  +PPL+++++ L KN+SLA  V   +L  V     N+T   
Sbjct: 133 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDF 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + +    +Y     ++ L   RL  +    
Sbjct: 193 LPVYIEAALVYWCFCKVLFLIQARLEKRFDRY 224


>gi|145295472|ref|YP_001138293.1| hypothetical protein cgR_1405 [Corynebacterium glutamicum R]
 gi|140845392|dbj|BAF54391.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 316

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            +       L    I        +G       L    +         + + S +LG+VL 
Sbjct: 29  WVAAAIIVALLAWFIISALNNEAYGWDTYRAYLFDTRIATAALHTIALTLLSMILGVVLG 88

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
                + R       + +  LY+  F   G P  V +     L   +    LG       
Sbjct: 89  AIL-AVMRMSGNPVMQGVAWLYLWIF--RGTPIYVQLVFWGLLGSLYQSINLGFAEIDLQ 145

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S +S  F+   I L    AA++AEIVRSG+ AVP GQMEA+ ALG+      R  +LPQA
Sbjct: 146 SLLSNMFLLAVIGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMNWSMTMRRTILPQA 205

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  ++ +++LK +SL VA+ ++ +L      I     + + ++L+    YL ++
Sbjct: 206 MRIIIPPTGNELISMLKTTSLVVAIPYSLELYGRSMDIAYSLFEPVPMLLVAASWYLVIT 265

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +    L         +
Sbjct: 266 SILMVGQYYLEKHFEKGSTR 285



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           ++T  L    MI   ++G ++   R+S N ++  +  +Y+ +FR  P  V + F      
Sbjct: 71  LHTIALTLLSMILGVVLGAILAVMRMSGNPVMQGVAWLYLWIFRGTPIYVQLVFWGLLGS 130

Query: 154 SVLPIPDHSIVLPFGMFLNNRGL 176
               I      +     L+N  L
Sbjct: 131 LYQSINLGFAEIDLQSLLSNMFL 153


>gi|157165284|ref|YP_001466153.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Campylobacter concisus 13826]
 gi|112800385|gb|EAT97729.1| L-cystine transport system permease protein TcyB [Campylobacter
           concisus 13826]
          Length = 222

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 112/226 (49%), Gaps = 14/226 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +++  L      +     + + SF LG+V+++  T ++R  + K  K +   Y+  F  
Sbjct: 10  LVSSSTLPMIIALLKVTIPLTLLSFSLGLVIAII-TAIARLSNIKILKFIFATYVWIF-- 66

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +                       + +  IA S    A+ +E VR+ +
Sbjct: 67  RGTPLLVQLFIVFY-----------GLPSLGVTLDTWSAATIAFSLNVGAYASESVRAAI 115

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++VP+GQ EAA +LG+TH +  + ++ PQA+R  +PPL++ ++ L+K++SLA ++   D+
Sbjct: 116 LSVPKGQWEAATSLGMTHYQILKRIIAPQAVRISLPPLSNTFIGLVKDTSLAASITMVDM 175

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             V   I  +T + + + ++   IYL +  ++    +RL   ++  
Sbjct: 176 FMVAQRIAARTFEPLILYILAALIYLVVCTLLTYLQSRLEKAVSRY 221



 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 35/91 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS    I+     T  L         +I  +    RLS  K++ +I   YV +FR  P 
Sbjct: 12  SSSTLPMIIALLKVTIPLTLLSFSLGLVIAIITAIARLSNIKILKFIFATYVWIFRGTPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D          LN
Sbjct: 72  LVQLFIVFYGLPSLGVTLDTWSAATIAFSLN 102


>gi|168187335|ref|ZP_02621970.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           C str. Eklund]
 gi|169294769|gb|EDS76902.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           C str. Eklund]
          Length = 232

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 10/225 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L+   +T+  +    +FS +LG + +L      +    K    +  ++I   ++ G P 
Sbjct: 15  FLNGAGITIVLSLITVIFSSILGTIFALM-----KLSKIKILNIISNVFIE--IVRGTPL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL---YIALSCYTAAFIAEIVRSGLIA 291
           LV + + Y                   +  +F  L    I L+  + A++AEI+RSG+ +
Sbjct: 68  LVQVYIFYYGIPTLLQNAGVELPQIDIMGNDFTGLCMIVITLALNSTAYVAEIIRSGIES 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQMEAA +LGLTH  A R V++PQA+++I+P L ++++ ++K SS+   VG  +L+ 
Sbjct: 128 VNKGQMEAARSLGLTHGMAMRYVIIPQAIKNILPALGNEFITVIKESSIVSIVGIKELMR 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                   T +     L    +Y  L+  ++  +     ++ L +
Sbjct: 188 NAQAASGATLKIFTPYLTAAAMYFILTFTLSKLLGIFERRMKLSD 232


>gi|242311107|ref|ZP_04810124.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           1106b]
 gi|242134346|gb|EES20749.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           1106b]
          Length = 636

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVL-GQFN 255
           L     +R        A    +I  F    L  L+LI      L   +    P     F 
Sbjct: 102 L-----ARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|116254361|ref|YP_770199.1| transmembrane component of transporter [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115259009|emb|CAK10118.1| putative transmembrane component of transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 226

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G+ L L AT + R F      A+   Y+  ++I G P LV + 
Sbjct: 17  WAGLIFTIPLTLLSFAFGLTLGL-ATAIGRLFGPMPLSAVARFYV--WVIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  VIFY-----------GLPSLGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL LS +++    RL  + A  
Sbjct: 183 TYEPLILYIEAALIYLVLSSVLSQLQVRLERRFARY 218



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L          +G     GRL     ++ + R YV V R  P LV +F +
Sbjct: 16  LWAGLIFTIPLTLLSFAFGLTLGLATAIGRLFGPMPLSAVARFYVWVIRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 76  FYGLPSLGILLDAFPAALIGFTLN 99


>gi|257455525|ref|ZP_05620757.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Enhydrobacter aerosaccus SK60]
 gi|257447094|gb|EEV22105.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Enhydrobacter aerosaccus SK60]
          Length = 257

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 9/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+     +      ++ + ++G +L +      R    KT +A+   Y+S F   
Sbjct: 30  YWQWLLTGFKWLLVIGGSGWLIALIIGTILGIM-----RTLPNKTARAIGTAYVSFF--R 82

Query: 231 GLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            +P L+ +   + +   +  P L ++ F      +   +S  I L  +TAA I E VR+G
Sbjct: 83  NIPLLIQLFFWFYVAPTWLTPALQKWWFQELDPNTSAVISASIGLGLFTAARIVEQVRTG 142

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P+GQ  AA ALG T  +  R ++LPQA R I+PP++S+  N  KN+S+A  VG  +
Sbjct: 143 IESLPKGQTNAAYALGFTLPQTYRHIVLPQAFRVILPPMSSELTNCFKNASVASLVGVTE 202

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L+S   TI   T   IE+      IYL  ++++  FM  L  K+ +K
Sbjct: 203 LISQTKTISEYTQNNIEVYTFTTIIYLLFNLVLIYFMTWLEKKLRIK 249



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 36/82 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L GF     +  SG + A IIGT++G  R   NK    I   YV  FRNIP L+ 
Sbjct: 30  YWQWLLTGFKWLLVIGGSGWLIALIIGTILGIMRTLPNKTARAIGTAYVSFFRNIPLLIQ 89

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +FF +    + L          
Sbjct: 90  LFFWFYVAPTWLTPALQKWWFQ 111


>gi|229543204|ref|ZP_04432264.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229327624|gb|EEN93299.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 230

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 119/238 (50%), Gaps = 14/238 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           + P     I       + +  LS     +     + + +F +G+VL   AT L+R    K
Sbjct: 1   MFPNNLAFISSNQLHLVQSSLLSMLKGALHYTIPLTIITFCIGLVL-ALATALARISGIK 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + +  +Y+S   I G P LV + + +   +  P +              F +  I  S
Sbjct: 60  ILEWIARIYVSA--IRGTPLLVQLFIIF---YGLPSVH--------ITIGSFPAAIIGFS 106

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+ +EI+R+ ++++P+GQ EAA ++G+ + +A R ++LPQA+R  +PPL++ +++L
Sbjct: 107 LNVGAYASEIIRAAILSIPKGQWEAAYSIGMNYSQALRRIVLPQAVRVSVPPLSNTFISL 166

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++SLA  +  ADL      I + T Q + + +   F+Y  + +++++   +L  + 
Sbjct: 167 VKDTSLASLILVADLFRKAQEIASTTYQFMLLYVEAAFLYWVICLILSIIQQKLEGRF 224



 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 30/77 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L         ++       R+S  K++ WI R+YV   R  P LV +F ++  + SV
Sbjct: 32  TIPLTIITFCIGLVLALATALARISGIKILEWIARIYVSAIRGTPLLVQLFIIFYGLPSV 91

Query: 156 LPIPDHSIVLPFGMFLN 172
                       G  LN
Sbjct: 92  HITIGSFPAAIIGFSLN 108


>gi|194288894|ref|YP_002004801.1| amino acid ABC transporter [Cupriavidus taiwanensis LMG 19424]
 gi|193222729|emb|CAQ68732.1| putative amino acid ABC transporter, membrane component
           [Cupriavidus taiwanensis LMG 19424]
          Length = 219

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 18/223 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+       VF  +LG V++L         H +  KA+   Y+S  ++ G P L
Sbjct: 15  LQGTLLTIKFALWSMVFGLMLGTVVALMG-----ISHSRVLKAVARGYVS--IMRGTPLL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y               G         +  + LS    A+++E +R  ++ V RG
Sbjct: 68  VQIFVVYY-----------GLPGIGIALEPTPAGVLTLSLNVGAYLSESMRGAILGVARG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA +LGLT  +A R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     
Sbjct: 117 QWLAAYSLGLTPAQALRYVIGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQE 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  T Q + + L    IY  LS  ++   ++L  +++L  + 
Sbjct: 177 VIAATYQPLPLYLAVAAIYWVLSTALSGLQHKLERRLSLPGRH 219



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 34/66 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   ++GT+V    +S ++++  + R YV + R  P LV IF 
Sbjct: 13  VLLQGTLLTIKFALWSMVFGLMLGTVVALMGISHSRVLKAVARGYVSIMRGTPLLVQIFV 72

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 73  VYYGLP 78


>gi|167033586|ref|YP_001668817.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860074|gb|ABY98481.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 321

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F+  +     T  + T   +   S  +  VL+L     +       G A+ +    T   
Sbjct: 108 FIATKVGFMITQGVFTTVYVSTLSIAIAFVLALLG---ATARLSSNGFAIAIASFYTSFF 164

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P L+ I L Y        + Q  ++ G+       +  +ALS    A++ EI R+G+
Sbjct: 165 RGVPLLIQIYLIYL------GIPQLGYVVGAVP-----AGILALSLCYGAYMTEIFRAGI 213

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++PRGQ EA+ A+GLT  +A   V+LPQ+MR IIPP  +Q++++LK+SSL   +G  +L
Sbjct: 214 SSIPRGQWEASRAIGLTPFQAMTRVILPQSMRLIIPPTGNQFISMLKDSSLVSVIGVWEL 273

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +  T      + +E+++    +Y  LSI++    +RL  +     +
Sbjct: 274 MFLARTQGRAEFRHLEMLITAAVLYWVLSILLEAVQSRLEKRFDRAHR 321



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T +++   +  A ++  L    RLS+N     I   Y   FR +P L+ I+ +
Sbjct: 117 ITQGVFTTVYVSTLSIAIAFVLALLGATARLSSNGFAIAIASFYTSFFRGVPLLIQIYLI 176

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 177 YLGIPQL 183


>gi|288904828|ref|YP_003430050.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|306830860|ref|ZP_07464022.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325977757|ref|YP_004287473.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731554|emb|CBI13109.1| Putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
 gi|304426883|gb|EFM29993.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325177685|emb|CBZ47729.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 228

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 119/232 (51%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +T+  +A +  F  ++GI+++L      +  + K    +   
Sbjct: 1   MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALV-----KRTNIKILNWIASF 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+   +  F  +         +   I +S  + A+I
Sbjct: 56  YVWVF--RGTPMVVQIMIAFAWMHFNNAPIVGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+    A R V+LPQA+++I+P L ++++ ++K+SSL 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   +++  T   I  +L   F YL ++ +++  + RL  ++ 
Sbjct: 172 QTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVMSFLVKRLEKRMG 223



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y      G + T  ++   +   TIIG LV   + +  K++ WI   YV VF
Sbjct: 1   MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALVKRTNIKILNWIASFYVWVF 60

Query: 137 RNIPPLVVIFFLYKSV 152
           R  P +V I   +  +
Sbjct: 61  RGTPMVVQIMIAFAWM 76


>gi|190894697|ref|YP_001984990.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700358|gb|ACE94440.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 442

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L       + + SF+           L R    K  +A    YI  F  
Sbjct: 227 FTLWDILRNLLLATRWTILLSLVSFIG-GGAVGLGLLLLRISKNKACRAFAKYYIELF-- 283

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F         P +++  +AL  +TAAF+AEI R  +
Sbjct: 284 QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLAAGMALILWTAAFLAEIWRGCV 332

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQ EA+ +LG+   +  R V+LPQA+R  IPP     + ++K ++L   +GF +L
Sbjct: 333 ESVASGQWEASASLGMGRLQQMRYVILPQALRVAIPPTVGFSVQIIKGTALTSIIGFVEL 392

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 393 SKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 440



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 14/139 (10%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      +        +    ++     VLGI L +F     R       K +   
Sbjct: 1   MSYHFEFGWLLQYYPDIIKGIVITLELIAVGGVLGISLGIF-CAWVRALGPAWLKPVVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  +A+     A+  
Sbjct: 60  YVELIRNTPFLI-------------QLFFIFFGLPSIGLHLSELTAANLAMVVNLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAI 301
           EI+R+G+ A P+GQ EA  
Sbjct: 107 EIIRAGIQATPKGQFEAGR 125



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 46/144 (31%), Gaps = 3/144 (2%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    I    +G  +   R+S NK      + Y+E+F+  P L
Sbjct: 230 WDILRNLLLATRWTILLSLVSFIGGGAVGLGLLLLRISKNKACRAFAKYYIELFQGTPLL 289

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +F  +  +          +     + L               +   V S       SL
Sbjct: 290 MQLFIAFFGLGLFGIDVPAWLAAGMALILWTAAFLAEIWRGCVES---VASGQWEASASL 346

Query: 203 FATRLSRHFHEKTGKALPLLYIST 226
              RL +  +    +AL +    T
Sbjct: 347 GMGRLQQMRYVILPQALRVAIPPT 370


>gi|331670094|ref|ZP_08370939.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA271]
 gi|331063007|gb|EGI34921.1| putative amino-acid ABC transporter permease protein YhdX
           [Escherichia coli TA271]
          Length = 194

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/172 (31%), Positives = 89/172 (51%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 141

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           PL+ IFF Y +VL  LP P  ++      FL+NRGL  P+  +       ++
Sbjct: 142 PLLQIFFWYFAVLRNLPGPRQTVSAFDLAFLSNRGLYIPSPQLGDGFIALLW 193


>gi|16077428|ref|NP_388242.1| cystine ABC transporter permease [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308174|ref|ZP_03590021.1| hypothetical protein Bsubs1_02043 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312496|ref|ZP_03594301.1| hypothetical protein BsubsN3_02029 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221321694|ref|ZP_03602988.1| hypothetical protein BsubsS_02054 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314029|ref|YP_004206316.1| cystine ABC transporter permease [Bacillus subtilis BSn5]
 gi|1175700|sp|P42200|TCYB_BACSU RecName: Full=L-cystine transport system permease protein tcyB
 gi|666982|emb|CAA54725.1| putative membrane spanning subunit [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|1805431|dbj|BAA08993.1| yckJ [Bacillus subtilis]
 gi|2632646|emb|CAB12154.1| cystine ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|291482759|dbj|BAI83834.1| hypothetical protein BSNT_00640 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320020303|gb|ADV95289.1| cystine ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 234

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 15/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +        +  +     + + SF+ G++L+L  T L+R    +  + +  +Y+S  
Sbjct: 17  WDLVQQSFWPILSGGIYYTIPLTILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA- 74

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV + + + L           F   +     F S  IA S    A+ +EI+R+
Sbjct: 75  -IRGTPLLVQLFIIFYL-----------FPAFNVTLDPFPSAVIAFSLNVGAYASEIIRA 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +++VP+GQ EA   +G+TH+K    V+LPQA R  IPPL++ +++L+K++SLA  +  A
Sbjct: 123 SILSVPKGQWEAGYTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVA 182

Query: 348 DLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      I  +   Q + I +   FIY  +  +++L  + +  ++   
Sbjct: 183 ELFRKAQEIGARNLDQILVIYIEAAFIYWIICFLLSLVQHVIERRLDRY 231



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 32/91 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G   T  L     I   I+  +    R+S  + + W+  VYV   R  P 
Sbjct: 21  QQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMSKVRPLRWVFSVYVSAIRGTPL 80

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++    +     D          LN
Sbjct: 81  LVQLFIIFYLFPAFNVTLDPFPSAVIAFSLN 111


>gi|78062381|ref|YP_372289.1| amino acid ABC transporter inner membrane protein [Burkholderia sp.
           383]
 gi|77970266|gb|ABB11645.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Burkholderia sp. 383]
          Length = 619

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 1/255 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ +  +   + S+L  P     +    FL+   LS    T+       V   VLG  ++
Sbjct: 64  VLAVALIAIVLHSILGNPQWGWPVFAEWFLSPPVLSGLARTLVLTLLGAVSGLVLGAFVA 123

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     SR         + L      ++  L    L  L   +    P      F   +T
Sbjct: 124 LARLSRSRLLSASAWTFVWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTDIVWFDTPTT 183

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F++  + L+ + AAF AE++R G++AV +GQ+EAA ALGL   + T  ++LPQAM
Sbjct: 184 DLISPFLAAVLGLTLHHAAFSAEVIRGGILAVDQGQLEAAAALGLPRGRQTTRIVLPQAM 243

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P   +  + L K +S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 244 RAILPTAFNDLIMLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 303

Query: 381 IALFMNRLNAKIALK 395
           ++    ++    A  
Sbjct: 304 LSAIQVQVERHYARG 318



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L   G +   ++G  V   RLS ++L++     +V +FR+IP       + 
Sbjct: 98  LSGLARTLVLTLLGAVSGLVLGAFVALARLSRSRLLSASAWTFVWLFRSIPL------IV 151

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
             ++       +  V     F +      PT  + +     V    L
Sbjct: 152 LLLILNNLGYLYEHVRLGVPFTDIVWFDTPTTDLISPFLAAVLGLTL 198


>gi|313115991|ref|ZP_07801418.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310621755|gb|EFQ05283.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 254

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 115/246 (46%), Gaps = 21/246 (8%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS-LFATRLSRHFHEKTGKA 218
                  +  F+     +     + T   +   +  LGIVL  + A     H  ++ G  
Sbjct: 22  QEFFFKFYQAFILKDRWTQYIKGVSTTLLVTAIALALGIVLGSVVALVRVAHDQQRPGHK 81

Query: 219 LPLLY-------ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
            P+L        I T +I G P +V + +   + F                    M   +
Sbjct: 82  NPVLGFFNIICEIYTTIIRGTPMMVQLLIMSMVIFANSRNFT-------------MVGAL 128

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   + A+++EI+R GL+AV  GQMEA  +LGL +     ++++PQA+R+++P L +++
Sbjct: 129 ALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPALGNEF 188

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + LLK++SL   +G  +L+     I+N+T +A+  +L    IYL L ++    + +   +
Sbjct: 189 IVLLKDTSLITVIGGKELLYAAQGIMNRTYEAMFPLLGVALIYLVLVMLFTRLLAKFERR 248

Query: 392 IALKEK 397
           +A  ++
Sbjct: 249 LAQSDR 254


>gi|157691141|ref|YP_001485603.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|194015977|ref|ZP_03054592.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
 gi|157679899|gb|ABV61043.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
 gi|194012332|gb|EDW21899.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
          Length = 224

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 15/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             + + +    + +  +T+       VF+ ++G+V +L                   LYI
Sbjct: 6   WQYMVTVFPTLIQYLPITIFMAIVSMVFAIIIGVVFALITKN-----RIPVLYQFAKLYI 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F    +PTLV + L Y   F  P L         T      ++ I LS   +A++AEI
Sbjct: 61  SFF--RAVPTLVQLFLIY---FGLPQL-----FPAMTSMDALTAVIIGLSIKNSAYLAEI 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L +V  GQ+EA +++G+T  ++   ++ PQA+R+ IP   + ++ LLK +SLA  +
Sbjct: 111 FRAALNSVDEGQLEACLSVGMTRWQSYVRIIFPQAIRNAIPATGNTFIGLLKETSLAFTI 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G A++ + G  I +   +  E  L    +Y  ++I+ +   +    KI+   +
Sbjct: 171 GVAEMFAQGKMIASANYKYFETYLAVGIVYWVMTIIYSFLQDLFERKISKPYR 223



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 37/89 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +    +    ++     T ++A   M+ A IIG +      +   ++    ++Y+  F
Sbjct: 4   IDWQYMVTVFPTLIQYLPITIFMAIVSMVFAIIIGVVFALITKNRIPVLYQFAKLYISFF 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           R +P LV +F +Y  +  + P       L
Sbjct: 64  RAVPTLVQLFLIYFGLPQLFPAMTSMDAL 92


>gi|187780209|ref|ZP_02996682.1| hypothetical protein CLOSPO_03805 [Clostridium sporogenes ATCC
           15579]
 gi|187773834|gb|EDU37636.1| hypothetical protein CLOSPO_03805 [Clostridium sporogenes ATCC
           15579]
          Length = 222

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 11/227 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    + L+           I + S ++ ++L +    + R +  K    +  +YIS 
Sbjct: 4   FDVKYLVQSLAVLLKYAHITLSIAILSMIIAVLLGVIL-AVIRMYKVKIFHRISEIYISF 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P L+ + L Y   +  P +     I      P +M++ IALS   +A++AEI+R
Sbjct: 63  F--RGTPILIQLFLFY---YGLPQI-----IPSFKEIPAYMAVVIALSMNCSAYMAEIIR 112

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             ++++ +GQMEA+++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG 
Sbjct: 113 GAIMSIDKGQMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGV 172

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+++S        + +  E  L    IY  +  +       L  KI 
Sbjct: 173 AEILSKAQMNAASSYRFFESYLAVALIYWVMVELFNFMQKLLERKIG 219



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A   MI A ++G ++   R+   K+   I  +Y+  FR  P L+ +F  Y  +  +
Sbjct: 23  TLSIAILSMIIAVLLGVILAVIRMYKVKIFHRISEIYISFFRGTPILIQLFLFYYGLPQI 82

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +P           +   +   S     +   A + +
Sbjct: 83  IPSFKEIPAYMAVVIALSMNCSAYMAEIIRGAIMSI 118


>gi|261420863|ref|YP_003254545.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|319768534|ref|YP_004134035.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. Y412MC52]
 gi|261377320|gb|ACX80063.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|317113400|gb|ADU95892.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC52]
          Length = 218

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 115/231 (49%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +      +    +     + +   + G++L LF   L +       +     YI
Sbjct: 1   MDFRFDIIVEYAPYFFQGLLATIGVSLAGIIFGLILGLFIG-LGKMSTNLLVRLPFSWYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F   G P +V I L   +HF    L               +SL ++LS  +AA++AEI
Sbjct: 60  NFF--RGTPLVVQILL---VHFGVMPLF-------FAQPNGIVSLAVSLSLNSAAYVAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP  ++++ L+K+SSL + +
Sbjct: 108 FRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +++  G     +  +  E  L   FIYL L++ ++   + L  K + +
Sbjct: 168 AAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSHYLERKYSTQ 218



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 75/194 (38%), Gaps = 3/194 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA     G + T  ++ +G+I   I+G  +G G++S N LV      Y+  FR  P +V 
Sbjct: 11  YAPYFFQGLLATIGVSLAGIIFGLILGLFIGLGKMSTNLLVRLPFSWYINFFRGTPLVVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  ++  V+ +     + IV        N       +       I          L +  
Sbjct: 71  ILLVHFGVMPLFFAQPNGIVSLAVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTH 130

Query: 205 TRLSRH--FHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGST 261
            +  R+    +   + +P       ++    +L ++IA    +++ K   G++  +    
Sbjct: 131 AQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMVIAAPEIMYWGKAAAGEYYRVWEPY 190

Query: 262 VSPEFMSLYIALSC 275
           ++  F+ L + LS 
Sbjct: 191 LTVAFIYLILTLSL 204


>gi|10954336|gb|AAG24254.1| YckJ [Bacillus subtilis]
          Length = 234

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 15/245 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +                  +        +  +     + + SF+ G++L+L  T L+R  
Sbjct: 1   MFLNNIPALTLGTAIPWDLVQQSFWPILSGGIYYTIPLTILSFIFGMILALI-TALARMS 59

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +  + +  +Y+S   + G P LV + + + L           F   +     F S  I
Sbjct: 60  KVRPLRWVFSVYVSA--VRGTPLLVQLFIIFYL-----------FPAFNITLDPFPSAVI 106

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A S    A+ +EI+R+ +++VP+GQ EA   +G+TH+K    V+LPQA R  IPPL++ +
Sbjct: 107 AFSLNVGAYASEIIRASILSVPKGQWEAGYTIGMTHQKTLFRVILPQAFRVSIPPLSNTF 166

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++L+K++SLA  +  A+L      I  +   Q + I +   FIY  +  +++L  + +  
Sbjct: 167 ISLIKDTSLASQILVAELFRKAQEIGARNLDQILVIYIEAAFIYWIICFLLSLVQHVIER 226

Query: 391 KIALK 395
           ++   
Sbjct: 227 RLDRY 231



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 32/91 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G   T  L     I   I+  +    R+S  + + W+  VYV   R  P 
Sbjct: 21  QQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMSKVRPLRWVFSVYVSAVRGTPL 80

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++    +     D          LN
Sbjct: 81  LVQLFIIFYLFPAFNITLDPFPSAVIAFSLN 111


>gi|315604136|ref|ZP_07879202.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313842|gb|EFU61893.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 320

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/288 (20%), Positives = 117/288 (40%), Gaps = 27/288 (9%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            +   W   V V +   +    +I         V      + ++   +F           
Sbjct: 17  PRPGRWASAVVVTILAAMALHALITNKNFQWPVVAQWLFSASIMQGVLFT---------- 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-- 239
                  + V +  +G  L++    + R       + + + YI  F    + T ++    
Sbjct: 67  -----IILTVLAMFVGTALAI-TMAIMRQSVNPVLRWVAMAYIWFFRGTPIYTQLIFWSL 120

Query: 240 -------LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                  L + + F   + G       +T    F   +I L     A++AEI+R+GL++V
Sbjct: 121 LPTLYPTLSFGVPFLGSLWGWEIPFDTATYFTPFWMAFIGLGLNEGAYLAEIMRAGLLSV 180

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVS 351
           P+GQ EAA ALG+      R ++LPQAMR I+PP+ ++ +++LK +SL  A+ F  +L  
Sbjct: 181 PKGQWEAATALGMPRATIFRRIILPQAMRVIVPPIGNETISMLKTTSLVSAIPFTLELTF 240

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK-EKK 398
           +       T   + +++     YL ++ ++    + +        E++
Sbjct: 241 IARQRGQATFAPVPLLIAAAIWYLVITSLLMWIQSFIEKHFGKGFERR 288



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 3/141 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P  +   ++ +I+ G + T  L    M   T +   +   R S N ++ W+   Y+  FR
Sbjct: 48  PVVAQWLFSASIMQGVLFTIILTVLAMFVGTALAITMAIMRQSVNPVLRWVAMAYIWFFR 107

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             P    + F     L     P  S  +PF   L    + F T T  T   +      L 
Sbjct: 108 GTPIYTQLIFW---SLLPTLYPTLSFGVPFLGSLWGWEIPFDTATYFTPFWMAFIGLGLN 164

Query: 198 IVLSLFATRLSRHFHEKTGKA 218
               L     +       G+ 
Sbjct: 165 EGAYLAEIMRAGLLSVPKGQW 185


>gi|166999442|ref|ZP_02265281.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei
           PRL-20]
 gi|243064504|gb|EES46690.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei
           PRL-20]
          Length = 636

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------GQFN 255
           L     +R        A    +I  F    L  L+LI       +D   L        F 
Sbjct: 102 L-----ARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYDHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|38233733|ref|NP_939500.1| ABC transporter [Corynebacterium diphtheriae NCTC 13129]
 gi|38199994|emb|CAE49663.1| Putative ABC transport system membrane protein [Corynebacterium
           diphtheriae]
          Length = 314

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 4/258 (1%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM--DTNAKIFVFSFVLGIVLS 201
            +  +    L V  +   +    +G  +  + L    +         I + S ++G+VL 
Sbjct: 18  WVAAIIILALFVWFLISAATNDAYGWDIYRQYLFDTRIASAAVHTLAITILSMLMGVVLG 77

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                + R       + +   Y+  F    +   ++        +    LG       + 
Sbjct: 78  CIV-AIMRMSPNPVLRGISWFYLWIFRGTPVYVQLVFWGLLGSIYSGINLGFTEISLENL 136

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +S  F+   + L    AA+++EIVRSG+ AVP GQ EA+ ALG++     R  +LPQAMR
Sbjct: 137 LSNMFILAVVGLGLNEAAYMSEIVRSGIQAVPEGQTEASKALGMSWWMTIRRTVLPQAMR 196

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            I+PP  +++++LLK +SL VA+ +  +L      I       + ++L+    YL ++ +
Sbjct: 197 IIVPPTGNEFISLLKTTSLVVAIPYTSELYGRATDIAAALFDPVPLLLVAATWYLVITSL 256

Query: 381 IALFMNRLNAKIALKEKK 398
           + +  + L         +
Sbjct: 257 LMVAQHYLEKYYDRGATR 274



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 22/119 (18%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           +   ++L +   + ++        +N + G     +            Y  D+  A+A  
Sbjct: 19  VAAIIILALFVWFLIS------AATNDAYGWDIYRQ------------YLFDTRIASAA- 59

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
              V+T  +    M+   ++G +V   R+S N ++  I   Y+ +FR  P  V + F  
Sbjct: 60  ---VHTLAITILSMLMGVVLGCIVAIMRMSPNPVLRGISWFYLWIFRGTPVYVQLVFWG 115


>gi|225620483|ref|YP_002721740.1| amino acid transport system permease [Brachyspira hyodysenteriae
           WA1]
 gi|225215302|gb|ACN84036.1| amino acid transport system permease protein [Brachyspira
           hyodysenteriae WA1]
          Length = 237

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 113/225 (50%), Gaps = 19/225 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-------LLYI 224
               +     ++ T A   V   +LGI+++L    LS  +  K  K L        L + 
Sbjct: 18  YIYVIKGLLFSVGTTACATVIGIILGILVALLQ--LSEFYPFKNSKKLRDFNPLSKLAFW 75

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P +V + +   + F          +     +P  +   IA    + A++AEI
Sbjct: 76  YVNILRGTPVVVQLMIWANVIF----------VDNLRDTPILIIAAIAFGINSGAYVAEI 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ ++ +GQMEAA ALG+ +  + + +++PQA++ I+PPL S+++ LLK +S+   +
Sbjct: 126 IRAGIQSLDKGQMEAARALGMNYSMSMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFI 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           G  DL+     I +QT + +E ++    IY  L+ + A+ M ++ 
Sbjct: 186 GGVDLLRSANIITSQTYRGVEPLIAVGIIYFILTSVFAMIMKKVE 230


>gi|294674316|ref|YP_003574932.1| amino acid ABC transporter ATP-binding protein/permease [Prevotella
           ruminicola 23]
 gi|294473716|gb|ADE83105.1| amino acid ABC transporter, ATP-binding protein/permease protein,
           His/Glu/Gln/Arg/opine family [Prevotella ruminicola 23]
          Length = 911

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 15/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     I + + +LG +L        R    K  + +   YI   L+ G P
Sbjct: 24  NRYQMILDGLQVTLIITLCATILGTLLGGLVC-WMRMNRHKWLRHIASAYID--LMRGTP 80

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVL+ L Y +            +     +   +   +  +  TAA+I+E++R+ +  + 
Sbjct: 81  VLVLLMLMYYV------------LMAPIDATGIVVAIVTFALNTAAYISEMLRTSIQGID 128

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA +ALG T R+    ++LPQ +++++P    + ++LLK +S+   +   D+    
Sbjct: 129 RGQTEAGLALGYTQRQTFIRIILPQVVKAVMPVYQGEVISLLKGTSIVGYIAVNDMTRAS 188

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             I ++T  A   +++   IY  ++ +I   +  L  +   K
Sbjct: 189 DLIRSRTFDAFFPLIVTAIIYFLIAWLIGQLLTALLQRQRTK 230



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL G   T  +     I  T++G LV   R++ +K +  I   Y+++ R  P LV++
Sbjct: 26  YQMILDGLQVTLIITLCATILGTLLGGLVCWMRMNRHKWLRHIASAYIDLMRGTPVLVLL 85

Query: 146 FFLYKSVL 153
             +Y  ++
Sbjct: 86  MLMYYVLM 93


>gi|323358918|ref|YP_004225314.1| amino acid ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323275289|dbj|BAJ75434.1| ABC-type amino acid transport system, permease component
           [Microbacterium testaceum StLB037]
          Length = 221

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 14/227 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              + +         +     + + SF +G+V++LF   L R         +   YIS  
Sbjct: 5   WSLMLDSFWPMVLAGLRGTIPLSLASFAIGLVIALF-MALLRLSRNVVLSGIARFYIS-- 61

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV + + +                       F +  IA S     + AE++R+
Sbjct: 62  IIRGTPLLVQLFVIFY-----------GLPTIGVTIDPFPAAVIAFSLNVGGYAAEVIRA 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +++VPRGQ EAA  +GLT  K    ++LPQA R  +PPL++ +++L+K+SSLA  +  +
Sbjct: 111 AILSVPRGQWEAAHTVGLTPTKTLTRIILPQAARVSVPPLSNTFISLVKDSSLASLILVS 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L      I   + + + + L    IY    ++++   N L  ++  
Sbjct: 171 ELFRQAQNIAAFSYEFMAVYLEAALIYWLFCLVLSFGQNALEKRLDR 217



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +L G   T  L+ +      +I   +   RLS N +++ I R Y+ + R  P L
Sbjct: 10  DSFWPMVLAGLRGTIPLSLASFAIGLVIALFMALLRLSRNVVLSGIARFYISIIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + ++    D          LN
Sbjct: 70  VQLFVIFYGLPTIGVTIDPFPAAVIAFSLN 99


>gi|295109170|emb|CBL23123.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ruminococcus obeum A2-162]
          Length = 261

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 22/254 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFH----------- 212
            FG       L    L +     +F     FVL ++L+L      R F            
Sbjct: 9   NFGKIAPYAQLFRQGLLVTVLLSMFTVAIGFVLALILALMRMSNIRPFRALAVDRNGHLR 68

Query: 213 -----EKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
                    K  PL +I+T  +      P LV I + Y   F    L  F   G    + 
Sbjct: 69  EGGPLVWLSKFNPLSFIATAYVEILRSTPVLVQIFIIYYGVFGMIDLPSFQMFGFIKFN- 127

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F    +AL   + A++ EI+R+G+ ++ +GQ EAA +LGL+     R ++LPQA+++I+
Sbjct: 128 RFFPGVVALGMNSGAYLCEIIRAGIQSIDQGQTEAARSLGLSQTMNLRYIILPQALKNIL 187

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + ++++ ++K S++   +G  D++S    +   T   IE +L+   IY  L    +  
Sbjct: 188 PAIANEFVVIIKESAITYTIGVQDIMSAVNAVKGATFIIIEPLLVATAIYFCLCFPTSKL 247

Query: 385 MNRLNAKIALKEKK 398
           +     +++  +K+
Sbjct: 248 IAYFERRMSHGDKR 261



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 26/106 (24%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-------------------- 123
            YA     G + T  L+   +    ++  ++   R+S  +                    
Sbjct: 15  PYAQLFRQGLLVTVLLSMFTVAIGFVLALILALMRMSNIRPFRALAVDRNGHLREGGPLV 74

Query: 124 ------LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
                  +++I   YVE+ R+ P LV IF +Y  V  ++ +P   +
Sbjct: 75  WLSKFNPLSFIATAYVEILRSTPVLVQIFIIYYGVFGMIDLPSFQM 120


>gi|322420999|ref|YP_004200222.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320127386|gb|ADW14946.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 339

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 114/252 (45%), Gaps = 19/252 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
             +   +     P +++ +   +    + L    +T+     I + S V G++++L    
Sbjct: 107 LNFMDSVKKEQKPRYAVFIEDCLRFLPQLLKGAVMTITLVVCIILISPVGGLLIAL---- 162

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    K    +  L+I  F   G P L+ +   Y   +  P L       G T  P F
Sbjct: 163 -GRISTFKPISGICWLFIWLF--RGTPLLLQLFFIY---YGLPSL-------GVTFKP-F 208

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L    +A++ EI+R G+ ++  GQMEAA A+G+T+ +A R V++PQ  + ++PP
Sbjct: 209 TAAILGLGLNYSAYLGEIIRGGIQSIEHGQMEAAKAIGMTYWQAMRRVIIPQTYKRLMPP 268

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + ++++ L+K+++L   +   +L+     + N       +IL  +   L  + +      
Sbjct: 269 IGNEFIALIKDTALVSTIAMVELMRSADQMFNAYFNVTALILAALIY-LLFTTIFTFIFE 327

Query: 387 RLNAKIALKEKK 398
           ++  +  + E +
Sbjct: 328 KIEIRAGIYENR 339



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 44/90 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G V T  L    ++ + + G L+  GR+S  K ++ IC +++ +FR  P L+
Sbjct: 130 RFLPQLLKGAVMTITLVVCIILISPVGGLLIALGRISTFKPISGICWLFIWLFRGTPLLL 189

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            +FF+Y  + S+            G+ LN 
Sbjct: 190 QLFFIYYGLPSLGVTFKPFTAAILGLGLNY 219


>gi|126457623|ref|YP_001076298.1| polar amino acid ABC transporter ATPase [Burkholderia pseudomallei
           1106a]
 gi|126231391|gb|ABN94804.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           1106a]
          Length = 636

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVL-GQFN 255
           L     +R        A    +I  F    L  L+LI      L   +    P     F 
Sbjct: 102 L-----ARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|118593286|ref|ZP_01550671.1| putative amino-acid transport system permease abc transporter
           protein [Stappia aggregata IAM 12614]
 gi|118434177|gb|EAV40833.1| putative amino-acid transport system permease abc transporter
           protein [Stappia aggregata IAM 12614]
          Length = 226

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF LG+ L L  T ++R F       L   Y+  F   G P LV + 
Sbjct: 17  WAGVKFTIPLTLLSFALGLGLGL-TTAVTRLFAPLPLVLLARGYVWVF--RGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  VIFY-----------GLPSIGILLDAFPAALIGFTLNVGAYSSEIIRAAISSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + G+T R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AFSTGMTWRQAMLRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQSAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL++S ++A    RL  + A  
Sbjct: 183 TYEPLILYIEAALIYLAMSSVLAWLQERLEVRFARY 218



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S  T +  G   T  L          +G      RL A   +  + R YV VFR  P L
Sbjct: 10  DSLPTLLWAGVKFTIPLTLLSFALGLGLGLTTAVTRLFAPLPLVLLARGYVWVFRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S+  + D       G  LN
Sbjct: 70  VQLFVIFYGLPSIGILLDAFPAALIGFTLN 99


>gi|76817435|ref|YP_335895.1| amino acid ABC transporter ATP-binding/permease [Burkholderia
           pseudomallei 1710b]
 gi|254262714|ref|ZP_04953579.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei 1710a]
 gi|254301318|ref|ZP_04968762.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           406e]
 gi|76581908|gb|ABA51382.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei 1710b]
 gi|157811491|gb|EDO88661.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           406e]
 gi|254213716|gb|EET03101.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei 1710a]
          Length = 636

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R    ++    +   + SVL  P     +    FL+   LS    T+   A   +F F 
Sbjct: 36  VRTAGTVLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFA 95

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPV 250
           LG+ L+L     +R        A    +I  F    L  L+LI      L   +    P 
Sbjct: 96  LGVPLAL-----ARVSRSPLLVACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPF 150

Query: 251 L-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F  +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +
Sbjct: 151 TGITFAEVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRAR 210

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++
Sbjct: 211 QATRIVLPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMV 270

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL +  ++++   ++  + A    +
Sbjct: 271 ATVWYLIILTVLSIVQAQVERRYARGAVR 299


>gi|262044227|ref|ZP_06017295.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038418|gb|EEW39621.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 254

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 15/231 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYISTFL--IFGLPTLVL 237
           +T+       +   + G+ L L     + H   K   + L    +  ++    G P  V 
Sbjct: 22  MTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVRFYVSAFRGTPLFVQ 81

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPE------------FMSLYIALSCYTAAFIAEIV 285
           I + +       +  +   +    +               F+S  +A++    A+++EI 
Sbjct: 82  IMVVHFALVPLFINPRDGLLVTGGLMSADFARELRASYGAFLSCIVAITLNAGAYVSEIF 141

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++ +GQMEA+ ALG+   K  R V+L QA R I+PPL +  + ++K+SSLA A+G
Sbjct: 142 RAGIQSIDKGQMEASRALGMPWWKTMRKVILLQAFRRILPPLGNNAIAIVKDSSLASAIG 201

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ADL     T+        E  L    +Y  ++ ++A  +NRL  +    +
Sbjct: 202 LADLAYAARTVSGAYATYWEPYLTISLVYWVITFLLAQLVNRLEKRFGKSD 252



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 10/127 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVE 134
           Y    + G + T       +I  T+ G  +G GR++             LV +  R YV 
Sbjct: 12  YGPLFVDGALMTIKCTIICVILGTLWGLTLGLGRMAKAEHGPWKYILRYLVQFPVRFYVS 71

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR  P  V I  ++ +++ +   P   +++  G+   +             + I   + 
Sbjct: 72  AFRGTPLFVQIMVVHFALVPLFINPRDGLLVTGGLMSADFARELRASYGAFLSCIVAITL 131

Query: 195 VLGIVLS 201
             G  +S
Sbjct: 132 NAGAYVS 138


>gi|53722691|ref|YP_111676.1| ABC transport system, ATP-binding protein [Burkholderia
           pseudomallei K96243]
 gi|52213105|emb|CAH39144.1| putative ABC transport system, ATP-binding protein [Burkholderia
           pseudomallei K96243]
          Length = 636

 Score =  148 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------GQFN 255
           L     +R        A    +I  F    L  L+LI       +D   L        F 
Sbjct: 102 L-----ARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYDHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|53716338|ref|YP_106253.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia mallei ATCC 23344]
 gi|67640783|ref|ZP_00439578.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei GB8
           horse 4]
 gi|121597406|ref|YP_991279.1| His/Glu/Gln/Arg/opine amino acid ABC transporter
           permease/periplasmic amino acid-binding protein
           [Burkholderia mallei SAVP1]
 gi|124382596|ref|YP_001025690.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia mallei NCTC 10229]
 gi|126446129|ref|YP_001077766.1| His/Glu/Gln/Arg/opine amino acid ABC transporter
           permease/periplasmic amino acid-binding protein
           [Burkholderia mallei NCTC 10247]
 gi|254176105|ref|ZP_04882763.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei ATCC
           10399]
 gi|254201135|ref|ZP_04907500.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH]
 gi|254205104|ref|ZP_04911457.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU]
 gi|254359229|ref|ZP_04975501.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei
           2002721280]
 gi|52422308|gb|AAU45878.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia mallei ATCC 23344]
 gi|121225204|gb|ABM48735.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei SAVP1]
 gi|126238983|gb|ABO02095.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei NCTC
           10247]
 gi|147748747|gb|EDK55822.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei FMH]
 gi|147754690|gb|EDK61754.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei JHU]
 gi|148028416|gb|EDK86376.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei
           2002721280]
 gi|160697147|gb|EDP87117.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei ATCC
           10399]
 gi|238521567|gb|EEP85018.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia mallei GB8
           horse 4]
          Length = 636

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------GQFN 255
           L     +R        A    +I  F    L  L+LI       +D   L        F 
Sbjct: 102 L-----ARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYDHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|239986699|ref|ZP_04707363.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 11379]
          Length = 297

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +        L + +  ++  P     +    F     L    +T+          F 
Sbjct: 35  WRWVAIAATAVLLAQFLNGLITNPGWEWDVFAQFFTAPTILKAVWITLQLTFYGTAIGFA 94

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDK 248
           LGIV++    RLS     +T     + Y   +    +P +V +   + L        F  
Sbjct: 95  LGIVVAFM--RLSASGFLRT-----VAYGYIWAFRSIPLIVQLLFWFNLAYLYKELTFGI 147

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F       +     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   
Sbjct: 148 PFGPGFFAFDTMNLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVGSGQLEAAAALGIPKF 207

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      +  + G+ + +++
Sbjct: 208 RQLRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLM 267

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+ ++++  + +    A    +
Sbjct: 268 VATAWYILLTTVLSVLQHYVERHYAKGAVR 297



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 43/143 (30%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  L F G      +G +V   RLSA+  +  +   Y+  FR+IP +V + F 
Sbjct: 74  ILKAVWITLQLTFYGTAIGFALGIVVAFMRLSASGFLRTVAYGYIWAFRSIPLIVQLLFW 133

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +        +       P     +   L            +   ++   IV        S
Sbjct: 134 FNLAYLYKELTFGIPFGPGFFAFDTMNLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVGS 193

Query: 209 RHFHEKTGKALPLLYISTFLIFG 231
                     +P       ++  
Sbjct: 194 GQLEAAAALGIPKFRQLRRIVLP 216


>gi|255994314|ref|ZP_05427449.1| glutamine ABC transporter, permease protein [Eubacterium saphenum
           ATCC 49989]
 gi|255993027|gb|EEU03116.1| glutamine ABC transporter, permease protein [Eubacterium saphenum
           ATCC 49989]
          Length = 224

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 7/215 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V + + GI L  F   L +       + +  +Y+   ++ G P +V   +   
Sbjct: 16  PMTLQVTVMAVIFGIFLGFFI-ALMKMSKNILLRGIAGVYVE--IVRGTPLIVQALIMAY 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F   + + P         +  +AA++AE++R GL +V  GQMEAA +L
Sbjct: 73  GIPTILQAYGSEFKWANLIIP----AVCVCALNSAAYVAEVIRGGLQSVDHGQMEAASSL 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A RL+++PQA + I+P L ++++ L+K +S+    G  +++  G    +     
Sbjct: 129 GMSKFMALRLIIIPQAFKIIMPSLGNEFITLIKETSVLAFCGVPEILRQGELWASSNFNT 188

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E        Y+ L+I ++  +  +  ++   E+K
Sbjct: 189 FEAYTGVALAYMCLTIPLSRIVKLIEKRMKRNERK 223



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T  +    +I    +G  +   ++S N L+  I  VYVE+ R  P +V    
Sbjct: 10  VALKGVPMTLQVTVMAVIFGIFLGFFIALMKMSKNILLRGIAGVYVEIVRGTPLIVQALI 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFL 171
           +   + ++L            +  
Sbjct: 70  MAYGIPTILQAYGSEFKWANLIIP 93


>gi|229019366|ref|ZP_04176190.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1273]
 gi|229025612|ref|ZP_04182019.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1272]
 gi|228735706|gb|EEL86294.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1272]
 gi|228741934|gb|EEL92110.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1273]
          Length = 225

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           I T +  G 
Sbjct: 19  PYILKGLEVTLKIVAASALAGFILGTLLALCKIARIRALNIAA-------DIYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQMIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYSKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYILVIILTLVGKAIEGRMKKSD 225



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +  +  +   I+GTL+   +++  + +     +Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAASALAGFILGTLLALCKIARIRALNIAADIYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQM 87


>gi|323492220|ref|ZP_08097378.1| ABC transporter ATP-binding/permease protein [Vibrio brasiliensis
           LMG 20546]
 gi|323313533|gb|EGA66639.1| ABC transporter ATP-binding/permease protein [Vibrio brasiliensis
           LMG 20546]
          Length = 264

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+ +    G +     L    +T+  +A    F+ ++G+  +       
Sbjct: 33  IGYQWQWYRVPDYILFFEDGEWWPAELLEGLLVTIKISALSLAFTLLIGLTTAAL----- 87

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +      G+ L  +YI   +I   P LV I L Y +             G       F +
Sbjct: 88  KLSDSWVGRGLANIYIE--VIRNTPLLVQIYLLYFIF------------GPVIGLDRFAT 133

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 134 AVLALSLFQGAYTAEVFRGGLNSIPKGQFEAAKSLGLSRFFTFYDVILPQLLQRTLPPLT 193

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL+L++M++     +
Sbjct: 194 NEVVSLIKNSSIVSVMAIFDLTTEGRNIVSETAMPFEIWFTVAAIYLTLTLMLSGLSAWM 253

Query: 389 NAKIALKEK 397
             K+    +
Sbjct: 254 EHKLGASWR 262



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 77  VPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           + +  D  +  A +L G + T  ++   +    +IG    A +LS + +   +  +Y+EV
Sbjct: 46  ILFFEDGEWWPAELLEGLLVTIKISALSLAFTLLIGLTTAALKLSDSWVGRGLANIYIEV 105

Query: 136 FRNIPPLVVIFFLYKSV 152
            RN P LV I+ LY   
Sbjct: 106 IRNTPLLVQIYLLYFIF 122


>gi|326315960|ref|YP_004233632.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323372796|gb|ADX45065.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 220

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L           ++ V +F+L   L L    L +    +        +I
Sbjct: 1   MSNFLQHARDFLPILLQGAVVTVQVTVLAFLLSSALGLIL-ALGKLSPVRAVSLAASTFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I GLP +V +   Y           F           F +  I L    +A+ AE 
Sbjct: 60  N--VIRGLPIIVQLFYIY-----------FVLPDFGVQLTAFQAGVIGLGIAYSAYQAEN 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ AV  GQ EAA+A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +
Sbjct: 107 FRAGIEAVDPGQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             A++   G  I + T Q + +  +   +YL++S+ +   + RL  ++    ++
Sbjct: 167 TVAEMTRAGQLIASSTFQNMTVYTLVALLYLAMSLPLVACLRRLERRLGAGSRR 220


>gi|78061685|ref|YP_371593.1| amino acid ABC transporter inner membrane protein [Burkholderia sp.
           383]
 gi|77969570|gb|ABB10949.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia sp. 383]
          Length = 219

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S  LG+V+ L    + R    +   +L   Y+S  L+ G P
Sbjct: 9   HTLPVMVKGAMLTLKFAVASMALGLVVGLVI-AIMRIGSNRLAASLAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G T+ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDL----------GITLDPT-TAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAAAHSLGLTHVQTLRYVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++     R+  ++AL
Sbjct: 175 QEVIAATFQPLPLYLAAAAIYWVLSTLLTRLQGRVETRLAL 215



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G + T   A + M    ++G ++   R+ +N+L A + + YV + R  P LV +F 
Sbjct: 13  VMVKGAMLTLKFAVASMALGLVVGLVIAIMRIGSNRLAASLAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDLGITLDPTTAGIFTLTLN 97


>gi|328958153|ref|YP_004375539.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4]
 gi|328674477|gb|AEB30523.1| glutamine-binding periplasmic protein [Carnobacterium sp. 17-4]
          Length = 485

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 110/206 (53%), Gaps = 17/206 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
             F  + V G++L LF+   ++           L+ IS+  +  +  + LI L + ++F 
Sbjct: 295 ISFAIALVAGVILGLFSATSNKL----------LIGISSIYVTIMRGIPLIVLAFFVYFS 344

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P   QF  I  S     +++  I LS  T A+I+E+VR G+ AV  GQ+EAA +LGL +
Sbjct: 345 IP---QFLNIQLS----AYVAGIITLSLNTTAYISELVRGGIQAVAVGQLEAARSLGLPY 397

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           + + R ++LPQA++ +IP   +Q++  LK++S+   +G  +L   G  II +T  +  + 
Sbjct: 398 QTSMRKIILPQAIKIMIPSFINQFVITLKDTSILSVIGIVELTQTGKIIIARTYSSGNMW 457

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           LI   +Y+ L  ++    N L  K++
Sbjct: 458 LIIGIMYIILITILTKLSNVLERKMS 483



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
                A + G ++G    ++NKL+  I  +YV + R IP +V+ FF+Y S+   
Sbjct: 295 ISFAIALVAGVILGLFSATSNKLLIGISSIYVTIMRGIPLIVLAFFVYFSIPQF 348


>gi|298346727|ref|YP_003719414.1| amino acid ABC transporter permease [Mobiluncus curtisii ATCC
           43063]
 gi|304389571|ref|ZP_07371533.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315655272|ref|ZP_07908173.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii ATCC 51333]
 gi|315656814|ref|ZP_07909701.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|298236788|gb|ADI67920.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii ATCC 43063]
 gi|304327124|gb|EFL94360.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315490527|gb|EFU80151.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii ATCC 51333]
 gi|315492769|gb|EFU82373.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 307

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 7/210 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LK 241
             + + +  +G+ L++    + R       K +   YI  F    + T ++       L 
Sbjct: 65  LALTIGAMTIGVTLAI-TMAVMRQSPNPVLKGVAWFYIWFFRGTPVYTQLIFWGLLPTLY 123

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             +    P   Q   +    V   F S  + L     A++AEIVR+GL +V  GQ EAA 
Sbjct: 124 PMITLGIPFGPQLFAVETKLVLNMFWSAMLGLGLNEGAYLAEIVRAGLNSVNPGQWEAAT 183

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQT 360
           ALG+      R +++PQAMR I+PP  ++ +++LK +SL   V F  +L      +   T
Sbjct: 184 ALGMKRSMILRRIVIPQAMRVIVPPTGNETISMLKTTSLVSVVPFTLELNFQAQNLGRLT 243

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              + +++     YL ++ ++ +    L  
Sbjct: 244 FMPVPMMICAAIWYLLITSILMVGQYYLEK 273



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 34/113 (30%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L    M     +   +   R S N ++  +   Y+  FR  P    + F 
Sbjct: 57  LIKGIGFTLALTIGAMTIGVTLAITMAVMRQSPNPVLKGVAWFYIWFFRGTPVYTQLIFW 116

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
                    I       P    +  + +     +      +   +++  IV +
Sbjct: 117 GLLPTLYPMITLGIPFGPQLFAVETKLVLNMFWSAMLGLGLNEGAYLAEIVRA 169


>gi|295102408|emb|CBK99953.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Faecalibacterium prausnitzii L2-6]
          Length = 254

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 117/248 (47%), Gaps = 21/248 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS-LFATRLSRHFHEKTG 216
           +        +  F+           + T   +   +  +G++L  + A     H  ++ G
Sbjct: 20  MGQELFYKFYQAFVLKDRWLQYIGGVGTTLLVTAIALAMGVLLGSVVALVRVAHDQQRPG 79

Query: 217 KALPLL-------YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           ++ P+L        + T +I G P +V + +   + F+                   M  
Sbjct: 80  RSNPVLGGFNAVCQVYTTVIRGTPMMVQLLIMSMVIFNNSRNFT-------------MVG 126

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL   + A+++EI+R GL+AV  GQMEA  +LGL +     ++++PQA+R+++P L +
Sbjct: 127 ALALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYITTMVVIIIPQAIRAVLPALGN 186

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ LLK++SL   +G  +L+     I+N+T +A+  +     IYL L ++    + +  
Sbjct: 187 EFIMLLKDTSLITVIGGKELLYAAQGIMNRTYEAMFPLFGVALIYLVLVMIFTWLLAKFE 246

Query: 390 AKIALKEK 397
            ++A  ++
Sbjct: 247 RRLAQSDR 254


>gi|154175001|ref|YP_001409167.1| putative ABC transporter permease protein [Campylobacter curvus
           525.92]
 gi|112802173|gb|EAT99517.1| putative ABC transporter, permease protein [Campylobacter curvus
           525.92]
          Length = 228

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 108/226 (47%), Gaps = 14/226 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            ++   L      +     + + SF  G+V+++  T ++R  + K  K +   Y+  F  
Sbjct: 16  LVSTSTLPMLDALVKVTIPLTLISFACGLVIAII-TAIARLSNFKILKFIFGAYVWIF-- 72

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV + + +           F           + +  IA S    A+ +E VR+ +
Sbjct: 73  RGTPMLVQLFIIF-----------FGLPAVGVTLDTWSAAIIAFSLNVGAYASESVRASI 121

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++VP+GQ EAA +LG++H +    ++ PQA+R  +PPL++ ++ L+K++SLA ++   D+
Sbjct: 122 LSVPKGQWEAATSLGMSHAQILHRIIAPQAVRISLPPLSNTFIGLVKDTSLAASITMVDM 181

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             V   I  +T + + + ++   IYL +  ++     +L    +  
Sbjct: 182 FMVAQRIAARTFEPLVLYVLAALIYLVVCTLLTFLQAKLEKYTSRY 227



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L         +I  +    RLS  K++ +I   YV +FR  P LV +F ++  + +V
Sbjct: 32  TIPLTLISFACGLVIAIITAIARLSNFKILKFIFGAYVWIFRGTPMLVQLFIIFFGLPAV 91

Query: 156 LPIPDHSIVLPFGMFLN 172
               D          LN
Sbjct: 92  GVTLDTWSAAIIAFSLN 108


>gi|51243940|ref|YP_063824.1| glutamine transport system permease protein (GlnP) [Desulfotalea
           psychrophila LSv54]
 gi|50874977|emb|CAG34817.1| related to glutamine transport system permease protein (GlnP)
           [Desulfotalea psychrophila LSv54]
          Length = 269

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 19/241 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
                 IPD       G F     L    +T+  +    V +F +G+  +L      R  
Sbjct: 45  YWQWYQIPDFIGSFTGGSFKAGPLLKGLKITLQISGISLVCAFFIGLTTALL-----RLS 99

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             + G  L + Y+   +    P L+ I   Y +             G       F S  +
Sbjct: 100 SSRVGHGLAVFYLE--ISRNTPLLIQIFFIYFVF------------GPILGLERFSSAIL 145

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS +  A+ +EI R+G++++ RGQ EAA + GL++ +  R ++LPQA++ I+PPLT+Q 
Sbjct: 146 ALSLFEGAYTSEIFRTGILSIDRGQHEAAASFGLSNIQRYRFIILPQAIKKILPPLTNQA 205

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L+K+S+L   +   DL      ++ +T  + EI      IYL ++I++++ +  ++ K
Sbjct: 206 ISLVKDSALVSTIAIYDLTMQAQMLVAETYLSFEIWFTVALIYLCINILLSIAVFLMDKK 265

Query: 392 I 392
            
Sbjct: 266 F 266



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 41/83 (49%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           ++I   I  +T  S  A  +L G   T  ++   ++ A  IG      RLS++++   + 
Sbjct: 49  YQIPDFIGSFTGGSFKAGPLLKGLKITLQISGISLVCAFFIGLTTALLRLSSSRVGHGLA 108

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
             Y+E+ RN P L+ IFF+Y   
Sbjct: 109 VFYLEISRNTPLLIQIFFIYFVF 131


>gi|259909459|ref|YP_002649815.1| Putative amino-acid transport system permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|224965081|emb|CAX56613.1| Putative amino-acid transport system permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|283479532|emb|CAY75448.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 227

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + +F LG+ L      L R +  +  ++L   Y+  +LI G P 
Sbjct: 12  FWPMLYAGLTFTIPLTLIAFTLGLSLGAVV-ALVRLYGPRPLQSLVRFYV--WLIRGTPL 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +               G       F +  I  +    A+ +EI+R+ L++VP+
Sbjct: 69  LVQLFLIFY-----------ALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G++  +  R +++PQA R  +PPL++ ++ L+K++SLA  +   +L     
Sbjct: 118 GQWEAAHSIGMSWGQTLRRIVMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I   T Q + +      IYL LS +++    RL  K+A
Sbjct: 178 RIAAVTYQPLILYTEAAIIYLLLSSVLSALQARLEKKLA 216



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G   T  L          +G +V   RL   + +  + R YV + R  P L
Sbjct: 10  ESFWPMLYAGLTFTIPLTLIAFTLGLSLGAVVALVRLYGPRPLQSLVRFYVWLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++ ++  V    D       G  LN
Sbjct: 70  VQLFLIFYALPGVGITIDAFPAAVIGFTLN 99


>gi|160937964|ref|ZP_02085322.1| hypothetical protein CLOBOL_02858 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439190|gb|EDP16944.1| hypothetical protein CLOBOL_02858 [Clostridium bolteae ATCC
           BAA-613]
          Length = 267

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 94/243 (38%), Gaps = 17/243 (6%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
           +P      V+          L    +++       +   ++G  + +  T  S       
Sbjct: 1   MPTDFFGRVMVVFNRYGMSMLQGAGVSLKIALVGTLVGCIIGFAVGIVQTIPSERGDNPV 60

Query: 216 GKALPLLYISTFL------IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            +A+ L  +   L        G P +      Y      P+L              + + 
Sbjct: 61  KRAV-LWAVKLILNAYVEFFRGTPMMAQAMFIYYG--LLPML--------GINMSMWGAA 109

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           Y  LS  T A++AE VR G++++  GQ E A A+G+TH +    V+LPQA+R+I+P + +
Sbjct: 110 YFILSINTGAYMAETVRGGILSIDPGQTEGAKAIGMTHVQTMLYVILPQALRNIMPQIGN 169

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +  +K+S +   +G  +L+              E   I M IY  ++   +  +    
Sbjct: 170 NLIINIKDSCVLSVIGVTELLYKTKAAAGALYMNFEAYTITMIIYFIMTFTCSRILRWWE 229

Query: 390 AKI 392
            ++
Sbjct: 230 NRM 232



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 12/118 (10%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICRV 131
            Y  ++L G   +  +A  G +   IIG  VG  +   +              V  I   
Sbjct: 15  RYGMSMLQGAGVSLKIALVGTLVGCIIGFAVGIVQTIPSERGDNPVKRAVLWAVKLILNA 74

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           YVE FR  P +    F+Y  +L +L I        + +   N G             I
Sbjct: 75  YVEFFRGTPMMAQAMFIYYGLLPMLGINMSMWGAAYFILSINTGAYMAETVRGGILSI 132


>gi|167836762|ref|ZP_02463645.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 219

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 101/225 (44%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L           K  V S + G+V ++    L      +    L   Y+S  ++ G P
Sbjct: 9   QSLPVLLQGALLTVKFAVLSMLFGLVGAVVL-ALMGIGGNRALAGLARAYVS--VMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + 
Sbjct: 66  LLVQIFVVY---YGLPSL-------GVSLDPT-PAGVIALSANVAAYMSESMRGAINGID 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ  AA +LGL+ R+    V+ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 115 KGQWLAAYSLGLSWRQTLHYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSA 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             II  T Q + + L    +Y  L  ++         ++ L  + 
Sbjct: 175 QEIIASTYQPLPLYLAAAGVYWVLCQILEWVQRWYEQRLTLPSRH 219



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   +   ++    +  N+ +A + R YV V R  P LV IF 
Sbjct: 13  VLLQGALLTVKFAVLSMLFGLVGAVVLALMGIGGNRALAGLARAYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 73  VYYGLPSL 80


>gi|254473824|ref|ZP_05087219.1| ABC-type glutamine transport system, permease component
           [Pseudovibrio sp. JE062]
 gi|211957210|gb|EEA92415.1| ABC-type glutamine transport system, permease component
           [Pseudovibrio sp. JE062]
          Length = 248

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 13/237 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               V+          L F    +     + + +  + +++ LF   L      K G A 
Sbjct: 24  WGWYVVSPETETGRVNLGFMIAGLQETISVSLTAIAISMLVGLFV-ALPGLSDNKFGLAF 82

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              Y+   ++  +P+LVLI   + +++  PV+   +          F +  +AL+   +A
Sbjct: 83  NRTYVE--VVRSVPSLVLI---FWVYYGLPVVANISI-------NVFWAGVLALALSDSA 130

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F AEI R+G+ +V +GQ+EA  +LGL++ +  R ++LPQA+R ++PPL +Q + +LK SS
Sbjct: 131 FQAEIFRAGIQSVDKGQIEAGHSLGLSYFQRLRFIILPQAIRRMLPPLGNQLVYMLKMSS 190

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L   +G  DL      ++    + +EI  + +  YL L ++++  +  L  +   + 
Sbjct: 191 LVSVIGLQDLTRRANELVVTEYRPLEIYTVLVLEYLVLILIVSQGVRWLERRFKAER 247



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++ + +  + ++G  V    LS NK      R YVEV R++P LV+IF++
Sbjct: 43  MIAGLQETISVSLTAIAISMLVGLFVALPGLSDNKFGLAFNRTYVEVVRSVPSLVLIFWV 102

Query: 149 YKSVL 153
           Y  + 
Sbjct: 103 YYGLP 107


>gi|296158006|ref|ZP_06840839.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891774|gb|EFG71559.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 222

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 13/218 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                       ++   S  L  VL L             G+  P       +++G  T 
Sbjct: 12  WPDIMRGTLVTVEVTAASLALSCVLGLLIG---------IGRLTPKRR----MVYGFCTA 58

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L   +      +  L  F       + P F+   + L  Y+AA+++EIVR  + +V RG
Sbjct: 59  YLTFFRGTPLLVQLFLLFFGLPQFGILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G++  +A R ++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  
Sbjct: 119 QMEAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQK 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+ + +++E+ L    +YL L+      ++R+  ++ 
Sbjct: 179 IISVSYRSLEVYLAIALVYLVLTQATNYALHRVERRLR 216


>gi|323142442|ref|ZP_08077263.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT
           12067]
 gi|322413087|gb|EFY03985.1| ABC transporter, permease protein [Phascolarctobacterium sp. YIT
           12067]
          Length = 214

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 19/233 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +  + +    ++        V S  LGI+LSL      R    K  +AL   Y+
Sbjct: 1   MDYVLNIIPQMMDGCLVSFQVFIITIVLSIPLGILLSL-----GRVSGIKPLQALIGGYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P ++ I   Y           F         P+F S  +A     AA+  EI
Sbjct: 56  --WILRGSPLMLQIFFVY-----------FVLPSVGIRLPDFESAIVAFVLNYAAYFCEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ A+P GQ EAA  LG+ + +  R ++LPQ +R I+PP++++ + L+K++SL   +
Sbjct: 103 FRAGIQAIPAGQYEAAHTLGMNYVQTMRRIILPQVIRIILPPISNETITLVKDTSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              DL+     ++ +   +I   ++    YL  ++++ L   RL  + +  ++
Sbjct: 163 AMNDLMRTARNLVQRDF-SITPFIVAAVFYLLATLILTLVFERLEKRFSRYDQ 214



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + +F +    ++ +  +G L+  GR+S  K +  +   YV + R  P ++ IFF+
Sbjct: 11  MMDGCLVSFQVFIITIVLSIPLGILLSLGRVSGIKPLQALIGGYVWILRGSPLMLQIFFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV               LN              A 
Sbjct: 71  YFVLPSVGIRLPDFESAIVAFVLNYAAYFCEIFRAGIQAI 110


>gi|157369068|ref|YP_001477057.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320832|gb|ABV39929.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 254

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 1/192 (0%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
                +    +  PL      + F L  L  I  +  L     ++         +    F
Sbjct: 63  WPVRIYISAFRGTPLFVQIMVVHFALVPL-FINPRDGLLVTNGLMSSDFARALRSDYGAF 121

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  +A++    A+++EI R+G+ ++ RGQMEA+ +LG+ + K  R V+LPQA R ++PP
Sbjct: 122 LSCVVAITLNAGAYVSEIFRAGIQSIDRGQMEASRSLGMGYGKTMRKVILPQAFRRMLPP 181

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + ++K+SSLA A+G ADL     T+        E  L    +Y  L+ +++L + 
Sbjct: 182 LGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISLVYWVLTFLLSLMVQ 241

Query: 387 RLNAKIALKEKK 398
            +  +    + +
Sbjct: 242 HMEKRFGKSDSR 253


>gi|86359584|ref|YP_471476.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86283686|gb|ABC92749.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 219

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G++L L  T ++R F      A+   Y+  ++I G P LV + 
Sbjct: 10  WAGLIFTIPLTLLSFTFGLILGLI-TAIARLFSPAPVAAIARFYV--WVIRGTPLLVQLF 66

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 67  VIFY-----------GLPSVGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 115

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 116 AYSIGMSWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 175

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL LS +++    RL  + A  
Sbjct: 176 TYEPLILYIEAALIYLVLSSILSQLQVRLERRFARY 211



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 35/84 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L         I+G +    RL +   VA I R YV V R  P LV +F +
Sbjct: 9   LWAGLIFTIPLTLLSFTFGLILGLITAIARLFSPAPVAAIARFYVWVIRGTPLLVQLFVI 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + SV  + D       G  LN
Sbjct: 69  FYGLPSVGILLDAFPAALIGFTLN 92


>gi|296332721|ref|ZP_06875181.1| cystine ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673066|ref|YP_003864738.1| cystine ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150001|gb|EFG90890.1| cystine ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411310|gb|ADM36429.1| cystine ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 234

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 15/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +        +  +     + + SF+ G++L+L  T L+R    +  + +  +Y+S  
Sbjct: 17  WDLVQQSFWPILSGGIYYTIPLTILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA- 74

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV + + + L           F   +     F S  IA S    A+ +EI+R+
Sbjct: 75  -IRGTPLLVQLFIIFYL-----------FPAFNITLDPFPSAVIAFSLNVGAYASEIIRA 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +++VP+GQ EA   +G+TH+K    V+LPQA R  IPPL++ +++L+K++SLA  +  A
Sbjct: 123 SILSVPKGQWEAGYTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVA 182

Query: 348 DLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      I  +   Q + I +   FIY  +  +++L  + +  ++   
Sbjct: 183 ELFRKAQEIGARNLDQILVIYIEAAFIYWMICFLLSLVQHVIERRLDRY 231



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 75  GIVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             +P+     S+   +  G   T  L     I   I+  +    R+S  + + W+  VYV
Sbjct: 13  TAIPWDLVQQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMSKVRPLRWVFSVYV 72

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
              R  P LV +F ++    +     D          LN
Sbjct: 73  SAIRGTPLLVQLFIIFYLFPAFNITLDPFPSAVIAFSLN 111


>gi|110598078|ref|ZP_01386357.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM
           13031]
 gi|110340337|gb|EAT58831.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Chlorobium ferrooxidans DSM
           13031]
          Length = 476

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 106/220 (48%), Gaps = 18/220 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L   ++T+       + + +LGI L++      +       +AL  +YI  F   G P L
Sbjct: 264 LKAASVTVLLAFGAMIIAVILGIPLAV-----GQSNGGPLTRALCTVYIEFF--RGTPVL 316

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +     L+F  PV+            P +++  + L    AA+ +++ R+   A+P  
Sbjct: 317 VQLLF---LYFGLPVI--------GITLPGWLTAIVGLGLNYAAYESQVYRTAFQAIPER 365

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q + A +LG+    A R ++ PQA R  +PP+T+ ++ L K++S A A+   +L +    
Sbjct: 366 QWQVAYSLGMHPLLAFRRIIFPQAFRIALPPMTNDFVALFKDTSTAFAIAVWELATAYRE 425

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + N T   + I L+    YL++S+ +A + ++L  K+  K
Sbjct: 426 LANATQSYLGIGLVVCCYYLAMSLPLAHYAHKLEQKLQRK 465



 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 40/100 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  LAF  MI A I+G  +  G+ +   L   +C VY+E FR  P LV + FL
Sbjct: 263 LLKAASVTVLLAFGAMIIAVILGIPLAVGQSNGGPLTRALCTVYIEFFRGTPVLVQLLFL 322

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +  +       +    G+ LN              A 
Sbjct: 323 YFGLPVIGITLPGWLTAIVGLGLNYAAYESQVYRTAFQAI 362


>gi|169631316|ref|YP_001704965.1| amino acid ABC transporter permease [Mycobacterium abscessus ATCC
           19977]
 gi|169243283|emb|CAM64311.1| Putative amino acid ABC transporter, permease protein
           [Mycobacterium abscessus]
          Length = 293

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 14/263 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V + F+   V  ++  P          F     L+   LT+       V  F+LG+ L+ 
Sbjct: 38  VALVFVAMFVHGLVRNPGWDWPTFARYFTAKSVLAALWLTLRLTFYGTVLGFLLGVALA- 96

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-------HFDKPVLGQFN 255
                +R       +A+   Y+  F    +P +V +   + +        F  P      
Sbjct: 97  ----AARLSKNPVLQAISWTYVWIF--RSIPLIVQLLFWFNIAYLYDTIGFGIPFGPALF 150

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +     +  I L+ +  A+ AEI+R G+++V  GQ+EAA ALG+  R+    ++
Sbjct: 151 TVDTNELLSGLTAAVIGLTLHQGAYFAEIIRGGILSVDEGQLEAAAALGIPRRRQFFRIV 210

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMRS++P   ++ ++L+K +S+   +  ADL      I  + G+ + ++++    Y+
Sbjct: 211 LPQAMRSVMPNAANEVISLVKGTSIVSTMAIADLFYQVQVIFGRNGRVVPLLMVATAWYI 270

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++ +    +    A    +
Sbjct: 271 VITSVLTVVQYYIERHYARGAHR 293



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A ++L     T  L F G +   ++G  + A RLS N ++  I   YV +FR+IP +V +
Sbjct: 67  AKSVLAALWLTLRLTFYGTVLGFLLGVALAAARLSKNPVLQAISWTYVWIFRSIPLIVQL 126

Query: 146 FFLYKSVL 153
            F +    
Sbjct: 127 LFWFNIAY 134


>gi|301630238|ref|XP_002944229.1| PREDICTED: glutamine transport ATP-binding protein glnQ-like
           [Xenopus (Silurana) tropicalis]
          Length = 444

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +L   +      L     T+  +A  F+   + G+ L+L   R  R     TG       
Sbjct: 1   MLGISIDQIGFILKGAGWTLVLSALGFIGGALTGLPLALARARGGRWLRVLTGA------ 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               L+ G+P  V++ L Y           F         P  ++  +A++ Y++A++ E
Sbjct: 55  -YVQLVQGIPLPVIMFLAY-----------FGISIAGFDLPSLVAAGLAMTAYSSAYLGE 102

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I +  + AVP+ Q EAA  L LT  +    V+LPQA R  + P     + ++KNSS AV 
Sbjct: 103 IWKGCIQAVPKTQWEAAACLALTPWQRAVHVVLPQAARIAVAPTVGFLVQIVKNSSYAVV 162

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +GF DL      + N T     +  +   +Y ++   ++    RL  ++  K
Sbjct: 163 IGFFDLTYSARVVNNSTFAPFVVFSLAAVLYFAICYPLSTLSYRLEKRLVRK 214



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L+  G I   + G  +   R    + +  +   YV++ + IP  V++F  
Sbjct: 12  ILKGAGWTLVLSALGFIGGALTGLPLALARARGGRWLRVLTGAYVQLVQGIPLPVIMFLA 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +          +     M   +             A
Sbjct: 72  YFGISIAGFDLPSLVAAGLAMTAYSSAYLGEIWKGCIQA 110


>gi|225174438|ref|ZP_03728437.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
 gi|225170223|gb|EEG79018.1| polar amino acid ABC transporter, inner membrane subunit
           [Dethiobacter alkaliphilus AHT 1]
          Length = 219

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 102/219 (46%), Gaps = 17/219 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+          FVLGI+  L      R    K   AL   Y+   +I G P L
Sbjct: 18  LQGMWMTIMITVGGVALGFVLGILFGL-----GRISKNKIIFALSTTYVE--IIRGTPIL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I   Y   F  P+L        +                  A++AEIVR G+ ++ +G
Sbjct: 71  VQIFFIY---FAMPILLGSRISNITAAIAAIAINS-------GAYLAEIVRGGIQSIDKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA   +G+T  +  R ++ PQA + IIPP+ +Q++  LK++SL   +  ADL   G T
Sbjct: 121 QTEAGRTIGMTPFQTMRYIIWPQAFKRIIPPMGNQFIISLKDTSLLSVIAVADLTRRGQT 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           II    +++EI      +YL++++ I+  + R+  ++ +
Sbjct: 181 IIAVNYRSVEIWGTVALLYLTMTLTISFVLRRMERRLDV 219



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +   G+    ++G L G GR+S NK++  +   YVE+ R  P LV IFF
Sbjct: 16  ALLQGMWMTIMITVGGVALGFVLGILFGLGRISKNKIIFALSTTYVEIIRGTPILVQIFF 75

Query: 148 LYKSVL 153
           +Y ++ 
Sbjct: 76  IYFAMP 81


>gi|91783310|ref|YP_558516.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91687264|gb|ABE30464.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 219

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 18/212 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +F  + G VL+L         H +    +  +Y+S  ++ G P LV I + Y    
Sbjct: 26  VLSMIFGLIAGAVLALMG-----VSHSRALNWIARIYVS--VMRGTPLLVQIFVIYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IALS   AA+++E +R  ++ + +GQ  AA +LGL+
Sbjct: 76  --------GLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIHQGQWLAAYSLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     II  T Q + +
Sbjct: 128 RRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEIIASTYQPLPL 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +Y  L  M+         ++AL  + 
Sbjct: 188 YLAAAAVYWVLCQMLESVQRWYERRLALPSRH 219



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 33/70 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A   MI   I G ++    +S ++ + WI R+YV V R  P LV IF 
Sbjct: 13  VLAQGAVLTIKFAVLSMIFGLIAGAVLALMGVSHSRALNWIARIYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  + S   
Sbjct: 73  IYYGLPSFGI 82


>gi|237510507|ref|ZP_04523222.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei MSHR346]
 gi|235002712|gb|EEP52136.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei MSHR346]
          Length = 636

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVL-GQFN 255
           L     +R        A    +I  F    L  L+LI      L   +    P     F 
Sbjct: 102 L-----ARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATADLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|218235175|ref|YP_002365195.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus B4264]
 gi|218163132|gb|ACK63124.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus B4264]
          Length = 230

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VLG ++ L      R  + K   ++  +YI   +I G P +V IA+ Y  
Sbjct: 18  VTLQLTLTSLVLGSLIGLL-FAFFRISNNKFLNSIAHVYI--AIIRGTPLIVQIAILY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V   F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG
Sbjct: 73  ----------FGITSVVVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G +I     Q +
Sbjct: 123 MPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I    YL L ++   F+N L  ++  KE
Sbjct: 183 DTYIIVGAYYLVLVLLFTYFVNLLENRLQRKE 214



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 37/88 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK +  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKFLNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|116250760|ref|YP_766598.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255408|emb|CAK06483.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 290

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 8/256 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + I  L    L V               ++   L    LT++  A   +F  VLG +L+L
Sbjct: 31  IAISALAFFSLVVGQSQSIQWSEIPRYLVDPSILRGVLLTLELTAGAMMFGIVLGCLLAL 90

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGST 261
            A            K +   ++  F   G+P +V I   + +    P +G  +F I  + 
Sbjct: 91  MA-----TSQNPVLKVIAAGFVWWF--RGVPLIVQIFFWFNIALFIPQVGMGSFTISIND 143

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +    ++ ++AL  + AA ++EI+R GLIAV RGQ EAA ALGL   +    V++PQA R
Sbjct: 144 LVTPALAGFLALGLHEAANMSEIIRGGLIAVDRGQREAATALGLKKTQTFFTVIMPQATR 203

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP  +Q + +LK S++   +G  DL++    I  +    IE++ +    YL+++ + 
Sbjct: 204 IIVPPTGNQAIGMLKASAIVSVIGMQDLLTQAQAIYARNFLVIELLFVASIWYLAITSVA 263

Query: 382 ALFMNRLNAKIALKEK 397
           ++  + L   +  K +
Sbjct: 264 SIGQHYLEKSLVPKGR 279



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L    M+   ++G L+     S N ++  I   +V  FR +P +V IFF 
Sbjct: 63  ILRGVLLTLELTAGAMMFGIVLGCLLALMATSQNPVLKVIAAGFVWWFRGVPLIVQIFFW 122

Query: 149 YKSVL 153
           +   L
Sbjct: 123 FNIAL 127


>gi|224371141|ref|YP_002605305.1| ABC-type amino acid transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223693858|gb|ACN17141.1| ABC-type amino acid transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 229

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 19/245 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    IP +   +    F+    +    +T+  +    + S + G+V +L   RLS
Sbjct: 1   MNYHWQWYRIPQYLGAMGDTGFIPGPLIQGLGVTIKISVAALLLSSLFGLVAALA--RLS 58

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
             F  +      L  I   LI   P LV +   Y +            +  +     F +
Sbjct: 59  NLFSLRV-----LARIYLELIRNTPLLVQLFFIYFV------------VSPTLNISRFAA 101

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ +  A+ +EI+R+G+I++P+GQ EAAI+LGL+     R V+LPQA+R ++PPLT
Sbjct: 102 AVLTLALFEGAYASEIIRAGIISIPQGQWEAAISLGLSRHHTFRHVILPQAIRIMLPPLT 161

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           SQ ++L+K+S+L   +   D+   G  I+ +T    EI L    IYL ++  ++L    +
Sbjct: 162 SQMVSLVKDSALVSTIAVYDITMRGQEIMAETYLVFEIWLTIALIYLGITYTLSLVTRFM 221

Query: 389 NAKIA 393
             K++
Sbjct: 222 EKKLS 226



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 40/83 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I Q +            ++ G   T  ++ + ++ +++ G +    RLS    +  + 
Sbjct: 8   YRIPQYLGAMGDTGFIPGPLIQGLGVTIKISVAALLLSSLFGLVAALARLSNLFSLRVLA 67

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
           R+Y+E+ RN P LV +FF+Y  V
Sbjct: 68  RIYLELIRNTPLLVQLFFIYFVV 90


>gi|319763454|ref|YP_004127391.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330824299|ref|YP_004387602.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317118015|gb|ADV00504.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329309671|gb|AEB84086.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 222

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 13/221 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
             G            ++   S +LG V+ L       +   +    L   Y++      L
Sbjct: 9   WAGWLQLLQGAVVTVQVTAASLLLGCVMGLLVGIGRLNPRNRIVYGLCTAYVAAIRGTPL 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
              + +                       + P F+   I L  Y+ A+++EIVR  + ++
Sbjct: 69  LVQLFLLFFGLPQLG-------------VLLPAFVCGVIGLGIYSGAYVSEIVRGAIQSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA ++GL+  +A R V+LPQA+  +IPPL ++++ L+KNS+L   +   DL+  
Sbjct: 116 DKGQMEAARSIGLSSGQAMRSVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHE 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  II+ + +++E+ L    +Y  L+    L +  +  ++ 
Sbjct: 176 GQKIISVSYRSLEVYLAIAVVYFVLTGATTLVLRHMELRLR 216



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-ANKLVAWICRVYVEV 135
           + ++   +    +L G V T  +  + ++   ++G LVG GRL+  N++V  +C  YV  
Sbjct: 3   LDFSPVWAGWLQLLQGAVVTVQVTAASLLLGCVMGLLVGIGRLNPRNRIVYGLCTAYVAA 62

Query: 136 FRNI 139
            R  
Sbjct: 63  IRGT 66


>gi|239940211|ref|ZP_04692148.1| putative ABC transporter permease protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291443641|ref|ZP_06583031.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998]
 gi|291346588|gb|EFE73492.1| ABC amino acid transporter [Streptomyces roseosporus NRRL 15998]
          Length = 297

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 114/270 (42%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +        L + +  ++  P     +    F     L    +T+          F 
Sbjct: 35  WRWVAIAATAVLLAQFLNGLITNPGWEWDVFAQFFTAPTILKAVWITLQLTFYGTAIGFA 94

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDK 248
           LGIV++       R       + +   YI  F    +P +V +   + L        F  
Sbjct: 95  LGIVVAFM-----RLSASGFLRTVAYGYIWAF--RSIPLIVQLLFWFNLAYLYKELTFGI 147

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F       +     +  + L+ + AA+ AEIVR G++AV  GQ+EAA ALG+   
Sbjct: 148 PFGPGFFAFDTMNLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVGSGQLEAAAALGIPKF 207

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      +  + G+ + +++
Sbjct: 208 RQLRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLM 267

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+ ++++  + +    A    +
Sbjct: 268 VATAWYILLTTVLSVLQHYVERHYAKGAVR 297



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 43/143 (30%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  L F G      +G +V   RLSA+  +  +   Y+  FR+IP +V + F 
Sbjct: 74  ILKAVWITLQLTFYGTAIGFALGIVVAFMRLSASGFLRTVAYGYIWAFRSIPLIVQLLFW 133

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +        +       P     +   L            +   ++   IV        S
Sbjct: 134 FNLAYLYKELTFGIPFGPGFFAFDTMNLVGAMSAAVLGLALHQAAYAAEIVRGGVLAVGS 193

Query: 209 RHFHEKTGKALPLLYISTFLIFG 231
                     +P       ++  
Sbjct: 194 GQLEAAAALGIPKFRQLRRIVLP 216


>gi|229104758|ref|ZP_04235419.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-28]
 gi|228678631|gb|EEL32847.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-28]
          Length = 225

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 19  PYILKGLEVTLKIVAVSALVGFILGTLLALCKIARIRALNIAA-------DLYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY +L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYTLVIILTLVGKAIEGRMKKSD 225



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +     +Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAVSALVGFILGTLLALCKIARIRALNIAADLYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQI 87


>gi|325576597|ref|ZP_08147315.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161160|gb|EGC73275.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 238

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP                        T+      F     + +++++  T
Sbjct: 1   MTLLNNWLASLPFMTAERADYVISSFWPMMEGAILYTIPLAVISFFCGLFIAVIVAVICT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
               +   K  + +   YIS  +I G P LV I + +                       
Sbjct: 61  LPHPNLMTKILQGICRTYIS--IIRGTPMLVQIFIIFY-----------GLPEVGIKLEP 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ ++A+P+GQ EA+ A+G+ + +A    ++PQA+   +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASILAIPKGQWEASYAIGMNYTQAFVRTIMPQALHISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +++ +K++SLA  V  A+L  V   I  +  + I I      IY     ++++  
Sbjct: 168 SLSNTFISTVKDTSLASLVWIAELFRVAQNITAENYEFILIYSEAALIYWVFCFVLSIGQ 227

Query: 386 NRLNAKIAL 394
            RL  +++ 
Sbjct: 228 TRLEKRLSR 236


>gi|166032742|ref|ZP_02235571.1| hypothetical protein DORFOR_02457 [Dorea formicigenerans ATCC
           27755]
 gi|166027099|gb|EDR45856.1| hypothetical protein DORFOR_02457 [Dorea formicigenerans ATCC
           27755]
          Length = 236

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 112/234 (47%), Gaps = 5/234 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    + +    + +     I + S V G+++  F   L+R+F  +  K +  +YIS 
Sbjct: 5   FSVEFLIQSIPQIAVYLPITLLITIASCVAGLIVGFFI-ALARYFEVRVLKTVAKVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEI 284
             I G PT+V + L Y        +    +     ++     +   I L    AA+++EI
Sbjct: 64  --IRGTPTMVQLVLVYYGIPILLRVMNEAWGTSFDINGIHPVVFAIITLGLNAAAYMSEI 121

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RS L++V  GQ+EA  +L +T  +A   V++PQA    +P L + +++LLK +SL   +
Sbjct: 122 IRSALMSVDEGQVEACYSLNMTKWQALISVVIPQAFVVALPSLGNNFISLLKETSLVFNI 181

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              D+++    +  ++ +  E+ +    IY    +++   + ++   +  KE++
Sbjct: 182 AVVDIMAQARIVGARSYRYFEVYIAVSLIYWVCCMLLERLLAKIETYVRRKERR 235



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 34/81 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I V    T  +  +  +   I+G  +   R    +++  + +VY+   R  P +V +  +
Sbjct: 17  IAVYLPITLLITIASCVAGLIVGFFIALARYFEVRVLKTVAKVYISFIRGTPTMVQLVLV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y  +  +L + + +    F +
Sbjct: 77  YYGIPILLRVMNEAWGTSFDI 97


>gi|221317432|ref|ZP_03598726.1| hypothetical protein BsubsJ_02043 [Bacillus subtilis subsp.
           subtilis str. JH642]
          Length = 234

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 15/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +        +  +     + + SF+ G++L+L  T L+R    +  + +  +Y+S  
Sbjct: 17  WNLVQQSFWPILSGGIYYTIPLTILSFIFGMILALI-TALARMSKVRPLRWVFSVYVSA- 74

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV + + + L           F   +     F S  IA S    A+ +EI+R+
Sbjct: 75  -IRGTPLLVQLFIIFYL-----------FPAFNVTLDPFPSAVIAFSLNVGAYASEIIRA 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +++VP+GQ EA   +G+TH+K    V+LPQA R  IPPL++ +++L+K++SLA  +  A
Sbjct: 123 SILSVPKGQWEAGYTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVA 182

Query: 348 DLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      I  +   Q + I +   FIY  +  +++L  + +  ++   
Sbjct: 183 ELFRKAQEIGARNLDQILVIYIEAAFIYWIICFLLSLVQHVIERRLDRY 231



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 32/91 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G   T  L     I   I+  +    R+S  + + W+  VYV   R  P 
Sbjct: 21  QQSFWPILSGGIYYTIPLTILSFIFGMILALITALARMSKVRPLRWVFSVYVSAIRGTPL 80

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++    +     D          LN
Sbjct: 81  LVQLFIIFYLFPAFNVTLDPFPSAVIAFSLN 111


>gi|190893857|ref|YP_001980399.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190699136|gb|ACE93221.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 219

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G++L L  T ++R F       +   Y+  ++I G P LV + 
Sbjct: 10  WAGLVFTIPLTLLSFTFGLILGLI-TAIARLFGPAPVVVVARFYV--WVIRGTPLLVQLF 66

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 67  VIFY-----------GLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 115

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 116 AYSIGMSWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 175

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL+LS +++    RL  + A  
Sbjct: 176 TYEPLILYIEAALIYLALSSILSQLQVRLERRFARY 211



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L         I+G +    RL     V  + R YV V R  P LV +F +
Sbjct: 9   LWAGLVFTIPLTLLSFTFGLILGLITAIARLFGPAPVVVVARFYVWVIRGTPLLVQLFVI 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 69  FYGLPSIGILLDAFPAALIGFTLN 92


>gi|310766634|gb|ADP11584.1| Putative amino-acid transport system permease protein [Erwinia sp.
           Ejp617]
          Length = 227

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + +F LG+ L      L R +  +  ++L   Y+  +LI G P 
Sbjct: 12  FWPMLYAGLTFTIPLTLIAFTLGLSLGAVV-ALVRLYGPRPLQSLVRFYV--WLIRGTPL 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +               G       F +  I  +    A+ +EI+R+ L++VP+
Sbjct: 69  LVQLFLIFY-----------ALPGVGITIDAFPAAVIGFTLNIGAYTSEIIRATLLSVPK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G++  +  R +++PQA R  +PPL++ ++ L+K++SLA  +   +L     
Sbjct: 118 GQWEAAHSIGMSWSQTLRRIVMPQAARVAVPPLSNTFIALVKDTSLASVITVPELFLAAQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I   T Q + +      IYL LS +++    RL  ++A
Sbjct: 178 RIAAVTYQPLILYTEAAIIYLLLSSVLSALQARLEKRLA 216



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G   T  L          +G +V   RL   + +  + R YV + R  P L
Sbjct: 10  ESFWPMLYAGLTFTIPLTLIAFTLGLSLGAVVALVRLYGPRPLQSLVRFYVWLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++ ++  V    D       G  LN
Sbjct: 70  VQLFLIFYALPGVGITIDAFPAAVIGFTLN 99


>gi|254194309|ref|ZP_04900741.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           S13]
 gi|169651060|gb|EDS83753.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           S13]
          Length = 636

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVL-GQFN 255
           L     +R        A    +I  F    L  L+LI      L   +    P     F 
Sbjct: 102 L-----ARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|126444102|ref|YP_001063396.1| amino acid ABC transporter permease/ATP-binding protein
           [Burkholderia pseudomallei 668]
 gi|126223593|gb|ABN87098.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia pseudomallei 668]
          Length = 636

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------GQFN 255
           L     +R        A    +I  F    L  L+LI       +D   L        F 
Sbjct: 102 L-----ARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYDHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|257093639|ref|YP_003167280.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046163|gb|ACV35351.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 217

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 12/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++F+ SFVL + L L    L R         L   YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLQVFLISFVLAVPLGLVL-ALVRISRFVVLSGLVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A     AA+ AEI R+G+ ++ RGQ E A  LG
Sbjct: 74  LPFVPVI--------GVRLPDFPAAIVAFVLNYAAYFAEIFRAGIQSIDRGQYEGARVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L++ +  R ++LPQ ++ I+PP++++ + L+K++SL   +   DL+     I+ +     
Sbjct: 126 LSYPQTMRRIVLPQVLKRILPPMSNETITLVKDTSLIYVLAMNDLLRAARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              ++    YL +++++ L    L  K A+ +
Sbjct: 185 TPFVVAAAFYLVMTLVLTLGFQHLERKYAVYD 216



 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +     + A  +G ++   R+S   +++ +   Y+ + R  P ++ + F+
Sbjct: 11  LIEGTGVTLQVFLISFVLAVPLGLVLALVRISRFVVLSGLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|251790177|ref|YP_003004898.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247538798|gb|ACT07419.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 256

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 18/212 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFSF LG+++ L     +R    +  +     ++ T     L  + L+ + +  +F
Sbjct: 36  LLAVVFSFPLGVLIGL-----ARLSPWRGLRWAATAWVYT-----LRGIPLMMVVFWTYF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   N  G       F ++   L  Y +A+IAEIVR G+ A+P GQ EA+ ALG++
Sbjct: 86  CVPLLIGQNTSG-------FSTMLCTLVIYESAYIAEIVRGGIQALPHGQYEASRALGMS 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
           + K  RLV+LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   +  +
Sbjct: 139 YLKTLRLVVLPQALFNSLPSLVSQLVSIIKDSTLGYVINVPELTYAANQVSNQLLTKPFQ 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  I    Y  +   +    NRL + IA K +
Sbjct: 199 VFAIVALSYYIICFSLTWLANRLESYIANKRR 230



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  ++   ++ +  +G L+G  RLS  + + W    +V   R IP ++V+F+ Y
Sbjct: 25  LGGVLCTLLISLLAVVFSFPLGVLIGLARLSPWRGLRWAATAWVYTLRGIPLMMVVFWTY 84

Query: 150 KSVLSVLPIPDHSIVLP 166
             V  ++          
Sbjct: 85  FCVPLLIGQNTSGFSTM 101


>gi|218510008|ref|ZP_03507886.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 225

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G++L L  T ++R F       +   Y+  ++I G P LV + 
Sbjct: 16  WAGLVFTIPLTLLSFTFGLILGLV-TAIARLFGPAPVVVVARFYV--WVIRGTPLLVQLF 72

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 73  VIFY-----------GLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 121

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 122 AYSIGMSWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 181

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL LS +++    RL  + A  
Sbjct: 182 TYEPLILYIEAALIYLVLSSILSQLQVRLERRFARY 217



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L         I+G +    RL     V  + R YV V R  P LV +F +
Sbjct: 15  LWAGLVFTIPLTLLSFTFGLILGLVTAIARLFGPAPVVVVARFYVWVIRGTPLLVQLFVI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 75  FYGLPSIGILLDAFPAALIGFTLN 98


>gi|327190600|gb|EGE57689.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli
           CNPAF512]
          Length = 591

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +     +  ++ S    P     +    F+    L     T+   A   +   +LG  L+
Sbjct: 41  IFAAVVIVAALYSTFTNPRWGWGVFAEWFVAEPVLVGLGRTLLLTALAAISGSILGTALA 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     S      +   + LL     ++  L    L  L   +    P      F   + 
Sbjct: 101 LARVSRSPLLSGLSWGYIWLLRSIPIIVLLLILNNLGYLYETIRIGIPFTDTVLFDYPTV 160

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F + Y+ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAM
Sbjct: 161 QLLTPFAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAM 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           RSI+P   ++ + L K++S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 221 RSILPTGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTV 280

Query: 381 IALFMNRLNAKIALKEKK 398
           +++  + +    +    +
Sbjct: 281 LSVAQHYIERYFSRGAVR 298



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 20/210 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN-----IPPLVV 144
           LVG   T  L     I  +I+GT +   R+S + L++ +   Y+ + R+     +  ++ 
Sbjct: 75  LVGLGRTLLLTALAAISGSILGTALALARVSRSPLLSGLSWGYIWLLRSIPIIVLLLILN 134

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL---- 200
                   + +      +++  +         +   L +  N   F    V G +L    
Sbjct: 135 NLGYLYETIRIGIPFTDTVLFDYPTVQLLTPFAAAYLGLTLNQSAFFAEIVRGGILSVDH 194

Query: 201 -------SLFATRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                  +L   R  + F     +A    LP  +     +    ++V +    +L +   
Sbjct: 195 GQLEAAAALGLPRRRQAFRIVLPQAMRSILPTGFNELIGLAKSTSVVYVLALPELFYTVQ 254

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           V+ + N      +    +   I ++  + A
Sbjct: 255 VIYRRNLEVIPLLMVATVWYLIIMTVLSVA 284


>gi|309799568|ref|ZP_07693796.1| amino acid ABC transporter, permease protein [Streptococcus
           infantis SK1302]
 gi|308116806|gb|EFO54254.1| amino acid ABC transporter, permease protein [Streptococcus
           infantis SK1302]
          Length = 227

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I V    LG +L +     ++    K    L  +YI  F   G 
Sbjct: 7   PKYLPYFNYGALVTVLISVLVVFLGTILGIVL-AFAQRSKMKPLAWLANVYIWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   I +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQIGVLG--VDFSRLIPGIIIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ L +     ++   EKK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTLALKAFENRMGQGEKK 227



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++   +   TI+G ++   + S  K +AW+  VY+ +FR  P +V 
Sbjct: 9   YLPYFNYGALVTVLISVLVVFLGTILGIVLAFAQRSKMKPLAWLANVYIWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|328881414|emb|CCA54653.1| ABC-type polar amino acid transport system,ATPase component
           [Streptomyces venezuelae ATCC 10712]
          Length = 294

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +  +V    L + V  +   P     +    F     L    +T+          F 
Sbjct: 32  WRWVAVVVTAVLLVQFVHGLATNPGWEWDVFAAFFTTETILRAVWVTLQLTFYGTALGFA 91

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DK 248
           +GIVL+       R       +++   YI  F    +P +V +   + L +         
Sbjct: 92  IGIVLAFM-----RLSASPFLRSVAFGYIWAF--RSIPLIVQLLFWFNLAYLYKELSIGI 144

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F     + +  E  +  + L+ + AA+ AEIVR G++AV  GQ EAA +LG+   
Sbjct: 145 PFGPGFLSFDTTGLVGEMSAAVLGLALHQAAYAAEIVRGGVLAVDEGQAEAAASLGIPRL 204

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQAMRSI+P   ++ ++L K +S+   +   +L      +  + G+ + +++
Sbjct: 205 RQLRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMAIGELFYQVQVVYGRNGRVVPLLM 264

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+  +++  + +    A    +
Sbjct: 265 VATAWYVLLTTALSVVQHYVERHYAKGSVR 294



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 4/124 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + +  +   A+ V    T  L F G      IG ++   RLSA+  +  +   Y+  FR
Sbjct: 64  AFFTTETILRAVWV----TLQLTFYGTALGFAIGIVLAFMRLSASPFLRSVAFGYIWAFR 119

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           +IP +V + F +        +       P  +  +  GL            +   ++   
Sbjct: 120 SIPLIVQLLFWFNLAYLYKELSIGIPFGPGFLSFDTTGLVGEMSAAVLGLALHQAAYAAE 179

Query: 198 IVLS 201
           IV  
Sbjct: 180 IVRG 183


>gi|307130767|ref|YP_003882783.1| arginine ABC transporter membrane protein [Dickeya dadantii 3937]
 gi|306528296|gb|ADM98226.1| arginine transporter subunit; membrane component of ABC superfamily
           [Dickeya dadantii 3937]
          Length = 238

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
            + LP + +  F+ FG   L+L+    + LH     +     I    VSP F+   IALS
Sbjct: 54  LRGLPEILVVLFIYFGSSQLLLMLSDGFTLHLGLTQVPVKLAIDNFEVSP-FLCGVIALS 112

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ ++ +R  L AVPRGQ E+  ALG++     R +++PQ  R  +P L +Q+L L
Sbjct: 113 LLYAAYASQTLRGALKAVPRGQWESGQALGMSKSVIFRRLIMPQMWRHALPGLGNQWLVL 172

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK+++L   +   DL+    +I  +T +     +I   IYL ++++    +NR+  +   
Sbjct: 173 LKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLVITLLSQAILNRIEVRATR 232

Query: 395 KEKK 398
            E++
Sbjct: 233 FERR 236


>gi|300781314|ref|ZP_07091168.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium genitalium ATCC 33030]
 gi|300533021|gb|EFK54082.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium genitalium ATCC 33030]
          Length = 305

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 6/263 (2%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  ++++      +        +     F    + R L+    T+       +   VL
Sbjct: 21  RWVAAVILLVLFALFIFDAARREAYGWGTYFAYLFDTRILTAAGHTLALTVLAMIIGVVL 80

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L++      R       K++  LY+  F    +   ++        +    LG    
Sbjct: 81  GVILAVM-----RMSPNPVFKSIAWLYLWVFRGTPVYVQLVFWGLLGAIYQTVNLGFTEI 135

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
              +  S  F    + L    A ++AEIVRSG+ +VP GQ+EA+ ALG+      R  +L
Sbjct: 136 SMEALTSSAFALAVLGLGLNEAGYMAEIVRSGINSVPEGQIEASKALGMGWGMTMRRTVL 195

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           PQAMR IIPP  +++++LLK SSL VA+ ++ +L      I     + + ++L+    YL
Sbjct: 196 PQAMRIIIPPTGNEFISLLKTSSLVVAIPYSLELYGRSQDIAAALFEPVPMLLVAATWYL 255

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++ +    L         +
Sbjct: 256 VITSILMIGQYYLERYFDRGVTR 278



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 22/119 (18%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           +   +LL +  L+  +      E         +L +                      IL
Sbjct: 23  VAAVILLVLFALFIFDAARR--EAYGWGTYFAYLFDTR--------------------IL 60

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
               +T  L    MI   ++G ++   R+S N +   I  +Y+ VFR  P  V + F  
Sbjct: 61  TAAGHTLALTVLAMIIGVVLGVILAVMRMSPNPVFKSIAWLYLWVFRGTPVYVQLVFWG 119


>gi|158422441|ref|YP_001523733.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158329330|dbj|BAF86815.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 220

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 15/235 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                FG+  + R L    L +     I +   VLG+ + L A  L++    +    L  
Sbjct: 1   MYHWDFGLVWSYRWLLLDGLGVTVAFTIAIV--VLGLAIGLLAG-LAKLSPFRPVGWLAS 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YI  F     P LV +      ++  P+L              F +  +ALS Y  +F 
Sbjct: 58  AYIEVF--RCTPVLVQLI---WFYYAMPILTGIE-------MSAFTAGILALSLYGGSFY 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R G++++ RGQ EA  ALG+   +  R V+LPQA++ ++PPL +Q +   KN+SL 
Sbjct: 106 AEIIRGGIVSIDRGQTEAGEALGMVPSQIMRRVVLPQALKRMVPPLMNQSIIQFKNTSLV 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   DL+  G    + + + +E+  +   IY      + + + R  A++A+ +
Sbjct: 166 SVLAVPDLLYQGQVAAHDSYRPLELYTVIAIIYFLALFPLTVLVRRGEARLAVTD 220



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 35/76 (46%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    SY   +L G   T     + ++    IG L G  +LS  + V W+   Y+EVFR
Sbjct: 5   DFGLVWSYRWLLLDGLGVTVAFTIAIVVLGLAIGLLAGLAKLSPFRPVGWLASAYIEVFR 64

Query: 138 NIPPLVVIFFLYKSVL 153
             P LV + + Y ++ 
Sbjct: 65  CTPVLVQLIWFYYAMP 80


>gi|134278590|ref|ZP_01765304.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia pseudomallei 305]
 gi|134250374|gb|EBA50454.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia pseudomallei 305]
          Length = 636

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVL-GQFN 255
           L     +R        A    +I  F    L  L+LI      L   +    P     F 
Sbjct: 102 L-----ARVSRSPLLVACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFA 156

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++
Sbjct: 157 EVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIV 216

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL
Sbjct: 217 LPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYL 276

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++   ++  + A    +
Sbjct: 277 IILTVLSIVQAQVERRYARGAVR 299


>gi|65318067|ref|ZP_00391026.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
          Length = 218

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG+VL++      R           L ++ T  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRI----------LNWLGTAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITXNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 37/72 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVLSVLPIPD 160
           Y ++  V    +
Sbjct: 74  YFALPVVGITXN 85


>gi|254509082|ref|ZP_05121185.1| ABC-type glutamine transport system, permease component [Vibrio
           parahaemolyticus 16]
 gi|219548015|gb|EED25037.1| ABC-type glutamine transport system, permease component [Vibrio
           parahaemolyticus 16]
          Length = 246

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 17/253 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L   F L                   G+      ++    T+  +    +F+  +G++++
Sbjct: 8   LFFPFLLTGCSDYQWGWYVLDPSTEQGLTNIRFLIAGFNDTIQVSLLSMLFAMTIGLLVA 67

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L A       +    K +  LY+   +I  +P LVL+     +++  P L   +      
Sbjct: 68  LPA-----LSNSPILKGINRLYVE--IIRSIPVLVLLL---WVYYGMPTLLDVSL----- 112

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL++ +  RLV+LPQA R
Sbjct: 113 --DHFWAGVIALTVAESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMRLVILPQAFR 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PPL +Q++ +LK SSL   +G +DL      ++      +EI    +  YL L +++
Sbjct: 171 QILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILLV 230

Query: 382 ALFMNRLNAKIAL 394
           +  +  L  +IA+
Sbjct: 231 SQAVRWLEKRIAI 243



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 40/70 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    ++ GF +T  ++   M+ A  IG LV    LS + ++  I R+YVE+ R+IP LV
Sbjct: 36  TNIRFLIAGFNDTIQVSLLSMLFAMTIGLLVALPALSNSPILKGINRLYVEIIRSIPVLV 95

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 96  LLLWVYYGMP 105


>gi|218895695|ref|YP_002444106.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228899326|ref|ZP_04063589.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 4222]
 gi|228963738|ref|ZP_04124880.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|218544782|gb|ACK97176.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228795974|gb|EEM43440.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228860357|gb|EEN04754.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 4222]
          Length = 218

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++ +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWVGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVE 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWVGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|168186416|ref|ZP_02621051.1| amino acid ABC transporter, permease component [Clostridium
           botulinum C str. Eklund]
 gi|169295523|gb|EDS77656.1| amino acid ABC transporter, permease component [Clostridium
           botulinum C str. Eklund]
          Length = 215

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 106/222 (47%), Gaps = 14/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           ++ V S +LG ++ +    L +  + K    +   Y  T++  G P
Sbjct: 8   NMLPILLKGSVITIELTVISVILGSIIGVIVAGL-KLSNNKIVVYIVSFY--TWIFRGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             + +   Y             F+G S      ++  I LS  + A+++EI+R G++++ 
Sbjct: 65  MFLQLFFFYY---------GLPFLGISL--TPMVAAIIGLSLNSGAYMSEIIRGGIVSID 113

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA  +LG T+ +    V+LPQA R I+P + ++++ +LK++SL  A+   +L+   
Sbjct: 114 KGQFEACKSLGFTNIQTMTKVILPQAFRVILPSVGNEFITMLKDTSLVSAITMEELMRNA 173

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              ++ TG  +E  LI   +YL ++ +  +  +    ++++ 
Sbjct: 174 QLQMSSTGSPVEPFLIAGLLYLLMTTVFNVIFSLTEKRLSVY 215


>gi|308070241|ref|YP_003871846.1| Probable amino-acid ABC transporter permease protein yckJ
           [Paenibacillus polymyxa E681]
 gi|305859520|gb|ADM71308.1| Probable amino-acid ABC transporter permease protein yckJ
           [Paenibacillus polymyxa E681]
          Length = 222

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 110/210 (52%), Gaps = 14/210 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF LG+VL+L  T L+R    +  K +   Y+  ++I G P LV +   Y + +  
Sbjct: 27  LTLISFALGLVLALI-TALARLSKWRILKLIFGFYV--WVIRGTPLLVQL---YIIFYGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P +       G T+ P F++  I  +    A+ +EI+R+ +I++  GQ EA  +LG+T  
Sbjct: 81  PSV-------GITLDP-FIASVIGFTLSVGAYSSEIIRAAIISIQEGQWEAGYSLGMTRW 132

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQA R  +PPL + +++L+K++SLA  + + ++      I+  T + + +  
Sbjct: 133 QVLRRIVLPQASRVSVPPLANSFISLVKDTSLAATITYVEMFRTANQIVATTYEPLLVYT 192

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               IYL  S ++ +  N L  ++     +
Sbjct: 193 EAGVIYLLFSTILTVLQNYLEKRLGRFSVR 222



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +  G   T  L         ++  +    RLS  +++  I   YV V R  P L
Sbjct: 11  DSLLPLLKAGVSFTIPLTLISFALGLVLALITALARLSKWRILKLIFGFYVWVIRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V ++ ++  + SV    D  I    G  L+
Sbjct: 71  VQLYIIFYGLPSVGITLDPFIASVIGFTLS 100


>gi|118469698|ref|YP_891108.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170985|gb|ABK71881.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 590

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 16/237 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                              +     + V + ++G+VL      ++        +    +Y
Sbjct: 349 SFLDWDLYKQAIPDLLKTGLPNTLILTVSAGIIGLVLG-MGLAMAGISRAVWLRWPARIY 407

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              F   GLP +V+I L          LG    +G  T +  +     AL    AA+I E
Sbjct: 408 TDIF--RGLPEVVIILLI--------GLGVGPIVGHLTGNNPYPLGIAALGLMAAAYIGE 457

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG+ +V  GQ+EAA ALG ++R + RLV++PQ +R ++P L +Q+++LLK SSL   
Sbjct: 458 IFRSGIQSVEAGQLEAARALGFSYRSSMRLVVVPQGVRRVLPALMNQFISLLKASSLVYF 517

Query: 344 VGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G      +L  VG  +  QTG  +  ++     YL L+I +   +N ++ ++    
Sbjct: 518 LGLIANQRELFQVGRDLNAQTGN-LSPLVAAGLFYLMLTIPLTHLVNYIDNRLRRGR 573



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 10/213 (4%)

Query: 71  EIDQGIVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           ++    + +     +    +  G  NT  L  S  I   ++G  +    +S    + W  
Sbjct: 345 QLADSFLDWDLYKQAIPDLLKTGLPNTLILTVSAGIIGLVLGMGLAMAGISRAVWLRWPA 404

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           R+Y ++FR +P +V+I  +   V  ++     +   P G+       +     +  +   
Sbjct: 405 RIYTDIFRGLPEVVIILLIGLGVGPIVGHLTGNNPYPLGIAALGLMAAAYIGEIFRSGIQ 464

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTG----KALPLLYISTFLIFGLPTLVLIALKYQLH 245
            V +  L    +L  +  S            + LP L      +    +LV     Y L 
Sbjct: 465 SVEAGQLEAARALGFSYRSSMRLVVVPQGVRRVLPALMNQFISLLKASSLV-----YFLG 519

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                   F            +S  +A   +  
Sbjct: 520 LIANQRELFQVGRDLNAQTGNLSPLVAAGLFYL 552


>gi|162149590|ref|YP_001604051.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|161788167|emb|CAP57772.1| putative transport protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 538

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 9/229 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +FL+                + V S +  IV+++    L  +  +   K+    Y++ F 
Sbjct: 313 VFLSALASPAFLRGAGVTLVMAVLSHMTAIVIAI-PMALVLNGRDGLLKSGVRAYVALF- 370

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
               PTL+ +   +        L QF  +        F++ +I+LS   AA+  EI R+ 
Sbjct: 371 -RAAPTLLQLLFVWN------ALPQFLPVFREAWFTPFLAAWISLSINEAAYQVEINRAA 423

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+  GQ  A  ALG+T  +  R V+ PQA+R  +PP  +++++L+K +SLA  +   +
Sbjct: 424 LQAIDPGQALAGDALGMTRMQVYRHVIFPQALRIALPPTINEFISLIKTTSLASVISLQE 483

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L++V    + +T    E     +  YL +         R+  + A  ++
Sbjct: 484 LLAVTQINVARTFAFTEYYAAALVYYLLIVFFFLGLQRRIERRFAWADR 532



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  +A    + A +I   +       + L+    R YV +FR  P L+ + F
Sbjct: 322 AFLRGAGVTLVMAVLSHMTAIVIAIPMALVLNGRDGLLKSGVRAYVALFRAAPTLLQLLF 381

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFL 171
           ++ ++   LP+   +   PF    
Sbjct: 382 VWNALPQFLPVFREAWFTPFLAAW 405


>gi|319942012|ref|ZP_08016331.1| hypothetical protein HMPREF9464_01550 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804396|gb|EFW01274.1| hypothetical protein HMPREF9464_01550 [Sutterella wadsworthensis
           3_1_45B]
          Length = 221

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 14/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + SF +G+V+++    ++     KT    PL  I  ++  G P LV + + + 
Sbjct: 22  CVTIPLTLISFAIGLVVAV---AIALIRTAKTPVLEPLARIYVWIFRGTPALVQLFVIF- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V   F S  IA S    A+ +E +R+ + AVP+GQ+EA + +
Sbjct: 78  ----------FGLPSIGIVIDAFPSAVIAFSLNVGAYASEALRAAISAVPKGQLEAGLCV 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +    ++LPQA R+  PPL +++++L+KN+SLA ++   ++      I  +T + 
Sbjct: 128 GMSWTQTMFRIVLPQAFRTAFPPLFNEFISLVKNTSLASSITVYEMFMSAQRIAARTYEP 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + L    IYL+ + +++        K+
Sbjct: 188 FWLYLEAAVIYLAFTTILSRIQVWGEKKL 216



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   ++ G   T  L         ++   +   R +   ++  + R+YV +FR  P 
Sbjct: 10  SDSFTQLLIPGICVTIPLTLISFAIGLVVAVAIALIRTAKTPVLEPLARIYVWIFRGTPA 69

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+  + D          LN
Sbjct: 70  LVQLFVIFFGLPSIGIVIDAFPSAVIAFSLN 100


>gi|229075860|ref|ZP_04208836.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock4-18]
 gi|229098623|ref|ZP_04229563.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-29]
 gi|229117649|ref|ZP_04247020.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock1-3]
 gi|228665828|gb|EEL21299.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock1-3]
 gi|228684702|gb|EEL38640.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-29]
 gi|228707175|gb|EEL59372.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock4-18]
          Length = 225

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 19  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DLYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY +L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYTLVIILTLVGKAIEGRMKKSD 225



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +     +Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADLYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQI 87


>gi|213965269|ref|ZP_03393466.1| ABC-type amino acid transport system, permease component
           [Corynebacterium amycolatum SK46]
 gi|213952121|gb|EEB63506.1| ABC-type amino acid transport system, permease component
           [Corynebacterium amycolatum SK46]
          Length = 326

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 6/263 (2%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I   +++      V+       +   + F    + R  +    T+       +   V 
Sbjct: 32  RWITAAILLLLFLWFVIGAARNEAYHWDVYFQYLFDTRIAAAAGWTIALTVLAMIIGIVG 91

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G ++++      R         +   Y+  F    +   ++        +    LG    
Sbjct: 92  GAIVAVL-----RMSENPVLSTVSWFYLWVFRGTPVYVQLVFWGLLGTIYSTINLGVTEV 146

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
              + +S  F+  ++ L    +A++AEIVR+G+ AVP GQ EA+ ALG++  +  R  +L
Sbjct: 147 DLSTVLSNTFVLAFVGLGLNESAYMAEIVRAGIQAVPEGQTEASKALGMSWWQTVRRTIL 206

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           PQAMR IIPP  +++++LLK +SL +AV F+ +L      I N     + ++L+    YL
Sbjct: 207 PQAMRIIIPPTGNEFISLLKTTSLVIAVPFSLELYGRSTDIANALFLPVPMLLVAATWYL 266

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++ +    L    A    +
Sbjct: 267 VITSILMVGQFYLERYFARGATR 289



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 21/118 (17%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           I A +L ++FLW V     N E  +  +   +L +                      I  
Sbjct: 34  ITAAILLLLFLWFVIGAARN-EAYHWDVYFQYLFDTR--------------------IAA 72

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
               T  L    MI   + G +V   R+S N +++ +   Y+ VFR  P  V + F  
Sbjct: 73  AAGWTIALTVLAMIIGIVGGAIVAVLRMSENPVLSTVSWFYLWVFRGTPVYVQLVFWG 130


>gi|187779934|ref|ZP_02996407.1| hypothetical protein CLOSPO_03530 [Clostridium sporogenes ATCC
           15579]
 gi|187773559|gb|EDU37361.1| hypothetical protein CLOSPO_03530 [Clostridium sporogenes ATCC
           15579]
          Length = 219

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 13/219 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R L F         KI + SF++ I+L+     L  +   K    +   Y+  F   G 
Sbjct: 9   FRNLPFLLKATLVTIKITLLSFIVAIILAFIVGVLRTYKFSKILDLILNAYVEIF--RGS 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y                        ++  I L+   AA+++EI+R+ ++++
Sbjct: 67  PLLIQLFFIYY-----------GLPSVGIAMDAEVAAVIGLALNGAAYMSEIIRAAILSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EA  +LG T  +  R ++LPQA +  +PPL + + +LLK++SL   +   +L   
Sbjct: 116 DRGQEEAGFSLGYTRFQNLRYIILPQAAQISVPPLVNGFSSLLKDTSLVSVISITELTRS 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  I ++T +  E+ L     Y  L+ +++L    +  +
Sbjct: 176 GNLIYSRTARPFEVYLTLGLFYFVLTYIVSLCSKFIEKR 214



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           +L   + T  +     I A I+  +VG  R     K++  I   YVE+FR  P L+ +FF
Sbjct: 15  LLKATLVTIKITLLSFIVAIILAFIVGVLRTYKFSKILDLILNAYVEIFRGSPLLIQLFF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +Y  + SV    D  +    G+ LN     
Sbjct: 75  IYYGLPSVGIAMDAEVAAVIGLALNGAAYM 104


>gi|113866799|ref|YP_725288.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525575|emb|CAJ91920.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 219

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 18/223 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+       VF  +LG V++L         H +  KA    Y+S  ++ G P L
Sbjct: 15  LQGTLLTIKFALWSMVFGLMLGTVVALMG-----ISHSRVLKAAARTYVS--IMRGTPLL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y               G         +  + LS    A+++E +R  ++ V RG
Sbjct: 68  VQIFVVYY-----------GLPGIGIALEPTPAGVLTLSLNVGAYLSESMRGAILGVSRG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA +LGLT  +A R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     
Sbjct: 117 QWLAAYSLGLTPAQALRYVIGPQALRLAVPSLSNSLISLIKDTSLVSVITVTELLRTAQE 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  T Q + + L    IY  LS  ++   + L  +++L  + 
Sbjct: 177 VIAATYQPLPLYLAVAAIYWVLSTGLSGVQHMLERRLSLPGRH 219



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 33/66 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   ++GT+V    +S ++++    R YV + R  P LV IF 
Sbjct: 13  VLLQGTLLTIKFALWSMVFGLMLGTVVALMGISHSRVLKAAARTYVSIMRGTPLLVQIFV 72

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 73  VYYGLP 78


>gi|289178331|gb|ADC85577.1| Amino acid ABC transporter permease protein [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 353

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 12/264 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+ F    V  ++  P     + +    N R L     T      + V S V+  
Sbjct: 55  VAAIIVVIFAAMIVKGLITNPRFEWNVVWKYLFNERVLEGVGYT----LLLTVISMVV-A 109

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           ++      + R       + +   YI  F    + T ++    +      L    P+   
Sbjct: 110 IVLAVVLAVMRKSVNPVLRGVSWFYIWFFRGTPVYTQLVFWGLFAVLIPRLSLGIPLTSV 169

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I    +   F + +I L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 170 EFWSIDSQAIITAFNAAWIGLALNEAAYLAEIVRAGLDAVDPGQEEAAKALGMKRSMIMR 229

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR IIPP  ++ + +LK +SL +AV F  DL      I N+  + I ++L+  
Sbjct: 230 RVILPQAMRIIIPPTGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRIYKPIPLLLVAS 289

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
             YL ++ ++ +  + L       
Sbjct: 290 IWYLFITSILMVIQSMLEKHFGRG 313



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 21/128 (16%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+ A+++ +     V  +  N  +   ++   +L                        +
Sbjct: 53  QIVAAIIVVIFAAMIVKGLITN-PRFEWNVVWKYLFNER--------------------V 91

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+ A ++  ++   R S N ++  +   Y+  FR  P    + F  
Sbjct: 92  LEGVGYTLLLTVISMVVAIVLAVVLAVMRKSVNPVLRGVSWFYIWFFRGTPVYTQLVFWG 151

Query: 150 KSVLSVLP 157
              + +  
Sbjct: 152 LFAVLIPR 159


>gi|239978685|ref|ZP_04701209.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291450580|ref|ZP_06589970.1| ABC transporter permease [Streptomyces albus J1074]
 gi|291353529|gb|EFE80431.1| ABC transporter permease [Streptomyces albus J1074]
          Length = 304

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 14/251 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SV+        +    F     L    LT+   A + V  FVLG +L++     +R    
Sbjct: 59  SVVRNEAFQWGVVADYFTTPAVLRGLGLTLWLTALVMVLGFVLGTLLAV-----ARMSAN 113

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKPVLGQFNFIGGSTVSPEF 266
              K++   YI  F     P LV +   +       QL    P   +F  +    +    
Sbjct: 114 PVLKSVSWGYIWFF--RSTPVLVQLLFWFNIGALYPQLGLGIPFGPEFLTVRTVNLLGPL 171

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I L+ + AA+ AE+VR GL++V RGQ EAA +LGL   +  R ++LPQAMR+I+PP
Sbjct: 172 TVALIGLTLHEAAYAAEVVRGGLLSVDRGQTEAAQSLGLGRWRRLRRIVLPQAMRAIVPP 231

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  +  LK +S+   +   DL+     + ++T Q I ++L+    Y  ++ ++ +  +
Sbjct: 232 AGNMLIGTLKGTSIVSVIAVQDLLYSVQLVYHRTYQVIPLLLVATLWYALVTTVLTVGQH 291

Query: 387 RLNAKIALKEK 397
            +       E+
Sbjct: 292 YVERYYGRSER 302



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T WL    M+   ++GTL+   R+SAN ++  +   Y+  FR+ P LV + F
Sbjct: 79  AVLRGLGLTLWLTALVMVLGFVLGTLLAVARMSANPVLKSVSWGYIWFFRSTPVLVQLLF 138

Query: 148 LYKSV 152
            +   
Sbjct: 139 WFNIG 143


>gi|226948691|ref|YP_002803782.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
 gi|226844167|gb|ACO86833.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
          Length = 219

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 13/227 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     +  R L F         KI + SF++ I L++    L  +   K    +   Y+
Sbjct: 1   MELNFDIIFRNLPFLLKATLVTIKITLLSFIVAITLAVIVGILRTYKFSKILDLILNAYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ +   Y                        ++  I L+   AA+++EI
Sbjct: 61  EIF--RGSPLLIQLFFIYY-----------GLPSVGIAMDAEVAAVIGLALNGAAYMSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + + +LLK++SL   +
Sbjct: 108 IRAAIISIDRGQEEAGFSLGYTRFQNLHYIILPQAVKISVPPLVNGFSSLLKDTSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L   G  I ++T +  E+ L     Y  L+ ++++    +  +
Sbjct: 168 SITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEKR 214



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           +L   + T  +     I A  +  +VG  R     K++  I   YVE+FR  P L+ +FF
Sbjct: 15  LLKATLVTIKITLLSFIVAITLAVIVGILRTYKFSKILDLILNAYVEIFRGSPLLIQLFF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +Y  + SV    D  +    G+ LN     
Sbjct: 75  IYYGLPSVGIAMDAEVAAVIGLALNGAAYM 104


>gi|225387881|ref|ZP_03757645.1| hypothetical protein CLOSTASPAR_01651 [Clostridium asparagiforme
           DSM 15981]
 gi|225046008|gb|EEG56254.1| hypothetical protein CLOSTASPAR_01651 [Clostridium asparagiforme
           DSM 15981]
          Length = 263

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 93/242 (38%), Gaps = 15/242 (6%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
           +P      V+          L    ++M++     V   ++G  + +  T  +       
Sbjct: 1   MPTDFFGRVMLVFSKYGMSMLQGALISMESALAGTVIGCLIGFAVGIVQTIHTEKGDNPI 60

Query: 216 GKALPL-----LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
            K +       L        G P +      Y   F             +       +  
Sbjct: 61  KKGVVWAVKLVLNAYVEFFRGTPMMAQAMFIYYGLFPL----------LNINMTMLKAAI 110

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             LS  T A++AE VR G++++  GQ E A ++G+TH +    V+LPQA+R+I+P + + 
Sbjct: 111 FILSINTGAYMAETVRGGILSIDPGQTEGAKSIGMTHVQTMIYVILPQALRNIMPQIGNN 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  +K+S +   +G A+L+              E   I M +Y  ++   +  + RL  
Sbjct: 171 LIINIKDSCVLSVIGLAELLYKTKAAAGALYMNFETYTITMIMYFIMTFTCSRILRRLEN 230

Query: 391 KI 392
           K+
Sbjct: 231 KM 232



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 12/83 (14%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICR 130
           S Y  ++L G + +   A +G +   +IG  VG  +                  V  +  
Sbjct: 14  SKYGMSMLQGALISMESALAGTVIGCLIGFAVGIVQTIHTEKGDNPIKKGVVWAVKLVLN 73

Query: 131 VYVEVFRNIPPLVVIFFLYKSVL 153
            YVE FR  P +    F+Y  + 
Sbjct: 74  AYVEFFRGTPMMAQAMFIYYGLF 96


>gi|225388954|ref|ZP_03758678.1| hypothetical protein CLOSTASPAR_02696 [Clostridium asparagiforme
           DSM 15981]
 gi|225044984|gb|EEG55230.1| hypothetical protein CLOSTASPAR_02696 [Clostridium asparagiforme
           DSM 15981]
          Length = 226

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 15/235 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             V+   +           +T+       + + VLG +  LF     +       K +  
Sbjct: 1   MQVINVLVQYYPLFFQALGVTLKMTVVSLIAATVLGTIFGLF-----KVSGMGILKVIAD 55

Query: 222 LYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           +YI   +I G P +V + + Y       KP    +N IGG++      +  +ALS    A
Sbjct: 56  IYID--IIRGTPLMVQVFIIYYGLGSVLKPYGFSWNAIGGAS-----TAGMVALSLNAGA 108

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AEI+R G+ AV +GQMEAA +LGL + KA R ++LPQA R+++P + +Q++  LK++S
Sbjct: 109 YMAEIIRGGIEAVDKGQMEAARSLGLPYGKAMRKIILPQAFRTMMPSIINQFIITLKDTS 168

Query: 340 LAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   +G  +L   G  I   +    + I L     YL +  +++     +  K++
Sbjct: 169 LVSVIGPRELTQNGKIIAANSASLVMPIWLSVALFYLVVCTILSRVAKIVERKVS 223



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y          T  +    +I AT++GT+ G  ++S   ++  I  +Y+++ R  P +V
Sbjct: 9   QYYPLFFQALGVTLKMTVVSLIAATVLGTIFGLFKVSGMGILKVIADIYIDIIRGTPLMV 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFG 168
            +F +Y  + SVL     S     G
Sbjct: 69  QVFIIYYGLGSVLKPYGFSWNAIGG 93


>gi|167628305|ref|YP_001678804.1| glutamine abc transporter, glutamine-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
 gi|167591045|gb|ABZ82793.1| glutamine abc transporter, glutamine-binding protein, putative
           [Heliobacterium modesticaldum Ice1]
          Length = 220

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 14/234 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                + +    + + F    +    ++ + S  L     +    L      +  +   L
Sbjct: 1   MDWSKWTVLFEPKNVKFLMTGLQWTIELALISIALSFFFGIVICAL------RISRYPFL 54

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y +   +  L  L LI L +  +F  P +            P+F +  +A + +T+A +
Sbjct: 55  RYPAFLYVESLRNLPLILLIFFTYFALPKI--------GLGLPKFWAAVVAFTIFTSALV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R G+ +VP+GQ EAA A G T+ +    ++LPQA+R +IPPL SQ++ L K++S A
Sbjct: 107 AEIIRGGIQSVPKGQWEAARAQGFTYLETMVYIILPQALRKMIPPLISQFITLTKDTSYA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +G  +L   G  I  +    +++      IY  ++  ++     +  ++A+ 
Sbjct: 167 SIIGLTELTEHGKLIFIEHNNPVQVFFFVACIYFVVNFTLSRLGMYMEKRMAIG 220



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 35/75 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  LA   +  +   G ++ A R+S    + +   +YVE  RN+P +++IFF 
Sbjct: 18  LMTGLQWTIELALISIALSFFFGIVICALRISRYPFLRYPAFLYVESLRNLPLILLIFFT 77

Query: 149 YKSVLSVLPIPDHSI 163
           Y ++  +        
Sbjct: 78  YFALPKIGLGLPKFW 92


>gi|153010841|ref|YP_001372055.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562729|gb|ABS16226.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 239

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 113/236 (47%), Gaps = 9/236 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F      + L    LT+   A   VF  +L ++ +L      R    K    +  L
Sbjct: 1   MSLEFYSDAFFQMLGGVPLTLKLAATSIVFGAILALLFALM-----RLSGIKVLDWIARL 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F+  G P LV I + Y      P +          +   +    IAL+   AA+ +
Sbjct: 56  YV--FVFRGTPLLVQIFIIYYGLSQFPAIRYSFL--WPVLREPYWCAIIALTLNNAAYAS 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R GL++VP GQ+EAA A G++     R +++P A+R  +P   ++ ++++K +SLA 
Sbjct: 112 EIIRGGLLSVPHGQIEAAKACGMSSFTCFRRIVMPLAVRQALPGYGNEMISMIKATSLAS 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   ++  +   +I ++ +AIEI +I   IYL+++ ++   +     ++    ++
Sbjct: 172 IITLMEVTGIAAKLIAESYRAIEIFVIAGAIYLAINFVLTRALMFAEYRLTPYLRQ 227



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 1/110 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA + ++   I+  L    RLS  K++ WI R+YV VFR  P LV IF +
Sbjct: 13  MLGGVPLTLKLAATSIVFGAILALLFALMRLSGIKVLDWIARLYVFVFRGTPLLVQIFII 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           Y   LS  P   +S + P         +   TL     A   +   +L +
Sbjct: 73  YYG-LSQFPAIRYSFLWPVLREPYWCAIIALTLNNAAYASEIIRGGLLSV 121


>gi|269120482|ref|YP_003308659.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614360|gb|ACZ08728.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 239

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 2/221 (0%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATR--LSRHFHEKTGKALPLLYISTFLIFGLP 233
           L    LT+       +FS ++GI +    +     ++ +    K L  L      I    
Sbjct: 19  LDGLRLTLIITFFSLIFSTLIGIGIGYLRSLTTKQKNLYNTVIKVLQFLAKEYIDIIRGT 78

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L++ A  + L     ++     I   T     ++  I +S    A++AEI R G+ A+ 
Sbjct: 79  PLIVQAFFFYLALVPLIVNPLIKIWFPTGMSAEIAGVIIISLNAGAYMAEIFRGGIQAID 138

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA +LGL ++ A R V+LPQA++++IP + +Q++  LK++SL   +G  +L   G
Sbjct: 139 KGQMEAARSLGLPYKHAMRKVVLPQAVKNMIPAILNQFIISLKDTSLLTIIGVPELTGNG 198

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            TI     +  E  LI   +Y  +  +++   +++  K+ +
Sbjct: 199 KTISAANYKYFETYLIIGIMYYVIIKVLSFVFSKIEEKLNV 239



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----------LVAWICRVYVEVFRN 138
           +L G   T  + F  +I +T+IG  +G  R    K          ++ ++ + Y+++ R 
Sbjct: 18  LLDGLRLTLIITFFSLIFSTLIGIGIGYLRSLTTKQKNLYNTVIKVLQFLAKEYIDIIRG 77

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            P +V  FF Y +++ ++  P   I  P GM
Sbjct: 78  TPLIVQAFFFYLALVPLIVNPLIKIWFPTGM 108


>gi|269796734|ref|YP_003316189.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
 gi|269098919|gb|ACZ23355.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
          Length = 374

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +    V   L   V S++        + F        LS    T+       V  F 
Sbjct: 51  WRYVATAAVAVLLAMVVSSLVTNQRWEWSIVFQYLTWPSILSGLWGTLRLTFVAAVIGFG 110

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
           LG VL+L   RLSR    +      + +  T++   +P ++ + L Y L +  P L    
Sbjct: 111 LGTVLALM--RLSRSPLLR-----AVSWAYTWVFRSVPLILQLLLWYNLAYLYPTLSLGI 163

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F   G   V  +F +  + L    AA+ AEIVR+G+++V +GQ EAA ALG+   
Sbjct: 164 PFGPSFAEFGTLDVINKFGAAILGLGLSQAAYSAEIVRAGILSVDQGQHEAAAALGIPRA 223

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           + +  ++LPQAMR+I+P   ++ + L+K +S+   + + +L    G I  +  + + +++
Sbjct: 224 RQSTRIVLPQAMRTIVPTSVNEIIGLVKGTSVVYVLAYGELFYTVGVIYGRNQRVVPLLM 283

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ ++ +I +    +    A    +
Sbjct: 284 VAAIWYVIITTVITVIQFYVERHYAKGAVR 313



 Score = 54.6 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             +IL G   T  L F   +    +GT++   RLS + L+  +   Y  VFR++P ++ +
Sbjct: 87  WPSILSGLWGTLRLTFVAAVIGFGLGTVLALMRLSRSPLLRAVSWAYTWVFRSVPLILQL 146

Query: 146 FFLYK 150
              Y 
Sbjct: 147 LLWYN 151


>gi|296534282|ref|ZP_06896760.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296265398|gb|EFH11545.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 287

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 8/253 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +I  L   +     + D         F     ++    T+            LG+V ++ 
Sbjct: 37  IIILLLAGLARAFAVGDIEWNFVGAFFTAPAIMAGLYNTLWMTFAAMALGIALGVVTAVM 96

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTV 262
                R       + + + Y   F   G P ++ + L + +    P LG  +F +    V
Sbjct: 97  -----RMSPNPVLQGVAMGYTWLF--RGTPVILQLLLWFNMALIFPRLGFGDFSVRTVDV 149

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               ++  + L     A+ +E++R+G+++V  GQ EAA A+G+T  +A R ++ PQAM+ 
Sbjct: 150 MTPALAALLGLGINQGAYTSEVIRAGMLSVDAGQYEAAKAIGMTRLRALRRIIFPQAMKV 209

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPPL ++++ ++K +SLA  + FA+++     I     + IE++++    YL +  ++ 
Sbjct: 210 VIPPLGNEFIGMVKLTSLASVIQFAEILHAAQNIYYANSRVIELLIVAALWYLIIVSVLT 269

Query: 383 LFMNRLNAKIALK 395
                L  + A  
Sbjct: 270 PLQMLLERRFARG 282



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 31/66 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           AI+ G  NT W+ F+ M     +G +    R+S N ++  +   Y  +FR  P ++ +  
Sbjct: 67  AIMAGLYNTLWMTFAAMALGIALGVVTAVMRMSPNPVLQGVAMGYTWLFRGTPVILQLLL 126

Query: 148 LYKSVL 153
            +   L
Sbjct: 127 WFNMAL 132


>gi|229829573|ref|ZP_04455642.1| hypothetical protein GCWU000342_01670 [Shuttleworthia satelles DSM
           14600]
 gi|229791562|gb|EEP27676.1| hypothetical protein GCWU000342_01670 [Shuttleworthia satelles DSM
           14600]
          Length = 244

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 27/242 (11%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL-SLFATRLSRH--FHEKTGKALPLLY--- 223
           F+N+         +    +I VF+ ++GI+L +L AT  S      E+ G+     Y   
Sbjct: 16  FINDNRWQSLVSGLGVTLQITVFAVIVGILLGALVATVRSTWDKSGEEMGRRKSPAYYLL 75

Query: 224 --------ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
                   I   +I G P +V + + Y + F             +T          A   
Sbjct: 76  KGFNVICKIYLTVIRGTPVVVQLMISYFIIF-------------ATSKNAVAVAIFAFGL 122

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            +AA++AEI+R G++++  GQ EA  +LG  + +    ++LPQ  ++++P L ++++ L+
Sbjct: 123 NSAAYVAEIIRGGIMSIDEGQFEAGRSLGFNYPQTMIYIILPQVFKAVLPALLNEFITLV 182

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K +S+A  VG  DL   G  I ++T  A   +     IYL + I++     RL  ++   
Sbjct: 183 KETSVAGYVGIMDLTKAGDVIRSRTYSAFMPLFAVAGIYLVIVIILETVFGRLERRLRQN 242

Query: 396 EK 397
           E+
Sbjct: 243 ER 244


>gi|49476851|ref|YP_034899.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|196035738|ref|ZP_03103141.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|228932068|ref|ZP_04094960.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228944393|ref|ZP_04106766.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|49328407|gb|AAT59053.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|195991705|gb|EDX55670.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|228815295|gb|EEM61543.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228827651|gb|EEM73393.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
          Length = 218

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/220 (31%), Positives = 121/220 (55%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG+VL++      R           L ++ T L+  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRI----------LNWLGTALVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+    VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRILNWLGTALVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|261251727|ref|ZP_05944301.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260938600|gb|EEX94588.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 263

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+ +    G +     L    +T+  +A    F+ ++G+  +       
Sbjct: 32  MGYQWQWERVPDYILFFEDGEWWPAELLDGLVVTIKISALSLCFTLLIGLTTAAL----- 86

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +      G+ +  LYI   +I   P LV I + Y +             G       F +
Sbjct: 87  KLSDSWVGRGIANLYIE--VIRNTPLLVQIYVLYFVF------------GPVIGLDRFAT 132

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AEI R GL ++P+ Q EAA +LGL        V+LPQ ++  +PPLT
Sbjct: 133 AVLALSLFQGAYTAEIFRGGLNSIPKEQFEAAKSLGLNPFYTFYDVILPQLLQRTLPPLT 192

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYLSL++M++     +
Sbjct: 193 NEVISLIKNSSIVSVMAIFDLTTEGRNIVSETAMPFEIWFTVAAIYLSLTLMLSGVSVWM 252

Query: 389 NAKIALKEK 397
             K+    +
Sbjct: 253 EHKLGASWR 261



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 77  VPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           + +  D  +  A +L G V T  ++   +    +IG    A +LS + +   I  +Y+EV
Sbjct: 45  ILFFEDGEWWPAELLDGLVVTIKISALSLCFTLLIGLTTAALKLSDSWVGRGIANLYIEV 104

Query: 136 FRNIPPLVVIFFLYKSV 152
            RN P LV I+ LY   
Sbjct: 105 IRNTPLLVQIYVLYFVF 121


>gi|227534279|ref|ZP_03964328.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227188071|gb|EEI68138.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 237

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 5/210 (2%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      F    ++ ++ +L    + + F     K     Y+  F     P LV + +
Sbjct: 19  YTIPIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLF--RSTPLLVQLFI 76

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +   F  P L               ++  I  S  T A+ AE +R+ L+++  GQ EAA
Sbjct: 77  VF---FGLPSLIIPGIFPHGIKLDPVVAGIITFSLNTGAYCAETIRAALLSIDHGQWEAA 133

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++GL  R   R +++PQA+R+ +PPL++ +++L+K++SLA ++   ++  V   I  + 
Sbjct: 134 YSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQVSQQIAAEN 193

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            Q + +  +   +Y  +  ++      L  
Sbjct: 194 YQPLLMYSLVALLYAVVCTVLTWGQRYLEK 223


>gi|307704889|ref|ZP_07641780.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|307621503|gb|EFO00549.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 227

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTVLISICVVFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQVGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +     ++   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKRMGQGDKK 227



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 37/97 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTVLISICVVFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           I   +  +    P     I+      L    L     
Sbjct: 69  IMIAFALMHINAPTIQVGILGVDFSRLIPGILIISMN 105


>gi|300858345|ref|YP_003783328.1| hypothetical protein cpfrc_00927 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685799|gb|ADK28721.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206063|gb|ADL10405.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Corynebacterium pseudotuberculosis C231]
 gi|302330613|gb|ADL20807.1| Putative ABC transport system membrane protein [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276299|gb|ADO26198.1| Putative ABC transport system membrane protein [Corynebacterium
           pseudotuberculosis I19]
          Length = 318

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 11/261 (4%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+++ FL+  + +              +F     L+           I + S +LG+VL
Sbjct: 24  ILILLVFLWFIISAATNKAYGWDTYIQYLFDTRIALAAGHT-----LAITILSMILGVVL 78

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIG 258
              A  + R       + +   Y+  F   G P  V +     L   +    LG      
Sbjct: 79  G-CAVAVMRMSPNPVLRIVSWFYLWIF--RGTPVYVQLVFWGLLGSLYQTINLGFTEISL 135

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
              +S  F+   + L    AA++AEIVRSGL AVP GQ EA+ ALG++     R  +LPQ
Sbjct: 136 EKALSNMFLLAVLGLGLNEAAYMAEIVRSGLQAVPEGQTEASKALGMSWWMTIRRTVLPQ 195

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           AMR I+PP  +++++LLK +SL VA+ + A+L      I       + ++L+    YL +
Sbjct: 196 AMRIIVPPTGNEFISLLKTTSLVVAIPYTAELYGRATDIAAALFDPVPLLLVAATWYLVI 255

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           + ++ +  + L         +
Sbjct: 256 TSLLMIAQSYLEKYFDRGATR 276



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 21/118 (17%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           + A+L+ ++FLW + +   N      + G                + Y  D+  A A   
Sbjct: 21  VAAILILLVFLWFIISAATN-----KAYGWD------------TYIQYLFDTRIALAA-- 61

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
              +T  +    MI   ++G  V   R+S N ++  +   Y+ +FR  P  V + F  
Sbjct: 62  --GHTLAITILSMILGVVLGCAVAVMRMSPNPVLRIVSWFYLWIFRGTPVYVQLVFWG 117


>gi|222082566|ref|YP_002541931.1| glutamine ABC transporter [Agrobacterium radiobacter K84]
 gi|221727245|gb|ACM30334.1| glutamine ABC transporter [Agrobacterium radiobacter K84]
          Length = 510

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 22/218 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   ++G+VL++     SR              I T +  GLP +V I +  Q 
Sbjct: 39  LAAASTVLGVIIGMVLAVMGISQSRWLRLPA-------RIYTDIFRGLPAIVTILIIGQ- 90

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  F    IALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 91  --------GFARIGRELFGPSPFPLGIIALSLIAGAYIGEIFRSGIQSVERGQMEACRAL 142

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            +++ +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 143 SMSYGQGMRLIVIPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 202

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG  +  +L+    YL +++ +  F+N ++A++ L  +
Sbjct: 203 TGN-LSPLLLAGVFYLLITVPLTHFVNYIDARLRLGRQ 239



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I VG  NT  LA +  +   IIG ++    +S ++ +    R+Y ++FR +P +V I  +
Sbjct: 29  ITVGLKNTLILAAASTVLGVIIGMVLAVMGISQSRWLRLPARIYTDIFRGLPAIVTILII 88

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            +    +          P G+ 
Sbjct: 89  GQGFARIGRELFGPSPFPLGII 110


>gi|323490820|ref|ZP_08096021.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
 gi|323395532|gb|EGA88377.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
          Length = 219

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + F    +    K   F+ +LG +L      L +    K  +     Y 
Sbjct: 1   MNLDFSQIVPYIPFMLEGIWATLKFVFFAIILGSILGTLL-ALFKIGSIKPLRWFADAYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + + Y   F  P L  ++          F+S  +A    ++A+I+EI
Sbjct: 60  SIF--RGTPLILQLMIIY---FSTPQLTGYDI-------SAFLSAILAFGLNSSAYISEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQMEAA ALG+ +R   + ++LPQA+++I+P L ++++ L K S++   +
Sbjct: 108 IRAGIQAVDKGQMEAAQALGVPYRAMMKDIILPQALKNILPALMNEFITLTKESAIVSTI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G+ DL+     +     +  E +L   FIY  L + + +       ++   +
Sbjct: 168 GYLDLMRRAQVVGADLFRNFEPLLFVGFIYWCLVMGLTMIGRVFERRLKQSD 219



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   +L G   T    F  +I  +I+GTL+   ++ + K + W    Y  +F
Sbjct: 3   LDFSQIVPYIPFMLEGIWATLKFVFFAIILGSILGTLLALFKIGSIKPLRWFADAYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y S   +
Sbjct: 63  RGTPLILQLMIIYFSTPQL 81


>gi|121608947|ref|YP_996754.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553587|gb|ABM57736.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 291

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 109/214 (50%), Gaps = 5/214 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + +  LG+VL +  T + R         +   Y+  F   G P ++ + L + L  
Sbjct: 76  VVMSILAMALGVVLGVV-TAVMRVSSNPVLGWVARTYVWLF--RGTPVILQLLLWFNLAL 132

Query: 247 DKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P L       +    V   F++  + L     A+ +E+VR+GL++V  GQ EAA ++G
Sbjct: 133 VLPTLGIPGVWEVRTVDVMSPFLAALLGLGINQGAYTSEVVRAGLLSVDAGQYEAAKSIG 192

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +    A R V+LPQAMR IIPP+ ++++ ++K +SLA  + +A+++     I     + I
Sbjct: 193 MPRMLALRRVILPQAMRVIIPPIGNEFVGMIKLTSLASVIQYAEILHNAQNIYYANARVI 252

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E++++    Y+++  ++AL  +R+ +  A    +
Sbjct: 253 ELLIVAGIWYIAVVTVLALLQSRVESHFARGAGR 286



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 32/62 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G VNT  ++   M    ++G +    R+S+N ++ W+ R YV +FR  P ++ +   +  
Sbjct: 71  GLVNTVVMSILAMALGVVLGVVTAVMRVSSNPVLGWVARTYVWLFRGTPVILQLLLWFNL 130

Query: 152 VL 153
            L
Sbjct: 131 AL 132


>gi|229015971|ref|ZP_04172932.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1273]
 gi|229022188|ref|ZP_04178738.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1272]
 gi|228739119|gb|EEL89565.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1272]
 gi|228745331|gb|EEL95372.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1273]
          Length = 218

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++ T  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWLGTAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  +AL+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITFNGFVAGTVALTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|330950140|gb|EGH50400.1| amino acid ABC transporter ATP-binding protein [Pseudomonas
           syringae Cit 7]
          Length = 403

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 14/239 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                   F +F            +  +   +     LG +L+      +R       + 
Sbjct: 1   MAFEWAYFFSLFSVQAFWKACLTVVQLSVLSWTAGLALGFLLA-----SARLSTHAWLRV 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              LYI  F    +P LVL+   Y L        Q      S +S  F S  IAL     
Sbjct: 56  PASLYIWLF--RSIPLLVLLVFVYNLP-------QLFPASSSVLSQPFYSGLIALVLTET 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEI R GL++V +GQ EAA ALG+    A RLV++PQA+R  +P LT++Y+ ++K +
Sbjct: 107 AYMAEIHRGGLLSVLKGQREAARALGIRGLGAQRLVVIPQAIRISLPTLTNEYVTIVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL   +   +L+ VG  +  Q    +E +      Y+ +  +    +      + L  K
Sbjct: 167 SLVSVISLNELLLVGQRLYAQNFLVLETLAAVAMYYVLIVTLFGWLLQWAERHLDLSRK 225



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 74/199 (37%), Gaps = 11/199 (5%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A     +    L+         +G L+ + RLS +  +     +Y+ +FR+IP LV++ 
Sbjct: 15  QAFWKACLTVVQLSVLSWTAGLALGFLLASARLSTHAWLRVPASLYIWLFRSIPLLVLLV 74

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF--------VLGI 198
           F+Y  +  + P     +  PF   L    L+      + +    +            LGI
Sbjct: 75  FVYN-LPQLFPASSSVLSQPFYSGLIALVLTETAYMAEIHRGGLLSVLKGQREAARALGI 133

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
              L A RL     +    +LP L      I  L +LV +    +L      L   NF+ 
Sbjct: 134 -RGLGAQRLV-VIPQAIRISLPTLTNEYVTIVKLTSLVSVISLNELLLVGQRLYAQNFLV 191

Query: 259 GSTVSPEFMSLYIALSCYT 277
             T++   M   + ++ + 
Sbjct: 192 LETLAAVAMYYVLIVTLFG 210


>gi|167563744|ref|ZP_02356660.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia oklahomensis EO147]
          Length = 219

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAVLTLKFAVASMVLGLIVGLVV-AIVRIGNNRILSAVAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G ++ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDI----------GISLDPT-SAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A + M+   I+G +V   R+  N++++ + + YV + R  P LV +F 
Sbjct: 13  VLAKGAVLTLKFAVASMVLGLIVGLVVAIVRIGNNRILSAVAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDIGISLDPTSAGIFTLTLN 97


>gi|113869257|ref|YP_727746.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113528033|emb|CAJ94378.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 217

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 12/213 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F  +  L + L L    L+R         L   YI  +L+ G P ++ +   Y 
Sbjct: 16  QVTLTLFAITLALSVPLGLAL-ALARISSWPWLSGLVNGYI--WLMRGTPLMLQMLFIYF 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ EA+ AL
Sbjct: 73  ALPFVPVI--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKAL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R V+LPQ +  ++PP++++ + L+K++SL   +   D++     I+ +    
Sbjct: 125 GMTYFQTMRRVVLPQMVSRVLPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDF-T 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               L+    YL +++++  F   L  + A  +
Sbjct: 184 TTPFLVAALFYLVMTLILTWFFQNLEKRYAKHD 216



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    +  +  +G  +   R+S+   ++ +   Y+ + R  P ++ + F+
Sbjct: 11  LAQGAQVTLTLFAITLALSVPLGLALALARISSWPWLSGLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|91778080|ref|YP_553288.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91690740|gb|ABE33938.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 222

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 104/218 (47%), Gaps = 13/218 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                       ++   S  L  VL L             G+  P       +++G  T 
Sbjct: 12  WPDIMRGTLVTVEVTAASLALSCVLGLLIG---------IGRLTPKRR----MVYGFCTA 58

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L   +      +  L  F       + P F+   + L  Y+AA+++EIVR  + +V RG
Sbjct: 59  YLTFFRGTPLLVQLFLLFFGLPQFGILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSVDRG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G++  +A R ++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  
Sbjct: 119 QMEAARSIGMSAGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQK 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+ + +++E+ L    +YL L+      ++R+  ++ 
Sbjct: 179 IISVSYRSLEVYLAIALVYLVLTQATNYALHRVERRLR 216


>gi|187919126|ref|YP_001888157.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717564|gb|ACD18787.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 222

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 17/221 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T++  A     S VLG+++ +             G+  P   I    ++G 
Sbjct: 13  PDILHGAVVTVEVTAASLALSCVLGLLIGI-------------GRLTPKRRI----VYGF 55

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            T  L   +      +  L  F       + P F+   + L  Y+AA+++EIVR  + +V
Sbjct: 56  CTAYLTFFRGTPLLVQLFLLFFGLPQFGILLPAFVCGMLGLGLYSAAYVSEIVRGAIQSV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQMEAA ++G++  +A R ++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  
Sbjct: 116 DRGQMEAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHE 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  II+ + +++E+ L    +YL L+      ++R+   + 
Sbjct: 176 GQKIISVSYRSLEVYLAIALVYLVLTQATNYALHRVERHLR 216


>gi|17231657|ref|NP_488205.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC
           7120]
 gi|17133300|dbj|BAB75864.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC
           7120]
          Length = 308

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/183 (32%), Positives = 92/183 (50%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            +  F  D R   I+ Q+I   L   +    + N+  N+++  +  G  FL ++A F+I 
Sbjct: 4   EKPPFWRDNRFWYIAGQLIALFLAAFVVAILLGNLNRNLQRLGIQFGFDFLKQQASFDIG 63

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++ Y    +Y+ A+ VG +N+  +AF G+I  TI+G L G  RLS N LV  I  VYV
Sbjct: 64  ETLIAYKPTDTYSLALWVGLINSLRIAFVGIILTTIVGILAGIARLSDNWLVRNISLVYV 123

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRN P L+ + F Y +V   LP  D+ I L   + L+  GL  P  T        +  
Sbjct: 124 EIFRNTPLLLQLLFWYFAVFLGLPRADNKISLGGFIGLSQNGLELPWFTFSPEFSALLLG 183

Query: 194 FVL 196
            + 
Sbjct: 184 LIF 186



 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 89/224 (39%), Positives = 126/224 (56%), Gaps = 15/224 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I     +L  ++ + A  ++R       + + L+Y+  F    L  L L+   + +  
Sbjct: 87  LRIAFVGIILTTIVGILAG-IARLSDNWLVRNISLVYVEIFRNTPL-LLQLLFWYFAVFL 144

Query: 247 DKPVLGQFNFIGGS-------------TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             P       +GG              T SPEF +L + L  YT AFIAEIVR G+ +V 
Sbjct: 145 GLPRADNKISLGGFIGLSQNGLELPWFTFSPEFSALLLGLIFYTGAFIAEIVRGGIQSVS 204

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA  +LGL      RLV+ PQA+R IIPPLTSQYLNL KNSSLA+A+G+ D+  V 
Sbjct: 205 KGQWEAGRSLGLNPSLIMRLVIFPQALRVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVA 264

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            T  NQTG+A+E++L+ M  YLSLS+ I+L MN  N  + +KE+
Sbjct: 265 STTFNQTGKAVEVMLLLMLTYLSLSLTISLIMNAFNRTVQIKER 308


>gi|327191793|gb|EGE58795.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CNPAF512]
          Length = 226

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G++L L  T ++R F       +   Y+  ++I G P LV + 
Sbjct: 17  WAGLVFTIPLTLLSFTFGLILGLV-TAIARLFGPAPVVVVARFYV--WVIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  VIFY-----------GLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL LS +++    RL  + A  
Sbjct: 183 TYEPLILYIEAALIYLVLSSILSQLQVRLERRFARY 218



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L         I+G +    RL     V  + R YV V R  P LV +F +
Sbjct: 16  LWAGLVFTIPLTLLSFTFGLILGLVTAIARLFGPAPVVVVARFYVWVIRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 76  FYGLPSIGILLDAFPAALIGFTLN 99


>gi|170758808|ref|YP_001786563.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169405797|gb|ACA54208.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 222

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 11/213 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                   I + S ++ ++  +    + R +  K   ++  +YIS F   G P L+ + L
Sbjct: 18  KYAHITLSIAILSMIIAVLFGVIL-AVIRMYKVKVLHSISEIYISFF--RGTPILIQLFL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P +     I      P +M++ IALS   +A++AEI+R  ++++ +GQMEA+
Sbjct: 75  FY---YGLPQI-----IPSFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSIDKGQMEAS 126

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           ++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG A+++S        +
Sbjct: 127 LSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILSKAQMNAASS 186

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  E  L    IY  +  +       L  KI 
Sbjct: 187 YRFFESYLAVALIYWVMVELFNFMQKLLERKIG 219



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A   MI A + G ++   R+   K++  I  +Y+  FR  P L+ +F  Y  +  +
Sbjct: 23  TLSIAILSMIIAVLFGVILAVIRMYKVKVLHSISEIYISFFRGTPILIQLFLFYYGLPQI 82

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +P           +   +   S     +   A + +
Sbjct: 83  IPSFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSI 118


>gi|169334791|ref|ZP_02861984.1| hypothetical protein ANASTE_01197 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257529|gb|EDS71495.1| hypothetical protein ANASTE_01197 [Anaerofustis stercorihominis DSM
           17244]
          Length = 222

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 8/209 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I + S ++   L LF+  +      K  KA+   Y   +LI G P LV     Y  
Sbjct: 20  MTVQITIISLIIAFFLGLFSCVMG-ISSFKPFKAISKFY--LWLIRGTPLLVQCFFVY-- 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L Q    G       + +  I LS    A+++EI R G+ AV +GQMEAA +LG
Sbjct: 75  -FGLPQLIQ--SFGIDFRLTAYSAGIITLSLNAGAYMSEIFRGGIQAVDKGQMEAARSLG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +A   V+LPQA++  IP L +Q++  LK++S+   +  A++V      I +T  + 
Sbjct: 132 LPKGRAMIKVILPQALKICIPSLVNQFIITLKDTSIISTISLAEVVYAANIYIGRTMNSF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               +   +YL +  +++   N +  +I+
Sbjct: 192 ATWTLVGLMYLVVVTLLSSLSNYIERRIS 220



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I A  +G       +S+ K    I + Y+ + R  P LV  FF+
Sbjct: 14  LLEGLAMTVQITIISLIIAFFLGLFSCVMGISSFKPFKAISKFYLWLIRGTPLLVQCFFV 73

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 74  YFGLPQL 80


>gi|296535859|ref|ZP_06898018.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296263809|gb|EFH10275.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 220

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 15/235 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F +  + R L    L +       +   +LG+ + LF+  L R       +    
Sbjct: 1   MYNWDFAVVWSYRWLFVNGLWVTLAFTAAIV--LLGLAVGLFSGLL-RLSRLAPLRWFSQ 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F     P LV +      ++  P+L                +  +ALS Y  AF 
Sbjct: 58  AYVELF--RCTPILVQLV---WFYYALPILTG-------IQMSATTAGVLALSLYGGAFY 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR G+ ++  GQ EAA+ALG+T  ++ R ++LPQAM+ ++PPL +Q +  LKN+SL 
Sbjct: 106 SEIVRGGIASIESGQSEAALALGMTPAQSMRRIVLPQAMKRMVPPLMNQSIIQLKNTSLV 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   DL+  G    + + + +EI  +   IY  +   + L + RL  ++A  +
Sbjct: 166 SVLAVPDLLYQGQAAAHDSYRPLEIYTVVAIIYFVVLFPLTLLVGRLERRLARSD 220



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 32/76 (42%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    SY    + G   T     + ++    +G   G  RLS    + W  + YVE+FR
Sbjct: 5   DFAVVWSYRWLFVNGLWVTLAFTAAIVLLGLAVGLFSGLLRLSRLAPLRWFSQAYVELFR 64

Query: 138 NIPPLVVIFFLYKSVL 153
             P LV + + Y ++ 
Sbjct: 65  CTPILVQLVWFYYALP 80


>gi|27382316|ref|NP_773845.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355487|dbj|BAC52470.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 303

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 112/263 (42%), Gaps = 10/263 (3%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR +   +++  L  +++                      L     TM       +   
Sbjct: 43  WFRWLSAALIVLVLA-AIVRAFANGQIEWSYVSRFLTVKVILEGIVNTMVMAVLAMMLGI 101

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--G 252
            LGIV+++      R       K +   Y   F   G P ++ + L + L    P +   
Sbjct: 102 FLGIVVAIM-----RLSPNPVLKTVAAGYTWLF--RGTPLILQLLLWFNLALVFPTIGIP 154

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V   F++  + L     A+ +E++R+G+++V  GQ EAA A+G+   +A R
Sbjct: 155 GLWSARAVDVMTPFLAALLGLGINQGAYTSEVMRAGMLSVDIGQYEAAQAIGMGRLRALR 214

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQAMR +IPPL ++++ ++K +SLA  + + +L+     I     + IE++++   
Sbjct: 215 RIVLPQAMRVVIPPLGNEFIGMVKATSLASVIQYPELLHNAENIYYANSRVIELLIVAGL 274

Query: 373 IYLSLSIMIALFMNRLNAKIALK 395
            YL +  ++      L  + A  
Sbjct: 275 WYLLVVSILTPLQMLLERRFARG 297



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             IL G VNT  +A   M+    +G +V   RLS N ++  +   Y  +FR  P ++ + 
Sbjct: 80  KVILEGIVNTMVMAVLAMMLGIFLGIVVAIMRLSPNPVLKTVAAGYTWLFRGTPLILQLL 139

Query: 147 FLYKSVL 153
             +   L
Sbjct: 140 LWFNLAL 146


>gi|167582028|ref|ZP_02374902.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167620193|ref|ZP_02388824.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257139261|ref|ZP_05587523.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 219

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L           K  V S + G+V ++    L      +    L   Y+S  ++ G P
Sbjct: 9   QSLPVLLQGALLTVKFAVLSMLFGLVGAVVL-ALMGIGGSRVLAGLARAYVS--VMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + 
Sbjct: 66  LLVQIFVIY---YGLPSL-------GVSLDPT-PAGVIALSANVAAYMSESMRGAINGIE 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ  AA +LGL+ R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 115 KGQWLAAYSLGLSWRQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSA 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             II  T Q + + L    +Y  L  ++         ++AL  + 
Sbjct: 175 QEIIASTYQPLPLYLAAAGVYWVLCQILEWVQRWYERRLALPSRH 219



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T   A   M+   +   ++    +  ++++A + R YV V R  P LV IF 
Sbjct: 13  VLLQGALLTVKFAVLSMLFGLVGAVVLALMGIGGSRVLAGLARAYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSV 155
           +Y  + S+
Sbjct: 73  IYYGLPSL 80


>gi|116334343|ref|YP_795870.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099690|gb|ABJ64839.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 212

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 18/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+  +    +FS ++G   +L     S     K G+ +  +YI  F       L
Sbjct: 13  LYGLGQTLLCSLLALIFSLIIGTFFALLEESPS-----KFGRGVARVYIEIFRNIP---L 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I + + + F   V+              F +  I L+ YT+AFIAE VR+G+ +V  G
Sbjct: 65  LVITMFFYVVFPLYVIK----------MNGFTAGTIGLTLYTSAFIAETVRAGIQSVDPG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A A GL+  +A R ++LPQA R +IPPL +Q++NL+KNSS    VG  DL+  G  
Sbjct: 115 QMEGARANGLSFWQAMRYIVLPQAFRYVIPPLGNQFVNLVKNSSTLAFVGGFDLMYQGNV 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I + + + I        +YL +++ I+ +M  L  ++A
Sbjct: 175 IASSSLETIAAYSAVGVLYLVITMPISYYMRYLEKRLA 212



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 39/94 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y   +L G   T   +   +I + IIGT       S +K    + RVY+E+FRNIP L
Sbjct: 6   QTYGGTLLYGLGQTLLCSLLALIFSLIIGTFFALLEESPSKFGRGVARVYIEIFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           V+  F Y      +   +       G+ L     
Sbjct: 66  VITMFFYVVFPLYVIKMNGFTAGTIGLTLYTSAF 99


>gi|51596054|ref|YP_070245.1| amino-acid ABC transporter (permease) [Yersinia pseudotuberculosis
           IP 32953]
 gi|153950219|ref|YP_001401242.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|186895160|ref|YP_001872272.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|51589336|emb|CAH20958.1| putative amino-acid ABC transporter (permease) [Yersinia
           pseudotuberculosis IP 32953]
 gi|152961714|gb|ABS49175.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|186698186|gb|ACC88815.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 220

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 13/193 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            + R  H      +   Y+S F   G P +  + + Y        L QF           
Sbjct: 41  AMMRLSHFWPFSLISRFYVSIF--RGTPLIAQLFMIYY------GLPQFG-----IELDP 87

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +A   V+LPQA R+ +P
Sbjct: 88  MPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + ++ L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   
Sbjct: 148 PLGNSFIGLVKDTSLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQ 207

Query: 386 NRLNAKIALKEKK 398
           NRL A +  ++++
Sbjct: 208 NRLEAHVNRQDQE 220



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS     + I R YV +FR  P +  +F +
Sbjct: 15  LLKGAWLTLQLSLGGMFLGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPMPAALIGLSLN 98


>gi|167587290|ref|ZP_02379678.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 231

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 20/219 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR-------HFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
               VF  +  +VL++   R S             T  AL   Y+S  ++ G P LV I 
Sbjct: 26  VLSMVFGLMGAVVLAMMGIRQSDGITSGFERVVVNTLAALARAYVS--VMRGTPLLVQIF 83

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  A
Sbjct: 84  VIY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIHRGQWLA 132

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  
Sbjct: 133 AYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAA 192

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T Q + + L    +Y  L  ++         +++L  + 
Sbjct: 193 TYQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPARH 231


>gi|153938371|ref|YP_001390528.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|170756986|ref|YP_001780803.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|152934267|gb|ABS39765.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|169122198|gb|ACA46034.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
 gi|295318609|gb|ADF98986.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 222

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 11/220 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L            I + S ++ ++  +    + R +  K   ++  +YIS F   G P
Sbjct: 11  QSLIVLLKYAHITLSIAILSMIIAVLFGVIL-AVIRMYKVKVLHSISEIYISFF--RGTP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ + L Y   +  P +     I      P +M++ IALS   +A++AEI+R  ++++ 
Sbjct: 68  ILIQLFLFY---YGLPQI-----IPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSID 119

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEA+++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG A+++S  
Sbjct: 120 KGQMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGVAEILSKA 179

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 + +  E  L    IY  +  +       L  KI 
Sbjct: 180 QMNAASSYRFFESYLAVALIYWVMVELFNFMQKLLERKIG 219



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A   MI A + G ++   R+   K++  I  +Y+  FR  P L+ +F  Y  +  +
Sbjct: 23  TLSIAILSMIIAVLFGVILAVIRMYKVKVLHSISEIYISFFRGTPILIQLFLFYYGLPQI 82

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +P           +   +   S     +   A + +
Sbjct: 83  IPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSI 118


>gi|229089703|ref|ZP_04220964.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-42]
 gi|228693602|gb|EEL47304.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-42]
          Length = 218

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG+VL++      R           L ++ T  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRI----------LNWLGTAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+++A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYKQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGVDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 36/69 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVLSVLP 157
           Y ++  V  
Sbjct: 74  YFALPVVGI 82


>gi|194290844|ref|YP_002006751.1| binding-protein-dependent transporter inner membrane component
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224679|emb|CAQ70690.1| putative Binding-protein-dependent transporter, inner membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 217

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 12/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +F  +  L + L L    L+R         L   YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLTLFAITLALSVPLGLAL-ALARISSWPLLSGLVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ EA+ ALG
Sbjct: 74  LPFVPVI--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  R V+LPQ +  ++PP++++ + L+K++SL   +   D++     I+ +     
Sbjct: 126 MTYFQTMRRVVLPQMVSRVLPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              L+    YL +++++  F   L  + A  +
Sbjct: 185 TPFLVAALFYLVMTLILTWFFQNLEKRYAKHD 216



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    +  +  +G  +   R+S+  L++ +   Y+ + R  P ++ + F+
Sbjct: 11  LAQGAKVTLTLFAITLALSVPLGLALALARISSWPLLSGLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|309781434|ref|ZP_07676170.1| glutamine ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308919847|gb|EFP65508.1| glutamine ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 222

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 13/218 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
             G +          ++   + VLG +L L       +   +    +  +Y++      L
Sbjct: 9   WAGWTDILRGALVTVEVTAAALVLGCMLGLLIGIGRLNPRRRFIYGICTVYVTFIRGTPL 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
              + +       FD              + P F+   + L  Y+ A+++EIVR  + +V
Sbjct: 69  LVQLFLLFFGLPQFD-------------ILLPAFVCGVLGLGVYSGAYVSEIVRGAIQSV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQMEAA ++G++  ++ R ++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  
Sbjct: 116 DRGQMEAARSIGMSSAQSMRAIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHE 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G  II+ + +++E+ L    +YL L+   +  ++RL  
Sbjct: 176 GQKIISVSYRSLEVYLAIALVYLVLTSAASYLLHRLER 213



 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-ANKLVAWICRVYVEV 135
           + ++   +  T IL G + T  +  + ++   ++G L+G GRL+   + +  IC VYV  
Sbjct: 3   LDFSPVWAGWTDILRGALVTVEVTAAALVLGCMLGLLIGIGRLNPRRRFIYGICTVYVTF 62

Query: 136 FRNI 139
            R  
Sbjct: 63  IRGT 66


>gi|254523655|ref|ZP_05135710.1| ABC transporter, nucleotide binding/ATPase protein
           [Stenotrophomonas sp. SKA14]
 gi|219721246|gb|EED39771.1| ABC transporter, nucleotide binding/ATPase protein
           [Stenotrophomonas sp. SKA14]
          Length = 581

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 11/249 (4%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SVL  P          F     L     T+   A      F LG +L+L     +R    
Sbjct: 48  SVLGNPRWGWGAFAEWFFARPVLEGLGRTLLLTALGTGLGFALGTLLAL-----ARVSGS 102

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGST-VSPEFM 267
               A+   Y+  F    L  L+L+          +    P  G   F   +T +   F 
Sbjct: 103 PLLSAVSWGYVWLFRSIPLLVLLLLLNNLGYLYSTIELGVPFTGISLFSYPTTQLIGVFT 162

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+   AAF AE++R G+++V  GQ EAA ALGL   +  R ++LPQAMRSI+P  
Sbjct: 163 AAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRRIILPQAMRSILPAA 222

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  + L K++S+   +   +L      I  +  + + ++++    YL +  +++L   R
Sbjct: 223 FNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLLQRR 282

Query: 388 LNAKIALKE 396
           +  + A  +
Sbjct: 283 VEQRFARGQ 291



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++  +A  +L G   T  L   G      +GTL+   R+S + L++ +   YV +FR+IP
Sbjct: 61  AEWFFARPVLEGLGRTLLLTALGTGLGFALGTLLALARVSGSPLLSAVSWGYVWLFRSIP 120


>gi|229168897|ref|ZP_04296614.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH621]
 gi|228614489|gb|EEK71597.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH621]
          Length = 219

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           I T +  G 
Sbjct: 13  PYILKGLEVTLKIVAASALAGFILGTLLALCKIARIRALNIAA-------DIYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQMIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  + ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGIPYGKMMKNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 219



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +  +  +   I+GTL+   +++  + +     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAASALAGFILGTLLALCKIARIRALNIAADIYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQM 81


>gi|254471270|ref|ZP_05084672.1| amino acid ABC transporter, permease protein [Pseudovibrio sp.
           JE062]
 gi|211959416|gb|EEA94614.1| amino acid ABC transporter, permease protein [Pseudovibrio sp.
           JE062]
          Length = 319

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 80/313 (25%), Positives = 137/313 (43%), Gaps = 17/313 (5%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVG--AGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            +L   +  F L+  G   +T++   V      + A   ++ +    V     +P  V +
Sbjct: 20  VVLAALLMAFDLSSVGQYLSTLLNLDVAPDTASVLAAFAISAVITADVVFVSKLPMKVQV 79

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
              +  +L++     +S  L F   +    +        T    F  S +   +L+ F  
Sbjct: 80  PIYWAQLLALFLGFFYSFDLSFPFIIERLPILLYKGLFYTLFVSFA-SIIFASILA-FVG 137

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R  +     A+   Y+S F   G P L+ + L Y      P L              
Sbjct: 138 ALMRLSNSGPAYAISTFYVSFF--RGTPLLLQVYLIY---LGLPQL--------GITLDA 184

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             S  +ALS    A++ EI R+G+ AVPR Q EAA ALGL   +    V+LPQA+R IIP
Sbjct: 185 IPSGILALSLSYGAYMTEIFRAGIQAVPREQSEAAAALGLQPWQTMWKVVLPQAIRIIIP 244

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  + ++++LK+SSL  A+G  +L+ +  T+     +  E+++    IY ++S +  +  
Sbjct: 245 PTGNNFISMLKDSSLVSAMGIMELMYLARTLGRSEFKHFEMLISAALIYWAVSFVFEMIQ 304

Query: 386 NRLNAKIALKEKK 398
            RL  + A  +K+
Sbjct: 305 ARLEKRFATSQKR 317


>gi|254250433|ref|ZP_04943752.1| phosphate ABC transporter, ATP-binding protein pstB [Burkholderia
           cenocepacia PC184]
 gi|124879567|gb|EAY66923.1| phosphate ABC transporter, ATP-binding protein pstB [Burkholderia
           cenocepacia PC184]
          Length = 604

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 1/255 (0%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  +   + SVL  P     +    F +   L+    T+   A   V  F L I L+L  
Sbjct: 47  IVLIAAVLYSVLGNPRWGWNVFAHWFFSEAVLAGLGQTLLLTALGAVLGFALAIPLALAR 106

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VS 263
              S      +   + L      ++  L    L  L   +    P        G +T + 
Sbjct: 107 LSRSPLLSSCSWAYIWLFRSIPTIVLLLLLNNLGYLYDTVRLGVPFTDIVFLRGPTTDLI 166

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             FM+  + L+   AAF AE +R G+++V  GQ EAA ALGL   + T  ++LPQAMR+I
Sbjct: 167 TPFMAAILGLTLTQAAFAAEAIRGGILSVDHGQREAAAALGLPRARQTWRIVLPQAMRAI 226

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   +  + L K +++   +   DL      I ++  + I ++++    YL +  +++ 
Sbjct: 227 LPAAFNDVIGLAKGTAVVYILAMPDLFYTVQIIYHRNLEVIPMLMVATVWYLVILTVLSA 286

Query: 384 FMNRLNAKIALKEKK 398
               +    A    +
Sbjct: 287 IQVHIERHYARGATR 301



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 6/109 (5%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L   G +    +   +   RLS + L++     Y+ +FR+IP +V    
Sbjct: 76  AVLAGLGQTLLLTALGAVLGFALAIPLALARLSRSPLLSSCSWAYIWLFRSIPTIV---- 131

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
               +L       +  V     F +   L  PT  + T     +    L
Sbjct: 132 --LLLLLNNLGYLYDTVRLGVPFTDIVFLRGPTTDLITPFMAAILGLTL 178


>gi|148379165|ref|YP_001253706.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932298|ref|YP_001383541.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153936492|ref|YP_001387090.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. Hall]
 gi|168178599|ref|ZP_02613263.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226948447|ref|YP_002803538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
 gi|148288649|emb|CAL82730.1| putative cystine ABC transporter, permease protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928342|gb|ABS33842.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152932406|gb|ABS37905.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. Hall]
 gi|182670787|gb|EDT82761.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226842057|gb|ACO84723.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
 gi|322805500|emb|CBZ03064.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           H04402 065]
          Length = 222

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 11/220 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L            I + S ++ ++  +    + R +  K   ++  +YIS F   G P
Sbjct: 11  QSLIVLLKYAHITLSIAILSMIIAVLFGVIL-AVIRMYKVKVLHSISEIYISFF--RGTP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ + L Y   +  P +     I      P +M++ IALS   +A++AEI+R  ++++ 
Sbjct: 68  ILIQLFLFY---YGLPQI-----IPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSID 119

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEA+++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG A+++S  
Sbjct: 120 KGQMEASLSLGMTEFQAMKRIILPQAARIAIPSLGNSFIDLLKSSSLAFTVGVAEILSKA 179

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 + +  E  L    IY  +  +       L  KI 
Sbjct: 180 QMNAASSYRFFESYLAVALIYWVMVELFNFMQKLLERKIG 219



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A   MI A + G ++   R+   K++  I  +Y+  FR  P L+ +F  Y  +  +
Sbjct: 23  TLSIAILSMIIAVLFGVILAVIRMYKVKVLHSISEIYISFFRGTPILIQLFLFYYGLPQI 82

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +P           +   +   S     +   A + +
Sbjct: 83  IPAFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSI 118


>gi|15967001|ref|NP_387354.1| putative amino-acid transport system permease ABC transporter
           protein [Sinorhizobium meliloti 1021]
 gi|307302469|ref|ZP_07582226.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307316201|ref|ZP_07595645.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15076274|emb|CAC47827.1| Putative amino-acid transport system permease ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306898041|gb|EFN28783.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306903139|gb|EFN33729.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 273

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 10/230 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLI 229
           L    +T+      FV + VLG+ ++L A       R    F+ +  + +P+L +  ++ 
Sbjct: 47  LKGLGVTVFVTLVGFVLATVLGLGVALMALSEHVVLRQIARFYTEVIRGVPILVLLFYIA 106

Query: 230 F-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           F G P LV +A             +   +   ++        +AL    +AFIAE+ R+G
Sbjct: 107 FVGAPALVTVANFVAAPLISAGWIEPFVVRDVSLM---WRAIMALMIGYSAFIAEVFRAG 163

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V +GQ+EAA ALGL+  +  RLV+ PQA+R I+PPL + ++ ++K+SSL   +G AD
Sbjct: 164 IQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVAD 223

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  +G    + + +  E   I  ++YL L+I ++L +  +  ++   + +
Sbjct: 224 ITQMGKVYASGSFRFFETYSIVAYVYLVLTIGLSLALRAVERRLRRSQVR 273



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 2/157 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T +L G   T ++   G + AT++G  V    LS + ++  I R Y EV R +P LV++
Sbjct: 43  FTVVLKGLGVTVFVTLVGFVLATVLGLGVALMALSEHVVLRQIARFYTEVIRGVPILVLL 102

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           F++       L    + +  P              +++   A + +       +  +F  
Sbjct: 103 FYIAFVGAPALVTVANFVAAPLISAGWIEPFVVRDVSLMWRAIMALMIGYSAFIAEVFRA 162

Query: 206 RL--SRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            +        +  KAL L     F +   P  + + L
Sbjct: 163 GIQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVIL 199


>gi|116670156|ref|YP_831089.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116610265|gb|ABK02989.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 271

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 13/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   SF L +++ LF   L +       + +   ++S F   G P LV     +  +F
Sbjct: 77  VLVTAISFALAMLIGLFMGFL-KISTSVVLRGIATTFVSIF--RGTPLLVW---AFFFYF 130

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L              +++  + LS    A+I EIVR  + +V  GQ+EA+ +LGL 
Sbjct: 131 GIPQLTG-------QPIDIWVAGVLTLSLNAGAYITEIVRGSIQSVDPGQLEASRSLGLG 183

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + K+ + V++PQA + + P L +Q + +LK+SSL +A+GFA+L+  G  I     +  E 
Sbjct: 184 YAKSMQKVVVPQAFKIMTPSLINQLIIMLKDSSLLLAIGFAELLYQGQQIYAGNFRITET 243

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +LI   +Y  + +++    N  + + 
Sbjct: 244 LLIVAVLYFVVIMLLTKLANVADKRF 269



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A++ G  NT  +       A +IG  +G  ++S + ++  I   +V +FR  P LV  FF
Sbjct: 68  ALMKGLGNTVLVTAISFALAMLIGLFMGFLKISTSVVLRGIATTFVSIFRGTPLLVWAFF 127

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  +  +   P    V
Sbjct: 128 FYFGIPQLTGQPIDIWV 144


>gi|317404628|gb|EFV85028.1| amino-acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 249

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 14/230 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           V  +   + +         +     + + SF LG+ L+ F   L R F      AL   Y
Sbjct: 24  VPAWVQLMADSFWPLLHAGLVFTVPLTLMSFALGLALA-FVVALIRLFGPAPLVALVRFY 82

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +LI G P LV + + +                   V     +  I  +    A+ +E
Sbjct: 83  V--WLIRGTPLLVQLFVIFY-----------GLPSVGVVLDPLPAALIGFTLNVGAYNSE 129

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++ +GQ EAA +L +T  +A R  +LPQA R  +PPL++ ++ L+K++SLA  
Sbjct: 130 VIRGAIESISKGQWEAAYSLSMTRGQALRRTVLPQAARVAVPPLSNSFIALVKDTSLAAV 189

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   ++      I   T + + +      IYL  S +++    RL  +  
Sbjct: 190 LTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSVLSAAQVRLERRFG 239



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 34/91 (37%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G V T  L          +  +V   RL     +  + R YV + R  P 
Sbjct: 32  ADSFWPLLHAGLVFTVPLTLMSFALGLALAFVVALIRLFGPAPLVALVRFYVWLIRGTPL 91

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + SV  + D       G  LN
Sbjct: 92  LVQLFVIFYGLPSVGVVLDPLPAALIGFTLN 122


>gi|94987195|ref|YP_595128.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731444|emb|CAJ54807.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 230

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 12/186 (6%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                + L ++Y+   +I G P +VL+     L+F  P       +      P   +  I
Sbjct: 49  RFPFLRTLAVIYVE--IIRGTPLIVLVMF---LYFALP-------LALDIHIPPNWAGVI 96

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A+   + A+IAEIVR  +I++  GQMEAA + GLTH +A   ++ PQA R +IPPLT+Q 
Sbjct: 97  AIGVNSGAYIAEIVRGSIISISHGQMEAARSTGLTHAQAMLYIIWPQAFRRMIPPLTNQC 156

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  LK++SL V +G  +L   G  II+   +A E+ L     YL +++ I+  +  L  +
Sbjct: 157 IISLKDTSLLVVIGVGELTRQGQEIISVNFRAFEVWLTVAIFYLIMTLSISALLKYLERR 216

Query: 392 IALKEK 397
           + L  +
Sbjct: 217 LVLPGR 222


>gi|251789977|ref|YP_003004698.1| arginine transporter permease subunit ArtQ [Dickeya zeae Ech1591]
 gi|247538598|gb|ACT07219.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 238

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 2/184 (1%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
            + LP + +  F+ FG   L+LI    + L+     +     I    VSP F+   IALS
Sbjct: 54  LRGLPEILVVLFIYFGSSQLLLILSDGFTLNLGLAQIPVKLAIDNFEVSP-FLCGVIALS 112

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ ++ +R  L AVP+GQ E+  ALG++     R +++PQ  R  +P L +Q+L L
Sbjct: 113 LLYAAYASQTLRGALKAVPQGQWESGQALGMSKGVIFRRLIMPQMWRHALPGLGNQWLVL 172

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK+++L   +   DL+    +I  +T +     +I   IYL ++++    + R+  +   
Sbjct: 173 LKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLVITLLSQAILKRIETRATR 232

Query: 395 KEKK 398
            E++
Sbjct: 233 FERR 236


>gi|217422535|ref|ZP_03454038.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 576]
 gi|217394766|gb|EEC34785.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 576]
          Length = 617

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGS 260
           L     S          + L      ++  L    L  L   +    P     F  +  +
Sbjct: 102 LARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFAEVATT 161

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAM
Sbjct: 162 DLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 381 IALFMNRLNAKIALKEKK 398
           +++   ++  + A    +
Sbjct: 282 LSIVQAQVERRYARGAVR 299


>gi|149190471|ref|ZP_01868742.1| putative amino acid ABC transporter, permease protein [Vibrio
           shilonii AK1]
 gi|148835725|gb|EDL52691.1| putative amino acid ABC transporter, permease protein [Vibrio
           shilonii AK1]
          Length = 247

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 29/265 (10%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +  ++ +  L                   G       L+    T+  +    +F+ +
Sbjct: 3   YRLLTVVLCLPLLSGCSDYEWGWYVLDPSTEQGKTNLGFLLAGFKDTIYVSLLSMMFAML 62

Query: 196 LGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++++          R     + +  +++P+L +  ++ +G+PTL+ I+L +       
Sbjct: 63  IGLLVAFPALSDKPWLRAINRVYVEVIRSIPVLVLLLWVYYGMPTLLDISLNH------- 115

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                           F +  IAL+   +AF+AE+ R G+ AV RGQ EAA +LGL + +
Sbjct: 116 ----------------FWAGVIALTIAESAFMAEVFRGGIQAVTRGQHEAAESLGLNYWQ 159

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      +EI   
Sbjct: 160 KMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTF 219

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
            +  YL L ++++  +  L  +IA+
Sbjct: 220 LVLEYLVLILLVSQAVRWLEKRIAI 244



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               +    +L GF +T +++   M+ A +IG LV    LS    +  I RVYVEV R+I
Sbjct: 33  EQGKTNLGFLLAGFKDTIYVSLLSMMFAMLIGLLVAFPALSDKPWLRAINRVYVEVIRSI 92

Query: 140 PPLVVIFFLYKSVL 153
           P LV++ ++Y  + 
Sbjct: 93  PVLVLLLWVYYGMP 106


>gi|194365477|ref|YP_002028087.1| polar amino acid ABC transporter inner membrane subunit
           [Stenotrophomonas maltophilia R551-3]
 gi|194348281|gb|ACF51404.1| polar amino acid ABC transporter, inner membrane subunit
           [Stenotrophomonas maltophilia R551-3]
          Length = 581

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 11/249 (4%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SVL  P          F     L     T+   A      F LG +L+L     +R    
Sbjct: 48  SVLGNPRWGWGTFAEWFFARPVLEGLGRTLLLTALGTGLGFALGTLLAL-----ARVSGS 102

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGST-VSPEFM 267
               A+   Y+  F    L  L+L+          +    P  G   F   +T +   F 
Sbjct: 103 PLLSAVSWGYVWLFRSIPLLVLLLLLNNLGYLYSTIELGIPFTGISLFSYPTTQLIGVFT 162

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+   AAF AE++R G+++V  GQ EAA ALGL   +  R ++LPQAMRSI+P  
Sbjct: 163 AAVLGLTLNQAAFSAEVIRGGILSVDHGQYEAAAALGLPRGRQVRRIILPQAMRSILPAA 222

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  + L K++S+   +   +L      I  +  + + ++++    YL +  +++L   R
Sbjct: 223 FNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLLQRR 282

Query: 388 LNAKIALKE 396
           +  + A  +
Sbjct: 283 VEQRFARGQ 291



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++  +A  +L G   T  L   G      +GTL+   R+S + L++ +   YV +FR+IP
Sbjct: 61  AEWFFARPVLEGLGRTLLLTALGTGLGFALGTLLALARVSGSPLLSAVSWGYVWLFRSIP 120


>gi|58040006|ref|YP_191970.1| amino acid ABC transporter permease [Gluconobacter oxydans 621H]
 gi|58002420|gb|AAW61314.1| Amino acid ABC transporter binding protein and permease protein
           [Gluconobacter oxydans 621H]
          Length = 508

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 96/188 (51%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           SRH+     + +  +Y+   ++ G P L+ +   +   +  P         G  +SP FM
Sbjct: 327 SRHYGAAPLRFVAGVYVE--VVRGTPLLIQVLFIF---YGLPAF-------GIRLSP-FM 373

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  ++L    AA+ AE  R+GL++VPRGQMEAAIAL +TH +A RLV++PQA R+++P +
Sbjct: 374 AGVLSLGLNYAAYEAENYRAGLLSVPRGQMEAAIALNMTHWQALRLVIVPQAFRTVVPVM 433

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T+ +++LLK+SSL   +   +L      + +         ++    YL L +        
Sbjct: 434 TNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGIMVGLAYLLLGLPFVRLARM 493

Query: 388 LNAKIALK 395
              ++   
Sbjct: 494 AERRLGRG 501



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 65/195 (33%), Gaps = 8/195 (4%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           + T  ++   M+ A  +G L+   R      + ++  VYVEV R  P L+ + F++  + 
Sbjct: 304 LMTLAVSALAMVLAVALGLLLALSRHYGAAPLRFVAGVYVEVVRGTPLLIQVLFIFYGLP 363

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           +        +     + LN                + V    +   ++L  T        
Sbjct: 364 AFGIRLSPFMAGVLSLGLNYAAYEAENYRAGL---LSVPRGQMEAAIALNMTHWQALRLV 420

Query: 214 KTGKAL----PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMS 268
              +A     P++      +    +LV +    +L      L   +    G+ +      
Sbjct: 421 IVPQAFRTVVPVMTNDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGIMVGLAY 480

Query: 269 LYIALSCYTAAFIAE 283
           L + L     A +AE
Sbjct: 481 LLLGLPFVRLARMAE 495


>gi|307706378|ref|ZP_07643190.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307709103|ref|ZP_07645562.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
 gi|307618296|gb|EFN97451.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307620049|gb|EFN99166.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
          Length = 227

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTVLISICVVFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQVGILG--VDLSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +     ++   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKRMGQGDKK 227



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTVLISICVVFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|301052295|ref|YP_003790506.1| ABC transporter permease [Bacillus anthracis CI]
 gi|300374464|gb|ADK03368.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus biovar anthracis str. CI]
          Length = 218

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG+VL++      R           L ++ T  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRI----------LNWLGTAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 36/69 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVLSVLP 157
           Y ++  V  
Sbjct: 74  YFALPVVGI 82


>gi|296139696|ref|YP_003646939.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296027830|gb|ADG78600.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 316

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 114/235 (48%), Gaps = 14/235 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    LT+   A  F   FVLGI L+       R +     +++   ++  +++
Sbjct: 63  FTQESILEGLGLTLWLTAVTFTAGFVLGIGLAAM-----RLWGGPLLQSVSFGFV--WIV 115

Query: 230 FGLPTLVLIALKYQL-------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +P LVL+   +QL           P   +F     + +    ++ +IAL+   AAF A
Sbjct: 116 RSVPPLVLLLFWFQLASLYPQLSLGIPFGPEFVTFNTTHLIAPLVAAFIALTLDVAAFAA 175

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR GL++V  GQ EAA +LGL  R+  R ++LPQAM +IIP   +  + LLK++SL  
Sbjct: 176 EIVRGGLVSVDPGQTEAARSLGLNPRRIFRRIVLPQAMPAIIPSSGNLLIGLLKSTSLVS 235

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   DL+     I NQ  + + ++L+    Y+ ++ ++A+    +  +     +
Sbjct: 236 VIAVTDLLYSVQLIYNQNFKVMPLLLVATIWYIVITSVLAIGQYFVERRFQRGRR 290



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T WL         ++G  + A RL    L+  +   +V + R++PPLV++ F 
Sbjct: 68  ILEGLGLTLWLTAVTFTAGFVLGIGLAAMRLWGGPLLQSVSFGFVWIVRSVPPLVLLLFW 127

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++       +       P  +  N   L  P +       + V +F   IV  
Sbjct: 128 FQLASLYPQLSLGIPFGPEFVTFNTTHLIAPLVAAFIALTLDVAAFAAEIVRG 180


>gi|242278993|ref|YP_002991122.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242121887|gb|ACS79583.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 233

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 71/236 (30%), Positives = 115/236 (48%), Gaps = 9/236 (3%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                   L          +    +T+  +A   VF+ +LG ++++      R    K  
Sbjct: 1   MNYQFDWNLVLSGQYGQWIIDGVKVTLQISAVSIVFTLLLGTIVAVM-----RMSKFKPF 55

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +     ++  F     P L+ I   Y   +   +L +           EF +  I+L+ Y
Sbjct: 56  EWFSFAFVEFF--RNTPLLIQIFFWYFGSYA--ILPEGVNEWLYDHDFEFAAGVISLTVY 111

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TAAF+AE +R+G+ ++P+ Q+EA+ A GL+  +A R V+LPQA R IIPPL SQ LNL+K
Sbjct: 112 TAAFVAEEIRAGINSIPKNQLEASRATGLSFLQAYRYVILPQAFRIIIPPLISQSLNLIK 171

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NSSL + +G  DL  +   I + T    E   +   IYL +S++++L +N  N   
Sbjct: 172 NSSLVMTIGVMDLTYMARQIESYTFHGFEAFTVATVIYLCISLVVSLMINMYNKHF 227



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   I+ G   T  ++   ++   ++GT+V   R+S  K   W    +VE FRN P 
Sbjct: 12  SGQYGQWIIDGVKVTLQISAVSIVFTLLLGTIVAVMRMSKFKPFEWFSFAFVEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           L+ IFF Y    ++LP   +  +  
Sbjct: 72  LIQIFFWYFGSYAILPEGVNEWLYD 96


>gi|170691225|ref|ZP_02882390.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143430|gb|EDT11593.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 222

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                       ++   S  L   L L           +        Y++ F    L   
Sbjct: 12  WPDIMQGALVTVEVTAASLALSCALGLLIGIGRLTPQRRIVYGFCTAYLTFFRGTPLLVQ 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +       F               + P F+   + L  Y+AA+++EIVR  + +V RG
Sbjct: 72  LFLLFFGLPQFG-------------ILLPAFLCGMLGLGLYSAAYVSEIVRGAIQSVDRG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G++  +A R ++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  
Sbjct: 119 QMEAARSIGMSSGQAMRAIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIDDLMHEGQK 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           II+ + +++E+ L    +YL L+ +    ++R+  ++ + 
Sbjct: 179 IISVSYRSLEVYLAIALVYLVLTQVTNFALHRVERRLRVG 218


>gi|167895469|ref|ZP_02482871.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 7894]
 gi|167920093|ref|ZP_02507184.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei BCC215]
 gi|254196113|ref|ZP_04902538.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei S13]
 gi|169652857|gb|EDS85550.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei S13]
          Length = 219

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAALTMKFAVASMVLGLIVGLLV-ALVRIGSNRLLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G ++ P   +  + L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDI----------GISLDPT-AAGILTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 35/70 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F 
Sbjct: 13  VLAKGAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLP 157
           +Y  +  +  
Sbjct: 73  VYYGLPDIGI 82


>gi|294789394|ref|ZP_06754631.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Simonsiella muelleri ATCC 29453]
 gi|294482607|gb|EFG30297.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Simonsiella muelleri ATCC 29453]
          Length = 260

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 17/249 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-- 223
            F   +                +I   + + G +L L    L+R    + G A   +   
Sbjct: 13  DFRFDIIWEYRDMFFKGALLTLEITAVAVLGGTILGLMG-ALARIIKIEKGGAFVKIIMF 71

Query: 224 -------ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF-------MSL 269
                  +   L  G P  V I + + +     +      +    ++ E        ++ 
Sbjct: 72  ILRTLSGVYVTLFRGTPLFVQIFIWHFVWSVALINPNDGLLISGDLAAELRRNHGALIAG 131

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
             AL+    A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R ++LPQA+R ++PP+ +
Sbjct: 132 VFALTVNAGAYITEIFRAGIQSIDKGQMEAARSLGLTYAQAMRFIILPQALRRMLPPIAN 191

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ LLK+SSLA A+  A+L  V  TI  +     E +     IYL +++ ++    RL 
Sbjct: 192 EFITLLKDSSLASAIAVAELAYVQKTISGRYSIYEEPLYTIALIYLIMTMCLSWIFTRLE 251

Query: 390 AKIALKEKK 398
            K    ++ 
Sbjct: 252 KKYNANQQH 260



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 54/169 (31%), Gaps = 13/169 (7%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----------KLVAW 127
           +     Y      G + T  +    ++  TI+G +    R+               ++  
Sbjct: 16  FDIIWEYRDMFFKGALLTLEITAVAVLGGTILGLMGALARIIKIEKGGAFVKIIMFILRT 75

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  VYV +FR  P  V IF  +      L  P+  +++   +    R      +      
Sbjct: 76  LSGVYVTLFRGTPLFVQIFIWHFVWSVALINPNDGLLISGDLAAELRRNHGALIAGVFAL 135

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
            +   +++  I  +   +        +  ++L L Y        LP  +
Sbjct: 136 TVNAGAYITEIFRAGIQS--IDKGQMEAARSLGLTYAQAMRFIILPQAL 182


>gi|254477959|ref|ZP_05091344.1| ABC-type glutamine transport system, permease component [Ruegeria
           sp. R11]
 gi|214028544|gb|EEB69380.1| ABC-type glutamine transport system, permease component [Ruegeria
           sp. R11]
          Length = 254

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 8/238 (3%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               V+          + F    M     I V + V+ IVL L    L     ++  + +
Sbjct: 24  WGWYVIDPTTAAGWTNIKFLISGMGDTILISVIAAVISIVLGLLV-ALPGLSEKRGWRIV 82

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +Y+          + L+ + + + +  P++  F  +G +     F    I L+   +A
Sbjct: 83  NRVYVELIR-----AIPLLPMLFWVFYGLPII--FRSMGLNVPIDPFWGAIITLALSDSA 135

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F AEI R+G+ ++ +GQ EAA  +GL++ +  R V+LPQA+R I+PPL +Q++ ++K S+
Sbjct: 136 FTAEIYRAGIQSIAKGQREAAQTVGLSYAQTMRYVILPQAIRRILPPLANQFIYIVKMSA 195

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            A  +G  +L      ++    + +EI  + +  YL L ++I+  +  L  ++   E+
Sbjct: 196 FASVIGMQELTRRANELVVTEYRPLEIYTLLILEYLILVLLISAGVRWLERRMGSDER 253



 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 38/79 (48%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +  +    ++ G  +T  ++    + + ++G LV    LS  +    + RVYVE+ R IP
Sbjct: 35  AGWTNIKFLISGMGDTILISVIAAVISIVLGLLVALPGLSEKRGWRIVNRVYVELIRAIP 94

Query: 141 PLVVIFFLYKSVLSVLPIP 159
            L ++F+++  +  +    
Sbjct: 95  LLPMLFWVFYGLPIIFRSM 113


>gi|209547158|ref|YP_002279076.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538402|gb|ACI58336.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 290

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 8/254 (3%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  L     +V               ++   L    LT++  A   VF   LG +L++ A
Sbjct: 33  ILALILLGSAVAQSQSVQWSEIPRYLVHPSILRGVLLTLELTAGAMVFGISLGCLLAVMA 92

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVS 263
                       KA+   ++  F   G+P +V I L + +    P +      I  + + 
Sbjct: 93  -----TSTNFVLKAIAAGFVWWF--RGVPLIVQIFLWFNIALFIPQVGVGHYSISINDLV 145

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              ++ ++AL  + AA ++EI+RSGL+A+ RGQ EAA ALGL  R+  R V+LPQA R I
Sbjct: 146 TPALAGFLALGLHEAANMSEIIRSGLLAIDRGQREAATALGLKSRQTFRTVILPQAARLI 205

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPP  +Q + +LK S++   +G  DL++    I  +    IE++ +    YL+++ + ++
Sbjct: 206 IPPTGNQAIGMLKASAIVSVIGMQDLLTQAQVIYARNFLVIELLFVASIWYLAITTVASI 265

Query: 384 FMNRLNAKIALKEK 397
             + L   +  K +
Sbjct: 266 GQHYLEKSLQPKYR 279



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 32/77 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L    M+    +G L+     S N ++  I   +V  FR +P +V IF  
Sbjct: 63  ILRGVLLTLELTAGAMVFGISLGCLLAVMATSTNFVLKAIAAGFVWWFRGVPLIVQIFLW 122

Query: 149 YKSVLSVLPIPDHSIVL 165
           +   L +  +      +
Sbjct: 123 FNIALFIPQVGVGHYSI 139


>gi|225870042|ref|YP_002745989.1| amino acid ABC transporter permease protein [Streptococcus equi
           subsp. equi 4047]
 gi|225699446|emb|CAW92946.1| putative amino acid ABC transporter permease protein [Streptococcus
           equi subsp. equi 4047]
          Length = 227

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 120/236 (50%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +TM  +A +  F  ++G++++L      +  H K    L  L
Sbjct: 1   MDFTFLPKYWAYFNYGVLVTMMISACVVFFGTIIGLLVTLI-----KRSHIKPLSWLVSL 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  LHF+   +  F  +         +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWLHFNDLPIVGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++ + ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPKNAMRYVILPQAFKNILPALGNELITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G  +L +   +++  T   I  +L   F YL ++ +++  +  L  K+A   +
Sbjct: 172 QTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMITTILSQLLGCLERKLAQGGR 227



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T    Y      G + T  ++   +   TIIG LV   + S  K ++W+  +YV +F
Sbjct: 1   MDFTFLPKYWAYFNYGVLVTMMISACVVFFGTIIGLLVTLIKRSHIKPLSWLVSLYVWIF 60

Query: 137 RNIPPLVVIFFLYKSV 152
           R  P +V I   +  +
Sbjct: 61  RGTPMVVQIMIAFAWL 76


>gi|282856520|ref|ZP_06265795.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyramidobacter piscolens W5455]
 gi|282585641|gb|EFB90934.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyramidobacter piscolens W5455]
          Length = 217

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 14/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +      +    +   F  + G  L +F     R    K  + L   YI  +++ G P
Sbjct: 10  PYMHMFWKGVCVTIQASFFGVLFGSALGIFIGSF-RVMPFKPLRYLMATYI--YVLRGTP 66

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ + L Y   F  P L                +  + +   ++ ++ EIVR G+  VP
Sbjct: 67  LMIQLFLIY---FGLPAL--------GVNLDAATAGILGIGINSSGYVGEIVRGGIEGVP 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA  LGL++ +  + ++LPQA+R ++P + ++++ L+K SSL   +  +DL  VG
Sbjct: 116 KGQWEAAKMLGLSYWQTMKSIILPQAIRHMLPAIGNEFVTLIKESSLLSVLAISDLTMVG 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + + T  + E  +    +YL L+ + +  +  L  +  +K
Sbjct: 176 QQVRSVTYASFETFIFVALVYLVLTSVTSGALQLLENRWKVK 217



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 43/96 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y      G   T   +F G++  + +G  +G+ R+   K + ++   Y+ V 
Sbjct: 3   LDFSVLIPYMHMFWKGVCVTIQASFFGVLFGSALGIFIGSFRVMPFKPLRYLMATYIYVL 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           R  P ++ +F +Y  + ++    D +     G+ +N
Sbjct: 63  RGTPLMIQLFLIYFGLPALGVNLDAATAGILGIGIN 98


>gi|255659183|ref|ZP_05404592.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
 gi|260848634|gb|EEX68641.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
          Length = 214

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 15/224 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +       +   +IF  + V+ + L + A  L R    +   A    YI  +L+ G P
Sbjct: 6   NTILQMLEGSEITLEIFFVTLVIALPLGMMA-ALGRLSKWRPLSAFMEFYI--WLMRGTP 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ +   Y           F         P+  +  +A +   AA+ AEI R+G+ +VP
Sbjct: 63  LMLQLLFVY-----------FALPMIGIRLPDIAAALLAFTLNYAAYFAEIFRAGIQSVP 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA  LG+ + +  R ++LPQ +R ++PP++++ +NL+K++SL   +   DL+ V 
Sbjct: 112 KGQYEAARTLGMNYTQTMRRIILPQVIRIVLPPVSNETINLVKDTSLIYILAMNDLLRVA 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            TI+ +    +   LI    YL+++ ++     +L A     +K
Sbjct: 172 RTIVQREFD-MTPFLIAGVFYLAMTFVLTWMFKKLEAYYGKYDK 214



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  ++ A  +G +   GRLS  + ++     Y+ + R  P ++ + F+
Sbjct: 11  MLEGSEITLEIFFVTLVIALPLGMMAALGRLSKWRPLSAFMEFYIWLMRGTPLMLQLLFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y ++  +               LN 
Sbjct: 71  YFALPMIGIRLPDIAAALLAFTLNY 95


>gi|254512946|ref|ZP_05125012.1| ABC-type glutamine transport system, permease component
           [Rhodobacteraceae bacterium KLH11]
 gi|221532945|gb|EEE35940.1| ABC-type glutamine transport system, permease component
           [Rhodobacteraceae bacterium KLH11]
          Length = 252

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 24/250 (9%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRL 207
                         G       +S    T+  +    V S  +G++++L         RL
Sbjct: 20  QTWGWYVIDPTTASGWTNVKFLISGMGATIQISLIAAVLSIAIGLLVALPGLSEKRSWRL 79

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
               + +  +A+PLL +  ++ +GLP +                  F  +G +     F 
Sbjct: 80  VNRVYVEFIRAIPLLPMLFWVFYGLPIV------------------FQSMGLNIPIDPFW 121

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              I L+   +AF AEI R+G+ ++ RGQ EAA  +GL + +  R V+LPQA+R I+PPL
Sbjct: 122 GAIITLAISDSAFTAEIYRAGIQSIARGQREAAQTIGLNYIQTMRYVILPQAIRRILPPL 181

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q++ ++K S+ A  +G  +L      ++    + +EI  + +F YL L ++I+  +  
Sbjct: 182 ANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPLEIYTLLIFEYLILVLIISAGVRW 241

Query: 388 LNAKIALKEK 397
           L  ++   E+
Sbjct: 242 LERRMGADER 251



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 35/79 (44%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S  +    ++ G   T  ++    + +  IG LV    LS  +    + RVYVE  R IP
Sbjct: 33  SGWTNVKFLISGMGATIQISLIAAVLSIAIGLLVALPGLSEKRSWRLVNRVYVEFIRAIP 92

Query: 141 PLVVIFFLYKSVLSVLPIP 159
            L ++F+++  +  V    
Sbjct: 93  LLPMLFWVFYGLPIVFQSM 111


>gi|116494154|ref|YP_805888.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|116104304|gb|ABJ69446.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
          Length = 237

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 5/210 (2%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      F    ++ ++ +L    + + F     K     Y+  F     P LV + +
Sbjct: 19  YTIPIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLF--RSTPLLVQLFI 76

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +   F  P L               ++  I  S  T A+ AE +R+ L+++  GQ EAA
Sbjct: 77  VF---FGLPSLIIPGIFPHGIKLDPVIAGIITFSLNTGAYCAETIRAALLSIDHGQWEAA 133

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++GL  R   R +++PQA+R+ +PPL++ +++L+K++SLA ++   ++  V   I  + 
Sbjct: 134 YSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQVSQQIAAEN 193

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            Q + +  +   +Y  +  ++      L  
Sbjct: 194 YQPLLMYSLVALLYAVVCTVLTWGQRYLEK 223


>gi|86360984|ref|YP_472871.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CFN
           42]
 gi|86285086|gb|ABC94144.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CFN
           42]
          Length = 513

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 22/218 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   ++G+VL++     SR              I T +  GLP +V I +  Q 
Sbjct: 35  LAAASTVLGVIIGMVLAVMGISQSRWLRLPA-------RIYTDIFRGLPAIVTILIIGQ- 86

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  F    +ALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 87  --------GFARIGRDIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            +++ +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 139 SMSYGQGMRLIVIPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG  +  +L+    YL++++ +  F+N ++A++ L ++
Sbjct: 199 TGN-LSPLLLAGVFYLAITVPLTHFVNHIDARLRLGKQ 235



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 36/80 (45%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           +G  NT  LA +  +   IIG ++    +S ++ +    R+Y ++FR +P +V I  + +
Sbjct: 27  IGLKNTLILAAASTVLGVIIGMVLAVMGISQSRWLRLPARIYTDIFRGLPAIVTILIIGQ 86

Query: 151 SVLSVLPIPDHSIVLPFGMF 170
               +          P G+ 
Sbjct: 87  GFARIGRDIFGPSPFPLGIL 106


>gi|330971469|gb|EGH71535.1| ABC transporter permease protein [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 223

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 101/234 (43%), Gaps = 17/234 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +P +       +      ++    T+ T     +   ++GI+ +L      R  + K   
Sbjct: 1   MPVYHWDFLSLLQYKQLLITGLWYTLGTTVACTILGMLVGILTALP-----RLSNNKVLC 55

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A    Y+  F     P LV +      ++  PV+                +  + LS Y 
Sbjct: 56  APFRAYVEIF--RCTPVLVQLV---WFYYALPVVTGMQI-------GAMTAALLCLSLYG 103

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF +EI R G++++  GQ EAA ALG+   +    +++PQA+R +IPPL +Q +  LKN
Sbjct: 104 GAFYSEIFRGGIMSIDEGQSEAARALGMRRFQVMWRIVIPQALRRMIPPLVNQSIMQLKN 163

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SL   +   DL+  G  I + + + +E+  +    Y  + +   +   RL  +
Sbjct: 164 TSLLSVLALPDLLYQGQVIAHDSYRPLEVYSVVAVAYFIILLPATIISKRLEGR 217



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 37/81 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S   Y   ++ G   T     +  I   ++G L    RLS NK++    R YVE+FR
Sbjct: 7   DFLSLLQYKQLLITGLWYTLGTTVACTILGMLVGILTALPRLSNNKVLCAPFRAYVEIFR 66

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P LV + + Y ++  V  +
Sbjct: 67  CTPVLVQLVWFYYALPVVTGM 87


>gi|9929260|emb|CAC05299.1| putative transmembrane protein [Lactobacillus reuteri]
          Length = 233

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/202 (24%), Positives = 107/202 (52%), Gaps = 2/202 (0%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF+ G++++L  T L R   ++ G  + L +I++F ++   +  L+   + + F  
Sbjct: 23  LAIISFLFGLIIALV-TALIRLSRQR-GAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L     +        F +  I  S  T A+ +E +R+ + +VP GQ EA  A+G+T  
Sbjct: 81  PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAISSVPTGQWEAGAAIGMTRL 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA+R  +PPL++ +++L+K++SLA ++   ++ +V   I  +  Q + +  
Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200

Query: 369 IWMFIYLSLSIMIALFMNRLNA 390
           +   +Y + + +++ F   L  
Sbjct: 201 LVAMVYAAFTTILSYFQGYLER 222



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 4/87 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----LVAWICRVYVEVFRNIPPLVV 144
           +  GF  T  LA    +   II  +    RLS  +    ++ WI   YV +FR+ P LV 
Sbjct: 13  LAAGFKYTIPLAIISFLFGLIIALVTALIRLSRQRGAFMILKWIASFYVWLFRSTPLLVQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           +F ++  +  +         +    F 
Sbjct: 73  LFIVFFGLPYLRIKGVLPHGIKLEPFT 99


>gi|260583461|ref|ZP_05851209.1| amino acid ABC transporter amino acid-binding/permease
           [Granulicatella elegans ATCC 700633]
 gi|260158087|gb|EEW93155.1| amino acid ABC transporter amino acid-binding/permease
           [Granulicatella elegans ATCC 700633]
          Length = 257

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 89/185 (48%), Gaps = 12/185 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           S+    K   A+   Y   F   G P +V   + Y                G  +   F 
Sbjct: 55  SKRITLKIANAILTAYTEFF--RGTPMIVQAMVIYYGS---------ALAFGIDMDRTFA 103

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +++I +S  T A+++EIVR G+I++ +GQ EAA A+G+TH +    V+ PQ +R+I+P  
Sbjct: 104 AIFI-VSINTGAYMSEIVRGGIISIDKGQFEAAQAIGMTHTQTMMNVVFPQVIRNILPAT 162

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++++  +K++S+   +  ++L     T+     +  E   + + +Y  ++ ++   +  
Sbjct: 163 GNEFVINIKDTSVLNVISVSELYFATKTVAGANFRYFETFFVTLILYFIMTTVLTQILRY 222

Query: 388 LNAKI 392
           +  ++
Sbjct: 223 IERRM 227


>gi|163736869|ref|ZP_02144287.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
 gi|161389473|gb|EDQ13824.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
          Length = 273

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               R    F+ +  + +P++ +  ++ F L P LV +      H     +   NF    
Sbjct: 82  WLVIRQGARFYIEVVRGIPIIVLLLYVAFVLAPALVELRNWLGDHIGLDPIRTRNF---- 137

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
              P      IAL    +AFI+E+ R+GL +V  GQ+EAA +LGL+     R ++ PQA+
Sbjct: 138 ---PLLWRAIIALMIAYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAI 194

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+PPL + ++ L+K+SSL   +G AD+  +G        +  E   +   IYL+L+I 
Sbjct: 195 RTILPPLGNDFVALVKDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIG 254

Query: 381 IALFMNRLNAKIALKEKK 398
           ++L + R    +  +E++
Sbjct: 255 LSLLLRRFEKHLRRREER 272


>gi|110668633|ref|YP_658444.1| ABC-type glutamine/glutamate/polar amino acids transport system,
           permease protein [Haloquadratum walsbyi DSM 16790]
 gi|109626380|emb|CAJ52839.1| ABC-type glutamine/glutamate/polar amino acids transport system,
           permease protein [Haloquadratum walsbyi DSM 16790]
          Length = 284

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 9/216 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            I V S VL +   +F   L+R       + +   Y+  F   G P L
Sbjct: 69  LPQFIGAYGLVLGIVVASSVLSVTAGIFVG-LARVSKTNITRGISAAYVQFF--RGTPLL 125

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             I + Y   F  P L    F       P   +  ++L+   AA++ E VR G+ AVP G
Sbjct: 126 FQIFVIY---FGIPTLWPGTFPIQGWGLP---TAILSLTLNHAAYVGEAVRGGIGAVPDG 179

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LG+ + +A R V++PQA R+ +  + +  + L+K++SL   +   +L+     
Sbjct: 180 QMEAARSLGMGYVQAMREVVIPQAWRNALAAIGNDQIILVKDTSLLTVIAIPELIQQFRD 239

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + + T      +L+    YLS+++ +   +  L  +
Sbjct: 240 VNSATFDPWTPLLLVAIAYLSITVPMGRLVEYLETR 275



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 5/95 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I  G++P     +     +  +     +  +  + +   G  VG  R+S   +   I  
Sbjct: 59  QISYGLIP-----TILPQFIGAYGLVLGIVVASSVLSVTAGIFVGLARVSKTNITRGISA 113

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            YV+ FR  P L  IF +Y  + ++ P        
Sbjct: 114 AYVQFFRGTPLLFQIFVIYFGIPTLWPGTFPIQGW 148


>gi|330970030|gb|EGH70096.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aceris str. M302273PT]
          Length = 329

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +     L   V S+   P     +    F +   L     T+       +FS +L
Sbjct: 42  RWIGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTLFSIIL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----G 252
           G  L+L     +R        AL   YI  F       +++I   +   +D  VL     
Sbjct: 102 GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156

Query: 253 QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           Q  F   STV    +F    + LS   +A+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 QLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTVLTSAQYYVERHFARGSAR 304



 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|302334976|ref|YP_003800183.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
 gi|301318816|gb|ADK67303.1| polar amino acid ABC transporter, inner membrane subunit [Olsenella
           uli DSM 7084]
          Length = 439

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 119/262 (45%), Gaps = 9/262 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV+ F      ++    +    L   +++   G +     + T  ++ +F  V+   L++
Sbjct: 130 VVMGFSAIVSAAIASDTNPQDFLSGAVYMVFEGRAIFAQGIATTVELALFGTVIAFFLAI 189

Query: 203 FATRLS-------RHFHEKTGKALPLLYISTF--LIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F   L         +   +  K L + +   +  ++ G P +V   L Y   F       
Sbjct: 190 FLVFLRIQQIDRPDNDAVRFLKVLGVGFARVYSSVVRGTPMMVQSLLIYFAGFAVLRGTG 249

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            +     +V   F++  + +S  + A++ E++R G+ AV  GQ EAA +LGL+  +A   
Sbjct: 250 MSTTQIGSVWTTFVAGLVTISLNSTAYMMEVLRGGIEAVDAGQTEAARSLGLSQWQAMTK 309

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+ PQ +++ IP L+++ +  +K+SS+   +G  DL+    T+     + +E+  +    
Sbjct: 310 VVFPQGIKNAIPALSNELVVNIKDSSVLSVIGVFDLMFATTTVAGIYYRQLEVYAVATLC 369

Query: 374 YLSLSIMIALFMNRLNAKIALK 395
           YL L+++ +  ++ +   + + 
Sbjct: 370 YLILTMIASKLLSIMAHHLDVS 391


>gi|294083903|ref|YP_003550660.1| amino acid ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663475|gb|ADE38576.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 298

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 113/266 (42%), Gaps = 11/266 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V    +Y    S +             ++ N  L     T+       + + ++G+++  
Sbjct: 34  VSDVLVYNWNWSRVLNFVIYYDEENARYVPNLLLKGIATTLRLAFWATIVAAIIGLLMGF 93

Query: 203 F------ATRLSRHFHEKTGKALPLLYISTFLIFGL--PTLVLIALKYQLHFDKPVLGQF 254
                  A R+    + +  + +P +       F L    + LI L         V    
Sbjct: 94  MRTSKNLAMRMISRCYVELIRNIPPVVFIFIFYFFLSGQLMPLIGLDDIDKNGAFVSSDI 153

Query: 255 NF--IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F   G   +   F++  + L+ +  A+I EIVR+G+ +VP+GQ EAA A+GL+      
Sbjct: 154 FFTLFGDPKLFSNFVAGALCLALFEGAYITEIVRAGIQSVPKGQWEAARAVGLSPLDVLG 213

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ PQA+R I+PPL  Q++ L+K+S++   +   +L  +   + + T +  E  +I   
Sbjct: 214 NIIFPQAVRKILPPLAGQFITLIKDSAIVSLISIQELTFLATEVASSTTKVFETWIIVGA 273

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           +Y  +    A     L  + ALK ++
Sbjct: 274 MYFIICYSFAALFAHLEKR-ALKARR 298



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 1/111 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LAF   I A IIG L+G  R S N  +  I R YVE+ RNIPP+V IF  
Sbjct: 66  LLKGIATTLRLAFWATIVAAIIGLLMGFMRTSKNLAMRMISRCYVELIRNIPPVVFIFIF 125

Query: 149 YKS-VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           Y      ++P+     +   G F+++             +     +  L +
Sbjct: 126 YFFLSGQLMPLIGLDDIDKNGAFVSSDIFFTLFGDPKLFSNFVAGALCLAL 176


>gi|268589605|ref|ZP_06123826.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Providencia rettgeri DSM 1131]
 gi|291315079|gb|EFE55532.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Providencia rettgeri DSM 1131]
          Length = 254

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 15/234 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI---FGLPTLV 236
            +T+       +   + G+ L L  T  +     K      + +   F +    G P  V
Sbjct: 21  MMTIKATIICVILGSLWGLTLGLGRTAKAEQGIWKPILHYFVQWPVRFYVSAFRGTPLFV 80

Query: 237 LIALKYQLH---FDKPVLGQFNFIGGSTVSPE---------FMSLYIALSCYTAAFIAEI 284
            I + +      F  P  G F   G  +V            F+S  IA++  + A+++EI
Sbjct: 81  QIMVVHFALVPLFINPRDGLFVTSGLMSVDTAKMLRSDYGAFLSCVIAITLNSGAYVSEI 140

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEA+ ALG++  K  R V+LPQA R I+PPL +  + ++K+SSLA A+
Sbjct: 141 FRAGIQSIDKGQMEASRALGMSWAKTMRKVILPQAFRRILPPLGNNAIAIVKDSSLASAI 200

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ADL     T+        E  L    IY  L+ ++A  +  +  ++   + +
Sbjct: 201 GLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILAQLVQYMERRLGRSDLR 254



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 10/127 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVE 134
           YA     G + T       +I  ++ G  +G GR +           +  V W  R YV 
Sbjct: 12  YAPLFAEGAMMTIKATIICVILGSLWGLTLGLGRTAKAEQGIWKPILHYFVQWPVRFYVS 71

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR  P  V I  ++ +++ +   P   + +  G+   +      +      + +   + 
Sbjct: 72  AFRGTPLFVQIMVVHFALVPLFINPRDGLFVTSGLMSVDTAKMLRSDYGAFLSCVIAITL 131

Query: 195 VLGIVLS 201
             G  +S
Sbjct: 132 NSGAYVS 138


>gi|329118127|ref|ZP_08246839.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465787|gb|EGF12060.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 249

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 104/192 (54%), Gaps = 9/192 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-------VSPEF 266
              + L LLY++ F   G P  V I + Y +     +     ++   T            
Sbjct: 60  WVVRNLSLLYVTVF--RGTPLFVQIFIWYFVWLPALIHPADGWLVSGTAAVELRRNYGAL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL+  + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGVLALTANSGAYITEIFRAGIQSIDKGQMEAARSLGMTYTQAMRFVILPQAVRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ LLK+SSL  A+  A+L  V  TI  +     E +     IYL++++ ++   +
Sbjct: 178 LANEFITLLKDSSLLSAIAVAELAYVQRTISGRYTVYEEPLYAIALIYLAMTLCLSWLFS 237

Query: 387 RLNAKIALKEKK 398
            L  + +L+  +
Sbjct: 238 SLEKRYSLQRHR 249


>gi|148543531|ref|YP_001270901.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184152937|ref|YP_001841278.1| ABC transporter permease component [Lactobacillus reuteri JCM 1112]
 gi|227363514|ref|ZP_03847634.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus reuteri MM2-3]
 gi|227545192|ref|ZP_03975241.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus reuteri CF48-3A]
 gi|300909131|ref|ZP_07126592.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|325681879|ref|ZP_08161397.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530565|gb|ABQ82564.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183224281|dbj|BAG24798.1| ABC transporter permease component [Lactobacillus reuteri JCM 1112]
 gi|227071451|gb|EEI09754.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus reuteri MM2-3]
 gi|227184838|gb|EEI64909.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus reuteri CF48-3A]
 gi|300892996|gb|EFK86355.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|324978523|gb|EGC15472.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 233

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/202 (24%), Positives = 105/202 (51%), Gaps = 2/202 (0%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF  G++++L  T L R   ++ G  + L +I++F ++   +  L+   + + F  
Sbjct: 23  LAIISFFFGLIIALV-TALIRLSRQR-GAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L     +        F +  I  S  T A+ +E +R+ + +VP GQ EA  A+G+T  
Sbjct: 81  PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAISSVPTGQWEAGAAIGMTRL 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA+R  +PPL++ +++L+K++SLA ++   ++ +V   I  +  Q + +  
Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200

Query: 369 IWMFIYLSLSIMIALFMNRLNA 390
           +   +Y   + +++ F   L  
Sbjct: 201 LVAMVYAVFTTVLSYFQGYLER 222



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----LVAWICRVYVEVFRNIPPLVV 144
           +  GF  T  LA        II  +    RLS  +    ++ WI   YV +FR+ P LV 
Sbjct: 13  LAAGFKYTIPLAIISFFFGLIIALVTALIRLSRQRGAFMILKWIASFYVWLFRSTPLLVQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           +F ++  +  +         +    F 
Sbjct: 73  LFIVFFGLPYLRIKGVLPHGIKLEPFT 99


>gi|71736000|ref|YP_274549.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556553|gb|AAZ35764.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 324

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +     L   V S+   P     +    F +   L     T+       VFS +L
Sbjct: 42  RWVGSIFAALVLVAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTVFSIIL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G  L+L     +R        AL   YI  F       +++I   +   +D  VLG    
Sbjct: 102 GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 DLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 VFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTLLTSAQYYVERHFARGTAR 304



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLAQTLLLTLLSTVFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|289450823|ref|YP_003475334.1| putative arginine ABC transporter permease ArtQ [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289185370|gb|ADC91795.1| putative arginine ABC transporter, permease protein ArtQ
           [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 229

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 109/232 (46%), Gaps = 13/232 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +  L F        L     T+  +    +F F+LG+ ++       R            
Sbjct: 5   NSWLSFLAKWGGMYLHGTLTTLQLSFFGVLFGFILGLFIAFM-----RGSRSPFLSVPAK 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YI  F   G P LV + + Y   F   +  ++N++         +   IA+   ++A++
Sbjct: 60  IYIQIF--RGTPLLVQVLIAYY-GFASVIPNEYNYLKN-----PLVLSLIAICMNSSAYV 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E++RSG+ +V RGQ EAA +LG+  ++    ++LPQA+++++P L ++++ L+K S++ 
Sbjct: 112 SEVIRSGINSVDRGQFEAASSLGMKKKQIMYYIILPQAIKTVLPALGNEFITLIKESAIV 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             VG  DL+         T +     +    IYL L  +++  ++    ++A
Sbjct: 172 AFVGIGDLMYQAKIAQGSTLKPFMPYVTAALIYLVLVTVLSKVISLFERRLA 223



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 37/74 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    L G + T  L+F G++   I+G  +   R S +  ++   ++Y+++FR  P LV 
Sbjct: 14  WGGMYLHGTLTTLQLSFFGVLFGFILGLFIAFMRGSRSPFLSVPAKIYIQIFRGTPLLVQ 73

Query: 145 IFFLYKSVLSVLPI 158
           +   Y    SV+P 
Sbjct: 74  VLIAYYGFASVIPN 87


>gi|191637481|ref|YP_001986647.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei BL23]
 gi|239629529|ref|ZP_04672560.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|190711783|emb|CAQ65789.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei BL23]
 gi|239528215|gb|EEQ67216.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327381526|gb|AEA53002.1| Polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus casei LC2W]
 gi|327384689|gb|AEA56163.1| Polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus casei BD-II]
          Length = 237

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 5/210 (2%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      F    ++ ++ +L    + + F     K     Y+  F     P LV + +
Sbjct: 19  YTIPIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLF--RSTPLLVQLFI 76

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +   F  P L               ++  I  S  T A+ AE +R+ L+++  GQ EAA
Sbjct: 77  VF---FGLPSLIIPGIFPHGIKLDPVVAGIITFSLNTGAYCAETIRAALLSIDHGQWEAA 133

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++GL  R   R +++PQA+R+ +PPL++ +++L+K++SLA ++   ++  V   I  + 
Sbjct: 134 YSVGLPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQVSQQIAAEN 193

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            Q + +  +   +Y  +   +      L  
Sbjct: 194 YQPLLMYSLVALLYAVVCTALTWGQRYLEK 223


>gi|30260795|ref|NP_843172.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47777838|ref|YP_017269.2| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183633|ref|YP_026885.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|52144670|ref|YP_082158.1| glutamine ABC transporter permease [Bacillus cereus E33L]
 gi|165872951|ref|ZP_02217574.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167635148|ref|ZP_02393464.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|167640890|ref|ZP_02399148.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|170689011|ref|ZP_02880211.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|170708477|ref|ZP_02898919.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|177652812|ref|ZP_02935185.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190568537|ref|ZP_03021443.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196041831|ref|ZP_03109120.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|227816489|ref|YP_002816498.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228913330|ref|ZP_04076963.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228925829|ref|ZP_04088913.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|229120291|ref|ZP_04249541.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 95/8201]
 gi|229601249|ref|YP_002865239.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|254684282|ref|ZP_05148142.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CNEVA-9066]
 gi|254722086|ref|ZP_05183875.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A1055]
 gi|254738746|ref|ZP_05196449.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Western North America USA6153]
 gi|254742042|ref|ZP_05199729.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Kruger B]
 gi|254754972|ref|ZP_05207006.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Vollum]
 gi|254762297|ref|ZP_05214141.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Australia 94]
 gi|30254244|gb|AAP24658.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47551543|gb|AAT29744.2| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177560|gb|AAT52936.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|51978139|gb|AAU19689.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus E33L]
 gi|164711305|gb|EDR16859.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167511110|gb|EDR86498.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|167529407|gb|EDR92158.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|170126598|gb|EDS95483.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|170666996|gb|EDT17759.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|172081846|gb|EDT66915.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190560331|gb|EDV14310.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196027325|gb|EDX65943.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|227003240|gb|ACP12983.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228663101|gb|EEL18691.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 95/8201]
 gi|228833844|gb|EEM79397.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228846239|gb|EEM91258.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229265657|gb|ACQ47294.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
          Length = 218

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG+VL++      R           L ++ T  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRI----------LNWLGTAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|66046122|ref|YP_235963.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256829|gb|AAY37925.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 329

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +     L   V S+   P     +    F +   L     T+       +FS +L
Sbjct: 42  RWIGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTLFSIIL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----G 252
           G  L+L     +R        AL   YI  F       +++I   +   +D  VL     
Sbjct: 102 GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156

Query: 253 QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           Q  F   STV    +F    + LS   +A+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 QLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTVLTSAQYYVERHFARGSAR 304



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|328910284|gb|AEB61880.1| cystine ABC transporter (permease), membrane protein [Bacillus
           amyloliquefaciens LL3]
          Length = 229

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 15/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +        +  +  +  + + SF+ G++++L  T L+R  + K  + +  +Y+S  
Sbjct: 12  WDLVQQSFWPILSGGIYYSIPLTILSFIFGMIIALI-TALARMSNMKPLRWVFSVYVSA- 69

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            + G P LV + + + L           F   +     F S  IA S    A+ +EI+R+
Sbjct: 70  -VRGTPLLVQLFIIFYL-----------FPTFNITLDPFPSAVIAFSLNVGAYASEIIRA 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VP+GQ EA   +G+T+RK    V+LPQA R  IPPL++ +++L+K++SLA  +  A
Sbjct: 118 SISSVPKGQWEAGYTIGMTYRKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVA 177

Query: 348 DLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      I  Q   Q + I +   FIY  +  ++++    +  ++   
Sbjct: 178 ELFRKAQEIGAQNLDQILVIYIEAAFIYWIICFLLSIVQLVIERRLDRY 226



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 32/91 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G   +  L     I   II  +    R+S  K + W+  VYV   R  P 
Sbjct: 16  QQSFWPILSGGIYYSIPLTILSFIFGMIIALITALARMSNMKPLRWVFSVYVSAVRGTPL 75

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++    +     D          LN
Sbjct: 76  LVQLFIIFYLFPTFNITLDPFPSAVIAFSLN 106


>gi|312866757|ref|ZP_07726971.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus parasanguinis F0405]
 gi|311097838|gb|EFQ56068.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus parasanguinis F0405]
          Length = 218

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/221 (28%), Positives = 117/221 (52%), Gaps = 11/221 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + LS   +T+      F  + V+G++  +F+         K  +    +++   +I G
Sbjct: 8   YKQLLSGLGVTLALALLSFAIAMVIGVIFGMFS-----VSPYKWLRWTAEIFVD--VIRG 60

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P ++L A  +      P L + +  G  +   +F++  IALS   AA+IAEIVR G+ A
Sbjct: 61  IPLMILAAFIFW---GIPNLIE-SVTGHQSPINDFVAGTIALSLNAAAYIAEIVRGGIQA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQMEA+ +LG+++ K  R ++LPQA + ++P   +Q++  LK++++  A+G  +L  
Sbjct: 117 VPAGQMEASRSLGISYGKTMRKIILPQATKLMLPNFVNQFVIALKDTTIVSAIGLVELFQ 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  II +  Q+ ++  I    YL +  ++  F  +L  K+
Sbjct: 177 TGKIIIARNYQSFKMYAILAVFYLVIITLLTRFAKKLEKKV 217



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K + W   ++V+V R IP +++  F+
Sbjct: 11  LLSGLGVTLALALLSFAIAMVIGVIFGMFSVSPYKWLRWTAEIFVDVIRGIPLMILAAFI 70

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 71  FWGIPNLIESVTGHQSP 87


>gi|227488107|ref|ZP_03918423.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227541504|ref|ZP_03971553.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227091969|gb|EEI27281.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227182786|gb|EEI63758.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 299

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 6/264 (2%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +   +++      V S      +     F   L+ R       T+       V   V
Sbjct: 16  WRWVFATILLILFALFVFSAARNEAYGWDTYFQYLLDKRIAIASLHTIALTIIAMVIGVV 75

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG +L++      R         L  +Y+  F    +   ++        +    LG   
Sbjct: 76  LGAILAVL-----RMSPNPVLSGLSWIYLWIFRGTPIYVQLVFWGLLGSIYQTINLGFAE 130

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F     +S  F+   + L    AA++AE+VR+GL AVP GQ EA+ ALG++  +  +  +
Sbjct: 131 FDLQGFLSNMFLLACLGLGLNEAAYMAEVVRAGLQAVPEGQYEASKALGMSWWQTMKRTV 190

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIY 374
           LPQAMR IIPP  ++ +++LK +SL VAV +  +L      I     + + ++L+    Y
Sbjct: 191 LPQAMRIIIPPTGNELISMLKTTSLVVAVPYTYELYGKATDISYSLFEPVPLLLVAATWY 250

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           ++++ ++ +  + L         +
Sbjct: 251 IAITSVLMIAQSYLEKYYERGATR 274



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 83  SSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +Y   +L     +  ++T  L    M+   ++G ++   R+S N +++ +  +Y+ +FR
Sbjct: 44  DTYFQYLLDKRIAIASLHTIALTIIAMVIGVVLGAILAVLRMSPNPVLSGLSWIYLWIFR 103

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
             P  V + F          I           FL+N  L   
Sbjct: 104 GTPIYVQLVFWGLLGSIYQTINLGFAEFDLQGFLSNMFLLAC 145


>gi|196047168|ref|ZP_03114385.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218901837|ref|YP_002449671.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|229182975|ref|ZP_04310207.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BGSC 6E1]
 gi|196022038|gb|EDX60728.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218535045|gb|ACK87443.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|228600432|gb|EEK58020.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BGSC 6E1]
          Length = 218

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG+VL++      R           L ++ T  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRI----------LNWLGTAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|91784321|ref|YP_559527.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|91688275|gb|ABE31475.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 265

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 12/249 (4%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           +   P     +PF +             +         + +LG V+ +    LS      
Sbjct: 1   MPHAPHLVFDMPFFLHFVFDPRPALLQGLVVTVLGAAIAQLLGTVIGVVLG-LSGMHRAL 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI------GGSTVSPEFMS 268
             + L   YI  F   G P LV + L Y   F  P L  F+        G   +S   ++
Sbjct: 60  PLRVLNQGYIWFF--RGTPVLVQLVLIY---FGLPYLVGFDLFPAVMSLGPLHLSGALVA 114

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA   + AA+++EI R+ + ++  GQMEAA+A+G+T   A R ++LPQA+  I+P L 
Sbjct: 115 GVIAFGLHEAAYMSEITRASVGSIDPGQMEAALAVGMTPAMAMRRIVLPQAVPLIVPALG 174

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q+ N+LK ++L   +G +++  V   +   T    E+ L     YL L+ +     + L
Sbjct: 175 NQFNNMLKTTALLSVIGVSEMFRVAEQMQAATFMTFEVYLGVSVYYLMLTGVWTFIQHGL 234

Query: 389 NAKIALKEK 397
            + ++   +
Sbjct: 235 ESWLSRGGR 243



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T   A    +  T+IG ++G   +     +  + + Y+  FR  P LV +  
Sbjct: 24  ALLQGLVVTVLGAAIAQLLGTVIGVVLGLSGMHRALPLRVLNQGYIWFFRGTPVLVQLVL 83

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFL 171
           +Y  +  ++       V+  G   
Sbjct: 84  IYFGLPYLVGFDLFPAVMSLGPLH 107


>gi|170693259|ref|ZP_02884419.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170141789|gb|EDT09957.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 605

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 11/251 (4%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SVL  P     +    FL+   LS    T+   A      F LG++++L     +R    
Sbjct: 53  SVLGNPRWGWGVFAEWFLSEPVLSGLGRTLLLTALGASIGFALGMLIAL-----ARVSRS 107

Query: 214 KTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVLGQ-FNFIGGSTVSPEFM 267
                   +++  F    L  L+LI      L   +    P  G  F     + V   F 
Sbjct: 108 PLLAGSAWVFVWLFRSIPLIVLLLILNNLGYLYETISIGIPFTGIAFGNWPTTEVVSPFC 167

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+ + AAF AE++R G+ +V +GQ+EAA ALGL   +  R ++LPQAMR+I+P  
Sbjct: 168 AAVLGLTLHHAAFSAEVIRGGIQSVDQGQLEAAAALGLPRLRQARRIVLPQAMRAIVPTA 227

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  ++L K S++   +   +L      I  +  + I ++++    YL +  +++     
Sbjct: 228 FNDLISLAKGSAMVYVLAMPELFYTVQIIYRRNLEVIPLLMVATVWYLIILSVLSAIQVY 287

Query: 388 LNAKIALKEKK 398
           +    +    +
Sbjct: 288 VERYFSRGATR 298



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           L G   T  L   G      +G L+   R+S + L+A    V+V +FR+IP
Sbjct: 75  LSGLGRTLLLTALGASIGFALGMLIALARVSRSPLLAGSAWVFVWLFRSIP 125


>gi|189423808|ref|YP_001950985.1| polar amino acid ABC transporter inner membrane protein [Geobacter
           lovleyi SZ]
 gi|189420067|gb|ACD94465.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           lovleyi SZ]
          Length = 515

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 15/206 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   I VF+ + G +L        R    +   A   LYI   ++ G P LVL+ L + +
Sbjct: 312 TTVVISVFATLFGTLLGALIC-FMRMAKSRLLSAPARLYI--AILRGTPVLVLLMLIFYV 368

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F             S      +   IA      A+ AEI R+G+  V +GQ EA I+LG
Sbjct: 369 VF------------ASININPVIVAVIAFGMNFGAYTAEIFRTGIEGVEKGQTEAGISLG 416

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T       ++LPQ +R I+P    ++++L+K +S+   +   DL      I ++T  A 
Sbjct: 417 FTRTSTFLHIVLPQMVRRILPVYKGEFISLVKMTSIVGYIAVQDLTKASDIIRSRTFDAF 476

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
             +++   +Y  +S  +   +  L  
Sbjct: 477 FPLVMVAILYFLISWTLMQSLEYLER 502



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++    +  T++G L+   R++ ++L++   R+Y+ + R  P LV++  +
Sbjct: 306 ILDGLKTTVVISVFATLFGTLLGALICFMRMAKSRLLSAPARLYIAILRGTPVLVLLMLI 365

Query: 149 YKSVL-SVLPIPDHSIVLPFGM 169
           +  V  S+   P    V+ FGM
Sbjct: 366 FYVVFASININPVIVAVIAFGM 387


>gi|116516598|ref|YP_816212.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|149021689|ref|ZP_01835720.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|116077174|gb|ABJ54894.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|147930150|gb|EDK81136.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|301793968|emb|CBW36365.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae INV104]
          Length = 227

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTILISICVIFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++EIVR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSEIVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 227



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           I   +  +    P     I+      L    L     +    ++I 
Sbjct: 69  IMIAFALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSEIV 114


>gi|306821309|ref|ZP_07454919.1| polar amino acid ABC superfamily ATP binding cassette transporter
           permease [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550650|gb|EFM38631.1| polar amino acid ABC superfamily ATP binding cassette transporter
           permease [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 204

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 13/217 (5%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+  +    +   ++G+VL+ F     R    K    +   YI   LI G P L  I 
Sbjct: 1   MYTIGLSLVSVLMGILIGLVLAFF-----RLSKAKILNLISTTYIE--LIRGTPLLAQIM 53

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L     +D         I      P+     IA+S  + A++ EI+RSG+ +V +GQMEA
Sbjct: 54  LVKFGLYDLITAKTKISI------PDIAIGIIAVSLNSGAYVCEIIRSGISSVDKGQMEA 107

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             +LG++     RL++LP A+++I+P L ++++ ++K +S+   +G  DL  +   + + 
Sbjct: 108 GRSLGMSKSMTMRLIVLPLAVKNILPALCNEFVTVIKETSIISYIGVTDLFYIANAVSSM 167

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           T ++ E +L    IY  ++  ++  +  L  +++  +
Sbjct: 168 TYKSFESMLAVALIYFIITFTLSKLVRLLERRLSQSD 204



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           T  L+   ++   +IG ++   RLS  K++  I   Y+E+ R  P L  I  +   + 
Sbjct: 3   TIGLSLVSVLMGILIGLVLAFFRLSKAKILNLISTTYIELIRGTPLLAQIMLVKFGLY 60


>gi|224372631|ref|YP_002607003.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Nautilia profundicola AmH]
 gi|223588694|gb|ACM92430.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Nautilia profundicola AmH]
          Length = 237

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 16/245 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFH 212
             +       +      +     T+  +    +FSF++G ++ +      F   L   ++
Sbjct: 1   MGYEFDWGVLIEYKGLLIQGLITTVKLSILGILFSFLIGSIVGIGRASKNFWLSLFASYY 60

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            ++ + +PL+    F+ F           + L    P L  +           F S  +A
Sbjct: 61  VESFRNIPLIVQMFFIYF----------TFTLSQIFPFLNSWGEFLHIQDVDAFFSALLA 110

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  YT A+I E+V++G+ ++P+GQ EAA +LG+   +    ++ PQA+R IIPPLTSQ+L
Sbjct: 111 LILYTGAYIGEVVKAGINSIPKGQFEAAQSLGMNRFQVMWYIIYPQAIRIIIPPLTSQFL 170

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NL+KNSSLA+ +G A+L      I  +T +  E       +Y+ L++  + FMN +  K 
Sbjct: 171 NLIKNSSLAMTIGVAELTFATQQIDAETFRGFEAATAVTILYIFLTLTTSFFMNLIEIKF 230

Query: 393 ALKEK 397
           +   K
Sbjct: 231 SKGVK 235



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 49/107 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G + T  L+  G++ + +IG++VG GR S N  ++     YVE FRNIP +V 
Sbjct: 13  YKGLLIQGLITTVKLSILGILFSFLIGSIVGIGRASKNFWLSLFASYYVESFRNIPLIVQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +FF+Y +       P  +    F    +        L +      ++
Sbjct: 73  MFFIYFTFTLSQIFPFLNSWGEFLHIQDVDAFFSALLALILYTGAYI 119


>gi|330821184|ref|YP_004350046.1| hypothetical protein bgla_2g20990 [Burkholderia gladioli BSR3]
 gi|327373179|gb|AEA64534.1| hypothetical protein bgla_2g20990 [Burkholderia gladioli BSR3]
          Length = 238

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 14/225 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L            + V +  LG V  L    L R       + +  +YI  F   G 
Sbjct: 9   WPYLPVLLKAALLTIFLAVVTQCLGTVGGLAL-ALMRGARNPLPRVVAFVYIWVF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y       +  +              +  +A+S  +AA+ AEI+R+G+ AV
Sbjct: 66  PVLLHLFFVYYAAPLVGLRLE-----------ALPAAIVAMSMSSAAYNAEIIRAGIQAV 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ+EAA ALG+      R V+LPQA R ++PP    +++  KN+SLA  +   +L+  
Sbjct: 115 PRGQVEAAQALGMGWPGIHRHVVLPQAARIVLPPYVGNFISHTKNTSLASVITVPELMLQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             TI + T +A+E + I   IYL ++ ++     RL    A   +
Sbjct: 175 AQTIYSSTYRAVETLTIAGAIYLGITTVLTFAQLRLERSGAAGRR 219



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     Y   +L   + T +LA       T+ G  +   R + N L   +  VY+ VF
Sbjct: 3   IDFNQIWPYLPVLLKAALLTIFLAVVTQCLGTVGGLALALMRGARNPLPRVVAFVYIWVF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P L+ +FF+Y +   V
Sbjct: 63  RGTPVLLHLFFVYYAAPLV 81


>gi|289647160|ref|ZP_06478503.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 324

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +     L   V S+   P     +    F +   L     T+       VFS +L
Sbjct: 42  RWVGSIFAALVLVAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTVFSIIL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G  L+L     +R        AL   YI  F       +++I   +   +D  VLG    
Sbjct: 102 GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 DLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 VFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL +++++      +    A    +
Sbjct: 277 TVWYLIITMLLTSAQYYVERHFARGTAR 304



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLAQTLLLTLLSTVFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|320333845|ref|YP_004170556.1| polar amino acid ABC transporter inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
 gi|319755134|gb|ADV66891.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
          Length = 219

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 14/204 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + +LG+ L+ F   L R       + L  LY+S   I G P LV I + Y        
Sbjct: 26  VGAMLLGLPLA-FLVALGRSAPWPPVRWLLDLYVSF--IRGTPLLVQIFVLYY------- 75

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                  G         S   ALS   AA+++  +R+ L AV RGQ EAA +LGL+  + 
Sbjct: 76  ----GLPGLGVTLDPVTSGVAALSLNVAAYMSVTIRASLDAVGRGQREAARSLGLSSSQT 131

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+R  +P L +  + L+K++SL   +   +L+     +I +T +     L  
Sbjct: 132 MRFVVLPQALRIGLPSLMNSLIGLIKDTSLVSVITVTELLRSAQLVIARTFEPFGPYLAA 191

Query: 371 MFIYLSLSIMIALFMNRLNAKIAL 394
             IY  +S ++ L  +RL  ++  
Sbjct: 192 ALIYWLISSLLGLVQSRLERRLHR 215



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 41/117 (35%), Gaps = 6/117 (5%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I Q ++           +L G   T   A   M+    +  LV  GR +    V W+  
Sbjct: 2   NITQSMIDALP------VLLTGARITVLYAVGAMLLGLPLAFLVALGRSAPWPPVRWLLD 55

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +YV   R  P LV IF LY  +  +    D        + LN       T+    +A
Sbjct: 56  LYVSFIRGTPLLVQIFVLYYGLPGLGVTLDPVTSGVAALSLNVAAYMSVTIRASLDA 112


>gi|302669342|ref|YP_003832492.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus
           B316]
 gi|302397006|gb|ADL35910.1| amino acid ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 228

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 118/232 (50%), Gaps = 17/232 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-- 227
           F+           +    ++  F+ +LGI++      L +    + G+   L YI++   
Sbjct: 11  FITGERWKLYLSGLGITLEVAFFAGILGILIGTL-MALMKLSTTEDGRPTILNYIASVYV 69

Query: 228 -LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P+++ + + +             FI  ++ +   +   ++    + A+++EIVR
Sbjct: 70  DVIRGTPSVLQLLIMW-------------FIIMASSNNGILVASLSFGINSGAYVSEIVR 116

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++AV +GQMEA  +LGL+     R ++LPQA+++IIPPL ++++ L+K +++   V  
Sbjct: 117 AGILAVDKGQMEAGRSLGLSKATTMRYIILPQAIKNIIPPLGNEFITLIKETAIVGYVSL 176

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            DL  V   I ++T  A   ++    IY  +  ++++F+ +L  ++   + +
Sbjct: 177 TDLTRVANQIASRTYDAFMPLIGAAVIYFVIIKLLSIFLEKLERRMRRSDNR 228



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAWICRVYVEVFRNIP 140
               L G   T  +AF   I   +IGTL+   +LS        ++ +I  VYV+V R  P
Sbjct: 17  WKLYLSGLGITLEVAFFAGILGILIGTLMALMKLSTTEDGRPTILNYIASVYVDVIRGTP 76

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            ++ +  ++  +++          L FG+
Sbjct: 77  SVLQLLIMWFIIMASSNNGILVASLSFGI 105


>gi|315924300|ref|ZP_07920523.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622371|gb|EFV02329.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 215

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 8/223 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +           ++ + + V G +L +    L R  H K   A+   Y+  F   G P L
Sbjct: 1   MWAIFSGTVLTIEVAIVAVVFGAILGIVV-ALGRISHNKVANAVTWFYVWFF--RGTPLL 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + + Y   F  P++   N  G + V       ++  S  + A++AEI+R+ + ++P G
Sbjct: 58  LQLFIVY---FAVPIIY-LNATGSTFVIDPMFCAFVTFSLNSTAYMAEIIRAAIESIPEG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ALG+++ +A R +++PQ  + ++ PL ++ + LLK++SL   +   D++    T
Sbjct: 114 QMEAAKALGMSYHQAMRKIIIPQTFKRLVAPLGNELIMLLKDTSLVSTIALFDVLRTVKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + + TG  I   L    IYL L+ ++ +  ++L  +    E++
Sbjct: 174 MASSTGNWI-YYLYAAAIYLFLTTILQVIFDKLETRFGAYERR 215



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 40/85 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             AI  G V T  +A   ++   I+G +V  GR+S NK+   +   YV  FR  P L+ +
Sbjct: 1   MWAIFSGTVLTIEVAIVAVVFGAILGIVVALGRISHNKVANAVTWFYVWFFRGTPLLLQL 60

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMF 170
           F +Y +V  +      S  +   MF
Sbjct: 61  FIVYFAVPIIYLNATGSTFVIDPMF 85


>gi|299537491|ref|ZP_07050785.1| polar amino acid ABC transporter, inner membrane subunit
           [Lysinibacillus fusiformis ZC1]
 gi|298727052|gb|EFI67633.1| polar amino acid ABC transporter, inner membrane subunit
           [Lysinibacillus fusiformis ZC1]
          Length = 231

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 15/214 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S  +  V+ L      +  + K  +++   YI  F++ G+P +V +   Y  
Sbjct: 24  LTIELTIVSLFIACVIGLV-FAFFKVSNIKILESIANAYI--FVVRGMPLIVQLMFLYY- 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I       +F +  IAL  ++ A+IAEI R  + ++ +GQMEA  +LG
Sbjct: 80  -----------GISSIFTLSDFAAGSIALGIHSGAYIAEIFRGSIQSIDKGQMEAGRSLG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ K  R ++LPQ+ +  IP L +Q++  LK+SSL   +  ++L +   +        +
Sbjct: 129 MTYFKTMRRIILPQSFKRAIPALANQFIIGLKDSSLVAYIAVSELFNHALSTQAYNYMPL 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E   +    YL L ++  L  N+L +++ +  +K
Sbjct: 189 ETYFVVGIYYLILVLLFTLLFNKLESRLDVGRRK 222



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    L   V T  L    +  A +IG +    ++S  K++  I   Y+ V R +P +V 
Sbjct: 14  HGIEFLKATVLTIELTIVSLFIACVIGLVFAFFKVSNIKILESIANAYIFVVRGMPLIVQ 73

Query: 145 IFFLYKSVLSVL 156
           + FLY  + S+ 
Sbjct: 74  LMFLYYGISSIF 85


>gi|298486874|ref|ZP_07004930.1| Amino acid ABC transporter permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298158741|gb|EFH99805.1| Amino acid ABC transporter permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320324338|gb|EFW80417.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320328539|gb|EFW84541.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 324

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +     L   V S+   P     +    F +   L     T+       VFS +L
Sbjct: 42  RWVGSIFAALVLVAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTVFSIIL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G  L+L     +R        AL   YI  F       +++I   +   +D  VLG    
Sbjct: 102 GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 DLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 VFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTLLTSAQYYVERHFARGTAR 304



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLAQTLLLTLLSTVFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|169826265|ref|YP_001696423.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168990753|gb|ACA38293.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 227

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+       +  F++GI+L+L      +    K  +     Y S F   G 
Sbjct: 21  PYILKGIGVTLQIAIGASIIGFIVGILLALC-----KIGKVKVLRWFADFYTSIF--RGT 73

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   +  P L                +  IA    + A+I+EI+R+G+ AV
Sbjct: 74  PLVLQLLIIY---YAVPQL-------LDIQIEPIPTAIIAFGLNSGAYISEIIRAGINAV 123

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEAA ALG+ + K  + +++PQA+++I+P L ++++ L K +++   +   D++  
Sbjct: 124 DKGQMEAAQALGIPYAKMMKDIIIPQAVKNILPSLVNEFITLNKETAVVTVISALDIMRR 183

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   T + +E +L    IY  +++++     R+   +   +
Sbjct: 184 AYIVGGSTYRYLEPLLFAGIIYYLMTLVLTFLGKRIEKGMRKSD 227



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 3/96 (3%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T+       IL G   T  +A    I   I+G L+   ++   K++ W    Y  +F
Sbjct: 11  LDFTAIVPSIPYILKGIGVTLQIAIGASIIGFIVGILLALCKIGKVKVLRWFADFYTSIF 70

Query: 137 RNIPPLVVIFFLYKSV---LSVLPIPDHSIVLPFGM 169
           R  P ++ +  +Y +V   L +   P  + ++ FG+
Sbjct: 71  RGTPLVLQLLIIYYAVPQLLDIQIEPIPTAIIAFGL 106


>gi|86150643|ref|ZP_01068865.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596538|ref|ZP_01099775.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|205356665|ref|ZP_03223426.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|218562559|ref|YP_002344338.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|85838904|gb|EAQ56171.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191379|gb|EAQ95351.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360265|emb|CAL35060.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|205345403|gb|EDZ32045.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni CG8421]
 gi|284926173|gb|ADC28525.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315927897|gb|EFV07220.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929286|gb|EFV08498.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 261

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L   YI   L+ G P LV + L Y +  
Sbjct: 68  LIISFFSLLLSIILGGVFCAFS-LSSIVFLRFLSTFYIE--LVRGTPLLVQVLLIYYIIA 124

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 125 NNLGLDN-----------RYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLK 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 174 EMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 233

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I++F   L  K
Sbjct: 234 YVILAITYLVLTLPISIFSRYLERK 258



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 44/87 (50%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 40  SFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFL 99

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 100 STFYIELVRGTPLLVQVLLIYYIIANN 126


>gi|330448488|ref|ZP_08312136.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492679|dbj|GAA06633.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 272

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 73/272 (26%), Positives = 127/272 (46%), Gaps = 19/272 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             +++ + ++ V  F  +  L               +P +      G + +   +    +
Sbjct: 16  KPVISGLLQITVIAFAIMWLLNSGADAMNYHWQWYRVPQYLFFKEDGEWFSAELIDGLLI 75

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +A   +F+ + G++ +L      R  H   G+ L   YI   LI   P LV I L 
Sbjct: 76  TLKISAISLIFTVLFGLITALL-----RVSHSVVGRGLARGYIE--LIRNTPLLVQIYLL 128

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +ALS +  A+ AEI R+GLI +P+GQ EAA 
Sbjct: 129 YFVF------------GPMLGLERFTTAVLALSLFQGAYTAEIFRAGLINIPKGQFEAAE 176

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+   + R ++LPQ +R I+PPLT++ ++L+KNSS+   +   DL + G  I+  T 
Sbjct: 177 SLGLSKMDSYRYIILPQMLRRILPPLTNEAVSLVKNSSIVSIMAIFDLTTQGRDIVADTA 236

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              EI      +YL ++++++     L  K+A
Sbjct: 237 MPFEIWFTIAAMYLCITLLLSALATLLEHKLA 268



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 79  YTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +  D  + +A ++ G + T  ++   +I   + G +    R+S + +   + R Y+E+ R
Sbjct: 58  FKEDGEWFSAELIDGLLITLKISAISLIFTVLFGLITALLRVSHSVVGRGLARGYIELIR 117

Query: 138 NIPPLVVIFFLYKSV 152
           N P LV I+ LY   
Sbjct: 118 NTPLLVQIYLLYFVF 132


>gi|322834313|ref|YP_004214340.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169514|gb|ADW75213.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 274

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 18/251 (7%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
             K  L    I      L       +  +    LT+   A    F  ++G++     T L
Sbjct: 42  FSKMGLDWSLIGQKLPFLLGLRLSPDGFIQGAALTIMITACSMFFCLLIGLI-----TAL 96

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R             Y S F   G P LV + + Y        L Q   + G        
Sbjct: 97  GRMSENALAFGCATFYASLF--RGTPLLVQVLIIYL------ALPQVGIVLG-----ALS 143

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  IALS    A++AE +RSG+++VPRGQ EAA+ALG++       V  PQA+R IIPP 
Sbjct: 144 SGIIALSMNYGAYLAETIRSGVLSVPRGQQEAALALGVSRWTVAVHVTAPQALRIIIPPA 203

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            S ++++LK+SSL   +G  +L  +  +    T + +E++     IY  +SI++ L  +R
Sbjct: 204 GSMFISMLKDSSLVSLMGLWELNFLAQSYGRSTYRYMEMLATAAAIYWIMSIVLELLQSR 263

Query: 388 LNAKIALKEKK 398
           L  + A   ++
Sbjct: 264 LERRFAQGHRR 274



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 13/165 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  +    M    +IG +   GR+S N L       Y  +FR  P LV +  +
Sbjct: 69  FIQGAALTIMITACSMFFCLLIGLITALGRMSENALAFGCATFYASLFRGTPLLVQVLII 128

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG---IVLSLFAT 205
           Y ++  V  +          + +N       T+         V S   G     L+L  +
Sbjct: 129 YLALPQVGIVLGALSSGIIALSMNYGAYLAETIRSG------VLSVPRGQQEAALALGVS 182

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPT----LVLIALKYQLHF 246
           R +   H    +AL ++      +F        LV +   ++L+F
Sbjct: 183 RWTVAVHVTAPQALRIIIPPAGSMFISMLKDSSLVSLMGLWELNF 227


>gi|251799197|ref|YP_003013928.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247546823|gb|ACT03842.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 262

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 117/235 (49%), Gaps = 7/235 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-VLSLFATRLSRHFHEKTGKALPLLY 223
           + +G  +N      P L    N  + + +  +G+ +L  F   L R ++    + + ++Y
Sbjct: 1   MEYGFDINYVFDFIPKLLSTLNITLLIVAGAIGLGLLVGFLVALPRLYNVPVLRNVSMVY 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +S F   G P L+ + L Y   +  P + +   I  S + P    + +       A+++E
Sbjct: 61  VSFF--RGTPVLIQLFLFY---YGLPEILKLVSIDISKL-PVLYFVILTFGLNVGAYVSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ ++AV RGQ+EAA A+G+T  +A   ++LPQA+   +P  T+  + +LK++SLA  
Sbjct: 115 TIRAAVLAVNRGQVEAAYAVGMTGYQAFTRIVLPQAVGIAVPVFTNLVIAMLKDTSLAFT 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  ++     T+ + +   IE  +    IYL +SI++   M     +++   ++
Sbjct: 175 LGVMEMTGKAQTLGSLSQHFIETYIALALIYLVMSIVLERLMLLAERRLSRHLRR 229



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF+I+  +  +         +L     T  +    +    ++G LV   RL    ++  +
Sbjct: 4   GFDINY-VFDFIPK------LLSTLNITLLIVAGAIGLGLLVGFLVALPRLYNVPVLRNV 56

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
             VYV  FR  P L+ +F  Y  +  +L +    I     ++ 
Sbjct: 57  SMVYVSFFRGTPVLIQLFLFYYGLPEILKLVSIDISKLPVLYF 99


>gi|322376376|ref|ZP_08050869.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282183|gb|EFX59190.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 227

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K       LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTVLISICVVFLGTILGVVL-AFGQRSKFKPLVWFANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQVGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +     ++   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKRMGQGDKK 227



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 36/97 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W   +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTVLISICVVFLGTILGVVLAFGQRSKFKPLVWFANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           I   +  +    P     I+      L    L     
Sbjct: 69  IMIAFALMHINAPTIQVGILGVDFSRLIPGILIISMN 105


>gi|317153460|ref|YP_004121508.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943711|gb|ADU62762.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 273

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 19/241 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
                IP +   +    F+    L    +T+   A        +G++ +L      R   
Sbjct: 48  WQWYQIPKYLWRVTDQGFVWGPLLQGLGVTLRITALSMGLMLGIGLITALM-----RMSS 102

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + +   Y+   LI   P L+ I   Y +            I        F +  IA
Sbjct: 103 SLAARGVARGYME--LIRNSPLLIQIFFIYFV------------IAPILDISAFWAAIIA 148

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS +  A+ +EI+R+G+ ++  GQ EAA +LG++     R ++LPQA+R ++PPLTSQ +
Sbjct: 149 LSLFEGAYASEILRAGISSIASGQWEAAQSLGMSPYAMYRHIILPQAVRRVLPPLTSQAV 208

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L+K+S+L   +   DL   G  I  +T    EI      +YL++++ ++  +  L  + 
Sbjct: 209 SLVKDSALVSTIAIMDLTQQGRMIDAETFLTFEIWFTVAAVYLAVTLALSGTVRLLERRY 268

Query: 393 A 393
           A
Sbjct: 269 A 269



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 37/83 (44%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           ++I + +   T        +L G   T  +    M     IG +    R+S++     + 
Sbjct: 51  YQIPKYLWRVTDQGFVWGPLLQGLGVTLRITALSMGLMLGIGLITALMRMSSSLAARGVA 110

Query: 130 RVYVEVFRNIPPLVVIFFLYKSV 152
           R Y+E+ RN P L+ IFF+Y  +
Sbjct: 111 RGYMELIRNSPLLIQIFFIYFVI 133


>gi|317048166|ref|YP_004115814.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949783|gb|ADU69258.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 223

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 13/230 (5%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++ F                    ++ + + ++   L             K    L   Y
Sbjct: 1   MVEFDFTPAFAAWPELLSGAWVTIEVTLCALLISCCLGTLIGLGRLTPQRKLVWWLCNSY 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +    + G P LV + + Y           F     + V P F+   I L CY+AA+++E
Sbjct: 61  VVF--VRGTPLLVQLFILY-----------FGLPYFNIVIPAFVCGIIGLGCYSAAYVSE 107

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR  ++++ RGQ EAA ++G++  +A RL++LPQA+  ++PPL ++++ L KNS+L   
Sbjct: 108 LVRGAILSIDRGQSEAARSMGMSAAQAMRLIILPQALVRMVPPLANEFIALTKNSALVSL 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           V   DL+  G  +I+ + +++E+ ++  FIYL ++    L +  +  K+ 
Sbjct: 168 VTIHDLMHEGQKVISVSYRSLEVYIVIAFIYLLMTSSTMLLLRVVEKKLR 217



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEVF 136
            +T   +    +L G   T  +    ++ +  +GTL+G GRL+   KLV W+C  YV   
Sbjct: 5   DFTPAFAAWPELLSGAWVTIEVTLCALLISCCLGTLIGLGRLTPQRKLVWWLCNSYVVFV 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHS 162
           R  P LV +F LY  +     +    
Sbjct: 65  RGTPLLVQLFILYFGLPYFNIVIPAF 90


>gi|241113462|ref|YP_002973297.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861670|gb|ACS59336.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 510

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 22/218 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   ++G+ L++     SR              I T +  GLP +V I +  Q 
Sbjct: 35  LAAASTVLGVIIGMALAVMGISQSRWLRLPA-------RIYTDVFRGLPAIVTILIIGQ- 86

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  F    +ALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 87  --------GFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            ++H +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 139 SMSHGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG  +  +L+    YL +++ +  F+N ++A++ L ++
Sbjct: 199 TGN-LSPLLLAGVFYLVITVPLTHFVNYIDARLRLGKQ 235



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG  NT  LA +  +   IIG  +    +S ++ +    R+Y +VFR +P +V I  + +
Sbjct: 27  VGLKNTLILAAASTVLGVIIGMALAVMGISQSRWLRLPARIYTDVFRGLPAIVTILIIGQ 86

Query: 151 SVLSVLPIPDHSIVLPFGMF 170
               +          P G+ 
Sbjct: 87  GFARIGREIFGPSPFPLGIL 106


>gi|167564805|ref|ZP_02357721.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia oklahomensis EO147]
 gi|167571973|ref|ZP_02364847.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia oklahomensis C6786]
          Length = 222

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A     S VLG+++ +      R F                 ++G  T  L   +   
Sbjct: 25  VTAAALALSCVLGLLIGIGRLAPQRRF-----------------VYGFCTAYLTFFRGTP 67

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +  L  F     + + P F+   + L  Y+AA+++EIVR  + +V RGQMEAA ++G
Sbjct: 68  LLVQLFLLFFGLPQFNILLPAFVCGMLGLGFYSAAYVSEIVRGAIQSVDRGQMEAARSIG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A R ++LPQA+  +IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++
Sbjct: 128 MSSGQAMRAIILPQAVVRMIPPLGNEFIALIKNSALVSLLTINDLMHEGQKIISVSYRSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E+ L    +YL L+      ++R+  ++ 
Sbjct: 188 EVYLAIALVYLVLTQATNYALHRVERRLR 216


>gi|15902771|ref|NP_358321.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|15458319|gb|AAK99531.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
          Length = 229

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 9   PKYLPYFNYGAVVTILISICVIFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++EIVR+G+ AV
Sbjct: 66  PMMVQIMIAFALMHINAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSEIVRAGINAV 123

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 124 PKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNG 183

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 184 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 229



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 11  YLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           I   +  +    P     I+      L    L     +    ++I 
Sbjct: 71  IMIAFALMHINAPTIQIGILGVDFSRLIPGILIISMNSGAYVSEIV 116


>gi|330988844|gb|EGH86947.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331008159|gb|EGH88216.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 324

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +     L   V S+   P     +    F +   L     T+       VFS +L
Sbjct: 42  RWVGSIFAALVLVAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTVFSIIL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G  L+L     +R        AL   YI  F       +++I   +   +D  +LG    
Sbjct: 102 GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHILLGVPFT 156

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 DLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 VFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTLLTSAQYYVERHFARGTAR 304



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLAQTLLLTLLSTVFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|168184265|ref|ZP_02618929.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|237794766|ref|YP_002862318.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182672656|gb|EDT84617.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|229264093|gb|ACQ55126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Ba4 str. 657]
          Length = 219

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 13/219 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R L F         KI + SF++ I L+     L  +   K    +   Y+  F   G 
Sbjct: 9   FRNLPFLLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIF--RGS 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y                        ++  I L+   AA+++EI+R+ +I++
Sbjct: 67  PLLIQLFFIYY-----------GLPSVGIAMNAEVAAVIGLALNGAAYMSEIIRAAIISI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EA  +LG T  +    ++LPQA++  +PPL + + +LLK++SL   +   +L   
Sbjct: 116 DRGQEEAGFSLGYTRLQNLCYIILPQAVKISVPPLVNGFSSLLKDTSLVSVISITELTRS 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  I ++T +  E+ L     Y  L+ +++     +  +
Sbjct: 176 GNLIYSRTARPFEVYLTLGLFYFVLTYIVSTCSKFIEKR 214



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           +L   + T  +     I A  +  +VG  R     K++  I   YVE+FR  P L+ +FF
Sbjct: 15  LLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIFRGSPLLIQLFF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +Y  + SV    +  +    G+ LN     
Sbjct: 75  IYYGLPSVGIAMNAEVAAVIGLALNGAAYM 104


>gi|320334509|ref|YP_004171220.1| polar amino acid ABC transporter inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
 gi|319755798|gb|ADV67555.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
          Length = 272

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 7/217 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               + V S V+G++L + A  L +       +A   LY+  +L+ G P LV I   Y  
Sbjct: 59  MTLYLTVASGVIGLILGVVAG-LMKTSAYWIVRAPASLYV--WLMRGTPLLVQILFVYNA 115

Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L      L  +         PE ++   AL+    A+ AE++R+G+ AVPRGQ EAA
Sbjct: 116 LPLLFPPFKALMDWAGTWPIEGGPEIIAGITALALNVGAYNAEVIRAGIQAVPRGQGEAA 175

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +A   ++LPQA+R ++PPL +  + LLK++SL  ++   +L   G  + ++T
Sbjct: 176 RSLGLSGGQAMLTIILPQALRIVVPPLVNNVVALLKDTSLVSSIALLELTLAGNRVSSET 235

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + +  +     +YL+L+ ++  F ++L  +  +  +
Sbjct: 236 FKPVPSLATIGGVYLALTTVLTFFTDQLERRTKIVSR 272



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 35/81 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G V T +L  +  +   I+G + G  + SA  +V     +YV + R  P LV I F+
Sbjct: 53  FVQGAVMTLYLTVASGVIGLILGVVAGLMKTSAYWIVRAPASLYVWLMRGTPLLVQILFV 112

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y ++  + P     +      
Sbjct: 113 YNALPLLFPPFKALMDWAGTW 133


>gi|311695810|gb|ADP98683.1| amino acid ABC transporter, permease protein [marine bacterium
           HP15]
          Length = 223

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 13/230 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F        + F    +     I     ++G  L +F   LS +  +   +    
Sbjct: 2   EFQFQFDWQAAIDSIPFLIKGIPYTLLISFGGLLIGFALGIFFGLLSIN-KKWFLRWPAT 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YI  F   G P LV +   +    D         IGG        +   A++  + A+I
Sbjct: 61  AYIEIF--RGTPILVQVLFIFYGLPDL--------IGGPI--DPLTAGIAAIALNSGAYI 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+VR G+ ++ +GQ EA ++LGL+  +    V+ PQA R +IPPL +Q +  +K++SL 
Sbjct: 109 SEVVRGGVQSIDKGQTEAGLSLGLSRTQTFWSVVWPQAFRRMIPPLGNQAIVSIKDTSLF 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +G  +LV  G   I  T  A E+  +   +YL++++ +++ +  +  +
Sbjct: 169 SVIGVGELVRQGQIYIANTFTAFEVYFVVAILYLAITLSLSIILRFVERR 218



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 34/74 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++F G++    +G   G   ++    + W    Y+E+FR  P LV + F+
Sbjct: 19  LIKGIPYTLLISFGGLLIGFALGIFFGLLSINKKWFLRWPATAYIEIFRGTPILVQVLFI 78

Query: 149 YKSVLSVLPIPDHS 162
           +  +  ++  P   
Sbjct: 79  FYGLPDLIGGPIDP 92


>gi|308172211|ref|YP_003918916.1| cystine ABC transporter permease [Bacillus amyloliquefaciens DSM 7]
 gi|307605075|emb|CBI41446.1| cystine ABC transporter (permease), membrane protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|328552021|gb|AEB22513.1| cystine ABC transporter (permease), membrane protein [Bacillus
           amyloliquefaciens TA208]
          Length = 234

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 15/245 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +                  +        +  +  +  + + SF+ G++++L  T L+R  
Sbjct: 1   MFLSNMPEPVIAAAIPWDLVQQSFWPILSGGIYYSIPLTILSFIFGMIIALI-TALARMS 59

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + K  + +  +Y+S   + G P LV + + + L           F   +     F S  I
Sbjct: 60  NMKPLRWVFSVYVSA--VRGTPLLVQLFIIFYL-----------FPTFNITLDPFPSAVI 106

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A S    A+ +EI+R+ + +VP+GQ EA   +G+T+RK    V+LPQA R  IPPL++ +
Sbjct: 107 AFSLNVGAYASEIIRASISSVPKGQWEAGYTIGMTYRKTLFRVILPQAFRVSIPPLSNTF 166

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++L+K++SLA  +  A+L      I  Q   Q + I +   FIY  +  ++++    +  
Sbjct: 167 ISLIKDTSLASQILVAELFRKAQEIGAQNLDQILVIYIEAAFIYWIICFLLSIVQLVIER 226

Query: 391 KIALK 395
           ++   
Sbjct: 227 RLDRY 231



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 32/91 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G   +  L     I   II  +    R+S  K + W+  VYV   R  P 
Sbjct: 21  QQSFWPILSGGIYYSIPLTILSFIFGMIIALITALARMSNMKPLRWVFSVYVSAVRGTPL 80

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++    +     D          LN
Sbjct: 81  LVQLFIIFYLFPTFNITLDPFPSAVIAFSLN 111


>gi|300853856|ref|YP_003778840.1| putative amino acid ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300433971|gb|ADK13738.1| predicted amino acid ABC transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 198

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V + +LG +L +F   L +       K +   Y  T++  G P L+ +   Y  
Sbjct: 1   MTIELTVITLILGTMLGVFL-ALLKLSKNIVLKLVSSFY--TWIFRGTPLLLQLFFFYY- 56

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      FIG       F +  + L     A++AEI+R G+ ++ +GQ EAA ALG
Sbjct: 57  --------GLPFIG--IELTPFTAAILGLGLNCGAYMAEIIRGGIQSINKGQFEAAKALG 106

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            ++ +  R ++LPQ  + IIPP+ ++++++LK++SL   +   +L+     I   +   I
Sbjct: 107 FSYVETMRKIILPQTWKIIIPPVGNEFISILKDTSLVSTIAMVELMRSAQQIYASSFDPI 166

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + L    +YL ++ +          ++A+ 
Sbjct: 167 SVFLTAAILYLIMTTVFTTVFGIFERRLAIY 197



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L    +I  T++G  +   +LS N ++  +   Y  +FR  P L+ +FF Y  +  +
Sbjct: 2   TIELTVITLILGTMLGVFLALLKLSKNIVLKLVSSFYTWIFRGTPLLLQLFFFYYGLPFI 61

Query: 156 LPIPDHSIVLPFGMFLN 172
                       G+ LN
Sbjct: 62  GIELTPFTAAILGLGLN 78


>gi|224418024|ref|ZP_03656030.1| amino acid ABC transporter permease [Helicobacter canadensis MIT
           98-5491]
 gi|253827356|ref|ZP_04870241.1| ABC-type transport system, permease component [Helicobacter
           canadensis MIT 98-5491]
 gi|313141563|ref|ZP_07803756.1| amino acid transport system permease protein [Helicobacter
           canadensis MIT 98-5491]
 gi|253510762|gb|EES89421.1| ABC-type transport system, permease component [Helicobacter
           canadensis MIT 98-5491]
 gi|313130594|gb|EFR48211.1| amino acid transport system permease protein [Helicobacter
           canadensis MIT 98-5491]
          Length = 225

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 13/228 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F+N     +    +  +      S ++GI L +    L +    K    L   Y+  ++
Sbjct: 11  VFINENRYWYLVEGLGFSIATTALSALIGIALGILI-ALMQLSTWKVLSKLAFAYV--YI 67

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P +V + +   +           F+G     P  +   IA    + A++AEI+R+G
Sbjct: 68  IRGTPVVVQLMIWANI----------VFVGALRDMPILLIAAIAFGINSGAYVAEIIRAG 117

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  + +GQMEAA ALG+ +  + + +++PQA++ I+PPL S+++ LLK +S+   +G  D
Sbjct: 118 IAGLDKGQMEAARALGMGYALSMKEIIIPQAIKRILPPLVSEFIALLKETSIVGFIGGVD 177

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+     I +QT +AIE +L    IYL L+ + A+ M ++  ++   +
Sbjct: 178 LLRAANIITSQTYRAIEPLLAVGIIYLILTSIFAMLMRKVEKRLKESD 225



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 26/68 (38%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   +        +    +G L+   +LS  K+++ +   YV + R  P +V +
Sbjct: 18  YWYLVEGLGFSIATTALSALIGIALGILIALMQLSTWKVLSKLAFAYVYIIRGTPVVVQL 77

Query: 146 FFLYKSVL 153
                 V 
Sbjct: 78  MIWANIVF 85


>gi|222823907|ref|YP_002575481.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family
           [Campylobacter lari RM2100]
 gi|222539129|gb|ACM64230.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter lari RM2100]
          Length = 260

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 14/211 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             T+  I V S V+G++ +L    +S     K         +   L+ G P LV I L Y
Sbjct: 64  FFTSFFISVLSLVVGVIFALILCYMS---LCKIVLFNMFARVFIELVRGTPLLVQILLIY 120

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +           F     +   ++   + L+ + +A+I EI R+G+++V + Q E+A A
Sbjct: 121 YI-----------FADNLGLDNRYVCGVLILALFASAYICEIFRAGILSVDKMQYESAKA 169

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+  +  + V+ PQA+++I+ PL+ Q  NL+K+SSL   +  ++L      I   T  
Sbjct: 170 LGLSEFEIYKSVIFPQALKNILAPLSGQLSNLIKDSSLLSVIAISELTQNAQEINAFTFS 229

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +EI +     YL L++ I++F  +L    +
Sbjct: 230 TLEIYIPLALCYLVLTLPISMFSRKLEKSFS 260


>gi|91784367|ref|YP_559573.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|296158455|ref|ZP_06841286.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|91688321|gb|ABE31521.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295891399|gb|EFG71186.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 225

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   +           +     + + SF +G+ L+ F   L R F  K   A+   Y
Sbjct: 1   MPAWLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALA-FLVALVRLFGPKWAVAIVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F   G P LV + + +                   V     +  I  S    A+ +E
Sbjct: 60  VWLF--RGSPLLVQLFVIFY-----------GLPNVGIVLDPLTAAIIGFSLNVGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P+GQ EAA ++G+T  +A R  +LPQA R  +PPL++ ++ L+K++SLA  
Sbjct: 107 VIRGVIESIPKGQWEAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I + T + + +      +YL  S +++    RL  K   
Sbjct: 167 LTVPEVFQAAQRIASVTYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGR 217



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 35/94 (37%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S    +  G V T  L          +  LV   RL   K    I R YV +FR 
Sbjct: 6   HLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVAIVRFYVWLFRG 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P LV +F ++  + +V  + D       G  LN
Sbjct: 66  SPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLN 99


>gi|86151036|ref|ZP_01069252.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153144|ref|ZP_01071349.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121612505|ref|YP_001000623.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|167005552|ref|ZP_02271310.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85842206|gb|EAQ59452.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85844029|gb|EAQ61239.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87248894|gb|EAQ71857.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 261

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L   YI   LI G P LV + L Y +  
Sbjct: 68  LIISFFSLLLSIILGGVFCAFS-LSSIVFLRFLSTFYIE--LIRGTPLLVQVLLMYYIIA 124

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 125 NNLGLDN-----------RYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLK 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 174 EMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 233

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I++F   L  K
Sbjct: 234 YVILAITYLILTLPISIFSRYLERK 258



 Score = 54.6 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 44/87 (50%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 40  SFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFL 99

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 100 STFYIELIRGTPLLVQVLLMYYIIANN 126


>gi|319762081|ref|YP_004126018.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317116642|gb|ADU99130.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 221

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 14/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L           ++ V SF+L   + L    L +    +         I
Sbjct: 1   MQAFLQHAREFLPILLQGAVVTVQVTVLSFLLSSAIGLVL-ALGKLSPVRAVSVCASTVI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I GLP +V +   Y           F           F +  I L    +A+ AE 
Sbjct: 60  N--VIRGLPIIVQLFYIY-----------FVLPDIGIQLSAFQAGVIGLGIAYSAYQAEN 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ AV  GQ EAA+A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +
Sbjct: 107 FRAGIEAVDPGQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             A++   G  I + T Q + +  +   +YL++S+ +   + RL  +     K
Sbjct: 167 TVAEMTRAGQLIASSTFQNMTVYTLVALLYLAMSLPLVWSLRRLERRFGAGRK 219


>gi|289626489|ref|ZP_06459443.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|330868339|gb|EGH03048.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 0893_23]
          Length = 324

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +     L   V S+   P     +    F +   L     T+       VFS +L
Sbjct: 42  RWVGSIFAALVLVAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTVFSIIL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G  L+L     +R        AL   YI  F       +++I   +   +D  VLG    
Sbjct: 102 GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 DLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 VFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL +++++      +    A    +
Sbjct: 277 TVWYLIITMLLTSAQYYVERHFARGTAR 304



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLAQTLLLTLLSTVFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|228937879|ref|ZP_04100507.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228970760|ref|ZP_04131400.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228788885|gb|EEM36824.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821785|gb|EEM67785.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326938357|gb|AEA14253.1| glutamine transport system permease protein glnP [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 218

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++ +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWVGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWVGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|153809738|ref|ZP_01962406.1| hypothetical protein RUMOBE_00119 [Ruminococcus obeum ATCC 29174]
 gi|149833916|gb|EDM88996.1| hypothetical protein RUMOBE_00119 [Ruminococcus obeum ATCC 29174]
          Length = 264

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 98/245 (40%), Gaps = 19/245 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL------- 207
           +LP      ++          L    ++M       +F  ++G ++ +  T         
Sbjct: 1   MLPESFGGRIIYLLQQYGPSFLKGAGVSMWLALVGTLFGCIIGFLVGIVQTIPVDKNDST 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    K  K +   Y+  F   G P +      Y   F    L   N          + 
Sbjct: 61  AKKVIIKVVKFIMACYVEFF--RGTPMMAQAMFIY---FGSAYLFNIN-------MSMWF 108

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +    +S  T A++AE VR G++++  GQ E A A+G+TH +    V+LPQA+R+I+P +
Sbjct: 109 AAIFIVSINTGAYMAETVRGGILSIDPGQTEGAKAIGMTHVQTMINVILPQALRNIMPQI 168

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  +  +K++ +   +G  +L      +        E   I M IY  ++   +  +  
Sbjct: 169 GNNLIINIKDTCVLSIIGTVELFYTTKGVAGALYTYFESFTIAMVIYFIMTFTCSRILRV 228

Query: 388 LNAKI 392
           +  K+
Sbjct: 229 IEHKM 233



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 12/93 (12%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA------------NKLVAWICR 130
             Y  + L G   + WLA  G +   IIG LVG  +                K+V +I  
Sbjct: 15  QQYGPSFLKGAGVSMWLALVGTLFGCIIGFLVGIVQTIPVDKNDSTAKKVIIKVVKFIMA 74

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            YVE FR  P +    F+Y     +  I     
Sbjct: 75  CYVEFFRGTPMMAQAMFIYFGSAYLFNINMSMW 107


>gi|29840303|ref|NP_829409.1| amino acid ABC transporter, permease protein [Chlamydophila caviae
           GPIC]
 gi|29834652|gb|AAP05287.1| amino acid ABC transporter, permease protein [Chlamydophila caviae
           GPIC]
          Length = 217

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 107/216 (49%), Gaps = 15/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+  +    +F  +LG+++       SR+F  +  + L  LY++  +I G P  
Sbjct: 12  LRGCGYTLCVSGISILFGSLLGLIIGTMT---SRYFPCRITRWLGNLYVT--VIRGTPLF 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I + Y   F  P + + +           M+  IALS  ++A++AE +R G+ A+  G
Sbjct: 67  IQILIFY---FGLPSIIRLD-------PTPLMAGLIALSINSSAYLAESIRGGINALSVG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LG    +    ++ PQ  ++I+P LT++++ L+K SS+ + VG  +L  V   
Sbjct: 117 QWESAKVLGYKKSQIFAYIIYPQVFKNILPSLTNEFVALIKESSILMVVGVPELTKVSKD 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I+++    +E+  I   +YL ++ + +     L  +
Sbjct: 177 IVSRELNPMEMYSICAALYLLMTSLFSYVARLLERR 212



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAG--RLSANKLVAWICRVYVEVFRNIPPLV 143
           A  +L G   T  ++   ++  +++G ++G    R    ++  W+  +YV V R  P  +
Sbjct: 8   AKVLLRGCGYTLCVSGISILFGSLLGLIIGTMTSRYFPCRITRWLGNLYVTVIRGTPLFI 67

Query: 144 VIFFLYKSVLSVLP 157
            I   Y  + S++ 
Sbjct: 68  QILIFYFGLPSIIR 81


>gi|296158407|ref|ZP_06841238.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891351|gb|EFG71138.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 265

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 12/249 (4%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           +   P     +PF +             +         + +LG V+ +    LS   H  
Sbjct: 1   MPHAPHLVFDMPFFLHFVFDPRPALLQGLVVTVLGAAIAQLLGTVIGVVLG-LSGMHHAL 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI------GGSTVSPEFMS 268
             + L   YI  F   G P LV + L Y   F  P L  F+        G   +S   ++
Sbjct: 60  PLRVLNQGYIWFF--RGTPVLVQLVLIY---FGLPYLVGFDLFPAVMSLGPLHLSGALVA 114

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA   + AA+++EI R+ + ++  GQMEAA+A+G+T   A R ++LPQA+  I+P L 
Sbjct: 115 GVIAFGLHEAAYMSEITRASVGSINPGQMEAALAVGMTPAMAMRRIVLPQAVPLIVPALG 174

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q+ N+LK ++L   +G +++  V   +   T    E+ L     YL L+ +     + L
Sbjct: 175 NQFNNMLKTTALLSVIGVSEMFRVAEQMQAATFMTFEVYLGVSVYYLMLTGVWTFIQHGL 234

Query: 389 NAKIALKEK 397
            A ++   +
Sbjct: 235 EAWLSRGGR 243



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T   A    +  T+IG ++G   +     +  + + Y+  FR  P LV +  
Sbjct: 24  ALLQGLVVTVLGAAIAQLLGTVIGVVLGLSGMHHALPLRVLNQGYIWFFRGTPVLVQLVL 83

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFL 171
           +Y  +  ++       V+  G   
Sbjct: 84  IYFGLPYLVGFDLFPAVMSLGPLH 107


>gi|168183031|ref|ZP_02617695.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|237794466|ref|YP_002862018.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182673740|gb|EDT85701.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|229261625|gb|ACQ52658.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Ba4 str. 657]
          Length = 222

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 11/227 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    + L            I + S ++ ++  +    + R +  K   ++  +YIS 
Sbjct: 4   FDVKYLVQSLIVLLKYAHITLSIAILSMIIAVLFGVIL-AVIRMYKVKFLHSISEIYISF 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P L+ + L Y   +  P +     I      P +M++ IALS   +A++AEI+R
Sbjct: 63  F--RGTPILIQLFLFY---YGLPQI-----IPSFKEIPAYMAVVIALSMNGSAYMAEIIR 112

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             ++++ +GQMEA+++LG+T  +A + ++LPQA R  IP L + +++LLK+SSLA  VG 
Sbjct: 113 GAIMSIDKGQMEASLSLGMTEFQAMKRIILPQAARVAIPSLGNSFIDLLKSSSLAFTVGV 172

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+++S        + +  E  L    IY  +  +       L  +I 
Sbjct: 173 AEILSKAQMNAASSYRFFESYLAVALIYWVMVELFNFMQKLLERRIG 219



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 37/96 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A   MI A + G ++   R+   K +  I  +Y+  FR  P L+ +F  Y  +  +
Sbjct: 23  TLSIAILSMIIAVLFGVILAVIRMYKVKFLHSISEIYISFFRGTPILIQLFLFYYGLPQI 82

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +P           +   +   S     +   A + +
Sbjct: 83  IPSFKEIPAYMAVVIALSMNGSAYMAEIIRGAIMSI 118


>gi|47569425|ref|ZP_00240107.1| cystine transport system permease protein [Bacillus cereus G9241]
 gi|47553933|gb|EAL12302.1| cystine transport system permease protein [Bacillus cereus G9241]
          Length = 285

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 64/188 (34%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 96  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 141

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 142 GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLG 201

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++    +N L
Sbjct: 202 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLETYIIVGLYYLVLVLLFTYLVNLL 261

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 262 EKRLQRKE 269


>gi|170697555|ref|ZP_02888645.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170137578|gb|EDT05816.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 603

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 105/253 (41%), Gaps = 1/253 (0%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
            +   + SVL  P     +    F +   L+    T+   A   V  F L I L+L    
Sbjct: 48  LIASVLYSVLGNPRWGWNVFAHWFFSEAVLAGLGQTLLLTALGAVLGFALAIPLALARLS 107

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPE 265
            S      +   + L      ++  L    L  L   +    P        G +T +   
Sbjct: 108 RSPLLSSCSWAYIWLFRSIPTIVLLLLLNNLGYLYDTVRLGIPFTDIVFLRGPTTDLITP 167

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           FM+  + L+   AAF AE +R G+++V  GQ EAA ALGL   + T  ++LPQAMR+I+P
Sbjct: 168 FMAAILGLTLTQAAFAAEAIRGGILSVEHGQREAAAALGLPRARQTWRIVLPQAMRAILP 227

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  + L K +++   +   DL      I ++  + I ++++    YL +  +++   
Sbjct: 228 AAFNDVIGLAKGTAVVYILAMPDLFYTVQIIYHRNLEVIPMLMVATVWYLVILTVLSAIQ 287

Query: 386 NRLNAKIALKEKK 398
             +    A    +
Sbjct: 288 VHIERHYARGATR 300



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           A+L G   T  L   G +    +   +   RLS + L++     Y+ +FR+IP +V
Sbjct: 75  AVLAGLGQTLLLTALGAVLGFALAIPLALARLSRSPLLSSCSWAYIWLFRSIPTIV 130


>gi|150389058|ref|YP_001319107.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
 gi|149948920|gb|ABR47448.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
          Length = 227

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VF F++G+ ++       R  +       PL  I    I G+P L+ I + Y   F
Sbjct: 30  VVSLVFGFMIGLTVAFIRIYKVRGLY-------PLTSIYLSAIRGVPLLIQIFIFY---F 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +    F         FMS  IA S  + A+++E +R+ ++++ +GQ EAA+++G+T
Sbjct: 80  GVPQI----FPQTIHFLTPFMSACIAFSINSGAYMSETIRAAILSIDKGQKEAALSVGMT 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             KA + ++LPQA    IP L +  +NLLK +SLA  +G ADL+     +     + +E 
Sbjct: 136 EFKAMKNIVLPQAAVVAIPSLGNTIINLLKETSLAFTIGIADLLGRAKMLSASNYRYLET 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IY  ++I+I   +N+L  + +
Sbjct: 196 FVATGLIYWGITILITYVLNKLEKRFS 222



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 36/98 (36%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            + T  +    ++   +IG  V   R+   + +  +  +Y+   R +P L+ IF  Y  V
Sbjct: 22  ILVTVNMLVVSLVFGFMIGLTVAFIRIYKVRGLYPLTSIYLSAIRGVPLLIQIFIFYFGV 81

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             + P   H +       +     S   ++    A I 
Sbjct: 82  PQIFPQTIHFLTPFMSACIAFSINSGAYMSETIRAAIL 119


>gi|307708519|ref|ZP_07644984.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           NCTC 12261]
 gi|307615435|gb|EFN94643.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           NCTC 12261]
          Length = 227

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 109/212 (51%), Gaps = 9/212 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +  F  +LG+VL+       +    K    L  LY+  F   G P +V I + + L  
Sbjct: 25  ICVVFFGTILGVVLAF-----GQRSKFKPLVWLANLYVWIF--RGTPMMVQIMIAFALMH 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                 Q   +G        +   + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+ 
Sbjct: 78  INAPTIQVGILG--VDLSRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIR 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  
Sbjct: 136 PKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTP 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L   F YL ++ ++ + +     ++   +KK
Sbjct: 196 LLFAAFYYLIMTSILTVALKAFEKRMGQGDKK 227



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTVLISICVVFFGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|297562617|ref|YP_003681591.1| polar amino acid ABC transporter inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296847065|gb|ADH69085.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 310

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 23/274 (8%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   V++      V  +      +    F    +   +    +T+       V   VL
Sbjct: 24  RWVAAGVILVLAAMFVHMLFTNDAFNWPFMFDHMFSEPVVRGVWITLSATVLSMVIGVVL 83

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA---------LKYQLHFD 247
           GIVL++      R        ++  LY   F       L ++          +++ L FD
Sbjct: 84  GIVLAVM-----RLSGNPVLVSVSWLYTWFFRGVPRLVLAVLFGNIAILYQTIEFGLPFD 138

Query: 248 KPVLGQ--------FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
              +          F  I   TV   + +  +ALS    A++AEI+R+GL +V +GQ EA
Sbjct: 139 NYWMPWLGLEGDARFFEIDTRTVLSGYTAGLLALSLSEGAYMAEIIRAGLQSVNKGQTEA 198

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIIN 358
           A ALG+   K  R + LPQAMR ++PP  ++ + +LK+++L   V    +L      I +
Sbjct: 199 AQALGMGKGKVLRRITLPQAMRVVVPPTGNETIAMLKDTALLAYVPVTIELFYQLQAIGS 258

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +T Q   +++     YL+++ ++ +    L  + 
Sbjct: 259 RTYQIFPMLVAACLWYLAITSVLMVGQYFLERRF 292



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 46/123 (37%), Gaps = 2/123 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+  D  ++  ++ G   T       M+   ++G ++   RLS N ++  +  +Y   FR
Sbjct: 51  PFMFDHMFSEPVVRGVWITLSATVLSMVIGVVLGIVLAVMRLSGNPVLVSVSWLYTWFFR 110

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            +P LV+        +          +     ++   GL       + + +  +  +  G
Sbjct: 111 GVPRLVLAVLFGNIAILY--QTIEFGLPFDNYWMPWLGLEGDARFFEIDTRTVLSGYTAG 168

Query: 198 IVL 200
           ++ 
Sbjct: 169 LLA 171


>gi|226324098|ref|ZP_03799616.1| hypothetical protein COPCOM_01876 [Coprococcus comes ATCC 27758]
 gi|225207647|gb|EEG90001.1| hypothetical protein COPCOM_01876 [Coprococcus comes ATCC 27758]
          Length = 247

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 48/181 (26%), Positives = 94/181 (51%), Gaps = 8/181 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-----PEFMSLYIALSC 275
           L+ I   +I G P LV +   Y  +F  P+L ++      T          +  ++AL+ 
Sbjct: 56  LVSIYISVIRGTPILVQL---YVTYFGIPMLLKYINFKCGTNYNVNGVAPIVYAFVALAL 112

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +AF AEI+R+ L +V +GQ+EAA ALG+ + +A   ++LP+A+   +P L + ++ L+
Sbjct: 113 NESAFNAEIIRASLESVDKGQVEAASALGMNYFQALIRIILPEAIVVALPSLGNAFIGLI 172

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K +SLA      ++ + G  +  +  +  E+ +    IY  ++ ++   ++ L  K+ + 
Sbjct: 173 KGTSLAFVCSVVEMTAEGKILAGRNYRYFEVYISLAIIYWVITFVLERVISYLEKKLRVP 232

Query: 396 E 396
           E
Sbjct: 233 E 233


>gi|227529474|ref|ZP_03959523.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus vaginalis ATCC
           49540]
 gi|227350559|gb|EEJ40850.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus vaginalis ATCC
           49540]
          Length = 231

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 102/205 (49%), Gaps = 2/205 (0%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF  G++++L  T L R  H++ G  + L +   F ++   +  L+   + + F  
Sbjct: 23  LALISFFFGLIIALV-TALIRLSHQR-GPFMILKWFVQFYVWLFRSTPLLVQLFIVFFGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L     +        F +  I  S  T ++ +E +R+ + +V  GQ EA  A+G+T  
Sbjct: 81  PYLRIRGILPHGIKLEPFTAGIITFSLNTGSYASETIRAAISSVDHGQWEAGAAIGMTRL 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    +++PQA+R  +PPL++ +++L+K++SLA ++   ++  V   I     Q + +  
Sbjct: 141 QILWRIIIPQALRVALPPLSNSFISLVKDTSLAASITIMEMFEVSQQIAAANYQPLLMYT 200

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIA 393
           +   IY   + ++++  + L  +  
Sbjct: 201 LVALIYAVFTTVLSVLQHYLEKRFG 225



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----LVAWICRVYVEVFRNIPPLVV 144
           +  GF  T  LA        II  +    RLS  +    ++ W  + YV +FR+ P LV 
Sbjct: 13  LAAGFKYTIPLALISFFFGLIIALVTALIRLSHQRGPFMILKWFVQFYVWLFRSTPLLVQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           +F ++  +  +         +    F 
Sbjct: 73  LFIVFFGLPYLRIRGILPHGIKLEPFT 99


>gi|260425536|ref|ZP_05779516.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Citreicella sp. SE45]
 gi|260423476|gb|EEX16726.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Citreicella sp. SE45]
          Length = 263

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 12/256 (4%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
            F  +   +  L    +  VL   +           + +     +  F+    + + +  
Sbjct: 8   DFPWWLVAVLALGALGYGAVLADELQAQILATLAKGVQVTVFVTLVSFALASALGMGVAL 67

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             LS H   +  + L   Y    ++ G+P LVL+     +     V  +   +G   V P
Sbjct: 68  MSLSDH---RLPRQLARFYTE--IVRGIPMLVLLLYVAFVLAPALVELRNWALGWLGVEP 122

Query: 265 E-------FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                        +AL+   +AFIAE+ R+GL++V  GQ+EAA ALGL+  +  RL++LP
Sbjct: 123 ARTRDFPLVWRAILALTIGYSAFIAEVFRAGLLSVDEGQVEAAQALGLSRYQRFRLIVLP 182

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R+I+PPL + ++ ++K+SSL   +G  D+  +G        +  E   +   IYL++
Sbjct: 183 QAIRTILPPLGNDFVAMVKDSSLVSVLGVLDVTQLGKVTAAGNFRYFETYNVVALIYLTM 242

Query: 378 SIMIALFMNRLNAKIA 393
           +I ++L + RL A++ 
Sbjct: 243 TITLSLALRRLEARLR 258



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 41/118 (34%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                +  G   T ++       A+ +G  V    LS ++L   + R Y E+ R IP LV
Sbjct: 35  QILATLAKGVQVTVFVTLVSFALASALGMGVALMSLSDHRLPRQLARFYTEIVRGIPMLV 94

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ ++   +   L    +  +   G+                   I   +F+  +  +
Sbjct: 95  LLLYVAFVLAPALVELRNWALGWLGVEPARTRDFPLVWRAILALTIGYSAFIAEVFRA 152


>gi|190404349|ref|YP_001960980.1| rcorf5 [Agrobacterium rhizogenes]
 gi|158322145|gb|ABW33562.1| rcorf5 [Agrobacterium rhizogenes]
          Length = 255

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 12/242 (4%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +  L + + L           +     + + S  +GI+  LF        +    +    
Sbjct: 2   NFDLHYFLELVFSPPPQLIYAVWLTVSVTLTSMAVGIIAGLFLALFGLSLYG-ALRGFNW 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF------MSLYIALSC 275
           LY+  F   G P LV + L Y   F  P L   +    +  +P F      ++   A S 
Sbjct: 61  LYVWFF--RGTPILVQLFLIY---FGLPYLIGVDIFPSTITTPAFSISGAIVAGIFAFSL 115

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           + AA+++EI R+G+ +V +GQ EAA ALG+    A R ++LPQA+R I+P L +Q   + 
Sbjct: 116 HEAAYMSEITRAGIRSVEKGQSEAAQALGMLPSLAMRRIILPQALRIILPSLGNQCNMMF 175

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K ++    +   +LV V  ++ +Q  +  E+       YL L+ +  +    +  +++  
Sbjct: 176 KTTAFLSVIAVPELVHVADSLRSQNFKTFEVYAAISVYYLVLTGVWTVLQQWIENRLSWS 235

Query: 396 EK 397
            +
Sbjct: 236 PR 237


>gi|239833357|ref|ZP_04681685.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821420|gb|EEQ92989.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 215

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 14/222 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             R L F         +I   + +LG+V++       R       + L   Y+S F   G
Sbjct: 6   MQRVLPFFLEAAWVTVQISALALILGLVVAAILVA-GRLSRSPILRGLAAAYVSVF--RG 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV + +   L+F  P +       G  + P F +  I L     A+++E +R  + +
Sbjct: 63  TPCLVQLFI---LYFGGPQV-------GINLEP-FAAGVIGLGLNIGAYMSESIRGAIQS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ EAA ++G    +  RLV+LPQA R +I PL    + LLK S+L   +   +L  
Sbjct: 112 VDRGQTEAARSVGFGRGQTMRLVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I  T +  EI  +   +Y+ +  ++A  ++ L+ + A
Sbjct: 172 TAQRFIGSTYKPFEIFGVAAILYMIIIYVVARGVDFLDKRFA 213



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 9/108 (8%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q ++P+          L     T  ++   +I   ++  ++ AGRLS + ++  + 
Sbjct: 3   FALMQRVLPF---------FLEAAWVTVQISALALILGLVVAAILVAGRLSRSPILRGLA 53

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
             YV VFR  P LV +F LY     V    +       G+ LN     
Sbjct: 54  AAYVSVFRGTPCLVQLFILYFGGPQVGINLEPFAAGVIGLGLNIGAYM 101


>gi|224369395|ref|YP_002603559.1| GlnP6 [Desulfobacterium autotrophicum HRM2]
 gi|223692112|gb|ACN15395.1| GlnP6 [Desulfobacterium autotrophicum HRM2]
          Length = 223

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 12/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +       + L ++YI +  I G P LV       L++  P+             P   +
Sbjct: 46  KLARHAVPRILAIVYIES--IRGTPMLVQAMF---LYYGVPMAMGLRI-------PPITA 93

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I ++  + A+IAEIVR  + ++  GQ EA  ++GLT  +    ++ PQA + +IPPL 
Sbjct: 94  GIIIIAVNSGAYIAEIVRGSVQSIDPGQTEAGRSIGLTRSQTMAYIIWPQAFKRMIPPLG 153

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK++SL + +G  +L+  G  I+  + +A E+ L    +YL++++ IA  +  L
Sbjct: 154 NQFIISLKDTSLLMVIGVGELLRTGQEIVAVSFKAFEVYLSVAVVYLAMTLSIARGLRIL 213

Query: 389 NAKIALKEKK 398
              + +K K+
Sbjct: 214 EHHLEMKTKR 223


>gi|167570892|ref|ZP_02363766.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia oklahomensis C6786]
          Length = 219

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAVLTLKFAVASMVLGLIVGLVV-AIVRIGNNRILSAVAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G ++ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDI----------GISLDPT-SAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+    AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETHCAL 215



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A + M+   I+G +V   R+  N++++ + + YV + R  P LV +F 
Sbjct: 13  VLAKGAVLTLKFAVASMVLGLIVGLVVAIVRIGNNRILSAVAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDIGISLDPTSAGIFTLTLN 97


>gi|152995146|ref|YP_001339981.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150836070|gb|ABR70046.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 236

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             + ++ + S VLG + +L    L+R       +A+P  YI  F   G P LV I L Y 
Sbjct: 18  WVSLQLVLISIVLGGIFAL-PIALARISPVAWIRAIPFAYIFFF--RGTPLLVQIFLVYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                    QF+ +  S + P     +    IA +  T+A+ AEI R  + A+P+G++EA
Sbjct: 75  GA------SQFDAVRESFLWPILREPYWCAIIAFTLNTSAYTAEIFRGAIQAIPQGEVEA 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
              +G+T  +  R VLLP+A   ++P   ++ + +LK S+LA  +   DL  +  TII +
Sbjct: 129 CKVIGMTKFQMYRRVLLPRAFGIVLPAYGNEIILMLKGSALASTITILDLTGMARTIIAR 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T   +EI L    IYL +SI+I     ++  +
Sbjct: 189 TYTPMEIFLAAGAIYLVISIVIIAIFRQIELR 220



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L    ++   I    +   R+S    +  I   Y+  FR  P LV 
Sbjct: 9   YFPRLLEGAWVSLQLVLISIVLGGIFALPIALARISPVAWIRAIPFAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           IF +Y        + +  +            ++F   T    A+IF
Sbjct: 69  IFLVYYGASQFDAVRESFLWPILREPYWCAIIAFTLNTSAYTAEIF 114


>gi|73542697|ref|YP_297217.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72120110|gb|AAZ62373.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 217

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 12/210 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F  +  L + L L    L+R        +L   YI  +L+ G P ++ +   Y    
Sbjct: 19  LTLFFITLALSVPLGLAL-ALARISKWPLLSSLVNGYI--WLMRGTPLMLQMLFIYFALP 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ EA+ ALG+T
Sbjct: 76  FVPVI--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEASKALGMT 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R V+LPQ +  ++PP++++ + L+K++SL   +   D++     I+ +       
Sbjct: 128 YFQTMRRVVLPQMVSRVLPPVSNETITLIKDTSLIYVLALNDILRTARGIVQRDF-TTTP 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            L+    YL +++++  F   L  + A  +
Sbjct: 187 FLVAALFYLLMTLILTWFFQNLEKRYAKHD 216



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L F  +  +  +G  +   R+S   L++ +   Y+ + R  P ++ + F+
Sbjct: 11  LAQGAKITLTLFFITLALSVPLGLALALARISKWPLLSSLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|228987345|ref|ZP_04147465.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228772317|gb|EEM20763.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 222

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 16  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DLYTSIFRGT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 69  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 119 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 179 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 222



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +     +Y  +F
Sbjct: 6   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADLYTSIF 65

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 66  RGTPLVLQLMIIYFGVPQI 84


>gi|310829835|ref|YP_003962192.1| amino acid ABC transporter [Eubacterium limosum KIST612]
 gi|308741569|gb|ADO39229.1| amino acid ABC transporter [Eubacterium limosum KIST612]
          Length = 218

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 14/219 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    +T+   A   + S  LG + +L +            +    +YI  +++ G P
Sbjct: 12  PMLQGCLVTLAVFAVTIISSLPLGFLFTLMS-----RSRIMVLRGFAEVYI--YILRGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ +   Y   F  P+L     +G   V   F +  IA     AA+ AEI R GL+A+ 
Sbjct: 65  LLLQLMFVY---FGLPLLPG---VGKFLVFDRFSAACIAFGLNYAAYFAEIFRGGLLAID 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA+  LGLT  +    V++PQ +R  +P ++++ + LLK+++L   +G A+++   
Sbjct: 119 KGQYEASKVLGLTKFETMTRVVIPQMIRVCLPSISNETITLLKDTALVTTIGVAEIIHYA 178

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            T +N+        ++   IYL ++ ++     +L  K 
Sbjct: 179 KTAVNRDANPF-AFVVAAAIYLVINFVLTFIFKKLEKKY 216



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 38/103 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    +I +  +G L      S   ++     VY+ + R  P L+ + F+
Sbjct: 13  MLQGCLVTLAVFAVTIISSLPLGFLFTLMSRSRIMVLRGFAEVYIYILRGTPLLLQLMFV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +  +  +    +   F       GL++     +      +
Sbjct: 73  YFGLPLLPGVGKFLVFDRFSAACIAFGLNYAAYFAEIFRGGLL 115


>gi|225868950|ref|YP_002744898.1| amino acid ABC transporter permease protein [Streptococcus equi
           subsp. zooepidemicus]
 gi|225702226|emb|CAW99967.1| putative amino acid ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 227

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +TM  +A +  F  ++G++++L      +  H K    L  L
Sbjct: 1   MDFTFLPKYWAYFNYGVLVTMMISACVVFFGTIIGLLVTLI-----KRSHIKPLSWLVSL 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  LHF+   +  F  +         +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWLHFNDLPIVGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA+R+I+P L ++ + ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPKHAMRYVVLPQALRTILPALGNELITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G  +L +   +++  T   I  +L   F YL ++ +++  +  L  K+A   K
Sbjct: 172 QTIGVMELWNGAQSVVAATYLPITPLLFAAFYYLMVTTLLSYLLGALERKLAQGGK 227



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T    Y      G + T  ++   +   TIIG LV   + S  K ++W+  +YV +F
Sbjct: 1   MDFTFLPKYWAYFNYGVLVTMMISACVVFFGTIIGLLVTLIKRSHIKPLSWLVSLYVWIF 60

Query: 137 RNIPPLVVIFFLYKSV 152
           R  P +V I   +  +
Sbjct: 61  RGTPMVVQIMIAFAWL 76


>gi|118467773|ref|YP_890806.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine [Mycobacterium smegmatis str. MC2
           155]
 gi|118169060|gb|ABK69956.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Mycobacterium smegmatis str. MC2
           155]
          Length = 297

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 9/202 (4%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L R       +     YI  F   GLP L+ I + Y L    PV+     +GG  +
Sbjct: 77  VGIALLRRSANPVARWFAAAYIWLF--RGLPVLLQILIWYNLALVIPVISIPLPMGGYLL 134

Query: 263 S-------PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                     F +  + L+   +A++AEIVR+GL +V  GQ+EAA ++G+T  +  R ++
Sbjct: 135 QEPTNALVSAFTAALLGLALNESAYMAEIVRAGLNSVDSGQVEAAKSIGMTPAQTLRRIV 194

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR IIPP  + ++++LK +S+A  +G  +L+     I +     +E +      Y+
Sbjct: 195 LPQAMRVIIPPTGNDFIDMLKGTSIASVIGVTELLHAANNISSNNLLVMETLFAAAIWYM 254

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            +  +     + L       E+
Sbjct: 255 VVVTLAGFGQHYLEQWFGGAER 276



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 45/116 (38%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++VG VNT  LA      A +IG  +   R SAN +  W    Y+ +FR +P L+ I
Sbjct: 51  YRVMVVGLVNTVLLALVAQAAAIVIGVGIALLRRSANPVARWFAAAYIWLFRGLPVLLQI 110

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
              Y   L +  I     +  + +      L            +   +++  IV +
Sbjct: 111 LIWYNLALVIPVISIPLPMGGYLLQEPTNALVSAFTAALLGLALNESAYMAEIVRA 166


>gi|194468075|ref|ZP_03074061.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194452928|gb|EDX41826.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 233

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/202 (24%), Positives = 105/202 (51%), Gaps = 2/202 (0%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF  G++++L  T L R   ++ G  + L +I++F ++   +  L+   + + F  
Sbjct: 23  LAIISFFFGLIIALV-TALIRLSRQR-GAFMILKWIASFYVWLFRSTPLLVQLFIVFFGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L     +        F +  I  S  T A+ +E +R+ + +VP GQ EA  A+G+T  
Sbjct: 81  PYLRIKGVLPHGIKLEPFTAGIITFSLNTGAYASETIRAAIGSVPTGQWEAGAAIGMTRL 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    ++LPQA+R  +PPL++ +++L+K++SLA ++   ++ +V   I  +  Q + +  
Sbjct: 141 QILWRIILPQALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYT 200

Query: 369 IWMFIYLSLSIMIALFMNRLNA 390
           +   +Y   + +++ F   L  
Sbjct: 201 LVAMVYAVFTTILSYFQGYLER 222



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK----LVAWICRVYVEVFRNIPPLVV 144
           +  GF  T  LA        II  +    RLS  +    ++ WI   YV +FR+ P LV 
Sbjct: 13  LAAGFKYTIPLAIISFFFGLIIALVTALIRLSRQRGAFMILKWIASFYVWLFRSTPLLVQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           +F ++  +  +         +    F 
Sbjct: 73  LFIVFFGLPYLRIKGVLPHGIKLEPFT 99


>gi|16273641|ref|NP_439236.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae Rd KW20]
 gi|260580164|ref|ZP_05847994.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae RdAW]
 gi|1074143|pir||H64181 ABC-type transport system probable membrane spanning protein -
           Haemophilus influenzae (strain Rd KW20)
 gi|260093448|gb|EEW77381.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae RdAW]
          Length = 238

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP                   +    T+      F    ++ +++++  T
Sbjct: 1   MILLNNWLASLPFMSAERAEYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             S +   K  +AL  +YIS  +I G P LV I + +   +  P +       G T+ P 
Sbjct: 61  LPSPNLPLKLLQALCRVYIS--IIRGTPMLVQIFIIF---YGLPEV-------GITLEP- 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+A    ++PQA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQAFIRTIMPQALRISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +++ +K++SLA  V   +L  V   I     + I I      IY     +++   
Sbjct: 168 SLSNTFISTVKDTSLASLVLVTELFRVAQNITAANYEFILIYSEAALIYWIFCFVLSFLQ 227

Query: 386 NRLNAKIAL 394
           +RL  +++ 
Sbjct: 228 DRLEIRLSR 236



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFR 137
           SS+   +    + T  LA        +I  +V   R   +      L+  +CRVY+ + R
Sbjct: 24  SSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYISIIR 83

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             P LV IF ++  +  V    +          +N    +  T+     A 
Sbjct: 84  GTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAI 134


>gi|167567704|ref|ZP_02360620.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia oklahomensis EO147]
          Length = 489

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 11/251 (4%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SVL  P     +    FL+   LS    T+   A   +F F LG+ L+L     +R    
Sbjct: 71  SVLGNPQWGWPVFAEWFLSAPVLSGLARTLLLTALGALFGFALGVPLAL-----ARVSRS 125

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------GQFNFIGGSTVSPEFM 267
               A    +I  F    L  L+LI       +D   L        F  +  + +   F 
Sbjct: 126 PLVAACAWAFIWLFRSIPLVVLLLILNNLGYLYDHVWLGVPFTGITFADVATTDLISPFC 185

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+   AAF AE +R G+++V  GQ+EAA ALGL   +    ++LPQAMR+ +P  
Sbjct: 186 AAVLGLTLNHAAFAAEGIRGGILSVDPGQLEAAAALGLPRARQATRIVLPQAMRAFLPVA 245

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  ++L K +S+   +   +L      I  +  + I ++++    YL +  ++++   +
Sbjct: 246 FNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSIVQAQ 305

Query: 388 LNAKIALKEKK 398
           +  + A    +
Sbjct: 306 VERRYARGAVR 316


>gi|292558363|gb|ADE31364.1| Amino acid ABC transporter,3-TM region containing permease protein
           [Streptococcus suis GZ1]
          Length = 250

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 110/225 (48%), Gaps = 23/225 (10%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYIS 225
             + LS   +T+      F  + V+GI+  +FA    +             + +PL+ ++
Sbjct: 40  YGQLLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGIPLMIVA 99

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F+ +G+P L+      Q   +                 +F++  IALS  + A+IAEIV
Sbjct: 100 AFIFWGIPNLIESMTGQQSPIN-----------------DFVAGTIALSLNSGAYIAEIV 142

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  LK++++  A+G
Sbjct: 143 RGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVITLKDTTIISAIG 202

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +L   G  II +  Q+  +  I   IYL +  ++     +L  
Sbjct: 203 LVELFQAGKIIIARNYQSFRMYAILAIIYLVVITLLTRLARKLEK 247



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA      A +IG + G   +S  K +     V+V+V R IP ++V  F+
Sbjct: 43  LLSGLGITIGLALLSFAIAIVIGIIFGMFAVSPVKALRVTSSVFVDVVRGIPLMIVAAFI 102

Query: 149 YKSVLSVLPIPDHSIVL 165
           +  + +++         
Sbjct: 103 FWGIPNLIESMTGQQSP 119


>gi|260914457|ref|ZP_05920926.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pasteurella dagmatis ATCC 43325]
 gi|260631558|gb|EEX49740.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Pasteurella dagmatis ATCC 43325]
          Length = 238

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 110/249 (44%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + LS LP  +                +    T+      F    ++ + +++  T
Sbjct: 1   MILLNNFLSNLPFMNEERADLLISSFWPMLEATLISTIPLALISFFAGLLIAVGVAVIRT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             S+    +    L  +Y+S  +I G P LV I + +                       
Sbjct: 61  MPSQSVFHRILVGLARIYVS--IIRGTPMLVQIFIIFY-----------GLPEIGITLDP 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ +E VR+ ++++P+GQ EA+ A+G+ +R+A    ++PQAMR  +P
Sbjct: 108 FPTAIIAFSLNIGAYASETVRAAILSIPKGQWEASYAIGMGYRQAFIRTIIPQAMRVSVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL++ +++ +K++SLA  V   +L  +   +   + + I +      IY  +  ++++  
Sbjct: 168 PLSNTFISTVKDTSLASLVLVTELFRIAQNVAASSYEFILVYSQAALIYWIICFVLSIVQ 227

Query: 386 NRLNAKIAL 394
            R+  +++ 
Sbjct: 228 QRVEMRLSR 236


>gi|253681835|ref|ZP_04862632.1| amino acid ABC transporter, permease component [Clostridium
           botulinum D str. 1873]
 gi|253561547|gb|EES90999.1| amino acid ABC transporter, permease component [Clostridium
           botulinum D str. 1873]
          Length = 215

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 104/209 (49%), Gaps = 14/209 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ +   +LG ++ +           K  K   +LYI++F  +      +    +  ++
Sbjct: 21  IQLTIICVILGSIIGVIV------SGLKLSKYKWVLYIASFYTWLFRGTPMFLQLFFFYY 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L                +  I LS  + A+++EI+R G+I++ +GQ EA  +LG T
Sbjct: 75  GLPFL--------GISLSPMAAAIIGLSLNSGAYMSEIIRGGIISIDKGQFEACKSLGFT 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    V+LPQA R I+P + ++++ +LK++SL  A+   +L+      ++ +G+ +E 
Sbjct: 127 NLQTMTKVILPQAFRIILPSVGNEFITMLKDTSLVSAITMEELMRNAELQMSASGRPVEP 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +I   +YL ++ + A+  + L  K+++ 
Sbjct: 187 FVIAAVLYLLMTTVFAVIFSSLEKKMSMY 215


>gi|330991448|ref|ZP_08315399.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Gluconacetobacter sp. SXCC-1]
 gi|329761467|gb|EGG77960.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Gluconacetobacter sp. SXCC-1]
          Length = 522

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 9/234 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             +G+F      +           + V S +  I++S+    L+ +        +   Y+
Sbjct: 291 FRWGVFFAALTSAAFARGAFITLTVAVLSHLTAIMISI-PMALALNGRNAMLGLVLKGYV 349

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G PTL+ +   +        L QF  I        F++ +I+LS   +A+  EI
Sbjct: 350 SVF--RGAPTLLQLLFIWN------ALPQFLPIFREGWFTPFLATWISLSINESAYQVEI 401

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L AV RGQ  A  ALGL+ R+  R V+ PQA+R  +PP  + +++LLK +SLA  +
Sbjct: 402 NRAALAAVDRGQELAGDALGLSRRQVYRHVIFPQALRIALPPTMNAFISLLKTTSLASVI 461

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L++V    + +T +  E     +  YL +   +     R+  + A  ++ 
Sbjct: 462 SLPELLAVTQMEVARTFEFTEYYAAALVYYLGMVFFLLFVQKRIERRFAWADRH 515



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A   G   T  +A    + A +I   +       N ++  + + YV VFR  P L+ + F
Sbjct: 304 AFARGAFITLTVAVLSHLTAIMISIPMALALNGRNAMLGLVLKGYVSVFRGAPTLLQLLF 363

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           ++ ++   LPI       PF     +  ++     ++ N     
Sbjct: 364 IWNALPQFLPIFREGWFTPFLATWISLSINESAYQVEINRAALA 407


>gi|46579090|ref|YP_009898.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603329|ref|YP_967729.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|46448503|gb|AAS95157.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563558|gb|ABM29302.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 295

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/188 (29%), Positives = 97/188 (51%), Gaps = 4/188 (2%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE----FM 267
           +  + + LP L +   + F + +LVL AL  +        G    +G      E    F+
Sbjct: 107 YVDSVRNLPALVLIFVMYFFISSLVLPALGLEESVRGLPPGGRAVVGWLFAPVEQLSAFL 166

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  + L+ Y  A+I+EIVR+G+ +VPRGQ +A+ + GL   +  R V+LPQA+R  +PPL
Sbjct: 167 SAVVTLAIYEGAYISEIVRAGIESVPRGQWDASSSFGLGPVQQMRHVILPQALRHAVPPL 226

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             Q+++++K+S++   +   +L   G  ++  T Q  EI      +YL L++  +L   R
Sbjct: 227 AGQFISIIKDSAIVSVISVPELTFQGMELMAATYQTFEIWTTIALLYLVLTLGCSLVAER 286

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 287 LERRFRWG 294


>gi|253575035|ref|ZP_04852374.1| glutamine ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845491|gb|EES73500.1| glutamine ABC transporter [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 216

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 106/221 (47%), Gaps = 18/221 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+ ++    V SFVLG ++++F     R    +  +     Y+       L  
Sbjct: 13  YLEGFRGTVLSSLLALVGSFVLGALIAVF-----RIAPVRPLRWFGTGYVEFIRNIPLLL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V I          P+               F +  I L+ YT++FIAE +R+G++A+P+
Sbjct: 68  VVYIFYYGPAALGLPL-------------DGFTAGTIGLAVYTSSFIAEAIRAGILAIPQ 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA + GL++ +    ++LPQA++ +IPPL +Q++NL+KNSS+   V   DL+    
Sbjct: 115 GQTEAARSSGLSYVQTMLHIILPQAIKLVIPPLGNQFINLIKNSSVLTIVAGLDLMYFAD 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   T +  +  +     YL L++ ++  +     ++  K
Sbjct: 175 IVNADTYRTFDTYIFVALFYLVLTLPLSYGVRVWERRLEKK 215



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 37/75 (49%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T  + Y    L GF  T   +   ++ + ++G L+   R++  + + W    YVE  
Sbjct: 1   MDFTILTDYFDVYLEGFRGTVLSSLLALVGSFVLGALIAVFRIAPVRPLRWFGTGYVEFI 60

Query: 137 RNIPPLVVIFFLYKS 151
           RNIP L+V++  Y  
Sbjct: 61  RNIPLLLVVYIFYYG 75


>gi|224542318|ref|ZP_03682857.1| hypothetical protein CATMIT_01497 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524767|gb|EEF93872.1| hypothetical protein CATMIT_01497 [Catenibacterium mitsuokai DSM
           15897]
          Length = 229

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 7/228 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +   +            +  + + +   G++L +    L +       +A+  +Y+  F 
Sbjct: 9   ILTPSNIQFMIFTGAKYSLLLAIGALFFGVILGIIGAAL-KLSKHFVLRAIGNVYVEIF- 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P L+ I     L+   P + Q +  G    +  ++   IA+S  + A+  E++RSG
Sbjct: 67  -RGTPMLLQIMF---LYLAVPTVVQ-SITGQRFQADPYVCGLIAMSLNSGAYQVELIRSG 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V +GQ EA   +GL + +  R V+LPQA + IIPPL S+++ L+K+SSL   +G  +
Sbjct: 122 ILGVDKGQWEACETIGLNYVQTMRYVILPQAFKRIIPPLISEFITLIKDSSLIFTIGAVE 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L++    I   T   +  +     IYL +++ I+     +  ++A+ +
Sbjct: 182 LLATASVIGANTFNYLVPLTATGAIYLVMTLCISAIARYVEGRLAVSD 229



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 43/95 (45%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            + I+   + S+    I  G   +  LA   +    I+G +  A +LS + ++  I  VY
Sbjct: 3   MKTIMDILTPSNIQFMIFTGAKYSLLLAIGALFFGVILGIIGAALKLSKHFVLRAIGNVY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           VE+FR  P L+ I FLY +V +V+           
Sbjct: 63  VEIFRGTPMLLQIMFLYLAVPTVVQSITGQRFQAD 97


>gi|209544821|ref|YP_002277050.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532498|gb|ACI52435.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 517

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 9/229 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +FL+                + V S +  IV+++    L  +  +   K+    Y++ F 
Sbjct: 292 VFLSALASPAFLRGAGVTLVMAVLSHMTAIVIAI-PMALVLNGRDGLLKSGVRAYVALF- 349

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
               PTL+ +   +        L QF  +        F++ +I+LS   AA+  EI R+ 
Sbjct: 350 -RAAPTLLQLLFVWN------ALPQFLPVFREAWFTPFLAAWISLSINEAAYQVEINRAA 402

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+  GQ  A  ALG+T  +  R V+ PQA+R  +PP  +++++L+K +SLA  +   +
Sbjct: 403 LQAIDPGQALAGDALGMTRMQVYRHVIFPQALRIALPPTINEFISLIKTTSLASVISLQE 462

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L++V    + +T    E     +  YL +         R+  + A  ++
Sbjct: 463 LLAVTQINVARTFAFTEYYAAALVYYLLIVFFFLGLQRRIERRFAWADR 511



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  +A    + A +I   +       + L+    R YV +FR  P L+ + F
Sbjct: 301 AFLRGAGVTLVMAVLSHMTAIVIAIPMALVLNGRDGLLKSGVRAYVALFRAAPTLLQLLF 360

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFL 171
           ++ ++   LP+   +   PF    
Sbjct: 361 VWNALPQFLPVFREAWFTPFLAAW 384


>gi|229174829|ref|ZP_04302349.1| Arginine transport system permease protein artQ [Bacillus cereus
           MM3]
 gi|228608497|gb|EEK65799.1| Arginine transport system permease protein artQ [Bacillus cereus
           MM3]
          Length = 225

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 19  PYILKGLEVTLKIVAVSALVGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQIIGYEI-------PAFVAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 225



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +      Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAVSALVGFILGTLLALCKIARIRALNIAADFYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQI 87


>gi|259506393|ref|ZP_05749295.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Corynebacterium
           efficiens YS-314]
 gi|259166034|gb|EEW50588.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Corynebacterium
           efficiens YS-314]
          Length = 318

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            +       L    I        +G       L    +         + V S ++G+V  
Sbjct: 30  WVAAAIILALLAWFIIGALNNEAYGWDTYLTYLFDTRIATAALHTIALTVLSMIIGVVFG 89

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
                + R       + +  LY+  F   G P  V +     L   +    LG       
Sbjct: 90  -ATLAVMRMSGNPVLQGVAWLYLWIF--RGTPIYVQLVFWGLLGSLYQTVNLGFAEIDLQ 146

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           + +S  F+   + L    AA++AEIVRSG+ AVP GQMEA+ ALG+      R  +LPQA
Sbjct: 147 NFLSNMFILAVLGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMGWSLTMRRTVLPQA 206

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  ++ +++LK +SL VAV ++ +L      I     + + ++L+    YL ++
Sbjct: 207 MRIIIPPTGNELISMLKTTSLVVAVPYSLELYGRSMDIAYSLFEPVPMLLVAATWYLVIT 266

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +    L         +
Sbjct: 267 SVLMVGQYYLEKHFEKGSTR 286



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 5/99 (5%)

Query: 83  SSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +Y T +         ++T  L    MI   + G  +   R+S N ++  +  +Y+ +FR
Sbjct: 56  DTYLTYLFDTRIATAALHTIALTVLSMIIGVVFGATLAVMRMSGNPVLQGVAWLYLWIFR 115

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
             P  V + F          +      +    FL+N  +
Sbjct: 116 GTPIYVQLVFWGLLGSLYQTVNLGFAEIDLQNFLSNMFI 154


>gi|157963212|ref|YP_001503246.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           pealeana ATCC 700345]
 gi|157848212|gb|ABV88711.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella pealeana ATCC 700345]
          Length = 226

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 112/221 (50%), Gaps = 15/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      +     +  F+ ++G +L +  T L +   +   +    +Y+S  +I G P +
Sbjct: 21  IYLILNGLKVTLIVTFFAMIIGSILGVATT-LMKMSSKWYLRWPANIYVS--IIRGTPVV 77

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y +            +  +    +  +  IA    + A+I+EI+R+G+ AV +G
Sbjct: 78  VQLVILYFI------------VLAALDVDKITAAVIAFGLNSGAYISEIIRAGIQAVDKG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL+H +  + V+LPQA+++I+P L ++++ LLK +++   +G  DL+  G  
Sbjct: 126 QMEAARSLGLSHGQTMKEVILPQAIKNILPSLGNEFIVLLKETAVIGFIGGVDLMRAGEI 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I ++T +    +     IYL L+ +    ++R   ++   +
Sbjct: 186 IRSRTFEDSVPLFTCALIYLLLTYIFTFMLSRFETRLKQSD 226



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 32/67 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  MI  +I+G      ++S+   + W   +YV + R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMIIGSILGVATTLMKMSSKWYLRWPANIYVSIIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VL+ 
Sbjct: 84  YFIVLAA 90


>gi|57237768|ref|YP_179016.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni RM1221]
 gi|57166572|gb|AAW35351.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni RM1221]
 gi|315058379|gb|ADT72708.1| Putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 261

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L   YI   LI G P LV + L Y +  
Sbjct: 68  LIISFFSLLLSIILGGVFCAFS-LSSIVFLRFLSTFYIE--LIRGTPLLVQVLLIYYIIA 124

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 125 NNLGLDN-----------RYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLK 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 174 EMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 233

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I++F   L  K
Sbjct: 234 YVILAITYLVLTLPISIFSRYLERK 258



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 44/87 (50%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F +      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 40  SFSVSAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFL 99

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 100 STFYIELIRGTPLLVQVLLIYYIIANN 126


>gi|126454206|ref|YP_001067296.1| polar amino acid ABC transporter permease [Burkholderia
           pseudomallei 1106a]
 gi|167825402|ref|ZP_02456873.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 9]
 gi|226193854|ref|ZP_03789456.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237813419|ref|YP_002897870.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242317625|ref|ZP_04816641.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254191836|ref|ZP_04898339.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|126227848|gb|ABN91388.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|157939507|gb|EDO95177.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|225934159|gb|EEH30144.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|237506596|gb|ACQ98914.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|242140864|gb|EES27266.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1106b]
          Length = 219

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAVLTMKFAVASMVLGLIVGLLV-ALVRIGSNRLLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y                         +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYY-----------GLPDIGISLDPTAAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 42/85 (49%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F 
Sbjct: 13  VLAKGAVLTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDIGISLDPTAAGIFTLTLN 97


>gi|315931225|gb|EFV10196.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 259

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L   YI   LI G P LV + L Y +  
Sbjct: 66  LIISFFSLLLSIILGGVFCAFS-LSSIVFLRFLSTFYIE--LIRGTPLLVQVLLMYYIIA 122

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 123 NNLGLDN-----------RYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLK 171

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 172 EMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 231

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I++F   L  K
Sbjct: 232 YVILAITYLILTLPISIFSRYLERK 256



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 43/87 (49%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      ++  ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 38  SFSISAYHFDFSVIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFL 97

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 98  STFYIELIRGTPLLVQVLLMYYIIANN 124


>gi|53720226|ref|YP_109212.1| amino acid ABC transporter permease [Burkholderia pseudomallei
           K96243]
 gi|76809380|ref|YP_334465.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|126441781|ref|YP_001060017.1| polar amino acid ABC transporter permease [Burkholderia
           pseudomallei 668]
 gi|134280168|ref|ZP_01766879.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 305]
 gi|167739770|ref|ZP_02412544.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 14]
 gi|167816990|ref|ZP_02448670.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 91]
 gi|167846892|ref|ZP_02472400.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei B7210]
 gi|167912120|ref|ZP_02499211.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 112]
 gi|254180992|ref|ZP_04887590.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254258358|ref|ZP_04949412.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|254298887|ref|ZP_04966337.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|288553017|ref|ZP_03452533.2| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 576]
 gi|52210640|emb|CAH36624.1| putative ABC-family amino acid transporter, permease component
           [Burkholderia pseudomallei K96243]
 gi|76578833|gb|ABA48308.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1710b]
 gi|126221274|gb|ABN84780.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 668]
 gi|134248175|gb|EBA48258.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 305]
 gi|157808749|gb|EDO85919.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|184211531|gb|EDU08574.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254217047|gb|EET06431.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|288279724|gb|EEC36457.2| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei 576]
          Length = 219

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAALTMKFAVASMVLGLIVGLLV-ALVRIGSNRLLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y                         +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYY-----------GLPDIGISLDPTAAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F 
Sbjct: 13  VLAKGAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDIGISLDPTAAGIFTLTLN 97


>gi|331700561|ref|YP_004397520.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329127904|gb|AEB72457.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 467

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 113/252 (44%), Gaps = 15/252 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V F+  +   S +P+  +S    FG+  +N       + M     I    F     +  
Sbjct: 229 IVKFYTGEHSKSAIPVQSNSDRTYFGLLKSNATSFGNGIKMTLEITIVAIFFA---TIIG 285

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               +      K  + L   Y   F      ++ ++ L + ++   P L           
Sbjct: 286 IILGILGATPNKFLRGLSSTYAFVF-----KSIPVMVLAFFVYIGIPNLTG-------EK 333

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I +    +A+ A  VR G+ AV  GQMEAA + G+++ +A R ++LPQA+R 
Sbjct: 334 IPLFIAGVITIVMENSAYTASFVRGGIEAVEGGQMEAARSNGMSYFQAMRYIVLPQALRI 393

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           + P   +Q++  LK +S+  A+G A+L   G  II++  +  ++ L+   +YL++  +++
Sbjct: 394 MAPSFINQFIIALKGTSVLSAIGVAELTQQGTIIISRNMEGFKVWLLVSLMYLAMIGLLS 453

Query: 383 LFMNRLNAKIAL 394
              N +     L
Sbjct: 454 YLSNLVKKHYQL 465



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 38/72 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S AT+   G   T  +    +  ATIIG ++G    + NK +  +   Y  VF++IP +V
Sbjct: 258 SNATSFGNGIKMTLEITIVAIFFATIIGIILGILGATPNKFLRGLSSTYAFVFKSIPVMV 317

Query: 144 VIFFLYKSVLSV 155
           + FF+Y  + ++
Sbjct: 318 LAFFVYIGIPNL 329


>gi|15806050|ref|NP_294752.1| amino acid ABC transporter permease [Deinococcus radiodurans R1]
 gi|6458756|gb|AAF10601.1|AE001954_5 amino acid ABC transporter, permease protein [Deinococcus
           radiodurans R1]
          Length = 216

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 13/222 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L F         KI   S VLG+V       L+R    K    L L +I   L+ G P
Sbjct: 8   QNLPFLLQGALMTIKITALSLVLGVVGGTLV-ALARLSPFKPLSWLALTFIE--LVRGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + +   F  P L +           EF +   A S  +AA++AEIVR+G+  +P
Sbjct: 65  LLVQIFVIF---FGLPQLLEHPI-------NEFWAGVAAFSVNSAAYVAEIVRAGIQGLP 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA+ +LGL+  +  R ++LPQA   ++PPL ++ ++LLKNSSL  A+   +L   G
Sbjct: 115 KGQTEASRSLGLSPAQTMRHIILPQAFTRVLPPLVNEAISLLKNSSLLSAISIVELTRAG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + ++T +  E+ L    IYL++++ ++    RL A+  ++
Sbjct: 175 QLVSSRTFKPFEMYLAVSLIYLAMTLFLSWVARRLEARWQVR 216



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 39/82 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    ++   + GTLV   RLS  K ++W+   ++E+ R  P LV IF +
Sbjct: 13  LLQGALMTIKITALSLVLGVVGGTLVALARLSPFKPLSWLALTFIELVRGTPLLVQIFVI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
           +  +  +L  P +        F
Sbjct: 73  FFGLPQLLEHPINEFWAGVAAF 94


>gi|311069227|ref|YP_003974150.1| glutamine ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310869744|gb|ADP33219.1| glutamine ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 216

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 10/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N   L+             + + V+ +  S     L       T K  PL +  T  + 
Sbjct: 1   MNFSILTDNLDMYLDGFYHTLLASVIALAGSFVLGVLVAVMRITTFK--PLQWTGTAYVE 58

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  + L+ + +   F  P                F +  IAL+ YT+AFIAE +R+G+ 
Sbjct: 59  FIRNIPLLLITFVFFFGLP--------NAGVKLDGFQAGTIALTIYTSAFIAEAIRAGIQ 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEAA + G T+ +A   ++LPQA++ ++PPL +Q+LNL+KNSS+   V   DL+
Sbjct: 111 SVSKGQMEAARSSGFTYSQAMLYIILPQAIKIVMPPLGNQFLNLVKNSSILGVVAGLDLM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                + ++T    ++ +     YL L+I ++L +  L  ++   
Sbjct: 171 YQADLVSSRTLVVFDVYIFVALFYLVLTIPLSLGVTYLEKRLERS 215



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF +T   +   +  + ++G LV   R++  K + W    YVE  RNIP L++ F  
Sbjct: 13  YLDGFYHTLLASVIALAGSFVLGVLVAVMRITTFKPLQWTGTAYVEFIRNIPLLLITFVF 72

Query: 149 YKSVLSV 155
           +  + + 
Sbjct: 73  FFGLPNA 79


>gi|237752093|ref|ZP_04582573.1| polar amino acid ABC transporter [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376660|gb|EEO26751.1| polar amino acid ABC transporter [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 232

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 11/227 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+       +   ++G +L++  T+  +   E+    +  LY+  F   G
Sbjct: 17  YALVLEGIWVTIVLAVCGLLIGIIIGTLLAILLTKDEKSAFERVLVFIGRLYVGFF--RG 74

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V +   Y +     +L  F   G S      +   +     + A+++EI+R G+++
Sbjct: 75  TPIVVQLLFIYFV-----ILPLFGLAGSS----ALLVAVVIFGLNSGAYVSEIIRGGILS 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA ALGL  +++ R V+ PQA+++ +P L ++++ LLK +S+A  V   DL  
Sbjct: 126 VDSGQNEAARALGLNSKQSMRFVVFPQALKNALPNLGNEFITLLKETSVANYVTVHDLTY 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              TI + + + +         YL L I+ +  + +   K+   +K+
Sbjct: 186 AFKTIGSASYEYMIPYFFLAVCYLVLVILASFIVKKYEGKLRRSDKR 232


>gi|258405216|ref|YP_003197958.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257797443|gb|ACV68380.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 227

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 13/228 (5%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              F   +    +       +    I +     G +L + A  L R       K +  +Y
Sbjct: 4   NFQFDYSVIWESVPALLDGAELTLIITIVGCFFGFILGVTAGLL-RLSKVTAIKKVSGIY 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + +  + G P +V +     L+F  P+             P   +  +A++  + A+IAE
Sbjct: 63  VES--VRGTPLMVQVMF---LYFGLPMALGMRI-------PPLTAGIVAIAVNSGAYIAE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  + ++  GQ+EA  ++GLT  +  R ++ PQA + +IPPL +Q++  LK++SL V 
Sbjct: 111 IVRGAVQSIEPGQVEAGRSIGLTAPQTMRYIVWPQAFKRMIPPLGNQFIISLKDTSLLVV 170

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +G  +L   G  II    +A E+ L    +YL++++ I+ F+  + ++
Sbjct: 171 IGVGELTRSGQEIIAVNFRAFEVWLTVAVMYLAITMGISKFLRIIESR 218



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y+       A+L G   T  +   G     I+G   G  RLS    +  +  +YVE  R
Sbjct: 8   DYSVIWESVPALLDGAELTLIITIVGCFFGFILGVTAGLLRLSKVTAIKKVSGIYVESVR 67

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P +V + FLY  +   L +
Sbjct: 68  GTPLMVQVMFLYFGLPMALGM 88


>gi|75906962|ref|YP_321258.1| amino acid ABC transporter permease [Anabaena variabilis ATCC
           29413]
 gi|75700687|gb|ABA20363.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein / neutral amino acid ABC
           transporter membrane protein [Anabaena variabilis ATCC
           29413]
          Length = 308

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/183 (31%), Positives = 93/183 (50%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
            +  F  D R   I+ Q+I   L   +    + N+  N+++  +  G  FL ++A F+I 
Sbjct: 4   EKPPFWRDNRFWYIAGQLIALFLAAFVVTILLGNLNRNLQRLGIQFGFDFLKQQASFDIG 63

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + ++ Y    +Y+ A+ VG +N+  +AF G+I  TI+G++ G  RLS N LV  I  VYV
Sbjct: 64  ETLIAYKPTDTYSLALWVGLINSLRIAFVGVILTTIVGSIAGIARLSDNWLVRNISLVYV 123

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRN P L+ + F Y +V   LP  D+ I L   + L+  GL  P  T        +  
Sbjct: 124 EIFRNTPLLLQLLFWYFAVFLGLPKADNKISLGGFISLSQNGLELPWFTFSPEFSALLLG 183

Query: 194 FVL 196
            + 
Sbjct: 184 LIF 186



 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 89/224 (39%), Positives = 125/224 (55%), Gaps = 15/224 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I     +L  ++   A  ++R       + + L+Y+  F    L  L L+   + +  
Sbjct: 87  LRIAFVGVILTTIVGSIAG-IARLSDNWLVRNISLVYVEIFRNTPL-LLQLLFWYFAVFL 144

Query: 247 DKPVLGQFNFIGGS-------------TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             P       +GG              T SPEF +L + L  YT AFIAEIVR G+ +V 
Sbjct: 145 GLPKADNKISLGGFISLSQNGLELPWFTFSPEFSALLLGLIFYTGAFIAEIVRGGIQSVS 204

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA  +LGL      RLV+ PQA+R IIPPLTSQYLNL KNSSLA+A+G+ D+  V 
Sbjct: 205 KGQWEAGRSLGLNPSLIMRLVIFPQALRVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVA 264

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            T  NQTG+A+E++L+ M  YLSLS+ I+L MN  N  + +KE+
Sbjct: 265 STTFNQTGKAVEVMLLLMLTYLSLSLTISLIMNAFNRTVQIKER 308


>gi|53725952|ref|YP_103705.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia mallei
           ATCC 23344]
 gi|67643969|ref|ZP_00442712.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei GB8 horse 4]
 gi|121601039|ref|YP_992121.1| polar amino acid ABC transporter permease [Burkholderia mallei
           SAVP1]
 gi|124386639|ref|YP_001028567.1| polar amino acid ABC transporter permease [Burkholderia mallei NCTC
           10229]
 gi|126450004|ref|YP_001081536.1| polar amino acid ABC transporter permease [Burkholderia mallei NCTC
           10247]
 gi|166998336|ref|ZP_02264196.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei PRL-20]
 gi|254175602|ref|ZP_04882262.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|254202403|ref|ZP_04908766.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei FMH]
 gi|254207734|ref|ZP_04914084.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei JHU]
 gi|254356366|ref|ZP_04972642.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei 2002721280]
 gi|52429375|gb|AAU49968.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei ATCC 23344]
 gi|121229849|gb|ABM52367.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei SAVP1]
 gi|124294659|gb|ABN03928.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei NCTC 10229]
 gi|126242874|gb|ABO05967.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei NCTC 10247]
 gi|147746650|gb|EDK53727.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei FMH]
 gi|147751628|gb|EDK58695.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei JHU]
 gi|148025363|gb|EDK83517.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei 2002721280]
 gi|160696646|gb|EDP86616.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei ATCC 10399]
 gi|238525444|gb|EEP88872.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia mallei GB8 horse 4]
 gi|243065405|gb|EES47591.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia mallei PRL-20]
          Length = 219

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAALTMKFAVASMVLGLIVGLLV-ALVRIGSNRLLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G ++ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDI----------GISLDPT-AAGIFTLTLNAGAYLSENMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F 
Sbjct: 13  VLAKGAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDIGISLDPTAAGIFTLTLN 97


>gi|300856478|ref|YP_003781462.1| putative amino acid ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300436593|gb|ADK16360.1| predicted ABC-type aminoacid transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 212

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 19/230 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   M +    LS   +T+       +FS  LG +++L      +    K  KA+  LY 
Sbjct: 1   MSDIMDITGFILSGSLITIQLFFITAIFSIPLGCLVAL-----GKISKIKPIKAVLSLYT 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ +   Y   F  PV+                +  IA +   AA++AEI
Sbjct: 56  WAF--RGTPLLLQLFFTY---FGLPVI--------GIRLSPLAAASIAFTINYAAYLAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+ ++ +GQ EA+  LG+ + +    +++PQA+R++IPP+ ++ +NL+K+S+L   +
Sbjct: 103 FRSGIESIDKGQFEASKVLGMNYCQTMIKIIIPQAIRNVIPPVCNESINLIKDSALVATI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  DL+     ++ +    I   +I   +YL L+ ++ +   +L  K ++
Sbjct: 163 GVGDLLRAAKEVVTRDF-TITPFIIAAILYLILTSVLVMAFRKLEKKYSI 211



 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L F   I +  +G LV  G++S  K +  +  +Y   FR  P L+ +FF 
Sbjct: 11  ILSGSLITIQLFFITAIFSIPLGCLVALGKISKIKPIKAVLSLYTWAFRGTPLLLQLFFT 70

Query: 149 YKSVL 153
           Y  + 
Sbjct: 71  YFGLP 75


>gi|239833265|ref|ZP_04681593.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821328|gb|EEQ92897.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 231

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 14/228 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N+  L F          +   +F+ G ++  F   L R    +  + +   Y+   LI 
Sbjct: 5   FNHNHLIFLLEGALWTVILTGMAFIGGGIVG-FIVALGRITPSRALRLIAATYVQ--LIQ 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV++ + Y   F  P L       G +++P F +  I+L+ Y +A++ EI R  L 
Sbjct: 62  GTPLLVIMFIIY---FGLPTL-------GFSITPLFAAG-ISLTIYVSAYLGEIWRGCLE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+ Q E A  L L+  +    V+LPQA+R   PP     + ++KN+SLA  VGF +L 
Sbjct: 111 SVPKAQWEGAECLALSRTQRMFKVILPQAVRIATPPTVGFSVQIVKNTSLASVVGFVELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G  I N   +   I LI   +Y  L   ++ F  RL      +  +
Sbjct: 171 RAGQLINNSIFEPFLIYLIVAALYFCLCFPLSAFSQRLENMGPRRRNR 218



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 41/104 (39%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   +L G + T  L     I   I+G +V  GR++ ++ +  I   YV++ +  P LV
Sbjct: 8   NHLIFLLEGALWTVILTGMAFIGGGIVGFIVALGRITPSRALRLIAATYVQLIQGTPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           ++F +Y  + ++             + +               +
Sbjct: 68  IMFIIYFGLPTLGFSITPLFAAGISLTIYVSAYLGEIWRGCLES 111


>gi|222087756|ref|YP_002546293.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725204|gb|ACM28360.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 226

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + L    L                   +  +L    T ++R F  K   A+   Y+
Sbjct: 1   MEHWLQLMWESLGTLLWAGLVFTIPLTLITFVLGLLLGLVTAVTRLFGPKPLVAVARFYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             ++I G P LV + + +                   +   F +  I  +    A+ +EI
Sbjct: 61  --WVIRGTPLLVQLFVIFY-----------GLPSMGILLDAFPAAVIGFTLNVGAYSSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ + +VP+GQ EAA ++G+  R+A    +LPQA R  +PPL++ +++L+K++SLA A+
Sbjct: 108 IRAVISSVPKGQWEAAYSIGMNWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +L      I+  T + + + +    IYL LS  ++     L  + A  
Sbjct: 168 TVPELFQAAQRIVATTYEPLILYIEAAIIYLVLSTFLSTLQGYLERRFARS 218



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 37/90 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S  T +  G V T  L     +   ++G +    RL   K +  + R YV V R  P L
Sbjct: 10  ESLGTLLWAGLVFTIPLTLITFVLGLLLGLVTAVTRLFGPKPLVAVARFYVWVIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S+  + D       G  LN
Sbjct: 70  VQLFVIFYGLPSMGILLDAFPAAVIGFTLN 99


>gi|259416063|ref|ZP_05739983.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
 gi|259347502|gb|EEW59279.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
          Length = 268

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 14/258 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--- 202
           ++L    L+ L +            + N       +T+      F  + VLG+ L+L   
Sbjct: 15  WWLVAVGLTALYLGIEVARSDVYAQIMNTLWRGVGITVFVTVVSFFSASVLGMALALGAD 74

Query: 203 ---FATRLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIG 258
                 R    F+ +  + +P++ +  ++ F L P LV +            +   NF  
Sbjct: 75  SRWLVLRQICRFYVEVVRGVPIIVLLLYVAFVLAPALVDLRNWLGSFIGLEEIRTRNF-- 132

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                P      +AL    +AFIAE+ R+GL +VP GQ+EAA ALGL   +  R ++ PQ
Sbjct: 133 -----PLLWRAIVALMIAYSAFIAEVFRAGLQSVPEGQVEAAKALGLNCWQRFRFIVFPQ 187

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R+I+PPL + ++ L+K+SSL   +G  D+  +G        +  E   +   IYL+++
Sbjct: 188 AIRTILPPLGNDFVALVKDSSLVSVLGVLDITQLGKVTAASNFRYFETYNMVALIYLAMT 247

Query: 379 IMIALFMNRLNAKIALKE 396
           I ++L +  L   +  K+
Sbjct: 248 ISLSLGLRALERHLRNKQ 265



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 3/128 (2%)

Query: 77  VPYTSDSSYAT---AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +       YA     +  G   T ++       A+++G  +  G  S   ++  ICR YV
Sbjct: 29  IEVARSDVYAQIMNTLWRGVGITVFVTVVSFFSASVLGMALALGADSRWLVLRQICRFYV 88

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV R +P +V++ ++   +   L    + +    G+                   I   +
Sbjct: 89  EVVRGVPIIVLLLYVAFVLAPALVDLRNWLGSFIGLEEIRTRNFPLLWRAIVALMIAYSA 148

Query: 194 FVLGIVLS 201
           F+  +  +
Sbjct: 149 FIAEVFRA 156


>gi|257455729|ref|ZP_05620957.1| octopine transport system permease protein OccM [Enhydrobacter
           aerosaccus SK60]
 gi|257446857|gb|EEV21872.1| octopine transport system permease protein OccM [Enhydrobacter
           aerosaccus SK60]
          Length = 241

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 3/208 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V S +LG +L++    L+R   +   +ALP  YI  F   G P LV I L Y    
Sbjct: 23  IELVVLSGLLGFMLAVPL-ALARLSKKPWVQALPFAYIFFF--RGTPLLVQIFLIYYGLS 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               + +        ++  F    IA +  TAA+ AEI+R  + ++P+G+ EAA A+G++
Sbjct: 80  QFKWVTESVLWKSGVLASPFWCAIIAFTLNTAAYTAEIIRGAIKSIPKGENEAADAIGMS 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R ++ P+A   ++P   ++ + +LK S+LA  +   D+  V  TI+++T    E+
Sbjct: 140 YSQKLRRIIFPRAFGIMLPAYGNEVIFMLKGSALASTITLMDITGVATTIMSKTYTVFEL 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 IYL LS ++         +I  
Sbjct: 200 FFASGIIYLLLSWLLIGMFRLAEKRINR 227



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 1/99 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L     +   ++   +   RLS    V  +   Y+  FR  P LV IF +
Sbjct: 15  LLQGSIITIELVVLSGLLGFMLAVPLALARLSKKPWVQALPFAYIFFFRGTPLLVQIFLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y   LS       S++   G+  +    +    T++T A
Sbjct: 75  YYG-LSQFKWVTESVLWKSGVLASPFWCAIIAFTLNTAA 112


>gi|163743971|ref|ZP_02151340.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis 2.10]
 gi|161382731|gb|EDQ07131.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis 2.10]
          Length = 273

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               R    F+ +  + +P++ +  ++ F L P LV +      +     +   NF    
Sbjct: 82  WLVIRQGARFYIEVVRGIPIIVLLLYVAFVLAPALVELRNWLGDYIGLDPIRTRNF---- 137

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
              P      IAL    +AFI+E+ R+GL +V  GQ+EAA +LGL+     R ++ PQA+
Sbjct: 138 ---PLLWRAIIALMIAYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAI 194

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+PPL + ++ L+K+SSL   +G AD+  +G        +  E   +   IYL+L+I 
Sbjct: 195 RTILPPLGNDFVALVKDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIG 254

Query: 381 IALFMNRLNAKIALKEKK 398
           ++L + R    +  +E++
Sbjct: 255 LSLLLRRFEKHLRRREER 272


>gi|86360052|ref|YP_471941.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli CFN
           42]
 gi|86284154|gb|ABC93214.1| probable amino acid ABC transporter, ATP-binding protein [Rhizobium
           etli CFN 42]
          Length = 591

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +     +   + S    P     +    F     L     T+   A   +   +LG  L+
Sbjct: 41  IFAAVVIIAVLYSTFTNPRWGWGVFAEWFFAEPVLVGLGRTLLLTALAAISGSILGTALA 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGS 260
           L     S      +   + LL     ++  L    L  L   +    P     F      
Sbjct: 101 LARVSKSPLLSGLSWGYIWLLRSIPVIVLLLILNNLGYLYETIEIGIPFTDTVFIDYPTV 160

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F + ++ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAM
Sbjct: 161 QLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAM 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           RSI+P   ++ + L K++S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 221 RSILPTGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTV 280

Query: 381 IALFMNRLNAKIALKEKK 398
           +++  + +    +    +
Sbjct: 281 LSVAQHYIERYFSRGAVR 298



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 20/210 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-----PLVV 144
           LVG   T  L     I  +I+GT +   R+S + L++ +   Y+ + R+IP      ++ 
Sbjct: 75  LVGLGRTLLLTALAAISGSILGTALALARVSKSPLLSGLSWGYIWLLRSIPVIVLLLILN 134

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL---- 200
                   + +      ++ + +         +   L +  N   F    V G +L    
Sbjct: 135 NLGYLYETIEIGIPFTDTVFIDYPTVQLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDH 194

Query: 201 -------SLFATRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                  +L   R  + F     +A    LP  +     +    ++V +    +L +   
Sbjct: 195 GQLEAAAALGLPRRRQAFRIVLPQAMRSILPTGFNELIGLAKSTSMVYVLALPELFYTVQ 254

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           V+ + N      +    +   I ++  + A
Sbjct: 255 VIYRRNLEVIPLLMVATVWYLIIMTVLSVA 284


>gi|145630170|ref|ZP_01785952.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae R3021]
 gi|145636469|ref|ZP_01792137.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittHH]
 gi|148828241|ref|YP_001292994.1| ABC-type amino acid transport system permease [Haemophilus
           influenzae PittGG]
 gi|260581868|ref|ZP_05849664.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae NT127]
 gi|144984451|gb|EDJ91874.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae R3021]
 gi|145270294|gb|EDK10229.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittHH]
 gi|148719483|gb|ABR00611.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittGG]
 gi|260095061|gb|EEW78953.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae NT127]
 gi|309973450|gb|ADO96651.1| L-cystine ABC transporter, permease component TcyB [Haemophilus
           influenzae R2846]
          Length = 238

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP                   +    T+      F    ++ +++++  T
Sbjct: 1   MILLNNWLASLPFMSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             S +   K  +AL  +YIS  +I G P LV I + +   +  P +       G T+ P 
Sbjct: 61  LPSPNLPLKLLQALCRVYIS--IIRGTPMLVQIFIIF---YGLPEV-------GITLEP- 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+A    ++PQA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQAFIRTIMPQALRISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +++ +K++SLA  V   +L  V   I     + I I      IY     +++   
Sbjct: 168 SLSNTFISTVKDTSLASLVLVTELFRVAQNITAANYEFILIYSEAALIYWIFCFVLSFLQ 227

Query: 386 NRLNAKIAL 394
           +RL  +++ 
Sbjct: 228 DRLEIRLSR 236



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFR 137
           SS+   +    + T  LA        +I  +V   R   +      L+  +CRVY+ + R
Sbjct: 24  SSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYISIIR 83

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             P LV IF ++  +  V    +          +N    +  T+     A 
Sbjct: 84  GTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAI 134


>gi|115351506|ref|YP_773345.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|172060525|ref|YP_001808177.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115281494|gb|ABI87011.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|171993042|gb|ACB63961.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 259

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  ++L++   R S                L   Y+S  L+ G P LV I +
Sbjct: 55  VLSMVFGLLGAVMLAMMGIRQSEPLEGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 112

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 113 IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 161

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 162 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAAT 221

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    +Y  L  ++         +++L  + 
Sbjct: 222 YQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPARH 259


>gi|313632218|gb|EFR99284.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri
           FSL N1-067]
 gi|313636716|gb|EFS02380.1| His/Glu/Gln/Arg/opine ABC transporter permease [Listeria seeligeri
           FSL S4-171]
          Length = 226

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 15/233 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +   G F    G  F   T+ T A       + G V       L +    +  +     Y
Sbjct: 9   MFQDGSFYEKYGNYFIKGTLITIALA-AIGVLCGAVFGSLL-ALMKLAKTRWLRWPASCY 66

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I    + G P L+ I + +           F           F+S  IALS  +AA++AE
Sbjct: 67  IEF--VRGTPLLIQIFIVF-----------FGTQIIGLDVSAFVSGCIALSLNSAAYVAE 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L ++++ ++K SS+   
Sbjct: 114 IIRAGISAVNKGQMEAARSLGMTQSASMRYIILPQAVKNILPALGNEFVTVIKESSIVSV 173

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G  +L+ + G +   + +    ++I   IY  L+  ++  +     ++   +
Sbjct: 174 IGVTELMFMTGVVQGASFKPFIPLVITSLIYFVLTFSLSRLLGVAERRMRTSD 226



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  LA  G++   + G+L+   +L+  + + W    Y+E  R  P L+ 
Sbjct: 19  YGNYFIKGTLITIALAAIGVLCGAVFGSLLALMKLAKTRWLRWPASCYIEFVRGTPLLIQ 78

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 79  IFIVFFGT 86


>gi|311898351|dbj|BAJ30759.1| putative amino acid ABC transporter substrate-binding protein
           [Kitasatospora setae KM-6054]
          Length = 315

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/270 (19%), Positives = 112/270 (41%), Gaps = 14/270 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +  L  +  + +    +   P            ++  L    +T+       V  F 
Sbjct: 31  WRLVAGLAALVLVVQFAHGLAVNPGWDWPTFRAFVFSDSILRAVGMTIQLTVYGTVLGFA 90

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DK 248
           LG V++       R       + +   Y+  F    +P +V +   + L +         
Sbjct: 91  LGAVVAAL-----RLSGSPILRTIAWTYVWAF--RSIPLIVQLVFWFNLSYLYKRFGIGI 143

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F       +     +  + L+ + AA+ AEI+R G+++V  GQ+EAA ALG+   
Sbjct: 144 PFGPSFVSFETMDLLGALGAAVLGLALHQAAYAAEIIRGGVLSVDAGQLEAAAALGIPKF 203

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    +++PQAMR I+P   ++ ++L K +S+   +   +L      I  +TG+ + +++
Sbjct: 204 RQAWRIVVPQAMRGILPNAANEVVSLFKGTSIVYVMAIGELFYQVQVIYGRTGRVVPLLM 263

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    Y+ L+  ++L    +    A   ++
Sbjct: 264 VATVWYVLLTTALSLVQYYVERYFARGSER 293



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 48/157 (30%), Gaps = 4/157 (2%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
               +    S   A+ +    T  L   G +    +G +V A RLS + ++  I   YV 
Sbjct: 60  TFRAFVFSDSILRAVGM----TIQLTVYGTVLGFALGAVVAALRLSGSPILRTIAWTYVW 115

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR+IP +V + F +                P  +      L            +   ++
Sbjct: 116 AFRSIPLIVQLVFWFNLSYLYKRFGIGIPFGPSFVSFETMDLLGALGAAVLGLALHQAAY 175

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
              I+     +  +          +P    +  ++  
Sbjct: 176 AAEIIRGGVLSVDAGQLEAAAALGIPKFRQAWRIVVP 212


>gi|118479346|ref|YP_896497.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|228947870|ref|ZP_04110157.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|118418571|gb|ABK86990.1| L-arginine ABC transporter membrane protein [Bacillus thuringiensis
           str. Al Hakam]
 gi|228811857|gb|EEM58191.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 225

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 19  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DLYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 225



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +     +Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADLYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQI 87


>gi|187924662|ref|YP_001896304.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187715856|gb|ACD17080.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 225

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   +           +     + + SF +G+ L+ F   L R F  K   A+   Y
Sbjct: 1   MPAWLHLMAQSLWPLLYAGLVFTVPLTLISFAIGLALA-FLVALVRLFGPKWAVAIVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F   G P LV + + +                   V     +  I  S    A+ +E
Sbjct: 60  VWLF--RGSPLLVQLFVIFY-----------GLPNVGIVLDPLTAAIIGFSLNVGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P+GQ EAA ++G+T  +A R  +LPQA R  +PPL++ ++ L+K++SLA  
Sbjct: 107 VIRGVIESIPKGQWEAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I + T + + +      +YL  S +++    RL  K   
Sbjct: 167 LTVPEVFQAAQRIASVTYEPLILYTEAALVYLVFSSVLSSAQVRLERKFGR 217



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 35/94 (37%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S    +  G V T  L          +  LV   RL   K    I R YV +FR 
Sbjct: 6   HLMAQSLWPLLYAGLVFTVPLTLISFAIGLALAFLVALVRLFGPKWAVAIVRFYVWLFRG 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P LV +F ++  + +V  + D       G  LN
Sbjct: 66  SPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLN 99


>gi|168180087|ref|ZP_02614751.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|182668974|gb|EDT80950.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
          Length = 219

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 13/227 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     +  R L F         KI + SF++ I L+     L  +   K    +   Y+
Sbjct: 1   MELNFDIIFRNLPFLLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYL 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ +   Y                        ++  I L+   AA+++EI
Sbjct: 61  EIF--RGSPLLIQLFFIYY-----------GLPSVGIAMDAEVAAVIGLALNGAAYMSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + + +LLK++SL   +
Sbjct: 108 IRAAIISIDRGQEEAGFSLGYTRFQNLHYIILPQAVKISVPPLVNGFSSLLKDTSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L   G  I ++T +  E+ L     Y  L+ ++++    +  +
Sbjct: 168 SITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEKR 214



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           +L   + T  +     I A  +  +VG  R     K++  I   Y+E+FR  P L+ +FF
Sbjct: 15  LLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYLEIFRGSPLLIQLFF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +Y  + SV    D  +    G+ LN     
Sbjct: 75  IYYGLPSVGIAMDAEVAAVIGLALNGAAYM 104


>gi|157415203|ref|YP_001482459.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157386167|gb|ABV52482.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni 81116]
 gi|307747845|gb|ADN91115.1| Putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni M1]
          Length = 261

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L   YI   LI G P LV + L Y +  
Sbjct: 68  LIISFFSLLLSIILGGVFCAFS-LSSIVFLRFLSTFYIE--LIRGTPLLVQVLLMYYIIA 124

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 125 NNLGLDN-----------RYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLK 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 174 EMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 233

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I++F   L  K
Sbjct: 234 YVILAITYLILTLPISIFSRYLERK 258



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 43/87 (49%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      ++  ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 40  SFSISAYHFDFSVIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFL 99

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 100 STFYIELIRGTPLLVQVLLMYYIIANN 126


>gi|317054240|ref|YP_004118265.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952235|gb|ADU71709.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 241

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 12/231 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-LPLLYISTF 227
           M ++     F +      A + +   +  ++  +    +     E   +A   L +   +
Sbjct: 1   MSIDLMWQYFLSPEFLQGAWMTLLITLCSLLCGVVLGLVLALLQEAPFRAGKGLAFFYLW 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L  G P L  I   Y +             G       F    +ALS    A++AEI+RS
Sbjct: 61  LFRGTPVLFQIIFVYNV-----------LPGFGLRFSAFTCAVLALSLNEGAYMAEILRS 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL AV  GQ  A +ALG+T+ +  R ++LPQA R ++PP+ +Q +++LK+S+L   +   
Sbjct: 110 GLQAVKSGQRTAGMALGMTNAQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQ 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+ V     + + +  E +      YL L+ +  +F + L   +  K+++
Sbjct: 170 ELLLVANQTASASFRYFEALCAAGIYYLLLTTLFMIFQSWLERTLDPKQRR 220


>gi|261400733|ref|ZP_05986858.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria lactamica ATCC 23970]
 gi|269209498|gb|EEZ75953.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria lactamica ATCC 23970]
          Length = 248

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/191 (29%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + + LLY++ F   G P  V I +   + F   V             +         
Sbjct: 60  WALRKVSLLYVTLF--RGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAVELRRGYGPL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALVANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLEKRYNPQHR 248


>gi|220910019|ref|YP_002485330.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7425]
 gi|219866630|gb|ACL46969.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7425]
          Length = 305

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 11/234 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYI 224
                L     ++       V + ++G++  +      +  R     + +  +  PLL  
Sbjct: 76  YWRALLVGLVNSLRVMISGIVLATIVGVLAGIARLSDNWLMRQLATLYVEILRNAPLLLQ 135

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAE 283
             F  F    +V ++L   + F    L Q    +G   +SPEF +L + L+ YT  FIAE
Sbjct: 136 LLFWYF----VVFLSLPQGISFLGFSLSQTGISLGELNLSPEFCALLLGLTFYTGTFIAE 191

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR G+ +VPRGQ EAA +LGL   +   LV+ PQ++R+I+PPL +QYLNL KNSSLA+A
Sbjct: 192 IVRGGIQSVPRGQWEAARSLGLKPAQTLWLVIFPQSLRAIVPPLGNQYLNLAKNSSLALA 251

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           VG+ DL +V  T  NQTG+A+E++L+ +  YLSLS+ I+L +N  N ++ L E+
Sbjct: 252 VGYPDLYAVASTTYNQTGRAVEMMLLILITYLSLSLSISLLLNLYNRRVQLPER 305



 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 2/187 (1%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           R     D R   I+ Q I  L++ ++ L+  NN+  N+++  L    GFL+ +AGF I +
Sbjct: 6   RPPLWRDSRFWQIAGQAIALLVVVLLLLFLGNNLRQNLQRLGLQPDFGFLNFQAGFSIGE 65

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
             + Y    SY  A+LVG VN+  +  SG++ ATI+G L G  RLS N L+  +  +YVE
Sbjct: 66  TPLDYKPTYSYWRALLVGLVNSLRVMISGIVLATIVGVLAGIARLSDNWLMRQLATLYVE 125

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           + RN P L+ + F Y  V   LP       L F +      L    L+ +  A +   +F
Sbjct: 126 ILRNAPLLLQLLFWYFVVFLSLPQGISF--LGFSLSQTGISLGELNLSPEFCALLLGLTF 183

Query: 195 VLGIVLS 201
             G  ++
Sbjct: 184 YTGTFIA 190


>gi|171778684|ref|ZP_02919780.1| hypothetical protein STRINF_00632 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282641|gb|EDT48065.1| hypothetical protein STRINF_00632 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 228

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 117/231 (50%), Gaps = 10/231 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +T+  +A +  F  ++GI+++L      +  + K    +   
Sbjct: 1   MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALV-----KRTNIKILNWIASF 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF       F  +         +   I +S  + A+I
Sbjct: 56  YVWVF--RGTPMVVQIMIAFAWMHFSNAPTIGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+    A R V+LPQA+++I+P L ++++ ++K+SSL 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G  +L +   +++  T   I  +L   F YL ++ +++  + +L  ++
Sbjct: 172 QTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVLSFLLKKLENRM 222



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y      G + T  ++   +   TIIG LV   + +  K++ WI   YV VF
Sbjct: 1   MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALVKRTNIKILNWIASFYVWVF 60

Query: 137 RNIPPLVVIFFLYKSV 152
           R  P +V I   +  +
Sbjct: 61  RGTPMVVQIMIAFAWM 76


>gi|303254039|ref|ZP_07340157.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|302599019|gb|EFL66047.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
          Length = 227

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTVLISICVVFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQVGILG--VDLSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 227



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTVLISICVVFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|170024600|ref|YP_001721105.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|169751134|gb|ACA68652.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
          Length = 220

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 95/193 (49%), Gaps = 13/193 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            + R  H      +   Y+S F   G P +  + + Y        L QF           
Sbjct: 41  AMMRLSHFWPFSLISRFYVSIF--RGTPLIAQLFMIYY------GLPQFG-----IELDP 87

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I LS  TAA+ +E +R+ + ++ +GQ EAA ++G+T  +A   V+LPQA R+ +P
Sbjct: 88  MPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALP 147

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + ++ L+K++SLA  +   +L      I ++T +   + L    IY  ++ +++   
Sbjct: 148 PLGNSFIGLVKDTSLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQ 207

Query: 386 NRLNAKIALKEKK 398
           +RL A +  ++++
Sbjct: 208 SRLEAHVNRQDQE 220



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G ++   RLS     + I R YV +FR  P +  +F +
Sbjct: 15  LLKGAWLTLQLSLGGMFLGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIELDPMPAALIGLSLN 98


>gi|296450403|ref|ZP_06892159.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296879474|ref|ZP_06903468.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296260664|gb|EFH07503.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296429620|gb|EFH15473.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 220

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 111/231 (48%), Gaps = 15/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + + + L    +    +T+       VFS ++G +++L     S ++  K    +  +
Sbjct: 3   FNMKYFLELFPIIMKSFNVTVILAISSLVFSLIIGTIVAL-----SSYYKVKVLNQICKV 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G P +  +   + L+F    +  F             +  I LS    A+++
Sbjct: 58  YVSIF--RGTPLMPQL---FFLYFGLAYMSDF-----VKNMDPVFATSIVLSLNMGAYMS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ ++++ +GQ+EAA A+GLT+ +  + +++PQA+R  +P L + +++L+K SS+A 
Sbjct: 108 ETIRASILSIDKGQIEAAYAMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            VG  D++    +    + +  E+    M IY  +   +     +L  KI+
Sbjct: 168 VVGVNDIMGAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGQKKLEKKIS 218



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 YKSV 152
           Y  +
Sbjct: 75  YFGL 78


>gi|298491368|ref|YP_003721545.1| polar amino acid ABC transporter inner membrane subunit ['Nostoc
           azollae' 0708]
 gi|298233286|gb|ADI64422.1| polar amino acid ABC transporter, inner membrane subunit ['Nostoc
           azollae' 0708]
          Length = 308

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 99/282 (35%), Positives = 152/282 (53%), Gaps = 8/282 (2%)

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           ++A +  +++ + RN+  L + F               ++V           L    +  
Sbjct: 27  VIAIVAILWMNLNRNLQQLGIKFGFDFLQQEASFDIGETLVNYKPTDTYILALWVGLINS 86

Query: 184 DTNAKI-FVFSFVLGI---VLSLFATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLV 236
              A    + + ++GI   + SLF   L R+    + +  +  PLL    F  FG+  + 
Sbjct: 87  LRVAIAGILLTTIVGITAGIASLFDNWLVRNISLVYVEVFRNTPLLLQLLFWYFGVFLVF 146

Query: 237 LIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                    +    L Q    + G T SPEF +L + L+ YT AFIAEIVR G+ ++P+G
Sbjct: 147 PKVENKFYVWGLIHLSQNGIELPGFTFSPEFSTLLLGLTFYTGAFIAEIVRGGIKSLPKG 206

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA ++LGL      RLV+ PQA+R IIPPLTSQYLNL KNSSLA+A+G+ D+  V  T
Sbjct: 207 QWEAGLSLGLKPTLLIRLVIFPQALRVIIPPLTSQYLNLTKNSSLAIAIGYPDIYFVAST 266

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             NQTG+A+E++++ M  YL+LS++I+L MN LN  + +KE+
Sbjct: 267 TFNQTGKAVEVMILIMLTYLTLSLIISLMMNLLNRSVQIKER 308



 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 84/180 (46%)

Query: 15  RMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQ 74
           +     D R   I+VQ I  +L+  I      N+  N+++  +  G  FL + A F+I +
Sbjct: 5   KPPIWRDYRFWRIAVQCIAVILVIAIVAILWMNLNRNLQQLGIKFGFDFLQQEASFDIGE 64

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +V Y    +Y  A+ VG +N+  +A +G++  TI+G   G   L  N LV  I  VYVE
Sbjct: 65  TLVNYKPTDTYILALWVGLINSLRVAIAGILLTTIVGITAGIASLFDNWLVRNISLVYVE 124

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           VFRN P L+ + F Y  V  V P  ++   +   + L+  G+  P  T        +   
Sbjct: 125 VFRNTPLLLQLLFWYFGVFLVFPKVENKFYVWGLIHLSQNGIELPGFTFSPEFSTLLLGL 184


>gi|138897015|ref|YP_001127468.1| amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|196249837|ref|ZP_03148533.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. G11MC16]
 gi|134268528|gb|ABO68723.1| Amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
 gi|196210713|gb|EDY05476.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. G11MC16]
          Length = 218

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +      +    +     + +   V G++L LF   L +       +     YI
Sbjct: 1   MDFRFDIIVEYAPYFWKGLLVTIGVSLAGIVFGLILGLFIG-LGKMSRHPLIRLPFTWYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F   G P +V I L   +HF    L               +SL ++LS  +AA++AEI
Sbjct: 60  NFF--RGTPLVVQILL---VHFGAMPL-------LLAEPNALVSLVVSLSLNSAAYVAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP  ++++ L+K+SSL + +
Sbjct: 108 FRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMII 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +++  G     +  +  E  L   FIYL L++ ++   + L  K + +
Sbjct: 168 AAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLILTLSLSKLSHYLERKYSTQ 218



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 76/194 (39%), Gaps = 3/194 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA     G + T  ++ +G++   I+G  +G G++S + L+      Y+  FR  P +V 
Sbjct: 11  YAPYFWKGLLVTIGVSLAGIVFGLILGLFIGLGKMSRHPLIRLPFTWYINFFRGTPLVVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  ++   + +L    +++V        N       +       I          L +  
Sbjct: 71  ILLVHFGAMPLLLAEPNALVSLVVSLSLNSAAYVAEIFRAGIQSIDKGQMEAARSLGMTH 130

Query: 205 TRLSRH--FHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGST 261
            +  R+    +   + +P       ++    +L ++IA    +++ K   G++  +    
Sbjct: 131 AQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMIIAAPEIMYWGKAAAGEYYRVWEPY 190

Query: 262 VSPEFMSLYIALSC 275
           ++  F+ L + LS 
Sbjct: 191 LTVAFIYLILTLSL 204


>gi|288961662|ref|YP_003451972.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913942|dbj|BAI75428.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 226

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF LG+++ L A  + R F      A    Y+  ++I G P LV + 
Sbjct: 17  WAALVFTVPLTLASFALGLIVGLVA-AVVRLFGPAPLAAAVRFYV--WIIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                   V   F +  I  +   +A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  LIFY-----------GLPSAGIVLDAFPAALIGFTLNVSAYTSEIIRAVIGSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++  +A R  +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWPQAMRRTILPQAARVAVPPLSNSFISLVKDTSLAAAITVPELFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + + + +    IYL LS +++    RL  ++   
Sbjct: 183 SYEPLILYVEAALIYLVLSSVLSALQVRLERRLNRY 218



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 32/84 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +    V T  L  +      I+G +    RL     +A   R YV + R  P LV +F +
Sbjct: 16  LWAALVFTVPLTLASFALGLIVGLVAAVVRLFGPAPLAAAVRFYVWIIRGTPLLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S   + D       G  LN
Sbjct: 76  FYGLPSAGIVLDAFPAALIGFTLN 99


>gi|227508252|ref|ZP_03938301.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227511259|ref|ZP_03941308.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227523474|ref|ZP_03953523.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227085510|gb|EEI20822.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227089369|gb|EEI24681.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227192481|gb|EEI72548.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 232

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 2/202 (0%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           I + SFV+G++++LF   +      K G  L L  I  F ++   +  L+   + ++F  
Sbjct: 23  IAIISFVIGLIIALFTALI--RLSSKRGAFLMLKAIFRFYVWLFRSTPLLVQLFIVYFGL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L               ++  I  S  T A+ +E +R+ ++++P GQ EAA ++G+T  
Sbjct: 81  PYLKIKGIFPNGIQLNPVIAGIITFSLNTGAYCSETIRASILSIPEGQWEAAYSIGMTKS 140

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R ++LPQA+R  +PPL + +++L+K++SLA ++   ++  V   I  Q  Q + +  
Sbjct: 141 VVLRRIILPQAIRISLPPLANSFISLVKDTSLAASITIVEMFEVSQQIAAQNYQPLIMYS 200

Query: 369 IWMFIYLSLSIMIALFMNRLNA 390
           +    Y     ++      L  
Sbjct: 201 LVAVYYAVFCTVLTWLQGYLEK 222


>gi|186476288|ref|YP_001857758.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184192747|gb|ACC70712.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 225

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   +           +     + + SF +GI L+ F   L R F      A+   Y
Sbjct: 1   MPAWLHLMGESLWPLLYAGLVFTVPLTLVSFGIGIALA-FIVALIRLFGPNWSVAIVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F   G P LV + + +                   V     +  I  S    A+ +E
Sbjct: 60  VWLF--RGSPLLVQLFVIFY-----------GLPNVGIVLDPLTAAIIGFSLNVGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P+GQ EAA ++G+T  +A R  +LPQA R  +PPL++ ++ L+K++SLA  
Sbjct: 107 VIRGVIESIPKGQWEAAYSMGMTRAQALRRAILPQAARVALPPLSNSFIALVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I + T + + +      IYL  S +++    RL  +   
Sbjct: 167 LTVPEIFQAAQRIASVTYEPLILYTEAALIYLVFSSVLSSAQVRLERRFGR 217



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 34/94 (36%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S    +  G V T  L          +  +V   RL        I R YV +FR 
Sbjct: 6   HLMGESLWPLLYAGLVFTVPLTLVSFGIGIALAFIVALIRLFGPNWSVAIVRFYVWLFRG 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P LV +F ++  + +V  + D       G  LN
Sbjct: 66  SPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLN 99


>gi|46578523|ref|YP_009331.1| glutamine ABC transporter permease [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603894|ref|YP_968294.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|46447934|gb|AAS94590.1| glutamine ABC transporter, permease protein [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120564123|gb|ABM29867.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232450|gb|ADP85304.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 223

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 12/192 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+    +   K    +YI    I G P +V +     L+F  P+             P  
Sbjct: 44  LANSGRKAAFKVPATIYIEA--IRGTPLIVQVMF---LYFGVPLATGMRI-------PPE 91

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  +A++  + A+IAEIVR  + ++  GQ EA  ++GLT  +    ++ PQA R +IPP
Sbjct: 92  TAGILAIAVNSGAYIAEIVRGAIASIDTGQSEAGRSIGLTRLQTMLYIIWPQAFRRMIPP 151

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  LK++SL V +G  +L   G  II    +A E+ L     YL++++ IA  + 
Sbjct: 152 LGNQFIISLKDTSLLVVIGVGELTRQGQEIIAVNFRAFEVWLTVAVFYLAMTLSIAWALR 211

Query: 387 RLNAKIALKEKK 398
           RL    + +  +
Sbjct: 212 RLERSFSARSAR 223


>gi|34499507|ref|NP_903722.1| amino acid ABC transporter permease [Chromobacterium violaceum ATCC
           12472]
 gi|34105357|gb|AAQ61712.1| probable amino acid ABC transporter, permease protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 220

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   M L    L              + + VLG+ L  FA  + R         L   Y+
Sbjct: 1   MGEWMALFEAALPVLLQGAAHTLLFALVAMVLGLALG-FAVAMVRVAKLPVLSQLAAFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S   + G P LV I + Y               G         +  +AL+   AA+++E 
Sbjct: 60  SA--MRGTPLLVQIFVIYY-----------GLPGVGLELDPVPAGVLALTLNVAAYLSES 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+  V +GQ +AA +LG T  +  R ++ PQA+R  +P L++  ++L+K++SL   +
Sbjct: 107 LRGGIAGVAKGQWDAAFSLGFTWWQTMRHIIAPQALRLSVPSLSNSLISLIKDTSLVSVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L+     +I QT Q + + L    IY  LS +       +  ++ L  ++
Sbjct: 167 TVTELMLATKEVIAQTFQPLPLYLAAAAIYWLLSALFERLQRHVENRLNLAHQR 220



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G  +T   A   M+    +G  V   R++   +++ +   YV   R  P LV IF 
Sbjct: 14  VLLQGAAHTLLFALVAMVLGLALGFAVAMVRVAKLPVLSQLAAFYVSAMRGTPLLVQIFV 73

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 74  IYYGLP 79


>gi|222082275|ref|YP_002541640.1| octopine ABC transporter [Agrobacterium radiobacter K84]
 gi|221726954|gb|ACM30043.1| octopine ABC transporter [Agrobacterium radiobacter K84]
          Length = 242

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 13/219 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +   S + G VL+L    ++R             Y+  F+  G P LV I L Y 
Sbjct: 19  PLTLSLAGLSILFGAVLALGL-AMARLSGITALDGFARFYV--FVFRGTPLLVQIFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  +  S + P     +    +AL+  TAA+ +EI+R GL++VP GQ+EA
Sbjct: 76  ------GLGQFPAVRHSILWPILRQPYWCAVLALTLNTAAYASEIIRGGLLSVPHGQIEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A G+      R ++ P A+R  +P   ++ ++++K +SLA  +   ++  V   +I++
Sbjct: 130 ARACGMGRFMQFRRIIWPLAIRQALPGYGNEMISMVKATSLASIITLMEVTGVAAKLISE 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T +AIE+ ++   IYL+++ ++   +  L   ++   ++
Sbjct: 190 TYRAIEVFIVAGAIYLAINFLLTRLIQLLEYWLSPHLRQ 228



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 28/68 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++     T  LA   ++   ++   +   RLS    +    R YV VFR  P LV IF +
Sbjct: 14  LISAIPLTLSLAGLSILFGAVLALGLAMARLSGITALDGFARFYVFVFRGTPLLVQIFLI 73

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 74  YYGLGQFP 81


>gi|148992490|ref|ZP_01822185.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|168484481|ref|ZP_02709433.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1873-00]
 gi|168485772|ref|ZP_02710280.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1087-00]
 gi|168489799|ref|ZP_02713998.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP195]
 gi|225856490|ref|YP_002738001.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae P1031]
 gi|147928807|gb|EDK79820.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|172042312|gb|EDT50358.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1873-00]
 gi|183571006|gb|EDT91534.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1087-00]
 gi|183571820|gb|EDT92348.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP195]
 gi|225725161|gb|ACO21013.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae P1031]
          Length = 227

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTILISICVIFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 227



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|2108227|gb|AAC45330.1| integral membrane protein-like protein [Lactobacillus reuteri]
          Length = 233

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 6/193 (3%)

Query: 199 VLSLFATRLSRHFHEK-TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            L    TRLSR        K +   Y+  F     P LV + + +   F  P L     +
Sbjct: 35  ALVTALTRLSRQRGPFMILKWIASFYVWLF--RSTPLLVQLFIVF---FGLPYLRIKGIL 89

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   F +  I  S  T A+ +E +R+ + +VPRGQ EA  A+G+T  +    ++LP
Sbjct: 90  PHGIKLEPFTAGIITFSLNTGAYASETIRAAISSVPRGQWEAGAAIGMTRLQILWRIILP 149

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R  +PPL++ +++L+K++SLA ++   ++ +V   I  +  Q + +  +   +Y   
Sbjct: 150 QALRVALPPLSNSFISLVKDTSLAASITIMEMFAVSQQIAAENYQPLLMYTLVAMVYAVF 209

Query: 378 SIMIALFMNRLNA 390
           + +++     L  
Sbjct: 210 TTVLSYLQGYLER 222


>gi|10955057|ref|NP_059713.1| hypothetical protein pTi_041 [Agrobacterium tumefaciens]
 gi|33860188|sp|P35114|OCCM_AGRTU RecName: Full=Octopine transport system permease protein occM
 gi|154764|gb|AAA50515.1| transport protein [Agrobacterium tumefaciens]
 gi|496542|emb|CAA82984.1| OccM [Agrobacterium tumefaciens]
 gi|8572696|gb|AAF77142.1| occM [Agrobacterium tumefaciens]
 gi|81176504|gb|ABB59526.1| OccM [Agrobacterium tumefaciens]
          Length = 245

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 13/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +PF      +        +    ++ VFS  LG VL+ F   L R             YI
Sbjct: 1   MPFDPAFLWQTFVALLSGIPLALQLAVFSVALGTVLA-FGLALMRVSRLWWLDLPARFYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAF 280
             F   G P LV I + Y        L QF  +  S + P     +     AL+  TAA+
Sbjct: 60  FAF--RGTPLLVQIYIIYY------GLSQFPDVRHSFIWPFLRDAYWCAMAALALNTAAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI+R GL++VP GQ+EAA A G+   K  R +++PQA+R ++P  +++ + ++K++SL
Sbjct: 112 TAEIMRGGLLSVPAGQIEAAKACGMGRVKLFRRIVIPQAIRQMLPGYSNEVILMVKSTSL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A  +   ++  +   +I+++ + +E+      IYL L+ ++A     L   +  + +
Sbjct: 172 ASTITIMEITGIAAKLISESYRTVEVFSCAGAIYLILNFIVARLFTLLEWALWPERR 228



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 77  VPYTSDSSYAT--AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           +P+     + T  A+L G      LA   +   T++   +   R+S    +    R Y+ 
Sbjct: 1   MPFDPAFLWQTFVALLSGIPLALQLAVFSVALGTVLAFGLALMRVSRLWWLDLPARFYIF 60

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            FR  P LV I+ +Y   LS  P   HS + PF      
Sbjct: 61  AFRGTPLLVQIYIIYYG-LSQFPDVRHSFIWPFLRDAYW 98


>gi|260574100|ref|ZP_05842105.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259023566|gb|EEW26857.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 266

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 19/262 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
              + +  + L      +      +   L         +T+      F  + ++G+ L+L
Sbjct: 11  FPWWLVLLAGLVCWMFYEVWASPVYAQVLATLS-KGIRITVFVTLVGFALACLIGLGLAL 69

Query: 203 FAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQ 253
            A       R +  F+ +  + +P++ +  ++ F     +++A  +    L FD      
Sbjct: 70  AAQSRFLALRQAARFYVEVVRGVPIIVLLLYVAFAATPALVLAWNWATGPLGFDPLKSRD 129

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F+               IAL+   AAF+AE+ R+GL++V +GQ+EAA ALGL   +  R 
Sbjct: 130 FSL---------LWRAVIALTLAYAAFLAEVFRAGLLSVDKGQIEAAQALGLNGWQRFRH 180

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++ PQA R+I+PPL + ++ ++K+SSL   +G AD+  +G        +  E   +   I
Sbjct: 181 IVFPQAFRTILPPLGNDFVAMVKDSSLVSVLGVADVTQLGKVTSAGNFRYFETYNVVALI 240

Query: 374 YLSLSIMIALFMNRLNAKIALK 395
           YL++++ ++L + +L A++  +
Sbjct: 241 YLTMTVTLSLGLRKLEARLRQR 262



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 38/110 (34%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T ++   G   A +IG  +     S    +    R YVEV R +P +V++ ++  +
Sbjct: 45  GIRITVFVTLVGFALACLIGLGLALAAQSRFLALRQAARFYVEVVRGVPIIVLLLYVAFA 104

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
               L +  +    P G                    +   +F+  +  +
Sbjct: 105 ATPALVLAWNWATGPLGFDPLKSRDFSLLWRAVIALTLAYAAFLAEVFRA 154


>gi|325519635|gb|EGC98978.1| hypothetical protein B1M_38906 [Burkholderia sp. TJI49]
          Length = 220

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 14/233 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + L  + L           ++ + + V G+V+ L A  L R    +  +     YI 
Sbjct: 1   MFDIHLVLKYLPMLFEAAGVTVQLTLLATVAGLVIGLAA-ALGRLSRHRVLRDAMGAYI- 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            +LI   P LV + + Y           F           F S  I L+    A+ AE +
Sbjct: 59  -WLIRSTPLLVQLFIIY-----------FGLPQFGIELSPFTSGVIGLALNVGAYNAETI 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G++A+P GQ+EA+ +LG    +  RLV+LPQA++ I+PPL +  + L K++SL   + 
Sbjct: 107 RAGILAIPHGQIEASRSLGFGAARTMRLVVLPQALKLIVPPLGNNLIILTKDTSLVSTIT 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            A+L      ++  T +  E+      IY  L+   ++ + +   ++ LK  +
Sbjct: 167 LAELFMRTQQLVGATFKPFELYFACAMIYALLTTGTSVLLRQFEQRLILKGGR 219



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 33/88 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +      T  L     +   +IG     GRLS ++++      Y+ + R+ P LV 
Sbjct: 10  YLPMLFEAAGVTVQLTLLATVAGLVIGLAAALGRLSRHRVLRDAMGAYIWLIRSTPLLVQ 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +F +Y  +               G+ LN
Sbjct: 70  LFIIYFGLPQFGIELSPFTSGVIGLALN 97


>gi|229047847|ref|ZP_04193426.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH676]
 gi|229111627|ref|ZP_04241178.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock1-15]
 gi|229146727|ref|ZP_04275093.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST24]
 gi|228636747|gb|EEK93211.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST24]
 gi|228672009|gb|EEL27302.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock1-15]
 gi|228723508|gb|EEL74874.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH676]
          Length = 225

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 19  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGVPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 225



 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +      Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADFYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQI 87


>gi|170698704|ref|ZP_02889770.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170136408|gb|EDT04670.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 259

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 15/216 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHF----HEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
               VF  +  ++L++   R S                L      L+ G P LV I + Y
Sbjct: 55  VLSMVFGLLGAVMLAMMGIRQSERLEGFERIWVNALAWLARAYVSLMRGTPLLVQIFVIY 114

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA +
Sbjct: 115 ---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAAYS 163

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T Q
Sbjct: 164 LGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAATYQ 223

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + + L    +Y  L  ++         +++L  + 
Sbjct: 224 PLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPARH 259


>gi|111657768|ref|ZP_01408489.1| hypothetical protein SpneT_02001056 [Streptococcus pneumoniae
           TIGR4]
 gi|148990332|ref|ZP_01821518.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|148997101|ref|ZP_01824755.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149010549|ref|ZP_01831920.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|168490915|ref|ZP_02715058.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC0288-04]
 gi|168492978|ref|ZP_02717121.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC3059-06]
 gi|168575482|ref|ZP_02721418.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|169833263|ref|YP_001694278.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|194396808|ref|YP_002037460.1| amino acid ABC transporter permease [Streptococcus pneumoniae G54]
 gi|225858625|ref|YP_002740135.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 70585]
 gi|237650814|ref|ZP_04525066.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CCRI 1974]
 gi|237821580|ref|ZP_04597425.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|303260286|ref|ZP_07346257.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303261492|ref|ZP_07347440.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264160|ref|ZP_07350081.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303267026|ref|ZP_07352898.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303269212|ref|ZP_07354989.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|307067421|ref|YP_003876387.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|147756801|gb|EDK63841.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147765030|gb|EDK71959.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147924361|gb|EDK75452.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|168995765|gb|ACA36377.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|183574731|gb|EDT95259.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC0288-04]
 gi|183577004|gb|EDT97532.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC3059-06]
 gi|183578509|gb|EDT99037.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|194356475|gb|ACF54923.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae G54]
 gi|225721724|gb|ACO17578.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 70585]
 gi|301801656|emb|CBW34356.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae INV200]
 gi|302637626|gb|EFL68113.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638610|gb|EFL69074.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302641276|gb|EFL71646.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302643420|gb|EFL73695.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646565|gb|EFL76791.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|306408958|gb|ADM84385.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|327390176|gb|EGE88519.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
 gi|332077236|gb|EGI87698.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 227

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTILISICVIFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 227



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|327189448|gb|EGE56610.1| glutamine ABC transporter ATP-binding protein [Rhizobium etli
           CNPAF512]
          Length = 507

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 22/218 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   V+G+VL++     SR              + T +  GLP +V I +  Q 
Sbjct: 37  LAAASTVLGVVIGMVLAVMGISQSRWLRLPA-------RVYTDIFRGLPAIVTILIIGQ- 88

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  F    +ALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 89  --------GFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRAL 140

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            +++ +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 141 SMSYGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 200

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG  +  +L+    YL +++ +  F+N ++A++ L ++
Sbjct: 201 TGN-LSPLLLAGVFYLVITVPLTHFVNYIDARLRLGKQ 237



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 19/124 (15%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N  +N+ +        FL   A  ++   ++             VG  NT  LA +  + 
Sbjct: 4   NWIDNLRR-------SFLDWDAMVDVLPSMIS------------VGLKNTLILAAASTVL 44

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
             +IG ++    +S ++ +    RVY ++FR +P +V I  + +    +          P
Sbjct: 45  GVVIGMVLAVMGISQSRWLRLPARVYTDIFRGLPAIVTILIIGQGFARIGREIFGPSPFP 104

Query: 167 FGMF 170
            G+ 
Sbjct: 105 LGIL 108


>gi|258406274|ref|YP_003199016.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798501|gb|ACV69438.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 233

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 75/236 (31%), Positives = 113/236 (47%), Gaps = 9/236 (3%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                   L          +     T+  +A   V S V+G ++++F     R    K  
Sbjct: 1   MNYQFDWKLVVSGEYGEWIIQGLITTLQISAVSIVLSLVVGTIIAVF-----RLSKVKPL 55

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +   L Y   F     P L+ I   Y       VL QF        + EF +  IAL+ Y
Sbjct: 56  EWFSLAYTEFF--RNTPLLIQIFFWYFGS--NSVLPQFVNEWLYEQNFEFAAGVIALTVY 111

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+AFIAE +RSG+ ++P+ Q+E+A A GLT  ++ R ++LPQA R IIPPL SQ+LNL K
Sbjct: 112 TSAFIAEEIRSGIFSIPKTQLESARASGLTFIQSMRFIILPQAYRIIIPPLISQFLNLTK 171

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NSSL + +G  DL  +   I + T    E   +   +Y+ +S++I+  +   N   
Sbjct: 172 NSSLVMTIGVMDLTYMARQIESYTFHGFEAFTVATVLYICISLVISFVVTMYNKHF 227



 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 41/84 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   I+ G + T  ++   ++ + ++GT++   RLS  K + W    Y E FRN P 
Sbjct: 12  SGEYGEWIIQGLITTLQISAVSIVLSLVVGTIIAVFRLSKVKPLEWFSLAYTEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVL 165
           L+ IFF Y    SVLP   +  + 
Sbjct: 72  LIQIFFWYFGSNSVLPQFVNEWLY 95


>gi|170724087|ref|YP_001751775.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169762090|gb|ACA75406.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 229

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 110/224 (49%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + V G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVVAGLILAIPLG-IARSSRHWYVRALPFSYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  L 
Sbjct: 66  LVQLFLVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+G++EAA ALG++  K    ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 120 SIPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T   +EI       YL +S ++      L   + +
Sbjct: 180 GMARTIIARTYLPVEIFFAAGVFYLVISFLLVQGFKLLERWLRV 223



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    ++   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVVAGLILAIPLGIARSSRHWYVRALPFSYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 69  LFLVYYGLAQFD 80


>gi|237667355|ref|ZP_04527339.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237655703|gb|EEP53259.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 254

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 100/248 (40%), Gaps = 19/248 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-- 209
           + S LP      V+          +     T+       V   ++G ++ +      +  
Sbjct: 1   MTSNLPDDFFGWVVFLIQKYGELFIKGAAYTLILALIGTVIGCIIGFLVGIVRKIEVQED 60

Query: 210 -----HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
                 +  K  + +   Y+  F   G P +V   + Y    +            +    
Sbjct: 61  CNKFYKYTLKLSQIILTGYVEFF--RGTPMIVQAMVIYYGAMEA----------FNIDMA 108

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +    +S  T A++AE VR G+ ++  GQ E A A+G+TH +    V+LPQ +R+I+
Sbjct: 109 PFTAGLFVVSINTGAYMAETVRGGIESIDMGQTEGAKAIGMTHFQTMLYVILPQTLRNIM 168

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + +  +  +K++S+   +  ++L  VG +      +   +  I   IY  ++ +++  
Sbjct: 169 PQIGNNLIINIKDTSVLNVISVSELYFVGKSAAGVYYKYFPVFFIICVIYFVMNFVVSRI 228

Query: 385 MNRLNAKI 392
           +  +  K+
Sbjct: 229 LRLIEKKM 236



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 12/84 (14%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR------------LSANKLVAWICRVY 132
           Y    + G   T  LA  G +   IIG LVG  R                KL   I   Y
Sbjct: 20  YGELFIKGAAYTLILALIGTVIGCIIGFLVGIVRKIEVQEDCNKFYKYTLKLSQIILTGY 79

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           VE FR  P +V    +Y   +   
Sbjct: 80  VEFFRGTPMIVQAMVIYYGAMEAF 103


>gi|157693148|ref|YP_001487610.1| glutamine ABC transporter membrane protein [Bacillus pumilus
           SAFR-032]
 gi|157681906|gb|ABV63050.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 217

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 18/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + SF++G ++++      R          PL ++ T  +  +  + L+ + +   F
Sbjct: 26  VIALIGSFLIGTLIAIMRIAPLR----------PLNWLGTAYVEFIRNIPLLLITFVFFF 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PVL          V+  F +  IAL+ YT+AFIAE VR+G+ AVP GQMEAA A GL+
Sbjct: 76  GLPVL--------GIVADGFTAGTIALAIYTSAFIAEAVRAGIQAVPLGQMEAARASGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +    R ++LPQA++ +IPPL +Q++NL+KNSS+   +   DL+  G  I ++T    ++
Sbjct: 128 YGGTMRYIILPQAIKIVIPPLGNQFINLVKNSSILGVIAGFDLMYQGDLIASRTFVTFDV 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL L+I ++L +  L  ++A   
Sbjct: 188 YIFVAMFYLILTIPLSLGVGYLEKRLARSH 217



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T   +   +I + +IGTL+   R++  + + W+   YVE  RNIP L++ F  +  
Sbjct: 17  GFKYTIGASVIALIGSFLIGTLIAIMRIAPLRPLNWLGTAYVEFIRNIPLLLITFVFFFG 76

Query: 152 VL 153
           + 
Sbjct: 77  LP 78


>gi|51245412|ref|YP_065296.1| amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50876449|emb|CAG36289.1| probable amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 221

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 15/214 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              AK+  FSF+L ++  L        +  ++   L   Y+  F   G P L+ +   Y 
Sbjct: 21  WATAKVVFFSFILAMLFGLIVG--VARYRSRSLYLLFSPYVEFF--RGTPLLIQLFFIYY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F +  + L     A+I+EI+R  L++V + Q+EA+ AL
Sbjct: 77  -----------GLPTIGISMDSFTAACLGLGLNGGAYISEIIRGSLLSVDQDQLEASYAL 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  ++   V+ PQA    IPPL + + +LLK++SL   +   +L  VG  I  +T +A
Sbjct: 126 GLTWFQSMVYVIFPQAFTVAIPPLVNSFSSLLKDTSLVSVLAITELTRVGQLIYTRTFRA 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            EI L    +Y  ++ ++ L    L  K  ++ +
Sbjct: 186 FEIYLAIGMLYFMMTFVMTLLSKYLEKKYKVQGR 219



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  + F   I A + G +VG  R   ++ +  +   YVE FR  P L+ +FF+
Sbjct: 16  LCQGVWATAKVVFFSFILAMLFGLIVGVAR-YRSRSLYLLFSPYVEFFRGTPLLIQLFFI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  + ++    D       G+ LN
Sbjct: 75  YYGLPTIGISMDSFTAACLGLGLN 98


>gi|323697578|ref|ZP_08109490.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457510|gb|EGB13375.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 587

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 17/251 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ F +  + + L                  GL     ++   A     SF +G+V+   
Sbjct: 345 LVHFNWAIIGANLKTLLIWRFPNGDETEFCYGLGGLAGSLLMAAISITGSFFIGLVVG-- 402

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              + R  H +  +   LLYI       L  ++L   +  L F   V  Q          
Sbjct: 403 ---MGRTAHNRVFRIPCLLYIELIRGVPLILVILWFYQAILEFVFKVDVQ---------- 449

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F +  IA++ +  A+IAE VR G+  +P GQ+EAA A GLT+ +  R ++LPQA++ +
Sbjct: 450 -AFWAATIAMTFFFGAYIAETVRGGIENIPPGQVEAAKASGLTYLQTMRKIVLPQALKQM 508

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P L   ++   K++SLA  +G  +L      I N+      EI      +Y   S  ++
Sbjct: 509 LPALVGMFIAAFKDTSLAYIIGVMELTRAAYAINNRIMVYPFEIYTTVAVLYFVFSYFMS 568

Query: 383 LFMNRLNAKIA 393
           L+  RL  K++
Sbjct: 569 LYAKRLERKLS 579



 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 7/250 (2%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y          D    +                 ++T   I V+S  + +V+      L+
Sbjct: 25  YYFAFIFEFKYDFDWAVFAVEGQYGHMGHLMLNGINTTLTITVYSAAIALVMGTVFG-LA 83

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R    K        Y+  F     P L+ +    + L +  P   +        ++ EF 
Sbjct: 84  RLSSFKPVYWFSTCYVELF--RNTPLLIQLFFWNFALPYAFPEELRLKLF---DMNFEFW 138

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              +    +T AF+AEI+R+G+ ++P+G +EAA + GLT  +  R V+LP A R IIPPL
Sbjct: 139 CATVGCGIFTGAFMAEIIRAGIQSIPKGLLEAAYSSGLTFPQTLRKVILPLAFREIIPPL 198

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            S++LN +KN+SLA+ +G  +L      + + T +  E   +   +YL LS+ IA  +  
Sbjct: 199 GSEFLNNMKNTSLAMTIGVTELCWSMTEVYSLTYRTFEAFSVATVVYLGLSLSIAGILYI 258

Query: 388 LNAKIALKEK 397
           +N ++ +  +
Sbjct: 259 VNERLKIMPR 268



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 2/131 (1%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSY-ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119
             F+ E   ++ D  +        +    +L G   T  +       A ++GT+ G  RL
Sbjct: 27  FAFIFE-FKYDFDWAVFAVEGQYGHMGHLMLNGINTTLTITVYSAAIALVMGTVFGLARL 85

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           S+ K V W    YVE+FRN P L+ +FF   ++    P      +           +   
Sbjct: 86  SSFKPVYWFSTCYVELFRNTPLLIQLFFWNFALPYAFPEELRLKLFDMNFEFWCATVGCG 145

Query: 180 TLTMDTNAKIF 190
             T    A+I 
Sbjct: 146 IFTGAFMAEII 156



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 3/185 (1%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A   +  +  IG +VG GR + N++    C +Y+E+ R +P ++VI + Y+++L  +  
Sbjct: 386 MAAISITGSFFIGLVVGMGRTAHNRVFRIPCLLYIELIRGVPLILVILWFYQAILEFVFK 445

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI---VLSLFATRLSRHFHEKT 215
            D        + +     ++   T+    +      V       L+   T       +  
Sbjct: 446 VDVQAFWAATIAMTFFFGAYIAETVRGGIENIPPGQVEAAKASGLTYLQTMRKIVLPQAL 505

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            + LP L       F   +L  I    +L      +     +    +      LY   S 
Sbjct: 506 KQMLPALVGMFIAAFKDTSLAYIIGVMELTRAAYAINNRIMVYPFEIYTTVAVLYFVFSY 565

Query: 276 YTAAF 280
           + + +
Sbjct: 566 FMSLY 570


>gi|296272082|ref|YP_003654713.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096257|gb|ADG92207.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 224

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 104/227 (45%), Gaps = 13/227 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +             +D    + +   V+ + +++    + + +  K       LYIS 
Sbjct: 4   FDVDYALGIFPILFKYIDITVSMALIGTVIALFIAILI-AIMKTYKVKVISQFCDLYISF 62

Query: 227 FLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             + G P LV + L Y  L    PV    +          + +    LS + +A++AE +
Sbjct: 63  --LRGTPLLVQLFLLYYGLPQIFPVFANLD---------SYSASIAGLSLHFSAYMAESI 111

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + ++ +GQ EA+ +LGL++ +    ++LPQA+R  +P L + +++L+K++SLA  +G
Sbjct: 112 RGAISSIDKGQFEASSSLGLSNTQTFIYIILPQAIRVAVPSLMNNFIDLIKSTSLAFTLG 171

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++++      + + +  E  L    +Y  + ++      +L  K+
Sbjct: 172 VPEIMAKAQLEASSSYKYFESFLAVALVYWVIVLVFTYIQKKLEKKL 218



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A  G + A  I  L+   +    K+++  C +Y+   R  P LV +F LY  +  +
Sbjct: 23  TVSMALIGTVIALFIAILIAIMKTYKVKVISQFCDLYISFLRGTPLLVQLFLLYYGLPQI 82

Query: 156 LPIPDHSIVL 165
            P+  +    
Sbjct: 83  FPVFANLDSY 92


>gi|255283434|ref|ZP_05347989.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Bryantella formatexigens DSM 14469]
 gi|255266082|gb|EET59287.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Bryantella formatexigens DSM 14469]
          Length = 267

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 19/248 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR----- 206
           + S +P      +L          L    +TM       +   ++G  + +  T      
Sbjct: 1   MTSSIPADFFGRILFLLERYGASFLRGAGVTMAIALVGTLIGCIIGFAVGVVQTIPVSKR 60

Query: 207 --LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             L +    K  K +   Y+  F   G P +V     Y        +             
Sbjct: 61  DGLPKRIFLKAVKVILSAYVELF--RGTPMMVQAMFIYYGSQSLFKIN----------MS 108

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            + + Y  +S  T A++AE VR G++++  GQ E A A+G+TH +    V+LPQA+R+I+
Sbjct: 109 MWFAAYFIVSINTGAYMAETVRGGILSIDPGQTEGAKAIGMTHFQTMTSVILPQALRNIM 168

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + +  +  +K++ +   +G  +L     ++        E   I M IY  L+   +  
Sbjct: 169 PQIGNNLIINIKDTCVLSIIGTVELFFAAKSVAGTFYTYFEAFTIAMVIYFVLTFTCSRI 228

Query: 385 MNRLNAKI 392
           +     K+
Sbjct: 229 LRWAEHKM 236



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 38/119 (31%), Gaps = 12/119 (10%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICR 130
             Y  + L G   T  +A  G +   IIG  VG  +                K V  I  
Sbjct: 18  ERYGASFLRGAGVTMAIALVGTLIGCIIGFAVGVVQTIPVSKRDGLPKRIFLKAVKVILS 77

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            YVE+FR  P +V   F+Y    S+  I        + +   N G             I
Sbjct: 78  AYVELFRGTPMMVQAMFIYYGSQSLFKINMSMWFAAYFIVSINTGAYMAETVRGGILSI 136


>gi|118476327|ref|YP_893478.1| glutamine ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|118415552|gb|ABK83971.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Bacillus thuringiensis str. Al Hakam]
          Length = 218

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG+VL++      R           L ++ T  +  + 
Sbjct: 13  MYLEGFKYTVVSSVIALIGSFILGVVLAIMRIAPIRI----------LNWLGTAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVVSSVIALIGSFILGVVLAIMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|329113273|ref|ZP_08242056.1| Inner membrane amino-acid ABC transporter permease protein YecS
           [Acetobacter pomorum DM001]
 gi|326697414|gb|EGE49072.1| Inner membrane amino-acid ABC transporter permease protein YecS
           [Acetobacter pomorum DM001]
          Length = 519

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +     + L   Y+   ++ G P L+ +   +   +  P         G +++P F++
Sbjct: 341 RLYGPTPLRWLATTYVE--VVRGTPLLIQVLFIF---YGLPEF-------GISLTP-FLA 387

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             ++L    AA+ AE  R+GL +V  GQMEAA+AL +TH +A R V++PQA R ++P +T
Sbjct: 388 GVVSLGMNYAAYEAENYRAGLQSVAHGQMEAALALNMTHAQALRYVVVPQAFRLVMPVMT 447

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++LLK+SSL   +   +L      + +         L+    YL L +         
Sbjct: 448 NDFISLLKDSSLVSVITLTELTQTYIRLSSSYFDYFGTGLMVGAAYLLLGLPFVRLARMA 507

Query: 389 NAKIALKEKK 398
             K+A    +
Sbjct: 508 EKKLAQPHMR 517



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 8/193 (4%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++   M+ A   G  +   RL     + W+   YVEV R  P L+ + F++  +   
Sbjct: 319 TLLVSLCAMVLAVGAGLALALLRLYGPTPLRWLATTYVEVVRGTPLLIQVLFIFYGLPEF 378

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
                  +     + +N              +   V    +   L+L  T      +   
Sbjct: 379 GISLTPFLAGVVSLGMNYAAYEAENYRAGLQS---VAHGQMEAALALNMTHAQALRYVVV 435

Query: 216 GKAL----PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG-GSTVSPEFMSLY 270
            +A     P++      +    +LV +    +L      L    F   G+ +      L 
Sbjct: 436 PQAFRLVMPVMTNDFISLLKDSSLVSVITLTELTQTYIRLSSSYFDYFGTGLMVGAAYLL 495

Query: 271 IALSCYTAAFIAE 283
           + L     A +AE
Sbjct: 496 LGLPFVRLARMAE 508


>gi|41406150|ref|NP_958986.1| hypothetical protein MAP0052c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394498|gb|AAS02369.1| GlnQ [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 579

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 20/216 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V   VLG+VL++     +   H +  +    +Y   F   GLP +V        
Sbjct: 361 LTFSASVIGLVLGMVLAV-----AGISHARWLRWPARVYTDVF--RGLPEVV-------- 405

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 LG    +GG T +  +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG
Sbjct: 406 IILLIGLGIGPIVGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALG 465

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQT 360
            ++  A RLV++PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  +T
Sbjct: 466 FSYATAMRLVVVPQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAET 525

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  +  ++     YL L++ +   +N ++A++    
Sbjct: 526 GN-LSPLVAAGACYLILTVPLTHLVNMIDARLRRGR 560



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 12/151 (7%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  L FS  +   ++G ++    +S  + + W  RVY +VFR +P +V+I  +   
Sbjct: 354 GLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVVIILLIGLG 413

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRG------------LSFPTLTMDTNAKIFVFSFVLGIV 199
           +  ++    ++   P G+                  +          ++   FS+   + 
Sbjct: 414 IGPIVGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMR 473

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           L +    + R       + + LL  S  + F
Sbjct: 474 LVVVPQGVRRVLPALVNQFIALLKASALVYF 504


>gi|145638107|ref|ZP_01793717.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittII]
 gi|145272436|gb|EDK12343.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittII]
 gi|309751273|gb|ADO81257.1| L-cystine ABC transporter, permease component TcyB [Haemophilus
           influenzae R2866]
          Length = 238

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP                   +    T+      F    ++ +++++  T
Sbjct: 1   MILLNNWLASLPFMSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             S +   K  +AL  +YIS  +I G P LV I + +   +  P +       G T+ P 
Sbjct: 61  FPSPNLPLKLLQALCRVYIS--IIRGTPMLVQIFIIF---YGLPEV-------GITLEP- 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+A    ++PQA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQAFIRTIMPQALRISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +++ +K++SLA  V   +L  V   I     + I I      IY     +++   
Sbjct: 168 SLSNTFISTVKDTSLASLVLVTELFRVAQNITAANYEFILIYSEAALIYWIFCFVLSFLQ 227

Query: 386 NRLNAKIAL 394
           +RL  +++ 
Sbjct: 228 DRLEIRLSR 236



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFR 137
           SS+   +    + T  LA        +I  +V   R   +      L+  +CRVY+ + R
Sbjct: 24  SSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTFPSPNLPLKLLQALCRVYISIIR 83

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             P LV IF ++  +  V    +          +N    +  T+     A 
Sbjct: 84  GTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAI 134


>gi|309378707|emb|CBX22657.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 248

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 21/251 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE----------- 213
           + F   +             T   + V +   G VL LF   L+R  H            
Sbjct: 1   MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLFL-ALARLIHLEKAGAPMRALA 59

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + + LLY++ F   G P  V I +   + F   V             I         
Sbjct: 60  WALRKVSLLYVTLF--RGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLEKRYNPQHR 248



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 11/94 (11%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----------NKLVAW 127
           +     Y    L G + T  L        +++G  +   RL                +  
Sbjct: 5   FDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLFLALARLIHLEKAGAPMRALAWALRK 64

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
           +  +YV +FR  P  V I             P  
Sbjct: 65  VSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSD 98


>gi|228916790|ref|ZP_04080355.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228929200|ref|ZP_04092227.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228935473|ref|ZP_04098291.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|229093213|ref|ZP_04224331.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-42]
 gi|229123673|ref|ZP_04252868.1| Arginine transport system permease protein artQ [Bacillus cereus
           95/8201]
 gi|229157734|ref|ZP_04285809.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 4342]
 gi|229186397|ref|ZP_04313561.1| Arginine transport system permease protein artQ [Bacillus cereus
           BGSC 6E1]
 gi|228597024|gb|EEK54680.1| Arginine transport system permease protein artQ [Bacillus cereus
           BGSC 6E1]
 gi|228625691|gb|EEK82443.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 4342]
 gi|228659808|gb|EEL15453.1| Arginine transport system permease protein artQ [Bacillus cereus
           95/8201]
 gi|228690187|gb|EEL43981.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock3-42]
 gi|228824225|gb|EEM70039.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228830490|gb|EEM76100.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228842977|gb|EEM88060.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 222

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 16  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DLYTSIFRGT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 69  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 119 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 179 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 222



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +     +Y  +F
Sbjct: 6   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADLYTSIF 65

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 66  RGTPLVLQLMIIYFGVPQI 84


>gi|261339173|ref|ZP_05967031.1| hypothetical protein ENTCAN_05397 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319018|gb|EFC57956.1| arginine ABC transporter, permease protein ArtQ [Enterobacter
           cancerogenus ATCC 35316]
          Length = 238

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 108/225 (48%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+VL++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIIGLVLAMFFAVWESAKWRPVAWAGSALVTVLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   +A+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFNINLGFAQIPVQMQIENFDVSP-FLCGVIALSLLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 QGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|323339542|ref|ZP_08079817.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus ruminis ATCC 25644]
 gi|323093022|gb|EFZ35619.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus ruminis ATCC 25644]
          Length = 229

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 5/209 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I +    +GI+L L    + R    K    L   Y+S  ++ G P ++ + L Y    
Sbjct: 20  VIISLIGVAIGILLGLIVVSM-RMSDFKVLSWLARCYVS--IVRGTPAMIQVMLIYYSLS 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L   + +G S      +   IAL   + A+ AEI RSG+I+VP+GQ EA ++LGL 
Sbjct: 77  KLLELPDVSILGSSI--ARIIPGSIALGINSGAYTAEIFRSGIISVPKGQTEAGLSLGLD 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                  ++LPQA+R+++P L +++++L+K SS+   +G  DL +    I       +  
Sbjct: 135 ELTTMTSIVLPQAVRNVLPALCNEFISLIKESSVLFYIGVQDLTAQALGIGGTLYDFVPP 194

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++   IY  L+ +++  ++ L  K+  K
Sbjct: 195 LIVAAIIYFILTFLLSQSVSVLEKKMGKK 223



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 42/82 (51%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   S Y      G   T  ++  G+    ++G +V + R+S  K+++W+ R YV + R 
Sbjct: 2   FDFLSKYYPLFFCGTAQTVIISLIGVAIGILLGLIVVSMRMSDFKVLSWLARCYVSIVRG 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPD 160
            P ++ +  +Y S+  +L +PD
Sbjct: 62  TPAMIQVMLIYYSLSKLLELPD 83


>gi|116249396|ref|YP_765237.1| putative ATP-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254046|emb|CAK12443.1| putative ATP-binding component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 511

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 22/218 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   ++G+ L++     SR              I T +  GLP +V I +  Q 
Sbjct: 35  LAAASTVLGVIIGMALAVMGISQSRWLRLPA-------RIYTDIFRGLPAIVTILIIGQ- 86

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  F    +ALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 87  --------GFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            ++H +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 139 SMSHGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG  +  +L+    YL +++ +  F+N ++A++ L ++
Sbjct: 199 TGN-LSPLLLAGVFYLVITVPLTHFVNYIDARLRLGKQ 235



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 35/80 (43%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG  NT  LA +  +   IIG  +    +S ++ +    R+Y ++FR +P +V I  + +
Sbjct: 27  VGLKNTLILAAASTVLGVIIGMALAVMGISQSRWLRLPARIYTDIFRGLPAIVTILIIGQ 86

Query: 151 SVLSVLPIPDHSIVLPFGMF 170
               +          P G+ 
Sbjct: 87  GFARIGREIFGPSPFPLGIL 106


>gi|15900711|ref|NP_345315.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|182683734|ref|YP_001835481.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|14972296|gb|AAK74955.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|182629068|gb|ACB90016.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
          Length = 229

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 9   PKYLPYFNYGAVVTILISICVIFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 66  PMMVQIMIAFALMHINAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAV 123

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 124 PKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNG 183

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 184 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 229



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 11  YLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 70

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 71  IMIAFALMHINAPTIQ 86


>gi|190894778|ref|YP_001985071.1| glutamine ABC transporter ATP-binding protein [Rhizobium etli CIAT
           652]
 gi|190700439|gb|ACE94521.1| glutamine ABC transporter, ATP-binding protein [Rhizobium etli CIAT
           652]
          Length = 505

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 22/218 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   V+G+VL++     SR              + T +  GLP +V I +  Q 
Sbjct: 35  LAAASTVLGVVIGMVLAVMGISQSRWLRLPA-------RVYTDIFRGLPAIVTILIIGQ- 86

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  F    +ALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 87  --------GFARIGREIFGPSPFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            +++ +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 139 SMSYGQGMRLIVIPQGIRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           TG  +  +L+    YL +++ +  F+N ++A++ L ++
Sbjct: 199 TGN-LSPLLLAGVFYLVITVPLTHFVNYIDARLRLGKQ 235



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 19/124 (15%)

Query: 47  NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
           N  +N+ +        FL   A  ++   ++             VG  NT  LA +  + 
Sbjct: 2   NWIDNLRR-------SFLDWDAMVDVLPSMIS------------VGLKNTLILAAASTVL 42

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
             +IG ++    +S ++ +    RVY ++FR +P +V I  + +    +          P
Sbjct: 43  GVVIGMVLAVMGISQSRWLRLPARVYTDIFRGLPAIVTILIIGQGFARIGREIFGPSPFP 102

Query: 167 FGMF 170
            G+ 
Sbjct: 103 LGIL 106


>gi|331270072|ref|YP_004396564.1| amino acid ABC transporter permease [Clostridium botulinum
           BKT015925]
 gi|329126622|gb|AEB76567.1| amino acid ABC transporter, permease component [Clostridium
           botulinum BKT015925]
          Length = 215

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 103/209 (49%), Gaps = 14/209 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V   +LG ++ +    L +    K    +   Y   F   G P  + +   Y    
Sbjct: 21  IQLTVICVILGSIIGIIVAGL-KLSKHKWVLYIASFYTWLF--RGTPMFLQLFFFYY--- 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                    F+G S       +  I LS  + A+++EI+R G+I++ +GQ EA  +LG T
Sbjct: 75  ------GLPFLGISL--TPMAAAIIGLSLNSGAYMSEIIRGGIISIDKGQFEACKSLGFT 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A   V+LPQ  R I+P + ++++ +LK++SL  A+   +L+      ++ +G+ +E 
Sbjct: 127 NLQAMTRVILPQTFRIILPSVGNEFITMLKDTSLVSAITMEELMRNAELQMSASGRPVEP 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +I   +YL ++ + ++  + L  K+++ 
Sbjct: 187 FIIAAVLYLLMTTVFSVIFSLLEKKMSMY 215


>gi|229015747|ref|ZP_04172728.1| Amino acid ABC transproter, permease [Bacillus cereus AH1273]
 gi|229021947|ref|ZP_04178508.1| Amino acid ABC transproter, permease [Bacillus cereus AH1272]
 gi|228739362|gb|EEL89797.1| Amino acid ABC transproter, permease [Bacillus cereus AH1272]
 gi|228745552|gb|EEL95573.1| Amino acid ABC transproter, permease [Bacillus cereus AH1273]
          Length = 230

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL+L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|226200044|ref|ZP_03795593.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|225927896|gb|EEH23934.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei Pakistan 9]
          Length = 582

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 11/247 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +    FL+   LS    T+   A   +F F LG+ L+L     +R        
Sbjct: 4   NPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLAL-----ARVSRSPLLV 58

Query: 218 ALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYI 271
           A    +I  F    L  L+LI      L   +    P     F  +  + +   F +  +
Sbjct: 59  ACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFAEVATTDLISPFCAAVL 118

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAMR+ +P   +  
Sbjct: 119 GLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAMRAFLPVAFNDL 178

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L K SS+   +   +L      I  +  + I ++++    YL +  ++++   ++  +
Sbjct: 179 IALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSIVQAQVERR 238

Query: 392 IALKEKK 398
            A    +
Sbjct: 239 YARGAVR 245


>gi|148926135|ref|ZP_01809821.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145845614|gb|EDK22706.1| putative glutamine transport system permease [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 261

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L   YI   LI G P LV + L Y +  
Sbjct: 68  LVISFFSLLLSIILGGIFCAFS-LSSIVFLRFLSTFYIE--LIRGTPLLVQVLLIYYIIA 124

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 125 NNLGLDN-----------RYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLK 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 174 EMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 233

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I++F   L  K
Sbjct: 234 YVILAITYLVLTLPISIFSRYLERK 258



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 44/87 (50%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 40  SFSISAYHFDFSAIATYKEKFLQGFLNTLVISFFSLLLSIILGGIFCAFSLSSIVFLRFL 99

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 100 STFYIELIRGTPLLVQVLLIYYIIANN 126


>gi|228954439|ref|ZP_04116464.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228974247|ref|ZP_04134817.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228980838|ref|ZP_04141143.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis Bt407]
 gi|229180433|ref|ZP_04307776.1| Arginine transport system permease protein artQ [Bacillus cereus
           172560W]
 gi|228603180|gb|EEK60658.1| Arginine transport system permease protein artQ [Bacillus cereus
           172560W]
 gi|228779007|gb|EEM27269.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis Bt407]
 gi|228785587|gb|EEM33596.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228805096|gb|EEM51690.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 225

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 19  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 225



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +      Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADFYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQI 87


>gi|299536214|ref|ZP_07049527.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298728200|gb|EFI68762.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 236

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +   +K       LYI  F   G P LV I L +             ++         +S
Sbjct: 47  KLSSKKWIYWPSKLYIDLF--RGTPMLVQILLIHLAVIPTIFGHSLGYM---------VS 95

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL    AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL 
Sbjct: 96  GITALILNCAAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLG 155

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ LLK+SSL   +   D++     +   + +  E  ++   +YL L+  +   +  +
Sbjct: 156 NEFIALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYIVAALLYLVLTYGVTKIVAFI 215

Query: 389 NAKIA 393
             + +
Sbjct: 216 EKRFS 220



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 39/75 (52%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    +Y    + G   T  L  SG     ++G  +G G+LS+ K + W  ++Y+++FR 
Sbjct: 8   WDIVWNYRDMFIRGIGVTLILTLSGYFGGILLGLFLGLGKLSSKKWIYWPSKLYIDLFRG 67

Query: 139 IPPLVVIFFLYKSVL 153
            P LV I  ++ +V+
Sbjct: 68  TPMLVQILLIHLAVI 82


>gi|152977983|ref|YP_001343612.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
 gi|150839706|gb|ABR73677.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 238

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 13/216 (6%)

Query: 185 TNAKIFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
            +  + + SF++G+++++     R++          L L+ I   +I G P LV I++ +
Sbjct: 34  VSIPLAIASFIIGMIIAVGVALIRITPVTGVLHRITLALVKIYISIIRGTPMLVQISVVF 93

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +  P +G F             +  I  S    A+ +E VR+ + +VP+GQ EA   
Sbjct: 94  ---YGLPAIGIF--------IDPIPAAIIGFSLNIGAYASETVRAAISSVPKGQWEAGYT 142

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+ + +  R ++ PQA R  +PPL++ ++ L K++SLA  V   ++  V   + N +  
Sbjct: 143 IGMNYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYD 202

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + + +    +Y     ++     RL  ++A    +
Sbjct: 203 FLPVYIEAGLVYWCFCWILFFIQARLEKRMARYVAR 238


>gi|15896569|ref|NP_349918.1| amino acid ABC transporter permease [Clostridium acetobutylicum
           ATCC 824]
 gi|15026406|gb|AAK81258.1|AE007829_11 Amino acid ABC-type transporter, permease component [Clostridium
           acetobutylicum ATCC 824]
 gi|325510730|gb|ADZ22366.1| Amino acid ABC-type transporter, permease component [Clostridium
           acetobutylicum EA 2018]
          Length = 227

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 100/190 (52%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K  + L   Y+S  +I G P LV + + +   F  P +       G T+ P   +
Sbjct: 51  RISNIKPLELLARFYVS--IIRGTPLLVQLFIIF---FGLPTV-------GVTIKP-LTA 97

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I  +    A+ +E++R+ ++++P+GQ EAA ++G+T+ ++   V+LPQA R  +PPL 
Sbjct: 98  AIIGFTLSVGAYNSEVIRAAILSIPKGQWEAASSIGMTYTQSLVRVVLPQAARVSVPPLA 157

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++L+K++SLA  +  A++  V   I   T + + + +   FIY     ++ L  + L
Sbjct: 158 NSFISLVKDTSLAATITVAEMFQVAQRITATTYEPLWMYIEAAFIYYIFCSLLTLIQHYL 217

Query: 389 NAKIALKEKK 398
             K+A    +
Sbjct: 218 EKKLARYTTR 227



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 39/103 (37%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F+ +   +    + S+   +  G   T  L     I   ++  +    R+S  K +  + 
Sbjct: 3   FDTNTLRIIKILEDSFLPLLTAGLKFTVPLTLISFILGLLLALVTALARISNIKPLELLA 62

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           R YV + R  P LV +F ++  + +V            G  L+
Sbjct: 63  RFYVSIIRGTPLLVQLFIIFFGLPTVGVTIKPLTAAIIGFTLS 105


>gi|56420513|ref|YP_147831.1| glutamine ABC transporter permease [Geobacillus kaustophilus
           HTA426]
 gi|261420186|ref|YP_003253868.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|297529845|ref|YP_003671120.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. C56-T3]
 gi|319766998|ref|YP_004132499.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. Y412MC52]
 gi|56380355|dbj|BAD76263.1| glutamine ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
 gi|261376643|gb|ACX79386.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|297253097|gb|ADI26543.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. C56-T3]
 gi|317111864|gb|ADU94356.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC52]
          Length = 217

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 18/222 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  +     T+  +    + S  LG ++++F     R          PL ++ T  + 
Sbjct: 10  HWDLYMQGFGHTIKASVLALIGSLALGTIIAIFRIAPIR----------PLNWVGTAYVE 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  + L+ + +      P +              F +  + L  YTAAFIAE +RSG+ 
Sbjct: 60  FIRNIPLVLIVFVFFMGLPAV--------GIRFDSFTAGTLGLMVYTAAFIAEAIRSGIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQMEAA + GLT+ +A R V+LPQA++ +IPPL +Q++NL+KNSS+   +   DL+
Sbjct: 112 AVPKGQMEAARSSGLTYLQAMRYVILPQAVKIVIPPLGNQFINLVKNSSVLGVIAGLDLM 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  I ++T    ++ +     YL L+I ++L +  L  ++
Sbjct: 172 YYGDLISSKTFVTFDVYIFVALFYLVLTIPLSLGVGYLERRL 213



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 44/103 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    + GF +T   +   +I +  +GT++   R++  + + W+   YVE  RNIP +++
Sbjct: 10  HWDLYMQGFGHTIKASVLALIGSLALGTIIAIFRIAPIRPLNWVGTAYVEFIRNIPLVLI 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +F  +  + +V    D       G+ +         +     A
Sbjct: 70  VFVFFMGLPAVGIRFDSFTAGTLGLMVYTAAFIAEAIRSGIQA 112


>gi|228960421|ref|ZP_04122073.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229129433|ref|ZP_04258404.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-Cer4]
 gi|228654038|gb|EEL09905.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-Cer4]
 gi|228799282|gb|EEM46247.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 222

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 16  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 69  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 119 DKGQTEAAMALGVPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 179 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 222



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +      Y  +F
Sbjct: 6   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADFYTSIF 65

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 66  RGTPLVLQLMIIYFGVPQI 84


>gi|126665865|ref|ZP_01736846.1| glutamine ABC transporter permease [Marinobacter sp. ELB17]
 gi|126629799|gb|EBA00416.1| glutamine ABC transporter permease [Marinobacter sp. ELB17]
          Length = 223

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 95/189 (50%), Gaps = 23/189 (12%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           +  R     + +  +  P+L    F+ +GLP LV                      G  +
Sbjct: 53  WYFRWPATTYIEIFRGTPILVQVLFIFYGLPDLV----------------------GGPI 90

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P  ++   A++  + A+I+E+VR G+ ++ RGQ EA ++LGL+  ++   ++ PQA R 
Sbjct: 91  DP-LVAGIAAIALNSGAYISEVVRGGVQSIDRGQTEAGLSLGLSRTQSFWSIVWPQAFRR 149

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPPL +Q +  +K++SL   +G  +LV  G   I  T  A E+  +   +YL++++ ++
Sbjct: 150 MIPPLGNQAIVSIKDTSLFSVIGVGELVRQGQVYIANTFTAFEVYFVVALMYLAITLSLS 209

Query: 383 LFMNRLNAK 391
           + +  +  +
Sbjct: 210 MVLRYMEKR 218



 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 37/76 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F G++   ++G L G   ++ +    W    Y+E+FR  P LV + F+
Sbjct: 19  LAKGIPYTLMISFGGLVIGFLLGILFGLLSINKHWYFRWPATTYIEIFRGTPILVQVLFI 78

Query: 149 YKSVLSVLPIPDHSIV 164
           +  +  ++  P   +V
Sbjct: 79  FYGLPDLVGGPIDPLV 94


>gi|148379388|ref|YP_001253929.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931051|ref|YP_001383764.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153935865|ref|YP_001387314.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. Hall]
 gi|148288872|emb|CAL82956.1| putative ABC transporter, permease protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152927095|gb|ABS32595.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152931779|gb|ABS37278.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. Hall]
 gi|322805728|emb|CBZ03293.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium botulinum H04402 065]
          Length = 219

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 13/227 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     +  R L F         KI + SF++ I L+     L  +   K    +   Y+
Sbjct: 1   MELNFDIIFRNLPFLLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ +   Y                        ++  I L+   AA+++EI
Sbjct: 61  EIF--RGSPLLIQLFFIYY-----------GLPSVGIAMDAEVAAVIGLALNGAAYMSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + + +LLK++SL   +
Sbjct: 108 IRAAIISIDRGQEEAGFSLGYTRFQNLYYIILPQAVKISVPPLVNGFSSLLKDTSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L   G  I ++T +  E+ L     Y  L+ ++++    +  +
Sbjct: 168 SITELTRSGNLIYSRTAKPFEVYLTLGLFYFVLTYIVSICSKFIEKR 214



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           +L   + T  +     I A  +  +VG  R     K++  I   YVE+FR  P L+ +FF
Sbjct: 15  LLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIFRGSPLLIQLFF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +Y  + SV    D  +    G+ LN     
Sbjct: 75  IYYGLPSVGIAMDAEVAAVIGLALNGAAYM 104


>gi|317488403|ref|ZP_07946956.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
 gi|316912447|gb|EFV34003.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
          Length = 324

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                   +   T   I V + V+ + L +    LS        + +  +Y+   ++  +
Sbjct: 14  FERWPDILMAFGTTVGISVLALVIALALGIVFGVLS-VSRIPVLRGITRVYVE--VVQNV 70

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + + Y +         F  +G S     F    +A+  Y   +I+E+VRSG+ ++
Sbjct: 71  PLLLQVFVFYAI---------FPLLGLSL--AAFWIGVLAIGIYHGGYISEVVRSGIGSI 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA + G ++ ++  +++LPQA+R I+PPL  Q  NL+KN+S+   +   +L+  
Sbjct: 120 HRGQFEAAKSQGFSYWQSMFVIILPQAIRIIMPPLAVQAANLVKNTSVLALIAGGELMYF 179

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +    T     + ++   +Y ++   ++     L  +
Sbjct: 180 SNSFAGATSYYGPVYVVAALLYFAICFPLSRLALYLEHR 218



 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 70/200 (35%), Gaps = 16/200 (8%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL+ F  T  ++   ++ A  +G + G   +S   ++  I RVYVEV +N+P L+ +F  
Sbjct: 20  ILMAFGTTVGISVLALVIALALGIVFGVLSVSRIPVLRGITRVYVEVVQNVPLLLQVFVF 79

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN---------RGLSFPTLTMDTNAKIFVFSFVLGIV 199
           Y     +        +    + + +          G+          AK   FS+   + 
Sbjct: 80  YAIFPLLGLSLAAFWIGVLAIGIYHGGYISEVVRSGIGSIHRGQFEAAKSQGFSYWQSMF 139

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           + +    +            PL   +  L+     L LIA    ++F     G  ++ G 
Sbjct: 140 VIILPQAIRIIMP-------PLAVQAANLVKNTSVLALIAGGELMYFSNSFAGATSYYGP 192

Query: 260 STVSPEFMSLYIALSCYTAA 279
             V    +   I       A
Sbjct: 193 VYVVAALLYFAICFPLSRLA 212


>gi|255263034|ref|ZP_05342376.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62]
 gi|255105369|gb|EET48043.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62]
          Length = 293

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 120/286 (41%), Gaps = 15/286 (5%)

Query: 120 SANKLVAWICRVYVEVFRNIP----PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           S  K + W+  + + +   I       +     Y     ++P            +  N  
Sbjct: 3   SFLKRMRWLDWLILALLAGITGYIGLRMQGALNYDWRWELIPDYILRYREDRQEWFPNLL 62

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLI 229
           L     T+  +    + + ++G +L +         RL    + +  + +P + I     
Sbjct: 63  LQGLFATIRISIYASILALIIGTILGVARCSENLTTRLLARTYLELLRNIPPVVIIFIFF 122

Query: 230 FGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F L   ++ A+        +           F G     P  +S  I L+ + AAF+ EI
Sbjct: 123 FFLSQQLIDAINLNSWSRGIARGDNAHIWEFFFGEMRRFPSLISGVIVLAMFEAAFVGEI 182

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ +VP+GQ EAA A+G++  +  R +++PQAMR ++PP+ +Q+++L+K+SS+   +
Sbjct: 183 VRAGIQSVPKGQREAARAIGMSSFQEMRYIIMPQAMRKVVPPMANQFISLIKDSSIISLI 242

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              +L      ++  T    E  L     Y  L   +++   RL  
Sbjct: 243 SVQELTYKTVELVASTRLIFEAWLTTAAFYFILCFGLSMLFRRLEN 288



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 2/132 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++    I A IIGT++G  R S N     + R Y+E+ RNIPP+V+IF  
Sbjct: 62  LLQGLFATIRISIYASILALIIGTILGVARCSENLTTRLLARTYLELLRNIPPVVIIFIF 121

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +   L    +      G+   +    +     +      + S V  IVL++F     
Sbjct: 122 FFFLSQQLIDAINLNSWSRGIARGDNAHIWEFFFGEMRRFPSLISGV--IVLAMFEAAFV 179

Query: 209 RHFHEKTGKALP 220
                   +++P
Sbjct: 180 GEIVRAGIQSVP 191


>gi|239834901|ref|ZP_04683229.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822964|gb|EEQ94533.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 595

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 107/258 (41%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +     +   + S+   P     +    F     L     T+   A   V   +LG +L+
Sbjct: 41  VFAAIVIGLVLYSIFTNPQWGWNVFAEWFFAEPVLVGLGRTLLLTALAAVSGSILGTLLA 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     S      +   + LL     ++  L    L  L   +    P   +  F   + 
Sbjct: 101 LARVSRSPLLSGLSWGYIWLLRSIPLIVLLLILNNLGYLYANITLSVPFTDRVLFDYPTV 160

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F + ++ L+   +AF AEIVR G+++V +GQ EAA ALGL   +    ++LPQAM
Sbjct: 161 QLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDQGQHEAAAALGLPRTRQALRIVLPQAM 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           RSI+P   ++ + L K +S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 221 RSILPTGFNEIIGLAKGTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLVIMTV 280

Query: 381 IALFMNRLNAKIALKEKK 398
           +++    +    A    +
Sbjct: 281 LSVAQYYIERYFAKGAVR 298



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           LVG   T  L     +  +I+GTL+   R+S + L++ +   Y+ + R+IP
Sbjct: 75  LVGLGRTLLLTALAAVSGSILGTLLALARVSRSPLLSGLSWGYIWLLRSIP 125


>gi|242279376|ref|YP_002991505.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122270|gb|ACS79966.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 297

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 111/261 (42%), Gaps = 10/261 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            +     Y    SV+P          G +          +T+  +    + + V G ++ 
Sbjct: 29  HLAQGLNYNWDWSVIPDYIARYDSNSGDWRAGMLTQGLLVTLRLSLWSILLALVAGTIMG 88

Query: 202 LFAT------RLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHF---DKPVL 251
           ++        R+    +    + +P L+ I  F  F    ++      +L +   D    
Sbjct: 89  MWRVSPRPLLRMISSSYVGLVRNIPPLVLIFIFYFFLGDQIMQATGITELSYSLDDSTSP 148

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                 G     P F+S  + ++ +  A+I EIVR+G+ ++ + Q EA+ ALG   R   
Sbjct: 149 ILTTLFGPVEQLPAFLSGVLTMALFEGAYITEIVRAGIESIDQEQWEASAALGFNRRNQL 208

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQA    +PPL  Q+++ +K+SS+   +   +L   G  +++ T +  EI  + +
Sbjct: 209 VHIILPQAFSRSLPPLAGQFISTIKDSSIVSVISIQELTFAGQELMSATYRTFEIWSLVI 268

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            +Y  L+   ++ + +L  K+
Sbjct: 269 IMYFILTFPCSIGVRKLEIKM 289



 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 7/147 (4%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVP-----YTSDSSYATA--ILVGFVNTFWLAFSGMIPAT 108
            +      L++   +  D  ++P     Y S+S    A  +  G + T  L+   ++ A 
Sbjct: 22  GVLFTFWHLAQGLNYNWDWSVIPDYIARYDSNSGDWRAGMLTQGLLVTLRLSLWSILLAL 81

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           + GT++G  R+S   L+  I   YV + RNIPPLV+IF  Y  +   +        L + 
Sbjct: 82  VAGTIMGMWRVSPRPLLRMISSSYVGLVRNIPPLVLIFIFYFFLGDQIMQATGITELSYS 141

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +  +   +             F+   +
Sbjct: 142 LDDSTSPILTTLFGPVEQLPAFLSGVL 168


>gi|301065633|ref|YP_003787656.1| amino acid ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|300438040|gb|ADK17806.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei str. Zhang]
          Length = 237

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 5/206 (2%)

Query: 187 AKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             I + SF +G++++L    TR+S         A        +L    P LV + + +  
Sbjct: 21  ISIALVSFAIGLIIALITALTRISVRKGFWITFAKGFASFYVWLFRSTPLLVQLFIVF-- 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L               ++  I  S  T A+ +E +R+ L+++  GQ EAA ++G
Sbjct: 79  -FGLPSLIIPGIFPHGIKLDPVVAGIITFSLNTGAYCSETIRAALLSIDHGQWEAAYSVG 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R   R +++PQA+R+ +PPL++ +++L+K++SLA ++   ++  V   I  +  Q +
Sbjct: 138 LPRRLVLREIIIPQALRTAVPPLSNSFISLVKDTSLAASITIVEMFQVSQQIAAENYQPL 197

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
            +  +   +Y  +  ++      L  
Sbjct: 198 LMYSLVALLYAVVCTVLTWGQRYLEK 223


>gi|89056449|ref|YP_511900.1| amino acid ABC transporter permease [Jannaschia sp. CCS1]
 gi|88865998|gb|ABD56875.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Jannaschia sp. CCS1]
          Length = 293

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 58/285 (20%), Positives = 109/285 (38%), Gaps = 21/285 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
                 I  + V  F  I   +     Y     ++P            +  N  L     
Sbjct: 9   RWPDYLIAALLVAFFGYIAYAIEGTLNYNWRWHLIPNYIVGWHTSREEYFANLLLQGLAA 68

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP-------- 233
           T+  +    V + +LG VL +     +R     T + L   Y+                 
Sbjct: 69  TIRISIYASVLALILGTVLGI-----ARTSANLTIRMLARTYLELLRNIPPVVVVFIFFF 123

Query: 234 --------TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                    L L      +     +     F G     P  +S  + L+ + +AF+ EIV
Sbjct: 124 FLSQQLIDLLNLERWARGIARQDDIAVWGFFFGDMRRFPSLISGVVVLALFESAFVGEIV 183

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +VP+GQ EAA ++G++  +  R ++LPQAM+ ++PP+ +Q++ L+K+SS+   + 
Sbjct: 184 RAGIQSVPKGQREAARSIGMSRWQELRYIVLPQAMKKVVPPMANQFITLIKDSSIISLIS 243

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +L      ++  +    E  +     Y  +   ++    RL  
Sbjct: 244 VQELTYKTVELVASSRLIFEAWITTAAFYFIVCFGLSRLFARLEK 288



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++    + A I+GT++G  R SAN  +  + R Y+E+ RNIPP+VV+F  
Sbjct: 62  LLQGLAATIRISIYASVLALILGTVLGIARTSANLTIRMLARTYLELLRNIPPVVVVFIF 121

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +   L    +      G+   +    +     D      + S V  +VL+LF +   
Sbjct: 122 FFFLSQQLIDLLNLERWARGIARQDDIAVWGFFFGDMRRFPSLISGV--VVLALFESAFV 179

Query: 209 RHFHEKTGKALP 220
                   +++P
Sbjct: 180 GEIVRAGIQSVP 191


>gi|311071018|ref|YP_003975941.1| cystine ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310871535|gb|ADP35010.1| cystine ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 234

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 110/229 (48%), Gaps = 15/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +        +  +     + + SF+ G++++L  T L+R       + +  +Y+S  
Sbjct: 17  WDLVEQSFWPILSGGIYYTIPLTILSFIFGMIIALV-TALARMSKITPLRWVFGVYVSA- 74

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            + G P LV + + + +           F   +     F S  IA S    A+ +EI+R+
Sbjct: 75  -VRGTPLLVQLFIIFYM-----------FPAFNITLDPFPSAIIAFSLNVGAYASEIIRA 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +++VP+GQ EA   +G+TH+K    V+LPQA R  IPPL++ +++L+K++SLA  +   
Sbjct: 123 SILSVPKGQWEAGYTIGMTHQKTLFRVILPQAFRVSIPPLSNTFISLIKDTSLASQILVV 182

Query: 348 DLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      I  +   Q + I +   FIY  +  +++L  + +  ++   
Sbjct: 183 ELFRKAQEIGARNLDQILVIYIEAAFIYWIICSLLSLAQHLIERRLDRY 231



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 75  GIVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             +P+   + S+   +  G   T  L     I   II  +    R+S    + W+  VYV
Sbjct: 13  TAIPWDLVEQSFWPILSGGIYYTIPLTILSFIFGMIIALVTALARMSKITPLRWVFGVYV 72

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
              R  P LV +F ++    +     D          LN
Sbjct: 73  SAVRGTPLLVQLFIIFYMFPAFNITLDPFPSAIIAFSLN 111


>gi|171318717|ref|ZP_02907859.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171096084|gb|EDT41011.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 603

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 1/255 (0%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  +   + SVL  P     +    F +   L+    T+   A   V  F L I L+L  
Sbjct: 46  IVLIAAVLYSVLGNPRWGWNVFAHWFFSEAVLAGLGQTLLLTALGAVLGFALAIPLALAR 105

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VS 263
              S      +     L      ++  L    L  L   +    P        G +T + 
Sbjct: 106 LSRSPLLSSCSWAYTWLFRSIPTIVLLLLLNNLGYLYDTVRLGIPFTDIVFLRGPTTDLI 165

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             FM+  + L+   AAF AE +R G+++V  GQ EAA ALGL   + T  ++LPQAMR+ 
Sbjct: 166 TPFMAAILGLTLTQAAFAAEAIRGGILSVDHGQREAAAALGLPRARQTWRIVLPQAMRAT 225

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P   +  + L K +++   +   DL      + ++  + I ++++    YL +   ++ 
Sbjct: 226 LPAAFNDVIGLAKGTAVVYILAMPDLFYTVQIVYHRNLEVIPMLMVATVWYLVILTALSA 285

Query: 384 FMNRLNAKIALKEKK 398
               +    A    +
Sbjct: 286 IQVHIERHYARGATR 300



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           A+L G   T  L   G +    +   +   RLS + L++     Y  +FR+IP +V
Sbjct: 75  AVLAGLGQTLLLTALGAVLGFALAIPLALARLSRSPLLSSCSWAYTWLFRSIPTIV 130


>gi|134298610|ref|YP_001112106.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfotomaculum reducens MI-1]
 gi|134051310|gb|ABO49281.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfotomaculum reducens MI-1]
          Length = 222

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 19/210 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             +   + + ++G+V + F     +       + +  LYI+  L+ G P +V +   Y  
Sbjct: 25  LTSVSLLLAMIIGLVFAFF-----KISRNYFLQNIANLYIT--LVRGTPLVVQLMFLY-- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V P F +  +AL+ +  A+IAEI R  + ++ +GQMEAA +LG
Sbjct: 76  ----------FGIIKLVVLPAFWAGSLALAIHAGAYIAEIFRGAIQSINQGQMEAARSLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++  + R ++LPQA R  IPPL +Q++  LK+SSL   +G  ++         +  Q  
Sbjct: 126 MSYPLSMRRIILPQAFRRAIPPLGNQFIIGLKDSSLVAYLGVPEIYGTALYAQAENFQPF 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E  L+    YL L I+ +  +N+L AK+ +
Sbjct: 186 ETYLVAGLYYLVLVIIFSFLVNKLEAKLNV 215



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 36/75 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A +   + T  L    ++ A IIG +    ++S N  +  I  +Y+ + R  P +V + F
Sbjct: 14  AFMEATIVTLKLTSVSLLLAMIIGLVFAFFKISRNYFLQNIANLYITLVRGTPLVVQLMF 73

Query: 148 LYKSVLSVLPIPDHS 162
           LY  ++ ++ +P   
Sbjct: 74  LYFGIIKLVVLPAFW 88


>gi|89901741|ref|YP_524212.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89346478|gb|ABD70681.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 217

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 12/210 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++F+ + VL + L L    L R    +   +L   YI  +L+ G P ++ +   Y    
Sbjct: 19  LQVFLITLVLAVPLGLGL-ALLRISRFRFLSSLVNGYI--WLMRGTPLMLQMLFIYFALP 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV+            P+F S  +A     +A+ AEI R+G+ ++ RGQ E A  LGL+
Sbjct: 76  FIPVV--------GVRLPDFPSAILAFVLNYSAYFAEIFRAGIQSIDRGQYEGAQVLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R ++LPQ ++ I+PP++++ + L+K++SL   +   DL+     I+ +    +  
Sbjct: 128 YPQTMRRIVLPQVLKRILPPMSNETITLVKDTSLIYVLAMNDLLRAARGIVQRDFTTMP- 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++    YL +++++     RL  K A+ +
Sbjct: 187 FVVAAAFYLFMTLVLTYGFQRLEKKYAVYD 216



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ A  +G  +   R+S  + ++ +   Y+ + R  P ++ + F+
Sbjct: 11  LLQGSGITLQVFLITLVLAVPLGLGLALLRISRFRFLSSLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  +  +       P
Sbjct: 71  YFALPFIPVVGVRLPDFP 88


>gi|13475942|ref|NP_107512.1| amino acid ABC transporter protein, permease protein [Mesorhizobium
           loti MAFF303099]
 gi|14026702|dbj|BAB53298.1| amino acid ABC transporter protein, permease protein [Mesorhizobium
           loti MAFF303099]
          Length = 219

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 16/232 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---TRLSRHFHEKTGKALPLLYIS 225
           M  +   +     T+    KI + + +LG VL+        L+R    K       +  S
Sbjct: 1   MEWDWDFVWQIMPTLIQGVKITILATLLGSVLAAIVGLGIALARRSPNKALSRT--VGWS 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G P LV +   + +  D  +L            P  ++  I L  +   + AE+ 
Sbjct: 59  AEFIRGTPLLVQLYFIFYVLPDIGILL-----------PPLVAGVIGLGLHYGTYTAEVY 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  VPRGQ EAA A  L+ R+    +++PQA+  +IP L + ++ + K + L  A+ 
Sbjct: 108 RAGIDNVPRGQWEAAKACNLSARQTWTHIIIPQAIPPMIPALANYFIAMFKETPLLSAIT 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L++   ++ N   + IE I +    +L++S+   + +  L  +    E+
Sbjct: 168 VLELMNQARSVANTYYRYIEPITLVGAFFLAISLCSVVLLRWLERRYGKIER 219



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         ++ G   T      G + A I+G  +   R S NK ++       E  R
Sbjct: 4   DWDFVWQIMPTLIQGVKITILATLLGSVLAAIVGLGIALARRSPNKALSRTVGWSAEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
             P LV ++F++  +  +  
Sbjct: 64  GTPLLVQLYFIFYVLPDIGI 83


>gi|148653869|ref|YP_001280962.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148572953|gb|ABQ95012.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 241

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 3/188 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +  + LP LYI  F   G P LV I L Y     +    + + +    +   F  
Sbjct: 44  RLSASRWVQVLPFLYIFFF--RGTPLLVQIFLIYY-GLSQFEFIKDSALWEPVLKQPFWC 100

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA +  T+A+ AEI+R  + ++P G++EAA A+G++  +    + LP+A   ++P  +
Sbjct: 101 AIIAFTLNTSAYTAEIIRGAIQSIPPGELEAADAIGMSRWQKLTRITLPRAFGIMLPAYS 160

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ + +LK SSLA+ +   D+  +  TI  +T    E+      IYL LS +I L    L
Sbjct: 161 NEVIFMLKGSSLAMTIALMDITGIAKTISARTYTIFELYFAAGLIYLVLSWVILLTFRFL 220

Query: 389 NAKIALKE 396
             ++    
Sbjct: 221 EKRMNRHH 228


>gi|324324680|gb|ADY19940.1| amino acid ABC transporter, permease protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 218

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LGI+L++      R           L ++    +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGIILAVMRIAPIRI----------LNWLGATFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGIILAVMRIAPIRILNWLGATFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|290890238|ref|ZP_06553318.1| hypothetical protein AWRIB429_0708 [Oenococcus oeni AWRIB429]
 gi|290480125|gb|EFD88769.1| hypothetical protein AWRIB429_0708 [Oenococcus oeni AWRIB429]
          Length = 176

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 43/126 (34%), Positives = 72/126 (57%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S  I +S  T A++AEI+R G+I++ +GQ EAA ALG+TH +    ++LPQA+R+ IP 
Sbjct: 25  TSALIIVSINTGAYLAEIIRGGIISIDQGQFEAASALGMTHFQQMEKIVLPQAVRNSIPA 84

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +T++++  +K++S+   +  ++L   G TI  Q  Q     L    IYL L+  I     
Sbjct: 85  VTNEFIVNIKDTSVLSIISVSELFFTGSTIAGQNFQFFHTYLTISLIYLVLTFTITRIFR 144

Query: 387 RLNAKI 392
            +   +
Sbjct: 145 MIEKHL 150


>gi|227495201|ref|ZP_03925517.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces coleocanis DSM 15436]
 gi|226831653|gb|EEH64036.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces coleocanis DSM 15436]
          Length = 314

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 7/240 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    + +           L +     + + S V+G +L++    + R       + +  
Sbjct: 38  NPNFNWPLVWQWLFSRTIMLGVAYTIMLTIGSMVIGTILAV-TMAIMRQSPNPILRGVSW 96

Query: 222 LYISTFLIFGLPTLVLIA-----LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            +I  F    + T ++       L  QL    P   +F      T     +   + L   
Sbjct: 97  FFIWFFRGTPIYTQLIFWSLLPVLYPQLSLGIPFGPEFVQFETKTYFTPMLMALVGLGLN 156

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AEI+R+GL +V +GQ EAA ALG+      R ++LPQ MR IIPPL ++ +++LK
Sbjct: 157 EGAYLAEIIRAGLNSVDKGQWEAATALGMNRSIILRRIILPQTMRVIIPPLGNETISMLK 216

Query: 337 NSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +SL  A+    +L              + +++     YL ++ ++ +    L       
Sbjct: 217 TTSLVSAIPITLELTWAAKDKGQFLFAPVPLLIDAAIWYLVITSILMVGQMYLERYFGRG 276



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 41/120 (34%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              ++  I++G   T  L    M+  TI+   +   R S N ++  +   ++  FR  P 
Sbjct: 48  QWLFSRTIMLGVAYTIMLTIGSMVIGTILAVTMAIMRQSPNPILRGVSWFFIWFFRGTPI 107

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
              + F     +    +       P  +    +    P L       +   +++  I+ +
Sbjct: 108 YTQLIFWSLLPVLYPQLSLGIPFGPEFVQFETKTYFTPMLMALVGLGLNEGAYLAEIIRA 167


>gi|327393252|dbj|BAK10674.1| octopine transport system permease protein OccM [Pantoea ananatis
           AJ13355]
          Length = 280

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 13/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F+ SF+ G VL++    L R        +    YI  F   G P ++ + L Y 
Sbjct: 56  PVTLGLFISSFLCGGVLAVGILAL-RMSRWGILSSFARGYILVF--RGSPLMIQLFLIYY 112

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S V P     F    +ALS  TAA+ AEI+R  L+AVP GQ+EA
Sbjct: 113 ------GLGQFGVIRHSFVWPFLREPFSCAVLALSLCTAAYTAEILRGALLAVPAGQVEA 166

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 167 GMACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 226

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T + +E+ L    IYL L+ +I      L  ++
Sbjct: 227 TYRTMEVFLCAAAIYLILNFIIVQLYALLERRL 259


>gi|229194959|ref|ZP_04321740.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1293]
 gi|228588527|gb|EEK46564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1293]
          Length = 218

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG+VL++      R           L ++   ++  + 
Sbjct: 13  MYLEGFKYTVLSSVIALIGSFILGVVLAVMRIAPIRI----------LNWLGAAIVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+    VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVLSSVIALIGSFILGVVLAVMRIAPIRILNWLGAAIVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|229159721|ref|ZP_04287730.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus R309803]
 gi|228623746|gb|EEK80563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus R309803]
          Length = 218

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVLALIGSFILGVILAVMRIAPIRV----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVLALIGSFILGVILAVMRIAPIRVLNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|301169820|emb|CBW29424.1| predicted transporter subunit: membrane component of ABC
           superfamily [Haemophilus influenzae 10810]
          Length = 225

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 13/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                 +    T+      F    ++ +++++  T  S +   K  +AL  +YIS  +I 
Sbjct: 13  FWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIR 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I + +   +  P +       G T+ P F +  IA S    A+ AE VR+ +I
Sbjct: 71  GTPMLVQIFIIF---YGLPEV-------GITLEP-FPTAIIAFSINIGAYAAETVRASII 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EA+ A+G+ +R+A    ++PQA+R  +P L++ +++ +K++SLA  V   +L 
Sbjct: 120 AIPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELF 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            V   I     + I I      IY     +++   +RL  +++ 
Sbjct: 180 RVAQNITAANYEFILIYSEAALIYWVFCFVLSFLQDRLEIRLSR 223



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFR 137
           SS+   +    + T  LA        +I  +V   R   +      L+  +CRVY+ + R
Sbjct: 11  SSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYISIIR 70

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             P LV IF ++  +  V    +          +N    +  T+     A 
Sbjct: 71  GTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAI 121


>gi|229553604|ref|ZP_04442329.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus rhamnosus LMS2-1]
 gi|258538745|ref|YP_003173244.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|229313024|gb|EEN78997.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus rhamnosus LMS2-1]
 gi|257150421|emb|CAR89393.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 237

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 5/210 (2%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      F    ++ +V +L    + +    +  K + + Y+  F     P LV + +
Sbjct: 19  YTIPIALVSFAIGLIIALVTALTRISVRKGILIRIAKGIAVFYVWLF--RSTPLLVQLFI 76

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +   F  P L                +  I  S  T A+ AE +R+ L+++  GQ EAA
Sbjct: 77  VF---FGLPSLIIPGIFPHGIKLDPVAAGIITFSLNTGAYCAETIRASLLSIDSGQWEAA 133

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+GL  R   R +++PQA+R+ IPPL++ +++L+K++SLA ++   ++  V   I  + 
Sbjct: 134 YAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQVSQQIAAEN 193

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            Q + +  I   +Y  +   +A     L  
Sbjct: 194 YQPLLMYSIVALLYAIVCTFLAWGQRHLEK 223


>gi|228902666|ref|ZP_04066816.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis IBL 4222]
 gi|228941315|ref|ZP_04103868.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228967196|ref|ZP_04128232.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|229071660|ref|ZP_04204877.1| Arginine transport system permease protein artQ [Bacillus cereus
           F65185]
 gi|229081412|ref|ZP_04213914.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock4-2]
 gi|229152355|ref|ZP_04280547.1| Arginine transport system permease protein artQ [Bacillus cereus
           m1550]
 gi|229192365|ref|ZP_04319329.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 10876]
 gi|228591145|gb|EEK49000.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 10876]
 gi|228630963|gb|EEK87600.1| Arginine transport system permease protein artQ [Bacillus cereus
           m1550]
 gi|228701902|gb|EEL54386.1| Arginine transport system permease protein artQ [Bacillus cereus
           Rock4-2]
 gi|228711455|gb|EEL63413.1| Arginine transport system permease protein artQ [Bacillus cereus
           F65185]
 gi|228792565|gb|EEM40131.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228818474|gb|EEM64546.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228856981|gb|EEN01491.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis IBL 4222]
          Length = 222

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 16  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 69  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 119 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 179 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 222



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +      Y  +F
Sbjct: 6   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADFYTSIF 65

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 66  RGTPLVLQLMIIYFGVPQI 84


>gi|69246348|ref|ZP_00603904.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|257878164|ref|ZP_05657817.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257881052|ref|ZP_05660705.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884713|ref|ZP_05664366.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257889637|ref|ZP_05669290.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257892423|ref|ZP_05672076.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257898671|ref|ZP_05678324.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|258616330|ref|ZP_05714100.1| glutamine transport system permease protein [Enterococcus faecium
           DO]
 gi|260559211|ref|ZP_05831397.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207744|ref|ZP_05922429.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289565819|ref|ZP_06446261.1| glutamine ABC transporter permease glnM [Enterococcus faecium
           D344SRF]
 gi|293554037|ref|ZP_06674637.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1039]
 gi|293563129|ref|ZP_06677594.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1162]
 gi|293569786|ref|ZP_06680873.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1071]
 gi|293572582|ref|ZP_06683556.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E980]
 gi|294614007|ref|ZP_06693937.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1636]
 gi|294623309|ref|ZP_06702171.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium U0317]
 gi|314939890|ref|ZP_07847096.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943737|ref|ZP_07850476.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314949693|ref|ZP_07853011.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314953239|ref|ZP_07856178.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314993681|ref|ZP_07859029.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314997402|ref|ZP_07862353.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|68195301|gb|EAN09752.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|257812392|gb|EEV41150.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257816710|gb|EEV44038.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257820551|gb|EEV47699.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257825997|gb|EEV52623.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257828802|gb|EEV55409.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|257836583|gb|EEV61657.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|260074968|gb|EEW63284.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078127|gb|EEW65833.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289162362|gb|EFD10220.1| glutamine ABC transporter permease glnM [Enterococcus faecium
           D344SRF]
 gi|291587534|gb|EFF19411.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1071]
 gi|291593114|gb|EFF24693.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1636]
 gi|291597277|gb|EFF28466.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium U0317]
 gi|291601819|gb|EFF32071.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1039]
 gi|291604907|gb|EFF34376.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E1162]
 gi|291607365|gb|EFF36713.1| general L-amino acid transport system permease protein AapQ
           [Enterococcus faecium E980]
 gi|313588537|gb|EFR67382.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313591855|gb|EFR70700.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313594705|gb|EFR73550.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597600|gb|EFR76445.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640853|gb|EFS05433.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313643951|gb|EFS08531.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 215

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH---EKTGKALPLLYISTFLIFGL 232
           +           KI +FS VL +V SL    L   F     K   AL   Y+  F    L
Sbjct: 5   IQTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSALAKAYVEFFRNIPL 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +V+        +    +  FN  G       F +  I L+ YT+AFIAE VRSG+  V
Sbjct: 65  LIIVMFF------YVVVPIYWFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTV 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA ++ G T+ +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+  
Sbjct: 112 PKGQTEAGLSSGFTYSEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQ 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  I ++T    +  +I    YL +++ ++  M  L  K A++
Sbjct: 172 GDLIASETFNTFDTYIIVGLFYLVITLPLSYLMVYLEKKWAVR 214



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 46/94 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    + GF  T + +   ++ + IIGTL+   +LS NK+V+ + + YVE FRNIP L
Sbjct: 6   QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSALAKAYVEFFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +++ F Y  V       D       G+ +     
Sbjct: 66  IIVMFFYVVVPIYWFNLDGFQAGTIGLTIYTSAF 99


>gi|33592469|ref|NP_880113.1| putative amino-acid ABC transporter, permease protein [Bordetella
           pertussis Tohama I]
 gi|33601481|ref|NP_889041.1| putative amino-acid ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
 gi|33572115|emb|CAE41655.1| putative amino-acid ABC transporter, permease protein [Bordetella
           pertussis Tohama I]
 gi|33575917|emb|CAE32996.1| putative amino-acid ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
          Length = 226

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + SF  G+ L+ F   L R F      AL   Y+  +LI G P 
Sbjct: 12  FWPLLHAGLMFTVPLTLLSFAAGLALA-FVVALLRLFGPWPIVALMRFYV--WLIRGTPL 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + + +                   V     +  I  +    A+ +E++R  + ++PR
Sbjct: 69  LVQLFVIFY-----------GLPSVGIVLDPLPAALIGFTLNVGAYNSEVIRGAIESIPR 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +L +T  +A R  +LPQA R  +PPL + ++ L+K++SLA  +   ++     
Sbjct: 118 GQWEAAYSLSMTRGQAMRRTVLPQAARVAVPPLANSFIALVKDTSLAAVLTVPEIFQAAQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I   T + + +      IYL  S  ++    RL  +  
Sbjct: 178 RIAAVTYEPLILYTEAALIYLVFSSALSSLQVRLEKRFG 216



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G + T  L          +  +V   RL     +  + R YV + R  P L
Sbjct: 10  DSFWPLLHAGLMFTVPLTLLSFAAGLALAFVVALLRLFGPWPIVALMRFYVWLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV  + D       G  LN
Sbjct: 70  VQLFVIFYGLPSVGIVLDPLPAALIGFTLN 99


>gi|120555956|ref|YP_960307.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinobacter aquaeolei VT8]
 gi|120325805|gb|ABM20120.1| amino acid ABC transporter membrane protein, PAAT family
           [Marinobacter aquaeolei VT8]
          Length = 237

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNR----GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
             + P P     + F    + +     + +    +     I      +G VL +    LS
Sbjct: 3   WPIPPNPTEKHTVEFQFQFDWQAAINSIPYLAKGIPYTLMISFGGLAIGFVLGIVFGLLS 62

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
            +      +     YI  F   G P LV +   +              + G  + P   +
Sbjct: 63  IN-KNWFLRWPATAYIEIF--RGTPILVQVLFIFY---------GLPDLVGGPIDP-LTA 109

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              A++  + A+I+E+VR G+ ++ +GQ EA ++LGL+  +    ++ PQA R +IPPL 
Sbjct: 110 GIAAIALNSGAYISEVVRGGVQSIDKGQTEAGLSLGLSRSQTFWNIVWPQAFRRMIPPLG 169

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +Q +  +K++SL   +G  +LV  G   I  T  A E+  +   +YL+++
Sbjct: 170 NQAIVSIKDTSLFSVIGVGELVRQGQVYIANTFTAFEVYFVVAIMYLAIT 219



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 35/75 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G   T  ++F G+    ++G + G   ++ N  + W    Y+E+FR  P LV + F
Sbjct: 32  YLAKGIPYTLMISFGGLAIGFVLGIVFGLLSINKNWFLRWPATAYIEIFRGTPILVQVLF 91

Query: 148 LYKSVLSVLPIPDHS 162
           ++  +  ++  P   
Sbjct: 92  IFYGLPDLVGGPIDP 106


>gi|325528848|gb|EGD05896.1| amino acid ABC transporter inner membrane protein [Burkholderia sp.
           TJI49]
          Length = 219

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S +LG++  L A  + R    +    +   Y+S  ++ G P
Sbjct: 9   HTLPVMVQGAALTLKFAVSSMMLGLLAGL-AIAVVRIGGNRFAAGIAQGYVS--VMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G T+ P   +    L+   AA+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDL----------GITLDPT-TAGIFTLTLNAAAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAAAHSLGLTHVQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS +++    R+ +++AL
Sbjct: 175 QEVIAATFQPLPLYLAAAAIYWVLSTLLSRLQGRVESRLAL 215



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 37/85 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T   A S M+   + G  +   R+  N+  A I + YV V R  P LV +F 
Sbjct: 13  VMVQGAALTLKFAVSSMMLGLLAGLAIAVVRIGGNRFAAGIAQGYVSVMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDLGITLDPTTAGIFTLTLN 97


>gi|162447510|ref|YP_001620642.1| ABC transporter permease [Acholeplasma laidlawii PG-8A]
 gi|161985617|gb|ABX81266.1| ABC-type transport system, permease component [Acholeplasma
           laidlawii PG-8A]
          Length = 225

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 118/234 (50%), Gaps = 9/234 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   L+   +      +     + + + ++G ++++  T   R    K    +   Y+
Sbjct: 1   MDFSFLLDLFYVKTLLQGVLITIVLALIAVLMGTLIAVIPTYF-RLSKHKILNFIGGSYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P LV + L Y +    PV+       G      F+   +AL   ++A+ +E 
Sbjct: 60  E--IIRGTPLLVQVMLIYAI-VKLPVMTVLGMDFG-----AFLLGMVALIINSSAYASET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G++++ +GQ EA ++LG+T +     +++PQA+++I+P L ++++ L+K +S+ + +
Sbjct: 112 FRAGILSIEKGQKEAGLSLGMTEKSTMLHIIMPQAIKNIMPSLGNEFVTLIKETSIFMYL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ++L+     +   T +  E+ ++   +Y  L+   +  M++L  ++  +++K
Sbjct: 172 GISELMYSAQIVKTSTYRTKEVYIVTALLYFVLTFTTSKLMSKLEKRMRKQDEK 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 44/107 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T  LA   ++  T+I  +    RLS +K++ +I   YVE+ R  P LV 
Sbjct: 11  YVKTLLQGVLITIVLALIAVLMGTLIAVIPTYFRLSKHKILNFIGGSYVEIIRGTPLLVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +  +Y  V   +          F + +    ++      +T     +
Sbjct: 71  VMLIYAIVKLPVMTVLGMDFGAFLLGMVALIINSSAYASETFRAGIL 117


>gi|153011666|ref|YP_001372880.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563554|gb|ABS17051.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 595

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 1/263 (0%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +     +   + S+   P     +    F     L     T+   A   V   +L
Sbjct: 36  RFVGSVFAALVIGLVLYSIFTNPQWGWNVFAEWFFAEPVLVGLGRTLLLTALAAVSGSIL 95

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G +L+L     S      +   + LL     ++  L    L  L   +    P   +  F
Sbjct: 96  GTLLALARVSRSPLLSGLSWGYIWLLRSIPLIVLLLILNNLGYLYANITLSVPFTDRVLF 155

Query: 257 IGGST-VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              +  +   F + ++ L+   +AF AEIVR G+++V +GQ EAA ALGL   +    ++
Sbjct: 156 DYPTVQLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDQGQHEAAAALGLPRNRQALRIV 215

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMRSI+P   ++ + L K +S+   +   +L      I  +  + I ++++    YL
Sbjct: 216 LPQAMRSILPTGFNEIIGLAKGTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYL 275

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +  ++++    +    A    +
Sbjct: 276 VIMTVLSVAQYYIERYFAKGAVR 298



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           LVG   T  L     +  +I+GTL+   R+S + L++ +   Y+ + R+IP
Sbjct: 75  LVGLGRTLLLTALAAVSGSILGTLLALARVSRSPLLSGLSWGYIWLLRSIP 125


>gi|42779787|ref|NP_977034.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206978169|ref|ZP_03239051.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|42735704|gb|AAS39642.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206743641|gb|EDZ55066.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
          Length = 218

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LGI+L++      R           L ++   ++  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGIILAVMRIAPIRI----------LNWLGAAIVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+    VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGIILAVMRIAPIRILNWLGAAIVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|330505510|ref|YP_004382379.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328919796|gb|AEB60627.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 229

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 5/222 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L           ++   + + G++L+L    ++R       +ALP  YI  F   G 
Sbjct: 7   YKYLPKMFEGALLTVELLAVAVIAGLILAL-PMGIARASKHWYVRALPYGYIFFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + L Y        + Q  F     +   +    + ++ +TAA+IAEI+R  + AV
Sbjct: 64  PMLVQLFLIYYGLAQFDAVRQSVF--WPYLRDPYWCAVLTMTLHTAAYIAEILRGAIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P G++EAA ALG++  +A   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +
Sbjct: 122 PPGEIEAARALGMSRAQAMLHIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGM 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             T+  +T  ++E        YL+++ ++      L   + +
Sbjct: 182 ARTLNARTYVSMEFFFTAALFYLAITFVLINLFKLLERWLRV 223



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G + T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   YLPKMFEGALLTVELLAVAVIAGLILALPMGIARASKHWYVRALPYGYIFFFRGTPMLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +        
Sbjct: 69  LFLIYYGLAQFDAVRQSVFWPY 90


>gi|288935884|ref|YP_003439943.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288890593|gb|ADC58911.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 243

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 13/219 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F+ SF+LG VL+L    L R  H          YI  F   G P L+ + L Y 
Sbjct: 20  PVTLGLFICSFILGGVLALGVLAL-RMSHWPLASGFAKGYILIF--RGSPLLIQLFLIYY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S + P     F+   +AL+  TAA+ AEI+R GL+A+P GQ+EA
Sbjct: 77  ------GLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEA 130

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 131 GQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T + +E+ L    IYL L+ +I      L  ++    ++
Sbjct: 191 TYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTRQ 229


>gi|153952035|ref|YP_001398237.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939481|gb|ABS44222.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. doylei 269.97]
          Length = 261

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L   YI   LI G P LV + L Y +  
Sbjct: 68  LIISFFSLLLSIILGGVFCAFS-LSSIIFLRFLSTFYIE--LIRGTPLLVQVLLIYYIIA 124

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 125 NNLGLDN-----------RYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLK 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 174 EMQIFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 233

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I++F   L  K
Sbjct: 234 YVILAITYLVLTLPISIFSRYLERK 258



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 43/87 (49%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      +++ + Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 40  SFSISAYHFDFSAITIYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIIFLRFL 99

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 100 STFYIELIRGTPLLVQVLLIYYIIANN 126


>gi|260460035|ref|ZP_05808288.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mesorhizobium opportunistum WSM2075]
 gi|259034246|gb|EEW35504.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 16/232 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---TRLSRHFHEKTGKALPLLYIS 225
           M  +   +     T+    KI + + +LG VL+        L+R    K           
Sbjct: 1   MEWDWDFVRQILPTLIQGVKITILATLLGSVLAAIVGLGIALARRSPNKALSRTVGWAAE 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G P LV +   + +  D  +L            P  ++  I L  +   + AE+ 
Sbjct: 61  F--IRGTPLLVQLYFIFYVLPDIGILL-----------PPLVAGVIGLGLHYGTYTAEVY 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  VPRGQ EAA A  L+ R+    +++PQA+  +IP L + ++ + K + L  A+ 
Sbjct: 108 RAGIDNVPRGQWEAAKACNLSGRQTWSHIIIPQAIPPMIPALANYFIAMFKETPLLSAIT 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L++   ++ N   + IE I +    +L++S+   + +  L  +    E+
Sbjct: 168 VLELMNQAKSVANTYYRYIEPITLVGAFFLAISLCSVILLRWLERRYGKIER 219



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         ++ G   T      G + A I+G  +   R S NK ++       E  R
Sbjct: 4   DWDFVRQILPTLIQGVKITILATLLGSVLAAIVGLGIALARRSPNKALSRTVGWAAEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
             P LV ++F++  +  +  
Sbjct: 64  GTPLLVQLYFIFYVLPDIGI 83


>gi|251796880|ref|YP_003011611.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247544506|gb|ACT01525.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 217

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 115/219 (52%), Gaps = 18/219 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +     T+ ++    + SF LG ++++F          +     PL +I T  +  +  
Sbjct: 14  YMKGFVNTIWSSVVALLGSFALGTIIAVF----------RISSVKPLRWIGTAYVEFVRN 63

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + L+ + +  ++  P L              F+   + L+ YTA+F+AE +R+G++++P 
Sbjct: 64  IPLLLVVFVFYYGLPSL--------GVTLSGFICGTVGLTVYTASFVAEAIRAGIMSIPT 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A GLT+ +  R V+LPQA++ +IPPL++Q++NL+KNSS+       DL+  G 
Sbjct: 116 GQTEAARASGLTYTQTMRHVVLPQAVKIVIPPLSNQFINLVKNSSILGVFAGFDLMYYGD 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + ++T    +  +    +YL L+I ++    +L  ++A
Sbjct: 176 QVASKTYATFDTYIFVAALYLVLTIPLSFAALKLERRLA 214



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 40/67 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GFVNT W +   ++ +  +GT++   R+S+ K + WI   YVE  RNIP L+V+F  
Sbjct: 14  YMKGFVNTIWSSVVALLGSFALGTIIAVFRISSVKPLRWIGTAYVEFVRNIPLLLVVFVF 73

Query: 149 YKSVLSV 155
           Y  + S+
Sbjct: 74  YYGLPSL 80


>gi|71735739|ref|YP_277029.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257483717|ref|ZP_05637758.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|298489317|ref|ZP_07007332.1| Arginine transport system permease protein artM [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71556292|gb|AAZ35503.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298156168|gb|EFH97273.1| Arginine transport system permease protein artM [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320331786|gb|EFW87724.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330872637|gb|EGH06786.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330987162|gb|EGH85265.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331012130|gb|EGH92186.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 229

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 5/220 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAI-PMGIARASRHWPVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y       V+ Q        +   F    + ++ +TAA+IAEI+R  + AVP 
Sbjct: 66  LVQLFLVYYGLAQFDVVRQGPL--WPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPV 123

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  
Sbjct: 124 GEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMAR 183

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           TII +T   +EI       YL ++ ++      L   + +
Sbjct: 184 TIIARTYLPVEIFFAAGMFYLVMTFVLVQGFRLLEKLLRV 223



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAIPMGIARASRHWPVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +    +   
Sbjct: 69  LFLVYYGLAQFDVVRQGPLWPY 90


>gi|330816746|ref|YP_004360451.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
 gi|327369139|gb|AEA60495.1| Amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
          Length = 219

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           K  V S V G+VL++    L      +   A+  +Y+S  L+ G P L
Sbjct: 11  LPVLAQGAVLTVKFAVLSMVFGLVLAVVL-ALMGIARNRVLNAIARVYVS--LMRGTPLL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y   +  P L       G ++ P   +  IALS   AA+++E +R  ++ +  G
Sbjct: 68  VQIFVIY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAILGIESG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  A+ +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     
Sbjct: 117 QWLASYSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQE 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           II  T Q + + L    +Y  L  ++         ++AL  + 
Sbjct: 177 IIASTYQPLPLYLAAAAVYWVLCQVLEWVQRWWERRLALPTRH 219



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 40/95 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A   M+   ++  ++    ++ N+++  I RVYV + R  P LV IF 
Sbjct: 13  VLAQGAVLTVKFAVLSMVFGLVLAVVLALMGIARNRVLNAIARVYVSLMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +Y  + S+    D +      +  N       ++ 
Sbjct: 73  IYYGLPSLGISLDPTPAGVIALSANVAAYMSESMR 107


>gi|229591500|ref|YP_002873619.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229363366|emb|CAY50505.1| putative ABC transporter, permease [Pseudomonas fluorescens SBW25]
          Length = 330

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 110/269 (40%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R    +     L   V S+   P     +    F +   L     T+       VFS +
Sbjct: 47  WRWAGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSVLRGLGQTLLLTLLSTVFSII 106

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
           LG  L+L     +R        AL   YI  F       +++I   +   +D  VL    
Sbjct: 107 LGTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPF 161

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   +
Sbjct: 162 TGVVFAEWSTVDVLSQFTVAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAALGLPASR 221

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++
Sbjct: 222 RIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIV 281

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++      +    A    +
Sbjct: 282 ATVWYLIITTVLTSAQYYVERHFARGTAR 310



 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 1/133 (0%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-PLVVIFFLYKSVLSVLPIPDH 161
             + + I+GT +   RLS + L+A +   Y+  FR++P  LV+I     + L    +   
Sbjct: 100 STVFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGV 159

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                     +   +            +   ++   I+        +          LP 
Sbjct: 160 PFTGVVFAEWSTVDVLSQFTVAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAALGLPA 219

Query: 222 LYISTFLIFGLPT 234
                 +I     
Sbjct: 220 SRRIFRIILPQAL 232


>gi|324328060|gb|ADY23320.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 219

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 13  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DLYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQIIGYEI-------PAFVAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 219



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADLYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQI 81


>gi|226360988|ref|YP_002778766.1| cystine ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226239473|dbj|BAH49821.1| cystine ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 222

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                 T+     + + SF +G+V++L    L+R    +    L   Y+S  +I G P L
Sbjct: 14  WPMLKATITMTIPLTIISFTIGLVIALLV-ALARISSIRPLSVLARFYVS--IIRGTPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +        L QF    G T+ P F +  IA S     + AE++R+ ++++P+G
Sbjct: 71  VQLFIVFY------ALPQF----GVTLEP-FPAAVIAFSLNVGGYAAEVIRAAILSIPKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +G+ +    + ++LPQA R  +PPL++  ++L+K++SLA  +   +L+ V   
Sbjct: 120 QWEAAQTIGMGYTTTLQRIVLPQATRVAVPPLSNTLISLVKDTSLASTILVTELLRVAQL 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               T     +  +    Y  + I ++    RL A++     +
Sbjct: 180 AAAPTFDFFALYGVAALYYWVICIFLSAVQVRLEARLDRYVAR 222



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +      T  L         +I  LV   R+S+ + ++ + R YV + R  P L
Sbjct: 11  DNLWPMLKATITMTIPLTIISFTIGLVIALLVALARISSIRPLSVLARFYVSIIRGTPLL 70

Query: 143 VVIFFLYKSVLSV 155
           V +F ++ ++   
Sbjct: 71  VQLFIVFYALPQF 83


>gi|225862619|ref|YP_002747997.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|225789271|gb|ACO29488.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
          Length = 218

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LGI+L++      R           L ++    +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGIILAVMRIAPIRI----------LNWLGATFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGIILAVMRIAPIRILNWLGATFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|163856730|ref|YP_001631028.1| putative amino acid ABC transporter, permease protein [Bordetella
           petrii DSM 12804]
 gi|163260458|emb|CAP42760.1| putative amino acid ABC transporter, permease protein [Bordetella
           petrii]
          Length = 217

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 105/213 (49%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   +F  +F L + L L    L+R  H +    L   YI  +L+ G P ++ +   Y  
Sbjct: 17  TTLTLFFVTFALAVPLGLLL-ALARVSHWRLLSQLVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+++V RGQ E +  LG
Sbjct: 74  LPFVPVV--------GVRLPDFPAAIVAFALNYAAYFAEIFRAGILSVDRGQYEGSKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   D++     I+ +     
Sbjct: 126 MSYLQTMRRIVLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              L+    YL +++++      +  + A  ++
Sbjct: 185 TPFLVAAAFYLFMTLLLTWLFQHMEKRYAKYDQ 217



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L F     A  +G L+   R+S  +L++ +   Y+ + R  P ++ + F+Y +
Sbjct: 14  GAKTTLTLFFVTFALAVPLGLLLALARVSHWRLLSQLVNGYIWLMRGTPLMLQMLFIYFA 73

Query: 152 VLSVLPIPDHSIVLP 166
           +  V  +       P
Sbjct: 74  LPFVPVVGVRLPDFP 88


>gi|196042407|ref|ZP_03109669.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|196026753|gb|EDX65398.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
          Length = 219

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 13  PYILKGLEVTLKIVAVSALVGFILGTLLALCKIARIRALNIAA-------DLYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 219



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAVSALVGFILGTLLALCKIARIRALNIAADLYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQI 81


>gi|254975773|ref|ZP_05272245.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255314902|ref|ZP_05356485.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255517576|ref|ZP_05385252.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255650687|ref|ZP_05397589.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|260683774|ref|YP_003215059.1| putative amino-acid ABC transporter permease [Clostridium difficile
           CD196]
 gi|260687434|ref|YP_003218568.1| putative amino-acid ABC transporter permease [Clostridium difficile
           R20291]
 gi|306520612|ref|ZP_07406959.1| putative amino-acid ABC transporter, permease protein [Clostridium
           difficile QCD-32g58]
 gi|260209937|emb|CBA63909.1| probable amino-acid ABC transporter, permease protein [Clostridium
           difficile CD196]
 gi|260213451|emb|CBE05127.1| probable amino-acid ABC transporter, permease protein [Clostridium
           difficile R20291]
          Length = 220

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 110/231 (47%), Gaps = 15/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + + + L    +    +T+       VFS ++G +++L     S ++  K    +  +
Sbjct: 3   FNMKYFLELFPIIMKSFNVTVILAISSLVFSLIIGTIVAL-----SSYYKVKVLNQICKV 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G P +  +   + L+F    +  F             +  I LS    A+++
Sbjct: 58  YVSIF--RGTPLMPQL---FFLYFGLAYMNDF-----VKNMDPVFATSIVLSLNMGAYMS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ ++++ +GQ+EAA  +GLT+ +  + +++PQA+R  +P L + +++L+K SS+A 
Sbjct: 108 ETIRASILSIDKGQIEAAYVMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            VG  D++    +    + +  E+    M IY  +   +     +L  KI+
Sbjct: 168 VVGVNDIMGAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGQKKLEKKIS 218



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 YKSV 152
           Y  +
Sbjct: 75  YFGL 78


>gi|169826053|ref|YP_001696211.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168990541|gb|ACA38081.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 252

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 55/185 (29%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +   +K       LYI  F   G P LV I L +             ++         +S
Sbjct: 65  KLSSKKWIYWPSKLYIDLF--RGTPMLVQILLIHLAVIPTIFGHSLGYM---------VS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL    AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL 
Sbjct: 114 GITALILNCAAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLG 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ LLK+SSL   +   D++     +   + +  E  ++   +YL L+  +   +  +
Sbjct: 174 NEFIALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYMVAALLYLILTYGVTKIVAFI 233

Query: 389 NAKIA 393
             + +
Sbjct: 234 EKRFS 238



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 44/85 (51%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF +D   + +    +Y    + G   T  L  SG     ++G  +G G+LS+ K + W 
Sbjct: 16  GFRMDIFDLRWDIVWNYRDMFIRGIGVTLILTLSGYFGGILLGLFLGLGKLSSKKWIYWP 75

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVL 153
            ++Y+++FR  P LV I  ++ +V+
Sbjct: 76  SKLYIDLFRGTPMLVQILLIHLAVI 100


>gi|116492194|ref|YP_803929.1| ABC-type amino acid transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116102344|gb|ABJ67487.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 216

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 18/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                FS ++G + ++F    S+  H        +  I   ++  +P LV+    Y +  
Sbjct: 24  VIALFFSLIIGSMFAIFEVLPSKVLHT-------IGRIYVEVVRNIPLLVVTMFFYIV-- 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F++  I L+ YT+AFIAE VR+G+ +V  GQMEAA + G+T
Sbjct: 75  ---------IPQYVASINGFVAGTIGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGMT 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+ VG  I + +   I  
Sbjct: 126 YWQAMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMYVGNDIASTSFDTINS 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            L+   +YL +++ ++ +M  L  +
Sbjct: 186 YLVVGVMYLIITMPLSYYMRYLEKR 210



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 43/93 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+ + +L G   T   +   +  + IIG++     +  +K++  I R+YVEV RNIP LV
Sbjct: 7   SHGSELLSGLGQTVLCSVIALFFSLIIGSMFAIFEVLPSKVLHTIGRIYVEVVRNIPLLV 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           V  F Y  +   +   +  +    G+ +     
Sbjct: 67  VTMFFYIVIPQYVASINGFVAGTIGLTIYTSAF 99


>gi|261377587|ref|ZP_05982160.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria cinerea ATCC 14685]
 gi|269146335|gb|EEZ72753.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria cinerea ATCC 14685]
          Length = 248

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              +   LLY++ F   G P  V I +   + F   V             I         
Sbjct: 60  WVLRKFSLLYVTLF--RGTPLFVQIVIWAYVWFPFFVHPSDGILVNGEAAIELRRGYGPL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALVANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLENRYNPQHR 248


>gi|229140887|ref|ZP_04269432.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST26]
 gi|229198282|ref|ZP_04324989.1| Arginine transport system permease protein artQ [Bacillus cereus
           m1293]
 gi|228585161|gb|EEK43272.1| Arginine transport system permease protein artQ [Bacillus cereus
           m1293]
 gi|228642677|gb|EEK98963.1| Arginine transport system permease protein artQ [Bacillus cereus
           BDRD-ST26]
          Length = 222

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 16  PYILKGLEVTLKIVAVSALAGFLLGTLLALCKIARIRALNIAA-------DLYTSIFRGT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 69  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 119 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 179 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 222



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   ++GTL+   +++  + +     +Y  +F
Sbjct: 6   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFLLGTLLALCKIARIRALNIAADLYTSIF 65

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 66  RGTPLVLQLMIIYFGVPQI 84


>gi|148986052|ref|ZP_01819073.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147921886|gb|EDK73012.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
          Length = 227

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTILISICVIFLGTILGVVL-AFGQCSKFKPLVWLANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 227



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTILISICVIFLGTILGVVLAFGQCSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|299541805|ref|ZP_07052128.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725543|gb|EFI66184.1| amino acid ABC transporter ATP-binding protein [Lysinibacillus
           fusiformis ZC1]
          Length = 221

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 112/219 (51%), Gaps = 15/219 (6%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               M    ++ V S +LGI++ L    L +  + K  + +  +Y+  +L+ G P +V I
Sbjct: 18  FFKAMLLTLELTVVSILLGIIIGLV-FALLKISNIKILELISDIYV--YLVRGTPLIVQI 74

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + Y              I G  + P+F +  +AL+ +  A+I+EI+R  + +V  GQ E
Sbjct: 75  FILY------------FGISGIFLLPDFWAASLALALHNGAYISEILRGAIQSVDNGQFE 122

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A  +LG+T     R ++LPQA R  +PPL +Q++  LK+SSLA  +   +L +V  T+ +
Sbjct: 123 AGRSLGMTKTLTLRRIILPQAFRRALPPLGNQFIISLKDSSLAAFISMNELFNVATTLGS 182

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +  +LI    YL L  ++   +NR   K+A+ ++
Sbjct: 183 NNFDEMTYLLIVAVYYLLLVALMTFVVNRTELKLAVSDR 221



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
                 + T  L    ++   IIG +    ++S  K++  I  +YV + R  P +V IF 
Sbjct: 17  VFFKAMLLTLELTVVSILLGIIIGLVFALLKISNIKILELISDIYVYLVRGTPLIVQIFI 76

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           LY  +  +  +PD           N   +
Sbjct: 77  LYFGISGIFLLPDFWAASLALALHNGAYI 105


>gi|229843882|ref|ZP_04464023.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 6P18H1]
 gi|229812876|gb|EEP48564.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 6P18H1]
          Length = 238

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP                   +    T+      F    ++ +++++  T
Sbjct: 1   MILLNNWLASLPFMSTERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             S +   K  +AL  +YIS  +I G P LV I + +   +  P +       G T+ P 
Sbjct: 61  LPSPNLPLKLLQALCRVYIS--IIRGTPMLVQIFIIF---YGLPEV-------GITLEP- 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+A    ++PQA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQAFIRTIMPQALRISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +++ +K++SLA  V   +L  V   I     + I I      IY     +++   
Sbjct: 168 SLSNTFISTVKDTSLASLVLVTELFRVAQNITAANYEFILIYSEAALIYWIFCFVLSFLQ 227

Query: 386 NRLNAKIAL 394
           +RL  + + 
Sbjct: 228 DRLEIRFSR 236



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFR 137
           SS+   +    + T  LA        +I  +V   R   +      L+  +CRVY+ + R
Sbjct: 24  SSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYISIIR 83

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             P LV IF ++  +  V    +          +N    +  T+     A 
Sbjct: 84  GTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAI 134


>gi|227551337|ref|ZP_03981386.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257896043|ref|ZP_05675696.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|293378785|ref|ZP_06624942.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|227179548|gb|EEI60520.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257832608|gb|EEV59029.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|292642578|gb|EFF60731.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 215

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 16/223 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH---EKTGKALPLLYISTFLIFGL 232
           +           KI +FS VL +V SL    L   F     K   AL   Y+  F    L
Sbjct: 5   IQTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKIVSALAKAYVEFFRNIPL 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +V+        +    +  FN  G       F +  I L+ YT+AFIAE VRSG+  V
Sbjct: 65  LIIVMFF------YVVVPIYWFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTV 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA ++ G T+ +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+  
Sbjct: 112 PKGQTEAGLSSGFTYPEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQ 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  I ++T    +  +I    YL +++ ++  M  L  K A++
Sbjct: 172 GDLIASETFNTFDTYIIVGLFYLVITLPLSYLMVYLEKKWAVR 214



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 46/94 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    + GF  T + +   ++ + IIGTL+   +LS NK+V+ + + YVE FRNIP L
Sbjct: 6   QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKIVSALAKAYVEFFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +++ F Y  V       D       G+ +     
Sbjct: 66  IIVMFFYVVVPIYWFNLDGFQAGTIGLTIYTSAF 99


>gi|118444293|ref|YP_878646.1| amino acid ABC transporter, permease component [Clostridium novyi
           NT]
 gi|118134749|gb|ABK61793.1| amino acid ABC transporter, permease component [Clostridium novyi
           NT]
          Length = 215

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 106/222 (47%), Gaps = 14/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           ++ V S +LG  + +    L +  + K    +   Y  T++  G P
Sbjct: 8   NMLPVLLKGSVITIELTVISVILGSFIGVIVAGL-KLSNNKIIVYIISFY--TWIFRGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             + +   Y             F+G S      ++  I LS  + A+++EI+R G+I++ 
Sbjct: 65  MFLQLFFFYY---------GLPFLGISL--TPMVAAIIGLSLNSGAYMSEIIRGGIISID 113

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA  ALG T+ +    V+LPQA R I+P + ++++ +LK++SL  A+   +L+   
Sbjct: 114 KGQFEACKALGFTNIQTMTKVILPQAFRVILPSVGNEFITMLKDTSLVSAITMEELMRNA 173

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              ++ TG+ +E  L+   +YL ++ +  +  +    ++++ 
Sbjct: 174 QLQMSSTGRPVEPFLMAGLLYLLMTTVFNIIFSLTEKRLSVY 215


>gi|229009851|ref|ZP_04167071.1| Amino acid ABC transproter, permease [Bacillus mycoides DSM 2048]
 gi|228751469|gb|EEM01275.1| Amino acid ABC transproter, permease [Bacillus mycoides DSM 2048]
          Length = 230

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSIIVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL+L ++    ++ L
Sbjct: 147 NQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|254459832|ref|ZP_05073248.1| ABC-type glutamine transport system, permease component
           [Rhodobacterales bacterium HTCC2083]
 gi|206676421|gb|EDZ40908.1| ABC-type glutamine transport system, permease component
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 255

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 114/256 (44%), Gaps = 12/256 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++      +              P G       L+    T+  +      S ++G++++L
Sbjct: 12  LIFLVGCNAAPGTWGWYVIDPRTPAGYNNIRFLLNGFGATILLSVIAAAMSMIIGMLVAL 71

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                +R     +             I  +  + L+ + + + +  PV+     +G +  
Sbjct: 72  PGMSSNRWIRLPS----------RIYIEFVRAIPLLPMLFWVFYGLPVV--LKSMGINIS 119

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F    I L+   +AF AEI RSG+ ++ +GQ EAA  +GL + +  R V+LPQA+R 
Sbjct: 120 IDAFWGAIITLAISDSAFTAEIYRSGIQSIAKGQTEAAKTVGLNYTQTMRYVILPQAIRR 179

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PPL +Q++ ++K S+ A  +G  +L      ++    + +EI  + +  YL L ++I+
Sbjct: 180 ILPPLANQFIYIVKMSAFASVIGMQELTRRANELVVTEYRPLEIYTLLILEYLVLVLIIS 239

Query: 383 LFMNRLNAKIALKEKK 398
            F+  L  K+   E +
Sbjct: 240 FFVRWLERKMGSDESR 255



 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L GF  T  L+      + IIG LV    +S+N+ +    R+Y+E  R IP L ++F
Sbjct: 42  RFLLNGFGATILLSVIAAAMSMIIGMLVALPGMSSNRWIRLPSRIYIEFVRAIPLLPMLF 101

Query: 147 FLYKSVL 153
           +++  + 
Sbjct: 102 WVFYGLP 108


>gi|238024355|ref|YP_002908587.1| polar amino acid family ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237879020|gb|ACR31352.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 218

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 18/229 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
               +      L    LT+       V S +LG+V +L   ++SRH   +   A      
Sbjct: 3   WSDIVEFVPILLQGAGLTVFITISCLVLSTMLGLVWALL--KMSRHAPVRRAAAT----- 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI  +  L +I L + ++F  P +                +  + L+   + ++AEI
Sbjct: 56  ---LINVVRGLPMIVLLFYIYFVLPSI--------GLQMSALQASIVGLAFGYSTYVAEI 104

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ +V  GQ EAA ++G+   K    V+LPQA++  +PP ++  +++LK+SSLA  +
Sbjct: 105 IRSGIESVDPGQYEAAQSIGMGRVKTMTRVILPQAIKVALPPYSNTLVSMLKDSSLASTI 164

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +++   G  I   T Q +E+  +    YL++S+ +      L  +  
Sbjct: 165 TVSEMTRQGSLIAAATFQNLEVYTLVAIGYLAMSLPLMSLTKALERRFG 213


>gi|170758854|ref|YP_001786802.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169405843|gb|ACA54254.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 219

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 13/227 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     +  R L F         KI + SF++ I L+     L  +   K    +   Y+
Sbjct: 1   MELNFDIIFRNLPFLLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ +   Y                        ++  I L+   AA+++EI
Sbjct: 61  EIF--RGSPLLIQLFFIYY-----------GLPSVGIAMDAEVAAVIGLALNGAAYMSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I++ RGQ EA  +LG T  +    ++LPQA++  +PPL + + +LLK++SL   +
Sbjct: 108 IRAAIISIDRGQEEAGFSLGYTRLQNLYYIILPQAVKISVPPLVNGFSSLLKDTSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L   G  I ++T +  E+ L     Y  L+ M+++    +  +
Sbjct: 168 SITELTRSGNLIYSRTARPFEVYLTLGLFYFVLTYMVSICSKFIEKR 214



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           +L   + T  +     I A  +  +VG  R     K++  I   YVE+FR  P L+ +FF
Sbjct: 15  LLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIFRGSPLLIQLFF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +Y  + SV    D  +    G+ LN     
Sbjct: 75  IYYGLPSVGIAMDAEVAAVIGLALNGAAYM 104


>gi|58336907|ref|YP_193492.1| glutamine ABC transporter permease [Lactobacillus acidophilus NCFM]
 gi|227903465|ref|ZP_04021270.1| glutamine ABC superfamily ATP binding cassette transporter permease
           [Lactobacillus acidophilus ATCC 4796]
 gi|58254224|gb|AAV42461.1| glutamine ABC transporter permease [Lactobacillus acidophilus NCFM]
 gi|227868785|gb|EEJ76206.1| glutamine ABC superfamily ATP binding cassette transporter permease
           [Lactobacillus acidophilus ATCC 4796]
          Length = 213

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+  +    +FS +LG+V +L           K G+ +  +YI  F    
Sbjct: 9   WGSFLTGFWNTILCSIIALIFSLILGVVFALLEVA-----PPKFGRVIAKIYIEVF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ + Y +                     F +  I L+ YT+AFIAE VRSG+ +
Sbjct: 62  IPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGLTLYTSAFIAETVRSGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A++ G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 IGEGQMEGALSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I   T + I+  +I    YL L++ ++ +M  L  K+A
Sbjct: 171 QAQLIAFSTFRTIDTYIIVGLFYLILTMPLSYYMRHLEKKMA 212



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 39/91 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + L GF NT   +   +I + I+G +     ++  K    I ++Y+EVFRNIP LV++
Sbjct: 9   WGSFLTGFWNTILCSIIALIFSLILGVVFALLEVAPPKFGRVIAKIYIEVFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
              Y  V   +           G+ L     
Sbjct: 69  MIFYLIVPRYIVKLSGFQAGTIGLTLYTSAF 99


>gi|330875464|gb|EGH09613.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 324

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    +     L   V S+   P     +    F +   L   + T+       VFS VL
Sbjct: 42  RWAGSIFAALVLVAIVHSLATNPRWEWGVFGQWFFSPSVLRGLSQTLLLTLLSTVFSIVL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G  L+L     +R        AL   YI  F       +++I   +   +D  VL     
Sbjct: 102 GTALAL-----ARLSRSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLAVPFT 156

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 DLVFAEWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 VFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTVLTSAQYYVERHFARGTAR 304



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + ++GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLSQTLLLTLLSTVFSIVLGTALALARLSRSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|307299245|ref|ZP_07579046.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915041|gb|EFN45427.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 244

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 108/251 (43%), Gaps = 15/251 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +  + L        S V PF      +        + T  ++ V +  L +++ + 
Sbjct: 8   ITLGIIVAGLLWFSYSSVSAVYPFNWSTLTKYYKLFLDGIMTTLQLSVIALALAVIVGI- 66

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A  L+R       +    LY+  F    +P LV+I L Y               G +   
Sbjct: 67  AVALARDSKVNLFRDAGTLYVWFF--RNMPLLVVILLVYYGF------------GSAVNV 112

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F +  I+LS +  A++ EI R+G+ AVP G+ EA  A+GL   +    ++ PQA R  
Sbjct: 113 DRFWAGVISLSLFEGAYVGEIFRAGIDAVPSGEKEAGEAMGLYRSQIMFSIVFPQAFRIS 172

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL  Q + L+K+SSL   +   DL      +  QT    E  ++    YL ++ +++L
Sbjct: 173 IPPLIGQLVTLIKDSSLVSVIALGDLTMKARQVGTQTLAVFEAYIVLAACYLVMTSLVSL 232

Query: 384 FMNRLNAKIAL 394
               L  ++A+
Sbjct: 233 VGRILERRLAI 243



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 35/80 (43%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
              +++ + Y    L G + T  L+   +  A I+G  V   R S   L      +YV  
Sbjct: 30  PFNWSTLTKYYKLFLDGIMTTLQLSVIALALAVIVGIAVALARDSKVNLFRDAGTLYVWF 89

Query: 136 FRNIPPLVVIFFLYKSVLSV 155
           FRN+P LVVI  +Y    S 
Sbjct: 90  FRNMPLLVVILLVYYGFGSA 109


>gi|229170389|ref|ZP_04298062.1| Amino acid ABC transproter, permease [Bacillus cereus AH621]
 gi|228613086|gb|EEK70238.1| Amino acid ABC transproter, permease [Bacillus cereus AH621]
          Length = 230

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKILNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSIIVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL+L ++    ++ L
Sbjct: 147 NQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|209515705|ref|ZP_03264569.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503941|gb|EEA03933.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 219

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L           K  + S + G+V       L    H +    +  +Y+S  ++ G P
Sbjct: 9   QSLPVLAQGALLTIKFAILSMIFGLVGGAVL-ALMGISHSRPLNWIARVYVS--VMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y                         +  IALS   AA+++E +R  ++ + 
Sbjct: 66  LLVQIFVIYY-----------GLPSFGISLDPTPAGVIALSANVAAYLSESMRGAILGIH 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ  A+ +LGL+ R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 115 QGQWLASYSLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSA 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             II  T Q + + L    +Y  L  ++         +++L  + 
Sbjct: 175 QEIIASTYQPLPLYLAAAAVYWVLCQVLEWAQRWYERRLSLPTRH 219



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + T   A   MI   + G ++    +S ++ + WI RVYV V R  P LV IF 
Sbjct: 13  VLAQGALLTIKFAILSMIFGLVGGAVLALMGISHSRPLNWIARVYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  + S   
Sbjct: 73  IYYGLPSFGI 82


>gi|163791026|ref|ZP_02185447.1| putative ABC-type amino-acid transporter permease protein
           [Carnobacterium sp. AT7]
 gi|159873671|gb|EDP67754.1| putative ABC-type amino-acid transporter permease protein
           [Carnobacterium sp. AT7]
          Length = 236

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 18/239 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P             +   S    T+         S V+G+++ + +T           +
Sbjct: 5   NPFALWRWEDLFQNFDHFGSGFLRTLQVAILALALSLVIGVIIGILSTA-----QNVILR 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           ++  +Y+  F    +P ++ I   Y                   V  EFM   I +  Y 
Sbjct: 60  SIARVYVEIF--QNIPLVIQIFFMYN-----------GLAMAGLVLSEFMIGVIGVGLYH 106

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+I E+VR+G++++P+GQ EAA + G  + +  R V+LPQ ++SI+PPLT+Q +NL+KN
Sbjct: 107 GAYIGEVVRAGILSIPKGQQEAAYSQGFNYTQTMRYVILPQMVKSILPPLTNQAVNLIKN 166

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +S+   +  ADL+    +  + +       ++   +Y  L   +A F  +   K+   +
Sbjct: 167 TSVLAIIAGADLMYAADSYASSSLNYGTSYVVAGLLYFMLCFPLATFSRKYEEKLKKND 225



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 45/85 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  +A   +  + +IG ++G    + N ++  I RVYVE+F+NIP ++ IFF+
Sbjct: 22  FGSGFLRTLQVAILALALSLVIGVIIGILSTAQNVILRSIARVYVEIFQNIPLVIQIFFM 81

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +    ++   G+ L +
Sbjct: 82  YNGLAMAGLVLSEFMIGVIGVGLYH 106


>gi|154497089|ref|ZP_02035785.1| hypothetical protein BACCAP_01382 [Bacteroides capillosus ATCC
           29799]
 gi|150273488|gb|EDN00616.1| hypothetical protein BACCAP_01382 [Bacteroides capillosus ATCC
           29799]
          Length = 182

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 48/197 (24%), Positives = 97/197 (49%), Gaps = 17/197 (8%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L   RLSRH   +  +     YI   +I G+P +V + + Y            N +  + 
Sbjct: 3   LCLMRLSRH---RILRGPATAYID--IIRGIPVVVQLLIMY------------NVVLLNV 45

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              + +   IA    ++A++AEI RSG+ AV  GQMEA  +LGL+  +    ++ PQA++
Sbjct: 46  TDNKTLVAIIAFGLNSSAYMAEIYRSGINAVDPGQMEAGRSLGLSRAQTMWHIIFPQAIK 105

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           + +P  TS+++ L+K +++   +   DL  V  ++ + T  A   + I    Y +++  +
Sbjct: 106 NCLPTYTSEFIVLVKETAVVGYIALVDLTKVYSSVQSLTYDAAAPLFIIAVAYFAITKTL 165

Query: 382 ALFMNRLNAKIALKEKK 398
           ++    +  ++   +++
Sbjct: 166 SIIFGYMERRLRESDRR 182


>gi|226311780|ref|YP_002771674.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226094728|dbj|BAH43170.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 221

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 15/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R L F    +    ++ + S ++G ++ LF   L +       + +   YI   +I G 
Sbjct: 12  FRTLPFFWKPLLLTFQLTIASVIVGSIIGLFV-ALLKVSKLPVARFIANAYIM--IIRGT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + Y   +    LGQ            F S  +AL+ ++ A+IAEI R  + ++
Sbjct: 69  PLVVQIFVLYFGFYKVIDLGQ------------FWSAALALAIHSGAYIAEIFRGSIQSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEA ++LG++ R+  R ++LPQAM+  IPPL +Q++  LK SSLA  +   +L S+
Sbjct: 117 DKGQMEAGLSLGMSARQTMRRIILPQAMKRSIPPLGNQFILSLKESSLAAFIAMDELFSL 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T   +   LI    YL + +     ++ +  ++A  E
Sbjct: 177 ARRLSAETFDEMTYFLIVALYYLVIVMAFTFVVHIMEKRLAKGE 220



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                + TF L  + +I  +IIG  V   ++S   +  +I   Y+ + R  P +V IF L
Sbjct: 18  FWKPLLLTFQLTIASVIVGSIIGLFVALLKVSKLPVARFIANAYIMIIRGTPLVVQIFVL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y     V+ +             +   +
Sbjct: 78  YFGFYKVIDLGQFWSAALALAIHSGAYI 105


>gi|167837542|ref|ZP_02464425.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia thailandensis MSMB43]
          Length = 219

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V + VLG+++ L    + R    +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAVLTMKFAVAAMVLGLIVGLVV-AIVRIGDNRFLCAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G ++ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDI----------GISLDPT-AAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY +LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWALSTLLARLQGRIETRCAL 215



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 39/85 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A + M+   I+G +V   R+  N+ +  I + YV + R  P LV +F 
Sbjct: 13  VLAKGAVLTMKFAVAAMVLGLIVGLVVAIVRIGDNRFLCAIAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDIGISLDPTAAGIFTLTLN 97


>gi|126649373|ref|ZP_01721614.1| amino acid ABC transporter (permease) [Bacillus sp. B14905]
 gi|126593698|gb|EAZ87621.1| amino acid ABC transporter (permease) [Bacillus sp. B14905]
          Length = 252

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +   +K       LY+  F   G P LV I L +             ++         +S
Sbjct: 65  KLSSKKWIYWPSKLYVDLF--RGTPMLVQILLIHLAVIPTIFGHSLGYM---------VS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL    AA+ AEI R+G+ ++ +GQMEAA +LGLTH +A R V+LPQA R +IPPL 
Sbjct: 114 GITALILNCAAYNAEIFRAGIQSIAKGQMEAARSLGLTHNQAMRKVILPQAFRRMIPPLG 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ LLK+SSL   +   D++     +   + +  E  ++   +YL L+  +   +  +
Sbjct: 174 NEFIALLKDSSLVTVIAAPDILYASKVVAGASFRFWEPYIVAALLYLILTYGVTKIVAFI 233

Query: 389 NAKIA 393
             + +
Sbjct: 234 EKRFS 238



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 44/85 (51%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF +D   + +    +Y    + G   T  L  SG     ++G  +G G+LS+ K + W 
Sbjct: 16  GFRMDIFDLRWDIVWNYRDMFIRGIGVTLILTLSGYFGGILLGLFLGLGKLSSKKWIYWP 75

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVL 153
            ++YV++FR  P LV I  ++ +V+
Sbjct: 76  SKLYVDLFRGTPMLVQILLIHLAVI 100


>gi|145632443|ref|ZP_01788178.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 3655]
 gi|145634237|ref|ZP_01789948.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittAA]
 gi|229846111|ref|ZP_04466223.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 7P49H1]
 gi|144987350|gb|EDJ93880.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 3655]
 gi|145268681|gb|EDK08674.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae PittAA]
 gi|229811115|gb|EEP46832.1| ABC-type amino acid transport system permease component
           [Haemophilus influenzae 7P49H1]
          Length = 238

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP                   +    T+      F    ++ +++++  T
Sbjct: 1   MILLNNWLASLPFMSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             S +   K  +AL  +YIS  +I G P LV I + +   +  P +       G T+ P 
Sbjct: 61  LPSPNLPLKLLQALCRVYIS--IIRGTPMLVQIFIIF---YGLPEV-------GITLEP- 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +R+A    ++PQA+R  +P
Sbjct: 108 FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEASYAIGMNYRQAFIRTIMPQALRISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +++ +K++SLA  V   +L  V   I     + I I      IY     +++   
Sbjct: 168 SLSNTFISTVKDTSLASLVLVTELFRVAQNITAANYEFILIYSEAALIYWIFCFVLSFLQ 227

Query: 386 NRLNAKIAL 394
           +RL  + + 
Sbjct: 228 DRLEIRFSR 236



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFR 137
           SS+   +    + T  LA        +I  +V   R   +      L+  +CRVY+ + R
Sbjct: 24  SSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYISIIR 83

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             P LV IF ++  +  V    +          +N    +  T+     A 
Sbjct: 84  GTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAI 134


>gi|320450573|ref|YP_004202669.1| amino acid ABC transporter permease [Thermus scotoductus SA-01]
 gi|320150742|gb|ADW22120.1| amino acid ABC transporter, permease protein [Thermus scotoductus
           SA-01]
          Length = 258

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 10/213 (4%)

Query: 187 AKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            K+ + S + G+V+ +FA   RLSR    +   +        ++  G P LV I   Y  
Sbjct: 54  LKLTLISSLAGLVIGVFAGMFRLSRRLWVRLPASF-----YIWVTRGTPLLVQILFAYN- 107

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P+L Q  +     V   + + +IALS    A+ AE+VR+G+ A+P+GQ EAA +LG
Sbjct: 108 --ALPLLLQPLWPEAQQVLTPYWAAFIALSFNVGAYNAEVVRAGIQAIPKGQWEAAWSLG 165

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     R V+LPQA+R ++PPL +  + LLK+SSLA  +   +L   G  II+ T + +
Sbjct: 166 LSPADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVIALTELALSGQRIISATFRPV 225

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E+ L    IYL L+ ++  F N L  ++ +  +
Sbjct: 226 EVYLAVAAIYLLLTTVLTFFTNLLERRLQVAGR 258



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 32/92 (34%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
              +S   A+ +G   T  L     +   +IG   G  RLS    V      Y+ V R  
Sbjct: 37  DRAASAGQAMALGAEITLKLTLISSLAGLVIGVFAGMFRLSRRLWVRLPASFYIWVTRGT 96

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           P LV I F Y ++  +L             + 
Sbjct: 97  PLLVQILFAYNALPLLLQPLWPEAQQVLTPYW 128


>gi|330826100|ref|YP_004389403.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|329311472|gb|AEB85887.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 221

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 97/233 (41%), Gaps = 14/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L           ++ V SF+L   + L    L +    +         I
Sbjct: 1   MQAFLQHAREFLPILLQGAVVTVQVTVLSFLLSSAIGLVL-ALGKLSPVRAVSVCASTVI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I GLP +V +   Y           F           F +  I L    +A+ AE 
Sbjct: 60  N--VIRGLPIIVQLFYIY-----------FVLPDIGIQLSAFQAGVIGLGIAYSAYQAEN 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ AV  GQ EAA+A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +
Sbjct: 107 FRAGIEAVDPGQREAALAMGMRPALLMRRVILPQAFRIALPPYGNTLVMMLKDSSLISTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             A++   G  I + T Q + +  +   +YL++S+ +   + RL  +     K
Sbjct: 167 TVAEMTRAGQLIASSTFQNMTVYTLVALLYLAMSLPLVWSLRRLERRFGAGRK 219


>gi|304405414|ref|ZP_07387073.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304345453|gb|EFM11288.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 305

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 114/233 (48%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +    + +      ++    I   S +LG ++  F   L R ++    + +  +Y+S
Sbjct: 4   RFDIHYLWQFIPKLLGYLEITLFIVAASMLLGFLVG-FLIALPRMYNVPILRTVSRVYVS 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P L+ + L Y   +  P L +   +  S + P  + + +    +T AFI+E +
Sbjct: 63  FF--RGTPILIQLFLIY---YGLPELLKGVGVDVSKL-PVLVFVILTYGLHTGAFISETI 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AV RGQ EAA+A+G+T  ++   ++LPQA+   +P + +  +  LK++SLA ++G
Sbjct: 117 RAGVGAVDRGQTEAALAIGMTGYQSFLRIVLPQAVAVSMPVVANLVIANLKDTSLAFSLG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             ++     T+   T   IE+ +    IY ++S+++         ++   E +
Sbjct: 177 VMEMTGKSQTLGQATQHFIEVYIALSAIYFAVSMVLESLFKLAERRLLRHEAR 229



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 85  YATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           Y    +   +     T ++  + M+   ++G L+   R+    ++  + RVYV  FR  P
Sbjct: 9   YLWQFIPKLLGYLEITLFIVAASMLLGFLVGFLIALPRMYNVPILRTVSRVYVSFFRGTP 68

Query: 141 PLVVIFFLYKSVLSV 155
            L+ +F +Y  +  +
Sbjct: 69  ILIQLFLIYYGLPEL 83


>gi|228909989|ref|ZP_04073809.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis IBL 200]
 gi|228849506|gb|EEM94340.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis IBL 200]
          Length = 225

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 19  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 225



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++       IL G   T  +     +   I+GTL+   +++  + +      Y  +F
Sbjct: 9   LDFSAIMPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADFYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQI 87


>gi|222102871|ref|YP_002539910.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739472|gb|ACM40205.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 290

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 4/238 (1%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +  + +G              +    ++   + V GI        ++        KAL 
Sbjct: 44  RNQSVQWGEIPRYMVDPVILSGVVLTLQLTSGAMVFGIAFGCIVAVMA-TSQNIVLKALA 102

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           + ++  F   G+P +V I   + +    P V      I  + +    ++ ++AL  + AA
Sbjct: 103 IAFVWWF--RGVPLIVQIFFWFNIALFIPEVGIGSYSISINALVTPALAGFLALGLHEAA 160

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            ++EI+R GL AV RGQ EAA +LGL   +  R V+LPQA+R I+PP  +Q + +LK S+
Sbjct: 161 NMSEIIRGGLTAVDRGQREAASSLGLRPLQTLRTVVLPQAVRLIVPPTGNQAIGMLKASA 220

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +G  DL++    I  +    IE++ +    YL ++ + ++    L   +A K +
Sbjct: 221 IVSVIGMQDLLTQAQAIYARNFLVIELLCVASLWYLLITTLASIGQYFLEKHLAPKGR 278



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G V T  L    M+     G +V     S N ++  +   +V  FR +P +V IFF
Sbjct: 61  VILSGVVLTLQLTSGAMVFGIAFGCIVAVMATSQNIVLKALAIAFVWWFRGVPLIVQIFF 120

Query: 148 LYKSVL 153
            +   L
Sbjct: 121 WFNIAL 126


>gi|307941624|ref|ZP_07656979.1| glutamine transport system permease protein GlnP [Roseibium sp.
           TrichSKD4]
 gi|307775232|gb|EFO34438.1| glutamine transport system permease protein GlnP [Roseibium sp.
           TrichSKD4]
          Length = 265

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 115/221 (52%), Gaps = 14/221 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
                 F  +  LG+VL++       A R    F+ +  + LP+L +  ++ F    LV+
Sbjct: 52  FVTLVGFSLASALGLVLAVASLSRFLAVRQVARFYIEVVRGLPILVLLLYIAFVAAPLVI 111

Query: 238 IALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
             +   +       L   +F       P      +AL+   +AFIAE+ R+G+ AV +GQ
Sbjct: 112 ALINAIIEPLGMDPLRTRDF-------PLIWRAILALTIGYSAFIAEVFRAGIQAVDKGQ 164

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALG++     RL++ PQA+R+I+PPL + ++ ++K+SSL   +G AD+  +G   
Sbjct: 165 IEAAKALGMSGWLRFRLIVFPQALRTILPPLGNDFVAMIKDSSLVSVLGVADITQLGKVY 224

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              + +  E   +  FIYL++++ ++L + +   K  ++E+
Sbjct: 225 AAGSFRFFETYNVVAFIYLTMTVTLSLALRKFERKTRIEER 265



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 3/124 (2%)

Query: 81  SDSSYATAILV---GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           S+  Y     +   G   T ++   G   A+ +G ++    LS    V  + R Y+EV R
Sbjct: 32  SNDIYGQVFAIVAKGAGITIFVTLVGFSLASALGLVLAVASLSRFLAVRQVARFYIEVVR 91

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            +P LV++ ++      ++    ++I+ P GM                   I   +F+  
Sbjct: 92  GLPILVLLLYIAFVAAPLVIALINAIIEPLGMDPLRTRDFPLIWRAILALTIGYSAFIAE 151

Query: 198 IVLS 201
           +  +
Sbjct: 152 VFRA 155


>gi|295092287|emb|CBK78394.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Clostridium cf.
           saccharolyticum K10]
          Length = 214

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 115/213 (53%), Gaps = 11/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  I +   +LG +L++      +    +   AL  +Y+   ++ G P L+ +   Y  
Sbjct: 13  LSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNALAGIYVE--IVRGTPMLLQL---YFF 67

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+         S      +   +AL   +AA+++E++RSG+ AV +GQMEAA +LG
Sbjct: 68  YFMLPMAFP------SMNLSPIVCCAVALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLG 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L HR+A   V+LPQA+++I+P L ++++ ++K++SLA      +L++V  T+      ++
Sbjct: 122 LNHRQAMVKVILPQAIKNIMPALGNEFVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSL 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E ++I   IY  ++  ++  +N +  ++   E+
Sbjct: 182 EPLIIVGCIYFIVTFSLSKGINFMERRMRANER 214



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAWICRVYVEVFRNIPPLV 143
            + G   T  L+   +I  T++G L+   RLS       + +  +  +YVE+ R  P L+
Sbjct: 3   FMQGLGVTLLLSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNALAGIYVEIVRGTPMLL 62

Query: 144 VIFFLYKSVLSVLPIPD 160
            ++F Y  +    P  +
Sbjct: 63  QLYFFYFMLPMAFPSMN 79


>gi|330957236|gb|EGH57496.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 229

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 5/220 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAI-PMGIARASRHWPVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y        + Q        +   F    I ++ +TAA+IAEI+R  + AVP 
Sbjct: 66  LVQLFLVYYGLAQFDAVRQGPL--WPYLRDPFWCAVITMTLHTAAYIAEILRGAIQAVPV 123

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  
Sbjct: 124 GEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMAR 183

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           TII +T   +EI       YL ++ ++      L   + +
Sbjct: 184 TIIARTYLPVEIFFAAGMFYLVMTFVLVQGFRLLEKLLRV 223



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAIPMGIARASRHWPVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 69  LFLVYYGLAQFD 80


>gi|291298120|ref|YP_003509398.1| polar amino acid ABC transporter inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
 gi|290567340|gb|ADD40305.1| polar amino acid ABC transporter, inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
          Length = 285

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 20/258 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V++F ++ +  + L     +  L    F     ++     + T A  +V  F LGI++++
Sbjct: 44  VILFVIFGADWADLSEKFFNAELIERSFPELFTVALANTVIYT-ASGYVVGFALGILIAV 102

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R       + +   +I  F       L+L  L +      P L       G   
Sbjct: 103 M-----RLSSAAVNRWIATGFIEIFRGLPA-LLILTFLAFFWPVAFPNLIIPGGNYG--- 153

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                ++ + L   +AA++AE  R+G+ AVP+GQMEAA +LG++H +A   ++LPQA+R 
Sbjct: 154 -----TVALGLGLCSAAYMAETFRAGIQAVPKGQMEAARSLGMSHTRAMVTIILPQAVRI 208

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +IPPLT++ + L K+SSL + VG A    DLV  G  + N+TG +   +++    +L ++
Sbjct: 209 VIPPLTNELILLTKDSSLVLTVGIAAKESDLVKFGNDLANETGNSTP-LVVAGLAFLVIT 267

Query: 379 IMIALFMNRLNAKIALKE 396
           I +++ + RL A+ A   
Sbjct: 268 IPLSILVRRLEARQAKAR 285



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             V   NT     SG +    +G L+   RLS+  +  WI   ++E+FR +P L+++ FL
Sbjct: 75  FTVALANTVIYTASGYVVGFALGILIAVMRLSSAAVNRWIATGFIEIFRGLPALLILTFL 134

Query: 149 YKSVLSVLPI 158
                   P 
Sbjct: 135 AFFWPVAFPN 144


>gi|283833087|ref|ZP_06352828.1| amino acid ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
 gi|291070707|gb|EFE08816.1| amino acid ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
          Length = 308

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 122/269 (45%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +  ++ +F +   + SV   P     +    F +   LS    T+       + S +
Sbjct: 16  MRTVGAVIALFVMAVIIQSVAFNPRWEWGVFARWFFDPVILSGLGQTLLLTLIGTLLSII 75

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
           +G +L+L     +R         L   YI  F    L  ++++   +   +D   +    
Sbjct: 76  IGGLLAL-----ARLSSSWLLNGLAWGYIWLFRSLPLIVVLIVLYNFSYLYDTLTIGIPF 130

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q+       V  +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   +
Sbjct: 131 TPIQWGSFETINVLGQFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWR 190

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            T  ++LPQA+R+I+P   ++ ++L K +++   +   +L      I N+T + I ++++
Sbjct: 191 RTLRIILPQALRTILPAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMV 250

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ +++L  + +   +A  E++
Sbjct: 251 GAVWYLVITSVLSLIQHIVERALARSERR 279



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           + IIG L+   RLS++ L+  +   Y+ +FR++P +VV+  LY 
Sbjct: 73  SIIIGGLLALARLSSSWLLNGLAWGYIWLFRSLPLIVVLIVLYN 116


>gi|257887549|ref|ZP_05667202.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257823603|gb|EEV50535.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
          Length = 215

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 10/220 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +           KI +FS VL +V SL    L   F     K +  L  +    F    L
Sbjct: 5   IQTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSTLAKAYVEFFRNIPL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I + + +      +  FN  G       F +  I L+ YT+AFIAE VRSG+  VP+G
Sbjct: 65  LIIVMFFYVVVP---IYWFNLDG-------FQAGTIGLTIYTSAFIAETVRSGIQTVPKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA ++ G T+ +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+  G  
Sbjct: 115 QTEAGLSSGFTYSEIMRYIVLPQAFKIVIPPLGNQFINLVKNSSILAIVAGLDLMYQGDL 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I ++T    +  +I    YL +++ ++  M  L  K A++
Sbjct: 175 IASETFNTFDTYIIVGLFYLVITLPLSYLMVYLEKKWAVR 214



 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 46/94 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    + GF  T + +   ++ + IIGTL+   +LS NK+V+ + + YVE FRNIP L
Sbjct: 6   QTYGPIFVDGFKITLFSSVLALVFSLIIGTLMAIFQLSKNKVVSTLAKAYVEFFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +++ F Y  V       D       G+ +     
Sbjct: 66  IIVMFFYVVVPIYWFNLDGFQAGTIGLTIYTSAF 99


>gi|239833590|ref|ZP_04681918.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821653|gb|EEQ93222.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 335

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 15/268 (5%)

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I        R  P    I  ++  +  +L I  +S  L F  F+  +     +  + T  
Sbjct: 80  IIFANWSFLRLFPRWAQIIAIWTELFLLLMIFFYSFNLSF-EFIARKVGFLISQGVVTTL 138

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            I   S     VL+L    +++         L   Y S F   GLP L+ I   Y ++  
Sbjct: 139 YISTASIFFATVLALIG-AVAKLSKNGLVYGLATFYTSLF--RGLPLLMQI---YIIYLG 192

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +          V     +  +ALS    A++ EI R+G+ ++PRGQ E A ALGL  
Sbjct: 193 LPQV--------GYVIGPIPAGILALSLCYGAYMTEIFRAGIESIPRGQQEGAAALGLGP 244

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +   LV+LPQAMR IIPP  +Q++ +LK+SSL   +G  +L+ +  T      + IE++
Sbjct: 245 SQTMWLVILPQAMRIIIPPTGNQFIAMLKDSSLVSVIGVWELMYLARTQGQTEFRHIEML 304

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +    IY +LS+++     +L A+    
Sbjct: 305 ITASMIYWALSVVLEYGQAKLEARFKRS 332



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 28/143 (19%)

Query: 13  FSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEI 72
           F+   FL         + I   L L ++  +   N+              F++ + GF I
Sbjct: 82  FANWSFLRLFPRWAQIIAIWTELFLLLMIFFYSFNL-----------SFEFIARKVGFLI 130

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q                 G V T +++ + +  AT++  +    +LS N LV  +   Y
Sbjct: 131 SQ-----------------GVVTTLYISTASIFFATVLALIGAVAKLSKNGLVYGLATFY 173

Query: 133 VEVFRNIPPLVVIFFLYKSVLSV 155
             +FR +P L+ I+ +Y  +  V
Sbjct: 174 TSLFRGLPLLMQIYIIYLGLPQV 196


>gi|228922903|ref|ZP_04086200.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228836759|gb|EEM82103.1| Arginine transport system permease protein artQ [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 225

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 19  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIVRIRALNIAA-------DFYTSIFRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 72  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 122 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 182 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 225



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   ++   + +      Y  +F
Sbjct: 9   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIVRIRALNIAADFYTSIF 68

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 69  RGTPLVLQLMIIYFGVPQI 87


>gi|118464237|ref|YP_879359.1| amino acid ABC transporter permease [Mycobacterium avium 104]
 gi|118165524|gb|ABK66421.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium avium 104]
          Length = 598

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 20/216 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V   VLG+VL++     +   H +  +    +Y   F   GLP +V        
Sbjct: 380 LTFSASVIGLVLGMVLAV-----AGISHARWLRWPARVYTDVF--RGLPEVV-------- 424

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 LG    +GG T +  +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG
Sbjct: 425 IILLIGLGIGPIVGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALG 484

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQT 360
            ++  A RLV++PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  +T
Sbjct: 485 FSYATAMRLVVVPQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAET 544

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  +  ++     YL L++ +   +N ++A++    
Sbjct: 545 GN-LSPLVAAGACYLILTVPLTHLVNMIDARLRRGR 579



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 12/151 (7%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  L FS  +   ++G ++    +S  + + W  RVY +VFR +P +V+I  +   
Sbjct: 373 GLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVVIILLIGLG 432

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRG------------LSFPTLTMDTNAKIFVFSFVLGIV 199
           +  ++    ++   P G+                  +          ++   FS+   + 
Sbjct: 433 IGPIVGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMR 492

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           L +    + R       + + LL  S  + F
Sbjct: 493 LVVVPQGVRRVLPALVNQFIALLKASALVYF 523


>gi|194017220|ref|ZP_03055832.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
 gi|194011088|gb|EDW20658.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
          Length = 217

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 20/235 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVF--SFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +L F + + N  L          A +     SF++G ++++      R          PL
Sbjct: 1   MLRFSILIENFHLYVEGFKYTIGASVIALIGSFLIGTLIAIMRIAPLR----------PL 50

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++ T  +  +  + L+ + +   F  PVL          V+  F +  IAL+ YT+AFI
Sbjct: 51  NWLGTAYVEFVRNIPLLLITFVFFFGLPVL--------GIVADGFTAGTIALAIYTSAFI 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+G+ AVP GQMEAA A GL++    R ++LPQA++ +IPPL +Q++NL+KNSS+ 
Sbjct: 103 AEAIRAGIQAVPLGQMEAARASGLSYGGTMRYIILPQAIKIVIPPLGNQFINLVKNSSIL 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   DL+  G  I ++T    ++ +     YL L+I ++L +  L  ++A   
Sbjct: 163 GVIAGFDLMYQGDLIASRTFVTFDVYIFVAMFYLLLTIPLSLGVGYLEKRLARSH 217



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T   +   +I + +IGTL+   R++  + + W+   YVE  RNIP L++ F  +  
Sbjct: 17  GFKYTIGASVIALIGSFLIGTLIAIMRIAPLRPLNWLGTAYVEFVRNIPLLLITFVFFFG 76

Query: 152 VL 153
           + 
Sbjct: 77  LP 78


>gi|160942992|ref|ZP_02090230.1| hypothetical protein FAEPRAM212_00469 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445686|gb|EDP22689.1| hypothetical protein FAEPRAM212_00469 [Faecalibacterium prausnitzii
           M21/2]
          Length = 254

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 17/230 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA----TRLSRHFHEKTGKALPLLYISTF 227
             + ++    T+   A       VLG V++L       +   H +   G    +  + T 
Sbjct: 38  WMQYINGVGTTLLVTALALALGVVLGSVVALVRVTHDQQRPGHKNAVLGFFNAVCQVYTT 97

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P +V + +   + F             S      M   + L   + A+++EI+R 
Sbjct: 98  IIRGTPMMVQLLIMSMVIF-------------SNSRNFTMVGALTLGINSGAYVSEIIRG 144

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL+AV  GQMEA  +LGL +     ++++PQA+R+++P L ++++ LLK++SL   +G  
Sbjct: 145 GLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPALGNEFIVLLKDTSLITTIGGK 204

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L+     I+N+T +A+  +L    IYL L ++    +++   ++A  ++
Sbjct: 205 ELLYAAQGIMNRTYEAMFPLLGVALIYLILVMLFTWLLSKFERRLAQSDR 254


>gi|30264228|ref|NP_846605.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47529671|ref|YP_021020.1| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|47568216|ref|ZP_00238920.1| MW1799 [Bacillus cereus G9241]
 gi|49187056|ref|YP_030308.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|49480913|ref|YP_038216.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52141345|ref|YP_085484.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|65321542|ref|ZP_00394501.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
 gi|190565774|ref|ZP_03018693.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196034913|ref|ZP_03102320.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|196047222|ref|ZP_03114438.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218905289|ref|YP_002453123.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|225866135|ref|YP_002751513.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|227816929|ref|YP_002816938.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|229163089|ref|ZP_04291045.1| Arginine transport system permease protein artQ [Bacillus cereus
           R309803]
 gi|229603243|ref|YP_002868448.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|254683918|ref|ZP_05147778.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. CNEVA-9066]
 gi|254721753|ref|ZP_05183542.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. A1055]
 gi|254736266|ref|ZP_05193972.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. Western North America USA6153]
 gi|254744155|ref|ZP_05201838.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. Kruger B]
 gi|254754062|ref|ZP_05206097.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. Vollum]
 gi|254758245|ref|ZP_05210272.1| amino acid ABC transporter, permease component [Bacillus anthracis
           str. Australia 94]
 gi|301055646|ref|YP_003793857.1| amino acid ABC transporter permease [Bacillus anthracis CI]
 gi|30258873|gb|AAP28091.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47504819|gb|AAT33495.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|47555206|gb|EAL13553.1| MW1799 [Bacillus cereus G9241]
 gi|49180983|gb|AAT56359.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|49332469|gb|AAT63115.1| amino acid ABC transporter, permease [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51974814|gb|AAU16364.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|190562693|gb|EDV16659.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992452|gb|EDX56413.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|196021971|gb|EDX60662.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|218537877|gb|ACK90275.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|225787572|gb|ACO27789.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|227002630|gb|ACP12373.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|228620495|gb|EEK77365.1| Arginine transport system permease protein artQ [Bacillus cereus
           R309803]
 gi|229267651|gb|ACQ49288.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|300377815|gb|ADK06719.1| amino acid ABC transporter, permease [Bacillus cereus biovar
           anthracis str. CI]
          Length = 219

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 13  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DLYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 219



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADLYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQI 81


>gi|229125464|ref|ZP_04254521.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           95/8201]
 gi|228657992|gb|EEL13775.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           95/8201]
          Length = 219

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
           ++   ++   + M   A++ V  F++ IV+S+   F   L+   + K    L   YI  +
Sbjct: 1   MSFDYINSILMPMLEGAQMTVLLFLIAIVVSIPMGFLLTLAVRSNLKPLSWLAQGYI--Y 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P L+ +     + F  P+L     IG   V   F++  +      AA+ AEI R 
Sbjct: 59  VLRGTPLLLQLLF---ICFGLPML---PVIGEYLVMDRFVAACLGFILNYAAYFAEIFRG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL+A+ +GQ EA+  LGL+  +  R V+LPQ  R  +P + ++ + L+K+++L  AV   
Sbjct: 113 GLLAIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIKDTALLYAVAVP 172

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L+    T +N+    I    +   IYL +++++ +F   L  +  
Sbjct: 173 ELLHFAQTAVNRDF-TITPFFVAGLIYLIMTLVLTMFFKWLERRFK 217



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   +S    +L G   T  L    ++ +  +G L+     S  K ++W+ + Y+ V R 
Sbjct: 3   FDYINSILMPMLEGAQMTVLLFLIAIVVSIPMGFLLTLAVRSNLKPLSWLAQGYIYVLRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            P L+ + F+   +  +  I ++ ++  F
Sbjct: 63  TPLLLQLLFICFGLPMLPVIGEYLVMDRF 91


>gi|26987022|ref|NP_742447.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24981641|gb|AAN65911.1|AE016219_4 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 229

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 13/226 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L           ++   + V G++L++    ++R       +A+P  YI  F   G 
Sbjct: 7   FKWLPRLAEGATLTLELVAIAVVAGLILAIPLG-IARSSRHWYVRAVPFSYIFFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  
Sbjct: 64  PLLVQLFLVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGA 117

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+P+G++EAA ALG++  K    ++LP+A R  +P  +++ + +LK S+LA  V   +
Sbjct: 118 LQAIPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLE 177

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  +  TII +T   +EI       YL +S M+      L   + +
Sbjct: 178 LTGMARTIIARTYLPVEIFFAAGVFYLVISFMLVQGFKLLERWLRV 223



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    ++   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAEGATLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 69  LFLVYYGLAQFD 80


>gi|328544775|ref|YP_004304884.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
 gi|326414517|gb|ADZ71580.1| ABC transporter permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 221

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 12/229 (5%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
             F +        L     + ++ F  +   VL  F T  +R  H K   AL  +Y   F
Sbjct: 5   WDFHSVWQYYDLFLWGLWISVVYTFGSIFFGVLIGFVTCAARLSHWKALNALARIYQEIF 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
                P LV +   Y           F  + G ++    ++  + LS Y  AF AEI R 
Sbjct: 65  --RCTPLLVQLLWFYY---------AFPLLIGGSIDNR-VAAMLTLSLYVGAFYAEIFRG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++++ +GQ EAA A+G+   ++   ++LPQA++ ++P   +Q +   KN+SL   +  A
Sbjct: 113 GIVSIDKGQREAAAAIGMNPWQSMTRIILPQALKRMLPSFINQSVIQFKNTSLVSVISVA 172

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           DL  +   +  QT + +E   +   +Y+ + + +    + +  ++ + +
Sbjct: 173 DLAYMAAVVNGQTYRPLESYSVMAVLYIVMLLPLTQAADWIERRLRVSD 221



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S   Y    L G   +    F  +    +IG +  A RLS  K +  + R+Y E+FR
Sbjct: 6   DFHSVWQYYDLFLWGLWISVVYTFGSIFFGVLIGFVTCAARLSHWKALNALARIYQEIFR 65

Query: 138 NIPPLVVIFFLYKSVL 153
             P LV + + Y +  
Sbjct: 66  CTPLLVQLLWFYYAFP 81


>gi|68249636|ref|YP_248748.1| amino-acid ABC transporter permease protein [Haemophilus influenzae
           86-028NP]
 gi|319897441|ref|YP_004135638.1| amino-acid abc transporter permease protein [Haemophilus influenzae
           F3031]
 gi|68057835|gb|AAX88088.1| probable amino-acid ABC transporter permease protein [Haemophilus
           influenzae 86-028NP]
 gi|317432947|emb|CBY81314.1| probable amino-acid ABC transporter permease protein [Haemophilus
           influenzae F3031]
          Length = 225

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 13/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                 +    T+      F    ++ +++++  T  S +   K  +AL  +YIS  +I 
Sbjct: 13  FWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIR 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I + +   +  P +       G T+ P F +  IA S    A+ AE VR+ +I
Sbjct: 71  GTPMLVQIFIIF---YGLPEV-------GITLEP-FPTAIIAFSINIGAYAAETVRASII 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EA+ A+G+ +R+A    ++PQA+R  +P L++ +++ +K++SLA  V   +L 
Sbjct: 120 AIPKGQWEASYAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELF 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            V   I     + I I      IY     +++   +RL  +++ 
Sbjct: 180 RVAQNITAANYEFILIYSEAALIYWIFCFVLSFLQDRLEIRLSR 223



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVFR 137
           SS+   +    + T  LA        +I  +V   R   +      L+  +CRVY+ + R
Sbjct: 11  SSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYISIIR 70

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             P LV IF ++  +  V    +          +N    +  T+     A 
Sbjct: 71  GTPMLVQIFIIFYGLPEVGITLEPFPTAIIAFSINIGAYAAETVRASIIAI 121


>gi|254820303|ref|ZP_05225304.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium intracellulare ATCC 13950]
          Length = 605

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 16/239 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                          +  +  +     +   +  +G+ L +    ++     +  +    
Sbjct: 358 RDSFFDWEMYRQAIPALFSTGLPNTLILTSSASAIGLTLGMLL-AIAGISQSRWLRWPAR 416

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y   F   GLP +V+I +          LG    +GG T +  +     AL    AA+I
Sbjct: 417 VYTDVF--RGLPEVVIILII--------GLGVGPIVGGLTNNNPYPIGVAALGMMAAAYI 466

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+RSG+ +V  GQ+EA+ ALG ++  A RLV++PQ +R ++P L +Q++ LLK S+L 
Sbjct: 467 GEILRSGIQSVDPGQLEASRALGFSYPVAMRLVVVPQGVRRVLPALVNQFIALLKASALV 526

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G      +L  VG  +  QTG  +  ++     YL L++ +   +N ++A++    
Sbjct: 527 YFLGLVADQRELFQVGRDLNAQTGN-LSPLVAAGAFYLILTVPLTHLVNYIDARLRRGR 584



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 12/154 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G  NT  L  S       +G L+    +S ++ + W  RVY +VFR +P +V+I  +
Sbjct: 375 FSTGLPNTLILTSSASAIGLTLGMLLAIAGISQSRWLRWPARVYTDVFRGLPEVVIILII 434

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG------------LSFPTLTMDTNAKIFVFSFVL 196
              V  ++    ++   P G+                  +          ++   FS+ +
Sbjct: 435 GLGVGPIVGGLTNNNPYPIGVAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYPV 494

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            + L +    + R       + + LL  S  + F
Sbjct: 495 AMRLVVVPQGVRRVLPALVNQFIALLKASALVYF 528


>gi|238027538|ref|YP_002911769.1| amino acid ABC transporter permease [Burkholderia glumae BGR1]
 gi|237876732|gb|ACR29065.1| Amino acid ABC transporter, permease protein [Burkholderia glumae
           BGR1]
          Length = 219

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           K  V S V G++ ++    L    H +   A+  +Y+S  L+ G P L
Sbjct: 11  LPVLAQGAVLTVKFAVLSMVFGLIAAVVL-ALMGIAHSRVLNAIARVYVS--LMRGTPLL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  +  G
Sbjct: 68  VQIFVIY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIESG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  A+ +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     
Sbjct: 117 QWLASYSLGLSWSQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQE 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           II  T Q + + L    +Y  L  ++         ++AL  +
Sbjct: 177 IIASTYQPLPLYLAAAAVYWVLCQILEWVQRWCERRLALPGR 218



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 39/95 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T   A   M+   I   ++    ++ ++++  I RVYV + R  P LV IF 
Sbjct: 13  VLAQGAVLTVKFAVLSMVFGLIAAVVLALMGIAHSRVLNAIARVYVSLMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +Y  + S+    D +      +  N       ++ 
Sbjct: 73  IYYGLPSLGISLDPTPAGVIALSANVAAYMSESMR 107


>gi|296103153|ref|YP_003613299.1| arginine transporter permease subunit ArtQ [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057612|gb|ADF62350.1| arginine transporter permease subunit ArtQ [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 238

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 110/225 (48%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRL--SRHFHEKT--------GKALPLLYISTFLIFGLPT 234
               + V + ++G+VL++F      ++ F             + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIIGLVLAMFFAVWESAKWFPVAWTGSALVTVLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + L+     +     I    VSP F+   IALS   +A+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTLNLGVVQIPVQMQIENFDVSP-FLCGVIALSLLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALG++       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 QGQWESGQALGMSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|283853863|ref|ZP_06371079.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283570738|gb|EFC18782.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 231

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 18/229 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+         +F LG+ + LF     R    +  +   ++YI   +I 
Sbjct: 18  FPQGPLGGLAMTVLLAVGGIFGAFWLGLGIGLF-----RISKLRRLRWPAMVYIE--IIR 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L    + +  +F  PVL            PE  S  IAL  +T+A+IAEIVR+G+ 
Sbjct: 71  GTPLL---MVVFWFYFLAPVLLGKTL-------PEAQSALIALIVFTSAYIAEIVRAGVE 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQMEAA   GL H +    V+LPQA+ ++IP   +Q+++L K++SLA  +G  +L 
Sbjct: 121 ALPKGQMEAARGTGLNHFQTMTHVILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVNELT 180

Query: 351 SVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                + ++T     EI +    +Y  +   +     RL   I   + +
Sbjct: 181 KAATQVNSRTLTAPTEIFITIALLYFVICYCLTELSRRLEKHINRYQAR 229



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 32/61 (52%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  LA  G+  A  +G  +G  R+S  + + W   VY+E+ R  P L+V+F+ Y
Sbjct: 23  LGGLAMTVLLAVGGIFGAFWLGLGIGLFRISKLRRLRWPAMVYIEIIRGTPLLMVVFWFY 82

Query: 150 K 150
            
Sbjct: 83  F 83


>gi|293605338|ref|ZP_06687723.1| amino acid ABC superfamily ATP binding cassette transporter
           [Achromobacter piechaudii ATCC 43553]
 gi|292816277|gb|EFF75373.1| amino acid ABC superfamily ATP binding cassette transporter
           [Achromobacter piechaudii ATCC 43553]
          Length = 217

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +F  +  L + L L    L+R         L   YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLTLFFITLALAVPLGLVL-ALARISKWPLLSNLVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ E +  LG
Sbjct: 74  LPFVPVV--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   D++     I+ +     
Sbjct: 126 MTYLQTLRRIVLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              L+    YL +++++  F   +  + A  ++
Sbjct: 185 TPFLVAAAFYLLMTLVLTWFFQHMEKRYAKYDQ 217



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L F  +  A  +G ++   R+S   L++ +   Y+ + R  P ++ + F+Y +
Sbjct: 14  GAKVTLTLFFITLALAVPLGLVLALARISKWPLLSNLVNGYIWLMRGTPLMLQMLFIYFA 73

Query: 152 VLSVLPIPDHSIVLP 166
           +  V  +       P
Sbjct: 74  LPFVPVVGVRLPDFP 88


>gi|237802191|ref|ZP_04590652.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331025048|gb|EGI05104.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 229

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 5/220 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G+VL++    ++R     + +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLVLAIPLG-IARASRLWSVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y       V+ Q        +   F    I ++ +TAA+IAEI+R  + AVP 
Sbjct: 66  LVQLFLVYYGLAQFDVVRQGPL--WPYLRDPFWCAVITMTLHTAAYIAEILRGAIQAVPV 123

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  
Sbjct: 124 GEVEAARALGMSKWKALFYIVLPRATRIGLPAYSNEVILMLKASALASTVTLLELTGMAR 183

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           TII +T   +EI       YL ++ ++      L   + +
Sbjct: 184 TIIARTYMPVEIFFAAGMFYLVMTFVLVQGFRLLEKLLRV 223



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 29/82 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   ++   +G  R S    V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLVLAIPLGIARASRLWSVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +    +   
Sbjct: 69  LFLVYYGLAQFDVVRQGPLWPY 90


>gi|254303824|ref|ZP_04971182.1| amino acid ABC superfamily ATP binding cassette transporter
           membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324016|gb|EDK89266.1| amino acid ABC superfamily ATP binding cassette transporter
           membrane protein [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 236

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 97/176 (55%), Gaps = 10/176 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI   +I G P +V + +   L F          +G    +P  +   IA    + A+
Sbjct: 71  IAYIYIDIIRGTPVVVQLMILANLIF----------VGVLRETPILVIGGIAFGLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+  + +GQMEA  ALGL++ +  R +++PQA+++I+P L S+++ LLK +S+
Sbjct: 121 VAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFITLLKETSI 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G  DL+     I +QT + +E +L    IYL L+ +   FM ++   + + +
Sbjct: 181 IGFIGGVDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|30022233|ref|NP_833864.1| arginine ABC transporter permease [Bacillus cereus ATCC 14579]
 gi|218233478|ref|YP_002368956.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|296504643|ref|YP_003666343.1| arginine ABC transporter permease [Bacillus thuringiensis BMB171]
 gi|29897790|gb|AAP11065.1| Arginine transport system permease protein artQ [Bacillus cereus
           ATCC 14579]
 gi|218161435|gb|ACK61427.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|296325695|gb|ADH08623.1| arginine ABC transporter permease [Bacillus thuringiensis BMB171]
          Length = 219

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 13  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGVPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 219



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +      Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADFYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQI 81


>gi|258507568|ref|YP_003170319.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|257147495|emb|CAR86468.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259648917|dbj|BAI41079.1| ABC transporter permease component [Lactobacillus rhamnosus GG]
          Length = 237

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 5/210 (2%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      F    ++ +V +L    + +    +  K + + Y+  F     P LV + +
Sbjct: 19  YTIPIALVSFAIGLIIALVTALTRISVRKGVLIRIAKGIAVFYVWLF--RSTPLLVQLFI 76

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +   F  P L                +  I  S  T A+ AE +R+ L+++  GQ EAA
Sbjct: 77  VF---FGLPSLIIPGIFPHGIKLDPVAAGIITFSLNTGAYCAETIRASLLSIDSGQWEAA 133

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+GL  R   R +++PQA+R+ IPPL++ +++L+K++SLA ++   ++  V   I  + 
Sbjct: 134 YAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQVSQQIAAEN 193

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            Q + +  I   +Y  +   +A     L  
Sbjct: 194 YQPLLMYSIVALLYAIVCTFLAWGQRYLEK 223


>gi|237739680|ref|ZP_04570161.1| amino acid transport system permease [Fusobacterium sp. 2_1_31]
 gi|262066638|ref|ZP_06026250.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium periodonticum ATCC 33693]
 gi|294783187|ref|ZP_06748511.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium sp. 1_1_41FAA]
 gi|229423288|gb|EEO38335.1| amino acid transport system permease [Fusobacterium sp. 2_1_31]
 gi|291379661|gb|EFE87179.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium periodonticum ATCC 33693]
 gi|294480065|gb|EFG27842.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium sp. 1_1_41FAA]
          Length = 236

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 99/176 (56%), Gaps = 10/176 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI   +I G P +V + +   L F          +G    +P  +   IA    + A+
Sbjct: 71  IAYIYIDVIRGTPVVVQLMILANLIF----------VGALRETPILVIGGIAFGLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+  + +GQMEA  ALGL++ +  R +++PQA+++I+P L S+++ LLK +S+
Sbjct: 121 VAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFITLLKETSI 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G  DL+     I +QT + +E +L   FIYL L+ +  +FM ++   + + +
Sbjct: 181 IGFIGGIDLLRSASIITSQTYRGVEPLLAVGFIYLILTSIFTVFMRKVERGLKVSD 236


>gi|44004547|ref|NP_982216.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|218848267|ref|YP_002455140.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|229113501|ref|ZP_04242950.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           Rock1-15]
 gi|229164678|ref|ZP_04292542.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           R309803]
 gi|296506620|ref|YP_003667854.1| amino acid ABC transporter permease protein [Bacillus thuringiensis
           BMB171]
 gi|42741613|gb|AAS45058.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|218540318|gb|ACK92714.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|228618758|gb|EEK75720.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           R309803]
 gi|228669919|gb|EEL25313.1| Amino acid ABC transporter, permease protein [Bacillus cereus
           Rock1-15]
 gi|296327207|gb|ADH10134.1| amino acid ABC transporter, permease protein [Bacillus
           thuringiensis BMB171]
          Length = 219

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 112/226 (49%), Gaps = 12/226 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
           ++   ++   + M   A++ V  F++ IV+S+   F   L+   + K    L   YI  +
Sbjct: 1   MSFDYINSILMPMLEGAQMTVLLFLIAIVVSIPMGFLLTLAVRSNLKPLSWLAQGYI--Y 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P L+ +     + F  P+L     IG   V   F++  +      AA+ AEI R 
Sbjct: 59  VLRGTPLLLQLLF---ICFGLPLL---PVIGEYLVMDRFVAACLGFILNYAAYFAEIFRG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL+A+ +GQ EA+  LGL+  +  R V+LPQ  R  +P + ++ + L+K+++L  AV   
Sbjct: 113 GLLAIDKGQYEASQVLGLSKWQTMRRVILPQMFRIALPAVANESVTLIKDTALLYAVAVP 172

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L+    T +N+    I    +   IYL +++++ +F   L  +  
Sbjct: 173 ELLHFAQTAVNRDF-TITPFFVAGLIYLIMTLVLTMFFKWLERRFK 217



 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 40/89 (44%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   +S    +L G   T  L    ++ +  +G L+     S  K ++W+ + Y+ V R 
Sbjct: 3   FDYINSILMPMLEGAQMTVLLFLIAIVVSIPMGFLLTLAVRSNLKPLSWLAQGYIYVLRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            P L+ + F+   +  +  I ++ ++  F
Sbjct: 63  TPLLLQLLFICFGLPLLPVIGEYLVMDRF 91


>gi|237654575|ref|YP_002890889.1| polar amino acid ABC transporter inner membrane subunit [Thauera
           sp. MZ1T]
 gi|237625822|gb|ACR02512.1| polar amino acid ABC transporter, inner membrane subunit [Thauera
           sp. MZ1T]
          Length = 216

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 97/204 (47%), Gaps = 16/204 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +  LG+ L+L      R   +     +       +L+ G P ++ +   Y      P   
Sbjct: 29  AVPLGLALALVRISRFRVASQAVNAYI-------WLMRGTPLMLQMLFIYYALPFVP--- 78

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                G     P+F +  +A +   AA+ AEI R+G+ ++ RGQ E A  LG ++ +  R
Sbjct: 79  -----GIGIRLPDFPAAIVAFALNYAAYFAEIFRAGIQSIDRGQYEGAKVLGFSYGQTMR 133

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQ ++ I+PP++++ + L+K++SL   +   DL+     I+ +    I   ++   
Sbjct: 134 RIVLPQVVKRILPPMSNETITLVKDTSLIYVLALNDLLRAARGIVQRDF-TITPFIVAAA 192

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
            YL +++++     RL  + A+ +
Sbjct: 193 FYLIMTLVLTWLFQRLEKRHAVYD 216


>gi|330980427|gb|EGH78530.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 329

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    +     L   V S+   P     +    F +   L     T+       +FS +L
Sbjct: 42  RWFGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTLFSIIL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----G 252
           G  L+L     +R        AL   YI  F       +++I   +   +D  VL     
Sbjct: 102 GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 156

Query: 253 QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           Q  F   STV    +F    + LS   +A+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 QLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPVSRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTVLTSAQYYVERHFARGSAR 304



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 1/146 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-PLVVIFFL 148
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P  LV+I   
Sbjct: 81  LRGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
             + L    +             +   +            +   ++   I+        +
Sbjct: 141 NFAYLYDHIVLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDA 200

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPT 234
                     LP+      +I     
Sbjct: 201 GQHEAAAALGLPVSRRIFRIILPQAL 226


>gi|167031321|ref|YP_001666552.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166857809|gb|ABY96216.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 229

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 13/226 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L           ++   + V G++L++    ++R       +A+P  YI  F   G 
Sbjct: 7   FKWLPRLAEGATLTLELVAIAVVAGLILAIPLG-IARSSRHWYVRAVPFSYIFFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  
Sbjct: 64  PLLVQLFLVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGA 117

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P+G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +
Sbjct: 118 LQSIPKGEIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLE 177

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  +  TII +T   +EI       YL +S ++      L   + +
Sbjct: 178 LTGMARTIIARTYLPVEIFFAAGVFYLVISFLLVQGFKLLERWLRV 223



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    ++   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAEGATLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 69  LFLVYYGLAQFD 80


>gi|33601772|ref|NP_889332.1| putative ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
 gi|33576209|emb|CAE33288.1| putative ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
          Length = 217

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 102/214 (47%), Gaps = 12/214 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F  +  L + L L    L+R    +    L   YI  +L+ G P ++ +   Y 
Sbjct: 16  QVTLTLFFITLALAVPLGLVL-ALARISRWRLLSRLVNGYI--WLMRGTPLMLQLLFIYF 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ E +  L
Sbjct: 73  ALPFVPVV--------GIRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   D++     I+ +    
Sbjct: 125 GMTYLQTMRRIVLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDF-T 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               L+    YL +++++  F   +  + A  ++
Sbjct: 184 TTPFLVAAAFYLIMTLILTWFFQHMEKRYAKYDQ 217



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L F  +  A  +G ++   R+S  +L++ +   Y+ + R  P ++ + F+Y +
Sbjct: 14  GAQVTLTLFFITLALAVPLGLVLALARISRWRLLSRLVNGYIWLMRGTPLMLQLLFIYFA 73

Query: 152 VLSVLPIPDHSIVLP 166
           +  V  +       P
Sbjct: 74  LPFVPVVGIRLPDFP 88


>gi|326792531|ref|YP_004310352.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326543295|gb|ADZ85154.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 229

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 14/214 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++  +S +LG +  L AT L +   +K    L   YI+  ++ G P L+ +   + 
Sbjct: 30  WMTLQLSFYSILLGTLFGLLATIL-KLSKKKILMQLIDCYIT--IVRGTPLLLQLIFIFS 86

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P L              F S  I L+ ++ A+I+EI R  + ++ +GQ EAA AL
Sbjct: 87  ---ALPQL--------GIEFDSFSSAIIGLAFHSGAYISEIFRGAIESIDKGQNEAAKAL 135

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +A R ++LPQA +  IP L +Q++  +K+SSLA A+   +++ +     +    A
Sbjct: 136 GMTKLQAMRRIILPQAFKRSIPALGNQFIIAIKDSSLASAITITEIIMLTRQYASIKFDA 195

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I  +    YL +++ +   +  +  ++ + E+
Sbjct: 196 FPIFFVAALYYLIITLSLTKLLAYIEKRLKVNER 229



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  L+F  ++  T+ G L    +LS  K++  +   Y+ + R  P L+ + F+
Sbjct: 25  FLPGVWMTLQLSFYSILLGTLFGLLATILKLSKKKILMQLIDCYITIVRGTPLLLQLIFI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           + ++  +    D       G+  +
Sbjct: 85  FSALPQLGIEFDSFSSAIIGLAFH 108


>gi|296158852|ref|ZP_06841681.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891057|gb|EFG70846.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 312

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 112/265 (42%), Gaps = 14/265 (5%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
             ++++  +    L V        ++   +F N R L     T+   A         G+V
Sbjct: 54  YAMLLVVVILFVELVVDNPRWQWDIVAHYLF-NKRVLKGLGNTLVLTASSSALGLCFGVV 112

Query: 200 LSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           ++          R + + +    +A P L +   L F    +       +L+   P L  
Sbjct: 113 IAACRMADNAVLRAAGYVYIWIIRATPPLAMLLLLFFLSALIP------RLYLPLPFLHA 166

Query: 254 FNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             F I  + +   F +  I L+ Y   + AEI R G+ AV RGQ EA  A+G++      
Sbjct: 167 NLFDIDTNQIISRFSAAVIGLAMYLGGYSAEIFRGGVSAVDRGQREACKAIGMSDFHTMW 226

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V++PQA+R IIPPL ++ + + KN+SL   +G+ +L++    I     + I ++ +   
Sbjct: 227 HVVMPQAVRIIIPPLANELITMFKNTSLVTVIGYVELLTTVQLIYATNFETIPLLTVACI 286

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
            YL+L+ +     + L        +
Sbjct: 287 WYLALTSLAMAAQSLLERHFRKGVR 311



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 4/108 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L  S        G ++ A R++ N ++     VY+ + R  PP      + 
Sbjct: 89  LKGLGNTLVLTASSSALGLCFGVVIAACRMADNAVLRAAGYVYIWIIRATPP----LAML 144

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             +  +  +     +    +  N   +    +    +A +   +  LG
Sbjct: 145 LLLFFLSALIPRLYLPLPFLHANLFDIDTNQIISRFSAAVIGLAMYLG 192


>gi|260774959|ref|ZP_05883859.1| putative amino acid ABC transporter permease protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260609049|gb|EEX35208.1| putative amino acid ABC transporter permease protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 246

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 13/235 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               VL          L F +        I + S  L +++ L    L    + +    L
Sbjct: 22  WGWYVLDPSTEQGQTNLKFLSAGFYDTITISLLSMTLAMLIGLLV-ALPSLSNARWLNGL 80

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +Y+   +I  +P LVL+     +++  P L   +          F +  IAL+   +A
Sbjct: 81  NRVYVE--VIRSIPVLVLLL---WVYYGLPTLLDISL-------DHFWAGVIALTVAESA 128

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+AE+ R G+ ++ +GQ EAA +LGL + +  RLV+LPQA R I+PPL +Q++ +LK SS
Sbjct: 129 FMAEVFRGGIQSIAKGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYILKMSS 188

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L   +G +DL      ++      +EI    +  YL L ++++  +  L  +IA+
Sbjct: 189 LVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLILILLVSQAVRWLEQRIAI 243



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 38/74 (51%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               +    +  GF +T  ++   M  A +IG LV    LS  + +  + RVYVEV R+I
Sbjct: 32  EQGQTNLKFLSAGFYDTITISLLSMTLAMLIGLLVALPSLSNARWLNGLNRVYVEVIRSI 91

Query: 140 PPLVVIFFLYKSVL 153
           P LV++ ++Y  + 
Sbjct: 92  PVLVLLLWVYYGLP 105


>gi|150398297|ref|YP_001328764.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150029812|gb|ABR61929.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 274

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 118/230 (51%), Gaps = 10/230 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLI 229
           L    +T+      FV + +LG+ ++L A       R    F+ +  + +P+L +  ++ 
Sbjct: 48  LKGLGVTVFVTLVGFVLATLLGLGVALMALSGHVALRQIARFYTEVIRGVPILVLLFYIA 107

Query: 230 F-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           F G P LV  A             +   +   ++        IAL    +AFIAE+ R+G
Sbjct: 108 FVGAPALVTAANFVAAPLISAGWMEAFVVRDVSLM---WRAIIALMIGYSAFIAEVFRAG 164

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V +GQ+EAA ALGL+  +  RLV+ PQA+R I+PPL + ++ ++K+SSL   +G AD
Sbjct: 165 IQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVAD 224

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  +G    + + +  E   I  ++YL L+I ++L +  +  ++   + +
Sbjct: 225 VTQMGKIYASGSFRFFETYSIVAYVYLVLTIGLSLALRAVEQRLRRSQVR 274



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 2/157 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T +L G   T ++   G + AT++G  V    LS +  +  I R Y EV R +P LV++
Sbjct: 44  FTVVLKGLGVTVFVTLVGFVLATLLGLGVALMALSGHVALRQIARFYTEVIRGVPILVLL 103

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           F++       L    + +  P              +++   A I +       +  +F  
Sbjct: 104 FYIAFVGAPALVTAANFVAAPLISAGWMEAFVVRDVSLMWRAIIALMIGYSAFIAEVFRA 163

Query: 206 RL--SRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            +        +  KAL L     F +   P  + + L
Sbjct: 164 GIQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVIL 200


>gi|126699791|ref|YP_001088688.1| amino-acid ABC transporter permease [Clostridium difficile 630]
 gi|255101313|ref|ZP_05330290.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|255307189|ref|ZP_05351360.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
 gi|115251228|emb|CAJ69059.1| ABC-type transport system,cystine/aminoacid-family permease
           [Clostridium difficile]
          Length = 220

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 110/231 (47%), Gaps = 15/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + + + L    +    +T+       VFS ++G +++L     S ++  K    +  +
Sbjct: 3   FNMKYFLELFPTIMKSFNVTVILAISSLVFSLIIGTIVAL-----SSYYKVKVLNQICKV 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G P +  +   + L+F    +  F             +  I LS    A+++
Sbjct: 58  YVSIF--RGTPLMPQL---FFLYFGLAYMSDF-----VKNMDPVFATSIVLSLNMGAYMS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ ++++  GQ+EAA A+GLT+ +  + +++PQA+R  +P L + +++L+K SS+A 
Sbjct: 108 ETIRASILSIDTGQIEAAYAMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            VG  D++    +    + +  E+    M IY  +   +     +L  KI+
Sbjct: 168 VVGVNDIMGAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGQKKLEKKIS 218



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 YKSV 152
           Y  +
Sbjct: 75  YFGL 78


>gi|327480953|gb|AEA84263.1| cystine ABC transporter, permease protein, putative [Pseudomonas
           stutzeri DSM 4166]
          Length = 222

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 13/187 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +     + L  +Y+S F   G P LV + + Y   +  P L                +  
Sbjct: 47  YAFWPLQWLARVYVSFF--RGTPLLVQLFMIY---YGLPQL--------GIQLDPLPAAL 93

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+ AEI+R+ + ++ RGQ EAA ++G+   +     +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYTAEILRAAIASIDRGQWEAAASIGMGRAQTLYRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ ++A F  RL  
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWLLASVLAYFQGRLEH 213

Query: 391 KIALKEK 397
           ++   E+
Sbjct: 214 RVNRHEQ 220



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 37/85 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    ++G  +   RL A   + W+ RVYV  FR  P LV +F +
Sbjct: 16  LLKGAWWTVVLSLGGMFFGLLLGFGLALLRLYAFWPLQWLARVYVSFFRGTPLLVQLFMI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G  LN 
Sbjct: 76  YYGLPQLGIQLDPLPAALIGFSLNM 100


>gi|269138890|ref|YP_003295591.1| amino-acid ABC transporter permease component [Edwardsiella tarda
           EIB202]
 gi|267984551|gb|ACY84380.1| amino-acid ABC transporter permease component [Edwardsiella tarda
           EIB202]
 gi|304558876|gb|ADM41540.1| amino-acid ABC transporter permease component [Edwardsiella tarda
           FL6-60]
          Length = 233

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 20/249 (8%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
               +L  LP PD    +    +         +  +  +  + + SF  G+++ L  T L
Sbjct: 5   WLSPLLDTLPHPDWLQPVVDAFWP------LLSAALRFSIPLALLSFCGGLLMGL-TTAL 57

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R +  +  K     Y+  F   G P LV + L +                       F 
Sbjct: 58  IRLYAIRPLKICADFYVWVF--RGTPLLVQLFLIFY-----------GLPSAGITLDAFP 104

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EIVR  +++VPRGQ EAA A+G++  +A R V+LPQ++   +PPL
Sbjct: 105 AALIGFTLNVGAYSSEIVRGAILSVPRGQWEAASAIGMSSAQAMRRVILPQSVFVSLPPL 164

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA  +   ++      I+    + + I      IYL+ S ++     R
Sbjct: 165 SNAFISLIKDTSLAAVITVPEMFLAAQRIVAVNYEPLIIYSETALIYLAFSTLLGKLQLR 224

Query: 388 LNAKIALKE 396
           L       E
Sbjct: 225 LERYYRRYE 233



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            ++   +      +  LA        ++G      RL A + +      YV VFR  P L
Sbjct: 24  DAFWPLLSAALRFSIPLALLSFCGGLLMGLTTALIRLYAIRPLKICADFYVWVFRGTPLL 83

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S     D       G  LN
Sbjct: 84  VQLFLIFYGLPSAGITLDAFPAALIGFTLN 113


>gi|218515414|ref|ZP_03512254.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli
           8C-3]
          Length = 549

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 1/254 (0%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             +   + S    P     +    F     L     T+   A   +   +LG  L+L   
Sbjct: 3   VVIIAVLYSTFTNPRWGWGVFAEWFFAEPVLVGLGRTLLLTALAAISGSILGTALALARV 62

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSP 264
             S      +   + LL     ++  L    L  L   +    P      F   +  +  
Sbjct: 63  SKSPLLSGLSWGYIWLLRSIPIIVLLLILNNLGYLYETIRIGVPFTDTVLFDYPTVQLLT 122

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F + Y+ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAMRSI+
Sbjct: 123 PFAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAMRSIL 182

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ + L K++S+   +   +L      I  +  + I ++++    YL +  ++++ 
Sbjct: 183 PTGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSVA 242

Query: 385 MNRLNAKIALKEKK 398
            + +    +    +
Sbjct: 243 QHYIERYFSKGAVR 256



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 20/210 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN-----IPPLVV 144
           LVG   T  L     I  +I+GT +   R+S + L++ +   Y+ + R+     +  ++ 
Sbjct: 33  LVGLGRTLLLTALAAISGSILGTALALARVSKSPLLSGLSWGYIWLLRSIPIIVLLLILN 92

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL---- 200
                   + +      +++  +         +   L +  N   F    V G +L    
Sbjct: 93  NLGYLYETIRIGVPFTDTVLFDYPTVQLLTPFAAAYLGLTLNQSAFFAEIVRGGILSVDH 152

Query: 201 -------SLFATRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                  +L   R  + F     +A    LP  +     +    ++V +    +L +   
Sbjct: 153 GQLEAAAALGLPRRRQAFRIVLPQAMRSILPTGFNELIGLAKSTSVVYVLALPELFYTVQ 212

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           V+ + N      +    +   I ++  + A
Sbjct: 213 VIYRRNLEVIPLLMVATVWYLIIMTVLSVA 242


>gi|146282695|ref|YP_001172848.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           stutzeri A1501]
 gi|145570900|gb|ABP80006.1| cystine ABC tranporter, permease protein, putative [Pseudomonas
           stutzeri A1501]
          Length = 222

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 13/187 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +     + L  +Y+S F   G P LV + + Y   +  P L                +  
Sbjct: 47  YAFWPLQWLARVYVSFF--RGTPLLVQLFMIY---YGLPQL--------GIQLDPLPAAL 93

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S   AA+ AEI+R+ + ++ RGQ EAA ++G+   +     +LPQA R+ +PPL + 
Sbjct: 94  IGFSLNMAAYTAEILRAAIASIDRGQWEAAASIGMGRAQTLYRAILPQAARTALPPLGNS 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++L+K+++LA  +   +L      I  +T +   + L    IY  L+ ++A F  RL  
Sbjct: 154 FISLVKDTALAATIQVPELFRQAQLITARTFEIFTMYLAAALIYWLLASVLAYFQGRLEH 213

Query: 391 KIALKEK 397
           ++   E+
Sbjct: 214 RVNRHEQ 220



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+ SGM    ++G  +   RL A   + W+ RVYV  FR  P LV +F +
Sbjct: 16  LLKGAWWTVVLSLSGMFFGLLLGFGLALLRLYAFWPLQWLARVYVSFFRGTPLLVQLFMI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    D       G  LN 
Sbjct: 76  YYGLPQLGIQLDPLPAALIGFSLNM 100


>gi|311108430|ref|YP_003981283.1| L-cystine transporter permease TcyB [Achromobacter xylosoxidans A8]
 gi|310763119|gb|ADP18568.1| L-cystine transport system permease protein TcyB [Achromobacter
           xylosoxidans A8]
          Length = 249

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 14/233 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +  V  +   + +         +     + + SF LG+ L+ F   L R F      AL 
Sbjct: 21  NWAVPAWVQLMLDSFWPLLHAGLMFTVPLTLMSFALGLALA-FVVALIRLFGPAPLVALV 79

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             Y+  +LI G P LV + + +                   V     +  I  +    A+
Sbjct: 80  RFYV--WLIRGTPLLVQLFVIFY-----------GLPSVGIVLDPLPAALIGFTLNVGAY 126

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +E++R  + ++ +GQ EAA +L +T  +A R  +LPQA R  +PPL++ ++ L+K++SL
Sbjct: 127 NSEVIRGAIESITKGQWEAAYSLSMTRAQALRRTILPQAARVAVPPLSNSFIALVKDTSL 186

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   ++      I   T + + +      IYL  S +++    RL  +  
Sbjct: 187 AAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSVLSAAQVRLERRFG 239



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G + T  L          +  +V   RL     +  + R YV + R  P L
Sbjct: 33  DSFWPLLHAGLMFTVPLTLMSFALGLALAFVVALIRLFGPAPLVALVRFYVWLIRGTPLL 92

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV  + D       G  LN
Sbjct: 93  VQLFVIFYGLPSVGIVLDPLPAALIGFTLN 122


>gi|126442978|ref|YP_001062437.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           pseudomallei 668]
 gi|126222469|gb|ABN85974.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 668]
          Length = 371

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +   ++   Y  T LI  +P LVL+ 
Sbjct: 153 WAGTIETVKLAVLSLAASLVLGLAGAA-AKLSSNRALASVGTFY--TTLIRAVPDLVLML 209

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 210 LLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEA 269

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++  Q MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 270 GFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 329

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  L +  L  + +   ++
Sbjct: 330 TLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRR 368


>gi|253584218|ref|ZP_04861416.1| amino acid transport system permease [Fusobacterium varium ATCC
           27725]
 gi|251834790|gb|EES63353.1| amino acid transport system permease [Fusobacterium varium ATCC
           27725]
          Length = 241

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 15/230 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-----FATRLSRHFHEKTGKALPLLYIST 226
               ++    ++ T     +   +LGI ++L     F     R   EK      L +   
Sbjct: 22  YMYIVNGLAFSIGTTMLAALIGVILGIFIALMELSHFYPLKHRKGWEKFNPLSSLAFAYV 81

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI G P +V + +   L F          +G    +P  +   ++    + A++AEI+R
Sbjct: 82  DLIRGTPAVVQLMILANLIF----------VGALRDTPILVIAGLSFGINSGAYVAEIIR 131

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  + +GQMEAA ALG+ +  A + +++PQA++ I+P L S+++ LLK +S+   +G 
Sbjct: 132 AGIEGLDKGQMEAARALGMPYGIAMKEIIIPQAVKKILPALVSEFITLLKETSIVGFIGG 191

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            DL+     I +QT + +E +L    IYL L+ +   FM  +   + + +
Sbjct: 192 VDLLRSANIITSQTYRGVEPLLAVGLIYLVLTAVFTKFMRGIEKGLKVSD 241


>gi|239833820|ref|ZP_04682148.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821883|gb|EEQ93452.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 239

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 9/236 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F      + L    LT+   A   VF   L ++ +L      R         +  L
Sbjct: 1   MNLEFYSDAFFQMLGGVPLTLKLAASSIVFGAFLALLFALM-----RLSGLTVLDWIARL 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F+  G P LV I + Y      P +          +   +    IAL+   AA+ +
Sbjct: 56  YV--FVFRGTPLLVQIFIIYYGLSQFPAIRYSFL--WPILREPYWCAIIALTLNNAAYAS 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R GL++VP GQ+EAA A G++     R +++P A+R  +P   ++ ++++K +SLA 
Sbjct: 112 EIIRGGLLSVPHGQIEAAKACGMSSFTCFRRIVMPLAIRQALPGYGNEMISMIKATSLAS 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   ++  +   +I ++ +AIEI +I   IYL+++ ++   +     ++    ++
Sbjct: 172 IITLMEVTGIAAKLIAESYRAIEIFVIAGAIYLAINFVLTRVLMFAEYRLTPYLRQ 227



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 1/110 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA S ++    +  L    RLS   ++ WI R+YV VFR  P LV IF +
Sbjct: 13  MLGGVPLTLKLAASSIVFGAFLALLFALMRLSGLTVLDWIARLYVFVFRGTPLLVQIFII 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           Y   LS  P   +S + P         +   TL     A   +   +L +
Sbjct: 73  YYG-LSQFPAIRYSFLWPILREPYWCAIIALTLNNAAYASEIIRGGLLSV 121


>gi|229177166|ref|ZP_04304555.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 172560W]
 gi|228606347|gb|EEK63779.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 172560W]
          Length = 218

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPVRI----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPVRILNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|311068998|ref|YP_003973921.1| high affinity arginine ABC transporter permease [Bacillus
           atrophaeus 1942]
 gi|310869515|gb|ADP32990.1| high affinity arginine ABC transporter permease [Bacillus
           atrophaeus 1942]
          Length = 219

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + F    +    KI V S V+G++L +    L +    +    +   Y 
Sbjct: 1   MNLDFSATIPQIPFILEGLGITLKIVVVSAVIGLILGIVL-SLCKISTFRPLIWIADFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + + Y   F  P L  F          +F +   ALS  +AA+++EI
Sbjct: 60  SVF--RGTPLVLQLMIVY---FGLPQLLGFQI-------DQFWAAVAALSLNSAAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ A+ +GQ EAA+ALG+ + K  + +LLPQA ++I P + ++ + L K S++   +
Sbjct: 108 IRAGINAIDKGQKEAAVALGVPYSKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++         T   +E ++I   IY  L +++      +  K+   +
Sbjct: 168 GLGDIMRRAYQAGAATYNYLEPLIIAGLIYYVLVLILTFVGKAIERKLKAND 219



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++       IL G   T  +     +   I+G ++   ++S  + + WI   Y  VF
Sbjct: 3   LDFSATIPQIPFILEGLGITLKIVVVSAVIGLILGIVLSLCKISTFRPLIWIADFYTSVF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           R  P ++ +  +Y  +  +L        
Sbjct: 63  RGTPLVLQLMIVYFGLPQLLGFQIDQFW 90


>gi|28872471|ref|NP_795090.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213971203|ref|ZP_03399321.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301382332|ref|ZP_07230750.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060017|ref|ZP_07251558.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302132164|ref|ZP_07258154.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28855726|gb|AAO58785.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213924072|gb|EEB57649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|330874240|gb|EGH08389.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330968062|gb|EGH68322.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 229

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 5/220 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAI-PMGIARASRHWPVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y        + Q        +   F    + ++ +TAA+IAEI+R  + AVP 
Sbjct: 66  LVQLFLVYYGLAQFDAVRQGPL--WPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQAVPV 123

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  
Sbjct: 124 GEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMAR 183

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           TII +T   +EI       YL ++ ++      L   + +
Sbjct: 184 TIIARTYLPVEIFFAAGMFYLVMTFVLVQGFRLLEKLLRV 223



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAIPMGIARASRHWPVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 69  LFLVYYGLAQFD 80


>gi|83720853|ref|YP_442092.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|257138278|ref|ZP_05586540.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|83654678|gb|ABC38741.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis E264]
          Length = 219

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P
Sbjct: 9   HTLPILARGAVLTMKFAVASMVLGLIVGLVV-AIVRIGNNRFLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y                         +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYY-----------GLPDIGISLDPTSAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHAQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T   A + M+   I+G +V   R+  N+ ++ I + YV + R  P LV +F +
Sbjct: 14  LARGAVLTMKFAVASMVLGLIVGLVVAIVRIGNNRFLSAIAQGYVSLMRGTPLLVQMFVV 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +    D +    F + LN
Sbjct: 74  YYGLPDIGISLDPTSAGIFTLTLN 97


>gi|84387890|ref|ZP_00990904.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84377236|gb|EAP94105.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 265

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 19/276 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
              ++ + ++ V V   +  L               +PD+      G +     +    +
Sbjct: 7   KPALSALVQIVVLVAAVVWILDSGAQTMGYSWQWERVPDYIAFYEDGEWWPAELVEGLLV 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T++ +    V + ++G+  +L      R+ +   G+ L   Y+   LI   P LV I L 
Sbjct: 67  TINISLISLVATLIIGLTTALL-----RNSNSVVGRTLATSYVE--LIRNTPLLVQIYLL 119

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +AL+ +  A+ AEI R+GL  + RGQ EAA 
Sbjct: 120 YFVF------------GPVLGLDRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQ 167

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+       V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T 
Sbjct: 168 SLGLSKTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETA 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              EI      IYL+L++ ++     L  K+    +
Sbjct: 228 MPFEIWFSVAIIYLALTLSLSAVAAWLEHKLGTNWR 263



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 13/123 (10%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           ++  ++L    +W +++    M       G  +  ER         + +  D  +  A L
Sbjct: 13  LVQIVVLVAAVVWILDSGAQTM-------GYSWQWER-----VPDYIAFYEDGEWWPAEL 60

Query: 91  V-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           V G + T  ++   ++   IIG      R S + +   +   YVE+ RN P LV I+ LY
Sbjct: 61  VEGLLVTINISLISLVATLIIGLTTALLRNSNSVVGRTLATSYVELIRNTPLLVQIYLLY 120

Query: 150 KSV 152
              
Sbjct: 121 FVF 123


>gi|326574956|gb|EGE24886.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 101P30B1]
          Length = 241

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 4/233 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +                 T  ++ V S  LG+V  +      R       +A+P  YI
Sbjct: 1   MNWNWQAIINYFPDLLAASVTTIELVVLSCALGLVFGVILGLW-RLSPVLWLRAIPATYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV I L Y        L + +F+     S  +    IA +  T+A+I EI
Sbjct: 60  FFF--RGTPLLVQIFLIYYGLGQFTALKE-SFLWDPIFSQAYWCAIIAFTLNTSAYIGEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  ++AVP G++EAA A+G++ R+    V+LP+A   ++P  +++ + +LK S+LA ++
Sbjct: 117 VRGAVMAVPTGELEAADAIGMSKRQKLHRVILPRAFGIMLPAYSNEVIFMLKGSALAASI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L      II+ T   +E+      IYL +S +      +   ++   ++
Sbjct: 177 TVVELTHKARDIISITYLHLEMFFAAGMIYLVISWVFLFIFRQFEHRVNRHKR 229



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L   V T  L         + G ++G  RLS    +  I   Y+  FR  P LV
Sbjct: 10  NYFPDLLAASVTTIELVVLSCALGLVFGVILGLWRLSPVLWLRAIPATYIFFFRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            IF +Y  +     + +  +  P         +   TL         V   V+ +
Sbjct: 70  QIFLIYYGLGQFTALKESFLWDPIFSQAYWCAIIAFTLNTSAYIGEIVRGAVMAV 124


>gi|323526704|ref|YP_004228857.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383706|gb|ADX55797.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 225

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   +           +     + + SF +G+ L+ F   L R F  K   A+   Y
Sbjct: 1   MPAWLHLMAQSLWPLLYAGLVFTVPLTLASFAIGLALA-FIVALVRLFGPKWAVAVVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F   G P LV + + +                   V     +  I  S    A+ +E
Sbjct: 60  VWLF--RGSPLLVQLFVIFY-----------GLPNVGIVLDPLTAAIIGFSLNVGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P+GQ EAA ++G+T  +A R  +LPQA R  +PPL++ ++ L+K++SLA  
Sbjct: 107 VIRGVIESIPKGQWEAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I + T + + +      +YL  S +++    RL  K   
Sbjct: 167 LTVPEVFQAAQRIASVTYEPLILYTEAALVYLLFSSVLSSAQVRLERKFGR 217



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S    +  G V T  L  +       +  +V   RL   K    + R YV +FR 
Sbjct: 6   HLMAQSLWPLLYAGLVFTVPLTLASFAIGLALAFIVALVRLFGPKWAVAVVRFYVWLFRG 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P LV +F ++  + +V  + D       G  LN
Sbjct: 66  SPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLN 99


>gi|260655293|ref|ZP_05860781.1| amino acid ABC transporter, permease/substrate-binding protein
           [Jonquetella anthropi E3_33 E1]
 gi|260629741|gb|EEX47935.1| amino acid ABC transporter, permease/substrate-binding protein
           [Jonquetella anthropi E3_33 E1]
          Length = 217

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 14/218 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                         K  +F  ++G    LF     R       + L  LYIS  ++ G P
Sbjct: 10  PYWHLFLNGALVTVKASLFGVLIGTAGGLFVGAF-RVLPFAPLRWLAWLYIS--VLRGTP 66

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V + L Y           F           F++  + +   ++A++ EIVR G+ ++P
Sbjct: 67  LMVQLFLIY-----------FGLPELGVNLDAFLAGVLGIGINSSAYVGEIVRGGIESIP 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA  LGL++ ++   +++PQA+RS++P + ++++ L+K SSL   +  +DL   G
Sbjct: 116 RGQWEAAKVLGLSYWQSLWTIIMPQAVRSMLPAIGNEFVALIKESSLLSVLAISDLTQAG 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             + + T  + E  ++   +YL L+      ++ L  K
Sbjct: 176 QQVRSVTYASFESFIVVGLVYLFLTSAATGALSLLEKK 213



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 42/96 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y    L G + T   +  G++  T  G  VGA R+     + W+  +Y+ V 
Sbjct: 3   LDFSVLLPYWHLFLNGALVTVKASLFGVLIGTAGGLFVGAFRVLPFAPLRWLAWLYISVL 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           R  P +V +F +Y  +  +    D  +    G+ +N
Sbjct: 63  RGTPLMVQLFLIYFGLPELGVNLDAFLAGVLGIGIN 98


>gi|260771024|ref|ZP_05879952.1| putative amino acid ABC transporter permease protein [Vibrio
           furnissii CIP 102972]
 gi|260613913|gb|EEX39104.1| putative amino acid ABC transporter permease protein [Vibrio
           furnissii CIP 102972]
          Length = 186

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 12/192 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L      +T +    +Y+   ++  +P LVL+     +++  PVL   +       
Sbjct: 5   LMVALPALSPRRTLRQANRVYVE--VVRAIPLLVLLL---WIYYGLPVLFDLSL------ 53

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  +ALS   +AF+AE+ R G+ A+ RGQ EAA ALGL   +  RLV+LPQA+R 
Sbjct: 54  -NHFTAGVMALSLAESAFMAEVFRGGIQAIDRGQHEAAQALGLRDWQKMRLVILPQALRH 112

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PPL +Q++ +LK SSL   +G +DL      ++      +EI    +  YL L ++++
Sbjct: 113 ILPPLGNQFIYILKMSSLVSVIGLSDLTRRANELVVTEYLPLEIYTFLVLEYLILILLVS 172

Query: 383 LFMNRLNAKIAL 394
             + RL  K+AL
Sbjct: 173 YGVRRLEKKLAL 184


>gi|260465476|ref|ZP_05812666.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259029780|gb|EEW31066.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 513

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 23/254 (9%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            + L  L            +  +   +     T+   A   V   VLG++L++     SR
Sbjct: 1   MNWLENLRRSFLDWQAMADVLPSMITI-GLKNTLILAAASTVIGVVLGMILAVMGISQSR 59

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-EFMS 268
                         + T +  GLP +V I L  Q          F  IG     P  +  
Sbjct: 60  WLRIPA-------RVYTDIFRGLPAIVTILLIGQ---------GFARIGREIFGPSPYPL 103

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS    A+I EI RSG+ +V RGQMEA  AL +++ +  RL+++PQ +R ++P L 
Sbjct: 104 GILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYGQGMRLIVVPQGIRRVLPALV 163

Query: 329 SQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           +Q++  +K+SSL   +G      ++  VG      TG  +  +L+    YL +++ +   
Sbjct: 164 NQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGN-LSPLLLAGVFYLVITVPLTHV 222

Query: 385 MNRLNAKIALKEKK 398
           +N ++  + + ++K
Sbjct: 223 VNYIDNSLRVGKQK 236



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 37/82 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +G  NT  LA +  +   ++G ++    +S ++ +    RVY ++FR +P +V I  +
Sbjct: 25  ITIGLKNTLILAAASTVIGVVLGMILAVMGISQSRWLRIPARVYTDIFRGLPAIVTILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            +    +          P G+ 
Sbjct: 85  GQGFARIGREIFGPSPYPLGIL 106


>gi|229171424|ref|ZP_04299009.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
 gi|228612128|gb|EEK69365.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
          Length = 218

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 118/220 (53%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++   ++  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWLGAAIVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++    L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTATLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYTQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+    VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWLGAAIVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|206971176|ref|ZP_03232127.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|218899316|ref|YP_002447727.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|206733948|gb|EDZ51119.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|218541175|gb|ACK93569.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|326941933|gb|AEA17829.1| arginine ABC transporter permease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 219

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +             T +  G 
Sbjct: 13  PYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 219



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   I+GTL+   +++  + +      Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFILGTLLALCKIARIRALNIAADFYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQI 81


>gi|163938357|ref|YP_001643241.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|163860554|gb|ABY41613.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
          Length = 230

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKILNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSIIVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL+L ++    ++ L
Sbjct: 147 NQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLDTYIIVGVYYLALVLLFTYLVSLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|254773104|ref|ZP_05214620.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family protein [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 602

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 20/216 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V   VLG+VL++     +   H +  +    +Y   F   GLP +V        
Sbjct: 384 LTFSASVIGLVLGMVLAV-----AGISHARWLRWPARVYTDVF--RGLPEVV-------- 428

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 LG    +GG T +  +     AL    AA+I EI+RSG+ +V  GQ+EA+ ALG
Sbjct: 429 IILLIGLGIGPIVGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALG 488

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQT 360
            ++  A RLV++PQ +R ++P L +Q++ LLK S+L   +G      +L  VG  +  +T
Sbjct: 489 FSYATAMRLVVVPQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELFQVGRDLNAET 548

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  +  ++     YL L++ +   +N ++A++    
Sbjct: 549 GN-LSPLVAAGACYLILTVPLTHLVNMIDARLRRGR 583



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 12/151 (7%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  L FS  +   ++G ++    +S  + + W  RVY +VFR +P +V+I  +   
Sbjct: 377 GLPNTLILTFSASVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVVIILLIGLG 436

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRG------------LSFPTLTMDTNAKIFVFSFVLGIV 199
           +  ++    ++   P G+                  +          ++   FS+   + 
Sbjct: 437 IGPIVGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALGFSYATAMR 496

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           L +    + R       + + LL  S  + F
Sbjct: 497 LVVVPQGVRRVLPALVNQFIALLKASALVYF 527


>gi|330954816|gb|EGH55076.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 229

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAI-PMGIARASRHWPVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF  +  S + P     F    + ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 120 AVPPGEIEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T   +EI       YL ++ ++      L   + +
Sbjct: 180 GMARTIIARTYLPVEIFFAAGMFYLVMTFVLVQGFRLLEKLLRV 223



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAIPMGIARASRHWPVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +   ++   
Sbjct: 69  LFLVYYGLAQFESVRQSALWPY 90


>gi|52425331|ref|YP_088468.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307383|gb|AAU37883.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 238

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 108/251 (43%), Gaps = 13/251 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +  ++L  +P    S V            +   +++      F+   ++ + ++L     
Sbjct: 1   MLNNLLLSIPFMTESRVDLVISAFWPMVEAAVLVSIPLAVSSFIIGMIIAVAVALVRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +    +  +YIS  +I G P LV I++ +   +  P LG F             
Sbjct: 61  VNGVIHRLFLVIVKVYIS--IIRGTPMLVQISVVF---YGLPALGIF--------IDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+++ +  R ++ PQA R  +PPL
Sbjct: 108 AAIIGFSLNIGAYASETVRAAISSVPKGQWEAGYTIGMSYMQTFRRIIAPQAFRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + I +    IY     ++ +   +
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPIYIEAGLIYWCFCWVLFVIQAK 227

Query: 388 LNAKIALKEKK 398
           +  ++     +
Sbjct: 228 VEKRMERYVAR 238


>gi|291087041|ref|ZP_06345220.2| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. M62/1]
 gi|291076279|gb|EFE13643.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. M62/1]
          Length = 227

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 118/230 (51%), Gaps = 11/230 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
                   +    +T+  +  I +   +LG +L++      +    +    L  +Y+   
Sbjct: 9   WDRYWMLFMQGLGVTLLLSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNTLAGIYVE-- 66

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P L+ +   Y  +F  P+         S      +   +AL   +AA+++E++RS
Sbjct: 67  IVRGTPMLLQL---YFFYFMLPMAFP------SMNLSPIVCCAVALCLNSAAYVSEVIRS 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV +GQMEAA +LGL HR+A   V+LPQA+++I+P L ++++ ++K++SLA      
Sbjct: 118 GIQAVDKGQMEAARSLGLNHRQAMVKVILPQAIKNIMPALGNEFVMMIKDTSLASTFFVG 177

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L++V  T+      ++E ++I   IY  ++  ++  +N +  ++   E+
Sbjct: 178 ELMTVWQTVRGVLYLSLEPLIIVGCIYFIVTFSLSKGINFMERRMRANER 227



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 5/83 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAWICRVYVEVFR 137
             Y    + G   T  L+   +I  T++G L+   RLS       + +  +  +YVE+ R
Sbjct: 10  DRYWMLFMQGLGVTLLLSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNTLAGIYVEIVR 69

Query: 138 NIPPLVVIFFLYKSVLSVLPIPD 160
             P L+ ++F Y  +    P  +
Sbjct: 70  GTPMLLQLYFFYFMLPMAFPSMN 92


>gi|187780000|ref|ZP_02996473.1| hypothetical protein CLOSPO_03596 [Clostridium sporogenes ATCC
           15579]
 gi|187773625|gb|EDU37427.1| hypothetical protein CLOSPO_03596 [Clostridium sporogenes ATCC
           15579]
          Length = 215

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 18/211 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A       ++GI+++L     ++      G         T++  G P L+ +   Y  
Sbjct: 23  LTAISVCLGSIIGIIVALLKLCNNKLVFYVGG-------FYTWIFRGTPLLLQLFFIYY- 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F+G       F +  + LS    A+ AEI+R G+I+V +GQ EA  ALG
Sbjct: 75  --------GLPFVG--IKFTPFSAAILGLSLNAGAYTAEIIRGGIISVDKGQFEACRALG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
             +    + ++LPQ  + IIP L ++++ +LK++SL   +   +++     + + T + +
Sbjct: 125 FNYFHTMKKIVLPQTFKIIIPSLGNEFITMLKDTSLVSTIAMVEVMRSAQLLYSSTFKPM 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E  ++   +YL ++ +          K ++ 
Sbjct: 185 ETFILTAVLYLIMTTIFTTIFGVFEKKASVY 215



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 39/89 (43%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                ++ G + T  L    +   +IIG +V   +L  NKLV ++   Y  +FR  P L+
Sbjct: 8   QITPVLIKGSIITIELTAISVCLGSIIGIIVALLKLCNNKLVFYVGGFYTWIFRGTPLLL 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +FF+Y  +  V            G+ LN
Sbjct: 68  QLFFIYYGLPFVGIKFTPFSAAILGLSLN 96


>gi|33596085|ref|NP_883728.1| putative amino-acid ABC transporter, permease protein [Bordetella
           parapertussis 12822]
 gi|33573088|emb|CAE36730.1| putative amino-acid ABC transporter, permease protein [Bordetella
           parapertussis]
          Length = 226

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 14/230 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   + +         +     + + SF  G+ L+ F   L R F      AL   Y
Sbjct: 1   MPAWLQLMLDSFWPLLHAGLMFTVPLTLLSFAAGLALA-FVVALLRLFGPWPIVALMRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +LI G P LV + + +                   V     +  I  +    A+ +E
Sbjct: 60  V--WLIRGTPLLVQLFVIFY-----------GLPSVGIVLDPLPAALIGFTLNVGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++PRGQ EAA +L +T  +A R  +LPQA R  +PPL + ++ L+K++SLA  
Sbjct: 107 VIRGAIESIPRGQWEAAYSLSMTRGQAMRRTVLPQAARVAVPPLANSFIALVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   ++      I   T + + +      IYL  S  ++     L  +  
Sbjct: 167 LTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSALSSLQVHLEKRFG 216



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +  G + T  L          +  +V   RL     +  + R YV + R  P L
Sbjct: 10  DSFWPLLHAGLMFTVPLTLLSFAAGLALAFVVALLRLFGPWPIVALMRFYVWLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV  + D       G  LN
Sbjct: 70  VQLFVIFYGLPSVGIVLDPLPAALIGFTLN 99


>gi|269963237|ref|ZP_06177571.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269832042|gb|EEZ86167.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 306

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 17/291 (5%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           G  +    L    L+A      V ++      V   + +K  + +L  P     LP+   
Sbjct: 17  GFFLSRFNLLDWVLLAICALAGVWLYHRSTVGVNYIWHWKEAIDLLFTPRADGGLPY--- 73

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-------LSRHFHEKTGKALPLLY 223
                      T+  +    +F+ VLG +L L            +  F +      PL++
Sbjct: 74  ----FFQGLISTLRLSLWGIIFALVLGTLLGLARFSDTVWLRTPANAFIQLVRNIPPLVF 129

Query: 224 ISTFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +  F  F    L+ +     L   +  +P   Q  F G + +     S  + +   ++A+
Sbjct: 130 VFIFYFFISNQLIPLLGLEDLLRNYRGEPNAVQHFFFGPANLWENLASGVLCVGLLSSAY 189

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE+VR+GL +V +GQ EAA +LGL+     R ++ PQ +++I P L  Q ++L+K++S+
Sbjct: 190 IAEVVRAGLQSVDKGQWEAADSLGLSRWVKYRFIIAPQVLKAITPALAGQTISLVKDTSI 249

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +   ++  VG  + N +G   EI LI  F+Y  +   +++F   +  K
Sbjct: 250 VSLISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMFFRYIEKK 300



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 30/55 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  L+  G+I A ++GTL+G  R S    +      ++++ RNIPPL
Sbjct: 73  YFFQGLISTLRLSLWGIIFALVLGTLLGLARFSDTVWLRTPANAFIQLVRNIPPL 127


>gi|182439547|ref|YP_001827266.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326780211|ref|ZP_08239476.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178468063|dbj|BAG22583.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326660544|gb|EGE45390.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 288

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 10/259 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R     VV+  L  ++ SV+        +    F     L    LT+   A + V  FVL
Sbjct: 35  RWTAAAVVLVLLALALNSVIRNDAFQWDVVLSYFGTVPVLRGLWLTLWLTAVVVVLGFVL 94

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G +L++      R       +A+   Y+  F     P LV +   + +    P   Q   
Sbjct: 95  GALLAVM-----RLSGNPVLQAVSWGYVWLF--RSTPILVQLLFWFNIGALYP---QILG 144

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +   ++        I L+ + AA+ AE+VR G+++V RGQ+EAA +LGL   +  R ++L
Sbjct: 145 VSTVSLLGPVTIAVIGLTLHEAAYAAEVVRGGILSVERGQVEAAQSLGLGPWRRFRRIVL 204

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQAMRSI+PP  +  +  LK +S+   +   DL+     + ++T Q I ++L+    Y +
Sbjct: 205 PQAMRSIVPPAGNMLIGTLKGTSIVSIIAVQDLLYSVQLVYHRTYQVIPLLLVATLWYAA 264

Query: 377 LSIMIALFMNRLNAKIALK 395
           ++ ++++    +    A  
Sbjct: 265 VTTLLSIGQRYVERYYARG 283



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 35/79 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    ++   ++G L+   RLS N ++  +   YV +FR+ P LV + F +
Sbjct: 74  LRGLWLTLWLTAVVVVLGFVLGALLAVMRLSGNPVLQAVSWGYVWLFRSTPILVQLLFWF 133

Query: 150 KSVLSVLPIPDHSIVLPFG 168
                   I   S V   G
Sbjct: 134 NIGALYPQILGVSTVSLLG 152


>gi|121592679|ref|YP_984575.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|222109459|ref|YP_002551723.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           ebreus TPSY]
 gi|120604759|gb|ABM40499.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax sp. JS42]
 gi|221728903|gb|ACM31723.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax ebreus TPSY]
          Length = 260

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/189 (33%), Positives = 94/189 (49%), Gaps = 11/189 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +   YI    I G P LV I   Y   F  PVL            P+F +
Sbjct: 81  RTSRLAWLRWVASFYIWA--IRGTPLLVQILFVY---FALPVLVP------GLNLPDFAA 129

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL     A+ AE +R+GL+AVPRGQ EAA ALGL+       V+ PQA +  +PPL 
Sbjct: 130 AVVALGLNVGAYNAEAIRAGLLAVPRGQTEAARALGLSRTHVFFDVVFPQAFKIALPPLV 189

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S ++ LLK+SSLA A+G  +L +VG  I + T Q +  +      YL L+ ++    + +
Sbjct: 190 SNFVALLKDSSLAYAIGVVELTNVGNRIQSATFQPVATLTTVAITYLILTTLVTQVTHAI 249

Query: 389 NAKIALKEK 397
             +  ++ +
Sbjct: 250 EYRFDVEGR 258



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 31/78 (39%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               S A     G + T +L         ++GT     R S    + W+   Y+   R  
Sbjct: 43  EPIGSNAELFSEGALTTLYLTLVSGTVGLLLGTAAALARTSRLAWLRWVASFYIWAIRGT 102

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV I F+Y ++  ++P
Sbjct: 103 PLLVQILFVYFALPVLVP 120


>gi|300313167|ref|YP_003777259.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075952|gb|ADJ65351.1| ABC-type amino acid transport system, permease protein
           [Herbaspirillum seropedicae SmR1]
          Length = 216

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 18/231 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L     T+  +   FVF  V G V++L+     R       + +   YI  
Sbjct: 4   FSFLHVEYLLQAAVWTVVLSLVAFVFGGVAGFVIALW-----RVSPNAVLRGIASGYIQ- 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G+P LV++ + Y           F            ++  I+ + Y AAF+ EI R
Sbjct: 58  -VVQGIPLLVILFVAY-----------FGLAIAGFKLTPLVAAGISFAIYCAAFLGEIWR 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + AVP+ Q EA+  LG    +    V+LPQA++   PP     + ++KN+SLA  +GF
Sbjct: 106 GCIQAVPKTQWEASECLGFNRFEQLTKVILPQAVKIATPPTVGFMVQIVKNTSLASVIGF 165

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL   G  I N T Q   +      IY  L   ++        K+ +  +
Sbjct: 166 VDLSRAGQIINNSTFQPFTVFGCVALIYFCLCFPLSALSKHFERKLNVSHR 216



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L   V T  L+    +   + G ++   R+S N ++  I   Y++V + IP LV+
Sbjct: 8   HVEYLLQAAVWTVVLSLVAFVFGGVAGFVIALWRVSPNAVLRGIASGYIQVVQGIPLLVI 67

Query: 145 IFFLYKSV 152
           +F  Y  +
Sbjct: 68  LFVAYFGL 75


>gi|254512979|ref|ZP_05125045.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11]
 gi|221532978|gb|EEE35973.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11]
          Length = 293

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 11/281 (3%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
                 I  V +  F  I   +     YK    ++P            +  N  L     
Sbjct: 9   KWPDYVIVAVLIAFFGYIWFAIEGTLNYKWRWELIPGYIIGWHSGREEYFANLLLQGLVA 68

Query: 182 TMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           T+  +    + + +LG +L +         R+    + +  + +P + +     F L   
Sbjct: 69  TVRISIYSGILALLLGTILGVARCSANLTIRMLARTYLEFLRNVPPVVVVFIFFFFLSQQ 128

Query: 236 VLIAL-----KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           ++ AL        +   +       F G     P  +S  I L+ + +AF+ EIVR+G+ 
Sbjct: 129 LIDALNLERWARGIARQEDNQIWTFFFGEMRRFPSLISGVIVLALFESAFVGEIVRAGIQ 188

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA ++G++  +  R V+LPQAM+ ++PPL +Q+++L+K+SS+   +   +L 
Sbjct: 189 SIPKGQREAARSIGMSRLQELRYVVLPQAMKKVVPPLANQFISLIKDSSILSLISVQELT 248

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                ++  +    E  +     Y  +   ++    RL  +
Sbjct: 249 YKTVELVASSRMIFEAWITTAAFYFVVCFGLSRIFARLEKR 289



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 2/147 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  ++    I A ++GT++G  R SAN  +  + R Y+E  RN+PP+VV+F  
Sbjct: 62  LLQGLVATVRISIYSGILALLLGTILGVARCSANLTIRMLARTYLEFLRNVPPVVVVFIF 121

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +   L    +      G+        +     +      + S V  IVL+LF +   
Sbjct: 122 FFFLSQQLIDALNLERWARGIARQEDNQIWTFFFGEMRRFPSLISGV--IVLALFESAFV 179

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTL 235
                   +++P          G+  L
Sbjct: 180 GEIVRAGIQSIPKGQREAARSIGMSRL 206


>gi|190150935|ref|YP_001969460.1| amino-acid ABC transporter permease protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307264289|ref|ZP_07545878.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189916066|gb|ACE62318.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|306870353|gb|EFN02108.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 238

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 13/245 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +++L  +P  D + V            +   +++      F+    + + ++L     
Sbjct: 1   MLENLLLQIPFMDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +   A+  +YIS  +I G P LV I++ +                         
Sbjct: 61  VNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY-----------GLPAIGVYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R +IPPL
Sbjct: 108 AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVVIPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++ L   +
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAK 227

Query: 388 LNAKI 392
           L  + 
Sbjct: 228 LERRF 232


>gi|148652957|ref|YP_001280050.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148572041|gb|ABQ94100.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 245

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 99/216 (45%), Gaps = 13/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             ++      F+    + +V++L      +    K    L  +Y+S   I G P LV + 
Sbjct: 40  YYSIPLAIASFIIGMAIALVVALIRVVPRQALWHKIAYRLARIYVSA--IRGTPMLVQLF 97

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  IA S    A+ +E VR+ ++++P+GQ EA
Sbjct: 98  IIFY-----------GLPSVGVMLEPFPAAIIAFSLNIGAYASETVRASILSIPKGQWEA 146

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
              +GLT+ ++ R V+LPQA+R  +PPL++ +++L+K++SLA  +   ++      I  +
Sbjct: 147 GATVGLTYLQSFRHVILPQALRVSVPPLSNTFISLVKDTSLASLILVTEMFKQAQIITAR 206

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + + +      IY  + + ++    RL  ++   
Sbjct: 207 NYEFMLVYTEAALIYWVICLALSAVQGRLETRLDRY 242


>gi|298290195|ref|YP_003692134.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926706|gb|ADH87515.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 222

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 18/221 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L+   L +  +    + S+  G++ +L      +       +     YI    I G PT
Sbjct: 19  FLAASWLVLVLSLLAILVSWGCGLIAAL-----GKVSRFAALRKASEFYIWF--IRGTPT 71

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ I + Y   F  P L              F++  +AL     A++AEIVR+GL A+P+
Sbjct: 72  LIQIFIIY---FGLPQL--------GLRLSPFVAGVVALGFNGGAYVAEIVRAGLSAIPK 120

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+A ALG+   +    ++LPQ  R I+PP+T++ + ++KN+SL   +   +L     
Sbjct: 121 GQTESAQALGMGRWQMMTRIILPQVFRVILPPVTNEAITMVKNTSLLSTITVVELTLYSQ 180

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           TII  T +  E  +    IYL ++ +I+          A  
Sbjct: 181 TIIATTFRPFEFYIATALIYLVMTSLISQAAAHAERHYARS 221


>gi|326202620|ref|ZP_08192488.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter, inner
           membrane subunit [Clostridium papyrosolvens DSM 2782]
 gi|325987204|gb|EGD48032.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter, inner
           membrane subunit [Clostridium papyrosolvens DSM 2782]
          Length = 221

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 9/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +          I + + +LG+++      L +  H K  KA+   YI    I G P 
Sbjct: 9   YWYYFVSGTANTIVIAILTVILGVIIGTVI-ALMKISHNKVLKAVASSYIEF--IRGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L + L    P    F           F+   IA+S  + A++AEI+R+G+ AV +
Sbjct: 66  LVQITLFFYL-ISLPEFHIFGL-----ELERFIPGVIAMSVNSGAYVAEIIRAGIQAVDK 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA ++G TH +A R ++LPQA+R+I+P L ++++ ++K SS+   +  ++L+    
Sbjct: 120 GQMEAARSIGFTHGQAMRYIVLPQALRNILPALGNEFVVVIKESSVLSVISISELMRNTN 179

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I     +  E + I   IY  L+  +   +     ++   +
Sbjct: 180 IIQGAIYRPFEPLAITAIIYFLLTFSLTRLLGYAERRMRTSD 221



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 39/91 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  S Y    + G  NT  +A   +I   IIGT++   ++S NK++  +   Y+E  
Sbjct: 1   MDFSFLSEYWYYFVSGTANTIVIAILTVILGVIIGTVIALMKISHNKVLKAVASSYIEFI 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           R  P LV I   +  +           +  F
Sbjct: 61  RGTPLLVQITLFFYLISLPEFHIFGLELERF 91


>gi|258404611|ref|YP_003197353.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257796838|gb|ACV67775.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 293

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 10/260 (3%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-- 204
             YK    V+P          G ++ N  L     T+  +    + +  +G+V+ LF   
Sbjct: 34  LAYKWQWEVIPQYLVRYDEQAGHWVPNLLLQGLLTTIRLSFWSTLLATCIGVVMGLFRVS 93

Query: 205 ----TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
                RL    +    + LP L +   L +     +L +L  Q    +        I   
Sbjct: 94  PSLFKRLIAQSYVVLSRNLPPLVLVFLLYYFFSDQLLPSLGLQEMVGRFPPLAQKIIALV 153

Query: 261 TVSPE----FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
              P      +S  + L+ Y  A+I EIVRSG+ ++ RGQ EAA ALGL+  +  R V+L
Sbjct: 154 FAEPAQLMTTISAVVTLALYEGAYITEIVRSGIQSIERGQWEAAYALGLSKFEQLRYVIL 213

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R +IPPLT Q+++ +K+S++   +   +L   G  ++  T    E+ +    +Y  
Sbjct: 214 PQAVRRVIPPLTGQFISTIKDSAIVSVISVPELTFQGMELMAATYLTFEVWITVTVLYFL 273

Query: 377 LSIMIALFMNRLNAKIALKE 396
           L+   +L   R+   +  ++
Sbjct: 274 LTFSCSLLARRIEVFLQKRD 293



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 13/126 (10%)

Query: 29  VQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYA-- 86
              +   ++     W ++N    +          +  E     I Q +V Y   + +   
Sbjct: 11  FDTLFLAVVVGGGSWLLHNAATELA-------YKWQWEV----IPQYLVRYDEQAGHWVP 59

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G + T  L+F   + AT IG ++G  R+S +     I + YV + RN+PPLV++F
Sbjct: 60  NLLLQGLLTTIRLSFWSTLLATCIGVVMGLFRVSPSLFKRLIAQSYVVLSRNLPPLVLVF 119

Query: 147 FLYKSV 152
            LY   
Sbjct: 120 LLYYFF 125


>gi|16079453|ref|NP_390277.1| High affinity arginine ABC transporter permease [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221310317|ref|ZP_03592164.1| hypothetical protein Bsubs1_13151 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314641|ref|ZP_03596446.1| hypothetical protein BsubsN3_13072 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319564|ref|ZP_03600858.1| hypothetical protein BsubsJ_12993 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323840|ref|ZP_03605134.1| hypothetical protein BsubsS_13122 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321311878|ref|YP_004204165.1| High affinity arginine ABC transporter permease [Bacillus subtilis
           BSn5]
 gi|1731063|sp|P54536|ARTQ_BACSU RecName: Full=Arginine transport system permease protein ArtQ
 gi|1303950|dbj|BAA12605.1| YqiY [Bacillus subtilis]
 gi|2634831|emb|CAB14328.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|291484835|dbj|BAI85910.1| hypothetical protein BSNT_03567 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320018152|gb|ADV93138.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis BSn5]
          Length = 219

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + F    +    KI V S ++G++L +    L +    +    +   Y 
Sbjct: 1   MNLDFSATIPQIPFILEGLAITLKIVVVSAIIGLILGIVL-SLCKISTFRPFIWIADFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + + Y   F  P L  F          +F +  +ALS  +AA+++EI
Sbjct: 60  SVF--RGTPLVLQLMIVY---FGLPQLLGFQI-------DQFWAAVVALSLNSAAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ A+ +GQ EAA+ALG+ + K  + +LLPQA ++I P + ++ + L K S++   +
Sbjct: 108 IRAGINAIDKGQKEAAVALGVPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  D++         T   +E ++I   IY  L +++      +  K+ 
Sbjct: 168 GLGDVMRRAYQAGAATYNYLEPLIIAGLIYYVLVLILTFIGKAVERKLK 216



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 34/88 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++       IL G   T  +     I   I+G ++   ++S  +   WI   Y  VF
Sbjct: 3   LDFSATIPQIPFILEGLAITLKIVVVSAIIGLILGIVLSLCKISTFRPFIWIADFYTSVF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           R  P ++ +  +Y  +  +L        
Sbjct: 63  RGTPLVLQLMIVYFGLPQLLGFQIDQFW 90


>gi|167836531|ref|ZP_02463414.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 194

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 81/150 (54%)

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F           F+S  +AL+  T A+ +EI+R+GL AVP GQ EA+ A+GL+  
Sbjct: 44  PSFFYFGLPSAHVTLSSFLSSVLALAWCTGAYTSEIIRAGLQAVPHGQREASYAIGLSEV 103

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              RL+++PQ +R  IPPL    + +L+ +SL   V   +LV+    I N+T   + +++
Sbjct: 104 DTLRLIIVPQGLRVSIPPLLGFGVIMLQTTSLCFTVALPELVTKAQQIGNETFLYMPVLI 163

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   +Y ++ +   L ++ L  +++  E +
Sbjct: 164 LAALLYTAICVPSTLLVSSLERRLSRHEAR 193


>gi|153832989|ref|ZP_01985656.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01]
 gi|148870710|gb|EDL69616.1| amino acid ABC transporter, permease protein [Vibrio harveyi HY01]
          Length = 306

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 17/291 (5%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           G  +    L    L+A      V ++      V   + +K  + +L  P     LP+   
Sbjct: 17  GFFLSRFNLLDWVLLAICALAGVWLYHRSTVGVNYIWHWKEAIDLLFTPRADGGLPY--- 73

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLY 223
                      T+  +    VF+ VLG +L L     S          +       PL++
Sbjct: 74  ----FFQGLISTLRLSVWGIVFALVLGTLLGLARFSDSVWLRTPANAFIQLVRNIPPLVF 129

Query: 224 ISTFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +  F  F    L+ +     +   +  +P   Q  F G + +     S  + +   ++A+
Sbjct: 130 VFIFYFFISNQLIPLLGLEDILRNYRGEPNAVQSFFFGPANLWENLASGVLCVGLLSSAY 189

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE+VR+GL ++ +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+
Sbjct: 190 IAEVVRAGLQSIDKGQWEAADSLGLSSWVKYRFVIAPQVLKAITPALAGQTISLVKDTSI 249

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +   ++  VG  + N +G   EI LI  F+Y  +   +++F   +  K
Sbjct: 250 VSLISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMFFRYIEKK 300



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 31/55 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  L+  G++ A ++GTL+G  R S +  +      ++++ RNIPPL
Sbjct: 73  YFFQGLISTLRLSVWGIVFALVLGTLLGLARFSDSVWLRTPANAFIQLVRNIPPL 127


>gi|146284417|ref|YP_001174570.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145572622|gb|ABP81728.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|327482802|gb|AEA86112.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 229

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   S + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPSFIDGAWLTLQLVGVSVITGLILAVPLG-IARSSRHLAVRALPYGYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        + QF+ +  S + P     +    I ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GMAQFDIVRQSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP G++EAA ALG++  +A   ++LP+A R  +P  +++ + +LK S+LA  +   +L 
Sbjct: 120 NVPHGEVEAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   I  +T    E+ L    IYL ++ ++      L   + +
Sbjct: 180 GMARKIAARTYLHEEMFLTAGLIYLLIAFVLMQGFKLLERWLRV 223



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  + + G   T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPSFIDGAWLTLQLVGVSVITGLILAVPLGIARSSRHLAVRALPYGYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +   ++   
Sbjct: 69  LFLVYYGMAQFDIVRQSALWPY 90


>gi|66048138|ref|YP_237979.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63258845|gb|AAY39941.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330900968|gb|EGH32387.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330939296|gb|EGH42691.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330970704|gb|EGH70770.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
 gi|330980615|gb|EGH78718.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 229

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAI-PMGIARASRHWPVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF  +  S + P     F    + ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 120 AVPPGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T   +EI       YL ++ ++      L   + +
Sbjct: 180 GMARTIIARTYLPVEIFFAAGMFYLVMTFVLVQGFRLLEKLLRV 223



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAIPMGIARASRHWPVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +   ++   
Sbjct: 69  LFLVYYGLAQFESVRQSALWPY 90


>gi|183602519|ref|ZP_02963884.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683563|ref|YP_002469946.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190593|ref|YP_002967987.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195999|ref|YP_002969554.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218160|gb|EDT88806.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219621213|gb|ACL29370.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240248985|gb|ACS45925.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250553|gb|ACS47492.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793580|gb|ADG33115.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 328

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 12/264 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  ++V+ F    V  ++  P     + +    N R L     T      + V S V+  
Sbjct: 30  VAAIIVVIFAAMIVKGLITNPRFEWNVVWKYLFNERVLEGVGYT----LLLTVISMVV-A 84

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-G 252
           ++      + R       + +   YI  F    + T ++    +      L    P+   
Sbjct: 85  IVLAVVLAVMRKSVNPVLRGVSWFYIWFFRGTPVYTQLVFWGLFAVLIPRLSLGIPLTSV 144

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F  I    +   F + +I L+   AA++AEIVR+GL AV  GQ EAA ALG+      R
Sbjct: 145 EFWSIDSQAIITAFNAAWIGLALNEAAYLAEIVRAGLDAVDPGQEEAAKALGMKRSMIMR 204

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
            V+LPQAMR IIPP  ++ + +LK +SL +AV F  DL      I N+  + I ++L+  
Sbjct: 205 RVILPQAMRIIIPPTGNETIGMLKTTSLVLAVPFTLDLQYATNAIANRIYKPIPLLLVAS 264

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
             YL ++ ++ +  + L       
Sbjct: 265 IWYLFITSILMVIQSMLEKHFGRG 288



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 21/128 (16%)

Query: 30  QIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAI 89
           QI+ A+++ +     V  +  N  +   ++   +L                        +
Sbjct: 28  QIVAAIIVVIFAAMIVKGLITN-PRFEWNVVWKYLFNER--------------------V 66

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L    M+ A ++  ++   R S N ++  +   Y+  FR  P    + F  
Sbjct: 67  LEGVGYTLLLTVISMVVAIVLAVVLAVMRKSVNPVLRGVSWFYIWFFRGTPVYTQLVFWG 126

Query: 150 KSVLSVLP 157
              + +  
Sbjct: 127 LFAVLIPR 134


>gi|150391392|ref|YP_001321441.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
 gi|149951254|gb|ABR49782.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus metalliredigens QYMF]
          Length = 227

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 14/213 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++  FS +LG V  L AT L     +   KA+    I   ++ G P L+ +   +Q 
Sbjct: 29  LTLQLSFFSILLGTVFGLLATMLKMTKIKPLMKAI---DIYISVVRGTPLLLQLIFIFQ- 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F+S  I L+ +  A+I+EI R  + ++  GQ EAA ALG
Sbjct: 85  ----------ALPEIGIKLSPFISAVIGLAFHNGAYISEIFRGAIESIDYGQKEAASALG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +A + V LPQA +  +P L +Q++  +K+SSLA  +   + + +       T    
Sbjct: 135 MTKWQAMKRVTLPQAFKRSVPSLGNQFIIAIKDSSLASVITITETLMLTRQYTAATFNPW 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  I    Y+ ++ +++  + ++ A++ + E+
Sbjct: 195 PMYFIAGSYYMIITTVLSKGLLKIEARLKVYER 227



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 41/90 (45%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++A   L G   T  L+F  ++  T+ G L    +++  K +     +Y+ V R  P L+
Sbjct: 18  TFAPKFLPGVKLTLQLSFFSILLGTVFGLLATMLKMTKIKPLMKAIDIYISVVRGTPLLL 77

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            + F+++++  +       I    G+  +N
Sbjct: 78  QLIFIFQALPEIGIKLSPFISAVIGLAFHN 107


>gi|229188846|ref|ZP_04315880.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 10876]
 gi|228594659|gb|EEK52444.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 10876]
          Length = 218

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  +DL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGSDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|326333120|ref|ZP_08199369.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
 gi|325949103|gb|EGD41194.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
          Length = 322

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 25/291 (8%)

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           L+GA  ++  K   WI  V           +V+  +   V S++  P +   +    FL 
Sbjct: 21  LLGARLVARRKPGQWISAV-----------LVLLVVAGIVKSLVTNPRYHWDVVGAFFLR 69

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    LT+   A + V S++LGIVL++      R        ++  +YI  F     
Sbjct: 70  PSILDGLVLTLWLTAAVLVSSYLLGIVLAVM-----RLSTNPVLSSVSAVYIWFFRSVPP 124

Query: 233 PTLVLIALKYQ-------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L+ +   +Q       +    P L  F  I  + +    ++ ++ L+   AAF AEI+
Sbjct: 125 --LLQLLFWFQMASLYPQISLGIPFLKPFVTIETAHLFSGLLAAFVGLTFDIAAFAAEII 182

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL++V  GQ EAA ALGL+  +    ++LPQAM +IIP   +  + LLK +S+   + 
Sbjct: 183 RGGLVSVEAGQTEAAKALGLSKARIFWRIVLPQAMPAIIPASGNLLIGLLKGTSIVSVIA 242

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             DL+     I  Q    I ++L+    YL L  +++     +    A  +
Sbjct: 243 VQDLLYSVQLIYAQNYLVIPLLLVATIWYLILVTVLSTIQFFVERYYARGK 293



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 50/113 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G V T WL  + ++ + ++G ++   RLS N +++ +  VY+  FR++PPL+ + F 
Sbjct: 72  ILDGLVLTLWLTAAVLVSSYLLGIVLAVMRLSTNPVLSSVSAVYIWFFRSVPPLLQLLFW 131

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++       I      L   + +    L    L         + +F   I+  
Sbjct: 132 FQMASLYPQISLGIPFLKPFVTIETAHLFSGLLAAFVGLTFDIAAFAAEIIRG 184


>gi|222150112|ref|YP_002551069.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737094|gb|ACM38057.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 274

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 2/194 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R +  F+ +  + +P+L +  ++ F           Y       V   +        
Sbjct: 79  IVLRQAARFYIEIVRGIPVLVLLFYVAFVGA--PGFVALYNTLTAPLVSTGWLEPLQVRD 136

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                    AL    +AFIAEI R+G+ ++ +GQ+EAA +LGL   +  RLV+LPQA+R 
Sbjct: 137 VSLMWRAIFALCIGYSAFIAEIFRAGIESIDKGQIEAAKSLGLNRTQRFRLVILPQAIRV 196

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I PPL++ ++ ++K+SSL   +G AD+   G    + + +  E   I  +IYL L+I ++
Sbjct: 197 IFPPLSNDFVAMVKDSSLVSVLGVADISQAGKIYASGSFRFFETYSIVAYIYLILTIGLS 256

Query: 383 LFMNRLNAKIALKE 396
           L + R+  ++  ++
Sbjct: 257 LILRRVEKRMRSRD 270


>gi|148545553|ref|YP_001265655.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148509611|gb|ABQ76471.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 229

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 13/226 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L           ++   + V G++L++    ++R       +A+P  YI  F   G 
Sbjct: 7   FKWLPRLAEGAVLTLELVAIAVVAGLILAIPLG-IARSSRHWYVRAVPFSYIFFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  
Sbjct: 64  PLLVQLFLVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGA 117

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+P+G++EAA ALG++  K    ++LP+A R  +P  +++ + +LK S+LA  V   +
Sbjct: 118 LQAIPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLE 177

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  +  TII +T   +EI       YL +S M+      L   + +
Sbjct: 178 LTGMARTIIARTYLPVEIFFAAGVFYLVISFMLVQGFKLLERWLRV 223



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L    ++   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAEGAVLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 69  LFLVYYGLAQFD 80


>gi|322388196|ref|ZP_08061800.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus infantis ATCC 700779]
 gi|321140868|gb|EFX36369.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus infantis ATCC 700779]
          Length = 227

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +     ++    K       LYI  F   G 
Sbjct: 7   PKYLPYFNYGAVVTIIISILVVFLGTILGVLL-AFAQRSKIKPLAWFANLYIWVF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +         +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHISAPTIQIGILD--VDLTRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPSLGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ L +     ++   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTLALKAFENRMGQGDKK 227



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 32/76 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G L+   + S  K +AW   +Y+ VFR  P +V 
Sbjct: 9   YLPYFNYGAVVTIIISILVVFLGTILGVLLAFAQRSKIKPLAWFANLYIWVFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHISAPTIQ 84


>gi|225029008|ref|ZP_03718200.1| hypothetical protein EUBHAL_03300 [Eubacterium hallii DSM 3353]
 gi|224953670|gb|EEG34879.1| hypothetical protein EUBHAL_03300 [Eubacterium hallii DSM 3353]
          Length = 243

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 25/239 (10%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-----------SRHFHEKTGKA 218
           F+ ++   + T  +    ++   + +LG+VL      +           S+ F     K 
Sbjct: 16  FIADQRWKYITDGLKVTLEVTFLALILGLVLGAVIAVIRTTHDQLKEDQSKGFGSFLIKL 75

Query: 219 LPLLY-ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             L+  +   +I G PT+V + + +             FI  ++ + + M   I     +
Sbjct: 76  ADLICRVYLTVIRGTPTMVQLLIMF-------------FIVLASSNNKVMVAVITFGVNS 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AEI RSG+++V +GQMEA  +LGL +      +++PQA+++ +P L ++ + LLK 
Sbjct: 123 GAYVAEIFRSGIMSVDKGQMEAGRSLGLGYTDTMLQIIMPQAIKNCLPALVNEMITLLKE 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +S+   +G  +L   G  I   T  A+  +LI   IYL + +     M +L  ++   +
Sbjct: 183 TSICGYIGLNELTRGGDIIRGITYDAMMPLLIVAVIYLVIVMFFTWLMGKLERRLRESD 241


>gi|42783270|ref|NP_980517.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206976334|ref|ZP_03237242.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217961644|ref|YP_002340214.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|222097601|ref|YP_002531658.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1]
 gi|42739198|gb|AAS43125.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|206745530|gb|EDZ56929.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|217066079|gb|ACJ80329.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|221241659|gb|ACM14369.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1]
          Length = 219

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +  F+LG +L+L      R  +           + T +  G 
Sbjct: 13  PYILKGLEVTLKIVAVSALAGFLLGTLLALCKIARIRALNIAA-------DLYTSIFRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + + Y   F  P +  +         P F++  +A S  + A+++E++R+G+ AV
Sbjct: 66  PLVLQLMIIY---FGVPQIIGYEI-------PAFLAAVLAFSLNSGAYMSEVIRAGIQAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+  
Sbjct: 116 DKGQTEAAMALGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +T + +E +L    IY  L I++ L    +  ++   +
Sbjct: 176 AYIVGGETFKYLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 219



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++ +     IL G   T  +     +   ++GTL+   +++  + +     +Y  +F
Sbjct: 3   LDFSAITPSIPYILKGLEVTLKIVAVSALAGFLLGTLLALCKIARIRALNIAADLYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  V  +
Sbjct: 63  RGTPLVLQLMIIYFGVPQI 81


>gi|251791414|ref|YP_003006135.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540035|gb|ACT08656.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 221

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   + +   S  +  +     + + SF LG++L +    L R +  K  K +   Y
Sbjct: 1   MPSWLQLMADSFWSLLSAGLTFTVPLAILSFALGLMLGVLV-ALLRLYGPKPLKKICDFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  S    A+ +E
Sbjct: 60  V--WVIRGTPLLVQLFLIFY-----------GLPNAGITLDAFPAALIGFSLNVGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  +++VP+GQ  AA +LG++  +A R V++PQ++   +PPL + +++L+K++SLA  
Sbjct: 107 IVRGAILSVPKGQWNAAYSLGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I++ T + + + +    IYL  S +++    RL      
Sbjct: 167 ITVPEMFLAAQRIVSVTYEPLFLYIEAALIYLMFSTVLSKLQARLEKYYQR 217



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+ + +  G   T  LA        ++G LV   RL   K +  IC  YV V R  P 
Sbjct: 9   ADSFWSLLSAGLTFTVPLAILSFALGLMLGVLVALLRLYGPKPLKKICDFYVWVIRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + +     D       G  LN
Sbjct: 69  LVQLFLIFYGLPNAGITLDAFPAALIGFSLN 99


>gi|206577706|ref|YP_002238970.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|290512972|ref|ZP_06552336.1| octopine/nopaline transport system permease [Klebsiella sp. 1_1_55]
 gi|206566764|gb|ACI08540.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|289774585|gb|EFD82589.1| octopine/nopaline transport system permease [Klebsiella sp. 1_1_55]
          Length = 243

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 13/219 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F+ SF+LG  L+L    L R  H          YI  F   G P L+ + L Y 
Sbjct: 20  PVTLGLFICSFILGGALALGVLAL-RMSHWPLASGFAKGYILIF--RGSPLLIQLFLIYY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S + P     F+   +AL+  TAA+ AEI+R GL+A+P GQ+EA
Sbjct: 77  ------GLGQFGVIRHSFLWPLLREPFICAVLALALCTAAYTAEILRGGLLAIPPGQIEA 130

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 131 GQACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T + +E+ L    IYL L+ +I      L  ++    ++
Sbjct: 191 TYRTMEVFLCAAAIYLLLNFIIVQLYALLERRLTPHTRQ 229


>gi|116748260|ref|YP_844947.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116697324|gb|ABK16512.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 246

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 14/258 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R    L++   +       L      I  P+   +             T   I V +  
Sbjct: 1   MRTKYSLIIRVLIVLGTGGCLVFLFGRIEYPWNWRVPWEYRWLFFRGFYTTFIIAVGATS 60

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G  L +F   ++R       +   +LY+  F   G P L+ I + Y           F 
Sbjct: 61  MGFCLGVFGG-IARTSRSVLARETAMLYVEFF--RGTPLLIQIYIFY-----------FC 106

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                      +    +L+ ++ A+I E+VR+G+ ++ RGQ+EAA++ GL   +  R V+
Sbjct: 107 VAAAVHYDNPVIIGMFSLAVFSGAYITEMVRAGIESIDRGQIEAAMSTGLNDWETMRYVV 166

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQA R IIPP+  Q+++++K+SSL   +   +L      I   T +  E  L    +YL
Sbjct: 167 FPQAFRRIIPPVAGQFVSVIKDSSLLSVISVRELTKASEIINATTYKTFEAYLPLAALYL 226

Query: 376 SLSIMIALFMNRLNAKIA 393
            ++  ++    RL  KI 
Sbjct: 227 IITYPLSYLTQRLEQKIK 244



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 37/100 (37%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F   +    +     Y      GF  TF +A         +G   G  R S + L     
Sbjct: 25  FGRIEYPWNWRVPWEYRWLFFRGFYTTFIIAVGATSMGFCLGVFGGIARTSRSVLARETA 84

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            +YVE FR  P L+ I+  Y  V + +   +  I+  F +
Sbjct: 85  MLYVEFFRGTPLLIQIYIFYFCVAAAVHYDNPVIIGMFSL 124


>gi|292656557|ref|YP_003536454.1| putative glutamine ABC transporter permease [Haloferax volcanii
           DS2]
 gi|291370810|gb|ADE03037.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haloferax volcanii DS2]
          Length = 276

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 9/216 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           +I V   +L +   +F   L+R         +   Y+  F   G P L
Sbjct: 62  LPQFVDAYLLVLQIVVIGGILSVTAGVFVG-LARVSKTAITNGIATAYVQFF--RGTPLL 118

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             I + Y   F  P L    F      +  F +  IAL+   AA++ E VR G+ AVP G
Sbjct: 119 FQIFVIY---FGIPTLWPGTF---PVQNWGFPTAIIALTLNHAAYVGEAVRGGIGAVPDG 172

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LG+ + +  R V++PQA R+ +  + +  + L+K++SL   +   +L+    +
Sbjct: 173 QMEAARSLGMGYIQGMREVVVPQAWRNALAAIGNDQVILVKDTSLLTIIAIPELMQAFRS 232

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + + T      +++    YLS+++ +   +  L  +
Sbjct: 233 VNSATFDPWTPLVLVAIAYLSITLPLMRLVTYLEER 268



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 35/96 (36%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I    V +    +     +  ++    +   G I +   G  VG  R+S   +   I   
Sbjct: 48  IVATQVDFALMRTILPQFVDAYLLVLQIVVIGGILSVTAGVFVGLARVSKTAITNGIATA 107

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           YV+ FR  P L  IF +Y  + ++ P         F
Sbjct: 108 YVQFFRGTPLLFQIFVIYFGIPTLWPGTFPVQNWGF 143


>gi|229095293|ref|ZP_04226285.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-29]
 gi|229114242|ref|ZP_04243663.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-3]
 gi|228669262|gb|EEL24683.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-3]
 gi|228688152|gb|EEL42038.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-29]
          Length = 218

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GVTLNGFVAGTLTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYTRAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|114771230|ref|ZP_01448650.1| ABC-type glutamine transport system, permease component [alpha
           proteobacterium HTCC2255]
 gi|114548155|gb|EAU51042.1| ABC-type glutamine transport system, permease component [alpha
           proteobacterium HTCC2255]
          Length = 252

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 120/262 (45%), Gaps = 24/262 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
             +   FL     +V      +   P G       +S    T+  +      S  LG+++
Sbjct: 7   LCLAFIFLSGCSSNVWGWYVINPATPSGWINIKFLVSGIGNTILISIVAAFISINLGLLV 66

Query: 201 SL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +L         R+    + +  +++PLL +  ++ +GLP +                  F
Sbjct: 67  ALPGQSSRKGWRIINRVYVEFIRSIPLLPMLFWVFYGLPII------------------F 108

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +G +     F    I L+   +AF AEI RSG+ ++ +GQ EAA ++GLT+ +  R V
Sbjct: 109 KSMGLNIPIDPFWGAVITLAISDSAFTAEIYRSGIQSIAKGQKEAAHSIGLTYAQTMRYV 168

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R I+PPL +Q++ ++K S+ A  +G  +L      I+    + +EI  + +  Y
Sbjct: 169 ILPQAIRRILPPLANQFIYIVKMSAFASVIGMQELTRRANEIVVTEYRPLEIYSLLILEY 228

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
           L L ++I+  +  L  ++   E
Sbjct: 229 LVLVLIISAGVRWLERRMGSNE 250



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 35/79 (44%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S       ++ G  NT  ++      +  +G LV     S+ K    I RVYVE  R+IP
Sbjct: 33  SGWINIKFLVSGIGNTILISIVAAFISINLGLLVALPGQSSRKGWRIINRVYVEFIRSIP 92

Query: 141 PLVVIFFLYKSVLSVLPIP 159
            L ++F+++  +  +    
Sbjct: 93  LLPMLFWVFYGLPIIFKSM 111


>gi|187929866|ref|YP_001900353.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|187726756|gb|ACD27921.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
          Length = 222

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/163 (30%), Positives = 95/163 (58%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI+G+ T+ +  ++      +  L  F       + P F+   + L  Y+ A+++EIVR 
Sbjct: 51  LIYGICTVYVTFIRGTPLLVQLFLLFFGLPQFDILLPAFVCGVLGLGVYSGAYVSEIVRG 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +V RGQMEAA ++G++  ++ R ++LPQA+  +IPPL ++++ L+KNS+L   +   
Sbjct: 111 AIQSVDRGQMEAARSIGMSSAQSMRAIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIH 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           DL+  G  II+ + +++E+ L    +YL L+   +  ++RL  
Sbjct: 171 DLMHEGQKIISVSYRSLEVYLAIALVYLVLTSAASYLLHRLER 213


>gi|150377104|ref|YP_001313700.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150031651|gb|ABR63767.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 290

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 112/256 (43%), Gaps = 9/256 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++  L   ++    +                 L+    T+           VLG+V+++ 
Sbjct: 36  IVLLLLAGLVRAFSVGQIEWSYVRDFLFAPAILAGLYNTLLMTIAAMGVGIVLGVVIAIM 95

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGST 261
                R        ++ + Y+  F   G P L+ + L + L    P L            
Sbjct: 96  -----RISGNPVLSSIAIGYVWVF--RGAPALLQLMLWFNLALIFPTLGIPGLFEFRTVD 148

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   F++  + L     A+ +E+VRSGL++V  GQ EAA  +G+T     R ++LPQAMR
Sbjct: 149 VMTPFVAAVLGLGLSQGAYTSEVVRSGLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMR 208

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++PP+ ++ + ++K +SLA  + +++++     I     + +E++L+  F YL +  ++
Sbjct: 209 VMVPPVGNEVIGMVKLTSLASVIQYSEILHNAQIIYFANTRVLELLLVASFWYLLVVSVL 268

Query: 382 ALFMNRLNAKIALKEK 397
           ++  + +        K
Sbjct: 269 SVGQHYIERYFGRGSK 284



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q    Y  D  +A AIL G  NT  +  + M    ++G ++   R+S N +++ I 
Sbjct: 48  FSVGQIEWSYVRDFLFAPAILAGLYNTLLMTIAAMGVGIVLGVVIAIMRISGNPVLSSIA 107

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVL 153
             YV VFR  P L+ +   +   L
Sbjct: 108 IGYVWVFRGAPALLQLMLWFNLAL 131


>gi|116689574|ref|YP_835197.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|116647663|gb|ABK08304.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 230

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  +VL++   R S                L   Y+S  L+ G P LV I +
Sbjct: 26  VLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 83

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 84  IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 133 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAAT 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    +Y  L  ++         +++L  + 
Sbjct: 193 YQPLPLYLAAAAVYWVLCQILEWGQRWYEKRLSLPSRH 230


>gi|330469203|ref|YP_004406946.1| polar amino acid ABC transporter inner membrane subunit
           [Verrucosispora maris AB-18-032]
 gi|328812174|gb|AEB46346.1| polar amino acid abc transporter, inner membrane subunit
           [Verrucosispora maris AB-18-032]
          Length = 326

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 114/281 (40%), Gaps = 24/281 (8%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +   V+   +   V  ++     +             ++    ++       +   VL
Sbjct: 26  RWVAVAVIGVLVAMFVHLLVTNEAFNWSFMIDNMFRPPIMAGVRGSLALLVTSMLIGIVL 85

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LKYQLHFDKPVL 251
           G+V+++      R       + +   Y   F       L ++      L  ++ F  P  
Sbjct: 86  GVVIAIM-----RLSGNPILRGVAWAYTWFFRAVPRLVLAILFGNLGLLWSRIEFGLPFD 140

Query: 252 GQFNFIGGST-------------VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            Q   + G               +   F++  +AL    AA++AEIVR+G+ +V  GQ E
Sbjct: 141 RQIGALFGVQDFQARLFGFSARDLLTGFVAGMLALGLSEAAYMAEIVRAGIQSVDEGQTE 200

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTII 357
           AA ALG+T  +  R ++LPQAMR I+PP  ++ + +LK++SL   V    +L      + 
Sbjct: 201 AAQALGMTQGQILRRIVLPQAMRVIVPPTGNETIAMLKDTSLVAFVPVSTELFFQLRAVG 260

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++T Q   +++     YL LS ++ +    L    A    +
Sbjct: 261 SRTFQVFPMLVAATLWYLLLSSVLLVGQYYLERHFARGSGR 301



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   +  L  + M+   ++G ++   RLS N ++  +   Y   FR +P LV+    
Sbjct: 64  IMAGVRGSLALLVTSMLIGIVLGVVIAIMRLSGNPILRGVAWAYTWFFRAVPRLVLAILF 123

Query: 149 YKSVLSV 155
               L  
Sbjct: 124 GNLGLLW 130


>gi|319943563|ref|ZP_08017845.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319743378|gb|EFV95783.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 217

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 16/204 (7%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            + S  LG+ L+L   RLSRH           +    +L+ G P ++ +   Y      P
Sbjct: 26  LLLSIPLGVALALM--RLSRHRWLGV-----TVSGYLWLMRGTPLMLQLLFIYYALPLLP 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                   GG    P+F +  +A +   AA+ AEI R+G+ ++ RGQ E A  LG+ + +
Sbjct: 79  --------GGGIQLPDFPAAVVAFALNYAAYFAEIFRAGIQSIDRGQYEGAKVLGMNYPQ 130

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQ +R ++PPL+++++ L+K++SL   +   DL+     I+ +    I   ++
Sbjct: 131 TMRRIVMPQVIRRVLPPLSNEFITLVKDTSLIYVLALNDLLRAARGIVQRDF-TITPFIV 189

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL +++++      L  + A
Sbjct: 190 AAVFYLLMTLLLTWMFQSLEKRYA 213



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 31/75 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + +  L    ++ +  +G  +   RLS ++ +      Y+ + R  P ++ + F+Y +
Sbjct: 14  GSLVSLELFCITLLLSIPLGVALALMRLSRHRWLGVTVSGYLWLMRGTPLMLQLLFIYYA 73

Query: 152 VLSVLPIPDHSIVLP 166
           +  +          P
Sbjct: 74  LPLLPGGGIQLPDFP 88


>gi|297627443|ref|YP_003689206.1| polar amino acid ABC transporter, inner membrane component
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923208|emb|CBL57802.1| polar amino acid ABC transporter, inner membrane component
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 326

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 23/279 (8%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +    +   +   V S +  P       F        +              V + +
Sbjct: 30  WRWVAVAFIAVLVAMVVHSFVTNPRWDWASTFEFLFRPPIIEGLIKGT---ILGTVIAMI 86

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV------LIALKYQLHFDKP 249
           +G+ L +    L R       K     +   F       L+      LI L   +    P
Sbjct: 87  IGVGLGVLLAVL-RLSKNPVLKYASAGFTWFFRAIPRYVLLTILGVGLIYLYPTIDIGIP 145

Query: 250 VLGQFNFIGGSTVSPEFM------------SLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
              Q +   G      +                + L    +A++AEI R+G+++V  GQ 
Sbjct: 146 FGQQISHWLGLGWDMTWWHIDMRNVSSGIGIGALGLGLSESAYMAEIARAGIVSVDDGQT 205

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTI 356
           EAA ALG++HRK  R ++LPQAMR I+PP  ++++ ++K++SL  A+    +L      I
Sbjct: 206 EAAEALGMSHRKTMRRIVLPQAMRVIVPPTGNEFIAMIKDTSLLAAIPVGMELFYQATII 265

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            N+T + +   +     YL +  ++    + L  +    
Sbjct: 266 ANRTYKVMSAYVAATIWYLVVCSVLMFLQSLLEKRFGRG 304



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 20/151 (13%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           +    + V+    V++   N  + + +    FL       I +G++              
Sbjct: 33  VAVAFIAVLVAMVVHSFVTN-PRWDWASTFEFLFRP---PIIEGLI-------------- 74

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
               T       MI    +G L+   RLS N ++ +    +   FR IP  V++  L   
Sbjct: 75  --KGTILGTVIAMIIGVGLGVLLAVLRLSKNPVLKYASAGFTWFFRAIPRYVLLTILGVG 132

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           ++ + P  D  I     +          T  
Sbjct: 133 LIYLYPTIDIGIPFGQQISHWLGLGWDMTWW 163


>gi|224371143|ref|YP_002605307.1| ABC-type amino acid transport system, permease protein
           [Desulfobacterium autotrophicum HRM2]
 gi|223693860|gb|ACN17143.1| ABC-type amino acid transport system, permease protein
           [Desulfobacterium autotrophicum HRM2]
          Length = 293

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 122/254 (48%), Gaps = 10/254 (3%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y     V+P     +      ++    L+   +T+  +    + + V+G ++    +  S
Sbjct: 36  YNWQWEVIPQYLLRLDDATQKWVPGMILTGLFITLRISFWATLSALVIGTIMGAMKSGRS 95

Query: 209 RHF------HEKTGKALPLLYISTFLIFGLPTLV--LIALKYQLHFDKPVLGQF--NFIG 258
            +       + +T + +P++       + L  ++  L  L   ++ ++ +L QF   F+ 
Sbjct: 96  HYLKMVATAYVETIRNIPVIVWIFIFYYFLGDIIVPLTGLDRAVNMNEGLLRQFLTTFVS 155

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             ++ P F S   +L+ Y  A+  EI+R+G+ ++ +GQ EA+ +LG T  +  R V+LPQ
Sbjct: 156 DPSLLPVFFSATASLALYEGAYFTEIIRAGIESIEKGQWEASSSLGFTRFQQLRHVILPQ 215

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R ++PP+  Q ++ +K+SS+   +   +L   G  +++ T    E+ L  + +Y  + 
Sbjct: 216 ALRRMLPPMAGQIISTIKDSSIVSVISIQELTFQGMELMSATFLTFEVWLTILALYFIVC 275

Query: 379 IMIALFMNRLNAKI 392
              ++ +  +  ++
Sbjct: 276 FCCSMGVAAVERRL 289



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F   + A +IGT++GA +   +  +  +   YVE  RNIP +V IF  
Sbjct: 62  ILTGLFITLRISFWATLSALVIGTIMGAMKSGRSHYLKMVATAYVETIRNIPVIVWIFIF 121

Query: 149 YK 150
           Y 
Sbjct: 122 YY 123


>gi|307306804|ref|ZP_07586545.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306902095|gb|EFN32693.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 290

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 9/255 (3%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +  L+  ++    +                 L     T+           VLG+V+++  
Sbjct: 37  VLLLFAGLVRAFSVGQIEWSYVRDFLFAPAILVGLYNTLLMTVAAMGLGIVLGVVIAIM- 95

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTV 262
               R        ++ + YI  F   G P L+ + L + L    P L            V
Sbjct: 96  ----RISGNPVLSSIAIGYIWVF--RGAPALLQLMLWFNLALIFPTLGIPGLFEFRTVDV 149

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F++  + L     A+ +E+VRSGL++V  GQ EAA  +G+T     R ++LPQAMR 
Sbjct: 150 MTPFVAAVLGLGISQGAYTSEVVRSGLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMRV 209

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PP+ ++ + ++K +SLA  + +++++     I     + +E++L+  F YL +  +++
Sbjct: 210 MVPPVGNEVIGMVKLTSLASVIQYSEILHNAQIIYFANTRVLELLLVASFWYLLVVSVLS 269

Query: 383 LFMNRLNAKIALKEK 397
           +  + +        K
Sbjct: 270 IGQHYIERYFGRGSK 284



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 41/84 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q    Y  D  +A AILVG  NT  +  + M    ++G ++   R+S N +++ I 
Sbjct: 48  FSVGQIEWSYVRDFLFAPAILVGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSSIA 107

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVL 153
             Y+ VFR  P L+ +   +   L
Sbjct: 108 IGYIWVFRGAPALLQLMLWFNLAL 131


>gi|206577408|ref|YP_002239112.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288936013|ref|YP_003440072.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290512818|ref|ZP_06552183.1| amino acid ABC transporter [Klebsiella sp. 1_1_55]
 gi|206566466|gb|ACI08242.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288890722|gb|ADC59040.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289774701|gb|EFD82704.1| amino acid ABC transporter [Klebsiella sp. 1_1_55]
          Length = 241

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 12/231 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-LPLLYISTF 227
           M ++     F +      A + +   +  ++  +    +     E   +A   L +   +
Sbjct: 1   MSIDLMWQYFLSPEFIRGAWMTLLITLCSLLCGVVLGLVLALLQEAPFRAGKGLAFFYLW 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L  G P L  I   Y +             G       F    +ALS    A++AEI+RS
Sbjct: 61  LFRGTPVLFQIIFVYNV-----------LPGFGLRFSAFTCAVLALSLNEGAYMAEILRS 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL AV  GQ  A +ALG+TH +  R ++LPQA R ++PP+ +Q +++LK+S+L   +   
Sbjct: 110 GLQAVKSGQRTAGMALGMTHGQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQ 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+ V     + + +  E +      YL L+ +  +F + L   +  ++++
Sbjct: 170 ELLLVANQAASASFRYFEALCAAGIYYLLLTSLFMIFQSWLERVLDPRQRR 220


>gi|76801539|ref|YP_326547.1| glutamine/glutamate/polar amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76557404|emb|CAI48981.1| ABC-type transport system permease protein II 2 (probable
           substrates glutamine/glutamate/polar amino acids)
           [Natronomonas pharaonis DSM 2160]
          Length = 325

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 4/235 (1%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
               L   +      +            + V     GI +++    ++R +  +  + L 
Sbjct: 83  WLAWLFDFIAFGVTVMPALAAGAWLTIVLTVLGMFFGIFIAVPL-SVARVYGSRPLRWLS 141

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAA 279
           L Y    LI G P L  + + Y       ++ +   +G G           I  +  ++A
Sbjct: 142 LAYTE--LIRGTPLLAQLFVLYYGLPLSGIIRELPGVGVGPVPRAAVWVAVIGFTINSSA 199

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AE +RS L +V  GQ+ AA ++GL+  ++ R V+LPQ +R  IP  T++++ L+K SS
Sbjct: 200 YQAEYIRSALQSVDAGQLTAARSVGLSKTESIRHVILPQGLRYAIPGWTNEFIYLIKYSS 259

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LA  +   +L      I + T + +E+ LI    YL+L + +++ M+    ++A+
Sbjct: 260 LAAFIAVPELFRRARNIGSDTFRYLEMYLIVALFYLALVLTLSVLMDSFEKRVAI 314


>gi|170732878|ref|YP_001764825.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169816120|gb|ACA90703.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 230

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  +VL++   R S                L   Y+S  L+ G P LV I +
Sbjct: 26  VLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 83

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 84  IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 133 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAAT 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    +Y  L  ++         +++L  + 
Sbjct: 193 YQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPSRH 230


>gi|53729251|ref|ZP_00133781.2| COG0765: ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209068|ref|YP_001054293.1| amino acid ABC transporter permease [Actinobacillus
           pleuropneumoniae L20]
 gi|126097860|gb|ABN74688.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
          Length = 227

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 13/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L           +   A+  +YIS  +I G P LV I++ + 
Sbjct: 26  PLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E VR+ + +VP+GQ EA   +
Sbjct: 84  -----------GLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA+R +IPPL++ ++ L K++SLA  V   ++  V   + N +   
Sbjct: 133 GMTYMQTFRRIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDF 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + + +    IY     ++ L   +L  + 
Sbjct: 193 LPVYIEAGLIYWCFCWVLFLIQAKLERRF 221


>gi|322833421|ref|YP_004213448.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168622|gb|ADW74321.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 249

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 9/234 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YI 224
            F +  +N  L              + + ++ ++  LFA  +              L + 
Sbjct: 4   MFTILHDNGMLFLMGQYPQGPLGGILCTLLISLLAVLFALPVGILLGLARLSPFRWLSWP 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +   ++GL  + L+ + +  +F  P+L   N  G       F ++   L  Y +A+IAEI
Sbjct: 64  AACWVYGLRGIPLLMVVFWTYFCVPLLIGHNISG-------FSTMLCTLVIYESAYIAEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR G+ A+P GQ EAA ALG+++ K  RL++LPQA+ + +P L SQ ++++K+S+L   +
Sbjct: 117 VRGGIQALPGGQYEAARALGMSYFKTLRLIILPQALYNTLPSLVSQLVSIIKDSTLGYVI 176

Query: 345 GFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L      + NQ   +  ++  I    Y  +   +    N+L A+I  K +
Sbjct: 177 NVPELTFAANQVNNQLLTKPFQVFAIVAIGYYIICFSLTWLANKLEARITRKRQ 230



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  ++   ++ A  +G L+G  RLS  + ++W    +V   R IP L+V+F+ Y
Sbjct: 25  LGGILCTLLISLLAVLFALPVGILLGLARLSPFRWLSWPAACWVYGLRGIPLLMVVFWTY 84

Query: 150 KSVLSVLPIPDHSIVLP 166
             V  ++          
Sbjct: 85  FCVPLLIGHNISGFSTM 101


>gi|304395807|ref|ZP_07377690.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357101|gb|EFM21465.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 246

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F+ +F+ G VL++    L R    +   A    YI  F   G P ++ + L Y 
Sbjct: 19  PVTLGLFISAFLCGGVLAVGILAL-RMSRWRLLSAFARGYILVF--RGSPLMIQLFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S   P     F    +ALS  TAA+ AEI+R  L+AVP GQ+EA
Sbjct: 76  ------GLGQFGVIRHSVFWPFLREPFTCAVLALSLCTAAYTAEILRGALLAVPPGQVEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GMACGMSRGLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T + +E+ L    IYL L+ +I      L  ++    K
Sbjct: 190 TYRTMEVFLCAAAIYLILNFIIVQLYALLERRLTPVHK 227


>gi|167580938|ref|ZP_02373812.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis TXDOH]
          Length = 219

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 98/221 (44%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P
Sbjct: 9   HTLPILARGAILTMKFAVASMVLGLIVGLVV-AIVRIGNNRFLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y                         +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYY-----------GLPDIGISLDPTSAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHAQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T   A + M+   I+G +V   R+  N+ ++ I + YV + R  P LV +F +
Sbjct: 14  LARGAILTMKFAVASMVLGLIVGLVVAIVRIGNNRFLSAIAQGYVSLMRGTPLLVQMFVV 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +    D +    F + LN
Sbjct: 74  YYGLPDIGISLDPTSAGIFTLTLN 97


>gi|16264422|ref|NP_437214.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|15140559|emb|CAC49074.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 290

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 113/256 (44%), Gaps = 9/256 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V+  L+  ++    +                 L+    T+           VLG+V+++ 
Sbjct: 36  VVLLLFAGLVRAFSVGQIEWSYVRDFLFAPAILAGLYNTLLMTVAAMGLGIVLGVVIAIM 95

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV--LGQFNFIGGST 261
                R         + + YI  F   G P L+ + L + L    P   +          
Sbjct: 96  -----RISGNPVLSLIAIGYIWVF--RGAPALLQLMLWFNLALIFPTFGIPGLFEFRTVD 148

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           V   F++  + L     A+ +E+VRSGL++V  GQ EAA  +G+T  K  R ++LPQAMR
Sbjct: 149 VMTPFVAAVLGLGISQGAYTSEVVRSGLLSVDSGQYEAARTIGMTQMKMLRRIVLPQAMR 208

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++PP+ ++ + ++K +SLA  + +++++     I     + +E++L+  F YL +  ++
Sbjct: 209 VMVPPVGNEVIGMVKLTSLASVIQYSEILHNAQIIYFANTRVLELLLVASFWYLLVVSVL 268

Query: 382 ALFMNRLNAKIALKEK 397
           ++  + +        K
Sbjct: 269 SIGQHYIERYFGRGSK 284



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 40/84 (47%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q    Y  D  +A AIL G  NT  +  + M    ++G ++   R+S N +++ I 
Sbjct: 48  FSVGQIEWSYVRDFLFAPAILAGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSLIA 107

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVL 153
             Y+ VFR  P L+ +   +   L
Sbjct: 108 IGYIWVFRGAPALLQLMLWFNLAL 131


>gi|293607250|ref|ZP_06689591.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292814342|gb|EFF73482.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 249

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 14/236 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                 V  +   + +         +     + + SF LG+ L+ F   L R F      
Sbjct: 18  QIGSWTVPAWVQLMADSFWPLLHAGLVFTVPLTLMSFALGLALA-FVVALIRLFGPAPLV 76

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           AL   Y+  +LI G P LV + + +                   V     +  I  +   
Sbjct: 77  ALVRFYV--WLIRGTPLLVQLFVIFY-----------GLPSVGIVLDPLPAALIGFTLNV 123

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ +E++R  + ++ +GQ EAA +L +T  +A R  +LPQA R  +PPL++ ++ L+K+
Sbjct: 124 GAYNSEVIRGAIESITKGQWEAAYSLSMTRGQALRRTILPQAARVAVPPLSNSFIALVKD 183

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +SLA  +   ++      I   T + + +      IYL  S +++    RL  +  
Sbjct: 184 TSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLVFSSVLSAAQVRLERRFG 239



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 34/91 (37%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   +  G V T  L          +  +V   RL     +  + R YV + R  P 
Sbjct: 32  ADSFWPLLHAGLVFTVPLTLMSFALGLALAFVVALIRLFGPAPLVALVRFYVWLIRGTPL 91

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + SV  + D       G  LN
Sbjct: 92  LVQLFVIFYGLPSVGIVLDPLPAALIGFTLN 122


>gi|206968581|ref|ZP_03229537.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|228919495|ref|ZP_04082859.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228951132|ref|ZP_04113248.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229068326|ref|ZP_04201629.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus F65185]
 gi|229077954|ref|ZP_04210563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-2]
 gi|229108250|ref|ZP_04237872.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-15]
 gi|229143368|ref|ZP_04271799.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST24]
 gi|206737501|gb|EDZ54648.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|228640175|gb|EEK96574.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST24]
 gi|228675266|gb|EEL30488.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-15]
 gi|228705292|gb|EEL57669.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-2]
 gi|228714787|gb|EEL66659.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus F65185]
 gi|228808542|gb|EEM55045.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228840138|gb|EEM85415.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 218

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|42779547|ref|NP_976794.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42735463|gb|AAS39402.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 290

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 101 RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 146

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 147 GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLG 206

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 207 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 266

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 267 EKRLQRKE 274


>gi|290955800|ref|YP_003486982.1| ABC transporter transmembrane protein [Streptomyces scabiei 87.22]
 gi|260645326|emb|CBG68412.1| putative transport system transmembrane component [Streptomyces
           scabiei 87.22]
          Length = 328

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I   VV+    + V  ++  P +        FL    L    +T++  A   V   + 
Sbjct: 39  RWIATAVVLVLAAQFVHGLVSNPFYQWDRFAYWFLRPTILDGLLITLEVTAYSAVLGLIG 98

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LKYQLHFDKPVL 251
           GI+L+L     +R       +++  +YI       L  ++L       L   L    P  
Sbjct: 99  GILLAL-----ARLSDSPVLRSVSWVYIWALRSIPLIVVLLFLYNFSALYQTLSLGVPFG 153

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F     S ++ +     I LS   AA+ AE+VR G+++V +GQ EAA ALGL      
Sbjct: 154 PAFFTFDESRLATDMAVAVIGLSLNEAAYAAEVVRGGILSVDQGQHEAASALGLPKGYQF 213

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIW 370
           R ++ PQA+RSI P   +Q + L+K++SL   V   DL      + +   G  + ++L+ 
Sbjct: 214 RRIVFPQALRSITPNYVNQLIGLIKSTSLVFYVSLLDLFGTAQAMGSTYPGDIVPLLLVS 273

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL L+ ++++    +    A    +
Sbjct: 274 TVWYLILTSVVSVIQFYVERYYARGATR 301



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 55/172 (31%), Gaps = 5/172 (2%)

Query: 68  AGFEIDQGIVPYTSDSSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           A F       P+     +A   L      G + T  +     +   I G L+   RLS +
Sbjct: 51  AQFVHGLVSNPFYQWDRFAYWFLRPTILDGLLITLEVTAYSAVLGLIGGILLALARLSDS 110

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            ++  +  VY+   R+IP +VV+ FLY        +       P     +   L+     
Sbjct: 111 PVLRSVSWVYIWALRSIPLIVVLLFLYNFSALYQTLSLGVPFGPAFFTFDESRLATDMAV 170

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                 +   ++   +V     +         +   LP  Y    ++F    
Sbjct: 171 AVIGLSLNEAAYAAEVVRGGILSVDQGQHEAASALGLPKGYQFRRIVFPQAL 222


>gi|239627706|ref|ZP_04670737.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239517852|gb|EEQ57718.1| amino acid ABC transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 267

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 94/244 (38%), Gaps = 19/244 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
           +P      V+          L    ++M       +   ++G  + +  T  S       
Sbjct: 1   MPTDFFGRVMVVFNKYGMSMLQGAGVSMRIALVGTLVGCIIGFAVGIVQTIPSAKGDNPV 60

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIG------GSTVSPEFMS 268
            + L            L  + LI   Y   F   P++ Q  FI              + +
Sbjct: 61  KRVL------------LWIIKLILNAYVEFFRGTPMMAQAMFIYFGLLPLLGIDMSMWGA 108

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
               LS  T A++AE VR G++++  GQ E A ++G+TH +    V+LPQA+R+I+P + 
Sbjct: 109 ANFILSINTGAYMAETVRGGILSIDPGQTEGAKSIGMTHVQTMIYVILPQALRNIMPQIG 168

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  +  +K+S +   +G  +L+              E   I M +Y  ++   +  +   
Sbjct: 169 NNLIINIKDSCVLSVIGVTELLYKTKAAAGALYMNFETYTITMIMYFIMTFTCSRILRWW 228

Query: 389 NAKI 392
             ++
Sbjct: 229 ENRM 232



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 12/81 (14%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICRVY 132
           Y  ++L G   +  +A  G +   IIG  VG  +   +             ++  I   Y
Sbjct: 16  YGMSMLQGAGVSMRIALVGTLVGCIIGFAVGIVQTIPSAKGDNPVKRVLLWIIKLILNAY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVL 153
           VE FR  P +    F+Y  +L
Sbjct: 76  VEFFRGTPMMAQAMFIYFGLL 96


>gi|86144264|ref|ZP_01062596.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85837163|gb|EAQ55275.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 265

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 19/276 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
              ++ + ++ V V   +  L               +PD+      G +     +    +
Sbjct: 7   KPALSALVQIVVLVAAVVWILDSGAQTMGYSWQWERVPDYIAFYEDGEWWPAELVEGLLV 66

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T++ +    V + ++G+  +L      R+ +   G+ L   Y+   LI   P LV I L 
Sbjct: 67  TINISLISLVATLIIGLTTALL-----RNSNSVVGRTLATSYVE--LIRNTPLLVQIYLL 119

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +AL+ +  A+ AEI R+GL  + RGQ EAA 
Sbjct: 120 YFVF------------GPVLGLDRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQ 167

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+       V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T 
Sbjct: 168 SLGLSKTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETA 227

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              EI      IYL+L++ ++     L  K+    +
Sbjct: 228 MPFEIWFSVAIIYLALTLSLSAVAAWLEHKLGANWR 263



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 13/123 (10%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           ++  ++L    +W +++    M       G  +  ER         + +  D  +  A L
Sbjct: 13  LVQIVVLVAAVVWILDSGAQTM-------GYSWQWER-----VPDYIAFYEDGEWWPAEL 60

Query: 91  V-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           V G + T  ++   ++   IIG      R S + +   +   YVE+ RN P LV I+ LY
Sbjct: 61  VEGLLVTINISLISLVATLIIGLTTALLRNSNSVVGRTLATSYVELIRNTPLLVQIYLLY 120

Query: 150 KSV 152
              
Sbjct: 121 FVF 123


>gi|322392259|ref|ZP_08065720.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus peroris ATCC 700780]
 gi|321144794|gb|EFX40194.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus peroris ATCC 700780]
          Length = 227

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +   +LG +L +     ++    K       LYI  F   G 
Sbjct: 7   PKYLPYFNYGAIVTIIISILVVLLGTILGVLL-AFAQRSKIKPLVWFSNLYIWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + Y L      + Q   +         +   I +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAYALMHISAPIIQIGILD--VDLTRLIPGIIIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +     ++   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFENRMGQGDKK 227



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++   ++  TI+G L+   + S  K + W   +Y+ +FR  P +V 
Sbjct: 9   YLPYFNYGAIVTIIISILVVLLGTILGVLLAFAQRSKIKPLVWFSNLYIWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   Y  +    PI  
Sbjct: 69  IMIAYALMHISAPIIQ 84


>gi|27468910|ref|NP_765547.1| ABC transporter (permease protein) [Staphylococcus epidermidis ATCC
           12228]
 gi|27316458|gb|AAO05633.1|AE016750_238 ABC transporter (permease protein) [Staphylococcus epidermidis ATCC
           12228]
          Length = 164

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 89/164 (54%), Gaps = 1/164 (0%)

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V + + +    +   L   N     T++P  ++  I LS    A+ +EI+R G++++P
Sbjct: 1   MIVQLFIIFYGIPELGRLVTNNADNQWTLAP-VIAAVIGLSLNVGAYASEIIRGGILSIP 59

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA ++G+ +R+  + ++LPQA+R  IP L + +L+L+K++SL   +  A++    
Sbjct: 60  KGQTEAAYSIGMNYRQTVQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKA 119

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             + + T + + I L+   +Y  +  +I++      ++I    +
Sbjct: 120 QEVASTTYEYLTIYLLVALMYWVVCFVISIIQGWYESRIERGYR 163


>gi|28870188|ref|NP_792807.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853434|gb|AAO56502.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 324

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    +     L   V S+   P     +    F +   L   + T+       VFS VL
Sbjct: 42  RWAGSIFAALVLVAIVHSLATNPRWEWDVFGQWFFSPSVLRGLSQTLLLTLLSTVFSIVL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G  L+L     +R        AL   YI  F       +++I   +   +D  VL     
Sbjct: 102 GTALAL-----ARLSRSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLAVPFT 156

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 DLVFAQWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 VFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTVLTSAQYYVERHFARGTAR 304



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + ++GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLSQTLLLTLLSTVFSIVLGTALALARLSRSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|302868837|ref|YP_003837474.1| polar amino acid ABC transporter inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315504694|ref|YP_004083581.1| polar amino acid abc transporter, inner membrane subunit
           [Micromonospora sp. L5]
 gi|302571696|gb|ADL47898.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315411313|gb|ADU09430.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora sp. L5]
          Length = 325

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 24/271 (8%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ +       L V     +   +   MF           T+       +    LG+V++
Sbjct: 32  VLSVLAAMFVHLLVTNEAFNWSFMVDKMFRPPIIEGLLRGTVLMTVSAMLIGVTLGVVIA 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LKYQLHFDKPVLGQFNF 256
           +      R       + +  LY   F       L+ +      L  ++ F  P   Q   
Sbjct: 92  VM-----RLSDNPILRGVAWLYTWFFRAVPRLVLLAVFGNIGILWSRVEFGVPFDTQIGQ 146

Query: 257 IGGST-------------VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + G               +   FM+  + L+   AA++AEIVR+G+ +V  GQ EAA AL
Sbjct: 147 LFGIDNLQLRLFGFSSRDILTGFMAGLLGLALSEAAYMAEIVRAGIQSVDPGQTEAAQAL 206

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQ 362
           GL+  +  R V+LPQAMR IIPP  ++ + +LK++SL + V    +L      +  +T Q
Sbjct: 207 GLSRAQLLRRVVLPQAMRVIIPPTGNETIAMLKDTSLLLYVPVSVELFFQLDAVGKRTFQ 266

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + +     YL L+ ++ +    L     
Sbjct: 267 IFPMYVAACLWYLFLTSILLVGQYYLERHFG 297



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 2/111 (1%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP--PLVVIFFLYK 150
              T  +  S M+    +G ++   RLS N ++  +  +Y   FR +P   L+ +F    
Sbjct: 69  LRGTVLMTVSAMLIGVTLGVVIAVMRLSDNPILRGVAWLYTWFFRAVPRLVLLAVFGNIG 128

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            + S +            +F  +            +      + +LG+ LS
Sbjct: 129 ILWSRVEFGVPFDTQIGQLFGIDNLQLRLFGFSSRDILTGFMAGLLGLALS 179


>gi|190574065|ref|YP_001971910.1| putative transmembrane ABC transporter [Stenotrophomonas
           maltophilia K279a]
 gi|190011987|emb|CAQ45609.1| putative transmembrane ABC transport protein [Stenotrophomonas
           maltophilia K279a]
          Length = 581

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 11/249 (4%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SVL  P          F     L     T+   A      F LG +L+L     +R    
Sbjct: 48  SVLGNPRWGWGTFAEWFFARPVLEGLGRTLLLTALGTGLGFALGTLLAL-----ARVSGS 102

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGST-VSPEFM 267
               A+   Y+  F    L  L+L+          +    P  G   F   +T +   F 
Sbjct: 103 PLLSAVSWGYVWLFRSIPLLVLLLLLNNLGYLYSTIELGVPFTGISLFSYPTTQLIGVFT 162

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+   AAF AE++R G+++V  GQ EAA ALGL   +  R ++LPQAMRSI+P  
Sbjct: 163 AAVLGLTLNQAAFSAEVIRGGILSVDNGQYEAAAALGLPRARQVRRIILPQAMRSILPAA 222

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  + L K++S+   +   +L      I  +  + + ++++    YL +  +++L   R
Sbjct: 223 FNDVIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVVPLLMVATVWYLVILTVLSLMQRR 282

Query: 388 LNAKIALKE 396
           +  + A  +
Sbjct: 283 VEQRFARGQ 291



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++  +A  +L G   T  L   G      +GTL+   R+S + L++ +   YV +FR+IP
Sbjct: 61  AEWFFARPVLEGLGRTLLLTALGTGLGFALGTLLALARVSGSPLLSAVSWGYVWLFRSIP 120


>gi|120603262|ref|YP_967662.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120563491|gb|ABM29235.1| amino acid ABC transporter membrane protein 1, PAAT family / amino
           acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 596

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 18/248 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F +  +   L                  GL     ++         SF +G+V+ +    
Sbjct: 358 FNWGVIADNLRTLLIWHFPNGQSDELFMGLGGLAYSLLMAVIAISVSFFIGLVVGI---- 413

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    +  +   LLYI            LI + + ++F  PVL    F         F
Sbjct: 414 -GRTSDNRICRIPCLLYIELIRGNP-----LIIVIFWIYFFIPVLFNTFF-------NVF 460

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S  IAL+ +T A++AEIVR+G+  +P GQ+EAA + GLT  +  R ++LPQA++ +IP 
Sbjct: 461 WSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTMRRIILPQALKQMIPA 520

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFM 385
           +  Q++ + K++SLA  +G  +L  V   I N+     +EI     F+Y      ++++ 
Sbjct: 521 IVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTVAFLYFICCWSMSVYA 580

Query: 386 NRLNAKIA 393
            RL  +++
Sbjct: 581 ARLERRLS 588



 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 13/272 (4%)

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP----FGMFLNNRGLSFPTLT 182
           W+ + +V+        ++  + +  V          I+      +G  L    L    +T
Sbjct: 5   WLDKTWVQYLVLCSITLLAVYYWGWVFDFGYQFQWDILFTRNTTYGTHLGLEILKGLGVT 64

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +  +      +  LG VL +     +R       +      +  F     P LV +   Y
Sbjct: 65  VRISLISSALALGLGTVLGI-----ARLSLFAPLRLTATAVVEFF--RNTPLLVQLFFWY 117

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                  +L +       T + EF    I LS YT+AF+AE++R+GL ++P+G +EAA +
Sbjct: 118 FAF--PAILPENIRELLFTGNFEFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYS 175

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            GL + +  R ++LP A R+IIPPL S++LN +KNSSLA+ VG A+L      + + T +
Sbjct: 176 SGLNYVQVLRTIILPMAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELTWQSQQVESLTFK 235

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             E       +YLSLS++I+  +N +N K+ L
Sbjct: 236 GFEATSAATVLYLSLSLLISFILNGVNGKMRL 267



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 4/125 (3%)

Query: 74  QGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           Q  + +T +++Y T +    L G   T  ++      A  +GT++G  RLS    +    
Sbjct: 38  QWDILFTRNTTYGTHLGLEILKGLGVTVRISLISSALALGLGTVLGIARLSLFAPLRLTA 97

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
              VE FRN P LV +FF Y +  ++LP     ++           +     T    A++
Sbjct: 98  TAVVEFFRNTPLLVQLFFWYFAFPAILPENIRELLFTGNFEFWCATIGLSVYTSAFMAEV 157

Query: 190 FVFSF 194
                
Sbjct: 158 IRAGL 162



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 2/199 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  +A   +  +  IG +VG GR S N++    C +Y+E+ R  P ++VIF++Y
Sbjct: 387 LGGLAYSLLMAVIAISVSFFIGLVVGIGRTSDNRICRIPCLLYIELIRGNPLIIVIFWIY 446

Query: 150 KSV--LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
             +  L                      L+        N             L+   T  
Sbjct: 447 FFIPVLFNTFFNVFWSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTMR 506

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                +   + +P +      IF   +L  +    +L F    +     +    +     
Sbjct: 507 RIILPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTVA 566

Query: 268 SLYIALSCYTAAFIAEIVR 286
            LY       + + A + R
Sbjct: 567 FLYFICCWSMSVYAARLER 585


>gi|326560584|gb|EGE10965.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 103P14B1]
 gi|326565590|gb|EGE15753.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 12P80B1]
 gi|326568464|gb|EGE18544.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis BC7]
 gi|326573965|gb|EGE23915.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis O35E]
          Length = 241

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 4/233 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +                 T  ++ V S  LG+V  +      R       +A+P  YI
Sbjct: 1   MNWNWQAIINYFPDLLAASVTTIELVVLSCALGLVFGVILGLW-RLSPVLWLRAIPATYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV I L Y        L + +F+     S  +    IA +  T+A+I EI
Sbjct: 60  FFF--RGTPLLVQIFLIYYGLGQFTALKE-SFLWDPIFSQAYWCAIIAFTLNTSAYIGEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  ++AVP G++EAA A+G++ ++    V+LP+A   +IP  +++ + +LK S+LA ++
Sbjct: 117 VRGAVMAVPTGELEAADAIGMSKQQKLHRVILPRAFGIMIPAYSNEVIFMLKGSALAASI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L      II+ T   +E+      IYL +S +      +   ++   ++
Sbjct: 177 TVVELTHKARDIISITYLHLEMFFAAGVIYLVISWVFLFIFRQFEHRVNRHKR 229



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L   V T  L         + G ++G  RLS    +  I   Y+  FR  P LV
Sbjct: 10  NYFPDLLAASVTTIELVVLSCALGLVFGVILGLWRLSPVLWLRAIPATYIFFFRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            IF +Y  +     + +  +  P         +   TL         V   V+ +
Sbjct: 70  QIFLIYYGLGQFTALKESFLWDPIFSQAYWCAIIAFTLNTSAYIGEIVRGAVMAV 124


>gi|295400876|ref|ZP_06810852.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312111274|ref|YP_003989590.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|294977139|gb|EFG52741.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311216375|gb|ADP74979.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 217

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 99/178 (55%), Gaps = 8/178 (4%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            PL ++    +  +  + L+ + +      P +              F +  + L+ YTA
Sbjct: 48  RPLNWLGAAYVEFIRNIPLVLIVFVFFVGLPAI--------GIRFDPFTAGTLGLTVYTA 99

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAE++RSG++AVP+GQ EAA + GLT+ +  R ++LPQA++ +IPPL +Q++NL+KNS
Sbjct: 100 AFIAEVIRSGILAVPKGQTEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQFINLVKNS 159

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           S+   +   DL+  G  I ++T    ++ +     YL L+I ++L +  L  ++A   
Sbjct: 160 SVLGVIAGLDLMYFGDLISSETFVTFDVYIFVALFYLVLTIPLSLGVGYLERRLAKSR 217



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y+    +    + GF NT   +   +I + IIG ++   R++  + + W+   YVE  RN
Sbjct: 4   YSILFEHWDMYMQGFANTLKASVLALIGSLIIGIIIAIFRIAPIRPLNWLGAAYVEFIRN 63

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           IP ++++F  +  + ++    D       G+ +         +     A
Sbjct: 64  IPLVLIVFVFFVGLPAIGIRFDPFTAGTLGLTVYTAAFIAEVIRSGILA 112


>gi|229028440|ref|ZP_04184562.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
 gi|228732889|gb|EEL83749.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
          Length = 218

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 118/220 (53%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LGI+L++      R           L ++ T  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGIILAVMRIAPIRI----------LNWLGTAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++    L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTATLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGIILAVMRIAPIRILNWLGTAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|227505029|ref|ZP_03935078.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           striatum ATCC 6940]
 gi|227198393|gb|EEI78441.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           striatum ATCC 6940]
          Length = 326

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 4/258 (1%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            +F     +L V  +   +    FG     + L    + +       I   + ++G+V  
Sbjct: 41  WVFATILVLLGVWFVISSARNEAFGWDTYFQYLFDSRIAIASLHTLAITALAMIIGVVGG 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                + R       + +  L++  F    +   ++        +    LG       S 
Sbjct: 101 AIL-AVMRMSPNPVLQGVAWLFLWIFRGTPVYVQLVFWGLLSALYQSINLGFTEISLASV 159

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++  F+   + L    AA++AEIVRSG+ AVP GQ EA+ ALG+      R  +LPQAMR
Sbjct: 160 LTNAFLLSVLGLGLNEAAYMAEIVRSGISAVPEGQKEASKALGMGWWMTMRRTVLPQAMR 219

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            IIPP  +++++LLK SSL VAV +  ++      I     + I ++L+    YL ++ +
Sbjct: 220 IIIPPTGNEFISLLKTSSLVVAVPYTYEIFGRATDISAALFEPIPLLLVAATWYLVITSL 279

Query: 381 IALFMNRLNAKIALKEKK 398
           + +    L  +      +
Sbjct: 280 LMIAQYFLERRFDRGATR 297



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 43/119 (36%), Gaps = 22/119 (18%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           +   +L+ +   + ++         N + G                  Y  DS  A A L
Sbjct: 42  VFATILVLLGVWFVIS------SARNEAFGWD------------TYFQYLFDSRIAIASL 83

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
               +T  +    MI   + G ++   R+S N ++  +  +++ +FR  P  V + F  
Sbjct: 84  ----HTLAITALAMIIGVVGGAILAVMRMSPNPVLQGVAWLFLWIFRGTPVYVQLVFWG 138


>gi|78358782|ref|YP_390231.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78221187|gb|ABB40536.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 217

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      + L +         ++     +LG VL L  + L R   +K        YI
Sbjct: 1   MYFEFSAIPKYLPYFLPAAWMTLQVTTLGILLGFVLGLGTSFL-RISDKKILNLPARAYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +LI G P L+ +   Y        L                S  +AL  +  A+IAEI
Sbjct: 60  --YLIRGTPLLLQLLFIYFGLRSLAGLE------------AITSAVLALGIHNGAYIAEI 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  + ++  GQMEAA +LG+++ +A   ++LPQA++  IPPL +Q++  LK+SSLA  +
Sbjct: 106 FRGAISSISTGQMEAARSLGMSYPRAMVRIILPQALKRAIPPLGNQFIIALKDSSLASTI 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +L+     + +     +E++ I    YL  + + +   +RL AK+
Sbjct: 166 TINELLLKSQQLASSNFMMMEMLAIAALFYLLYTAVFSWLFHRLEAKL 213



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   Y    L     T  +   G++   ++G      R+S  K++    R Y+ + R
Sbjct: 4   EFSAIPKYLPYFLPAAWMTLQVTTLGILLGFVLGLGTSFLRISDKKILNLPARAYIYLIR 63

Query: 138 NIPPLVVIFFLYKSV 152
             P L+ + F+Y  +
Sbjct: 64  GTPLLLQLLFIYFGL 78


>gi|148975203|ref|ZP_01812127.1| putative amino acid ABC transporter, permease protein [Vibrionales
           bacterium SWAT-3]
 gi|145965127|gb|EDK30377.1| putative amino acid ABC transporter, permease protein [Vibrionales
           bacterium SWAT-3]
          Length = 253

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 17/253 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV + FL                   G       ++  + T+  +     F+  LG++++
Sbjct: 15  LVSLLFLTGCSDYQWGWYVLDPSTEQGRTNIQFLMAGFSETIQVSLLSMFFAMALGLLVA 74

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
             A   S        + +  LY+       +  L+L      +++  P L   +      
Sbjct: 75  FPALSSS-----PILRGINRLYVEVMRSIPVLVLLL-----WVYYGMPTLLDVSL----- 119

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGLT+ +  RLV+LP A R
Sbjct: 120 --NHFWAGVIALTIAESAFMAEVFRGGIQAINRGQHEAAESLGLTYWQKMRLVILPLAFR 177

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PPL +Q++ +LK SSL   +G +DL      ++      +EI    +  YL L +++
Sbjct: 178 QILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLVLILVV 237

Query: 382 ALFMNRLNAKIAL 394
           +  +  L  +IA+
Sbjct: 238 SQAVRWLEKRIAI 250



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 63  FLSERAGFEIDQGIVPYT--SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
           FL+  + ++    ++  +     +    ++ GF  T  ++   M  A  +G LV    LS
Sbjct: 20  FLTGCSDYQWGWYVLDPSTEQGRTNIQFLMAGFSETIQVSLLSMFFAMALGLLVAFPALS 79

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           ++ ++  I R+YVEV R+IP LV++ ++Y  + 
Sbjct: 80  SSPILRGINRLYVEVMRSIPVLVLLLWVYYGMP 112


>gi|125624393|ref|YP_001032876.1| putative amino-acid ABC transporter permease protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124493201|emb|CAL98166.1| putative amino-acid ABC transporter permease protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300071180|gb|ADJ60580.1| putative amino-acid ABC transporter permease protein [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 295

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 6/249 (2%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             ++    +        F      S          K+   S  + I+  +F   L     
Sbjct: 25  FLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFVPIIKMIPSSLEMTIIAMIFGLLLGLILA 84

Query: 213 EKTGKALPLLYISTFL----IFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266
                 +P+L     L    I G P LV + L Y       K +   +         P  
Sbjct: 85  LVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNYNVNTIPAM 144

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           + + +A +    A+ +E +R+ + +V +GQ+EAA +LG+T+ +    V LP+A      P
Sbjct: 145 LFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAP 204

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + LLK++SLA   G  ++ +    I   T +  E  L    +Y  + I+  + + 
Sbjct: 205 LGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVYWPICIIFEILIR 264

Query: 387 RLNAKIALK 395
            L  K+ ++
Sbjct: 265 ALERKLDVR 273


>gi|227509838|ref|ZP_03939887.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227512775|ref|ZP_03942824.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227522899|ref|ZP_03952948.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227083975|gb|EEI19287.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227089928|gb|EEI25240.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227190762|gb|EEI70829.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 212

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 13/190 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A  +      K  + +  +YI  F    +P LV+    Y +                   
Sbjct: 36  AFAIMETMPNKFARVVARVYIEVF--RNIPLLVITMFFYVV-----------IPMYIVKI 82

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F S  + L+ Y++AFIAE VRSG+ +V  GQME A + GL++ ++ R ++LPQA R +
Sbjct: 83  SGFASGTVGLTLYSSAFIAETVRSGIQSVDPGQMEGARSTGLSYWQSMRYIILPQAFRYV 142

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           IPPL +Q++NL+KNSS+   V   DL+     I + + Q++   +    +YL L++ ++ 
Sbjct: 143 IPPLGNQFINLVKNSSVLAFVAGFDLMYQANVIASDSLQSMSTYMCVGVLYLILTLPLSY 202

Query: 384 FMNRLNAKIA 393
           +M  L  K+A
Sbjct: 203 YMRHLEKKLA 212


>gi|242278994|ref|YP_002991123.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242121888|gb|ACS79584.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 231

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 18/240 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            ++          +  +     ++         +F +G+   L   RLSR+   KT    
Sbjct: 7   WNNFDYFLWGAFPDGPIGGLAASIILALLGIFGAFWIGLAAGLM--RLSRNRAVKT---- 60

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
               +S   I  +  + L+ L +  +F  PV+            PEF    IA   +T A
Sbjct: 61  ----VSVIYIEVIRGVPLLMLIFWFYFLAPVVLG-------RSLPEFHCALIAFIVFTGA 109

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EIV++G+IA+PRGQMEAA   GL+H +A R V+LPQA+R++IP   +Q+++L K++S
Sbjct: 110 YIGEIVKAGVIALPRGQMEAARGTGLSHVQAMRYVILPQALRNMIPSFVNQFVSLTKDTS 169

Query: 340 LAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA  +G  +L      + N+T     EI +    +Y  +  ++     R+ A +A  + +
Sbjct: 170 LAYIIGVNELTRTATQVNNRTLSAPTEIFITIAILYFIVCYVLTWASRRMEAHMAKYQAR 229



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 32/59 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           G   +  LA  G+  A  IG   G  RLS N+ V  +  +Y+EV R +P L++IF+ Y 
Sbjct: 25  GLAASIILALLGIFGAFWIGLAAGLMRLSRNRAVKTVSVIYIEVIRGVPLLMLIFWFYF 83


>gi|167903853|ref|ZP_02491058.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei NCTC 13177]
          Length = 219

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAALTMKFAVASMVLGLIVGLLV-ALVRIGSNRLLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G ++ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDI----------GISLDPT-AAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+   +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVICPQALCLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++A    R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGRIETRCAL 215



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F 
Sbjct: 13  VLAKGAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDIGISLDPTAAGIFTLTLN 97


>gi|156977167|ref|YP_001448073.1| ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116]
 gi|156528761|gb|ABU73846.1| hypothetical protein VIBHAR_05953 [Vibrio harveyi ATCC BAA-1116]
          Length = 306

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYIS 225
                    T+  +    VF+ VLG  L L     S          +       PL+++ 
Sbjct: 72  PYFFQGLASTLRLSIWGIVFALVLGTFLGLARFSDSVWLRTPANAFIQLVRNIPPLVFVF 131

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +     +   +  +P   Q  F G + +     S  + +   ++A+IA
Sbjct: 132 IFYFFISNQLIPLLGLEDILRNYRGEPNAVQSFFFGPANLWENLASGVLCVGLLSSAYIA 191

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VR+GL +V +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+  
Sbjct: 192 EVVRAGLQSVDKGQWEAADSLGLSSWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVS 251

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   ++  VG  + N +G   EI LI  F+Y  +   +++F   +  K
Sbjct: 252 LISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMFFRYIEKK 300



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G  +T  L+  G++ A ++GT +G  R S +  +      ++++ RNIPPL
Sbjct: 73  YFFQGLASTLRLSIWGIVFALVLGTFLGLARFSDSVWLRTPANAFIQLVRNIPPL 127


>gi|34762442|ref|ZP_00143442.1| Amino acid transport system permease protein [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27887910|gb|EAA24978.1| Amino acid transport system permease protein [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 236

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 97/176 (55%), Gaps = 10/176 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI   +I G P +V + +   L F          +G    +P  +   IA    + A+
Sbjct: 71  IAYIYIDVIRGTPVVVQLMILANLIF----------VGALRETPILVIGGIAFGLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+  + +GQMEA  ALGL++ +  R +++PQA+++I+P L S+++ LLK +S+
Sbjct: 121 VAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAVKNILPALVSEFITLLKETSI 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G  DL+     I +QT + +E +L    IYL L+ +   FM ++   + + +
Sbjct: 181 IGFIGGIDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|212709680|ref|ZP_03317808.1| hypothetical protein PROVALCAL_00728 [Providencia alcalifaciens DSM
           30120]
 gi|212687491|gb|EEB47019.1| hypothetical protein PROVALCAL_00728 [Providencia alcalifaciens DSM
           30120]
          Length = 246

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 17/228 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHF----------HEKTGKALPLLYISTFLIFGLPTLV 236
             + V + +LG+VL++  T                     + LP L +  F+ FG   L+
Sbjct: 15  VGLAVSALILGLVLAMLFTAWESVRFKPLAFLGTCWVTLIRGLPELLVVLFVYFGTLQLI 74

Query: 237 LIA-------LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            +        L +     +     F    G      F    IAL+   A++ ++ +R  L
Sbjct: 75  NLLGDGIAINLGFWQGTFQIDPSIFFADSGEFDYTPFFCGVIALALLYASYASQTLRGAL 134

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP GQ EA +ALGL+ R      ++PQ  R  +P L +Q+L LLK+++L   +   DL
Sbjct: 135 KAVPYGQWEAGLALGLSKRTIFFRYIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDL 194

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    TI+N+T +      I   IYL+++++  L + R+  +    E+
Sbjct: 195 MLQTKTIVNRTHEPFTWYAIVGLIYLAITLLSQLVLKRIELRTTRFER 242


>gi|229101401|ref|ZP_04232145.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-28]
 gi|228682106|gb|EEL36239.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-28]
          Length = 218

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++ +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMCIAPIRI----------LNWVGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTLTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++    ++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMCIAPIRILNWVGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|149004460|ref|ZP_01829185.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|225861279|ref|YP_002742788.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|147757608|gb|EDK64628.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|225727024|gb|ACO22875.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|332076102|gb|EGI86568.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 209

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 9/212 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +     +LG+VL+       +    K    L  LY+  F   G P +V I + + L  
Sbjct: 7   ICVIFLGTILGVVLAF-----GQRSKFKPLVWLANLYVWIF--RGTPMMVQIMIAFALMH 59

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                 Q   +G        +   + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+ 
Sbjct: 60  INAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIR 117

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  
Sbjct: 118 PKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTP 177

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L   F YL ++ ++ + +      +   +KK
Sbjct: 178 LLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 209



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V I   +  +   
Sbjct: 2   TILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHIN 61

Query: 156 LPIPD 160
            P   
Sbjct: 62  APTIQ 66


>gi|42518677|ref|NP_964607.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii NCC 533]
 gi|41582963|gb|AAS08573.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii NCC 533]
 gi|329666942|gb|AEB92890.1| Glutamine transport system permease protein [Lactobacillus
           johnsonii DPC 6026]
          Length = 212

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  LS    T+  +     FS +LG+  +L           K G+A+  +YI  F   
Sbjct: 8   HWSEFLSGFWNTILCSVIALFFSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  + +I      +   P +              F +  I L+ YT+AFIAE VR+G+ 
Sbjct: 63  PLLVITMIF-----YLVVPQIW--------FKVSGFAAGTIGLTLYTSAFIAETVRAGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQME A + G+T+ +A R V+LPQA++ +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 SVGDGQMEGARSNGMTYTQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   + + I   ++    YL L++ ++ +M  L  K+A
Sbjct: 170 YQADVIAFSSFETINTYVVVGLFYLVLTLPLSYYMRHLEKKLA 212



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++ +  L GF NT   +   +  + I+G       ++ NK    +  VY+E+FRNIP LV
Sbjct: 7   NHWSEFLSGFWNTILCSVIALFFSLILGVGFALLEVAPNKFGRAVAHVYIEIFRNIPLLV 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +    Y  V  +            G+ L     
Sbjct: 67  ITMIFYLVVPQIWFKVSGFAAGTIGLTLYTSAF 99


>gi|295103474|emb|CBL01018.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 254

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 17/230 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA----TRLSRHFHEKTGKALPLLYISTF 227
             + +S    T+   A       VLG V++L       +   H +   G    +  + T 
Sbjct: 38  WMQYISGVGTTLLVTALALALGVVLGSVVALVRVTHDQQRPGHKNAVLGFFNAVCQVYTT 97

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P +V + +   + F                    M   + L   + A+++EI+R 
Sbjct: 98  IIRGTPMMVQLLIMSMVIFANSRNFT-------------MVGALTLGINSGAYVSEIIRG 144

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL+AV  GQMEA  +LGL +     ++++PQA+R+++P L ++++ LLK++SL   +G  
Sbjct: 145 GLMAVDPGQMEAGRSLGLNYMTTMVVIIIPQAIRAVLPALGNEFIILLKDTSLITTIGGK 204

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L+     I+N+T  A+  +L    IYL L ++    +++   ++A  ++
Sbjct: 205 ELLYAAQGIMNRTYDAMFPLLGVALIYLILVMLFTWLLSKFERRLAQSDR 254


>gi|255324615|ref|ZP_05365732.1| ABC-type amino acid transport system, permease component
           [Corynebacterium tuberculostearicum SK141]
 gi|311740518|ref|ZP_07714345.1| amino acid ABC superfamily ATP binding cassette transporter
           [Corynebacterium pseudogenitalium ATCC 33035]
 gi|255298521|gb|EET77821.1| ABC-type amino acid transport system, permease component
           [Corynebacterium tuberculostearicum SK141]
 gi|311304038|gb|EFQ80114.1| amino acid ABC superfamily ATP binding cassette transporter
           [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 317

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT--MDTNAKIFVFSFVLGIVLS 201
            +F     VL+V  I   +    FG     + L    +         I + S ++G+V  
Sbjct: 32  WVFAGLLIVLAVWFIIASARNEAFGWDTYFQYLFDKRIALASLHTIAITILSMIIGVVGG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
                + R       +++   +I  ++  G P  V +     L   +    LG       
Sbjct: 92  AIL-AVMRMSPNPVLRSVS--WIFLWVFRGTPIYVQLVFWGLLSAIYQSINLGFTEVSLQ 148

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           + ++  F    + L    AA++AEIVRSG+ +VP GQ EA+ ALG++     R  +LPQA
Sbjct: 149 TILTNAFFLAVMGLGLNEAAYMAEIVRSGITSVPEGQKEASKALGMSWWMTMRRTVLPQA 208

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  +++++LLK SSL VA+ +  ++      I     Q I ++L+    YL ++
Sbjct: 209 MRIIIPPTGNEFISLLKTSSLVVAIPYTEEIFGRSTDISAALFQPIPLLLVAASWYLVVT 268

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +    L  +      +
Sbjct: 269 SLLMVGQYFLERRFERGATR 288



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 22/119 (18%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           +   LL+ +   + +          N + G                  Y  D   A A L
Sbjct: 33  VFAGLLIVLAVWFIIA------SARNEAFGWD------------TYFQYLFDKRIALASL 74

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
               +T  +    MI   + G ++   R+S N ++  +  +++ VFR  P  V + F  
Sbjct: 75  ----HTIAITILSMIIGVVGGAILAVMRMSPNPVLRSVSWIFLWVFRGTPIYVQLVFWG 129


>gi|320546339|ref|ZP_08040656.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Streptococcus equinus ATCC 9812]
 gi|320448993|gb|EFW89719.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Streptococcus equinus ATCC 9812]
          Length = 228

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 118/232 (50%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +T+  +A +  F  ++GI+++L      +  + K    +   
Sbjct: 1   MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALV-----KRTNIKILNWITSF 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF    +  F  +         +   I +S  + A+I
Sbjct: 56  YVWVF--RGTPMVVQIMIAFAWMHFSNAPIVGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+    A R V+LPQA+++I+P L ++++ ++K+SSL 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPVNAMRYVILPQALKNILPALGNEFITIIKDSSLL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   +++  T   I  +L   F YL ++ +++  + +L  ++ 
Sbjct: 172 QTIGVMELWNGAQSVVTATYLPITPLLFAAFYYLMVTTVLSFLLKKLETRMG 223



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y      G + T  ++   +   TIIG LV   + +  K++ WI   YV VF
Sbjct: 1   MDFSFLPKYWAYFNYGVLVTIMISACVVFFGTIIGILVALVKRTNIKILNWITSFYVWVF 60

Query: 137 RNIPPLVVIFFLYKSV 152
           R  P +V I   +  +
Sbjct: 61  RGTPMVVQIMIAFAWM 76


>gi|319945076|ref|ZP_08019338.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
 gi|319741646|gb|EFV94071.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lautropia mirabilis ATCC 51599]
          Length = 224

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 13/186 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +  +  + L   Y+S F   G P LV + + Y                         +  
Sbjct: 46  YARRPIQWLVRFYVSFF--RGTPLLVQLFIIYY-----------GLPEIGLQLDPLPAAI 92

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  S  TAA+  E +R+ +  +  GQ EAA +LG+  R   R +++PQA R+ +PPL + 
Sbjct: 93  IGFSLNTAAYTCETLRAAIAQIDAGQWEAAASLGMNRRHTLRRIIVPQAARTALPPLGNS 152

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K++SLA  +   +L+     I  +T +   + +    IY +++ +++    RL  
Sbjct: 153 FIALVKDTSLAATIQVPELLRQSQLITARTFEVFAMYISAALIYWAIASILSALQARLER 212

Query: 391 KIALKE 396
                E
Sbjct: 213 HTNRSE 218


>gi|239909115|ref|YP_002955857.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239798982|dbj|BAH77971.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 231

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 18/229 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+         +F LG+ + L      R   + + +   + +I   +I 
Sbjct: 18  YPKGPLGGLAMTVILAVGGIFGAFWLGLGVGLM-----RISKKPSLRWPAMGFIE--IIR 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L    + +  +F  PV+            PE  S  IAL  +T+A+IAEIVR+G+ 
Sbjct: 71  GTPLL---MVVFWFYFLAPVVFGHTL-------PEAESALIALIVFTSAYIAEIVRAGVE 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQMEAA   GL+H +A   ++LPQA+ ++IP   +Q+++L K++SLA  +G  +L 
Sbjct: 121 ALPKGQMEAARGTGLSHFQAMTHIILPQALFNMIPSFVNQFVSLTKDTSLAFIIGVNELT 180

Query: 351 SVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                + N+T     EI +    +Y  +   +  F   L  +I   + +
Sbjct: 181 KAATQVNNRTLTAPTEIFITIAVLYFVICYCLTEFSRYLERRINRYQAR 229



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 37/89 (41%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           ++I      Y    +Y    L G   T  LA  G+  A  +G  VG  R+S    + W  
Sbjct: 3   WDIVFRNFDYFLIGAYPKGPLGGLAMTVILAVGGIFGAFWLGLGVGLMRISKKPSLRWPA 62

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
             ++E+ R  P L+V+F+ Y     V   
Sbjct: 63  MGFIEIIRGTPLLMVVFWFYFLAPVVFGH 91


>gi|332073151|gb|EGI83630.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
          Length = 209

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 9/212 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +     +LG+VL+       +    K    L  LY+  F   G P +V I + + L  
Sbjct: 7   ICVIFLGTILGVVLAF-----GQRSKFKPLVWLANLYVWIF--RGTPMMVQIMIAFALMH 59

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                 Q   +G        +   + +S  + A+++E VR+G+ AVP+GQ+EAA +LG+ 
Sbjct: 60  INAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIR 117

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L +   T+   T   +  
Sbjct: 118 PKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNGATTVSTTTYLPLTP 177

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L   F YL ++ ++ + +      +   +KK
Sbjct: 178 LLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 209



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V I   +  +   
Sbjct: 2   TILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQIMIAFALMHIN 61

Query: 156 LPIPD 160
            P   
Sbjct: 62  APTIQ 66


>gi|313496643|gb|ADR58009.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 229

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 112/226 (49%), Gaps = 13/226 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L           ++   + V G++L++    ++R       +A+P  YI  F   G 
Sbjct: 7   FKWLPRLAEGAVLTLELVAIAVVAGLILAIPLG-IARSSRHWYVRAVPFSYIFFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  
Sbjct: 64  PLLVQLFLVYY------GLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGA 117

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P+G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +
Sbjct: 118 LQSIPKGEIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLE 177

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  +  TII +T   +EI       YL +S M+      L   + +
Sbjct: 178 LTGMARTIIARTYLPVEIFFAAGVFYLVISFMLVQGFKLLERWLRV 223



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L    ++   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAEGAVLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 69  LFLVYYGLAQFD 80


>gi|237741768|ref|ZP_04572249.1| amino acid transport system permease [Fusobacterium sp. 4_1_13]
 gi|256845096|ref|ZP_05550554.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Fusobacterium sp. 3_1_36A2]
 gi|294785616|ref|ZP_06750904.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium sp. 3_1_27]
 gi|229429416|gb|EEO39628.1| amino acid transport system permease [Fusobacterium sp. 4_1_13]
 gi|256718655|gb|EEU32210.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Fusobacterium sp. 3_1_36A2]
 gi|294487330|gb|EFG34692.1| amino acid ABC transporter, permease/substrate-binding protein
           [Fusobacterium sp. 3_1_27]
          Length = 236

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 97/176 (55%), Gaps = 10/176 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI   +I G P +V + +   L F          +G    +P  +   IA    + A+
Sbjct: 71  IAYIYIDVIRGTPVVVQLMILANLIF----------VGALRETPILLIGGIAFGLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+  + +GQMEA  ALGL++ +  R +++PQA+++I+P L S+++ LLK +S+
Sbjct: 121 VAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFITLLKETSI 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G  DL+     I +QT + +E +L    IYL L+ +   FM ++   + + +
Sbjct: 181 IGFIGGIDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|73537419|ref|YP_297786.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72120756|gb|AAZ62942.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 223

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 18/230 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  +   L    +T+       +F  ++GIV+++     S          +   Y+S  +
Sbjct: 12  IHASPVLLQGAAITVKFALASMIFGLLVGIVVAIMGISAS-----PVLSGIARAYVS--V 64

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P LV + + Y    D           G  + P   +  + L+    A+++E +R  
Sbjct: 65  MRGTPLLVQMFVVYYGLPDL----------GINLEPT-TAGILTLTANAGAYLSESMRGA 113

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ + RGQ  AA +LGL+H +  R ++ PQA+R  +P L +  ++L+K++SL   +   +
Sbjct: 114 ILGISRGQWSAAHSLGLSHLQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTE 173

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+     II  T Q + + L    IY  LS  ++    R+ A++ L+  +
Sbjct: 174 LLRSSQEIIASTFQPLPLYLSVAAIYWLLSTGLSWVQRRIEARLTLRVTR 223



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 39/85 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T   A + MI   ++G +V    +SA+ +++ I R YV V R  P LV +F 
Sbjct: 17  VLLQGAAITVKFALASMIFGLLVGIVVAIMGISASPVLSGIARAYVSVMRGTPLLVQMFV 76

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    + +      +  N
Sbjct: 77  VYYGLPDLGINLEPTTAGILTLTAN 101


>gi|283956347|ref|ZP_06373827.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792067|gb|EFC30856.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 1336]
          Length = 261

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L + YI   LI G P LV + L Y +  
Sbjct: 68  LIISFFSLLLSIILGGVFCAFS-LSSIVFLRFLSIFYIE--LIRGTPLLVQVLLIYYIVA 124

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 125 NNLGLDN-----------RYVAGVIILSCFSAAYLAEIFRAGILSISISQLESARALGLK 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 174 EMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 233

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I +F   L  K
Sbjct: 234 YVILAITYLVLTLPINIFSRYLERK 258



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 44/87 (50%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 40  SFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFL 99

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  V + 
Sbjct: 100 SIFYIELIRGTPLLVQVLLIYYIVANN 126


>gi|209547422|ref|YP_002279340.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538666|gb|ACI58600.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 516

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 23/257 (8%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             +  + L  L            +  +   +     T+   A   V   V+G+ L++   
Sbjct: 1   MGISMNWLENLRRSFLDWDAMAEVLPSMISV-GLKNTLILAAASTVLGVVIGMALAVMGI 59

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP- 264
             SR              I T +  GLP +V I +  Q          F  IG     P 
Sbjct: 60  SQSRWLRLPA-------RIYTDIFRGLPAIVTILIIGQ---------GFARIGREIFGPS 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F    +ALS    A+I EI RSG+ +V RGQMEA  AL +++ +  RL+++PQ +R ++
Sbjct: 104 PFPLGILALSLIAGAYIGEIFRSGIQSVERGQMEACRALSMSYGQGMRLIVIPQGIRRVL 163

Query: 325 PPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           P L +Q++  +K+SSL   +G      ++  VG      TG  +  +L+    YL +++ 
Sbjct: 164 PALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVTGN-LSPLLLAGLFYLVITVP 222

Query: 381 IALFMNRLNAKIALKEK 397
           +   +N ++ ++ L ++
Sbjct: 223 LTHLVNYIDVRLRLGKQ 239



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 35/80 (43%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG  NT  LA +  +   +IG  +    +S ++ +    R+Y ++FR +P +V I  + +
Sbjct: 31  VGLKNTLILAAASTVLGVVIGMALAVMGISQSRWLRLPARIYTDIFRGLPAIVTILIIGQ 90

Query: 151 SVLSVLPIPDHSIVLPFGMF 170
               +          P G+ 
Sbjct: 91  GFARIGREIFGPSPFPLGIL 110


>gi|153010172|ref|YP_001371386.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562060|gb|ABS15557.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 215

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 14/222 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             R L F         +I   + +LG  ++       R       + L   Y+S F   G
Sbjct: 6   MQRVLPFFLEAAWVTVQISALALILGFAVAAILVA-GRLSRSPILRGLAAAYVSVF--RG 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV + +   L+F  P +       G  + P F +  I L     A+++E +R  + +
Sbjct: 63  TPCLVQLFI---LYFGGPQI-------GINLEP-FAAGVIGLGLNIGAYMSESIRGAIQS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ EAA ++G    +  R V+LPQA R +I PL    + LLK S+L   +   +L  
Sbjct: 112 VDRGQSEAARSIGFGRGQTMRFVVLPQAARLMIRPLGVNAIALLKGSALVSTISVVELTY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I  T +  EI  +   +Y+ +  ++A  ++ L+ + A
Sbjct: 172 TAQRFIGSTYKPFEIFGVAAVLYMIIIYIVARGVDLLDKRFA 213



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 9/108 (8%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q ++P+          L     T  ++   +I    +  ++ AGRLS + ++  + 
Sbjct: 3   FALMQRVLPF---------FLEAAWVTVQISALALILGFAVAAILVAGRLSRSPILRGLA 53

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
             YV VFR  P LV +F LY     +    +       G+ LN     
Sbjct: 54  AAYVSVFRGTPCLVQLFILYFGGPQIGINLEPFAAGVIGLGLNIGAYM 101


>gi|46579164|ref|YP_009972.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46448577|gb|AAS95231.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233002|gb|ADP85856.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 596

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 18/248 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F +  +   L                  GL     ++         SF +G+V+ +    
Sbjct: 358 FNWGVIADNLRTLLIWHFPNGQSDELFMGLGGLAYSLLMAVIAISVSFFIGLVVGI---- 413

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    +  +   LLYI            LI + + ++F  PVL    F         F
Sbjct: 414 -GRTSDNRICRIPCLLYIELIRGNP-----LIIVIFWIYFFIPVLFNTFF-------NVF 460

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S  IAL+ +T A++AEIVR+G+  +P GQ+EAA + GLT  +  R ++LPQA++ +IP 
Sbjct: 461 WSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTMRRIILPQALKQMIPA 520

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFM 385
           +  Q++ + K++SLA  +G  +L  V   I N+     +EI     F+Y      ++++ 
Sbjct: 521 IVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTVAFLYFICCWSMSVYA 580

Query: 386 NRLNAKIA 393
            RL  +++
Sbjct: 581 ARLERRLS 588



 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 13/272 (4%)

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP----FGMFLNNRGLSFPTLT 182
           W+ + +V+        ++  + +  V          I+      +G  L    L    +T
Sbjct: 5   WLDKTWVQYLVLCSITLLAVYYWGWVFDFGYQFQWDILFTRNTTYGTHLGLEILKGLGVT 64

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +  +      +  LG VL +     +R       +      +  F     P LV +   Y
Sbjct: 65  VRISLISSALALGLGTVLGI-----ARLSLFAPLRLTATAVVEFF--RNTPLLVQLFFWY 117

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                  +L +       T + EF    I LS YT+AF+AE++R+GL ++P+G +EAA +
Sbjct: 118 FAF--PAILPENIRELLFTGNFEFWCATIGLSVYTSAFMAEVIRAGLQSIPKGLLEAAYS 175

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            GL + +  R ++LP A R+IIPPL S++LN +KNSSLA+ VG A+L      + + T +
Sbjct: 176 SGLNYVQVLRTIILPMAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELTWQSQQVESLTFK 235

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             E       +YLSLS++I+  +N +N K+ L
Sbjct: 236 GFEATSAATVLYLSLSLLISFILNGVNGKMRL 267



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 4/125 (3%)

Query: 74  QGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           Q  + +T +++Y T +    L G   T  ++      A  +GT++G  RLS    +    
Sbjct: 38  QWDILFTRNTTYGTHLGLEILKGLGVTVRISLISSALALGLGTVLGIARLSLFAPLRLTA 97

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
              VE FRN P LV +FF Y +  ++LP     ++           +     T    A++
Sbjct: 98  TAVVEFFRNTPLLVQLFFWYFAFPAILPENIRELLFTGNFEFWCATIGLSVYTSAFMAEV 157

Query: 190 FVFSF 194
                
Sbjct: 158 IRAGL 162



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 2/199 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  +A   +  +  IG +VG GR S N++    C +Y+E+ R  P ++VIF++Y
Sbjct: 387 LGGLAYSLLMAVIAISVSFFIGLVVGIGRTSDNRICRIPCLLYIELIRGNPLIIVIFWIY 446

Query: 150 KSV--LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
             +  L                      L+        N             L+   T  
Sbjct: 447 FFIPVLFNTFFNVFWSATIALTLFTGAYLAEIVRAGIQNIPAGQVEAAYSTGLTFVQTMR 506

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                +   + +P +      IF   +L  +    +L F    +     +    +     
Sbjct: 507 RIILPQALKQMIPAIVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMVYPMEIYGTVA 566

Query: 268 SLYIALSCYTAAFIAEIVR 286
            LY       + + A + R
Sbjct: 567 FLYFICCWSMSVYAARLER 585


>gi|323267946|gb|EGA51425.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
          Length = 245

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F                       + LP + +  F+ FG   
Sbjct: 20  MTVGLAVCALIIGLALAMFFAVWESVKWRPIAWIGSALVTILRGLPEILVVLFIYFGSSQ 79

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + LH     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 80  LLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 138

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 139 SGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 198

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 199 KSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRFERR 243


>gi|296314052|ref|ZP_06863993.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria polysaccharea ATCC 43768]
 gi|296839302|gb|EFH23240.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria polysaccharea ATCC 43768]
          Length = 248

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DKPVLGQFNFIGGSTVSPEF 266
              +   LLY++ F   G P  V I +   + F       D  ++     +         
Sbjct: 60  WALRKFSLLYVTLF--RGTPLFVQIVIWAYVWFLFFVNSSDGILVSGEAAVELRRGYGPL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +   +L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVPELSYVQKTITGRYSVYEEPLYTVALIYLLMTTFLGWIFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLEKRYNPQHR 248


>gi|229031184|ref|ZP_04187194.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
 gi|228730223|gb|EEL81193.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
          Length = 222

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 115/231 (49%), Gaps = 15/231 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + + +    +   +  +T+       + SFV+GI L++     ++  +       P+
Sbjct: 2   KFDVTYFLESFPQLFKYVYITLGITLVSMIISFVIGIGLAIVTKNKTKFLY-------PI 54

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +      G P LV +   + L+F  P +         TV     +  I LS   AA++
Sbjct: 55  VRVYISFFRGTPLLVQL---FVLYFGLPQI-----FPTFTVLTAMQATLIGLSLNNAAYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R  L AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+
Sbjct: 107 SEIIRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLS 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            A+G A++++    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 167 FALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    MI + +IG  +     +  K +  I RVY+  FR  P LV +F LY  +  +
Sbjct: 22  TLGITLVSMIISFVIGIGLAIVTKNKTKFLYPIVRVYISFFRGTPLLVQLFVLYFGLPQI 81

Query: 156 LPIPDHSIVLP 166
            P       + 
Sbjct: 82  FPTFTVLTAMQ 92


>gi|227501796|ref|ZP_03931845.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           accolens ATCC 49725]
 gi|227077821|gb|EEI15784.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           accolens ATCC 49725]
          Length = 317

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            +  +   +L +  +   +    FG     + L    + +       I + S ++G+V  
Sbjct: 32  WLCAVVLLILGLWFVIASARNEAFGWDTYFQYLFDQRIAIASLHTIAITILSMIIGVVGG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
                + R       +A+   +I  ++  G P  V +     L   +    LG       
Sbjct: 92  AIL-AVMRMSPNPILRAIS--WIFLWIFRGTPIYVQLVFWGLLSAIYQSINLGFAEVSLQ 148

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S ++  F    + L    AA++AEIVRSG+ +VP GQ EA+ ALG++     R  +LPQA
Sbjct: 149 SVLTNAFFLAVMGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMSWWMTMRRTVLPQA 208

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  +++++LLK SSL VA+ +  ++      I     Q I ++++    YL ++
Sbjct: 209 MRIIIPPTGNEFISLLKTSSLVVAIPYTHEIFGRATDISAALFQPIPLLMVAASWYLVIT 268

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +    L         +
Sbjct: 269 SLLMVGQYFLERHFERGATR 288



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 83  SSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +Y   +      +  ++T  +    MI   + G ++   R+S N ++  I  +++ +FR
Sbjct: 58  DTYFQYLFDQRIAIASLHTIAITILSMIIGVVGGAILAVMRMSPNPILRAISWIFLWIFR 117

Query: 138 NIPPLVVIFFLY 149
             P  V + F  
Sbjct: 118 GTPIYVQLVFWG 129


>gi|307320801|ref|ZP_07600211.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306893511|gb|EFN24287.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 290

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 9/255 (3%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +  L+  ++    +                 L     T+           VLG+V+++  
Sbjct: 37  VLLLFAGLVRAFSVGQIEWSYVRDFLFAPAILVGLYNTLLMTVAAMGLGIVLGVVIAIM- 95

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTV 262
               R        ++ + YI  F   G P L+ + L + L    P L            V
Sbjct: 96  ----RISGNPVLSSIAIGYIWVF--RGAPALLQLMLWFNLALIFPTLGIPGLFEFRTVDV 149

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F++  + L     A+ +E+VRSGL++V  GQ EAA  +G+T     R ++LPQAMR 
Sbjct: 150 MTPFVAAVLGLGISQGAYTSEVVRSGLLSVDSGQYEAARTIGMTQMMMLRRIVLPQAMRV 209

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PP+ ++ + ++K +SLA  + +++++     I     + +E++L+  F YL +  +++
Sbjct: 210 MVPPVGNEVIGMVKLTSLASVIQYSEILHNAQIIYFANTRVLELLLVASFWYLLVVSVLS 269

Query: 383 LFMNRLNAKIALKEK 397
           +  + +        K
Sbjct: 270 IGQHYIERYFGRGSK 284



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 41/84 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + Q    Y  D  +A AILVG  NT  +  + M    ++G ++   R+S N +++ I 
Sbjct: 48  FSVGQIEWSYVRDFLFAPAILVGLYNTLLMTVAAMGLGIVLGVVIAIMRISGNPVLSSIA 107

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVL 153
             Y+ VFR  P L+ +   +   L
Sbjct: 108 IGYIWVFRGAPALLQLMLWFNLAL 131


>gi|303246865|ref|ZP_07333142.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491882|gb|EFL51762.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 231

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 14/242 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +  + I   F  FL       P   +     + V        L L    L R   +   +
Sbjct: 1   MHWNVIYNNFDYFLIGGYPRGPLGGLAMTVLLAVGGIFGAFWLGL-GCGLLRISKKPLLR 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              L+YI   +I G+P L    + +  +F  PVL            PE  S  IAL  +T
Sbjct: 60  WPALIYIE--IIRGIPLL---MVVFWFYFLAPVLFGHTL-------PEAQSALIALIVFT 107

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+IAEIVR+G+ A+P+GQMEAA   GL+H +A   V+LPQA+ ++IP   +Q+++L K+
Sbjct: 108 SAYIAEIVRAGVQALPKGQMEAARGTGLSHFQAMTHVILPQALFNMIPSFVNQFVSLTKD 167

Query: 338 SSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SLA  +G  +L      + N+T     EI +    +Y  +   +      L   I   +
Sbjct: 168 TSLAFIIGVNELTKAATQVNNRTLTAPTEIFITIALLYFVICFCLTELSRWLEKHINRYQ 227

Query: 397 KK 398
            +
Sbjct: 228 AR 229



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 35/81 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y     Y    L G   T  LA  G+  A  +G   G  R+S   L+ W   +Y+E+ R
Sbjct: 11  DYFLIGGYPRGPLGGLAMTVLLAVGGIFGAFWLGLGCGLLRISKKPLLRWPALIYIEIIR 70

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
            IP L+V+F+ Y     +   
Sbjct: 71  GIPLLMVVFWFYFLAPVLFGH 91


>gi|258543562|ref|YP_003188995.1| amino acid ABC transporter permease [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634640|dbj|BAI00616.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637696|dbj|BAI03665.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640750|dbj|BAI06712.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643805|dbj|BAI09760.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646860|dbj|BAI12808.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649913|dbj|BAI15854.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652903|dbj|BAI18837.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655957|dbj|BAI21884.1| amino acid transport permease protein [Acetobacter pasteurianus IFO
           3283-12]
          Length = 519

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +     +     Y+   ++ G P L+ +   +   +  P         G +++P F++
Sbjct: 341 RLYGPTPLRWAATTYVE--VVRGTPLLIQVLFIF---YGLPEF-------GISLTP-FLA 387

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             ++L    AA+ AE  R+GL +V  GQMEAA+AL +TH +A R V++PQA R ++P +T
Sbjct: 388 GVVSLGMNYAAYEAENYRAGLQSVAHGQMEAALALNMTHAQALRYVVVPQAFRLVMPVMT 447

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++LLK+SSL   +   +L      + +         L+    YL L +         
Sbjct: 448 NDFISLLKDSSLVSVITLTELTQTYIRLSSSYFDYFGTGLMVGAAYLLLGLPFVRLARMA 507

Query: 389 NAKIALKEKK 398
             K+A    +
Sbjct: 508 EKKLAQPHMR 517



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 61/193 (31%), Gaps = 8/193 (4%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++   M+ A   G  +   RL     + W    YVEV R  P L+ + F++  +   
Sbjct: 319 TLLVSLCAMVLAVGAGLALALLRLYGPTPLRWAATTYVEVVRGTPLLIQVLFIFYGLPEF 378

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
                  +     + +N              +   V    +   L+L  T      +   
Sbjct: 379 GISLTPFLAGVVSLGMNYAAYEAENYRAGLQS---VAHGQMEAALALNMTHAQALRYVVV 435

Query: 216 GKAL----PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG-GSTVSPEFMSLY 270
            +A     P++      +    +LV +    +L      L    F   G+ +      L 
Sbjct: 436 PQAFRLVMPVMTNDFISLLKDSSLVSVITLTELTQTYIRLSSSYFDYFGTGLMVGAAYLL 495

Query: 271 IALSCYTAAFIAE 283
           + L     A +AE
Sbjct: 496 LGLPFVRLARMAE 508


>gi|307262089|ref|ZP_07543743.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868268|gb|EFN00091.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 238

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 13/245 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +++L  +P  D + V            +   +++      F+    + + ++L     
Sbjct: 1   MLENLLLQIPFMDEARVKLVMDAFLPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +   A+  +YIS  +I G P LV I++ +                         
Sbjct: 61  VNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY-----------GLPAIGVYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R  +PPL
Sbjct: 108 AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++ L   +
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAK 227

Query: 388 LNAKI 392
           L  + 
Sbjct: 228 LERRF 232


>gi|317046629|ref|YP_004114277.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948246|gb|ADU67721.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 251

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 18/213 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +F+F +GI+L L     +R    +        ++       L  + L+ + +  +F
Sbjct: 36  LLAVLFAFPVGILLGL-----ARLSPWRWLSWPATCWVYL-----LRGIPLMMVVFWTYF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   N  G       F ++   L  Y +A+IAEIVR G+ A+P GQ EAA ALG+ 
Sbjct: 86  CVPLLIGHNISG-------FSTMLCTLVIYESAYIAEIVRGGIQALPHGQYEAARALGMG 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
           H K  RLV+LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   +  +
Sbjct: 139 HIKTLRLVILPQALFNTLPSLVSQLVSIIKDSTLGYVINVPELTFAANQVSNQLLTKPFQ 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  I    Y  +   +    N+L A++A K ++
Sbjct: 199 VFAIVALSYYIICFSLTWLANQLEARLAQKRRQ 231



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 37/77 (48%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  ++   ++ A  +G L+G  RLS  + ++W    +V + R IP ++V+F+ Y
Sbjct: 25  LGGVLCTLLISLLAVLFAFPVGILLGLARLSPWRWLSWPATCWVYLLRGIPLMMVVFWTY 84

Query: 150 KSVLSVLPIPDHSIVLP 166
             V  ++          
Sbjct: 85  FCVPLLIGHNISGFSTM 101


>gi|170696019|ref|ZP_02887157.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139099|gb|EDT07289.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 225

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   +           +     + + SF +G+ L+ F   L R F  K   A    Y
Sbjct: 1   MPAWLHLMAQSLWPLLYAGLVFTVPLTLASFAIGLALA-FIVALVRLFGPKWAVAAVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F   G P LV + + +                   V     +  I  S    A+ +E
Sbjct: 60  VWLF--RGSPLLVQLFVIFY-----------GLPNVGIVLDPLTAAIIGFSLNVGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P+GQ EAA ++G+T  +A R  +LPQA R  +PPL++ ++ L+K++SLA  
Sbjct: 107 VIRGVIESIPKGQWEAAYSMGMTREQALRRAILPQATRVALPPLSNSFIALVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I + T + + +      +YL  S +++    RL  K   
Sbjct: 167 LTVPEVFQAAQRIASVTYEPLILYTEAALVYLLFSSVLSSAQVRLERKFGR 217



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 35/94 (37%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S    +  G V T  L  +       +  +V   RL   K      R YV +FR 
Sbjct: 6   HLMAQSLWPLLYAGLVFTVPLTLASFAIGLALAFIVALVRLFGPKWAVAAVRFYVWLFRG 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P LV +F ++  + +V  + D       G  LN
Sbjct: 66  SPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLN 99


>gi|121534020|ref|ZP_01665846.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermosinus carboxydivorans Nor1]
 gi|121307531|gb|EAX48447.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermosinus carboxydivorans Nor1]
          Length = 217

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 94/184 (51%), Gaps = 9/184 (4%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            + G     + +  +L+ G P ++ +   Y   F  P +            P+F +  +A
Sbjct: 42  SRFGVLRGAVGVYIWLLRGTPLMLQLLFVY---FGLPFIPYIG-----VRLPDFPAAVVA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
                AA+ AEI R+G+ ++ RGQ EAA ALG+T+ +  R ++LPQ ++ ++PP++++ +
Sbjct: 94  FVLNYAAYFAEIFRAGIQSIDRGQYEAAKALGMTYVQTMRRIILPQVVKRVLPPVSNETI 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+K++SL   +   DL+    +I+ +        ++    YL +++++     +L  + 
Sbjct: 154 TLVKDTSLIYVLAMNDLLRTARSIVQRDFNT-TAFIVAAVFYLVMTLVLTWLFQKLEQRY 212

Query: 393 ALKE 396
           A+ +
Sbjct: 213 AVYD 216


>gi|296333449|ref|ZP_06875902.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305675045|ref|YP_003866717.1| high affinity arginine ABC transporter permease [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296149647|gb|EFG90543.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305413289|gb|ADM38408.1| High affinity arginine ABC transporter (permease) [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 219

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + F    +    KI + S ++G++L +    L +    +    +   Y 
Sbjct: 1   MNLDFSATIPQIPFILEGLAITLKIVIVSAIIGLILGIVL-SLCKISTFRPLIWIADFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + + Y   F  P L  F          +F +  +ALS  +AA+++EI
Sbjct: 60  SVF--RGTPLVLQLMIVY---FGLPQLLGFQI-------DQFWAAVVALSLNSAAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ A+ +GQ EAA+ALG+ + K  + +LLPQA ++I P + ++ + L K S++   +
Sbjct: 108 IRAGINAIDKGQKEAAVALGVPYGKMMKDLLLPQAFKNISPAIVNELITLTKESAIVTVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  D++         T   +E ++I   IY  L +++      +  K+ 
Sbjct: 168 GLGDVMRRAYQSGAATYNYLEPLIIAGLIYYVLVLILTFIGKAVERKLK 216



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 35/88 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++       IL G   T  +     I   I+G ++   ++S  + + WI   Y  VF
Sbjct: 3   LDFSATIPQIPFILEGLAITLKIVIVSAIIGLILGIVLSLCKISTFRPLIWIADFYTSVF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           R  P ++ +  +Y  +  +L        
Sbjct: 63  RGTPLVLQLMIVYFGLPQLLGFQIDQFW 90


>gi|251795092|ref|YP_003009823.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247542718|gb|ACS99736.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 223

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 17/236 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +     F     +   +    T++ +    +   VLG ++SL                  
Sbjct: 5   YHWDFSFLNDYGSYYWTGIKKTLEVSLLAVLSGLVLGTLVSLLRLSGLWLLRF------- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +  +   ++ G P LV + L Y   +  P+   F+          F + Y+ L+  + A+
Sbjct: 58  IGTVYVEIVRGTPLLVQLFLFY---YGLPIFLGFDI-------GIFTAAYLTLTVNSGAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEI+R+G+ AV +GQMEAA +LG++   A R ++LPQA ++++P L ++++ ++K SS+
Sbjct: 108 IAEIMRAGIQAVDKGQMEAARSLGMSKGLAMRQIILPQAFKNVLPALGNEFVVVVKESSV 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              VG+A+L      I   T  +IE +L+   IY  L   ++  +     ++   +
Sbjct: 168 LSVVGYAELTYQANAIRGATFISIEPMLVSALIYFVLIFTLSKLLGIGERRLKTSD 223



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 37/76 (48%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++  + Y +    G   T  ++   ++   ++GTLV   RLS   L+ +I  VYVE+ R
Sbjct: 8   DFSFLNDYGSYYWTGIKKTLEVSLLAVLSGLVLGTLVSLLRLSGLWLLRFIGTVYVEIVR 67

Query: 138 NIPPLVVIFFLYKSVL 153
             P LV +F  Y  + 
Sbjct: 68  GTPLLVQLFLFYYGLP 83


>gi|251782901|ref|YP_002997204.1| arginine transport system permease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242391531|dbj|BAH81990.1| arginine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|322412233|gb|EFY03141.1| Putative amino acid ABC transporter [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 228

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 120/232 (51%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F             +T+  +A +  F  ++G++++L      +    K    L   
Sbjct: 1   MDLSFLPKYWAYFNYGVLVTIMISASVVFFGTIIGVLVTLI-----KRTQIKPLTWLVNT 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF++     F  +  +      +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMHFNQMPTIGFGVL--NLDFSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  R A R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPRNAMRYVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   ++   T   I  +L+  F YL ++ +++  +  L  ++A
Sbjct: 172 QTIGVMELWNGAQSVATATYSPIAPLLVAAFYYLMVTTVLSQLLAVLERRMA 223



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++ S +   TIIG LV   + +  K + W+   YV +FR  P +V 
Sbjct: 9   YWAYFNYGVLVTIMISASVVFFGTIIGVLVTLIKRTQIKPLTWLVNTYVWIFRGTPMVVQ 68

Query: 145 IFFLYKSV 152
           I   +  +
Sbjct: 69  IMIAFAWM 76


>gi|307729124|ref|YP_003906348.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583659|gb|ADN57057.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 225

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 99/231 (42%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   +           +     + + SF +G+ L+ F   L R F  K   A    Y
Sbjct: 1   MPAWLHLMAQSLWPLLYAGLVFTVPLTLASFAIGLALA-FIVALVRLFGPKWAVAAVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F   G P LV + + +                   V     +  I  S    A+ +E
Sbjct: 60  VWLF--RGSPLLVQLFVIFY-----------GLPNVGIVLDPLTAAIIGFSLNVGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P+GQ EAA ++G+T  +A R  +LPQA R  +PPL++ ++ L+K++SLA  
Sbjct: 107 VIRGVIESIPKGQWEAAYSMGMTREQALRRAILPQAARVALPPLSNSFIALVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I + T + + +      +YL  S +++    RL  K   
Sbjct: 167 LTVPEVFQAAQRIASVTYEPLILYTEAALVYLLFSSVLSSAQVRLERKFGR 217



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 35/94 (37%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S    +  G V T  L  +       +  +V   RL   K      R YV +FR 
Sbjct: 6   HLMAQSLWPLLYAGLVFTVPLTLASFAIGLALAFIVALVRLFGPKWAVAAVRFYVWLFRG 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P LV +F ++  + +V  + D       G  LN
Sbjct: 66  SPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLN 99


>gi|241663975|ref|YP_002982335.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240866002|gb|ACS63663.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 222

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/130 (33%), Positives = 82/130 (63%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            + P F+   + L  Y+ A+++EIVR  + +V RGQMEAA ++G++  ++ R ++LPQA+
Sbjct: 84  ILLPAFVCGVLGLGVYSGAYVSEIVRGAIQSVDRGQMEAARSIGMSSAQSMRAIILPQAV 143

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
             +IPPL ++++ L+KNS+L   +   DL+  G  II+ + +++E+ L    +YL L+  
Sbjct: 144 VRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISVSYRSLEVYLAIALVYLVLTSA 203

Query: 381 IALFMNRLNA 390
            +  ++RL  
Sbjct: 204 ASYLLHRLER 213


>gi|222153406|ref|YP_002562583.1| amino acid ABC transporter permease [Streptococcus uberis 0140J]
 gi|222114219|emb|CAR42794.1| putative amino acid ABC transporter permease protein [Streptococcus
           uberis 0140J]
          Length = 229

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 10/237 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +T+  +A +  F  ++G++++       +       K L   
Sbjct: 1   MNFSFLPEYWAYFNYGVIVTIMISACVVFFGTIIGVLITFV-----KRSSFTPLKWLANF 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+   +   NF          +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMHFNN--MPTVNFGVLDLDFSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPKNAMRYVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G  +L +   T++  T   I  +L   F YL ++ +++  +  L  K+    KK
Sbjct: 172 QTIGVMELWNGAQTVVTSTYLPITPLLFAAFYYLMVTTVLSYLLTILENKMGQGVKK 228



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 32/74 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    Y      G + T  ++   +   TIIG L+   + S+   + W+   YV +FR 
Sbjct: 3   FSFLPEYWAYFNYGVIVTIMISACVVFFGTIIGVLITFVKRSSFTPLKWLANFYVWIFRG 62

Query: 139 IPPLVVIFFLYKSV 152
            P +V I   +  +
Sbjct: 63  TPMVVQIMIAFAWM 76


>gi|89899050|ref|YP_521521.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343787|gb|ABD67990.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 217

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++F    ++  +L L    L R              I+T  I G+P LV +   Y  
Sbjct: 22  VTVEVFACGLIVATLLGLV-WALMRVSGVAALAVFSKGLINT--IRGIPILVQLFFIY-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F + +I L    + ++AE+ R G+ AV  GQ+EAA +LG
Sbjct: 77  ---------FVLPDVGIQLSAFQAGFIGLGFAYSCYMAEVFRGGIEAVDPGQVEAAKSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +        V+LPQA +  +PP  +  + L+K++S A  +   +L      I   T +  
Sbjct: 128 MGRAMTMWRVVLPQAFKVALPPYGNTCIMLIKDTSQASIITVTELTFQSKVIAASTFKNA 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E+  +    YL L I + + + RL  +   
Sbjct: 188 EVFTLVALFYLLLCIPLIMIVGRLEKRFGR 217



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  +  G V T  +   G+I AT++G +    R+S    +A   +  +   R IP LV 
Sbjct: 12  FAPILAQGAVVTVEVFACGLIVATLLGLVWALMRVSGVAALAVFSKGLINTIRGIPILVQ 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +FF+Y  +  V            G+
Sbjct: 72  LFFIYFVLPDVGIQLSAFQAGFIGL 96


>gi|307255512|ref|ZP_07537318.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307257682|ref|ZP_07539441.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307259963|ref|ZP_07541676.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861554|gb|EFM93542.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306863857|gb|EFM95781.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865991|gb|EFM97866.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 238

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +++L  +P  D + V            +   +++      F+    + + ++L     
Sbjct: 1   MLENLLLQIPFMDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +   A+  +YIS  +I G P LV I++ +                         
Sbjct: 61  VNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY-----------GLPAIGVYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R +IPPL
Sbjct: 108 AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVVIPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++ L   +
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAK 227

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 228 LERRFNR 234


>gi|256027814|ref|ZP_05441648.1| amino acid ABC transporter permease [Fusobacterium sp. D11]
 gi|289765767|ref|ZP_06525145.1| amino acid transport system permease [Fusobacterium sp. D11]
 gi|289717322|gb|EFD81334.1| amino acid transport system permease [Fusobacterium sp. D11]
          Length = 236

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 97/176 (55%), Gaps = 10/176 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI   +I G P +V + +   L F          +G    +P  +   IA    + A+
Sbjct: 71  IAYIYIDVIRGTPVVVQLMILANLIF----------VGALRETPILVIGGIAFGLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+  + +GQMEA  ALGL++ +  R +++PQA+++I+P L S+++ LLK +S+
Sbjct: 121 VAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFIALLKETSI 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G  DL+     I +QT + +E +L    IYL L+ +   FM ++   + + +
Sbjct: 181 IGFIGGIDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|218676308|ref|YP_002395127.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32]
 gi|218324576|emb|CAV26094.1| ABC transporter: transmembrane protein [Vibrio splendidus LGP32]
          Length = 266

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 19/276 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
              ++ + ++ V V   +  L               +PD+      G +     +    +
Sbjct: 8   KPALSALVQIVVLVAAVVWILDSGAQTMGYSWQWERVPDYIAFYEDGEWWPAELVEGLLV 67

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T++ +    V + ++G+  +L      R+ +   G+ L   Y+   LI   P LV I L 
Sbjct: 68  TINISLISLVATLIIGLTTALL-----RNSNSVVGRTLATSYVE--LIRNTPLLVQIYLL 120

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y +             G       F +  +AL+ +  A+ AEI R+GL  + RGQ EAA 
Sbjct: 121 YFVF------------GPVLGLDRFSTAVLALALFQGAYTAEIFRAGLNGIARGQFEAAQ 168

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+       V+LPQ ++  +PPLT++ ++L+KNSS+   +   DL +    I+++T 
Sbjct: 169 SLGLSKTYTYWDVILPQVVQRTLPPLTNEVISLIKNSSIVSVMAIFDLTTEARNIVSETA 228

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              EI      IYL+L++ ++     L  K+    +
Sbjct: 229 MPFEIWFSVAIIYLALTLSLSAVAAWLEHKLGANWR 264



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 13/123 (10%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           ++  ++L    +W +++    M       G  +  ER         + +  D  +  A L
Sbjct: 14  LVQIVVLVAAVVWILDSGAQTM-------GYSWQWER-----VPDYIAFYEDGEWWPAEL 61

Query: 91  V-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           V G + T  ++   ++   IIG      R S + +   +   YVE+ RN P LV I+ LY
Sbjct: 62  VEGLLVTINISLISLVATLIIGLTTALLRNSNSVVGRTLATSYVELIRNTPLLVQIYLLY 121

Query: 150 KSV 152
              
Sbjct: 122 FVF 124


>gi|313888661|ref|ZP_07822326.1| ABC transporter, permease protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845390|gb|EFR32786.1| ABC transporter, permease protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 256

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 11/227 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-IS 225
           +G       ++   + +      F+   ++ IV +    + S  F     K L ++  I 
Sbjct: 16  YGPLFVEGTINTIIIAVVGTLIGFLIGLLIAIVRTTKVNKKSSAFKRVGLKILNVIISIY 75

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I G P +V   + Y        L                S  I +S  T A++AEI+
Sbjct: 76  IQVIRGTPMMVQAMMFYYGSLQYFNLN----------MAAMPSALIIVSVNTGAYMAEII 125

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+I+V RGQ E A+++G+TH +    V+LPQA+R+IIP + ++++  +K+SS+   + 
Sbjct: 126 RGGIISVDRGQTEGALSIGMTHWQTMTEVVLPQAVRNIIPSVGNEFIVNIKDSSVLNVIS 185

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++L  +  +      +  E+  I   IYL L+I ++  M  +  K+
Sbjct: 186 VSELFFISKSAAGTYLRYFEVFFITALIYLFLTISVSQAMKLVEKKL 232



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 12/84 (14%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN------------KLVAWICRVY 132
           Y    + G +NT  +A  G +   +IG L+   R +              K++  I  +Y
Sbjct: 16  YGPLFVEGTINTIIIAVVGTLIGFLIGLLIAIVRTTKVNKKSSAFKRVGLKILNVIISIY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVL 156
           ++V R  P +V     Y   L   
Sbjct: 76  IQVIRGTPMMVQAMMFYYGSLQYF 99


>gi|295676370|ref|YP_003604894.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295436213|gb|ADG15383.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 219

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           K  + S + G++       L    H +    +  +Y+S  ++ G P L
Sbjct: 11  LPVLAQGALLTIKFAILSMIFGLIGGAML-ALMGISHSRPLNWIARVYVS--VMRGTPLL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y               G S       +  IALS   AA+++E +R  ++ + +G
Sbjct: 68  VQIFVIYY---------GLPSFGISLEPTP--AGVIALSANVAAYLSESMRGAILGIHQG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  A+ +LGL+ R+  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     
Sbjct: 117 QWLASYSLGLSRRQTLRYVIAPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQE 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  T Q + + L    +Y  L  ++         +++L  + 
Sbjct: 177 MIASTYQPLPLYLAAAAVYWVLCQVLEWAQRWYERRLSLPTRH 219



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 33/70 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + T   A   MI   I G ++    +S ++ + WI RVYV V R  P LV IF 
Sbjct: 13  VLAQGALLTIKFAILSMIFGLIGGAMLALMGISHSRPLNWIARVYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  + S   
Sbjct: 73  IYYGLPSFGI 82


>gi|229074425|ref|ZP_04207457.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-18]
 gi|228708709|gb|EEL60850.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-18]
          Length = 218

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 118/220 (53%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++ +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWVGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWVGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|307250883|ref|ZP_07532811.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306857133|gb|EFM89261.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 238

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +++L  +P  D + V            +   +++      F+    + + ++L     
Sbjct: 1   MLENLLLQIPFMDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +   A+  +YIS  +I G P LV I++ +                         
Sbjct: 61  VNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY-----------GLPAIGVYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R  +PPL
Sbjct: 108 AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++ L   +
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAK 227

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 228 LERRFNR 234


>gi|306825587|ref|ZP_07458926.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431948|gb|EFM34925.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 227

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 110/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +F   LG ++ +     ++    K       +Y+  F   G 
Sbjct: 7   PKYLPYFNYGALITVLISIFVVCLGTIIGVLL-AFAQRSRFKPLVWFANVYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQVGILG--VDLSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      I   +KK
Sbjct: 182 ATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFEKHIGQGDKK 227



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++   +   TIIG L+   + S  K + W   VYV +FR  P +V 
Sbjct: 9   YLPYFNYGALITVLISIFVVCLGTIIGVLLAFAQRSRFKPLVWFANVYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|116254671|ref|YP_770507.1| putative transmembrane ABC transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259319|emb|CAK10454.1| putative transmembrane ABC transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 591

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +     +   + S+   P     +    F     L     T+       +   +LG  L+
Sbjct: 40  IFAAVVITAVLYSIFTNPRWGWGVFAEWFFAEPVLVGLGRTLLLTVLAAISGSILGTALA 99

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGS 260
           L     S      +   + LL     ++  L    L  L   +    P     F      
Sbjct: 100 LARVSRSPLLSGLSWGYIWLLRSIPVIVLLLILNNLGYLYETIKIGIPFTDTVFLDYPTV 159

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F + ++ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAM
Sbjct: 160 QLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAM 219

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           RSI+P   ++ + L K++S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 220 RSILPTGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTV 279

Query: 381 IALFMNRLNAKIALKEKK 398
           +++    +    +    +
Sbjct: 280 LSIAQRYIERYFSKGAVR 297



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 20/210 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-----PLVV 144
           LVG   T  L     I  +I+GT +   R+S + L++ +   Y+ + R+IP      ++ 
Sbjct: 74  LVGLGRTLLLTVLAAISGSILGTALALARVSRSPLLSGLSWGYIWLLRSIPVIVLLLILN 133

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL---- 200
                   + +      ++ L +         +   L +  N   F    V G +L    
Sbjct: 134 NLGYLYETIKIGIPFTDTVFLDYPTVQLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDH 193

Query: 201 -------SLFATRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                  +L   R  + F     +A    LP  +     +    ++V +    +L +   
Sbjct: 194 GQLEAAAALGLPRRRQAFRIVLPQAMRSILPTGFNELIGLAKSTSMVYVLALPELFYTVQ 253

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           V+ + N      +    +   I ++  + A
Sbjct: 254 VIYRRNLEVIPLLMVATVWYLIIMTVLSIA 283


>gi|302187471|ref|ZP_07264144.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 229

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   +   G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVTAGLILAI-PMGIARASRHWPVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF  +  S + P     F    + ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 120 AVPPGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T   +EI       YL ++ ++      L   + +
Sbjct: 180 GMARTIIARTYLPVEIFFAAGMFYLVMTFVLVQGFRLLEKLLRV 223



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 30/82 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +    I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVTAGLILAIPMGIARASRHWPVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +   ++   
Sbjct: 69  LFLVYYGLAQFESVRQSALWPY 90


>gi|89072735|ref|ZP_01159300.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium sp. SKA34]
 gi|89051555|gb|EAR57009.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium sp. SKA34]
          Length = 229

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                    T   +   S V+G++ ++    + R+   K        YI  F   G P L
Sbjct: 10  WEIYLEGFYTTVWMVTVSLVIGLICAIPIG-MMRNSSNKLIAFPAWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y        L Q   + G+     +    +A    TAA+ AEI+R  + ++P+G
Sbjct: 67  IQLYLIYY------GLSQVIDVQGTMWQEAWFCALVAFILNTAAYTAEIIRGSINSMPQG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +A R ++LP A+R  +P  +++ + ++  S++A  V   DL      
Sbjct: 121 EIEAAKAYGMSPFQAFRRIILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGAARI 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+ L+  I     +L A+ 
Sbjct: 181 VNSRYYAPFESFLFAGLCYMVLTFAIIWVFKKLEARY 217



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L GF  T W+    ++   I    +G  R S+NKL+A+    Y+  FR  P L+ +
Sbjct: 10  WEIYLEGFYTTVWMVTVSLVIGLICAIPIGMMRNSSNKLIAFPAWAYIYFFRGTPLLIQL 69

Query: 146 FFLYKSVLSV 155
           + +Y  +  V
Sbjct: 70  YLIYYGLSQV 79


>gi|312958426|ref|ZP_07772946.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311286969|gb|EFQ65530.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 240

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 3/211 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+ + +  LG+VL L A  L++    K  + L   Y  + ++ G+P L+ + L Y  
Sbjct: 28  MTVKLALTALCLGLVLGL-AGALAKTSPYKPLQWLGGTY--STIVRGVPELLWVLLIYFG 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             +                  F +  IAL     A+  E++R  +I++P+G  EA +ALG
Sbjct: 85  TINAMRGLGELLDIPDLSLSAFAAGVIALGLCFGAYATEVLRGAIISIPKGHREAGVALG 144

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +    +++PQ  R  +P L + +L L+K+++L   +G  +++      +  T Q  
Sbjct: 145 LSKVRIFTRLIMPQMWRIALPGLGNLFLILMKDTALVTVIGLEEIMRHAQIAVTVTKQPF 204

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              ++   IYL L+ +  + M+ L  + A  
Sbjct: 205 TFYMVAALIYLGLTSLSMVAMHFLEKRAARG 235



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 35/83 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+  G + T  LA + +    ++G      + S  K + W+   Y  + R +P L+ 
Sbjct: 18  FGPALAAGALMTVKLALTALCLGLVLGLAGALAKTSPYKPLQWLGGTYSTIVRGVPELLW 77

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  +Y   ++ +      + +P 
Sbjct: 78  VLLIYFGTINAMRGLGELLDIPD 100


>gi|226228607|ref|YP_002762713.1| putative amino acid ABC transporter permease/substrate binding
           protein [Gemmatimonas aurantiaca T-27]
 gi|226091798|dbj|BAH40243.1| putative amino acid ABC transporter permease/substrate binding
           protein [Gemmatimonas aurantiaca T-27]
          Length = 519

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 14/190 (7%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A    R +     +A   +Y+   ++ G P L+ + + Y              + G    
Sbjct: 343 AIATGRVYGGPVLRAALSIYVE--VVRGTPVLLQLFVLYY------------GLSGVIRL 388

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  + L    AA+ +EI RS L+A+PR Q+EAA  LGLT  +  RLV  PQA+R  
Sbjct: 389 PALVAAILGLGLNYAAYESEIYRSALMAIPRAQLEAARTLGLTEWQVLRLVRGPQALRLA 448

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + P+T+ ++ LLK+SSL   +   +L          +G  +   L+   IYL +S+ ++ 
Sbjct: 449 LAPMTNDFVALLKDSSLVSVITVVELTKQTAIYATNSGSWVVPGLMCGVIYLCMSLPLSR 508

Query: 384 FMNRLNAKIA 393
              RL A+ +
Sbjct: 509 LARRLEARWS 518



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 37/75 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A+L   V T  ++ + M  A + G  +  GR+    ++     +YVEV R  P L+ 
Sbjct: 315 YLPALLRAAVITLGISLAAMALAMVAGGAIATGRVYGGPVLRAALSIYVEVVRGTPVLLQ 374

Query: 145 IFFLYKSVLSVLPIP 159
           +F LY  +  V+ +P
Sbjct: 375 LFVLYYGLSGVIRLP 389


>gi|153939214|ref|YP_001390775.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|170756000|ref|YP_001781066.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|152935110|gb|ABS40608.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|169121212|gb|ACA45048.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
 gi|295318847|gb|ADF99224.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 219

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 13/227 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     +  R L F         KI + SF++ I L+     L  +   K    +   Y+
Sbjct: 1   MELNFDIIFRNLPFLLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ +   Y                        ++  I L+   AA+++EI
Sbjct: 61  EIF--RGSPLLIQLFFIYY-----------GLPSVGIAMDAEVAAVIGLALNGAAYMSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I++ RGQ EA  +LG T  +    ++LPQA +  +PPL + + +LLK++SL   +
Sbjct: 108 IRAAIISIDRGQEEAGFSLGYTRLQNLCYIILPQAAQISVPPLVNGFSSLLKDTSLISVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L   G  I ++T +  E+ L     Y  L+ ++++    +  +
Sbjct: 168 SITELTRSGNLIYSRTARPFEVYLTLGLFYFVLTYIVSICSKFIEKR 214



 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           +L   + T  +     I A  +  +VG  R     K++  I   YVE+FR  P L+ +FF
Sbjct: 15  LLKATLVTIKITLLSFIVAITLAFIVGILRTYKFSKILDLILNAYVEIFRGSPLLIQLFF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +Y  + SV    D  +    G+ LN     
Sbjct: 75  IYYGLPSVGIAMDAEVAAVIGLALNGAAYM 104


>gi|237744915|ref|ZP_04575396.1| amino acid transport system permease [Fusobacterium sp. 7_1]
 gi|260494696|ref|ZP_05814826.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Fusobacterium sp. 3_1_33]
 gi|229432144|gb|EEO42356.1| amino acid transport system permease [Fusobacterium sp. 7_1]
 gi|260197858|gb|EEW95375.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Fusobacterium sp. 3_1_33]
          Length = 236

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 97/176 (55%), Gaps = 10/176 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI   +I G P +V + +   L F          +G    +P  +   IA    + A+
Sbjct: 71  IAYIYIDVIRGTPVVVQLMILANLIF----------VGALRETPILVIGGIAFGLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+  + +GQMEA  ALGL++ +  R +++PQA+++I+P L S+++ LLK +S+
Sbjct: 121 VAEIIRAGIEGLDKGQMEAGRALGLSYSQTMRKIIVPQAIKNILPALVSEFIALLKETSI 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G  DL+     I +QT + +E +L    IYL L+ +   FM ++   + + +
Sbjct: 181 IGFIGGIDLLRSASIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|310644683|ref|YP_003949442.1| polar amino acid uptake family abc transporter, permease protein
           [Paenibacillus polymyxa SC2]
 gi|309249634|gb|ADO59201.1| Polar amino acid uptake family ABC transporter, permease protein
           [Paenibacillus polymyxa SC2]
          Length = 238

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 7/235 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    + L      +     I   S +LG ++ L AT L R +       L  LY+S 
Sbjct: 5   FDLDYMLKSLPQIVEYLPVTLWIAFVSMLLGAIIGL-ATALIRIYKVPVLAPLSTLYVS- 62

Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIA 282
             I G P +V + L Y     F      ++ F+    V   P  +   ++ S     +++
Sbjct: 63  -YIRGTPLIVQLFLVYYGIPKFLYYFQNEYGFLQQFNVYVIPPELFALLSFSLNLGGYLS 121

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+ + +V RGQ EAA ++G++  +    ++LPQA+   +P L +  ++ +K++S   
Sbjct: 122 ETFRAAIHSVDRGQFEAANSIGMSQTQIMLKIVLPQALTVALPNLGNTLISTVKDTSFIF 181

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  D++     +  +     E+ +    IY  + I+I   +  L  +I + E+
Sbjct: 182 MIGVVDMMGQAKIMGARALAFFEVYVAVSLIYWLVCIIIERGLVVLEKRIRIYER 236



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T W+AF  M+   IIG      R+    ++A +  +YV   R  P +V +F +Y  +   
Sbjct: 24  TLWIAFVSMLLGAIIGLATALIRIYKVPVLAPLSTLYVSYIRGTPLIVQLFLVYYGIPKF 83


>gi|289627333|ref|ZP_06460287.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289650580|ref|ZP_06481923.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330870381|gb|EGH05090.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330892337|gb|EGH24998.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 229

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAI-PMGIARASRHWPVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF  +  S + P     F    + ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAIQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 120 AVPVGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T   +EI       YL ++ ++      L   + +
Sbjct: 180 GMARTIIARTYLPVEIFFAAGMFYLVMTFVLVQGFRLLEKLLRV 223



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAIPMGIARASRHWPVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +   ++   
Sbjct: 69  LFLVYYGLAQFESVRQSALWPY 90


>gi|295114882|emb|CBL35729.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [butyrate-producing
           bacterium SM4/1]
          Length = 214

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 114/213 (53%), Gaps = 11/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  I +   +LG +L++      +    +    L  +Y+   ++ G P L+ +   Y  
Sbjct: 13  LSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNTLAGIYVE--IVRGTPMLLQL---YFF 67

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+         S      +   +AL   +AA+++E++RSG+ AV +GQMEAA +LG
Sbjct: 68  YFMLPMAFP------SMNLSPIVCCAVALCLNSAAYVSEVIRSGIQAVDKGQMEAARSLG 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L HR+A   V+LPQA+++I+P L ++++ ++K++SLA      +L++V  T+      ++
Sbjct: 122 LNHRQAMVKVILPQAIKNIMPALGNEFVMMIKDTSLASTFFVGELMTVWQTVRGVLYLSL 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E ++I   IY  ++  ++  +N +  ++   E+
Sbjct: 182 ETLIIVGCIYFIVTFSLSKGINFMERRMRANER 214



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAWICRVYVEVFRNIPPLV 143
            + G   T  L+   +I  T++G L+   RLS       + +  +  +YVE+ R  P L+
Sbjct: 3   FMQGLGVTLLLSLVIVIVGTLLGFLLAMLRLSNWKIVKIRPLNTLAGIYVEIVRGTPMLL 62

Query: 144 VIFFLYKSVLSVLPIPD 160
            ++F Y  +    P  +
Sbjct: 63  QLYFFYFMLPMAFPSMN 79


>gi|222094148|ref|YP_002528205.1| amino acid ABC transporter , permease protein [Bacillus cereus Q1]
 gi|221238203|gb|ACM10913.1| amino acid ABC transporter, permease protein [Bacillus cereus Q1]
          Length = 269

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 80  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 125

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 126 GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLG 185

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 186 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 245

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 246 EKRLQRKE 253


>gi|167619033|ref|ZP_02387664.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis Bt4]
          Length = 219

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    + R  + +   A+   Y+S  L+ G P
Sbjct: 9   HTLPILARGAVLTMKFAVASMVLGLIVGLVV-AIVRIGNNRFLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y                         +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYY-----------GLPDIGISLDPTSAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHAQTLRYVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    IY  LS ++     R+  + AL
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLVRLQGRIETRCAL 215



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T   A + M+   I+G +V   R+  N+ ++ I + YV + R  P LV +F +
Sbjct: 14  LARGAVLTMKFAVASMVLGLIVGLVVAIVRIGNNRFLSAIAQGYVSLMRGTPLLVQMFVV 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +    D +    F + LN
Sbjct: 74  YYGLPDIGISLDPTSAGIFTLTLN 97


>gi|16079798|ref|NP_390622.1| glutamine ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310681|ref|ZP_03592528.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221315004|ref|ZP_03596809.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221319925|ref|ZP_03601219.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221324206|ref|ZP_03605500.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|81815748|sp|O34671|GLNM_BACSU RecName: Full=Probable glutamine ABC transporter permease protein
           glnM
 gi|2635190|emb|CAB14686.1| glutamine ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|28375454|emb|CAA93319.1| integral membrane protein [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 216

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 18/206 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 SFVLG+ +++           +     PL ++ T  +  +  + L+ + +  +F
Sbjct: 25  VIALAGSFVLGVAVAVM----------RITVFKPLQWLGTAYVEFIRNIPLLLITFVFYF 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P                F +  +AL+ YT+AFIAE +R+G+ +V +GQMEAA + G T
Sbjct: 75  GLP--------NAGLRLDGFQAGTVALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFT 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A   ++LPQA++ +IPPL +Q+LNL+KNSS+   V   DL+     + + T    ++
Sbjct: 127 YSQAMLHIILPQAIKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDV 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            +     YL L+I +++ +N L  ++
Sbjct: 187 YIFVALFYLVLTIPLSIGVNYLEKRL 212



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF +T   +   +  + ++G  V   R++  K + W+   YVE  RNIP L++ F  Y  
Sbjct: 16  GFYHTLLASVIALAGSFVLGVAVAVMRITVFKPLQWLGTAYVEFIRNIPLLLITFVFYFG 75

Query: 152 VLSV 155
           + + 
Sbjct: 76  LPNA 79


>gi|312961910|ref|ZP_07776407.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311283720|gb|EFQ62304.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 321

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R    +     L   V S+   P     +    F +   L     T+       +FS +
Sbjct: 38  WRWAGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSVLRGLGQTLLLTLLSTLFSVI 97

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
           LG  L+L     +R        AL   YI  F       +++I   +   +D  VL    
Sbjct: 98  LGTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPF 152

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F       V  +F +  + LS   AA+ AEI+R GLI V  GQ EAA ALGL   +
Sbjct: 153 TEVVFAEWSTVDVLSQFTTAVLGLSLMQAAYAAEIIRGGLIGVDAGQHEAAAALGLPASR 212

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++
Sbjct: 213 RIFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIV 272

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++      +    A    +
Sbjct: 273 ATVWYLIITTVLTSAQYYVERHFARGTAR 301



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 46/146 (31%), Gaps = 1/146 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-PLVVIFFL 148
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P  LV+I   
Sbjct: 78  LRGLGQTLLLTLLSTLFSVILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 137

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
             + L    +             +   +     T      +   ++   I+        +
Sbjct: 138 NFAYLYDHIVLGVPFTEVVFAEWSTVDVLSQFTTAVLGLSLMQAAYAAEIIRGGLIGVDA 197

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPT 234
                     LP       +I     
Sbjct: 198 GQHEAAAALGLPASRRIFRIILPQAL 223


>gi|76811247|ref|YP_332657.1| histidine transport system permease [Burkholderia pseudomallei
           1710b]
 gi|76580700|gb|ABA50175.1| histidine transport system permease protein [Burkholderia
           pseudomallei 1710b]
          Length = 492

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 88/223 (39%), Gaps = 4/223 (1%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFL 228
           +  N   +           +++    +GI   L     ++R   +K       LY  T++
Sbjct: 263 YWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWLY--TYV 320

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + L Y   +    +     +  +          +A +  T A+  EI    
Sbjct: 321 FRGTPLYVQLLLCYTGLYSLQAVRGTPMLD-AFFRDGMNCTLLAFTLNTCAYTTEIFAGA 379

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A   G++EAA A G++     R ++LP A+R  +P  +++ + +L  +++A      D
Sbjct: 380 IKATSYGEIEAARAYGMSTFTLYRRIVLPSALRRALPLYSNEVILMLHATTVAFTATVPD 439

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++ +   + + T  +     I   +YL++S  +     R   +
Sbjct: 440 ILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERR 482



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 42/126 (33%), Gaps = 6/126 (4%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A    +
Sbjct: 260 IQEYWRNYLYTDGYR---FTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWL 316

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF- 190
           Y  VFR  P  V +   Y  + S+         +    F +    +    T++T A    
Sbjct: 317 YTYVFRGTPLYVQLLLCYTGLYSL--QAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTE 374

Query: 191 VFSFVL 196
           +F+  +
Sbjct: 375 IFAGAI 380


>gi|297570733|ref|YP_003696507.1| polar amino acid ABC transporter inner membrane protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931080|gb|ADH91888.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 323

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 13/241 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +       ++ N   +        T A + V + VLGI+L++    + R       +++ 
Sbjct: 41  NPQFQWDVVWANLFKIQIVKAVGWTLA-LTVAAMVLGIILAV-TMAIMRRSENPVLRSVA 98

Query: 221 LLYISTF----LIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPE-----FMSLY 270
             YI  F    +   L    LI   +  +    P +  F     +T+  E     F+   
Sbjct: 99  TAYIWFFRGTPIYTQLIFWGLIGTLFPTITVGIPGVIDFFTFAPNTIFAERQYTMFLFAV 158

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A++AEIVRSGL +V  GQ EAA ALG+++    R ++LPQAMR I+PP  ++
Sbjct: 159 LGLGLNEGAYLAEIVRSGLNSVDPGQEEAAKALGMSNGMILRRIVLPQAMRVIVPPTGNE 218

Query: 331 YLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +++LK +SL  AV  + +L  V       + + I  +++    YL ++ ++ +    L 
Sbjct: 219 TISMLKTTSLVTAVPLSLELTHVTNASGFSSFKPIPFLIVAAIWYLVITSVLMVGQYYLE 278

Query: 390 A 390
            
Sbjct: 279 K 279



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/113 (14%), Positives = 30/113 (26%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+     T  L  + M+   I+   +   R S N ++  +   Y+  FR  P    + F 
Sbjct: 58  IVKAVGWTLALTVAAMVLGIILAVTMAIMRRSENPVLRSVATAYIWFFRGTPIYTQLIFW 117

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
                    I      +          +            +       G  L+
Sbjct: 118 GLIGTLFPTITVGIPGVIDFFTFAPNTIFAERQYTMFLFAVLGLGLNEGAYLA 170


>gi|167855090|ref|ZP_02477863.1| polar amino acid ABC transporter, inner membrane subunit
           [Haemophilus parasuis 29755]
 gi|167853828|gb|EDS25069.1| polar amino acid ABC transporter, inner membrane subunit
           [Haemophilus parasuis 29755]
          Length = 238

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 13/248 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +  ++L  LP    + V            +   +++      F+    + + ++L     
Sbjct: 1   MLNNLLLSLPFMTEARVELVINGFWPMVQAAFLVSIPLAIASFIIGMAIAVGVALVRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +        YIS  +I G P LV I + +   +  P +G F             
Sbjct: 61  VNGPFHRLLLWFVKGYIS--IIRGTPMLVQICIVF---YGLPAIGIF--------IDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E +R+ +++VP+GQ EA   +G+T+ +  R ++ PQA R  +PPL
Sbjct: 108 AAIIGFSINIGAYGSETIRAAILSVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++     R
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFFIQAR 227

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 228 LEKRFDRY 235


>gi|321312270|ref|YP_004204557.1| glutamine ABC transporter permease [Bacillus subtilis BSn5]
 gi|320018544|gb|ADV93530.1| glutamine ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 216

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 18/206 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 SFVLG+ +++           +     PL ++ T  +  +  + L+ + +  +F
Sbjct: 25  VIALAGSFVLGVAVAVM----------RITVFKPLQWLGTVYVEFIRNIPLLLITFVFYF 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P                F +  +AL+ YT+AFIAE +R+G+ +V +GQMEAA + G T
Sbjct: 75  GLP--------NAGLRLDGFQAGTVALTIYTSAFIAEAIRAGIQSVSKGQMEAARSSGFT 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A   ++LPQA++ +IPPL +Q+LNL+KNSS+   V   DL+     + + T    ++
Sbjct: 127 YSQAMLHIILPQAIKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDV 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            +     YL L+I +++ +N L  ++
Sbjct: 187 YIFVALFYLVLTIPLSIGVNYLEKRL 212



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF +T   +   +  + ++G  V   R++  K + W+  VYVE  RNIP L++ F  Y  
Sbjct: 16  GFYHTLLASVIALAGSFVLGVAVAVMRITVFKPLQWLGTVYVEFIRNIPLLLITFVFYFG 75

Query: 152 VLSV 155
           + + 
Sbjct: 76  LPNA 79


>gi|228940614|ref|ZP_04103180.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228973534|ref|ZP_04134118.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228980092|ref|ZP_04140408.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228779678|gb|EEM27929.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228786229|gb|EEM34224.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228819120|gb|EEM65179.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326941247|gb|AEA17143.1| cystine transport system permease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 222

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 119/231 (51%), Gaps = 15/231 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + + +    +   +  +T+       + SFV+GI L++     +++ +     ++  
Sbjct: 2   KFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKYLY-----SIAR 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS F   G P LV +   + L+F  P +         TV     +  I LS   AA++
Sbjct: 57  VYISFF--RGTPLLVQL---FVLYFGLPQI-----FPTFTVLTAMQATLIGLSLNNAAYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R  L AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+
Sbjct: 107 SEIIRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLS 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            A+G A++++    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 167 FALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217



 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    MI + +IG  +     +  K +  I RVY+  FR  P LV +F LY  +  +
Sbjct: 22  TLGITVVSMIISFVIGIGLAIITKNKTKYLYSIARVYISFFRGTPLLVQLFVLYFGLPQI 81

Query: 156 LPIPDHSIVLP 166
            P       + 
Sbjct: 82  FPTFTVLTAMQ 92


>gi|268319111|ref|YP_003292767.1| ABC-type amino acid transport system, permease component
           [Lactobacillus johnsonii FI9785]
 gi|262397486|emb|CAX66500.1| ABC-type amino acid transport system, permease component
           [Lactobacillus johnsonii FI9785]
          Length = 212

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  LS    T+  +     FS +LG+  +L           K G+A+  +YI  F   
Sbjct: 8   HWSEFLSGFWNTILCSVIALFFSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  + +I      +   P +              F +  I L+ YT+AFIAE VR+G+ 
Sbjct: 63  PLLVITMIF-----YLIVPQIW--------FKVSGFAAGTIGLTLYTSAFIAETVRAGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQME A + G+T+ +A R V+LPQA++ +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 SVGDGQMEGARSNGMTYTQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   + + I   ++    YL L++ ++ +M  L  K+A
Sbjct: 170 YQADVIAFSSFETINTYVVVGLFYLVLTLPLSYYMRHLEKKLA 212



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++ +  L GF NT   +   +  + I+G       ++ NK    +  VY+E+FRNIP LV
Sbjct: 7   NHWSEFLSGFWNTILCSVIALFFSLILGVGFALLEVAPNKFGRAVAHVYIEIFRNIPLLV 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +    Y  V  +            G+ L     
Sbjct: 67  ITMIFYLIVPQIWFKVSGFAAGTIGLTLYTSAF 99


>gi|78066164|ref|YP_368933.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|206559973|ref|YP_002230737.1| binding-protein-dependent transport system inner membrane protein
           [Burkholderia cenocepacia J2315]
 gi|77966909|gb|ABB08289.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia sp. 383]
 gi|198036014|emb|CAR51907.1| binding-protein-dependent transport system inner membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 230

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  +VL++   R S                L   Y+S  L+ G P LV I +
Sbjct: 26  VLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 83

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 84  IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 133 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAAT 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    +Y  L  ++         +++L  + 
Sbjct: 193 YQPLPLYLAAAAVYWILCQILEWVQRWYEKRLSLPSRH 230


>gi|228957062|ref|ZP_04118836.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802622|gb|EEM49465.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 218

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFIAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|319776668|ref|YP_004139156.1| amino-acid ABC transporter permease [Haemophilus influenzae F3047]
 gi|329124186|ref|ZP_08252733.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus aegyptius ATCC 11116]
 gi|317451259|emb|CBY87493.1| probable amino-acid ABC transporter permease protein [Haemophilus
           influenzae F3047]
 gi|327467611|gb|EGF13109.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Haemophilus aegyptius ATCC 11116]
          Length = 238

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 13/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L  + L+ LP                   +    T+      F    ++ +++++  T
Sbjct: 1   MILLNNWLASLPFMSAERADYVISSFWPMLEAAILYTLPLAVISFFCGLLIAVIVAVICT 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
               +F  K  +++   YIS  +I G P LV I + +                       
Sbjct: 61  LPHPNFMTKLLQSIGRAYIS--IIRGTPMLVQIFIIFY-----------GLPEVGIKLEP 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  IA S    A+ AE VR+ +IA+P+GQ EA+ A+G+ +++A    ++PQA+R  +P
Sbjct: 108 FPTAIIAFSVNIGAYAAETVRASIIAIPKGQWEASYAIGMNYQQAFIRTIMPQALRISVP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L++ +++ +K++SLA  V  A+L  V   I  +  + I I      IY     ++++  
Sbjct: 168 SLSNTFISTVKDTSLASLVWIAELFRVAQNITAENYEFILIYSEAALIYWVFCFVLSIGQ 227

Query: 386 NRLNAKIAL 394
            RL  +++ 
Sbjct: 228 MRLEKRLSR 236


>gi|319782220|ref|YP_004141696.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168108|gb|ADV11646.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 219

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 16/232 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---TRLSRHFHEKTGKALPLLYIS 225
           M  +   +     T+    KI + + +LG VL+        L+R    K           
Sbjct: 1   MEWDWNFVWEIMPTLIQGVKITILATLLGSVLAAIVGLGIALARRSPNKALSRTVGWAAE 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G P LV +   + +  D  +L            P  ++  I L  +   + AE+ 
Sbjct: 61  F--IRGTPLLVQLYFIFYVLPDIGILL-----------PPLVAGVIGLGLHYGTYTAEVY 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  VPRGQ EAA A  L+  +    +++PQA+  +IP L + ++ + K + L  A+ 
Sbjct: 108 RAGIDNVPRGQWEAAKACNLSASQTWTHIIIPQAIPPMIPALANYFIAMFKETPLLSAIT 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L++   ++ N   + IE I +    +L +S+   + +  L  +    E+
Sbjct: 168 VLELMNQAKSVANTYYRYIEPITLVGAFFLVISLFSVVLLRWLERRYGKIER 219



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         ++ G   T      G + A I+G  +   R S NK ++       E  R
Sbjct: 4   DWNFVWEIMPTLIQGVKITILATLLGSVLAAIVGLGIALARRSPNKALSRTVGWAAEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
             P LV ++F++  +  +  
Sbjct: 64  GTPLLVQLYFIFYVLPDIGI 83


>gi|42782597|ref|NP_979844.1| amino acid ABC transproter permease protein [Bacillus cereus ATCC
           10987]
 gi|206975541|ref|ZP_03236454.1| amino acid ABC transproter permease protein [Bacillus cereus
           H3081.97]
 gi|217960925|ref|YP_002339493.1| amino acid ABC transproter permease protein [Bacillus cereus AH187]
 gi|222096983|ref|YP_002531040.1| amino acid abc transproter, permease protein [Bacillus cereus Q1]
 gi|229140135|ref|ZP_04268694.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
 gi|42738523|gb|AAS42452.1| amino acid ABC transproter, permease protein VC0009 [Bacillus
           cereus ATCC 10987]
 gi|206746443|gb|EDZ57837.1| amino acid ABC transproter permease protein [Bacillus cereus
           H3081.97]
 gi|217064180|gb|ACJ78430.1| amino acid ABC transproter permease protein [Bacillus cereus AH187]
 gi|221241041|gb|ACM13751.1| amino acid ABC transproter, permease protein [Bacillus cereus Q1]
 gi|228643347|gb|EEK99619.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
          Length = 222

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +             +     I V S ++  V+ +    ++++   K   ++  +YI
Sbjct: 1   MKFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKN-KTKFLYSIARVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV +   + L+F  P +         TV     +  I LS   AA+++EI
Sbjct: 60  SFF--RGTPLLVQL---FVLYFGLPQI-----FPTFTVLTAMQATLIGLSLNNAAYLSEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+ A+
Sbjct: 110 IRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G A++++    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 170 GVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    MI + +IG  +     +  K +  I RVY+  FR  P LV +F LY  +  +
Sbjct: 22  TLGITVVSMIISFVIGIGLAIITKNKTKFLYSIARVYISFFRGTPLLVQLFVLYFGLPQI 81

Query: 156 LPIPDHSIVLP 166
            P       + 
Sbjct: 82  FPTFTVLTAMQ 92


>gi|325273126|ref|ZP_08139423.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324101731|gb|EGB99280.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 229

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 13/226 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L           ++   + V G++L++    ++R       +A+P  YI  F   G 
Sbjct: 7   FKWLPRLAEGAVLTLELVAIAVVAGLILAIPLG-IARSSRHWYVRAVPFSYIFFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF+ +  S + P     F    + ++ +TAA+IAEI+R  
Sbjct: 64  PLLVQLFLVYY------GLAQFDAVRSSALWPYLRDPFWCTVLTMTLHTAAYIAEILRGA 117

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P+G++EAA ALG++  K    ++LP+A R  +P  +++ + +LK S+LA  V   +
Sbjct: 118 LQSIPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLE 177

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  +  TII +T   +EI       YL++S ++      L   + +
Sbjct: 178 LTGMARTIIARTYLPVEIFFAAGVFYLAISFLLVQGFKLLERWLRV 223



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L    ++   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAEGAVLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 69  LFLVYYGLAQFD 80


>gi|228906388|ref|ZP_04070272.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
 gi|228853300|gb|EEM98073.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
          Length = 218

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 120/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|167842072|ref|ZP_02468756.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia thailandensis MSMB43]
          Length = 297

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 104/205 (50%), Gaps = 5/205 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V +  LGIVL +  T + R        A+   YI  F   G P ++ + L + L  
Sbjct: 82  IVMTVLAMTLGIVLGVV-TAVMRLSSNPVLGAIAQGYIWLF--RGTPVILQLLLWFNLAL 138

Query: 247 DKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P L            V   F++  + L     A+ +E+VR+GL++V  GQ EAA ++G
Sbjct: 139 VFPTLGIPGIAEFRTVDVMTPFLAAVLGLGINQGAYTSEVVRAGLLSVDTGQYEAAKSIG 198

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +A R ++LPQAMR I+PP+ ++ + ++K +SLA  V +A+++     I     + I
Sbjct: 199 MARLQALRRIILPQAMRMIVPPIGNELIGMVKLTSLASVVQYAEMLHNAQNIYYANARVI 258

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
           E++++    YL++  +++    R+ 
Sbjct: 259 ELLIVAGIWYLAVVTVLSFAQARVE 283



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A +IL G  NT  +    M    ++G +    RLS+N ++  I + Y+ +FR  P ++ +
Sbjct: 71  ARSILTGLGNTIVMTVLAMTLGIVLGVVTAVMRLSSNPVLGAIAQGYIWLFRGTPVILQL 130

Query: 146 FFLYKSVL 153
              +   L
Sbjct: 131 LLWFNLAL 138


>gi|295096441|emb|CBK85531.1| L-arginine ABC transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 238

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPT 234
               + V + ++G+VL++F                       + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIIGLVLAMFFAVWESVKWRPVAWLGSALVTVLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   +A+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFAQIPVQMQIENFDVSP-FLCGVIALSLLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 QGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYVLKRIDLRATRFERR 236


>gi|227548107|ref|ZP_03978156.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079833|gb|EEI17796.1| ABC superfamily ATP binding cassette transporter [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 309

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            I       L+V  I   +    +G     R L    + +       I + + + G+V  
Sbjct: 21  WILAAIIIALAVWFIIGAARNDAYGWDTYFRYLFDTRIAIAALHTLAITILAMLFGVVGG 80

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
           +    + R       K +   ++  ++  G P  V +     +   +D   LG       
Sbjct: 81  VLL-AVMRMSPNPVFKTVA--WVFLWIFRGTPVYVQLIFWGLIGSIYDTFNLGVAEIPLE 137

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
              S  F+   + L+   AA++AEIVRSG+ +VP GQ+EA+ ALG++  +  +  +LPQA
Sbjct: 138 PFTSSAFLLAVVGLALNEAAYMAEIVRSGVSSVPEGQIEASKALGMSWSQTMKRTVLPQA 197

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  +++++LLK SSL VAV ++ +L      I     + + ++L+    YL+++
Sbjct: 198 MRIIIPPTGNEFISLLKTSSLVVAVPYSLELYGRSMDIAAALFEPVPMLLVAATWYLAIT 257

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +  + L         +
Sbjct: 258 SILMVGQHYLEKYFDRGATR 277



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 83  SSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +Y   +      +  ++T  +    M+   + G L+   R+S N +   +  V++ +FR
Sbjct: 47  DTYFRYLFDTRIAIAALHTLAITILAMLFGVVGGVLLAVMRMSPNPVFKTVAWVFLWIFR 106

Query: 138 NIPPLVVIFFLYKSV 152
             P  V + F     
Sbjct: 107 GTPVYVQLIFWGLIG 121


>gi|209547562|ref|YP_002279480.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538806|gb|ACI58740.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 592

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +     +   + S    P     +    F     L     T+       +   +LG  L+
Sbjct: 41  IFAAVVIIAVLYSTFTNPRWGWGVFAEWFFAEPVLVGLGRTLLLTVLAAISGSILGTALA 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGS 260
           L     S      +   + LL     ++  L    L  L   +    P     F      
Sbjct: 101 LARVSRSPLLSGLSWGYIWLLRSIPVIVLLLILNNLGYLYETIKIGIPFTDTVFIDYPTV 160

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F + ++ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+    ++LPQAM
Sbjct: 161 QLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRRQAFRIVLPQAM 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           RSI+P   ++ + L K++S+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 221 RSILPTGFNELIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTV 280

Query: 381 IALFMNRLNAKIALKEKK 398
           +++  + +    +    +
Sbjct: 281 LSIAQHYIERYFSKGAVR 298



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 20/210 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-PLVVIFFL 148
           LVG   T  L     I  +I+GT +   R+S + L++ +   Y+ + R+IP  ++++   
Sbjct: 75  LVGLGRTLLLTVLAAISGSILGTALALARVSRSPLLSGLSWGYIWLLRSIPVIVLLLILN 134

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--------- 199
               L               +      L  P         +   +F   IV         
Sbjct: 135 NLGYLYETIKIGIPFTDTVFIDYPTVQLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDH 194

Query: 200 ------LSLFATRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                  +L   R  + F     +A    LP  +     +    ++V +    +L +   
Sbjct: 195 GQLEAAAALGLPRRRQAFRIVLPQAMRSILPTGFNELIGLAKSTSMVYVLALPELFYTVQ 254

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           V+ + N      +    +   I ++  + A
Sbjct: 255 VIYRRNLEVIPLLMVATVWYLIIMTVLSIA 284


>gi|156934640|ref|YP_001438556.1| arginine transporter permease subunit ArtQ [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156532894|gb|ABU77720.1| hypothetical protein ESA_02474 [Cronobacter sakazakii ATCC BAA-894]
          Length = 238

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG----------KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++    L        G          + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALGLGLVLAMLFAVLESAKWRPVGWLATALVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + +      +     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTIPLGFTSIPVQVQIDNFDVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 HGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIDLRATRFERR 236


>gi|323697542|ref|ZP_08109454.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457474|gb|EGB13339.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 238

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 120/251 (47%), Gaps = 18/251 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +    S L    +        F           ++         +F LG+   L   R+S
Sbjct: 3   WDIAFSNLDYFLYGTTNFDWHFPFIHNPEGLVASVILAIFGIFGAFWLGLAAGLM--RMS 60

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +  K             +I G+P L+LI   Y L    PV+   N        P F +
Sbjct: 61  RRWWIKIP-----AVCYIEVIRGMPLLLLIFWFYYL---APVITGQNL-------PAFST 105

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +    +T A++ EIVR+G+ A+P+GQMEAA + GL+H +A +LV+LPQA+R++IP   
Sbjct: 106 TMVCFMIFTGAYVGEIVRAGVKALPKGQMEAARSTGLSHVQAMQLVILPQALRNMIPSFV 165

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +Q+++L K++SLA  +G  +L   G  + N+ T  + EI +    +Y  +  ++  +  R
Sbjct: 166 NQFVSLTKDTSLAAILGVIELTRTGIQVDNRETVASFEIWITIACLYFLICYILTSYSRR 225

Query: 388 LNAKIALKEKK 398
           L A+++  + +
Sbjct: 226 LEAQLSRYQAR 236



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V +  LA  G+  A  +G   G  R+S    +      Y+EV R +P L++IF+ Y  
Sbjct: 32  GLVASVILAIFGIFGAFWLGLAAGLMRMSRRWWIKIPAVCYIEVIRGMPLLLLIFWFYYL 91

Query: 152 VLSVLPIPDHSIVLPFGMFL 171
              +      +       F+
Sbjct: 92  APVITGQNLPAFSTTMVCFM 111


>gi|209515404|ref|ZP_03264270.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209504124|gb|EEA04114.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 218

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 18/234 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
                      L    +++       + S VLG+  +L           K  +   ++  
Sbjct: 3   WQDIADFVPILLQGAVMSIIITLGCLLLSTVLGLTWALL----------KMSRYPHVVRG 52

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            + +I  +  L +I L + ++F  P +                +  I L    + +IAEI
Sbjct: 53  VSAMINVVRGLPMIVLLFYIYFVLPDIH--------IQVTALQASIIGLGFGYSTYIAEI 104

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ AV  GQ EAA ++G+   K    V+LPQA++  +PP ++  + +LK+SSLA  +
Sbjct: 105 FRAGIEAVDPGQYEAAQSIGMGRVKTMVRVILPQAIKVALPPYSNTLVMMLKDSSLASTI 164

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             A++   G  I + T Q + +  +    YL++S+ +      L  +      +
Sbjct: 165 TVAEMTREGQLIASSTFQNLTVYTLVALGYLAMSLPLMSMTRNLERRFGRHRAR 218


>gi|317133175|ref|YP_004092489.1| polar amino acid ABC transporter, inner membrane subunit
           [Ethanoligenens harbinense YUAN-3]
 gi|315471154|gb|ADU27758.1| polar amino acid ABC transporter, inner membrane subunit
           [Ethanoligenens harbinense YUAN-3]
          Length = 228

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 12/216 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ--- 243
             + VFS  + I +      L R    K  K L + Y+    I G P ++ + + +    
Sbjct: 21  ILLSVFSMCISI-MLGILLALLRLSKLKIPKMLAVSYVEF--IRGTPLMIQLFIIFYGLP 77

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +    P L  F+     T    F+S  IA++  ++A++ EI RSG+ +V  GQ+EA+ +
Sbjct: 78  MIGISIPSLTFFD-----TDISRFISGMIAMALNSSAYVCEIFRSGIQSVDDGQVEASRS 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG  +    R ++LPQA+R+I+P L ++ + ++K SS+   +G  +L+     + + T +
Sbjct: 133 LGFNYSSTMRFIVLPQALRNILPALGNELVTVIKESSVISVIGVQELMYNTTIVRSTTYK 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   ++I   IY  ++  ++  + +    ++    +
Sbjct: 193 SFSPLIITALIYFVITFTLSKLLGKFEKHMSRSNAR 228



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y T  L G  N   L+   M  + ++G L+   RLS  K+   +   YVE  R  P +
Sbjct: 7   STYYTYFLTGARNAILLSVFSMCISIMLGILLALLRLSKLKIPKMLAVSYVEFIRGTPLM 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLP 166
           + +F ++  +  +           
Sbjct: 67  IQLFIIFYGLPMIGISIPSLTFFD 90


>gi|228977335|ref|ZP_04137730.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228782312|gb|EEM30495.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
          Length = 206

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++ +  +  + 
Sbjct: 1   MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWVGSAFVEFVR 50

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 51  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 102

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 103 KGQMEAARSSGLTYTQAMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 162

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 163 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 202



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+   +VE  RNIP +++ F  
Sbjct: 2   YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWVGSAFVEFVRNIPLVLIAFIF 61

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 62  YFALP 66


>gi|56961809|ref|YP_173531.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908043|dbj|BAD62570.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 212

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 13/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++   L F    +     I +    LG ++      L R       +A+  +++    I 
Sbjct: 1   MDFGALPFLWEGLKYTVLITLVGVFLGSIVG-SIFGLMRLSRIGFVRAIAAIFVEA--IR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L  I   + +HF  P L    F           +    ++  + A+IAEIVR G+ 
Sbjct: 58  GTPLLAQI---FFIHFGIPGLLDLRF-------DPLYTGIFVIAINSGAYIAEIVRGGVQ 107

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQMEA  +LGLT  +  R ++ PQA++ +IPP  +Q++  LK++SL   +  ADL+
Sbjct: 108 SIDKGQMEAGRSLGLTGSQTMRYIIWPQAIKVMIPPFGNQFIISLKDTSLLSTIAVADLM 167

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               T    +    +  L+    YL+++I  +L +     ++  
Sbjct: 168 YQSRTYTGLSASYFDTYLLVCLFYLAITIPASLLLRYTERRLER 211



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  +   G+   +I+G++ G  RLS    V  I  ++VE  R  P L  IFF+
Sbjct: 9   LWEGLKYTVLITLVGVFLGSIVGSIFGLMRLSRIGFVRAIAAIFVEAIRGTPLLAQIFFI 68

Query: 149 YKSVL 153
           +  + 
Sbjct: 69  HFGIP 73


>gi|116627490|ref|YP_820109.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116100767|gb|ABJ65913.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 235

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 110/233 (47%), Gaps = 5/233 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
                F++    S+    +     I V     G +L +    L++    K  + L  LY+
Sbjct: 8   YLDEFFISTTVWSYFNYGVLVTIMISVCVVFFGTILGVLV-SLAKRSGIKPLEWLVSLYV 66

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P +V I + + L        QF  +         +   I LS  + A+I+E 
Sbjct: 67  WVF--RGTPMVVQIMIAFNLIHMNLPTVQFGILNLDL--SRIVPGIIVLSLNSGAYISES 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++P+GQ+EAA +LG+      R V+LPQA+++I+P L ++++ ++K+SSL   +
Sbjct: 123 VRAGIESIPKGQIEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQTI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +L +   T+   T   +  +L   F YL ++  +   + ++  ++    K
Sbjct: 183 GVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGKGRK 235



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 38/88 (43%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + +  +   ++  +    G + T  ++   +   TI+G LV   + S  K + W+  +YV
Sbjct: 7   EYLDEFFISTTVWSYFNYGVLVTIMISVCVVFFGTILGVLVSLAKRSGIKPLEWLVSLYV 66

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
            VFR  P +V I   +  +   LP    
Sbjct: 67  WVFRGTPMVVQIMIAFNLIHMNLPTVQF 94


>gi|303250830|ref|ZP_07337024.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307253267|ref|ZP_07535141.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650343|gb|EFL80505.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306859254|gb|EFM91293.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 238

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +++L  +P  D + V            +   +++      F+    + + ++L     
Sbjct: 1   MLENLLLQIPFMDEARVKLVMDAFLPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +   A+  +YIS  +I G P LV I++ +                         
Sbjct: 61  VNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY-----------GLPAIGVYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R  +PPL
Sbjct: 108 AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++ L   +
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAK 227

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 228 LERRFNR 234


>gi|218234515|ref|YP_002365437.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|229148979|ref|ZP_04277224.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1550]
 gi|218162472|gb|ACK62464.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|228634519|gb|EEK91103.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1550]
          Length = 218

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 118/220 (53%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++   ++  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWLGAAIVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++    L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTATLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAVKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+    VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWLGAAIVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|199597030|ref|ZP_03210463.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|199592163|gb|EDZ00237.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
          Length = 237

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 5/210 (2%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      F    ++ +V +L    + +    +  K + + Y+  F     P LV + +
Sbjct: 19  YTIPIALVSFAIGLIIALVTALTRISVRKGILIRIAKGIAVFYVWLF--RSTPLLVQLFI 76

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +   F  P L                +  I  S  T A+ AE  R+ L+++  GQ EAA
Sbjct: 77  VF---FGLPSLIIPGIFPHGIKLDPAAAGIITFSLNTGAYCAETTRASLLSIDSGQWEAA 133

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+GL  R   R +++PQA+R+ IPPL++ +++L+K++SLA ++   ++  V   I  + 
Sbjct: 134 YAIGLPRRLVLREIIIPQALRTAIPPLSNSFISLIKDTSLAASITIVEMFQVSQQIAAEN 193

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            Q + +  I   +Y  +   +A     L  
Sbjct: 194 YQPLLMYSIVALLYAIVCTFLAWGQRYLEK 223


>gi|150377557|ref|YP_001314152.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150032104|gb|ABR64219.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 307

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/242 (23%), Positives = 110/242 (45%), Gaps = 15/242 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +    +      +   LS   +T+       V    +G+VL++     SR F        
Sbjct: 47  NMQWSVVAEYMFSPAILSGLGMTLLLTFLAMVLGLAIGVVLAIMRLSASRVFQV------ 100

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG--------STVSPEFMSLYI 271
            + +   +   G+P LV +   Y L    P +      GG        + +   F +  +
Sbjct: 101 -VSWGWIWFFRGVPPLVQMIFWYNLALLLPEISIGIPFGGPKLLSWNTNQLITPFSAAIM 159

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+   +A+ AE++R+G+ AV  GQ EAA  LG+   +  R ++LPQA+R +IPP+ +  
Sbjct: 160 GLAFTESAYAAEMIRAGIQAVNAGQTEAAATLGMKRGQTLRRIVLPQALRIVIPPIGNDT 219

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++LK +SL   +   DL+     +  +T Q + ++L+    YL L+ ++ +  + +  +
Sbjct: 220 ISMLKFTSLVSVLALPDLLYSAQMVYARTYQTVPLLLVATIWYLVLTTVLTVVEHAVEHR 279

Query: 392 IA 393
           + 
Sbjct: 280 LK 281



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 35/69 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           AIL G   T  L F  M+    IG ++   RLSA+++   +   ++  FR +PPLV + F
Sbjct: 61  AILSGLGMTLLLTFLAMVLGLAIGVVLAIMRLSASRVFQVVSWGWIWFFRGVPPLVQMIF 120

Query: 148 LYKSVLSVL 156
            Y   L + 
Sbjct: 121 WYNLALLLP 129


>gi|2507497|sp|P45023|Y1079_HAEIN RecName: Full=Probable amino-acid ABC transporter permease protein
           HI_0179
 gi|1574633|gb|AAC22735.1| amino acid ABC transporter, permease protein [Haemophilus
           influenzae Rd KW20]
          Length = 210

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 13/214 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      F    ++ +++++  T  S +   K  +AL  +YIS  +I G P LV I +
Sbjct: 8   YTLPLAVISFFCGLLIAVIVAVIRTLPSPNLPLKLLQALCRVYIS--IIRGTPMLVQIFI 65

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +   +  P +       G T+ P F +  IA S    A+ AE VR+ +IA+P+GQ EA+
Sbjct: 66  IF---YGLPEV-------GITLEP-FPTAIIAFSINIGAYAAETVRASIIAIPKGQWEAS 114

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+G+ +R+A    ++PQA+R  +P L++ +++ +K++SLA  V   +L  V   I    
Sbjct: 115 YAIGMNYRQAFIRTIMPQALRISVPSLSNTFISTVKDTSLASLVLVTELFRVAQNITAAN 174

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + I I      IY     +++   +RL  +++ 
Sbjct: 175 YEFILIYSEAALIYWIFCFVLSFLQDRLEIRLSR 208


>gi|311106238|ref|YP_003979091.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 9 [Achromobacter
           xylosoxidans A8]
 gi|310760927|gb|ADP16376.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 9
           [Achromobacter xylosoxidans A8]
          Length = 217

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +F  +  L + L L    L R    +    L   YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLTLFFITLALAVPLGLVL-ALVRISKWRLASNLVNGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ E +  LG
Sbjct: 74  LPFVPVI--------GIRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   D++     I+ +     
Sbjct: 126 MTYLQTLRRIVLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              L+    YL +++++  F   +  + A  ++
Sbjct: 185 TPFLVAAAFYLIMTLILTWFFQHMEKRYAKYDQ 217



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L F  +  A  +G ++   R+S  +L + +   Y+ + R  P ++ + F+
Sbjct: 11  LAQGAKVTLTLFFITLALAVPLGLVLALVRISKWRLASNLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGIRLPDFP 88


>gi|239826928|ref|YP_002949552.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. WCH70]
 gi|239807221|gb|ACS24286.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. WCH70]
          Length = 217

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 10/224 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L              + + VL ++ SL    +   F     +  PL +I T  +  +
Sbjct: 4   YSILLEHWDMYLQGFANTLKASVLALIGSLVIGIIIAIFRIAPIR--PLNWIGTVYVEFI 61

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             + LI + +      P +              F +  + L  YTAAFIAE++RSG++AV
Sbjct: 62  RNIPLILIVFVFFVGFPAI--------GIRFDSFTAGTLGLMVYTAAFIAEVIRSGILAV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQMEAA + GLT+ +  R ++LPQA++ +IPPL +Q++NL+KNSS+   +   DL+  
Sbjct: 114 PKGQMEAARSSGLTYLQTMRYIILPQAIKIVIPPLGNQFINLVKNSSVLGVIAGLDLMYF 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  I ++T    ++ +     YL L+I ++L +  L  ++A   
Sbjct: 174 GDLISSETFVTFDVYIFVALFYLVLTIPLSLGVGYLEQRLAKSR 217



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    L GF NT   +   +I + +IG ++   R++  + + WI  VYVE  RNIP +++
Sbjct: 10  HWDMYLQGFANTLKASVLALIGSLVIGIIIAIFRIAPIRPLNWIGTVYVEFIRNIPLILI 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +F  +    ++    D       G+ +         +     A
Sbjct: 70  VFVFFVGFPAIGIRFDSFTAGTLGLMVYTAAFIAEVIRSGILA 112


>gi|118587044|ref|ZP_01544475.1| ABC-type amino acid transport system, permease [Oenococcus oeni
           ATCC BAA-1163]
 gi|290890987|ref|ZP_06554051.1| hypothetical protein AWRIB429_1441 [Oenococcus oeni AWRIB429]
 gi|118432565|gb|EAV39300.1| ABC-type amino acid transport system, permease [Oenococcus oeni
           ATCC BAA-1163]
 gi|290479386|gb|EFD88046.1| hypothetical protein AWRIB429_1441 [Oenococcus oeni AWRIB429]
          Length = 231

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               I + + VLG ++ LF   +     ++    +   Y+   ++ G P +V +   Y  
Sbjct: 23  VTLLISICAVVLGSIIGLFI-AIMHMSKKRVVNVIATTYVE--ILRGTPLIVQLMFVYYA 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +      +            P   +  IA++  ++A+++E +R+G  ++ +GQ EAA +L
Sbjct: 80  VPLILQAILSNFGSSIEINIPTIPAGIIAVAINSSAYVSEAIRAGFNSIDKGQTEAARSL 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL  +   R V++PQA+++I P L ++++ L+K SS+ + +G  D++     I   T + 
Sbjct: 140 GLPKKLTMRYVIIPQALKNIWPALGNEFVALIKESSIVLVIGTPDIMYQINNIRAVTFEP 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  +++   IY  L+  +   M     K+
Sbjct: 200 VAPLILSAVIYFVLTFGLTRIMKHFEGKM 228



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 40/83 (48%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q I+   +   + + ++ G   T  ++   ++  +IIG  +    +S  ++V  I   Y
Sbjct: 1   MQSIILDVNLWKFRSELISGIEVTLLISICAVVLGSIIGLFIAIMHMSKKRVVNVIATTY 60

Query: 133 VEVFRNIPPLVVIFFLYKSVLSV 155
           VE+ R  P +V + F+Y +V  +
Sbjct: 61  VEILRGTPLIVQLMFVYYAVPLI 83


>gi|93006751|ref|YP_581188.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92394429|gb|ABE75704.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 245

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 13/255 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L  I  +   +L++LP                        ++      F     + + +
Sbjct: 1   MLASITSVLADLLALLPFMSPDRAQIVISSFWPMLKGGIYYSIPLALISFAIGMAIALTV 60

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +L        +  +    L  +Y+S   I G P LV + + +                  
Sbjct: 61  ALIRIVPRAGWVHEIVYRLARIYVSA--IRGTPMLVQLFIIFY-----------GLPSVG 107

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F S  IA S    A+ +E VR+ ++++P+GQ EA   +GLT+ +  R V+LPQA+
Sbjct: 108 VKLDPFPSAIIAFSLNIGAYASETVRASILSIPKGQWEAGSTVGLTYLQTFRHVILPQAL 167

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +PPL++ +++L+K++SLA  V   +L      I  +  + + + +    IY  + + 
Sbjct: 168 RVSVPPLSNTFISLVKDTSLASLVLVTELFKQAQIITARNYEFMLVYIEAAVIYWGICLF 227

Query: 381 IALFMNRLNAKIALK 395
           +     RL  ++   
Sbjct: 228 LTFIQGRLETRLDRY 242


>gi|296113907|ref|YP_003627845.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis RH4]
 gi|295921601|gb|ADG61952.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis RH4]
 gi|326561457|gb|EGE11807.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 46P47B1]
 gi|326562228|gb|EGE12556.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis 7169]
 gi|326567182|gb|EGE17304.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis BC1]
 gi|326572018|gb|EGE22020.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis BC8]
 gi|326576286|gb|EGE26201.1| octopine transport system permease protein OccM [Moraxella
           catarrhalis CO72]
          Length = 241

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 4/233 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +                 T  ++ V S  LG+V  +      R       +A+P  YI
Sbjct: 1   MNWNWQAIINYFPDLLAASVTTIELVVLSCALGLVFGVILGLW-RLSPVLWLRAIPATYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV I L Y        L + +F+     S  +    IA +  T+A+I EI
Sbjct: 60  FFF--RGTPLLVQIFLIYYGLGQFTALKE-SFLWDPIFSQAYWCAIIAFTLNTSAYIGEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  ++AVP G++EAA A+G++ ++    V+LP+A   +IP  +++ + +LK S+LA ++
Sbjct: 117 VRGAVMAVPTGELEAADAIGMSKQQKLHRVILPRAFGIMIPAYSNEVIFMLKGSALAASI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L      II+ T   +E+      IYL +S +      +   ++   ++
Sbjct: 177 TVVELTHKARDIISITYLHLEMFFAAGMIYLVISWVFLFIFRQFEHRVNRHKR 229



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L   V T  L         + G ++G  RLS    +  I   Y+  FR  P LV
Sbjct: 10  NYFPDLLAASVTTIELVVLSCALGLVFGVILGLWRLSPVLWLRAIPATYIFFFRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            IF +Y  +     + +  +  P         +   TL         V   V+ +
Sbjct: 70  QIFLIYYGLGQFTALKESFLWDPIFSQAYWCAIIAFTLNTSAYIGEIVRGAVMAV 124


>gi|262274651|ref|ZP_06052462.1| arginine/ornithine ABC transporter permease protein AotQ [Grimontia
           hollisae CIP 101886]
 gi|262221214|gb|EEY72528.1| arginine/ornithine ABC transporter permease protein AotQ [Grimontia
           hollisae CIP 101886]
          Length = 233

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 8/219 (3%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            +      ++ V S V+ ++L L  T ++R    +  + +  LY  + ++ G+P LVL+ 
Sbjct: 12  FMGAILTVELAVLSAVIAVLLGLV-TAMARLSKNRVARGVATLY--STVVRGVPDLVLML 68

Query: 240 LKYQLHFDKP-----VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L +             L +   I       EF +    +     A++AE  R   +AV R
Sbjct: 69  LIFFGAQIMMNNISDWLYEHYEIDVFFNIDEFTAGVSTIGFIFGAYMAETFRGAFLAVDR 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EA  A G++     R V+ PQ MR  +P + + +L L+K ++L   +G AD+  +  
Sbjct: 129 GQLEAGTAYGMSPWMIFRRVMFPQMMRHALPGIGNNWLVLVKTTALVSVIGLADMTRLAK 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  +  +  +    +YL ++ +  L + RL  K +
Sbjct: 189 EAAGAVNEPFKFFIPVAIVYLLITSVSELGLKRLERKFS 227



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 46/117 (39%), Gaps = 7/117 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I +G + T  LA    + A ++G +    RLS N++   +  +Y  V R +P LV+
Sbjct: 7   YGPSIFMGAILTVELAVLSAVIAVLLGLVTAMARLSKNRVARGVATLYSTVVRGVPDLVL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +  ++     ++                +  +       +  A +    F+ G  ++
Sbjct: 67  MLLIFFGAQIMMNNISDW-------LYEHYEIDVFFNIDEFTAGVSTIGFIFGAYMA 116


>gi|146309286|ref|YP_001189751.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145577487|gb|ABP87019.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 256

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 5/220 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L   +       ++   + V G++L+L    ++R       +ALP  YI  F   G P 
Sbjct: 36  WLPRLSQGALLTLELVAIAVVAGLILAL-PMGIARASRHWYVRALPYGYIFFF--RGTPL 92

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y        + Q        +   +    I ++ +TAA+IAEI+R  + AVP 
Sbjct: 93  LVQLFLVYYGLAQFDAVRQGPL--WPYLRDPYWCAIITMTLHTAAYIAEILRGAIQAVPP 150

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G++EAA ALG++  +A   ++LP+A R  +P  +++ + +LK S+LA  V   +L  +  
Sbjct: 151 GEVEAAHALGMSRAQAMLYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMAR 210

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           TII +T   +EI       YL+++ ++      L   + +
Sbjct: 211 TIIARTYLPVEIFFAAGLFYLAIAFVLVRAFRLLERWLRV 250



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 29/72 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G + T  L    ++   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 36  WLPRLSQGALLTLELVAIAVVAGLILALPMGIARASRHWYVRALPYGYIFFFRGTPLLVQ 95

Query: 145 IFFLYKSVLSVL 156
           +F +Y  +    
Sbjct: 96  LFLVYYGLAQFD 107


>gi|172057718|ref|YP_001814178.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
 gi|171990239|gb|ACB61161.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
          Length = 214

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
             F    +     IF+ + ++G ++ L    L R    K    + ++YI   +I G P +
Sbjct: 8   FPFFLEGLQITLYIFIIAVIVGFLIGLIV-ALMRLSPLKILNGIAIVYID--VIRGTPFI 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y   F    L   +            +  + ++    A+ AEI+R+G+ ++ +G
Sbjct: 65  VQLFFIY---FGLNSLEWLS-------MDRMYAGILTVAINAGAYFAEIIRAGIQSIDKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LG+T R+    ++LPQA R ++P +T+Q +  LK++SL   +G ADL   G  
Sbjct: 115 QTEAARSLGMTGRQTMTQIVLPQAFRRMLPTITNQSIISLKDTSLLSIIGIADLTQQGQV 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               T +   +  +   +Y  +  +++L    L  +  L+
Sbjct: 175 QQATTFEPFIVWTVVGLMYFVVIYLLSLLGKFLERRFTLR 214



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T ++    +I   +IG +V   RLS  K++  I  VY++V R  P +V +FF+
Sbjct: 11  FLEGLQITLYIFIIAVIVGFLIGLIVALMRLSPLKILNGIAIVYIDVIRGTPFIVQLFFI 70

Query: 149 YKSV 152
           Y  +
Sbjct: 71  YFGL 74


>gi|152974369|ref|YP_001373886.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152023121|gb|ABS20891.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 233

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/219 (29%), Positives = 119/219 (54%), Gaps = 18/219 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+ ++    + SF+LG+++++      R           L +I T  +  +  
Sbjct: 29  YLEGFKYTLLSSVIALIGSFLLGVIIAVMRITPIR----------ALNWIGTAYVEFVRN 78

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + ++ + +  +F  PV+              F++   AL+ YTA+FIAE +R+G+++V +
Sbjct: 79  IPIVLIAFAFYFAFPVV--------GVTLSGFVAGTAALTIYTASFIAEAIRAGILSVAK 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA + GLT+ +A   V+LPQA++ +IPPL +Q+LNL+KNSS+   +  ADL+  G 
Sbjct: 131 GQMEAARSSGLTYVQAMYYVVLPQAIKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGD 190

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I  +T    ++ +     YL L++ +++ +  L  ++A
Sbjct: 191 LISTRTFVTFDVYIFVGMFYLLLTVPLSMLVRYLEKRLA 229



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 38/79 (48%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  ++  ++     L GF  T   +   +I + ++G ++   R++  + + WI   YVE
Sbjct: 15  SLPDFSILTNNIDLYLEGFKYTLLSSVIALIGSFLLGVIIAVMRITPIRALNWIGTAYVE 74

Query: 135 VFRNIPPLVVIFFLYKSVL 153
             RNIP +++ F  Y +  
Sbjct: 75  FVRNIPIVLIAFAFYFAFP 93


>gi|282897629|ref|ZP_06305629.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9]
 gi|281197552|gb|EFA72448.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9]
          Length = 313

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 1/186 (0%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S+     + R   I++Q++  L+   I     NN  +N+ +  +S G  FL ++A F+I 
Sbjct: 4   SQPPIWRNYRFWQIAIQVVAILMALGIVNILWNNANHNLRQLGISFGWDFLGQQASFDIG 63

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + +V Y +  SY  A+ VG VN+  +A  G++ AT++G   G GRLS N LV  I  VYV
Sbjct: 64  ESLVKYDATESYGRALAVGLVNSLRVATLGILLATVVGITAGIGRLSDNWLVRNISLVYV 123

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVF 192
           E+FRN P L+ + F Y  V   LP P++ I L    +L+  G+  PTLT    N      
Sbjct: 124 EIFRNTPLLLQLLFWYFGVFLSLPKPENKISLFGLGYLSQNGIDLPTLTYQGVNLTPEFC 183

Query: 193 SFVLGI 198
           + +LG+
Sbjct: 184 TLLLGL 189



 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 84/226 (37%), Positives = 131/226 (57%), Gaps = 20/226 (8%)

Query: 188 KIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPT------- 234
              + + V+GI   +      +  R     + +  +  PLL    F  FG+         
Sbjct: 92  LGILLATVVGITAGIGRLSDNWLVRNISLVYVEIFRNTPLLLQLLFWYFGVFLSLPKPEN 151

Query: 235 -LVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            + L  L Y  Q   D P L       G  ++PEF +L + L+ YT AF+AEIVR+G+ +
Sbjct: 152 KISLFGLGYLSQNGIDLPTLTY----QGVNLTPEFCTLLLGLTFYTGAFVAEIVRAGIKS 207

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ +A ++LGL      RL++ PQA++ I+PPLTSQYLNL+KNSSLA+A+G+ D+  
Sbjct: 208 VSQGQWDAGLSLGLRSGLLMRLIIFPQALKLIVPPLTSQYLNLMKNSSLAIAIGYPDMYF 267

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V  T  NQTG+A+E++++ M  YL+LS+ I++ MN +N  + +KE+
Sbjct: 268 VASTTFNQTGKAVEVMVLLMITYLTLSLTISIVMNLINRTVQIKER 313


>gi|256830361|ref|YP_003159089.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256579537|gb|ACU90673.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 271

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 15/272 (5%)

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           +    +   C     V      ++ +F++       +        +P  + L +      
Sbjct: 3   ARLFSLRCRCGTLCSVVAYALTMLCVFWVVLRGAESMGYNWQWYRVPRFILLPDGSPGPL 62

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                    +    FV   VL+L  T L R      G+A    Y+   LI   P LV I 
Sbjct: 63  LQGAGITLLVSALGFVGAAVLAL-GTALLRLSGSVVGQAAARCYLE--LIRNTPLLVQIF 119

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             Y +            +  +       S  +AL+ +  A+ +EI+R+G++A+PRGQ E 
Sbjct: 120 FVYFV------------LAPAVGLGRLPSAVLALALFEGAYASEIIRAGILAIPRGQWEG 167

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A++LG++       V+LPQA+R+I+PPLTSQ ++L+K+S+L   +   DL   G  II +
Sbjct: 168 ALSLGMSRASVYMQVILPQALRNILPPLTSQAVSLIKDSALVSTIAIYDLTMHGQAIIAE 227

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T  + EI  +   IYL  ++ ++     L  +
Sbjct: 228 TFLSFEIWSVVAAIYLVFTVTLSSLARLLEKR 259



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++  G + A ++       RLS + +     R Y+E+ RN P LV IFF+
Sbjct: 62  LLQGAGITLLVSALGFVGAAVLALGTALLRLSGSVVGQAAARCYLELIRNTPLLVQIFFV 121

Query: 149 YKSV 152
           Y  +
Sbjct: 122 YFVL 125


>gi|257463486|ref|ZP_05627880.1| amino acid ABC transporter permease [Fusobacterium sp. D12]
 gi|317061044|ref|ZP_07925529.1| amino acid ABC transporter permease [Fusobacterium sp. D12]
 gi|313686720|gb|EFS23555.1| amino acid ABC transporter permease [Fusobacterium sp. D12]
          Length = 225

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 99/188 (52%), Gaps = 12/188 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    K    + LLYI   ++ G P +V + +          L    F+G    +P  + 
Sbjct: 50  KLSQSKFLSQIALLYID--IVRGTPAVVQLMI----------LANIVFVGALRETPILLV 97

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA    + A++AEI+R+G+  + +GQ EA  ALGL++ +  + +++PQA++ I+P L 
Sbjct: 98  AGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQTMKFIIIPQAIKKILPALV 157

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+++ LLK +S+   +G  DL+     I +QT + +E +L    IYL L+ +  + M ++
Sbjct: 158 SEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLAVGIIYLILTSIFTILMRKV 217

Query: 389 NAKIALKE 396
              + + +
Sbjct: 218 EKGLKVSD 225


>gi|90579332|ref|ZP_01235142.1| putative ABC-type arginine/histidine transport system, permease
           component [Vibrio angustum S14]
 gi|90440165|gb|EAS65346.1| putative ABC-type arginine/histidine transport system, permease
           component [Vibrio angustum S14]
          Length = 229

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                    T   +   S V+G++ ++    + R+   K        YI  F   G P L
Sbjct: 10  WEIYLEGFYTTVWMVTVSLVIGLICAIPIG-MMRNSSNKFIAFPAWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y        L Q   + G+     +    +A    TAA+ AEI+R  + ++P+G
Sbjct: 67  IQLYLIYY------GLSQVINVQGTMWQEAWFCALVAFILNTAAYTAEIIRGSINSMPQG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +A R ++LP A+R  +P  +++ + ++  S++A  V   DL      
Sbjct: 121 EIEAAKAYGMSPFQAFRRIILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGAARI 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+ L+  I     +L A+ 
Sbjct: 181 VNSRYYAPFESFLFAGLCYMVLTFAIIWVFKKLEARY 217



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L GF  T W+    ++   I    +G  R S+NK +A+    Y+  FR  P L+ +
Sbjct: 10  WEIYLEGFYTTVWMVTVSLVIGLICAIPIGMMRNSSNKFIAFPAWAYIYFFRGTPLLIQL 69

Query: 146 FFLYKSVLSVLPIPDHSI 163
           + +Y  +  V+ +     
Sbjct: 70  YLIYYGLSQVINVQGTMW 87


>gi|89898271|ref|YP_515381.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56]
 gi|89331643|dbj|BAE81236.1| ABC transporter of amino acids [Chlamydophila felis Fe/C-56]
          Length = 217

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 15/227 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L     T+  +    +   +LG+V+       SR+F  +  + +  LY+
Sbjct: 1   MGHWVITAKVLLRGCGYTLFVSGISILCGSLLGLVIGTMT---SRYFPCRITRWMGNLYV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P  + I + Y   F  P +   +           M+  IALS  ++A++AE 
Sbjct: 58  T--VIRGTPLFIQILIFY---FGLPSIIGVD-------PTPLMAGLIALSINSSAYLAEN 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ A+  GQ E+A  LG    +    ++ PQ  ++I+P LT++++ L+K SS+ + V
Sbjct: 106 IRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFKNILPSLTNEFVALIKESSILMVV 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  +L  V   I+++    +E+  I   +YL ++ + +     L  +
Sbjct: 166 GVPELTKVSKDIVSRELNPMEMYSICAGLYLFMTSLFSYVSRLLEKR 212



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAG--RLSANKLVAWICRVYVEVFRNIPPLV 143
           A  +L G   T +++   ++  +++G ++G    R    ++  W+  +YV V R  P  +
Sbjct: 8   AKVLLRGCGYTLFVSGISILCGSLLGLVIGTMTSRYFPCRITRWMGNLYVTVIRGTPLFI 67

Query: 144 VIFFLYKSVLSV 155
            I   Y  + S+
Sbjct: 68  QILIFYFGLPSI 79


>gi|308068846|ref|YP_003870451.1| Probable amino-acid ABC transporter permease protein ytmL
           [Paenibacillus polymyxa E681]
 gi|305858125|gb|ADM69913.1| Probable amino-acid ABC transporter permease protein ytmL
           [Paenibacillus polymyxa E681]
          Length = 259

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 6/193 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R ++    K +  +Y+S F   G P L+ + L Y   +  P L +   I  S+    
Sbjct: 43  ALPRMYNIPFLKRVSQVYVSFF--RGTPILIQLFLVY---YGLPELLKLVDI-NSSRWDV 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                   +  + AFI+EI+RSG+ AV RGQ+EAA ++G++  +    +++PQA+  ++P
Sbjct: 97  LWFAVATYALNSGAFISEIIRSGVEAVDRGQIEAAQSVGMSGYQTFTRIIMPQALAVVVP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             ++  +  LK++SLA  +G  ++     T+ + T   +E  +    IYL +S+++    
Sbjct: 157 VFSNLVIGNLKDTSLAFTIGAMEMTGKSQTLGSATQHFVETYIALSLIYLVISLILQKLF 216

Query: 386 NRLNAKIALKEKK 398
             L   +   E +
Sbjct: 217 KVLENTLLRHEHR 229



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 36/76 (47%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++  S ++   IIG LV   R+     +  + +VYV  FR  P L+ +F +Y  +  +
Sbjct: 24  TLFIVASSLVLGLIIGLLVALPRMYNIPFLKRVSQVYVSFFRGTPILIQLFLVYYGLPEL 83

Query: 156 LPIPDHSIVLPFGMFL 171
           L + D +      ++ 
Sbjct: 84  LKLVDINSSRWDVLWF 99


>gi|304386275|ref|ZP_07368608.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|304327632|gb|EFL94859.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 216

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 18/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                FS V+G + ++     SR        A  +  I   ++  +P LV+    Y +  
Sbjct: 24  LIALFFSLVIGSLFAIMEVLPSRL-------ARTIGRIYVEVVRNIPLLVVTMFFYIV-- 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F +  I L+ YT+AFIAE VR+G+ +V  GQMEAA + G+T
Sbjct: 75  ---------IPRYVPAVNGFTAGTIGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGMT 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+ VG  I + T   I  
Sbjct: 126 FSQAMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMYVGNDIASTTFDTINS 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            L+   +YL +++ ++ +M  L  +
Sbjct: 186 YLVVGVLYLIITMPLSYYMRYLEKR 210



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T   +   +  + +IG+L     +  ++L   I R+YVEV RNIP LVV  F 
Sbjct: 12  LFSGLGQTLLCSLIALFFSLVIGSLFAIMEVLPSRLARTIGRIYVEVVRNIPLLVVTMFF 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  +   +P  +       G+ +     
Sbjct: 72  YIVIPRYVPAVNGFTAGTIGLTIYTSAF 99


>gi|238853886|ref|ZP_04644249.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
 gi|238833472|gb|EEQ25746.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
          Length = 212

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  LS    T+  +     FS +LG+  +L           K G+A+  +YI  F   
Sbjct: 8   HWSEFLSGFWNTILCSLIALFFSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  + +I      +   P +              F +  I L+ YT+AFIAE VR+G+ 
Sbjct: 63  PLLVITMIF-----YLVVPQIW--------FKVSSFAAGTIGLTLYTSAFIAETVRAGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQME A + G+T+ +A R V+LPQA++ +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 SVGDGQMEGARSNGMTYTQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   + + I   ++    YL L++ ++ +M  L  K+A
Sbjct: 170 YQADVIAFSSFETINTYVVVGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++ +  L GF NT   +   +  + I+G       ++ NK    +  VY+E+FRNIP LV
Sbjct: 7   NHWSEFLSGFWNTILCSLIALFFSLILGVGFALLEVAPNKFGRAVAHVYIEIFRNIPLLV 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +    Y  V  +            G+ L     
Sbjct: 67  ITMIFYLVVPQIWFKVSSFAAGTIGLTLYTSAF 99


>gi|331015347|gb|EGH95403.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 277

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +          +   + + L L + RL+ + + +   A  + Y        +
Sbjct: 59  YAELIVKGIETTVQLAFVAWCMAMAVALLLVSIRLTGNMYAERLVAGYVSYH-----RNV 113

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   I  S  S E++   IAL    AA+ +E +RSGL A
Sbjct: 114 PTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 170

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 171 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 230

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 231 ATREVENYTFRTFEAYLVATVVYLAIS 257



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ N     +   YV   RN+P LV 
Sbjct: 59  YAELIVKGIETTVQLAFVAWCMAMAVALLLVSIRLTGNMYAERLVAGYVSYHRNVPTLVQ 118

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 119 LMLWYFGIPTLLSESTQIWLSGYS 142


>gi|297624654|ref|YP_003706088.1| polar amino acid ABC transporter inner membrane subunit [Truepera
           radiovictrix DSM 17093]
 gi|297165834|gb|ADI15545.1| polar amino acid ABC transporter, inner membrane subunit [Truepera
           radiovictrix DSM 17093]
          Length = 417

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMS 268
              E        LY+   +I G+P LV+I     L+   P+     +  GG    P  M 
Sbjct: 237 RSREHPLAVFAELYVD--MIRGIPMLVII-----LYVGFPLQAALRDATGGLLNMPILMR 289

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +A++   AA++AEI R+G+ A+P+GQ+EAA +LGL+  ++ R V+LPQA+R + PPL 
Sbjct: 290 GGVAIALGYAAYMAEIFRAGIEAIPKGQLEAARSLGLSSWQSARFVVLPQALRIVTPPLG 349

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ +LK++SL   +G  +L  +         Q          +Y+ L++  +  +  L
Sbjct: 350 NEFIAMLKDTSLLSILGVRELTQLTREYQASNFQVFPPFNTVALLYIGLTLAASSLLKWL 409

Query: 389 NAKIALKE 396
             +     
Sbjct: 410 EGRTKFGR 417


>gi|16759799|ref|NP_455416.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|16764250|ref|NP_459865.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142428|ref|NP_805770.1| arginine transporter permease ArtQ [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56414021|ref|YP_151096.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62179451|ref|YP_215868.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161614846|ref|YP_001588811.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167550403|ref|ZP_02344160.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992142|ref|ZP_02573240.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168236834|ref|ZP_02661892.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168240770|ref|ZP_02665702.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168263591|ref|ZP_02685564.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466507|ref|ZP_02700369.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168819947|ref|ZP_02831947.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194445319|ref|YP_002040127.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194451872|ref|YP_002044919.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194735457|ref|YP_002113982.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197251860|ref|YP_002145842.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197263220|ref|ZP_03163294.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197362944|ref|YP_002142581.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|198242126|ref|YP_002214853.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200390813|ref|ZP_03217424.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929852|ref|ZP_03220873.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205352138|ref|YP_002225939.1| arginine transporter permease ArtQ [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856321|ref|YP_002242972.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213052699|ref|ZP_03345577.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213428040|ref|ZP_03360790.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213609525|ref|ZP_03369351.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|224582739|ref|YP_002636537.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|238913406|ref|ZP_04657243.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|25296626|pir||AF0607 arginine transport system permease protein ArtQ STY0922 [imported]
           - Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16419397|gb|AAL19824.1| arginine 3rd transport system [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502092|emb|CAD05328.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138058|gb|AAO69619.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56128278|gb|AAV77784.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|62127084|gb|AAX64787.1| ABC superfamily (membrane), arginine 3rd transport system
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364210|gb|ABX67978.1| hypothetical protein SPAB_02599 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403982|gb|ACF64204.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194410176|gb|ACF70395.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194710959|gb|ACF90180.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195630931|gb|EDX49517.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197094421|emb|CAR59937.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|197215563|gb|ACH52960.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197241475|gb|EDY24095.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197290078|gb|EDY29435.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197936642|gb|ACH73975.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199603258|gb|EDZ01804.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204320846|gb|EDZ06047.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205271919|emb|CAR36762.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205324501|gb|EDZ12340.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329604|gb|EDZ16368.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205339979|gb|EDZ26743.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205343089|gb|EDZ29853.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205347747|gb|EDZ34378.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708124|emb|CAR32417.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467266|gb|ACN45096.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261246144|emb|CBG23947.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992651|gb|ACY87536.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157471|emb|CBW16961.1| arginine transport system permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312911916|dbj|BAJ35890.1| arginine ABC transporter permease protein ArtQ [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320085163|emb|CBY94950.1| Arginine transport system permease protein artQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321223250|gb|EFX48319.1| Arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322616363|gb|EFY13272.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619613|gb|EFY16488.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622691|gb|EFY19536.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628603|gb|EFY25390.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631540|gb|EFY28296.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637067|gb|EFY33770.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641734|gb|EFY38370.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644473|gb|EFY41013.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650066|gb|EFY46483.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654141|gb|EFY50464.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658056|gb|EFY54323.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663530|gb|EFY59732.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670266|gb|EFY66406.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671502|gb|EFY67624.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676858|gb|EFY72925.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682783|gb|EFY78802.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686462|gb|EFY82444.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322713920|gb|EFZ05491.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323129193|gb|ADX16623.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323196084|gb|EFZ81247.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196770|gb|EFZ81914.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202951|gb|EFZ87985.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208991|gb|EFZ93928.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211896|gb|EFZ96724.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215172|gb|EFZ99917.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222375|gb|EGA06753.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323223891|gb|EGA08190.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229850|gb|EGA13973.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233075|gb|EGA17171.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240810|gb|EGA24852.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243127|gb|EGA27147.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248669|gb|EGA32597.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251670|gb|EGA35537.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323261930|gb|EGA45496.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323271987|gb|EGA55402.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326622606|gb|EGE28951.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326627181|gb|EGE33524.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 238

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F                       + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIIGLALAMFFAVWESVKWRPIAWIGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + LH     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 SGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRFERR 236


>gi|116629193|ref|YP_814365.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri ATCC 33323]
 gi|282851028|ref|ZP_06260402.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|300362121|ref|ZP_07058298.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|311111029|ref|ZP_07712426.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus gasseri MV-22]
 gi|116094775|gb|ABJ59927.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Lactobacillus gasseri ATCC 33323]
 gi|282557980|gb|EFB63568.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|300354740|gb|EFJ70611.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|311066183|gb|EFQ46523.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus gasseri MV-22]
          Length = 212

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  LS    T+  +     FS +LG+  +L           K G+A+  +YI  F   
Sbjct: 8   HWSEFLSGFWNTILCSLIALFFSLILGVGFALLEVA-----PNKFGRAVAHVYIEIFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  + +I      +   P +              F +  I L+ YT+AFIAE VR+G+ 
Sbjct: 63  PLLVITMIF-----YLVVPQIW--------FKVSGFAAGTIGLTLYTSAFIAETVRAGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQME A + G+T+ +A R V+LPQA++ +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 SVGDGQMEGARSNGMTYTQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   + + I   ++    YL L++ ++ +M  L  K+A
Sbjct: 170 YQADVIAFSSFETINTYVVVGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++ +  L GF NT   +   +  + I+G       ++ NK    +  VY+E+FRNIP LV
Sbjct: 7   NHWSEFLSGFWNTILCSLIALFFSLILGVGFALLEVAPNKFGRAVAHVYIEIFRNIPLLV 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +    Y  V  +            G+ L     
Sbjct: 67  ITMIFYLVVPQIWFKVSGFAAGTIGLTLYTSAF 99


>gi|295703708|ref|YP_003596783.1| putative amino acid ABC transporter permease [Bacillus megaterium
           DSM 319]
 gi|294801367|gb|ADF38433.1| putative amino acid ABC transporter, permease protein [Bacillus
           megaterium DSM 319]
          Length = 241

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 110/218 (50%), Gaps = 7/218 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + S  LG +  LF   + R +     K + ++Y+S   + G P LV + + + 
Sbjct: 21  PLTLTISIISMALGSIFGLFI-AVCRIYKIPLLKQIAVIYVSF--MRGTPLLVQLYVFFY 77

Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  +     Q   +GG T+SP  +   IA +  T+A+ +E+ RS +  + RGQ EAA
Sbjct: 78  GIPIFIEFLNQTQGWHLGGDTISP-LIYALIAYTLNTSAYQSEVFRSSIQTIDRGQFEAA 136

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G+T  +A + ++ PQ++ + IP L + +++L+K +SLA AV   +++++   I N  
Sbjct: 137 YSIGMTTFQAIKRIIFPQSLVAAIPNLGNIFISLIKATSLAFAVKVVEIMAISKVIANDG 196

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + +E+ L+   IY  L          +  K++  E +
Sbjct: 197 YRYLEMYLVASLIYWILCFFFERLFVVIEKKLSHYELR 234



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 28/73 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++   M   +I G  +   R+    L+  I  +YV   R  P LV ++  +  +   
Sbjct: 23  TLTISIISMALGSIFGLFIAVCRIYKIPLLKQIAVIYVSFMRGTPLLVQLYVFFYGIPIF 82

Query: 156 LPIPDHSIVLPFG 168
           +   + +     G
Sbjct: 83  IEFLNQTQGWHLG 95


>gi|213970630|ref|ZP_03398756.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301382055|ref|ZP_07230473.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060918|ref|ZP_07252459.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302133951|ref|ZP_07259941.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213924627|gb|EEB58196.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 324

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    +  +  L   V S+   P     +    F +   L   + T+       VFS VL
Sbjct: 42  RWAGSIFAVLVLVAIVHSLATNPRWEWGVFGQWFFSPSVLRGLSQTLLLTLLSTVFSIVL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G  L+L     +R        AL   YI  F       +++I   +   +D  VL     
Sbjct: 102 GTALAL-----ARLSRSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLAVPFT 156

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F       V  +F    + LS   AA+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 157 DLVFAQWSTVDVLSQFTVAVLGLSLMQAAYTAEIIRGGLIGVDAGQHEAAAALGLPASRR 216

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 217 VFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 276

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 277 TVWYLIITTVLTSAQYYVERHFARGTAR 304



 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     + + ++GT +   RLS + L+A +   Y+  FR++P L+V+  LY
Sbjct: 81  LRGLSQTLLLTLLSTVFSIVLGTALALARLSRSPLLAALAWGYIWFFRSMPALLVLIILY 140

Query: 150 KSVLSVLP 157
                   
Sbjct: 141 NFAYLYDH 148


>gi|162147152|ref|YP_001601613.1| putative inner membrane amino-acid ABC transporter permease
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785729|emb|CAP55300.1| putative inner membrane amino-acid ABC transporter permease protein
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 499

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +  +   AL  LY+   ++ G P L+ I   +               G       F++
Sbjct: 319 RRYGPRWLGALATLYVE--IVRGTPLLIQILFIFY-----------ALPGIGLRLSPFVA 365

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL    AA+ AE  R+GL +V RGQ+EAA+AL +TH +A R V++PQA+R +IP +T
Sbjct: 366 GVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTHMQALRFVVVPQAVRMVIPVMT 425

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++LLK+SSL   +   +L      + +         L+    YL L +         
Sbjct: 426 NDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGLLIGTAYLLLGLPFVRLARMA 485

Query: 389 NAKIALKEKK 398
            A+    +++
Sbjct: 486 EARFQAGQRR 495



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 40/106 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+   +L G V T  ++   M+ A  +G  +   R    + +  +  +YVE+ R  P L+
Sbjct: 285 SFLPLLLHGAVLTLAVSACAMVVAVGLGLALALLRRYGPRWLGALATLYVEIVRGTPLLI 344

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            I F++ ++  +       +     + +N              +  
Sbjct: 345 QILFIFYALPGIGLRLSPFVAGVVALGMNYAAYEAENYRAGLQSVA 390


>gi|221197836|ref|ZP_03570882.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD2M]
 gi|221204606|ref|ZP_03577623.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD2]
 gi|221175463|gb|EEE07893.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD2]
 gi|221181768|gb|EEE14169.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD2M]
          Length = 230

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  +VL++   R                  L   Y+S  L+ G P LV I +
Sbjct: 26  VLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 83

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 84  IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 133 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEMIAAT 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    IY  L  ++         +++L  + 
Sbjct: 193 YQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPTRH 230


>gi|157146481|ref|YP_001453800.1| arginine transporter permease subunit ArtQ [Citrobacter koseri ATCC
           BAA-895]
 gi|157083686|gb|ABV13364.1| hypothetical protein CKO_02241 [Citrobacter koseri ATCC BAA-895]
          Length = 238

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPT 234
               + V + ++G+VL++                        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIIGLVLAMIFAVWESVKWRPIAWTGSAVVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L+    + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLMLSDGFTINLGFVQIPLQMQIEDFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 SGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLRATRFERR 236


>gi|308174187|ref|YP_003920892.1| high affinity arginine ABC transporter permease [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607051|emb|CBI43422.1| high affinity arginine ABC transporter (permease) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 219

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + F    +    KI + S V+G+VL +    L +       K +   Y 
Sbjct: 1   MNLDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVL-SLFKISTISPLKWIADFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + + Y   F  P L  F          +F +   ALS  +AA+++EI
Sbjct: 60  SIF--RGTPLVLQLMIIY---FGMPQLLGFQI-------DQFWAAVTALSLNSAAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ A+ +GQ EAA+ALG+ + K  + +LLPQA ++I P + ++ + L K S++   +
Sbjct: 108 IRAGINAIDKGQKEAAVALGVPYGKMMKHLLLPQAFKNISPAIINELITLTKESAIVTVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++         T   +E +++  FIY  L +++A     +  K+   +
Sbjct: 168 GLGDIMRRAYQSGAATYNYLEPLIVAGFIYYVLVLILAFIGKGVERKLKAND 219



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 34/88 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++       IL G   T  +     +   ++G ++   ++S    + WI   Y  +F
Sbjct: 3   LDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVLSLFKISTISPLKWIADFYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           R  P ++ +  +Y  +  +L        
Sbjct: 63  RGTPLVLQLMIIYFGMPQLLGFQIDQFW 90


>gi|19704137|ref|NP_603699.1| amino acid ABC transporter permease [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296328658|ref|ZP_06871175.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|19714347|gb|AAL94998.1| Amino acid transport system permease protein [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|296154257|gb|EFG95058.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 236

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 98/176 (55%), Gaps = 10/176 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           + YI   +I G P +V + +   L F          +G    +P  +   IA    + A+
Sbjct: 71  IAYIYIDVIRGTPVVVQLMILANLIF----------VGILRETPILIIGGIAFGLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+  + +GQMEA  ALGL++ +A R +++PQA+++I+P L S+++ LLK +S+
Sbjct: 121 VAEIIRAGIEGLDKGQMEAGRALGLSYSQAMRKIIVPQAVKNILPALVSEFITLLKETSI 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +G  DL+     I +QT + +E +L    IYL L+ +   FM ++   + + +
Sbjct: 181 IGFIGGIDLLRSANIITSQTYRGVEPLLAVGIIYLILTSIFTAFMRKVERGLKVSD 236


>gi|323127705|gb|ADX25002.1| Putative amino acid ABC transporter [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 228

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 8/231 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F             +T+  +A +  F  ++G++++L      +    K    L   
Sbjct: 1   MDLSFLPKYWAYFNYGVLVTIMISASVVFFGTIIGVLVTLI-----KRTQIKPLTWLVNT 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F   G P +V I + +   +    +    F   +      +   I +S  + A+I+
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMY-FNQMPTIGFGVLNLDFSRLLPGIIIISLNSGAYIS 112

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ AVP+GQ+EAA +LG+  R A R V+LPQA ++I+P L ++++ ++K+S+L  
Sbjct: 113 EIVRAGIEAVPKGQLEAAYSLGIRPRNAMRYVILPQAFKNILPALGNEFITIIKDSALLQ 172

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +G  +L +   ++   T   I  +L+  F YL ++ +++  +  L  ++A
Sbjct: 173 TIGVMELWNGAQSVATATYSPIAPLLVAAFYYLMVTTVLSQLLAVLERRMA 223



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++ S +   TIIG LV   + +  K + W+   YV +FR  P +V 
Sbjct: 9   YWAYFNYGVLVTIMISASVVFFGTIIGVLVTLIKRTQIKPLTWLVNTYVWIFRGTPMVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           I   +  +           VL 
Sbjct: 69  IMIAFAWMYFNQMPTIGFGVLN 90


>gi|268590212|ref|ZP_06124433.1| arginine ABC transporter, permease protein ArtQ [Providencia
           rettgeri DSM 1131]
 gi|291314493|gb|EFE54946.1| arginine ABC transporter, permease protein ArtQ [Providencia
           rettgeri DSM 1131]
          Length = 246

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 17/228 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPTLV 236
             + V + VLG++L++  T       +             + LP L +  F+ FG   L+
Sbjct: 15  VGLAVSALVLGLILAMLFTAWESVRFKPIAFLGTCWVTLIRGLPELLVVLFVYFGTLQLI 74

Query: 237 LIA-------LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            +        L +     +     F    G      F+   IAL+   A++ ++ +R  L
Sbjct: 75  NLFGDGFDINLGFWQTTIQIDPSIFFANSGEFDYTPFVCGVIALALLYASYASQTLRGAL 134

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP GQ EA  ALGL  R      ++PQ  R  +P L +Q+L LLK+++L   +   DL
Sbjct: 135 KAVPYGQWEAGFALGLNKRTIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDL 194

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    TI+N+T +      I   IYL+++++  + + R+  +    E+
Sbjct: 195 MLQTKTIVNRTHEPFTWYAIVGLIYLAITLVSQVILKRIELRTTRFER 242


>gi|150377913|ref|YP_001314508.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150032460|gb|ABR64575.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 502

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 22/219 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   V+G+VL++     +        +    +Y   F   GLP +V I L  Q 
Sbjct: 35  LAAASTVLGVVIGMVLAIMGISRA-----PWLRIPARIYTDIF--RGLPAIVTILLIGQ- 86

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  +    +ALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 87  --------GFARIGRELFGPSPYPLGILALSLIAGAYIGEIFRSGIQSVDRGQMEACRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            +++ +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 139 SMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           TG  +  +L+    YL +++ +   +N +++++ L +++
Sbjct: 199 TGN-LSPLLLAGVFYLVVTVPLTHVVNAIDSRLRLGKQR 236



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 34/80 (42%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG  NT  LA +  +   +IG ++    +S    +    R+Y ++FR +P +V I  + +
Sbjct: 27  VGLKNTLILAAASTVLGVVIGMVLAIMGISRAPWLRIPARIYTDIFRGLPAIVTILLIGQ 86

Query: 151 SVLSVLPIPDHSIVLPFGMF 170
               +          P G+ 
Sbjct: 87  GFARIGRELFGPSPYPLGIL 106


>gi|325971014|ref|YP_004247205.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta sp. Buddy]
 gi|324026252|gb|ADY13011.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 286

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 118/217 (54%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +    +T        + + V+G +  L +    R  +  +G       +   LI G+P L
Sbjct: 85  IKGAPVTFQATIFAIIGALVIGTITGLGSVSKKRWVNMVSG-------VYVELIRGIPLL 137

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y        +G+F  I G       ++  +ALS    A++ EIVR+G+ A+P+G
Sbjct: 138 VQLIFIYY------AMGRFFKIEGM------IAAVVALSICFGAYMGEIVRAGIQAIPKG 185

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAAIALGL+  +A R V+LPQ ++ ++P + ++++++LK+SSL   +  +D++  G  
Sbjct: 186 QMEAAIALGLSRSQAFRYVILPQTIKVVLPAIGNEFISMLKDSSLVSTIALSDILRKGRE 245

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I++T  ++E +L+   IYL ++++++  +  L  ++
Sbjct: 246 YISRTFLSLETMLVVALIYLIITLLLSRLVGMLEERL 282



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 84  SYATAILV---GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            Y    LV   G   TF      +I A +IGT+ G G +S  + V  +  VYVE+ R IP
Sbjct: 76  PYMDIFLVTIKGAPVTFQATIFAIIGALVIGTITGLGSVSKKRWVNMVSGVYVELIRGIP 135

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV + F+Y ++     
Sbjct: 136 LLVQLIFIYYAMGRFFK 152


>gi|291485151|dbj|BAI86226.1| glutamine ABC transporter, integral membrane protein [Bacillus
           subtilis subsp. natto BEST195]
          Length = 216

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 107/222 (48%), Gaps = 10/222 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N   L              + + V+ +  S               K  PL ++ T  + 
Sbjct: 1   MNVSILFDNFGMYMDGFYHTLLASVIALAGSFVLGVTVAVMRITVFK--PLQWLGTVYVE 58

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  + L+ + +  +F  P                F +  +AL+ YT+AFIAE +R+G+ 
Sbjct: 59  FIRNIPLLLITFVFYFGLP--------NAGLRLDGFQAGTVALTIYTSAFIAEAIRAGIQ 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEAA + G T+ +A   ++LPQA++ ++PPL +Q+LNL+KNSS+   V   DL+
Sbjct: 111 SVSKGQMEAARSSGFTYSQAMLHIILPQAIKIVMPPLGNQFLNLVKNSSILGVVAGLDLM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                + + T    ++ +     YL L+I +++ +N L  ++
Sbjct: 171 YQADLVSSSTLVVFDVYIFVALFYLVLTIPLSIGVNYLEKRL 212



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF +T   +   +  + ++G  V   R++  K + W+  VYVE  RNIP L++ F  Y  
Sbjct: 16  GFYHTLLASVIALAGSFVLGVTVAVMRITVFKPLQWLGTVYVEFIRNIPLLLITFVFYFG 75

Query: 152 VLSV 155
           + + 
Sbjct: 76  LPNA 79


>gi|271500847|ref|YP_003333872.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344402|gb|ACZ77167.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 238

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
            + LP + +  F+ FG   L+L+    + L+     +     I    VSP F+   IALS
Sbjct: 54  LRGLPEILVVLFIYFGSSQLMLMLSDGFTLNLGVIQIPVKLAIDNFEVSP-FLCGVIALS 112

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ ++ +R  L AVP+GQ E+  ALG++     R +++PQ  R  +P L +Q+L L
Sbjct: 113 LLYAAYASQTLRGALKAVPQGQWESGQALGMSKGVIFRRLIMPQMWRHALPGLGNQWLVL 172

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK+++L   +   DL+    +I  +T +     +I   IYL++++   + + ++  +   
Sbjct: 173 LKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLAITLFSQVILKKIETRATR 232

Query: 395 KEKK 398
            E++
Sbjct: 233 FERR 236


>gi|127514093|ref|YP_001095290.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella loihica PV-4]
 gi|126639388|gb|ABO25031.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella loihica PV-4]
          Length = 226

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 108/221 (48%), Gaps = 15/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      +     + +F+ +LG +L +  T L +       +    LY+   +I G P +
Sbjct: 21  IYLILNGLKVTLIVTLFAMILGAILGVATT-LMKMSSRWYLRWPANLYVG--VIRGTPVV 77

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y +            +  +    +  +  IA    + A+I+EI+R+G+ AV +G
Sbjct: 78  VQLVILYFI------------VLATWDVDKVSAAIIAFGLNSGAYISEIIRAGIQAVDKG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL+     + V+LPQA+++I+P L ++++ LLK +++   +G  DL+  G  
Sbjct: 126 QTEAARSLGLSQAVTMKEVILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRSGEI 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I ++T +    +     IYL+L+      +++   ++   +
Sbjct: 186 IRSRTFEDSVPLFTCALIYLALTYSFTFMLSKFEKRLKQSD 226



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    MI   I+G      ++S+   + W   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTLFAMILGAILGVATTLMKMSSRWYLRWPANLYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSVL 156
           Y  VL+  
Sbjct: 84  YFIVLATW 91


>gi|308178341|ref|YP_003917747.1| L-cystine ABC transporter inner membrane subunit TcyB [Arthrobacter
           arilaitensis Re117]
 gi|307745804|emb|CBT76776.1| L-cystine ABC transporter, inner membrane subunit TcyB
           [Arthrobacter arilaitensis Re117]
          Length = 221

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 94/184 (51%), Gaps = 13/184 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +   ++  +YIS  +I G P LV + + +   +  P +       G T+ P + S
Sbjct: 45  RISKNRVISSIARVYIS--IIRGTPLLVQLFVIF---YGMPSV-------GLTIDP-WPS 91

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA S     + AEI+R+ +++VP+GQ EA   LG++  +    ++LPQA R  +PPL+
Sbjct: 92  AIIAFSLNIGGYAAEIIRAAILSVPQGQWEAGYTLGMSRTRTLYRLILPQATRVAVPPLS 151

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++L+K++SLA  +   ++      I   T + + +      IY  + ++++   N +
Sbjct: 152 NSFISLVKDTSLASTILVTEMFRKAQEITASTYEFLLLYCEAAAIYWVICLVLSALQNSV 211

Query: 389 NAKI 392
             ++
Sbjct: 212 EGRL 215



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 38/90 (42%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S     L     T  LA   M    +I  L+   R+S N++++ I RVY+ + R  P L
Sbjct: 10  DSLGPLALGAITATIPLALVSMALGLLIALLMALMRISKNRVISSIARVYISIIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV    D          LN
Sbjct: 70  VQLFVIFYGMPSVGLTIDPWPSAIIAFSLN 99


>gi|154684862|ref|YP_001420023.1| YxeN [Bacillus amyloliquefaciens FZB42]
 gi|154350713|gb|ABS72792.1| YxeN [Bacillus amyloliquefaciens FZB42]
          Length = 224

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 15/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F        +    +T+       VF+ + G++L+L                L  +YI
Sbjct: 6   WGFMFSAFPALIEALPITLLMAVAAMVFAVIGGLILALITKN-----RVPVLHQLSKVYI 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+PTLV + L Y   +  P L       G +      +  I LS   AA++AEI
Sbjct: 61  SFF--RGVPTLVQLFLIY---YGLPQL-----FPGMSKMTALTAAIIGLSLKNAAYLAEI 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L +V  GQ+EA +++G+T  +A R ++ PQA+R+ +P   + ++ LLK +SLA  +
Sbjct: 111 FRAALNSVDEGQLEACLSVGMTKSQAYRRIIFPQAVRNALPATGNTFIGLLKETSLAFTL 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  ++ + G    +   +  E  L    +Y  L+I+ ++  + L   I+   +
Sbjct: 171 GVMEMFAQGKMYASGNLKYFETYLAVAVMYWILTIIYSVLQDLLERAISKPYR 223



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 39/89 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +    S   A++     T  +A + M+ A I G ++     +   ++  + +VY+  F
Sbjct: 4   IDWGFMFSAFPALIEALPITLLMAVAAMVFAVIGGLILALITKNRVPVLHQLSKVYISFF 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           R +P LV +F +Y  +  + P       L
Sbjct: 64  RGVPTLVQLFLIYYGLPQLFPGMSKMTAL 92


>gi|254362205|ref|ZP_04978320.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|153093777|gb|EDN74716.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
          Length = 238

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +   +L  +P    + V            +   +++      F+   ++ + ++L     
Sbjct: 1   MLNDLLLSIPFMTQARVDLVLSGFWPMVQAAFLVSIPLAIASFIIGMLIAVAVALVRISP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +  F  +    L   YIS  +I G P LV I + +   +  P +G F             
Sbjct: 61  ATGFFHRLLLWLVKGYIS--IIRGTPMLVQICIVF---YGLPAIGIF--------IDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E +R+ + +VP+GQ EA   +G+T+ +  R ++ PQA R  +PPL
Sbjct: 108 AAIIGFSLNIGAYGSETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++ L   R
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFLIQAR 227

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 228 LEVRFNR 234


>gi|89896132|ref|YP_519619.1| hypothetical protein DSY3386 [Desulfitobacterium hafniense Y51]
 gi|89335580|dbj|BAE85175.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 224

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 10/228 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M    + L           K+F  + V+ + L L    L R       ++   +YI  F 
Sbjct: 6   MDYIMQILGPMLNGTGVTLKMFFVTIVMSVPLGLML-SLGRISRFGVLRSAIGVYIWVF- 63

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P ++ +   Y   F  P +     IG   +  +F +  +A     AA+ AEI R+G
Sbjct: 64  -RGTPLMLQLLFVY---FGLPFI---PVIGEILILTDFQAAILAFVLNYAAYFAEIFRAG 116

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ RGQ E A ALG+T+ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   D
Sbjct: 117 IQSIERGQYEGARALGMTYGQLMRRIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMND 176

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+     ++ +    +   ++    YL +++++     RL  + A  +
Sbjct: 177 LLRTTRALVQRDF-TMTPFIVAGVFYLLMTLVLTWGFQRLEKRYAAYD 223



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 39/79 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  ++ +  +G ++  GR+S   ++     VY+ VFR  P ++ + F+
Sbjct: 16  MLNGTGVTLKMFFVTIVMSVPLGLMLSLGRISRFGVLRSAIGVYIWVFRGTPLMLQLLFV 75

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           Y  +  +  I +  I+  F
Sbjct: 76  YFGLPFIPVIGEILILTDF 94


>gi|65317794|ref|ZP_00390753.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
          Length = 233

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 19/234 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
            +    M      L    +T+       V   ++G++ + F     R  + K   ++  +
Sbjct: 3   HMFEIFMSTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF-----RISNNKVLNSIAHV 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   +I G P +V IA+ Y              I    V   F +  IAL+ +  A+I 
Sbjct: 58  YI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWAGAIALAIHNGAYIT 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL  
Sbjct: 104 EIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            VG A+L   G +I     Q ++  +I    YL L ++    +N L  ++  KE
Sbjct: 164 YVGMAELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 217



 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 15  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 75  YFGITSVVVFTPFWAGAIALAIHNGAYI 102


>gi|300718315|ref|YP_003743118.1| polar amino acid ABC transporter, permease protein [Erwinia
           billingiae Eb661]
 gi|299064151|emb|CAX61271.1| polar amino acid ABC transporter, permease protein [Erwinia
           billingiae Eb661]
          Length = 249

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 18/212 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +F +G++L L      R F           + +   ++ L  + L+ + +  +F
Sbjct: 36  VLAVLLAFPIGVLLGLARISPWRWFS----------WPAACWVYVLRGIPLLMVVFWTYF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   N  G       F ++   L  Y +A+IAEIVR G+ A+P GQ EA+ ALG++
Sbjct: 86  CVPLLIGHNISG-------FATMLCTLVIYESAYIAEIVRGGIQALPGGQYEASRALGMS 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
           + K  R+V+LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   +  +
Sbjct: 139 YLKTLRVVILPQALYNALPSLVSQLVSIIKDSTLGYVINVPELTYAANQVNNQLLTKPFQ 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  I    Y  +   +    N+L  +IA K +
Sbjct: 199 VFAIVAISYYLICFSLTWLANKLEERIARKRR 230



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 36/69 (52%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  ++   ++ A  IG L+G  R+S  +  +W    +V V R IP L+V+F+ Y
Sbjct: 25  LGGVLCTLLISVLAVLLAFPIGVLLGLARISPWRWFSWPAACWVYVLRGIPLLMVVFWTY 84

Query: 150 KSVLSVLPI 158
             V  ++  
Sbjct: 85  FCVPLLIGH 93


>gi|306835974|ref|ZP_07468966.1| amino acid ABC superfamily ATP binding cassette transporter
           [Corynebacterium accolens ATCC 49726]
 gi|304568140|gb|EFM43713.1| amino acid ABC superfamily ATP binding cassette transporter
           [Corynebacterium accolens ATCC 49726]
          Length = 317

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 62/260 (23%), Positives = 114/260 (43%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            +  +   +L +  +   +    FG     + L    + +       I + S ++G++  
Sbjct: 32  WLCAVVLLILGLWFVIASARNEAFGWDTYFQYLFDQRIAIASLHTIAITILSMIIGVIGG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
                + R       +A+   +I  ++  G P  V +     L   +    LG       
Sbjct: 92  AIL-AVMRMSPNPILRAIS--WIFLWIFRGTPIYVQLVFWGLLSAIYQSINLGFAEVSLQ 148

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           S ++  F    + L    AA++AEIVRSG+ +VP GQ EA+ ALG++     R  +LPQA
Sbjct: 149 SVLTNAFFLAVMGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMSWWMTMRRTVLPQA 208

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  +++++LLK SSL VA+ +  ++      I     Q I ++++    YL ++
Sbjct: 209 MRIIIPPTGNEFISLLKTSSLVVAIPYTHEIFGRATDISAALFQPIPLLMVAASWYLVIT 268

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +    L         +
Sbjct: 269 SLLMVGQYFLERHFERGATR 288



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 83  SSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +Y   +      +  ++T  +    MI   I G ++   R+S N ++  I  +++ +FR
Sbjct: 58  DTYFQYLFDQRIAIASLHTIAITILSMIIGVIGGAILAVMRMSPNPILRAISWIFLWIFR 117

Query: 138 NIPPLVVIFFLY 149
             P  V + F  
Sbjct: 118 GTPIYVQLVFWG 129


>gi|270290756|ref|ZP_06196980.1| glutamine transport system permease [Pediococcus acidilactici 7_4]
 gi|270280816|gb|EFA26650.1| glutamine transport system permease [Pediococcus acidilactici 7_4]
          Length = 216

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 18/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                FS V+G + ++     SR        A  +  I   ++  +P LV+    Y +  
Sbjct: 24  LIALFFSLVIGSLFAIMEVLPSRL-------ARTIGRIYVEVVRNIPLLVVTMFFYIV-- 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F +  I L+ YT+AFIAE VR+G+ +V  GQMEAA + G+T
Sbjct: 75  ---------IPRYIPAVNGFTAGTIGLTIYTSAFIAETVRAGIQSVSGGQMEAARSNGMT 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+ VG  I + T   I  
Sbjct: 126 FSQAMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMYVGNDIASTTFDTINS 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            L+   +YL +++ ++ +M  L  +
Sbjct: 186 YLVVGVLYLIITMPLSYYMRYLEKR 210



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T   +   +  + +IG+L     +  ++L   I R+YVEV RNIP LVV  F 
Sbjct: 12  LFSGLGQTLLCSLIALFFSLVIGSLFAIMEVLPSRLARTIGRIYVEVVRNIPLLVVTMFF 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  +   +P  +       G+ +     
Sbjct: 72  YIVIPRYIPAVNGFTAGTIGLTIYTSAF 99


>gi|205375465|ref|ZP_03228253.1| amino acid ABC transporter ATP-binding protein [Bacillus
           coahuilensis m4-4]
          Length = 216

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 20/234 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                 +   +  L     T        + + V+G+  ++      +    K  + +   
Sbjct: 3   HFFQEFVDTFDIFLKGMGWTFLVTFVSVLIALVIGLFFAIL-----KISGIKALEWIANT 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F++ G P +  I + Y             F   S    +F S+ + L+ +  A+IA
Sbjct: 58  YI--FVVRGTPLIAQIFIFY-------------FGLASLNISDFWSVAMGLAFHNGAYIA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R  + ++ +GQ EA  +LG++     R ++LPQA R  +PPL +Q++  LK+SSLA 
Sbjct: 103 EILRGSIQSIDKGQREAGRSLGMSQGLTMRRIILPQAFRRALPPLGNQFIIALKDSSLAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G  +L +V  T+ +     +  +LI    YL L  +    + RL  ++++ +
Sbjct: 163 FIGMYELFNVATTLGSNNFDNMTYLLIVSVYYLVLVYLFTFIVQRLEKRMSISD 216



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   TF + F  ++ A +IG      ++S  K + WI   Y+ V R  P +  IF  
Sbjct: 15  FLKGMGWTFLVTFVSVLIALVIGLFFAILKISGIKALEWIANTYIFVVRGTPLIAQIFIF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + S+    D   V     F N   +
Sbjct: 75  YFGLASLNIS-DFWSVAMGLAFHNGAYI 101


>gi|298369218|ref|ZP_06980536.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283221|gb|EFI24708.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria sp. oral taxon 014 str. F0314]
          Length = 248

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 9/192 (4%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY-- 270
               + + LLY++ F   G P  V I +   + F   V      +     + E    Y  
Sbjct: 59  VWLVRKISLLYVTLF--RGTPLFVQIIIWAYVWFPIFVHPVNGILLSGEEANELRKAYGP 116

Query: 271 -----IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                +AL   + A+I+EI R+G+ ++ +GQMEAA +LGL +R+A R V+LPQA+R ++P
Sbjct: 117 LIIGSLALIANSGAYISEIFRAGIQSIDKGQMEAARSLGLNYRQAMRYVVLPQALRRMLP 176

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL S+++ LLK+SSL   +G  +L++V   I  +     E +     IYL L+  +    
Sbjct: 177 PLASEFITLLKDSSLLSVIGVVELLAVQKAISGRYSVYEEPLYTVALIYLVLTTCLGWMF 236

Query: 386 NRLNAKIALKEK 397
            RL  +     +
Sbjct: 237 LRLENRYNQPRR 248


>gi|157692904|ref|YP_001487366.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032]
 gi|157681662|gb|ABV62806.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus SAFR-032]
          Length = 230

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 13/220 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             + F    +     I V S  LG +L +  T L +    K    L   Y S F   G P
Sbjct: 21  PQMPFILEGLKVTLSIVVVSLFLGFILGILLT-LCKISVFKPLIWLADFYTSIF--RGTP 77

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ + + Y   F  P L  F          ++ +   A +  +AA+++EI+R+G+ A+ 
Sbjct: 78  LVLQLLIIY---FGLPQLLGFQI-------DQYWAAVAAFTLNSAAYVSEIIRAGINAID 127

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA+ALG+ + K  + +LLPQA ++I P L ++ + L K S++   +G  D++   
Sbjct: 128 KGQKEAAVALGIPYAKMMKDLLLPQAFKNISPALVNETITLTKESAIVTVIGLGDVMRRA 187

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 T   +E ++    IY  + +++      +  K+ 
Sbjct: 188 YQAGAVTYNYLEPLIFAGLIYYVIVLVLTFVGKSVERKLK 227



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 32/83 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    +    I+G L+   ++S  K + W+   Y  +FR  P ++ +  +
Sbjct: 26  ILEGLKVTLSIVVVSLFLGFILGILLTLCKISVFKPLIWLADFYTSIFRGTPLVLQLLII 85

Query: 149 YKSVLSVLPIPDHSIVLPFGMFL 171
           Y  +  +L             F 
Sbjct: 86  YFGLPQLLGFQIDQYWAAVAAFT 108


>gi|329908118|ref|ZP_08274834.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546759|gb|EGF31696.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 260

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + + V+GIVL + A  L +       +     YI    I G P LV +   +  
Sbjct: 60  VTVALTLVAGVIGIVLGMLA-ALGKLSSFLPLRWAAGFYIWA--IRGTPLLVQVLFVF-- 114

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L             +F S  +AL+    A+ AE +RSG++AV +GQ EAA +LG
Sbjct: 115 -LALPALVP------GLQLSDFYSAVVALAFNAGAYNAEAIRSGILAVHKGQAEAARSLG 167

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  R V+ PQ+MR  +PPL + +++LLK+SSLA  +G  +L ++G  I + T Q I
Sbjct: 168 LSPFQTFRDVVFPQSMRIALPPLVNNFVSLLKDSSLAYVIGVVELSNIGNRIQSVTFQPI 227

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + +    IYL L+ ++      +  ++ ++ +
Sbjct: 228 PVFVTVAAIYLILTSVMTQISGAIERQLDVERQ 260



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 26/136 (19%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R    +V I LA+   + FLW             +++ + +L E  G            
Sbjct: 13  SRQRRSAVTIALAITALLAFLWL------------MAIPMAWLPEPIG------------ 48

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
               A     G   T  L     +   ++G L   G+LS+   + W    Y+   R  P 
Sbjct: 49  --PAAQQFAEGARVTVALTLVAGVIGIVLGMLAALGKLSSFLPLRWAAGFYIWAIRGTPL 106

Query: 142 LVVIFFLYKSVLSVLP 157
           LV + F++ ++ +++P
Sbjct: 107 LVQVLFVFLALPALVP 122


>gi|317407116|gb|EFV87120.1| ABC transporter [Achromobacter xylosoxidans C54]
          Length = 217

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 102/213 (47%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +F  +  L + L L    L+     K G    L+    +L+ G P ++ +   Y  
Sbjct: 17  VTLTLFFITLALAVPLGLV---LALLRISKWGFVSQLVNGYIWLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ E +  LG
Sbjct: 74  LPFVPVV--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGSKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   D++     I+ +     
Sbjct: 126 MTYLQTLRRIVLPQMVQRVLPPMSNETITLVKDTSLIYVLALNDILRTARGIVQRDF-TT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              L+    YL +++++  F  R+  + A  ++
Sbjct: 185 TPFLVAAAFYLIMTLVLTWFFQRMEKRYAKYDQ 217



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L F  +  A  +G ++   R+S    V+ +   Y+ + R  P ++ + F+
Sbjct: 11  LAQGAKVTLTLFFITLALAVPLGLVLALLRISKWGFVSQLVNGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  +       P
Sbjct: 71  YFALPFVPVVGVRLPDFP 88


>gi|229042503|ref|ZP_04190248.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH676]
 gi|296501401|ref|YP_003663101.1| glutamine transport system permease GlnP [Bacillus thuringiensis
           BMB171]
 gi|228726856|gb|EEL78068.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH676]
 gi|296322453|gb|ADH05381.1| glutamine transport system permease protein glnP [Bacillus
           thuringiensis BMB171]
          Length = 218

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 118/220 (53%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|158426030|ref|YP_001527322.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332919|dbj|BAF90404.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 217

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +    F  + +     +   +F+ G V  LF   L+R       +A+   YI  F   
Sbjct: 5   FTSAEFMFLLMAVRWTLLLSAIAFLGGAVGGLFV-ALARTSQWAWLRAIAGAYIQVF--Q 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + L +            NF G S      M+  I L+   AAF+ EI R  + 
Sbjct: 62  GTPLLMQLFLVFF---------GANFFGLSI--DPLMAAAIGLTLNGAAFLGEIWRGCIQ 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EAA ALGL +    + ++LPQA +  + P     + L+K++SLA  +GF +L 
Sbjct: 111 AIPKGQWEAATALGLHYTTRMKEIILPQAAKIAVAPTVGFLVLLVKSTSLASIIGFVELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  + N T +   +  I   IY  L   ++LF  RL  K     +
Sbjct: 171 RAGQIVNNATFRPFLVFGIVAAIYFVLCWPLSLFSRRLEKKFGTVSR 217



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+    T  L+    +   + G  V   R S    +  I   Y++VF+  P L+ +F +
Sbjct: 13  LLMAVRWTLLLSAIAFLGGAVGGLFVALARTSQWAWLRAIAGAYIQVFQGTPLLMQLFLV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +          D  +    G+ LN              A 
Sbjct: 73  FFGANFFGLSIDPLMAAAIGLTLNGAAFLGEIWRGCIQAI 112


>gi|206558855|ref|YP_002229615.1| putative amino acid ABC transporter permease [Burkholderia
           cenocepacia J2315]
 gi|198034892|emb|CAR50764.1| putative amino acid ABC transporter permease protein [Burkholderia
           cenocepacia J2315]
          Length = 226

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF +G++L+ F   L+R F  +  +A+   YI  F   G P LV + + +    
Sbjct: 24  VPLTLASFAIGLLLA-FGAALTRLFGPRWAQAVVRFYIWLF--RGSPLLVQLFVIFY--- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T
Sbjct: 78  --------GLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R  +LPQA R  +P L++ +++L+K++SLA  +   ++      I   T + + +
Sbjct: 130 RAQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLIL 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 IYL  S +++    RL  +   
Sbjct: 190 YTEAALIYLLFSSVLSTLQRRLETRFGR 217



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G V T  L  +      ++       RL   +    + R Y+ +FR  P LV +F +
Sbjct: 16  LVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAVVRFYIWLFRGSPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + +V  + D       G  LN
Sbjct: 76  FYGLPNVGIVLDPLTAAVIGFSLN 99


>gi|183598313|ref|ZP_02959806.1| hypothetical protein PROSTU_01703 [Providencia stuartii ATCC 25827]
 gi|188020487|gb|EDU58527.1| hypothetical protein PROSTU_01703 [Providencia stuartii ATCC 25827]
          Length = 246

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 103/228 (45%), Gaps = 17/228 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPTLV 236
             + V + +LG++L++  T       +             + LP L +  F+ FG   L+
Sbjct: 15  VGLAVSALILGLILAMLFTAWESVRFKPIAFLGTCWVTLIRGLPELLVVLFVYFGTLQLI 74

Query: 237 LIA-------LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            I        L +     +     F    G      F    +AL+   A++ ++ +R  L
Sbjct: 75  NILGDGIEINLGFWQTTLQIDPSIFFADSGEFDFTPFACGVVALALLYASYASQTLRGAL 134

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP GQ EA +ALGLT R      ++PQ  R  +P L +Q+L LLK+++L   +   DL
Sbjct: 135 KAVPYGQWEAGLALGLTKRTIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDL 194

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    TI+N+T +      I   IYL+++++  + + R+  +    E+
Sbjct: 195 MLQTKTIVNRTHEPFTWYAIVGLIYLAITLLSQVILKRIELRTTRFER 242


>gi|325277060|ref|ZP_08142718.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324097810|gb|EGB95998.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 273

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 72/282 (25%), Positives = 123/282 (43%), Gaps = 17/282 (6%)

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           S+ K  A      +  FR    L+    L+   ++     D    +    F N  G    
Sbjct: 6   SSPKPAAKATGASLFGFR-TRLLLTWLALFGLFVAFFLSFDLKFAIIVEKFPNLAGFKLG 64

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                  A + +F  +  +V+S+   FA  L+R         +   Y S F    L    
Sbjct: 65  PNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSGSAVLVGIASFYTSFFRGTPLLI-- 122

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 Q+      L Q   + G+       +  IALS    A+++EI R+G++ V RGQ
Sbjct: 123 ------QILLIYLGLPQVGLVPGAI-----SAGIIALSLNYGAYLSEIFRAGILGVARGQ 171

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA+ALG+   +    ++LPQAMR IIPP  +Q++++LK+SSL   +G  +++ +  + 
Sbjct: 172 REAALALGMRPPQTFCYIVLPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSY 231

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              + + +E++     IY  LSI++ L   RL        ++
Sbjct: 232 GRSSYRYLEMLTTAAIIYWVLSILLELLQARLERHFGKAYQR 273



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L    M+ + ++G      RLS + ++  I   Y   FR  P L+ I  +
Sbjct: 68  FLQGAALTLFLCLCSMVVSVLLGFAAALARLSGSAVLVGIASFYTSFFRGTPLLIQILLI 127

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  V  +P         + LN 
Sbjct: 128 YLGLPQVGLVPGAISAGIIALSLNY 152


>gi|313836987|gb|EFS74701.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA2]
 gi|314929423|gb|EFS93254.1| ABC transporter, permease protein [Propionibacterium acnes
           HL044PA1]
 gi|314971493|gb|EFT15591.1| ABC transporter, permease protein [Propionibacterium acnes
           HL037PA3]
 gi|328906825|gb|EGG26591.1| ABC-type transport system, permease protein [Propionibacterium sp.
           P08]
          Length = 314

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 12/244 (4%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +    + +             +     +   + +LG  ++L    + R       + + 
Sbjct: 42  RNPNYQWSVVWLYLRDVKVITGIGYTILLTFAAMLLGTAVALL-MAIMRQSRNPVLRGVS 100

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--------VSPEFMSLYIA 272
             YI  F+  G+P    +     L    P L      GG          +     +  I 
Sbjct: 101 WAYI--FVFRGVPVYTQLVFWGLLAVLYPTLSVGVPFGGPQLASLETEKIVTALAAAIIG 158

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L     A++AEI RSGL +V  GQ EAA ALG+      R V++PQAMR IIPPL ++ +
Sbjct: 159 LGLNEGAYLAEITRSGLESVDAGQTEAAKALGMKPSLIMRRVIIPQAMRVIIPPLGNETI 218

Query: 333 NLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +LK +SL +AV F  DL      I N+    I ++++  F YL ++ ++ +  + L   
Sbjct: 219 GMLKTTSLVLAVPFTLDLQYATSAIANRIYAPIPLLIVAAFWYLVMTSVLMVGQHFLEQY 278

Query: 392 IALK 395
               
Sbjct: 279 FGRG 282



 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 28/67 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L F+ M+  T +  L+   R S N ++  +   Y+ VFR +P    + F  
Sbjct: 61  ITGIGYTILLTFAAMLLGTAVALLMAIMRQSRNPVLRGVSWAYIFVFRGVPVYTQLVFWG 120

Query: 150 KSVLSVL 156
              +   
Sbjct: 121 LLAVLYP 127


>gi|261368004|ref|ZP_05980887.1| glutamine ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
 gi|282569991|gb|EFB75526.1| glutamine ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
          Length = 255

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 99/189 (52%), Gaps = 13/189 (6%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
           H +   G    +  +   +I G P +V + +   + F                    M  
Sbjct: 80  HRNPVLGFVNVICQVYATVIRGTPMMVQLLIMSMVIFASSRNFT-------------MVG 126

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL   + A+++EI+R GL+AV  GQMEA  +LGL +     L+++PQA+RSI+P L +
Sbjct: 127 ALALGINSGAYVSEIIRGGLMAVDPGQMEAGRSLGLNYITTMVLIIIPQAIRSILPSLGN 186

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++ LLK++SL   +G  +L+     ++N+T +A+  +L    IYL L ++ +  + +L 
Sbjct: 187 EFIILLKDTSLITVIGGKELLYAAQGVMNRTYEAMFPLLGVAAIYLVLVLLFSALLGKLE 246

Query: 390 AKIALKEKK 398
            ++A  +++
Sbjct: 247 RRLAQSDRR 255


>gi|168334973|ref|ZP_02693091.1| polar amino acid ABC transporter, inner membrane subunit
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 235

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 112/231 (48%), Gaps = 18/231 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR----HFHEKTGKALPLLYIST 226
                L     T+  +    +    +G+V+++     S+    +   K  K +  +Y+  
Sbjct: 19  YIFTILDGLYNTLLLSLIATIIGLAIGLVVAVIGMLESKGTIENSILKVLKIIAKVYVD- 77

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V ++  + +      L            P  M   IA    + A+++E++R
Sbjct: 78  -IIRGTPAVVQVSFLWLVVLAPLNL------------PRVMVGGIAFGINSGAYMSEVIR 124

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ ++ RGQ EA  +LGL++ +   L++LPQA R ++P L ++++NL+K +++   +G 
Sbjct: 125 GGITSIDRGQTEAGRSLGLSYFQTMHLIILPQAFRQMLPSLVNEFINLIKETAIIGFIGG 184

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL+     +I+ T      +++   IYL+++ ++  FM  +  K++ + +
Sbjct: 185 MDLMKAANILISTTYNFEIPLIMVALIYLTITSILTYFMRGIENKLSKQNR 235


>gi|193069396|ref|ZP_03050351.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E110019]
 gi|192957349|gb|EDV87797.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E110019]
          Length = 238

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFNINLGLVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|47569972|ref|ZP_00240636.1| amino acid ABC transporter, permease protein VC0009 [Bacillus
           cereus G9241]
 gi|47553370|gb|EAL11757.1| amino acid ABC transporter, permease protein VC0009 [Bacillus
           cereus G9241]
          Length = 222

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +             +     I V S ++  V+ +    ++++   K   ++  +YI
Sbjct: 1   MKFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKN-KTKFLYSIARVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV +   + L+F  P +         TV     +  I LS   AA+++EI
Sbjct: 60  SFF--RGTPLLVQL---FVLYFGLPQI-----FPTFTVLTAMQATLIGLSLNNAAYLSEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R    AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+ A+
Sbjct: 110 IRGSFNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G A++++    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 170 GVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 217



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    MI + +IG  +     +  K +  I RVY+  FR  P LV +F LY  +  +
Sbjct: 22  TLGITVVSMIISFVIGIGLAIITKNKTKFLYSIARVYISFFRGTPLLVQLFVLYFGLPQI 81

Query: 156 LPIPDHSIVLP 166
            P       + 
Sbjct: 82  FPTFTVLTAMQ 92


>gi|153811655|ref|ZP_01964323.1| hypothetical protein RUMOBE_02047 [Ruminococcus obeum ATCC 29174]
 gi|149832396|gb|EDM87481.1| hypothetical protein RUMOBE_02047 [Ruminococcus obeum ATCC 29174]
          Length = 223

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 105/211 (49%), Gaps = 7/211 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +       +L +F   LS        K      IS+  +  +  + +I L Y ++F
Sbjct: 20  LLLALCGLFFACILGMFFGLLS------VLKNKACRIISSIFVDVIRGVPMIVLAYFIYF 73

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P     N +G +       +  + L+    A++AEI+R+G+++V  GQMEAA +LGL 
Sbjct: 74  GVP-YCLNNMMGFNFTLTALQAGTVCLALNCGAYMAEIIRAGILSVDSGQMEAARSLGLP 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A   V+LPQA+R++IP + +Q++  LK++S+   +GF +LV+    ++  +  + + 
Sbjct: 133 YSRAMIRVVLPQAIRTMIPSIINQFIITLKDTSILSVIGFPELVNTAKNVVANSFMSFQT 192

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I   +YL +  +++     +  ++    K
Sbjct: 193 WGIVAVMYLIVITILSKVAKIVERRLNRGRK 223



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L+    T  LA  G+  A I+G   G   +  NK    I  ++V+V R +P +V
Sbjct: 7   RYGNLLLLAMGQTLLLALCGLFFACILGMFFGLLSVLKNKACRIISSIFVDVIRGVPMIV 66

Query: 144 VIFFLYKSVL 153
           + +F+Y  V 
Sbjct: 67  LAYFIYFGVP 76


>gi|307130487|ref|YP_003882503.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306528016|gb|ADM97946.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
          Length = 256

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 18/211 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V SF LG+++ L     +R    +  +     ++ T     L  + L+ + +  +F
Sbjct: 36  LLAVVLSFPLGVLVGL-----ARLSPWRGLRWAATAWVYT-----LRGIPLMMVVFWTYF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   N  G       F ++   L  Y +A+IAEIVR G+ A+P GQ EA+ ALG++
Sbjct: 86  CVPLLIGQNISG-------FSTMLCTLVIYESAYIAEIVRGGIQALPHGQYEASRALGMS 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
           + K  RLV+LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   +  +
Sbjct: 139 YLKTLRLVVLPQALFNSLPSLVSQLVSIIKDSTLGYVINVPELTYAANQVSNQLLTKPFQ 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  I    Y  +   +    N+L + IA K 
Sbjct: 199 VFAIVALSYYIICFSLTWLANKLESYIANKR 229



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  ++   ++ +  +G LVG  RLS  + + W    +V   R IP ++V+F+ Y
Sbjct: 25  LGGVLCTLLISLLAVVLSFPLGVLVGLARLSPWRGLRWAATAWVYTLRGIPLMMVVFWTY 84

Query: 150 KSVLSVLPIPDHSIVLP 166
             V  ++          
Sbjct: 85  FCVPLLIGQNISGFSTM 101


>gi|261343375|ref|ZP_05971020.1| arginine ABC transporter, permease protein ArtQ [Providencia
           rustigianii DSM 4541]
 gi|282568515|gb|EFB74050.1| arginine ABC transporter, permease protein ArtQ [Providencia
           rustigianii DSM 4541]
          Length = 246

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 17/228 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPTLV 236
             + + + +LG++L++          +             + LP L +  F+ FG   L+
Sbjct: 15  VGLAISALILGLILAMLFMAWESVRFKPIAFLGTCWVTLIRGLPELLVVLFVYFGTLQLI 74

Query: 237 LIA-------LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            +        L +     +     F    G      F+   IAL+   A++ ++ +R  L
Sbjct: 75  NLLGDGIAINLGFWQGTLQVDPSIFFADSGQFDYTPFVCGVIALALLYASYASQTLRGAL 134

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP GQ EA +ALGLT R      ++PQ  R  +P L +Q+L LLK+++L   +   DL
Sbjct: 135 KAVPYGQWEAGLALGLTKRTIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDL 194

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    TI+N+T +      I   IYL+++++  L + R+  +    E+
Sbjct: 195 MLQTKTIVNRTHEPFTWYAIVGLIYLAITLLSQLVLKRIELRTTRFER 242


>gi|171741042|ref|ZP_02916849.1| hypothetical protein BIFDEN_00108 [Bifidobacterium dentium ATCC
           27678]
 gi|171276656|gb|EDT44317.1| hypothetical protein BIFDEN_00108 [Bifidobacterium dentium ATCC
           27678]
          Length = 235

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-GQFNFIGGSTV 262
           R       + +   YI  F    + T ++    +      +    P    +F  +   +V
Sbjct: 2   RKSINPVLRGVSWFYIWFFRGTPVYTQLVFWGLFAVLIPRIGIGIPFTSIEFWSVDSQSV 61

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F + ++ L    AA++AEIVR+GL AV  GQ EAA ALG+      R ++LPQAMR 
Sbjct: 62  ITAFNAAWLGLVLNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMRRIVLPQAMRI 121

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++    YL ++ ++
Sbjct: 122 IIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVACIWYLVITSIL 181

Query: 382 ALFMNRLNAKIA 393
            +  +RL     
Sbjct: 182 MIIQSRLEKHFG 193


>gi|323489528|ref|ZP_08094755.1| putative ABC transporter (permease) [Planococcus donghaensis
           MPA1U2]
 gi|323396659|gb|EGA89478.1| putative ABC transporter (permease) [Planococcus donghaensis
           MPA1U2]
          Length = 225

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 14/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L F   L  + L +    +     I V S ++G+++  F   L+R    K  +    
Sbjct: 5   EWGLLFDPALAIKSLPYVLEGIGYTLLISVVSMIVGVIIGFFL-SLARTSQLKILQFPAR 63

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G+P LV++ L   L+F  PV+                +  I  S  +AA+I
Sbjct: 64  LYISF--MRGVPILVILFL---LYFALPVV--------GIEFTAVQAALIGFSINSAAYI 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ RS L +V +GQ E++ ALGLT+ ++ R ++LPQ++R  +PPL++ YL+L+K SSLA
Sbjct: 111 AEVFRSSLASVDKGQWESSKALGLTYWQSMRRIILPQSIRIALPPLSNVYLDLIKASSLA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   ++      +  +    + ++++   IY ++  ++ +  N L  K A
Sbjct: 171 AMITVPEIFQKARIVGAREYDLLTMLILVALIYWAICSIMTILQNYLEKKYA 222



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++   MI   IIG  +   R S  K++ +  R+Y+   R +P LV++F 
Sbjct: 21  YVLEGIGYTLLISVVSMIVGVIIGFFLSLARTSQLKILQFPARLYISFMRGVPILVILFL 80

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           LY ++  V            G  +N
Sbjct: 81  LYFALPVVGIEFTAVQAALIGFSIN 105


>gi|313668108|ref|YP_004048392.1| binding-protein-dependent transport systems hypothetical protein
           [Neisseria lactamica ST-640]
 gi|313005570|emb|CBN87006.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria lactamica 020-06]
          Length = 248

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DKPVLGQFNFIGGSTVSPEF 266
              +   LLY++ F   G P  V I +   + F       D  ++     +         
Sbjct: 60  WALRKFSLLYVTLF--RGTPLFVQIVIWAYVWFLFFVNSSDGILVSGEAAVELRRGYGPL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LG+T+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGMTYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +   +L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVPELSYVQKTITGRYSIYEEPLYTVALIYLLMTTFLGWIFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLEKRYNPQHR 248


>gi|293365081|ref|ZP_06611798.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307702210|ref|ZP_07639170.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|315612852|ref|ZP_07887763.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis ATCC 49296]
 gi|322374624|ref|ZP_08049138.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|331266721|ref|YP_004326351.1| ABC transporter membrane-spanning permease-polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
 gi|291316531|gb|EFE56967.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307624223|gb|EFO03200.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|315314962|gb|EFU63003.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus sanguinis ATCC 49296]
 gi|321280124|gb|EFX57163.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|326683393|emb|CBZ01011.1| ABC transporter membrane-spanning permease-polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
          Length = 227

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG ++ +     ++    K       +Y+  F   G 
Sbjct: 7   PKYLPYFNYGALITVLISILVVCLGTIIGVLL-AFAQRSRFKPLVWFANVYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQVGILG--VDLSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      I   +KK
Sbjct: 182 ATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFEKHIGQGDKK 227



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++   +   TIIG L+   + S  K + W   VYV +FR  P +V 
Sbjct: 9   YLPYFNYGALITVLISILVVCLGTIIGVLLAFAQRSRFKPLVWFANVYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|299537135|ref|ZP_07050438.1| glutamine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298727376|gb|EFI67948.1| glutamine transport system permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 241

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 91/224 (40%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI-- 229
               L     T+  ++   +    +G  + +  T   R    K      + +I T  +  
Sbjct: 14  WQMFLRGAYYTLLISSISTIIGAFIGFFIGIMHTIPVRKKGVKFYSLKLINFILTCYVEF 73

Query: 230 -FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y              I          +  + +S  T A++AEIVR G
Sbjct: 74  FRGTPMIVQAMVVYYG----------LDIAFGIDMHFITAGILVVSLNTGAYMAEIVRGG 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++++  GQ EAA A+G+ H +    V+LPQ  R+++P   +Q +  +K++++   +G  +
Sbjct: 124 IVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQLIMNIKDTAVLNVIGVTE 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L     +I     +  E   +   +Y  ++   +  +  +  ++
Sbjct: 184 LFFQTKSISGNNFRYFESFFVACVLYFIMTFTASRILLYVEKRL 227



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 10/77 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAG----------RLSANKLVAWICRVYVEV 135
               L G   T  ++    I    IG  +G            +  + KL+ +I   YVE 
Sbjct: 14  WQMFLRGAYYTLLISSISTIIGAFIGFFIGIMHTIPVRKKGVKFYSLKLINFILTCYVEF 73

Query: 136 FRNIPPLVVIFFLYKSV 152
           FR  P +V    +Y  +
Sbjct: 74  FRGTPMIVQAMVVYYGL 90


>gi|283455572|ref|YP_003360136.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|283102206|gb|ADB09312.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
          Length = 240

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 7/198 (3%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL-GQFNF 256
               + R       + +   YI  F    + T ++    +      +    P    +F  
Sbjct: 1   MVLAVMRKSINPVLRGVSWFYIWFFRGTPVYTQLVFWGLFAVLIPRIGIGIPFTSIEFWS 60

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +   +V   F + ++ L    AA++AEIVR+GL AV  GQ EAA ALG+      R ++L
Sbjct: 61  VDSQSVITAFNAAWLGLVLNEAAYLAEIVRAGLEAVDPGQTEAAKALGMKRSLIMRRIVL 120

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           PQAMR IIPP  ++++ +LK +SL  AV F  +L      I  +  + I ++++    YL
Sbjct: 121 PQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLELQFATTAIATRLYKPIPLLIVACIWYL 180

Query: 376 SLSIMIALFMNRLNAKIA 393
            ++ ++ +  +RL     
Sbjct: 181 VITSILMIIQSRLEKHFG 198


>gi|262041041|ref|ZP_06014260.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259041599|gb|EEW42651.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 238

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEK----------TGKALPLLYISTFLIFGLPT 234
               + V + V+G+VL++    L                   + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALVIGLVLAMLFAVLESVKWRPVAWLATGIVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + +      +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTIPLGFTQIPVQMQIENFDVSP-FLCGAIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 QGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     +I   IYL ++++    + R++ +    E+K
Sbjct: 192 KSIATRTQEPFNWYIIAAAIYLVITLLSQYILKRIDQRATRFERK 236


>gi|261409440|ref|YP_003245681.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Paenibacillus
           sp. Y412MC10]
 gi|329922585|ref|ZP_08278160.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus sp. HGF5]
 gi|261285903|gb|ACX67874.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus sp. Y412MC10]
 gi|328942129|gb|EGG38411.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus sp. HGF5]
          Length = 220

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 113/237 (47%), Gaps = 17/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                +   +  + LS   +T+      FV + ++G++L+  A            K  PL
Sbjct: 1   MWDWKYVFEILPQLLSALKMTVWVTLCAFVVALIIGLLLAFAARS----------KFKPL 50

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             I+  +I  +    L+   + L++  P+L   +        P F +  I L  + + ++
Sbjct: 51  SLITKGIIEFIRNTPLLVQVFFLYYSLPLLTGISI-------PAFYAGVIGLGLHYSTYL 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+ RSG+  VP+GQ EAA AL  T  +  R ++LPQA+  IIP L +  + + K + + 
Sbjct: 104 SEVYRSGIEGVPKGQWEAATALNYTKSQTWRSIILPQAVPPIIPVLGNYLIVMFKETPIL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            A+   +++     I++Q+ +A E   +   ++L +S + +L + RL  ++ L+  K
Sbjct: 164 CAITLVEMMLTAKNIVSQSFRAFEPYTLVGILFLIISYIASLLVQRLEKRLNLQRGK 220



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T W+     + A IIG L+     S  K ++ I +  +E  RN P LV +FFL
Sbjct: 14  LLSALKMTVWVTLCAFVVALIIGLLLAFAARSKFKPLSLITKGIIEFIRNTPLLVQVFFL 73

Query: 149 YKSVL 153
           Y S+ 
Sbjct: 74  YYSLP 78


>gi|308186173|ref|YP_003930304.1| ABC transport system permease protein [Pantoea vagans C9-1]
 gi|308056683|gb|ADO08855.1| putative ABC transport system permease protein [Pantoea vagans
           C9-1]
          Length = 246

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F+ +F+ G VL++    L R    +   A    YI  F   G P ++ + L Y 
Sbjct: 19  PVTLGLFISAFLCGGVLAVGILAL-RMSRWRGLSAFARGYILVF--RGSPLMIQLFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S   P     F    +ALS  TAA+ AEI+R  L+AVP GQ+EA
Sbjct: 76  ------GLGQFGVIRHSIFWPFLREPFTCAVLALSLCTAAYTAEILRGALLAVPPGQVEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GMACGMSRGLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T + +E+ L    IYL L+ +I      L  ++    K
Sbjct: 190 TYRTMEVFLCAAAIYLILNFIIVQLYALLERRLTPVHK 227


>gi|296126896|ref|YP_003634148.1| polar amino acid ABC transporter, inner membrane subunit
           [Brachyspira murdochii DSM 12563]
 gi|296018712|gb|ADG71949.1| polar amino acid ABC transporter, inner membrane subunit
           [Brachyspira murdochii DSM 12563]
          Length = 237

 Score =  143 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 5/218 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +     ++ T A   V   VLGI ++L    LS  +  K  K        + + F 
Sbjct: 18  YIYIIKGLIFSVGTTALATVIGIVLGIFIALLQ--LSEFYPFKNSKKFSNFNPLSKIAF- 74

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
               V I     +     +     F+     +P  +   IA    + A++AEI+R+G+ +
Sbjct: 75  --LYVNILRGTPVVVQLMIWANVVFVDSLRDTPILIIAAIAFGINSGAYVAEIIRAGIQS 132

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQMEAA ALG+ +  + + +++PQA++ I+PPL S+++ LLK +S+   +G  DL+ 
Sbjct: 133 LDKGQMEAARALGMNYSLSMKEIIIPQAIKKILPPLVSEFIALLKETSVVGFIGGVDLLR 192

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
               I +QT + +E ++    IY  L+ + A+FM ++ 
Sbjct: 193 SANIITSQTYRGVEPLIAVGIIYFILTSIFAMFMRKVE 230


>gi|317492207|ref|ZP_07950636.1| His/Glu/Gln/Arg/opine family amino ABC transporter
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919546|gb|EFV40876.1| His/Glu/Gln/Arg/opine family amino ABC transporter
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 231

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 116/242 (47%), Gaps = 14/242 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           +  + D+   L +   + +   S  +  +     + + SF+ GI++  F T L+R +  K
Sbjct: 4   LHGLTDYIHGLAWLQLMIDSFWSLLSAGLQFTLPLAILSFIGGIIVG-FITALARLYAPK 62

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K +   Y+  ++I G P LV + L +                       F +  I  +
Sbjct: 63  PVKWIFDFYV--WVIRGTPLLVQLFLIFY-----------GLPSAGITLDAFPAALIGFT 109

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+ +EI+R  +I+VP+GQ EA+ ++G++  +A R V+LPQ++   +PPL++ +++L
Sbjct: 110 LSVGAYTSEIIRGAIISVPKGQWEASYSIGMSSSQAMRRVILPQSVFVSLPPLSNSFISL 169

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +K++SLA  +   ++      I++ T + + + +    IYL  S ++    NRL      
Sbjct: 170 IKDTSLAAVITVPEMFLAAQRIVSVTYEPLILYVEAALIYLMFSTVLGKLQNRLEIYYRR 229

Query: 395 KE 396
            E
Sbjct: 230 YE 231



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 37/90 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+ + +  G   T  LA    I   I+G +    RL A K V WI   YV V R  P L
Sbjct: 22  DSFWSLLSAGLQFTLPLAILSFIGGIIVGFITALARLYAPKPVKWIFDFYVWVIRGTPLL 81

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S     D       G  L+
Sbjct: 82  VQLFLIFYGLPSAGITLDAFPAALIGFTLS 111


>gi|294793049|ref|ZP_06758195.1| amino acid ABC transporter, permease protein [Veillonella sp.
           6_1_27]
 gi|294794912|ref|ZP_06760047.1| amino acid ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|294454274|gb|EFG22648.1| amino acid ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|294455994|gb|EFG24358.1| amino acid ABC transporter, permease protein [Veillonella sp.
           6_1_27]
          Length = 238

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 12/241 (4%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
            P     +   F +    + +      +     +F   ++L I   +    L      K 
Sbjct: 9   WPFSSRVLKESFMLDYLLQIIPTIADGLKVTVSLFCIVWILSIPGGILMAML---RLSKL 65

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
                L+    +L+ G P ++ I   Y   +  P++       G+    +  +  +    
Sbjct: 66  PLVDKLVDAFVYLMRGTPLMLQILFVY---YALPIIT-----DGAIQMDDATAAVLTFVL 117

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA++ EI R G+ ++ RGQ E A  LG T+ +  R ++LPQ  + ++PPL ++ +NLL
Sbjct: 118 NYAAYLCEIFRGGIQSISRGQYEGAKVLGFTYAQTMRKIILPQMFKRVLPPLANETINLL 177

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K++SL   +   D++ +  +I+ +    I   L+    YL  + ++    N L  + A+ 
Sbjct: 178 KDTSLVYVLAMNDILRITKSIVQRDFD-ISAFLVAALFYLIFTFILTNIFNYLERRFAVY 236

Query: 396 E 396
           E
Sbjct: 237 E 237



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L     I +   G L+   RLS   LV  +   +V + R  P ++ I F+
Sbjct: 32  IADGLKVTVSLFCIVWILSIPGGILMAMLRLSKLPLVDKLVDAFVYLMRGTPLMLQILFV 91

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 92  YYALP 96


>gi|308071440|ref|YP_003873045.1| Probable amino-acid ABC transporter permease protein ytmL
           [Paenibacillus polymyxa E681]
 gi|305860719|gb|ADM72507.1| Probable amino-acid ABC transporter permease protein ytmL
           [Paenibacillus polymyxa E681]
          Length = 238

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 104/235 (44%), Gaps = 7/235 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    + L      +     I   S +LG ++ L AT L R +       L  LY+S 
Sbjct: 5   FDLDYMLKSLPQIVEYLPVTLWIAFVSMLLGGIIGL-ATALIRIYKVPVLAPLSTLYVS- 62

Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIA 282
             I G P +V + L Y     F      ++ F+    V   P  +   ++ S     +++
Sbjct: 63  -YIRGTPLIVQLFLVYYGIPKFLYYFQSEYGFLQQFNVYVIPPELFALLSFSLNLGGYLS 121

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+ + +V RGQ EAA ++G++  +    ++LPQA+   +P L +  ++ +K++S   
Sbjct: 122 ETFRAAIHSVDRGQFEAANSIGMSQTQIMLKIVLPQALTVALPNLGNTLISTVKDTSFIF 181

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  D++     +  +     E+ +    IY  + I+I   +  L  +I + E+
Sbjct: 182 MIGVVDMMGQAKIMGARALAFFEVYVAVSLIYWLVCIIIERGLVVLEKRIRIYER 236



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T W+AF  M+   IIG      R+    ++A +  +YV   R  P +V +F +Y  +   
Sbjct: 24  TLWIAFVSMLLGGIIGLATALIRIYKVPVLAPLSTLYVSYIRGTPLIVQLFLVYYGIPKF 83


>gi|227890383|ref|ZP_04008188.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849197|gb|EEJ59283.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 212

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  LS    T+  +     FS +LG+  +L           K G+A+  +YI  F   
Sbjct: 8   HWSEFLSGFWNTILCSVIALFFSLILGVGFALLVVA-----PNKFGRAVAHVYIEIFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  + +I      +   P +              F +  I L+ YT+AFIAE VR+G+ 
Sbjct: 63  PLLVITMIF-----YLIVPQIW--------FKVSGFAAGTIGLTLYTSAFIAETVRAGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQME A + G+T+ +A R V+LPQA++ +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 SVGDGQMEGARSNGMTYTQAMRYVILPQALKIVIPPLGNQFINLIKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   + + I   ++    YL L++ ++ +M  L  K+A
Sbjct: 170 YQADVIAFSSFETINTYVVVGLFYLVLTLPLSYYMRHLEKKLA 212



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++ +  L GF NT   +   +  + I+G       ++ NK    +  VY+E+FRNIP LV
Sbjct: 7   NHWSEFLSGFWNTILCSVIALFFSLILGVGFALLVVAPNKFGRAVAHVYIEIFRNIPLLV 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +    Y  V  +            G+ L     
Sbjct: 67  ITMIFYLIVPQIWFKVSGFAAGTIGLTLYTSAF 99


>gi|315649608|ref|ZP_07902693.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus vortex V453]
 gi|315275081|gb|EFU38456.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Paenibacillus vortex V453]
          Length = 220

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 112/237 (47%), Gaps = 17/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                +   +    LS   +T+      FV + ++G++L+  A            +  P+
Sbjct: 1   MWDWNYVFDILPELLSALKMTVWVTLCAFVVALIIGLLLAFAARS----------QWKPV 50

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             ++  +I  +    L+   + L++  P+L   +        P F +  I L  + + ++
Sbjct: 51  SLMTKGIIEFIRNTPLLVQVFFLYYSLPLLTGISI-------PAFYAGVIGLGLHYSTYL 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+ RSG+  VP+GQ EAA AL  T  +  R ++LPQA+  IIP L +  + + K + + 
Sbjct: 104 SEVYRSGIEGVPKGQWEAATALNYTKTQTWRSIILPQAVPPIIPVLGNYLIVMFKETPIL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            A+   +++     I++Q+ +A E   +   ++L +S + +L + RL  ++ L+  K
Sbjct: 164 CAITLVEMMLTAKNIVSQSFRAFEPYTLVGILFLIISYIASLLVQRLEKRMNLQRGK 220



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T W+     + A IIG L+     S  K V+ + +  +E  RN P LV +FFL
Sbjct: 14  LLSALKMTVWVTLCAFVVALIIGLLLAFAARSQWKPVSLMTKGIIEFIRNTPLLVQVFFL 73

Query: 149 YKSVL 153
           Y S+ 
Sbjct: 74  YYSLP 78


>gi|239833358|ref|ZP_04681686.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821421|gb|EEQ92990.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 224

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 18/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L+    T+         SFVLGI  +L         +     A P+ +   +L  
Sbjct: 17  YTDLLLTGLWWTLVLTVASAFLSFVLGIAFALVV------LYAPAILAWPVRFFM-WLFM 69

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + L Y           F  +      P   +  I LS + A + A+I+R+G++
Sbjct: 70  GTPLLLQLFLIY-----------FGLVQIGIDIPALGAGIIGLSLHFAVYNADIIRAGIV 118

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQME A ++G +H +A R V++PQA+R+ IPP+ +  + LLK++SL   +G A+LV
Sbjct: 119 AVDPGQMEGARSIGFSHGQALRYVVIPQAIRNTIPPIGNNMIVLLKDTSLVSIIGIAELV 178

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 I++T    E  +    IY  +++++   + R+  K+ +  
Sbjct: 179 HSAQLAISETFSPFEFYITVAAIYYVVNLVLEAGLRRIERKVEVTR 224


>gi|254512963|ref|ZP_05125029.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11]
 gi|221532962|gb|EEE35957.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacteraceae bacterium KLH11]
          Length = 280

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 117/228 (51%), Gaps = 1/228 (0%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           GM  N +    P          F +    +G+V ++  + +S       G  + LL +S 
Sbjct: 51  GMGYNWQWYRVPQFLYRNTEVGFEWGEIPIGLVATIKLSVISFLLATAIGLLVALLRLSG 110

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I     +  + L   +     +   +  +G       + +  + L+ + +A I+EI R
Sbjct: 111 LVIGTAVAVGYLELIRNIPLLVLLYLFYYVLGPIFGLDRYTASILTLAVFHSALISEIFR 170

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P GQ EAA ++G++  +A R ++LPQ++R ++PP+T + ++L+K+S++   +  
Sbjct: 171 AGINAIPSGQWEAAKSIGMSTPQAYRYIILPQSVRFMLPPMTGEVVHLIKSSAIVSVIAV 230

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+L + G  II+ T  + EI      +YL +++++++ ++ L  K A+
Sbjct: 231 AELTTFGRNIISDTYMSFEIWFTIALVYLVVTLILSIGVSHLEKKYAV 278



 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +G V T  L+    + AT IG LV   RLS   +   +   Y+E+ RNIP
Sbjct: 80  IGLVATIKLSVISFLLATAIGLLVALLRLSGLVIGTAVAVGYLELIRNIP 129


>gi|160900970|ref|YP_001566552.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160366554|gb|ABX38167.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 217

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 12/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+FV +  L I L L    L R         L   YI  +L+ G P ++ +   Y  
Sbjct: 17  VTLKLFVITLALSIPLGLSL-ALMRISRFPALSRLVGGYI--WLMRGTPLMLQMLFIYFA 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               PV+            P+F +  +A +   AA+ AEI R+G+ +V RGQ E A  LG
Sbjct: 74  LPFVPVI--------GVRLPDFPAAVVAFALNYAAYFAEIFRAGIQSVDRGQYEGAKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++ +  R ++LPQ    IIPP++++ + L+K++SL   +   DL+     I+ +    I
Sbjct: 126 MSYGQTMRRIILPQMWARIIPPVSNETITLVKDTSLIYVLALNDLLRAARGIVQRDF-TI 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              ++    YL +++++      L  + A  +
Sbjct: 185 TPFVVAAGFYLVMTLVLTWIFQYLEKRHAKYD 216



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L    +  +  +G  +   R+S    ++ +   Y+ + R  P ++ + F+
Sbjct: 11  LSAGALVTLKLFVITLALSIPLGLSLALMRISRFPALSRLVGGYIWLMRGTPLMLQMLFI 70

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y ++  V  I       P
Sbjct: 71  YFALPFVPVIGVRLPDFP 88


>gi|77456537|ref|YP_346042.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380540|gb|ABA72053.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 229

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPKLAQGATLTLELVAIAVIAGLLLAIPLG-IARSSKLWYVRALPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF+ +  S++ P     F      ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GLAQFDAVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 120 AIPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T   +EI       YL ++ ++      L   + +
Sbjct: 180 GMARTIIARTYLPVEIFFAAGVFYLVMAYVLVRGFKLLERWLRV 223



 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   ++   +G  R S    V  +   Y+  FR  P LV 
Sbjct: 9   WLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSKLWYVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     + + S+   
Sbjct: 69  LFLVYYGLAQFDAVRNSSMWPY 90


>gi|312897773|ref|ZP_07757189.1| ABC transporter, permease protein [Megasphaera micronuciformis
           F0359]
 gi|310621157|gb|EFQ04701.1| ABC transporter, permease protein [Megasphaera micronuciformis
           F0359]
          Length = 216

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 13/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KIFV + VL + L +    ++R       + L   YI  +L+ G P ++ I   Y 
Sbjct: 16  QVTLKIFVITIVLSLPLGII-MAMARLSPLAVLRKLLEGYI--YLMRGTPLMLQILFIYY 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F+       ++ +  IA     AA+ AEI R G+ ++ RGQ E A  L
Sbjct: 73  ---------GLPFLIPGLRLADYPAAIIAFVLNYAAYFAEIFRGGIQSIDRGQYEGAKVL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++LPQ ++ ++PP+ ++ +NLLK++SL   +   D++ +  +I+ +    
Sbjct: 124 GMTYAQTMRRIVLPQVLKRVLPPVANETINLLKDTSLVYILAMNDVLRITRSIVQRDFDT 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               ++    YL  + ++  F   L  +  + E
Sbjct: 184 -TAFIVAAVFYLVFTFILTRFFMYLEKRFNVYE 215



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 35/75 (46%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+   AI  G   T  +    ++ +  +G ++   RLS   ++  +   Y+ + R  P +
Sbjct: 5   STIVPAIADGLQVTLKIFVITIVLSLPLGIIMAMARLSPLAVLRKLLEGYIYLMRGTPLM 64

Query: 143 VVIFFLYKSVLSVLP 157
           + I F+Y  +  ++P
Sbjct: 65  LQILFIYYGLPFLIP 79


>gi|294498359|ref|YP_003562059.1| putative amino acid ABC transporter permease [Bacillus megaterium
           QM B1551]
 gi|294348296|gb|ADE68625.1| putative amino acid ABC transporter, permease protein [Bacillus
           megaterium QM B1551]
          Length = 241

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 110/218 (50%), Gaps = 7/218 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + S  LG +  LF   + R +     K + ++Y+S   + G P LV + + + 
Sbjct: 21  PLTLTISIISMALGSIFGLFI-AVCRIYKIPLLKQIAVIYVSF--MRGTPLLVQLYVFFY 77

Query: 244 ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +  +     Q   +GG T+SP  +   IA +  T+A+ +E+ RS +  + RGQ EAA
Sbjct: 78  GIPIFIEFLNETQGWHLGGDTISP-LIYALIAYTLNTSAYQSEVFRSSIQTIDRGQFEAA 136

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G+T  +A + ++ PQ++ + IP L + +++L+K +SLA AV   +++++   I N  
Sbjct: 137 YSIGMTTFQAIKRIIFPQSLVAAIPNLGNIFISLIKATSLAFAVKVVEIMAISKVIANDG 196

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + +E+ L+   IY  L          +  K++  E +
Sbjct: 197 YRYLEMYLVASLIYWILCFFFERLFVVIEKKLSYYELR 234



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  ++   M   +I G  +   R+    L+  I  +YV   R  P LV ++  +
Sbjct: 17  LKGVPLTLTISIISMALGSIFGLFIAVCRIYKIPLLKQIAVIYVSFMRGTPLLVQLYVFF 76

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             +   +   + +     G
Sbjct: 77  YGIPIFIEFLNETQGWHLG 95


>gi|194472335|ref|ZP_03078319.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205358365|ref|ZP_02655854.2| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194458699|gb|EDX47538.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205334652|gb|EDZ21416.1| arginine ABC transporter, permease protein ArtQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 239

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F                       + LP + +  F+ FG   
Sbjct: 14  MTVGLAVCALIIGLALAMFFAVWESVKWRPIAWIGSALVTILRGLPEILVVLFIYFGSSQ 73

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + LH     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 74  LLLTLSDGFTLHLGFAQIPVQMEIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 132

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 133 SGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 192

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 193 KSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRFERR 237


>gi|307246527|ref|ZP_07528599.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306852590|gb|EFM84823.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 238

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +++L  +P  D + V            +   +++      F+    + + ++L     
Sbjct: 1   MLENLLLQIPFMDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +   A+  +YIS  +I G P LV I++ +                         
Sbjct: 61  VNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY-----------GLPAIGVYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   + +T+ +  R ++ PQA+R +IPPL
Sbjct: 108 AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTICMTYMQTFRRIIAPQAIRVVIPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++ L   +
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAK 227

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 228 LERRFNR 234


>gi|152969452|ref|YP_001334561.1| arginine transporter permease subunit ArtQ [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206578434|ref|YP_002239487.1| arginine ABC transporter, permease protein ArtQ [Klebsiella
           pneumoniae 342]
 gi|238893923|ref|YP_002918657.1| arginine transporter permease subunit ArtQ [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288936335|ref|YP_003440394.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510609|ref|ZP_06549979.1| arginine transport system permease [Klebsiella sp. 1_1_55]
 gi|329998470|ref|ZP_08303107.1| arginine ABC transporter permease protein ArtQ [Klebsiella sp. MS
           92-3]
 gi|150954301|gb|ABR76331.1| arginine 3rd transport system permease protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206567492|gb|ACI09268.1| arginine ABC transporter, permease protein ArtQ [Klebsiella
           pneumoniae 342]
 gi|238546239|dbj|BAH62590.1| arginine 3rd transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891044|gb|ADC59362.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777325|gb|EFD85323.1| arginine transport system permease [Klebsiella sp. 1_1_55]
 gi|328538660|gb|EGF64756.1| arginine ABC transporter permease protein ArtQ [Klebsiella sp. MS
           92-3]
          Length = 238

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEK----------TGKALPLLYISTFLIFGLPT 234
               + V + V+G+VL++    L                   + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALVIGLVLAMLFAVLESVKWRPVAWLATGIVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + +      +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTIPLGFTQIPVQMQIENFDVSP-FLCGAIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 QGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFNWYIIAAAIYLVITLLSQYILKRIDQRATRFERR 236


>gi|23098460|ref|NP_691926.1| glutamine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776686|dbj|BAC12961.1| glutamine ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 224

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 13/230 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
            +L F  F     L      +     I +   ++G VL      L R    K    L  +
Sbjct: 6   RILEFDWFRVFEFLPELGKGLYYTLLISIVGLLIGFVLG-AIFGLGRISKNKFLFVLASI 64

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   ++ G P LV       + F  P++ Q+NF          ++  I ++  + A+IA
Sbjct: 65  YVE--VVRGTPVLVQ---AIWIFFALPIIIQYNF-------DPIVAGIIVIAINSGAYIA 112

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VR  + ++ +GQ+EA  +LGLT  +  R ++ PQA + +IPPL +Q++  +K++SL  
Sbjct: 113 EVVRGSVDSIDKGQIEAGRSLGLTKNQTMRYIIWPQAFKRMIPPLGNQFIISIKDTSLLS 172

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   +L+  G  I++    A+EI       YL++++ ++L +  +  ++
Sbjct: 173 VILVPELMFQGRLIVSNQFIAVEIYTAVALFYLAITLTLSLILRLIERRL 222



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 76/189 (40%), Gaps = 3/189 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++  G++   ++G + G GR+S NK +  +  +YVEV R  P LV   ++
Sbjct: 22  LGKGLYYTLLISIVGLLIGFVLGAIFGLGRISKNKFLFVLASIYVEVVRGTPVLVQAIWI 81

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  ++      IV    +   N G     +   +   I       G  L L   +  
Sbjct: 82  FFALPIIIQYNFDPIVAGIIVIAINSGAYIAEVVRGSVDSIDKGQIEAGRSLGLTKNQTM 141

Query: 209 RH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           R+  + +   + +P L     +     +L+ + L  +L F   ++    FI    +    
Sbjct: 142 RYIIWPQAFKRMIPPLGNQFIISIKDTSLLSVILVPELMFQGRLIVSNQFI-AVEIYTAV 200

Query: 267 MSLYIALSC 275
              Y+A++ 
Sbjct: 201 ALFYLAITL 209


>gi|15672920|ref|NP_267094.1| amino acid ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|12723874|gb|AAK05036.1|AE006328_4 amino acid ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406481|gb|ADZ63552.1| polar amino acid transport system permease protein [Lactococcus
           lactis subsp. lactis CV56]
          Length = 295

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 6/249 (2%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             ++    +        F      S          K+   S  + I+  +F   L     
Sbjct: 25  FLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFLPIIKMIPSSLEMTIIAMVFGLLLGLILA 84

Query: 213 EKTGKALPLLYISTFL----IFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266
                 +P+L     L    I G P LV + L Y       K +   +         P  
Sbjct: 85  LVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNFNVNTIPAM 144

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           + + +A +    A+ +E +R+ + +V +GQ+EAA +LG+T+ +    V LP+A      P
Sbjct: 145 LFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAP 204

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + LLK++SLA   G  ++ +    I   T +  E  L    +Y  + I+  L + 
Sbjct: 205 LGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVYWPICIIFELLIR 264

Query: 387 RLNAKIALK 395
            L  K+ ++
Sbjct: 265 GLERKLDVR 273


>gi|217958227|ref|YP_002336773.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|228983842|ref|ZP_04144037.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229137441|ref|ZP_04266052.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
 gi|229154343|ref|ZP_04282463.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 4342]
 gi|217065677|gb|ACJ79927.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|228629167|gb|EEK85874.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 4342]
 gi|228645999|gb|EEL02222.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
 gi|228775891|gb|EEM24262.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 218

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 118/220 (53%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L ++   ++  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWLGAAIVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTAAFIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVV--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 115 KGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGMDLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ W+    VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWLGAAIVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|148558506|ref|YP_001257650.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148369791|gb|ABQ62663.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
          Length = 226

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G+ LSL  T L R F      ++   Y+  F   G P LV + 
Sbjct: 17  WAGLIFTIPLTLLSFTFGLALSLL-TALVRLFAPVWLSSVARFYVWIF--RGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                       F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  VIFY-----------GLPSIGIYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R+ +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    IYL+LS +++    RL  +    
Sbjct: 183 TYEPLILYIEAALIYLALSSILSALQVRLERRFGRY 218



 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 35/91 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +  L    RL A   ++ + R YV +FR  P 
Sbjct: 9   ADSLPTLLWAGLIFTIPLTLLSFTFGLALSLLTALVRLFAPVWLSSVARFYVWIFRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 69  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 99


>gi|218706885|ref|YP_002414404.1| amino-acid ABC transporter membrane protein [Escherichia coli
           UMN026]
 gi|293406872|ref|ZP_06650798.1| polar amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|298382613|ref|ZP_06992210.1| general L-amino acid transport system permease [Escherichia coli
           FVEC1302]
 gi|218433982|emb|CAR14899.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|291426878|gb|EFE99910.1| polar amino acid ABC transporter [Escherichia coli FVEC1412]
 gi|298277753|gb|EFI19269.1| general L-amino acid transport system permease [Escherichia coli
           FVEC1302]
          Length = 367

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPNRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|226313305|ref|YP_002773199.1| arginine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226096253|dbj|BAH44695.1| arginine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 219

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+       V  F  G +L+L      +  + K    L + Y S F   
Sbjct: 11  YIPFILEGIKGTLLVTLISVVLGFFWGSILALI-----KISNVKLLNWLAVAYTSVF--R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ +   Y   F  P L  +N         +  +  +  +  + A+I+E +R G++
Sbjct: 64  GTPLILQLTFVY---FATPQLTGYNI-------SQLEAAVLTFTLNSGAYISETIRGGIL 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EAA ALG+ + +    ++LPQA+++I+P L ++ + LLK S+L   +G AD++
Sbjct: 114 AVDKGQWEAAKALGVPYHRMMLDIILPQAVKNILPALVNETIALLKESALVSTIGLADIM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +     +  E  ++   +Y  + +++      L  ++ L +
Sbjct: 174 QNANVVKGTIFRYFEPYMMAGILYYVMVMILTWVARVLERRMRLSD 219



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     Y   IL G   T  +    ++     G+++   ++S  KL+ W+   Y  VF
Sbjct: 3   LDFAQIVPYIPFILEGIKGTLLVTLISVVLGFFWGSILALIKISNVKLLNWLAVAYTSVF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ + F+Y +   +
Sbjct: 63  RGTPLILQLTFVYFATPQL 81


>gi|52784239|ref|YP_090068.1| YckJ [Bacillus licheniformis ATCC 14580]
 gi|163119223|ref|YP_077658.2| ABC transporter permease YckJ [Bacillus licheniformis ATCC 14580]
 gi|319648833|ref|ZP_08003044.1| YckJ protein [Bacillus sp. BT1B_CT2]
 gi|52346741|gb|AAU39375.1| YckJ [Bacillus licheniformis ATCC 14580]
 gi|145902729|gb|AAU22020.2| ABC transporter permease protein YckJ [Bacillus licheniformis ATCC
           14580]
 gi|317389252|gb|EFV70068.1| YckJ protein [Bacillus sp. BT1B_CT2]
          Length = 234

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 15/245 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +                  +           +  +  + + SF+ G++++L  T L+R  
Sbjct: 1   MFLSNIQAAAIGQAIPWDLVRESFWPIFLRGIYYSIPLAILSFIFGMIIALI-TALARMS 59

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +  +A+  +Y+S   I G P LV + + + L           F         F S  I
Sbjct: 60  KSRILRAVFGIYVSA--IRGTPLLVQLFIIFYL-----------FPAFQVTIDPFPSAII 106

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A S    A+ +EI+R+ +++VP+GQ EAA ++G+T + A   V+LPQA+R  IPPL++ +
Sbjct: 107 AFSLNVGAYASEIIRASILSVPKGQWEAAYSIGMTQKTALTRVILPQAVRVSIPPLSNTF 166

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++L+K++SLA  +  A+L      I      Q + I +   FIY  +  ++AL   ++  
Sbjct: 167 ISLVKDTSLASQILVAELFRKAQEIGAGNLDQILIIYMEAAFIYWIICFVLALVQQQIER 226

Query: 391 KIALK 395
           ++   
Sbjct: 227 RLDRY 231



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 40/110 (36%)

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           FLS      I Q I       S+    L G   +  LA    I   II  +    R+S +
Sbjct: 2   FLSNIQAAAIGQAIPWDLVRESFWPIFLRGIYYSIPLAILSFIFGMIIALITALARMSKS 61

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +++  +  +YV   R  P LV +F ++    +     D          LN
Sbjct: 62  RILRAVFGIYVSAIRGTPLLVQLFIIFYLFPAFQVTIDPFPSAIIAFSLN 111


>gi|229588842|ref|YP_002870961.1| histidine ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229360708|emb|CAY47566.1| histidine ABC transport system, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 242

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S  + ++L L     ++    +  +    LY  T LI G+P LVL+ L + 
Sbjct: 28  WMTIKLSVLSLAVSVLLGLLGAS-AKLSSLRLLRIPAQLY--TTLIRGVPDLVLMLLIFY 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F +  I L     A+  E  R  ++AVPRGQ+EAA A 
Sbjct: 85  SLQTWLTGLTDFMEWEYIEIDPFSAGVITLGFIYGAYFTETFRGAILAVPRGQLEAATAY 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V  PQ MR  +P + + ++ +LK ++L   +G ADLV         T Q 
Sbjct: 145 GLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQL 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++   IYL ++      + RL  + +   ++
Sbjct: 205 FYFLVLAALIYLLITSASNFVLRRLERRYSAGSRE 239



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 40/83 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L+   +  + ++G L  + +LS+ +L+    ++Y  + R +P LV+
Sbjct: 19  FGPLLLQGTWMTIKLSVLSLAVSVLLGLLGASAKLSSLRLLRIPAQLYTTLIRGVPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L      +   +
Sbjct: 79  MLLIFYSLQTWLTGLTDFMEWEY 101


>gi|257460118|ref|ZP_05625222.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Campylobacter gracilis RM3268]
 gi|257442559|gb|EEV17698.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Campylobacter gracilis RM3268]
          Length = 222

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 108/211 (51%), Gaps = 14/211 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + SF+LG+VL++  T ++R  + K  K L  +YI  F   G P LV + + Y 
Sbjct: 24  QVTIPLTIISFLLGLVLAVL-TAVARIANFKILKQLSEIYIWIF--RGTPLLVQLFIVY- 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F  P++              + +  I  S    A+ +E VR+ +++VP+GQ EAA +L
Sbjct: 80  --FGLPIV--------GITLDVWAAAIITFSLNIGAYASEAVRAAILSVPKGQWEAATSL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ +  R ++ PQA R  +PPL++ +++ LK++SL  ++   D+  V   I  +    
Sbjct: 130 GMSYAQILRRIIAPQAARISLPPLSNIFISTLKDTSLVASITMVDMFMVAQRIAARAFDP 189

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + + ++    YL++  ++    ++L  + + 
Sbjct: 190 LTLYVLAALFYLAVCTLLTFLQSKLERRFSR 220



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L     +   ++  L    R++  K++  +  +Y+ +FR  P LV +F +Y  +
Sbjct: 23  LQVTIPLTIISFLLGLVLAVLTAVARIANFKILKQLSEIYIWIFRGTPLLVQLFIVYFGL 82

Query: 153 LSVLPIPDHSIVLPFGMFLN 172
             V    D          LN
Sbjct: 83  PIVGITLDVWAAAIITFSLN 102


>gi|326315178|ref|YP_004232850.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323372014|gb|ADX44283.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 260

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + S   G+VL   A  L+R       + +   YI  ++I G P LV I   Y  
Sbjct: 58  TTLWLTLVSGFCGLVLGTGA-ALARTARWTPLRWVSRFYI--WVIRGTPLLVQILFVY-- 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PVL            P+F +  +AL     A+ +E +R+GL+AVPRGQ EAA ALG
Sbjct: 113 -FALPVLVP------GLNLPDFAAAVVALGLNVGAYNSEAIRAGLLAVPRGQTEAARALG 165

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       V+ PQA +  +PPL S ++ LLK+SSLA A+G  +L +VG  I + T Q I
Sbjct: 166 LSRTHVFFDVVFPQAFKISLPPLVSNFVALLKDSSLAYAIGVVELTNVGNRIQSATFQPI 225

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +      YL L+ ++    N +  +  ++ +
Sbjct: 226 ATLSTVAITYLLLTTLVTQVSNAIEHRFDVEGR 258



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 32/78 (41%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                 A A   G   T WL         ++GT     R +    + W+ R Y+ V R  
Sbjct: 43  DPIGPNAQAFADGARTTLWLTLVSGFCGLVLGTGAALARTARWTPLRWVSRFYIWVIRGT 102

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV I F+Y ++  ++P
Sbjct: 103 PLLVQILFVYFALPVLVP 120


>gi|238919597|ref|YP_002933112.1| L-cystine transport system permease protein TcyB [Edwardsiella
           ictaluri 93-146]
 gi|238869166|gb|ACR68877.1| L-cystine transport system permease protein TcyB [Edwardsiella
           ictaluri 93-146]
          Length = 232

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                +  +  +  + + SF  G+++ L AT L R +  +  +     YI  F   G P 
Sbjct: 25  FWPLLSAALRFSLPLALLSFCGGLLVGL-ATALIRLYAIRPLRLCADFYIWVF--RGTPL 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L +                       F +  I  +    A+ +EIVR  +++VP+
Sbjct: 82  LVQLFLIFY-----------GLPSAGITLDAFPAALIGFTLNVGAYSSEIVRGAILSVPQ 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A+G++  +A R V+LPQ+    +PPL++ +++L+K++SLA  +   ++     
Sbjct: 131 GQWEAASAIGMSSSQAMRRVILPQSAFVSLPPLSNVFISLIKDTSLAAVITVPEMFLAAQ 190

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I+    + + I      IYL+ S ++     RL       E
Sbjct: 191 RIVAVNYEPLIIYSETALIYLAFSTLLGKLQLRLERYYRRYE 232



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 32/91 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++   +      +  LA        ++G      RL A + +      Y+ VFR  P 
Sbjct: 22  ADAFWPLLSAALRFSLPLALLSFCGGLLVGLATALIRLYAIRPLRLCADFYIWVFRGTPL 81

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S     D       G  LN
Sbjct: 82  LVQLFLIFYGLPSAGITLDAFPAALIGFTLN 112


>gi|302024590|ref|ZP_07249801.1| amino-acid ABC transporter permease protein [Streptococcus suis
           05HAS68]
          Length = 219

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF  G+++++  T L +       K +   YI  +++ G P LV +   Y +
Sbjct: 23  VTIPLTILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L          V   F S  +  S  T A+ AE +R+ + +VP+GQ+EA  ++G
Sbjct: 77  FFGLPSL--------GIVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R ++LPQA R   PPL++  + L+K++SLA  +   ++      I  +T +  
Sbjct: 129 MSFAQTMRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +      +YL  S ++         K+A+ 
Sbjct: 189 ALYCEVALVYLLFSTILTKLQAYGEKKLAVY 219



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S++  ++ G + T  L         +I       +++   ++  + R Y+ V R  P L
Sbjct: 11  DSFSQILVPGLLVTIPLTILSFTFGLLIAIGTALVQIAQIPILKQVARFYIWVVRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V ++ ++  + S+  + D          +N
Sbjct: 71  VQLYVIFFGLPSLGIVLDAFPSAVLVFSVN 100


>gi|253574816|ref|ZP_04852156.1| L-cystine ABC transporter, permease [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251845862|gb|EES73870.1| L-cystine ABC transporter, permease [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 214

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 14/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L F          + V S   G+++ L    ++R       + +  +Y+S  +I G 
Sbjct: 5   WDNLPFLLKGAYYTLLVTVVSMFFGLIIGLVV-AIARLKGNWLVRGIARVYVS--VIRGT 61

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y    D           G T+ P   + Y+ALS    A+++E  R  + ++
Sbjct: 62  PLLVQIFIVYYGVVDY----------GITLGP-LTAAYVALSINVGAYLSETFRGAIQSI 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA A G+T     R ++LPQA R  I P+ + ++ +LK ++L  A+   +L+  
Sbjct: 111 PKGQTEAAYATGMTGWMTMRRIILPQAARVAIAPMGNTFIGMLKETALVSAITVTELLRS 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +I Q    +   +    +Y  +S + +  +N +  +++
Sbjct: 171 AQLLIAQYYVYMPFFVGIAAMYWIMSTVFSAILNAVEKQLS 211



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L G   T  +    M    IIG +V   RL  N LV  I RVYV V R  P L
Sbjct: 5   WDNLPFLLKGAYYTLLVTVVSMFFGLIIGLVVAIARLKGNWLVRGIARVYVSVIRGTPLL 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V IF +Y  V+               + +N
Sbjct: 65  VQIFIVYYGVVDYGITLGPLTAAYVALSIN 94


>gi|158424906|ref|YP_001526198.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331795|dbj|BAF89280.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 217

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 17/234 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F +            T+  +A  FV   ++G +++L     +R       + + + Y
Sbjct: 1   MPTFTLTHFEFLCWAALWTVGLSAIAFVGGGIVGFLVAL-----ARVSPSPVVRGIAIGY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I             I     L     +      I G    P  +S  + L+ Y + F+AE
Sbjct: 56  I------------QIVQGTPLLILLFLFYFGIAIVGFKEVPAILSAGLGLTIYASGFLAE 103

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  + +VP+ Q EAA  L L+  +    V+LPQAMR    P     + ++KN+SLA  
Sbjct: 104 IWRGCIESVPKTQWEAAECLSLSRWQRMTKVVLPQAMRIATAPTVGFLVQIVKNTSLASV 163

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           VGF +L   G  + N   +   I ++   IY  L   ++ +   L  K+ +  +
Sbjct: 164 VGFIELSQAGKLVNNSIFEPFTIFIVVASIYFVLCYPLSTWSRSLERKLNVGRR 217



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++   +    + T  L+    +   I+G LV   R+S + +V  I   Y+++ +  P
Sbjct: 7   THFEFLCWAALWTVGLSAIAFVGGGIVGFLVALARVSPSPVVRGIAIGYIQIVQGTP 63


>gi|149007236|ref|ZP_01830900.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|221231612|ref|YP_002510764.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854330|ref|YP_002735842.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|298230612|ref|ZP_06964293.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298254377|ref|ZP_06977963.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298503171|ref|YP_003725111.1| amino acid ABC superfamily transporter permease [Streptococcus
           pneumoniae TCH8431/19A]
 gi|147761274|gb|EDK68241.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|220674072|emb|CAR68587.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225723507|gb|ACO19360.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|298238766|gb|ADI69897.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 227

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 7   PKYLPYFNYGAVVTILISICVIFLGTILGVVL-AFGQRSKFKPLVWLANLYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHINAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRLKNAMRYVILPQAVKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 182 ATTVSTTTYLPLTPLLFAAFYYLIMTSILTVALKAFEKHMGQGDKK 227



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 9   YLPYFNYGAVVTILISICVIFLGTILGVVLAFGQRSKFKPLVWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|34498541|ref|NP_902756.1| histidine transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34104397|gb|AAQ60755.1| histidine transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 228

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 7/211 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V S  LG+V +LF     +  H +    L   Y  + ++ G+P LV + L +     
Sbjct: 22  TALVVSVALGLVGALF-----KSSHSRPLTLLAEFY--STVVRGVPDLVWMFLLFFGAQM 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                   F   S     F +    L     A++ E  R  ++AV +GQMEA +A G+T 
Sbjct: 75  ALNDLCGYFGWQSPDIDPFAAGVATLGFIFGAYMTETFRGAMMAVHKGQMEAGLAYGMTP 134

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    + LPQ +R  +P  ++ +L L+K+++L   +G  D++       + T Q  ++ 
Sbjct: 135 LRVFFRIQLPQMVRYALPSFSNNWLVLVKSTALVSVIGLNDVMYRADAAKSATQQPFDVY 194

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++   ++L ++ +  L ++ L  + ++  K+
Sbjct: 195 IVVGALFLVVTGVSNLLLHWLEKRYSMGTKE 225



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G V T  LA + ++ +  +G +    + S ++ +  +   Y  V R +P LV 
Sbjct: 5   YLPSILEGGVLTLKLAGTALVVSVALGLVGALFKSSHSRPLTLLAEFYSTVVRGVPDLVW 64

Query: 145 IFFLYKS 151
           +F L+  
Sbjct: 65  MFLLFFG 71


>gi|254555900|ref|YP_003062317.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|254044827|gb|ACT61620.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
          Length = 213

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 18/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
              +  +     T+ ++    VFS ++G + ++F    SR     T + +  +YI  F  
Sbjct: 7   HYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P LV+    Y +                T    F +  I L+ YT++FIAE VR+G+
Sbjct: 60  RNIPLLVIAMFFYVI-----------IPMYVTKIDGFTAGTIGLTIYTSSFIAETVRAGI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQME A A G+T+ +A   ++LPQA + IIPPL +Q++NL+KNSS+   V   DL
Sbjct: 109 QSVDPGQMEGARANGMTYWQAMSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGFDL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    +I + +   I   ++    YL +++ ++ +M  L  K+A
Sbjct: 169 MYQANSIASLSLDTINSYVVVGVFYLIITLPLSYYMRHLEKKLA 212



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 43/92 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + ++ G   T   +   ++ +TIIGT+     +  ++ +  I RVY+E+FRNIP LV+
Sbjct: 8   YWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLLVI 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
             F Y  +   +   D       G+ +     
Sbjct: 68  AMFFYVIIPMYVTKIDGFTAGTIGLTIYTSSF 99


>gi|219668329|ref|YP_002458764.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219538589|gb|ACL20328.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 252

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 18/193 (9%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ---LHFDKPVLGQFNFIGG 259
              R  +    K   AL   YI  F   G P +V   + Y    L FD  +   F     
Sbjct: 50  MPERGIKRILLKVVNALLASYIEFF--RGTPMIVQAMVIYYGSALAFDIHMNHIF----- 102

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                   +    +S  T A++AEIVR G+I++ +GQ EAA A+G+ H +    V+LPQ 
Sbjct: 103 --------AGIFIVSINTGAYMAEIVRGGIISIDKGQFEAAHAIGMNHIQTMFNVVLPQV 154

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R+I+P   ++++  +K++S+   +   +L     +I     +  E   +   +Y  ++ 
Sbjct: 155 IRNILPATGNEFVINIKDTSVLNVISVTELYFQTKSIAGNNFRYFEAFFVACILYFIMTF 214

Query: 380 MIALFMNRLNAKI 392
            +   +  +  ++
Sbjct: 215 TVTRILRYIERRM 227


>gi|161524853|ref|YP_001579865.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189350397|ref|YP_001946025.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221213037|ref|ZP_03586013.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD1]
 gi|160342282|gb|ABX15368.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189334419|dbj|BAG43489.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221167250|gb|EED99720.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia multivorans CGD1]
          Length = 230

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  +VL++   R                  L   Y+S  L+ G P LV I +
Sbjct: 26  VLSMVFGLLGAVVLAMMGIRQGEPLEGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 83

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 84  IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 133 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEMIAAT 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    IY  L  ++         +++L  + 
Sbjct: 193 YQPLPLYLAAAAIYWVLCQILEWVQRWYEKRLSLPARH 230


>gi|283768561|ref|ZP_06341473.1| ABC transporter, permease protein [Bulleidia extructa W1219]
 gi|283104953|gb|EFC06325.1| ABC transporter, permease protein [Bulleidia extructa W1219]
          Length = 224

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 102/231 (44%), Gaps = 14/231 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +           +     +   SF  G+++++ A   +   + K      L+ I  +
Sbjct: 6   WNIVATSFWPILKAGLTMTLPLAFLSFFFGLIIAVLA---ALVQYAKIPVVKKLVRIYVW 62

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G P LV + + +   +  PV+           S  F++  +  S    A+++E +R 
Sbjct: 63  LIRGTPLLVQLMIIF---YGLPVI--------GIQSNPFVAATVGFSICEGAYMSEAIRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L ++PRGQ EA   +G+   +    ++LPQA R+  P L++  ++L+K+SSLA  +   
Sbjct: 112 ALESIPRGQSEAGYCVGMNFVQVMWYIVLPQAFRTAFPALSNSLISLVKDSSLAANITVV 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++         +    + + +    +YL    +I  F +R+  K++  E+K
Sbjct: 172 EMFMTTQRFAGKFYTFMPLYIEVALVYLLFCTIITFFQSRIEKKLSRYERK 222



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 34/94 (36%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+   +  G   T  LAF       II  L    + +   +V  + R+YV + R  P LV
Sbjct: 12  SFWPILKAGLTMTLPLAFLSFFFGLIIAVLAALVQYAKIPVVKKLVRIYVWLIRGTPLLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            +  ++  +  +    +  +    G  +      
Sbjct: 72  QLMIIFYGLPVIGIQSNPFVAATVGFSICEGAYM 105


>gi|256830136|ref|YP_003158864.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256579312|gb|ACU90448.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 226

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 15/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +    +       +    F   + ++    +L+R F     + L  LY+   L+ G P 
Sbjct: 15  PMLMRGVWYTIYLTVGGLFFGFLLGVATGLMKLARPFLV---RKLADLYVE--LVRGTPM 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV       L++  P+             P  ++  I ++  + A+IAEIVR  + ++  
Sbjct: 70  LVQAMF---LYYGVPMAVGLRI-------PPLIAGVIVIAINSGAYIAEIVRGAIQSINV 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA  ++GLT  +  R ++ PQA + +IPPL +Q++  LK++SL + +G  +L+  G 
Sbjct: 120 GQTEAGRSIGLTRAQTMRYIIWPQAFKRMIPPLGNQFIISLKDTSLLMVIGVGELLRTGQ 179

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I+    +A E+ +    +YL +++ IA  +  L  ++
Sbjct: 180 EIVAVNFRAFEVYMAVAMVYLVMTMSIAKALKILETRL 217



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 2/153 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T +L   G+    ++G   G  +L+   LV  +  +YVE+ R  P LV   FL
Sbjct: 17  LMRGVWYTIYLTVGGLFFGFLLGVATGLMKLARPFLVRKLADLYVELVRGTPMLVQAMFL 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  V   + +    ++    +   N G     +       I V     G  + L   +  
Sbjct: 77  YYGVPMAVGLRIPPLIAGVIVIAINSGAYIAEIVRGAIQSINVGQTEAGRSIGLTRAQTM 136

Query: 209 RH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           R+  + +   + +P L     +     +L+++ 
Sbjct: 137 RYIIWPQAFKRMIPPLGNQFIISLKDTSLLMVI 169


>gi|187732498|ref|YP_001880941.1| arginine transporter permease subunit ArtQ [Shigella boydii CDC
           3083-94]
 gi|187429490|gb|ACD08764.1| arginine ABC transporter, permease protein ArtQ [Shigella boydii
           CDC 3083-94]
 gi|320175302|gb|EFW50408.1| Arginine ABC transporter, permease protein ArtQ [Shigella
           dysenteriae CDC 74-1112]
 gi|320183198|gb|EFW58056.1| Arginine ABC transporter, permease protein ArtQ [Shigella flexneri
           CDC 796-83]
 gi|332097215|gb|EGJ02198.1| arginine transport system permease protein artQ [Shigella boydii
           3594-74]
          Length = 238

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESEKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|330430187|gb|AEC21521.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Pusillimonas sp. T7-7]
          Length = 220

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 13/213 (6%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
              IF FS + G +L  F   + R    +  +    +Y+S  ++ G P LV + + Y   
Sbjct: 20  YTLIFAFSAMFGGLLVGFVLAVLRIIPSRWTQIPATVYVS--MMRGTPLLVQVFIIYY-- 75

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                                 +  +ALS    A+I+E +R  ++ + RGQ  A  +LGL
Sbjct: 76  ---------GLPSIGISFDPLTAGVLALSLNAGAYISESLRGAIVGISRGQWSAGYSLGL 126

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            + +    V++PQA+R  +P +++  ++L+K++SL   +   +L+     +I  T Q + 
Sbjct: 127 NYWQNLHYVVMPQALRLAVPSMSNSLISLIKDTSLVSVITVTELLLATKDVIATTFQPLP 186

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + L    IY  LS+ +     RL        + 
Sbjct: 187 LYLAAAGIYWILSLCLEQVQARLEKHYGRSARH 219



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T   AFS M    ++G ++   R+  ++       VYV + R  P LV +F +
Sbjct: 14  LLKGTGYTLIFAFSAMFGGLLVGFVLAVLRIIPSRWTQIPATVYVSMMRGTPLLVQVFII 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  + S+    D        + LN
Sbjct: 74  YYGLPSIGISFDPLTAGVLALSLN 97


>gi|309785599|ref|ZP_07680230.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella dysenteriae 1617]
 gi|308926719|gb|EFP72195.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella dysenteriae 1617]
          Length = 155

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/140 (33%), Positives = 75/140 (53%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPD 160
           PL+ IFF Y +VL  LP P 
Sbjct: 136 PLLQIFFWYFAVLRNLPGPR 155


>gi|261823280|ref|YP_003261386.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607293|gb|ACX89779.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 244

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 106/213 (49%), Gaps = 13/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V S  LG  L+L    L +       +++   Y+  F   G P LV + L Y 
Sbjct: 18  PLTLQLAVSSVFLGFFLALGL-ALMQLSSFAVLRSIARTYVLFF--RGTPLLVQLFLIYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF ++  S + P          ++LS  T A+ +EI+R GL +VP GQ+E+
Sbjct: 75  ------GLGQFPWVRESMLWPFLREPHWCALLSLSLCTGAYASEIIRGGLQSVPVGQIES 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A G+      + ++ P A+R  +P   ++ ++++K++SLA  +   ++  +   +I +
Sbjct: 129 ARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKSTSLASIITLMEITGIAARLIAE 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T +A+E+ L+   IYL +++++   +     ++
Sbjct: 189 TYRALEVFLVAGAIYLFINLILTRLLMWTEFRL 221



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 3/101 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  LA S +     +   +   +LS+  ++  I R YV  FR  P LV +F +
Sbjct: 13  IIPGIPLTLQLAVSSVFLGFFLALGLALMQLSSFAVLRSIARTYVLFFRGTPLLVQLFLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  +      P     + +         +  +L++ T A  
Sbjct: 73  YYGLGQ---FPWVRESMLWPFLREPHWCALLSLSLCTGAYA 110


>gi|242279379|ref|YP_002991508.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242122273|gb|ACS79969.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 269

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 19/241 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
                +P     L  G F+    L    +T++     FV +F++G+  ++      R   
Sbjct: 45  WQWFRVPGFFFSLNEGKFIPGPLLEGLGVTLEITGLSFVLTFIIGLGTAIM-----RLSG 99

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
             T KA+  +Y+   +I   P L+ +   Y +      +              F +  IA
Sbjct: 100 SFTAKAIARIYLE--IIRNTPLLIQLFFIYFVAAPIIGING------------FWASVIA 145

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS +  A+ +EI R+G+ ++ RGQ EAA +LG   + A   V+LPQA+  I PPL  Q +
Sbjct: 146 LSLFEGAYASEIFRAGITSIDRGQWEAAFSLGGDKKFAYINVILPQAVPRIAPPLAGQAI 205

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+K+S+L   V   DL   G +II++T    EI  I   +YLS++++++  +++   K 
Sbjct: 206 ALVKDSALVSTVAIYDLTMQGQSIISETFLTFEIWFIVAAVYLSITLLLSWVLDKTARKF 265

Query: 393 A 393
            
Sbjct: 266 K 266



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 34/77 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +     +   IIG      RLS +     I R+Y+E+ RN P L+ +FF+
Sbjct: 67  LLEGLGVTLEITGLSFVLTFIIGLGTAIMRLSGSFTAKAIARIYLEIIRNTPLLIQLFFI 126

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y     ++ I      +
Sbjct: 127 YFVAAPIIGINGFWASV 143


>gi|89099965|ref|ZP_01172836.1| amino acid ABC transporter, permease protein [Bacillus sp. NRRL
           B-14911]
 gi|89085357|gb|EAR64487.1| amino acid ABC transporter, permease protein [Bacillus sp. NRRL
           B-14911]
          Length = 214

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +   A I V   + G ++ L  T L R       + + + +I+  L+ G P L
Sbjct: 8   LPVLWAGLKLTAYITVLGLLFGFIIGLI-TALFRLSPIPPLRWIAIWFIN--LVRGTPFL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y            N +   ++ P   +  + ++    A+IAEI+R+G+ ++ +G
Sbjct: 65  VQLFFIYF---------GLNSLSFISLEP-VTAGIVGVAINAGAYIAEIIRAGIQSIDKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  LGLT  +  R ++LPQA+R ++P   +Q +  LK++SL   +G A+L   G  
Sbjct: 115 QTEAARTLGLTSTQTMRYIILPQALRRMLPTFVNQAIISLKDTSLLSVIGIAELTQRGQV 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++ T +  +I  +   +Y  L  ++    + +  +  L+
Sbjct: 175 VVSATYEPFKIWGMVALMYFILIYLLTKLGDFIERRYQLR 214



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G   T ++   G++   IIG +    RLS    + WI   ++ + R  P LV +FF
Sbjct: 10  VLWAGLKLTAYITVLGLLFGFIIGLITALFRLSPIPPLRWIAIWFINLVRGTPFLVQLFF 69

Query: 148 LYKSV 152
           +Y  +
Sbjct: 70  IYFGL 74


>gi|281491440|ref|YP_003353420.1| amino acid ABC transporter permease [Lactococcus lactis subsp.
           lactis KF147]
 gi|281375158|gb|ADA64671.1| Amino acid ABC transporter, permease protein [Lactococcus lactis
           subsp. lactis KF147]
          Length = 295

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 6/249 (2%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             ++    +        F      S          K+   S  + I+  +F   L     
Sbjct: 25  FLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFLPIIKMIPSSLEMTIIAMVFGLLLGLILA 84

Query: 213 EKTGKALPLLYISTFL----IFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266
                 +P+L     L    I G P LV + L Y       K +   +         P  
Sbjct: 85  LVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNFNVNTIPAM 144

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           + + +A +    A+ +E +R+ + +V +GQ+EAA +LG+T+ +    V LP+A      P
Sbjct: 145 LFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLPEAATVATAP 204

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + LLK++SLA   G  ++ +    I   T +  E  L    +Y  + I+  L + 
Sbjct: 205 LGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVYWPICIIFELLIR 264

Query: 387 RLNAKIALK 395
            L  K+ ++
Sbjct: 265 GLERKLDVR 273


>gi|332041199|gb|EGI77564.1| amino acid ABC transporter [Hylemonella gracilis ATCC 19624]
          Length = 250

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 9/187 (4%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF--- 266
            +  K  + L + Y++ F   G P  V I L +       V  +   +    ++ EF   
Sbjct: 58  RWALKPVQWLAVAYVTFF--RGTPLFVQILLVHFALMPTLVHSEHGLLLTGPLASEFRQN 115

Query: 267 ----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                S  +ALS    A+I+EI R+G+ ++ +GQ +AA +LG TH ++ R V++PQA R 
Sbjct: 116 YGAFFSGAVALSLNAGAYISEIFRAGIQSIHQGQTQAAYSLGFTHAQSMRYVVVPQAARR 175

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PPL ++ + LLK+SSL  A+G ADL     T+     +  E  L    +YL ++++++
Sbjct: 176 MVPPLVNEAIMLLKDSSLVSAIGLADLALAARTVAGAYSRYWEPYLAISALYLVMTLLLS 235

Query: 383 LFMNRLN 389
           L   RL 
Sbjct: 236 LAAKRLE 242


>gi|163800522|ref|ZP_02194423.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175965|gb|EDP60759.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 306

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 17/293 (5%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           G  +    L    L+A      V ++      V   + +K    +L  P     LP+   
Sbjct: 17  GFSINRFNLLDWVLLAICALAGVWLYYRSTVGVNYIWHWKEATELLFTPRADGGLPY--- 73

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLY 223
                      T+  +     F+ VLG +L L     S+         +       PL++
Sbjct: 74  ----FFQGLISTLRLSVWGITFALVLGTLLGLARFSDSKWLRTPANAFIQLVRNIPPLVF 129

Query: 224 ISTFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +  F  F    L+ +     +   +  +P   Q  F G + +     S    +   +AA+
Sbjct: 130 VFIFYFFVSNQLIPLLGLDDILRNYRGEPNAIQHFFFGPANLWENLASGVFCIGLLSAAY 189

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR+GL  + +GQ EAA +LGL+     R ++ PQ +++I P L  Q ++L+K++S+
Sbjct: 190 VAEVVRAGLQGIDKGQWEAADSLGLSLWVKYRFIIAPQVLKAITPALAGQTISLVKDTSI 249

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +   ++  VG  + N +G   EI LI  F+Y  +   +++    +  K A
Sbjct: 250 VSLISIQEMTFVGTEMANSSGYIFEIWLIVGFVYFLICFGLSMVFRYIEKKSA 302



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 1/123 (0%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
               G ++T  L+  G+  A ++GTL+G  R S +K +      ++++ RNIPPLV +F 
Sbjct: 73  YFFQGLISTLRLSVWGITFALVLGTLLGLARFSDSKWLRTPANAFIQLVRNIPPLVFVFI 132

Query: 148 LYKSVL-SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
            Y  V   ++P+     +L       N    F     +    +    F +G++ + +   
Sbjct: 133 FYFFVSNQLIPLLGLDDILRNYRGEPNAIQHFFFGPANLWENLASGVFCIGLLSAAYVAE 192

Query: 207 LSR 209
           + R
Sbjct: 193 VVR 195


>gi|120609003|ref|YP_968681.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120587467|gb|ABM30907.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 260

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 71/213 (33%), Positives = 107/213 (50%), Gaps = 12/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + S + G+VL   A  L+R       +     YI  ++I G P LV I   Y  
Sbjct: 58  TTLWLTLVSGLCGLVLGTGA-ALARTARWTPLRWAARFYI--WVIRGTPLLVQILFVY-- 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PVL            P+F +  +AL     A+ +E +R+GL+AVPRGQ EAA ALG
Sbjct: 113 -FALPVLVP------GLNLPDFAAAVVALGLNVGAYNSEAIRAGLLAVPRGQTEAARALG 165

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       V+ PQA +  +PPL S ++ LLK+SSLA A+G  +L +VG  I + T Q I
Sbjct: 166 LSRTHVFFDVVFPQAFKISLPPLVSNFVALLKDSSLAYAIGVVELTNVGNRIQSATFQPI 225

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +      YL L+ ++    N +  +  ++ +
Sbjct: 226 ATLSTVAVTYLLLTTLVTQVSNAIEHRFDVEGR 258



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 32/78 (41%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                 A A   G   T WL     +   ++GT     R +    + W  R Y+ V R  
Sbjct: 43  DPIGPNAQAFADGARTTLWLTLVSGLCGLVLGTGAALARTARWTPLRWAARFYIWVIRGT 102

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV I F+Y ++  ++P
Sbjct: 103 PLLVQILFVYFALPVLVP 120


>gi|78186725|ref|YP_374768.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78186899|ref|YP_374942.1| amino acid ABC transporter permease [Chlorobium luteolum DSM 273]
 gi|78166627|gb|ABB23725.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Chlorobium luteolum DSM 273]
 gi|78166801|gb|ABB23899.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Chlorobium luteolum DSM 273]
          Length = 508

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 15/224 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                      T   I VFS +LG +         R       +    ++IS  L+ G P
Sbjct: 294 NRWQLILEGFRTTLVISVFSALLGTLFGALVC-FMRMSRLNILRVSAGVFIS--LLRGTP 350

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVL+ L + + F             S      +   IA     AA+ AEI R+G+  + 
Sbjct: 351 VLVLLMLVFYVVF------------ASVNIDPVLVAVIAFGLNFAAYSAEIFRAGIEGID 398

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA IA+G T       ++LPQ ++ I+P    ++++L+K +S+   +   DL   G
Sbjct: 399 RGQTEAGIAMGFTGPATFYFIVLPQTLQRILPVYKGEFISLVKMTSIVGYIAVQDLTKAG 458

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I ++T  A   +++   +Y  LS  +   +  L   +A K +
Sbjct: 459 DIIRSRTFDAFFPLIMVAALYFFLSWALMRMLEYLEGMMAPKHR 502



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 1/100 (1%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I +         +    IL GF  T  ++    +  T+ G LV   R+S   ++     
Sbjct: 281 GIAESFRSNILLENRWQLILEGFRTTLVISVFSALLGTLFGALVCFMRMSRLNILRVSAG 340

Query: 131 VYVEVFRNIPPLVVIFFLYKSVL-SVLPIPDHSIVLPFGM 169
           V++ + R  P LV++  ++  V  SV   P    V+ FG+
Sbjct: 341 VFISLLRGTPVLVLLMLVFYVVFASVNIDPVLVAVIAFGL 380


>gi|15677362|ref|NP_274517.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis MC58]
 gi|121635180|ref|YP_975425.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria meningitidis FAM18]
 gi|218768491|ref|YP_002343003.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria meningitidis Z2491]
 gi|254805275|ref|YP_003083496.1| putative amino acid ABC transporter [Neisseria meningitidis
           alpha14]
 gi|7226752|gb|AAF41865.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis MC58]
 gi|120866886|emb|CAM10645.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria meningitidis FAM18]
 gi|121052499|emb|CAM08838.1| putative binding-protein-dependent transport systems inner membrane
           protein [Neisseria meningitidis Z2491]
 gi|254668817|emb|CBA06816.1| putative amino acid ABC transporter [Neisseria meningitidis
           alpha14]
 gi|254670681|emb|CBA06791.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha153]
 gi|254673241|emb|CBA08243.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha275]
 gi|261392244|emb|CAX49764.1| putative amino acid ABC transporter permease protein [Neisseria
           meningitidis 8013]
 gi|308389654|gb|ADO31974.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis alpha710]
 gi|316986034|gb|EFV64971.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Neisseria
           meningitidis H44/76]
 gi|319410739|emb|CBY91122.1| putative amino acid ABC transporter permease protein [Neisseria
           meningitidis WUE 2594]
 gi|325128575|gb|EGC51447.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           N1568]
 gi|325130591|gb|EGC53338.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           OX99.30304]
 gi|325132674|gb|EGC55359.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           M6190]
 gi|325134674|gb|EGC57314.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           M13399]
 gi|325136597|gb|EGC59198.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           M0579]
 gi|325138562|gb|EGC61125.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           ES14902]
 gi|325140663|gb|EGC63180.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           CU385]
 gi|325142710|gb|EGC65090.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           961-5945]
 gi|325144801|gb|EGC67092.1| polar amino amino acid ABC transporter [Neisseria meningitidis
           M01-240013]
 gi|325198631|gb|ADY94087.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis G2136]
 gi|325199888|gb|ADY95343.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis H44/76]
 gi|325201799|gb|ADY97253.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis M01-240149]
 gi|325204486|gb|ADY99939.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis M01-240355]
 gi|325205744|gb|ADZ01197.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis M04-240196]
 gi|325208448|gb|ADZ03900.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria meningitidis NZ-05/33]
          Length = 248

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + + LLY++ F   G P  V I +   + F   V             I         
Sbjct: 60  WALRKVSLLYVTLF--RGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLEKRYNPQHR 248


>gi|304387087|ref|ZP_07369338.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Neisseria meningitidis ATCC 13091]
 gi|304338836|gb|EFM04939.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Neisseria meningitidis ATCC 13091]
          Length = 248

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 9/197 (4%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGS 260
           S        + + LLY++ F   G P  V I +   + F   V             I   
Sbjct: 54  SMRVLAWALRKVSLLYVTLF--RGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALR 111

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+
Sbjct: 112 RGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQAL 171

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R ++PPL S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  
Sbjct: 172 RRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTF 231

Query: 381 IALFMNRLNAKIALKEK 397
           +     RL  +   + +
Sbjct: 232 LGWIFLRLEKRYNPQHR 248


>gi|328552037|gb|AEB22529.1| YxeN [Bacillus amyloliquefaciens TA208]
          Length = 224

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 15/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F        +    +T+       VF+ + G++L+L                L  +YI
Sbjct: 6   WGFMFSAFPALIEALPITLVMAVAAMVFAVIGGLILALITKN-----RIPVLHQLSKVYI 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+PTLV + L Y   +  P L       G +      +  I LS   AA++AEI
Sbjct: 61  SFF--RGVPTLVQLFLIY---YGLPQL-----FPGMSKMTALTAAIIGLSLKNAAYLAEI 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L +V  GQ+EA +++G+T  +A R ++ PQA+R+ +P   + ++ LLK +SLA  +
Sbjct: 111 FRAALNSVDEGQLEACLSVGMTKSQAYRRIIFPQAIRNALPATGNTFIGLLKETSLAFTL 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  ++ + G    +   +  E  L    +Y  L+I+ ++  + L   I+   +
Sbjct: 171 GVMEMFAQGKMYASGNLKYFETYLAVAIMYWILTIIYSVLQDLLERAISKPYR 223



 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 39/89 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +    S   A++     T  +A + M+ A I G ++     +   ++  + +VY+  F
Sbjct: 4   IDWGFMFSAFPALIEALPITLVMAVAAMVFAVIGGLILALITKNRIPVLHQLSKVYISFF 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           R +P LV +F +Y  +  + P       L
Sbjct: 64  RGVPTLVQLFLIYYGLPQLFPGMSKMTAL 92


>gi|312882264|ref|ZP_07742010.1| ABC-type amino acid transport system permease component [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370108|gb|EFP97614.1| ABC-type amino acid transport system permease component [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 246

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 29/245 (11%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSR 209
                       G+      L   + T+  +    +F+ ++G++++  A       R   
Sbjct: 22  WGWYVLDPRQEQGLANMLFLLKGFSDTIKISLISMLFAMLIGLLVAFPALSSSGLIRGVN 81

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + +  +++P+L +  ++ +GLPTL  ++L +                       F + 
Sbjct: 82  RTYVEIIRSVPVLVLLLWVYYGLPTLFDVSLNH-----------------------FWAG 118

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS   +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA+R I+PPL +
Sbjct: 119 VIALSIAESAFMAEVFRGGIQAIRRGQHEAAHSLGLGYWQTMRLVILPQALRQILPPLGN 178

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++ +LK SSL   +G +DL      ++      +EI    +  YL L ++++  +  + 
Sbjct: 179 QFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVIEYLVLILLVSQAVRWVE 238

Query: 390 AKIAL 394
            ++A+
Sbjct: 239 KRVAI 243



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +L GF +T  ++   M+ A +IG LV    LS++ L+  + R YVE+ R
Sbjct: 41  LLKGFSDTIKISLISMLFAMLIGLLVAFPALSSSGLIRGVNRTYVEIIR 89


>gi|171317514|ref|ZP_02906704.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097343|gb|EDT42188.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 230

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  ++L++   R S                L   Y+S  L+ G P LV I +
Sbjct: 26  VLSMVFGLLGAVMLAMMGIRQSEPLEGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 83

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 84  IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 133 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAAT 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    +Y  L  ++         +++L  + 
Sbjct: 193 YQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPARH 230


>gi|158424357|ref|YP_001525649.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158331246|dbj|BAF88731.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 278

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 5/211 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   +  +GIVL +  T + R       + + + Y+  F   G P ++ + L + L  
Sbjct: 66  IVMTFAAMGVGIVLGVI-TAIMRMSPNPVLRGVAMGYVWLF--RGTPVILQLLLWFNLAL 122

Query: 247 DKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             P L    +  +    V    ++  + L     A+ +E+VR+GL+AV  GQ EAA A+G
Sbjct: 123 IFPRLGISGWWTVRTVEVMTPVVAALLGLGINQGAYTSEVVRAGLLAVDTGQYEAAKAIG 182

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T   A R ++LPQAMR IIPPL ++++ ++K +SLA  + F +++     I     + I
Sbjct: 183 MTRLLALRRIVLPQAMRVIIPPLGNEFIGMVKLTSLASVIQFTEILHSAQNIYYANSRVI 242

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E++++    YL++  ++      L  + A  
Sbjct: 243 ELLIVAAIWYLAIVSLLTPLQMLLERRFARG 273



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 2/92 (2%)

Query: 75  GIVPYTSDSSYATA--ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           G++ +    ++ TA  IL G +NT  + F+ M    ++G +    R+S N ++  +   Y
Sbjct: 42  GMIEWQFVGTFLTAPVILTGLLNTIVMTFAAMGVGIVLGVITAIMRMSPNPVLRGVAMGY 101

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           V +FR  P ++ +   +   L    +      
Sbjct: 102 VWLFRGTPVILQLLLWFNLALIFPRLGISGWW 133


>gi|302671182|ref|YP_003831142.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus
           B316]
 gi|302395655|gb|ADL34560.1| amino acid ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 225

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 18/220 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +    +T+      F  S V+G++L+L           K  + L   YI  F   G P +
Sbjct: 18  IPGIKVTIPLTILSFALSLVVGLLLALIQVA-----DIKGLRQLARFYIWVF--RGTPLI 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +           F           F S  +A      A+ AE+ RS ++A+P+G
Sbjct: 71  VQLFIIF-----------FGLPNIGITLNAFPSAVLAFGLNLGAYNAEVFRSAILAIPKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA  +GL++ +A   V+LPQ+     P L +  ++LLK+++LA ++   DL +    
Sbjct: 120 QMEAAYMIGLSYPQAMIRVILPQSFPVAFPNLFNNLISLLKDTALASSITVIDLFTTAQQ 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I  +T +   + L   FIYL  S  +      L  K+  K
Sbjct: 180 IAARTYEPFALYLEAAFIYLIFSTALTWLQRYLEQKLVWK 219



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 41/107 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SS+   ++ G   T  L       + ++G L+   +++  K +  + R Y+ VFR  P 
Sbjct: 10  TSSFFKILIPGIKVTIPLTILSFALSLVVGLLLALIQVADIKGLRQLARFYIWVFRGTPL 69

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +V +F ++  + ++    +          LN    +         A 
Sbjct: 70  IVQLFIIFFGLPNIGITLNAFPSAVLAFGLNLGAYNAEVFRSAILAI 116


>gi|300716002|ref|YP_003740805.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299061838|emb|CAX58954.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 247

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F  SFVLG +L+L    + R            LYI  F   G P ++ + L Y 
Sbjct: 19  PVTLGLFFASFVLGGLLALVILAM-RMSRNPLLSGFARLYILVF--RGSPLMIQLFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S V P     F    +AL+  TA++ AEI R GL+A+P GQ+EA
Sbjct: 76  ------GLGQFEVIRHSFVWPVLREPFFCAVVALALCTASYTAEIFRGGLLAIPSGQIEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GMACGMSRWLLLRRIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T + +E+ +    IYL L+ +I      +  +++ + +
Sbjct: 190 TYRTMEVFVCAALIYLILNFIIVQIYAWIERRLSPRLR 227



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 3/152 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +      T  L F+  +   ++  ++ A R+S N L++   R+Y+ VFR  P ++ +F +
Sbjct: 14  LAAALPVTLGLFFASFVLGGLLALVILAMRMSRNPLLSGFARLYILVFRGSPLMIQLFLI 73

Query: 149 YK--SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA-KIFVFSFVLGIVLSLFAT 205
           Y       V+       VL    F     L+  T +      +  + +   G + +  A 
Sbjct: 74  YYGLGQFEVIRHSFVWPVLREPFFCAVVALALCTASYTAEIFRGGLLAIPSGQIEAGMAC 133

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
            +SR    +   A  +L  +         L++
Sbjct: 134 GMSRWLLLRRIIAPIMLRYALPAYSTEAILLV 165


>gi|6685719|sp|P72296|OCCM_RHIME RecName: Full=Octopine transport system permease protein occM
 gi|1519473|gb|AAB07519.1| OccM [Sinorhizobium meliloti]
          Length = 245

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 5/234 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +PF               +    K+ VFS  +G VL+ F+  L R             YI
Sbjct: 1   MPFDPLFLWETFIALLAGIPLALKLAVFSIAVGTVLA-FSLALMRVSRRWWLDFPARFYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV I + Y      P L     +    +   +     AL+  TAA+ AEI
Sbjct: 60  FAF--RGTPLLVQIYIIYYGLSQFPGLRH--SLLWPFLREAYWCALGALALNTAAYSAEI 115

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL++VP GQ+EAA A G+      R +++PQA+R ++P  +++ + ++K++SLA  +
Sbjct: 116 MRGGLLSVPAGQIEAARACGMARVLLFRRIIIPQAIRQMLPGYSNEVVLMVKSTSLASTI 175

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++  +   +I++T + +E+      IYL+++ + A     +   +  + +K
Sbjct: 176 TLMEITGIAAKLISETYRPVEVFACAGAIYLTMNFIAARLFALIEWSLWPERRK 229



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G      LA   +   T++   +   R+S    + +  R Y+  FR  P LV I+ 
Sbjct: 14  ALLAGIPLALKLAVFSIAVGTVLAFSLALMRVSRRWWLDFPARFYIFAFRGTPLLVQIYI 73

Query: 148 LYKSVLSVL 156
           +Y  +    
Sbjct: 74  IYYGLSQFP 82


>gi|152974179|ref|YP_001373696.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152022931|gb|ABS20701.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 230

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKLLNSIAHIYI--AVIRGTPLIVQIAILY------------FGITSIVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+++  A R ++LPQA R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQAFRLSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q +   ++    YL L ++   F+N L
Sbjct: 147 NQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNYQQLNTYIVVGIYYLVLVLLFTYFVNLL 206

Query: 389 NAKIALKE 396
             +++ K+
Sbjct: 207 EKRLSRKQ 214


>gi|262203727|ref|YP_003274935.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           bronchialis DSM 43247]
 gi|262087074|gb|ACY23042.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia
           bronchialis DSM 43247]
          Length = 582

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 114/214 (53%), Gaps = 16/214 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S VLG +L +    ++     +  +    +Y   F   GLP +V+I +      
Sbjct: 364 LILSLVSGVLGTILGMLL-AVAGISRSRWLRWPARIYTDIF--RGLPAVVVILIV----- 415

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               LG    + G T +  +    +AL+   AA+I EI RSG+ +V  GQ+EA+ A+G +
Sbjct: 416 ---GLGIGPVVKGLTGNNPYWLGAVALALLAAAYIGEIFRSGIQSVDSGQLEASRAIGFS 472

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           +R++ RLV++PQ +R ++P L +Q+++L+K+SSL   +G      +L +VG  +  QTG 
Sbjct: 473 YRQSMRLVVVPQGVRRVLPALMNQFISLIKDSSLVYFLGLLATQRELFAVGRDLNAQTGN 532

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  ++    +YL+L+I +   +N ++ ++    
Sbjct: 533 -LSPLVAAGIVYLALTIPLTHLVNHIDNRLRTGR 565



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 72/198 (36%), Gaps = 4/198 (2%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+   I  G VNT  L+    +  TI+G L+    +S ++ + W  R+Y ++FR +P 
Sbjct: 349 QQSFPDLIKTGLVNTLILSLVSGVLGTILGMLLAVAGISRSRWLRWPARIYTDIFRGLPA 408

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +VVI  +   +  V+     +     G        +     +  +    V S  L    +
Sbjct: 409 VVVILIVGLGIGPVVKGLTGNNPYWLGAVALALLAAAYIGEIFRSGIQSVDSGQLEASRA 468

Query: 202 L-FATRLSRHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           + F+ R S           + LP L      +    +LV          +   +G+    
Sbjct: 469 IGFSYRQSMRLVVVPQGVRRVLPALMNQFISLIKDSSLVYFLGLLATQRELFAVGRDLNA 528

Query: 258 GGSTVSPEFMSLYIALSC 275
               +SP   +  + L+ 
Sbjct: 529 QTGNLSPLVAAGIVYLAL 546


>gi|260459412|ref|ZP_05807667.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259034966|gb|EEW36222.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 273

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 7/257 (2%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V + L    ++        +   +      +        +     +   S VLG VLS 
Sbjct: 23  IVGYALVGLWIAFGLGIVSYLFFAWNAAFFAKYAPAYLRGLGVTLSLVAISMVLGAVLS- 81

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGST 261
                 R    +    L   Y+  F   G P LV   L Y  L   +P L          
Sbjct: 82  MPVAYGRMSRNRILSGLAYCYVYFF--RGTPLLVQTFLVYYGLGSFRPELQMVGL--WDF 137

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F     A S  TAA+ AEI+R  + +VPRGQ E A +LGL   +  R ++LPQA+ 
Sbjct: 138 FKDAFNCGVFAFSLNTAAYQAEILRGAIESVPRGQWEGAASLGLHKLQTLRKIVLPQALI 197

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             + P  ++ + ++K S++   +   DL+         +   I+  +    +YL +  ++
Sbjct: 198 VALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFD-IQAYIWVALVYLVMVELL 256

Query: 382 ALFMNRLNAKIALKEKK 398
              +  +  +I +  K+
Sbjct: 257 RHGIEWIERRITIHLKR 273



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 37/84 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA A L G   T  L    M+   ++   V  GR+S N++++ +   YV  FR  P LV 
Sbjct: 55  YAPAYLRGLGVTLSLVAISMVLGAVLSMPVAYGRMSRNRILSGLAYCYVYFFRGTPLLVQ 114

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
            F +Y  + S  P      +  F 
Sbjct: 115 TFLVYYGLGSFRPELQMVGLWDFF 138


>gi|219872122|ref|YP_002476497.1| amino acid ABC transporter permease [Haemophilus parasuis SH0165]
 gi|219692326|gb|ACL33549.1| ABC-type amino acid transport system, permease component
           [Haemophilus parasuis SH0165]
          Length = 212

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 13/213 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGLPTLVLIALKY 242
            +  + + SF++G+ +++    +           L L ++  ++  I G P LV I + +
Sbjct: 8   VSIPLAIASFIIGMAIAVGVALVRVTSVNSAFHRLLLWFVKGYISIIRGTPMLVQICIVF 67

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +  P +G F             +  I  S    A+ +E +R+ +++VP+GQ EA   
Sbjct: 68  ---YGLPAIGIF--------IDPIPAAIIGFSINIGAYGSETIRAAILSVPKGQWEAGYT 116

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+T+ +  R ++ PQA R  +PPL++ ++ L K++SLA  V   ++  V   + N +  
Sbjct: 117 IGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYD 176

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + + +    IY     ++     RL  +    
Sbjct: 177 FLPVYIEAGLIYWCFCWVLFFIQARLEKRFDRY 209


>gi|150398331|ref|YP_001328798.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150029846|gb|ABR61963.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 226

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF LG+ L L  T + R F       +   Y+  ++I G P LV + 
Sbjct: 17  WAGLIFTIPLTLLSFTLGLALGLV-TAVVRLFAPAPFAVVARFYV--WVIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VPRGQ EA
Sbjct: 74  VIFY-----------GLPSMGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPRGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++GL+  +A R  +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGLSWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + + + +    IYL +S +++    +L  + A  
Sbjct: 183 SYEPLILYIEAALIYLVMSSVLSALQGKLEQRFARY 218



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L          +G +    RL A    A + R YV V R  P LV +F +
Sbjct: 16  LWAGLIFTIPLTLLSFTLGLALGLVTAVVRLFAPAPFAVVARFYVWVIRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 76  FYGLPSMGILLDAFPAALIGFTLN 99


>gi|78358109|ref|YP_389558.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220514|gb|ABB39863.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 292

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 61/272 (22%), Positives = 122/272 (44%), Gaps = 19/272 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD---TNAKIFVFSFVLGI 198
           ++  FF ++            ++  +    + +    P L +    T  ++ +++ +L +
Sbjct: 21  VLPAFFAWRIWTGAGYDWQWHVIWQYFFRHDAQAGWVPNLLVQGLLTTIRLSIWATLLAV 80

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------QLH 245
           V    A  L+R    +  + L   Y+ +        LV I   +              L+
Sbjct: 81  VFGTLAG-LARVSRSRLRRMLARTYVESVRNLPPLVLVFIFYFFVSSQVMPATGLEDALY 139

Query: 246 FDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              P+  +     +G       F +  + L+ Y  A+IAEIVR+G+ +VPRGQ EA+ +L
Sbjct: 140 RLSPLQQRIVEFLLGPLPAVSAFTAGVLTLAIYEGAYIAEIVRAGVESVPRGQWEASASL 199

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G       RLV+ PQA++ IIPPL  Q+++ +K+S++   +   +L   G  ++  T + 
Sbjct: 200 GFGRFDMLRLVIFPQALKVIIPPLAGQFISTIKDSAIVSVISVQELTFQGLELMASTFRT 259

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            E+      +YL L++  +L   ++ A++  +
Sbjct: 260 FEVWTTIALLYLMLTLFCSLLARKVEARLRWR 291



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 46/107 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  L+    + A + GTL G  R+S ++L   + R YVE  RN+PPLV++F  
Sbjct: 61  LVQGLLTTIRLSIWATLLAVVFGTLAGLARVSRSRLRRMLARTYVESVRNLPPLVLVFIF 120

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           Y  V S +          + +    + +    L        F    +
Sbjct: 121 YFFVSSQVMPATGLEDALYRLSPLQQRIVEFLLGPLPAVSAFTAGVL 167


>gi|163941155|ref|YP_001646039.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|229012723|ref|ZP_04169893.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
 gi|229061107|ref|ZP_04198458.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
 gi|163863352|gb|ABY44411.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|228718190|gb|EEL69828.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
 gi|228748558|gb|EEL98413.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
          Length = 222

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +             +     I V S ++   + +    ++++   KT    P+  +
Sbjct: 1   MKFDVAYFLESFPQLFKYVYITLGITVVSMIISFFIGIGLAIITKN---KTKFLYPIARV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G P LV +   + L+F  P +         TV     +  I LS   AA+++EI
Sbjct: 58  YISFFRGTPLLVQL---FVLYFGLPQIS-----PAFTVLTAMQATLIGLSLNNAAYLSEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L AV  GQM+A +++G+T  +A R ++ PQA+R  +P L + ++ LLK SSL+ A+
Sbjct: 110 IRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G A++++    +  Q+ + +E  L    +Y  ++I+I+    RL  K+
Sbjct: 170 GVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKRLEKKL 217



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    MI +  IG  +     +  K +  I RVY+  FR  P LV +F LY  +  +
Sbjct: 22  TLGITVVSMIISFFIGIGLAIITKNKTKFLYPIARVYISFFRGTPLLVQLFVLYFGLPQI 81

Query: 156 LPIPDHSIVLP 166
            P       + 
Sbjct: 82  SPAFTVLTAMQ 92


>gi|223933819|ref|ZP_03625787.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|330833683|ref|YP_004402508.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|223897502|gb|EEF63895.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|329307906|gb|AEB82322.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 219

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF  G+++++  T L +       K +   YI  +++ G P LV +   Y +
Sbjct: 23  VTIPLTILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L          V   F S  +  S  T A+ AE +R+ + +VP+GQ+EA  ++G
Sbjct: 77  FFGLPSL--------GIVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R ++LPQA R   PPL++  + L+K++SLA  +   ++      I  +T +  
Sbjct: 129 MSFAQTMRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +      +YL  S ++         K+A+ 
Sbjct: 189 ALYCEVALVYLLFSTILTKLQAYGEKKLAVY 219



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S++  ++ G + T  L         +I       +++   ++  + R Y+ V R  P L
Sbjct: 11  DSFSQILVPGLLVTIPLTILSFTFGLLIAIGTALVQIAQIPILKQVARFYIWVVRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V ++ ++  + S+  + D          +N
Sbjct: 71  VQLYVIFFGLPSLGIVLDAFPSAVLVFSVN 100


>gi|325517961|gb|EGC97785.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 230

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  +VL++   R S                L   Y+S  L+ G P LV I +
Sbjct: 26  VLSMVFGLLGAVVLAMMGIRQSEALEGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 83

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 84  IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 133 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEMIAAT 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    +Y  L  ++         +++L  + 
Sbjct: 193 YQPLPLYLAAAAVYWVLCQILEWVQRWYEKRLSLPARH 230


>gi|262404203|ref|ZP_06080758.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
 gi|262349235|gb|EEY98373.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
          Length = 225

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 9/209 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +  FS V+G++ ++    ++R   +K        YI    + G P LV + L Y 
Sbjct: 18  WTTVWLVSFSLVVGLLWAI-PMAIARSSKQKWLSFPAWGYIYF--LRGTPLLVQLYLIYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  + QF  + G+     +    +A    T+A+ AEI+R  +  +P+G++EAA A 
Sbjct: 75  ------GMDQFFPVKGTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAY 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      + ++    
Sbjct: 129 GMGRWQTYQRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAP 188

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E  L     Y+SL+ +I     +   + 
Sbjct: 189 FEAFLTAGLFYMSLTFIILWCFKQAENRF 217



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 34/103 (33%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++   +    +   R S  K +++    Y+   R  P LV ++ 
Sbjct: 12  VYLGGLWTTVWLVSFSLVVGLLWAIPMAIARSSKQKWLSFPAWGYIYFLRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +Y  +    P+        +   L    L+    T +      
Sbjct: 72  IYYGMDQFFPVKGTLWEHAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|111020458|ref|YP_703430.1| amino acid ABC transporter permease [Rhodococcus jostii RHA1]
 gi|110819988|gb|ABG95272.1| probable ABC amino acid transporter, permease component
           [Rhodococcus jostii RHA1]
          Length = 603

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 112/239 (46%), Gaps = 16/239 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                                +     + + S ++G VL +    ++     +  +    
Sbjct: 358 KDTFFNWDLYTRAFPDLLKTGLPNTLILALASGIVGTVLGMLL-AMAGISRTRWLRWPAR 416

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y   F   GLP +V+I +          LG    + G T +  +     ALS   +A+I
Sbjct: 417 IYTDVF--RGLPAVVIILIV--------GLGAGPIVKGLTGNNPYWLGAAALSLLASAYI 466

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI RSG+ +V  GQ+EA+ ALG ++RK+  LV++PQ +R ++P L +Q+++L+K+SSL 
Sbjct: 467 GEIFRSGIQSVEPGQLEASRALGFSYRKSMTLVVVPQGVRRVLPALMNQFISLIKDSSLI 526

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G      +L +VG  +  QTG  +  ++     YL+++I +   +N ++ ++    
Sbjct: 527 YFLGLLVSQRELFAVGRDLNAQTGN-LSPLVAAGLFYLAMTIPLTHLVNYIDNRLRTGR 584



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 67/205 (32%), Gaps = 13/205 (6%)

Query: 83  SSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
             Y  A       G  NT  LA +  I  T++G L+    +S  + + W  R+Y +VFR 
Sbjct: 365 DLYTRAFPDLLKTGLPNTLILALASGIVGTVLGMLLAMAGISRTRWLRWPARIYTDVFRG 424

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P +V+I  +      ++     +     G    +   S     +  +    V    L  
Sbjct: 425 LPAVVIILIVGLGAGPIVKGLTGNNPYWLGAAALSLLASAYIGEIFRSGIQSVEPGQLEA 484

Query: 199 VLSL-FATRLSRHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
             +L F+ R S           + LP L      +    +L+     Y L         F
Sbjct: 485 SRALGFSYRKSMTLVVVPQGVRRVLPALMNQFISLIKDSSLI-----YFLGLLVSQRELF 539

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAA 279
                       +S  +A   +  A
Sbjct: 540 AVGRDLNAQTGNLSPLVAAGLFYLA 564


>gi|258406150|ref|YP_003198892.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257798377|gb|ACV69314.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 598

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 19/258 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV-FSFVLGIVLS 201
           ++ F       ++  +         G   N              A I +  SF +G+++ 
Sbjct: 355 LMSFHWDVVWENLDTLLIWRFPQSGGGEENFMWGLGGLSFSILMAVIAISISFFIGLIVG 414

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L      R    +  +   ++YI   +I G P +++I   Y           F  I   T
Sbjct: 415 L-----GRMSKNRILRLPCMVYIE--VIRGNPLIIVIFWVYF----------FLPIFIKT 457

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F S  IAL+ +T A+IAEIVR G+  +P GQ EAA   GL +    R ++LPQA++
Sbjct: 458 YLNVFWSATIALTIFTGAYIAEIVRGGIQNIPPGQFEAAYGTGLGYWSTMRHIVLPQALK 517

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIM 380
            +IP +  Q++ + K++SLA  +G  +L  V   + N+      EI      +Y      
Sbjct: 518 QMIPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLNNRLMIYPFEIYTSVAALYFICCYS 577

Query: 381 IALFMNRLNAKIALKEKK 398
           ++L   RL  K+     +
Sbjct: 578 MSLMARRLENKLTPASAR 595



 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 118/256 (46%), Gaps = 5/256 (1%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+V   +Y          +    + F             L       I +     GI L 
Sbjct: 20  LLVGTAIYYWGWIFDFGYEFDWSVLFTFNDTYGEYLGLNLLKGLKVTIIISLISAGIALG 79

Query: 202 LF-ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           L     L R    K        Y+  F     P LV +   Y            NF+   
Sbjct: 80  LGTVFGLGRLSSFKPFYLFSTWYVEFF--RNTPLLVQLFFWYFALPKALPEAARNFVFSL 137

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               EF S  + L+ YT++F+AE++R+G+ ++P+G +EAA + GLT+ +A R V+LP A 
Sbjct: 138 DY--EFWSATLGLAIYTSSFMAEVIRAGVQSIPKGLLEAAYSSGLTYFQALRTVILPLAF 195

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+IIPPL S++LN +KNSSLA+ VG A+L      I + T +  E       +YL LS+ 
Sbjct: 196 RAIIPPLGSEFLNNMKNSSLAMVVGVAELTWQSQQIESLTFRGFEATTGATVLYLGLSLA 255

Query: 381 IALFMNRLNAKIALKE 396
           I+  +N +N ++ +++
Sbjct: 256 ISGLLNMINTRLRIED 271



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 6/134 (4%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVN----TFWLAFSGMIPATIIGTLVGA 116
            G++ +  G+E D  ++ +T + +Y   + +  +     T  ++      A  +GT+ G 
Sbjct: 29  WGWIFD-FGYEFDWSVL-FTFNDTYGEYLGLNLLKGLKVTIIISLISAGIALGLGTVFGL 86

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GRLS+ K        YVE FRN P LV +FF Y ++   LP    + V        +  L
Sbjct: 87  GRLSSFKPFYLFSTWYVEFFRNTPLLVQLFFWYFALPKALPEAARNFVFSLDYEFWSATL 146

Query: 177 SFPTLTMDTNAKIF 190
                T    A++ 
Sbjct: 147 GLAIYTSSFMAEVI 160



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 7/253 (2%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           +      ++FL+ +  +   +    +S     + E     +                 L 
Sbjct: 335 LAKGGFVLVFLYILYKIGQGL----MSFHWDVVWENLDTLLIWRFPQSGGGEENFMWGLG 390

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   +  +A   +  +  IG +VG GR+S N+++   C VY+EV R  P ++VIF++Y  
Sbjct: 391 GLSFSILMAVIAISISFFIGLIVGLGRMSKNRILRLPCMVYIEVIRGNPLIIVIFWVYFF 450

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH- 210
           +   +    +             G     +       I    F       L      RH 
Sbjct: 451 LPIFIKTYLNVFWSATIALTIFTGAYIAEIVRGGIQNIPPGQFEAAYGTGLGYWSTMRHI 510

Query: 211 -FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
              +   + +P +      IF   +L  +    +L F    L     I    +     +L
Sbjct: 511 VLPQALKQMIPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLNNRLMIYPFEIYTSVAAL 570

Query: 270 YIALSCYTAAFIA 282
           Y  + CY+ + +A
Sbjct: 571 YF-ICCYSMSLMA 582


>gi|328554131|gb|AEB24623.1| YqiY [Bacillus amyloliquefaciens TA208]
 gi|328912522|gb|AEB64118.1| high affinity arginine ABC transporter (permease) [Bacillus
           amyloliquefaciens LL3]
          Length = 219

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + F    +    KI + S V+G+VL +    L +       K +   Y 
Sbjct: 1   MNLDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVL-SLFKISTISPLKWIADFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + + Y   F  P L  F          +F +   ALS  +AA+++EI
Sbjct: 60  SIF--RGTPLVLQLMIIY---FGMPQLLGFQI-------DQFWAAVTALSLNSAAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ A+ +GQ EAA+ALG+ + K  + +LLPQA ++I P + ++ + L K S++   +
Sbjct: 108 IRAGINAIDKGQKEAAVALGVPYGKMMKDLLLPQAFKNISPAIINELITLTKESAIVTVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++         T   +E +++  FIY  L +++A     +  K+   +
Sbjct: 168 GLGDIMRRAYQSGAATYNYLEPLIVAGFIYYVLVLILAFIGKGVERKLKAND 219



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 34/88 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++       IL G   T  +     +   ++G ++   ++S    + WI   Y  +F
Sbjct: 3   LDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVLSLFKISTISPLKWIADFYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           R  P ++ +  +Y  +  +L        
Sbjct: 63  RGTPLVLQLMIIYFGMPQLLGFQIDQFW 90


>gi|295099959|emb|CBK89048.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium cylindroides T2-87]
          Length = 242

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 21/230 (9%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-------KTGKALPLLYISTF 227
            L     T+       +  F++G+++          +           G+ +   YI  F
Sbjct: 19  FLYGIGNTLLFALIGTLVGFLIGLLVGGIRAIEINDYDSTPVKAIKNIGRWITSFYIWVF 78

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G P +V     Y L            +        F++  + +S  T A++AEI+R+
Sbjct: 79  --RGTPMMVQAMFVYYL------------LRPVLQWTPFVAGLVIISINTGAYMAEIIRA 124

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +V  GQ EAA +LG+T  +    ++ PQA+++  P + +Q +  +K+SS+   +G  
Sbjct: 125 GIQSVDNGQNEAAKSLGMTTIQTLIFIVFPQAIKNTFPSIGNQLIVNIKDSSMLNVIGVT 184

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L     ++     Q IE  L+   IYL L+ + +  +N L  ++  + K
Sbjct: 185 ELYFQTTSVAGSNYQYIETFLVSALIYLVLTTLASFLLNFLEGRLDEERK 234



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 12/74 (16%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRL------------SANKLVAWICRVYVEVF 136
            L G  NT   A  G +   +IG LVG  R             +   +  WI   Y+ VF
Sbjct: 19  FLYGIGNTLLFALIGTLVGFLIGLLVGGIRAIEINDYDSTPVKAIKNIGRWITSFYIWVF 78

Query: 137 RNIPPLVVIFFLYK 150
           R  P +V   F+Y 
Sbjct: 79  RGTPMMVQAMFVYY 92


>gi|227509839|ref|ZP_03939888.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190763|gb|EEI70830.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 235

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 19/224 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    V S++ G++L +      ++     G          F+I  +  L
Sbjct: 17  LEGAWVTILVSVCSIVLSYIFGVILGVTRYVQIKYLSAIVG----------FVIDIIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            LI + +  +F  P L                +  IA++ + AA +AEIVR+G+ ++P G
Sbjct: 67  PLILIIFFTYFGLPHL--------GFKPDPIWASVIAMAVFEAAMVAEIVRAGIASIPTG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A A GL++ +A   ++LPQA+R++IP + SQ+++L+K++SLA  +   DL++    
Sbjct: 119 QMEGARANGLSYWQALWYIVLPQAIRNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I  Q T   I + L    +Y  +   ++LF   L  +I    KK
Sbjct: 179 IYGQNTNYTIPMFLALAVMYFIVCYSLSLFSKYLEKRIGGGNKK 222



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 37/82 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   ++ + I G ++G  R    K ++ I    +++ RN+P 
Sbjct: 9   SWVNIKFLLEGAWVTILVSVCSIVLSYIFGVILGVTRYVQIKYLSAIVGFVIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           +++IFF Y  +  +   PD   
Sbjct: 69  ILIIFFTYFGLPHLGFKPDPIW 90


>gi|16119711|ref|NP_396417.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15162295|gb|AAK90858.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 242

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 18/234 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L F    +        LT+        F  + G++++L      R     T        +
Sbjct: 5   LVFDYVFSPAFFHGALLTLVITVTSLFFGMIAGLIVALLQESRIRPLQIFTL-------V 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +L  G P L  I   Y +                 +   F+S  IALS    A++AEI
Sbjct: 58  YLWLFRGTPVLFQIIFIYNV-----------LPTFGVMLSAFVSAVIALSLNEGAYMAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL AV +GQ  A +ALG+T       +++PQA R ++PP  +Q + +LK S+L   V
Sbjct: 107 IRSGLQAVKKGQRTAGLALGMTRFAVMCYIVIPQAARIVLPPTGNQMIGMLKTSALVSVV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L+ V     +   +  E +      YL+L+ +   F   L   +  K  +
Sbjct: 167 AVEELLLVANQTASSNFKYFEALTAAGIYYLALTSIFMGFQYLLERALDRKRPR 220



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 36/100 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A   G + T  +  + +    I G +V   + S  + +     VY+ +FR  P L  I F
Sbjct: 14  AFFHGALLTLVITVTSLFFGMIAGLIVALLQESRIRPLQIFTLVYLWLFRGTPVLFQIIF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +Y  + +   +    +     + LN        +     A
Sbjct: 74  IYNVLPTFGVMLSAFVSAVIALSLNEGAYMAEIIRSGLQA 113


>gi|288550086|ref|ZP_05969253.2| glutamine ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316709|gb|EFC55647.1| glutamine ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 232

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 12/243 (4%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +  V        ++ F        +            I V   V G+++ L A   +R +
Sbjct: 1   MFFVFHHGIQEYIMQFDWSAIWPAIPLLLEGAKMTLWISVLGLVGGLIIGLVAG-FARTY 59

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                  + L++I   +I G P +V +   Y   F  P+               F +  +
Sbjct: 60  GGWIANHIALVFIE--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVV 108

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q+
Sbjct: 109 TIMINSGAYIAEITRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRRMLPPLGNQW 168

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  +K++SL + +G A+L   G  II    +A+EI      +YL ++++++  + RL  +
Sbjct: 169 IISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVVYLIITLVLSFVLRRLERR 228

Query: 392 IAL 394
           + +
Sbjct: 229 MKI 231



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 62/202 (30%), Gaps = 4/202 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G++   IIG + G  R     +   I  V++EV R
Sbjct: 17  DWSAIWPAIPLLLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIANHIALVFIEVIR 76

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++                + +     ++               F   
Sbjct: 77  GTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEA 136

Query: 197 GIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           G+ L L      RH            PL       I      ++I +       + ++  
Sbjct: 137 GLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAG 196

Query: 254 FNFIGGSTVSPEFMSLYIALSC 275
                    +   + L I L  
Sbjct: 197 NFRALEIWSAVAVVYLIITLVL 218


>gi|319639192|ref|ZP_07993943.1| amino acid ABC transporter [Neisseria mucosa C102]
 gi|317399376|gb|EFV80046.1| amino acid ABC transporter [Neisseria mucosa C102]
          Length = 248

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + +   Y++ F   G P  V I +   + F   V             +         
Sbjct: 60  WVLRKISFWYVTLF--RGTPLFVQIVIWAYVWFPFFVHPADGVLISGEAAVDLRRSYGAL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALVANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +G A+L  V  TI  +     E +     IYL L+ ++     
Sbjct: 178 LASEFITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSVLGWVFL 237

Query: 387 RLNAKIALKEK 397
           RL ++   + +
Sbjct: 238 RLESRYNPQHR 248


>gi|222082422|ref|YP_002541787.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727101|gb|ACM30190.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 592

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 1/248 (0%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           + S    P     +    F     L     T+       +   +LG  L+L     S   
Sbjct: 51  LYSTFTNPRWGWGVFAEWFFAEPVLVGLGRTLLLTVLAAISGSILGTALALARVSKSPLL 110

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLY 270
              +   + LL     ++  L    L  L   +    P     F       +   F + +
Sbjct: 111 SGLSWGYIWLLRSIPMIVLLLVLNNLGYLYETIKIGIPFTDTVFIDYPTVQLLTPFAAAF 170

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   +AF AEIVR G+++V +GQ+EAA ALGL+ R+    ++LPQAMRSI+P   ++
Sbjct: 171 LGLTLNQSAFFAEIVRGGILSVDQGQLEAASALGLSRRRQAFRIVLPQAMRSILPTGFNE 230

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K++S+   +   +L      I  +  + I ++++    YL +  ++++    +  
Sbjct: 231 IIGLAKSTSMVYVLALPELFYTVQVIYRRNLEVIPLLMVATVWYLIIMTVLSIAQYYIER 290

Query: 391 KIALKEKK 398
             +    +
Sbjct: 291 YFSKGAVR 298



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 74/210 (35%), Gaps = 20/210 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL-----VV 144
           LVG   T  L     I  +I+GT +   R+S + L++ +   Y+ + R+IP +     + 
Sbjct: 75  LVGLGRTLLLTVLAAISGSILGTALALARVSKSPLLSGLSWGYIWLLRSIPMIVLLLVLN 134

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL---- 200
                   + +      ++ + +         +   L +  N   F    V G +L    
Sbjct: 135 NLGYLYETIKIGIPFTDTVFIDYPTVQLLTPFAAAFLGLTLNQSAFFAEIVRGGILSVDQ 194

Query: 201 -------SLFATRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                  +L  +R  + F     +A    LP  +     +    ++V +    +L +   
Sbjct: 195 GQLEAASALGLSRRRQAFRIVLPQAMRSILPTGFNEIIGLAKSTSMVYVLALPELFYTVQ 254

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           V+ + N      +    +   I ++  + A
Sbjct: 255 VIYRRNLEVIPLLMVATVWYLIIMTVLSIA 284


>gi|257467277|ref|ZP_05631588.1| amino acid ABC transporter permease [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315918406|ref|ZP_07914646.1| amino acid transport system permease [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313692281|gb|EFS29116.1| amino acid transport system permease [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 224

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 12/188 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +  + K    + L+YI   ++ G P +V + +   + F          +G    +P  + 
Sbjct: 49  KLSNSKILSKIALVYID--IVRGTPAVVQLMILANIIF----------VGALRETPILIV 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA    + A++AEI+R+G+  + +GQ EA  ALGL++ +  + V++PQA++ I+P L 
Sbjct: 97  AGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQTMKFVIIPQAVKKILPALV 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+++ LLK +S+   +G  DL+     I +QT + +E +L    IYL L+ +  + M ++
Sbjct: 157 SEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLAVGIIYLILTTIFTVLMRKV 216

Query: 389 NAKIALKE 396
              + + +
Sbjct: 217 EKGLKVSD 224


>gi|261493138|ref|ZP_05989673.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261495783|ref|ZP_05992219.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261308548|gb|EEY09815.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311193|gb|EEY12361.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 227

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 98/224 (43%), Gaps = 13/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                 +   +++      F+   ++ + ++L     +  F  +    L   YIS  +I 
Sbjct: 13  FWPMVQAAFLVSIPLAIASFIIGMLIAVAVALVRISPATGFFHRLLLWLVKGYIS--IIR 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I + +   +  P +G F             +  I  S    A+ +E +R+ + 
Sbjct: 71  GTPMLVQICIVF---YGLPAIGIF--------IDPIPAAIIGFSLNIGAYGSETIRAAIS 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ EA   +G+T+ +  R ++ PQA R  +PPL++ ++ L K++SLA  V   ++ 
Sbjct: 120 SVPKGQWEAGYTIGMTYMQTFRRIIAPQAFRVAVPPLSNTFIGLFKDTSLASVVTVTEMF 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            V   + N +   + + +    IY     ++ L   RL  +   
Sbjct: 180 RVAQQVANMSYDFLPVYIEAGLIYWCFCWVLFLIQARLEVRFNR 223


>gi|89094511|ref|ZP_01167450.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanospirillum sp. MED92]
 gi|89081247|gb|EAR60480.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanospirillum sp. MED92]
          Length = 244

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 13/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +                ++ +FS   G++L++    L R   +   +ALP  YI
Sbjct: 1   MSWEWDVIIEHFPRLLQGAILTLELVLFSGFAGLMLAVPL-ALMRVSSKPWIQALPFAYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAF 280
             F   G P L+ I L Y          QF FI  S + P     +    I  + +TAA+
Sbjct: 60  FFF--RGTPLLIQIFLVYYGS------SQFEFIKNSALWPILREPYWCAIITFALHTAAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE++R  + ++P+G++EAA ALG+++    R ++LP+A   ++P   ++ + +LK S+L
Sbjct: 112 IAELLRGAIQSIPKGEIEAAKALGMSYPMMLRRIILPRAFGIMMPAYGNEVILMLKGSAL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +   DL  +  TII +T   +EI L    IYL +S ++ L    L  +   
Sbjct: 172 ASTITLLDLTGMARTIIARTYTPLEIFLAAGVIYLIISALLILLFRFLEKRFNR 225



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L         ++   +   R+S+   +  +   Y+  FR  P L+ IF +
Sbjct: 15  LLQGAILTLELVLFSGFAGLMLAVPLALMRVSSKPWIQALPFAYIFFFRGTPLLIQIFLV 74

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y        I + ++  
Sbjct: 75  YYGSSQFEFIKNSALWP 91


>gi|183980096|ref|YP_001848387.1| ABC transporter permease protein GlnQ [Mycobacterium marinum M]
 gi|183173422|gb|ACC38532.1| ABC transporter permease protein GlnQ [Mycobacterium marinum M]
          Length = 589

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 16/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                          +     +     + + + ++G+ L   A  ++   H++  +    
Sbjct: 342 RDSFFDWDMYRQAIPTLFKTGLPNTLILTLSASIIGLALG-MALAIAGISHQRWLRWPAR 400

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y   F   GLP +V+I +          LG    +GG T +  +     AL     A++
Sbjct: 401 VYTDIF--RGLPEVVIILII--------GLGVGPIVGGLTNNNPYPLGIAALGLMAGAYV 450

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+RSG+ +V  GQ+EA+ ALG ++  A RLV++PQ +R ++P L +Q++ LLK S+L 
Sbjct: 451 GEILRSGIQSVDPGQLEASRALGFSYSAAMRLVVVPQGVRRVLPALVNQFIALLKASALV 510

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +G      +L  VG  +  QTG  +  ++     YL L++ +   +N ++A
Sbjct: 511 YFLGLIAQQRELFQVGRDLNAQTGN-LSPLVAAGIFYLMLTVPLTHLVNYIDA 562



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 65/199 (32%), Gaps = 20/199 (10%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G  NT  L  S  I    +G  +    +S  + + W  RVY ++FR +P +V+I  +
Sbjct: 359 FKTGLPNTLILTLSASIIGLALGMALAIAGISHQRWLRWPARVYTDIFRGLPEVVIILII 418

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG------------LSFPTLTMDTNAKIFVFSFVL 196
              V  ++    ++   P G+                  +          ++   FS+  
Sbjct: 419 GLGVGPIVGGLTNNNPYPLGIAALGLMAGAYVGEILRSGIQSVDPGQLEASRALGFSYSA 478

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            + L +    + R       + + LL  S  + F L  +      +Q+  D         
Sbjct: 479 AMRLVVVPQGVRRVLPALVNQFIALLKASALVYF-LGLIAQQRELFQVGRDLNAQTG--- 534

Query: 257 IGGSTVSPEFMSLYIALSC 275
                +SP   +    L  
Sbjct: 535 ----NLSPLVAAGIFYLML 549


>gi|154686658|ref|YP_001421819.1| YqiY [Bacillus amyloliquefaciens FZB42]
 gi|154352509|gb|ABS74588.1| YqiY [Bacillus amyloliquefaciens FZB42]
          Length = 219

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + F    +    KI + S V+G+VL +    L +       K +   Y 
Sbjct: 1   MNLDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVL-SLFKISTISPLKWIADFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + + Y   F  P L  F          +F +   ALS  +AA+++EI
Sbjct: 60  SIF--RGTPLVLQLMIIY---FGMPQLLGFQI-------DQFWAAVTALSLNSAAYVSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ A+ +GQ EAA+ALG+ + K  + +LLPQA ++I P + ++ + L K S++   +
Sbjct: 108 IRAGINAIDKGQKEAAVALGVPYGKMMKDLLLPQAFKNISPAIINELITLTKESAIVTVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++         T   +E +++   IY  L +++A     +  K+   +
Sbjct: 168 GLGDIMRRAYQSGAATYNYLEPLIVAGLIYYVLVLILAFIGKGVERKLKAND 219



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 34/88 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++       IL G   T  +     +   ++G ++   ++S    + WI   Y  +F
Sbjct: 3   LDFSATIPQIPFILEGLAVTLKIVLVSAVIGLVLGIVLSLFKISTISPLKWIADFYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           R  P ++ +  +Y  +  +L        
Sbjct: 63  RGTPLVLQLMIIYFGMPQLLGFQIDQFW 90


>gi|257451921|ref|ZP_05617220.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R]
 gi|317058472|ref|ZP_07922957.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R]
 gi|313684148|gb|EFS20983.1| amino acid ABC transporter permease [Fusobacterium sp. 3_1_5R]
          Length = 224

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 12/188 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +  + K    + L+YI   ++ G P +V + +   + F          +G    +P  + 
Sbjct: 49  KLSNSKILSKIALVYID--IVRGTPAVVQLMILANIIF----------VGALRETPILIV 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA    + A++AEI+R+G+  + +GQ EA  ALGL++ +  + V++PQA++ I+P L 
Sbjct: 97  AGIAFGMNSGAYVAEIIRAGIEGLEKGQTEAGRALGLSYAQTMKFVIIPQAVKKILPALV 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+++ LLK +S+   +G  DL+     I +QT + +E +L    IYL L+ +  + M ++
Sbjct: 157 SEFITLLKETSIVGFIGGVDLLRSANIITSQTYRGVEPLLAVGIIYLILTTVFTILMRKV 216

Query: 389 NAKIALKE 396
              + + +
Sbjct: 217 EKGLKVSD 224


>gi|160935369|ref|ZP_02082751.1| hypothetical protein CLOBOL_00264 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441727|gb|EDP19427.1| hypothetical protein CLOBOL_00264 [Clostridium bolteae ATCC
           BAA-613]
          Length = 215

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 18/221 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+  +  + + S +LG++  +  T  +R           +L I   L  
Sbjct: 10  YWRLLLDGFLITLKLSLTVIITSTLLGVICGMLFTLKNRGIRG-------VLRIYVELFR 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + Y                       F ++ +  + Y  A+IAEI+RSG+ 
Sbjct: 63  GCPLLMQLFMGYY-----------GLAYLGIQIDIFSAVVLVYTLYGGAYIAEIIRSGIE 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA  +GL      R V+LPQ+ +  +P L   +L L+K++S+A  +G+++L+
Sbjct: 112 SIPKGQWEAAKCIGLNPVDVLRDVVLPQSFKISLPALIGFHLGLIKDTSIASIIGYSELL 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G TI+N TG   E  ++   IY  +   ++ ++     K
Sbjct: 172 REGKTIMNVTGYPFETYILVAVIYFIICYPLSKYVGWTERK 212



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 41/77 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY   +L GF+ T  L+ + +I +T++G + G      N+ +  + R+YVE+FR  P L+
Sbjct: 9   SYWRLLLDGFLITLKLSLTVIITSTLLGVICGMLFTLKNRGIRGVLRIYVELFRGCPLLM 68

Query: 144 VIFFLYKSVLSVLPIPD 160
            +F  Y  +  +    D
Sbjct: 69  QLFMGYYGLAYLGIQID 85


>gi|254245536|ref|ZP_04938857.1| Amino acid permease [Burkholderia cenocepacia PC184]
 gi|124870312|gb|EAY62028.1| Amino acid permease [Burkholderia cenocepacia PC184]
          Length = 230

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               VF  +  +VL++   R S                L   Y+S  L+ G P LV I +
Sbjct: 26  VLSMVFGLLGAVVLAMMGIRQSEALDGFERIWVNALAWLARAYVS--LMRGTPLLVQIFV 83

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y   +  P L       G ++ P   +  IALS   AA+++E +R  +  + RGQ  AA
Sbjct: 84  IY---YGLPSL-------GISLDPT-PAGVIALSANVAAYMSESMRGAINGIARGQWLAA 132

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL+  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T
Sbjct: 133 YSLGLSWGQTLRYVIGPQALRIAVPSLSNSLISLIKDTSLVSVITVTELLRSAQEVIAAT 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            Q + + L    +Y  L  ++         +++L  + 
Sbjct: 193 YQPLPLCLAAAAVYWVLCQILEWVQRWYEKRLSLPSRH 230


>gi|240950021|ref|ZP_04754329.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus minor NM305]
 gi|240295499|gb|EER46242.1| hypothetical amino-acid ABC transporter permease protein
           [Actinobacillus minor NM305]
          Length = 238

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 13/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGL 232
                   +  +  + + SF++G+V+++    +           + L  +  ++  I G 
Sbjct: 24  FWPMVEAAVLVSIPLAIASFIIGMVIAVGVALIRVTPVNGVLHRIALAIVKVYISIIRGT 83

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I++ +   +  P +G F             +  I  S    A+ +E VR+ + +V
Sbjct: 84  PMLVQISVVF---YGLPAIGVF--------IDPIPAAIIGFSLNIGAYASETVRAAISSV 132

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   +G+T+ +  R ++ PQA+R  +PPL++ ++ L K++SLA  V   ++  V
Sbjct: 133 PKGQWEAGFTIGMTYMQTFRRIIAPQAVRVAVPPLSNTFIGLFKDTSLASVVTVTEMFRV 192

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              + N +   + + +    IY     ++     +L  +   
Sbjct: 193 AQQMANMSYDFLPVYIEAGLIYWCFCWVLFYIQAKLETRFNR 234


>gi|89893954|ref|YP_517441.1| hypothetical protein DSY1208 [Desulfitobacterium hafniense Y51]
 gi|89333402|dbj|BAE82997.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 253

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 18/193 (9%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ---LHFDKPVLGQFNFIGG 259
              R  +    K   AL   YI  F   G P +V   + Y    L FD  +   F     
Sbjct: 51  MPERGIKRILLKVVNALLASYIEFF--RGTPMIVQAMVIYYGSALAFDIHMNHIF----- 103

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                   +    +S  T A++AEIVR G+I++ +GQ EAA A+G+ H +    V+LPQ 
Sbjct: 104 --------AGIFIVSINTGAYMAEIVRGGIISIDKGQFEAAHAIGMNHIQTMFNVVLPQV 155

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R+I+P   ++++  +K++S+   +   +L     +I     +  E   +   +Y  ++ 
Sbjct: 156 IRNILPATGNEFVINIKDTSVLNVISVTELYFQTKSIAGNNFRYFEAFFVACILYFIMTF 215

Query: 380 MIALFMNRLNAKI 392
            +   +  +  ++
Sbjct: 216 TVTRILRYIERRM 228


>gi|330821002|ref|YP_004349864.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia gladioli BSR3]
 gi|327372997|gb|AEA64352.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia gladioli BSR3]
          Length = 601

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 11/242 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             +G+F            +     + +     G  L+L    L+R       +AL   YI
Sbjct: 64  WEWGVFAQWFFAPPVLDGLVKTLVLTLVGGTAGFALAL-PVALARLSASPLLRALAWGYI 122

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV--------SPEFMSLYIALSCY 276
             F    +P +VL+ L   L +    +       G  +           FM+  I L+  
Sbjct: 123 WLF--RSIPLIVLLLLLNNLGYLYETVHIAVPFTGHVLLDAPTTGLVTPFMAAAIGLTLS 180

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AAF AE +R GL++V  GQ EAA ALGL   +  R ++LPQAMRSI+P   +  + L K
Sbjct: 181 QAAFSAEAIRGGLLSVDHGQREAAAALGLPRGRQIRRIILPQAMRSILPAAFNDLVGLAK 240

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++S+   +   DL      I ++  + I ++++    YL +   ++     +    +   
Sbjct: 241 STSVVYILAMPDLFYTVQIIYHRNLEVIPLLMVATVWYLVILTGLSALQGLVERHFSRGA 300

Query: 397 KK 398
            +
Sbjct: 301 TR 302



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 26/54 (48%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           L G V T  L   G      +   V   RLSA+ L+  +   Y+ +FR+IP +V
Sbjct: 79  LDGLVKTLVLTLVGGTAGFALALPVALARLSASPLLRALAWGYIWLFRSIPLIV 132


>gi|303228628|ref|ZP_07315454.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516720|gb|EFL58636.1| putative glutamine ABC transporter, permease protein GlnP
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 218

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           ++V S   GI+L+L      R         +   ++  +L+ G P ++ I   Y   F  
Sbjct: 26  VWVLSIPGGIILALL-----RLSKLPVVDKIVEAFV--YLMRGTPLMLQILFMY---FAL 75

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P++       G+    +  +  +      AA++ EI R G+ ++PRGQ E A  LG T+ 
Sbjct: 76  PIMT-----DGAIQMDDATAAVVTFVLNYAAYLCEIFRGGIQSIPRGQYEGAKVLGFTYG 130

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQ  + ++PPL ++ +NLLK++SL   +   D++ +  +I+ +    I   L
Sbjct: 131 QTMRTIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD-ISAFL 189

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    YL  + ++    N L  + ++ +
Sbjct: 190 VAAIFYLIFTFILTNIFNYLEKRFSVYD 217



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L     + +   G ++   RLS   +V  I   +V + R  P ++ I F+
Sbjct: 12  IADGLKVTIALFCVVWVLSIPGGIILALLRLSKLPVVDKIVEAFVYLMRGTPLMLQILFM 71

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 72  YFALP 76


>gi|312196941|ref|YP_004017002.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311228277|gb|ADP81132.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 350

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 11/265 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +VV+  L +++  ++  P +        F     L    +T+   A   VF  + 
Sbjct: 61  RWIATVVVLVVLAQAIHGLVTNPFYQWDRFEYWFARPVILRGLLITLQVTAYSAVFGLLG 120

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVL 251
           GIVL+L      R       K++  LYI  F    L  +++    +      +    P  
Sbjct: 121 GIVLAL-----GRLSSNPVLKSVSWLYIWLFRSVPLIVVLIFLYNFGALYRTVSLGVPFG 175

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +F     + +  E     I +S   AA+ AE+VR+GL++V +GQ EAA ALGL      
Sbjct: 176 PRFLSFHEADLLGEMAIAVIGVSLNEAAYAAEVVRAGLLSVDQGQHEAAAALGLPRFYQF 235

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIW 370
           R ++LPQA+R+IIP   +Q + L+K +SL   V   D+     T+ +   G  I ++L+ 
Sbjct: 236 RRIVLPQALRAIIPSYVNQLIGLIKGTSLVFYVSLLDIFGKVQTMGSTYPGDVIPLLLVG 295

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
              Y+ L+ ++++    +    +  
Sbjct: 296 TAWYVILTSIVSVVQYYVERYYSRG 320



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 53/147 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  +     +   + G ++  GRLS+N ++  +  +Y+ +FR++P +VV+ F
Sbjct: 98  VILRGLLITLQVTAYSAVFGLLGGIVLALGRLSSNPVLKSVSWLYIWLFRSVPLIVVLIF 157

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           LY        +       P  +  +   L            +   ++   +V +   +  
Sbjct: 158 LYNFGALYRTVSLGVPFGPRFLSFHEADLLGEMAIAVIGVSLNEAAYAAEVVRAGLLSVD 217

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPT 234
                      LP  Y    ++     
Sbjct: 218 QGQHEAAAALGLPRFYQFRRIVLPQAL 244


>gi|228912174|ref|ZP_04075889.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
 gi|228847511|gb|EEM92450.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
          Length = 193

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 61/203 (30%), Positives = 111/203 (54%), Gaps = 15/203 (7%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            + SFV+GI L++     +++ +     ++  +YIS F   G P LV +   + L+F  P
Sbjct: 1   MIISFVIGIGLAIITKNKTKYLY-----SIARVYISFF--RGTPLLVQL---FVLYFGLP 50

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +         TV     +  I LS   AA+++EI+R  L AV  GQM+A +++G+T  +
Sbjct: 51  QI-----FPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTKAQ 105

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A R ++ PQA+R  +P L + ++ LLK SSL+ A+G A++++    +  Q+ + +E  L 
Sbjct: 106 AMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKMLAAQSYRYMESYLA 165

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              +Y  ++I+I+    +L  K+
Sbjct: 166 VAIVYWIITIVISWGQKKLEKKL 188


>gi|30018826|ref|NP_830457.1| glutamine transport system permease protein glnP [Bacillus cereus
           ATCC 14579]
 gi|229126072|ref|ZP_04255094.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-Cer4]
 gi|29894368|gb|AAP07658.1| Glutamine transport system permease protein glnP [Bacillus cereus
           ATCC 14579]
 gi|228657394|gb|EEL13210.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-Cer4]
          Length = 218

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 119/220 (54%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 13  MYLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRI----------LNWIGSAFVEFVR 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTA FIAE++R+G+++V 
Sbjct: 63  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTATFIAEVIRAGILSVA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +A   V+LPQA++ ++PPL +Q+LNL+KNSS+   +  ADL+  G
Sbjct: 115 KGQMEAARSSGLTYVQAMYYVVLPQAVKIVVPPLGNQFLNLVKNSSILGIIAGADLMYQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L+I +++ +  L  ++A
Sbjct: 175 DLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRLA 214



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R++  +++ WI   +VE  RNIP +++ F  
Sbjct: 14  YLEGFKYTVMSSVIALIGSFILGVILAVMRIAPIRILNWIGSAFVEFVRNIPLVLIAFIF 73

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 74  YFALP 78


>gi|229083652|ref|ZP_04215977.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-44]
 gi|228699670|gb|EEL52330.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-44]
          Length = 230

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 98/188 (52%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  LYI   +I G P +V I + Y              I    V   F +
Sbjct: 41  RISNNKILNSIAHLYI--AVIRGTPLIVQIMILY------------FGITSIVVLSPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+++  A R ++LPQA+R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQALRLSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     + +E  ++    YL+L ++    ++ L
Sbjct: 147 NQFVIGLKDSSLVAYVGMSELWGSGLSIAAGNFKQLETYIVVSAYYLALVLLFTYLVSLL 206

Query: 389 NAKIALKE 396
             ++  K+
Sbjct: 207 EKRLQRKQ 214


>gi|227512776|ref|ZP_03942825.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus buchneri ATCC 11577]
 gi|227522900|ref|ZP_03952949.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
 gi|227083976|gb|EEI19288.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus buchneri ATCC 11577]
 gi|227089929|gb|EEI25241.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus hilgardii ATCC 8290]
          Length = 235

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 19/224 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    V S++ G++L +      ++     G          F+I  +  L
Sbjct: 17  LEGAWVTILVSVCSIVLSYIFGVILGVTRYVQIKYLSAIVG----------FVIDIIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            LI + +  +F  P L                +  IA++ + AA +AEIVR+G++++P G
Sbjct: 67  PLILIIFFTYFGLPHL--------GFKPDPIWASVIAMAVFEAAMVAEIVRAGIVSIPTG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A A GL++ +A   ++LPQA+R++IP + SQ+++L+K++SLA  +   DL++    
Sbjct: 119 QMEGARANGLSYWQALWYIVLPQAIRNMIPAIVSQFISLVKDTSLATIIVLPDLMNHAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I  Q T   I + L    +Y  +   ++LF   L  +I    KK
Sbjct: 179 IYGQNTNYTIPMFLALAVMYFIVCYSLSLFSKYLEKRIGGGNKK 222



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 37/82 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   ++ + I G ++G  R    K ++ I    +++ RN+P 
Sbjct: 9   SWVNIKFLLEGAWVTILVSVCSIVLSYIFGVILGVTRYVQIKYLSAIVGFVIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           +++IFF Y  +  +   PD   
Sbjct: 69  ILIIFFTYFGLPHLGFKPDPIW 90


>gi|56421989|ref|YP_149307.1| amino acid ABC transporter permease [Geobacillus kaustophilus
           HTA426]
 gi|56381831|dbj|BAD77739.1| amino acid ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
          Length = 218

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 114/231 (49%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +      +    +     + +   V G++L LF   L +       +     YI
Sbjct: 1   MDFRFDIIVEYAPYFWQGLLVTIGVSLAGIVFGLILGLFIG-LGKMSSNPIIRLPFSWYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F   G P +V I L   +HF    L                SL ++LS  +AA++AEI
Sbjct: 60  NFF--RGTPLVVQILL---VHFGAMPLF-------FAQPNAVASLAVSLSLNSAAYVAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQMEAA +LG+TH +A R ++LPQA++ +IPP  ++++ L+K+SSL + +
Sbjct: 108 FRAGIQSIDKGQMEAARSLGMTHAQAMRYIILPQALKRMIPPFANEFIVLIKDSSLGMVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +++  G     +  +  E  L   FIYL L++ ++   + L  K + +
Sbjct: 168 AAPEIMYWGKAAAGEYYRVWEPYLTVAFIYLLLTLSLSKLSHYLERKYSTQ 218



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 35/69 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA     G + T  ++ +G++   I+G  +G G++S+N ++      Y+  FR  P +V 
Sbjct: 11  YAPYFWQGLLVTIGVSLAGIVFGLILGLFIGLGKMSSNPIIRLPFSWYINFFRGTPLVVQ 70

Query: 145 IFFLYKSVL 153
           I  ++   +
Sbjct: 71  ILLVHFGAM 79


>gi|225075407|ref|ZP_03718606.1| hypothetical protein NEIFLAOT_00412 [Neisseria flavescens
           NRL30031/H210]
 gi|224953225|gb|EEG34434.1| hypothetical protein NEIFLAOT_00412 [Neisseria flavescens
           NRL30031/H210]
          Length = 248

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 54/181 (29%), Positives = 92/181 (50%), Gaps = 7/181 (3%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHF-------DKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           ++   L  G P L  + +   + F       D  ++     I         ++  +AL  
Sbjct: 67  FVYVALFRGTPLLAQVIIWAFVIFPFFVHPTDGALISGEAAINFRRSYGPLIAGVMALIA 126

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A++ EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PPL  +++ LL
Sbjct: 127 NSGAYVCEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPPLAGEFITLL 186

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+SSL   +   +L+SV   I  Q     E +     IYL L+ ++     RL  +  +K
Sbjct: 187 KDSSLLSVIAVPELMSVQKAITGQYSIFQEPLYTVALIYLVLTSVLGWVFLRLERRYNVK 246

Query: 396 E 396
            
Sbjct: 247 H 247


>gi|288555859|ref|YP_003427794.1| ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288547019|gb|ADC50902.1| ABC transporter (permease) [Bacillus pseudofirmus OF4]
          Length = 218

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 102/226 (45%), Gaps = 18/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+   +   +   +LGI+L++      +       +     Y S F   
Sbjct: 11  HIPFILKGIGVTLQFVSTSLLVGLILGIILAIM-----KIGKIAVLRWFAHAYTSVF--R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ +++ Y                       F++  +A    ++A+++EI+R+G+ 
Sbjct: 64  GTPLILQLSIIYY-----------GAPQFGIEMSAFLAGVLAFGLNSSAYVSEIIRAGIQ 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EAA ALG+  R     ++LPQA R+I+P L ++++NL K S++   +G  D++
Sbjct: 113 AVDKGQKEAAAALGIPERPMMIRIILPQAFRNILPALFNEFINLTKESAIVSIIGVWDIM 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +  Q  +  E +L    IY  + +++ +    +  ++   +
Sbjct: 173 RRAQMVNAQIYKYFEALLFVGLIYYVMVMVLTIIGRMIERRLQRSD 218



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 36/111 (32%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     +   IL G   T     + ++   I+G ++   ++    ++ W    Y  VF
Sbjct: 3   IDFRVIEPHIPFILKGIGVTLQFVSTSLLVGLILGIILAIMKIGKIAVLRWFAHAYTSVF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R  P ++ +  +Y             +       LN+       +     A
Sbjct: 63  RGTPLILQLSIIYYGAPQFGIEMSAFLAGVLAFGLNSSAYVSEIIRAGIQA 113


>gi|269954910|ref|YP_003324699.1| polar amino acid ABC transporter inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
 gi|269303591|gb|ACZ29141.1| polar amino acid ABC transporter, inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
          Length = 318

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 12/238 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              ++L  R +        T    F  S  L + +++    + R       + +   YI 
Sbjct: 45  WDTVWLYWRDIVVIRGIGWTLVLTF-GSMALAVTMAILL-AVMRRSDNPVMRGVSWFYIW 102

Query: 226 TFLIFGLPTLVLI-------ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            F   G P  V +        L   L    P   +F       V   F +  + L+   A
Sbjct: 103 FF--RGTPVFVQLTFWGLLSVLYPTLGLGIPFGPEFVTFETKAVVTVFWAALLGLAFNEA 160

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEIVR+GL +V  GQ EAA ALG+      R ++LPQAMR I+PP  ++ +++LK +
Sbjct: 161 AYLAEIVRAGLTSVDPGQAEAAKALGMKDTTILRRIVLPQAMRVIVPPTGNETISMLKTT 220

Query: 339 SLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           SL +AV F  DL      I N+  Q I ++++    YL ++ ++ +  + L       
Sbjct: 221 SLVIAVPFTLDLFYATSAIGNRLYQPIPLLVVASIWYLVITSILMVGQSYLEKYYGRG 278



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 45/142 (31%), Gaps = 9/142 (6%)

Query: 79  YTSDSSYATAILV--GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +   Y   I+V  G   T  L F  M  A  +  L+   R S N ++  +   Y+  F
Sbjct: 45  WDTVWLYWRDIVVIRGIGWTLVLTFGSMALAVTMAILLAVMRRSDNPVMRGVSWFYIWFF 104

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R  P  V + F     +           L  G+      ++F T  + T     +     
Sbjct: 105 RGTPVFVQLTFWGLLSVLYP-------TLGLGIPFGPEFVTFETKAVVTVFWAALLGLAF 157

Query: 197 GIVLSLFATRLSRHFHEKTGKA 218
                L     +       G+A
Sbjct: 158 NEAAYLAEIVRAGLTSVDPGQA 179


>gi|205375469|ref|ZP_03228257.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coahuilensis m4-4]
          Length = 219

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 17/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F F+LGI+L+ F     +    K  K   + Y S F   G P ++ IAL Y   F
Sbjct: 27  VLSTFFGFLLGIILAFF-----KISTIKPLKWFGIAYTSIF--RGTPLILQIALIY---F 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L +++           ++  IA +  +AA+I+E +R G++AV +GQ EAA++LG+ 
Sbjct: 77  ATPQLLRYDI-------DPLLAGVIAFALNSAAYISETIRGGILAVDKGQREAAMSLGVP 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +RK    +++PQA++ I+P L ++ + LLK S+L   +G  DL+     + ++T    E 
Sbjct: 130 YRKMMWHIVMPQAVKKILPALANESIALLKESALVSTIGAMDLLRRATIVSSKTFLYFEP 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++   I+  + +++      L  ++ + +
Sbjct: 190 LILVGGIFYVMVLILTSGARYLERRMQVSD 219



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     Y   I+ G + T            ++G ++   ++S  K + W    Y  +F
Sbjct: 3   LQFDKIVPYIPFIVEGILVTLKFTVLSTFFGFLLGIILAFFKISTIKPLKWFGIAYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ I  +Y +   +
Sbjct: 63  RGTPLILQIALIYFATPQL 81


>gi|161870370|ref|YP_001599540.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis 053442]
 gi|161595923|gb|ABX73583.1| amino acid ABC transporter, permease protein [Neisseria
           meningitidis 053442]
          Length = 213

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + + LLY++ F   G P  V I +   + F   V             I         
Sbjct: 25  WALRKVSLLYVTLF--RGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPL 82

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PP
Sbjct: 83  IAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQAMRYVILPQALRRMLPP 142

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     
Sbjct: 143 LASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTVALIYLLMTTFLGWIFL 202

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 203 RLEKRYNPQHR 213


>gi|163751503|ref|ZP_02158726.1| amino acid ABC transporter, permease protein [Shewanella benthica
           KT99]
 gi|161328624|gb|EDP99774.1| amino acid ABC transporter, permease protein [Shewanella benthica
           KT99]
          Length = 225

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 106/210 (50%), Gaps = 15/210 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +  F+ +LG VL +  T   +       +    LY+   +I G P ++ + + Y +  
Sbjct: 31  LTVTFFAMILGAVLGVATT-FMKMSDHWFWRWPANLYVG--VIRGTPVVIQLVILYFIVL 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +G               +  IA    + A+I+EI+R+G+ AV +GQ EAA +LGL+
Sbjct: 88  SALDVGVIG------------AAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLGLS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  + V+LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +A   
Sbjct: 136 QRQTMQEVILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEAEVP 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     IYL L+      +++L  ++   +
Sbjct: 196 LFTCALIYLVLTYGFTFMLSKLELRLKQSD 225



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G  +T  + F  MI   ++G      ++S +    W   +YV V R  P ++ +  L
Sbjct: 23  ILEGLKSTLTVTFFAMILGAVLGVATTFMKMSDHWFWRWPANLYVGVIRGTPVVIQLVIL 82

Query: 149 YKSVLSV 155
           Y  VLS 
Sbjct: 83  YFIVLSA 89


>gi|71064875|ref|YP_263602.1| ABC basic amino acid transporter, inner membrane subunit
           [Psychrobacter arcticus 273-4]
 gi|71037860|gb|AAZ18168.1| ABC basic amino acid transporter, inner membrane subunit
           [Psychrobacter arcticus 273-4]
          Length = 241

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 4/230 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +    +           ++ +FS V+G+   L    L R       + LP LYI
Sbjct: 1   MDWNWQVIFDHIPDLLGGAVLTVQLVIFSGVIGLFFGLVL-ALLRLSKNWMVQILPFLYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV I L Y     +    + +F+    +S  +    IA +  T+A++AEI
Sbjct: 60  FFF--RGTPLLVQIFLIYY-GLGQFEAVRESFLWEPVLSQAYWCAIIAFTLNTSAYLAEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  +P G++EAA A+G++  +    + LP+A   +IP  +++ + +LK S+LA  +
Sbjct: 117 IRGAIQNIPVGELEAADAIGMSKWQKLTRITLPRAFGIVIPVYSNEVIFMLKGSALASTI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              D+  V  TI  +T   +E+      +YL LS +I         ++  
Sbjct: 177 ALMDITGVARTISARTYTLMELFFAAGIVYLLLSWVILFSFRMFEKRMNR 226



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 41/113 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L     +     G ++   RLS N +V  +  +Y+  FR  P LV IF +
Sbjct: 15  LLGGAVLTVQLVIFSGVIGLFFGLVLALLRLSKNWMVQILPFLYIFFFRGTPLLVQIFLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y  +     + +  +  P         +   TL         +   +  I + 
Sbjct: 75  YYGLGQFEAVRESFLWEPVLSQAYWCAIIAFTLNTSAYLAEIIRGAIQNIPVG 127


>gi|319651467|ref|ZP_08005595.1| YqiY protein [Bacillus sp. 2_A_57_CT2]
 gi|317396782|gb|EFV77492.1| YqiY protein [Bacillus sp. 2_A_57_CT2]
          Length = 219

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 17/224 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   +   +  FVLGI+LS F     +    K    +   Y S F   G 
Sbjct: 13  PYILKGIGVTLQIVSMAGILGFVLGIILSFF-----KISRFKILGWIADAYTSVF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ + L Y   +  P L  +             +  ++    +AA+I+EI+R+G++AV
Sbjct: 66  PLVLQLMLIY---YGSPQLIGYKIDPS-------TAAVLSFGLNSAAYISEIIRAGILAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA+ALG+ +R A   ++LPQAM++I+P L ++++ L K S++   +G  D++  
Sbjct: 116 DKGQSEAAMALGVPYRPAMMDIILPQAMKNILPALMNEFITLTKESAIVTVIGVTDVMRR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +     E ILI   IY  + +++ +    +  ++   +
Sbjct: 176 AYIVGGEKFSYFEPILIAGLIYYIMVMILTVLGKGIERRMRRSD 219



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 3/96 (3%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +         IL G   T  +     I   ++G ++   ++S  K++ WI   Y  VF
Sbjct: 3   LDFQQFVPSLPYILKGIGVTLQIVSMAGILGFVLGIILSFFKISRFKILGWIADAYTSVF 62

Query: 137 RNIPPLVVIFFLYKSVLSVL---PIPDHSIVLPFGM 169
           R  P ++ +  +Y     ++     P  + VL FG+
Sbjct: 63  RGTPLVLQLMLIYYGSPQLIGYKIDPSTAAVLSFGL 98


>gi|104784121|ref|YP_610619.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95113108|emb|CAK17836.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 229

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +ALP  YI  F   G P 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAIPLG-IARSSRHWYVRALPYGYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF+ +  S++ P     F    + ++ +TAA+IAEI+R  L 
Sbjct: 66  LVQLFLVYY------GLAQFDLVRDSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PRG++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 120 AIPRGEIEAARALGMSRGKALFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T   +EI       YL +S  +      L   + +
Sbjct: 180 GMARTIIARTYLPVEIFFAAGVFYLLISFFLVQGFKLLERWLRV 223



 Score = 43.0 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 5/142 (3%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   I+   +G  R S +  V  +   Y+  FR  P LV 
Sbjct: 9   WLPRLAQGATLTLELVAIAVIAGLILAIPLGIARSSRHWYVRALPYGYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  +     + D S+                 LTM  +   ++   + G + ++  
Sbjct: 69  LFLVYYGLAQFDLVRDSSLWPYL-----RDPFWCTVLTMTLHTAAYIAEILRGALQAIPR 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
             +         +   L YI  
Sbjct: 124 GEIEAARALGMSRGKALFYIML 145


>gi|57504978|ref|ZP_00370930.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|305432022|ref|ZP_07401189.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|57019250|gb|EAL55956.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|304445106|gb|EFM37752.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 250

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 18/252 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L  +   +         P         +   +  +S    T++ +    + + V G +  
Sbjct: 11  LRQLLSSWGLYDESSTNPFAIWKFLDALDNGDAFISGFIYTLEVSILALLIAIVFGTIGG 70

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           + A         K  +A   +Y+  F       + L+   + L+F  P        G   
Sbjct: 71  VMA-----TSKIKILRAYTRVYVELF-----QNIPLVIQIFFLYFALP--------GLGI 112

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F    + +  Y  A+++E+VRSG+++VPRGQ EA+ + G T+ +  R +++PQ ++
Sbjct: 113 HLDIFTIGVLGIGAYHGAYVSEVVRSGILSVPRGQFEASASQGFTYVQQMRYIIVPQTIK 172

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP+T+Q +NL+KN+S+ + +G A+L+    +     G      +    +Y  +   +
Sbjct: 173 IILPPMTNQMVNLIKNTSVLLIIGGAELMHSADSYAADYGNYAPAYIFAAILYFIICYPL 232

Query: 382 ALFMNRLNAKIA 393
           A F      K+ 
Sbjct: 233 AYFAKVYEDKLK 244



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 47/95 (49%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +        A + GF+ T  ++   ++ A + GT+ G    S  K++    RVYVE+F+N
Sbjct: 34  FLDALDNGDAFISGFIYTLEVSILALLIAIVFGTIGGVMATSKIKILRAYTRVYVELFQN 93

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           IP ++ IFFLY ++  +    D   +   G+   +
Sbjct: 94  IPLVIQIFFLYFALPGLGIHLDIFTIGVLGIGAYH 128


>gi|260430199|ref|ZP_05784173.1| ABC transporter permease protein [Citreicella sp. SE45]
 gi|260418671|gb|EEX11927.1| ABC transporter permease protein [Citreicella sp. SE45]
          Length = 221

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 13/221 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +    +I++ S V+G++        +R       +   L+Y+  F     P 
Sbjct: 13  NWIVLLRGLWVTIQIWIPSIVIGLMGGFLL-AQARLARRGWIRGTSLVYVELF--RDTPV 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ +   Y           F  + G  +SP + +  + L+  T+A+ +EI R G+ ++ R
Sbjct: 70  LIQLIWFYY---------AFPILVGVQLSP-YAAALLGLTLNTSAYASEIFRGGIRSIHR 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A+A+G++  +A R V+LPQ ++ ++   T++ + + K SSLA  +   +L+  G 
Sbjct: 120 GQMEGALAIGMSRAQAMRRVILPQVIKRMLAAFTNRTIEVAKMSSLASVISVHELMYQGR 179

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + +   +  EI+    FIY  L         RL   +A  
Sbjct: 180 LLSSTYYRPFEILTAVAFIYFVLIYPGTFLAGRLEKHLARS 220



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 33/76 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++  +     +L G   T  +    ++   + G L+   RL+    +     VYVE+FR
Sbjct: 6   DFSIVTDNWIVLLRGLWVTIQIWIPSIVIGLMGGFLLAQARLARRGWIRGTSLVYVELFR 65

Query: 138 NIPPLVVIFFLYKSVL 153
           + P L+ + + Y +  
Sbjct: 66  DTPVLIQLIWFYYAFP 81


>gi|257866173|ref|ZP_05645826.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872504|ref|ZP_05652157.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257875808|ref|ZP_05655461.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|325570408|ref|ZP_08146185.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|257800107|gb|EEV29159.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806668|gb|EEV35490.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257809974|gb|EEV38794.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|325156618|gb|EGC68795.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 215

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 113/225 (50%), Gaps = 18/225 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + +     T+  +     FS ++G ++++F     +    +  K +   Y+  F   
Sbjct: 8   YTGQFIEGFKYTVMASLIALFFSLLIGTLMAIF-----QLSDNRLIKGIAKAYVEFFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  +V+       +   P+               F +  I L+ YT+AFIAE +RSG+ 
Sbjct: 63  PLLIIVMFF-----YVVVPMYW--------VSFDGFQAGTIGLTIYTSAFIAETIRSGIQ 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP+GQMEA+++ G T+ +A R ++LPQA + ++PPL +Q++NL+KNSS+   V   D++
Sbjct: 110 TVPKGQMEASLSSGFTYSQAMRYIILPQAFKIVVPPLGNQFINLVKNSSILAMVAGLDIM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             G  I ++T    +  +I    YL +++ ++  M  L  + A++
Sbjct: 170 YQGDLIASETFNTFDTYIIVGLFYLIITLPLSYLMVYLERRWAVR 214



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 43/94 (45%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y    + GF  T   +   +  + +IGTL+   +LS N+L+  I + YVE FRNIP L
Sbjct: 6   QTYTGQFIEGFKYTVMASLIALFFSLLIGTLMAIFQLSDNRLIKGIAKAYVEFFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +++ F Y  V       D       G+ +     
Sbjct: 66  IIVMFFYVVVPMYWVSFDGFQAGTIGLTIYTSAF 99


>gi|299541711|ref|ZP_07052041.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725806|gb|EFI66440.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 219

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 104/223 (46%), Gaps = 13/223 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             + +    +    +I + + ++G ++ +    L +       +     Y S F   G P
Sbjct: 10  PSIPYILKGIGVTLQIAIGASIIGFIVGILL-ALCKIGKVNFLRWFADFYTSIF--RGTP 66

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ + + Y   +  P L                +  IA    + A+I+EI+R+G+ AV 
Sbjct: 67  LVLQLLIIY---YAVPQL-------LDIQIDPIPTAIIAFGLNSGAYISEIIRAGINAVD 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA ALG+ + K  + +++PQA+++I+P L ++++ L K +++   +   D++   
Sbjct: 117 KGQMEAAQALGIPYAKMMKDIIIPQAVKNILPSLVNEFITLNKETAVVTVISALDIMRRA 176

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   T + +E +L    IY  +++++     R+   +   +
Sbjct: 177 YIVGGSTYRYLEPLLFAGVIYYIMTLVLTFLGKRIEKGMRKSD 219



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T+       IL G   T  +A    I   I+G L+   ++     + W    Y  +F
Sbjct: 3   LDFTAIVPSIPYILKGIGVTLQIAIGASIIGFIVGILLALCKIGKVNFLRWFADFYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y +V  +
Sbjct: 63  RGTPLVLQLLIIYYAVPQL 81


>gi|266619128|ref|ZP_06112063.1| L-cystine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288869357|gb|EFD01656.1| L-cystine ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 225

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + SF LG++L+ F T + R    K        Y+  ++I G P 
Sbjct: 12  FWPLMKAGLKMTVPLTLISFALGMILA-FITAMCRISKNKLLSKTAQFYV--WVIRGTPM 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V + + +                   +    +S  I L+    A+ +EI+R+ L ++P+
Sbjct: 69  IVQLFVIFY-----------GLPKVGIMFSPIVSAIIGLTISEGAYDSEIIRAALTSIPK 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA  ALG++  +    V++PQA    +P L + +++L+K++SL   +   ++  +G 
Sbjct: 118 GQWEACHALGMSKFQTLSNVIIPQAALIAVPSLGNMFISLVKDTSLTAILTVREVFQIGQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I+  T + + I L    IYL  S +++     L  K+ 
Sbjct: 178 QIVAVTFEPLWIYLEVGLIYLIYSTVLSQLQGVLERKLG 216



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 38/90 (42%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SS+   +  G   T  L         I+  +    R+S NKL++   + YV V R  P +
Sbjct: 10  SSFWPLMKAGLKMTVPLTLISFALGMILAFITAMCRISKNKLLSKTAQFYVWVIRGTPMI 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  +  V  +    +    G+ ++
Sbjct: 70  VQLFVIFYGLPKVGIMFSPIVSAIIGLTIS 99


>gi|91209896|ref|YP_539882.1| arginine transporter permease subunit ArtQ [Escherichia coli UTI89]
 gi|110641063|ref|YP_668793.1| arginine transporter permease subunit ArtQ [Escherichia coli 536]
 gi|117623042|ref|YP_851955.1| arginine transporter permease subunit ArtQ [Escherichia coli APEC
           O1]
 gi|191172131|ref|ZP_03033675.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           F11]
 gi|218557766|ref|YP_002390679.1| arginine transporter permease subunit ArtQ [Escherichia coli S88]
 gi|218688644|ref|YP_002396856.1| arginine transporter permease subunit ArtQ [Escherichia coli ED1a]
 gi|237707174|ref|ZP_04537655.1| arginine transporter permease subunit ArtQ [Escherichia sp.
           3_2_53FAA]
 gi|300991844|ref|ZP_07179669.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|306812689|ref|ZP_07446882.1| arginine transporter permease subunit ArtQ [Escherichia coli NC101]
 gi|91071470|gb|ABE06351.1| arginine 3rd transport system permease protein [Escherichia coli
           UTI89]
 gi|110342655|gb|ABG68892.1| arginine transport system permease protein ArtQ [Escherichia coli
           536]
 gi|115512166|gb|ABJ00241.1| arginine 3rd transport system permease protein [Escherichia coli
           APEC O1]
 gi|190907658|gb|EDV67253.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           F11]
 gi|218364535|emb|CAR02217.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli S88]
 gi|218426208|emb|CAR07032.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli ED1a]
 gi|226898384|gb|EEH84643.1| arginine transporter permease subunit ArtQ [Escherichia sp.
           3_2_53FAA]
 gi|294493134|gb|ADE91890.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           IHE3034]
 gi|300305454|gb|EFJ59974.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|305853452|gb|EFM53891.1| arginine transporter permease subunit ArtQ [Escherichia coli NC101]
 gi|307627729|gb|ADN72033.1| arginine transporter permease subunit ArtQ [Escherichia coli UM146]
 gi|315287306|gb|EFU46717.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315299389|gb|EFU58641.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|320196643|gb|EFW71266.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           WV_060327]
 gi|323953434|gb|EGB49300.1| inner membrane transport system [Escherichia coli H252]
 gi|323958151|gb|EGB53860.1| inner membrane transport system [Escherichia coli H263]
 gi|324009772|gb|EGB78991.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324013024|gb|EGB82243.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 238

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAVIYLVITLLSQYILKRIDLRATRFERR 236


>gi|323489287|ref|ZP_08094519.1| amino acid ABC transporter (permease) [Planococcus donghaensis
           MPA1U2]
 gi|323397174|gb|EGA89988.1| amino acid ABC transporter (permease) [Planococcus donghaensis
           MPA1U2]
          Length = 236

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 14/224 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+     + + SF+L  +     T L+R    K  + +  +Y+S  +I G P 
Sbjct: 27  FLPLIEATLQFTLPLSIISFIL-GLALAVLTALARISTVKIFQIIARVYVS--IIRGTPL 83

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + +   L +  P L       G T+ P F +  I  S    A+ +E++R+ ++++P+
Sbjct: 84  LVQLFI---LFYGLPTL-------GITIDP-FPAAVIGFSLNVGAYASEVIRAAILSIPK 132

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  +G+++ ++ R V+LPQA R  +PPL++ +++L+K++SLA  +   ++  V  
Sbjct: 133 GQWEAAGTIGMSYTQSLRRVILPQASRVSLPPLSNTFISLVKDTSLASLILVTEMFRVAQ 192

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            I     + + +      +Y  +   ++L   RL  +      +
Sbjct: 193 QIAATNYEFLLLYGQAALLYWVICFALSLVQGRLENRFDRYISR 236


>gi|50914605|ref|YP_060577.1| arginine ABC transporter permease [Streptococcus pyogenes
           MGAS10394]
 gi|50903679|gb|AAT87394.1| Arginine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
          Length = 228

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F             +T+  +  +  F  ++G++++L      +  H K    +  L
Sbjct: 1   MDLSFLPKYWAYFNYGVLVTIMISVSVVFFGTLIGVLVTLI-----KRSHVKPLTWVVNL 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+      F  +         +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMHFNNMPTIGFGVLD--FDFSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   +++  T   I  +L+  F YL ++ ++A  +  L   +A
Sbjct: 172 QTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMA 223



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++ S +   T+IG LV   + S  K + W+  +YV +FR  P +V 
Sbjct: 9   YWAYFNYGVLVTIMISVSVVFFGTLIGVLVTLIKRSHVKPLTWVVNLYVWIFRGTPMVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           I   +  +           VL F  
Sbjct: 69  IMIAFAWMHFNNMPTIGFGVLDFDF 93


>gi|78357807|ref|YP_389256.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220212|gb|ABB39561.1| amino acid ABC transporter membrane protein 2, PAAT family / amino
           acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 596

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/251 (23%), Positives = 113/251 (45%), Gaps = 18/251 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ F +  +   +                  GL     ++         SF +G+ + L 
Sbjct: 355 LMGFEWSVIADNISALLIWHFPNGSENEIFMGLGGLASSLLMALIAISVSFFIGLAVGLG 414

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
               +R F     +   L+YI            LI + + ++F  PV+    F       
Sbjct: 415 RCARNRIF-----RLPCLVYIEIIRGNP-----LIIVIFWIYFFLPVVFGAYF------- 457

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F S  IAL+ +T A++AEIVR+G+  +P GQ+EAA + GL++ +  R ++LPQA++ +
Sbjct: 458 DVFWSATIALTVFTGAYLAEIVRAGVQNIPAGQVEAAYSTGLSYFQTMRRIVLPQALKQM 517

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           IP +  Q++ + K++SLA  +G  +L  V   + N+      EI      +Y      ++
Sbjct: 518 IPAIVGQFIAIFKDTSLAFVIGVLELTFVAQGLDNRLMVYPFEIWTTVAVLYFVCCYAMS 577

Query: 383 LFMNRLNAKIA 393
           ++  RL  +++
Sbjct: 578 VYAARLERRLS 588



 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 5/268 (1%)

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           W+ + +V+        ++  + +  V +     + S++            +     + T 
Sbjct: 5   WLDKTWVQYTLLCTTTLLGIYYFGWVFNFGYQFEWSVLYTQNETYKLNLGAEMLRGLVTT 64

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + S  L + L      L+R    +  +    + +  F     P LV +   Y    
Sbjct: 65  VNISLISSALALGLGTMLG-LARLSAFRPLRISASVVVEFF--RNTPLLVQLFFWYFAF- 120

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              VL +         + EF     AL  YT +F+AE++R+GL ++P+G +EAA + GL+
Sbjct: 121 -PNVLPEAARQWVFEQNFEFWCAVSALGVYTGSFMAEVIRAGLQSIPKGLLEAAYSSGLS 179

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    ++LP A R+IIPPL S++LN +KNSSLA+ +G A+L      + + T +  E 
Sbjct: 180 YFQVLTRIILPLAFRTIIPPLGSEFLNNMKNSSLAMVIGVAELTWHSQQVQSLTFRGFEA 239

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 +YLSLS++I+  MN +N K+ L
Sbjct: 240 TTAATVLYLSLSLIISFIMNGVNGKLRL 267



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 6/138 (4%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSY----ATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
            G++    G++ +  ++ YT + +Y       +L G V T  ++      A  +GT++G 
Sbjct: 27  FGWVFN-FGYQFEWSVL-YTQNETYKLNLGAEMLRGLVTTVNISLISSALALGLGTMLGL 84

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            RLSA + +     V VE FRN P LV +FF Y +  +VLP      V            
Sbjct: 85  ARLSAFRPLRISASVVVEFFRNTPLLVQLFFWYFAFPNVLPEAARQWVFEQNFEFWCAVS 144

Query: 177 SFPTLTMDTNAKIFVFSF 194
           +    T    A++     
Sbjct: 145 ALGVYTGSFMAEVIRAGL 162


>gi|93005160|ref|YP_579597.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92392838|gb|ABE74113.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 241

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 4/230 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +    +           ++ +FS ++G+   L    L R       +  P LYI
Sbjct: 1   MDWNWQVIFDHIPDLLGGAVLTVQLVLFSGIIGLFFGLVL-ALLRLSKNWVVQIFPFLYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV I L Y     +    + +F+    +S  +    IA +  T+A++AEI
Sbjct: 60  FFF--RGTPLLVQIFLIYY-GLGQFEAVRNSFLWEPVLSQAYWCAIIAFTLNTSAYLAEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  +P G++EAA A+G++  +    + LP+A   +IP  +++ + +LK S+LA  +
Sbjct: 117 IRGAIQNIPVGELEAADAIGMSKWQKLTRITLPRAFGIVIPAYSNEVIFMLKGSALASTI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              D+  V  TI  +T   +E+      +YL LS +I         ++  
Sbjct: 177 ALMDITGVARTISARTYTLMELFFAAGIVYLLLSWVILFSFRMFEKRMNR 226



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 40/113 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L     I     G ++   RLS N +V     +Y+  FR  P LV IF +
Sbjct: 15  LLGGAVLTVQLVLFSGIIGLFFGLVLALLRLSKNWVVQIFPFLYIFFFRGTPLLVQIFLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y  +     + +  +  P         +   TL         +   +  I + 
Sbjct: 75  YYGLGQFEAVRNSFLWEPVLSQAYWCAIIAFTLNTSAYLAEIIRGAIQNIPVG 127


>gi|293375083|ref|ZP_06621373.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292646277|gb|EFF64297.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 220

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 108/226 (47%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+   A    F  + G VL++      +    K  + +   YI   +I 
Sbjct: 12  YWYVFLEGLGGTLSLAAITVFFGMIFGAVLAII-----KLSKSKIVQFISTAYIE--IIR 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   Y      P    F          ++  + IAL   ++A++AEI+R+G+ 
Sbjct: 65  GTPLLLQL---YFFWLFLPKYLPFEI-------SDWTCIVIALVINSSAYVAEIIRAGIQ 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQMEAA +LG++       ++ PQA+++I+P L ++++ ++K +SLA      DL+
Sbjct: 115 AVDKGQMEAAKSLGMSDVHMMTRIIFPQAVKNILPALGNEFIMMVKETSLASVFFINDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    I + T + I  ++I   IY  ++  ++  +  +  ++++ +
Sbjct: 175 TSYQMIKSATFKPIAPLMITAVIYFIVTFSLSKVVKAMEGRLSVSD 220



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 35/82 (42%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G   T  LA   +    I G ++   +LS +K+V +I   Y+E+ R  P L
Sbjct: 10  DQYWYVFLEGLGGTLSLAAITVFFGMIFGAVLAIIKLSKSKIVQFISTAYIEIIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIV 164
           + ++F +  +   LP       
Sbjct: 70  LQLYFFWLFLPKYLPFEISDWT 91


>gi|320177110|gb|EFW52126.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella dysenteriae CDC 74-1112]
          Length = 158

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/142 (33%), Positives = 75/142 (52%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIP
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIP 135

Query: 141 PLVVIFFLYKSVLSVLPIPDHS 162
           PL+ IFF Y +VL  LP P   
Sbjct: 136 PLLQIFFWYFAVLRNLPGPRAR 157


>gi|282899900|ref|ZP_06307861.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195170|gb|EFA70106.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii
           CS-505]
          Length = 313

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 132/226 (58%), Gaps = 20/226 (8%)

Query: 188 KIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYISTFLIFGLPT------- 234
              +F+ V+GI   +      +  R     + +  +  PLL    F  FG+         
Sbjct: 92  LGILFATVVGITAGIGRLSDNWLVRNISLVYVEIFRNTPLLLQLLFWYFGVFLSLPRPEN 151

Query: 235 -LVLIALKY--QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            + L  L Y  Q   D P L       G  ++PEF +L + L+ YT AFIAEIVR+G+ +
Sbjct: 152 KISLFGLGYLSQNGIDLPTLTY----QGVNLTPEFSTLLLGLTFYTGAFIAEIVRAGIKS 207

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ EA ++LGL      RL++ PQA++ I+PPLTSQYLNL+KNSSLA+A+G+ D+  
Sbjct: 208 VSQGQREAGLSLGLRPGLLMRLIIFPQALKLIVPPLTSQYLNLMKNSSLAIAIGYPDIYF 267

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V  T  NQTG+A+E++++ M  YL+LS+ I++ MN +N  + +KE+
Sbjct: 268 VASTTFNQTGKAVEVMILLMITYLTLSLTISIVMNLVNRTVQIKER 313



 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/183 (34%), Positives = 97/183 (53%)

Query: 14  SRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID 73
           S+     + R   I++Q++  ++         NN  +N+ +  +SLG  FL  +A F+I 
Sbjct: 4   SQPPIWRNYRFWQIAIQVVAIIIALGTVNILWNNANHNLRQLGISLGWDFLERQASFDIG 63

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + +V Y +  SY  A+ VG VN+  +A  G++ AT++G   G GRLS N LV  I  VYV
Sbjct: 64  ESLVKYDATDSYGRALGVGLVNSLRVATLGILFATVVGITAGIGRLSDNWLVRNISLVYV 123

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E+FRN P L+ + F Y  V   LP P++ I L    +L+  G+  PTLT         FS
Sbjct: 124 EIFRNTPLLLQLLFWYFGVFLSLPRPENKISLFGLGYLSQNGIDLPTLTYQGVNLTPEFS 183

Query: 194 FVL 196
            +L
Sbjct: 184 TLL 186


>gi|70733845|ref|YP_257485.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348144|gb|AAY95750.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 229

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 13/226 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L           ++   + +LG++L++    ++R       +ALP  YI  F   G 
Sbjct: 7   YKWLPKFIQGATLTLELVGIAVILGLLLAIPLG-IARSSKLWYVRALPYAYIFFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF+ +  S + P     F      ++ +TAA+IAEI+R  
Sbjct: 64  PLLVQLFLVYY------GLAQFDAVRDSFMWPYLRDPFWCATATMTLHTAAYIAEILRGA 117

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK SSLA  V   +
Sbjct: 118 IQAIPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLE 177

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  +  TII +    +++       YL +S ++     +L   + +
Sbjct: 178 LTGMARTIIARNYLTVDMFFTAGVFYLLMSFILVQAFRQLERWLRV 223



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    + G   T  L    +I   ++   +G  R S    V  +   Y+  FR  P LV 
Sbjct: 9   WLPKFIQGATLTLELVGIAVILGLLLAIPLGIARSSKLWYVRALPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     + D  +   
Sbjct: 69  LFLVYYGLAQFDAVRDSFMWPY 90


>gi|319744241|gb|EFV96606.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 267

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 106/259 (40%), Gaps = 9/259 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++   + + + L               +      L    +T+       +F  +L ++ +
Sbjct: 5   ILTGGWPWYNNLVSQVPAGKLFSWKAVLDAIPSILERLPITLLLTVAGALFGLILALIFA 64

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
           +      +  +       P+  +    + G P LV + L Y     F K +  Q+ F   
Sbjct: 65  VVKINRVKILY-------PIQALFVSFLRGTPILVQLMLSYYGIPLFLKFLNQQYGFDWN 117

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P  +    A +   AA+ +E +R+ +++V +G++EAA +LG+T  +  R V++P A
Sbjct: 118 INAIPASVFAITAFAFNEAAYTSETIRAAILSVDQGEIEAARSLGMTSAQVYRRVIIPNA 177

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
                P L +  + L K +SLA   G  ++ +    +     +  E  +    +Y ++S 
Sbjct: 178 AVVATPTLINTLIGLTKGTSLAFNAGIVEMFAQAQIMGGSDYRYFERYISVALVYWAVSF 237

Query: 380 MIALFMNRLNAKIALKEKK 398
           +I    N +  K+A+K  +
Sbjct: 238 LIEQLGNAIERKMAIKAPR 256


>gi|300921107|ref|ZP_07137491.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300411958|gb|EFJ95268.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 238

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVDLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|228989527|ref|ZP_04149512.1| Amino acid ABC transproter, permease [Bacillus pseudomycoides DSM
           12442]
 gi|228995720|ref|ZP_04155383.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock3-17]
 gi|229003347|ref|ZP_04161177.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock1-4]
 gi|228757965|gb|EEM07180.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock1-4]
 gi|228764097|gb|EEM12981.1| Amino acid ABC transproter, permease [Bacillus mycoides Rock3-17]
 gi|228770252|gb|EEM18831.1| Amino acid ABC transproter, permease [Bacillus pseudomycoides DSM
           12442]
          Length = 230

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V I + Y              I    V   F +
Sbjct: 41  RISNNKILNSIAHIYI--AVIRGTPLIVQIMILY------------FGITSIIVLSPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+++  A R ++LPQA R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMSYPLAMRRIILPQAFRLSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     + +E  ++    YL L ++    +N L
Sbjct: 147 NQFVIGLKDSSLVAYVGMSELWGSGLSIAAGNFKQLETYIVVSAYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             K+  K+
Sbjct: 207 EKKLQRKQ 214


>gi|260662492|ref|ZP_05863387.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|260553183|gb|EEX26126.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 245

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 99/223 (44%), Gaps = 16/223 (7%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSR---HFHEKTGKALPLLYISTFLIFGL 232
                +     I + SFV+G+V+++     R+S+    F         +     +L    
Sbjct: 28  IFWAGIKYTIPIAIISFVIGLVIAVITALIRISKPQGKFKAVWAVVRAVFSFYVWLFRST 87

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + +           F           + +  I  S  T A+ +E +R  L+++
Sbjct: 88  PLLVQLFIVF-----------FGLPNVGIQFNAWTAGIITFSLNTGAYASETIRGALLSI 136

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q +AA ++G+T+R+    ++ PQA+R  +PPL++ ++ L+K++SLA ++   ++  V
Sbjct: 137 PDSQWDAAYSIGMTYRQVLFRIVFPQALRVALPPLSNSFIGLVKDTSLASSITIVEMFMV 196

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              I +   Q + +  I   IY     ++++  + L    +  
Sbjct: 197 SQQIASNNYQPLLMYSIVAAIYALFCTVLSILQHYLEKWTSRY 239



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 8/82 (9%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN--------KLVAWICRVYVEVFRNIP 140
              G   T  +A    +   +I  +    R+S           +V  +   YV +FR+ P
Sbjct: 29  FWAGIKYTIPIAIISFVIGLVIAVITALIRISKPQGKFKAVWAVVRAVFSFYVWLFRSTP 88

Query: 141 PLVVIFFLYKSVLSVLPIPDHS 162
            LV +F ++  + +V    +  
Sbjct: 89  LLVQLFIVFFGLPNVGIQFNAW 110


>gi|85058513|ref|YP_454215.1| amino-acid ABC transporter permease component [Sodalis glossinidius
           str. 'morsitans']
 gi|84779033|dbj|BAE73810.1| amino-acid ABC transporter permease component [Sodalis glossinidius
           str. 'morsitans']
          Length = 219

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 14/233 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           + P+   + +      T  +     + + SFV G+VL  F   L R +  +  K +   Y
Sbjct: 1   MPPWLQLMYDSFWRLFTAGLMFTLPLALLSFVGGLVLG-FLVALVRLYGPQPLKGIADFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  +    A+ +E
Sbjct: 60  V--WVIRGTPLLVQLFLIFY-----------GLPSAGVTLDAFPAALIGFTLSVGAYGSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R  +++VP+ Q EAA A+G+   +A R V+LPQ++   IPPL + +++L+K++SLA  
Sbjct: 107 IIRGAIVSVPKAQWEAAWAIGMNSTQAMRRVILPQSVFVSIPPLANSFISLIKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   ++      I++ T + + + +    IYL  S +++   NRL       E
Sbjct: 167 ITVPEMFLAAQRIVSVTYEPLILYIEAAAIYLLFSTVLSKVQNRLEVYFRRYE 219



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+      G + T  LA    +   ++G LV   RL   + +  I   YV V R  P L
Sbjct: 10  DSFWRLFTAGLMFTLPLALLSFVGGLVLGFLVALVRLYGPQPLKGIADFYVWVIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S     D       G  L+
Sbjct: 70  VQLFLIFYGLPSAGVTLDAFPAALIGFTLS 99


>gi|75765095|ref|ZP_00744384.1| Glutamine transport system permease protein glnM [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74487419|gb|EAO51346.1| Glutamine transport system permease protein glnM [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 190

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 115/204 (56%), Gaps = 18/204 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            + SF+LG++L++      R           L ++ +  +  +  + L+ + +  +F  P
Sbjct: 1   MIGSFILGVILAVMRIAPIRI----------LNWVGSAFVEFVRNIPLVLIAFIFYFALP 50

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           V+              F++  + L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +
Sbjct: 51  VI--------GITLNGFVAGTVTLTVYTAAFIAEVIRAGILSVEKGQMEAARSSGLTYTQ 102

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A   V+LPQAM+ +IPPL +Q+LNL+KNSS+   +  ADL+  G  I  +T    ++ + 
Sbjct: 103 AMYHVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIF 162

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL L+I +++ +  L  ++A
Sbjct: 163 VGMFYLILTIPLSMLVRYLEKRLA 186



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 30/50 (60%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           MI + I+G ++   R++  +++ W+   +VE  RNIP +++ F  Y ++ 
Sbjct: 1   MIGSFILGVILAVMRIAPIRILNWVGSAFVEFVRNIPLVLIAFIFYFALP 50


>gi|56807954|ref|ZP_00365770.1| COG0765: ABC-type amino acid transport system, permease component
           [Streptococcus pyogenes M49 591]
          Length = 227

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 118/230 (51%), Gaps = 10/230 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L F             +T+  +  +  F  ++G++++L      +  H K    +  LY+
Sbjct: 2   LSFLPKYWAYFNYGVLVTIMISVSVVFFGTLIGVLVTLI-----KRSHVKPLTWVVNLYV 56

Query: 225 STFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             F   G P +V I + +  +HF+      F  +         +   I +S  + A+I+E
Sbjct: 57  WIF--RGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLD--FSRLLPGIIIISLNSGAYISE 112

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++ ++K+S+L   
Sbjct: 113 IVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDSALLQT 172

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +G  +L +   +++  T   I  +L+  F YL ++ ++A  +  L   +A
Sbjct: 173 IGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMA 222



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++ S +   T+IG LV   + S  K + W+  +YV +FR  P +V 
Sbjct: 8   YWAYFNYGVLVTIMISVSVVFFGTLIGVLVTLIKRSHVKPLTWVVNLYVWIFRGTPMVVQ 67

Query: 145 IFFLYKSV 152
           I   +  +
Sbjct: 68  IMIAFAWM 75


>gi|291519629|emb|CBK74850.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Butyrivibrio fibrisolvens
           16/4]
          Length = 223

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 105/226 (46%), Gaps = 10/226 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+        F+ ++G++  +              K      IS   + 
Sbjct: 8   YGPMLLIAMGRTLLLALLGLFFACIIGMIFGIMG----------VLKNRACNIISQIFVD 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  + +I L + ++F  P L      G +       +    L+    A++AEI+R+G+ 
Sbjct: 58  VIRGVPMIVLAFFIYFGIPYLFNTIIGGFAINLTALQAGTACLALNCGAYMAEIIRAGIQ 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQMEAA +LGLT+ +A R V+LPQA+R++IP   +Q++  LK++S+   +GF +LV
Sbjct: 118 SVDIGQMEAARSLGLTYSQAMRKVVLPQAIRTMIPTFINQFIITLKDTSILSVIGFPELV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    +   T  + +   I   +YL +  +++     +  ++++  
Sbjct: 178 NTAKNVQANTFMSFQTWAIVGIMYLIVITILSRSAKVVERRLSVGR 223


>gi|239827640|ref|YP_002950264.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. WCH70]
 gi|239807933|gb|ACS24998.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. WCH70]
          Length = 219

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 107/212 (50%), Gaps = 13/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              KI VF+ +LG VL +    L +    K        Y S F   G P ++ + L Y  
Sbjct: 21  VTLKIVVFAVLLGFVLGVIL-ALMKIGRMKVLTWFADAYTSVF--RGTPLVLQLVLIY-- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L              F +  IA    +AA+++EI+R+G++AV +GQ EAA+ALG
Sbjct: 76  -FGIPQLTGVEI-------DAFPAAVIAFGLNSAAYVSEIIRAGILAVDKGQREAALALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + ++   R ++LPQA+++I+P L ++++ L K S++   +G  D++     +  Q  + I
Sbjct: 128 VPYKLMMRDIILPQALKNILPALMNEFITLTKESAVVTVIGAMDVMRRAYIVGGQVYRYI 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E +LI   IY  L +++ L    L  ++   +
Sbjct: 188 EPLLIAGLIYYVLVMLLTLLGKALEGRLRKSD 219



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    ++   ++G ++   ++   K++ W    Y  VFR  P ++ +  +
Sbjct: 15  ILAGIAVTLKIVVFAVLLGFVLGVILALMKIGRMKVLTWFADAYTSVFRGTPLVLQLVLI 74

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 75  YFGIPQL 81


>gi|237669674|ref|ZP_04529651.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237654748|gb|EEP52311.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 221

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 17/205 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + +LGIV  +F+   ++           L  I  ++I G P +V   + Y       V  
Sbjct: 32  AVILGIVFGIFSISKNKILKT-------LYIIYLYIIRGTPLMVQALIIYFGIAPLIVER 84

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                     S       IAL+    A+++EI R+G+ AV  GQMEA+ +LGL + K  +
Sbjct: 85  ----------SNPMYCAIIALALNAGAYMSEIFRAGIQAVDVGQMEASRSLGLGYLKTMQ 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA++ +IP + +Q++  +K++S+   +   +L S G  I+ +  + +E   I   
Sbjct: 135 KVILPQAIKVMIPSIINQFIVTIKDTSILTVITIRELTSSGQIIVARNFKPLETYAIVGI 194

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +Y  L   +++    +   +    K
Sbjct: 195 MYFILITTLSILSKYIERSLHHGHK 219


>gi|116695745|ref|YP_841321.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113530244|emb|CAJ96591.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 216

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 14/226 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L    L       + + +FV G +   F   L+R       +     YI   ++ 
Sbjct: 5   FSWNHLEILLLAARWTLWVTLLAFVGGTLAG-FLVALARTSRSPMLRLASTAYIQ--VVQ 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+++ L Y                        ++  +A+S Y +A++ EI R  + 
Sbjct: 62  GTPVLIVLFLSYY-----------GLSVLGLKLSPMVAAMLAMSIYASAYLGEIWRGCIE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EA+ AL LT  +  R V+LPQA+R  +PP     + L+KN+S+   +G  +L 
Sbjct: 111 AVPQGQWEASEALALTRWQQLRYVVLPQAVRLALPPTVGFSVQLVKNTSITSIIGVIELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             G  I N T Q   + ++   IY +L   ++    R+  ++ +  
Sbjct: 171 RAGQLINNATFQPFAVFVVVALIYFALCFPLSAAARRMERRLHVNR 216



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 37/106 (34%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++   +L+    T W+     +  T+ G LV   R S + ++      Y++V +  P 
Sbjct: 6   SWNHLEILLLAARWTLWVTLLAFVGGTLAGFLVALARTSRSPMLRLASTAYIQVVQGTPV 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L+V+F  Y  +  +       +     M +               A
Sbjct: 66  LIVLFLSYYGLSVLGLKLSPMVAAMLAMSIYASAYLGEIWRGCIEA 111


>gi|302540996|ref|ZP_07293338.1| amino acid ABC transporter, permease PEB1 [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458614|gb|EFL21707.1| amino acid ABC transporter, permease PEB1 [Streptomyces
           himastatinicus ATCC 53653]
          Length = 216

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 19/229 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFS--FVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + +  +NR L    L           +   +LG+V++       R             
Sbjct: 1   MDWSVLWSNRDLYASGLWSTVELSAAAIAACTLLGLVIAAI-----RTSRIPVLAQFARC 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F   G P LV +   Y                G      F +  +AL+ +  A++A
Sbjct: 56  YLEIF--RGTPLLVQMLFIYFGAAYL----------GIGNISVFGAALLALTLFQGAYVA 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG+ AVPRGQ EAA  LGL+  +    V+LPQ    ++PPL  QYL+L+K++S+AV
Sbjct: 104 EIFRSGIEAVPRGQWEAARVLGLSRVQTFGTVILPQTRAIVLPPLVGQYLSLVKDTSIAV 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +G+A+L+  G  I+++ G      L    +Y  +   +++ + R+  K
Sbjct: 164 VIGYAELLREGQAIVDRDGHPGMAYLAIAVLYFVICSPLSVVVRRMERK 212



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 37/75 (49%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++   S       G  +T  L+ + +   T++G ++ A R S   ++A   R Y+E+F
Sbjct: 1   MDWSVLWSNRDLYASGLWSTVELSAAAIAACTLLGLVIAAIRTSRIPVLAQFARCYLEIF 60

Query: 137 RNIPPLVVIFFLYKS 151
           R  P LV + F+Y  
Sbjct: 61  RGTPLLVQMLFIYFG 75


>gi|323339297|ref|ZP_08079587.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus ruminis ATCC 25644]
 gi|323093281|gb|EFZ35863.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus ruminis ATCC 25644]
          Length = 228

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 98/192 (51%), Gaps = 4/192 (2%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R    K  + +  +YIS  ++ G P+++ + L Y        +   + +G S      
Sbjct: 39  LMRISDNKILETISRVYIS--IVRGTPSMIQVMLIYYSLSKVLSIPPIHILGASL--DRV 94

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +   IAL   + A+ AEI RSG+I++P+GQ EA ++LG+T       ++LPQA+R+ +P 
Sbjct: 95  LPGSIALGLNSGAYTAEIFRSGIISIPKGQTEAGLSLGMTRHMVMFEIVLPQAVRNALPA 154

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + +++++L+K SS+   +G  ++ +    +       +  +++   +Y  L+  ++  + 
Sbjct: 155 MGNEFISLIKESSVLFYIGVQEVTAQALGVGGTLYDFVPPLIVAAAVYFVLTFTLSWIIG 214

Query: 387 RLNAKIALKEKK 398
               K++ K  +
Sbjct: 215 YFEKKMSRKYTR 226


>gi|226362676|ref|YP_002780454.1| ABC transporter substrate-binding/permease protein [Rhodococcus
           opacus B4]
 gi|226241161|dbj|BAH51509.1| putative ABC transporter substrate-binding/permease protein
           [Rhodococcus opacus B4]
          Length = 603

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 16/239 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                                +     + + S ++G VL +    ++     +  +    
Sbjct: 358 KDTFFDWDLYARAFPDLLKTGLPNTLILALASGIVGTVLGMLL-AMAGISRTRWLRWPAR 416

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y   F   GLP +V+I +          LG    + G T +  +     ALS   +A+I
Sbjct: 417 VYTDVF--RGLPAVVIILIV--------GLGVGPVVKGLTGNNPYWLGAAALSLLASAYI 466

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI RSG+ +V  GQ+EA+ ALG ++RK+  LV++PQ +R ++P L +Q+++L+K+SSL 
Sbjct: 467 GEIFRSGIQSVEPGQLEASRALGFSYRKSMTLVVVPQGVRRVLPALMNQFISLIKDSSLI 526

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G      +L +VG  +  QTG  +  ++     YL+L+I +   +N ++ ++    
Sbjct: 527 YFLGLLVTQRELFAVGRDLNAQTGN-LSPLVAAGLFYLALTIPLTHLVNYIDNRLRTGR 584



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 69/205 (33%), Gaps = 13/205 (6%)

Query: 83  SSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
             YA A       G  NT  LA +  I  T++G L+    +S  + + W  RVY +VFR 
Sbjct: 365 DLYARAFPDLLKTGLPNTLILALASGIVGTVLGMLLAMAGISRTRWLRWPARVYTDVFRG 424

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P +V+I  +   V  V+     +     G    +   S     +  +    V    L  
Sbjct: 425 LPAVVIILIVGLGVGPVVKGLTGNNPYWLGAAALSLLASAYIGEIFRSGIQSVEPGQLEA 484

Query: 199 VLSL-FATRLSRHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
             +L F+ R S           + LP L      +    +L+     Y L         F
Sbjct: 485 SRALGFSYRKSMTLVVVPQGVRRVLPALMNQFISLIKDSSLI-----YFLGLLVTQRELF 539

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAA 279
                       +S  +A   +  A
Sbjct: 540 AVGRDLNAQTGNLSPLVAAGLFYLA 564


>gi|227543804|ref|ZP_03973853.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus reuteri CF48-3A]
 gi|300908873|ref|ZP_07126336.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|68160832|gb|AAY86862.1| lr1198 [Lactobacillus reuteri]
 gi|227186181|gb|EEI66252.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus reuteri CF48-3A]
 gi|300894280|gb|EFK87638.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 487

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T++      +F+ + G++L +     ++  +           +S+ LI+ 
Sbjct: 283 YPALLRGLWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANA----------VSSTLIYI 332

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              + +I L + ++   P     N IG     P F++  + L+    A+I  IV+ G  +
Sbjct: 333 FRGIPMIVLAFFIYMGIP-----NVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFES 385

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  +L  
Sbjct: 386 VNIGQWEAARSLGLPYSKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQ 445

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II+Q  +  ++ LI   +Y+ +  ++    N +  ++A
Sbjct: 446 TGTVIISQNMEGFKMWLIIGTMYIIIITLLTWLSNYVQKRMA 487



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L   G+I A I G ++G   ++ NK    +    + +FR IP +V+ FF
Sbjct: 285 ALLRGLWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFF 344

Query: 148 LYKSVLSVLPI 158
           +Y  + +V+  
Sbjct: 345 IYMGIPNVIGH 355


>gi|34498437|ref|NP_902652.1| amino-acid transport system permease ABC transporter protein
           [Chromobacterium violaceum ATCC 12472]
 gi|34104291|gb|AAQ60650.1| probable amino-acid transport system permease ABC transporter
           protein [Chromobacterium violaceum ATCC 12472]
          Length = 226

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 11/222 (4%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +   A         G+V ++  T LS       G     L ++   +FG   LVL+
Sbjct: 1   MPPWLQLMADSLPSLLYAGLVFTVPLTLLS-----FAGGLALGLLVALIRLFGPRPLVLL 55

Query: 239 ALKY-QLHFDKPVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
              Y  L    P+L Q   I         V   F +  +       A+ +E++R+ + +V
Sbjct: 56  VRGYSWLVRGTPLLVQLFVIFYGLPRVGIVFDPFPAALLGFVLSVGAYTSEVIRAAISSV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PR Q EAA +LG++  +A R  +LPQA R  +PPL + +++L+K++SLA  +   ++   
Sbjct: 116 PRAQWEAAYSLGMSWSQAMRRTILPQAGRVAVPPLANSFISLVKDTSLAAVLTVPEMFQA 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              I   T + + + L    IYL LS ++     RL  +   
Sbjct: 176 AQRIAATTYEPLLLYLETALIYLLLSTVLTWLQERLEKRFDR 217


>gi|19746459|ref|NP_607595.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS8232]
 gi|19748662|gb|AAL98094.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS8232]
          Length = 228

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F             +T+  +  +  F  ++G++++L      +  H K    +  L
Sbjct: 1   MDLSFLPKYWAYFNYGVLVTIMISISVVFFGTLIGVLVTLI-----KRSHVKPLTWVVNL 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+      F  +         +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   +++  T   I  +L+  F YL ++ ++A  +  L   +A
Sbjct: 172 QTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMITTVMAQLLAVLERHMA 223



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++ S +   T+IG LV   + S  K + W+  +YV +FR  P +V 
Sbjct: 9   YWAYFNYGVLVTIMISISVVFFGTLIGVLVTLIKRSHVKPLTWVVNLYVWIFRGTPMVVQ 68

Query: 145 IFFLYKSV 152
           I   +  +
Sbjct: 69  IMIAFAWM 76


>gi|196040103|ref|ZP_03107405.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus NVH0597-99]
 gi|300118987|ref|ZP_07056698.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus SJ1]
 gi|196028958|gb|EDX67563.1| putative amino acid ABC transporter, permease protein [Bacillus
           cereus NVH0597-99]
 gi|298723603|gb|EFI64334.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus SJ1]
          Length = 230

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +    M      L    +T+       V   ++G++ + F     R  + K   ++  +Y
Sbjct: 1   MFEIFMSTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF-----RISNNKVLNSIAHVY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   +I G P +V IA+ Y              I    V   F +  IAL+ +  A+I E
Sbjct: 56  I--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWAGAIALAIHNGAYITE 101

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL +Q++  LK+SSL   
Sbjct: 102 IFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLGNQFIIGLKDSSLVAY 161

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           VG ++L   G +I     Q ++  +I    YL L ++    +N L  ++  KE
Sbjct: 162 VGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 214



 Score = 43.4 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|15675409|ref|NP_269583.1| putative amino acid ABC transporter permease [Streptococcus
           pyogenes M1 GAS]
 gi|71911051|ref|YP_282601.1| arginine transporter permease [Streptococcus pyogenes MGAS5005]
 gi|94988863|ref|YP_596964.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94990763|ref|YP_598863.1| arginine ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|94992753|ref|YP_600852.1| arginine ABC transporter permease [Streptococcus pyogenes MGAS2096]
 gi|94994741|ref|YP_602839.1| Arginine transport system permease protein artQ [Streptococcus
           pyogenes MGAS10750]
 gi|139473469|ref|YP_001128185.1| putative amino acid ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
 gi|209559673|ref|YP_002286145.1| Putative amino acid ABC transporter [Streptococcus pyogenes NZ131]
 gi|306827045|ref|ZP_07460343.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pyogenes ATCC 10782]
 gi|13622596|gb|AAK34304.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes M1 GAS]
 gi|71853833|gb|AAZ51856.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS5005]
 gi|94542371|gb|ABF32420.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94544271|gb|ABF34319.1| Arginine transport system permease protein artQ [Streptococcus
           pyogenes MGAS10270]
 gi|94546261|gb|ABF36308.1| Arginine transport system permease protein artQ [Streptococcus
           pyogenes MGAS2096]
 gi|94548249|gb|ABF38295.1| Arginine transport system permease protein artQ [Streptococcus
           pyogenes MGAS10750]
 gi|134271716|emb|CAM29949.1| putative amino acid ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
 gi|209540874|gb|ACI61450.1| Putative amino acid ABC transporter [Streptococcus pyogenes NZ131]
 gi|304430791|gb|EFM33802.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus pyogenes ATCC 10782]
          Length = 228

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F             +T+  +  +  F  ++G++++L      +  H K    +  L
Sbjct: 1   MDLSFLPKYWAYFNYGVLVTIMISVSVVFFGTLIGVLVTLI-----KRSHVKPLTWVVNL 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+      F  +         +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   +++  T   I  +L+  F YL ++ ++A  +  L   +A
Sbjct: 172 QTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMA 223



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++ S +   T+IG LV   + S  K + W+  +YV +FR  P +V 
Sbjct: 9   YWAYFNYGVLVTIMISVSVVFFGTLIGVLVTLIKRSHVKPLTWVVNLYVWIFRGTPMVVQ 68

Query: 145 IFFLYKSV 152
           I   +  +
Sbjct: 69  IMIAFAWM 76


>gi|165871415|ref|ZP_02216063.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167634127|ref|ZP_02392449.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|167640079|ref|ZP_02398346.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|170688352|ref|ZP_02879561.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|170708925|ref|ZP_02899358.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|177653629|ref|ZP_02935768.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190567465|ref|ZP_03020378.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227813034|ref|YP_002813043.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|229603364|ref|YP_002864981.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
 gi|254686755|ref|ZP_05150613.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724831|ref|ZP_05186614.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           A1055]
 gi|254739022|ref|ZP_05196724.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Western North America USA6153]
 gi|254740746|ref|ZP_05198436.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Kruger B]
 gi|254756134|ref|ZP_05208163.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Vollum]
 gi|254761952|ref|ZP_05213801.1| amino acid ABC transproter, permease [Bacillus anthracis str.
           Australia 94]
 gi|164712899|gb|EDR18428.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0488]
 gi|167511890|gb|EDR87269.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0193]
 gi|167530441|gb|EDR93156.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0442]
 gi|170126158|gb|EDS95052.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0389]
 gi|170667684|gb|EDT18438.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0465]
 gi|172081209|gb|EDT66284.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0174]
 gi|190561252|gb|EDV15224.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227002430|gb|ACP12173.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. CDC 684]
 gi|229267772|gb|ACQ49409.1| putative amino acid ABC transporter, permease protein [Bacillus
           anthracis str. A0248]
          Length = 230

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +    M      L    +T+       V   ++G++ + F     R  + K   ++  +Y
Sbjct: 1   MFEIFMSTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF-----RISNNKVLNSIAHVY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   +I G P +V IA+ Y              I    V   F +  IAL+ +  A+I E
Sbjct: 56  I--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWAGAIALAIHNGAYITE 101

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  + +V RGQMEAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   
Sbjct: 102 IFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLGNQFIIGLKDSSLVAY 161

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           VG A+L   G +I     Q ++  +I    YL L ++    +N L  ++  KE
Sbjct: 162 VGMAELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLLEKRLQRKE 214



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|303230413|ref|ZP_07317174.1| ABC transporter, permease protein [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514952|gb|EFL56933.1| ABC transporter, permease protein [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 218

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           ++V S   GI+L+L      R         +   ++  +L+ G P ++ I   Y   +  
Sbjct: 26  VWVLSIPGGIILALL-----RLSKLPVVDKIVEAFV--YLMRGTPLMLQILFMY---YAL 75

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P++       G+    +  +  +      AA++ EI R G+ ++PRGQ E A  LG T+ 
Sbjct: 76  PIMT-----DGAIQMDDATAAVVTFVLNYAAYLCEIFRGGIQSIPRGQYEGAKVLGFTYG 130

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++LPQ  + ++PPL ++ +NLLK++SL   +   D++ +  +I+ +    I   L
Sbjct: 131 QTMRTIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD-ISAFL 189

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    YL  + ++    N L  + ++ +
Sbjct: 190 VAAIFYLIFTFILTNIFNYLEKRFSVYD 217



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L     + +   G ++   RLS   +V  I   +V + R  P ++ I F+
Sbjct: 12  IADGLKVTIALFCVVWVLSIPGGIILALLRLSKLPVVDKIVEAFVYLMRGTPLMLQILFM 71

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 72  YYALP 76


>gi|258621395|ref|ZP_05716429.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258626822|ref|ZP_05721629.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|262165969|ref|ZP_06033706.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262171176|ref|ZP_06038854.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|258580869|gb|EEW05811.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258586783|gb|EEW11498.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|261892252|gb|EEY38238.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|262025685|gb|EEY44353.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 225

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   S V+G++ ++    ++R+  +K        YI    + G P L
Sbjct: 10  LPVYLSGLWTTVWLVSLSLVIGLMCAIPL-AIARNSKQKLLSYPAWGYIYF--LRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + Q+  + G+     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQWFPVKGTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSRLQTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I     +   + 
Sbjct: 181 VNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEKRF 217



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 35/103 (33%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++   +    +   R S  KL+++    Y+   R  P LV ++ 
Sbjct: 12  VYLSGLWTTVWLVSLSLVIGLMCAIPLAIARNSKQKLLSYPAWGYIYFLRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +Y  +    P+        +   L    L+    T +      
Sbjct: 72  IYYGMDQWFPVKGTLWEHAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|229095070|ref|ZP_04226066.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-29]
 gi|229101172|ref|ZP_04231938.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-28]
 gi|229114024|ref|ZP_04243450.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-3]
 gi|228669483|gb|EEL24899.1| Amino acid ABC transproter, permease [Bacillus cereus Rock1-3]
 gi|228682300|gb|EEL36411.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-28]
 gi|228688400|gb|EEL42282.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-29]
          Length = 230

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +    +      L    +T+       V   ++G++ + F     R  + K   ++  +Y
Sbjct: 1   MFEIFISTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF-----RISNNKVLNSIAHVY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   +I G P +V IA+ Y              I    V   F +  IAL+ +  A+I E
Sbjct: 56  I--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWAGAIALAIHNGAYITE 101

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   
Sbjct: 102 IFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAY 161

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           VG ++L   G +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 162 VGLSELWGSGLSIAASNFQQLDTYVIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISNNKVLNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|91780446|ref|YP_555653.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693106|gb|ABE36303.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 602

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++ I  +   + SVL  P     +    F     LS    T+   A   +F F   I L+
Sbjct: 44  VLAIVLIGVVLNSVLGNPRWGWGVFAEWFFAGPVLSGLGRTLVLTALSALFGFAFAIPLA 103

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     S          + L      ++  L    L  L   +    P          +T
Sbjct: 104 LARVSRSPLLTGCAWAFIWLFRSIPPIVLLLLLNNLGYLYETIWIGVPFTHITLLDESTT 163

Query: 262 -VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ EAA ALGL   +  R ++LPQAM
Sbjct: 164 NLISPFFAAVLGLTLNAAAFSAEAIRGGILSVDQGQREAAAALGLPGGRQVRRIVLPQAM 223

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+P   +  + L K +S+   +   DL      I ++  + I ++++    YL +   
Sbjct: 224 RAILPTAFNDVIGLAKGTSVVYILAMPDLFYTVQIIYHRNLEVIPLLMVATVWYLVILTA 283

Query: 381 IALFMNRLNAKIALKEKK 398
           ++     +    A    +
Sbjct: 284 LSAIQVHIERYYARGATR 301



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 1/106 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L     +        +   R+S + L+      ++ +FR+IPP+V++  L 
Sbjct: 78  LSGLGRTLVLTALSALFGFAFAIPLALARVSRSPLLTGCAWAFIWLFRSIPPIVLLLLLN 137

Query: 150 KSVLSVL-PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
                               +  +   L  P         +   +F
Sbjct: 138 NLGYLYETIWIGVPFTHITLLDESTTNLISPFFAAVLGLTLNAAAF 183


>gi|255067574|ref|ZP_05319429.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria sicca ATCC 29256]
 gi|255048195|gb|EET43659.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria sicca ATCC 29256]
          Length = 248

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DKPVLGQFNFIGGSTVSPEF 266
              + + LLY++ F   G P  V I +   + F       D  ++     +         
Sbjct: 60  WVLRKVSLLYVTLF--RGTPLFVQIVIWSYVWFPFFVHPTDGLLINGDEAVEIRRSYGAL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ RGQMEAA +LGLT+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALIANSGAYICEIFRAGIQSIDRGQMEAARSLGLTYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVAELAYVQSTISGRYSVYEEPLYTVALIYLLMTTFLGWVFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLENRYNPQHR 248


>gi|16119238|ref|NP_395944.1| deoxyfructosyl-amino acid ABC-type membrane transporter
           [Agrobacterium tumefaciens str. C58]
 gi|5257497|gb|AAD41366.1|AF151698_3 GlnP/GlnQ-like protein [Agrobacterium tumefaciens str. C58]
 gi|15161737|gb|AAK90385.1| Deoxyfructosyl-amino acid ABC-type Membrane Transporter
           [Agrobacterium tumefaciens str. C58]
          Length = 502

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 22/219 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V    +G++L++     S        +    LY   F   GLP +V I L  Q 
Sbjct: 35  LAATSTVLGVAIGMMLAIMGISRS-----PWLRIPARLYTDIF--RGLPAIVTILLIGQ- 86

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  +    +ALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 87  --------GFARIGRELFGPSPYPLGILALSLIAGAYIGEIFRSGIQSVDRGQMEACRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            +++ +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 139 SMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           TG  +  +L+    YL +++ +   +N ++ ++ + +++
Sbjct: 199 TGN-LSPLLLAGVFYLIVTVPLTHVVNAIDNRLRIGKQR 236



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 35/82 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I VG  NT  LA +  +    IG ++    +S +  +    R+Y ++FR +P +V I  +
Sbjct: 25  ITVGLKNTLILAATSTVLGVAIGMMLAIMGISRSPWLRIPARLYTDIFRGLPAIVTILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            +    +          P G+ 
Sbjct: 85  GQGFARIGRELFGPSPYPLGIL 106


>gi|52078834|ref|YP_077625.1| amino acid ABC transporter permease [Bacillus licheniformis ATCC
           14580]
 gi|52784205|ref|YP_090034.1| YckA [Bacillus licheniformis ATCC 14580]
 gi|319648872|ref|ZP_08003081.1| YckA protein [Bacillus sp. BT1B_CT2]
 gi|52002045|gb|AAU21987.1| Amino acid ABC transporter, permease protein YckA [Bacillus
           licheniformis ATCC 14580]
 gi|52346707|gb|AAU39341.1| YckA [Bacillus licheniformis ATCC 14580]
 gi|317388866|gb|EFV69684.1| YckA protein [Bacillus sp. BT1B_CT2]
          Length = 227

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 14/237 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   L  +   +    +     I   S   G++L  F   L R       +    
Sbjct: 5   QWEYIFNAELAAKSFPYVMQGIWNTLFISFASMFAGLILGFFI-ALGRMSGLALLRWPAR 63

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS   + G+P LV++ + Y           F F           +  I  S  +AA+I
Sbjct: 64  IYISF--MRGVPILVILFILY-----------FGFPYIGIQFTALAAALIGFSINSAAYI 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+RS L +V RGQ +AA ++G ++ +  R V++PQ++R  +PPL +  L+L+K SSLA
Sbjct: 111 AEIIRSALSSVDRGQWDAAKSVGFSYWQTMRHVIVPQSVRIALPPLANVMLDLVKASSLA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +L      +  +    + + ++   IY ++   IAL  + L  +  +  KK
Sbjct: 171 AMITVPELFQQAKIVGGREFDYMTMYILVALIYWAICSGIALLQDFLEKRTEVYIKK 227



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 40/85 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G  NT +++F+ M    I+G  +  GR+S   L+ W  R+Y+   R +P LV++F 
Sbjct: 21  YVMQGIWNTLFISFASMFAGLILGFFIALGRMSGLALLRWPARIYISFMRGVPILVILFI 80

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           LY     +            G  +N
Sbjct: 81  LYFGFPYIGIQFTALAAALIGFSIN 105


>gi|224437619|ref|ZP_03658572.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter cinaedi CCUG 18818]
          Length = 252

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 18/236 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P         +   +  LS    T+  +    + + + G +  + A         K  K
Sbjct: 29  NPFALWKFADMLSHADEFLSGFGYTLSVSCLALLIALIFGTIGGVMA-----TSRFKILK 83

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A   +Y+  F     P ++ I   Y           F           F    + +  Y 
Sbjct: 84  AYTRIYVEIF--QNTPLVIQIFFLY-----------FALHPLGIHLDVFSVGVLGVGAYH 130

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+++E+VRSG+++VP+GQ EA+ + G T+ +  R ++LPQ ++ I+PPLT+Q +NL+KN
Sbjct: 131 GAYVSEVVRSGILSVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPLTNQMVNLIKN 190

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +S+ + V   +++ V  +    T       L    +Y  +   +A F      ++ 
Sbjct: 191 TSVLLIVAGGEIMYVADSYAGDTSNYAPAYLFTALLYFIVCYPLAYFAKFYEDRLK 246



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 46/90 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+A   L GF  T  ++   ++ A I GT+ G    S  K++    R+YVE+F+N P ++
Sbjct: 41  SHADEFLSGFGYTLSVSCLALLIALIFGTIGGVMATSRFKILKAYTRIYVEIFQNTPLVI 100

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            IFFLY ++  +    D   V   G+   +
Sbjct: 101 QIFFLYFALHPLGIHLDVFSVGVLGVGAYH 130


>gi|169828294|ref|YP_001698452.1| glutamine transport system permease [Lysinibacillus sphaericus
           C3-41]
 gi|168992782|gb|ACA40322.1| Glutamine transport system permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 241

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 90/224 (40%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI-- 229
               L     T+  +    +    +G  + +  T   R    K      + +I T  +  
Sbjct: 14  WQMFLRGAYYTLLISTISTIIGAFIGFFIGIMHTIPVRKKGVKFYSLKLINFILTCYVEF 73

Query: 230 -FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y              I          +  + +S  T A++AEIVR G
Sbjct: 74  FRGTPMIVQAMVVYYG----------LDIAFGIDMHFITAGILVVSLNTGAYMAEIVRGG 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++++  GQ EAA A+G+ H +    V+LPQ  R+++P   +Q +  +K++++   +G  +
Sbjct: 124 IVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQLIMNIKDTAVLNVIGVTE 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L     +I     +  E   +   +Y  ++   +  +  +  ++
Sbjct: 184 LFFQTKSISGNNFRYFESFFVACILYFIMTFTASRILLYVEKRL 227



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 10/77 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAG----------RLSANKLVAWICRVYVEV 135
               L G   T  ++    I    IG  +G            +  + KL+ +I   YVE 
Sbjct: 14  WQMFLRGAYYTLLISTISTIIGAFIGFFIGIMHTIPVRKKGVKFYSLKLINFILTCYVEF 73

Query: 136 FRNIPPLVVIFFLYKSV 152
           FR  P +V    +Y  +
Sbjct: 74  FRGTPMIVQAMVVYYGL 90


>gi|302339795|ref|YP_003805001.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636980|gb|ADK82407.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 213

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +++V + +  + L++F   L R    K    +  LY   F   G P L+ +   Y  
Sbjct: 17  LTLQLYVVTLLFALPLAIF-CALGRVSGPKALDRVLGLYGWIF--RGTPLLLQLFFFYYG 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I G ++SP F++  +       A+  EI R G+ ++  GQ EAA AL 
Sbjct: 74  LT----------IFGISLSP-FLAASLTFVLNYGAYFMEIFRGGIESIDSGQYEAAKALN 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + + +  R ++LPQA+R ++PP T++ + L+K+++L V +G  +L+     I  +   ++
Sbjct: 123 MNYWQTMRRIILPQAVRVVLPPTTNEAITLVKDTALVVVIGMGELLRSAKEIFTRDF-SL 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +   +YL ++ ++  F   L  ++A  +
Sbjct: 182 TPFAVAAILYLLMTSVVIRFFRYLERRMAYYD 213



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 33/94 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    ++ A  +      GR+S  K +  +  +Y  +FR  P L+ +FF 
Sbjct: 11  LLQGCILTLQLYVVTLLFALPLAIFCALGRVSGPKALDRVLGLYGWIFRGTPLLLQLFFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           Y  +          +       LN          
Sbjct: 71  YYGLTIFGISLSPFLAASLTFVLNYGAYFMEIFR 104


>gi|300767694|ref|ZP_07077604.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|300494679|gb|EFK29837.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
          Length = 213

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
              +  +     T+ ++    VFS ++G + ++F    SR     T + +  +YI  F  
Sbjct: 7   HYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P LV+    Y +                     F +  I L+ YT++FIAE VR+G+
Sbjct: 60  RNIPLLVIAMFFYVI-----------IPMYVAKIDGFTAGTIGLTIYTSSFIAETVRAGI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQME A A G+T+ +A   ++LPQA + IIPPL +Q++NL+KNSS+   V   DL
Sbjct: 109 QSVDPGQMEGARANGMTYWQAMSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGFDL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    +I + +   I   ++    YL +++ ++ +M  L  K+A
Sbjct: 169 MYQANSIASLSLDTINSYVVVGVFYLIITLPLSYYMRHLEKKLA 212



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 43/92 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + ++ G   T   +   ++ +TIIGT+     +  ++ +  I RVY+E+FRNIP LV+
Sbjct: 8   YWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLLVI 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
             F Y  +   +   D       G+ +     
Sbjct: 68  AMFFYVIIPMYVAKIDGFTAGTIGLTIYTSSF 99


>gi|86609572|ref|YP_478334.1| cystine ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558114|gb|ABD03071.1| cystine ABC transporter, permease protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 248

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                F +  + T  ++ + S +    L+ F + L+         +L  LY+S  L+ G 
Sbjct: 41  REWWWFISQGVGTTFQLSLVSILCATTLA-FLSALAGLSQIAPLSSLSALYVS--LMRGT 97

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P  +     YQ       L Q   + GS     F S  +ALS    A+++EI R+G+ A+
Sbjct: 98  PLFLQFLFIYQ------ALPQLGLVFGS-----FTSAVLALSLNYGAYMSEIFRAGIQAI 146

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA ALGL   +    ++LPQA R ++P + +Q++ + K+++LA A+   +L+  
Sbjct: 147 PIGQREAAYALGLKPWQTLWCIILPQAFRIVLPDIGNQFIAMQKDTALASAIALQELMGR 206

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                       E +++    Y  L+++++ F  RL   +A 
Sbjct: 207 ARQAGLPRQHFFEALVVAALWYWLLTLILSFFQGRLERYLAR 248



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 37/106 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G   TF L+   ++ AT +  L     LS    ++ +  +YV + R  P  + 
Sbjct: 43  WWWFISQGVGTTFQLSLVSILCATTLAFLSALAGLSQIAPLSSLSALYVSLMRGTPLFLQ 102

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             F+Y+++  +  +          + LN              A   
Sbjct: 103 FLFIYQALPQLGLVFGSFTSAVLALSLNYGAYMSEIFRAGIQAIPI 148


>gi|229028210|ref|ZP_04184350.1| Amino acid ABC transproter, permease [Bacillus cereus AH1271]
 gi|228733084|gb|EEL83926.1| Amino acid ABC transproter, permease [Bacillus cereus AH1271]
          Length = 230

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +    M      L    +T+       V   ++G++ + F     R    K   ++  +Y
Sbjct: 1   MFEIFMSTYPTLLKATIVTLQLTLTSLVLGSLIGLLFAFF-----RISSNKILNSIAHVY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   +I G P +V IA+ Y              I    V   F +  IAL+ +  A+I E
Sbjct: 56  I--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWAGAIALAIHNGAYITE 101

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL +Q++  LK+SSL   
Sbjct: 102 IFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRQSLPPLGNQFIIGLKDSSLVAY 161

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           VG ++L   G +I     Q ++  +I    YL L ++   F+N L  ++  KE
Sbjct: 162 VGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 39/88 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  L  + ++  ++IG L    R+S+NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATIVTLQLTLTSLVLGSLIGLLFAFFRISSNKILNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVVVFTPFWAGAIALAIHNGAYI 99


>gi|126654038|ref|ZP_01725869.1| hypothetical protein BB14905_15635 [Bacillus sp. B14905]
 gi|126589472|gb|EAZ83617.1| hypothetical protein BB14905_15635 [Bacillus sp. B14905]
          Length = 241

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 90/226 (39%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLYIST 226
               L     T+  +    +    +G  + +  T   R      +  K    +   Y+  
Sbjct: 14  WQMFLRGAYYTLLISTISTIIGAFIGFFIGIMHTIPVRKKGVKFYGLKLINFILTCYVEF 73

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V   + Y              I          +  + +S  T A++AEIVR
Sbjct: 74  F--RGTPMIVQAMVVYYG----------LDIAFGIDMHFITAGILVVSLNTGAYMAEIVR 121

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G++++  GQ EAA A+G+ H +    V+LPQ  R+++P   +Q +  +K++++   +G 
Sbjct: 122 GGIVSIDNGQYEAASAIGMNHFQIMLHVVLPQVARNVLPATGNQLIMNIKDTAVLNVIGV 181

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L     +I     +  E   +   +Y  ++   +  +  +  ++
Sbjct: 182 TELFFQTKSISGNNFRYFESFFVACILYFIMTFTASRILLYVEKRL 227



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 10/77 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAG----------RLSANKLVAWICRVYVEV 135
               L G   T  ++    I    IG  +G            +    KL+ +I   YVE 
Sbjct: 14  WQMFLRGAYYTLLISTISTIIGAFIGFFIGIMHTIPVRKKGVKFYGLKLINFILTCYVEF 73

Query: 136 FRNIPPLVVIFFLYKSV 152
           FR  P +V    +Y  +
Sbjct: 74  FRGTPMIVQAMVVYYGL 90


>gi|322513148|ref|ZP_08066280.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinobacillus ureae ATCC 25976]
 gi|322121080|gb|EFX92903.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinobacillus ureae ATCC 25976]
          Length = 238

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 104/247 (42%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +++L  +P  D + V            +   +++      F+    + + ++L     
Sbjct: 1   MLENLLLQIPFMDEARVKLVMDAFFPMVEAAVLVSIPLAIASFIIGMAIAVGVALIRVTP 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +   A+  +YIS  +I G P LV I++ +                         
Sbjct: 61  VNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY-----------GLPAIGVYIDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R  +PPL
Sbjct: 108 AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY     ++ L   +
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWVLFLIQAK 227

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 228 LECRFNR 234


>gi|194016790|ref|ZP_03055403.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus ATCC 7061]
 gi|194011396|gb|EDW20965.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bacillus pumilus ATCC 7061]
          Length = 218

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 13/220 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             + F    +     I V S  LG +L +  T L +    K    L   Y S F   G P
Sbjct: 9   PQMPFILEGLKVTLSIVVVSLFLGFILGILLT-LCKISVFKPLIWLADFYTSIF--RGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ + + Y   F  P L  F          ++ +   A S  +AA+++EI+R+G+ A+ 
Sbjct: 66  LVLQLLIIY---FGLPQLLGFQI-------DQYWAAVAAFSLNSAAYVSEIIRAGINAID 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA+ALG+ + K  + +LLPQA ++I P L ++ + L K S++   +G  D++   
Sbjct: 116 KGQKEAAVALGIPYAKMMKDLLLPQAFKNISPALVNETITLTKESAIVTVIGLGDVMRRA 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 T   +E ++    IY  + +++      +  K+ 
Sbjct: 176 YQAGAVTYNYLEPLIFAGLIYYVIVLVLTFVGKSVERKLK 215



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    +    I+G L+   ++S  K + W+   Y  +FR  P ++ +  +
Sbjct: 14  ILEGLKVTLSIVVVSLFLGFILGILLTLCKISVFKPLIWLADFYTSIFRGTPLVLQLLII 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
           Y  +  +L             F
Sbjct: 74  YFGLPQLLGFQIDQYWAAVAAF 95


>gi|255262995|ref|ZP_05342337.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62]
 gi|255105330|gb|EET48004.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thalassiobium sp. R2A62]
          Length = 267

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 120/259 (46%), Gaps = 4/259 (1%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           ++   +P  V ++ +    +  L       +     +       +            +  
Sbjct: 11  KMMNTLPLGVGLYLIIVGGIVWLAYSGAQQMGYNWQWYQIPKYIYTFTDDGFQLGEILKG 70

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             + IVLS+     S  F    G  + LL +S  ++     +  +     +     +   
Sbjct: 71  LWVTIVLSVV----SFTFATVLGLGIALLRLSGLVVGKGVAIGYLEFIRNIPLLVLLYLF 126

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           +  +G       + +  + L  + +A I+EI R+G+ +V +GQ EAA ++G++  +A R 
Sbjct: 127 YYVLGPVFGFDRWSAAVLTLGVFHSALISEIFRAGINSVDKGQWEAAASIGMSRGQAYRY 186

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ++R ++PPL  ++++L+K+S++   +  A+L ++G  II+ T  + EI      +
Sbjct: 187 IILPQSVRFMLPPLFGEFVHLIKSSAIVSVIAVAELTTIGRNIISDTYMSFEIWFTIAAV 246

Query: 374 YLSLSIMIALFMNRLNAKI 392
           YL+L+++++  ++ L  + 
Sbjct: 247 YLALTLVLSFGVSALERRF 265



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           ++I + I  +T D      IL G   T  L+      AT++G  +   RLS   +   + 
Sbjct: 48  YQIPKYIYTFTDDGFQLGEILKGLWVTIVLSVVSFTFATVLGLGIALLRLSGLVVGKGVA 107

Query: 130 RVYVEVFRNIP 140
             Y+E  RNIP
Sbjct: 108 IGYLEFIRNIP 118


>gi|229134354|ref|ZP_04263167.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
 gi|228648975|gb|EEL04997.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
          Length = 222

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +             +     I V S ++   + +    ++++   KT    P+  +
Sbjct: 1   MKFDVAYFLESFPQLFKYVYITLGITVVSMIISFFIGIGLAIITKN---KTKFLYPIARV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G P LV +   + L+F  P +         TV     +  I LS   AA+++EI
Sbjct: 58  YISFFRGTPLLVQL---FVLYFGLPQIS-----PAFTVLTAMQATLIGLSLNNAAYLSEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L AV  GQM+A +++G+T  +A R ++ PQA+R  +P   + ++ LLK SSL+ A+
Sbjct: 110 IRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSFGNNFVGLLKESSLSFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G A++++    +  Q+ + +E  L    +Y  ++I+I+    RL  K+
Sbjct: 170 GVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKRLEKKL 217



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    MI +  IG  +     +  K +  I RVY+  FR  P LV +F LY  +  +
Sbjct: 22  TLGITVVSMIISFFIGIGLAIITKNKTKFLYPIARVYISFFRGTPLLVQLFVLYFGLPQI 81

Query: 156 LPIPDHSIVLP 166
            P       + 
Sbjct: 82  SPAFTVLTAMQ 92


>gi|300721603|ref|YP_003710878.1| putative amino acid ABC transporter membrane protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628095|emb|CBJ88646.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 238

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     + + +F LGI L  F   L R +  K    + ++    +LI G P L
Sbjct: 14  WPMLYAGLTFTIPLTLITFALGISLG-FIVALIRLYGPKPL--IAVVRFYVWLIRGTPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L +                       F S  I  +    A+ +E++R+ LI+VP+G
Sbjct: 71  VQLFLIFY-----------ALPSVGITLEAFTSAVIGFTLNVGAYTSEVIRAALISVPKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+ ++G++  ++ R ++LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 120 QWEASHSIGMSWWQSLRRIVLPQAARFSIPPLSNTFISLVKDTSLASVITVPEMFLAAQR 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I   T Q + +      +YL LS +++    RL  K A +
Sbjct: 180 IAAVTYQPLILYTEAAILYLLLSSVLSALQVRLEKKFAQQ 219



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +  G   T  L          +G +V   RL   K +  + R YV + R  P L
Sbjct: 11  DSLWPMLYAGLTFTIPLTLITFALGISLGFIVALIRLYGPKPLIAVVRFYVWLIRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++ ++ SV    +       G  LN
Sbjct: 71  VQLFLIFYALPSVGITLEAFTSAVIGFTLN 100


>gi|218548381|ref|YP_002382172.1| arginine transporter permease subunit ArtQ [Escherichia fergusonii
           ATCC 35469]
 gi|218355922|emb|CAQ88537.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia fergusonii ATCC 35469]
 gi|323976753|gb|EGB71841.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324112656|gb|EGC06632.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325496804|gb|EGC94663.1| arginine transporter permease subunit ArtQ [Escherichia fergusonii
           ECD227]
          Length = 238

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGIVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|197284575|ref|YP_002150447.1| arginine transporter permease subunit ArtQ [Proteus mirabilis
           HI4320]
 gi|227356757|ref|ZP_03841142.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Proteus mirabilis ATCC 29906]
 gi|194682062|emb|CAR41587.1| arginine ABC transporter, permease protein [Proteus mirabilis
           HI4320]
 gi|227163047|gb|EEI47982.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Proteus mirabilis ATCC 29906]
          Length = 234

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 10/233 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              ++       T   + + + ++G+VL++  T        K    L   +++       
Sbjct: 1   MNEITTLAGATVTTVTLAISALIIGLVLAMLFTAW-ESAKWKAFAFLGTCWVTLIRGL-P 58

Query: 233 PTLVLIALKYQLHFDKPVLGQ--------FNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             LV++ + Y       +L            F  G T S  F    IALS   A++ ++ 
Sbjct: 59  EMLVVLFVYYGTLQGVMMLMDGIELGPFTLQFDFGDTESLPFYCGVIALSLLYASYASQT 118

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L AVP GQ EA  ALG+         ++PQ  R  +P L +Q+L LLK+++L   +
Sbjct: 119 LRGALKAVPTGQWEAGQALGMGKITIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLI 178

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              DL+    +I N+T +      I   IYL+++++    +  L  +    E+
Sbjct: 179 SVNDLMLQTQSIANRTQEPFTWYSIVALIYLAITLVSQYILKWLEMRTTRFER 231


>gi|148544725|ref|YP_001272095.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184154077|ref|YP_001842418.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|227363850|ref|ZP_03847955.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|227544432|ref|ZP_03974481.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908279|ref|ZP_07125744.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|325683060|ref|ZP_08162576.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus reuteri MM4-1A]
 gi|68160714|gb|AAY86803.1| lr0524 [Lactobacillus reuteri]
 gi|148531759|gb|ABQ83758.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183225421|dbj|BAG25938.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|227071077|gb|EEI09395.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|227185595|gb|EEI65666.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300894526|gb|EFK87883.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|324977410|gb|EGC14361.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus reuteri MM4-1A]
          Length = 212

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L+    T+  +    + S ++G   +L           +  K +  +Y+  F   
Sbjct: 8   EWHPLLTGLWNTILCSLIALIGSLIIGTFFALLE-----ISQHRVLKIIGHVYVEVFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L++I + + L     V+              F +  I L+ YT+AFIAE VR+G+ 
Sbjct: 63  P---LLVITMAFFLIIPMYVVK----------INGFTAGTIGLTLYTSAFIAETVRAGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQME A+A GLT+ +A R ++LPQA R +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 SIDPGQMEGALANGLTYGQAMRYIVLPQAFRVVIPPLGNQFINLVKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  I N T   +    I   +YL +++ ++ +M  L  K+A
Sbjct: 170 YQGNLIANDTLATMPTYFIVGIMYLIITLPLSYYMRHLEKKLA 212



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 40/88 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT   +   +I + IIGT      +S ++++  I  VYVEVFRNIP LV+    
Sbjct: 12  LLTGLWNTILCSLIALIGSLIIGTFFALLEISQHRVLKIIGHVYVEVFRNIPLLVITMAF 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +  +   +   +       G+ L     
Sbjct: 72  FLIIPMYVVKINGFTAGTIGLTLYTSAF 99


>gi|218283465|ref|ZP_03489465.1| hypothetical protein EUBIFOR_02055 [Eubacterium biforme DSM 3989]
 gi|218215847|gb|EEC89385.1| hypothetical protein EUBIFOR_02055 [Eubacterium biforme DSM 3989]
          Length = 240

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 12/233 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            +  V    +F     ++     + T A   V   V GI         S           
Sbjct: 9   WNIFVRNIPLFQYGIEMTLLFAFVGTFAGFVVGLLVGGIRAIEINEYDSTVIKVLKNIGR 68

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            +  +  ++  G P +V     Y  +  KPV+G               +  I +S  T A
Sbjct: 69  IITGLYIWIFRGTPMMVQAMFIY--YAGKPVIG----------WTPITAGLIIISINTGA 116

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AEI+RSG+ +V +GQ EAA++LG+T  +    V+ PQA+++  P + +Q +  +K+SS
Sbjct: 117 YMAEIIRSGIQSVDKGQNEAAMSLGMTTMQTLMYVVFPQAIKNSFPSIGNQLIVNIKDSS 176

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +   +L     ++     + +E  L+   +YL L+ + +  +N L  ++
Sbjct: 177 MLNVITVTELYFQTTSVAGSNYRVMETFLVSAILYLILTTLASFLLNYLEKRM 229


>gi|325841308|ref|ZP_08167409.1| putative arginine ABC transporter, permease protein ArtQ
           [Turicibacter sp. HGF1]
 gi|325489989|gb|EGC92336.1| putative arginine ABC transporter, permease protein ArtQ
           [Turicibacter sp. HGF1]
          Length = 220

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A    F  + G VL++      +    K  + +   YI   +I G P L+ +   Y  
Sbjct: 26  LAAITVFFGMIFGAVLAII-----KLSKSKIVQFISTAYIE--IIRGTPLLLQL---YFF 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P    F          ++  + IAL   ++A++AEI+R+G+ AV +GQMEAA +LG
Sbjct: 76  WLFLPKYLPFEI-------SDWTCIVIALVINSSAYVAEIIRAGIQAVDKGQMEAAKSLG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++       ++ PQA+++I+P L ++++ ++K +SLA      DL++    I + T + I
Sbjct: 129 MSDVHMMTRIIFPQAVKNILPALGNEFIMMVKETSLASVFFINDLMTSYQMIKSATFKPI 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++I   IY  ++  ++  +  +  ++++ +
Sbjct: 189 APLMITAVIYFIVTFSLSKVVKAMEGRLSVSD 220



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y      G   T  LA   +    I G ++   +LS +K+V +I   Y+E+ R  P L
Sbjct: 10  DQYWYVFSEGLGGTLSLAAITVFFGMIFGAVLAIIKLSKSKIVQFISTAYIEIIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIV 164
           + ++F +  +   LP       
Sbjct: 70  LQLYFFWLFLPKYLPFEISDWT 91


>gi|293409237|ref|ZP_06652813.1| arginine transporter permease subunit ArtQ [Escherichia coli B354]
 gi|331672401|ref|ZP_08373192.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA280]
 gi|284920715|emb|CBG33778.1| arginine ABC transporter, permease protein [Escherichia coli 042]
 gi|291469705|gb|EFF12189.1| arginine transporter permease subunit ArtQ [Escherichia coli B354]
 gi|331070596|gb|EGI41960.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA280]
          Length = 238

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|256827732|ref|YP_003151691.1| amino acid ABC transporter membrane protein [Cryptobacterium curtum
           DSM 15641]
 gi|256583875|gb|ACU95009.1| amino acid ABC transporter membrane protein [Cryptobacterium curtum
           DSM 15641]
          Length = 212

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 11/208 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A+IF  + V  + L +    L R    K    L   YIS  ++ G P ++ +     +
Sbjct: 11  LTAQIFFVTLVGALPLGVVV-ALCRMSRFKPLAWLAAFYIS--VLRGTPLMLQLMALMFV 67

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +       F    GS     F +  I      AA+ AEI RSG+ ++PRGQ EAA  LG
Sbjct: 68  PY-----YLFGLQLGSDWK--FWACDIGFVINYAAYFAEIYRSGIQSIPRGQYEAAEVLG 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +    ++LPQ  + I+P + ++ + L+K++SLA  +G  ++ +    I   +  ++
Sbjct: 121 YTRGQTFMRIVLPQVFKRILPSMGNEVITLVKDTSLAFVLGIMEMFTQAKAIAA-SQVSM 179

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
              L+   IY    ++I   + R   ++
Sbjct: 180 TPYLVAAAIYWVCCLIIEFILRRAEKRL 207



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  + F  ++ A  +G +V   R+S  K +AW+   Y+ V R  P ++ +  L
Sbjct: 5   LGSGLTLTAQIFFVTLVGALPLGVVVALCRMSRFKPLAWLAAFYISVLRGTPLMLQLMAL 64

Query: 149 YKS 151
              
Sbjct: 65  MFV 67


>gi|221369815|ref|YP_002520911.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221162867|gb|ACM03838.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 219

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L++    +  +     YI    I G P L+ I + Y   F  P L           
Sbjct: 39  LLAALAQRSDLRLVRGAAAFYIWF--IRGTPALIQIFIIY---FGLPQL--------GLR 85

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  IAL   + A++AEIVRSGL A+ RGQ E+A+ALG +  +  R ++LPQ  R 
Sbjct: 86  LSPFTAGVIALGINSGAYVAEIVRSGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRI 145

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+P +T++ ++ LKN+SL   +   +L     T+I+ T +  +  +    IYL L+ ++ 
Sbjct: 146 ILPSITNEAISTLKNTSLLSTITVVELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLT 205

Query: 383 LFMNRLNAKIAL 394
              N    + A 
Sbjct: 206 QIANWAERRYAR 217


>gi|148653870|ref|YP_001280963.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148572954|gb|ABQ95013.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 246

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 2/211 (0%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ + S  +G+VL L     ++       + L  +Y +T        LVL  L Y    
Sbjct: 19  IKLALSSLAIGLVLGLLG-ATAKLSKIWILRKLATVYTATMRGIPELLLVL-FLYYGGSM 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               + Q            F++  +ALS    A+  E+ R  +  +P+GQ EAA A+G+ 
Sbjct: 77  LIMAILQKFGYNDYVEVSPFLAGVLALSIAFGAYATEVFRMAIQEIPKGQWEAAEAIGMK 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    +++PQ  R  +P L + +L LLK+++L   VG  D++         T QA   
Sbjct: 137 PMQLYFRIIVPQVWRLALPGLGNLFLVLLKDTALVSVVGLKDIMYHAARGAQATQQAFTF 196

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   FIYL L+I++  FM  L  +    ++
Sbjct: 197 YMAAAFIYLGLTIVVTAFMMWLEWRANPSKR 227



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 37/90 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G + T  LA S +    ++G L    +LS   ++  +  VY    R IP L++
Sbjct: 7   FGHLLLSGSLITIKLALSSLAIGLVLGLLGATAKLSKIWILRKLATVYTATMRGIPELLL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           + FLY     ++            + ++  
Sbjct: 67  VLFLYYGGSMLIMAILQKFGYNDYVEVSPF 96


>gi|308172227|ref|YP_003918932.1| amino acid ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307605091|emb|CBI41462.1| similar to amino acid ABC transporter (permease) [Bacillus
           amyloliquefaciens DSM 7]
          Length = 216

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VF+ + G++L+L                L  +YIS F   G+PTLV + L Y   +
Sbjct: 20  VAAMVFAVIGGLILALITKN-----RIPVLHQLSKVYISFF--RGVPTLVQLFLIY---Y 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L       G +      +  I LS   AA++AEI R+ L +V  GQ+EA +++G+T
Sbjct: 70  GLPQL-----FPGMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDEGQLEACLSVGMT 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R ++ PQA+R+ +P   + ++ LLK +SLA  +G  ++ + G    +   +  E 
Sbjct: 125 KSQAYRRIIFPQAIRNALPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFET 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L    +Y  L+I+ ++  + L   I+   +
Sbjct: 185 YLAVAIMYWILTIIYSVLQDLLERAISKPYR 215



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A++     T  +A + M+ A I G ++     +   ++  + +VY+  FR +P LV +F 
Sbjct: 7   ALIEALPITLVMAVAAMVFAVIGGLILALITKNRIPVLHQLSKVYISFFRGVPTLVQLFL 66

Query: 148 LYKSVLSVLPIPDHSIVL 165
           +Y  +  + P       L
Sbjct: 67  IYYGLPQLFPGMSKMTAL 84


>gi|218550554|ref|YP_002384345.1| amino-acid ABC transporter membrane protein [Escherichia fergusonii
           ATCC 35469]
 gi|218358095|emb|CAQ90741.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
          Length = 367

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|288554810|ref|YP_003426745.1| amino acid ABC transporter permease [Bacillus pseudofirmus OF4]
 gi|288545970|gb|ADC49853.1| amino acid ABC transporter permease [Bacillus pseudofirmus OF4]
          Length = 233

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/244 (24%), Positives = 112/244 (45%), Gaps = 15/244 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +L          +    + +N+       L +     +F   F L + L L   R+S+++
Sbjct: 1   MLEWFNQIQWEYLYDPELAVNSLPFLLEGLKVTMIIALFSMVFALILGLLLGIARMSKYW 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +         I    + G P LV I +   L++  PVL       G       ++  +
Sbjct: 61  FIRWPAK-----IYISFMRGTPLLVFIFI---LYYGIPVL-------GVEFKSAIVAGIV 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +S   AA+ AE+VRS +++VPRGQ EAA +L +++ +  R V++PQA R  +PP  + +
Sbjct: 106 GISLNFAAYNAEVVRSAIMSVPRGQWEAAASLQMSYVQTLRRVIIPQATRIALPPTFNIF 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++++K +SLA  +   +L+     +  +T  ++ + +    IY  + I+I  F  RL  +
Sbjct: 166 MDIVKGTSLASVITVQELLYSSRLVAGRTFDSMTMYITAALIYWVVCIIIGYFQERLEKR 225

Query: 392 IALK 395
               
Sbjct: 226 YNRY 229



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   M+ A I+G L+G  R+S    + W  ++Y+   R  P LV IF L
Sbjct: 26  LLEGLKVTMIIALFSMVFALILGLLLGIARMSKYWFIRWPAKIYISFMRGTPLLVFIFIL 85

Query: 149 YKSVL 153
           Y  + 
Sbjct: 86  YYGIP 90


>gi|260886618|ref|ZP_05897881.1| L-cystine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|330839549|ref|YP_004414129.1| polar amino acid ABC transporter, inner membrane subunit
           [Selenomonas sputigena ATCC 35185]
 gi|260863761|gb|EEX78261.1| L-cystine ABC transporter, permease protein [Selenomonas sputigena
           ATCC 35185]
 gi|329747313|gb|AEC00670.1| polar amino acid ABC transporter, inner membrane subunit
           [Selenomonas sputigena ATCC 35185]
          Length = 214

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 95/183 (51%), Gaps = 9/183 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  K  PL  +  F I+ +    L+     ++F  P++            P+  +  +A 
Sbjct: 40  RISKLGPLCLLMEFYIWLMRGTPLMLQLLFVYFALPMV--------GIRLPDIAAALLAF 91

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +   AA+ AEI R+G+ ++ RGQ EAA +LG+T+ +  R +++PQ +R ++PP++++ +N
Sbjct: 92  TLNYAAYFAEIFRAGIQSIGRGQYEAAKSLGMTYTQTMRRIIVPQMIRHVLPPVSNETIN 151

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K++SL   +   DL+ V  TI+ +    +    +    YL+++ ++     +L A   
Sbjct: 152 LVKDTSLIYILAMNDLLRVARTIVQREFD-MTPFFVAAVFYLAMTFVLTWGFKKLEAYYG 210

Query: 394 LKE 396
             +
Sbjct: 211 KYD 213


>gi|330829215|ref|YP_004392167.1| histidine/lysine/arginine/ornithine ABC transporter permease
           [Aeromonas veronii B565]
 gi|328804351|gb|AEB49550.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           protein [Aeromonas veronii B565]
          Length = 230

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 5/216 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   S +LG++L++    L R+      K     YI  F   G P L
Sbjct: 10  WPTYWEGLYTTVWLVALSLILGLMLAVPMGIL-RNSRNWLIKGPIWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y        L   N    S  S  +    +A +  TAA+ AEIVR  +  +PRG
Sbjct: 67  VQLFIIYYGAAQWEWLK--NSAAWSLFSEAWFCALLAFTLNTAAYTAEIVRGAVHNMPRG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA A G+T  +    ++LP + R  +P  +++ + +L+ S++A  +   DL      
Sbjct: 125 QIEAANAFGMTRWQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARI 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I ++     E  L    +Y+ L+ +I     +  A+
Sbjct: 185 INSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWEAR 220



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 37/105 (35%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 G   T WL    +I   ++   +G  R S N L+      Y+  FR  P LV +
Sbjct: 10  WPTYWEGLYTTVWLVALSLILGLMLAVPMGILRNSRNWLIKGPIWAYIYFFRGTPLLVQL 69

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           F +Y        + + +    F        L+F   T    A+I 
Sbjct: 70  FIIYYGAAQWEWLKNSAAWSLFSEAWFCALLAFTLNTAAYTAEIV 114


>gi|331649071|ref|ZP_08350159.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli M605]
 gi|330909321|gb|EGH37835.1| glutamate Aspartate transport system permease protein GltK
           [Escherichia coli AA86]
 gi|331042818|gb|EGI14960.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli M605]
          Length = 367

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|317046297|ref|YP_004113945.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316947914|gb|ADU67389.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 509

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 104/227 (45%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL    L +         ++ V +   GI++  F   L+        +    +YI T  +
Sbjct: 5   FLKYLTLPYLWQGAVIAVELLVGALAGGILIGFFL-ALASTSKYLFIRLPVKIYIYT--L 61

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y       VL +F           F S  +AL     AF AEI+R G+
Sbjct: 62  RGTPVLLQLILLYN------VLPEFGL-----RFSPFTSALLALMINETAFCAEIIRGGI 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A  R Q  AA A G +  K    V++PQA+R+I+P + ++ + LLK++SLA  VG  +L
Sbjct: 111 MATDRDQSMAAQAFGYSRTKEMIHVVIPQALRAILPTMGNETVGLLKSTSLASVVGVNEL 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G  I++Q    I +++    IYL LS ++A     +     L E
Sbjct: 171 TMRGQAIVSQNFLFIPVLVASGGIYLILSTLLAGGQWWMEKFYNLDE 217



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 28/101 (27%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V    L    +    +IG  +     S    +    ++Y+   R  P L+ +  
Sbjct: 13  YLWQGAVIAVELLVGALAGGILIGFFLALASTSKYLFIRLPVKIYIYTLRGTPVLLQLIL 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           LY  +                + +N        +     A 
Sbjct: 73  LYNVLPEFGLRFSPFTSALLALMINETAFCAEIIRGGIMAT 113


>gi|16128830|ref|NP_415383.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112232|ref|NP_706742.1| arginine transporter permease subunit ArtQ [Shigella flexneri 2a
           str. 301]
 gi|26246885|ref|NP_752925.1| arginine transporter permease subunit ArtQ [Escherichia coli
           CFT073]
 gi|30062344|ref|NP_836515.1| arginine transporter permease subunit ArtQ [Shigella flexneri 2a
           str. 2457T]
 gi|74311406|ref|YP_309825.1| arginine transporter permease subunit ArtQ [Shigella sonnei Ss046]
 gi|82543350|ref|YP_407297.1| arginine transporter permease subunit ArtQ [Shigella boydii Sb227]
 gi|89107713|ref|AP_001493.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|110804859|ref|YP_688379.1| arginine transporter permease subunit ArtQ [Shigella flexneri 5
           str. 8401]
 gi|157157070|ref|YP_001462060.1| arginine transporter permease subunit ArtQ [Escherichia coli
           E24377A]
 gi|157160385|ref|YP_001457703.1| arginine transporter permease subunit ArtQ [Escherichia coli HS]
 gi|170020735|ref|YP_001725689.1| arginine transporter permease subunit ArtQ [Escherichia coli ATCC
           8739]
 gi|170080521|ref|YP_001729841.1| arginine ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170680675|ref|YP_001742970.1| arginine transporter permease subunit ArtQ [Escherichia coli
           SMS-3-5]
 gi|188493002|ref|ZP_03000272.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           53638]
 gi|191166206|ref|ZP_03028040.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           B7A]
 gi|193064495|ref|ZP_03045576.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E22]
 gi|194428219|ref|ZP_03060762.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           B171]
 gi|194438384|ref|ZP_03070474.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           101-1]
 gi|209918111|ref|YP_002292195.1| arginine transporter permease subunit ArtQ [Escherichia coli SE11]
 gi|215485993|ref|YP_002328424.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218553448|ref|YP_002386361.1| arginine transporter permease subunit ArtQ [Escherichia coli IAI1]
 gi|218694336|ref|YP_002402003.1| arginine transporter permease subunit ArtQ [Escherichia coli 55989]
 gi|218699238|ref|YP_002406867.1| arginine transporter permease subunit ArtQ [Escherichia coli IAI39]
 gi|227884174|ref|ZP_04001979.1| arginine transporter subunit [Escherichia coli 83972]
 gi|238900121|ref|YP_002925917.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|253774108|ref|YP_003036939.1| arginine transporter permease subunit ArtQ [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160977|ref|YP_003044085.1| arginine transporter permease ArtQ [Escherichia coli B str. REL606]
 gi|256021017|ref|ZP_05434882.1| arginine transporter permease subunit ArtQ [Shigella sp. D9]
 gi|256023511|ref|ZP_05437376.1| arginine transporter permease subunit ArtQ [Escherichia sp.
           4_1_40B]
 gi|260843113|ref|YP_003220891.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O103:H2 str. 12009]
 gi|260854154|ref|YP_003228045.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O26:H11 str. 11368]
 gi|260867035|ref|YP_003233437.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O111:H- str. 11128]
 gi|293414143|ref|ZP_06656792.1| arginine transporter permease subunit ArtQ [Escherichia coli B185]
 gi|293433160|ref|ZP_06661588.1| arginine transporter permease subunit ArtQ [Escherichia coli B088]
 gi|300817038|ref|ZP_07097257.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300824003|ref|ZP_07104125.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300902395|ref|ZP_07120378.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300924471|ref|ZP_07140441.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300929328|ref|ZP_07144802.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300947047|ref|ZP_07161269.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300957066|ref|ZP_07169311.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300993466|ref|ZP_07180408.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301027624|ref|ZP_07190945.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301051210|ref|ZP_07198039.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|301305366|ref|ZP_07211461.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301325870|ref|ZP_07219303.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301646302|ref|ZP_07246192.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|307137490|ref|ZP_07496846.1| arginine transporter permease subunit ArtQ [Escherichia coli H736]
 gi|307311750|ref|ZP_07591390.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309795343|ref|ZP_07689761.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|312969071|ref|ZP_07783278.1| arginine transport system permease protein artQ [Escherichia coli
           2362-75]
 gi|331641383|ref|ZP_08342518.1| arginine transport system permease protein ArtQ [Escherichia coli
           H736]
 gi|331646130|ref|ZP_08347233.1| arginine transport system permease protein ArtQ [Escherichia coli
           M605]
 gi|331651880|ref|ZP_08352899.1| arginine transport system permease protein ArtQ [Escherichia coli
           M718]
 gi|331667236|ref|ZP_08368101.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA271]
 gi|331676650|ref|ZP_08377346.1| arginine transport system permease protein ArtQ [Escherichia coli
           H591]
 gi|331682371|ref|ZP_08382990.1| arginine transport system permease protein ArtQ [Escherichia coli
           H299]
 gi|83287906|sp|P0AE35|ARTQ_ECOL6 RecName: Full=Arginine ABC transporter permease protein ArtQ
 gi|83287907|sp|P0AE34|ARTQ_ECOLI RecName: Full=Arginine ABC transporter permease protein ArtQ
 gi|83287908|sp|P0AE36|ARTQ_SHIFL RecName: Full=Arginine ABC transporter permease protein ArtQ
 gi|26107285|gb|AAN79468.1|AE016758_72 Arginine transport system permease protein artQ [Escherichia coli
           CFT073]
 gi|1651395|dbj|BAA35576.1| arginine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1787087|gb|AAC73949.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24051079|gb|AAN42449.1| arginine 3rd transport system permease protein [Shigella flexneri
           2a str. 301]
 gi|30040589|gb|AAP16321.1| arginine 3rd transport system permease protein [Shigella flexneri
           2a str. 2457T]
 gi|73854883|gb|AAZ87590.1| arginine 3rd transport system permease protein [Shigella sonnei
           Ss046]
 gi|81244761|gb|ABB65469.1| arginine 3rd transport system permease protein [Shigella boydii
           Sb227]
 gi|110614407|gb|ABF03074.1| arginine 3rd transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|157066065|gb|ABV05320.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           HS]
 gi|157079100|gb|ABV18808.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E24377A]
 gi|169755663|gb|ACA78362.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169888356|gb|ACB02063.1| arginine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170518393|gb|ACB16571.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           SMS-3-5]
 gi|188488201|gb|EDU63304.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           53638]
 gi|190903815|gb|EDV63530.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           B7A]
 gi|192928957|gb|EDV82570.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           E22]
 gi|194413779|gb|EDX30058.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           B171]
 gi|194422608|gb|EDX38605.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           101-1]
 gi|209911370|dbj|BAG76444.1| arginine ABC transporter permease component [Escherichia coli SE11]
 gi|215264065|emb|CAS08407.1| arginine 3rd transport system permease protein ArtQ; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|218351068|emb|CAU96772.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli 55989]
 gi|218360216|emb|CAQ97766.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli IAI1]
 gi|218369224|emb|CAR16979.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli IAI39]
 gi|222032591|emb|CAP75330.1| Arginine transport system permease protein artQ [Escherichia coli
           LF82]
 gi|227838926|gb|EEJ49392.1| arginine transporter subunit [Escherichia coli 83972]
 gi|238860008|gb|ACR62006.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|242376678|emb|CAQ31390.1| artQ, subunit of arginine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325152|gb|ACT29754.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972878|gb|ACT38549.1| arginine transporter subunit [Escherichia coli B str. REL606]
 gi|253977092|gb|ACT42762.1| arginine transporter subunit [Escherichia coli BL21(DE3)]
 gi|257752803|dbj|BAI24305.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O26:H11 str. 11368]
 gi|257758260|dbj|BAI29757.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O103:H2 str. 12009]
 gi|257763391|dbj|BAI34886.1| arginine 3rd transport system permease protein ArtQ [Escherichia
           coli O111:H- str. 11128]
 gi|260449991|gb|ACX40413.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177997|dbj|BAI54327.1| arginine ABC transporter permease component [Escherichia coli SE15]
 gi|281600185|gb|ADA73169.1| Arginine 3rd transport system permease protein [Shigella flexneri
           2002017]
 gi|291323979|gb|EFE63401.1| arginine transporter permease subunit ArtQ [Escherichia coli B088]
 gi|291434201|gb|EFF07174.1| arginine transporter permease subunit ArtQ [Escherichia coli B185]
 gi|299879260|gb|EFI87471.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300297117|gb|EFJ53502.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300316151|gb|EFJ65935.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300405542|gb|EFJ89080.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300406580|gb|EFJ90118.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300419356|gb|EFK02667.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300453330|gb|EFK16950.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300462747|gb|EFK26240.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300523514|gb|EFK44583.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300530390|gb|EFK51452.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300839384|gb|EFK67144.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300847384|gb|EFK75144.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301075459|gb|EFK90265.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306908305|gb|EFN38804.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307552705|gb|ADN45480.1| arginine transport system permease protein [Escherichia coli ABU
           83972]
 gi|308120993|gb|EFO58255.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|309701140|emb|CBJ00438.1| arginine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|312286473|gb|EFR14386.1| arginine transport system permease protein artQ [Escherichia coli
           2362-75]
 gi|312945379|gb|ADR26206.1| arginine transporter permease subunit ArtQ [Escherichia coli O83:H1
           str. NRG 857C]
 gi|313650231|gb|EFS14643.1| arginine transport system permease protein artQ [Shigella flexneri
           2a str. 2457T]
 gi|315060147|gb|ADT74474.1| arginine transporter subunit [Escherichia coli W]
 gi|315135511|dbj|BAJ42670.1| arginine transporter permease subunit ArtQ [Escherichia coli DH1]
 gi|315257898|gb|EFU37866.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315292537|gb|EFU51889.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315619869|gb|EFV00388.1| arginine transport system permease protein artQ [Escherichia coli
           3431]
 gi|320199097|gb|EFW73694.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           EC4100B]
 gi|323155764|gb|EFZ41933.1| arginine transport system permease protein artQ [Escherichia coli
           EPECa14]
 gi|323159684|gb|EFZ45663.1| arginine transport system permease protein artQ [Escherichia coli
           E128010]
 gi|323165795|gb|EFZ51581.1| arginine transport system permease protein artQ [Shigella sonnei
           53G]
 gi|323175516|gb|EFZ61111.1| arginine transport system permease protein artQ [Escherichia coli
           1180]
 gi|323185174|gb|EFZ70539.1| arginine transport system permease protein artQ [Escherichia coli
           1357]
 gi|323190684|gb|EFZ75953.1| arginine transport system permease protein artQ [Escherichia coli
           RN587/1]
 gi|323379295|gb|ADX51563.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323937969|gb|EGB34231.1| inner membrane transport system [Escherichia coli E1520]
 gi|323942779|gb|EGB38944.1| inner membrane transport system [Escherichia coli E482]
 gi|323947114|gb|EGB43125.1| inner membrane transport system [Escherichia coli H120]
 gi|323962975|gb|EGB58547.1| inner membrane transport system [Escherichia coli H489]
 gi|323969574|gb|EGB64862.1| inner membrane transport system [Escherichia coli TA007]
 gi|324015940|gb|EGB85159.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|331038181|gb|EGI10401.1| arginine transport system permease protein ArtQ [Escherichia coli
           H736]
 gi|331044882|gb|EGI17009.1| arginine transport system permease protein ArtQ [Escherichia coli
           M605]
 gi|331050158|gb|EGI22216.1| arginine transport system permease protein ArtQ [Escherichia coli
           M718]
 gi|331065592|gb|EGI37485.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA271]
 gi|331075339|gb|EGI46637.1| arginine transport system permease protein ArtQ [Escherichia coli
           H591]
 gi|331080002|gb|EGI51181.1| arginine transport system permease protein ArtQ [Escherichia coli
           H299]
 gi|332104596|gb|EGJ07942.1| arginine transporter permease subunit ArtQ [Shigella sp. D9]
          Length = 238

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|312959433|ref|ZP_07773950.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311286150|gb|EFQ64714.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 242

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S  + ++L L     ++       +    LY  T LI G+P LVL+ L + 
Sbjct: 28  WMTLKLSVLSLAVSVLLGLLGAS-AKLSSLPFLRIPAQLY--TTLIRGVPDLVLMLLIFY 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F +  I L     A+  E  R  ++AVPRGQ+EAA A 
Sbjct: 85  SLQTWLTGLTDFMEWEYIEIDPFSAGVITLGFIYGAYFTETFRGAILAVPRGQLEAATAY 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V  PQ MR  +P + + ++ +LK ++L   +G ADLV         T Q 
Sbjct: 145 GLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQL 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++   IYL ++      + RL  + +   ++
Sbjct: 205 FYFLVLAALIYLLITSASNFVLRRLERRYSAGARE 239


>gi|167625395|ref|YP_001675689.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           halifaxensis HAW-EB4]
 gi|167355417|gb|ABZ78030.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella halifaxensis HAW-EB4]
          Length = 226

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 15/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      +     +  F+ ++G +L +  T L +   +   +     Y+S  +I G P +
Sbjct: 21  IYLILNGLKVTLIVTFFAMIIGSILGVATT-LMKMSSKWYLRWPANFYVS--VIRGTPVV 77

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y +            +  +    +  +  IA    + A+I+EI+R+G+ AV +G
Sbjct: 78  VQLVILYFI------------VLAALDVDKITAAVIAFGLNSGAYISEIIRAGIQAVDKG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL+     + V+LPQA+++I+P L ++++ LLK +++   +G  DL+  G  
Sbjct: 126 QMEAARSLGLSQAATMKEVILPQAIKNILPSLGNEFIVLLKETAVIGFIGGVDLMRAGEI 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I ++T +    +     IYL L+ +    ++R   ++   +
Sbjct: 186 IRSRTFEDSVPLFTCALIYLLLTYIFTFILSRFETRLKQSD 226



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  MI  +I+G      ++S+   + W    YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMIIGSILGVATTLMKMSSKWYLRWPANFYVSVIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VL+ 
Sbjct: 84  YFIVLAA 90


>gi|313891667|ref|ZP_07825274.1| putative glutamine ABC transporter, permease protein GlnP
           [Dialister microaerophilus UPII 345-E]
 gi|329122023|ref|ZP_08250632.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
 gi|313119945|gb|EFR43130.1| putative glutamine ABC transporter, permease protein GlnP
           [Dialister microaerophilus UPII 345-E]
 gi|327467075|gb|EGF12587.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Dialister micraerophilus DSM 19965]
          Length = 217

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 12/227 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      L      +  +A+IF+ + VL  +       L R       K L  +YI  ++
Sbjct: 1   MSYIQGILPQMISGLGVSAQIFIITLVL-SLPLGILLSLLRVSGVSVIKNLAGVYI--YI 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ I   Y   +  P++     +G S    +F S  IA     AA+ AEI R G
Sbjct: 58  MRGTPLMLQILFIY---YGLPLI-----LGNSFQMNDFSSAIIAFVANYAAYFAEIFRGG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ +GQ E A  LG  + +  R ++LPQ ++ ++PPL ++ + LLK++SL   +   D
Sbjct: 110 IQSIGKGQYEGAQVLGFNYSQTMRYIILPQVVKRVLPPLGNETITLLKDTSLVYILAMND 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L+ V  +I+ +        L+    YL  + ++   +  L  K A+ 
Sbjct: 170 LMRVTRSIVQRDFDT-TAFLVAGVFYLVCTFVLTKILTWLENKYAVY 215


>gi|312141964|ref|YP_004009300.1| abc transporter substrate binding lipoprotein [Rhodococcus equi
           103S]
 gi|311891303|emb|CBH50624.1| putative ABC transporter substrate binding lipoprotein [Rhodococcus
           equi 103S]
          Length = 598

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 68/294 (23%), Positives = 127/294 (43%), Gaps = 27/294 (9%)

Query: 118 RLSANKLVAWICRVYVEVFRNIP-PLVVIFFLYKSVLSVLPIPDHSIV----------LP 166
           RL ++ +   +   +    +  P P +  F    +  +    P  +              
Sbjct: 298 RLYSDWVPRELPAGWKPGSKAAPEPQLPDFAAIAAQNASTTEPSTAQPKSTLQQLGETFF 357

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                           +     + + S ++G  + +    ++     +  +    +Y   
Sbjct: 358 DWELYKRAFPDLLRTGLPNTLILALSSGIVGTAIGMLL-AVAGISRTRWLRWPARVYTDI 416

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   GLP +V+I L          LG    + G T S  +     ALS   AA+I EI R
Sbjct: 417 F--RGLPAVVIILLV--------GLGVGPVVKGLTGSNPYWLGAAALSLLAAAYIGEIFR 466

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQMEAA ALG ++R++  LV++PQ +R ++P L +Q+++L+K+SSL   +G 
Sbjct: 467 SGIQSVEPGQMEAARALGFSYRRSMALVVIPQGVRRVLPALMNQFISLIKDSSLIYFLGL 526

Query: 347 A----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +L +VG  +  QTG  +  ++     YL+L+I +   +N ++ ++    
Sbjct: 527 LVTQRELFAVGRDLNAQTGN-LSPLVAAGLFYLALTIPLTHLVNYIDRRLRTGR 579



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 16/217 (7%)

Query: 71  EIDQGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           ++ +    +     Y  A       G  NT  LA S  I  T IG L+    +S  + + 
Sbjct: 351 QLGETFFDWEL---YKRAFPDLLRTGLPNTLILALSSGIVGTAIGMLLAVAGISRTRWLR 407

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           W  RVY ++FR +P +V+I  +   V  V+     S     G    +   +     +  +
Sbjct: 408 WPARVYTDIFRGLPAVVIILLVGLGVGPVVKGLTGSNPYWLGAAALSLLAAAYIGEIFRS 467

Query: 187 AKIFVFSFVLGIVLSL-FATRLSRHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKY 242
               V    +    +L F+ R S           + LP L      +    +L+     Y
Sbjct: 468 GIQSVEPGQMEAARALGFSYRRSMALVVIPQGVRRVLPALMNQFISLIKDSSLI-----Y 522

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L         F            +S  +A   +  A
Sbjct: 523 FLGLLVTQRELFAVGRDLNAQTGNLSPLVAAGLFYLA 559


>gi|289671885|ref|ZP_06492775.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 306

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    +     L   V S+   P     +    F +   L     T+       +FS +L
Sbjct: 19  RWFGSIFAALVLLAIVHSLATNPRWEWGVFGQWFFSPSVLRGLAQTLLLTLLSTLFSIIL 78

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----G 252
           G  L+L     +R        AL   YI  F       +++I   +   +D  VL     
Sbjct: 79  GTALAL-----ARLSGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFT 133

Query: 253 QFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           Q  F   STV    +F    + LS   +A+ AEI+R GLI V  GQ EAA ALGL   + 
Sbjct: 134 QLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPVSRR 193

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              ++LPQA+RSI+P   ++ + L+K +S+   +   +L      I N+T   I ++++ 
Sbjct: 194 IFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVA 253

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++      +    A    +
Sbjct: 254 TVWYLIITTVLTSAQYYVERHFARGSAR 281



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 1/146 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-PLVVIFFL 148
           L G   T  L     + + I+GT +   RLS + L+A +   Y+  FR++P  LV+I   
Sbjct: 58  LRGLAQTLLLTLLSTLFSIILGTALALARLSGSPLLAALAWGYIWFFRSMPALLVLIILY 117

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
             + L    +             +   +            +   ++   I+        +
Sbjct: 118 NFAYLYDHIVLGVPFTQLVFAEWSTVDVLSQFTVAVLGLSLMQSAYTAEIIRGGLIGVDA 177

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPT 234
                     LP+      +I     
Sbjct: 178 GQHEAAAALGLPVSRRIFRIILPQAL 203


>gi|146319722|ref|YP_001199434.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|146321918|ref|YP_001201629.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|253752712|ref|YP_003025853.1| putative amino-acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|253754538|ref|YP_003027679.1| amino-acid ABC transporter permease protein [Streptococcus suis
           P1/7]
 gi|253756471|ref|YP_003029611.1| amino-acid ABC transporter permease protein [Streptococcus suis
           BM407]
 gi|145690528|gb|ABP91034.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|145692724|gb|ABP93229.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|251817001|emb|CAZ52650.1| putative amino-acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251818935|emb|CAZ56778.1| putative amino-acid ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251820784|emb|CAR47546.1| putative amino-acid ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|292559333|gb|ADE32334.1| Amino acid ABC transporter, permease protein [Streptococcus suis
           GZ1]
 gi|319759128|gb|ADV71070.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis JS14]
          Length = 219

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF  G+++++  T L +       K +   YI  +++ G P LV +   Y +
Sbjct: 23  VTIPLTILSFTFGLLIAI-GTALVQIAQIPILKQVARFYI--WVVRGTPLLVQL---YVI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L          V   F S  +  S  T A+ AE +R+ + +VP+GQ+EA  ++G
Sbjct: 77  FFGLPSL--------GIVLDAFPSAVLVFSVNTGAYAAETIRASIESVPKGQLEAGYSVG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R ++LPQA R   PPL++  + L+K++SLA  +   ++      I  +T +  
Sbjct: 129 MSFAQTMRRIILPQAFRVAFPPLSNTLIGLVKDTSLAANITVLEMFMATQQIAARTYEPF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +      +YL  S ++         K+A+ 
Sbjct: 189 ALYCEVALVYLFFSTILTKLQAYGEKKLAVY 219



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S++  ++ G + T  L         +I       +++   ++  + R Y+ V R  P L
Sbjct: 11  DSFSQILVPGLLVTIPLTILSFTFGLLIAIGTALVQIAQIPILKQVARFYIWVVRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V ++ ++  + S+  + D          +N
Sbjct: 71  VQLYVIFFGLPSLGIVLDAFPSAVLVFSVN 100


>gi|59801354|ref|YP_208066.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|194098395|ref|YP_002001453.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           NCCP11945]
 gi|239998800|ref|ZP_04718724.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           35/02]
 gi|240014284|ref|ZP_04721197.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           DGI18]
 gi|240016719|ref|ZP_04723259.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           FA6140]
 gi|240080912|ref|ZP_04725455.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           FA19]
 gi|240112729|ref|ZP_04727219.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           MS11]
 gi|240115477|ref|ZP_04729539.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           PID18]
 gi|240117771|ref|ZP_04731833.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           PID1]
 gi|240121847|ref|ZP_04734809.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           PID24-1]
 gi|240123327|ref|ZP_04736283.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           PID332]
 gi|240125576|ref|ZP_04738462.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|240128029|ref|ZP_04740690.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|254493586|ref|ZP_05106757.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae 1291]
 gi|260440713|ref|ZP_05794529.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           DGI2]
 gi|268594645|ref|ZP_06128812.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02]
 gi|268597029|ref|ZP_06131196.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19]
 gi|268598794|ref|ZP_06132961.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae MS11]
 gi|268601152|ref|ZP_06135319.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID18]
 gi|268603471|ref|ZP_06137638.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID1]
 gi|268681951|ref|ZP_06148813.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID332]
 gi|268684165|ref|ZP_06151027.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae SK-92-679]
 gi|268686419|ref|ZP_06153281.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae SK-93-1035]
 gi|291044023|ref|ZP_06569739.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|293399215|ref|ZP_06643380.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|59718249|gb|AAW89654.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|193933685|gb|ACF29509.1| Amino acid ABC transporter, permease protein [Neisseria gonorrhoeae
           NCCP11945]
 gi|226512626|gb|EEH61971.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae 1291]
 gi|268548034|gb|EEZ43452.1| amino acid ABC transporter [Neisseria gonorrhoeae 35/02]
 gi|268550817|gb|EEZ45836.1| amino acid ABC transporter [Neisseria gonorrhoeae FA19]
 gi|268582925|gb|EEZ47601.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae MS11]
 gi|268585283|gb|EEZ49959.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID18]
 gi|268587602|gb|EEZ52278.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID1]
 gi|268622235|gb|EEZ54635.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae PID332]
 gi|268624449|gb|EEZ56849.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae SK-92-679]
 gi|268626703|gb|EEZ59103.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria gonorrhoeae SK-93-1035]
 gi|291012486|gb|EFE04475.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|291610629|gb|EFF39739.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|317164090|gb|ADV07631.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 248

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + + LLY++ F   G P  V I +   + F   V             I         
Sbjct: 60  WALRKVSLLYVTLF--RGTPLFVQIVIWAYVWFPFFVHPSDGILVSGEAAIALRRGYGPL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALIANSGAYICEIFRAGIQSIDKGQMEAACSLGLTYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPLYTAALIYLLMTTFLGWIFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLEKRYNPQHR 248


>gi|83593588|ref|YP_427340.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83576502|gb|ABC23053.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 239

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 4/211 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+   +  +G+ +++  T L R       +A P  Y   F   G P L+ IAL Y 
Sbjct: 19  PVTLKLVTLAVAIGVFIAI-PTALLRVHPSPLVRAFP--YAFIFFFRGTPLLIQIALVYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P + +   +      P F    IA +  T A+ AEI+R  + A+PRG++EAA A 
Sbjct: 76  GLSTLPWIRENEVLWPILREP-FWCALIAFALNTGAYSAEILRGAIQAIPRGEVEAARAY 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      R ++LP+A +  +P   ++ + +LK S+LA ++   D+  V   +  +    
Sbjct: 135 GMRGLLIVRRIILPRAFQIGLPAYGNEIILILKGSALASSITLLDITGVARLLYARYYTP 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +E  +    IYL L  ++   +  +  +++ 
Sbjct: 195 VEAFVTAGVIYLILVYLLTRGLRLIERRLSR 225



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%), Gaps = 1/78 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    +     I       R+  + LV      ++  FR  P L+ I  +
Sbjct: 14  LFEGLPVTLKLVTLAVAIGVFIAIPTALLRVHPSPLVRAFPYAFIFFFRGTPLLIQIALV 73

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y   LS LP    + VL 
Sbjct: 74  YYG-LSTLPWIRENEVLW 90


>gi|209544208|ref|YP_002276437.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531885|gb|ACI51822.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 499

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +  +   AL  LY+   ++ G P L+ I   +               G       F++
Sbjct: 319 RRYGPRWLGALATLYVE--IVRGTPLLIQILFIFY-----------ALPGIGLRLSPFVA 365

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL    AA+ AE  R+GL +V RGQ+EAA+AL +TH +A R V++PQA+R +IP +T
Sbjct: 366 GVVALGMNYAAYEAENYRAGLQSVARGQVEAALALNMTHMQALRFVVVPQAVRMVIPVMT 425

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++LLK+SSL   +   +L      + +         L+    YL L +         
Sbjct: 426 NDFISLLKDSSLVSVITLTELSQTYVRLSSTYYDYFGTGLLIGTAYLLLGLPFVRLARMA 485

Query: 389 NAKIALKEKK 398
            A+    +++
Sbjct: 486 EARFQAGQRR 495



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 40/106 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+   +L G V T  ++   M+ A  +G  +   R    + +  +  +YVE+ R  P L+
Sbjct: 285 SFLPLLLHGAVLTLAVSACAMVVAVGLGLALALLRRYGPRWLGALATLYVEIVRGTPLLI 344

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            I F++ ++  +       +     + +N              +  
Sbjct: 345 QILFIFYALPGIGLRLSPFVAGVVALGMNYAAYEAENYRAGLQSVA 390


>gi|160936636|ref|ZP_02084003.1| hypothetical protein CLOBOL_01526 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440427|gb|EDP18172.1| hypothetical protein CLOBOL_01526 [Clostridium bolteae ATCC
           BAA-613]
          Length = 222

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 23/232 (9%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
                       LT+   A   V  F+LGIVL+L           K  K  PL++   F 
Sbjct: 9   WQYWPFLYHGALLTLKITAICAVLGFLLGIVLALV----------KISKYKPLIWFGRFY 58

Query: 228 --LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +  G P LV + +   +HF  P L  F             S  +  +  +AA+++EI 
Sbjct: 59  TSIFRGTPLLVQLCI---VHFGLPQLLGFTLTTTQ-------SGILTFTLNSAAYVSEIF 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G++ V +GQ EA+++LG+ +    + +++PQA++ I+P L ++ + LLK SS+   +G
Sbjct: 109 RGGIMGVDKGQYEASMSLGIGYGDMMKDIIIPQAVKHILPSLVNEAIALLKESSILSYIG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L+     I   T +  E  L+   IY    ++++   +RL   +   ++
Sbjct: 169 AVELLRAADQITVLTFRFFEPYLVIAVIYYVFVMILSAVASRLERWVNRSDR 220



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 35/79 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +TS   Y   +  G + T  +     +   ++G ++   ++S  K + W  R Y  +F
Sbjct: 3   LDFTSVWQYWPFLYHGALLTLKITAICAVLGFLLGIVLALVKISKYKPLIWFGRFYTSIF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P LV +  ++  +  +
Sbjct: 63  RGTPLLVQLCIVHFGLPQL 81


>gi|293412639|ref|ZP_06655362.1| polar amino acid ABC transporter [Escherichia coli B354]
 gi|331674785|ref|ZP_08375544.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA280]
 gi|291469410|gb|EFF11901.1| polar amino acid ABC transporter [Escherichia coli B354]
 gi|331068224|gb|EGI39620.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA280]
          Length = 367

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|167748300|ref|ZP_02420427.1| hypothetical protein ANACAC_03044 [Anaerostipes caccae DSM 14662]
 gi|167652292|gb|EDR96421.1| hypothetical protein ANACAC_03044 [Anaerostipes caccae DSM 14662]
          Length = 226

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 115/236 (48%), Gaps = 18/236 (7%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL---L 222
            +  F++ +        +     + V + +LG+ L      L R   EK GK+  L    
Sbjct: 6   FYKAFISGKRYLMYLDGLKMTILVSVLAILLGVALGTVL-ALMRLTAEKKGKSTVLSKIA 64

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   +I G PT+  + + + +                      +   +     +AA+++
Sbjct: 65  YVYIDIIRGTPTVTQLMIMFFVIL--------------KGVDGLIVGTVTFGLNSAAYVS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G++AV +GQME   +LGL++ +  + ++LPQA+++I+P L ++++ L+K +++  
Sbjct: 111 EIIRAGILAVDQGQMEGGRSLGLSYGQTMKDIILPQAIKNILPALGNEFIVLIKETAILG 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V   DL      +I++T +A+  ++    IY  +  ++ L +N +  ++   +K+
Sbjct: 171 YVSIVDLSKAADFVISRTYEALTPLIGTAVIYYLIVKVLTLVLNAVERRLRQSDKR 226



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVY 132
            + S   Y    L G   T  ++   ++    +GT++   RL+A K     +++ I  VY
Sbjct: 9   AFISGKRYLMY-LDGLKMTILVSVLAILLGVALGTVLALMRLTAEKKGKSTVLSKIAYVY 67

Query: 133 VEVFRNIPPLVVIFFLYKSVLS 154
           +++ R  P +  +  ++  +L 
Sbjct: 68  IDIIRGTPTVTQLMIMFFVILK 89


>gi|21910697|ref|NP_664965.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28895613|ref|NP_801963.1| amino acid ABC transporter (permease protein) [Streptococcus
           pyogenes SSI-1]
 gi|21904900|gb|AAM79768.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28810862|dbj|BAC63796.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes SSI-1]
          Length = 228

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F             +T+  +  +  F  ++G++++L      +  H K    +  L
Sbjct: 1   MDLSFLPKYWAYFNYGVLVTIMISISVVFFGTLIGVLVTLI-----KRSHVKPLTWVVNL 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+      F  +         +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   +++  T   I  +L+  F YL ++ ++A  +  L   +A
Sbjct: 172 QTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMA 223



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++ S +   T+IG LV   + S  K + W+  +YV +FR  P +V 
Sbjct: 9   YWAYFNYGVLVTIMISISVVFFGTLIGVLVTLIKRSHVKPLTWVVNLYVWIFRGTPMVVQ 68

Query: 145 IFFLYKSV 152
           I   +  +
Sbjct: 69  IMIAFAWM 76


>gi|325677375|ref|ZP_08157040.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Rhodococcus equi ATCC 33707]
 gi|325551838|gb|EGD21535.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Rhodococcus equi ATCC 33707]
          Length = 598

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 68/294 (23%), Positives = 127/294 (43%), Gaps = 27/294 (9%)

Query: 118 RLSANKLVAWICRVYVEVFRNIP-PLVVIFFLYKSVLSVLPIPDHSIV----------LP 166
           RL ++ +   +   +    +  P P +  F    +  +    P  +              
Sbjct: 298 RLYSDWVPRELPAGWKPGSKAAPEPQLPDFAAIAAQNASTTEPSTAQPKSTLQQLGETFF 357

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                           +     + + S ++G  + +    ++     +  +    +Y   
Sbjct: 358 DWELYKRAFPDLLRTGLPNTLILALSSGIVGTAIGMLL-AVAGISRTRWLRWPARVYTDI 416

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   GLP +V+I L          LG    + G T S  +     ALS   AA+I EI R
Sbjct: 417 F--RGLPAVVIILLV--------GLGVGPVVKGLTGSNPYWLGAAALSLLAAAYIGEIFR 466

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQMEAA ALG ++R++  LV++PQ +R ++P L +Q+++L+K+SSL   +G 
Sbjct: 467 SGIQSVEPGQMEAARALGFSYRRSMALVVIPQGVRRVLPALMNQFISLIKDSSLIYFLGL 526

Query: 347 A----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +L +VG  +  QTG  +  ++     YL+L+I +   +N ++ ++    
Sbjct: 527 LVTQRELFAVGRDLNAQTGN-LSPLVAAGLFYLALTIPLTHLVNYIDRRLRTGR 579



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 16/217 (7%)

Query: 71  EIDQGIVPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
           ++ +    +     Y  A       G  NT  LA S  I  T IG L+    +S  + + 
Sbjct: 351 QLGETFFDWEL---YKRAFPDLLRTGLPNTLILALSSGIVGTAIGMLLAVAGISRTRWLR 407

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           W  RVY ++FR +P +V+I  +   V  V+     S     G    +   +     +  +
Sbjct: 408 WPARVYTDIFRGLPAVVIILLVGLGVGPVVKGLTGSNPYWLGAAALSLLAAAYIGEIFRS 467

Query: 187 AKIFVFSFVLGIVLSL-FATRLSRHFHEK---TGKALPLLYISTFLIFGLPTLVLIALKY 242
               V    +    +L F+ R S           + LP L      +    +L+     Y
Sbjct: 468 GIQSVEPGQMEAARALGFSYRRSMALVVIPQGVRRVLPALMNQFISLIKDSSLI-----Y 522

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L         F            +S  +A   +  A
Sbjct: 523 FLGLLVTQRELFAVGRDLNAQTGNLSPLVAAGLFYLA 559


>gi|229587874|ref|YP_002869993.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229359740|emb|CAY46589.1| putative amino acid ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 230

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 3/211 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+ + +  LG+VL L A  L++    K+ + +   Y  + ++ G+P L+ + L Y  
Sbjct: 18  MTVKLALTALCLGLVLGL-AGALAKTSAHKSLQWVGGAY--STIVRGVPELLWVLLIYFG 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             +        F         F +  IAL     A+  E++R  +IA+P+G  EA +ALG
Sbjct: 75  TINVVRELGEVFGIPDLSLSAFAAGVIALGLCYGAYATEVLRGAIIAIPKGHREAGLALG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +    +++PQ  R  +P L + ++ L+K+++L   +G  +++      +  T Q  
Sbjct: 135 LSKTRIFTRLIMPQMWRIALPGLGNLFMILMKDTALVTVIGLEEIMRHAQIAVTVTRQPF 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              L+  FIYL L+ +  + M+ L  + A  
Sbjct: 195 TFYLVAAFIYLGLTSLSMVGMHFLEQRAARG 225



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 37/83 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+  G + T  LA + +    ++G      + SA+K + W+   Y  + R +P L+ 
Sbjct: 8   FGPALAAGALMTVKLALTALCLGLVLGLAGALAKTSAHKSLQWVGGAYSTIVRGVPELLW 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  +Y   ++V+        +P 
Sbjct: 68  VLLIYFGTINVVRELGEVFGIPD 90


>gi|82777622|ref|YP_403971.1| arginine transporter permease subunit ArtQ [Shigella dysenteriae
           Sd197]
 gi|309785093|ref|ZP_07679726.1| arginine transport system permease protein artQ [Shigella
           dysenteriae 1617]
 gi|81241770|gb|ABB62480.1| arginine 3rd transport system permease protein [Shigella
           dysenteriae Sd197]
 gi|308927463|gb|EFP72937.1| arginine transport system permease protein artQ [Shigella
           dysenteriae 1617]
          Length = 238

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVVAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|89096759|ref|ZP_01169651.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease protein [Bacillus sp. NRRL B-14911]
 gi|89088774|gb|EAR67883.1| amino acid (glutamine) ABC transporter substrate binding
           protein/permease protein [Bacillus sp. NRRL B-14911]
          Length = 243

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 91/200 (45%), Gaps = 13/200 (6%)

Query: 194 FVLGIVLSLFAT-RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            + G+V ++ A  R  +    K    +  +YI  F   G P +V   + Y          
Sbjct: 40  LLAGVVRTIPAPERGPKKILLKVINFVLSVYIEFF--RGTPMIVQAMVIYYGS------- 90

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               +          +  I +S  T A++AEIVR G++++ +GQ EAA A+G+ H +   
Sbjct: 91  ---ALAFGVDINVLAAAIIVVSINTGAYMAEIVRGGIVSIDKGQFEAAQAIGMNHYQTMW 147

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQ +R+I+P   + ++  +K++S+   +  ++L  +  ++     +  E   +   
Sbjct: 148 NVVLPQVIRNILPATGNHFVINIKDTSVLNVISVSELYFMTKSVAGNNFRYFESFFVACV 207

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           IY  ++ ++   +     K+
Sbjct: 208 IYFVMTFIVTRILRYFERKL 227


>gi|295399080|ref|ZP_06809062.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110316|ref|YP_003988632.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|294978546|gb|EFG54142.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215417|gb|ADP74021.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 233

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 13/223 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             + F    +    KI +F+ +LG  L +    L +    K        Y S F   G P
Sbjct: 24  PSIPFILEGVIVTLKIVIFAVLLGFALGVVL-ALMKIGRIKVLAWFADAYTSVF--RGTP 80

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ + L Y   F  P L   +          F S  IA    +AA+++EI+R+G++A+ 
Sbjct: 81  LVLQLVLIY---FGIPQLTGVDI-------GPFPSAVIAFGLNSAAYVSEIIRAGILAID 130

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA+ALG+ ++   R ++LPQA+++I+P L ++++ L K S++   +G  D++   
Sbjct: 131 KGQREAALALGIPYKLMMRDIILPQALKNILPALMNEFITLTKESAVVTVIGAMDVMRRA 190

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +  Q  + IE +LI   IY  L +++ L    L  ++   +
Sbjct: 191 YIVGGQVYRYIEPLLIAGLIYYVLVMLLTLLGKALEGRLRKSD 233



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 3/84 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  +    ++    +G ++   ++   K++AW    Y  VFR  P ++ +  +
Sbjct: 29  ILEGVIVTLKIVIFAVLLGFALGVVLALMKIGRIKVLAWFADAYTSVFRGTPLVLQLVLI 88

Query: 149 YKSVLS---VLPIPDHSIVLPFGM 169
           Y  +     V   P  S V+ FG+
Sbjct: 89  YFGIPQLTGVDIGPFPSAVIAFGL 112


>gi|227529781|ref|ZP_03959830.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350265|gb|EEJ40556.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 486

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 17/218 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      +F+ + G++L +     ++  +           IS+ LI+    +
Sbjct: 286 LRGLWMTIELTVVGIIFAMIFGVILGVLGVVNNKFANG----------ISSTLIYIFRGI 335

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I L + ++   P     N IG     P F++  + L+    A+I  IV+ G  +V +G
Sbjct: 336 PMIVLAFFIYMGVP-----NVIGHKV--PLFLAGILTLTLDEGAYIGAIVKGGFESVSQG 388

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL + KA   V+ PQ  + ++P L +Q++  LK++S+  A+G  +L   G  
Sbjct: 389 QWEAARSLGLPYSKALIKVIAPQGFKLMVPSLVNQFIITLKDTSILSAIGVMELTQTGTV 448

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+Q  +   +  I   IY+ +  ++    N +  ++A
Sbjct: 449 IISQNMEGFRMWTIIAVIYIIIITLLTWLSNYVQKRMA 486



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 36/71 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L   G+I A I G ++G   +  NK    I    + +FR IP +V+ FF
Sbjct: 284 ALLRGLWMTIELTVVGIIFAMIFGVILGVLGVVNNKFANGISSTLIYIFRGIPMIVLAFF 343

Query: 148 LYKSVLSVLPI 158
           +Y  V +V+  
Sbjct: 344 IYMGVPNVIGH 354


>gi|261380100|ref|ZP_05984673.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria subflava NJ9703]
 gi|284797319|gb|EFC52666.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria subflava NJ9703]
          Length = 248

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + +   Y++ F   G P  V I +   + F   V             +         
Sbjct: 60  WVLRKISFWYVTLF--RGTPLFVQIVIWAYVWFPFFVHPADGVLISGEAAVDLRRSYGAL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALVANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +G A+L  V  TI  +     E +     IYL L+  +     
Sbjct: 178 LASEFITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSFLGWVFL 237

Query: 387 RLNAKIALKEK 397
           RL  +     +
Sbjct: 238 RLENRYNPHHR 248


>gi|323142729|ref|ZP_08077445.1| putative glutamine ABC transporter permease protein GlnM
           [Succinatimonas hippei YIT 12066]
 gi|322417480|gb|EFY08098.1| putative glutamine ABC transporter permease protein GlnM
           [Succinatimonas hippei YIT 12066]
          Length = 222

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 17/206 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F+F++G++L+L    LSR+   K      + Y     I G+P L+     +    
Sbjct: 27  VVSMFFAFIIGMILALMG--LSRYKGLK-----AIYYSYVAFIRGVPVLIFALFLF-FGV 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +  QFN I         ++  I LS   +AF+AEI R G++AV +GQ+EAA +LG  
Sbjct: 79  GGLLNIQFNPI---------VAGIITLSINASAFLAEIFRGGILAVDKGQIEAARSLGFG 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R ++LPQA+R ++PPL +Q+++ LK++S+   +   +L      II +  +  E+
Sbjct: 130 YFRTMRYIVLPQALRIMVPPLVNQFISTLKDTSILSVISVRELTMNSQIIIARNFRPFEV 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                FIY  + ++IA+    +  K+
Sbjct: 190 YSYAAFIYFLVILLIAIAAKYIEKKM 215



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +++G   T  +A   M  A IIG ++    LS  K +  I   YV   R +P L+   FL
Sbjct: 15  LMMGLGATLLIAVVSMFFAFIIGMILALMGLSRYKGLKAIYYSYVAFIRGVPVLIFALFL 74

Query: 149 YKSV 152
           +  V
Sbjct: 75  FFGV 78


>gi|307129013|ref|YP_003881029.1| putative transporter membrane protein [Dickeya dadantii 3937]
 gi|306526542|gb|ADM96472.1| predicted transporter subunit: membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 221

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   + +   S  +  +     + + SFVLG+++ +    L R +     K +   Y
Sbjct: 1   MPSWLQLMADSFWSLLSAGLTFTVPLAILSFVLGLMIGVLV-ALLRLYGPTPLKKICDFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  S    A+ +E
Sbjct: 60  V--WMIRGTPLLVQLFLIFY-----------GLPNAGITLDAFPAALIGFSLNVGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  +++VP+GQ  AA +LG++  +A R V++PQ++   +PPL + +++L+K++SLA  
Sbjct: 107 IVRGAILSVPKGQWNAAYSLGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I++ T + + + +    IYL  S +++    RL      
Sbjct: 167 ITVPEMFLAAQRIVSVTYEPLILYIEAALIYLLFSTVLSKLQTRLEKYYQR 217



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+ + +  G   T  LA    +   +IG LV   RL     +  IC  YV + R  P 
Sbjct: 9   ADSFWSLLSAGLTFTVPLAILSFVLGLMIGVLVALLRLYGPTPLKKICDFYVWMIRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + +     D       G  LN
Sbjct: 69  LVQLFLIFYGLPNAGITLDAFPAALIGFSLN 99


>gi|153010173|ref|YP_001371387.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562061|gb|ABS15558.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 219

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   SFVLGI  +L         +     A P+ +   +L  G P L+ + L Y  
Sbjct: 26  LTVSSAFLSFVLGIAFALVV------LYAPAILAYPVRFFM-WLFMGTPLLLQLFLIY-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  +      P   +  I LS + A + A+I+R+G++AV  GQME A ++G
Sbjct: 77  ---------FGLVQIGINIPALGAGIIGLSLHFAVYNADIIRAGIVAVDPGQMEGARSIG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +H +A R V++PQA+R+ IPP+ +  + LLK++SL   +G A+LV      I++T    
Sbjct: 128 FSHGQALRYVVIPQAIRNTIPPIGNNMIVLLKDTSLVSIIGIAELVHSAQLAISETFSPF 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E  +    IY  +++++   + R+  K+ +  
Sbjct: 188 EFYITVAAIYYVVNLVLEAGLRRIERKVEVTR 219


>gi|238927936|ref|ZP_04659696.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas flueggei ATCC 43531]
 gi|238884269|gb|EEQ47907.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas flueggei ATCC 43531]
          Length = 214

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 15/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      +           +IF  +  L + L LFA  L R  H +      +L I  ++
Sbjct: 1   MDKTLDTIRLMLEGSTITLEIFCVTLALALPLGLFA-ALGRLSHFRPLSR--MLEIYIWI 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ +   Y           F       + P+  +  +A     AA+ AEI R+G
Sbjct: 58  MRGTPLMLQLLFVY-----------FALPMVGILLPDIAAALLAFILNYAAYFAEIFRAG 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVPRGQ EAA  LG++     R ++LPQ +R  +PP++++ +NL+K++SL   +   D
Sbjct: 107 IQAVPRGQFEAARVLGMSAPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMND 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L+ V  TI+ +    +   LI    YL+++ ++     +L A     
Sbjct: 167 LLRVARTIVQREFD-MTPFLIAGIFYLTMTAVLTYGFKKLEAHYGRY 212



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 3/125 (2%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  +    +  A  +G     GRLS  + ++ +  +Y+ + R  P ++ + 
Sbjct: 9   RLMLEGSTITLEIFCVTLALALPLGLFAALGRLSHFRPLSRMLEIYIWIMRGTPLMLQLL 68

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVLSLF 203
           F+Y ++  V  +            LN              A     F  + VLG+   L 
Sbjct: 69  FVYFALPMVGILLPDIAAALLAFILNYAAYFAEIFRAGIQAVPRGQFEAARVLGMSAPLT 128

Query: 204 ATRLS 208
             R+ 
Sbjct: 129 MRRII 133


>gi|261366633|ref|ZP_05979516.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Subdoligranulum variabile DSM 15176]
 gi|282571452|gb|EFB76987.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Subdoligranulum variabile DSM 15176]
          Length = 274

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 16/228 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS-RHFHEKTGKALP-----LLYI 224
                L     T+        F  ++G  +    T    +       +AL      +L  
Sbjct: 15  YGFSYLRGAGTTLLLALVGTFFGCLIGFAIGALQTIPVDKQRDPAWKRALIRILHGVLRC 74

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L  G P +V     Y       +L  F    G      + + ++ +S  T A++AE 
Sbjct: 75  YVELFRGTPMIVQAVFIYYG-----LLQVFGIKMGM-----WTAGFLIVSINTGAYMAET 124

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR G++++  GQ E A+++G+TH +    V+LPQA+R+IIP + + ++  +K++S+   +
Sbjct: 125 VRGGIVSIDPGQTEGAMSIGMTHWQTMLHVILPQALRNIIPQIGNNFIINIKDTSVLSVI 184

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              DL  V  +++       E   I M IYL+++++ +  +      +
Sbjct: 185 SITDLFFVHKSVVGALYTYFESATIVMIIYLTMTLLASYLLRLWEKAL 232



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 13/98 (13%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-------------NKLVAWICRV 131
           Y  + L G   T  LA  G     +IG  +GA +                 +++  + R 
Sbjct: 15  YGFSYLRGAGTTLLLALVGTFFGCLIGFAIGALQTIPVDKQRDPAWKRALIRILHGVLRC 74

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           YVE+FR  P +V   F+Y  +L V  I        F +
Sbjct: 75  YVELFRGTPMIVQAVFIYYGLLQVFGIKMGMWTAGFLI 112


>gi|222106577|ref|YP_002547368.1| glutamine ABC transporter [Agrobacterium vitis S4]
 gi|221737756|gb|ACM38652.1| glutamine ABC transporter [Agrobacterium vitis S4]
          Length = 507

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 20/217 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V   V+G++L++     S        +    LY   F   GLP +V I L    
Sbjct: 35  LAFASTVIGVVIGMILAIMGISRS-----PWLRIPARLYTDIF--RGLPAIVTILLI--- 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +        I G +  P      +ALS    A+I EI RSG+ +V RGQ+EA  AL 
Sbjct: 85  --GQGFARIAREIWGPSPYPL---GILALSLIAGAYIGEIFRSGIQSVDRGQLEACRALS 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQT 360
           +++ +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      T
Sbjct: 140 MSYGQGMRLIIVPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVVT 199

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  +  +L+    YL +++ +   +N ++ ++ L +K
Sbjct: 200 GN-LSPLLLAGMFYLVITVPLTHLVNTIDTRLRLGKK 235



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I VG  NT  LAF+  +   +IG ++    +S +  +    R+Y ++FR +P +V I  +
Sbjct: 25  ITVGLKNTLILAFASTVIGVVIGMILAIMGISRSPWLRIPARLYTDIFRGLPAIVTILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            +    +          P G+ 
Sbjct: 85  GQGFARIAREIWGPSPYPLGIL 106


>gi|325168928|ref|YP_004280718.1| deoxyfructosyl-amino acid ABC-type membrane transporter
           [Agrobacterium sp. H13-3]
 gi|325064651|gb|ADY68340.1| deoxyfructosyl-amino acid ABC-type membrane transporter
           [Agrobacterium sp. H13-3]
          Length = 502

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 22/219 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V    +G++L++     S        +    LY   F   GLP +V I L  Q 
Sbjct: 35  LAATSTVLGVAIGMMLAIMGISRS-----PWLRIPARLYTDIF--RGLPAIVTILLIGQ- 86

Query: 245 HFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                    F  IG     P  +    +ALS    A+I EI RSG+ +V RGQMEA  AL
Sbjct: 87  --------GFARIGRELFGPSPYPLGILALSLIAGAYIGEIFRSGIQSVDRGQMEACRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQ 359
            +++ +  RL+++PQ +R ++P L +Q++  +K+SSL   +G      ++  VG      
Sbjct: 139 SMSYGQGMRLIVVPQGVRRVLPALVNQFIGNVKDSSLVYFLGLLASEREIFRVGQDQAVV 198

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           TG  +  +L+    YL +++ +   +N ++ ++ + +++
Sbjct: 199 TGN-LSPLLLAGVFYLVVTVPLTHVVNAIDNRLRVGKQR 236



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 35/82 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I VG  NT  LA +  +    IG ++    +S +  +    R+Y ++FR +P +V I  +
Sbjct: 25  ITVGLKNTLILAATSTVLGVAIGMMLAIMGISRSPWLRIPARLYTDIFRGLPAIVTILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            +    +          P G+ 
Sbjct: 85  GQGFARIGRELFGPSPYPLGIL 106


>gi|283954479|ref|ZP_06371999.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283794096|gb|EFC32845.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 250

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 18/252 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L  I   +         P         +   +  ++    T++ +    + + + G +  
Sbjct: 11  LRQILTSWGLYDENSISPFAVWKFLDALDNKDTFINGFVYTLEVSVLALLIATIFGTIGG 70

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           + A         K  +A   +Y+  F         L+   + L +  PVL          
Sbjct: 71  VMA-----TSRFKVIRAYTRIYVELFQNVP-----LVIQIFFLFYALPVL--------GI 112

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F    + +  Y  A+++E+VRSG++AVP+GQ EA+ + G T+ +    +++PQ +R
Sbjct: 113 RLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPKGQFEASASQGFTYIQQMYYIIVPQTIR 172

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP+T+Q +NL+KN+S+ + VG A+L+    +     G      +    +Y  +   +
Sbjct: 173 IILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAAVLYFIICYPL 232

Query: 382 ALFMNRLNAKIA 393
           A F      K+ 
Sbjct: 233 AYFAKAYENKLK 244



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 46/87 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
              + GFV T  ++   ++ ATI GT+ G    S  K++    R+YVE+F+N+P ++ IF
Sbjct: 42  DTFINGFVYTLEVSVLALLIATIFGTIGGVMATSRFKVIRAYTRIYVELFQNVPLVIQIF 101

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           FL+ ++  +    D   +   G+   +
Sbjct: 102 FLFYALPVLGIRLDIFTIGVLGVGAYH 128


>gi|331684911|ref|ZP_08385503.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli H299]
 gi|331078526|gb|EGI49732.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli H299]
          Length = 367

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|300870920|ref|YP_003785791.1| amino acid transport system permease [Brachyspira pilosicoli
           95/1000]
 gi|300688619|gb|ADK31290.1| amino acid transport system permease protein [Brachyspira
           pilosicoli 95/1000]
          Length = 237

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 19/231 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKAL------- 219
           +F+ N    +    +  +    +F+ ++GIVL +F    +LS  +  K  K         
Sbjct: 11  VFIANHRYMYMVKGLLFSIGTTLFATLIGIVLGIFIALMQLSHIYPLKNIKGFETFNPIS 70

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L +    LI G P +V + +   +           F+G    +P  +   IA    +AA
Sbjct: 71  KLAFGYVNLIRGTPAVVQLMIWANV----------VFVGALRNTPILIISAIAFGINSAA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AEI+R+G+  + +GQMEA+ ALGL +  + + +++PQA++ I+P L S+++ L+K +S
Sbjct: 121 YVAEIIRAGIEGLDKGQMEASRALGLNYGLSMKEIIIPQAIKKILPALVSEFITLIKETS 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +   +G  DL+     I +QT + +E ++    IYL L+ + A+FM ++  
Sbjct: 181 IVGFIGGVDLLRSANIITSQTYRGVEPLIAVGIIYLILTSIFAMFMRKVEK 231


>gi|209695420|ref|YP_002263349.1| arginine/ornithine periplasmic binding protein-dependent
           transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
 gi|208009372|emb|CAQ79645.1| arginine/ornithine periplasmic binding protein-dependent
           transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
          Length = 225

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 98/222 (44%), Gaps = 9/222 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   S ++G+ +++  T ++R+ +          YI  F   G P L
Sbjct: 10  LPVYLDGLWTTVWLVALSLIIGLCIAV-PTAIARNSNNPLIWVPAWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y        + QF  +  +          +A +  T A+ +EIVR  +  +P+G
Sbjct: 67  IQLYLIYY------GMDQFYPVKDTVWEHASFCALVAFALNTGAYTSEIVRGSINGLPQG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EIEAAKAYGMSQFQTYKRIILPSALRRALPAYSNEVIFMLHGSAIAGIVTLMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + ++     E  +     Y+ L+ +I     +L  ++    +
Sbjct: 181 VNSRYYAPFESYIAAGLFYMCLTFIIIFVFKQLETRMLRFMR 222



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    +I    I       R S N L+      Y+  FR  P L+ ++ 
Sbjct: 12  VYLDGLWTTVWLVALSLIIGLCIAVPTAIARNSNNPLIWVPAWAYIYFFRGTPLLIQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVL 165
           +Y  +    P+ D     
Sbjct: 72  IYYGMDQFYPVKDTVWEH 89


>gi|90962415|ref|YP_536331.1| glutamine transport system permease protein [Lactobacillus
           salivarius UCC118]
 gi|227891535|ref|ZP_04009340.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|301299246|ref|ZP_07205533.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90821609|gb|ABE00248.1| Glutamine transport system permease protein [Lactobacillus
           salivarius UCC118]
 gi|227866682|gb|EEJ74103.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|300215038|gb|ADJ79454.1| Glutamine transport system permease protein [Lactobacillus
           salivarius CECT 5713]
 gi|300853206|gb|EFK80803.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 212

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+  +     FS ++G + ++  T  S     K  + +  +YI  F    
Sbjct: 9   WQTFLTGFENTILCSVIALFFSLIIGSIFAILQTVPS-----KLVRTIANIYIEIF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV+  + Y       V+ QF           F +  I L+ YT+AFIAE VR+G+ A
Sbjct: 62  IPLLVITMVFYV------VVPQFF-----IKLSGFTAGTIGLTLYTSAFIAETVRAGIKA 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQME A A GLT+ +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 VGVGQMEGARANGLTYWQTMRYIILPQAFKLVIPPLGNQFINLIKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I + + + I   L+    YL L++ ++ +M  L  K+A
Sbjct: 171 QGDVIASASFETINTYLVVGVFYLILTLPLSYYMRYLEKKLA 212



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 41/108 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S      L GF NT   +   +  + IIG++    +   +KLV  I  +Y+E+FRNIP L
Sbjct: 6   SENWQTFLTGFENTILCSVIALFFSLIIGSIFAILQTVPSKLVRTIANIYIEIFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           V+    Y  V               G+ L        T+     A   
Sbjct: 66  VITMVFYVVVPQFFIKLSGFTAGTIGLTLYTSAFIAETVRAGIKAVGV 113


>gi|148253984|ref|YP_001238569.1| ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1]
 gi|146406157|gb|ABQ34663.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 598

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 11/265 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +  I  +   + SVL  P     +    F     L     T+   A   +  F+L
Sbjct: 39  RAIGTVFSIIIIAAVLNSVLGNPRWGWGVFAEWFFAEPILVGLGRTLLLTALGALSGFLL 98

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-----ALKYQLHFDKPVL 251
           G  L+L     +R         L   YI  F    L  L+LI      L  ++    P  
Sbjct: 99  GGALAL-----ARVSRSSLLAGLAWTYIWIFRSIPLIVLLLILNNLGYLYEKIWIGIPYT 153

Query: 252 GQFNFIGGST-VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               F   +T +   F +  + L+   AAF AEI+R G+++V  GQ EAA ALGL   + 
Sbjct: 154 SITFFSYSTTQLISPFAAAVLGLALNQAAFAAEIIRGGILSVDHGQYEAAAALGLPRSRQ 213

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           T  ++LPQAMRSI+P   +  + L K +S    +   +L      I ++  + I ++++ 
Sbjct: 214 TFRIILPQAMRSILPGAFNDIIGLAKGTSNVYILALPELFYTVQVIFHRNLEVIPLLMVA 273

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
              YL +  +++    ++    A  
Sbjct: 274 TVWYLIILTVLSALQFQVERHFARG 298



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 1/144 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-PLVVIFF 147
           ILVG   T  L   G +   ++G  +   R+S + L+A +   Y+ +FR+IP  ++++  
Sbjct: 77  ILVGLGRTLLLTALGALSGFLLGGALALARVSRSSLLAGLAWTYIWIFRSIPLIVLLLIL 136

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
                L                  +   L  P         +   +F   I+     +  
Sbjct: 137 NNLGYLYEKIWIGIPYTSITFFSYSTTQLISPFAAAVLGLALNQAAFAAEIIRGGILSVD 196

Query: 208 SRHFHEKTGKALPLLYISTFLIFG 231
              +       LP    +  +I  
Sbjct: 197 HGQYEAAAALGLPRSRQTFRIILP 220


>gi|296329884|ref|ZP_06872368.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676610|ref|YP_003868282.1| putative ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296152923|gb|EFG93788.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414854|gb|ADM39973.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 224

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 15/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F +      +    +T+       VF+ + G++L+L                L  LYI
Sbjct: 6   WEFMISAFPTLIQALPITLFMAIAAMVFAIIGGLILALITKN-----KIPVLHQLSKLYI 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+PTLV + L Y   +  P L         +      +  I LS   AA++AEI
Sbjct: 61  SFF--RGVPTLVQLFLIY---YGLPQL-----FPEMSKMTALTAAIIGLSLKNAAYLAEI 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L +V  GQ+EA +++G+T  +A R ++LPQA+R+ IP   + ++ LLK +SLA  +
Sbjct: 111 FRAALNSVDDGQLEACLSVGMTKLQAYRRIILPQAIRNAIPATGNTFIGLLKETSLAFTL 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  ++ + G    +   +  E  L    +Y  L+I+ ++  +     ++   +
Sbjct: 171 GVMEMFAQGKMYASGNLKYFETYLAVAIVYWVLTIIYSILQDMFERAMSKPYR 223



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++     T ++A + M+ A I G ++     +   ++  + ++Y+  FR +P LV +F +
Sbjct: 16  LIQALPITLFMAIAAMVFAIIGGLILALITKNKIPVLHQLSKLYISFFRGVPTLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  +  + P       L
Sbjct: 76  YYGLPQLFPEMSKMTAL 92


>gi|119964017|ref|YP_946818.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119950876|gb|ABM09787.1| putative amino acid ABC transporter, permease protein [Arthrobacter
           aurescens TC1]
          Length = 219

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 14/207 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + + SF  G+VL+L    L R         +   Y+S  +I G P LV + + +      
Sbjct: 24  LTLASFAFGLVLALVV-ALMRLSPNWLLSGIGRFYVS--VIRGTPLLVQLFVIF------ 74

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F           + S  IA S     + AEI+R+ +++VP+GQ EA   +G++  
Sbjct: 75  -----FGLPSIGIRLDPWPSAIIAFSLNVGGYAAEIIRAAILSVPKGQWEAGHTIGMSRP 129

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +A   ++LPQA R  +PPL++ +++L+K++SLA  +   +L      I   + + + + L
Sbjct: 130 QALVRIILPQAARVSVPPLSNTFISLVKDTSLASLILVTELFRNAQQIAAFSQEFMALYL 189

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
               +Y  + ++++   + +  ++   
Sbjct: 190 QAALVYWVICLVLSTAQSAVEKRLDRY 216



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SS+   I      T  L  +      ++  +V   RLS N L++ I R YV V R  P L
Sbjct: 8   SSFGPLITGAVTGTIPLTLASFAFGLVLALVVALMRLSPNWLLSGIGRFYVSVIRGTPLL 67

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S+    D          LN
Sbjct: 68  VQLFVIFFGLPSIGIRLDPWPSAIIAFSLN 97


>gi|313144070|ref|ZP_07806263.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129101|gb|EFR46718.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 246

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 18/236 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P         +   +  LS    T+  +    + + + G +  + A         K  K
Sbjct: 23  NPFALWKFADMLSHADEFLSGFGYTLSVSCLALLIALIFGTIGGVMA-----TSRFKILK 77

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A   +Y+  F     P ++ I   Y           F           F    + +  Y 
Sbjct: 78  AYTRIYVEIF--QNTPLVIQIFFLY-----------FALHPLGIHLDVFSVGVLGVGAYH 124

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+++E+VRSG+++VP+GQ EA+ + G T+ +  R ++LPQ ++ I+PPLT+Q +NL+KN
Sbjct: 125 GAYVSEVVRSGILSVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPLTNQMVNLIKN 184

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +S+ + V   +++ V  +    T       L    +Y  +   +A F      ++ 
Sbjct: 185 TSVLLIVAGGEIMYVADSYAGDTSNYAPAYLFTALLYFIVCYPLAYFAKFYEDRLK 240



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 46/90 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+A   L GF  T  ++   ++ A I GT+ G    S  K++    R+YVE+F+N P ++
Sbjct: 35  SHADEFLSGFGYTLSVSCLALLIALIFGTIGGVMATSRFKILKAYTRIYVEIFQNTPLVI 94

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            IFFLY ++  +    D   V   G+   +
Sbjct: 95  QIFFLYFALHPLGIHLDVFSVGVLGVGAYH 124


>gi|330446638|ref|ZP_08310290.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490829|dbj|GAA04787.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 229

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                    T   +   S ++G+V ++    + R+   K        YI  F   G P L
Sbjct: 10  WEIYLEGFYTTVWMVAVSLLIGLVCAIPIGVM-RNSDNKFIAFPAWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y        L Q   + G+     +    +A    TAA+ AEI+R  + ++P+G
Sbjct: 67  IQLYLIYY------GLSQVIEVQGTLWQEAWFCALVAFILNTAAYTAEIIRGSINSMPQG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +A R ++LP A+R  +P  +++ + ++  S++A  V   DL      
Sbjct: 121 EIEAAKAYGMSQLQAFRRIILPSALRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGAARI 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+ L+  I     +L A+ 
Sbjct: 181 VNSRYYAPFESFLFAGLCYMVLTFAIIWGFKKLEARY 217



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L GF  T W+    ++   +    +G  R S NK +A+    Y+  FR  P L+ +
Sbjct: 10  WEIYLEGFYTTVWMVAVSLLIGLVCAIPIGVMRNSDNKFIAFPAWAYIYFFRGTPLLIQL 69

Query: 146 FFLYKSVLSVLPIPDHSI 163
           + +Y  +  V+ +     
Sbjct: 70  YLIYYGLSQVIEVQGTLW 87


>gi|218704289|ref|YP_002411808.1| arginine permease ArtQ [Escherichia coli UMN026]
 gi|293404167|ref|ZP_06648161.1| arginine transporter permease subunit ArtQ [Escherichia coli
           FVEC1412]
 gi|300901229|ref|ZP_07119330.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|301020604|ref|ZP_07184681.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|331662274|ref|ZP_08363197.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA143]
 gi|218431386|emb|CAR12264.1| arginine transporter subunit ;membrane component of ABC superfamily
           [Escherichia coli UMN026]
 gi|291428753|gb|EFF01778.1| arginine transporter permease subunit ArtQ [Escherichia coli
           FVEC1412]
 gi|300355303|gb|EFJ71173.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300398622|gb|EFJ82160.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|331060696|gb|EGI32660.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA143]
          Length = 238

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 MGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|258647026|ref|ZP_05734495.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260404467|gb|EEW98014.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 215

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 14/228 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M    R L      +  +A+IF+F+ VL + L +    + R       +     YI  +L
Sbjct: 1   MDYIFRILPNMFSGLGVSAQIFIFTIVLSLPLGMLL-AMVRISKVGLFRQAAGAYI--YL 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ I   Y   +  P++             +F +  +A     AA+ AEI R G
Sbjct: 58  MRGTPLMLQIMFIY---YGLPLIFDLQI-------SDFPAAILAFVANYAAYFAEIFRGG 107

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ +GQ E A  LG T+++    ++LPQ ++ +IPPL ++ + LLK++SL   +   D
Sbjct: 108 IQSISKGQYEGAKVLGFTYKQTMWHIILPQVVKRVIPPLGNETITLLKDTSLVYILAMND 167

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+ V    + +        L+    YL  + ++   +  +  + A+ E
Sbjct: 168 LMRVTRAFVQRDFDTTP-FLVAGVFYLVCTAVLTKILTYVENRYAVYE 214



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 2/189 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   +  +    ++ +  +G L+   R+S   L       Y+ + R  P ++ I F+
Sbjct: 11  MFSGLGVSAQIFIFTIVLSLPLGMLLAMVRISKVGLFRQAAGAYIYLMRGTPLMLQIMFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  +  +  +           F+ N    F  +       I    +    VL     +  
Sbjct: 71  YYGLPLIFDLQISDFPAAILAFVANYAAYFAEIFRGGIQSISKGQYEGAKVLGFTYKQTM 130

Query: 209 RHFHEK--TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            H        + +P L   T  +    +LV I     L        Q +F     +    
Sbjct: 131 WHIILPQVVKRVIPPLGNETITLLKDTSLVYILAMNDLMRVTRAFVQRDFDTTPFLVAGV 190

Query: 267 MSLYIALSC 275
             L      
Sbjct: 191 FYLVCTAVL 199


>gi|257869446|ref|ZP_05649099.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257803610|gb|EEV32432.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 215

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 117/232 (50%), Gaps = 18/232 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +L       ++  S    T+ ++     FS V+G ++++F     +    +  K +   Y
Sbjct: 1   MLELFQTYGDQFFSGFKYTIFSSLLALFFSLVIGTLMAIF-----QLSTNRWVKGIAKAY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F    L  +V+       +   P+               F +  I L+ YT+AFIAE
Sbjct: 56  VEFFRNIPLLIIVMFF-----YVVVPMYW--------VTFDGFQAGTIGLTIYTSAFIAE 102

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +RSG+  VP+GQMEA+++ G T+ +A R ++LPQA + ++PPL +Q++NL+KNSS+   
Sbjct: 103 TIRSGIQTVPKGQMEASLSSGFTYSQAMRYIILPQAFKIVVPPLGNQFINLVKNSSILAM 162

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           V   D++  G  I ++T    +  +I    YL +++ ++  M  L  + A++
Sbjct: 163 VAGLDIMYQGDLIASETFNTFDTYIIVGIFYLIITLPLSYLMVYLERRWAVR 214



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 42/94 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      GF  T + +   +  + +IGTL+   +LS N+ V  I + YVE FRNIP L
Sbjct: 6   QTYGDQFFSGFKYTIFSSLLALFFSLVIGTLMAIFQLSTNRWVKGIAKAYVEFFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +++ F Y  V       D       G+ +     
Sbjct: 66  IIVMFFYVVVPMYWVTFDGFQAGTIGLTIYTSAF 99


>gi|24379047|ref|NP_721002.1| putative glutamine ABC transporter, permease component
           [Streptococcus mutans UA159]
 gi|290580934|ref|YP_003485326.1| putative glutamine ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24376943|gb|AAN58308.1|AE014901_8 putative glutamine ABC transporter, permease component
           [Streptococcus mutans UA159]
 gi|254997833|dbj|BAH88434.1| putative glutamine ABC transporter permease component
           [Streptococcus mutans NN2025]
          Length = 228

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 116/235 (49%), Gaps = 10/235 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +T+  +A +  F  ++G++++L      +    K    L   
Sbjct: 1   MDFSFLSKYWAYFNYGVLVTIMISACVVFFGTIIGVLVALI-----KRSRIKVLDWLVSF 55

Query: 223 YISTFLIFGLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + + L HF    + +F  +         +   I LS  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMISFVLLHFTNMPIVKFGVLDLD--FSRLLPGIIVLSLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+VR+G+ AVP+GQ+EAA +LG+    A R V+LPQA ++I+P L ++++ ++K+SSL 
Sbjct: 112 SEVVRAGIEAVPKGQLEAAYSLGIKPVNAMRYVILPQAFKNILPALGNEFITIIKDSSLL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G  +L +   +++  T   +  +L   F YL ++ +++  +  L  +    +
Sbjct: 172 QTIGVMELWNGAQSVVTATYLPLTPLLFGAFYYLMVTTLMSALVKLLENRFGKGD 226



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 34/73 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  S Y      G + T  ++   +   TIIG LV   + S  K++ W+   YV +F
Sbjct: 1   MDFSFLSKYWAYFNYGVLVTIMISACVVFFGTIIGVLVALIKRSRIKVLDWLVSFYVWIF 60

Query: 137 RNIPPLVVIFFLY 149
           R  P +V I   +
Sbjct: 61  RGTPMVVQIMISF 73


>gi|28377715|ref|NP_784607.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|308179877|ref|YP_003924005.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270548|emb|CAD63452.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|308045368|gb|ADN97911.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 213

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
              +  +     T+ ++    VFS ++G + ++F    SR     T + +  +YI  F  
Sbjct: 7   HYWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSR-----TMRIIGRVYIEIF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P LV+    Y +                     F +  I L+ YT++FIAE VR+G+
Sbjct: 60  RNIPLLVIAMFFYVI-----------IPMYVAKIDGFTAGTIGLTIYTSSFIAETVRAGI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQME A A G+T+ +A   ++LPQA + IIPPL +Q++NL+KNSS+   V   DL
Sbjct: 109 QSVDPGQMEGARANGMTYWQAMSKIVLPQAFKIIIPPLGNQFINLVKNSSVLAFVAGFDL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    +I + +   I   ++    YL +++ ++ +M  L  K+A
Sbjct: 169 MYQANSIASLSLDTINSYVVVGVFYLIITLPLSYYMRHLEKKLA 212



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 43/92 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + ++ G   T   +   ++ +TIIGT+     +  ++ +  I RVY+E+FRNIP LV+
Sbjct: 8   YWSELIQGLGYTLLSSVIALVFSTIIGTMFAIFEVLPSRTMRIIGRVYIEIFRNIPLLVI 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
             F Y  +   +   D       G+ +     
Sbjct: 68  AMFFYVIIPMYVAKIDGFTAGTIGLTIYTSSF 99


>gi|77465748|ref|YP_355251.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|77390166|gb|ABA81350.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 219

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L++    +  +     YI    I G P L+ I + Y   F  P L           
Sbjct: 39  LLAALAQRSELRLVRGAAAFYIWF--IRGTPALIQIFIIY---FGLPQL--------GLR 85

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  IAL   + A++AEIVRSGL A+ RGQ E+A+ALG +  +  R ++LPQ  R 
Sbjct: 86  LSPFTAGVIALGINSGAYVAEIVRSGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRI 145

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+P +T++ ++ LKN+SL   +   +L     T+I+ T +  +  +    IYL L+ ++ 
Sbjct: 146 ILPSITNEAISTLKNTSLLSTITVVELTLYAQTLISATFRPFDFYIAVAVIYLVLTTVLT 205

Query: 383 LFMNRLNAKIAL 394
              N    + A 
Sbjct: 206 QIANWAERRYAR 217


>gi|323495727|ref|ZP_08100797.1| ABC transporter ATP-binding/permease protein [Vibrio sinaloensis
           DSM 21326]
 gi|323319194|gb|EGA72135.1| ABC transporter ATP-binding/permease protein [Vibrio sinaloensis
           DSM 21326]
          Length = 265

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+      G +     +    +T+  +     F+  +G+  +L      
Sbjct: 34  MGYQWQWERVPDYIAFYEDGEWWPAELVEGLFVTIKISVISLAFTLAIGLTTALL----- 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +  +   G+A+   YI   LI   P LV I L Y +             G       F +
Sbjct: 89  KLSNSIIGRAIANTYIE--LIRNTPLLVQIYLLYFVF------------GPVIGLDRFST 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AEI R GL ++ +GQ EAA +LGL        V+LPQ ++  +PPLT
Sbjct: 135 AVLALSLFQGAYTAEIFRGGLNSIDKGQFEAAKSLGLNRFFTYYDVILPQLIQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+ +T    EI      IYL +++ ++     L
Sbjct: 195 NEVVSLVKNSSIVSVMAIFDLTTEGRNIVAETAMPFEIWFTVAAIYLLVTLSLSALSALL 254

Query: 389 NAKIALKEK 397
             ++    +
Sbjct: 255 EHRLGASWR 263



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 13/123 (10%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           ++   +L V   W        ++    ++G  +  ER         + +  D  +  A L
Sbjct: 13  LLQITILGVGLWWL-------LDSGAKTMGYQWQWER-----VPDYIAFYEDGEWWPAEL 60

Query: 91  V-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           V G   T  ++   +     IG      +LS + +   I   Y+E+ RN P LV I+ LY
Sbjct: 61  VEGLFVTIKISVISLAFTLAIGLTTALLKLSNSIIGRAIANTYIELIRNTPLLVQIYLLY 120

Query: 150 KSV 152
              
Sbjct: 121 FVF 123


>gi|255323270|ref|ZP_05364405.1| L-cystine transport system permease protein TcyB [Campylobacter
           showae RM3277]
 gi|255299793|gb|EET79075.1| L-cystine transport system permease protein TcyB [Campylobacter
           showae RM3277]
          Length = 224

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 105/214 (49%), Gaps = 14/214 (6%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
            +     +   SF LG+++++  T ++R  + K  K L   YI  F   G P LV + + 
Sbjct: 24  MIKVTLPLTAISFSLGLLIAIL-TAIARIANIKILKQLSEFYIWIF--RGTPLLVQLFIV 80

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y   F  P++              + +  I  S    A+ +E VR+ +++VP+GQ EAA 
Sbjct: 81  Y---FGLPIV--------GVTLDVWSAAIITFSLNIGAYASEAVRAAVLSVPKGQWEAAT 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALG+++ +  R ++ PQA R  +PPL++ +++ LK++SLA ++   D+  V   I  +T 
Sbjct: 130 ALGMSYTQILRRIIAPQAARISLPPLSNIFISTLKDTSLAASITMVDMFMVAQRIAARTF 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + + ++    YL +   +     +L  + +  
Sbjct: 190 DPLTLYVLAALFYLIVCTFLTFLQAKLEKRFSRY 223



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L         +I  L    R++  K++  +   Y+ +FR  P LV +F +Y  +  V
Sbjct: 28  TLPLTAISFSLGLLIAILTAIARIANIKILKQLSEFYIWIFRGTPLLVQLFIVYFGLPIV 87

Query: 156 LPIPDHSIVLPFGMFLN 172
               D          LN
Sbjct: 88  GVTLDVWSAAIITFSLN 104


>gi|311071035|ref|YP_003975958.1| putative ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310871552|gb|ADP35027.1| putative ABC transporter permease [Bacillus atrophaeus 1942]
          Length = 224

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 15/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F +      +    +T+       +F+ + G+VL+L         H      L  +YI
Sbjct: 6   WGFMISAFPTLVGALPITLFMAVAAMIFAVIGGLVLALITKN-----HIPVLHQLSKVYI 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+PTLV + L Y   +  P L         +      +  I LS   AA++AEI
Sbjct: 61  SFF--RGVPTLVQLFLIY---YGLPQL-----FPEMSKMTALTAAIIGLSLKNAAYLAEI 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L +V  GQ+EA +++G+T  +A R ++LPQA+R+ IP   + ++ LLK +SLA  +
Sbjct: 111 FRAALNSVDEGQLEACLSVGMTKLQAYRRIILPQAVRNAIPATGNTFIGLLKETSLAFTL 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  ++ + G    +   +  E  L    +Y  L+I+ ++  +     I+   +
Sbjct: 171 GVMEMFAQGKMYASGNLKYFETYLAVAVVYWILTIIYSVLQDLFERAISKPYR 223



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++     T ++A + MI A I G ++     +   ++  + +VY+  FR +P LV +F +
Sbjct: 16  LVGALPITLFMAVAAMIFAVIGGLVLALITKNHIPVLHQLSKVYISFFRGVPTLVQLFLI 75

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  +  + P       L
Sbjct: 76  YYGLPQLFPEMSKMTAL 92


>gi|281180312|dbj|BAI56642.1| amino acid ABC transporter permease component [Escherichia coli
           SE15]
          Length = 368

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|91780749|ref|YP_555956.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693409|gb|ABE36606.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 218

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 9/226 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGL 232
                    +    +  V S V+ +   L +T L   +        PL+      +I  +
Sbjct: 1   MHWHDIVDFVPILIQGAVMSIVITLGCLLLSTVLGLTWALLKMSRYPLVVRGVSTMINVV 60

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L +I L + ++F  P +                +  I L    + ++AEI R+G+ AV
Sbjct: 61  RGLPMIVLLFYIYFVLPEIH--------IQVSALQASIIGLGFGYSTYVAEIFRAGIEAV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA ++G+   K    V+LPQA++  +PP ++  + +LK+SSLA  +  A++   
Sbjct: 113 DPGQYEAAQSIGMGRVKTMVRVILPQAIKVALPPYSNTLVMMLKDSSLASTITVAEMTRE 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  I   T Q + +  +    YL++S+ +      L  +    + +
Sbjct: 173 GQLIAASTFQNLTVYTLVAIGYLAMSLPLMSMTRTLERRFGRHKAR 218


>gi|311103256|ref|YP_003976109.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 3 [Achromobacter
           xylosoxidans A8]
 gi|310757945|gb|ADP13394.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 3
           [Achromobacter xylosoxidans A8]
          Length = 257

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 8/215 (3%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      +VFS +LG VL +  T  SR  +        L      +   +P LV + L
Sbjct: 40  WTLALALTAWVFSLLLGSVLGVMRTASSRLMN-------ALGATYVEVFRNIPLLVQMFL 92

Query: 241 KYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            Y  L    P               +F+   + L  Y +A +AE +R+G+ ++PRGQ +A
Sbjct: 93  WYFVLPELLPHAWGLAMKQMPQPWGQFVPAVLCLGFYGSARVAEQLRAGIQSLPRGQFQA 152

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             ALGLT  +  R V+LP+A R ++PPLTS+++  +K SS+A+ +G  +L     ++   
Sbjct: 153 GTALGLTEAQVYRYVILPEAFRIVLPPLTSEFMGTIKYSSVALTIGLLELTGQARSMAEF 212

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +    E       IYL ++ ++ L M  L   +A+
Sbjct: 213 SFHIFEAFSAATVIYLIINGIVVLGMRMLERHVAV 247



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 44/77 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   I +G   T  LA +  + + ++G+++G  R ++++L+  +   YVEVFRNIP LV
Sbjct: 29  TFLQTIFIGVGWTLALALTAWVFSLLLGSVLGVMRTASSRLMNALGATYVEVFRNIPLLV 88

Query: 144 VIFFLYKSVLSVLPIPD 160
            +F  Y  +  +LP   
Sbjct: 89  QMFLWYFVLPELLPHAW 105


>gi|110643516|ref|YP_671246.1| amino acid ABC transporter permease [Escherichia coli 536]
 gi|191173841|ref|ZP_03035362.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli F11]
 gi|218702042|ref|YP_002409671.1| amino-acid ABC transporter membrane protein [Escherichia coli
           IAI39]
 gi|110345108|gb|ABG71345.1| hypothetical amino-acid ABC transporter permease protein YhdY
           [Escherichia coli 536]
 gi|190905891|gb|EDV65509.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli F11]
 gi|218372028|emb|CAR19886.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|323966448|gb|EGB61882.1| inner membrane transport system [Escherichia coli M863]
 gi|327251364|gb|EGE63053.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli STEC_7v]
          Length = 367

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|261365769|ref|ZP_05978652.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria mucosa ATCC 25996]
 gi|288565672|gb|EFC87232.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Neisseria mucosa ATCC 25996]
          Length = 248

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------DKPVLGQFNFIGGSTVSPEF 266
              + + LLY++ F   G P  V I +   + F       D  ++     +         
Sbjct: 60  WVLRKVSLLYVTLF--RGTPLFVQIVIWSYVWFPFFVHPTDGVLINGDQAVEIRRSYGAL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ RGQMEAA +LGL++ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALIANSGAYICEIFRAGIQSIDRGQMEAARSLGLSYPQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +  A+L  V  TI  +     E +     IYL ++  +     
Sbjct: 178 LASEFITLLKDSSLLSVIAVAELAYVQSTISGRYSVYEEPLYTVALIYLMMTTFLGWVFL 237

Query: 387 RLNAKIALKEK 397
           RL  +   + +
Sbjct: 238 RLENRYNPQHR 248


>gi|156934695|ref|YP_001438611.1| glutamine ABC transporter permease protein [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156532949|gb|ABU77775.1| hypothetical protein ESA_02530 [Cronobacter sakazakii ATCC BAA-894]
          Length = 219

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V   V G+++ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLLEGAKMTLWISVLGLVGGLIIGLVAG-FARSFGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSKRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMKI 218


>gi|313904157|ref|ZP_07837536.1| polar amino acid ABC transporter, inner membrane subunit
           [Eubacterium cellulosolvens 6]
 gi|313470959|gb|EFR66282.1| polar amino acid ABC transporter, inner membrane subunit
           [Eubacterium cellulosolvens 6]
          Length = 238

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 108/229 (47%), Gaps = 20/229 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL------ 219
               F+ N         + ++  I + +  LG+VL +    +  +  ++ G A       
Sbjct: 12  FEMSFITNNRWLLYLKGLGSSLVITLGALALGVVLGILVAVVRTNHDQRKGHASLGLKII 71

Query: 220 -PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             + ++ T +I G P +V + +               F+  S+ +  +M   ++L   + 
Sbjct: 72  NGICHVYTTVIRGTPMMVQLLI-------------MGFVIFSSSTHYYMIAILSLGINSG 118

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+++EI+R G++++  GQMEA  +LG+ +    + +++PQA+++I+P L ++ + L K++
Sbjct: 119 AYVSEIIRGGIMSIDPGQMEAGRSLGMGYATVMKDIIIPQAIKNILPALGNELITLFKDT 178

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           SL   +G  +L  V   I  +T   +   +    +YL + +++     +
Sbjct: 179 SLVSVIGMTELTKVARDIQARTYLPLMPYIGIAVMYLIVVMILTYLQGK 227


>gi|301067875|ref|YP_003789898.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|300440283|gb|ADK20049.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
          Length = 474

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 18/237 (7%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
              D        +  N   L                F+ V+GI++ L           + 
Sbjct: 253 KTQDSDRSFLGLLRENWGTLMGGLKETMIVTIVAIFFATVVGILVGLLG-----VLPNQF 307

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            + +   +I  F   GLP LVL    Y      P L         +  P F++  I L+ 
Sbjct: 308 ARGVATTFIYIF--RGLPLLVLALFIYT---GVPSLIG-------SKIPAFVAGIITLTL 355

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  L
Sbjct: 356 NEGAYTAAFVKGGIQAVDDGQMEAARSLGLPFGKAMRRVILPQGIKIMIPSFINQFIITL 415

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++S+   +G  +L   G  II +  +  +I  +   IYL +  ++    N +  ++
Sbjct: 416 KDTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQRRM 472



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 37/79 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +    +  AT++G LVG   +  N+    +   ++ +FR +P LV+ 
Sbjct: 269 WGTLMGGLKETMIVTIVAIFFATVVGILVGLLGVLPNQFARGVATTFIYIFRGLPLLVLA 328

Query: 146 FFLYKSVLSVLPIPDHSIV 164
            F+Y  V S++     + V
Sbjct: 329 LFIYTGVPSLIGSKIPAFV 347


>gi|260597266|ref|YP_003209837.1| arginine transporter permease subunit ArtQ [Cronobacter turicensis
           z3032]
 gi|260216443|emb|CBA29557.1| Arginine transport system permease protein artQ [Cronobacter
           turicensis z3032]
          Length = 238

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPT 234
               + V +  LG+VL++    L                   + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALGLGLVLAMLFAVLESAKWRPVAWLATALVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + +      +     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTIPLGFASIPVQVQIDNFDVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 HGQRESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIIAAAIYLVITLISQYILKRIDLRATRFERR 236


>gi|289577747|ref|YP_003476374.1| polar amino acid ABC transporter inner membrane subunit
           [Thermoanaerobacter italicus Ab9]
 gi|297544041|ref|YP_003676343.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|289527460|gb|ADD01812.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter italicus Ab9]
 gi|296841816|gb|ADH60332.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 220

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 14/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+   +  +G++L L    L +    K    +   Y+   +I G P LV + L Y  
Sbjct: 21  MTLKLTFLAVTIGVILGLIV-ALIKMSSIKPISFVGASYVE--IIRGTPLLVQLLLIYN- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L QF         P F++   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG
Sbjct: 77  -----GLMQFG-----IDIPAFIAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +TH  A R V++PQA+++I+P L ++++ +LK S++   +GFADL      I + T +  
Sbjct: 127 MTHTMAMRYVIIPQAIKNILPALGNEFIVMLKESAIVSVIGFADLTRQADIIQSVTYKYF 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +I   IY  ++ + +  +     ++   + +
Sbjct: 187 EPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR 220



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 36/78 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+   + G + T  L F  +    I+G +V   ++S+ K ++++   YVE+ R  P LV 
Sbjct: 11  YSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFVGASYVEIIRGTPLLVQ 70

Query: 145 IFFLYKSVLSVLPIPDHS 162
           +  +Y  ++         
Sbjct: 71  LLLIYNGLMQFGIDIPAF 88


>gi|300935047|ref|ZP_07150079.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300459710|gb|EFK23203.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 238

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTVLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLGITLLSQYILKRIDLRATRFERR 236


>gi|194433150|ref|ZP_03065432.1| arginine ABC transporter, permease protein ArtQ [Shigella
           dysenteriae 1012]
 gi|194418647|gb|EDX34734.1| arginine ABC transporter, permease protein ArtQ [Shigella
           dysenteriae 1012]
 gi|320177804|gb|EFW52790.1| Arginine ABC transporter, permease protein ArtQ [Shigella boydii
           ATCC 9905]
 gi|332091031|gb|EGI96121.1| arginine transport system permease protein artQ [Shigella
           dysenteriae 155-74]
          Length = 238

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 MGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|157376893|ref|YP_001475493.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sediminis HAW-EB3]
 gi|157319267|gb|ABV38365.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sediminis HAW-EB3]
          Length = 226

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 15/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      +     +  F+ ++G +L +  T L +   +   +     Y+   +I G P +
Sbjct: 21  IYLIINGLKVTLIVTFFAMIMGSILGVTTT-LMKMSSKWYLRWPANFYVG--IIRGTPVV 77

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y +            +  +    +  +  IA    + A+I+EI+R+G+ AV +G
Sbjct: 78  VQLVILYFI------------VLAAFDIDKITAAIIAFGLNSGAYISEIIRAGIQAVDKG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL+H    + V+LPQA+++I+P L ++++ LLK +++   +G  DL+  G  
Sbjct: 126 QMEAARSLGLSHGATMKEVILPQAIKNILPSLGNEFIVLLKETAVIGFIGGVDLMRAGEI 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I ++T +    +     IYL L+    L +++   ++   +
Sbjct: 186 IRSRTFEDSVPLFTCALIYLLLTYSFTLLLSKFETRLKQSD 226



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  + F  MI  +I+G      ++S+   + W    YV + R  P +V +  L
Sbjct: 24  IINGLKVTLIVTFFAMIMGSILGVTTTLMKMSSKWYLRWPANFYVGIIRGTPVVVQLVIL 83

Query: 149 YKSVLSVL 156
           Y  VL+  
Sbjct: 84  YFIVLAAF 91


>gi|290473509|ref|YP_003466378.1| putative amino acid ABC transporter membrane protein [Xenorhabdus
           bovienii SS-2004]
 gi|289172811|emb|CBJ79582.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Xenorhabdus bovienii SS-2004]
          Length = 250

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     + + +F LGI L  F   L R +  K   A+   Y+  +LI G P L
Sbjct: 29  WPMLYAGLTFTIPLTLITFALGISLG-FIVALIRLYGSKPLVAVVRFYV--WLIRGTPLL 85

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L +                       F S  I  +    A+ +E++R+ LI+VP+G
Sbjct: 86  VQLFLIFY-----------ALPSVGITLEAFTSAVIGFTLNVGAYTSEVIRAALISVPKG 134

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+ ++G++  ++ R ++LPQA R  IPPL++ +++L+K++SLA  +   ++      
Sbjct: 135 QWEASHSIGMSWWQSLRRIVLPQAARVSIPPLSNTFISLVKDTSLASVITVPEMFLAAQR 194

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I   T Q + +      +YL LS +++    RL  K + +
Sbjct: 195 IAAVTYQPLILYTEAAILYLLLSSVLSALQVRLEKKFSQQ 234



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +  G   T  L          +G +V   RL  +K +  + R YV + R  P L
Sbjct: 26  DSLWPMLYAGLTFTIPLTLITFALGISLGFIVALIRLYGSKPLVAVVRFYVWLIRGTPLL 85

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++ ++ SV    +       G  LN
Sbjct: 86  VQLFLIFYALPSVGITLEAFTSAVIGFTLN 115


>gi|218887770|ref|YP_002437091.1| binding-protein-dependent transporters inner membrane component
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758724|gb|ACL09623.1| binding-protein-dependent transport systems inner membrane
           component [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 357

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/275 (21%), Positives = 103/275 (37%), Gaps = 34/275 (12%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +   +    +  H      G ++         +T+       + +  +G  + L      
Sbjct: 86  WNWGVVWQFLLRHDTQGAAGGWVPGTLTQGLLVTLRLGLWSTLLALCIGTGMGLL----- 140

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS----- 263
           R       + +   Y+          LV I   +      P+L          V+     
Sbjct: 141 RASPRLFRRMVARTYVEGVRNLPPLVLVFIFHFFVSSQFAPLLAGLFAPVADGVAALLSP 200

Query: 264 ------------------------PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                                   P F+S  + L  Y  A+I EIVR+GL  V RGQ EA
Sbjct: 201 QLYLPVQDWLARASALLLAPPGQLPVFLSGVVVLGLYEGAYITEIVRAGLEGVERGQWEA 260

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           + + GLT R+  R V+LPQA R I+PPL  Q+++ +K+S++   +   +L   G  ++  
Sbjct: 261 SASTGLTRRQQLRHVILPQAFRLIVPPLAGQFISTIKDSAILSVISIRELTFQGMELMAA 320

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           T    EI L    +YL L+   +L    +  ++  
Sbjct: 321 TYLTFEIWLTVAALYLMLTFSCSLAARHVERRLRR 355



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 32/68 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L     + A  IGT +G  R S       + R YVE  RN+PPLV++F  
Sbjct: 112 LTQGLLVTLRLGLWSTLLALCIGTGMGLLRASPRLFRRMVARTYVEGVRNLPPLVLVFIF 171

Query: 149 YKSVLSVL 156
           +  V S  
Sbjct: 172 HFFVSSQF 179


>gi|167769494|ref|ZP_02441547.1| hypothetical protein ANACOL_00828 [Anaerotruncus colihominis DSM
           17241]
 gi|167668462|gb|EDS12592.1| hypothetical protein ANACOL_00828 [Anaerotruncus colihominis DSM
           17241]
          Length = 205

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 13/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ V S +   VL L +  L +  H +  K +   YI   ++ G+P +VL    Y    
Sbjct: 6   VKVTVISLIFATVLGLISC-LFQISHSRVLKFISQAYID--IMRGVPVMVLAFFIYFG-- 60

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                               ++  + LS    A+++EI RSG+ AV  GQMEAA +LGL 
Sbjct: 61  --------VTRALDVRMSAEIAGILTLSLNAGAYLSEIFRSGIQAVNIGQMEAARSLGLP 112

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A R V+LPQA+R +IP + +Q++  LK++S+  A+G  +L   G  II +  ++ EI
Sbjct: 113 YGRAMRKVILPQAVRIVIPSMVNQFIITLKDTSILYAIGMPELTQAGSLIIARNFRSFEI 172

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 +Y  +  +++     +  +++
Sbjct: 173 WATVAAMYFVIIFLLSRLSRMIERRLS 199



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 35/63 (55%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +    +I AT++G +    ++S ++++ +I + Y+++ R +P +V+ FF+Y  V
Sbjct: 2   LQGTVKVTVISLIFATVLGLISCLFQISHSRVLKFISQAYIDIMRGVPVMVLAFFIYFGV 61

Query: 153 LSV 155
              
Sbjct: 62  TRA 64


>gi|23098332|ref|NP_691798.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776558|dbj|BAC12833.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 230

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 14/229 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + L  + L F    +     I V    +G++  LF   L+R       +    +YIS 
Sbjct: 13  FDVELALQNLPFILEGLPYTIMIAVAGMAIGLIFGLFL-ALARDSKTILLRWPSRIYISF 71

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV + + Y           F             +  +     +AA+IAEI R
Sbjct: 72  --MRGTPMLVFLFIIY-----------FGLPYMGIELSAISAAILGFGLNSAAYIAEINR 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S L +V RGQ E+A AL +T+    R ++LPQA R  IPPLT+ +++++K +SL   +  
Sbjct: 119 SSLNSVDRGQWESAKALNMTYWHTLRKIILPQATRIAIPPLTNVFMDIVKATSLTAVITV 178

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L      +  +   A+ + ++   IY  + I+I +   RL  + ++ 
Sbjct: 179 PELFQKAQIVTGREFDAMTVYILVALIYWPICILIGMLQERLEKRYSVY 227



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +A +GM    I G  +   R S   L+ W  R+Y+   R  P LV +F +
Sbjct: 25  ILEGLPYTIMIAVAGMAIGLIFGLFLALARDSKTILLRWPSRIYISFMRGTPMLVFLFII 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +            G  LN
Sbjct: 85  YFGLPYMGIELSAISAAILGFGLN 108


>gi|170770015|ref|ZP_02904468.1| arginine ABC transporter, permease protein ArtQ [Escherichia
           albertii TW07627]
 gi|170121081|gb|EDS90012.1| arginine ABC transporter, permease protein ArtQ [Escherichia
           albertii TW07627]
          Length = 238

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMNIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|150375847|ref|YP_001312443.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Sinorhizobium
           medicae WSM419]
 gi|150030394|gb|ABR62510.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Sinorhizobium medicae WSM419]
          Length = 220

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 12/231 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
           M  +   +     T+    KI + +  LG V++     +         K +         
Sbjct: 1   MEWDWEFVRQIMPTLIEGLKITILATALGAVVAAVIGLVFAILRMTAPKPIARATSFIVE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV +   + +  D                P  ++  I L  +   + AE+ R+
Sbjct: 61  FIRGTPLLVQLYFIFYVLPDV-----------GIRLPALVAGVIGLGIHYGTYAAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VPRGQ EAA A  LT R+    V+LPQA+  +IP L +  + + K + L  A+   
Sbjct: 110 GIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L++   +I N   + IE + +    +L +S++  +F+  L  + +  E++
Sbjct: 170 ELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVVFLRWLEERYSRVEQR 220



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 36/90 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                ++ G   T      G + A +IG +    R++A K +A      VE  R  P LV
Sbjct: 10  QIMPTLIEGLKITILATALGAVVAAVIGLVFAILRMTAPKPIARATSFIVEFIRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            ++F++  +  V       +    G+ ++ 
Sbjct: 70  QLYFIFYVLPDVGIRLPALVAGVIGLGIHY 99


>gi|312970986|ref|ZP_07785165.1| arginine transport system permease protein artQ [Escherichia coli
           1827-70]
 gi|310336747|gb|EFQ01914.1| arginine transport system permease protein artQ [Escherichia coli
           1827-70]
 gi|323172171|gb|EFZ57809.1| arginine transport system permease protein artQ [Escherichia coli
           LT-68]
 gi|324116076|gb|EGC10000.1| inner membrane transport system [Escherichia coli E1167]
          Length = 226

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 1   MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 60

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 61  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 119

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 120 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 179

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 180 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 224


>gi|89899833|ref|YP_522304.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89344570|gb|ABD68773.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 214

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            ++   + +  +       + + + + G +L  F   L R       + L ++YI T  I
Sbjct: 1   MISGIQIQYLGVAALWTVGLTLMALIGGSILG-FCIALFRVSPNSVLRYLSVVYIQT--I 57

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LVL+ + Y           F F         F+++ +A S Y+AA++ EI R  +
Sbjct: 58  QGIPLLVLLFIAY-----------FGFSIAGFNPSPFVTVVVAFSLYSAAYLGEIWRGCI 106

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             VP+ Q EA+ +LG    +  RLV++PQA R   PP     + L+KN+SLA  VGF +L
Sbjct: 107 QTVPKPQWEASGSLGFNRYQQLRLVIIPQAFRIATPPTVGFLVQLVKNTSLASTVGFIEL 166

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T +   + L+    Y  L   ++L   +L   + +  +
Sbjct: 167 ARAGQILNNTTFKPFSVFLLVALFYFGLCFPLSLLSKKLERSLNVAHR 214



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 38/100 (38%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             + V  + T  L    +I  +I+G  +   R+S N ++ ++  VY++  + IP LV++F
Sbjct: 8   QYLGVAALWTVGLTLMALIGGSILGFCIALFRVSPNSVLRYLSVVYIQTIQGIPLLVLLF 67

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
             Y         P   + +     L +             
Sbjct: 68  IAYFGFSIAGFNPSPFVTVVVAFSLYSAAYLGEIWRGCIQ 107


>gi|222085817|ref|YP_002544347.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723265|gb|ACM26421.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 293

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 8/227 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            ++   LS   LT++  A   VF   LG VL++ A            KA+  +++  F  
Sbjct: 58  LVHPSILSGVLLTLELMAGAMVFGTALGCVLAVMA-----TSQNLVLKAMAAVFVWWF-- 110

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            G+P +V I   + +    P +G  +F I  + +    ++ ++AL  + AA ++EI+R G
Sbjct: 111 RGVPLIVQIFFWFNIALFIPQVGIGSFTISINDLVTPSLAGFLALGLHEAANMSEIIRGG 170

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L++V RGQ +AA ALGL   +  R V+LPQA R IIPP  +Q + +LK S++   +G  D
Sbjct: 171 LMSVDRGQRDAAAALGLRPVQRLRAVILPQAARLIIPPTGNQAIGMLKASAIVSVIGMQD 230

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L++    I  +    IE++ +    YL+++ + ++  + L   +  K
Sbjct: 231 LLTQAQAIYARNFLIIELLFVASIWYLTITSVASIGQHFLEQSLQPK 277



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L    M+  T +G ++     S N ++  +  V+V  FR +P +V IFF 
Sbjct: 63  ILSGVLLTLELMAGAMVFGTALGCVLAVMATSQNLVLKAMAAVFVWWFRGVPLIVQIFFW 122

Query: 149 YKSVL 153
           +   L
Sbjct: 123 FNIAL 127


>gi|329942893|ref|ZP_08291672.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Chlamydophila psittaci Cal10]
 gi|313848065|emb|CBY17063.1| ABC transporter, membrane permease [Chlamydophila psittaci RD1]
 gi|325507119|gb|ADZ18757.1| amino ABC transporter, permease protein [Chlamydophila psittaci
           6BC]
 gi|328815153|gb|EGF85142.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Chlamydophila psittaci Cal10]
 gi|328914734|gb|AEB55567.1| amino acid ABC transporter, permease protein [Chlamydophila
           psittaci 6BC]
          Length = 215

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 107/227 (47%), Gaps = 15/227 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L     T+  +    +    LG+++       SR+F  +  + L  LY+
Sbjct: 1   MEHWVATARVLLRGCGYTLFVSGISILCGSFLGLIIGTMT---SRYFPCRITRWLGNLYV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P  + I + Y   F  P + + +           M+  IALS  ++A++AE 
Sbjct: 58  T--VIRGTPLFIQILIFY---FGLPSIIRLD-------PTPLMAGLIALSINSSAYLAEN 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ A+  GQ E+A  LG    +    ++ PQ  ++I+P LT++++ L+K SS+ + V
Sbjct: 106 IRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFKNILPSLTNEFVALIKESSILMVV 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  +L  V   I+++    +E+  I   +YL ++ + +     L  +
Sbjct: 166 GVPELTKVSKDIVSRELNPMEMYSICAALYLLMTSLFSYVARLLEKR 212



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAG--RLSANKLVAWICRVYVEVFRNIPPLV 143
           A  +L G   T +++   ++  + +G ++G    R    ++  W+  +YV V R  P  +
Sbjct: 8   ARVLLRGCGYTLFVSGISILCGSFLGLIIGTMTSRYFPCRITRWLGNLYVTVIRGTPLFI 67

Query: 144 VIFFLYKSVLSVLP 157
            I   Y  + S++ 
Sbjct: 68  QILIFYFGLPSIIR 81


>gi|315037816|ref|YP_004031384.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL
           1112]
 gi|325956291|ref|YP_004286901.1| glutamine ABC transporter permease [Lactobacillus acidophilus 30SC]
 gi|312275949|gb|ADQ58589.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL
           1112]
 gi|325332856|gb|ADZ06764.1| glutamine ABC transporter permease [Lactobacillus acidophilus 30SC]
 gi|327183110|gb|AEA31557.1| glutamine ABC transporter permease [Lactobacillus amylovorus GRL
           1118]
          Length = 213

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+  +    +FS +LG+  +L      +    K G+ +  +YI+ F    
Sbjct: 9   WGAFLTGFWNTILCSIIALIFSLILGVFFALL-----KVAPPKFGRVIAKVYIAIF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ + Y +                     F +  I L+ YT+AFIAE VR+G+ +
Sbjct: 62  IPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 IGTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I   T Q I+  +I    YL L++ ++ +M  L  K+A
Sbjct: 171 QAQLIAFSTFQTIDTYIIVGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 42/105 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A L GF NT   +   +I + I+G      +++  K    I +VY+ +FRNIP LV++
Sbjct: 9   WGAFLTGFWNTILCSIIALIFSLILGVFFALLKVAPPKFGRVIAKVYIAIFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
              Y  V   +           G+ L        T+    N+   
Sbjct: 69  MIFYLIVPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINSIGT 113


>gi|313115214|ref|ZP_07800698.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622492|gb|EFQ05963.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 227

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 96/212 (45%), Gaps = 18/212 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+      F F+ ++ + ++L         +    + +   YI  ++I G P LV + +
Sbjct: 28  MTIPLTLVSFFFAMIIAVAVALVQYA-----NVPVLRQIARFYI--WVIRGTPLLVQLFI 80

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +                   +   F +  IA +    A+ AE +R  L +VP+GQ+EA 
Sbjct: 81  IFY-----------GLPSVGIMLDAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAG 129

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             +G++  +  R ++LPQA+R+ +P L++  + ++K++SLA  +  A+L   G  +  +T
Sbjct: 130 YCVGMSWWQIMRRIVLPQALRTAVPALSNSLIGMIKDTSLASNITVAELFMAGQRVAART 189

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              + I      +YL    +I      L  ++
Sbjct: 190 YIFLPIYCEVAVVYLLFCTVITKLQALLERRL 221



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 34/101 (33%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  G   T  L       A II   V   + +   ++  I R Y+ V R  P LV +F
Sbjct: 20  RILTAGLTMTIPLTLVSFFFAMIIAVAVALVQYANVPVLRQIARFYIWVIRGTPLLVQLF 79

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            ++  + SV  + D           N       T+     +
Sbjct: 80  IIFYGLPSVGIMLDAFPAAVIAFAFNEGAYCAETMRGALES 120


>gi|309807768|ref|ZP_07701702.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308169028|gb|EFO71112.1| ABC transporter, permease protein [Lactobacillus iners LactinV
           01V1-a]
          Length = 179

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             L R       K   + YI   LI G P +V I   Y           F          
Sbjct: 1   MALMRLSSHLALKIPAICYIE--LIRGTPQMVQILFVY-----------FGIGAIIQNMS 47

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
             ++  IA+   + A++AE +RSG+ ++P GQ EAA +LGL+     R V++PQA+++I 
Sbjct: 48  ALLAGIIAIGLNSGAYVAEDIRSGINSLPVGQAEAARSLGLSKAATYRYVVIPQAIKNIW 107

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L ++++ LLK+SSL   +G A+ +     +   T Q +  +++ M IY  ++  +   
Sbjct: 108 PALGNEFITLLKDSSLVSIIGVAETMYQTQLVQTSTYQGVFPLVVAMAIYFIMTFTLTRI 167

Query: 385 MNRLNAKI 392
           ++ +  ++
Sbjct: 168 LSYMERRM 175


>gi|325267568|ref|ZP_08134220.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Kingella denitrificans ATCC 33394]
 gi|324980918|gb|EGC16578.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Kingella denitrificans ATCC 33394]
          Length = 245

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 17/246 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG----KALPLLY- 223
           M +                K+   + + G VL LF   L+R    + G    + +  L  
Sbjct: 1   MQIIWEYRQMFLTGALMTLKLTTVAVLGGSVLGLFG-ALARIIRFEKGGVFLRGIAWLLR 59

Query: 224 ----ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-------FMSLYIA 272
               I   L  G P  V I + + +     V     +I     + E        ++  +A
Sbjct: 60  TLSLIYVTLFRGTPLFVQIFIWHFVWSVALVNPADGWILSGDAAAEVRRNYGPLVAGVLA 119

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+    A+I EI R+G+ ++ RGQMEAA +LGLT+ +A R V+LPQA+R ++PPL ++++
Sbjct: 120 LTVNAGAYITEIFRAGIQSIDRGQMEAARSLGLTYAQAMRYVILPQALRRMLPPLANEFI 179

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+K+SSL  A+  A+L  V  TI  +       +     IYL LS+ ++    RL  K 
Sbjct: 180 TLMKDSSLLSAIAVAELAYVQSTISGRYSIYEAPLYTVALIYLILSMGLSWIFARLEKKY 239

Query: 393 ALKEKK 398
               ++
Sbjct: 240 NTAHQR 245



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 51/165 (30%), Gaps = 13/165 (7%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----------KLVAWICRV 131
             Y    L G + T  L    ++  +++G      R+               L+  +  +
Sbjct: 5   WEYRQMFLTGALMTLKLTTVAVLGGSVLGLFGALARIIRFEKGGVFLRGIAWLLRTLSLI 64

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           YV +FR  P  V IF  +      L  P    +L        R    P +       +  
Sbjct: 65  YVTLFRGTPLFVQIFIWHFVWSVALVNPADGWILSGDAAAEVRRNYGPLVAGVLALTVNA 124

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
            +++  I  +   +        +  ++L L Y        LP  +
Sbjct: 125 GAYITEIFRAGIQS--IDRGQMEAARSLGLTYAQAMRYVILPQAL 167


>gi|28900674|ref|NP_800329.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365548|ref|ZP_05778085.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260877612|ref|ZP_05889967.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260895967|ref|ZP_05904463.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260901648|ref|ZP_05910043.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28809054|dbj|BAC62162.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308085232|gb|EFO34927.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090515|gb|EFO40210.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308108923|gb|EFO46463.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308114385|gb|EFO51925.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
          Length = 306

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 18/280 (6%)

Query: 123 KLVAWICRVY-VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++  IC +  V ++      V   + +K    +L  P     LP+              
Sbjct: 28  WVLLIICGICGVWLYHRSSVGVHYLWQWKEAFELLFTPRSDGGLPY-------FFQGLIS 80

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYISTFLIFGLPT 234
           T+  +     F+ VLG +L L     S          +       PL+++  F  F    
Sbjct: 81  TLRLSIWGISFALVLGTLLGLARFSRSVWLRTPANAFIQLVRNIPPLVFVFIFYFFISNQ 140

Query: 235 LVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L+ +     L   +  +P   Q    G S +     S  + +   ++A+IAE+VR+GL +
Sbjct: 141 LIPLLGLEDLLRNYNGEPNALQSFLFGPSNLWENLASGVLCVGLLSSAYIAEVVRAGLQS 200

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+   +   ++  
Sbjct: 201 IDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTF 260

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  + N +G   EI LI  F Y  +   ++L    +  K
Sbjct: 261 VGTEMANSSGYIFEIWLIVGFSYFLICFGLSLIFRYIEKK 300



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  L+  G+  A ++GTL+G  R S +  +      ++++ RNIPPL
Sbjct: 73  YFFQGLISTLRLSIWGISFALVLGTLLGLARFSRSVWLRTPANAFIQLVRNIPPL 127


>gi|170018487|ref|YP_001723441.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|194440026|ref|ZP_03072083.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 101-1]
 gi|253771899|ref|YP_003034730.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254163205|ref|YP_003046313.1| putative amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|169753415|gb|ACA76114.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|194421030|gb|EDX37060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 101-1]
 gi|242378804|emb|CAQ33596.1| yhdY, subunit of YhdW/YhdX/YhdY/YhdZ ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253322943|gb|ACT27545.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975106|gb|ACT40777.1| predicted amino-acid transporter subunit [Escherichia coli B str.
           REL606]
 gi|253979262|gb|ACT44932.1| predicted amino-acid transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|323941637|gb|EGB37816.1| inner membrane transport system [Escherichia coli E482]
 gi|323970315|gb|EGB65585.1| inner membrane transport system [Escherichia coli TA007]
          Length = 367

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 125 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|257469870|ref|ZP_05633962.1| amino acid ABC transporter permease [Fusobacterium ulcerans ATCC
           49185]
 gi|317064099|ref|ZP_07928584.1| amino acid transport system permease [Fusobacterium ulcerans ATCC
           49185]
 gi|313689775|gb|EFS26610.1| amino acid transport system permease [Fusobacterium ulcerans ATCC
           49185]
          Length = 236

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 15/230 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-----FATRLSRHFHEKTGKALPLLYIST 226
               ++    ++ T     +   +LGI ++L     F     +   EK      L +   
Sbjct: 17  YMYIVNGLAFSIGTTMLAALIGVLLGIFIALMELSHFYPLKHKKGWEKFNPLSSLAFAYV 76

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI G P +V + +   L F          +G    +P  +   ++    + A++AEI+R
Sbjct: 77  DLIRGTPAVVQLMILANLIF----------VGALRDTPILVIAGLSFGINSGAYVAEIIR 126

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  + +GQMEAA ALG+ +  A + +++PQA++ I+P L S+++ LLK +S+   +G 
Sbjct: 127 AGIEGLDKGQMEAARALGMPYGIAMKEIIIPQAIKKILPALVSEFITLLKETSIVGFIGG 186

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            DL+     I +QT + +E +L    IYL L+ +   FM  +   + + +
Sbjct: 187 VDLLRSANIITSQTYRGVEPLLAVGLIYLILTAVFTKFMRGIEKGLKVSD 236


>gi|146340447|ref|YP_001205495.1| amino acid ABC transporter membrane protein [Bradyrhizobium sp.
           ORS278]
 gi|146193253|emb|CAL77269.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Bradyrhizobium sp. ORS278]
          Length = 222

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 17/223 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            ++        TM       +   ++G+++ +      R         L + YI  F   
Sbjct: 13  YSHLFWVGLGWTMAYTLGTVLLGTIIGLLVGII-----RLRRPVVIDWLLIAYIELF--R 65

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P LV I      ++  PV+   N        P  ++    LS Y  AF AEI+R  + 
Sbjct: 66  CTPLLVQII---WFYYAFPVVIGINI-------PAHVAAVTVLSLYGGAFYAEIIRGSIE 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VPRGQ +AA ALGL   +  RLV+LPQA++ ++ P  +Q +  LKN+SL   +   DLV
Sbjct: 116 SVPRGQWDAARALGLRPWRMMRLVILPQALKPMLAPYVNQSVTQLKNTSLVSVIAVPDLV 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   T + +E+  I   IY ++     L   R    ++
Sbjct: 176 YNATLINADTYRPLEVYTIIAIIYFAILFPATLLGRRFERGMS 218



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 50/125 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+    VG   T       ++  TIIG LVG  RL    ++ W+   Y+E+FR  P LV 
Sbjct: 13  YSHLFWVGLGWTMAYTLGTVLLGTIIGLLVGIIRLRRPVVIDWLLIAYIELFRCTPLLVQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I + Y +   V+ I   + V    +     G  +  +   +   +    +     L L  
Sbjct: 73  IIWFYYAFPVVIGINIPAHVAAVTVLSLYGGAFYAEIIRGSIESVPRGQWDAARALGLRP 132

Query: 205 TRLSR 209
            R+ R
Sbjct: 133 WRMMR 137


>gi|194435100|ref|ZP_03067337.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella dysenteriae 1012]
 gi|194416662|gb|EDX32794.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella dysenteriae 1012]
 gi|320181544|gb|EFW56462.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella boydii ATCC 9905]
 gi|332087263|gb|EGI92396.1| general L-amino acid transport system permease protein aapM
           [Shigella boydii 5216-82]
          Length = 367

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|148545936|ref|YP_001266038.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148509994|gb|ABQ76854.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 273

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 17/282 (6%)

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           S+ K V       +  FR    L+    L+   ++     D    +    F N  G    
Sbjct: 6   SSPKPVVKPAGAGLFGFR-TRLLLTWLALFGLFVAFFLSFDLKFAIILEKFPNLAGFKLG 64

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                  A + +F  +  +V+S+   FA  L+R  +      +   Y S F    L    
Sbjct: 65  PNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLI-- 122

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 Q+      L Q   + G+       +  IALS    A+++EI R+G++ V RGQ
Sbjct: 123 ------QILLIYLGLPQVGLVPGAI-----SAGIIALSLNYGAYLSEIFRAGILGVARGQ 171

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA+ALG+   +    ++LPQAMR IIPP  +Q++++LK+SSL   +G  +++ +  + 
Sbjct: 172 REAALALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSY 231

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              + + +E++     IY  LSI++ L   RL        ++
Sbjct: 232 GRSSYRYLEMLTTAAVIYWVLSILLELLQARLERHFGKAYQR 273



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L    M+ + ++G      RLS + ++  +   Y   FR  P L+ I  +
Sbjct: 68  FLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLIQILLI 127

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  V  +P         + LN 
Sbjct: 128 YLGLPQVGLVPGAISAGIIALSLNY 152


>gi|256750907|ref|ZP_05491791.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256750242|gb|EEU63262.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 220

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+   +  +G++L L    L +    K    +   Y+   +I G P LV + L Y  
Sbjct: 21  MTLKLTFLAVTIGVILGLIV-ALIKMSSIKPISFIGASYVE--IIRGTPLLVQLLLIYN- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L QF         P F +   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG
Sbjct: 77  -----GLMQFG-----IDIPAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +TH  A R V++PQA+++I+P L ++++ +LK S++   +GFADL      I + T +  
Sbjct: 127 MTHTMAMRYVIIPQAIKNILPALGNEFIVMLKESAIISVIGFADLTRQADIIQSITYKYF 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +I   IY  ++ + +  +     ++   + +
Sbjct: 187 EPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR 220



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 39/86 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           V + S   Y+   + G + T  L F  +    I+G +V   ++S+ K +++I   YVE+ 
Sbjct: 3   VDFLSMVKYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVEII 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHS 162
           R  P LV +  +Y  ++         
Sbjct: 63  RGTPLLVQLLLIYNGLMQFGIDIPAF 88


>gi|167769529|ref|ZP_02441582.1| hypothetical protein ANACOL_00863 [Anaerotruncus colihominis DSM
           17241]
 gi|167668497|gb|EDS12627.1| hypothetical protein ANACOL_00863 [Anaerotruncus colihominis DSM
           17241]
          Length = 257

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 94/233 (40%), Gaps = 23/233 (9%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH---------FHEKTGKALPL 221
                 +   +T+  +    +   V+G+++    +  S+            ++    +  
Sbjct: 12  YWPMFWAGIKITLLVSLTGTIIGLVIGLIVGSARSISSKIEPRDSFATKIVKRIVNVIAC 71

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YI  F   G P +V     Y              +         ++    +S  T A++
Sbjct: 72  VYIEFF--RGTPMMVQAVFLYY------------GLKSVFNWTPVVAGICIISINTGAYM 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+RSG+ +V  GQ EAA ++G+T  +    V+LPQ +++  P + ++++  +K+SS+ 
Sbjct: 118 AEILRSGIQSVDVGQTEAARSIGMTSAQTMLHVVLPQGIKNAFPAIGNEFVVNIKDSSVL 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+   +L      I           L+   IYL L+      ++ +  ++  
Sbjct: 178 NAISVTELFFQSNKIAGSIFDFTATFLVTALIYLILTFTTTRILHVIEKRMGR 230



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 14/90 (15%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK--------------LVAWICR 130
           Y      G   T  ++ +G I   +IG +VG+ R  ++K              +V  I  
Sbjct: 12  YWPMFWAGIKITLLVSLTGTIIGLVIGLIVGSARSISSKIEPRDSFATKIVKRIVNVIAC 71

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
           VY+E FR  P +V   FLY  + SV     
Sbjct: 72  VYIEFFRGTPMMVQAVFLYYGLKSVFNWTP 101


>gi|15967029|ref|NP_387382.1| putative amino-acid transport system permease ABC transporter
           protein [Sinorhizobium meliloti 1021]
 gi|307302495|ref|ZP_07582252.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307316175|ref|ZP_07595619.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15076302|emb|CAC47855.1| Putative amino-acid transport system permease ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306898015|gb|EFN28757.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306903165|gb|EFN33755.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 226

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF LG+ L L  T + R F      A+   Y+  ++I G P LV + 
Sbjct: 17  WAGLIFTIPLTLLSFTLGLALGLV-TAVVRLFAPAPFAAVARFYV--WVIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VPRGQ EA
Sbjct: 74  VIFY-----------GLPSMGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPRGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++  +A R  +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWSQAMRRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQTAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + + + +    IYL +S +++    +L  + A  
Sbjct: 183 SYEPLILYIEAALIYLVMSSVLSALQGKLEQRFARY 218



 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L          +G +    RL A    A + R YV V R  P LV +F +
Sbjct: 16  LWAGLIFTIPLTLLSFTLGLALGLVTAVVRLFAPAPFAAVARFYVWVIRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 76  FYGLPSMGILLDAFPAALIGFTLN 99


>gi|307323416|ref|ZP_07602626.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306890905|gb|EFN21881.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 261

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 22/214 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              F F  VLG+VL+L      R       + L + YI  F       LV IAL     F
Sbjct: 66  LLGFGFGLVLGVVLALM-----RLSQVPPYRWLAVAYIEFFR-GVPALLVFIALG----F 115

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+  Q       TV        +AL    AA+IAE +R+G+ AVP+GQMEAA +LG++
Sbjct: 116 GVPLAFQVALDRHVTVM-------LALGLVGAAYIAETMRAGIQAVPKGQMEAARSLGMS 168

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   +++PQA R ++PPLT++ + L K+SSL   +G +    +L   G   +NQ  +
Sbjct: 169 HSRAMASIIVPQAFRIVLPPLTNELVLLTKDSSLVYLLGLSLDQYELSKFGRDALNQ-HR 227

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++  IL+    YL +++ +   + RL A+ A   
Sbjct: 228 SLTPILVAGVCYLIITVPLGQLVRRLEARSAKAR 261



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 28/72 (38%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            VNT      G     ++G ++   RLS      W+   Y+E FR +P L+V   L   V
Sbjct: 58  LVNTAVYTLLGFGFGLVLGVVLALMRLSQVPPYRWLAVAYIEFFRGVPALLVFIALGFGV 117

Query: 153 LSVLPIPDHSIV 164
                +     V
Sbjct: 118 PLAFQVALDRHV 129


>gi|253690234|ref|YP_003019424.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756812|gb|ACT14888.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 244

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 13/210 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V S  LG  L+L    L +       +++   Y+  F   G P LV + L Y 
Sbjct: 18  PLTLQLAVSSVFLGFFLALGL-ALMQLSSFAVLRSISRTYVLFF--RGTPLLVQLFLIYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF +I  S + P          ++LS  T A+  EI+R GL +VP GQ+E+
Sbjct: 75  ------GLGQFQWIRESILWPFLREPHWCALLSLSLCTGAYACEIIRGGLQSVPVGQIES 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A G+      + ++ P A+R  +P   ++ ++++K++SLA  +   ++  +   +I +
Sbjct: 129 ARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKSTSLASIITLMEITGIAARLIAE 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           T +A+E+ L+   IYL +++++   +    
Sbjct: 189 TYRALEVFLVAGAIYLFINLILTRLLMWTE 218



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  LA S +     +   +   +LS+  ++  I R YV  FR  P LV +F +
Sbjct: 13  IIPGIPLTLQLAVSSVFLGFFLALGLALMQLSSFAVLRSISRTYVLFFRGTPLLVQLFLI 72

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 73  YYGLGQFQ 80


>gi|307555365|gb|ADN48140.1| hypothetical amino-acid ABC transporter permease protein YhdY
           [Escherichia coli ABU 83972]
          Length = 367

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPYRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV++PQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|163744544|ref|ZP_02151904.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
 gi|161381362|gb|EDQ05771.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
          Length = 217

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 102/232 (43%), Gaps = 18/232 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +  L   +      L   TLT+ T     V S +LG++ ++      R            
Sbjct: 2   NHFLEKSVQYFPLLLEGVTLTLVTTLAAMVLSTMLGLIWAMMLWSKFRTLRV-------- 53

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             IS   I  +  + +I   + ++F  P L                +  I L    +A+ 
Sbjct: 54  --ISRSFITIIRGIPIIVQLFYIYFVLPEL--------GINLTALQAGIIGLGLAYSAYQ 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+G+ A+ +GQ+EAA ++G+T R   R V+LPQA+R ++PP  +  + LLK+SSL 
Sbjct: 104 AENFRAGIEAIDKGQIEAAYSIGMTDRMIMRRVILPQAIRIVLPPFGNTIIMLLKDSSLV 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +  A+L   G  I + T   I +  +   +YL +++ +      L  + +
Sbjct: 164 STITVAELTRQGQLIASSTFDNITVYTLVAIMYLGMALPLTYLTRNLEKRYS 215


>gi|26987392|ref|NP_742817.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982048|gb|AAN66281.1|AE016256_8 amino acid ABC transporter, permease protein, putative [Pseudomonas
           putida KT2440]
          Length = 273

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 17/282 (6%)

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            + K VA      +  FR    L+    L+   ++     D    +    F N  G    
Sbjct: 6   HSPKPVAKPAGAGLFGFR-TRLLLTWLALFGLFVAFFLSFDLKFAIILEKFPNLAGFKLG 64

Query: 180 TLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                  A + +F  +  +V+S+   FA  L+R  +      +   Y S F    L    
Sbjct: 65  PNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLI-- 122

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 Q+      L Q   + G+       +  IALS    A+++EI R+G++ V RGQ
Sbjct: 123 ------QILLIYLGLPQVGLVPGAI-----SAGIIALSLNYGAYLSEIFRAGILGVARGQ 171

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA+ALG+   +    ++LPQAMR IIPP  +Q++++LK+SSL   +G  +++ +  + 
Sbjct: 172 REAALALGMRTPQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSY 231

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              + + +E++     IY  LSI++ L   RL        ++
Sbjct: 232 GRSSYRYLEMLTTAAVIYWVLSILLELLQARLERHFGKAYQR 273



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L    M+ + ++G      RLS + ++  +   Y   FR  P L+ I  +
Sbjct: 68  FLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLIQILLI 127

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  V  +P         + LN 
Sbjct: 128 YLGLPQVGLVPGAISAGIIALSLNY 152


>gi|331656935|ref|ZP_08357897.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA206]
 gi|331055183|gb|EGI27192.1| arginine transport system permease protein ArtQ [Escherichia coli
           TA206]
          Length = 238

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++               +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMLFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|222081595|ref|YP_002540959.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726274|gb|ACM29363.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 219

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 18/214 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +       +FS++ G+  +L      R     +           + + G PTL+ + 
Sbjct: 21  WTVLWLTVATIIFSWICGLAAALAHGSKWRAARMASA-------FYVWFVRGTPTLIQVF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + Y           F           F++  ++L   + A++AEI+R GL A+PRGQ E+
Sbjct: 74  IIY-----------FGLPAFGIKLSPFVAGVLSLGINSGAYVAEIIRGGLSAIPRGQTES 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+ALG +  +  R ++LPQ  R I+P +T++ ++ LKN+SL   +   +L     T+I  
Sbjct: 123 ALALGFSPSETMRSIILPQVSRIILPSITNEAISTLKNTSLLSTITVVELTLYAQTLIAA 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T +  E  +    IYL L+ ++      L    A
Sbjct: 183 TFRPFEFYITVAIIYLVLTTILTQLSAWLERHYA 216



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 32/104 (30%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    +       WL  + +I + I G        S  +        YV   R  P L+ 
Sbjct: 12  YGPGFVEAAWTVLWLTVATIIFSWICGLAAALAHGSKWRAARMASAFYVWFVRGTPTLIQ 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +F +Y  + +        +     + +N+       +    +A 
Sbjct: 72  VFIIYFGLPAFGIKLSPFVAGVLSLGINSGAYVAEIIRGGLSAI 115


>gi|194466984|ref|ZP_03072971.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194454020|gb|EDX42917.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 212

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L+    T+  +    + S ++G   +L           +  K +  +Y+  F   
Sbjct: 8   EWHPLLTGLWNTILCSLIALIGSLIIGTFFALLE-----ISQHRVVKIIGHVYVEVFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L++I + + L     ++              F +  I L+ YT+AFIAE VR+G+ 
Sbjct: 63  P---LLVITMAFFLIIPMYIVK----------INGFTAGTIGLTLYTSAFIAETVRAGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQME A+A GLT+ +A R ++LPQA R +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 SIDPGQMEGALANGLTYGQAMRYIVLPQAFRVVIPPLGNQFINLVKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  I N T   +    I   +YL +++ ++ +M  L  K+A
Sbjct: 170 YQGNLIANDTLATMPTYFIVGIMYLIITLPLSYYMRHLEKKLA 212



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 40/88 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT   +   +I + IIGT      +S +++V  I  VYVEVFRNIP LV+    
Sbjct: 12  LLTGLWNTILCSLIALIGSLIIGTFFALLEISQHRVVKIIGHVYVEVFRNIPLLVITMAF 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +  +   +   +       G+ L     
Sbjct: 72  FLIIPMYIVKINGFTAGTIGLTLYTSAF 99


>gi|330807008|ref|YP_004351470.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375116|gb|AEA66466.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 229

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + + G++L++    ++R       +A P  YI  F   G P 
Sbjct: 9   WLPKLAQGATLTLELVAIAVIAGLLLAIPLG-IARSSRLWYVRAFPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF+ +  S + P     F      ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GLAQFDAVRSSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PRG++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +L 
Sbjct: 120 AIPRGEIEAARALGMSRPKALLYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T   +EI       YL +S ++     +L   + +
Sbjct: 180 GMARTIIARTYMPVEIFFAAGMFYLLMSFVLVQGFKQLERWLRV 223



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 5/142 (3%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G   T  L    +I   ++   +G  R S    V      Y+  FR  P LV 
Sbjct: 9   WLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSRLWYVRAFPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  +     +   ++                T TM  +   ++   + G + ++  
Sbjct: 69  LFLVYYGLAQFDAVRSSAMWPYL-----RDPFWCATATMTLHTAAYIAEILRGAIQAIPR 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
             +         +   LLYI  
Sbjct: 124 GEIEAARALGMSRPKALLYIML 145


>gi|15641863|ref|NP_231495.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121587301|ref|ZP_01677073.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121727112|ref|ZP_01680286.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147674940|ref|YP_001217395.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153213068|ref|ZP_01948606.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|153818853|ref|ZP_01971520.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153823969|ref|ZP_01976636.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|153825190|ref|ZP_01977857.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|153830548|ref|ZP_01983215.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|183179516|ref|ZP_02957727.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227081990|ref|YP_002810541.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229508042|ref|ZP_04397547.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229511719|ref|ZP_04401198.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229518857|ref|ZP_04408300.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229520321|ref|ZP_04409747.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229523880|ref|ZP_04413285.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229529116|ref|ZP_04418506.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229607589|ref|YP_002878237.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254226031|ref|ZP_04919630.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|254286780|ref|ZP_04961734.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|254848947|ref|ZP_05238297.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255745379|ref|ZP_05419328.1| histidine ABC transporter permease protein HisM [Vibrio cholera
           CIRS 101]
 gi|262153518|ref|ZP_06028647.1| histidine ABC transporter permease protein HisM [Vibrio cholerae
           INDRE 91/1]
 gi|262167418|ref|ZP_06035125.1| histidine ABC transporter permease protein HisM [Vibrio cholerae
           RC27]
 gi|297579379|ref|ZP_06941307.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|298498100|ref|ZP_07007907.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9656390|gb|AAF95009.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548461|gb|EAX58519.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121630490|gb|EAX62882.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|124116115|gb|EAY34935.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|125621414|gb|EAZ49749.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|126510581|gb|EAZ73175.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126518506|gb|EAZ75729.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|146316823|gb|ABQ21362.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|148873978|gb|EDL72113.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|149741169|gb|EDM55220.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|150423207|gb|EDN15154.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|183012927|gb|EDT88227.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227009878|gb|ACP06090.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227013759|gb|ACP09969.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229332890|gb|EEN98376.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229337461|gb|EEO02478.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229342687|gb|EEO07679.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229343546|gb|EEO08521.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229351684|gb|EEO16625.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229355547|gb|EEO20468.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229370244|gb|ACQ60667.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254844652|gb|EET23066.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255737209|gb|EET92605.1| histidine ABC transporter permease protein HisM [Vibrio cholera
           CIRS 101]
 gi|262024115|gb|EEY42809.1| histidine ABC transporter permease protein HisM [Vibrio cholerae
           RC27]
 gi|262030645|gb|EEY49280.1| histidine ABC transporter permease protein HisM [Vibrio cholerae
           INDRE 91/1]
 gi|297536973|gb|EFH75806.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297542433|gb|EFH78483.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|327484413|gb|AEA78820.1| Histidine ABC transporter, permease protein HisM [Vibrio cholerae
           LMA3894-4]
          Length = 225

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 97/217 (44%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   S V+G++ ++    ++R+  +K        YI    + G P L
Sbjct: 10  LPIYLSGLWTTVWLVSLSLVIGLLCAIPL-AIARNSKQKWFSLPAWGYIYF--LRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + Q+  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I     +   + 
Sbjct: 181 VNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRF 217



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 33/102 (32%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++   +    +   R S  K  +     Y+   R  P LV ++ +
Sbjct: 13  YLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|209543091|ref|YP_002275320.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530768|gb|ACI50705.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 243

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 18/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +   +    F    +        +T+       VF  +LG+ L++      +    +   
Sbjct: 1   MQVWNWHGFFTYLTSPYIFRGALVTLWMTFAAMVFGCLLGLALAVM-----KRSRHRVLS 55

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                Y+  F   G P LV + + Y      P L     +             I LS   
Sbjct: 56  VPARFYVWLF--RGTPLLVQLVVIYA---GLPKLDIRLSVT--------ACAVIGLSLNE 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI+R+GL AVP GQ+ AA ALG+   + +  +  PQA R IIPPL +    LLK 
Sbjct: 103 AAYLAEIIRAGLNAVPPGQIAAARALGMDEWQISSRIAFPQAFRLIIPPLGNSVNGLLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +S+   +   +L+     ++      +E+  +    YL ++        R+        +
Sbjct: 163 TSVTSVISMEELMQRSQILVQDQFMVLELFSVAALYYLFMTTAWDFLQRRIERHAERPYR 222

Query: 398 K 398
           +
Sbjct: 223 R 223



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I  G + T W+ F+ M+   ++G  +   + S +++++   R YV +FR  P LV +  
Sbjct: 17  YIFRGALVTLWMTFAAMVFGCLLGLALAVMKRSRHRVLSVPARFYVWLFRGTPLLVQLVV 76

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +Y  +  +      +     G+ LN        +    NA
Sbjct: 77  IYAGLPKLDIRLSVTACAVIGLSLNEAAYLAEIIRAGLNA 116


>gi|114566598|ref|YP_753752.1| hypothetical protein Swol_1071 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337533|gb|ABI68381.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 235

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 14/226 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  + +  +           +I   S   G+ L L A  L +    K      ++YI  F
Sbjct: 22  GFQVVSHNMGHLMKGTLLTLEITALSVAFGMFLGLLA-ALLKMSPYKILAIPGIVYIDFF 80

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G P  V I L Y           F  +     +  F +  I  S  + A+IAEIVR+
Sbjct: 81  --RGTPLFVQILLFY-----------FGILPLVFDATSFQAAVIVCSLNSGAYIAEIVRA 127

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV RGQ EAA +LG+ +R+A   V+LPQA + +IPP+ ++++ +LK++SL   +G  
Sbjct: 128 GIQAVDRGQTEAARSLGMNNRQAMWYVILPQAYKIVIPPMINEFIAMLKDTSLVAVIGAQ 187

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L   G  +++ T +A  I       YL L+ ++++  + L  ++A
Sbjct: 188 ELTHQGRILVSVTYEAAWIWGTVALFYLLLTRLLSMLGDYLEKRLA 233



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  +    +     +G L    ++S  K++A    VY++ FR  P  V I   
Sbjct: 33  LMKGTLLTLEITALSVAFGMFLGLLAALLKMSPYKILAIPGIVYIDFFRGTPLFVQILLF 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +L ++              LN+       +     A
Sbjct: 93  YFGILPLVFDATSFQAAVIVCSLNSGAYIAEIVRAGIQA 131


>gi|298294041|ref|YP_003695980.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930552|gb|ADH91361.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 226

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 15/228 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L     +N+ G  F      T     V   + G++       L+R   ++  +     
Sbjct: 1   MNLLDLSVVNDYGSVFLQGLAMTTFLTVVVILLAGVIA--IPIALARLSPKRWIRWPADF 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I   P ++ +   Y +                       +  I L+   +AF++
Sbjct: 59  YVEF--IRATPLILQLIYIYYV-----------LPSAGIRLEPVTAAIIGLTINYSAFMS 105

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RSG+ +VPR Q EAA +LGL+       V+ PQA R ++P L +  + L K+++LA 
Sbjct: 106 EVYRSGIQSVPRSQYEAAQSLGLSPTITFVKVIFPQAFRVVLPALGNYLIALFKDTALAS 165

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            V   +L+  G  I  +  Q   +  +   +Y ++    AL + RL  
Sbjct: 166 VVTVQELMFSGQIIAARNYQYFTVYTVTAILYFAVGYPSALLVRRLER 213



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 42/112 (37%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++  +  + Y +  L G   T +L    ++ A +I   +   RLS  + + W    YVE 
Sbjct: 3   LLDLSVVNDYGSVFLQGLAMTTFLTVVVILLAGVIAIPIALARLSPKRWIRWPADFYVEF 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            R  P ++ + ++Y  + S     +       G+ +N              +
Sbjct: 63  IRATPLILQLIYIYYVLPSAGIRLEPVTAAIIGLTINYSAFMSEVYRSGIQS 114


>gi|298379950|ref|ZP_06989555.1| arginine transporter permease subunit ArtQ [Escherichia coli
           FVEC1302]
 gi|298279648|gb|EFI21156.1| arginine transporter permease subunit ArtQ [Escherichia coli
           FVEC1302]
          Length = 226

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 1   MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 60

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 61  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 119

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 120 MGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 179

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 180 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 224


>gi|86605398|ref|YP_474161.1| cystine ABC transporter, permease protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86553940|gb|ABC98898.1| cystine ABC transporter, permease protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 234

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                F +  + T  ++ + S +    L+ F + L+         +L  LY+S  L+ G 
Sbjct: 27  REWWWFISQGVGTTFQLSLVSILCATTLA-FLSALAGLSQIAPLSSLSALYVS--LMRGT 83

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P  +     YQ       L Q   + GS     F S  +ALS    A+++EI R+G+ A+
Sbjct: 84  PLFLQFLFIYQ------ALPQLGLVFGS-----FTSAVLALSLNYGAYMSEIFRAGIQAI 132

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA ALGL   +    ++LPQA R ++P + +Q++ + K+++LA A+   +L+  
Sbjct: 133 PIGQREAAYALGLKPWQTLWCIILPQAFRIVLPDIGNQFIAMQKDTALASAIALQELMGR 192

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                       E +++    Y  L+++++ F  RL   +A 
Sbjct: 193 ARQAGLPRQHFFEALVVAALWYWLLTLILSFFQGRLERYLAR 234



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 37/106 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G   TF L+   ++ AT +  L     LS    ++ +  +YV + R  P  + 
Sbjct: 29  WWWFISQGVGTTFQLSLVSILCATTLAFLSALAGLSQIAPLSSLSALYVSLMRGTPLFLQ 88

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             F+Y+++  +  +          + LN              A   
Sbjct: 89  FLFIYQALPQLGLVFGSFTSAVLALSLNYGAYMSEIFRAGIQAIPI 134


>gi|126464227|ref|YP_001045340.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126106038|gb|ABN78568.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 219

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 13/192 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L++    +  +     YI    I G P L+ I + Y   F  P L           
Sbjct: 39  LLAALAQRSELRLVRGAAAFYIWF--IRGTPALIQIFIIY---FGLPQL--------GLR 85

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  IAL   + A++AEIVRSGL A+ RGQ E+A+ALG +  +  R ++LPQ  R 
Sbjct: 86  LSPFTAGVIALGINSGAYVAEIVRSGLSAIHRGQTESALALGFSQSQTMRTIVLPQVFRI 145

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+P +T++ ++ LKN+SL   +   +L     T+I+ T +  +  +    IYL L+ ++ 
Sbjct: 146 ILPSITNEAISTLKNTSLLSTITVVELTLYAQTLISATFRPFDFYIAVAIIYLVLTTVLT 205

Query: 383 LFMNRLNAKIAL 394
              N    + A 
Sbjct: 206 QIANWAERRYAR 217


>gi|297582812|ref|YP_003698592.1| polar amino acid ABC transporter inner membrane subunit [Bacillus
           selenitireducens MLS10]
 gi|297141269|gb|ADH98026.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           selenitireducens MLS10]
          Length = 227

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   L  R L      +     I + S VLG+V+SLF   L+R       +    
Sbjct: 5   EWQYIFDPALAWRALPTVLEGLTLTLYISLISMVLGLVMSLFL-ALARQSGHLYLQIPAR 63

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS   + G+P L+++ + Y           F F           +  I  S  +AA++
Sbjct: 64  MYISF--MRGVPILIILFMLY-----------FGFPYIGIEFTAVNAAIIGFSFNSAAYM 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RS + AVP+GQ EAA +LGL++ K  R V+LPQA R  +PPLT+  L+L+K SSLA
Sbjct: 111 AEINRSAIDAVPKGQWEAARSLGLSYTKMMRQVVLPQASRIAVPPLTNVLLDLIKASSLA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   ++  +   +  +    + + ++   IY  +  ++    N L  + A  
Sbjct: 171 AMITVPEIFQMSRIVAGREMDYMTMFILVAMIYWVICTLMTQLQNYLEKRFARY 224



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T +++   M+   ++   +   R S +  +    R+Y+   R +P 
Sbjct: 15  AWRALPTVLEGLTLTLYISLISMVLGLVMSLFLALARQSGHLYLQIPARMYISFMRGVPI 74

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L+++F LY     +            G   N+            +A
Sbjct: 75  LIILFMLYFGFPYIGIEFTAVNAAIIGFSFNSAAYMAEINRSAIDA 120


>gi|99080305|ref|YP_612459.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99036585|gb|ABF63197.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 268

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               R    F+ +  + +P++ +  ++ F L P LV +            +   NF    
Sbjct: 77  WLVLRQVCRFYVEVVRGVPIIVLLLYVAFVLAPALVDLRNWLGGFLGLEDIRTRNF---- 132

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
              P      +AL    +AFIAE+ R+GL +VP GQ+EAA ALGL+  K  R V+ PQA+
Sbjct: 133 ---PLLWRAIVALMIAYSAFIAEVFRAGLQSVPDGQIEAAKALGLSGWKRFRFVVFPQAI 189

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+PPL + ++ L+K+SSL   +G  D+  +G        +  E   +   IYL+++I 
Sbjct: 190 RTILPPLGNDFVALVKDSSLVSVLGVLDITQLGKVTAASNFRYFETYNMVALIYLAMTIS 249

Query: 381 IALFMNRLNAKIALKE 396
           ++L +  L   +  K+
Sbjct: 250 LSLALRALERHLRSKQ 265


>gi|291549386|emb|CBL25648.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus torques L2-14]
          Length = 236

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 12/232 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYIST 226
           +FLN  G       +     I +   ++GIV+   +   R+   +         +     
Sbjct: 14  IFLNQNGYVKVVQGLHNTLLIAICGLIIGIVIGTLIATVRVIPKYKTLPRVLNHICSFYV 73

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            L  G P +V + + Y +     +L  F                +     + A+I+EI+R
Sbjct: 74  ALFRGTPMVVQLLIFYYV-----LLPIFG-----VKITGVQVSMVVFGLNSGAYISEIMR 123

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQMEA  A+GL+   +   +++PQA+++I+P L +++++L+K +S+   VG 
Sbjct: 124 SGIQSVDPGQMEAGRAVGLSFGTSMMKIVIPQAVKNILPTLGNEFISLIKETSVVSFVGA 183

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ADL      I + + + +   L+   IY++L ++I L +  L   +   +++
Sbjct: 184 ADLYVAFNYIGSNSYEFMVPYLVMALIYIALVLVITLLVKLLERSLKKSDRR 235



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRNIPPLVV 144
           + G  NT  +A  G+I   +IGTL+   R+        +++  IC  YV +FR  P +V 
Sbjct: 25  VQGLHNTLLIAICGLIIGIVIGTLIATVRVIPKYKTLPRVLNHICSFYVALFRGTPMVVQ 84

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMF 170
           +   Y  +L +  +    + +   +F
Sbjct: 85  LLIFYYVLLPIFGVKITGVQVSMVVF 110


>gi|120403817|ref|YP_953646.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956635|gb|ABM13640.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 308

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 16/272 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +    +I  +   +      P +        F + R L     T+       +   V
Sbjct: 25  WRWLAAAAIIVLVGLFLYGAATNPAYGWSTFGEYFFHERILLGVFNTLQLTIYSMIIGIV 84

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-------YQLHFDK 248
           LG+ L++      R        ++   ++  ++  G P  V +A           +    
Sbjct: 85  LGVFLTVM-----RLSDNPVLSSVA--WVFLWIFRGTPIYVQLAFWGLFPTIYQNIQLGV 137

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F  +    +S  F+   I L    AA++AEIVR+G+++VP GQMEA+ ALG++  
Sbjct: 138 PFGPSFFHLDLQDLSIPFVLAVIGLGLNEAAYMAEIVRAGIMSVPEGQMEASTALGMSWG 197

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVG-GTIINQTGQAIEI 366
           KA R  +LPQAMR IIPP  ++ ++LLK +SL  AV +A D+ S+    I  +  + + +
Sbjct: 198 KAMRRTVLPQAMRVIIPPTGNELISLLKTTSLVTAVPYAFDVYSIATREIAARIFEPVPL 257

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+    YL ++ ++ +    L    +    +
Sbjct: 258 LLVAAAWYLVITSILMVGQFYLERYFSRGASR 289



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 51/165 (30%), Gaps = 28/165 (16%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           + A  + V+    +     N      + G  F  ER                     IL+
Sbjct: 28  LAAAAIIVLVGLFLYGAATNPAYGWSTFGEYFFHER---------------------ILL 66

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G  NT  L    MI   ++G  +   RLS N +++ +  V++ +FR  P  V + F    
Sbjct: 67  GVFNTLQLTIYSMIIGIVLGVFLTVMRLSDNPVLSSVAWVFLWIFRGTPIYVQLAFWGL- 125

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                  P     +  G+             +     + V    L
Sbjct: 126 ------FPTIYQNIQLGVPFGPSFFHLDLQDLSIPFVLAVIGLGL 164


>gi|229031799|ref|ZP_04187788.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1271]
 gi|228729545|gb|EEL80533.1| Arginine transport system permease protein artQ [Bacillus cereus
           AH1271]
          Length = 197

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M   A   +  F+LG +L+L      R  +             T +  G P ++ + + Y
Sbjct: 1   MKIVAVSALVGFILGTLLALCKIARIRALNIAA-------DFYTSIFRGTPLVLQLMIIY 53

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  P +  +         P F++  +A S  + A+++E++R+G+ AV  GQ EAA+A
Sbjct: 54  ---FGVPQIIGYEI-------PAFVAAVLAFSLNSGAYMSEVIRAGIQAVDNGQTEAAMA 103

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+ + K  R ++ PQA+++I+P L +++  L K S++   +G  DL+     +  +T +
Sbjct: 104 LGIPYGKMMRNIIFPQALKNILPALVNEFATLTKESAVVTVIGATDLMRRAYIVGGETFK 163

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +E +L    IY  L I++ L    +  ++   +
Sbjct: 164 YLEPLLFVGLIYYMLVIILTLVGKAIEGRMKKSD 197


>gi|215488577|ref|YP_002331008.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|215266649|emb|CAS11088.1| predicted amino-acid transporter subunit [Escherichia coli O127:H6
           str. E2348/69]
 gi|320194756|gb|EFW69386.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli WV_060327]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPYRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|157158180|ref|YP_001464745.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           E24377A]
 gi|193066457|ref|ZP_03047502.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E22]
 gi|194430236|ref|ZP_03062733.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B171]
 gi|218555835|ref|YP_002388748.1| amino-acid ABC transporter membrane protein [Escherichia coli IAI1]
 gi|218696970|ref|YP_002404637.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|260846075|ref|YP_003223853.1| putative transport system permease protein [Escherichia coli
           O103:H2 str. 12009]
 gi|307314972|ref|ZP_07594560.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|331670096|ref|ZP_08370941.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA271]
 gi|331679344|ref|ZP_08380016.1| putative transport system permease protein [Escherichia coli H591]
 gi|157080210|gb|ABV19918.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E24377A]
 gi|192925886|gb|EDV80535.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E22]
 gi|194411707|gb|EDX28032.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B171]
 gi|218353702|emb|CAU99966.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218362603|emb|CAR00228.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|257761222|dbj|BAI32719.1| putative transport system permease protein [Escherichia coli
           O103:H2 str. 12009]
 gi|306905555|gb|EFN36087.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|315062569|gb|ADT76896.1| predicted amino-acid transporter subunit [Escherichia coli W]
 gi|323376844|gb|ADX49112.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|331063009|gb|EGI34923.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA271]
 gi|331073409|gb|EGI44732.1| putative transport system permease protein [Escherichia coli H591]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|77414490|ref|ZP_00790639.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77159469|gb|EAO70631.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
          Length = 267

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 106/259 (40%), Gaps = 9/259 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++   + + + L               +      L    +T+       +F  +L ++ +
Sbjct: 5   ILTGGWSWYNNLVSQVPAGKLFSWKAVLDAIPSILERLPITLLLTVAGALFGLILALIFA 64

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
           +      +  +       P+  +    + G P LV + L Y     F K +  ++ F   
Sbjct: 65  IVKINRVKILY-------PIQALFVSFLRGTPILVQLMLSYYGIPLFLKFLNQKYGFDWN 117

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P  +    A +   AA+ +E +R+ +++V +G++EAA +LG+T  +  R V++P A
Sbjct: 118 INAIPASVFAITAFAFNEAAYTSETIRAAILSVDQGEIEAARSLGMTSAQVYRRVIIPNA 177

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
                P L +  + L K +SLA   G  ++ +    +     +  E  +    +Y ++S 
Sbjct: 178 AVVATPTLINTLIGLTKGTSLAFNAGIVEMFAQAQIMGGSDYRYFERYISVALVYWAVSF 237

Query: 380 MIALFMNRLNAKIALKEKK 398
           +I    N +  K+A+K  +
Sbjct: 238 LIEQLGNAIERKMAIKAPR 256


>gi|146311036|ref|YP_001176110.1| arginine transporter permease subunit ArtQ [Enterobacter sp. 638]
 gi|145317912|gb|ABP60059.1| L-arginine ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 238

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 8/221 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL- 237
                 +    L +V +++                   + LP + +  F+ FG   L+L 
Sbjct: 17  LAVCALIIGLALAMVFAVWESAKWRPIAWIGSALVTVLRGLPEILVVLFIYFGSSQLLLT 76

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           ++  + L+     +     I    VSP F+   IALS   +A+ ++ +R  L AVP GQ 
Sbjct: 77  LSDGFTLNLGFAQIPVQMQIENFDVSP-FLCGVIALSLLYSAYASQTLRGALKAVPIGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I 
Sbjct: 136 ESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 196 TRTQEPFTWYIVAAAIYLVITLLSQYVLKRIDLRATRFERR 236


>gi|323979010|gb|EGB74088.1| inner membrane transport system [Escherichia coli TW10509]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IVPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|22536475|ref|NP_687326.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010355|ref|NP_734750.1| hypothetical protein gbs0281 [Streptococcus agalactiae NEM316]
 gi|76786946|ref|YP_329015.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798684|ref|ZP_00780907.1| amino acid ABC transporter permease protein yjgD [Streptococcus
           agalactiae 18RS21]
 gi|77404971|ref|ZP_00782072.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77410629|ref|ZP_00786989.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|22533305|gb|AAM99198.1|AE014204_16 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|23094707|emb|CAD45926.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76562003|gb|ABA44587.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76585965|gb|EAO62500.1| amino acid ABC transporter permease protein yjgD [Streptococcus
           agalactiae 18RS21]
 gi|77163344|gb|EAO74295.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77176410|gb|EAO79178.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 267

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 106/259 (40%), Gaps = 9/259 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++   + + + L               +      L    +T+       +F  +L ++ +
Sbjct: 5   ILTGGWSWYNNLVSQVPAGKLFSWKAVLDAIPSILERLPITLLLTVAGALFGLILALIFA 64

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
           +      +  +       P+  +    + G P LV + L Y     F K +  ++ F   
Sbjct: 65  VVKINRVKILY-------PIQALFVSFLRGTPILVQLMLSYYGIPLFLKFLNQKYGFDWN 117

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P  +    A +   AA+ +E +R+ +++V +G++EAA +LG+T  +  R V++P A
Sbjct: 118 INAIPASVFAITAFAFNEAAYTSETIRAAILSVDQGEIEAARSLGMTSAQVYRRVIIPNA 177

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
                P L +  + L K +SLA   G  ++ +    +     +  E  +    +Y ++S 
Sbjct: 178 AVVATPTLINTLIGLTKGTSLAFNAGIVEMFAQAQIMGGSDYRYFERYISVALVYWAVSF 237

Query: 380 MIALFMNRLNAKIALKEKK 398
           +I    N +  K+A+K  +
Sbjct: 238 LIEQLGNAIERKMAIKAPR 256


>gi|323967297|gb|EGB62720.1| inner membrane transport system [Escherichia coli M863]
 gi|327253649|gb|EGE65278.1| arginine transport system permease protein artQ [Escherichia coli
           STEC_7v]
          Length = 238

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F                       + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWVGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGIVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|253576692|ref|ZP_04854019.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843902|gb|EES71923.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 220

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 113/237 (47%), Gaps = 17/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             ++   M   +  L+    T+   A   +  F LG++++L      R       + L  
Sbjct: 1   MDLISMFMEYRSYFLAGVQYTLLLAAISVICGFFLGLLIALL-----RMSPWGILRFLGH 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +++    + G P +V + +             F F+     +P   S  I LS  ++A++
Sbjct: 56  VWVEF--LRGTPMMVQLLII---------HYGFAFMFDINFTP-IQSGAITLSINSSAYL 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R+G+  V RGQ EAA +LG+T   A R +++PQA++S++P + ++++ ++K SS+ 
Sbjct: 104 AEIFRAGIQGVDRGQGEAARSLGMTKGMAMRHIIIPQAIKSVLPAIGNEFITIIKESSIV 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G A+L+    +++  T   +   LI   +Y  L+  ++  +     K+   + +
Sbjct: 164 SIIGTAELIYQAQSVVTITYDGMTPYLIIAIMYFILTFTLSRILGVFERKLKTSDHR 220



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +  L G   T  LA   +I    +G L+   R+S   ++ ++  V+VE  R  P +V 
Sbjct: 10  YRSYFLAGVQYTLLLAAISVICGFFLGLLIALLRMSPWGILRFLGHVWVEFLRGTPMMVQ 69

Query: 145 IFFLYKSV 152
           +  ++   
Sbjct: 70  LLIIHYGF 77


>gi|227893085|ref|ZP_04010890.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227865063|gb|EEJ72484.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+  +    +FS +LG+  +L           K G+ +  +YI+ F    
Sbjct: 9   WGAFLTGFWNTILCSIIALIFSLILGVFFALLEVA-----PPKFGRVIAKVYIAIF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ + Y +                     F +  I L+ YT+AFIAE VR+G+ +
Sbjct: 62  IPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 IGTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I   T Q I+  +I    YL L++ ++ +M  L  K+A
Sbjct: 171 QAQLIAFSTFQTIDTYIIVGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 41/105 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A L GF NT   +   +I + I+G       ++  K    I +VY+ +FRNIP LV++
Sbjct: 9   WGAFLTGFWNTILCSIIALIFSLILGVFFALLEVAPPKFGRVIAKVYIAIFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
              Y  V   +           G+ L        T+    N+   
Sbjct: 69  MIFYLIVPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINSIGT 113


>gi|254449741|ref|ZP_05063178.1| ABC transporter permease protein [Octadecabacter antarcticus 238]
 gi|198264147|gb|EDY88417.1| ABC transporter permease protein [Octadecabacter antarcticus 238]
          Length = 221

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
               +     +    +IF   FV G+ L L    L+R+   +  +     +I  F     
Sbjct: 11  WEYRAALWTGLINTVRIFAICFVTGLSLGLMMG-LARYSVRRWLRWPAACFIEFF--RNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I   +  +F  P+L  F            M+  + ++  +AAF AEI R G+ ++
Sbjct: 68  PVLVQI---FWFYFAFPILAPFEI-------SALMAAALGITLNSAAFSAEIFRGGIQSI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EA  A+G+ HR+    ++LPQA+R ++P LT++ + + K ++LA A+ +AD++  
Sbjct: 118 DPGQWEAGRAIGMRHREIMARIILPQAVRRMLPALTNRGIEIFKMTTLASAIAYADVLHQ 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I +     IE   +    +  +   I      L  ++A  +
Sbjct: 178 ARLIASVNYNPIEAYTVVAIAFFVILYPIVRATYVLERRMAKGD 221



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 37/81 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S   Y  A+  G +NT  +     +    +G ++G  R S  + + W    ++E FR
Sbjct: 6   DFGSVWEYRAALWTGLINTVRIFAICFVTGLSLGLMMGLARYSVRRWLRWPAACFIEFFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           N P LV IF+ Y +   + P 
Sbjct: 66  NTPVLVQIFWFYFAFPILAPF 86


>gi|168802618|ref|ZP_02827625.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC508]
 gi|189375435|gb|EDU93851.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC508]
 gi|320189619|gb|EFW64278.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. EC1212]
 gi|320639916|gb|EFX09507.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320645632|gb|EFX14641.1| putative transport system permease protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320650942|gb|EFX19399.1| putative transport system permease protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320662013|gb|EFX29421.1| putative transport system permease protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320666849|gb|EFX33828.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|326337967|gb|EGD61801.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. 1125]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y    ++  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|74313797|ref|YP_312216.1| putative transport system permease [Shigella sonnei Ss046]
 gi|73857274|gb|AAZ89981.1| putative transport system permease protein [Shigella sonnei Ss046]
 gi|332086438|gb|EGI91585.1| general L-amino acid transport system permease protein aapM
           [Shigella dysenteriae 155-74]
          Length = 368

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|33152996|ref|NP_874349.1| amino-acid ABC transporter permease protein [Haemophilus ducreyi
           35000HP]
 gi|33149221|gb|AAP96738.1| amino-acid ABC transporter permease protein [Haemophilus ducreyi
           35000HP]
          Length = 238

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/247 (22%), Positives = 108/247 (43%), Gaps = 13/247 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + +++L  LP  D + V            +   +++      F+   ++ ++++L     
Sbjct: 1   MLENLLFQLPFMDEARVKLVMDAFWPMLQAMVLVSIPLAIVSFIIGMIIAVLVALVRITS 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 +    +   YIS  +I G P LV I++ +   +  P L                
Sbjct: 61  VSGMMHRILLVIIQAYIS--IIRGTPMLVQISIVF---YGLPAL--------GFYVDPIP 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + AVP+GQ EA  ++G+T+ +  R ++ PQA+R  IPPL
Sbjct: 108 AAIIGFSLNIGAYASETVRAAISAVPKGQWEAGYSIGMTYLQTFRRIIAPQAIRVAIPPL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +   FIY     ++     R
Sbjct: 168 SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAAFIYWCFCWILFGIQAR 227

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 228 LEHRFDR 234


>gi|145224166|ref|YP_001134844.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|315444501|ref|YP_004077380.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|145216652|gb|ABP46056.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium gilvum PYR-GCK]
 gi|315262804|gb|ADT99545.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 310

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 16/272 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +   V+I  +   +        +          N R L     T+       V   V
Sbjct: 26  WRWVAAAVIIVLVGLFLWGAATNDAYGWSTYAEYLFNERILLGVFNTIQLTVYSMVIGIV 85

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-------YQLHFDK 248
           LG++L++      R        ++   ++  ++  G P  V +A           +    
Sbjct: 86  LGVILTIM-----RLSSNPVLSSVA--WVFLWIFRGTPVYVQLAFWGLMPTIYQNIQLGV 138

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P            +S  F    I L+   AA++AEIVR+G+ +VP GQ+EA+ ALG++  
Sbjct: 139 PFGPSLLHFDLQDLSFPFALAVIGLALNEAAYMAEIVRAGITSVPEGQLEASTALGMSWG 198

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVG-GTIINQTGQAIEI 366
           +A R  +LPQAMR IIPP  ++ ++LLK +SL  AV +A DL S+    I  +  + + +
Sbjct: 199 RAMRRTVLPQAMRVIIPPTGNEVISLLKTTSLVTAVPYAFDLYSIATREIAARIFEPVPL 258

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+    YL ++ ++ +    L    +    +
Sbjct: 259 LLVAATWYLVITSILMVGQFYLERYFSRGVSR 290



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL+G  NT  L    M+   ++G ++   RLS+N +++ +  V++ +FR  P  V + F 
Sbjct: 65  ILLGVFNTIQLTVYSMVIGIVLGVILTIMRLSSNPVLSSVAWVFLWIFRGTPVYVQLAFW 124

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                    +P     +  G+      L F    +     + V    L
Sbjct: 125 GL-------MPTIYQNIQLGVPFGPSLLHFDLQDLSFPFALAVIGLAL 165


>gi|288905750|ref|YP_003430972.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|306831848|ref|ZP_07465004.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978783|ref|YP_004288499.1| putative glutamine transport system permease [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288732476|emb|CBI14048.1| Putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
 gi|304426046|gb|EFM29162.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178711|emb|CBZ48755.1| putative glutamine transport system permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 234

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 11/203 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + + +L  VL +    +S     +  KA+  +Y+  F     P LV     Y    
Sbjct: 34  LGMSICALILAFVLGVIFGAMS-SSKNRVLKAIARVYVEVF--QNTPLLVQFVFVYYGLA 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G  +   F +  + +  Y  A+IAE++RSG+ AVP+GQ EAA++ G T
Sbjct: 91  IM--------TNGVIMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALSQGFT 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +   L++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++        +T   +  
Sbjct: 143 YSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYVPA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
                 +Y  +   +A +  R  
Sbjct: 203 FAGAALLYFIMCFPLATWARRKE 225



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 37/64 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +I A ++G + GA   S N+++  I RVYVEVF+N P LV   F+
Sbjct: 26  FAKGFLYTLGMSICALILAFVLGVIFGAMSSSKNRVLKAIARVYVEVFQNTPLLVQFVFV 85

Query: 149 YKSV 152
           Y  +
Sbjct: 86  YYGL 89


>gi|229587873|ref|YP_002869992.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359739|emb|CAY46588.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 229

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 107/224 (47%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + +LG++L++    ++R       ++LP  YI  F   G P 
Sbjct: 9   WLPKFIQGAILTLELVGIAVILGLILAIPLG-VARASKRWYVRSLPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF+ +  S + P     F      ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GLAQFDAVRTSAMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P G++EAA ALG++  K    ++LP+A R  +P  +++ + +LK SSLA  V   +L 
Sbjct: 120 AIPPGEIEAARALGMSKPKTLFYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +    +++       YL +S ++      L   + +
Sbjct: 180 GMARTIIARNYLTVDMFFTAGVFYLLMSYLLVRGFKLLERWLRV 223



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    + G + T  L    +I   I+   +G  R S    V  +   Y+  FR  P LV 
Sbjct: 9   WLPKFIQGAILTLELVGIAVILGLILAIPLGVARASKRWYVRSLPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     +   ++   
Sbjct: 69  LFLVYYGLAQFDAVRTSAMWPY 90


>gi|256830363|ref|YP_003159091.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256579539|gb|ACU90675.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 249

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 10/218 (4%)

Query: 188 KIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
              V +  LG+   L  T      RL    + +  + LP L +     F L   +   + 
Sbjct: 29  WSAVIALFLGVWAGLARTSPSLYLRLVGSTYVELCRNLPPLVLIFLCYFFLADQIAPTIG 88

Query: 242 YQLHF----DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            Q       D         IG       F++    L  Y  A++AEIVR G+ +V  GQ 
Sbjct: 89  LQDALRTAPDTVKAVAGVLIGRLDQVDAFVTAAFTLGLYEGAYVAEIVRGGIRSVDAGQW 148

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  A G         +++PQA+R++IPPL  Q ++ +K+S++   +   +L   G  ++
Sbjct: 149 EAGRAQGFPRFGLMVFIIMPQAVRNMIPPLAGQIISTIKDSAIVSVISIQELTFQGMQLM 208

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             T   +E+      +Y  L+   ++   RL  ++   
Sbjct: 209 ATTYLTMEVWTCVALLYFVLTFSCSMGAARLEHRLRRS 246



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 27/55 (49%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           T  L     + A  +G   G  R S +  +  +   YVE+ RN+PPLV+IF  Y 
Sbjct: 23  TLRLTCWSAVIALFLGVWAGLARTSPSLYLRLVGSTYVELCRNLPPLVLIFLCYF 77


>gi|170684312|ref|YP_001745540.1| His/Glu/Gln/Arg/opine ABC transporter permease [Escherichia coli
           SMS-3-5]
 gi|170522030|gb|ACB20208.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli SMS-3-5]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPYRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|153836364|ref|ZP_01989031.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|149750266|gb|EDM61011.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
          Length = 306

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 18/280 (6%)

Query: 123 KLVAWICRVY-VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++  IC +  V ++      V   + +K    +L  P     LP+              
Sbjct: 28  WVLLIICGICGVWLYHRSSVGVHYLWQWKEAFELLFTPRSDGGLPY-------FFQGLIS 80

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYISTFLIFGLPT 234
           T+  +     F+ VLG +L L     S          +       PL+++  F  F    
Sbjct: 81  TLRLSIWGISFALVLGTLLGLARFSRSVWLRTPANAFIQLVRNIPPLVFVFIFYFFISNQ 140

Query: 235 LVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L+ +     L   +  +P   Q    G S +     S  + +   ++A+IAE+VR+GL +
Sbjct: 141 LIPLLGLEDLLRNYNGEPNALQSFLFGPSNLWENLASGVLCVGLLSSAYIAEVVRAGLQS 200

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+   +   ++  
Sbjct: 201 IDQGQWEAANSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVSLISIQEMTF 260

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  + N +G   EI LI  F Y  +   ++L    +  K
Sbjct: 261 VGTEMANSSGYIFEIWLIVGFSYFLICFGLSLIFRYIEKK 300



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  L+  G+  A ++GTL+G  R S +  +      ++++ RNIPPL
Sbjct: 73  YFFQGLISTLRLSIWGISFALVLGTLLGLARFSRSVWLRTPANAFIQLVRNIPPL 127


>gi|229159505|ref|ZP_04287521.1| Amino acid ABC transproter, permease [Bacillus cereus R309803]
 gi|228623962|gb|EEK80772.1| Amino acid ABC transproter, permease [Bacillus cereus R309803]
          Length = 230

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VLG ++ L      R  + K   ++  +YI   +I G P +V IA+ Y  
Sbjct: 18  VTLQLTLTSLVLGSLIGLL-FAFFRISNNKILNSIAHVYI--AIIRGTPLIVQIAILY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V   F +  IAL+ +  A+I EI R  + +V RGQ+EAA +LG
Sbjct: 73  ----------FGITSVIVFTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +  A R ++LPQA R  +PPL +Q++  LK+SSL   VG ++L   G +I     Q +
Sbjct: 123 MPYPLAMRRIILPQAFRLSLPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I    YL L ++   F+N L  ++  KE
Sbjct: 183 DTYVIVGLYYLVLVLLFTYFVNLLEKRLQRKE 214



 Score = 43.4 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   V T  L  + ++  ++IG L    R+S NK++  I  VY+ + R  P +V I  L
Sbjct: 12  LLKATVVTLQLTLTSLVLGSLIGLLFAFFRISNNKILNSIAHVYIAIIRGTPLIVQIAIL 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  + SV+               N   +
Sbjct: 72  YFGITSVIVFTPFWAGAIALAIHNGAYI 99


>gi|120401318|ref|YP_951147.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119954136|gb|ABM11141.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 510

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL+   L +    M    ++ ++ F  G+ L +    L+     ++     +      + 
Sbjct: 4   FLHYLTLPWLIDGMLFTLQLTLYGFTGGLFLGVL---LAALQLTRSRALTAIGRTYVVIY 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ +   +      P +            P   +  +AL+   A FI+EI+RSG+
Sbjct: 61  RGTPLILQLVFVFT---ALPHI--------GITLPPVAAGSVALAMNEAVFISEILRSGI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             V  GQ  A  ALGL  RK  R V+ PQA RS++P L +++++ +KNS+LA  +   +L
Sbjct: 110 KGVDPGQSLAGRALGLEPRKLMRRVIAPQAFRSMVPALGNEFISTMKNSALASVIAVPEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 + + T     I      +YL+L+ ++++    L   + L  
Sbjct: 170 TLRTQQLASSTFDYFSIYFATAVMYLALTAVLSIIQLLLEDALNLDR 216



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 1/123 (0%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G + T  L   G      +G L+ A +L+ ++ +  I R YV ++R  P ++ + F
Sbjct: 12  WLIDGMLFTLQLTLYGFTGGLFLGVLLAALQLTRSRALTAIGRTYVVIYRGTPLILQLVF 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           ++ ++  +             + +N        L           S   G  L L   +L
Sbjct: 72  VFTALPHIGITLPPVAAGSVALAMNEAVFISEILRSGIKGVDPGQSLA-GRALGLEPRKL 130

Query: 208 SRH 210
            R 
Sbjct: 131 MRR 133


>gi|152998036|ref|YP_001342871.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150838960|gb|ABR72936.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 268

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 106/218 (48%), Gaps = 8/218 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLI 238
                F+ +  LG++++L      R       F+ +  + +P+L +  ++ F       +
Sbjct: 51  VTFTAFILASFLGLLIALAGFSRHRILREFARFYVEVFRGIPVLVLLFYIAFVGA--PEM 108

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y      P+   +     +          IAL+   +AFIAE+ R+G+  V +GQ+E
Sbjct: 109 VKLYNWALQIPIEAGWIEEARTRDFTLLWRAIIALAISYSAFIAEVFRAGIQEVGKGQIE 168

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL++    RL+ LPQAMR I+PPL +  + ++K+S+L   +G  D+  +G    +
Sbjct: 169 AAKALGLSNWHRFRLITLPQAMRKILPPLGNDLVAMIKDSALVSVLGVQDITQLGKVFSS 228

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            T Q  E   +  F+YL L++ ++L +    A +   +
Sbjct: 229 STFQFFETYNVVAFMYLVLTLSLSLMIRAFEAHLRRND 266



 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 3/125 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +   +V   S    A A+  G + T  + F+  I A+ +G L+     S ++++    R 
Sbjct: 24  LLWNMVADESYQRIAGALSEGLLTTIGVTFTAFILASFLGLLIALAGFSRHRILREFARF 83

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           YVEVFR IP LV++F++        P           + +    +        T     +
Sbjct: 84  YVEVFRGIPVLVLLFYIAFVG---APEMVKLYNWALQIPIEAGWIEEARTRDFTLLWRAI 140

Query: 192 FSFVL 196
            +  +
Sbjct: 141 IALAI 145


>gi|322832387|ref|YP_004212414.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167588|gb|ADW73287.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 237

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 9/219 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +F  +F  G +++L  T  S  F    G  L LL  S F        VL      L
Sbjct: 6   VWQYLFSPAFFQGALMTLLLTVCSLFFGIIAGLVLALLQESRFRAGS----VLAFFYLWL 61

Query: 245 HFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               PVL Q  F+             F    +ALS    A++AEI+RSGL AV  GQ  A
Sbjct: 62  FRGTPVLFQIIFVYNVLPTFGLRFSAFTCAVMALSLNEGAYMAEILRSGLQAVRSGQRTA 121

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +ALG+T  +  R ++LPQA R ++PP+ +Q +++LK+S+L   +   +L+ +     + 
Sbjct: 122 GMALGMTQSQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIAVQELLLIANQTASA 181

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +  E +      YL L+ +  +    L   +  K++K
Sbjct: 182 SFRYFEALCAAGIYYLVLTSVFMVGQAWLERSLDPKKRK 220



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 33/100 (33%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A   G + T  L    +    I G ++   + S  +  + +   Y+ +FR  P L  I F
Sbjct: 14  AFFQGALMTLLLTVCSLFFGIIAGLVLALLQESRFRAGSVLAFFYLWLFRGTPVLFQIIF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +Y  + +              + LN        L     A
Sbjct: 74  VYNVLPTFGLRFSAFTCAVMALSLNEGAYMAEILRSGLQA 113


>gi|311031433|ref|ZP_07709523.1| amino acid ABC transporter ATP-binding protein [Bacillus sp. m3-13]
          Length = 220

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 20/240 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +P  +  +       +  L     T+   A   V S  +G+  +       +    K  +
Sbjct: 1   MPSLAHFIDVFFSSYDMFLRGMLKTLQITAISIVISLFVGLFFAFL-----KISKIKVLE 55

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +   YI  +L+ G P +V I + Y       +               F S+ +AL+ + 
Sbjct: 56  WIANTYI--YLVRGTPLIVQIFVFYYGLVQMGI-------------TAFWSVTLALAFHN 100

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+IAEI R  + ++ +GQMEA  +LG+T   A R ++LPQA R  +PPL +Q++  LK+
Sbjct: 101 GAYIAEIFRGTIQSIDKGQMEAGRSLGMTRNLAMRRIILPQAFRRALPPLGNQFIICLKD 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SSLA  +GF +L +V  T    +   +  +L+    YL L  +I +F+N L  K +  ++
Sbjct: 161 SSLAAFIGFYELFNVAQTQGANSFDYMTYLLVVSVYYLFLVGLIGIFVNLLERKFSASDR 220



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 3/158 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G + T  +    ++ +  +G      ++S  K++ WI   Y+ + R  P +V IF  
Sbjct: 18  FLRGMLKTLQITAISIVISLFVGLFFAFLKISKIKVLEWIANTYIYLVRGTPLIVQIFVF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLSLFATRL 207
           Y  ++ +      S+ L                T+ +  K        LG+  +L   R+
Sbjct: 78  YYGLVQMGITAFWSVTLALAFHNGAYIAEIFRGTIQSIDKGQMEAGRSLGMTRNLAMRRI 137

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                +   +ALP L     +     +L      Y+L 
Sbjct: 138 --ILPQAFRRALPPLGNQFIICLKDSSLAAFIGFYELF 173


>gi|317152558|ref|YP_004120606.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316942809|gb|ADU61860.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 218

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 15/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +  + L +         K+     +LG+ L L  T   R    +        YI
Sbjct: 1   MYFDIAVLPKYLPYFIPAAWMTLKVSALGILLGVCLGL-GTAFMRISPRRVLHLPARAYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +L+ G P L+ +   Y        L                S  +AL  +  A+IAEI
Sbjct: 60  --YLVRGTPLLLQLLFIYFGLRSLAGL------------SALTSAVLALGIHNGAYIAEI 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++  GQMEAA +LG+ + +A   ++LPQA++  +P L +Q++  LK+SSLA  +
Sbjct: 106 FRGAIVSISNGQMEAARSLGMPYPRAMLRIILPQALKRAVPSLGNQFIIALKDSSLASTI 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L+     + +     +E++ I    YL  + + +    RL +++ +  +
Sbjct: 166 TINELLLKSQQLASSNFMMMEMLFIAALFYLFYTAIFSWLFRRLESRLDVSTQ 218



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 29/68 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    +     T  ++  G++    +G      R+S  +++    R Y+ + R  P L+ 
Sbjct: 11  YLPYFIPAAWMTLKVSALGILLGVCLGLGTAFMRISPRRVLHLPARAYIYLVRGTPLLLQ 70

Query: 145 IFFLYKSV 152
           + F+Y  +
Sbjct: 71  LLFIYFGL 78


>gi|163841375|ref|YP_001625780.1| amino acid ABC transporter permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954851|gb|ABY24366.1| amino acid ABC transporter permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 298

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 8/239 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    + +             +     + V S VL IVL++      R       + +  
Sbjct: 41  NENFRWYIVWLYLRDVKVIQGVGWTLVLTVASMVLAIVLAILL-AFMRQSDNPIFRWVSW 99

Query: 222 LYISTFLIFGLPT-LVLIALKYQLH----FDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            ++  F    + T LV       L+       P   +F       V   F++  + L   
Sbjct: 100 FWVWFFRGTPVYTQLVFWGAIAVLYPKIVIGIPWGPEFLSYNTQDVINFFVASILGLGLN 159

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AEI R+GL +V +GQ+EAA ALG+   K  R ++LPQAMR I+PP  ++ + +LK
Sbjct: 160 ESAYLAEIFRAGLKSVDKGQIEAADALGIRKSKILRRIVLPQAMRVIVPPTGNETIGMLK 219

Query: 337 NSSLAVAVGFA--DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +SL VAV F   +L      + N+T   I  +LI  F YL ++ ++ +    +     
Sbjct: 220 TTSLVVAVPFLFGELTFATTALANKTFLPIPFLLIAAFWYLLITSIMMVGQYYIERHYG 278



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 34/100 (34%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L  + M+ A ++  L+   R S N +  W+   +V  FR  P    + F  
Sbjct: 59  IQGVGWTLVLTVASMVLAIVLAILLAFMRQSDNPIFRWVSWFWVWFFRGTPVYTQLVFWG 118

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
              +    I       P  +  N + +    +       +
Sbjct: 119 AIAVLYPKIVIGIPWGPEFLSYNTQDVINFFVASILGLGL 158


>gi|26249862|ref|NP_755902.1| amino-acid ABC transporter permease YhdY [Escherichia coli CFT073]
 gi|26110290|gb|AAN82476.1|AE016767_236 Hypothetical amino-acid ABC transporter permease protein yhdY
           [Escherichia coli CFT073]
          Length = 368

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPYRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV++PQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|312958425|ref|ZP_07772945.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311286968|gb|EFQ65529.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 229

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   + +LG++L++    ++R       ++LP  YI  F   G P 
Sbjct: 9   WLPKFIQGAILTLELVGIAVILGLILAIPLG-IARSSKRWYVRSLPYAYIFFF--RGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAFIAEIVRSGLI 290
           LV + L Y        L QF+ I  S +       F      ++ +TAA+IAEI+R  + 
Sbjct: 66  LVQLFLVYY------GLAQFDSIRSSFMWTYLRDPFWCAPATMTLHTAAYIAEILRGAIQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P G++EAA ALG++  K    ++LP+A R  +P  +++ + +LK SSLA  V   +L 
Sbjct: 120 AIPPGEIEAARALGMSRPKTLLYIILPRAARIGLPAYSNEVILMLKASSLASTVTLLELT 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +    +E+       YL +S ++      L   + +
Sbjct: 180 GMARTIIARNYLTVEMFFTAGVFYLLISYLLVQGFKLLERWLRV 223



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    + G + T  L    +I   I+   +G  R S    V  +   Y+  FR  P LV 
Sbjct: 9   WLPKFIQGAILTLELVGIAVILGLILAIPLGIARSSKRWYVRSLPYAYIFFFRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +F +Y  +     I    +   
Sbjct: 69  LFLVYYGLAQFDSIRSSFMWTY 90


>gi|301028302|ref|ZP_07191562.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|299878645|gb|EFI86856.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 125 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEEYVFAALIYWIFCFSMSRYSQYLEKRFNTGR 364


>gi|260891036|ref|ZP_05902299.1| polar amino acid uptake family ABC transporter, permease protein
           [Leptotrichia hofstadii F0254]
 gi|260859063|gb|EEX73563.1| polar amino acid uptake family ABC transporter, permease protein
           [Leptotrichia hofstadii F0254]
          Length = 237

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 9/234 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              F +      L    +T++      +FS +L   ++L           K      L  
Sbjct: 9   NWGFMVRAIPEILKALPMTLNIAIVTMIFSLILSFFIALVRI-------NKIPVLTRLAT 61

Query: 224 ISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           I    I G P LV I L Y         +  ++ F       P  + +Y+A     + ++
Sbjct: 62  IYVSFIRGTPLLVQIYLAYYGLPKILDYIHLKYGFNIDVNNIPAIVFVYVAFILNVSGYL 121

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E  R+ + +V +GQ+EAA+++G+T  +A R ++LPQA+    P   + +++L+K+SSLA
Sbjct: 122 SETFRAAIQSVDKGQVEAALSIGMTKWQAMRRIVLPQAIIITFPNFGNTFISLIKDSSLA 181

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             V   +++     I        E  ++   IY  + I++   M  +  K+ + 
Sbjct: 182 FTVSIVEMMGKAKIISASGLDIFEAYIVVAGIYWVVCIIVEKVMGIVEKKLRVG 235



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  +A   MI + I+   +   R++   ++  +  +YV   R  P LV I+  
Sbjct: 20  ILKALPMTLNIAIVTMIFSLILSFFIALVRINKIPVLTRLATIYVSFIRGTPLLVQIYLA 79

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 80  YYGLPKI 86


>gi|15800617|ref|NP_286631.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 EDL933]
 gi|15830199|ref|NP_308972.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750051|ref|ZP_02775073.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4113]
 gi|168756661|ref|ZP_02781668.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4401]
 gi|168763283|ref|ZP_02788290.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767377|ref|ZP_02792384.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4486]
 gi|168776408|ref|ZP_02801415.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4196]
 gi|168779419|ref|ZP_02804426.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787088|ref|ZP_02812095.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC869]
 gi|168799851|ref|ZP_02824858.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC508]
 gi|195936911|ref|ZP_03082293.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. EC4024]
 gi|208805959|ref|ZP_03248296.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815342|ref|ZP_03256521.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822579|ref|ZP_03262898.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398007|ref|YP_002269535.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4115]
 gi|217326489|ref|ZP_03442573.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. TW14588]
 gi|254792061|ref|YP_003076898.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. TW14359]
 gi|261225516|ref|ZP_05939797.1| arginine transporter subunit; membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258515|ref|ZP_05951048.1| arginine transporter subunit; membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK966]
 gi|291281864|ref|YP_003498682.1| Arginine ABC transporter permease protein ArtQ [Escherichia coli
           O55:H7 str. CB9615]
 gi|12513883|gb|AAG55241.1|AE005267_6 arginine 3rd transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13360404|dbj|BAB34368.1| arginine 3rd transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187768204|gb|EDU32048.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4196]
 gi|188015744|gb|EDU53866.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4113]
 gi|189002709|gb|EDU71695.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4076]
 gi|189356305|gb|EDU74724.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363468|gb|EDU81887.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4486]
 gi|189366539|gb|EDU84955.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4501]
 gi|189372987|gb|EDU91403.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC869]
 gi|189377763|gb|EDU96179.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC508]
 gi|208725760|gb|EDZ75361.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208731990|gb|EDZ80678.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738064|gb|EDZ85747.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209159407|gb|ACI36840.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC4115]
 gi|209775308|gb|ACI85966.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775310|gb|ACI85967.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775312|gb|ACI85968.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775314|gb|ACI85969.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775316|gb|ACI85970.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|217322710|gb|EEC31134.1| arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. TW14588]
 gi|254591461|gb|ACT70822.1| arginine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|290761737|gb|ADD55698.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O55:H7 str. CB9615]
 gi|320192653|gb|EFW67294.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. EC1212]
 gi|320637732|gb|EFX07524.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. G5101]
 gi|320642855|gb|EFX12056.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H- str. 493-89]
 gi|320648312|gb|EFX16967.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H- str. H 2687]
 gi|320654150|gb|EFX22218.1| arginine transporter permease subunit ArtQ [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320659774|gb|EFX27330.1| arginine transporter permease subunit ArtQ [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320664244|gb|EFX31395.1| arginine transporter permease subunit ArtQ [Escherichia coli
           O157:H7 str. LSU-61]
 gi|326338244|gb|EGD62073.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. 1125]
 gi|326346221|gb|EGD69959.1| Arginine ABC transporter, permease protein ArtQ [Escherichia coli
           O157:H7 str. 1044]
          Length = 238

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGIVEIPVQMQIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 MGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|84494729|ref|ZP_00993848.1| putative ABC transporter permease protein [Janibacter sp. HTCC2649]
 gi|84384222|gb|EAQ00102.1| putative ABC transporter permease protein [Janibacter sp. HTCC2649]
          Length = 274

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 20/268 (7%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +   +    + V   L  +                         +    T+   A  F+ 
Sbjct: 23  IRWVQYALLIAVALVLVFAANWTQIQQVFFRSDMVKATFTEGLPNAFKNTLVYTAGAFII 82

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             +LG VL+L      R       + L  ++I  F   GLP +V+        F    L 
Sbjct: 83  GLLLGTVLALM-----RLSSVGPYRWLATVWIEFF--RGLPAIVV--------FIAFGLL 127

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F G       + +++IAL    +A++AE +R+G+ AVP GQ+EAA +LG+    ATR
Sbjct: 128 PLAFSGLVIPFDPYGTVWIALGLVASAYMAETIRAGIQAVPPGQIEAARSLGMPAGVATR 187

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIIL 368
            ++LPQA R I PPLT++ + L+K+SSL   +G +    +L   G  + N     +  ++
Sbjct: 188 KIVLPQAFRVITPPLTNEIILLVKDSSLVYVLGLSTTGYELTKYGRDLANTNAN-LTPLV 246

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  F YL +++ +++ + R+ A+   + 
Sbjct: 247 VAGFCYLVITLPLSILVRRMEARQKKER 274



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           F NT        I   ++GT++   RLS+     W+  V++E FR +P +VV     
Sbjct: 69  FKNTLVYTAGAFIIGLLLGTVLALMRLSSVGPYRWLATVWIEFFRGLPAIVVFIAFG 125


>gi|295102636|emb|CBL00181.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Faecalibacterium prausnitzii L2-6]
          Length = 227

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF L +VL++ A  L ++        L   YI  ++I G P LV + + +  
Sbjct: 28  MTIPLTLVSFTLAMVLAV-AVALVQYAKVPVLSQLARFYI--WVIRGTPLLVQLFIIFY- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                            +   F +  IA +    A+ AE +R  L +VP+GQ+EA   +G
Sbjct: 84  ----------GLPSAGIMLNAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGCCVG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R ++LPQA+R+ +P L++  + ++K++SLA  +  A+L   G  +  +T   +
Sbjct: 134 MSWWQIMRRIVLPQALRTAVPALSNSLIGMVKDTSLASNITVAELFMAGQRVAARTYIFL 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I      +YL    +I      L  ++
Sbjct: 194 PIYCEVAVVYLLFCTVITKLQGLLERQL 221



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  G   T  L       A ++   V   + +   +++ + R Y+ V R  P LV +F
Sbjct: 20  RILSAGLTMTIPLTLVSFTLAMVLAVAVALVQYAKVPVLSQLARFYIWVIRGTPLLVQLF 79

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            ++  + S   + +           N       T+     +
Sbjct: 80  IIFYGLPSAGIMLNAFPAAVIAFAFNEGAYCAETMRGALES 120


>gi|306816386|ref|ZP_07450518.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|222034986|emb|CAP77729.1| Inner membrane amino-acid ABC transporter permease [Escherichia
           coli LF82]
 gi|305849951|gb|EFM50410.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily protein [Escherichia coli NC101]
 gi|312947828|gb|ADR28655.1| amino-acid transporter subunit; membrane component of ABC
           superfamily protein [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFIYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|209920743|ref|YP_002294827.1| amino acid ABC transporter permease [Escherichia coli SE11]
 gi|209914002|dbj|BAG79076.1| amino acid ABC transporter permease component [Escherichia coli
           SE11]
          Length = 368

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|149191817|ref|ZP_01870054.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148834335|gb|EDL51335.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 227

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T A +   + V+G+ +++    ++R+            +I  F   G P L
Sbjct: 10  FPVYLDGLWTTAWLVSLALVIGLCVAIPL-AVARNSTNYLFSLPSWGFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  K  R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSPWKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+ L+ +I     +   + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMGLTFIILWVFKKAEKRF 217



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 35/103 (33%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++    +   +   R S N L +     ++  FR  P LV ++ 
Sbjct: 12  VYLDGLWTTAWLVSLALVIGLCVAIPLAVARNSTNYLFSLPSWGFIYFFRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +Y  +    P+ D      +   L    L+    T +      
Sbjct: 72  IYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAI 114


>gi|29832943|ref|NP_827577.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29610064|dbj|BAC74112.1| putative polar amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 277

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 20/252 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           VI F   +    L        L   MF +   L+     + T +  FV   VLG+V++L 
Sbjct: 36  VIAFAVLADWGQLKNQFAQWDLVKQMFPDVITLALKNTVLYTMSG-FVVGLVLGMVIALM 94

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       + L  +YI  F       L+ + +   +    P        G     
Sbjct: 95  -----RLSSVGPYRWLAGIYIEIFRGLPA-LLIFVFVGVAVPLAFP--------GTEIPG 140

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             +  + +AL   +AA++AE +R+G+ AVP+GQMEAA +LG +H +A   +++PQA R +
Sbjct: 141 GTYGKVALALGLVSAAYMAETIRAGIQAVPKGQMEAARSLGFSHARAMVSIIIPQAFRIV 200

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           IPPLT++ + L K+SSL + +G      +L   G  + +QT  +  I L+    YL +++
Sbjct: 201 IPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASQTANSTPI-LVAGLCYLLVTV 259

Query: 380 MIALFMNRLNAK 391
            +   + RL AK
Sbjct: 260 PLGFVVRRLEAK 271



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 35/71 (49%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             I +   NT     SG +   ++G ++   RLS+     W+  +Y+E+FR +P L++  
Sbjct: 64  DVITLALKNTVLYTMSGFVVGLVLGMVIALMRLSSVGPYRWLAGIYIEIFRGLPALLIFV 123

Query: 147 FLYKSVLSVLP 157
           F+  +V    P
Sbjct: 124 FVGVAVPLAFP 134


>gi|197303849|ref|ZP_03168885.1| hypothetical protein RUMLAC_02588 [Ruminococcus lactaris ATCC
           29176]
 gi|197297142|gb|EDY31706.1| hypothetical protein RUMLAC_02588 [Ruminococcus lactaris ATCC
           29176]
          Length = 236

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 102/227 (44%), Gaps = 12/227 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L     T+       +   V+G +++            K    +   Y++ F   G
Sbjct: 21  YVKVLQGLQNTLMIAICGLIIGIVIGTLIATVRVIPKYKTLPKVLNHICSFYVALF--RG 78

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V + + Y +                          +     + A+I+EI+RSG+ +
Sbjct: 79  TPMVVQLLVFYYVLLPI----------IGVKITGVQVAMVVFGLNSGAYISEIMRSGIQS 128

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEA  A+GL+   +   +++PQA+++I+P L +++++L+K +S+   VG ADL  
Sbjct: 129 VDPGQMEAGRAVGLSFGTSMTKIVIPQAVKNILPTLGNEFISLVKETSVVSFVGAADLYV 188

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I + + + +   L+   IY++L ++I L +  L   +   +++
Sbjct: 189 AFNYIGSNSYEFMVPYLVMALIYIALVLIITLLVKILERSLKKSDRR 235



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRNIPPLVV 144
           L G  NT  +A  G+I   +IGTL+   R+        K++  IC  YV +FR  P +V 
Sbjct: 25  LQGLQNTLMIAICGLIIGIVIGTLIATVRVIPKYKTLPKVLNHICSFYVALFRGTPMVVQ 84

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMF 170
           +   Y  +L ++ +    + +   +F
Sbjct: 85  LLVFYYVLLPIIGVKITGVQVAMVVF 110


>gi|293416695|ref|ZP_06659334.1| inner membrane amino-acid ABC transporter permease yhdY
           [Escherichia coli B185]
 gi|331654869|ref|ZP_08355869.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli M718]
 gi|291432051|gb|EFF05034.1| inner membrane amino-acid ABC transporter permease yhdY
           [Escherichia coli B185]
 gi|331048251|gb|EGI20328.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli M718]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 125 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|261210505|ref|ZP_05924798.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260840290|gb|EEX66861.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 225

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 98/217 (45%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   S V+G++ ++    ++R+  ++        YI    + G P L
Sbjct: 10  LPVYLSGLWTTVWLVSLSLVIGLMWAIPL-AIARNSKQQWLSYPAWGYIYF--LRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  + G+     +    +A    T+A+ AEIVR  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKGTLWEHAWFCALVAFILNTSAYTAEIVRGAMNGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSSWQTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+SL+ +I     +   + 
Sbjct: 181 VNSRYYAPFEAFLSAGLFYMSLTFIILWCFKQAEKRF 217



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 34/103 (33%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++   +    +   R S  + +++    Y+   R  P LV ++ 
Sbjct: 12  VYLSGLWTTVWLVSLSLVIGLMWAIPLAIARNSKQQWLSYPAWGYIYFLRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +Y  +    P+        +   L    L+    T +      
Sbjct: 72  IYYGMDQFFPVKGTLWEHAWFCALVAFILNTSAYTAEIVRGAM 114


>gi|194467496|ref|ZP_03073483.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|194454532|gb|EDX43429.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
          Length = 487

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T++      +F+ + G++L +     ++  +           +S+ LI+ 
Sbjct: 283 YPALLRGLWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANA----------VSSTLIYI 332

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              + +I L + ++   P     N IG     P F++  + L+    A+I  IV+ G  +
Sbjct: 333 FRGIPMIVLAFFIYMGIP-----NVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFES 385

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  +L  
Sbjct: 386 VNIGQWEAARSLGLPYSKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQ 445

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II+Q  +  ++ LI   +Y+ +  ++    N +  ++ 
Sbjct: 446 TGTVIISQNMEGFKMWLIIGTMYIIIITLLTWLSNYVQKRMG 487



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L   G+I A I G ++G   ++ NK    +    + +FR IP +V+ FF
Sbjct: 285 ALLRGLWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFF 344

Query: 148 LYKSVLSVLPI 158
           +Y  + +V+  
Sbjct: 345 IYMGIPNVIGH 355


>gi|20502717|gb|AAM22578.1|AF375657_15 AotM [Aeromonas hydrophila]
          Length = 230

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 5/216 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   S +LG++L++    L R+      K     YI  F   G P L
Sbjct: 10  WPTYWQGLYTTVLLVAASLILGLMLAVPLGIL-RNSRNWLIKGPIWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y        L   N +     +  +    +A +  T A+ AEIVR  ++ +P+G
Sbjct: 67  VQLFIIYYGAAQWEWLK--NSVAWDLFAEAWFCALLAFTLNTGAYTAEIVRGAVLNMPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA A G+T  +    ++LP + R  +P  +++ + +L+ S++A  +   DL      
Sbjct: 125 QIEAANAFGMTRWQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARI 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I ++     E  L    +Y+ L+ +I     +  A+
Sbjct: 185 INSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWEAR 220



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 36/105 (34%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 G   T  L  + +I   ++   +G  R S N L+      Y+  FR  P LV +
Sbjct: 10  WPTYWQGLYTTVLLVAASLILGLMLAVPLGILRNSRNWLIKGPIWAYIYFFRGTPLLVQL 69

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           F +Y        + +      F        L+F   T    A+I 
Sbjct: 70  FIIYYGAAQWEWLKNSVAWDLFAEAWFCALLAFTLNTGAYTAEIV 114


>gi|302538462|ref|ZP_07290804.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
 gi|302447357|gb|EFL19173.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
          Length = 276

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 19/209 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              F+F  VLG+V++L      R       + +  +YI  F       L+ I +   +  
Sbjct: 78  LSGFLFGLVLGLVIALM-----RLSSVAPYRWVASVYIELFRGLPA-LLIFIFVGVAVPL 131

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P        G +     +  + + L    AA++AE +R+G+ AVP+GQMEAA +LG +
Sbjct: 132 AFP--------GTAIPGGTYGKVALGLGLVAAAYMAETIRAGIQAVPKGQMEAARSLGFS 183

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   V++PQA R +IPPLT++ + L K+SSL + +G      +L   G  + ++T  
Sbjct: 184 HGRAMVSVVIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASETAN 243

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  I L+    YL +++ ++  + RL A+
Sbjct: 244 STPI-LVAGLCYLLVTVPLSFVVRRLEAR 271



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +   NT     SG +   ++G ++   RLS+     W+  VY+E+FR +P L++  F+
Sbjct: 66  ITIALRNTVVYTLSGFLFGLVLGLVIALMRLSSVAPYRWVASVYIELFRGLPALLIFIFV 125

Query: 149 YKSVLSVLP 157
             +V    P
Sbjct: 126 GVAVPLAFP 134


>gi|227530174|ref|ZP_03960223.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227349927|gb|EEJ40218.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 212

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  LS    T+  +    V S ++G   +L           +  + +  +Y+  F   
Sbjct: 8   QWHPLLSGLWNTILCSLIALVGSLIIGTFFALLE-----ISKYRIVRLIGSIYVEVFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L++IA+ + L     +          T    F +  I L+ YT+AFIAE VR+G+ 
Sbjct: 63  P---LLVIAMGFFLIIPMYI----------TKISGFAAGTIGLTLYTSAFIAETVRAGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  GQ+E A+A GLTH +A R ++LPQA R +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 SVEGGQLEGALANGLTHGQAMRYIILPQAFRVVIPPLGNQFINLVKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  I N T Q +    I   +YL +++ ++ +M  L  K+A
Sbjct: 170 YEGNLIANDTLQTMPTYFIVGVLYLIITLPLSYYMRHLEKKLA 212



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT   +   ++ + IIGT      +S  ++V  I  +YVEVFRNIP LV+    
Sbjct: 12  LLSGLWNTILCSLIALVGSLIIGTFFALLEISKYRIVRLIGSIYVEVFRNIPLLVIAMGF 71

Query: 149 YKSVL 153
           +  + 
Sbjct: 72  FLIIP 76


>gi|73748260|ref|YP_307499.1| amino acid ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|289432311|ref|YP_003462184.1| polar amino acid ABC transporter inner membrane protein
           [Dehalococcoides sp. GT]
 gi|73659976|emb|CAI82583.1| amino acid ABC transporter, permease protein [Dehalococcoides sp.
           CBDB1]
 gi|288946031|gb|ADC73728.1| polar amino acid ABC transporter, inner membrane subunit
           [Dehalococcoides sp. GT]
          Length = 273

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             R    F+ +  + +PLL    +  F  P ++   +   L+F   +  Q N I      
Sbjct: 91  LIRGIATFYVEIVRGIPLLVQLIWWYFAFPVIIQ-TIGQALNFGPMLNYQANPI------ 143

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              +     ++    A+++EI R+G+ ++P+GQMEAA +LG++H +A R ++LPQA+R +
Sbjct: 144 ---VMAIWGMTFCYGAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFIILPQALRVV 200

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP+ +++++LLK++SL   V  AD+V +G          IE+  +   +YL L+++ + 
Sbjct: 201 LPPMGNEFISLLKDTSLVSTVAVADMVRLGREFTATNFNPIEVWSMIALLYLILTLLSSR 260

Query: 384 FMNRLNAKIALKE 396
            +N +  K A   
Sbjct: 261 LINYIEKKTAFSR 273



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 2/119 (1%)

Query: 70  FEIDQGIVPYTSDS--SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           F +  G++ +  D        + VG   T  +A        I+G   G GRLS N L+  
Sbjct: 35  FALAGGLMLFQPDPFLDIFKYVWVGIGITVLVAVVSYFLMLILGLFGGLGRLSQNTLIRG 94

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           I   YVE+ R IP LV + + Y +   ++     ++     +      +      M   
Sbjct: 95  IATFYVEIVRGIPLLVQLIWWYFAFPVIIQTIGQALNFGPMLNYQANPIVMAIWGMTFC 153


>gi|219670551|ref|YP_002460986.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219540811|gb|ACL22550.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 219

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 10/228 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M    + L           K+F  + V+ + L L    L R       ++   +YI  F 
Sbjct: 1   MDYILQILGPMLNGTAVTLKMFFVTIVMSVPLGLML-SLGRISRFGVLRSAIGVYIWVF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P ++ +   Y   F  P +     IG   +  +F +  +A     AA+ AEI R+G
Sbjct: 59  -RGTPLMLQLLFVY---FGLPFI---PVIGEILILTDFQAAILAFVLNYAAYFAEIFRAG 111

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ RGQ E A ALG+T+ +  R ++LPQ ++ ++PP++++ + L+K++SL   +   D
Sbjct: 112 IQSIERGQYEGARALGMTYGQLMRRIILPQVVKRVLPPVSNETITLVKDTSLIYVLAMND 171

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+     ++ +    +   ++    YL +++++     RL  + A  +
Sbjct: 172 LLRTTRALVQRDF-TMTPFIVAGVFYLLMTLVLTWGFQRLEKRYAAYD 218



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 39/79 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  ++ +  +G ++  GR+S   ++     VY+ VFR  P ++ + F+
Sbjct: 11  MLNGTAVTLKMFFVTIVMSVPLGLMLSLGRISRFGVLRSAIGVYIWVFRGTPLMLQLLFV 70

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           Y  +  +  I +  I+  F
Sbjct: 71  YFGLPFIPVIGEILILTDF 89


>gi|317047473|ref|YP_004115121.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949090|gb|ADU68565.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 242

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F+ +F+ G +L+L    L R    +        YI  F   G P L+ + L Y 
Sbjct: 19  PVTLGLFISAFLCGGLLALGILTL-RMSRWRVLSGFARGYILVF--RGSPLLIQLFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S V P     F+   +ALS  TAA+ AEI+R  L+AVP GQ+EA
Sbjct: 76  ------GLGQFGVIRHSFVWPFLREPFICAVLALSLCTAAYTAEILRGALLAVPPGQVEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GLACGMSRGLLLRRIIAPIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T + +E+ L    IYL L+ +I      L  ++    +
Sbjct: 190 TYRTMEVFLCAAAIYLILNFIIVQLYALLERRLTPVHR 227


>gi|283832471|ref|ZP_06352212.1| arginine ABC transporter, permease protein ArtQ [Citrobacter
           youngae ATCC 29220]
 gi|291072130|gb|EFE10239.1| arginine ABC transporter, permease protein ArtQ [Citrobacter
           youngae ATCC 29220]
          Length = 238

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIIGLALAMFFAVWESVKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L +A  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLADGFTINLGFVDIPVQMQIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 LGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLRATRFERR 236


>gi|89110030|ref|AP_003810.1| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|90111567|ref|NP_417736.2| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|170082798|ref|YP_001732118.1| amino-acid ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188494363|ref|ZP_03001633.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 53638]
 gi|238902368|ref|YP_002928164.1| putative amino-acid transporter subunit [Escherichia coli BW2952]
 gi|254038436|ref|ZP_04872494.1| inner membrane amino-acid ABC transporter permease yhdY
           [Escherichia sp. 1_1_43]
 gi|256024156|ref|ZP_05438021.1| putative amino-acid transporter subunit [Escherichia sp. 4_1_40B]
 gi|307139958|ref|ZP_07499314.1| putative amino-acid transporter subunit [Escherichia coli H736]
 gi|331643970|ref|ZP_08345101.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli H736]
 gi|3916018|sp|P45768|YHDY_ECOLI RecName: Full=Inner membrane amino-acid ABC transporter permease
           protein yhdY
 gi|85676061|dbj|BAE77311.1| predicted amino-acid transporter subunit [Escherichia coli str. K12
           substr. W3110]
 gi|87082239|gb|AAC76302.2| predicted amino-acid transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|169890633|gb|ACB04340.1| predicted amino-acid transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|188489562|gb|EDU64665.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli 53638]
 gi|226840060|gb|EEH72081.1| inner membrane amino-acid ABC transporter permease yhdY
           [Escherichia sp. 1_1_43]
 gi|238862153|gb|ACR64151.1| predicted amino-acid transporter subunit [Escherichia coli BW2952]
 gi|260447704|gb|ACX38126.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|309703689|emb|CBJ03030.1| ABC transporter, permease protein [Escherichia coli ETEC H10407]
 gi|315137853|dbj|BAJ45012.1| putative amino-acid transporter subunit [Escherichia coli DH1]
 gi|323936246|gb|EGB32538.1| inner membrane transport system [Escherichia coli E1520]
 gi|331037441|gb|EGI09665.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli H736]
          Length = 367

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 125 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGR 364


>gi|238922609|ref|YP_002936122.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Eubacterium
           rectale ATCC 33656]
 gi|238874281|gb|ACR73988.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain protein [Eubacterium
           rectale ATCC 33656]
          Length = 252

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 100/248 (40%), Gaps = 19/248 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR----- 206
           ++   P      ++      ++  +    LT+  +    +  FVLG ++ +         
Sbjct: 1   MMISNPSNSLEWMVFLAQKYSSMFIKGTWLTLYISVVGTLLGFVLGYIVGIVNDVKLNDG 60

Query: 207 --LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             + +    +  K +  +Y+  F     P +V   + Y              +G   ++P
Sbjct: 61  DNIVKKVLIRIVKVIFTVYVEVF--RDTPMIVQAMIVYY---------GIRQMGYENLTP 109

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  +     T A++ E VR+G+ ++  GQ E A A+G++  K    V+LPQA ++II
Sbjct: 110 VF-AGILVTVLNTGAYMGETVRAGIGSIDMGQREGAWAMGMSPFKTMLYVVLPQAFKNII 168

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + + +L  LK +S+   +   +L     T+     +  E  L+   IY  L  +    
Sbjct: 169 PEMANTFLLNLKMTSVLNVIAVQELFMAAKTVGGNYYKYFESYLVIAVIYFVLCFVFDKL 228

Query: 385 MNRLNAKI 392
              +  K+
Sbjct: 229 FKLIEKKL 236



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 12/80 (15%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA------------NKLVAWICRVY 132
           Y++  + G   T +++  G +   ++G +VG                   ++V  I  VY
Sbjct: 20  YSSMFIKGTWLTLYISVVGTLLGFVLGYIVGIVNDVKLNDGDNIVKKVLIRIVKVIFTVY 79

Query: 133 VEVFRNIPPLVVIFFLYKSV 152
           VEVFR+ P +V    +Y  +
Sbjct: 80  VEVFRDTPMIVQAMIVYYGI 99


>gi|91784416|ref|YP_559622.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91688370|gb|ABE31570.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 313

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 99/261 (37%), Gaps = 7/261 (2%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
                L   V+  + +   +    + +  +          +     + V S  LG+   +
Sbjct: 53  FWYAMLLVVVVLFVELVIDNPRWQWDIVAHYLFNKRVMKGLGNTLILTVLSSALGLCFGV 112

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ------FNF 256
                 R       +A   +YI          ++L          +  L           
Sbjct: 113 LIAA-CRMADNAVLRAAGYVYIWIIRATPPLAMLLFLFFLSALIPRLYLPLPLLHANLFD 171

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           I  + +   F    I L+ Y   + AEI R G+ AV RGQ EA  A+G++  +    V++
Sbjct: 172 IDTNQIISRFSVAVIGLAMYLGGYSAEIFRGGVSAVDRGQREACKAIGMSDFRTMWHVVM 231

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R IIPPL ++ + + KN+SL   +G+ +L++    I     + I ++ +    YL 
Sbjct: 232 PQAVRIIIPPLANELITMFKNTSLVTVIGYVELLTTVQLIYATNFETIPLLTVACIWYLV 291

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           L+ +     + L        +
Sbjct: 292 LTSLAMAAQSLLERHFRKGVR 312



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 4/108 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G  NT  L           G L+ A R++ N ++     VY+ + R  PP      + 
Sbjct: 90  MKGLGNTLILTVLSSALGLCFGVLIAACRMADNAVLRAAGYVYIWIIRATPP----LAML 145

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             +  +  +     +    +  N   +    +    +  +   +  LG
Sbjct: 146 LFLFFLSALIPRLYLPLPLLHANLFDIDTNQIISRFSVAVIGLAMYLG 193


>gi|16077406|ref|NP_388219.1| ABC transporter permease [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221308149|ref|ZP_03589996.1| hypothetical protein Bsubs1_01883 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312474|ref|ZP_03594279.1| hypothetical protein BsubsN3_01891 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317407|ref|ZP_03598701.1| hypothetical protein BsubsJ_01878 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321670|ref|ZP_03602964.1| hypothetical protein BsubsS_01909 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314008|ref|YP_004206295.1| putative ABC transporter permease [Bacillus subtilis BSn5]
 gi|1175692|sp|P42399|YCKA_BACSU RecName: Full=Probable amino-acid ABC transporter permease protein
           yckA
 gi|710628|dbj|BAA06425.1| homologue of glutamine permease of H. influenzae [Bacillus
           subtilis]
 gi|1805409|dbj|BAA08971.1| yckA [Bacillus subtilis]
 gi|2632623|emb|CAB12131.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320020282|gb|ADV95268.1| putative ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 226

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 14/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   L      +    +     I   S   G V+ LF   L+R       +    
Sbjct: 6   QWEYIFNTKLAIESFPYVIKGIGYTLLISFVSMFAGTVIGLFI-SLARMSKLALLRWPAK 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G+P LV++ + Y           F F           +  I  S  +AA+I
Sbjct: 65  LYISF--MRGVPILVILFILY-----------FGFPYIGIEFSAVTAALIGFSLNSAAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RS + +V +GQ EAA +LGL++ +  R ++LPQ++R  +PPL +  L+L+K SSLA
Sbjct: 112 AEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIRIALPPLANVLLDLIKASSLA 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+     I  +    + + ++   IY ++  + A+F N L  K A
Sbjct: 172 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSIAAVFQNILEKKYA 223



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T  ++F  M   T+IG  +   R+S   L+ W  ++Y+   R +P LV++F 
Sbjct: 22  YVIKGIGYTLLISFVSMFAGTVIGLFISLARMSKLALLRWPAKLYISFMRGVPILVILFI 81

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           LY     +            G  LN
Sbjct: 82  LYFGFPYIGIEFSAVTAALIGFSLN 106


>gi|312968399|ref|ZP_07782608.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 2362-75]
 gi|312286617|gb|EFR14528.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 2362-75]
 gi|323189118|gb|EFZ74402.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli RN587/1]
          Length = 368

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPYRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|331659559|ref|ZP_08360501.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA206]
 gi|331054141|gb|EGI26170.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA206]
          Length = 367

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPYRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV++PQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|257126581|ref|YP_003164695.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257050520|gb|ACV39704.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 237

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 11/213 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRH-----FHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           A    F+ ++GI +       ++      +  KT + +   YI   LI G P LV     
Sbjct: 31  AISLFFAVLIGIGVGYINFVPTKKKNFNFYLIKTLQWIGKEYID--LIRGTPLLVQAIFF 88

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y   F    +    F+ G  +SPE ++  I +S    AF+AEI R G+ A+  GQMEAA 
Sbjct: 89  Y---FGVVPIINKAFLNGQQMSPE-IAGVIIISLNAGAFLAEIFRGGIQAIDTGQMEAAR 144

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+  KA R V+LPQA++++IP + +Q++  LK++SL + +G ADL+  G        
Sbjct: 145 SLGLSFGKAMRKVILPQAIKNMIPAILNQFITSLKDTSLLMVIGVADLMGKGQIAFKTNY 204

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  E +LI   IY  +  +++    ++  K+ +
Sbjct: 205 KTFETMLIIALIYYLVIKILSTLFKKIEGKLKV 237



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVY 132
           S Y    L+G   T  +A   +  A +IG  VG                 K + WI + Y
Sbjct: 13  SEYKIEFLIGLGTTLLIAAISLFFAVLIGIGVGYINFVPTKKKNFNFYLIKTLQWIGKEY 72

Query: 133 VEVFRNIPPLVVIFFLYKSVL 153
           +++ R  P LV   F Y  V+
Sbjct: 73  IDLIRGTPLLVQAIFFYFGVV 93


>gi|318076786|ref|ZP_07984118.1| transporter transmembrane component [Streptomyces sp. SA3_actF]
          Length = 389

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 15/259 (5%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--------- 202
            L+   +   +  +  G+  N                I     +   V +L         
Sbjct: 101 WLATAVVLVLAAQVVHGLVTNPFYQWDRFAYWFLRPTILDGLLITLEVTALSAVLGLLGG 160

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LKYQLHFDKPVLGQFNFI 257
               L R       +A+   YI       L  L+L       L   L    P    F   
Sbjct: 161 VVLALGRLSRSPVLRAVSWTYIWLLRSTPLIVLLLFLYNFSALYQTLSLGVPFGPAFFTF 220

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             S ++ +     I LS   AA+ AE+VR+GL++V +GQ EAA ALGL  R     ++LP
Sbjct: 221 DESRLATDMAIAVIGLSLNEAAYAAEVVRAGLLSVDQGQHEAAAALGLPRRFQFLRIVLP 280

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLS 376
           QA+R+I+P   +Q + L+K++SL   V   DL     ++ +   G  + ++L+    Y+ 
Sbjct: 281 QALRAIVPGYVNQLIGLVKSTSLVFYVSLLDLFGSVQSLGSTYPGDIVPLLLVATVWYVL 340

Query: 377 LSIMIALFMNRLNAKIALK 395
           L+ ++++    +  + +  
Sbjct: 341 LTSLVSIAQFYVERRSSRG 359



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 78  PYTSDSSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           P+     +A   L      G + T  +     +   + G ++  GRLS + ++  +   Y
Sbjct: 122 PFYQWDRFAYWFLRPTILDGLLITLEVTALSAVLGLLGGVVLALGRLSRSPVLRAVSWTY 181

Query: 133 VEVFRNIPPLVVIFFLYK 150
           + + R+ P +V++ FLY 
Sbjct: 182 IWLLRSTPLIVLLLFLYN 199


>gi|82778576|ref|YP_404925.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|309785601|ref|ZP_07680232.1| general L-amino acid transport system permease protein aapM
           [Shigella dysenteriae 1617]
 gi|81242724|gb|ABB63434.1| putative transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|308926721|gb|EFP72197.1| general L-amino acid transport system permease protein aapM
           [Shigella dysenteriae 1617]
          Length = 368

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ ++  I PL+V + +Y    ++  +                     T
Sbjct: 126 -----------YIALWAVIYPLIVWWLMYGGFFALDRVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|117620358|ref|YP_856223.1| histidine ABC transporter, permease protein HisM [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117561765|gb|ABK38713.1| histidine ABC transporter, permease protein HisM [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 230

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 5/216 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   S +LG++L++    L R+      K     YI  F   G P L
Sbjct: 10  WPTYWQGLYTTVLLVAASLILGLMLAVPLGIL-RNSRNWLIKGPIWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y        L   N +     +  +    +A +  T A+ AEIVR  ++ +P+G
Sbjct: 67  VQLFIIYYGAAQWEWLK--NSVAWDLFAEAWFCALLAFTLNTGAYTAEIVRGAVLNMPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA A G+T  +    ++LP + R  +P  +++ + +L+ S++A  +   DL      
Sbjct: 125 QIEAANAFGMTRWQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARI 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I ++     E  L    +Y+ L+ +I     +  A+
Sbjct: 185 INSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWEAR 220



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 36/105 (34%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 G   T  L  + +I   ++   +G  R S N L+      Y+  FR  P LV +
Sbjct: 10  WPTYWQGLYTTVLLVAASLILGLMLAVPLGILRNSRNWLIKGPIWAYIYFFRGTPLLVQL 69

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           F +Y        + +      F        L+F   T    A+I 
Sbjct: 70  FIIYYGAAQWEWLKNSVAWDLFAEAWFCALLAFTLNTGAYTAEIV 114


>gi|218672038|ref|ZP_03521707.1| nopaline ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 242

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 5/207 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S   G  +S+    L R        A  L Y   F   G P LV + L Y  
Sbjct: 12  LTLVLTFASLAAGFAVSVPLAFL-RASSNPWASAPVLAYTYAF--RGTPLLVQLFLIYYG 68

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P++ Q      + +   F   +IA +  +AA   E++R G+ AVPRGQ+EAA ALG
Sbjct: 69  IGQLPLVRQSFL--WAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQIEAAKALG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     RL++ P  +R  +P   ++ + +LK SSLA  +   ++  +   ++++T    
Sbjct: 127 LSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLVSETFAPY 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E+ +     YL L+++I      L  +
Sbjct: 187 EVFIAAGAFYLLLTLLITQGFQMLETR 213


>gi|320656323|gb|EFX24235.1| putative transport system permease protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
          Length = 367

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y    ++  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVEP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|104784120|ref|YP_610618.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95113107|emb|CAK17835.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 230

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 85/188 (45%), Gaps = 3/188 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y             F         F +  
Sbjct: 41  KTSSVKPLQWLGGTYSTLVRGVPELLWVLLIYFGTVGLMNSLGALFNMPGLELSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T +      +   IYL L+++    M+ L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIGVTVTKEPFTFYAVAACIYLGLTVIAMTGMHFLEK 220

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 221 RAARGFMR 228


>gi|30064599|ref|NP_838770.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|56480303|ref|NP_709065.2| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30042858|gb|AAP18581.1| putative transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|56383854|gb|AAN44772.2| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|313648621|gb|EFS13062.1| general L-amino acid transport system permease protein aapM
           [Shigella flexneri 2a str. 2457T]
 gi|324119450|gb|EGC13333.1| inner membrane transport system [Escherichia coli E1167]
          Length = 367

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAAWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|191169154|ref|ZP_03030912.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B7A]
 gi|256018816|ref|ZP_05432681.1| amino acid ABC transporter permease component [Shigella sp. D9]
 gi|260857398|ref|YP_003231289.1| putative transport system permease protein [Escherichia coli
           O26:H11 str. 11368]
 gi|190900796|gb|EDV60587.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli B7A]
 gi|257756047|dbj|BAI27549.1| putative transport system permease protein [Escherichia coli
           O26:H11 str. 11368]
 gi|323154325|gb|EFZ40527.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli EPECa14]
          Length = 367

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|223933890|ref|ZP_03625854.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|253751333|ref|YP_003024474.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|253753234|ref|YP_003026374.1| amino acid ABC transporter permease protein [Streptococcus suis
           P1/7]
 gi|253755057|ref|YP_003028197.1| amino acid ABC transporter permease protein [Streptococcus suis
           BM407]
 gi|330832340|ref|YP_004401165.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|223897448|gb|EEF63845.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|251815622|emb|CAZ51208.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251817521|emb|CAZ55265.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251819479|emb|CAR45008.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|292557906|gb|ADE30907.1| permease protein [Streptococcus suis GZ1]
 gi|319757618|gb|ADV69560.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis JS14]
 gi|329306563|gb|AEB80979.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 229

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 106/220 (48%), Gaps = 5/220 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
               ++          I  FS   G +L +     ++    K       +Y+  F   G 
Sbjct: 7   PEYWAYFNYGAIVTLIIAFFSVFFGSILGVLL-AFAQRSKYKVLAWTANIYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + +        Q   +  +      +   I +S  + A+++E VR+G+ AV
Sbjct: 64  PMIVQIMIAFAMTHFVAPTFQLGIL--TVDLTRLIPGIIVISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  ++A R V++PQA+++I+P L ++++ ++K+SSL   +G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKQAMRYVIMPQAIKNILPALGNEFVTIVKDSSLLSTIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             T+ + +   +  ++     YL ++ ++ + +     K+
Sbjct: 182 AQTVQSTSYIPLTPLVFAASYYLIMTTVLTVIIQSFEKKL 221



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    Y      G + T  +AF  +   +I+G L+   + S  K++AW   +YV +FR 
Sbjct: 3   FSFLPEYWAYFNYGAIVTLIIAFFSVFFGSILGVLLAFAQRSKYKVLAWTANIYVWIFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPD 160
            P +V I   +     V P   
Sbjct: 63  TPMIVQIMIAFAMTHFVAPTFQ 84


>gi|190015056|ref|YP_001966754.1| amino acid ABC transporter, permease protein [Bacillus cereus]
 gi|190015322|ref|YP_001967078.1| amino acid ABC transporter, permease protein [Bacillus cereus]
 gi|116584732|gb|ABK00847.1| amino acid ABC transporter, permease protein [Bacillus cereus]
 gi|116585003|gb|ABK01112.1| amino acid ABC transporter, permease protein [Bacillus cereus]
          Length = 201

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)

Query: 189 IFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           + V  F++ IV+S+   F   L+   + K    L   YI  +++ G P L+ +     + 
Sbjct: 1   MTVLLFLIAIVVSIPMGFLLTLAVRSNLKPLSWLAQGYI--YVLRGTPLLLQLLF---IC 55

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L     IG   V   F++  +      AA+ AEI R GL+A+ +GQ EA+  LGL
Sbjct: 56  FGLPLL---PVIGEYLVMDRFVAACLGFILNYAAYFAEIFRGGLLAIDKGQYEASQVLGL 112

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +  R V+LPQ  R  +P + ++ + L+K+++L  AV   +L+    T +N+    I 
Sbjct: 113 SKWQTMRRVILPQMFRIALPAVANESVTLIKDTALLYAVAVPELLHFAQTAVNRDF-TIT 171

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +   IYL +++++ +F   L  +  
Sbjct: 172 PFFVAGLIYLIMTLVLTMFFKWLERRFK 199



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 34/72 (47%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L    ++ +  +G L+     S  K ++W+ + Y+ V R  P L+ + F+   +  +
Sbjct: 2   TVLLFLIAIVVSIPMGFLLTLAVRSNLKPLSWLAQGYIYVLRGTPLLLQLLFICFGLPLL 61

Query: 156 LPIPDHSIVLPF 167
             I ++ ++  F
Sbjct: 62  PVIGEYLVMDRF 73


>gi|227325816|ref|ZP_03829840.1| amino-acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 223

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L + + +  + L +   T+        F+ VLG++L+L      R         +  LYI
Sbjct: 5   LAYLLKVFPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+P+LV + + Y   F  P L       G +      +  I  S  T+A++AEI
Sbjct: 60  SLF--RGIPSLVQLFIIY---FGLPQL-----FPGLSNLDAMTAAIIGFSLKTSAYMAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL +V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+
Sbjct: 110 FRAGLASVDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ++L + G  I  ++ +  E  L+   IY  + I+ +    +L  K+    ++
Sbjct: 170 GVSELFAEGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKLNHSLQR 223



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T +LA   M  A ++G ++   R S   +V  I  +Y+ +FR IP LV +F +Y  +
Sbjct: 19  LPTTLFLAVVSMFFAMVLGLILALVRESKIVVVVKIVELYISLFRGIPSLVQLFIIYFGL 78

Query: 153 LSVLP 157
             + P
Sbjct: 79  PQLFP 83


>gi|149181761|ref|ZP_01860252.1| amino acid ABC transproter, permease [Bacillus sp. SG-1]
 gi|148850502|gb|EDL64661.1| amino acid ABC transproter, permease [Bacillus sp. SG-1]
          Length = 215

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 110/221 (49%), Gaps = 16/221 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      M    ++ V S  + I + LF   L +    K  + +  +YI  F++ G P +
Sbjct: 11  IDVFLKGMLLTFELTVVSVFIAIFIGLFFAFL-KISKMKVLEIIADIYI--FVVRGTPLI 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y             F   +     F S+ + L+ +  A+IAEI R  + ++ +G
Sbjct: 68  VQIFIFY-------------FGLTALQISGFWSVVLGLAFHNGAYIAEIFRGTIQSIDKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEA  +LG+++    R ++LPQA R  +PPL +Q++  LK+SSLA  +G  +L SV  T
Sbjct: 115 QMEAGRSLGMSNGLTMRRIILPQAFRRALPPLGNQFIIALKDSSLASFIGMYELFSVATT 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +  +LI    YL L +  ++ +N +  +++L +
Sbjct: 175 LGSNNFDYMTYLLIVAVYYLVLVLFFSVIVNFVEKRMSLSD 215



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
              L G + TF L    +  A  IG      ++S  K++  I  +Y+ V R  P +V IF
Sbjct: 12  DVFLKGMLLTFELTVVSVFIAIFIGLFFAFLKISKMKVLEIIADIYIFVVRGTPLIVQIF 71

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMF 170
             Y  + ++      S+VL     
Sbjct: 72  IFYFGLTALQISGFWSVVLGLAFH 95


>gi|237732153|ref|ZP_04562634.1| arginine transporter permease subunit ArtQ [Citrobacter sp. 30_2]
 gi|226907692|gb|EEH93610.1| arginine transporter permease subunit ArtQ [Citrobacter sp. 30_2]
          Length = 238

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIIGLALAMFFAVWESVKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L +A  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLADGFTINLGFVQIPVQMQIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 LGQWESGQALGLSKAAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLVSQYILKRIDLRATRFERR 236


>gi|223041401|ref|ZP_03611605.1| amino-acid ABC transporter permease [Actinobacillus minor 202]
 gi|223017791|gb|EEF16197.1| amino-acid ABC transporter permease [Actinobacillus minor 202]
          Length = 227

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 99/222 (44%), Gaps = 13/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL--IFGL 232
                   +  +  + V SF++G+++++    +           + L  +  ++  I G 
Sbjct: 13  FWPMVEAAVLVSIPLAVASFIIGMIIAVGVALIRVTPVNGVLHRIALAIVKVYISIIRGT 72

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I++ +   +  P +G F             +  I  S    A+ +E VR+ + +V
Sbjct: 73  PMLVQISVVF---YGLPAIGVF--------IDPIPAAIIGFSLNIGAYASETVRAAISSV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   +G+T+ +  R ++ PQA+R  +PPL++ ++ L K++SLA  V   ++  V
Sbjct: 122 PKGQWEAGFTIGMTYMQTFRRIIAPQAVRVAVPPLSNTFIGLFKDTSLASXVTVTEMFRV 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              + N +   + + +    IY     ++     +L  +   
Sbjct: 182 AQQMANMSYDFLPVYIEAGLIYWCFCWVLFYIQAKLEIRFNR 223


>gi|254422592|ref|ZP_05036310.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196190081|gb|EDX85045.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 476

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 82/211 (38%), Positives = 129/211 (61%), Gaps = 4/211 (1%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            ++V +  + IV      R+      + G    LL     ++  +    L  L +  +++
Sbjct: 269 GLWVIALAVAIVAIFVIWRIRLKSMVEDGSDGKLLM---GVMIAIGIAALAILVFAFNWN 325

Query: 248 KPVLGQFN-FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            P L +     GG T+S  +++    L+ YT AFIAEIVR+G+ +VPRGQ EAA ++GLT
Sbjct: 326 APQLSEAGRASGGLTMSVNYVASVTGLTFYTGAFIAEIVRAGIQSVPRGQWEAARSVGLT 385

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + KA RLV+ PQ++R ++PPL S++ NL KNSSLA AVG+ +L ++  T  NQTG+ IE+
Sbjct: 386 NDKAMRLVVFPQSLRVLLPPLNSEFANLAKNSSLAFAVGYPELYNLANTTFNQTGKPIEV 445

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L+ M  YL+L+++I+L MN+LN  +  KE+
Sbjct: 446 FLMMMATYLTLNLLISLNMNQLNKAVQFKER 476



 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/167 (30%), Positives = 79/167 (47%)

Query: 5   ARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL 64
           A+++          L D R   I+ Q+I+ + + + F +   N+  N+ +       GFL
Sbjct: 2   AQRSTKPTSGLRSLLRDERFWQIAFQVIVTIAVILTFSYLFGNLSQNLRRQGTEFSFGFL 61

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
              AGF I + ++ Y +  SYA  I  G VN+  L F  +I ATI+G   G    S N L
Sbjct: 62  QNPAGFGIGENMLGYETQDSYAKVIQAGIVNSLRLIFVSIITATIVGVAAGVASFSDNWL 121

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           +  I R YV + RN+P L+ + F Y +V   +P   + IV P     
Sbjct: 122 LHKISRTYVGLVRNVPLLLQLVFWYSAVFLAIPTEANQIVFPNPSLP 168


>gi|119898556|ref|YP_933769.1| amino acid permease [Azoarcus sp. BH72]
 gi|119670969|emb|CAL94882.1| conserved hypothetical amino acid permease [Azoarcus sp. BH72]
          Length = 217

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 14/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F  F     +            + + +FVLG ++ L     +R    +  +A    YI 
Sbjct: 1   MFVQFTTWDIVRNLLDAGKWTLALSLIAFVLGGIVGLAIL-FARISKNRALQAFTKGYIE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P L+ + + +           F           +++    L+ +T+A++AEI 
Sbjct: 60  VF--QGTPLLMQLFIVF-----------FGLSLLGIDVSPWIAAAAGLTLFTSAYLAEIW 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + AVP+GQ EA+ +L L++ +  R V+LPQA+R  + P     + ++K +++   +G
Sbjct: 107 RGCVEAVPKGQWEASSSLALSYAQQMRHVILPQALRIAVAPTVGFSVQVVKGTAVTSIIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           FA+L   G  + N T Q   +  +    Y +L   ++L+   L  K  +  
Sbjct: 167 FAELTKTGSMLANATFQPFMVFGLVAAGYFALCYPLSLYAKSLERKFHVAR 217



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 37/106 (34%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L     T  L+    +   I+G  +   R+S N+ +    + Y+EVF+  P 
Sbjct: 7   TWDIVRNLLDAGKWTLALSLIAFVLGGIVGLAILFARISKNRALQAFTKGYIEVFQGTPL 66

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L+ +F ++  +  +       I    G+ L               A
Sbjct: 67  LMQLFIVFFGLSLLGIDVSPWIAAAAGLTLFTSAYLAEIWRGCVEA 112


>gi|86360922|ref|YP_472809.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285024|gb|ABC94082.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 281

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/282 (22%), Positives = 124/282 (43%), Gaps = 15/282 (5%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GR +   ++A +  + V +    P  V I  ++  +L +      +  L     +     
Sbjct: 15  GRFAIAFVIAVMFVLNVVLIGFAPLRVQIAVVWLELLLLFLAFFATFHLSLPFIVEKLPF 74

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 + T   +   S V+   +++    +++        A+   Y S F       L 
Sbjct: 75  MISQG-LMTTIYVSAVSIVIASAIAILG-AVAKLSTNGFAYAIASFYTSFFR-----GLP 127

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y ++   P L          V     +  +ALS    A++ EI RSG+ ++ RGQ
Sbjct: 128 LLMQVYLIYLGLPQL--------GFVIDAVPAGILALSLCYGAYMTEIFRSGIQSIDRGQ 179

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA+ ++G       R ++LPQA+  IIPP  +Q++++LK+SSL   +G  +L+ +  T+
Sbjct: 180 WEASRSIGFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTL 239

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T Q +E+++    +Y  +SI + L   R+    A  + +
Sbjct: 240 GQKTFQHMEMLISAAMLYWIMSIGLELIQARIERHYARSKVR 281



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T +++   ++ A+ I  L    +LS N     I   Y   FR +P L+ ++ +Y  
Sbjct: 79  GLMTTIYVSAVSIVIASAIAILGAVAKLSTNGFAYAIASFYTSFFRGLPLLMQVYLIYLG 138

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  + D        + L               + 
Sbjct: 139 LPQLGFVIDAVPAGILALSLCYGAYMTEIFRSGIQSI 175


>gi|241759295|ref|ZP_04757401.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria flavescens SK114]
 gi|241320431|gb|EER56728.1| binding-protein-dependent transport system inner membrane protein
           [Neisseria flavescens SK114]
          Length = 248

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + +   Y++ F   G P  V I +   + F   V             I         
Sbjct: 60  WVLRKISFWYVTLF--RGTPLFVQIVIWAYVWFPFFVHPADGVLISGEAAIDLRRSYGAL 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL   + A+I EI R+G+ ++ +GQMEAA +LGLT+ +A R V+LPQA+R ++PP
Sbjct: 118 IAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYTQAMRYVILPQALRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S+++ LLK+SSL   +G A+L  V  TI  +     E +     IYL L+  +     
Sbjct: 178 LASEFITLLKDSSLLSVIGVAELAYVQSTITGRYSVYEEPLYTIALIYLVLTSFLGWVFL 237

Query: 387 RLNAKIALKEK 397
           RL ++   + +
Sbjct: 238 RLESRYNPQHR 248


>gi|218887772|ref|YP_002437093.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758726|gb|ACL09625.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 316

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 14/185 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    + G+AL + Y+ T  +   P L+ + + Y +    PVLG             F +
Sbjct: 143 RQSGSRVGRALAVAYVET--VRNTPLLIQLFVVYFV--LAPVLGL----------GRFAA 188

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+IAEI+R+G+++VP GQ EA+ +LG+        V+LPQA R+ +PPLT
Sbjct: 189 GVLALSLFEGAYIAEILRAGILSVPTGQWEASRSLGMDVPGTYMEVVLPQAARTALPPLT 248

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            Q ++L+K+SSL   +   DL      +   T    E+  +   +YL+L++ ++     L
Sbjct: 249 GQLVSLVKDSSLVSTIALHDLAMQAQAVAADTFLVFEVWFLVAGMYLALTLSLSALAQLL 308

Query: 389 NAKIA 393
             ++ 
Sbjct: 309 ERRLR 313



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +  + +  A + G L    R S +++   +   YVE  RN P L+ +F +
Sbjct: 114 LLDGLGVTVQVVAASLGLALLAGLLAALLRQSGSRVGRALAVAYVETVRNTPLLIQLFVV 173

Query: 149 YKSV 152
           Y  +
Sbjct: 174 YFVL 177


>gi|116496268|ref|YP_808002.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|191639796|ref|YP_001988962.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|227532736|ref|ZP_03962785.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239630724|ref|ZP_04673755.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|116106418|gb|ABJ71560.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus casei ATCC 334]
 gi|190714098|emb|CAQ68104.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|227189570|gb|EEI69637.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239527007|gb|EEQ66008.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|327383908|gb|AEA55384.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei LC2W]
 gi|327387089|gb|AEA58563.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei BD-II]
          Length = 486

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 18/237 (7%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
              D        +  N   L                F+ V+GI++ L           + 
Sbjct: 265 KTQDSDRSFLGLLRENWGTLMGGLKETMIVTIVAIFFATVVGILVGLLG-----VLPNQF 319

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            + +   +I  F   GLP LVL    Y      P L         +  P F++  I L+ 
Sbjct: 320 ARGVATTFIYIF--RGLPLLVLALFIYT---GVPSLIG-------SKIPAFVAGIITLTL 367

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+ A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  L
Sbjct: 368 NEGAYTAAFVKGGIQAVDDGQMEAARSLGLPFGKAMRRVILPQGIKIMIPSFINQFIITL 427

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K++S+   +G  +L   G  II +  +  +I  +   IYL +  ++    N +  ++
Sbjct: 428 KDTSILSIIGILELTQTGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQRRM 484



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 37/79 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +    +  AT++G LVG   +  N+    +   ++ +FR +P LV+ 
Sbjct: 281 WGTLMGGLKETMIVTIVAIFFATVVGILVGLLGVLPNQFARGVATTFIYIFRGLPLLVLA 340

Query: 146 FFLYKSVLSVLPIPDHSIV 164
            F+Y  V S++     + V
Sbjct: 341 LFIYTGVPSLIGSKIPAFV 359


>gi|167039130|ref|YP_001662115.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X514]
 gi|300913280|ref|ZP_07130597.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X561]
 gi|307723706|ref|YP_003903457.1| polar amino acid ABC transporter inner membrane subunit
           [Thermoanaerobacter sp. X513]
 gi|166853370|gb|ABY91779.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X514]
 gi|300889965|gb|EFK85110.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X561]
 gi|307580767|gb|ADN54166.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter sp. X513]
          Length = 220

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+   +  +G++L L    L +    K    +   Y+   +I G P LV + L Y  
Sbjct: 21  MTLKLTFLAVTIGVILGLIV-ALIKMSSIKPISFIGASYVE--IIRGTPLLVQLLLIYN- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L QF         P F +   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG
Sbjct: 77  -----GLMQFG-----IDIPAFTAGVFALAINSAAYVAEIIRAGIQAVDPGQNEAARSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +TH  A R V++PQA+++I+P L ++++ +LK S++   +GFADL      I + T +  
Sbjct: 127 MTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIISVIGFADLTRQADIIQSITYKYF 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +I   IY  ++ + +  +     ++   + +
Sbjct: 187 EPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR 220



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 46/111 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           V + S   Y+   + G + T  L F  +    I+G +V   ++S+ K +++I   YVE+ 
Sbjct: 3   VDFLSMVKYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVEII 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R  P LV +  +Y  ++             F + +N+       +     A
Sbjct: 63  RGTPLLVQLLLIYNGLMQFGIDIPAFTAGVFALAINSAAYVAEIIRAGIQA 113


>gi|119719814|ref|YP_920309.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermofilum pendens Hrk 5]
 gi|119524934|gb|ABL78306.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermofilum pendens Hrk 5]
          Length = 218

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 11/176 (6%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            PL  +    + G P LV + L Y           F           F S ++AL   +A
Sbjct: 48  RPLARMYIEPVRGTPLLVQLLLIY-----------FGLPSIGIKLDAFTSSFLALGLNSA 96

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI RS L ++P  Q+ +A +LG +  +  R V+LPQA+R  IP L ++++ ++K S
Sbjct: 97  AYQAEIFRSALKSIPDVQILSAESLGFSGSQVYRYVILPQALRISIPSLVNEFVTVVKES 156

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           SLA  +G  +L   G  +   T +A+E  L+   IY ++  +I+    R+  KI +
Sbjct: 157 SLASVIGIVELTRRGEYVAAYTYRALESYLVVAAIYFAVCYLISYLSRRIEEKIRI 212


>gi|77408203|ref|ZP_00784948.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77173218|gb|EAO76342.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 267

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 105/256 (41%), Gaps = 9/256 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++   + + + L               +      L    +T+       +F  +L ++ +
Sbjct: 5   ILTGGWSWYNNLVSQVPAGKLFSWKAVLDAIPSILERLPITLLLTVAGALFGLILALIFA 64

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
           +      +  +       P+  +    + G P LV + L Y     F K +  ++ F   
Sbjct: 65  VVKINRVKILY-------PIQALFVSFLRGTPILVQLMLSYYGIPLFLKFLNQKYGFDWN 117

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P  +    A +   AA+ +E +R+ +++V +G++EAA +LG+T  +  R V++P A
Sbjct: 118 INAIPASVFAITAFAFNEAAYTSETIRAAILSVDQGEIEAARSLGMTSAQVYRRVIIPNA 177

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
                P L +  + L K +SLA   G  ++ +    +     +  E  +    +Y ++S 
Sbjct: 178 AVVATPTLINTLIGLTKGTSLAFNAGIVEMFAQAQIMGGSDYRYFERYISVALVYWAVSF 237

Query: 380 MIALFMNRLNAKIALK 395
           +I    N +  K+A+K
Sbjct: 238 LIEQLGNAIERKMAIK 253


>gi|147669042|ref|YP_001213860.1| polar amino acid ABC transporter, inner membrane subunit
           [Dehalococcoides sp. BAV1]
 gi|146269990|gb|ABQ16982.1| amino acid ABC transporter membrane protein, PAAT family
           [Dehalococcoides sp. BAV1]
          Length = 273

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/193 (28%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             R    F+ +  + +PLL    +  F  P ++   +   L+F   +  Q N I      
Sbjct: 91  LIRGIATFYVEIVRGIPLLVQLIWWYFAFPVIIQ-TIGQALNFGPMLNYQANPI------ 143

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              +     ++    A+++EI R+G+ ++P+GQMEAA +LG++H +A R ++LPQA+R I
Sbjct: 144 ---VMAIWGMTFCYGAYMSEIYRAGIQSIPKGQMEAARSLGMSHTQAMRFIILPQALRVI 200

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PP+ +++++LLK++SL   V  AD+V +G          IE+  +   +YL L+++ + 
Sbjct: 201 LPPMGNEFISLLKDTSLVSTVAVADMVRLGREFTATNFNPIEVWSMIALLYLILTLLSSR 260

Query: 384 FMNRLNAKIALKE 396
            +N +  K A   
Sbjct: 261 LINYIEKKTAFSR 273



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 2/119 (1%)

Query: 70  FEIDQGIVPYTSDS--SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           F +  G++ +  D        + VG   T  +A        I+G   G GRLS N L+  
Sbjct: 35  FALAGGLMLFQPDPFLDIFKYVWVGIGITVLVAVVSYFLMLILGLFGGLGRLSQNTLIRG 94

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           I   YVE+ R IP LV + + Y +   ++     ++     +      +      M   
Sbjct: 95  IATFYVEIVRGIPLLVQLIWWYFAFPVIIQTIGQALNFGPMLNYQANPIVMAIWGMTFC 153


>gi|296332695|ref|ZP_06875155.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673039|ref|YP_003864711.1| putative ABC transporter permease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149975|gb|EFG90864.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411283|gb|ADM36402.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 226

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 14/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   L      +    +     I   S   G V+ LF   L+R       +    
Sbjct: 6   QWEYIFNTKLAIESFPYVIKGIGYTLLISFVSMFAGTVIGLFI-SLARMSQLALLRWPAK 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G+P LV++ + Y           F F           +  I  S  +AA+I
Sbjct: 65  LYISF--MRGVPILVILFILY-----------FGFPYIGIEFSAVTAALIGFSLNSAAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RS + +V +GQ EAA +LGL++ +  R ++LPQ++R  +PPL +  L+L+K SSLA
Sbjct: 112 AEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIRIALPPLANVLLDLIKASSLA 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+     I  +    + + ++   IY ++    A F N L  K A
Sbjct: 172 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSAAAAFQNILEKKYA 223



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T  ++F  M   T+IG  +   R+S   L+ W  ++Y+   R +P LV++F 
Sbjct: 22  YVIKGIGYTLLISFVSMFAGTVIGLFISLARMSQLALLRWPAKLYISFMRGVPILVILFI 81

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           LY     +            G  LN
Sbjct: 82  LYFGFPYIGIEFSAVTAALIGFSLN 106


>gi|293449593|ref|ZP_06664014.1| general L-amino acid transport system permease [Escherichia coli
           B088]
 gi|291322683|gb|EFE62112.1| general L-amino acid transport system permease [Escherichia coli
           B088]
 gi|320202180|gb|EFW76755.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli EC4100B]
 gi|323946883|gb|EGB42899.1| inner membrane transport system [Escherichia coli H120]
          Length = 367

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAAWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|606211|gb|AAA58074.1| ORF_o368b [Escherichia coli str. K-12 substr. MG1655]
 gi|315617080|gb|EFU97690.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 3431]
          Length = 368

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 126 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGR 365


>gi|118476113|ref|YP_893264.1| amino acid ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|118415338|gb|ABK83757.1| amino acid ABC transporter membrane protein, PAAT family [Bacillus
           thuringiensis str. Al Hakam]
          Length = 233

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 44  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 89

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + ++ RGQ+EAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 90  GAIALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLG 149

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++   F+N L
Sbjct: 150 NQFIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLETYMIVGLYYLVLVLLFTYFVNLL 209

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 210 EKRLQRKE 217


>gi|317401660|gb|EFV82285.1| glutamate/aspartate transport system permease 2 [Achromobacter
           xylosoxidans C54]
          Length = 250

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 8/220 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+      +VFS +LG  L +  T  SR        A  +      +   +P L
Sbjct: 26  LIGVGWTLALALTAWVFSLLLGSCLGVMRTASSRL-------ANAIGATYVEIFRNVPLL 78

Query: 236 VLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V + L Y  L    P               +F+   + L  Y +A +AE +R+G+ ++PR
Sbjct: 79  VQMFLWYFVLPELLPHAWGLAMKQMPQPWGQFLPAVLCLGFYGSARVAEQLRAGIQSLPR 138

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ +A  ALGLT  +  R ++LP+A R ++PPLTS+++  +K SS+A+ +G  +L     
Sbjct: 139 GQFQAGTALGLTETQVYRHIILPEAYRIVLPPLTSEFMGTIKYSSVALTIGLLELTGQTR 198

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++   +    E       IYL L+ ++ L M  L   +A+
Sbjct: 199 SMAEFSFHIFEAFTAATVIYLILNGIVVLGMRLLERHVAV 238



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 43/77 (55%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   IL+G   T  LA +  + + ++G+ +G  R ++++L   I   YVE+FRN+P LV
Sbjct: 20  TFLETILIGVGWTLALALTAWVFSLLLGSCLGVMRTASSRLANAIGATYVEIFRNVPLLV 79

Query: 144 VIFFLYKSVLSVLPIPD 160
            +F  Y  +  +LP   
Sbjct: 80  QMFLWYFVLPELLPHAW 96


>gi|293602701|ref|ZP_06685142.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818892|gb|EFF77932.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 260

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 8/220 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+      +VFS +LG  L +  T  SR  +        L      L   +P L
Sbjct: 26  LIGVGWTLALALTAWVFSLLLGSWLGVMRTAQSRVKNV-------LGATYVELFRNVPLL 78

Query: 236 VLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V + L Y  L    P               +F+   + L  Y +A +AE +R+G+ ++PR
Sbjct: 79  VQMFLWYFVLPELLPHAWGLAMKQMPQPWGQFVPAVLCLGFYGSARVAEQLRAGIQSLPR 138

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ +A  ALGLT  +  R ++LP+A R ++PPLTS+++  +K SS+A+ +G  +L     
Sbjct: 139 GQFQAGTALGLTEGQVYRYIILPEAFRIVLPPLTSEFMGTIKYSSVALTIGLLELTGQAR 198

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++   +    E       IYL L+ M+ L M  L   IA+
Sbjct: 199 SMQEFSFHIFEAFSAATVIYLILNGMVVLGMRLLERHIAV 238



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 42/77 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   IL+G   T  LA +  + + ++G+ +G  R + +++   +   YVE+FRN+P LV
Sbjct: 20  TFLETILIGVGWTLALALTAWVFSLLLGSWLGVMRTAQSRVKNVLGATYVELFRNVPLLV 79

Query: 144 VIFFLYKSVLSVLPIPD 160
            +F  Y  +  +LP   
Sbjct: 80  QMFLWYFVLPELLPHAW 96


>gi|317047480|ref|YP_004115128.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949097|gb|ADU68572.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 219

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L            I V   V G+++ L A   +R +       + L++I
Sbjct: 1   MEFDWSVIWPALPILLEGAKMTLIISVLGLVGGLIIGLVAG-FARAYGGWIANNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIVVQVMFIY---FALPMAFP------DLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINKGFREAGLALGLSRRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + R+  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRVKI 218


>gi|145299600|ref|YP_001142441.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           protein [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142852372|gb|ABO90693.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 230

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 5/216 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   S +LG+ L++    L R+      K     YI  F   G P L
Sbjct: 10  WPTYWQGLYTTVLLVAASLILGLALAVPMGIL-RNSRNWLIKGPIWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y        L   N    +  +  +    +A +  T A+ AEIVR  ++ +P+G
Sbjct: 67  VQLFIIYYGAAQWEWLK--NSAAWTLFAEAWFCALLAFTLNTGAYTAEIVRGAVLNMPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA A G++  +    ++LP + R  +P  +++ + +L+ S++A  +   DL      
Sbjct: 125 QIEAANAFGMSRWQTLTRIILPNSFRRALPAYSNEVIFMLQGSAVAGIITIVDLTGAARI 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I ++     E  L    +Y+ L+ +I     +  A+
Sbjct: 185 INSRYYSPFEAFLTAGLLYMLLTFVIVWLFKKWEAR 220



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 36/105 (34%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 G   T  L  + +I    +   +G  R S N L+      Y+  FR  P LV +
Sbjct: 10  WPTYWQGLYTTVLLVAASLILGLALAVPMGILRNSRNWLIKGPIWAYIYFFRGTPLLVQL 69

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           F +Y        + + +    F        L+F   T    A+I 
Sbjct: 70  FIIYYGAAQWEWLKNSAAWTLFAEAWFCALLAFTLNTGAYTAEIV 114


>gi|225019854|ref|ZP_03709046.1| hypothetical protein CLOSTMETH_03808 [Clostridium methylpentosum
           DSM 5476]
 gi|224947414|gb|EEG28623.1| hypothetical protein CLOSTMETH_03808 [Clostridium methylpentosum
           DSM 5476]
          Length = 220

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+   A + + S  LG  +++ A         K    L   YI  +++ G P L+ +  
Sbjct: 16  YTVCLFAIVIICSIPLGFCITMIA-----KSKIKPLAMLARAYI--YVVRGTPLLLQLLF 68

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                +  PV+G   FI        F S  +A     +A+ AEI R GL+AV +GQ EAA
Sbjct: 69  FCFGLYYLPVIGPAIFISN-----RFASATVAFIINYSAYFAEIFRGGLLAVDKGQYEAA 123

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LGL   +    +++PQ +R  +P L+++ + L+K+++L  +VG  ++++   TI+N T
Sbjct: 124 QVLGLRRGQTMFRIIIPQMVRVCMPTLSNEAVTLVKDTALLYSVGVVEILTQAKTIVNGT 183

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I    I   IYL L+ +++  + R+  K++  E
Sbjct: 184 YN-ISAYFIAAIIYLILNTILSFGLKRIEKKLSFGE 218


>gi|197335320|ref|YP_002156402.1| octopine transport system permease protein OccM [Vibrio fischeri
           MJ11]
 gi|197316810|gb|ACH66257.1| octopine transport system permease protein OccM [Vibrio fischeri
           MJ11]
          Length = 225

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 97/222 (43%), Gaps = 9/222 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   S V+G+ +++  T ++R+ +          YI  F   G P L
Sbjct: 10  LPVYLEGLWTTVWLVSVSLVIGLCIAV-PTAIARNSNNPVLWLPAWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y        + QF  +  +          +A +  T A+ AEIVR  +  +P+G
Sbjct: 67  IQLYLIYY------GMDQFFPVKDTLWEHASFCALVAFTLNTGAYTAEIVRGSINGLPQG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G+   +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMNQFQTYKRIILPSALRRALPAYSNEVIFMLHGSAIAGIVTLLDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + ++     E  +     Y+ L+ +I     +L  ++    +
Sbjct: 181 VNSRYYAPFESYIAAGMFYMCLTFIIIFIFKQLETRMLRFMR 222



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 28/78 (35%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++    I       R S N ++      Y+  FR  P L+ ++ 
Sbjct: 12  VYLEGLWTTVWLVSVSLVIGLCIAVPTAIARNSNNPVLWLPAWAYIYFFRGTPLLIQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVL 165
           +Y  +    P+ D     
Sbjct: 72  IYYGMDQFFPVKDTLWEH 89


>gi|332102248|gb|EGJ05594.1| his/Glu/Gln/Arg/opine ABC transporter permease [Shigella sp. D9]
          Length = 368

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|330813244|ref|YP_004357483.1| putative amino acid ABC transporter, permease protein [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486339|gb|AEA80744.1| putative amino acid ABC transporter, permease protein [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 239

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 119/235 (50%), Gaps = 17/235 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
                 S     G+      +S  T T+  +    V + V+G+++++ A   +++     
Sbjct: 21  WGWFILSPSNATGLTNLKFLISGITTTIYISTISIVIAMVVGLLIAIPAITKNKY----- 75

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
                L Y++ F +  + ++ L+ L   +++  P+L   +F         F+S  IALS 
Sbjct: 76  -----LSYVNVFYVEVVRSVPLLVLILWVYYGLPILTGLSF-------SPFVSGIIALSI 123

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +AF+AEI R G+ A+ + Q EAA +LGL   K  +LV+LPQA + I+P L +Q++ +L
Sbjct: 124 SESAFMAEIFRGGINAIKKTQWEAATSLGLNFSKKLKLVILPQAFKVILPALGNQFVYVL 183

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           K SSL   +G +DL      ++  T + +EI    +  YL L ++++ F+ RL  
Sbjct: 184 KMSSLVSIIGISDLTRKANELVVSTYRPLEIYTFLILEYLVLILIVSYFVRRLEK 238


>gi|229515241|ref|ZP_04404701.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229347946|gb|EEO12905.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
          Length = 225

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 97/217 (44%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + +   +   S V+G++ ++    ++R+  +K        YI    + G P L
Sbjct: 10  LPIYLSGLWSTVWLVSLSLVIGLLCAIPL-AIARNSKQKWFSLPAWGYIYF--LRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + Q+  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I     +   + 
Sbjct: 181 VNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRF 217



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 34/102 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G  +T WL    ++   +    +   R S  K  +     Y+   R  P LV ++ +
Sbjct: 13  YLSGLWSTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|257125144|ref|YP_003163258.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049083|gb|ACV38267.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 237

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 9/234 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              F +      L    +T++      +FS +L   ++L           K      L  
Sbjct: 9   NWGFMVRAIPEILKALPMTLNIAIVTMIFSLILSFFIALVRI-------NKIPVLTRLAT 61

Query: 224 ISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           I    I G P LV I L Y         +  ++ F       P  + +Y+A     + ++
Sbjct: 62  IYVSFIRGTPLLVQIYLAYYGLPKILDYIHLKYGFNIDVNNIPAIIFVYVAFILNVSGYL 121

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E  R+ + +V +GQ+EAA+++G+T  +A R ++LPQA+    P   + +++L+K+SSLA
Sbjct: 122 SETFRAAIQSVDKGQVEAALSIGMTKWQAMRRIVLPQAIIITFPNFGNTFISLIKDSSLA 181

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             V   +++     I        E  ++   IY  + I++   M  +  K+ + 
Sbjct: 182 FTVSIVEMMGKAKIISASGLDIFEAYIVVAGIYWVVCIIVEKVMGIVEKKLRVG 235



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  +A   MI + I+   +   R++   ++  +  +YV   R  P LV I+  
Sbjct: 20  ILKALPMTLNIAIVTMIFSLILSFFIALVRINKIPVLTRLATIYVSFIRGTPLLVQIYLA 79

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 80  YYGLPKI 86


>gi|270261143|ref|ZP_06189416.1| transporter [Serratia odorifera 4Rx13]
 gi|270044627|gb|EFA17718.1| transporter [Serratia odorifera 4Rx13]
          Length = 238

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRL--SRH--------FHEKTGKALPLLYISTFLIFGLPT 234
               + V + +LG++L++       SR               + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALILGLILAMLFAVWESSRWKVVSWLGTAWVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L+    + L+F    L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLLMLSDGFTLNFGLFQLPIQLAIDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALG++       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 QGQWESGQALGMSTAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL +++     + R+  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLVVTLFSQYAIKRIELRTTRFER 235


>gi|239833272|ref|ZP_04681600.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821335|gb|EEQ92904.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 241

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 110/234 (47%), Gaps = 9/234 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           LPF             LT+   A   +   VL  +L+       R         +   YI
Sbjct: 6   LPFMFDSFVELCRGIPLTLQLMALSVISGAVLATILATM-----RLSGNLILDLIARGYI 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F++ G P LV + + Y      P L +        +   +    +AL+  TAA+ AEI
Sbjct: 61  --FVLRGTPLLVQLYIIYYGLSQFPELRRSFL--WPFLREPYWCAVLALALNTAAYSAEI 116

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+++V  GQ+EAA A G++     R +L PQA+R ++P  +++ + ++K+++LA  +
Sbjct: 117 IRGGVLSVATGQIEAARAYGMSGFTLVRRILAPQALRQMLPAYSNEVILMVKSTALASTI 176

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++  +   +I+ T + +E+ +    IYL L+ ++      L  +++  +++
Sbjct: 177 TMMEVTGLAAKLISATYRPVEVFICAGAIYLLLNFVVTRIFKLLEYRLSAAQRQ 230



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 1/108 (0%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L    +I   ++ T++   RLS N ++  I R Y+ V R  P LV ++ +Y  
Sbjct: 19  GIPLTLQLMALSVISGAVLATILATMRLSGNLILDLIARGYIFVLRGTPLLVQLYIIYYG 78

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
            LS  P    S + PF        +    L     +   +   VL + 
Sbjct: 79  -LSQFPELRRSFLWPFLREPYWCAVLALALNTAAYSAEIIRGGVLSVA 125


>gi|25028000|ref|NP_738054.1| putative amino acid ABC transporter permease protein
           [Corynebacterium efficiens YS-314]
 gi|23493283|dbj|BAC18254.1| putative amino acid ABC transporter permease protein
           [Corynebacterium efficiens YS-314]
          Length = 240

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 6/210 (2%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKP 249
            S ++G+V       + R       + +  LY+  F   G P  V +     L   +   
Sbjct: 2   LSMIIGVVFG-ATLAVMRMSGNPVLQGVAWLYLWIF--RGTPIYVQLVFWGLLGSLYQTV 58

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG       + +S  F+   + L    AA++AEIVRSG+ AVP GQMEA+ ALG+    
Sbjct: 59  NLGFAEIDLQNFLSNMFILAVLGLGLNEAAYMAEIVRSGIQAVPEGQMEASKALGMGWSL 118

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIIL 368
             R  +LPQAMR IIPP  ++ +++LK +SL VAV ++ +L      I     + + ++L
Sbjct: 119 TMRRTVLPQAMRIIIPPTGNELISMLKTTSLVVAVPYSLELYGRSMDIAYSLFEPVPMLL 178

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    YL ++ ++ +    L         +
Sbjct: 179 VAATWYLVITSVLMVGQYYLEKHFEKGSTR 208



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 29/76 (38%)

Query: 101 FSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
              MI   + G  +   R+S N ++  +  +Y+ +FR  P  V + F          +  
Sbjct: 1   MLSMIIGVVFGATLAVMRMSGNPVLQGVAWLYLWIFRGTPIYVQLVFWGLLGSLYQTVNL 60

Query: 161 HSIVLPFGMFLNNRGL 176
               +    FL+N  +
Sbjct: 61  GFAEIDLQNFLSNMFI 76


>gi|281602646|gb|ADA75630.1| putative transport system permease protein [Shigella flexneri
           2002017]
          Length = 368

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y     +  +                     T
Sbjct: 126 -----------YIAAWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|154686885|ref|YP_001422046.1| GlnM [Bacillus amyloliquefaciens FZB42]
 gi|154352736|gb|ABS74815.1| GlnM [Bacillus amyloliquefaciens FZB42]
          Length = 216

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 18/209 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 SF LG+++++           +     PL +I T  +  +  + L+ + +  +F
Sbjct: 25  FIALAGSFALGVLIAVM----------RITAFKPLQWIGTAYVEFIRNIPLLLITFVFYF 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P                F +  IAL+ YT+AFIAE +R+G+  V +GQMEAA + G T
Sbjct: 75  GLP--------NAGLRLDGFQAGTIALTIYTSAFIAEAIRAGIQTVSKGQMEAARSSGFT 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A R V+LPQA++ +IPPL +Q+LNL+KNSS+   V   DL+     + + T    ++
Sbjct: 127 YSQAMRYVILPQAVKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDV 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +     YL ++I +++ ++ L  ++   
Sbjct: 187 YIFVALFYLIVTIPLSIGVHYLERRLGKS 215



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GF++T   +F  +  +  +G L+   R++A K + WI   YVE  RNIP L++ F  
Sbjct: 13  YIDGFLHTLLASFIALAGSFALGVLIAVMRITAFKPLQWIGTAYVEFIRNIPLLLITFVF 72

Query: 149 YKSVLSV 155
           Y  + + 
Sbjct: 73  YFGLPNA 79


>gi|50123395|ref|YP_052562.1| amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613921|emb|CAG77374.1| probable amino acid ABC transporter, permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 256

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 18/205 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF LG+++ L     +R    +        ++ T     L  + L+ + +  +F  P+L 
Sbjct: 42  SFPLGVLVGL-----ARLSPWRWLSWPATCWVYT-----LRGIPLMMVVFWTYFCVPLLI 91

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             N  G       F ++   L  Y +A+IAEIVR G+ A+P GQ EA+ ALG++H KA R
Sbjct: 92  GHNISG-------FSTMLCTLVIYESAYIAEIVRGGIQALPSGQYEASRALGMSHLKALR 144

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWM 371
           LV+LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   +  ++  I  
Sbjct: 145 LVILPQALFNSLPSLISQLVSIIKDSTLGYVINVPELTYAANQVSNQLLTKPFQVFAIVA 204

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
             Y  +        NRL + IA K 
Sbjct: 205 LSYYIICFSFTFLANRLESWIANKR 229



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 36/77 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  ++   ++ +  +G LVG  RLS  + ++W    +V   R IP ++V+F+ Y
Sbjct: 25  LGGVLCTLLISLLAVLLSFPLGVLVGLARLSPWRWLSWPATCWVYTLRGIPLMMVVFWTY 84

Query: 150 KSVLSVLPIPDHSIVLP 166
             V  ++          
Sbjct: 85  FCVPLLIGHNISGFSTM 101


>gi|322372981|ref|ZP_08047517.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321278023|gb|EFX55092.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 155

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/130 (34%), Positives = 75/130 (57%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +  +I  S  +AA++AEI+RS + AV +GQ EAA +LGL  +   R ++LPQAMR  
Sbjct: 24  PALLCAFIGFSSVSAAYMAEILRSSISAVDKGQWEAARSLGLPKKSIIRHIILPQAMRIA 83

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + PL +  ++++K+SSLA  +   D+      I  +    + + ++  FIY +LS  + L
Sbjct: 84  VAPLGNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREYDYMSMYILIAFIYWTLSFTLEL 143

Query: 384 FMNRLNAKIA 393
             N L  ++A
Sbjct: 144 LQNHLEKRLA 153


>gi|62185155|ref|YP_219940.1| ABC transporter, membrane permease [Chlamydophila abortus S26/3]
 gi|62148222|emb|CAH63981.1| ABC transporter, membrane permease [Chlamydophila abortus S26/3]
          Length = 215

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 108/230 (46%), Gaps = 15/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L     T+  +    +    LG+++       SR+F  +  + L  LY+
Sbjct: 1   MEHWVATARVLLRGCGYTLFVSGISILCGSFLGVIIGTMT---SRYFPCRITRCLGNLYV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P  + I + Y   F  P + + +           M+  IALS  ++A++AE 
Sbjct: 58  T--VIRGTPLFIQILIFY---FGLPSIIRLD-------PTPLMAGLIALSINSSAYLAEN 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ A+  GQ E+A  LG    +    ++ PQ  ++I+P LT++++ L+K SS+ + V
Sbjct: 106 IRGGINALSVGQWESAKVLGYKKSQIFFYIIYPQVFKNILPSLTNEFVALIKESSILMVV 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L  V   I+++    +E+  I   +YL ++ + +     L  +  +
Sbjct: 166 GVPELTKVSKDIVSRELNPMEMYSICAALYLLMTSLFSYVATLLEKRGGV 215



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAG--RLSANKLVAWICRVYVEVFRNIPPLV 143
           A  +L G   T +++   ++  + +G ++G    R    ++   +  +YV V R  P  +
Sbjct: 8   ARVLLRGCGYTLFVSGISILCGSFLGVIIGTMTSRYFPCRITRCLGNLYVTVIRGTPLFI 67

Query: 144 VIFFLYKSVLSVLP 157
            I   Y  + S++ 
Sbjct: 68  QILIFYFGLPSIIR 81


>gi|260583731|ref|ZP_05851479.1| polar amino acid uptake (PAAT) family ABC transporter permease
           [Granulicatella elegans ATCC 700633]
 gi|260158357|gb|EEW93425.1| polar amino acid uptake (PAAT) family ABC transporter permease
           [Granulicatella elegans ATCC 700633]
          Length = 216

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 14/230 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + L    LSF    +     I   SF+ G +L  F   L +  + +  + +   ++S
Sbjct: 1   MFNLKLAIHSLSFVLSGLQYTLGIAGVSFIFGTILG-FMFVLMKRSNIRVLRMIANFHVS 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G PTLV + L   L+F  P L            P  +   +  S  ++A+I E++
Sbjct: 60  F--MRGTPTLVFLFL---LYFGLPYLK--------IQLPALVCAILCFSIASSAYICEVL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RS + AV  GQ EA+ +LGL + +  R V++PQA R  +PPL++  L+++K +SLA  + 
Sbjct: 107 RSSIDAVDYGQWEASTSLGLNYFQTLRRVIVPQAFRISVPPLSNVLLDMIKGTSLAAMIT 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             D+      +  +    + + ++   IY S+ ++       L  +++L 
Sbjct: 167 VPDIFQNAKIVGGREFDYMTMYILVALIYWSICLVFEQGQKILEKRLSLY 216



 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +A    I  TI+G +    + S  +++  I   +V   R  P LV +F LY
Sbjct: 15  LSGLQYTLGIAGVSFIFGTILGFMFVLMKRSNIRVLRMIANFHVSFMRGTPTLVFLFLLY 74

Query: 150 KSVL 153
             + 
Sbjct: 75  FGLP 78


>gi|224823797|ref|ZP_03696906.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224604252|gb|EEG10426.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 219

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 18/223 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +     T+       V   +LG V++L           +     PLL     ++ G P L
Sbjct: 15  IKGTGYTVFFALSTMVLGLLLGFVVALVRIA-------RVPLLAPLLAFYVSVMRGTPLL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I + Y                         +  ++L+   AA+++E +R  +  V RG
Sbjct: 68  VQIFVIYY-----------GLPSVGIEFEPVTAGVLSLTLNVAAYLSESLRGAIAGVERG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q +AA +LGL   +A R V+ PQA+R  +P L +  ++L+K++SL   +  ++L+     
Sbjct: 117 QWDAAQSLGLNWWQAMRFVVAPQALRLAVPSLANSLISLIKDTSLVSVITVSELMMATKD 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I QT Q + + L+   IY +LS +      RL  ++A   ++
Sbjct: 177 VIAQTFQPLPLYLMAAAIYWALSALFEQVQKRLELRLAHAYRR 219



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T + A S M+   ++G +V   R++   L+A +   YV V R  P LV IF 
Sbjct: 13  VLIKGTGYTVFFALSTMVLGLLLGFVVALVRIARVPLLAPLLAFYVSVMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  + SV    +        + LN
Sbjct: 73  IYYGLPSVGIEFEPVTAGVLSLTLN 97


>gi|51892199|ref|YP_074890.1| glutamine ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855888|dbj|BAD40046.1| glutamine ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 218

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 14/228 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +      L      +    K+   S + G +L      L+R            LY++ F
Sbjct: 4   FIEHTLNILPVLFEGLGVTLKLTALSALFGTLL-GLLAALARISRNPLFTVPATLYVNLF 62

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G P L+ +   Y       +L Q            F +  +  S  + A+IAEI+R+
Sbjct: 63  --RGTPLLLQLLFIYNALPQLGLLIQ-----------PFPAAVLGYSLNSGAYIAEIIRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++ RGQMEAA +LG+++  A R ++LPQ  R ++PP+ ++   L K++SLA  +   
Sbjct: 110 AIQSIDRGQMEAARSLGMSYGLAMRRIILPQTYRRLLPPMVNELSALTKDTSLASTISIL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L+      +++T  A +  +     YL +++ ++   +RL  K+  +
Sbjct: 170 ELMKYSSQFVSRTNLAWQTYVWTAAFYLVVTMTLSALASRLEKKLEAR 217



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +  G   T  L     +  T++G L    R+S N L      +YV +FR  P L+
Sbjct: 10  NILPVLFEGLGVTLKLTALSALFGTLLGLLAALARISRNPLFTVPATLYVNLFRGTPLLL 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            + F+Y ++  +  +         G  LN
Sbjct: 70  QLLFIYNALPQLGLLIQPFPAAVLGYSLN 98


>gi|319651742|ref|ZP_08005868.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
 gi|317396561|gb|EFV77273.1| amino acid ABC transporter [Bacillus sp. 2_A_57_CT2]
          Length = 215

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 16/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              +             M    ++ + +  + I + LF   L +    K  + +  +YI 
Sbjct: 1   MDLLTKFMDTYPVFLKGMLLTFQLTIVAVFIAIFIGLFFAFL-KISRIKVLEWIADIYI- 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            FL+ G P +V I + Y             F   +    +F S+ + L+ +  A+IAEI 
Sbjct: 59  -FLVRGTPLVVQIFIFY-------------FGLTALDISQFWSVVLGLAFHNGAYIAEIF 104

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + ++ +GQMEA  +LG+T   A R ++LPQA R  +PPL +Q++  LK+SSLA  +G
Sbjct: 105 RGSIQSIDKGQMEAGRSLGMTAGLAMRRIILPQAFRRAMPPLGNQFIIALKDSSLASFIG 164

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L +V  T  +     +  +LI    YL L ++ ++ +N +  ++A  +
Sbjct: 165 MYELFNVATTYGSNEYDYMSYLLIVAVYYLVLVLIFSILVNMIEKRMASSD 215



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 3/159 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G + TF L    +  A  IG      ++S  K++ WI  +Y+ + R  P +V IF 
Sbjct: 13  VFLKGMLLTFQLTIVAVFIAIFIGLFFAFLKISRIKVLEWIADIYIFLVRGTPLVVQIFI 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLSLFATR 206
            Y  + ++      S+VL                ++ +  K        LG+   L   R
Sbjct: 73  FYFGLTALDISQFWSVVLGLAFHNGAYIAEIFRGSIQSIDKGQMEAGRSLGMTAGLAMRR 132

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +     +   +A+P L     +     +L      Y+L 
Sbjct: 133 I--ILPQAFRRAMPPLGNQFIIALKDSSLASFIGMYELF 169


>gi|327331111|gb|EGE72851.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Propionibacterium acnes HL097PA1]
          Length = 314

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 13/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +  +     +++ V  +  +       ++L  R +   T    T    F  + +LG  ++
Sbjct: 24  IAAVIVTMLALVFVQGLVTNPNYQWPVVWLYLRDVKVITGIGYTIVLTFA-AMLLGTAVA 82

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--------GQ 253
           L    + R       + +   YI  F+  G+P    +     L    P L         Q
Sbjct: 83  LL-MAMMRQSRNPVLRGVSRAYI--FVFRGVPVYTQLVFWGLLAVLYPTLSIGVPFSGPQ 139

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
              I    V     +  I L     A++AEI+RSGL +V  GQ EAA ALG+      R 
Sbjct: 140 LASIETKKVVTALAAAIIGLGLNEGAYLAEIIRSGLESVDAGQSEAAKALGMKPSLIMRR 199

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMF 372
           V++PQAMR IIPPL ++ + +LK +SL +AV F  DL      I N+    I ++++  F
Sbjct: 200 VIIPQAMRVIIPPLGNETIGMLKTTSLVLAVPFTLDLQYATSAIANRIYAPIPLLIVAAF 259

Query: 373 IYLSLSIMIALFMNRLNAKIALK 395
            YL ++ ++ +  + L       
Sbjct: 260 WYLVVTSVLMIGQHFLEHYFGRG 282



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L F+ M+  T +  L+   R S N ++  + R Y+ VFR +P    + F  
Sbjct: 61  ITGIGYTIVLTFAAMLLGTAVALLMAMMRQSRNPVLRGVSRAYIFVFRGVPVYTQLVFWG 120

Query: 150 KSVLSVL 156
              +   
Sbjct: 121 LLAVLYP 127


>gi|238762102|ref|ZP_04623075.1| Arginine transport system permease protein artQ [Yersinia
           kristensenii ATCC 33638]
 gi|238699830|gb|EEP92574.1| Arginine transport system permease protein artQ [Yersinia
           kristensenii ATCC 33638]
          Length = 238

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V + VLG+VL++       +R     +  TG     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALVLGLVLAMLFAVCESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNIDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 IGQWESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYMIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|110807126|ref|YP_690646.1| putative transport system permease [Shigella flexneri 5 str. 8401]
 gi|110616674|gb|ABF05341.1| putative transport system permease protein [Shigella flexneri 5
           str. 8401]
          Length = 367

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V   +Y     +  +                     T
Sbjct: 125 -----------YIAAWAVIYPLIVWRLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L++RK   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALSYRKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|331664879|ref|ZP_08365784.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA143]
 gi|331058127|gb|EGI30109.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Escherichia coli TA143]
          Length = 367

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  + PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVMYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|242241097|ref|YP_002989278.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133154|gb|ACS87456.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 221

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   + +   S  +  +     + + SF+LG+ + +    L R +  K  K     Y
Sbjct: 1   MPSWLQLMADSFWSLLSAGIQFTVPLAILSFILGLAVGVIV-ALLRLYGPKPLKWFCDFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  +    A+ +E
Sbjct: 60  V--WVIRGTPLLVQLFLIFY-----------GLPNAGITLDAFPAALIGFTLNVGAYTSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  +++VP+GQ  AA +LG+   +A R V++PQ++   +PPL++ +++L+K++SLA  
Sbjct: 107 IVRGAILSVPKGQWNAAYSLGMNGAQAIRWVIVPQSVFVSLPPLSNTFISLIKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I++ T + + + +    IYL  S  +     RL      
Sbjct: 167 ITVPEMFLAAQRIVSVTYEPLILYVEAALIYLLFSTFLGKIQVRLEKYYQR 217



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+ + +  G   T  LA    I    +G +V   RL   K + W C  YV V R  P 
Sbjct: 9   ADSFWSLLSAGIQFTVPLAILSFILGLAVGVIVALLRLYGPKPLKWFCDFYVWVIRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + +     D       G  LN
Sbjct: 69  LVQLFLIFYGLPNAGITLDAFPAALIGFTLN 99


>gi|259046528|ref|ZP_05736929.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Granulicatella
           adiacens ATCC 49175]
 gi|259036693|gb|EEW37948.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding protein/permease protein [Granulicatella
           adiacens ATCC 49175]
          Length = 259

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 88/175 (50%), Gaps = 10/175 (5%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+ +L   T    G P +V   + Y              + G  +   F +++I  S  T
Sbjct: 63  AVVILNCYTEFFRGTPMIVQAMVIYY---------GTALMFGINLDVTFAAIFIV-SINT 112

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+++EIVR G+I++ +GQ EA+ A+G+TH +  R V+ PQ +R+I+P + ++++  +K+
Sbjct: 113 GAYMSEIVRGGIISIDQGQFEASQAIGMTHWQTMRYVVFPQVLRNILPAVGNEFVINIKD 172

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +S+   +  ++L     T+  Q  +  +   + + +Y  ++  +   +     K+
Sbjct: 173 TSVLNVISVSELYFATKTVAGQNFRYFDTFFVTLILYFIMTFTVTRILRYFERKL 227


>gi|227112141|ref|ZP_03825797.1| octopine transport system permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|227326810|ref|ZP_03830834.1| octopine transport system permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 244

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V S  LG  L+L    L +       +++   Y+  F   G P LV + L Y 
Sbjct: 18  PLTLQLAVSSVFLGFFLALGL-ALMQLSSFAVLRSIARTYVLFF--RGTPLLVQLFLIYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF ++  S + P          ++LS  T A+ +EI+R GL +VP GQ+E+
Sbjct: 75  ------GLGQFTWVRESMLWPFLREPHWCALLSLSLCTGAYASEIIRGGLQSVPVGQIES 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A G+      + ++ P A+R  +P   ++ ++++K++SLA  +   ++  +   +I +
Sbjct: 129 ARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKSTSLASIITLMEITGIAARLIAE 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           T +A+E+ L+   IYL +++++   +    
Sbjct: 189 TYRALEVFLVAGAIYLFINLILTRLLMWTE 218



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  LA S +     +   +   +LS+  ++  I R YV  FR  P LV +F +
Sbjct: 13  IIPGIPLTLQLAVSSVFLGFFLALGLALMQLSSFAVLRSIARTYVLFFRGTPLLVQLFLI 72

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 73  YYGLGQF 79


>gi|150019161|ref|YP_001311415.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149905626|gb|ABR36459.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 235

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 4/210 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               +  VF F L I+L LF   + R    K  +   L+++    I G P LV +   Y 
Sbjct: 25  WVVVQATVFGFFLAIILGLFI-AIGRISKIKILRGFLLVFLEF--IRGTPLLVQLVYMYY 81

Query: 244 L-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +      ++ Q    G        ++  I L      +I+E++RS ++++  GQ EAA+A
Sbjct: 82  VVPLLVSIIVQIWNPGYQFKISSLVAGTIGLGINYGCYISEVIRSSILSIDGGQTEAALA 141

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGLT+ +    +++PQA+R++IP   +  + +LK++SL   V  ++L+    +  +Q+  
Sbjct: 142 LGLTNNQTMFRIIIPQALRNVIPVFGNYLVMMLKDTSLLAYVSVSELLLRTQSYASQSFL 201

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            IE   I    YL LS+ +A  +  +  K+
Sbjct: 202 TIESYTILAGFYLILSLPLAQLVKLVEKKM 231



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G          G   A I+G  +  GR+S  K++     V++E  R  P LV + ++Y 
Sbjct: 22  AGLWVVVQATVFGFFLAIILGLFIAIGRISKIKILRGFLLVFLEFIRGTPLLVQLVYMYY 81

Query: 151 SVLSVLPIPDHSIVLPFGM 169
            V  ++ I        +  
Sbjct: 82  VVPLLVSIIVQIWNPGYQF 100


>gi|295398549|ref|ZP_06808582.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Aerococcus viridans ATCC 11563]
 gi|294973213|gb|EFG49007.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Aerococcus viridans ATCC 11563]
          Length = 217

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 10/209 (4%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            + + V+ ++ SL    L   F     K L  +       F    L++I + + +     
Sbjct: 19  TLIASVIALIASLILGGLVGIFQTLDNKVLAKIGDIYVEFFRNIPLLIIVMFFYVVIPLY 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            +              F S  I L+ YT+AFIA++VRSG+ AVP GQ EAAI+ G+T+ +
Sbjct: 79  GMD----------ITGFQSGIIGLTLYTSAFIADVVRSGIDAVPEGQKEAAISQGMTYVQ 128

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + V+LPQA++ +IPPL +Q++NL+KNSS+   V   DL+  G  I ++T   +    +
Sbjct: 129 TMQYVVLPQAVKIVIPPLGNQFINLVKNSSILAMVAGLDLMYYGDLIASETFNTLGTYTM 188

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +YL +++ + L ++ +  ++A ++ +
Sbjct: 189 IAGMYLVITVPLTLLVSYIEKRLAQQDVR 217



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 51/109 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   ++Y+  I+ GF+NT   +   +I + I+G LVG  +   NK++A I  +YVE FRN
Sbjct: 2   FELLTNYSDLIIEGFINTLIASVIALIASLILGGLVGIFQTLDNKVLAKIGDIYVEFFRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           IP L+++ F Y  +               G+ L         +    +A
Sbjct: 62  IPLLIIVMFFYVVIPLYGMDITGFQSGIIGLTLYTSAFIADVVRSGIDA 110


>gi|238020541|ref|ZP_04600967.1| hypothetical protein GCWU000324_00427 [Kingella oralis ATCC 51147]
 gi|237867521|gb|EEP68527.1| hypothetical protein GCWU000324_00427 [Kingella oralis ATCC 51147]
          Length = 227

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 94/212 (44%), Gaps = 13/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              FV   ++ ++++         +  +    L +  +   +I G P LV +A+ +   +
Sbjct: 29  VASFVCGMMIAVIVAFVRVMPQGGWLHRI--FLAVFRVYISIIRGTPMLVQLAVIF---Y 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +  +             +  IA S    A+ +E VR+ +++VP+GQ EA  ++G+T
Sbjct: 84  GLPAMNIYF--------TPIPAAIIAFSLNVGAYGSETVRAAILSVPKGQWEAGFSIGMT 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R +++PQA+R  +PPL++ ++ L K +SLA  V   +L        N     + +
Sbjct: 136 YMQTFRRIIVPQALRVAVPPLSNSFIGLFKETSLASFVTVTELFRTAQQYGNVGYDFLPV 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   FIY     ++ +   RL         +
Sbjct: 196 YIEAGFIYWMFCWVLFVTQARLEKHFDRHVAR 227


>gi|254255035|ref|ZP_04948352.1| ABC-type arginine transport system permease component [Burkholderia
           dolosa AUO158]
 gi|124899680|gb|EAY71523.1| ABC-type arginine transport system permease component [Burkholderia
           dolosa AUO158]
          Length = 293

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +  K+L   Y  T LI  +P LVL+ 
Sbjct: 75  WAGTVETVKLAVLSLAASLVLGLAGAA-AKLSTSRMLKSLGTFY--TTLIRAVPDLVLML 131

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F +  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 132 LLFYGIQILLNDATDLLGREQIDIDPFAAGVVTLGFIYGAYFTETFRGAFLAVPRGQLEA 191

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +  R +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 192 GFAYGMSGWRVFRRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 251

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ M  + + RL+ + ++  ++
Sbjct: 252 TLDFFFFTLAAGAIYLAITTMSNVVLYRLDKRYSIGVRR 290


>gi|149909992|ref|ZP_01898641.1| amino acid ABC transporter, permease protein [Moritella sp. PE36]
 gi|149807006|gb|EDM66965.1| amino acid ABC transporter, permease protein [Moritella sp. PE36]
          Length = 254

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              K+ +FS V+ ++L L  T ++R+   K    L + Y  T L+ G+P LVL+ L Y  
Sbjct: 17  LTVKLAIFSLVIAVLLGLI-TAVARYSGGKISSVLAVSY--TSLVRGVPDLVLMMLIYFG 73

Query: 243 ------------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                                    +      L  F   G      EF +  + +     
Sbjct: 74  LQVGLNNFSEWLYELHETYAINAFYIEHGWLTLSAFYEDGMYFNIDEFSAGVLTIGFIFG 133

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++ E  R  L++V +GQ+EAA A G++  +    V+ PQ MR  +P + + +L L+K +
Sbjct: 134 AYMGETFRGALLSVDKGQLEAATAYGMSDWQVFHRVMFPQMMRFALPGIGNNWLVLVKTT 193

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L   +G +D+V +       T +     +   F+YL+++ +  + +  L    +
Sbjct: 194 ALVSIIGLSDMVKLAKEAAMTTFEPFLFFIPVAFVYLAITTVSEIVLKYLERHFS 248



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  G + T  LA   ++ A ++G +    R S  K+ + +   Y  + R +P LV+
Sbjct: 7   YGPGIFNGAILTVKLAIFSLVIAVLLGLITAVARYSGGKISSVLAVSYTSLVRGVPDLVL 66

Query: 145 IFFLYKSV 152
           +  +Y  +
Sbjct: 67  MMLIYFGL 74


>gi|307323373|ref|ZP_07602583.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306890862|gb|EFN21838.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 334

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 14/269 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +     +      V SV+        +    F     L    LT+     + V  F+L
Sbjct: 42  RRLTAAAALLVFAMVVNSVVRNDAFQWDVVGRYFTTGAVLDGLLLTLWLTGAVMVLGFLL 101

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFDKP 249
           GI L++      R         L   Y+  F     P LV +   +        L    P
Sbjct: 102 GIPLAVM-----RLSTNPVLSILSWGYVWIF--RSTPLLVQLLFWFNIGALYPTLGLGLP 154

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              QF  +    +    ++  I L+ + AA+ AE++R G+++V  GQ EAA ALGL  R+
Sbjct: 155 FGPQFVTVKTVNLLGPTLTAVIGLTLHEAAYAAEVIRGGILSVDSGQTEAAQALGLGRRR 214

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQAMRSI+P   +  +  LK +S+   +   DL+     + NQ+ Q I ++++
Sbjct: 215 TLRRIVIPQAMRSIVPTAGNMLIGTLKGTSIVSVLAVHDLLYSVQLVYNQSYQVIPLLMV 274

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               Y++++ +++     +    A    +
Sbjct: 275 ATLWYIAVTTVLSAGQFYVERYYARGAAR 303



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           M+   ++G  +   RLS N +++ +   YV +FR+ P LV + F +   
Sbjct: 95  MVLGFLLGIPLAVMRLSTNPVLSILSWGYVWIFRSTPLLVQLLFWFNIG 143


>gi|21492784|ref|NP_659859.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|21467209|gb|AAM54872.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 249

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 5/207 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S   G  +S+    L R        A  L Y   F   G P LV + L Y  
Sbjct: 19  LTLVLTFASLAAGFAVSVPLAFL-RASSNPWASAPVLAYTYAF--RGTPLLVQLFLIYYG 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P++ Q      + +   F   +IA +  +AA   E+VR G+ AVPRGQ+EAA ALG
Sbjct: 76  IGQLPLVRQSFL--WAVMREPFWCAFIAFTLNSAAHTTEVVRGGIQAVPRGQIEAAKALG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     RL++ P  +R  +P   ++ + +LK SSLA  +   ++  +   ++++T    
Sbjct: 134 LSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLVSETFAPY 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E+ +     YL L+++I      L  +
Sbjct: 194 EVFIAAGAFYLLLTLLITQGFQMLETR 220


>gi|70733846|ref|YP_257486.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68348145|gb|AAY95751.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 230

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 2/187 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    K  + L   Y  + ++ G+P L+ + L Y    +       +F         F++
Sbjct: 41  KTSPYKPLRWLGETY--STIVRGVPELLWVLLIYYGTVNMMSALGEHFGNPDLALSPFLA 98

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL     A+  E+ R  ++A+P+G  EA  ALGL+  +    ++LPQ  R  +P L 
Sbjct: 99  GVIALGLCFGAYATEVFRGAILAIPKGHREAGTALGLSKFRIFSRLILPQMWRIALPGLG 158

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + ++ L+K+++L   +G  +++      +          ++  F+YL L+++    M+ L
Sbjct: 159 NLFMILMKDTALVSVIGLEEIMRHAQNAVTFAKHPFTFFMVAAFMYLGLTVLAMTGMHFL 218

Query: 389 NAKIALK 395
             + A  
Sbjct: 219 EKRAARG 225


>gi|332088879|gb|EGI93991.1| arginine transport system permease protein artQ [Shigella boydii
           5216-82]
          Length = 238

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+ +ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 MGQWESGLALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|295694800|ref|YP_003588038.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295410402|gb|ADG04894.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 224

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 14/227 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           ++  +     T++ +    V   VLG++ +LF     R    +  +AL  +Y+  F   G
Sbjct: 11  SSMLIKGLGYTLEYSLYAVVLGTVLGLIFALF-----RLSGSRILRALGTVYVDIF--RG 63

Query: 232 LPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            P LV I   Y  L    P+   F            ++L         A+I EI+R+G++
Sbjct: 64  TPLLVQIFFIYFGLPQVLPLHQWFGEFYTVLAGAAALAL------NEGAYITEIIRAGIL 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQ EAA ++G+T  +  R ++LPQA + +IPPL +Q++  +K++SL   +   +LV
Sbjct: 118 SVDKGQWEAAESIGMTSYQKMRYIILPQAFKRMIPPLVNQFIQTIKDTSLLSVISITELV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +I  T  A++       +YL + +++      L  ++ + ++
Sbjct: 178 RAAQIVIVTTYFALQFWTAVAVLYLIVILLLTKLSQYLERRLQVDQR 224



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 45/106 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T   +   ++  T++G +    RLS ++++  +  VYV++FR  P LV IFF+
Sbjct: 14  LIKGLGYTLEYSLYAVVLGTVLGLIFALFRLSGSRILRALGTVYVDIFRGTPLLVQIFFI 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           Y  +  VLP+          +             +    +  + S 
Sbjct: 74  YFGLPQVLPLHQWFGEFYTVLAGAAALALNEGAYITEIIRAGILSV 119


>gi|323172273|gb|EFZ57911.1| glutamine transport system permease protein glnP [Escherichia coli
           LT-68]
          Length = 219

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIASNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|322418599|ref|YP_004197822.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320124986|gb|ADW12546.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 233

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 111/234 (47%), Gaps = 9/234 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-Y 223
           L F + ++N                   +  L ++  + +          +     ++ Y
Sbjct: 5   LNFQVVIDNFTYFMIGRYPSGPLGGLGLTMYLAVISCILSFFGGLILGLLSLSRFAVIRY 64

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                I  +  L L+ + + ++F  P L            PE  ++ + L+ +T+A++++
Sbjct: 65  PVNLFINTIRGLPLLMVIFWMYFLLPALMG-------RTVPEATTVIMGLTLFTSAYMSQ 117

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR+G+  +P+GQ EAAI+ GL   +A   ++LPQ +R++IP   +Q+++L+K++SLA  
Sbjct: 118 IVRAGIQGIPKGQTEAAISTGLKPWQAMLYIVLPQGLRNMIPSFVNQFVSLIKDTSLAFI 177

Query: 344 VGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           VG ++L  VG  I N+T     EI +    +Y  L      F   L  ++A ++
Sbjct: 178 VGVSELTHVGTQINNRTMAYPTEIFIFIAAVYFVLCFAFTSFSRWLEGRLAWRK 231


>gi|148543337|ref|YP_001270707.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184152747|ref|YP_001841088.1| glutamine ABC transporter substrate binding and permease components
           [Lactobacillus reuteri JCM 1112]
 gi|227364409|ref|ZP_03848499.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325683609|ref|ZP_08163125.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530371|gb|ABQ82370.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Lactobacillus reuteri DSM 20016]
 gi|183224091|dbj|BAG24608.1| glutamine ABC transporter substrate binding and permease components
           [Lactobacillus reuteri JCM 1112]
 gi|227070502|gb|EEI08835.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324977959|gb|EGC14910.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 487

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T++      +F+ + G++L +     ++  +           +S+ LI+ 
Sbjct: 283 YPALLRGLWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANA----------VSSTLIYI 332

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              + +I L + ++   P     N IG     P F++  + L+    A+I  IV+ G  +
Sbjct: 333 FRGIPMIVLAFFIYMGIP-----NVIGHKV--PLFLAGILTLTFNEGAYIGAIVKGGFES 385

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA +LGL + KA   V+ PQ  + +IP L +Q++  LK++S+  A+G  +L  
Sbjct: 386 VNIGQWEAARSLGLPYSKALIKVIAPQGFKLMIPSLVNQFIITLKDTSILSAIGVMELTQ 445

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II+Q  +  ++ LI   +Y+ +  ++    N +  ++ 
Sbjct: 446 TGTVIISQNMEGFKMWLIIGTMYIIIITLLTWLSNYVQKRMG 487



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L   G+I A I G ++G   ++ NK    +    + +FR IP +V+ FF
Sbjct: 285 ALLRGLWMTIELTVVGIIFAMIFGVILGVLGIAQNKFANAVSSTLIYIFRGIPMIVLAFF 344

Query: 148 LYKSVLSVLPI 158
           +Y  + +V+  
Sbjct: 345 IYMGIPNVIGH 355


>gi|254473626|ref|ZP_05087022.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211957338|gb|EEA92542.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 274

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 107/255 (41%), Gaps = 8/255 (3%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           ++L  S +  +              +         +T+      F  +   G+ +++   
Sbjct: 16  WWLLASFVLAVFFLWLIAANGDYRQIFMTLFKGVGITLFVTFVSFFIASFFGLFIAIGRG 75

Query: 206 RLSRH------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
              R       F+ +  + +P+L +  ++ F       +   Y       +  +      
Sbjct: 76  SKHRIIREMCSFYTEIMRGVPMLVLLFYIAFVGA--PQMVAAYNWIMTPLIELEIIDKLR 133

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                      IALS   +AFIAEI R+G+ +V  GQ+EA  ALGL+     R ++ PQA
Sbjct: 134 VRDLSMMWRAIIALSLGYSAFIAEIFRAGIESVDEGQLEAGRALGLSRWHTFRFIIWPQA 193

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+PPL + ++ L+K S+L   +G  D+  +G      T Q  E   +  ++YL +++
Sbjct: 194 FKNILPPLGNDFIALIKESALVSVLGVQDITQLGKIYSASTFQFFETYNVVAYLYLIMTV 253

Query: 380 MIALFMNRLNAKIAL 394
            ++L +  L  ++  
Sbjct: 254 SLSLVVRGLERRMKR 268



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 2/153 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                +  G   T ++ F     A+  G  +  GR S ++++  +C  Y E+ R +P LV
Sbjct: 40  QIFMTLFKGVGITLFVTFVSFFIASFFGLFIAIGRGSKHRIIREMCSFYTEIMRGVPMLV 99

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++F++       +    + I+ P         L    L+M   A I +       +  +F
Sbjct: 100 LLFYIAFVGAPQMVAAYNWIMTPLIELEIIDKLRVRDLSMMWRAIIALSLGYSAFIAEIF 159

Query: 204 ATRL--SRHFHEKTGKALPLLYISTFLIFGLPT 234
              +        + G+AL L    TF     P 
Sbjct: 160 RAGIESVDEGQLEAGRALGLSRWHTFRFIIWPQ 192


>gi|163789546|ref|ZP_02183984.1| hypothetical protein CAT7_08890 [Carnobacterium sp. AT7]
 gi|159875078|gb|EDP69144.1| hypothetical protein CAT7_08890 [Carnobacterium sp. AT7]
          Length = 226

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 14/234 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   L    + +    +     I + S + G VL      + R  + K  + +  
Sbjct: 5   QWQYIFDPALAFDSVGYILKGLGYTLGISLASMIFGTVLGFLL-AIMRMSNSKILRIIAR 63

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS   + G PTLV + + Y           F F           +  I  S  +AA+ 
Sbjct: 64  TYISF--MRGTPTLVFLFILY-----------FGFPFIGIQFEAVNAAIIGFSLSSAAYS 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+RS L +V  GQ EAA ALGL      R V++PQAMR  +PP+++  L+L+K +SLA
Sbjct: 111 AEIIRSSLHSVDHGQWEAAYALGLKWPFIMRKVIIPQAMRIAVPPMSNVLLDLIKGTSLA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   ++      +  +    + + ++   IY ++  +  +F N L  K +L 
Sbjct: 171 AMITVPEIFQQAKIVGGREFDYMTMYILVALIYWAICSVFTIFQNYLEKKTSLY 224



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 44/100 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G   T  ++ + MI  T++G L+   R+S +K++  I R Y+   R  P LV +F 
Sbjct: 21  YILKGLGYTLGISLASMIFGTVLGFLLAIMRMSNSKILRIIARTYISFMRGTPTLVFLFI 80

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           LY     +    +       G  L++   S   +    ++
Sbjct: 81  LYFGFPFIGIQFEAVNAAIIGFSLSSAAYSAEIIRSSLHS 120


>gi|284923284|emb|CBG36378.1| ABC transporter, permease protein [Escherichia coli 042]
          Length = 368

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  + PL+V + +Y     +  +                     T
Sbjct: 126 -----------YIAVWAVMYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|262191302|ref|ZP_06049495.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|262032798|gb|EEY51343.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
          Length = 225

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 97/217 (44%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   S V+G++ ++    ++R+  +K        YI    + G P L
Sbjct: 10  LPIYLSGLWTTVWLVSLSLVIGLLCAIPL-AITRNSKQKWFSLPAWGYIYF--LRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + Q+  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I     +   + 
Sbjct: 181 VNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRF 217



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 33/102 (32%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++   +    +   R S  K  +     Y+   R  P LV ++ +
Sbjct: 13  YLSGLWTTVWLVSLSLVIGLLCAIPLAITRNSKQKWFSLPAWGYIYFLRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|260870021|ref|YP_003236423.1| putative transport system permease protein [Escherichia coli
           O111:H- str. 11128]
 gi|257766377|dbj|BAI37872.1| putative transport system permease protein [Escherichia coli
           O111:H- str. 11128]
          Length = 367

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRRRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|227114736|ref|ZP_03828392.1| amino-acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 223

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L + + +  + L +   T+        F+ VLG++L+L      R         +  LYI
Sbjct: 5   LAYLLKVFPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+P+LV + + Y   F  P L       G +      +  I  S  T+A++AEI
Sbjct: 60  SLF--RGIPSLVQLFIIY---FGLPQL-----FPGLSNLDAMTAAIIGFSLKTSAYMAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL +V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+
Sbjct: 110 FRAGLASVDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ++L + G  I  ++ +  E  L+   IY  + I+ +    +L  K+    ++
Sbjct: 170 GVSELFAEGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKLNHSLQR 223



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T +LA   M  A ++G ++   R S   +V  I  +Y+ +FR IP LV +F +Y  +
Sbjct: 19  LPTTLFLAVVSMFFAMVLGLILALVRESKIVVVVKIVELYISLFRGIPSLVQLFIIYFGL 78

Query: 153 LSVLP 157
             + P
Sbjct: 79  PQLFP 83


>gi|45358114|ref|NP_987671.1| binding-protein dependent transport system inner membrane protein
           [Methanococcus maripaludis S2]
 gi|44920871|emb|CAF30107.1| Binding-protein-dependent transport systems inner membrane
           component [Methanococcus maripaludis S2]
          Length = 219

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 13/224 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            ++    + F    +    KI + SF+L +++++           KT   + + Y+  F 
Sbjct: 3   FYIVFDNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVF- 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P L+ +   Y                         +  + LS    A+I+EI+R+ 
Sbjct: 62  -RGTPLLIQLFFIYY-----------GLPSIGITMSSTFAAVLGLSLNGGAYISEIIRAA 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP GQ EAA +LG+   ++   ++LPQA R  IPPL + + ++LK SSL   +   +
Sbjct: 110 IQSVPVGQFEAAESLGMGKIESMVYIVLPQAFRITIPPLVNSFSSILKESSLISVLAITE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L  +G  I  +T +  EI L    IYL L  +I++   ++  K+
Sbjct: 170 LTRIGQLIYTRTSRPFEIYLTIGLIYLILVSIISIGSWKIEKKL 213



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           I+     T  +     + A II  LVG+ R     K +  +   YVEVFR  P L+ +FF
Sbjct: 13  IIDAVFVTLKITIMSFLLAVIIAVLVGSTRAMNFSKTLDLVLMAYVEVFRGTPLLIQLFF 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  + S+      +     G+ LN
Sbjct: 73  IYYGLPSIGITMSSTFAAVLGLSLN 97


>gi|88596128|ref|ZP_01099365.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|88190969|gb|EAQ94941.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 84-25]
          Length = 250

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 18/252 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L  I   +         P         +   +  ++    T++ +    + + + G +  
Sbjct: 11  LRQILTSWGLYDENSISPFAVWKFLDALDNKDAFINGFIYTLEVSILALLIATIFGTIGG 70

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           + A         K  +A   +Y+  F         L+   + L +  PVL          
Sbjct: 71  VMA-----TSRFKIIRAYTRIYVELFQNVP-----LVIQIFFLFYALPVL--------GI 112

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F    + +  Y  A+++E+VRSG++AVPRGQ EA+ + G T+ +  R +++PQ +R
Sbjct: 113 RLDIFTIGVLGVGVYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIR 172

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP+T+Q +NL+KN+S+ + VG A+L+    +     G      +    +Y  +   +
Sbjct: 173 IILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAAVLYFIICYPL 232

Query: 382 ALFMNRLNAKIA 393
           A F      K+ 
Sbjct: 233 AYFAKAYENKLK 244



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 48/87 (55%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A + GF+ T  ++   ++ ATI GT+ G    S  K++    R+YVE+F+N+P ++ IF
Sbjct: 42  DAFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIF 101

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           FL+ ++  +    D   +   G+ + +
Sbjct: 102 FLFYALPVLGIRLDIFTIGVLGVGVYH 128


>gi|218560339|ref|YP_002393252.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218367108|emb|CAR04882.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|323951210|gb|EGB47085.1| inner membrane transport system [Escherichia coli H252]
          Length = 367

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L    R  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRSR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|332098839|gb|EGJ03796.1| general L-amino acid transport system permease protein aapM
           [Shigella boydii 3594-74]
          Length = 367

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+         +L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLVLLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|71903839|ref|YP_280642.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|71802934|gb|AAX72287.1| arginine transport system permease protein [Streptococcus pyogenes
           MGAS6180]
          Length = 228

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 118/232 (50%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F             +T+  +  +  F  ++G++++L      +  H K    +  L
Sbjct: 1   MDLSFLPKYWAYFNYGVLVTIMISVSVVFFGTLIGVLVTLI-----KRSHVKPLTWVVNL 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+      F  +         +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMHFNNMPTIGFGVLDLD--FSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++ ++K+S+  
Sbjct: 112 SEIVRAGIEAVPKGQLEAAYSLGIRPQNAMRYVILPQAFKNILPALGNEFITIIKDSAFL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  +L +   +++  T   I  +L+  F YL ++ ++A  +  L   +A
Sbjct: 172 QTIGVMELWNGAQSVVTATYSPISPLLVAAFYYLMVTTVMAQLLAVLERHMA 223



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++ S +   T+IG LV   + S  K + W+  +YV +FR  P +V 
Sbjct: 9   YWAYFNYGVLVTIMISVSVVFFGTLIGVLVTLIKRSHVKPLTWVVNLYVWIFRGTPMVVQ 68

Query: 145 IFFLYKSV 152
           I   +  +
Sbjct: 69  IMIAFAWM 76


>gi|329295877|ref|ZP_08253213.1| glutamine ABC transporter permease protein [Plautia stali symbiont]
          Length = 219

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L            I +   + G+V+ L A   +R +       + L++I
Sbjct: 1   MEFDWSVIWPVLPILIEGAKMTLLISILGLIGGLVIGLVAG-FARAYGGWITNNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIVVQVMFIY---FALPMAFP------DLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINKGFREAGLALGLSRRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + R+  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRVKI 218


>gi|116511754|ref|YP_808970.1| ABC-type amino acid transport system, permease component
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116107408|gb|ABJ72548.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 295

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 97/249 (38%), Gaps = 6/249 (2%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             ++    +        F      S          K+   S  + I+  +F   L     
Sbjct: 25  FLLIKGQYNFHDFWTMFFTKIFSWSAFVDAFVPIIKMIPSSLEMTIIAMIFGLLLGLILA 84

Query: 213 EKTGKALPLLYISTFL----IFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266
                 +P+L     L    I G P LV + L Y       K +   +         P  
Sbjct: 85  LVRINKIPILNQLRALFVSFIRGTPILVQLYLSYTGIPLILKAINMNYGTNYNVNTIPAM 144

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           + + +A +    A+ +E +R+ + +V +GQ+EAA +LG+T+ +    V L +A      P
Sbjct: 145 LFVIVAFALNEGAYNSETIRAAIQSVDKGQIEAAKSLGMTNFQVFMRVTLSEAATVATAP 204

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + LLK++SLA   G  ++ +    I   T +  E  L    +Y  + I+  + + 
Sbjct: 205 LGNALIGLLKSTSLAFVAGVVEMTARAQIIGGSTFRLFETYLALALVYWPICIIFEILIR 264

Query: 387 RLNAKIALK 395
            L  K+ ++
Sbjct: 265 ALERKLDVR 273


>gi|260429682|ref|ZP_05783658.1| ABC transporter, membrane spanning protein (amino acid)
           [Citreicella sp. SE45]
 gi|260419165|gb|EEX12419.1| ABC transporter, membrane spanning protein (amino acid)
           [Citreicella sp. SE45]
          Length = 231

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 14/231 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             +  F      ++          + + S  LG+V       L R    +    +   Y 
Sbjct: 4   WNWDGFFEYLTNTYILEGAAVTLGLTIASMTLGVVAGCVV-ALMRMSPFRVLSNIA--YF 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T+LI G P LV + + Y      P +G    +          +  I L    AA+++EI
Sbjct: 61  YTWLIRGTPLLVQLIIIYT---GLPQIGIKFSV--------LEATLIGLVMNEAAYLSEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ +VP+GQ  AA A+G+T  +  R V+ PQA R IIPPL +     LK +S+A  +
Sbjct: 110 IRSGISSVPKGQSNAARAVGMTDVQMMRYVIAPQAARIIIPPLGNSVNGCLKTTSIASII 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +L+     +I +    +E+ ++    YL ++    L   R+       
Sbjct: 170 SMEELLRRTQVLIQEKFMVLELFVVAALYYLLMTTAWDLIQRRIERHFGRG 220



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T IL G   T  L  + M    + G +V   R+S  ++++ I   Y  + R  P LV +
Sbjct: 15  NTYILEGAAVTLGLTIASMTLGVVAGCVVALMRMSPFRVLSNIAYFYTWLIRGTPLLVQL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
             +Y  +  +            G+ +N
Sbjct: 75  IIIYTGLPQIGIKFSVLEATLIGLVMN 101


>gi|330989514|gb|EGH87617.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 248

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRL-----VSGIATVYVEVF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVEVFRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEVFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|310641777|ref|YP_003946535.1| sulfur-containing amino acid abc transporter, permease protein tcyl
           [Paenibacillus polymyxa SC2]
 gi|309246727|gb|ADO56294.1| Sulfur-containing amino acid ABC transporter, permease protein TcyL
           [Paenibacillus polymyxa SC2]
          Length = 259

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 6/193 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R ++    K +  +Y+S F   G P L+ + L Y   +  P L +   I  S+    
Sbjct: 43  ALPRMYNIPFLKRVSQVYVSFF--RGTPILIQLFLVY---YGLPELLKLVDI-NSSRWDV 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                   +  + AFI+EI+RSG+ AV RGQ+EAA ++G++  +    ++LPQA+  ++P
Sbjct: 97  LWFAVATYALNSGAFISEIIRSGVGAVDRGQIEAAQSVGMSGYQTFTRIILPQALAVVVP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             ++  +  LK++SLA  +G  ++     T+ + T   +E  +   FIYL +S+++    
Sbjct: 157 VFSNLVIGNLKDTSLAFTIGAMEMTGKSQTLGSATQHFVETYIALSFIYLVISLIVQKLF 216

Query: 386 NRLNAKIALKEKK 398
             L   +   E +
Sbjct: 217 KVLENTLLRHEHR 229



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 36/76 (47%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++  S ++   IIG LV   R+     +  + +VYV  FR  P L+ +F +Y  +  +
Sbjct: 24  TLFIVASSLVLGLIIGLLVALPRMYNIPFLKRVSQVYVSFFRGTPILIQLFLVYYGLPEL 83

Query: 156 LPIPDHSIVLPFGMFL 171
           L + D +      ++ 
Sbjct: 84  LKLVDINSSRWDVLWF 99


>gi|311279324|ref|YP_003941555.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308748519|gb|ADO48271.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 243

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 13/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F+ +FV G +L++    + R             YI  F   G P L+ + L Y 
Sbjct: 20  PVTLGLFISAFVCGGILAVGVLAM-RMSRWPLLSGFAKGYILVF--RGSPLLIQLFLIYY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S + P     F+   +ALS  TAA+ AEI+R  L+AVP GQ+EA
Sbjct: 77  ------GLGQFGVIRHSFLWPLLREPFICAVLALSLCTAAYTAEILRGALLAVPPGQIEA 130

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 131 GQACGMSRFLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T + +E+ L    IYL L+ +I      L  K+
Sbjct: 191 TYRTMEVFLCAAAIYLLLNFIIVQLYALLERKL 223


>gi|306833970|ref|ZP_07467094.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304423971|gb|EFM27113.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 234

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 104/240 (43%), Gaps = 15/240 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L+    P                      T+  +    + +FVLG++    ++  SR
Sbjct: 1   MFLLTAAASPFALSRWADFFANFGEFAKGFLYTLGMSICALILAFVLGVIFGAMSSSKSR 60

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                  KA+  +Y+  F     P LV     Y                G  +   F + 
Sbjct: 61  -----VLKAISRVYVEVF--QNTPLLVQFVFVYYGLAIM--------TNGVIMISTFFTA 105

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + +  Y  A+IAE++RSG+ AVP+GQ EAA++ G T+ +   L++LPQA+R+I+PPLT+
Sbjct: 106 VLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVRTILPPLTN 165

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q +NL+KN+S    +  AD++        +T   +        +Y  +   +A +  R  
Sbjct: 166 QVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYVPAFAGAALLYFIMCFPLATWARRKE 225



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 37/64 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +I A ++G + GA   S ++++  I RVYVEVF+N P LV   F+
Sbjct: 26  FAKGFLYTLGMSICALILAFVLGVIFGAMSSSKSRVLKAISRVYVEVFQNTPLLVQFVFV 85

Query: 149 YKSV 152
           Y  +
Sbjct: 86  YYGL 89


>gi|294492998|gb|ADE91754.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli IHE3034]
 gi|307625129|gb|ADN69433.1| putative transport system permease protein [Escherichia coli UM146]
 gi|323957582|gb|EGB53296.1| inner membrane transport system [Escherichia coli H263]
          Length = 367

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L    R  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRSR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|290968268|ref|ZP_06559811.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
 gi|290781750|gb|EFD94335.1| ABC transporter, permease protein [Megasphaera genomosp. type_1
           str. 28L]
          Length = 216

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 11/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFG 231
              +      +    ++ +  F + I+LSL F   LS     +      ++ I  +++ G
Sbjct: 1   MEYVWSIVPAIGAGLQVTLKIFCITIILSLPFGVLLSVGRTSRIWGIRKIIGIYIYIMRG 60

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P ++ I   Y             F+      P F +  IA     AA+ AEI R G+ +
Sbjct: 61  TPLMLQILFIYY---------GLPFLVDGLRLPPFGAAIIAFVLNYAAYFAEIFRGGIQS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ E A  LG+T+ +  R ++LPQ ++ ++PP+ ++ +NLLK++SL   +   D++ 
Sbjct: 112 IGRGQYEGAKVLGMTYGQTMRRIVLPQVVKCVLPPVANETINLLKDTSLVYILAMNDILR 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +I+ +        L+    YL  + ++      L  + ++ +
Sbjct: 172 ITRSIVQRDFDT-TAFLVAAVFYLVFTFILTRVFMYLEKRFSVYD 215



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S   AI  G   T  +    +I +   G L+  GR S    +  I  +Y+ + R  P +
Sbjct: 5   WSIVPAIGAGLQVTLKIFCITIILSLPFGVLLSVGRTSRIWGIRKIIGIYIYIMRGTPLM 64

Query: 143 VVIFFLYKSVL 153
           + I F+Y  + 
Sbjct: 65  LQILFIYYGLP 75


>gi|118470944|ref|YP_887549.1| amino acid ABC transporter permease [Mycobacterium smegmatis str.
           MC2 155]
 gi|118172231|gb|ABK73127.1| ABC-type amino acid transport system, permease component
           [Mycobacterium smegmatis str. MC2 155]
          Length = 310

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/272 (23%), Positives = 125/272 (45%), Gaps = 15/272 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +  +V++      +        +   + F    N R L+   L      ++ ++S +
Sbjct: 24  WRWVAAVVIVILAALFLYGAATNDSYRWPIYFEYLFNERVLTVGVLNT---LQLTIYSML 80

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-------YQLHFDK 248
           + IVL +    + R       +++   ++  ++  G P  V +            +    
Sbjct: 81  IAIVLGVLL-AVMRLSPNPVFRSVA--WVYLWIFRGTPVYVQLVFWGLLPTIYQNIQLGV 137

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F  +   ++S  F+   + L+   AA++AEI+R+G+ +VP GQMEA+ ALG++  
Sbjct: 138 PFGPSFFHLNLQSLSIPFLLAILGLALNEAAYMAEIIRAGISSVPEGQMEASTALGMSWG 197

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVG-GTIINQTGQAIEI 366
            A R  +LPQAMR IIPP  ++ +++LK +SL  AV F  DL  +    I  +  + + +
Sbjct: 198 LAMRRTVLPQAMRVIIPPTGNEIISMLKTTSLVTAVPFTLDLYGITSREIAARIFEPVPL 257

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L+    YL ++ ++ +    L    +    +
Sbjct: 258 LLVAATWYLVITSILMVGQYYLERYYSRGASR 289



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 47/115 (40%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             + VG +NT  L    M+ A ++G L+   RLS N +   +  VY+ +FR  P  V + 
Sbjct: 62  RVLTVGVLNTLQLTIYSMLIAIVLGVLLAVMRLSPNPVFRSVAWVYLWIFRGTPVYVQLV 121

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           F          I       P    LN + LS P L       +   +++  I+ +
Sbjct: 122 FWGLLPTIYQNIQLGVPFGPSFFHLNLQSLSIPFLLAILGLALNEAAYMAEIIRA 176


>gi|304415311|ref|ZP_07395996.1| permease component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
 gi|304282829|gb|EFL91307.1| permease component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
          Length = 509

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 21/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT------GKALPLLYISTFLIFGLP-TLVL 237
                 +F  VL ++ ++  +   +     T       + LP + +   + FG    L+L
Sbjct: 275 LALCALIFGLVLAVLFAVLESSGGKLCGYLTSSMVTLLRGLPEILVLLCIYFGSSHLLML 334

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI-------------AEI 284
           +   + L+F   +L     +G   VSP F+   IAL+                    ++ 
Sbjct: 335 LTDGFSLNFYLFILPVKFDLGTVDVSP-FLCGVIALAXXXXXXXXXXALALLYAAYASQT 393

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L AVP GQ E+A ALGL+  +    +++PQ  R  +P L +Q+L LLK+++L   +
Sbjct: 394 LRGALKAVPIGQWESAQALGLSQSRIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLI 453

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              DL+     I  +T +      I   +YL+++++    +  +  +    E+
Sbjct: 454 SVNDLMLQTKNIATRTQEPFTWYCIVALVYLAITLLSQYLIKLIVMRTTAFER 506


>gi|146318682|ref|YP_001198394.1| amino acid ABC transporter periplasmic protein [Streptococcus suis
           05ZYH33]
 gi|145689488|gb|ABP89994.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Streptococcus suis
           05ZYH33]
          Length = 179

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/176 (28%), Positives = 93/176 (52%), Gaps = 17/176 (9%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + +PL+ ++ F+ +G+P L+      Q   +                 +F++  IALS
Sbjct: 18  VVRGIPLMIVAAFIFWGIPNLIESMTGQQSPIN-----------------DFVAGTIALS 60

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             + A+IAEIVR G+ AVP GQMEA+ +LG+++    R ++LPQA + ++P   +Q++  
Sbjct: 61  LNSGAYIAEIVRGGIQAVPAGQMEASRSLGISYGTTMRKIILPQAGKIMLPNFINQFVIT 120

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           LK++++  A+G  +L   G  II +  Q+  +  I   IYL +  ++     +L  
Sbjct: 121 LKDTTIISAIGLVELFQAGKIIIARNYQSFRMYAILAIIYLVVITLLTRLARKLEK 176


>gi|50123003|ref|YP_052170.1| octopine transport system permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613529|emb|CAG76980.1| octopine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 244

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  LG  L+L    L +       +++   Y+  F   G P LV + L Y 
Sbjct: 18  PLTLQLAISSVFLGFFLALGL-ALMQLSSFAVLRSIARTYVLFF--RGTPLLVQLFLIYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF ++  S + P          ++LS  T A+ +EI+R GL +VP GQ+E+
Sbjct: 75  ------GLGQFPWVRESILWPFLREPQWCALLSLSLCTGAYASEIIRGGLQSVPVGQIES 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A G+      + ++ P A+R  +P   ++ ++++K++SLA  +   ++  +   +I +
Sbjct: 129 ARACGMPSFMIFKRIVFPLAIRQALPAYGNELISMVKSTSLASIITLMEITGIAARLIAE 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           T +A+E+ L+   IYL +++++   +    
Sbjct: 189 TYRALEVFLVAGAIYLFINLILTRLLMWTE 218



 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 3/101 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  LA S +     +   +   +LS+  ++  I R YV  FR  P LV +F +
Sbjct: 13  IIPGIPLTLQLAISSVFLGFFLALGLALMQLSSFAVLRSIARTYVLFFRGTPLLVQLFLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  +      P     + +      +  +  +L++ T A  
Sbjct: 73  YYGLGQ---FPWVRESILWPFLREPQWCALLSLSLCTGAYA 110


>gi|304438666|ref|ZP_07398604.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368315|gb|EFM22002.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 214

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 15/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      +           +IF  +  L + L LF   L R    +    +  L I  ++
Sbjct: 1   MDKTLDTIRLMLEGSGITLEIFCVTLALSLPLGLFV-ALGRLSRFRPLSRI--LEIYIWI 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P ++ +   Y           F       + P+  +  +A     AA+ AEI R+G
Sbjct: 58  MRGTPLMLQLLFVY-----------FALPMVGILLPDIAAALLAFVLNYAAYFAEIFRAG 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVPRGQ EAA  LG++     R ++LPQ +R  +PP++++ +NL+K++SL   +   D
Sbjct: 107 IQAVPRGQFEAARVLGMSGPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMND 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L+ V  TI+ +    +  +LI    YL+++ ++     +L A     
Sbjct: 167 LLRVARTIVQREFD-MTPLLIAGIFYLAMTAVLTYGFKKLEAHYGRY 212



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 37/101 (36%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  +    +  +  +G  V  GRLS  + ++ I  +Y+ + R  P ++ + 
Sbjct: 9   RLMLEGSGITLEIFCVTLALSLPLGLFVALGRLSRFRPLSRILEIYIWIMRGTPLMLQLL 68

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F+Y ++  V  +            LN              A
Sbjct: 69  FVYFALPMVGILLPDIAAALLAFVLNYAAYFAEIFRAGIQA 109


>gi|170724086|ref|YP_001751774.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169762089|gb|ACA75405.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 231

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 3/188 (1%)

Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++  F   L+ G+P L+ + L Y                       F +  
Sbjct: 41  KTSPLKPLQWLGGFYSTLVRGVPELLWVLLIYFGTVGLMNSLGEALNMPGLELSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKARILSRIILPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T +     ++   IYL L+++    M+ +  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIGVTVTKEPFTFYMVAACIYLGLTVVAMTGMHFMEK 220

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 221 RAARGFAR 228


>gi|222153166|ref|YP_002562343.1| transport system membrane protein [Streptococcus uberis 0140J]
 gi|222113979|emb|CAR42274.1| transport system membrane protein [Streptococcus uberis 0140J]
          Length = 219

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 14/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F    +     I   SF+ G+ L +    + R    +  + +  +Y+S  ++ G+P +
Sbjct: 13  LWFVLSGLPYTIGISALSFMTGVTLGILLAIMGR-SQHRILQKMVKVYVS--IMRGVPMI 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++   + L+F  P              P  +  YI  S  ++A+I+EI RS + AV  G
Sbjct: 70  VVL---FMLYFGMPYFNL--------QLPALLCAYIGFSLVSSAYISEIFRSSINAVDHG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG++ ++  + V+LPQA R  IPPL +  ++++K+SSLA  +   D+      
Sbjct: 119 QWEAAQALGISKKRVIQKVILPQAFRIAIPPLGNVVVDMIKSSSLAAMITVPDIFQNAKI 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +    + + ++  FIY  L  +   F + L  ++ +
Sbjct: 179 VGGREWDYMSMYILVAFIYWVLCYLFERFQSYLEDRLRI 217



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 35/78 (44%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            + +         +L G   T  ++    +    +G L+     S ++++  + +VYV +
Sbjct: 3   FIDFNLMKDSLWFVLSGLPYTIGISALSFMTGVTLGILLAIMGRSQHRILQKMVKVYVSI 62

Query: 136 FRNIPPLVVIFFLYKSVL 153
            R +P +VV+F LY  + 
Sbjct: 63  MRGVPMIVVLFMLYFGMP 80


>gi|168764867|ref|ZP_02789874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4501]
 gi|217327153|ref|ZP_03443236.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. TW14588]
 gi|189365197|gb|EDU83613.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. EC4501]
 gi|217319520|gb|EEC27945.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli O157:H7 str. TW14588]
 gi|326347536|gb|EGD71261.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. 1044]
          Length = 367

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y    ++  +                     T
Sbjct: 125 -----------YIAVWVVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|330427593|gb|AEC18927.1| polar amino acid ABC transporter, inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 217

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 18/232 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG       L     T+  +   FV   ++G++++L     SR    K  +AL + +I  
Sbjct: 4   FGYSDFWFILEAAQWTIALSLMAFVGGGIVGLIIAL-----SRTSESKLAQALSMGFIQL 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F                L     ++     + G  ++P F +   AL+  + AF+ EI R
Sbjct: 59  FR------------GTPLLLQLFLVFFGAPVIGLDINPWFAAAV-ALTLNSGAFLGEIWR 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ EAA ALGL +R   R V+LPQA++  +PP     + ++K +SLA  +GF
Sbjct: 106 GCIQAIPSGQWEAAEALGLNYRHKMRDVVLPQALKIAVPPTVGYLVQIVKGTSLAAIIGF 165

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L   G  I N T Q + +  +   IY  L   +++  + +  ++AL   +
Sbjct: 166 TELTRAGQIINNATFQPMMVFTVVAIIYFFLCWPLSMLASYMERRLALSLAR 217



 Score = 36.8 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 37/103 (35%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL     T  L+    +   I+G ++   R S +KL   +   ++++FR  P L+ +
Sbjct: 9   FWFILEAAQWTIALSLMAFVGGGIVGLIIALSRTSESKLAQALSMGFIQLFRGTPLLLQL 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           F ++     +    +        + LN+             A 
Sbjct: 69  FLVFFGAPVIGLDINPWFAAAVALTLNSGAFLGEIWRGCIQAI 111


>gi|330814717|ref|YP_004362892.1| hypothetical protein bgla_4p3090 [Burkholderia gladioli BSR3]
 gi|327374709|gb|AEA66060.1| hypothetical protein bgla_4p3090 [Burkholderia gladioli BSR3]
          Length = 505

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 7/225 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +    +    GL            +   S +   +  +    L+     +          
Sbjct: 1   MTDIDWHYVLGLFANFDFWRAAGIVVTLSILTWCISLVLGLVLALGKQARLAPVRLAAGT 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +    LP LVL+   Y L    P    F       +S  F +  +AL    +A+IAEI
Sbjct: 61  YVWFFRSLPLLVLLIFVYNLPQLLPATSGF-------LSDPFYAGLVALVANESAYIAEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL+ VP GQ EA  ALG+      RL++LPQA R  +P L ++++ ++K +SL   +
Sbjct: 114 HRGGLLGVPNGQHEAGRALGIGFLGRLRLIVLPQAFRIALPSLANEFITIVKLTSLVSVI 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             ++L+ VG  +  Q  + ++ +L+    Y+++  +       L 
Sbjct: 174 SLSELLLVGQRLYTQNFKVLDTLLVVAAFYVAIVTVFNGLSAMLE 218


>gi|78356475|ref|YP_387924.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218880|gb|ABB38229.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 233

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 67/236 (28%), Positives = 109/236 (46%), Gaps = 5/236 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    + + L      +    +    KI   S  L +VL      + R    +       
Sbjct: 2   NYTFDWQVVLTGEYREWIIDGVLLTLKISAVSLFLALVLGTVI-AVMRLSRIRPFVWFSA 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +   F     P LV I   Y             ++       EF +  IAL+ YTAAFI
Sbjct: 61  GFTEFF--RNTPLLVQIFFWYFGSDGLLPRPVLEWLYARDF--EFAAGVIALTVYTAAFI 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +RSG+ A+P+ Q+E++ A GL+  ++ R V+LPQA R I+PPL SQ LNL+KNSSL 
Sbjct: 117 AEEIRSGINAIPKTQLESSRACGLSFLQSMRYVILPQAFRIIVPPLISQALNLIKNSSLC 176

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +G A+L  +   + + T +  E   +   +YL +S+ ++  + + N       +
Sbjct: 177 MTIGVAELTYMTRQVESYTFRGFEAFTVATLVYLCISLAVSFTVTQYNRYFLRTVR 232



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 38/84 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   I+ G + T  ++   +  A ++GT++   RLS  +   W    + E FRN P 
Sbjct: 12  TGEYREWIIDGVLLTLKISAVSLFLALVLGTVIAVMRLSRIRPFVWFSAGFTEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVL 165
           LV IFF Y     +LP P    + 
Sbjct: 72  LVQIFFWYFGSDGLLPRPVLEWLY 95


>gi|304407617|ref|ZP_07389269.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304343568|gb|EFM09410.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 261

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 7/235 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F +      L     ++     I   S  +G ++ L    L + +     + L  
Sbjct: 1   MGQHQFEIVYVFEYLYRLLPSLKVTLLIVASSIGIGALVGLLV-ALPQLYRVPMLRRLSQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+S F   G P L+ + L Y    +     Q +     T +P    + +  S ++ A+I
Sbjct: 60  LYVSFF--RGTPILIQLFLFYYGVPEVLKAVQLD----VTRTPALFFVILTYSLHSGAYI 113

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E++R  ++AV RGQ EAA A+G+   +A   ++LPQA+   IP   +  +  LK++SLA
Sbjct: 114 SEVIRGAVMAVDRGQAEAAYAVGMNGFQAFSRIVLPQAISLSIPVFGNVVIANLKDTSLA 173

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G  D+     TI   + + IE  L    +Y  +S  +    +RL  ++   E
Sbjct: 174 FTLGILDISGKAKTIGTLSQRFIETYLSLAVLYFIISFALQKLFDRLEKRMLRHE 228



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L     T  +  S +    ++G LV   +L    ++  + ++YV  FR  P L+ 
Sbjct: 14  YLYRLLPSLKVTLLIVASSIGIGALVGLLVALPQLYRVPMLRRLSQLYVSFFRGTPILIQ 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           +F  Y  V  VL      +     +F 
Sbjct: 74  LFLFYYGVPEVLKAVQLDVTRTPALFF 100


>gi|295706522|ref|YP_003599597.1| arginine ABC transporter permease ArtQ [Bacillus megaterium DSM
           319]
 gi|294804181|gb|ADF41247.1| arginine ABC transporter, permease protein ArtQ [Bacillus
           megaterium DSM 319]
          Length = 223

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + +    +    +I + S +LG VL +    L +    K  +     Y 
Sbjct: 5   MNLDFSQIVPSMPYILKGIGVTIQIVLASAILGFVLGVIL-SLCKISRNKPLQWFADAYT 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + L Y   F  P L  F+                A    +AA+I+EI
Sbjct: 64  SVF--RGTPLVLQLLLIY---FGLPQLLGFDIAPFPAA-------VAAFGLNSAAYISEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G++AV +GQ EAA+ALG+ +R+    ++LPQA+++I+P L ++++ L K S++   +
Sbjct: 112 IRAGILAVDKGQREAALALGIPYRRMMGQIILPQALKNILPALMNEFITLTKESAIVTVI 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++     +  +    +E ++    IY  + + + L    +  ++   +
Sbjct: 172 GALDIMRRAYIVGGEKFAYLEPLIFAGLIYYVMVMGLTLLGKAVERRMRKGD 223



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++        IL G   T  +  +  I   ++G ++   ++S NK + W    Y  VF
Sbjct: 7   LDFSQIVPSMPYILKGIGVTIQIVLASAILGFVLGVILSLCKISRNKPLQWFADAYTSVF 66

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  +  +
Sbjct: 67  RGTPLVLQLLLIYFGLPQL 85


>gi|187732545|ref|YP_001881961.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine family
           [Shigella boydii CDC 3083-94]
 gi|187429537|gb|ACD08811.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Shigella boydii CDC 3083-94]
          Length = 367

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + + + + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRVLVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNAGR 364


>gi|237737432|ref|ZP_04567913.1| amino acid ABC transporter, permease [Fusobacterium mortiferum ATCC
           9817]
 gi|229421294|gb|EEO36341.1| amino acid ABC transporter, permease [Fusobacterium mortiferum ATCC
           9817]
          Length = 208

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 112/219 (51%), Gaps = 19/219 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+       VFS  LG++LSL   R+S++     G     + I T++  G P
Sbjct: 7   FILQGLGLTVKLYIVTMVFSLPLGVILSL--GRISKNSLLNNG-----IQIYTWIFRGTP 59

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ +   Y   +  PV+       G T+SP F +  +       A+  EI R  ++ + 
Sbjct: 60  LLLQLFFVY---YGLPVI-------GITLSP-FTAAALTFVINYTAYFCEIFRGSILGID 108

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA  LG+ + +  + +++PQA+ + +PPL ++ + L+K++SL  A+G A+++   
Sbjct: 109 KGQYEAAKVLGMNYWQTMKRIIIPQALITALPPLGNEAIALIKDTSLISALGMAEILRNS 168

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I+ +   +I   +I   IYL LS ++ +F  R+  K+
Sbjct: 169 REIVTRDF-SITPFIICAAIYLILSTVVVIFFKRMEKKV 206



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L    M+ +  +G ++  GR+S N L+    ++Y  +FR  P L+ +FF+
Sbjct: 8   ILQGLGLTVKLYIVTMVFSLPLGVILSLGRISKNSLLNNGIQIYTWIFRGTPLLLQLFFV 67

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           Y  +  +               +N     
Sbjct: 68  YYGLPVIGITLSPFTAAALTFVINYTAYF 96


>gi|254505865|ref|ZP_05118010.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219551088|gb|EED28068.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 264

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD+      G +     +    +T+  +    +F+ V+G+  +L      
Sbjct: 33  MGYQWQWDRVPDYIAFYEEGEWWPAELIEGLFVTIKISLISLLFTLVIGLTTALL----- 87

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +  +   G+AL   YI   LI   P LV I L Y +             G       F +
Sbjct: 88  KLSNSVVGRALATGYIE--LIRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 133

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ AEI R GL ++ +GQ EAA +LGL        V+LPQ ++  +PPLT
Sbjct: 134 AVLALSLFQGAYTAEIFRGGLNSISKGQFEAAKSLGLNPFYTYYDVILPQLLQRTLPPLT 193

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+ +T    EI      IYL L++ ++     L
Sbjct: 194 NEVVSLVKNSSIVSVMAIFDLTTEGRNIVAETAMPFEIWFSVAAIYLLLTLSLSALSALL 253

Query: 389 NAKIALKEK 397
             K+    +
Sbjct: 254 EHKLGASWR 262



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 77  VPYTSDSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           + +  +  +  A ++ G   T  ++   ++   +IG      +LS + +   +   Y+E+
Sbjct: 46  IAFYEEGEWWPAELIEGLFVTIKISLISLLFTLVIGLTTALLKLSNSVVGRALATGYIEL 105

Query: 136 FRNIPPLVVIFFLYKSV 152
            RN P LV I+ LY   
Sbjct: 106 IRNTPLLVQIYLLYFVF 122


>gi|34495574|ref|NP_899789.1| glutamate/aspartate transport system permease [Chromobacterium
           violaceum ATCC 12472]
 gi|34101429|gb|AAQ57798.1| glutamate/aspartate transport system permease [Chromobacterium
           violaceum ATCC 12472]
          Length = 246

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 9/216 (4%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+      ++ + +LG V+ +     +R    +    L  +Y+  F    +P LV + +
Sbjct: 31  WTLAVALSGWIIALLLGTVVGV-----ARTLPNRGIAGLATVYVELF--RNVPLLVQLFV 83

Query: 241 KYQLHFDK-PVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            Y L  D  P   Q  F    S  + +F+S+ + L  +TAA +AE VR+G+ A+PRGQ  
Sbjct: 84  WYFLVPDLLPEGAQIWFKQDLSPTTSQFLSVVVCLGLFTAARVAEQVRTGIEALPRGQRN 143

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA+A+G +  +  R VLLPQAMR IIPPLTS++LN++KNSS+A  +G A+L++       
Sbjct: 144 AAMAVGFSLGQTYRHVLLPQAMRIIIPPLTSEFLNIIKNSSVASLIGLAELLAQTKQTAE 203

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +    E   +   IY +L++ + L M+ L  K+ +
Sbjct: 204 FSANLFEAFTLATVIYFTLNMSLMLGMSALEKKLRV 239



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y +    G   T  +A SG I A ++GT+VG  R   N+ +A +  VYVE+FRN+P LV 
Sbjct: 21  YLSWFASGLGWTLAVALSGWIIALLLGTVVGVARTLPNRGIAGLATVYVELFRNVPLLVQ 80

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +F  Y  V  +LP          
Sbjct: 81  LFVWYFLVPDLLPEGAQIWFKQD 103


>gi|321313515|ref|YP_004205802.1| putative ABC transporter permease [Bacillus subtilis BSn5]
 gi|320019789|gb|ADV94775.1| putative ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 224

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L                L  LYIS F   G+PTLV + L Y   +  P L     
Sbjct: 38  GLILALITKN-----KIPVLHQLSKLYISFF--RGVPTLVQLFLIY---YGLPQL----- 82

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
               +      +  I LS   AA++AEI R+ L +V  GQ+EA +++G+T  +A R ++L
Sbjct: 83  FPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+ IP   + ++ LLK +SLA  +G  ++ + G    +   +  E  L    +Y  
Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWV 202

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           L+I+ ++  +     ++   +
Sbjct: 203 LTIIYSMLQDLFERAMSKPYR 223


>gi|293396872|ref|ZP_06641146.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291420343|gb|EFE93598.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 238

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPT 234
               + V +  LG++L++                        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLILAMLFAVWESARWNVVSWLGTAWVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+LI    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLLILSDGFTLNLGLFELPIQIDIENFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 QGQWESGQALGLSKAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    + R+  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLLVTLLSQYVIKRIELRTTRFER 235


>gi|117625559|ref|YP_858882.1| putative transport system permease protein [Escherichia coli APEC
           O1]
 gi|115514683|gb|ABJ02758.1| putative transport system permease protein [Escherichia coli APEC
           O1]
          Length = 368

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L    R  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRSR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|227112257|ref|ZP_03825913.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 225

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 17/240 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +          +   L     T+   A   +   V G+VL+       R         
Sbjct: 1   MSYQWDFSAIWPYHQLLLEGLWGTIKIGATSILIGMVAGMVLAAMKMSPQRLLRLPAAML 60

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +             P LV     + +++  PV+    F         F +  IALS  ++
Sbjct: 61  I-------GFYRNTPALVHF---FWIYYALPVITPLTF-------SPFTAAVIALSAQSS 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF AE+ R  + ++  GQ E A ALG++   A R V+LPQA+R +IPP   +   L+K++
Sbjct: 104 AFYAEVYRGAISSIHTGQWEGAKALGMSKSTALRRVILPQALRRMIPPFIERSFELIKST 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SLA ++ +++L+     I +QT + +E+  +   +Y +L ++I+LF   +  +++L +++
Sbjct: 164 SLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIEKRLSLTDRR 223



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 40/87 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   Y   +L G   T  +  + ++   + G ++ A ++S  +L+     + +  +R
Sbjct: 6   DFSAIWPYHQLLLEGLWGTIKIGATSILIGMVAGMVLAAMKMSPQRLLRLPAAMLIGFYR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           N P LV  F++Y ++  + P+      
Sbjct: 66  NTPALVHFFWIYYALPVITPLTFSPFT 92


>gi|91212701|ref|YP_542687.1| putative transport system permease [Escherichia coli UTI89]
 gi|237705971|ref|ZP_04536452.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA]
 gi|91074275|gb|ABE09156.1| putative transport system permease protein [Escherichia coli UTI89]
 gi|226899011|gb|EEH85270.1| amino acid ABC transporter permease [Escherichia sp. 3_2_53FAA]
          Length = 368

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L    R  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRSR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|77460757|ref|YP_350264.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77384760|gb|ABA76273.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 248

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG +L +      R    +    +   Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAIVAWIIALLLGSLLGIM-----RTVPNRIVSGIATCYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D   P L ++     +  +  ++S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPPDLQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAV 239



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A ++G+L+G  R   N++V+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAIVAWIIALLLGSLLGIMRTVPNRIVSGIATCYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPPDLQEWYKQD 103


>gi|295095777|emb|CBK84867.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 308

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SV   P     +    F +   L     T+       V S V+G +L+L     S     
Sbjct: 34  SVAFNPRWEWAVFARWFFDPVILEGVGQTLLLTLISTVLSVVIGGILALARLSSSWLLSS 93

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--------E 265
                +       +L   LP +V++ + Y   +    L       G T           +
Sbjct: 94  LAWGYI-------WLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTGITWGSFETINVLGQ 146

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+P
Sbjct: 147 FSTAIVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTVRIILPQALRTILP 206

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++ ++L K +++   +   +L      I N+T + I ++++    YL ++ +++   
Sbjct: 207 SGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWYLVITTVLSAIQ 266

Query: 386 NRLNAKIALKEKK 398
           + +   +A  E++
Sbjct: 267 HVIERGLARSERR 279


>gi|291616827|ref|YP_003519569.1| OccM [Pantoea ananatis LMG 20103]
 gi|291151857|gb|ADD76441.1| OccM [Pantoea ananatis LMG 20103]
          Length = 243

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 13/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F+ SF+ G VL++    L R    +   +    YI  F   G P ++ + L Y 
Sbjct: 19  PVTLGLFISSFLCGGVLAVGILAL-RMSRWRILSSFARGYILVF--RGSPLMIQLFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S V P     F    +ALS  TAA+ AEI+R  L+AVP GQ+EA
Sbjct: 76  ------GLGQFGVIRHSFVWPFLREPFSCAVLALSLCTAAYTAEILRGALLAVPAGQVEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P  +R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GMACGMSRWLLLRRIIAPVMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T + +E+ L    IYL L+ +I      L  ++
Sbjct: 190 TYRTMEVFLCAAAIYLILNFIIVQLYALLERRL 222


>gi|221069034|ref|ZP_03545139.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|264676835|ref|YP_003276741.1| glutamine-binding periplasmic protein [Comamonas testosteroni
           CNB-2]
 gi|299529655|ref|ZP_07043092.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44]
 gi|220714057|gb|EED69425.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|262207347|gb|ACY31445.1| glutamine-binding periplasmic protein [Comamonas testosteroni
           CNB-2]
 gi|298722518|gb|EFI63438.1| glutamine-binding periplasmic protein [Comamonas testosteroni S44]
          Length = 217

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 16/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   S  +G+ L+L      +      G  +       +L+ G P ++ +   Y  
Sbjct: 21  LFFITLALSIPMGLALALMRISSIKPLSSAVGAYI-------WLMRGTPLMLQLLFVY-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P +            P+F +  +A +   AA+ AEI R+G+ +V RGQ E A  LG
Sbjct: 72  -FALPFVPYIG-----VRLPDFPAAVVAFALNYAAYFAEIFRAGIKSVDRGQYEGAKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  R ++LPQ    I+PP++++ + L+K++SL   +   DL+ V   ++ +   + 
Sbjct: 126 MTYAQTMRRIVLPQMWARILPPVSNETITLVKDTSLIYVLALNDLLRVARGVVQRDF-SF 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              ++    YL +++++      L  K A  +
Sbjct: 185 TPFIVAAAFYLIMTLVLTWGFQYLEKKYAKYD 216



 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 31/66 (46%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G + T  L F  +  +  +G  +   R+S+ K ++     Y+ + R  P ++ + F+Y 
Sbjct: 13  AGALVTLKLFFITLALSIPMGLALALMRISSIKPLSSAVGAYIWLMRGTPLMLQLLFVYF 72

Query: 151 SVLSVL 156
           ++  V 
Sbjct: 73  ALPFVP 78


>gi|108799999|ref|YP_640196.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119869124|ref|YP_939076.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108770418|gb|ABG09140.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. MCS]
 gi|119695213|gb|ABL92286.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 307

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 8/186 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALK-------YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + ++  ++  G P  V +            +    P    F  +    +S  F    I L
Sbjct: 102 VAWVYLWIFRGTPVYVQLVFWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGL 161

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
               AA++AEI+R+G+ +VP GQ EA+ ALG++     R  +LPQAMR IIPP  ++ ++
Sbjct: 162 GLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIIS 221

Query: 334 LLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +LK +SL  AV +  +L      I     Q I ++++    YL+++ ++ +    L    
Sbjct: 222 MLKTTSLVTAVPYSMELYGRARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQYYLERYF 281

Query: 393 ALKEKK 398
           +    +
Sbjct: 282 SRGASR 287



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 42/108 (38%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
            NT  L    M+ A ++G L+   RLS N +   +  VY+ +FR  P  V + F      
Sbjct: 68  WNTLQLTILSMVLALVLGVLLAVMRLSPNPVFKSVAWVYLWIFRGTPVYVQLVFWGLFPT 127

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
               I       P    +N +GLS           +   +++  I+ +
Sbjct: 128 LYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGLGLNEAAYMAEIIRA 175


>gi|292670308|ref|ZP_06603734.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas noxia ATCC 43541]
 gi|292648039|gb|EFF66011.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Selenomonas noxia ATCC 43541]
          Length = 214

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +IF  +  L + L LFA  L R    +      LL +  +++ G P ++ +   Y  
Sbjct: 17  VTLEIFCVTLALSLPLGLFA-ALGRLSRFRILSR--LLEVYIWIMRGTPLMLQLLFVY-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F       + P+  +  +A     AA+ AEI RSG+ AVPRGQ EAA  LG
Sbjct: 72  ---------FALPMIGIMLPDIAAALLAFVLNYAAYFAEIFRSGIQAVPRGQFEAARVLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R ++LPQ +R  +PP++++ +NL+K++SL   +   DL+ V  TI+ +    +
Sbjct: 123 MSAPLTMRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFD-M 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              LI    YL+++ ++     +L       E
Sbjct: 182 TPFLIAGIFYLAMTAVLTYGFKKLEVHYGRYE 213



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 3/123 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +  +  +G     GRLS  ++++ +  VY+ + R  P ++ + F+
Sbjct: 11  MLEGSTVTLEIFCVTLALSLPLGLFAALGRLSRFRILSRLLEVYIWIMRGTPLMLQLLFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVLSLFAT 205
           Y ++  +  +            LN              A     F  + VLG+   L   
Sbjct: 71  YFALPMIGIMLPDIAAALLAFVLNYAAYFAEIFRSGIQAVPRGQFEAARVLGMSAPLTMR 130

Query: 206 RLS 208
           R+ 
Sbjct: 131 RII 133


>gi|226310677|ref|YP_002770571.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093625|dbj|BAH42067.1| amino acid ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 219

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 109/224 (48%), Gaps = 8/224 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI-STFLI 229
           +N   +   T  M   A++ V  F++ I+LS+    L     + + KAL  L     +++
Sbjct: 1   MNVDYILSITKPMLEGAQMTVLLFLIAILLSIPLGFLITLLAKSSNKALAWLAHTYVYVM 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +     + F  P+L     +G   V   F++  +      AA+ AEI R GL
Sbjct: 61  RGTPLLLQLLF---ICFGLPLL---PVVGDYLVMDRFVAACVGFVLNYAAYFAEIFRGGL 114

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++ +GQ EAA  LG +  + T  +++PQ  R  +P + ++ + L+K+++L  AV   +L
Sbjct: 115 LSIDKGQYEAAQVLGFSKWQTTNKIIMPQMFRVALPAVANESITLVKDTALLYAVAVPEL 174

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    T +N+    I    I   IYL +++++ LF   L  +  
Sbjct: 175 LHFAQTAVNRDF-TIVPFFIAGIIYLLMTLLLTLFFKWLEKRFK 217



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 39/84 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    +L G   T  L    ++ +  +G L+     S+NK +AW+   YV V R  P L+
Sbjct: 8   SITKPMLEGAQMTVLLFLIAILLSIPLGFLITLLAKSSNKALAWLAHTYVYVMRGTPLLL 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPF 167
            + F+   +  +  + D+ ++  F
Sbjct: 68  QLLFICFGLPLLPVVGDYLVMDRF 91


>gi|324115126|gb|EGC09090.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 367

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IVPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLENRFNTGR 364


>gi|300311471|ref|YP_003775563.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300074256|gb|ADJ63655.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 221

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 99/212 (46%), Gaps = 13/212 (6%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
              +F  + +LG ++  F   ++R    +       +Y+S  ++ G P LV I + Y   
Sbjct: 22  YTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVS--MMRGTPLLVQIFVVYY-- 77

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                       G         +  + LS   +A+++E +R  ++ V RGQ  AA ++GL
Sbjct: 78  ---------GLPGMGIEFSPLTAGVLTLSLNASAYLSESLRGAILGVTRGQWNAAFSVGL 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +  R +++PQA+R  +P +++  ++L+K++SL   +   +L+     +I  T + + 
Sbjct: 129 TYFQTLRYIIVPQAVRIAVPSMSNTLISLIKDTSLVSVITVTELMLATKEVIAVTFRPLP 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +    IY  LS+      +RL  K+    +
Sbjct: 189 LYVAAAAIYWMLSLCFEALQHRLEKKLGKAHQ 220



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T   A + M+   ++G ++   R+   + + W   +YV + R  P LV IF +
Sbjct: 16  LAKGVGYTLLFALASMLGGLVLGFVLAVARIVPWRPIHWPAAIYVSMMRGTPLLVQIFVV 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +             + LN
Sbjct: 76  YYGLPGMGIEFSPLTAGVLTLSLN 99


>gi|126175590|ref|YP_001051739.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           baltica OS155]
 gi|125998795|gb|ABN62870.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS155]
          Length = 226

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG VL +  T   +   +   +    LY+   +I G P +V + + Y +
Sbjct: 30  VTLIVTFFAMLLGAVLGIGTT-FMKMSSKWYIRFPANLYVG--VIRGTPVVVQLVILYFI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +  +    +  +  IA    + A+I+EI+R+G+ AV +GQ EAA +LG
Sbjct: 87  ------------VLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     + ++LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +  
Sbjct: 135 LSKAMTMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDS 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +     IYL L+      +++   ++   +
Sbjct: 195 VPLFTCALIYLFLTYSFTFVLSKFEKRLKQSD 226



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  M+   ++G      ++S+   + +   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMLLGAVLGIGTTFMKMSSKWYIRFPANLYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VLS 
Sbjct: 84  YFIVLSA 90


>gi|94309346|ref|YP_582556.1| amino acid ABC transporter permease [Cupriavidus metallidurans
           CH34]
 gi|93353198|gb|ABF07287.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 227

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 6/229 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                +N   L      M  +AKI V + ++GIV       + R    K        Y++
Sbjct: 5   FDFSSINPSTLHVLGEGMLVSAKITVTAVIVGIVWGTIL-AMMRLSSNKLLNWFAQGYVT 63

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F       LV++ L + L   + +   FN    S +     S  IA S + AA+ +EI+
Sbjct: 64  LFRSIP---LVMVLLWFFLIIPQLLQKTFNLSAASDLR--MTSALIAFSLFEAAYYSEII 118

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V RGQM AA A+G+T+ ++ RLV+LPQA R+++P L +Q + L +++SL     
Sbjct: 119 RAGIQSVSRGQMFAAQAMGMTYGQSMRLVILPQAFRNMVPLLLTQGIILFQDTSLVYVSA 178

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            AD       I  + G+ +E++L    IY  +    +L + R   K+A+
Sbjct: 179 LADFFGQAYGIGERDGRIVEMLLFAGLIYFIICFSASLLVKRYQKKVAV 227



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 39/68 (57%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + +  +  + +I   + GT++   RLS+NKL+ W  + YV +FR+IP ++V+ +
Sbjct: 17  VLGEGMLVSAKITVTAVIVGIVWGTILAMMRLSSNKLLNWFAQGYVTLFRSIPLVMVLLW 76

Query: 148 LYKSVLSV 155
            +  +  +
Sbjct: 77  FFLIIPQL 84


>gi|307132981|ref|YP_003884997.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306530510|gb|ADN00441.1| Amino acid ABC transporter, permease protein [Dickeya dadantii
           3937]
          Length = 223

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 116/234 (49%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L + + +  + L +   T+       +F+ VLG+VL+L      R         L  LYI
Sbjct: 5   LSYLLKVFPQVLMYLPTTLLLAVVSMLFAIVLGLVLALV-----RESRFVVVAKLVELYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+P+LV + + Y   F  P L                +  I  S   +A++AEI
Sbjct: 60  SLF--RGIPSLVQLFIIY---FGLPQL-----FPSLNGLSAMTAAIIGFSLKNSAYMAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L +V  GQ EA +++G+   +  R ++LPQAM + +P   + +++L+K++S+A A+
Sbjct: 110 FRAALASVDFGQTEAGLSVGMNKAQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ++L + G  I  ++ +  E  L+   IY  L ++ +   ++L  K++   ++
Sbjct: 170 GVSELFAEGKMIAAESLRFFETFLVVGLIYWMLIVVYSWLQSQLEKKLSHSRQR 223



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  LA   M+ A ++G ++   R S   +VA +  +Y+ +FR IP LV +F +Y  +
Sbjct: 19  LPTTLLLAVVSMLFAIVLGLVLALVRESRFVVVAKLVELYISLFRGIPSLVQLFIIYFGL 78

Query: 153 LSVLP 157
             + P
Sbjct: 79  PQLFP 83


>gi|288959645|ref|YP_003449986.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288911953|dbj|BAI73442.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 229

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 13/225 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      +    ++ + S  LG +++ FA  L R    +  + L   Y+  F   G
Sbjct: 6   MWDSLPRMLGGLSLTLQLIIASLALGALVA-FAVALLRLSGNRLVEGLAGAYVFFF--RG 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRS 287
            P LV I L Y        LGQF+ I  S + P     +    +AL+  T A+ +E++R 
Sbjct: 63  TPLLVQIFLIYF------GLGQFDLIKNSILWPFLREPYWCAILALTLNTGAYTSEVLRG 116

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +++VP+GQ+EAA A G++   A R ++LP A+R ++P   ++ + ++K +SLA  +   
Sbjct: 117 AILSVPQGQVEAARACGMSRALAFRRIVLPVAIRQMLPAYGNEVILMVKATSLASTITLM 176

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++  +   +I QT    E+ ++   IYL L+ +    +     ++
Sbjct: 177 EVTGIARRMIAQTFAVFELFIVAGAIYLVLNFVATRLIKFAEWRL 221



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L  + +    ++   V   RLS N+LV  +   YV  FR  P LV IF +
Sbjct: 13  MLGGLSLTLQLIIASLALGALVAFAVALLRLSGNRLVEGLAGAYVFFFRGTPLLVQIFLI 72

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 73  YFGLGQFD 80


>gi|165977040|ref|YP_001652633.1| ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|165877141|gb|ABY70189.1| ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 217

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 13/211 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L           +   A+  +YIS  +I G P LV I++ + 
Sbjct: 16  PLAIASFIIGMAIAVGVALIRVTPVNGMLHRIALAIVKVYIS--IIRGTPMLVQISVVFY 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E VR+ + +VP+GQ EA   +
Sbjct: 74  -----------GLPAIGVYIDPIPAAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTI 122

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T+ +  R ++ PQA+R +IPPL++ ++ L K++SLA  V   ++  V   + N +   
Sbjct: 123 GMTYMQTFRWIIAPQAIRVVIPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQMANISYDF 182

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + + +    IY     ++ L   +L  +   
Sbjct: 183 LPVYIEAGLIYWCFCWVLFLIQAKLERRFNR 213


>gi|190894163|ref|YP_001984457.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190699824|gb|ACE93907.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 249

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 5/207 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S   G  +S+    L R        A  L Y   F   G P LV + L Y  
Sbjct: 19  LTLVLTFASLAAGFAVSVPLAFL-RASSNPWASAPVLAYTYAF--RGTPLLVQLFLIYYG 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P++ Q      + +   F   +IA +  +AA   E++R G+ AVPRGQ+EAA ALG
Sbjct: 76  IGQLPLVRQSFL--WAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQIEAAKALG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     RL++ P  +R  +P   ++ + +LK SSLA  +   ++  +   ++++T    
Sbjct: 134 LSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLVSETFAPY 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E+ +     YL L+++I      L  +
Sbjct: 194 EVFIAAGAFYLLLTLLITQGFQMLETR 220


>gi|171780124|ref|ZP_02921028.1| hypothetical protein STRINF_01912 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281472|gb|EDT46907.1| hypothetical protein STRINF_01912 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 234

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 11/203 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + + +L  VL +    +S     +  KA+  +Y+  F     P LV     Y    
Sbjct: 34  LGMSICALILAFVLGVIFGAMS-SSKNRVLKAIARVYVEVF--QNTPLLVQFVFVYYGLA 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G  +   F +  + +  Y  A+IAE++RSG+ AVP+GQ EAA++ G T
Sbjct: 91  IM--------TNGVIMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALSQGFT 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +   L++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++        +T   +  
Sbjct: 143 YSQTMSLIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYVPA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
                 +Y  +   +A +     
Sbjct: 203 FAGAALLYFIMCFPLATWARHKE 225



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 37/64 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +I A ++G + GA   S N+++  I RVYVEVF+N P LV   F+
Sbjct: 26  FAKGFLYTLGMSICALILAFVLGVIFGAMSSSKNRVLKAIARVYVEVFQNTPLLVQFVFV 85

Query: 149 YKSV 152
           Y  +
Sbjct: 86  YYGL 89


>gi|82545640|ref|YP_409587.1| transport system permease protein [Shigella boydii Sb227]
 gi|81247051|gb|ABB67759.1| putative transport system permease protein [Shigella boydii Sb227]
          Length = 368

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+         +L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLVLLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 126 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|226330764|ref|ZP_03806282.1| hypothetical protein PROPEN_04684 [Proteus penneri ATCC 35198]
 gi|225201559|gb|EEG83913.1| hypothetical protein PROPEN_04684 [Proteus penneri ATCC 35198]
          Length = 234

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 10/221 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + + + ++G+VL++  T        K    L   +++         LV++ + Y  
Sbjct: 13  TTVTLAISALIIGLVLAMLFTAW-ESARWKAFAFLGTCWVTLIRGL-PEMLVVLFVYYGT 70

Query: 245 HFDKPVLGQFNFIGGSTVSP--------EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                +L     +G  T+           F    IALS   A++ ++ +R  L AVP GQ
Sbjct: 71  LQGVMMLMDGIDLGAFTLQIDFGDTESLPFYCGVIALSLLYASYASQTLRGALKAVPTGQ 130

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA  ALG+         ++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 131 WEAGQALGMGRITIFFRFIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTQSI 190

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            N+T +      I   IYL+++++    +  L  +    E+
Sbjct: 191 ANRTQEPFTWYSIVALIYLAITLVSQYILKWLEMRTTRFER 231


>gi|255263812|ref|ZP_05343154.1| ABC-type amino acid transport system permease component
           [Thalassiobium sp. R2A62]
 gi|255106147|gb|EET48821.1| ABC-type amino acid transport system permease component
           [Thalassiobium sp. R2A62]
          Length = 248

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 29/261 (11%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+                      P G       ++    T+  +    + S V+G++++
Sbjct: 10  LIFAVLTLAGCSGNWGWYVVDPSTPKGWSNLQFMMTGAYNTILMSLTAILISVVVGLLVA 69

Query: 202 L------FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L         R+    + +  +A+P+L +  ++ +GLPTL  + L               
Sbjct: 70  LPGLSDKRGWRIFNRTYVEVVRAVPILVLILWVYYGLPTLTGLTLN-------------- 115

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                     F +  +AL+   +AF AEI R+G+ ++ +GQ EAA ++ L +R   R ++
Sbjct: 116 ---------VFWAGVLALALSDSAFQAEIFRAGIQSIGKGQYEAAQSISLNYRDTMRYII 166

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R I+P L +Q + +LK SSL   +G  +L      ++    + +EI  I +  YL
Sbjct: 167 LPQAIRRILPALGNQLVYMLKMSSLVSVIGMQELTRKANELVVSEYRPLEIYTILVLEYL 226

Query: 376 SLSIMIALFMNRLNAKIALKE 396
            L ++++  +  L +++   E
Sbjct: 227 VLILIVSAGVRWLESRMTASE 247



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 36/72 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S    ++ G  NT  ++ + ++ + ++G LV    LS  +      R YVEV R +P 
Sbjct: 36  GWSNLQFMMTGAYNTILMSLTAILISVVVGLLVALPGLSDKRGWRIFNRTYVEVVRAVPI 95

Query: 142 LVVIFFLYKSVL 153
           LV+I ++Y  + 
Sbjct: 96  LVLILWVYYGLP 107


>gi|228983609|ref|ZP_04143813.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228776094|gb|EEM24456.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 225

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 64/188 (34%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 36  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 81

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 82  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLG 141

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F+N L
Sbjct: 142 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYMIVGLYYLVLVLLFTYFVNLL 201

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 202 EKRLQRKE 209


>gi|28377653|ref|NP_784545.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254555834|ref|YP_003062251.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308179813|ref|YP_003923941.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270486|emb|CAD63388.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum WCFS1]
 gi|254044761|gb|ACT61554.1| glutamine ABC transporter, substrate binding and permease protein
           [Lactobacillus plantarum JDM1]
 gi|308045304|gb|ADN97847.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 478

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 11/219 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      +    ++ V S +L  +L L    L      K G A+    I  F   G+P
Sbjct: 270 QNLDTIGSGLWMTLELTVISIILATILGLILGVLG-VMPGKLGPAISSTIIYIF--RGMP 326

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +VL    Y    D         IG     P F++  I L     A+    V+ G  AV 
Sbjct: 327 LMVLAFFIYIGFPDL--------IGHGFKIPAFVAGMITLMLNEGAYTGAFVKGGFAAVD 378

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQMEAA +LGL +  A R V++PQ +R +IP   +Q++  LK++S+   +G  +L   G
Sbjct: 379 DGQMEAARSLGLPYWTAMRKVIMPQGIRIMIPSFINQFIITLKDTSILSVIGIVELTQTG 438

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             II +  +  +I L+   IYL +  ++    N +  +I
Sbjct: 439 TLIIARNFEGFKIWLMIAIIYLIIITLLTWLSNWVQRRI 477



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 35/86 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I  G   T  L    +I ATI+G ++G   +   KL   I    + +FR +P +V+ 
Sbjct: 272 LDTIGSGLWMTLELTVISIILATILGLILGVLGVMPGKLGPAISSTIIYIFRGMPLMVLA 331

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL 171
           FF+Y     ++           GM  
Sbjct: 332 FFIYIGFPDLIGHGFKIPAFVAGMIT 357


>gi|225027102|ref|ZP_03716294.1| hypothetical protein EUBHAL_01358 [Eubacterium hallii DSM 3353]
 gi|224955566|gb|EEG36775.1| hypothetical protein EUBHAL_01358 [Eubacterium hallii DSM 3353]
          Length = 222

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 103/208 (49%), Gaps = 7/208 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              KI + S ++ +V+ +F   L         + +   YI  +LI G P LV     +  
Sbjct: 20  MTVKITILSLIIALVIGIFVC-LMNISSNIVLRGIAKFYI--WLIRGTPMLVQ---AFYF 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P L Q    G       F +  + L+    A+I+EI R  + +V +GQMEAA +LG
Sbjct: 74  YFALPQLVQ-AVTGSQFRITVFTASLVTLALNAGAYISEIFRGSIESVNKGQMEAARSLG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L++ K+ + ++LPQA+R  +P L +Q++  LK+S++  A+G ++++      + +T ++ 
Sbjct: 133 LSYAKSMQKIILPQAVRICLPSLVNQFIITLKDSTILYAIGLSEVMYNAKIYVGRTMESF 192

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
                    +L +  +++     +  ++
Sbjct: 193 ATYTWVAVFFLLIVTVLSFISRYVERRM 220



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I A +IG  V    +S+N ++  I + Y+ + R  P LV  F+ 
Sbjct: 14  LLTGLTMTVKITILSLIIALVIGIFVCLMNISSNIVLRGIAKFYIWLIRGTPMLVQAFYF 73

Query: 149 YKSVLSV 155
           Y ++  +
Sbjct: 74  YFALPQL 80


>gi|123441812|ref|YP_001005796.1| arginine transporter permease subunit ArtQ [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088773|emb|CAL11579.1| arginine transport system permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 238

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++       +R     +  TG     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLVLAMLFAVCESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNIDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|120601966|ref|YP_966366.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120562195|gb|ABM27939.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 237

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 5/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                + + L+   L +    + T  ++   S VL ++L      + R    +      +
Sbjct: 6   QYTFDWNLVLSGERLDWIVQGVITTCQLSGLSLVLAMLLGTLI-AVMRLSGVRPFVWFSV 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +   F     P LV I   Y       VL           + EF +  I+L+ YTAAFI
Sbjct: 65  AFTEFF--RNTPLLVQIFFWYFGS--DAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFI 120

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +RSG+ ++PR Q+EA+ A GL+  +A   V+LPQA R I+PPL SQ LNL KNSSL 
Sbjct: 121 AEEIRSGIFSIPRTQLEASRACGLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLC 180

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +G  +L  +   I + T    E   +   IYL +S+M++L +N  N   
Sbjct: 181 MTIGVMELTYMARQIESYTFHGFEAFTVSTLIYLCISLMVSLLINLYNTHF 231



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 39/81 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ G + T  L+   ++ A ++GTL+   RLS  +   W    + E FRN P LV I
Sbjct: 20  LDWIVQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAFTEFFRNTPLLVQI 79

Query: 146 FFLYKSVLSVLPIPDHSIVLP 166
           FF Y    +VLP   +  +  
Sbjct: 80  FFWYFGSDAVLPDAVNQWLYK 100


>gi|238749809|ref|ZP_04611314.1| Arginine transport system permease protein artQ [Yersinia rohdei
           ATCC 43380]
 gi|238712464|gb|EEQ04677.1| Arginine transport system permease protein artQ [Yersinia rohdei
           ATCC 43380]
          Length = 238

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++       +RL    +  TG     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNIDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYMIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|328948377|ref|YP_004365714.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328448701|gb|AEB14417.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 222

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 103/236 (43%), Gaps = 15/236 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                +   ++ +        +     I + + +LG +L      L +       + +  
Sbjct: 1   MFDSIYDTLISGQRWLLLLQGLGVTIYIAIVAIILGTILG-AVFALFKISKNPVLRIVAE 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y  T +I G+P    + + Y + F    L +             +   +A    + A+ 
Sbjct: 60  IY--TTVIRGIPLATQLMIFYFVVFAPLGLDR------------VLVATLAYGINSGAYC 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI R+G+  V  GQMEA  +LGL + +   +++ PQA ++++P  TS+++ L+K +S+A
Sbjct: 106 TEIFRAGIQGVDSGQMEAGRSLGLNYWQTLTMIIFPQAAKAVLPTYTSEFIVLIKETSVA 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   DL   G  I N T  A   +L    IYL L++ +    + L  ++A  ++
Sbjct: 166 SFIAVMDLTKAGDMIRNATYNAWIPLLSCALIYLCLTLGLTKLFSILEKRMAKSDR 221



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T ++A   +I  TI+G +    ++S N ++  +  +Y  V R IP    +
Sbjct: 15  WLLLLQGLGVTIYIAIVAIILGTILGAVFALFKISKNPVLRIVAEIYTTVIRGIPLATQL 74

Query: 146 FFLYKSVL 153
              Y  V 
Sbjct: 75  MIFYFVVF 82


>gi|327438995|dbj|BAK15360.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 219

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 14/215 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     + + +F + +V+++ AT L+R  + +  + +   Y+  F   G P L
Sbjct: 13  WPILKAGLLVTIPLSLIAFAIAVVIAV-ATALARISNYRVLRWIFGAYVWMF--RGTPLL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +           F           + +  I  S  T A+ +E +R+ ++A+P+G
Sbjct: 70  VQLFIVF-----------FGLPKLGITLDAWTAAIITFSLNTGAYASESIRASILAIPKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LG+T+ +  R V+ PQ +R  +PP+ + +++++K +SL  ++  ADL  VG  
Sbjct: 119 QWEAAESLGMTYWQMMRRVIAPQTVRISLPPVANDFIDMVKGTSLVASITLADLFMVGQQ 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           I  +T + + I  +   IYL    ++ +   RL  
Sbjct: 179 ITARTYEPLMIYSLCAVIYLIFISVLMVIQGRLEK 213



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SS    +  G + T  L+      A +I       R+S  +++ WI   YV +FR  P L
Sbjct: 10  SSIWPILKAGLLVTIPLSLIAFAIAVVIAVATALARISNYRVLRWIFGAYVWMFRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  +  +    D          LN
Sbjct: 70  VQLFIVFFGLPKLGITLDAWTAAIITFSLN 99


>gi|1649036|gb|AAB49428.1| glutamine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhimurium]
          Length = 219

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAG-FARTFGGWFANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPMVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLEKRMKI 218



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 63/210 (30%), Gaps = 4/210 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G+    +IG   G  R         I  V++E+ R
Sbjct: 4   DWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++                + +     ++               F   
Sbjct: 64  GTPMVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREA 123

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L L      RH          L  +    I  +      +L   +   +        
Sbjct: 124 GLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKD---TSLFIVIGVAELTRQGQEI 180

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G+  + E  S            ++ I+R
Sbjct: 181 IAGNFRALEIWSAVAVFYLIITLVLSFILR 210


>gi|271498822|ref|YP_003331847.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270342377|gb|ACZ75142.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 221

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   + +   S  +  +     + + SF+LG+++ +    L R +     K +   Y
Sbjct: 1   MPSWLQLMADSFWSLLSAGLTFTVPLAILSFILGLMIGVLV-ALLRLYGATPLKKICDFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  S    A+ +E
Sbjct: 60  V--WMIRGTPLLVQLFLIFY-----------GLPSAGITLDAFPAALIGFSLNVGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  +++VP+GQ  AA +LG++  +A R V++PQ++   +PPL + +++L+K++SLA  
Sbjct: 107 IVRGAILSVPKGQWNAAYSLGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I++ T + + + +    IYL  S +++    RL      
Sbjct: 167 ITVPEMFLAAQRIVSVTYEPLILYIEAALIYLMFSTVLSKLQTRLEKYYQR 217



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+ + +  G   T  LA    I   +IG LV   RL     +  IC  YV + R  P 
Sbjct: 9   ADSFWSLLSAGLTFTVPLAILSFILGLMIGVLVALLRLYGATPLKKICDFYVWMIRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S     D       G  LN
Sbjct: 69  LVQLFLIFYGLPSAGITLDAFPAALIGFSLN 99


>gi|222081156|ref|YP_002540519.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725835|gb|ACM28924.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 219

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 104/235 (44%), Gaps = 17/235 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +     F +  +         T        V    +G V++L     +R  + K    
Sbjct: 1   MGYQWDFGFLLQYSKLIWIGALYTCGFTIITVVSGLTVGGVIAL-----ARLSNFKIVSV 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   +I  F     P LV +   Y              + G  ++P  ++ +I L+ Y A
Sbjct: 56  LLTGFIEIF--RCTPVLVQLVWCYY---------ALPILSGIELTPA-VAAFITLTLYGA 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           +F +EI+R G+++V  GQ +A  A+G+   +  R V++PQA+R ++PPL +Q +  LKN+
Sbjct: 104 SFYSEIIRGGIVSVDAGQWDAGRAIGMRRHQLMRRVIMPQALRRMLPPLVNQSVLQLKNT 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           SL   +   DL+  G  I + + + +E   +   IY  +   +    + L A++A
Sbjct: 164 SLLSVLAVPDLLYQGQLITSASYRPLETYTMIAVIYFIILFPLTRLAHGLEARMA 218



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 49/127 (38%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y+  I +G + T       ++    +G ++   RLS  K+V+ +   ++E+FR  P LV
Sbjct: 12  QYSKLIWIGALYTCGFTIITVVSGLTVGGVIALARLSNFKIVSVLLTGFIEIFRCTPVLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            + + Y ++  +  I     V  F          +  +       +    +  G  + + 
Sbjct: 72  QLVWCYYALPILSGIELTPAVAAFITLTLYGASFYSEIIRGGIVSVDAGQWDAGRAIGMR 131

Query: 204 ATRLSRH 210
             +L R 
Sbjct: 132 RHQLMRR 138


>gi|121609113|ref|YP_996920.1| beta tubulin [Verminephrobacter eiseniae EF01-2]
 gi|121553753|gb|ABM57902.1| Beta tubulin, autoregulation binding site [Verminephrobacter
           eiseniae EF01-2]
          Length = 222

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 12/209 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I ++S +L IV++  AT L R    +  +    +Y+  F   G   LV +   + +
Sbjct: 14  VTIEIALYSILLAIVMAGLATAL-RTAPLRVVRWTGNIYVEVF--RGTSLLVQLFWFFFV 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P   +            F    + L  +  A+ +E++R  L +VP GQ EAA+AL 
Sbjct: 71  LPLAPFNIEL---------TPFTVAIVGLGLHYGAYGSELLRGALHSVPNGQYEAALALN 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R ++LPQA+ + +PP T+  + LLK +SL   +  +DL      +   T +  
Sbjct: 122 MSAATRMRRIVLPQALLNALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDESTFRTA 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           EI  + + IY  L+  I+  M  +  ++ 
Sbjct: 182 EIFSLTLVIYFVLAQTISYAMRHVERRLG 210



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 35/72 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  +A   ++ A ++  L  A R +  ++V W   +YVEVFR    LV +F+ 
Sbjct: 8   LMKGTLVTIEIALYSILLAIVMAGLATALRTAPLRVVRWTGNIYVEVFRGTSLLVQLFWF 67

Query: 149 YKSVLSVLPIPD 160
           +  +       +
Sbjct: 68  FFVLPLAPFNIE 79


>gi|218548331|ref|YP_002382122.1| glutamine ABC transporter permease [Escherichia fergusonii ATCC
           35469]
 gi|218355872|emb|CAQ88487.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
 gi|324112751|gb|EGC06727.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia fergusonii B253]
          Length = 219

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   I  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHIALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|227877817|ref|ZP_03995841.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844626|ref|ZP_05550111.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256850695|ref|ZP_05556119.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|293381614|ref|ZP_06627598.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295692448|ref|YP_003601058.1| glutamine ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|227862578|gb|EEJ70073.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256613167|gb|EEU18371.1| glutamine ABC transporter permease [Lactobacillus crispatus
           125-2-CHN]
 gi|256712466|gb|EEU27463.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|290921798|gb|EFD98816.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|295030554|emb|CBL50033.1| Glutamine ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
          Length = 213

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 71/221 (32%), Positives = 116/221 (52%), Gaps = 18/221 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+ ++    VFS +LG++ +L     S     K G+ +  +YI+ F    
Sbjct: 9   WGSFLTGFWNTILSSIIALVFSLILGVIFALLEVAPS-----KFGQVIAKIYIAIF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ + Y +                     F +  I L+ YT+AFIAE VR+G+ +
Sbjct: 62  IPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 IGTGQMEGARSNGMTYVQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               I   T Q I+  +I    YL L++ ++ +M  L  K+
Sbjct: 171 QAQLIAFSTFQTIDTYIIVGLFYLILTLPLSYYMRHLEKKL 211



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + L GF NT   +   ++ + I+G +     ++ +K    I ++Y+ +FRNIP LV++
Sbjct: 9   WGSFLTGFWNTILSSIIALVFSLILGVIFALLEVAPSKFGQVIAKIYIAIFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
              Y  V   +           G+ L        T+    N+   
Sbjct: 69  MIFYLIVPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINSIGT 113


>gi|193071516|ref|ZP_03052426.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E110019]
 gi|192955153|gb|EDV85646.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Escherichia coli E110019]
          Length = 367

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 326 TWLGMSTEGYVFAALLYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|167766046|ref|ZP_02438099.1| hypothetical protein CLOSS21_00539 [Clostridium sp. SS2/1]
 gi|317498083|ref|ZP_07956386.1| binding-protein-dependent transport system inner membrane component
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167712126|gb|EDS22705.1| hypothetical protein CLOSS21_00539 [Clostridium sp. SS2/1]
 gi|291560004|emb|CBL38804.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SSC/2]
 gi|316894671|gb|EFV16850.1| binding-protein-dependent transport system inner membrane component
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 225

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 110/227 (48%), Gaps = 16/227 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+  +    +    LG +L+L   RL+     K+     + Y+   +I G
Sbjct: 15  YLLYLDGLKVTILVSVIAILIGVALGTILALM--RLTAEQKGKSTLLSKIAYVYIDIIRG 72

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            PTL  + + Y +                      +   +     +AA++AEI+R+G+ A
Sbjct: 73  TPTLTQLMIMYFVIL--------------KGQNGLLVGSLTFGLNSAAYVAEIIRAGIQA 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQME   +LGL++ +  + ++LPQA+++I+P L ++++ L+K +S+   V   DL  
Sbjct: 119 VDQGQMEGGRSLGLSYVQTMKDIILPQAIKNILPALGNEFIVLIKETSILGYVAIVDLTK 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V   +I++  +A+  +L    IY  +  ++ L +N L  ++   +++
Sbjct: 179 VSDFVISRIFEALAPLLGTALIYYVIVKILTLGLNALERRLRQSDRR 225



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 6/82 (7%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-----ANKLVAWICRVY 132
            + ++  Y    L G   T  ++   ++    +GT++   RL+      + L++ I  VY
Sbjct: 8   AFVAEQRYLLY-LDGLKVTILVSVIAILIGVALGTILALMRLTAEQKGKSTLLSKIAYVY 66

Query: 133 VEVFRNIPPLVVIFFLYKSVLS 154
           +++ R  P L  +  +Y  +L 
Sbjct: 67  IDIIRGTPTLTQLMIMYFVILK 88


>gi|322369616|ref|ZP_08044180.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haladaptatus paucihalophilus DX253]
 gi|320550786|gb|EFW92436.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haladaptatus paucihalophilus DX253]
          Length = 272

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 10/192 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R    K  +A+   Y+  F   G P L  +   + L+   P  G  NF         +
Sbjct: 91  LGRVSKTKFTRAVATCYVEFF--RGTPLLFQL---FVLYIGLPRFGIGNFSRW-----GW 140

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  I LS   AA+  E ++ G+ ++P GQMEAA +LG+++  A R ++LPQA R+ +  
Sbjct: 141 YAGIIGLSLNHAAYSGEAIKGGINSIPDGQMEAARSLGMSYISAMRKIILPQAFRNSLAA 200

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + +  + L+K++SL   +  ++L+S+   + +    A   +++    YL++++ +   + 
Sbjct: 201 VGNDQIILVKDTSLLSVIAVSELISLFRNVNSNQFDAWTPLVLVAIAYLAITLPLGKLVR 260

Query: 387 RLNAKIALKEKK 398
            L  + A  E++
Sbjct: 261 MLEERAAWGEQR 272



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 40/114 (35%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           ++ G   L     F I    V Y    +     +  +++   +     + + I G  +G 
Sbjct: 32  VAGGFSLLIAYVIFRILTDFVDYDLLVTIFPRFISTYIDVLVIVVVSSVLSLIGGVFIGL 91

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           GR+S  K    +   YVE FR  P L  +F LY  +               G+ 
Sbjct: 92  GRVSKTKFTRAVATCYVEFFRGTPLLFQLFVLYIGLPRFGIGNFSRWGWYAGII 145


>gi|15803805|ref|NP_289839.1| putative transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|15833397|ref|NP_312170.1| transport system permease protein [Escherichia coli O157:H7 str.
           Sakai]
 gi|12517901|gb|AAG58399.1|AE005554_10 putative transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13363616|dbj|BAB37566.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
          Length = 368

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y    ++  +                     T
Sbjct: 126 -----------YIAVWVVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|71736319|ref|YP_276040.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257486608|ref|ZP_05640649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|71556872|gb|AAZ36083.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320327103|gb|EFW83117.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330879087|gb|EGH13236.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|331010091|gb|EGH90147.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 248

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRL-----VSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|319777993|ref|YP_004134423.1| polar amino acid abc transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317171712|gb|ADV15249.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 324

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 8/175 (4%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I++F       L L+   Y ++   P   Q  F+ G+       +  +ALS    A++ E
Sbjct: 158 IASFYTSFFRGLPLLMQVYLIYLGLP---QLGFVVGAVP-----AGILALSLCYGAYMTE 209

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG+ ++ RGQ EA+ ++G       R ++LPQA+  IIPP  +Q++++LK+SSL   
Sbjct: 210 IFRSGIQSIDRGQWEASRSMGFGFSLTMRRIILPQALPVIIPPTGNQFISMLKDSSLVSV 269

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  +L+ +  T+  +T Q +E+++    IY  LSI + L  +R+    A  + +
Sbjct: 270 IGVWELMFLARTLGQKTFQHMEMLISASLIYWMLSICLELIQSRIERHYARSKVR 324


>gi|291279628|ref|YP_003496463.1| polar amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754330|dbj|BAI80707.1| polar amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 291

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 117/253 (46%), Gaps = 10/253 (3%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATR 206
                I  +      G  + N  +     T+  +    + S ++G +  +         R
Sbjct: 39  WQWEKILQYFFKEKDGKIVPNVIMIGVINTLKISIYSIILSTIIGFIFGIMKASKNTFFR 98

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE- 265
           L    + ++ + +P + +   + F L  + L     ++  +       +F+    +    
Sbjct: 99  LISISYVESIRNIPSIVVIFVVYFFLGDIFLKIFHIEMALNFLYTKYPDFLKLILIDKGK 158

Query: 266 ---FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F+   +ALS Y +A+I+EIV+  ++A+ + Q+++A +LG+   +  + ++LPQAM  
Sbjct: 159 AQVFVIGILALSLYESAYISEIVKGAILAIKKEQIDSAKSLGMNKWQRLKYIILPQAMPL 218

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           IIPPLT Q ++ +K+S++   +   +L   G  ++  T    EI +I   IYL ++ +++
Sbjct: 219 IIPPLTGQMVSTIKDSAILSVISIPELTFQGMELMASTYLIFEIWIIITVIYLLINTILS 278

Query: 383 LFMNRLNAKIALK 395
            F + L  ++  K
Sbjct: 279 HFSSFLEKRMTTK 291



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 49/108 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I++G +NT  ++   +I +TIIG + G  + S N     I   YVE  RNIP +VVIF 
Sbjct: 60  VIMIGVINTLKISIYSIILSTIIGFIFGIMKASKNTFFRLISISYVESIRNIPSIVVIFV 119

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +Y  +  +     H  +    ++          L     A++FV   +
Sbjct: 120 VYFFLGDIFLKIFHIEMALNFLYTKYPDFLKLILIDKGKAQVFVIGIL 167


>gi|52424276|ref|YP_087413.1| arginine transporter permease subunit ArtQ [Mannheimia
           succiniciproducens MBEL55E]
 gi|52306328|gb|AAU36828.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 223

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L   +        + V S + G+VL++F   L  +      K      I   L+ 
Sbjct: 1   MFFEYLPLMSTATLMTLGLAVCSLIAGLVLAIFFVVLETNKFVCVRKPTA---IFVTLLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +          G       F+   IAL+   AA+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIYFGSTELVEK----LTGEYIEFSPFLCGVIALAIIFAAYASQTLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ E+  ALGL+       ++LPQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AIPLGQWESGAALGLSRGYTFVNIILPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +   T Q          +YL ++++   FM +L  +    E+
Sbjct: 174 RQASLVNTNTHQPFTWYSFAALLYLIITLVSQFFMRKLEMRFTRFER 220


>gi|312278008|gb|ADQ62665.1| Amino acid (Glutamine) ABC transporter, permease protein
           [Streptococcus thermophilus ND03]
          Length = 226

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 114/235 (48%), Gaps = 9/235 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F     +       +T+  +  +  F  +LG+++SL     ++    K  + L  L
Sbjct: 1   MNFSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSL-----AKRSGIKPLEWLVSL 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F   G P +V I + + L        QF  +         +   I LS  + A+I+
Sbjct: 56  YVWVF--RGTPMVVQIMIAFNLIHMNLPTVQFGILNLDL--SRIVPGIIVLSLNSGAYIS 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G+ ++P+GQ+EAA +LG+      R V+LPQA+++I+P L ++++ ++K+SSL  
Sbjct: 112 ESVRAGIESIPKGQIEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQ 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  +L +   T+   T   +  +L   F YL ++  +   + ++  ++    K
Sbjct: 172 TIGVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGKGRK 226



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    + +    G + T  ++   +   TI+G LV   + S  K + W+  +YV VFR 
Sbjct: 3   FSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSLAKRSGIKPLEWLVSLYVWVFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDH 161
            P +V I   +  +   LP    
Sbjct: 63  TPMVVQIMIAFNLIHMNLPTVQF 85


>gi|300767622|ref|ZP_07077532.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|300494607|gb|EFK29765.1| glutamine ABC superfamily ATP binding cassette transporter,
           substrate binding and permease protein [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
          Length = 496

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 11/219 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      +    ++ V S +L  +L L    L      K G A+    I  F   G+P
Sbjct: 288 QNLDTIGSGLWMTLELTVISIILATILGLILGVLG-VMPGKLGPAISSTIIYIF--RGMP 344

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +VL    Y    D         IG     P F++  I L     A+    V+ G  AV 
Sbjct: 345 LMVLAFFIYIGFPDL--------IGHGFKIPAFVAGMITLMLNEGAYTGAFVKGGFAAVD 396

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQMEAA +LGL +  A R V++PQ +R +IP   +Q++  LK++S+   +G  +L   G
Sbjct: 397 DGQMEAARSLGLPYWTAMRKVIMPQGIRIMIPSFINQFIITLKDTSILSVIGIVELTQTG 456

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             II +  +  +I L+   IYL +  ++    N +  +I
Sbjct: 457 TLIIARNFEGFKIWLMIAIIYLIIITLLTWLSNWVQRRI 495



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 35/86 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I  G   T  L    +I ATI+G ++G   +   KL   I    + +FR +P +V+ 
Sbjct: 290 LDTIGSGLWMTLELTVISIILATILGLILGVLGVMPGKLGPAISSTIIYIFRGMPLMVLA 349

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL 171
           FF+Y     ++           GM  
Sbjct: 350 FFIYIGFPDLIGHGFKIPAFVAGMIT 375


>gi|222082848|ref|YP_002542213.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727527|gb|ACM30616.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 231

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 18/233 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            S    FG   N   L     T+           +LG VL+L      R    +  K L 
Sbjct: 4   WSWSGFFGYLFNPFILGGVFTTIWLTVVSLTAGLILGFVLALM-----RRSPFRLAKTLA 58

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI  F   G P LV +   Y        L QF             +  I L+   AA+
Sbjct: 59  KIYIWLF--RGTPLLVQLIALYT------ALPQFGIRFTVIE-----AALIGLALNEAAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ AVP GQ  AA ALG+T R+  R +++PQA + IIPPL +    LLK +S+
Sbjct: 106 LAEIIRAGIEAVPEGQARAARALGMTERQIMRHIVMPQAFKVIIPPLGNSVNGLLKTTSV 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +   +L+     +I +    +E+  +    YL L+ +     N +  +  
Sbjct: 166 TSVISMEELLRRTQVLIQEHFMVLELFAVAAIYYLLLTTLWDFVQNHIEKRFG 218



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T WL    +    I+G ++   R S  +L   + ++Y+ +FR  P LV +  L
Sbjct: 18  ILGGVFTTIWLTVVSLTAGLILGFVLALMRRSPFRLAKTLAKIYIWLFRGTPLLVQLIAL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y ++               G+ LN
Sbjct: 78  YTALPQFGIRFTVIEAALIGLALN 101


>gi|184155853|ref|YP_001844193.1| glutamate ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|183227197|dbj|BAG27713.1| glutamate ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
          Length = 229

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 9/234 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             +  F        L     TM  +    +  F++G+++ L      R    K    +  
Sbjct: 1   MHMFDFLGQYWPLFLEGTAQTMIISIIGVIIGFLIGLLMVLM-----RMSKVKPISWIAR 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YI   ++ G P+++ + L Y L      L Q   +G        +   IAL   + A+ 
Sbjct: 56  AYI--AIVRGTPSMIQVMLIYYLLARSLPLPQTQILGSGL--DRIIPGAIALGLNSGAYT 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RSG+I++P GQ EA ++LGL+ ++    ++LPQA+R+++P + ++++ L+K SS+ 
Sbjct: 112 AEIFRSGIISIPAGQTEAGLSLGLSQKETMFSIVLPQALRNVLPAMGNEFITLIKESSVL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +G  ++ +    +       I  +L+   IY  L+  +A  +  L  ++  K
Sbjct: 172 FYIGVQEITAEALGVGGTLYNFIPPLLVAAVIYFILTQAMAQLLGWLERRMGAK 225



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 50/117 (42%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y    L G   T  ++  G+I   +IG L+   R+S  K ++WI R Y+ + R 
Sbjct: 4   FDFLGQYWPLFLEGTAQTMIISIIGVIIGFLIGLLMVLMRMSKVKPISWIARAYIAIVRG 63

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            P ++ +  +Y  +   LP+P   I+      +    ++    +    A+IF    +
Sbjct: 64  TPSMIQVMLIYYLLARSLPLPQTQILGSGLDRIIPGAIALGLNSGAYTAEIFRSGII 120


>gi|16081000|ref|NP_391828.1| ABC transporter permease [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221311922|ref|ZP_03593769.1| hypothetical protein Bsubs1_21306 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221316246|ref|ZP_03598051.1| hypothetical protein BsubsN3_21217 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221321158|ref|ZP_03602452.1| hypothetical protein BsubsJ_21165 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325442|ref|ZP_03606736.1| hypothetical protein BsubsS_21316 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|1731314|sp|P54953|YXEN_BACSU RecName: Full=Probable amino-acid permease protein yxeN
 gi|1408499|dbj|BAA08330.1| yxeN [Bacillus subtilis]
 gi|2636495|emb|CAB15985.1| putative ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 224

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L                L  LYIS F   G+PTLV + L Y   +  P L     
Sbjct: 38  GLILALITKN-----KIPVLHQLSKLYISFF--RGVPTLVQLFLIY---YGLPQL----- 82

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
               +      +  I LS   AA++AEI R+ L +V  GQ+EA +++G+T  +A R ++L
Sbjct: 83  FPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+ IP   + ++ LLK +SLA  +G  ++ + G    +   +  E  L    +Y  
Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWV 202

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           L+I+ ++  +     ++   +
Sbjct: 203 LTIIYSILQDLFERAMSKPYR 223


>gi|296268320|ref|YP_003650952.1| polar amino acid ABC transporter inner membrane subunit
           [Thermobispora bispora DSM 43833]
 gi|296091107|gb|ADG87059.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobispora bispora DSM 43833]
          Length = 277

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 20/209 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              + F FVLG+VL+L      R       + +   YI  F   GLP LV+  +   L  
Sbjct: 80  ITGYAFGFVLGLVLALM-----RLSSVGPYRWIAATYIEIF--RGLPALVIFLMIINLPL 132

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P       + G           + L   +AA++AE  R+GL AVP+GQMEAA +LG+ 
Sbjct: 133 AFPGFRLPGDVYGQ--------AALGLGLVSAAYMAETFRAGLQAVPKGQMEAARSLGMP 184

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQ 362
           + +A   +++PQA+R +IPPLT++ + L K+SSL + +G     A+L   G         
Sbjct: 185 YMRAMVSIIIPQAVRIVIPPLTNELVLLFKDSSLVLFLGVTASQAELAKFGNDEAATFAN 244

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I  +    YL +++ +     RL A+
Sbjct: 245 PTPIF-VAGVTYLLITVPLGYLARRLEAR 272



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             V   NT     +G     ++G ++   RLS+     WI   Y+E+FR +P LV+   +
Sbjct: 68  FTVALKNTVIYTITGYAFGFVLGLVLALMRLSSVGPYRWIAATYIEIFRGLPALVIFLMI 127

Query: 149 YKSVLSVLPIPDHSIVL 165
               L+         V 
Sbjct: 128 INLPLAFPGFRLPGDVY 144


>gi|237798756|ref|ZP_04587217.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331021609|gb|EGI01666.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 248

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +  +Y+  F    +P
Sbjct: 24  WFISGLGWTVAIAVVAWIIALILGSVLGVMRTVPSRL-----VSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMRVIEKKVAV 239



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTVAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|254245861|ref|ZP_04939182.1| Amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|124870637|gb|EAY62353.1| Amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
          Length = 253

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 35  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 91

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 92  LLFYSIQIWLNQFTDLVGWNQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 151

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 152 GSAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 211

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 212 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 250



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 30  FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 89

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 90  MLLLFYSI 97


>gi|323467039|gb|ADX70726.1| Glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus H10]
          Length = 213

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+  +    +FS +LG+  +L           K GK +  +YI+ F    
Sbjct: 9   WGSFLTGFWNTILCSIIALIFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ + Y +                     F +  I L+ YT+AFIAE VR+G+ +
Sbjct: 62  IPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 IGTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I   T + I+  ++    YL L++ ++ +M  L  K+A
Sbjct: 171 QAQLIAFSTFRTIDTYVVVGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + L GF NT   +   +I + I+G       ++  K    + +VY+ +FRNIP LV++
Sbjct: 9   WGSFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
              Y  V   +           G+ L        T+    N+   
Sbjct: 69  MIFYLIVPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINSIGT 113


>gi|306843054|ref|ZP_07475678.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306286768|gb|EFM58316.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 323

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 8/175 (4%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +STF       L L+   Y ++   P +          V     +  +ALS    A++ E
Sbjct: 157 LSTFYTSLFRGLPLLMQIYIIYLGLPQI--------GYVIGAIPAGILALSLCYGAYMTE 208

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R+G+ ++P GQ EAA ALGL   +   LV+LPQAMR IIPP  +Q++ +LK+SSL   
Sbjct: 209 IFRAGIESIPHGQKEAATALGLGSAQTMWLVILPQAMRIIIPPTGNQFIAMLKDSSLVSV 268

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  +L+ V  T      + IE+++    IY  LSI      +R+    A   K+
Sbjct: 269 IGVWELMYVARTQGQTEFRHIEMLITASMIYWILSISFEFIQSRIERYYARYNKR 323


>gi|303240423|ref|ZP_07326940.1| polar amino acid ABC transporter, inner membrane subunit
           [Acetivibrio cellulolyticus CD2]
 gi|302591988|gb|EFL61719.1| polar amino acid ABC transporter, inner membrane subunit
           [Acetivibrio cellulolyticus CD2]
          Length = 236

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 90/185 (48%), Gaps = 12/185 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K    +   Y+  F   G P +V + + Y +                   P      +  
Sbjct: 63  KILNGICDFYVGLF--RGTPVVVQLLVAYYVILPL----------IGVNMPALNVCILVF 110

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              + A+++EI+R G+++V  GQMEA  ALGL++R     +++PQA+++I+P L ++++ 
Sbjct: 111 GFNSGAYVSEIMRGGIMSVDHGQMEAGRALGLSYRITMLKIVVPQAIKNILPTLGNEFIA 170

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K +S+   VG ADL      I   + + +   L+   IY+ L ++IA  +  +  ++ 
Sbjct: 171 LIKETSVVSFVGTADLYVAFNYIGTNSYEFMVPYLVMAIIYIVLVMIIASLIKIMERRLR 230

Query: 394 LKEKK 398
             +++
Sbjct: 231 KSDRR 235


>gi|260854102|ref|YP_003227993.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O26:H11 str. 11368]
 gi|260866977|ref|YP_003233379.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O111:H- str. 11128]
 gi|257752751|dbj|BAI24253.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O26:H11 str. 11368]
 gi|257763333|dbj|BAI34828.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O111:H- str. 11128]
 gi|323175570|gb|EFZ61165.1| glutamine transport system permease protein glnP [Escherichia coli
           1180]
          Length = 219

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      +YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVLYLIITLVLSFILRRLERRMKI 218



 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 66/210 (31%), Gaps = 4/210 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++                + +     ++               F   
Sbjct: 64  GTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREA 123

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L L      R+          L  +    I  +      +L   +   +        
Sbjct: 124 GLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKD---TSLFIVIGVAELTRQGQEI 180

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G+  + E  S    L       ++ I+R
Sbjct: 181 IAGNFRALEIWSAVAVLYLIITLVLSFILR 210


>gi|328956550|ref|YP_004373936.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp.
           17-4]
 gi|328672874|gb|AEB28920.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp.
           17-4]
          Length = 236

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ + + VL +V+ +    LS   H    +++  +Y+  F    +P ++ I   Y    
Sbjct: 30  LQVAILALVLSLVIGIIIGILS-TAHNLILRSIARVYVEIF--QNIPLVIQIFFMYN--- 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V  EF    + +  Y  A+I E+VR+G+++V +GQ EAA A G +
Sbjct: 84  --------GLAMAGLVLSEFTIGVVGVGLYHGAYIGEVVRAGILSVTKGQQEAAYAQGFS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R ++LPQ ++ I+PPLT+Q +NL+KN+S+   +  ADL+    +  + +      
Sbjct: 136 YTQTMRYIILPQMVKGILPPLTNQAVNLIKNTSVLAIIAGADLMYAADSYASFSLNYGPS 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++   +Y  L   +A F  +   K+   +
Sbjct: 196 YVVAGLLYFILCFPLATFSRKYEEKLKKND 225



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 45/85 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  +A   ++ + +IG ++G    + N ++  I RVYVE+F+NIP ++ IFF+
Sbjct: 22  FSSGFLRTLQVAILALVLSLVIGIIIGILSTAHNLILRSIARVYVEIFQNIPLVIQIFFM 81

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +     +   G+ L +
Sbjct: 82  YNGLAMAGLVLSEFTIGVVGVGLYH 106


>gi|320184056|gb|EFW58876.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella flexneri CDC 796-83]
          Length = 367

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+         +L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLVLLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLTLGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|293376247|ref|ZP_06622490.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|325845168|ref|ZP_08168477.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|292645139|gb|EFF63206.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|325488833|gb|EGC91233.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 253

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 101/226 (44%), Gaps = 15/226 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +    +T+       +   V+G+VL             K+ K L  +            
Sbjct: 25  FMYGIKMTLILAFLGTMLGLVIGLVLGGLRAITIEPRDLKSVKVLKKMMHC--------- 75

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             LI L        P++ Q  F+  +           +  + +S  T A++AEI+RSG+ 
Sbjct: 76  --LIGLYVWFFRGTPMMVQAMFLYHALRPILGWSSLTAGIVIISVNTGAYMAEIIRSGIQ 133

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQ+EAA ++G+T  ++   ++LPQA+++  P + ++++  +K+SS+   +G  ++ 
Sbjct: 134 SVDKGQLEAARSIGMTAFQSMMYIILPQAIKNAFPSIGNEFIVNIKDSSMLNVIGVIEVF 193

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               ++        E   I   IYL L+ + A  +  +  K+ +K+
Sbjct: 194 FQSKSVAGSVMLYSETFFITCLIYLVLTTITAQILGWIEKKMNVKK 239


>gi|55820684|ref|YP_139126.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55822575|ref|YP_141016.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55736669|gb|AAV60311.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55738560|gb|AAV62201.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 227

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 114/236 (48%), Gaps = 9/236 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            +   F     +       +T+  +  +  F  +LG+++SL     ++    K  + L  
Sbjct: 1   MMNFSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSL-----AKRSGIKPLEWLVS 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+  F   G P +V I + + L        QF  +         +   I LS  + A+I
Sbjct: 56  LYVWVF--RGTPMVVQIMIAFNLIHMNLPTVQFGILNLDL--SRIVPGIIVLSLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E VR+G+ ++P+GQ+EAA +LG+      R V+LPQA+++I+P L ++++ ++K+SSL 
Sbjct: 112 SESVRAGIESIPKGQIEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G  +L +   T+   T   +  +L   F YL ++  +   + ++  ++    K
Sbjct: 172 QTIGVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGKGRK 227



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    + +    G + T  ++   +   TI+G LV   + S  K + W+  +YV VFR 
Sbjct: 4   FSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSLAKRSGIKPLEWLVSLYVWVFRG 63

Query: 139 IPPLVVIFFLYKSVLSVLPIPDH 161
            P +V I   +  +   LP    
Sbjct: 64  TPMVVQIMIAFNLIHMNLPTVQF 86


>gi|311280312|ref|YP_003942543.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749507|gb|ADO49259.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 219

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 14/231 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V   V G+++ L A   +R +       + L++I
Sbjct: 1   MQFDWSAIWPAIPILLEGAKMTLWISVLGLVGGLIIGLVAG-FARTYGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              +I G P +V +   Y  L    P L              F +  + +   + A+IAE
Sbjct: 60  E--VIRGTPIVVQVMFIYFALPMALPDLR----------IDPFSAAVVTIMINSGAYIAE 107

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + 
Sbjct: 108 ITRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIV 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G A+L   G  II    +A+EI      IYL ++++++  + RL  ++ +
Sbjct: 168 IGVAELTRQGQEIIAGNFRALEIWSAVAVIYLLITLVLSFVLRRLERRMKI 218



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 1/134 (0%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G++   IIG + G  R     +   I  V++EV R
Sbjct: 4   DWSAIWPAIPILLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIANHIALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++   LP           + +     ++               F   
Sbjct: 64  GTPIVVQVMFIYFALPMALPDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEA 123

Query: 197 GIVLSLFATRLSRH 210
           G+ L L      RH
Sbjct: 124 GLALGLSRRETIRH 137


>gi|291534358|emb|CBL07470.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Roseburia intestinalis M50/1]
          Length = 230

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 98/222 (44%), Gaps = 15/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + SF +G+++++    L         K +  +YI  F   G P 
Sbjct: 24  FWPMLRQGLLYTIPLTLVSFAIGVIIAVL-CALFIINKIPVLKQIAGIYIWVF--RGTPL 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + + Y              I       ++++   ALS    A+ AE +R+ ++++ +
Sbjct: 81  LVQLFIMYW------------GICNPLGINKWVACISALSLNVGAYSAETIRAAILSINK 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA  +LG+++++  R +++PQA    IPPL + ++ L+K++SLA  +   ++     
Sbjct: 129 GQWEAGYSLGMSYQQTFRRIIIPQAATVSIPPLFNTFIGLVKDTSLASTIMIGEMFRKAQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                + + + I +    IYL    ++      +  K+ + +
Sbjct: 189 EAAASSLEYLWIYIEVALIYLLFCTLLTGLQKWIEKKLRVGK 230



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G + T  L         II  L     ++   ++  I  +Y+ VFR  P LV 
Sbjct: 24  FWPMLRQGLLYTIPLTLVSFAIGVIIAVLCALFIINKIPVLKQIAGIYIWVFRGTPLLVQ 83

Query: 145 IFFLY 149
           +F +Y
Sbjct: 84  LFIMY 88


>gi|223985124|ref|ZP_03635220.1| hypothetical protein HOLDEFILI_02526 [Holdemania filiformis DSM
           12042]
 gi|223962946|gb|EEF67362.1| hypothetical protein HOLDEFILI_02526 [Holdemania filiformis DSM
           12042]
          Length = 219

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + SF  G++L      L +    +  K +   YI  ++I G P 
Sbjct: 13  FWQILLPGLTMTIPLTILSFTFGLIL-ALLAALVQVAEIRVLKPIARFYI--WVIRGTPL 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + + +                   +   F S  I  S  T A+ AE +R+ + +VPR
Sbjct: 70  LVQLFVIFY-----------GLPSLGILLDAFPSAVIVFSVNTGAYAAETIRAAIESVPR 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EA    GLT+ +  R ++LPQAMR+   PL++  ++L+K++SLA  +   ++     
Sbjct: 119 GQLEAGYCAGLTYAQTMRRIILPQAMRTAFAPLSNSLISLVKDTSLAANITILEMFMASQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I  +T +   +      IYL    ++     RL  K+
Sbjct: 179 RIAARTYEPFALYCEVGLIYLLFCTVLTALQRRLETKM 216


>gi|167563477|ref|ZP_02356393.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           oklahomensis EO147]
          Length = 229

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    I L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLAAAIALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLMSWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GSAYGMSGMRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLKQLEKRYSIGVRH 226



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 36/82 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPLIWAGTVQTIELSVLSLAAAIALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +  L+ S+   L      +   
Sbjct: 66  MLLLFYSIQIWLNQFTDLMSWD 87


>gi|327194766|gb|EGE61608.1| nopaline ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 247

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 5/207 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S   G  +S+    L R        A  L Y   F   G P LV + L Y  
Sbjct: 17  LTLVLTFASLAAGFAVSVPLAFL-RASSNPWASAPVLAYTYAF--RGTPLLVQLFLIYYG 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P++ Q      + +   F   +IA +  +AA   E++R G+ AVPRGQ+EAA ALG
Sbjct: 74  IGQLPLVRQSFL--WAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQIEAAKALG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     RL++ P  +R  +P   ++ + +LK SSLA  +   ++  +   ++++T    
Sbjct: 132 LSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLVSETFAPY 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E+ +     YL L+++I      L  +
Sbjct: 192 EVFIAAGAFYLLLTLLITQGFQMLETR 218


>gi|229089484|ref|ZP_04220754.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-42]
 gi|228693870|gb|EEL47563.1| Amino acid ABC transproter, permease [Bacillus cereus Rock3-42]
          Length = 196

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 96/194 (49%), Gaps = 14/194 (7%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R  + K   ++  +YI   +I G P +V IA+ Y              I    V
Sbjct: 1   MLFAFFRISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVV 46

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R 
Sbjct: 47  FTPFWAGAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQ 106

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            IPPL +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++  
Sbjct: 107 SIPPLGNQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFT 166

Query: 383 LFMNRLNAKIALKE 396
             +N L  ++  KE
Sbjct: 167 YLVNLLEKRLQRKE 180


>gi|227820555|ref|YP_002824526.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339554|gb|ACP23773.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
          Length = 220

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 12/231 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
           M  +   +     T+    +I + + +LG  ++     +         + +         
Sbjct: 1   MEWDWEFVRQIMPTLIEGLQITILATILGAAVAAVIGLVFAILRMVAPRPIARATSFAVE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV +   + +  D                P  ++  I L  +   + AE+ R+
Sbjct: 61  FIRGTPLLVQLYFIFYVLPDI-----------GIRLPALVAGVIGLGIHYGTYAAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VPRGQ EAA A  LT R+    V+LPQA+  +IP L +  + + K + L  A+   
Sbjct: 110 GIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L++   +I N   + IE + +    +L +S++  +F+  L  + A  +++
Sbjct: 170 ELMNQAKSIANSNYRYIEPMTLVGVFFLVMSLISVIFLRWLEERYARVDER 220



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 34/90 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                ++ G   T      G   A +IG +    R+ A + +A      VE  R  P LV
Sbjct: 10  QIMPTLIEGLQITILATILGAAVAAVIGLVFAILRMVAPRPIARATSFAVEFIRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            ++F++  +  +       +    G+ ++ 
Sbjct: 70  QLYFIFYVLPDIGIRLPALVAGVIGLGIHY 99


>gi|163735166|ref|ZP_02142602.1| ABC transporter permease protein [Roseobacter litoralis Och 149]
 gi|161391624|gb|EDQ15957.1| ABC transporter permease protein [Roseobacter litoralis Och 149]
          Length = 221

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                   + +    +IFV   V G+ L L A  L+R+   +  +     +I  F     
Sbjct: 11  WEYREALWVGLINTLRIFVICLVAGLSLGL-AMGLARYSVRRWLRWPAACFIEFF--RNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I   +  +F  P+L  F            M+  + ++  +AAF AEI R G+  +
Sbjct: 68  PVLVQI---FWFYFAFPILAPFEI-------SALMAAALGITLNSAAFSAEIFRGGIQTI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EA  A+G+ +R+    ++LPQA+R ++P LT++ + + K ++LA A+ +AD++  
Sbjct: 118 DPGQWEAGRAIGMRYREIMARIILPQAVRRMMPALTNRGIEIFKMTTLASAIAYADVLHQ 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I +     IE   +    +  +   I      L  ++A  +
Sbjct: 178 ARLIASVNFNPIEAYTVVAVAFFVILYPIVRATYALERRLAKGD 221



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 38/81 (46%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S   Y  A+ VG +NT  +    ++    +G  +G  R S  + + W    ++E FR
Sbjct: 6   DFGSVWEYREALWVGLINTLRIFVICLVAGLSLGLAMGLARYSVRRWLRWPAACFIEFFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           N P LV IF+ Y +   + P 
Sbjct: 66  NTPVLVQIFWFYFAFPILAPF 86


>gi|152986551|ref|YP_001345801.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150961709|gb|ABR83734.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 230

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               F              S VLG+VL  F+  + R         +  +Y+S F   G P
Sbjct: 20  MAWPFLLQGAMYTVLFAAVSMVLGLVLG-FSVAVVRVTKVPLVSQIAAVYVSAF--RGTP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y                         +  +AL+   AA+++E +R  ++ + 
Sbjct: 77  LLVQIFVLYY-----------GLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGID 125

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA +++GLT  +    ++ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 126 KGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLAT 185

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +I +T Q + + L    IY  LS +       L  ++    ++
Sbjct: 186 KEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR 230



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 37/87 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G + T   A   M+   ++G  V   R++   LV+ I  VYV  FR  P LV I
Sbjct: 22  WPFLLQGAMYTVLFAAVSMVLGLVLGFSVAVVRVTKVPLVSQIAAVYVSAFRGTPLLVQI 81

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           F LY  + SV             + LN
Sbjct: 82  FVLYYGLPSVGIEFTPVTAGILALTLN 108


>gi|46580745|ref|YP_011553.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120601967|ref|YP_966367.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|46450165|gb|AAS96813.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562196|gb|ABM27940.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311234459|gb|ADP87313.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 230

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 18/240 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            +++         +  L    +++         +F LG+   L      R   +   +A 
Sbjct: 7   WNNMNYLLVGSYPDGPLGGMAMSILLAIGGIFGAFWLGLAFGLM-----RLSEKWWVRAP 61

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            ++Y+   +I G+P L+LI   Y L            I      PE  S  IA   +T A
Sbjct: 62  AIVYVE--VIRGIPLLMLIFWFYFLA----------PIALGHTLPEAESALIAFIVFTGA 109

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEIVR+G++A+P GQMEAA   GL+  +A   V+LPQA+R++IP   +Q+++L K++S
Sbjct: 110 YIAEIVRAGVLALPAGQMEAARGTGLSKTQAMLFVILPQALRNMIPSFVNQFVSLTKDTS 169

Query: 340 LAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA  +G ++L      + N+T     EI L    +Y  +  ++     RL  ++A  + +
Sbjct: 170 LAYIIGVSELTRTATQVNNRTLTAPTEIFLTIALMYFVICWVLTATSRRLEKQMARYQAR 229



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 38/90 (42%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            +++    + Y    SY    L G   +  LA  G+  A  +G   G  RLS    V   
Sbjct: 2   QWDVVWNNMNYLLVGSYPDGPLGGMAMSILLAIGGIFGAFWLGLAFGLMRLSEKWWVRAP 61

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
             VYVEV R IP L++IF+ Y      L  
Sbjct: 62  AIVYVEVIRGIPLLMLIFWFYFLAPIALGH 91


>gi|311031016|ref|ZP_07709106.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           sp. m3-13]
          Length = 222

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 113/225 (50%), Gaps = 17/225 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  L+   +T+   +   +  F++G +L+L      +    K  + L  +Y S F   G
Sbjct: 15  MDYILAGVKVTLQVVSLAGILGFIIGTLLALC-----KIGRVKLLRILADIYTSIF--RG 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P ++ + L +   F  P         G T+ P   +  +A    + A+I+E++R+G++A
Sbjct: 68  TPLVLQLMLIF---FGLPQAI------GITLEP-VTAAILAFGLNSGAYISEVIRAGIMA 117

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ EAA+ALG+ +R+  + ++LPQA+++I+P L ++Y+ L K S++   +G  D++ 
Sbjct: 118 VDKGQREAAMALGVPYRQMMKDIILPQALKNILPALMNEYITLTKESAIVTVIGVMDVMR 177

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 + T   +E  +    IY  L +++ L    +  ++   +
Sbjct: 178 RSFMTASNTYAYLEAFIFAGLIYYVLVMILTLIGKLIERRMRRYD 222



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            + +++ +     IL G   T  +     I   IIGTL+   ++   KL+  +  +Y  +
Sbjct: 5   FLDFSAITGSMDYILAGVKVTLQVVSLAGILGFIIGTLLALCKIGRVKLLRILADIYTSI 64

Query: 136 FRNIPPLVVIFFLYKSVLSV 155
           FR  P ++ +  ++  +   
Sbjct: 65  FRGTPLVLQLMLIFFGLPQA 84


>gi|28899840|ref|NP_799445.1| putative amino acid ABC transporter permease [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839888|ref|ZP_01992555.1| ABC-type glutamine transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|260361994|ref|ZP_05774999.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260876519|ref|ZP_05888874.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897424|ref|ZP_05905920.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260901309|ref|ZP_05909704.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28808092|dbj|BAC61329.1| putative amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746596|gb|EDM57584.1| ABC-type glutamine transport system, permease component [Vibrio
           parahaemolyticus AQ3810]
 gi|308087918|gb|EFO37613.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090376|gb|EFO40071.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308109853|gb|EFO47393.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308114174|gb|EFO51714.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
          Length = 246

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 67/235 (28%), Positives = 110/235 (46%), Gaps = 13/235 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               VL          L F     +   ++ + S    + L L    L       T K +
Sbjct: 22  WGWYVLDPSTEQGITNLKFLVAGFNDTIQVSLLSMCFAMTLGLLI-ALPALSRSPTLKWM 80

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +Y+   +I  +P LVL+     +++  P L   +          F +  IAL+   +A
Sbjct: 81  NRIYVE--VIRSIPVLVLLL---WVYYGMPTLLDVSL-------NHFWAGVIALTIAESA 128

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA R I+PPL +Q++ +LK SS
Sbjct: 129 FMAEVFRGGIQAINRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYVLKMSS 188

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L   +G +DL      ++      +EI    +  YL L + ++  +  L  +IA+
Sbjct: 189 LVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILFVSQAVRWLEKRIAI 243



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 39/70 (55%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    ++ GF +T  ++   M  A  +G L+    LS +  + W+ R+YVEV R+IP LV
Sbjct: 36  TNLKFLVAGFNDTIQVSLLSMCFAMTLGLLIALPALSRSPTLKWMNRIYVEVIRSIPVLV 95

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 96  LLLWVYYGMP 105


>gi|306846379|ref|ZP_07478926.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306273164|gb|EFM55064.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
          Length = 323

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 8/175 (4%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +STF       L L+   Y ++   P +          V     +  +ALS    A++ E
Sbjct: 157 LSTFYTSLFRGLPLLMQIYIIYLGLPQI--------GYVIGAIPAGILALSLCYGAYMTE 208

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R+G+ ++P GQ EAA ALGL   +   LV+LPQAMR IIPP  +Q++ +LK+SSL   
Sbjct: 209 IFRAGIESIPHGQKEAATALGLGSAQTMWLVILPQAMRIIIPPTGNQFIAMLKDSSLVSV 268

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  +L+ V  T      + IE+++    IY  LSI      +R+    A   K+
Sbjct: 269 IGVWELMYVARTQGQTEFRHIEMLITASMIYWILSISFEFIQSRIERYYARYNKR 323


>gi|238789650|ref|ZP_04633433.1| Arginine transport system permease protein artQ [Yersinia
           frederiksenii ATCC 33641]
 gi|238722203|gb|EEQ13860.1| Arginine transport system permease protein artQ [Yersinia
           frederiksenii ATCC 33641]
          Length = 238

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V + VLG+VL++       +R     +  TG     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALVLGLVLAMLFAVCESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNIDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLLVTLLSQYVLKWIELRTTRFER 235


>gi|331702184|ref|YP_004399143.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329129527|gb|AEB74080.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 212

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 63/181 (34%), Positives = 95/181 (52%), Gaps = 13/181 (7%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K  + +  +YI  F    +P LV+    Y +                     F S  I 
Sbjct: 45  NKFFRVIARVYIEVF--RNIPLLVITMFFYVV-----------IPMYIVEISGFASGTIG 91

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  Y++AFIAE VRSG+ +V  GQME A A GL+  +A R ++LPQA R +IPPL +Q++
Sbjct: 92  LILYSSAFIAETVRSGIQSVDPGQMEGARANGLSFWQAMRYIVLPQAFRYVIPPLGNQFI 151

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NL+KNSS+   V   DL+  G  I + + Q++   L    +YL L++ ++ +M  L  K+
Sbjct: 152 NLVKNSSVLAFVAGFDLMYQGNVIASDSLQSMSTYLCVGVLYLILTLPLSYYMRYLEKKL 211

Query: 393 A 393
           A
Sbjct: 212 A 212



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 39/90 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y   +L G   T   +   +I A IIG+      +  NK    I RVY+EVFRNIP L
Sbjct: 6   QNYGGELLYGLGQTLLCSIIALIFALIIGSGFAILEVVPNKFFRVIARVYIEVFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V+  F Y  +   +           G+ L 
Sbjct: 66  VITMFFYVVIPMYIVEISGFASGTIGLILY 95


>gi|302526371|ref|ZP_07278713.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
 gi|302435266|gb|EFL07082.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
          Length = 324

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 11/244 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P     +    F     L    LT++      VF  V GIVL+L      R       +
Sbjct: 62  NPVFQWDVFGYWFFRPVVLDGLLLTLELTGLAAVFGLVGGIVLALL-----RLSKNPLLQ 116

Query: 218 ALPLLYISTFLIFGLPTLVLIA-----LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
           A+   Y+  F    L  L+L       L   L    P    F     + V   F+   + 
Sbjct: 117 AVSWAYVWIFRSIPLIVLLLFLANVTALYSTLSLGIPFGPSFFSFSATDVLSFFVVAVLG 176

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ AEIVR+G+++V +GQ+EAA ALGL   +  R ++LPQA R+I+P   +Q +
Sbjct: 177 LSLNEAAYAAEIVRAGVLSVDQGQLEAAAALGLPRSRQYRRIILPQATRAIVPAYANQLI 236

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            LLK +S+       +L  V  T  +   GQ I ++L+    Y+ L+ ++++    +   
Sbjct: 237 GLLKGTSVVYITSLLELFGVVETQASTNSGQIIPLLLVGTVWYIILTSVLSVIQYYVERF 296

Query: 392 IALK 395
            +  
Sbjct: 297 FSRG 300



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             +   + G ++   RLS N L+  +   YV +FR+IP +V++ FL    
Sbjct: 93  AAVFGLVGGIVLALLRLSKNPLLQAVSWAYVWIFRSIPLIVLLLFLANVT 142


>gi|229816579|ref|ZP_04446878.1| hypothetical protein COLINT_03637 [Collinsella intestinalis DSM
           13280]
 gi|229807914|gb|EEP43717.1| hypothetical protein COLINT_03637 [Collinsella intestinalis DSM
           13280]
          Length = 247

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 11/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +        T+ +IF  + V  + L +    L R       + +   YIS  ++ G P 
Sbjct: 36  MMQMLGEGFITSLQIFALTLVGALPLGVVVVAL-RMCRFAPVRLIARAYIS--VMRGTPL 92

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ +   Y + F       + F    T S ++ +   A     AA+ AEI RSGL +VPR
Sbjct: 93  MLQMFAIYFMPF-------YVFGVQLTPSSKWQAAVFAFIVNYAAYFAEIYRSGLQSVPR 145

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG +  +    +++PQ ++ I+P + ++ + L+K++SLA A+G  ++ S   
Sbjct: 146 GQYEAAEVLGYSKFQTLVHIVVPQVVKRIMPAIGNEVITLVKDTSLAFAIGVGEMFSTAK 205

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++  +  ++   +I   IY + +  + L +  +  ++A   
Sbjct: 206 ALVA-SQVSMVPFVIAAAIYWAFNFAVELVLGSIEKRLAYYR 246



 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +  GF+ +  +    ++ A  +G +V A R+     V  I R Y+ V R  P ++
Sbjct: 35  TMMQMLGEGFITSLQIFALTLVGALPLGVVVVALRMCRFAPVRLIARAYISVMRGTPLML 94

Query: 144 VIFFLYKSVLSVLPIPDHSIVLP 166
            +F +Y     V  +        
Sbjct: 95  QMFAIYFMPFYVFGVQLTPSSKW 117


>gi|146320335|ref|YP_001200046.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|145691141|gb|ABP91646.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
          Length = 194

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 99/191 (51%), Gaps = 6/191 (3%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPVLGQFNFIGGST 261
                ++    K       +Y+  F   G P +V I + + + HF  P    F     + 
Sbjct: 1   MLLAFAQRSKYKVLAWTANIYVWIF--RGTPMIVQIMIAFAMTHFVAPT---FQLGILTV 55

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                +   I +S  + A+++E VR+G+ AVP+GQ+EAA +LG+  ++A R V++PQA++
Sbjct: 56  DLTRLIPGIIVISMNSGAYVSETVRAGINAVPKGQLEAAYSLGIRPKQAMRYVIMPQAIK 115

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +I+P L ++++ ++K+SSL   +G  +L +   T+ + +   +  ++     YL ++ ++
Sbjct: 116 NILPALGNEFVTIVKDSSLLSTIGVMELWNGAQTVQSTSYIPLTPLVFAASYYLIMTTVL 175

Query: 382 ALFMNRLNAKI 392
            + +     K+
Sbjct: 176 TVIIQSFEKKL 186


>gi|15800562|ref|NP_286574.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|15830142|ref|NP_308915.1| glutamine ABC transporter permease [Escherichia coli O157:H7 str.
           Sakai]
 gi|16128778|ref|NP_415331.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112178|ref|NP_706688.1| glutamine ABC transporter permease protein [Shigella flexneri 2a
           str. 301]
 gi|26246785|ref|NP_752825.1| glutamine ABC transporter permease [Escherichia coli CFT073]
 gi|30062294|ref|NP_836465.1| glutamine ABC transporter permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|74311353|ref|YP_309772.1| glutamine ABC transporter permease [Shigella sonnei Ss046]
 gi|82543256|ref|YP_407203.1| glutamine ABC transporter permease protein [Shigella boydii Sb227]
 gi|82776111|ref|YP_402458.1| glutamine ABC transporter permease protein [Shigella dysenteriae
           Sd197]
 gi|89107661|ref|AP_001441.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91209844|ref|YP_539830.1| glutamine ABC transporter permease [Escherichia coli UTI89]
 gi|110641014|ref|YP_668742.1| glutamine ABC transporter permease protein [Escherichia coli 536]
 gi|110804810|ref|YP_688330.1| glutamine ABC transporter permease [Shigella flexneri 5 str. 8401]
 gi|117622991|ref|YP_851904.1| glutamine ABC transporter permease protein [Escherichia coli APEC
           O1]
 gi|157157493|ref|YP_001462004.1| glutamine ABC transporter permease protein [Escherichia coli
           E24377A]
 gi|157160287|ref|YP_001457605.1| glutamine ABC transporter permease protein [Escherichia coli HS]
 gi|168749989|ref|ZP_02775011.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168764283|ref|ZP_02789290.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168777206|ref|ZP_02802213.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168779357|ref|ZP_02804364.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787026|ref|ZP_02812033.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|168799913|ref|ZP_02824920.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|170020834|ref|YP_001725788.1| glutamine ABC transporter permease protein [Escherichia coli ATCC
           8739]
 gi|170080469|ref|YP_001729789.1| glutamine ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|170683637|ref|YP_001742914.1| glutamine ABC transporter permease [Escherichia coli SMS-3-5]
 gi|188493452|ref|ZP_03000722.1| glutamine ABC transporter, permease protein [Escherichia coli
           53638]
 gi|191166172|ref|ZP_03028006.1| glutamine ABC transporter, permease protein [Escherichia coli B7A]
 gi|191173751|ref|ZP_03035274.1| glutamine ABC transporter, permease protein [Escherichia coli F11]
 gi|193064434|ref|ZP_03045515.1| glutamine ABC transporter, permease protein [Escherichia coli E22]
 gi|193069376|ref|ZP_03050331.1| glutamine ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194428172|ref|ZP_03060715.1| glutamine ABC transporter, permease protein [Escherichia coli B171]
 gi|194438438|ref|ZP_03070528.1| glutamine ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|195936851|ref|ZP_03082233.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809031|ref|ZP_03251368.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815025|ref|ZP_03256204.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822695|ref|ZP_03263014.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209399532|ref|YP_002269480.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209918057|ref|YP_002292141.1| glutamine ABC transporter permease [Escherichia coli SE11]
 gi|215485897|ref|YP_002328328.1| glutamine ABC transporter permease protein [Escherichia coli
           O127:H6 str. E2348/69]
 gi|217324127|ref|ZP_03440211.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|218553396|ref|YP_002386309.1| glutamine ABC transporter permease [Escherichia coli IAI1]
 gi|218557715|ref|YP_002390628.1| glutamine ABC transporter permease protein [Escherichia coli S88]
 gi|218688596|ref|YP_002396808.1| glutamine ABC transporter permease [Escherichia coli ED1a]
 gi|218694284|ref|YP_002401951.1| glutamine ABC transporter permease protein [Escherichia coli 55989]
 gi|218699184|ref|YP_002406813.1| glutamine ABC transporter permease [Escherichia coli IAI39]
 gi|218704188|ref|YP_002411707.1| glutamine ABC transporter permease protein [Escherichia coli
           UMN026]
 gi|227884227|ref|ZP_04002032.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Escherichia coli 83972]
 gi|237707230|ref|ZP_04537711.1| glutamine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|238900069|ref|YP_002925865.1| glutamine transporter subunit [Escherichia coli BW2952]
 gi|253774187|ref|YP_003037018.1| glutamine ABC transporter permease [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160887|ref|YP_003043995.1| glutamine ABC transporter permease [Escherichia coli B str. REL606]
 gi|254792005|ref|YP_003076842.1| glutamine ABC transporter permease [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021119|ref|ZP_05434984.1| glutamine ABC transporter permease protein [Shigella sp. D9]
 gi|256023594|ref|ZP_05437459.1| glutamine ABC transporter permease protein [Escherichia sp.
           4_1_40B]
 gi|260843053|ref|YP_003220831.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O103:H2 str. 12009]
 gi|261225459|ref|ZP_05939740.1| glutamine transporter subunit; membrane component of ABC
           superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258572|ref|ZP_05951105.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291281807|ref|YP_003498625.1| Glutamine transport system permease protein glnP [Escherichia coli
           O55:H7 str. CB9615]
 gi|293404110|ref|ZP_06648104.1| glnP [Escherichia coli FVEC1412]
 gi|293409186|ref|ZP_06652762.1| glnP [Escherichia coli B354]
 gi|293433071|ref|ZP_06661499.1| glnP [Escherichia coli B088]
 gi|300816458|ref|ZP_07096680.1| glutamine ABC transporter permease protein [Escherichia coli MS
           107-1]
 gi|300824271|ref|ZP_07104388.1| glutamine ABC transporter permease protein [Escherichia coli MS
           119-7]
 gi|300898302|ref|ZP_07116652.1| glutamine ABC transporter permease protein [Escherichia coli MS
           198-1]
 gi|300907140|ref|ZP_07124805.1| glutamine ABC transporter permease protein [Escherichia coli MS
           84-1]
 gi|300920060|ref|ZP_07136518.1| glutamine ABC transporter permease protein [Escherichia coli MS
           115-1]
 gi|300922835|ref|ZP_07138921.1| glutamine ABC transporter permease protein [Escherichia coli MS
           182-1]
 gi|300929386|ref|ZP_07144856.1| glutamine ABC transporter permease protein [Escherichia coli MS
           187-1]
 gi|300939847|ref|ZP_07154484.1| glutamine ABC transporter permease protein [Escherichia coli MS
           21-1]
 gi|300947106|ref|ZP_07161322.1| glutamine ABC transporter permease protein [Escherichia coli MS
           116-1]
 gi|300957009|ref|ZP_07169258.1| glutamine ABC transporter permease protein [Escherichia coli MS
           175-1]
 gi|300993337|ref|ZP_07180353.1| glutamine ABC transporter permease protein [Escherichia coli MS
           45-1]
 gi|301027259|ref|ZP_07190618.1| glutamine ABC transporter permease protein [Escherichia coli MS
           196-1]
 gi|301051267|ref|ZP_07198095.1| glutamine ABC transporter permease protein [Escherichia coli MS
           185-1]
 gi|301303568|ref|ZP_07209690.1| glutamine ABC transporter permease protein [Escherichia coli MS
           124-1]
 gi|301328004|ref|ZP_07221167.1| glutamine ABC transporter permease protein [Escherichia coli MS
           78-1]
 gi|301646242|ref|ZP_07246137.1| glutamine ABC transporter permease protein [Escherichia coli MS
           146-1]
 gi|306812787|ref|ZP_07446980.1| glutamine ABC transporter permease protein [Escherichia coli NC101]
 gi|307137435|ref|ZP_07496791.1| glutamine ABC transporter permease protein [Escherichia coli H736]
 gi|307313780|ref|ZP_07593397.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309786523|ref|ZP_07681146.1| glutamine transport system permease protein glnP [Shigella
           dysenteriae 1617]
 gi|309798040|ref|ZP_07692416.1| glutamine ABC transporter permease protein [Escherichia coli MS
           145-7]
 gi|312969166|ref|ZP_07783373.1| glutamine transport system permease protein glnP [Escherichia coli
           2362-75]
 gi|312970887|ref|ZP_07785066.1| glutamine transport system permease protein glnP [Escherichia coli
           1827-70]
 gi|331641326|ref|ZP_08342461.1| glutamine transport system permease protein GlnP [Escherichia coli
           H736]
 gi|331646029|ref|ZP_08347132.1| glutamine transport system permease protein GlnP [Escherichia coli
           M605]
 gi|331651819|ref|ZP_08352838.1| glutamine transport system permease protein GlnP [Escherichia coli
           M718]
 gi|331656831|ref|ZP_08357793.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA206]
 gi|331662167|ref|ZP_08363090.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA143]
 gi|331667179|ref|ZP_08368044.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA271]
 gi|331672316|ref|ZP_08373107.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA280]
 gi|331676548|ref|ZP_08377244.1| glutamine transport system permease protein GlnP [Escherichia coli
           H591]
 gi|331682317|ref|ZP_08382936.1| glutamine transport system permease protein GlnP [Escherichia coli
           H299]
 gi|84028669|sp|P0AEQ8|GLNP_ECO57 RecName: Full=Glutamine transport system permease protein glnP
 gi|84028670|sp|P0AEQ7|GLNP_ECOL6 RecName: Full=Glutamine transport system permease protein glnP
 gi|84028671|sp|P0AEQ6|GLNP_ECOLI RecName: Full=Glutamine transport system permease protein glnP
 gi|84028672|sp|P0AEQ9|GLNP_SHIFL RecName: Full=Glutamine transport system permease protein glnP
 gi|12513809|gb|AAG55182.1|AE005262_2 glutamine high-affinity transport system; membrane component
           [Escherichia coli O157:H7 str. EDL933]
 gi|26107184|gb|AAN79368.1|AE016757_272 Glutamine transport system permease protein glnP [Escherichia coli
           CFT073]
 gi|41572|emb|CAA32383.1| unnamed protein product [Escherichia coli K-12]
 gi|1787030|gb|AAC73897.1| glutamine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|4062376|dbj|BAA35482.1| glutamine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|13360347|dbj|BAB34311.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli O157:H7 str. Sakai]
 gi|24051018|gb|AAN42395.1| glutamine transport protein GlnP [Shigella flexneri 2a str. 301]
 gi|30040539|gb|AAP16271.1| glutamine transport protein GlnP [Shigella flexneri 2a str. 2457T]
 gi|73854830|gb|AAZ87537.1| glutamine high-affinity transport system membrane component
           [Shigella sonnei Ss046]
 gi|81240259|gb|ABB60969.1| glutamine high-affinity transport system, membrane component
           [Shigella dysenteriae Sd197]
 gi|81244667|gb|ABB65375.1| glutamine high-affinity transport system, membrane component
           [Shigella boydii Sb227]
 gi|91071418|gb|ABE06299.1| glutamine transport system permease protein glnP [Escherichia coli
           UTI89]
 gi|110342606|gb|ABG68843.1| glutamine transport system permease protein GlnP [Escherichia coli
           536]
 gi|110614358|gb|ABF03025.1| glutamine high-affinity transport system [Shigella flexneri 5 str.
           8401]
 gi|115512115|gb|ABJ00190.1| glutamine transport protein GlnP [Escherichia coli APEC O1]
 gi|157065967|gb|ABV05222.1| glutamine ABC transporter, permease protein [Escherichia coli HS]
 gi|157079523|gb|ABV19231.1| glutamine ABC transporter, permease protein [Escherichia coli
           E24377A]
 gi|169755762|gb|ACA78461.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169888304|gb|ACB02011.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Escherichia coli str. K-12 substr. DH10B]
 gi|170521355|gb|ACB19533.1| glutamine ABC transporter, permease protein [Escherichia coli
           SMS-3-5]
 gi|187767493|gb|EDU31337.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188015705|gb|EDU53827.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188488651|gb|EDU63754.1| glutamine ABC transporter, permease protein [Escherichia coli
           53638]
 gi|189002956|gb|EDU71942.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189365687|gb|EDU84103.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189373069|gb|EDU91485.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189377797|gb|EDU96213.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC508]
 gi|190903781|gb|EDV63496.1| glutamine ABC transporter, permease protein [Escherichia coli B7A]
 gi|190906001|gb|EDV65617.1| glutamine ABC transporter, permease protein [Escherichia coli F11]
 gi|192928896|gb|EDV82509.1| glutamine ABC transporter, permease protein [Escherichia coli E22]
 gi|192957329|gb|EDV87777.1| glutamine ABC transporter, permease protein [Escherichia coli
           E110019]
 gi|194413732|gb|EDX30011.1| glutamine ABC transporter, permease protein [Escherichia coli B171]
 gi|194422662|gb|EDX38659.1| glutamine ABC transporter, permease protein [Escherichia coli
           101-1]
 gi|208728832|gb|EDZ78433.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208731673|gb|EDZ80361.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738180|gb|EDZ85863.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160932|gb|ACI38365.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209775798|gb|ACI86211.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209775800|gb|ACI86212.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209775802|gb|ACI86213.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209775804|gb|ACI86214.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209775806|gb|ACI86215.1| membrane component of glutamine high-affinity transport system
           [Escherichia coli]
 gi|209911316|dbj|BAG76390.1| glutamine ABC transporter permease component [Escherichia coli
           SE11]
 gi|215263969|emb|CAS08310.1| glutamine transporter subunit [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217320348|gb|EEC28772.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|218351016|emb|CAU96720.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218360164|emb|CAQ97713.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218364484|emb|CAR02166.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218369170|emb|CAR16925.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218426160|emb|CAR06980.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|218431285|emb|CAR12163.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|222032540|emb|CAP75279.1| glutamine transport system permease protein glnP [Escherichia coli
           LF82]
 gi|226898440|gb|EEH84699.1| glutamine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|227838979|gb|EEJ49445.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Escherichia coli 83972]
 gi|238861340|gb|ACR63338.1| glutamine transporter subunit [Escherichia coli BW2952]
 gi|242376602|emb|CAQ31311.1| glnP, subunit of glutamine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325231|gb|ACT29833.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972788|gb|ACT38459.1| glutamine ABC transporter permease protein [Escherichia coli B str.
           REL606]
 gi|253977008|gb|ACT42678.1| glutamine ABC transporter permease protein [Escherichia coli
           BL21(DE3)]
 gi|254591405|gb|ACT70766.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257758200|dbj|BAI29697.1| glutamine high-affinity transport system, membrane component
           [Escherichia coli O103:H2 str. 12009]
 gi|260450043|gb|ACX40465.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177946|dbj|BAI54276.1| glutamine ABC transporter permease component [Escherichia coli
           SE15]
 gi|281600135|gb|ADA73119.1| Glutamine transport system permease protein glnP [Shigella flexneri
           2002017]
 gi|284920662|emb|CBG33725.1| glutamine ABC transporter, permease protein [Escherichia coli 042]
 gi|290761680|gb|ADD55641.1| Glutamine transport system permease protein glnP [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323890|gb|EFE63312.1| glnP [Escherichia coli B088]
 gi|291428696|gb|EFF01721.1| glnP [Escherichia coli FVEC1412]
 gi|291469654|gb|EFF12138.1| glnP [Escherichia coli B354]
 gi|294492644|gb|ADE91400.1| glutamine ABC transporter, permease protein [Escherichia coli
           IHE3034]
 gi|299879364|gb|EFI87575.1| glutamine ABC transporter permease protein [Escherichia coli MS
           196-1]
 gi|300297084|gb|EFJ53469.1| glutamine ABC transporter permease protein [Escherichia coli MS
           185-1]
 gi|300316228|gb|EFJ66012.1| glutamine ABC transporter permease protein [Escherichia coli MS
           175-1]
 gi|300358026|gb|EFJ73896.1| glutamine ABC transporter permease protein [Escherichia coli MS
           198-1]
 gi|300401107|gb|EFJ84645.1| glutamine ABC transporter permease protein [Escherichia coli MS
           84-1]
 gi|300406630|gb|EFJ90168.1| glutamine ABC transporter permease protein [Escherichia coli MS
           45-1]
 gi|300412926|gb|EFJ96236.1| glutamine ABC transporter permease protein [Escherichia coli MS
           115-1]
 gi|300420867|gb|EFK04178.1| glutamine ABC transporter permease protein [Escherichia coli MS
           182-1]
 gi|300453255|gb|EFK16875.1| glutamine ABC transporter permease protein [Escherichia coli MS
           116-1]
 gi|300455311|gb|EFK18804.1| glutamine ABC transporter permease protein [Escherichia coli MS
           21-1]
 gi|300462651|gb|EFK26144.1| glutamine ABC transporter permease protein [Escherichia coli MS
           187-1]
 gi|300523245|gb|EFK44314.1| glutamine ABC transporter permease protein [Escherichia coli MS
           119-7]
 gi|300531148|gb|EFK52210.1| glutamine ABC transporter permease protein [Escherichia coli MS
           107-1]
 gi|300841067|gb|EFK68827.1| glutamine ABC transporter permease protein [Escherichia coli MS
           124-1]
 gi|300845496|gb|EFK73256.1| glutamine ABC transporter permease protein [Escherichia coli MS
           78-1]
 gi|301075539|gb|EFK90345.1| glutamine ABC transporter permease protein [Escherichia coli MS
           146-1]
 gi|305853550|gb|EFM53989.1| glutamine ABC transporter permease protein [Escherichia coli NC101]
 gi|306906420|gb|EFN36934.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307552655|gb|ADN45430.1| glutamine transport system permease protein [Escherichia coli ABU
           83972]
 gi|307627780|gb|ADN72084.1| glutamine ABC transporter permease protein [Escherichia coli UM146]
 gi|308118370|gb|EFO55632.1| glutamine ABC transporter permease protein [Escherichia coli MS
           145-7]
 gi|308925586|gb|EFP71070.1| glutamine transport system permease protein glnP [Shigella
           dysenteriae 1617]
 gi|309701088|emb|CBJ00386.1| glutamine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|310336648|gb|EFQ01815.1| glutamine transport system permease protein glnP [Escherichia coli
           1827-70]
 gi|312286568|gb|EFR14481.1| glutamine transport system permease protein glnP [Escherichia coli
           2362-75]
 gi|312945328|gb|ADR26155.1| glutamine ABC transporter permease protein [Escherichia coli O83:H1
           str. NRG 857C]
 gi|313650289|gb|EFS14701.1| glutamine transport system permease protein glnP [Shigella flexneri
           2a str. 2457T]
 gi|315060046|gb|ADT74373.1| glutamine transporter subunit [Escherichia coli W]
 gi|315135460|dbj|BAJ42619.1| glutamine transport system permease protein glnP [Escherichia coli
           DH1]
 gi|315257799|gb|EFU37767.1| glutamine ABC transporter permease protein [Escherichia coli MS
           85-1]
 gi|315287229|gb|EFU46641.1| glutamine ABC transporter permease protein [Escherichia coli MS
           110-3]
 gi|315292587|gb|EFU51939.1| glutamine ABC transporter permease protein [Escherichia coli MS
           153-1]
 gi|315299324|gb|EFU58576.1| glutamine ABC transporter permease protein [Escherichia coli MS
           16-3]
 gi|315619814|gb|EFV00333.1| glutamine transport system permease protein glnP [Escherichia coli
           3431]
 gi|320177301|gb|EFW52305.1| Glutamate transport membrane-spanning protein [Shigella dysenteriae
           CDC 74-1112]
 gi|320183305|gb|EFW58160.1| Glutamate transport membrane-spanning protein [Shigella flexneri
           CDC 796-83]
 gi|320192713|gb|EFW67354.1| Glutamate transport membrane-spanning protein [Escherichia coli
           O157:H7 str. EC1212]
 gi|320196694|gb|EFW71317.1| Glutamate transport membrane-spanning protein [Escherichia coli
           WV_060327]
 gi|320198999|gb|EFW73596.1| Glutamate transport membrane-spanning protein [Escherichia coli
           EC4100B]
 gi|320637673|gb|EFX07465.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320642799|gb|EFX12000.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320648255|gb|EFX16910.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320654092|gb|EFX22160.1| glutamine ABC transporter permease protein [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320659715|gb|EFX27271.1| glutamine ABC transporter permease protein [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320664186|gb|EFX31337.1| glutamine ABC transporter permease protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323159629|gb|EFZ45608.1| glutamine transport system permease protein glnP [Escherichia coli
           E128010]
 gi|323185034|gb|EFZ70400.1| glutamine transport system permease protein glnP [Escherichia coli
           1357]
 gi|323190938|gb|EFZ76205.1| glutamine transport system permease protein glnP [Escherichia coli
           RN587/1]
 gi|323379395|gb|ADX51663.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323938165|gb|EGB34425.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1520]
 gi|323942683|gb|EGB38848.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E482]
 gi|323947104|gb|EGB43116.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H120]
 gi|323953527|gb|EGB49393.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H252]
 gi|323958099|gb|EGB53808.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H263]
 gi|323963057|gb|EGB58628.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H489]
 gi|323967412|gb|EGB62833.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli M863]
 gi|323971976|gb|EGB67197.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TA007]
 gi|323976804|gb|EGB71892.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TW10509]
 gi|324009667|gb|EGB78886.1| glutamine ABC transporter permease protein [Escherichia coli MS
           57-2]
 gi|324013099|gb|EGB82318.1| glutamine ABC transporter permease protein [Escherichia coli MS
           60-1]
 gi|324018515|gb|EGB87734.1| glutamine ABC transporter permease protein [Escherichia coli MS
           117-3]
 gi|324116234|gb|EGC10156.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1167]
 gi|326338302|gb|EGD62131.1| Glutamate transport membrane-spanning protein [Escherichia coli
           O157:H7 str. 1125]
 gi|326346280|gb|EGD70018.1| Glutamate transport membrane-spanning protein [Escherichia coli
           O157:H7 str. 1044]
 gi|327253597|gb|EGE65226.1| glutamine transport system permease protein glnP [Escherichia coli
           STEC_7v]
 gi|330910554|gb|EGH39064.1| glutamate transport membrane-spanning protein [Escherichia coli
           AA86]
 gi|331038124|gb|EGI10344.1| glutamine transport system permease protein GlnP [Escherichia coli
           H736]
 gi|331044781|gb|EGI16908.1| glutamine transport system permease protein GlnP [Escherichia coli
           M605]
 gi|331050097|gb|EGI22155.1| glutamine transport system permease protein GlnP [Escherichia coli
           M718]
 gi|331055079|gb|EGI27088.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA206]
 gi|331060589|gb|EGI32553.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA143]
 gi|331065535|gb|EGI37428.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA271]
 gi|331070511|gb|EGI41875.1| glutamine transport system permease protein GlnP [Escherichia coli
           TA280]
 gi|331075237|gb|EGI46535.1| glutamine transport system permease protein GlnP [Escherichia coli
           H591]
 gi|331079948|gb|EGI51127.1| glutamine transport system permease protein GlnP [Escherichia coli
           H299]
 gi|332097551|gb|EGJ02531.1| glutamine transport system permease protein glnP [Shigella boydii
           3594-74]
 gi|332104698|gb|EGJ08044.1| glutamine transporter GlnP [Shigella sp. D9]
          Length = 219

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|294501175|ref|YP_003564875.1| arginine ABC transporter permease ArtQ [Bacillus megaterium QM
           B1551]
 gi|294351112|gb|ADE71441.1| arginine ABC transporter, permease protein ArtQ [Bacillus
           megaterium QM B1551]
          Length = 219

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          + +    +    +I + S +LG VL +    L +    K  +     Y 
Sbjct: 1   MNLDFSQIVPSMPYILKGIGVTIQIVLASAILGFVLGVIL-SLCKISRNKPLQWFADAYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P ++ + L Y   F  P L  F+                A    +AA+I+EI
Sbjct: 60  SVF--RGTPLVLQLLLIY---FGLPQLLGFDIAPFPAA-------VAAFGLNSAAYISEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G++AV +GQ EAA+ALG+ +R+    ++LPQA+++I+P L ++++ L K S++   +
Sbjct: 108 IRAGILAVDKGQREAALALGIPYRRMMGQIILPQALKNILPALMNEFITLTKESAIVTVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++     +  +    +E ++    IY  + + + L    +  ++   +
Sbjct: 168 GALDIMRRAYIVGGEKFAYLEPLIFAGLIYYVMVMGLTLLGKAVERRMRKGD 219



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++        IL G   T  +  +  I   ++G ++   ++S NK + W    Y  VF
Sbjct: 3   LDFSQIVPSMPYILKGIGVTIQIVLASAILGFVLGVILSLCKISRNKPLQWFADAYTSVF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P ++ +  +Y  +  +
Sbjct: 63  RGTPLVLQLLLIYFGLPQL 81


>gi|326803927|ref|YP_004321745.1| putative glutamate/glutamine/aspartate/asparagine transport system
           permease protein BztB [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650859|gb|AEA01042.1| putative glutamate/glutamine/aspartate/asparagine transport system
           permease protein BztB [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 213

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            ++        T+  +    VFS V+G ++ +      +  H K  + L  +Y+  F   
Sbjct: 8   YSSELFLGFKNTIMVSVLALVFSLVIGSLVGIM-----QTSHPKGLRMLGDIYVEFFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  +V+       +   P+               F +  I L+ YT+AFIA++VRSG+ 
Sbjct: 63  PLLIIVMFF-----YVVVPLYW--------VKLNGFTAGLIGLTIYTSAFIADVVRSGIE 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQMEA ++ G T  +    ++ PQA+R +IPPL +Q++NL+KNSS+   V   DL+
Sbjct: 110 AVPHGQMEAGLSQGFTATETMVYIIFPQAVRIVIPPLGNQFINLVKNSSILAMVAGLDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  I ++T    +  ++    YL L+I +   M  L  +++
Sbjct: 170 YFGDLIASETFNTFDSYILVALFYLVLTIPLTALMQYLERRLS 212



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 51/109 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   ++Y++ + +GF NT  ++   ++ + +IG+LVG  + S  K +  +  +YVE FRN
Sbjct: 2   FQLLNNYSSELFLGFKNTIMVSVLALVFSLVIGSLVGIMQTSHPKGLRMLGDIYVEFFRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           IP L+++ F Y  V       +       G+ +         +     A
Sbjct: 62  IPLLIIVMFFYVVVPLYWVKLNGFTAGLIGLTIYTSAFIADVVRSGIEA 110


>gi|313894065|ref|ZP_07827631.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313441629|gb|EFR60055.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 218

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 16/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            +++ S   GI++++   RLS+           L+    +L+ G P ++ I   Y   + 
Sbjct: 25  IVWILSIPGGILMAML--RLSKLPLVDK-----LVDAFVYLMRGTPLMLQILFVY---YA 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P++       G+    +  +  +      AA++ EI R G+ ++ RGQ E A  LG T+
Sbjct: 75  LPIIT-----DGAIQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQ  + ++PPL ++ +NLLK++SL   +   D++ +  +I+ +    I   
Sbjct: 130 SQTMRKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD-ISAF 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+    YL  + ++    N L  + A+ E
Sbjct: 189 LVAAIFYLIFTFILTNIFNYLERRFAVYE 217



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L     I +   G L+   RLS   LV  +   +V + R  P ++ I F+
Sbjct: 12  IADGLKVTVSLFCIVWILSIPGGILMAMLRLSKLPLVDKLVDAFVYLMRGTPLMLQILFV 71

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 72  YYALP 76


>gi|227524183|ref|ZP_03954232.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088653|gb|EEI23965.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
          Length = 242

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 17/219 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS    TM        F+ + GIV+ L      + F+  +        I  +L  G+P L
Sbjct: 41  LSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSS-------ILIYLFRGMPLL 93

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL    Y      P L            P F++  + L+    A+IA  V+ G+ AV  G
Sbjct: 94  VLALFIYT---GIPSLTG-------EKIPAFVAGVVTLTFNEGAYIAAFVKGGIQAVDPG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA +LGL   K+ R V+LPQ +R +IP   +Q++  LK++S+   +G  +L   G  
Sbjct: 144 QMEAARSLGLPFGKSMRKVILPQGIRIMIPSFINQFIITLKDTSILSIIGLLELTQTGKI 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           II +  +  ++  I   +YL +  ++    N +  +  +
Sbjct: 204 IIARNLEGFKVWTIVALMYLIIITLLTWLSNWVQRRTKV 242



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 37/77 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T WL    +  ATI G +VG   +   K   W+  + + +FR +P LV+  F
Sbjct: 39  ALLSGLKETMWLTVVSIFFATIFGIVVGLMGVVPGKFFNWLSSILIYLFRGMPLLVLALF 98

Query: 148 LYKSVLSVLPIPDHSIV 164
           +Y  + S+      + V
Sbjct: 99  IYTGIPSLTGEKIPAFV 115


>gi|330889550|gb|EGH22211.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 248

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRL-----VSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLLIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +   Y  V  +LP          
Sbjct: 78  LVQLLIWYFLVPDLLPENLQEWYKQD 103


>gi|307544138|ref|YP_003896617.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216162|emb|CBV41432.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 243

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 9/237 (3%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKT 215
           +      L        + LS+    + T  ++   S ++G+VL+  L   R S+H   + 
Sbjct: 5   MNWLQAQLADNSIFTLQTLSYYGEGLVTTVQLVFLSLIIGLVLAVPLAIGRGSKHAWIRL 64

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
                 ++   ++  G P LV + L Y        +   +      +   F+   IA + 
Sbjct: 65  P-----IFFYCYVFRGTPLLVQLYLIYYGVVFVEGIQ--DTWLWVILEKPFVPALIAFTL 117

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            T A+  EI R  + + P+G++EAA A G++     R ++LP A R  +P   ++ + +L
Sbjct: 118 NTGAYTTEIFRGAIKSTPKGEIEAARAYGMSRALMLRRIVLPSAFRRALPAYGNEVIFML 177

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             S++A  V   DL      +  +     +  L    IYL L+  I  F   L  ++
Sbjct: 178 HASAIASVVTIMDLTGAARFVYARFYAPFDAFLFVAAIYLCLTFTIIYFFRHLEKRL 234



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 33/74 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L F  +I   ++   +  GR S +  +      Y  VFR  P LV ++ +Y  
Sbjct: 29  GLVTTVQLVFLSLIIGLVLAVPLAIGRGSKHAWIRLPIFFYCYVFRGTPLLVQLYLIYYG 88

Query: 152 VLSVLPIPDHSIVL 165
           V+ V  I D  + +
Sbjct: 89  VVFVEGIQDTWLWV 102


>gi|315638191|ref|ZP_07893373.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter upsaliensis JV21]
 gi|315481727|gb|EFU72349.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter upsaliensis JV21]
          Length = 250

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 18/237 (7%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
             P         +      +     T+  +    + + V G +  + A            
Sbjct: 26  ISPFALWKFLDTLEQTQTFMDGFIYTLQVSVLALLIAVVFGTIGGVMA-----TSKIAVL 80

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A   +Y+  F         L+   + L++  P L              F    + +  Y
Sbjct: 81  RAYTRIYVEIFQNTP-----LVIQIFFLYYGLPHL--------GINLDLFTIGVLGIGAY 127

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++E+VRSG++AVP+GQ EA+ + G T+ +  R +++PQ ++ I+PP+++Q +NL+K
Sbjct: 128 HGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIIVPQTIKIILPPMSNQMINLIK 187

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           N+S+ + VG  +L+S   +     G      +   F+Y  +   +A F      K+ 
Sbjct: 188 NTSVLLIVGGVELMSTADSYAADYGNYAPAYIFAAFLYFIVCYPLAYFAKFYEEKLK 244



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 42/88 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               + GF+ T  ++   ++ A + GT+ G    S   ++    R+YVE+F+N P ++ I
Sbjct: 41  TQTFMDGFIYTLQVSVLALLIAVVFGTIGGVMATSKIAVLRAYTRIYVEIFQNTPLVIQI 100

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           FFLY  +  +    D   +   G+   +
Sbjct: 101 FFLYYGLPHLGINLDLFTIGVLGIGAYH 128


>gi|312866307|ref|ZP_07726525.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098001|gb|EFQ56227.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 302

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 52/254 (20%), Positives = 106/254 (41%), Gaps = 5/254 (1%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V  +L KS L    +        F +      +      +     + ++  + G++L+L 
Sbjct: 39  VWGYLVKSGLYNDFVKTLPDGRLFSLQAVFSAIPDILKHLPMTLGLTIWGSIFGLILALL 98

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGST 261
              + +         +   ++S   + G P LV + L Y       + +  +FN      
Sbjct: 99  -FAIVKINRVPVLYQIQAFFVSF--LRGTPILVQLMLTYYGIPLLLRYLNMKFNTGWNIN 155

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                +   +A +   AA+ +E +R+ + AV  G++EAA +LG+T+ +  R V++P A  
Sbjct: 156 NISPIVFAVVAFALNEAAYTSETIRAAIQAVDAGEIEAAKSLGMTNAQIYRRVIIPNAAV 215

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              P L +  ++L K +SLA + G  ++ +    I  +  +  E  +    IY  +SI+I
Sbjct: 216 IATPTLINTLISLTKGTSLAFSAGIIEMFAQAKIIGGRDYRYFERYISVAIIYWIVSIVI 275

Query: 382 ALFMNRLNAKIALK 395
                 +   + +K
Sbjct: 276 ENIGRYIEKSMEIK 289


>gi|291486571|dbj|BAI87646.1| hypothetical protein BSNT_06059 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 224

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 15/201 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L                L  LYIS F   G+PTLV + L Y   +  P L     
Sbjct: 38  GLILALITKN-----KIPVLHQLSKLYISFF--RGVPTLVQLFLIY---YGLPQL----- 82

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
               +      +  I LS   AA++AEI R+ L +V  GQ+EA +++G+T  +A R ++L
Sbjct: 83  FPEMSKMTALTAAIIGLSLKNAAYLAEIFRAALNSVDDGQLEACLSVGMTKFQAYRRIIL 142

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+ IP   + ++ LLK +SLA  +G  ++ + G    +   +  E  L    +Y  
Sbjct: 143 PQAIRNAIPATGNTFIGLLKETSLAFTLGVMEMFAQGKMYASGNLKYFETYLAVAIVYWI 202

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           L+++ ++  +     ++   +
Sbjct: 203 LTMIYSMLQDLFERAMSKPYR 223


>gi|148545554|ref|YP_001265656.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|167031322|ref|YP_001666553.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|148509612|gb|ABQ76472.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|166857810|gb|ABY96217.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|313496644|gb|ADR58010.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 230

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 3/188 (1%)

Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++  F   L+ G+P L+ + L Y                       F +  
Sbjct: 41  KTSPLKPLQWLGGFYSTLVRGVPELLWVLLIYFGTVGLMNSLGEALNMPGLELSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T +     ++   IYL L+++    M+ +  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLTVLAMTGMHFMEK 220

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 221 RAARGFAR 228


>gi|296119654|ref|ZP_06838212.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Corynebacterium ammoniagenes DSM 20306]
 gi|295967537|gb|EFG80804.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Corynebacterium ammoniagenes DSM 20306]
          Length = 305

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 113/259 (43%), Gaps = 6/259 (2%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
             F +   +L+   I   +    +G       L    + +       I + + ++G+V  
Sbjct: 18  WTFAVIILLLAAWFIIGAARNEAYGWDTYFAYLLDTRIAIASLHTLAITLLAMIIGVVGG 77

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQLHFDKPVLGQFNFIGGS 260
                L R       +++  +++  F    +   LV   L   L+    +      + G 
Sbjct: 78  AILAVL-RMSPNPVLRSVSWIFLWVFRGTPIYVQLVFWGLLGALYQSINLGFAEISLEGV 136

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
             S  F+S  + L    AA++AEIVRSG+ +VP GQ EA+ ALG+      R  ++PQAM
Sbjct: 137 LSSAFFLS-VVGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVMPQAM 195

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           R IIPP  +++++LLK SSL VA+ +  ++      I     + I ++++    YL ++ 
Sbjct: 196 RIIIPPTGNEFISLLKTSSLVVAIPYTHEIFGRATDISAALFEPIPLLMVAATWYLVITS 255

Query: 380 MIALFMNRLNAKIALKEKK 398
           +  +  + L         +
Sbjct: 256 IFMVGQHYLEKYYEKGATR 274



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 21/117 (17%)

Query: 33  LALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVG 92
            A+++ ++  W +     N E         +L +                      I + 
Sbjct: 20  FAVIILLLAAWFIIGAARN-EAYGWDTYFAYLLDTR--------------------IAIA 58

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            ++T  +    MI   + G ++   R+S N ++  +  +++ VFR  P  V + F  
Sbjct: 59  SLHTLAITLLAMIIGVVGGAILAVLRMSPNPVLRSVSWIFLWVFRGTPIYVQLVFWG 115


>gi|260564759|ref|ZP_05835244.1| cystine transport system permease [Brucella melitensis bv. 1 str.
           16M]
 gi|265989983|ref|ZP_06102540.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265992906|ref|ZP_06105463.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|260152402|gb|EEW87495.1| cystine transport system permease [Brucella melitensis bv. 1 str.
           16M]
 gi|262763776|gb|EEZ09808.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000652|gb|EEZ13342.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 250

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 13/255 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
              ++     +   +        ++P  + L    L              +       + 
Sbjct: 1   MHFLLCMFIPARFIIPITAKEPKLVPDWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLA 60

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               T L R F      ++   Y+  F   G P LV + + +                  
Sbjct: 61  LGLLTALVRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIG 107

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA 
Sbjct: 108 VYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQAT 167

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +PPL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +
Sbjct: 168 RTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSI 227

Query: 381 IALFMNRLNAKIALK 395
           ++    RL  +    
Sbjct: 228 LSALQVRLERRFGRY 242


>gi|26987023|ref|NP_742448.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24981642|gb|AAN65912.1|AE016219_5 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 230

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 3/188 (1%)

Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++  F   L+ G+P L+ + L Y                       F +  
Sbjct: 41  KTSPFKPLQWLGGFYSTLVRGVPELLWVLLIYFGTVGLMNSLGEALNMPGLELSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T +     ++   IYL L+++    M+ +  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHSQIGVTVTKEPFTFYMVAACIYLGLTVLAMTGMHFMEK 220

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 221 RAARGFAR 228


>gi|152969396|ref|YP_001334505.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206580885|ref|YP_002239549.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|238893864|ref|YP_002918598.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|288936394|ref|YP_003440453.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510551|ref|ZP_06549921.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55]
 gi|330010080|ref|ZP_08306679.1| glutamine ABC transporter permease protein [Klebsiella sp. MS 92-3]
 gi|150954245|gb|ABR76275.1| glutamine ABC transporter permease component [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206569943|gb|ACI11719.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|238546180|dbj|BAH62531.1| glutamine ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891103|gb|ADC59421.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777267|gb|EFD85265.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55]
 gi|328534631|gb|EGF61205.1| glutamine ABC transporter permease protein [Klebsiella sp. MS 92-3]
          Length = 219

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+++ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPILLEGAKMTLWISVLGLAGGLIIGLVAG-FARCFGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAF------SDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFILRRLERRMKI 218


>gi|237798794|ref|ZP_04587255.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331021647|gb|EGI01704.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 242

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S  L IVL L     ++       +    +Y  T LI G+P LVL+ L + 
Sbjct: 28  WMTIKLAVLSLALSIVLGLIG-ATAKLSSSALLRIPAQIY--TTLIRGVPDLVLMLLIFY 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +              F +  I L     A+  E  R  +++VPRGQ+EAA A 
Sbjct: 85  SLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVPRGQVEAATAY 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V+ PQ MR  +P + + +  LLK ++L   +G ADLV         T Q 
Sbjct: 145 GLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKASQDAGKSTYQL 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++   IYL ++    L +       A   ++
Sbjct: 205 FYFLILAALIYLMITSASNLALRWAERHYAAGSRE 239



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 41/83 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +    +LS++ L+    ++Y  + R +P LV+
Sbjct: 19  FGPLLLEGTWMTIKLAVLSLALSIVLGLIGATAKLSSSALLRIPAQIYTTLIRGVPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 79  MLLIFYSLQTWLTMLTDAMEWEY 101


>gi|66047136|ref|YP_236977.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257843|gb|AAY38939.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 248

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +      R    +    +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALILGSVLGVM-----RTVPNRLVSGIAAVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRAIEKKVAV 239



 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   N+LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPNRLVSGIAAVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|226940536|ref|YP_002795610.1| amino acid ABC transporter, permease protein [Laribacter
           hongkongensis HLHK9]
 gi|226715463|gb|ACO74601.1| probable amino acid ABC transporter, permease protein [Laribacter
           hongkongensis HLHK9]
          Length = 219

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 14/232 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                L    L              + S  LG++L  FA  L R         L  LY+S
Sbjct: 1   MNWTELWALALPVMLQGAWHTLLFAISSMALGLLLG-FAIALVRLTRLPVLAPLAALYVS 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV I + Y               G         +  +AL+   AA+++E +
Sbjct: 60  A--MRGTPLLVQIFVIYY-----------GLPGIGIEFDPVTAGILALTMNAAAYLSESM 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  +  V  GQ +AA +LG +  ++ R ++ PQA+R  +P L++  ++L+K++SL   + 
Sbjct: 107 RGAIAGVSTGQWQAASSLGFSWWQSMRFIIAPQALRLAVPSLSNTLISLIKDTSLVSVIT 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++L+     II QT Q + + L    IY  +S+       R+  ++    +
Sbjct: 167 VSELMLATKEIIAQTYQPLPLYLAAAGIYWLMSLAFEQVQKRVENRLETAHQ 218



 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 36/85 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G  +T   A S M    ++G  +   RL+   ++A +  +YV   R  P LV IF 
Sbjct: 13  VMLQGAWHTLLFAISSMALGLLLGFAIALVRLTRLPVLAPLAALYVSAMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D        + +N
Sbjct: 73  IYYGLPGIGIEFDPVTAGILALTMN 97


>gi|120597747|ref|YP_962321.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           sp. W3-18-1]
 gi|120557840|gb|ABM23767.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sp. W3-18-1]
 gi|319427459|gb|ADV55533.1| ABC arginine transporter, inner membrane subunit, ArtQ [Shewanella
           putrefaciens 200]
          Length = 226

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG VL +  T   +   +   +    LY+   +I G P +V + + Y +
Sbjct: 30  VTLVVTFFAMLLGAVLGIGTT-FMKMSSKWYIRFPANLYVG--VIRGTPVVVQLVILYFI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +  +    +  +  IA    + A+I+EI+R+G+ AV +GQ EAA +LG
Sbjct: 87  ------------VLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     + ++LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +  
Sbjct: 135 LSQAMTMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDS 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +     IYL L+      +++   ++   +
Sbjct: 195 VPLFTCALIYLFLTYSFTFVLSKFEKRLKQSD 226



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  M+   ++G      ++S+   + +   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLVVTFFAMLLGAVLGIGTTFMKMSSKWYIRFPANLYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VLS 
Sbjct: 84  YFIVLSA 90


>gi|324324461|gb|ADY19721.1| amino acid ABC transporter, permease protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 230

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AVIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSLPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLETYIIVGLYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|157369897|ref|YP_001477886.1| arginine transporter permease subunit ArtQ [Serratia proteamaculans
           568]
 gi|157321661|gb|ABV40758.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 246

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRL--SRH--------FHEKTGKALPLLYISTFLIFGLPT 234
               + V + +LG++L++       SR               + LP + +  F+ FG   
Sbjct: 21  MTVGLAVCALILGLILAMLFAVWESSRWKVVSWLGTAWVTLLRGLPEILVVLFIYFGSSQ 80

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L+    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 81  LLLMLSDGFTLNLGLFQLPIQLAIDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 139

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALG++       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 140 QGQWESGQALGMSTAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 199

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    + R+  +    E+
Sbjct: 200 KSIATRTQEPFTWYVIAAAIYLVVTLISQYIIKRIELRTTRFER 243


>gi|238792437|ref|ZP_04636071.1| Arginine transport system permease protein artQ [Yersinia
           intermedia ATCC 29909]
 gi|238728363|gb|EEQ19883.1| Arginine transport system permease protein artQ [Yersinia
           intermedia ATCC 29909]
          Length = 238

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLI 238
                     VL ++ ++  +   +             + LP + +  F+ FG   L+++
Sbjct: 17  LAVCALALGLVLAMLFAVCESSRVKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQLLMM 76

Query: 239 AL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
               + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ 
Sbjct: 77  LSDGFTLNLYLFELPIKLNIDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I 
Sbjct: 136 ESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 196 TRTQEPFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|238786386|ref|ZP_04630316.1| Arginine transport system permease protein artQ [Yersinia
           bercovieri ATCC 43970]
 gi|238712713|gb|EEQ04795.1| Arginine transport system permease protein artQ [Yersinia
           bercovieri ATCC 43970]
          Length = 238

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++       +RL    +  TG     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNIDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 IGQWESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYMIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|119387647|ref|YP_918681.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378222|gb|ABL72985.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 214

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            L    +          A + + +FVLG  + L    + R    +  + +   YI   ++
Sbjct: 1   MLTTFQMQALLTAAVWTAGLSLIAFVLGGAVGLLI-AVMRVSANRVLRGIAFTYIQ--IV 57

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV++ L +           F           F +   A+  Y++A+  EI R G+
Sbjct: 58  QGTPLLVMMMLAF-----------FGLSILGFDLTPFAAASFAMVIYSSAYFGEIWRGGI 106

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVP+ Q EAA  L L   +   LV++PQ +R   PP     + ++KN+SLA  +G A+L
Sbjct: 107 LAVPKTQWEAAECLALHPVQRFWLVIIPQGLRISTPPTVGFMVQIVKNTSLASVIGVAEL 166

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I N T Q   I  +   +Y  +   +A +  +L  K+ +  +
Sbjct: 167 TYTSKLINNSTFQPFIIFSVVAVLYFCMCYPLAWWSRKLEDKLNVAHR 214



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 39/102 (38%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L   V T  L+    +    +G L+   R+SAN+++  I   Y+++ +  P LV++
Sbjct: 7   MQALLTAAVWTAGLSLIAFVLGGAVGLLIAVMRVSANRVLRGIAFTYIQIVQGTPLLVMM 66

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              +  +  +           F M + +             A
Sbjct: 67  MLAFFGLSILGFDLTPFAAASFAMVIYSSAYFGEIWRGGILA 108


>gi|330877359|gb|EGH11508.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 248

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      +V + +LG VL +  T  SR         +   Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWVIALILGSVLGVMRTVPSRL-----VSGIATAYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPADLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    + A I+G+++G  R   ++LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWVIALILGSVLGVMRTVPSRLVSGIATAYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPADLQEWYKQD 103


>gi|320177859|gb|EFW52845.1| Glutamate transport membrane-spanning protein [Shigella boydii ATCC
           9905]
          Length = 219

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--MIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++E+ R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEMIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|42522400|ref|NP_967780.1| polar amino acid transport system permease protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39574932|emb|CAE78773.1| polar amino acid transport system permease protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 247

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 14/241 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------------TRLSRHFHE 213
            F   +           + T  ++ +     G +L LF              R   H   
Sbjct: 4   WFRTDIIIEYWPLFMQGLATTLQLTLIGIFFGTILGLFLGLGKIARIERGPWRWPTHLFV 63

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYI 271
           +    + + +     +F    L+  AL   L    D  ++     +         +S  +
Sbjct: 64  RLPSQIYIGFFRGTPLFVQILLIHFALVPLLIHPEDGLLISGDMALYLKREYGALISGAL 123

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS  +AA+IAEI R+G+ ++ RGQ EAA +LGL++    + +++PQA R ++PPL ++ 
Sbjct: 124 ALSLNSAAYIAEIFRAGIQSIDRGQFEAARSLGLSYFHTMKSIIIPQAFRRMLPPLGNEA 183

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + LLK+SSL  A+G A+L     T      +  E  L    IYL +++ ++  ++RL  +
Sbjct: 184 ITLLKDSSLVSAIGLAELAYAARTAAGAYARYWEPYLFISLIYLIITLGMSFVVHRLEKR 243

Query: 392 I 392
            
Sbjct: 244 Y 244



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 10/127 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVE 134
           Y    + G   T  L   G+   TI+G  +G G+++           +  V    ++Y+ 
Sbjct: 13  YWPLFMQGLATTLQLTLIGIFFGTILGLFLGLGKIARIERGPWRWPTHLFVRLPSQIYIG 72

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR  P  V I  ++ +++ +L  P+  +++   M L  +      ++      +   ++
Sbjct: 73  FFRGTPLFVQILLIHFALVPLLIHPEDGLLISGDMALYLKREYGALISGALALSLNSAAY 132

Query: 195 VLGIVLS 201
           +  I  +
Sbjct: 133 IAEIFRA 139


>gi|115351108|ref|YP_772947.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115281096|gb|ABI86613.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 253

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 35  WAGTVQTIELSVLSLAAAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 91

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 92  LLFYSIQIWLNQFTDLVGWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 151

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 152 GAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 211

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      ILI   IYL+++ +  L + +L  + ++  + 
Sbjct: 212 TFNMFFFILIAALIYLAITTVSNLVLIQLEKRYSMGVRH 250



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 30  FGPVLWAGTVQTIELSVLSLAAAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 89

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 90  MLLLFYSI 97


>gi|57237748|ref|YP_178996.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni RM1221]
 gi|86150652|ref|ZP_01068874.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151089|ref|ZP_01069305.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86152546|ref|ZP_01070751.1| amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|121612211|ref|YP_001000594.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157415177|ref|YP_001482433.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005525|ref|ZP_02271283.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205356403|ref|ZP_03223168.1| putative ABC type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562539|ref|YP_002344318.1| putative ABC-type amino-acid transporter permease [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283956263|ref|ZP_06373743.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315124413|ref|YP_004066417.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|57166552|gb|AAW35331.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni RM1221]
 gi|85838913|gb|EAQ56180.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85842259|gb|EAQ59505.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85843431|gb|EAQ60641.1| amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|87248890|gb|EAQ71853.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|112360245|emb|CAL35040.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|157386141|gb|ABV52456.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|205345788|gb|EDZ32426.1| putative ABC type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|283791983|gb|EFC30772.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284926153|gb|ADC28505.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|307747818|gb|ADN91088.1| Amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315018135|gb|ADT66228.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315058359|gb|ADT72688.1| Putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni S3]
 gi|315927530|gb|EFV06863.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315930760|gb|EFV09765.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
 gi|315932599|gb|EFV11530.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 250

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 18/252 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L  I   +         P         +   +  ++    T++ +    + + + G +  
Sbjct: 11  LRQILTSWGLYDENSISPFAVWKFLDALDNKDAFINGFIYTLEVSILALLIATIFGTIGG 70

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           + A         K  +A   +Y+  F         L+   + L +  PVL          
Sbjct: 71  VMA-----TSRFKIIRAYTRIYVELFQNVP-----LVIQIFFLFYALPVL--------GI 112

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F    + +  Y  A+++E+VRSG++AVPRGQ EA+ + G T+ +  R +++PQ +R
Sbjct: 113 RLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIR 172

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP+T+Q +NL+KN+S+ + VG A+L+    +     G      +    +Y  +   +
Sbjct: 173 IILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYAPAYIFAAVLYFIICYPL 232

Query: 382 ALFMNRLNAKIA 393
           A F      K+ 
Sbjct: 233 AYFAKAYENKLK 244



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 47/87 (54%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A + GF+ T  ++   ++ ATI GT+ G    S  K++    R+YVE+F+N+P ++ IF
Sbjct: 42  DAFINGFIYTLEVSILALLIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIF 101

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           FL+ ++  +    D   +   G+   +
Sbjct: 102 FLFYALPVLGIRLDIFTIGVLGVGAYH 128


>gi|260102750|ref|ZP_05752987.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260083443|gb|EEW67563.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
          Length = 213

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+  +    +FS +LG+  +L           K GK +  +YI+ F    
Sbjct: 9   WGSFLTGFWNTILCSIIALIFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ + Y +                     F +  I L+ YT+AFIAE VR+G+ +
Sbjct: 62  IPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGISS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 ISTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I   T + I+  ++    YL L++ ++ +M  L  K+A
Sbjct: 171 QAQLIAFSTFRTIDTYVVVGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + L GF NT   +   +I + I+G       ++  K    + +VY+ +FRNIP LV++
Sbjct: 9   WGSFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
              Y  V   +           G+ L     
Sbjct: 69  MIFYLIVPRYIVKLSGFQAGTIGLTLYTSAF 99


>gi|255656163|ref|ZP_05401572.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
          Length = 223

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 15/228 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + + + L    +    +T+       VFS ++G +++L     S ++  K    +  +
Sbjct: 3   FNMKYFLELFPIIMKSFNVTVILAISSLVFSLIIGTIVAL-----SSYYKVKVLNQICKV 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G P +  +   + L+F    +  F             +  I LS    A+++
Sbjct: 58  YVSIF--RGTPLMPQL---FFLYFGLAYMSDF-----VKNMDPVFATSIVLSLNMGAYMS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ ++++ +GQ+EAA A+GLT+ +  + +++PQA+R  +P L + +++L+K SS+A 
Sbjct: 108 ETIRASILSIDKGQIEAAYAMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            VG  D++    +    + +  E+    M IY  +   +     ++  
Sbjct: 168 VVGVNDIMGAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGTKKIRK 215



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 YKSV 152
           Y  +
Sbjct: 75  YFGL 78


>gi|315640805|ref|ZP_07895905.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483417|gb|EFU73913.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 215

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 18/221 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +     T+  +    + S ++G ++++      +       + L   Y+  F    L  
Sbjct: 12  FIDGFKYTILASFIALIASLIIGTLMAIL-----QLSKNNVIRRLAKAYVEFFRNVPLLI 66

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V+I       +  P                F +  I L+ YT+AFIAE VRSG+  V  
Sbjct: 67  IVMIFYVVIPLYLVPF-------------DGFQAGTIGLTIYTSAFIAETVRSGIQTVHS 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA ++ G T+ +  R ++LPQA + +IPPL  Q++NL+KNSS+   V   D++  G 
Sbjct: 114 GQMEAGLSSGFTYWQTMRYIVLPQAFKIVIPPLGGQFINLIKNSSILAMVAGLDIMYQGD 173

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            I + T    +  +I    YL L++ ++ +M+ L  K A++
Sbjct: 174 LIASTTFNTFDTYIIVGIFYLILTLPLSYYMSYLEKKWAVR 214



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 42/88 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GF  T   +F  +I + IIGTL+   +LS N ++  + + YVE FRN+P L+++   
Sbjct: 12  FIDGFKYTILASFIALIASLIIGTLMAILQLSKNNVIRRLAKAYVEFFRNVPLLIIVMIF 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  +   L   D       G+ +     
Sbjct: 72  YVVIPLYLVPFDGFQAGTIGLTIYTSAF 99


>gi|242237676|ref|YP_002985857.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242129733|gb|ACS84035.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 223

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 11/223 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                + + T A + + S    IVL L    L R         L  LYIS F   G+P+L
Sbjct: 12  FPQVLMYLPTTALLAIVSMAFAIVLGLIL-ALIRESRLLVVAKLVELYISLF--RGIPSL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y   F  P L                +  I  S   +A++AEI R+ L +V  G
Sbjct: 69  VQLFIIY---FGLPQL-----FPALNGLSAMAAAIIGFSLKNSAYMAEIFRAALASVDFG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+G ++L + G  
Sbjct: 121 QTEAGLSVGMSRVQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAFALGVSELFAEGKM 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I  ++ +  E  L+   IY  + I  + F  RL  K++   ++
Sbjct: 181 IAAESLRFFETFLVVGLIYWLVIIAYSWFQTRLEKKLSHSRQR 223



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  LA   M  A ++G ++   R S   +VA +  +Y+ +FR IP LV +F +Y  +
Sbjct: 19  LPTTALLAIVSMAFAIVLGLILALIRESRLLVVAKLVELYISLFRGIPSLVQLFIIYFGL 78

Query: 153 LSVLP 157
             + P
Sbjct: 79  PQLFP 83


>gi|167038159|ref|YP_001665737.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|320116568|ref|YP_004186727.1| polar amino acid ABC transporter inner membrane subunit
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166856993|gb|ABY95401.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319929659|gb|ADV80344.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 220

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 14/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+   +  +G++L L    L +    K    +   Y+   +I G P LV + L Y  
Sbjct: 21  MTLKLTFLAVTIGVILGLIV-ALIKMSSIKPISFIGASYVE--IIRGTPLLVQLLLIYN- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L QF         P F +   AL+  +AA++AEI+R+G+ AV  GQ EAA +LG
Sbjct: 77  -----GLMQFG-----IDIPAFTAGVSALAINSAAYVAEIIRAGIQAVDPGQNEAARSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +TH  A R V++PQA+++I+P L ++++ +LK S++   +GFADL      I + T +  
Sbjct: 127 MTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIISVIGFADLTRQADIIQSITYKYF 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +I   IY  ++ + +  +     ++   + +
Sbjct: 187 EPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR 220



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 39/86 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + S   Y+   + G + T  L F  +    I+G +V   ++S+ K +++I   YVE+ 
Sbjct: 3   INFLSMLKYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVEII 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHS 162
           R  P LV +  +Y  ++         
Sbjct: 63  RGTPLLVQLLLIYNGLMQFGIDIPAF 88


>gi|121608572|ref|YP_996379.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553212|gb|ABM57361.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 260

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 71/211 (33%), Positives = 107/211 (50%), Gaps = 12/211 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S  LG+VL    T L+R       + +   YI  ++I G P LV I   Y   F
Sbjct: 60  LWLTLVSGSLGLVLGT-GTALARTSRWMVLRWVAGFYI--WVIRGTPLLVQILFVY---F 113

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L            P+F +  +AL     A+ AE VR+GL+AVPRGQ EAA ALGL 
Sbjct: 114 ALPILVP------GLNLPDFAAAVLALGLNVGAYNAEAVRAGLLAVPRGQTEAAKALGLG 167

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                  V+ PQA R  +PPL + ++ LLK+SSLA A+G  +L +VG  I + T Q++  
Sbjct: 168 RLHVIADVVFPQAFRIALPPLVNNFVALLKDSSLAYAIGVVELTNVGYRIQSVTFQSVAT 227

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +      YL L+ ++    N +  +  ++ +
Sbjct: 228 LSTVAVTYLLLTTLLTQISNSVEYRFDVEGR 258



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 33/78 (42%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               S A A   G   T WL         ++GT     R S   ++ W+   Y+ V R  
Sbjct: 43  EPIGSNAQAFSAGARITLWLTLVSGSLGLVLGTGTALARTSRWMVLRWVAGFYIWVIRGT 102

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV I F+Y ++  ++P
Sbjct: 103 PLLVQILFVYFALPILVP 120


>gi|328554363|gb|AEB24855.1| GlnM [Bacillus amyloliquefaciens TA208]
 gi|328912767|gb|AEB64363.1| putative glutamine transport system permease protein [Bacillus
           amyloliquefaciens LL3]
          Length = 216

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 10/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N   L              + +  + +  S     L      +     P+ +I T  + 
Sbjct: 1   MNFSILMENFDMYMDGFLHTLLASFIALAGSFALGVLIAV--MRITAFKPIQWIGTAYVE 58

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  + L+ + +  +F  P                F +  IAL+ YT+AFIAE +R+G+ 
Sbjct: 59  FIRNIPLLLITFVFYFGLP--------NAGLRLDGFQAGTIALTIYTSAFIAEAIRAGIQ 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V +GQMEAA + G T+ +A R V+LPQA++ +IPPL +Q+LNL+KNSS+   V   DL+
Sbjct: 111 TVSKGQMEAARSSGFTYSQAMRYVILPQAVKIVIPPLGNQFLNLVKNSSILGVVAGLDLM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                + + T    ++ +     YL L+I +++ ++ L  ++   
Sbjct: 171 YQADLVSSSTLVVFDVYIFVALFYLMLTIPLSIGVHYLERRLGKS 215



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF++T   +F  +  +  +G L+   R++A K + WI   YVE  RNIP L++ F  Y  
Sbjct: 16  GFLHTLLASFIALAGSFALGVLIAVMRITAFKPIQWIGTAYVEFIRNIPLLLITFVFYFG 75

Query: 152 VLSV 155
           + + 
Sbjct: 76  LPNA 79


>gi|57242094|ref|ZP_00370034.1| amino acid ABC transporter, permease protein [Campylobacter
           upsaliensis RM3195]
 gi|57017286|gb|EAL54067.1| amino acid ABC transporter, permease protein [Campylobacter
           upsaliensis RM3195]
          Length = 250

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 102/237 (43%), Gaps = 18/237 (7%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
             P         +      +     T+  +    + + V G +  + A            
Sbjct: 26  ISPFALWKFLDTLEQTQTFMDGFIYTLQVSVLALLIAVVFGTIGGVMA-----TSKIAVL 80

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A   +Y+  F         L+   + L++  P L              F+   + +  Y
Sbjct: 81  RAYTRIYVEIFQNTP-----LVIQIFFLYYGLPHL--------GINLDLFVIGVLGIGAY 127

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++E+VRSG++AVP+GQ EA+ + G T+ +  R +++PQ ++ I+PP+++Q +NL+K
Sbjct: 128 HGAYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIIVPQTIKIILPPMSNQMINLIK 187

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           N+S+ + VG  +L+S   +     G      +   F+Y  +   +A F      K+ 
Sbjct: 188 NTSVLLIVGGVELMSTADSYAADYGNYAPAYIFAAFLYFIVCYPLAYFAKFYEEKLK 244



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 43/88 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               + GF+ T  ++   ++ A + GT+ G    S   ++    R+YVE+F+N P ++ I
Sbjct: 41  TQTFMDGFIYTLQVSVLALLIAVVFGTIGGVMATSKIAVLRAYTRIYVEIFQNTPLVIQI 100

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           FFLY  +  +    D  ++   G+   +
Sbjct: 101 FFLYYGLPHLGINLDLFVIGVLGIGAYH 128


>gi|296110805|ref|YP_003621186.1| amino acid ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832336|gb|ADG40217.1| amino acid ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 237

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 14/225 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLLYISTFLIFGL 232
           L+    T+  +   F+F  ++  +++L      R              +L    +L    
Sbjct: 14  LAGLQYTVTLSILSFIFGLIIATIVALLRREQPRQQGMTYILWRITNSVLRFYVWLFRST 73

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + +                       F +  I  S    A+ +E VR+ L +V
Sbjct: 74  PLLVQLFIIFY-----------GLPSAGIQIGAFPAAVITFSLNVGAYASETVRAALDSV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q EAA  LGL+ R+    ++ PQA+R  +PPL+++++ L+K++SLA  +   ++ ++
Sbjct: 123 PQAQWEAAATLGLSRRQTIFEIIFPQAIRIALPPLSNEFIGLVKDTSLASTITIVEMFAI 182

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              I  +  Q + +  I   IY   S ++      L  + +   K
Sbjct: 183 TQQITAKNYQPLLMYSIVAVIYAFFSTILVFLQKYLEKRTSRYLK 227


>gi|184156274|ref|YP_001844614.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|227514071|ref|ZP_03944120.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus fermentum ATCC
           14931]
 gi|183227618|dbj|BAG28134.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|227087552|gb|EEI22864.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus fermentum ATCC
           14931]
          Length = 229

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 103/220 (46%), Gaps = 10/220 (4%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +     I + SFV+G+V+++     R+S+   +       +  + +F ++   + 
Sbjct: 12  IFWAGIKYTIPIAIISFVIGLVIAVITALIRISKPHGKSKAVWAVVRAVFSFYVWLFRST 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+   + + F  P +              + +  I  S  T A+ +E +R  L+++P  
Sbjct: 72  PLLVQLFIVFFGLPNV--------GIQFNAWTAGIITFSLNTGAYASETIRGALLSIPDS 123

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q +AA ++G+T+R+    ++ PQA+R  +PPL++ ++ L+K++SLA ++   ++  V   
Sbjct: 124 QWDAAYSIGMTYRQVLFRIVFPQALRVALPPLSNSFIGLVKDTSLASSITIVEMFMVSQQ 183

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I +   Q + +  I   IY     ++++  + L    +  
Sbjct: 184 IASNNYQPLLMYSIVAAIYALFCTVLSILQHYLEKWTSRY 223



 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 8/82 (9%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN--------KLVAWICRVYVEVFRNIP 140
              G   T  +A    +   +I  +    R+S           +V  +   YV +FR+ P
Sbjct: 13  FWAGIKYTIPIAIISFVIGLVIAVITALIRISKPHGKSKAVWAVVRAVFSFYVWLFRSTP 72

Query: 141 PLVVIFFLYKSVLSVLPIPDHS 162
            LV +F ++  + +V    +  
Sbjct: 73  LLVQLFIVFFGLPNVGIQFNAW 94


>gi|262047082|ref|ZP_06020041.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|312984302|ref|ZP_07791646.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus CTV-05]
 gi|260572659|gb|EEX29220.1| glutamine ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|310894320|gb|EFQ43398.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus crispatus CTV-05]
          Length = 213

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 71/221 (32%), Positives = 116/221 (52%), Gaps = 18/221 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+ ++    VFS +LG++ +L     S     K G+ +  +YI+ F    
Sbjct: 9   WGSFLTGFWNTILSSIIALVFSLILGVIFALLEVAPS-----KFGQVIAKIYIAIF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ + Y +                     F +  I L+ YT+AFIAE VR+G+ +
Sbjct: 62  IPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 IGTGQMEGARSNGMTYVQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               I   T Q I+  +I    YL L++ ++ +M  L  K+
Sbjct: 171 QAQLIAFSTFQTIDTYIIVGLFYLILTLPLSYYMRHLEKKL 211



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + L GF NT   +   ++ + I+G +     ++ +K    I ++Y+ +FRNIP LV++
Sbjct: 9   WGSFLTGFWNTILSSIIALVFSLILGVIFALLEVAPSKFGQVIAKIYIAIFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
              Y  V   +           G+ L        T+    N+   
Sbjct: 69  MIFYLIVPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGINSIGT 113


>gi|238795812|ref|ZP_04639325.1| Arginine transport system permease protein artQ [Yersinia
           mollaretii ATCC 43969]
 gi|238720275|gb|EEQ12078.1| Arginine transport system permease protein artQ [Yersinia
           mollaretii ATCC 43969]
          Length = 238

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++       +RL    +  TG     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLVLAMLFAVCESSRLKVVSYLTTGWVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNIDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 IGQWESGQALGLSQAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|294635975|ref|ZP_06714417.1| L-cystine ABC transporter, permease protein [Edwardsiella tarda
           ATCC 23685]
 gi|291090704|gb|EFE23265.1| L-cystine ABC transporter, permease protein [Edwardsiella tarda
           ATCC 23685]
          Length = 232

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 13/189 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R +     +     Y+  ++I G P LV + L +                       F 
Sbjct: 57  IRLYGVWPLRVCADFYV--WVIRGTPLLVQLFLIFY-----------GLPSAGITLDAFP 103

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R  +++VPRGQ EAA A+G++  +  R V+LPQ++   +PPL
Sbjct: 104 AALIGFTLNVGAYSSEIMRGAILSVPRGQWEAASAIGMSSSQTLRRVILPQSVFVSLPPL 163

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++LLK++SLA  +   ++      I+    + + I      IYL+ S ++     R
Sbjct: 164 SNSFISLLKDTSLAAVITVPEMFLAAQRIVAVNYEPLIIYSETALIYLAFSTLLGKLQLR 223

Query: 388 LNAKIALKE 396
           L       E
Sbjct: 224 LERYYRRYE 232


>gi|170748675|ref|YP_001754935.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170655197|gb|ACB24252.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 230

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 104/230 (45%), Gaps = 2/230 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-F 227
           M  N       +       +  VF+  L  + ++    +           +P L+     
Sbjct: 1   MLSNFDFSVIVSSLPYLFGQGMVFTVTLTAMAAVGGVIIGTLLAMARLSGIPGLWHLAKG 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVR 286
            +    +L L+ + +  +F  P +G +     + +    F S  I    + AA+ +EI+R
Sbjct: 61  YVELCRSLPLVLVIFWFYFLVPYIGAYLTGSTTPIQVGAFPSALITFMAFEAAYFSEIMR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++P+GQ  AA ALG+ + +    V+LPQA R+++P L +Q + L +++SL   +  
Sbjct: 121 AGIQSIPKGQTAAAQALGMNYWQTMGNVILPQAFRNMLPLLLTQTIILFQDTSLVYVLSL 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D +     +  + G+ +E+ +    +Y ++    +  + RL  ++A+  
Sbjct: 181 TDFMGAASKVAQRDGRLVEMYVFAAVVYFAICFSASYLVRRLQRRVAIIR 230



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G V T  L     +   IIGTL+   RLS    +  + + YVE+ R++P ++VIF+ 
Sbjct: 18  FGQGMVFTVTLTAMAAVGGVIIGTLLAMARLSGIPGLWHLAKGYVELCRSLPLVLVIFWF 77

Query: 149 YKSVL 153
           Y  V 
Sbjct: 78  YFLVP 82


>gi|71064881|ref|YP_263608.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Psychrobacter arcticus 273-4]
 gi|71037866|gb|AAZ18174.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Psychrobacter arcticus 273-4]
          Length = 248

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 9/230 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                 +  ++     +   +  +  + V+G +  +      R    KT +A+   Y++ 
Sbjct: 17  GSELYIHWMITGLGWLLLIGSIAWAIAMVIGTIFGIM-----RTLPNKTARAIGTTYVTF 71

Query: 227 FLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F    +P LV +   + +   +  P + ++ +   S  +   +S  I L  +TAA I E 
Sbjct: 72  F--RNIPLLVQLFFWFYIAPGWLTPSIQEWWYKDLSPNTSAMLSASIGLGLFTAARIVEQ 129

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++P+GQ+ AA ALG +  +A + VLLPQA R I+PPL+S+  N  KN+S+A  V
Sbjct: 130 VRTGIESLPKGQINAAYALGFSIPQAYKEVLLPQAFRIILPPLSSELTNCFKNASVASLV 189

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L+S   TI   T  ++EI      IYL  ++ +   M  +  K+ +
Sbjct: 190 GVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMGLIERKLRV 239



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 30/83 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G      +       A +IGT+ G  R   NK    I   YV  FRNIP LV 
Sbjct: 21  YIHWMITGLGWLLLIGSIAWAIAMVIGTIFGIMRTLPNKTARAIGTTYVTFFRNIPLLVQ 80

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +FF +      L           
Sbjct: 81  LFFWFYIAPGWLTPSIQEWWYKD 103


>gi|260461828|ref|ZP_05810074.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785358|ref|YP_004144834.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032469|gb|EEW33734.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171246|gb|ADV14784.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 324

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 17/283 (6%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF-GMFLNNRG 175
           GR +   ++A I  + + +   +   V I  ++  +L +      S  L    ++ N   
Sbjct: 58  GRFAIAFVIAIIFCLNIVLIGFVSLKVQIGVVWAELLVLFLAFFKSFNLSMPFIWENLPY 117

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L                 F   I +     +LS +     G A  +    T    GLP L
Sbjct: 118 LITQGAVTTIYISAVSLIFASIIAMIAAIAKLSSN-----GFAYAIASFYTSFFRGLPLL 172

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I L Y      P LG F             S  +ALS  T A++ EI R+G+ ++ RG
Sbjct: 173 VQIYLIY---LGLPQLGIF--------INAVPSGVLALSLCTGAYMTEIFRAGIQSIDRG 221

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+ ++G       R ++LPQA+  IIPP+ + ++++LK+SSL   +G  +L  +  T
Sbjct: 222 QWEASRSMGFGFGLTMRRIILPQALPVIIPPMGNTFISMLKDSSLVSILGVWELTFLART 281

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   T Q +E+++    IY  +SI + L  +R+    A  + +
Sbjct: 282 LGQPTFQHMEMLITAAIIYWIMSICLELVQSRIERHFARSKVR 324


>gi|228477514|ref|ZP_04062150.1| L-cystine transport system permease protein TcyB [Streptococcus
           salivarius SK126]
 gi|228250949|gb|EEK10137.1| L-cystine transport system permease protein TcyB [Streptococcus
           salivarius SK126]
          Length = 217

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 14/218 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           + +    +     I + SF++G V ++      R   +   K    +YIS  ++ G+P L
Sbjct: 12  IPYVLSGLPYTLGISLLSFMVGNVFAIIL-AFMRMSQKPWLKYPARVYIS--IMRGVPML 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ + Y           F         P  +  +I  SC +AA++AEI RS + AV +G
Sbjct: 69  VVLFILY-----------FGLPYVGVQMPALLCAFIGFSCVSAAYMAEIFRSSIAAVDKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL  +   R ++LPQAMR  + PL +  ++++K+SSLA  +   D+      
Sbjct: 118 QWEAARSLGLPQKSIIRRIILPQAMRIAVAPLGNVIIDMVKSSSLAAMITVPDIFQNAKI 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I  +    + + ++   IY +LS    L    L  ++A
Sbjct: 178 IGGREYDYMSMYILIALIYWTLSFTFELLQGYLEKRLA 215



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 5/203 (2%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++    +   +   ++   R+S    + +  RVY+ + R +P LVV+F 
Sbjct: 14  YVLSGLPYTLGISLLSFMVGNVFAIILAFMRMSQKPWLKYPARVYISIMRGVPMLVVLFI 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           LY  +  V       +    G F          +   + A +    +     L L    +
Sbjct: 74  LYFGLPYVGVQMPALLCAFIG-FSCVSAAYMAEIFRSSIAAVDKGQWEAARSLGLPQKSI 132

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R         + +  +   +I     +V  +    +     +      IGG       M
Sbjct: 133 IRRIILPQAMRIAVAPLGNVII----DMVKSSSLAAMITVPDIFQNAKIIGGREYDYMSM 188

Query: 268 SLYIALSCYTAAFIAEIVRSGLI 290
            + IAL  +T +F  E+++  L 
Sbjct: 189 YILIALIYWTLSFTFELLQGYLE 211


>gi|299535149|ref|ZP_07048474.1| amino acid ABC transporter, permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298729466|gb|EFI70016.1| amino acid ABC transporter, permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 218

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 6/219 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                 L M   AK+ V  F + I++S+    L         +  PL +++   I+ +  
Sbjct: 4   YWQTMILPMLEGAKMTVLLFFIAILVSIPFGFL--LTLAVKSRIKPLAWLAHTYIYIMRG 61

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
             L+     + F  P+L     IG   V   F++  +      AA+ AEI R GL+A+ +
Sbjct: 62  TPLLLQLLLICFGLPML---PVIGEYLVLDRFVAACLGFILNYAAYFAEIFRGGLLAIDK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LGL+  + T  V+LPQ  R  +P L+++ + L+K+++L  AV   +L+    
Sbjct: 119 GQYEAAQVLGLSKWQTTTRVILPQMFRVALPALSNESVTLIKDTALLYAVAVPELLHFAQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T +N+    I    I   IYL +++++ +F   L  +  
Sbjct: 179 TAVNRDF-TITPFFIAGAIYLVMTLVLTVFFKWLEKRFK 216


>gi|59712192|ref|YP_204968.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio
           fischeri ES114]
 gi|59480293|gb|AAW86080.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio
           fischeri ES114]
          Length = 225

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   S V+G+ +++  T ++R+ +          YI  F   G P L
Sbjct: 10  FPVYLEGLWTTVWLVAVSLVIGLCIAV-PTAIARNSNNPVLWLPAWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y        + QF  +  +          +A S  T A+ AEIVR  +  +P+G
Sbjct: 67  IQLYLIYY------GMDQFFSVKDTLWEHASFCALVAFSLNTGAYTAEIVRGSINGLPQG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G+   +  + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMNQFQTYKRIILPSALRRALPAYSNEVIFMLHGSAIAGIVTLLDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  +     Y+ L+ +I     +L  ++
Sbjct: 181 VNSRYYAPFESYIAAGMFYMCLTFIIIFIFKQLETRM 217



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++    I       R S N ++      Y+  FR  P L+ ++ 
Sbjct: 12  VYLEGLWTTVWLVAVSLVIGLCIAVPTAIARNSNNPVLWLPAWAYIYFFRGTPLLIQLYL 71

Query: 148 LYKSV 152
           +Y  +
Sbjct: 72  IYYGM 76


>gi|187730568|ref|YP_001881002.1| glutamine ABC transporter permease [Shigella boydii CDC 3083-94]
 gi|301020697|ref|ZP_07184765.1| glutamine ABC transporter permease protein [Escherichia coli MS
           69-1]
 gi|187427560|gb|ACD06834.1| glutamine ABC transporter, permease protein [Shigella boydii CDC
           3083-94]
 gi|300398508|gb|EFJ82046.1| glutamine ABC transporter permease protein [Escherichia coli MS
           69-1]
          Length = 219

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R ++LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 4/210 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++                + +     ++               F   
Sbjct: 64  GTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREA 123

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L L      R+          L  +    I  +      +L   +   +        
Sbjct: 124 GLALGLSRWETIRYIILPLALRRMLPPLGNQWIISIKD---TSLFIVIGVAELTRQGQEI 180

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G+  + E  S            ++ I+R
Sbjct: 181 IAGNFRALEIWSAVAVFYLIITLVLSFILR 210


>gi|307316662|ref|ZP_07596105.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti AK83]
 gi|306897860|gb|EFN28603.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti AK83]
          Length = 221

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 12/231 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
           M  +   +     T+    KI + +  LG V++     +           +  +      
Sbjct: 1   MEWDWEFVRQIMPTLIEGLKITILATALGSVVAAVIGLVFAILRMTAPTPIARVTSFAVE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV +   + +  D                P  ++  I L  +   + AE+ R+
Sbjct: 61  FIRGTPLLVQLYFIFYVLPDI-----------GIRLPALVAGVIGLGIHYGTYAAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VPRGQ EAA A  LT R+    V+LPQA+  +IP L +  + + K + L  A+   
Sbjct: 110 GIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L++   +I N   + IE + +    +L +S++   F+  L A+ +  E++
Sbjct: 170 ELMNQAKSIANSNYRYIEPMTLVGVFFLIISLISVFFLRWLEARYSRVEER 220



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 36/90 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                ++ G   T      G + A +IG +    R++A   +A +    VE  R  P LV
Sbjct: 10  QIMPTLIEGLKITILATALGSVVAAVIGLVFAILRMTAPTPIARVTSFAVEFIRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            ++F++  +  +       +    G+ ++ 
Sbjct: 70  QLYFIFYVLPDIGIRLPALVAGVIGLGIHY 99


>gi|282849230|ref|ZP_06258615.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|282580934|gb|EFB86332.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
          Length = 218

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 16/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            +++ S   GI++++   RLS+           L+    +L+ G P ++ I   Y   + 
Sbjct: 25  IVWILSIPGGILMAML--RLSKLPLVDK-----LVDAFVYLMRGTPLMLQILFVY---YA 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P++       G+    +  +  +      AA++ EI R G+ ++ RGQ E A  LG T+
Sbjct: 75  LPIIT-----DGAIQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQ  + ++PPL ++ +NLLK++SL   +   D++ +  +I+ +    I   
Sbjct: 130 AQTMRKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD-ISAF 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+    YL  + ++    N L  + A+ E
Sbjct: 189 LVAALFYLIFTFILTNIFNYLERRFAVYE 217



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L     I +   G L+   RLS   LV  +   +V + R  P ++ I F+
Sbjct: 12  IADGLKVTVSLFCIVWILSIPGGILMAMLRLSKLPLVDKLVDAFVYLMRGTPLMLQILFV 71

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 72  YYALP 76


>gi|46580746|ref|YP_011554.1| amino acid ABC transporter permease [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450166|gb|AAS96814.1| amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234460|gb|ADP87314.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 233

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 5/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                + + L+   L +    + T  ++   S VL ++L      + R    +      +
Sbjct: 2   QYTFDWNLVLSGERLDWIVQGVITTCQLSGLSLVLAMLLGTLI-AVMRLSGVRPFVWFSV 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +   F     P LV I   Y       VL           + EF +  I+L+ YTAAFI
Sbjct: 61  AFTEFF--RNTPLLVQIFFWYFGS--DAVLPDAVNQWLYKQNFEFAAGVISLTVYTAAFI 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +RSG+ ++PR Q+EA+ A GL+  +A   V+LPQA R I+PPL SQ LNL KNSSL 
Sbjct: 117 AEEIRSGIFSIPRTQLEASRACGLSFMQAMSYVVLPQAFRIIVPPLISQALNLFKNSSLC 176

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +G  +L  +   I + T    E   +   IYL +S+M++L +N  N   
Sbjct: 177 MTIGVMELTYMARQIESYTFHGFEAFTVSTLIYLCISLMVSLLINLYNTHF 227



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 39/81 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ G + T  L+   ++ A ++GTL+   RLS  +   W    + E FRN P LV I
Sbjct: 16  LDWIVQGVITTCQLSGLSLVLAMLLGTLIAVMRLSGVRPFVWFSVAFTEFFRNTPLLVQI 75

Query: 146 FFLYKSVLSVLPIPDHSIVLP 166
           FF Y    +VLP   +  +  
Sbjct: 76  FFWYFGSDAVLPDAVNQWLYK 96


>gi|238854964|ref|ZP_04645294.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 269-3]
 gi|260664249|ref|ZP_05865102.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii SJ-7A-US]
 gi|282931675|ref|ZP_06337168.1| putative glutamine transport system permease protein GlnP
           [Lactobacillus jensenii 208-1]
 gi|313472444|ref|ZP_07812936.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus jensenii 1153]
 gi|238832754|gb|EEQ25061.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 269-3]
 gi|239530141|gb|EEQ69142.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus jensenii 1153]
 gi|260562135|gb|EEX28104.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii SJ-7A-US]
 gi|281304286|gb|EFA96395.1| putative glutamine transport system permease protein GlnP
           [Lactobacillus jensenii 208-1]
          Length = 212

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  LS   +T+  +      S VLG V ++           KT + +   YI  F    
Sbjct: 9   WSNLLSGFGVTVMISIISLCASLVLGTVFAIME-----VVPNKTVQIIAHSYIELFRNIP 63

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              L++I + + L   + +               F +  I LS YT+AFIAE +R+G+ +
Sbjct: 64  ---LLVITMIFYLIVPQYLFK----------ISGFTAGCIGLSLYTSAFIAECIRAGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQME A + G+T+ +A R V+LPQA +  IP L +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 VGEGQMEGARSNGMTYVQAMRFVILPQAFKVAIPSLGNQFINLIKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I   + Q +   L+    YL L++ ++ +M  L  KIA
Sbjct: 171 QGDVIAFSSFQTVNTYLVVGCCYLVLTLPLSYYMRYLEKKIA 212



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 35/72 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +  + +L GF  T  ++   +  + ++GT+     +  NK V  I   Y+E+FRNIP L
Sbjct: 6   QNNWSNLLSGFGVTVMISIISLCASLVLGTVFAIMEVVPNKTVQIIAHSYIELFRNIPLL 65

Query: 143 VVIFFLYKSVLS 154
           V+    Y  V  
Sbjct: 66  VITMIFYLIVPQ 77


>gi|88800986|ref|ZP_01116536.1| ABC-type arginine/histidine transport system, permease component
           [Reinekea sp. MED297]
 gi|88776253|gb|EAR07478.1| ABC-type arginine/histidine transport system, permease component
           [Reinekea sp. MED297]
          Length = 233

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 5/224 (2%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F N               ++   S ++G  L++    + R    K       +++ T++
Sbjct: 8   IFTNPDTYELYWDGAVVTVQMVFLSLLIGGALAVPL-AIMRTSKNKLINY--PVWVFTYI 64

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P LV + L Y        + Q  +   +     F    IA    TAA+  EI R  
Sbjct: 65  FRGTPLLVQLYLIYYGVALIEGIQQTFW--WAIFKEAFYPCLIAFVLNTAAYTTEIFRGA 122

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A PRG++EAA A G++  K  + ++LP A R  IP  +++ + +L  S++A  V  AD
Sbjct: 123 IEATPRGEIEAAKAYGMSWGKRMKRIILPSAFRRAIPAYSNEVVFMLHASAIASTVTIAD 182

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L++ G  I  +     +  +    +YL L+  I     ++  ++
Sbjct: 183 LLNAGRMIYARYYAPFDGFIFAALVYLCLTFGILAVFKQIEKRM 226



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 1/112 (0%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T+  +Y      G V T  + F  ++    +   +   R S NKL+ +   V+  +FR 
Sbjct: 9   FTNPDTYELY-WDGAVVTVQMVFLSLLIGGALAVPLAIMRTSKNKLINYPVWVFTYIFRG 67

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            P LV ++ +Y  V  +  I        F        ++F   T     +IF
Sbjct: 68  TPLLVQLYLIYYGVALIEGIQQTFWWAIFKEAFYPCLIAFVLNTAAYTTEIF 119


>gi|291482730|dbj|BAI83805.1| hypothetical protein BSNT_00597 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 226

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 14/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   L      +    +     I   S   G V+ LF   L+R       +    
Sbjct: 6   QWEYIFNTKLVIESFPYVIKGIGYTLLISFVSMFAGTVIGLFI-SLARMSKLALLRWPAK 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G+P LV++ + Y           F F   S       +  I  S  +AA+I
Sbjct: 65  LYISF--MRGVPILVILFILY-----------FGFPYISIQFSAVTAALIGFSLNSAAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RS + +V +GQ EAA +LGL++ +  R ++LPQ++   +PPL +  L+L+K SSLA
Sbjct: 112 AEINRSAISSVEKGQWEAASSLGLSYWQTMRGIILPQSIHIALPPLANVLLDLIKASSLA 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+     I  +    + + ++   IY ++  + A+F N L  K A
Sbjct: 172 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSIAAVFQNILEKKYA 223



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T  ++F  M   T+IG  +   R+S   L+ W  ++Y+   R +P LV++F 
Sbjct: 22  YVIKGIGYTLLISFVSMFAGTVIGLFISLARMSKLALLRWPAKLYISFMRGVPILVILFI 81

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           LY     +            G  LN
Sbjct: 82  LYFGFPYISIQFSAVTAALIGFSLN 106


>gi|119896731|ref|YP_931944.1| putative glutamine transport permease [Azoarcus sp. BH72]
 gi|119669144|emb|CAL93057.1| putative glutamine transport permease protein [Azoarcus sp. BH72]
          Length = 226

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 7/222 (3%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              F    +    ++ + + + GI L      L R    K  +   + YI+ F       
Sbjct: 12  NWRFLAEGLRYTVQVTLVATIGGIFLGTLL-ALMRLSSVKPLQWFAVGYINFFRSVP--- 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L + L     +     F G         S Y   + + AA+ AEI+RSG+ ++PR
Sbjct: 68  LVQVILAFYLIIPMVLQM---FTGKPMPIGAENSAYFTFTVFEAAYFAEIMRSGIQSIPR 124

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+ A  ALG T+ +  RLV+LPQA R+++P L +Q + L ++ SL  A+G  D      
Sbjct: 125 GQIGAGYALGFTYGQTMRLVVLPQAFRNMLPVLLTQTIVLFQDVSLVYAIGATDFFGAAD 184

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I  +  + +E+      +Y  L   ++  + RL  +IA+  
Sbjct: 185 KITQRDLRPVEMYTTVAAVYFVLCFSLSRLVKRLQTRIAIIR 226



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T  +     I    +GTL+   RLS+ K + W    Y+  FR++P + VI
Sbjct: 13  WRFLAEGLRYTVQVTLVATIGGIFLGTLLALMRLSSVKPLQWFAVGYINFFRSVPLVQVI 72

Query: 146 FFLYKSVLSVLPIPDHSIVLPF 167
              Y  +  VL +     +   
Sbjct: 73  LAFYLIIPMVLQMFTGKPMPIG 94


>gi|219853972|ref|YP_002471094.1| hypothetical protein CKR_0629 [Clostridium kluyveri NBRC 12016]
 gi|219567696|dbj|BAH05680.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 215

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 19/227 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M +    L    +T++      +FS  LG ++++      +    K  K +  LY   F 
Sbjct: 8   MDITGFILKGSLITIELFLITAIFSIPLGGIVAV-----GKISKIKPLKVILSLYTWAF- 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P L+ +   Y   F  PV+                +  +A +   AA++AEI R+G
Sbjct: 62  -RGTPLLLQLFFAY---FGLPVI--------GIRLSPLAAASLAFTINYAAYLAEIFRAG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ RGQ EAA ALG+ + +    +++PQA+R+++P + ++ +NL+K+S+L   +G  D
Sbjct: 110 IESIDRGQFEAAKALGMNYYETITKIIIPQAIRNVLPAVCNESINLVKDSALVATIGVGD 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L+     ++ +    I    I   +YL ++ ++ +   +L  K ++K
Sbjct: 170 LLRAAKEVVTRDF-TITPFFIAAALYLLITSVLVMGFRQLEKKYSVK 215



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L     I +  +G +V  G++S  K +  I  +Y   FR  P L+ +FF 
Sbjct: 14  ILKGSLITIELFLITAIFSIPLGGIVAVGKISKIKPLKVILSLYTWAFRGTPLLLQLFFA 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +               +N 
Sbjct: 74  YFGLPVIGIRLSPLAAASLAFTINY 98


>gi|188534335|ref|YP_001908132.1| glutamine ABC transporter permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188029377|emb|CAO97254.1| Glutamine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 219

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V   V G+++ L A   +R +     + + L++I
Sbjct: 1   MQFDWSAIWPAIPILLEGAKMTLLISVLGLVGGVIIGLVAG-FARAYGGWLSRNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ RG  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINRGFREAGLALGLSGRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMKI 218



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T  ++  G++   IIG + G  R     L   I  V++E+ R
Sbjct: 4   DWSAIWPAIPILLEGAKMTLLISVLGLVGGVIIGLVAGFARAYGGWLSRNIALVFIELIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|255310930|ref|ZP_05353500.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 6276]
 gi|255317230|ref|ZP_05358476.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 6276s]
          Length = 214

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 13/205 (6%)

Query: 187 AKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             I   S V G VL     T  SR+F  +  K L   Y+    + G P  + I + Y   
Sbjct: 19  LLITAISLVCGFVLGWGIGTVNSRYFPCRISKFLGNFYVVA--VRGTPLFIQILIVY--- 73

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P L + N           ++  IAL+  +AA++AE VR+G+ A+P  Q EAA  LG 
Sbjct: 74  FGLPSLIKVNL-------SPLVAGLIALTLNSAAYLAENVRAGINALPVQQWEAAKVLGY 126

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +    +L PQ  ++I+P LT+++++L+K SS+ + VG  +L  V   I+ +    +E
Sbjct: 127 TGPQIFLHILCPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPME 186

Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390
           + LI   +YL ++   + F      
Sbjct: 187 MYLICAGLYLIMTSAFSYFARLSEK 211


>gi|157146551|ref|YP_001453871.1| glutamine ABC transporter permease protein [Citrobacter koseri ATCC
           BAA-895]
 gi|157083756|gb|ABV13434.1| hypothetical protein CKO_02312 [Citrobacter koseri ATCC BAA-895]
          Length = 219

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I +     G+V+ L A   +R F       + L++I
Sbjct: 1   MEFDWSAIWPAIPLLIEGAKMTLWISILGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRGETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISILGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|307299985|ref|ZP_07579770.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti BL225C]
 gi|306904874|gb|EFN35457.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti BL225C]
          Length = 220

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 24/240 (10%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   +    +     T+   A   V + V+G+V ++           +     P+
Sbjct: 2   EWDWEFVRQIMPTLIEGLKTTILATALGSVVAAVIGLVFAIL----------RMTAPTPI 51

Query: 222 LYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             +++F    I G P LV +   + +  D                P  ++  I L  +  
Sbjct: 52  ARVTSFAVEFIRGTPLLVQLYFIFYVLPDI-----------GIRLPALVAGVIGLGIHYG 100

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            + AE+ R+G+  VPRGQ EAA A  LT R+    V+LPQA+  +IP L +  + + K +
Sbjct: 101 TYAAEVYRAGIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKET 160

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L  A+   +L++   +I N   + IE + +    +L +S++   F+  L A+ +  E++
Sbjct: 161 PLLSAITVLELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVFFLRWLEARYSRVEER 220



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 36/90 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                ++ G   T      G + A +IG +    R++A   +A +    VE  R  P LV
Sbjct: 10  QIMPTLIEGLKTTILATALGSVVAAVIGLVFAILRMTAPTPIARVTSFAVEFIRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            ++F++  +  +       +    G+ ++ 
Sbjct: 70  QLYFIFYVLPDIGIRLPALVAGVIGLGIHY 99


>gi|238019979|ref|ZP_04600405.1| hypothetical protein VEIDISOL_01855 [Veillonella dispar ATCC 17748]
 gi|237863503|gb|EEP64793.1| hypothetical protein VEIDISOL_01855 [Veillonella dispar ATCC 17748]
          Length = 218

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            +++ S   GI+L+L      R         +   ++  +L+ G P ++ I   Y   + 
Sbjct: 25  IVWILSIPGGILLALV-----RLSKFTVLDKIVEAFV--YLMRGTPLMLQILFVY---YA 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P++       G+    +  +  +      AA++ EI R G+ ++ RGQ E A  LG T+
Sbjct: 75  LPIIT-----DGAVQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQ  + ++PPL ++ +NLLK++SL   +   D++ +  +I+ +    I   
Sbjct: 130 AQTMRKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD-ISAF 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+    YL  + ++    N L  + A+ E
Sbjct: 189 LVAALFYLIFTFILTNIFNYLERRFAVYE 217



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L     I +   G L+   RLS   ++  I   +V + R  P ++ I F+
Sbjct: 12  IADGLKVTVSLFCIVWILSIPGGILLALVRLSKFTVLDKIVEAFVYLMRGTPLMLQILFV 71

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 72  YYALP 76


>gi|32266981|ref|NP_861013.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter hepaticus ATCC 51449]
 gi|32263033|gb|AAP78079.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter hepaticus ATCC 51449]
          Length = 249

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           P         +  +N  LS    T+  +    + + + G +  + A            +A
Sbjct: 27  PFAMWKFIDTLAQSNEFLSGFGYTLSVSILALLIALIFGTIGGVMA-----TSKITILRA 81

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +Y+  F         L+   + L+F  P L              F    + +  Y  
Sbjct: 82  YTRMYVEIFQNTP-----LVIQIFFLYFALPPL--------GIHLDVFSVGVLGVGAYHG 128

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+++E+VRSG++AVP+GQ EA+ + G T+ +  R ++LPQ ++ I+PP+T+Q +NL+KN+
Sbjct: 129 AYVSEVVRSGILAVPKGQFEASASQGFTYTQQMRYIILPQTIKIILPPITNQVVNLIKNT 188

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+ + +   +++ V  +    T       L   F+Y  +   +A F      ++ 
Sbjct: 189 SVLLIIAGGEIMYVADSYAGDTSNYAPAYLFAAFLYFIVCYPLAYFAKFYEDRLK 243



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 42/85 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T  ++   ++ A I GT+ G    S   ++    R+YVE+F+N P ++ IFFL
Sbjct: 43  FLSGFGYTLSVSILALLIALIFGTIGGVMATSKITILRAYTRMYVEIFQNTPLVIQIFFL 102

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y ++  +    D   V   G+   +
Sbjct: 103 YFALPPLGIHLDVFSVGVLGVGAYH 127


>gi|148252818|ref|YP_001237403.1| amino acid ABC transporter membrane protein [Bradyrhizobium sp.
           BTAi1]
 gi|146404991|gb|ABQ33497.1| amino acid ABC transporter membrane protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 219

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 17/233 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +     F +  +         T+       V  F++G ++++ +    R           
Sbjct: 3   YEWSFGFLLQYSKLIGVGTAYTIGFTILTAVAGFIVGCIVAIASLSNIRLISSP------ 56

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            L +   +    P LV +     +++  PVL               ++ +I+LS Y  AF
Sbjct: 57  -LVMLVEIFRCTPVLVQLV---WIYYALPVLIGVEL-------SPAVAAFISLSLYGGAF 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI+R G++++  GQ +A  ALG+      R +++PQA++ +IPPL +Q +  LKN+SL
Sbjct: 106 YSEIIRGGIVSIDPGQWDAGRALGMRRFDLMRRIVMPQALKRMIPPLVNQAVLQLKNTSL 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +   DL+  G  I + T + +E   +   IY  +   +      L A++A
Sbjct: 166 LSVLAVPDLLYQGQLITSATYRPLETYTMIAVIYFIILFPMTRVARVLEARLA 218



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 48/128 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y+  I VG   T        +   I+G +V    LS  +L++    + VE+FR  P LV
Sbjct: 12  QYSKLIGVGTAYTIGFTILTAVAGFIVGCIVAIASLSNIRLISSPLVMLVEIFRCTPVLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            + ++Y ++  ++ +     V  F       G  +  +       I    +  G  L + 
Sbjct: 72  QLVWIYYALPVLIGVELSPAVAAFISLSLYGGAFYSEIIRGGIVSIDPGQWDAGRALGMR 131

Query: 204 ATRLSRHF 211
              L R  
Sbjct: 132 RFDLMRRI 139


>gi|253690355|ref|YP_003019545.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756933|gb|ACT15009.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 227

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L + + +  + L +   T+        F+ VLG++L+L      R         +  LYI
Sbjct: 9   LAYLLKVFPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYI 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+P+LV + + Y   F  P L       G +      +  I  S  T+A++AEI
Sbjct: 64  SLF--RGIPSLVQLFIIY---FGLPQL-----FPGLSNLDAMTAAIIGFSLKTSAYMAEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL +V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+
Sbjct: 114 FRAGLSSVDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFAL 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ++L + G  I  ++ +  E  L+   IY  + I+ +    +L  K+    ++
Sbjct: 174 GVSELFAEGKMIAAESLRFFETFLVVGLIYWLVIIVYSWLQKQLEKKLNHSLQR 227



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T +LA   M  A ++G ++   R S   +V  I  +Y+ +FR IP LV +F +Y  +
Sbjct: 23  LPTTLFLAVVSMFFAMVLGLILALVRESKIVVVVKIVELYISLFRGIPSLVQLFIIYFGL 82

Query: 153 LSVLP 157
             + P
Sbjct: 83  PQLFP 87


>gi|153953343|ref|YP_001394108.1| amino acid ABC transporter permease [Clostridium kluyveri DSM 555]
 gi|146346224|gb|EDK32760.1| Predicted amino acid ABC transporter, permease protein [Clostridium
           kluyveri DSM 555]
          Length = 212

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 111/231 (48%), Gaps = 19/231 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   M +    L    +T++      +FS  LG ++++      +    K  K +  LY 
Sbjct: 1   MSELMDITGFILKGSLITIELFLITAIFSIPLGGIVAV-----GKISKIKPLKVILSLYT 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ +   Y   F  PV+                +  +A +   AA++AEI
Sbjct: 56  WAF--RGTPLLLQLFFAY---FGLPVI--------GIRLSPLAAASLAFTINYAAYLAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ RGQ EAA ALG+ + +    +++PQA+R+++P + ++ +NL+K+S+L   +
Sbjct: 103 FRAGIESIDRGQFEAAKALGMNYYETITKIIIPQAIRNVLPAVCNESINLVKDSALVATI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  DL+     ++ +    I    I   +YL ++ ++ +   +L  K ++K
Sbjct: 163 GVGDLLRAAKEVVTRDF-TITPFFIAAALYLLITSVLVMGFRQLEKKYSVK 212



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  L     I +  +G +V  G++S  K +  I  +Y   FR  P L+ +FF 
Sbjct: 11  ILKGSLITIELFLITAIFSIPLGGIVAVGKISKIKPLKVILSLYTWAFRGTPLLLQLFFA 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +               +N 
Sbjct: 71  YFGLPVIGIRLSPLAAASLAFTINY 95


>gi|52080938|ref|YP_079729.1| high affinity arginine transport system permease [Bacillus
           licheniformis ATCC 14580]
 gi|52786313|ref|YP_092142.1| YqiY [Bacillus licheniformis ATCC 14580]
 gi|319645106|ref|ZP_07999339.1| YqiY protein [Bacillus sp. BT1B_CT2]
 gi|52004149|gb|AAU24091.1| high affinity arginine transport system permease protein [Bacillus
           licheniformis ATCC 14580]
 gi|52348815|gb|AAU41449.1| YqiY [Bacillus licheniformis ATCC 14580]
 gi|317392915|gb|EFV73709.1| YqiY protein [Bacillus sp. BT1B_CT2]
          Length = 220

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+   A   V  F+LG++++L      +    K    +   Y S F   
Sbjct: 12  EMPFILEGLGVTLKVVAAAAVLGFLLGVLITLL-----KISSIKPLAWIADFYTSIF--R 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ + + Y   +  P +  F+          + +  IA    +AA+++EI+R+G+ 
Sbjct: 65  GTPLVLQLMIVY---YGLPQVLGFDI-------DAYWAAVIAFGLNSAAYVSEIIRAGIN 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +GQ EAA+ALG+ + K  + +LLPQA ++I+P L ++ + L K S++   +G  D++
Sbjct: 115 AIDKGQKEAAMALGVPYAKMMKDLLLPQAFKNIMPALINESITLTKESAVVTVIGLGDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                        +E +L    IY  L +++      +  K+ + +
Sbjct: 175 RRSYQAGAAIYSPLEPMLFAGLIYYVLVLILTFVGKAIERKLNVND 220



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 37/80 (46%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            + ++S       IL G   T  +  +  +   ++G L+   ++S+ K +AWI   Y  +
Sbjct: 3   FLDFSSTVPEMPFILEGLGVTLKVVAAAAVLGFLLGVLITLLKISSIKPLAWIADFYTSI 62

Query: 136 FRNIPPLVVIFFLYKSVLSV 155
           FR  P ++ +  +Y  +  V
Sbjct: 63  FRGTPLVLQLMIVYYGLPQV 82


>gi|110347318|ref|YP_666135.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110287494|gb|ABG65552.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chelativorans sp. BNC1]
          Length = 232

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 5/233 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L F   LN++ L +    +     +FV ++++   L++  T + R    +    L  LY+
Sbjct: 5   LDFTAILNDQYLHYFLTGIQNTIALFVLTWLVAFPLAVLLTVI-RSSGIRPLSWLIALYV 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  +P LV +   Y         G  +FI  +  + EF+   +AL  YTAA+++E 
Sbjct: 64  E--YHRNVPLLVQLLFWYFGISSLFPDGLNDFI--NQHNTEFIFALLALVLYTAAYMSED 119

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL A+ + Q EAA A+G    +     +LPQ  R  +PPL +Q L L K +SLA ++
Sbjct: 120 MRSGLRAISKTQFEAARAIGFGFVQTMTYAILPQVWRLSLPPLVNQTLILFKGTSLAASI 179

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G A+L      I + T +  E   +   +YL+ S+ +    + L  +  L+ +
Sbjct: 180 GVAELTFQARQIESITFRVFESFFVVSLLYLAGSLTLMFAGSWLAQRYKLRTR 232



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 38/83 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y    L G  NT  L     + A  +  L+   R S  + ++W+  +YVE  RN+P 
Sbjct: 12  NDQYLHYFLTGIQNTIALFVLTWLVAFPLAVLLTVIRSSGIRPLSWLIALYVEYHRNVPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV 164
           LV + F Y  + S+ P   +  +
Sbjct: 72  LVQLLFWYFGISSLFPDGLNDFI 94


>gi|330957763|gb|EGH58023.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 248

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +      R    +    +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVIAWIIALLLGSVLGVM-----RTVPNRLVSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     + ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENIQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYCNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A ++G+++G  R   N+LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVIAWIIALLLGSVLGVMRTVPNRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENIQEWYKQD 103


>gi|297190019|ref|ZP_06907417.1| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297150335|gb|EDY62587.2| ABC transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 276

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              FVF  VLG++++L      R       + L  +YI  F       L+ I +   +  
Sbjct: 78  VSGFVFGLVLGLIIALM-----RLSSVAPYRWLAGVYIEIFRGLPA-LLIFIFVGVAVPL 131

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P        G       +  + + L    AA++AE +R+G+ AVP+GQMEAA +LG +
Sbjct: 132 AFP--------GTEIPGGTYGKVALGLGLVAAAYMAETIRAGIQAVPKGQMEAARSLGFS 183

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   V++PQA R +IPPLT++ + L K+SSL + +G      +L   G  + +QT  
Sbjct: 184 HARAMVSVIIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASQTAN 243

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  I L+    YL +++ ++  + RL A+
Sbjct: 244 STPI-LVAGLCYLLVTVPLSFVVRRLEAR 271



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             NT     SG +   ++G ++   RLS+     W+  VY+E+FR +P L++  F+  +V
Sbjct: 70  LRNTVVYTVSGFVFGLVLGLIIALMRLSSVAPYRWLAGVYIEIFRGLPALLIFIFVGVAV 129

Query: 153 LSVLP 157
               P
Sbjct: 130 PLAFP 134


>gi|329940763|ref|ZP_08290043.1| binding-protein-dependent transporter subunit [Streptomyces
           griseoaurantiacus M045]
 gi|329300057|gb|EGG43955.1| binding-protein-dependent transporter subunit [Streptomyces
           griseoaurantiacus M045]
          Length = 279

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 19/209 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              FV   VLG+V++L      R       + +  +YI  F       L+ I +   +  
Sbjct: 80  LSGFVVGLVLGMVIALM-----RLSSVGPYRWVSGIYIEIFRGLPA-LLIFIFVGVAVPL 133

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P        G       +  + IAL   +AA++AE +R+G+ AVP+GQMEAA +LG +
Sbjct: 134 AFP--------GTEIPGGTYGKVAIALGLVSAAYMAETIRAGIQAVPKGQMEAARSLGFS 185

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   V++PQA R +IPPLT++ + L K+SSL + +G      +L   G  + +QT  
Sbjct: 186 HARAMISVVIPQAFRIVIPPLTNELVLLFKDSSLVLFLGVTLEERELAKFGRDLASQTAN 245

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  I L+    YL +++ +   + RL AK
Sbjct: 246 STPI-LVAGLCYLLVTVPLGFIVRRLEAK 273



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             NT     SG +   ++G ++   RLS+     W+  +Y+E+FR +P L++  F+  +V
Sbjct: 72  LKNTVLYTLSGFVVGLVLGMVIALMRLSSVGPYRWVSGIYIEIFRGLPALLIFIFVGVAV 131

Query: 153 LSVLP 157
               P
Sbjct: 132 PLAFP 136


>gi|330505509|ref|YP_004382378.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328919795|gb|AEB60626.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 231

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + ++ G+P L+ + L Y    +       +   GS     F +  
Sbjct: 41  KTSPYKPLQWLGGSYSTIVRGVPELLWVLLIYFSTVNVLRALGESLGVGSLELSPFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA  ALG++  +    +++PQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGQALGMSKGRILWKLIMPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   VG  +++      +  T   +   L+   IYL L+I+  + ++ L  
Sbjct: 161 FMILMKDTALVSVVGLTEIMRQAQIAVTATKNPMTFFLVAAIIYLGLTIIAMIGLHFLEK 220

Query: 391 KIALK 395
           K +  
Sbjct: 221 KASRG 225


>gi|190404350|ref|YP_001960981.1| rcorf6 [Agrobacterium rhizogenes]
 gi|158322146|gb|ABW33563.1| rcorf6 [Agrobacterium rhizogenes]
          Length = 240

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 13/239 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + F +             + T   +   S V+G+VL L    L      +  +    
Sbjct: 2   QFDIAFFLDFVFNPRPALLRGLLTTVLVAFASMVIGVVLGLVL-SLFGLSRWRVLRWFNS 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI-------GGSTVSPEFMSLYIALS 274
            YI  F+  G P LV + L Y   F  P L   +         G  ++S   ++   A +
Sbjct: 61  AYI--FVFRGTPLLVQVILIY---FGLPYLTNVDLFPQDVHLFGFISISGAIVAGVTAFA 115

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            + AA+ +EI R  + +V  GQ +A  A+G+T     + ++LPQA+R ++PPL +Q   +
Sbjct: 116 LHEAAYFSEISRGAIASVDHGQWDAGRAVGMTPGLLMQRIILPQAIRIMLPPLGNQMNGM 175

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            K +SL   +   +++ +   + + T +  E+ L     YL+L+   +     L  + +
Sbjct: 176 FKATSLLYLIAVPEMLFITDAVNSVTYKTFEVYLGVSIYYLALTTAWSFLQEALEKRYS 234



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 35/66 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G + T  +AF+ M+   ++G ++    LS  +++ W    Y+ VFR  P LV +  
Sbjct: 18  ALLRGLLTTVLVAFASMVIGVVLGLVLSLFGLSRWRVLRWFNSAYIFVFRGTPLLVQVIL 77

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 78  IYFGLP 83


>gi|153010586|ref|YP_001371800.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562474|gb|ABS15971.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 323

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 72/275 (26%), Positives = 121/275 (44%), Gaps = 15/275 (5%)

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L++ +        R  P    I  ++  +  +L I  +S  L F  F+  +     +  +
Sbjct: 64  LLSIVIFANWSFLRLFPRWAQITAIWLELFLLLMIFFYSFDLSFD-FIARKIGFLISQGV 122

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   I   S     +L+L    +++         L   Y S F       L L+   Y 
Sbjct: 123 VTTLYISAASIFFATILALIG-AVAKLSKNGLIYGLATFYTSLFR-----GLPLLMQIYI 176

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++   P +          V     +  +ALS    A++ EI R+G+ ++PRGQ E A AL
Sbjct: 177 IYLGLPQV--------GYVIGPIPAGILALSLCYGAYMTEIFRAGIESIPRGQQEGAYAL 228

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +   LV LPQAMR IIPP  +Q++ +LK+SSL   +G  +L+ +  T      + 
Sbjct: 229 GLGPSQTMWLVTLPQAMRIIIPPTGNQFIAMLKDSSLVSVIGVWELMYLARTQGQTEFRH 288

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           IE+++    IY +LSI++     +L A+      +
Sbjct: 289 IEMLITASMIYWALSIVLEYGQAKLEARFKRSIAR 323



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 17/98 (17%)

Query: 58  SLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG 117
            L   F++ + GF I Q                 G V T +++ + +  ATI+  +    
Sbjct: 104 DLSFDFIARKIGFLISQ-----------------GVVTTLYISAASIFFATILALIGAVA 146

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +LS N L+  +   Y  +FR +P L+ I+ +Y  +  V
Sbjct: 147 KLSKNGLIYGLATFYTSLFRGLPLLMQIYIIYLGLPQV 184


>gi|217972161|ref|YP_002356912.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           baltica OS223]
 gi|304411005|ref|ZP_07392621.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS183]
 gi|307301872|ref|ZP_07581630.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica BA175]
 gi|217497296|gb|ACK45489.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS223]
 gi|304350540|gb|EFM14942.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS183]
 gi|306913910|gb|EFN44331.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica BA175]
          Length = 226

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG VL +  T   +   +   +    LY+   +I G P +V + + Y +
Sbjct: 30  VTLIVTFFAMLLGAVLGIGTT-FMKMSSKWYIRFPANLYVG--VIRGTPVVVQLVILYFI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +  +    +  +  IA    + A+I+EI+R+G+ AV +GQ EAA +LG
Sbjct: 87  ------------VLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     + ++LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +  
Sbjct: 135 LSQAMTMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDS 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +     IYL L+      +++   ++   +
Sbjct: 195 VPLFTCALIYLFLTYSFTFVLSKFEKRLKQSD 226



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  M+   ++G      ++S+   + +   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMLLGAVLGIGTTFMKMSSKWYIRFPANLYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VLS 
Sbjct: 84  YFIVLSA 90


>gi|300992026|ref|ZP_07179758.1| glutamine ABC transporter permease protein [Escherichia coli MS
           200-1]
 gi|300305425|gb|EFJ59945.1| glutamine ABC transporter permease protein [Escherichia coli MS
           200-1]
          Length = 219

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +    +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVGTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|300722506|ref|YP_003711796.1| arginine ABC transporter membrane protein [Xenorhabdus nematophila
           ATCC 19061]
 gi|297629013|emb|CBJ89598.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus
           nematophila ATCC 19061]
          Length = 238

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 12/236 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLL 222
              L            + + S V+G+VL++          +             + LP +
Sbjct: 1   MSELQSLIGAAGVTVGLAISSLVVGLVLAMLFAAWESARWKPIAFLGSCWVTLIRGLPEI 60

Query: 223 YISTFLIFGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +  F+ FG    L+ ++  ++++           I    VSP F+   IALS   +A+ 
Sbjct: 61  LVVLFIYFGSSQFLITLSEGFEVNLIVWQFKVQMDINSFDVSP-FLCGVIALSLLYSAYA 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP GQ EA  ALGL+  +    +++PQ  R  +P L +Q+L LLK+++L 
Sbjct: 120 SQTLRGALKAVPIGQWEAGQALGLSQSRIFFRLVMPQMWRHALPGLGNQWLVLLKDTALV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   DL+    +I  +T +     +    IYL+++++    + RL  +    E+
Sbjct: 180 SLISVNDLMLQTKSIATRTQEPFTWYVTVAAIYLAITLISQFILRRLEMRATRFER 235


>gi|24372629|ref|NP_716671.1| amino acid ABC transporter, permease protein [Shewanella oneidensis
           MR-1]
 gi|24346665|gb|AAN54116.1|AE015549_2 amino acid ABC transporter, permease protein [Shewanella oneidensis
           MR-1]
          Length = 226

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG VL +  T L +   +   +    LY+   +I G P +V + + Y +
Sbjct: 30  VTLIVTFFAMLLGAVLGVGTT-LMKMSSKWYIRFPAELYVG--VIRGTPVVVQLVILYFI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +  +    +  +  IA    + A+I+EI+R+G+ AV +GQ EAA +LG
Sbjct: 87  ------------VLAALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     +L++LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +  
Sbjct: 135 LSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDS 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +     IYL L+      +++   ++   +
Sbjct: 195 VPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD 226



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  M+   ++G      ++S+   + +   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VL+ 
Sbjct: 84  YFIVLAA 90


>gi|298488719|ref|ZP_07006748.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156792|gb|EFH97883.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 248

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRL-----VSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRLIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|194433177|ref|ZP_03065459.1| glutamine ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|194418674|gb|EDX34761.1| glutamine ABC transporter, permease protein [Shigella dysenteriae
           1012]
 gi|332091105|gb|EGI96195.1| glutamine transport system permease protein glnP [Shigella
           dysenteriae 155-74]
          Length = 219

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARAFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218


>gi|322833086|ref|YP_004213113.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168287|gb|ADW73986.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 222

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 16/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +   P+ + +  + L +  +T+  +    + + VLGI+ +L           K   A   
Sbjct: 2   NFDFPYMLGVIPQILVYLPVTLLISFLSILLATVLGIIFALLLRA------GKIPAAFAH 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS F   G P LV + + Y   F  P +     I          ++ + LS  T+A++
Sbjct: 56  LYISFF--RGTPVLVQLLIIY---FGLPQI-----IPSMNSLSAMNAVILGLSLNTSAYL 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R+ + +V +GQ+EA++A GL+  KA+  +L PQA R+ IP   + Y+ L+KNSSLA
Sbjct: 106 AEIFRAAIDSVDKGQLEASLASGLSMFKASSRILFPQACRNAIPATGNVYIGLIKNSSLA 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G ++L++ G  +  ++ +  E       +Y +L+I+ +    RL   + 
Sbjct: 166 FTLGVSELLAAGKMVATESLKFFEAYFAVALVYWALTIIFSELQRRLEKHLG 217


>gi|320155823|ref|YP_004188202.1| histidine ABC transporterpermease HisM [Vibrio vulnificus MO6-24/O]
 gi|319931135|gb|ADV85999.1| histidine ABC transporter, permease protein HisM [Vibrio vulnificus
           MO6-24/O]
          Length = 225

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T A +   S V+G+ +++    ++R+            YI  F   G P L
Sbjct: 10  FPIYLDGLWTTAWLVAVSLVIGLGIAIPL-AVARNSRNYVVSLPAWGYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++H    R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSHWMTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+SL+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLTFLILWVFKNAEKRF 217



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++    I   +   R S N +V+     Y+  FR  P LV ++ +
Sbjct: 13  YLDGLWTTAWLVAVSLVIGLGIAIPLAVARNSRNYVVSLPAWGYIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y  +    P+ D      + 
Sbjct: 73  YYGMDQFFPVKDTLWENAWF 92


>gi|126435628|ref|YP_001071319.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126235428|gb|ABN98828.1| amino acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 307

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 8/186 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALK-------YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + ++  ++  G P  V +            +    P    F  +    +S  F    I L
Sbjct: 102 VAWVYLWIFRGTPVYVQLVFWGLFPTLYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGL 161

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
               AA++AEI+R+G+ +VP GQ EA+ ALG++     R  +LPQAMR IIPP  ++ ++
Sbjct: 162 GLNEAAYMAEIIRAGISSVPEGQSEASTALGMSWTMTMRRTVLPQAMRVIIPPTGNEIIS 221

Query: 334 LLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +LK +SL  AV +  +L      I     Q I ++++    YL+++ ++ +    L    
Sbjct: 222 MLKTTSLVTAVPYSMELYGRARDIAGVIFQPIPLLMVAATWYLAITSVLMVGQFYLERYF 281

Query: 393 ALKEKK 398
           +    +
Sbjct: 282 SRGASR 287



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 42/108 (38%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
            NT  L    M+ A ++G L+   RLS N +   +  VY+ +FR  P  V + F      
Sbjct: 68  WNTLQLTILSMVLALVLGVLLAVMRLSPNPVFKSVAWVYLWIFRGTPVYVQLVFWGLFPT 127

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
               I       P    +N +GLS           +   +++  I+ +
Sbjct: 128 LYQNIRIGIPFGPSFFEMNLQGLSISFTLAIIGLGLNEAAYMAEIIRA 175


>gi|218462904|ref|ZP_03502995.1| nopaline ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 249

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 5/207 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S   G  +S+    L R        A  L Y   F   G P LV + L Y  
Sbjct: 19  LTLVLTFASLAAGFAVSVPLAFL-RASSNPWASAPVLAYTYAF--RGTPLLVQLFLIYYG 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P++ Q      + +   F   +IA +  +AA   E++R G+ AVPRGQ+EAA +LG
Sbjct: 76  IGQLPLVRQSFL--WAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQAVPRGQIEAAKSLG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     RL++ P  +R  +P   ++ + +LK SSLA  +   ++  +   ++++T    
Sbjct: 134 LSRFHTARLIVFPLTLRIALPAYANEVVGMLKASSLASTITLLEVTGLARQLVSETFAPY 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E+ +     Y+ L+++I      L  +
Sbjct: 194 EVFIAAGAFYMLLTLLITQGFQMLETR 220


>gi|307255256|ref|ZP_07537071.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259691|ref|ZP_07541414.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861805|gb|EFM93784.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866231|gb|EFM98096.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 223

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L         K      I   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETSKQPCVSKPTS---IFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEK----ITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLKIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + + RL  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIARLEKRFTRFER 220


>gi|300868857|ref|ZP_07113463.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC
           6506]
 gi|300333074|emb|CBN58655.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC
           6506]
          Length = 217

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 13/226 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F  +  LS   L       +   +F+ G ++      L R    K  K L L+Y+  F  
Sbjct: 4   FTLSNILSNLLLATRWTIALSAIAFIGGGIVGFLVM-LMRISPNKIIKYLSLIYVEFF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F   V+   N          +++  IAL+ YT+AF+AEI R  +
Sbjct: 61  QGTPLLMQLFLTF---FGLSVIFNLNL-------SPWIAAAIALTTYTSAFLAEIWRGSV 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+ ALGL + K  + ++LPQA++  IPP     + ++K +SLA  +GF +L
Sbjct: 111 AAIPKGQWEASTALGLNYFKQLQRIILPQAIKMSIPPTVGFAVQVIKGTSLASVIGFVEL 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 I N T +   +  I   IY  L   ++L+   L  K A K
Sbjct: 171 TRSATAISNVTFKPFLVFTIAAVIYFCLCFPLSLWSKHLEQKFAYK 216



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 38/95 (40%)

Query: 95  NTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154
            T  L+    I   I+G LV   R+S NK++ ++  +YVE F+  P L+ +F  +  +  
Sbjct: 19  WTIALSAIAFIGGGIVGFLVMLMRISPNKIIKYLSLIYVEFFQGTPLLMQLFLTFFGLSV 78

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +  +     +                +   + A I
Sbjct: 79  IFNLNLSPWIAAAIALTTYTSAFLAEIWRGSVAAI 113


>gi|239833797|ref|ZP_04682125.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821860|gb|EEQ93429.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 241

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 10/228 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  +N   ++         A + V    L I++ L    L+     K  +  PL +I   
Sbjct: 24  GEMMNFSLMAEVFPYFLEAALVTVEISALAILIGLSVGALATA--AKLSRFWPLRFIGAA 81

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +        +   + L+F  P +       G  + P F +  I L     A+ AE +R 
Sbjct: 82  YVSVFRGTPCLLQLFVLYFGGPQI-------GINLEP-FAAGAIGLGLNIGAYYAEAMRG 133

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++ V  GQ EAA ++G +  ++ R V+LPQA R +I  L    + L+K S+L  A+   
Sbjct: 134 AILTVDAGQNEAARSIGFSSGQSMRFVVLPQAARLMIRSLGVNTVMLIKGSALVSAISVV 193

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L       I  T +  EI  I   IY+ L  ++A F++ L A+ ALK
Sbjct: 194 ELTYTAQRFIGSTYRPFEIFGIAAAIYMVLIYIVARFVDFLEARYALK 241



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L   + T  ++   ++    +G L  A +LS    + +I   YV VFR  P L+ +F 
Sbjct: 38  YFLEAALVTVEISALAILIGLSVGALATAAKLSRFWPLRFIGAAYVSVFRGTPCLLQLFV 97

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           LY     +    +       G+ LN        + 
Sbjct: 98  LYFGGPQIGINLEPFAAGAIGLGLNIGAYYAEAMR 132


>gi|240145778|ref|ZP_04744379.1| L-cystine ABC transporter, permease protein [Roseburia intestinalis
           L1-82]
 gi|257202110|gb|EEV00395.1| L-cystine ABC transporter, permease protein [Roseburia intestinalis
           L1-82]
          Length = 230

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             S     +     + + SF +G+++++    L         K +  +YI  F   G P 
Sbjct: 24  FWSMLRQGLLYTIPLTLVSFAIGVIIAVL-CALFIINKIPVLKQIAGIYIWVF--RGTPL 80

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + + Y              I       ++++   ALS    A+ AE +R+ ++++ +
Sbjct: 81  LVQLFIMYW------------GICNPLGINKWVACISALSLNVGAYSAETIRAAILSINK 128

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA  +LG+++++  R +++PQA    IPPL + ++ L+K++SLA  +   ++     
Sbjct: 129 GQWEAGYSLGMSYQQTFRRIIIPQAATVSIPPLFNTFIGLVKDTSLASTIMIGEMFRKAQ 188

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                + + + I +    IYL    ++      +  K+ + +
Sbjct: 189 EAAASSLEYLWIYIEVALIYLLFCTLLTGLQKWIEKKLRVGK 230



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           + + +  G + T  L         II  L     ++   ++  I  +Y+ VFR  P LV 
Sbjct: 24  FWSMLRQGLLYTIPLTLVSFAIGVIIAVLCALFIINKIPVLKQIAGIYIWVFRGTPLLVQ 83

Query: 145 IFFLY 149
           +F +Y
Sbjct: 84  LFIMY 88


>gi|170769014|ref|ZP_02903467.1| glutamine ABC transporter, permease protein [Escherichia albertii
           TW07627]
 gi|170122086|gb|EDS91017.1| glutamine ABC transporter, permease protein [Escherichia albertii
           TW07627]
          Length = 219

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I +     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISILGLAGGLVIGLAAG-FARTFGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG   G  R     +   I  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISILGLAGGLVIGLAAGFARTFGGWIANHIALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|126699792|ref|YP_001088689.1| amino-acid ABC transporter permease [Clostridium difficile 630]
 gi|255101314|ref|ZP_05330291.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|255307190|ref|ZP_05351361.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
 gi|115251229|emb|CAJ69060.1| ABC-type transport system,cystine/aminoacid-family permease
           [Clostridium difficile]
          Length = 222

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 118/234 (50%), Gaps = 15/234 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +    F + +    +    +T+  +   F  S +LG++L+ F    S     K  + + 
Sbjct: 2   SNFNFEFCLSIFPFLIKALGITILISIVAFFLSILLGVILAFFTQTKS-----KVLQYIT 56

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +Y+S F   G P L+ I   Y   F  P++  F           ++++ I L   ++A+
Sbjct: 57  RVYVSFF--RGTPLLIQIFFFY---FGFPMIFSF-----MKDCSPYLAIVICLGVNSSAY 106

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+ + +V +GQ EA  A GL+  ++   ++LPQA  S +PP+ S  L+++K SSL
Sbjct: 107 MAEIIRASIESVDKGQQEACYAFGLSKYQSMVKIILPQAATSAVPPIVSCTLDIIKGSSL 166

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + +G  DL+ V       + +  EI +I + IY ++SI+++   +++  +I  
Sbjct: 167 GLTIGIQDLMGVAQVEAASSFKYFEIYMITILIYWAVSIILSNIQSKVEKRIRR 220



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 33/78 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    ++     T  ++      + ++G ++     + +K++ +I RVYV  FR  P L+
Sbjct: 11  SIFPFLIKALGITILISIVAFFLSILLGVILAFFTQTKSKVLQYITRVYVSFFRGTPLLI 70

Query: 144 VIFFLYKSVLSVLPIPDH 161
            IFF Y     +      
Sbjct: 71  QIFFFYFGFPMIFSFMKD 88


>gi|313123230|ref|YP_004033489.1| glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312279793|gb|ADQ60512.1| Glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|325684594|gb|EGD26753.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 213

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 111/220 (50%), Gaps = 17/220 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  L     T+  +     FS ++G   ++  T  ++ +     +A+  +Y+  F    
Sbjct: 9   WSTFLLGFWNTILCSLISLFFSLIIGSGFAILETVPNKFW-----RAVAKVYVEIFRNIP 63

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L  + ++      +   P        G       F +  I LS Y++AFIAE VRSG+ +
Sbjct: 64  LLVVTMVF-----YLVLPTYTPLKLTG-------FQAGTIGLSIYSSAFIAETVRSGIQS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQME A + G+T+ +A R V+LPQA R +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 112 VGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIPPLGNQFVNLIKNSSILAFVAGFDLMY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  + + T Q I   ++    YL+L++ ++ +M  L  K
Sbjct: 172 QGDIVASNTFQTIPSYVLVSLFYLALTLPLSYYMQYLEKK 211



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 35/72 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            +  L+GF NT   +   +  + IIG+         NK    + +VYVE+FRNIP LVV 
Sbjct: 9   WSTFLLGFWNTILCSLISLFFSLIIGSGFAILETVPNKFWRAVAKVYVEIFRNIPLLVVT 68

Query: 146 FFLYKSVLSVLP 157
              Y  + +  P
Sbjct: 69  MVFYLVLPTYTP 80


>gi|224824054|ref|ZP_03697162.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224603473|gb|EEG09648.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 264

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      +V +  +G VL +  T           KA         L   +P
Sbjct: 42  WFVTGFGWTVAVALVAWVIALAIGSVLGVMRT-------LPDSKATSFASAYVALFRNVP 94

Query: 234 TLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L   +       +     S  +  ++S+ + L+ +TAA + E VR+G+ A
Sbjct: 95  LLVQLFVWYFLVPDWLPESAQTWFKQDLSPTTSAYISVVVCLALFTAARVCEQVRTGIQA 154

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA+A+G +  +  R VLLPQA R IIPPLT+++L + KNSS+A  +G  +L++
Sbjct: 155 LPKGQSHAALAMGFSRVQIYRHVLLPQAFRIIIPPLTTEFLAIFKNSSVASLIGLMELLA 214

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   T    E   +   IY  L++ +   M R+  ++ +
Sbjct: 215 QTKQTAEFTANIFEAFTLATVIYFVLNMSLMKLMGRVEDRLRV 257



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 34/83 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + GF  T  +A    + A  IG+++G  R   +         YV +FRN+P LV 
Sbjct: 39  YLDWFVTGFGWTVAVALVAWVIALAIGSVLGVMRTLPDSKATSFASAYVALFRNVPLLVQ 98

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +F  Y  V   LP    +     
Sbjct: 99  LFVWYFLVPDWLPESAQTWFKQD 121


>gi|152999485|ref|YP_001365166.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           baltica OS185]
 gi|160874105|ref|YP_001553421.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           baltica OS195]
 gi|151364103|gb|ABS07103.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS185]
 gi|160859627|gb|ABX48161.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS195]
 gi|315266337|gb|ADT93190.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella baltica OS678]
          Length = 226

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG VL +  T   +   +   +    LY+   +I G P +V + + Y +
Sbjct: 30  VTLIVTFFAMLLGAVLGIGTT-FMKMSSKWYIRFPANLYVG--VIRGTPVVVQLVILYFI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +  +    +  +  IA    + A+I+EI+R+G+ AV +GQ EAA +LG
Sbjct: 87  ------------VLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     + ++LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +  
Sbjct: 135 LSQAMTMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDS 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +     IYL L+      +++   ++   +
Sbjct: 195 VPLFTCALIYLFLTYSFTFVLSKFEKRLKQSD 226



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  M+   ++G      ++S+   + +   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMLLGAVLGIGTTFMKMSSKWYIRFPANLYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VLS 
Sbjct: 84  YFIVLSA 90


>gi|50119206|ref|YP_048373.1| putative amino acid transport system permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49609732|emb|CAG73166.1| putative amino-acid transport system permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 221

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           + P+   + +   S  +  +     + + SF+ G+ L +    L R +  K  K L   Y
Sbjct: 1   MPPWLQLMADSFWSLLSAGLKFTVPLAILSFIFGLALGILI-ALVRLYGPKPLKWLGDFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  +    A+ +E
Sbjct: 60  V--WVIRGTPLLVQLFLIFY-----------GLPSAGITLDAFPAALIGFTVSVGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  +++VP+GQ  AA +LG+  R+A R V+ PQ++   +PPL++ +++L+K++SLA  
Sbjct: 107 IVRGAILSVPKGQWSAAYSLGMNGRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I++ T + + + +    IYL  S +++    +L      
Sbjct: 167 ITVPEMFLSAQRIVSVTYEPLILYVEAALIYLMFSTVLSQLQAKLEKYYQR 217



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+ + +  G   T  LA    I    +G L+   RL   K + W+   YV V R  P 
Sbjct: 9   ADSFWSLLSAGLKFTVPLAILSFIFGLALGILIALVRLYGPKPLKWLGDFYVWVIRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S     D       G  ++
Sbjct: 69  LVQLFLIFYGLPSAGITLDAFPAALIGFTVS 99


>gi|161507108|ref|YP_001577062.1| glutamine ABC transporter permease [Lactobacillus helveticus DPC
           4571]
 gi|160348097|gb|ABX26771.1| Glutamine ABC transporter permease [Lactobacillus helveticus DPC
           4571]
          Length = 213

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T+  +    +FS +LG+  +L           K GK +  +YI+ F    
Sbjct: 9   WGSFLTGFWNTILCSIIALIFSLILGVFFALLEVA-----PTKFGKIVAKVYIAIF--RN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV++ + Y +                     F +  I L+ YT+AFIAE VR+G+ +
Sbjct: 62  IPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGLTLYTSAFIAETVRAGISS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 IGTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVNLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I   T + I+  ++    YL L++ ++ +M  L  K+A
Sbjct: 171 QAQLIAFSTFRTIDTYVVVGLFYLILTLPLSYYMRHLEKKLA 212



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + L GF NT   +   +I + I+G       ++  K    + +VY+ +FRNIP LV++
Sbjct: 9   WGSFLTGFWNTILCSIIALIFSLILGVFFALLEVAPTKFGKIVAKVYIAIFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
              Y  V   +           G+ L     
Sbjct: 69  MIFYLIVPRYIVKLSGFQAGTIGLTLYTSAF 99


>gi|254247530|ref|ZP_04940851.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124872306|gb|EAY64022.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 250

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 80/175 (45%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T LI G+P LVL+ L +        L              F++  + L     A+  E
Sbjct: 73  VYTTLIRGVPDLVLMLLLFYSLQIWLNLATDALGWDQIDIDPFLAGVLVLGFIYGAYFTE 132

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   
Sbjct: 133 TFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSI 192

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     LI   +YL+++ +    +  L  + +   +K
Sbjct: 193 IGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAITTISNFVLMWLEKRYSTGVRK 247


>gi|302517800|ref|ZP_07270142.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|318061024|ref|ZP_07979745.1| transporter transmembrane component [Streptomyces sp. SA3_actG]
 gi|302426695|gb|EFK98510.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 340

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 15/259 (5%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--------- 202
            L+   +   +  +  G+  N                I     +   V +L         
Sbjct: 52  WLATAVVLVLAAQVVHGLVTNPFYQWDRFAYWFLRPTILDGLLITLEVTALSAVLGLLGG 111

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LKYQLHFDKPVLGQFNFI 257
               L R       +A+   YI       L  L+L       L   L    P    F   
Sbjct: 112 VVLALGRLSRSPVLRAVSWTYIWLLRSTPLIVLLLFLYNFSALYQTLSLGVPFGPAFFTF 171

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             S ++ +     I LS   AA+ AE+VR+GL++V +GQ EAA ALGL  R     ++LP
Sbjct: 172 DESRLATDMAIAVIGLSLNEAAYAAEVVRAGLLSVDQGQHEAAAALGLPRRFQFLRIVLP 231

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLS 376
           QA+R+I+P   +Q + L+K++SL   V   DL     ++ +   G  + ++L+    Y+ 
Sbjct: 232 QALRAIVPGYVNQLIGLVKSTSLVFYVSLLDLFGSVQSLGSTYPGDIVPLLLVATVWYVL 291

Query: 377 LSIMIALFMNRLNAKIALK 395
           L+ ++++    +  + +  
Sbjct: 292 LTSLVSIAQFYVERRSSRG 310



 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 78  PYTSDSSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           P+     +A   L      G + T  +     +   + G ++  GRLS + ++  +   Y
Sbjct: 73  PFYQWDRFAYWFLRPTILDGLLITLEVTALSAVLGLLGGVVLALGRLSRSPVLRAVSWTY 132

Query: 133 VEVFRNIPPLVVIFFLYK 150
           + + R+ P +V++ FLY 
Sbjct: 133 IWLLRSTPLIVLLLFLYN 150


>gi|126730762|ref|ZP_01746572.1| amino acid ABC transporter protein, permease protein [Sagittula
           stellata E-37]
 gi|126708928|gb|EBA07984.1| amino acid ABC transporter protein, permease protein [Sagittula
           stellata E-37]
          Length = 222

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 14/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +        L      +    +  V + VL +V+ L    L R       +   + Y 
Sbjct: 1   MRWDWAYAQSILPRIAEGLTVTLQATVLATVLALVVGL-GFALGRRSSNVIIRN--VFYW 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I   P LV +   +           F         P   S  +AL  +T+A+++E+
Sbjct: 58  LCEFIRRTPVLVQMYFVF-----------FVLPRLGLTLPALTSGILALGLHTSAYMSEV 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ +V +GQ E A AL +   +    V+LPQA+  +IP   +  L + K ++L   +
Sbjct: 107 YRAGIESVAKGQWEGARALNIPIVRLWVHVILPQALPPMIPAAGNYVLMMFKETALLSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +++     I N+T +  E I I   IYL++S+  A+ +  +  KI   +K
Sbjct: 167 TVLEMMGTARVIGNETYRYFEPITIVGAIYLAISLPAAMVVRWVEEKIRRSKK 219



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 82  DSSYATAILV----GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D +YA +IL     G   T        + A ++G     GR S+N ++  +     E  R
Sbjct: 4   DWAYAQSILPRIAEGLTVTLQATVLATVLALVVGLGFALGRRSSNVIIRNVFYWLCEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSV 155
             P LV ++F++  +  +
Sbjct: 64  RTPVLVQMYFVFFVLPRL 81


>gi|320547238|ref|ZP_08041531.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448126|gb|EFW88876.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 234

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 15/240 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L+    P                      T+  +    + +F+LG++    +     
Sbjct: 1   MFLLTAAASPFALSRWADFFANFGEFAKGFLYTLGMSFCALILAFILGVIFGAMS----- 55

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               K  +A+  +Y+  F     P LV     Y                G+ +   F + 
Sbjct: 56  SSKNKILRAIARVYVEVF--QNTPLLVQFVFVYYGLAIM--------TNGAIMISTFFTA 105

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + +  Y  A+IAE++RSG+ AVP+GQ EAA++ G T+ +   L++LPQA+R+I+PPLT+
Sbjct: 106 VLCVGIYHGAYIAEVIRSGIEAVPKGQTEAALSQGFTYSQTMSLIILPQAVRTILPPLTN 165

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q +NL+KN+S    +  AD++        +T   +        +Y  +   +A +     
Sbjct: 166 QVVNLIKNTSTVAIISGADIMFTAKAWAYETTNYVPAFAGAALLYFIMCFPLATWARHKE 225



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/64 (42%), Positives = 38/64 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++F  +I A I+G + GA   S NK++  I RVYVEVF+N P LV   F+
Sbjct: 26  FAKGFLYTLGMSFCALILAFILGVIFGAMSSSKNKILRAIARVYVEVFQNTPLLVQFVFV 85

Query: 149 YKSV 152
           Y  +
Sbjct: 86  YYGL 89


>gi|168756599|ref|ZP_02781606.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|168767315|ref|ZP_02792322.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189356223|gb|EDU74642.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363604|gb|EDU82023.1| glutamine ABC transporter, permease protein [Escherichia coli
           O157:H7 str. EC4486]
          Length = 219

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMALWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218


>gi|120603331|ref|YP_967731.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|120563560|gb|ABM29304.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio vulgaris DP4]
          Length = 278

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 14/179 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +TG+ +  LY+ +  +   P LV + + Y              I          S  +AL
Sbjct: 110 RTGRLVARLYVES--VRNTPLLVQLFVTY------------FAIAPVFGLGRMASAVMAL 155

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +  A++AEI+R+G+ AVP+GQ EA+ +LG+        V+LPQA+R  +PPLT Q ++
Sbjct: 156 GVFEGAYMAEILRAGIAAVPQGQWEASRSLGMDEPGTYVQVILPQALRRALPPLTGQAVS 215

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+K+SSLA A+   +L     TII +T    E+ L+   IYL +++ ++     L  ++
Sbjct: 216 LVKDSSLASAIAIHELTMQAQTIIAETFLTFEVWLLTAAIYLCVTLSLSAVARLLERRM 274


>gi|322616304|gb|EFY13213.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619554|gb|EFY16429.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622750|gb|EFY19595.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628662|gb|EFY25449.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631599|gb|EFY28355.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637126|gb|EFY33829.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641674|gb|EFY38310.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644531|gb|EFY41071.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648465|gb|EFY44917.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654200|gb|EFY50523.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658115|gb|EFY54382.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663589|gb|EFY59791.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670325|gb|EFY66465.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671561|gb|EFY67683.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676917|gb|EFY72984.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682842|gb|EFY78861.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686521|gb|EFY82503.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323194582|gb|EFZ79775.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199087|gb|EFZ84183.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202042|gb|EFZ87101.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208932|gb|EFZ93869.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323213917|gb|EFZ98687.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215231|gb|EFZ99976.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323220849|gb|EGA05287.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323227291|gb|EGA11459.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229909|gb|EGA14032.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233134|gb|EGA17230.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240869|gb|EGA24911.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243186|gb|EGA27206.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248725|gb|EGA32653.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251729|gb|EGA35596.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257541|gb|EGA41229.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261456|gb|EGA45037.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267887|gb|EGA51366.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272046|gb|EGA55461.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 219

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + LL+I
Sbjct: 1   MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAG-FARTFGGWFANHIALLFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 33/79 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G+    +IG   G  R         I  +++E+ R
Sbjct: 4   DWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALLFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|296103260|ref|YP_003613406.1| glutamine ABC transporter permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057719|gb|ADF62457.1| glutamine ABC transporter permease protein [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 219

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V   V G+++ L A   +R +       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLLEGAKMTLWISVLGLVGGLIIGLVAG-FARTYGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAFT------DLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      +YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVVYLIITLVLSFVLRRLERRMKI 218



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G++   IIG + G  R     +   I  V++EV R
Sbjct: 4   DWSAIWPAIPLLLEGAKMTLWISVLGLVGGLIIGLVAGFARTYGGWIANHIALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|183396653|dbj|BAG28252.1| permease protein of amino acid ABC transporter [Desulfotignum
           balticum]
          Length = 220

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 13/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VFSFVL + +S+    L           L  +Y+  F     P L+ +   Y    
Sbjct: 23  LTIGVFSFVLALAVSVLVGVLRSGRLPWIVDFLLGVYVEIF--RNTPLLIQLFFIYY--- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V P   +  I LS  + A+++E VR+ + +V +GQ EAA +LG  
Sbjct: 78  --------GLPTFGIVLPPVTAAVIGLSLNSGAYMSEAVRAAISSVNKGQYEAAFSLGYN 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++LPQA R  +P L + +  ++K +SL   +  A+L  VG  I  +T    EI
Sbjct: 130 RYQVFLHIVLPQAFRIALPTLMNYFTTMIKETSLVSVLSIAELTRVGNQIYARTLGPFEI 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +    +Y  ++  +AL    +  K
Sbjct: 190 YITIGAVYFVMTYSVALVSRWVEKK 214



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 1/103 (0%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVE 134
            + ++    Y   +      T  +     + A  +  LVG  R      +V ++  VYVE
Sbjct: 2   PLDFSFLIPYVPQLATAARITLTIGVFSFVLALAVSVLVGVLRSGRLPWIVDFLLGVYVE 61

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +FRN P L+ +FF+Y  + +   +         G+ LN+    
Sbjct: 62  IFRNTPLLIQLFFIYYGLPTFGIVLPPVTAAVIGLSLNSGAYM 104


>gi|16264164|ref|NP_436956.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|15140289|emb|CAC48816.1| EhuD [Sinorhizobium meliloti 1021]
          Length = 220

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 12/231 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
           M  +   +     T+    KI + +  LG V++     +           +  +      
Sbjct: 1   MEWDWEFVRQIMPTLIEGLKITILATALGSVVAAVIGLVFAILRMTAPTPIARVTSFAVE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV +   + +  D                P  ++  I L  +   + AE+ R+
Sbjct: 61  FIRGTPLLVQLYFIFYVLPDI-----------GIRLPALVAGVIGLGIHYGTYAAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VPRGQ EAA A  LT R+    V+LPQA+  +IP L +  + + K + L  A+   
Sbjct: 110 GIENVPRGQWEAAKATNLTARQTWIHVILPQAIPPMIPALANYLIAMFKETPLLSAITVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L++   +I N   + IE + +    +L +S++   F+  L A+ +  E++
Sbjct: 170 ELMNQAKSIANSNYRYIEPMTLVGVFFLIMSLISVFFLRWLEARYSRVEER 220



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 36/90 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                ++ G   T      G + A +IG +    R++A   +A +    VE  R  P LV
Sbjct: 10  QIMPTLIEGLKITILATALGSVVAAVIGLVFAILRMTAPTPIARVTSFAVEFIRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            ++F++  +  +       +    G+ ++ 
Sbjct: 70  QLYFIFYVLPDIGIRLPALVAGVIGLGIHY 99


>gi|300811422|ref|ZP_07091918.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497657|gb|EFK32683.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 213

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 17/220 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  L     T+  +     FS ++G   ++  T  ++ +     + +  +Y+  F    
Sbjct: 9   WSTFLLGFWNTILCSLISLFFSLIIGSGFAILETVPNKFW-----RGVAKVYVEIFRNIP 63

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L  + ++      +   P        G       F +  I LS Y++AFIAE VRSG+ +
Sbjct: 64  LLVVTMVF-----YLVLPTYTPLKLTG-------FQAGTIGLSIYSSAFIAETVRSGIQS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQME A + G+T+ +A R V+LPQA R +IPPL +Q +NL+KNSS+   V   DL+ 
Sbjct: 112 VGTGQMEGARSNGMTYWQAMRYVILPQAFRIVIPPLGNQLVNLIKNSSILAFVAGFDLMY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  + + T Q I   ++    YL L++ ++ +M  L  K
Sbjct: 172 QGDIVASNTFQTIPSYVLVSLFYLVLTLPLSYYMQYLEKK 211



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 35/72 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            +  L+GF NT   +   +  + IIG+         NK    + +VYVE+FRNIP LVV 
Sbjct: 9   WSTFLLGFWNTILCSLISLFFSLIIGSGFAILETVPNKFWRGVAKVYVEIFRNIPLLVVT 68

Query: 146 FFLYKSVLSVLP 157
              Y  + +  P
Sbjct: 69  MVFYLVLPTYTP 80


>gi|17988945|ref|NP_541578.1| cystine transport system permease protein [Brucella melitensis bv.
           1 str. 16M]
 gi|17984778|gb|AAL53842.1| cystine transport system permease protein [Brucella melitensis bv.
           1 str. 16M]
          Length = 244

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 13/243 (5%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             +        ++P  + L    L              +       +     T L R F 
Sbjct: 7   FIIPITAKEPKLVPDWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLFA 66

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
                ++   Y+  F   G P LV + + +                       F +  I 
Sbjct: 67  PVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGVYLDAFPAALIG 113

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL++ ++
Sbjct: 114 FTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFI 173

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    RL  + 
Sbjct: 174 SLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERRF 233

Query: 393 ALK 395
              
Sbjct: 234 GRY 236


>gi|113971389|ref|YP_735182.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           sp. MR-4]
 gi|117919333|ref|YP_868525.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           sp. ANA-3]
 gi|113886073|gb|ABI40125.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sp. MR-4]
 gi|117611665|gb|ABK47119.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sp. ANA-3]
          Length = 226

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG VL +  T L +   +   +    LY+   +I G P +V + + Y +
Sbjct: 30  VTLIVTFFAMLLGAVLGVGTT-LMKMSSKWYIRFPAELYVG--VIRGTPVVVQLVILYFI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +  +    +  +  IA    + A+I+EI+R+G+ AV +GQ EAA +LG
Sbjct: 87  ------------VLAAFDVDKVTAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     +L++LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +  
Sbjct: 135 LSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDS 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +     IYL L+      +++   ++   +
Sbjct: 195 IPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD 226



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  M+   ++G      ++S+   + +   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSVL 156
           Y  VL+  
Sbjct: 84  YFIVLAAF 91


>gi|207723709|ref|YP_002254107.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206588913|emb|CAQ35875.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 231

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 21/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HF 211
           +P   + +      +   +S   L++  +   FV +  LGIV++L     S         
Sbjct: 1   MPHFDLSMLLSGQYHQWLVSGFFLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQT 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + +  + +PLL    F  FG P L+  A++  L+                ++ E  S  I
Sbjct: 61  YVEAIRNVPLLAHMLFWYFGAPQLLPNAVRTWLY---------------DLNYEAASAVI 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA++AE +RSGL ++P+ Q+EA+ ALGL+  +A R V+LPQ++R  +PPL SQ 
Sbjct: 106 ALVLYTAAYMAEDIRSGLRSIPKEQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQT 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL KNSS+A+ +G A+L+     + + T +  E        YL++SI I +F      +
Sbjct: 166 LNLWKNSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLTISIAITVFSAWYQHR 225

Query: 392 IALK 395
             ++
Sbjct: 226 YPVR 229



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GF  +  L+    + A  +G +V   R++ +  +  I + YVE  RN+P 
Sbjct: 11  SGQYHQWLVSGFFLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQTYVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           L  + F Y     +LP    + +  
Sbjct: 71  LAHMLFWYFGAPQLLPNAVRTWLYD 95


>gi|228478305|ref|ZP_04062913.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|312863121|ref|ZP_07723359.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|322517165|ref|ZP_08070048.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
 gi|228249984|gb|EEK09254.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|311100657|gb|EFQ58862.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|322124224|gb|EFX95740.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 226

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 114/235 (48%), Gaps = 9/235 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F     +       +T+  +  +  F  +LG+++SL     ++    K  + L  L
Sbjct: 1   MNFSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSL-----AKRSGIKPLEWLVSL 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F   G P +V I + + L        QF  +         +   I LS  + A+I+
Sbjct: 56  YVWVF--RGTPMVVQIMIAFNLIHMNLPTVQFGILNLDL--SRIVPGIIVLSLNSGAYIS 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G+ ++P+GQ+EAA +LG+      R V+LPQA+++I+P L ++++ ++K+SSL  
Sbjct: 112 ESVRAGIESIPKGQVEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQ 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  +L +   T+   T   +  +L   F YL ++  +   + ++  ++    K
Sbjct: 172 TIGVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGEGRK 226



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    + +    G + T  ++   +   TI+G LV   + S  K + W+  +YV VFR 
Sbjct: 3   FSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSLAKRSGIKPLEWLVSLYVWVFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDH 161
            P +V I   +  +   LP    
Sbjct: 63  TPMVVQIMIAFNLIHMNLPTVQF 85


>gi|226942879|ref|YP_002797952.1| Amino acid ABC transporter permease [Azotobacter vinelandii DJ]
 gi|226717806|gb|ACO76977.1| Amino acid ABC transporter, permease protein [Azotobacter
           vinelandii DJ]
          Length = 247

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 14/241 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS----------RHFHEKT 215
               +          +  +     FV  F   + ++L    ++          R    + 
Sbjct: 1   MDYNWDWGVFFRSTGIGDEIYLDWFVAGFGWTLAVALVGWIIALLLGSLLGVLRTLPNRW 60

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIAL 273
              +   Y+  F    +P LV + L Y L  D     L  +     S  +  ++S+ + L
Sbjct: 61  LSGIASAYVELF--RNVPLLVQLFLWYFLVPDLLPTPLELWFKQDLSPATSAYLSVVVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +TAA + E VR+G+ A+PRGQ  AA ALGL   +  R VLLPQA R IIPPLTS++LN
Sbjct: 119 GLFTAARVCEQVRTGIQALPRGQTAAAQALGLRSGQIYRQVLLPQAFRIIIPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++KNSS+A  +G  +L++        T    E   +   IY +L++ + LFM  +  K+A
Sbjct: 179 IIKNSSVASLIGLMELLAQTRQTAEFTTNLFEAFTLATLIYFTLNMSLMLFMRWIEKKVA 238

Query: 394 L 394
           +
Sbjct: 239 V 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + GF  T  +A  G I A ++G+L+G  R   N+ ++ I   YVE+FRN+P LV 
Sbjct: 21  YLDWFVAGFGWTLAVALVGWIIALLLGSLLGVLRTLPNRWLSGIASAYVELFRNVPLLVQ 80

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +F  Y  V  +LP P        
Sbjct: 81  LFLWYFLVPDLLPTPLELWFKQD 103


>gi|325496746|gb|EGC94605.1| glutamine ABC transporter permease protein [Escherichia fergusonii
           ECD227]
          Length = 219

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWTAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++  +    ++ G   T W++  G+    +IG L G  R     +   I  V++EV R
Sbjct: 4   DWSAIWTAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHIALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|317123398|ref|YP_004097510.1| amino acid ABC transporter permease [Intrasporangium calvum DSM
           43043]
 gi|315587486|gb|ADU46783.1| amino acid ABC transporter membrane protein, PAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 333

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 112/285 (39%), Gaps = 27/285 (9%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF---- 192
           R +P       L    + V  +    +      F     +      ++   K  +     
Sbjct: 25  RPVPHPWRWVALAAIAVVVAMVASSFLTNERWNFPQALRIMNFNPVLEGLLKGTLLGTAG 84

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LKYQLHFD 247
           + VLG+V  + A  + R       + +  ++   F       L+++      L   L   
Sbjct: 85  AMVLGVVFGV-AIAVMRLSANPVLRGVSFVFTWFFRAIPRYVLLVMMGSIGYLYPDLALG 143

Query: 248 KPVLGQFNFIGGSTVSPEFMSL----------------YIALSCYTAAFIAEIVRSGLIA 291
            P   Q     G      F ++                 I L    AA++AEI R+G+++
Sbjct: 144 LPFGQQLAESLGWGTDLTFATVDVNRFSTGISTGIFLGIIGLGLSEAAYMAEIARAGILS 203

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLV 350
           V +GQ EAA ALG++  K  R ++LPQAMR I+PP  ++ + ++K++SL  A+    +L 
Sbjct: 204 VDKGQAEAAQALGMSSGKTMRRIVLPQAMRVIVPPTGNETIAMVKDTSLLTAIPVQMELF 263

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +    I  +T Q +  ++  +  YL +  ++ +    L       
Sbjct: 264 NQTRIIGTRTLQIMPSLVAAVGWYLIVCSVLMVGQYYLERYFGRG 308



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 4/122 (3%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T       M+   + G  +   RLSAN ++  +  V+   FR IP  V++  +    
Sbjct: 75  LKGTLLGTAGAMVLGVVFGVAIAVMRLSANPVLRGVSFVFTWFFRAIPRYVLLVMMGSIG 134

Query: 153 LSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
                 PD ++ LPFG     + G          +   F      GI L +    LS   
Sbjct: 135 YLY---PDLALGLPFGQQLAESLGWGTDLTFATVDVNRFSTGISTGIFLGIIGLGLSEAA 191

Query: 212 HE 213
           + 
Sbjct: 192 YM 193


>gi|229541936|ref|ZP_04430996.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229326356|gb|EEN92031.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 235

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 21/222 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    +T++      V SF++G +L +              K   L  I   ++    
Sbjct: 14  YLLKGFAVTLEVAFVAIVLSFLIGCILGILRYA----------KIPILSPIVALVVEITR 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L LI + +  +F  P +G    +          +   AL+ + +A IAEIVR GL A+P
Sbjct: 64  NLPLILIIFFTYFALPEVGMKMSVT--------AAAISALTVFESAMIAEIVRGGLNAIP 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ+EAA + GL + +    ++LPQA++ +IPPL SQ+++LLK++SLA+ +   +L+   
Sbjct: 116 KGQIEAARSSGLKYIQTLWYIILPQALKKMIPPLVSQFISLLKDTSLAIIIALPELLHNA 175

Query: 354 GTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I N  G     I I+L+  F+Y  ++ ++++   RL  ++
Sbjct: 176 KGIYNGEGGSKYIIPILLMAAFMYFVVNYLLSILARRLEKRL 217



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 41/73 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L GF  T  +AF  ++ + +IG ++G  R +   +++ I  + VE+ RN+P +++IFF
Sbjct: 14  YLLKGFAVTLEVAFVAIVLSFLIGCILGILRYAKIPILSPIVALVVEITRNLPLILIIFF 73

Query: 148 LYKSVLSVLPIPD 160
            Y ++  V     
Sbjct: 74  TYFALPEVGMKMS 86


>gi|118475743|ref|YP_891955.1| amino-acid ABC transporter permease protein YckJ [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118414969|gb|ABK83389.1| probable amino-acid ABC transporter permease protein YckJ
           [Campylobacter fetus subsp. fetus 82-40]
          Length = 210

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 13/214 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+  +   F+    +GI+++L     S++      K +   YIS  +I G P LV + 
Sbjct: 7   QYTIPLSLISFILGISIGIMVALIRIDSSKNLLTTILKYICAFYIS--IIRGTPLLVQLF 64

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +    +           G T++P F+S  IA S    A+ +E +R+ ++AVP+GQ EA
Sbjct: 65  IIFYGLPNI----------GITLNP-FISSIIAFSLNIGAYSSETIRASILAVPKGQWEA 113

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             ++G+ +      ++ PQA +  +P L++ +++L+K+SSLA  V  A+L     TI +Q
Sbjct: 114 GWSIGMNNFDTFTKIIAPQAFKIALPTLSNTFISLVKDSSLASVVLVAELFREAQTIASQ 173

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             + +        IY  + I +     +L  K +
Sbjct: 174 NYEFLLTYSEAALIYWVICIFLGYLQTKLEIKFS 207


>gi|330817962|ref|YP_004361667.1| histidine transport system permease [Burkholderia gladioli BSR3]
 gi|327370355|gb|AEA61711.1| histidine transport system permease [Burkholderia gladioli BSR3]
          Length = 229

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S +L  +L L     ++    +    +  LY  T LI G+P LVL+ L + 
Sbjct: 15  WQTVKLAVLSLILSFILGLLG-AGAKLSRNRVTNGIGTLY--TTLIRGVPDLVLMLLLFY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F +  + L     A+  E  R   ++VPRGQ+EA  A 
Sbjct: 72  SIQIWLNQLTDMMSWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGAAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +    V+ PQ MR  +P + + +  L+K+++L   +G AD+V         T + 
Sbjct: 132 GMSSWQVFTRVMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKASQDAGKGTLRF 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L+   IYL+++ +    +  L  + +   +K
Sbjct: 192 FFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRK 226



 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 37/82 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +I + I+G L    +LS N++   I  +Y  + R +P LV+
Sbjct: 6   YGPLILSGTWQTVKLAVLSLILSFILGLLGAGAKLSRNRVTNGIGTLYTTLIRGVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +  L+ S+   L      +   
Sbjct: 66  MLLLFYSIQIWLNQLTDMMSWD 87


>gi|332162245|ref|YP_004298822.1| arginine transporter permease subunit ArtQ [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318606308|emb|CBY27806.1| arginine ABC transporter, permease protein ArtQ [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666475|gb|ADZ43119.1| arginine transporter permease subunit ArtQ [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860380|emb|CBX70690.1| arginine transport system permease protein artQ [Yersinia
           enterocolitica W22703]
          Length = 238

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++       +R     +  TG     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLVLAMLFAVCESSRWKIVSYLTTGWVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNIDDFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSQVAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|83647882|ref|YP_436317.1| arginine/histidine ABC transporter permease [Hahella chejuensis
           KCTC 2396]
 gi|83635925|gb|ABC31892.1| ABC-type arginine/histidine transport system, permease component
           [Hahella chejuensis KCTC 2396]
          Length = 240

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 5/220 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             N   L +    +    ++   S ++G+V+++    L    +    K +   ++ T++ 
Sbjct: 14  IFNVGTLEYYWDGLTVTVQMVFLSLLIGLVIAIPLGILRTSKNPWINKPI---WLYTYMF 70

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y      P +   +      ++  F    +A    TAA+  EI+R  +
Sbjct: 71  RGTPLLIQLYLIYYGLPAVPGVK--DSFIWPLLANAFYPAMLAFILNTAAYTTEIIRGAI 128

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
              P+G++EAA A G++   + R ++LP A R  +P  +++ + +L  S++A  V   DL
Sbjct: 129 QQTPQGEIEAAKAYGMSWWLSMRRIILPNAFRRALPAYSNEVIFMLHASAIASVVTIIDL 188

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                 I ++     E       IYL L+  I     RL 
Sbjct: 189 TGAARYIYSKYYAPFEAFTFVALIYLCLTFTIIYIFKRLE 228



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
               G   T  + F  ++   +I   +G  R S N  +     +Y  +FR  P L+ ++ 
Sbjct: 22  YYWDGLTVTVQMVFLSLLIGLVIAIPLGILRTSKNPWINKPIWLYTYMFRGTPLLIQLYL 81

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +Y  + +V  + D  I            L+F   T     +I 
Sbjct: 82  IYYGLPAVPGVKDSFIWPLLANAFYPAMLAFILNTAAYTTEII 124


>gi|289167714|ref|YP_003445983.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           B6]
 gi|288907281|emb|CBJ22116.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           B6]
          Length = 227

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 9/236 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +T+  +  +     +LG+VL+       +    K    L  L
Sbjct: 1   MNFSFLPKYFPYFNYGAIVTILISICVVCLGTILGVVLAFV-----QRSRFKPLIWLANL 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F   G P +V I + + L        Q   +G        +   + +S  + A+I+
Sbjct: 56  YVWIF--RGTPMMVQIMIAFALMHINAPTIQVGILG--VDLSRLIPGILIISMNSGAYIS 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G+ AVP+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  
Sbjct: 112 ETVRAGINAVPKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLS 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A+G  +L +   T+   T   +  +L   F YL ++ ++ + +      +   +KK
Sbjct: 172 AIGVMELWNGAITVSATTYLPLTPLLFAAFYYLIMTSILTVTLKSFENYMGQGDKK 227



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++   +   TI+G ++   + S  K + W+  +YV +FR  P +V 
Sbjct: 9   YFPYFNYGAIVTILISICVVCLGTILGVVLAFVQRSRFKPLIWLANLYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 69  IMIAFALMHINAPTIQ 84


>gi|330807009|ref|YP_004351471.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375117|gb|AEA66467.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 231

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 3/188 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F         F +  
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNLMRALGEYFGKPDLALDAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    +++PQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGVALGLSKWRIFTRLIMPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  + Q     ++  F+YL L+++  + M+ L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIGVTVSKQPFTFYMVAAFMYLGLTVLAMIGMHLLER 220

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 221 RAARGFTR 228


>gi|288960700|ref|YP_003451040.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913008|dbj|BAI74496.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 219

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 13/197 (6%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+V+      L+R  + +   A+    I  F     P LV +   Y              
Sbjct: 35  GLVVGCMI-ALARLSNMRIATAVVTGVIEIF--RCTPVLVQLVWVYY---------ALPI 82

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G  +SP  ++ +I L+ Y A+F  EI+R G+I+V  GQ +A  ALG+   +    V+L
Sbjct: 83  LTGIELSPS-VAAFITLTLYGASFFGEIIRGGIISVDMGQWDAGRALGMRRHQLMGGVIL 141

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA R ++PPL +Q +  LKN+SL   +   DL+  G  I + + + +E   +   IY  
Sbjct: 142 PQAFRRMVPPLVNQTVLQLKNTSLLSVLAVPDLLYQGQLITSASYRPLETYTMIAVIYFI 201

Query: 377 LSIMIALFMNRLNAKIA 393
           +   +  F +RL A+++
Sbjct: 202 ILFPLTRFAHRLEARMS 218



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I VG + T            ++G ++   RLS  ++   +    +E+FR  P LV
Sbjct: 12  QYKGLIGVGVLYTLAFTIGTAASGLVVGCMIALARLSNMRIATAVVTGVIEIFRCTPVLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPF 167
            + ++Y ++  +  I     V  F
Sbjct: 72  QLVWVYYALPILTGIELSPSVAAF 95


>gi|260903453|ref|ZP_05911848.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AQ4037]
 gi|308110365|gb|EFO47905.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AQ4037]
          Length = 225

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   S V+G+ +S+    ++R+            +I  F   G P L
Sbjct: 10  FPVYFQGLWTTVWLVGISLVIGLCVSVPL-AIARNSTNYVLSLPSWGFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++     + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+SL+ +I     R   + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLTFIILWCFKRAEKRF 217



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 30/81 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
               G   T WL    ++    +   +   R S N +++     ++  FR  P LV ++ 
Sbjct: 12  VYFQGLWTTVWLVGISLVIGLCVSVPLAIARNSTNYVLSLPSWGFIYFFRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFG 168
           +Y  +    P+ D      + 
Sbjct: 72  IYYGMDQFFPVKDTLWEHAWF 92


>gi|311232933|gb|ADP85787.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 278

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 14/179 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +TG+ +  LY+ +  +   P LV + + Y              I          S  +AL
Sbjct: 110 RTGRLVARLYVES--VRNTPLLVQLFVTY------------FAIAPVFGLGRMASAVMAL 155

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +  A++AEI+R+G+ AVP+GQ EA+ +LG+        V+LPQA+R  +PPLT Q ++
Sbjct: 156 GVFEGAYMAEILRAGIAAVPQGQWEASRSLGMDEPGTYVQVILPQALRRALPPLTGQAVS 215

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+K+SSLA A+   +L     TII +T    E+ L+   IYL +++ ++     L  ++
Sbjct: 216 LVKDSSLASAIAIHELTMQAQTIIAETFLTFEVWLLTAAIYLCVTLSLSAVARLLERRM 274


>gi|42820805|emb|CAE02641.1| YckJ protein [Bacillus amyloliquefaciens FZB42]
          Length = 168

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 88/176 (50%), Gaps = 12/176 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +  +    + G P LV + + + L           F   +     F S  IA S    A+
Sbjct: 1   MFSVYVSAVRGTPLLVQLFIIFYL-----------FPTFNITLDPFPSAVIAFSLNVGAY 49

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI+R+ + +VP+GQ EA   +G+T+RK    V+LPQA R  IPPL++ +++L+K++SL
Sbjct: 50  ASEIIRASISSVPKGQWEAGYTIGMTYRKTLFRVILPQAFRVSIPPLSNTFISLIKDTSL 109

Query: 341 AVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A  +  A+L      I  Q   Q + I +   FIY  +  ++++  + +  ++   
Sbjct: 110 ASQILVAELFRKAQEIGAQNLDQILVIYIEAAFIYWIICFLLSIVQHVIERRLDRY 165


>gi|62179394|ref|YP_215811.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|62127027|gb|AAX64730.1| ABC superfamily (membrane), glutamine high-affinity transporter
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322713865|gb|EFZ05436.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 219

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAG-FARTFGGWFANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +++EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRSLEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 63/210 (30%), Gaps = 4/210 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G+    +IG   G  R         I  V++E+ R
Sbjct: 4   DWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++                + +     ++               F   
Sbjct: 64  GTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREA 123

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L L      RH          L  +    I  +      +L   +   +        
Sbjct: 124 GLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKD---TSLFIVIGVAELTRQGQEI 180

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G+  S E  S            ++ I+R
Sbjct: 181 IAGNFRSLEIWSAVAVFYLIITLVLSFILR 210


>gi|148546354|ref|YP_001266456.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|167035335|ref|YP_001670566.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|148510412|gb|ABQ77272.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|166861823|gb|ABZ00231.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 248

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      ++ + +LG VL +      R    +    +   Y+  F    +P
Sbjct: 24  WYITGLGWTIAIAITAWIIALLLGSVLGVM-----RTVPNRLVSGIATAYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +   +S+ I L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPEGLQEWFKQDLNPTTSALISVVICLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G +  +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMRMVEKKVAV 239



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A +  I A ++G+++G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWYITGLGWTIAIAITAWIIALLLGSVLGVMRTVPNRLVSGIATAYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQEWFKQD 103


>gi|71737589|ref|YP_273644.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558142|gb|AAZ37353.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 237

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 3/237 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L    F                 K+ V S  L I+L L     ++       +    
Sbjct: 1   MQNLGLSAFSLKGFGPLLLEGTWMTIKLAVLSLALSILLGLIGAS-AKLSSSALLRVPAQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y  T LI G+P LVL+ L +        +              F +  I L     A+ 
Sbjct: 60  IY--TTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYF 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++L 
Sbjct: 118 TETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALV 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G ADLV         T Q    +++   IYL ++      +       A   ++
Sbjct: 178 SIIGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITSASNFALRWAERHYAAGSRE 234



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +  + +LS++ L+    ++Y  + R IP LV+
Sbjct: 14  FGPLLLEGTWMTIKLAVLSLALSILLGLIGASAKLSSSALLRVPAQIYTTLIRGIPDLVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 74  MLLIFYSLQTWLTMLTDAMEWEY 96


>gi|227114002|ref|ZP_03827658.1| putative amino-acid transport system permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
 gi|253686636|ref|YP_003015826.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753214|gb|ACT11290.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 221

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           + P+   + +   S  +  +     + + SF+ G+ L +    L R +  K  K L   Y
Sbjct: 1   MPPWLQLMADSFWSLLSAGLKFTVPLAILSFIFGLALGIII-ALVRLYGPKPLKWLGDFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  +    A+ +E
Sbjct: 60  V--WVIRGTPLLVQLFLIFY-----------GLPSAGITLDAFPAALIGFTISVGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  +++VP+GQ  AA +LG+  R+A R V+ PQ++   +PPL++ +++L+K++SLA  
Sbjct: 107 IVRGAILSVPKGQWNAAYSLGMNGRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I++ T + + + +    IYL  S +++    +L      
Sbjct: 167 ITVPEMFLSAQRIVSVTYEPLILYVEAALIYLMFSTVLSQLQVKLEKYYQR 217



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+ + +  G   T  LA    I    +G ++   RL   K + W+   YV V R  P 
Sbjct: 9   ADSFWSLLSAGLKFTVPLAILSFIFGLALGIIIALVRLYGPKPLKWLGDFYVWVIRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S     D       G  ++
Sbjct: 69  LVQLFLIFYGLPSAGITLDAFPAALIGFTIS 99


>gi|218691564|ref|YP_002399776.1| amino-acid ABC transporter membrane protein [Escherichia coli ED1a]
 gi|218429128|emb|CAR10071.2| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
          Length = 367

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 77/333 (23%), Positives = 134/333 (40%), Gaps = 54/333 (16%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFIYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              G + E  +    IY      ++ +   L  
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEK 358


>gi|163815177|ref|ZP_02206558.1| hypothetical protein COPEUT_01335 [Coprococcus eutactus ATCC 27759]
 gi|158449586|gb|EDP26581.1| hypothetical protein COPEUT_01335 [Coprococcus eutactus ATCC 27759]
          Length = 236

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 92/185 (49%), Gaps = 12/185 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +   A+  +Y+  F   G P +V + L Y +            +GG           +  
Sbjct: 63  RVLDAICSVYVGFF--RGTPMVVQLLLFYYV--------LLPIVGG--HMTGVQVAMLVF 110

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              + A+I+EI+R G+++V  GQME   A+GL+       +++PQA+++I+P L +++++
Sbjct: 111 GLNSGAYISEIMRGGILSVDPGQMEGGRAMGLSFSTTMLKIVIPQAVKNILPTLGNEFIS 170

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K +S+   VG  DL      I + + + +   L+   IY+ + ++I+L +  +   + 
Sbjct: 171 LIKETSVVSFVGATDLYVAFNYIGSNSYEFMVPYLVMALIYIVMVLLISLGIKLMERSLR 230

Query: 394 LKEKK 398
             +++
Sbjct: 231 KSDRR 235


>gi|320177113|gb|EFW52129.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella dysenteriae CDC 74-1112]
          Length = 367

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQ ++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQVLKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNAGR 364


>gi|311280247|ref|YP_003942478.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749442|gb|ADO49194.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 238

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 8/221 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLI 238
                 V   VL ++ +++ +   R             + LP + +  F+ FG   L+L+
Sbjct: 17  LAVCALVIGLVLAMIFAVWESAKWRPVAWIGSAWVTILRGLPEILVVLFIYFGSSQLLLL 76

Query: 239 AL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
               + L+     +     I    VSP F+   IALS   +A+ ++ +R  L AVP GQ 
Sbjct: 77  LSDGFTLNLGIVKIPVQMQIENFDVSP-FLCGVIALSLLYSAYASQTLRGALKAVPIGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I 
Sbjct: 136 ESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 196 TRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|300703461|ref|YP_003745063.1| amino acid transmembrane ABC transporter protein [Ralstonia
           solanacearum CFBP2957]
 gi|299071124|emb|CBJ42436.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum CFBP2957]
          Length = 231

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 21/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HF 211
           +P   + +      +   ++   L++  +   FV +  LGIV++L     S         
Sbjct: 1   MPHFDLSMLLSGQYHQWLVNGFLLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQA 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + +  + +PLL    F  FG P L+  A++  L+                ++ E  S  I
Sbjct: 61  YVEAIRNVPLLAHMLFWYFGAPQLLPNAIRTWLY---------------DLNYEAASAVI 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA++AE +RSGL ++P+ Q+EA+ ALGL+  +A R V+LPQ++R  +PPL SQ 
Sbjct: 106 ALVLYTAAYMAEDIRSGLRSIPKEQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQT 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL KNSS+A+ +G A+L+     + + T +  E        YL++SI I +F      +
Sbjct: 166 LNLWKNSSIAMVIGVAELMYEAQQVESATFRGFEAFAFATAAYLTISIAITVFSAWYQHR 225

Query: 392 IALK 395
             ++
Sbjct: 226 YPVR 229



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 38/85 (44%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GF+ +  L+    + A  +G +V   R++ +  +  I + YVE  RN+P 
Sbjct: 11  SGQYHQWLVNGFLLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQAYVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           L  + F Y     +LP    + +  
Sbjct: 71  LAHMLFWYFGAPQLLPNAIRTWLYD 95


>gi|229056416|ref|ZP_04195829.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
 gi|228720890|gb|EEL72439.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
          Length = 206

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 118/220 (53%), Gaps = 18/220 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+ ++    + SF+LG++L++      R           L +I +  +  + 
Sbjct: 1   MYLEGFKYTVMSSVIALIGSFILGVILAVMRISPIRI----------LNWIGSAFVEFVR 50

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + L+ + +  +F  PV+              F++  + L+ YTA+FIAE++R+G+++V 
Sbjct: 51  NIPLVLIAFIFYFALPVI--------GITLNGFVAGTVTLTVYTASFIAEVIRAGILSVA 102

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA + GLT+ +    V+LPQAM+ +IPPL +Q+LNL+KNSS+   +   DL+  G
Sbjct: 103 KGQMEAARSSGLTYVQGMYYVVLPQAMKIVIPPLGNQFLNLVKNSSILGIIAGTDLMYQG 162

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +T    ++ +     YL L++ +++ +  L  ++A
Sbjct: 163 DLISTKTLVTFDVYIFVGMFYLILTLPLSMLVRYLEKRLA 202



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+G ++   R+S  +++ WI   +VE  RNIP +++ F  
Sbjct: 2   YLEGFKYTVMSSVIALIGSFILGVILAVMRISPIRILNWIGSAFVEFVRNIPLVLIAFIF 61

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 62  YFALP 66


>gi|28871314|ref|NP_793933.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28854565|gb|AAO57628.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|330966687|gb|EGH66947.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331015652|gb|EGH95708.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 248

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +   Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRL-----VSGIATAYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPADLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATAYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPADLQEWYKQD 103


>gi|311695923|gb|ADP98796.1| amino acid ABC transporter, inner membrane subunit [marine
           bacterium HP15]
          Length = 247

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 8/212 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++   S  L + L L     ++    +  K +   Y  T LI G+P LV++ L Y  
Sbjct: 30  VTIELAFLSLALSVALGLIGAS-AKLSQSRVAKGIATTY--TTLIRGVPDLVMMLLFYYG 86

Query: 244 ----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               ++     + +   I        F+S  + +     A++ E  R   +AV  GQ+EA
Sbjct: 87  GQVAVNMLSDYIWEAYEIDFFFQFDPFISGVVTIGLIFGAYMTETFRGAFLAVETGQIEA 146

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A G T     R ++LPQ MR  +P L + +  LLK ++L   +G  D+V V       
Sbjct: 147 ARAYGFTRFHTFRRIMLPQMMRHALPGLGNNWQVLLKTTALVSIIGLTDMVRVAEEAAKA 206

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                   +   F+YL+L+    LF+  L+ +
Sbjct: 207 ERMPFHFFIPVAFVYLALTAGSELFIKWLDKR 238


>gi|300898042|ref|ZP_07116413.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300358261|gb|EFJ74131.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
          Length = 347

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPNRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|213417551|ref|ZP_03350693.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 177

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 224 ISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +  F+ FG   L+L ++  + LH     +     I    VSP F+   IALS   AA+ +
Sbjct: 1   MVLFIYFGSSQLLLTLSDGFTLHLGFTQIPVQMEIENFDVSP-FLCGVIALSLLYAAYAS 59

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           + +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L  
Sbjct: 60  QTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS 119

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   DL+    +I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 120 LISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRFERR 175


>gi|152981390|ref|YP_001351970.1| glutamate/aspartate ABC type transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|151281467|gb|ABR89877.1| glutamate/aspartate ABC type transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 243

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 7/224 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                LS    T+      ++F+FV+G ++ +      R   ++    L   Y+  F   
Sbjct: 17  WLESLLSGLGWTLAVALFAWIFAFVVGSIVGV-----GRTSEKRWLVRLGGAYVELF--R 69

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P LV   + Y +        +   I       +F++  + L  +T++ IAE VRSG+ 
Sbjct: 70  NIPLLVQFFVWYFVVPGLVPAVKAWVITLDPTEHQFVTAVVCLGFFTSSRIAEQVRSGIQ 129

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PRGQ  A  ALGLT  +  R VLLP A R IIPPLTS+ +NL+KN+++A ++G  +L 
Sbjct: 130 ALPRGQRNAGYALGLTTAQTYRYVLLPMAYRIIIPPLTSELMNLIKNTAVAYSIGLVELF 189

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                +   T +  E       IY+ +++     M  +  ++A+
Sbjct: 190 FRTREMGEMTFRYFEAFGAATLIYVVIAMTANRLMALVERRLAV 233



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 44/94 (46%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
             D ++  ++L G   T  +A    I A ++G++VG GR S  + +  +   YVE+FRNI
Sbjct: 12  DGDGTWLESLLSGLGWTLAVALFAWIFAFVVGSIVGVGRTSEKRWLVRLGGAYVELFRNI 71

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           P LV  F  Y  V  ++P     ++         
Sbjct: 72  PLLVQFFVWYFVVPGLVPAVKAWVITLDPTEHQF 105


>gi|270293188|ref|ZP_06199399.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279167|gb|EFA25013.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 225

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L IVL +F   LS   H+   + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAIVLGIFFGVLSTSKHQ-ILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++ +      + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLISE-----HTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMER 217



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   G    S ++++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAIVLGIFFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISEHTIMIPIYW 94


>gi|270293060|ref|ZP_06199271.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279039|gb|EFA24885.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 227

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +     G +L +     ++    K       +Y+  F   G 
Sbjct: 7   PKYLPYFNYGALITVVISILVVFFGTILGVLL-AFAQRSRFKPLVWFANVYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHIDAPTIQVGILG--VDLSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL   +G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSTIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      I   +KK
Sbjct: 182 ATTVATTTYLPLTPLLFAAFYYLIMTSVLTVALKAFENYIGQGDKK 227



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++   +   TI+G L+   + S  K + W   VYV +FR  P +V 
Sbjct: 9   YLPYFNYGALITVVISILVVFFGTILGVLLAFAQRSRFKPLVWFANVYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSV 152
           I   +  +
Sbjct: 69  IMIAFALM 76


>gi|146310955|ref|YP_001176029.1| glutamine ABC transporter permease protein [Enterobacter sp. 638]
 gi|145317831|gb|ABP59978.1| L-glutamine ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 219

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+++ L A   +R +       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLIIGLVAG-FARSYGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFSEAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      +YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVVYLIITLLLSFVLRRLERRMKI 218


>gi|53718672|ref|YP_107658.1| histidine transport system permease [Burkholderia pseudomallei
           K96243]
 gi|76809678|ref|YP_332658.1| histidine transport system permease [Burkholderia pseudomallei
           1710b]
 gi|126439463|ref|YP_001058139.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 668]
 gi|126455408|ref|YP_001065374.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106a]
 gi|134281279|ref|ZP_01767988.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 305]
 gi|167718615|ref|ZP_02401851.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei DM98]
 gi|167737643|ref|ZP_02410417.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 14]
 gi|167814778|ref|ZP_02446458.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 91]
 gi|167823232|ref|ZP_02454703.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 9]
 gi|167851714|ref|ZP_02477222.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei B7210]
 gi|167900311|ref|ZP_02487712.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 7894]
 gi|167908463|ref|ZP_02495668.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei NCTC 13177]
 gi|167916791|ref|ZP_02503882.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 112]
 gi|167918057|ref|ZP_02505148.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei BCC215]
 gi|217420034|ref|ZP_03451540.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 576]
 gi|226194409|ref|ZP_03790007.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pakistan 9]
 gi|237811358|ref|YP_002895809.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242315876|ref|ZP_04814892.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106b]
 gi|254181369|ref|ZP_04887966.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1655]
 gi|254190769|ref|ZP_04897276.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196202|ref|ZP_04902626.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei S13]
 gi|254258583|ref|ZP_04949637.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1710a]
 gi|254298304|ref|ZP_04965756.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 406e]
 gi|52209086|emb|CAH35027.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|76579131|gb|ABA48606.1| histidine transport system permease protein [Burkholderia
           pseudomallei 1710b]
 gi|126218956|gb|ABN82462.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 668]
 gi|126229050|gb|ABN92590.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106a]
 gi|134247585|gb|EBA47670.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 305]
 gi|157808176|gb|EDO85346.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 406e]
 gi|157938444|gb|EDO94114.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169652945|gb|EDS85638.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei S13]
 gi|184211907|gb|EDU08950.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1655]
 gi|217397338|gb|EEC37354.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 576]
 gi|225933494|gb|EEH29483.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pakistan 9]
 gi|237503472|gb|ACQ95790.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242139115|gb|EES25517.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106b]
 gi|254217272|gb|EET06656.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1710a]
          Length = 229

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        LS    T+         SF+LG+V +      ++    +    +  LY  
Sbjct: 1   MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGA-----AAKLSRNRVSNGIGTLY-- 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T LI G+P LVL+ L +                       F +  + L     A+  E  
Sbjct: 54  TTLIRGVPDLVLMLLLFYSLQIWLNQLTDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   ++VPRGQ+EA  A G+T+ +    V+ PQ MR  +P + + +  L+K+++L   +G
Sbjct: 114 RGAFLSVPRGQLEAGSAYGMTNWQVFARVMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            AD+V         T +     L+   IYL+++ +    +  L  + +   +K
Sbjct: 174 LADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRK 226



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 37/82 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +  + ++G +  A +LS N++   I  +Y  + R +P LV+
Sbjct: 6   YGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRVSNGIGTLYTTLIRGVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +  L+ S+   L      +   
Sbjct: 66  MLLLFYSLQIWLNQLTDLMNWD 87


>gi|50123114|ref|YP_052281.1| amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613640|emb|CAG77091.1| probable amino-acid ABC transporter permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 223

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 118/234 (50%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L + + +  + L +   T+        F+ VLG++L+L      R         +  LYI
Sbjct: 5   LAYLLKVFPQVLMYLPTTLFLAVVSMFFAMVLGLILALV-----RESKIVVVVKIVELYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+P+LV + + Y   F  P L       G +      +  I  S  T+A++AEI
Sbjct: 60  SLF--RGIPSLVQLFIIY---FGLPQL-----FPGLSNLDAMTAAIIGFSLKTSAYMAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL +V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+
Sbjct: 110 FRAGLASVDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ++L + G  I  ++ +  E  L+   IY  + ++ A    +L  K+    ++
Sbjct: 170 GVSELFAEGKMIAAESLRFFETFLVVGLIYWMVIVVYAWLQKQLEKKLNHSLQR 223



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T +LA   M  A ++G ++   R S   +V  I  +Y+ +FR IP LV +F +Y  +
Sbjct: 19  LPTTLFLAVVSMFFAMVLGLILALVRESKIVVVVKIVELYISLFRGIPSLVQLFIIYFGL 78

Query: 153 LSVLP 157
             + P
Sbjct: 79  PQLFP 83


>gi|326790343|ref|YP_004308164.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326541107|gb|ADZ82966.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 240

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 18/229 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                    +  L   ++T+  +    + + +LG++  +           K  K +  +Y
Sbjct: 9   WWMDLFEEFDLYLQGFSMTLRVSIVGLLVAIMLGVLFGVLY-----STKRKPLKLIARVY 63

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F     P ++ I   Y              IGG     +F+   + +  Y  A++AE
Sbjct: 64  IEIF--QNTPLVIQIFFYYS--------CLPYLIGGRV--DKFLLGVMGVGIYHGAYVAE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R+G+ AVP+GQ+EAA + G ++ +A R ++LPQ ++ I+PPL +Q LNL+KN+S+   
Sbjct: 112 VIRTGIEAVPKGQLEAANSQGFSYIQAMRYIILPQTIKIIMPPLANQALNLVKNTSVLAM 171

Query: 344 VGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           V   DL+    +  + + G   +  L+   +Y  +   +A     L  K
Sbjct: 172 VAGLDLMYFADSWASSSGGHYTQGYLVCAAMYFVICFPLASLARYLERK 220



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T  ++  G++ A ++G L G    +  K +  I RVY+E+F+N P ++ IFF 
Sbjct: 20  YLQGFSMTLRVSIVGLLVAIMLGVLFGVLYSTKRKPLKLIARVYIEIFQNTPLVIQIFFY 79

Query: 149 YKSVL 153
           Y  + 
Sbjct: 80  YSCLP 84


>gi|55821629|ref|YP_140071.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55737614|gb|AAV61256.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
          Length = 323

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 114/294 (38%), Gaps = 15/294 (5%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
                I+G +  A  ++    ++W+  +           + +  +    +S         
Sbjct: 29  WYLQVILGLVGLAVAVALAIPLSWLVEILWGYV------LQLVTIVFKWISSWMPAGKLF 82

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                     + +    LT+        F  +L +V ++      R  +       P+  
Sbjct: 83  SWKAVFDAVPKIVERLPLTLGLTIAGAFFGLILALVFAVVKINRVRILY-------PIQA 135

Query: 224 ISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +    + G P LV + L Y     F + + G+F         P  +    A +   AA++
Sbjct: 136 VFVSFLRGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYM 195

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA
Sbjct: 196 SETIRAAIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLA 255

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + G  ++ +    +     +  E  +    +Y ++SI+I      +   +A+K
Sbjct: 256 FSAGIVEMYAQAQILGGADYRYFERYISVALVYWAISILIEYIGRSVENHMAIK 309


>gi|209516019|ref|ZP_03264879.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503479|gb|EEA03475.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 229

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ VFS  L  VL L     ++    +    +  +Y  T L+ G+P LVL+ L + 
Sbjct: 15  WQTVKLAVFSLALAFVLGLLGAA-AKLSKNRLSNGIGTVY--TTLVRGVPDLVLMLLLFY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F         F++    L     A+  E  R   IAVPRGQ+EA  A 
Sbjct: 72  SIQIWLNNLTDAFGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFIAVPRGQLEAGAAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +    V+ PQ MR  +P + + +  ++K ++L   +G AD+V         T + 
Sbjct: 132 GMTGWQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVKASQDAGKGTLRF 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L+   IYL ++ +    +  L  + +   +K
Sbjct: 192 FFFTLLAGAIYLVITTLSNFVLMYLEKRYSTGVRK 226



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  LA   +  A ++G L  A +LS N+L   I  VY  + R +P LV+
Sbjct: 6   YGPLLLSGTWQTVKLAVFSLALAFVLGLLGAAAKLSKNRLSNGIGTVYTTLVRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|170741792|ref|YP_001770447.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196066|gb|ACA18013.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 220

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 15/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             V  FG+    R L    L +       + +  L + L      LSR       + L L
Sbjct: 1   MYVWDFGVLWGYRWLLLNGLAVTVAFTAGIVALGLAVGLVGGLASLSRL---ALVRGLVL 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++  F     P LV +      ++  P+L                +  +ALSCY  +F 
Sbjct: 58  GFVEIF--RCTPVLVQLI---WFYYALPILTGLE-------MSPVTASLLALSCYGGSFY 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R+G++++  GQ EA  ALG+T  +  R ++LPQA R ++PPL +Q +  LKN+SL 
Sbjct: 106 AEIIRAGIVSIDAGQGEAGAALGMTPGQTMRRIILPQAFRRMVPPLMNQSIIQLKNTSLV 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   DLV       + + + +E        Y  +   + + +     ++ 
Sbjct: 166 SVLAVPDLVYQAQVAAHDSYRPLETYTAVAVAYFVILFPLTVLVRIGERRLG 217



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   +L G   T       +     +G + G   LS   LV  +   +VE+FR  P L
Sbjct: 10  WGYRWLLLNGLAVTVAFTAGIVALGLAVGLVGGLASLSRLALVRGLVLGFVEIFRCTPVL 69

Query: 143 VVIFFLYKSVL 153
           V + + Y ++ 
Sbjct: 70  VQLIWFYYALP 80


>gi|116513634|ref|YP_812540.1| ABC-type amino acid transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092949|gb|ABJ58102.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|325125284|gb|ADY84614.1| Glutamine ABC transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus 2038]
          Length = 213

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 100/201 (49%), Gaps = 2/201 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLL--YISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+LG   ++  + +S  F    G    +L    S F        V I L   L     V
Sbjct: 11  TFLLGFWNTILCSLISLFFSLIIGSGFAILETVPSKFWRGVAKVYVQIFLNIPLLVVTMV 70

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                          F +  I LS Y++AFIAE VRSG+ +V  GQME A + G+T+ +A
Sbjct: 71  FYLVLPTYTPLKLTGFQAGTIGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQA 130

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA R +IP L +Q++NL+KNSS+   V   DL+  G  + + T Q I   ++ 
Sbjct: 131 MRYVILPQAFRIVIPSLGNQFVNLIKNSSILAFVAGFDLMYQGDIVASNTFQTIPSYVLV 190

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
              YL L++ ++ +M  L  K
Sbjct: 191 SLFYLVLTLPLSYYMQYLEKK 211



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            +  L+GF NT   +   +  + IIG+         +K    + +VYV++F NIP LVV 
Sbjct: 9   WSTFLLGFWNTILCSLISLFFSLIIGSGFAILETVPSKFWRGVAKVYVQIFLNIPLLVVT 68

Query: 146 FFLYKSVLSVLP 157
              Y  + +  P
Sbjct: 69  MVFYLVLPTYTP 80


>gi|323489869|ref|ZP_08095093.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
 gi|323396504|gb|EGA89326.1| polar amino acid ABC transporter, inner membrane subunit
           [Planococcus donghaensis MPA1U2]
          Length = 214

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 13/227 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M        +    +     IF  + VLG ++ L    L R    K    +  +++    
Sbjct: 1   MDTIINAFPYLMEGLKVTLYIFAIAIVLGFLIGLIV-ALFRLAPLKILNWIAKIFVDA-- 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P +V +   Y        L    FI          +  + ++    A+ +EI+R+G
Sbjct: 58  IRGTPFIVQLFFIYF------GLNSLAFISLDNT----TAGIVTVAINAGAYFSEIIRAG 107

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ +GQ EAA +LGL   +  R ++LPQA R ++P +T+Q +  LK++SL   +G AD
Sbjct: 108 IQSIDKGQTEAARSLGLNSTQNMRYIVLPQAFRRMLPTITNQAIISLKDTSLLSVIGVAD 167

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   G    + T  A  + LI   IY  +  ++++  N +  K  L+
Sbjct: 168 LTQEGRIQASATFDAFNVYLILGIIYFVVIYLLSMLANYVERKFVLR 214



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 36/65 (55%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T ++    ++   +IG +V   RL+  K++ WI +++V+  R  P +V +FF
Sbjct: 10  YLMEGLKVTLYIFAIAIVLGFLIGLIVALFRLAPLKILNWIAKIFVDAIRGTPFIVQLFF 69

Query: 148 LYKSV 152
           +Y  +
Sbjct: 70  IYFGL 74


>gi|257438672|ref|ZP_05614427.1| L-cystine ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
 gi|257198901|gb|EEU97185.1| L-cystine ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
          Length = 227

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF L +V+++ A  L ++ +    + +   YI  ++I G P LV + + +  
Sbjct: 28  MTIPLTLISFSLAMVIAV-AVALVQYANVPVLRQIARFYI--WVIRGTPLLVQLFIIFY- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                            +   F +  IA +    A+ AE +R  L +VP+GQ+EA   +G
Sbjct: 84  ----------GLPSLGIMLDAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAGSCVG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++LPQA+R+ +P L++  ++++K++SLA  +  A+L   G  +  +T   +
Sbjct: 134 MTWWQIMRRIVLPQALRTAVPSLSNSLISMIKDTSLASNITVAELFMAGQRVAARTYIFL 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I      +YL    +I      +  ++
Sbjct: 194 PIYCEVAVVYLLFCTIITKLQALVERQL 221



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 34/101 (33%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  G   T  L       A +I   V   + +   ++  I R Y+ V R  P LV +F
Sbjct: 20  RILTAGLTMTIPLTLISFSLAMVIAVAVALVQYANVPVLRQIARFYIWVIRGTPLLVQLF 79

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            ++  + S+  + D           N       T+     +
Sbjct: 80  IIFYGLPSLGIMLDAFPAAVIAFAFNEGAYCAETMRGALES 120


>gi|91788992|ref|YP_549944.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698217|gb|ABE45046.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 222

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 88/220 (40%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            + V S   G ++  F   ++R            LY+S   + G P L
Sbjct: 14  LPLMLKGAAWTLLLAVASVFFGAIIGTFV-AITRLAKMPGLARFAALYVS--CMRGTPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y           F             +  + LS    A+++E +R  +  V  G
Sbjct: 71  VQLFVIY-----------FGLPSIGIQFDPITAGILGLSLNVGAYLSETIRGAINGVEHG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA +LGLT  +  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     
Sbjct: 120 QWNAARSLGLTQAQTLRHVIGPQALRLAVPSLSNSLISLIKDTSLVSVIAVGELMLATKE 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +I  T Q   + L    IY ++S        +L  ++   
Sbjct: 180 VIATTFQPFPLYLAAAAIYWAMSASFETLQKKLEVRLNRS 219



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA + +    IIGT V   RL+    +A    +YV   R  P LV +F +
Sbjct: 17  MLKGAAWTLLLAVASVFFGAIIGTFVAITRLAKMPGLARFAALYVSCMRGTPLLVQLFVI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  + S+    D       G+ LN
Sbjct: 77  YFGLPSIGIQFDPITAGILGLSLN 100


>gi|291561989|emb|CBL40800.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SS3/4]
          Length = 236

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 98/212 (46%), Gaps = 12/212 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +   ++G +++            +   A+   Y+  F   G P +V + + Y +  
Sbjct: 36  VVGMLIGVLIGTIIATVRVLPKYKTLPRALNAVCSFYVGLF--RGTPMVVQLLIFYYVML 93

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +            P      +     + A+I+EI+RSG+ +V  GQ+EA  A+GL 
Sbjct: 94  PLMGIKL----------PGVRVAMVVFGLNSGAYISEIMRSGIQSVDPGQLEAGRAVGLG 143

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              A   +++PQA+++I+P L ++++ L+K +S+   VG ADL      I + + + +  
Sbjct: 144 FGPAMIRIVIPQAVKNILPTLGNEFIALIKETSVVSFVGAADLYVAFNYIGSNSYEFMVP 203

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L+   IY+ L ++I++ +  +   +   +++
Sbjct: 204 YLVMAAIYIVLVLVISILVKLMERSLKKSDRR 235



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 6/192 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRNIPPLVV 144
           + G  NT  +A  GM+   +IGT++   R+        + +  +C  YV +FR  P +V 
Sbjct: 25  VQGLQNTLLIAVVGMLIGVLIGTIIATVRVLPKYKTLPRALNAVCSFYVGLFRGTPMVVQ 84

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-F 203
           +   Y  +L ++ I    + +   +F  N G     +       +       G  + L F
Sbjct: 85  LLIFYYVMLPLMGIKLPGVRVAMVVFGLNSGAYISEIMRSGIQSVDPGQLEAGRAVGLGF 144

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              + R    +  K +     + F+     T V+  +     +        N        
Sbjct: 145 GPAMIRIVIPQAVKNILPTLGNEFIALIKETSVVSFVGAADLYVAFNYIGSNSYEFMVPY 204

Query: 264 PEFMSLYIALSC 275
               ++YI L  
Sbjct: 205 LVMAAIYIVLVL 216


>gi|254508516|ref|ZP_05120634.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio parahaemolyticus 16]
 gi|219548541|gb|EED25548.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio parahaemolyticus 16]
          Length = 225

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   + V+G+V+++    ++R+            +I  F   G P L
Sbjct: 10  LPVYLEGLWTTVWLVCLALVIGLVVAIPLG-VARNSQSYFISGPSWAFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  IQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++H    R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSHFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFIILWCFKHAEKRF 217



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 37/103 (35%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++   ++   +G  R S +  ++     ++  FR  P L+ ++ 
Sbjct: 12  VYLEGLWTTVWLVCLALVIGLVVAIPLGVARNSQSYFISGPSWAFIYFFRGTPLLIQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +Y  +    P+ D      +   L    L+    T +      
Sbjct: 72  IYYGMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAI 114


>gi|83720821|ref|YP_441445.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|257139879|ref|ZP_05588141.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83654646|gb|ABC38709.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 229

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        LS    T+         SF+LG+V +      ++    +    +  LY  
Sbjct: 1   MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGA-----AAKLSRNRISNGIGTLY-- 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T LI G+P LVL+ L +                       F +  + L     A+  E  
Sbjct: 54  TTLIRGVPDLVLMLLLFYSLQIWLNQFTDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   ++VPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  L+K+++L   +G
Sbjct: 114 RGAFLSVPRGQLEAGSAYGMTDWQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            AD+V         T +     L+   IYL+++ +    +  L  + +   +K
Sbjct: 174 LADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRK 226



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +  + ++G +  A +LS N++   I  +Y  + R +P LV+
Sbjct: 6   YGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRISNGIGTLYTTLIRGVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +  L+ S+           +  F   +N   +             F++ 
Sbjct: 66  MLLLFYSL--------QIWLNQFTDLMNWDQIDIDPFAAGVLVLGFIYG 106


>gi|16759747|ref|NP_455364.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16764191|ref|NP_459806.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|29142480|ref|NP_805822.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56414071|ref|YP_151146.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161614919|ref|YP_001588884.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167550478|ref|ZP_02344235.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992065|ref|ZP_02573163.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230731|ref|ZP_02655789.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168236761|ref|ZP_02661819.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168240697|ref|ZP_02665629.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168263668|ref|ZP_02685641.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466430|ref|ZP_02700292.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|168820021|ref|ZP_02832021.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194445368|ref|YP_002040065.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194448838|ref|YP_002044857.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194468570|ref|ZP_03074554.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737623|ref|YP_002113920.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197249080|ref|YP_002145785.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264015|ref|ZP_03164089.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197362994|ref|YP_002142631.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198242595|ref|YP_002214792.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389501|ref|ZP_03216112.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204929959|ref|ZP_03220980.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205352085|ref|YP_002225886.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856265|ref|YP_002242916.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213163838|ref|ZP_03349548.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213424778|ref|ZP_03357528.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213583835|ref|ZP_03365661.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213622114|ref|ZP_03374897.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213649898|ref|ZP_03379951.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|224582640|ref|YP_002636438.1| glutamine ABC transporter permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238913895|ref|ZP_04657732.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289809887|ref|ZP_06540516.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
 gi|289823691|ref|ZP_06543303.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25296621|pir||AB0601 glutamine transport system permease protein GlnP STY0867 [imported]
           - Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16419335|gb|AAL19765.1| glutamine high-affinity transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16502040|emb|CAD05276.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138111|gb|AAO69682.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56128328|gb|AAV77834.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|161364283|gb|ABX68051.1| hypothetical protein SPAB_02673 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404031|gb|ACF64253.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194407142|gb|ACF67361.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194454934|gb|EDX43773.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194713125|gb|ACF92346.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|195631095|gb|EDX49681.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|197094471|emb|CAR59988.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|197212783|gb|ACH50180.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197242270|gb|EDY24890.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197290199|gb|EDY29556.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197937111|gb|ACH74444.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|199601946|gb|EDZ00492.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|204320953|gb|EDZ06154.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|205271866|emb|CAR36702.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205324488|gb|EDZ12327.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329674|gb|EDZ16438.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334880|gb|EDZ21644.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339925|gb|EDZ26689.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205343078|gb|EDZ29842.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205347825|gb|EDZ34456.1| glutamine ABC transporter, permease protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708068|emb|CAR32359.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467167|gb|ACN44997.1| glutamine ABC transporter permease component [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|261246086|emb|CBG23888.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992575|gb|ACY87460.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157413|emb|CBW16902.1| glutamine transport system permease protein GlnP [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312911852|dbj|BAJ35826.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|320085102|emb|CBY94889.1| L-cystine transport system permease protein tcyB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321226402|gb|EFX51453.1| Glutamate transport membrane-spanning protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323129135|gb|ADX16565.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622545|gb|EGE28890.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326627127|gb|EGE33470.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 219

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAG-FARTFGGWFANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G+    +IG   G  R         I  V++E+ R
Sbjct: 4   DWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|320535581|ref|ZP_08035678.1| ABC transporter, permease protein [Treponema phagedenis F0421]
 gi|320147544|gb|EFW39063.1| ABC transporter, permease protein [Treponema phagedenis F0421]
          Length = 270

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 19/275 (6%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           + FR +   +  + +  S L +  +    +   +               + T   + + +
Sbjct: 4   KSFRQVAGGIPWWLVIISFLGLYFLVAALVNESY-----RSIFFAVASGLITTLLVAIVA 58

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------- 245
           ++L I   L    L+R  H +  K L  +YI   L+ GLP LV++     +         
Sbjct: 59  YILSIFFGLLLG-LARASHIRWLKELVTVYIE--LVRGLPMLVILYYIAFVAVPAISSVL 115

Query: 246 ---FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F   +  +             +   IAL    +AFIAEI R+G+ +V +GQ+EAA A
Sbjct: 116 NAVFAPLINAEIMEGFSPRSFSFALLAIIALVLGYSAFIAEIFRAGIESVDKGQVEAASA 175

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGLT  +    ++LPQA R+I+P L ++++ ++K+SSL   +G  D+  +G    + T  
Sbjct: 176 LGLTKTQTMIHIILPQATRNILPALANEFIAVIKDSSLVSVLGVQDITQIGKVYSSATFL 235

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             E   +  F YL L+I +++ + RL  K+   ++
Sbjct: 236 FFETYNVVAFFYLCLTISLSIAVRRLERKLKKGKR 270



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   A+  G + T  +A    I +   G L+G  R S  + +  +  VY+E+ R +P LV
Sbjct: 39  SIFFAVASGLITTLLVAIVAYILSIFFGLLLGLARASHIRWLKELVTVYIELVRGLPMLV 98

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           +++++    +   P     +   F   +N   +   +    + A + + + VLG
Sbjct: 99  ILYYIAFVAV---PAISSVLNAVFAPLINAEIMEGFSPRSFSFALLAIIALVLG 149


>gi|149376081|ref|ZP_01893847.1| ABC-type arginine transport system, permease component
           [Marinobacter algicola DG893]
 gi|149359718|gb|EDM48176.1| ABC-type arginine transport system, permease component
           [Marinobacter algicola DG893]
          Length = 234

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 8/212 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++  FS  L +VL L     ++    +    +   Y  T LI G+P LV++ L Y  
Sbjct: 17  VTIELAFFSLALALVLGLIGAS-AKLSKSRVAIGIATTY--TTLIRGVPDLVMMLLFYYG 73

Query: 245 HFDK-----PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                      L     I        F+S  I +     A++AE  R   +AV  GQ+EA
Sbjct: 74  GQVAVNNLSDYLYDAYDIDFFFQFDPFISGVITIGLIFGAYMAETFRGAFLAVESGQIEA 133

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A G +  +    ++LPQ +R  +P + + +  LLK ++L   +G  D+V V       
Sbjct: 134 ARAYGFSRWRTFHRIILPQMLRHALPGIGNNWQVLLKTTALVSIIGLTDMVRVAEEAAKA 193

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                   +   F+YLSL+    LF+  LN +
Sbjct: 194 ERMPFHFFIPVAFVYLSLTAGSELFIKWLNKR 225


>gi|150403485|ref|YP_001330779.1| polar amino acid ABC transporter inner membrane subunit
           [Methanococcus maripaludis C7]
 gi|150034515|gb|ABR66628.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C7]
          Length = 219

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            ++    + F    +    KI + SF+L +V+++    +      KT   + + YI  F 
Sbjct: 3   FYIVYNNIPFIIDAVFVTLKITIMSFLLAVVIAVLVGSIRAMNFSKTLNLILMAYIEVF- 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P L+ +   Y                   V     +  + LS    A+I+EI+R+ 
Sbjct: 62  -RGTPLLIQLFFIYY-----------GLPSIGIVMSSTFAAVLGLSLNGGAYISEIIRAA 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP GQ EAA +LG++  ++   ++LPQA R  IPPL + +  +LK SSL   +   +
Sbjct: 110 IQSVPVGQFEAAESLGMSKIESMIYIVLPQAFRITIPPLVNSFSAILKESSLISVLAITE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L  +G  I  +T +  EI L    IYL L  +I++   ++  K+
Sbjct: 170 LTRIGQLIYTKTSRPFEIYLTIGLIYLVLVSIISIISWKIEKKL 213



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           I+     T  +     + A +I  LVG+ R     K +  I   Y+EVFR  P L+ +FF
Sbjct: 13  IIDAVFVTLKITIMSFLLAVVIAVLVGSIRAMNFSKTLNLILMAYIEVFRGTPLLIQLFF 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  + S+  +   +     G+ LN
Sbjct: 73  IYYGLPSIGIVMSSTFAAVLGLSLN 97


>gi|262184190|ref|ZP_06043611.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 317

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 8/260 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            +F    ++L++  I   +    FG     + L    +         I + + ++G+V  
Sbjct: 32  WVFATLLALLAIWFIISSARNEAFGWGTYFQYLFDTRIATAALHTIAITILAMIIGVVGG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
             A  + R         +   ++  +L  G P  V +     L   +    LG       
Sbjct: 92  -AALAVMRMSPNPVLGGVS--WVFLWLFRGTPIYVQLVFWGLLSALYQSINLGFTEISLT 148

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
             ++  F+   + L    AA++AEIVRSG+ +VP GQ EA+ ALG+      R  +LPQA
Sbjct: 149 EVLNNAFLLSVLGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVLPQA 208

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           MR IIPP  +++++LLK SSL VA+ + A++      I     + I ++++    YL+++
Sbjct: 209 MRIIIPPTGNEFISLLKTSSLVVAIPYTAEIFGRATDISAALFEPIPLLMVAATWYLAIT 268

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++ +    L  +      +
Sbjct: 269 SLLMVGQYFLERRFERGATR 288



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 22/146 (15%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           +   LL  +   + ++         N + G G                Y  D+  ATA L
Sbjct: 33  VFATLLALLAIWFIIS------SARNEAFGWG------------TYFQYLFDTRIATAAL 74

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
               +T  +    MI   + G  +   R+S N ++  +  V++ +FR  P  V + F   
Sbjct: 75  ----HTIAITILAMIIGVVGGAALAVMRMSPNPVLGGVSWVFLWLFRGTPIYVQLVFWGL 130

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGL 176
                  I      +     LNN  L
Sbjct: 131 LSALYQSINLGFTEISLTEVLNNAFL 156


>gi|261339908|ref|ZP_05967766.1| amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317819|gb|EFC56757.1| amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 307

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 1/264 (0%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +  +  +F L   + SV   P     +    F +   L     T+       V S  
Sbjct: 16  LRTVGAVAALFILAVVIQSVAFNPRWEWAVFARWFFDPVILEGVGQTLLLTLIGTVLSVF 75

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG-QF 254
           LG +L+L     S          + L      ++  +       L   L    P     +
Sbjct: 76  LGGMLALARLSSSWLLSSLAWAYIWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTDILW 135

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  V  +F +  + L+   +A+ AEIVR G + V  GQ EAA ALGL   + T  +
Sbjct: 136 GRFETINVLGQFSTAVVGLTLVQSAYTAEIVRGGFLGVDHGQYEAAAALGLPAWRRTVRI 195

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R+I+P   ++ ++L K +++   +   +L      I N+T + I ++++    Y
Sbjct: 196 ILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWY 255

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ +++   + +   +A  E++
Sbjct: 256 LVITTVLSAIQHVVERGLARSERR 279


>gi|225629164|ref|ZP_03787197.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|261323080|ref|ZP_05962277.1| amino acid ABC transporter permease [Brucella neotomae 5K33]
 gi|261756882|ref|ZP_06000591.1| cystine transport system permease [Brucella sp. F5/99]
 gi|225615660|gb|EEH12709.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|261299060|gb|EEY02557.1| amino acid ABC transporter permease [Brucella neotomae 5K33]
 gi|261736866|gb|EEY24862.1| cystine transport system permease [Brucella sp. F5/99]
          Length = 250

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 13/255 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
              ++     +   +        ++P  + L    L                      + 
Sbjct: 1   MHFLLCMFIPARFIIPITAKEPKLVPDWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLA 60

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               T L R F      ++   Y+  F   G P LV + + +                  
Sbjct: 61  LGLLTALVRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIG 107

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA 
Sbjct: 108 IYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQAT 167

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +PPL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +
Sbjct: 168 RTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSI 227

Query: 381 IALFMNRLNAKIALK 395
           ++    RL  +    
Sbjct: 228 LSALQVRLERRFGRY 242



 Score = 36.8 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 33  ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 92

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 93  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 123


>gi|186474261|ref|YP_001861603.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196593|gb|ACC74557.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 219

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    L      K  + S VLG+++  F   +     +     +   Y+S  L+ G P
Sbjct: 9   NTLPVLLLGAMVTLKFALASAVLGLLVG-FIVAIMGISGQPIIAGIARAYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y    D           G ++ P   +  +AL+    A+++E +R  ++ + 
Sbjct: 66  LLVQIFVVYYGLPDL----------GISLDPT-SAGILALTANAGAYLSESMRGAILGIS 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ  AA +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +++   
Sbjct: 115 QGQWGAAHSLGLTHMQTLRYVICPQALRMAVPSLGNTLISLIKDTSLVSVITVTEMLRAA 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +I  T Q + + L    IY  LS  ++     +  ++A    +
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWLLSTGMSWVQRHVEVRLARAHVR 219



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L+G + T   A +  +   ++G +V    +S   ++A I R YV + R  P LV IF 
Sbjct: 13  VLLLGAMVTLKFALASAVLGLLVGFIVAIMGISGQPIIAGIARAYVSLMRGTPLLVQIFV 72

Query: 148 LYKSVLSVLP 157
           +Y  +  +  
Sbjct: 73  VYYGLPDLGI 82


>gi|172056714|ref|YP_001813174.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
 gi|171989235|gb|ACB60157.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
          Length = 215

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 20/208 (9%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             VF+  LG++L++      R            LY+S F   G P L+ I + Y      
Sbjct: 28  AIVFALFLGLILAVM-----RDSRFAVLSGFARLYVSFF--RGTPLLLQILILYNGLVVL 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            +               F +L   LS + +A+I+E  R+ + +V RGQ EAA +LG+  R
Sbjct: 81  QL-------------TGFQALAFGLSLHFSAYISESFRAAISSVDRGQWEAADSLGIPRR 127

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           K  + V+LPQA+   IPPL++  ++++K++SL   V   +L  V   I   T   + ++L
Sbjct: 128 KTFKDVILPQALSRAIPPLSNSVIDIIKSTSLGTIVAVEELTYVSDQISATTYLVMPLLL 187

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               IY  +S +I    +RL A+ ++ E
Sbjct: 188 FSAAIYWIMSTLIQGVQHRLEARFSIPE 215



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            +   Y  AI      T   +   ++ A  +G ++   R S   +++   R+YV  FR  
Sbjct: 9   DNADVYGKAI----GTTLLASGFAIVFALFLGLILAVMRDSRFAVLSGFARLYVSFFRGT 64

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           P L+ I  LY  ++ +      ++     +  +  
Sbjct: 65  PLLLQILILYNGLVVLQLTGFQALAFGLSLHFSAY 99


>gi|170741316|ref|YP_001769971.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168195590|gb|ACA17537.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 222

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 14/225 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N   L F          + + + V G  L  F   L R    +  +     Y+   LI G
Sbjct: 6   NANHLLFLGQGALWTIGLSLIALVGGGALG-FVIALCRISALRAVRFASGAYVQ--LIQG 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV++ L +           F             +   +L+ Y  A++ EI R  + +
Sbjct: 63  TPLLVIMFLTF-----------FGLPPLGLRVSPLTAAGASLTIYVGAYLGEIWRGAIQS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPR Q EAA  L L+  +    V+LPQA+R   PP     + ++KN+SLA  VGF +L  
Sbjct: 112 VPRPQWEAAEGLALSRAQRMTKVILPQAVRIATPPTVGFMVQIVKNTSLASVVGFVELAR 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            G  I N   +   I  I   +Y ++   ++    RL  + A   
Sbjct: 172 AGQIINNSLFEPFLIYAIIAAVYFAMCFPLSRLSQRLERRGARGR 216



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 34/70 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   +  G + T  L+   ++    +G ++   R+SA + V +    YV++ +  P LV
Sbjct: 8   NHLLFLGQGALWTIGLSLIALVGGGALGFVIALCRISALRAVRFASGAYVQLIQGTPLLV 67

Query: 144 VIFFLYKSVL 153
           ++F  +  + 
Sbjct: 68  IMFLTFFGLP 77


>gi|301629485|ref|XP_002943870.1| PREDICTED: hypothetical protein LOC100490970 [Xenopus (Silurana)
           tropicalis]
          Length = 569

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 10/159 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    ++  A    YI  +L+ G P ++ +   Y   F  P +            P+F +
Sbjct: 40  RVSRLRSLSACVNGYI--WLMRGTPLMLQMLFIY---FALPFVPVIG-----VRLPDFPA 89

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              A +   AA+ AEI R+G+ +V RGQ EAA  LG+ + +A R ++LPQ +R+I+PP++
Sbjct: 90  AVAAFALNYAAYFAEIFRAGIQSVERGQYEAAKVLGMNYGQAMRRIVLPQMVRNILPPMS 149

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           ++ + L+K++SL   +   DL+     I+ +        
Sbjct: 150 NEAITLVKDTSLIYVLALNDLLRAARGIVQRDFTTTPAW 188


>gi|255093160|ref|ZP_05322638.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
          Length = 223

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 107/228 (46%), Gaps = 15/228 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + + + L    +    +T+       VFS ++G +++L     S ++  K    +  +
Sbjct: 3   FNMKYFLELFPIIMKSFNVTVILAISSLVFSLIIGTIVAL-----SSYYKVKVLNQICKV 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G P +  +   + L+F    +  F             +  I LS    A+++
Sbjct: 58  YVSIF--RGTPLMPQL---FFLYFGLAYMNDF-----VKNMDPVFATSIVLSLNMGAYMS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ ++++ +GQ+EAA  +GLT+ +  + +++PQA+R  +P L + +++L+K SS+A 
Sbjct: 108 ETIRASILSIDKGQIEAAYVMGLTNLQTMKRIVIPQAVRVALPSLFNNFIDLIKGSSVAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            VG  D++    +    + +  E+    M IY  +   +     ++  
Sbjct: 168 VVGVNDIMGAAKSQGALSFKFFEVYGAVMVIYWCIITPLGWGTKKIRK 215



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+  F  T  LA S ++ + IIGT+V        K++  IC+VYV +FR  P +  +FFL
Sbjct: 15  IMKSFNVTVILAISSLVFSLIIGTIVALSSYYKVKVLNQICKVYVSIFRGTPLMPQLFFL 74

Query: 149 YKSV 152
           Y  +
Sbjct: 75  YFGL 78


>gi|158423695|ref|YP_001524987.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330584|dbj|BAF88069.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 225

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 14/239 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +  H   +   +  ++  L      +     +   +  L   L L    L R        
Sbjct: 1   MARHGARMSAFLTQSSEYLPILIKGLWLTIAVTTLALCLSTALGLV-WALLRTSGVPMLA 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A   +++   L+ G+P LV++   Y           F           F +  I L+   
Sbjct: 60  APTRVFVE--LVRGVPILVILFYIY-----------FVMPDFGIDLSAFQAGVIGLALTY 106

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           + +I E  R+G+ AV RGQ+EAA ++G+      R V+LPQA + ++PP  +  + LLK+
Sbjct: 107 SCYIGETFRAGIEAVDRGQVEAAKSIGMKRPLMMRRVILPQAFKIVLPPYGNNIVMLLKD 166

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SS    +  A+L   G  + + T   + I  +   +YL L++ + + M +L  ++    
Sbjct: 167 SSQVSVISVAELTMQGKMLASSTFNNMTIFTLVALLYLCLTVPLNIVMRQLELRLGKAR 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 39/90 (43%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           T  S Y   ++ G   T  +    +  +T +G +    R S   ++A   RV+VE+ R +
Sbjct: 13  TQSSEYLPILIKGLWLTIAVTTLALCLSTALGLVWALLRTSGVPMLAAPTRVFVELVRGV 72

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           P LV++F++Y  +               G+
Sbjct: 73  PILVILFYIYFVMPDFGIDLSAFQAGVIGL 102


>gi|251781980|ref|YP_002996282.1| hypothetical protein SDEG_0566 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390609|dbj|BAH81068.1| hypothetical protein SDEG_0566 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 233

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 15/217 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+  +    + + VLG+++   +T       +K  + +  +Y+        P 
Sbjct: 25  FLKAFLYTLGVSLAALLLAMVLGVIIGGLSTA-----KQKGNRVIARVYVEF--YQNTPL 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV +   Y         G      G  +   F++    +  Y AA+IAE++RSG+ AVP+
Sbjct: 78  LVQVVFMYY--------GLAIISKGFIMPSAFLTTVCCVGLYHAAYIAEVIRSGIEAVPK 129

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++ G T  +   L+++PQA+R+I+PPLT+Q +NL+KN+S+   +  ADL+    
Sbjct: 130 GQTEAALSQGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTAK 189

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                T   +       F+Y  L   IA+F  R   +
Sbjct: 190 VWAYDTTYYVPAFAGAAFLYFILCFPIAIFGRRQEER 226



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L  F+ T  ++ + ++ A ++G ++G    +  K    I RVYVE ++N P LV + F+
Sbjct: 25  FLKAFLYTLGVSLAALLLAMVLGVIIGGLSTAKQKGNRVIARVYVEFYQNTPLLVQVVFM 84

Query: 149 YKSV 152
           Y  +
Sbjct: 85  YYGL 88


>gi|73540165|ref|YP_294685.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72117578|gb|AAZ59841.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 227

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 6/229 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                +    L      M  + KI V + ++GIV       + R    K        Y++
Sbjct: 5   FDFSSITPATLEVLGEGMLVSLKITVTAIIVGIVWGTIL-AMMRLSSVKPLNWFAQGYVT 63

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F       LV++ L + L   + +   FN    S +     S  IA S + AA+ +EI+
Sbjct: 64  IFRSIP---LVMVLLWFFLIIPQVLQNIFNLSPASDLR--MTSALIAFSLFEAAYYSEII 118

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V RGQM AA ALG+T+ +  +LV+LPQA R+++P L +Q + L +++SL     
Sbjct: 119 RAGIQSVSRGQMFAAQALGMTYGQTMKLVILPQAFRNMVPLLLTQGIILFQDTSLVYVSA 178

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            AD       +  + G+ +E++L    +Y  +   ++L + R   K+AL
Sbjct: 179 LADFFGQAYGVGERDGRIVEMLLFAGLVYFVICYSVSLMVKRYQKKVAL 227



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 39/80 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + +  +  + +I   + GT++   RLS+ K + W  + YV +FR+IP ++V+ +
Sbjct: 17  VLGEGMLVSLKITVTAIIVGIVWGTILAMMRLSSVKPLNWFAQGYVTIFRSIPLVMVLLW 76

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
            +  +  VL    +      
Sbjct: 77  FFLIIPQVLQNIFNLSPASD 96


>gi|288936956|ref|YP_003441015.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288891665|gb|ADC59983.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 253

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 18/215 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +    +F+F +G++L L      R           L +  T  I+ L  + L+ + +  
Sbjct: 34  VSLLAVLFAFPVGVLLCLARLSPWRW----------LSWPVTCWIYLLRGIPLMMVVFWT 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+L   N  G       F ++   L  Y +A+IAEIVR G+ A+P GQ EA+ ALG
Sbjct: 84  YFCVPLLIGHNISG-------FSTMLCTLVIYESAYIAEIVRGGIQALPSGQYEASRALG 136

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QA 363
           + H +A RLV+LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   + 
Sbjct: 137 MGHVRALRLVILPQALYNALPSLVSQLVSIIKDSTLGYVINVPELTYAANQVSNQLLTKP 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++  I    Y  ++  +    NRL  +IA + ++
Sbjct: 197 FQVFAIVALSYYIINFSLTWLANRLELRIASRRQR 231



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 11/147 (7%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  ++   ++ A  +G L+   RLS  + ++W    ++ + R IP ++V+F+ Y
Sbjct: 25  LGGVLCTLLVSLLAVLFAFPVGVLLCLARLSPWRWLSWPVTCWIYLLRGIPLMMVVFWTY 84

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             V  ++                   L    +         V   +  +         SR
Sbjct: 85  FCVPLLIGHNISGFS---------TMLCTLVIYESAYIAEIVRGGIQALPSG--QYEASR 133

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLV 236
                  +AL L+ +   L   LP+LV
Sbjct: 134 ALGMGHVRALRLVILPQALYNALPSLV 160


>gi|327393260|dbj|BAK10682.1| glutamine ABC transporter permease protein GlnP [Pantoea ananatis
           AJ13355]
          Length = 219

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    +            I +   V G+++ L A   +R +       + L++I
Sbjct: 1   MEFDWSVIWPAMPALLEGAKMTLIISIIGLVGGLIIGLVAG-FARAYGGWISNHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAFP------DLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + R+  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRVKI 218



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 36/81 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++       A+L G   T  ++  G++   IIG + G  R     +   I  V++E+ R
Sbjct: 4   DWSVIWPAMPALLEGAKMTLIISIIGLVGGLIIGLVAGFARAYGGWISNHIALVFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P +V + F+Y ++    P 
Sbjct: 64  GTPIVVQVMFIYFALPMAFPD 84


>gi|78355443|ref|YP_386892.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217848|gb|ABB37197.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 277

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-- 198
           PL ++  L+ +VL    +   +      + +         ++    A   +   VLG+  
Sbjct: 19  PLWLLAALFIAVLICWNMAADADYTAIFVTVRKGVAVTLYVSFIAYALSLLAGLVLGLWR 78

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V      R +  F+ +  + +P+L I  ++ F     ++ AL + L    P++       
Sbjct: 79  VSRCRLLREAATFYIEIVRGIPMLVILYYIAFVGAPGLVDALNWLLS---PLIEAGLTAR 135

Query: 259 GSTVSPEF-MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            S  S +F     +AL+   +AFIAEIVR+G+ +V  GQMEAA +LGL+  +A R V+LP
Sbjct: 136 ISVRSLDFTWRAILALTVGYSAFIAEIVRAGVESVAAGQMEAARSLGLSRWQAMRKVVLP 195

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R+++PPL + ++ +LK+S+L  A+G  D+  +G      T    E   +  F+YL +
Sbjct: 196 QALRNVLPPLANDFVAMLKDSALVSALGVQDITQLGKVYSASTFMFFETYNVVAFLYLVM 255

Query: 378 SIMIALFMNRLNAK 391
           +I ++L +  L  +
Sbjct: 256 TIGLSLCIRGLERR 269



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 32/61 (52%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T +++F     + + G ++G  R+S  +L+      Y+E+ R IP LV+++++   
Sbjct: 52  GVAVTLYVSFIAYALSLLAGLVLGLWRVSRCRLLREAATFYIEIVRGIPMLVILYYIAFV 111

Query: 152 V 152
            
Sbjct: 112 G 112


>gi|259908983|ref|YP_002649339.1| glutamine ABC transporter permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224964605|emb|CAX56118.1| Glutamine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283478993|emb|CAY74909.1| glutamine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 219

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V   V G+++ L A   +R +     + + L++I
Sbjct: 1   MQFDWSAIWPAIPILLEGARMTLLISVLGLVGGVIIGLVAG-FARAYGGWLSRNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ RG  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINRGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMKI 218



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T  ++  G++   IIG + G  R     L   I  V++E+ R
Sbjct: 4   DWSAIWPAIPILLEGARMTLLISVLGLVGGVIIGLVAGFARAYGGWLSRNIALVFIELIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|116254212|ref|YP_770050.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258860|emb|CAK09968.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 230

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 18/238 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +    FG   N   L     T+       +   +LG  L+L      R    +    + 
Sbjct: 4   WNWSGFFGYLFNPFILGGVFTTVWLTVVSLIAGLILGFALALM-----RRSSRRVPYYIA 58

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  F   G P LV +   Y        L  F             +  + L+   AA+
Sbjct: 59  KAYIWLF--RGTPLLVQLIAIYT------ALPLFGIKFTVIE-----AALLGLALNEAAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ AVP GQ  AA ALG+T R+  R +++PQA + I+PPL +    LLK +S+
Sbjct: 106 LAEIIRAGIEAVPEGQTRAARALGMTERQIMRYIVMPQAFKVIVPPLGNSVNGLLKTTSV 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +   +L+     +I +    +E+  +    YL L+ +   F + +  ++     +
Sbjct: 166 TSVISVEELLRRTQVLIQERFMVLELFAVAAIYYLLLTTLWDFFQSHIEKRLGQAGSR 223



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T WL    +I   I+G  +   R S+ ++  +I + Y+ +FR  P LV +  +
Sbjct: 18  ILGGVFTTVWLTVVSLIAGLILGFALALMRRSSRRVPYYIAKAYIWLFRGTPLLVQLIAI 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y ++               G+ LN
Sbjct: 78  YTALPLFGIKFTVIEAALLGLALN 101


>gi|261823410|ref|YP_003261516.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607423|gb|ACX89909.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 223

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 116/234 (49%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L + + +  + L +   T+        F+ VLG++L+L           K    + ++ +
Sbjct: 5   LAYLLKVFPQVLMYLPTTLFLAVVSMFFAMVLGLILALVRES-------KIVAVVKIVEL 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L  G+P+LV + + Y   F  P L         +      +  I  S  T+A++AEI
Sbjct: 58  YISLFRGIPSLVQLFIIY---FGLPQL-----FPSLSNLDAMTAAIIGFSLKTSAYMAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL +V  GQ EA +++G++  +  R ++LPQAM + +P   + +++L+K++S+A A+
Sbjct: 110 FRAGLASVDFGQTEAGLSIGMSKAQVYRRIVLPQAMLNALPATGNTFISLIKDTSVAFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ++L + G  I  ++ +  E  L+   IY  + ++ A    +L  K+    ++
Sbjct: 170 GVSELFAEGKMIAAESLRFFETFLVVGLIYWMVIVVYAWLQKQLEKKLNHSLQR 223



 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T +LA   M  A ++G ++   R S    V  I  +Y+ +FR IP LV +F +Y  +
Sbjct: 19  LPTTLFLAVVSMFFAMVLGLILALVRESKIVAVVKIVELYISLFRGIPSLVQLFIIYFGL 78

Query: 153 LSVLP 157
             + P
Sbjct: 79  PQLFP 83


>gi|152994484|ref|YP_001339319.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835408|gb|ABR69384.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 216

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F N   L            + + +F+ G  ++L  T + R       + +  +Y+  F  
Sbjct: 4   FSNYDILRNLMFATQWTILLSLAAFIGGTTVALALTAM-RLTRNPIMQRIVKIYVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  ++L+ +T+AF+ EI R  +
Sbjct: 61  QGTPLLMQMFLCF-----------FGLSMLGYEISAWSAAILSLTFFTSAFLVEIWRGCI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             +P+GQ EA+  LGL+  +  R ++LPQA+R    P     + ++K ++LA  +GF +L
Sbjct: 110 DTLPKGQWEASRCLGLSFLQTLRFIILPQAIRVATAPTVGFSVQVIKGTALASVIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             VG  + N T +  +I  +   IY  L   ++L+   L  K  +  
Sbjct: 170 TKVGTMLNNATFEPFKIFTLVALIYFVLCYPLSLYSKHLEKKFNVSR 216



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 37/105 (35%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S+      ++     T  L+ +  I  T +   + A RL+ N ++  I ++YVE+F+  P
Sbjct: 5   SNYDILRNLMFATQWTILLSLAAFIGGTTVALALTAMRLTRNPIMQRIVKIYVELFQGTP 64

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
            L+ +F  +  +  +             +                
Sbjct: 65  LLMQMFLCFFGLSMLGYEISAWSAAILSLTFFTSAFLVEIWRGCI 109


>gi|91225416|ref|ZP_01260538.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91189779|gb|EAS76052.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 306

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYIS 225
                    T+  +     F+ V G +L L     S          +       PL+++ 
Sbjct: 72  PYFFQGLISTLRLSIWGISFALVFGTLLGLARFSRSVWLRTPANAFIQLVRNIPPLVFVF 131

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +     L   +  +P   Q    G S +     S  + +   ++A+IA
Sbjct: 132 IFYFFISNQLIPLLGLEDLLRNYNGEPNALQRFLFGPSNLWENLASGVLCVGLLSSAYIA 191

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VR GL ++ +GQ EAA +LGL+     R V+ PQ ++SI P L  Q ++L+K++S+  
Sbjct: 192 EVVRGGLQSIDQGQWEAADSLGLSRWVKYRFVIAPQVLKSITPALAGQTISLVKDTSIVS 251

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   ++  VG  + N +G   EI LI    Y  +   ++L    + AK
Sbjct: 252 LISIQEMTFVGTEMANSSGYIFEIWLIVGLAYFLICFGLSLIFRHIEAK 300



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  L+  G+  A + GTL+G  R S +  +      ++++ RNIPPL
Sbjct: 73  YFFQGLISTLRLSIWGISFALVFGTLLGLARFSRSVWLRTPANAFIQLVRNIPPL 127


>gi|257486647|ref|ZP_05640688.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289625251|ref|ZP_06458205.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289647248|ref|ZP_06478591.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298488754|ref|ZP_07006782.1| histidine ABC transporter, permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298156672|gb|EFH97764.1| histidine ABC transporter, permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320325646|gb|EFW81708.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320327071|gb|EFW83085.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330867262|gb|EGH01971.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330876918|gb|EGH11067.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330889585|gb|EGH22246.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|331010125|gb|EGH90181.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 242

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 3/237 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L    F                 K+ V S  L I+L L     ++       +    
Sbjct: 6   MQNLGLSAFSLKGFGPLLLEGTWMTIKLAVLSLALSILLGLIGAS-AKLSSSALLRVPAQ 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y  T LI G+P LVL+ L +        +              F +  I L     A+ 
Sbjct: 65  IY--TTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYF 122

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++L 
Sbjct: 123 TETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALV 182

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G ADLV         T Q    +++   IYL ++      +       A   ++
Sbjct: 183 SIIGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITSASNFALRWAERHYAAGSRE 239



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +  + +LS++ L+    ++Y  + R IP LV+
Sbjct: 19  FGPLLLEGTWMTIKLAVLSLALSILLGLIGASAKLSSSALLRVPAQIYTTLIRGIPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 79  MLLIFYSLQTWLTMLTDAMEWEY 101


>gi|325275177|ref|ZP_08141144.1| glutamate/aspartate ABC transporter permease [Pseudomonas sp.
           TJI-51]
 gi|324099664|gb|EGB97543.1| glutamate/aspartate ABC transporter permease [Pseudomonas sp.
           TJI-51]
          Length = 248

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      ++ + +LG VL +      R    +    +  +Y+  F    +P
Sbjct: 24  WYITGLGWTIAIAISAWIIALLLGSVLGVM-----RTVPNRLVSGIATIYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +   +S+ I L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPEGLQEWFKQDLNPTTSALISVVICLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  AA A+G +  +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPRGQESAARAMGFSLPQIYTNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMRMVEKKVAV 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 43/86 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A S  I A ++G+++G  R   N+LV+ I  +YVE+FRN+P 
Sbjct: 18  SETYLDWYITGLGWTIAIAISAWIIALLLGSVLGVMRTVPNRLVSGIATIYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQEWFKQD 103


>gi|296139760|ref|YP_003647003.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296027894|gb|ADG78664.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 307

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 110/267 (41%), Gaps = 10/267 (3%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +  R +   V +    + V S +  P            +   L     T+       V  
Sbjct: 30  QWGRWVAVAVTLVLFAQLVASAITNPRFDWPTFGAYLFSPTVLEALWFTVQLTFIGAVLG 89

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LKYQLHFDK 248
           F+LG VL+L     +R    +   +    ++  F    L   +L       L   L    
Sbjct: 90  FLLGGVLAL-----ARLSGNRVLASFSFGFVWVFRSVPLIVQILFFGYLGALYPTLGIGI 144

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P    F       +   + +  I +  + AA+ +EIVR+G++ V  GQ +AA ALG+   
Sbjct: 145 PFGPTFADAPTKDLLSPYTAAVIGIVLHQAAYGSEIVRAGILGVAPGQHDAARALGIPPV 204

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
                + LPQA+R+I+PP  ++ + LLK ++    +   DL      I  + G+ I ++L
Sbjct: 205 AHLLRITLPQALRTIVPPAANEVIGLLKGTTAVFILALPDLFYQVQVIYGRNGRIIPLLL 264

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
           + +  Y  L+ ++++  + +  +++  
Sbjct: 265 VAVAWYAILTTVLSIGQHSVEKRLSRG 291



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 31/61 (50%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L     T  L F G +   ++G ++   RLS N+++A     +V VFR++P +V I F  
Sbjct: 72  LEALWFTVQLTFIGAVLGFLLGGVLALARLSGNRVLASFSFGFVWVFRSVPLIVQILFFG 131

Query: 150 K 150
            
Sbjct: 132 Y 132


>gi|113460399|ref|YP_718461.1| arginine transporter permease subunit ArtQ [Haemophilus somnus
           129PT]
 gi|170717489|ref|YP_001783479.1| arginine ABC transporter permease [Haemophilus somnus 2336]
 gi|112822442|gb|ABI24531.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Haemophilus somnus 129PT]
 gi|168825618|gb|ACA30989.1| polar amino acid ABC transporter, inner membrane subunit
           [Haemophilus somnus 2336]
          Length = 223

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L            + V S +LG+ LS+F   L  H      K    +     L+ 
Sbjct: 1   MFIDYLPLMYTATLMTLGLAVCSLLLGLALSIFFVVLETHKWACIRKPTATIVT---LLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y   F  P + ++  IG       F    +ALS   A++ ++ +R  + 
Sbjct: 58  GLPEILVVFLIY---FGVPEILEW-VIGEYVEFGAFGCGVVALSIIFASYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AIPLGQWESGAALGLSRSYTFIFLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I   T Q          +YL +++     + +L  ++   E+
Sbjct: 174 RQAELINTNTHQPFTWYGFAALLYLLITLFSQFIIRKLERRVTRFER 220


>gi|319783615|ref|YP_004143091.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169503|gb|ADV13041.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 273

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 5/256 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +  + L    +         +   +      +        +     +   S VLG +LS+
Sbjct: 23  IAGYALVGLWILFGIGIVSYLFFAWNPDFFAKYAPAYLSGLGVTLALVSISMVLGAILSV 82

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    +    L   Y+  F   G P LV   L Y       V  Q   +     
Sbjct: 83  -PVAYGRMSSNRILSGLAYCYVYFF--RGTPLLVQTYLVYYGLGSFRVELQSVGLWD-FF 138

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F     A +  TAA+ AEI+R  + +VPRGQ E A +LGL   +  R ++LPQA+  
Sbjct: 139 KDAFNCGVFAFALNTAAYQAEILRGAIESVPRGQWEGAASLGLHKLQTLRKIILPQALIV 198

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            + P  ++ + ++K S++   +   DL+         +   I+  +    +YL +  ++ 
Sbjct: 199 ALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFD-IQAYIWVALVYLVMVEILR 257

Query: 383 LFMNRLNAKIALKEKK 398
             +  +  +I +  K+
Sbjct: 258 HGVEWIERRITVHLKR 273



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 37/84 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA A L G   T  L    M+   I+   V  GR+S+N++++ +   YV  FR  P LV 
Sbjct: 55  YAPAYLSGLGVTLALVSISMVLGAILSVPVAYGRMSSNRILSGLAYCYVYFFRGTPLLVQ 114

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
            + +Y  + S         +  F 
Sbjct: 115 TYLVYYGLGSFRVELQSVGLWDFF 138


>gi|116628342|ref|YP_820961.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101619|gb|ABJ66765.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|312278968|gb|ADQ63625.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 307

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 115/294 (39%), Gaps = 15/294 (5%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
                I+G +  A  ++    ++W+  +           + +  +  + +S         
Sbjct: 13  WYLQVILGLVGLAVAVALAIPLSWLVEILWGYV------LQLVTIVFNWISSWMPAGKLF 66

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                     + +    LT+        F  +L +V ++      R  +       P+  
Sbjct: 67  SWKAVFDAVPKIVERLPLTLGLTIAGAFFGLILALVFAVVKINRVRILY-------PIQA 119

Query: 224 ISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +    + G P LV + L Y     F + + G+F         P  +    A +   AA++
Sbjct: 120 VFVSFLRGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYM 179

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA
Sbjct: 180 SETIRAAIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLA 239

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + G  ++ +    +     +  E  +    +Y ++SI+I      +   +A+K
Sbjct: 240 FSAGIVEMYAQAQILGGADYRYFERYISVALVYWAISILIEYIGRSVENHMAIK 293


>gi|15890304|ref|NP_355976.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158505|gb|AAK88761.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 219

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 14/226 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                F    +     + + + V G ++  F   L+R    K  +     YI   +I G+
Sbjct: 8   WNEFGFLLTALQWTVLLTIIALVGGGIVGFFI-ALARTSDNKLLRIAAGTYIQ--VIQGI 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+++ L Y                     P  ++   +++ YT+ ++AEI R  + AV
Sbjct: 65  PVLMILFLSYY-----------GLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q EA+ +L LT  +  R V+LPQA+R  +PP     + ++KN+S+A  +GF +L   
Sbjct: 114 PKQQWEASESLALTRAQQYRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARA 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  I N T Q   + +    +Y  +   ++     L  ++     +
Sbjct: 174 GQLINNATFQPFRVFVAVAVLYFIVCYPLSQLSRWLERRLHAGSNR 219



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L    ++   I+G  +   R S NKL+      Y++V + IP L+++F  
Sbjct: 14  LLTALQWTVLLTIIALVGGGIVGFFIALARTSDNKLLRIAAGTYIQVIQGIPVLMILFLS 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +          I     M +   G           A
Sbjct: 74  YYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQA 112


>gi|55823557|ref|YP_141998.1| ABC transporter amino acid permease [Streptococcus thermophilus
           CNRZ1066]
 gi|55739542|gb|AAV63183.1| ABC transporter amino acid permease protein [Streptococcus
           thermophilus CNRZ1066]
          Length = 285

 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 110/284 (38%), Gaps = 15/284 (5%)

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +    ++    ++W+  +           + +  +    +S                   
Sbjct: 1   MAVAAVALAIPLSWLVEILWGYV------LQLVTIVFKWISSWMPAGKLFSWKAVFDAVP 54

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + +    LT+        F  +L +V ++      R  +       P+  +    + G P
Sbjct: 55  KIVERLPLTLGLTIAGAFFGLILALVFAVVKINRVRILY-------PIQAVFVSFLRGTP 107

Query: 234 TLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + L Y     F + + G+F         P  +    A +   AA+++E +R+ + A
Sbjct: 108 ILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRAAIQA 167

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + G  ++ +
Sbjct: 168 VDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIVEMYA 227

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               +     +  E  +    +Y ++SI+I      +   +A+K
Sbjct: 228 QAQILGGADYRYFERYISVALVYWAISILIEYIGRSVENHMAIK 271


>gi|296132383|ref|YP_003639630.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola sp. JR]
 gi|296030961|gb|ADG81729.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola potens JR]
          Length = 220

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 19/221 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--PLLY 223
                +  +              + V SF+L +V+       +     +TG+ +  P+  
Sbjct: 3   WDQFIIIWQNAPDFIAATGMTLSVTVISFLLALVIG------AGTGVARTGRNIFNPIFQ 56

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   +  G P L+ +   Y                     P F +    L     A+I+E
Sbjct: 57  VYVEIFRGTPLLIQLFFIYY-----------GLPEAGIAMPAFTAAVTGLGLNGGAYISE 105

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+ ++A+  GQ EAA+ALGLT  +  R V+ PQA+R  +PPL + + ++LK SSL   
Sbjct: 106 IIRAAVLAIDPGQQEAALALGLTRLQTLRYVIFPQAVRIAVPPLMNTFSSMLKESSLVSV 165

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           +   ++  +G  I  +T +A E+ L+   IY  L+ +++  
Sbjct: 166 LAICEISRLGQLIYTRTFRAFEVYLVVGAIYFCLTFLVSRI 206



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 1/100 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +     T  +     + A +IG   G  R   N +   I +VYVE+FR  P L+ +FF+
Sbjct: 16  FIAATGMTLSVTVISFLLALVIGAGTGVARTGRN-IFNPIFQVYVEIFRGTPLLIQLFFI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +               G+ LN        +     A 
Sbjct: 75  YYGLPEAGIAMPAFTAAVTGLGLNGGAYISEIIRAAVLAI 114


>gi|167574646|ref|ZP_02367520.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia oklahomensis C6786]
          Length = 342

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 11/251 (4%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SVL  P     +    FL+   LS    T+   A   +F F LG+ L+L     +R    
Sbjct: 54  SVLGNPQWGWPVFAEWFLSAPVLSGLARTLLLTALGALFGFALGVPLAL-----ARVSRS 108

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------GQFNFIGGSTVSPEFM 267
               A    +I  F    L  L+LI       +D   L        F  +  + +   F 
Sbjct: 109 PIVAACAWAFIWLFRSIPLVVLLLILNNLGYLYDHVWLGVPFTGITFADVATTDLISPFC 168

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+   AAF AE +R G+++V  GQ+EAA ALGL   +    ++LPQAMR+ +P  
Sbjct: 169 AAVLGLTLNHAAFAAEGIRGGILSVDPGQLEAAAALGLPRARQATRIVLPQAMRAFLPVA 228

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  ++L K +S+   +   +L      I  +  + I ++++    YL +  ++++   +
Sbjct: 229 FNDLISLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSIVQAQ 288

Query: 388 LNAKIALKEKK 398
           +  + A    +
Sbjct: 289 VERRYARGAVR 299


>gi|294497133|ref|YP_003560833.1| glutamine ABC transporter permease GlnM [Bacillus megaterium QM
           B1551]
 gi|294347070|gb|ADE67399.1| glutamine ABC transporter, permease protein GlnM [Bacillus
           megaterium QM B1551]
          Length = 212

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 115/232 (49%), Gaps = 25/232 (10%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +L F +  NN  L          A +   V SFVLG ++++      R    K    +  
Sbjct: 1   MLDFSILTNNMDLYLEGFKYTIIASLIALVASFVLGTIIAVM-----RIAPLKIVNVIGT 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+                      + P++    FI          +  + L+ YTAAFI
Sbjct: 56  VYVEFIR------------------NIPLVVIVFFIFIVAGISGTAAGVLGLTIYTAAFI 97

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+G++AVP+GQ+EAA + GLT+ +A R ++LPQA++ +IPPL +Q++NL+KNSS+ 
Sbjct: 98  AEAIRAGIMAVPKGQLEAARSSGLTYGQAMRFIILPQAIKIVIPPLGNQFINLVKNSSVL 157

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             V   DL+     + +QT    ++ +     YL L+I ++L +  L  ++ 
Sbjct: 158 GIVAGFDLMYQADLVSSQTYVVFDVYIFVALFYLVLTIPLSLGVGYLEKRLG 209



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 35/66 (53%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ ++  ++     L GF  T   +   ++ + ++GT++   R++  K+V  I  VYVE 
Sbjct: 1   MLDFSILTNNMDLYLEGFKYTIIASLIALVASFVLGTIIAVMRIAPLKIVNVIGTVYVEF 60

Query: 136 FRNIPP 141
            RNIP 
Sbjct: 61  IRNIPL 66


>gi|300933297|ref|ZP_07148553.1| putative ABC transport system, permease protein [Corynebacterium
           resistens DSM 45100]
          Length = 310

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 3/261 (1%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN-AKIFVFSFVLGI 198
           P   V   +  ++L    I   +             L             + VFS ++G+
Sbjct: 22  PWRWVTAAILLALLVWFIIGAATNEAYHWDTYFQYVLDTRVAIAALRTIALTVFSMLIGV 81

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L      L R       +A+  LY+  F    +   ++        +    +G      
Sbjct: 82  ILGAIVAVL-RMSPNPVLQAVAWLYLWIFRGTPIYVQLVFWGLLGSIYQSVSVGFAEIDL 140

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            + +S  F+   + L+   AA++AEIVR+G+ AVP GQ EA+ ALG+T  +  R  +LPQ
Sbjct: 141 QAFLSNMFLLAVVGLALNEAAYMAEIVRAGIQAVPEGQSEASKALGMTWWQNMRRTVLPQ 200

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           AMR IIPP  +++++LLK +SL +A+ +A +L      I N     + ++L+    YL +
Sbjct: 201 AMRIIIPPTGNEFISLLKTTSLVIAIPYAGELYGRTTDISNNLFLPVPLLLVAATWYLVI 260

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           + ++ +  + L    +    +
Sbjct: 261 TSLLMVAQHYLERYFSRGSSR 281



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 21/145 (14%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           + A +L  + +W +     N E  +      ++ +                      + +
Sbjct: 26  VTAAILLALLVWFIIGAATN-EAYHWDTYFQYVLDTR--------------------VAI 64

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
             + T  L    M+   I+G +V   R+S N ++  +  +Y+ +FR  P  V + F    
Sbjct: 65  AALRTIALTVFSMLIGVILGAIVAVLRMSPNPVLQAVAWLYLWIFRGTPIYVQLVFWGLL 124

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGL 176
                 +      +    FL+N  L
Sbjct: 125 GSIYQSVSVGFAEIDLQAFLSNMFL 149


>gi|257470563|ref|ZP_05634653.1| amino acid ABC transporter permease [Fusobacterium ulcerans ATCC
           49185]
 gi|317064769|ref|ZP_07929254.1| amino acid ABC transporter [Fusobacterium ulcerans ATCC 49185]
 gi|313690445|gb|EFS27280.1| amino acid ABC transporter [Fusobacterium ulcerans ATCC 49185]
          Length = 208

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 19/219 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT++      +FS  LGI+LSL     +            ++ + T++  G P
Sbjct: 7   FILKGMKLTVNLYVVTMLFSLPLGILLSLGRVSKNTTLSN-------MIQVYTWVFRGTP 59

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ +   Y   +  PV+       G T++P F +  +       A+  EI R  ++ + 
Sbjct: 60  LLLQLFFVY---YGLPVV-------GITLTP-FAAASLTFVINYTAYFCEIFRGSILGID 108

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA  LG+ + +    +++PQA+ + +PPL+++ ++L+K++SL  A+G A+++   
Sbjct: 109 PGQYEAAKVLGMKYWQTMIRIIIPQALITALPPLSNEAISLIKDTSLVSAIGMAEILRNS 168

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++ +   +I    I   +YL LS ++ +F  R+  K+
Sbjct: 169 RELVTRDF-SITPFFICAVVYLGLSTIVVIFFKRMEKKV 206



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 38/89 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L    M+ +  +G L+  GR+S N  ++ + +VY  VFR  P L+ +FF+
Sbjct: 8   ILKGMKLTVNLYVVTMLFSLPLGILLSLGRVSKNTTLSNMIQVYTWVFRGTPLLLQLFFV 67

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           Y  +  V               +N     
Sbjct: 68  YYGLPVVGITLTPFAAASLTFVINYTAYF 96


>gi|227891536|ref|ZP_04009341.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|227866683|gb|EEJ74104.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
          Length = 217

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 110/219 (50%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    V SF++G+VL +      ++     G          FLI  +  L
Sbjct: 17  LEGLWVTLEVSVISIVLSFIIGLVLGVIRYVKIKYLSAAVG----------FLIDIIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P L               ++   AL  + +A +AEIVRSG+ AVP G
Sbjct: 67  PLLLIIFFTYFGLPEL--------GLRMTPMLAAVTALVVFESAMLAEIVRSGIQAVPVG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + GLT+ +A   +++PQA++ +IPPL SQ+++L+K++SLA  +   +L+     
Sbjct: 119 QMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I +Q T   + + L+   +Y  +   ++L   RL  +  
Sbjct: 179 IYSQNTTYMVPMYLMIAVMYFVVCYCLSLVARRLEKRYG 217



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   ++ + IIG ++G  R    K ++      +++ RN+P 
Sbjct: 9   SWINLRFLLEGLWVTLEVSVISIVLSFIIGLVLGVIRYVKIKYLSAAVGFLIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y  +  +
Sbjct: 69  LLIIFFTYFGLPEL 82


>gi|227515553|ref|ZP_03945602.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus fermentum ATCC 14931]
 gi|227085983|gb|EEI21295.1| glutamate ABC superfamily ATP binding cassette transporter permease
           protein [Lactobacillus fermentum ATCC 14931]
          Length = 227

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 9/232 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L     TM  +    +  F++G+++ L      R    K    +   Y
Sbjct: 1   MFDFLGQYWPLFLEGTAQTMIISIIGVIIGFLIGLLMVLM-----RMSKVKPISWIARAY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   ++ G P+++ + L Y L      L Q   +G        +   IAL   + A+ AE
Sbjct: 56  I--AIVRGTPSMIQVMLIYYLLARSLPLPQTQILGSGL--DRIIPGAIALGLNSGAYTAE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG+I++P GQ EA ++LGL+ ++    ++LPQA+R+++P + ++++ L+K SS+   
Sbjct: 112 IFRSGIISIPAGQTEAGLSLGLSQKETMFSIVLPQALRNVLPAMGNEFITLIKESSVLFY 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +G  ++ +    +       I  +L+   IY  L+  +A  +  L  ++  K
Sbjct: 172 IGVQEITAEALGVGGTLYNFIPPLLVAAVIYFILTQAMAQLLGWLERRMGAK 223



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 50/117 (42%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y    L G   T  ++  G+I   +IG L+   R+S  K ++WI R Y+ + R 
Sbjct: 2   FDFLGQYWPLFLEGTAQTMIISIIGVIIGFLIGLLMVLMRMSKVKPISWIARAYIAIVRG 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            P ++ +  +Y  +   LP+P   I+      +    ++    +    A+IF    +
Sbjct: 62  TPSMIQVMLIYYLLARSLPLPQTQILGSGLDRIIPGAIALGLNSGAYTAEIFRSGII 118


>gi|114046424|ref|YP_736974.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           sp. MR-7]
 gi|113887866|gb|ABI41917.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella sp. MR-7]
          Length = 226

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG VL +  T L +   +   +    LY+   +I G P +V + + Y +
Sbjct: 30  VTLIVTFFAMLLGAVLGVGTT-LMKMSSKWYIRFPAELYVG--VIRGTPVVVQLVILYFI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +  +    +  +  IA    + A+I+EI+R+G+ AV +GQ EAA +LG
Sbjct: 87  ------------VLAALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     +L++LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +  
Sbjct: 135 LSQAMTMKLIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDS 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +     IYL L+      +++   ++   +
Sbjct: 195 IPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD 226



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  M+   ++G      ++S+   + +   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMLLGAVLGVGTTLMKMSSKWYIRFPAELYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VL+ 
Sbjct: 84  YFIVLAA 90


>gi|302548267|ref|ZP_07300609.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302465885|gb|EFL28978.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter, permease
           [Streptomyces himastatinicus ATCC 53653]
          Length = 261

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 22/214 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              F F  V G+VL+L      R       + L + YI  F       LV IAL + +  
Sbjct: 66  LLGFGFGLVAGLVLALM-----RLSQVPPYRWLSVAYIEFFR-GVPALLVFIALGFGVPL 119

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V               ++++ +AL    AA++AE +R+G+ AVP+GQMEAA +LG++
Sbjct: 120 AFQV-----------ALDRYVTVMLALGLVGAAYMAETIRAGIRAVPKGQMEAARSLGMS 168

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   +++PQA R ++PPLT++ + L K+SSL   +G +    +L   G   +NQ  +
Sbjct: 169 HGRAMVSIIIPQAFRIVLPPLTNELILLTKDSSLVYLLGLSLDQYELSKFGREALNQ-HR 227

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++  IL+    YL +++ +   +  L ++ A   
Sbjct: 228 SLTPILVAGLCYLLITVPLGQLVRWLESRTAKAR 261



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +    +NT      G     + G ++   RLS      W+   Y+E FR +P L+V   L
Sbjct: 54  LTTALLNTVVYTLLGFGFGLVAGLVLALMRLSQVPPYRWLSVAYIEFFRGVPALLVFIAL 113

Query: 149 YKSVLSVLPIPDHSIV 164
              V     +     V
Sbjct: 114 GFGVPLAFQVALDRYV 129


>gi|28897775|ref|NP_797380.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837351|ref|ZP_01990018.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|260363800|ref|ZP_05776555.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus K5030]
 gi|260876940|ref|ZP_05889295.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AN-5034]
 gi|260897918|ref|ZP_05906414.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus Peru-466]
 gi|28805988|dbj|BAC59264.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149749382|gb|EDM60155.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AQ3810]
 gi|308085473|gb|EFO35168.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus Peru-466]
 gi|308093859|gb|EFO43554.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AN-5034]
 gi|308113895|gb|EFO51435.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus K5030]
          Length = 225

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   S V+G+ +S+    ++R+            +I  F   G P L
Sbjct: 10  FPVYFQGLWTTVWLVGISLVIGLCVSVPL-AIARNSTNYALSLPSWGFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++     + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+SL+ +I     R   + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLTFIILWCFKRAEKRF 217



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 29/81 (35%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
               G   T WL    ++    +   +   R S N  ++     ++  FR  P LV ++ 
Sbjct: 12  VYFQGLWTTVWLVGISLVIGLCVSVPLAIARNSTNYALSLPSWGFIYFFRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFG 168
           +Y  +    P+ D      + 
Sbjct: 72  IYYGMDQFFPVKDTLWEHAWF 92


>gi|229174192|ref|ZP_04301727.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
 gi|228609313|gb|EEK66600.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
          Length = 226

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 11/231 (4%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + + +    +   +  +T+       + SFV+GI L++     +     K   ++  
Sbjct: 2   KFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKT-KNKTKFLYSIAR 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS F   G P LV +   + L+F  P +         TV     +  I LS   AA++
Sbjct: 61  VYISFF--RGTPLLVQL---FVLYFGLPQI-----FPTFTVLTAMQATLIGLSLNNAAYL 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R  L AV  GQM+A +++G+T+++A R ++ PQA+R  +P L + ++ LLK SSL+
Sbjct: 111 SEIIRGSLNAVESGQMDACLSVGMTNKQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLS 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            A+G A++++    +  Q+ + +E  L    +Y  ++I+I+    +L  K+
Sbjct: 171 FALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKL 221


>gi|221199371|ref|ZP_03572415.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD2M]
 gi|221205727|ref|ZP_03578742.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221211584|ref|ZP_03584563.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD1]
 gi|221168945|gb|EEE01413.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD1]
 gi|221174565|gb|EEE06997.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221180656|gb|EEE13059.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           multivorans CGD2M]
          Length = 229

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L+    T+         SF+LG+V +      ++    +    +  +Y  
Sbjct: 1   MFLQGYGPLILAGTWQTVKLAVLSLALSFLLGLVGA-----AAKLSRNRIANGVGTVY-- 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T LI G+P LVL+ L +        +              F++  + L     A+  E  
Sbjct: 54  TTLIRGVPDLVLMLLLFYSIQIWLNMATDALGWDQIDIDPFLAGVLVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   +G
Sbjct: 114 RGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            AD+V         T +     LI   IYL+++ +    +  L  + +   +K
Sbjct: 174 LADVVKASQDAGKGTLRFFFFTLIAGAIYLAITTISNFVLMWLEKRYSTGVRK 226



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +  + ++G +  A +LS N++   +  VY  + R +P LV+
Sbjct: 6   YGPLILAGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRIANGVGTVYTTLIRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|190892107|ref|YP_001978649.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190697386|gb|ACE91471.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 276

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 7/257 (2%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +  + L      +  +   ++V  +      R        +     +   S V G VLSL
Sbjct: 26  LSGYILVTFWALLAALLLFTVVNGWDPDKFTRYGPRYLHGLWITLSLVAISVVCGAVLSL 85

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGST 261
               ++R    +    L   YI  F   G P L  + L Y  L   +P L          
Sbjct: 86  PL-AMARLSKNRVLNWLAYGYIYFF--RGTPLLAQLFLVYYGLGVFRPQLEAVGIWW--F 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +     A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA  
Sbjct: 141 FRDAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHEAAAALGIHKVMAFRKIVLPQAFI 200

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             + P  ++ + L+K S++   +   DL+       ++T    +  L     YL++   +
Sbjct: 201 VALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFDY-QTYLWAAIFYLTIVEAL 259

Query: 382 ALFMNRLNAKIALKEKK 398
                 +  ++    K+
Sbjct: 260 RHLWAWIERRLTRHLKR 276



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 36/96 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L    ++   ++   +   RLS N+++ W+   Y+  FR  P L 
Sbjct: 57  RYGPRYLHGLWITLSLVAISVVCGAVLSLPLAMARLSKNRVLNWLAYGYIYFFRGTPLLA 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            +F +Y  +    P  +   +  F       GL   
Sbjct: 117 QLFLVYYGLGVFRPQLEAVGIWWFFRDAWYCGLFAM 152


>gi|87122497|ref|ZP_01078377.1| putative amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
 gi|86162290|gb|EAQ63575.1| putative amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
          Length = 216

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F N   L            +   +F+ G  ++L  T L R     T + +  +Y+  F  
Sbjct: 4   FTNYDILRNLLFATQWTIVLSFAAFIGGSSVALALTAL-RLTRNATVQKVVRIYVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  ++L+ +T+AF+ EI R  +
Sbjct: 61  QGTPLLMQMFLCF-----------FGLSMLGYEISAWGAAILSLTLFTSAFLVEIWRGCI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             +P+GQ EA+  LGL+  +  R ++LPQA+R   PP     + ++K ++LA  +GF +L
Sbjct: 110 DTLPKGQREASRCLGLSFLQTLRYIILPQAIRVATPPTVGFSVQVIKGTALASVIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             VG  + N T +  ++  +   IY  L   ++ +   L  K  +  
Sbjct: 170 TKVGTMLNNATFEPFKVFTLVALIYFLLCYPLSWYSKTLEKKFNVSR 216



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 1/110 (0%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ +T+       +L     T  L+F+  I  + +   + A RL+ N  V  + R+YVE+
Sbjct: 1   MIEFTNYD-ILRNLLFATQWTIVLSFAAFIGGSSVALALTALRLTRNATVQKVVRIYVEL 59

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
           F+  P L+ +F  +  +  +             + L              
Sbjct: 60  FQGTPLLMQMFLCFFGLSMLGYEISAWGAAILSLTLFTSAFLVEIWRGCI 109


>gi|300936885|ref|ZP_07151772.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300457996|gb|EFK21489.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 238

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA  V   DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTVTVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|54307243|ref|YP_128263.1| amino acid ABC transporter permease [Photobacterium profundum SS9]
 gi|46911663|emb|CAG18461.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 241

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 13/233 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
              ++ F        +      + T   + V+     +++++    L R +       L 
Sbjct: 15  QVAIMGFDFDYMLSLMPILMKYLGTTLSMAVWGLGFALIIAITL-ALVRVYKLPVLNQLS 73

Query: 221 LLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            LYIS F   G P LV + L Y  L    P+    +          F +  I LS + AA
Sbjct: 74  QLYISFF--RGTPLLVQLFLLYYGLPQVFPIFIGLD---------AFSAAVIGLSLHFAA 122

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE +R+ +I V R Q EA++A+G+T  +A R ++LPQA R  +P L + +++++K++S
Sbjct: 123 YMAESIRAAIIGVDRCQREASLAIGMTEMQAMRRIILPQATRIALPSLMNYFIDMIKSTS 182

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LA  +G A++++      + + +  E  L   FIY  L +++    N   AK+
Sbjct: 183 LAFTLGVAEIMAKAQMEASSSFKFFEAFLAVAFIYWGLVLVLTQVQNWAEAKL 235



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +A  G+  A II   +   R+    ++  + ++Y+  FR  P LV +F LY  +
Sbjct: 37  LGTTLSMAVWGLGFALIIAITLALVRVYKLPVLNQLSQLYISFFRGTPLLVQLFLLYYGL 96

Query: 153 LSVLP 157
             V P
Sbjct: 97  PQVFP 101


>gi|213970886|ref|ZP_03399009.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|213924409|gb|EEB57981.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 237

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S  L I+L L     ++       +    +Y  T LI G+P LVL+ L + 
Sbjct: 23  WMTIKLAVLSLALSILLGLVGAS-AKLSSSALLRVPAQIY--TTLIRGIPDLVLMLLIFY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +              F +  I L     A+  E  R  +++VPRGQ+EAA A 
Sbjct: 80  SLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVPRGQVEAATAY 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V+ PQ MR  +P + + +  LLK ++L   +G ADLV         T Q 
Sbjct: 140 GLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKASQDAGKSTYQL 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++   IYL ++      +       A   ++
Sbjct: 200 FYFLVLAALIYLMITSASNFALRWAERHYAAGSRE 234



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +  + +LS++ L+    ++Y  + R IP LV+
Sbjct: 14  FGPLLLEGTWMTIKLAVLSLALSILLGLVGASAKLSSSALLRVPAQIYTTLIRGIPDLVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 74  MLLIFYSLQTWLTMLTDAMEWEY 96


>gi|161503949|ref|YP_001571061.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865296|gb|ABX21919.1| hypothetical protein SARI_02041 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 238

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 12/223 (5%)

Query: 187 AKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
             + V + ++G+ L++F                       + LP + +  F+ FG   L+
Sbjct: 15  VGLAVCALIIGLALAMFFAVWESIKWRPIAWIGSALVTILRGLPEILVVLFIYFGSSQLL 74

Query: 237 L-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L ++    L+     +     I    VSP F+   +ALS   AA+ ++ +R  L A+P G
Sbjct: 75  LTLSDGVTLNLGFAQIPVQMEIENFDVSP-FLCGVVALSLLYAAYASQTLRGALKAIPSG 133

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +
Sbjct: 134 QWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKS 193

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I  +T       ++   IYL ++++    + R++ +    E++
Sbjct: 194 IATRTQDPFNWYILAAAIYLVITLISQYILKRIDLRATRFERR 236


>gi|187478360|ref|YP_786384.1| ABC transporter permease [Bordetella avium 197N]
 gi|115422946|emb|CAJ49475.1| ABC transporter, permease protein [Bordetella avium 197N]
          Length = 217

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 90/176 (51%), Gaps = 9/176 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+    +L+ G P ++ +   Y      PV+            P+F +  +A +   AA+
Sbjct: 50  LVNAYIWLMRGTPLMLQLLFIYFALPFVPVI--------GVRLPDFPAAIVAFALNYAAY 101

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI R+G+++V RGQ E +  LG+++ +  R ++LPQ ++ ++PP++++ + L+K++SL
Sbjct: 102 FAEIFRAGILSVDRGQYEGSKVLGMSYLQTMRRIVLPQMVQRVLPPMSNETITLVKDTSL 161

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   D++     I+ +        L+    YL +++++  F   L  + A  +
Sbjct: 162 IYVLALNDILRTARGIVQRDF-TTTPFLVAAAFYLLMTLVLTWFFQHLEKRYAKYD 216


>gi|295675885|ref|YP_003604409.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295435728|gb|ADG14898.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 229

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ VFS  L  VL L     ++    +    +  +Y  T L+ G+P LVL+ L + 
Sbjct: 15  WQTVKLAVFSLALAFVLGLLGAA-AKLSKNRLSNGVGTVY--TTLVRGVPDLVLMLLLFY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F++    L     A+  E  R   +AVPRGQ+EA  A 
Sbjct: 72  SIQIWLNNLTDAMGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +    V+ PQ MR  +P + + +  ++K ++L   +G AD+V         T + 
Sbjct: 132 GMTSWQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVKASQDAGKGTLRF 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L+   IYL ++ +    +  L  + +   +K
Sbjct: 192 FFFTLLAGAIYLVITTVSNFVLMYLEKRYSTGVRK 226



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  LA   +  A ++G L  A +LS N+L   +  VY  + R +P LV+
Sbjct: 6   YGPLLLSGTWQTVKLAVFSLALAFVLGLLGAAAKLSKNRLSNGVGTVYTTLVRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|169351674|ref|ZP_02868612.1| hypothetical protein CLOSPI_02455 [Clostridium spiroforme DSM 1552]
 gi|169291896|gb|EDS74029.1| hypothetical protein CLOSPI_02455 [Clostridium spiroforme DSM 1552]
          Length = 238

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 100/226 (44%), Gaps = 11/226 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                          +I V   ++G  + L    L       T +A+ +      +I  L
Sbjct: 9   WEIFVSNFPQFLYGIEITVLYAIVGTAIGLLIGLLVG-----TIRAIEINEQDPVIIKSL 63

Query: 233 PTLVLIALKYQL--HFDKPVLGQFNFIGG----STVSPEFMSLYIALSCYTAAFIAEIVR 286
             ++ +   + L      P+L Q  F+              +  + +S  T A++AEI+R
Sbjct: 64  KKILKLITGFYLWVFRGTPMLVQAMFLYYLLKPILGWTGITAGLVIISINTGAYMAEIIR 123

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ +V  GQ EAA ++G++  +  R ++LPQA+++  P + +Q +  +K+SS+   +  
Sbjct: 124 SGIQSVDIGQTEAAKSIGMSTVQTFRKIVLPQAIKNSFPSIGNQLIINIKDSSMLNVISV 183

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++     +I   T Q  E   I M IYL L+ + +L MN    ++
Sbjct: 184 TEVYFQSTSIAGSTYQYTETFFITMIIYLILTTIASLIMNYFERRM 229


>gi|315925537|ref|ZP_07921747.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621078|gb|EFV01049.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 216

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 14/207 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + S  LG  +++           +  KA+  +Y+  +++ G P L+ +   Y  
Sbjct: 21  LFAICLIVSLPLGFGITMML-----RSRVRPVKAIAEIYV--YILRGTPLLLQLFFVY-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P +     IG   +   F +  +A +   AA+ AEI R GL+A+  GQ EAA  LG
Sbjct: 72  -FGLPFIPG---IGKVLMFDRFTAACVAFALNYAAYFAEIFRGGLLAINDGQYEAAKVLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    +++PQ +R  +P ++++ + L+K+++L  A+   +++      + +     
Sbjct: 128 LTRGQTMLHIIIPQMIRVSLPSVSNETIVLVKDTALVTAIAVPEIMYYAKGAVVRDADT- 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++   IYL ++ +I L   +L  K
Sbjct: 187 TAFIVAGGIYLVINFVITLIFKQLEKK 213



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 36/84 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +  T+I+ G   T  L    +I +  +G  +     S  + V  I  +YV + R  P L+
Sbjct: 6   TLLTSIMAGLGKTLSLFAICLIVSLPLGFGITMMLRSRVRPVKAIAEIYVYILRGTPLLL 65

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPF 167
            +FF+Y  +  +  I    +   F
Sbjct: 66  QLFFVYFGLPFIPGIGKVLMFDRF 89


>gi|213970849|ref|ZP_03398972.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301384515|ref|ZP_07232933.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060677|ref|ZP_07252218.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302130492|ref|ZP_07256482.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213924372|gb|EEB57944.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 248

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +   Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRL-----VSGISTAYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPADLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGISTAYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPADLQEWYKQD 103


>gi|119873304|ref|YP_931311.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum islandicum DSM 4184]
 gi|119674712|gb|ABL88968.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum islandicum DSM 4184]
          Length = 229

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 12/230 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +      L++    + T   + + SFV+G+VL      L R F  K    L   Y+  
Sbjct: 1   MALEHYIEALAYVVGGVPTTLSLALLSFVIGLVLGSILL-LIRFFLPKPLPWLASAYVEA 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P LV I + Y            N          F +  IAL   +AA+ AEI R
Sbjct: 60  F--RGTPLLVQIFIIYFGVGGYLKDYGINI-------DPFTAGVIALGLNSAAYQAEIFR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S + A+P  Q   A A   T  +  R ++LPQA+R  IP L ++ + L+K+SSL   +G 
Sbjct: 111 SAVQAIPLEQYLTAEAYAFTKTQTFRYIILPQALRIAIPALMNELVLLIKDSSLVAVIGV 170

Query: 347 --ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              D+               E  L    IY  +   +    + +  K A+
Sbjct: 171 TPPDIFRRADYYAASKFAYFEAYLAAATIYFIICYTMVKISHYIERKYAI 220



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T  LA    +   ++G+++   R    K + W+   YVE FR  P LV IF 
Sbjct: 12  YVVGGVPTTLSLALLSFVIGLVLGSILLLIRFFLPKPLPWLASAYVEAFRGTPLLVQIFI 71

Query: 148 LYKSV 152
           +Y  V
Sbjct: 72  IYFGV 76


>gi|70728646|ref|YP_258395.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68342945|gb|AAY90551.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 242

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 2/196 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                ++       +    LY  T LI G+P LVL+ L +                    
Sbjct: 46  LIGASAKLSSVALLRVPAQLY--TTLIRGVPDLVLMLLIFYSLQTWLTSFTDFMEWDYIE 103

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  I L     A+  E  R  ++AVPRGQ+EAA A GL   +  R V+ PQ MR 
Sbjct: 104 INPFSAGVITLGFIYGAYFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRF 163

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P + + ++ +LK ++L   +G ADLV         T Q    +++   IYL ++    
Sbjct: 164 ALPGIGNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASN 223

Query: 383 LFMNRLNAKIALKEKK 398
             + RL  + A   ++
Sbjct: 224 FVLRRLERRYAAGARE 239


>gi|261220512|ref|ZP_05934793.1| amino acid ABC transporter permease [Brucella ceti B1/94]
 gi|265996140|ref|ZP_06108697.1| amino acid ABC transporter permease [Brucella ceti M490/95/1]
 gi|260919096|gb|EEX85749.1| amino acid ABC transporter permease [Brucella ceti B1/94]
 gi|262550437|gb|EEZ06598.1| amino acid ABC transporter permease [Brucella ceti M490/95/1]
          Length = 250

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L +       +      P         M  +   L +  L       +  F+F L + L
Sbjct: 4   LLCMFIPARFIIPITAKEPKLVPDWFQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGL 63

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
                RL   F      ++   Y+  F   G P LV + + +                  
Sbjct: 64  LTALVRL---FAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIG 107

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA 
Sbjct: 108 IYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQAT 167

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +PPL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +
Sbjct: 168 RTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSI 227

Query: 381 IALFMNRLNAKIALK 395
           ++    RL  +    
Sbjct: 228 LSALQVRLERRFGRY 242



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 33  ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 92

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 93  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 123


>gi|261819590|ref|YP_003257696.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261603603|gb|ACX86089.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 221

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           + P+   + +   S  +  +     + + SF+ G+ L +    L R +  K  K L   Y
Sbjct: 1   MPPWLQLMADSFWSLLSAGLKFTVPLAILSFIFGLALGILI-ALVRLYGPKPLKWLGDFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  +    A+ +E
Sbjct: 60  V--WVIRGTPLLVQLFLIFY-----------GLPSAGITLDAFPAALIGFTVSVGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  +++VP+GQ  AA +LG+  R+A R V+ PQ++   +PPL++ +++L+K++SLA  
Sbjct: 107 IVRGAILSVPKGQWSAAYSLGMNGRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I++ T + + + +    IYL  S +++    +L      
Sbjct: 167 ITVPEMFLSAQRIVSVTYEPLILYVEAALIYLMFSTVLSQLQVKLEKYYQR 217



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+ + +  G   T  LA    I    +G L+   RL   K + W+   YV V R  P 
Sbjct: 9   ADSFWSLLSAGLKFTVPLAILSFIFGLALGILIALVRLYGPKPLKWLGDFYVWVIRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S     D       G  ++
Sbjct: 69  LVQLFLIFYGLPSAGITLDAFPAALIGFTVS 99


>gi|261406922|ref|YP_003243163.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261283385|gb|ACX65356.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 261

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 7/231 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           PF        L     T+     I   S ++GIV+  F   L R +      A  ++YIS
Sbjct: 4   PFDYSYVFSFLPKLLSTLGVTMLIVAGSLLVGIVVG-FLVALPRLYRIPMLNAFSMVYIS 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P L+ + L Y   +  P + +   I  S  +P  + + +    +T AF++E++
Sbjct: 63  FF--RGTPILIQLFLFY---YGLPEMLKLVHIDLSR-APVMVFVILTYGLHTGAFMSEMI 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+ + AV RGQ+EAA A+G+   +A   ++LPQA+   +P  ++  + LLK++SLA  +G
Sbjct: 117 RASVTAVDRGQVEAAYAMGMKGHQAFLRIVLPQALAIAVPVFSNMVIALLKDTSLAFTLG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++     T+ N T   IE  L   FIYL +S  +   + R   ++   E
Sbjct: 177 LMEMTGKAQTLGNITQHFIEAYLALAFIYLVISFTLEKLLLRAERRLMRHE 227



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 32/81 (39%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
               Y+   S+   +L     T  +    ++   ++G LV   RL    ++     VY+ 
Sbjct: 3   APFDYSYVFSFLPKLLSTLGVTMLIVAGSLLVGIVVGFLVALPRLYRIPMLNAFSMVYIS 62

Query: 135 VFRNIPPLVVIFFLYKSVLSV 155
            FR  P L+ +F  Y  +  +
Sbjct: 63  FFRGTPILIQLFLFYYGLPEM 83


>gi|13470760|ref|NP_102329.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
 gi|14021503|dbj|BAB48115.1| probable permease of ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 273

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 7/259 (2%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P +V + L    ++        +V  +      +        +     +   S VLG VL
Sbjct: 21  PRIVGYALVCLWIAFGLGIVGYLVFAWNPVFFAKYAPAYLSGLGVTLSLVAISMVLGAVL 80

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGG 259
           S       R    +    L   Y+  F   G P LV   L Y  L   +P L        
Sbjct: 81  S-MPVAYGRMSRNRILSGLAYCYVYFF--RGTPLLVQTFLIYYGLGSFRPELQMIGL--W 135

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                 F     A +  TAA+ AEI+R  + +V RGQ E A +LGL   +  R ++LPQA
Sbjct: 136 DFFKDAFNCGVFAFALNTAAYQAEILRGAIESVHRGQWEGAASLGLHKLQTLRKIILPQA 195

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +   + P  ++ + ++K S++   +   DL+         +   I+  +    +YL +  
Sbjct: 196 LIVALRPYGNELILMVKASAIVAIITVYDLMGNAKLAFANSFD-IQAYIWVALVYLVMVE 254

Query: 380 MIALFMNRLNAKIALKEKK 398
           ++   +  +  +I +  K+
Sbjct: 255 LLRHAIEWIERRITIHLKR 273



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 37/84 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA A L G   T  L    M+   ++   V  GR+S N++++ +   YV  FR  P LV 
Sbjct: 55  YAPAYLSGLGVTLSLVAISMVLGAVLSMPVAYGRMSRNRILSGLAYCYVYFFRGTPLLVQ 114

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
            F +Y  + S  P      +  F 
Sbjct: 115 TFLIYYGLGSFRPELQMIGLWDFF 138


>gi|196045258|ref|ZP_03112490.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus 03BB108]
 gi|196023842|gb|EDX62517.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus 03BB108]
          Length = 230

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|254975774|ref|ZP_05272246.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255093161|ref|ZP_05322639.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
 gi|255314903|ref|ZP_05356486.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255517577|ref|ZP_05385253.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255650688|ref|ZP_05397590.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|260683775|ref|YP_003215060.1| putative amino-acid ABC transporter permease [Clostridium difficile
           CD196]
 gi|260687435|ref|YP_003218569.1| putative amino-acid ABC transporter permease [Clostridium difficile
           R20291]
 gi|306520613|ref|ZP_07406960.1| putative amino-acid ABC transporter, permease protein [Clostridium
           difficile QCD-32g58]
 gi|260209938|emb|CBA63911.1| probable amino-acid ABC transporter, permease protein [Clostridium
           difficile CD196]
 gi|260213452|emb|CBE05129.1| probable amino-acid ABC transporter, permease protein [Clostridium
           difficile R20291]
          Length = 222

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 117/233 (50%), Gaps = 15/233 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +    F + +    +    +T+  +   F  S +LG++L+ F    S     K  + + 
Sbjct: 2   SNFNFEFCLSIFPFLIKALGITILISIVAFFLSILLGVILAFFTQTKS-----KVLQYIT 56

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +Y+S F   G P L+ I   Y   F  P++  F           ++++ I L   ++A+
Sbjct: 57  RVYVSFF--RGTPLLIQIFFFY---FGFPMIFSF-----MKDCSPYLAIVICLGVNSSAY 106

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EI+R+ + +V +GQ EA  A GL+  ++   ++LPQA  S +PP+ S  L+++K SSL
Sbjct: 107 MTEIIRASIESVDKGQQEACYAFGLSKYQSMVKIILPQAATSAVPPIVSCTLDIIKGSSL 166

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + +G  DL+ V       + +  EI +I + IY ++SI+++   +++  +I 
Sbjct: 167 GLTIGIQDLMGVAQVEAASSFKYFEIYMITILIYWAVSIILSNIQSKVEKRIG 219



 Score = 43.0 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 33/78 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    ++     T  ++      + ++G ++     + +K++ +I RVYV  FR  P L+
Sbjct: 11  SIFPFLIKALGITILISIVAFFLSILLGVILAFFTQTKSKVLQYITRVYVSFFRGTPLLI 70

Query: 144 VIFFLYKSVLSVLPIPDH 161
            IFF Y     +      
Sbjct: 71  QIFFFYFGFPMIFSFMKD 88


>gi|67639860|ref|ZP_00438690.1| histidine transport system permease protein HisQ [Burkholderia
           mallei GB8 horse 4]
 gi|121600455|ref|YP_992327.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124385405|ref|YP_001028961.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126449260|ref|YP_001081124.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|166999939|ref|ZP_02265768.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei PRL-20]
 gi|254177473|ref|ZP_04884128.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei ATCC 10399]
 gi|254199421|ref|ZP_04905787.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei FMH]
 gi|254205736|ref|ZP_04912088.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei JHU]
 gi|254357893|ref|ZP_04974166.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei 2002721280]
 gi|121229265|gb|ABM51783.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124293425|gb|ABN02694.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126242130|gb|ABO05223.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|147749017|gb|EDK56091.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei FMH]
 gi|147753179|gb|EDK60244.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei JHU]
 gi|148027020|gb|EDK85041.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei 2002721280]
 gi|160698512|gb|EDP88482.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei ATCC 10399]
 gi|238520468|gb|EEP83928.1| histidine transport system permease protein HisQ [Burkholderia
           mallei GB8 horse 4]
 gi|243064057|gb|EES46243.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           mallei PRL-20]
          Length = 229

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        LS    T+         SF+LG+V +      ++    +    +  LY  
Sbjct: 1   MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGA-----AAKLSRSRVSNGIGTLY-- 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T LI G+P LVL+ L +                       F +  + L     A+  E  
Sbjct: 54  TTLIRGVPDLVLMLLLFYSLQIWLNQLTDLMNWDQIDIDPFAAGVLVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   ++VPRGQ+EA  A G+T+ +    V+ PQ MR  +P + + +  L+K+++L   +G
Sbjct: 114 RGAFLSVPRGQLEAGSAYGMTNWQVFARVMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            AD+V         T +     L+   IYL+++ +    +  L  + +   +K
Sbjct: 174 LADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRK 226



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +  + ++G +  A +LS +++   I  +Y  + R +P LV+
Sbjct: 6   YGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSRSRVSNGIGTLYTTLIRGVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +  L+ S+   L      +   
Sbjct: 66  MLLLFYSLQIWLNQLTDLMNWD 87


>gi|324991996|gb|EGC23918.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
          Length = 286

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 16/268 (5%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV   +   ++    Y+  L ++P       L          L    +T+       VF 
Sbjct: 15  EVIIVVTTYLLTTGWYEEFLKIIPDGK-LFSLRAVFEAIPGILQNLPITLLLTVGGAVFG 73

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251
            +L +V ++      +  +       P+       + G P LV + L Y   F  P+L  
Sbjct: 74  IMLAMVFAVVKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLK 123

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               Q+         P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T++
Sbjct: 124 AINQQYGTSFNINDIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNK 183

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++P A     P L +  + L K +SLA + G  ++ +    I     +  E  +
Sbjct: 184 QVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFI 243

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               IY +++I+I      +   + +K+
Sbjct: 244 SVSLIYWAVNILIEQLGRWIEKMMDIKQ 271


>gi|306829197|ref|ZP_07462387.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus mitis ATCC 6249]
 gi|304428283|gb|EFM31373.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus mitis ATCC 6249]
          Length = 227

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +     G +L +     ++    K       +Y+  F   G 
Sbjct: 7   PKYLPYFNYGALITVVISILVVFFGTILGVLL-AFAQRSRFKPLVWFANVYVWIF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 64  PMMVQIMIAFALMHIDAPTIQVGILG--VDLSRLIPGILIISMNSGAYVSETVRAGINAV 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL  A+G  +L + 
Sbjct: 122 PKGQLEAAYSLGIRPKNAMRYVILPQAIKNILPALGNEFITIIKDSSLLSAIGVMELWNG 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             T+   T   +  +L   F YL ++ ++ + +      I   +KK
Sbjct: 182 ATTVATTTYLPLTPLLFAAFYYLIMTSILTVALKAFENYIGQGDKK 227



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  ++   +   TI+G L+   + S  K + W   VYV +FR  P +V 
Sbjct: 9   YLPYFNYGALITVVISILVVFFGTILGVLLAFAQRSRFKPLVWFANVYVWIFRGTPMMVQ 68

Query: 145 IFFLYKSV 152
           I   +  +
Sbjct: 69  IMIAFALM 76


>gi|161524064|ref|YP_001579076.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189351175|ref|YP_001946803.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|160341493|gb|ABX14579.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189335197|dbj|BAG44267.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 229

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L+    T+         SF+LG+V +      ++    +    +  +Y  
Sbjct: 1   MFLQGYGPLILAGTWQTVKLAVLSLALSFLLGLVGA-----AAKLSRNRIANGVGTVY-- 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T LI G+P LVL+ L +        +              F++  + L     A+  E  
Sbjct: 54  TTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQIDIDPFLAGVLVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   +G
Sbjct: 114 RGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            AD+V         T +     LI   IYL+++ +    +  L  + +   +K
Sbjct: 174 LADVVKASQDAGKGTLRFFFFTLIAGAIYLAITTISNFVLMWLEKRYSTGVRK 226



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +  + ++G +  A +LS N++   +  VY  + R +P LV+
Sbjct: 6   YGPLILAGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRIANGVGTVYTTLIRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSL 73


>gi|322411345|gb|EFY02253.1| amino acid ABC transporter, permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 233

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 15/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+  +    + + VLG+++   +T       +K  + +  +Y+      
Sbjct: 21  HFPLFLKAFLYTLGVSLAALLLAMVLGVIIGGLSTA-----KQKGSRIVSRMYVEF--YQ 73

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P LV +   Y                G  +   FM+    +  Y AA+IAE++RSG+ 
Sbjct: 74  NTPLLVQVVFMYYGLAIMS--------KGFIMPSAFMTTVCCVGLYHAAYIAEVIRSGIE 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EAA++ G T  +   L+++PQA+R+I+PPLT+Q +NL+KN+S+   +  ADL+
Sbjct: 126 AVPKGQTEAALSQGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLM 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                    T   +       F+Y  L   IA+F  R   +
Sbjct: 186 FTAKVWAYDTTYYVPAFAGAAFLYFILCFPIAIFGRRQEER 226



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 41/78 (52%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +T+  ++    L  F+ T  ++ + ++ A ++G ++G    +  K    + R+YVE
Sbjct: 11  ALPQWTAFFNHFPLFLKAFLYTLGVSLAALLLAMVLGVIIGGLSTAKQKGSRIVSRMYVE 70

Query: 135 VFRNIPPLVVIFFLYKSV 152
            ++N P LV + F+Y  +
Sbjct: 71  FYQNTPLLVQVVFMYYGL 88


>gi|295704150|ref|YP_003597225.1| sulfur-containing amino acid ABC transporter permease TcyL
           [Bacillus megaterium DSM 319]
 gi|294801809|gb|ADF38875.1| sulfur-containing amino acid ABC transporter, permease protein TcyL
           [Bacillus megaterium DSM 319]
          Length = 232

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 7/231 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + L    +      +     I + S V+G  L LF   L R +       +  +YIS 
Sbjct: 5   FDIELIFTSIPQLLSYLHITIWILIASLVIGSTLGLFI-ALPRIYKVPVLSQIAAVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P L+ + L +   +  P L Q   I  S ++P  + + I  S  TAA  +E++R
Sbjct: 64  --MRGTPILIQLFLVF---YGIPALLQLIHIDVSRMAP-LVFVIITYSLSTAASFSEMMR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +V +GQ EAA ++G++ ++    ++LPQA     P   +  +  LK++SLA  +G 
Sbjct: 118 GAINSVDKGQTEAAYSIGMSGKQTFTRIVLPQAFVVAFPNFGNLVIGSLKDTSLAFTIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++  G TII  T  A+E+ +    IY  ++I++  F  +   K+   ++
Sbjct: 178 MDMMGRGDTIIAATAHAVEVYIALAIIYYLVAIILEKFFVKSEQKLQKHDQ 228



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T W+  + ++  + +G  +   R+    +++ I  VY+   R  P L+ +F +
Sbjct: 17  LLSYLHITIWILIASLVIGSTLGLFIALPRIYKVPVLSQIAAVYISFMRGTPILIQLFLV 76

Query: 149 YKSVL 153
           +  + 
Sbjct: 77  FYGIP 81


>gi|294632492|ref|ZP_06711052.1| amino acid ABC transporter, permease [Streptomyces sp. e14]
 gi|292835825|gb|EFF94174.1| amino acid ABC transporter, permease [Streptomyces sp. e14]
          Length = 333

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 6/196 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIA-----LKYQLHFDKPVLGQFNFIGGSTVS 263
           R       +A+  LY+  F    L  +++       L   L    P    F     S ++
Sbjct: 111 RLSRSPVLRAVGWLYVWAFRSIPLIVVLIFLYNFSALYQTLSVGVPFGPAFFRFDESRLA 170

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
            + +   + LS   AA+ AE+VR G+++V +GQ EAA ALGL        ++LPQA+RSI
Sbjct: 171 TDMVVAVVGLSLNEAAYAAEVVRGGVLSVDQGQHEAAAALGLPRGYRFTRIVLPQALRSI 230

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIA 382
           +P   +Q + L+K +SL   V   DL     T+ +   G  + ++L+    YL L+ + +
Sbjct: 231 VPNYVNQLIGLVKATSLVFYVSLLDLFGTAQTMGSTYPGDIVPLLLVVTVWYLILTSLFS 290

Query: 383 LFMNRLNAKIALKEKK 398
           +    +    A    +
Sbjct: 291 VAQFYVERHYARGATR 306



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 51/146 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + T  +     +   + G L+   RLS + ++  +  +YV  FR+IP +VV+ FL
Sbjct: 82  ILDGLLVTLEVTALSAVLGLLGGVLLALARLSRSPVLRAVGWLYVWAFRSIPLIVVLIFL 141

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y        +       P     +   L+   +       +   ++   +V     +   
Sbjct: 142 YNFSALYQTLSVGVPFGPAFFRFDESRLATDMVVAVVGLSLNEAAYAAEVVRGGVLSVDQ 201

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPT 234
                     LP  Y  T ++     
Sbjct: 202 GQHEAAAALGLPRGYRFTRIVLPQAL 227


>gi|229182749|ref|ZP_04309989.1| Amino acid ABC transproter, permease [Bacillus cereus BGSC 6E1]
 gi|228600722|gb|EEK58302.1| Amino acid ABC transproter, permease [Bacillus cereus BGSC 6E1]
          Length = 233

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 44  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 89

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 90  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLG 149

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 150 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 209

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 210 EKRLQRKE 217


>gi|186473936|ref|YP_001861278.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196268|gb|ACC74232.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 567

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 91/221 (41%), Gaps = 14/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL---LYISTFLI 229
            + L+    +       +V   +  I +S+           +  +   L    +   + +
Sbjct: 39  FKELAAYVGSPFLLGGAWVAVKITLIAMSIGLVLGLGLALMRLSRFRALDSAAWSYIWFV 98

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +       FD   L    F        E  +  I  +   AAF AE+ R+G+
Sbjct: 99  RGTPQLLQLVFI----FDALPLIGLRF-------DEVTTAVIGFALNEAAFSAELFRAGI 147

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V R Q  AA ALG+      R ++LPQ+MR++IP L +  + +LK +S+A  +   +L
Sbjct: 148 LSVNRSQSTAAAALGMGPLLTLRRIVLPQSMRAVIPGLANDTIGMLKLTSIASVIFVNEL 207

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                 ++ Q  +   +      IYL L+  ++L    L  
Sbjct: 208 TFRSQQVVGQNFKFFTVFGAAAVIYLILTSGVSLLQVWLER 248



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 6/211 (2%)

Query: 68  AGFEIDQGIVPYTSDSSY--ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           AG +  Q +  +   ++Y  +  +L G      +    M    ++G  +   RLS  + +
Sbjct: 28  AGLDRVQVLDGFKELAAYVGSPFLLGGAWVAVKITLIAMSIGLVLGLGLALMRLSRFRAL 87

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
                 Y+   R  P L+ + F++ ++  +    D       G  LN    S        
Sbjct: 88  DSAAWSYIWFVRGTPQLLQLVFIFDALPLIGLRFDEVTTAVIGFALNEAAFSAELFRAGI 147

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQL 244
            +     S     +       L R    ++ +A +P L   T  +  L ++  +    +L
Sbjct: 148 LSVNRSQSTAAAALGMGPLLTLRRIVLPQSMRAVIPGLANDTIGMLKLTSIASVIFVNEL 207

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            F    +   NF   +       +  I L  
Sbjct: 208 TFRSQQVVGQNFKFFTVFG---AAAVIYLIL 235


>gi|329116355|ref|ZP_08245072.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326906760|gb|EGE53674.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 229

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 119/236 (50%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +T+  +  +  F  +LGI+++       +       K L   
Sbjct: 1   MNFSFLPHYWGYFNYGVLVTIFISIAVVFFGTILGIIITFL-----KRSSILPLKWLASF 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF++  +  F  +  +      +   I +S  + A+I
Sbjct: 56  YVWIF--RGTPMVVQIMIAFAWMHFNQMPIIDFGVL--NLDFSRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP GQ+EAA +LG+  + A R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPAGQLEAAYSLGIRPKNAMRFVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G  +L +   +++  T Q I  +L   F YL ++ +++  ++ L  K+    K
Sbjct: 172 QTIGVMELWNGAQSVVTSTYQPITPLLFGAFYYLMVTTVMSQLLHLLEKKMGQGVK 227



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 47/142 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T +++ + +   TI+G ++   + S+   + W+   YV +FR  P +V 
Sbjct: 9   YWGYFNYGVLVTIFISIAVVFFGTILGIIITFLKRSSILPLKWLASFYVWIFRGTPMVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I   +  +           VL         G+   +L         V + +  +      
Sbjct: 69  IMIAFAWMHFNQMPIIDFGVLNLDFSRLLPGIIIISLNSGAYISEIVRAGIEAVPAGQLE 128

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
              S     K      +L  + 
Sbjct: 129 AAYSLGIRPKNAMRFVILPQAF 150


>gi|328462014|gb|EGF34198.1| glutamine ABC transporter permease [Lactobacillus helveticus MTCC
           5463]
          Length = 175

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 13/180 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K GK +  +YI+ F    +P LV++ + Y +                     F +  I L
Sbjct: 8   KFGKIVAKVYIAIF--RNIPLLVIVMIFYLI-----------VPRYIVKLSGFQAGTIGL 54

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + YT+AFIAE VR+G+ ++  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++N
Sbjct: 55  TLYTSAFIAETVRAGISSISTGQMEGARSNGMTYTQAMRYVILPQAMKIVIPPLGNQFVN 114

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+KNSS+   V   DL+     I   T + I+  ++    YL L++ ++ +M  L  K+A
Sbjct: 115 LVKNSSVLAFVAGFDLMYQAQLIAFSTFRTIDTYVVVGLFYLILTLPLSYYMRHLEKKLA 174


>gi|27365437|ref|NP_760965.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|27361585|gb|AAO10492.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus
           CMCP6]
          Length = 227

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T A +   S V+G+ +++    ++R+            YI  F   G P L
Sbjct: 12  FPIYLDGLWTTAWLVAVSLVIGLGIAIPL-AVARNSRNYVVSLPAWGYIYFF--RGTPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 69  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++H    R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 123 EVEAAKAYGMSHWMTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTIIDLTGAARL 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+SL+ +I         + 
Sbjct: 183 VNSRYYAPFESFLTAGLFYMSLTFLILWVFKNAEKRF 219



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++    I   +   R S N +V+     Y+  FR  P LV ++ +
Sbjct: 15  YLDGLWTTAWLVAVSLVIGLGIAIPLAVARNSRNYVVSLPAWGYIYFFRGTPLLVQLYLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y  +    P+ D      + 
Sbjct: 75  YYGMDQFFPVKDTLWENAWF 94


>gi|307248651|ref|ZP_07530665.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306854862|gb|EFM87051.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 138

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 65/127 (51%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R  +PPL
Sbjct: 8   AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPL 67

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY      + L   +
Sbjct: 68  SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWGLFLIQAK 127

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 128 LERRFNR 134


>gi|300311602|ref|YP_003775694.1| glutamine ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300074387|gb|ADJ63786.1| ABC-type glutamine transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 221

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 96/177 (54%), Gaps = 11/177 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I   L+ G P LV + L +           F       + P ++   + L  Y+ A+
Sbjct: 55  LCTIYLTLVRGTPLLVQLFLWF-----------FGLPHVGVILPAYVCGILGLGIYSGAY 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++EIVR  + ++ RGQMEAA +LGL +R A R V+LPQA   +IPPL ++++ L+KNS+L
Sbjct: 104 VSEIVRGAIQSIERGQMEAARSLGLPYRMAMRRVILPQAFVRMIPPLGNEFIALIKNSAL 163

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +  ADL+  G  II+ T +++E  L    IYL L+ +  L + R+   +  + +
Sbjct: 164 VSLLTIADLMHEGEKIISVTYRSLETYLAIALIYLLLTSVTTLILRRVEKVLRSEGR 220


>gi|296102233|ref|YP_003612379.1| amino acid ABC transporter, inner membrane subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295056692|gb|ADF61430.1| amino acid ABC transporter, inner membrane subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 312

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 1/264 (0%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +  +V +F L   V SV   P     +    F +   L     T+         S +
Sbjct: 16  LRAVGAVVALFVLAVVVQSVAFNPRWEWSVFARWFFDPVILEGVGQTLLLTLIGTALSVI 75

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQF 254
           LG +L+L     S          + L      ++  +       L   L    P     +
Sbjct: 76  LGGMLALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTGMTW 135

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  V  +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  +
Sbjct: 136 GSFETINVLGQFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTVRI 195

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R+I+P   ++ ++L K +++   +   +L      I N+T + I ++++    Y
Sbjct: 196 ILPQALRTILPSGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWY 255

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ +++     +   +A  E++
Sbjct: 256 LVITTVLSAIQYGVERGLARSERR 279


>gi|10954822|ref|NP_053242.1| hypothetical protein pTi-SAKURA_p003 [Agrobacterium tumefaciens]
 gi|16119837|ref|NP_396542.1| ABC transporter, membrane spanning protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
 gi|548381|sp|P35113|NOCM_AGRT5 RecName: Full=Nopaline transport system permease protein nocM
 gi|154755|gb|AAA50513.1| transport protein [Agrobacterium tumefaciens]
 gi|6498175|dbj|BAA87627.1| tiorf2 [Agrobacterium tumefaciens]
 gi|15163491|gb|AAK90983.1| ABC transporter, membrane spanning protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
          Length = 241

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 4/206 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +   S ++G V+S+    L R    +   +L   Y+  ++I   P LV + L Y 
Sbjct: 18  PTTLTLAFISLLIGFVVSV-PVALMRLSKNRIVSSLAYGYV--YIIRSTPLLVQMFLIYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +     +  S   P F    +AL+  TAA+ +EI+R G+ +V  GQ+EAA A+
Sbjct: 75  GSAQFRGVLSEVGLWSSFREPWF-CAILALALNTAAYTSEIIRGGIQSVSLGQIEAARAV 133

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++     R ++ P A+R  +P   ++ + ++K++SLA  +   ++  +   II+ T   
Sbjct: 134 GMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGLAKQIISATYSP 193

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLN 389
           +E+ ++   IYL ++ +++  +    
Sbjct: 194 VEVFIVAGAIYLFITFVVSRLVMLAE 219



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  LAF  ++   ++   V   RLS N++V+ +   YV + R+ P LV +F +
Sbjct: 13  LLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPLLVQMFLI 72

Query: 149 YKSVLSVL 156
           Y       
Sbjct: 73  YYGSAQFR 80


>gi|328473249|gb|EGF44097.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 225

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   S V+G+ +S+    ++R+            +I  F   G P L
Sbjct: 10  FPVYLQGLWTTVWLVGISLVIGLCVSVPL-AIARNSTNYALSLPSWGFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++     + ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSKFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+SL+ +I     R   + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLTFIILWCFKRAEKRF 217



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++    +   +   R S N  ++     ++  FR  P LV ++ 
Sbjct: 12  VYLQGLWTTVWLVGISLVIGLCVSVPLAIARNSTNYALSLPSWGFIYFFRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFG 168
           +Y  +    P+ D      + 
Sbjct: 72  IYYGMDQFFPVKDTLWEHAWF 92


>gi|330811360|ref|YP_004355822.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379468|gb|AEA70818.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 248

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      ++ + +LG VL +      R    +    +   Y+  F    +P
Sbjct: 24  WYVTGLGWTIAIAVVAWIIALLLGSVLGVM-----RTVPNRLVSGIATCYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPV--LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     + ++     +  +  ++S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPADMQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAV 239



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A ++G+++G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWYVTGLGWTIAIAVVAWIIALLLGSVLGVMRTVPNRLVSGIATCYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPADMQEWYKQD 103


>gi|298294199|ref|YP_003696138.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930710|gb|ADH91519.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 214

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 14/228 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              F            +     + + +F  G V+SL    L   F    G+ + L     
Sbjct: 1   MSEFSTWDVFRNLLAAVPWTIYLSLIAFAGGAVVSLILLSLRLAFPRVAGRPVHLYVQ-- 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +  G P L+ + L Y           F        +   ++  + LS Y++A++ E   
Sbjct: 59  -VFQGTPLLMQLFLVY-----------FGLALMGIQTTPLLAASLCLSVYSSAYLTETWY 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             ++AVP+GQ EA+ +LGL H +   L++LPQA+R  +PP     + ++KN+SLA  VGF
Sbjct: 107 GCVLAVPKGQWEASSSLGLPHWQQMLLIILPQALRLSVPPTVGLMVQIVKNTSLASIVGF 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +L      I N T +         FIY  +   I+L    L  +I +
Sbjct: 167 VELTRASQIIANATFEPFLAYGAVAFIYFVICFSISLCGRHLEKRIRI 214


>gi|295103462|emb|CBL01006.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Faecalibacterium prausnitzii SL3/3]
          Length = 227

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 18/215 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+      F F+ ++ + ++L         +    + +   YI  ++I G P LV + +
Sbjct: 28  MTIPLTLLSFFFAMIIAVAVALVQYA-----NVPVLRQIARFYI--WVIRGTPLLVQLFI 80

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +                   +   F +  IA +    A+ AE +R  L +VP+GQ+EA 
Sbjct: 81  IFY-----------GLPSVGIMLNAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAG 129

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             +G++  +  R ++LPQA+R+ +P L++  + ++K++SLA  +  A+L   G  +  +T
Sbjct: 130 YCVGMSWWQIMRRIVLPQALRTAVPALSNSLIGMIKDTSLASNITVAELFMAGQRVAART 189

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              + I      +YL    +I      L  ++  +
Sbjct: 190 YIFLPIYCEVAVVYLLFCTVITKLQALLERQLNAR 224



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 34/101 (33%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  G   T  L       A II   V   + +   ++  I R Y+ V R  P LV +F
Sbjct: 20  RILTAGLTMTIPLTLLSFFFAMIIAVAVALVQYANVPVLRQIARFYIWVIRGTPLLVQLF 79

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            ++  + SV  + +           N       T+     +
Sbjct: 80  IIFYGLPSVGIMLNAFPAAVIAFAFNEGAYCAETMRGALES 120


>gi|269966666|ref|ZP_06180745.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269828733|gb|EEZ82988.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 306

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYIS 225
                    T+  +     F+   G +L L     S          +       PL+++ 
Sbjct: 72  PYFFQGLISTLRLSIWGISFALAFGTLLGLARFSRSVWLRTPANAFIQLVRNIPPLVFVF 131

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +     L   +  +P   Q    G S +     S  + +   ++A+IA
Sbjct: 132 IFYFFISNQLIPLLGLEDLLRNYNGEPNTLQHFLFGPSNLWENLASGVLCVGLLSSAYIA 191

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VR GL ++ +GQ EA+ +LGL+     R V+ PQ ++SI P L  Q ++L+K++S+  
Sbjct: 192 EVVRGGLQSIDQGQWEASDSLGLSRWVKYRFVIAPQVLKSITPALAGQTISLVKDTSIVS 251

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   ++  VG  + N +G   EI LI    Y  +   ++L    + AK
Sbjct: 252 LISIQEMTFVGTEMANSSGYIFEIWLIVGLAYFLICFGLSLIFRHIEAK 300



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  L+  G+  A   GTL+G  R S +  +      ++++ RNIPPL
Sbjct: 73  YFFQGLISTLRLSIWGISFALAFGTLLGLARFSRSVWLRTPANAFIQLVRNIPPL 127


>gi|330877312|gb|EGH11461.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 242

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S  L I+L L     ++       +    +Y  T LI G+P LVL+ L + 
Sbjct: 28  WMTIKLAVLSLALSILLGLVGAS-AKLSSSALLRVPAQIY--TTLIRGIPDLVLMLLIFY 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +              F +  I L     A+  E  R  +++VPRGQ+EAA A 
Sbjct: 85  SLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVPRGQVEAATAY 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V+ PQ MR  +P + + +  +LK ++L   +G ADLV         T Q 
Sbjct: 145 GLKRGQRFRYVVFPQMMRYALPGIGNNWQVMLKATALVSIIGLADLVKASQDAGKSTYQL 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++   IYL ++      +       A   ++
Sbjct: 205 FYFLVLAALIYLMITSASNFALRWAERHYAAGSRE 239



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +  + +LS++ L+    ++Y  + R IP LV+
Sbjct: 19  FGPLLLEGTWMTIKLAVLSLALSILLGLVGASAKLSSSALLRVPAQIYTTLIRGIPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 79  MLLIFYSLQTWLTMLTDAMEWEY 101


>gi|229131355|ref|ZP_04260255.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST196]
 gi|228652099|gb|EEL08036.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST196]
          Length = 230

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKILNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSIIVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIILPQAFRLSLPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F+N L
Sbjct: 147 NQFIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLDTYIIVGLYYLVLVLLFTYFVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|37680520|ref|NP_935129.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           YJ016]
 gi|37199268|dbj|BAC95100.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           YJ016]
          Length = 227

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T A +   S V+G+ +++    ++R+            YI  F   G P L
Sbjct: 12  FPIYLDGLWTTAWLVAVSLVIGLGIAIPL-AVARNSRNYVVSLPAWGYIYFF--RGTPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 69  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++H    R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 123 EVEAAKAYGMSHWMTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGAARL 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+SL+ +I         + 
Sbjct: 183 VNSRYYAPFESFLTAGLFYMSLTFLILWVFKNAEKRF 219



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++    I   +   R S N +V+     Y+  FR  P LV ++ +
Sbjct: 15  YLDGLWTTAWLVAVSLVIGLGIAIPLAVARNSRNYVVSLPAWGYIYFFRGTPLLVQLYLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y  +    P+ D      + 
Sbjct: 75  YYGMDQFFPVKDTLWENAWF 94


>gi|330937577|gb|EGH41516.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 248

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +      R    +    +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVIAWIIALILGSVLGVM-----RTVPNRLVSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     + ++  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPITSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRAIEKKVAV 239



 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   N+LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVIAWIIALILGSVLGVMRTVPNRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|301383764|ref|ZP_07232182.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato Max13]
 gi|302059460|ref|ZP_07251001.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato K40]
 gi|302133660|ref|ZP_07259650.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|330966543|gb|EGH66803.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331015689|gb|EGH95745.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 242

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S  L I+L L     ++       +    +Y  T LI G+P LVL+ L + 
Sbjct: 28  WMTIKLAVLSLALSILLGLVGAS-AKLSSSALLRVPAQIY--TTLIRGIPDLVLMLLIFY 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +              F +  I L     A+  E  R  +++VPRGQ+EAA A 
Sbjct: 85  SLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTETFRGAILSVPRGQVEAATAY 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V+ PQ MR  +P + + +  LLK ++L   +G ADLV         T Q 
Sbjct: 145 GLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKASQDAGKSTYQL 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++   IYL ++      +       A   ++
Sbjct: 205 FYFLVLAALIYLMITSASNFALRWAERHYAAGSRE 239



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +  + +LS++ L+    ++Y  + R IP LV+
Sbjct: 19  FGPLLLEGTWMTIKLAVLSLALSILLGLVGASAKLSSSALLRVPAQIYTTLIRGIPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 79  MLLIFYSLQTWLTMLTDAMEWEY 101


>gi|254251721|ref|ZP_04945039.1| Amino acid ABC transporter [Burkholderia dolosa AUO158]
 gi|124894330|gb|EAY68210.1| Amino acid ABC transporter [Burkholderia dolosa AUO158]
          Length = 229

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L+    T+         SF+LG+V +      ++    +    +  +Y  
Sbjct: 1   MFLQGYGPLILAGTWQTVKLAVLSLALSFLLGLVGA-----AAKLSRNRVTNGIGTVY-- 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T LI G+P LVL+ L +        +              F++  + L     A+  E  
Sbjct: 54  TTLIRGVPDLVLMLLLFYSIQIWLNVATDALGWDQIDIDPFLAGVLVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   +G
Sbjct: 114 RGAFLSVPRGQLEAGSAYGMTNWQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            AD+V         T +     LI   IYL+++ +    +  L  + +   +K
Sbjct: 174 LADVVKASQDAGKGTLRFFFFTLIAGAIYLAITTVSNFVLMWLEKRYSTGVRK 226



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +  + ++G +  A +LS N++   I  VY  + R +P LV+
Sbjct: 6   YGPLILAGTWQTVKLAVLSLALSFLLGLVGAAAKLSRNRVTNGIGTVYTTLIRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|322372532|ref|ZP_08047068.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321277574|gb|EFX54643.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 226

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 113/235 (48%), Gaps = 9/235 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F     +       +T+  +  +  F  +LG+++SL      +    K  + L  L
Sbjct: 1   MNFSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSLI-----KRSGIKPLEWLVSL 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F   G P +V I + + L        QF  +         +   I LS  + A+I+
Sbjct: 56  YVWVF--RGTPMVVQIMIAFNLIHMNLPTVQFGILNLDL--SRIVPGIIVLSLNSGAYIS 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G+ ++P+GQ+EAA +LG+      R V+LPQA+++I+P L ++++ ++K+SSL  
Sbjct: 112 ESVRAGIESIPKGQVEAAYSLGIRPWNTMRYVVLPQAIKNILPALGNEFVTIIKDSSLLQ 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  +L +   T+   T   +  +L   F YL ++  +   + ++  ++    K
Sbjct: 172 TIGVMELWNGAQTVATTTYLTLTPLLFAAFYYLIVTTAMTALLKQMEKRLGEGRK 226



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    + +    G + T  ++   +   TI+G LV   + S  K + W+  +YV VFR 
Sbjct: 3   FSFLPQFWSYFNYGVLVTIMISVCVVFFGTILGVLVSLIKRSGIKPLEWLVSLYVWVFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDH 161
            P +V I   +  +   LP    
Sbjct: 63  TPMVVQIMIAFNLIHMNLPTVQF 85


>gi|256848427|ref|ZP_05553869.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256714694|gb|EEU29673.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 231

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 97/223 (43%), Gaps = 18/223 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRL--SRHFHEKTGKAL-----PLLYISTFLIFGL 232
              +     I V SF++G+V+++    +  S+       K L      +     +L    
Sbjct: 14  WAGIKYTIPIAVISFIIGLVIAVITALIKTSKPRGNAVVKGLWQLLKAIFSFYVWLFRST 73

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V + + +                       + +     S  T A+ +E +R+ + ++
Sbjct: 74  PLIVQLFIVFY-----------GLPNVGLQLNAWTAGICTFSLNTGAYASETIRAAISSI 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PR Q EAA ++G+T+++    ++ PQA R  IPPL++ ++ L+K++SLA  +  AD+  V
Sbjct: 123 PRSQWEAAYSIGMTYQQVLFKIIFPQAFRIAIPPLSNSFIGLVKDTSLASTITIADMFLV 182

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              I +   Q + +  I   +Y     ++ +    +  +++  
Sbjct: 183 SQQIASHNYQPLLMYSIVAAVYAIFCSLLTILQYYMEKRLSRY 225


>gi|229154119|ref|ZP_04282244.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 4342]
 gi|228629399|gb|EEK86101.1| Amino acid ABC transproter, permease [Bacillus cereus ATCC 4342]
          Length = 230

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + ++ RGQ+EAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q +E  +I    YL L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGMSELWGSGLSIAAGNFQQLETYMIVGLYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|37525533|ref|NP_928877.1| arginine transporter permease subunit ArtQ [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784961|emb|CAE13879.1| Arginine transport system permease protein artQ [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 238

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 103/222 (46%), Gaps = 12/222 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPTLV 236
             + V + VLG++L++          +             + LP + +  F+ FG   L+
Sbjct: 15  VGLAVSALVLGLILAMLFAAWESARWKPFAILGTCWVTLFRGLPEILVVLFVYFGASQLL 74

Query: 237 L-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A  + ++           I    VSP F+   IALS   +A+ ++ +R  + A+P G
Sbjct: 75  MTLADGFDINLIFWHSRIQIDIQDFYVSP-FLCGVIALSLLYSAYASQTLRGAIKAIPIG 133

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  ALGL   +    +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +
Sbjct: 134 QWEAGQALGLGRAEIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMQQTKS 193

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I  +T +     +I   IYL+++++    + ++       ++
Sbjct: 194 IATRTQEPFTWYMIVALIYLAITLISQFILKKIEMHTTRFDR 235


>gi|262274331|ref|ZP_06052142.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP
           101886]
 gi|262220894|gb|EEY72208.1| amino acid ABC transporter permease protein [Grimontia hollisae CIP
           101886]
          Length = 366

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            LV      +  + +L +    ++  F +F    GL      +     I +   ++GIV+
Sbjct: 113 LLVYEKTPKRGWILLLFLVAFPLLAVFLLFGGVAGLPNVETHLWGGLLITMIIAIVGIVV 172

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           SL       L R       ++L  +YI  +    L T++ +A           +    F+
Sbjct: 173 SLPIGIVLALGRRSDMPIIRSLSTVYIEVWRGVPLITVLFMA----------SVMLPLFM 222

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G + S + +   I +  + +A++AE+VR GL A+P+GQ EAA ALGLT+ K   L++LP
Sbjct: 223 SGESESNKLVRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMNLIILP 282

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIY 374
           QA++  IP + + ++ L K++SL + +G  D++ +G       N  G A E  +    ++
Sbjct: 283 QALKISIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPNWLGFATESYVFVALVF 342

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    ++
Sbjct: 343 WIFCFGMSRYSIYLENKLHTGHRR 366



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 78/200 (39%), Gaps = 7/200 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +A  G++ +  IG ++  GR S   ++  +  VY+EV+R +P L+ + F+
Sbjct: 155 LWGGLLITMIIAIVGIVVSLPIGIVLALGRRSDMPIIRSLSTVYIEVWRGVP-LITVLFM 213

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLF 203
              +L +    +          +     +   +       +             + L+ +
Sbjct: 214 ASVMLPLFMSGESESNKLVRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLTYW 273

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
                    +    ++P +  +   +F   +LVLI   +  L   +      N++G +T 
Sbjct: 274 KKMNLIILPQALKISIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPNWLGFATE 333

Query: 263 SPEFMSLYIALSCYTAAFIA 282
           S  F++L   + C+  +  +
Sbjct: 334 SYVFVALVFWIFCFGMSRYS 353


>gi|229814979|ref|ZP_04445317.1| hypothetical protein COLINT_02022 [Collinsella intestinalis DSM
           13280]
 gi|229809466|gb|EEP45230.1| hypothetical protein COLINT_02022 [Collinsella intestinalis DSM
           13280]
          Length = 397

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 67/351 (19%), Positives = 129/351 (36%), Gaps = 22/351 (6%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVG----FVNTFWLAFSGMIPA-TIIGTLVGAGRLSAN 122
           AG  +     P  S  ++A A+ V           +A   ++   T       A   +  
Sbjct: 35  AGMALSASPRPSLSFMTHAYALEVAVYYLLAAWLVIAAIALVFKLTRWKAYANASPFTRP 94

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            +V  +      V      L +         +       +      +      L      
Sbjct: 95  GVVRALRYGSYAVTAMTAVLAIDRVGCGLASAWAVATTATTRPSATLESMLYMLYNGRDI 154

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSR---------------HFHEKTGKALPLLYISTF 227
                K  V   V G V++ F   L                  F +  G      Y  + 
Sbjct: 155 FVAGLKTTVALAVFGTVIAFFLALLLVFLRIQVIDRSDNDFVRFWKVVGSGFARTY--ST 212

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P +V   + +   F    +        + +   F +  + +   + A++ E++R 
Sbjct: 213 VVRGTPMMVQAMIIFFGVFSLFKMTDLTTTQINAIWSTFTAGLVTIVLNSTAYMMEVLRG 272

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +V  GQMEAA +LGL+  +A R V+ PQ ++  IP L+++ +  +K+SS+   +G  
Sbjct: 273 GIESVDAGQMEAARSLGLSQWEAMRKVVFPQGVKFAIPGLSNELVINIKDSSVLSVIGTF 332

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           DL+    T+        E  L+   +YL L++  +  + RL +++ +K  K
Sbjct: 333 DLMFATTTVGGIYYAKFEAALVTSVMYLCLTMFASWLLGRLASRLDVKSVK 383


>gi|330970980|gb|EGH71046.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 242

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 3/237 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L    F                 K+ V S  L I+L L     ++       +    
Sbjct: 6   MQNLGLSAFSLKGFGPLLLEGTWMTVKLTVLSLALSILLGLIGAS-AKLSSSALLRVPAQ 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y  T LI G+P LVL+ L +        +              F +  I L     A+ 
Sbjct: 65  IY--TTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYF 122

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++L 
Sbjct: 123 TETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALV 182

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G ADLV         T Q    +++   IYL ++      +       A   ++
Sbjct: 183 SIIGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITSASNFALRWAERYYAAGSRE 239



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 41/83 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L    +  + ++G +  + +LS++ L+    ++Y  + R +P LV+
Sbjct: 19  FGPLLLEGTWMTVKLTVLSLALSILLGLIGASAKLSSSALLRVPAQIYTTLIRGVPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 79  MLLIFYSLQTWLTMLTDAMEWEY 101


>gi|323698838|ref|ZP_08110750.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458770|gb|EGB14635.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 216

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 14/229 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +    +    +       I   S ++G V+        R    +  K     Y+S
Sbjct: 1   MFDFTIIWGHIPELMVGAWRTLWISFVSIIIGFVIGHLLC-FGRFSEHRLLKRSITAYVS 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P LV +A+ +      P+ G F         P   +  IALS  TAAF +EI+
Sbjct: 60  FF--RGTPLLVQLAIIFYF---LPLFGIF--------IPSVAAAIIALSMNTAAFQSEIL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G  ++P GQ+EAA  LGLT  +    + +PQ  R+ +P L ++ +++LKNS+L   + 
Sbjct: 107 RGGFQSMPHGQIEAARDLGLTTWQIRLHIQIPQVFRATLPALVNESIDILKNSALISTIA 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             DL+ +  T+ + T + IE  L    +Y  ++  I+     L  ++  
Sbjct: 167 VTDLMRISQTLASTTFRPIEFFLAAGAMYFVMTYSISHLGVVLERRLKR 215



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 40/100 (40%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T    +   ++VG   T W++F  +I   +IG L+  GR S ++L+      YV  FR
Sbjct: 3   DFTIIWGHIPELMVGAWRTLWISFVSIIIGFVIGHLLCFGRFSEHRLLKRSITAYVSFFR 62

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
             P LV +  ++  +                + +N     
Sbjct: 63  GTPLLVQLAIIFYFLPLFGIFIPSVAAAIIALSMNTAAFQ 102


>gi|229524911|ref|ZP_04414316.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229338492|gb|EEO03509.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
          Length = 223

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+LF   + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 169 LGVAEIMAKAQIEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+   +   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  V P
Sbjct: 75  YYGLPQVFP 83


>gi|15640041|ref|NP_062593.1| amino acid ABC transproter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121591472|ref|ZP_01678745.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121730358|ref|ZP_01682715.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147675477|ref|YP_001218403.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153212968|ref|ZP_01948562.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|153819843|ref|ZP_01972510.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|227080246|ref|YP_002808797.1| amino acid ABC transproter, permease protein [Vibrio cholerae
           M66-2]
 gi|229508295|ref|ZP_04397799.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229508866|ref|ZP_04398357.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229515951|ref|ZP_04405408.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229517137|ref|ZP_04406583.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229520182|ref|ZP_04409609.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229530204|ref|ZP_04419593.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229606569|ref|YP_002877217.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254291130|ref|ZP_04961927.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|254851574|ref|ZP_05240924.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255746808|ref|ZP_05420754.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262167098|ref|ZP_06034813.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|297581956|ref|ZP_06943876.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|298501195|ref|ZP_07010994.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9654400|gb|AAF93187.1| amino acid ABC transproter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121546674|gb|EAX56856.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121627889|gb|EAX60471.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|124116194|gb|EAY35014.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|126509604|gb|EAZ72198.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|146317360|gb|ABQ21899.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|150422975|gb|EDN14925.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|227008134|gb|ACP04346.1| amino acid ABC transproter, permease protein [Vibrio cholerae
           M66-2]
 gi|227011988|gb|ACP08198.1| amino acid ABC transproter, permease protein [Vibrio cholerae O395]
 gi|229332337|gb|EEN97824.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229342776|gb|EEO07767.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229346200|gb|EEO11172.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229347051|gb|EEO12013.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229354141|gb|EEO19073.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229354568|gb|EEO19490.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229369224|gb|ACQ59647.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254847279|gb|EET25693.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255735565|gb|EET90964.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262024484|gb|EEY43170.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|297533823|gb|EFH72664.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297540067|gb|EFH76129.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|327482922|gb|AEA77329.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 223

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+LF   + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+   +   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  V P
Sbjct: 75  YYGLPQVFP 83


>gi|328471192|gb|EGF42094.1| putative amino acid ABC transporter permease [Vibrio
           parahaemolyticus 10329]
          Length = 246

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 115/239 (48%), Gaps = 17/239 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
                       G+      ++    T+  +     F+  LG++++L A   S      T
Sbjct: 22  WGWYVLDPSTEQGIANLKFLVAGFNDTIQVSFLSMCFAMTLGLLIALPALSRS-----PT 76

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            K +  +Y+   +I  +P LVL+     +++  P L   +          F +  IAL+ 
Sbjct: 77  LKWMNRIYVE--VIRSIPVLVLLL---WVYYGMPALLDVSL-------NHFWAGVIALTI 124

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA R I+PPL +Q++ +L
Sbjct: 125 AESAFMAEVFRGGIQAINRGQHEAAESLGLNYWQKMRLVILPQAFRQILPPLGNQFVYIL 184

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           K SSL   +G +DL      ++      +EI    +  YL L + ++  +  L  +IA+
Sbjct: 185 KMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILFVSQAVRWLEKRIAI 243



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 39/68 (57%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ GF +T  ++F  M  A  +G L+    LS +  + W+ R+YVEV R+IP LV++
Sbjct: 38  LKFLVAGFNDTIQVSFLSMCFAMTLGLLIALPALSRSPTLKWMNRIYVEVIRSIPVLVLL 97

Query: 146 FFLYKSVL 153
            ++Y  + 
Sbjct: 98  LWVYYGMP 105


>gi|227327917|ref|ZP_03831941.1| putative amino-acid transport system permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 221

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           + P+   + +   S  +  +     + + SF+ G+ L +    L R +  K  K +   Y
Sbjct: 1   MPPWLQLMADSFWSLLSAGLKFTVPLAILSFIFGLALGIII-ALVRLYGPKPLKWVGDFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  +    A+ +E
Sbjct: 60  V--WVIRGTPLLVQLFLIFY-----------GLPSAGITLDAFPAALIGFTISVGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR  +++VP+GQ  AA +LG+  R+A R V+ PQ++   +PPL++ +++L+K++SLA  
Sbjct: 107 IVRGAILSVPKGQWNAAYSLGMNGRQAIRWVIFPQSVFVSLPPLSNTFISLIKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   ++      I++ T + + + +    IYL  S +++    +L      
Sbjct: 167 ITVPEMFLSAQRIVSVTYEPLILYVEAALIYLMFSTVLSQLQVKLEKYYQR 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S+ + +  G   T  LA    I    +G ++   RL   K + W+   YV V R  P 
Sbjct: 9   ADSFWSLLSAGLKFTVPLAILSFIFGLALGIIIALVRLYGPKPLKWVGDFYVWVIRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S     D       G  ++
Sbjct: 69  LVQLFLIFYGLPSAGITLDAFPAALIGFTIS 99


>gi|28871279|ref|NP_793898.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28854529|gb|AAO57593.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 237

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S  L I+L L     ++       +    +Y  T LI G+P LVL+ L + 
Sbjct: 23  WMTIKLAVLSLALSILLGLVGAS-AKLSSSALLRVPAQIY--TTLIRGIPDLVLMLLIFY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +              F +  I+L     A+  E  R  +++VPRGQ+EAA A 
Sbjct: 80  SLQTWLTMLTDAMEWEYIEINPFGAGVISLGFIYGAYFTETFRGAILSVPRGQVEAATAY 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V+ PQ MR  +P + + +  LLK ++L   +G ADLV         T Q 
Sbjct: 140 GLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSIIGLADLVKASQDAGKSTYQL 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++   IYL ++      +       A   ++
Sbjct: 200 FYFLVLAALIYLMITSASNFALRWAERHYAAGSRE 234



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +  + +LS++ L+    ++Y  + R IP LV+
Sbjct: 14  FGPLLLEGTWMTIKLAVLSLALSILLGLVGASAKLSSSALLRVPAQIYTTLIRGIPDLVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 74  MLLIFYSLQTWLTMLTDAMEWEY 96


>gi|55823261|ref|YP_141702.1| ABC transporter amino acid permease [Streptococcus thermophilus
           CNRZ1066]
 gi|55739246|gb|AAV62887.1| ABC transporter amino acid permease protein [Streptococcus
           thermophilus CNRZ1066]
          Length = 231

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 11/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +++ F               +     I + S +L I++ LF T L +    K    +  +
Sbjct: 1   MLMNFSWEYFFELFVKLPAYIPVTIFIALISMILAILIGLFITWL-QLSKNKVLIFISQV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS F   G+PTLV + L +   +  P L                +  I L    AA+++
Sbjct: 60  YISLF--RGMPTLVQLFLIF---YGLPQL-----FPAFKGMSALTAALIGLGLKEAAYLS 109

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+ + ++ +GQ+EA  AL +   K    V+LPQA  + +P   + +++LLK +SLA 
Sbjct: 110 EIFRAAINSIDKGQIEAGEALNIPAWKVFLHVILPQATLNALPATGNTFISLLKETSLAF 169

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  +L      I  ++ +  E  L    +Y  + ++      +   ++ +  ++
Sbjct: 170 TLGITELFGNAKMIAGESFRYFETYLAVGLLYWIMIVVYTWVQKQFEKELEIPYRR 225



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 39/70 (55%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++A   MI A +IG  +   +LS NK++ +I +VY+ +FR +P LV +F ++  +  +
Sbjct: 24  TIFIALISMILAILIGLFITWLQLSKNKVLIFISQVYISLFRGMPTLVQLFLIFYGLPQL 83

Query: 156 LPIPDHSIVL 165
            P       L
Sbjct: 84  FPAFKGMSAL 93


>gi|295426473|ref|ZP_06819123.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
 gi|295063841|gb|EFG54799.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
          Length = 213

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  L+    T+  +    +FS +LGI  ++           K  + +  +YI  F    
Sbjct: 9   WSSFLTGFWNTILCSVIALIFSLILGIFFAMLEVA-----PPKFVRIIAHIYIEVFRNIP 63

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L  +V+I           ++ +F F         F S  I L+ YT+AFIAE VRSG+ +
Sbjct: 64  LLVIVMIF--------YLIVPRFFF-----KLSGFQSGTIGLTLYTSAFIAETVRSGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQME A + G+T+ +A R V+LPQAM+ +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 IGEGQMEGARSNGMTYIQAMRYVILPQAMKIVIPPLGNQFVNLIKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I   + Q I+  ++    YL L++ ++ ++  L  K+A
Sbjct: 171 QAQLIAFASFQTIDTYIVVGLFYLVLTLPLSYYLRHLEKKLA 212



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            ++ L GF NT   +   +I + I+G       ++  K V  I  +Y+EVFRNIP LV++
Sbjct: 9   WSSFLTGFWNTILCSVIALIFSLILGIFFAMLEVAPPKFVRIIAHIYIEVFRNIPLLVIV 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
              Y  V               G+ L     
Sbjct: 69  MIFYLIVPRFFFKLSGFQSGTIGLTLYTSAF 99


>gi|303247500|ref|ZP_07333772.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491196|gb|EFL51088.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 230

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 106/228 (46%), Gaps = 9/228 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F  F  +R +      + T+  + + S +LG+ + +     +R +  +    +   Y+S 
Sbjct: 4   FYHFAVSRIIPALNAGLWTSILLIIPSSLLGVAIGVSVGT-ARVYGPRPLVRVLEWYVSL 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V +   Y        L   +  G   +     +  I  +  + A+ +E +R
Sbjct: 63  F--RGTPLVVQLYFWYF------ALPYVSIGGWRCILSPMWASIIGFALCSGAYQSEYIR 114

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL+++ RGQ+ AA ALG+T       V+LPQA R  +P   ++ + L+K SSLA  +  
Sbjct: 115 GGLLSIKRGQLRAAQALGMTPFTTITSVVLPQAFRRALPGCGNEIIYLIKYSSLASIITV 174

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +DL  +G ++   T +  E+ ++    YL+L  +  L +  +  ++ L
Sbjct: 175 SDLTGMGRSLAKATFRNTEVFVVVGVYYLALVTVATLVLRSVEKRLEL 222



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S    A+  G   +  L     +    IG  VG  R+   + +  +   YV +FR  P +
Sbjct: 10  SRIIPALNAGLWTSILLIIPSSLLGVAIGVSVGTARVYGPRPLVRVLEWYVSLFRGTPLV 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           V ++F Y ++  V       I+ P    +    L       +      +
Sbjct: 70  VQLYFWYFALPYVSIGGWRCILSPMWASIIGFALCSGAYQSEYIRGGLL 118


>gi|209546985|ref|YP_002278903.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538229|gb|ACI58163.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 248

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 5/222 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     +   S   G V+S+    L R        A  L Y   F   G P L
Sbjct: 10  LLTLPRGLALTLALTFASLAAGFVISVPLAFL-RASPNPWAFAPVLAYTYAF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y      P + Q      + +   F   +IA +  +AA   E++R G+  VP G
Sbjct: 67  VQLFLIYYGIGQLPFVRQSFL--WAVMREPFWCAFIAFTLNSAAHTTEVLRGGIQTVPLG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA ALGL+     RL++ P A+R  +P   ++ + +LK SSLA  +   ++  +   
Sbjct: 125 QIEAAKALGLSRLHVMRLIVFPLAIRIALPAYVNEVIGMLKASSLASTITLLEITGIARQ 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++++T    E+ ++   +YL L+++I      L A      K
Sbjct: 185 LVSETFAPYEVFIVAGSLYLLLTLIINRIFLILEAHWERSSK 226


>gi|90419716|ref|ZP_01227625.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335757|gb|EAS49505.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 226

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 105/220 (47%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     + + SF  G+ L  F T + R F  K   A+   Y+    I G P L
Sbjct: 13  WPLVRAGLVFTVPLAILSFAFGLSLG-FMTAVVRLFGPKPLAAIARFYVWF--IRGTPLL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + +                   +   F +  I  +    A+ +EI+R+ L ++ +G
Sbjct: 70  VQLFVIFY-----------GLPSVGILIDAFPAALIGFTLSVGAYTSEIIRAALSSINKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA A+G+T  +A +  ++PQA+R  +PPL++ +++L+K++SLA A+   +L      
Sbjct: 119 QWEAAYAIGMTRNQAMKRTIVPQAVRVAVPPLSNSFISLVKDTSLAAAITVPELFQQAQR 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I+  T + + + +    +YL LS +++   +RL A+   +
Sbjct: 179 IVATTYEPLILYVEAALLYLVLSSVLSALQSRLEARFGRQ 218



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +  G V T  LA         +G +    RL   K +A I R YV   R  P L
Sbjct: 10  DSLWPLVRAGLVFTVPLAILSFAFGLSLGFMTAVVRLFGPKPLAAIARFYVWFIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV  + D       G  L+
Sbjct: 70  VQLFVIFYGLPSVGILIDAFPAALIGFTLS 99


>gi|166031609|ref|ZP_02234438.1| hypothetical protein DORFOR_01309 [Dorea formicigenerans ATCC
           27755]
 gi|166028586|gb|EDR47343.1| hypothetical protein DORFOR_01309 [Dorea formicigenerans ATCC
           27755]
          Length = 236

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 104/227 (45%), Gaps = 12/227 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + +     T+       +   ++G +++            K    +   Y++ F   G
Sbjct: 21  YAKVIQGLQNTLLIAVTGLIIGIIVGTLIATVRVLPKYKTLPKVLNGICSFYVALF--RG 78

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V + + Y +      L                   +     + A+I+EI+RSG+ +
Sbjct: 79  TPMVVQLLVFYYVLLPIIGLK----------ITGVQVAMLVFGLNSGAYISEIMRSGIQS 128

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEA  A+GL+   +   +++PQA+++I+P L +++++L+K +S+   VG ADL  
Sbjct: 129 VDSGQMEAGRAVGLSFGTSMMKIVIPQAVKNILPTLGNEFISLIKETSVVSFVGAADLYV 188

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I + + + +   L+   IY++L ++I+L +  +   +   +++
Sbjct: 189 AFNYIGSNSYEFMVPYLVMALIYIALVLIISLLIKLMERSLKKSDRR 235



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYV 133
           +   + YA  I  G  NT  +A +G+I   I+GTL+   R+        K++  IC  YV
Sbjct: 15  FVEQNGYAKVI-QGLQNTLLIAVTGLIIGIIVGTLIATVRVLPKYKTLPKVLNGICSFYV 73

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            +FR  P +V +   Y  +L ++ +    + +   +F
Sbjct: 74  ALFRGTPMVVQLLVFYYVLLPIIGLKITGVQVAMLVF 110


>gi|328479075|gb|EGF48533.1| amino acid ABC transporter permease [Lactobacillus rhamnosus MTCC
           5462]
          Length = 224

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 10/226 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T  +     + + +L ++ SL    L         K L ++      +  
Sbjct: 1   MWSILTNNWNTFLSGLGFTLAASILALIGSLIVGTLFALMEISPFKPLRVIGRIYVEVVR 60

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              L++I L + +     ++ QF           F +  I L  YT+AFIAE VR+G+ A
Sbjct: 61  NIPLLVITLAFYV-----IVPQF-----IVKIDGFTAGTIGLLIYTSAFIAETVRAGIEA 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQME A ++G+T+ +A   ++ PQA + +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 VPSGQMEGARSIGMTYTQAMTQIIFPQAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            G  I   T    +  LI    YL L++ ++  M  L       E+
Sbjct: 171 QGKLIAATTFSTFDTYLIVGIFYLILTMPLSYLMRYLEKMGDRLER 216



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 40/102 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L G   T   +   +I + I+GTL     +S  K +  I R+YVEV RNIP LV+ 
Sbjct: 9   WNTFLSGLGFTLAASILALIGSLIVGTLFALMEISPFKPLRVIGRIYVEVVRNIPLLVIT 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              Y  V   +   D       G+ +        T+     A
Sbjct: 69  LAFYVIVPQFIVKIDGFTAGTIGLLIYTSAFIAETVRAGIEA 110


>gi|303250562|ref|ZP_07336759.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307252993|ref|ZP_07534880.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650550|gb|EFL80709.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859522|gb|EFM91548.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 223

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L  +      K      +   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETNKQPCISKPTS---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEK----LTGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       ++LPQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLRIILPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEKRFTRFER 220


>gi|310643432|ref|YP_003948190.1| amino acid abc-type transporter, permease component [Paenibacillus
           polymyxa SC2]
 gi|309248382|gb|ADO57949.1| Amino acid ABC-type transporter, permease component [Paenibacillus
           polymyxa SC2]
          Length = 222

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 46/174 (26%), Positives = 91/174 (52%), Gaps = 11/174 (6%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             ++I G P LV +   Y + +  P +       G T+ P F++  I  +    A+ +EI
Sbjct: 60  YVWVIRGTPLLVQL---YIIFYGLPSV-------GITLDP-FIASVIGFTLSVGAYSSEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I++  GQ EA  +LG+T  +  R ++LPQA R  +PPL + +++L+K++SLA  +
Sbjct: 109 MRAAIISIQEGQWEAGYSLGMTRWQVLRRIVLPQASRVSVPPLANSFISLVKDTSLAATI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + ++      I+  T + + +      IYL  S ++ +  N L  +++    +
Sbjct: 169 TYVEMFRTANQIVATTYEPLLVYTEAGVIYLLFSTILTVLQNYLEKRLSRFSVR 222


>gi|53720000|ref|YP_108986.1| histidine transport system permease [Burkholderia pseudomallei
           K96243]
 gi|76809420|ref|YP_334237.1| histidine transport system permease [Burkholderia pseudomallei
           1710b]
 gi|126441376|ref|YP_001059756.1| amino acid ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126453531|ref|YP_001067042.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1106a]
 gi|167720505|ref|ZP_02403741.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei DM98]
 gi|167739496|ref|ZP_02412270.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 14]
 gi|167816702|ref|ZP_02448382.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 91]
 gi|167846610|ref|ZP_02472118.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei B7210]
 gi|237813150|ref|YP_002897601.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242315151|ref|ZP_04814167.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254195799|ref|ZP_04902225.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei S13]
 gi|254261920|ref|ZP_04952974.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1710a]
 gi|52210414|emb|CAH36396.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|76578873|gb|ABA48348.1| histidine transport system permease protein [Burkholderia
           pseudomallei 1710b]
 gi|126220869|gb|ABN84375.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 668]
 gi|126227173|gb|ABN90713.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|169652544|gb|EDS85237.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei S13]
 gi|237504845|gb|ACQ97163.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242138390|gb|EES24792.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254220609|gb|EET09993.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1710a]
          Length = 229

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    ++L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLAAAVLLGLVG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLMSWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GSAYGMNGMRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++    L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTASNLVLRQLEKRYSIGVRH 226



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G V T  L+   +  A ++G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPLIWAGTVQTIELSVLSLAAAVLLGLVGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +  L+ S+   L      +   
Sbjct: 66  MLLLFYSIQIWLNQFTDLMSWD 87


>gi|261318648|ref|ZP_05957845.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|265986447|ref|ZP_06099004.1| amino acid ABC transporter permease [Brucella pinnipedialis
           M292/94/1]
 gi|261297871|gb|EEY01368.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|264658644|gb|EEZ28905.1| amino acid ABC transporter permease [Brucella pinnipedialis
           M292/94/1]
          Length = 254

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 13/243 (5%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             +        ++P  + L    L                      +     T L R F 
Sbjct: 17  FIIPITAKEPKLVPDWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFA 76

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
                ++   Y+  F   G P LV + + +                       F +  I 
Sbjct: 77  PVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFPAALIG 123

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL++ ++
Sbjct: 124 FTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFI 183

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    RL  + 
Sbjct: 184 SLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERRF 243

Query: 393 ALK 395
              
Sbjct: 244 GRY 246



 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 37  ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 96

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 97  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 127


>gi|160943011|ref|ZP_02090249.1| hypothetical protein FAEPRAM212_00488 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445705|gb|EDP22708.1| hypothetical protein FAEPRAM212_00488 [Faecalibacterium prausnitzii
           M21/2]
          Length = 227

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 18/215 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+      F F+ ++ + ++L         +    + +   YI  ++I G P LV + +
Sbjct: 28  MTIPLTLLSFFFAMIIAVAVALVQYA-----NVPVLRQIARFYI--WVIRGTPLLVQLFI 80

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +                   +   F +  IA +    A+ AE +R  L +VP+GQ+EA 
Sbjct: 81  IFY-----------GLPSVGIMLNAFPAAVIAFAFNEGAYCAETMRGALESVPQGQLEAG 129

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             +G++  +  R ++LPQA+R+ +P L++  + ++K++SLA  +  A+L   G  +  +T
Sbjct: 130 YCVGMSWWQIMRRIVLPQALRTAVPALSNSLIGMIKDTSLASNITVAELFMAGQRVAART 189

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              + I      +YL    +I      L  ++  +
Sbjct: 190 YIFLPIYCEVAVVYLLFCTVITKLQALLERQLNAR 224



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 34/101 (33%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  G   T  L       A II   V   + +   ++  I R Y+ V R  P LV +F
Sbjct: 20  RILTAGLTMTIPLTLLSFFFAMIIAVAVALVQYANVPVLRQIARFYIWVIRGTPLLVQLF 79

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            ++  + SV  + +           N       T+     +
Sbjct: 80  IIFYGLPSVGIMLNAFPAAVIAFAFNEGAYCAETMRGALES 120


>gi|254248453|ref|ZP_04941773.1| hypothetical protein BCPG_03284 [Burkholderia cenocepacia PC184]
 gi|124874954|gb|EAY64944.1| hypothetical protein BCPG_03284 [Burkholderia cenocepacia PC184]
          Length = 235

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     +      L    +T++  A  FV S VLG++L+L           K  +   + 
Sbjct: 11  MFFQNAIDFLPILLKGAVVTIEITACAFVLSSVLGLILALM----------KVSRNRAVA 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              + ++  +  L +I   + ++F  P L              F +  + L    +A+ A
Sbjct: 61  TAGSTIVNVIRGLPIIVQLFYMYFVLPDL--------GVQLSAFQAGVLGLGIAYSAYQA 112

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ A+ RGQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A 
Sbjct: 113 ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVAS 172

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  A++   G  I + T Q + +  +   +YL+L + +   +NRL  ++AL+ 
Sbjct: 173 TITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFAVNRLGKRLALRR 226


>gi|77413498|ref|ZP_00789688.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77160442|gb|EAO71563.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
          Length = 207

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 10/179 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K GK +  +Y+  F     P LV +   Y         G      G  +   F +  
Sbjct: 31  SKSKVGKLISRIYVEVF--QNTPLLVQMVFVYY--------GLAIISNGHVMISAFFTAV 80

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+PP+T+Q
Sbjct: 81  LCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMTNQ 140

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +NL+KN+S    +  AD++ V       T   I         Y  +   +A +  +  
Sbjct: 141 VVNLIKNTSTVAIISGADIMFVAKAWAYDTTNYIPAFAGAAIFYFVICFPLASWARKQE 199



 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 37/61 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  ++F  ++ A I+G L G    S +K+   I R+YVEVF+N P LV + F+Y  
Sbjct: 3   GFLYTLGISFGALLLALILGILSGGLSTSKSKVGKLISRIYVEVFQNTPLLVQMVFVYYG 62

Query: 152 V 152
           +
Sbjct: 63  L 63


>gi|295702499|ref|YP_003595574.1| glutamine ABC transporter permease GlnM [Bacillus megaterium DSM
           319]
 gi|294800158|gb|ADF37224.1| glutamine ABC transporter, permease protein GlnM [Bacillus
           megaterium DSM 319]
          Length = 211

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 113/231 (48%), Gaps = 25/231 (10%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + F +  NN  L          A +   V SFVLG ++++      R    K    +   
Sbjct: 1   MDFSILTNNMDLYLEGFKYTIIASLIALVASFVLGTIIAVM-----RIAPLKIVNVIGTA 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                      + P++    FI          +  + L+ YTAAFIA
Sbjct: 56  YVEFIR------------------NIPLVVIVFFIFIVAGISGTAAGVLGLTIYTAAFIA 97

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+G++AVP+GQ+EAA + GLT+ +A R ++LPQA++ +IPPL +Q++NL+KNSS+  
Sbjct: 98  EAIRAGIMAVPKGQLEAARSSGLTYGQAMRFIILPQAIKIVIPPLGNQFINLVKNSSVLG 157

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            V   DL+     + ++T    ++ +     YL L+I ++L +  L  ++ 
Sbjct: 158 IVAGFDLMYQADLVSSRTYVVFDVYIFVALFYLVLTIPLSLGVGYLEKRLG 208



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 33/65 (50%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  ++     L GF  T   +   ++ + ++GT++   R++  K+V  I   YVE  
Sbjct: 1   MDFSILTNNMDLYLEGFKYTIIASLIALVASFVLGTIIAVMRIAPLKIVNVIGTAYVEFI 60

Query: 137 RNIPP 141
           RNIP 
Sbjct: 61  RNIPL 65


>gi|269797367|ref|YP_003311267.1| polar amino acid ABC transporter inner membrane subunit
           [Veillonella parvula DSM 2008]
 gi|269093996|gb|ACZ23987.1| polar amino acid ABC transporter, inner membrane subunit
           [Veillonella parvula DSM 2008]
          Length = 218

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 16/209 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            +++ S   GI++++   RLS+            +    +L+ G P ++ I   Y   + 
Sbjct: 25  IVWILSIPGGILMAML--RLSKLPLVDKF-----VDAFVYLMRGTPLMLQILFVY---YA 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P++       G+    +  +  +      AA++ EI R G+ ++ RGQ E A  LG T+
Sbjct: 75  LPIIT-----DGAIQMDDATAAVLTFVLNYAAYLCEIFRGGIQSISRGQYEGAKVLGFTY 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++LPQ  + ++PPL ++ +NLLK++SL   +   D++ +  +I+ +    I   
Sbjct: 130 AQTMRKIILPQMFKRVLPPLANETINLLKDTSLVYVLAMNDILRITKSIVQRDFD-ISAF 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+    YL  + ++    N L  + A+ E
Sbjct: 189 LVAALFYLIFTFILTNIFNYLERRFAVYE 217



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L     I +   G L+   RLS   LV      +V + R  P ++ I F+
Sbjct: 12  IADGLKVTVSLFCIVWILSIPGGILMAMLRLSKLPLVDKFVDAFVYLMRGTPLMLQILFV 71

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 72  YYALP 76


>gi|186477319|ref|YP_001858789.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193778|gb|ACC71743.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 225

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 6/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           KI + + V+GIV       L R    K  +    LY++ F       L
Sbjct: 13  LPTLWTGAIVTLKITILAIVIGIVWGTVL-ALLRLSGIKPLEWFAKLYVTLFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P + Q      + +     S  +A S + AA+ +EI+R+G+ AVPRG
Sbjct: 69  VMVLLWFFL--IVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ A+ ALG+++ +A RLV+LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNASYALGMSYPQAMRLVVLPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G  +E++L     Y  + ++ +  +  L  K+A 
Sbjct: 187 IGDRDGTNVEMVLFAGACYFVICVVASSLVKSLQKKVAR 225



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +    ++   + GT++   RLS  K + W  ++YV +FR+IP ++V+ + 
Sbjct: 16  LWTGAIVTLKITILAIVIGIVWGTVLALLRLSGIKPLEWFAKLYVTLFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|330898558|gb|EGH29977.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330981581|gb|EGH79684.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 248

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +      R    +    +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVIAWIIALILGSVLGVM-----RTVPNRLVSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRAIEKKVAV 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   N+LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVIAWIIALILGSVLGVMRTVPNRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|317486430|ref|ZP_07945257.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316922340|gb|EFV43599.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 255

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 20/258 (7%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           F L  + L    +     +     +                    +    + + ++LF  
Sbjct: 10  FLLIGAWLFRAVLAGADGISYDWQWYRVWRYLGRWTDGHFIPGPLLDGLGMTVRIALFGL 69

Query: 206 RLSRHFH--------EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            L+             +   A  + ++    +   P L+ +   Y L      +G F   
Sbjct: 70  ALAVAAGLGAALLRLSQWPVARGMAHVYVGCLRNTPLLLQLFFVYFLFAPAIGVGPFG-- 127

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                     +  +AL  +  A++AE+ R+GL +VPR Q EA I+LGL      RLV+LP
Sbjct: 128 ----------AAVLALGLFEGAYMAELFRAGLQSVPRAQWEAGISLGLGVWNTLRLVILP 177

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+R ++PPLTSQ ++L+K++SL  A+  ADL      +I  T  A EI LI   +YL+L
Sbjct: 178 QAVRRMLPPLTSQLVSLIKDTSLVSAIAVADLTMQAQVLIADTFLAFEIWLIVAALYLAL 237

Query: 378 SIMIALFMNRLNAKIALK 395
           ++ +AL    +  + A +
Sbjct: 238 TLCVALPARWMERRYAWR 255


>gi|298291727|ref|YP_003693666.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296928238|gb|ADH89047.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 220

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 14/224 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            G  LN   L F          + V + V G  L+ F   L R    +T + L   Y+  
Sbjct: 1   MGGALNVNHLLFLGHGALWTIGLSVIALVGG-GLAGFLVALGRVSPSRTVRLLAATYVQ- 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI G P LV++ L +           F             +   +++ + AA++ EI R
Sbjct: 59  -LIQGTPLLVIMFLSF-----------FGLAAIGFNISPLAAAGASMTIFVAAYLGEIWR 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + AVPR Q EAA  L L+  +    V+LPQA+R   PP     + ++KN+SLA  VGF
Sbjct: 107 GCIEAVPRPQWEAAEGLALSRSQRMVKVILPQAIRIATPPTVGFMVQIIKNTSLASVVGF 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +L   G  I N   +   I  I   +Y SL   ++    RL  
Sbjct: 167 VELTRSGQIINNSMFEPFLIYSIIAVVYFSLCYPLSRLSRRLER 210



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 40/104 (38%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   +  G + T  L+   ++   + G LV  GR+S ++ V  +   YV++ +  P LV
Sbjct: 8   NHLLFLGHGALWTIGLSVIALVGGGLAGFLVALGRVSPSRTVRLLAATYVQLIQGTPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           ++F  +  + ++             M +               A
Sbjct: 68  IMFLSFFGLAAIGFNISPLAAAGASMTIFVAAYLGEIWRGCIEA 111


>gi|229171200|ref|ZP_04298793.1| Amino acid ABC transproter, permease [Bacillus cereus MM3]
 gi|228612280|gb|EEK69509.1| Amino acid ABC transproter, permease [Bacillus cereus MM3]
          Length = 230

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKILNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSIIVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQ+EAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSLPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++   F+N L
Sbjct: 147 NQFIIGLKDSSLVAYVGLSELWGSGLSIAASNFQQLDTYIIVGLYYLVLVLLFTYFVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|152995145|ref|YP_001339980.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150836069|gb|ABR70045.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 229

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S  +G++L L     ++       + +   Y +T +      L ++ + +  
Sbjct: 17  VTLELALSSLFVGLILGLLGAS-AKLSSIAVIRWIANGY-TTIIRGIPELLTVLIIYFGA 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +              F +   AL     A+  E+ R  L ++P+GQ EAAIALG
Sbjct: 75  TSVLMAIAGLFGYDEYIEVGAFAAGVTALGLTFGAYATEVFRGALQSIPKGQHEAAIALG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +    ++LPQ  R  +P L + +L LLK+++L   VG  D++      ++ T QA 
Sbjct: 135 MGPIRKFYRIILPQVWRIALPGLGNLFLVLLKDTALVSVVGLDDIMRKANIAVSSTKQAF 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+  F+YL+L+I+  +F++ +  + +    +
Sbjct: 195 LFYLVAAFMYLALTIISMVFVSYMEKRASRGLNR 228



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 35/71 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G V T  LA S +    I+G L  + +LS+  ++ WI   Y  + R IP L+ 
Sbjct: 7   FGDQLLQGAVVTLELALSSLFVGLILGLLGASAKLSSIAVIRWIANGYTTIIRGIPELLT 66

Query: 145 IFFLYKSVLSV 155
           +  +Y    SV
Sbjct: 67  VLIIYFGATSV 77


>gi|77459026|ref|YP_348532.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77383029|gb|ABA74542.1| amino acid ABC transporter membrane protein, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 281

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 112/254 (44%), Gaps = 18/254 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           ++F  +  L    I +    L       N  L    LT+        FS +LG V     
Sbjct: 44  VWFFMRFDLKFSIILEKWPNLVGLHLGPNGFLQGAALTIFLCFCSIWFSLLLGFV----- 98

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           T L+R         +   Y S F    L          Q+      L Q   + G+    
Sbjct: 99  TALARLSSSAVAFGIASFYASFFRGTPLLI--------QILLIYLGLPQLGVVPGAI--- 147

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              +  IALS    A+++EI R+G++AV  GQ EAA ALGL        ++LPQAMR+II
Sbjct: 148 --SAGIIALSLNYGAYLSEIFRAGILAVAPGQREAAAALGLRPAATFIHIILPQAMRTII 205

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PP TSQ++++LK+SSL   +G  +++ +  +    + + IE++     IY  LSI + L 
Sbjct: 206 PPTTSQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAAIYWLLSIGLELI 265

Query: 385 MNRLNAKIALKEKK 398
            +RL        K 
Sbjct: 266 QHRLERHYGRGFKH 279



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 36/101 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L F  +  + ++G +    RLS++ +   I   Y   FR  P L+ I  +
Sbjct: 74  FLQGAALTIFLCFCSIWFSLLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLI 133

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  +  +  +P         + LN              A  
Sbjct: 134 YLGLPQLGVVPGAISAGIIALSLNYGAYLSEIFRAGILAVA 174


>gi|225862405|ref|YP_002747783.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus 03BB102]
 gi|225786434|gb|ACO26651.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus 03BB102]
          Length = 230

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|126654465|ref|ZP_01726197.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905]
 gi|126589071|gb|EAZ83288.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905]
          Length = 218

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 12/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFG 231
                   M   AK+ V  F + I++S+   F   L+     K    L   YI       
Sbjct: 4   YWQTMIWPMLEGAKMTVILFFIAILISIPFGFLLTLAVKSRIKPLSWLAHTYIYIMRGTP 63

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L           + F  P+L     IG   V   F++  +      AA+ AEI R GL+A
Sbjct: 64  LL-----LQLLLICFGLPML---PVIGEYLVLDRFVAACLGFILNYAAYFAEIFRGGLLA 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA  LGL+  + T  V+LPQ  R  +P L+++ + L+K+++L  AV   +L+ 
Sbjct: 116 IDKGQYEAAQVLGLSKWQTTTRVILPQMFRVALPALSNESVTLIKDTALLYAVAVPELLH 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              T +N+    I    I   IYL +++++ +F   L  +  
Sbjct: 176 FAQTAVNRDF-TIVPFFIAGAIYLIMTLILTVFFKWLEKRFK 216


>gi|160935368|ref|ZP_02082750.1| hypothetical protein CLOBOL_00263 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441726|gb|EDP19426.1| hypothetical protein CLOBOL_00263 [Clostridium bolteae ATCC
           BAA-613]
          Length = 224

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    ++++    +F  S   G ++         + H K G  +  +Y+   LI   P L
Sbjct: 16  LKGALVSLELTLTVFALSLFFGTIVGFLRY----NKHHKAGYRIATVYVE--LIRNTPML 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I   + L+F  P    +         P   +  + L+    A+IAEIVRSG+ ++P+G
Sbjct: 70  VQI---FFLYFGLPQFKIY--------LPALFAGILGLTINNTAYIAEIVRSGIQSIPKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  LGL        V+ PQA+R+I P L +Q++ +L  +SL   +   DL  V   
Sbjct: 119 QWEAANCLGLKPIHTFLDVIFPQALRNIFPSLINQFIMILFGTSLLSVLDIKDLTQVASI 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +Q  + +E+    + IY  +S++ +  +  +N + 
Sbjct: 179 LNSQNFRTLELFTFAIGIYYIMSVICSKILRYVNNRF 215



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-ANKLVAWICRVYVEVFRNIPPLVVIF 146
           A+L G + +  L  +    +   GT+VG  R +  +K    I  VYVE+ RN P LV IF
Sbjct: 14  ALLKGALVSLELTLTVFALSLFFGTIVGFLRYNKHHKAGYRIATVYVELIRNTPMLVQIF 73

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           FLY  +               G+ +NN
Sbjct: 74  FLYFGLPQFKIYLPALFAGILGLTINN 100


>gi|320334507|ref|YP_004171218.1| polar amino acid ABC transporter inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
 gi|319755796|gb|ADV67553.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
          Length = 272

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 68/188 (36%), Positives = 98/188 (52%), Gaps = 4/188 (2%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R       +     Y+  F     P LV I   +       VL        +   PE 
Sbjct: 84  VARLSANPVVRTAASAYVEFF--RNTPLLVQIF--FWNFGVLNVLPDAAKTWLNAHQPEQ 139

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            ++  ALS YT+++IAE +R+G+ ++P GQ EAA +LGL      RLV+LPQA R ++PP
Sbjct: 140 WAVIAALSVYTSSYIAETIRAGIQSIPHGQTEAAQSLGLGGLDTLRLVILPQAFRVVLPP 199

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L SQ+LNL KNSSLA  +G A+L   G  + + T +  E I      YL LS+ I   +N
Sbjct: 200 LGSQFLNLTKNSSLASQIGVAELFYYGTQVQSYTFRGFESITAITIAYLILSLAITGLLN 259

Query: 387 RLNAKIAL 394
            L A++ L
Sbjct: 260 LLMARLHL 267



 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 10/139 (7%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
            + + Q+I   LL + F + V  V+    ++N++L      + +            +  +
Sbjct: 3   RDTTQQLIAGALLILAFGFIVWQVHAGFARNNVTLDWSIFGKPSQ----------LTSGT 52

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL+G   T  LA   +  A ++GT+VG  RLSAN +V      YVE FRN P LV 
Sbjct: 53  YLTTILIGMWLTVRLALISIALALLLGTVVGVARLSANPVVRTAASAYVEFFRNTPLLVQ 112

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           IFF    VL+VLP    + 
Sbjct: 113 IFFWNFGVLNVLPDAAKTW 131


>gi|325293914|ref|YP_004279778.1| nopaline ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
 gi|325061767|gb|ADY65458.1| nopaline ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 228

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 8/236 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + F        L   + T    A      F LG+ L+L      R    +        
Sbjct: 1   MDIEFLKTSMPFLLKGLSTTATITAISVAIGFNLGLGLALM-----RLSENRFLAGFAKY 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y   F   G P LV + L Y     +    + N I    +S       +A++  TAA+ +
Sbjct: 56  YSMVF--RGTPLLVQLFLFYY-GLGQIGFIKGNAITWWVISDGARCAVMAMALNTAAYTS 112

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R GL++VP G  EAA A G++     R +  P A+R  +P   ++ + ++K +SLA 
Sbjct: 113 EILRGGLLSVPAGLKEAAKATGMSPFMRFRRIEFPLAIRQALPAYGNELILVVKGTSLAS 172

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   ++      +++QT    E+  +   IYL +++ + + +  L A +   E +
Sbjct: 173 TITVLEITGYAKRLMSQTFAIFEVFALAGAIYLVINLTLVMLIRMLEAHLMRHEAR 228



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +     +G  +   RLS N+ +A   + Y  VFR  P LV +F  
Sbjct: 13  LLKGLSTTATITAISVAIGFNLGLGLALMRLSENRFLAGFAKYYSMVFRGTPLLVQLFLF 72

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y  +  +  I  ++I   
Sbjct: 73  YYGLGQIGFIKGNAITWW 90


>gi|157362892|ref|YP_001469659.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157313496|gb|ABV32595.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 222

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      + L      +    KI + S    I +      LS +   +  + L   Y 
Sbjct: 1   MIFDFRTLAQYLPDFMEALLETLKIAIISCFFAISIGTIVGFLS-NTRSRLLRTLIEFY- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T  I   P LV +   Y +H+  P+L          +   F S  I  S  T A+I+EI
Sbjct: 59  -TGFIRSTPLLVQL---YFVHYGLPILN--------IMPTRFQSATITFSLNTGAYISEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL ++  GQ EAA +LGL+  +  RL++ PQ  R ++PPL SQ+  L+K++SLA  +
Sbjct: 107 IRGGLQSINIGQFEAAYSLGLSRFQTIRLIIFPQLFRIVLPPLVSQFSYLIKDTSLAAVL 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L  +       T + +E  +  M +Y ++  +++   N L   +   +++
Sbjct: 167 TIPELTYMARRAAATTYRPLESFIPPMLMYFAIYFILSFLSNTLEKHLQKNDQE 220



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 40/97 (41%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  + + + Y    +   + T  +A      A  IGT+VG    + ++L+  +   Y   
Sbjct: 2   IFDFRTLAQYLPDFMEALLETLKIAIISCFFAISIGTIVGFLSNTRSRLLRTLIEFYTGF 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            R+ P LV ++F++  +  +  +P           LN
Sbjct: 62  IRSTPLLVQLYFVHYGLPILNIMPTRFQSATITFSLN 98


>gi|307250612|ref|ZP_07532553.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306857353|gb|EFM89468.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 223

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L  +      K      +   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETNKQPCISKPTS---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEK----LTGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEKRFTRFER 220


>gi|218283496|ref|ZP_03489486.1| hypothetical protein EUBIFOR_02076 [Eubacterium biforme DSM 3989]
 gi|218215764|gb|EEC89302.1| hypothetical protein EUBIFOR_02076 [Eubacterium biforme DSM 3989]
          Length = 218

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF++ +++++    + ++      K +   YI  F   G P LV + + Y    
Sbjct: 20  LPLALVSFIIAMLIAIV-CAIIQYAKVPIAKNIVQFYIWIF--RGTPMLVQLFIMY---- 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F             +  I  S  T A+ AE +R  + +VP+GQMEA   +G++
Sbjct: 73  -------FGMQSIGVRISAITAAIIVFSLNTGAYCAETIRGSIESVPQGQMEAGYCVGMS 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    ++LPQA RS  P L +  ++L+K++SLA  +   ++      I  +T Q +++
Sbjct: 126 YMQIMMHIILPQAFRSAFPSLFNNLISLVKDTSLAANITVTEMFMQTERIAGRTYQFMQL 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   F+YL    ++         K+
Sbjct: 186 YIEVAFVYLIFCTVLTWLQAWGEKKL 211



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 35/95 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+    + G V T  LA    I A +I  +    + +   +   I + Y+ +FR  P L
Sbjct: 6   ESFPKIFISGIVITLPLALVSFIIAMLIAIVCAIIQYAKVPIAKNIVQFYIWIFRGTPML 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           V +F +Y  + S+               LN     
Sbjct: 66  VQLFIMYFGMQSIGVRISAITAAIIVFSLNTGAYC 100


>gi|194015816|ref|ZP_03054431.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Bacillus pumilus ATCC 7061]
 gi|194012171|gb|EDW21738.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Bacillus pumilus ATCC 7061]
          Length = 230

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 14/197 (7%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
             T L+R    K  + L  +Y+S   + G P  V + + +             F   +  
Sbjct: 47  LVTALARMSKIKALRWLFSIYVSA--VRGTPLFVQLFIIFY-----------FFPTFNIT 93

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              + S  IA S    A+ +EI+R+ +++VP+GQ EA  ++G+THRK    V+LPQA+R 
Sbjct: 94  LDPYPSAIIAFSLNVGAYASEIIRASVLSVPKGQWEAGYSIGMTHRKTLVRVILPQAVRV 153

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMI 381
            IPPL++ +++L+K++SLA  +  A+L      I      Q + I +    IY     ++
Sbjct: 154 SIPPLSNSFISLVKDTSLASQILVAELFRKSQEIAAANLDQILFIYMEAALIYWVFCFIL 213

Query: 382 ALFMNRLNAKIALKEKK 398
           +L  +++  ++     +
Sbjct: 214 SLVQHQIEKRLDRYVAR 230



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 1/83 (1%)

Query: 76  IVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           ++P+     S+   ++ G   T  LA    I    I  +    R+S  K + W+  +YV 
Sbjct: 10  VIPWDLLQQSFWPMVMQGIYYTIPLAIIAFIIGIFIALVTALARMSKIKALRWLFSIYVS 69

Query: 135 VFRNIPPLVVIFFLYKSVLSVLP 157
             R  P  V +F ++    +   
Sbjct: 70  AVRGTPLFVQLFIIFYFFPTFNI 92


>gi|146280413|ref|YP_001170566.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145568618|gb|ABP77724.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
          Length = 234

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 11/188 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 + L ++Y+  F   G   LV +   + L+F  P L  FN          F    
Sbjct: 54  SPLAPLRWLAVIYVEVF--RGSSLLVQL---FWLYFVLP-LPPFN-----VEMSAFAVAV 102

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+ AE++R  + +V RGQ EA  AL +T     R ++LPQA+ + IPP T+ 
Sbjct: 103 VGLGLNIGAYGAEVLRGAIRSVHRGQHEACHALNMTPLTRMRRIILPQALLAAIPPGTNL 162

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  +DL      +   T   +EI  + + IY  L+  I   M RL  
Sbjct: 163 LIELLKNTSLVSLITLSDLAFRARQLDQATLMTLEIFGLALVIYFVLAQTINFAMRRLEQ 222

Query: 391 KIALKEKK 398
           ++A    +
Sbjct: 223 RLARGRMR 230



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +   G + A     +    RLS    + W+  +YVEVFR    LV +F+L
Sbjct: 23  LLQGTWVTVKVTVFGSLLAIACALIAALARLSPLAPLRWLAVIYVEVFRGSSLLVQLFWL 82

Query: 149 YKSVLSVLPI 158
           Y  +      
Sbjct: 83  YFVLPLPPFN 92


>gi|330957731|gb|EGH57991.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 242

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 3/237 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L    F                 K+ V S  L I+L L     ++       +    
Sbjct: 6   MQNLGLSAFSLKGFGPLLLEGTWMTIKLAVLSLALSILLGLIG-ATAKLSSSALLRVPAQ 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y  T LI G+P LVL+ L +        +              F +  I L     A+ 
Sbjct: 65  IY--TTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYF 122

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++L 
Sbjct: 123 TETFRGAILSVPRGQIEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALV 182

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G ADLV         T Q    +++   IYL ++      +       A   ++
Sbjct: 183 SIIGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITSASNFALRWAERHYAAGTRE 239



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 41/83 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +    +LS++ L+    ++Y  + R IP LV+
Sbjct: 19  FGPLLLEGTWMTIKLAVLSLALSILLGLIGATAKLSSSALLRVPAQIYTTLIRGIPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 79  MLLIFYSLQTWLTMLTDAMEWEY 101


>gi|303253514|ref|ZP_07339653.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248385|ref|ZP_07530408.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302647624|gb|EFL77841.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306855123|gb|EFM87303.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 223

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L  +      K      +   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETNKQPCISKPTS---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEK----ITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEKRFTRFER 220


>gi|296271867|ref|YP_003654498.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096042|gb|ADG91992.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 216

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+     +     I + S ++G + S+    L R         +   YIS   I G 
Sbjct: 8   FEHLNDLLNGLWMTTWISLLSILIGFIFSIILC-LGRLSSNTFINFICRFYISA--IRGT 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + +                     P   +  I LS  TAAF AEI+R G   +
Sbjct: 65  PLLVQLTIVFY-----------FLPYWGINIPSIAAAIITLSMNTAAFQAEILRGGFQTI 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ E A + G T  +    + LPQ +R ++P LT++ ++++KNS+L   +   DL+ V
Sbjct: 114 PHGQKETAWSYGYTPFQCLYYIELPQVIRKVLPSLTNEIIDIIKNSALISTIAVIDLMRV 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                + T + IE  +    +YL L+  I++    + +++
Sbjct: 174 TQVYSSTTYRPIEFFVSAGLLYLLLTSCISILGRYIESRL 213



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 41/102 (40%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ ++    +   +L G   T W++   ++   I   ++  GRLS+N  + +ICR Y+  
Sbjct: 1   MLDFSVVFEHLNDLLNGLWMTTWISLLSILIGFIFSIILCLGRLSSNTFINFICRFYISA 60

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            R  P LV +  ++  +                + +N     
Sbjct: 61  IRGTPLLVQLTIVFYFLPYWGINIPSIAAAIITLSMNTAAFQ 102


>gi|213418515|ref|ZP_03351581.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 217

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        +            I V     G+V+ L A   +R F       + L++I  
Sbjct: 1   FDWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAG-FARTFGGWFANHIALVFIE- 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I G P +V +   Y   F  P+               F +  + +   + A+IAEI R
Sbjct: 59  -IIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEITR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +G 
Sbjct: 109 GAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGV 168

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 AELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 216



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G+    +IG   G  R         I  V++E+ R
Sbjct: 2   DWSAIWPAIPLLLEGAKMTLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIEIIR 61

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 62  GTPIVVQVMFIYFALPMAF 80


>gi|322832149|ref|YP_004212176.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167350|gb|ADW73049.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 238

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATR------LSRHFHEKTGKALPLLYISTFLIFGL-PTLVL 237
                 +   VL ++ +++ +                 + LP + +  F+ FG    L++
Sbjct: 17  LAVCALILGLVLAMIFAVWESAPWKPLSWLGTAWVTVLRGLPEILVVLFIYFGSSQLLMV 76

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +A  + ++     +     I    VSP F+   IALS   +A+ ++ +R  L AVP+GQ 
Sbjct: 77  LADGFSINLGLFAIPIKLPIENFEVSP-FVCGVIALSLLYSAYASQTLRGALKAVPQGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+   LG+        +++PQ  R  +P L++Q+L LLK+++L   +   DL+    +I 
Sbjct: 136 ESGQVLGMKKSAIFFRLIMPQMWRHALPGLSNQWLVLLKDTALVSLISVNDLMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     +I   IYL +++     + R+  +    E+
Sbjct: 196 TRTQEPFTWYVIAACIYLLVTLFSQFVIKRIELRTTRFER 235


>gi|291086480|ref|ZP_06355922.2| general amino acid ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291067532|gb|EFE05641.1| general amino acid ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 368

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+++G ++         I      TL   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINMALIIGLLS---------IVPMFCKTLPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  + PLVV + +Y     +  +                     T
Sbjct: 126 -----------YIAVWAVVYPLVVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPVVRILSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMSEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|15604848|ref|NP_219632.1| amino acid ABC transporter ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|76788844|ref|YP_327930.1| GlnP [Chlamydia trachomatis A/HAR-13]
 gi|166154350|ref|YP_001654468.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 434/Bu]
 gi|166155225|ref|YP_001653480.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|237802559|ref|YP_002887753.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis B/Jali20/OT]
 gi|237804476|ref|YP_002888630.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|255348491|ref|ZP_05380498.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 70]
 gi|255503033|ref|ZP_05381423.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 70s]
 gi|255506704|ref|ZP_05382343.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis D(s)2923]
 gi|301335603|ref|ZP_07223847.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis L2tet1]
 gi|3328528|gb|AAC67720.1| ABC Amino Acid Transporter Permease [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167374|gb|AAX50382.1| GlnP [Chlamydia trachomatis A/HAR-13]
 gi|165930338|emb|CAP03824.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis 434/Bu]
 gi|165931213|emb|CAP06778.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|231272776|emb|CAX09682.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273793|emb|CAX10576.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis B/Jali20/OT]
 gi|289525171|emb|CBJ14645.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis Sweden2]
 gi|296434718|gb|ADH16896.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis E/150]
 gi|296435645|gb|ADH17819.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis G/9768]
 gi|296436568|gb|ADH18738.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis G/11222]
 gi|296437505|gb|ADH19666.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis G/11074]
 gi|296438436|gb|ADH20589.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis E/11023]
 gi|297140004|gb|ADH96762.1| putative ABC-membrane transport protein, inner membrane component
           [Chlamydia trachomatis G/9301]
 gi|297748258|gb|ADI50804.1| GlnP [Chlamydia trachomatis D-EC]
 gi|297749138|gb|ADI51816.1| GlnP [Chlamydia trachomatis D-LC]
          Length = 214

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 13/205 (6%)

Query: 187 AKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             I   S V G VL     T  SR+F  +  K L   Y+    + G P  + I + Y   
Sbjct: 19  LLITAISLVCGFVLGWGIGTVNSRYFPCRISKFLGNFYVVA--VRGTPLFIQILIVY--- 73

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P L + N           ++  IAL+  +AA++AE VR+G+ A+P  Q EAA  LG 
Sbjct: 74  FGLPSLIKVNL-------SPLVAGLIALTLNSAAYLAENVRAGINALPVQQWEAAKVLGY 126

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +    +L PQ  ++I+P LT+++++L+K SS+ + VG  +L  V   I+ +    +E
Sbjct: 127 TGPQIFLHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPME 186

Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390
           + LI   +YL ++   + F      
Sbjct: 187 MYLICAGLYLIMTSAFSYFARLSEK 211


>gi|301299235|ref|ZP_07205522.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300215037|gb|ADJ79453.1| Glutamine transport system permease protein [Lactobacillus
           salivarius CECT 5713]
 gi|300853195|gb|EFK80792.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 217

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    V SF++G++L +      ++     G          FLI  +  L
Sbjct: 17  LEGLWVTLEVSVISIVLSFIIGLILGVIRYVKIKYLSAAVG----------FLIDIIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P L               ++   AL  + +A +AEIVRSG+ AVP G
Sbjct: 67  PLLLIIFFTYFGLPEL--------GLRMTPMLAAVTALVVFESAMLAEIVRSGIQAVPVG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + GLT+ +A   +++PQA++ +IPPL SQ+++L+K++SLA  +   +L+     
Sbjct: 119 QMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I +Q T   + + L+   +Y  +   ++L   RL  +  
Sbjct: 179 IYSQNTTYMVPMYLMIAVMYFVVCYCLSLVARRLEKRYG 217



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   ++ + IIG ++G  R    K ++      +++ RN+P 
Sbjct: 9   SWINLRFLLEGLWVTLEVSVISIVLSFIIGLILGVIRYVKIKYLSAAVGFLIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y  +  +
Sbjct: 69  LLIIFFTYFGLPEL 82


>gi|258541040|ref|YP_003175539.1| glutamine ABC transporter substrate-binding protein [Lactobacillus
           rhamnosus Lc 705]
 gi|257152716|emb|CAR91688.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 484

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  +     TM        F+ ++GI++             K  + +   +I  F   G
Sbjct: 279 WSTLMDGLRETMVLTIVAIFFATLVGILIGFLG-----VIPNKLCQGIATTFIYIF--RG 331

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 332 LPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 381

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 382 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 441

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 442 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 483



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            + ++ G   T  L    +  AT++G L+G   +  NKL   I   ++ +FR +P +V+ 
Sbjct: 279 WSTLMDGLRETMVLTIVAIFFATLVGILIGFLGVIPNKLCQGIATTFIYIFRGLPLMVLA 338

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 339 LFIYTGVPSL 348


>gi|253689072|ref|YP_003018262.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755650|gb|ACT13726.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 225

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 17/240 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +          +   L     T+   A   +   V G+VL+       +         
Sbjct: 1   MSYQWDFSAIWPYHQLLLEGLWGTIKIGATSILIGMVAGMVLAAMKMSPRQLLRLPAAML 60

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +             P LV     + +++  PV+    F         F +  IALS  + 
Sbjct: 61  I-------GFYRNTPALVHF---FWIYYALPVITPLTF-------SPFTAAVIALSAQSG 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF AE+ R  + ++  GQ E A ALG+    A R V+LPQA+R +IPP   +   L+K++
Sbjct: 104 AFYAEVYRGAISSIHAGQWEGAKALGMPKSTALRRVILPQALRRMIPPFIERSFELIKST 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SLA ++ +++L+     I +QT + +E+  +   +Y +L ++I+LF   +  +++L +++
Sbjct: 164 SLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIEKRLSLADRR 223



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 40/87 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   Y   +L G   T  +  + ++   + G ++ A ++S  +L+     + +  +R
Sbjct: 6   DFSAIWPYHQLLLEGLWGTIKIGATSILIGMVAGMVLAAMKMSPRQLLRLPAAMLIGFYR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           N P LV  F++Y ++  + P+      
Sbjct: 66  NTPALVHFFWIYYALPVITPLTFSPFT 92


>gi|325063243|gb|ADY66933.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 229

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 18/236 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +   +    F    N        +T+            LG V+++      R        
Sbjct: 1   MKGWNWEGFFEYLTNYYLFEGAMVTLGLTVFAMTAGLALGFVIAVMRMSKYRFLSGPA-- 58

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                Y  T++  G P LV + + Y      P L                S  I LS   
Sbjct: 59  -----YFYTWIFRGTPLLVQLIIIYT---GLPQL--------GIKLTVLQSTLIGLSLCE 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+++EIVR+G+ AVP+GQ+ AA A+G+T  +  R ++ PQA R IIPPL +    +LK 
Sbjct: 103 AAYLSEIVRAGIAAVPKGQINAARAIGMTEAQVMRYIVAPQAFRIIIPPLGNSVNGVLKT 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +S+A  +   +L+     +I +    +E+ ++    YL+++    L   R+  +  
Sbjct: 163 TSIASIISMEELLRRTQVLIQEKFLVLELFMVAALYYLAMTTAWELIQRRIEKRFG 218



 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 30/82 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + T  L    M     +G ++   R+S  + ++     Y  +FR  P LV +  
Sbjct: 17  YLFEGAMVTLGLTVFAMTAGLALGFVIAVMRMSKYRFLSGPAYFYTWIFRGTPLLVQLII 76

Query: 148 LYKSVLSVLPIPDHSIVLPFGM 169
           +Y  +  +            G+
Sbjct: 77  IYTGLPQLGIKLTVLQSTLIGL 98


>gi|312864860|ref|ZP_07725091.1| putative glutamine ABC transporter, permease protein GlnM
           [Streptococcus downei F0415]
 gi|311099987|gb|EFQ58200.1| putative glutamine ABC transporter, permease protein GlnM
           [Streptococcus downei F0415]
          Length = 235

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 11/218 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                            + V + ++ + L L    +S     K  KA+  +Y+  F    
Sbjct: 20  YFANFGQFAKGFFYTLGMAVCALIVALALGLIFGAMS-SSRNKLAKAIARVYVEVF--QN 76

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV     +                G+   P F +  + +  YT A+++E++RSG+ +
Sbjct: 77  TPLLVHFVFVFYGLSIL--------TNGAIKVPAFWTSVLCVGVYTGAYMSEVIRSGIES 128

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EAA++ G T+R+   +++LPQA+R IIPP+ +Q +NL+KN+S    +  AD++ 
Sbjct: 129 IPRGQTEAALSQGFTYRETMSIIILPQAVRIIIPPMINQVVNLIKNTSTVAIISGADIMF 188

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                   T   +       F+Y  +   +A +  R  
Sbjct: 189 TAKAWAYDTTNYVPAFAGAAFLYFIMCFPVASWGRRKE 226



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF  T  +A   +I A  +G + GA   S NKL   I RVYVEVF+N P LV   F+
Sbjct: 27  FAKGFFYTLGMAVCALIVALALGLIFGAMSSSRNKLAKAIARVYVEVFQNTPLLVHFVFV 86

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +           
Sbjct: 87  FYGLSILTNGAIKVPAFW 104


>gi|301155863|emb|CBW15331.1| arginine transporter subunit [Haemophilus parainfluenzae T3T1]
          Length = 209

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 7/213 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S ++G++LS+  T L  + +    K      I   L+ GLP ++++ L Y  
Sbjct: 1   MTLGLAICSLIVGLLLSIVFTALEANKYAFIAKPTA---IIIALLRGLPEILVVLLIYFG 57

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +      G       F     ALS   A++ ++ +R  + A+P+GQ E+  ALG
Sbjct: 58  STQVVEM----LTGEYIEFSAFGCGVFALSLIFASYASQTLRGAIQAIPKGQWESGAALG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+   G I   T +  
Sbjct: 114 LSRPYTFINLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLMRQAGYINTNTHEPF 173

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I   IYL ++++    + +L  +    E+
Sbjct: 174 TWYGIAALIYLVITLISQAGIRKLELRFTRFER 206


>gi|167720786|ref|ZP_02404022.1| polar amino acid uptake ABC transporter, PAAT family, permease
           protein [Burkholderia pseudomallei DM98]
          Length = 208

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 14/214 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S VLG+++ L    L R    +   A+   Y+S  L+ G P
Sbjct: 9   HTLPVLAKGAALTMKFAVASMVLGLIVGLLV-ALVRIGSNRLLSAIAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y                         +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYY-----------GLPDIGISLDPTAAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A+ +LGLTH +  R V+ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAASHSLGLTHVQTLRHVICPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +I  T Q + + L    IY  LS ++A    R
Sbjct: 175 QEVIASTFQPLPLYLAAAAIYWVLSTLLARLQGR 208



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G   T   A + M+   I+G LV   R+ +N+L++ I + YV + R  P LV +F 
Sbjct: 13  VLAKGAALTMKFAVASMVLGLIVGLLVALVRIGSNRLLSAIAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDIGISLDPTAAGIFTLTLN 97


>gi|161504005|ref|YP_001571117.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865352|gb|ABX21975.1| hypothetical protein SARI_02098 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 219

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I +     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLLEGAKMTLWISILGLAGGLVIGLAAG-FARTFGGWFANHIALIFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 33/79 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G+    +IG   G  R         I  +++E+ R
Sbjct: 4   DWSAIWPAIPLLLEGAKMTLWISILGLAGGLVIGLAAGFARTFGGWFANHIALIFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|218887871|ref|YP_002437192.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758825|gb|ACL09724.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 596

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/248 (26%), Positives = 112/248 (45%), Gaps = 18/248 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F +  V   L                  GL     ++         SF +G+ + +    
Sbjct: 358 FQWHVVFENLRSLLIWHFPTGRPDEMFLGLGGLAYSLLMAVIAISVSFFIGLAVGV---- 413

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    +  +   LLYI            LI + + ++F  PV+         T    F
Sbjct: 414 -GRSSSNRVFRIPCLLYIELIRGNP-----LIIVIFWVYFFIPVMFG-------TTLNVF 460

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S   AL+ +T A+IAEIVR+G+  +P GQ+EAA + GLT+ +A R ++LPQA++ +IP 
Sbjct: 461 WSATWALTAFTGAYIAEIVRTGIQNIPAGQVEAAYSTGLTYLQAMRRIVLPQALKQMIPA 520

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFM 385
           +  Q++ + K++SLA  +G  +L  V   I N+     +EI     F+Y      +++F 
Sbjct: 521 IVGQFIAIFKDTSLAFVLGVLELTFVAQGINNRLMIHPMEIYGTVAFLYFICCYSMSVFA 580

Query: 386 NRLNAKIA 393
            RL  +++
Sbjct: 581 ARLERRLS 588



 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+R    +  +      I  F     P L+ +   Y       +L         ++  EF
Sbjct: 84  LARLSLFRPLRVTATCVIEFF--RNTPLLIQLFFWYFAF--PAILPDNAREALFSIQFEF 139

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I LS YTA+F+AE++R+GL ++P+G +EAA + GL++ +  R ++LP A R+IIPP
Sbjct: 140 WCATIGLSIYTASFMAEVIRAGLQSIPKGLLEAAYSSGLSYFQVLRTIILPLAFRAIIPP 199

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L S++LN +KNSSLA+ VG A+L      + + T +  E       +YLSLS++I+  +N
Sbjct: 200 LGSEFLNNMKNSSLAMVVGVAELTWHAQQVESLTFKGFEATSAATVLYLSLSLIISFILN 259

Query: 387 RLNAKIAL 394
            +N ++ L
Sbjct: 260 GVNGRMRL 267



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 68  AGFEIDQGIVPYTSDSSYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
            G+E    ++ +T + +Y       IL G  NT  ++      A ++GT++G  RLS  +
Sbjct: 33  FGYEFKWSML-FTRNETYGVVMGAEILKGLANTVRISLISSALALLLGTMLGLARLSLFR 91

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
            +       +E FRN P L+ +FF Y +  ++LP      +           +     T 
Sbjct: 92  PLRVTATCVIEFFRNTPLLIQLFFWYFAFPAILPDNAREALFSIQFEFWCATIGLSIYTA 151

Query: 184 DTNAKIFVFSF 194
              A++     
Sbjct: 152 SFMAEVIRAGL 162



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  +A   +  +  IG  VG GR S+N++    C +Y+E+ R  P ++VIF++Y
Sbjct: 387 LGGLAYSLLMAVIAISVSFFIGLAVGVGRSSSNRVFRIPCLLYIELIRGNPLIIVIFWVY 446

Query: 150 KSVL 153
             + 
Sbjct: 447 FFIP 450


>gi|196034602|ref|ZP_03102010.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus W]
 gi|228944164|ref|ZP_04106543.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|195992645|gb|EDX56605.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus W]
 gi|228815553|gb|EEM61795.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 230

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|167646871|ref|YP_001684534.1| polar amino acid ABC transporter inner membrane subunit
           [Caulobacter sp. K31]
 gi|167349301|gb|ABZ72036.1| polar amino acid ABC transporter, inner membrane subunit
           [Caulobacter sp. K31]
          Length = 218

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 14/204 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +    +G+V+  F   L R       +    +Y+S   I G P LV + L Y   +
Sbjct: 23  VLLSLIGMGVGLVIG-FGLALMRLSRSPLLRWPAAIYVSA--IRGTPLLVQLFLIY---Y 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L            P  ++  I  S    A+  EI+RS + AV +GQ EAA  LG++
Sbjct: 77  GLPQL--------GVQLPPLLAAGIGFSINIGAYAGEILRSAIAAVDKGQWEAASVLGMS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+LPQA R+ + PL++ +++L+K++SLA  +   +L      I  +T +   +
Sbjct: 129 RGQALRRVILPQAARTAVAPLSNSFISLVKDTSLAATIQVPELFRQAQLITARTYEIFAM 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L    +Y  LS ++AL   RL  
Sbjct: 189 YLAAAALYWILSSVLALGQARLER 212



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  GM    +IG  +   RLS + L+ W   +YV   R  P LV +F +
Sbjct: 15  LLKGAGYTVLLSLIGMGVGLVIGFGLALMRLSRSPLLRWPAAIYVSAIRGTPLLVQLFLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  +       +    G  +N
Sbjct: 75  YYGLPQLGVQLPPLLAAGIGFSIN 98


>gi|225016647|ref|ZP_03705839.1| hypothetical protein CLOSTMETH_00556 [Clostridium methylpentosum
           DSM 5476]
 gi|224950611|gb|EEG31820.1| hypothetical protein CLOSTMETH_00556 [Clostridium methylpentosum
           DSM 5476]
          Length = 232

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 17/232 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL---LYIST 226
           F+ N               + VF+ +LG+++      +++ +  +TGK   L   L +  
Sbjct: 15  FIVNDRWLLFLDGFKVTIIMAVFATLLGVIIGTIV-AIAKVYSFQTGKLKILDKILSVYL 73

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +  G P +V + + Y             FI  ++V    +   IA    + A++AEIVR
Sbjct: 74  TVFRGTPIVVQLMIWY-------------FIILTSVDNGVLVAIIAFGINSGAYVAEIVR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++A+ +GQ EA  +LGL+  +  + ++LPQA ++I+P L ++ + LLK +S+   V  
Sbjct: 121 AGILAIDKGQTEAGRSLGLSSGQTMKSIILPQAFKNILPALGNELIALLKETSVVGYVAV 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            DL  VG  + ++T  A+  +L    +YL L I +     R+  ++   +++
Sbjct: 181 VDLTKVGDLVRSRTMDAVFPLLAVALVYLLLVIGLTAIQKRIERRLRQGDRR 232



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRVYVEVFRNIP 140
               L GF  T  +A    +   IIGT+V   ++ +      K++  I  VY+ VFR  P
Sbjct: 21  WLLFLDGFKVTIIMAVFATLLGVIIGTIVAIAKVYSFQTGKLKILDKILSVYLTVFRGTP 80

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            +V +   Y  +L+ +       ++ FG+
Sbjct: 81  IVVQLMIWYFIILTSVDNGVLVAIIAFGI 109


>gi|70732197|ref|YP_261953.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68346496|gb|AAY94102.1| probable permease of ABC transporter PA1341 [Pseudomonas
           fluorescens Pf-5]
          Length = 248

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG +L +      R    +    +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALLLGSILGVM-----RTVPNRLVSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  ++S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  AA A+G +  +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPRGQESAARAMGFSLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+++
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRLVEKKVSV 239



 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A ++G+++G  R   N+LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALLLGSILGVMRTVPNRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|323165731|gb|EFZ51517.1| glutamine transport system permease protein glnP [Shigella sonnei
           53G]
          Length = 219

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGTVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 4/210 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++                + +     ++               F   
Sbjct: 64  GTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSGAYIAEITRGTVLSIHKGFREA 123

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L L      R+          L  +    I  +      +L   +   +        
Sbjct: 124 GLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKD---TSLFIVIGVAELTRQGQEI 180

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G+  + E  S            ++ I+R
Sbjct: 181 IAGNFRALEIWSAVAVFYLIITLVLSFILR 210


>gi|323126803|gb|ADX24100.1| amino acid ABC transporter, permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 233

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 17/218 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+  +    + + VLG+++   +T       +K  + +  +Y+        P 
Sbjct: 25  FLKAFLYTLGVSLAALLLAMVLGVIIGGLSTA-----KQKGNRVIARVYVEF--YQNTPL 77

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           LV +   Y              I  S + P  F++    +  Y AA+IAE++RSG+ AVP
Sbjct: 78  LVQVVFMYY---------GLAIISKSFIMPSAFLTTVCCVGLYHAAYIAEVIRSGIEAVP 128

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA++ G T  +   L+++PQA+R+I+PPLT+Q +NL+KN+S+   +  ADL+   
Sbjct: 129 KGQTEAALSQGFTRLQTMSLIIIPQAVRTILPPLTNQVVNLIKNTSIVAIISGADLMFTA 188

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 T   +       F+Y  L   IA+F  R   +
Sbjct: 189 KVWAYDTTYYVPAFAGAAFLYFILCFPIAIFGRRQEER 226



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L  F+ T  ++ + ++ A ++G ++G    +  K    I RVYVE ++N P LV + F+
Sbjct: 25  FLKAFLYTLGVSLAALLLAMVLGVIIGGLSTAKQKGNRVIARVYVEFYQNTPLLVQVVFM 84

Query: 149 YKSV 152
           Y  +
Sbjct: 85  YYGL 88


>gi|328470611|gb|EGF41522.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 306

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYIS 225
                    T+  +     F+ VLG +L L     S          +       PL+++ 
Sbjct: 72  PYFFQGLISTLRLSIWGISFALVLGTLLGLARFSRSVWLRTPANAFIQLVRNIPPLVFVF 131

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +     L   +  +P   Q    G S +     S  + +   ++A+IA
Sbjct: 132 IFYFFISNQLIPLLGLEDLLRNYNGEPNALQSFLFGPSNLWENLASGVLCVGLLSSAYIA 191

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VR+GL ++ +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+  
Sbjct: 192 EVVRAGLQSIDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSIVS 251

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   ++  VG  + N +G   EI LI  F Y  +   ++L    +  K
Sbjct: 252 LISIQEMTFVGTEMANSSGYIFEIWLIVGFSYFLICFGLSLIFLYIEKK 300



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  L+  G+  A ++GTL+G  R S +  +      ++++ RNIPPL
Sbjct: 73  YFFQGLISTLRLSIWGISFALVLGTLLGLARFSRSVWLRTPANAFIQLVRNIPPL 127


>gi|325289250|ref|YP_004265431.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324964651|gb|ADY55430.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 239

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 4/233 (1%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    +        +     I V S  LG++L L    L R +       +  +Y+S 
Sbjct: 4   FSLDFALKQFPAVLSAVPVTLLIAVVSMFLGMILGLLI-ALCRIYKVPVLSKIAAVYVSF 62

Query: 227 FLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             I G P LV +    Y        L +          P      +A +   +A+ +E +
Sbjct: 63  --IRGTPILVQLYVFFYGTPIALGFLNREFAGIFPDEIPPLACALLAYTINASAYHSEYI 120

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RS L ++  GQ+EAA ++GLT  +    V+LPQA+   +P   + ++ L+K S++  A+ 
Sbjct: 121 RSALNSIDSGQIEAAYSVGLTTAQGICRVILPQALIIALPNFVNVFIGLIKGSAVVFAIK 180

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             ++++V   I ++  + +E+      IY  + +++   +  L  ++  +E K
Sbjct: 181 VVEIMAVAKIIASEGYRFLEMYFDAAIIYWVICLLLERLVALLEKRLRNREAK 233



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L     T  +A   M    I+G L+   R+    +++ I  VYV   R  P LV ++ 
Sbjct: 15  AVLSAVPVTLLIAVVSMFLGMILGLLIALCRIYKVPVLSKIAAVYVSFIRGTPILVQLYV 74

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
            +      L   +      F
Sbjct: 75  FFYGTPIALGFLNREFAGIF 94


>gi|302185658|ref|ZP_07262331.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
 gi|330950013|gb|EGH50273.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 248

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +      R    +    +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVIAWIIALILGSVLGVM-----RTVPNRLVSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRVIEKKVAV 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   N+LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVIAWIIALILGSVLGVMRTVPNRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|170767520|ref|ZP_02901973.1| histidine ABC transporter, permease protein HisM [Escherichia
           albertii TW07627]
 gi|170123854|gb|EDS92785.1| histidine ABC transporter, permease protein HisM [Escherichia
           albertii TW07627]
          Length = 238

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K    ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYHCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|293364950|ref|ZP_06611667.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307703201|ref|ZP_07640147.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|291316400|gb|EFE56836.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307623276|gb|EFO02267.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 225

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + V SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAVGSFILAMVLGIFFGAMS-TSKRPLLRVLARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   L+  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAVGSFILAMVLGIFFGAMSTSKRPLLRVLARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|229120015|ref|ZP_04249270.1| Amino acid ABC transproter, permease [Bacillus cereus 95/8201]
 gi|228663481|gb|EEL19066.1| Amino acid ABC transproter, permease [Bacillus cereus 95/8201]
          Length = 233

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 44  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 89

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + ++ RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 90  GAIALAIHNGAYITEIFRGSIQSIDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLG 149

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 150 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 209

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 210 EKRLQRKE 217


>gi|49476791|ref|YP_034685.1| amino acid ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|218901559|ref|YP_002449393.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus AH820]
 gi|228913104|ref|ZP_04076743.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|49328347|gb|AAT58993.1| amino acid ABC transporter, permease [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|218536304|gb|ACK88702.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus AH820]
 gi|228846509|gb|EEM91522.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 230

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|330984857|gb|EGH82960.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 242

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 3/237 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L    F                 K+ V S  L I+L L     ++       +    
Sbjct: 6   MQNLGLSAFSLKGFGPLLLEGTWMTIKLAVLSLALSILLGLIGAS-AKLSSSALLRVPAQ 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y  T LI G+P LVL+ L +        +              F +  I L     A+ 
Sbjct: 65  IY--TTLIRGIPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGAITLGFIYGAYF 122

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++L 
Sbjct: 123 TETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALV 182

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G ADLV         T Q    +++   IYL ++      +       A   ++
Sbjct: 183 SIIGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITSASNFALRWAERHYAAGSRE 239



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +  + +LS++ L+    ++Y  + R IP LV+
Sbjct: 19  FGPLLLEGTWMTIKLAVLSLALSILLGLIGASAKLSSSALLRVPAQIYTTLIRGIPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 79  MLLIFYSLQTWLTMLTDAMEWEY 101


>gi|328958175|ref|YP_004375561.1| putative ABC transporter [Carnobacterium sp. 17-4]
 gi|328674499|gb|AEB30545.1| putative ABC transporter [Carnobacterium sp. 17-4]
          Length = 226

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 14/234 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   L      +    +     I + S + G +L      + R    K    +  
Sbjct: 5   QWHYIFDPALAIDSFGYILKGLGYTLGISMVSMIFGTILGFLL-AIMRMSTSKIVSMIAR 63

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS   + G PTLV + + Y           F F           +  I  S  +AA+ 
Sbjct: 64  TYISF--MRGTPTLVFLFILY-----------FGFPFIGIQFKAVNAAIIGFSLSSAAYS 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+RS L +V  GQ EAA ALGL      R V++PQAMR  IPP+++ +L+L+K +SLA
Sbjct: 111 AEIIRSSLHSVDHGQWEAAYALGLKWSFIMRKVIIPQAMRIAIPPMSNVFLDLIKGTSLA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   ++      +  +    + + ++   IY ++  +  +F N L  + +L 
Sbjct: 171 AMITVPEIFQQAKIVGGREFDYMTMYILVALIYWAICSVFTIFQNYLEKRTSLY 224



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 43/100 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G   T  ++   MI  TI+G L+   R+S +K+V+ I R Y+   R  P LV +F 
Sbjct: 21  YILKGLGYTLGISMVSMIFGTILGFLLAIMRMSTSKIVSMIARTYISFMRGTPTLVFLFI 80

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           LY     +            G  L++   S   +    ++
Sbjct: 81  LYFGFPFIGIQFKAVNAAIIGFSLSSAAYSAEIIRSSLHS 120


>gi|294084529|ref|YP_003551287.1| ABC transporter permease [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664102|gb|ADE39203.1| ABC transporter permease protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 221

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 103/234 (44%), Gaps = 13/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +             + +    ++F+   +LG+ L LF   L R    K  +     
Sbjct: 1   MTYYWNFQSVFDNWWALAVGLGGTLRLFIVCLILGMSLGLFV-ALGRRSRTKAVRWASTA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++  F     P LV I      ++  P+L              F++  + +S  +AA+ A
Sbjct: 60  FVEFF--RNTPVLVQIL---WFYYALPIL-------APVEISPFIAAILGISLNSAAYSA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R G+ ++  GQ EAA A+G+   +  R ++LPQA+R I+P LT++ + + K S+LA 
Sbjct: 108 EIYRGGIQSIEPGQWEAAKAIGMNGLQVLRRIVLPQAIRRIVPALTNRGIEIFKMSTLAS 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            V + +++  G  I +     +E+  +   +++ +   +      +   ++  +
Sbjct: 168 VVAYVEMLQQGKLIASLNFNPLEVYTVVAALFMIILYPLVRVTYAVERHLSRSD 221



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 35/79 (44%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + S      A+ VG   T  L    +I    +G  V  GR S  K V W    +VE FRN
Sbjct: 7   FQSVFDNWWALAVGLGGTLRLFIVCLILGMSLGLFVALGRRSRTKAVRWASTAFVEFFRN 66

Query: 139 IPPLVVIFFLYKSVLSVLP 157
            P LV I + Y ++  + P
Sbjct: 67  TPVLVQILWFYYALPILAP 85


>gi|271502392|ref|YP_003335418.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345947|gb|ACZ78712.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 227

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 112/236 (47%), Gaps = 11/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
            ++   +    +      + + T   + V S ++ IVL L    L R         L   
Sbjct: 3   WLMNIDLSYLLKVFPQVLMYLPTTLLLAVVSMLVAIVLGLVL-ALVRESRFVVVSKLVEF 61

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS F   G+P+LV + + Y   F  P L                +  I  S   +A++A
Sbjct: 62  YISLF--RGIPSLVQLFIIY---FGLPQL-----FPSLNGLSAMTAAIIGFSLKNSAYMA 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+ L +V  GQ EA +++G+   +  R ++LPQAM + +P   + +++L+K++S+A 
Sbjct: 112 EIFRAALASVDFGQTEAGLSVGMNKVQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAF 171

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A+G ++L + G  I  ++ +  E  L+   IY  L ++ +   ++L  K++   ++
Sbjct: 172 ALGVSELFAEGKMIAAESLRFFETFLVVGLIYWMLIVVYSWLQSQLEKKLSHSRQR 227



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  LA   M+ A ++G ++   R S   +V+ +   Y+ +FR IP LV +F +Y  +
Sbjct: 23  LPTTLLLAVVSMLVAIVLGLVLALVRESRFVVVSKLVEFYISLFRGIPSLVQLFIIYFGL 82

Query: 153 LSVLP 157
             + P
Sbjct: 83  PQLFP 87


>gi|301022229|ref|ZP_07186144.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300397642|gb|EFJ81180.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
          Length = 347

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|269955927|ref|YP_003325716.1| polar amino acid ABC transporter inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
 gi|269304608|gb|ACZ30158.1| polar amino acid ABC transporter, inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
          Length = 217

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 98/227 (43%), Gaps = 14/227 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                  +         +     + + SF +G+V++L    L R         L   Y+S
Sbjct: 1   MDWDLFTSSLWPLVRGGLVGTLPLSLASFAIGLVIALGI-ALLRLSTHPVLSWLGRAYVS 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             LI G P LV + + +                   V   + S  +A S     + AE++
Sbjct: 60  --LIRGTPLLVQLFVIFY-----------GLPSIGVVIDPWPSAIVAFSLNVGGYAAEVM 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+ +++VP+GQ EAA  +G+      R V+LPQA R  +PPL++ +++L+K++SLA  + 
Sbjct: 107 RAAILSVPQGQWEAAYTIGMRRTTTLRRVVLPQAARVSVPPLSNTFISLVKDTSLASLIL 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            A+       I   T + + + L    +Y     +++    R+  K+
Sbjct: 167 VAEAFRAAQVIAAATSEFMLLYLQVALVYWLFCTVLSFGQGRIERKL 213



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 37/81 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L+ +      +I   +   RLS + +++W+ R YV + R  P LV +F ++  
Sbjct: 17  GLVGTLPLSLASFAIGLVIALGIALLRLSTHPVLSWLGRAYVSLIRGTPLLVQLFVIFYG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLN 172
           + S+  + D          LN
Sbjct: 77  LPSIGVVIDPWPSAIVAFSLN 97


>gi|254439200|ref|ZP_05052694.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198254646|gb|EDY78960.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 247

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 13/237 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               V+          L F          I V S ++ +VL L    L     ++  +  
Sbjct: 23  WGWYVVDPTTSSGWTNLKFMAFGAYYTILISVTSILISVVLGLLI-ALPGLSEKRGWRMF 81

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              Y+   ++  +P LVLI     +++  P +              F S  +AL+   +A
Sbjct: 82  NRTYVE--IVRSVPILVLIL---WVYYGLPTVSGITL-------SVFWSGVLALALSDSA 129

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F AEI R+G+ ++ RGQ EAA ++ L +R   R ++LPQA+R I+P L +Q + +LK SS
Sbjct: 130 FQAEIFRAGIQSIGRGQYEAAQSVSLNYRDTMRYIILPQAIRRILPALGNQLVYMLKMSS 189

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L   +G  +L      ++    + +EI  + +  YL L ++++  +     ++   +
Sbjct: 190 LVSVIGLQELTRRANELVVSEYRPLEIYSVLVLQYLFLILIVSAGVRWFERRLKASD 246



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 39/76 (51%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           +S  +    +  G   T  ++ + ++ + ++G L+    LS  +      R YVE+ R++
Sbjct: 33  SSGWTNLKFMAFGAYYTILISVTSILISVVLGLLIALPGLSEKRGWRMFNRTYVEIVRSV 92

Query: 140 PPLVVIFFLYKSVLSV 155
           P LV+I ++Y  + +V
Sbjct: 93  PILVLILWVYYGLPTV 108


>gi|153011130|ref|YP_001372344.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563018|gb|ABS16515.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 226

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +P  + L    L                      +     T L R F      ++   Y+
Sbjct: 1   MPDWLQLMVESLPTLLWAGLIFTIPLTLLSFAFGLTLGLLTALVRLFAPLWLSSIARFYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV + + +                       F +  I  S    A+ +EI
Sbjct: 61  WIF--RGTPLLVQLFVIFY-----------GLPSAGIYLDAFPAAVIGFSLSVGAYSSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ + AVP+GQ EAA ++G++ R+A    +LPQA R+ +PPL++ +++L+K++SLA A+
Sbjct: 108 IRAVISAVPKGQWEAAYSIGMSWRQALARTILPQATRTAVPPLSNSFISLVKDTSLAAAI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +L      I+  T + + + +    IYL +S +++    RL  +    
Sbjct: 168 TVPELFQSAQRIVATTYEPLILYIEAALIYLVMSSVLSALQVRLEKRFGRY 218


>gi|297206367|ref|ZP_06923762.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|297149493|gb|EFH29791.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 212

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  LS   +T+  +      S +LG V ++           K  +A+   YI  F    
Sbjct: 9   WSNLLSGFGVTIMISIISLCASLILGTVFAIME-----VVPNKIAQAVAHTYIELFRNIP 63

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              L++I + + L   + +               F +  I LS YT+AFIAE +R+G+ +
Sbjct: 64  ---LLVITMIFYLIVPQYLFK----------ISGFTAGCIGLSLYTSAFIAECIRAGINS 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQME A + G+T+ +A R V+LPQA +  IP L +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 VGDGQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQFINLIKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  I   + Q +   L+    YL L++ ++ +M  L  KIA
Sbjct: 171 QGDVIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLEKKIA 212



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 35/72 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +  + +L GF  T  ++   +  + I+GT+     +  NK+   +   Y+E+FRNIP L
Sbjct: 6   QNNWSNLLSGFGVTIMISIISLCASLILGTVFAIMEVVPNKIAQAVAHTYIELFRNIPLL 65

Query: 143 VVIFFLYKSVLS 154
           V+    Y  V  
Sbjct: 66  VITMIFYLIVPQ 77


>gi|294853534|ref|ZP_06794206.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|294819189|gb|EFG36189.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 252

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 13/243 (5%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             +        ++P  + L    L                      +     T L R F 
Sbjct: 15  FIIPITAKEPKLVPDWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFA 74

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
                ++   Y+  F   G P LV + + +                       F +  I 
Sbjct: 75  PVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFPAALIG 121

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL++ ++
Sbjct: 122 FTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFI 181

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    RL  + 
Sbjct: 182 SLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERRF 241

Query: 393 ALK 395
              
Sbjct: 242 GRY 244



 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 35  ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 94

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 95  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 125


>gi|325273127|ref|ZP_08139424.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324101732|gb|EGB99281.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 230

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 3/188 (1%)

Query: 214 KTGKALPLLYISTF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++  F   L+ G+P L+ + L Y                       F +  
Sbjct: 41  KTSSIKPLQWLGGFYSTLVRGVPELLWVLLIYFGTVGLMNTLGEALNMPGLELSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGLSKGRILSRIILPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T       ++   IYLSL+++    M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIGVTVTKAPFTFYMVAACIYLSLTVIAMTGMYFLEK 220

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 221 RAARGFAR 228


>gi|251787824|ref|YP_003002545.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247536445|gb|ACT05066.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 227

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 116/234 (49%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L + + +  + L +   T+       +F+ VLG+VL+L      R         L  +YI
Sbjct: 9   LSYLLKVFPQVLMYLPTTLLLAVVSMLFAIVLGLVLALI-----RESRFVVVSKLVEIYI 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G+P+LV + + Y   F  P L                +  I  S   +A++AEI
Sbjct: 64  SLF--RGIPSLVQLFIIY---FGLPQL-----FPSLNGLSAMTAAIIGFSLKNSAYMAEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L +V  GQ EA +++G+   +  R ++LPQAM + +P   + +++L+K++S+A A+
Sbjct: 114 FRAALASVDFGQTEAGLSVGMNKVQIYRRIVLPQAMLNALPATGNTFISLIKDTSVAFAL 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G ++L + G  I  ++ +  E  L+   IY  L ++ +   ++L  K++   ++
Sbjct: 174 GVSELFAEGKMIAAESLRFFETFLVVGLIYWLLIVVYSWLQSQLEKKLSHSRQR 227



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  LA   M+ A ++G ++   R S   +V+ +  +Y+ +FR IP LV +F +Y  +
Sbjct: 23  LPTTLLLAVVSMLFAIVLGLVLALIRESRFVVVSKLVEIYISLFRGIPSLVQLFIIYFGL 82

Query: 153 LSVLP 157
             + P
Sbjct: 83  PQLFP 87


>gi|228476976|ref|ZP_04061614.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus salivarius SK126]
 gi|228250995|gb|EEK10166.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus salivarius SK126]
          Length = 307

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 113/292 (38%), Gaps = 11/292 (3%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
               +  +VG   L     +A +    VE+      ++ +  +    ++           
Sbjct: 11  LPWYLQVVVGLIGLRVVVALANLLSWLVEILWGY--VLQLVTIVFKWIASWMPAGKLFSW 68

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                   + +    LT+        F  +L +V ++      R  +       P+  + 
Sbjct: 69  KAVFDAVPQIVERLPLTLGLTIAGAFFGLILALVFAVVKINRVRILY-------PIQAVF 121

Query: 226 TFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              + G P LV + L Y     F + +  +F         P  +    A +   AA+++E
Sbjct: 122 VSFLRGTPILVQLMLTYYGIPLFLRYLNAEFGLDWNINEIPPAIFAITAFAFNEAAYMSE 181

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA +
Sbjct: 182 TIRAAIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFS 241

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            G  ++ +    +     +  E  +    +Y ++SI+I      +   +A+K
Sbjct: 242 AGIVEMYAQAQILGGADYRYFERYISVALVYWAISILIEYIGRSVENHMAIK 293


>gi|126737006|ref|ZP_01752741.1| probable amino acid ABC transporter, permease protein [Roseobacter
           sp. SK209-2-6]
 gi|126721591|gb|EBA18294.1| probable amino acid ABC transporter, permease protein [Roseobacter
           sp. SK209-2-6]
          Length = 324

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 15/279 (5%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GR S   +   I    V     +   +  +  +  + ++     +S  L FG F+  +  
Sbjct: 58  GRFSVALVAFLIGGGVVYALLGLRRRLQAYLTWAVLAAIALGLFYSFDLSFG-FIGKKLP 116

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
              +    T   +   S  L  V +L A   ++       + +   Y S F   G P LV
Sbjct: 117 YLLSQGAVTTLYVSAISITLAFVFAL-AGATAKLSGIGILEGIGSFYTSYF--RGTPLLV 173

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            + L Y                   V     +   ALS    A++ EI RSG+ ++P GQ
Sbjct: 174 QLFLIY-----------LGLPQIGFVVDPVPAAIAALSLVYGAYMTEIFRSGIQSLPAGQ 222

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALGL      R V+LPQAMR IIPP  +Q++ +LK+SSL   VG  DL+ +  T+
Sbjct: 223 WEAADALGLHRMVTFRKVILPQAMRVIIPPTGNQFIAMLKDSSLVSVVGVWDLMFLARTV 282

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                + +E+++    +Y  +SI++ L   R+    +  
Sbjct: 283 GRSDFKILEMLITASIVYWLMSIVLELVQKRIELHFSKS 321



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T +++   +  A +        +LS   ++  I   Y   FR  P LV +F +Y  
Sbjct: 122 GAVTTLYVSAISITLAFVFALAGATAKLSGIGILEGIGSFYTSYFRGTPLLVQLFLIYLG 181

Query: 152 VLSV 155
           +  +
Sbjct: 182 LPQI 185


>gi|255526252|ref|ZP_05393169.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296186246|ref|ZP_06854650.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255510032|gb|EET86355.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296049047|gb|EFG88477.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 223

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 13/231 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + F +                   + + S +LG+ ++L    L    +       PLL
Sbjct: 1   MKVNFDINYMMGIFPLLLKYTHLTISLALISMILGLSIALI---LVIILNYDIKLINPLL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +      G P LV + L Y  L    P+L   N          + +  I LS  ++A++
Sbjct: 58  KVYISFFRGTPLLVQLFLLYYGLPQIIPILKNIN---------AYTAAIIGLSMNSSAYM 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+R  + +V +GQMEA  ALG+T  +  + ++LPQA R  IP L + +++LLK+SSLA
Sbjct: 109 VEILRGAIGSVDKGQMEAVKALGMTSWQGMKRIVLPQAARVAIPALGNTFVDLLKSSSLA 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++        T +  E  L    IY  + I        L  ++
Sbjct: 169 FTLGVAEILAQAQMSAAATYKFFENYLAVALIYWVIIIFFNHIQKILEVRM 219


>gi|317402648|gb|EFV83206.1| amino acids ABC transporter [Achromobacter xylosoxidans C54]
          Length = 238

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 97/184 (52%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L + ++ +++ + +L L+   +  +F  P++      G +T+        +AL
Sbjct: 50  RISPYRALRWPASAMVYLVRSLPLLMFIFWAYFFVPLIIGRPVAGTTTM-------VVAL 102

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
            CY +A++AEI+R+G+ A+P GQ EA  ALGL++ +  R V+LPQA+ +++P + SQ+++
Sbjct: 103 VCYESAYLAEIIRAGIQALPPGQQEAGRALGLSYMQTMRRVILPQALYNMLPSMLSQFVS 162

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K +SLA  +   +L      I +    +  E+  +    Y  L+  ++  ++    +I
Sbjct: 163 TVKETSLAYVISVQELTYAANQINSVLLTKPFEVFALLALTYFILNFGLSALVHLTEKRI 222

Query: 393 ALKE 396
             + 
Sbjct: 223 GSRR 226



 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  LA   +  A   G L+  GR+S  + + W     V + R++P L+ IF+ Y  
Sbjct: 24  GLAATLGLAAVSLALALPCGVLLALGRISPYRALRWPASAMVYLVRSLPLLMFIFWAYFF 83

Query: 152 VLSVLPIP 159
           V  ++  P
Sbjct: 84  VPLIIGRP 91


>gi|300817472|ref|ZP_07097688.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300824984|ref|ZP_07105083.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300925984|ref|ZP_07141807.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|301326286|ref|ZP_07219659.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|300417928|gb|EFK01239.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300522550|gb|EFK43619.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529770|gb|EFK50832.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300846987|gb|EFK74747.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|323183030|gb|EFZ68429.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 1357]
 gi|324020753|gb|EGB89972.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
          Length = 347

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|153951698|ref|YP_001398010.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939144|gb|ABS43885.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 250

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 18/252 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L  I   +         P         +   +  ++    T++ +      + + G +  
Sbjct: 11  LRQILTSWGLYNENSISPFAVWKFLDALDNKDAFINGFIYTLEVSILALFIATIFGTIGG 70

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           + A         K  +A   +Y+  F         L+   + L +  PVL          
Sbjct: 71  VMA-----TSRFKIIRAYTRIYVELFQNVP-----LVIQIFFLFYALPVL--------GI 112

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F    + +  Y  A+++E+VRSG++AVPRGQ EA+ + G T+ +  R +++PQ +R
Sbjct: 113 RLDIFTIGVLGVGAYHGAYVSEVVRSGILAVPRGQFEASASQGFTYIQQMRYIIVPQTIR 172

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP+T+Q +NL+KN+S+ + VG A+L+    +     G      +    +Y  +   +
Sbjct: 173 IILPPMTNQMVNLIKNTSVLLIVGGAELMHSADSYAADYGNYASAYIFAAVLYFIICYPL 232

Query: 382 ALFMNRLNAKIA 393
           A F      K+ 
Sbjct: 233 AYFAKAYENKLK 244



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 46/87 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A + GF+ T  ++   +  ATI GT+ G    S  K++    R+YVE+F+N+P ++ IF
Sbjct: 42  DAFINGFIYTLEVSILALFIATIFGTIGGVMATSRFKIIRAYTRIYVELFQNVPLVIQIF 101

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           FL+ ++  +    D   +   G+   +
Sbjct: 102 FLFYALPVLGIRLDIFTIGVLGVGAYH 128


>gi|26987806|ref|NP_743231.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982503|gb|AAN66695.1|AE016297_9 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|313497436|gb|ADR58802.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 248

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      ++ + +LG +L +      R    +    +   Y+  F    +P
Sbjct: 24  WYITGLGWTIAIAITAWIIALLLGSLLGVM-----RTVPNRLVSGIATAYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +   +S+ I L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPEGLQEWFKQDLNPTTSALISVVICLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G +  +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMRMVEKKVAV 239



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A +  I A ++G+L+G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWYITGLGWTIAIAITAWIIALLLGSLLGVMRTVPNRLVSGIATAYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQEWFKQD 103


>gi|239630723|ref|ZP_04673754.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239527006|gb|EEQ66007.1| ABC-type amino acid transport/signal transduction system
           [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 18/233 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                  +  N   L                F+ ++GI++ L           K  + + 
Sbjct: 268 DRSFFGLLKTNWGTLMSGLEETMVLTVVAIFFATLVGILVGLLG-----VLPNKFAQGVA 322

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             +I  F   GLP +VL    Y      P L         +  P F++  + L+    A+
Sbjct: 323 TTFIYIF--RGLPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAY 370

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            A  V+ G+ AV  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+
Sbjct: 371 TAAFVKGGIQAVDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSI 430

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +G  +L   G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 431 LSIIGLLELTQTGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 483



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 35/72 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    ++ G   T  L    +  AT++G LVG   +  NK    +   ++ +FR +P +V
Sbjct: 277 TNWGTLMSGLEETMVLTVVAIFFATLVGILVGLLGVLPNKFAQGVATTFIYIFRGLPLMV 336

Query: 144 VIFFLYKSVLSV 155
           +  F+Y  V S+
Sbjct: 337 LALFIYTGVPSL 348


>gi|229588678|ref|YP_002870797.1| glutamate/aspartate ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229360544|emb|CAY47401.1| glutamate/aspartate ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 248

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      ++ + +LG +L +      R    +    +   Y+  F    +P
Sbjct: 24  WYIAGLGWTIAIAVVAWIIALLLGSILGVM-----RTVPNRLVSGIATCYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L  +     +  +  ++S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDMLPQNLQDWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPRGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAV 239



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A ++G+++G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWYIAGLGWTIAIAVVAWIIALLLGSILGVMRTVPNRLVSGIATCYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDMLPQNLQDWYKQD 103


>gi|327383907|gb|AEA55383.1| hypothetical protein LC2W_3058 [Lactobacillus casei LC2W]
 gi|327387088|gb|AEA58562.1| hypothetical protein LCBD_3073 [Lactobacillus casei BD-II]
          Length = 487

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +S    TM        F+ ++GI++ L           K  + +   +I  F   G
Sbjct: 282 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLG-----VLPNKFAQGVATTFIYIF--RG 334

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 335 LPLMVLALFIYN---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 384

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 385 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 444

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 445 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 486



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  L    +  AT++G LVG   +  NK    +   ++ +FR +P +V+ 
Sbjct: 282 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLGVLPNKFAQGVATTFIYIFRGLPLMVLA 341

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 342 LFIYNGVPSL 351


>gi|257057820|ref|YP_003135652.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256587692|gb|ACU98825.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 269

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 23/262 (8%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            LV     + +    +     ++      F      +     + T A  F    V+G+VL
Sbjct: 21  VLVFALLAFLADWETIKDAFFNVEAASAQFPEILSTALVNTIVYT-ALGFGLGLVIGMVL 79

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +L      +       + L  LYI  F       LV IAL Y +                
Sbjct: 80  ALM-----KLSSVGPYRWLATLYIEFFRGIPA-LLVFIALGYGVPLAF-----------G 122

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                + +  IAL    +A+IAE +R+G+ AVP+GQ+EAA +LG++  + T  V++PQA 
Sbjct: 123 IRFDIYSTAAIALGLVGSAYIAETLRAGIQAVPKGQVEAARSLGMSQARTTVTVVIPQAF 182

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           R I+PPLT++ + L K+SSL   +G A    +L   G   +N TG ++  IL+    YL 
Sbjct: 183 RIILPPLTNELILLTKDSSLIYLLGLAREEYELAKFGREGLNATG-SLTPILLAGVCYLI 241

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           +++ +      L  +   KE++
Sbjct: 242 ITVPLGYLSRYLERRSGRKEER 263



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 29/72 (40%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            VNT      G     +IG ++   +LS+     W+  +Y+E FR IP L+V   L   V
Sbjct: 58  LVNTIVYTALGFGLGLVIGMVLALMKLSSVGPYRWLATLYIEFFRGIPALLVFIALGYGV 117

Query: 153 LSVLPIPDHSIV 164
                I      
Sbjct: 118 PLAFGIRFDIYS 129


>gi|189022725|ref|YP_001932466.1| Cystine transport system permease protein [Brucella abortus S19]
 gi|237817022|ref|ZP_04596014.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260756561|ref|ZP_05868909.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260763232|ref|ZP_05875564.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882379|ref|ZP_05893993.1| amino acid ABC transporter permease [Brucella abortus bv. 9 str.
           C68]
 gi|261216130|ref|ZP_05930411.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|297249512|ref|ZP_06933213.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|189021299|gb|ACD74020.1| Cystine transport system permease protein [Brucella abortus S19]
 gi|237787835|gb|EEP62051.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260673653|gb|EEX60474.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676669|gb|EEX63490.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260871907|gb|EEX78976.1| amino acid ABC transporter permease [Brucella abortus bv. 9 str.
           C68]
 gi|260917737|gb|EEX84598.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|297173381|gb|EFH32745.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
          Length = 250

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 13/255 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
              ++     +   +        ++P  + L    L                      + 
Sbjct: 1   MHFLLCMFIPARFIIPITAKEPKLVPDWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLA 60

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               T L R F      ++   Y+  F   G P LV + + +                  
Sbjct: 61  LGLLTALVRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIG 107

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA 
Sbjct: 108 IYLDAFPAALIGFTLNIGAYSSEIIRTVISSVPKGQWEAAYSIGMSWRQALIRTILPQAT 167

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +PPL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +
Sbjct: 168 RTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSI 227

Query: 381 IALFMNRLNAKIALK 395
           ++    RL  +    
Sbjct: 228 LSALQVRLERRFGRY 242



 Score = 36.8 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 33  ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 92

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 93  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 123


>gi|161525299|ref|YP_001580311.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|221214043|ref|ZP_03587016.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|160342728|gb|ABX15814.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|221166220|gb|EED98693.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
          Length = 260

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 42  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 98

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 99  LLFYSIQIWLNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEA 158

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 159 GAAYGMSGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 218

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 219 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 257



 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 37  FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 96

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 97  MLLLFYSI 104


>gi|291455132|ref|ZP_06594522.1| glutamate transporter permease [Streptomyces albus J1074]
 gi|291358081|gb|EFE84983.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 412

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 26/251 (10%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           ++   +                  +    L     T+   A   V S VLG VL++    
Sbjct: 163 WILYLLFDTDQFTTAKWRPFAYTGIQELLLRGLGNTLKAFAYASVLSLVLGGVLAV---- 218

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    +  + +  + +  F                     PVL    F+  +      
Sbjct: 219 -GRLSDHRPVRWVATVIVEFFR------------------AMPVLVMIFFVFVALQVQAL 259

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L   L+ Y  + +AE+ RSG+ +V +GQ EAA ALG+   +    VL PQA+R+++P 
Sbjct: 260 PALVTGLTLYNGSVLAEVFRSGVNSVDKGQREAAYALGMRKTQVMVQVLAPQALRAMLPA 319

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIAL 383
           + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ + ++++ 
Sbjct: 320 IISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGMCMLLSW 379

Query: 384 FMNRLNAKIAL 394
           F   ++ +   
Sbjct: 380 FAQWVSRRQRR 390



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 58/157 (36%), Gaps = 25/157 (15%)

Query: 2   IKNARKTVTRYFSRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSN 56
              +R            LYD      R  +    ++  L +  I  W +           
Sbjct: 117 ALGSRPMTATSEQEPSALYDVPGPKARKRHRIFGVLATLAIAAILGWILY---------- 166

Query: 57  LSLGIGFLSERAGFEIDQG-IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
                  L +   F   +     YT        +L G  NT        + + ++G ++ 
Sbjct: 167 ------LLFDTDQFTTAKWRPFAYTG---IQELLLRGLGNTLKAFAYASVLSLVLGGVLA 217

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            GRLS ++ V W+  V VE FR +P LV+IFF++ ++
Sbjct: 218 VGRLSDHRPVRWVATVIVEFFRAMPVLVMIFFVFVAL 254


>gi|288961242|ref|YP_003451581.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913550|dbj|BAI75037.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 243

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 6/210 (2%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDK 248
              S +LG   +L    L R        A    Y+  F+  G P L+ + + Y  L   +
Sbjct: 24  TACSILLGGAGALVL-ALMRTSGVALLSAPARAYV--FVFRGTPLLIQLFMIYYGLGQFR 80

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P L +      S     +    +A++  TAA+ +EI+R GL +VP G +EAA A G+   
Sbjct: 81  PALQELGL--WSFFRDPYWCAVLAMAMNTAAYSSEIIRGGLNSVPPGALEAASACGMRPL 138

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R ++LP A+R  +P   ++ + + K +SLA  +   ++  + G +I QT +A+EI  
Sbjct: 139 MRLRRIVLPLAIRQALPAYGNELVLMAKATSLASTITLMEVTGLAGKMIAQTYRAVEIFA 198

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               IYL+L+ ++   +  L   ++ + + 
Sbjct: 199 CAGIIYLALTFILTRAILVLEWWLSPRRRH 228



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 26/74 (35%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
               ++       ++   R S   L++   R YV VFR  P L+ +F +Y  +    P  
Sbjct: 24  TACSILLGGAGALVLALMRTSGVALLSAPARAYVFVFRGTPLLIQLFMIYYGLGQFRPAL 83

Query: 160 DHSIVLPFGMFLNN 173
               +  F      
Sbjct: 84  QELGLWSFFRDPYW 97


>gi|298529735|ref|ZP_07017138.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511171|gb|EFI35074.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 229

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 8/206 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +  FVL + L++      R             Y  TF   G P LV I L Y    
Sbjct: 23  FLSVLLGFVLAVPLAVMRVSRLRCLWMPV-------YAFTFYFRGTPLLVQIFLIYYGSG 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V      +     SP F S  +AL+  TAA+ AEI R G+  VPRG++EAA A G++
Sbjct: 76  QFQVFLDSVGLWHFFKSPWFCS-VLALTLNTAAYSAEIFRGGIQGVPRGEVEAARACGMS 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +++P+A+R   P  T++ + LL+ SSL   +   D+  V   I  ++    E+
Sbjct: 135 GLLLYRRIVIPKALRIAWPAYTNEVIFLLQASSLVSIITVMDITGVAREISARSFAFYEL 194

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            L    IYL L   I     R+  +I
Sbjct: 195 FLAAAAIYLVLVYGILWIFKRIENRI 220



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  + F  ++   ++   +   R+S  + +      +   FR  P LV IF +
Sbjct: 11  LLGGAVITLEITFLSVLLGFVLAVPLAVMRVSRLRCLWMPVYAFTFYFRGTPLLVQIFLI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y          D   +  F      
Sbjct: 71  YYGSGQFQVFLDSVGLWHFFKSPWF 95


>gi|323173470|gb|EFZ59099.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli LT-68]
          Length = 347

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|297156743|gb|ADI06455.1| putative glutamate ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 313

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 112/256 (43%), Gaps = 17/256 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +I F+   +            +     + N  +S    T+   A   V S  LG+VL++ 
Sbjct: 32  LIAFVVMRLNDKGQFAPEMWDIFNYAGVRNDIISGLLTTLQVFAVAAVLSLALGVVLAV- 90

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R    K  +     +I  F    +P L+ I   + L         F   G     
Sbjct: 91  ----GRLSDHKWVRLFTTGFIELF--RAVPLLITIYALWVLFLTYKNDLGFTGDG----- 139

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
            EF +L + L+ Y  +  AE++R+G+ +VP+GQ EAA ALG+   +    +L+PQ +R++
Sbjct: 140 TEFWALVVGLTIYNGSVQAEVLRAGINSVPKGQSEAAYALGMRKTQVMVTILIPQGVRAM 199

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLS 378
           +P + SQ +  LK++SL   + + +L+     I   T        +++I++   IY++L 
Sbjct: 200 LPTIISQLVVTLKDTSLGYVITYQELLYKVQHIAEVTVVNDESPYVQVIIVGGVIYVALC 259

Query: 379 IMIALFMNRLNAKIAL 394
           + ++     +  +   
Sbjct: 260 MALSALATWIERRGRR 275



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 29/146 (19%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      R+ N    +I  L +  +  + V                  L+++  F
Sbjct: 3   ASVLYDAPGPKARIRNRVYSVIGTLAVIGLIAFVVMR----------------LNDKGQF 46

Query: 71  EIDQGIVPYTSDSSYATA---ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             +   +      +YA     I+ G + T  +     + +  +G ++  GRLS +K V  
Sbjct: 47  APEMWDI-----FNYAGVRNDIISGLLTTLQVFAVAAVLSLALGVVLAVGRLSDHKWVRL 101

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVL 153
               ++E+FR +P L+ I+ L+   L
Sbjct: 102 FTTGFIELFRAVPLLITIYALWVLFL 127


>gi|295675493|ref|YP_003604017.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295435336|gb|ADG14506.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 214

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS     + T   + + S V   ++ LFA  L R F       +  LY   F   G P L
Sbjct: 10  LSILLQGLVTTLLLSIASIVGSTLIGLFAAVL-RSFGPWGTDRIARLYTELF--RGTPVL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y           F           F +  I LS Y  A+IAEI RSG+ AVP+G
Sbjct: 67  ITLMFIY-----------FGVSYFGYAIDVFAAGVIGLSVYQGAYIAEIFRSGIEAVPKG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E +  LGLT  +A   V+LPQ  + ++PPL  QYL+L+K++S+   +G ++L+  G  
Sbjct: 116 QWEVSQILGLTRAQAFSFVVLPQTGKIVLPPLVGQYLSLIKDTSIVSMIGMSELMHGGQA 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I+++ G+ +EI  +   IY ++   ++ ++   + +
Sbjct: 176 IVDRIGKPVEIYGLVALIYFAVCFPLSQWVRHHDRR 211



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L+ + ++ +T+IG      R         I R+Y E+FR  P L+ + F+
Sbjct: 13  LLQGLVTTLLLSIASIVGSTLIGLFAAVLRSFGPWGTDRIARLYTELFRGTPVLITLMFI 72

Query: 149 YKSV 152
           Y  V
Sbjct: 73  YFGV 76


>gi|237730188|ref|ZP_04560669.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908794|gb|EEH94712.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 368

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+++G  +         I      T+   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRVNLALIIGLAS---------IVPMFWKTIPHRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ ++  I P+VV + +Y     +  +                     T
Sbjct: 126 -----------YIAIWAVIYPIVVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPWGILLAL-----GRRSHMPVVRVLSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMSEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|190895141|ref|YP_001985434.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700802|gb|ACE94884.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 216

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 14/226 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++   L      +     +   +F  G ++ +    L R       +    LYI  F   
Sbjct: 5   ISVNDLWMLMEGLKWTVLLSAIAFAGGGIVGVMI-ALMRTSPYALPRWFAYLYIEVF--Q 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + Y                       +++  I L+ +++AF+ EI R G+ 
Sbjct: 62  GTPLLMQLFVFYY-----------GVALVGLDVSAWIAAAIGLTAHSSAFLGEIWRGGIE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ EAA ALGL +R     V+LPQA +  +P      + L+K +SL   +GF +L 
Sbjct: 111 AVPLGQTEAARALGLPYRHRMLDVVLPQAFKISLPATIGFLVGLVKGTSLVAIIGFTELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             G  I N T Q + +  +   IY +L   ++L    L  +++   
Sbjct: 171 RAGQIISNNTFQPLIVFGMVGAIYFALCWPLSLLSGHLEKRMSFGR 216



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 36/102 (35%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  L+        I+G ++   R S   L  W   +Y+EVF+  P L+ +
Sbjct: 10  LWMLMEGLKWTVLLSAIAFAGGGIVGVMIALMRTSPYALPRWFAYLYIEVFQGTPLLMQL 69

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F  Y  V  V       I    G+  ++             A
Sbjct: 70  FVFYYGVALVGLDVSAWIAAAIGLTAHSSAFLGEIWRGGIEA 111


>gi|89098934|ref|ZP_01171814.1| amino acid ABC transproter, permease [Bacillus sp. NRRL B-14911]
 gi|89086338|gb|EAR65459.1| amino acid ABC transproter, permease [Bacillus sp. NRRL B-14911]
          Length = 215

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 16/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S  + I + LF   L +    K  + +  +YI  FL+ G P +V I + Y  
Sbjct: 20  LTFELTIVSVFIAIFIGLFFAFL-KISRIKVLEWIADIYI--FLVRGTPLVVQIFIFY-- 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F   S    +F+++ + L+ +  A+IAEI R  + ++ +GQMEA  +LG
Sbjct: 75  -----------FGLTSLNISQFLAVVLGLAFHNGAYIAEIFRGSIQSIEKGQMEAGRSLG 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++   A R ++LPQA+R  +PPL +Q++  LK+SSLA  +G  +L +V  T  +     +
Sbjct: 124 MSAGLAMRRIILPQAVRRALPPLGNQFIIALKDSSLASFIGMYELFNVATTYGSNEYDYM 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +LI    YL L ++ +  ++ +  ++A+ +
Sbjct: 184 SYLLIVAVYYLILVLVFSFLVSIIEKRMAISD 215



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 58/159 (36%), Gaps = 3/159 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G + TF L    +  A  IG      ++S  K++ WI  +Y+ + R  P +V IF 
Sbjct: 13  VFLRGMLLTFELTIVSVFIAIFIGLFFAFLKISRIKVLEWIADIYIFLVRGTPLVVQIFI 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLSLFATR 206
            Y  + S+      ++VL                ++ +  K        LG+   L   R
Sbjct: 73  FYFGLTSLNISQFLAVVLGLAFHNGAYIAEIFRGSIQSIEKGQMEAGRSLGMSAGLAMRR 132

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           +     +   +ALP L     +     +L      Y+L 
Sbjct: 133 I--ILPQAVRRALPPLGNQFIIALKDSSLASFIGMYELF 169


>gi|311070992|ref|YP_003975915.1| putative ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310871509|gb|ADP34984.1| putative ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 225

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 14/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F + L      +    +     I   S   G +L LF   L+R       +    
Sbjct: 5   QWEYIFNLKLAIESFPYVIKGIWYTLLISFVSMFAGTMLGLFI-SLARMSKFALLRWPAR 63

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS   + G+P LV++ + Y           F F           +  +  S  +AA+I
Sbjct: 64  LYISF--MRGVPILVILFILY-----------FGFPYIGIEFSAVTAALLGFSLNSAAYI 110

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI RS + +V +GQ EAA +LGL++ K  R V+LPQ++R  +PPL +  L+L+K SSLA
Sbjct: 111 AEINRSAISSVDKGQWEAAASLGLSYWKTMRGVILPQSVRVALPPLANVLLDLIKASSLA 170

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+     I  +    + + ++   IY ++    A F N L  K A
Sbjct: 171 AMITVPELLQHAKIIGGREFDYMTMYILTALIYWAICSFAAAFQNILEKKYA 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T  ++F  M   T++G  +   R+S   L+ W  R+Y+   R +P LV++F 
Sbjct: 21  YVIKGIWYTLLISFVSMFAGTMLGLFISLARMSKFALLRWPARLYISFMRGVPILVILFI 80

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           LY     +            G  LN
Sbjct: 81  LYFGFPYIGIEFSAVTAALLGFSLN 105


>gi|313895906|ref|ZP_07829460.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975331|gb|EFR40792.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 227

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 15/237 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                   M                  +IF  +  L + L  F   L R    +    L 
Sbjct: 6   AFFTPGDMMDKILDTAFLMLEGSTVTLEIFCVTLALSLPLGFFV-ALGRLSRSRILGRLI 64

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  +++ G P ++ +   Y           F          +  + ++A     AA+
Sbjct: 65  DFYI--WVMRGTPLMLQLLFVY-----------FALPMIGIKLSDLSAAFLAFVLNYAAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI R+G+ AVPRGQ EAA  LG+++  A R ++LPQ +R  +PP++++ +NL+K++SL
Sbjct: 112 FAEIFRAGIQAVPRGQYEAARVLGMSYPLALRRIILPQVLRITLPPVSNETINLVKDTSL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +   DL+ V  TI+ +    +  ++I    YL+++  +     +L A     ++
Sbjct: 172 VYILAMNDLLRVARTIVQREFD-MTPLVIAGAFYLAMTAALTWGFKKLEAHYGRYDR 227



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +  +  +G  V  GRLS ++++  +   Y+ V R  P ++ + F+
Sbjct: 24  MLEGSTVTLEIFCVTLALSLPLGFFVALGRLSRSRILGRLIDFYIWVMRGTPLMLQLLFV 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y ++  +               LN              A
Sbjct: 84  YFALPMIGIKLSDLSAAFLAFVLNYAAYFAEIFRAGIQA 122


>gi|239834093|ref|ZP_04682421.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822156|gb|EEQ93725.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 226

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +P  + L    L                      +     T L R F      ++   Y+
Sbjct: 1   MPDWLQLMAESLPTLLWAGLIFTIPLTLLSFAFGLTLGLLTALVRLFAPLWLSSIARFYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV + + +                       F +  I  +    A+ +EI
Sbjct: 61  WIF--RGTPLLVQLFVIFY-----------GLPSAGIYLDAFPAAVIGFTLSVGAYSSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ + AVP+GQ EAA ++G++ R+A    +LPQA R+ +PPL++ +++L+K++SLA A+
Sbjct: 108 IRAVISAVPKGQWEAAYSIGMSWRQALSRTILPQATRTAVPPLSNSFISLVKDTSLAAAI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +L      I+  T + + + +    IYL +S +++    RL  +    
Sbjct: 168 TVPELFQSAQRIVATTYEPLILYIEAALIYLVMSSVLSALQVRLERRFGRY 218


>gi|163853362|ref|YP_001641405.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium extorquens PA1]
 gi|240140778|ref|YP_002965258.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens AM1]
 gi|254563288|ref|YP_003070383.1| glutamate/aspartate ABC transporter permease [Methylobacterium
           extorquens DM4]
 gi|163664967|gb|ABY32334.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium extorquens PA1]
 gi|240010755|gb|ACS41981.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens AM1]
 gi|254270566|emb|CAX26569.1| glutamate/aspartate transport protein, ABC superfamily, permease
           component [Methylobacterium extorquens DM4]
          Length = 230

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 114/230 (49%), Gaps = 10/230 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---------TF 227
            F    +   A    + F  G+V +L  T L+       G  L LL +S          F
Sbjct: 1   MFGHFDLSVVANSLPYLFGEGMVFTLTLTALAASGGIVLGTGLALLRLSGVPGLTHAAKF 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVR 286
            +  + +L L+ + +  +F  P LG +     + +    F S  +  + + AA+ +EIVR
Sbjct: 61  YVELMRSLPLVLVIFWFYFLVPYLGAWAIGADTPIQVGAFASALVTFTLFEAAYFSEIVR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++P+GQ  AA ALG+++ +  RLV+LPQA R+++P L +Q + L +++SL   +  
Sbjct: 121 AGIQSIPKGQSAAARALGMSYAQVMRLVVLPQAFRNMVPLLLTQTIVLFQDTSLVYVLSL 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D +     +  + G+ +E+ L    +Y ++    +L + RL A+ A+  
Sbjct: 181 TDFLGAASKVAQRDGRLVEMYLFAALVYFAVCFAASLLVRRLQARTAIAR 230


>gi|325578843|ref|ZP_08148890.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325159667|gb|EGC71799.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 223

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 103/227 (45%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L+           + + S ++G++LS+  T L  + +    K   ++     L+ 
Sbjct: 1   MFYDYLTLIGHAALMTLGLAICSLIVGLLLSIIFTALEANKYVFIAKPASVV---IALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y        +      G       F     ALS   A++ ++ +R  + 
Sbjct: 58  GLPEILVVLLIYFGSTQVVEM----LTGEYIEFSAFGCGVFALSLIFASYASQTLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AIPKGQWESGAALGLSRPYTFIHLIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G I   T +      I   IYL ++++    + +L  +    E+
Sbjct: 174 RQAGYINTNTHEPFTWYGIAALIYLVITLISQAGIRKLELRFTRFER 220


>gi|191639795|ref|YP_001988961.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
 gi|190714097|emb|CAQ68103.1| Glutamine-binding protein / Glutamine transport system permease
           protein [Lactobacillus casei BL23]
          Length = 488

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +S    TM        F+ ++GI++ L           K  + +   +I  F   G
Sbjct: 283 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLG-----VLPNKFAQGVATTFIYIF--RG 335

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 336 LPLMVLALFIYN---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 385

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 386 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 445

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 446 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 487



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  L    +  AT++G LVG   +  NK    +   ++ +FR +P +V+ 
Sbjct: 283 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLGVLPNKFAQGVATTFIYIFRGLPLMVLA 342

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 343 LFIYNGVPSL 352


>gi|153802492|ref|ZP_01957078.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|124121962|gb|EAY40705.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
          Length = 220

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+LF   + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+   +   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  + P
Sbjct: 75  YYGLPQIFP 83


>gi|253582767|ref|ZP_04859987.1| amino acid ABC transporter permease [Fusobacterium varium ATCC
           27725]
 gi|251835343|gb|EES63884.1| amino acid ABC transporter permease [Fusobacterium varium ATCC
           27725]
          Length = 208

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 19/219 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT++      +FS  LGI+LSL     +            ++ + T++  G P
Sbjct: 7   FILKGMKLTVNLYVVTMLFSLPLGILLSLGRVSKNTTLSN-------IIQVYTWIFRGTP 59

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ +   Y   +  PV+       G T+SP F +  +       A+  EI R  ++ + 
Sbjct: 60  LLLQLFFVY---YGLPVV-------GITLSP-FAAASLTFVINYTAYFCEIFRGSILGID 108

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA  LG+ + +    +++PQA+ + +PPL+++ ++L+K++SL  A+G A+++   
Sbjct: 109 PGQYEAAKVLGMKYWQTMIRIIIPQALITALPPLSNEAISLIKDTSLVSAIGMAEILRNS 168

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++ +   +I    I   IYL LS ++ LF  ++  K+
Sbjct: 169 RELVTRDF-SITPFFICAVIYLGLSTIVVLFFKKMEKKV 206



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 38/89 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L    M+ +  +G L+  GR+S N  ++ I +VY  +FR  P L+ +FF+
Sbjct: 8   ILKGMKLTVNLYVVTMLFSLPLGILLSLGRVSKNTTLSNIIQVYTWIFRGTPLLLQLFFV 67

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           Y  +  V               +N     
Sbjct: 68  YYGLPVVGITLSPFAAASLTFVINYTAYF 96


>gi|260881811|ref|ZP_05405274.2| L-cystine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
 gi|260847944|gb|EEX67951.1| L-cystine ABC transporter, permease protein [Mitsuokella multacida
           DSM 20544]
          Length = 239

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 94/221 (42%), Gaps = 3/221 (1%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           F    +     + + S   G VL L +  L++         L  LY+          L+ 
Sbjct: 18  FIAPYVKVTLLLTLSSVFFGAVLGLVSC-LAQRSQVPALGKLFRLYVYVCRSIPNMVLLY 76

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           + + Y +      L     I       P      I L+ +T A+++EI R+ L +VP+GQ
Sbjct: 77  L-VYYGMPLAFLALRGKTGIHVPIEHVPAMAVAIIGLTLHTGAYLSEIFRAALDSVPQGQ 135

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA A+G+T  +  R V+ PQA+   +P   +Q+L+ +K++S+   +   ++       
Sbjct: 136 FEAAEAMGMTSFQMYRRVIFPQAIVFALPLFANQFLSTMKSTSIVFVITVIEVFGAAKLF 195

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                Q  E  ++   +Y  + I+      +L  +++  ++
Sbjct: 196 CEDNSQYFEAYIVAALLYWGMGILFEYLFTKLEDRLSSYKR 236


>gi|224827115|ref|ZP_03700211.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224600624|gb|EEG06811.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 229

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 104/233 (44%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L    LT++  A   V S VLG++ ++F    SR              + 
Sbjct: 1   MFLQGYLPSILEGAALTLEVAAASLVVSVVLGLIGAMFKMAHSRALVWSA-------ELY 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           + ++ G+P LV + L +             F  G+      ++  + +     A++ E  
Sbjct: 54  STVVRGVPDLVWMFLLFFGGQMLINDVAERFGLGAPEINPMIAGVLTIGFIFGAYMTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  +++VP+GQMEA  A G++  +    +  PQ +R  +P  ++ +L L+K+++L   +G
Sbjct: 114 RGAIMSVPKGQMEAGAAYGMSPLRVFFRITAPQMVRFALPSFSNNWLVLVKSTALVSVIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D++    T  + T +   + ++   IYL ++ +  + +N +N + +   ++
Sbjct: 174 LNDMMYKADTAKSITQEPFTVYMVVAAIYLLITTVSIVALNAMNKRYSTGVRE 226



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G   T  +A + ++ + ++G +    +++ ++ + W   +Y  V R +P LV 
Sbjct: 6   YLPSILEGAALTLEVAAASLVVSVVLGLIGAMFKMAHSRALVWSAELYSTVVRGVPDLVW 65

Query: 145 IFFLYKSV 152
           +F L+   
Sbjct: 66  MFLLFFGG 73


>gi|66047102|ref|YP_236943.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|289676779|ref|ZP_06497669.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
 gi|302188857|ref|ZP_07265530.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|63257809|gb|AAY38905.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330898593|gb|EGH30012.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330949982|gb|EGH50242.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 242

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 3/237 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L    F                 K+ V S  L I+L L     ++       +    
Sbjct: 6   MQNLGLSAFSLKGFGPLLLEGTWMTVKLAVLSLALSILLGLIGAS-AKLSSSALLRVPAQ 64

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y  T LI G+P LVL+ L +        +              F +  I L     A+ 
Sbjct: 65  IY--TTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYF 122

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++L 
Sbjct: 123 TETFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALV 182

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G ADLV         T Q    +++   IYL ++      +       A   ++
Sbjct: 183 SIIGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITSASNFALRWAERYYAAGSRE 239



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 42/83 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   +  + ++G +  + +LS++ L+    ++Y  + R +P LV+
Sbjct: 19  FGPLLLEGTWMTVKLAVLSLALSILLGLIGASAKLSSSALLRVPAQIYTTLIRGVPDLVL 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +  ++ S+ + L +   ++   +
Sbjct: 79  MLLIFYSLQTWLTMLTDAMEWEY 101


>gi|150018983|ref|YP_001311237.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149905448|gb|ABR36281.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 242

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 106/226 (46%), Gaps = 18/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            +  +       T  ++ +   +L ++L +    LS     K  K +  +Y+   +I   
Sbjct: 14  FKDFNIFLEGFLTTLEVSILGLILALMLGIIFGVLS-TSKIKIFKVINRIYVE--VIQNT 70

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ +   +      P +          V P F+   + +  Y  A+I+E+VR+G+ ++
Sbjct: 71  PLVIQVFFLFN---GLPYIK--------VVLPVFLIGILGVGVYHGAYISEVVRTGITSI 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA + G +H +  R ++LPQ ++ IIPPL +Q +NL+KN+S+   +   DL+  
Sbjct: 120 PKGQFEAAKSQGFSHTQTMRYIILPQTVKIIIPPLANQLVNLIKNTSVLAMIAGGDLMYT 179

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  +         +I   +Y  +   +A+   +L     L+EKK
Sbjct: 180 ADSWSSANMYYGPAYVITGALYFIMCYPLAMISRKLE----LREKK 221



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 45/85 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF+ T  ++  G+I A ++G + G    S  K+   I R+YVEV +N P ++ +FFL
Sbjct: 20  FLEGFLTTLEVSILGLILALMLGIIFGVLSTSKIKIFKVINRIYVEVIQNTPLVIQVFFL 79

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  +  +  +    ++   G+ + +
Sbjct: 80  FNGLPYIKVVLPVFLIGILGVGVYH 104


>gi|229194739|ref|ZP_04321530.1| Amino acid ABC transproter, permease [Bacillus cereus m1293]
 gi|228588750|gb|EEK46777.1| Amino acid ABC transproter, permease [Bacillus cereus m1293]
          Length = 233

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 44  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 89

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  +PPL 
Sbjct: 90  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSLPPLG 149

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG A+L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 150 NQFIIGLKDSSLVAYVGMAELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 209

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 210 EKRLQRKE 217


>gi|283784629|ref|YP_003364494.1| arginine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282948083|emb|CBG87648.1| arginine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 238

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + +LG+ L++               +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALILGLALAMLFAVWESVKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L+    + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLLLSDGFTINLGVVQIPVQMTIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     +I   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFNWYIIAAAIYLVITLISQYILRRIDLRATRFERR 236


>gi|209518796|ref|ZP_03267610.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209500766|gb|EEA00808.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 226

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 13/187 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F  +   A+   Y+  +LI G P LV + + +                   V     
Sbjct: 44  VRLFGPRWAVAVVRFYV--WLIRGSPLLVQLFVIFY-----------GLPNVGIVLDPLT 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E++R  + ++P+GQ EAA ++G+T  +A R V+LPQA R  +PPL
Sbjct: 91  AATIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTRAEALRRVILPQAARVALPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA  +   ++      I + T + + +      +YL  S +++    R
Sbjct: 151 SNSFISLVKDTSLAAVLTVPEVFQAAQRIASVTYEPLILYTQAALVYLLFSSVLSSVQVR 210

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 211 LEQRFGR 217


>gi|259046648|ref|ZP_05737049.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
 gi|259036813|gb|EEW38068.1| polar amino acid uptake (PAAT) family ABC superfamily ATP binding
           cassette transporter, permease protein [Granulicatella
           adiacens ATCC 49175]
          Length = 219

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 18/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              LS    T+      FVF  +LG +L L      R    +  + +   ++S   + G 
Sbjct: 16  WFILSGLGYTLGVALTSFVFGTILGFILVLM-----RRSRFRFLRWIATFHVSF--MRGT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           PTLV + L   L+F  P L            P  +   +  S  ++A+I+E++RS + AV
Sbjct: 69  PTLVFLFL---LYFGLPFLK--------ITLPALVCALLCFSIASSAYISEVLRSAMDAV 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA++LG+++R+  + V++PQA R  IPPL++  L+++K SSL   +   D+   
Sbjct: 118 DNGQWEAAMSLGMSYRQTLQKVIVPQAFRIAIPPLSNVLLDMIKGSSLVAMISLPDIFQN 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +  +    + + ++   IY  + ++       L  K+AL
Sbjct: 178 AKIVGGREQNYMTVYILVAIIYWIICLLFEQGQRYLENKMAL 219



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL G   T  +A +  +  TI+G ++   R S  + + WI   +V   R  P LV +
Sbjct: 15  FWFILSGLGYTLGVALTSFVFGTILGFILVLMRRSRFRFLRWIATFHVSFMRGTPTLVFL 74

Query: 146 FFLYKSVL 153
           F LY  + 
Sbjct: 75  FLLYFGLP 82


>gi|163734792|ref|ZP_02142230.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
 gi|161391897|gb|EDQ16228.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
          Length = 239

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 3/233 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                + +    + LS+          + + ++ + IV+ +    + +    +  +A+  
Sbjct: 2   DYNWNWAVLFEEQYLSWLISGFGWTVSVALSAWCIAIVIGVLVG-VGKTVPNRFIRAICA 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F    +P LV + + Y    +        ++     +PEF++  +AL  YTA+ I
Sbjct: 61  TYVELF--RNVPLLVQMFIWYFAVPEMVPDDWGRWMKRDMPNPEFVTAVVALGLYTASRI 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VR+G+  VP G   AA A GL   +  R VLLP + R I+PPLTS++L + KNSSLA
Sbjct: 119 AEQVRAGIETVPPGLTAAATAHGLNVSQTYRYVLLPISFRMIVPPLTSEFLTVFKNSSLA 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +G  +L +    I   T Q  E       IY+ ++++  + M  L     +
Sbjct: 179 LTIGLLELTAQSQQIAEYTFQGFEAFTAATVIYVCIALIATILMQILEKYTRI 231



 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 45/86 (52%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y + ++ GF  T  +A S    A +IG LVG G+   N+ +  IC  YVE+FRN+P 
Sbjct: 12  EEQYLSWLISGFGWTVSVALSAWCIAIVIGVLVGVGKTVPNRFIRAICATYVELFRNVPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y +V  ++P      +   
Sbjct: 72  LVQMFIWYFAVPEMVPDDWGRWMKRD 97


>gi|15894165|ref|NP_347514.1| amino acid ABC transporter permease [Clostridium acetobutylicum
           ATCC 824]
 gi|15023774|gb|AAK78854.1|AE007603_5 Amino acid ABC transporter permease component [Clostridium
           acetobutylicum ATCC 824]
 gi|325508293|gb|ADZ19929.1| Amino acid ABC transporter permease component [Clostridium
           acetobutylicum EA 2018]
          Length = 221

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 11/230 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +             +     + V S ++G+V++       +    K    +  +YI
Sbjct: 1   MNFSVGYFLNSFPDLLKYIHYTIFMAVISTIIGLVIATIL-APIKMLKIKGLSQVIGVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV + + Y   +  P L     I          ++ + LS   +A++AEI
Sbjct: 60  SFF--RGTPLLVQLFVFY---YGLPQL-----IKPLKNVTPLEAMILGLSLCGSAYMAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  + +V +GQMEAA+++G+T  +A   ++ PQA+R  IP + +Q+++LLK+SSLA  +
Sbjct: 110 IRGAIESVEKGQMEAALSVGMTKFQAFTRIIYPQAIRVAIPGIGNQFVDLLKSSSLAFVL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  ++++        + + +E  L    IY     +       +  +I+ 
Sbjct: 170 GLTEILARAQMNAASSFKVMESYLSLAIIYWVTVEIFNFLQRIIEKRISR 219


>gi|325498848|gb|EGC96707.1| amino-acid transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ECD227]
          Length = 347

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|322513522|ref|ZP_08066623.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
 gi|322120675|gb|EFX92566.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Actinobacillus ureae ATCC 25976]
          Length = 222

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S V+G++LS+    L         K      +   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALASLVVGLLLSMLFVVLETSKQSCISKPTS---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   AA+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELLEK----ITGEYIEFSAFNCGVLALSLIFAAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLKIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + + RL  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIARLEKRFTRFER 220


>gi|283796751|ref|ZP_06345904.1| L-cystine ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|291075637|gb|EFE13001.1| L-cystine ABC transporter, permease protein [Clostridium sp. M62/1]
 gi|295092596|emb|CBK78703.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
          Length = 221

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 15/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F + +     +    T+   A  FV S +L +V++         F     + +  +
Sbjct: 1   MDWEFSVSVLRSMFAALPTTLSLAAVSFVLSLLLAVVIAGIDY-----FKVPVLRQVCAV 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G P +  + L   L+F  P      FI      P F    + L+  +AA++ 
Sbjct: 56  YVSFF--RGTPLIPQLFL---LYFGIPT-----FIPELRDIPAFAVCIVGLTLNSAAYMK 105

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR  L++VP GQ EAA+A G+T  +A   ++ PQA+R  IP L +  ++++K +S+A 
Sbjct: 106 EAVRGALLSVPAGQREAALAHGMTPLQAMAHIVFPQAVRVAIPSLFNNLVDIVKGTSMAF 165

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +G  ++ +      + T +  E  ++ M +Y  + +++      L  K +
Sbjct: 166 TIGVIEITAAANLRASVTFRYFEAYMLLMLLYWVIILVLERAEALLEKKFS 216



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 33/82 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +    S   ++      T  LA    + + ++  ++         ++  +C VYV  F
Sbjct: 1   MDWEFSVSVLRSMFAALPTTLSLAAVSFVLSLLLAVVIAGIDYFKVPVLRQVCAVYVSFF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPI 158
           R  P +  +F LY  + + +P 
Sbjct: 61  RGTPLIPQLFLLYFGIPTFIPE 82


>gi|225163909|ref|ZP_03726201.1| polar amino acid ABC transporter, inner membrane subunit
           [Opitutaceae bacterium TAV2]
 gi|224801486|gb|EEG19790.1| polar amino acid ABC transporter, inner membrane subunit
           [Opitutaceae bacterium TAV2]
          Length = 216

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 103/232 (44%), Gaps = 16/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L   T+T+       + S     V       L R             YI
Sbjct: 1   MEYVISILKPLLEGSTVTLKLFFITLILS-----VPLGLLLALLRISRFPAVSLAVNGYI 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +L+ G P ++ +   Y      PV+            P+F +  +A +   AA+ AEI
Sbjct: 56  --WLMRGTPLMLQMLFIYFALPFVPVI--------GIRLPDFPAAVVAFALNYAAYFAEI 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQ E A  LG ++ +  R ++LPQ ++ I+PP++++ + L+K++SL   +
Sbjct: 106 FRAGIQSIDKGQYEGARVLGFSYPQTMRRIVLPQMVKRILPPMSNETITLVKDTSLIYVL 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              DL+     I+ +        ++    YL +++++     RL  + A+ +
Sbjct: 166 ALNDLLRAARGIVQRDF-TTSPFIVAAAFYLLMTLVLTWGFQRLEKRHAVYD 216


>gi|115360207|ref|YP_777345.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115285495|gb|ABI91011.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 229

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +  KAL   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVETVKLAVLSLAASLVLGLVGAS-AKLSTNRALKALGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +        +              F++  I L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNMATDALGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 188 TLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 226


>gi|320325613|gb|EFW81675.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
          Length = 248

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/223 (29%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRL-----VSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+  
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEV 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 70.4 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A    I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVVAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|319441562|ref|ZP_07990718.1| glutamate ABC transport system, permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 313

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 15/256 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++   L+          D   +   G       +     T+       + + ++G VL +
Sbjct: 34  LLASVLWALGNKGQLDGDKWNIFTKGSSWTTYIIPGLWATVKAAVLSIILALIVGAVLGI 93

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    ++ + +  + +  F    +P LVL+   Y + F +  L     +G    
Sbjct: 94  -----GRLSTHRSIRWICSIIVEVF--RSIPVLVLMLFAYTI-FGEWGLFPSTQLG---- 141

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F ++   L+ Y  + IAE +RSG+ ++P+GQ EAA ALGL+  +  R +LLPQA+ +
Sbjct: 142 ---FAAVVFGLTMYNGSVIAETLRSGIESLPKGQSEAAYALGLSWGQTMRKILLPQAVAA 198

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P + SQ +  LK+S+L   +GF ++V  G  +    G  +  +L+   I + ++  + 
Sbjct: 199 MMPAIVSQMVIALKDSALGYMIGFVEVVRSGRQLGEYYGSILPSLLVVAAIMIIINFGLT 258

Query: 383 LFMNRLNAKIALKEKK 398
               R+  ++     +
Sbjct: 259 RLAERIERQLRAGRAR 274



 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 22/161 (13%)

Query: 15  RMKFLYD---MR--VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD    R    N  + +I++L L  +    +                  L  +  
Sbjct: 4   RATVLYDAPGPRAVRINRILTVIVSLALIALLASVLWA----------------LGNKGQ 47

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
            + D+  + +T  SS+ T I+ G   T   A   +I A I+G ++G GRLS ++ + WIC
Sbjct: 48  LDGDKWNI-FTKGSSWTTYIIPGLWATVKAAVLSIILALIVGAVLGIGRLSTHRSIRWIC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            + VEVFR+IP LV++ F Y         P   +     +F
Sbjct: 107 SIIVEVFRSIPVLVLMLFAYTIFGEWGLFPSTQLGFAAVVF 147


>gi|289624941|ref|ZP_06457895.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289650482|ref|ZP_06481825.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|330867231|gb|EGH01940.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 248

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +  T  SR         +  +Y+  F    +P
Sbjct: 24  WFISGLGWTIAIAVAAWIIALILGSVLGVMRTVPSRL-----VSGIATVYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLLMRMIEKKVAV 239



 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 43/86 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A +  I A I+G+++G  R   ++LV+ I  VYVE+FRN+P 
Sbjct: 18  SETYLDWFISGLGWTIAIAVAAWIIALILGSVLGVMRTVPSRLVSGIATVYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPENLQEWYKQD 103


>gi|262402084|ref|ZP_06078648.1| amino acid ABC transproter permease protein [Vibrio sp. RC586]
 gi|262351730|gb|EEZ00862.1| amino acid ABC transproter permease protein [Vibrio sp. RC586]
          Length = 223

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+L    + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALILANI-RVFKVPVLDPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTLEMASWGLVFALILALILANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  V P
Sbjct: 75  YYGLPQVFP 83


>gi|116496267|ref|YP_808001.1| amino acid ABC transporter periplasmic protein [Lactobacillus casei
           ATCC 334]
 gi|116106417|gb|ABJ71559.1| amino acid ABC transporter substrate-binding protein, PAAT family /
           amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
          Length = 484

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +S    TM        F+ ++GI++ L           K  + +   +I  F   G
Sbjct: 279 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLG-----VLPNKFAQGVATTFIYIF--RG 331

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 332 LPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 381

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 382 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 441

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 442 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 483



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  L    +  AT++G LVG   +  NK    +   ++ +FR +P +V+ 
Sbjct: 279 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLGVLPNKFAQGVATTFIYIFRGLPLMVLA 338

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 339 LFIYTGVPSL 348


>gi|300937397|ref|ZP_07152232.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300979703|ref|ZP_07174653.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300307921|gb|EFJ62441.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300457571|gb|EFK21064.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|324015880|gb|EGB85099.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
          Length = 347

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|283852207|ref|ZP_06369480.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283572433|gb|EFC20420.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 230

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 9/228 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F  F   R +      + T   + V + +LG+ + + A   +R +  +    + +L    
Sbjct: 4   FFEFAATRIIPALDAGLWTTILLIVPASLLGMAIGVTAGT-ARVYGPRPL--IRVLDWYV 60

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +  G P +V +   Y        L          V P   +  I  +  + A+ +E +R
Sbjct: 61  AVFRGTPLVVQLYFWYF------ALPNVAVGDVRLVLPPMWAAIIGFALCSGAYQSEYIR 114

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL+++ RGQ+ AA ALG+T       V+LPQA R  +P   ++ + L+K SSLA  +  
Sbjct: 115 GGLLSIKRGQLRAAQALGMTPLTTVTSVVLPQAFRRALPGCGNEIIYLIKYSSLASIITV 174

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            DL  +G ++   + +  E+ ++    YL+L  +    +  +  K+ +
Sbjct: 175 NDLTGMGRSLAKSSFRNTEVFVVVGLYYLALVTVATFVLRAVEKKLEI 222



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G   T  L     +    IG   G  R+   + +  +   YV VFR  P +V ++F
Sbjct: 15  ALDAGLWTTILLIVPASLLGMAIGVTAGTARVYGPRPLIRVLDWYVAVFRGTPLVVQLYF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
            Y ++ +V       ++ P    +    L       +      +
Sbjct: 75  WYFALPNVAVGDVRLVLPPMWAAIIGFALCSGAYQSEYIRGGLL 118


>gi|77457436|ref|YP_346941.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77381439|gb|ABA72952.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 242

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 2/191 (1%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    K  +    LY  T LI G+P LVL+ L +                       F 
Sbjct: 51  AKLSKIKLLRLPAQLY--TTLIRGVPDLVLMLLIFYSLQTWLTTLTDYLEWEYIEIDPFS 108

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L     A+  E  R  ++AVPRGQ+EAA A GL   +  R V+ PQ MR  +P +
Sbjct: 109 AGVLTLGFIYGAYFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGI 168

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + ++ +LK ++L   +G ADLV         T Q    +++   IYL ++      +  
Sbjct: 169 GNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFILRW 228

Query: 388 LNAKIALKEKK 398
           L  + A   ++
Sbjct: 229 LERRYAAGARE 239


>gi|104773642|ref|YP_618622.1| glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422723|emb|CAI97350.1| Glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 213

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/201 (33%), Positives = 100/201 (49%), Gaps = 2/201 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLL--YISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +F+LG   ++  + +S  F    G    +L    S F        V I L   L     V
Sbjct: 11  TFLLGFWNTILCSLISLFFSLIVGSGFAILETVPSKFWRVVAKVYVEIFLNIPLLVVTMV 70

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                          F +  I LS Y++AFIAE VRSG+ +V  GQME A + G+T+ +A
Sbjct: 71  FYLVLPTYTPLKLTGFQAGTIGLSIYSSAFIAETVRSGIQSVGTGQMEGARSNGMTYWQA 130

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA R +IP L +Q++NL+KNSS+   V   DL+  G  + + T Q I   ++ 
Sbjct: 131 MRYVILPQAFRIVIPSLGNQFVNLIKNSSILAFVAGFDLMYQGDIVASNTFQTIPSYVLV 190

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
              YL L++ ++ +M  L  K
Sbjct: 191 SLFYLVLTLPLSYYMQYLEKK 211



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            +  L+GF NT   +   +  + I+G+         +K    + +VYVE+F NIP LVV 
Sbjct: 9   WSTFLLGFWNTILCSLISLFFSLIVGSGFAILETVPSKFWRVVAKVYVEIFLNIPLLVVT 68

Query: 146 FFLYKSVLSVLP 157
              Y  + +  P
Sbjct: 69  MVFYLVLPTYTP 80


>gi|21910934|ref|NP_665202.1| putative amino acid ABC transporter permease [Streptococcus
           pyogenes MGAS315]
 gi|28895376|ref|NP_801726.1| amino acid ABC transproter (permease protein) [Streptococcus
           pyogenes SSI-1]
 gi|21905141|gb|AAM80005.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28810622|dbj|BAC63559.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes SSI-1]
          Length = 267

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+        F  VL +
Sbjct: 2   TSVFLTSGWAFYDHLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLSGATFGLVLAL 61

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + +L      +  +       P+  I    + G P LV + L Y     F K +  ++ F
Sbjct: 62  IFALVKINKVKLLY-------PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKCLNQKYGF 114

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 115 DWNVNAIPASIFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 174

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  ++ +    +     +  E  +    +Y S
Sbjct: 175 PNATVVAIPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWS 234

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI++      +  K+A+K
Sbjct: 235 ISILMEQIGRLIENKMAIK 253


>gi|324994093|gb|EGC26007.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
          Length = 286

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 16/268 (5%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV   +   ++    Y+  L  +P       L          L    +T+   A   VF 
Sbjct: 15  EVIIVVTTYLLTTGWYEEFLKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFG 73

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251
            +L +V ++      +  +       P+       + G P LV + L Y   F  P+L  
Sbjct: 74  ILLAMVFAIVKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLK 123

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               ++         P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T++
Sbjct: 124 AINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNK 183

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++P A     P L +  + L K +SLA + G  ++ +    I     +  E  +
Sbjct: 184 QVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFI 243

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               IY +++I+I      +   + +K+
Sbjct: 244 SVSLIYWAVNILIEQLGRWIEKMMDIKQ 271


>gi|229541937|ref|ZP_04430997.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229326357|gb|EEN92032.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 217

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 10/201 (4%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G+V S     L   F     K   L +I    +  +  + LI   +  +         
Sbjct: 26  IIGLVASFILGNLIAVFRLAPVKL--LNFIGAVYVEVIRNIPLILTGFFFYNGLSYFH-- 81

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                      F++  IALS YTAAFIAE VR+G+ +V +GQ+EAA + GLT+ +A R V
Sbjct: 82  ------INLSGFIAGTIALSIYTAAFIAEAVRAGIQSVDKGQLEAARSTGLTYTQAMRYV 135

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA++ +IPP+ +Q+LNL+KNSS+       DL+     I  +T    +  +     Y
Sbjct: 136 VLPQAIKIVIPPIGNQFLNLVKNSSILGVFAGLDLMYYADLIHEKTWITFDTYIFVGMFY 195

Query: 375 LSLSIMIALFMNRLNAKIALK 395
           L L+I ++L +N L  ++A  
Sbjct: 196 LILTIPLSLLVNYLERRLARS 216



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/70 (37%), Positives = 40/70 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GFVNT  ++  G++ + I+G L+   RL+  KL+ +I  VYVEV RNIP ++  FF 
Sbjct: 14  YMKGFVNTIKISIIGLVASFILGNLIAVFRLAPVKLLNFIGAVYVEVIRNIPLILTGFFF 73

Query: 149 YKSVLSVLPI 158
           Y  +      
Sbjct: 74  YNGLSYFHIN 83


>gi|306826917|ref|ZP_07460217.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|304430935|gb|EFM33944.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 267

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+        F  VL +
Sbjct: 2   TSVFLTSGWAFYDHLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLSGATFGLVLAL 61

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + +L      +  +       P+  I    + G P LV + L Y     F K +  ++ F
Sbjct: 62  IFALVKINKVKLLY-------PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKCLNQKYGF 114

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 115 DWNVNAIPASIFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 174

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  ++ +    +     +  E  +    +Y S
Sbjct: 175 PNATVVAIPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWS 234

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI++      +  K+A+K
Sbjct: 235 ISILMEQVGRLIENKMAIK 253


>gi|323127864|gb|ADX25161.1| Amino acid ABC transporter permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 267

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 102/259 (39%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+       VF  +L +
Sbjct: 2   TSVFLTSGWAWYDQLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLAGAVFGLILAL 61

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + ++      +  +       P+  +    + G P LV + L Y     F K +  ++ F
Sbjct: 62  IFAIVKINKVKILY-------PIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 114

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 115 DWNINAIPASVFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 174

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  ++ +    +     +  E  +    +Y S
Sbjct: 175 PNAAVVAIPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWS 234

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI+I      +  ++A+K
Sbjct: 235 ISILIEQVGRLIENRMAIK 253


>gi|15835024|ref|NP_296783.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           Nigg]
 gi|270285190|ref|ZP_06194584.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           Nigg]
 gi|270289209|ref|ZP_06195511.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           Weiss]
 gi|301336586|ref|ZP_07224788.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           MopnTet14]
 gi|7190447|gb|AAF39262.1| amino acid ABC transporter, permease protein [Chlamydia muridarum
           Nigg]
          Length = 214

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 13/205 (6%)

Query: 187 AKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             I   S V G VL     T  SR+F  +  K L   Y+    + G P  + I + Y   
Sbjct: 19  LFITAISLVCGFVLGWGIGTVNSRYFPCRIAKFLGNFYVMA--VRGTPLFIQILIVY--- 73

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P L + N           ++  IAL+  +AA+++E VR G+ A+P  Q EAA  LG 
Sbjct: 74  FGLPSLIKVNL-------SPLVAGLIALTFNSAAYLSENVRGGINAIPIQQWEAAKVLGY 126

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +    +L PQ  ++I+P LT+++++L+K SS+ + VG  +L  V   I+ +    +E
Sbjct: 127 KASQIFWHILYPQVFKNILPSLTNEFVSLIKESSILMVVGVPELTKVTKDIVARELNPME 186

Query: 366 IILIWMFIYLSLSIMIALFMNRLNA 390
           + LI   +YL ++   + F      
Sbjct: 187 MYLICAGLYLVMTSAFSYFARLSEK 211


>gi|254229977|ref|ZP_04923378.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. Ex25]
 gi|262392807|ref|YP_003284661.1| putative amino acid ABC transporter permease [Vibrio sp. Ex25]
 gi|151937479|gb|EDN56336.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. Ex25]
 gi|262336401|gb|ACY50196.1| putative amino acid ABC transporter permease protein [Vibrio sp.
           Ex25]
          Length = 246

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 17/239 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
                       G+      ++  + T+  +    +F+  LG++++L    LS   + K 
Sbjct: 22  WGWYVLDPSTEQGLTNLKFLIAGFSDTIQVSLLSMLFAMTLGLIIAL--PALSNSPYLK- 78

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
                  +I+   +  + ++ ++ L   +++  P L   +          F +  IAL+ 
Sbjct: 79  -------WINRIYVEVVRSVPVLVLLLWVYYGMPTLLDVSL-------NHFWAGVIALTI 124

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +AF+AE+ R G+ A+ RGQ EAA +LGL++ +   LV+LPQA R I+PPL +Q++ +L
Sbjct: 125 AESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMHLVILPQAFRQILPPLGNQFVYIL 184

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           K SSL   +G +DL      ++      +EI    +  YL L + ++  +  L  +IA+
Sbjct: 185 KMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILFVSQAVRWLEKRIAI 243



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           +    ++ GF +T  ++   M+ A  +G ++    LS +  + WI R+YVEV R
Sbjct: 36  TNLKFLIAGFSDTIQVSLLSMLFAMTLGLIIALPALSNSPYLKWINRIYVEVVR 89


>gi|90962414|ref|YP_536330.1| glutamine transport system permease protein [Lactobacillus
           salivarius UCC118]
 gi|90821608|gb|ABE00247.1| Glutamine transport system permease protein [Lactobacillus
           salivarius UCC118]
          Length = 217

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    V SF++G++L +      ++     G          FLI  +  L
Sbjct: 17  LEGLWVTLEVSVISIVLSFIIGLILGVIRYVKIKYLSAAVG----------FLIDIIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P L               ++   AL  + +A +AEIVRSG+ AVP G
Sbjct: 67  PLLLIIFFTYFGLPEL--------GLRMTPMLAAVTALVVFESAMLAEIVRSGIQAVPVG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + GLT+ +A   +++PQA++ +IPPL SQ+++L+K++SLA  +   +L+     
Sbjct: 119 QMEGARSSGLTYVQAMWHIIMPQALQKMIPPLVSQFISLVKDTSLATIIVLPELLYHAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I +Q T   + + L+   +Y  +   ++L   RL  +  
Sbjct: 179 IYSQNTTYMVPMYLMIAVMYFIVCYCLSLVARRLEKRYG 217



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   ++ + IIG ++G  R    K ++      +++ RN+P 
Sbjct: 9   SWINLRFLLEGLWVTLEVSVISIVLSFIIGLILGVIRYVKIKYLSAAVGFLIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y  +  +
Sbjct: 69  LLIIFFTYFGLPEL 82


>gi|310639893|ref|YP_003944651.1| glutamine abc transporter permease protein [Paenibacillus polymyxa
           SC2]
 gi|309244843|gb|ADO54410.1| Glutamine ABC transporter permease protein [Paenibacillus polymyxa
           SC2]
          Length = 219

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 18/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + SF+LG ++++F     R    K    +  +Y+       L  +VL       + 
Sbjct: 28  VIALIGSFILGAIIAIF-----RIAPFKWLNWIGTVYVEVIRNIPLLIVVLFF-----YL 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L              F+S  + L+ YTA+FIAE +R+G+ +VP+GQ EA+ + GL 
Sbjct: 78  GLPTL--------GIPLDGFVSGTLGLTVYTASFIAEAIRAGIQSVPKGQFEASRSSGLN 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    ++LPQA++ ++P + +Q++NL+KNSS+   V   DL+     I + T   I +
Sbjct: 130 YNQTMISIILPQAIKIVLPAIGNQFINLVKNSSVLAIVAGLDLMYYSDLINSDTFLPITV 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I   +YL L++ ++  +  +  +++
Sbjct: 190 YAITALLYLVLTVPLSFLVLYMERRLS 216



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +      G ++T   +   +I + I+G ++   R++  K + WI  VYVEV RNIP L+V
Sbjct: 12  HGDRFREGLLHTVQASVIALIGSFILGAIIAIFRIAPFKWLNWIGTVYVEVIRNIPLLIV 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           + F Y  + ++    D  +    G+ +     
Sbjct: 72  VLFFYLGLPTLGIPLDGFVSGTLGLTVYTASF 103


>gi|294498828|ref|YP_003562528.1| sulfur-containing amino acid ABC transporter permease TcyL
           [Bacillus megaterium QM B1551]
 gi|294348765|gb|ADE69094.1| sulfur-containing amino acid ABC transporter, permease protein TcyL
           [Bacillus megaterium QM B1551]
          Length = 232

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 7/231 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + L    +      +     I + S V+G  L LF   L R +       +  +YIS 
Sbjct: 5   FDIELIFTSIPQLLSYLHITIWILIASLVIGSTLGLFI-ALPRIYKVPVLSQIAAVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P L+ + L +   +  P L Q   I  S ++P  + + I  S  TAA  +E++R
Sbjct: 64  --MRGTPILIQLFLVF---YGIPALLQLIHIDVSRMAP-LVFVIITYSLSTAASFSEMMR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +V +GQ EAA ++G+T ++    ++LPQA+    P   +  +  LK++SLA  +G 
Sbjct: 118 GAINSVDKGQTEAAYSIGMTGKQTFTRIVLPQALVVAFPNFGNLVIGSLKDTSLAFTIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++  G TII  T  A+E+ +    IY  ++I++  F  +   K+   ++
Sbjct: 178 MDMMGRGDTIIAATAHAVEVYIALAIIYYFVAIILEKFFVKSEQKLQKHDQ 228



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T W+  + ++  + +G  +   R+    +++ I  VY+   R  P L+ +F +
Sbjct: 17  LLSYLHITIWILIASLVIGSTLGLFIALPRIYKVPVLSQIAAVYISFMRGTPILIQLFLV 76

Query: 149 YKSVL 153
           +  + 
Sbjct: 77  FYGIP 81


>gi|290473963|ref|YP_003466837.1| arginine ABC transporter membrane protein [Xenorhabdus bovienii
           SS-2004]
 gi|289173270|emb|CBJ80045.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus
           bovienii SS-2004]
          Length = 240

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 12/236 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLL 222
              L            + V S V+G++L++          +             + LP +
Sbjct: 1   MSELQSLINAAGITIGLAVSSLVIGLILAMLFAAWESAGWKPFAFLGSCWVTLIRGLPEI 60

Query: 223 YISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +  F+ FG   L++ ++  + ++           I    VSP F+   IALS   +A+ 
Sbjct: 61  LVVLFIYFGSSQLLITLSEGFDVNLIVWQFRIQMEIDNFDVSP-FLCGVIALSLLYSAYA 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP GQ EA  ALGL+  +    + +PQ  R  +P L +Q+L LLK+++L 
Sbjct: 120 SQTLRGALKAVPMGQREAGQALGLSQSRIFFRLTMPQMWRHALPGLGNQWLVLLKDTALV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   DL+    +I  +T +     +I   IYL ++++    + RL  +    E+
Sbjct: 180 SLISVNDLMLQTKSIATRTQEPFTWYVIAAMIYLVITLVSQFILKRLEMRAIHFER 235


>gi|313497021|gb|ADR58387.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 263

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 16/261 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+    L+   ++     D    +    F N  G           A + +F  +  +V+
Sbjct: 16  LLLTWLALFGLFVAFFLSFDLKFAIILEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVV 75

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           S+   FA  L+R  +      +   Y S F    L          Q+      L Q   +
Sbjct: 76  SVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLI--------QILLIYLGLPQVGLV 127

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G+       +  IALS    A+++EI R+G++ V RGQ EAA+ALG+   +    ++LP
Sbjct: 128 PGAI-----SAGIIALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIILP 182

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QAMR IIPP  +Q++++LK+SSL   +G  +++ +  +    + + +E++     IY  L
Sbjct: 183 QAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVL 242

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           SI++ L   RL        ++
Sbjct: 243 SILLELLQARLERHFGKAYQR 263



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L    M+ + ++G      RLS + ++  +   Y   FR  P L+ I  +
Sbjct: 58  FLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLIQILLI 117

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  V  +P         + LN 
Sbjct: 118 YLGLPQVGLVPGAISAGIIALSLNY 142


>gi|261753640|ref|ZP_05997349.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|261743393|gb|EEY31319.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
          Length = 250

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 105/255 (41%), Gaps = 13/255 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
              ++     +   +        ++P  + L    L                      + 
Sbjct: 1   MHFLLCMFIPARFIIPITAKEPKLVPDWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLA 60

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               T L R F      ++   Y+  F   G P LV + + +                  
Sbjct: 61  LGLLTALVRLFASVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIG 107

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  I+ +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA 
Sbjct: 108 IYLDAFPAALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQAT 167

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +PPL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +
Sbjct: 168 RTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSI 227

Query: 381 IALFMNRLNAKIALK 395
           ++    RL  +    
Sbjct: 228 LSALQVRLERRFGRY 242


>gi|313622696|gb|EFR93054.1| arginine transport system permease protein ArtQ [Listeria innocua
           FSL J1-023]
          Length = 165

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 11/169 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            + G P L+ I + +           F           F+S  IALS  +AA++AEI+R+
Sbjct: 8   FVRGTPLLIQIFIVF-----------FGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRA 56

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+P L ++++ ++K SS+   +G  
Sbjct: 57  GISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVT 116

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L+ + G +   + +    ++I   IY  L+  ++  +     ++   +
Sbjct: 117 ELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRLLGVAERRMRTSD 165


>gi|119383037|ref|YP_914093.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Paracoccus denitrificans PD1222]
 gi|119372804|gb|ABL68397.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 219

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   +    L+   +T+       + + VLG+V ++     +R     TG     
Sbjct: 2   EWDWDFAWSIMPTLLAGFRITLIATVLGAMVAAVLGLVFAILRRSPNRLVARTTG----- 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                  I G P LV +   + +  D                P   +  I +  + A + 
Sbjct: 57  --FVVEFIRGTPLLVQLYFIFYVLPDL-----------GIRLPALTAGVIGMGLHYATYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R G+ AVPRGQ EAA A  LT R+    V+LPQA+  +IP + +  L + K + L 
Sbjct: 104 AEVYRGGIEAVPRGQWEAAKATNLTTRQTWLHVVLPQAVPPMIPAMANYLLAMFKETPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            A+   +L++   ++ N + + +E + +   ++L +S++  + +  L  +     +
Sbjct: 164 SAITVLELMNQAKSVANSSYRYVEPMTLVGVMFLVVSLISVIGLRWLERRYGRISR 219



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    S    +L GF  T      G + A ++G +    R S N+LVA      VE  R
Sbjct: 4   DWDFAWSIMPTLLAGFRITLIATVLGAMVAAVLGLVFAILRRSPNRLVARTTGFVVEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             P LV ++F++  +  +            GM L+    +         A
Sbjct: 64  GTPLLVQLYFIFYVLPDLGIRLPALTAGVIGMGLHYATYAAEVYRGGIEA 113


>gi|229551205|ref|ZP_04439930.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|229315497|gb|EEN81470.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
          Length = 488

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  +     TM        F+ ++GI++             K  + +   +I  F   G
Sbjct: 283 WSTLMDGLRETMVLTIVAIFFATLVGILIGFLG-----VIPNKLCQGIATTFIYIF--RG 335

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 336 LPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 385

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 386 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 445

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 446 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 487



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            + ++ G   T  L    +  AT++G L+G   +  NKL   I   ++ +FR +P +V+ 
Sbjct: 283 WSTLMDGLRETMVLTIVAIFFATLVGILIGFLGVIPNKLCQGIATTFIYIFRGLPLMVLA 342

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 343 LFIYTGVPSL 352


>gi|186471432|ref|YP_001862750.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184197741|gb|ACC75704.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 215

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   S V G ++ L A  L R F       +  LY   F   G P L+ +   Y    
Sbjct: 21  LLLSAASIVGGTLIGLLAAVL-RSFGPWGSARVAKLYTELF--RGTPVLITLMFIY---- 73

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           F +  + LS Y  A+IAE+ RSG+ AVP+GQ E +  LGL 
Sbjct: 74  -------FGVSYFGYAIDVFAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVSQILGLG 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQ  + ++PPL  QYL+L+K++S+   +G ++L+  G  I+++ G+ +EI
Sbjct: 127 KMQTFFSVVLPQTGKIVLPPLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRVGKPVEI 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             +   +Y  +   ++ ++   + +
Sbjct: 187 YGLVAILYFVVCFPLSQWVRHHDRR 211



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L+ + ++  T+IG L    R       A + ++Y E+FR  P L+ + F+Y  
Sbjct: 16  GLVATLLLSAASIVGGTLIGLLAAVLRSFGPWGSARVAKLYTELFRGTPVLITLMFIYFG 75

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           V       D       G+ +               A
Sbjct: 76  VSYFGYAIDVFAAGVVGLSVYQGAYIAEVFRSGIEA 111


>gi|330973077|gb|EGH73143.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 254

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 2/159 (1%)

Query: 238 IALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + Y L  D     L ++     +  +  F+S+ + L  +TAA + E VR+G+ A+P+G
Sbjct: 1   MFIWYFLVPDLLPENLQEWYKQDLNPTTSAFLSVVVCLGLFTAARVCEQVRTGIEALPKG 60

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++    
Sbjct: 61  QESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 120

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 121 TAEFSANLFEAFTLATLIYFTLNMSLMLLMRVIEKKVAV 159


>gi|225686457|ref|YP_002734429.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
 gi|256043565|ref|ZP_05446492.1| cystine transport system permease protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|256111397|ref|ZP_05452423.1| cystine transport system permease protein [Brucella melitensis bv.
           3 str. Ether]
 gi|265999077|ref|ZP_05464935.2| cystine transport system permease [Brucella melitensis bv. 2 str.
           63/9]
 gi|225642562|gb|ACO02475.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
 gi|263092136|gb|EEZ16433.1| cystine transport system permease [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410835|gb|ADZ67899.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M28]
 gi|326554126|gb|ADZ88765.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M5-90]
          Length = 226

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +P  + L    L              +       +     T L R F      ++   Y+
Sbjct: 1   MPDWLQLMADSLPTLLWAGLIFTIPLILLSFTFGLALGLLTALVRLFAPVWLSSVARFYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P LV + + +                       F +  I  +    A+ +EI
Sbjct: 61  WIF--RGTPLLVQLFVIFY-----------GLPSIGVYLDAFPAALIGFTLNIGAYSSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL++ +++L+K++SLA A+
Sbjct: 108 IRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPLSNTFISLIKDTSLAAAI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +L      I+  T + + + +    IYL+LS +++    RL  +    
Sbjct: 168 TVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVRLERRFGRY 218


>gi|159904733|ref|YP_001548395.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C6]
 gi|159886226|gb|ABX01163.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C6]
          Length = 219

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            ++    + F    +    KI + SF+L +++++    +      KT   + ++Y+  F 
Sbjct: 3   FYIVYNNIPFIIDAVFVTLKITIMSFLLAVIIAVLVGSVRAMNFSKTLNLVLMVYVEVF- 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P L+ +   Y                   V     +  + LS    A+I+EI+R+ 
Sbjct: 62  -RGTPLLIQLFFIYY-----------GLPSVGIVMSSTFAAVLGLSLNGGAYISEIMRAA 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP GQ EAA +LG++  ++   ++LPQA R  +P L + +  LLK SSL   +   +
Sbjct: 110 IQSVPVGQFEAAESLGMSKIESMIYIVLPQAFRITVPSLVNSFSALLKESSLISVLAITE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L  +G  I  +T +  EI L    IYL L  +I++   ++  K+
Sbjct: 170 LTRIGQLIYTKTSRPFEIYLTIGLIYLVLVSIISISSWKIEKKL 213



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 1/85 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFF 147
           I+     T  +     + A II  LVG+ R     K +  +  VYVEVFR  P L+ +FF
Sbjct: 13  IIDAVFVTLKITIMSFLLAVIIAVLVGSVRAMNFSKTLNLVLMVYVEVFRGTPLLIQLFF 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  + SV  +   +     G+ LN
Sbjct: 73  IYYGLPSVGIVMSSTFAAVLGLSLN 97


>gi|308067188|ref|YP_003868793.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
 gi|305856467|gb|ADM68255.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
          Length = 219

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 18/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + SF+LG ++++      R    K    +  +Y+       L  +VL       + 
Sbjct: 28  VIALIGSFILGAIIAIL-----RIAPFKWLNWIGTVYVEVIRNIPLLIVVLFF-----YL 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L              F+S  + L+ YTA+FIAE +R+G+ AVP+GQ EAA + GL+
Sbjct: 78  GLPTL--------GIPLDGFVSGTLGLTVYTASFIAEAIRAGIQAVPKGQFEAARSSGLS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    ++LPQA++ ++P + +Q++NL+KNSS+   V   DL+     I + T   I +
Sbjct: 130 YNQTMINIILPQAIKVVLPAIGNQFINLVKNSSVLAIVAGLDLMYYSDLINSDTFLPITV 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I   +YL L++ ++  +  +  +++
Sbjct: 190 YAITALLYLILTVPLSFLVLYMERRLS 216



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 45/96 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G ++T   +   +I + I+G ++   R++  K + WI  VYVEV RNIP L+V+ F Y  
Sbjct: 19  GLLHTVQASVIALIGSFILGAIIAILRIAPFKWLNWIGTVYVEVIRNIPLLIVVLFFYLG 78

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + ++    D  +    G+ +         +     A
Sbjct: 79  LPTLGIPLDGFVSGTLGLTVYTASFIAEAIRAGIQA 114


>gi|297521618|ref|ZP_06940004.1| predicted amino-acid transporter subunit [Escherichia coli OP50]
          Length = 163

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 52/163 (31%), Positives = 86/163 (52%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           +  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y    +Y    +V
Sbjct: 1   LAVVAVVGIVGWLFHNTVTNLNNRGITSGFAFLDRSAGFGIVQHLIDYQQGDTYGRVFIV 60

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNIPPL+ IFF Y +
Sbjct: 61  GLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFA 120

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           VL  LP P  ++      FL+NRGL  P+  +      F+ + 
Sbjct: 121 VLRNLPGPRQAVSAFDLAFLSNRGLYIPSPQLGDGFIAFILAV 163


>gi|260768889|ref|ZP_05877823.1| histidine ABC transporter permease protein HisM [Vibrio furnissii
           CIP 102972]
 gi|260616919|gb|EEX42104.1| histidine ABC transporter permease protein HisM [Vibrio furnissii
           CIP 102972]
 gi|315180583|gb|ADT87497.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio furnissii NCTC 11218]
          Length = 225

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   + V+G+ +++    ++R+            YI  F   G P L
Sbjct: 10  LPIYFSGLWTTVWLVGVALVIGLSIAIPL-AIARNSRNYAISTPAWAYIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    ++    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVSFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  K  R V+LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSTWKTYRRVVLPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+SL+ +I     +   + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMSLTFIIIFCFKKAEKRF 217



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 35/102 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T WL    ++    I   +   R S N  ++     Y+  FR  P LV ++ +
Sbjct: 13  YFSGLWTTVWLVGVALVIGLSIAIPLAIARNSRNYAISTPAWAYIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L +  L+    T +      
Sbjct: 73  YYGMDQFFPVKDTLWENAWFCALVSFVLNTSAYTAEIIRGAI 114


>gi|258622956|ref|ZP_05717971.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM573]
 gi|262166783|ref|ZP_06034520.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262172776|ref|ZP_06040454.1| amino acid ABC transproter permease protein [Vibrio mimicus MB-451]
 gi|258584739|gb|EEW09473.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM573]
 gi|261893852|gb|EEY39838.1| amino acid ABC transproter permease protein [Vibrio mimicus MB-451]
 gi|262026499|gb|EEY45167.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 223

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+L    + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALVLANI-RVFKVPVLDPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTLEMASWGLVFALILALVLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  + P
Sbjct: 75  YYGLPQIFP 83


>gi|227532737|ref|ZP_03962786.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189571|gb|EEI69638.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 496

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +S    TM        F+ ++GI++ L           K  + +   +I  F   G
Sbjct: 291 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLG-----VLPNKFAQGVATTFIYIF--RG 343

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 344 LPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 393

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 394 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 453

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 454 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 495



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  L    +  AT++G LVG   +  NK    +   ++ +FR +P +V+ 
Sbjct: 291 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLGVLPNKFAQGVATTFIYIFRGLPLMVLA 350

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 351 LFIYTGVPSL 360


>gi|262041102|ref|ZP_06014320.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041552|gb|EEW42605.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 199

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 12/210 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I V     G+++ L A   +R F       + L++I   +I G P +V +   Y  
Sbjct: 1   MTLWISVLGLAGGLIIGLVAG-FARCFGGWIANHIALVFIE--IIRGTPIVVQVMFIY-- 55

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P+               F +  + +   + A+IAEI R  ++++ +G  EA +ALG
Sbjct: 56  -FALPMAF------SDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALG 108

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+
Sbjct: 109 LSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRAL 168

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           EI      IYL ++++++  + RL  ++ +
Sbjct: 169 EIWSAVAVIYLIITLVLSFILRRLERRMKI 198


>gi|292487757|ref|YP_003530630.1| glutamine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292898986|ref|YP_003538355.1| glutamine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198834|emb|CBJ45944.1| glutamine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291553177|emb|CBA20222.1| glutamine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
 gi|312171871|emb|CBX80128.1| glutamine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 219

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V   V G+++ L A   +R +     + + L++I
Sbjct: 1   MQFDWSAIWPAIPILLEGARMTLLISVLGLVGGVLIGLVAG-FARAYGGWLSRNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIVVQVMFIY---FALPMAFT------DLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ RG  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINRGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMKI 218



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T  ++  G++   +IG + G  R     L   I  V++E+ R
Sbjct: 4   DWSAIWPAIPILLEGARMTLLISVLGLVGGVLIGLVAGFARAYGGWLSRNIALVFIELIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|228925611|ref|ZP_04088700.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|301052080|ref|YP_003790291.1| amino acid ABC transporter permease [Bacillus anthracis CI]
 gi|228834089|gb|EEM79637.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|300374249|gb|ADK03153.1| amino acid ABC transporter, permease [Bacillus cereus biovar
           anthracis str. CI]
          Length = 230

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/188 (32%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + ++ RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSIDRGQMEAARSLGMPYSLAMRRIVLPQAFRQSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|237730788|ref|ZP_04561269.1| glutamine ABC transporter permease [Citrobacter sp. 30_2]
 gi|226906327|gb|EEH92245.1| glutamine ABC transporter permease [Citrobacter sp. 30_2]
          Length = 219

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+++ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLIIGLAAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFSEAGLALGLSRTETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 65/210 (30%), Gaps = 4/210 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    IIG   G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLIIGLAAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++                + +     ++               F   
Sbjct: 64  GTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEA 123

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L L  T   RH          L  +    I  +      +L   +   +        
Sbjct: 124 GLALGLSRTETIRHVILPLALRRMLPPLGNQWIISIKD---TSLFIVIGVAELTRQGQEI 180

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G+  + E  S            ++ I+R
Sbjct: 181 IAGNFRALEIWSAVAVFYLIITLVLSFILR 210


>gi|92115412|ref|YP_575340.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91798502|gb|ABE60641.1| amino acid ABC transporter membrane protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 223

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 17/235 (7%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
              +        +      L+    T+  +       FV+GI+  L      R    +  
Sbjct: 1   MDVNFQFDWQAAIASIPHLLTGIPWTLLISFGGLAIGFVIGIIFGLL-----RINPLRVL 55

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +   + YI  F   G P LV +   +   +  P L                    A++  
Sbjct: 56  RWPAIAYIEVF--RGTPVLVQVLFIF---YGLPQLLGGPINAVVAG-------IAAIALN 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+I+EIVR G+ ++ +GQ EA ++LGL+     R ++ PQA+R +IP L +Q +  +K
Sbjct: 104 AGAYISEIVRGGVQSIEKGQREAGLSLGLSRIDTFRYIIWPQALRRMIPALGNQGIVSIK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  +LV  G   I  T  A+E+  +   +YL +++ ++  +  L  K
Sbjct: 164 DTSLFSVIGVGELVRQGQVYIATTFTALEVYFMVAMLYLVITLSLSTALRLLERK 218



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 38/71 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++F G+    +IG + G  R++  +++ W    Y+EVFR  P LV + F+
Sbjct: 19  LLTGIPWTLLISFGGLAIGFVIGIIFGLLRINPLRVLRWPAIAYIEVFRGTPVLVQVLFI 78

Query: 149 YKSVLSVLPIP 159
           +  +  +L  P
Sbjct: 79  FYGLPQLLGGP 89


>gi|220920916|ref|YP_002496217.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219945522|gb|ACL55914.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 232

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 21/230 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
                  L++         +F +G +L++     +R        + +  + +P+L    F
Sbjct: 18  WIWRGLLLSLALTLLAGSIAFGIGTLLAVVRVAGNRWVEWAIAAYVEFQRNVPMLVHILF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG+  L+  A+   ++                 + EF+   IA+    AA+I+E +RS
Sbjct: 78  WYFGVAALLPDAIADWVN---------------DHNSEFLFAAIAIGLCMAAYISEDLRS 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL A+P+GQ EA+ +LG  + +  R+++LPQAMR  +P L +Q L L KN+SLA+A+G A
Sbjct: 123 GLRAIPKGQYEASQSLGFGYAETMRVIVLPQAMRVSLPALVNQTLLLFKNTSLAMAIGVA 182

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L      I + T +  E   I   +YL LS  I    + L  ++ +  +
Sbjct: 183 ELTYRTREIESATFRTFEAFAIATALYLILSFTIMAVGSLLGRRLDIARR 232



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 36/79 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I  G + +  L       A  IGTL+   R++ N+ V W    YVE  RN+P LV I
Sbjct: 16  GAWIWRGLLLSLALTLLAGSIAFGIGTLLAVVRVAGNRWVEWAIAAYVEFQRNVPMLVHI 75

Query: 146 FFLYKSVLSVLPIPDHSIV 164
            F Y  V ++LP      V
Sbjct: 76  LFWYFGVAALLPDAIADWV 94


>gi|157691133|ref|YP_001485595.1| L-cystine ABC transporter membrane protein [Bacillus pumilus
           SAFR-032]
 gi|157679891|gb|ABV61035.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Bacillus pumilus SAFR-032]
          Length = 230

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/197 (25%), Positives = 97/197 (49%), Gaps = 14/197 (7%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
             T L+R    K  + +  +Y+S   + G P  V + + +             F   +  
Sbjct: 47  LVTALARMSKIKALRWIFSIYVSA--VRGTPLFVQLFIIFY-----------FFPTFNIT 93

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              + S  IA S    A+ +EI+R+ +++VP+GQ EA  ++G+THRK    V+LPQA+R 
Sbjct: 94  LDPYPSAIIAFSLNVGAYASEIIRASVLSVPKGQWEAGYSIGMTHRKTLVRVILPQAVRV 153

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMI 381
            IPPL++ +++L+K++SLA  +  A++      I      Q + I +    IY     ++
Sbjct: 154 SIPPLSNSFISLVKDTSLASQILVAEMFRKSQEIAAANLDQILFIYMEAALIYWVFCFIL 213

Query: 382 ALFMNRLNAKIALKEKK 398
           +L  +++  ++     +
Sbjct: 214 SLVQHQIEKRLDRYVAR 230



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 1/83 (1%)

Query: 76  IVPYTS-DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           ++P+     S+   ++ G   T  LA    I    I  +    R+S  K + WI  +YV 
Sbjct: 10  VIPWDLLQQSFWPMVMQGIYYTIPLAIIAFIIGIFIALVTALARMSKIKALRWIFSIYVS 69

Query: 135 VFRNIPPLVVIFFLYKSVLSVLP 157
             R  P  V +F ++    +   
Sbjct: 70  AVRGTPLFVQLFIIFYFFPTFNI 92


>gi|283833896|ref|ZP_06353637.1| glutamine ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
 gi|291070567|gb|EFE08676.1| glutamine ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
          Length = 219

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I +     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISILGLAGGLVIGLAAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFSEAGLALGLSRTETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 218



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 4/210 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG   G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISILGLAGGLVIGLAAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + F+Y ++                + +     ++               F   
Sbjct: 64  GTPIVVQVMFIYFALPMAFNDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFSEA 123

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L L  T   RH          L  +    I  +      +L   +   +        
Sbjct: 124 GLALGLSRTETIRHVILPLALRRMLPPLGNQWIISIKD---TSLFIVIGVAELTRQGQEI 180

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G+  + E  S            ++ I+R
Sbjct: 181 IAGNFRALEIWSAVAVFYLIITLVLSFILR 210


>gi|327472725|gb|EGF18152.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 286

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 111/268 (41%), Gaps = 16/268 (5%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV   +   ++    Y+ +L  +P       L          L    +T+   A   VF 
Sbjct: 15  EVIIVVTTYLLTTGWYEEILKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFG 73

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251
            +L +V ++      +  +       P+       + G P LV + L Y   F  P+L  
Sbjct: 74  ILLAMVFAIVKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLK 123

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               ++         P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T++
Sbjct: 124 AINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNK 183

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++P A     P L +  + L K +SLA + G  ++ +    I     +  E  +
Sbjct: 184 QVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFI 243

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               IY +++I+I      +   + +K+
Sbjct: 244 SVSLIYWAVNILIEQLGRWIEKMMDIKQ 271


>gi|317047528|ref|YP_004115176.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949145|gb|ADU68620.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 237

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPT 234
               + V + + G+ L++          +             + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIAGLALAMIFAGWESVRWQPLAWVGTGLVTLIRGLPEILVVLFIYFGASQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFHINLGLFSIPVQVQIENFDVSP-FLCGVIALAMLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGMKKSAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     L+   IYL +++     + R+ ++    E+
Sbjct: 192 KSIATRTQEPFTWYLVAAAIYLIITLFSQAVLRRIESRTTRFER 235


>gi|308186179|ref|YP_003930310.1| glutamine transport system permease protein glnP [Pantoea vagans
           C9-1]
 gi|308056689|gb|ADO08861.1| Glutamine transport system permease protein glnP [Pantoea vagans
           C9-1]
          Length = 219

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    +            I +   V G+ + L A   +R +       + L++I
Sbjct: 1   MEFDWSVIWPAMPALLEGAKLTLIISIIGLVGGLFIGLVAG-FARAYGGWITNNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAFP------DLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + R+  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRVKI 218



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++       A+L G   T  ++  G++    IG + G  R     +   I  V++E+ R
Sbjct: 4   DWSVIWPAMPALLEGAKLTLIISIIGLVGGLFIGLVAGFARAYGGWITNNIALVFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P +V + F+Y ++    P 
Sbjct: 64  GTPIVVQVMFIYFALPMAFPD 84


>gi|238757576|ref|ZP_04618760.1| Arginine transport system permease protein artQ [Yersinia aldovae
           ATCC 35236]
 gi|238704081|gb|EEP96614.1| Arginine transport system permease protein artQ [Yersinia aldovae
           ATCC 35236]
          Length = 238

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++       +R     +  TG     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLVLAMLFAVGESSRWKVVSYLTTGWVTILRGLPEILVVLFIYFGSSE 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L + ++  + L+     L     I    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LFMRLSDGFTLNLYLFELPIKLNIDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSTTAIFLRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|167561989|ref|ZP_02354905.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           oklahomensis EO147]
          Length = 229

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        LS    T+         SF+LG+V +      ++    +    +  LY  
Sbjct: 1   MFLQGYGPLILSGTWQTVKLAVLSLALSFLLGLVGA-----AAKLSKNRLSSGIGTLY-- 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T LI G+P LVL+ L +                       F +  + L     A+  E  
Sbjct: 54  TTLIRGVPDLVLMLLLFYSLQIWLNQLTDLMNWNQIDIDPFAAGVLVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   +G
Sbjct: 114 RGAFLSVPRGQLEAGSAYGMTNWQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSIIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            AD+V         T +     L+   IYL+++ +    +  L  + +   +K
Sbjct: 174 LADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRK 226



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +  + ++G +  A +LS N+L + I  +Y  + R +P LV+
Sbjct: 6   YGPLILSGTWQTVKLAVLSLALSFLLGLVGAAAKLSKNRLSSGIGTLYTTLIRGVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +  L+ S+   L      +   
Sbjct: 66  MLLLFYSLQIWLNQLTDLMNWN 87


>gi|71904066|ref|YP_280869.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|94988989|ref|YP_597090.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94990989|ref|YP_599089.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS10270]
 gi|94992882|ref|YP_600981.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS2096]
 gi|71803161|gb|AAX72514.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|94542497|gb|ABF32546.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94544497|gb|ABF34545.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS10270]
 gi|94546390|gb|ABF36437.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS2096]
          Length = 297

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+        F  VL +
Sbjct: 32  TSVFLTSGWAFYDYLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLSGATFGLVLAL 91

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + +L      +  +       P+  I    + G P LV + L Y     F K +  ++ F
Sbjct: 92  IFALVKINKVKLLY-------PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 144

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 145 DWNVNAIPASIFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 204

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  ++ +    +     +  E  +    +Y S
Sbjct: 205 PNATVVAIPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWS 264

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI++      +  K+A+K
Sbjct: 265 ISILMEQVGRLIENKMAIK 283


>gi|221201395|ref|ZP_03574434.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|221208876|ref|ZP_03581874.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221171332|gb|EEE03781.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221178663|gb|EEE11071.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
          Length = 246

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 28  WAGTVQTIELSVLSLTTAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 84

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 85  LLFYSIQIWLNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEA 144

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 145 GAAYGMSGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 204

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 205 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 243



 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 23  FGPVLWAGTVQTIELSVLSLTTAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 82

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 83  MLLLFYSI 90


>gi|46579088|ref|YP_009896.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46448501|gb|AAS95155.1| ABC transporter, permease protein, His/Glu/Gln/Arg/opine family
           [Desulfovibrio vulgaris str. Hildenborough]
          Length = 271

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 14/179 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +TG+ +  LY+ +  +   P LV + + Y              I          S  +AL
Sbjct: 103 RTGRLVARLYVES--VRNTPLLVQLFVTY------------FAIAPVFGLGRMASAVMAL 148

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +  A++AEI+R+G+ AVP+GQ EA+ +LG+        V+LPQA+R  +PPLT Q ++
Sbjct: 149 GVFEGAYMAEILRAGIAAVPQGQWEASRSLGMDEPGTYVQVILPQALRRALPPLTGQAVS 208

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+K+SSLA A+   +L     TII +T    E+ L+   IYL +++ ++     L  ++
Sbjct: 209 LVKDSSLASAIAIHELTMQAQTIIAETFLTFEVWLLTAAIYLCVTLSLSAVARLLERRM 267


>gi|297203990|ref|ZP_06921387.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|297148546|gb|EFH29017.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 327

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 6/196 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVS 263
           R       +A+   Y+       L  L+L    +      L    P    F     S ++
Sbjct: 105 RLSKSPVLRAVSWTYVWALRSVPLIVLLLFLYNFSALYKTLSVGVPFGPAFFSFDESRLA 164

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
            + +   + LS   AA+ AE+VR G+++V +GQ EAA ALGL      R ++ PQA+RSI
Sbjct: 165 TDMVIAVVGLSLNEAAYAAEVVRGGILSVDQGQHEAASALGLPKGYQFRKIVFPQALRSI 224

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIA 382
            P   +Q + L+K++SL   V   DL     ++ +   G  + ++L+    YL L+  ++
Sbjct: 225 TPNYVNQLIGLIKSTSLVFYVSLLDLFGTVQSMGSTYPGDIVPLLLVATVWYLILTSAVS 284

Query: 383 LFMNRLNAKIALKEKK 398
           +    +    A    +
Sbjct: 285 VVQFYVERHYARGATR 300



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 5/172 (2%)

Query: 68  AGFEIDQGIVPYTSDSSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           A F       P+     +    L      G V T  +A    +   + G L+   RLS +
Sbjct: 50  AQFVHGLVTNPFYQWDRFGYWFLRPTVLDGLVITLEVAAYSAVLGLLGGILLALARLSKS 109

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            ++  +   YV   R++P +V++ FLY        +       P     +   L+   + 
Sbjct: 110 PVLRAVSWTYVWALRSVPLIVLLLFLYNFSALYKTLSVGVPFGPAFFSFDESRLATDMVI 169

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                 +   ++   +V     +         +   LP  Y    ++F    
Sbjct: 170 AVVGLSLNEAAYAAEVVRGGILSVDQGQHEAASALGLPKGYQFRKIVFPQAL 221


>gi|119945610|ref|YP_943290.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119864214|gb|ABM03691.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 223

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 112/219 (51%), Gaps = 15/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L + ++TM+     F F+ +L ++L++      R F       L  ++IS F   G P L
Sbjct: 18  LKYLSVTMEMALLGFCFAIILAVILAVV-----RVFKIPLLHNLASVFISFF--RGTPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L   L++  P +              F +  I L+ + +A++AE +R+ ++ V + 
Sbjct: 71  VQLFL---LYYGLPQVMPIF-----AGVDAFSAAIIGLTLHFSAYMAESIRAAIMGVDKS 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEA +++G+T  +A R ++LPQA R   P L + +++++K++SLA  +G A++++    
Sbjct: 123 QMEACLSIGMTRLQAMRRIILPQAARVATPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQM 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             + + +  E  L    IY ++  + +   + L  +++ 
Sbjct: 183 EASSSFKYFESYLAVALIYWAVIELFSRLQHYLEIRMSR 221



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G   A I+  ++   R+    L+  +  V++  FR  P LV +F L
Sbjct: 17  LLKYLSVTMEMALLGFCFAIILAVILAVVRVFKIPLLHNLASVFISFFRGTPLLVQLFLL 76

Query: 149 YKSVLSVLP 157
           Y  +  V+P
Sbjct: 77  YYGLPQVMP 85


>gi|146294116|ref|YP_001184540.1| polar amino acid ABC transporter inner membrane subunit [Shewanella
           putrefaciens CN-32]
 gi|145565806|gb|ABP76741.1| polar amino acid ABC transporter, inner membrane subunit
           [Shewanella putrefaciens CN-32]
          Length = 226

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  F+ +LG VL +  T   +   +   +    LY+   +I G P +V + + Y +
Sbjct: 30  VTLIVTFFAMLLGAVLGIGTT-FMKMSSKWYIRFPANLYVG--VIRGTPVVVQLVILYFI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +  +    +  +  IA    + A+I+EI+R+G+ AV +GQ EAA +LG
Sbjct: 87  ------------VLSALDVDKITAAIIAFGLNSGAYISEIIRAGIQAVDKGQTEAARSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     + ++LPQA+++I+P L ++++ LLK +++   +G  DL+  G  I ++T +  
Sbjct: 135 LSQAITMKSIILPQAIKNILPALGNEFIVLLKETAVIGFIGGVDLMRAGEIIRSRTFEDS 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +     IYL L+      +++   ++   +
Sbjct: 195 VPLFTCALIYLFLTYSFTFMLSKFEKRLKQSD 226



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  + F  M+   ++G      ++S+   + +   +YV V R  P +V +  L
Sbjct: 24  ILNGLKVTLIVTFFAMLLGAVLGIGTTFMKMSSKWYIRFPANLYVGVIRGTPVVVQLVIL 83

Query: 149 YKSVLSV 155
           Y  VLS 
Sbjct: 84  YFIVLSA 90


>gi|300904466|ref|ZP_07122312.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|301304261|ref|ZP_07210375.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|309793851|ref|ZP_07688277.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|300403628|gb|EFJ87166.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300840387|gb|EFK68147.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|308122808|gb|EFO60070.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|315257198|gb|EFU37166.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
          Length = 347

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|769792|emb|CAA60103.1| artQ [Escherichia coli K-12]
          Length = 238

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA----------TRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + ++G+ L++F              +        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIVGLALAMFFAVWESAKWRPVAWAGSALVTILRGLPEILVVLFIYFGSSQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++     +     I    VSP F+   IALS   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++P  +R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 VGQWESGQALGLSKSAIFFRLVMPADVRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 192 KSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 236


>gi|172056977|ref|YP_001813437.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
 gi|171989498|gb|ACB60420.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
          Length = 218

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 13/223 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              + +    +    ++ + + + G+++ +    L      K G    + +  T +  G 
Sbjct: 8   QDSIPYILQGIPVLFQVVIVAAIAGMLIGIVVAAL---KITKNGFVRFIGHAYTAVFRGT 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P ++ +A+   +HF  P L  +       V+  + S  IA S  + A+I+EI+R+G+ AV
Sbjct: 65  PLILQLAI---IHFGLPQLTGY-------VTTGYQSAIIAFSLNSGAYISEIIRAGIQAV 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA ALG+ + K  R ++LPQA ++I+P + ++ + L K S+L   VG  D++  
Sbjct: 115 DRGQWEAADALGIPYMKQLRSIILPQAFKNILPAIMNELITLTKESALISTVGVLDVMRR 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +  +     E +L   F+Y  L + ++L   ++   +   
Sbjct: 175 AQVVGGEKALYFEPLLFAGFVYFVLVMGLSLIGQQVEKAMRKS 217



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 35/80 (43%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ +T        IL G    F +     I   +IG +V A +++ N  V +I   Y  V
Sbjct: 1   MIDFTKIQDSIPYILQGIPVLFQVVIVAAIAGMLIGIVVAALKITKNGFVRFIGHAYTAV 60

Query: 136 FRNIPPLVVIFFLYKSVLSV 155
           FR  P ++ +  ++  +  +
Sbjct: 61  FRGTPLILQLAIIHFGLPQL 80


>gi|258509857|ref|YP_003172608.1| ABC transporter glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
 gi|257149784|emb|CAR88757.1| ABC transporter, glutamine-binding periplasmic protein
           [Lactobacillus rhamnosus GG]
          Length = 484

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  +     TM        F+ ++GI++             K  + +   +I  F   G
Sbjct: 279 WSTLMGGLRETMVLTIVAIFFATLVGILIGFLG-----VIPNKLCQGIATTFIYIF--RG 331

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 332 LPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 381

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 382 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 441

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 442 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 483



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            + ++ G   T  L    +  AT++G L+G   +  NKL   I   ++ +FR +P +V+ 
Sbjct: 279 WSTLMGGLRETMVLTIVAIFFATLVGILIGFLGVIPNKLCQGIATTFIYIFRGLPLMVLA 338

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 339 LFIYTGVPSL 348


>gi|15925403|ref|NP_372937.1| ABC transporter (permease protein) [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927991|ref|NP_375524.1| hypothetical protein SA2201 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21284064|ref|NP_647152.1| hypothetical protein MW2335 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|156980728|ref|YP_001442987.1| hypothetical protein SAHV_2397 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|262048821|ref|ZP_06021702.1| hypothetical protein SAD30_0668 [Staphylococcus aureus D30]
 gi|262051565|ref|ZP_06023786.1| hypothetical protein SA930_1333 [Staphylococcus aureus 930918-3]
 gi|13702362|dbj|BAB43503.1| SA2201 [Staphylococcus aureus subsp. aureus N315]
 gi|14248187|dbj|BAB58575.1| ABC transporter (permease protein) [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|21205507|dbj|BAB96200.1| MW2335 [Staphylococcus aureus subsp. aureus MW2]
 gi|156722863|dbj|BAF79280.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|259160549|gb|EEW45572.1| hypothetical protein SA930_1333 [Staphylococcus aureus 930918-3]
 gi|259163079|gb|EEW47640.1| hypothetical protein SAD30_0668 [Staphylococcus aureus D30]
 gi|285818074|gb|ADC38561.1| amino acid ABC transporter, permease protein [Staphylococcus aureus
           04-02981]
          Length = 164

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 88/164 (53%), Gaps = 1/164 (0%)

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V + + +    +   L   +     T++P  ++  I LS    A+ +EI+R G+I++P
Sbjct: 1   MIVQLFIIFYGIPELGRLLTNDADNQWTLAP-VVAAIIGLSLNVGAYASEIIRGGIISIP 59

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA ++G+T+ +  + ++LPQA+R  IP L + +L+L+K++SL   +  A++    
Sbjct: 60  KGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKA 119

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             + + T + + I ++   +Y  +  +I++      + I    +
Sbjct: 120 QEVASTTYEYLTIYVLVALMYWVVCFIISIIQGIYESYIERGYR 163


>gi|307246272|ref|ZP_07528353.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306852881|gb|EFM85105.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 223

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L         K      I   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETSKQPCVSKPTS---IFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEK----ITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEKRFTRFER 220


>gi|307637630|gb|ADN80080.1| Putative ABC-type amino-acid transporter [Helicobacter pylori 908]
 gi|325996224|gb|ADZ51629.1| Putative ABC-type amino-acid transporter permease protein
           [Helicobacter pylori 2018]
 gi|325997818|gb|ADZ50026.1| Putative amino-acid ABC transporter permease protein [Helicobacter
           pylori 2017]
          Length = 240

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+   ++ IV++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 44  PLAITSFILGLLIAIVVALIKIAPPKHFMHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|259502042|ref|ZP_05744944.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|259170006|gb|EEW54501.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
          Length = 488

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 17/218 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+       V + V G++L +           K   A+    I  F   G+P +
Sbjct: 288 LHGLWMTIQLTVVGIVLALVFGLILGVLG-----VMQSKVANAISSTVIYIF--RGIPMI 340

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L + ++   P     N IG     P F++  + L     A+I  IV+ G  AV  G
Sbjct: 341 V---LAFFIYMGLP-----NVIGHKV--PLFLAGVVTLMLDEGAYIGAIVKGGFNAVDPG 390

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL +RKA   V+ PQ ++ ++P L +Q++  LK++S+  A+G  +L   G  
Sbjct: 391 QWEAARSLGLPYRKALIKVVAPQGIKIMVPSLVNQFIITLKDTSILSAIGVMELTQTGTV 450

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+Q  +   + LI   IY+ +  ++    N +  ++A
Sbjct: 451 IISQNMEGFRMWLIIGTIYIIIITLLTWLSNYIQKRMA 488



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 20/127 (15%)

Query: 50  NNME-KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT-----------------AILV 91
            N+  +  ++ GI +L+E    ++ Q I  YT     A                  A+L 
Sbjct: 232 QNLALQKKINNGIDWLNETG--QMKQIINKYTKSDKTAKSSTASRTIWGLLKANRVALLH 289

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L   G++ A + G ++G   +  +K+   I    + +FR IP +V+ FF+Y  
Sbjct: 290 GLWMTIQLTVVGIVLALVFGLILGVLGVMQSKVANAISSTVIYIFRGIPMIVLAFFIYMG 349

Query: 152 VLSVLPI 158
           + +V+  
Sbjct: 350 LPNVIGH 356


>gi|255327588|ref|ZP_05368654.1| L-cystine transport system permease protein TcyB [Rothia
           mucilaginosa ATCC 25296]
 gi|255295262|gb|EET74613.1| L-cystine transport system permease protein TcyB [Rothia
           mucilaginosa ATCC 25296]
          Length = 224

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 14/206 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF L +++ +  +  +R         L  LYI  F   G P LV + + +  
Sbjct: 22  VTIPLSLISFALALLVGIV-SAGARTSRFAPVNWLAWLYIWVF--RGTPLLVQLFIVFY- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                + +  I +S +T A++AE  RS + A+PRGQ EAA  L 
Sbjct: 78  ----------GLPKVGIALDVWSAAIITMSLHTGAYVAETFRSAVAAIPRGQFEAAATLN 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R V++PQA+R  +P L + +++L+K +SL   +   DL   G  I ++T + +
Sbjct: 128 FTRMQTLRHVVIPQAVRIALPNLGNNFIDLIKGTSLVSVISMVDLFQTGKQIASRTFEPL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
            +      IYL +  ++    + L  
Sbjct: 188 AMYSEVAIIYLVIFTLLTAAQSALEK 213



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 29/70 (41%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L+      A ++G +    R S    V W+  +Y+ VFR  P LV +F ++  +
Sbjct: 20  LAVTIPLSLISFALALLVGIVSAGARTSRFAPVNWLAWLYIWVFRGTPLLVQLFIVFYGL 79

Query: 153 LSVLPIPDHS 162
             V    D  
Sbjct: 80  PKVGIALDVW 89


>gi|157693109|ref|YP_001487571.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157681867|gb|ABV63011.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 237

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 9/239 (3%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +I + F +      L     T+         S ++G V +       R F     + L 
Sbjct: 2   QTIDIQFAIDQVPHILKGVPFTLLIALVSMAVSLIIGSVFAFI-----RLFRIPVLRQLV 56

Query: 221 LLYISTFLIFGLPTLVLIA-LKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTA 278
            LY+S F   G P +V +    Y L F    +   F       +        +  S ++A
Sbjct: 57  TLYVSFF--RGTPLIVQLFAFFYGLPFVLTKMSDTFGLTFHPDMVSPLAVALMTFSLHSA 114

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E+VRS L+AV +GQ+EAA  +G+T R+A   ++LPQA    +P L +Q + LLK +
Sbjct: 115 AHLTEVVRSALLAVDKGQLEAAKIVGMTTRQAMMRIILPQAFVVALPNLGNQLIQLLKAT 174

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL+  +G  +++ +   I N   Q +E  L+   IY  LSI   L    L  ++++  +
Sbjct: 175 SLSFTIGVLEIMGISRIIANDGYQFLETYLVSALIYWLLSIFFELAFALLEKRVSVYGR 233



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +A   M  + IIG++    RL    ++  +  +YV  FR  P +V +F  
Sbjct: 16  ILKGVPFTLLIALVSMAVSLIIGSVFAFIRLFRIPVLRQLVTLYVSFFRGTPLIVQLFAF 75

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           +  +  VL     +  L F
Sbjct: 76  FYGLPFVLTKMSDTFGLTF 94


>gi|312863033|ref|ZP_07723271.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|322516151|ref|ZP_08069084.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|311100569|gb|EFQ58774.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|322125327|gb|EFX96682.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 307

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/286 (19%), Positives = 111/286 (38%), Gaps = 11/286 (3%)

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            ++G   L+    +A      VE+      ++ +  +    +S                 
Sbjct: 17  VIIGLIGLAVVVALAIPVSWLVEIL--WSYILQLVTIVFKWISSWMPAGKLFSWKAVFDA 74

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + +    LT+           +L +V ++      R  +       P+  +    + G
Sbjct: 75  VPKIVEHLPLTLGLTIAGAFLGLILALVFAVVKINRVRILY-------PIQAVFVSFLRG 127

Query: 232 LPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            P LV + L Y     F + + G+F         P  +    A +   AA+++E +R+ +
Sbjct: 128 TPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYMSETIRAAI 187

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + G  ++
Sbjct: 188 QAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLAFSAGIVEM 247

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +    +     +  E  +    +Y  +SI+I      +   +A+K
Sbjct: 248 YAQAQILGGADYRYFERYISVALVYWVISILIENIGRSVENHMAIK 293


>gi|227887998|ref|ZP_04005803.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein YhdY [Escherichia coli 83972]
 gi|300991069|ref|ZP_07179490.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301047873|ref|ZP_07194920.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|227835394|gb|EEJ45860.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein YhdY [Escherichia coli 83972]
 gi|300300216|gb|EFJ56601.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300406990|gb|EFJ90528.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|315294823|gb|EFU54166.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
          Length = 347

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPYRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEDTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV++PQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|22536670|ref|NP_687521.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010606|ref|NP_735001.1| hypothetical protein gbs0537 [Streptococcus agalactiae NEM316]
 gi|76787397|ref|YP_329224.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|22533510|gb|AAM99393.1|AE014214_7 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|23094959|emb|CAD46181.1| unknown [Streptococcus agalactiae NEM316]
 gi|76562454|gb|ABA45038.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|319744567|gb|EFV96920.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus agalactiae ATCC 13813]
          Length = 230

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 116/236 (49%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F     +       +T+  +  +  F  ++G++++L      +  +      L   
Sbjct: 1   MNFSFLPQYWSYFNYGVMVTIMISTCVVFFGTIIGVLIALV-----KRTNLHFLTILANF 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+   L   +F          +   I +S  + A+I
Sbjct: 56  YVWVF--RGTPMVVQIMIAFAWMHFNN--LPTISFGVLDLDFTRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP GQ+EAA +LG+  +   R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G  +L +   +++  T   +  +L   F YL L+ +++  + ++   +    K
Sbjct: 172 QTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQMEKYLGKGVK 227



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    Y +    G + T  ++   +   TIIG L+   + +    +  +   YV VFR 
Sbjct: 3   FSFLPQYWSYFNYGVMVTIMISTCVVFFGTIIGVLIALVKRTNLHFLTILANFYVWVFRG 62

Query: 139 IPPLVVIFFLYKSV 152
            P +V I   +  +
Sbjct: 63  TPMVVQIMIAFAWM 76


>gi|227820462|ref|YP_002824433.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339461|gb|ACP23680.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 219

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 14/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + V + + G +L  FA  L+R    K  +     YI   +I G+P L+++ L Y 
Sbjct: 19  QWTILLTVIALIGGGLLG-FAVALARTSQLKPVRIAAASYIQ--IIQGIPVLMILFLSYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                               P  ++   +++ Y + ++AEI R  + AVP+ Q EA+ +L
Sbjct: 76  -----------GLSLAGFELPPLIAAGASMTIYASGYLAEIWRGCIQAVPKQQWEASESL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            +T  +  R V+LPQAMR  +PP     + ++KN+S+   +GF +L   G  I N T Q 
Sbjct: 125 AMTRLQQYRYVILPQAMRICLPPTVGFAVQVVKNTSITSIIGFVELARAGQLINNATFQP 184

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             + L    +Y  +   ++     L  ++     +
Sbjct: 185 FRVFLAVAALYFVVCYPLSQLSRLLERRLHAGSSR 219



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 33/99 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L    +I   ++G  V   R S  K V      Y+++ + IP L+++F  
Sbjct: 14  LLFSLQWTILLTVIALIGGGLLGFAVALARTSQLKPVRIAAASYIQIIQGIPVLMILFLS 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +          I     M +   G           A
Sbjct: 74  YYGLSLAGFELPPLIAAGASMTIYASGYLAEIWRGCIQA 112


>gi|239907741|ref|YP_002954482.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239797607|dbj|BAH76596.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 230

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 108/229 (47%), Gaps = 9/229 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F  F   R +      + T+  + V + + G+ + +    L R +  +        Y+S
Sbjct: 3   DFFAFAWERIIPALDAGLWTSILLIVPASLFGVAIGVSVGAL-RVYGPRPVVKTLDAYVS 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P +V +   Y  +F  P +   +F   + V     +  +  +  + A+ +E +
Sbjct: 62  LF--RGTPLVVQL---YFWYFALPYVRIGDF---ALVLSPMWAAIVGFALCSGAYQSEYI 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL+++ RGQ+ AA ALG+T  ++   V+LPQA R  +P   ++ + L+K SSLA  + 
Sbjct: 114 RGGLLSIKRGQLRAAQALGMTPFQSVTSVVLPQAFRRALPGCGNEIIYLIKYSSLASIIT 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +DL  +G ++   + +  E+ ++    YL+L  + +  +     K+ +
Sbjct: 174 VSDLTGMGRSLAKSSFRNTEVFIVVGLYYLALVTIASFLLKIAEKKLEI 222



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 37/104 (35%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G   +  L     +    IG  VGA R+   + V      YV +FR  P +V ++F
Sbjct: 15  ALDAGLWTSILLIVPASLFGVAIGVSVGALRVYGPRPVVKTLDAYVSLFRGTPLVVQLYF 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
            Y ++  V       ++ P    +    L       +      +
Sbjct: 75  WYFALPYVRIGDFALVLSPMWAAIVGFALCSGAYQSEYIRGGLL 118


>gi|325695202|gb|EGD37103.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 286

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 16/268 (5%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV   +   ++    Y+  L  +P       L          L    +T+   A   VF 
Sbjct: 15  EVIMVVTTYLLTTGWYEEFLKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFG 73

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251
            +L +V ++      +  +       P+       + G P LV + L Y   F  P+L  
Sbjct: 74  ILLAMVFAIVKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLK 123

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               ++         P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T++
Sbjct: 124 AINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNK 183

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++P A     P L +  + L K +SLA + G  ++ +    I     +  E  +
Sbjct: 184 QVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFI 243

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               IY +++I+I      +   + +K+
Sbjct: 244 SVSLIYWAVNILIEQLGRWIEKMMDIKQ 271


>gi|315289022|gb|EFU48420.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
          Length = 347

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L    R  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRSR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|300716009|ref|YP_003740812.1| hypothetical protein EbC_14300 [Erwinia billingiae Eb661]
 gi|299061845|emb|CAX58961.1| uncharacterized protein [Erwinia billingiae Eb661]
          Length = 219

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V   V G+++ L A   +R +     + + L++I
Sbjct: 1   MQFDWSAIWPSIPALLEGARLTLWISVLGLVGGLIIGLVAG-FARAYGGWISRNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P+                 +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIVVQVMFIY---FALPMAFT------DLRIDPLSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++  G  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHNGFREAGLALGLSRRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL +++M++  + R+  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVIYLFITLMLSFILRRIEKRMKI 218



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 37/79 (46%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++      A+L G   T W++  G++   IIG + G  R     +   I  V++E+ R
Sbjct: 4   DWSAIWPSIPALLEGARLTLWISVLGLVGGLIIGLVAGFARAYGGWISRNIALVFIELIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|269965300|ref|ZP_06179421.1| putative amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 40B]
 gi|269830101|gb|EEZ84329.1| putative amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 40B]
          Length = 246

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 119/245 (48%), Gaps = 29/245 (11%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSR 209
                       G+      ++    T+  +    +F+  LG++++L A       +   
Sbjct: 22  WGWYVLDPSTDQGLTNLKFLIAGFNDTIQVSLLSMLFAMSLGLIVALPALSDSASLKWIN 81

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + +  +++P+L +  ++ +G+PTL+ ++L +                       F + 
Sbjct: 82  RIYVEVIRSVPVLVLLLWVYYGMPTLLDVSLNH-----------------------FWAG 118

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL++ +  RLV+LPQA R I+PPL +
Sbjct: 119 VIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLSYWQKMRLVILPQAFRQILPPLGN 178

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++ +LK SSL   +G +DL      ++      +EI    +  YL L + ++  +  L 
Sbjct: 179 QFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILFVSQAVRWLE 238

Query: 390 AKIAL 394
            +IA+
Sbjct: 239 KRIAI 243



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 29/58 (50%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
               +    ++ GF +T  ++   M+ A  +G +V    LS +  + WI R+YVEV R
Sbjct: 32  DQGLTNLKFLIAGFNDTIQVSLLSMLFAMSLGLIVALPALSDSASLKWINRIYVEVIR 89


>gi|146311739|ref|YP_001176813.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145318615|gb|ABP60762.1| amino acid ABC transporter membrane protein, PAAT family
           [Enterobacter sp. 638]
          Length = 306

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 1/264 (0%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R +  +  +F L   V SV   P     +    F +   L     T+         S V
Sbjct: 16  WRTVGAIAALFVLAIVVQSVAFNPRWEWAVFARWFFDPVILEGVGQTLLLTLIGTALSVV 75

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-F 254
           +G +L+L     S          + L      ++  +       L   L    P     +
Sbjct: 76  IGGMLALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTSITW 135

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  V  +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  +
Sbjct: 136 GSFETINVLGQFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRI 195

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R+I+P   ++ ++L K +++   +   +L      I N+T + I ++++    Y
Sbjct: 196 ILPQALRTILPAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAVWY 255

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ +++   + +   +A  E++
Sbjct: 256 LVITTVLSAIQHIVERGLARSERR 279


>gi|19746578|ref|NP_607714.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes MGAS8232]
 gi|19748793|gb|AAL98213.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes MGAS8232]
          Length = 297

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+        F  VL +
Sbjct: 32  TSVFLTSGWAFYDHLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLSGATFGLVLAL 91

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + +L      +  +       P+  I    + G P LV + L Y     F K +  ++ F
Sbjct: 92  IFALVKINKVKLLY-------PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 144

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 145 DWNVNAIPASIFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 204

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  ++ +    +     +  E  +    +Y S
Sbjct: 205 PNATVVAIPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWS 264

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI++      +  K+A+K
Sbjct: 265 ISILMEQVGRLIENKMAIK 283


>gi|47097702|ref|ZP_00235210.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 1/2a F6854]
 gi|47013921|gb|EAL04946.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Listeria monocytogenes str. 1/2a F6854]
          Length = 136

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/132 (31%), Positives = 82/132 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+
Sbjct: 5   AFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNIL 64

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L ++++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  
Sbjct: 65  PALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRL 124

Query: 385 MNRLNAKIALKE 396
           +     ++   +
Sbjct: 125 LGVAERRMRTSD 136


>gi|120556217|ref|YP_960568.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinobacter aquaeolei VT8]
 gi|120326066|gb|ABM20381.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Marinobacter aquaeolei VT8]
          Length = 240

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 94/228 (41%), Gaps = 5/228 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L      + T   +   S V+G+V+++    L+     K       +++ T+L 
Sbjct: 14  IFTAMTLMEYWDGLVTTVHLVFLSLVIGLVVAVP---LAILRTVKNPFVSGPIWLYTYLF 70

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + Y      P +   +               +A +  TAA+  EI+R  +
Sbjct: 71  RGTPLLIQLYIIYYGVAQIPGIQ--DTFWWEIFKEPLYPALLAFTLNTAAYTTEIIRGAI 128

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           I+ P G++EAA A G+      R ++LP A R  +   +++ + +L  S++A  V   DL
Sbjct: 129 ISTPNGEIEAAKAYGMNWFLRMRRIILPSAARRAVQAYSNEVIFMLHASAIASVVTIVDL 188

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I ++     E  +     Y++L+ ++     +L   +   ++
Sbjct: 189 TGAARNIYSRFYAPFEAFIFVALCYMALTFILVFVFRKLENHLLRHQR 236



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 40/107 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G V T  L F  ++   ++   +   R   N  V+    +Y  +FR  P L+ ++ +
Sbjct: 23  YWDGLVTTVHLVFLSLVIGLVVAVPLAILRTVKNPFVSGPIWLYTYLFRGTPLLIQLYII 82

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           Y  V  +  I D      F   L    L+F   T     +I   + +
Sbjct: 83  YYGVAQIPGIQDTFWWEIFKEPLYPALLAFTLNTAAYTTEIIRGAII 129


>gi|301067874|ref|YP_003789897.1| amino acid ABC transporter/signal transduction system periplasmic
           protein [Lactobacillus casei str. Zhang]
 gi|300440281|gb|ADK20047.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus casei str.
           Zhang]
          Length = 487

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +S    TM        F+ ++GI++ L           K  + +   +I  F   G
Sbjct: 282 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLG-----VLPNKFAQGVATTFIYIF--RG 334

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 335 LPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 384

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 385 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 444

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 445 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 486



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  L    +  AT++G LVG   +  NK    +   ++ +FR +P +V+ 
Sbjct: 282 WGTLMSGLEETMVLTVVAIFFATLVGILVGLLGVLPNKFAQGVATTFIYIFRGLPLMVLA 341

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 342 LFIYTGVPSL 351


>gi|153827643|ref|ZP_01980310.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|149737881|gb|EDM52786.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
          Length = 223

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+LF   + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANI-RVFKVPVLAPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQVFPLLVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+   +   R+    ++A + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLAPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  V P
Sbjct: 75  YYGLPQVFP 83


>gi|238028317|ref|YP_002912548.1| amino acid ABC transporter permease [Burkholderia glumae BGR1]
 gi|237877511|gb|ACR29844.1| Amino acid ABC transporter, permease protein [Burkholderia glumae
           BGR1]
          Length = 229

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S     VL L     ++    +    L  LY  T LI G+P LVL+ L + 
Sbjct: 15  WQTIKLAVLSLAFAFVLGLLGAA-AKLSRNRITNGLGTLY--TTLIRGVPDLVLMLLLFY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F +  + L     A+  E  R   ++VPRGQ+EA  A 
Sbjct: 72  SLQIWLNQFTDMMNWDQIDIDPFAAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGAAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+++ +    V+ PQ MR  +P + + +  L+K+++L   +G AD+V         T + 
Sbjct: 132 GMSNWRVFSRVMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKASQDAGKGTLRF 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L+   IYL+++ +    +  L  + +   +K
Sbjct: 192 FFFTLLAGAIYLAITTISNFVLMWLEKRYSTGVRK 226



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   +  A ++G L  A +LS N++   +  +Y  + R +P LV+
Sbjct: 6   YGPLILSGTWQTIKLAVLSLAFAFVLGLLGAAAKLSRNRITNGLGTLYTTLIRGVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +  L+ S+           +  F   +N   +             F++ 
Sbjct: 66  MLLLFYSL--------QIWLNQFTDMMNWDQIDIDPFAAGVLVLGFIYG 106


>gi|258626080|ref|ZP_05720931.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM603]
 gi|258581606|gb|EEW06504.1| amino acid ABC transproter, permease protein [Vibrio mimicus VM603]
          Length = 223

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+L    + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLNYLGTTLEMASWGLVFALILALVLANI-RVFKVPVLDPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLNYLGTTLEMASWGLVFALILALVLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  + P
Sbjct: 75  YYGLPQIFP 83


>gi|228931858|ref|ZP_04094754.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228827838|gb|EEM73576.1| Amino acid ABC transproter, permease [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 233

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 44  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 89

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + ++ RGQ+EAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 90  GAIALAIHNGAYITEIFRGSIQSIDRGQLEAARSLGMPYPLAMRRIVLPQAFRQSIPPLG 149

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 150 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 209

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 210 EKRLQRKE 217


>gi|330500965|ref|YP_004377834.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328915251|gb|AEB56082.1| amino acid ABC transporter, permease protein [Pseudomonas mendocina
           NK-01]
          Length = 219

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 12/223 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           ++  +  +L IV ++ A  L R       + L + YI  F   G   L
Sbjct: 5   LPLLLQGAWVTVQVTFWGSLLAIVSAVIA-ALGRLSPIAPLRWLAITYIEIF--RGTSLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y +    P   +            F    + L  +  A+ AE++R  + +V +G
Sbjct: 62  VQLFWLYFVLPMPPFNVE---------MSAFTVAIVGLGLHIGAYGAEVMRGAIRSVAKG 112

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  AL +   K    ++LPQA+ + IPP T+  + LLKN+SL   +  +DL      
Sbjct: 113 QYEACTALNMRPSKRFMRIILPQALLAAIPPGTNLLIELLKNTSLVSLITLSDLAFRARQ 172

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   T   +EI  + + +Y  ++ +I L M  L  +++    +
Sbjct: 173 LDQATFMTLEIFALTLVLYFVMAQVINLGMRLLEKRLSRGRMR 215



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F G + A +   +   GRLS    + W+   Y+E+FR    LV +F+L
Sbjct: 8   LLQGAWVTVQVTFWGSLLAIVSAVIAALGRLSPIAPLRWLAITYIEIFRGTSLLVQLFWL 67

Query: 149 YKSVL 153
           Y  + 
Sbjct: 68  YFVLP 72


>gi|254720342|ref|ZP_05182153.1| amino acid ABC transporter, permease protein [Brucella sp. 83/13]
 gi|306837436|ref|ZP_07470312.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|306407479|gb|EFM63682.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 226

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 44  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 91  AALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 151 SNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 210

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 211 LERRFGRY 218



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 9   ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 69  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 99


>gi|254699907|ref|ZP_05161735.1| amino acid ABC transporter, permease protein [Brucella suis bv. 5
           str. 513]
 gi|254705829|ref|ZP_05167657.1| amino acid ABC transporter, permease protein [Brucella
           pinnipedialis M163/99/10]
 gi|254711057|ref|ZP_05172868.1| amino acid ABC transporter, permease protein [Brucella
           pinnipedialis B2/94]
 gi|256015453|ref|YP_003105462.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|256029438|ref|ZP_05443052.1| amino acid ABC transporter, permease protein [Brucella
           pinnipedialis M292/94/1]
 gi|256059129|ref|ZP_05449338.1| amino acid ABC transporter, permease protein [Brucella neotomae
           5K33]
 gi|260167469|ref|ZP_05754280.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261313256|ref|ZP_05952453.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261750383|ref|ZP_05994092.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|255998113|gb|ACU49800.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261302282|gb|EEY05779.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261740136|gb|EEY28062.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 226

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 44  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 91  AALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 151 SNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 210

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 211 LERRFGRY 218



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 9   ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 69  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 99


>gi|167911825|ref|ZP_02498916.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 112]
          Length = 229

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    ++L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLAAAVLLGLVG-AVAKLSHNRVLRAIATGY--TTLIRSMPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLMSWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GSAYGMNGMRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++    L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTASNLVLGQLEKRYSIGVRH 226



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G V T  L+   +  A ++G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPLIWAGTVQTIELSVLSLAAAVLLGLVGAVAKLSHNRVLRAIATGYTTLIRSMPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +  L+ S+   L      +   
Sbjct: 66  MLLLFYSIQIWLNQFTDLMSWD 87


>gi|167461573|ref|ZP_02326662.1| glutamine ABC transporter (permease) [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322381528|ref|ZP_08055507.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154535|gb|EFX46832.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 217

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 18/208 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 SFVLG++ ++      R    +  + +   Y+  F       L+LI + + L  
Sbjct: 26  LLALAGSFVLGVIFAVM-----RISTFRLLRIIGTAYVEFFRNIP---LLLIVMFFYLGS 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L              F +  I L+ YT+AFIAE +R+G++AVP+GQ+EA  + GLT
Sbjct: 78  GNLGLNL----------DGFEAGTIGLAIYTSAFIAEAIRAGILAVPKGQVEAGRSSGLT 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  + ++L QA++ +IPPL +Q+LNL+KNSS+   V   DL+  G  I ++T +    
Sbjct: 128 YLQTMQYIVLLQAIKIVIPPLGNQFLNLIKNSSVLGVVAGLDLMYFGDLINSETFKVFGT 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +     YL L+I ++L ++ L  ++A 
Sbjct: 188 YIFVAMFYLLLTIPLSLIISILERRLAR 215



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 36/71 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    + GF NT   +   +  + ++G +    R+S  +L+  I   YVE FRNIP L++
Sbjct: 10  HLDLYMEGFGNTVKASLLALAGSFVLGVIFAVMRISTFRLLRIIGTAYVEFFRNIPLLLI 69

Query: 145 IFFLYKSVLSV 155
           + F Y    ++
Sbjct: 70  VMFFYLGSGNL 80


>gi|134276958|ref|ZP_01763673.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|167825105|ref|ZP_02456576.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 9]
 gi|167895193|ref|ZP_02482595.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 7894]
 gi|167903579|ref|ZP_02490784.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei NCTC 13177]
 gi|167919826|ref|ZP_02506917.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei BCC215]
 gi|217420477|ref|ZP_03451982.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|226199915|ref|ZP_03795465.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|254184251|ref|ZP_04890841.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1655]
 gi|254191285|ref|ZP_04897789.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254296910|ref|ZP_04964363.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 406e]
 gi|134250608|gb|EBA50687.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|157807034|gb|EDO84204.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 406e]
 gi|157938957|gb|EDO94627.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184214782|gb|EDU11825.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           pseudomallei 1655]
 gi|217395889|gb|EEC35906.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|225927971|gb|EEH24008.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
          Length = 229

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    ++L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLAAAVLLGLVG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLMSWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GSAYGMNGMRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++    L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTASNLVLGQLEKRYSIGVRH 226



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G V T  L+   +  A ++G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPLIWAGTVQTIELSVLSLAAAVLLGLVGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +  L+ S+   L      +   
Sbjct: 66  MLLLFYSIQIWLNQFTDLMSWD 87


>gi|320174663|gb|EFW49796.1| Histidine ABC transporter, permease protein HisM [Shigella
           dysenteriae CDC 74-1112]
          Length = 238

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          + L+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLGLTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|39997744|ref|NP_953695.1| amino acid ABC transporter permease [Geobacter sulfurreducens PCA]
 gi|39984636|gb|AAR36022.1| amino acid ABC transporter, permease protein, putative [Geobacter
           sulfurreducens PCA]
 gi|298506680|gb|ADI85403.1| amino acid ABC transporter, membrane protein, putative [Geobacter
           sulfurreducens KN400]
          Length = 262

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 13/255 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P  +V   +   +++++       +     + +        +           + +L  
Sbjct: 18  LPARIVGILIAFLLVTLIFAYAFHSLQYHWGWESVYAYRQKFVNGWLMTLAISAAALLLS 77

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +     T L++       + L  +Y+ T  I G P LV I + + +  D           
Sbjct: 78  LAIGLCTALTQRSRLLPLRYLGRIYVET--IRGTPLLVQILVFFYVVADA---------- 125

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
              V   ++   I LS +  A+I+E++R+G+ +V   QME+A A+GLT  +  R V+ PQ
Sbjct: 126 -FGVGDRYLVGVITLSLFAGAYISEMIRAGIESVGDSQMESARAIGLTRAQIYRYVVFPQ 184

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R  +PPL  Q+ +++K+SSL   +  ++       +   T   +E  L     YL+++
Sbjct: 185 AFRQTLPPLAGQFASIVKDSSLLSIIAVSEFTLNAQEVNAFTYSTLESYLPLAIGYLAIT 244

Query: 379 IMIALFMNRLNAKIA 393
           + I+L   RL  K  
Sbjct: 245 LPISLLSRRLEKKFR 259



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 4/114 (3%)

Query: 52  MEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS----SYATAILVGFVNTFWLAFSGMIPA 107
           +    + + I FL     F      + Y        +Y    + G++ T  ++ + ++ +
Sbjct: 18  LPARIVGILIAFLLVTLIFAYAFHSLQYHWGWESVYAYRQKFVNGWLMTLAISAAALLLS 77

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
             IG      + S    + ++ R+YVE  R  P LV I   +  V     + D 
Sbjct: 78  LAIGLCTALTQRSRLLPLRYLGRIYVETIRGTPLLVQILVFFYVVADAFGVGDR 131


>gi|15900516|ref|NP_345120.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15902577|ref|NP_358127.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|111656913|ref|ZP_01407737.1| hypothetical protein SpneT_02001840 [Streptococcus pneumoniae
           TIGR4]
 gi|116515469|ref|YP_816031.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|14972083|gb|AAK74760.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15458108|gb|AAK99337.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116076045|gb|ABJ53765.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
          Length = 225

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + V SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAVGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAVGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|325523104|gb|EGD01507.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 257

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 101/227 (44%), Gaps = 14/227 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F + +  R   F         ++ + S    I+L L A  + R    +        Y
Sbjct: 1   MQEFFLHMIPRYFPFLLKGAWITIELSLISMTGAILLGL-AVAIGRLSPRRWIAWPLQCY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +    +P +V + + Y           F         P F +  + LS    A+++E
Sbjct: 60  VEIW--RDVPLVVQLLVIY-----------FTLPQIGLTLPGFWAGVLGLSLNLGAYLSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R+ + ++  GQ EA + +G+++    R V+LPQAM+  +P +   +++L+K+SSL   
Sbjct: 107 VFRAAIQSIDHGQREAGMTIGMSNAMIYRRVILPQAMKVALPTVGGYFISLMKDSSLVSF 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +   +L+  G  II +T  ++++ L+   IY ++S   A  +  +  
Sbjct: 167 IAVNELLRHGTIIIAETFMSMQVYLMVAIIYFAMSFAAARGVRWIER 213



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 43/89 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G   T  L+   M  A ++G  V  GRLS  + +AW  + YVE++R++P +V
Sbjct: 11  RYFPFLLKGAWITIELSLISMTGAILLGLAVAIGRLSPRRWIAWPLQCYVEIWRDVPLVV 70

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +  +Y ++  +            G+ LN
Sbjct: 71  QLLVIYFTLPQIGLTLPGFWAGVLGLSLN 99


>gi|324009100|gb|EGB78319.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
          Length = 347

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 77/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFIYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PLVV + +Y   L +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLVVWWLMYGGFLGLDRVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|304395813|ref|ZP_07377696.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357107|gb|EFM21471.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 219

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    +            I V   V G+ + L A   +R +       + L++I
Sbjct: 1   MEFDWSVIWPAMPALLEGAKLTLIISVIGLVGGLFIGLIAG-FARAYGGWITNNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPMAFP------DLRIDPFSAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINKGFREAGLALGLSSRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + R+  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSFVLRRIEKRVKI 218



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++       A+L G   T  ++  G++    IG + G  R     +   I  V++E+ R
Sbjct: 4   DWSVIWPAMPALLEGAKLTLIISVIGLVGGLFIGLIAGFARAYGGWITNNIALVFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P +V + F+Y ++    P 
Sbjct: 64  GTPIVVQVMFIYFALPMAFPD 84


>gi|194016112|ref|ZP_03054727.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Bacillus pumilus ATCC 7061]
 gi|194012467|gb|EDW22034.1| glutamine-binding periplasmic protein/glutamine transport system
           permease protein [Bacillus pumilus ATCC 7061]
          Length = 225

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 14/218 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
             F    +     I   S   G +L  F   L+R  +         LYIS   + G+P L
Sbjct: 19  FPFVMKGIWLTLLISFVSMFFGTILGFFI-ALARMANTWMLWLPARLYISF--MRGVPIL 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ + Y           F F           +  I  S  +AA+IAEI R+ L +VP G
Sbjct: 76  VILFILY-----------FGFPYIGIEFTAVTAAIIGFSFNSAAYIAEINRAALSSVPSG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA +LGL++ +  R V+LPQ++R  +PPLT+  L+L+K SSLA  +   +L      
Sbjct: 125 QVEAAKSLGLSYWQTMRGVILPQSVRIALPPLTNVMLDLIKASSLAAMITVPELFQQAKI 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  +    + + ++   IY  +  +++L  + L    A
Sbjct: 185 VGGREFDYMTMYILVALIYWGICSVVSLLQDFLEKHYA 222



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  ++F  M   TI+G  +   R++   ++    R+Y+   R +P LV++F LY
Sbjct: 23  MKGIWLTLLISFVSMFFGTILGFFIALARMANTWMLWLPARLYISFMRGVPILVILFILY 82

Query: 150 KSVLSVLPIPDHSIVLPFGMFLN 172
                +            G   N
Sbjct: 83  FGFPYIGIEFTAVTAAIIGFSFN 105


>gi|165976777|ref|YP_001652370.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|307257419|ref|ZP_07539188.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|165876878|gb|ABY69926.1| arginine transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|306864071|gb|EFM95985.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 223

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L         K      +   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETSKQPCISKPTS---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEK----ITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEKRFTRFER 220


>gi|33591319|ref|NP_878963.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
 gi|33570961|emb|CAE40433.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
          Length = 229

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 7/216 (3%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 M    K+   S  +G+ L      + R    K   A+   Y++     GL  L 
Sbjct: 15  YLFRDGMVFTLKLTFLSTAMGLALGTLL-AMCRLSGIKPLSAVAAAYVN-----GLRALP 68

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           LI + +  +F  P +G +    G  +    F S  I  + + AA+  EI+R+G+ ++PRG
Sbjct: 69  LILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEAAYFCEIMRAGIQSIPRG 128

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA A+GL + +    V+LPQA+R++ P L +Q + L +++SL   +   D +  G  
Sbjct: 129 QTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDTSLVYVLSLTDFLGAGIN 188

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  +  + +E+ L    +Y  +S   + F++ L  +
Sbjct: 189 VAQRDNRLVEMYLFVAAVYFVMSFAASRFVHYLQQR 224



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 31/67 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L F        +GTL+   RLS  K ++ +   YV   R +P ++VIF+ Y  
Sbjct: 20  GMVFTLKLTFLSTAMGLALGTLLAMCRLSGIKPLSAVAAAYVNGLRALPLILVIFWFYFL 79

Query: 152 VLSVLPI 158
           V  +   
Sbjct: 80  VPYIGGW 86


>gi|330807874|ref|YP_004352336.1| histidine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375982|gb|AEA67332.1| histidine ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 242

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 2/191 (1%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    K  +    LY  T LI G+P LVL+ L +                       F 
Sbjct: 51  AKLSSVKLLRIPAQLY--TTLIRGVPDLVLMLLIFYSLQTWLTSLTDFMEWEYIEIDPFG 108

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L     A+  E  R  ++AVPRGQ+EAA A GL   +  R V+ PQ MR  +P +
Sbjct: 109 AGVITLGFIYGAYFTETFRGAILAVPRGQVEAATAYGLKRGQRFRFVVFPQMMRFALPGI 168

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + ++ +LK ++L   +G ADLV         T Q    +++   IYL ++      +  
Sbjct: 169 GNNWMVMLKATALVSIIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFILRW 228

Query: 388 LNAKIALKEKK 398
           L  + A   ++
Sbjct: 229 LERRYAAGARE 239


>gi|119387392|ref|YP_918426.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119377967|gb|ABL72730.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 214

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 14/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + +++          + +  FV G VL L    L+R  + K  +    L +    I G+P
Sbjct: 7   QQIAYIFQGAGWTIILSLLGFVGGTVLGL-PIALARSSNSKALRVASSLLVQF--IQGVP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V++ + Y           F    G    P  ++  +A++ Y+ A++ EI +  + AVP
Sbjct: 64  LPVIMFVVY-----------FGISIGGFEVPALVAAGLAMTLYSGAYLGEIWKGCIQAVP 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           + Q EAA  L LT  +    V+LPQA+R  IPP     + ++KN+S AV + F DL    
Sbjct: 113 KTQWEAAECLALTPAQRFVYVVLPQALRIAIPPTVGFMVQIVKNTSYAVVINFFDLTYSA 172

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             I N T     +  +   IY ++   +++   R   K+   
Sbjct: 173 KVINNSTFMPFTVFTLAAAIYFAICFPMSVLAQRYERKLHRS 214



 Score = 39.5 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I  G   T  L+  G +  T++G  +   R S +K +     + V+  + +P  V++F 
Sbjct: 11  YIFQGAGWTIILSLLGFVGGTVLGLPIALARSSNSKALRVASSLLVQFIQGVPLPVIMFV 70

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +Y  +          +     M L +             A
Sbjct: 71  VYFGISIGGFEVPALVAAGLAMTLYSGAYLGEIWKGCIQA 110


>gi|325062201|gb|ADY65891.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 219

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 14/226 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                F    +     + + + + G ++  F   L+R    K  +     YI   +I G+
Sbjct: 8   WNEFGFLLTALQWTVLLTIIALIGGGLVGFFV-ALARTSDLKALRIAAGTYIQ--VIQGI 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+++ L Y                     P  ++   +++ YT+ ++AEI R  + AV
Sbjct: 65  PVLMILFLSYY-----------GLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQAV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q EA+ +L LT  +  R V+LPQA+R  +PP     + ++KN+S+A  +GF +L   
Sbjct: 114 PKQQWEASESLALTRAQQYRYVILPQAIRISLPPTVGFAVQVVKNTSIASIIGFVELARA 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  I N T Q   + +    +Y  +   ++     L  ++     +
Sbjct: 174 GQLINNATFQPFRVFVAVAVLYFIVCYPLSQLSRWLERRLHAGSNR 219



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 33/99 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L    +I   ++G  V   R S  K +      Y++V + IP L+++F  
Sbjct: 14  LLTALQWTVLLTIIALIGGGLVGFFVALARTSDLKALRIAAGTYIQVIQGIPVLMILFLS 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +          I     M +   G           A
Sbjct: 74  YYGLSLAGLELPPLIAAGASMTIYTSGYLAEIWRGCIQA 112


>gi|296156899|ref|ZP_06839736.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295892785|gb|EFG72566.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 567

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 13/182 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    KT  +    YI    + G P L+ +       FD   L    F        E  +
Sbjct: 80  RLSRFKTLNSAAWGYIWF--VRGTPQLLQLVFI----FDALPLIGLRF-------DEVTT 126

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I  +   AAF AE+ R+G+++V R Q  AA ALG+      R ++LPQ+MR++IP L 
Sbjct: 127 AVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLRRIILPQSMRAVIPGLA 186

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  + +LK +S+A  +   +L      ++ Q  +   +      IYL L+  I+L    L
Sbjct: 187 NDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFGAAAVIYLFLTSGISLLQVWL 246

Query: 389 NA 390
             
Sbjct: 247 ER 248



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G      +    M    ++G  +   RLS  K +      Y+   R  P L+ + F+
Sbjct: 51  LLGGAWIAVKITLIAMSIGLVLGLGLALMRLSRFKTLNSAAWGYIWFVRGTPQLLQLVFI 110

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  +    D       G  LN    S         +     S     +       L 
Sbjct: 111 FDALPLIGLRFDEVTTAVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLR 170

Query: 209 RHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R    ++ +A +P L   T  +  L ++  +    +L F    +   NF   +       
Sbjct: 171 RIILPQSMRAVIPGLANDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFG---A 227

Query: 268 SLYIALSC 275
           +  I L  
Sbjct: 228 AAVIYLFL 235


>gi|307706135|ref|ZP_07642954.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307618535|gb|EFN97683.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
          Length = 225

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y SL   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|289704647|ref|ZP_06501075.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289558601|gb|EFD51864.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 276

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 21/226 (9%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
              N  L     T+      FV   + GIVL+L      R       + L   Y+  F  
Sbjct: 62  MFPNVILVGLGNTLFYTVTSFVVGLLGGIVLALM-----RLSSFGPYRWLATAYVEFFR- 115

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                LV +A  Y + F                 P  + +  AL   +AA+IAE +R+GL
Sbjct: 116 GVPALLVFLAFGYGVPFAF-----------GVSWPIPVVVMAALGMVSAAYIAETLRAGL 164

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-- 347
            AVPRGQMEAA +LG+   +A   +++PQA R ++PPLT++ + L K+SSL   +G A  
Sbjct: 165 QAVPRGQMEAARSLGMPTWRAMVTIVIPQAFRIVLPPLTNEVILLTKDSSLVYVLGLAAH 224

Query: 348 --DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L   G   I+     +  IL+    YL +++ ++L   R  A+
Sbjct: 225 EYELTKFGRDGISALDAGMTPILVAGLFYLVITVPLSLLARRFEAR 270



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ILVG  NT +   +  +   + G ++   RLS+     W+   YVE FR +P L+V   
Sbjct: 66  VILVGLGNTLFYTVTSFVVGLLGGIVLALMRLSSFGPYRWLATAYVEFFRGVPALLVFLA 125

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
               V     +     V+  
Sbjct: 126 FGYGVPFAFGVSWPIPVVVM 145


>gi|310767115|gb|ADP12065.1| glutamine ABC transporter, permease protein [Erwinia sp. Ejp617]
          Length = 219

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 112/230 (48%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V   V G+++ L A   +R +     + + L++I
Sbjct: 1   MQFDWSAIWPAIPILLEGARMTLLISVLGLVGGVIIGLIAG-FARAYGGWLSRNIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIVVQVMFIY---FALPMAFT------DLRIDPFSAAVVTIIINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ RG  EA +ALGL+ R+  R V++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSINRGFREAGLALGLSGRETLRYVIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVLRRLERRMKI 218



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T  ++  G++   IIG + G  R     L   I  V++E+ R
Sbjct: 4   DWSAIWPAIPILLEGARMTLLISVLGLVGGVIIGLIAGFARAYGGWLSRNIALVFIELIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|206974269|ref|ZP_03235186.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus H3081.97]
 gi|217957949|ref|YP_002336493.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus AH187]
 gi|229137212|ref|ZP_04265829.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST26]
 gi|206747509|gb|EDZ58899.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus H3081.97]
 gi|217064262|gb|ACJ78512.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus cereus AH187]
 gi|228646207|gb|EEL02424.1| Amino acid ABC transproter, permease [Bacillus cereus BDRD-ST26]
          Length = 230

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 14/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K   ++  +YI   +I G P +V IA+ Y              I    V   F +
Sbjct: 41  RISNNKVLNSIAHVYI--AIIRGTPLIVQIAILY------------FGITSVVVFTPFWA 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL+ +  A+I EI R  + +V RGQMEAA +LG+ +  A R ++LPQA R  IPPL 
Sbjct: 87  GAIALAIHNGAYITEIFRGSIQSVDRGQMEAARSLGMPYPLAMRRIVLPQAFRQSIPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  LK+SSL   VG ++L   G +I     Q ++  +I    YL L ++    +N L
Sbjct: 147 NQFIIGLKDSSLVAYVGLSELWGSGLSIAAGNFQQLDTYIIVGLYYLVLVLLFTYLVNLL 206

Query: 389 NAKIALKE 396
             ++  KE
Sbjct: 207 EKRLQRKE 214


>gi|78356476|ref|YP_387925.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218881|gb|ABB38230.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 230

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 18/229 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    L++  +    + +F LG+ L L   RLS+ +  +                
Sbjct: 18  YPEGPLGGIALSIVLSLGGILGAFWLGLALGLM--RLSKRWPVR---------------L 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                + I     L            +      PE     I    +T+A+IAEIVR+G++
Sbjct: 61  PAVLFIEIIRGTPLLLLLFWFYFLAPVVLGQTLPEVECALITFVVFTSAYIAEIVRAGVL 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQMEAA   GLT  +A R V+LPQA+R++IP   +Q+++L K++SLA  +G A+L 
Sbjct: 121 ALPQGQMEAARGTGLTKLQAMRFVILPQALRNMIPSFVNQFVSLTKDTSLAYVIGVAELT 180

Query: 351 SVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                + N+T    +EI    + +Y  +   +     RL  ++   + +
Sbjct: 181 RAAVQVNNRTLSAPMEIYFTILVMYFLICYALTSASRRLEKQMKRYQAR 229



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            + +    + Y    SY    L G   +  L+  G++ A  +G  +G  RLS    V   
Sbjct: 2   QWNVVWDNLDYLLIGSYPEGPLGGIALSIVLSLGGILGAFWLGLALGLMRLSKRWPVRLP 61

Query: 129 CRVYVEVFRNIP 140
             +++E+ R  P
Sbjct: 62  AVLFIEIIRGTP 73


>gi|27378421|ref|NP_769950.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351569|dbj|BAC48575.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 243

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 14/225 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N     F    +     + V + + G++L      L R             YI  F   
Sbjct: 10  VNYFFNYFLMKGVLVTIGLTVAAVIGGLILG-MGIALMRMSSNPVLSGASRFYIWFF--R 66

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + Y      P LG    +             + L    AA++AEIVRSG +
Sbjct: 67  GTPLLIQLVVIYS---GLPQLGIKFSV--------ITCALVGLILNEAAYLAEIVRSGFM 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ EAA AL L+     R V LPQA R +IPPL +   +LLK +SLA  +   +L+
Sbjct: 116 AVSAGQREAAWALSLSPWVTFRRVTLPQAFRLMIPPLGNSINSLLKATSLASVISVEELM 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                ++ +  Q +E+       YL L+ +      RL       
Sbjct: 176 RRSDMLMQEHFQILEVYAAATAYYLILTSVWDAVQRRLEKHFGRS 220



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  L  + +I   I+G  +   R+S+N +++   R Y+  FR  P L+ +  +
Sbjct: 18  LMKGVLVTIGLTVAAVIGGLILGMGIALMRMSSNPVLSGASRFYIWFFRGTPLLIQLVVI 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +            G+ LN        +     A
Sbjct: 78  YSGLPQLGIKFSVITCALVGLILNEAAYLAEIVRSGFMA 116


>gi|261213265|ref|ZP_05927547.1| amino acid ABC transproter permease protein [Vibrio sp. RC341]
 gi|260837539|gb|EEX64242.1| amino acid ABC transproter permease protein [Vibrio sp. RC341]
          Length = 223

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+L    + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALILANI-RVFKVPVLDPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQIFPLLVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQAARVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTLEMASWGLVFALILALILANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  + P
Sbjct: 75  YYGLPQIFP 83


>gi|116248726|ref|YP_764567.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253376|emb|CAK11764.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 219

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 12/227 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTF 227
           M  +   +     T+    KI + + +LG  ++ +    L+             +   + 
Sbjct: 1   MEWDWDFVWQIMPTLLEGFKITLLATILGAAVAMIVGLALAIARRSPVAGVSRTVGFVSE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV +   + +  D                   ++  I +  + A + AE+ R+
Sbjct: 61  FIRGTPLLVQLYFIFYVLPDI-----------GIRLAPLVAGVIGMGIHYATYTAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VPRGQ EAA A  L+ R+A   V+LPQA+  +IP L + ++ + K + L  A+   
Sbjct: 110 GIENVPRGQWEAAKATNLSTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L++   +I N   + IE + +    +L +S++  + +  L  + A 
Sbjct: 170 ELMNQAKSIANSNYRYIEPMTLVGIFFLVISLISVVGLRWLEERYAR 216



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         +L GF  T      G   A I+G  +   R S    V+       E  R
Sbjct: 4   DWDFVWQIMPTLLEGFKITLLATILGAAVAMIVGLALAIARRSPVAGVSRTVGFVSEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P LV ++F++  +  +   
Sbjct: 64  GTPLLVQLYFIFYVLPDIGIR 84


>gi|326796876|ref|YP_004314696.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326547640|gb|ADZ92860.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 270

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 6/261 (2%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P  ++  +   +L    I            L+   L+   +T    +   +    + +  
Sbjct: 12  PWWLVATIALFLLLGWHIIADESYQKIANTLSQGLLTTVGVTFAAFSIASIAGLFIALA- 70

Query: 201 SLFATRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
                R+ R    F+ +  + +P+L +  ++ F       I   Y      P+   +   
Sbjct: 71  GFSRHRIVREMSRFYIEIIRGVPVLVLLFYIAFVGA--PEIIKLYNWSLQYPIEQGWLEK 128

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             +           ALS   +AFIAE+ R+G+  V +GQ+EAA ALGL+  +  RL++LP
Sbjct: 129 ARTRDFTLLWRAIFALSISYSAFIAEVFRAGIQEVSKGQIEAAQALGLSGWQRFRLIILP 188

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QAMR I+PPL + ++ ++K+S+L   +G  D+  +G      T Q  E   +  F+YL L
Sbjct: 189 QAMRKILPPLGNDFVAMIKDSALVSVLGVQDITQLGKVYSASTFQFFETYNVVAFMYLVL 248

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           ++ ++L +      +   +++
Sbjct: 249 TLGLSLLIRGFEYYLRRHDRQ 269



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 1/123 (0%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +   I+   S    A  +  G + T  + F+    A+I G  +     S +++V  + R 
Sbjct: 25  LGWHIIADESYQKIANTLSQGLLTTVGVTFAAFSIASIAGLFIALAGFSRHRIVREMSRF 84

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y+E+ R +P LV++F++     +   I  ++  L + +       +           IF 
Sbjct: 85  YIEIIRGVPVLVLLFYIAFVG-APEIIKLYNWSLQYPIEQGWLEKARTRDFTLLWRAIFA 143

Query: 192 FSF 194
            S 
Sbjct: 144 LSI 146


>gi|256157635|ref|ZP_05455553.1| amino acid ABC transporter, permease protein [Brucella ceti
           M490/95/1]
 gi|256253390|ref|ZP_05458926.1| amino acid ABC transporter, permease protein [Brucella ceti B1/94]
          Length = 226

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 44  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 91  AALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 151 SNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 210

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 211 LERRFGRY 218



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 9   ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 69  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 99


>gi|330955285|gb|EGH55545.1| amino acid ABC transporter ATP-binding protein [Pseudomonas
           syringae Cit 7]
          Length = 349

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 7/164 (4%)

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVL+   Y L        Q      S +S  F S  IAL     A++AEI R GL++V 
Sbjct: 1   MLVLLVFVYNLP-------QLFPASSSVLSQPFYSGLIALVLTETAYMAEIHRGGLLSVL 53

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA ALG+    A RLV++PQA+R  +P LT++Y+ ++K +SL   +   +L+ VG
Sbjct: 54  KGQREAARALGIRGLGAQRLVVIPQAIRISLPTLTNEYVTIVKLTSLVSVISLNELLLVG 113

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +  Q    +E +      Y+ +  +    +      + L  K
Sbjct: 114 QRLYAQNFLVLETLAAVAMYYVLIVTLFGWLLQWAERHLDLSRK 157


>gi|324991750|gb|EGC23682.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 286

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 16/268 (5%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV   +   ++    Y+  L  +P       L          L    +T+   A   VF 
Sbjct: 15  EVIIVVTTYLLTTGWYEEFLKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFG 73

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251
            +L +V ++      +  +       P+       + G P LV + L Y   F  P+L  
Sbjct: 74  ILLAMVFAIVKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLK 123

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               ++         P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T++
Sbjct: 124 AINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNK 183

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++P A     P L +  + L K +SLA + G  ++ +    I     +  E  +
Sbjct: 184 QVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFI 243

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               IY +++I+I      +   + +K+
Sbjct: 244 SVSLIYWAVNILIEQLGRWIERMMDIKQ 271


>gi|330815543|ref|YP_004359248.1| Glutamate/aspartate transport system permease protein [Burkholderia
           gladioli BSR3]
 gi|327367936|gb|AEA59292.1| Glutamate/aspartate transport system permease protein [Burkholderia
           gladioli BSR3]
          Length = 225

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 64/219 (29%), Positives = 109/219 (49%), Gaps = 6/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           +I + + V+GIV       L R    K  +    LY++ F       L
Sbjct: 13  LPSLWTGAIVTLQITLLAIVVGIVWGTLL-ALMRLSGVKPLQWFSRLYVTVFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P + Q       T+     S  IA S + AA+ +EI+R+G+ AVPRG
Sbjct: 69  VMVLLWFFL--IVPQVLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ AA ALG+++ +A RLV+LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNAAFALGMSYGQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G ++E++L     Y  + ++ +  +  L  K+  
Sbjct: 187 IGDRDGTSVEMVLFAGACYFVVCVLASALVKGLQKKVTR 225



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +    ++   + GTL+   RLS  K + W  R+YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAIVTLQITLLAIVVGIVWGTLLALMRLSGVKPLQWFSRLYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|222109051|ref|YP_002551317.1| ABC transporter membrane spanning protein (opine) [Agrobacterium
           radiobacter K84]
 gi|221727973|gb|ACM31023.1| ABC transporter membrane spanning protein (opine) [Agrobacterium
           radiobacter K84]
          Length = 241

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 4/202 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +   S ++G V+S+    L R    +   ++   Y+  +LI   P LV + L Y 
Sbjct: 18  PTTLALAFISLLIGFVVSV-PVALMRLSKNRIVSSVAYGYV--YLIRSTPLLVQMFLIYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                        +  S   P F    +AL+  TAA+ +EI+R G+ AVP GQ+EAA A+
Sbjct: 75  GSAQFRGFLTEIGLWSSFREPWF-CAILALALNTAAYTSEIIRGGIQAVPLGQIEAARAV 133

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++     R ++ P A+R  +P   ++ + ++K++SLA  +   ++  +   II+ T   
Sbjct: 134 GMSTVLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGLAKQIISATYSP 193

Query: 364 IEIILIWMFIYLSLSIMIALFM 385
           +E+ ++   IYL ++ +++  +
Sbjct: 194 VEVFIVAGAIYLFITFIVSRLV 215



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 39/113 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++     T  LAF  ++   ++   V   RLS N++V+ +   YV + R+ P LV +F +
Sbjct: 13  LIAAVPTTLALAFISLLIGFVVSVPVALMRLSKNRIVSSVAYGYVYLIRSTPLLVQMFLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y              +           +    L         +   +  + L 
Sbjct: 73  YYGSAQFRGFLTEIGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQAVPLG 125


>gi|33592313|ref|NP_879957.1| amino acids ABC transporter, permease protein [Bordetella pertussis
           Tohama I]
 gi|33596426|ref|NP_884069.1| amino acids ABC transporter, permease protein [Bordetella
           parapertussis 12822]
 gi|33602283|ref|NP_889843.1| amino acids ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
 gi|33566195|emb|CAE37101.1| amino acids ABC transporter, permease protein [Bordetella
           parapertussis]
 gi|33571958|emb|CAE41479.1| amino acids ABC transporter, permease protein [Bordetella pertussis
           Tohama I]
 gi|33576722|emb|CAE33800.1| amino acids ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
          Length = 229

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 7/228 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            FL+   LS     M T  ++F+ ++VL   L++    + R  +    +     Y+    
Sbjct: 2   FFLDAHYLSQLADGMMTTVQLFLVAWVLAFTLAVLLVVI-RTTNLAPCRWFVDAYVE--Y 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRS 287
              +P LV +   Y   F  P L      G       E     IAL   +AA+IAE +RS
Sbjct: 59  HRNVPLLVQVLFWY---FGMPELLPEGVRGWLYQHNAELSLAAIALGLGSAAYIAEDIRS 115

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL A+P  Q EAA ALG ++ +  R V++PQA+R  IPPL  + L L KN+S+A+A+G  
Sbjct: 116 GLRAIPGTQFEAARALGSSYLQCMRHVIVPQALRISIPPLVGRALLLFKNTSVAMAIGVV 175

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      I N+T +          +YL  S ++    +R+ A+  + 
Sbjct: 176 ELTYQAREIENETYRTFATFGAATLMYLLGSFLLMFIGSRVYARYNIG 223



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 32/82 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  G + T  L     + A  +  L+   R +      W    YVE  RN+P LV 
Sbjct: 8   YLSQLADGMMTTVQLFLVAWVLAFTLAVLLVVIRTTNLAPCRWFVDAYVEYHRNVPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           + F Y  +  +LP      +  
Sbjct: 68  VLFWYFGMPELLPEGVRGWLYQ 89


>gi|15832445|ref|NP_311218.1| histidine transport system membrane protein M [Escherichia coli
           O157:H7 str. Sakai]
 gi|16130242|ref|NP_416810.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24113679|ref|NP_708189.1| histidine transport, membrane protein M [Shigella flexneri 2a str.
           301]
 gi|26248695|ref|NP_754735.1| histidine transport system permease hisM [Escherichia coli CFT073]
 gi|30063733|ref|NP_837904.1| histidine transport, membrane protein M [Shigella flexneri 2a str.
           2457T]
 gi|74312824|ref|YP_311243.1| histidine transport, membrane protein M [Shigella sonnei Ss046]
 gi|82777718|ref|YP_404067.1| histidine transport, membrane protein M [Shigella dysenteriae
           Sd197]
 gi|89109127|ref|AP_002907.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. W3110]
 gi|91211603|ref|YP_541589.1| histidine transport system membrane protein M [Escherichia coli
           UTI89]
 gi|110642511|ref|YP_670241.1| histidine transport system permease protein HisM [Escherichia coli
           536]
 gi|110806270|ref|YP_689790.1| histidine transport, membrane protein M [Shigella flexneri 5 str.
           8401]
 gi|117624497|ref|YP_853410.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli APEC O1]
 gi|157156249|ref|YP_001463651.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E24377A]
 gi|168748159|ref|ZP_02773181.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4113]
 gi|168755062|ref|ZP_02780069.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761252|ref|ZP_02786259.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767936|ref|ZP_02792943.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4486]
 gi|168772964|ref|ZP_02797971.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4196]
 gi|168780165|ref|ZP_02805172.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787217|ref|ZP_02812224.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC869]
 gi|168798480|ref|ZP_02823487.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC508]
 gi|170019384|ref|YP_001724338.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170081923|ref|YP_001731243.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|170679628|ref|YP_001744507.1| histidine ABC transporter permease HisM [Escherichia coli SMS-3-5]
 gi|187732602|ref|YP_001881129.1| histidine ABC transporter permease HisM [Shigella boydii CDC
           3083-94]
 gi|188494599|ref|ZP_03001869.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           53638]
 gi|191169482|ref|ZP_03031216.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           B7A]
 gi|191170271|ref|ZP_03031825.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           F11]
 gi|193062340|ref|ZP_03043435.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E22]
 gi|193068168|ref|ZP_03049132.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E110019]
 gi|194429438|ref|ZP_03061961.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           B171]
 gi|194436125|ref|ZP_03068227.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           101-1]
 gi|195935686|ref|ZP_03081068.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli O157:H7 str. EC4024]
 gi|208808672|ref|ZP_03251009.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4206]
 gi|208814472|ref|ZP_03255801.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820495|ref|ZP_03260815.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398320|ref|YP_002271716.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4115]
 gi|209919807|ref|YP_002293891.1| histidine ABC transporter permease [Escherichia coli SE11]
 gi|215487520|ref|YP_002329951.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217327682|ref|ZP_03443765.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. TW14588]
 gi|218554863|ref|YP_002387776.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli IAI1]
 gi|218559220|ref|YP_002392133.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli S88]
 gi|218690467|ref|YP_002398679.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli ED1a]
 gi|218695906|ref|YP_002403573.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli 55989]
 gi|218700783|ref|YP_002408412.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli IAI39]
 gi|227887365|ref|ZP_04005170.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein HisM [Escherichia coli 83972]
 gi|237704784|ref|ZP_04535265.1| histidine transport system membrane protein M [Escherichia sp.
           3_2_53FAA]
 gi|238901482|ref|YP_002927278.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|253772769|ref|YP_003035600.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162316|ref|YP_003045424.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|254794200|ref|YP_003079037.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|256017535|ref|ZP_05431400.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Shigella sp. D9]
 gi|256022008|ref|ZP_05435873.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia sp.
           4_1_40B]
 gi|260844894|ref|YP_003222672.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O103:H2 str. 12009]
 gi|260856351|ref|YP_003230242.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O26:H11 str. 11368]
 gi|260869029|ref|YP_003235431.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O111:H- str. 11128]
 gi|261223238|ref|ZP_05937519.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259212|ref|ZP_05951745.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283548|ref|YP_003500366.1| Histidine transport system permease protein hisM [Escherichia coli
           O55:H7 str. CB9615]
 gi|293415599|ref|ZP_06658242.1| histidine transport system permease hisM [Escherichia coli B185]
 gi|293446644|ref|ZP_06663066.1| histidine transport system permease hisM [Escherichia coli B088]
 gi|297520316|ref|ZP_06938702.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           OP50]
 gi|300818090|ref|ZP_07098302.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300822181|ref|ZP_07102323.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300903697|ref|ZP_07121612.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300918521|ref|ZP_07135114.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300924576|ref|ZP_07140538.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300931335|ref|ZP_07146667.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300948544|ref|ZP_07162638.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300956425|ref|ZP_07168716.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300980891|ref|ZP_07175237.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300983440|ref|ZP_07176589.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301023554|ref|ZP_07187318.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301024138|ref|ZP_07187848.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|301049065|ref|ZP_07196049.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|301303231|ref|ZP_07209356.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301328808|ref|ZP_07221853.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301647590|ref|ZP_07247387.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306814581|ref|ZP_07448743.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           NC101]
 gi|307138972|ref|ZP_07498328.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           H736]
 gi|307311132|ref|ZP_07590776.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309784983|ref|ZP_07679616.1| histidine transport system permease protein hisM [Shigella
           dysenteriae 1617]
 gi|309793190|ref|ZP_07687618.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|312967607|ref|ZP_07781822.1| histidine transport system permease protein hisM [Escherichia coli
           2362-75]
 gi|312973433|ref|ZP_07787605.1| histidine transport system permease protein hisM [Escherichia coli
           1827-70]
 gi|331642946|ref|ZP_08344081.1| histidine transport system permease protein HisM [Escherichia coli
           H736]
 gi|331647962|ref|ZP_08349054.1| histidine transport system permease protein HisM [Escherichia coli
           M605]
 gi|331653750|ref|ZP_08354751.1| histidine transport system permease protein HisM [Escherichia coli
           M718]
 gi|331669006|ref|ZP_08369854.1| histidine transport system permease protein HisM [Escherichia coli
           TA271]
 gi|331678253|ref|ZP_08378928.1| histidine transport system permease protein HisM [Escherichia coli
           H591]
 gi|331683978|ref|ZP_08384574.1| histidine transport system permease protein HisM [Escherichia coli
           H299]
 gi|84028921|sp|P0AEU5|HISM_ECO57 RecName: Full=Histidine transport system permease protein hisM
 gi|84028922|sp|P0AEU4|HISM_ECOL6 RecName: Full=Histidine transport system permease protein hisM
 gi|84028923|sp|P0AEU3|HISM_ECOLI RecName: Full=Histidine transport system permease protein hisM
 gi|84028924|sp|P0AEU6|HISM_SHIFL RecName: Full=Histidine transport system permease protein hisM
 gi|26109100|gb|AAN81303.1|AE016763_262 Histidine transport system permease protein hisM [Escherichia coli
           CFT073]
 gi|1788645|gb|AAC75367.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1799688|dbj|BAA16153.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K12 substr. W3110]
 gi|13362661|dbj|BAB36614.1| histidine transport system membrane protein M [Escherichia coli
           O157:H7 str. Sakai]
 gi|24052745|gb|AAN43896.1| histidine transport, membrane protein M [Shigella flexneri 2a str.
           301]
 gi|30041988|gb|AAP17714.1| histidine transport, membrane protein M [Shigella flexneri 2a str.
           2457T]
 gi|73856301|gb|AAZ89008.1| histidine transport, membrane protein M [Shigella sonnei Ss046]
 gi|81241866|gb|ABB62576.1| histidine transport, membrane protein M [Shigella dysenteriae
           Sd197]
 gi|91073177|gb|ABE08058.1| histidine transport system membrane protein M [Escherichia coli
           UTI89]
 gi|110344103|gb|ABG70340.1| histidine transport system permease protein HisM [Escherichia coli
           536]
 gi|110615818|gb|ABF04485.1| histidine transport, membrane protein M [Shigella flexneri 5 str.
           8401]
 gi|115513621|gb|ABJ01696.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli APEC O1]
 gi|157078279|gb|ABV17987.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E24377A]
 gi|169754312|gb|ACA77011.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169889758|gb|ACB03465.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|170517346|gb|ACB15524.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           SMS-3-5]
 gi|187429594|gb|ACD08868.1| histidine ABC transporter, permease protein HisM [Shigella boydii
           CDC 3083-94]
 gi|187771251|gb|EDU35095.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4196]
 gi|188017304|gb|EDU55426.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4113]
 gi|188489798|gb|EDU64901.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           53638]
 gi|189001981|gb|EDU70967.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4076]
 gi|189357678|gb|EDU76097.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363002|gb|EDU81421.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4486]
 gi|189368323|gb|EDU86739.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4501]
 gi|189372783|gb|EDU91199.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC869]
 gi|189378914|gb|EDU97330.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC508]
 gi|190900484|gb|EDV60299.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           B7A]
 gi|190909787|gb|EDV69372.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           F11]
 gi|192932006|gb|EDV84605.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E22]
 gi|192958447|gb|EDV88886.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           E110019]
 gi|194412499|gb|EDX28798.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           B171]
 gi|194424853|gb|EDX40838.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           101-1]
 gi|195183046|dbj|BAG66606.1| arginine transporter subunit [Escherichia coli O111:H-]
 gi|208728473|gb|EDZ78074.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4206]
 gi|208735749|gb|EDZ84436.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4045]
 gi|208740618|gb|EDZ88300.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4042]
 gi|209159720|gb|ACI37153.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC4115]
 gi|209764898|gb|ACI80761.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209764900|gb|ACI80762.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209764902|gb|ACI80763.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209764904|gb|ACI80764.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209764906|gb|ACI80765.1| histidine transport system membrane protein M [Escherichia coli]
 gi|209913066|dbj|BAG78140.1| histidine ABC transporter permease component [Escherichia coli
           SE11]
 gi|215265592|emb|CAS09995.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O127:H6 str. E2348/69]
 gi|217320049|gb|EEC28474.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. TW14588]
 gi|218352638|emb|CAU98419.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli 55989]
 gi|218361631|emb|CAQ99225.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli IAI1]
 gi|218365989|emb|CAR03733.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli S88]
 gi|218370769|emb|CAR18582.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli IAI39]
 gi|218428031|emb|CAR08951.2| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli ED1a]
 gi|222034063|emb|CAP76804.1| Histidine transport system permease protein hisM [Escherichia coli
           LF82]
 gi|226901150|gb|EEH87409.1| histidine transport system membrane protein M [Escherichia sp.
           3_2_53FAA]
 gi|227835715|gb|EEJ46181.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein HisM [Escherichia coli 83972]
 gi|238861421|gb|ACR63419.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|242377940|emb|CAQ32709.1| hisM, subunit of histidine ABC transporter and
           lysine/arginine/ornithine ABC Transporter [Escherichia
           coli BL21(DE3)]
 gi|253323813|gb|ACT28415.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974217|gb|ACT39888.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|253978384|gb|ACT44054.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BL21(DE3)]
 gi|254593600|gb|ACT72961.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Escherichia coli O157:H7
           str. TW14359]
 gi|257755000|dbj|BAI26502.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O26:H11 str. 11368]
 gi|257760041|dbj|BAI31538.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O103:H2 str. 12009]
 gi|257765385|dbj|BAI36880.1| histidine/lysine/arginine/ornithine transporter subunit HisM
           [Escherichia coli O111:H- str. 11128]
 gi|260448599|gb|ACX39021.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281179393|dbj|BAI55723.1| histidine ABC transporter permease component [Escherichia coli
           SE15]
 gi|281601748|gb|ADA74732.1| Histidine transport system permease protein hisM [Shigella flexneri
           2002017]
 gi|290763421|gb|ADD57382.1| Histidine transport system permease protein hisM [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323474|gb|EFE62902.1| histidine transport system permease hisM [Escherichia coli B088]
 gi|291433247|gb|EFF06226.1| histidine transport system permease hisM [Escherichia coli B185]
 gi|294491382|gb|ADE90138.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           IHE3034]
 gi|299880789|gb|EFI89000.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300299112|gb|EFJ55497.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300307704|gb|EFJ62224.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300316774|gb|EFJ66558.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300396682|gb|EFJ80220.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300404279|gb|EFJ87817.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300408528|gb|EFJ92066.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300414335|gb|EFJ97645.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300419207|gb|EFK02518.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300451954|gb|EFK15574.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300460840|gb|EFK24333.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300525311|gb|EFK46380.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529234|gb|EFK50296.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300841405|gb|EFK69165.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300844808|gb|EFK72568.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301074280|gb|EFK89086.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|305851975|gb|EFM52427.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           NC101]
 gi|306908638|gb|EFN39135.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307554368|gb|ADN47143.1| histidine transport system permease protein HisM [Escherichia coli
           ABU 83972]
 gi|307626156|gb|ADN70460.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Escherichia coli
           UM146]
 gi|308123476|gb|EFO60738.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|308927353|gb|EFP72827.1| histidine transport system permease protein hisM [Shigella
           dysenteriae 1617]
 gi|309702619|emb|CBJ01948.1| histidine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|310332028|gb|EFP99263.1| histidine transport system permease protein hisM [Escherichia coli
           1827-70]
 gi|312287804|gb|EFR15709.1| histidine transport system permease protein hisM [Escherichia coli
           2362-75]
 gi|312946926|gb|ADR27753.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily protein [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|313651131|gb|EFS15530.1| histidine transport system permease protein hisM [Shigella flexneri
           2a str. 2457T]
 gi|315061600|gb|ADT75927.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli W]
 gi|315136942|dbj|BAJ44101.1| histidine transport system permease component [Escherichia coli
           DH1]
 gi|315255244|gb|EFU35212.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315285931|gb|EFU45369.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315292288|gb|EFU51640.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315298160|gb|EFU57424.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|315615576|gb|EFU96208.1| histidine transport system permease protein hisM [Escherichia coli
           3431]
 gi|320178718|gb|EFW53681.1| Histidine ABC transporter, permease protein HisM [Shigella boydii
           ATCC 9905]
 gi|320192069|gb|EFW66714.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. EC1212]
 gi|320196175|gb|EFW70799.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           WV_060327]
 gi|320199898|gb|EFW74487.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           EC4100B]
 gi|320641135|gb|EFX10614.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O157:H7 str. G5101]
 gi|320646523|gb|EFX15442.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O157:H- str. 493-89]
 gi|320651620|gb|EFX20000.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O157:H- str. H 2687]
 gi|320657372|gb|EFX25174.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320663074|gb|EFX30391.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667892|gb|EFX34800.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Escherichia coli O157:H7 str. LSU-61]
 gi|323156458|gb|EFZ42613.1| histidine transport system permease protein hisM [Escherichia coli
           EPECa14]
 gi|323161644|gb|EFZ47529.1| histidine transport system permease protein hisM [Escherichia coli
           E128010]
 gi|323168521|gb|EFZ54201.1| histidine transport system permease protein hisM [Shigella sonnei
           53G]
 gi|323171990|gb|EFZ57634.1| histidine transport system permease protein hisM [Escherichia coli
           LT-68]
 gi|323176767|gb|EFZ62357.1| histidine transport system permease protein hisM [Escherichia coli
           1180]
 gi|323184373|gb|EFZ69749.1| histidine transport system permease protein hisM [Escherichia coli
           1357]
 gi|323187968|gb|EFZ73263.1| histidine transport system permease protein hisM [Escherichia coli
           RN587/1]
 gi|323377819|gb|ADX50087.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323936597|gb|EGB32884.1| inner membrane transport system [Escherichia coli E1520]
 gi|323940996|gb|EGB37183.1| inner membrane transport system [Escherichia coli E482]
 gi|323944820|gb|EGB40886.1| inner membrane transport system [Escherichia coli H120]
 gi|323952100|gb|EGB47974.1| inner membrane transport system [Escherichia coli H252]
 gi|323956073|gb|EGB51826.1| inner membrane transport system [Escherichia coli H263]
 gi|323961380|gb|EGB56991.1| inner membrane transport system [Escherichia coli H489]
 gi|323973109|gb|EGB68302.1| inner membrane transport system [Escherichia coli TA007]
 gi|324006683|gb|EGB75902.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324013191|gb|EGB82410.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|324020829|gb|EGB90048.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324117815|gb|EGC11714.1| inner membrane transport system [Escherichia coli E1167]
 gi|325496653|gb|EGC94512.1| histidine transport system membrane protein M [Escherichia
           fergusonii ECD227]
 gi|326339660|gb|EGD63471.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. 1125]
 gi|326344122|gb|EGD67883.1| Histidine ABC transporter, permease protein HisM [Escherichia coli
           O157:H7 str. 1044]
 gi|330912130|gb|EGH40640.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           AA86]
 gi|331039744|gb|EGI11964.1| histidine transport system permease protein HisM [Escherichia coli
           H736]
 gi|331043686|gb|EGI15824.1| histidine transport system permease protein HisM [Escherichia coli
           M605]
 gi|331048599|gb|EGI20675.1| histidine transport system permease protein HisM [Escherichia coli
           M718]
 gi|331064200|gb|EGI36111.1| histidine transport system permease protein HisM [Escherichia coli
           TA271]
 gi|331074713|gb|EGI46033.1| histidine transport system permease protein HisM [Escherichia coli
           H591]
 gi|331078930|gb|EGI50132.1| histidine transport system permease protein HisM [Escherichia coli
           H299]
 gi|332088438|gb|EGI93556.1| histidine transport system permease protein hisM [Shigella boydii
           5216-82]
 gi|332100895|gb|EGJ04241.1| histidine transport system membrane protein M [Shigella sp. D9]
          Length = 238

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|300928694|ref|ZP_07144212.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300463283|gb|EFK26776.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
          Length = 347

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 105 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|291286086|ref|YP_003502902.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290883246|gb|ADD66946.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 225

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 96/233 (41%), Gaps = 14/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +        L               F +++ IVL L    L +    K      +L
Sbjct: 1   MSFDWKWGFVWDILPRLIEATGNTVMAACFGYLIAIVLGLM-FALGQRTRFKVLSV--VL 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +   I   P ++ I   + +                 +   + +  IA+  +  A+++
Sbjct: 58  RETVEFIRSTPLVLQIFFVFYVGPQV-----------GVMLSPWTAGMIAIGLHYGAYLS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+G+ +VP+GQ EAA++L L+  +    V+LPQA+      + +  + + K++ +  
Sbjct: 107 EVYRAGIESVPKGQWEAAVSLSLSRVRTYTRVILPQAVPPAFAGMGNYLVGIFKDTPMLS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +G A+L+    +I ++  + +E   +   I+L +S+  A  +  L   I  K
Sbjct: 167 VIGVAELMHTANSIGSENYRYLEPYTLVGVIFLLISLPTAWMLRILERVIRKK 219



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 35/80 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 ++    NT   A  G + A ++G +   G+ +  K+++ + R  VE  R+ P +
Sbjct: 11  WDILPRLIEATGNTVMAACFGYLIAIVLGLMFALGQRTRFKVLSVVLRETVEFIRSTPLV 70

Query: 143 VVIFFLYKSVLSVLPIPDHS 162
           + IFF++     V  +    
Sbjct: 71  LQIFFVFYVGPQVGVMLSPW 90


>gi|90581126|ref|ZP_01236925.1| Putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90437647|gb|EAS62839.1| Putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 223

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 17/233 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   T+       +F+ V+G++L+L      R +       L  L
Sbjct: 3   FDFNYMLSLMPILLKYLPTTLLMATIGAIFALVVGLILALV-----RIYQLPLLNTLTQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P L   +          F +  I LS + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQIIPSLVGLD---------AFSAAVIGLSLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +  V R Q EA++A+G+T  +  R ++LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAITGVDRSQREASLAIGMTEWQTMRRIILPQATRIALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G  ++++      + + +  E  L    IY ++ +++         ++  
Sbjct: 167 FTLGVPEIMAKAQMEASSSFKFFEAFLAVAMIYWAVVVVLTRLQQLAETRLDR 219



 Score = 43.8 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G I A ++G ++   R+    L+  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLPTTLLMATIGAIFALVVGLILALVRIYQLPLLNTLTQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  ++P
Sbjct: 75  YYGLPQIIP 83


>gi|78063224|ref|YP_373132.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77971109|gb|ABB12488.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 243

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 93/235 (39%), Gaps = 3/235 (1%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                  +                K+ V S    +VL L     ++    +  K++   Y
Sbjct: 9   SFWIPHMIFQGFGPLLWAGTVETVKLAVLSLAASLVLGLIGAS-AKLSTNRMLKSIGTFY 67

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T LI  +P LVL+ L +                       F++  I L     A+  E
Sbjct: 68  --TTLIRAVPDLVLMLLLFYGIQILLNNVTDMLGWDQIDIDPFVAGVITLGFIYGAYFTE 125

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EA  A G++  +  R +L PQ MR  +P + + +  L+K ++L   
Sbjct: 126 TFRGAFLAVPRGQLEAGFAYGMSGWRVFRRILFPQMMRFALPGIGNNWQVLVKATALVSI 185

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 186 IGLADVVKASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 240



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 37/77 (48%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            +P+     +   +  G V T  LA   +  + ++G +  + +LS N+++  I   Y  +
Sbjct: 11  WIPHMIFQGFGPLLWAGTVETVKLAVLSLAASLVLGLIGASAKLSTNRMLKSIGTFYTTL 70

Query: 136 FRNIPPLVVIFFLYKSV 152
            R +P LV++  L+  +
Sbjct: 71  IRAVPDLVLMLLLFYGI 87


>gi|83746552|ref|ZP_00943603.1| GlnP [Ralstonia solanacearum UW551]
 gi|207743862|ref|YP_002260254.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726883|gb|EAP74010.1| GlnP [Ralstonia solanacearum UW551]
 gi|206595262|emb|CAQ62189.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 231

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 21/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH----- 212
           +P   + +      +   +S   L++  +   FV +  LGIV++L     S         
Sbjct: 1   MPHFDLSMLLSGQYHQWLVSGFFLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQA 60

Query: 213 -EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +  + +PLL    F  FG P L+  A++  L+                ++ E  S  I
Sbjct: 61  FVEAIRNVPLLAHMLFWYFGAPQLLPNAVRTWLY---------------DLNYEAASAVI 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA++AE +RSGL ++P+ Q+EA+ ALGL+  +A R V+LPQ++R  +PPL SQ 
Sbjct: 106 ALVLYTAAYMAEDIRSGLRSIPKEQLEASRALGLSFLQAMRRVILPQSLRVTVPPLVSQT 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL KNSS+A+ +G A+L+     + + T +  E        YL++SI I +F      +
Sbjct: 166 LNLWKNSSIAMVIGVAELMYEAQQVESATFRGFEAFAFATAAYLTISIAITVFSAWYQHR 225

Query: 392 IALK 395
             ++
Sbjct: 226 YPVR 229



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GF  +  L+    + A  +G +V   R++ +  +  I + +VE  RN+P 
Sbjct: 11  SGQYHQWLVSGFFLSIKLSVLAFVLALPLGIVVALLRMAPSAPLRAIGQAFVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           L  + F Y     +LP    + +  
Sbjct: 71  LAHMLFWYFGAPQLLPNAVRTWLYD 95


>gi|323178549|gb|EFZ64125.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli 1180]
          Length = 347

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRRRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y     +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFFGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 TWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|317153613|ref|YP_004121661.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943864|gb|ADU62915.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 588

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 17/253 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L V  F ++ + S LP                 GL   + ++       + SF +G+++ 
Sbjct: 344 LAVAGFNFEIIWSNLPTLLIWRFPDGDPTEFFHGLGGLSGSVLIAVISIIGSFFIGLLVG 403

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +  T  +R F   +          T  I  + ++ LI + +  +           I    
Sbjct: 404 MGRTAKNRIFRIPS----------TVYIEFVRSIPLILVIFWTN------TVIFGIVFKI 447

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F +  IAL+ + AA+IAE VR G+  +P GQ+EAA A GL + +  R ++LPQA++
Sbjct: 448 DIQTFWAGTIALTFFFAAYIAETVRGGIENIPVGQVEAATASGLGYFQIMRKIILPQALK 507

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIM 380
            ++P L   ++   K++SL   +G  +L      I N+      EI      +Y   S +
Sbjct: 508 QMLPALVGMFIAAFKDTSLVYIIGVTELTRAAYAINNRIMIYPFEIFTTVAMLYFVPSYL 567

Query: 381 IALFMNRLNAKIA 393
           ++ +  RL  K++
Sbjct: 568 MSQYAKRLERKLS 580



 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 8/262 (3%)

Query: 135 VFRNIPPLVVI-FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
             +NI  L +     Y          D +  +                 +     I ++S
Sbjct: 10  WIQNITLLALFGLVTYYFAFVFEFKYDFNWAVFTTEGQYGHMGKLMLDGLGLTITITIYS 69

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-YQLHFDKPVLG 252
             + + L      L+R    K        Y+  F     P L+ +    + L +  P   
Sbjct: 70  AAIALGLGTIFG-LARLSSFKPVYWFATSYVELF--RNTPLLIQLFFWNFALPYAFPEEI 126

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +   I    ++ EF +  I    +T AF+AEI+R+G+ ++P+G +EA+ + GL   +  R
Sbjct: 127 R---IQLFDMNFEFWTATIGCGIFTGAFMAEIIRAGIQSIPKGLLEASYSSGLNFSQTLR 183

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LP + R IIPPL S++LN +KN+SLA+ +G A+L      + + T    E + +   
Sbjct: 184 KIILPLSFREIIPPLGSEFLNNMKNTSLAMTIGVAELCWSMQEVYSLTYHTFEAMTVATA 243

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
           +Y  LS+ IA  +N +N ++ +
Sbjct: 244 VYSCLSLSIAGILNLVNIRLKI 265



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 6/133 (4%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYA---TAILVGFVNTFWLAFSGMIPATIIGTLVGAG 117
             F+ E   F+ D     +T++  Y      +L G   T  +       A  +GT+ G  
Sbjct: 27  FAFVFE---FKYDFNWAVFTTEGQYGHMGKLMLDGLGLTITITIYSAAIALGLGTIFGLA 83

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           RLS+ K V W    YVE+FRN P L+ +FF   ++    P      +           + 
Sbjct: 84  RLSSFKPVYWFATSYVELFRNTPLLIQLFFWNFALPYAFPEEIRIQLFDMNFEFWTATIG 143

Query: 178 FPTLTMDTNAKIF 190
               T    A+I 
Sbjct: 144 CGIFTGAFMAEII 156



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 3/153 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  +A   +I +  IG LVG GR + N++      VY+E  R+IP ++VIF+  
Sbjct: 378 LGGLSGSVLIAVISIIGSFFIGLLVGMGRTAKNRIFRIPSTVYIEFVRSIPLILVIFWTN 437

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-LGIVLSLFATRLS 208
             +  ++   D        + L     ++   T+    +      V       L   ++ 
Sbjct: 438 TVIFGIVFKIDIQTFWAGTIALTFFFAAYIAETVRGGIENIPVGQVEAATASGLGYFQIM 497

Query: 209 R--HFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           R     +   + LP L       F   +LV I 
Sbjct: 498 RKIILPQALKQMLPALVGMFIAAFKDTSLVYII 530


>gi|50914755|ref|YP_060727.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS10394]
 gi|94994868|ref|YP_602966.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS10750]
 gi|50903829|gb|AAT87544.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS10394]
 gi|94548376|gb|ABF38422.1| Amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS10750]
          Length = 297

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+        F  VL +
Sbjct: 32  TSVFLTSGWAFYDHLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLSGATFGLVLAL 91

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + +L      +  +       P+  I    + G P LV + L Y     F K +  ++ F
Sbjct: 92  IFALVKINKVKLLY-------PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 144

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 145 DWNVNAIPASIFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 204

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  ++ +    +     +  E  +    +Y S
Sbjct: 205 PNATVVAIPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWS 264

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI++      +  K+A+K
Sbjct: 265 ISILMEQVGRLIENKMAIK 283


>gi|78065759|ref|YP_368528.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77966504|gb|ABB07884.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 229

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDFVGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GAAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|260662607|ref|ZP_05863502.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|260553298|gb|EEX26241.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 462

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + + G++L +      + F   +        +  ++  G+P +V   L + +
Sbjct: 271 LTVVGAALALLFGVILGVMGISDGKIFSSISS-------VIIYIFRGMPMIV---LAFFI 320

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +   P +            P F +  + L     A+I  IV+ G  AV RGQ EAA +LG
Sbjct: 321 YIGMPSVIG-------HKIPLFTAGILTLMLDEGAYIGAIVKGGFQAVDRGQWEAARSLG 373

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + KA   V++PQ ++ ++P L +Q +  LK++S+  A+G  +L   G  II Q  +  
Sbjct: 374 LPYYKALVKVIMPQGIKIMVPSLVNQLIITLKDTSILSAIGVMELTQTGTVIIAQNMEGF 433

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++ LI   IY+ +  ++    N +  K+A
Sbjct: 434 KMWLIIGVIYIIIITLLTWLSNYVQRKMA 462



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 38/75 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   A+L G   T  L   G   A + G ++G   +S  K+ + I  V + +FR +P +V
Sbjct: 256 SNKDALLSGLGETLLLTVVGAALALLFGVILGVMGISDGKIFSSISSVIIYIFRGMPMIV 315

Query: 144 VIFFLYKSVLSVLPI 158
           + FF+Y  + SV+  
Sbjct: 316 LAFFIYIGMPSVIGH 330


>gi|312796581|ref|YP_004029503.1| cystine transport system permease protein [Burkholderia rhizoxinica
           HKI 454]
 gi|312168356|emb|CBW75359.1| Cystine transport system permease protein [Burkholderia rhizoxinica
           HKI 454]
          Length = 219

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K  + S   G+     +  L      +   +    Y+S  ++ G P LV I + Y    
Sbjct: 22  IKFALLSMAFGLAGG-MSIALMSISERRWPVSAARAYVS--IMRGTPLLVQIFVVYY--- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  +ALS   +A+++E +R  ++ + RGQ  AA +LGL+
Sbjct: 76  --------GLPSVGIELDPTPAGVLALSANVSAYLSESMRGAILGIARGQWLAAYSLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            ++  R V+ PQA+R  +P L++  ++L+K++SL   +   +L+     +I  T Q + +
Sbjct: 128 RQQTLRYVVGPQALRIAVPSLSNSLISLVKDTSLVSVITVTELLHSAQEVIAATYQPLPL 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +    +Y  L  ++    +RL   +AL  + 
Sbjct: 188 YVGAASVYWVLCHLLEGLQHRLERYLALPTRH 219


>gi|229826278|ref|ZP_04452347.1| hypothetical protein GCWU000182_01650 [Abiotrophia defectiva ATCC
           49176]
 gi|229789148|gb|EEP25262.1| hypothetical protein GCWU000182_01650 [Abiotrophia defectiva ATCC
           49176]
          Length = 224

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 16/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             N  L     T+  +     F  +LG VL++      ++      + +   YI   ++ 
Sbjct: 14  YGNLFLIGTGYTLLLSLITVFFGTILGSVLAML-----KNNRFWLVRFIVSAYIE--IVR 66

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + +   L               +    +F+S+ +AL   +AA+++E++RSG+ 
Sbjct: 67  GTPILLQLCIFTFL---------IPLAFSAFKPSDFVSVTVALILNSAAYVSEVIRSGIE 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EAA +LGL  R+    ++LPQA+R I+P L ++++ ++K +SLA      DL+
Sbjct: 118 AVDKGQTEAARSLGLNKRQTMFKIVLPQAIRYILPALGNEFIMMIKETSLASTFFVGDLM 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    I   T   IE ++I   IY  L+  ++  +  L  ++   E
Sbjct: 178 TRYQVITGATFLVIEPLIIIGVIYFILTFTLSRGVAVLERRMKAGE 223



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L+G   T  L+   +   TI+G+++   + +   LV +I   Y+E+ R  P L+ 
Sbjct: 14  YGNLFLIGTGYTLLLSLITVFFGTILGSVLAMLKNNRFWLVRFIVSAYIEIVRGTPILLQ 73

Query: 145 IFFLYKSVLSVL 156
           +      +    
Sbjct: 74  LCIFTFLIPLAF 85


>gi|265985359|ref|ZP_06098094.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306845793|ref|ZP_07478361.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|264663951|gb|EEZ34212.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306273685|gb|EFM55523.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
          Length = 219

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 37  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 83

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 84  AALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 143

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 144 SNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 203

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 204 LERRFGRY 211



 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 2   ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 62  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 92


>gi|306840653|ref|ZP_07473405.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306289391|gb|EFM60627.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 207

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 25  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 71

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 72  AALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 131

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 132 SNTFISLVKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 191

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 192 LERRFGRY 199


>gi|300946950|ref|ZP_07161181.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300958248|ref|ZP_07170395.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300315066|gb|EFJ64850.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300453410|gb|EFK17030.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
          Length = 347

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 105 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGR 344


>gi|91779493|ref|YP_554701.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692153|gb|ABE35351.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 567

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 13/182 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +T  +    YI    + G P L+ +       FD   L    F        E  +
Sbjct: 80  RLSRFRTLNSAAWGYIWF--VRGTPQLLQLVFI----FDALPLIGLRF-------DEVTT 126

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I  +   AAF AE+ R+G+++V R Q  AA ALG+      R ++LPQ+MR++IP L 
Sbjct: 127 AVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLRRIILPQSMRAVIPGLA 186

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  + +LK +S+A  +   +L      ++ Q  +   +      IYL L+  I+L    L
Sbjct: 187 NDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFGAAAVIYLFLTSGISLLQVWL 246

Query: 389 NA 390
             
Sbjct: 247 ER 248



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G      +    M    ++G  +   RLS  + +      Y+   R  P L+ + F+
Sbjct: 51  LLGGAWIAVKITLIAMSIGLVLGLGLALMRLSRFRTLNSAAWGYIWFVRGTPQLLQLVFI 110

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  +    D       G  LN    S         +     S     +       L 
Sbjct: 111 FDALPLIGLRFDEVTTAVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLR 170

Query: 209 RHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R    ++ +A +P L   T  +  L ++  +    +L F    +   NF   +       
Sbjct: 171 RIILPQSMRAVIPGLANDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFG---A 227

Query: 268 SLYIALSC 275
           +  I L  
Sbjct: 228 AAVIYLFL 235


>gi|331266847|ref|YP_004326477.1| ABC transporter membrane-spanning permease,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
 gi|326683519|emb|CBZ01137.1| ABC transporter membrane-spanning permease,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
          Length = 225

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +    LS   H+   + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIIFGVLSTSKHQ-ILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++ +      + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLISE-----HTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G + G    S ++++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISEHTIMIPIYW 94


>gi|262370797|ref|ZP_06064121.1| histidine transport system permease hisQ [Acinetobacter johnsonii
           SH046]
 gi|262314159|gb|EEY95202.1| histidine transport system permease hisQ [Acinetobacter johnsonii
           SH046]
          Length = 229

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 5/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S VL I++ LF    ++    +  + +  LY  T LI  +P LV++ L + 
Sbjct: 15  WMTIQLALLSLVLSIIIGLFGAS-AKLSRIQILRHVATLY--TTLIRSVPDLVIMLLLFY 71

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L      + +   +    ++P F++  I L+    A+  E  R    AVP+GQ+EAA A
Sbjct: 72  SLQLGLNSITESIHMEQIDINP-FVAGVITLAFIYGAYFTETFRGAFQAVPKGQLEAAYA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G+T  +  R VL PQ MR  +P + + +  L+K ++L   +G  D+V +       + Q
Sbjct: 131 YGMTPFQVFRRVLFPQMMRFALPGIGNNWQVLIKATALVSLIGLTDIVKITQDAGRSSMQ 190

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                ++   IYL+++ +  L +  L  + +   KK
Sbjct: 191 VFYFSIVAAVIYLAITTLSNLILMWLERRYSAGVKK 226



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 36/68 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  LA   ++ + IIG    + +LS  +++  +  +Y  + R++P LV+
Sbjct: 6   YGPVLLSGTWMTIQLALLSLVLSIIIGLFGASAKLSRIQILRHVATLYTTLIRSVPDLVI 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSL 73


>gi|238753466|ref|ZP_04614829.1| Arginine transport system permease protein artQ [Yersinia ruckeri
           ATCC 29473]
 gi|238708419|gb|EEQ00774.1| Arginine transport system permease protein artQ [Yersinia ruckeri
           ATCC 29473]
          Length = 238

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLI 238
                 V   +L ++ ++  +   +             + LP + +  F+ FG   L+++
Sbjct: 17  LALCALVLGLILAMLFAVLESSRWKVVSYLGTAWVTLLRGLPEILVVLFIYFGSSQLLMM 76

Query: 239 AL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
               + L+F    L     I    VSP F+   IAL+   +A+ ++ +R  L AVP GQ 
Sbjct: 77  LSDGFTLNFYLFELPVKLNIDTFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALG++       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I 
Sbjct: 136 ESGQALGMSQTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 196 TRTQEPFTWYMIAAAIYLVVTLLSQYVIKLIELRTTRFER 235


>gi|254250640|ref|ZP_04943959.1| ABC transporter, permease protein [Burkholderia cenocepacia PC184]
 gi|124879774|gb|EAY67130.1| ABC transporter, permease protein [Burkholderia cenocepacia PC184]
          Length = 237

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 96/241 (39%), Gaps = 18/241 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT--RLSRHFH 212
           + P         F +     GL           ++     VLG  + L     RL+ H  
Sbjct: 11  LPPGNPTGQPAMFSLNTFIDGLPLLFHAALMTLEVSAAGLVLGFCIGLVVCCGRLAPHVA 70

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +T       Y+  F    L   +L+   +       V             P  M+   A
Sbjct: 71  IRTAAG---AYVRVFRGVPLLVQLLLVYYFLPFVGLNV-------------PPVMAAVSA 114

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S  +AA+IAEI+R G   +P+GQ+EAA  LG +       + +PQA+R  +P L ++ +
Sbjct: 115 VSLCSAAYIAEILRGGFANLPKGQLEAATMLGFSATDRLWRIQVPQAVRMTLPSLVNEMV 174

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+K SSL   VG A++      I   T Q +E  +    IY  L   +AL  +    ++
Sbjct: 175 LLIKASSLVSVVGVAEITRTAQNIAASTYQPLEAYVAAGMIYFLLCGSLALIAHGAERRL 234

Query: 393 A 393
            
Sbjct: 235 R 235



 Score = 36.8 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + T  ++ +G++    IG +V  GRL+ +  +      YV VFR 
Sbjct: 40  LMTLEVSAAGLVLGFCIGLVVCCGRLAPHVAIRTAAGAYVRVFRG 84


>gi|157148850|ref|YP_001456169.1| hypothetical protein CKO_04683 [Citrobacter koseri ATCC BAA-895]
 gi|157086055|gb|ABV15733.1| hypothetical protein CKO_04683 [Citrobacter koseri ATCC BAA-895]
          Length = 368

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+LVG  +         I       +   GR  
Sbjct: 78  WVFIHERFG-QFMYGLYPHDQRWRINLALLVGLAS---------IVPMFWKAMPRRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I P+VV + +Y     +  +                     T
Sbjct: 126 -----------YIAAWAVIYPIVVWWLMYGGFFGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +  LGI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 162 LTLIIASVGIAGALPLGILLAL-----GRRSHMPIVRMLSVIFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMSEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 365


>gi|323492514|ref|ZP_08097662.1| ABC transporter permease [Vibrio brasiliensis LMG 20546]
 gi|323313301|gb|EGA66417.1| ABC transporter permease [Vibrio brasiliensis LMG 20546]
          Length = 225

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T A +   + ++G+++++    ++R+ H          +I  F   G P L
Sbjct: 10  LPIYLDGLMTTAWLVGLALIIGLIVAIPLG-VARNSHNYLINGPSWAFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G+      R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMGTFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFIILGCFKYAEKRF 217



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G + T WL    +I   I+   +G  R S N L+      ++  FR  P LV ++ +
Sbjct: 13  YLDGLMTTAWLVGLALIIGLIVAIPLGVARNSHNYLINGPSWAFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y  +    P+ D      + 
Sbjct: 73  YYGMDQFFPVKDTLWENAWF 92


>gi|259651117|dbj|BAI43279.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 487

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  +     TM        F+ ++GI++             K  + +   +I  F   G
Sbjct: 282 WSTLMGGLRETMVLTIVAIFFATLVGILIGFLG-----VIPNKLCQGIATTFIYIF--RG 334

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 335 LPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 384

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 385 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 444

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 445 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 486



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            + ++ G   T  L    +  AT++G L+G   +  NKL   I   ++ +FR +P +V+ 
Sbjct: 282 WSTLMGGLRETMVLTIVAIFFATLVGILIGFLGVIPNKLCQGIATTFIYIFRGLPLMVLA 341

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 342 LFIYTGVPSL 351


>gi|116618335|ref|YP_818706.1| ABC-type amino acid transport system, pemease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116097182|gb|ABJ62333.1| amino acid ABC transporter membrane protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 219

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 18/231 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSF---VLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F     L +    M       +FS    V G +  L    L R         +   YI  
Sbjct: 3   FSYEMILDYAPFFMHGLLYTLLFSLCGVVFGTIFGLII-ALGRMSKNPVISGIFKTYIGL 61

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIV 285
           F   G P  V I +             F  +         +++  ++LS   AA+IAE  
Sbjct: 62  F--RGTPLFVQILI-----------TNFGVVPAIFGHSNPYIAGALSLSLNAAAYIAETF 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ ++  GQ EAA  LGL+     R +++PQA++ +IP L +++++L+K+SSL  A+ 
Sbjct: 109 RSGIQSISEGQREAARTLGLSQFDTMRFIIVPQAIKIVIPALGNEFISLIKDSSLVSAIS 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++      +  Q        L    +YL L++  +  M     K+A  +
Sbjct: 169 APEITYWAQAMNAQYYVVWTPYLTVAVLYLILTLSASRLMKLWERKMAQND 219



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 38/80 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G + T   +  G++  TI G ++  GR+S N +++ I + Y+ +FR  P  V 
Sbjct: 11  YAPFFMHGLLYTLLFSLCGVVFGTIFGLIIALGRMSKNPVISGIFKTYIGLFRGTPLFVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           I      V+  +    +  +
Sbjct: 71  ILITNFGVVPAIFGHSNPYI 90


>gi|158423550|ref|YP_001524842.1| glutamate/aspartate transport system permease protein 2
           [Azorhizobium caulinodans ORS 571]
 gi|158330439|dbj|BAF87924.1| glutamate/aspartate transport system permease protein 2
           [Azorhizobium caulinodans ORS 571]
          Length = 255

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 73/247 (29%), Positives = 110/247 (44%), Gaps = 12/247 (4%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y    SV        V  +   L    L    LT  T A   VF  +LG+          
Sbjct: 3   YDWSWSVFLDLSSDGVHSYLYNLGLGVLWTLGLTGATAAGALVFGSILGVF--------- 53

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFM 267
           R        A+   Y+  F    +P LV + L Y  L    P        G       F+
Sbjct: 54  RTTRAPVLNAIGATYVEIF--RNIPLLVQMFLWYFVLPEVLPKAIGQAIKGMPAPWNAFV 111

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              + L+ Y +A I E +RSG+ ++PRGQ++AA+ALGLT   A R V+LP+A R +IPPL
Sbjct: 112 PALLCLTFYGSARIGEQMRSGIQSLPRGQLQAALALGLTPVMAYRHVVLPEAFRLMIPPL 171

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           TS+++ ++K SS+A+ +G  +L      +   +    E        YL ++  I L M  
Sbjct: 172 TSEFMAIVKYSSVAMTIGLLELTGQARAMQEASFHIFEAFSAATVGYLVINGCIVLAMRW 231

Query: 388 LNAKIAL 394
           L  ++A+
Sbjct: 232 LERRLAV 238



 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 41/89 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY   + +G + T  L  +    A + G+++G  R +   ++  I   YVE+FRNIP LV
Sbjct: 20  SYLYNLGLGVLWTLGLTGATAAGALVFGSILGVFRTTRAPVLNAIGATYVEIFRNIPLLV 79

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +F  Y  +  VLP      +       N
Sbjct: 80  QMFLWYFVLPEVLPKAIGQAIKGMPAPWN 108


>gi|315612723|ref|ZP_07887634.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315314833|gb|EFU62874.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 225

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +    LS   H+   + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIIFGVLSTSKHQ-ILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G + G    S ++++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|119356996|ref|YP_911640.1| polar amino acid ABC transporter, inner membrane subunit
           [Chlorobium phaeobacteroides DSM 266]
 gi|119354345|gb|ABL65216.1| amino acid ABC transporter membrane protein, PAAT family
           [Chlorobium phaeobacteroides DSM 266]
          Length = 340

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 15/214 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   I VFS VLG  L        R    +    +   YIS  ++ G P LV + L + +
Sbjct: 136 TTVIISVFSTVLGTFLGAMIC-FMRMSRNRLLSVIAKSYIS--ILRGTPVLVFLMLMFYV 192

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F             S      +   IA     AA++AEI R+G+ ++ +GQ EA IA+G
Sbjct: 193 VF------------ASVDINPVIVSVIAFGMNFAAYVAEIYRAGINSIDKGQAEAGIAMG 240

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T       ++LPQ +  I+P    ++++L+K +S+   +   DL      I ++T  A 
Sbjct: 241 FTKVNTFLFIILPQTVLRILPVYKGEFISLVKMTSVVGYIAVQDLTKASDIIRSRTFDAF 300

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +++   +Y  +S ++ LF+  +      K K+
Sbjct: 301 FPLVMVAILYFCISWVLMLFLEYVERLADPKSKR 334



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV-VIFF 147
           IL G   T  ++    +  T +G ++   R+S N+L++ I + Y+ + R  P LV ++  
Sbjct: 130 ILDGLKTTVIISVFSTVLGTFLGAMICFMRMSRNRLLSVIAKSYISILRGTPVLVFLMLM 189

Query: 148 LYKSVLSVLPIPDHSIVLPFGM 169
            Y    SV   P    V+ FGM
Sbjct: 190 FYVVFASVDINPVIVSVIAFGM 211


>gi|317486177|ref|ZP_07945016.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316922568|gb|EFV43815.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 224

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 14/232 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      F+    L      +  +  + V S  +G VL +    ++R F  K  ++L   
Sbjct: 1   MQWLDPDFIFQTVLPALNRGLVMSIALIVPSATIGFVLGVLTG-VARVFGPKWLRSLGNG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           + + F   G+P +V + + Y           F           + +  +     T A+ +
Sbjct: 60  FTTIF--RGVPLVVQLMILY-----------FGLPNLGIYLEPYPASVLGFILCTGAYQS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR  L+++ +GQ++AA ALG T  +    V++PQA R  +P   ++ + L+K SSLA 
Sbjct: 107 EYVRGALLSIRQGQIKAAYALGFTKLQTILWVVIPQAARRALPGCGNEIIYLIKYSSLAY 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   +L      +++++ +  E+ ++    YL L      F+ +L  K A+
Sbjct: 167 IITCIELTGEAKVLVSRSFRPTEVYIVAGIYYLVLVSFATWFLQKLERKFAI 218



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q + P     +   A+  G V +  L         ++G L G  R+   K +  +   +
Sbjct: 1   MQWLDPDFIFQTVLPALNRGLVMSIALIVPSATIGFVLGVLTGVARVFGPKWLRSLGNGF 60

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
             +FR +P +V +  LY  + ++    +       G  L         
Sbjct: 61  TTIFRGVPLVVQLMILYFGLPNLGIYLEPYPASVLGFILCTGAYQSEY 108


>gi|260772507|ref|ZP_05881423.1| amino acid ABC transporter permease protein [Vibrio metschnikovii
           CIP 69.14]
 gi|260611646|gb|EEX36849.1| amino acid ABC transporter permease protein [Vibrio metschnikovii
           CIP 69.14]
          Length = 225

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 9/219 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T   +   S V+G+ +++    ++R+            YI  F   G P
Sbjct: 8   QSLPLYFSGLWTTVWLVGLSLVIGLAVAIPL-AIARNSSLWVIWLPAWCYIYFF--RGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  + 
Sbjct: 65  LLVQLYLIYY------GMDQFFPVKDTWWEHAWFCALVAFILNTSAYTAEIIRGAINGLS 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +G++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  V   DL    
Sbjct: 119 KGEIEAAKAYGMSPWLTYRRIVLPSALRRALPAYSNEVIFMLHGSAVAGIVTILDLTGTA 178

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + ++     E  L+    YL L+ +I     R   + 
Sbjct: 179 RLVSSRYYAPFEAFLVAGLFYLLLTFLILWCFKRAEKRF 217



 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T WL    ++    +   +   R S+  ++      Y+  FR  P LV ++ +
Sbjct: 13  YFSGLWTTVWLVGLSLVIGLAVAIPLAIARNSSLWVIWLPAWCYIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQFFPVKDTWWEHAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|171321440|ref|ZP_02910388.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171093286|gb|EDT38486.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 229

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    ++L L     ++    +  + +   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVETVKLAVLSLAASLILGLVG-ATAKLSTNRVLRWIGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +        +              F++  I L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNMATDALGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 188 TLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 226



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  LA   +  + I+G +    +LS N+++ WI   Y  + R +P LV+
Sbjct: 6   FGPLLWAGTVETVKLAVLSLAASLILGLVGATAKLSTNRVLRWIGTFYTTLIRAVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+  +
Sbjct: 66  MLLLFYGI 73


>gi|56964695|ref|YP_176426.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56910938|dbj|BAD65465.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 221

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 18/235 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            S  L   +      L     T+         + V G +L+L   R+S+  + +      
Sbjct: 2   RSFDLNLAIESFPFILKGLQYTLFVAVISMAIALVFGFILAL--GRMSKQAYVRIP---- 55

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+ F     +L+ L            Q + +          +  +  S  T+A+
Sbjct: 56  ---CMLFISFNRGVPILLLLFLLYAALPEFGFQLSAV---------AAAIVGFSLNTSAY 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+ RS L AV RGQ EAA +LGL+  KA + ++LPQA+R  +PPL++ +L+L+K +S+
Sbjct: 104 VAEVNRSALAAVDRGQHEAAASLGLSKTKAMQHIILPQAVRIALPPLSNIFLSLVKMTSI 163

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A  +   +L+     +  +      ++++   IY  +  +++L    L  +    
Sbjct: 164 ASTIALPELMYQARIVGGREFNYFTVLIVAALIYWGICSLLSLLQRYLEKRFNRY 218



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 38/99 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T ++A   M  A + G ++  GR+S    V   C +++   R +P L+++F L
Sbjct: 16  ILKGLQYTLFVAVISMAIALVFGFILALGRMSKQAYVRIPCMLFISFNRGVPILLLLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y ++               G  LN              A
Sbjct: 76  YAALPEFGFQLSAVAAAIVGFSLNTSAYVAEVNRSALAA 114


>gi|239820275|ref|YP_002947460.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805128|gb|ACS22194.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 241

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 18/234 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +    FG   N   LS    T+           V+G  L+L     +R        A  
Sbjct: 5   WNWSGFFGYLFNPYILSGAFTTLWLTLAAIAGGLVVGCALAL-----ARLSRHDWLAAPA 59

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  F   G P LV + + Y      P LG    +          S  + L    AA+
Sbjct: 60  HFYIWVF--RGTPLLVQLIIIYT---GLPQLGLKLSV--------VESALLGLILNEAAY 106

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR G+ +VP GQ  AA A+G +  ++ R +++PQAMR IIP L +    LLK +S+
Sbjct: 107 LAEVVRGGIQSVPAGQTNAARAVGFSSAQSMRYIVMPQAMRLIIPTLGNSINGLLKTTSI 166

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +   +L+     +I +    +E+ ++    YL ++ +  +   R+      
Sbjct: 167 TSVISMEELLRRTQVLIQEKFMVLELFIVAAIYYLLMTTVWDVIQRRIERHYGR 220



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   IL G   T WL  + +    ++G  +   RLS +  +A     Y+ VFR  P LV 
Sbjct: 15  FNPYILSGAFTTLWLTLAAIAGGLVVGCALALARLSRHDWLAAPAHFYIWVFRGTPLLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +  +Y  +  +            G+ LN
Sbjct: 75  LIIIYTGLPQLGLKLSVVESALLGLILN 102


>gi|225860606|ref|YP_002742115.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|225726892|gb|ACO22743.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390343|gb|EGE88684.1| putative ABC-type amino-acid transporter permease protein
           [Streptococcus pneumoniae GA04375]
          Length = 225

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|158425754|ref|YP_001527046.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332643|dbj|BAF90128.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 219

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L  +    + + +FV G ++ L    L R    +  +   +LYI   LI
Sbjct: 4   FTTWDILRNLLLAAEWTVLLSLVAFVGGGIVGLAILFL-RTGRSRGLRRAAMLYIE--LI 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F         P + +  ++L+ +T+AF+AEI R  +
Sbjct: 61  QGTPLLMQLFLSF-----------FGLSLLGFDVPPWFAAGLSLTLWTSAFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +VPRGQ EA+ +L +T+ +  R V+LPQA+R  +PP     + ++K ++L   +GF +L
Sbjct: 110 ESVPRGQWEASASLAMTYFEQMRHVVLPQALRIAVPPTVGFSVQVVKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 170 SKASTMITNATFQPFVVYGLAALIYFALCWPLSKSSQILERKLNVAHR 217



 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 32/106 (30%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L+    T  L+    +   I+G  +   R   ++ +     +Y+E+ +  P 
Sbjct: 6   TWDILRNLLLAAEWTVLLSLVAFVGGGIVGLAILFLRTGRSRGLRRAAMLYIELIQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L+ +F  +  +  +             + L               +
Sbjct: 66  LMQLFLSFFGLSLLGFDVPPWFAAGLSLTLWTSAFLAEIWRGCVES 111


>gi|254243964|ref|ZP_04937286.1| hypothetical protein PA2G_04794 [Pseudomonas aeruginosa 2192]
 gi|126197342|gb|EAZ61405.1| hypothetical protein PA2G_04794 [Pseudomonas aeruginosa 2192]
          Length = 230

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 113/228 (49%), Gaps = 17/228 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L    LT++  A   V    L + L +   R SRH++ +      + Y   F   
Sbjct: 10  WMPKMLQGAALTLELLAIAVVAGLALALPLGIA--RASRHWYVR-----AVPYAYIFFFR 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVR 286
           G P L+ + + Y        L QF  +  S   P     +    + ++ +TAA+IAEI+R
Sbjct: 63  GTPLLLQLFIVYY------GLAQFEEVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILR 116

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +VP G++EAA ALG++ R+A   ++LP+A+R  +P  +++ + +LK S++   V  
Sbjct: 117 GAIHSVPVGEVEAARALGMSRRQALWHIILPRAVRIGLPAYSNEVIVMLKASAVVYTVTL 176

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            D++ +  TII +T +++    +   +YL ++I++      +   + +
Sbjct: 177 FDIMGMARTIIARTYESMLFFCLAGALYLVITIVLTRIFRLIERWLRV 224



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 7/208 (3%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L    ++    +   +G  R S +  V  +   Y+  FR  P L+ 
Sbjct: 10  WMPKMLQGAALTLELLAIAVVAGLALALPLGIARASRHWYVRAVPYAYIFFFRGTPLLLQ 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF---VFSFVLGIV-- 199
           +F +Y  +     +   +             L+    T    A+I    + S  +G V  
Sbjct: 70  LFIVYYGLAQFEEVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEA 129

Query: 200 -LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
             +L  +R    +H    +A+ +  +  +    +  L   A+ Y +     +      I 
Sbjct: 130 ARALGMSRRQALWHIILPRAVRIG-LPAYSNEVIVMLKASAVVYTVTLFDIMGMARTIIA 188

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +  S  F  L  AL       +  I R
Sbjct: 189 RTYESMLFFCLAGALYLVITIVLTRIFR 216


>gi|307261839|ref|ZP_07543503.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868456|gb|EFN00269.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 223

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L         K      +   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETSKQPCISKPTS---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +        ++  S     F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEKITDEYVEFS----AFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEKRFTRFER 220


>gi|317472159|ref|ZP_07931491.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|316900563|gb|EFV22545.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 225

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 105/227 (46%), Gaps = 16/227 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+  +    +    LG +L+L      R         +  +YI   +I G
Sbjct: 15  YLMYLDGLKMTLLVSLLAIILGVALGTILALMRMTAERRGKSTLLSKIAYVYID--IIRG 72

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            PT+  + + Y +                      +   +     +AA++AEI+R+G++A
Sbjct: 73  TPTVTQLLIMYFVVL--------------KGVDGLIVGTVTFGLNSAAYVAEIIRAGILA 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQME   +LGL++ +  + ++LPQA+++I+P L ++++ L+K +++   V   DL  
Sbjct: 119 VDHGQMEGGRSLGLSYGQTMKDIILPQAVKNILPALGNEFIVLIKETAILGYVSIVDLTK 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V   + ++T +A   ++    IY  +  ++ L +  +  ++   +K+
Sbjct: 179 VADFVTSRTYEAFAPLIGTAIIYYLVVKVLTLVLGAVERRLRQSDKR 225



 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 14/86 (16%)

Query: 83  SSYATAILV---------GFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWI 128
            SY  A +          G   T  ++   +I    +GT++   R++A +     L++ I
Sbjct: 3   DSYYRAFIAEQRYLMYLDGLKMTLLVSLLAIILGVALGTILALMRMTAERRGKSTLLSKI 62

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLS 154
             VY+++ R  P +  +  +Y  VL 
Sbjct: 63  AYVYIDIIRGTPTVTQLLIMYFVVLK 88


>gi|87121082|ref|ZP_01076973.1| amino acid ABC transporter, permease protein [Marinomonas sp.
           MED121]
 gi|86163574|gb|EAQ64848.1| amino acid ABC transporter, permease protein [Marinomonas sp.
           MED121]
          Length = 366

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 18/226 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                LT        V SF LG++L+L      R       K++ +++I T     L T+
Sbjct: 155 WGGLFLTTLLGVVGIVASFPLGVLLAL-----GRQSSMPIAKSVCIVFIETIRAVPLITI 209

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A    +    P    FN         + M + I ++ ++AA++AE++R GL A+P+G
Sbjct: 210 LFMASV-MIPLFLPDGMNFN---------KLMRVLIGITLFSAAYMAEVIRGGLQAIPKG 259

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA A+GLT+ ++  LV+LPQA++ +IP + + ++ L K+++L   VG  DL+     
Sbjct: 260 QYEAADAMGLTYWQSMVLVILPQALKLVIPGIVNTFIGLFKDTTLVYIVGMFDLLGRIQA 319

Query: 356 IINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             + +   G  IE      FIY +    ++ +  R+  K+    K+
Sbjct: 320 ATHDSSWLGTTIEGYAFAGFIYWAACFGMSRYSMRIERKLETGHKR 365


>gi|300790863|ref|YP_003771154.1| amino acid ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299800377|gb|ADJ50752.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 254

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 16/242 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D         +++          +     + V S ++G V+ +    +     +   +  
Sbjct: 3   DFVNTFLDWDYISQVLPDLLKTGLLNTLILSVSSALIGTVVGMVLAVMG-LSTKWWLRWP 61

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +Y   F   GLP ++ I L       + +      + G+   P      +ALS   AA
Sbjct: 62  ARIYTDIF--RGLPAILTILLI-----GQGLGTLARDVVGTNPYPM---GILALSLIAAA 111

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI RSG+ +V +GQMEA+ ALG+++ K+  LV++PQ +R ++P L +Q++ L+K+SS
Sbjct: 112 YIGEIFRSGIQSVDKGQMEASRALGMSYTKSMLLVIIPQGVRRVLPALVNQFIALVKDSS 171

Query: 340 LAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +G      +L  +G  +   TG  +  ++     +L +++ +   +N ++ K+   
Sbjct: 172 LVYVLGLLSGQRELFRIGQDLAANTGN-LSPLVAAGVFFLVITVPLTHLVNYIDKKLRTG 230

Query: 396 EK 397
            K
Sbjct: 231 RK 232



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 39/79 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +NT  L+ S  +  T++G ++    LS    + W  R+Y ++FR +P ++ I  + + 
Sbjct: 25  GLLNTLILSVSSALIGTVVGMVLAVMGLSTKWWLRWPARIYTDIFRGLPAILTILLIGQG 84

Query: 152 VLSVLPIPDHSIVLPFGMF 170
           + ++      +   P G+ 
Sbjct: 85  LGTLARDVVGTNPYPMGIL 103


>gi|104780400|ref|YP_606898.1| glutamate/aspartate ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95109387|emb|CAK14087.1| glutamate/aspartate ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 248

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      ++ + +LG +L +      R    +    +   Y+  F    +P
Sbjct: 24  WYITGLGWTIAIAISAWIIALLLGSLLGVM-----RTVPNRLVSGIATAYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +   +S+ I L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPEGLQEWFKQDLNPTTSALISVVICLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  A  A+G +  +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPRGQESAGRAMGFSLPQIYMNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMRMVEKKVAV 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A S  I A ++G+L+G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWYITGLGWTIAIAISAWIIALLLGSLLGVMRTVPNRLVSGIATAYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQEWFKQD 103


>gi|261253293|ref|ZP_05945866.1| histidine ABC transporter permease protein HisM [Vibrio orientalis
           CIP 102891]
 gi|260936684|gb|EEX92673.1| histidine ABC transporter permease protein HisM [Vibrio orientalis
           CIP 102891]
          Length = 225

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T A +   + ++G+V+++    ++R+            +I  F   G P L
Sbjct: 10  LPIYLDGLWTTAWLVGAALIIGLVVAIPLG-VARNSPNYLFNGPSWAFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  K  R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSTFKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFIILGCFKFAEKRF 217



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL  + +I   ++   +G  R S N L       ++  FR  P LV ++ +
Sbjct: 13  YLDGLWTTAWLVGAALIIGLVVAIPLGVARNSPNYLFNGPSWAFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y  +    P+ D      + 
Sbjct: 73  YYGMDQFFPVKDTLWEHAWF 92


>gi|320530705|ref|ZP_08031749.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
 gi|320136992|gb|EFW28930.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
          Length = 227

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 15/213 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +IF  +  L + L  F   L R    +    L   YI  +++ G P ++ +   Y  
Sbjct: 30  VTLEIFCVTLALSLPLGFFV-ALGRLSRSRILGRLIDFYI--WVMRGTPLMLQLLFVY-- 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F          +  + ++A     AA+ AEI R+G+ AVPRGQ EAA  LG
Sbjct: 85  ---------FALPMIGIKLSDLSAAFLAFVLNYAAYFAEIFRAGIQAVPRGQYEAARVLG 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++  A R ++LPQ +R  +PP++++ +NL+K++SL   +   DL+ V  TI+ +    +
Sbjct: 136 MSYPLALRRIILPQVLRITLPPVSNETINLVKDTSLVYILAMNDLLRVARTIVQREFD-M 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             ++I    YL+++        +L A     ++
Sbjct: 195 TPLVIAGAFYLAMTAAFTWGFKKLEAHYGRYDR 227



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +  +  +G  V  GRLS ++++  +   Y+ V R  P ++ + F+
Sbjct: 24  MLEGSTVTLEIFCVTLALSLPLGFFVALGRLSRSRILGRLIDFYIWVMRGTPLMLQLLFV 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y ++  +               LN              A
Sbjct: 84  YFALPMIGIKLSDLSAAFLAFVLNYAAYFAEIFRAGIQA 122


>gi|296110978|ref|YP_003621359.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832509|gb|ADG40390.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 213

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+ ++    V S +LG   ++      +   +K  + +  +Y+  F    L
Sbjct: 9   PTFLQGFGYTLLSSLIALVGSMILGTGFAIM-----QIVPQKWAQKIGNIYVQVFRNIPL 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +                  F  +        F S  +AL  YT+AFIAE VR+G+++V
Sbjct: 64  LIITFFF--------------FLVVSKYIKMSGFTSGTVALMLYTSAFIAETVRAGILSV 109

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQME A A GL+  +A + ++LPQA R  +P L +Q++NL+KNSS+   VG  DL+  
Sbjct: 110 DSGQMEGARANGLSFAQAMQHIVLPQAFRISLPSLGNQFINLVKNSSILAFVGGLDLMYQ 169

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +   T       +I    YL +++ ++ +M  L  K+  
Sbjct: 170 GNMVAANTFDTFSTYIIVAIFYLVITLPLSYYMQHLEQKLKR 211



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   ++ + I+GT     ++   K    I  +YV+VFRNIP L++ FF 
Sbjct: 11  FLQGFGYTLLSSLIALVGSMILGTGFAIMQIVPQKWAQKIGNIYVQVFRNIPLLIITFFF 70

Query: 149 YKSVLSVLPI 158
           +  V   + +
Sbjct: 71  FLVVSKYIKM 80


>gi|241895819|ref|ZP_04783115.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241870862|gb|EER74613.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 217

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 19/224 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L+    T+ ++    + S +LG   +L     ++  +        +  I   ++  +P 
Sbjct: 12  FLTGFGWTIASSILALIGSLILGTAFALMEVVPNKLVNI-------IGRIYIEVVRNIPL 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV+    Y +            I        F +    L+ YT+AFIAE VR+G+ AVP+
Sbjct: 65  LVITMFFYVV------------IANVIKISGFAAGTFGLTLYTSAFIAETVRAGINAVPK 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+E A++ GL+  +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+    
Sbjct: 113 GQLEGAMSNGLSWWQGMRYIVLPQAFKLVIPPLGNQFINLIKNSSVLAFVAGLDLMYQAN 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            I   T       +I    YL L++ ++ +M  L  ++     +
Sbjct: 173 QISQMTFDTFGPFIIVGIFYLILTMPMSYYMRYLETRLEKNGGR 216



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/75 (37%), Positives = 40/75 (53%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+A   L GF  T   +   +I + I+GT      +  NKLV  I R+Y+EV RNIP L
Sbjct: 6   QSHAGEFLTGFGWTIASSILALIGSLILGTAFALMEVVPNKLVNIIGRIYIEVVRNIPLL 65

Query: 143 VVIFFLYKSVLSVLP 157
           V+  F Y  + +V+ 
Sbjct: 66  VITMFFYVVIANVIK 80


>gi|255656164|ref|ZP_05401573.1| amino-acid ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
 gi|296450402|ref|ZP_06892158.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296879475|ref|ZP_06903469.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296260663|gb|EFH07502.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296429621|gb|EFH15474.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 222

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 15/199 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG++L+ F    S     K  + +  +Y+S F   G P L+ I   Y   F  P++  F
Sbjct: 36  LLGVILAFFTQTKS-----KILQYITRVYVSFF--RGTPLLIQIFFFY---FGFPMVFSF 85

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                      ++++ I L   ++A++AEI+R+ + +V +GQ EA  A GL+  ++   +
Sbjct: 86  -----MKDCSPYLAIVICLGVNSSAYMAEIIRASIESVDKGQQEACYAFGLSKYQSMVKI 140

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA  S +PP+ S  L+++K SSL + +G  DL+ V       + +  EI ++ + IY
Sbjct: 141 ILPQAATSAVPPIVSCTLDIIKGSSLGLTIGIQDLMGVAQVEAASSFKYFEIYMVTILIY 200

Query: 375 LSLSIMIALFMNRLNAKIA 393
            ++SIM++   +++  +I 
Sbjct: 201 WAVSIMLSNIQSKVEKRIG 219



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++     T  ++      + ++G ++     + +K++ +I RVYV  FR  P L+ IFF 
Sbjct: 16  LIKALGITILISIIAFFISILLGVILAFFTQTKSKILQYITRVYVSFFRGTPLLIQIFFF 75

Query: 149 YKSVLSVLPIPDH 161
           Y     V      
Sbjct: 76  YFGFPMVFSFMKD 88


>gi|199599468|ref|ZP_03212860.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
 gi|199589640|gb|EDY97754.1| ABC-type amino acid transport/signal transduction system,
           periplasmic component/domain [Lactobacillus rhamnosus
           HN001]
          Length = 488

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 17/222 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  +     TM        F+ ++GI++             K  + +   +I  F   G
Sbjct: 283 WSTLMGGLRETMVLTIVAIFFATLVGILIGFLG-----VIPNKLCQGIATTFIYIF--RG 335

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           LP +VL    Y      P L         +  P F++  + L+    A+ A  V+ G+ A
Sbjct: 336 LPLMVLALFIYT---GVPSLIG-------SKVPAFIAGIVTLTLNEGAYTAAFVKGGIQA 385

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEAA +LGL   KA R V+LPQ ++ +IP   +Q++  LK++S+   +G  +L  
Sbjct: 386 VDPGQMEAARSLGLPFGKAMRKVILPQGIKIMIPSFINQFIITLKDTSILSIIGLLELTQ 445

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            G  II +  +  +I  +   IYL +  ++    N +  K+ 
Sbjct: 446 TGKIIIARNMEGFKIWTMVALIYLIIITLLTWLSNWVQKKVK 487



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            + ++ G   T  L    +  AT++G L+G   +  NKL   I   ++ +FR +P +V+ 
Sbjct: 283 WSTLMGGLRETMVLTIVAIFFATLVGILIGFLGVIPNKLCQGIATTFIYIFRGLPLMVLA 342

Query: 146 FFLYKSVLSV 155
            F+Y  V S+
Sbjct: 343 LFIYTGVPSL 352


>gi|170016504|ref|YP_001727423.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
 gi|169803361|gb|ACA81979.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
          Length = 213

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 31/213 (14%)

Query: 187 AKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               V S +LG   ++         R   + + +  + +PLL I+ F    +   V    
Sbjct: 23  LIALVGSMILGTAFAIMQIVPKKWVRKVGNVYVQVFRNIPLLIITFFFFLVVSKYV---- 78

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                                    FMS  IAL  YT+AFIAE VR+G++++  GQME A
Sbjct: 79  ---------------------KMSGFMSGTIALMLYTSAFIAETVRAGILSIDGGQMEGA 117

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A GL+  +A + ++LPQA R  +P L +Q++NL+KNSS+   VG  DL+  G  I   T
Sbjct: 118 RANGLSFAQAMQYIILPQAFRVALPSLGNQFINLVKNSSILAFVGGLDLMYQGNMIAANT 177

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +     +I   +YL +++ ++ +M  L  K+ 
Sbjct: 178 FETFSTYIIVGILYLIITLPLSYYMQHLERKLK 210



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GF  T   +   ++ + I+GT     ++   K V  +  VYV+VFRNIP L++ FF 
Sbjct: 11  FMQGFGYTLLSSLIALVGSMILGTAFAIMQIVPKKWVRKVGNVYVQVFRNIPLLIITFFF 70

Query: 149 YKSV 152
           +  V
Sbjct: 71  FLVV 74


>gi|149021568|ref|ZP_01835623.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|147930264|gb|EDK81249.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
          Length = 225

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + V SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAVGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPFYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAVGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +           
Sbjct: 77  FYGLPLISDHIIMIPFYW 94


>gi|33603521|ref|NP_891081.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33577645|emb|CAE34910.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 253

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 8/241 (3%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P G       L+    T+ T A  ++ +  +GIV+ +     +R    K
Sbjct: 4   NWNWHIFLEMSPTGGIYLGTLLTGMAWTLGTAALAWILALGIGIVVGV-----ARTTQSK 58

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
             + +   Y+  F    +P LV + L Y +     PV               F+   + L
Sbjct: 59  WARIMGATYVEFF--RNIPLLVQMFLWYFVVPEILPVQLGDAIKSIPPPWGIFIPAVLCL 116

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             YT++ +AE VR+G+ + P GQ  AA ALG+   +  R VLLP + R I+PPLTS+ LN
Sbjct: 117 GFYTSSRVAEQVRAGIESRPAGQRMAATALGMRPSQVYRYVLLPTSFRIILPPLTSELLN 176

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+KN+S+A  +G  +LV    ++   + Q  E        Y  L++++   M  +  ++A
Sbjct: 177 LIKNTSVAFTIGLLELVGAARSMQEFSFQVFEAFAGATLCYFLLNLIVLRAMRYIETRLA 236

Query: 394 L 394
           +
Sbjct: 237 V 237



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T   A    I A  IG +VG  R + +K    +   YVE FRNIP LV 
Sbjct: 20  YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARIMGATYVEFFRNIPLLVQ 79

Query: 145 IFFLYKSVLSVLP 157
           +F  Y  V  +LP
Sbjct: 80  MFLWYFVVPEILP 92


>gi|322412435|gb|EFY03343.1| Amino acid ABC transporter permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 267

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+       VF  +L +
Sbjct: 2   TSVFLTSGWAWYDQLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLAGAVFGLILAL 61

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + ++      +  +       P+  +    + G P LV + L Y     F K +  ++ F
Sbjct: 62  IFAIVKINKVKILY-------PIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 114

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+   +  R V++
Sbjct: 115 DWNINAIPASVFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMNSVQVYRRVII 174

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA +    +L +    +     +  E  +    +Y S
Sbjct: 175 PNAAVVAIPTLINGLIGLTKGTSLAFSASIVELFAQAQILGGSDYRYFERYISVALVYWS 234

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI+I      +  ++A+K
Sbjct: 235 ISILIEQVGRLIENRMAIK 253


>gi|298346439|ref|YP_003719126.1| polar amino acid ABC transporter membrane subunit [Mobiluncus
           curtisii ATCC 43063]
 gi|298236500|gb|ADI67632.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane subunit [Mobiluncus curtisii ATCC 43063]
          Length = 303

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 22/218 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKT-----------GKALPLLYISTFLIFGLPTL 235
             + + + +LG V+      L+   H  T            + +  +Y+  F   G P +
Sbjct: 28  VLLAIIATLLGCVIGFACGILNTIPHPSTDPLHKRVVLAIIRGIIRVYVEVF--RGTPMI 85

Query: 236 VL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +  + + Y L +      QF  + G ++          +S  T A+IAE VR G+I+V  
Sbjct: 86  LQAVFIYYGLPYFTNNALQFQSMWGVSIF--------VVSINTGAYIAESVRGGIISVDP 137

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E A A+G+TH +    V+LPQA+R+++P + + ++  +K++S+   +GF++  SV  
Sbjct: 138 GQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIKDTSVMFIIGFSEFFSVHK 197

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +     +      I M  YL+L+++ +  + +L  KI
Sbjct: 198 MVSGAVFKYFPSATIEMVGYLTLTLLSSFLLRKLEKKI 235



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 33/99 (33%), Gaps = 12/99 (12%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK------------LVAWICRVY 132
           Y    L G VNT  LA    +   +IG   G      +             ++  I RVY
Sbjct: 16  YGGVYLTGIVNTVLLAIIATLLGCVIGFACGILNTIPHPSTDPLHKRVVLAIIRGIIRVY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           VEVFR  P ++   F+Y  +            +      
Sbjct: 76  VEVFRGTPMILQAVFIYYGLPYFTNNALQFQSMWGVSIF 114


>gi|222081097|ref|YP_002540460.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725776|gb|ACM28865.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 223

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 17/214 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +A   V     GIVL L           +     P+  + T +I        +   +  
Sbjct: 27  LSAASIVAGLCFGIVLVLM----------RLSSNKPISIVGTAIIEFYRNTPPLVHFFWY 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P+L   +          F++ +IALS  + AF AE+ R G+I++ RGQ EAA ALG
Sbjct: 77  FYGLPILIGVSL-------DPFVAAWIALSIQSGAFFAEVFRGGIISIERGQWEAARALG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +  R ++LPQA+R +IPPL  +   L+K +SLA  + + DLV     + +QT + +
Sbjct: 130 MRGGRIMRRIILPQALRRMIPPLMERSFELVKTTSLAATLAYGDLVYQAMVVTSQTYRPL 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E       ++ S+  + +L M  + A++A   K+
Sbjct: 190 ETYTTVAVLFFSVLFVASLGMRAVEARLARYHKR 223



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 63/160 (39%), Gaps = 2/160 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T     A  +L G  NT  L+ + ++     G ++   RLS+NK ++ +    +E +R
Sbjct: 6   DFTPIRMNAGLLLEGLGNTLLLSAASIVAGLCFGIVLVLMRLSSNKPISIVGTAIIEFYR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N PPLV  F+ +  +  ++ +     V  +       G  F  +       I    +   
Sbjct: 66  NTPPLVHFFWYFYGLPILIGVSLDPFVAAWIALSIQSGAFFAEVFRGGIISIERGQWEAA 125

Query: 198 IVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTL 235
             L +   R+ R     +   + +P L   +F +    +L
Sbjct: 126 RALGMRGGRIMRRIILPQALRRMIPPLMERSFELVKTTSL 165


>gi|194017115|ref|ZP_03055727.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
 gi|194010983|gb|EDW20553.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
          Length = 237

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 9/239 (3%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +I +PF +      L     T+         S ++G V +       R F     + L 
Sbjct: 2   QTIDIPFAIDQVPLILKGVPFTLLIALVSMAVSLMIGSVFAFI-----RLFRIPVLRQLV 56

Query: 221 LLYISTFLIFGLPTLVLIA-LKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            LY+S F   G P +V +    Y L F    V   F       +        I  S ++A
Sbjct: 57  TLYVSFF--RGTPLIVQLFAFFYGLPFVLTKVNDTFGLTFHPDMVSPLAVALITFSLHSA 114

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E+VRS L+AV +GQ+EAA  +G+T R+A   ++LPQA    +P L +Q + LLK +
Sbjct: 115 AHLTEVVRSALLAVDKGQLEAAKIVGMTTRQAMMRIILPQAFVVALPNLGNQLIQLLKAT 174

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SL+  +G  +++ +   I N   Q +E  L+   IY  LSI   L    L  ++++  +
Sbjct: 175 SLSFTIGVLEIMGISRIIANDGYQFLETYLVSALIYWLLSIFFELAFALLEKRVSVYGR 233



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 36/79 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +A   M  + +IG++    RL    ++  +  +YV  FR  P +V +F  
Sbjct: 16  ILKGVPFTLLIALVSMAVSLMIGSVFAFIRLFRIPVLRQLVTLYVSFFRGTPLIVQLFAF 75

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           +  +  VL   + +  L F
Sbjct: 76  FYGLPFVLTKVNDTFGLTF 94


>gi|33598572|ref|NP_886215.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33574701|emb|CAE39358.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis]
          Length = 228

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 1/209 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  VF+  L  + +     L           +  L  +   + GL  L LI + + 
Sbjct: 15  YLFRDGMVFTLKLTFLSTAMGLALGTLLAMCRLSGIRPLSAAAAYVNGLRALPLILVIFW 74

Query: 244 LHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +F  P +G +    G  +    F S  I  + + AA+  EI+R+G+ ++PRGQ  AA A
Sbjct: 75  FYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEAAYFCEIMRAGIQSIPRGQTSAAYA 134

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GL + +    V+LPQA+R++ P L +Q + L +++SL   +   D +  G  +  +  +
Sbjct: 135 IGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDTSLVYVLSLTDFLGAGINVAQRDNR 194

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +E+ L    +Y  +S   + F++ L  +
Sbjct: 195 LVEMYLFVAAVYFVMSFAASRFVHYLQQR 223


>gi|298717428|ref|YP_003730070.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361617|gb|ADI78398.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 308

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 11/268 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    ++ +F L   + SV   P     +    F +   L     T+       +FS   
Sbjct: 17  RTAGAILALFILAGVIQSVAFNPRWEWGVFARWFFDPVILHGLGQTLLLTLLGTIFSLFF 76

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--- 253
           G +L+L     +R         L   YI  F    L  +++I   +   +D   +G    
Sbjct: 77  GGLLAL-----ARLSSSWLLSTLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSIGIPFT 131

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              +       V  +F +  I L+   AA+ AEI+R G++ V  GQ+EAA ALGL+  + 
Sbjct: 132 GLSWGAFQTINVLGQFPAAVIGLTLVQAAYSAEIIRGGILGVDHGQVEAASALGLSASRR 191

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           T  ++LPQA+R+IIP   ++ ++L K +S+   +   +L      I N+  + I ++++ 
Sbjct: 192 TFRIILPQALRAIIPTAFNEIISLAKGTSMVYVLAMPELFYTIQMIYNRNQEVIPLLMVG 251

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              YL ++ ++++    +   +A    +
Sbjct: 252 AAWYLIITTVLSVIQYYVERWLARSVNR 279


>gi|153011394|ref|YP_001372608.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563282|gb|ABS16779.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 218

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 12/226 (5%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
             F          L        F    VL  +       L R    K      +  +  F
Sbjct: 5   WDFSGLWQYRGLFLQGLAYTVGFTIITVLSGIFVGTVFALGRLSGNKIITVPIMTVVEIF 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
                P LV +   Y   +  P+L  F            M+ +I L+ Y AAF AEI+R 
Sbjct: 65  --RCTPVLVQLVWCY---YALPMLIGFEI-------SPAMAAFITLTFYGAAFYAEIIRG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++++  GQ +A  A+G+   +    ++LPQA+R ++PPL +Q +  LKN+SL   +   
Sbjct: 113 GIVSIDAGQWDAGRAIGMRRGQLMGKIILPQALRRMVPPLVNQSVLQLKNTSLLSVLAVP 172

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL+  G  + + T + +E   +   +YL++   +    + L  ++ 
Sbjct: 173 DLLYQGQLVTSATYRPLETYTLIAVLYLAVLFPLTRLAHGLEGRLK 218



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    Y    L G   T       ++    +GT+   GRLS NK++       VE+FR
Sbjct: 6   DFSGLWQYRGLFLQGLAYTVGFTIITVLSGIFVGTVFALGRLSGNKIITVPIMTVVEIFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
             P LV + + Y ++  ++       +  F
Sbjct: 66  CTPVLVQLVWCYYALPMLIGFEISPAMAAF 95


>gi|90578868|ref|ZP_01234678.1| Putative arginine ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90439701|gb|EAS64882.1| Putative arginine ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 220

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   S  +G+VL++           +  +   + + +T L+  L  L  + +   +
Sbjct: 1   MTVQLAFTSLAVGLVLAMLFA------GGEMSRFRFVAWPTTALVTVLRGLPELLIVLFI 54

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F    +  F   G       F+S  IALS   A++ A+ +R  + AVP+GQ EAA ALG
Sbjct: 55  FFGSGQI-LFYITGDYIEISPFLSGVIALSLIFASYAAQTIRGAIKAVPKGQREAASALG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    +++PQA+R  +P LT+Q+L LLK+++L   +G  DL+         T ++ 
Sbjct: 114 ISKARTFVAIIIPQAIRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLSSAATHESF 173

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                   +YL ++++    + R++AK +++E
Sbjct: 174 TWYATAAAVYLVITLITQQIIKRIDAKYSVQE 205


>gi|107026631|ref|YP_624142.1| glutamine ABC transporter permease protein [Burkholderia
           cenocepacia AU 1054]
 gi|116692179|ref|YP_837712.1| glutamine ABC transporter permease protein [Burkholderia
           cenocepacia HI2424]
 gi|105896005|gb|ABF79169.1| L-glutamine ABC transporter membrane protein [Burkholderia
           cenocepacia AU 1054]
 gi|116650179|gb|ABK10819.1| L-glutamine ABC transporter membrane protein [Burkholderia
           cenocepacia HI2424]
          Length = 235

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 11/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LI 229
            +   +      +    ++ VF  +LG+V       ++  F     KA+ +L      LI
Sbjct: 20  FDWSAIWAALPDLMDGVRLTVFIALLGLVGGFIVGMIAGMFRAYGPKAMNVLAQVYIELI 79

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V +     L+F  P+L      G         +  IA++  + A++AE+VR  L
Sbjct: 80  RGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGAL 129

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+G  EA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +G  +L
Sbjct: 130 LSIPKGLTEAGLAMGLSMPRVLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGEL 189

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              G  II    QA+EI      IYL L+  + L +  +  ++ +
Sbjct: 190 TRKGQEIIAGNFQAVEIWSAVAVIYLILTGAMTLTLRIVEKRMRI 234


>gi|315300935|gb|EFU60155.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
          Length = 347

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 75/339 (22%), Positives = 135/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPYRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y   L +  +                     T
Sbjct: 105 -----------YIAVWAVIYPLIVWWLMYGGFLGLERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV++PQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVIMPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 344


>gi|188583628|ref|YP_001927073.1| polar amino acid ABC transporter inner hypothetical protein
           [Methylobacterium populi BJ001]
 gi|179347126|gb|ACB82538.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium populi BJ001]
          Length = 240

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 18/256 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           + + +   +   P P+ +      +      LS    T+ T    ++ +F LG V+ +  
Sbjct: 1   MTYTWNWGIFFEPSPEGAGTYADML------LSGLAWTVATALCSWIIAFALGSVVGVM- 53

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R    +   A+   Y+  F    +P LV + L Y   F  P L   +        P
Sbjct: 54  ----RTLPSRAANAVGAAYVEGF--RNVPLLVQMFLWY---FVLPELLPRDLGTAVKQMP 104

Query: 265 --EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  + L  +TAA +AE VR+GL ++PRGQ +AA+ALGLT  +  R VLLP A R 
Sbjct: 105 DAPFYTAVLCLGFFTAARVAEQVRAGLRSLPRGQAQAALALGLTRAQTYRHVLLPNAYRI 164

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+PPLTS++LN LKN+S+A+ +G  +L +    +   + Q  E       +Y++L++++ 
Sbjct: 165 ILPPLTSEFLNNLKNTSVALTIGLLELTARARAMQEFSFQVFEAFTAATLLYVALNLVVI 224

Query: 383 LFMNRLNAKIALKEKK 398
                L  ++A+   +
Sbjct: 225 AGATLLERRVAVPGGR 240



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 37/77 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA  +L G   T   A    I A  +G++VG  R   ++    +   YVE FRN+P 
Sbjct: 18  AGTYADMLLSGLAWTVATALCSWIIAFALGSVVGVMRTLPSRAANAVGAAYVEGFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPI 158
           LV +F  Y  +  +LP 
Sbjct: 78  LVQMFLWYFVLPELLPR 94


>gi|121608891|ref|YP_996698.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553531|gb|ABM57680.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 243

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 5/207 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   S  +G  L++    L+R+           LY   F   G P LV + + Y  
Sbjct: 31  LTLELLSISSAIGFALAVPL-ALARNSSNWLLSRSVWLYTGLF--RGTPLLVQLFMLYYG 87

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P + +        +   +    +A +  TAA+IAEI+   +   P G++EAA +LG
Sbjct: 88  LAQWPWIRE--SWAWPYLREAYGCAILAFTLNTAAYIAEILAGQIRNTPHGEVEAARSLG 145

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + H    R ++LP A+R  +P  +++ + L+  +S+A  V  ADL  +   I  +T    
Sbjct: 146 MNHWLLLRRIVLPSALRRALPAYSNEVIMLMHATSVASLVTLADLTGIARQIYAETYNPF 205

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E  LI    YL L+  +A    R+   
Sbjct: 206 EPFLIAGIFYLVLTNALAWIFRRMEKH 232



 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L          +   +   R S+N L++    +Y  +FR  P LV +F LY  
Sbjct: 28  GLVLTLELLSISSAIGFALAVPLALARNSSNWLLSRSVWLYTGLFRGTPLLVQLFMLYYG 87

Query: 152 VLSVLPIPDHSIVLPF 167
            L+  P    S   P+
Sbjct: 88  -LAQWPWIRESWAWPY 102


>gi|325686938|gb|EGD28962.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 286

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 110/268 (41%), Gaps = 16/268 (5%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV   +   ++    Y+  L  +P       L          L    +T+   A   VF 
Sbjct: 15  EVIMVVTTYLLTTGWYEEFLKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFG 73

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251
            +L +V ++      +  +       P+       + G P LV + L Y   F  P+L  
Sbjct: 74  ILLAMVFAIVKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLK 123

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               ++         P  +   +A +   AA+ +E +R+ ++AV  G++EAA +LG+T++
Sbjct: 124 AINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILAVDPGEIEAARSLGMTNK 183

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++P A     P L +  + L K +SLA + G  ++ +    I     +  E  +
Sbjct: 184 QVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFI 243

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               IY +++I+I      +   + +K+
Sbjct: 244 SVSLIYWAVNILIEQLGRWIEKMMDIKQ 271


>gi|157691099|ref|YP_001485561.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157679857|gb|ABV61001.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 225

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 14/218 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
             F    +     I   S   G +L  F   L+R  +         LYIS   + G+P L
Sbjct: 19  FPFVMKGIWLTLLISFVSMFFGTILGFFI-ALARMANTWMLWLPARLYISF--MRGVPIL 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ + Y           F F           +  I  S  +AA+IAEI R+ L +VP G
Sbjct: 76  VILFILY-----------FGFPYIGIEFTAVTAAIIGFSFNSAAYIAEINRAALSSVPSG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA +LGL++ +  R V+LPQ++R  +PPL +  L+L+K SSLA  +   +L      
Sbjct: 125 QVEAAKSLGLSYWQTMRGVILPQSVRIALPPLANIMLDLIKASSLAAMITVPELFQQAKI 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  +    + + ++   IY  +  +++L  + L  + A
Sbjct: 185 VGGREFDYMTMYILVALIYWGICSVVSLLQDFLEKRYA 222



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  ++F  M   TI+G  +   R++   ++    R+Y+   R +P LV++F LY
Sbjct: 23  MKGIWLTLLISFVSMFFGTILGFFIALARMANTWMLWLPARLYISFMRGVPILVILFILY 82

Query: 150 KSVLSVLPIPDHSIVLPFGMFLN 172
                +            G   N
Sbjct: 83  FGFPYIGIEFTAVTAAIIGFSFN 105


>gi|172062639|ref|YP_001810290.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171995156|gb|ACB66074.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 229

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +  K L   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVETVKLAVLSLAASLVLGLVGAS-AKLSTNRVLKWLGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +        +              F++  I L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNMATDALGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMGGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 188 TLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 226



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  LA   +  + ++G +  + +LS N+++ W+   Y  + R +P LV+
Sbjct: 6   FGPLLWAGTVETVKLAVLSLAASLVLGLVGASAKLSTNRVLKWLGTFYTTLIRAVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+  +
Sbjct: 66  MLLLFYGI 73


>gi|260889729|ref|ZP_05900992.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
 gi|260860335|gb|EEX74835.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
          Length = 218

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 +FS  LGI+ +L  T  ++              + T++  G P ++ + + Y  
Sbjct: 21  LYIFTVLFSIPLGILGALAYTGKNKIVKFIIS-------VYTWIFRGTPLMLQLMVVYY- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +   NF G   V   +M+  I      AA++ EI+RSG+ ++ +GQ EAA  LG
Sbjct: 73  -----GIPLMNFGGYKIVLAPYMAATITFIINYAAYLVEIMRSGIESIDKGQHEAAKVLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            ++ +    V+LPQA+R ++P L ++ + L+K++SL   +   +++     + N     +
Sbjct: 128 YSYWQKIIYVILPQAIRRVLPTLGNEAITLIKDTSLVYVLAVTEVMKRTKELANIYYN-V 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +  + IYL LS  +      +  +  ++
Sbjct: 187 TPYICAIIIYLVLSFAVDRIFKNIEKRNKIR 217


>gi|257092717|ref|YP_003166358.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045241|gb|ACV34429.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 226

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L F    M  + +I + + V GIV       L R             Y
Sbjct: 1   MHDFDWSSIPNALPFLWDGMKISLEITLSAVVFGIVWGTLL-ALMRLSSVTPLSWFAAGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L     +   F F  GS +     S     + + AA+ +E
Sbjct: 60  VNLFRAVP---LVMVLLWFFLIVPHLLESIFGFPRGSDMR--LSSAIAGFALFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +VP+GQM AA ALG+T+ +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSVPKGQMAAASALGMTYGQAMRLVVLPQAFRNMVPLLLTQGIILFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              AD       + ++ G+ +E++L    +Y  +    +  +     K+ 
Sbjct: 175 SALADFFGAAYKVGDRDGRLVELLLFAGAVYFVICFTASRIVRYYQNKLK 224



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 38/78 (48%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S  +    +  G   +  +  S ++   + GTL+   RLS+   ++W    YV +FR
Sbjct: 5   DWSSIPNALPFLWDGMKISLEITLSAVVFGIVWGTLLALMRLSSVTPLSWFAAGYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
            +P ++V+ + +  V  +
Sbjct: 65  AVPLVMVLLWFFLIVPHL 82


>gi|152984787|ref|YP_001351211.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959945|gb|ABR81970.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 230

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 111/224 (49%), Gaps = 9/224 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L    LT++  A   V    L + L +   R SRH++ +      L Y   F   
Sbjct: 10  WMPKMLQGAALTLELLAIAVVAGLALALPLGIA--RASRHWYVR-----ALPYAYIFFFR 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + Y        + +  F     +   +    + ++ +TAA+IAEI+R  + 
Sbjct: 63  GTPLLLQLFIVYYGLAQFEEVRKSAF--WPYLRDPYWCALLTMTLHTAAYIAEILRGAIH 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP G++EAA ALG++ R+A   ++LP+A+R  +P  +++ + +LK S++   V   D++
Sbjct: 121 SVPVGEVEAARALGMSRRQALWHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTLFDIM 180

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  TII +T +++    +   +YL ++I++      +   + +
Sbjct: 181 GMARTIIARTYESMLFFCLAGALYLVITIVLTRIFRLIERWLRV 224



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 7/208 (3%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L    ++    +   +G  R S +  V  +   Y+  FR  P L+ 
Sbjct: 10  WMPKMLQGAALTLELLAIAVVAGLALALPLGIARASRHWYVRALPYAYIFFFRGTPLLLQ 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF---VFSFVLGIV-- 199
           +F +Y  +     +   +             L+    T    A+I    + S  +G V  
Sbjct: 70  LFIVYYGLAQFEEVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEA 129

Query: 200 -LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
             +L  +R    +H    +A+ +  +  +    +  L   A+ Y +     +      I 
Sbjct: 130 ARALGMSRRQALWHIILPRAVRIG-LPAYSNEVILMLKASAVVYTVTLFDIMGMARTIIA 188

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +  S  F  L  AL       +  I R
Sbjct: 189 RTYESMLFFCLAGALYLVITIVLTRIFR 216


>gi|86360891|ref|YP_472778.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284993|gb|ABC94051.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 219

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L       + + SFV G ++ L    L R    K  + L   YI  F  
Sbjct: 4   FTLWDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFL-RISRRKPPRVLAKYYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F         P +++  +AL  ++AAF+ EI R  +
Sbjct: 61  QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV +GQ EA+ +LG+   +  R V+LPQA+R  IPP     + ++K ++L   +GF +L
Sbjct: 110 EAVAKGQWEASASLGMGRLQQMRYVILPQALRIAIPPTVGFSVQIIKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 170 SKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 217



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    +   ++G  +   R+S  K    + + Y+E+F+  P L
Sbjct: 7   WDILRNLLLATRWTVLLSLVSFVGGGMVGLCLLFLRISRRKPPRVLAKYYIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F  +  +          +     + L +             A  
Sbjct: 67  MQLFIAFFGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCVEAVA 113


>gi|288962138|ref|YP_003452433.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288914404|dbj|BAI75889.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 405

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 14/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+       +     +     + VFS  L   LS+    L R       +   + +I
Sbjct: 180 MWGGVAGLGYVPNDRWGGLPITLMLSVFSIALAFPLSILL-ALGRQSALPAIRTFCVGFI 238

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T        LV +     + F         F+       + +     ++ +TAA++AE 
Sbjct: 239 ETMRGVP---LVSVLFMASVMFPL-------FLPEGVTVDKLLRALAGMTLFTAAYLAEA 288

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL A+P+GQ EAA ALGL++ + T L++LPQA+R +IPP+ +Q+++  K++SL   V
Sbjct: 289 VRGGLQAIPKGQYEAADALGLSYWQKTMLIVLPQALRIVIPPIVNQFISAFKDTSLVTIV 348

Query: 345 GFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  DL++                E+ +    ++      ++ +   L        ++
Sbjct: 349 GLYDLLTAATVATTDPEWRPYFAEVYVFAGLMFWIFCFSMSRYSQWLERLANRYTRR 405



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y  +  +      G   T  L+   +  A  +  L+  GR SA   +   C  ++E  R 
Sbjct: 189 YVPNDRWG-----GLPITLMLSVFSIALAFPLSILLALGRQSALPAIRTFCVGFIETMRG 243

Query: 139 IPPLVVIFFLYKSVLSVLPI 158
           +P + V+F         LP 
Sbjct: 244 VPLVSVLFMASVMFPLFLPE 263


>gi|197337095|ref|YP_002157986.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11]
 gi|197314347|gb|ACH63796.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11]
          Length = 264

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 19/244 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD       G +     +    +T+  +A   + +  + ++ +L      
Sbjct: 36  MNYQWQWDRVPDFIFFYEDGEWFPAELIEGLLVTLKISAISAIATLTIALITALL----- 90

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  +   GK +  LYI   LI   P LV I L Y +             G       F +
Sbjct: 91  RLSNSIVGKTISTLYIE--LIRNTPLLVQIYLLYFVF------------GPFLGLDRFTT 136

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AEI+RSGLI +P+GQ EA   LGL+   + R V+LPQ +R  +P LT
Sbjct: 137 AVLALALFQGAYTAEILRSGLINLPKGQFEACKTLGLSQFNSYRYVVLPQVIRKTLPSLT 196

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I++ T    EI      IYL +++ ++     L
Sbjct: 197 NELVSLVKNSSIVSVMAIFDLTTEGRNIVSDTAMPFEIWFTVAAIYLMITLSLSALSAWL 256

Query: 389 NAKI 392
             ++
Sbjct: 257 EYRM 260



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  ++    I    I  +    RLS + +   I  +Y+E+ RN P LV I+ L
Sbjct: 62  LIEGLLVTLKISAISAIATLTIALITALLRLSNSIVGKTISTLYIELIRNTPLLVQIYLL 121

Query: 149 YKSV 152
           Y   
Sbjct: 122 YFVF 125


>gi|27378208|ref|NP_769737.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351355|dbj|BAC48362.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 264

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 8/229 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            G    +  LS    T+      +  +F +GIV+ +      R    +   AL  LY+  
Sbjct: 11  DGQRYIDWLLSGLGWTLALAFFGWWIAFAIGIVVGI-----GRTVQNRAIAALARLYVEI 65

Query: 227 FLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           F    +P L  + L Y  L    PV               F+   + L  YTAA IAE V
Sbjct: 66  F--RNIPVLAQMFLWYFVLPEILPVTLGNAIKQIPPPWGSFVPALLCLGLYTAARIAEQV 123

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ A+PRGQ EAA ALGLT     R +++PQA+R I+P LTS+ + + KN+S+A+ +G
Sbjct: 124 RAGIEALPRGQTEAASALGLTAYLTYRHIIVPQALRLIVPSLTSEVMGIYKNTSVALTIG 183

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +L +    I   T Q          IYL+L+++    M  ++  + +
Sbjct: 184 LMELTAQARQISEATFQTFTAFGAATLIYLALALIAYQGMALIDRAVRI 232



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/77 (40%), Positives = 41/77 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
               Y   +L G   T  LAF G   A  IG +VG GR   N+ +A + R+YVE+FRNIP
Sbjct: 11  DGQRYIDWLLSGLGWTLALAFFGWWIAFAIGIVVGIGRTVQNRAIAALARLYVEIFRNIP 70

Query: 141 PLVVIFFLYKSVLSVLP 157
            L  +F  Y  +  +LP
Sbjct: 71  VLAQMFLWYFVLPEILP 87


>gi|158313074|ref|YP_001505582.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EAN1pec]
 gi|158108479|gb|ABW10676.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EAN1pec]
          Length = 290

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 20/236 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             V      L          T+   A   V +  +G  L+       R            
Sbjct: 50  WSVFFDEPDLRTLLWEGLLDTLRAAATGMVLAVAVGTALAFARQSNRRLVSIPA------ 103

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T ++  L  L L+ L +  +   P L              F +L I L+ Y  A +
Sbjct: 104 ----TAVVEMLRGLPLLMLIFFAYLGLPQL--------GINLSAFWALVIGLTAYNGAVL 151

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI R+G+ ++ +GQ EAA ALGL   +   L+  PQA+R + P L SQ + LLK++SL 
Sbjct: 152 SEIFRAGIQSIDKGQTEAAAALGLRGTQIFTLIQFPQAVRRMSPTLVSQLVTLLKDTSLG 211

Query: 342 VAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +G+ +L+  G + +   G   A+ +  +   +Y+ ++  ++L    L  + A +
Sbjct: 212 FVIGYTELLRQGRSAVEFLGGRYALPVYTVLAVMYIIVNFSLSLTARWLERRQARR 267



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G ++T   A +GM+ A  +GT +   R S  +LV+      VE+ R +P L++IFF 
Sbjct: 63  LWEGLLDTLRAAATGMVLAVAVGTALAFARQSNRRLVSIPATAVVEMLRGLPLLMLIFFA 122

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +         L  G+   N
Sbjct: 123 YLGLPQLGINLSAFWALVIGLTAYN 147


>gi|262089613|gb|ACY24711.1| ABC ectoine/hydroxyectoine transporter EhuC permease protein
           [uncultured organism]
          Length = 219

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 12/215 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++  +  +L IV ++ A  L R    +  +   ++YI  F   G   LV +   Y 
Sbjct: 13  WVTIQVTFWGSLLAIVSAVLA-ALGRLSPIRPLRWFSIVYIEIF--RGTSLLVQLFWLYF 69

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +    P   +            F    + L  +  A+ AE++R  + +V +GQ EAA AL
Sbjct: 70  VLPMPPFNIE---------MSAFTVAIVGLGLHIGAYGAEVMRGAIRSVAKGQYEAAQAL 120

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            +T       ++LPQA+ + IPP T+  + LLKN+SL   +  +DL      +   T   
Sbjct: 121 NMTPFTRFNRIILPQALLAAIPPGTNLLIELLKNTSLVSLITLSDLAFRARQLDQATFMT 180

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +EI  + + +Y  ++  I L M  L  +++    +
Sbjct: 181 LEIFAMALLLYFVMAQAINLAMRMLERRLSRGRMR 215



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 34/72 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F G + A +   L   GRLS  + + W   VY+E+FR    LV +F+L
Sbjct: 8   LLQGAWVTIQVTFWGSLLAIVSAVLAALGRLSPIRPLRWFSIVYIEIFRGTSLLVQLFWL 67

Query: 149 YKSVLSVLPIPD 160
           Y  +       +
Sbjct: 68  YFVLPMPPFNIE 79


>gi|290580110|ref|YP_003484502.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254997009|dbj|BAH87610.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 240

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 11/215 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +          ++ VF+ +L ++L +    +S     K  K +  +Y+  F     P 
Sbjct: 28  NFNQFLKGFFYTLEMSVFALLLSLILGVIFGAMS-SSKTKLLKGIARVYVEIF--QNTPL 84

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV     Y                G+ +   F +  + +  Y  A+IAE++RSG+ AVPR
Sbjct: 85  LVQFVFVYYGLAIM--------TNGAVMISAFFTAVLCVGIYHGAYIAEVIRSGIEAVPR 136

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++ G T+++   L++LPQA+R+I+PP+T+Q +NL+KN+S    +  AD++    
Sbjct: 137 GQTEAALSQGFTYQETMSLIILPQAIRTILPPMTNQVVNLIKNTSTVAIISGADIMFTAK 196

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
               +T   I       F+Y  +   +A +  R  
Sbjct: 197 AWAYETTNYIPAFAGAAFLYFIMCFPLATWARRKE 231



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T  ++   ++ + I+G + GA   S  KL+  I RVYVE+F+N P LV   F+
Sbjct: 32  FLKGFFYTLEMSVFALLLSLILGVIFGAMSSSKTKLLKGIARVYVEIFQNTPLLVQFVFV 91

Query: 149 YKSV 152
           Y  +
Sbjct: 92  YYGL 95


>gi|119717235|ref|YP_924200.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardioides sp. JS614]
 gi|119537896|gb|ABL82513.1| amino acid ABC transporter membrane protein, PAAT family
           [Nocardioides sp. JS614]
          Length = 264

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 16/238 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
               G            +      K  V +F  GI L+L    L R    +  + L  +Y
Sbjct: 39  NFFDGDTWKGLWPDIILIGAKNTVKYTVIAFAGGIALALVL-ALMRLSPLRLYRWLATIY 97

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F   GLP LV+I     +    P+   +   GG+       +  +AL   + A++AE
Sbjct: 98  IEFF--RGLPALVVIIF---MALGVPLAFGWTPPGGTI-----GAGLMALIMVSGAYMAE 147

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+G+ AVP+GQ EAA +LG+        V+LPQA+R +IPPLT++++ L+K++SL   
Sbjct: 148 TLRAGIQAVPKGQREAAQSLGMGGFWTMVTVVLPQAVRIVIPPLTNEFILLVKDTSLLYV 207

Query: 344 VGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           VG      +L S G             +L    +YL +SI  +  +  L  +     +
Sbjct: 208 VGMQYDQVELTSFGQQ-GLINYSNASPLLAIALVYLVISIPASQLVAFLERRQQKASR 264



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 35/86 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   IL+G  NT             +  ++   RLS  +L  W+  +Y+E FR +P LVV
Sbjct: 50  WPDIILIGAKNTVKYTVIAFAGGIALALVLALMRLSPLRLYRWLATIYIEFFRGLPALVV 109

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMF 170
           I F+   V            +  G+ 
Sbjct: 110 IIFMALGVPLAFGWTPPGGTIGAGLM 135


>gi|320547898|ref|ZP_08042181.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320447438|gb|EFW88198.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 267

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 96/233 (41%), Gaps = 3/233 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLY 223
           +P G   + R +      +  +    +   + G V  L      +     +T    P+  
Sbjct: 20  IPEGQLFSWRAVFDAIPDLIEHLPTTLGLTIAGAVFGLLLALLFAIVKINRTKVLYPIQA 79

Query: 224 ISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +    + G P LV + L Y     F K +  ++ F       P  +    A +   AA+ 
Sbjct: 80  VFVSFLRGTPILVQLMLTYYGIPLFLKFLKLKYGFDWNINAIPASVFAVTAFAFNEAAYT 139

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA
Sbjct: 140 SETIRAAIQAVNVGEIEAAKSLGMTSFQVYRRVIIPNAAVIATPTLINSLIGLTKGTSLA 199

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              G  ++ +    +     +  E  +    +Y  +SI+I      +  K+++
Sbjct: 200 FNAGIVEMFAQAQILGGSDYRYFERYISVAIVYWVISILIEQIGRLIEKKMSI 252


>gi|257093094|ref|YP_003166735.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045618|gb|ACV34806.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 252

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 11/212 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + +  +G+V+ + A  L +       + L   Y+  +LI G P L+ I   +    
Sbjct: 52  VGLTLIAGSVGVVIGVLAG-LGKLSRFWPLRWLCDSYV--WLIRGTPLLLQILFVW---L 105

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L             +F    IALS    A+  E VR+G++AVP GQ+EAA ALGLT
Sbjct: 106 AFPLLM-----PEGVELSDFACAAIALSLNVGAYNTECVRAGILAVPHGQVEAARALGLT 160

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++LPQ+MR  +P L +   +L+K+SSLA A+   +L  VG  +  ++ Q I +
Sbjct: 161 PMQTFMDIVLPQSMRVALPALANNLASLVKDSSLAYAISVVELTMVGYRVQAESYQPIPV 220

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +    IYL L+         L +++ + +K+
Sbjct: 221 FITVAAIYLILTTAFTTLTAALESQLDVGQKR 252



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T  L         +IG L G G+LS    + W+C  YV + R  P L+ I F+
Sbjct: 44  FADGARITVGLTLIAGSVGVVIGVLAGLGKLSRFWPLRWLCDSYVWLIRGTPLLLQILFV 103

Query: 149 YKSVLSVLPIPDHSIVL 165
           + +   ++P        
Sbjct: 104 WLAFPLLMPEGVELSDF 120


>gi|213029271|ref|ZP_03343718.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 199

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 12/210 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I V     G+V+ L A   +R F       + L++I   +I G P +V +   Y  
Sbjct: 1   MTLWISVLGLAGGLVIGLAAG-FARTFGGWFANHIALVFIE--IIRGTPIVVQVMFIY-- 55

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P+               F +  + +   + A+IAEI R  ++++ +G  EA +ALG
Sbjct: 56  -FALPMAF------NDLRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALG 108

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+ R+  R V+LP A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+
Sbjct: 109 LSRRETIRHVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRAL 168

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           EI       YL ++++++  + RL  ++ +
Sbjct: 169 EIWSAVAVFYLIITLVLSFILRRLERRMKI 198



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T W++  G+    +IG   G  R         I  V++E+ R  P +V + F+Y ++   
Sbjct: 2   TLWISVLGLAGGLVIGLAAGFARTFGGWFANHIALVFIEIIRGTPIVVQVMFIYFALPMA 61

Query: 156 L 156
            
Sbjct: 62  F 62


>gi|33603522|ref|NP_891082.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33577646|emb|CAE34911.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 229

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 7/216 (3%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 M    K+   S  +G+ L      + R    +   A+   Y++     GL  L 
Sbjct: 15  YLFRDGMVFTLKLTFLSTAMGLALGTLL-AMCRLSGIRPLSAVAAAYVN-----GLRALP 68

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           LI + +  +F  P +G +    G  +    F S  I  + + AA+  EI+R+G+ ++PRG
Sbjct: 69  LILVIFWFYFLVPYIGGWLTGAGRPLQVGGFTSALITFTLFEAAYFCEIMRAGIQSIPRG 128

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA A+GL + +    V+LPQA+R++ P L +Q + L +++SL   +   D +  G  
Sbjct: 129 QTSAAYAIGLNYWQTMAYVVLPQALRNMAPVLLTQTIVLFQDTSLVYVLSLTDFLGAGIN 188

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  +  + +E+ L    +Y  +S   + F++ L  +
Sbjct: 189 VAQRDNRLVEMYLFVAAVYFVMSFAASRFVHYLQQR 224



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 31/67 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L F        +GTL+   RLS  + ++ +   YV   R +P ++VIF+ Y  
Sbjct: 20  GMVFTLKLTFLSTAMGLALGTLLAMCRLSGIRPLSAVAAAYVNGLRALPLILVIFWFYFL 79

Query: 152 VLSVLPI 158
           V  +   
Sbjct: 80  VPYIGGW 86


>gi|313902270|ref|ZP_07835675.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermaerobacter subterraneus DSM 13965]
 gi|313467421|gb|EFR62930.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermaerobacter subterraneus DSM 13965]
          Length = 375

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   SF LG++L+L      R       +AL + YI   L+ G P +V++      
Sbjct: 175 LAVAGITLSFPLGVLLAL-----GRVSSLPVVRALSIAYIE--LVRGTPLMVVLFF---- 223

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +     F+  S            L  +TAA++AE VR GL  VPRGQ+EAA ALG
Sbjct: 224 ----SMTALPLFLPPSVRPDLVTRAAAGLVLFTAAYVAEAVRGGLQGVPRGQVEAAQALG 279

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---G 361
           LT  +A  L++LPQA+R++IP L  Q+++L K++SL    G  + V V  ++++     G
Sbjct: 280 LTGTQAVLLIILPQALRAVIPALVGQFISLFKDTSLVAVWGLLEFVGVAQSVLSNPSYLG 339

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +E+      +Y      ++L   RL  ++ + E+
Sbjct: 340 RHVEMYAFVAAVYWVFCYGMSLASRRLERRLGVGER 375


>gi|209547516|ref|YP_002279434.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538760|gb|ACI58694.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 16/229 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT---RLSRHFHEKTGKALPLLYIS 225
           M  +   +     T+    KI + + +LG  +++ A     ++R                
Sbjct: 1   MEWDWDFVWQIMPTLLEGFKITILATILGAAVAMVAGLGLAIARRSSVAAISRTVGFVSE 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G P LV +   + +  D                    +  I +  + A + AE+ 
Sbjct: 61  F--IRGTPLLVQLYFIFYVLPDI-----------GIRLSPLTAGVIGMGIHYATYTAEVY 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  VPRGQ EAA A  LT R+A   V+LPQA+  +IP L + ++ + K + L  A+ 
Sbjct: 108 RAGIENVPRGQWEAAKATNLTTRQAWIHVVLPQAIPPMIPALANYFIAMFKETPLLSAIT 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +L++   +I N   + IE + +    +L +S++  + +  L  + A 
Sbjct: 168 VLELMNQAKSIANSNYRYIEPMTLVGVFFLVISLISVVGLRWLEERYAR 216



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         +L GF  T      G   A + G  +   R S+   ++       E  R
Sbjct: 4   DWDFVWQIMPTLLEGFKITILATILGAAVAMVAGLGLAIARRSSVAAISRTVGFVSEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P LV ++F++  +  +   
Sbjct: 64  GTPLLVQLYFIFYVLPDIGIR 84


>gi|227504862|ref|ZP_03934911.1| glutamate transporter permease protein GluD [Corynebacterium
           striatum ATCC 6940]
 gi|227198553|gb|EEI78601.1| glutamate transporter permease protein GluD [Corynebacterium
           striatum ATCC 6940]
          Length = 312

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/289 (20%), Positives = 119/289 (41%), Gaps = 15/289 (5%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +         +          +Y  +   +   V+ +   K        P+         
Sbjct: 1   MSVRATVLYDAPGPKGRRNNAIYTVITAIVATAVLAWVFMKLNERNQLSPELWTPFLNSQ 60

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L     T+ +     + + V G+V  L      R    +  + +  + +  F  
Sbjct: 61  TWTTYLLPGLKGTIFSAVASILLAIVFGVVFGL-----GRLSEHRPIRWVCGVVVEFF-- 113

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P L+L+   YQL     ++         +    F ++  AL+ Y  + +AEI+RSG+
Sbjct: 114 RAIPVLLLMIFAYQLFAVYDLVP--------SKHLAFGAVVFALTLYNGSVVAEILRSGI 165

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+GQ EAA ALGL+H++    VLLPQA+ +++P L SQ +  LK+S+L   +G+ ++
Sbjct: 166 RSLPKGQTEAAKALGLSHQQTMFKVLLPQAVAAMLPALISQMVIALKDSALGYQIGYVEV 225

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V  G    +     +  ++    I + ++  + +   R+  ++     +
Sbjct: 226 VRSGIQSASFNKNYLASLIAVAIIMILINWGLTVLAQRIERQLRAGRAR 274



 Score = 79.6 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R +N    +I A++ T +  W    +    E++ LS           
Sbjct: 4   RATVLYDAPGPKGRRNNAIYTVITAIVATAVLAWVFMKLN---ERNQLSP---------- 50

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
               +   P+ +  ++ T +L G   T + A + ++ A + G + G GRLS ++ + W+C
Sbjct: 51  ----ELWTPFLNSQTWTTYLLPGLKGTIFSAVASILLAIVFGVVFGLGRLSEHRPIRWVC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            V VE FR IP L+++ F Y+       +P   +     +F
Sbjct: 107 GVVVEFFRAIPVLLLMIFAYQLFAVYDLVPSKHLAFGAVVF 147


>gi|330836287|ref|YP_004410928.1| amino acid ABC transporter membrane protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329748190|gb|AEC01546.1| amino acid ABC transporter membrane protein, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 211

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 13/188 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R    K   A+   YI   ++ G P ++ I   Y   +                   
Sbjct: 34  AKGRMSRFKPLSAVVNAYIM--VMRGTPLILQILFVYFAPYYL----------FGASYDR 81

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++ IA +   AA+ AEI R G+ ++P+GQ EA   LG T  +    + +PQ ++ IIP
Sbjct: 82  FTAVIIAFTVNYAAYFAEIYRGGIQSIPKGQHEATHVLGFTPWQTFTRITMPQVVKRIIP 141

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + ++ + L+K+++LA  +G A+L  V      +    + I +     Y  ++++++   
Sbjct: 142 SMGNEVITLVKDTALAQTIGVAELFRVAQNASAREFSTMPIFM-AGVFYFIMNMVVSKAF 200

Query: 386 NRLNAKIA 393
           +    K++
Sbjct: 201 DAWERKLS 208


>gi|325924206|ref|ZP_08185766.1| amino acid ABC transporter membrane protein, PAAT family
           [Xanthomonas gardneri ATCC 19865]
 gi|325545337|gb|EGD16631.1| amino acid ABC transporter membrane protein, PAAT family
           [Xanthomonas gardneri ATCC 19865]
          Length = 583

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 11/260 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV I  +   + SVL  P     +    F     L+    T+   A   +F F LG VL+
Sbjct: 39  LVAILLILAVLQSVLGNPRWGWDVFAEWFFAEPVLAGLGRTLLLTALGTLFGFALGTVLA 98

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNF 256
           L     +R         +   Y+  F    L  L+L+          +  D P  G   F
Sbjct: 99  L-----ARVSGSPLLAGVSWGYVWLFRSIPLLVLLLLLNNLGYLYATISLDVPFTGITLF 153

Query: 257 IGGST-VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              +T +  +F +  + LS   AAF AEI+R G+++V +GQ EA+ ALGL   +  R ++
Sbjct: 154 SYPTTALISQFAAAVLGLSLNQAAFSAEIIRGGILSVDQGQFEASAALGLPRVRQIRRIV 213

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+I+P   +  +NL K +S+   +   +L      I  +    + ++++    YL
Sbjct: 214 LPQAMRTILPGAFNDVINLAKGTSVVYILALPELFYTIQVIYRRNLDVVPLLMVATVWYL 273

Query: 376 SLSIMIALFMNRLNAKIALK 395
            +  +++L   ++  + A  
Sbjct: 274 VILTLLSLLQAQVERRFARG 293



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           L G   T  L   G +    +GT++   R+S + L+A +   YV +FR+IP
Sbjct: 73  LAGLGRTLLLTALGTLFGFALGTVLALARVSGSPLLAGVSWGYVWLFRSIP 123


>gi|319761713|ref|YP_004125650.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317116274|gb|ADU98762.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 232

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 4/195 (2%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R  + K  +A+   Y+       +P LV I L Y       +L        +  
Sbjct: 42  VLIAVMRMSNSKACQAVAAAYVE--YHQNVPLLVHIFLWYFG--VAALLPAGVQQWINAH 97

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + EF+  +I +     A+++E +R G+ ++P  Q+EA+ ALGL++ +A RLV+LPQA+R 
Sbjct: 98  NSEFIFAFIGIGLCLGAYMSEDLRGGIRSIPTSQLEASRALGLSYLQAFRLVILPQAVRV 157

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L +  + L KN+SLA+ VG  +L  V   + +QT +  EI L    +YL LS+++ 
Sbjct: 158 SMPALINHTVLLFKNTSLAMTVGAVELTYVTKEVESQTFRTFEIYLASTVMYLGLSLLLM 217

Query: 383 LFMNRLNAKIALKEK 397
            F   +  +I ++ +
Sbjct: 218 WFGAVIENRIRIRNR 232



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 27/153 (17%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA      A  +  L+   R+S +K    +   YVE  +N+P LV IF  Y  
Sbjct: 22  GLLGTLELAALAFALAIAMAVLIAVMRMSNSKACQAVAAAYVEYHQNVPLLVHIFLWYFG 81

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-LGIVLSLFA------ 204
           V ++LP      +                   + +   F+F+F+ +G+ L  +       
Sbjct: 82  VAALLPAGVQQWI-------------------NAHNSEFIFAFIGIGLCLGAYMSEDLRG 122

Query: 205 -TRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
             R       +  +AL L Y+  F +  LP  V
Sbjct: 123 GIRSIPTSQLEASRALGLSYLQAFRLVILPQAV 155


>gi|303253452|ref|ZP_07339594.1| ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|302647696|gb|EFL77910.1| ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
          Length = 153

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 65/127 (51%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  S    A+ +E VR+ + +VP+GQ EA   +G+T+ +  R ++ PQA+R  +PPL
Sbjct: 23  AAIIGFSLNIGAYGSETVRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAIRVAVPPL 82

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ ++ L K++SLA  V   ++  V   + N +   + + +    IY      + L   +
Sbjct: 83  SNTFIGLFKDTSLASVVTVTEMFRVAQQMANMSYDFLPVYIEAGLIYWCFCWGLFLIQAK 142

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 143 LERRFNR 149


>gi|53728961|ref|ZP_00348281.1| COG4215: ABC-type arginine transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 209

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 7/213 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S ++G++LS+    L         K      +   L+ GLP ++++ L +  
Sbjct: 1   MTLGLALTSLIVGLLLSMLFVVLETSKQPCISKPTS---VFLALLRGLPEILVVLLIFFG 57

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             +        ++  S     F    +ALS   +A+ ++ +R  + AVP GQ E+  ALG
Sbjct: 58  STELVEKITSEYVEFS----AFSCGVLALSLIFSAYASQSLRGAIQAVPNGQWESGAALG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I     Q  
Sbjct: 114 LSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQTDLINTNEHQPF 173

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               +   IYL+++++  + +  L  +    E+
Sbjct: 174 TWYGLAALIYLAITLISQVIIAGLEKRFTRFER 206


>gi|218682497|ref|ZP_03530098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 226

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G+VL L  T ++R F      A+   Y+  ++I G P LV + 
Sbjct: 17  WAGLIFTIPLTLLSFAFGLVLGLI-TAIARLFGPAPVAAIARFYV--WVIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  VIFY-----------GLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    +YL LS +++    RL  + A  
Sbjct: 183 TYEPLILYIEAALLYLVLSSVLSQLQVRLERRFARY 218



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L         ++G +    RL     VA I R YV V R  P LV +F +
Sbjct: 16  LWAGLIFTIPLTLLSFAFGLVLGLITAIARLFGPAPVAAIARFYVWVIRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 76  FYGLPSIGILLDAFPAALIGFTLN 99


>gi|190150673|ref|YP_001969198.1| arginine transporter permease ArtQ [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264021|ref|ZP_07545621.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915804|gb|ACE62056.1| arginine transport system permease protein ArtQ [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306870632|gb|EFN02376.1| Arginine ABC transporter permease protein artQ [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 223

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L         K      +   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETSKQPCISKPTS---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEK----ITGEYVEFSAFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E++ ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESSAALGLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEKRFTRFER 220


>gi|218532219|ref|YP_002423035.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium chloromethanicum CM4]
 gi|218524522|gb|ACK85107.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium chloromethanicum CM4]
          Length = 230

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 10/230 (4%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS---------TF 227
            F    +   A    + F  G+V +L  T L+       G  L LL +S           
Sbjct: 1   MFGHFDLSVVAHSLPYLFGEGMVFTLTLTALAASGGIVLGTGLALLRLSGVPGLTHAAKI 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVR 286
            +  + +L L+ + +  +F  P LG +     + +    F S  +  + + AA+ +EIVR
Sbjct: 61  YVELMRSLPLVLVIFWFYFLVPYLGAWAIGADTPIQVGAFASALVTFTLFEAAYFSEIVR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++P+GQ  AA ALG+++ +  RLV+LPQA R+++P L +Q + L +++SL   +  
Sbjct: 121 AGIQSIPKGQSAAARALGMSYAQVMRLVVLPQAFRNMVPLLLTQTIVLFQDTSLVYVLSL 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D +     +  + G+ +E+ L    +Y ++    +L + RL A+ A+  
Sbjct: 181 TDFLGAASKVAQRDGRLVEMYLFAALVYFAVCFAASLLVRRLQARTAIAR 230



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G V T  L         ++GT +   RLS    +    ++YVE+ R++P ++VIF+ 
Sbjct: 18  FGEGMVFTLTLTALAASGGIVLGTGLALLRLSGVPGLTHAAKIYVELMRSLPLVLVIFWF 77

Query: 149 YKSVLSVLPIP 159
           Y  V  +    
Sbjct: 78  YFLVPYLGAWA 88


>gi|116670891|ref|YP_831824.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116611000|gb|ABK03724.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 221

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 105/234 (44%), Gaps = 16/234 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             +    ++ +   +    +T      +  F   L + L +   RLSR+       A   
Sbjct: 1   MNINWDLVWNSLGPILIGAITGTIPLALASFGLGLLLALLVALMRLSRN---PVLSAAAR 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YIS  +I G P LV + + +                       + S  IA S     + 
Sbjct: 58  MYIS--VIRGTPLLVQLFVIFY-----------GLPSVGVTISPWPSAIIAFSLNVGGYA 104

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++R+ +++VP+GQ EA   +G++ R++   ++LPQA R  +PPL++ +++L+K++SLA
Sbjct: 105 AEVIRAAILSVPKGQWEAGHTIGMSRRQSLVRIILPQAARVSVPPLSNTFISLVKDTSLA 164

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   +L      +   + + + + L    IY  + +++A   + L  ++   
Sbjct: 165 SLILVTELFRQAQQVAAFSQEFMLLYLEAAVIYWIICLVLAGGQSVLEKRLDRY 218


>gi|298290886|ref|YP_003692825.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927397|gb|ADH88206.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 240

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + +  +GI + L    L++       +    LY + F       L L  + Y  
Sbjct: 25  LTIELALATLPVGIAIGLMI-ALAKDSSSAILRGFGNLYTTIFRGL-PELLTLFIVYYGG 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +  +   G +    +F++  +AL     AF +E++ + + AVP+GQ EAA ALG
Sbjct: 83  QMLLTRIAGYLVDGANIEVNQFVAGVVALGLVLGAFSSEVLLAAIRAVPKGQKEAAAALG 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  RLV  PQ  R  +P L++ ++ LLK++SL   +  +DL+      +  T Q  
Sbjct: 143 LSGWRTFRLVTFPQLWRVALPGLSNNWMVLLKDTSLVSVIAISDLMRQTAIAVGVTKQPF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   IYL  S   ++   +L  + A   K+
Sbjct: 203 FFYLVACLIYLVFSGASSVVFGKLEDRAARGFKR 236



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 14/159 (8%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G + T  LA + +     IG ++   + S++ ++     +Y  +FR +P L+ 
Sbjct: 15  WGDEIAQGALLTIELALATLPVGIAIGLMIALAKDSSSAILRGFGNLYTTIFRGLPELLT 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--- 201
           +F +Y               +                     A +     VLG   S   
Sbjct: 75  LFIVYYGG-----------QMLLTRIAGYLVDGANIEVNQFVAGVVALGLVLGAFSSEVL 123

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L A R      ++   AL L    TF +   P L  +AL
Sbjct: 124 LAAIRAVPKGQKEAAAALGLSGWRTFRLVTFPQLWRVAL 162


>gi|325688759|gb|EGD30768.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 286

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 110/268 (41%), Gaps = 16/268 (5%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           EV   +   ++    Y+  L  +P       L          L    +T+   A   VF 
Sbjct: 15  EVIMVVTTYLLTTGWYEEFLKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFG 73

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-- 251
            +L +V ++      +  +       P+       + G P LV + L Y   F  P+L  
Sbjct: 74  ILLAMVFAIVKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLK 123

Query: 252 ---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               ++         P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T++
Sbjct: 124 AINQKYGTSFNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDSGEIEAARSLGMTNK 183

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++P A     P L +  + L K +SLA + G  ++ +    I     +  E  +
Sbjct: 184 QVYMRVIIPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFI 243

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               IY +++I+I      +   + +K+
Sbjct: 244 SVSLIYWAVNILIEQLGRWIEKMMDIKQ 271


>gi|300693655|ref|YP_003749628.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
 gi|299075692|emb|CBJ34989.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
          Length = 247

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 16/214 (7%)

Query: 187 AKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               +   VLGIVL+     A  L+R    +  +A     + T L++ +  + L+ L   
Sbjct: 27  IACTLILSVLGIVLAFPLSVALALARLSPWRALRA-----VVTALVYAVRGVPLLMLILW 81

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F  P+L   N  G       F ++   L+ Y   ++ E+VR+G+ A+P+GQMEAA AL
Sbjct: 82  VYFLVPLLIGHNVSG-------FTTMLCTLAIYEGVYLCEVVRAGIEALPKGQMEAARAL 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQ 362
           G ++  A RLV+LPQA+ +++P + +Q+++ +K ++L   +   +L      I N    +
Sbjct: 135 GHSYLGAMRLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSK 194

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +I  +   IY  +   +      L  +IA K 
Sbjct: 195 PFQIFFLLAVIYFVVCWSLTRAARALERRIAAKR 228



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+  G++ A  +   +   RLS  + +  +    V   R +P L++I ++Y
Sbjct: 24  LGGIACTLILSVLGIVLAFPLSVALALARLSPWRALRAVVTALVYAVRGVPLLMLILWVY 83

Query: 150 KSVLSVLPI 158
             V  ++  
Sbjct: 84  FLVPLLIGH 92


>gi|254454756|ref|ZP_05068193.1| ABC transporter permease protein [Octadecabacter antarcticus 238]
 gi|198269162|gb|EDY93432.1| ABC transporter permease protein [Octadecabacter antarcticus 238]
          Length = 225

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 15/234 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   + N  L +  L           +F L + L L  +RLS            L
Sbjct: 1   MYEWDFTSVIENSDLLWQGLLGTLAITGTALAFGLPLGLILALSRLSPRRW--------L 52

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            + + F+I    T   +   +   F  P+L              +++  I  S  ++AF 
Sbjct: 53  AWPAGFVIEFFRTTPPLVQLFWFFFALPILM-------DIQMTPYLAAAITFSIQSSAFF 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+G++++ +GQ EAA A+G+   +A R ++LPQA++ +IP  T + + L+K ++L 
Sbjct: 106 AEVFRAGIVSIEKGQWEAARAIGMQRPQAMRRIILPQAVKRMIPAFTERAIELMKTTTLV 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             V +ADL+     +  +T + IE+  +   IY  +   ++L +  +  ++A+ 
Sbjct: 166 ATVSYADLLYQANELAQKTFRPIEVFTVTALIYFFVIFGLSLCVQAVERRLAVS 219



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 38/79 (48%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +TS    +  +  G + T  +  + +     +G ++   RLS  + +AW     +E FR
Sbjct: 5   DFTSVIENSDLLWQGLLGTLAITGTALAFGLPLGLILALSRLSPRRWLAWPAGFVIEFFR 64

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             PPLV +F+ + ++  ++
Sbjct: 65  TTPPLVQLFWFFFALPILM 83


>gi|168485721|ref|ZP_02710229.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|183571097|gb|EDT91625.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
          Length = 225

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILAHIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL+ LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  +  ++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|94500102|ref|ZP_01306636.1| ABC-type arginine/histidine transport system, permease component
           [Oceanobacter sp. RED65]
 gi|94427675|gb|EAT12651.1| ABC-type arginine/histidine transport system, permease component
           [Oceanobacter sp. RED65]
          Length = 237

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 5/223 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             N   L           ++   S ++G+++S+    + R            +++ T++ 
Sbjct: 13  IFNLTTLEHYWDGFVMTTQLVFLSLIIGLLVSVPL-AIMRTSKNPLINYP--VWVFTYVF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y        +    F         +    IA +  TAA+  EI R  +
Sbjct: 70  RGTPLLIQLYLIYYGVTLIEGIQDSVF--WVIFERAYYPCLIAFALNTAAYTTEIFRGAI 127

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
               +G++EAA A G++  K  + ++LP A R  IP  T++ + +L  S++A  V   DL
Sbjct: 128 ETTSKGEIEAARAYGMSWSKCMKRIVLPSAFRRAIPAYTNEVIFMLHASAIASTVTIIDL 187

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 I  +     E  L    IYL L+  I +   +L  ++
Sbjct: 188 TGAARDIYARFYAPFEAFLFVAAIYLCLTFSIIMLFKQLEKRL 230



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 42/102 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GFV T  L F  +I   ++   +   R S N L+ +   V+  VFR  P L+ ++ +
Sbjct: 22  YWDGFVMTTQLVFLSLIIGLLVSVPLAIMRTSKNPLINYPVWVFTYVFRGTPLLIQLYLI 81

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  V  +  I D    + F        ++F   T     +IF
Sbjct: 82  YYGVTLIEGIQDSVFWVIFERAYYPCLIAFALNTAAYTTEIF 123


>gi|326423793|ref|NP_759985.2| putative amino acid ABC transporter permease [Vibrio vulnificus
           CMCP6]
 gi|319999159|gb|AAO09512.2| Putative amino acid ABC transporter, permease protein [Vibrio
           vulnificus CMCP6]
          Length = 246

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 29/259 (11%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+++  L                   G+      ++    T+  +    +F+  LG++++
Sbjct: 8   LMMLLPLTGCSDYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAMTLGLMVA 67

Query: 202 LFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L A    +        + +  +A+P+L +  ++ +GLPTL+ ++L               
Sbjct: 68  LPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWVYYGLPTLLDVSL--------------- 112

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                     + +  IAL+   +AF+AE+ R G+ ++ RGQ EAA +LGL + +  RLV+
Sbjct: 113 --------DHYWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSLGLNYWQKMRLVI 164

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA R ++P L +Q++ +LK SSL   +G +DL      ++      +EI    +  YL
Sbjct: 165 LPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYL 224

Query: 376 SLSIMIALFMNRLNAKIAL 394
            L +M++  +  L  + A+
Sbjct: 225 LLILMVSQAVRWLEKRSAI 243



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    ++ GF +T  ++   M+ A  +G +V    LS  K +  + R+YVEV R IP LV
Sbjct: 36  TNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLV 95

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 96  LLLWVYYGLP 105


>gi|299821270|ref|ZP_07053158.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299816935|gb|EFI84171.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 240

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 7/237 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            +   F + +    +      +     I + S + G +L L    L+R +       L  
Sbjct: 2   QMDKGFSIKMIGDFIPTLLGYLPITLYILIVSLIFGFILGLLL-ALTRIYRVPVLSQLGK 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYIS F   G P +V + + +   +  P +     I  S + P   +     +  +AA I
Sbjct: 61  LYISFF--RGTPIMVQLFIVF---YGIPAITALVGIDTSKMDP-LYAAIATYALSSAAGI 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR+G+ +V +GQ EAA ++GLT R+    ++LPQA+   +P   +  +  LK++SLA
Sbjct: 115 AEIVRAGVNSVEKGQEEAAYSIGLTGRQTFLRIVLPQALLQAMPNFGNMIIGFLKDTSLA 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++G  D+   G T+I+ +  ++E+ +    IY   +I++      +   +   + +
Sbjct: 175 FSIGVMDMSGRGQTLISSSNHSLEVYIALAVIYYLTAIVLEQGFKWVERFMKRDDTR 231



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 35/75 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G L+   R+    +++ + ++Y+  FR  P +V +F ++  + ++
Sbjct: 26  TLYILIVSLIFGFILGLLLALTRIYRVPVLSQLGKLYISFFRGTPIMVQLFIVFYGIPAI 85

Query: 156 LPIPDHSIVLPFGMF 170
             +          ++
Sbjct: 86  TALVGIDTSKMDPLY 100


>gi|307710648|ref|ZP_07647081.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
 gi|307618591|gb|EFN97734.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
          Length = 233

 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y SL   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKMEQ 217



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|148983988|ref|ZP_01817307.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148998281|ref|ZP_01825750.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149005717|ref|ZP_01829456.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|168576493|ref|ZP_02722367.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|169833891|ref|YP_001694087.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|225856307|ref|YP_002737818.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|303260100|ref|ZP_07346073.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP-BS293]
 gi|303261284|ref|ZP_07347232.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP14-BS292]
 gi|303263949|ref|ZP_07349870.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS397]
 gi|303265940|ref|ZP_07351836.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS457]
 gi|303268322|ref|ZP_07354119.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS458]
 gi|307067224|ref|YP_003876190.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|307126807|ref|YP_003878838.1| glutamine ABC transporter membrane-spanning permease [Streptococcus
           pneumoniae 670-6B]
 gi|147755924|gb|EDK62968.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147762657|gb|EDK69617.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147924135|gb|EDK75247.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|168996393|gb|ACA37005.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|183577716|gb|EDT98244.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|225724546|gb|ACO20398.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|301799654|emb|CBW32214.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae OXC141]
 gi|302637418|gb|EFL67905.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP14-BS292]
 gi|302638795|gb|EFL69257.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP-BS293]
 gi|302642160|gb|EFL72510.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS458]
 gi|302644524|gb|EFL74775.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS457]
 gi|302646354|gb|EFL76580.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae BS397]
 gi|306408761|gb|ADM84188.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|306483869|gb|ADM90738.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 670-6B]
 gi|332077038|gb|EGI87500.1| putative ABC-type amino-acid transporter permease protein
           [Streptococcus pneumoniae GA17545]
          Length = 225

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|126665670|ref|ZP_01736651.1| ABC-type arginine/histidine transport system, permease component
           [Marinobacter sp. ELB17]
 gi|126629604|gb|EBA00221.1| ABC-type arginine/histidine transport system, permease component
           [Marinobacter sp. ELB17]
          Length = 240

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 98/228 (42%), Gaps = 5/228 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L      + T  ++   S ++G+V++L    L    +      +   ++ T+L 
Sbjct: 14  IFTVMTLLEYWNGLVTTVQLVFLSLLIGLVIALPLAILRTVRNPFVSGPI---WVYTYLF 70

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + Y      P + +  +   +     F    +A +  TAA+  EI+R  +
Sbjct: 71  RGTPLLIQLYIIYYGIAQIPGIQETFW--WNIFREPFYPALLAFTLNTAAYTTEIIRGAI 128

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           IA P G++EAA A G++     R ++LP A R  +   +++ + +L  S++A  V   DL
Sbjct: 129 IATPMGEIEAAKAYGMSWMLRMRRIILPNAARRAVQAYSNEVIFMLHASAIASVVTMVDL 188

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I  +T    +  +    IYL L+ ++     +L   +   ++
Sbjct: 189 TGAARNIYARTYAPFDAFIFVALIYLMLTFILVFVFRKLENHLLRHQR 236



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G V T  L F  ++   +I   +   R   N  V+    VY  +FR  P L+ ++ +
Sbjct: 23  YWNGLVTTVQLVFLSLLIGLVIALPLAILRTVRNPFVSGPIWVYTYLFRGTPLLIQLYII 82

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           Y  +  +  I +      F        L+F   T     +I   + +
Sbjct: 83  YYGIAQIPGIQETFWWNIFREPFYPALLAFTLNTAAYTTEIIRGAII 129


>gi|315655010|ref|ZP_07907914.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
 gi|315490666|gb|EFU80287.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
          Length = 303

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 22/218 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKT-----------GKALPLLYISTFLIFGLPTL 235
             + + + +LG V+      L+   H  T            + +  +Y+  F   G P +
Sbjct: 28  VLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLAIIRGIIRVYVEVF--RGTPMI 85

Query: 236 VL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +  + + Y L +      QF  + G ++          +S  T A+IAE VR G+I+V  
Sbjct: 86  LQAVFIYYGLPYFTNNALQFQSMWGVSIF--------VVSINTGAYIAESVRGGIISVDP 137

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E A A+G+TH +    V+LPQA+R+++P + + ++  +K++S+   +GF++  SV  
Sbjct: 138 GQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIKDTSVMFIIGFSEFFSVHK 197

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +     +      I M  YL+L+++ +  + +L  KI
Sbjct: 198 MVSGAVFKYFPSATIEMVGYLTLTLLSSFLLRKLEKKI 235



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 33/99 (33%), Gaps = 12/99 (12%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK------------LVAWICRVY 132
           Y    L G VNT  LA    +   +IG   G      +             ++  I RVY
Sbjct: 16  YGGVYLTGIVNTVLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLAIIRGIIRVY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           VEVFR  P ++   F+Y  +            +      
Sbjct: 76  VEVFRGTPMILQAVFIYYGLPYFTNNALQFQSMWGVSIF 114


>gi|300916767|ref|ZP_07133477.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300415953|gb|EFJ99263.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
          Length = 347

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ +R G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHKRFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 105 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGR 344


>gi|188533380|ref|YP_001907177.1| Putative ABC transporter, permease [Erwinia tasmaniensis Et1/99]
 gi|188028422|emb|CAO96283.1| Putative ABC transporter, permease [Erwinia tasmaniensis Et1/99]
          Length = 299

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 11/262 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +F L   V SV   P     +    F     LS    T+       V S  LG++L+L
Sbjct: 23  IALFILAIVVQSVAFNPRWEWSVFAHWFFAPAILSGLGQTLLLTLTASVLSIFLGVLLAL 82

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ------FNF 256
                +R         L   YI  F    L  +++I   +   +D+  LG          
Sbjct: 83  -----ARLSPSWLLSGLAFSYIWLFRSLPLIVVLIILYNFSYLYDRLSLGIPFTPLTLAS 137

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                V  +F +    L+   AA+ AEIVR G+  V  GQ EAA ALGL   + T  ++L
Sbjct: 138 FKTIDVLGQFSTAVTGLTLVQAAYTAEIVRGGITGVDHGQFEAAAALGLPSSRRTLRIIL 197

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+IIP   ++ ++L K +++   +   +L      + N+T Q I ++++    YL 
Sbjct: 198 PQALRAIIPSGFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLL 257

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           ++ ++++  + +  ++A    +
Sbjct: 258 ITTLLSVVQHYVERRLARSSAR 279



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A AIL G   T  L  +  + +  +G L+   RLS + L++ +   Y+ +FR++P +VV
Sbjct: 51  FAPAILSGLGQTLLLTLTASVLSIFLGVLLALARLSPSWLLSGLAFSYIWLFRSLPLIVV 110

Query: 145 IFFLYK 150
           +  LY 
Sbjct: 111 LIILYN 116


>gi|22126708|ref|NP_670131.1| arginine transporter permease subunit ArtQ [Yersinia pestis KIM 10]
 gi|45441073|ref|NP_992612.1| arginine transporter permease subunit ArtQ [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595716|ref|YP_069907.1| arginine transporter permease subunit ArtQ [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806634|ref|YP_650550.1| arginine transporter permease subunit ArtQ [Yersinia pestis
           Antiqua]
 gi|149366607|ref|ZP_01888641.1| arginine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|153950650|ref|YP_001401592.1| arginine ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162420520|ref|YP_001606087.1| arginine transporter permease ArtQ [Yersinia pestis Angola]
 gi|165924421|ref|ZP_02220253.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938991|ref|ZP_02227544.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009770|ref|ZP_02230668.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211449|ref|ZP_02237484.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399948|ref|ZP_02305466.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419783|ref|ZP_02311536.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424066|ref|ZP_02315819.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|170024937|ref|YP_001721442.1| arginine transporter permease subunit ArtQ [Yersinia
           pseudotuberculosis YPIII]
 gi|186894792|ref|YP_001871904.1| arginine transporter permease subunit ArtQ [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928498|ref|YP_002346373.1| arginine transporter permease subunit ArtQ [Yersinia pestis CO92]
 gi|229841312|ref|ZP_04461471.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843415|ref|ZP_04463561.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229895788|ref|ZP_04510958.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Pestoides A]
 gi|270487001|ref|ZP_06204075.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294503342|ref|YP_003567404.1| arginine transport system permease protein [Yersinia pestis
           Z176003]
 gi|21959727|gb|AAM86382.1|AE013886_7 arginine 3rd transport system permease protein [Yersinia pestis KIM
           10]
 gi|45435932|gb|AAS61489.1| arginine transport system permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588998|emb|CAH20616.1| ABC arginine transporter, permease subunit artQ [Yersinia
           pseudotuberculosis IP 32953]
 gi|108778547|gb|ABG12605.1| arginine transport system permease protein [Yersinia pestis
           Antiqua]
 gi|115347109|emb|CAL20002.1| arginine transport system permease protein [Yersinia pestis CO92]
 gi|149290981|gb|EDM41056.1| arginine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|152962145|gb|ABS49606.1| arginine ABC transporter, permease protein ArtQ [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353335|gb|ABX87283.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           Angola]
 gi|165913138|gb|EDR31762.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923481|gb|EDR40613.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991166|gb|EDR43467.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207220|gb|EDR51700.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962524|gb|EDR58545.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050656|gb|EDR62064.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056915|gb|EDR66678.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751471|gb|ACA68989.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697818|gb|ACC88447.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229689762|gb|EEO81823.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229697678|gb|EEO87725.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700711|gb|EEO88740.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Pestoides A]
 gi|262361382|gb|ACY58103.1| arginine transport system permease protein [Yersinia pestis
           D106004]
 gi|262365081|gb|ACY61638.1| arginine transport system permease protein [Yersinia pestis
           D182038]
 gi|270335505|gb|EFA46282.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294353801|gb|ADE64142.1| arginine transport system permease protein [Yersinia pestis
           Z176003]
 gi|320015799|gb|ADV99370.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 238

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++       +RL    +   G     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLVLAMLFAVGESSRLKVVSYLTIGWVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     +    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNLDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 IGQWESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|167585065|ref|ZP_02377453.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 226

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 97/234 (41%), Gaps = 14/234 (5%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   +           +     + + SF +G++L+  A      F  +  +A    Y
Sbjct: 1   MPAWLHLMAQSLWPLLYAGLVFTVPLTLASFAIGLLLAFAAALAR-LFGPRWARAAVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F   G P LV + + +                   V     +  I  S    A+ AE
Sbjct: 60  IWLF--RGSPLLVQLFVIFY-----------GLPNVGIVLDPLTAAVIGFSLNVGAYNAE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P+GQ EAA ++ +T  +A R  +LPQA R  +P L++ +++L+K++SLA  
Sbjct: 107 VIRGVIESIPKGQWEAAYSMAMTRAQALRRAILPQAARVALPALSNSFISLVKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   ++      I   T + + +      IYL  S +++    RL        +
Sbjct: 167 LTVPEVFQAAQRIAAVTYEPLILYTEAALIYLLFSSVLSTLQQRLETHFGRHAR 220


>gi|330005623|ref|ZP_08305301.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|328536189|gb|EGF62570.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 253

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 18/215 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +    +F+F +G++L L           +      L +  T  I+ L  + L+ + +  
Sbjct: 34  VSLLAVLFAFPVGVLLCLA----------RLSPWRWLSWPVTCWIYLLRGIPLMMVVFWT 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+L   N  G       F ++   L  Y + +IAEIVR G+ A+P GQ EA+ ALG
Sbjct: 84  YFCVPLLIGHNISG-------FSTMLCTLVIYESTYIAEIVRGGIQALPSGQYEASRALG 136

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QA 363
           + H +A RLV+LPQA+ + +P L SQ ++++K+S+L   +   +L      + NQ   + 
Sbjct: 137 MGHVRALRLVILPQALYNALPSLVSQLVSIIKDSTLGYVINVPELTYAANQVSNQLLTKP 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++  I    Y  ++  +    NRL  +IA + ++
Sbjct: 197 FQVFAIVALSYYIINFSLTWLANRLELRIASRRQR 231



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 11/147 (7%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  ++   ++ A  +G L+   RLS  + ++W    ++ + R IP ++V+F+ Y
Sbjct: 25  LGGVLCTLLVSLLAVLFAFPVGVLLCLARLSPWRWLSWPVTCWIYLLRGIPLMMVVFWTY 84

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             V  ++                   L    +   T     V   +  +         SR
Sbjct: 85  FCVPLLIGHNISGFS---------TMLCTLVIYESTYIAEIVRGGIQALPSG--QYEASR 133

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLV 236
                  +AL L+ +   L   LP+LV
Sbjct: 134 ALGMGHVRALRLVILPQALYNALPSLV 160


>gi|269104575|ref|ZP_06157271.1| putative amino acid ABC transporter permease protein
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268161215|gb|EEZ39712.1| putative amino acid ABC transporter permease protein
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 319

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 10/230 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALP-LLYIS 225
                    T+  +    +F+ VLG++  L         R+    + +  + +P L+++ 
Sbjct: 82  PYFFQGVATTIRISLWGMLFAGVLGLLFGLARRSSLAFIRMPAQAYIQLIRNIPPLVFVF 141

Query: 226 TFLIFGLPTLVLIA---LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    LV +      ++ +   P   Q    G   +     S  I +    +A+IA
Sbjct: 142 IFYFFISSQLVPLLGLETLFRYYNGTPNGLQTFLFGTPNLWENLFSGVICIGLLASAYIA 201

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+RSG+ ++ +GQ EAA +LGLT  +  R V+ PQA  S+IPPL  Q+++++K+SS+  
Sbjct: 202 EIIRSGIDSIEKGQWEAADSLGLTPLQRFRYVIFPQAFASVIPPLAGQFISIVKDSSIIS 261

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   +L  VG  I N +G   EI ++    YL L + +++  + L  + 
Sbjct: 262 LISIQELTFVGSEIANSSGYIFEIWILVGLAYLVLCLSLSILFSYLEKRY 311



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 1/123 (0%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL-VVIF 146
               G   T  ++  GM+ A ++G L G  R S+   +    + Y+++ RNIPPL  V  
Sbjct: 83  YFFQGVATTIRISLWGMLFAGVLGLLFGLARRSSLAFIRMPAQAYIQLIRNIPPLVFVFI 142

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F +     ++P+     +  +     N   +F   T +    +F     +G++ S +   
Sbjct: 143 FYFFISSQLVPLLGLETLFRYYNGTPNGLQTFLFGTPNLWENLFSGVICIGLLASAYIAE 202

Query: 207 LSR 209
           + R
Sbjct: 203 IIR 205


>gi|218705837|ref|YP_002413356.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli UMN026]
 gi|293405773|ref|ZP_06649765.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|298381456|ref|ZP_06991055.1| histidine transport system permease hisM [Escherichia coli
           FVEC1302]
 gi|300896989|ref|ZP_07115468.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|331663823|ref|ZP_08364733.1| histidine transport system permease protein HisM [Escherichia coli
           TA143]
 gi|331673810|ref|ZP_08374573.1| histidine transport system permease protein HisM [Escherichia coli
           TA280]
 gi|218432934|emb|CAR13828.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli UMN026]
 gi|284922295|emb|CBG35380.1| histidine ABC transporter, permease protein [Escherichia coli 042]
 gi|291427981|gb|EFF01008.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|298278898|gb|EFI20412.1| histidine transport system permease hisM [Escherichia coli
           FVEC1302]
 gi|300359170|gb|EFJ75040.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|331059622|gb|EGI31599.1| histidine transport system permease protein HisM [Escherichia coli
           TA143]
 gi|331069083|gb|EGI40475.1| histidine transport system permease protein HisM [Escherichia coli
           TA280]
          Length = 238

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G V++LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVMALFL-AIGRVSSNKYIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL    ++   ++   +  GR+S+NK + +   ++  +FR  P  V +   Y
Sbjct: 20  FTGVAITLWLLILSVVIGGVMALFLAIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + ++  +     +  F 
Sbjct: 80  SGMYTLEIVKGTEFLNAFF 98


>gi|239815857|ref|YP_002944767.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802434|gb|ACS19501.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 219

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 106/232 (45%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +                 + V + +L +   +    L R    K  ++  L ++
Sbjct: 1   MTFDWSVIWTHRQALLEGAALTVGLTVLTMLLAVPGGIVL-ALMRLSSNKLLQSASLGFV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       L LI + Y + +  P+   F            ++  +AL    +A+ AE 
Sbjct: 60  EFFRN-----LPLILVIYWVFYVMPMAVDFQL-------SPLVTALVALVLNISAYNAET 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQ+EAA+A+G++ R+A   V++PQA R I+P + S +++L K++SL   +
Sbjct: 108 FRAGINSIRKGQLEAALAMGMSRRQAMFKVVIPQAGRRILPVIASTWVSLFKDTSLVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++L      I  QT + +E++     +Y  +    A  ++ ++ K  +KE
Sbjct: 168 AVSELAYTAMQIRAQTFRVLEMLTAMAVLYWLMGYPQAKLVDWIHRKYGVKE 219



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 41/78 (52%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++   ++  A+L G   T  L    M+ A   G ++   RLS+NKL+      +VE FR
Sbjct: 4   DWSVIWTHRQALLEGAALTVGLTVLTMLLAVPGGIVLALMRLSSNKLLQSASLGFVEFFR 63

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N+P ++VI++++  +   
Sbjct: 64  NLPLILVIYWVFYVMPMA 81


>gi|210623571|ref|ZP_03293897.1| hypothetical protein CLOHIR_01847 [Clostridium hiranonis DSM 13275]
 gi|210153441|gb|EEA84447.1| hypothetical protein CLOHIR_01847 [Clostridium hiranonis DSM 13275]
          Length = 219

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 106/221 (47%), Gaps = 13/221 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L +  +T+  +    +F  +L  ++++                +  +YIS F   G 
Sbjct: 6   PTMLKYGGVTLKLSVLAIIFGLILAFIIAIVIDA-----KVPILNKVFKVYISFF--RGT 58

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  +   Y              I        F +  I LS  ++A++AE +R+ + ++
Sbjct: 59  PLMSQLFCFYFGVLPLLNHDTMLRI------SSFYAALIILSLASSAYMAESLRAAITSI 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQMEA+ ++G+T+ ++   ++LPQA+R  IP L S ++N++K++SL  A+G  ++++ 
Sbjct: 113 HKGQMEASQSIGMTYMQSMYHIILPQAIRVAIPTLFSSFINIVKDTSLVFAIGVKEMMAQ 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                + + + +E  +  + IY  ++ ++    +RL  K+ 
Sbjct: 173 AQLEGSSSYKYLEAFVCVLLIYWMITSIMTFVQSRLEKKMG 213



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           T  L+   +I   I+  ++     +   ++  + +VY+  FR  P +  +F  Y  VL
Sbjct: 15  TLKLSVLAIIFGLILAFIIAIVIDAKVPILNKVFKVYISFFRGTPLMSQLFCFYFGVL 72


>gi|86138395|ref|ZP_01056969.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           MED193]
 gi|85824920|gb|EAQ45121.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           MED193]
          Length = 215

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 14/223 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             R   F          + V + +LG++ ++  T  +R    +  + L   Y+S F   G
Sbjct: 6   MQRVFPFFLEAAWITILLSVLTAILGLICAMLGTA-ARLSRFRVLRFLGAAYVSVF--RG 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L+ + + Y           F           F +  I L     A++ E +R  +I+
Sbjct: 63  TPALIQLFILY-----------FGGPQIGIQLDAFEAGVIGLGVNVGAYMTETMRGAIIS 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ EAA  LG++  +A R V+LPQAMR +I PL      L+K+++L  A+   +L  
Sbjct: 112 VDKGQGEAARTLGMSKWQAMRNVILPQAMRLMIRPLGVNLNTLIKSTALVAAISVVELTY 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                I  T +  E+ LI   +Y+ +  ++ L +   + K  L
Sbjct: 172 TAQRYIGSTYKPFEMFLIAGLLYMIIIYVVGLAVTWADRKARL 214



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 38/106 (35%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y          L     T  L+    I   I   L  A RLS  +++ ++   YV VF
Sbjct: 1   MDYALMQRVFPFFLEAAWITILLSVLTAILGLICAMLGTAARLSRFRVLRFLGAAYVSVF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           R  P L+ +F LY     +    D       G+ +N       T+ 
Sbjct: 61  RGTPALIQLFILYFGGPQIGIQLDAFEAGVIGLGVNVGAYMTETMR 106


>gi|251783113|ref|YP_002997416.1| truncated amino acid ABC transporter permease [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391743|dbj|BAH82202.1| truncated amino acid ABC transporter permease protein
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
          Length = 267

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+       VF  +L +
Sbjct: 2   TSVFLTSGWAWYDQLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLAGAVFGLILAL 61

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + ++      +  +       P+  +    + G P LV + L Y     F K +  ++ F
Sbjct: 62  IFAIVKINKVKILY-------PIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 114

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 115 DWNINAIPASVFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 174

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  +  +    +     +  E  +    +Y S
Sbjct: 175 PNAAVVAIPTLINGLIGLTKGTSLAFNAGIVETFAQAQILGGSDYRYFERYISVALVYWS 234

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI+I      +  ++A+K
Sbjct: 235 ISILIEQVGRLIENRMAIK 253


>gi|330428743|gb|AEC20077.1| amino-acid ABC transporter permease y4tF [Pusillimonas sp. T7-7]
          Length = 223

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 8/211 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V+S +LG   + FA  + +     T K++ + +I  F   G   LV +   + 
Sbjct: 15  WVTIQLTVYSTILGAFFA-FAFGIGKLSSNWTAKSVSIFFIEIF--RGTSLLVQL---FW 68

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F  P+LGQ   +G     P  ++  +ALS    A+ AE+VR  + AVP  Q EAA AL
Sbjct: 69  LYFALPLLGQ--AVGIDLRLPPVVAGTLALSLNIGAYGAEVVRGAIQAVPPTQHEAAKAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
             T R+    + LPQA+  ++P   +  +  LK+++L   +   DL      I N T  +
Sbjct: 127 DFTPRQVLWRISLPQAIPEMMPSFGNLAVQNLKDTALVSLISLGDLAFRAEQIRNFTQDS 186

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + I  + +F+Y  +++++   M  L   +  
Sbjct: 187 VTIYTLLLFMYFGMALVLTAIMKLLERSVGR 217



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 33/70 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY+T +L G   T  L     I         G G+LS+N     +   ++E+FR    LV
Sbjct: 5   SYSTPLLQGAWVTIQLTVYSTILGAFFAFAFGIGKLSSNWTAKSVSIFFIEIFRGTSLLV 64

Query: 144 VIFFLYKSVL 153
            +F+LY ++ 
Sbjct: 65  QLFWLYFALP 74


>gi|90412873|ref|ZP_01220873.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium profundum 3TCK]
 gi|90326232|gb|EAS42659.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium profundum 3TCK]
          Length = 225

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 92/219 (42%), Gaps = 9/219 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                       T   +   + V+G+++++    ++R+            YI  F   G 
Sbjct: 7   FESWDLYLDGFITTVWMVAVALVIGLIIAIPVG-IARNSKNPMIYFPAWAYIYFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + L Y        L Q   + G+     +          TAA+ +EI+R  + ++
Sbjct: 64  PLLIQLYLVYY------GLSQLIEVQGTLWQEAWFCALFVFILNTAAYTSEIIRGAINSL 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G++EAA A G++  +A R ++LP AMR  +P  +++ + ++  S++A  V   DL   
Sbjct: 118 PKGEIEAAKAYGMSTPQAFRRIILPSAMRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGA 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              + ++     E  L     Y+ L+  I     +L   
Sbjct: 178 ARIVNSRYYAPFESYLFAGMCYMVLTFTIIWGFKKLEQH 216



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L GF+ T W+    ++   II   VG  R S N ++ +    Y+  FR  P L+ +
Sbjct: 10  WDLYLDGFITTVWMVAVALVIGLIIAIPVGIARNSKNPMIYFPAWAYIYFFRGTPLLIQL 69

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           + +Y  +  ++ +        +   L    L+    T +      
Sbjct: 70  YLVYYGLSQLIEVQGTLWQEAWFCALFVFILNTAAYTSEIIRGAI 114


>gi|261822131|ref|YP_003260237.1| glutamine ABC transporter permease [Pectobacterium wasabiae WPP163]
 gi|261606144|gb|ACX88630.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 219

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L            I V   + G+V+ + A   +R +       + L++I
Sbjct: 1   MQFDWSAIWPSLPLLMEGAKMTLLISVLGLIGGLVIGVVAG-FARAYGGWFSSRISLVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+      I  S     F +  + +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVMFIY---FALPM------IFTSVRIDPFAAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++  G  EA +ALGL+     R V+ P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++++++  + RL  ++ +
Sbjct: 169 GVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFILRRLERRLKI 218


>gi|209546328|ref|YP_002278218.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539185|gb|ACI59118.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 213

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +    F  + +     +    FV G +  L    L+R       + L   YI+ F   
Sbjct: 1   MGHDEFVFLLIGLKWTVVLSAVGFVCGCIAGLGV-ALARVSGNPLLERLTAGYIAVF--Q 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + Y                   +   ++++ I L+ + +A++ EI R  + 
Sbjct: 58  GTPLLMQLFVVYY-----------GLALIGLMLDAWVAVAIGLTLHASAYLGEIWRGSIE 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ EAA AL L +    R V+LPQA+R  +P      + L+K +SLA  VGF +L 
Sbjct: 107 AVPRGQTEAAKALSLRYVSRMRDVILPQALRISLPATIGFLVQLIKGTSLASIVGFTELT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  I NQ  Q + +  +   +Y  +   + +   RL  K A   +
Sbjct: 167 RAGNIISNQIFQPLTVFGVVGILYFLMCCPLTILGARLERKFAASAR 213



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 42/99 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   T  L+  G +   I G  V   R+S N L+  +   Y+ VF+  P L+ +F +
Sbjct: 9   LLIGLKWTVVLSAVGFVCGCIAGLGVALARVSGNPLLERLTAGYIAVFQGTPLLMQLFVV 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +  + D  + +  G+ L+              A
Sbjct: 69  YYGLALIGLMLDAWVAVAIGLTLHASAYLGEIWRGSIEA 107


>gi|294793250|ref|ZP_06758396.1| probable amino-acid permease protein YxeN [Veillonella sp. 6_1_27]
 gi|313893815|ref|ZP_07827381.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|294456195|gb|EFG24559.1| probable amino-acid permease protein YxeN [Veillonella sp. 6_1_27]
 gi|313441379|gb|EFR59805.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 238

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 1/227 (0%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                       +     I   S  LG +L L +  L ++        L  LY+      
Sbjct: 9   YIYGTFFAVIPYVKVTLMITFLSVGLGTILGLLSCVLQQN-KVPVLSQLSYLYVLLCRSI 67

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L+ +           +  Q          P      + L+ +T A+++EI R+ L 
Sbjct: 68  PNMVLLYLVYYGLPILFLALEDQTGVHVPFEKVPATFVAVVGLTLHTGAYLSEIFRAALQ 127

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQMEAA A+G+T  +A R ++LPQA    +P  T+Q+LN +K++S+   +   +L 
Sbjct: 128 SVPKGQMEAAQAIGMTWFQAFRRIVLPQATVFALPLFTNQFLNTMKSTSIVFVITVIELF 187

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                   +  Q  E  ++   ++  + I+     +RL    +  ++
Sbjct: 188 GAAKLYTEENSQYFEAYIVVAGLFWVMGIVFEFIFHRLEVYASKYKR 234


>gi|15600348|ref|NP_253842.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|107104255|ref|ZP_01368173.1| hypothetical protein PaerPA_01005329 [Pseudomonas aeruginosa PACS2]
 gi|116053302|ref|YP_793626.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894255|ref|YP_002443124.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238142|ref|ZP_04931465.1| hypothetical protein PACG_04264 [Pseudomonas aeruginosa C3719]
 gi|296392009|ref|ZP_06881484.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|313110216|ref|ZP_07796113.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter membrane protein [Pseudomonas aeruginosa
           39016]
 gi|9951456|gb|AAG08540.1|AE004928_6 amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|115588523|gb|ABJ14538.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170073|gb|EAZ55584.1| hypothetical protein PACG_04264 [Pseudomonas aeruginosa C3719]
 gi|218774483|emb|CAW30300.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310882615|gb|EFQ41209.1| amino acid (lysine/arginine/ornithine/histidine/octopine) ABC
           transporter membrane protein [Pseudomonas aeruginosa
           39016]
          Length = 230

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 113/228 (49%), Gaps = 17/228 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L    LT++  A   V    L + L +   R SRH++ +      + Y   F   
Sbjct: 10  WMPKMLQGAALTLELLAIAVVAGLALALPLGIA--RASRHWYVR-----AVPYAYIFFFR 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVR 286
           G P L+ + + Y        L QF  +  S   P     +    + ++ +TAA+IAEI+R
Sbjct: 63  GTPLLLQLFIVYY------GLAQFEEVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILR 116

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +VP G++EAA ALG++ R+A   ++LP+A+R  +P  +++ + +LK S++   V  
Sbjct: 117 GAIHSVPVGEVEAARALGMSRRQALWHIILPRAVRIGLPAYSNEVILMLKASAVVYTVTL 176

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            D++ +  TII +T +++    +   +YL ++I++      +   + +
Sbjct: 177 FDIMGMARTIIARTYESMLFFCLAGALYLVITIVLTRIFRLIERWLRV 224



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 7/208 (3%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L    ++    +   +G  R S +  V  +   Y+  FR  P L+ 
Sbjct: 10  WMPKMLQGAALTLELLAIAVVAGLALALPLGIARASRHWYVRAVPYAYIFFFRGTPLLLQ 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF---VFSFVLGIV-- 199
           +F +Y  +     +   +             L+    T    A+I    + S  +G V  
Sbjct: 70  LFIVYYGLAQFEEVRKSAFWPYLRDPYWCALLTMTLHTAAYIAEILRGAIHSVPVGEVEA 129

Query: 200 -LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
             +L  +R    +H    +A+ +  +  +    +  L   A+ Y +     +      I 
Sbjct: 130 ARALGMSRRQALWHIILPRAVRIG-LPAYSNEVILMLKASAVVYTVTLFDIMGMARTIIA 188

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +  S  F  L  AL       +  I R
Sbjct: 189 RTYESMLFFCLAGALYLVITIVLTRIFR 216


>gi|323697764|ref|ZP_08109676.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457696|gb|EGB13561.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 294

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 12/245 (4%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA-- 204
             Y     VLP          G +           T+  +    + + VLG+V+ LF   
Sbjct: 37  LNYHWKWEVLPQFLVRFDERTGSWAPGLLTQGLFTTIRLSVWSGLLAMVLGVVVGLFRVS 96

Query: 205 ----TRLSRHFHEKTGKALPLLYISTFLIFG-----LPTLVLIALKYQLHFDKPVLGQFN 255
                R     +    +  P L +     F      +  L +  L Y L  D        
Sbjct: 97  PSLFKRQVGAVYVGLIRNTPPLVLIFVFYFFIGDQIMSLLGVERLIYALS-DGAREALSW 155

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F G     P F+S  I L+ + AA+IAEIVR+G+ +V  GQ EAA   GLT  ++   V+
Sbjct: 156 FFGPMNRFPRFLSALITLALFEAAYIAEIVRAGIESVEPGQWEAAAGTGLTRTQSLVHVI 215

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA++ ++P L  Q+++++K+S++   +   +L      ++  T ++ EI  + + +Y 
Sbjct: 216 LPQALQRMLPALAGQFISIIKDSAIVSVISIEELTFQAQQLMTTTYRSFEIWTLVLVMYF 275

Query: 376 SLSIM 380
            L+ +
Sbjct: 276 VLTFL 280



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 63/175 (36%), Gaps = 13/175 (7%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS- 81
           R+       ++   L  +F + +      +          +  E     + Q +V +   
Sbjct: 8   RLRITLPDAVILAALAGVFGYILFKAATGL-------NYHWKWEV----LPQFLVRFDER 56

Query: 82  DSSYATAIL-VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             S+A  +L  G   T  L+    + A ++G +VG  R+S +     +  VYV + RN P
Sbjct: 57  TGSWAPGLLTQGLFTTIRLSVWSGLLAMVLGVVVGLFRVSPSLFKRQVGAVYVGLIRNTP 116

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           PLV+IF  Y  +   +        L + +    R               F+ + +
Sbjct: 117 PLVLIFVFYFFIGDQIMSLLGVERLIYALSDGAREALSWFFGPMNRFPRFLSALI 171


>gi|322832078|ref|YP_004212105.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167279|gb|ADW72978.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 219

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L            I V   V G+++ + A   +R F       + L++I
Sbjct: 1   MQFDWSVIWPALPILLEGAKMTLWISVLGLVGGLIIGVIAG-FARAFGGWFSSNVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P++              F +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIVVQVMFIY---FALPMMVP------DLRIDPFSAAVVTIIINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++  G  EA +ALGL+ R   R +++P A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHNGFREAGLALGLSRRATLRYIIMPLALRRMLPPLGNQWIVSIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL +++ ++  + RL  K+ +
Sbjct: 169 GVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLRRLERKLKI 218


>gi|307708312|ref|ZP_07644779.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus mitis NCTC 12261]
 gi|307615758|gb|EFN94964.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus mitis NCTC 12261]
          Length = 225

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y SL   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKMEQ 217



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|153830814|ref|ZP_01983481.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|148873698|gb|EDL71833.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
          Length = 223

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 111/228 (48%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++  +  V  ++L+LF   + R F       L  LYI
Sbjct: 1   MGFDFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANI-RVFKVPVLDPLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV + L   L++  P +              F +  I L+ + AA++AE 
Sbjct: 60  SFF--RGTPLLVQLFL---LYYGLPQVFSL-----LVGLDAFSAAVIGLTLHFAAYMAES 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +
Sbjct: 110 IRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 170 GVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ A I+   +   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVL 156
           Y  +  V 
Sbjct: 75  YYGLPQVF 82


>gi|126208816|ref|YP_001054041.1| arginine transporter permease subunit ArtQ [Actinobacillus
           pleuropneumoniae L20]
 gi|126097608|gb|ABN74436.1| arginine transport system permease protein ArtQ [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 223

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  L            + + S ++G++LS+    L         K      +   L+ 
Sbjct: 1   MFSEYLPLIYSATLMTLGLALTSLIVGLLLSMLFVVLETSKQPCISKPTS---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +        ++  S     F    +ALS   +A+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEKITSEYVEFS----AFSCGVLALSLIFSAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWESGAALGLSRAHTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQTDLINTNEHQPFTWYGLAALIYLAITLISQVIIAGLEKRFTRFER 220


>gi|254173251|ref|ZP_04879924.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Thermococcus sp. AM4]
 gi|214032660|gb|EEB73489.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Thermococcus sp. AM4]
          Length = 229

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 111/220 (50%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L        T   + V S  LG+++ L    L   +  KT + + ++Y  T     L  +
Sbjct: 13  LRMLIDGAKTTIILSVLSIALGLLIGL-PVALMETYGGKTLRRIAMVYEGT-----LRGI 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+A+ + + +  P+L              F++  + L   ++A+ ++I RSG+ AV  G
Sbjct: 67  PLLAIYFVIFYSMPMLIGLGL-------SPFLAAVVGLGIRSSAYQSQIFRSGIQAVDEG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA++LG++  +  R ++LPQA+R  IP   ++Y+ +LK++S+A+A+G  +L      
Sbjct: 120 QIEAAVSLGMSQWQIIRHIVLPQALRMSIPAWMNEYVIVLKDTSIALALGIVELTRQATY 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++ T +      +    YL++ + +  F N +  K  +K
Sbjct: 180 LVSVTAEPFRYYGLAALFYLAMVLPLTYFANWMGKKYGIK 219



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  L+   +    +IG  V        K +  I  VY    R IP L + 
Sbjct: 13  LRMLIDGAKTTIILSVLSIALGLLIGLPVALMETYGGKTLRRIAMVYEGTLRGIPLLAIY 72

Query: 146 FFLYKSVL 153
           F ++ S+ 
Sbjct: 73  FVIFYSMP 80


>gi|307544139|ref|YP_003896618.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216163|emb|CBV41433.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 234

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 8/216 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ V S +L +VL L  T  ++         L  LY  T LI G+P LVL+ L +  
Sbjct: 17  VTVELAVLSLILAVVLGLI-TASAKMSRNWLLHRLGTLY--TTLIRGVPDLVLMMLLFFG 73

Query: 244 ----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               ++     L     I       EF++  + +     A++ E  R   +AV  GQ+EA
Sbjct: 74  GQIGVNMFTDWLYARFDIDIFININEFVAGVVTIGLIFGAYMGETFRGAFLAVDNGQIEA 133

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++H    R +  PQ MR  +P L++ ++ LLK ++L   +G +D+V V       
Sbjct: 134 GRAYGMSHWLVFRRIRFPQMMRHALPGLSNNWMVLLKTTALVSVIGLSDMVRVAAEASKA 193

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T +    ++I   +YL ++ +      RL  +  + 
Sbjct: 194 TREPFTFMIIVAIVYLLIASVSEWGFARLQKRYDIG 229



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G + T  LA   +I A ++G +  + ++S N L+  +  +Y  + R +P LV+
Sbjct: 7   YGPRLAEGALVTVELAVLSLILAVVLGLITASAKMSRNWLLHRLGTLYTTLIRGVPDLVL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +  L+      + +    +   F        +       +  A +     + G  + 
Sbjct: 67  MMLLFFGGQIGVNMFTDWLYARF-------DIDIFININEFVAGVVTIGLIFGAYMG 116


>gi|323485322|ref|ZP_08090671.1| hypothetical protein HMPREF9474_02422 [Clostridium symbiosum
           WAL-14163]
 gi|323694083|ref|ZP_08108262.1| hypothetical protein HMPREF9475_03125 [Clostridium symbiosum
           WAL-14673]
 gi|323401358|gb|EGA93707.1| hypothetical protein HMPREF9474_02422 [Clostridium symbiosum
           WAL-14163]
 gi|323501800|gb|EGB17683.1| hypothetical protein HMPREF9475_03125 [Clostridium symbiosum
           WAL-14673]
          Length = 221

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 17/234 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++          L   T T+   A    F  ++G++L++      R    K  +     Y
Sbjct: 5   MIKMWDRYGFVYLQGLTGTLCLAAITVFFGTLIGMILAIM-----RLSRVKPFQWFVRFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  +++ G P L+ +               F          +   + IAL    ++++AE
Sbjct: 60  I--WVLRGTPILLQLYF----------FWIFLPRVLPVKISDSSCIIIALIINASSYVAE 107

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R+G+ AV +GQ EAA +LG+T       ++LPQA+++I+P L ++++ ++K +SLA  
Sbjct: 108 VIRAGIQAVDKGQTEAARSLGMTGSHTMTQIILPQAIKNILPALGNEFITMIKQASLASV 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               +L +   TI + T + +E ++I   IYL ++ ++   M     ++   E+
Sbjct: 168 FFINELTTSYKTISSATFRPVEALMIAGIIYLMVTTVLGKIMEYAEWRMNRNER 221



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 34/75 (45%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G   T  LA   +   T+IG ++   RLS  K   W  R Y+ V R  P L
Sbjct: 10  DRYGFVYLQGLTGTLCLAAITVFFGTLIGMILAIMRLSRVKPFQWFVRFYIWVLRGTPIL 69

Query: 143 VVIFFLYKSVLSVLP 157
           + ++F +  +  VLP
Sbjct: 70  LQLYFFWIFLPRVLP 84


>gi|242237974|ref|YP_002986155.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130031|gb|ACS84333.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 306

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 15/265 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L  +        S+         +  G F N   L     T+       +FS ++G  L+
Sbjct: 31  LFALLVFAGLAESIAFNTRWEWPVFAGYFFNPVILEGLGRTLLLTLSGTLFSIIVGTGLA 90

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L     +R       + L  LYI  F    LP ++++ + Y   +    L       G T
Sbjct: 91  L-----ARLSSSWLLRTLAWLYIWLF--RSLPLILVLIILYNFSYLYDTLSLGIPFTGIT 143

Query: 262 VSP--------EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           +           F    I L+   +A+ AEI+R G++ V  GQ EAA ALGL   + T  
Sbjct: 144 ILSASTIDVLGPFSVAVIGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWR 203

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQA+R+I+P   ++ ++L K +S+   +   +L      I N+T Q I ++++    
Sbjct: 204 IILPQALRAILPTGFNEIISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATLW 263

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           YL+++ ++++    +   +A    +
Sbjct: 264 YLAITSVLSVLQYHVERYVARGAVR 288


>gi|224826756|ref|ZP_03699856.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224600976|gb|EEG07159.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 247

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +S    T+      ++ + +LG VL +      R    KT   +   Y+  F    +P
Sbjct: 24  WFISGLGWTIAVALAGWIIALILGSVLGVM-----RTLPNKTASGIATAYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK-PVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D  P   Q  F    S  +  ++S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFVWYFLVPDLLPERAQIWFKQDLSPATSAYLSVVVCLGLFTAARVCEQVRTGVQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA+A+G    +  R VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQNYAAMAMGFQQAQIYRYVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY  L++ +  FM  +  ++ +
Sbjct: 197 QTKQTAEFSANLFEAFTLATVIYFVLNMSLMKFMGWVETRLRV 239



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 40/83 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T  +A +G I A I+G+++G  R   NK  + I   YVE+FRN+P LV 
Sbjct: 21  YLDWFISGLGWTIAVALAGWIIALILGSVLGVMRTLPNKTASGIATAYVELFRNVPLLVQ 80

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +F  Y  V  +LP          
Sbjct: 81  LFVWYFLVPDLLPERAQIWFKQD 103


>gi|325977608|ref|YP_004287324.1| amino acid ABC transporter membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325177536|emb|CBZ47580.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 267

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 2/184 (1%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLY 270
            +T    P+  +    + G P LV + L Y     F K +  ++ F       P  +   
Sbjct: 69  NRTKVLYPIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLKIRYGFDWNINAIPASVFAV 128

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
            A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 129 TAFAFNEAAYTSETIRAAIQAVDVGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINS 188

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K +SLA   G  ++ +    +     +  E  +    +Y  +SI+I      +  
Sbjct: 189 LIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIEQIGRLIEK 248

Query: 391 KIAL 394
           ++ +
Sbjct: 249 RMDI 252


>gi|319795336|ref|YP_004156976.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315597799|gb|ADU38865.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 241

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
            V        N  L    LT+   +   V +  LGIVL L           +      L 
Sbjct: 9   WVYFLIGQYPNGPLGGLVLTLLLASCGLVLALPLGIVLGLA----------RVSPWRWLR 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +  T  +F +  L L+ + +  +F  P L           + +F ++ IAL  + AA++A
Sbjct: 59  WPVTGFVFVVRGLPLLMVIFWAYFFLPSLTG-------VKTDQFTTMLIALVIFDAAYLA 111

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+  +PRGQME A ALGL++ +A RLV+LPQA+RS++P L +Q+++ +K +SL  
Sbjct: 112 EIVRAGIQGLPRGQMETARALGLSYFRAMRLVVLPQALRSMLPSLVNQFVSTIKETSLGY 171

Query: 343 AVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +G A++  +   I  Q   +  +I LI    Y  L   ++ F   L  ++A +
Sbjct: 172 IIGLAEVSFIATQINTQVFTKPAQIYLILGGTYFILCFGLSRFAYWLERRLARR 225



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A  G++ A  +G ++G  R+S  + + W    +V V R +P L+VIF+ Y  + S+  + 
Sbjct: 32  ASCGLVLALPLGIVLGLARVSPWRWLRWPVTGFVFVVRGLPLLMVIFWAYFFLPSLTGVK 91

Query: 160 DHSIVLP 166
                  
Sbjct: 92  TDQFTTM 98


>gi|237807674|ref|YP_002892114.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237499935|gb|ACQ92528.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 246

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
             + L++    +  K +   Y  T ++ G+P L+L+ L +                    
Sbjct: 34  MMSALAKLSKNRLAKGVATFY--TTIVRGIPDLILMMLIFFGGQIFLNFLCTQINERINN 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L    P     +++        F++  +++     A++AE  R  ++AV RGQ+EAA A
Sbjct: 92  WLTESNPDHEWISYVPDYIDVSPFIAGVLSIGFIFGAYMAETFRGAILAVERGQLEAAYA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++  +  R VL PQ +R  +P   + +L LLK ++L   +G  D+V   G     T  
Sbjct: 152 YGMSPWQVFRRVLFPQMVRHALPGFGNNWLVLLKTTALVSVIGLDDMVRKAGLAAGSTQL 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +     + A+K +
Sbjct: 212 PFTFYMAVALIFLGFTAISTALLRWAEVRYAIKTR 246


>gi|148652492|ref|YP_001279585.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148571576|gb|ABQ93635.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 248

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 9/224 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              LS     +      ++ +  +G VL +      R    KT + +  +Y++ F    +
Sbjct: 23  YWILSGLGWLLLIGTIAWILALGIGTVLGIM-----RTLPSKTARTIGTMYVTFF--RNI 75

Query: 233 PTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P LV +   + +   +  PVL ++ + G S      +S  I L  +TAA I E VR+G+ 
Sbjct: 76  PLLVQLFFWFYVAPGWLTPVLQEWWYKGLSPNMSAMISASIGLGLFTAARITEQVRTGIQ 135

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P GQ  AA ALG +  +A R VLLPQA R I+PPL+S+  N  KN+S+A  VG  +L+
Sbjct: 136 SLPEGQHNAAYALGFSTAQAYRQVLLPQAFRVILPPLSSELTNCYKNASIASLVGVMELI 195

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S   TI   T   IEI      IYL  ++ +   M  +  K+ +
Sbjct: 196 SQTKTISEYTQNNIEIYTYATIIYLLFNLSLIGIMGLIEQKLRI 239



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 32/83 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G      +     I A  IGT++G  R   +K    I  +YV  FRNIP LV 
Sbjct: 21  YLYWILSGLGWLLLIGTIAWILALGIGTVLGIMRTLPSKTARTIGTMYVTFFRNIPLLVQ 80

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +FF +      L           
Sbjct: 81  LFFWFYVAPGWLTPVLQEWWYKG 103


>gi|15675528|ref|NP_269702.1| putative amino acid ABC transporter permease [Streptococcus
           pyogenes M1 GAS]
 gi|71911176|ref|YP_282726.1| amino acid ABC transporter permease [Streptococcus pyogenes
           MGAS5005]
 gi|13622728|gb|AAK34423.1| putative amino acid ABC transproter (permease protein)
           [Streptococcus pyogenes M1 GAS]
 gi|71853958|gb|AAZ51981.1| amino acid ABC transporter permease protein [Streptococcus pyogenes
           MGAS5005]
          Length = 267

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+        F  VL +
Sbjct: 2   TSVFLTSGWAFYDYLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLSGATFGLVLAL 61

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + +L      +  +       P+  I    + G P LV + L Y     F K +  ++ F
Sbjct: 62  IFALVKINKVKLLY-------PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 114

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 115 DWNVNAIPASIFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 174

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  ++ +    +     +  E  +    +Y S
Sbjct: 175 PNATVVAIPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWS 234

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI++      +  K+A+K
Sbjct: 235 ISILMEQVGRLIENKMAIK 253


>gi|116617559|ref|YP_817930.1| ABC-type amino acid transport system, permease and periplasmic
           component [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096406|gb|ABJ61557.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter substrate-binding protein, PAAT
           family [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 481

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 17/218 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L    LT++      + + + G++L +              + L    I  F       
Sbjct: 280 FLKGLWLTIELTVLAIILASIWGVILGVMG-----VSQNSAVRGLSTTLIYIFR-----G 329

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+ L + ++   P +         T  P F +  I L     A+    VR G  AV +
Sbjct: 330 LPLMVLAFFIYIGLPGVIG-------TKIPAFTAGLITLILNEGAYTGAFVRGGFEAVDK 382

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEAA +LG T+ ++ R V++PQ ++ ++P   +Q++  LK++S+  A+G  +L   G 
Sbjct: 383 GQMEAARSLGFTYNRSMRKVIMPQGLKIMVPSFINQFIITLKDTSILSAIGILELTQTGT 442

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I+ +  Q   +  I   IYL +  ++    N    KI
Sbjct: 443 LIVARNSQGFRVWAIIAIIYLIIITLLTWLSNWAQKKI 480



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 33/66 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  L    +I A+I G ++G   +S N  V  +    + +FR +P +V+ FF
Sbjct: 279 AFLKGLWLTIELTVLAIILASIWGVILGVMGVSQNSAVRGLSTTLIYIFRGLPLMVLAFF 338

Query: 148 LYKSVL 153
           +Y  + 
Sbjct: 339 IYIGLP 344


>gi|329295880|ref|ZP_08253216.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 214

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 15/202 (7%)

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L + A R+SR    +        YI  F   G P L+ + L Y        LGQF  I  
Sbjct: 9   LGILALRMSRW---RLLSGFARGYILVF--RGSPLLIQLFLIYY------GLGQFGVIRH 57

Query: 260 STVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           S V P     F+   +ALS  TAA+ AEI+R  L+AVP GQ+EA +A G++     R ++
Sbjct: 58  SFVWPFLREPFICAVLALSLCTAAYTAEILRGALLAVPAGQVEAGLACGMSRWLLLRHII 117

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            P  +R  +P  +++ + L+K+++LA  V   D+  V   II +T + +E+ +    IYL
Sbjct: 118 APIMLRYALPAYSTEAILLVKSTALASLVTVWDVTGVAQQIIQRTYRTMEVFVCAAAIYL 177

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            L+ +I      L  ++    +
Sbjct: 178 ILNFIIVQLYALLERRLTSVHR 199


>gi|299067958|emb|CBJ39172.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CMR15]
          Length = 227

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 6/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +N   L      M  + +I   + V+GIV       + R    K  +    
Sbjct: 1   MAYQFDFTSVNADNLRVLGEGMVLSLEITATAIVVGIVWGTLL-AMMRLSGIKPLQWFGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y++ F       LV++ L + L   + +   FN    + +     S  +A + + AA+ 
Sbjct: 60  AYVNLFRSIP---LVMVLLWFFLIVPQVLQKLFNLSPATDMR--MTSALVAFALFEAAYY 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L +Q + L +++SL 
Sbjct: 115 SEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLV 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +D  +    I  + G+ +E++L   F Y  +    ++ + RL  K+
Sbjct: 175 YVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKRLQKKV 225



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 36/70 (51%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G V +  +  + ++   + GTL+   RLS  K + W  + YV +FR+IP ++V+
Sbjct: 15  LRVLGEGMVLSLEITATAIVVGIVWGTLLAMMRLSGIKPLQWFGQAYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSV 155
            + +  V  V
Sbjct: 75  LWFFLIVPQV 84


>gi|170734488|ref|YP_001766435.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169817730|gb|ACA92313.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 226

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF +G++L+ F T L+R F  +  +A+   YI  F   G P LV + + +    
Sbjct: 24  VPLTLASFAIGLLLA-FGTALTRLFGPRWAQAVVRFYIWLF--RGSPLLVQLFVIFY--- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T
Sbjct: 78  --------GLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R  +LPQA R  +P L++ +++L+K++SLA  +   ++      I   T + + +
Sbjct: 130 RAQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLIL 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 IYL  S +++    RL  +   
Sbjct: 190 YTEAALIYLLFSSVLSSLQRRLELRFGR 217



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G V T  L  +      ++       RL   +    + R Y+ +FR  P LV +F +
Sbjct: 16  LVAGLVFTVPLTLASFAIGLLLAFGTALTRLFGPRWAQAVVRFYIWLFRGSPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + +V  + D       G  LN
Sbjct: 76  FYGLPNVGIVLDPLTAAVIGFSLN 99


>gi|301647046|ref|ZP_07246878.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|301074796|gb|EFK89602.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
          Length = 347

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +    + P+        A+L+G V+         I       L   GR  
Sbjct: 57  WVFIHERFG-QFMYRLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 104

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  I PL+V + +Y    ++  +                     T
Sbjct: 105 -----------YIAAWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 140

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 141 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 194

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 195 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 245

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 246 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 305

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 306 AWLGMSTEGYVFAALIYWIFCFSMSRYSQYLEKRFNTGR 344


>gi|283458861|ref|YP_003363507.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283134922|dbj|BAI65687.1| ABC-type amino acid transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 224

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 14/206 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF + +++ +  +  +R         L  +YI  F   G P LV + + +  
Sbjct: 22  VTIPLSLISFAVALLVGIV-SAGARTSRFAPVNWLAWVYIWVF--RGTPLLVQLFIVFY- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                + +  I +S +T A++AE  RS + A+PRGQ EAA  L 
Sbjct: 78  ----------GLPKVGIALDVWSAAIITMSLHTGAYVAETFRSAVAAIPRGQFEAAATLN 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R V++PQA+R  +P L + +++L+K +SL   +   DL   G  I ++T + +
Sbjct: 128 FTRMQTLRHVVIPQAVRIALPNLGNNFIDLIKGTSLVSVISMVDLFQTGKQIASRTFEPL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
            +      IYL +  ++    + L  
Sbjct: 188 AMYSEVAIIYLVIFTLLTAAQSALEK 213



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  L+      A ++G +    R S    V W+  VY+ VFR  P LV +F ++  +
Sbjct: 20  LAVTIPLSLISFAVALLVGIVSAGARTSRFAPVNWLAWVYIWVFRGTPLLVQLFIVFYGL 79

Query: 153 LSVLPIPDHS 162
             V    D  
Sbjct: 80  PKVGIALDVW 89


>gi|227327468|ref|ZP_03831492.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 221

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 13/231 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +   L    +      +    ++++ + VLG  L L    L R F ++        
Sbjct: 1   MHYQWDFSLVWHNIPVLLKGLGVTLELWLLAGVLGTALGLVLG-LFRVFGKRWLSLPARC 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++  F     P L+ +      ++  PVL    F         F +  +AL+ Y+AA+  
Sbjct: 60  FVEIF--RNTPVLIQLI---WFYYAFPVLVGLQF-------STFGAAALALTLYSAAYCT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+GL ++  GQ E A ALG+ H    R V+LPQ +R+++P LT++ + L K +SLA 
Sbjct: 108 EIFRAGLQSIDHGQWEGAKALGMRHSVILRRVVLPQVLRNMLPALTNRMIELAKVTSLAS 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   +L+  G  + +   + +EI+ +   +Y  L    +    RL  +  
Sbjct: 168 ILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVLIWPGSYLAARLERRFR 218



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++        +L G   T  L     +  T +G ++G  R+   + ++   R +VE+FR
Sbjct: 6   DFSLVWHNIPVLLKGLGVTLELWLLAGVLGTALGLVLGLFRVFGKRWLSLPARCFVEIFR 65

Query: 138 NIPPLVVIFFLYKSVL 153
           N P L+ + + Y +  
Sbjct: 66  NTPVLIQLIWFYYAFP 81


>gi|237808728|ref|YP_002893168.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500989|gb|ACQ93582.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 218

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 14/232 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              F +   L    L       + + +F+ G +  L  T   R    K    L   Y   
Sbjct: 1   MMQFTDWDILRNLLLAARWTLLLSLIAFIGGTLFGLLLT-FMRTSRRKPLVLLVRGYTEL 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P L+ + L +           F           + +  +AL  +++AF+ +I  
Sbjct: 60  F--QGTPLLMQLFLAF-----------FGLSLLGIDVSAWTAATLALVLFSSAFLCDIWS 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + ++P+GQ EA+  LGL+  +  R V+LPQA+R  I P     + ++K ++L   +GF
Sbjct: 107 GCIESLPKGQWEASRCLGLSFFQTMRYVILPQALRVAIAPTVGFSVQVVKGTALTSIIGF 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L   G  + N T Q  ++  +   IY  +   ++LF   L  K+ +  K 
Sbjct: 167 VELTKAGTMLNNATFQPFKVFALVALIYFMICYPLSLFSQFLERKLNVSGKH 218



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+    I  T+ G L+   R S  K +  + R Y E+F+  P 
Sbjct: 6   DWDILRNLLLAARWTLLLSLIAFIGGTLFGLLLTFMRTSRRKPLVLLVRGYTELFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHS 162
           L+ +F  +  +  +       
Sbjct: 66  LMQLFLAFFGLSLLGIDVSAW 86


>gi|206562620|ref|YP_002233383.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|198038660|emb|CAR54620.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
          Length = 229

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    ++L L     ++    +  K++   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVETVKLAVLSLAASLILGLAGAA-AKLSANRVLKSVGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNDVTDLLGWDQIDIDPFVAGVVTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 188 TLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 226


>gi|77456538|ref|YP_346043.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380541|gb|ABA72054.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 231

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 87/188 (46%), Gaps = 3/188 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +                  F +  
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGVPELLWVLLIYFGTVNAMRALGEFLGNPELELSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALGL+  +    +++PQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGVALGLSKWRIFTKLIMPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  + Q     ++   +YL L+++  + M+ L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIGVTVSKQPFTFYMVAALMYLGLTVLAMIGMHLLEK 220

Query: 391 KIALKEKK 398
           + A    +
Sbjct: 221 RAARGFAR 228


>gi|167568073|ref|ZP_02360989.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia oklahomensis EO147]
 gi|167574432|ref|ZP_02367306.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia oklahomensis C6786]
          Length = 220

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 18/237 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            +++   +      L    +T++     FV S VLG+ L+L     +R         + +
Sbjct: 2   PMLMQNLLDFLPILLKGAIVTVEITLCAFVLSSVLGLGLALMRVSSNRALSHAAAAVVNV 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                  I GLP +V +   + ++F  P L              F + +I L    +A+ 
Sbjct: 62  -------IRGLPIIVQL---FYIYFVLPDL--------GVQLSAFQAGFIGLGIAYSAYQ 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+G+ A+ RGQ+EAA ++G+      R V+LPQA R  +PP  +  + +LK+SSLA
Sbjct: 104 AENFRAGIEAIDRGQIEAAQSIGMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  A++   G  I + T Q + +  +   +YL+LS+ +   + R+  ++ +K K+
Sbjct: 164 STITVAEMTRAGQLIASSTFQNMTVYTLVALLYLALSLPLVYGLRRIERRLGIKGKR 220



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +     + ++++G  +   R+S+N+ ++      V V R +P +V +F++
Sbjct: 15  LLKGAIVTVEITLCAFVLSSVLGLGLALMRVSSNRALSHAAAAVVNVIRGLPIIVQLFYI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +  +            G+ +               A 
Sbjct: 75  YFVLPDLGVQLSAFQAGFIGLGIAYSAYQAENFRAGIEAI 114


>gi|145599620|ref|YP_001163696.1| arginine transporter permease subunit ArtQ [Yersinia pestis
           Pestoides F]
 gi|145211316|gb|ABP40723.1| arginine transport system permease protein [Yersinia pestis
           Pestoides F]
          Length = 238

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFA-----TRLSRHFHEKTG-----KALPLLYISTFLIFGLPT 234
               + V +  LG+VL++       +RL    +   G     + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALALGLVLAMLFAVGESSRLKVVSYLTIGWVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+++    + L+     L     +    VSP F+   IAL+   +A+ ++ +R  L AVP
Sbjct: 73  LLMMLSDGFTLNLYLFELPIKLNLDNFEVSP-FLCAVIALALLYSAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 IGQWESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 192 KSIATRTQEPFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 235


>gi|297520268|ref|ZP_06938654.1| arginine transporter permease subunit ArtQ [Escherichia coli OP50]
          Length = 177

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 224 ISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +  F+ FG   L+L ++  + ++     +     I    VSP F+   IALS   AA+ +
Sbjct: 1   MVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVSP-FLCGVIALSLLYAAYAS 59

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           + +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L  
Sbjct: 60  QTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS 119

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   DL+    +I  +T +     ++   IYL ++++    + R++ +    E++
Sbjct: 120 LISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLLSQYILKRIDLRATRFERR 175


>gi|225858443|ref|YP_002739953.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|225721638|gb|ACO17492.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
          Length = 225

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFEQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL+ LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|331658390|ref|ZP_08359352.1| histidine transport system permease protein HisM [Escherichia coli
           TA206]
 gi|331056638|gb|EGI28647.1| histidine transport system permease protein HisM [Escherichia coli
           TA206]
          Length = 227

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 3   WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQF--PIWLFTYIFRGTP 59

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 60  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 119 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 178

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 179 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 216


>gi|218548238|ref|YP_002382029.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia fergusonii ATCC 35469]
 gi|218355779|emb|CAQ88392.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia fergusonii
           ATCC 35469]
 gi|323967748|gb|EGB63160.1| inner membrane transport system [Escherichia coli M863]
 gi|323977492|gb|EGB72578.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324112844|gb|EGC06820.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|327252578|gb|EGE64237.1| histidine transport system permease protein hisM [Escherichia coli
           STEC_7v]
          Length = 238

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|168490506|ref|ZP_02714649.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|183574954|gb|EDT95482.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
          Length = 225

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + V SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAVGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL+ LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAVGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|77405308|ref|ZP_00782404.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77176103|gb|EAO78876.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 230

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 115/236 (48%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F     +       +T+  +  +  F  ++G++++L      +         L   
Sbjct: 1   MNFSFLXQYWSYFNYGVMVTIMISTCVVFFGTIIGVLIALV-----KRTXLHFLTILANF 55

Query: 223 YISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+  F   G P +V I + +  +HF+   L   +F          +   I +S  + A+I
Sbjct: 56  YVWVF--RGTPMVVQIMIAFAWMHFNN--LPTISFGVLDLDFTRLLPGIIIISLNSGAYI 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ AVP GQ+EAA +LG+  +   R V+LPQA ++I+P L ++++ ++K+S+L 
Sbjct: 112 SEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFKNILPALGNEFITIIKDSALL 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G  +L +   +++  T   +  +L   F YL L+ +++  + ++   +    K
Sbjct: 172 QTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQMEKYLGKGVK 227



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    Y +    G + T  ++   +   TIIG L+   + +    +  +   YV VFR 
Sbjct: 3   FSFLXQYWSYFNYGVMVTIMISTCVVFFGTIIGVLIALVKRTXLHFLTILANFYVWVFRG 62

Query: 139 IPPLVVIFFLYKSV 152
            P +V I   +  +
Sbjct: 63  TPMVVQIMIAFAWM 76


>gi|330816077|ref|YP_004359782.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           gladioli BSR3]
 gi|327368470|gb|AEA59826.1| histidine ABC transporter, permease protein HisQ [Burkholderia
           gladioli BSR3]
          Length = 229

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    ++L L    +++    +  + +   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLAAAVILGLLG-AVAKLSANRVMRGIGTAY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNDLTDLLGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GAAYGMSGLRVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + +L  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLRQLERRYSLGVRH 226


>gi|170694470|ref|ZP_02885623.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140604|gb|EDT08779.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 567

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 13/182 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +T  +    YI    + G P L+ +       FD   L    F        E  +
Sbjct: 80  RLSRFRTLNSAAWGYIWF--VRGTPQLLQLVFI----FDALPLIGLRF-------DEVST 126

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I  +   AAF AE+ R+G+++V R Q  AA ALG+      R ++LPQ+MR++IP L 
Sbjct: 127 AVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLRRIILPQSMRAVIPGLA 186

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  + +LK +S+A  +   +L      ++ Q  +   +      IYL L+  I+L    L
Sbjct: 187 NDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFGAAAVIYLFLTSGISLVQVWL 246

Query: 389 NA 390
             
Sbjct: 247 ER 248



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G      +    M    ++G  +   RLS  + +      Y+   R  P L+ + F+
Sbjct: 51  LLGGAWIAVKITLIAMSIGLMLGLGLALMRLSRFRTLNSAAWGYIWFVRGTPQLLQLVFI 110

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  +    D       G  LN    S         +     S     +       L 
Sbjct: 111 FDALPLIGLRFDEVSTAVIGFALNEAAFSAELFRAGILSVNRSQSIAAAALGMGPLLTLR 170

Query: 209 RHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R    ++ +A +P L   T  +  L ++  +    +L F    +   NF   +       
Sbjct: 171 RIILPQSMRAVIPGLANDTIGMLKLTSIASVIFVNELTFRSQQVVGQNFKFFTVFG---A 227

Query: 268 SLYIALSC 275
           +  I L  
Sbjct: 228 AAVIYLFL 235


>gi|269102812|ref|ZP_06155509.1| arginine ABC transporter permease protein ArtQ [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162710|gb|EEZ41206.1| arginine ABC transporter permease protein ArtQ [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 242

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 7/213 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S  +G+VL++           K        +++         +VL      
Sbjct: 15  WMTIQLAFTSLAVGLVLAVIFAA-GEMSRHKLLAWTTTGWVTLLRGLPEILVVLFI---- 69

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F       F   G       F+S  IALS   +A+ ++ +R  L AV +GQ EAA AL
Sbjct: 70  --FFGSSQILFYITGDYIEVSPFLSGVIALSLIFSAYASQTIRGALKAVSKGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +    ++LPQ +R  +P LT+Q+L LLK+++L   +G  DL+         T ++
Sbjct: 128 GLSSGRTFFKIILPQTVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHES 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                    IYL ++++    +  +  K  +++
Sbjct: 188 FTWYATAAAIYLVITLLTQQLIKVVEKKYQIQD 220



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 38/71 (53%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+ ++L     T  LAF+ +    ++  +  AG +S +KL+AW    +V + R +P ++V
Sbjct: 6   YSLSLLEASWMTIQLAFTSLAVGLVLAVIFAAGEMSRHKLLAWTTTGWVTLLRGLPEILV 65

Query: 145 IFFLYKSVLSV 155
           + F++     +
Sbjct: 66  VLFIFFGSSQI 76


>gi|254456259|ref|ZP_05069688.1| ABC transporter permease component [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083261|gb|EDZ60687.1| ABC transporter permease component [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 243

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 124/255 (48%), Gaps = 17/255 (6%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            +NI  L++I  L       L     S     G+      LS  T T+  +    + S  
Sbjct: 1   MKNIFFLLLIIPLSSCTDQELGWFIISPNNIEGLTNLKFLLSGLTTTIYISVVSIIISMF 60

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG+++++ +   ++           L YI+   +  +  + L+ L   +++  P++   +
Sbjct: 61  LGLIVAIPSLAKNKF----------LTYINIGYVEIVRAVPLLVLILWIYYGLPIMTGIS 110

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F         F+S  IAL+   +AF AEI R+G+ ++ + Q EA  +LGL   K  RLV+
Sbjct: 111 F-------SPFVSGIIALAISESAFQAEIFRAGINSIKKAQWEAGSSLGLNFFKRLRLVI 163

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+++I+P + +Q++ +LK SSL   +G  DL      ++  T + +EI    +  YL
Sbjct: 164 LPQAIKNILPAIGNQFVYVLKMSSLVSIIGIGDLTRKANELVVTTYRPLEIYTFLILEYL 223

Query: 376 SLSIMIALFMNRLNA 390
            L ++++ F+ +L  
Sbjct: 224 VLILIVSFFVRKLEK 238



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 40/81 (49%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L G   T +++   +I +  +G +V    L+ NK + +I   YVE+ R +P LV
Sbjct: 35  TNLKFLLSGLTTTIYISVVSIIISMFLGLIVAIPSLAKNKFLTYINIGYVEIVRAVPLLV 94

Query: 144 VIFFLYKSVLSVLPIPDHSIV 164
           +I ++Y  +  +  I     V
Sbjct: 95  LILWIYYGLPIMTGISFSPFV 115


>gi|167589201|ref|ZP_02381589.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 300

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 1/243 (0%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SV+  P     +    F     LS    T+   A   VF  VLG  ++L     SR    
Sbjct: 55  SVIGNPQWGWPVFADWFFAPPVLSGLARTLALTALGAVFGLVLGAFVALARLSRSRLLSA 114

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIA 272
                + L      ++  L    L  L   +    P+    F  +  + +   F++  + 
Sbjct: 115 SAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPLTGITFVDVATTDLISPFLAAVLG 174

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ + AAF AE++R G+++V +GQ+EAA ALGL     T  ++LPQAMR+I+P   +  +
Sbjct: 175 LTLHHAAFSAEVIRGGILSVDQGQLEAAAALGLPRAHQTTRIVLPQAMRAILPTAFNDLI 234

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L K +S+   +   +L      I  +  + I ++++    YL +  +++    ++    
Sbjct: 235 MLAKGTSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSAIQVQVERHY 294

Query: 393 ALK 395
           A  
Sbjct: 295 ARG 297



 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q   P  +D  +A  +L G   T  L   G +   ++G  V   RLS ++L++     ++
Sbjct: 61  QWGWPVFADWFFAPPVLSGLARTLALTALGAVFGLVLGAFVALARLSRSRLLSASAWAFI 120

Query: 134 EVFRNIP 140
            +FR+IP
Sbjct: 121 WLFRSIP 127


>gi|241113571|ref|YP_002973406.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861779|gb|ACS59445.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 12/227 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTF 227
           M  +   +     T+    KI + + +LG  +++     L+             +   + 
Sbjct: 1   MEWDWDFVWQIMPTLLEGFKITLLATILGAAVAMIVGLGLAIARRSPVAGISRTVAFVSE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV +   + +  D                   ++  I +  + A + AE+ R+
Sbjct: 61  FIRGTPLLVQLYFIFYVLPDI-----------GIRLAPLVAGVIGMGIHYATYTAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VPRGQ EAA A  LT R+A   V+LPQA+  +IP L + ++ + K + L  A+   
Sbjct: 110 GIENVPRGQWEAAKATNLTTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L++   +I N   + IE + +    +L +S++  + +  L  + A 
Sbjct: 170 ELMNQAKSIANSNYRYIEPMTLVGVFFLVISLISVVGLRWLEERYAR 216



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 28/81 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         +L GF  T      G   A I+G  +   R S    ++       E  R
Sbjct: 4   DWDFVWQIMPTLLEGFKITLLATILGAAVAMIVGLGLAIARRSPVAGISRTVAFVSEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P LV ++F++  +  +   
Sbjct: 64  GTPLLVQLYFIFYVLPDIGIR 84


>gi|330444606|ref|YP_004377592.1| amino acid ABC transporter permease [Chlamydophila pecorum E58]
 gi|328807716|gb|AEB41889.1| amino acid ABC transporter, permease protein [Chlamydophila pecorum
           E58]
          Length = 204

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 15/217 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                  T+  ++   +    LG+V+       SR+   +  + L   Y++  +I G P 
Sbjct: 1   MFHGCLYTLGISSVAILCGSFLGVVIGTGT---SRYSSCRIFRILGNSYVT--VIRGTPL 55

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            + I + Y   F  P +   +           M+  +AL+  +AA++AE +R G+ A+  
Sbjct: 56  FIQILIIY---FGLPSVICLD-------PSPLMAGIMALTINSAAYLAENIRGGINAISV 105

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+A  LG    +    +L PQ  R+++P L ++++ L+K SS+ + VG  +L  V  
Sbjct: 106 GQWESAKVLGYRPYQTFLYILYPQVFRNVLPSLMNEFIALIKESSILMVVGIPELTKVSK 165

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I+++    +E+  I   +YL ++ + +        K
Sbjct: 166 DIVSRELNPMEMYSICAALYLMMTTVFSYIARVFEEK 202



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAG--RLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           G + T  ++   ++  + +G ++G G  R S+ ++   +   YV V R  P  + I  +Y
Sbjct: 4   GCLYTLGISSVAILCGSFLGVVIGTGTSRYSSCRIFRILGNSYVTVIRGTPLFIQILIIY 63

Query: 150 KSVLSV 155
             + SV
Sbjct: 64  FGLPSV 69


>gi|148977575|ref|ZP_01814154.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145963226|gb|EDK28493.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 225

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T A +   + ++G+ +++    ++R+ H     A    +I  F   G P L
Sbjct: 10  LPIYLGGLWTTAWMVCVALIIGLFVAIPL-AIARNSHNMLINAPAWSFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  + G+     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKGTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  K  R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSTSKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFIIIAIFKFAEKRF 217



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 34/102 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T W+    +I    +   +   R S N L+      ++  FR  P LV ++ +
Sbjct: 13  YLGGLWTTAWMVCVALIIGLFVAIPLAIARNSHNMLINAPAWSFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+        +   L    L+    T +      
Sbjct: 73  YYGMDQFFPVKGTLWENAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|50121892|ref|YP_051059.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49612418|emb|CAG75868.1| ABC transporter permease protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 225

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 17/240 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +          +   L     T+   A   +   + G+VL+       +       + 
Sbjct: 1   MSYQWDFSAIWPYHQLLLEGLWGTIKIGATSILIGMLAGMVLAAM-----KMSPRLLLRL 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             ++ I  +          I   + +++  PV+    F         F +  IALS  + 
Sbjct: 56  PAVMLIGFYRNTPA-----IVHFFWIYYALPVITPLTF-------SPFTAAVIALSAQSG 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF AE+ R  + ++  GQ E A ALG+    A R V+LPQA+R +IPP   +   L+K++
Sbjct: 104 AFYAEVYRGAISSIHPGQWEGAKALGMPQSTALRRVILPQALRRMIPPFIERSFELIKST 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SLA ++ +++L+     + +QT + +E+  +   +Y +L ++I+LF   +  +++L +++
Sbjct: 164 SLASSLAYSELLYQAMQLNSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIEKRLSLADRR 223



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 39/87 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   Y   +L G   T  +  + ++   + G ++ A ++S   L+     + +  +R
Sbjct: 6   DFSAIWPYHQLLLEGLWGTIKIGATSILIGMLAGMVLAAMKMSPRLLLRLPAVMLIGFYR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           N P +V  F++Y ++  + P+      
Sbjct: 66  NTPAIVHFFWIYYALPVITPLTFSPFT 92


>gi|213967001|ref|ZP_03395151.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301385185|ref|ZP_07233603.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302062753|ref|ZP_07254294.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302130126|ref|ZP_07256116.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213928323|gb|EEB61868.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 220

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L     +     +  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPNLLAGLGLGLELALISIAIGCVIGLM-NAFALLSRYRALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFVVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL+  +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLSEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|163793472|ref|ZP_02187447.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
 gi|159181274|gb|EDP65789.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
          Length = 205

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 13/204 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V S  +G V+ L      R  + KT + L   Y+            L+ L + ++F  P 
Sbjct: 13  VISLAIGTVIGLVCGYAFRT-NNKTLRGLVWGYVEFIRNEP-----LLLLIFFVYFGLPA 66

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +       G     ++ S  I LS Y  A++ E+ R+GL +VP   +EAA A+GL   + 
Sbjct: 67  I-------GIRFFDKYESFVITLSIYAGAYLTEVFRAGLTSVPERYVEAAKAIGLKPWQT 119

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V+LP   R ++P L++  ++L K++SLA A+   +L      I   T + +E  L  
Sbjct: 120 QLYVVLPLTFRIVLPSLSNNLISLFKDTSLATAIAIPELTFTARQINANTYRVMEAWLTA 179

Query: 371 MFIYLSLSIMIALFMNRLNAKIAL 394
             +YL+   +IA+ + ++  + ++
Sbjct: 180 SLLYLATCYLIAIALRQIEKRYSV 203



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A   +   T+IG + G    + NK +  +   YVE  RN P L++IFF+Y  + ++    
Sbjct: 12  AVISLAIGTVIGLVCGYAFRTNNKTLRGLVWGYVEFIRNEPLLLLIFFVYFGLPAIGIRF 71

Query: 160 DHSI 163
               
Sbjct: 72  FDKY 75


>gi|194432940|ref|ZP_03065224.1| histidine ABC transporter, permease protein HisM [Shigella
           dysenteriae 1012]
 gi|194418928|gb|EDX35013.1| histidine ABC transporter, permease protein HisM [Shigella
           dysenteriae 1012]
 gi|332090068|gb|EGI95167.1| histidine transport system permease protein hisM [Shigella
           dysenteriae 155-74]
          Length = 238

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQF--PIWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA     +DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVSDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|239817010|ref|YP_002945920.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239803587|gb|ACS20654.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 240

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 118/242 (48%), Gaps = 19/242 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           +  I D+ +    G + N          +   +   V +  LGIVL L           +
Sbjct: 2   LEIIHDYWVYFLIGQYPNGPLGGLVLTLLLA-SCGLVLALPLGIVLGLA----------R 50

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
                 L +  T  +F +  L L+ + +  +F  P +           + +F ++ IAL 
Sbjct: 51  VSPWRWLRWPVTGFVFVVRGLPLLMVIFWAYFFLPSVTG-------VKTDQFTTMLIALV 103

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            + AA++AEIVR+G+  +PRGQME A ALGL + +A RLV+LPQA+RS++P L +Q+++ 
Sbjct: 104 VFDAAYLAEIVRAGIQGLPRGQMETARALGLDYGRAMRLVVLPQALRSMLPSLVNQFVST 163

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +K +SL   +G A++  +   I  Q   +  +I LI    Y  L   ++ F   L  ++A
Sbjct: 164 IKETSLGYIIGLAEVSFIATQINTQVFTKPAQIYLILGLTYFILCFGLSRFAYWLERRLA 223

Query: 394 LK 395
            +
Sbjct: 224 RR 225



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A  G++ A  +G ++G  R+S  + + W    +V V R +P L+VIF+ Y  + SV  + 
Sbjct: 32  ASCGLVLALPLGIVLGLARVSPWRWLRWPVTGFVFVVRGLPLLMVIFWAYFFLPSVTGVK 91

Query: 160 DHSIVLP 166
                  
Sbjct: 92  TDQFTTM 98


>gi|253575106|ref|ZP_04852445.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845562|gb|EES73571.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 261

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 107/232 (46%), Gaps = 7/232 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           PF         S    T+     I   S + G+++  F     R +     +    +Y+S
Sbjct: 4   PFDFSFVISAFSKLWSTLGVTLLIVGGSLLTGMIVG-FVIAFPRLYRIPVLQQFSKVYVS 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P L+ + L Y   +  P L +   +  S  +P    + +    +T AF++E++
Sbjct: 63  FF--RGTPILIQLFLFY---YGLPELLKLVHLDISR-APVLFFVILTYGLHTGAFMSEMI 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+ + AV RGQ+EAA A+G+   +A   ++LPQA+   +P  ++  + LLK++SLA  +G
Sbjct: 117 RASVTAVDRGQVEAAYAIGMKGHQAFTRIVLPQALAVAVPVFSNMVIALLKDTSLAFTLG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L     T+   T   IE  L   FIYL +S  +   +     ++   E+
Sbjct: 177 VMELTGKAQTLGALTQHFIEAYLALAFIYLVVSFTLEKLLRAAERRLLKHEQ 228



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +      T  +    ++   I+G ++   RL    ++    +VYV  FR  P L+ +F  
Sbjct: 17  LWSTLGVTLLIVGGSLLTGMIVGFVIAFPRLYRIPVLQQFSKVYVSFFRGTPILIQLFLF 76

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 77  YYGLPEL 83


>gi|163735167|ref|ZP_02142603.1| ABC transporter permease protein [Roseobacter litoralis Och 149]
 gi|161391625|gb|EDQ15958.1| ABC transporter permease protein [Roseobacter litoralis Och 149]
          Length = 225

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 17/235 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +       +  ++        T+        F   LG++L+L     SR    K      
Sbjct: 2   YEWDFTAVIENSDLLWQGLLGTLAITGTALAFGLPLGLMLAL-----SRLSPRKWLAWSA 56

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
              I  F       LV +   +   F  P+L              +++  I  S  ++AF
Sbjct: 57  GFVIEFFRTTPP--LVQL---FWFFFALPILM-------DIQMTPYLAAAITFSIQSSAF 104

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE+ R+G++++ RGQ EAA A+G+   +A R ++LPQA++ +IP  T + + L+K ++L
Sbjct: 105 FAEVFRAGIVSIERGQWEAARAIGMQRPQAMRRIILPQAIKRMIPAFTERSIELMKTTTL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              V +ADL+     +  +T + IEI      IY ++   ++L +  L  ++A+ 
Sbjct: 165 VATVSYADLLYQANELAQKTFRPIEIFTATALIYFTVIFGLSLCVQALERRLAVS 219



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 66/196 (33%), Gaps = 5/196 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +  + +     +G ++   RLS  K +AW     +E FR  PPLV +F+ 
Sbjct: 16  LWQGLLGTLAITGTALAFGLPLGLMLALSRLSPRKWLAWSAGFVIEFFRTTPPLVQLFWF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  ++ I     +     F       F  +       I    +     + +   +  
Sbjct: 76  FFALPILMDIQMTPYLAAAITFSIQSSAFFAEVFRAGIVSIERGQWEAARAIGMQRPQAM 135

Query: 209 RH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE- 265
           R     +   + +P     +  +    TLV       L +    L Q  F      +   
Sbjct: 136 RRIILPQAIKRMIPAFTERSIELMKTTTLVATVSYADLLYQANELAQKTFRPIEIFTATA 195

Query: 266 --FMSLYIALSCYTAA 279
             + ++   LS    A
Sbjct: 196 LIYFTVIFGLSLCVQA 211


>gi|23500425|ref|NP_699865.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|23464048|gb|AAN33870.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
          Length = 226

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 44  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I+ +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 91  AALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 151 SNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 210

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 211 LERRFGRY 218


>gi|62317471|ref|YP_223324.1| amino acid ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|83269452|ref|YP_418743.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|254690968|ref|ZP_05154222.1| Cystine transport system permease protein [Brucella abortus bv. 6
           str. 870]
 gi|254695721|ref|ZP_05157549.1| Cystine transport system permease protein [Brucella abortus bv. 3
           str. Tulya]
 gi|254698752|ref|ZP_05160580.1| Cystine transport system permease protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254732196|ref|ZP_05190774.1| Cystine transport system permease protein [Brucella abortus bv. 4
           str. 292]
 gi|256256153|ref|ZP_05461689.1| Cystine transport system permease protein [Brucella abortus bv. 9
           str. C68]
 gi|260544708|ref|ZP_05820529.1| cystine transport system permease [Brucella abortus NCTC 8038]
 gi|260759992|ref|ZP_05872340.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|62197664|gb|AAX75963.1| amino acid ABC transporter, permease protein [Brucella abortus bv.
           1 str. 9-941]
 gi|82939726|emb|CAJ12723.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|260097979|gb|EEW81853.1| cystine transport system permease [Brucella abortus NCTC 8038]
 gi|260670310|gb|EEX57250.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
          Length = 226

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 44  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 91  AALIGFTLNIGAYSSEIIRTVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 151 SNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 210

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 211 LERRFGRY 218



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 9   ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 69  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 99


>gi|322372850|ref|ZP_08047386.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321277892|gb|EFX54961.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 232

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 11/215 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         I + + ++ ++L L    +S   H K  + +  +Y+  F     P 
Sbjct: 22  NFGQFAKGFFYTLGISIGALIVALLLGLIFGAMS-STHNKVLRGIARVYVEIF--QNTPL 78

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV   + +                G  + P  ++  + +  YT A+I+EI+R+G+ AVP+
Sbjct: 79  LVQFVVVFYGISIL--------TDGHIMLPISLTAILCVGIYTGAYISEIIRTGIEAVPK 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++ G T+    R+++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++    
Sbjct: 131 GQTEAALSQGFTYADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAK 190

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                T   +        +Y  +   +A +  R  
Sbjct: 191 AWAYDTTNYVPAFAGAALLYFIMCFPLATWARRKE 225



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF  T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV    +
Sbjct: 26  FAKGFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGIARVYVEIFQNTPLLVQFVVV 85

Query: 149 YKSV 152
           +  +
Sbjct: 86  FYGI 89


>gi|322377819|ref|ZP_08052308.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321281242|gb|EFX58253.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 225

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +    +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGILFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y SL   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKIEQ 217



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G L GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGILFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|222087540|ref|YP_002546077.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221724988|gb|ACM28144.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 274

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 2/196 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R    F+ +  + +P+L + +++ F           Y           +        
Sbjct: 81  LILRQIARFYVEVIRGIPILVLLSYIAFVGAPA--FVALYNTATSPLASAGWTEPLLVRD 138

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P      +AL    AAFIAE+ R+G+ AV  GQ+EAA ALGL+  +  R V+ PQA R 
Sbjct: 139 VPLMWRAIVALMIAYAAFIAEVFRAGIQAVDPGQIEAAKALGLSRYRRFRHVIAPQAFRV 198

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I PPL++ ++ ++K+SSL   +G AD+  +     + + +  E   I  +IYL L+I ++
Sbjct: 199 IFPPLSNDFIAMVKDSSLVSVLGVADITQLAKIYSSGSFRYFESYSILAYIYLILTIGLS 258

Query: 383 LFMNRLNAKIALKEKK 398
           L + +   ++  +  +
Sbjct: 259 LVLRKFEKRMRERHMR 274



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 3/133 (2%)

Query: 75  GIVPYTSDSSYATAI---LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
             +   +   YA      + G   T ++       A  +G  +    LS + ++  I R 
Sbjct: 30  TAIAIVTSDLYAQVFKTIVQGIGTTIFVTLVAFALAMALGLGIALLGLSDSLILRQIARF 89

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           YVEV R IP LV++ ++            ++   P         L    + +   A + +
Sbjct: 90  YVEVIRGIPILVLLSYIAFVGAPAFVALYNTATSPLASAGWTEPLLVRDVPLMWRAIVAL 149

Query: 192 FSFVLGIVLSLFA 204
                  +  +F 
Sbjct: 150 MIAYAAFIAEVFR 162


>gi|170739979|ref|YP_001768634.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168194253|gb|ACA16200.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 219

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L F    +     +   +F+LG +       L R    +  + L   Y+   +I 
Sbjct: 4   FSLNHLVFLLEGVGWTVVLTALAFLLGSLAGFGVMLL-RIARARWVRRLAFAYVQ--VIQ 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP L+L+   Y           F            ++  I+L  Y +AF+ EI R  + 
Sbjct: 61  GLPLLILLFCVY-----------FGLGVIGVELSPLVAAAISLMVYCSAFLGEIWRGCVE 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPR Q EAA  L L+  +A   V+LPQA R  +PP    ++ +LK++SLA  VGF +L 
Sbjct: 110 AVPRTQGEAAECLALSRWQALVDVILPQAARIAVPPTVGFFVQVLKSTSLASVVGFVELT 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                I N   Q   +  +   +Y +L   ++ +  RL  K+ +  ++
Sbjct: 170 RASQLINNSIFQPFLVFGLAGALYFALCYPLSRWSRRLERKLHVGRRQ 217



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 38/104 (36%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   +L G   T  L     +  ++ G  V   R++  + V  +   YV+V + +P L+
Sbjct: 7   NHLVFLLEGVGWTVVLTALAFLLGSLAGFGVMLLRIARARWVRRLAFAYVQVIQGLPLLI 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           ++F +Y  +  +       +     + +               A
Sbjct: 67  LLFCVYFGLGVIGVELSPLVAAAISLMVYCSAFLGEIWRGCVEA 110


>gi|309973357|gb|ADO96558.1| Arginine ABC transporter, permease protein ArtQ [Haemophilus
           influenzae R2846]
          Length = 221

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 25/235 (10%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE--------KTGKALPLL 222
           + +  LS           + V S +LG+ LSL    L  +              + LP +
Sbjct: 1   MFSDFLSLMFTAALMTLGLAVCSLILGLFLSLIFVALEANRFVGKPMTVFVALLRGLPEI 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +   + FG   LV +     + F                   F    +ALS   AA+ +
Sbjct: 61  IVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVLALSLIFAAYAS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           + +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L  
Sbjct: 104 QTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVS 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 164 LIGVDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|323492612|ref|ZP_08097756.1| hypothetical protein VIBR0546_00040 [Vibrio brasiliensis LMG 20546]
 gi|323312987|gb|EGA66107.1| hypothetical protein VIBR0546_00040 [Vibrio brasiliensis LMG 20546]
          Length = 365

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + +V            +     +         +T+       V S  +G+
Sbjct: 118 TPKRLWIWLFFVNVYPFFIAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 ALAL-----GRRSEMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFLS 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++LPQ
Sbjct: 223 EGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365


>gi|312868947|ref|ZP_07729127.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
 gi|311095511|gb|EFQ53775.1| ABC transporter, permease protein [Lactobacillus oris PB013-T2-3]
          Length = 488

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 17/218 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T+         + V G++L +     S+  +           IS+ +I+    L
Sbjct: 288 LNGLWMTIQLTIVGIALALVFGLILGVLGVMQSKVANA----------ISSTIIYIFRGL 337

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I L + ++   P     N IG     P F++  + L     A+I  IV+ G  AV  G
Sbjct: 338 PMIVLAFFIYMGLP-----NVIGHKV--PLFLAGVVTLMLDEGAYIGAIVKGGFDAVDPG 390

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL +RKA   V+ PQ ++ ++P L +Q++  LK++S+  A+G  +L   G  
Sbjct: 391 QWEAARSLGLPYRKALVKVVAPQGIKIMVPSLVNQFIITLKDTSILSAIGVMELTQTGTV 450

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+Q  +   + LI   IY+ +  ++    N +  ++A
Sbjct: 451 IISQNMEGFRMWLIIGTIYIIIITLLTWLSNYIQKRMA 488



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 36/71 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  L   G+  A + G ++G   +  +K+   I    + +FR +P +V+ FF
Sbjct: 286 ALLNGLWMTIQLTIVGIALALVFGLILGVLGVMQSKVANAISSTIIYIFRGLPMIVLAFF 345

Query: 148 LYKSVLSVLPI 158
           +Y  + +V+  
Sbjct: 346 IYMGLPNVIGH 356


>gi|237807993|ref|YP_002892433.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500254|gb|ACQ92847.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 365

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 64/293 (21%), Positives = 128/293 (43%), Gaps = 19/293 (6%)

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            + G    S +  V WI   Y      +  L+     +KS+L+ +    +  V+ F ++ 
Sbjct: 86  FIYGFYPESEHWRVNWI---YALTALQVAALLYPKTPHKSILTGIFFVVYPFVVFFLLYG 142

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFL 228
              GL            + +   ++G V +L       L R       ++L +++I  + 
Sbjct: 143 GVFGLDVVETHKWGGLMLTLLLGIIGTVAALPIGILLALGRRSEMPIIRSLSIVFIEFWR 202

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              L T++ +A           +    F+ G     + +   I +  + +A++AE++R G
Sbjct: 203 AVPLITVLFMA----------SVMLPLFLSGEVSMDKLLRAMIGIILFESAYVAEVIRGG 252

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+P+GQ EAA ALGL + K+  L+++PQA++  IP L + ++ L K++SL   +G  D
Sbjct: 253 LQAIPKGQYEAAKALGLNYWKSMGLIIMPQALKLTIPSLVNTFIELFKDTSLVTIIGLFD 312

Query: 349 LVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L++V    ++     G + E       ++      ++ +   L   +    K+
Sbjct: 313 LLAVAKAGLSDPAWLGFSTEAYTFVALVFWVFCFGMSRYSMYLENLLHTGHKR 365


>gi|304389822|ref|ZP_07371781.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304326998|gb|EFL94237.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 303

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 22/218 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKT-----------GKALPLLYISTFLIFGLPTL 235
             + + + +LG V+      L+   H  T            + +  +Y+  F   G P +
Sbjct: 28  VLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLAIIRGIIRVYVEVF--RGTPMI 85

Query: 236 VL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +  + + Y L +      QF  + G ++          +S  T A+IAE VR G+I+V  
Sbjct: 86  LQAVFIYYGLPYFTNNALQFQSMWGVSIF--------VVSINTGAYIAESVRGGIISVDP 137

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E A A+G+TH +    V+LPQA+R+++P + + ++  +K++S+   +GF++  SV  
Sbjct: 138 GQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIKDTSVMFIIGFSEFFSVHK 197

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +     +      I M  YL+L+++ +  + +L  KI
Sbjct: 198 MVSGAVFKYFPSATIEMVGYLTLTLLSSFLLRKLEKKI 235



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 33/99 (33%), Gaps = 12/99 (12%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK------------LVAWICRVY 132
           Y    L G VNT  LA    +   +IG   G      +             ++  I RVY
Sbjct: 16  YGGVYLTGIVNTVLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLAIIRGIIRVY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           VEVFR  P ++   F+Y  +            +      
Sbjct: 76  VEVFRGTPMILQAVFIYYGLPYFTNNALQFQSMWGVSIF 114


>gi|148828331|ref|YP_001293084.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittGG]
 gi|148719573|gb|ABR00701.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittGG]
          Length = 221

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 25/235 (10%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE--------KTGKALPLL 222
           + +  LS           + V S +LG+ LSL  + L  +              + LP +
Sbjct: 1   MFSDFLSLMFTAALMTLGLAVCSLILGLFLSLIFSALEANRFVGKPMTVFVVLLRGLPEI 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +   + FG   LV +     + F                   F    +ALS   AA+ +
Sbjct: 61  IVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVLALSLIFAAYAS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           + +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L  
Sbjct: 104 QTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVS 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 164 LIGVDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|315657127|ref|ZP_07910011.1| amino acid (glutamine) ABC superfamily ATP binding cassette
           transporter substrate binding protein [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315492230|gb|EFU81837.1| amino acid (glutamine) ABC superfamily ATP binding cassette
           transporter substrate binding protein [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 303

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 22/218 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKT-----------GKALPLLYISTFLIFGLPTL 235
             + + + +LG V+      L+   H  T            + +  +Y+  F   G P +
Sbjct: 28  VLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLAIIRGIIRVYVEVF--RGTPMI 85

Query: 236 VL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +  + + Y L +      QF  + G ++          +S  T A+IAE VR G+I+V  
Sbjct: 86  LQAVFIYYGLPYFTNNALQFQSMWGVSIF--------VVSINTGAYIAESVRGGIISVDP 137

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E A A+G+TH +    V+LPQA+R+++P + + ++  +K++S+   +GF++  SV  
Sbjct: 138 GQTEGARAIGMTHFQTMLYVILPQALRNLLPQIGNNFIINIKDTSVMFIIGFSEFFSVHK 197

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +     +      I M  YL+L+++ +  + +L  KI
Sbjct: 198 MVSGAVFKYFPSATIEMVGYLTLTLLSSFLLRKLEKKI 235



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 33/99 (33%), Gaps = 12/99 (12%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK------------LVAWICRVY 132
           Y    L G VNT  LA    +   +IG   G      +             ++  I RVY
Sbjct: 16  YGGVYLTGIVNTVLLAIIATLLGCVIGFACGILNTIPHPSTDPLLKRVVLAIIRGIIRVY 75

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           VEVFR  P ++   F+Y  +            +      
Sbjct: 76  VEVFRGTPMILQAVFIYYGLPYFTNNALQFQSMWGVSIF 114


>gi|163858458|ref|YP_001632756.1| amino acids ABC transporter, permease protein [Bordetella petrii
           DSM 12804]
 gi|163262186|emb|CAP44488.1| amino acids ABC transporter, permease protein [Bordetella petrii]
          Length = 231

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 7/231 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F M  +   +   T  +    ++F  +   G +L++  T ++     +  +A+  L
Sbjct: 1   MDFSFSMLSDPEVVGMLTTGITVTLRLFAGALAGGFLLAMVLTGIN-LIPSRLVRAVVAL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+       +PT+V I + Y   F  P +L +   +  +  + EF    IALS   +A+ 
Sbjct: 60  YVE--YHRNVPTVVQILVWY---FGMPEILPEAIRVWINQGNTEFSFALIALSLNVSAYY 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E +RSG+ A+P  Q+EAA ++GL   +A   V+LPQA+R  +PP+ ++ + L K++SLA
Sbjct: 115 YEDIRSGIRAIPATQVEAARSIGLGAVQALIYVVLPQAVRYAVPPIINRSIILFKDTSLA 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +G  DL      I N T Q  +I +I   IYL ++++I+     L  K 
Sbjct: 175 MVIGVTDLTYQTKRIENATFQTFQIFMISTLIYLCMALLISALGAHLARKY 225



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 34/88 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    +    ++  ++    L  ++LV  +  +YVE  RN+P +V I   
Sbjct: 17  LTTGITVTLRLFAGALAGGFLLAMVLTGINLIPSRLVRAVVALYVEYHRNVPTVVQILVW 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           Y  +  +LP      +       +   +
Sbjct: 77  YFGMPEILPEAIRVWINQGNTEFSFALI 104


>gi|139473300|ref|YP_001128015.1| ABC transporter permease protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134271546|emb|CAM29770.1| ABC transporter permease protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 267

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+        F  VL +
Sbjct: 2   TSVFLTSGWAFYDHLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLSGATFGLVLAL 61

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + +L      +  +       P+  I    + G P LV + L Y     F K +  ++ F
Sbjct: 62  IFALVKINKVKLLY-------PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 114

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++
Sbjct: 115 DWNVNAIPASIFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRVII 174

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SLA   G  ++ +    +     +  E  +    +Y S
Sbjct: 175 PNATVVAIPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWS 234

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI++      +  K+A+K
Sbjct: 235 ISILMEQVGRLIENKMAIK 253


>gi|26991115|ref|NP_746540.1| amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|24986153|gb|AAN70004.1|AE016638_12 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 218

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 12/221 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           +I  F  +L IV +  A  L +    +  +   ++YI  F   G   L
Sbjct: 5   LPLMLQGAWVTLQITFFGSLLAIVAATLA-ALGKMSTWRPLRWFCVVYIEIF--RGTSLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + +    P   + +          +    + L  +  A+ AEI+R  + +V +G
Sbjct: 62  VQLFWLFFVLPLPPFNLELS---------PYTVAIVGLGLHIGAYGAEIMRGAINSVAKG 112

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  AL        R ++LPQA+ + + P T+  + LLKN+SL   +  ADL      
Sbjct: 113 QYEACTALNFRPFTRFRRIILPQALLAAMGPGTNLLIELLKNTSLVSLITLADLSFRARQ 172

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   T + +++  + + +Y  ++  I L M RL   +A   
Sbjct: 173 LDQATFETLKVFALALLMYFVMAQAINLAMRRLERHLARGR 213



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F G + A +  TL   G++S  + + W C VY+E+FR    LV +F+L
Sbjct: 8   MLQGAWVTLQITFFGSLLAIVAATLAALGKMSTWRPLRWFCVVYIEIFRGTSLLVQLFWL 67

Query: 149 YKSVLSVLPI 158
           +  +      
Sbjct: 68  FFVLPLPPFN 77


>gi|254229167|ref|ZP_04922586.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262395517|ref|YP_003287370.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
 gi|151938252|gb|EDN57091.1| ABC transporter, permease protein, putative [Vibrio sp. Ex25]
 gi|262339111|gb|ACY52905.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 306

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 14/231 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---------PLLY 223
                    T+  +     F+ VLG +L L   R SR    +T             PL++
Sbjct: 72  PYFFQGLISTLRLSIWGISFALVLGTLLGLA--RFSRSVWLRTPANTFIQLVRNIPPLVF 129

Query: 224 ISTFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +  F  F     + +     L   +  +P   Q    G   +     S  + +   ++A+
Sbjct: 130 VFIFYFFISNQFIPLLGLEDLLRNYNGEPNALQSFLFGPYNLWENLTSGVLCVGLLSSAY 189

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR+GL ++ +GQ EAA +LGL+     R V+ PQ +++I P L  Q ++L+K++S+
Sbjct: 190 VAEVVRAGLQSIDQGQWEAADSLGLSRWVKYRFVIAPQVLKAITPALAGQTISLVKDTSI 249

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +   ++  VG  + N +G   EI LI    Y  +   ++L    + AK
Sbjct: 250 VSLISIQEMTFVGTEMANSSGYIFEIWLIVGIAYFLICFGLSLIFRHIEAK 300



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  L+  G+  A ++GTL+G  R S +  +      ++++ RNIPPL
Sbjct: 73  YFFQGLISTLRLSIWGISFALVLGTLLGLARFSRSVWLRTPANTFIQLVRNIPPL 127


>gi|320355177|ref|YP_004196516.1| PAAT family amino acid ABC transporter membrane protein
           [Desulfobulbus propionicus DSM 2032]
 gi|320123679|gb|ADW19225.1| amino acid ABC transporter membrane protein, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 262

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 18/258 (6%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT----MDTNAKIFVFSFV 195
           P L+     +  VL +L               N   +            T   I V +  
Sbjct: 16  PSLLSRLLAFALVLLLLSALFFFSFSQLQYGWNWTAVWQYRQKFLHGWMTTLLISVAALG 75

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L +++S+F   L+R       + L +LYI    + G P LV I + + +  D        
Sbjct: 76  LSLLISVF-FALARRSRLLPLRYLAMLYIE--GVRGTPLLVQILVFFYVVADA------- 125

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 ++  ++   + L+ +  A+++EI+R+G+ ++   Q+E+A A+GL+  +  R V+
Sbjct: 126 ----FGINNRYVVGILTLAFFAGAYLSEIIRAGIESIGESQIESARAIGLSPLQTYRFVI 181

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ +R I+PPL  Q+ +L+K+SSL   +  ++       +   T   +E  L     YL
Sbjct: 182 LPQVVRRILPPLAGQFASLVKDSSLLSIIAVSEFTLNAQEVNAFTYSTLESYLPLAVGYL 241

Query: 376 SLSIMIALFMNRLNAKIA 393
            L++ I+LF   L  K  
Sbjct: 242 VLTLPISLFSRHLEQKFR 259



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 34/83 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T+   Y    L G++ T  ++ + +  + +I       R S    + ++  +Y+E  R 
Sbjct: 49  WTAVWQYRQKFLHGWMTTLLISVAALGLSLLISVFFALARRSRLLPLRYLAMLYIEGVRG 108

Query: 139 IPPLVVIFFLYKSVLSVLPIPDH 161
            P LV I   +  V     I + 
Sbjct: 109 TPLLVQILVFFYVVADAFGINNR 131


>gi|312961852|ref|ZP_07776350.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311284111|gb|EFQ62694.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 233

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 86/190 (45%), Gaps = 2/190 (1%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    +  +    LY  T LI  +P LVLI L +             F         F 
Sbjct: 42  AKLSAARWLRVPATLY--TTLIRSVPDLVLILLIFYSLQLWLNDLTETFGWDYFEIDPFT 99

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L     A+  E  R  +++VP GQ+EAA A GL+  +  RLVL PQ MR  +P L
Sbjct: 100 AGVITLGFIYGAYFTENFRGAILSVPVGQLEAATAYGLSRWQRFRLVLFPQLMRFALPGL 159

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L LLK+++L   +G +DLV         T + +  +++   +YL ++ +      R
Sbjct: 160 GNNWLVLLKSTALVSIIGLSDLVKAAQNAGKTTSEPLYFLILAGLVYLVITTLSNRIFKR 219

Query: 388 LNAKIALKEK 397
           L  +  L  K
Sbjct: 220 LERRYNLGIK 229


>gi|119025600|ref|YP_909445.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154487062|ref|ZP_02028469.1| hypothetical protein BIFADO_00900 [Bifidobacterium adolescentis
           L2-32]
 gi|118765184|dbj|BAF39363.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154084925|gb|EDN83970.1| hypothetical protein BIFADO_00900 [Bifidobacterium adolescentis
           L2-32]
          Length = 375

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 113/271 (41%), Gaps = 21/271 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +   +F  +  L+++              +            +  L     
Sbjct: 21  IRIVNWIAGI---IFAVVVVLILMRLHNPPDGENQLSWELWKPALDAEAWTDFYLPGLWA 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    V + V G+V  +      R       + +    +       +  L++   +
Sbjct: 78  TIRASVLAVVGAVVFGLVFGV-----GRLLPSLLIRTISGAIVEFARAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTRTQSLLQIEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++ +++   +Y  +  +++     L +++
Sbjct: 240 NILQTLVVAAVVYFIVCWLLSRLAEWLPSRM 270



 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T   +   ++ A + G + G GRL  + L+  I    V
Sbjct: 56  ELWKPALDAEAWTDFYLPGLWATIRASVLAVVGAVVFGLVFGVGRLLPSLLIRTISGAIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFARAVPVLLLMIFFWRWFAFAGLPSPAYWAVVLALVIYN 155


>gi|325524870|gb|EGD02817.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 229

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLVGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|295400465|ref|ZP_06810443.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312112430|ref|YP_003990746.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|294977368|gb|EFG52968.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311217531|gb|ADP76135.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 234

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 7/230 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + L    L      +    +I   S V GIV+ + A  + R F       L ++Y+S 
Sbjct: 5   FDITLVGEFLPQLVQYLGVTLQILAVSTVFGIVIGIAA-AIPRLFRIPILSQLVVVYVSF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             I G P L+ + L +   +  P L     I  + + P +  + I  S    A  +EI R
Sbjct: 64  --IRGTPILIQLFLIF---YGVPALFLLFDIDLTRMDPLYF-VMITYSLSNGAVFSEIFR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+  GQ EAA ++G++  +    +++PQA+    P + +  ++ LK++SLA  +G 
Sbjct: 118 GAIQAIDYGQTEAAYSVGMSDSQTFFRIIIPQAIGIAFPNMANCIISSLKDTSLAFTIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D+V  G T+I  T  A+E+ +    IY  + +++         ++   +
Sbjct: 178 MDMVGRGETLIASTAHALEVYISLSIIYYIVVLVLEKLFRLFEKRVNRYK 227



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +     +   +IG      RL    +++ +  VYV   R  P L+ +F ++  V
Sbjct: 21  LGVTLQILAVSTVFGIVIGIAAAIPRLFRIPILSQLVVVYVSFIRGTPILIQLFLIFYGV 80

Query: 153 LSVLPIPDHSIVLPFGMFL 171
            ++  + D  +     ++ 
Sbjct: 81  PALFLLFDIDLTRMDPLYF 99


>gi|319939693|ref|ZP_08014052.1| amino acid ABC transporter permease [Streptococcus anginosus
           1_2_62CV]
 gi|319811282|gb|EFW07588.1| amino acid ABC transporter permease [Streptococcus anginosus
           1_2_62CV]
          Length = 269

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 9/206 (4%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            F  +L ++ ++      +  +       PL       + G P LV + L Y        
Sbjct: 54  FFGLILALIFAIVKINRVKILY-------PLQAFFVSFLRGTPVLVQLMLTYYGIPLLLK 106

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G  ++  P ++   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ 
Sbjct: 107 AINLRFGTGLNINAIPAYLFAIVAFAFNEAAYASETIRAAILSVDAGEIEAARSLGMTNG 166

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    V++P A     P L +  + L K +SLA + G  ++ +    +     +  E  +
Sbjct: 167 QVYCRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEIFAQAQILGGADYRYFERFI 226

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               +Y  ++I+I  F   +  K+A+
Sbjct: 227 SVALVYWGVNIVIEAFGRFIEKKMAI 252


>gi|306829073|ref|ZP_07462263.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304428159|gb|EFM31249.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 225

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L + L +    LS   H+   + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMALGIIFGVLSTSKHQ-ILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++ +      + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLISE-----HTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A  +G + G    S ++++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMALGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISEHTIMIPIYW 94


>gi|282881858|ref|ZP_06290509.1| probable amino-acid ABC transporter permease protein [Peptoniphilus
           lacrimalis 315-B]
 gi|300814772|ref|ZP_07095020.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|281298267|gb|EFA90712.1| probable amino-acid ABC transporter permease protein [Peptoniphilus
           lacrimalis 315-B]
 gi|300511159|gb|EFK38411.1| ABC transporter, permease protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 240

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 16/233 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH----FHEKTGKAL 219
           VL           +    T+  +    +F  ++G++     T   ++    F +K    L
Sbjct: 4   VLELFTRYKPLFFNGTLNTLKISIVATIFGLIIGLITGTIRTLPKKNGFGGFLQKVVNLL 63

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              YI+ F   G P +V  +L +           F    G  V  + ++ YI +S  T A
Sbjct: 64  ISAYITLF--RGTPMMVQASLLFY---------GFPLFLGVDVD-KILTAYIIVSVNTGA 111

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++E+VR G+I++ +GQ EA+ A GL+H +    V+ PQ +R+I+P   ++++  +K++S
Sbjct: 112 YMSEVVRGGIISIDKGQWEASRASGLSHIQTMLYVIGPQTLRNILPATGNEFVINIKDTS 171

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +G  +L     T+  Q+    E   I + IYL L+ +I   + ++  ++
Sbjct: 172 VLNVIGVGELFFAAKTVAGQSYSYFETYFIILIIYLLLTTVITEILRQIEKRL 224



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 9/81 (11%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK---------LVAWICRVYVE 134
            Y      G +NT  ++    I   IIG + G  R    K         +V  +   Y+ 
Sbjct: 10  RYKPLFFNGTLNTLKISIVATIFGLIIGLITGTIRTLPKKNGFGGFLQKVVNLLISAYIT 69

Query: 135 VFRNIPPLVVIFFLYKSVLSV 155
           +FR  P +V    L+      
Sbjct: 70  LFRGTPMMVQASLLFYGFPLF 90


>gi|322373587|ref|ZP_08048123.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321278629|gb|EFX55698.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 307

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 113/294 (38%), Gaps = 15/294 (5%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
                + G +  A  ++    ++W+  +          ++ +  +    ++         
Sbjct: 13  WYLQVVFGLIGLAVVVALAIPLSWLVEILWGY------ILQLVAIVFKWIASWMPAGKLF 66

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                     + +    LT+        F  +L +V ++      R  +       P+  
Sbjct: 67  SWKAVFDAVPKIVERLPLTLGLTIAGAFFGLILALVFAVVKINRVRILY-------PIQA 119

Query: 224 ISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +    + G P LV + L Y     F + + G+F         P  +    A +   AA++
Sbjct: 120 VFVSFLRGTPILVQLMLTYYGIPLFLRYLNGEFGLDWNINEIPPAIFAITAFAFNEAAYM 179

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA
Sbjct: 180 SETIRAAIQAVDAGEIEAARSLGMTSAQVYRRVIIPNAAVIATPSLINSLIGLTKGTSLA 239

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + G  ++ +    +     +  E  +    +Y  +SI+I      +   +A+K
Sbjct: 240 FSAGIVEMYAQAQILGGADYRYFERYISVALVYWGISILIENIGRSVENHMAIK 293


>gi|83746636|ref|ZP_00943686.1| GltK [Ralstonia solanacearum UW551]
 gi|207742331|ref|YP_002258723.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           IPO1609]
 gi|83726770|gb|EAP73898.1| GltK [Ralstonia solanacearum UW551]
 gi|206593721|emb|CAQ60648.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           IPO1609]
          Length = 227

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 6/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +N   L      M  + +I V + V+GIV       + R    K  +    
Sbjct: 1   MAYQFDFTSINADNLRVLGEGMVLSLEITVTAIVVGIVWGTLL-AMMRLSGIKPLQWFGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y++ F       LV++ L + L   + +   FN    + +     S  +A + + AA+ 
Sbjct: 60  GYVNLFRSIP---LVMVLLWFFLIVPQVLQKIFNLSPATDMR--MTSALVAFALFEAAYY 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L +Q + L +++SL 
Sbjct: 115 SEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLV 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +D  +    I  + G+ +E++L   F+Y  +    ++ + RL  K+
Sbjct: 175 YVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKRLQKKV 225



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 39/87 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G V +  +  + ++   + GTL+   RLS  K + W  + YV +FR+IP ++V+
Sbjct: 15  LRVLGEGMVLSLEITVTAIVVGIVWGTLLAMMRLSGIKPLQWFGQGYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            + +  V  VL    +          +
Sbjct: 75  LWFFLIVPQVLQKIFNLSPATDMRMTS 101


>gi|126737936|ref|ZP_01753666.1| ABC-type amino acid transport system, permease component
           [Roseobacter sp. SK209-2-6]
 gi|126721329|gb|EBA18033.1| ABC-type amino acid transport system, permease component
           [Roseobacter sp. SK209-2-6]
          Length = 221

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 15/226 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           +               F  + +LG+ ++L    L +    K  +   + YI  F   G  
Sbjct: 9   QYWPRLLAGSGMTVAQFFLAAILGVTIALMMG-LMKLSSNKLIRGSAVTYIEIF--RGTS 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +   Y + F  P+              +F + Y+A+     A+ AE+VR G+++VP
Sbjct: 66  LLVQL---YWIFFVLPLF--------GVTIDKFTAGYVAVGMNIGAYGAELVRGGILSVP 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA+A+ ++  +  + ++LPQA+ +++PP  +  + LLK ++L   +  ADL+   
Sbjct: 115 KGQWEAALAINMSPAQRMQRIILPQALVNMLPPWGNLMIELLKGTALVSLISVADLMFET 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLNAKIALKEKK 398
             I + T  + +     + IY  L+  M+  FM  L   +A K  +
Sbjct: 175 KQINSSTFLSAQAFGAALVIYYILARFMVTPFMRWLEGYMARKMGR 220



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G   T    F   I    I  ++G  +LS+NKL+      Y+E+FR    LV
Sbjct: 9   QYWPRLLAGSGMTVAQFFLAAILGVTIALMMGLMKLSSNKLIRGSAVTYIEIFRGTSLLV 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +++++  +       D        + +N
Sbjct: 69  QLYWIFFVLPLFGVTIDKFTAGYVAVGMN 97


>gi|194397213|ref|YP_002037267.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194356880|gb|ACF55328.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
          Length = 225

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILAHIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQ  R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  +  ++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|20804071|emb|CAD31274.1| PUTATIVE AMINO-ACID ABC TRANSPORTER PERMEASE PROTEIN [Mesorhizobium
           loti R7A]
          Length = 293

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 17/283 (6%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVI-FFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           GR++   ++A +  V + +    P  V I     + +L  L   +   +    ++ +   
Sbjct: 27  GRVAIAFVIAVMFCVNIVLIGFAPLRVQIGIVWAELLLLFLGFFNAFNLNMPFIWEHLPY 86

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +            F   I +     +LS +     G A  L    T    GLP L
Sbjct: 87  LITQGVVTTIYVSAVSLIFASIIAMIAAIAKLSSN-----GFAYALASFYTSFFRGLPLL 141

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I L Y      P L          V     S  +ALS    A++ EI R+G+ ++ RG
Sbjct: 142 IQIYLIY---LGLPQL--------GIVINAVPSGILALSLCVGAYMTEIFRAGIQSIDRG 190

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+ ++G       R ++LPQA+  IIPP+ + ++ +LK+SSL   +G  +L  +  T
Sbjct: 191 QWEASRSIGFGFGLTIRKIILPQALPVIIPPMGNTFIAMLKDSSLVSVLGVWELTFLART 250

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I   T   +E+++    IY  LS  + +  +RL    A  + +
Sbjct: 251 IGQPTFHHMEMLITAAMIYWILSACLEVLQSRLEHHFARSKVR 293


>gi|254508776|ref|ZP_05120888.1| ABC-type amino acid transport system, permease component [Vibrio
           parahaemolyticus 16]
 gi|219548296|gb|EED25309.1| ABC-type amino acid transport system, permease component [Vibrio
           parahaemolyticus 16]
          Length = 365

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/274 (21%), Positives = 122/274 (44%), Gaps = 16/274 (5%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            Y+ +      L       +  + +  +  +  ++   ++    GL            + 
Sbjct: 102 FYITLAIFTVLLAYEKTPKRMWIWLFFVNVYPFIIAALLYGGVFGLEVVETHKWGGLLVT 161

Query: 191 VFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +   ++GIV+SL    A  L R       +++  +YI  +    L T++ +A        
Sbjct: 162 LIIALVGIVVSLPIGVALALGRRSEMPIIRSICTVYIEVWRGVPLITVLFMA-------- 213

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +    F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++
Sbjct: 214 --SVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSY 271

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAI 364
            K   L++LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A 
Sbjct: 272 WKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFAT 331

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +    ++      ++ +   L  K+    K+
Sbjct: 332 ESYVFVALVFWVFCFGMSRYSIWLENKLHTGHKR 365



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ +  IG  +  GR S   ++  IC VY+EV+R +P + V+F   
Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRRSEMPIIRSICTVYIEVWRGVPLITVLFMAS 214

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFAT 205
             +   L     +  L   +       +     +       +    +     + LS +  
Sbjct: 215 VMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKK 274

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSP 264
                  +     +P +  +   +F   +LVLI   +  L   +       ++G +T S 
Sbjct: 275 MGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESY 334

Query: 265 EFMSLYIALSCYTAAFIA 282
            F++L   + C+  +  +
Sbjct: 335 VFVALVFWVFCFGMSRYS 352


>gi|207727926|ref|YP_002256320.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           MolK2]
 gi|206591168|emb|CAQ56780.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           MolK2]
          Length = 227

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 6/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +N   L      M  + +I V + V+GIV       + R    K  +    
Sbjct: 1   MAYQFDFTSINVDNLRVLGEGMVLSLEITVTAIVVGIVWGTLL-AMMRLSGIKPLQWFGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y++ F       LV++ L + L   + +   FN    + +     S  +A + + AA+ 
Sbjct: 60  GYVNLFRSIP---LVMVLLWFFLIVPQVLQKIFNLSPATDMR--MTSALVAFALFEAAYY 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L +Q + L +++SL 
Sbjct: 115 SEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLV 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +D  +    I  + G+ +E++L   F+Y  +    ++ + RL  K+
Sbjct: 175 YVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKRLQKKV 225



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 39/87 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G V +  +  + ++   + GTL+   RLS  K + W  + YV +FR+IP ++V+
Sbjct: 15  LRVLGEGMVLSLEITVTAIVVGIVWGTLLAMMRLSGIKPLQWFGQGYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            + +  V  VL    +          +
Sbjct: 75  LWFFLIVPQVLQKIFNLSPATDMRMTS 101


>gi|306830627|ref|ZP_07463792.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304427135|gb|EFM30242.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 267

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 2/184 (1%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLY 270
            +T    P+  +    + G P LV + L Y     F K +  ++ F       P  +   
Sbjct: 69  NRTRVLYPIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLKIRYGFDWNINAIPASVFAV 128

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
            A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 129 TAFAFNEAAYTSETIRAAIQAVDVGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINS 188

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K +SLA   G  ++ +    +     +  E  +    +Y  +SI+I      +  
Sbjct: 189 LIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIEQIGRLIEK 248

Query: 391 KIAL 394
           ++ +
Sbjct: 249 RMDI 252


>gi|27381500|ref|NP_773029.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354668|dbj|BAC51654.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 218

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 18/236 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   FG+      L     T+      FV     G+ ++L      R    ++ + +  +
Sbjct: 1   MTPHFGLPEFGFLLRGLQWTVLLTLVAFVGGCTAGLAVALL-----RTCGHRSVEWITRI 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P L+ + + Y                       F+++ I  +   +AF+ 
Sbjct: 56  YIGIF--QGTPLLLQLFVVYY-----------GLALTGLKLDAFVAVAIGFTVNASAFLG 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + AVPRGQ EAA+ALGL +    R ++LPQA+R  +P      + L+K +SLA 
Sbjct: 103 EIWRGAIQAVPRGQTEAAMALGLHYSSRMRDIVLPQAIRISLPATIGYLVQLIKGTSLAA 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            VGF +L   G  + NQT Q + +  +   +Y  L   ++ + +R+ A++AL  ++
Sbjct: 163 IVGFIELARAGQIVSNQTFQPLLVFGVVGAMYFILCWPLSWWGSRMEARLALASQR 218



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L     +     G  V   R   ++ V WI R+Y+ +F+  P L+ +F +
Sbjct: 13  LLRGLQWTVLLTLVAFVGGCTAGLAVALLRTCGHRSVEWITRIYIGIFQGTPLLLQLFVV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +       D  + +  G  +N              A
Sbjct: 73  YYGLALTGLKLDAFVAVAIGFTVNASAFLGEIWRGAIQA 111


>gi|239821010|ref|YP_002948195.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805863|gb|ACS22929.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 233

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 9/225 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                   T+   A  ++ +  + +VL +      R    +  + +   Y+S      +P
Sbjct: 18  MLWHGLQETLKIAAGSWLLAMAMAVVLLVV-----RLTPNRLAERVVAGYVS--YHRNVP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TLV + L Y   F    L        S  + E +   +AL    AA+ +E +RSGL ++P
Sbjct: 71  TLVQLMLWYFGIFSL--LPDALQGWLSVHNAETILSIVALGLCQAAYFSEDMRSGLRSIP 128

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA ALG  +  + R V+LPQA+R+ +P L +  ++L KNSSLA+A+G A+L    
Sbjct: 129 PGQAEAARALGHGYIGSMRHVMLPQAIRNAVPALVNHSVSLFKNSSLAMAIGVAELTHAV 188

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I +Q+ +  E   +   +YL  S++I      L+ +  + + +
Sbjct: 189 KEIESQSFRTFEAYSMATVLYLVCSLLIMALGGWLSRRYRIAQAR 233



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++       +   +  G   T  +A    + A  +  ++   RL+ N+L   +   YV  
Sbjct: 6   LLAILLKPEFGAMLWHGLQETLKIAAGSWLLAMAMAVVLLVVRLTPNRLAERVVAGYVSY 65

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            RN+P LV +   Y  + S+LP      
Sbjct: 66  HRNVPTLVQLMLWYFGIFSLLPDALQGW 93


>gi|262043883|ref|ZP_06016971.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038737|gb|EEW39920.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 506

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +G F +   +        T   I   S+ +G+V+       ++    +  K    L
Sbjct: 1   MAFDWGYFFSLFSIGAFWQACVTVIVISTLSWGIGLVVGFLL-ACAKLSAPRWVKIPVEL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F    +P +VL+   Y L    PV      +        F++  ++++   AA++A
Sbjct: 60  YIWFF--RSVPLMVLLVFVYNLPQLFPVTQPLLGV-------PFIAGLVSMTVTEAAYMA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL++V +GQ EA  AL  +     RL+++PQA R  +P L ++Y+ ++K SS+  
Sbjct: 111 EIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V   +L+  G  +  Q    +E +L     Y+ +  +       L  ++ ++ K+
Sbjct: 171 VVSLPELLLTGQRLYAQNFLVMETLLAVAVYYVMVVTVFTWLFRALENRLDIQRKR 226



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A     V    ++        ++G L+   +LSA + V     +Y+  FR++P +V++ F
Sbjct: 16  AFWQACVTVIVISTLSWGIGLVVGFLLACAKLSAPRWVKIPVELYIWFFRSVPLMVLLVF 75

Query: 148 LYK 150
           +Y 
Sbjct: 76  VYN 78


>gi|239616532|ref|YP_002939854.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505363|gb|ACR78850.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
          Length = 206

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+  +S  LG++L+L      + +  +  K + ++Y   F    +P LV++ L +  
Sbjct: 1   MTLKLTFWSLGLGLILAL-PFSFGQVYGGRIAKGIIVVYERLF--RSIPLLVILFLIFY- 56

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F   +     F +  + L   +AA+ ++I R  + +V   QM AA +LG
Sbjct: 57  ----------GFPKINVRFSPFTACILGLGLRSAAYQSQIFRGAIQSVSETQMRAARSLG 106

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R V+LPQA+R  +P  T+++  +LK+SSLA A+G  +L+  GG II+   + +
Sbjct: 107 MSRLQGFRHVVLPQALRIALPGWTNEFTIVLKDSSLAYALGVTELLRQGGYIISTKYEPM 166

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I L    IYL +++ I   +  +  K+A+
Sbjct: 167 LIYLSVAVIYLVITLGINRGLGTVEKKLAI 196


>gi|134295205|ref|YP_001118940.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138362|gb|ABO54105.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 229

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLLGWDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GAAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|70732198|ref|YP_261954.1| ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68346497|gb|AAY94103.1| probable permease of ABC transporter PA1340 [Pseudomonas
           fluorescens Pf-5]
          Length = 223

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 7/230 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +      M    K+ V   V GI+L      L R  H K    L   Y+
Sbjct: 1   MEFDFSGIIPAIPGLWNGMLMTLKLMVMGVVGGIILGTLL-ALMRLSHNKLLSNLAGAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F      ++ L+ +    +   P + ++   G  T    F S  +A   + AA+  EI
Sbjct: 60  NYFR-----SIPLLLVITWFYLAVPFVLRW-ITGEDTPIGAFTSCIVAFMMFEAAYFCEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++P+GQM AA ALG+++ +  RL++LPQA R + P L  Q + L +++SL   V
Sbjct: 114 VRAGVQSIPKGQMGAAQALGMSYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D ++   +  +  G++ E ++I   +Y ++S   +L + RL  + A+
Sbjct: 174 GLVDFLNASRSSGDIIGRSNEFLIIAGLVYFTISFAASLLVKRLQKRFAV 223



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L   G++   I+GTL+   RLS NKL++ +   YV  FR+IP L+VI + 
Sbjct: 15  LWNGMLMTLKLMVMGVVGGIILGTLLALMRLSHNKLLSNLAGAYVNYFRSIPLLLVITWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 75  YLAVPFVLRWITGEDTPIGAFTSCIVAFMMFEAAYFCEI 113


>gi|89068767|ref|ZP_01156153.1| putative amino acid uptake ABC transporter permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89045730|gb|EAR51792.1| putative amino acid uptake ABC transporter permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 537

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 1/180 (0%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL   S FLI  L  + ++ +   +      + + +  GG    P  +   IA++  
Sbjct: 358 RRHPLSVASEFLIDTLRGIPMLVIILYIGLPLAGVVK-SSTGGFIDPPNMLRGIIAMAIA 416

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AEI R+G+ AVP GQ+EAA +LGL+     R V+LPQA R +IPP+ ++++ +LK
Sbjct: 417 YSAYLAEIFRAGINAVPTGQIEAARSLGLSRWSTARHVILPQAFRIVIPPMGNEFIAILK 476

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++SL   +   DL        + +            +Y+ L+++ A  + R+  +     
Sbjct: 477 DTSLLSILSIRDLTQRMREFQSASFLPFAPYNTAAIVYVLLTLVAASLIARVEHRFRQHR 536


>gi|222081149|ref|YP_002540512.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725828|gb|ACM28917.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 219

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
              +F   ++     + + + + G +L  FA  L+R    K  +     YI   +I G+P
Sbjct: 9   NEFTFLLQSLQWTVVLTIIALIGGGLLG-FAVALARTSSIKAVRIAAGTYIQ--VIQGIP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+++ L Y                     P  ++   +++ Y + ++AEI R  + AVP
Sbjct: 66  VLMILFLSYY-----------GLSLAGFELPPLIAAGASMTIYASGYLAEIWRGCIQAVP 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           + Q EA+ +L +T  +  R V+LPQA+R  +PP     + ++KN+S+   +GF +L   G
Sbjct: 115 KQQWEASESLAMTRLQQYRYVILPQAVRISLPPTVGFAVQVVKNTSITSIIGFVELARAG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I N T Q   + +    +Y  +   ++     L  ++     +
Sbjct: 175 QLINNATFQPFRVFIAVAALYFVVCYPLSQLSRWLERRLHAGSNR 219



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 35/102 (34%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T +L     T  L    +I   ++G  V   R S+ K V      Y++V + IP L+++
Sbjct: 11  FTFLLQSLQWTVVLTIIALIGGGLLGFAVALARTSSIKAVRIAAGTYIQVIQGIPVLMIL 70

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F  Y  +          I     M +   G           A
Sbjct: 71  FLSYYGLSLAGFELPPLIAAGASMTIYASGYLAEIWRGCIQA 112


>gi|107026980|ref|YP_624491.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116691823|ref|YP_837356.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105896354|gb|ABF79518.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116649823|gb|ABK10463.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 229

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    ++L L     ++    +  K++   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVETVKLAVLSLAASLILGLAGAA-AKLSANRVLKSVGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F +  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNNVTDLLGWDQIDIDPFAAGVVTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 188 TLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 226


>gi|299782729|gb|ADJ40727.1| Glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum CECT 5716]
          Length = 484

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + + G++L +      + F   +        +  ++  G+P +V   L + +
Sbjct: 293 LTVVGVALAILFGVILGVMGISDRKIFSSISS-------VIIYIFRGMPMIV---LAFFI 342

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +   P +            P F +  + L     A++  IV+ G  AV RGQ EAA +LG
Sbjct: 343 YIGMPSVIG-------HKIPLFTAGILTLMLDEGAYVGAIVKGGFQAVDRGQWEAARSLG 395

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + K    V++PQ ++ ++P L +Q +  LK++S+  A+G  +L   G  II +  +  
Sbjct: 396 LPYYKTLVKVIMPQGIKIMVPSLVNQLIITLKDTSILSAIGVMELTQTGTVIIARNMEGF 455

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +I LI   IY+ +  ++    N +  K+A
Sbjct: 456 KIWLIIGVIYIIIITLLTWLSNYVQRKMA 484



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 39/75 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   A+L G   T  L   G+  A + G ++G   +S  K+ + I  V + +FR +P +V
Sbjct: 278 SNKDALLSGLGETLLLTVVGVALAILFGVILGVMGISDRKIFSSISSVIIYIFRGMPMIV 337

Query: 144 VIFFLYKSVLSVLPI 158
           + FF+Y  + SV+  
Sbjct: 338 LAFFIYIGMPSVIGH 352


>gi|262275665|ref|ZP_06053474.1| amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Grimontia hollisae CIP 101886]
 gi|262219473|gb|EEY70789.1| amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Grimontia hollisae CIP 101886]
          Length = 222

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 97/232 (41%), Gaps = 14/232 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  +   +    L                 + + +VL L    L R       + +  L 
Sbjct: 1   MFDWQWTVVWEVLPRLIAATGNTLIAAGAGYAVAMVLGLVFMLLQRTPSAFLNRFVRELV 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                I   P ++ I   + +    P +G F           + +  IA+  + AA+++E
Sbjct: 61  E---FIRSTPLILQIFFVFYVG---PQIGLF--------LDPWAAGLIAIGLHYAAYLSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R GL +V +GQ EAA AL ++  K    ++LPQA+   +  + +  + + K++ +   
Sbjct: 107 VYRGGLESVDKGQWEAAKALNMSTFKTYSRIVLPQALPPSLAGMGNYLVGIFKDTPMLSV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +G A+L+     I +++ + +E   +   I+L +S+  +L M     K+  K
Sbjct: 167 IGVAELMHTANAIGSESYRFLEPFTLVGVIFLVISLPTSLLMRVTERKVRQK 218


>gi|188583629|ref|YP_001927074.1| polar amino acid ABC transporter inner hypothetical protein
           [Methylobacterium populi BJ001]
 gi|179347127|gb|ACB82539.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium populi BJ001]
          Length = 230

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 2/216 (0%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALK 241
               A+  VF+  L  + +     L           +P L + +   +  +  L L+ + 
Sbjct: 15  PYLFAQGMVFTLTLTALAASGGLVLGTGLALLRLSGVPGLTHAAKLYVELMRALPLVLVI 74

Query: 242 YQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           +  +F  P LG +     + +    F S  I  + + AA+ +EIVR+G+ ++P GQ  AA
Sbjct: 75  FWFYFLVPYLGAWAIGSDTPIQVGAFASALITFTLFEAAYFSEIVRAGIQSIPEGQGAAA 134

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG++  +A RLV+LPQAMR+++P L +Q + L +++SL   +   D +     +  + 
Sbjct: 135 RALGMSPAQAMRLVVLPQAMRNMLPLLLTQTIVLFQDTSLVYVLSLTDFLGAASKVAQRD 194

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G+ +E+ L    +Y ++    +L + RL A+ A+  
Sbjct: 195 GRLVEMYLFAALVYFAICFAASLLVRRLQARTAIVR 230



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 31/71 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G V T  L         ++GT +   RLS    +    ++YVE+ R +P ++VIF+ 
Sbjct: 18  FAQGMVFTLTLTALAASGGLVLGTGLALLRLSGVPGLTHAAKLYVELMRALPLVLVIFWF 77

Query: 149 YKSVLSVLPIP 159
           Y  V  +    
Sbjct: 78  YFLVPYLGAWA 88


>gi|160894911|ref|ZP_02075685.1| hypothetical protein CLOL250_02461 [Clostridium sp. L2-50]
 gi|156863342|gb|EDO56773.1| hypothetical protein CLOL250_02461 [Clostridium sp. L2-50]
          Length = 243

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 94/185 (50%), Gaps = 12/185 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +   A+  +Y+  F   G P +V + L Y +            +GG           +  
Sbjct: 70  RVLDAICSVYVGFF--RGTPMVVQLLLFYYV--------LLPIVGG--HMSGVQVSMLVF 117

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              + A+I+EI+RSG+++V  GQME   A+GL+     R +++PQA+++I+P L +++++
Sbjct: 118 GLNSGAYISEIMRSGILSVDPGQMEGGRAMGLSFATTMRKIVIPQAVKNILPTLGNEFIS 177

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K +S+   VG  DL      I + + + +   L+   IY+ + ++I+L +  +   + 
Sbjct: 178 LIKETSVVSFVGATDLYVAFNYIGSNSYEFMIPYLVMALIYIVMVLLISLGIKLMERSLR 237

Query: 394 LKEKK 398
             +++
Sbjct: 238 KSDRR 242


>gi|24114552|ref|NP_709062.1| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|24053745|gb|AAN44769.1| putative transport system permease protein [Shigella flexneri 2a
           str. 301]
          Length = 163

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 65/137 (47%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W   N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 22  NPTVRAWLFQILAVVAVVGIVGWLFQNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 81

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNI 
Sbjct: 82  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIA 141

Query: 141 PLVVIFFLYKSVLSVLP 157
            L+++           P
Sbjct: 142 NLLLVLCRVAQFARTTP 158


>gi|312797032|ref|YP_004029954.1| Histidine transport system permease protein hisQ [Burkholderia
           rhizoxinica HKI 454]
 gi|312168807|emb|CBW75810.1| Histidine transport system permease protein hisQ [Burkholderia
           rhizoxinica HKI 454]
          Length = 229

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 5/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ + S  +  ++ L     +R    +  + +  +Y  T LI G+P LVL+ L + 
Sbjct: 15  WQTIKLSLLSLAVAFMIGLLGAA-ARLSRSRMPRMVGTVY--TTLIRGVPDLVLMLLVFF 71

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +      L     I    + P F +  + L     A+  E  R   ++VPRGQMEAA A
Sbjct: 72  SMQIWLNHLTDLMQIEQIDIDP-FTAGVLTLGFIYGAYFTETFRGAFLSVPRGQMEAAAA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G+T  +A   V+ PQ MR  +P + + +  L+K+++L   +G AD+V         T +
Sbjct: 131 YGMTSWQAFSRVMFPQMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKASQDAGKGTMR 190

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                ++   IYL+++ +  + +  L  + +   ++
Sbjct: 191 FFFFTVVAGAIYLAITTLSNVVLLYLERRYSTGVRR 226



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  G   T  L+   +  A +IG L  A RLS +++   +  VY  + R +P LV+
Sbjct: 6   YGPVIAAGTWQTIKLSLLSLAVAFMIGLLGAAARLSRSRMPRMVGTVYTTLIRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  ++ S+
Sbjct: 66  MLLVFFSM 73


>gi|238019791|ref|ZP_04600217.1| hypothetical protein VEIDISOL_01666 [Veillonella dispar ATCC 17748]
 gi|282849422|ref|ZP_06258807.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|294794721|ref|ZP_06759856.1| probable amino-acid permease protein YxeN [Veillonella sp. 3_1_44]
 gi|237863315|gb|EEP64605.1| hypothetical protein VEIDISOL_01666 [Veillonella dispar ATCC 17748]
 gi|282581126|gb|EFB86524.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|294454083|gb|EFG22457.1| probable amino-acid permease protein YxeN [Veillonella sp. 3_1_44]
          Length = 238

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 93/227 (40%), Gaps = 1/227 (0%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                       +     I   S  LG +L L +  L ++        L  LY+      
Sbjct: 9   YIYGTFFAVIPYVKVTLMITFLSVGLGTILGLLSCVLQQN-KVPVLSQLSYLYVLLCRSI 67

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L+ +           +  Q          P      + L+ +T A+++EI R+ L 
Sbjct: 68  PNMVLLYLVYYGLPILFLALEDQTGVHVPFEKVPATFVAVVGLTLHTGAYLSEIFRAALQ 127

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQMEAA A+G+T  +A R ++LPQA    +P  T+Q+LN +K++S+   +   +L 
Sbjct: 128 SVPKGQMEAAQAIGMTWFQAFRRIVLPQATVFALPLFTNQFLNTMKSTSIVFVITVIELF 187

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                   +  Q  E  ++   ++  + I+     +RL    +  ++
Sbjct: 188 GAAKLYTEENSQYFEAYIVVAGLFWVMGIVFEFIFHRLEIYASKYKR 234


>gi|218888236|ref|YP_002437557.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759190|gb|ACL10089.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 233

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 5/229 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                + + L+   L +    +    +I   S VL + L      + R    +       
Sbjct: 2   QYNFDWKLVLSGEYLQWIIDGVVVTCQISALSLVLAMALGTLI-AVMRLSAVRPLVWFSA 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +   F     P LV I   Y       VL           + EF +  I+L+ YTAAFI
Sbjct: 61  GFTEFF--RNTPLLVQIFFWYFGS--DAVLPTAVNQWLYKQNFEFAAGVISLAVYTAAFI 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +RSG+ ++PR Q+EA+ A GLT  +A R V+LPQA R I+PPL SQ LNL KNSSL 
Sbjct: 117 AEEIRSGIFSIPRTQLEASRACGLTFLQAMRYVVLPQAFRIIVPPLISQALNLFKNSSLC 176

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +G  +L  +   I + T    E   +   IYL++S++++  + + N 
Sbjct: 177 MTIGVMELTYMARQIESYTFHGFEAFTVSTLIYLTISLLVSFSITQYNK 225



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 41/85 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   I+ G V T  ++   ++ A  +GTL+   RLSA + + W    + E FRN P 
Sbjct: 12  SGEYLQWIIDGVVVTCQISALSLVLAMALGTLIAVMRLSAVRPLVWFSAGFTEFFRNTPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV IFF Y    +VLP   +  +  
Sbjct: 72  LVQIFFWYFGSDAVLPTAVNQWLYK 96


>gi|134103707|ref|YP_001109368.1| putative ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291004758|ref|ZP_06562731.1| putative ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133916330|emb|CAM06443.1| putative ABC transporter permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 264

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 69/211 (32%), Positives = 104/211 (49%), Gaps = 22/211 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              F F   LGIVL+L      +       + +   YI  F       LV IAL     F
Sbjct: 64  VLGFGFGLALGIVLALM-----KLSPVGPYRWIATAYIELFRGLPA-LLVFIALG----F 113

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+  Q  F   STV        +AL    AA++AE +R+G+ AVPRGQ+EAA +LG++
Sbjct: 114 GVPIAFQMRFDIYSTVM-------LALGLVGAAYMAETIRAGVQAVPRGQVEAARSLGMS 166

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
             +    V++PQA R I+PPLT++ + L K+SSL   +G A    +L   G   +N+   
Sbjct: 167 PTRTMLTVVMPQAFRIILPPLTNELILLTKDSSLVYLLGLASNEYELAKFGRNALNE-YA 225

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++  +L+    YL ++I ++   N L  K  
Sbjct: 226 SLTPLLVAGLCYLIITIPLSRVSNVLERKYG 256



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 28/77 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I    VNT      G      +G ++   +LS      WI   Y+E+FR +P L+V   
Sbjct: 51  VITTALVNTVVYTVLGFGFGLALGIVLALMKLSPVGPYRWIATAYIELFRGLPALLVFIA 110

Query: 148 LYKSVLSVLPIPDHSIV 164
           L   V     +      
Sbjct: 111 LGFGVPIAFQMRFDIYS 127


>gi|121594464|ref|YP_986360.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|120606544|gb|ABM42284.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidovorax sp. JS42]
          Length = 230

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               F              S VLG+VL  F+  + R         +  +Y+S F   G P
Sbjct: 20  MAWPFLLQGAMYTVLFAAVSMVLGLVLG-FSVAVVRVTKVPVVSQIAAVYVSAF--RGTP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y                         +  +AL+   AA+++E +R  ++ + 
Sbjct: 77  LLVQIFVLYY-----------GLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGID 125

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA +++GLT  +    ++ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 126 KGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLAT 185

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +I +T Q + + L    IY  LS +       L  ++    ++
Sbjct: 186 KEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR 230



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 37/87 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G + T   A   M+   ++G  V   R++   +V+ I  VYV  FR  P LV I
Sbjct: 22  WPFLLQGAMYTVLFAAVSMVLGLVLGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQI 81

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           F LY  + SV             + LN
Sbjct: 82  FVLYYGLPSVGIEFTPVTAGILALTLN 108


>gi|311107288|ref|YP_003980141.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Achromobacter
           xylosoxidans A8]
 gi|310761977|gb|ADP17426.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Achromobacter xylosoxidans A8]
          Length = 217

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   + VL + L+L A  + R    +  + +  +Y+  F   G   LV +   +  
Sbjct: 21  VTLEIMAGAVVLAVPLALAAG-IGRLSSLRPLRWIAAVYVEVF--RGTSALVQL---FWF 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+             P  +   + L+    A+ AE+VR  + AVP GQ EA +AL 
Sbjct: 75  YFVLPLF--------GVQLPAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALN 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R +++PQA+ +++PP  +  + LLKN++L   +   DL   G  + ++T +  
Sbjct: 127 LTRGQIMRRIVVPQAVPAMLPPAGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTT 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           EI  + + +Y +++++I   +  L  K+ ++
Sbjct: 187 EIFTLMLLMYFAVALLITAGVRLLERKVRVR 217



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ A  +    G GRLS+ + + WI  VYVEVFR    LV +F+ 
Sbjct: 15  LLQGLAVTLEIMAGAVVLAVPLALAAGIGRLSSLRPLRWIAAVYVEVFRGTSALVQLFWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +          +V    + LN
Sbjct: 75  YFVLPLFGVQLPAMLVGIVVLALN 98


>gi|228478438|ref|ZP_04063042.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|312862640|ref|ZP_07722880.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|312862691|ref|ZP_07722931.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|228249796|gb|EEK09083.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|311101500|gb|EFQ59703.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|311101551|gb|EFQ59754.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
          Length = 232

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 11/215 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         I + + ++ ++L L    +S   H K  + +  +Y+  F     P 
Sbjct: 22  NFGQFAKGFFYTLGISIGALIVALLLGLIFGAMS-STHNKVLRGISRVYVEIF--QNTPL 78

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV   + +                G  + P  ++  + +  YT A+I+EI+R+G+ AVP+
Sbjct: 79  LVQFVVVFYGISIL--------TDGHVMIPISLTAILCVGVYTGAYISEIIRTGIEAVPK 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++ G T+    R+++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++    
Sbjct: 131 GQTEAALSQGFTYADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAK 190

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                T   +       F+Y  +   +A +  R  
Sbjct: 191 AWAYDTTNYVPAFAGAAFLYFIMCFPLATWARRKE 225



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF  T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV    +
Sbjct: 26  FAKGFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVV 85

Query: 149 YKSV 152
           +  +
Sbjct: 86  FYGI 89


>gi|170732503|ref|YP_001764450.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169815745|gb|ACA90328.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 229

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLVGWNQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GSAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|152978298|ref|YP_001343927.1| arginine transporter permease subunit ArtQ [Actinobacillus
           succinogenes 130Z]
 gi|150840021|gb|ABR73992.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 223

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L            + V S ++G++LS+F   L         K +    ++  L+ 
Sbjct: 1   MFFDFLPLMYSAALITLALAVSSLIVGLILSMFFVMLETSKFACIRKPVS---VAITLLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +          G       F     ALS   AA+ ++ +R  + 
Sbjct: 58  GLPEIIVVLLIYFGSTEVVEK----LTGEYVEFSAFSCGVAALSLIFAAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQ E+  ALGL+       ++LPQ  R  +P L++Q+L LLK+++L   +G  D++
Sbjct: 114 AISLGQWESGAALGLSRGYTFMHIILPQMWRHALPGLSNQWLVLLKDTALVSLIGVNDIM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I   T Q          IYL ++++  +F+ RL  +    E+
Sbjct: 174 RQTDLINTNTHQPFTWYGFAALIYLVITLISQVFIRRLEQRFTRFER 220


>gi|283788087|ref|YP_003367952.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
 gi|282951541|emb|CBG91240.1| ABC transporter, permease protein [Citrobacter rodentium ICC168]
          Length = 368

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 131/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ +R G +   G+ P+        A+++G V+         I       +   GR  
Sbjct: 78  WVFIQQRFG-QFMYGLYPHDQRWRINLALVIGLVS---------IIPMFWKAIPRRGR-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I P++    LY     +  +                     T
Sbjct: 126 -----------YIAVWAVIYPIIAWGLLYGGSAGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L      R  H    + L + +I  +    L T++ ++ 
Sbjct: 162 LTLIIAAVGIAGALPLGILLAL-----GRRSHMPIVRVLSVTFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGTSIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y       + +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALVYWIFCFSTSRYSQHLEKRFNTGR 365


>gi|121607782|ref|YP_995589.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552422|gb|ABM56571.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 221

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 13/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + + + G+ L L A  + R    +  +   + YI  F     P LV +     +
Sbjct: 23  VTMLFTLSTVLAGVALGLVAGVI-RTHRSRWLRLPAIAYIEAF--RCTPLLVQLV---WI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  PVL               M+ ++ L+ Y  AF AE+ R G+ AV +GQ EA  ALG
Sbjct: 77  YYALPVLSGVAL-------SPIMACFLTLTLYAGAFYAEVFRGGIEAVGKGQWEAGGALG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + H +  R ++LPQA+R +IP   +Q +  LKN+SL   +  ADL+  G  I     + +
Sbjct: 130 MRHAQTLRSIILPQAVRIMIPSFINQTVMQLKNTSLVSTIAVADLLYQGAVITAAIYRPL 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E+  +   IY ++   + +   R+  ++  + 
Sbjct: 190 EVYTVVAVIYFAVLFPLTVAAQRVETRLGTRR 221



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I  G   T     S ++    +G + G  R   ++ +      Y+E FR  P LV
Sbjct: 12  PYRALIARGLGVTMLFTLSTVLAGVALGLVAGVIRTHRSRWLRLPAIAYIEAFRCTPLLV 71

Query: 144 VIFFLYKSVL 153
            + ++Y ++ 
Sbjct: 72  QLVWIYYALP 81


>gi|89073558|ref|ZP_01160080.1| ABC-type arginine transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89050585|gb|EAR56071.1| ABC-type arginine transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 219

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 7/212 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   S  +G+VL++           +  +   + + +T L+  L  L  + +   +
Sbjct: 1   MTVQLAFTSLAVGLVLAMLFA------GGEMSRFRFVAWPTTALVTVLRGLPELLIVLFI 54

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F    +  F   G       F+S  IALS   A++ A+ +R  + AVP+GQ EAA ALG
Sbjct: 55  FFGSGQV-LFYITGDYIEISPFLSGVIALSLIFASYAAQTIRGAIKAVPKGQREAASALG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    +++PQA+R  +P LT+Q+L LLK+++L   +G  DL+         T ++ 
Sbjct: 114 ISKSRTFVAIIIPQAIRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLSSAATHESF 173

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                   +YL ++++    + R++AK + +E
Sbjct: 174 TWYATAAAVYLVITLITQQIIKRIDAKYSAQE 205


>gi|153010088|ref|YP_001371302.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561976|gb|ABS15473.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 548

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 22/273 (8%)

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            V +  FR  PP  +     K+ +S + +P  S+     +      L+    +       
Sbjct: 294 EVPLRTFRG-PPEALAALGKKADVSAVLLPAASVPANVPVLWQTEALNDRDKSAG--IAF 350

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHF 246
            V +  LG++ +               +  PL   S F+   I G+P LV++     L+ 
Sbjct: 351 VVLAIALGLLTACGH----------IHRRHPLSIGSEFIVDTIRGIPMLVIV-----LYV 395

Query: 247 DKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P+ G   +   G    P       A++   +A++AEI RSG+ A+PRGQ+EAA +LGL
Sbjct: 396 GLPLSGALKDATQGVIDPPNMARGVAAMALAYSAYLAEIFRSGINAIPRGQIEAARSLGL 455

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RLV+LPQA R IIPPL ++ + +LK++SL   +   D+        + +     
Sbjct: 456 NGWQTARLVILPQAFRIIIPPLGNELIAILKDTSLLSILSIRDITQRMREFQSASFLPFA 515

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                   Y+ L++  A  ++ +  K    + +
Sbjct: 516 PYNSAAIFYILLTLAAASLVSTIERKYDANKHR 548


>gi|149191456|ref|ZP_01869706.1| arginine transporter permease subunit ArtQ [Vibrio shilonii AK1]
 gi|148834725|gb|EDL51712.1| arginine transporter permease subunit ArtQ [Vibrio shilonii AK1]
          Length = 230

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 7/213 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G+VL++         H+    + P   I T +      LV++ + + 
Sbjct: 15  WVTIQLAFVSLLVGLVLAIIFAGGEMSRHKII--SWPTTAIVTIIRGLPELLVVLFIFFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F++  IALS   A++ A+ +R  L AVP GQ EA  AL
Sbjct: 73  -----STQVLFLITGDFIEVSPFLAGVIALSLIFASYAAQTIRGALKAVPSGQREAGSAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +    ++LPQA++  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GLSRARVFFRIVLPQAVKHALPGLTNQWLVLLKDTALVSLIGVTDLMKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                    IYL ++++    +  L+ K + KE
Sbjct: 188 FTWYATAAAIYLIITLITQKAVKVLDKKFSSKE 220



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 36/71 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+ +++     T  LAF  ++   ++  +   G +S +K+++W     V + R +P L+V
Sbjct: 6   YSASLVQASWVTIQLAFVSLLVGLVLAIIFAGGEMSRHKIISWPTTAIVTIIRGLPELLV 65

Query: 145 IFFLYKSVLSV 155
           + F++     V
Sbjct: 66  VLFIFFGSTQV 76


>gi|300718192|ref|YP_003742995.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299064028|emb|CAX61148.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 221

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 18/215 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + S + G  L+L   R +  +        PLL   + +  GLP LV+I L Y 
Sbjct: 22  QLCVVAAIASLIAGSTLALLLMRAAPFWQ-------PLLRFYSSVTLGLPLLVVIYLLYF 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  +  +      +G            +AL+ Y A +IA+++R+GL A+PRGQ EA+  L
Sbjct: 75  VLPEYDITLSSPVVG-----------VVALTLYYAPYIAQVLRAGLEALPRGQWEASRVL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    V+LPQ +  ++ PL    + L+K+S+L   V   + +      I++T   
Sbjct: 124 GLGRFRTFSDVILPQTLPQMLSPLVGLLIGLIKDSALLSVVSVPEFMYAAKQAISETYAP 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +EI L    IY  L  +I     R   ++     +
Sbjct: 184 LEIYLAVALIYWLLCSVIDHLARRAERRMTRYLAR 218


>gi|289424103|ref|ZP_06425889.1| amino acid ABC transporter, permease protein [Peptostreptococcus
           anaerobius 653-L]
 gi|289155528|gb|EFD04207.1| amino acid ABC transporter, permease protein [Peptostreptococcus
           anaerobius 653-L]
          Length = 205

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 13/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++FV + V  I L L      R    K  +++   YI  +++ G P L+ +     L++
Sbjct: 9   LELFVLTTVFSIPLGLLV-AQVRISKNKLARSVTSFYI--WIMRGSPLLLQMMF---LYY 62

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L +      + V  +     IA +   AA+ AEI RSGL ++ RGQ EAA  LG  
Sbjct: 63  GLPLLNE------NLVFDKMPIAVIAFTINYAAYYAEIFRSGLESIDRGQYEAAKVLGFD 116

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +++PQ ++ ++PP++++++NL+K++SL   +G  DL  +     N+    +  
Sbjct: 117 KWTMNRRIIIPQVIKRVLPPVSNEFINLVKDTSLVSVLGLNDLFRIATAASNREASLMP- 175

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            L    IYL L+ +I      L  K +
Sbjct: 176 FLYAAIIYLVLTALITQLFASLEKKYS 202



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G      L     + +  +G LV   R+S NKL   +   Y+ + R  P L+ + FL
Sbjct: 1   MIEGLKIVLELFVLTTVFSIPLGLLVAQVRISKNKLARSVTSFYIWIMRGSPLLLQMMFL 60

Query: 149 YKSVLSVL 156
           Y  +  + 
Sbjct: 61  YYGLPLLN 68


>gi|209551407|ref|YP_002283324.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537163|gb|ACI57098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 226

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 106/216 (49%), Gaps = 14/216 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G++L L  T ++R F      A+   Y+  ++I G P LV + 
Sbjct: 17  WAGLIFTIPLTLLSFAFGLILGLI-TAIARLFGPGPVAAIARFYV--WVIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  VIFY-----------GLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWRQAMSRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T + + + +    +YL LS +++    RL  + A  
Sbjct: 183 TYEPLILYIEAALLYLVLSSVLSQLQVRLERRFARY 218



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L         I+G +    RL     VA I R YV V R  P LV +F +
Sbjct: 16  LWAGLIFTIPLTLLSFAFGLILGLITAIARLFGPGPVAAIARFYVWVIRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 76  FYGLPSIGILLDAFPAALIGFTLN 99


>gi|293609590|ref|ZP_06691892.1| polar amino acid ABC transporter [Acinetobacter sp. SH024]
 gi|292828042|gb|EFF86405.1| polar amino acid ABC transporter [Acinetobacter sp. SH024]
          Length = 229

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 9/234 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        LS   +T+       + S ++G++ +      S+    K  + +   Y  
Sbjct: 1   MFFSGFGPLLLSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSSIKILRYIATAY-- 53

Query: 226 TFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI  +P LV++ L +  L      + +   +    ++P F++  I L+    A+  E 
Sbjct: 54  TTLIRSVPDLVIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R    +VP+GQ+EAA+A G++  +    VL PQ MR  +P + + +  L+K ++L   +
Sbjct: 113 FRGAFQSVPKGQIEAAMAYGMSPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSII 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D+V +       T       ++   IYL+++ +  L +  L  + +   +K
Sbjct: 173 GLTDIVKITQDAGRSTMHLFFFSIVAAAIYLAITTVSNLILMWLERRYSAGVRK 226


>gi|225854141|ref|YP_002735653.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|225723247|gb|ACO19100.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
          Length = 225

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQ  R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|229816603|ref|ZP_04446901.1| hypothetical protein COLINT_03660 [Collinsella intestinalis DSM
           13280]
 gi|229807809|gb|EEP43613.1| hypothetical protein COLINT_03660 [Collinsella intestinalis DSM
           13280]
          Length = 261

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 5/186 (2%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +  + +  +Y+  +    LP  V +   Y        L              F    +
Sbjct: 53  RSRILRGISRVYVEFYQNTPLP--VQVLFMYMA--GPQFLQVMTGAAQPVRIAPFALGAL 108

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y AA++AE++R+G+ AVPRGQMEAA + G +  +    ++LPQ  + I+PPL +Q 
Sbjct: 109 GVGLYHAAYVAEVIRTGIEAVPRGQMEAAQSQGFSRLQTYAYIVLPQTFKIILPPLCNQA 168

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL+KN+S+   V   DL+      ++  G  ++  ++   +Y  +   IA+    L  +
Sbjct: 169 LNLVKNTSVLALVAGGDLMYRSDNFVSLYG-FLQGYIVCCLMYFIICFPIAMLGQWLERR 227

Query: 392 IALKEK 397
              + +
Sbjct: 228 SKARPR 233


>gi|206895967|ref|YP_002246908.1| glutamine ABC transporter, permease protein [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738584|gb|ACI17662.1| glutamine ABC transporter, permease protein [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 216

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 18/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            S    T+       +   V G++L+L      +       K + + YI   LI G P L
Sbjct: 16  WSGFLTTLGLTLSSLLVGLVFGLILALM-----KISTNWILKGISIAYIE--LIRGTPAL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I L Y           F             +  +AL   +AA+  EI R+G+ ++ RG
Sbjct: 69  MQIMLVY-----------FGLPALGLNIDRLTAAVVALGLNSAAYSGEIFRAGIESIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA A+G+T   A RL++LPQA R +IPPL ++++ LLK++SL   +G ADL+     
Sbjct: 118 QMEAARAIGMTGSMAMRLIVLPQAFRVVIPPLVNEFVALLKDTSLVSVIGVADLMLRSRN 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +I+ T      +L    +YL  +I  +     L  +  
Sbjct: 178 MISYTANVFTPLLGASILYLLATIPGSQLSAYLERRFK 215



 Score = 36.8 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 39/89 (43%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +  GF+ T  L  S ++   + G ++   ++S N ++  I   Y+E+ R  P L+
Sbjct: 10  TIFPILWSGFLTTLGLTLSSLLVGLVFGLILALMKISTNWILKGISIAYIELIRGTPALM 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            I  +Y  + ++    D        + LN
Sbjct: 70  QIMLVYFGLPALGLNIDRLTAAVVALGLN 98


>gi|327478629|gb|AEA81939.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 219

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 11/188 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 + L ++Y+  F   G   LV +   + L+F  P+         +     F    
Sbjct: 39  SPLAPLRWLAVIYVEVF--RGSSLLVQL---FWLYFVLPLPP------FNVEMSAFAVAV 87

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+ AE++R  + +V RGQ EA  AL +T     R ++LPQA+ + IPP T+ 
Sbjct: 88  VGLGLNIGAYGAEVLRGAIRSVHRGQHEACHALNMTPLTRMRRIILPQALLAAIPPGTNL 147

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN+SL   +  +DL      +   T   +EI  + + IY  L+  I   M RL  
Sbjct: 148 LIELLKNTSLVSLITLSDLAFRARQLDQATLMTLEIFGLALVIYFVLAQTINFAMRRLEQ 207

Query: 391 KIALKEKK 398
           ++A    +
Sbjct: 208 RLARGRMR 215



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 30/70 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +   G + A     +    RLS    + W+  +YVEVFR    LV +F+L
Sbjct: 8   LLQGTWVTVKVTAFGSLLAIACALIAALARLSPLAPLRWLAVIYVEVFRGSSLLVQLFWL 67

Query: 149 YKSVLSVLPI 158
           Y  +      
Sbjct: 68  YFVLPLPPFN 77


>gi|239833765|ref|ZP_04682093.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Ochrobactrum intermedium LMG 3301]
 gi|239821828|gb|EEQ93397.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Ochrobactrum intermedium LMG 3301]
          Length = 242

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 14/229 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                    L          A + + S  +G +L+  A  ++R         + ++YI  
Sbjct: 21  DDYMHWTEYLPALFKGAQITAILALSSMAIGTILAFSAG-IARFAGGPILSTIAVIYIEI 79

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G   LV +   + L++  P++                +  + L     A+ AE+VR
Sbjct: 80  F--RGTSLLVQL---FWLYYALPLI--------GISFDPVTTGIMGLGLNIGAYGAEVVR 126

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L AVP  Q EAA AL  +       V+LPQA+  ++P   +  ++ LK+++LA  +  
Sbjct: 127 GALQAVPEAQHEAARALNFSKGHTLFHVILPQAVVEMMPAFGNLAIHNLKDTALASLIAI 186

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +DL      + N T  ++ I  + +  Y +++++++  +  L  ++  +
Sbjct: 187 SDLTFQAQRLRNLTLDSVTIYSLTLLGYFAMALVLSAAIRWLERRLRRQ 235



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 48/123 (39%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
              AG    Q    Y   + Y  A+  G   T  LA S M   TI+    G  R +   +
Sbjct: 9   HGSAGIVSSQSGDDYMHWTEYLPALFKGAQITAILALSSMAIGTILAFSAGIARFAGGPI 68

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           ++ I  +Y+E+FR    LV +F+LY ++  +    D       G+ LN        +   
Sbjct: 69  LSTIAVIYIEIFRGTSLLVQLFWLYYALPLIGISFDPVTTGIMGLGLNIGAYGAEVVRGA 128

Query: 185 TNA 187
             A
Sbjct: 129 LQA 131


>gi|15618116|ref|NP_224401.1| amino acid ABC transporter ATPase [Chlamydophila pneumoniae CWL029]
 gi|16752848|ref|NP_445118.1| amino acid ABC transporter, permease protein [Chlamydophila
           pneumoniae AR39]
 gi|33241530|ref|NP_876471.1| ABC amino acid transporter permease [Chlamydophila pneumoniae
           TW-183]
 gi|4376462|gb|AAD18345.1| ABC Amino Acid Transporter Permease [Chlamydophila pneumoniae
           CWL029]
 gi|7189487|gb|AAF38393.1| amino acid ABC transporter, permease protein [Chlamydophila
           pneumoniae AR39]
 gi|33236038|gb|AAP98128.1| ABC amino acid transporter permease [Chlamydophila pneumoniae
           TW-183]
          Length = 217

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 15/227 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + +    L     T+  +    +   +LG+++       S +F  K  K L   Y+
Sbjct: 1   MDHWLAIARLLLRGCGYTLCVSGIGILCGSILGLLIGTVT---SLYFPSKLTKLLANSYV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P  + I + Y   F  P +               ++  IALS  +AA++AE 
Sbjct: 58  T--VIRGTPLFIQILIIY---FGLPEVLPIE-------PTPLVAGIIALSMNSAAYLAEN 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ ++  GQ E+A+ LG    +    ++ PQ  ++I+P LT+++++L+K SS+ + V
Sbjct: 106 IRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNEFVSLIKESSILMVV 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  +L  V   I+++    +E+ LI   +Y  ++   +        +
Sbjct: 166 GVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTTSFSCISRLSEKR 212



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGA--GRLSANKLVAWICRVYVEVFRNIPPL 142
            A  +L G   T  ++  G++  +I+G L+G        +KL   +   YV V R  P  
Sbjct: 7   IARLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLF 66

Query: 143 VVIFFLYKSVLSVLP 157
           + I  +Y  +  VLP
Sbjct: 67  IQILIIYFGLPEVLP 81


>gi|322517752|ref|ZP_08070604.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
 gi|322123596|gb|EFX95214.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 232

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 11/215 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         I + + ++ ++L L    +S   H K  + +  +Y+  F     P 
Sbjct: 22  NFGQFAKGFFYTLGISIGALIVALLLGLIFGAMS-STHNKVLRGISRIYVEIF--QNTPL 78

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV   + +                G  + P  ++  + +  YT A+I+EI+R+G+ AVP+
Sbjct: 79  LVQFVVVFYGISIL--------TDGHVMIPISLTAILCVGVYTGAYISEIIRTGIEAVPK 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++ G T+    R+++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++    
Sbjct: 131 GQTEAALSQGFTYADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAK 190

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                T   +       F+Y  +   +A +  R  
Sbjct: 191 AWAYDTTNYVPAFAGAAFLYFIMCFPLATWARRKE 225



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF  T  ++   +I A ++G + GA   + NK++  I R+YVE+F+N P LV    +
Sbjct: 26  FAKGFFYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRIYVEIFQNTPLLVQFVVV 85

Query: 149 YKSV 152
           +  +
Sbjct: 86  FYGI 89


>gi|153855472|ref|ZP_01996603.1| hypothetical protein DORLON_02617 [Dorea longicatena DSM 13814]
 gi|149752126|gb|EDM62057.1| hypothetical protein DORLON_02617 [Dorea longicatena DSM 13814]
          Length = 227

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 13/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLS---RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             I ++   L  +LS+    +    +HF  K    L  +Y+S F   G P L+ + L Y 
Sbjct: 23  LWITIYVSALAFLLSIILGAILAIIQHFRVKILSQLAKVYVSYF--RGTPLLIQLFLFY- 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++            P+  +L + L   +AA+I+E +R  + +V +GQ EA+IA 
Sbjct: 80  --YGLPMV-----FDVMKRCPKTFALVLCLGLNSAAYISESIRGAIESVDKGQYEASIAF 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLTH +    ++LPQA  + IPP+ +  L+++K SSL + +G  D++           + 
Sbjct: 133 GLTHPQMMLKIILPQAAVAAIPPIVNSCLDIIKMSSLGMTIGIQDIMGEAQLTAATYYKT 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
            E  ++    Y  L+I++ +   ++  
Sbjct: 193 FETYILAAVFYWILAIVLGVVQKKVEK 219



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + +  +PYT   +    +L G   T +++    + + I+G ++   +    K+++ + +V
Sbjct: 4   LTETFIPYTKVLT--PLLLEGLWITIYVSALAFLLSIILGAILAIIQHFRVKILSQLAKV 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVL 156
           YV  FR  P L+ +F  Y  +  V 
Sbjct: 62  YVSYFRGTPLLIQLFLFYYGLPMVF 86


>gi|326797353|ref|YP_004315173.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326548117|gb|ADZ93337.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 366

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 18/227 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                 LT        V SF LG++L+L      R  +    K++ +++I T     L T
Sbjct: 154 NWGGLFLTTLLGVVGIVASFPLGVLLAL-----GRRSNMPIVKSVCVVFIETIRAVPLIT 208

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ +A    +    P    FN         + + + I ++ ++AA++AE++R GL A+P+
Sbjct: 209 ILFMASV-MIPLFLPEGLNFN---------KLLRVLIGITLFSAAYMAEVIRGGLQAIPK 258

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--- 351
           GQ EAA A+GLT+ ++  LV+LPQA++ +IP + + ++ L K+++L   VG  DL+    
Sbjct: 259 GQYEAADAMGLTYWQSMCLVILPQALKLVIPGIVNTFIGLFKDTTLVYIVGMFDLLGRIQ 318

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 N  G  IE      F+Y  +   ++ +   +  K+    K+
Sbjct: 319 AANHDANWLGTTIEGYAFAGFVYWIICFGMSRYSMAVERKLDTGHKR 365



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L   G++ +  +G L+  GR S   +V  +C V++E  R +P + ++F     
Sbjct: 157 GLFLTTLLGVVGIVASFPLGVLLALGRRSNMPIVKSVCVVFIETIRAVPLITILFMASVM 216

Query: 152 VLSVLPIPDHSIVL 165
           +   LP   +   L
Sbjct: 217 IPLFLPEGLNFNKL 230


>gi|187777535|ref|ZP_02994008.1| hypothetical protein CLOSPO_01126 [Clostridium sporogenes ATCC
           15579]
 gi|187774463|gb|EDU38265.1| hypothetical protein CLOSPO_01126 [Clostridium sporogenes ATCC
           15579]
          Length = 213

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 110/231 (47%), Gaps = 19/231 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + +     +    L    ++        +FS  LGI+++     + ++   K  K +  L
Sbjct: 1   MNVSNFSDITIFILKGSIISFKLFIVTIIFSIPLGILIA-----MGKNSKIKPLKII--L 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              T++  G P ++ +   Y   F  PV+       G  + P   + Y+       A++A
Sbjct: 54  SAYTWIFRGTPLMLQLFFAY---FGLPVI-------GIRLEP-LTAAYLTFIINYGAYLA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+S+L  
Sbjct: 103 ETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVA 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+G  D++     ++ +    I    I   IYL ++  + +    L  K A
Sbjct: 163 AIGIGDMLRAAKEVVTRDF-TITPFFIAAAIYLLITAFLVIIFRTLEKKYA 212



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + +F L    +I +  +G L+  G+ S  K +  I   Y  +FR  P ++ +FF 
Sbjct: 13  ILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIKPLKIILSAYTWIFRGTPLMLQLFFA 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +          +N 
Sbjct: 73  YFGLPVIGIRLEPLTAAYLTFIINY 97


>gi|107022252|ref|YP_620579.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116689197|ref|YP_834820.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105892441|gb|ABF75606.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647286|gb|ABK07927.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 229

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLVGWNQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GSAYGMSGARVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|256059928|ref|ZP_05450113.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella neotomae
           5K33]
 gi|261323898|ref|ZP_05963095.1| ABC transporter [Brucella neotomae 5K33]
 gi|261299878|gb|EEY03375.1| ABC transporter [Brucella neotomae 5K33]
          Length = 241

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 13/226 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +     +           I + + +    L      L    H +  + +   Y+
Sbjct: 1   MNFDFSVIFDNWTLFARGTWLTIVIAIVAMIATGFLISIPIALMALSHRRPLRWISSAYV 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       +VL    Y L F                 PE +   IAL+ + +++ AEI
Sbjct: 61  EWFRNI-PFIVVLYLFFYGLPF------------MGVRLPESIVGTIALAFFASSYFAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S+   +
Sbjct: 108 IRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             A+L   G  I  +T    EI L    IY  ++ + A  M+R   
Sbjct: 168 TVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHRTEK 213



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPA-TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            T    G   T  +A   MI    +I   +    LS  + + WI   YVE FRNIP +VV
Sbjct: 12  WTLFARGTWLTIVIAIVAMIATGFLISIPIALMALSHRRPLRWISSAYVEWFRNIPFIVV 71

Query: 145 IFFLYKSVL 153
           ++  +  + 
Sbjct: 72  LYLFFYGLP 80


>gi|293606209|ref|ZP_06688572.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815356|gb|EFF74474.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 217

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   + VL + L+L A+ + R    +  + L  +Y+  F   G   LV +   +  
Sbjct: 21  VTLQIMGGAVVLAVPLAL-ASGIGRLSPLRPLRWLSSVYVEVF--RGTSALVQL---FWF 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+             P  +   + L+    A+ AE+VR  + AVP GQ EA +AL 
Sbjct: 75  YFVLPLF--------GVQLPAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALN 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R +++PQA+ +++PP  +  + L+KN++L   +   DL   G  + ++T +  
Sbjct: 127 LTRAQIMRRIVVPQAVPAMLPPAGNLLIELMKNTALVSLITITDLTFRGQLLRSETLRTT 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           EI  + + +Y +++++I   +  L  ++ ++
Sbjct: 187 EIFTLMLLMYFAVALVITAGVRALERRVRVR 217



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ A  +    G GRLS  + + W+  VYVEVFR    LV +F+ 
Sbjct: 15  LLEGLAVTLQIMGGAVVLAVPLALASGIGRLSPLRPLRWLSSVYVEVFRGTSALVQLFWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +          +V    + LN
Sbjct: 75  YFVLPLFGVQLPAMLVGIVVLALN 98


>gi|288904631|ref|YP_003429852.1| amino acid ABC transporter permease protein [Streptococcus
           gallolyticus UCN34]
 gi|288731356|emb|CBI12907.1| putative amino acid ABC transporter permease protein [Streptococcus
           gallolyticus UCN34]
          Length = 267

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 2/184 (1%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLY 270
            +T    P+  +    + G P LV + L Y     F K +  ++ F       P  +   
Sbjct: 69  NRTKFLYPIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLKIRYGFDWNINAIPASVFAV 128

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
            A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 129 TAFAFNEAAYTSETIRAAIQAVDVGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINS 188

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K +SLA   G  ++ +    +     +  E  +    +Y  +SI+I      +  
Sbjct: 189 LIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIEQIGRLIEK 248

Query: 391 KIAL 394
           ++ +
Sbjct: 249 RMDI 252


>gi|260768538|ref|ZP_05877472.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260616568|gb|EEX41753.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|315180250|gb|ADT87164.1| general L-amino acid transport system permease protein AapM [Vibrio
           furnissii NCTC 11218]
          Length = 365

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 122/266 (45%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  L       ++ + +  +  +  ++   ++    GL   +        + +   ++GI
Sbjct: 110 IALLAYERTPKRTWIWLFFVNIYPFLMAGLLYGGVFGLEVVSTHKWGGLLVTLIIALVGI 169

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V+SL    A  L R       ++L  +YI  +    L T++ +A           +    
Sbjct: 170 VVSLPIGVALALGRRSDMPVIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPL 219

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + + +   I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 220 FLSEGSETDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVAL 339

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  K+    K+
Sbjct: 340 VFWVFCFGMSRYSIWLERKLHTGHKR 365



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 33/66 (50%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ +  IG  +  GR S   ++  +C VY+EV+R +P + V+F   
Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRRSDMPVIRSLCTVYIEVWRGVPLITVLFMAS 214

Query: 150 KSVLSV 155
             +   
Sbjct: 215 VMLPLF 220


>gi|237799857|ref|ZP_04588318.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022712|gb|EGI02769.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 365

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + +V  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGICFLVIYPVVAFYLLHGGVFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 13/202 (6%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F   
Sbjct: 155 WGGLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSS 214

Query: 150 KSVLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
             +   +P   +          V+ F        +      +         +  LG   S
Sbjct: 215 VMLPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRS 274

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGS 260
           +    L +         +P +  +   +F   +LV+I   +  L+  K       ++G +
Sbjct: 275 MGLVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMA 330

Query: 261 TVSPEFMSLYIALSCYTAAFIA 282
           T    F +L   + C+  +  +
Sbjct: 331 TEGYVFAALVFWIFCFGMSRYS 352


>gi|254248930|ref|ZP_04942250.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
 gi|124875431|gb|EAY65421.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
          Length = 243

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 90/235 (38%), Gaps = 3/235 (1%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                  +                K+ V S    ++L L     ++       K++   Y
Sbjct: 9   SFWVPHMIFQGFGPLLWAGTVETVKLAVLSLAASLILGLAGAA-AKLSANGVLKSVGTFY 67

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T LI  +P LVL+ L +                       F +  + L     A+  E
Sbjct: 68  --TTLIRAVPDLVLMLLLFYGIQILLNDVTDLLGWDQIDIDPFAAGVVTLGFIYGAYFTE 125

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + + +  L+K ++L   
Sbjct: 126 TFRGAFLAVPRGQLEAGFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSI 185

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 186 IGLADVVKASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 240



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            VP+     +   +  G V T  LA   +  + I+G    A +LSAN ++  +   Y  +
Sbjct: 11  WVPHMIFQGFGPLLWAGTVETVKLAVLSLAASLILGLAGAAAKLSANGVLKSVGTFYTTL 70

Query: 136 FRNIPPLVVIFFLYKSV 152
            R +P LV++  L+  +
Sbjct: 71  IRAVPDLVLMLLLFYGI 87


>gi|124486251|ref|YP_001030867.1| hypothetical protein Mlab_1435 [Methanocorpusculum labreanum Z]
 gi|124363792|gb|ABN07600.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanocorpusculum labreanum Z]
          Length = 255

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 13/189 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            +SR +     K L  LY+  F   G P LVL+ + Y           F       V   
Sbjct: 66  AVSRVYGPTPVKWLAKLYVIFF--RGCPLLVLLFILY-----------FGLPSIGIVLGS 112

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           + S  +      +A+ +E +R GL ++ RGQ+ AA +LG+T  +    V++PQA+R  +P
Sbjct: 113 YFSALVGFILCNSAYNSEYLRGGLQSIKRGQLLAARSLGMTKAQGVMYVVVPQALRRALP 172

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            ++++++ L+K SSLA  V   +L      I ++     E        YL L  +  + +
Sbjct: 173 GVSNEFIYLIKYSSLAYVVAVIELTGAAKIIASKYFMYFEAFAAVGVFYLILVTITTIGV 232

Query: 386 NRLNAKIAL 394
           + L  K A+
Sbjct: 233 HWLEKKYAI 241



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 40/101 (39%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G V T  L         ++G LV   R+     V W+ ++YV  FR  P LV++F 
Sbjct: 39  ALWDGLVVTIQLVLMTAPLGLLLGLLVAVSRVYGPTPVKWLAKLYVIFFRGCPLLVLLFI 98

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           LY  + S+  +         G  L N   +   L     + 
Sbjct: 99  LYFGLPSIGIVLGSYFSALVGFILCNSAYNSEYLRGGLQSI 139


>gi|121607717|ref|YP_995524.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552357|gb|ABM56506.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 241

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 18/234 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +    F    N   LS    T+           V+G  L+L     +R    +   A  
Sbjct: 5   WNWSGFFDYLFNPYILSGALTTLWLTLAAIAGGLVVGCALAL-----ARLSRHRWLAAPA 59

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  F   G P LV + + Y      P L                S  + L    AA+
Sbjct: 60  HFYIWVF--RGTPLLVQLIIIYT---GLPQL--------GVKLSVVESALLGLILNEAAY 106

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR G+ +V  GQ  AA A+G +  ++ R +++PQAMR IIP L +    LLK +S+
Sbjct: 107 LAEVVRGGIQSVSVGQTNAARAVGFSSAQSMRYIVMPQAMRLIIPTLGNSINGLLKTTSI 166

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +   +L+     +I +    +E+ ++    YL ++ +      R+      
Sbjct: 167 TSVISMEELLRRTQVLIQEKFMVLELFIVAAIYYLLMTTVWDFIQRRIERHYGR 220



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   IL G + T WL  + +    ++G  +   RLS ++ +A     Y+ VFR  P LV 
Sbjct: 15  FNPYILSGALTTLWLTLAAIAGGLVVGCALALARLSRHRWLAAPAHFYIWVFRGTPLLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +  +Y  +  +            G+ LN
Sbjct: 75  LIIIYTGLPQLGVKLSVVESALLGLILN 102


>gi|312962620|ref|ZP_07777110.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311283200|gb|EFQ61791.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 229

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P   +    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPMLGYDDYIDLNP-LAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGL 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++  +    V++PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSGFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVR 225



 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     +L      +     + LN 
Sbjct: 65  ILLIFYGGQDLLNRVAPMLGYDDYIDLNP 93


>gi|323529256|ref|YP_004231408.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386258|gb|ADX58348.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 216

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 14/201 (6%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            V G ++ L A  L R F       +  LY   F   G P L+ +   Y           
Sbjct: 28  IVGGTLIGLLAAVL-RSFGPWGTPTVARLYTELF--RGTPVLITLMFIY----------- 73

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F           F +  + LS Y  A+IAE+ RSG+ AVP+GQ E +  LGL+  +    
Sbjct: 74  FGVSYFGYAIDVFAAGVVGLSVYQGAYIAEVFRSGIEAVPKGQWEVSQILGLSKTQTFFS 133

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQ  + ++PPL  QYL+L+K++S+   +G ++L+  G  I+++ G+ +EI  +   +
Sbjct: 134 VILPQTGKIVMPPLIGQYLSLIKDTSIVSMIGMSELMHGGQAIVDRVGKPVEIYGLVAVL 193

Query: 374 YLSLSIMIALFMNRLNAKIAL 394
           Y  +   ++ ++   + + +L
Sbjct: 194 YFIVCFPLSQWVRHHDRRRSL 214



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+ + ++  T+IG L    R         + R+Y E+FR  P L+ + F+
Sbjct: 13  LFQGLLATLLLSAAAIVGGTLIGLLAAVLRSFGPWGTPTVARLYTELFRGTPVLITLMFI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  V       D       G+ +               A
Sbjct: 73  YFGVSYFGYAIDVFAAGVVGLSVYQGAYIAEVFRSGIEA 111


>gi|161620737|ref|YP_001594623.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|254703029|ref|ZP_05164857.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|260568042|ref|ZP_05838511.1| cystine transport system permease [Brucella suis bv. 4 str. 40]
 gi|161337548|gb|ABX63852.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|260154707|gb|EEW89788.1| cystine transport system permease [Brucella suis bv. 4 str. 40]
          Length = 226

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 44  VRLFASVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I+ +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 91  AALISFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 151 SNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 210

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 211 LERRFGRY 218


>gi|17546977|ref|NP_520379.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17429278|emb|CAD15965.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 231

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 124/244 (50%), Gaps = 21/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HF 211
           +P+  + +      +   ++   L++   A  FV +  L I ++L     +         
Sbjct: 1   MPNFDLSMLLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQA 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + +  + +PLL    F  FG P L+ +++K  L+                ++ E  S  I
Sbjct: 61  YVEAIRNVPLLAHMLFWYFGAPQLLPMSVKTWLY---------------NLNYEAASAVI 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA++AE +RSGL ++P+ Q EA+ ALGL+  +A RLV+LPQ++R  +PPL SQ 
Sbjct: 106 ALVLYTAAYMAEDIRSGLRSIPKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQT 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL KNSS+A+ +G A+L+     + + T +  E        YLS+S+ I +F      +
Sbjct: 166 LNLWKNSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVFSAWYQHR 225

Query: 392 IALK 395
             ++
Sbjct: 226 YPVR 229



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GF  +  L     + A  +   V   RL+    +  + + YVE  RN+P 
Sbjct: 11  SGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAVGQAYVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           L  + F Y     +LP+   + +  
Sbjct: 71  LAHMLFWYFGAPQLLPMSVKTWLYN 95


>gi|330875048|gb|EGH09197.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 220

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L     +     +  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPNLLAGLGLGLELALISIAIGCVIGLM-NAFALLSRYRALRMVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFVVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|291521932|emb|CBK80225.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Coprococcus catus GD/7]
          Length = 236

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 12/185 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K   A+   Y++ F   G P +V + + Y +      L                   +  
Sbjct: 63  KVLNAICSFYVALF--RGTPMVVQLLVFYYVLLPIIGLK----------ITGVQVAMMVF 110

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              + A+I+EI+RSG+ +V  GQMEA  A+GL+   +   +++PQA+++I+P L +++++
Sbjct: 111 GLNSGAYISEIMRSGIQSVDPGQMEAGRAVGLSFGTSMIKIVIPQAVKNILPTLGNEFIS 170

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K +S+   VG ADL      I + + + +   L+   IY+ L ++I+L +  +   + 
Sbjct: 171 LIKETSVVSFVGAADLYVAFNYIGSNSYEFMVPYLVMALIYIVLVLIISLLIKLMERSLK 230

Query: 394 LKEKK 398
             +++
Sbjct: 231 KSDRR 235


>gi|123444013|ref|YP_001007983.1| ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090974|emb|CAL13857.1| Putative ABC transporter permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 369

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P        T +++G V          +       + G GR  
Sbjct: 79  WVFIHARFG-QFMYGLYPIEQRWRINTTLIIGLVT---------LIPLFWRAMPGRGR-- 126

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  + PL+V   LY     +  +                     T
Sbjct: 127 -----------YLAVWAVVYPLLVWVMLYGGFFGLTRVETRQ-------------WGGLT 162

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L     +R       + L +++I  +    L T++ ++ 
Sbjct: 163 LTLIIAAVGIAGALPLGILLAL-----ARRSSMPVVRILSVVFIEFWRGVPLITVLFMS- 216

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 217 ---------SVMLPLFMTEGTSIDKLIRALVGVVLFQSAYVAEVVRGGLQALPKGQTEAA 267

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 268 ESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 327

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 328 AWLGMSTEGYVFAAAVYWIFCFSMSRYSQHLEKRFHTGR 366


>gi|77459313|ref|YP_348820.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77383316|gb|ABA74829.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 220

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +    ++ + S  +G V+ L     +     +  + L  +Y++  +I   
Sbjct: 11  WRDFDTLLAGLGLGLELALVSIAIGCVIGLL-MAFALLSRHRALRVLASVYVT--VIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y           F          +  S  I LS Y  A++ E+ R GL+++
Sbjct: 68  PILVLILLIY-----------FALPSLGIRLDKIPSFIITLSLYAGAYLTEVFRGGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA +A+GL   +    V +P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 PKGQREAGLAIGLGEWQVKAYVTVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y++   +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRLAIRR 220



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
             +    +IG L+    LS ++ +  +  VYV V RN P LV+I  +Y ++ S+    D 
Sbjct: 30  VSIAIGCVIGLLMAFALLSRHRALRVLASVYVTVIRNTPILVLILLIYFALPSLGIRLDK 89

Query: 162 SIVLPFGMFLN 172
                  + L 
Sbjct: 90  IPSFIITLSLY 100


>gi|239616534|ref|YP_002939856.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505365|gb|ACR78852.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
          Length = 224

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 18/224 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T++      V  F++GI+L+L     +R +     K +  + I   +I 
Sbjct: 12  FWPEFLRGLGVTLEMTLISVVAGFLIGILLAL-----ARVYGNALLKGIATVIIE--VIR 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + + Y                         +  I  S  + A+ AE +RS + 
Sbjct: 65  GTPLLVQLFILYY-----------GLPPYGVSLTPLTAALIGFSINSGAYQAEYLRSAIN 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++   QM AA +LG+T  +A   ++LPQA+R +IP   ++++ LLK +SLA  VG  +L+
Sbjct: 114 SIQHTQMLAARSLGMTKWQAIFNIILPQALRRVIPAWANEFIYLLKYTSLAYIVGAPELM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +    I ++  Q  E+ L+   IYL + +     +  +  K+ +
Sbjct: 174 AKAKFIASRNFQFFEVYLVVALIYLIVVLAFTKILTTVEKKVRI 217



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 35/96 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    L G   T  +    ++   +IG L+   R+  N L+  I  V +EV R  P LV 
Sbjct: 12  FWPEFLRGLGVTLEMTLISVVAGFLIGILLALARVYGNALLKGIATVIIEVIRGTPLLVQ 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           +F LY  +               G  +N+       
Sbjct: 72  LFILYYGLPPYGVSLTPLTAALIGFSINSGAYQAEY 107


>gi|190894713|ref|YP_001985006.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700374|gb|ACE94456.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 219

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 12/227 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTF 227
           M  +   +     T+    KI + + VLG  +++     L+             +   + 
Sbjct: 1   MEWDWDFVWQIMPTLLEGFKITILATVLGAAVAMVVGLGLAIARRSPVAAISRTVGFVSE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P LV +   + +  D                    +  I +  + A + AE+ R+
Sbjct: 61  FIRGTPLLVQLYFIFYVLPDI-----------GIRLSPLTAGVIGMGIHYATYTAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VPRGQ EAA A  L  R+A   V+LPQA+  +IP L + ++ + K + L  A+   
Sbjct: 110 GIENVPRGQWEAARATNLATRQAWIHVVLPQAIPPMIPALANYFIAMFKETPLLSAITVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L++   +I N   + IE + +    +L +S++  + +  L  + A 
Sbjct: 170 ELMNQAKSIANSNYRYIEPMTLVGVFFLVISLVSVVGLRWLEERYAR 216



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         +L GF  T      G   A ++G  +   R S    ++       E  R
Sbjct: 4   DWDFVWQIMPTLLEGFKITILATVLGAAVAMVVGLGLAIARRSPVAAISRTVGFVSEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P LV ++F++  +  +   
Sbjct: 64  GTPLLVQLYFIFYVLPDIGIR 84


>gi|168181318|ref|ZP_02615982.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|237793771|ref|YP_002861323.1| amino acid ABC transporter permease [Clostridium botulinum Ba4 str.
           657]
 gi|182675517|gb|EDT87478.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Bf]
 gi|229262160|gb|ACQ53193.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum Ba4 str. 657]
          Length = 211

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 19/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    L    ++        +FS  LGI+++     + ++   K  K +  L   T++ 
Sbjct: 6   DITIFILKGSIISFKLFIVTIIFSIPLGILIA-----MGKNSKIKPLKII--LSAYTWIF 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ +   Y   F  PV+       G  + P   + Y+       A++AE  R+G+
Sbjct: 59  RGTPLMLQLFFAY---FGLPVI-------GIRLEP-LTAAYLTFIINYGAYLAETFRAGI 107

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+S+L  A+G  D+
Sbjct: 108 ESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGDM 167

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     ++ +    I    I   IYL ++  + L    L  K A
Sbjct: 168 LRAAKEVVTRDF-TITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + +F L    +I +  +G L+  G+ S  K +  I   Y  +FR  P ++ +FF 
Sbjct: 11  ILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIKPLKIILSAYTWIFRGTPLMLQLFFA 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +          +N 
Sbjct: 71  YFGLPVIGIRLEPLTAAYLTFIINY 95


>gi|146307936|ref|YP_001188401.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145576137|gb|ABP85669.1| L-arginine ABC transporter membrane protein / L-ornithine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 232

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L      +    KI + S  +G+ L+L    L R            LY 
Sbjct: 1   MIFDYQMIWENLPLYFSGVLVTLKILLISLAVGLSLALPL-ALMRVSKSPLVNFPAWLY- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAF 280
            T++I G P LV + L Y        L QF+ I  S + P F        +A +  T+A+
Sbjct: 59  -TYVIRGTPMLVQLFLIYY------GLAQFDVIRDSFMWPYFSSATFCACLAFAINTSAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L  +SL
Sbjct: 112 TAEILAGSLKATPHGEIEAAKAMGMSRAKLYRRILLPSALRRALPQYSNEVIMMLHTTSL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A  V   D+     T+ +Q     E  +     YL L+ ++         +
Sbjct: 172 ASIVTLIDITGAARTVSSQYYMPFEAFITAGLFYLVLTFILVRLFKLAERR 222



 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 40/119 (33%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  Y            G + T  +    +     +   +   R+S + LV +   +Y  V
Sbjct: 2   IFDYQMIWENLPLYFSGVLVTLKILLISLAVGLSLALPLALMRVSKSPLVNFPAWLYTYV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            R  P LV +F +Y  +     I D  +   F        L+F   T    A+I   S 
Sbjct: 62  IRGTPMLVQLFLIYYGLAQFDVIRDSFMWPYFSSATFCACLAFAINTSAYTAEILAGSL 120


>gi|299066139|emb|CBJ37322.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 231

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 73/244 (29%), Positives = 124/244 (50%), Gaps = 21/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HF 211
           +P+  + +      +   ++   L++   A  FV +  L I ++L     +         
Sbjct: 1   MPNFDLSMLLSGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAIGQT 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + +  + +PLL    F  FG P L+ +++K  L+                ++ E  S  I
Sbjct: 61  YVEAIRNVPLLAHMLFWYFGAPQLLPMSVKTWLY---------------NLNYEAASAVI 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA++AE +RSGL ++P+ Q EA+ ALGL+  +A RLV+LPQ++R  +PPL SQ 
Sbjct: 106 ALVLYTAAYMAEDIRSGLRSIPKEQFEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQT 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL KNSS+A+ +G A+L+     + + T +  E        YLS+S+ I +F      +
Sbjct: 166 LNLWKNSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVFSAWYQHR 225

Query: 392 IALK 395
             ++
Sbjct: 226 YPVR 229



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GF  +  L     + A  +   V   RL+    +  I + YVE  RN+P 
Sbjct: 11  SGQYHQWLVTGFQLSIKLTALAFVLALPLAIAVALLRLAPAAPLRAIGQTYVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           L  + F Y     +LP+   + +  
Sbjct: 71  LAHMLFWYFGAPQLLPMSVKTWLYN 95


>gi|299065104|emb|CBJ36268.1| putative amino-acid ABC transporter [Ralstonia solanacearum CMR15]
          Length = 223

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 14/226 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +      L           ++ V SF+L  V+ L    L R    K   A     ++  
Sbjct: 6   FIEHAQEFLPILLQGAVVTVEVTVLSFLLSSVIGLAL-ALMRLSPVKAVSAAGATVVN-- 62

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP +V +   Y           F           F +  I L    +A+ AE  R+
Sbjct: 63  IIRGLPIIVQLFYIY-----------FVLPDVGIQLTAFQAGVIGLGIAYSAYQAENFRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV  GQ EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A
Sbjct: 112 GIEAVDPGQREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVA 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++   G  I + T Q + +  +   +YL +S+ +   + RL  ++ 
Sbjct: 172 EMTRAGQLIASSTFQNMTVYTLVALLYLLMSLPLVFGLRRLERRMG 217



 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 38/106 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G V T  +     + +++IG  +   RLS  K V+      V + R +P 
Sbjct: 10  AQEFLPILLQGAVVTVEVTVLSFLLSSVIGLALALMRLSPVKAVSAAGATVVNIIRGLPI 69

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +V +F++Y  +  V            G+ +               A
Sbjct: 70  IVQLFYIYFVLPDVGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEA 115


>gi|296454582|ref|YP_003661725.1| polar amino acid ABC transporter inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296184013|gb|ADH00895.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
          Length = 569

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 110/275 (40%), Gaps = 23/275 (8%)

Query: 122 NKLVAWICRVYVEVFRNIPPL-VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
            ++V WI  +   V      + +      ++ LS            +  F          
Sbjct: 224 IRIVNWIAGILFAVVLVFILMRLHNPPDGENQLSWELWKPAVEREAWTDFYLPGLWMTIK 283

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+       VF  V G+          R       + +  + +       +  L++   
Sbjct: 284 ATIVAVVGAVVFGLVFGV---------GRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFW 334

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
           ++      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA+
Sbjct: 335 RWFAFAGLP-------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREAS 381

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +  
Sbjct: 382 LALGLTETQSLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMY 441

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              ++ +++   IY     +++     L +++  +
Sbjct: 442 FNILQTLVMAAVIYFIACWLLSRIAEWLPSRMQQR 476



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 18/151 (11%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R+ N    I+ A++L  I +   +N  +   + +       L + A              
Sbjct: 225 RIVNWIAGILFAVVLVFILMRL-HNPPDGENQLSWE-----LWKPA-----------VER 267

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            ++    L G   T       ++ A + G + G GRL  N LV  +  V VE  R +P L
Sbjct: 268 EAWTDFYLPGLWMTIKATIVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIVEFCRAVPVL 327

Query: 143 VVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           +++ F ++    + LP P +  V+   +  N
Sbjct: 328 LLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 358


>gi|261217290|ref|ZP_05931571.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261320161|ref|ZP_05959358.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|260922379|gb|EEX88947.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261292851|gb|EEX96347.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
          Length = 250

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 103/255 (40%), Gaps = 13/255 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
              ++     +   +        ++P  + L    L                      + 
Sbjct: 1   MHFLLCMFIPARFIIPITAKEPKLVPDWLQLMADSLPTLLWAGLIFTIPLTLLSFTFGLA 60

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               T L R F      ++   Y+  F   G P LV + + +                  
Sbjct: 61  LGLLTALVRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIG 107

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  I  +    A+ +EI+R+ + +VP+GQ EAA  +G++ R+A    +LPQA 
Sbjct: 108 IYLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYFIGMSWRQALIRTILPQAT 167

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +PPL++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +
Sbjct: 168 RTAVPPLSNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSI 227

Query: 381 IALFMNRLNAKIALK 395
           ++    RL  +    
Sbjct: 228 LSALQVRLERRFGRY 242



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 33  ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 92

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 93  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 123


>gi|251788998|ref|YP_003003719.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537619|gb|ACT06240.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 238

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 95/230 (41%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   L+   +T+           ++ I L++      R +          
Sbjct: 6   QQYWQALLWSDGYRLTGLAMTLWLLIVSVTLGGLMAIPLAIARVSPRRRYRLPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +  T++  G P  V + + Y   +   ++   + +  +          +AL+  T A+ 
Sbjct: 60  -WAFTYVFRGTPLYVQLLVFYSGVYSLEIVRGTDLL-NAFFRSGLNCAVLALALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L ++SLA
Sbjct: 118 TEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNEVILMLHSTSLA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   DL+ V   I   T +      I   +YL++S ++     +   +
Sbjct: 178 FTVTVPDLLKVARDINAATYKPFYAFGIAGVMYLAISFVLISLFRKAERR 227


>gi|33591320|ref|NP_878964.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
 gi|33570962|emb|CAE40434.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
          Length = 264

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 8/241 (3%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P G       L+    T+ T A  ++ +  +GIV+ +     +R    K
Sbjct: 15  NWNWHIFLEMSPTGGIYLGTLLTGMAWTLGTAALAWILALGIGIVVGV-----ARTTQSK 69

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
             + L   Y+  F    +P LV + L Y +     PV               F+   + L
Sbjct: 70  WARILGATYVEFF--RNIPLLVQMFLWYFVVPEILPVQLGDAIKSIPPPWGIFIPAVLCL 127

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             YT++ +AE VR+G+ + P  Q  AA ALG+   +  R VLLP + R I+PPLTS+ LN
Sbjct: 128 GFYTSSRVAEQVRAGIESRPARQRMAATALGMRPSQVYRYVLLPTSFRIILPPLTSELLN 187

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+KN+S+A  +G  +LV    ++   + Q  E        Y  L++++   M  +  ++A
Sbjct: 188 LIKNTSVAFTIGLLELVGAARSMQEFSFQVFEAFAGATLCYFLLNLIVLRAMRYIETRLA 247

Query: 394 L 394
           +
Sbjct: 248 V 248



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T   A    I A  IG +VG  R + +K    +   YVE FRNIP LV 
Sbjct: 31  YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARILGATYVEFFRNIPLLVQ 90

Query: 145 IFFLYKSVLSVLP 157
           +F  Y  V  +LP
Sbjct: 91  MFLWYFVVPEILP 103


>gi|157161794|ref|YP_001459112.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           HS]
 gi|157067474|gb|ABV06729.1| histidine ABC transporter, permease protein HisM [Escherichia coli
           HS]
          Length = 238

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 CDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|332180728|gb|AEE16416.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           brennaborense DSM 12168]
          Length = 211

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 14/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            + KIF  + +  + L L     +R            L++   +I G P ++ +   Y  
Sbjct: 14  VSLKIFFLTLLFSLPLGL-PFAAARMSKNPVLSVPAKLFM--LIIRGTPLILQLIFVYFA 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +                   F +  IA+S   AA+ AEI R G+ +V +GQ EA   LG
Sbjct: 71  PYYL----------FKISYNRFTAAIIAMSVNYAAYFAEIYRGGIESVSKGQYEAGKVLG 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +    ++LPQ ++ I+P   ++ + L+K+++LA  +G A+L  V     ++    +
Sbjct: 121 FTRLQTFFRIVLPQVIKRILPATGNEVITLVKDTALAQVIGVAELFRVAQNAASREFSTM 180

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I  +    Y  ++ +++    R   K+    
Sbjct: 181 PIF-VAGVFYFFMNWIVSAVFVRAEKKLDYYR 211


>gi|251792008|ref|YP_003006728.1| arginine transporter permease subunit ArtQ [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533395|gb|ACS96641.1| histidine transport system permease protein HisQ [Aggregatibacter
           aphrophilus NJ8700]
          Length = 221

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 9/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    LS           + V S V G++LS+    L  +     GK + +L     L+ 
Sbjct: 1   MFFDFLSLMFTAALMTLGLAVCSLVAGLLLSMLFAVLEANR--VVGKPMAVL---VALLR 55

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +   +      G       F     ALS   AA+ ++ +R  + 
Sbjct: 56  GLPEILVVLLVYFGSSEVVEM----ITGEYIEFGAFGCGVFALSLIFAAYASQTLRGAIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 112 AIPKGQWESGAALGLSKGYTFLHIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                I   T Q      I   IYL ++++  + + +L  +    E++
Sbjct: 172 RQAQLINTNTHQPFTWYGIAALIYLVVTLVSQVGIRKLELRFTRFERE 219


>gi|223932682|ref|ZP_03624681.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|223898652|gb|EEF65014.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
          Length = 232

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                      +              I V +F++ + L +    LS     K  K +  +
Sbjct: 8   PYAWENWVSYFKDFPTFFQGFLFTLAISVGAFIMAMFLGIVFGSLS-SSKNKVLKIIARV 66

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+        P LV   + Y   +  P++  +  +        + +  I +  Y  A+IA
Sbjct: 67  YVE--YYQNTPLLVQFMIVY---YGLPLISNYVLMPSI-----YWTAVICIGLYHGAYIA 116

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++R+G+ AVP GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q +NL+KN++   
Sbjct: 117 EVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVA 176

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +  AD++ +  +        I       F+Y  +   +A +  R+  K
Sbjct: 177 IISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEEK 225



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++    I A  +G + G+   S NK++  I RVYVE ++N P LV    +
Sbjct: 24  FFQGFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIV 83

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y  +  +        +  
Sbjct: 84  YYGLPLISNYVLMPSIYW 101


>gi|37681432|ref|NP_936041.1| ABC-type glutamine transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37200184|dbj|BAC96012.1| ABC-type glutamine transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 246

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 29/259 (11%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+++  L                   G+      ++    T+  +    +F+  LG++++
Sbjct: 8   LMMLLPLTGCSDYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAMTLGLMVA 67

Query: 202 LFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L A    +        + +  +A+P+L +  ++ +GLPTL+ ++L +             
Sbjct: 68  LPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWVYYGLPTLLDVSLDHY------------ 115

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                       +  IAL+   +AF+AE+ R G+ ++ RGQ EAA +LGL + +  RLV+
Sbjct: 116 -----------WAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSLGLNYWQKMRLVI 164

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA R ++P L +Q++ +LK SSL   +G +DL      ++      +EI    +  YL
Sbjct: 165 LPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYL 224

Query: 376 SLSIMIALFMNRLNAKIAL 394
            L +M++  +  L  + A+
Sbjct: 225 LLILMVSQAVRWLEKRSAI 243



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    ++ GF +T  ++   M+ A  +G +V    LS  K +  + R+YVEV R IP LV
Sbjct: 36  TNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLV 95

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 96  LLLWVYYGLP 105


>gi|86138394|ref|ZP_01056968.1| amino acid ABC transporter [Roseobacter sp. MED193]
 gi|85824919|gb|EAQ45120.1| amino acid ABC transporter [Roseobacter sp. MED193]
          Length = 218

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 18/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+       + SF  GI L++ A       +       P   I +FL  G P L
Sbjct: 16  LLGALWTIGITVGAALVSFFGGIFLAVIA------LYAPAVVRWP-FRIFSFLFLGTPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y           F  +      P F++  I L  + A + +E+ ++ ++AV +G
Sbjct: 69  LQLFLIY-----------FGLVQIGIDVPAFVAGVIGLGLHFAVYNSELFQTSILAVDKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA  LGL+  +A R V++PQA+R +IPP+ +  + LLK+S+L   +G ++L      
Sbjct: 118 QIEAARTLGLSRMQALRKVVVPQAVRDVIPPIGNNMIALLKDSALVSVIGVSELTLSAQR 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I  T +  E  ++   IY  +++ +   + R+  +I
Sbjct: 178 AIGSTYRPFEFYVLVAAIYYIINLGMEAVLRRVERRI 214



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 42/111 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   +L+G + T  +     + +   G  +    L A  +V W  R++  +F
Sbjct: 3   LDFSVIPKYLDIVLLGALWTIGITVGAALVSFFGGIFLAVIALYAPAVVRWPFRIFSFLF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              P L+ +F +Y  ++ +       +    G+ L+    +         A
Sbjct: 63  LGTPLLLQLFLIYFGLVQIGIDVPAFVAGVIGLGLHFAVYNSELFQTSILA 113


>gi|119383036|ref|YP_914092.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Paracoccus denitrificans PD1222]
 gi|119372803|gb|ABL68396.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 218

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 14/224 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+   +      K+ +    L +V++  A  L R       + L   YI  F   G
Sbjct: 4   WAGYLTLILMGAWVTVKLTLMGSALALVVAFVAG-LGRISRHAAVRWLATAYIEFF--RG 60

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
               V +   + ++F  P+        G+ ++P   +  +AL     A+ AE+VR  ++A
Sbjct: 61  TSIFVQL---FWIYFVLPM-------TGAELTP-MQAGVMALGLNVGAYGAEVVRGAILA 109

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPR Q EA +A+ LT  +  R ++LPQA+  ++P   +  + LLK +S+   +  +D+  
Sbjct: 110 VPRDQHEACVAVNLTRFQRMRHIILPQALPLMLPTFGNNAIELLKATSVVSLISLSDMTF 169

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               + +QTG  +   +  + +Y ++S  ++  M RL  ++   
Sbjct: 170 QAQVVRSQTGSTLMPFVTILLLYFAMSSALSFGMRRLERRVTRG 213



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 37/88 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL+G   T  L   G   A ++  + G GR+S +  V W+   Y+E FR     V 
Sbjct: 7   YLTLILMGAWVTVKLTLMGSALALVVAFVAGLGRISRHAAVRWLATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +F++Y  +                + LN
Sbjct: 67  LFWIYFVLPMTGAELTPMQAGVMALGLN 94


>gi|94309636|ref|YP_582846.1| amino acid ABC transporter permease [Cupriavidus metallidurans
           CH34]
 gi|93353488|gb|ABF07577.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 231

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 21/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------ 211
           +P  ++ +      +   +S   +++  +   F  S  L IV++L               
Sbjct: 1   MPTFNLSMLLSGQYHEWLVSGFVMSLKLSVIAFAISLPLAIVIALLRLAPLAPLRGLGQA 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + +  + +PLL    F  FG P L+  A+K  L+                 + E +S  I
Sbjct: 61  YVEAIRNVPLLAHMLFWYFGAPQLLPFAIKSWLY---------------EHNYEAVSALI 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YT A++AE +RSG+ ++P+ Q+EA+ ALG +   + RLV+LPQ++R  +PPL +Q 
Sbjct: 106 ALVLYTTAYMAEDIRSGIRSIPKEQLEASRALGFSFLASMRLVVLPQSLRITVPPLVNQI 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL KNSS+A+ +G A+L+     + + T +  E        YL++S+ I LF      +
Sbjct: 166 LNLWKNSSIAMVIGVAELMYQAQQVESATFRGFESFAFATLAYLTISMTITLFSLWYQHR 225

Query: 392 IALK 395
             ++
Sbjct: 226 FPVR 229



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GFV +  L+      +  +  ++   RL+    +  + + YVE  RN+P 
Sbjct: 11  SGQYHEWLVSGFVMSLKLSVIAFAISLPLAIVIALLRLAPLAPLRGLGQAYVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVL 165
           L  + F Y     +LP    S + 
Sbjct: 71  LAHMLFWYFGAPQLLPFAIKSWLY 94


>gi|156973842|ref|YP_001444749.1| ABC transporter permease [Vibrio harveyi ATCC BAA-1116]
 gi|156525436|gb|ABU70522.1| hypothetical protein VIBHAR_01552 [Vibrio harveyi ATCC BAA-1116]
          Length = 225

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   + V+G+ +S+    ++R+            +I  F   G P L
Sbjct: 10  FPVYLDGLWTTVWLVALALVIGLCVSIPL-AIARNSTNYALSLPSWAFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF+ +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFSPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  +   DL      
Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFIILWCFKMAEKRF 217



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++    +   +   R S N  ++     ++  FR  P LV ++ 
Sbjct: 12  VYLDGLWTTVWLVALALVIGLCVSIPLAIARNSTNYALSLPSWAFIYFFRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFG 168
           +Y  +    P+ D      + 
Sbjct: 72  IYYGMDQFSPVKDTLWENAWF 92


>gi|154244133|ref|YP_001415091.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154158218|gb|ABS65434.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 217

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 12/192 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L+R    +  + L   YI             +     L     +      I G    P 
Sbjct: 38  ALARISSTRWVRILATAYI------------QVVQGTPLLILLFLFYFGIAIAGFKEVPA 85

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            ++  + L+ Y++ F+AEI R  + +VP+ Q EAA  L L+  +    V+LPQAMR    
Sbjct: 86  ILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRLTRVILPQAMRIATA 145

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P     + ++KN+SLA  VGF +L   G  + N   +   I ++   IY  L   ++ + 
Sbjct: 146 PTVGFLVQIVKNTSLASVVGFVELSQAGKLVNNSIFEPFTIFMVVAAIYFVLCYPLSTWS 205

Query: 386 NRLNAKIALKEK 397
             L  K+ +  +
Sbjct: 206 RSLERKLNVGRR 217


>gi|116627889|ref|YP_820508.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101166|gb|ABJ66312.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 232

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 11/203 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + + ++ ++L L    +S   H K  + +  +Y+  F     P LV   + +    
Sbjct: 34  LGISIGALIVALLLGLIFGAMS-STHNKVLRGISRVYVEIF--QNTPLLVQFVVVFYGIS 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G+ + P  ++  + +  YT A+I+EI+R+G+ A+P+GQ EAA++ G T
Sbjct: 91  IL--------TDGNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAIPKGQTEAALSQGFT 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +    R+++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++         T   +  
Sbjct: 143 YADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
                F+Y  +   +A +  R  
Sbjct: 203 FAGAAFLYFIMCFPLATWARRKE 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV    +
Sbjct: 26  FAKGFLYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVV 85

Query: 149 YKSV 152
           +  +
Sbjct: 86  FYGI 89


>gi|256380966|ref|YP_003104626.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255925269|gb|ACU40780.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 278

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 22/215 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  F    V G+VL+L      +       + +  +YI  F       LV +AL      
Sbjct: 66  ALGFAVGLVAGLVLALM-----KLSSVGPYRWIATIYIEFFR-GVPALLVFVAL----SV 115

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+     F   ST         IAL    AA+IAE +R+G+ AVP+GQ+EAA +LG++
Sbjct: 116 AVPLAFGLKFDIYST-------AAIALGVVGAAYIAETIRAGIKAVPKGQLEAARSLGMS 168

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
             + T  V++PQA R I+PPLT++ + L K+SSL   +G      +L   G  +++Q+  
Sbjct: 169 QGRTTVTVVIPQAFRIILPPLTNELIMLTKDSSLISIIGLIATQRELTKYGREVLSQS-P 227

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +LI    YL +++ +      +  + A   +
Sbjct: 228 TVTPLLIAGLCYLIITLPLGYLSRWMETRGAGGSR 262



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 30/77 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I    VNT      G     + G ++   +LS+     WI  +Y+E FR +P L+V   
Sbjct: 53  VITTALVNTVVYTALGFAVGLVAGLVLALMKLSSVGPYRWIATIYIEFFRGVPALLVFVA 112

Query: 148 LYKSVLSVLPIPDHSIV 164
           L  +V     +      
Sbjct: 113 LSVAVPLAFGLKFDIYS 129


>gi|123441155|ref|YP_001005143.1| ABC transporter, inner-membrane component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088116|emb|CAL10904.1| ABC transporter, inner-membrane component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 219

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 18/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +     T        V  F +G+V+ L         H + G+    +YIS F   
Sbjct: 11  WLPMLIDGAVTTASLCIVAIVAGFFIGVVIYLME-----SGHSRLGRGFARIYISLF--R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L  + L + L  +                P +++  +AL+  TAA+ ++I+RSG  
Sbjct: 64  GTPVLAQVLLCFYLPGEL-----------GLSLPGYLAAVLALTLNTAAYQSQILRSGFN 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EAA   GL+ R+A   + +PQ +R  +P L S+ ++++K S++   +   DL+
Sbjct: 113 AIPPGQLEAAAMCGLSPRQALWHIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLM 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            VG  + + T + +E+ +     YL L+ ++AL  N +  +   + +
Sbjct: 173 RVGQQLASATYRPLEVYIAIALSYLVLTSLLALLGNYVERRWHKESR 219



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S+   ++ G V T  L    ++    IG ++       ++L     R+Y+ +FR 
Sbjct: 5   FQLLRSWLPMLIDGAVTTASLCIVAIVAGFFIGVVIYLMESGHSRLGRGFARIYISLFRG 64

Query: 139 IPPLVVIFFLYK 150
            P L  +   + 
Sbjct: 65  TPVLAQVLLCFY 76


>gi|294676009|ref|YP_003576624.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294474829|gb|ADE84217.1| amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 262

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 10/193 (5%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R    F+ +  + +P++ +  ++ F    LV   +        P L   +F      
Sbjct: 74  LIWRQLARFYTEVIRGVPIIVLLLYVAFA---LVPALVAGWNALGLPELSVRDF------ 124

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P      +AL    AAF+AE+ R+GLI+V RGQ+EAA ALGL      RL++ PQA R+
Sbjct: 125 -PLLARAVLALILAYAAFLAEVFRAGLISVERGQIEAAKALGLGGWLRFRLIVFPQAFRT 183

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PPL + ++ ++K+SSL   +G AD+  +G        +  E   +   IYL++++ ++
Sbjct: 184 VLPPLGNDFVAMVKDSSLVSVLGVADITQLGKVTAAGNFRYFETYNVVALIYLAMTVTLS 243

Query: 383 LFMNRLNAKIALK 395
           L + +L A +  +
Sbjct: 244 LLLRKLEAHLRKR 256


>gi|15893668|ref|NP_347017.1| amino acid ABC transporter permease [Clostridium acetobutylicum
           ATCC 824]
 gi|15023226|gb|AAK78357.1|AE007552_7 Amino acid (glutamine) ABC transporter, permease component
           [Clostridium acetobutylicum ATCC 824]
          Length = 216

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+   + + G +++L    L +    K   A+   Y  T++  G P L+ +   Y  
Sbjct: 19  VTIKLTFMAIIFGCIIALLVAIL-KVSANKFLNAVGGFY--TWIFRGTPLLLQL---YVF 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  P L                +  + LS  + A+IAEI+R G+IA+ +GQ EA+ ALG
Sbjct: 73  YYGLPALN--------INISATQAAILGLSLNSGAYIAEIIRGGIIAIDKGQFEASKALG 124

Query: 305 LTHRKATRLVLLPQAMRSII-PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
                      +   +  +I PP+ ++++ L+K++SL   +   +L+     +++ +G A
Sbjct: 125 FPEGPTNEEGYICLKLLEVINPPMGNEFIALIKDTSLVSVITMEELLRKAQLLVSSSGDA 184

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   +I    YL L+ +     +R+  K++L 
Sbjct: 185 VTPYVITGVFYLVLTTVFTFLFSRIEKKLSLY 216



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +       +L G + T  L F  +I   II  LV   ++SANK +  +   Y  +F
Sbjct: 1   MDFNTLDKVIPVLLRGTLVTIKLTFMAIIFGCIIALLVAILKVSANKFLNAVGGFYTWIF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           R  P L+ ++  Y  + ++      +     G+ LN+       +     A 
Sbjct: 61  RGTPLLLQLYVFYYGLPALNINISATQAAILGLSLNSGAYIAEIIRGGIIAI 112


>gi|148988974|ref|ZP_01820374.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|182683539|ref|YP_001835286.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|303253933|ref|ZP_07340054.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|147925471|gb|EDK76548.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|182628873|gb|ACB89821.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|301801477|emb|CBW34169.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae INV200]
 gi|302599109|gb|EFL66134.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
          Length = 225

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL+ LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|125974764|ref|YP_001038674.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum ATCC 27405]
 gi|256005224|ref|ZP_05430191.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 2360]
 gi|281418767|ref|ZP_06249786.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum JW20]
 gi|125714989|gb|ABN53481.1| amino acid ABC transporter membrane protein, PAAT family
           [Clostridium thermocellum ATCC 27405]
 gi|255990775|gb|EEU00890.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 2360]
 gi|281407851|gb|EFB38110.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum JW20]
 gi|316941898|gb|ADU75932.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 1313]
          Length = 236

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 91/185 (49%), Gaps = 12/185 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +   A+   Y+  F   G P +V + + Y +                          +  
Sbjct: 63  RILNAICDFYVGLF--RGTPVVVQLLVAYYVVLPL----------LGINLSALTVCVLVF 110

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              + A+++EI+RSG+++V  GQMEA  ALGL++R     +++PQA+++I+P L ++++ 
Sbjct: 111 GLNSGAYVSEIMRSGIMSVDHGQMEAGRALGLSYRVTMLKIVIPQAVKNILPTLGNEFIA 170

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+K +S+   VG ADL      I   + + +   L    IY++L ++IA  +  +  ++ 
Sbjct: 171 LIKETSVVSFVGAADLYVAFSYIGTNSYEFMVPYLAMALIYIALVMIIASLIKVMERRLR 230

Query: 394 LKEKK 398
             +++
Sbjct: 231 KSDRR 235


>gi|49082214|gb|AAT50507.1| PA1341 [synthetic construct]
          Length = 249

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 5/225 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   L +    +     I +  +++ + L      + R    +    +   Y+  F    
Sbjct: 18  SETYLDWCIAGLGWTIAIALVGWIIALALGSLLGVM-RTVPNRLVSGIATAYVEIF--RN 74

Query: 232 LPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           +P LV + + Y L  D     L  +     +  +  ++S+ + L  +TAA + E VR+G+
Sbjct: 75  VPLLVQLFIWYFLVPDLLPEGLQTWFKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGI 134

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ  AA A+G    +  R VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L
Sbjct: 135 QALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMEL 194

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++        +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 195 LAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIMRLVERKVAV 239



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A  G I A  +G+L+G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWCIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATAYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP    +     
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQTWFKQD 103


>gi|327462432|gb|EGF08757.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 286

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 108/261 (41%), Gaps = 11/261 (4%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +VV  +L  +      +        F +      +      +     + V   V GI+L
Sbjct: 17  IIVVTTYLLTTGWYEDFLKIIPDGKLFSLRAVFEAIPGILQNLPITLLLTVGGAVFGIML 76

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFN 255
           +     + +    K    +   ++S   + G P LV + L Y   F  P+L      Q+ 
Sbjct: 77  A-MVFAVVKINRVKVLYPIQAFFVSF--LRGTPLLVQLMLTY---FGIPLLLKAINQQYG 130

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                   P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+++    V+
Sbjct: 131 TSFNINDIPASVFAIVAFAFNEAAYASETIRAAILSVDLGEIEAARSLGMTNKQVYMRVI 190

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +P A     P L +  + L K +SLA + G  ++ +    I     +  E  +    IY 
Sbjct: 191 IPNAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYW 250

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           +++I+I      +   + +K+
Sbjct: 251 AVNILIEQLGRWIEKMMDIKQ 271


>gi|297160231|gb|ADI09943.1| amino acid ABC transporter transmembrane protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 216

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 18/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   V SF LG+V +L     +R         +         I   P LV +   Y +  
Sbjct: 27  ALGSVLSFALGLVWALAFRSPTRFVRWPVAAVV-------EFIRNTPLLVQLFFFYYV-- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IAL  + + + AE+ R+G+  VP+GQ EA  AL L+
Sbjct: 78  ---------LPTWDIKFSALTTGVIALGLHYSTYTAEVYRAGIDGVPKGQWEACTALSLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA+R ++P L +  + +LK+S +   +G  D++         + + IE 
Sbjct: 129 RGRTWIAVILPQAIRRVVPALGNYVIAMLKDSPMLALIGVVDMLQKARAHGATSFEYIEP 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    ++ ++   +L M  L  ++ 
Sbjct: 189 YTMVGIAFILIAYPASLLMRALERRLG 215



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +     +   +  G + T      G + +  +G +      S  + V W     VE  R
Sbjct: 4   DWDVAKDFLPELGDGLLITLEATALGSVLSFALGLVWALAFRSPTRFVRWPVAAVVEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH 161
           N P LV +FF Y  + +       
Sbjct: 64  NTPLLVQLFFFYYVLPTWDIKFSA 87


>gi|170703222|ref|ZP_02894026.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|172060112|ref|YP_001807764.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|170131872|gb|EDT00396.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171992629|gb|ACB63548.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 229

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLAAAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLVGWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      ILI   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILIAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLAAAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|126665671|ref|ZP_01736652.1| ABC-type arginine transport system, permease component
           [Marinobacter sp. ELB17]
 gi|126629605|gb|EBA00222.1| ABC-type arginine transport system, permease component
           [Marinobacter sp. ELB17]
          Length = 234

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 12/226 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                LS   +TM+        S +LG+V +      ++    +  +A+   Y  T  I 
Sbjct: 7   YGPELLSGAIVTMELAFLSLAVSLILGLVGA-----SAKLSDNRPLRAIATTY--TTCIR 59

Query: 231 GLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           G+P +V++ L Y      ++    VL +   I        F+S  + +     A++ E  
Sbjct: 60  GVPDIVMMMLFYYGGQLAVNSLSDVLWEAYEIDFFFQFDPFISGVVTIGLIFGAYMTETF 119

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +AV  GQ+EAA A G +     R ++ PQ +R  +P + + +  LLK ++L   +G
Sbjct: 120 RGAFLAVDTGQIEAARAYGFSRWHTFRRIIFPQMLRHALPGIGNNWQVLLKTTALVSIIG 179

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             D+V V               +   F+YLSL+ +  LF+  L+ +
Sbjct: 180 LTDMVRVAEEAAKAERMPFHFFIPVAFVYLSLTAVSELFIKWLDIR 225


>gi|206559442|ref|YP_002230203.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|198035480|emb|CAR51358.1| histidine transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 229

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLVGWNQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GAAYGMSGARVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|301793799|emb|CBW36190.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae INV104]
          Length = 225

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILAHIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCMGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQ  R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQTFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  +  ++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|271501283|ref|YP_003334308.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344838|gb|ACZ77603.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 238

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 98/224 (43%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-VLSLFATRLSRHFHEKTGKALPLLYISTF 227
           +    + L +      T   + ++  ++ + +  L A  L+        +    +++ T+
Sbjct: 5   LQQYWQALLWSDGYRLTGLAMTLWLLIISVTIGGLMAVPLAVARVSPRRRYWLPVWVFTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLVFYSGVYSLEIVRGTDLL-NAFFRSGLNCAILALALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA  V   
Sbjct: 124 AIRSVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNEVILMLHSTALAFTVTVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+ V   I   T Q      I   +YL++S ++     +   +
Sbjct: 184 DLLKVARDINAATYQPFYAFGIAGAMYLAISFVLIALFRKAERR 227


>gi|320154861|ref|YP_004187240.1| putative amino acid ABC transporter permease [Vibrio vulnificus
           MO6-24/O]
 gi|319930173|gb|ADV85037.1| putative amino acid ABC transporter permease protein [Vibrio
           vulnificus MO6-24/O]
          Length = 238

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 29/245 (11%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------ 209
                       G+      ++    T+  +    +F+  LG++++L A    +      
Sbjct: 14  WGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLN 73

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + +  +A+P+L +  ++ +GLPTL+ ++L                         + + 
Sbjct: 74  RIYVEVIRAIPVLVLLLWVYYGLPTLLDVSL-----------------------DHYWAG 110

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL+   +AF+AE+ R G+ ++ RGQ EAA +LGL + +  RLV+LPQA R ++P L +
Sbjct: 111 IIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSLGLNYWQKMRLVILPQAFRQMLPALGN 170

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++ +LK SSL   +G +DL      ++      +EI    +  YL L +M++  +  L 
Sbjct: 171 QFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILMVSQAVRWLE 230

Query: 390 AKIAL 394
            + A+
Sbjct: 231 KRSAI 235



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    ++ GF +T  ++   M+ A  +G +V    LS  K +  + R+YVEV R IP LV
Sbjct: 28  TNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLV 87

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 88  LLLWVYYGLP 97


>gi|330832442|ref|YP_004401267.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|329306665|gb|AEB81081.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 232

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                      +              I V +F++ + L +    LS     K  K +  +
Sbjct: 8   PYAWENWVSYFKDFPTFFQGFLFTLAISVGAFIMAMFLGIVFGSLS-SSKNKVLKIIARV 66

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+        P LV   + Y   +  P++  +  +        + +  I +  Y  A+IA
Sbjct: 67  YVE--YYQNTPLLVQFMIVY---YGLPLISNYVLMPSI-----YWTAVICVGLYHGAYIA 116

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++R+G+ AVP GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q +NL+KN++   
Sbjct: 117 EVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVA 176

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +  AD++ +  +        I       F+Y  +   +A +  R+  K
Sbjct: 177 IISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEEK 225



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++    I A  +G + G+   S NK++  I RVYVE ++N P LV    +
Sbjct: 24  FFQGFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIV 83

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y  +  +        +  
Sbjct: 84  YYGLPLISNYVLMPSIYW 101


>gi|224369139|ref|YP_002603303.1| GlnP5 [Desulfobacterium autotrophicum HRM2]
 gi|223691856|gb|ACN15139.1| GlnP5 [Desulfobacterium autotrophicum HRM2]
          Length = 226

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 106/230 (46%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L           K+   + ++GI++ L    L R +  K  +     Y+
Sbjct: 1   MNEFLAYAAMALPEMLQGTVITLKLTAGALLIGILIGLPL-SLVRVYGGKLLQPFCSAYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F   G P LV + + Y   +  P L                + ++ L C +AA+  E 
Sbjct: 60  TLF--RGTPLLVQLFVVY---YGLPEL--------GISFSRMTAAFLTLGCNSAAYQCEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  + AV +GQM AA  +G++  +  R ++LPQA+R +IP  +++++ ++K +++   +
Sbjct: 107 FRGAIQAVSKGQMRAARGIGMSKLQGIRHIILPQALRLVIPAWSNEFIAMVKYTAIVFLI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              DL+S    + +Q    I+  ++   IYL L   ++L ++ +  ++A+
Sbjct: 167 AVPDLMSRAKILSSQNFAPIQTYILVALIYLVLVGTLSLGLHFVQQRLAV 216



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  L    ++   +IG  +   R+   KL+   C  Y+ +FR  P LV +F +
Sbjct: 15  MLQGTVITLKLTAGALLIGILIGLPLSLVRVYGGKLLQPFCSAYLTLFRGTPLLVQLFVV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +             +  N+             A
Sbjct: 75  YYGLPELGISFSRMTAAFLTLGCNSAAYQCEYFRGAIQA 113


>gi|116493034|ref|YP_804769.1| ABC-type amino acid transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116103184|gb|ABJ68327.1| amino acid ABC transporter membrane protein, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 216

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 19/232 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + +   +    LS  ++T+       V S +LG+ L+L      + F         +
Sbjct: 1   MFNINYISEIIPSLLSGASMTLQVFCWTIVGSLILGVFLALGLVSKFKPFQ-------AI 53

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +    +L+ G P L+ +   +                   V P + +  +A     AA+ 
Sbjct: 54  ISAYVWLMRGTPLLLQLIFIFY-----------GLPTVGIVFPRYEAALLAFILNYAAYF 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R GL +V +GQ EA   L +T+ + T+ V+LPQ  + ++P + ++ +NL+K+SSL 
Sbjct: 103 AEIFRGGLQSVDKGQYEAGRVLQMTYWQTTKKVILPQVAKIVLPSIGNEVINLVKDSSLV 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G  DL+  G     +    +   ++   +YL L+ +    + ++    +
Sbjct: 163 YVIGIGDLLRAGNVAAARD-VTLVPFILVGIMYLILTGICTFLLRKVEKHYS 213



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 35/99 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ + I+G  +  G +S  K    I   YV + R  P L+ + F+
Sbjct: 14  LLSGASMTLQVFCWTIVGSLILGVFLALGLVSKFKPFQAIISAYVWLMRGTPLLLQLIFI 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  + +V  +            LN              +
Sbjct: 74  FYGLPTVGIVFPRYEAALLAFILNYAAYFAEIFRGGLQS 112


>gi|116495483|ref|YP_807217.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|191638946|ref|YP_001988112.1| Glutamine ABC transporter permease [Lactobacillus casei BL23]
 gi|227534090|ref|ZP_03964139.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239629875|ref|ZP_04672906.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|116105633|gb|ABJ70775.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|190713248|emb|CAQ67254.1| Glutamine ABC transporter permease [Lactobacillus casei BL23]
 gi|227188271|gb|EEI68338.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239527487|gb|EEQ66488.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382994|gb|AEA54470.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei LC2W]
 gi|327386182|gb|AEA57656.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei BD-II]
          Length = 214

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 10/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T  +     + S +L ++ SL    L         K+L ++      I  
Sbjct: 1   MWSILTNNWGTFMSGVGYTLASSILALIGSLIVGTLFALLEISPFKSLRVIGRIYVEIVR 60

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              L++I L + +     ++ QF           F +  I L  YT+AFIAE VR+G+ A
Sbjct: 61  NIPLLVITLAFYV-----IVPQF-----IVKIDGFTAGTIGLLIYTSAFIAETVRAGIEA 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQME A ++G+T+ +A   ++ PQA + +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 VPGGQMEGARSIGMTYNQAMIQIIFPQAFKMVIPPLGNQFINLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  I   T    +  LI    YL L++ ++  M  L  K
Sbjct: 171 QGKLIAATTFSTFDTYLIVGVFYLVLTMPLSYLMRYLEKK 210



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               + G   T   +   +I + I+GTL     +S  K +  I R+YVE+ RNIP LV+ 
Sbjct: 9   WGTFMSGVGYTLASSILALIGSLIVGTLFALLEISPFKSLRVIGRIYVEIVRNIPLLVIT 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              Y  V   +   D       G+ +        T+     A
Sbjct: 69  LAFYVIVPQFIVKIDGFTAGTIGLLIYTSAFIAETVRAGIEA 110


>gi|288961594|ref|YP_003451904.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913874|dbj|BAI75360.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 284

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 14/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I + S  L IV+ + AT   R         +   Y S F   G P +V +      
Sbjct: 85  LTLLICLLSIALSIVIGVLATA-GRLSTNPVAYGVATFYGSFF--RGTPLMVQLL----- 136

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L          V        +ALS    A+++EI R+G+ +V  GQ EAA+ALG
Sbjct: 137 ------LLYLGLPQLGPVPAALPCGVLALSLNYGAYLSEIFRAGVQSVAPGQREAAMALG 190

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +    V+LPQA R +IPP  +Q++ +LK+SSL    G  ++  +  +    + + +
Sbjct: 191 LSRGQIAWTVILPQATRFVIPPTGAQFVAMLKDSSLVSVTGLWEINFLAQSYGRSSYRYV 250

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E++L    +Y  LS++     +RL  +     ++
Sbjct: 251 EMLLTAAVVYWMLSLIFEHVQSRLEVRYGRAYQR 284



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 5/161 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  +    +  + +IG L  AGRLS N +   +   Y   FR  P +V +  L
Sbjct: 79  FLQGAALTLLICLLSIALSIVIGVLATAGRLSTNPVAYGVATFYGSFFRGTPLMVQLLLL 138

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV---FSFVLGIVLSLFAT 205
           Y  +  + P+P         + LN              +        +  LG  LS    
Sbjct: 139 YLGLPQLGPVPAALPCGVLALSLNYGAYLSEIFRAGVQSVAPGQREAAMALG--LSRGQI 196

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +    + T   +P        +    +LV +   ++++F
Sbjct: 197 AWTVILPQATRFVIPPTGAQFVAMLKDSSLVSVTGLWEINF 237


>gi|260588159|ref|ZP_05854072.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Blautia hansenii DSM 20583]
 gi|331082275|ref|ZP_08331402.1| hypothetical protein HMPREF0992_00326 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260541686|gb|EEX22255.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Blautia hansenii DSM 20583]
 gi|330403069|gb|EGG82634.1| hypothetical protein HMPREF0992_00326 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 236

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + +     T+       +   ++G +++            +    +   Y++ F   G
Sbjct: 21  YVKVIEGLQNTLMIAIVGLIVGILIGTLIATVRVLPKYKRLPRILNGICSFYVALF--RG 78

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V + + Y +            I G   S E +++ +     + A+I+EI+RSG+ +
Sbjct: 79  TPMVVQLLVFYYVLLP---------IMGIRTSGEVVAMAV-FGLNSGAYISEIMRSGIQS 128

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ+EA  A+GL+   +   +++PQA+++I+P L +++++L+K +S+   VG ADL  
Sbjct: 129 VDAGQLEAGRAVGLSFSVSMVKIVIPQAVKNILPTLGNEFISLIKETSIVSFVGAADLYV 188

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I + + + +   L+   IY+ L ++I+L +  L   +   +++
Sbjct: 189 AFSYIGSNSYEFMVPYLVMALIYIVLVLIISLLVKLLERSLKKSDRR 235



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 6/104 (5%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVA 126
           I++ +  +   + Y   I  G  NT  +A  G+I   +IGTL+   R+        +++ 
Sbjct: 8   INKFMEIFLEQNGYVKVI-EGLQNTLMIAIVGLIVGILIGTLIATVRVLPKYKRLPRILN 66

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            IC  YV +FR  P +V +   Y  +L ++ I     V+   +F
Sbjct: 67  GICSFYVALFRGTPMVVQLLVFYYVLLPIMGIRTSGEVVAMAVF 110


>gi|209549651|ref|YP_002281568.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209535407|gb|ACI55342.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 276

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 7/215 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               +   S + G VLSL     +R    +   AL   YI  F   G P L  + L Y  
Sbjct: 68  VTLSLVFISVICGAVLSLPLAA-ARMSKNRVLNALAYGYIYFF--RGTPLLAQLFLVYYG 124

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L   +P L              +     A++  TAA+ AEI+R  + +VP GQ EAA AL
Sbjct: 125 LGVFRPQLEAVGIWW--FFREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHEAAAAL 182

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+    A R ++LPQA+   + P  ++ + L+K S++   +   DL+       ++T   
Sbjct: 183 GIHKFIAFRKIVLPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFDY 242

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  L     YL +   +      +  ++    K+
Sbjct: 243 -QTYLWAAIFYLVIVEALRHLWAWIERRLTRHLKR 276



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 37/96 (38%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L F  +I   ++   + A R+S N+++  +   Y+  FR  P L 
Sbjct: 57  RYGPRYLHGLGVTLSLVFISVICGAVLSLPLAAARMSKNRVLNALAYGYIYFFRGTPLLA 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            +F +Y  +    P  +   +  F       GL   
Sbjct: 117 QLFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLFAM 152


>gi|260904822|ref|ZP_05913144.1| polar amino acid ABC transporter, inner membrane subunit
           [Brevibacterium linens BL2]
          Length = 245

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 17/204 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S ++ I L+L      R  + +  + L  LYI  F     P LV +   + +++
Sbjct: 29  VIVIVLSMIIAIPLALL-----RMSNIEVVRWLAQLYIEIF--RCTPLLVQL---FWVYY 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L            P  +S  IAL+    AF+AE  RSG  +VP  Q+EA   L LT
Sbjct: 79  ALPTLTGITI-------PGTISAIIALTLNLTAFMAEAYRSGFQSVPPEQVEAGKMLRLT 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +++PQA++  +P + S  +++ K+++L   +  ADL+     I  ++ +A+EI
Sbjct: 132 RFQQIRHIIVPQALKQQLPVIMSLNISIFKDTALVSTIAVADLMFTANKISTESYRALEI 191

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
           + +   +Y  ++   +L ++++  
Sbjct: 192 LTVAALMYFIIAFPASLILSKIER 215



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 39/65 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + II   +   R+S  ++V W+ ++Y+E+FR  P LV +F++
Sbjct: 17  LLEGLLLTVEIAVIVIVLSMIIAIPLALLRMSNIEVVRWLAQLYIEIFRCTPLLVQLFWV 76

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 77  YYALP 81


>gi|15835727|ref|NP_300251.1| ABC amino acid transporter permease [Chlamydophila pneumoniae J138]
 gi|8978565|dbj|BAA98402.1| ABC amino acid transporter permease [Chlamydophila pneumoniae J138]
          Length = 217

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 15/227 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + +    L     T+  +    +   +LG+++       S +F  K  K L   Y+
Sbjct: 1   MDHWLAIARLLLRGCGYTLCVSGIGILCGSILGLLIGTVT---SLYFPSKLTKLLANSYV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P  + I + Y   F  P +               ++  IALS  +AA++AE 
Sbjct: 58  T--VIRGTPLFIQILIIY---FGLPEVLPIE-------PTPLVAGIIALSMNSAAYLAEN 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ ++  GQ E+A+ LG    +    ++ PQ  ++I+P LT+++++L+K SS+ + V
Sbjct: 106 IRGGINSLSIGQWESAMVLGYKKYQIFVYIIYPQVFKNILPSLTNEFVSLIKESSILMVV 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  +L  V   I+++    +E+ LI   +Y  ++   +        +
Sbjct: 166 GVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTSSFSCISRLSEKR 212



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGA--GRLSANKLVAWICRVYVEVFRNIPPL 142
            A  +L G   T  ++  G++  +I+G L+G        +KL   +   YV V R  P  
Sbjct: 7   IARLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLF 66

Query: 143 VVIFFLYKSVLSVLP 157
           + I  +Y  +  VLP
Sbjct: 67  IQILIIYFGLPEVLP 81


>gi|253990334|ref|YP_003041690.1| arginine permease ArtQ [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781784|emb|CAQ84947.1| arginine transport system permease protein artq [Photorhabdus
           asymbiotica]
          Length = 238

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 104/220 (47%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPT-LVL 237
                 V   +L ++ + + +   + F           + LP + +  F+  G+   L++
Sbjct: 17  LAISALVLGLILAMIFAAWESARWKPFAALGTCWVTLFRGLPEILVVLFVYSGVSQFLIM 76

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +A  + ++           I   +V+P F+   IALS   +A+ ++ +R  + A+P GQ 
Sbjct: 77  LADGFDVYLIFWHPRIQIDIQDFSVNP-FLCGVIALSLLYSAYASQTLRGAIKAIPAGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA +ALGL   +    +++PQ  R  +P L++Q+L LLK+++L   +   DL+    +I 
Sbjct: 136 EAGLALGLGRAEIFFRLIMPQMWRHALPGLSNQWLVLLKDTALVSLISVNDLMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     +I   IYL+++++    + ++       ++
Sbjct: 196 TRTQEPFTWYMIVALIYLAITLISQFILKKIEMHTTRFDR 235


>gi|139439418|ref|ZP_01772859.1| Hypothetical protein COLAER_01879 [Collinsella aerofaciens ATCC
           25986]
 gi|133775197|gb|EBA39017.1| Hypothetical protein COLAER_01879 [Collinsella aerofaciens ATCC
           25986]
          Length = 248

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +  +A+  +Y+  +    LP  V +   Y        L              F+  ++
Sbjct: 53  RSRVLRAISRVYVEFYQNTPLP--VQVLFMYMA--GPQFLQAMTGADQPVRIAPFVLGFL 108

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y AA+I+E++R+G+ AVPRGQMEAA + G T  +A   ++LPQ  + I+PPL +Q 
Sbjct: 109 GVGLYHAAYISEVIRTGIEAVPRGQMEAAQSQGFTRAQAYWYIVLPQTFKIILPPLCNQA 168

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL+KN+S+   V   DL+      ++  G  ++  ++   +Y  +   +A+ +  L  +
Sbjct: 169 LNLVKNTSVLALVAGGDLMYRSDNFVSLYG-YLQGYIVCCLMYFIICFPLAMLVQWLERR 227

Query: 392 IALKEK 397
              + +
Sbjct: 228 SKERPR 233


>gi|323498049|ref|ZP_08103056.1| ABC transporter permease [Vibrio sinaloensis DSM 21326]
 gi|323316897|gb|EGA69901.1| ABC transporter permease [Vibrio sinaloensis DSM 21326]
          Length = 225

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 94/220 (42%), Gaps = 9/220 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     + T   +   + ++G+++++    ++R+            +I  F   G 
Sbjct: 7   FESFPVYLEGLWTTVWLVSLALIIGLLVAVPLG-VARNSQNYFIMGPSWAFIYFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +
Sbjct: 64  PLLVQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGL 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G++EAA A G+++    R ++LP A+R  +P  +++ + +L  S++A  V   DL   
Sbjct: 118 PKGEVEAAKAYGMSNFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGA 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              + ++     E  L     Y++L+ +I         + 
Sbjct: 178 ARLVNSRYYAPFESFLTAGLFYMALTFIILWCFKHAEKRF 217



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 31/81 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    +I   ++   +G  R S N  +      ++  FR  P LV ++ 
Sbjct: 12  VYLEGLWTTVWLVSLALIIGLLVAVPLGVARNSQNYFIMGPSWAFIYFFRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFG 168
           +Y  +    P+ D      + 
Sbjct: 72  IYYGMDQFFPVKDTLWENAWF 92


>gi|313890203|ref|ZP_07823838.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121564|gb|EFR44668.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 220

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 14/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F    +     I   SF+ GI L +    L R  H   G    ++ +   ++ G+P +
Sbjct: 13  LWFVLSGLPYTIGISALSFLTGISLGVLLAILGRSRH---GFFRRIVKVYVSIMRGVPMI 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++   + L+F  P              P  +  YI  S  ++A+I+EI RS + AV  G
Sbjct: 70  VVL---FMLYFGMPYFNL--------QLPALLCAYIGFSLVSSAYISEIFRSSINAVALG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALGL  ++  + V+LPQA+R  IPPL +  ++++K+SSLA  +   D+      
Sbjct: 119 QWEAAKALGLPQKRVIKKVILPQAIRIAIPPLGNVVIDMIKSSSLAAMITVPDIFQNAKI 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +    + + ++  FIY SL  +   F   L  K+ L
Sbjct: 179 VGGREWDYMSMYILVAFIYWSLCYLFENFQAYLEHKLQL 217



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            + +         +L G   T  ++    +    +G L+     S +     I +VYV +
Sbjct: 3   FIDFQLMKDSLWFVLSGLPYTIGISALSFLTGISLGVLLAILGRSRHGFFRRIVKVYVSI 62

Query: 136 FRNIPPLVVIFFLYKSVL 153
            R +P +VV+F LY  + 
Sbjct: 63  MRGVPMIVVLFMLYFGMP 80


>gi|326388277|ref|ZP_08209880.1| polar amino acid ABC transporter, inner membrane subunit
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207443|gb|EGD58257.1| polar amino acid ABC transporter, inner membrane subunit
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 242

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 5/209 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +FV S +   +L       +        + +   +I  FL  G P L+ I + Y 
Sbjct: 25  PVTLGLFVASAIGASLLGGGLVA-ALTAGLAPVRGIARGWI--FLFRGTPLLLQIFMVYY 81

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  + Q  F              +A++C  +A+IAE++R  L A+P GQ+EAA+A 
Sbjct: 82  GLAALGPVRQGPFWPA--FRDPLFCAGLAMTCCCSAYIAEVLRGALAAIPAGQIEAALAC 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      RL++LPQ +R  +P   ++ + ++K++SLA  +   D+  V   +I  + + 
Sbjct: 140 GMGRVTRLRLIVLPQMLRLALPAYGNELVMMVKSTSLASTITVLDVTGVAQQVIAHSYRT 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +++  +   +YL L+  +   +     ++
Sbjct: 200 LDVFCLAAGVYLGLTGALTALLRWAERRL 228



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 5/141 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A AI+     T  L  +  I A+++G  + A   +    V  I R ++ +FR  P L+ I
Sbjct: 17  ALAIVRAVPVTLGLFVASAIGASLLGGGLVAALTAGLAPVRGIARGWIFLFRGTPLLLQI 76

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           F +Y  + ++ P+        F        L    L M      ++   + G + ++ A 
Sbjct: 77  FMVYYGLAALGPVRQGPFWPAF-----RDPLFCAGLAMTCCCSAYIAEVLRGALAAIPAG 131

Query: 206 RLSRHFHEKTGKALPLLYIST 226
           ++        G+   L  I  
Sbjct: 132 QIEAALACGMGRVTRLRLIVL 152


>gi|167908583|ref|ZP_02495788.1| amino acid ABC transporter, permease/ATP-binding protein
           [Burkholderia pseudomallei NCTC 13177]
          Length = 340

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 59  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 118

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGS 260
           L     S          + L      ++  L    L  L   +    P     F  +  +
Sbjct: 119 LARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFAEVATT 178

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAM
Sbjct: 179 DLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAM 238

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 239 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 298

Query: 381 IALFMNRLNAKIALKEKK 398
           +++   ++  + A    +
Sbjct: 299 LSIVQAQVERRYARGAVR 316


>gi|145641226|ref|ZP_01796806.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           R3021]
 gi|145274063|gb|EDK13929.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           22.4-21]
          Length = 221

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 25/235 (10%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE--------KTGKALPLL 222
           + +  LS           + V S +LG+ LSL    L  +              + LP +
Sbjct: 1   MFSDFLSLMFTAALMTLGLAVCSLILGLFLSLIFAALEANRFVGKPMTVFVVLLRGLPEI 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +   + FG   LV +     + F                   F    +ALS   AA+ +
Sbjct: 61  IVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVLALSLIFAAYAS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           + +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L  
Sbjct: 104 QTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWLVLLKDTALVS 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  DL+     I   T Q      I   IYL+++++  + + +L  +    E+
Sbjct: 164 LIGVDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRFER 218


>gi|93005166|ref|YP_579603.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92392844|gb|ABE74119.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 248

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 9/230 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                 +  ++     +   +  +  + V+G +  +      R    K  +A+   Y++ 
Sbjct: 17  GSELYIHWMITGLGWLLLIGSIAWAIAMVVGTIFGIM-----RTLPNKGARAIGTAYVTF 71

Query: 227 FLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F    +P LV +   + +   +  P + ++ +   S  +   +S  I L  +TAA I E 
Sbjct: 72  F--RNIPLLVQLFFWFYIAPGWLTPSIQEWWYKDLSPNTSAMLSASIGLGLFTAARIVEQ 129

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++P+GQ+ AA ALG +  +A + VLLPQA R I+PPL+S+  N  KN+S+A  V
Sbjct: 130 VRTGIESLPQGQINAAYALGFSIPQAYKEVLLPQAFRIILPPLSSELTNCFKNASVASLV 189

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L+S   TI   T  ++EI      IYL  ++ +   M  +  K+ +
Sbjct: 190 GVMELISQTKTISEYTQNSLEIYTYATIIYLVFNLSLIAIMGLIERKLRV 239



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 30/83 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G      +       A ++GT+ G  R   NK    I   YV  FRNIP LV 
Sbjct: 21  YIHWMITGLGWLLLIGSIAWAIAMVVGTIFGIMRTLPNKGARAIGTAYVTFFRNIPLLVQ 80

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +FF +      L           
Sbjct: 81  LFFWFYIAPGWLTPSIQEWWYKD 103


>gi|125718666|ref|YP_001035799.1| ABC-type arginine/histidine transport system, permease component,
           putative [Streptococcus sanguinis SK36]
 gi|125498583|gb|ABN45249.1| ABC-type arginine/histidine transport system, permease component,
           putative [Streptococcus sanguinis SK36]
          Length = 268

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 107/259 (41%), Gaps = 16/259 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++    Y+  L  +P       L          L    +T+   A   VF  +L +V ++
Sbjct: 6   LLTTGWYEEFLKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFGILLAMVFAI 64

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFNFI 257
                 +  +       P+       + G P LV + L Y   F  P+L      ++   
Sbjct: 65  VKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLKAINQKYGTS 114

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                 P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P
Sbjct: 115 FNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIP 174

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A     P L +  + L K +SLA + G  ++ +    I     +  E  +    IY ++
Sbjct: 175 NAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAV 234

Query: 378 SIMIALFMNRLNAKIALKE 396
           +I+I      +   + +K+
Sbjct: 235 NILIEQLGRWIEKMMDIKQ 253


>gi|322804727|emb|CBZ02279.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           H04402 065]
          Length = 214

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 110/232 (47%), Gaps = 19/232 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            + +     +    L    ++        +FS  LGI+++     + ++   K  K +  
Sbjct: 1   MMNVSNLSDITIFILKGSIISFKLFIVTIIFSIPLGILIA-----MGKNSKIKPLKII-- 53

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L   T++  G P ++ +   Y   F  PV+       G  + P   + Y+       A++
Sbjct: 54  LSAYTWIFRGTPLMLQLFFAY---FGLPVI-------GIRLEP-LTAAYLTFIINYGAYL 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+G+ ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+S+L 
Sbjct: 103 AETFRAGIESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALV 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A+G  D++     ++ +    I    I   IYL ++  + +    L  K A
Sbjct: 163 AAIGIGDMLRAAKEVVTRDF-TITPFFIAAAIYLLITAFLVIIFRTLEKKCA 213



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + +F L    +I +  +G L+  G+ S  K +  I   Y  +FR  P ++ +FF 
Sbjct: 14  ILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIKPLKIILSAYTWIFRGTPLMLQLFFA 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +          +N 
Sbjct: 74  YFGLPVIGIRLEPLTAAYLTFIINY 98


>gi|317402647|gb|EFV83205.1| amino acids ABC transporter [Achromobacter xylosoxidans C54]
          Length = 233

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 11/238 (4%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                     F        L     T+      ++ +F++G +L++      R       
Sbjct: 1   MHYVFDFSAIFQGEYPAWLLRGLVTTLALAGLAWILAFLVGSLLAVI-----RLTGSPVA 55

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSC 275
            AL  LY++      +P LV I   Y   F  P +L Q      +T   EF+   IA+  
Sbjct: 56  NALIALYVAF--HRNVPMLVHILFWY---FGVPALLPQVATDWLNTHGSEFILSCIAIGL 110

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +A++ E +RS +  +P GQ+EAA ALGL   +  R V+LPQA R  IPPL +Q L L+
Sbjct: 111 VMSAYVCEDLRSAVRGIPPGQVEAARALGLGFLRTMRCVVLPQAFRIAIPPLLNQTLLLV 170

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           KN+SLA+A+G A+L + G  I N T +  E   +   IYL LS +I      L  +  
Sbjct: 171 KNTSLAMAIGVAELTAAGREIENYTFRTFEAYAVVTAIYLLLSFLIMGGGALLQRRYR 228



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 41/84 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G V T  LA    I A ++G+L+   RL+ + +   +  +YV   RN+P LV 
Sbjct: 15  YPAWLLRGLVTTLALAGLAWILAFLVGSLLAVIRLTGSPVANALIALYVAFHRNVPMLVH 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           I F Y  V ++LP      +   G
Sbjct: 75  ILFWYFGVPALLPQVATDWLNTHG 98


>gi|156935790|ref|YP_001439706.1| hypothetical protein ESA_03661 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534044|gb|ABU78870.1| hypothetical protein ESA_03661 [Cronobacter sakazakii ATCC BAA-894]
          Length = 344

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P+        A++VG V+         I       L   GR  
Sbjct: 54  WVFIHARFG-QFMYGLYPHDERWRINLALIVGLVS---------IVPMFWKGLPQRGR-- 101

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +    PLVV + +Y   L +  +                     T
Sbjct: 102 -----------YITCWAIAYPLVVWWLMYGGFLGLERVETRQ-------------WGGLT 137

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 138 LTLIIASVGIAGALPLGILLAL-----GRRSRMPVVRVLSVIFIEFWRGVPLITVLFMS- 191

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 192 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 242

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 243 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 302

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 303 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFHTGR 341


>gi|59713575|ref|YP_206350.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114]
 gi|59481823|gb|AAW87462.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114]
          Length = 264

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 19/244 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD       G +     +    +T+  +A   + +  + +V +L      
Sbjct: 36  MNYQWQWDRVPDFIFFYEDGEWFPAELIEGLLVTLQISAISAIATLAIALVTALL----- 90

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  +   GK +  LYI   LI   P LV I L Y +             G       F +
Sbjct: 91  RLSNSIVGKTISTLYIE--LIRNTPLLVQIYLLYFVF------------GPFLGLERFTT 136

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AEI+RSGLI +P+GQ EA   LGL+   + R V+LPQ +R  +P LT
Sbjct: 137 AVLALALFQGAYTAEILRSGLINLPKGQFEACKTLGLSQFNSYRYVVLPQVIRKTLPSLT 196

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I++ T    EI      IYL +++ ++     L
Sbjct: 197 NELVSLVKNSSIVSVMAIFDLTTEGRNIVSDTAMPFEIWFTVAAIYLMITLSLSALSAWL 256

Query: 389 NAKI 392
             ++
Sbjct: 257 EYRM 260



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  ++    I    I  +    RLS + +   I  +Y+E+ RN P LV I+ L
Sbjct: 62  LIEGLLVTLQISAISAIATLAIALVTALLRLSNSIVGKTISTLYIELIRNTPLLVQIYLL 121

Query: 149 YKSV 152
           Y   
Sbjct: 122 YFVF 125


>gi|17986396|ref|NP_539030.1| asparagine transport system permease protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|23502804|ref|NP_698931.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|62290806|ref|YP_222599.1| amino acid ABC transporter permease [Brucella abortus bv. 1 str.
           9-941]
 gi|82700716|ref|YP_415290.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|161619873|ref|YP_001593760.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|189025022|ref|YP_001935790.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225628153|ref|ZP_03786188.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225853391|ref|YP_002733624.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis ATCC 23457]
 gi|237816316|ref|ZP_04595309.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|254690094|ref|ZP_05153348.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 6 str. 870]
 gi|254694582|ref|ZP_05156410.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|254696207|ref|ZP_05158035.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254700594|ref|ZP_05162422.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella suis bv.
           5 str. 513]
 gi|254704964|ref|ZP_05166792.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella suis bv.
           3 str. 686]
 gi|254707523|ref|ZP_05169351.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           pinnipedialis M163/99/10]
 gi|254708941|ref|ZP_05170752.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           pinnipedialis B2/94]
 gi|254731125|ref|ZP_05189703.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 4 str. 292]
 gi|256030467|ref|ZP_05444081.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           pinnipedialis M292/94/1]
 gi|256045555|ref|ZP_05448438.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256158451|ref|ZP_05456349.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti
           M490/95/1]
 gi|256253871|ref|ZP_05459407.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti
           B1/94]
 gi|256258347|ref|ZP_05463883.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 9 str. C68]
 gi|256263128|ref|ZP_05465660.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|260169375|ref|ZP_05756186.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella sp.
           F5/99]
 gi|260546068|ref|ZP_05821808.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260562865|ref|ZP_05833351.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260567563|ref|ZP_05838033.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|260755632|ref|ZP_05867980.1| ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260758857|ref|ZP_05871205.1| ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260760581|ref|ZP_05872924.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884657|ref|ZP_05896271.1| ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|261214906|ref|ZP_05929187.1| amino acid ABC transporter, permease [Brucella abortus bv. 3 str.
           Tulya]
 gi|261221007|ref|ZP_05935288.1| ABC transporter [Brucella ceti B1/94]
 gi|261315004|ref|ZP_05954201.1| ABC transporter [Brucella pinnipedialis M163/99/10]
 gi|261316439|ref|ZP_05955636.1| ABC transporter [Brucella pinnipedialis B2/94]
 gi|261751102|ref|ZP_05994811.1| ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261755664|ref|ZP_05999373.1| ABC transporter [Brucella suis bv. 3 str. 686]
 gi|261758896|ref|ZP_06002605.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|265987509|ref|ZP_06100066.1| ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|265991982|ref|ZP_06104539.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265996967|ref|ZP_06109524.1| ABC transporter [Brucella ceti M490/95/1]
 gi|297247190|ref|ZP_06930908.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|17981988|gb|AAL51294.1| asparagine transport system permease protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|23348827|gb|AAN30846.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|62196938|gb|AAX75238.1| amino acid ABC transporter, permease protein [Brucella abortus bv.
           1 str. 9-941]
 gi|82616817|emb|CAJ11912.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis biovar Abortus 2308]
 gi|161336684|gb|ABX62989.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|189020594|gb|ACD73316.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella abortus S19]
 gi|225616978|gb|EEH14025.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225641756|gb|ACO01670.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
 gi|237788383|gb|EEP62598.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260096175|gb|EEW80051.1| binding-protein-dependent transport system inner membrane component
           [Brucella abortus NCTC 8038]
 gi|260152881|gb|EEW87973.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 1 str. 16M]
 gi|260157081|gb|EEW92161.1| binding-protein-dependent transport system inner membrane component
           [Brucella suis bv. 4 str. 40]
 gi|260669175|gb|EEX56115.1| ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260671013|gb|EEX57834.1| ABC transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675740|gb|EEX62561.1| ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260874185|gb|EEX81254.1| ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|260916513|gb|EEX83374.1| amino acid ABC transporter, permease [Brucella abortus bv. 3 str.
           Tulya]
 gi|260919591|gb|EEX86244.1| ABC transporter [Brucella ceti B1/94]
 gi|261295662|gb|EEX99158.1| ABC transporter [Brucella pinnipedialis B2/94]
 gi|261304030|gb|EEY07527.1| ABC transporter [Brucella pinnipedialis M163/99/10]
 gi|261738880|gb|EEY26876.1| binding-protein-dependent transport system inner membrane component
           [Brucella sp. F5/99]
 gi|261740855|gb|EEY28781.1| ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261745417|gb|EEY33343.1| ABC transporter [Brucella suis bv. 3 str. 686]
 gi|262551435|gb|EEZ07425.1| ABC transporter [Brucella ceti M490/95/1]
 gi|263003048|gb|EEZ15341.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093030|gb|EEZ17180.1| binding-protein-dependent transport system inner membrane component
           [Brucella melitensis bv. 2 str. 63/9]
 gi|264659706|gb|EEZ29967.1| ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|297174359|gb|EFH33706.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|326409954|gb|ADZ67019.1| Binding-protein-dependent transport systems inner membrane
           component [Brucella melitensis M28]
 gi|326539670|gb|ADZ87885.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M5-90]
          Length = 240

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 14/226 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +     +           I + +   G ++S+    L    H +  + +   Y+
Sbjct: 1   MNFDFSVIFDNWTLFARGTWLTIVIAIVAIATGFLISI-PIALMALSHRRPLRWISSAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       +VL    Y L F                 PE +   IAL+ + +++ AEI
Sbjct: 60  EWFRNI-PFIVVLYLFFYGLPF------------MGVRLPESIVGTIALAFFASSYFAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S+   +
Sbjct: 107 IRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             A+L   G  I  +T    EI L    IY  ++ + A  M+R   
Sbjct: 167 TVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHRTEK 212



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T    G   T  +A   +    +I   +    LS  + + WI   YVE FRNIP +VV+
Sbjct: 12  WTLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPLRWISSAYVEWFRNIPFIVVL 71

Query: 146 FFLYKSVL 153
           +  +  + 
Sbjct: 72  YLFFYGLP 79


>gi|327193169|gb|EGE60078.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           etli CNPAF512]
          Length = 324

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 122/282 (43%), Gaps = 15/282 (5%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GR +   ++A +  + V +       V I  ++  +L +      +  L           
Sbjct: 58  GRFAIAFVIALLLVLNVVLIGFASLRVQIAIVWLELLGLFLAFFATFHLSLPFIAEKLPF 117

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 + T   +   S V+   +++    +++        A+   Y S F       L 
Sbjct: 118 MITQGLVTT-IYVSAVSIVIASAIAILG-AVAKLSTNGFAYAIASFYTSFFR-----GLP 170

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y ++   P L          V     +  +ALS    A++ EI RSG+ ++ RGQ
Sbjct: 171 LLMQVYLIYLGLPQL--------GFVIDAVPAGILALSLCYGAYMTEIFRSGIQSIDRGQ 222

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA+ ++G       R ++LPQA+  IIPP  +Q++++LK+SSL   +G  +L+ +  T+
Sbjct: 223 WEASRSIGFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTL 282

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T Q +E+++    +Y  +SI + L   R+    A  + +
Sbjct: 283 GQKTFQHMEMLISAAMLYWIMSIGLELIQARIERHYARSKVR 324



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G V T +++   ++ A+ I  L    +LS N     I   Y   FR +P L+ ++ +
Sbjct: 119 ITQGLVTTIYVSAVSIVIASAIAILGAVAKLSTNGFAYAIASFYTSFFRGLPLLMQVYLI 178

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +  +  + D        + L               + 
Sbjct: 179 YLGLPQLGFVIDAVPAGILALSLCYGAYMTEIFRSGIQSI 218


>gi|313648491|gb|EFS12933.1| general L-amino acid transport system permease aapQ domain protein
           [Shigella flexneri 2a str. 2457T]
          Length = 157

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 65/137 (47%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W   N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFQNTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+FRNI 
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIA 135

Query: 141 PLVVIFFLYKSVLSVLP 157
            L+++           P
Sbjct: 136 NLLLVLCRVAQFARTTP 152


>gi|190895200|ref|YP_001985493.1| nopaline ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700861|gb|ACE94943.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 231

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 5/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     +   S   G V+S+    L R        A  L Y   F   G P L
Sbjct: 10  LITLPRGLILTLALTFASLAAGFVVSIPLGFL-RASSNPWASAPVLAYTYCF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y      P++ Q        +   F   +IA +  +AA   EI+R G+ AVPRG
Sbjct: 67  VQLFLIYYGIGQLPLVRQSFL--WPVMREPFWCAFIAFTLNSAAHTTEILRGGIQAVPRG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA ALGL+     RL++ P  +R  +P   ++ + LLK SSLA  +   ++  +   
Sbjct: 125 QVEAAKALGLSSFHTARLIVFPLTIRIALPAYVNEVIGLLKASSLASTITLLEMTGLARQ 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +++QT    E+ ++    YL  +++I      L  + A 
Sbjct: 185 LVSQTFAPYEVFVVAGAFYLMFTLLITQSFQMLELRWAR 223


>gi|91787283|ref|YP_548235.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696508|gb|ABE43337.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 228

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 105/236 (44%), Gaps = 14/236 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           + +L                     AK+    F + ++L      + R           L
Sbjct: 2   NSILSVFYQYWPEWGPRLAEAAKVTAKLSSAGFAIALLLGAILVAMIRSGRP------AL 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            + + F I  + T+ L+AL   L+F  P L            P F +  I L  + AA++
Sbjct: 56  RFAANFFIQFVRTVPLLALLLALYFALPPL--------GITLPGFWAGIIGLGLHGAAYV 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R GL ++ RGQ EAA+A+GL   +    V+ PQA+R ++PPL + Y+ LLK+SSL 
Sbjct: 108 AEILRGGLQSIHRGQREAALAVGLAPHQVFMHVVFPQALRVMLPPLLNTYVALLKDSSLC 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L+     + ++    + I L+    Y +++  +++    L   ++   +
Sbjct: 168 ALIATDELMLTARAMSSEFFLPLHIFLLVGAFYFAIAFPLSMVSRALEKHLSRGRR 223


>gi|222081098|ref|YP_002540461.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725777|gb|ACM28866.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 222

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 101/237 (42%), Gaps = 17/237 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            D+       +  ++  L    LT+   A  F  + V G+ L L     +R    K    
Sbjct: 1   MDYQFQFGEVLANSDLLLRGIRLTLTLWALAFSGALVAGLFLGL-----ARASTVKWINW 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   YI  F     P LV +      ++  PVL  +           F +  + L   T+
Sbjct: 56  LATGYIEVF--RNTPVLVQLI---WFYYAFPVLTGW-------QMSSFTAAALGLFLNTS 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R+GL +V  GQ EAA ALG+T R+    ++LPQA R +IP  T++ + L K +
Sbjct: 104 AYCAEIWRAGLQSVASGQWEAASALGMTTRRTLARIILPQAARRMIPAFTNRGVELAKMT 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           S+A  +   +L+     +  Q+   +E   +   IY  +     L    L  ++  +
Sbjct: 164 SIASVITVQELMYEAKMLSTQSFLPLETFSVVAVIYFLVIYPGTLAAYGLERRLNSR 220



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 1/102 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L       A + G  +G  R S  K + W+   Y+EVFRN P LV + + 
Sbjct: 17  LLRGIRLTLTLWALAFSGALVAGLFLGLARASTVKWINWLATGYIEVFRNTPVLVQLIWF 76

Query: 149 YKSVLSVLPI-PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y +   +             G+FLN              +  
Sbjct: 77  YYAFPVLTGWQMSSFTAAALGLFLNTSAYCAEIWRAGLQSVA 118


>gi|17545202|ref|NP_518604.1| glutamate/aspartate transmembrane ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17427493|emb|CAD14011.1| probable glutamate/aspartate transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 227

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 6/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +N   L      M  + +I   + ++GIV       + R    K  +    
Sbjct: 1   MAYQFDFTSVNADNLRVLGEGMVLSLEITATAILVGIVWGTLL-AMMRLSGIKPLQWFGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y++ F       LV++ L + L   + +   FN    + +     S  +A + + AA+ 
Sbjct: 60  AYVNLFRSIP---LVMVLLWFFLIVPQVLQKLFNLSPATDMR--MTSALVAFALFEAAYY 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L +Q + L +++SL 
Sbjct: 115 SEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLV 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +D  +    I  + G+ +E++L   F Y  +    ++ + RL  K+
Sbjct: 175 YVSALSDFFTQAYNIGERDGRIVELLLFAGFCYFVICFGASVLVKRLQKKV 225



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 39/87 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G V +  +  + ++   + GTL+   RLS  K + W  + YV +FR+IP ++V+
Sbjct: 15  LRVLGEGMVLSLEITATAILVGIVWGTLLAMMRLSGIKPLQWFGQAYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            + +  V  VL    +          +
Sbjct: 75  LWFFLIVPQVLQKLFNLSPATDMRMTS 101


>gi|326793483|ref|YP_004311303.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326544247|gb|ADZ89467.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 216

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F N   +            + + +F+ G +++L  T L R       + L  +YI  F  
Sbjct: 4   FSNYDIIRNLIFAAQWTVLLSLVAFIGGTLVALVLTAL-RLTRNSILQKLVAVYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+AF+ EI R  +
Sbjct: 61  QGTPLLMQMFLCF-----------FGVSLLGYEISAWSAAILALTLFTSAFLVEIWRGCI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             +P+GQ EA+  LG++  +  R ++LPQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 DTLPKGQWEASRCLGMSFLQILRYIILPQALRVAIAPTVGFSVQVVKGTALASVIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G  + N T +  ++  +   IY  L   ++L    L  K  +  
Sbjct: 170 TKAGTMLNNATFEPFKVFAMVAVIYFLLCYPLSLSSKILEKKFNVSR 216



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 38/105 (36%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S+      ++     T  L+    I  T++  ++ A RL+ N ++  +  VY+E+F+  P
Sbjct: 5   SNYDIIRNLIFAAQWTVLLSLVAFIGGTLVALVLTALRLTRNSILQKLVAVYIELFQGTP 64

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
            L+ +F  +  V  +             + L              
Sbjct: 65  LLMQMFLCFFGVSLLGYEISAWSAAILALTLFTSAFLVEIWRGCI 109


>gi|284163417|ref|YP_003401696.1| polar amino acid ABC transporter inner membrane protein
           [Haloterrigena turkmenica DSM 5511]
 gi|284013072|gb|ADB59023.1| polar amino acid ABC transporter, inner membrane subunit
           [Haloterrigena turkmenica DSM 5511]
          Length = 339

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 5/239 (2%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
              D    L  G+ L                 + + S  LG+V+++    +    +    
Sbjct: 83  VPMDWLASLLNGIALGIEIAPALAAGAWYTIVLTIASIALGLVIAVPVAVV--RVYGGPF 140

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSC 275
           +   L Y    LI G P L  + + Y   +    L   + IG G      F    +  + 
Sbjct: 141 RWFALAYTE--LIRGTPLLAQLFVLYYTPYLSVRLSDVDLIGRGFVPEYAFWIAIVGFTI 198

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             +A+ AE +R  L +V  GQ+ AA A+GL+  +  R V+LPQ +R  IP  T++ + L+
Sbjct: 199 NGSAYQAEYIRGALESVDEGQLTAARAIGLSKLEGIRHVVLPQTLRYGIPAWTNELVYLI 258

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           K SSLA  +   +L      I + T +   I ++   +Y+ L +     M+R+  ++A+
Sbjct: 259 KYSSLAGFITVPELYYRASDIASSTFEYTPIYVLLGLVYIGLVLSATNVMSRVERRVAV 317


>gi|163802096|ref|ZP_02195992.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159174237|gb|EDP59045.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 225

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +   + V+G+V+S+    ++R+            +I  F   G P L
Sbjct: 10  LPIYLDGLWTTVWLVAIALVIGLVISIPL-AIARNSENYVLSLPSWAFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGAINGLPSG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  +   DL      
Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  +     E  L     Y++L+ +I         + 
Sbjct: 181 VNARYYAPFESFLAAGLFYMALTFIILWCFKMAEKRF 217



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 32/80 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++   +I   +   R S N +++     ++  FR  P LV ++ +
Sbjct: 13  YLDGLWTTVWLVAIALVIGLVISIPLAIARNSENYVLSLPSWAFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y  +    P+ D      + 
Sbjct: 73  YYGMDQFFPVKDTLWENAWF 92


>gi|152971504|ref|YP_001336613.1| glutamine ABC transporter ATP-binding component [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|330013161|ref|ZP_08307582.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3]
 gi|150956353|gb|ABR78383.1| glutamine ABC transporter ATP-binding component [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|328533587|gb|EGF60305.1| ABC transporter, ATP-binding protein [Klebsiella sp. MS 92-3]
          Length = 506

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +G F +   +        T   I   S+ +G+V+       ++    +  K    L
Sbjct: 1   MAFDWGYFFSLFSIGAFWQACVTVIVISTLSWGIGLVVGFLL-ACAKLSAPRWVKIPVEL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F    +P +VL+   Y L    PV      +        F++  ++++   AA++A
Sbjct: 60  YIWFF--RSVPLMVLLVFVYNLPQLFPVTQPLLGV-------PFIAGLVSMTVTEAAYMA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL++V +GQ EA  AL  +     RL+++PQA R  +P L ++Y+ ++K SS+  
Sbjct: 111 EIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V   +L+  G  +  Q    +E +L     Y+ +  +       L  ++ ++ K+
Sbjct: 171 VVSLPELLLTGQRLYAQNFLVMETLLAVAVYYVMVVTVFTWLFRALENRLDIQRKR 226



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A     V    ++        ++G L+   +LSA + V     +Y+  FR++P +V++ F
Sbjct: 16  AFWQACVTVIVISTLSWGIGLVVGFLLACAKLSAPRWVKIPVELYIWFFRSVPLMVLLVF 75

Query: 148 LYK 150
           +Y 
Sbjct: 76  VYN 78


>gi|15595510|ref|NP_249004.1| L-cysteine transporter of ABC system YecS [Pseudomonas aeruginosa
           PAO1]
 gi|107099295|ref|ZP_01363213.1| hypothetical protein PaerPA_01000307 [Pseudomonas aeruginosa PACS2]
 gi|116054040|ref|YP_788483.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218889053|ref|YP_002437917.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254243411|ref|ZP_04936733.1| hypothetical protein PA2G_04225 [Pseudomonas aeruginosa 2192]
 gi|296386807|ref|ZP_06876306.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313112074|ref|ZP_07797858.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|9946159|gb|AAG03702.1|AE004469_7 L-cysteine transporter of ABC system YecS [Pseudomonas aeruginosa
           PAO1]
 gi|115589261|gb|ABJ15276.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126196789|gb|EAZ60852.1| hypothetical protein PA2G_04225 [Pseudomonas aeruginosa 2192]
 gi|218769276|emb|CAW25036.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310884360|gb|EFQ42954.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 230

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               F              S VLG++L  F+  + R         +  +Y+S F   G P
Sbjct: 20  MAWPFLLQGAMYTVLFAAVSMVLGLILG-FSVAVVRVTKVPVVSQIAAVYVSAF--RGTP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y                         +  +AL+   AA+++E +R  ++ + 
Sbjct: 77  LLVQIFVLYY-----------GLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGID 125

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA +++GLT  +    ++ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 126 KGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLAT 185

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +I +T Q + + L    IY  LS +       L  ++    ++
Sbjct: 186 KEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR 230



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 37/87 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G + T   A   M+   I+G  V   R++   +V+ I  VYV  FR  P LV I
Sbjct: 22  WPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQI 81

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           F LY  + SV             + LN
Sbjct: 82  FVLYYGLPSVGIEFTPVTAGILALTLN 108


>gi|323350322|ref|ZP_08085987.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123507|gb|EFX95178.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|327459300|gb|EGF05646.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327490517|gb|EGF22298.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 269

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 107/259 (41%), Gaps = 16/259 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++    Y+  L  +P       L          L    +T+   A   VF  +L +V ++
Sbjct: 7   LLTTGWYEEFLKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFGILLAMVFAI 65

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFNFI 257
                 +  +       P+       + G P LV + L Y   F  P+L      ++   
Sbjct: 66  VKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLKAINQKYGTS 115

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                 P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P
Sbjct: 116 FNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIP 175

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A     P L +  + L K +SLA + G  ++ +    I     +  E  +    IY ++
Sbjct: 176 NAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAV 235

Query: 378 SIMIALFMNRLNAKIALKE 396
           +I+I      +   + +K+
Sbjct: 236 NILIEQLGRWIEKMMDIKQ 254


>gi|289627072|ref|ZP_06460026.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|330866807|gb|EGH01516.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 482

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 289 RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 341

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 342 VVYQSAYLCEIIRGAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFIS 401

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 402 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVERRI 461

Query: 393 ALKE 396
           A K 
Sbjct: 462 ARKR 465



 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +          +   + + L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYH-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   +  +  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLAIS 213



 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLTESTQLWLANYS 98


>gi|209559793|ref|YP_002286265.1| Putative amino acid ABC transproter [Streptococcus pyogenes NZ131]
 gi|209540994|gb|ACI61570.1| Putative amino acid ABC transproter [Streptococcus pyogenes NZ131]
          Length = 267

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 100/259 (38%), Gaps = 9/259 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
               +   + +   L                      +    +T+        F  VL +
Sbjct: 2   TSVFLTSGWAFYDYLISPIPHGKLFSWHAVFDAIPNIIQRLPITLGLTLSGATFGLVLAL 61

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNF 256
           + +L      +  +       P+  I    + G P LV + L Y     F K +  ++ F
Sbjct: 62  IFALVKINKVKLLY-------PIQAIFVSFLRGTPILVQLMLTYYGIPLFLKFLNQKYGF 114

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P  +    A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R  ++
Sbjct: 115 DWNVNAIPASIFAITAFAFNEAAYASETIRAAILSVDTGEIEAAKSLGMTSVQVYRRGII 174

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A    IP L +  + L K +SL    G  ++V+    +     +  E  +    +Y S
Sbjct: 175 PNATGGAIPTLINGLIGLTKGTSLGFNAGIVEMVAQAQILGGSDYRYFERYISVALVYWS 234

Query: 377 LSIMIALFMNRLNAKIALK 395
           +SI++      +  K+A+K
Sbjct: 235 ISILMEQVGRLIENKMAIK 253


>gi|171316941|ref|ZP_02906148.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097865|gb|EDT42685.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 229

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLVGWEQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GAAYGMSGMRVFVRIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      ILI   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILIAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|229490879|ref|ZP_04384714.1| glutamate transporter permease protein GluD [Rhodococcus
           erythropolis SK121]
 gi|229322269|gb|EEN88055.1| glutamate transporter permease protein GluD [Rhodococcus
           erythropolis SK121]
          Length = 298

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 15/237 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         +     T+   A   VF+ +LG  L +      R       + +  
Sbjct: 53  WDPFLESTSWTTYLIPGIRGTLIAAAMSIVFALILGSALGI-----GRLSEHNIIRKICG 107

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +  F    +P L+L+   YQ+  +  V          +      ++ + L+ Y  + I
Sbjct: 108 VIVELF--RAVPVLILMIFSYQVFAEYEVFK--------SKYLALAAVVVGLTLYNGSVI 157

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR+G+ ++PRGQ EAA ALG+   +    +LLPQA+ +++P L SQ +  LK+S+L 
Sbjct: 158 AEIVRAGINSLPRGQSEAAKALGMRKTQIMVTILLPQAVTAMLPALISQMVVALKDSALG 217

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G+ +LV     +    G  +  +++   I ++L+  +     ++  ++   ++K
Sbjct: 218 YLIGYVELVRQAQQLGTFYGNFLPALIVVAAIMIALNSALTFLATKVEKRLRSGKRK 274



 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 20/148 (13%)

Query: 15  RMKFLYD---MRVHNIS-VQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R   LYD    R  N+     ++   L V   + +                  L E+   
Sbjct: 4   RATVLYDAPGPRARNLYRFASLVVAALMVAIGYVIYRA---------------LDEKGQL 48

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
              +   P+   +S+ T ++ G   T   A   ++ A I+G+ +G GRLS + ++  IC 
Sbjct: 49  TAAK-WDPFLESTSWTTYLIPGIRGTLIAAAMSIVFALILGSALGIGRLSEHNIIRKICG 107

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           V VE+FR +P L+++ F Y+        
Sbjct: 108 VIVELFRAVPVLILMIFSYQVFAEYEVF 135


>gi|170742665|ref|YP_001771320.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196939|gb|ACA18886.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 230

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 111/230 (48%), Gaps = 2/230 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTF 227
           M  N       +           F+  L  + ++  T L           LP+L  ++  
Sbjct: 1   MLSNFDFSVIVSALPYLFLTGMTFTLTLTALAAVSGTILGTLIAMMRLSGLPVLPLVAKG 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVR 286
            +  + +L L+ + +  +F  P LGQ+       +    F S  +  + + AA+ +EI+R
Sbjct: 61  YVNFMRSLPLVLVIFWFYFLVPYLGQWLIGAERPIQVGAFTSSLVTFTLFEAAYFSEIMR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++P+GQ  AA ALGLT+ ++   V+LPQA R+++P L +Q + L +++SL   +  
Sbjct: 121 AGIQSIPKGQAAAASALGLTYWQSMGSVILPQAFRNMLPVLLTQTIVLFQDTSLVYVLSI 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D +     +  + G+ +E+ L    +Y ++  + ++ + RL  +IA+  
Sbjct: 181 TDFLGAASKVAQRDGRLVEMYLFAALVYFAICFLASILVRRLQRRIAIIR 230



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  L     +  TI+GTL+   RLS   ++  + + YV   R++P ++VIF+ 
Sbjct: 18  FLTGMTFTLTLTALAAVSGTILGTLIAMMRLSGLPVLPLVAKGYVNFMRSLPLVLVIFWF 77

Query: 149 YKSVLSVLPI 158
           Y  V  +   
Sbjct: 78  YFLVPYLGQW 87


>gi|307300763|ref|ZP_07580538.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306904297|gb|EFN34882.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 218

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 14/226 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                           +   +F  G V  L    L R    +  +     +I  F   G 
Sbjct: 7   WNEFLVIVAAAQWTIALSAIAFAGGSVGGLL-MALMRVSETRALRLFATGFIRVF--QGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + L +           F           +++  IAL+ + +AF+ EI R  + AV
Sbjct: 64  PLLMQLFLVF-----------FGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA ALGL + ++ R V+LPQA R  + P     + L+K +SLA  +GF +L   
Sbjct: 113 PKGQREAATALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQ 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  I N T     +      +Y  L   ++L   R+  + +    +
Sbjct: 173 GQIINNATFSPFLVFGTVAAVYFLLCWPLSLIARRMETRFSRATAR 218



 Score = 36.8 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 35/106 (33%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +    I+     T  L+       ++ G L+   R+S  + +      ++ VF+  P 
Sbjct: 6   GWNEFLVIVAAAQWTIALSAIAFAGGSVGGLLMALMRVSETRALRLFATGFIRVFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L+ +F ++  +       +  I     + L+              A
Sbjct: 66  LMQLFLVFFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEA 111


>gi|294791035|ref|ZP_06756193.1| glutamate transport system permease protein GluD [Scardovia
           inopinata F0304]
 gi|294458932|gb|EFG27285.1| glutamate transport system permease protein GluD [Scardovia
           inopinata F0304]
          Length = 443

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 114/257 (44%), Gaps = 16/257 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMF---LNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +++   +   +  +   P     L + ++   LN+   +   L             ++G 
Sbjct: 36  ILIAGLVLAVLFRLHNPPQGENQLSWDLWRPALNSEAWTDFYLPGLVQTLAASVVAIIGS 95

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L      + R    +  + +  + +       +  +++   ++    + P         
Sbjct: 96  MLYGLIFGIGRLLPNRVIRFISGIIVEFCRAVPVLLMMIFMWRWFSSVNLP--------- 146

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
               S  + ++ I+L  Y  + +AE+VRSG+ ++P GQ EAA+ALGLT  ++  L+ +PQ
Sbjct: 147 ----SSSYWAVTISLILYNGSVVAELVRSGVGSLPDGQREAALALGLTRTRSLMLIEVPQ 202

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ +++P   +Q + +LK+++L   + + DL+     + +     ++ + +   +Y  + 
Sbjct: 203 ALYAMLPAAITQLVVVLKDTALGSIILYTDLLQQSRRLGSMYFNILQALTVAAVLYFIMC 262

Query: 379 IMIALFMNRLNAKIALK 395
            +++     L +++A +
Sbjct: 263 FIVSRIAEWLPSRLASR 279



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 17/151 (11%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R+ NI   I++A L+  +         +N  +    L    L   A            + 
Sbjct: 28  RIANIIGSILIAGLVLAVLFRL-----HNPPQGENQLSWD-LWRPA-----------LNS 70

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            ++    L G V T   +   +I + + G + G GRL  N+++ +I  + VE  R +P L
Sbjct: 71  EAWTDFYLPGLVQTLAASVVAIIGSMLYGLIFGIGRLLPNRVIRFISGIIVEFCRAVPVL 130

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +++ F+++   SV         +   + L N
Sbjct: 131 LMMIFMWRWFSSVNLPSSSYWAVTISLILYN 161


>gi|49078488|gb|AAT49790.1| PA1340 [synthetic construct]
          Length = 223

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 7/220 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      M    K+ V   + G+ L      L R  H K    +   Y++ F      ++
Sbjct: 11  LPSLWEGMLMTLKLMVLGVLGGVALGTVL-ALMRLSHSKLLSNIAGFYVNYFR-----SI 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +F  P + ++   G  T    F S  +A   + AA+  EIVR+G+ A+P+G
Sbjct: 65  PLLLVITWFYFAVPFILRW-ITGEDTPVGAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKG 123

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+T+ +  RLV+LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 124 QMGAAQALGMTYGQTMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARS 183

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +  GQA E ++    +Y  +S   +  + RL  ++ + 
Sbjct: 184 RGDIIGQANEFLIFAGLVYFVVSFTASFAVKRLQKRLTVG 223



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L   G++    +GT++   RLS +KL++ I   YV  FR+IP L+VI + 
Sbjct: 14  LWEGMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWF 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  +L                               
Sbjct: 74  YFAVPFILRWITGEDTPVGAFTSCLVAFMMFEAAYYCEI 112


>gi|107024071|ref|YP_622398.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|105894260|gb|ABF77425.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 226

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF +G++L+ F   L+R F  +  +A+   YI  F   G P LV + + +    
Sbjct: 24  VPLTLASFAIGLLLA-FGAALTRLFGPRWAQAVVRFYIWLF--RGSPLLVQLFVIFY--- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T
Sbjct: 78  --------GLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R  +LPQA R  +P L++ +++L+K++SLA  +   ++      I   T + + +
Sbjct: 130 RAQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLIL 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 IYL  S +++    RL  +   
Sbjct: 190 YTEAALIYLLFSSVLSSLQRRLELRFGR 217



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G V T  L  +      ++       RL   +    + R Y+ +FR  P LV +F +
Sbjct: 16  LVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAVVRFYIWLFRGSPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + +V  + D       G  LN
Sbjct: 76  FYGLPNVGIVLDPLTAAVIGFSLN 99


>gi|325697688|gb|EGD39573.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 269

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 107/259 (41%), Gaps = 16/259 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++    Y+  L  +P       L          L    +T+   A   VF  +L +V ++
Sbjct: 7   LLTIGWYEEFLKFIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFGILLAMVFAI 65

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFNFI 257
                 +  +       P+       + G P LV + L Y   F  P+L      ++   
Sbjct: 66  VKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLKAINQKYGTS 115

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                 P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P
Sbjct: 116 FNINDIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIP 175

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A     P L +  + L K +SLA + G  ++ +    I     +  E  +    IY ++
Sbjct: 176 NAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAV 235

Query: 378 SIMIALFMNRLNAKIALKE 396
           +I+I      +   + +K+
Sbjct: 236 NILIEQLGRWIEKMMDIKQ 254


>gi|54309365|ref|YP_130385.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium profundum SS9]
 gi|46913801|emb|CAG20583.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium profundum SS9]
          Length = 365

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  LV+     +  + +  +  +     F ++    GL      +     + +   ++GI
Sbjct: 110 ISLLVIEKTPGRKWIWLFFVNVYPFFAGFLLYGGVFGLEVVDTHLWGGLLVTLVIAIVGI 169

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V+SL    A  L R       +++  +YI  +    L T++ +A         P+     
Sbjct: 170 VVSLPIGVALALGRRSDMPIIRSICTIYIEIWRGVPLITVLFMA-----SVLLPL----- 219

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+       +     I +  ++AA++AE+VR GL A+PRGQ EAA ALGL++ K+  L++
Sbjct: 220 FLTSEMEMDKLFRALIGVVLFSAAYMAEVVRGGLQAIPRGQYEAADALGLSYWKSMYLIV 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G    +     G + E  +    
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANSDPEWLGFSTESYIFVAL 339

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  K+    K+
Sbjct: 340 VFWVFCFSMSRYSIFLENKLHTGHKR 365



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 80/200 (40%), Gaps = 7/200 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +A  G++ +  IG  +  GR S   ++  IC +Y+E++R +P L+ + F+
Sbjct: 154 LWGGLLVTLVIAIVGIVVSLPIGVALALGRRSDMPIIRSICTIYIEIWRGVP-LITVLFM 212

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLF 203
              +L +    +  +   F   +     S   +       +             + LS +
Sbjct: 213 ASVLLPLFLTSEMEMDKLFRALIGVVLFSAAYMAEVVRGGLQAIPRGQYEAADALGLSYW 272

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
            +       +     +P +  +   +F   +LVLI   +  L   +       ++G ST 
Sbjct: 273 KSMYLIVLPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANSDPEWLGFSTE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
           S  F++L   + C++ +  +
Sbjct: 333 SYIFVALVFWVFCFSMSRYS 352


>gi|199599084|ref|ZP_03212490.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229553194|ref|ZP_04441919.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258509002|ref|YP_003171753.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258540196|ref|YP_003174695.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|199590047|gb|EDY98147.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229313490|gb|EEN79463.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257148929|emb|CAR87902.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257151872|emb|CAR90844.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259650295|dbj|BAI42457.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 214

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T  +     + + +L ++ SL    L         K L ++      +  
Sbjct: 1   MWSILTNNWNTFLSGLGFTLAASILALIGSLIVGTLFALMEISPFKPLRVIGRIYVEVVR 60

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              L++I L + +     ++ QF           F +  I L  YT+AFIAE VR+G+ A
Sbjct: 61  NIPLLVITLAFYV-----IVPQF-----IVKIDGFTAGTIGLLIYTSAFIAETVRAGIEA 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQME A ++G+T+ +A   ++ PQA + +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 VPSGQMEGARSIGMTYTQAMTQIIFPQAFKIVIPPLGNQFINLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  I   T    +  LI    YL L++ ++  M  L  K
Sbjct: 171 QGKLIAATTFSTFDTYLIVGIFYLILTMPLSYLMRYLEKK 210



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 40/102 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L G   T   +   +I + I+GTL     +S  K +  I R+YVEV RNIP LV+ 
Sbjct: 9   WNTFLSGLGFTLAASILALIGSLIVGTLFALMEISPFKPLRVIGRIYVEVVRNIPLLVIT 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              Y  V   +   D       G+ +        T+     A
Sbjct: 69  LAFYVIVPQFIVKIDGFTAGTIGLLIYTSAFIAETVRAGIEA 110


>gi|288958133|ref|YP_003448474.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288910441|dbj|BAI71930.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 368

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 14/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+       +     +     + V    +   LS+    L R  +    K L + YI
Sbjct: 143 MWGGVLGLTYVENTLWGGLPLTIILSVIGLAVAFPLSILL-ALGRRSNMPAVKVLCVTYI 201

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L +L+ +A           +    F+       + +   IA   + AA++AE 
Sbjct: 202 ELIRGVPLISLLFMA----------SVMLPLFLPNGVSIDKLLRAQIAFILFAAAYMAEA 251

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL A+P+GQ EAA  LGL++ +  R ++LPQA+   IPPL + +++  K++SL + +
Sbjct: 252 IRGGLQAIPKGQYEAADGLGLSYWQKMRKIVLPQALAVAIPPLVNTFISFFKDTSLVIII 311

Query: 345 GFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  DL+      ++     G   E  L    IY      ++ +  +L   +    ++
Sbjct: 312 GLYDLLGTAKAALSDPSWRGFYREAYLFIGVIYWIFCFSMSKYSQKLERDLNRGHRR 368


>gi|170691133|ref|ZP_02882299.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170144382|gb|EDT12544.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 216

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+     +     +   + V G ++ L A  L R F       +  LY   F   G 
Sbjct: 7   MTSLAILFQGLLATLLLSAAAIVGGTLIGLLAAVL-RSFGPWGTPTVARLYTELF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y           F           F +  + LS Y  A+IAE+ RSG+ AV
Sbjct: 64  PVLITLMFIY-----------FGVSYFGYAIDVFAAGVVGLSVYQGAYIAEVFRSGIEAV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ E A  LGL+  +A   V+LPQ  + ++PPL  QYL+L+K++S+   +G ++L+  
Sbjct: 113 PKGQWEVAQILGLSKTQAFFSVILPQTGKIVMPPLIGQYLSLIKDTSIVSMIGMSELMHG 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  I+++ G+ +EI  +   +Y  +   ++ ++   + + +L
Sbjct: 173 GQAIVDRIGKPVEIYGLVAVLYFIVCFPLSQWVRHHDRRRSL 214



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+ + ++  T+IG L    R         + R+Y E+FR  P L+ + F+
Sbjct: 13  LFQGLLATLLLSAAAIVGGTLIGLLAAVLRSFGPWGTPTVARLYTELFRGTPVLITLMFI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  V       D       G+ +               A
Sbjct: 73  YFGVSYFGYAIDVFAAGVVGLSVYQGAYIAEVFRSGIEA 111


>gi|159186075|ref|NP_356420.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159141209|gb|AAK89205.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 197

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 18/204 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                 LG V+++      R             Y  T++  G P LV + + Y       
Sbjct: 1   MTAGLALGFVIAVMRMSKYRFLSGPA-------YFYTWIFRGTPLLVQLIIIYT------ 47

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                             S  I LS   AA+++EIVR+G+ AVP+GQ+ AA A+G+T  +
Sbjct: 48  -----GLPQMGIKLTVLQSTLIGLSLCEAAYLSEIVRAGIAAVPKGQINAARAIGMTEAQ 102

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R ++ PQA R IIPPL +    +LK +S+A  +   +L+     +I +    +E+  +
Sbjct: 103 VMRYIVAPQAFRIIIPPLGNSVNGVLKTTSIASIISMEELLRRTQVLIQEKFLVLELFTV 162

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
               YL+++    L   R+  +  
Sbjct: 163 AALYYLAMTTAWELIQRRIEKRFG 186


>gi|269960967|ref|ZP_06175336.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269834186|gb|EEZ88276.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 225

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 92/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   + V+G+ +S+    ++R+            +I  F   G P L
Sbjct: 10  FPVYLDGLWTTVWLVALALVIGLCVSIPL-AIARNSTNYALSLPSWAFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWEHAWFCALVAFVLNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  +   DL      
Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIITIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFIILWCFKIAEKRF 217



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G   T WL    ++    +   +   R S N  ++     ++  FR  P LV ++ 
Sbjct: 12  VYLDGLWTTVWLVALALVIGLCVSIPLAIARNSTNYALSLPSWAFIYFFRGTPLLVQLYL 71

Query: 148 LYKSVLSVLPIPDHSIVLPFG 168
           +Y  +    P+ D      + 
Sbjct: 72  IYYGMDQFFPVKDTLWEHAWF 92


>gi|170698477|ref|ZP_02889549.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170136648|gb|EDT04904.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 229

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +    +   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVETVKLAVLSLAASLVLGLAGAA-AKLSTNRALSWIGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +        +              F++  I L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNMATDALGWDQIDIDPFVAGVITLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 188 TLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 226



 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  LA   +  + ++G    A +LS N+ ++WI   Y  + R +P LV+
Sbjct: 6   FGPLLWAGTVETVKLAVLSLAASLVLGLAGAAAKLSTNRALSWIGTFYTTLIRAVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+  +
Sbjct: 66  MLLLFYGI 73


>gi|330954114|gb|EGH54374.1| glutamine ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 233

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 9/227 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +          +   + + L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTLQLAFVAWCLAMAVALLLVSIRLTGNKYAERLVAGYVSYH-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   I  +  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLSENTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               + N T +  E  L+   +YL++S+M+      L  + +    +
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLAISLMLMGLGAVLARQFSKAMAR 233



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTLQLAFVAWCLAMAVALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLSENTQIWLANYS 98


>gi|170754694|ref|YP_001780100.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|169119906|gb|ACA43742.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
          Length = 211

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 19/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    L    ++        +FS  LGI+++     + ++   K  K +  L   T++ 
Sbjct: 6   DITIFILKGSIISFKLFIVTIIFSIPLGILIA-----MGKNSKIKPLKII--LSAYTWIF 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ +   Y   F  PV+       G  + P   + Y+       A++AE  R+G+
Sbjct: 59  RGTPLMLQLFFAY---FGLPVI-------GIRLEP-LTAAYLTFIINYGAYLAETFRAGI 107

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+S+L  A+G  D+
Sbjct: 108 ESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGDM 167

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     ++ +    I    I   IYL ++  + L    L  K A
Sbjct: 168 LRAAKEVVTRDF-TITPFFIAAAIYLLITAFLVLMFRTLEKKYA 210



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + +F L    +I +  +G L+  G+ S  K +  I   Y  +FR  P ++ +FF 
Sbjct: 11  ILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIKPLKIILSAYTWIFRGTPLMLQLFFA 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +          +N 
Sbjct: 71  YFGLPVIGIRLEPLTAAYLTFIINY 95


>gi|182418791|ref|ZP_02950058.1| L-cystine permease protein TcyB [Clostridium butyricum 5521]
 gi|237667901|ref|ZP_04527885.1| L-cystine transport system permease protein TcyB [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182377346|gb|EDT74906.1| L-cystine permease protein TcyB [Clostridium butyricum 5521]
 gi|237656249|gb|EEP53805.1| L-cystine transport system permease protein TcyB [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 213

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 108/228 (47%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + L  + L    +T++      V S  LGI++ L      R       + +   Y+
Sbjct: 1   MNYLLGLMPQVLEGLKVTLEIFILTLVLSIPLGIIVGLM-----RTSKSIILRKISGAYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ I + +   F  P++              F S  IA +    A+  EI
Sbjct: 56  --LIMRGTPLLLQIIVIF---FGLPLV--------GITFDRFPSAIIAFTLNYGAYFGEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++  GQ+EAA  LG+T +     ++LPQA ++++PP+ ++   L+K++SL   V
Sbjct: 103 FRAGIQSIDEGQIEAAEVLGITPKDTFFRIILPQAFKTVLPPVANEITTLVKDTSLVYIV 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +L+ VG    N+    +  +L+   +YL +  +++  + +L  K 
Sbjct: 163 GMDELLKVGKIASNRDVSLLP-LLVVGAVYLIVIGILSKLLKKLEYKY 209



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 34/99 (34%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ +  +G +VG  R S + ++  I   YV + R  P L+ I  ++
Sbjct: 12  LEGLKVTLEIFILTLVLSIPLGIIVGLMRTSKSIILRKISGAYVLIMRGTPLLLQIIVIF 71

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             +  V    D          LN              + 
Sbjct: 72  FGLPLVGITFDRFPSAIIAFTLNYGAYFGEIFRAGIQSI 110


>gi|312797282|ref|YP_004030204.1| glutamate/aspartate transport system permease protein gltK
           [Burkholderia rhizoxinica HKI 454]
 gi|312169057|emb|CBW76060.1| Glutamate/aspartate transport system permease protein gltK
           [Burkholderia rhizoxinica HKI 454]
          Length = 226

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 6/232 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  F        L           +I V + V+GIV       L R    K  +     
Sbjct: 1   MMHQFNWSGIPDALPTLWTGAVITLQITVLAIVVGIVWGTLL-ALMRLSGFKPLEWFARG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++ F       LV++ L + L    P L Q        V    +S  +A S + AA+ +
Sbjct: 60  YVTLFRSIP---LVMVLLWFFL--LVPQLLQRLLDVSPDVDIRLVSAMVAFSLFEAAYYS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AVPRGQ+ AA ALG+T+ +  RL++LPQA+R+++P L +Q + L +++SL  
Sbjct: 115 EIIRAGIQAVPRGQLSAASALGMTYGQGMRLIVLPQALRAMVPLLLTQAIVLFQDTSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  AD       + ++ G  +E++L    +Y  + ++ +  +  L  K+A 
Sbjct: 175 VISVADFFQTAANVGDRDGTIVEMVLFAGAVYFVVCVVASSLVKGLQKKVAR 226



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  +    ++   + GTL+   RLS  K + W  R YV +FR+IP ++V+ + 
Sbjct: 17  LWTGAVITLQITVLAIVVGIVWGTLLALMRLSGFKPLEWFARGYVTLFRSIPLVMVLLWF 76

Query: 149 YKSVLSV 155
           +  V  +
Sbjct: 77  FLLVPQL 83


>gi|298290458|ref|YP_003692397.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926969|gb|ADH87778.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 219

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 99/228 (43%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +    L       + + SF+ G ++        R    + G A    Y+  F  
Sbjct: 4   FTTWDIVRNLLLAARWTVLLSLVSFIGGSIVGALLL-FIRTAKGRLGPAFVKAYVEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F         P +++  +AL  ++AAF+ EI R  +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V RGQ EA+ +LG+ + +  R V+LPQA+R  IPP     + ++K ++L   +GF +L
Sbjct: 110 ESVARGQWEASSSLGMGYVQQMRHVILPQALRVAIPPTVGFSVQVVKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T +  ++  +   IY  L   ++     L  K+ +  +
Sbjct: 170 SKAGTVVTNATFEPFKVYGLVALIYFCLCWPLSKSSQILERKLNVAHR 217



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 36/108 (33%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L+    T  L+    I  +I+G L+   R +  +L     + YVEVF+  P 
Sbjct: 6   TWDIVRNLLLAARWTVLLSLVSFIGGSIVGALLLFIRTAKGRLGPAFVKAYVEVFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           L+ +F  +  +          +     + L +             +  
Sbjct: 66  LMQLFLAFFGLGLFGIDVPAWLAAGLALILWSAAFLTEIWRGCVESVA 113


>gi|323528627|ref|YP_004230779.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Burkholderia
           sp. CCGE1001]
 gi|323385629|gb|ADX57719.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. CCGE1001]
          Length = 219

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 12/209 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   + VL IV++  AT  ++       + L   Y+  F   G   LV +   + +
Sbjct: 14  VTIEIAACATVLAIVMAFVATA-AKLAPWAPLRWLGNAYVEIF--RGTSLLVQLFWFFFV 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P                F    + L  +  A+ +EI+R  L +VP GQ EAA+AL 
Sbjct: 71  LPLPPF---------RIEMTPFTVAIVGLGLHYGAYGSEILRGALRSVPGGQFEAALALN 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     R ++LPQAM + +PP T+  + LLK +SL   +  +DL      +   T +  
Sbjct: 122 LSPLTRMRRIVLPQAMINALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDEATFRTA 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           EI ++ + IY  L+ ++   M     +++
Sbjct: 182 EIFMLTLVIYFVLAQVLVAVMRHFERRVS 210



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 32/72 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A    + A ++  +  A +L+    + W+   YVE+FR    LV +F+ +  
Sbjct: 11  GTLVTIEIAACATVLAIVMAFVATAAKLAPWAPLRWLGNAYVEIFRGTSLLVQLFWFFFV 70

Query: 152 VLSVLPIPDHSI 163
           +       + + 
Sbjct: 71  LPLPPFRIEMTP 82


>gi|269303067|gb|ACZ33167.1| amino acid ABC transporter, permease protein [Chlamydophila
           pneumoniae LPCoLN]
          Length = 217

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 15/227 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + +    L     T+  +    +   +LG+++       S +F  K  K L   Y+
Sbjct: 1   MDHWLAIARLLLRGCGYTLCVSGIGILCGSILGLLIGTVT---SLYFPSKLTKLLANSYV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  +I G P  + I + Y   F  P +               ++  IALS  +AA++AE 
Sbjct: 58  T--VIRGTPLFIQILIVY---FGLPEVLPIE-------PTPLVAGIIALSMNSAAYLAEN 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ ++  GQ E+A+ LG    +    ++ PQ  ++I+P LT+++++L+K SS+ + V
Sbjct: 106 IRGGINSLSIGQWESAMVLGYKKYQIFIYIIYPQVFKNILPSLTNEFVSLIKESSILMVV 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  +L  V   I+++    +E+ LI   +Y  ++   +        +
Sbjct: 166 GVPELTKVTKDIVSRELNPMEMYLICAGLYFLMTTAFSCISRLSEKR 212



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVG--AGRLSANKLVAWICRVYVEVFRNIPPL 142
            A  +L G   T  ++  G++  +I+G L+G        +KL   +   YV V R  P  
Sbjct: 7   IARLLLRGCGYTLCVSGIGILCGSILGLLIGTVTSLYFPSKLTKLLANSYVTVIRGTPLF 66

Query: 143 VVIFFLYKSVLSVLP 157
           + I  +Y  +  VLP
Sbjct: 67  IQILIVYFGLPEVLP 81


>gi|152986188|ref|YP_001349726.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Pseudomonas
           aeruginosa PA7]
 gi|150961346|gb|ABR83371.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Pseudomonas aeruginosa PA7]
          Length = 222

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 12/221 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           ++  F  +L + +++ A  L R       + L + YI  F   G   L
Sbjct: 8   LPLLMEGAWVTVQVTFFGSLLAVAMAIIA-ALGRLAPWPAVRWLAIGYIELF--RGTSLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + L F  P L  FN   G      +    + L  +  A+ AE++R  + +VPRG
Sbjct: 65  VQL---FWLFFVLP-LPPFNLDLG-----AYTVAILGLGLHIGAYGAEVMRGAIGSVPRG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA+AL +T     R ++LPQA+   IPP T+  + LLKN+SL   +  +DL      
Sbjct: 116 QYEAALALNMTPFTRFRRIVLPQALLCAIPPGTNLLIELLKNTSLVSLITLSDLAFRARQ 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   T + ++I  + + +Y +++ +I   M RL  ++    
Sbjct: 176 LDQATFETLKIFSLTLVLYFAMAQVIVFLMRRLERRLGHGR 216



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  + F G + A  +  +   GRL+    V W+   Y+E+FR    LV +F+L
Sbjct: 11  LMEGAWVTVQVTFFGSLLAVAMAIIAALGRLAPWPAVRWLAIGYIELFRGTSLLVQLFWL 70

Query: 149 YKSVLSVLPI 158
           +  +      
Sbjct: 71  FFVLPLPPFN 80


>gi|15611941|ref|NP_223592.1| amino acid ABC transporter permease [Helicobacter pylori J99]
 gi|4155450|gb|AAD06454.1| putative AMINO ACID ABC TRANSPORTER, PERMEASE PROTEIN [Helicobacter
           pylori J99]
          Length = 237

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+   ++ IV++L      +HF  K   A    Y+S  +I G P LV I + + 
Sbjct: 41  PLAIISFILGLLIAIVVALIKIAPPKHFMHKALLAGVNFYVS--IIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|148980392|ref|ZP_01816035.1| ABC-type amino acid transport system, permease component
           [Vibrionales bacterium SWAT-3]
 gi|145961264|gb|EDK26576.1| ABC-type amino acid transport system, permease component
           [Vibrionales bacterium SWAT-3]
          Length = 366

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 120/266 (45%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  L       ++ + +  +  +  ++   ++    GL            + +   ++GI
Sbjct: 111 VALLAYEKTPKRTWIWLFFVNIYPFIIAGLLYGGVFGLEVVDTHKWGGLLVTLIIALVGI 170

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V+SL    A  L R       +++  +YI  +    L T++ +A           +    
Sbjct: 171 VVSLPIGVALALGRRSEMPIIRSICTVYIEIWRGVPLITVLFMA----------SVMLPL 220

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   + + +     + +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 221 FLTAGSETDKLFRALVGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMGLII 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    
Sbjct: 281 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVAL 340

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  ++    K+
Sbjct: 341 VFWVFCFGMSRYSIWLENRLHTGHKR 366



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 7/197 (3%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG  +  GR S   ++  IC VY+E++R +P L+ + F+   
Sbjct: 158 GLLVTLIIALVGIVVSLPIGVALALGRRSEMPIIRSICTVYIEIWRGVP-LITVLFMASV 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLFATR 206
           +L +           F   +     S   +       +             + L+ +   
Sbjct: 217 MLPLFLTAGSETDKLFRALVGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKM 276

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPE 265
                 +     +P +  +   +F   +LVLI   +  L   +       ++G +T S  
Sbjct: 277 GLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYV 336

Query: 266 FMSLYIALSCYTAAFIA 282
           F++L   + C+  +  +
Sbjct: 337 FVALVFWVFCFGMSRYS 353


>gi|327478628|gb|AEA81938.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 219

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 14/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L        T   I +  F + +VL LF   + R    +         I 
Sbjct: 3   FFDWEFAREILPRLLDASLTTIGIALAGFAIAVVLGLFL-AIGRRSRHRWLSWPVTGLIE 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I   P L+ +   + +           F           +  I ++ + A + AE+ 
Sbjct: 62  F--IRSTPLLIQVYFLFYV-----------FPNYGLNLSAMQAGIIGIALHYACYTAEVY 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL AVPR Q EA  AL +    A R V+LPQA+R ++P L +  +++LK++ +  A+ 
Sbjct: 109 RAGLDAVPRSQWEAVTALNMKPWTAYRDVILPQALRPVLPALGNYLISILKDTPVLSAIT 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +++     I +++ + +E I +    +L LS+ +A  + RL  ++ L  
Sbjct: 169 VVEIMQRAKNIGSESFRYLEPITMVGVFFLILSLGLAWCVRRLEHRMELAR 219



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  +A +G   A ++G  +  GR S ++ ++W     +E  R+ P L+ ++FL
Sbjct: 16  LLDASLTTIGIALAGFAIAVVLGLFLAIGRRSRHRWLSWPVTGLIEFIRSTPLLIQVYFL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +    +             G+ L+ 
Sbjct: 76  FYVFPNYGLNLSAMQAGIIGIALHY 100


>gi|327396675|dbj|BAK14096.1| probable amino-acid ABC transporter permease protein YckA [Pantoea
           ananatis AJ13355]
          Length = 216

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 1/211 (0%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
              ++  +++   + G  ++++ T LS       G       +  F I   P  V+I + 
Sbjct: 1   MDWSSIHVYLPFLLQGAEMTIYITILSLLISTPLGLVFAAAKMCPFKIISWPVSVIINIT 60

Query: 242 YQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
             L     +    F F         F +  + ++   + F+AEI RSG+ +V RGQ+EAA
Sbjct: 61  RALPMIVVLFYTYFVFPDIGITLTSFQASVVGIAFCFSTFLAEIFRSGIESVDRGQLEAA 120

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ++G++  KA R V+LPQA    +PP ++  + +LK+S+LA  +   ++   G  +   T
Sbjct: 121 RSMGMSFFKAMRRVILPQAFHVALPPYSNTLVMMLKDSALASTIAVTEMTRQGQLLAAST 180

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                +  +   +YL+L + +  F   L  +
Sbjct: 181 FDNTTVYTLVALLYLTLCMPLLAFTKHLENR 211


>gi|295697439|ref|YP_003590677.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295413041|gb|ADG07533.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 232

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 8/219 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    L +  +   F  +F +G++++L      R F ++  + +   ++   LI G P L
Sbjct: 18  LEALWLIIVLSVCAFALAFGVGMLIAL-----GRIFGKRPIQTVLTAFLE--LIRGTPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V +   Y +  +        +I    ++   F +  I L      +++E+ RS L+A+ +
Sbjct: 71  VQLLYVYYVIPEIFTRVIDLWIPDYHMNLSAFAASVIGLGINYGCYLSEVFRSSLLAIDK 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EA +ALG THR+A   +++PQ+    +PPL + +  +LK++SL   +   +++    
Sbjct: 131 GQIEACLALGYTHRQAMFHIVIPQSFLISLPPLGNYFNAMLKDTSLCAFITLGEIILKTQ 190

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +QT   IE   I   IYL +SI +   +  L  ++ 
Sbjct: 191 AYASQTFLTIESYTIAAGIYLIVSIPLGQAVRLLERRLR 229



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 31/79 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L        L+      A  +G L+  GR+   + +  +   ++E+ R  P LV + ++
Sbjct: 17  LLEALWLIIVLSVCAFALAFGVGMLIALGRIFGKRPIQTVLTAFLELIRGTPLLVQLLYV 76

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           Y  +  +        +  +
Sbjct: 77  YYVIPEIFTRVIDLWIPDY 95


>gi|226310806|ref|YP_002770700.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
 gi|226093754|dbj|BAH42196.1| glutamine ABC transporter permease protein [Brevibacillus brevis
           NBRC 100599]
          Length = 216

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+       VFSF + I++ +         + K      +L     LI  LP L
Sbjct: 16  LEGFLVTLQVAFLSIVFSFTIAIIVGVL-------RYAKIPGVSQVLGTIVELIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F          +F +  +AL  + AA ++EIVRSGL +V +G
Sbjct: 69  LIIFFTY-----------FALPEVGIKLDKFWAAVLALVIFEAAMLSEIVRSGLTSVEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GL + +    V+LPQA+R ++PP+ SQ+++LLK++SLAV +   +L++    
Sbjct: 118 QIEAARSSGLNYVQTLWHVVLPQALRRMVPPIVSQFISLLKDTSLAVVIALPELMNHAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I  +     I   L+   +Y  ++  +++   RL  K A
Sbjct: 178 INGRNVNYVIPTFLMVAVMYFVVNYALSVVSKRLENKHA 216



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 42/80 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+ T +L GF+ T  +AF  ++ +  I  +VG  R +    V+ +    VE+ RN+P L+
Sbjct: 10  SHLTFLLEGFLVTLQVAFLSIVFSFTIAIIVGVLRYAKIPGVSQVLGTIVELIRNLPLLL 69

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
           +IFF Y ++  V    D   
Sbjct: 70  IIFFTYFALPEVGIKLDKFW 89


>gi|170720285|ref|YP_001747973.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169758288|gb|ACA71604.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 248

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      ++ + +LG +L +      R    +    +   Y+  F    +P
Sbjct: 24  WYITGLGWTIAIAIAAWIIALLLGSLLGVM-----RTVPNRLVSGIATAYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L ++     +  +   +S+ I L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPEGLQEWFKQDLNPTTSALISVVICLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  AA A+G +  +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPRGQEAAARAMGFSLPQIYNNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMGLMLLMRLVEKKVAV 239



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A +  I A ++G+L+G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWYITGLGWTIAIAIAAWIIALLLGSLLGVMRTVPNRLVSGIATAYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP          
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQEWFKQD 103


>gi|83746635|ref|ZP_00943685.1| GltJ [Ralstonia solanacearum UW551]
 gi|207727925|ref|YP_002256319.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           MolK2]
 gi|207742330|ref|YP_002258722.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           IPO1609]
 gi|83726769|gb|EAP73897.1| GltJ [Ralstonia solanacearum UW551]
 gi|206591167|emb|CAQ56779.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           MolK2]
 gi|206593720|emb|CAQ60647.1| glutamate/aspartate transmembrane protein [Ralstonia solanacearum
           IPO1609]
          Length = 242

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 4/236 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +  V       N   L +    + T   + + S+++ +VL      L R    K    
Sbjct: 4   HWNWDVFFAEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVL-RTVPNKVLSG 62

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   Y+  F    +P +V + + Y +  +  V G       +  +  F+   + L  +TA
Sbjct: 63  LATAYVELF--RNIPLIVQLFIWYFVMPEL-VPGGDYIKQMNPTTAMFLCAMLCLGTFTA 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP A R I+PPLTS++LN+ KNS
Sbjct: 120 ARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M  + A+  L
Sbjct: 180 AVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRL 235



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 46/86 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A ++G+++G  R   NK+++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPNKVLSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            +V +F  Y  +  ++P  D+   + 
Sbjct: 76  LIVQLFIWYFVMPELVPGGDYIKQMN 101


>gi|107100791|ref|ZP_01364709.1| hypothetical protein PaerPA_01001819 [Pseudomonas aeruginosa PACS2]
 gi|296390283|ref|ZP_06879758.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
          Length = 221

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 7/219 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      M    K+ V   + G+ L      L R  H K    +   Y++ F      ++
Sbjct: 10  LPSLWEGMLMTLKLMVLGVLGGVALGTVL-ALMRLSHSKLLSNIAGFYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +F  P + ++   G  T    F S  +A   + AA+  EIVR+G+ A+P+G
Sbjct: 64  PLLLVITWFYFAVPFILRW-ITGEDTPVGAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+T+ +  RLV+LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 123 QMGAAQALGMTYGQTMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  GQA E ++    +Y  +S   +  + RL  ++ +
Sbjct: 183 RGDIIGQANEFLIFAGLVYFVVSFTASFAVKRLQKRLTV 221



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L   G++    +GT++   RLS +KL++ I   YV  FR+IP L+VI + 
Sbjct: 13  LWEGMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  +L                               
Sbjct: 73  YFAVPFILRWITGEDTPVGAFTSCLVAFMMFEAAYYCEI 111


>gi|84393753|ref|ZP_00992501.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84375615|gb|EAP92514.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 225

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T A +   + ++G+ +++    ++R+       A    +I  F   G P L
Sbjct: 10  LPIYLSGLWTTAWMVCVALIIGLCVAIPL-AIARNSPNMLINAPAWSFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  K  R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSTPKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y+ L+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMGLTFIIIAIFKFAEKRF 217



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 35/102 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T W+    +I    +   +   R S N L+      ++  FR  P LV ++ +
Sbjct: 13  YLSGLWTTAWMVCVALIIGLCVAIPLAIARNSPNMLINAPAWSFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|271964465|ref|YP_003338661.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
 gi|270507640|gb|ACZ85918.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptosporangium roseum DSM 43021]
          Length = 282

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 15/192 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +  + + + YI  F            +   + F    L  F   GG+        
Sbjct: 102 RMSSVRPYRWIAIAYIEIFRGLPAL-----LIFLLILFLPLALPGFEVPGGTYGQ----- 151

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+   +A++AE +R+GL AVP+GQMEAA +LG++H +A   +++PQA+R +IPP T
Sbjct: 152 GILGLTIVGSAYMAETLRAGLQAVPKGQMEAARSLGMSHARAMTTIVIPQAVRIVIPPTT 211

Query: 329 SQYLNLLKNSSLAVAVGF----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           +Q+++LLK+SSL + +G      +L   G  + + T      IL+    YL ++I +   
Sbjct: 212 NQFVSLLKDSSLVLFLGVSGEYVELTKFGNDMAS-TFANATPILVVGVTYLLVTIPLGYL 270

Query: 385 MNRLNAKIALKE 396
            +RL  + A   
Sbjct: 271 ASRLEKRQARGR 282


>gi|239618043|ref|YP_002941365.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
 gi|239506874|gb|ACR80361.1| polar amino acid ABC transporter, inner membrane subunit [Kosmotoga
           olearia TBF 19.5.1]
          Length = 244

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 19/254 (7%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            LV+   L    +       +       +            T+  +      S ++G ++
Sbjct: 9   LLVITVTLIFFSIYASLSKVYPFNWSVILKYRRLFFDGLMTTLRLSVTALGLSLLVGFII 68

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +LF     R       + L ++Y+  F    +P LV+I L Y              IG  
Sbjct: 69  ALF-----RTSRILVLEELGMIYVWFF--RNMPLLVIILLIYY------------GIGSV 109

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  I+L+ +  A++ EI R+G+ AVPRG++EA  ALG+   +    ++ P+A+
Sbjct: 110 VAINRFWAGVISLALFEGAYVGEIFRAGIEAVPRGEIEAGEALGMYKYQIMGSIIFPRAL 169

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  IPPL  Q ++L+K+SSL   +   DL      +  QT  ++E  L+    YL+++ +
Sbjct: 170 RISIPPLVGQMVSLVKDSSLVSVIALGDLTMRARQVGTQTLASLEAYLVLAGFYLAITSL 229

Query: 381 IALFMNRLNAKIAL 394
           ++L    L  ++A+
Sbjct: 230 LSLVGRYLERRLAI 243



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 38/78 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G + T  L+ + +  + ++G ++   R S   ++  +  +YV  FRN+P LV+
Sbjct: 39  YRRLFFDGLMTTLRLSVTALGLSLLVGFIIALFRTSRILVLEELGMIYVWFFRNMPLLVI 98

Query: 145 IFFLYKSVLSVLPIPDHS 162
           I  +Y  + SV+ I    
Sbjct: 99  ILLIYYGIGSVVAINRFW 116


>gi|188534297|ref|YP_001908094.1| arginine transporter permease subunit ArtQ [Erwinia tasmaniensis
           Et1/99]
 gi|188029339|emb|CAO97216.1| Arginine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 238

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 102/220 (46%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFH------EKTGKALPLLYISTFLIFGLPTLVL- 237
                 +   +L +V +++ +   R             +ALP + +  F+ FG   L+L 
Sbjct: 17  LAVCALIAGLMLAMVFAVWESARWRPLAWVGTGLVTLFRALPEILVVLFIYFGASQLLLT 76

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           ++  + L+     +     I    VSP F+   IAL+   +++ ++ +R  L AVP+GQ 
Sbjct: 77  LSDGFTLNLALVQIPVQVNIENFDVSP-FLCGVIALAILYSSYASQTLRGALKAVPQGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L   +   D++    +I 
Sbjct: 136 ESGQALGMKKSAIFVRLIVPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     ++   IYL +++     + R+  +    E+
Sbjct: 196 TRTQEPFTWYVVAAAIYLLITLFSQQVLKRIELRTTRFER 235



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 2/112 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A   G   T  LA   +I   ++  +      +  + +AW+    V +FR +P ++V
Sbjct: 5   YTLASAAGM--TVGLAVCALIAGLMLAMVFAVWESARWRPLAWVGTGLVTLFRALPEILV 62

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           + F+Y     +L        L   +      ++     +       +   +L
Sbjct: 63  VLFIYFGASQLLLTLSDGFTLNLALVQIPVQVNIENFDVSPFLCGVIALAIL 114


>gi|317494653|ref|ZP_07953065.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917255|gb|EFV38602.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 246

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 118/231 (51%), Gaps = 8/231 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYIST 226
           +   S   +T+  +A   V S +LG++L+      SR        +    +  PLL    
Sbjct: 17  HWLWSGFLITLVISACTIVLSTILGLILAALRDSSSRWLSLPVIAYSSVFRNTPLLVQLF 76

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F  FG   L+   +   L  + P    F+    +  S EF++  + L+ Y+AAFI+E +R
Sbjct: 77  FWYFGAGQLLPSVVMQWL--NTPHEWMFDGWTIAWPSFEFLAGLVGLTLYSAAFISEEIR 134

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  V  GQ +A+ ALGL+  ++ R V+LPQA++  +PPL  QY+N++KNSSL +A+G 
Sbjct: 135 AGIRGVASGQKQASQALGLSLWQSMRYVVLPQAVKIALPPLLGQYMNIIKNSSLTMAIGV 194

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+L      +  +T +  +   +   +Y+ +  ++  +      +  ++E+
Sbjct: 195 AELSYASRQVETETLKTFQAFGVATLLYVLIIALMEGWGMWYQQRRRMQER 245



 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 4/171 (2%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q    +     Y   +  GF+ T  ++   ++ +TI+G ++ A R S+++ ++     Y
Sbjct: 3   GQSFYDFILAPQYLHWLWSGFLITLVISACTIVLSTILGLILAALRDSSSRWLSLPVIAY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
             VFRN P LV +FF Y     +LP       L         G +    + +  A +   
Sbjct: 63  SSVFRNTPLLVQLFFWYFGAGQLLPSVVMQW-LNTPHEWMFDGWTIAWPSFEFLAGLVGL 121

Query: 193 SFVLGIVLS---LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +      +S       R      ++  +AL L    +     LP  V IAL
Sbjct: 122 TLYSAAFISEEIRAGIRGVASGQKQASQALGLSLWQSMRYVVLPQAVKIAL 172


>gi|260778550|ref|ZP_05887442.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604714|gb|EEX31009.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 365

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       V S  +G+
Sbjct: 118 TPKRLWIWLFFVNIYPFIIAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 ALAL-----GRRSEMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFLA 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++LPQ
Sbjct: 223 EGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLIVLPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG  +  GR S   ++  IC VY+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVALALGRRSEMPIIRSICTVYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSV 155
           +   
Sbjct: 217 LPLF 220


>gi|261404398|ref|YP_003240639.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|329929701|ref|ZP_08283387.1| putative glutamine ABC transporter, permease protein GlnM
           [Paenibacillus sp. HGF5]
 gi|261280861|gb|ACX62832.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|328935918|gb|EGG32377.1| putative glutamine ABC transporter, permease protein GlnM
           [Paenibacillus sp. HGF5]
          Length = 219

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 16/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---TRLSRHFHEKTGKALPLLYIST 226
             +   L              + + +LG++ SL       + R    +  KA+  +Y+  
Sbjct: 3   LWDFNILVEHWDQFMAGLGQTILASLLGLIGSLVLGTFIAIMRIAPFRVLKAIGTIYVEF 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                L  +V            PV               F S  + L  YTAAFIAE +R
Sbjct: 63  IRNIPLLVVVFFFFLGLPALGIPV-------------DPFTSGTLGLMVYTAAFIAEAIR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP GQ EAA + GL++ +  R ++LPQA++ ++P + +Q +NL+KNSS+   +  
Sbjct: 110 AGIQAVPSGQSEAARSSGLSYIQNMRYIILPQAVKIVLPAIGNQLINLVKNSSVLGVIAG 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            DL+     I   T + I +       YL L++ ++L ++ +  + A  
Sbjct: 170 LDLMYYADLINLSTFKGIPVYTFVALFYLLLTVPLSLAVHYMERRFARS 218



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 45/103 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    + G   T   +  G+I + ++GT +   R++  +++  I  +YVE  RNIP LVV
Sbjct: 12  HWDQFMAGLGQTILASLLGLIGSLVLGTFIAIMRIAPFRVLKAIGTIYVEFIRNIPLLVV 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +FF +  + ++    D       G+ +         +     A
Sbjct: 72  VFFFFLGLPALGIPVDPFTSGTLGLMVYTAAFIAEAIRAGIQA 114


>gi|83643771|ref|YP_432206.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83631814|gb|ABC27781.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 225

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 12/223 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTFLI 229
            +          +   A+I + + +LG +L++ A  +         + +    Y     I
Sbjct: 6   WDWDFTWEVLPDLLNAAQITLAATLLGSLLAIAAGLMLSMLRRSALRWISWPTYWVVEFI 65

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P LV I   Y       V+ +F             +  +AL  +  A+++E+ RSG+
Sbjct: 66  RSTPLLVQIFFLYY------VMPEFG-----VSMSPMTTGVLALGAHYGAYLSEVFRSGI 114

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             V +GQ EAA AL L+     R V+LPQA+R++IP   +  + + K +    A+   ++
Sbjct: 115 DGVEKGQWEAARALNLSQLTTYRDVILPQALRAMIPATGNYIIAMFKETPQLSAITLLEM 174

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +     + ++  + +E   +   +YL+ SI+ AL ++++  + 
Sbjct: 175 LQTAKILGSENFRYLEPFTLVGLLYLAFSIVAALGVHQVERRF 217



 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 76  IVPYTSDSSYATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           ++    D  +   +L   +N    T      G + A   G ++   R SA + ++W    
Sbjct: 1   MIELNWDWDFTWEVLPDLLNAAQITLAATLLGSLLAIAAGLMLSMLRRSALRWISWPTYW 60

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            VE  R+ P LV IFFLY  +          
Sbjct: 61  VVEFIRSTPLLVQIFFLYYVMPEFGVSMSPM 91


>gi|300705159|ref|YP_003746762.1| glutamate/aspartate ABC transporter membrane component [Ralstonia
           solanacearum CFBP2957]
 gi|299072823|emb|CBJ44179.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CFBP2957]
          Length = 227

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 6/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +N   L      M  + +I   + V+GIV       + R    K  +    
Sbjct: 1   MAYQFDFTSINADNLRVLGEGMVLSLEITATAIVVGIVWGTLL-AMMRLSGIKPLQWFGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y++ F       LV++ L + L   + +   FN    + +     S  +A + + AA+ 
Sbjct: 60  GYVNLFRSIP---LVMVLLWFFLIVPQVLQKIFNLSPATDMR--MTSALVAFALFEAAYY 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L +Q + L +++SL 
Sbjct: 115 SEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLV 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +D  +    I  + G+ +E++L   F+Y  +    ++ + RL  K+
Sbjct: 175 YVSALSDFFTQAYNIGERDGRIVELLLFAGFVYFVVCFGASVLVKRLQKKV 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 39/87 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G V +  +  + ++   + GTL+   RLS  K + W  + YV +FR+IP ++V+
Sbjct: 15  LRVLGEGMVLSLEITATAIVVGIVWGTLLAMMRLSGIKPLQWFGQGYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            + +  V  VL    +          +
Sbjct: 75  LWFFLIVPQVLQKIFNLSPATDMRMTS 101


>gi|118470385|ref|YP_887852.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171672|gb|ABK72568.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mycobacterium smegmatis str. MC2 155]
          Length = 226

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                ++ +    + +VL LF   ++   + +      L       + G P LV I   Y
Sbjct: 27  FWLTIRLTIVGMAIALVLGLF---VAVIRYPRIPVVSQLFDFYVLFVRGTPLLVQIFAVY 83

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F           F +  + L    +A+ AE+ R+G+ A+P+GQ EAA A
Sbjct: 84  -----------FILPEYGITLSNFTAGVLVLGINYSAYTAEVYRAGIEALPKGQWEAATA 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L L+  +    ++LPQ++  IIP L +  + + K+++L  A+G  ++++   +I   TGQ
Sbjct: 133 LNLSRARTWSRIVLPQSIAMIIPVLGNYLIQMFKDTALLYAIGTLEVLTTARSIGQSTGQ 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +E + I   +YL +S + +L + ++  + A
Sbjct: 193 FLEPLTIAGLMYLIISYVSSLAIRQMERRYA 223



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L   GM  A ++G  V   R     +V+ +   YV   R  P LV IF +
Sbjct: 23  LLDAFWLTIRLTIVGMAIALVLGLFVAVIRYPRIPVVSQLFDFYVLFVRGTPLLVQIFAV 82

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +        +       + +N    +         A 
Sbjct: 83  YFILPEYGITLSNFTAGVLVLGINYSAYTAEVYRAGIEAL 122


>gi|77460512|ref|YP_350019.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77384515|gb|ABA76028.1| L-arginine ABC transporter membrane protein / L-ornithine ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 229

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P   +    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPMLGYDDYIDLNP-LAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++  +    VL+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSSFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVR 225



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     +L      +     + LN 
Sbjct: 65  ILLIFYGGQDLLNRVAPMLGYDDYIDLNP 93


>gi|306825705|ref|ZP_07459044.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432066|gb|EFM35043.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 225

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 106/223 (47%), Gaps = 11/223 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
                 +              + + SF+L +VL +    LS   H+   + L  +++   
Sbjct: 6   SWIAYFQDFGQFFNGFLFTLALAIGSFILAMVLGIIFGVLSTSKHQ-ILRILARIFVEF- 63

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
                P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RS
Sbjct: 64  -YQNTPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRS 114

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   
Sbjct: 115 GIQSIPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGV 174

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           DL+ V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 175 DLMFVTKSWSALYGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G + G    S ++++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|296454519|ref|YP_003661662.1| polar amino acid ABC transporter inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
 gi|296183950|gb|ADH00832.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. longum JDM301]
          Length = 220

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF LG++L++    L R         +   YI  F   G P LV + + +  
Sbjct: 23  VTIPLTLISFALGLILAIVV-ALVRVAKVPVASQIAWFYIWVF--RGTPLLVQLFVIF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P   S  IA S    A+ AE +R  ++AVP+GQ+EA +A  
Sbjct: 78  ---------FGLPSVGITIPALPSAVIAFSLNVGAYAAETLRGAILAVPKGQLEAGLAAN 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +    R ++LPQA RS  P L + ++ L+K++SLA  +   ++      I+    + +
Sbjct: 129 MPYVTIMRRIILPQAFRSAFPALFNSFIALVKDTSLAANITVVEMFMTAQRIVAIYYEPL 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + +    IYL    ++    +    K+
Sbjct: 189 ALYIEVGLIYLLFCTLLGWLQDYCEKKL 216



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+A  ++ G   T  L         I+  +V   R++   + + I   Y+ VFR  P L
Sbjct: 11  DSFAKLLIPGITVTIPLTLISFALGLILAIVVALVRVAKVPVASQIAWFYIWVFRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV               LN
Sbjct: 71  VQLFVIFFGLPSVGITIPALPSAVIAFSLN 100


>gi|291166921|gb|EFE28967.1| amino acid ABC transporter, permease protein [Filifactor alocis
           ATCC 35896]
          Length = 214

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 104/221 (47%), Gaps = 12/221 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           ++     + T   +F  + +  I L L    ++     K      ++    +++   P L
Sbjct: 6   ITLSYQGLLTTLSVFFSTLLCSIPLGLL---IAPLRDSKIPWVKTIVKQYIYVMRSTPLL 62

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +     +      PV+        S   P F ++++A +   AA+ AEI R G+ ++P+G
Sbjct: 63  LQTMFLFFGLPLVPVV--------SITLPRFTAIWLAFTLNYAAYFAEIFRGGIQSIPKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q +AA  LGL+ +   R +++PQ ++  +P + ++ +NLLK++SL   +G +D++ V  +
Sbjct: 115 QYQAAKVLGLSKKNTFRYIIVPQVIKITLPSVANEVINLLKDTSLVYILGMSDILKVAKS 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + + T  +    L    +Y  L  ++   + R+  K A  E
Sbjct: 175 V-SNTYASFVPYLFVACLYFILVFLLTFALERIEEKFAYYE 214



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 31/66 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  + FS ++ +  +G L+   R S    V  I + Y+ V R+ P L+   FL+  
Sbjct: 12  GLLTTLSVFFSTLLCSIPLGLLIAPLRDSKIPWVKTIVKQYIYVMRSTPLLLQTMFLFFG 71

Query: 152 VLSVLP 157
           +  V  
Sbjct: 72  LPLVPV 77


>gi|152987622|ref|YP_001349398.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150962780|gb|ABR84805.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 248

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+  +   ++ +  LG +L +      R    +    +   Y+  F    +P
Sbjct: 24  WYIAGLGWTIAISLVGWIIALALGSLLGVM-----RTVPNRLVSGIATAYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + + Y L  D     L  +     +  +  ++S+ I L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFIWYFLVPDLLPEGLQTWFKQDLNPTTSAYLSVVICLGLFTAARVCEQVRTGIQA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ  AA A+G    +  R VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIMRLVERKVAV 239



 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  ++  G I A  +G+L+G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWYIAGLGWTIAISLVGWIIALALGSLLGVMRTVPNRLVSGIATAYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP    +     
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQTWFKQD 103


>gi|18313023|ref|NP_559690.1| glutamine transport system permease protein, putative [Pyrobaculum
           aerophilum str. IM2]
 gi|18160525|gb|AAL63872.1| glutamine transport system permease protein, putative [Pyrobaculum
           aerophilum str. IM2]
          Length = 229

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 88/225 (39%), Gaps = 12/225 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L +    + T   + + SF +G+ L      L R F  K    L   Y+  F   G
Sbjct: 6   YLEALWYVVGGIPTTMSLALLSFAIGLALGSILL-LVRFFLPKPLPWLASAYVEAF--RG 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I + Y               G       F +  IAL   +AA+ AEI RS + A
Sbjct: 63  TPLLVQIFIVYFGVGGY-------LKGYGINIDPFTAGVIALGLNSAAYQAEIFRSAVQA 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF--ADL 349
           +P  Q   A A   T  +  R ++LPQA+R  +P L ++ + L+K+SSL   +G    D+
Sbjct: 116 IPVEQYLTAEAYAFTKTQTFRYIILPQALRIALPALMNELVLLIKDSSLVAVIGVTPPDI 175

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                          E  +    +Y  +   +    + +  K A+
Sbjct: 176 FRRADYYSASKFAYFEAYMAAATVYFLICYAMVKISHYIERKYAI 220



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  LA         +G+++   R    K + W+   YVE FR  P LV I
Sbjct: 10  LWYVVGGIPTTMSLALLSFAIGLALGSILLLVRFFLPKPLPWLASAYVEAFRGTPLLVQI 69

Query: 146 FFLYKSV 152
           F +Y  V
Sbjct: 70  FIVYFGV 76


>gi|300705160|ref|YP_003746763.1| glutamate/aspartate ABC transporter membrane component [Ralstonia
           solanacearum CFBP2957]
 gi|299072824|emb|CBJ44180.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CFBP2957]
          Length = 242

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 4/236 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +  V       N   L +    + T   + + S+++ +VL      L R    K    
Sbjct: 4   HWNWDVFFAEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVL-RTVPNKVLSG 62

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   Y+  F    +P +V + + Y +  +  V G       +  +  F+   + L  +TA
Sbjct: 63  LATAYVELF--RNIPLIVQLFIWYFVMPEL-VPGGDYIKQMNPTTAMFLCAMLCLGTFTA 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E VRSG+ ++PRGQ  A +A+G T  +  R ++LP A R I+PPLTS++LN+ KNS
Sbjct: 120 ARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHIMLPMAFRIIVPPLTSEFLNIFKNS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M  + A+  L
Sbjct: 180 AVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRL 235



 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 46/86 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A ++G+++G  R   NK+++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPNKVLSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            +V +F  Y  +  ++P  D+   + 
Sbjct: 76  LIVQLFIWYFVMPELVPGGDYIKQMN 101


>gi|157151612|ref|YP_001449894.1| amino acid ABC transporter permease protein [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157076406|gb|ABV11089.1| amino acid ABC transporter permease protein [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 269

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 10/260 (3%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N   +++    Y+ ++  +P         F +      L      + T   + +   + G
Sbjct: 2   NASLVILASNWYQELMKSIPDGQ-----NFSLRSVFDALPRIIEKLPTTLFLTLGGALFG 56

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQ-FN 255
           +VL+L    + +    K    +  L++S   + G P LV + L  Y +     V+ Q F 
Sbjct: 57  LVLALL-FAIVKINRVKVLYPIQALFVSF--LRGTPILVQLMLTYYGIPIALKVINQRFG 113

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                   P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ +  R V+
Sbjct: 114 TAFNINAIPALVFAVVAFAFNEAAYASETIRAAILSVSEGEIEAARSLGMTNTQVYRRVI 173

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +P A     P L +  + L K +SLA + G  ++ +    +     +  E  +    +Y 
Sbjct: 174 IPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEVFAQAQILGGSDYRYFERFISVALVYW 233

Query: 376 SLSIMIALFMNRLNAKIALK 395
            ++IMI  F   +  K+A++
Sbjct: 234 VVNIMIEQFGRFIERKMAIQ 253


>gi|315222025|ref|ZP_07863936.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315188991|gb|EFU22695.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 269

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 91/206 (44%), Gaps = 9/206 (4%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            F  +L ++ ++      +  +       PL       + G P LV + L Y        
Sbjct: 54  FFGLILALIFAIVKINRVKVLY-------PLQAFFVSFLRGTPVLVQLMLTYYGIPLLLK 106

Query: 251 LGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F  G  ++  P ++   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ 
Sbjct: 107 AINLRFGTGLNINAIPAYLFAIVAFAFNEAAYASETIRAAILSVDAGEIEAARSLGMTNG 166

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R V++P A     P L +  + L K +SLA + G  ++ +    +     +  E  +
Sbjct: 167 QVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEIFAQAQILGGADYRYFERFI 226

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               +Y  ++I+I      +  ++A+
Sbjct: 227 SVALVYWGVNIVIEALGRFIEKRMAI 252


>gi|289671692|ref|ZP_06492582.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 237

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +       +  +   + I L L + RL+ + + +   A  + Y        +
Sbjct: 19  YAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAGYVSYH-----RNV 73

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   I  +  S E++   IAL    AA+ +E +RSGL A
Sbjct: 74  PTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 130

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 131 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 190

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 191 ATREVENYTFRTFEAYLVATVVYLAIS 217



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LA      A  I  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 19  YAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 79  LMLWYFGIPTLLSESTQIWLANYS 102


>gi|229591450|ref|YP_002873569.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229363316|emb|CAY50435.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 233

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 7/195 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ +F+++L +VL+L    + R    K    L   Y+S      +PTLV + L Y  
Sbjct: 25  MTLQLALFAWLLAMVLALTLVTV-RLTGNKLADRLVAGYVS--YHRNVPTLVQLMLWY-- 79

Query: 245 HFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            F  P +L +   +  +  + E++   IAL    AA+  E +RSGL A+P GQ EA+ AL
Sbjct: 80  -FGVPTLLSESAQLWLANHNTEYLFSVIALGLCQAAYFCEDIRSGLRAIPAGQTEASRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + ++ R V+LPQ +R+ +P L +  + L KN+SLA+A+G  +L      + N T + 
Sbjct: 139 GLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLAMAIGVVELTYASREVENYTFRT 198

Query: 364 IEIILIWMFIYLSLS 378
            E  L+    YL  S
Sbjct: 199 FESYLVATVFYLVFS 213



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 34/79 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LA    + A ++   +   RL+ NKL   +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIEMTLQLALFAWLLAMVLALTLVTVRLTGNKLADRLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           +   Y  V ++L       
Sbjct: 75  LMLWYFGVPTLLSESAQLW 93


>gi|145633092|ref|ZP_01788824.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           3655]
 gi|144986318|gb|EDJ92897.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           3655]
          Length = 221

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F     A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVFA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|16079988|ref|NP_390814.1| sulfur-containing amino acid ABC transporter permease [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221310880|ref|ZP_03592727.1| hypothetical protein Bsubs1_16026 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315205|ref|ZP_03597010.1| hypothetical protein BsubsN3_15922 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320123|ref|ZP_03601417.1| hypothetical protein BsubsJ_15838 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324405|ref|ZP_03605699.1| hypothetical protein BsubsS_15997 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|7674447|sp|O34315|TCYL_BACSU RecName: Full=L-cystine transport system permease protein tcyL
 gi|2293249|gb|AAC00327.1| amino acid transporter [Bacillus subtilis]
 gi|2635401|emb|CAB14896.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 239

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F M +    +   T  +     I   S + G VL LF   L R ++      L  +YIS 
Sbjct: 5   FDMNMIGDFVPTLTAYLPVTLYILTLSLLFGFVLGLFL-ALPRIYNIPIVNQLAKVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P F +     +   AA  AEI+R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALTGLIGIDTSKMDP-FYAAVATYALSNAAAAAEIIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V +GQ EAA ++GL+  +A R ++LPQA+    P + +  ++ LK++SLA ++G 
Sbjct: 118 AGVGSVDKGQTEAAYSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  ++E+ +    +Y +++++   F      +I   + +
Sbjct: 178 MDMSGRGQTLITSSNHSLEVYIALSIVYYAVAVLFEWFFRVAEKRIKKNQTR 229



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 32/75 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    ++   ++G  +   R+    +V  + +VY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILTLSLLFGFVLGLFLALPRIYNIPIVNQLAKVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             +           +
Sbjct: 84  TGLIGIDTSKMDPFY 98


>gi|329124092|ref|ZP_08252639.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus aegyptius ATCC 11116]
 gi|327467517|gb|EGF13015.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Haemophilus aegyptius ATCC 11116]
          Length = 221

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 17/182 (9%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            + LP + +   + FG   LV +     + F                   F     ALS 
Sbjct: 54  LRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVFALSL 96

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L LL
Sbjct: 97  IFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWLVLL 156

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  +    
Sbjct: 157 KDTALVSLIGVDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRFTRF 216

Query: 396 EK 397
           E+
Sbjct: 217 ER 218


>gi|301066996|ref|YP_003789019.1| amino acid ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|300439403|gb|ADK19169.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei str. Zhang]
          Length = 214

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 10/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L+    T  +     + S +L ++ SL    L         K+L ++      I  
Sbjct: 1   MWSILTNNWGTFMSGVGYTLASSILALIGSLIVGTLFALLEISPFKSLRVIGRIYVEIVR 60

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              L++I L + +     ++ QF           F +  I L  YT+AFIAE VR+G+ A
Sbjct: 61  NIPLLVITLAFYV-----IVPQF-----IVKIDGFTAGTIGLLIYTSAFIAETVRAGIEA 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQME A ++G+T+ +A   ++ PQA + +IPPL +Q++NL+KNSS+   V   DL+ 
Sbjct: 111 VPGGQMEGARSIGMTYNQAMIQIIFPQAFKMVIPPLGNQFINLVKNSSVLAFVAGFDLMY 170

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G  I   T    +  LI    YL L++ ++  M  L  K
Sbjct: 171 QGKLIAATTFSTFDTYLIVGIFYLVLTMPLSYLMRYLEKK 210



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               + G   T   +   +I + I+GTL     +S  K +  I R+YVE+ RNIP LV+ 
Sbjct: 9   WGTFMSGVGYTLASSILALIGSLIVGTLFALLEISPFKSLRVIGRIYVEIVRNIPLLVIT 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              Y  V   +   D       G+ +        T+     A
Sbjct: 69  LAFYVIVPQFIVKIDGFTAGTIGLLIYTSAFIAETVRAGIEA 110


>gi|152996346|ref|YP_001341181.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Marinomonas
           sp. MWYL1]
 gi|150837270|gb|ABR71246.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Marinomonas sp. MWYL1]
          Length = 225

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 98/228 (42%), Gaps = 12/228 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYI 224
             G   +          + + AK+ + + +LG +L++    +         + L +  Y 
Sbjct: 1   MNGFHWDWAFTWEVLPMILSAAKVTLLATLLGSILAIVMGLVFALLRRSKSRTLCISTYW 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               +   P LV I   Y       V+ +F             +   AL  +  A+++E+
Sbjct: 61  IVEFVRSTPLLVQIFFLYY------VMPEFG-----VSMSPLATGVFALGLHYGAYLSEV 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+  + +GQ EAA AL LT     + ++LPQA+R +IP   +  + + K +    A+
Sbjct: 110 FRSGIDGIEKGQWEAARALNLTIIDTYKDIVLPQAIRPMIPATGNYIIAMFKETPQLSAI 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +++ +   I ++  + +E   +   +YL  S++ A  ++++  + 
Sbjct: 170 TLLEMLQMAKIIGSENFRYLEPFTLVGILYLVFSLLAAYGIHQVERRF 217



 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         IL     T      G I A ++G +    R S ++ +       VE  R
Sbjct: 7   DWAFTWEVLPMILSAAKVTLLATLLGSILAIVMGLVFALLRRSKSRTLCISTYWIVEFVR 66

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           + P LV IFFLY  +              F +
Sbjct: 67  STPLLVQIFFLYYVMPEFGVSMSPLATGVFAL 98


>gi|225573416|ref|ZP_03782171.1| hypothetical protein RUMHYD_01608 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039226|gb|EEG49472.1| hypothetical protein RUMHYD_01608 [Blautia hydrogenotrophica DSM
           10507]
          Length = 213

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 106/204 (51%), Gaps = 22/204 (10%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + V + ++GI++ +   R            +  LY+ T +    P +VL+ L + ++   
Sbjct: 19  VVVSTLIVGILVGVVRFR-----KIPVVSQIIDLYV-TAMRGIPPLVVLMMLYFTVN--- 69

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                        +S  FM+ ++AL+ Y  A+++E+VR GL A+PRGQMEA  +LGL   
Sbjct: 70  -------------MSSAFMTAFVALTLYHGAYVSEVVRGGLTAIPRGQMEAGKSLGLGFV 116

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    + LPQ M+ IIP L  QY+ ++K+++L   VG  DL+     ++  T + +EI L
Sbjct: 117 RIMFSIYLPQIMKQIIPTLCGQYILVVKDTTLVSVVGLQDLMWNAKELMAVTYKPMEIYL 176

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
           I   IY  +  +I +  NR+  K+
Sbjct: 177 IVGLIYFVICWVIDIIANRVENKV 200



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 11/200 (5%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             I+ G   TF L    ++   I+G LVG  R     +V+ I  +YV   R IPPLVV+ 
Sbjct: 3   QYIVDGIGITFKLVPCVVVSTLIVGILVGVVRFRKIPVVSQIIDLYVTAMRGIPPLVVLM 62

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF-SFVLGIVLSLFAT 205
            LY +V          + L          +    LT     ++    S  LG V  +F+ 
Sbjct: 63  MLYFTVNMSSAFMTAFVALTLYHGAYVSEVVRGGLTAIPRGQMEAGKSLGLGFVRIMFSI 122

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L +       + +P L     L+    TLV +     L ++   L         T  P 
Sbjct: 123 YLPQIMK----QIIPTLCGQYILVVKDTTLVSVVGLQDLMWNAKELM------AVTYKPM 172

Query: 266 FMSLYIALSCYTAAFIAEIV 285
            + L + L  +   ++ +I+
Sbjct: 173 EIYLIVGLIYFVICWVIDII 192


>gi|304413343|ref|ZP_07394816.1| permease component of ABC-type amino acid transport system
           [Candidatus Regiella insecticola LSR1]
 gi|304284186|gb|EFL92579.1| permease component of ABC-type amino acid transport system
           [Candidatus Regiella insecticola LSR1]
          Length = 218

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +  K    + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAYGGKISSNIALVFIE--LIRGTPIIVQVMFIY---FAMPIMMPIRI-------DPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 90  TAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSKRDTLRYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFMVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLVITLALSFVLR 209

Query: 387 RLNAKIAL 394
           ++  K+ +
Sbjct: 210 KVEKKLKI 217


>gi|222870369|gb|EEF07500.1| predicted protein [Populus trichocarpa]
          Length = 145

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 71/144 (49%), Positives = 100/144 (69%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F   GG  ++PEF++L  AL  Y AA+ AEIVR+GL AVPRGQ  AA ALG+   +  RL
Sbjct: 2   FGIDGGLALTPEFLALVGALGLYAAAYCAEIVRAGLQAVPRGQWNAASALGMRRGQQLRL 61

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA+R IIPP T+  L+ +KNSSLAVA+G+ D+V V  T ++QTGQAIE + I   +
Sbjct: 62  VVLPQALRVIIPPYTNLALSTIKNSSLAVAIGYPDVVMVANTAMSQTGQAIECVTIIAVV 121

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           YL+++++ +L +N  N + A   +
Sbjct: 122 YLAINLLTSLALNAFNQRSAFITR 145


>gi|70731862|ref|YP_261604.1| arginine/ornithine ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68346161|gb|AAY93767.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 229

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P   +    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGYDDYIDLNP-LAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++  +    V++PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSSFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     +L      +     + LN 
Sbjct: 65  ILLIFYGGQDLLNRVAPLLGYDDYIDLNP 93


>gi|327467233|gb|EGF12737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
 gi|328945052|gb|EGG39208.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 270

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 108/259 (41%), Gaps = 16/259 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++    Y+  L ++P       L          L    +T+   A   VF  +L +V ++
Sbjct: 8   LLTTGWYEEFLKIIPDGK-LFSLRAVFEAIPGILQNLPITLLLTAGGAVFGILLAMVFAI 66

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-----GQFNFI 257
                 +  +       P+       + G P LV + L Y   F  P+L      ++   
Sbjct: 67  VKINRVKVLY-------PIQAFFVSFLRGTPLLVQLMLTY---FGIPLLLKAINQKYGTS 116

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                 P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+++    V++P
Sbjct: 117 FNINEIPASVFAIVAFAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNKQVYMRVIIP 176

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A     P L +  + L K +SLA + G  ++ +    I     +  E  +    IY ++
Sbjct: 177 NAAVVATPSLINSLIGLTKGTSLAFSAGVVEIFAKAQAIAGADYRYFERFISVSLIYWAV 236

Query: 378 SIMIALFMNRLNAKIALKE 396
           +I+I      +   + +K+
Sbjct: 237 NILIEQLGRWIEKMMDIKQ 255


>gi|317049797|ref|YP_004117445.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951414|gb|ADU70889.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 366

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 71/340 (20%), Positives = 134/340 (39%), Gaps = 54/340 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P+        A+++G ++         I    I ++   GR  
Sbjct: 76  WVFIHARFG-QFMYGLYPHELRWRINLALVIGLLS---------IIPMFIKSMPHRGR-- 123

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +    P++V F +Y   L +  +                     T
Sbjct: 124 -----------YIACWAVAYPIIVWFLMYGGYLGLDRVETRQ-------------WGGLT 159

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 160 LTLIIASVGIAGALPLGILLAL-----GRRSKMPVVRTLSVIFIEFWRGVPLITVLFMS- 213

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 214 ---------SVMLPLFMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 264

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++  IP L +  + L K++SL + +G  DL S         
Sbjct: 265 ESLALGYWKTQILVILPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 324

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G + E  +    +Y      ++ +   L  +     K
Sbjct: 325 TWLGMSTEGYVFAALVYWIFCFSMSRYSQYLEKRFHTGRK 364


>gi|254473279|ref|ZP_05086676.1| amino acid ABC transporter, permease protein [Pseudovibrio sp.
           JE062]
 gi|211957395|gb|EEA92598.1| amino acid ABC transporter, permease protein [Pseudovibrio sp.
           JE062]
          Length = 305

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 5/216 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                K+   S +LG++LS+  T   R    +    +   Y+  F   G P L  + L Y
Sbjct: 95  FIITLKLVAVSMLLGVLLSIPMT-FMRMSKNRILGGIAYGYVYFF--RGTPLLAQVFLIY 151

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                       +          +    +A +  TAA+  EI+R  + ++ +GQ EAA A
Sbjct: 152 Y-GAGTFREPLQSVDMWWFFRDAWNCAVLAFTLNTAAYQVEILRGSIESIAKGQWEAASA 210

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL        ++LPQA+   + P  ++ + ++K S++   +   DL+       ++T  
Sbjct: 211 LGLPKWLTFWKIILPQALIVSLRPYGNEIILMIKGSAIVAIITIYDLMGETRRAFSRTYD 270

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  +     YL +   +    +R+ A++     +
Sbjct: 271 -FQAYVWAAIAYLVMVETLRRAWDRIEARLTRHLHR 305



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + GF+ T  L    M+   ++   +   R+S N+++  I   YV  FR  P L  
Sbjct: 87  YGEKFVSGFIITLKLVAVSMLLGVLLSIPMTFMRMSKNRILGGIAYGYVYFFRGTPLLAQ 146

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +F +Y    +         +  F     N
Sbjct: 147 VFLIYYGAGTFREPLQSVDMWWFFRDAWN 175


>gi|24379910|ref|NP_721865.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|24377889|gb|AAN59171.1|AE014984_6 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
          Length = 234

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 11/215 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +          ++ VF+ +L ++L +    +S     K  K +  +Y+  F     P 
Sbjct: 22  NFNQFLKGFFYTLEMSVFALLLSLILGVIFGAMS-SSKTKLLKGIARVYVEIF--QNTPL 78

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV     Y                G+ +   F +  + +  Y  A+IAE++RSG+ AVPR
Sbjct: 79  LVQFVFVYYGLAIM--------TNGAVMISAFFTAVLCVGIYHGAYIAEVIRSGIEAVPR 130

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA++ G T+++   L++LPQA+R+I+PP+T+Q +NL+KN+S    +  AD++    
Sbjct: 131 GQTEAALSQGFTYQETMSLIILPQAIRTILPPMTNQVVNLIKNTSTVAIISGADIMFTAK 190

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
               +T   I       F+Y  +   +A +  R  
Sbjct: 191 AWAYETTNYIPAFAGAAFLYFIMCFPLATWARRKE 225



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T  ++   ++ + I+G + GA   S  KL+  I RVYVE+F+N P LV   F+
Sbjct: 26  FLKGFFYTLEMSVFALLLSLILGVIFGAMSSSKTKLLKGIARVYVEIFQNTPLLVQFVFV 85

Query: 149 YKSV 152
           Y  +
Sbjct: 86  YYGL 89


>gi|323493778|ref|ZP_08098896.1| putative amino-acid ABC transporter permease PatM [Vibrio
           brasiliensis LMG 20546]
 gi|323311912|gb|EGA65058.1| putative amino-acid ABC transporter permease PatM [Vibrio
           brasiliensis LMG 20546]
          Length = 223

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      +FS VL ++L+       R F       L  L
Sbjct: 3   FDFNYMLDLMPILLKYLGTTMEMATWGLLFSLVLAVILANI-----RVFRVPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P L   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQVFPWLVGLD---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + ++  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLLFSLVLAVILANIRVFRVPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPI 158
           Y  +  V P 
Sbjct: 75  YYGLPQVFPW 84


>gi|323342443|ref|ZP_08082675.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463555|gb|EFY08749.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 220

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 113/226 (50%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L     T+  +  + + S +LG  L+     + +    K  K +  +YI   +I 
Sbjct: 12  YGHVYLKGAWGTLTISVVVVLISTLLGAFLA-----MGKMSKFKPLKTIINVYIE--VIR 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ ++L Y L  +            ST  P+   + +AL   ++A++AEI R+G+ 
Sbjct: 65  GTPLLLQLSLFYFLGSEY----------ISTSVPDVGWIMVALIINSSAYVAEIFRAGIQ 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV +GQ EAA +LG+++    + ++ PQA+++I+P L ++++ ++K +SLA      +L+
Sbjct: 115 AVDKGQFEAAKSLGISNANMMKKIIFPQAIKNILPALGNEFITMIKETSLASVFFVNNLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    + + T   +  ++I   IY  ++   +  +     K+AL +
Sbjct: 175 TSESIVSSATHLKLPSLMIVGVIYFIMTFSTSKLIAAFERKVALND 220



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  ++   ++ +T++G  +  G++S  K +  I  VY+EV R  P L+
Sbjct: 11  RYGHVYLKGAWGTLTISVVVVLISTLLGAFLAMGKMSKFKPLKTIINVYIEVIRGTPLLL 70

Query: 144 VIFFLYKSVLS 154
            +   Y     
Sbjct: 71  QLSLFYFLGSE 81


>gi|226306242|ref|YP_002766202.1| glutamate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|226185359|dbj|BAH33463.1| glutamate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
          Length = 298

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 15/237 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         +     T+   A   VF+ +LG  L +      R       + +  
Sbjct: 53  WDPFLESTSWTTYLIPGIRGTLIAAAMSIVFALILGSALGI-----GRLSEHNIIRKICG 107

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +  F    +P L+L+   YQ+  +  V          +      ++ + L+ Y  + I
Sbjct: 108 VIVELF--RAVPVLILMIFSYQVFAEYEVFK--------SKYLALAAVVVGLTLYNGSVI 157

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR+G+ ++PRGQ EAA ALG+   +    +LLPQA+ +++P L SQ +  LK+S+L 
Sbjct: 158 AEIVRAGINSLPRGQSEAAKALGMRKTQIMVTILLPQAVTAMLPALISQMVVALKDSALG 217

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +G+ +LV     +    G  +  +++   I ++L+  +     ++  ++   ++K
Sbjct: 218 YLIGYVELVRQAQQLGTFYGNFLPALIVVAAIMIALNSALTFLATKVEKRLRSGKRK 274



 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 20/148 (13%)

Query: 15  RMKFLYD---MRVHNIS-VQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           R   LYD    R  N+     ++   L V   + +                  L E+   
Sbjct: 4   RATVLYDAPGPRARNLYRFASLVVAALMVAIGYVIYRA---------------LDEKGQL 48

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
              +   P+   +S+ T ++ G   T   A   ++ A I+G+ +G GRLS + ++  IC 
Sbjct: 49  TAAK-WDPFLESTSWTTYLIPGIRGTLIAAAMSIVFALILGSALGIGRLSEHNIIRKICG 107

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           V VE+FR +P L+++ F Y+        
Sbjct: 108 VIVELFRAVPVLILMIFSYQVFAEYEVF 135


>gi|16262493|ref|NP_435286.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|14523098|gb|AAK64698.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 218

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 14/226 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                           +   +F  G V  L    L R    +  +     +I  F   G 
Sbjct: 7   WNEFLVIVAAAQWTIALSAIAFAGGSVGGLLV-ALMRVSETRALRLFATGFIRVF--QGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + L +           F           +++  IAL+ + +AF+ EI R  + AV
Sbjct: 64  PLLMQLFLVF-----------FGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA ALGL + ++ R V+LPQA R  + P     + L+K +SLA  +GF +L   
Sbjct: 113 PKGQREAATALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQ 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  I N T     +      +Y  L   ++L   R+  + +    +
Sbjct: 173 GQIINNATFSPFLVFGTVAAVYFLLCWPLSLIARRMETRFSRATAR 218



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 35/106 (33%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +    I+     T  L+       ++ G LV   R+S  + +      ++ VF+  P 
Sbjct: 6   GWNEFLVIVAAAQWTIALSAIAFAGGSVGGLLVALMRVSETRALRLFATGFIRVFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L+ +F ++  +       +  I     + L+              A
Sbjct: 66  LMQLFLVFFGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEA 111


>gi|255973159|ref|ZP_05423745.1| amino acid ABC transporter permease [Enterococcus faecalis T1]
 gi|255976202|ref|ZP_05426788.1| amino acid ABC transporter permease [Enterococcus faecalis T2]
 gi|255964177|gb|EET96653.1| amino acid ABC transporter permease [Enterococcus faecalis T1]
 gi|255969074|gb|EET99696.1| amino acid ABC transporter permease [Enterococcus faecalis T2]
          Length = 235

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 18/246 (7%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
                S L   P   +     F      +              + + + ++   L +F  
Sbjct: 1   MLANISWLEEGPFALYRWEALF------QDWRIFGQAFLYTILLSLGAILVAFALGIFFG 54

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            LS     K   A+  +Y+  F     P L+   + Y   +  P+L        +T+   
Sbjct: 55  SLSAT-KSKLLHAISRVYVEFF--QNTPLLIQFIVVY---YGFPLLSPLLSFSITTI--- 105

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                + +  Y  A+I+E+VRSG+ AVPRGQ EAA + GLT+ +  R V+LPQA R ++P
Sbjct: 106 ---AILCVGLYHGAYISEVVRSGIGAVPRGQFEAAYSQGLTYGQTMRYVILPQAWRIMLP 162

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLT+Q +NL+KN+S    +  AD++    +  +     I    +  F+Y  L   +A   
Sbjct: 163 PLTNQVVNLIKNTSTVAIISGADVMFAANSWSSVNLNYIPAFALAGFLYFILCFPLANLA 222

Query: 386 NRLNAK 391
            ++  K
Sbjct: 223 RKMEEK 228



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                  F+ T  L+   ++ A  +G   G+   + +KL+  I RVYVE F+N P L+  
Sbjct: 25  WRIFGQAFLYTILLSLGAILVAFALGIFFGSLSATKSKLLHAISRVYVEFFQNTPLLIQF 84

Query: 146 FFLYKSVLSVLP 157
             +Y     + P
Sbjct: 85  IVVYYGFPLLSP 96


>gi|118474738|ref|YP_892387.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter fetus subsp. fetus 82-40]
 gi|118413964|gb|ABK82384.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter fetus subsp. fetus 82-40]
          Length = 239

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
              +  T   +      +GIVL      L +  + K    +   YI   ++ G P L+ +
Sbjct: 39  YVDSYFTTLGLTFGGIFIGIVLGFILAFL-KFLNIKILSFIIDEYID--IVRGTPVLLQL 95

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +             F F+  +T+S  F +  IAL   ++A++AEIVRSG+ +V +GQME
Sbjct: 96  MI-------------FAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQME 142

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A+GL++  + R ++ PQA+++I+P L +++++L K +S+   +G  DL     ++  
Sbjct: 143 AARAMGLSYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDLTMQSKSLQA 202

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 E IL    IY +     +L    L  ++
Sbjct: 203 TLFSP-EPILFAGVIYYANVKFFSLLAKLLENRL 235



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 42/93 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
            P +   +   A +  +  T  L F G+    ++G ++   +    K++++I   Y+++ 
Sbjct: 27  YPVSITDAQKGAYVDSYFTTLGLTFGGIFIGIVLGFILAFLKFLNIKILSFIIDEYIDIV 86

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           R  P L+ +      +L+ L    ++ V+  G+
Sbjct: 87  RGTPVLLQLMIFAFVILATLSDNFYAAVIALGL 119


>gi|146280412|ref|YP_001170565.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145568617|gb|ABP77723.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
          Length = 219

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 14/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L        T   I +  F + +VL LF   + R    +         I 
Sbjct: 3   FFDWEFAREILPRLLDASLTTIGIALAGFAIAVVLGLFL-AIGRRSRHRWLSWPVTGLIE 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I   P L+ +   + +           F           +  I ++ + A + AE+ 
Sbjct: 62  F--IRSTPLLIQVYFLFYV-----------FPNYGLNLSAMQAGIIGIALHYACYTAEVY 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL AVPR Q EA  AL +    A R V+LPQA+R ++P L +  +++LK++ +  A+ 
Sbjct: 109 RAGLDAVPRSQWEAVTALNMKPWTAYRDVILPQALRPVMPALGNYLISILKDTPVLSAIT 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +++     I +++ + +E I +    +L LS+ +A  + RL  ++ L  
Sbjct: 169 VVEIMQRAKNIGSESFRYLEPITMVGVFFLILSLGLAWCVRRLEHRMELAR 219



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  +A +G   A ++G  +  GR S ++ ++W     +E  R+ P L+ ++FL
Sbjct: 16  LLDASLTTIGIALAGFAIAVVLGLFLAIGRRSRHRWLSWPVTGLIEFIRSTPLLIQVYFL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +    +             G+ L+ 
Sbjct: 76  FYVFPNYGLNLSAMQAGIIGIALHY 100


>gi|330505354|ref|YP_004382223.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328919640|gb|AEB60471.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01]
          Length = 248

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             ++    T+      ++ +  LG +L +      R    +    L   Y+  F    +P
Sbjct: 24  WFITGLGWTIAIALAGWIIALALGSLLGVM-----RTLPNRWLSGLATAYVEIF--RNVP 76

Query: 234 TLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + L Y L  D     L  +     +  +  ++S+ + L  +TAA + E VR+G+ A
Sbjct: 77  LLVQLFLWYFLVPDLLPEPLELWFKQDLNPATSAYLSVVVCLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA A+G    +    VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L++
Sbjct: 137 LPKGQTAAAYAMGFRLPQIYTNVLLPQAYRIIIPPLTSEFLNIFKNSSVASLIGLMELLA 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +    E   +   IY +L++ + + M  +  K+A+
Sbjct: 197 QTKQTAEFSANLFEAFTLATLIYFTLNMSLMMIMRMIEKKVAV 239



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A +G I A  +G+L+G  R   N+ ++ +   YVE+FRN+P 
Sbjct: 18  SETYLDWFITGLGWTIAIALAGWIIALALGSLLGVMRTLPNRWLSGLATAYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP P        
Sbjct: 78  LVQLFLWYFLVPDLLPEPLELWFKQD 103


>gi|222080908|ref|YP_002540271.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725587|gb|ACM28676.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 238

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 9/211 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F  G VL+L  T +S  F    G  + LL  +        TLV +     L    PVL 
Sbjct: 14  AFFHGAVLTLLITIVSLFFGIIVGLVIALLQETELRAVKAATLVYL----WLFRGTPVLF 69

Query: 253 QFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           Q  FI     G        +S  +ALS    A++AEI+RSGL AV +GQ  A +ALG+T 
Sbjct: 70  QIIFIYNVLPGFGIRLSAILSAVLALSLNEGAYMAEILRSGLHAVKKGQRTAGLALGMTR 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R V++PQA R ++P + +Q + +LK S+L   V   +L+ V     +   +  E +
Sbjct: 130 ASVMRFVVMPQAARIVLPAVGNQMIGMLKTSALVSVVAVEELLLVANQTASANFRYFEAL 189

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 YL+L+ +  +F + L   +  K  +
Sbjct: 190 SAAGIYYLALTTIFMVFQSILERSLDPKRGR 220



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 35/100 (35%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A   G V T  +    +    I+G ++   + +  + V     VY+ +FR  P L  I F
Sbjct: 14  AFFHGAVLTLLITIVSLFFGIIVGLVIALLQETELRAVKAATLVYLWLFRGTPVLFQIIF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +Y  +          +     + LN        L    +A
Sbjct: 74  IYNVLPGFGIRLSAILSAVLALSLNEGAYMAEILRSGLHA 113


>gi|213691657|ref|YP_002322243.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|317481626|ref|ZP_07940661.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium
           sp. 12_1_47BFAA]
 gi|213523118|gb|ACJ51865.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|316916916|gb|EFV38303.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium
           sp. 12_1_47BFAA]
 gi|320457746|dbj|BAJ68367.1| putative amino acid ABC transporter permease component
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 220

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SF LG++L++    L R         +   YI  F   G P LV + + +  
Sbjct: 23  VTIPLTLISFALGLILAIVV-ALVRVAKVPVASQIAWFYIWVF--RGTPLLVQLFVIF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P   S  IA S    A+ AE +R  ++AVP+GQ+EA +A  
Sbjct: 78  ---------FGLPSVGITIPALPSAVIAFSLNVGAYAAETLRGAILAVPKGQLEAGLAAN 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           + +    R ++LPQA RS  P L + ++ L+K++SLA  +   ++      I+    + +
Sbjct: 129 MPYVTIMRRIILPQAFRSAFPALFNSFIALVKDTSLAANITVVEMFMTAQRIVAIYYEPL 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + +    IYL    ++    +    K+
Sbjct: 189 VLYIEVGLIYLLFCTLLGWLQDYCEKKL 216



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+A  ++ G   T  L         I+  +V   R++   + + I   Y+ VFR  P L
Sbjct: 11  DSFAKLLIPGITVTIPLTLISFALGLILAIVVALVRVAKVPVASQIAWFYIWVFRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV               LN
Sbjct: 71  VQLFVIFFGLPSVGITIPALPSAVIAFSLN 100


>gi|186476549|ref|YP_001858019.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193008|gb|ACC70973.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 229

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 3/212 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V S    +VL L     ++    +  +AL   Y  T LI  +P LVL+ L +    
Sbjct: 18  VELSVLSLATSVVLGLVGAA-AKLSLNRPLRALATGY--TTLIRSVPDLVLMLLLFYSIQ 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F++  + L     A+  E  R   +AVPRGQ+EA  A G++
Sbjct: 75  IAVNNLTDALDLPQFDIDPFIAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGAAYGMS 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         T      
Sbjct: 135 GARVFARILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFF 194

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           IL+   IYL+++ +  L +  L  + ++  + 
Sbjct: 195 ILVAALIYLAITTVSNLVLIWLEKRYSIGVRH 226


>gi|53720530|ref|YP_109516.1| glutamate/aspartate transport system permease [Burkholderia
           pseudomallei K96243]
 gi|53725718|ref|YP_103984.1| glutamate/aspartate ABC transporter permease [Burkholderia mallei
           ATCC 23344]
 gi|67643522|ref|ZP_00442267.1| glutamate/aspartate transport system permease protein GltK
           [Burkholderia mallei GB8 horse 4]
 gi|76810556|ref|YP_334803.1| glutamate/aspartate ABC transporter permease [Burkholderia
           pseudomallei 1710b]
 gi|121601568|ref|YP_991699.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei SAVP1]
 gi|124383835|ref|YP_001027194.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei NCTC 10229]
 gi|126440693|ref|YP_001060405.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 668]
 gi|126448697|ref|YP_001082146.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei NCTC 10247]
 gi|126452941|ref|YP_001067666.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1106a]
 gi|134280384|ref|ZP_01767095.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 305]
 gi|166998511|ref|ZP_02264369.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei PRL-20]
 gi|167721207|ref|ZP_02404443.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei DM98]
 gi|167740179|ref|ZP_02412953.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 14]
 gi|167817394|ref|ZP_02449074.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 91]
 gi|167825800|ref|ZP_02457271.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 9]
 gi|167847284|ref|ZP_02472792.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei B7210]
 gi|167895872|ref|ZP_02483274.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 7894]
 gi|167904260|ref|ZP_02491465.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei NCTC 13177]
 gi|167912521|ref|ZP_02499612.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 112]
 gi|167920472|ref|ZP_02507563.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei BCC215]
 gi|217420836|ref|ZP_03452341.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 576]
 gi|226196806|ref|ZP_03792385.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei Pakistan 9]
 gi|237813796|ref|YP_002898247.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei MSHR346]
 gi|242317860|ref|ZP_04816876.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1106b]
 gi|254178792|ref|ZP_04885446.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei ATCC 10399]
 gi|254180663|ref|ZP_04887261.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1655]
 gi|254190904|ref|ZP_04897410.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254199132|ref|ZP_04905547.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei S13]
 gi|254202699|ref|ZP_04909062.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei FMH]
 gi|254208039|ref|ZP_04914389.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei JHU]
 gi|254261455|ref|ZP_04952509.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1710a]
 gi|254299252|ref|ZP_04966702.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 406e]
 gi|52210944|emb|CAH36932.1| glutamate/aspartate transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|52429141|gb|AAU49734.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           mallei ATCC 23344]
 gi|76580009|gb|ABA49484.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           pseudomallei 1710b]
 gi|121230378|gb|ABM52896.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei SAVP1]
 gi|124291855|gb|ABN01124.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei NCTC 10229]
 gi|126220186|gb|ABN83692.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 668]
 gi|126226583|gb|ABN90123.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1106a]
 gi|126241567|gb|ABO04660.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei NCTC 10247]
 gi|134248391|gb|EBA48474.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 305]
 gi|147746946|gb|EDK54023.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei FMH]
 gi|147751933|gb|EDK59000.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei JHU]
 gi|157809233|gb|EDO86403.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 406e]
 gi|157938578|gb|EDO94248.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160694706|gb|EDP84714.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei ATCC 10399]
 gi|169656962|gb|EDS88359.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei S13]
 gi|184211202|gb|EDU08245.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1655]
 gi|217396248|gb|EEC36265.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 576]
 gi|225931066|gb|EEH27074.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei Pakistan 9]
 gi|237504945|gb|ACQ97263.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei MSHR346]
 gi|238524885|gb|EEP88315.1| glutamate/aspartate transport system permease protein GltK
           [Burkholderia mallei GB8 horse 4]
 gi|242141099|gb|EES27501.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1106b]
 gi|243065196|gb|EES47382.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia mallei PRL-20]
 gi|254220144|gb|EET09528.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia pseudomallei 1710a]
          Length = 225

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGALPTLWTGAVVTFKITLLAIVIGIVWGTLL-ALMRLSGVKPLAWFAQGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G ++E+IL     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTSVEMILFAGACYFVVCSVASALVKGLQKKVTR 225



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAVVTFKITLLAIVIGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  +
Sbjct: 76  FLIVPQL 82


>gi|322388157|ref|ZP_08061761.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
 gi|321140829|gb|EFX36330.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
          Length = 266

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 5/230 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F       G+      + T   + VF    GI+L+L     +     +     PL     
Sbjct: 25  FSWRSVFDGIPRIVQQLPTTLMLTVFGAFFGIMLALV---FAIVKINRVRFIYPLQAFFV 81

Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             + G P LV + L Y       K +  Q+         P      +A +   AA+ +E 
Sbjct: 82  SFLKGTPILVQLMLTYYGIPLALKALNQQWGTSLNINAIPAATFAIVAFAFNEAAYASET 141

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + 
Sbjct: 142 IRAAILSVDPGEIEAARSLGMTRGQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSA 201

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  ++ +    +     +  E  +    +Y  ++I+I      +  K+A+
Sbjct: 202 GVVEVFAQAQILGGADYRYFERFISVALVYWVVNIVIENLGRFIERKMAI 251


>gi|260550886|ref|ZP_05825092.1| amino acid ABC transporter permease [Acinetobacter sp. RUH2624]
 gi|260406013|gb|EEW99499.1| amino acid ABC transporter permease [Acinetobacter sp. RUH2624]
          Length = 229

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 9/224 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S ++G++ +      S+  + K  + +   Y  T LI  +P L
Sbjct: 11  LSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSNIKALRYIATAY--TTLIRSVPDL 63

Query: 236 VLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V++ L +  L      + +   +    ++P F++  I L+    A+  E  R    +VPR
Sbjct: 64  VIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA+A G+T  +    VL PQ MR  +P + + +  L+K ++L   +G  D+V +  
Sbjct: 123 GQIEAAMAYGMTPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQ 182

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                T Q     ++   IYL ++ +  L +  L    +   +K
Sbjct: 183 DAGRSTMQLFFFSIVAAAIYLVITTVSNLILMWLERHYSAGVRK 226


>gi|261337914|ref|ZP_05965798.1| permease protein of ABC transporter [Bifidobacterium gallicum DSM
           20093]
 gi|270277398|gb|EFA23252.1| permease protein of ABC transporter [Bifidobacterium gallicum DSM
           20093]
          Length = 420

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 104/234 (44%), Gaps = 18/234 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G   ++  L     T+  +    V + + G++L +      R       + +  
Sbjct: 59  WKPALDGEAWSDFYLPGLWATIRASLLAVVGAVLFGLILGV-----GRLLPNVLLRGVCG 113

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +           VLI + +           F FIG  +  P + ++ I+L  Y  + I
Sbjct: 114 IVVEFCRAVP----VLIMMIF-------FWRAFAFIGWDS--PSYWAVVISLVLYNGSVI 160

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+VRSG+  +P GQ EA++ALGLT  ++   V +PQA+ +++P   +Q + +LK+++L 
Sbjct: 161 AELVRSGVGNLPNGQREASLALGLTRTQSLMQVEVPQAIFAMLPAAVTQLVVVLKDTALG 220

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + + DL+     + +     ++ +++   IY  +   ++     L  ++  +
Sbjct: 221 SIIMYTDLLQESRRLGSMYFNILQTLVVAAVIYFIVCAALSKLAEWLPTRMQER 274



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 1/104 (0%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     +++   L G   T   +   ++ A + G ++G GRL  N L+  +C + V
Sbjct: 57  ELWKPALDGEAWSDFYLPGLWATIRASLLAVVGAVLFGLILGVGRLLPNVLLRGVCGIVV 116

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLNNRGL 176
           E  R +P L+++ F +++        P +  V+   +  N   +
Sbjct: 117 EFCRAVPVLIMMIFFWRAFAFIGWDSPSYWAVVISLVLYNGSVI 160


>gi|209547509|ref|YP_002279427.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538753|gb|ACI58687.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 324

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 15/282 (5%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GR +   ++A +  + V +         I  ++  +L +      +  L           
Sbjct: 58  GRFAIAFVIAVLFVLNVVLIGFASLRTQIAIVWLELLGLFLAFFATFHLSLPFIAEKLPF 117

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 + T   +   S V+   +++    +++        A+   Y S F       L 
Sbjct: 118 MITQGLVTT-IYVSAVSIVIASAIAILG-AVAKLSTNGFAYAIASFYTSFFR-----GLP 170

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y ++   P L          V     +  +ALS    A++ EI RSG+ ++ RGQ
Sbjct: 171 LLMQVYLIYLGLPQL--------GFVIDAVPAGILALSLCYGAYMTEIFRSGIQSIDRGQ 222

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA+ ++G       R ++LPQA+  IIPP  +Q++++LK+SSL   +G  +L+ +  T+
Sbjct: 223 WEASRSIGFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTL 282

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T Q +E+++    +Y  +SI + L   R+    A  + +
Sbjct: 283 GQKTFQHMEMLISAAMLYWIMSICLELIQARIERHYARSKVR 324



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G V T +++   ++ A+ I  L    +LS N     I   Y   FR +P L+ ++ +
Sbjct: 119 ITQGLVTTIYVSAVSIVIASAIAILGAVAKLSTNGFAYAIASFYTSFFRGLPLLMQVYLI 178

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +  +  + D        + L               + 
Sbjct: 179 YLGLPQLGFVIDAVPAGILALSLCYGAYMTEIFRSGIQSI 218


>gi|257387737|ref|YP_003177510.1| polar amino acid ABC transporter inner membrane subunit
           [Halomicrobium mukohataei DSM 12286]
 gi|257170044|gb|ACV47803.1| polar amino acid ABC transporter, inner membrane subunit
           [Halomicrobium mukohataei DSM 12286]
          Length = 338

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 4/212 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + S VLG+ +++    ++R +  +    + L Y    L+ G P L  + L Y 
Sbjct: 121 FITVYLTLASMVLGLAIAVPL-SVARVYGGRIVGTVSLAYTE--LVRGTPLLAQLFLLYY 177

Query: 244 LHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                  +     +G G+          +  +  ++A+ AE +R  L +V  GQ+ AA +
Sbjct: 178 GLPLAEEIEGLGLVGEGAVPRAAVFVAIVGFTINSSAYQAEYIRGALQSVDSGQLVAARS 237

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GL+     R V+LPQ +R  IP  T++++ L+K SSLA  +   +L      I + + +
Sbjct: 238 IGLSKAAGIRHVVLPQGLRYAIPGWTNEFVYLIKYSSLAAFITVPELFRQARIIASDSFR 297

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  ++   +YL+L +  AL M+RL A +A+
Sbjct: 298 VTDTYVVVAVLYLALVLTTALAMDRLEAAVAV 329



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+  G   T +L  + M+    I   +   R+   ++V  +   Y E+ R  P L  +
Sbjct: 113 GPAMAAGAFITVYLTLASMVLGLAIAVPLSVARVYGGRIVGTVSLAYTELVRGTPLLAQL 172

Query: 146 FFLYKSVLSV 155
           F LY  +   
Sbjct: 173 FLLYYGLPLA 182


>gi|186472703|ref|YP_001860045.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia phymatum STM815]
 gi|184195035|gb|ACC72999.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia phymatum STM815]
          Length = 219

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 14/232 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F +    R L            I +  F + +VL L    L R   +   + +   
Sbjct: 1   MNHFFDLQYAARILPDLARASVYTILITLVGFSIALVLGLVFAILRRSHIKPVSRTVG-- 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               F++  + +  L+   Y L +  P+                 +  I ++ + A + +
Sbjct: 59  ----FVVEFIRSTPLLIQVYVLFYVLPIY--------GVTMSALTAGTIGIALHYACYTS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL  V RGQ EAA AL L+  +    V+LPQA+R +IP L +  + + K++ +  
Sbjct: 107 EVYRAGLNGVARGQWEAACALSLSPWRTYSGVILPQAVRPVIPALGNYLVAMFKDTPVLS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+   +L+     + ++T + +E I +    +L +SI  A  + RL  ++ L
Sbjct: 167 AITVVELMQQAKNVGSETFRYLEPITLAGLFFLVISITFAQLVRRLEFRLRL 218



 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 30/80 (37%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           V T  +   G   A ++G +    R S  K V+      VE  R+ P L+ ++ L+  + 
Sbjct: 22  VYTILITLVGFSIALVLGLVFAILRRSHIKPVSRTVGFVVEFIRSTPLLIQVYVLFYVLP 81

Query: 154 SVLPIPDHSIVLPFGMFLNN 173
                         G+ L+ 
Sbjct: 82  IYGVTMSALTAGTIGIALHY 101


>gi|291619610|ref|YP_003522352.1| YckA [Pantoea ananatis LMG 20103]
 gi|291154640|gb|ADD79224.1| YckA [Pantoea ananatis LMG 20103]
          Length = 216

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +  L F     +    I + S ++   L L           K      + +  + +I   
Sbjct: 7   HVYLPFLLQGAEMTIYITILSLLISTPLGLVFAA------AKMCPFKIISWPVSVIINIT 60

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L +I + + ++F  P +              F +  + ++   + F+AEI RSG+ +V
Sbjct: 61  RALPMIVVLFYIYFVFPDI--------GITLTSFQASVVGIAFCFSTFLAEIFRSGIESV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ+EAA ++G++  KA R V+LPQA    +PP ++  + +LK+S+LA  +   ++   
Sbjct: 113 DRGQLEAARSMGMSFFKAMRRVILPQAFHVALPPYSNTLVMMLKDSALASTIAVTEMTRQ 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  +   T     +  +   +YL+L + +  F   L  +
Sbjct: 173 GQLLAASTFDNTTVYTLVALLYLTLCMPLLAFTKHLENR 211


>gi|262394186|ref|YP_003286040.1| amino acid ABC transporter permease [Vibrio sp. Ex25]
 gi|262337780|gb|ACY51575.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
          Length = 365

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 118/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     ++        +T+       V S  +G+
Sbjct: 118 TPKRIWIWLFFVNIYPFIIAGLLYGGIFGLEVVDTHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 VLAL-----GRRSEMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFMS 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  + +A++AE+VR GL A+P+GQ EAA ALGL++ K T L++LPQ
Sbjct: 223 EGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPDWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 5/198 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ +  IG ++  GR S   ++  IC VY+EV+R +P + V+F   
Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLFMAS 214

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFAT 205
             +   +     +  L   +       S     +       +    +     + LS +  
Sbjct: 215 VMLPLFMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKK 274

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSP 264
                  +     +P +  +   +F   +LVLI   +  L   +      +++G +T S 
Sbjct: 275 TGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPDWLGFATESY 334

Query: 265 EFMSLYIALSCYTAAFIA 282
            F++L   + C+  +  +
Sbjct: 335 VFVALVFWVFCFGMSRYS 352


>gi|218678907|ref|ZP_03526804.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894]
          Length = 276

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 103/257 (40%), Gaps = 7/257 (2%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +  + L         +  +++V  +      R        +     + V S V G +LSL
Sbjct: 26  LAGYILVAIWALFAALLAYTVVNGWDPEKFTRYGPRYLHGLGVTLSLVVISVVCGALLSL 85

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGST 261
               ++R    +    L   YI  F   G P L  + L Y  L   +P L          
Sbjct: 86  PL-AMARLSSSRVLNWLAYGYIYFF--RGTPLLAQLFLVYYGLGIFRPQLEAVGIWW--F 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +     A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA+ 
Sbjct: 141 FRDAWYCGLFAMTINTAAYQAEILRGAIQSVPHGQREAAAALGIHKFIAFRKIILPQALI 200

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             + P  ++ + L+K S++   +   DL+       ++T    +  L     YLS+   +
Sbjct: 201 VALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFDY-QTYLWAAIFYLSIVEAL 259

Query: 382 ALFMNRLNAKIALKEKK 398
                 +  ++    K+
Sbjct: 260 RHLWAWIERRLTRHLKR 276



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 37/96 (38%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L    ++   ++   +   RLS+++++ W+   Y+  FR  P L 
Sbjct: 57  RYGPRYLHGLGVTLSLVVISVVCGALLSLPLAMARLSSSRVLNWLAYGYIYFFRGTPLLA 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            +F +Y  +    P  +   +  F       GL   
Sbjct: 117 QLFLVYYGLGIFRPQLEAVGIWWFFRDAWYCGLFAM 152


>gi|319744752|gb|EFV97094.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 231

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 10/179 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K GK +  +Y+  F     P LV +   Y         G      G  +   F +  
Sbjct: 55  SKSKVGKLISRIYVEVF--QNTPLLVQMVFVYY--------GLAIISNGHIMISAFFTAV 104

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+PP+T+Q
Sbjct: 105 LCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +NL+KN+S    +  AD++ V       T   I         Y  +   +A +  +  
Sbjct: 165 VVNLIKNTSTVAIISGADIMFVAKAWAYDTTNYIPAFTGAAIFYFVICFPLASWARKQE 223



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++      GF+ T  ++F  ++ A I+G L G    S +K+   I R+YVEVF+N P LV
Sbjct: 19  NHFDLFFKGFLYTLGISFGALLLALILGILSGGLSTSKSKVGKLISRIYVEVFQNTPLLV 78

Query: 144 VIFFLYKSV 152
            + F+Y  +
Sbjct: 79  QMVFVYYGL 87


>gi|168177791|ref|ZP_02612455.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226947681|ref|YP_002802772.1| amino acid ABC transporter permease [Clostridium botulinum A2 str.
           Kyoto]
 gi|182671578|gb|EDT83552.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226841874|gb|ACO84540.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
          Length = 211

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 102/224 (45%), Gaps = 19/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    L    ++        +FS  LGI+++     + ++   K  K +  L   T++ 
Sbjct: 6   DITIFILKGSIISFKLFIVTIIFSIPLGILIA-----MGKNSKIKPLKII--LSAYTWIF 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ +   Y           F             + Y+       A++AE  R+G+
Sbjct: 59  RGTPLMLQLFFAY-----------FGLPAIGIRLEPLTAAYLTFIINYGAYLAETFRAGI 107

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+S+L  A+G  D+
Sbjct: 108 ESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGDI 167

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     ++ +    I    I   IYL ++  + L    L  K A
Sbjct: 168 LRAAKEVVTRDF-TITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + +F L    +I +  +G L+  G+ S  K +  I   Y  +FR  P ++ +FF 
Sbjct: 11  ILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIKPLKIILSAYTWIFRGTPLMLQLFFA 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + ++    +          +N 
Sbjct: 71  YFGLPAIGIRLEPLTAAYLTFIINY 95


>gi|220924347|ref|YP_002499649.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948954|gb|ACL59346.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 240

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 12/227 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS    T+ T    ++ +F +G V+ +      R    +  +A    Y+  F    +P
Sbjct: 24  MLLSGLVWTIVTALCAWIIAFAVGSVIGVM-----RTLPNRAAQAFGNGYVEVF--RNIP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + L +   F  P L   ++       P   F +  + L  +TA+ +AE VR+G+ +
Sbjct: 77  LLVQMFLWF---FVLPELLPQDWGTWLKQLPDAPFYTAVVCLGFFTASRVAEQVRAGIQS 133

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  A  ALGLT  +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +
Sbjct: 134 LPRGQRMAGTALGLTTGQTYRYVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTA 193

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   + Q  E       +Y+ +++++      L  K+A+   +
Sbjct: 194 RARSMQEFSFQVFEAFTAATILYIIINLVVVTAAGFLERKVAIPGAR 240



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 39/82 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA  +L G V T   A    I A  +G+++G  R   N+        YVEVFRNIP 
Sbjct: 18  TGTYADMLLSGLVWTIVTALCAWIIAFAVGSVIGVMRTLPNRAAQAFGNGYVEVFRNIPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           LV +F  +  +  +LP    + 
Sbjct: 78  LVQMFLWFFVLPELLPQDWGTW 99


>gi|153940673|ref|YP_001389816.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|152936569|gb|ABS42067.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|295317903|gb|ADF98280.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 211

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 19/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    L    ++        +FS  LGI+++     + ++   K  K +  L   T++ 
Sbjct: 6   DITIFILKGSIISFKLFIVTIIFSIPLGILIA-----MGKNSKIKPLKII--LSAYTWIF 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ +   Y   F  PV+       G  + P   + Y+       A++AE  R+G+
Sbjct: 59  RGTPLMLQLFFAY---FGLPVI-------GIRLEP-LTAAYLTFIINYGAYLAETFRAGI 107

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+S+L  A+G  D+
Sbjct: 108 ESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGDM 167

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     ++ +    I    I   IYL ++  + +    L  K A
Sbjct: 168 LRAAKEVVTRDF-TITPFFIAAAIYLLITAFLVIIFRTLEKKYA 210



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + +F L    +I +  +G L+  G+ S  K +  I   Y  +FR  P ++ +FF 
Sbjct: 11  ILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIKPLKIILSAYTWIFRGTPLMLQLFFA 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +          +N 
Sbjct: 71  YFGLPVIGIRLEPLTAAYLTFIINY 95


>gi|153012128|ref|YP_001373338.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151564016|gb|ABS17509.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 220

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 100/220 (45%), Gaps = 18/220 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+       V S +LG+V +L      R    +   A+    ++  +I G+P L
Sbjct: 16  LEGVKYTLLVTLGSLVLSTLLGLVWALM-----RVSGIRWVSAIAAAIVN--VIRGIPIL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + ++F  P                  +  I L    +A+ AE  R+G+ A+  G
Sbjct: 69  VQL---FYIYFVLPEF--------GIALSALQAGIIGLGIAYSAYQAENFRAGIEAIDHG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ++G+      R V+LPQA+R I+PP  +  + LLK+SS A A+  A+L   G  
Sbjct: 118 QTEAAQSIGMGWFMTMRRVILPQAVRVILPPYGNIMVMLLKDSSQASAITVAELTLQGQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + + T + + +  +    YL LS+ + + + RL      +
Sbjct: 178 LASSTFKNMSVYTLVAMFYLCLSLPLMMAVGRLEKLFGKR 217



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 37/100 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +T++G +    R+S  + V+ I    V V R IP LV +F++
Sbjct: 15  LLEGVKYTLLVTLGSLVLSTLLGLVWALMRVSGIRWVSAIAAAIVNVIRGIPILVQLFYI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +               G+ +               A 
Sbjct: 75  YFVLPEFGIALSALQAGIIGLGIAYSAYQAENFRAGIEAI 114


>gi|83718860|ref|YP_441774.1| glutamate/aspartate ABC transporter permease [Burkholderia
           thailandensis E264]
 gi|167580592|ref|ZP_02373466.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167618699|ref|ZP_02387330.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
 gi|257137942|ref|ZP_05586204.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83652685|gb|ABC36748.1| glutamate/aspartate ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 225

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGSLPTLWTGAIVTFKITLLAIVVGIVWGTLL-ALMRLSGVKPLAWFAQGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G ++E+IL     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTSVEMILFAGACYFVVCSVASALVKGLQKKVTR 225



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAIVTFKITLLAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  +
Sbjct: 76  FLIVPQL 82


>gi|153852847|ref|ZP_01994284.1| hypothetical protein DORLON_00266 [Dorea longicatena DSM 13814]
 gi|149754489|gb|EDM64420.1| hypothetical protein DORLON_00266 [Dorea longicatena DSM 13814]
          Length = 247

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 11/239 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F + +    +      +    ++ V S ++ ++L      L +       K L  L
Sbjct: 1   MSNLFDIKMVFTQIPDLLTYLPVTLELAVVSMIVSLIL-GLILALIKMKKIPVLKQLANL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-----PEFMSLYIALSCYT 277
           YIS  +I G P LV +   Y  +F  P++ +   +   T          +  +IAL+   
Sbjct: 60  YIS--VIRGTPVLVQL---YVTYFGIPMILKAINLKYETNYNANGVAPIIYAFIALAVNE 114

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A+ AE++R+ L +VP+GQ+EAA ALG+T+ +A R V+LP+A+   +P L + ++ L+K 
Sbjct: 115 SAYNAEVIRASLESVPKGQIEAANALGMTYFQALRRVILPEAIVVALPSLGNSFIGLIKG 174

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SLA      ++ + G  I  +T +  E+ +    IY  ++I++   +  +  KI + E
Sbjct: 175 TSLAFVCAVVEMTAAGKIIAGRTYRYFEVYVSLAIIYWIITIIVEQGIKLIEKKIRIPE 233


>gi|56962686|ref|YP_174412.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908924|dbj|BAD63451.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 226

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 95/212 (44%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
              T    F  +    I+ ++  T  +            L+          P  + +A  
Sbjct: 1   MNKTWDWEFAIAIFPEILSAITVTIAATIIAYCISLTAGLVLTLLRRASFKPLALTVAGM 60

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
            +     P L Q  F+  +T    F +  I L  + A +++EI RSG+ AVP+ Q EA+ 
Sbjct: 61  IEFIRATPPLVQLFFVYYTTPLTGFQTGAIVLGLHYATYVSEIYRSGIEAVPKSQWEASQ 120

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           AL  T  +  R ++LPQA+  +IP L +  + L K + L  A+   ++++V  +I     
Sbjct: 121 ALNFTRAQTWRRIILPQAIPPVIPMLGNYLIVLFKETPLLSAIFVVEMMAVAQSIGTSDW 180

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +E I I  F++L LS   A+F+  L  K+ 
Sbjct: 181 RYVEPITIVGFLFLVLSYPSAVFIRYLERKVG 212


>gi|254449531|ref|ZP_05062968.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Octadecabacter antarcticus 238]
 gi|198263937|gb|EDY88207.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Octadecabacter antarcticus 238]
          Length = 223

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 89/227 (39%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      +           +I +   ++ ++ +  A  L R       + L   YI  F 
Sbjct: 5   LEEWQGYIGLILQGAVVTIEITILGCIVALIAAFIAG-LGRISRFWPLRWLATAYIEFF- 62

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   Y   F  P+L                +  +AL     A+ AE+VR  
Sbjct: 63  -RGTSIFVQLFWAY---FVLPLL--------GVPLSPLQAGVLALGLNVGAYGAEVVRGA 110

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++PR Q EA  AL LT  +  R V+LPQA   ++P   +  + LLK +++   +  +D
Sbjct: 111 IKSIPREQYEACTALNLTRFQEMRHVILPQAFVRMLPTFGNNAIELLKGTAVVSLISLSD 170

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +      +  QTG      L  + +Y   S  I+  + RL  +++  
Sbjct: 171 MTFQAQIVRAQTGSTAIPFLTILLLYFLFSSTISTAIKRLERRLSRG 217



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 32/74 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G V T  +   G I A I   + G GR+S    + W+   Y+E FR     V 
Sbjct: 11  YIGLILQGAVVTIEITILGCIVALIAAFIAGLGRISRFWPLRWLATAYIEFFRGTSIFVQ 70

Query: 145 IFFLYKSVLSVLPI 158
           +F+ Y  +  +   
Sbjct: 71  LFWAYFVLPLLGVP 84


>gi|163839275|ref|YP_001623680.1| cystine transport system, permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162952751|gb|ABY22266.1| cystine transport system, permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 219

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 96/225 (42%), Gaps = 9/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N   +      +   A        L    ++           +  + L L  I  F I 
Sbjct: 1   MNWDLIWSSLGPILLGAVTATIPLALAS-FAIGLVLALAVALLRISRNLVLAGIGRFYIS 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +    L+   + + +  P +              + S  IALS     + AE++R+ ++
Sbjct: 60  VIRGTPLLVQLFVIFYGLPSI--------GVKLDPWPSAIIALSLNVGGYAAEVIRAAIL 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ EA   +G++  ++   ++LPQA R  +PPL++ +++L+K++SLA  +   +L 
Sbjct: 112 SVPKGQWEAGHMIGMSRGQSLFRIILPQAARVSLPPLSNTFISLIKDTSLASLILVTELF 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                I   +   + + L    +Y  + ++++   ++L  ++   
Sbjct: 172 KESQKIAAVSRDFMVLYLEAALVYWVICLVLSTIQSQLAKRLDRY 216


>gi|134093509|ref|YP_001098584.1| glutamate/aspartate ABC transporter permease [Herminiimonas
           arsenicoxydans]
 gi|133737412|emb|CAL60455.1| Glutamate/aspartate transport system permease protein gltJ
           [Herminiimonas arsenicoxydans]
          Length = 243

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 7/224 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                LS    T+      ++F+FVLG ++ +     +R   ++    L   Y+  F   
Sbjct: 17  WGYMLLSGLGWTLAVAFFAWIFAFVLGSLIGI-----ARTTEKRWLVGLGGAYVELF--R 69

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P LV   + Y +        +   I       +F++  I L  +T++ IAE VRSG+ 
Sbjct: 70  NIPLLVQFFVWYFVIPGLVPAVKTWVITLDPTIHQFVTAIICLGFFTSSRIAEQVRSGIQ 129

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++PRGQ  A  ALGLT  +  R VLLP A R IIPPLTS+ +NL+KN+++A ++G  +L 
Sbjct: 130 SLPRGQRNAGYALGLTGMQTYRFVLLPMAYRIIIPPLTSELMNLIKNTAVAYSIGLVELF 189

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                +   T +  E       +Y+ ++++    M  +  + A+
Sbjct: 190 FRTREMGEMTFRYFEAFGAATLMYVVIAMLANRVMALVERRTAV 233



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 43/94 (45%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
             D ++   +L G   T  +AF   I A ++G+L+G  R +  + +  +   YVE+FRNI
Sbjct: 12  DGDGTWGYMLLSGLGWTLAVAFFAWIFAFVLGSLIGIARTTEKRWLVGLGGAYVELFRNI 71

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           P LV  F  Y  +  ++P     ++         
Sbjct: 72  PLLVQFFVWYFVIPGLVPAVKTWVITLDPTIHQF 105


>gi|320334506|ref|YP_004171217.1| polar amino acid ABC transporter inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
 gi|319755795|gb|ADV67552.1| polar amino acid ABC transporter, inner membrane subunit
           [Deinococcus maricopensis DSM 21211]
          Length = 404

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 2/198 (1%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           + G+ LSL    L        G    +  +S   +    + V I L   L F   +   F
Sbjct: 191 IGGLALSLILAVLGLLLSLPFGLFFGIGRVSALPLLRAVSTVYIELFRGLPFITVIFWFF 250

Query: 255 NFIGGST-VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            F+        +F ++ +AL+ +T A++AEIVR+G+ A+PRGQ EAA ALGL+       
Sbjct: 251 IFVPYVLGEGTQFWAVILALALFTGAYVAEIVRAGIRALPRGQDEAARALGLSGTHTMLS 310

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMF 372
           V+LPQA+R++IPPL  Q+++L K++SL   +G  +L        N+      EI L    
Sbjct: 311 VILPQALRNMIPPLVGQFISLFKDTSLVSIIGLIELAGAARITGNRVVTATFEIYLTVAV 370

Query: 373 IYLSLSIMIALFMNRLNA 390
           +Y   +  ++    RL A
Sbjct: 371 LYFIFAYALSSAARRLEA 388


>gi|261251729|ref|ZP_05944303.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260938602|gb|EEX94590.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 303

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 115/270 (42%), Gaps = 17/270 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN-------RGLSFPTLTMDTNAKIFV 191
           I  L+ + +      +V    +       G+             +     T+  +    +
Sbjct: 27  IVILLAVAYWLYDRSAVGVNYNWRWQEALGLIFTPRSDGSLPYFIQGLISTLRISIWGML 86

Query: 192 FSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGL--PTLVLIALKYQ 243
            +  LG VL L         RL  +   +  + +P L       F +    + L+ L   
Sbjct: 87  LALTLGTVLGLARQSTVAVLRLPANAFVQLIRNIPPLVFVFIFYFFISSQLIPLLGLNDL 146

Query: 244 L--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           L  H     + Q    G + +    +S  + +   ++A++AE+VRSGL ++PRGQ EAA 
Sbjct: 147 LRNHHGNLNVIQSVLFGPANLWENILSGILCVGLLSSAYVAEVVRSGLTSIPRGQWEAAD 206

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL+     R V+ PQ + +I P L  Q ++L+K++S+   +   ++  VG  + N +G
Sbjct: 207 SLGLSAWVKYRYVIAPQVLAAITPALAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSG 266

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              EI LI    YL L + ++    R+  +
Sbjct: 267 LIFEIWLIVGLAYLVLCLTLSFIFKRIEKR 296



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 12/112 (10%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           ++L ++L  +  W  +       +S + +   +  + A      G++            +
Sbjct: 24  VVLIVILLAVAYWLYD-------RSAVGVNYNWRWQEA-----LGLIFTPRSDGSLPYFI 71

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            G ++T  ++  GM+ A  +GT++G  R S   ++      +V++ RNIPPL
Sbjct: 72  QGLISTLRISIWGMLLALTLGTVLGLARQSTVAVLRLPANAFVQLIRNIPPL 123


>gi|238896098|ref|YP_002920834.1| glutamine ABC transport system ATP-binding component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548416|dbj|BAH64767.1| glutamine ABC transport system ATP-binding component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 506

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +G F +   +        T   I   S+ +G+V+       ++    +  K    L
Sbjct: 1   MAFDWGYFFSLFSIGAFWQACVTVIVISTLSWGIGLVVGFLL-ACAKLSAPRWVKIPVEL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F    +P +VL+   Y L    PV      +        F++  ++++   AA++A
Sbjct: 60  YIWFF--RSVPLMVLLVFVYNLPQLFPVTQPLLGV-------PFIAGLVSMTVTEAAYMA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL++V +GQ EA  AL  +     RL+++PQA R   P L ++Y+ ++K SS+  
Sbjct: 111 EIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISQPTLINEYITIIKLSSILS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V   +L+  G  +  Q    +E +L     Y+ +  +       L  ++ ++ K+
Sbjct: 171 VVSLPELLLTGQRLYAQNFLVMETLLAVAVYYVMVVTVFTWLFRALENRLDIQRKR 226



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A     V    ++        ++G L+   +LSA + V     +Y+  FR++P +V++ F
Sbjct: 16  AFWQACVTVIVISTLSWGIGLVVGFLLACAKLSAPRWVKIPVELYIWFFRSVPLMVLLVF 75

Query: 148 LYK 150
           +Y 
Sbjct: 76  VYN 78


>gi|110633917|ref|YP_674125.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110284901|gb|ABG62960.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chelativorans sp. BNC1]
          Length = 265

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 7/259 (2%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R     +    L    + +     + ++  +   L +R        +    ++ V S + 
Sbjct: 9   RWTLARITGLVLLSGWVLLGLGVLYFLLNSWNPELISRYTPNYVSGLWVTIQLVVISILA 68

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFN 255
           G VLS+    + R    +   +L   Y+  F   G P L    L Y  L   +P L    
Sbjct: 69  GAVLSV-PIAVGRRAESRVISSLAYAYVYFF--RGTPLLAQTFLIYYGLGSFRPQLEAVG 125

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               +     +     A +  TAA+ AEI+R  + +V RGQ EAA AL  +  +  R ++
Sbjct: 126 L--WTFFRDAWFCAIFAFTLNTAAYQAEILRGAVESVGRGQWEAAAALAFSRWQTLRKII 183

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+   + P  ++ + ++K S++   +   DL+       ++T    +  +    IYL
Sbjct: 184 LPQALLVALRPYGNEIILMIKGSAIVAIITVYDLMGETRRAFSRTFD-FQTYIWAALIYL 242

Query: 376 SLSIMIALFMNRLNAKIAL 394
            L  ++ +   R+  ++  
Sbjct: 243 VLVELLRIATERIERRLTR 261



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y    + G   T  L    ++   ++   +  GR + +++++ +   YV  FR  P L
Sbjct: 45  SRYTPNYVSGLWVTIQLVVISILAGAVLSVPIAVGRRAESRVISSLAYAYVYFFRGTPLL 104

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
              F +Y  + S  P  +   +  F      
Sbjct: 105 AQTFLIYYGLGSFRPQLEAVGLWTFFRDAWF 135


>gi|319957436|ref|YP_004168699.1| amino acid ABC transporter membrane protein 2, paat family
           [Nitratifractor salsuginis DSM 16511]
 gi|319419840|gb|ADV46950.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Nitratifractor salsuginis DSM 16511]
          Length = 362

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/278 (25%), Positives = 116/278 (41%), Gaps = 18/278 (6%)

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           +L   K V       V   + +  L     L   +  +               +      
Sbjct: 95  QLWRPKTVLASAVALVAFAKFVKGLHKFKLLLIVLFPIYAYILLHGGYFGLPVVETSKWG 154

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
              LT+   +   V SF +GI+L+L      R       K+L + YI       L T VL
Sbjct: 155 GLLLTLVIASVGIVLSFPIGILLAL-----GRQSKLPIIKSLSVFYIEFVRGVPLIT-VL 208

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
                 L    P    FN         +     I ++ + AA++AE +RSG  A+P+GQ 
Sbjct: 209 FMASVVLPLFFPEGVNFN---------KLARALIGITLFEAAYVAENIRSGFQAIPKGQY 259

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALGL + +   LV+LPQA++  IP L   +++L K++SL + +G  DL+++     
Sbjct: 260 EAADALGLGYWQKMALVILPQAIKVTIPNLVGTFISLFKDTSLVMIIGLFDLLAMVNVTA 319

Query: 358 NQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           N     G   E  +   F++   +  ++++  RL  K+
Sbjct: 320 NDRDWLGMDTEGYVFVAFVFWIFTFSMSMYSKRLEKKL 357


>gi|257092716|ref|YP_003166357.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045240|gb|ACV34428.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 245

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 8/222 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                  +T+  +   +  + VLG V+ +      R    K        Y+  F    +P
Sbjct: 24  WMFYGFKVTIALSLSAWFIALVLGAVVGIL-----RTVPNKWLSGFATAYVEVF--RNIP 76

Query: 234 TLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            LV + L Y  +    P      F   + +  +F+S  + L+ +T+A +AE VRSG+ ++
Sbjct: 77  LLVQLFLWYFVMPELLPENLGNAFKQSNPIVQQFLSSMVCLALFTSARVAEQVRSGINSL 136

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ  A +A+G T  +  R VLLP A+R I+PPLTS++LN+ KNS++   +G  +L + 
Sbjct: 137 PPGQKNAGLAMGFTLSQTYRYVLLPMAVRLIVPPLTSEFLNIFKNSAVCSTIGLLELAAQ 196

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +++ T Q  E  +     YL +++++   M  +   + +
Sbjct: 197 GRQLVDYTAQPYESFIAVTLAYLLINVVVMFGMRWVEEHVRV 238



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/79 (37%), Positives = 41/79 (51%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           T D +Y   +  GF  T  L+ S    A ++G +VG  R   NK ++     YVEVFRNI
Sbjct: 16  TGDGTYLGWMFYGFKVTIALSLSAWFIALVLGAVVGILRTVPNKWLSGFATAYVEVFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLPI 158
           P LV +F  Y  +  +LP 
Sbjct: 76  PLLVQLFLWYFVMPELLPE 94


>gi|256370356|ref|YP_003107867.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|256000519|gb|ACU48918.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
          Length = 240

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 14/226 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +     +           I + +   G ++S+    L    H +  + +   Y+
Sbjct: 1   MNFDFSVIFDNWTLFARGTWLTIVIAIVAIATGFLISI-PIALMALSHRRPLRWISSAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       +VL    Y L F                 PE +   IAL+ + +++ AEI
Sbjct: 60  EWFRNI-PFIVVLYLFFYGLPF------------MGVRLPESIVGTIALAFFASSYFAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S+   +
Sbjct: 107 IRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             A+L   G  +  +T    EI L    IY  ++ + A  M+R   
Sbjct: 167 TVAELTYQGLVMQGETFAPFEIFLTTAAIYWMITAIFAYLMHRTEK 212



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T    G   T  +A   +    +I   +    LS  + + WI   YVE FRNIP +VV+
Sbjct: 12  WTLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPLRWISSAYVEWFRNIPFIVVL 71

Query: 146 FFLYKSVL 153
           +  +  + 
Sbjct: 72  YLFFYGLP 79


>gi|184154545|ref|YP_001842885.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|183225889|dbj|BAG26405.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
          Length = 418

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + + G++L +      + F         +  +  ++  G+P +V   L + +
Sbjct: 227 LTVVGVALALLFGVILGVMGISDRKIFSS-------ISSVIIYIFRGMPMIV---LAFFI 276

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +   P +            P F +  + L     A++  IV+ G  AV RGQ EAA +LG
Sbjct: 277 YIGMPSVIG-------HKIPLFTAGILTLMLDEGAYVGAIVKGGFQAVDRGQWEAARSLG 329

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L + K    V++PQ ++ ++P L +Q +  LK++S+  A+G  +L   G  II +  +  
Sbjct: 330 LPYYKTLVKVIMPQGIKIMVPSLVNQLIITLKDTSILSAIGVMELTQTGTVIIARNMEGF 389

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +I LI   IY+ +  ++    N +  K+A
Sbjct: 390 KIWLIIGVIYIIIITLLTWLSNYVQRKMA 418



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 39/75 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   A+L G   T  L   G+  A + G ++G   +S  K+ + I  V + +FR +P +V
Sbjct: 212 SNKDALLSGLGETLLLTVVGVALALLFGVILGVMGISDRKIFSSISSVIIYIFRGMPMIV 271

Query: 144 VIFFLYKSVLSVLPI 158
           + FF+Y  + SV+  
Sbjct: 272 LAFFIYIGMPSVIGH 286


>gi|90412872|ref|ZP_01220872.1| putative ABC-type arginine transport system, permease component
           [Photobacterium profundum 3TCK]
 gi|90326231|gb|EAS42658.1| putative ABC-type arginine transport system, permease component
           [Photobacterium profundum 3TCK]
          Length = 246

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 96/241 (39%), Gaps = 23/241 (9%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                      ++ + S +  ++L +    L++    +  +A+  +Y  T +I G+P LV
Sbjct: 9   WALAEGAWVTVQVALLSLLFAVILGMLG-ALAKLSPYRWARAIATIY--TTVIRGIPDLV 65

Query: 237 LIALKYQLHFDK--------------------PVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           L+ L +                          P      ++        F++  + +   
Sbjct: 66  LMMLIFFGGQMLLNDSLYRINEWFNEYFTSSDPTHEWTAYLPDYIEISPFVAGVLTIGFI 125

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AE  R  +++V +G++EA  A G++  K+   +LLPQ +R  +P   + +L LLK
Sbjct: 126 FGAYMAETFRGAILSVDKGELEAGKAYGMSSFKSFHRILLPQMIRHALPGFGNNWLVLLK 185

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++L   +G  D+V  G      T       +    I+L  + +    +     + ++  
Sbjct: 186 TTALVSIIGLDDMVRKGSLAAGATQMPFTFYMTIAVIFLLFTTLSTSALKWAERRFSIHT 245

Query: 397 K 397
           +
Sbjct: 246 R 246



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A+  G   T  +A   ++ A I+G L    +LS  +    I  +Y  V R IP LV+
Sbjct: 7   YEWALAEGAWVTVQVALLSLLFAVILGMLGALAKLSPYRWARAIATIYTTVIRGIPDLVL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL--------NNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++     +L    + I   F  +             L          A +    F+ 
Sbjct: 67  MMLIFFGGQMLLNDSLYRINEWFNEYFTSSDPTHEWTAYLPDYIEISPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|27383229|ref|NP_774758.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27356403|dbj|BAC53383.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 220

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 15/235 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                FG+  + R L    L +     + +   VLG+V  LF          K  + + L
Sbjct: 1   MYHWDFGILWSYRWLFLNGLGVTVGFTVVIV--VLGLVFGLFG-AFGSLSRLKAVRLVAL 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +I  F     P LV +      ++  P+L                +  +ALS Y  +F 
Sbjct: 58  TFIEAF--RCTPILVQLI---WFYYALPILAG-------VEMTPITASALALSLYGGSFY 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R G++++ +GQ EA  ALG+T  +A R ++LPQA++ +IP L +Q +   KN+SL 
Sbjct: 106 SEIIRGGIVSIDKGQSEAGAALGMTPGQAMRRIVLPQAIKRMIPALMNQSIIQFKNTSLV 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   DLV       + + + +E        Y ++ I + + + R   ++A+ E
Sbjct: 166 SVLAVPDLVYQSQVAAHDSYRPLETYTAVAVAYAAILIPLTIIVRRGEKRLAVGE 220



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SY    L G   T       ++   + G     G LS  K V  +   ++E FR  P L
Sbjct: 10  WSYRWLFLNGLGVTVGFTVVIVVLGLVFGLFGAFGSLSRLKAVRLVALTFIEAFRCTPIL 69

Query: 143 VVIFFLYKSVL 153
           V + + Y ++ 
Sbjct: 70  VQLIWFYYALP 80


>gi|94986086|ref|YP_605450.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM
           11300]
 gi|94556367|gb|ABF46281.1| amino acid ABC transporter membrane protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 223

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 91/169 (53%), Gaps = 8/169 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL +IS   +  +    L+   + +++  P         G TVSP  +    AL+  
Sbjct: 52  RLAPLRWISGVYVSFMRGTPLLVQIFMIYYGLPSF-------GITVSP-LVGGVAALTLN 103

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+++E +R+ +++VPRGQ EAA +LGLT R+  +L++LPQA R  +P L +  + L+K
Sbjct: 104 SAAYLSETIRAAILSVPRGQWEAAYSLGLTPRQTLQLIVLPQAARVALPSLGNTLIGLVK 163

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           ++SL   +   +L+     +I +T +     L    IY ++S ++ L  
Sbjct: 164 DTSLVSVITVVELLRSAQLVIARTFEPFGPYLAAALIYWAISSLLELVQ 212


>gi|291618213|ref|YP_003520955.1| HisM [Pantoea ananatis LMG 20103]
 gi|291153243|gb|ADD77827.1| HisM [Pantoea ananatis LMG 20103]
          Length = 253

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 98/243 (40%), Gaps = 2/243 (0%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +   +    +    +   +    + L +      T   I ++  ++ +VL      L  
Sbjct: 1   MAQSPLHGRREEGGAMIEIIHEYWKSLLWTDGYRFTGVAITLWLLIVSVVLGGCMAVLLA 60

Query: 210 HFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                  + + L +++ T++  G P  V + + Y   +   ++     +  +        
Sbjct: 61  IARVSPNRFISLPVWLFTYVFRGTPLYVQLLVFYSGMYTLEIVKGTELL-NAFFRSGLNC 119

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +A +  T A+  EI    + AVP G++EAA A G +  K  R ++LP A+R+ +P  +
Sbjct: 120 TLLAFTLNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPVYS 179

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ + +L +++LA      DL+ +   I   T Q      I   +YL +S ++       
Sbjct: 180 NEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLFRLA 239

Query: 389 NAK 391
             +
Sbjct: 240 ERR 242



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL    ++    +  L+   R+S N+ ++    ++  VFR  P  V +   Y
Sbjct: 35  FTGVAITLWLLIVSVVLGGCMAVLLAIARVSPNRFISLPVWLFTYVFRGTPLYVQLLVFY 94

Query: 150 KSVLSVLP 157
             + ++  
Sbjct: 95  SGMYTLEI 102


>gi|226366162|ref|YP_002783945.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226244652|dbj|BAH55000.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 299

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 15/236 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         +     T+   A   VF+ +LG +L +   RLS H   +  + +  
Sbjct: 53  WEPFTESTSWTTYLIPGIRGTLVAAAVSIVFALILGAILGI--GRLSDH---RPVRWVAG 107

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             +  F    +P L+L+   YQL  +  V          +      ++ + L+ Y  + I
Sbjct: 108 GIVELF--RAIPVLILMIFSYQLFAEYEVFK--------SKYLALAAVIVGLTLYNGSVI 157

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR+G+ ++P+GQ EAA+ALG+   +  R +LLPQA+ +++P + SQ +  LK+S+L 
Sbjct: 158 AEIVRAGINSLPKGQSEAAMALGMRKSQVMRTILLPQAVTAMLPAIISQMVVALKDSALG 217

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G+ ++V  G  +    G  +  +++   I + L+  + +   R+  ++    K
Sbjct: 218 YLIGYVEVVRSGQQLGAFYGNYLPALIVVAIIMIILNYTLTVVATRVEKRLRAARK 273



 Score = 69.6 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 81/226 (35%), Gaps = 7/226 (3%)

Query: 59  LGIGFLSERAGFEIDQ----GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           LGIG+L   A  +  Q       P+T  +S+ T ++ G   T   A   ++ A I+G ++
Sbjct: 32  LGIGYLVYAALDDKGQLTAAKWEPFTESTSWTTYLIPGIRGTLVAAAVSIVFALILGAIL 91

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS ++ V W+    VE+FR IP L+++ F Y+             +    + +   
Sbjct: 92  GIGRLSDHRPVRWVAGGIVELFRAIPVLILMIFSYQLFAEYEVF-KSKYLALAAVIVGLT 150

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +   +     A I                R S+              +   +   +  
Sbjct: 151 LYNGSVIAEIVRAGINSLPKGQSEAAMALGMRKSQVMRTILLPQAVTAMLPAIISQMVVA 210

Query: 235 LVLIALKYQLHFDKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   AL Y + + + V    Q     G+ +    +   I +     
Sbjct: 211 LKDSALGYLIGYVEVVRSGQQLGAFYGNYLPALIVVAIIMIILNYT 256


>gi|153835217|ref|ZP_01987884.1| general L-amino acid transport system permease protein AapM [Vibrio
           harveyi HY01]
 gi|148868283|gb|EDL67415.1| general L-amino acid transport system permease protein AapM [Vibrio
           harveyi HY01]
          Length = 365

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       V S  +G+
Sbjct: 118 TPKRIWIWLFFVNIYPFIIAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 ALAL-----GRRSDMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFLA 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++LPQ
Sbjct: 223 EGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365


>gi|330877713|gb|EGH11862.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330965186|gb|EGH65446.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 233

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +          +   + + L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTVQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYH-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   I  S  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLAIS 213



 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTVQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLSESTQIWLSGYS 98


>gi|312278470|gb|ADQ63127.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 232

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + + ++ ++L L    +S     K  + +  +Y+  F     P LV   + +    
Sbjct: 34  LGISIGALIVALLLGLIFGAMS-STRNKVLRGISRVYVEIF--QNTPLLVQFVVVFYGIS 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G+ + P  ++  + +  YT A+I+EI+R+G+ AVP+GQ EAA++ G T
Sbjct: 91  IL--------TDGNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFT 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +    R+++LPQA+R+I+PPLT+Q +NL+KN+S    +  AD++         T   +  
Sbjct: 143 YADTMRIIILPQAVRTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
                F+Y  +   +A +  R  
Sbjct: 203 FAGAAFLYFIMCFPLATWARRKE 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV    +
Sbjct: 26  FAKGFLYTLGISIGALIVALLLGLIFGAMSSTRNKVLRGISRVYVEIFQNTPLLVQFVVV 85

Query: 149 YKSV 152
           +  +
Sbjct: 86  FYGI 89


>gi|193077847|gb|ABO12724.2| Amino acid ABC transporter permease protein [Acinetobacter
           baumannii ATCC 17978]
          Length = 229

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 9/224 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S ++G++ +      S+  + K  + +   Y  T LI  +P L
Sbjct: 11  LSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSNIKALRYIATAY--TTLIRSVPDL 63

Query: 236 VLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V++ L +  L      + +   +    ++P F++  I L+    A+  E  R    +VPR
Sbjct: 64  VIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA+A G+T  +    VL PQ MR  +P + + +  L+K ++L   +G  D+V +  
Sbjct: 123 GQIEAAMAYGMTPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQ 182

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                T Q     ++   IYL+++ +  L +  L    +   +K
Sbjct: 183 DAGRSTMQLFFFSIVAAAIYLAITTVSNLILMWLERHYSAGVRK 226


>gi|134278595|ref|ZP_01765309.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia pseudomallei 305]
 gi|134250379|gb|EBA50459.1| ABC polar amino acid family transporter, inner membrane subunit
           [Burkholderia pseudomallei 305]
          Length = 218

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F                  + + +F+ G V  L    + R       + + +LY+  F  
Sbjct: 4   FTLWDIARNLLFAARWTVLLSLIAFLGGGVTGLVLLAM-RVSPRPWLRRIVILYVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L              +++  + L+ YT A++A+I R  +
Sbjct: 61  QGTPLLMQLFLGF---FGLPLL--------GVDVSPWVAATVTLTLYTGAYLADIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP+GQ  AA +LG+T  +  R V+ PQA +  +PP     + ++K+++L   +G  +L
Sbjct: 110 EAVPQGQWSAAASLGMTWTQQLRYVVWPQAWKIAVPPTVGFLVQVVKSTALTSIIGLTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  I N   +   I  +   +Y ++   +  +   L  +  +   +
Sbjct: 170 TKTGTMITNAAFRPFPIYAMVALLYFAMCFPLTWYARVLERRYHVGRHR 218



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 36/105 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L     T  L+    +   + G ++ A R+S    +  I  +YVE+F+  P L
Sbjct: 7   WDIARNLLFAARWTVLLSLIAFLGGGVTGLVLLAMRVSPRPWLRRIVILYVELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  +       +     + L               A
Sbjct: 67  MQLFLGFFGLPLLGVDVSPWVAATVTLTLYTGAYLADIWRGCVEA 111


>gi|170736177|ref|YP_001777437.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169818365|gb|ACA92947.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 229

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    ++L L     ++       K++   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVETVKLAVLSLAASLILGLAGAA-AKLSANGVLKSVGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F +  + L     A+  E  R   ++VPRGQ+EA
Sbjct: 68  LLFYGIQILLNDVTDLLGWDQIDIDPFAAGVVTLGFIYGAYFTETFRGAFLSVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMSGWRVFHRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  + ++ L  + ++  ++
Sbjct: 188 TLDFFFFTLAAGAIYLAITTVSNVVLHHLEKRYSVGVRR 226


>gi|90413735|ref|ZP_01221723.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90325204|gb|EAS41701.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 223

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +      + T   + V+     +++++    L R +       L  LYI
Sbjct: 1   MGFDFNYMLSLMPILMKYLGTTLSMAVWGLGFALIIAITL-ALVRVYKLPVLNQLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+    +          F +  I LS + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQVFPIFIGLD---------AFSASVIGLSLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I V R Q EA++A+G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGVDRSQREASLAIGMTEMQAMRRIILPQATRIALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L   FIY  L +++    N   AK+
Sbjct: 169 LGVAEIMAKAQMEASSSFKFFEAFLAVAFIYWGLVLVLTQVQNWAEAKL 217



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +A  G+  A II   +   R+    ++  + ++Y+  FR  P LV +F LY  +
Sbjct: 19  LGTTLSMAVWGLGFALIIAITLALVRVYKLPVLNQLSQLYISFFRGTPLLVQLFLLYYGL 78

Query: 153 LSVLP 157
             V P
Sbjct: 79  PQVFP 83


>gi|307131834|ref|YP_003883850.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Dickeya dadantii 3937]
 gi|306529363|gb|ADM99293.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Dickeya dadantii 3937]
          Length = 238

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 97/224 (43%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-VLSLFATRLSRHFHEKTGKALPLLYISTF 227
           +    + L +      T   + ++  ++ + +  L A  L+        +    ++  T+
Sbjct: 5   LQQYWQALLWSDGYRLTGLAMTLWLLIVSVTIGGLMAVPLAVARVSPRRRYRLPVWAFTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLVFYSGVYSLEIVRGTDLL-NAFFRSGLNCAILALALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VP G++EAA A G +  K  R V+LP A+R  +P  +++ + +L +++LA  V   
Sbjct: 124 AIRSVPHGEIEAARAYGFSRFKQYRCVILPGALRIALPAYSNEVILMLHSTALAFTVTVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+ V   I   T Q      I   +YL++S ++     +   +
Sbjct: 184 DLLKVARDINAATYQPFYAFGIAGVMYLAVSFVLISLFRKAERR 227


>gi|222094395|ref|YP_002528454.1| ABC transporter , permease; glutamine ABC transporter , permease
           [Bacillus cereus Q1]
 gi|221238452|gb|ACM11162.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus Q1]
          Length = 177

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/181 (30%), Positives = 103/181 (56%), Gaps = 8/181 (4%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +      L ++   ++  +  + L+ + +  +F  PV+              F++  + 
Sbjct: 1   MRIAPIRILNWLGAAIVEFVRNIPLVLIAFIFYFALPVV--------GITLNGFVAGTVT 52

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+L
Sbjct: 53  LTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFL 112

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NL+KNSS+   +  ADL+  G  I  +T    ++ +     YL L+I +++ +  L  ++
Sbjct: 113 NLVKNSSILGIIAGADLMYQGDLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRL 172

Query: 393 A 393
           A
Sbjct: 173 A 173


>gi|330811273|ref|YP_004355735.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379381|gb|AEA70731.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 229

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY    +I G+P LVLI L + 
Sbjct: 14  WLTLELALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDLY--ATVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P   +    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPMLGYDDYIDLNP-LAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G+   +    VL+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMNGFQVFFRVLVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRHLEKRYSVGVR 225



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLELALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYATVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     +L      +     + LN 
Sbjct: 65  ILLIFYGGQDLLNRVAPMLGYDDYIDLNP 93


>gi|327193781|gb|EGE60658.1| amino acid ABC transporter permease [Rhizobium etli CNPAF512]
          Length = 308

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 111/259 (42%), Gaps = 7/259 (2%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P  +  +            P+    + F    +   L            + V S V G +
Sbjct: 55  PTSLSGWSRDGCGGDSRVSPEEPRPMSFTWISSYWPLLLTGAWQT--VALLVISVVFGFI 112

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQF-NFI 257
           +++     ++    +  + L   Y + F   G P L+ +  L Y +    P++      +
Sbjct: 113 IAIGL-AFAQVSGGRLTRLLARGYCTFF--RGTPLLIQLWLLYYGVGSLLPMVPGIRQSL 169

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
               +   F    ++ +   AA+ AE++R  L+AVP+G++EA  A GL+  K TR + LP
Sbjct: 170 FWPILREGFFFAAVSFTLNYAAYEAEVLRGALLAVPKGELEAGRAFGLSPWKLTRRIWLP 229

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           +A+R  +P +  + +  LK + LA  V   DL +V   +   T    E +L+    YL+L
Sbjct: 230 RAIRIALPTIAGEIVMQLKATPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLAL 289

Query: 378 SIMIALFMNRLNAKIALKE 396
           + +IA     L A++ ++ 
Sbjct: 290 TAVIARVFRGLEAQVPVRR 308



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 73/225 (32%), Gaps = 15/225 (6%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
             + +T  SSY   +L G   T  L    ++   II   +   ++S  +L   + R Y  
Sbjct: 78  RPMSFTWISSYWPLLLTGAWQTVALLVISVVFGFIIAIGLAFAQVSGGRLTRLLARGYCT 137

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPD------HSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            FR  P L+ ++ LY  V S+LP+           +L  G F      +      +    
Sbjct: 138 FFRGTPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEVL 197

Query: 189 IFVFSFV------LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                 V       G    L   +L+R         + L  I+  ++  L     +A   
Sbjct: 198 RGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKA-TPLAFTV 256

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +     V  +          P  +     L+    A IA + R 
Sbjct: 257 TVMDLYAVANKVRQDTLLVYEPLLVVTLFYLAL--TAVIARVFRG 299


>gi|321312472|ref|YP_004204759.1| sulfur-containing amino acid ABC transporter permease [Bacillus
           subtilis BSn5]
 gi|320018746|gb|ADV93732.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus
           subtilis BSn5]
          Length = 239

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F M +    +   T  +     I   S + G VL LF   L R ++      L  +YIS 
Sbjct: 5   FDMNMIGDFVPTLTAYLPVTLYILTLSLLFGFVLGLFL-ALPRIYNIPIVNQLAKVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P F +     +   AA  AEI+R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALTGLIGIDTSKMDP-FYAAVATYALSNAAAAAEIIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V +GQ EAA ++GL+  +A R ++LPQA+    P + +  ++ LK++SLA ++G 
Sbjct: 118 AGVGSVDKGQTEAAYSIGLSGSQAFRRIVLPQALVQAFPNMGNMVISSLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  ++E+ +    +Y +++++   F      +I   + +
Sbjct: 178 MDMSGRGQTLITSSNHSLEVYIALSIVYYAVAVLFEWFFRVAEKRIKKNQTR 229



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 32/75 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    ++   ++G  +   R+    +V  + +VY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILTLSLLFGFVLGLFLALPRIYNIPIVNQLAKVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             +           +
Sbjct: 84  TGLIGIDTSKMDPFY 98


>gi|66045740|ref|YP_235581.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256447|gb|AAY37543.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 220

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRIVASV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|33598571|ref|NP_886214.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33574700|emb|CAE39357.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis]
          Length = 253

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 8/241 (3%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P G       L+    T+ T A  ++ +  +GIV+ +     +R    K
Sbjct: 4   NWNWHIFLEMSPTGGIYLGTLLTGMAWTLGTAALAWILALGIGIVVGV-----ARTTQSK 58

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
             + +   Y+  F    +P LV + L Y +     PV               F+   + L
Sbjct: 59  WARIMGATYVEFF--RNIPLLVQMFLWYFVVPEILPVQLGDAIKSIPPPWGIFIPAVLCL 116

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             YT++ +AE VR+G+ + P GQ  AA ALG+   +  R VLLP + R I+PPLTS+ LN
Sbjct: 117 GFYTSSRVAEQVRAGIESRPAGQRMAATALGMRPSQVYRYVLLPTSFRIILPPLTSELLN 176

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+KN+S+A  +   +LV    ++   + Q  E        Y  L++++   M  +  ++A
Sbjct: 177 LIKNTSVAFTIDLLELVGAARSMQEFSFQVFEAFAGATLCYFLLNLIVLRAMRYIETRLA 236

Query: 394 L 394
           +
Sbjct: 237 V 237



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/73 (38%), Positives = 35/73 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T   A    I A  IG +VG  R + +K    +   YVE FRNIP LV 
Sbjct: 20  YLGTLLTGMAWTLGTAALAWILALGIGIVVGVARTTQSKWARIMGATYVEFFRNIPLLVQ 79

Query: 145 IFFLYKSVLSVLP 157
           +F  Y  V  +LP
Sbjct: 80  MFLWYFVVPEILP 92


>gi|257487795|ref|ZP_05641836.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|331008516|gb|EGH88572.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 220

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRVVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|50121893|ref|YP_051060.1| ABC transporter permease [Pectobacterium atrosepticum SCRI1043]
 gi|49612419|emb|CAG75869.1| ABC transporter permease protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 221

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 17/233 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +              L    +T++      V    LG+VL +F     R F ++      
Sbjct: 3   YQWDFSLVWDNIPVLLKGLGVTLELWLIAGVLGTALGLVLGIF-----RVFGKRWLSLPA 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             ++  F     P L+ +      ++  PVL    F         F +  +AL+ Y+AA+
Sbjct: 58  RFFVEIF--RNTPVLIQLI---WFYYAFPVLVGVQF-------STFAAAVLALTLYSAAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI R+GL ++  GQ E A ALG+ H    R V+LPQ +R+++P LT++ + L K +SL
Sbjct: 106 CTEIFRAGLQSIDHGQWEGAKALGMRHTVILRRVVLPQVLRNMLPALTNRMIELAKVTSL 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +L+  G  + +   + +EI+ +   +Y  L    +    RL  +  
Sbjct: 166 ASILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVLIWPGSYLAARLERRFR 218



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++        +L G   T  L     +  T +G ++G  R+   + ++   R +VE+FR
Sbjct: 6   DFSLVWDNIPVLLKGLGVTLELWLIAGVLGTALGLVLGIFRVFGKRWLSLPARFFVEIFR 65

Query: 138 NIPPLVVIFFLYKSVL 153
           N P L+ + + Y +  
Sbjct: 66  NTPVLIQLIWFYYAFP 81


>gi|209551038|ref|YP_002282955.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536794|gb|ACI56729.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 216

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 13/192 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    +T +     YI+ F   G P L+ + + Y                       
Sbjct: 38  ALGRTSKNRTARVATSGYIALF--QGTPLLMQLFVVYY-----------GVALLGIDVNA 84

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ EI R  + AVP+GQ EAA ALGL +    + V+LPQA++  +P
Sbjct: 85  WIAVAIAFTLHASAFLGEIWRGSIEAVPKGQSEAANALGLHYVSRMKDVILPQALKISMP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  VGF +L   G  I NQT + + +  I   IY  +   ++   
Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQTYRPLLVFGIVGVIYFIICWPLSHLG 204

Query: 386 NRLNAKIALKEK 397
           + L  ++A   +
Sbjct: 205 SGLEKRMAKAVR 216


>gi|167564742|ref|ZP_02357658.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia oklahomensis EO147]
 gi|167574722|ref|ZP_02367596.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia oklahomensis C6786]
          Length = 248

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 13/226 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +F  S VLG +LS+    + R            LYI  F   G P L
Sbjct: 12  LRQLLAAVPTTLGLFFSSLVLGGLLSIAVVAM-RVSPHWLPNRFARLYILIF--RGSPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + + L Y        LGQF  I  S + P     ++   ++L+  TA + AEI+R GL+A
Sbjct: 69  IQMFLVYY------GLGQFGVIRESFMWPMLRDPYICAVLSLALCTAGYTAEIIRGGLMA 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ+EA  A+GL+     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  
Sbjct: 123 VPVGQIEAGYAIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTG 182

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V   II QT +  E+ +    IYL L+ +I   +  L  +++   +
Sbjct: 183 VAQQIIQQTYRTTEVFVCAALIYLGLNFVIVRVLGALEWRLSRHLR 228



 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 38/90 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +   +     +L     T  L FS ++   ++   V A R+S + L     R+Y+ +F
Sbjct: 3   LDFDFLTDTLRQLLAAVPTTLGLFFSSLVLGGLLSIAVVAMRVSPHWLPNRFARLYILIF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           R  P L+ +F +Y  +     I +  +   
Sbjct: 63  RGSPLLIQMFLVYYGLGQFGVIRESFMWPM 92


>gi|227833204|ref|YP_002834911.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454220|gb|ACP32973.1| putative ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 292

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 4/258 (1%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD--TNAKIFVFSFVLGIVLS 201
            +F    ++L++  I   +    FG     + L    +         I + + ++G+V  
Sbjct: 7   WVFATLLALLAIWFIISSARNEAFGWGTYFQYLFDTRIATAALHTIAITILAMIIGVVGG 66

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
             A  + R         +  +++  F    +   ++        +    LG         
Sbjct: 67  -AALAVMRMSPNPVLGGVSWVFLWLFRGTPIYVQLVFWGLLSALYQSINLGFTEISLTEV 125

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++  F+   + L    AA++AEIVRSG+ +VP GQ EA+ ALG+      R  +LPQAMR
Sbjct: 126 LNNAFLLSVLGLGLNEAAYMAEIVRSGISSVPEGQKEASKALGMGWWMTMRRTVLPQAMR 185

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            IIPP  +++++LLK SSL VA+ + A++      I     + I ++++    YL+++ +
Sbjct: 186 IIIPPTGNEFISLLKTSSLVVAIPYTAEIFGRATDISAALFEPIPLLMVAATWYLAITSL 245

Query: 381 IALFMNRLNAKIALKEKK 398
           + +    L  +      +
Sbjct: 246 LMVGQYFLERRFERGATR 263



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 22/146 (15%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           +   LL  +   + ++         N + G G                Y  D+  ATA L
Sbjct: 8   VFATLLALLAIWFIIS------SARNEAFGWG------------TYFQYLFDTRIATAAL 49

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
               +T  +    MI   + G  +   R+S N ++  +  V++ +FR  P  V + F   
Sbjct: 50  ----HTIAITILAMIIGVVGGAALAVMRMSPNPVLGGVSWVFLWLFRGTPIYVQLVFWGL 105

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGL 176
                  I      +     LNN  L
Sbjct: 106 LSALYQSINLGFTEISLTEVLNNAFL 131


>gi|213966207|ref|ZP_03394392.1| glutamate ABC transport system, permease protein [Corynebacterium
           amycolatum SK46]
 gi|213951142|gb|EEB62539.1| glutamate ABC transport system, permease protein [Corynebacterium
           amycolatum SK46]
          Length = 318

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 15/290 (5%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           ++ T       +         R    +   I   ++ +   K         +        
Sbjct: 6   LMATRATVLYDAPGPKAQRFNRTLTWIVAAITVAILAWVGMKLADKGQFESNKWSFFLES 65

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                  L     T+       V + V+G +L +      R       + L  + +  F 
Sbjct: 66  TTWTTYILPGLVSTIIAAVVSIVLALVIGALLGV-----GRLSPIAPVRWLCSVIVEFF- 119

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              +P LVL+   Y + F    L   N++G       F ++   L+ Y  + I E +RSG
Sbjct: 120 -RAIPVLVLMLFAYSV-FAIWQLFPSNYLG-------FAAVVFGLTMYNGSVIGETLRSG 170

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P+GQ EAAIALGL+HR+    +LLPQA+ +++P + SQ +  LK+S+L   +G+ +
Sbjct: 171 IESLPKGQREAAIALGLSHRQTMVTILLPQAVAAMLPAIISQMVIALKDSALGYMIGYVE 230

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +V  G  +    G  I  +++   I ++++  +A    R+ +++     +
Sbjct: 231 VVRSGRQLGEYYGAMIPSLVVVAIILIAINFGLANLAERIESQLRAGRAR 280



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      +  N ++  I+A +   I  W                    L+++  
Sbjct: 10  RATVLYDAPGPKAQRFNRTLTWIVAAITVAILAWVGMK----------------LADKGQ 53

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           FE ++    +   +++ T IL G V+T   A   ++ A +IG L+G GRLS    V W+C
Sbjct: 54  FESNKWSF-FLESTTWTTYILPGLVSTIIAAVVSIVLALVIGALLGVGRLSPIAPVRWLC 112

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            V VE FR IP LV++ F Y         P + +     +F
Sbjct: 113 SVIVEFFRAIPVLVLMLFAYSVFAIWQLFPSNYLGFAAVVF 153


>gi|23008921|ref|ZP_00050163.1| COG0765: ABC-type amino acid transport system, permease component
           [Magnetospirillum magnetotacticum MS-1]
          Length = 209

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 2/209 (0%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDK 248
            VF+  L  + +     L           +P L + +   +  +  L L+ + +  +F  
Sbjct: 1   MVFTLTLTALAASGGLVLGTGLALVRLSGVPGLTHAAKLYVELMRALPLVLVIFWFYFLM 60

Query: 249 PVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           P LG +     S +    F S  I  + + AA+ AEI+R+G+ +VP+GQ  AA ALG+++
Sbjct: 61  PYLGAWATGAASPIQVGPFASALITFTLFEAAYFAEIMRAGIQSVPKGQSAAARALGMSY 120

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  RLV+LPQA R+++P L +Q + L +++SL   +   D +     +  + G+ +E+ 
Sbjct: 121 AQTMRLVVLPQAFRNMLPLLLTQTIVLFQDTSLVYVLSLTDFLGAASKVAQRDGRLVEMY 180

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L    +Y ++    +L + RL A+IA+  
Sbjct: 181 LFAALVYFAVCFAASLLVRRLQARIAVVR 209


>gi|331702183|ref|YP_004399142.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329129526|gb|AEB74079.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 234

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 114/232 (49%), Gaps = 19/232 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           +        L    +T+  +    + S++ G++L +      ++     G          
Sbjct: 8   YSWINIRFLLEGAWVTILVSVCSIILSYIFGVILGIIRYVEIKYLSAIVG---------- 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+I  +  L LI + +  +F  P +                +  IA++ + +A +AEIVR
Sbjct: 58  FVIDIIRNLPLILIIFFTYFGLPNI--------GFKPDPIWASVIAMAVFESAMVAEIVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++++P GQME A + G+++ +A R ++LPQA++++IP + SQ+++L+K++SLA  +  
Sbjct: 110 AGIVSIPVGQMEGARSTGMSYWQALRYIILPQAIKNMIPAIVSQFISLVKDTSLATIIVL 169

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL++    I  Q T   I + L    +Y  +   ++L    L+ ++   +K
Sbjct: 170 PDLMNHAQIIYGQNTNYTIPMFLALAVMYFIVCYSLSLLSQYLDHRLGTAKK 221



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 38/82 (46%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +I + I G ++G  R    K ++ I    +++ RN+P 
Sbjct: 9   SWINIRFLLEGAWVTILVSVCSIILSYIFGVILGIIRYVEIKYLSAIVGFVIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           +++IFF Y  + ++   PD   
Sbjct: 69  ILIIFFTYFGLPNIGFKPDPIW 90


>gi|15596537|ref|NP_250031.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|116049292|ref|YP_791905.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218892555|ref|YP_002441424.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254234459|ref|ZP_04927782.1| hypothetical protein PACG_00311 [Pseudomonas aeruginosa C3719]
 gi|254239711|ref|ZP_04933033.1| hypothetical protein PA2G_00335 [Pseudomonas aeruginosa 2192]
 gi|313106331|ref|ZP_07792574.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
 gi|9947280|gb|AAG04729.1|AE004563_6 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|115584513|gb|ABJ10528.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166390|gb|EAZ51901.1| hypothetical protein PACG_00311 [Pseudomonas aeruginosa C3719]
 gi|126193089|gb|EAZ57152.1| hypothetical protein PA2G_00335 [Pseudomonas aeruginosa 2192]
 gi|218772783|emb|CAW28568.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310879076|gb|EFQ37670.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
          Length = 222

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 7/219 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      M    K+ V   + G+ L      L R  H K    +   Y++ F      ++
Sbjct: 11  LPSLWEGMLMTLKLMVLGVLGGVALGTVL-ALMRLSHSKLLSNIAGFYVNYFR-----SI 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +F  P + ++   G  T    F S  +A   + AA+  EIVR+G+ A+P+G
Sbjct: 65  PLLLVITWFYFAVPFILRW-ITGEDTPVGAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKG 123

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+T+ +  RLV+LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 124 QMGAAQALGMTYGQTMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARS 183

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  GQA E ++    +Y  +S   +  + RL  ++ +
Sbjct: 184 RGDIIGQANEFLIFAGLVYFVVSFTASFAVKRLQKRLTV 222



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L   G++    +GT++   RLS +KL++ I   YV  FR+IP L+VI + 
Sbjct: 14  LWEGMLMTLKLMVLGVLGGVALGTVLALMRLSHSKLLSNIAGFYVNYFRSIPLLLVITWF 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  +L                               
Sbjct: 74  YFAVPFILRWITGEDTPVGAFTSCLVAFMMFEAAYYCEI 112


>gi|330958424|gb|EGH58684.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 216

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 13/182 (7%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +    L   Y+S F     P +V +   Y L F  P+             P   + 
Sbjct: 45  RSQVRLVHYLSKAYLSFF--RNTPLMVQL---YVLFFALPL--------AGVAFPAITTG 91

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ ++P L +
Sbjct: 92  VIGLGCYYAAYIAEACRGAIEDIPAGQWEAARALDFDRGDTWRRIILPQALKPMLPVLGN 151

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             + + K + L   +   +L      I   T +  E   +   ++L++S+  +L  N L 
Sbjct: 152 YLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFNYLE 211

Query: 390 AK 391
            +
Sbjct: 212 RR 213


>gi|325122857|gb|ADY82380.1| histidine ABC transporter, permease protein HisQ [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 229

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 9/234 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        LS   +T+       + S ++G++ +      S+    K  + +   Y  
Sbjct: 1   MFFSGFGPLLLSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSSIKILRYIATAY-- 53

Query: 226 TFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI  +P LV++ L +  L      + +   +    ++P F++  I L+    A+  E 
Sbjct: 54  TTLIRSVPDLVIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R    +VP+GQ+EAA+A G+T  +    VL PQ MR  +P + + +  L+K ++L   +
Sbjct: 113 FRGAFQSVPKGQIEAAMAYGMTPWQVFYRVLFPQMMRFALPGIGNNWQVLIKATALVSII 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D+V +       T Q     ++   IYL+++ +  L +  L  + +   +K
Sbjct: 173 GLTDIVKITQDAGRSTMQLFFFSIVAAAIYLAITTVSNLILMWLERRYSAGVRK 226


>gi|253689164|ref|YP_003018354.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755742|gb|ACT13818.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 238

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 97/230 (42%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   L+   +T+       V   ++ + L++      R F          
Sbjct: 6   QQYWQPLLWSDGYRLTGLAMTLWLLISSVVIGGLMALPLAIARVSPRRRFSFPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++ T++  G P  V + + Y   +   ++   + +  +          +AL+  T A+ 
Sbjct: 60  -WLFTYVFRGTPLYVQLLVFYSGVYSLEIVRGTDLL-NAFFRSGLNCAILALALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA
Sbjct: 118 TEIFAGAIRAVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNEVILMLHSTALA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   D++ +   I   T Q      I   IYL++S ++     R   +
Sbjct: 178 FTVTVPDILKIARDINAATYQPFYAFGIAAVIYLAISFVLIGLFRRAERR 227


>gi|146321226|ref|YP_001200937.1| amino acid ABC transporter, permease protein [Streptococcus suis
           98HAH33]
 gi|253752083|ref|YP_003025224.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis SC84]
 gi|253753908|ref|YP_003027049.1| amino acid ABC transporter, permease protein [Streptococcus suis
           P1/7]
 gi|253755217|ref|YP_003028357.1| amino acid ABC transporter, permease protein [Streptococcus suis
           BM407]
 gi|145692032|gb|ABP92537.1| amino acid ABC transporter, permease protein [Streptococcus suis
           98HAH33]
 gi|251816372|emb|CAZ52003.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis SC84]
 gi|251817681|emb|CAZ55429.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis BM407]
 gi|251820154|emb|CAR46492.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis P1/7]
 gi|292558666|gb|ADE31667.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus suis GZ1]
 gi|319758450|gb|ADV70392.1| amino acid ABC transporter, permease protein [Streptococcus suis
           JS14]
          Length = 232

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                      +              I V +F++ + L +    LS     K  K +  +
Sbjct: 8   PYAWENWVSYFKDFPIFFQGFLFTLAISVGAFIMAMFLGIVFGSLS-SSKNKVLKIIARV 66

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+        P LV   + Y   +  P++  +  +        + +  I +  Y  A+IA
Sbjct: 67  YVE--YYQNTPLLVQFMIVY---YGLPLISNYVLMPSI-----YWTAVICVGLYHGAYIA 116

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++R+G+ AVP GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q +NL+KN++   
Sbjct: 117 EVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVA 176

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +  AD++ +  +        I       F+Y  +   +A +  R+  K
Sbjct: 177 IISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEEK 225



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++    I A  +G + G+   S NK++  I RVYVE ++N P LV    +
Sbjct: 24  FFQGFLFTLAISVGAFIMAMFLGIVFGSLSSSKNKVLKIIARVYVEYYQNTPLLVQFMIV 83

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y  +  +        +  
Sbjct: 84  YYGLPLISNYVLMPSIYW 101


>gi|320156511|ref|YP_004188890.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O]
 gi|319931823|gb|ADV86687.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 365

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 122/274 (44%), Gaps = 16/274 (5%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            Y+ +      L       +  + +  +  +  ++   ++    GL            + 
Sbjct: 102 FYITLAIFTVLLAYEKTPKRMWIWLFFVNIYPFIVAALLYGGVFGLEVVETHKWGGLLVT 161

Query: 191 VFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +   ++GIV+SL    A  L R       ++L  +YI  +    L T++ +A        
Sbjct: 162 LIIALVGIVVSLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMA-------- 213

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +    F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+
Sbjct: 214 --SVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTY 271

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAI 364
            K   L++LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A 
Sbjct: 272 WKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFAT 331

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +    ++      ++ +   L  K+    K+
Sbjct: 332 ESYVFVALVFWVFCFGMSRYSIWLENKLHTGHKR 365


>gi|323526380|ref|YP_004228533.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383382|gb|ADX55473.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 229

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 3/212 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V S  + +VL L    +++   ++  + +   Y  T LI  +P LVL+ L +    
Sbjct: 18  IELSVLSLAVAVVLGLLG-AVAKLSQDRGFRRIASTY--TTLIRSVPDLVLMLLIFYSIQ 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                    F         F +  + L     A+ AE  R   +AVPRGQ+EA  A G+ 
Sbjct: 75  IAVNDLTDAFGFMQFDIDPFAAGVLTLGFIYGAYFAETFRGAFLAVPRGQLEAGAAYGMN 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +L PQ MR  +P + + +  L+K ++L   +G AD+V         T +    
Sbjct: 135 GARIFRRILFPQMMRFALPGIGNNWQVLIKATALVSIIGLADVVKAAQDAGRSTFKMFLF 194

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++    IYL+++ +  + ++ L  + +   ++
Sbjct: 195 VMCAALIYLAMTTVSNIVLSGLEKRFSTGTRQ 226


>gi|261210915|ref|ZP_05925205.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260839890|gb|EEX66490.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 365

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 123 WVWLVFVNIYPFFAAILLYGGLFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 182

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 183 RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSQGSEIDKLLR 232

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 233 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 292

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 293 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWVFCFGMSRYS 352

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 353 IWLEGKLHTGHKR 365



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 5/198 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P + V+F   
Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMAS 214

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFAT 205
             +   L        L   +       +     +       +    +     + LS +  
Sbjct: 215 VMLPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKK 274

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSP 264
                  +     +P +  +   +F   +LVLI   +  L   +      N++G +T S 
Sbjct: 275 MGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESY 334

Query: 265 EFMSLYIALSCYTAAFIA 282
            F++L   + C+  +  +
Sbjct: 335 VFVALVFWVFCFGMSRYS 352


>gi|149909991|ref|ZP_01898640.1| arginine/ornithine transport protein AotM [Moritella sp. PE36]
 gi|149807005|gb|EDM66964.1| arginine/ornithine transport protein AotM [Moritella sp. PE36]
          Length = 236

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 93/222 (41%), Gaps = 5/222 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L+          ++   S V+G  L++    +    +    + +   ++ T++ 
Sbjct: 14  MFTPSTLNEYWDGTVLTVQLAFLSVVIGFFLAVPLAIMRASQYVWLSRGI---WLFTYVF 70

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y  +    + G  +      +   F    +A    TAA+  EI+R  L
Sbjct: 71  RGTPLLIQLYLIY--YGVTMIDGIQDSAIWFLLEDAFYPCLLAFVLNTAAYSTEIIRGSL 128

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +   +G++EAA A G++  +  R ++LP A R  +P  +++ + +L  +S+A  V   D+
Sbjct: 129 LTTDKGEIEAAQAYGMSDFQVLRRIILPSAFRRALPAYSNEVIFMLHATSIASVVTLVDI 188

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              G  + ++     E  +    IYL L   I     RL  +
Sbjct: 189 TGAGYNVYSRFYAPFEAFIFAGAIYLCLCFAIFAVFKRLEKR 230



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G V T  LAF  ++    +   +   R S    ++    ++  VFR  P L+ ++ +
Sbjct: 23  YWDGTVLTVQLAFLSVVIGFFLAVPLAIMRASQYVWLSRGIWLFTYVFRGTPLLIQLYLI 82

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  V  +  I D +I  
Sbjct: 83  YYGVTMIDGIQDSAIWF 99


>gi|116691157|ref|YP_836780.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|116649246|gb|ABK09887.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 226

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF +G++L+ F   L+R F  +  +A+   YI  F   G P LV + + +    
Sbjct: 24  VPLTLASFAIGLLLA-FGAALTRLFGPRWAQAVVRFYIWLF--RGSPLLVQLFVIFY--- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T
Sbjct: 78  --------GLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R  +LPQA R  +  L++ +++L+K++SLA  +   ++      I   T + + +
Sbjct: 130 RAQALRRAILPQAARVALSALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPLIL 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 IYL  S +++    RL  +   
Sbjct: 190 YTEAALIYLLFSSVLSSLQRRLELRFGR 217



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G V T  L  +      ++       RL   +    + R Y+ +FR  P LV +F +
Sbjct: 16  LVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAVVRFYIWLFRGSPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + +V  + D       G  LN
Sbjct: 76  FYGLPNVGIVLDPLTAAVIGFSLN 99


>gi|318603944|emb|CBY25442.1| glutamate aspartate transport system permease protein GltK
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 369

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P        T +++G V          +      T+ G GR  
Sbjct: 79  WVFIHARFG-QFMYGLYPIEQRWRINTTLIIGLVT---------LTPLFWRTMPGRGR-- 126

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  + PL+V   LY     +  +                     T
Sbjct: 127 -----------YLAVWAVVYPLLVWVMLYGGFFGLNRVETRQ-------------WGGLT 162

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L     +R       + L +++I  +    L T++ ++ 
Sbjct: 163 LTLIIAAVGIAGALPLGILLAL-----ARRSSMPVVRILSVVFIEFWRGVPLITVLFMS- 216

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EA 
Sbjct: 217 ---------SVMLPLFMTEGTSIDKLIRALVGVVLFQSAYVAEVVRGGLQALPKGQTEAT 267

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 268 ESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 327

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 328 AWLGMSTEGYVFAAAVYWIFCFSMSRYSQHLEKRFHTGR 366


>gi|260461009|ref|ZP_05809258.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033043|gb|EEW34305.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 230

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L F  L       + + +F  G ++ L    + R    +  + L   YI  F+ 
Sbjct: 5   DFGPNELMFLLLATRWTILLALIAFAGGGLIGLVVAAI-RVAPARPLRWLAAGYIQFFM- 62

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + Y                       +++  +  S    AF  EI R  +
Sbjct: 63  -GTPILIQLFMAYYGSSFL-----------GYRPDPWVAAAVTFSLNGGAFFGEIFRGAI 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EAA ALG    +  RLV++PQA+R ++PP     + ++K +S+A  +G  +L
Sbjct: 111 EAIPKGQWEAATALGFRFVRTLRLVIIPQAVRLMLPPTVGFMVQIVKTTSIASLIGLTEL 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 +   T Q + +      IY +L   ++L+   L  + A    +
Sbjct: 171 ARAATQVNTVTFQPVMVFGTVSIIYFALCWPLSLYAGYLERRFATGTVR 219



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 36/103 (34%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L+    T  LA        +IG +V A R++  + + W+   Y++ F   P L+ +
Sbjct: 11  LMFLLLATRWTILLALIAFAGGGLIGLVVAAIRVAPARPLRWLAAGYIQFFMGTPILIQL 70

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           F  Y     +   PD  +       LN              A 
Sbjct: 71  FMAYYGSSFLGYRPDPWVAAAVTFSLNGGAFFGEIFRGAIEAI 113


>gi|256828614|ref|YP_003157342.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256577790|gb|ACU88926.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 222

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            + ++ V S +LGI   +      R F     +AL   Y + F   G P ++ + + Y  
Sbjct: 22  VSLQLIVPSAILGIFFGVVVGA-CRAFGGGVLRALANGYAALF--RGTPLVIQLFILY-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           + +  +  +  +AA+ +E +R GL+++ RGQ+ AA ALG
Sbjct: 77  ---------FGLPNVGIYFQPYTAAVLGFTLCSAAYHSEYIRGGLLSIKRGQVLAAQALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +       +++PQA R  +P   ++ + L+K SSLA  +   +L      + +++ +  
Sbjct: 128 FSTFTTLIWIIIPQAFRRALPGCGNEIVYLIKYSSLAYVITCFELTGQAKIVASESFRFS 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E+ ++    YL L  + +  + RL  ++ +
Sbjct: 188 EVFMVVGVYYLILVSVASYGLRRLEKRLEI 217



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 9/133 (6%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G + +  L     I     G +VGA R     ++  +   Y  +FR  P ++ +F 
Sbjct: 15  ALNKGVLVSLQLIVPSAILGIFFGVVVGACRAFGGGVLRALANGYAALFRGTPLVIQLFI 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT---------MDTNAKIFVFSFVLGI 198
           LY  + +V            G  L +       +              A+   FS    +
Sbjct: 75  LYFGLPNVGIYFQPYTAAVLGFTLCSAAYHSEYIRGGLLSIKRGQVLAAQALGFSTFTTL 134

Query: 199 VLSLFATRLSRHF 211
           +  +      R  
Sbjct: 135 IWIIIPQAFRRAL 147


>gi|330970134|gb|EGH70200.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 233

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +       +  +   + I L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAGYVSYH-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   I  +  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLAIS 213



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LA      A  I  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLSESTQIWLANYS 98


>gi|323142250|ref|ZP_08077084.1| arginine ABC transporter, permease protein ArtQ
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413313|gb|EFY04198.1| arginine ABC transporter, permease protein ArtQ
           [Phascolarctobacterium sp. YIT 12067]
          Length = 218

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 13/223 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +      +    K   FS ++G     F   L      +    L  +YIS F   G P
Sbjct: 9   PYIPLLATAVWITLKFTFFSTIMGF-FGGFILALITLSKNRVLSFLAKIYISVF--RGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + L Y   F  P L  +             +  ++    +AA+I+E +R G++AV 
Sbjct: 66  LLVQLMLIY---FATPQLTSYTI-------SALEAGVLSFGLNSAAYISEALRGGILAVD 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E A++LG+   +    ++LPQA+++ +P L ++ + LLK+SSL   +G AD +   
Sbjct: 116 KGQWEGAMSLGVPKHRFLLDIILPQAIKNALPSLVNESIMLLKDSSLVSVIGVADTLRWA 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             I  +T +A E  ++   +Y  L + +      L  K+ + +
Sbjct: 176 DLIQAKTFRAFEAFIVAAAVYYVLVMALNFLGGLLEKKVRVSD 218



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 36/80 (45%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ ++    Y   +      T    F   I     G ++    LS N++++++ ++Y+ V
Sbjct: 1   MLDFSVLEPYIPLLATAVWITLKFTFFSTIMGFFGGFILALITLSKNRVLSFLAKIYISV 60

Query: 136 FRNIPPLVVIFFLYKSVLSV 155
           FR  P LV +  +Y +   +
Sbjct: 61  FRGTPLLVQLMLIYFATPQL 80


>gi|269962689|ref|ZP_06177034.1| amino acid ABC transproter, permease protein [Vibrio harveyi 1DA3]
 gi|269832612|gb|EEZ86726.1| amino acid ABC transproter, permease protein [Vibrio harveyi 1DA3]
          Length = 223

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS F   G P LV + L   L++  P +  F           F +  I L+ + AA++A
Sbjct: 58  YISFF--RGTPLLVQLFL---LYYGLPQIFPF-----MVGIDAFSAAVIGLTLHFAAYMA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA 
Sbjct: 108 ESIRAAIIGIDRSQMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 168 TLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 34/71 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLVFSLILAVILANIRVFKLPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  + P  
Sbjct: 75  YYGLPQIFPFM 85


>gi|121610275|ref|YP_998082.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554915|gb|ABM59064.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 217

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 102/222 (45%), Gaps = 14/222 (6%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
            F          + + +F+ G +  L A  LSR         L   +   F   G P L+
Sbjct: 10  WFILQAAQWTVLLSLVAFIGGAIGGL-AIALSRTSGNVVLVRLSTAFTQVF--QGTPLLM 66

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            + L +   F  P+L              +++  IAL   T+AF+ EI R  + A+P+GQ
Sbjct: 67  QLFLAF---FGAPIL--------GFEVSPWLAASIALILNTSAFLGEIWRGCIQAIPKGQ 115

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALGL +    RLV+LPQA +  +PP     + +LK +SLA  +GF ++   G  I
Sbjct: 116 WEAAYALGLNYVPRMRLVVLPQAWQIALPPTVGYLVQVLKGTSLAAIIGFTEITRAGQII 175

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            N T Q + +  +   IY +L   ++L   R+  ++ L   +
Sbjct: 176 NNATFQPLIVFSVVGAIYFALCWPLSLLAGRMERQLKLATTR 217



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 32/102 (31%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             IL     T  L+    I   I G  +   R S N ++  +   + +VF+  P L+ +F
Sbjct: 10  WFILQAAQWTVLLSLVAFIGGAIGGLAIALSRTSGNVVLVRLSTAFTQVFQGTPLLMQLF 69

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             +     +       +     + LN              A 
Sbjct: 70  LAFFGAPILGFEVSPWLAASIALILNTSAFLGEIWRGCIQAI 111


>gi|302186219|ref|ZP_07262892.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|330941852|gb|EGH44589.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330953423|gb|EGH53683.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
 gi|330981318|gb|EGH79421.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 220

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|293603255|ref|ZP_06685686.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
 gi|292818344|gb|EFF77394.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
          Length = 238

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 3/205 (1%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           V G+V +L    +S       G  L L  IS + IF  P+  ++ L   L     +   +
Sbjct: 22  VGGLVATLGLAAISLALALPCGVLLALGRISPYRIFYWPSSAVVYLVRGLPLLMFIFWAY 81

Query: 255 NFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F+      P     ++ +AL CY +A++AEI+R+G+ A+P GQ EA+ ALGL++ +  R
Sbjct: 82  FFVPLIIGRPVAGTTTMVVALVCYESAYLAEIIRAGIQALPPGQQEASRALGLSYMQTMR 141

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWM 371
            V+LPQA+ +++P + SQ+++ +K +SLA  +   +L      I +    +  ++  +  
Sbjct: 142 RVILPQALYNMLPSMLSQFVSTVKETSLAYVISVQELTYAANQINSVLLTKPFQVFGLLA 201

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
             Y  L+  ++  ++    +I  + 
Sbjct: 202 LTYFILNFGLSSLVHLTERRIGRRR 226


>gi|145637071|ref|ZP_01792734.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittHH]
 gi|145269725|gb|EDK09665.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittHH]
          Length = 221

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F    +A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVLA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|121597593|ref|YP_990724.1| glutamine ABC transporter permease protein [Burkholderia mallei
           SAVP1]
 gi|124382114|ref|YP_001025207.1| glutamine ABC transporter permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126443854|ref|YP_001064262.1| glutamine ABC transporter permease [Burkholderia pseudomallei 668]
 gi|126445790|ref|YP_001079561.1| glutamine ABC transporter permease protein [Burkholderia mallei
           NCTC 10247]
 gi|126458223|ref|YP_001077186.1| glutamine ABC transporter permease [Burkholderia pseudomallei
           1106a]
 gi|134281792|ref|ZP_01768499.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|166998959|ref|ZP_02264809.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|167744401|ref|ZP_02417175.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 14]
 gi|167821596|ref|ZP_02453276.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 91]
 gi|167829940|ref|ZP_02461411.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 9]
 gi|167851397|ref|ZP_02476905.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei B7210]
 gi|167908342|ref|ZP_02495547.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167916696|ref|ZP_02503787.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 112]
 gi|167924541|ref|ZP_02511632.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei BCC215]
 gi|226199275|ref|ZP_03794835.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|238563691|ref|ZP_00438452.2| glutamine ABC transporter, permease protein [Burkholderia mallei
           GB8 horse 4]
 gi|242313823|ref|ZP_04812840.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|254177202|ref|ZP_04883858.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|254182415|ref|ZP_04889009.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|254192463|ref|ZP_04898902.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|254203623|ref|ZP_04909984.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|254205492|ref|ZP_04911845.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|254296638|ref|ZP_04964094.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|121225391|gb|ABM48922.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|126223345|gb|ABN86850.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 668]
 gi|126231991|gb|ABN95404.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106a]
 gi|126238644|gb|ABO01756.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|134246854|gb|EBA46941.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 305]
 gi|147745862|gb|EDK52941.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           FMH]
 gi|147755078|gb|EDK62142.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           JHU]
 gi|157806531|gb|EDO83701.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 406e]
 gi|160698242|gb|EDP88212.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|169649221|gb|EDS81914.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei S13]
 gi|184212950|gb|EDU09993.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1655]
 gi|225928682|gb|EEH24709.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|238520179|gb|EEP83641.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           GB8 horse 4]
 gi|242137062|gb|EES23465.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1106b]
 gi|243064781|gb|EES46967.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           PRL-20]
 gi|261826656|gb|ABN00010.2| glutamine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
          Length = 235

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 13/234 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
             + + F        L      +     I  F    G ++ + A  + R +       L 
Sbjct: 14  RELNVQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAG-MFRAYGPAVLNVLA 72

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI   LI G P +V +     L+F  P+L      G S       +  +A++  + A+
Sbjct: 73  QVYIE--LIRGTPIVVQVMF---LYFALPLLAHVRIDGLS-------AAVVAITLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR  L+++P+G  EA +A+GL+  +    ++ P A R +I PL +Q +  LK++SL
Sbjct: 121 LAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSL 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + +G  +L   G  II    QA+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 181 FIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRI 234


>gi|22536880|ref|NP_687731.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76787176|ref|YP_329464.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798197|ref|ZP_00780448.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|22533730|gb|AAM99603.1|AE014224_6 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76562233|gb|ABA44817.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76586460|gb|EAO62967.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
          Length = 231

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 10/179 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K GK +  +Y+  F     P LV +   Y         G      G  +   F +  
Sbjct: 55  SKSKVGKLISRIYVEVF--QNTPLLVQMVFVYY--------GLAIISNGHVMISAFFTAV 104

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+PP+T+Q
Sbjct: 105 LCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +NL+KN+S    +  AD++ V       T   I         Y  +   +A +  +  
Sbjct: 165 VVNLIKNTSTVAIISGADIMFVAKAWAYDTTNYIPAFAGAAIFYFVICFPLASWARKQE 223



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++      GF+ T  ++F  ++ A I+G L G    S +K+   I R+YVEVF+N P LV
Sbjct: 19  NHFDLFFKGFLYTLGISFGALLLALILGILSGGLSTSKSKVGKLISRIYVEVFQNTPLLV 78

Query: 144 VIFFLYKSV 152
            + F+Y  +
Sbjct: 79  QMVFVYYGL 87


>gi|300716053|ref|YP_003740856.1| Arginine transport system permease protein [Erwinia billingiae
           Eb661]
 gi|299061889|emb|CAX59005.1| Arginine transport system permease protein [Erwinia billingiae
           Eb661]
          Length = 238

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRL--SRHFHEKTG--------KALPLLYISTFLIFGLPT 234
               + V + V+G++L++       +R               + LP + +  F+ FG   
Sbjct: 13  MTVGLAVSALVVGLILAMIFAAWESARWRPVAWLGTGLVTLFRGLPEILVVLFVYFGASQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + ++           I    VSP F+   IALS   A++ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTVNLGLFSFPVQVNIQNFDVSP-FLCGVIALSILYASYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALG+        ++LPQ  R  +P L +Q+L LLK+++L   +   D++   
Sbjct: 132 VGQWESGQALGMKTPAIFFRLILPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     L+   IYL ++++    + R++A+    E+
Sbjct: 192 KSIAARTQEPFTWYLMAAAIYLVITLLSQQVLKRIDARATRFEQ 235



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 41/101 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA S ++   I+  +  A   +  + VAW+    V +FR +P ++V+ F+Y     +
Sbjct: 14  TVGLAVSALVVGLILAMIFAAWESARWRPVAWLGTGLVTLFRGLPEILVVLFVYFGASQL 73

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           L        +  G+F     ++     +       +   +L
Sbjct: 74  LLTLSDGFTVNLGLFSFPVQVNIQNFDVSPFLCGVIALSIL 114


>gi|269964207|ref|ZP_06178498.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269831056|gb|EEZ85224.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 365

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       V S  +G+
Sbjct: 118 TPKRIWIWLFFVNIYPFIIAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 ALAL-----GRRSDMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFLA 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K   L++LPQ
Sbjct: 223 QGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 36/76 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ +  IG  +  GR S   ++  IC VY+EV+R +P + V+F   
Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRRSDMPIIRSICTVYIEVWRGVPLITVLFMAS 214

Query: 150 KSVLSVLPIPDHSIVL 165
             +   L     +  L
Sbjct: 215 VMLPLFLAQGSETDKL 230


>gi|90410650|ref|ZP_01218666.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium profundum 3TCK]
 gi|90328891|gb|EAS45175.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium profundum 3TCK]
          Length = 365

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 122/266 (45%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  LV+     +  + +  +  +     F ++    GL      +     + +   ++GI
Sbjct: 110 ISLLVIEKTPGRKWIWLFFVNVYPFFAAFLLYGGVFGLEVVDTHLWGGLLVTLVIAIVGI 169

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V+SL    A  L R       +++  +YI  +    L T++ +A         P+     
Sbjct: 170 VVSLPIGVALALGRRSEMPIIRSICTVYIEIWRGVPLITVLFMA-----SVLLPL----- 219

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+       +     I +  ++AA++AE++R GL A+PRGQ EAA ALGL++ K+  L++
Sbjct: 220 FLTSEMEMDKLFRALIGVVLFSAAYMAEVIRGGLQAIPRGQYEAADALGLSYWKSMYLIV 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G    +     G A E  +    
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANSDPDWLGFATESYIFVAL 339

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  K+    K+
Sbjct: 340 VFWVFCFSMSRYSIFLENKLHTGHKR 365



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 81/200 (40%), Gaps = 7/200 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +A  G++ +  IG  +  GR S   ++  IC VY+E++R +P L+ + F+
Sbjct: 154 LWGGLLVTLVIAIVGIVVSLPIGVALALGRRSEMPIIRSICTVYIEIWRGVP-LITVLFM 212

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLF 203
              +L +    +  +   F   +     S   +       +             + LS +
Sbjct: 213 ASVLLPLFLTSEMEMDKLFRALIGVVLFSAAYMAEVIRGGLQAIPRGQYEAADALGLSYW 272

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
            +       +     +P +  +   +F   +LVLI   +  L   +      +++G +T 
Sbjct: 273 KSMYLIVLPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANSDPDWLGFATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
           S  F++L   + C++ +  +
Sbjct: 333 SYIFVALVFWVFCFSMSRYS 352


>gi|290961427|ref|YP_003492609.1| binding-protein-dependent transporter subunit [Streptomyces scabiei
           87.22]
 gi|260650953|emb|CBG74071.1| putative binding-protein-dependent transport system subunit
           [Streptomyces scabiei 87.22]
          Length = 277

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 20/246 (8%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +  + L        +   MF +   L+     + T    FVF  VLG+V++L      R
Sbjct: 42  SADWARLKNQFAQWDIAEQMFPDVITLALKNTVLYT-LSGFVFGLVLGMVIALM-----R 95

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                  +    +YI  F       L+ I +   +    P         G       +  
Sbjct: 96  LSSVGPYRWFAGVYIEIFRGLPA-LLIFIFIGVAVPLAFPGTQIPGGTYGKVALALGLVA 154

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
                     ++AE +R+G+ AVP+GQ+EAA +LG +  +A   +++PQA R I+PPLT+
Sbjct: 155 AA--------YMAETIRAGIQAVPKGQLEAARSLGFSPARAMVSIIVPQAFRIILPPLTN 206

Query: 330 QYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + + L K+SSL + +G      +L   G  + + T  +  I L+    YL ++I +   +
Sbjct: 207 ELVLLFKDSSLVLFLGVTLEERELSKYGRDLASTTANSTPI-LVAGLCYLLVTIPLGFVV 265

Query: 386 NRLNAK 391
            R+ AK
Sbjct: 266 RRMEAK 271



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 8/125 (6%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ A ++I + + P          I +   NT     SG +   ++G ++   RLS+   
Sbjct: 50  NQFAQWDIAEQMFP--------DVITLALKNTVLYTLSGFVFGLVLGMVIALMRLSSVGP 101

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
             W   VY+E+FR +P L++  F+  +V    P           + L    ++   +   
Sbjct: 102 YRWFAGVYIEIFRGLPALLIFIFIGVAVPLAFPGTQIPGGTYGKVALALGLVAAAYMAET 161

Query: 185 TNAKI 189
             A I
Sbjct: 162 IRAGI 166


>gi|167755200|ref|ZP_02427327.1| hypothetical protein CLORAM_00705 [Clostridium ramosum DSM 1402]
 gi|167705250|gb|EDS19829.1| hypothetical protein CLORAM_00705 [Clostridium ramosum DSM 1402]
          Length = 234

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 9/232 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F    +               KI +   ++G +  L    L       T      +   
Sbjct: 1   MFDFDKSFTIFLDNFDLFWYGTKITIILALVGTIAGLIIGLLFGAIRATTID----IKDK 56

Query: 226 TFLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIGG----STVSPEFMSLYIALSCYTAAF 280
             ++     L +I+  Y   F   P+L Q  F               +  + +S  T A+
Sbjct: 57  KIIVLIKKALKIISEIYIWFFRGTPMLVQAMFFYHGLRPFFQWNALTAGIMIISINTGAY 116

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ +V RGQ E A++LG+T  +  + ++LPQA+R+  P + +Q++  +K+SS+
Sbjct: 117 MAEIVRSGIQSVDRGQSEGALSLGMTRVQTMKYIILPQAIRNSFPAIGNQFIINIKDSSM 176

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +G  +L     +I   T       LI   +YL L+ +  + +N +  +I
Sbjct: 177 LNVIGVVELFFQSSSIAGSTMSYSATFLITCLVYLCLTSIATILLNIIEKRI 228


>gi|134294749|ref|YP_001118484.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134137906|gb|ABO53649.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Burkholderia vietnamiensis
           G4]
          Length = 225

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        +           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGAIPTLWTGAIVTFKITLIAIVIGIVWGTLL-ALMRLSGVKPLAWFAKGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       + ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR 225



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAIVTFKITLIAIVIGIVWGTLLALMRLSGVKPLAWFAKGYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  +
Sbjct: 76  FLIVPQL 82


>gi|118590774|ref|ZP_01548175.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Stappia aggregata IAM 12614]
 gi|118436750|gb|EAV43390.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Stappia aggregata IAM 12614]
          Length = 268

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 103/196 (52%), Gaps = 8/196 (4%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-HFDKPVLGQFNFIGGST 261
              R +  F+ +  + +P++ +  ++ F    L + A+   L      +L   +F     
Sbjct: 80  IVLRQTARFYVEIVRGMPIIVLLLYIAFVATPLFIAAVNAVLEPLGLDLLRTRDF----- 134

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P      +AL+   +AFIAE+ R+G+ AV +GQ+EAA ALG+      RL++ PQA++
Sbjct: 135 --PLLWRAVLALTIGYSAFIAEVFRAGIQAVDKGQIEAAEALGMNGWLRFRLIIFPQALK 192

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +I+PPL + ++ L+K+SSL   +G AD+  +G      + +  E   +   IYL ++I +
Sbjct: 193 TILPPLGNDFVALIKDSSLVSVLGVADITQLGKVYAAGSFRYFETYNVVALIYLMMTITL 252

Query: 382 ALFMNRLNAKIALKEK 397
           +L + +      ++E+
Sbjct: 253 SLALRKFERTKQIQER 268


>gi|261820775|ref|YP_003258881.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261604788|gb|ACX87274.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 238

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 98/230 (42%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   L+   +T+       V   ++ + L++      R F          
Sbjct: 6   QQYWQPLLWSDGYRLTGLAMTLWLLISSVVIGGLMALPLAIARVSPRRRFSFPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++ T++  G P  V + + Y   +   ++   + +  +          +AL+  T+A+ 
Sbjct: 60  -WLFTYVFRGTPLYVQLLVFYSGVYSLEIVRGTDLL-NAFFRSGLNCAILALALNTSAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA
Sbjct: 118 TEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCIILPSALRIALPAYSNEVILMLHSTALA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   D++ +   I   T Q      I   IYL++S ++     R   +
Sbjct: 178 FTVTVPDILKIARDINAATYQPFYAFGIAAVIYLAISFVLIGLFRRAERR 227


>gi|238894936|ref|YP_002919670.1| amino acid ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238547252|dbj|BAH63603.1| amino acid ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 308

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SV   P     +    F +   L     T+       V S + G +L+L     S     
Sbjct: 34  SVAFHPRWEWGVFARWFFDPVILEGLGQTLLLTLLGTVLSVIFGGLLALARLSSSWLLSS 93

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--------E 265
                +       +L   LP +V++ + Y   +    L       G T +         +
Sbjct: 94  LAWGYI-------WLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQ 146

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+P
Sbjct: 147 FSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILP 206

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++ ++L K +++   +   +L      I N+T + I ++++    YL+++ +++   
Sbjct: 207 SGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAIQ 266

Query: 386 NRLNAKIALKEKK 398
             +   +A  E++
Sbjct: 267 YLVERGLARSERR 279


>gi|190894720|ref|YP_001985013.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700381|gb|ACE94463.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 281

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 122/282 (43%), Gaps = 15/282 (5%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           GR +   ++A +  + V +       V I  ++  +L +      +  L           
Sbjct: 15  GRFAIAFVIALLLVLNVVLIGFASLRVQIAIVWLELLGLFLAFFATFHLSLPFIAEKLPF 74

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 + T   +   S V+   +++    +++        A+   Y S F       L 
Sbjct: 75  MITQGLVTT-IYVSAVSIVIASAIAILG-AVAKLSTNGFAYAIASFYTSFFR-----GLP 127

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y ++   P L          V     +  +ALS    A++ EI RSG+ ++ RGQ
Sbjct: 128 LLMQVYLIYLGLPQL--------GFVIDAVPAGILALSLCYGAYMTEIFRSGIQSIDRGQ 179

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA+ ++G       R ++LPQA+  IIPP  +Q++++LK+SSL   +G  +L+ +  T+
Sbjct: 180 WEASRSIGFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTL 239

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +T Q +E+++    +Y  +SI + L   R+    A  + +
Sbjct: 240 GQKTFQHMEMLISAAMLYWIMSIGLELIQARIERHYARSKVR 281



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G V T +++   ++ A+ I  L    +LS N     I   Y   FR +P L+ ++ +
Sbjct: 76  ITQGLVTTIYVSAVSIVIASAIAILGAVAKLSTNGFAYAIASFYTSFFRGLPLLMQVYLI 135

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +  +  + D        + L               + 
Sbjct: 136 YLGLPQLGFVIDAVPAGILALSLCYGAYMTEIFRSGIQSI 175


>gi|55378502|ref|YP_136352.1| amino acid ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
 gi|55231227|gb|AAV46646.1| amino acid ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
          Length = 326

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 6/234 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT---RLSRHFHEKTGKALPL 221
              G F            + T     +   +LGI L  F      ++R +     ++L L
Sbjct: 87  WVAGFFEFLAASIPYLPPLATGVWATILLTLLGIALGFFIAVPLSVARVYGGTLTRSLAL 146

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAF 280
            Y   F   G P L  + + Y       ++ +   +G G   +  F    IA +  +AA+
Sbjct: 147 GYTELF--RGTPLLAQLFVLYFATPLTTIIRELPTVGAGFIPAQAFWVAVIAFTLNSAAY 204

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +E +RS L +VP GQ+ AA ++GL+     R V+LPQ +R  IP  +++ + L+K SSL
Sbjct: 205 QSEYIRSALNSVPEGQLTAARSIGLSKVDGIRHVVLPQGLRYAIPGWSNELVYLIKYSSL 264

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +   +L      I ++T +  E+ ++   +YL+L I  +L M  +  ++A+
Sbjct: 265 ASFITVRELFERTDAIASETYRYTELFVLAGLLYLALVISASLVMEYVEDRVAI 318



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 6/88 (6%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           FE     +PY         +  G   T  L   G+     I   +   R+    L   + 
Sbjct: 92  FEFLAASIPYLPP------LATGVWATILLTLLGIALGFFIAVPLSVARVYGGTLTRSLA 145

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             Y E+FR  P L  +F LY +      
Sbjct: 146 LGYTELFRGTPLLAQLFVLYFATPLTTI 173


>gi|330897282|gb|EGH28701.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330939545|gb|EGH42868.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330981783|gb|EGH79886.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 229

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVVRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  M+    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LMAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|306832866|ref|ZP_07466000.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304425005|gb|EFM28137.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 267

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 2/184 (1%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLY 270
            +T    P+  +    + G P LV + L Y     F K +  ++ F       P  +   
Sbjct: 69  NRTKVLYPIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLKIRYGFDWNINAIPASVFAV 128

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
            A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A     P L + 
Sbjct: 129 TAFAFNEAAYTSETIRAAIQAVNIGEIEAARSLGMTSFQVYRRVIIPNAAVIATPTLINS 188

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K +SLA   G  ++ +    +     +  E  +    +Y  +SI+I      +  
Sbjct: 189 LIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWVISIIIEQIGRLIEK 248

Query: 391 KIAL 394
           ++ +
Sbjct: 249 RMDI 252


>gi|49081808|gb|AAT50304.1| PA2924 [synthetic construct]
          Length = 230

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 2/209 (0%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                +LG VL       ++    +  +AL   Y  T LI  +P LV++ L +       
Sbjct: 20  LALGSLLGAVLIGLLGASAKLAANRPLRALASGY--TTLIRSVPDLVIMLLLFFSLQILL 77

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                    G      F +  + L+    A+  E  R    AVP GQ+EAA A G+   +
Sbjct: 78  NRVTDALGIGQVDIDPFAAGCVTLAFIYGAYFTETFRGAFQAVPAGQVEAAQAYGMGRWR 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R VLLPQ +R  +P + + +  L+K+++L   +G  DLV         T Q     L+
Sbjct: 138 VFRRVLLPQMLRYALPGIGNNWQVLVKSTALVSIIGLGDLVKATQDAGKGTLQFFHFTLV 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IYL+++ +    +  L  + +L  ++
Sbjct: 198 CGLIYLAITAISNAALLWLERRSSLGVRR 226



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   IL G + T  LA   ++ A +IG L  + +L+AN+ +  +   Y  + R++P L
Sbjct: 4   DGFGPQILAGTLVTLKLALGSLLGAVLIGLLGASAKLAANRPLRALASGYTTLIRSVPDL 63

Query: 143 VVIFFLYKSV 152
           V++  L+ S+
Sbjct: 64  VIMLLLFFSL 73


>gi|28869962|ref|NP_792581.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853207|gb|AAO56276.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 220

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R  S     +    ++ + S  +G V+ L     +     +  + +  +
Sbjct: 1   MNYQLNFDAVWRDFSNLLAGLGLGLELALISIAIGCVIGLM-NAFALLSRYRALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFVVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|327534749|gb|AEA93583.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
          Length = 237

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 18/248 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +      S L   P   +     F  +           T+  +    + +F LGI     
Sbjct: 1   MFLLANISWLEEGPFALYRWEALFQDW--RIFGQAFLYTILLSLGAILVAFTLGIFFGSL 58

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           +   S+  H     A+  +Y+  F     P L+   + Y   +  P+L        +T+ 
Sbjct: 59  SATKSKLLH-----AISRVYVEFF--QNTPLLIQFIVVY---YGFPLLNPLLSFSITTI- 107

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  + +  Y  A+I+E+VRSG+ AVPRGQ EAA + GLT+ +  R V+LPQA R +
Sbjct: 108 -----AILCVGLYHGAYISEVVRSGIGAVPRGQFEAAYSQGLTYGQTMRYVILPQAWRIM 162

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +  AD++    +  +     I    +  F+Y  L   +A 
Sbjct: 163 LPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSVNLNYIPAFALAGFLYFILCFPLAN 222

Query: 384 FMNRLNAK 391
              ++  K
Sbjct: 223 LARKMEEK 230



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                  F+ T  L+   ++ A  +G   G+   + +KL+  I RVYVE F+N P L+  
Sbjct: 27  WRIFGQAFLYTILLSLGAILVAFTLGIFFGSLSATKSKLLHAISRVYVEFFQNTPLLIQF 86

Query: 146 FFLYKSVLSVLP 157
             +Y     + P
Sbjct: 87  IVVYYGFPLLNP 98


>gi|302188402|ref|ZP_07265075.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 365

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + +V  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFPRKAVYGIAFLVIYPVVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|163843977|ref|YP_001628381.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163674700|gb|ABY38811.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 240

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 14/226 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +     +           I + +   G ++S+    L    H +  + +   YI
Sbjct: 1   MNFDFSVIFDNWTLFARGTWLTIVIAIVAIATGFLISI-PIALMALSHRRPLRWISSAYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       +VL    Y+L F                 PE +   IAL+ + +++ AEI
Sbjct: 60  EWFRNI-PFIVVLYLFFYRLPF------------MGVRLPESIVGTIALAFFASSYFAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S+   +
Sbjct: 107 IRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             A+L   G  I  +T    EI L    IY  ++ + A  M+R   
Sbjct: 167 TVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHRTEK 212



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T    G   T  +A   +    +I   +    LS  + + WI   Y+E FRNIP +VV+
Sbjct: 12  WTLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPLRWISSAYIEWFRNIPFIVVL 71

Query: 146 FFLYK 150
           +  + 
Sbjct: 72  YLFFY 76


>gi|169668088|gb|ACA64430.1| amino acid ABC tansporter permease protein [Campylobacter fetus
           subsp. venerealis NCTC 10354]
          Length = 240

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
              +  T   +      +GIVL      L +  + K    +   YI   ++ G P L+ +
Sbjct: 40  YVDSYFTTLGLTFGGIFIGIVLGFILAFL-KFLNIKILSFIIDEYID--IVRGTPVLLQL 96

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +             F F+  +T+S  F +  IAL   ++A++AEIVRSG+ +V +GQME
Sbjct: 97  MI-------------FAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQME 143

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A+GL++  + R ++ PQA+++I+P L +++++L K +S+   +G  DL     ++  
Sbjct: 144 AARAMGLSYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDLTMQSKSLQA 203

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 E IL    IY +     +L    L  ++
Sbjct: 204 TLFSP-EPILFAGVIYYANVKFFSLLAKLLENRL 236



 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 42/93 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
            P +   +   A +  +  T  L F G+    ++G ++   +    K++++I   Y+++ 
Sbjct: 28  YPVSITDAQKGAYVDSYFTTLGLTFGGIFIGIVLGFILAFLKFLNIKILSFIIDEYIDIV 87

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           R  P L+ +      +L+ L    ++ V+  G+
Sbjct: 88  RGTPVLLQLMIFAFVILATLSDNFYAAVIALGL 120


>gi|158424241|ref|YP_001525533.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331130|dbj|BAF88615.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 219

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +  LG +  LF   L+R       +     YI   +I G P L+++ L Y  
Sbjct: 20  WTLVLTAIALTLGGIAGLFI-ALARVSPLMPLRLATAAYIQ--IIQGSPVLMILFLSYY- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     + IG     P  ++  I++S Y + ++ +I R  + AVP+ Q EA+  LG
Sbjct: 76  --------GLSLIG--FQLPALVAASISMSIYVSGYLGDIWRGCIEAVPKPQWEASECLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++LPQA+R  +PP T   + ++KN+S+   +GF +L   G  I N T Q  
Sbjct: 126 MTRVQQFRHIILPQALRIALPPTTGFAVQVVKNTSITSIIGFVELSRAGQLINNSTFQPF 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + L    IY  +   ++     L  K+ + 
Sbjct: 186 RVFLTVAAIYFVICYPLSRLSGWLERKLNVG 216



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 31/99 (31%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L    +    I G  +   R+S    +      Y+++ +  P L+++F  
Sbjct: 14  LLESLRWTLVLTAIALTLGGIAGLFIALARVSPLMPLRLATAAYIQIIQGSPVLMILFLS 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +       +     M +   G           A
Sbjct: 74  YYGLSLIGFQLPALVAASISMSIYVSGYLGDIWRGCIEA 112


>gi|170722937|ref|YP_001750625.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169760940|gb|ACA74256.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 229

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 4/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  +Y  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDMY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              D    LG              ++    L     A+++E  R   + +P+GQ EA  A
Sbjct: 71  GGQDIINRLGPLVGYDDYIDLNPLVAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEAGAA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G+++R+    + +PQ +R  IP  T+ +L L K ++L   VG  D++       + T +
Sbjct: 131 YGMSNRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATRE 190

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                L    +YL L+ +  L +  L  + ++  K
Sbjct: 191 PFTFFLAVAALYLVLTSVSLLALKYLEKRYSVGVK 225



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDMYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     ++      +     + LN 
Sbjct: 65  ILLIFYGGQDIINRLGPLVGYDDYIDLNP 93


>gi|34496308|ref|NP_900523.1| histidine transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34102161|gb|AAQ58528.1| histidine transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 229

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 9/234 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F             +T++ +    + +F +G+V +      ++  H      +  LY  
Sbjct: 1   MFLDGFGPIIWQGTLVTLELSVLSLLLAFAIGLVGA-----GAKLSHNPLLGGVSTLY-- 53

Query: 226 TFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T L+ G+P LVL+ L +  L      + +   I    + P F+S  + L     A+  E 
Sbjct: 54  TTLVRGVPDLVLMLLIFYSLQIGMNKITEALRIEQIDLDP-FVSGIVTLGFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R   ++VP+GQ+EA IA G+T  +    V  PQ MR  +P +++ +  +LK ++L   +
Sbjct: 113 LRGAFLSVPKGQIEAGIAYGMTSWQVFHRVQFPQMMRFALPGISNNWQVMLKATALVSII 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G AD+V         T +     L+   IYL+L+ +    + +L  + +   ++
Sbjct: 173 GLADVVKASVDAGKSTYKVFFFTLVAGAIYLALTTLSNFVLAKLERRYSTGVRE 226



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 34/70 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   I  G + T  L+   ++ A  IG +    +LS N L+  +  +Y  + R +P L
Sbjct: 4   DGFGPIIWQGTLVTLELSVLSLLLAFAIGLVGAGAKLSHNPLLGGVSTLYTTLVRGVPDL 63

Query: 143 VVIFFLYKSV 152
           V++  ++ S+
Sbjct: 64  VLMLLIFYSL 73


>gi|183601788|ref|ZP_02963158.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683682|ref|YP_002470065.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190714|ref|YP_002968108.1| glutamate ABC transporter permease [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196120|ref|YP_002969675.1| glutamate ABC transporter permease [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183219394|gb|EDT90035.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219621332|gb|ACL29489.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240249106|gb|ACS46046.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250674|gb|ACS47613.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|289178452|gb|ADC85698.1| GluD [Bifidobacterium animalis subsp. lactis BB-12]
 gi|295793703|gb|ADG33238.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 363

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 101/231 (43%), Gaps = 18/231 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G   ++  L     T+       + S V G+V  +      R    +  + +  
Sbjct: 59  WKPALDGEAWSDFYLPGLWATLRAAFLAVIGSVVFGLVFGI-----GRLLPSRIVQGICA 113

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + I       +  +++   +     D P             SP + ++ I+L  Y  + +
Sbjct: 114 IVIEFCRAVPVLIMMIFFWRAFAFLDLP-------------SPSYWAVVISLVFYNGSVV 160

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++RSG+  +P GQ EAA+ALG+T  ++   + +PQA+ +++P   +Q + +LK+++L 
Sbjct: 161 AELIRSGVGNLPGGQHEAAVALGMTRTQSLMSIEVPQAIYAMLPAAVTQLVVVLKDTALG 220

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + + DL+     + +     ++ +++   IY  +  +++     L  ++
Sbjct: 221 SIIMYTDLLQESRRLGSMYFNILQTLVVAAVIYFIICWLLSRLAEWLPVRM 271



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     +++   L G   T   AF  +I + + G + G GRL  +++V  IC + +
Sbjct: 57  ELWKPALDGEAWSDFYLPGLWATLRAAFLAVIGSVVFGLVFGIGRLLPSRIVQGICAIVI 116

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F +++     LP P +  V+   +F N
Sbjct: 117 EFCRAVPVLIMMIFFWRAFAFLDLPSPSYWAVVISLVFYN 156


>gi|119897621|ref|YP_932834.1| putative amino acid permease [Azoarcus sp. BH72]
 gi|119670034|emb|CAL93947.1| putative amino acid permease [Azoarcus sp. BH72]
          Length = 339

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 90/298 (30%), Positives = 145/298 (48%), Gaps = 25/298 (8%)

Query: 120 SANKLVAWICRVYVE---VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           S   L+A     ++    +      L+     + S       P  S +  FG+ L N   
Sbjct: 40  SGLWLLAATAAGHMRERGIHSGFDFLLQSAGFWISEGVPAFDPAESYLKAFGVGLANTLR 99

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                T+   A  F+    LG +      R     + +T + +PLL       F L  ++
Sbjct: 100 VALPATLAALAIGFLVG--LGRIAHNPLLRACCTAYVETLRNIPLLLQLLAWYFVLTAVL 157

Query: 237 L------------------IALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
                              +AL +      + P  G F+  GG+ +SPE+++L+I L+ Y
Sbjct: 158 PPAAQAIELLPHVYLGKSGLALPWPGADGIELPERGGFSISGGAQLSPEYLALFIGLATY 217

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           TA++IAE VR+G+ AV  GQ +AA+ALGL   +  R + LPQA+ +I+PPL +  LN++K
Sbjct: 218 TASYIAESVRAGVQAVSAGQAQAAVALGLRRGQILRHITLPQALPAIVPPLANHALNVIK 277

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           NSSLAVA+G+ DLVS+  T +NQTG+A+E I I + +Y+ +  +     + L  +   
Sbjct: 278 NSSLAVAIGYPDLVSIANTTLNQTGRAVECIAIVVAVYVLICALGIGLAHLLEHRWRR 335



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 73/158 (46%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              + +Q+ L  L+             +M +  +  G  FL + AGF I +G+  +    
Sbjct: 25  RRGLLLQLGLLALIASGLWLLAATAAGHMRERGIHSGFDFLLQSAGFWISEGVPAFDPAE 84

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY  A  VG  NT  +A    + A  IG LVG GR++ N L+   C  YVE  RNIP L+
Sbjct: 85  SYLKAFGVGLANTLRVALPATLAALAIGFLVGLGRIAHNPLLRACCTAYVETLRNIPLLL 144

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            +   Y  + +VLP    +I L   ++L   GL+ P  
Sbjct: 145 QLLAWYFVLTAVLPPAAQAIELLPHVYLGKSGLALPWP 182


>gi|317012748|gb|ADU83356.1| amino acid ABC transporter permease [Helicobacter pylori
           Lithuania75]
          Length = 240

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+   ++ I+++L      +HF  K   A    Y+S  +I G P LV I + + 
Sbjct: 44  PLAIISFILGLLIAIMVALIKIVPPKHFMHKALLAGVNFYVS--IIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|293604534|ref|ZP_06686939.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292817115|gb|EFF76191.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 217

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 18/220 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+         S VLG+V +L     +    + +G  + LL            +
Sbjct: 16  LQGAKLTILVTLGSLALSTVLGLVWALMRVSGNTFLSKFSGGVINLL----------RGI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I L + ++F  P +                +  I L    +A+ AE  R+G+ A+ RG
Sbjct: 66  PIIVLLFYIYFVMPDM--------GVSFTAVQAAIIGLGVAYSAYQAENFRAGIQAIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA+A+G++     R V+LPQA++ ++PP  +  + +LK+SS A  +  A+L   G  
Sbjct: 118 QIEAAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I   T +   +  +   +YL + + + L +  L  + A K
Sbjct: 178 IAVSTFKNATVFSLVALMYLVMCVPLILLVRHLEKRSAAK 217



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 40/110 (36%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   + Y   +L G   T  +    +  +T++G +    R+S N  ++      + + R 
Sbjct: 5   FKDAAEYLPILLQGAKLTILVTLGSLALSTVLGLVWALMRVSGNTFLSKFSGGVINLLRG 64

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           IP +V++F++Y  +  +            G+ +               A 
Sbjct: 65  IPIIVLLFYIYFVMPDMGVSFTAVQAAIIGLGVAYSAYQAENFRAGIQAI 114


>gi|27365996|ref|NP_761524.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|27362196|gb|AAO11051.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus
           CMCP6]
          Length = 365

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 122/274 (44%), Gaps = 16/274 (5%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            Y+ +      L       +  + +  +  +  ++   ++    GL            + 
Sbjct: 102 FYITLAIFTLLLAYEKTPKRMWIWLFFVNIYPFIVAALLYGGVFGLEVVETHKWGGLLVT 161

Query: 191 VFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +   ++GIV+SL    A  L R       ++L  +YI  +    L T++ +A        
Sbjct: 162 LIIALVGIVVSLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMA-------- 213

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +    F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+
Sbjct: 214 --SVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTY 271

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAI 364
            K   L++LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A 
Sbjct: 272 WKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFAT 331

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +    ++      ++ +   L  K+    K+
Sbjct: 332 ESYVFVALVFWVFCFGMSRYSIWLENKLHTGHKR 365


>gi|206576834|ref|YP_002237018.1| amino acid ABC transporter, permease protein/ATP-binding protein
           [Klebsiella pneumoniae 342]
 gi|290510951|ref|ZP_06550320.1| amino acid ABC transporter, permease/ATP-binding protein
           [Klebsiella sp. 1_1_55]
 gi|206565892|gb|ACI07668.1| amino acid ABC transporter, permease protein/ATP-binding protein
           [Klebsiella pneumoniae 342]
 gi|289775944|gb|EFD83943.1| amino acid ABC transporter, permease/ATP-binding protein
           [Klebsiella sp. 1_1_55]
          Length = 506

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +G F +   +        T   +   S+ +G+V+       ++    +  K    L
Sbjct: 1   MAFDWGYFFSLFSIGAFWQACVTVIVVSTLSWGIGLVVGFLL-ACAKLSAPRWVKIPVEL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F    +P +VL+   Y L    PV      +        F++  ++++   AA++A
Sbjct: 60  YIWFF--RSVPLMVLLVFVYNLPQLFPVTQPLLGV-------PFIAGLVSMTVTEAAYMA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL++V +GQ EA  AL  +     RL+++PQA R  +P L ++Y+ ++K SS+  
Sbjct: 111 EIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V   +L+  G  +  Q    +E +L     Y+ +  +       L  ++ ++ K+
Sbjct: 171 VVSLPELLLTGQRLYAQNFLVMETLLAVAVYYVMVVTVFTWLFRALENRLDIQRKR 226



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A     V    ++        ++G L+   +LSA + V     +Y+  FR++P +V++ F
Sbjct: 16  AFWQACVTVIVVSTLSWGIGLVVGFLLACAKLSAPRWVKIPVELYIWFFRSVPLMVLLVF 75

Query: 148 LYK 150
           +Y 
Sbjct: 76  VYN 78


>gi|229916002|ref|YP_002884648.1| polar amino acid ABC transporter inner membrane subunit
           [Exiguobacterium sp. AT1b]
 gi|229467431|gb|ACQ69203.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sp. AT1b]
          Length = 232

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 8/175 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L Y STF I  +  + ++ + + L+   P +                +  +  S  +AA+
Sbjct: 60  LRYPSTFYISFMRGVPILIILFILYSGFPFI--------GIEFAALTAAILGFSLNSAAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAEI+RS + AV  GQ+EAA +LG+      + V+LPQA R  +PPL++ +L+L+K SSL
Sbjct: 112 IAEIIRSSIRAVDDGQVEAARSLGMGKWLTLKGVVLPQATRIALPPLSNVFLDLIKASSL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A  +   ++ +    +  +    + + ++   IY ++   ++ F   L       
Sbjct: 172 AAMITVPEIFNKAKIVGGREFDYMTVYIVVALIYWAICTFMSFFQEWLERHFERY 226



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 42/100 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G  NT W++F  M    ++G L+  G+LS  +L+ +    Y+   R +P L+++F 
Sbjct: 23  YLLGGLPNTLWISFVSMFFGLLLGLLLALGKLSPTRLLRYPSTFYISFMRGVPILIILFI 82

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           LY     +            G  LN+       +     A
Sbjct: 83  LYSGFPFIGIEFAALTAAILGFSLNSAAYIAEIIRSSIRA 122


>gi|51244880|ref|YP_064764.1| glutamine ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50875917|emb|CAG35757.1| probable glutamine ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 221

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 14/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   +      + T+  + V S + G++  +    L R F     + L  +Y S F  
Sbjct: 4   FYSQELIPALNRGLITSVMLIVPSAIFGLLGGVVIGTL-RVFGNAPVRRLFNIYASVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P +V + + Y                       + +  I     ++A+ +E +R  L
Sbjct: 61  RGVPLMVQLFILYY-----------GLPNIGIYLDAYGAAVIGFILCSSAYNSEYIRGAL 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+  GQ++A  ALG++  +    +++PQA R  +P   ++ + L+K SSLA  V   +L
Sbjct: 110 QAIKSGQLKAGAALGMSKVQTIVWIVIPQAFRKALPGCGNEVIYLIKYSSLAYIVSCIEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 I +QT +  E   +    YL L  + +  + R+  ++ +
Sbjct: 170 TGEARAIASQTFRFTEAFTVVACYYLILVTIASYILKRVEKRLEI 214



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 40/101 (39%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G + +  L     I   + G ++G  R+  N  V  +  +Y  VFR +P +V +F 
Sbjct: 12  ALNRGLITSVMLIVPSAIFGLLGGVVIGTLRVFGNAPVRRLFNIYASVFRGVPLMVQLFI 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           LY  + ++    D       G  L +   +   +     A 
Sbjct: 72  LYYGLPNIGIYLDAYGAAVIGFILCSSAYNSEYIRGALQAI 112


>gi|83950534|ref|ZP_00959267.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83838433|gb|EAP77729.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 238

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 3/229 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                +G+    + LS+    +     + + ++VL +++ +    + R    +    L  
Sbjct: 2   DYNWNWGVLFEEQYLSWLISGVGWTFSVALSAWVLALLVGVLIG-VGRTLPNRPIAFLCT 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F    +P LV + L Y +  +        ++     +PEF++  I L  YTA+ +
Sbjct: 61  TYVEIF--RNVPLLVQLFLWYFVVPEIVPQDMGRWMKRDMPNPEFVTAVIGLGLYTASRV 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VR+G+ AV +G + A+ A G +  +  R VLLP + R I+PP+TS++L + KNSSLA
Sbjct: 119 AEQVRAGINAVGKGLVAASYANGFSTAQTYRYVLLPISFRLIVPPMTSEFLTIFKNSSLA 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +G  +L +    I   T Q  E       IY+ +++M  +    L  
Sbjct: 179 LTIGLLELTAQSQQIAEYTFQGFEAYTAATIIYVVIALMATVIAQMLEK 227



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 46/77 (59%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y + ++ G   TF +A S  + A ++G L+G GR   N+ +A++C  YVE+FRN+P 
Sbjct: 12  EEQYLSWLISGVGWTFSVALSAWVLALLVGVLIGVGRTLPNRPIAFLCTTYVEIFRNVPL 71

Query: 142 LVVIFFLYKSVLSVLPI 158
           LV +F  Y  V  ++P 
Sbjct: 72  LVQLFLWYFVVPEIVPQ 88


>gi|25010744|ref|NP_735139.1| hypothetical protein gbs0689 [Streptococcus agalactiae NEM316]
 gi|77410798|ref|ZP_00787156.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|23095098|emb|CAD46333.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77163177|gb|EAO74130.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
          Length = 231

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 10/179 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K GK +  +Y+  F     P LV +   Y         G      G  +   F +  
Sbjct: 55  SKSKVGKLISRIYVEVF--QNTPLLVQMVFVYY--------GLAIISNGHVMISAFFTAV 104

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  + ++LPQA+R+I+PP+T+Q
Sbjct: 105 LCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQFIILPQAVRTILPPMTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +NL+KN+S    +  AD++ V       T   I         Y  +   +A +  +  
Sbjct: 165 VVNLIKNTSTVAIISGADIMFVAKAWAYDTTNYIPAFAGAAIFYFVICFPLASWARKQE 223



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++      GF+ T  ++F  ++ A I+G L G    S +K+   I R+YVEVF+N P LV
Sbjct: 19  NHFDLFFKGFLYTLGISFGALLLALILGILSGGLSTSKSKVGKLISRIYVEVFQNTPLLV 78

Query: 144 VIFFLYKSV 152
            + F+Y  +
Sbjct: 79  QMVFVYYGL 87


>gi|322374750|ref|ZP_08049264.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|321280250|gb|EFX57289.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 225

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +    LS   H+   + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIIFGVLSTSKHQ-ILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + +   + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMISIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G + G    S ++++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIIFGVLSTSKHQILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMISIYW 94


>gi|317153799|ref|YP_004121847.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316944050|gb|ADU63101.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 255

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 23/255 (9%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L+     +    + T  +I   S +  ++L +      R    K  +   L 
Sbjct: 3   YNFNWKIMLSGEPAQWMWEGLVTTMQIATISLLCAMLLGIVICVF-RMTPFKLLQWFSLA 61

Query: 223 YISTFLIFGLPTLVLIALKYQ----------------LHFDKPVLGQFNFI----GGSTV 262
           Y   F     P LV I   Y                 L++  P                 
Sbjct: 62  YTEFF--RNTPLLVQIFFWYNASHFVLPEALNKWMNVLYYWFPGPFTLFGHEYAGQWMLF 119

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           + EFM+  IAL+ YT+AFIAE +R+G+ ++P+ Q+EA+ A+GL+  +A R V+LPQA+R 
Sbjct: 120 NVEFMTGVIALTVYTSAFIAEEIRAGIFSIPKTQIEASRAVGLSFTQAYRYVILPQALRI 179

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPPL SQ LNL+KNSSL + +G  +L+ +   + +  G   E     + IYL +S+ ++
Sbjct: 180 VIPPLISQSLNLIKNSSLCMVIGVTELMFMARQVESYHGAPFEAFSAALLIYLVISLFVS 239

Query: 383 LFMNRLNAKIALKEK 397
             +   N    ++ +
Sbjct: 240 FGITMYNKHFLIQVR 254



 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 1/115 (0%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A  +  G V T  +A   ++ A ++G ++   R++  KL+ W    Y E FRN P LV I
Sbjct: 16  AQWMWEGLVTTMQIATISLLCAMLLGIVICVFRMTPFKLLQWFSLAYTEFFRNTPLLVQI 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           FF Y +   VLP   +   +    +      +           +F   F+ G++ 
Sbjct: 76  FFWYNASHFVLPEALNKW-MNVLYYWFPGPFTLFGHEYAGQWMLFNVEFMTGVIA 129


>gi|262164524|ref|ZP_06032262.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262026904|gb|EEY45571.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 265

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 34  MGYQWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 89  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 254

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 255 EHKLGAQWR 263



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 11/128 (8%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
             +    +  +L+    +W +++    M       G  +   R    + + ++ +     
Sbjct: 7   RPLLFATLQMILVFAGLVWLLDSGAQAM-------GYQWQWHR----VPEYVLIFEDGEW 55

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV 
Sbjct: 56  WAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQ 115

Query: 145 IFFLYKSV 152
           I+ LY   
Sbjct: 116 IYLLYFVF 123


>gi|330811361|ref|YP_004355823.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379469|gb|AEA70819.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 223

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+   A   V   +LG +L+L      R  H K    L   Y++ F      ++
Sbjct: 16  WNGMVMTLKLMALGVVGGIILGTILALM-----RLSHNKLVSNLAGAYVNYFR-----SI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++P+G
Sbjct: 66  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFGSCIVAFMMFEAAYFCEIVRAGVQSIPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++    
Sbjct: 125 QMGAAQALGMNYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRA 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G++ E ++I   +Y ++S   +  + RL  + A+
Sbjct: 185 SGDIIGRSNEFLIIAGLVYFTVSFAASQLVKRLQKRFAV 223



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   I+GT++   RLS NKLV+ +   YV  FR+IP L+VI + 
Sbjct: 15  LWNGMVMTLKLMALGVVGGIILGTILALMRLSHNKLVSNLAGAYVNYFRSIPLLLVITWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 75  YLAVPFVLRWITGEDTPIGAFGSCIVAFMMFEAAYFCEI 113


>gi|260774979|ref|ZP_05883879.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260609069|gb|EEX35228.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 223

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLNLMPILLKYLGTTMEMATWGLVFSLILAVILANI-----RVFRVPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS F   G P LV + L   L++  P +  F           F +  I L+ + AA++A
Sbjct: 58  YISFF--RGTPLLVQLFL---LYYGLPQIFPF-----LVGLDAFSAAVIGLTLHFAAYMA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA 
Sbjct: 108 ESIRAAIIGIDRSQMEASLSVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 168 TLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLVFSLILAVILANIRVFRVPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPI 158
           Y  +  + P 
Sbjct: 75  YYGLPQIFPF 84


>gi|171320532|ref|ZP_02909558.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171094225|gb|EDT39306.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 219

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S  LG+V+ L    + R    +    L   Y+S  L+ G P
Sbjct: 9   HTLPVMVKGALLTLKFAVASMALGLVVGLVV-AIMRIGSNRLASGLAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y   +  P L       G T+ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVY---YGLPDL-------GITLDPT-TAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA +LGLTH +  R ++ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAAAHSLGLTHMQTLRHIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    +Y  LS ++     R+  +++L
Sbjct: 175 QEVIAATFQPLPLYLAAAALYWVLSTLLTRLQGRVETRLSL 215



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G + T   A + M    ++G +V   R+ +N+L + + + YV + R  P LV +F 
Sbjct: 13  VMVKGALLTLKFAVASMALGLVVGLVVAIMRIGSNRLASGLAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDLGITLDPTTAGIFTLTLN 97


>gi|145631225|ref|ZP_01786998.1| arginine ABC transporter permease protein [Haemophilus influenzae
           R3021]
 gi|144983152|gb|EDJ90647.1| arginine ABC transporter permease protein [Haemophilus influenzae
           R3021]
          Length = 221

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F    +A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVLA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|66046799|ref|YP_236640.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257506|gb|AAY38602.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330953616|gb|EGH53876.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
 gi|330972268|gb|EGH72334.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 229

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  M+    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LMAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|171740988|ref|ZP_02916795.1| hypothetical protein BIFDEN_00050 [Bifidobacterium dentium ATCC
           27678]
 gi|283455623|ref|YP_003360187.1| ABC transporter permease [Bifidobacterium dentium Bd1]
 gi|171276602|gb|EDT44263.1| hypothetical protein BIFDEN_00050 [Bifidobacterium dentium ATCC
           27678]
 gi|283102257|gb|ADB09363.1| Permease protein of ABC transporter system [Bifidobacterium dentium
           Bd1]
          Length = 220

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SFV+G+ L++ A  L R       + +   Y+  F   G P LV + + +  
Sbjct: 23  VTIPLTLISFVVGLALAI-AVALVRVAKVPVIQRIAQFYVWVF--RGTPLLVQLFVIF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F       V P F S  IA S    A+ +E +R  ++AVP+GQ+EA +   
Sbjct: 78  ---------FGLPSVGIVVPAFPSAIIAFSLNVGAYASETLRGAILAVPKGQIEAGLTTN 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L +    RL++LPQA +S  P L + +++L+K++SLA  +  A++      I+  T + +
Sbjct: 129 LNYLTIMRLIVLPQAFKSAFPALFNTFISLVKDTSLAANITVAEMFMAAQRIVATTYEPL 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +      IYL+   ++         ++A +
Sbjct: 189 VLYCEVGLIYLAFCTVLTWLQGICERQLAKR 219



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 35/90 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   ++ G   T  L     +    +   V   R++   ++  I + YV VFR  P L
Sbjct: 11  DSFDKLLIPGLTVTIPLTLISFVVGLALAIAVALVRVAKVPVIQRIAQFYVWVFRGTPLL 70

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + SV  +            LN
Sbjct: 71  VQLFVIFFGLPSVGIVVPAFPSAIIAFSLN 100


>gi|145224552|ref|YP_001135230.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145217038|gb|ABP46442.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium gilvum PYR-GCK]
          Length = 291

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 15/239 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +       G       L     T+   A   V + +LG VL +   RLS H   +   +
Sbjct: 48  AEKWEPFLTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGV--GRLSTHTPIRWVSS 105

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                +       +P L+++   Y L+    V          +       +   L+ Y  
Sbjct: 106 -----VLVEFFRAVPVLIMMIFAYFLYAFYDVFP--------SKYLALAGVITGLTLYNG 152

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A IAEIVR+G+ A+PRGQ EA+ ALGLT  +  R +LLPQA+ S++P L SQ + +LK++
Sbjct: 153 AVIAEIVRAGVHALPRGQAEASSALGLTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDT 212

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L   + F ++V  G  I +  G  I  +++   + ++L+  ++ F   L  ++    K
Sbjct: 213 ALGYQITFVEMVRQGTVIGSAYGNYIPALIVIAVLMIALNFSLSWFATWLEKRMRRSRK 271



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 15/212 (7%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +   P+ +   + T +L G   T   A   ++ A I+G ++G GRLS +  + W+  V 
Sbjct: 48  AEKWEPFLTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGVGRLSTHTPIRWVSSVL 107

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF---GMFLNNRGLSFPTLTMDTNAKI 189
           VE FR +P L+++ F Y         P   + L     G+ L N  +    +    +A  
Sbjct: 108 VEFFRAVPVLIMMIFAYFLYAFYDVFPSKYLALAGVITGLTLYNGAVIAEIVRAGVHALP 167

Query: 190 ---FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 S  LG  L+   T  S    +     LP+L     ++         AL YQ+ F
Sbjct: 168 RGQAEASSALG--LTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDT-----ALGYQITF 220

Query: 247 DKPVLGQ--FNFIGGSTVSPEFMSLYIALSCY 276
            + V          G+ +    +   + ++  
Sbjct: 221 VEMVRQGTVIGSAYGNYIPALIVIAVLMIALN 252


>gi|260655737|ref|ZP_05861206.1| L-cystine ABC transporter, permease protein [Jonquetella anthropi
           E3_33 E1]
 gi|260629353|gb|EEX47547.1| L-cystine ABC transporter, permease protein [Jonquetella anthropi
           E3_33 E1]
          Length = 226

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 10/229 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F                 T  ++   +   G+ L+ F   +              LYI
Sbjct: 1   MNFDFSFFLHLFPSIIKYGGTTIRLSALAIFCGLCLA-FLIAIVMDLRIPGLSQFFRLYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P +  +   Y               G       F +  I LS  +AA++AE 
Sbjct: 60  SFF--RGTPLMAQLFCFYFGILPA-------IRGAVKSVSSFQAALIILSLASAAYMAES 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ + +VP+GQ EAA ++G+T+ +A R ++LPQA+R  +P L S ++N++K++SL  A+
Sbjct: 111 LRAAIGSVPKGQFEAAQSIGMTYPQAMRRIILPQAVRVALPTLFSSFINIVKDTSLVFAI 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  ++++      +   + +E  L  + ++ +++ ++      L  ++A
Sbjct: 171 GVKEMMAQAQLEGSGNYRYLEAYLCVLLVFWAITAVMGRTQRALEGRLA 219


>gi|37679739|ref|NP_934348.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37198484|dbj|BAC94319.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 372

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 122/274 (44%), Gaps = 16/274 (5%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            Y+ +      L       +  + +  +  +  ++   ++    GL            + 
Sbjct: 109 FYITLAIFTVLLAYEKTPKRMWIWLFFVNIYPFIVAALLYGGVFGLEVVETHKWGGLLVT 168

Query: 191 VFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +   ++GIV+SL    A  L R       ++L  +YI  +    L T++ +A        
Sbjct: 169 LIIALVGIVVSLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMA-------- 220

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +    F+   + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+
Sbjct: 221 --SVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTY 278

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAI 364
            K   L++LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A 
Sbjct: 279 WKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFAT 338

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +    ++      ++ +   L  K+    K+
Sbjct: 339 ESYVFVALVFWVFCFGMSRYSIWLENKLHTGHKR 372


>gi|223933461|ref|ZP_03625445.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|223897834|gb|EEF64211.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
          Length = 220

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 9/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQ 243
                  F  +LG+V ++      R  +       P+  +    + G P LV + L  Y 
Sbjct: 1   MTLAGAFFGLILGLVFAIVKINRVRFLY-------PVQAVFVSFLRGTPILVQLMLTYYG 53

Query: 244 LHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +      L Q +         P  +    A +   AA+++E +R+ + AV  G++EAA +
Sbjct: 54  IPLVLRGLNQEYGLDWNINAIPAAVFAITAFAFNEAAYMSESIRAAIQAVSPGEIEAARS 113

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T  +  R +++P A     P L +  + L K +SLA + G  ++ +          +
Sbjct: 114 LGMTSGQVYRRIIIPNAAVIATPSLINTLIGLTKGTSLAFSAGIVEVYAQAQIQGGADYR 173

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             E  +    +Y +LS++I  F   L  K+A++
Sbjct: 174 YFERYISVSLVYWALSVLIESFGRFLENKMAIQ 206


>gi|163858765|ref|YP_001633063.1| amino acids ABC transporter, permease protein [Bordetella petrii
           DSM 12804]
 gi|163262493|emb|CAP44796.1| amino acids ABC transporter, permease protein [Bordetella petrii]
          Length = 234

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 4/189 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + +    L  LY++      +P LV I L Y       ++        + +  EF  
Sbjct: 48  RMLNLRALNWLIALYVAF--HRNVPMLVHILLWYFG--VAAIVPPALNDAINIIGGEFFY 103

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IA+   TAA+++E +RS + A+PRGQMEAA +LGL++ +A R V+LPQA +  IPPLT
Sbjct: 104 ATIAIGLVTAAYVSEDLRSAIRAIPRGQMEAARSLGLSYLQAMRKVILPQAFKISIPPLT 163

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q L L KN+SLA+A+G  +L   G TI + T +  E  L+   +YL++S+++ L    L
Sbjct: 164 NQTLLLFKNTSLAMAIGLIELTGAGRTIESATFKTFEAYLVVTVLYLAISLLLMLAGALL 223

Query: 389 NAKIALKEK 397
           + ++A   K
Sbjct: 224 SKRVAYVTK 232



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL G   T  +     + A  +G+L+   R+   + + W+  +YV   RN+P LV 
Sbjct: 15  YPTLILGGLATTLEMTLLAWLLAFALGSLLAVLRMLNLRALNWLIALYVAFHRNVPMLVH 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           I   Y  V +++P   +  +   G
Sbjct: 75  ILLWYFGVAAIVPPALNDAINIIG 98


>gi|156974645|ref|YP_001445552.1| hypothetical protein VIBHAR_02363 [Vibrio harveyi ATCC BAA-1116]
 gi|156526239|gb|ABU71325.1| hypothetical protein VIBHAR_02363 [Vibrio harveyi ATCC BAA-1116]
          Length = 365

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       V S  +G+
Sbjct: 118 TPKRIWIWLFFVNIYPFIIAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 ALAL-----GRRSDMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFLA 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K   L++LPQ
Sbjct: 223 EGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365


>gi|262165599|ref|ZP_06033336.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262025315|gb|EEY43983.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 365

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 123 WIWLVFVNIYPFFAAILLYGGLFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 182

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 183 RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSEGSEINKLLR 232

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 233 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 292

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 293 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYS 352

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 353 IWLEGKLHTGHKR 365



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P L+ + F+ 
Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVP-LITVLFMA 213

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLFA 204
             +L +       I       +     S   +       +             + LS + 
Sbjct: 214 SVMLPLFLSEGSEINKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWK 273

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVS 263
                   +     +P +  +   +F   +LVLI   +  L   +      N++G +T S
Sbjct: 274 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATES 333

Query: 264 PEFMSLYIALSCYTAAFIA 282
             F++L   + C+  +  +
Sbjct: 334 YVFVALVFWIFCFGMSRYS 352


>gi|258627558|ref|ZP_05722335.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258580140|gb|EEW05112.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
          Length = 365

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 123 WIWLVFVNIYPFFAAILLYGGLFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 182

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 183 RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSEGSEINKLLR 232

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 233 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 292

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 293 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYS 352

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 353 IWLEGKLHTGHKR 365



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P L+ + F+ 
Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVP-LITVLFMA 213

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLFA 204
             +L +       I       +     S   +       +             + LS + 
Sbjct: 214 SVMLPLFLSEGSEINKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWK 273

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVS 263
                   +     +P +  +   +F   +LVLI   +  L   +      N++G +T S
Sbjct: 274 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATES 333

Query: 264 PEFMSLYIALSCYTAAFIA 282
             F++L   + C+  +  +
Sbjct: 334 YVFVALVFWIFCFGMSRYS 352


>gi|218461591|ref|ZP_03501682.1| amino acid ABC transporter permease [Rhizobium etli Kim 5]
          Length = 276

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 11/257 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++ F       ++    +            R L    +T+   A   V   +L + L+ 
Sbjct: 30  ILVAFWALLATLLIFTVVNGWDPEKFTRYGPRYLHGLWVTLSLVAISVVCGAILSLPLA- 88

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGST 261
               ++R    +        YI  F   G P L  + L Y  L   +P L          
Sbjct: 89  ----MARLSKNRALNWFAYCYIYFF--RGTPLLAQLFLVYYGLGVFRPQLEAIGIWW--F 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +     A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA  
Sbjct: 141 FREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHEAAAALGIHKAIAFRKIILPQAFI 200

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             + P  ++ + L+K S++   +   DL+       ++T    +  L     YL++   +
Sbjct: 201 VALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFDY-QTYLWAAIFYLAIVEAL 259

Query: 382 ALFMNRLNAKIALKEKK 398
                 +  ++    K+
Sbjct: 260 RHLWAWIERRLTRHLKR 276



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L    ++   I+   +   RLS N+ + W    Y+  FR  P L 
Sbjct: 57  RYGPRYLHGLWVTLSLVAISVVCGAILSLPLAMARLSKNRALNWFAYCYIYFFRGTPLLA 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            +F +Y  +    P  +   +  F       GL   
Sbjct: 117 QLFLVYYGLGVFRPQLEAIGIWWFFREAWYCGLFAM 152


>gi|170760706|ref|YP_001785786.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407695|gb|ACA56106.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 211

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 19/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    L    ++        +FS  LGI+++     + ++   K  K +  L   T++ 
Sbjct: 6   DITIFILKGSIISFKLFIVTIIFSIPLGILIA-----MGKNSKIKPLKII--LSAYTWIF 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ +   Y   F  PV+       G  + P   + Y+       A++AE  R+G+
Sbjct: 59  RGTPLMLQLFFAY---FGLPVI-------GIRLEP-LTAAYLTFIINYGAYLAETFRAGI 107

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+S+L  A+G  D+
Sbjct: 108 ESIDKGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGDM 167

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     ++ +    I    I   IYL ++  + +    L  K A
Sbjct: 168 LRAAKEVVTRDF-TITPFFIAAAIYLLITAFLVIIFRTLERKYA 210



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + +F L    +I +  +G L+  G+ S  K +  I   Y  +FR  P ++ +FF 
Sbjct: 11  ILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIKPLKIILSAYTWIFRGTPLMLQLFFA 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +          +N 
Sbjct: 71  YFGLPVIGIRLEPLTAAYLTFIINY 95


>gi|83647881|ref|YP_436316.1| arginine ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83635924|gb|ABC31891.1| ABC-type arginine transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 235

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 7/196 (3%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-----VLGQFNFIGGSTV 262
           ++       KA+   Y  T +I G+P LVL+ L +             L     I     
Sbjct: 39  AKLSRNPISKAVGTAY--TTVIRGVPDLVLMLLIFYGGQILMNSLSDWLYDQFEIDTYIN 96

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F++  + +     A+++E  R   +AV RGQ+EA +A G+   +  + ++ PQ MR 
Sbjct: 97  INAFVAGVLTIGFIFGAYMSETFRGAFLAVERGQIEAGLAYGMNRWQIFKRIMFPQMMRH 156

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L + +L +LK ++L   +G  D+V                 +  + I+L+L+ +  
Sbjct: 157 ALPGLGNNWLVMLKTTALVSVIGMEDMVRAAHQASAALQAPFMFFIPVLLIFLALTSISE 216

Query: 383 LFMNRLNAKIALKEKK 398
               +L     +  ++
Sbjct: 217 FLFKKLETHYHVDSRR 232


>gi|239821011|ref|YP_002948196.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805864|gb|ACS22930.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 252

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 16/214 (7%)

Query: 187 AKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               +   VLGIVL+        L+R    +  +    + +  +++ G+P L++I     
Sbjct: 28  IVATLILSVLGIVLAFPLSVLLALARLSPWRLLRWPATVLV--YVVRGVPLLMVIL---W 82

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F  P+L   +  G       F ++   L  Y  A+++E+VR+G+ A+P+GQ EAA AL
Sbjct: 83  VYFLVPILIGRDVSG-------FTTMLCTLVIYEGAYLSEVVRAGIQALPKGQAEAARAL 135

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-Q 362
           G +H      V+LPQA+ +++P + SQ+++ +K ++L   +   +L      I NQ   +
Sbjct: 136 GHSHLGTMWFVILPQALYNMLPSMLSQFISTIKETTLGYVINVQELTFAANQINNQLLTK 195

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++  I    Y  +   +      L  +IA K 
Sbjct: 196 PFQVFFILAMTYYVVCFSLTQLAQWLERRIAHKR 229



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G V T  L+  G++ A  +  L+   RLS  +L+ W   V V V R +P L+VI ++Y
Sbjct: 25  LGGIVATLILSVLGIVLAFPLSVLLALARLSPWRLLRWPATVLVYVVRGVPLLMVILWVY 84

Query: 150 KSVL 153
             V 
Sbjct: 85  FLVP 88


>gi|210135129|ref|YP_002301568.1| amino acid ABC transporter [Helicobacter pylori P12]
 gi|210133097|gb|ACJ08088.1| amino acid ABC transporter [Helicobacter pylori P12]
          Length = 237

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+   ++ IV++L      +HF  +   A    Y+S  LI G P LV I + + 
Sbjct: 41  PLAVTSFILGLLIAIVVALIKIAPPKHFIHRALLAGVNFYVS--LIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SL   V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLTSVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++     R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEAVQKRMEK 234


>gi|167923549|ref|ZP_02510640.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei BCC215]
          Length = 324

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGS 260
           L     S          + L      ++  L    L  L   +    P     F  +  +
Sbjct: 102 LARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFAEVATT 161

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAM
Sbjct: 162 DLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 381 IALFMNRLNAKIALKEKK 398
           +++   ++  + A    +
Sbjct: 282 LSIVQAQVERRYARGAVR 299


>gi|330980534|gb|EGH78637.1| glutamine ABC transporter permease [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 233

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 105/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +       +  +   + I L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAGYVSYQ-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   I  +  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLSESTQIWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLAIS 213



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LA      A  I  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTLQLALVAWCLAMAIALLLVSIRLTGNKYAERLVAGYVSYQRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLSESTQIWLANYS 98


>gi|314940259|ref|ZP_07847432.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314941683|ref|ZP_07848562.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314947673|ref|ZP_07851082.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314950660|ref|ZP_07853740.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314992473|ref|ZP_07857894.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996867|ref|ZP_07861872.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313589010|gb|EFR67855.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313592933|gb|EFR71778.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313597207|gb|EFR76052.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313599455|gb|EFR78298.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640579|gb|EFS05159.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313645914|gb|EFS10494.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 237

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 19/237 (8%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
                + + + +  + L     T+       + S  LGIVL+L         H K  +  
Sbjct: 20  KEEKKMEYLIEVMPQLLVGALTTLKLFLFTLIGSLPLGIVLALGL-----SLHFKPLRY- 73

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            LL    +++ G P L+ +   +                   V   F +  IA     AA
Sbjct: 74  -LLQTYVWVMRGTPLLLQLIFIFY-----------GLPTIGIVFDRFEAALIAFILNYAA 121

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI R G+ ++P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SS
Sbjct: 122 YFAEIFRGGIQSIPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSS 181

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L   +G  D++  G   + +    +  +L    IYL+L+ ++ + M ++  K+    
Sbjct: 182 LIYILGLGDVMRAGKIAMERDA-TLLPLLGVAIIYLTLTGILTIVMKQVEGKLNYYR 237



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG + T  L    +I +  +G ++  G     K + ++ + YV V R  P L+ + F+
Sbjct: 35  LLVGALTTLKLFLFTLIGSLPLGIVLALGLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFI 94

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + ++  + D          LN              + 
Sbjct: 95  FYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSI 134


>gi|300692510|ref|YP_003753505.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
 gi|299079570|emb|CBJ52248.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
          Length = 227

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 6/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +N   L      M  + +I V + ++GIV       + R    +  +    
Sbjct: 1   MAYQFDFTSINADNLRVLGEGMVLSLEITVTAILVGIVWGTLL-AMMRLSGIRPLQLFGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y++ F       LV++ L + L   + +   FN    + +     S  +A + + AA+ 
Sbjct: 60  GYVNLFRSIP---LVMVLLWFFLIVPQVLQKIFNLSPATDMR--MTSALVAFALFEAAYY 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +V RGQM A+ ALG+T+ +A RLV+LPQA R++IP L +Q + L +++SL 
Sbjct: 115 SEIIRAGIQSVSRGQMFASYALGMTYGQAMRLVILPQAFRNMIPLLLTQAIILFQDTSLV 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +D  +    I  + G+ +E++L    IY  +    ++ + RL  K+
Sbjct: 175 YVSALSDFFTQAYNIGERDGRIVELLLFAGLIYFVICFGASVLVKRLQKKV 225



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 38/87 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G V +  +  + ++   + GTL+   RLS  + +    + YV +FR+IP ++V+
Sbjct: 15  LRVLGEGMVLSLEITVTAILVGIVWGTLLAMMRLSGIRPLQLFGQGYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            + +  V  VL    +          +
Sbjct: 75  LWFFLIVPQVLQKIFNLSPATDMRMTS 101


>gi|156972775|ref|YP_001443682.1| ABC amino acid transporter permease component [Vibrio harveyi ATCC
           BAA-1116]
 gi|156524369|gb|ABU69455.1| hypothetical protein VIBHAR_00440 [Vibrio harveyi ATCC BAA-1116]
          Length = 223

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS F   G P LV + L Y       +   F FI G      F +  I L+ + AA++A
Sbjct: 58  YISFF--RGTPLLVQLFLLYYG-----LPQIFPFIVGID---AFSAAVIGLTLHFAAYMA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA 
Sbjct: 108 ESIRAAIIGIDRSQMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 168 TLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 34/71 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLVFSLILSVILANIRVFKLPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  + P  
Sbjct: 75  YYGLPQIFPFI 85


>gi|55821172|ref|YP_139614.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823085|ref|YP_141526.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55737157|gb|AAV60799.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739070|gb|AAV62711.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 232

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + + ++ ++L L    +S   H K  + +  +Y+  F     P LV   + +    
Sbjct: 34  LGISIGALIVALLLGLIFGAMS-STHNKVLRGISRVYVEIF--QNTPLLVQFVVVFYGIS 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G+ + P  ++  + +  YT A+I+EI+R+G+ AVP+GQ EAA++ G T
Sbjct: 91  IL--------TDGNVMIPTSLTAILCVGVYTGAYISEIIRTGIEAVPKGQTEAALSQGFT 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +    R+++LPQA+ +I+PPLT+Q +NL+KN+S    +  AD++         T   +  
Sbjct: 143 YADTMRIIILPQAVHTILPPLTNQVVNLIKNTSTVAIISGADIMFTAKAWAYDTTNYVPA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
                F+Y  +   +A +  R  
Sbjct: 203 FAGAAFLYFIMCFPLATWARRKE 225



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +I A ++G + GA   + NK++  I RVYVE+F+N P LV    +
Sbjct: 26  FAKGFLYTLGISIGALIVALLLGLIFGAMSSTHNKVLRGISRVYVEIFQNTPLLVQFVVV 85

Query: 149 YKSV 152
           +  +
Sbjct: 86  FYGI 89


>gi|226363678|ref|YP_002781460.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242167|dbj|BAH52515.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 243

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 13/185 (7%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+   H    +     +I  F   G   LV +   + L +  P+           +    
Sbjct: 42  LAARAHNIVIRGSARAFIEFF--RGTSLLVQL---FWLFYVVPLF--------GYLIDPV 88

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +   +AL     A+ AE+VR  + +VP+ Q EAA AL  +H +  R V+ PQA   +IPP
Sbjct: 89  LCGILALGLNYGAYGAEVVRGAINSVPQSQWEAATALDFSHWQRLRRVVFPQAWAEMIPP 148

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LT+  + LLK ++LA  +   DL      +   TG  +    + + IY  +  ++ L MN
Sbjct: 149 LTNLLIQLLKGTALASYILLQDLTFEIDQLRQTTGNTLFAFGVGLVIYFVIGYVLTLLMN 208

Query: 387 RLNAK 391
            L  +
Sbjct: 209 ALEVR 213


>gi|170742664|ref|YP_001771319.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196938|gb|ACA18885.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 240

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 12/227 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS    T+ T    +V +F +G V+ +      R    +  +A    Y+  F    +P
Sbjct: 24  MLLSGLLWTIVTALCAWVIAFAVGSVIGVM-----RTLPNRFAQAFGNGYVELF--RNIP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + L +   F  P +   ++       P   F +  + L  +TA+ +AE VR+G+ A
Sbjct: 77  LLVQMFLWF---FVLPEMLPQSWGTWLKQLPDAPFYTAVVCLGFFTASRVAEQVRAGIQA 133

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  A  ALGLT  +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +
Sbjct: 134 LPRGQRMAGTALGLTTSQTYRYVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTA 193

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   + Q  E       +Y+ +++++      L  K+A+   +
Sbjct: 194 RARSMQEFSFQVFEAFTAATILYIIINLLVVTAAGYLERKVAIPGAR 240



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 39/82 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA  +L G + T   A    + A  +G+++G  R   N+        YVE+FRNIP 
Sbjct: 18  TGTYADMLLSGLLWTIVTALCAWVIAFAVGSVIGVMRTLPNRFAQAFGNGYVELFRNIPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           LV +F  +  +  +LP    + 
Sbjct: 78  LVQMFLWFFVLPEMLPQSWGTW 99


>gi|94500103|ref|ZP_01306637.1| ABC-type arginine transport system, permease component
           [Oceanobacter sp. RED65]
 gi|94427676|gb|EAT12652.1| ABC-type arginine transport system, permease component
           [Oceanobacter sp. RED65]
          Length = 220

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 9/194 (4%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY---QLHFDKPVLGQFNF----IG 258
            +++    KT + +   Y  T LI G+P LVL+ L +   Q+ F+      +      I 
Sbjct: 22  AVAKLSSSKTAQVVATTY--TTLIRGVPDLVLMMLIFFGGQIAFNSFTEWLYFASDEQID 79

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 EF++  I +     A++ E  R   IAV  GQ+EAA A G+   +    ++ PQ
Sbjct: 80  IFINIDEFVAGVITIGFIFGAYMTETFRGAFIAVDVGQIEAAKAYGMNRWQVFTRIMFPQ 139

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            MR  +P L + +  LLK ++L   +G AD+V +       TG+    ++   F+YL L+
Sbjct: 140 MMRHALPGLGNNWQVLLKTTALVSVIGLADMVRLATEAAKTTGEPFLFLIPVAFVYLMLT 199

Query: 379 IMIALFMNRLNAKI 392
            +      RL  + 
Sbjct: 200 AISEWVFKRLKKRY 213


>gi|330960988|gb|EGH61248.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 220

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L     +     +  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGLM-NAFALLSRYRALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRALEQRLAIRR 220


>gi|288933972|ref|YP_003438031.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288888701|gb|ADC57019.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 506

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +G F +   +        T   +   S+ +G+V+       ++    +  K    L
Sbjct: 1   MAFDWGYFFSLFSIGAFWQACVTVIVVSTLSWGIGLVVGFLL-ACAKLSAPRWVKIPVEL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F    +P +VL+   Y L    PV      +        F++  ++++   AA++A
Sbjct: 60  YIWFF--RSVPLMVLLVFVYNLPQLFPVTQPLLGV-------PFIAGLVSMTVTEAAYMA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL++V +GQ EA  AL  +     RL+++PQA R  +P L ++Y+ ++K SS+  
Sbjct: 111 EIHRGGLLSVAKGQSEAGHALSFSFIGIQRLIVIPQAFRISLPTLINEYITIIKLSSILS 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V   +L+  G  +  Q    +E +L     Y+ +  +       L  ++ ++ K+
Sbjct: 171 VVSLPELLLTGQRLYAQNFLVMETLLAVAVYYVMVVTVFTWLFRALENRLDIQRKR 226



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A     V    ++        ++G L+   +LSA + V     +Y+  FR++P +V++ F
Sbjct: 16  AFWQACVTVIVVSTLSWGIGLVVGFLLACAKLSAPRWVKIPVELYIWFFRSVPLMVLLVF 75

Query: 148 LYK 150
           +Y 
Sbjct: 76  VYN 78


>gi|238761028|ref|ZP_04622005.1| Glutamine transport system permease protein glnP [Yersinia
           kristensenii ATCC 33638]
 gi|238761281|ref|ZP_04622257.1| Glutamine transport system permease protein glnP [Yersinia
           kristensenii ATCC 33638]
 gi|238700255|gb|EEP92996.1| Glutamine transport system permease protein glnP [Yersinia
           kristensenii ATCC 33638]
 gi|238700508|gb|EEP93248.1| Glutamine transport system permease protein glnP [Yersinia
           kristensenii ATCC 33638]
          Length = 189

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 17/205 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +   ++G++        +R +     + + L++I   LI G P +V +   Y   F  P
Sbjct: 1   MLGGLIIGVIAGF-----ARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FALP 50

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++              F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R 
Sbjct: 51  MMM-------PVRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRD 103

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI   
Sbjct: 104 TLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSA 163

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
              IYL +++ ++  + RL  K+ +
Sbjct: 164 VAVIYLIITLALSFVLRRLERKLKI 188


>gi|225352766|ref|ZP_03743789.1| hypothetical protein BIFPSEUDO_04396 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156373|gb|EEG69942.1| hypothetical protein BIFPSEUDO_04396 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 380

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 115/271 (42%), Gaps = 21/271 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +   VF  +  L+++              +            +  L     
Sbjct: 21  IRIVNWIAGI---VFAIVVVLILMRLHNPPDGENQLSWELWKPALDAEAWTDFYLPGLWA 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    + + + G++  +      R       +A+    +       +  L++   +
Sbjct: 78  TIRASVLAVIGAVLFGLIFGI-----GRLLPNIVIRAVSGAIVEFARAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +           F F G S+  P + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 W-----------FAFAGMSS--PAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTRTQSLMEIEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++ +++   IY     +++     L  ++
Sbjct: 240 NILQTLVVAAVIYFIACWLLSRLAEWLPERM 270



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 38/100 (38%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T   +   +I A + G + G GRL  N ++  +    V
Sbjct: 56  ELWKPALDAEAWTDFYLPGLWATIRASVLAVIGAVLFGLIFGIGRLLPNIVIRAVSGAIV 115

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           E  R +P L+++ F ++              +   + + N
Sbjct: 116 EFARAVPVLLLMIFFWRWFAFAGMSSPAYWAVVLALVIYN 155


>gi|182683630|ref|YP_001835377.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|182628964|gb|ACB89912.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
          Length = 305

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/315 (19%), Positives = 125/315 (39%), Gaps = 33/315 (10%)

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
            ++A  G + + ++G +V   R     ++A +   Y+E+ RN P L+ +FFLY  +  + 
Sbjct: 1   MYIAVWGSLGSFLLGLIVSIIRHYRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIG 60

Query: 157 PIPDHSIVLPFGM---------------FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            +    +    G+                     L      +     I + S +L ++  
Sbjct: 61  IVLSSEVYATLGLVFLGGSAMQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFG 120

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                +    H +  + L  LY+    I        + L + ++F        N  G   
Sbjct: 121 TVMGIIM-TSHSRIIRFLTRLYLEFIRIMP-----QLVLLFIVYFGLARNFNINISGE-- 172

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                 S+ I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +    +++PQ +R
Sbjct: 173 -----TSVIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNVQLYYHIIIPQVLR 227

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLS 376
            ++P   +    ++K +SL V +G  ++  VG  II+     I      I    + +Y +
Sbjct: 228 RLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTTSFWIYGTILILYFA 287

Query: 377 LSIMIALFMNRLNAK 391
           +   I+     L   
Sbjct: 288 VCYPISKLSTHLEKH 302



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 58  SLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG 117
           +LG+ FL   A   +    +      +    IL G   T  ++   ++ + + GT++G  
Sbjct: 70  TLGLVFLGGSA---MQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFGTVMGII 126

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             S ++++ ++ R+Y+E  R +P LV++F +Y  +    
Sbjct: 127 MTSHSRIIRFLTRLYLEFIRIMPQLVLLFIVYFGLARNF 165


>gi|29375694|ref|NP_814848.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227518373|ref|ZP_03948422.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227552902|ref|ZP_03982951.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229546203|ref|ZP_04434928.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229550388|ref|ZP_04439113.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|256618702|ref|ZP_05475548.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ATCC 4200]
 gi|256852768|ref|ZP_05558138.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256958615|ref|ZP_05562786.1| amino acid ABC transporter permease [Enterococcus faecalis DS5]
 gi|256962286|ref|ZP_05566457.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis Merz96]
 gi|257078031|ref|ZP_05572392.1| amino acid ABC transporter permease [Enterococcus faecalis JH1]
 gi|257082919|ref|ZP_05577280.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis E1Sol]
 gi|257085621|ref|ZP_05579982.1| amino acid ABC transporter permease [Enterococcus faecalis Fly1]
 gi|257086473|ref|ZP_05580834.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis D6]
 gi|257089530|ref|ZP_05583891.1| ABC polar amino acid transporter permease [Enterococcus faecalis
           CH188]
 gi|257418947|ref|ZP_05595941.1| ABC amino acid transporter permease [Enterococcus faecalis T11]
 gi|257422965|ref|ZP_05599955.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|293383315|ref|ZP_06629230.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|293387528|ref|ZP_06632077.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294780989|ref|ZP_06746341.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300860018|ref|ZP_07106106.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307268768|ref|ZP_07550136.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307274580|ref|ZP_07555760.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307278846|ref|ZP_07559909.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307288577|ref|ZP_07568561.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|307291101|ref|ZP_07570986.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|312899593|ref|ZP_07758919.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312903651|ref|ZP_07762827.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312905822|ref|ZP_07764842.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312909123|ref|ZP_07767982.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312951370|ref|ZP_07770268.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|29343155|gb|AAO80918.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227074051|gb|EEI12014.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227177974|gb|EEI58946.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229304510|gb|EEN70506.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229308727|gb|EEN74714.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|256598229|gb|EEU17405.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ATCC 4200]
 gi|256711227|gb|EEU26265.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256949111|gb|EEU65743.1| amino acid ABC transporter permease [Enterococcus faecalis DS5]
 gi|256952782|gb|EEU69414.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis Merz96]
 gi|256986061|gb|EEU73363.1| amino acid ABC transporter permease [Enterococcus faecalis JH1]
 gi|256990949|gb|EEU78251.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis E1Sol]
 gi|256993651|gb|EEU80953.1| amino acid ABC transporter permease [Enterococcus faecalis Fly1]
 gi|256994503|gb|EEU81805.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis D6]
 gi|256998342|gb|EEU84862.1| ABC polar amino acid transporter permease [Enterococcus faecalis
           CH188]
 gi|257160775|gb|EEU90735.1| ABC amino acid transporter permease [Enterococcus faecalis T11]
 gi|257164789|gb|EEU94749.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|291079338|gb|EFE16702.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|291083038|gb|EFE20001.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294451935|gb|EFG20385.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295112702|emb|CBL31339.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Enterococcus sp. 7L76]
 gi|300850836|gb|EFK78585.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306497755|gb|EFM67287.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306500484|gb|EFM69817.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504517|gb|EFM73724.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306508732|gb|EFM77822.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306514896|gb|EFM83443.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310628161|gb|EFQ11444.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630630|gb|EFQ13913.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310633004|gb|EFQ16287.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311290547|gb|EFQ69103.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311293272|gb|EFQ71828.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315028075|gb|EFT40007.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315030716|gb|EFT42648.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315031596|gb|EFT43528.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034962|gb|EFT46894.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315144631|gb|EFT88647.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315148455|gb|EFT92471.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315150402|gb|EFT94418.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153641|gb|EFT97657.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315156541|gb|EFU00558.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315158367|gb|EFU02384.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315160938|gb|EFU04955.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315165529|gb|EFU09546.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315168386|gb|EFU12403.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315170969|gb|EFU14986.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315573710|gb|EFU85901.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315577479|gb|EFU89670.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|315582675|gb|EFU94866.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|323480357|gb|ADX79796.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           62]
 gi|329576391|gb|EGG57904.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 237

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 18/248 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +      S L   P   +     F      +              + + + ++   L +F
Sbjct: 1   MFLLANISWLEEGPFALYRWEALF------QDWRIFGQAFLYTILLSLGAILVAFALGIF 54

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              LS     K   A+  +Y+  F     P L+   + Y   +  P+L        +T+ 
Sbjct: 55  FGSLSAT-KSKLLHAISRVYVEFF--QNTPLLIQFIVVY---YGFPLLSPLLSFSITTI- 107

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  + +  Y  A+I+E+VRSG+ AVPRGQ EAA + GLT+ +  R V+LPQA R +
Sbjct: 108 -----AILCVGLYHGAYISEVVRSGIGAVPRGQFEAAYSQGLTYGQTMRYVILPQAWRIM 162

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +  AD++    +  +     I    +  F+Y  L   +A 
Sbjct: 163 LPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSVNLNYIPAFALAGFLYFILCFPLAN 222

Query: 384 FMNRLNAK 391
              ++  K
Sbjct: 223 LARKMEEK 230



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                  F+ T  L+   ++ A  +G   G+   + +KL+  I RVYVE F+N P L+  
Sbjct: 27  WRIFGQAFLYTILLSLGAILVAFALGIFFGSLSATKSKLLHAISRVYVEFFQNTPLLIQF 86

Query: 146 FFLYKSVLSVLP 157
             +Y     + P
Sbjct: 87  IVVYYGFPLLSP 98


>gi|322368977|ref|ZP_08043544.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haladaptatus paucihalophilus DX253]
 gi|320551708|gb|EFW93355.1| ABC-type transport system permease protein (probable substrate
           glutamine) [Haladaptatus paucihalophilus DX253]
          Length = 276

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 107/256 (41%), Gaps = 12/256 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +   +   F       +L I    +     + +  + +    L +       V S  
Sbjct: 26  VRWLGIAIAGVFSLGVAFFLLLILTQFVDYQLLVTILPQFIDALLLVLQIILISGVLSLT 85

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
            G+++ L      R       + +  LY+  F   G P L  + + Y         GQF 
Sbjct: 86  FGVMVGL-----GRVSQTGFTQRIATLYVEFF--RGTPLLFQLFVVYLGVPAFWPPGQFP 138

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               S     F +  I L+    A+I E V+ G+ +V  GQ EAA +LG+++  + R V+
Sbjct: 139 LQNWS-----FAAAIIGLTLNHTAYIGEAVKGGINSVSGGQSEAARSLGMSYIDSMRYVV 193

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA R+ +  + +  + L+K++SL   +   +L+SV   + + T  A   I++    YL
Sbjct: 194 LPQAWRNALAAIGNDLVILVKDTSLLTVLAIPELISVFRNVNSATFDAWTPIVVVSVAYL 253

Query: 376 SLSIMIALFMNRLNAK 391
            +++ +   +  +  +
Sbjct: 254 VITVPLGKLVRTMEER 269



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 34/95 (35%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I    V Y    +     +   +    +     + +   G +VG GR+S       I  +
Sbjct: 48  ILTQFVDYQLLVTILPQFIDALLLVLQIILISGVLSLTFGVMVGLGRVSQTGFTQRIATL 107

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           YVE FR  P L  +F +Y  V +  P     +   
Sbjct: 108 YVEFFRGTPLLFQLFVVYLGVPAFWPPGQFPLQNW 142


>gi|260460787|ref|ZP_05809037.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033364|gb|EEW34625.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 210

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 13/186 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +       +AL  +Y+S F   G P L+ +   + L+F  P +              F +
Sbjct: 37  KMSRSAILRALGAVYVSLF--RGTPCLIQL---FVLYFGGPQI--------GINLDPFAA 83

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L     A++AE +R  +IAV RGQ EAA  +G +  +  R V+LPQA R +I PL 
Sbjct: 84  GVIGLGLNIGAYMAESIRGAVIAVDRGQTEAARTIGFSRFQTLRKVVLPQAARLMIRPLG 143

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + LLK S+L   +   +L       I  T +  EI  +   +Y+ +   +A  ++ L
Sbjct: 144 VNTVALLKGSALVSTISVVELTYTAQRFIGSTYKPFEIFGVAALLYMVMVYALARIVDML 203

Query: 389 NAKIAL 394
           + + A+
Sbjct: 204 DKRFAI 209


>gi|254713632|ref|ZP_05175443.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti
           M644/93/1]
 gi|254716014|ref|ZP_05177825.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti
           M13/05/1]
 gi|261217781|ref|ZP_05932062.1| ABC transporter [Brucella ceti M13/05/1]
 gi|261321371|ref|ZP_05960568.1| ABC transporter [Brucella ceti M644/93/1]
 gi|260922870|gb|EEX89438.1| ABC transporter [Brucella ceti M13/05/1]
 gi|261294061|gb|EEX97557.1| ABC transporter [Brucella ceti M644/93/1]
          Length = 240

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 14/226 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +     +           I + +   G ++S+    L    H +  + +   Y+
Sbjct: 1   MNFDFSVIFDNWTLFARGTWLTIVIAIVAIATGFLISI-PIALMALSHRRPLRWISSAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       +VL    Y L F                 PE +   IAL+ + +++ AEI
Sbjct: 60  EWFRNI-PFIVVLYLFFYGLPF------------MGVRLPESIVGTIALAFFASSYFAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S+   +
Sbjct: 107 IRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             A+L   G  I  +T    EI L    IY  ++ + A  M+R   
Sbjct: 167 TMAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHRTEK 212



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T    G   T  +A   +    +I   +    LS  + + WI   YVE FRNIP +VV+
Sbjct: 12  WTLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPLRWISSAYVEWFRNIPFIVVL 71

Query: 146 FFLYKSVL 153
           +  +  + 
Sbjct: 72  YLFFYGLP 79


>gi|218682669|ref|ZP_03530270.1| amino acid ABC transporter permease [Rhizobium etli CIAT 894]
          Length = 219

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L       + + SF  G  + L    L R    KT + L   YI  F  
Sbjct: 4   FTLWDILRNLLLATRWTILLSLVSFASGGAVGLGLLFL-RIGKRKTFRVLAKYYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F         P +++  +AL+ ++AAF+AEI R  +
Sbjct: 61  QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLAAGLALTLWSAAFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ RGQ EA+ +LG+   +  R V+LPQA+R  IPP     + ++K ++L   +GF +L
Sbjct: 110 ESIARGQWEASASLGMVRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 170 SKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 217



 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 32/107 (29%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+         +G  +   R+   K    + + Y+E+F+  P L
Sbjct: 7   WDILRNLLLATRWTILLSLVSFASGGAVGLGLLFLRIGKRKTFRVLAKYYIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F  +  +          +     + L +             +  
Sbjct: 67  MQLFIAFFGLGLFGIDVPAWLAAGLALTLWSAAFLAEIWRGCVESIA 113


>gi|27381510|ref|NP_773039.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27354678|dbj|BAC51664.1| blr6398 [Bradyrhizobium japonicum USDA 110]
          Length = 216

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 13/193 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L R    K  ++L  +++  F   G P L+ + L Y   +  PVL           
Sbjct: 36  LIVALLRTAERKWVRSLAAMFVDFF--QGTPMLMQLFLVY---YGLPVL--------GFH 82

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              +++  I L+ + +AF+ EI R G++AVPRGQMEAA ALGL +      V+LPQA R 
Sbjct: 83  VNVWVAASIGLTLHASAFLGEIWRGGIMAVPRGQMEAASALGLGYTSRMIDVVLPQAFRL 142

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            + P     + L+K +SLA  +GF +L      + + T + +    +    Y +L   ++
Sbjct: 143 SLAPTVGFLVQLIKGTSLASIIGFVELSRSAQIVASTTYRPLLAYGMAGLCYFALCFPLS 202

Query: 383 LFMNRLNAKIALK 395
            + + L  ++A +
Sbjct: 203 RYSSTLERRLATR 215


>gi|238762252|ref|ZP_04623224.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
 gi|238699599|gb|EEP92344.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
          Length = 217

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 84/227 (37%), Gaps = 14/227 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +    ++ V  F+L  VL +    L      ++    P+   
Sbjct: 1   MDFDFAFAWSILPDLLPGLLVTLEVVVAGFLLATVLGMVVAVL---LQLQSPFITPVCQA 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                   P LV +   Y L F  P+             P   +  + +  Y  A+IAE 
Sbjct: 58  YVTFFRNTPLLVQL---YFLFFALPL--------SGLALPAMATGMVGMGLYYGAYIAEA 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  +  VP+GQ EAA AL          ++ PQA + ++P L +  + + K + L   +
Sbjct: 107 FRGAINGVPQGQWEAARALDFPPLTRWTRIIFPQAFKPMLPVLGNYLIGMFKETPLLAVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L      I   T +  E   +   ++L +S+  +L  + L  +
Sbjct: 167 TIPELFQAAKQIAGLTYRYNEPYTLMALLFLLISLPTSLLFSYLERR 213



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 41/96 (42%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    S    +L G + T  +  +G + AT++G +V       +  +  +C+ YV  FR
Sbjct: 4   DFAFAWSILPDLLPGLLVTLEVVVAGFLLATVLGMVVAVLLQLQSPFITPVCQAYVTFFR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           N P LV ++FL+ ++               GM L  
Sbjct: 64  NTPLLVQLYFLFFALPLSGLALPAMATGMVGMGLYY 99


>gi|189349397|ref|YP_001945025.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221202315|ref|ZP_03575349.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD2M]
 gi|221209129|ref|ZP_03582123.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD2]
 gi|221214520|ref|ZP_03587491.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD1]
 gi|189333419|dbj|BAG42489.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221165777|gb|EED98252.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD1]
 gi|221171033|gb|EEE03486.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD2]
 gi|221177889|gb|EEE10302.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia multivorans CGD2M]
 gi|325525015|gb|EGD02927.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 225

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGALPTLWTGAIVTFKITLIAIVVGIVWGTLL-ALMRLSGVKPLAWFAKAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P + Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQVLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSVASALVKGLQKKVTR 225



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|186477119|ref|YP_001858589.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193578|gb|ACC71543.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 218

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 18/236 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L   +      L    +T++  A  FV S +LG+VL+L   ++SR+    T  +  + 
Sbjct: 1   MFLQNAIDFLPILLKGAVITIEITACAFVLSSILGLVLALL--KVSRNRAASTFGSTVIN 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                LI GLP +V +   + ++F  P L              F +  I L    +A+ A
Sbjct: 59  -----LIRGLPIIVQL---FYIYFVLPDL--------GVQLSAFQAGVIGLGIAYSAYQA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ A+  GQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A 
Sbjct: 103 ENFRAGIEAIDHGQIEAAHAIGMRGPLIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  A++   G  I + T Q + +  +   +YL LS+ +   +N++  ++AL++ +
Sbjct: 163 TITVAEITRAGQLIASSTFQNMTVYTLVALLYLVLSLPLMFGVNQIGKRLALRKSR 218


>gi|33599679|ref|NP_887239.1| putative permease component of ABC transporter [Bordetella
           bronchiseptica RB50]
 gi|33567276|emb|CAE31189.1| putative permease component of ABC transporter [Bordetella
           bronchiseptica RB50]
          Length = 216

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 18/206 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V    LG+VL+LF     R       + L   Y+S F    L           ++F 
Sbjct: 25  SSAVLGTALGLVLALF-----RLSPVAPLRWLAFWYVSIFRGTPLL-----LQLLLIYFG 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P         G  + P   +  +ALS  +AA+++E  RSG++ V RGQ+EAA +LG+  
Sbjct: 75  LPHY-------GIELEP-VPTAILALSLCSAAYLSENFRSGILGVDRGQIEAAQSLGMGA 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++   ++LPQA+R   P + ++Y+ L+K++SLA  +   +L  +   + + T + +E+ 
Sbjct: 127 ARSLFRIILPQAIRIAAPTMGTRYIALMKDTSLASTITVVELTKMAEQVGSNTFRYMEMF 186

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           +I   +Y  ++ M+      + +K+ 
Sbjct: 187 IIAGALYWVINQMLTFIQVWVESKLG 212



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
             +  T +G ++   RLS    + W+   YV +FR  P L+ +  +Y  +      
Sbjct: 26  SAVLGTALGLVLALFRLSPVAPLRWLAFWYVSIFRGTPLLLQLLLIYFGLPHYGIE 81


>gi|329116944|ref|ZP_08245661.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907349|gb|EGE54263.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 234

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 10/179 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K+ + +  +Y+   L    P LV +   +         G      G  +   FM+  
Sbjct: 57  SKRKSFRTIARIYVE--LYQNTPLLVQLVFVFY--------GLAIITHGHLMISTFMTAV 106

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+IAE++RSG+ +VPRGQ+EAA++ G T+ +   L++LPQA+R+I+PP+T+Q
Sbjct: 107 LCVGIYHGAYIAEVIRSGIESVPRGQIEAALSQGFTYEQTMSLIVLPQALRTILPPMTNQ 166

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +NL+KN+S+   +  AD++         T   +        +Y  L   +A +     
Sbjct: 167 VVNLIKNTSIVAIISGADIMFTAKAWAYDTTNYVPAFAGAAILYFILCYPLAHWARHKE 225



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 36/81 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                  F+ T  ++   ++ A I+GT+ GA   S  K    I R+YVE+++N P LV +
Sbjct: 23  LDIFFKAFLYTLGMSIGALLLALILGTIFGAMSTSKRKSFRTIARIYVELYQNTPLLVQL 82

Query: 146 FFLYKSVLSVLPIPDHSIVLP 166
            F++  +  +           
Sbjct: 83  VFVFYGLAIITHGHLMISTFM 103


>gi|323496925|ref|ZP_08101953.1| amino acid ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
 gi|323317999|gb|EGA70982.1| amino acid ABC transporter permease protein [Vibrio sinaloensis DSM
           21326]
          Length = 223

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 112/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + M L    L +   TM+      +FS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMMELMPILLKYLGTTMEMATWGLIFSLILSVILANI-----RVFKVPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P L   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQIFPWLVGLD---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVVLTRVQIWAEAKL 217



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G+I + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLIFSLILSVILANIRVFKVPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPI 158
           Y  +  + P 
Sbjct: 75  YYGLPQIFPW 84


>gi|157144753|ref|YP_001452072.1| hypothetical protein CKO_00480 [Citrobacter koseri ATCC BAA-895]
 gi|157081958|gb|ABV11636.1| hypothetical protein CKO_00480 [Citrobacter koseri ATCC BAA-895]
          Length = 238

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WSDGYRFTGVAITLWLLISSVVMGGILALFL-AIGRVSSNKFIQF--PIWLFTYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   + +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|15598120|ref|NP_251614.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           PAO1]
 gi|107102473|ref|ZP_01366391.1| hypothetical protein PaerPA_01003535 [Pseudomonas aeruginosa PACS2]
 gi|218890877|ref|YP_002439743.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           LESB58]
 gi|254235905|ref|ZP_04929228.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           C3719]
 gi|254241588|ref|ZP_04934910.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           2192]
 gi|313108081|ref|ZP_07794240.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           39016]
 gi|9949018|gb|AAG06312.1|AE004718_9 histidine transport system permease HisQ [Pseudomonas aeruginosa
           PAO1]
 gi|126167836|gb|EAZ53347.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           C3719]
 gi|126194966|gb|EAZ59029.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           2192]
 gi|218771102|emb|CAW26867.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           LESB58]
 gi|310880742|gb|EFQ39336.1| histidine transport system permease HisQ [Pseudomonas aeruginosa
           39016]
          Length = 229

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 2/209 (0%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                +LG VL       ++    +  +AL   Y  T LI  +P LV++ L +       
Sbjct: 20  LALGSLLGAVLIGLLGASAKLAANRPLRALASGY--TTLIRSVPDLVIMLLLFFSLQILL 77

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                    G      F +  + L+    A+  E  R    AVP GQ+EAA A G+   +
Sbjct: 78  NRVTDALGIGQVDIDPFAAGCVTLAFIYGAYFTETFRGAFQAVPAGQVEAAQAYGMGRWR 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R VLLPQ +R  +P + + +  L+K+++L   +G  DLV         T Q     L+
Sbjct: 138 VFRRVLLPQMLRYALPGIGNNWQVLVKSTALVSIIGLGDLVKATQDAGKGTLQFFHFTLV 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IYL+++ +    +  L  + +L  ++
Sbjct: 198 CGLIYLAITAISNAALLWLERRSSLGVRR 226



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   IL G + T  LA   ++ A +IG L  + +L+AN+ +  +   Y  + R++P L
Sbjct: 4   DGFGPQILAGTLVTLKLALGSLLGAVLIGLLGASAKLAANRPLRALASGYTTLIRSVPDL 63

Query: 143 VVIFFLYKSV 152
           V++  L+ S+
Sbjct: 64  VIMLLLFFSL 73


>gi|298487227|ref|ZP_07005276.1| glutamine transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|298158251|gb|EFH99322.1| glutamine transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320324044|gb|EFW80127.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|330890818|gb|EGH23479.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330985342|gb|EGH83445.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 220

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|293603169|ref|ZP_06685602.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292818400|gb|EFF77448.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 219

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 17/221 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+       + +   GIVL+L      R    +    + +  +  F       L
Sbjct: 16  LQGAAMTIMLTVVTMLLAVPGGIVLALM-----RLSSNRIANGIAVAIVEFFRN-----L 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            LI + Y   +  P+     F           +  +AL    +A+ +E  R+G+ ++ +G
Sbjct: 66  PLILVIYWAFYVMPMALDVQF-------SALTTALVALVLNVSAYNSETFRAGINSIRKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA+A+G++  +A   VL+PQA R I+P L S +++L K++SL   +  ++L      
Sbjct: 119 QMEAALAMGMSRHQAMFKVLIPQAARRILPVLASTWISLFKDTSLVSVIAVSELAYASMQ 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  Q+ + +E++     IY  +    A  ++ ++ K  +KE
Sbjct: 179 VRAQSFRVLEMLTAMAVIYWLMGYPQAKLVDWIHRKYGVKE 219



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 34/69 (49%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  L    M+ A   G ++   RLS+N++   I    VE FRN+P ++VI+
Sbjct: 13  DVLLQGAAMTIMLTVVTMLLAVPGGIVLALMRLSSNRIANGIAVAIVEFFRNLPLILVIY 72

Query: 147 FLYKSVLSV 155
           + +  +   
Sbjct: 73  WAFYVMPMA 81


>gi|256762126|ref|ZP_05502706.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256683377|gb|EEU23072.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
          Length = 235

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 18/246 (7%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
                S L   P   +     F      +              + + + ++   L +F  
Sbjct: 1   MLANISWLEEGPFALYRWEALF------QDWRIFGQAFLYTILLSLGAILVAFALGIFFG 54

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            LS     K   A+  +Y+  F     P L+   + Y   +  P+L        +T+   
Sbjct: 55  SLSAT-KSKLLHAISRVYVEFF--QNTPLLIQFIVVY---YGFPLLSPLLSFSITTI--- 105

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                + +  Y  A+I+E+VRSG+ AVPRGQ EAA + GLT+ +  R V+LPQA R ++P
Sbjct: 106 ---AILCVGFYHGAYISEVVRSGIGAVPRGQFEAAYSQGLTYGQTMRYVILPQAWRIMLP 162

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLT+Q +NL+KN+S    +  AD++    +  +     I    +  F+Y  L   +A   
Sbjct: 163 PLTNQVVNLIKNTSTVAIISGADVMFAANSWSSVNLNYIPAFALAGFLYFILCFPLANLA 222

Query: 386 NRLNAK 391
            ++  K
Sbjct: 223 RKMEEK 228



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                  F+ T  L+   ++ A  +G   G+   + +KL+  I RVYVE F+N P L+  
Sbjct: 25  WRIFGQAFLYTILLSLGAILVAFALGIFFGSLSATKSKLLHAISRVYVEFFQNTPLLIQF 84

Query: 146 FFLYKSVLSVLP 157
             +Y     + P
Sbjct: 85  IVVYYGFPLLSP 96


>gi|315124439|ref|YP_004066443.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315018161|gb|ADT66254.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 233

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        + L   YI   LI G P LV + L Y +  
Sbjct: 40  LIISFFSLLLSIILGGVFCAFS-LSSIVFLRFLSTFYIE--LIRGTPLLVQVLLMYYIIA 96

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +   L              +++  I LSC++A ++AEI R+G++++   Q+E+A ALGL 
Sbjct: 97  NNLGLDN-----------RYVAGVIILSCFSATYLAEIFRAGILSISISQLESARALGLK 145

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      I + T   +E 
Sbjct: 146 EMQVFAYVIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQSAQEINSYTFATLEA 205

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +I    YL L++ I++F   L  K
Sbjct: 206 YVILAITYLILTLPISIFSRYLERK 230



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 44/87 (50%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      +++ ++Y    L GF+NT  ++F  ++ + I+G +  A  LS+   + ++
Sbjct: 12  SFSISAYHFDFSAIATYKEKFLQGFLNTLIISFFSLLLSIILGGVFCAFSLSSIVFLRFL 71

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 72  STFYIELIRGTPLLVQVLLMYYIIANN 98


>gi|308184722|ref|YP_003928855.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           SJM180]
 gi|308060642|gb|ADO02538.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           SJM180]
          Length = 240

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K        Y+S  LI G P LV I + + 
Sbjct: 44  PLAIISFILGLFIAVMVALIKIAPPKHFVHKALLTGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|315633804|ref|ZP_07889093.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Aggregatibacter segnis ATCC 33393]
 gi|315477054|gb|EFU67797.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Aggregatibacter segnis ATCC 33393]
          Length = 220

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 9/214 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S VLG+ L +    L  +     GK   LL     L+ GLP ++++ L Y  
Sbjct: 15  MTLGLAVCSLVLGLFLGMLFAVLEANRF--VGKPTALL---VALLRGLPEILVVLLVYFG 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             +   L      G       F     ALS   AA+ ++ +R  + A+ +GQ E+  ALG
Sbjct: 70  SSELVEL----LTGEYVEFGAFGCGVFALSLIFAAYASQTLRGAIQAIAKGQWESGTALG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+     I   T Q  
Sbjct: 126 LSKGYTFLRIIMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLMRQAQLINTNTHQPF 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I   IYL ++++  + + +L  +    E++
Sbjct: 186 TWYGIAALIYLLVTLVSQVGIRKLELRFTRFERE 219


>gi|269960968|ref|ZP_06175337.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269834187|gb|EEZ88277.1| amino acid ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 246

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ V S +L +VL +    L++    K  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  VTIEVAVLSLILAVVLGMLG-ALAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINETLNEWFTSSNPDHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDKGELEAAKAYGMSPVMSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V +       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLEDMVRMSSLAAGTTKMPFTFYMAVAIIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   +I A ++G L    +L+  K    I  +Y  + R IP LV+
Sbjct: 7   YEASILKGALVTIEVAVLSLILAVVLGMLGALAKLAPYKWARAIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFTSSNPDHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|240947951|ref|ZP_04752378.1| arginine transporter permease subunit ArtQ [Actinobacillus minor
           NM305]
 gi|240297745|gb|EER48204.1| arginine transporter permease subunit ArtQ [Actinobacillus minor
           NM305]
          Length = 223

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L            + + S ++G++LS+    L         K      +   L+ 
Sbjct: 1   MFTEYLPLIYSATLMTLGLALASLIVGLLLSILFVSLETSKLSVISKPTT---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +          G       F    +ALS   AA+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIYFGSTELIEK----LTGEYIEFSAFNCGVLALSLIFAAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPVGQWESGTALGLSRGYTFIHIIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQSELINTNEHQPFTWFGLAALIYLAITLVSQVIIRYLELRFTRFER 220


>gi|222152718|ref|YP_002561894.1| amino acid ABC transporter permease [Streptococcus uberis 0140J]
 gi|222113530|emb|CAR41316.1| putative amino acid ABC transporter, permease protein
           [Streptococcus uberis 0140J]
          Length = 233

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 11/189 (5%)

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +    +S   H KT KA+  +Y+   L    P LV     Y         G      G 
Sbjct: 47  GILFGAMSTSKH-KTLKAIARVYVE--LYQNTPLLVQFVFVYY--------GLAIISNGL 95

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + +  Y  A+IAE++RSG+ AVP+GQ+EAA++ G T+ +   L++LPQA+
Sbjct: 96  IMISTFFTAVLCVGIYHGAYIAEVIRSGIEAVPKGQIEAALSQGFTYEQTMSLIVLPQAV 155

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+I+PP+T+Q +NL+KN+S+   +  AD++        +T   +        +Y  L   
Sbjct: 156 RTILPPMTNQVVNLIKNTSVVAIISGADIMFTAKAWAYETTNYVPAFAGAAILYFILCYP 215

Query: 381 IALFMNRLN 389
           +A +  R  
Sbjct: 216 LANWARRKE 224



 Score = 43.0 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 39/69 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+    +  F+ T  ++F  ++ A ++G L GA   S +K +  I RVYVE+++N P LV
Sbjct: 20  SHFDLFIKAFLYTLGMSFLALLLALVLGILFGAMSTSKHKTLKAIARVYVELYQNTPLLV 79

Query: 144 VIFFLYKSV 152
              F+Y  +
Sbjct: 80  QFVFVYYGL 88


>gi|47568092|ref|ZP_00238797.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
 gi|47555246|gb|EAL13592.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
          Length = 177

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/181 (30%), Positives = 102/181 (56%), Gaps = 8/181 (4%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +      L ++   ++  +  + L+ + +  +F  PV+              F++  + 
Sbjct: 1   MRIAPIRILNWLGAAIVEFVRNIPLVLIAFIFYFALPVI--------GITLNGFVAGTVT 52

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ YTAAFIAE++R+G+++V +GQMEAA + GLT+ +    ++LPQAM+ +IPPL +Q+L
Sbjct: 53  LTVYTAAFIAEVIRAGILSVAKGQMEAARSSGLTYVQGMYYIVLPQAMKIVIPPLGNQFL 112

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NL+KNSS+   +   DL+  G  I  +T    ++ +     YL L+I +++ +  L  ++
Sbjct: 113 NLVKNSSILGIIAGMDLMYQGDLISTKTFVTFDVYIFVGMFYLILTIPLSMLVRYLEKRL 172

Query: 393 A 393
           A
Sbjct: 173 A 173


>gi|317407536|gb|EFV87487.1| hypothetical protein HMPREF0005_05080 [Achromobacter xylosoxidans
           C54]
          Length = 200

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 97/195 (49%)

Query: 17  KFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGI 76
           +  +D R  ++  Q+++A        W   N + N+ +  +++G  +L E A F I + +
Sbjct: 4   RLWFDGRARSVLAQLLIAGAFVGGVGWLAWNAHANLTQRGIAMGFDYLGEAARFPIAESL 63

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y    SY  A LVG VNT +++   +  +T++G  +   R S + LV  +  VY+E  
Sbjct: 64  LAYQPTDSYGRAFLVGLVNTLYISALVIAASTLLGFGLALARRSRHPLVTGVATVYLEAV 123

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN P +V + F Y  V   LP    ++    G+FL+ RGL FP+L++  +     ++   
Sbjct: 124 RNTPLVVQLLFWYSLVTINLPPARQALQPLPGVFLSVRGLFFPSLSLQGDTGPLWWALGA 183

Query: 197 GIVLSLFATRLSRHF 211
             +L   A RL+R  
Sbjct: 184 AALLLWGAWRLARRS 198


>gi|209809241|ref|YP_002264779.1| binding-protein-dependent transport system inner membrane component
           [Aliivibrio salmonicida LFI1238]
 gi|208010803|emb|CAQ81200.1| binding-protein-dependent transport system inner membrane component
           [Aliivibrio salmonicida LFI1238]
          Length = 264

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 19/244 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +PD       G +     +    +T+  +    + +F++ ++ +L      
Sbjct: 36  MNYQWQWDRVPDFLFFYEDGEWFPAELIEGLLVTLQISGLSAIATFLIALITALL----- 90

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G++L   YI   LI   P LV I L Y +      L +F+            +
Sbjct: 91  RLSDSVVGRSLAKGYIE--LIRNTPLLVQIYLLYFVFGPYLGLERFS------------T 136

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AEI+RSGL+ +P+GQ EA  +LGL+   + R ++LPQ ++  +P LT
Sbjct: 137 AILALALFQGAYTAEILRSGLVNLPKGQFEACRSLGLSSFNSYRYIILPQVIQKTLPSLT 196

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+  T    EI      IYL +++ ++     L
Sbjct: 197 NELVSLVKNSSIVSVMAIFDLTTEGRNIVADTAMPFEIWFSVAAIYLLVTLSLSGLSAWL 256

Query: 389 NAKI 392
             K+
Sbjct: 257 EHKM 260



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 31/64 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  ++    I   +I  +    RLS + +   + + Y+E+ RN P LV I+ L
Sbjct: 62  LIEGLLVTLQISGLSAIATFLIALITALLRLSDSVVGRSLAKGYIELIRNTPLLVQIYLL 121

Query: 149 YKSV 152
           Y   
Sbjct: 122 YFVF 125


>gi|167915708|ref|ZP_02502799.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 112]
          Length = 320

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGS 260
           L     S          + L      ++  L    L  L   +    P     F  +  +
Sbjct: 102 LARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFAEVATT 161

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAM
Sbjct: 162 DLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 381 IALFMNRLNAKIALKEKK 398
           +++   ++  + A    +
Sbjct: 282 LSIVQAQVERRYARGAVR 299


>gi|326692921|ref|ZP_08229926.1| ABC-type amino acid transport system, permease component
           [Leuconostoc argentinum KCTC 3773]
          Length = 214

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 31/213 (14%)

Query: 187 AKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               V S +LG V ++         R   + + +  + +PLL I+ F    +   V    
Sbjct: 24  VIALVGSLILGTVFAVMQVMPQAWVRRIGNIYVQVFRNIPLLVITFFFFLVVSQYV---- 79

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                                    F+S  +AL  YT+AFIAE VR+G++AV  GQME A
Sbjct: 80  ---------------------KMSGFVSGTVALMLYTSAFIAETVRAGILAVNGGQMEGA 118

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A GL+  +A R ++LPQA R  +P L +Q++NL+KNSS+   VG  DL+  G  I   T
Sbjct: 119 RANGLSFAQAMRHIVLPQAFRVALPSLGNQFINLVKNSSILAFVGGLDLMYQGNMIAANT 178

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +     +I   +YL +++ ++ +M  L  K+ 
Sbjct: 179 FETFGTYIIVGILYLIITLPLSYYMQHLERKLK 211



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 37/70 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF  T   +   ++ + I+GT+    ++     V  I  +YV+VFRNIP LV+ FF 
Sbjct: 12  LMQGFGYTLLSSVIALVGSLILGTVFAVMQVMPQAWVRRIGNIYVQVFRNIPLLVITFFF 71

Query: 149 YKSVLSVLPI 158
           +  V   + +
Sbjct: 72  FLVVSQYVKM 81


>gi|258621543|ref|ZP_05716576.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262171611|ref|ZP_06039289.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|258586161|gb|EEW10877.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|261892687|gb|EEY38673.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
          Length = 365

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 123 WIWLVFVNIYPFFAAILLYGGLFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 182

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 183 RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSEGSEINKLLR 232

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 233 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 292

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 293 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYS 352

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 353 IWLEGKLHTGHKR 365



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 76/199 (38%), Gaps = 7/199 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P L+ + F+ 
Sbjct: 155 WGGLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVP-LITVLFMA 213

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLFA 204
             +L +       I       +     S   +       +             + LS + 
Sbjct: 214 SVMLPLFLSEGSEINKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWK 273

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVS 263
                   +     +P +  +   +F   +LVLI   +  L   +      N++G +T S
Sbjct: 274 KMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATES 333

Query: 264 PEFMSLYIALSCYTAAFIA 282
             F++L   + C+  +  +
Sbjct: 334 YVFVALVFWIFCFGMSRYS 352


>gi|319942068|ref|ZP_08016387.1| hypothetical protein HMPREF9464_01606 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804452|gb|EFW01330.1| hypothetical protein HMPREF9464_01606 [Sutterella wadsworthensis
           3_1_45B]
          Length = 292

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 18/236 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
             D+     F      R      LT+  +A   V S +LGI+ +      ++       +
Sbjct: 72  QIDYRPDFSFLPDFRIRIWDGFLLTIGVSAAAMVLSLLLGILSA-----AAKLSRVLLLR 126

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            L  LY+    I G P ++ I L + L                 V   F +  I LS + 
Sbjct: 127 DLSSLYVVF--IRGTPLIMQIYLFFYL-----------VGTAWGVDDRFWAGVIILSVFE 173

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+I+EI+R   +++   Q+E+A A+G T  +  R V++PQ     +P L  Q+ +++K+
Sbjct: 174 GAYISEIIRGSYLSIDPAQIESAKAVGFTRLQQLRFVIVPQMAARTLPALAGQFASVIKD 233

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           SSL   +   +L      +     + +E  L    +YL L++ +AL    L  +  
Sbjct: 234 SSLLSMISVVELTQAMREVSAVNLKLVECYLFLGVLYLILTLPVALVSRLLEKRFR 289



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 77  VPYTSDSSYATAI----LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           + Y  D S+          GF+ T  ++ + M+ + ++G L  A +LS   L+  +  +Y
Sbjct: 73  IDYRPDFSFLPDFRIRIWDGFLLTIGVSAAAMVLSLLLGILSAAAKLSRVLLLRDLSSLY 132

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           V   R  P ++ I+  +  V +   + D   
Sbjct: 133 VVFIRGTPLIMQIYLFFYLVGTAWGVDDRFW 163


>gi|260596108|ref|YP_003208679.1| Inner membrane amino-acid ABC transporter permease yhdY
           [Cronobacter turicensis z3032]
 gi|260215285|emb|CBA27215.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Cronobacter turicensis z3032]
          Length = 365

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 132/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P+        A+++G ++         I       L   GR  
Sbjct: 75  WVFIHARFG-QFMYGLYPHDERWRINLALIIGLLS---------IAPMFWHALPRRGR-- 122

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +    P+VV + LY   L +  +                     T
Sbjct: 123 -----------YIACWAVAYPVVVWWLLYGGFLGLERVETRQ-------------WGGLT 158

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 159 LTLIIASVGIAGALPLGILLAL-----GRRSGMPVVRVLSVIFIEFWRGVPLITVLFMS- 212

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 213 ---------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 263

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 264 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 323

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 324 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFHTGR 362


>gi|229592162|ref|YP_002874281.1| putative histidine transporter permease [Pseudomonas fluorescens
           SBW25]
 gi|229364028|emb|CAY51591.1| putative histidine transport system permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 229

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P   +    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPMLGYDDYIDLNP-LAAGIGTLGFIFGAYLSETFRGAFMAIPKGQAEAGL 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++  +    V++PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSSFQVFFRVMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRSLEKRYSVGVR 225



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     +L      +     + LN 
Sbjct: 65  ILLIFYGGQDLLNRVAPMLGYDDYIDLNP 93


>gi|157363347|ref|YP_001470114.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157313951|gb|ABV33050.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 239

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 20/252 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +       + +     +       +      ++   +TM  +    + SF +GIV +L
Sbjct: 7   IAMTAGVMIAIYLAISRVYPFDWTVVLKYRRVFINGLVMTMSLSGFSLLISFAVGIVFAL 66

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                         +   +LY+  F     P LV+I L Y              +G    
Sbjct: 67  M------RRSSGIFREFAILYVFFF--RNTPLLVVILLTYY------------GLGSIIP 106

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  + LS +  A+IAEIVRSGL AV +G++EAA +LGLT  +    V  PQA+R 
Sbjct: 107 FDRFWAAVMGLSAFEGAYIAEIVRSGLDAVDKGELEAAFSLGLTKSEVFFYVHFPQAIRI 166

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L  Q ++L+K+SSLA  +  A+L   G  +  QT  + E  L     Y++++ +++
Sbjct: 167 SLPALIGQSISLVKDSSLASVIALAELTMTGRQVGTQTLASFESYLTIAVFYVAVTSILS 226

Query: 383 LFMNRLNAKIAL 394
           L  + L  ++A+
Sbjct: 227 LIGHWLERRLAI 238



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G V T  L+   ++ +  +G +    R S+  +      +YV  FRN P LVV
Sbjct: 35  YRRVFINGLVMTMSLSGFSLLISFAVGIVFALMRRSSG-IFREFAILYVFFFRNTPLLVV 93

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I   Y  + S++P       +          +
Sbjct: 94  ILLTYYGLGSIIPFDRFWAAVMGLSAFEGAYI 125


>gi|317403436|gb|EFV83948.1| hypothetical protein HMPREF0005_01969 [Achromobacter xylosoxidans
           C54]
          Length = 217

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 18/220 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+       V S +LG+V +L     +++          L   S  +I  L  +
Sbjct: 16  LEGAKLTILVTLGSLVLSTLLGLVWALMRVSGNKY----------LSRFSAGVINLLRGI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I L + ++F  P +                +  I L    +A+ AE  R+G+ A+ RG
Sbjct: 66  PIIVLLFYIYFVMPDM--------GIALTAVQAAIIGLGIAYSAYQAENFRAGIEAIDRG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA+A+G++     R V+LPQA++ ++PP  +  + +LK+SS A  +  A+L   G  
Sbjct: 118 QIEAAMAMGMSWSMTMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELALQGKL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I   T +   +  +   +YL + + + L +  L  + A K
Sbjct: 178 IAVSTFKNATVFSLVALMYLVMCVPLILLVRHLEKRSAAK 217



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 42/110 (38%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   + Y   +L G   T  +    ++ +T++G +    R+S NK ++      + + R 
Sbjct: 5   FKDAAEYLPILLEGAKLTILVTLGSLVLSTLLGLVWALMRVSGNKYLSRFSAGVINLLRG 64

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           IP +V++F++Y  +  +            G+ +               A 
Sbjct: 65  IPIIVLLFYIYFVMPDMGIALTAVQAAIIGLGIAYSAYQAENFRAGIEAI 114


>gi|238798540|ref|ZP_04642018.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
 gi|238717627|gb|EEQ09465.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
          Length = 220

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 18/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +     T        V  F +G+V+ L  +  SR      G+    +YIS F   
Sbjct: 12  WLPMLIDGAVTTASLCVVAIVAGFFIGVVIYLMESGRSRL-----GRGFARVYISLF--R 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L  + L + L  +                P +++  +AL+  TAA+ ++I+RSG  
Sbjct: 65  GTPVLAQVLLCFYLPGEL-----------GLSLPGYLAAVLALTLNTAAYQSQILRSGFE 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EAA   GL+ R+    + +PQ +R  +P L S+ ++++K S++   +   DL+
Sbjct: 114 AIPPGQLEAAAMCGLSSRQTLWHIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            VG  + + T + +E+ +     YL L+ ++AL    +  +   + +
Sbjct: 174 RVGQQLASATYRPLEVYVAIALSYLVLTSLLALLGGYVERRWHKESR 220



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 30/72 (41%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   +++   ++ G V T  L    ++    IG ++       ++L     RVY+ +FR 
Sbjct: 6   FQLLTAWLPMLIDGAVTTASLCVVAIVAGFFIGVVIYLMESGRSRLGRGFARVYISLFRG 65

Query: 139 IPPLVVIFFLYK 150
            P L  +   + 
Sbjct: 66  TPVLAQVLLCFY 77


>gi|188590526|ref|YP_001920426.1| L-cystine transport system permease protein TcyB [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188500807|gb|ACD53943.1| L-cystine transport system permease protein TcyB [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 213

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 101/208 (48%), Gaps = 15/208 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++FV + +L I L +    L+R       + L  +Y+   ++ G P L+ I + +  
Sbjct: 17  VTLEVFVLTLILSIPLGIVV-ALARTSKFLVLRKLTGIYV--LIMRGTPLLLQIVVIF-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F +  +A     AA+  EI R+G+I++ +GQ EAA  LG
Sbjct: 72  ---------FGLPTMGITFDRFTAAILAFVLNYAAYFGEIFRAGIISIDKGQYEAAEMLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT++     ++LPQA++ +IPP+ ++   L+K++SL   +G  +L+ +     N+    I
Sbjct: 123 LTYKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIAKIASNRDVTLI 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +++   +YL +  +++  + ++  K 
Sbjct: 183 P-LILAGVVYLVVIGILSKLLEKVENKY 209



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    +I +  +G +V   R S   ++  +  +YV + R  P L+ I  +
Sbjct: 11  ILEGLKVTLEVFVLTLILSIPLGIVVALARTSKFLVLRKLTGIYVLIMRGTPLLLQIVVI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + ++    D          LN 
Sbjct: 71  FFGLPTMGITFDRFTAAILAFVLNY 95


>gi|330812509|ref|YP_004356971.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380617|gb|AEA71967.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 216

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +      +     + + +F+ G V+ L    L R       + +   YI  F  
Sbjct: 4   FTFWDVVRNLLTGLQWTLALSLVAFIGGGVIGLLIMVL-RISKSALPRNIARTYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           +M+  IAL+ +T+A++AEI R  +
Sbjct: 61  QGTPLLMQLFLVF-----------FGVALAGVEISPWMAAAIALTLFTSAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++  GQ EA+ +L L   +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 110 DSISHGQWEASASLALNPLEQLRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              GG + N T +   +  +    Y  L   ++L    L  ++
Sbjct: 170 TKTGGMLANATFEPFMVYGLVALGYFLLCYPLSLSARYLERRL 212



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  L+    I   +IG L+   R+S + L   I R Y+E+F+  P L+ +F
Sbjct: 11  RNLLTGLQWTLALSLVAFIGGGVIGLLIMVLRISKSALPRNIARTYIELFQGTPLLMQLF 70

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            ++  V          +     + L              ++  
Sbjct: 71  LVFFGVALAGVEISPWMAAAIALTLFTSAYLAEIWRGCVDSIS 113


>gi|54309893|ref|YP_130913.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium profundum SS9]
 gi|46914332|emb|CAG21111.1| putative ABC-type arginine/histidine transport system, permease
           component [Photobacterium profundum SS9]
          Length = 225

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 91/219 (41%), Gaps = 9/219 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                       T   +   + V+G+++++    ++R+            YI  F   G 
Sbjct: 7   FESWELYLDGFITTVWMVAVALVIGLIIAIPVG-IARNSKNPMIYFPAWAYIYFF--RGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + L Y        L Q   + G+     +          TAA+ +EI+R  + ++
Sbjct: 64  PLLIQLYLVYY------GLSQLIEVQGTVWQDAWFCALFVFILNTAAYTSEIIRGAINSL 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G++EAA A G++   A R ++LP AMR  +P  +++ + ++  S++A  V   DL   
Sbjct: 118 PKGEIEAAKAYGMSTPLAFRRIILPSAMRRALPAYSNEVIFMVHGSAVAGIVTIVDLTGA 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              + ++     E  L     Y+ L+  I     +L   
Sbjct: 178 ARIVNSRYYAPFESYLFAGMCYMVLTFTIIWGFKKLEQH 216



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 34/78 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L GF+ T W+    ++   II   VG  R S N ++ +    Y+  FR  P L+ +
Sbjct: 10  WELYLDGFITTVWMVAVALVIGLIIAIPVGIARNSKNPMIYFPAWAYIYFFRGTPLLIQL 69

Query: 146 FFLYKSVLSVLPIPDHSI 163
           + +Y  +  ++ +     
Sbjct: 70  YLVYYGLSQLIEVQGTVW 87


>gi|298489316|ref|ZP_07007331.1| Arginine ABC transporter, permease protein ArtQ [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298156167|gb|EFH97272.1| Arginine ABC transporter, permease protein ArtQ [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 231

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F         F +  
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMHALGKLFDIPDLALSAFSAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++    M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVLAMAGMYFLEK 220

Query: 391 KIALK 395
           + +  
Sbjct: 221 RASRG 225


>gi|85704884|ref|ZP_01035985.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. 217]
 gi|85670702|gb|EAQ25562.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. 217]
          Length = 239

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 3/233 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    + +        +    +     + + ++V+ +V+      + R    K    +  
Sbjct: 2   NYNWNWSVLWEPEYFGWLLSGLGWTVSVALCAWVIAMVVGSLVG-VGRTLPNKVVSTVCT 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F    +P LV + + Y    +        ++      PEF++  +AL  YTA+ +
Sbjct: 61  AYVELF--RNVPLLVQMFIWYFAVPEMLPEDAGRWMKREMPQPEFVTAVVALGLYTASRV 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VR+G+ AVP G   AA A G+   +  R VLLP + R I+PP+TS++L + KNSSLA
Sbjct: 119 AEQVRAGIEAVPTGLKSAATAQGMRVSQVYRYVLLPISFRLIVPPMTSEFLTVFKNSSLA 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +G  +L +    I   T Q+ E       IY+ +++   + M  L     +
Sbjct: 179 LTIGLLELTAQSQQIAEYTFQSFEAYTAATIIYVLIALCATIVMTVLERYTRI 231



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  +A    + A ++G+LVG GR   NK+V+ +C  YVE+FRN+P LV 
Sbjct: 15  YFGWLLSGLGWTVSVALCAWVIAMVVGSLVGVGRTLPNKVVSTVCTAYVELFRNVPLLVQ 74

Query: 145 IFFLYKSVLSVLPI 158
           +F  Y +V  +LP 
Sbjct: 75  MFIWYFAVPEMLPE 88


>gi|238784129|ref|ZP_04628143.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
 gi|238714975|gb|EEQ06973.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
          Length = 219

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 108/227 (47%), Gaps = 18/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +     T        V  F +G+V+ L  +  SR      G+    +YIS F   
Sbjct: 11  WLPMLIDGALTTASLCVVAIVAGFFIGVVIYLMESGRSR-----FGRGFAQVYISLF--R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L  + L + L  +                P +++  +AL+  TAA+ ++I+RSG  
Sbjct: 64  GTPVLAQVLLCFYLPGEL-----------GVSLPGYLAAVLALTLNTAAYQSQILRSGFA 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ+EAA   GL+ R+    + +PQ +R  +P L S+ ++++K S++   +   DL+
Sbjct: 113 AIPPGQLEAAAMCGLSPRQTLWYIQIPQVLRLTLPSLISELIDVIKASAVVSVIAITDLM 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            VG  + + T + +E+ +    +YL L+ ++AL  + +  +   + +
Sbjct: 173 RVGQQLASATYRPLEVYVAIALMYLVLTSLLALLGSYVERRWHKETR 219



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 29/72 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   +++   ++ G + T  L    ++    IG ++       ++      +VY+ +FR 
Sbjct: 5   FQRLTAWLPMLIDGALTTASLCVVAIVAGFFIGVVIYLMESGRSRFGRGFAQVYISLFRG 64

Query: 139 IPPLVVIFFLYK 150
            P L  +   + 
Sbjct: 65  TPVLAQVLLCFY 76


>gi|325271439|ref|ZP_08137964.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324103421|gb|EGC00743.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 232

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L      +    K+   S   G++ ++    L R   +        LY 
Sbjct: 1   MIFDYNVIWEALPMYFGGLLNTLKLLAISLFFGLLGAIPLG-LMRVSRQPVVNFTAWLY- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAF 280
            T++I G P LV + L Y        L QF  +  S   P          +A    T+A+
Sbjct: 59  -TYVIRGTPMLVQLFLIYY------GLAQFEAVRDSVFWPLLSSATFCACLAFGINTSAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +SL
Sbjct: 112 TAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 172 ASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAERR 222



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 39/119 (32%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  Y            G +NT  L    +    +    +G  R+S   +V +   +Y  V
Sbjct: 2   IFDYNVIWEALPMYFGGLLNTLKLLAISLFFGLLGAIPLGLMRVSRQPVVNFTAWLYTYV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            R  P LV +F +Y  +     + D               L+F   T    A+I   S 
Sbjct: 62  IRGTPMLVQLFLIYYGLAQFEAVRDSVFWPLLSSATFCACLAFGINTSAYTAEIIAGSL 120


>gi|296390282|ref|ZP_06879757.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
          Length = 248

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 5/225 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   L +    +     I +  +++ + L      + R    +    L   Y+  F    
Sbjct: 18  SETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVM-RTVPNRLVSGLATAYVEIF--RN 74

Query: 232 LPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           +P LV + + Y L  D     L  +     +  +  ++S+ + L  +TAA + E VR+G+
Sbjct: 75  VPLLVQLFIWYFLVPDLLPEGLQTWFKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGI 134

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ  AA A+G    +  R VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L
Sbjct: 135 QALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMEL 194

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++        +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 195 LAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIMRLVERKVAV 239



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A  G I A  +G+L+G  R   N+LV+ +   YVE+FRN+P 
Sbjct: 18  SETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGLATAYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP    +     
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQTWFKQD 103


>gi|260566498|ref|ZP_05836968.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|297248903|ref|ZP_06932617.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|260156016|gb|EEW91096.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|297174267|gb|EFH33618.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
          Length = 277

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 5/222 (2%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 +    K+   S V+G +LSL  T  +R  + +  ++L   Y+  F   G P L 
Sbjct: 61  PRYWSGLLITLKLVAISIVIGALLSLPITA-ARMSNSRWLRSLAFGYVYFF--RGTPLLA 117

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              L Y   F        +          +    +A S  TAA+ AEI+R  + +V  GQ
Sbjct: 118 QTFLIYY-GFGTFRPFLESIGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIESVAVGQ 176

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E A ALG++ R     V+LPQA+   + P  ++ + ++K S++   +   DL+      
Sbjct: 177 WEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRA 236

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++T    +  L    IYL +  ++    + L  ++    K+
Sbjct: 237 YSRTFD-FQTYLWAAVIYLLMVEILRHIWDALERRLTRHLKR 277



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      G + T  L    ++   ++   + A R+S ++ +  +   YV  FR  P L
Sbjct: 57  ETYGPRYWSGLLITLKLVAISIVIGALLSLPITAARMSNSRWLRSLAFGYVYFFRGTPLL 116

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
              F +Y    +  P  +   +  F     N
Sbjct: 117 AQTFLIYYGFGTFRPFLESIGLWVFFRDAWN 147


>gi|251780837|ref|ZP_04823757.1| L-cystine transport system permease protein TcyB [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243085152|gb|EES51042.1| L-cystine transport system permease protein TcyB [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 213

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 15/208 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++FV + +L I L +    L+R       + L  +Y+   ++ G P L+ I + +  
Sbjct: 17  VTLEVFVLTLILSIPLGIVV-ALARTSKFLVLRKLTGIYV--LIMRGTPLLLQIVVIF-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F +  +A     AA+  EI RSG+I++ +GQ EAA  LG
Sbjct: 72  ---------FGLPTMGITFDRFTAAILAFVLNYAAYFGEIFRSGIISIDKGQYEAAEMLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT +     ++LPQA++ +IPP+ ++   L+K++SL   +G  +L+ +     N+    I
Sbjct: 123 LTSKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYIIGLDELLKIAKIASNRDVTLI 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +++   +YL +  +++  + ++  K 
Sbjct: 183 P-LILAGAVYLVVIGILSKLLEKVEKKY 209



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    +I +  +G +V   R S   ++  +  +YV + R  P L+ I  +
Sbjct: 11  ILEGLKVTLEVFVLTLILSIPLGIVVALARTSKFLVLRKLTGIYVLIMRGTPLLLQIVVI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + ++    D          LN 
Sbjct: 71  FFGLPTMGITFDRFTAAILAFVLNY 95


>gi|206576764|ref|YP_002238287.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935273|ref|YP_003439332.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290509327|ref|ZP_06548698.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|206565822|gb|ACI07598.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288889982|gb|ADC58300.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289778721|gb|EFD86718.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 308

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SV   P     +    F +   L     T+       V S + G +L+L     S     
Sbjct: 34  SVAFNPRWEWGVFARWFFDPVILEGLGQTLLLTLLGTVLSVIFGGLLALARLSSSWLLSS 93

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--------E 265
                +       +L   LP +V++ + Y   +    L       G T +         +
Sbjct: 94  LAWGYI-------WLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQ 146

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+P
Sbjct: 147 FSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILP 206

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++ ++L K +++   +   +L      I N+T + I ++++    YL+++ +++   
Sbjct: 207 SGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAIQ 266

Query: 386 NRLNAKIALKEKK 398
             +   +A  E++
Sbjct: 267 YLVERALARSERR 279


>gi|188527761|ref|YP_001910448.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           Shi470]
 gi|188144001|gb|ACD48418.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           Shi470]
          Length = 240

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 44  PLAIISFILGLFIAVFVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTVAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|86359544|ref|YP_471436.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
 gi|86283646|gb|ABC92709.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 272

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 2/196 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R    F+ +  + +P+L +  ++ F           Y       V            
Sbjct: 79  IVLRQIARFYIEIIRGIPMLVLLFYVAFVGA--PGFVASYNFVITPLVKSGVAEPILVRD 136

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                   IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R 
Sbjct: 137 LSLMWRAIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRV 196

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I PPL++ +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++
Sbjct: 197 IFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLS 256

Query: 383 LFMNRLNAKIALKEKK 398
           LF+ R+  K+    ++
Sbjct: 257 LFLRRIEKKMKQMPRR 272


>gi|148378448|ref|YP_001252989.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931220|ref|YP_001382837.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153935969|ref|YP_001386404.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. Hall]
 gi|148287932|emb|CAL81998.1| binding-protein-dependent transport system,membrane component
           [Clostridium botulinum A str. ATCC 3502]
 gi|152927264|gb|ABS32764.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152931883|gb|ABS37382.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. Hall]
          Length = 211

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 19/224 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    L    ++        +FS  LGI+++     + ++   K  K +  L   T++ 
Sbjct: 6   DITIFILKGSIISFKLFIVTIIFSIPLGILIA-----MGKNSKIKPLKII--LSAYTWIF 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ +   Y   F  PV+       G  + P   + Y+       A++AE  R+G+
Sbjct: 59  RGTPLMLQLFFAY---FGLPVI-------GIRLEP-LTAAYLTFIINYGAYLAETFRAGI 107

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++  GQ+EAA  LG T+ +    +++PQA+R++IPP+ ++ +NL+K+S+L  A+G  D+
Sbjct: 108 ESIDEGQVEAAKVLGFTYNQTMFKIIVPQAIRNVIPPICNESINLIKDSALVAAIGIGDM 167

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     ++ +    I    I   IYL ++  + L    L  K A
Sbjct: 168 LRAAKEVVTRDF-TITPFFIAAAIYLLITAFLVLIFRTLEKKYA 210



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G + +F L    +I +  +G L+  G+ S  K +  I   Y  +FR  P ++ +FF 
Sbjct: 11  ILKGSIISFKLFIVTIIFSIPLGILIAMGKNSKIKPLKIILSAYTWIFRGTPLMLQLFFA 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +    +          +N 
Sbjct: 71  YFGLPVIGIRLEPLTAAYLTFIINY 95


>gi|161525881|ref|YP_001580893.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|160343310|gb|ABX16396.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
          Length = 226

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 6/232 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  F        L           KI + + V+GIV       L R    K        
Sbjct: 1   MMHQFDWSSIPGALPTLWTGAIVTFKITLIAIVVGIVWGTLL-ALMRLSGVKPLAWFAKA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++ F       LV++ L + L    P + Q       T+     S  +A S + AA+ +
Sbjct: 60  YVTVFRSIP---LVMVLLWFFL--IVPQVLQGVLGLSPTIDIRLASAMVAFSLFEAAYYS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL  
Sbjct: 115 EIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  AD       I ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 VISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSVASALVKGLQKKVTR 226



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 17  LWTGAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWF 76

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 77  FLIVPQV 83


>gi|150396798|ref|YP_001327265.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150028313|gb|ABR60430.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 267

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A + V +  +G+V+  F   L++   EK+ +    +Y + F       L L  + Y L
Sbjct: 55  VTASLAVATLPVGLVIGFFI-ALAKQSEEKSLRLAANIYTTIFRGL-PELLTLFIVYYGL 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G+     F++  IAL    +A+ +E++ S   A+P GQ EA  ALG
Sbjct: 113 QILVQQFLATVGYDGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDALG 172

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   K  RL++LPQ +R  +P L + ++ LLK+++L   +G  D++   G     T  A 
Sbjct: 173 LHRGKTMRLIILPQLIRVALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHAF 232

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E   +   ++L L+++ ++  + L       E +
Sbjct: 233 EFFGVACVLFLVLAMISSIVFSALERSTKRAETR 266



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 8/156 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  GF+ T  LA + +    +IG  +   + S  K +     +Y  +FR +P L+ 
Sbjct: 45  WGDEIAYGFLVTASLAVATLPVGLVIGFFIALAKQSEEKSLRLAANIYTTIFRGLPELLT 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  +  ++     ++     + +N              A   VFS     VL L A
Sbjct: 105 LFIVYYGLQILVQQFLATVGYDGAVEIN-------AFVAGMIALGVVFSAYCSEVL-LSA 156

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            +   H   + G AL L    T  +  LP L+ +AL
Sbjct: 157 FKAIPHGQYEAGDALGLHRGKTMRLIILPQLIRVAL 192


>gi|107021748|ref|YP_620075.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|170731991|ref|YP_001763938.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|105891937|gb|ABF75102.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Burkholderia cenocepacia
           AU 1054]
 gi|169815233|gb|ACA89816.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 225

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGALPTLWSGAVVTFKITLIAIVIGIVWGTLL-ALLRLSGVKPLAWFAKAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       + ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWSGAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  +
Sbjct: 76  FLIVPQL 82


>gi|282891083|ref|ZP_06299588.1| hypothetical protein pah_c045o107 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499076|gb|EFB41390.1| hypothetical protein pah_c045o107 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 147

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 71/127 (55%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F++   AL   + A+I+EIVR G+ A+P GQ EAA  +GL   +  + ++LPQ +R  +
Sbjct: 18  PFVAGVTALGINSTAYISEIVRGGINAIPEGQWEAAHVIGLKPWQTLKGIILPQMLRITL 77

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P LT++   L+K +S+ + +G A+L  V   I+ +    + I L    +YL ++  +++ 
Sbjct: 78  PSLTNELTALIKETSILMVIGVAELTKVSKDIVTRELDPMTIYLTAACLYLVMTSSVSIL 137

Query: 385 MNRLNAK 391
              +  +
Sbjct: 138 AQFIQKR 144


>gi|271499710|ref|YP_003332735.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343265|gb|ACZ76030.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 224

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    +I + + V+GIV       + R    K       LY
Sbjct: 1   MYNFDWSSIPPSLPYLIKGMGVTLEITLTAVVVGIVWGTVL-AVMRLSPVKPISWFAKLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--IVPSLLQNVLGLSPKTDIRLVSAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQASAALALGMTHWQSMQLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL   F+Y  +S+  ++ +N L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASMLVNYLKRR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 42/78 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G   T  +  + ++   + GT++   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIPPSLPYLIKGMGVTLEITLTAVVVGIVWGTVLAVMRLSPVKPISWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLIVPSL 82


>gi|328471236|gb|EGF42138.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 223

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    PV+   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQIFPVMVGID---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRSQMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 35/71 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLVFSLILAVILANIRVFKLPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  + P+ 
Sbjct: 75  YYGLPQIFPVM 85


>gi|146305345|ref|YP_001185810.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145573546|gb|ABP83078.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 215

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 14/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L      +     + + +FV G +  L    L+R       + L   YI  F  
Sbjct: 3   FTLWDILRNLLTGLQWTLLLSLVAFVCGGIAGLLVM-LARLSPLAAPRILARGYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           +++   AL+ +T+AF+AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGIALLGVDVSPWLAAATALTLFTSAFLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ RGQ EA+ +L ++  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESIGRGQWEASESLAMSRLETLRHVVLPQALRIAVAPTVGFSVQVIKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              G  + N T +   +       Y  L   ++L   RL  ++ +
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFLLCYPLSLAAYRLERRLNV 213



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L G   T  L+    +   I G LV   RLS       + R Y+E+F+  P L
Sbjct: 6   WDILRNLLTGLQWTLLLSLVAFVCGGIAGLLVMLARLSPLAAPRILARGYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHS 162
           + +F ++  +  +       
Sbjct: 66  MQLFLVFFGIALLGVDVSPW 85


>gi|92114719|ref|YP_574647.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91797809|gb|ABE59948.1| amino acid ABC transporter membrane protein, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 243

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 10/192 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R        AL +L+IS F   G P LV + L Y   +  P L  F            
Sbjct: 62  IVRVQRTPGLNALAMLFISFF--RGTPLLVQLFLFY---YGLPQLLTF-----LVAINGI 111

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L+ + +A++AE +R+ ++ V R Q EAA+++G+T  +  R ++LPQA R   P 
Sbjct: 112 TATILGLTLHFSAYMAESIRAAIVGVDRSQTEAALSIGMTQGQLMRRIVLPQATRVATPT 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L + +++++K +SLA  +G  +L+         +    E  L+   IY  +  +++    
Sbjct: 172 LMNYFIDMIKATSLAFTLGVTELMGATQKEAAGSFLYFEAFLMVAVIYWVVVELLSWLQR 231

Query: 387 RLNAKIALKEKK 398
           R+  ++    ++
Sbjct: 232 RMEKRLNRAYQR 243


>gi|222832612|gb|EEE71089.1| ABC transporter family protein [Populus trichocarpa]
          Length = 465

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 15/229 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++L   GL+F    +  +  + V + + G++       L R   +K       LY++   
Sbjct: 251 IYLAVTGLNFVLKGLYFSLTLTVIATIGGVLFGTVL-ALMRLSGKKWLDVPATLYVNGMR 309

Query: 229 IFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              L   ++   L   L   +P+  +             +S  I    + AA+ +EI+R+
Sbjct: 310 SVPLVMVILWFFLLMPLIIGRPIGAE-------------VSAIITFIAFEAAYFSEIMRA 356

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ+ A  A+G+T+ +  RLV+LPQA R+++P L +Q + L +++SL  A+G  
Sbjct: 357 GIQSIPRGQVSAGQAMGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAY 416

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           D++          G+ IE  L     Y  L   ++  + RL+ KIA+  
Sbjct: 417 DMLKGFEVAGKNYGRPIESYLAAGVTYFVLCYSLSWAVKRLHKKIAIIR 465



 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 10/211 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   +   L +          + + S V+ +V+      L           L   ++  
Sbjct: 62  FGKNGDITYLDWMLSAWGWTISVSLLSLVIALVVGSLIGTLRTLEGRPWIVRLGNAWVEL 121

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV I + Y            +F+      P F+ + +AL  +T+A IAE VR
Sbjct: 122 F--RNIPLLVHIFMWY--------HVVPSFVPALKSLPGFVLVVLALGFFTSARIAEQVR 171

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ A+PRGQ  A +A+G T  +  R VLLP A R IIPPLTS+ +N+ KNSS+A AV  
Sbjct: 172 SGIQALPRGQRYAGMAMGFTTFQYYRYVLLPMAFRIIIPPLTSETMNVFKNSSVAFAVSV 231

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           A+L         +T + IEI L    +   L
Sbjct: 232 AELTMFAMQAQEETSRGIEIYLAVTGLNFVL 262



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWIC 129
           E+ Q       D +Y   +L  +  T  ++   ++ A ++G+L+G  R L     +  + 
Sbjct: 56  EVGQSCFGKNGDITYLDWMLSAWGWTISVSLLSLVIALVVGSLIGTLRTLEGRPWIVRLG 115

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             +VE+FRNIP LV IF  Y  V S +P
Sbjct: 116 NAWVELFRNIPLLVHIFMWYHVVPSFVP 143



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 2/155 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP--LVVIFF 147
           L G   +  L     I   + GT++   RLS  K +     +YV   R++P   +++ FF
Sbjct: 262 LKGLYFSLTLTVIATIGGVLFGTVLALMRLSGKKWLDVPATLYVNGMRSVPLVMVILWFF 321

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           L   ++   PI      +   +       S        +      S    + ++      
Sbjct: 322 LLMPLIIGRPIGAEVSAIITFIAFEAAYFSEIMRAGIQSIPRGQVSAGQAMGMTYGQNMR 381

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                +     LP+L   T ++F   +LV     Y
Sbjct: 382 LVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAY 416


>gi|15596538|ref|NP_250032.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|107100792|ref|ZP_01364710.1| hypothetical protein PaerPA_01001820 [Pseudomonas aeruginosa PACS2]
 gi|116049293|ref|YP_791904.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218892554|ref|YP_002441423.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254234460|ref|ZP_04927783.1| hypothetical protein PACG_00312 [Pseudomonas aeruginosa C3719]
 gi|254239712|ref|ZP_04933034.1| hypothetical protein PA2G_00336 [Pseudomonas aeruginosa 2192]
 gi|313106332|ref|ZP_07792575.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
 gi|9947281|gb|AAG04730.1|AE004563_7 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|115584514|gb|ABJ10529.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166391|gb|EAZ51902.1| hypothetical protein PACG_00312 [Pseudomonas aeruginosa C3719]
 gi|126193090|gb|EAZ57153.1| hypothetical protein PA2G_00336 [Pseudomonas aeruginosa 2192]
 gi|218772782|emb|CAW28567.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|310879077|gb|EFQ37671.1| LOW QUALITY PROTEIN: putative permease of ABC transporter
           [Pseudomonas aeruginosa 39016]
          Length = 248

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 108/225 (48%), Gaps = 5/225 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   L +    +     I +  +++ + L      + R    +    +   Y+  F    
Sbjct: 18  SETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVM-RTVPNRLVSGIATAYVEIF--RN 74

Query: 232 LPTLVLIALKYQLHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           +P LV + + Y L  D     L  +     +  +  ++S+ + L  +TAA + E VR+G+
Sbjct: 75  VPLLVQLFIWYFLVPDLLPEGLQTWFKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGI 134

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ  AA A+G    +  R VLLPQA R IIPPLTS++LN+ KNSS+A  +G  +L
Sbjct: 135 QALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVASLIGLMEL 194

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++        +    E   +   IY +L++ + L M  +  K+A+
Sbjct: 195 LAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIMRLVERKVAV 239



 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 42/86 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y    + G   T  +A  G I A  +G+L+G  R   N+LV+ I   YVE+FRN+P 
Sbjct: 18  SETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATAYVEIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           LV +F  Y  V  +LP    +     
Sbjct: 78  LVQLFIWYFLVPDLLPEGLQTWFKQD 103


>gi|291458315|ref|ZP_06597705.1| ABC transporter, permease protein, polar amino acid uptake family
           [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418848|gb|EFE92567.1| ABC transporter, permease protein, polar amino acid uptake family
           [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 262

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                FS +LG+++++ A       + +     P        + G P +  +   Y    
Sbjct: 68  LIAAFFSLLLGMIIAVIA-------YYRLPLLYPAARAFVSFMRGTPIVAQLYFFYFGVA 120

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L                ++ + LS    AF++E +R+ L++V  GQ EAA++LG++
Sbjct: 121 VYSAL--------VRDMTPVTAVSLVLSLNVGAFMSESIRAALLSVDDGQREAALSLGMS 172

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R +++PQA+R  +PPL + ++NL+K SSLA  +G  D++    T  ++T +  EI
Sbjct: 173 NLQIVRRIIIPQALRVALPPLFNDFINLIKASSLAFMLGVPDIMGAARTEGSRTYRYFEI 232

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
               M +Y  +          L  + A
Sbjct: 233 YGAVMVVYWVVITAFDFLRKLLEKRCA 259


>gi|257077631|ref|ZP_05571992.1| amino acid ABC transporter [Enterococcus faecalis JH1]
 gi|256985661|gb|EEU72963.1| amino acid ABC transporter [Enterococcus faecalis JH1]
          Length = 149

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 89/155 (57%), Gaps = 7/155 (4%)

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           + L + ++F  P +  FN        P F++  I L+   +A+I+EIVR G+ AVP GQM
Sbjct: 1   MVLAFFIYFGLPGVLGFNI-------PVFIAGIITLTLNASAYISEIVRGGIKAVPVGQM 53

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA+ +LGL++ +  + ++LPQA+R +IP   +Q++  LK++++  A+G  +L+  G  I+
Sbjct: 54  EASRSLGLSYNRTMQKIILPQAIRIMIPSFINQFVISLKDTTILSAIGLIELLQTGKIIV 113

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +T Q+  +  +   IYL L   +      L  K+
Sbjct: 114 ARTLQSTMVYFVIALIYLILITSLTKLAKNLEKKV 148


>gi|209551328|ref|YP_002283245.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537084|gb|ACI57019.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 270

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 10/219 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIF-GLPTLV 236
                 FV + VLG+ + L         R    F+ +  + +P+L +  ++ F G P LV
Sbjct: 55  FVTLVAFVLATVLGLGICLLGMADSQIARQIARFYIEIIRGIPILVLLFYVAFVGAPALV 114

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                Y       V                    IAL+   ++FIAEI R+G  +V  GQ
Sbjct: 115 ---AGYNFLISPLVSSGMAEPILVRDLSLMWRAIIALTIGYSSFIAEIFRAGFQSVDLGQ 171

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA ALGL+  +  R V+ PQA+R I PPL++ +++++K+SSL   +G AD+  +G   
Sbjct: 172 IEAAKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVY 231

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              + +  E   I  +IYL L+I ++L + R    +  +
Sbjct: 232 AAGSFRFFETYSIVTYIYLILTIGLSLALRRTEKWMKSR 270



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 46/106 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T ++     + AT++G  +    ++ +++   I R Y+E+ R IP LV++
Sbjct: 43  FRTVVNGVGITVFVTLVAFVLATVLGLGICLLGMADSQIARQIARFYIEIIRGIPILVLL 102

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           F++       L    + ++ P         +    L++   A I +
Sbjct: 103 FYVAFVGAPALVAGYNFLISPLVSSGMAEPILVRDLSLMWRAIIAL 148


>gi|23501835|ref|NP_697962.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|161618908|ref|YP_001592795.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|163843220|ref|YP_001627624.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|254704253|ref|ZP_05166081.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|254719049|ref|ZP_05180860.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           sp. 83/13]
 gi|256061051|ref|ZP_05451207.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           neotomae 5K33]
 gi|256369377|ref|YP_003106885.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261325052|ref|ZP_05964249.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261754921|ref|ZP_05998630.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|265984041|ref|ZP_06096776.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306838982|ref|ZP_07471804.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|306840463|ref|ZP_07473222.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306843853|ref|ZP_07476448.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|23347771|gb|AAN29877.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|161335719|gb|ABX62024.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|163673943|gb|ABY38054.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
 gi|255999537|gb|ACU47936.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|261301032|gb|EEY04529.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261744674|gb|EEY32600.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|264662633|gb|EEZ32894.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306275608|gb|EFM57332.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306289478|gb|EFM60696.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306405949|gb|EFM62206.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 277

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 5/222 (2%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 +    K+   S V+G +LSL  T  +R  + +  ++L   Y+  F   G P L 
Sbjct: 61  PRYWSGLLITLKLVAISIVIGALLSLPITA-ARMSNSRWLRSLAFGYVYFF--RGTPLLA 117

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              L Y   F        +          +    +A S  TAA+ AEI+R  + +V  GQ
Sbjct: 118 QTFLIYY-GFGTFRPFLESVGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIESVAVGQ 176

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E A ALG++ R     V+LPQA+   + P  ++ + ++K S++   +   DL+      
Sbjct: 177 WEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRA 236

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++T    +  L    IYL +  ++    + L  ++    K+
Sbjct: 237 YSRTFD-FQTYLWAAVIYLLMVEILRHIWDALERRLTRHLKR 277



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      G + T  L    ++   ++   + A R+S ++ +  +   YV  FR  P L
Sbjct: 57  ETYGPRYWSGLLITLKLVAISIVIGALLSLPITAARMSNSRWLRSLAFGYVYFFRGTPLL 116

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
              F +Y    +  P  +   +  F     N
Sbjct: 117 AQTFLIYYGFGTFRPFLESVGLWVFFRDAWN 147


>gi|312881585|ref|ZP_07741363.1| hypothetical protein VIBC2010_10047 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370648|gb|EFP98122.1| hypothetical protein VIBC2010_10047 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 365

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/274 (21%), Positives = 122/274 (44%), Gaps = 16/274 (5%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            Y+ +      L       +  + +  +  +  ++   ++    GL            + 
Sbjct: 102 FYITLAIFTALLAYEKTPKRFWIWLFFVNIYPFIIGALLYGGIFGLEVVETHKWGGLLVT 161

Query: 191 VFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +   ++GIV+SL    A  L R       +++  +YI  +    L T++ +A        
Sbjct: 162 LIIALVGIVVSLPIGIALALGRRSEMPIIRSICTVYIEIWRGVPLITVLFMA-------- 213

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +    F+   + + + +   I +  ++AA++AE++R GL A+P+GQ EAA ALGLT+
Sbjct: 214 --SVMLPLFLAEGSETDKLIRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTY 271

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAI 364
            K   L++LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A 
Sbjct: 272 WKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFAT 331

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +    ++      ++ +   L  K+    K+
Sbjct: 332 ESYVFVALVFWVFCFGMSRYSIWLENKLHTGHKR 365



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG  +  GR S   ++  IC VY+E++R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIVVSLPIGIALALGRRSEMPIIRSICTVYIEIWRGVPLITVLFMASVM 216

Query: 152 VLSV 155
           +   
Sbjct: 217 LPLF 220


>gi|260912990|ref|ZP_05919475.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260632980|gb|EEX51146.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 223

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +  LS           + V S ++G++LS+    L      K G       +   L+ 
Sbjct: 1   MFSDYLSLMYSATLMTLGLAVCSLIVGLILSILFVILET---SKWGGIRKPASVMIALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +   +    FI  S     F     ALS   AA+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIYFGSTEVVEMITGEFIQFS----AFGCGVFALSIIFAAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AIPLGQWESGAALGLSRSYTFVHIVMPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +   T Q      I   +YL+++++  + + +L  +    E+
Sbjct: 174 RQAELVNANTHQPFTWYGIAALLYLAITLISQVIIRKLEYRFTRFER 220


>gi|261416889|ref|YP_003250572.1| polar amino acid ABC transporter, inner membrane subunit
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261373345|gb|ACX76090.1| polar amino acid ABC transporter, inner membrane subunit
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|302326258|gb|ADL25459.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 219

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L        T   IF  + +  I L L    L +    +  +     YIS  ++ G P L
Sbjct: 8   LPILWGGFCTTLAIFALTLLFSIPLGLLVAVL-KMSRYRIVRYPVSFYIS--VMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I   Y   +         F         F ++ +A S   AA+ AEI R G+ ++P+G
Sbjct: 65  LQIVAIYFGSYYLSEYTGVEF-----SFDRFPAVIVAFSINYAAYFAEIFRGGIQSIPKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  LGLT  +    ++LPQ ++ ++P   ++ + L+K++SLA  +   +L ++   
Sbjct: 120 QYEAAAMLGLTRGQTFYRIILPQVVKRVVPASANEVITLVKDTSLAQVIAVTELFALAKK 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                  +I  + +    Y   ++++++    +  K+
Sbjct: 180 QQAA-YASIYPLFVAGVFYYIANLLLSVLFAYVERKL 215



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 29/65 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  GF  T  +    ++ +  +G LV   ++S  ++V +    Y+ V R  P L+ I  +
Sbjct: 11  LWGGFCTTLAIFALTLLFSIPLGLLVAVLKMSRYRIVRYPVSFYISVMRGTPLLLQIVAI 70

Query: 149 YKSVL 153
           Y    
Sbjct: 71  YFGSY 75


>gi|116688694|ref|YP_834317.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|116646783|gb|ABK07424.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Burkholderia cenocepacia
           HI2424]
          Length = 226

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 6/232 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  F        L           KI + + V+GIV       L R    K        
Sbjct: 1   MMHQFDWSSIPGALPTLWSGAVVTFKITLIAIVIGIVWGTLL-ALLRLSGVKPLAWFAKA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++ F       LV++ L + L    P L Q       T+     S  +A S + AA+ +
Sbjct: 60  YVTVFRSIP---LVMVLLWFFL--IVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL  
Sbjct: 115 EIIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  AD       + ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 VISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR 226



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 17  LWSGAVVTFKITLIAIVIGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWF 76

Query: 149 YKSVLSV 155
           +  V  +
Sbjct: 77  FLIVPQL 83


>gi|312959112|ref|ZP_07773631.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311286882|gb|EFQ65444.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 365

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 119/267 (44%), Gaps = 16/267 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            + PL +  F +K++  +  +  + IV  F +     GL+    +      + +    +G
Sbjct: 109 GVAPLFISRFAHKAIYGLSFLVLYPIVAYFLLHGGVFGLANVATSQWGGLMLTLVIATVG 168

Query: 198 IVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           I  +L       L R  +    + + + +I  +    L T VL      L    P    F
Sbjct: 169 IAGALPLGIVLALGRRSNMPAIRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMNF 227

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +         + +   I +  + +A++AE+VR GL A+P+GQ EAA A+GL + ++  LV
Sbjct: 228 D---------KLLRALIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLV 278

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWM 371
           +LPQA++ +IP + + ++ L K++SL + +G  DL++            G A E  +   
Sbjct: 279 ILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAA 338

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++      ++ +   L  K+    K+
Sbjct: 339 LVFWIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G+  A  +G ++  GR S    +  +C  ++E +R +P + V+F   
Sbjct: 155 WGGLMLTLVIATVGIAGALPLGIVLALGRRSNMPAIRVVCVTFIEFWRGVPLITVLFMSS 214

Query: 150 KSVLSVLPI 158
             +   LP 
Sbjct: 215 VMLPLFLPE 223


>gi|308187188|ref|YP_003931319.1| glutamine transport system permease protein glnP [Pantoea vagans
           C9-1]
 gi|308057698|gb|ADO09870.1| Putative glutamine transport system permease protein glnP [Pantoea
           vagans C9-1]
          Length = 222

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 13/231 (5%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            + F        L      +     I +   + G V+ L A    R    +  K L L++
Sbjct: 4   TMNFDSKYIWESLPLLLQGLQLTLIISLSGLLGGFVIGLLAGA-CRALGGRITKTLSLIF 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   LI G P +V +   Y   F  P++                +  + +   + A+IAE
Sbjct: 63  VE--LIRGTPIMVQVMFIY---FALPMVIPIRI-------DPITAAIVTIVINSGAYIAE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  ++++ +G  EA++A+GL+ R     V++P A+R +IP L +Q++  +K++SL + 
Sbjct: 111 ITRGAILSINKGFKEASLAMGLSQRSTQWHVIMPLALRRMIPALGNQWIISIKDTSLFIV 170

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G A+L   G  II    +A+E+      IYL +++ ++  + +L  +I +
Sbjct: 171 IGVAELTRQGQEIIAGNFRALEVWTAVAMIYLLVTLCLSFLLKQLEKRIHI 221


>gi|304396997|ref|ZP_07378877.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355793|gb|EFM20160.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 366

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 80/409 (19%), Positives = 148/409 (36%), Gaps = 66/409 (16%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG-- 60
                  T   SR        + +     +L L    +    +    N +      +G  
Sbjct: 6   HETPPVPTTPVSRAWLWARKNLFSSWFNTLLTLFCIWVIWHVIPPALNWLVFQANWIGTT 65

Query: 61  ----------IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110
                       F+  R G +   G+ P+        A+++G V+         I    +
Sbjct: 66  RADCTKEGACWVFIHARFG-QFMYGLYPHELRWRINLALVIGLVS---------IVPMFL 115

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            +L   GR             Y+  +  I P++V F LY   L +  +            
Sbjct: 116 KSLPYRGR-------------YIAAWAVIYPVIVWFLLYGGYLGLERVETRQ-------- 154

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                    TLT+   +     +  LGI+L+L      R       + L +++I  +   
Sbjct: 155 -----WGGLTLTLIIASVGIAGALPLGILLAL-----GRRSRMPVVRTLSIIFIEFWRGV 204

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L T++ ++           +    F+   T   + +   + +  + +A++AE+VR GL 
Sbjct: 205 PLITVLFMS----------SVMLPLFMSEGTNIDKLVRALVGVILFQSAYVAEVVRGGLQ 254

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EAA +L L + K   LV+LPQA++  IP L +  + L K++SL + +G  DL 
Sbjct: 255 ALPKGQYEAAESLALGYWKTQMLVILPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLF 314

Query: 351 SVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           S            G + E  +    +Y      ++ +   L  +     
Sbjct: 315 SSVQQATVDPTWLGMSTEGYVFAALVYWIFCFSMSRYSQYLEKRFHTGR 363


>gi|294851193|ref|ZP_06791866.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|294819782|gb|EFG36781.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 240

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 14/226 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +     +           I + +   G ++S+    L    H +  + +   Y+
Sbjct: 1   MNFDFSVIFDNWTLFARGTWLTIVIAIVAIATGFLISI-PIALMALSHRRPLRWISSAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       +VL    Y L F                 PE +   IAL+ + +++ AEI
Sbjct: 60  EWFRNI-PFIVVLYLFFYGLPF------------MGVRLPESIVGTIALAFFASSYFAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S+   +
Sbjct: 107 IRGAILAVPQGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             A+L   G  I  +T    EI L    IY  ++ + A  M+R   
Sbjct: 167 TVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAYLMHRTEK 212



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T    G   T  +A   +    +I   +    LS  + + WI   YVE FRNIP +VV+
Sbjct: 12  WTLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPLRWISSAYVEWFRNIPFIVVL 71

Query: 146 FFLYKSVL 153
           +  +  + 
Sbjct: 72  YLFFYGLP 79


>gi|294084530|ref|YP_003551288.1| ABC transporter permease [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664103|gb|ADE39204.1| ABC transporter permease protein [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 224

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 17/235 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +       +      L+    T+   A       V+G+VL+      +R    +  +   
Sbjct: 2   YEWDFIPVLTETGFLLAGFRNTLVLTATALSGGLVVGLVLAF-----ARLSSRRWVRFPA 56

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            + I  F       LV +   +   F  P++        +     F++  +  +  + AF
Sbjct: 57  DVIIEVFRTTPP--LVQL---FWFFFGLPIV-------LAVEMTPFLAAALTFTIQSGAF 104

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI R+G++++  GQ EAA A+G+ + +A R ++LPQA++ + P +  + + L+K ++L
Sbjct: 105 FAEIFRAGIVSIEHGQWEAAKAIGMRYNQAMRRIILPQAVKRMFPSMMERSIELMKTTTL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              V +ADL+     +  +T + +E+  +   IY     + +   +R   ++   
Sbjct: 165 VATVSYADLLFQANELAQKTFRPLEVFTVVALIYFVTISIFSFLASRFERRLTRS 219



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 74/202 (36%), Gaps = 2/202 (0%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    +    +L GF NT  L  + +    ++G ++   RLS+ + V +   V +EVFR
Sbjct: 5   DFIPVLTETGFLLAGFRNTLVLTATALSGGLVVGLVLAFARLSSRRWVRFPADVIIEVFR 64

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             PPLV +F+ +  +  VL +     +     F    G  F  +       I    +   
Sbjct: 65  TTPPLVQLFWFFFGLPIVLAVEMTPFLAAALTFTIQSGAFFAEIFRAGIVSIEHGQWEAA 124

Query: 198 IVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
             + +   +  R     +   +  P +   +  +    TLV       L F    L Q  
Sbjct: 125 KAIGMRYNQAMRRIILPQAVKRMFPSMMERSIELMKTTTLVATVSYADLLFQANELAQKT 184

Query: 256 FIGGSTVSPEFMSLYIALSCYT 277
           F      +   +  ++ +S ++
Sbjct: 185 FRPLEVFTVVALIYFVTISIFS 206


>gi|289646273|ref|ZP_06477616.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 246

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVERRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|29832824|ref|NP_827458.1| glutamine ABC transporter permease protein [Streptomyces
           avermitilis MA-4680]
 gi|29609945|dbj|BAC73993.1| putative polar amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 317

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 16/258 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGI 198
           L+    LY  V+     P          +                  + V      VLG+
Sbjct: 67  LITGVVLYFVVVGAPGWPRTKETFFDAQYAREALPKVLEGLWLNVRLLLVCGAAVLVLGM 126

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           ++++  T     F     +AL   Y   F   GLP ++ + +   +    P L     + 
Sbjct: 127 LIAIARTLRGPVFF--PLRALAAAYTDFF--RGLPLIINLMI---VVLGVPALR----LQ 175

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV P  +    AL+   +A++AE+ R+G+ +V   Q  AA +LGLT+R+A R V+LPQ
Sbjct: 176 GVTVDPVLLGGT-ALTLTYSAYVAEVFRAGIESVHPSQRAAARSLGLTNRQALRHVVLPQ 234

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  +PPL +  ++L K++ L    G  D V     I+ ++       ++   ++++L+
Sbjct: 235 AVRRQVPPLLNDLVSLQKDTGLVSIGGAVDAVRAADIIVGRSLNYTP-YIVAGLLFVALT 293

Query: 379 IMIALFMNRLNAKIALKE 396
           I +  F + + A++  + 
Sbjct: 294 IPMTRFTDWVTARMDRQR 311


>gi|329999713|ref|ZP_08303488.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|328538244|gb|EGF64390.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 308

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SV   P     +    F +   L     T+       V S + G +L+L     S     
Sbjct: 34  SVAFNPRWEWGVFARWFFDPVILEGLGQTLLLTLLGTVLSVIFGGLLALARLSSSWLLSS 93

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--------E 265
                +       +L   LP +V++ + Y   +    L       G T +         +
Sbjct: 94  LAWGYI-------WLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQ 146

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+P
Sbjct: 147 FSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILP 206

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++ ++L K +++   +   +L      I N+T + I ++++    YL+++ +++   
Sbjct: 207 SGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAIQ 266

Query: 386 NRLNAKIALKEKK 398
             +   +A  E++
Sbjct: 267 YLVERGLARSERR 279


>gi|167820594|ref|ZP_02452274.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           91]
          Length = 313

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGS 260
           L     S          + L      ++  L    L  L   +    P     F  +  +
Sbjct: 102 LARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYDHVRLGVPFTGITFAEVATT 161

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAM
Sbjct: 162 DLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 381 IALFMNRLNAKIALKEKK 398
           +++   ++  + A    +
Sbjct: 282 LSIVQAQVERRYARGAVR 299


>gi|152998390|ref|YP_001343225.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150839314|gb|ABR73290.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 366

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 16/257 (6%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FA 204
           + K  LS+  +  + IV  F       GL     ++     + V   V+GIV S      
Sbjct: 119 INKLYLSIAILVVYPIVAYFLFAGGVFGLEVVETSLWGGLFLTVLLGVIGIVASFPLGIV 178

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             L R       K++ +++I T     L T++ +A    +    P    FN         
Sbjct: 179 LALGRRSEMPIAKSVCVVFIETIRAVPLITILFMASV-MIPLFLPEGLNFN--------- 228

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           + + + I ++ ++AA++AE+VR GL A+P+GQ EAA A+GLT+ ++  LV+LPQA++ +I
Sbjct: 229 KLLRVLIGITLFSAAYMAEVVRGGLQAIPKGQYEAADAMGLTYWQSMILVILPQALKLVI 288

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVS---VGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P + + ++ L K+++L   VG  D +          N  G  IE       IY  +   +
Sbjct: 289 PGIVNSFIALFKDTTLVYIVGMFDFLGRIQAANHDSNWLGTTIEGYAFAALIYWVICFGM 348

Query: 382 ALFMNRLNAKIALKEKK 398
           + +   L  K+    K+
Sbjct: 349 SRYSMALERKLETGHKR 365



 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 74/201 (36%), Gaps = 5/201 (2%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T++  G   T  L   G++ +  +G ++  GR S   +   +C V++E  R +P + ++F
Sbjct: 152 TSLWGGLFLTVLLGVIGIVASFPLGIVLALGRRSEMPIAKSVCVVFIETIRAVPLITILF 211

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSL 202
                +   LP   +   L   +       +     +       +    +     + L+ 
Sbjct: 212 MASVMIPLFLPEGLNFNKLLRVLIGITLFSAAYMAEVVRGGLQAIPKGQYEAADAMGLTY 271

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGST 261
           + + +     +     +P +  S   +F   TLV I   +  L   +      N++G + 
Sbjct: 272 WQSMILVILPQALKLVIPGIVNSFIALFKDTTLVYIVGMFDFLGRIQAANHDSNWLGTTI 331

Query: 262 VSPEFMSLYIALSCYTAAFIA 282
               F +L   + C+  +  +
Sbjct: 332 EGYAFAALIYWVICFGMSRYS 352


>gi|307730960|ref|YP_003908184.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307585495|gb|ADN58893.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 225

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 6/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +           KI + + V+GI+       L R    K  +     Y++ F       L
Sbjct: 13  MPTLWTGAIVTFKITLIAIVIGIIWGTVLAML-RLSSFKPFEWFAKGYVTIFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P + Q      + +     S  +A S + AA+ +EI+R+G+ AVPRG
Sbjct: 69  VMVLLWFFL--IVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ AA ALG+ + +A RL++LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNAAYALGMGYGQAMRLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G  +E++L     Y  + ++ +  +  L  K+A 
Sbjct: 187 IGDRDGTNVEMVLFAGACYFVICVIASSLVKGLQKKVAR 225



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   I GT++   RLS+ K   W  + YV +FR+IP ++V+ + 
Sbjct: 16  LWTGAIVTFKITLIAIVIGIIWGTVLAMLRLSSFKPFEWFAKGYVTIFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|258623749|ref|ZP_05718708.1| polar amino acid ABC transporter, permease protein [Vibrio mimicus
           VM603]
 gi|258583967|gb|EEW08757.1| polar amino acid ABC transporter, permease protein [Vibrio mimicus
           VM603]
          Length = 265

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 14/255 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V      +         H +     +F +    +   +             ++  +   
Sbjct: 23  LVWLLDSGAQAMGYQWQWHRVPEYVLIFEDGEWWAGDLMHGLLVTLQLTGISLIFTLALG 82

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
             T L R      G+AL   YI   ++   P LV I L Y +             G    
Sbjct: 83  LTTALLRQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIG 128

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +  +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++ 
Sbjct: 129 LDRFATAVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQR 188

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +PPLT++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++
Sbjct: 189 TLPPLTNEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLS 248

Query: 383 LFMNRLNAKIALKEK 397
                L  K+  + +
Sbjct: 249 ALSAWLEHKLGAQWR 263



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 11/128 (8%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
             +    +  +L+    +W +++    M       G  +   R    + + ++ +     
Sbjct: 7   RPLLFATLQMILVFAGLVWLLDSGAQAM-------GYQWQWHR----VPEYVLIFEDGEW 55

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  ++ G + T  L    +I    +G      R S + +   +   Y+ V RN P LV 
Sbjct: 56  WAGDLMHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQ 115

Query: 145 IFFLYKSV 152
           I+ LY   
Sbjct: 116 IYLLYFVF 123


>gi|188591218|ref|YP_001795818.1| glutamate/aspartate transporter; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|170938112|emb|CAP63098.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 227

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 6/229 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                +N   L      M  + KI V + V+GI+       + R    +        Y++
Sbjct: 5   FDFTSINPATLHVLGEGMMVSLKITVTAVVVGIIWGTIL-AMMRLSSFRLLNWFAQGYVT 63

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F       LV++ L + L   + +   FN    + +     S  +A + + AA+ +EI+
Sbjct: 64  IFRSIP---LVMVLLWFFLIIPQVLQSIFNLSPATDLR--MTSALVAFALFEAAYYSEII 118

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V RGQM AA ALG+T+ ++ RLV+LPQA R+++P L +Q + L +++SL     
Sbjct: 119 RAGIQSVSRGQMFAAQALGMTYGQSMRLVILPQAFRNMVPLLLTQGIILFQDTSLVYVSA 178

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            AD       I  + G+ +E++L    +Y  +    +L + R   K+A+
Sbjct: 179 LADFFGQAYGIGERDGRIVEMLLFAGLVYFIICFSASLLVKRYQKKVAV 227



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 40/80 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + +  +  + ++   I GT++   RLS+ +L+ W  + YV +FR+IP ++V+ +
Sbjct: 17  VLGEGMMVSLKITVTAVVVGIIWGTILAMMRLSSFRLLNWFAQGYVTIFRSIPLVMVLLW 76

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
            +  +  VL    +      
Sbjct: 77  FFLIIPQVLQSIFNLSPATD 96


>gi|330891011|gb|EGH23672.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. mori str. 301020]
          Length = 246

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ +LG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPAGQYEASRSLGMGYMRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVERRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|28869032|ref|NP_791651.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|28852272|gb|AAO55346.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|330879704|gb|EGH13853.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 229

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVVRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|21264490|sp|P52625|PATM_VIBHA RecName: Full=Probable amino-acid ABC transporter permease protein
           patM
 gi|15080757|gb|AAA78255.2| membrane protein [Vibrio harveyi]
          Length = 223

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS F   G P LV + L   L++  P +  F           F +  I L+ + AA++A
Sbjct: 58  YISFF--RGTPLLVQLFL---LYYGLPQIFPF-----MVGIDAFSAAVIGLTLHFAAYMA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA 
Sbjct: 108 ESIRAAIIGIDRSQMEASLSVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 168 TLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 34/71 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLVFSLILSVILANIRVFKLPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  + P  
Sbjct: 75  YYGLPQIFPFM 85


>gi|261213024|ref|ZP_05927308.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260838089|gb|EEX64766.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 265

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 34  MGYTWQWHRVPEYVLIFEDGQWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 89  RQSHSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAAHSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 254

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 255 EHKLGAQWR 263



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 11/128 (8%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
             +    +  +L+    +W +++    M       G  +   R    + + ++ +     
Sbjct: 7   RPLLFATLQMILVFAGLVWLLDSGAQAM-------GYTWQWHR----VPEYVLIFEDGQW 55

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV 
Sbjct: 56  WAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSHSLVGRALGTGYIAVVRNTPLLVQ 115

Query: 145 IFFLYKSV 152
           I+ LY   
Sbjct: 116 IYLLYFVF 123


>gi|296129248|ref|YP_003636498.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
 gi|296021063|gb|ADG74299.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
          Length = 273

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 20/209 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              F      G +L+L      R       + +   Y+  F       LV+IA+ Y +  
Sbjct: 76  LAAFGVGLTFGTLLALM-----RLSSVAPYRWISTTYVEFFRGIPA-LLVVIAVGYAVPI 129

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G  ++       IAL   +AA+I+E VR+G+ AVPRGQ+EAA +LG++
Sbjct: 130 AF----------GVALTSITAIAAIALGSVSAAYISETVRAGIQAVPRGQVEAARSLGMS 179

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQ 362
           H +    V+LPQA R+++PPLT++ L L K++SL   +G    F +L  VG   ++    
Sbjct: 180 HTRTMIEVVLPQAFRTVMPPLTNEVLLLTKDTSLLFVLGQTPEFFELTKVGRDALSTASG 239

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +  + +    YL ++I +     RL  +
Sbjct: 240 GLTGLFVVGACYLVITIPLGFLARRLERR 268



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 29/64 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           F+NT     +        GTL+   RLS+     WI   YVE FR IP L+V+  +  +V
Sbjct: 68  FLNTVTYTLAAFGVGLTFGTLLALMRLSSVAPYRWISTTYVEFFRGIPALLVVIAVGYAV 127

Query: 153 LSVL 156
               
Sbjct: 128 PIAF 131


>gi|323339490|ref|ZP_08079769.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
 gi|323093104|gb|EFZ35697.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ruminis ATCC 25644]
          Length = 215

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +    L    +T+       VFS  LG++ +L      +  +        +L  
Sbjct: 1   MDYIFEIMPSLLDGTEMTLSIFVLTLVFSLPLGLICALGRCSKFKILN-------AVLRF 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +L+ G P L+ +   +              +G   V P + +  +A      A+ AEI
Sbjct: 54  YIWLMRGTPLLLQLIFVFY---------GLPLLGTGIVLPRYAAALVAFVLNYTAYFAEI 104

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL ++ RGQ E+A  L LT+ +  R ++ PQ M+ ++P + ++ +NL+K+SSL   +
Sbjct: 105 FRGGLQSIDRGQYESARVLRLTYWQTIRKIIAPQVMKIVVPSIGNEVINLIKDSSLVYVI 164

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G  DL+  G    ++    I  +++   IYL+L+ +    + ++ A
Sbjct: 165 GLGDLLRAGNVASSRDVSLIP-LVLVGIIYLALTAVFTWMLQKVEA 209



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +  +G +   GR S  K++  + R Y+ + R  P L+ + F+
Sbjct: 11  LLDGTEMTLSIFVLTLVFSLPLGLICALGRCSKFKILNAVLRFYIWLMRGTPLLLQLIFV 70

Query: 149 YKSVL 153
           +  + 
Sbjct: 71  FYGLP 75


>gi|91226241|ref|ZP_01261081.1| putative amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 12G01]
 gi|91189252|gb|EAS75531.1| putative amino acid ABC transporter, permease protein [Vibrio
           alginolyticus 12G01]
          Length = 246

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 30/266 (11%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            FR I    ++     S                G+      ++    T+  +    +F+ 
Sbjct: 2   TFRTIWLFSLLLLTGCSDYQ-WGWYVLDPSTDQGLTNLKFLIAGFNDTIQVSLLSMLFAM 60

Query: 195 VLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
            LG++++L A       +     + +  +++P+L +  ++ +G+PTL+ ++L +      
Sbjct: 61  SLGLIVALPALSDSASLKWINRIYVEVIRSVPVLVLLLWVYYGMPTLLDVSLNH------ 114

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                            F +  IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL++ 
Sbjct: 115 -----------------FWAGVIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLSYW 157

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  RLV+LPQA R I+PPL +Q++ +LK SSL   +G +DL      ++      +EI  
Sbjct: 158 QKMRLVILPQAFRQILPPLGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYT 217

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  YL L + ++  +  L  +IA+
Sbjct: 218 FLVLEYLLLILFVSQAVRWLEKRIAI 243



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               +    ++ GF +T  ++   M+ A  +G +V    LS +  + WI R+YVEV R++
Sbjct: 32  DQGLTNLKFLIAGFNDTIQVSLLSMLFAMSLGLIVALPALSDSASLKWINRIYVEVIRSV 91

Query: 140 PPLVVIFFLYKSVL 153
           P LV++ ++Y  + 
Sbjct: 92  PVLVLLLWVYYGMP 105


>gi|260598727|ref|YP_003211298.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Cronobacter turicensis z3032]
 gi|260217904|emb|CBA32476.1| Histidine transport system permease protein hisM [Cronobacter
           turicensis z3032]
          Length = 238

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K       +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLIASVVMGGVLALFL-AIGRVSENKVVWFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   V+     +             +AL+  T A+  EI    + AVP
Sbjct: 71  LYVQLLVFYSGMYTLDVVKGTPLL-NEFFRSGLNCTVLALTLNTCAYTTEIFAGAIRAVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|254701711|ref|ZP_05163539.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 5 str. 513]
 gi|261752262|ref|ZP_05995971.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261742015|gb|EEY29941.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
          Length = 277

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 5/222 (2%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 +    K+   S V+G +LSL  T  +R  + +  ++L   Y+  F   G P L 
Sbjct: 61  PRYWSGLLITLKLVAISIVIGALLSLPITA-ARMSNSRWLRSLAFGYVYFF--RGTPLLA 117

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              L Y   F        +          +    +A S  TAA+ AEI+R  + +V  GQ
Sbjct: 118 QTFLIYY-GFGTFRPFLESVGLWVLFRDAWNCAILAFSLNTAAYQAEILRGAIESVAVGQ 176

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E A ALG++ R     V+LPQA+   + P  ++ + ++K S++   +   DL+      
Sbjct: 177 WEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRA 236

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++T    +  L    IYL +  ++    + L  ++    K+
Sbjct: 237 YSRTFD-FQTYLWAAVIYLLMVEILRHIWDALERRLTRHLKR 277



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 30/76 (39%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      G + T  L    ++   ++   + A R+S ++ +  +   YV  FR  P L
Sbjct: 57  ETYGPRYWSGLLITLKLVAISIVIGALLSLPITAARMSNSRWLRSLAFGYVYFFRGTPLL 116

Query: 143 VVIFFLYKSVLSVLPI 158
              F +Y    +  P 
Sbjct: 117 AQTFLIYYGFGTFRPF 132


>gi|145635027|ref|ZP_01790733.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittAA]
 gi|260582108|ref|ZP_05849902.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus
           influenzae NT127]
 gi|319776578|ref|YP_004139066.1| arginine transporter subunit [Haemophilus influenzae F3047]
 gi|145267635|gb|EDK07633.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittAA]
 gi|260094740|gb|EEW78634.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus
           influenzae NT127]
 gi|317451169|emb|CBY87402.1| arginine transporter subunit [Haemophilus influenzae F3047]
          Length = 221

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F     A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVFA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|317153798|ref|YP_004121846.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316944049|gb|ADU63100.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 238

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 18/251 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  V+               +F     +      +       + +F +G+   L   RLS
Sbjct: 3   WNVVIDNFDYFLWGRASVDWVFPFVHDVGGMASGIILAFFGIIGAFWIGLAAGLM--RLS 60

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +  K        Y +   I  +  + L+ L +   F  PVL            P F +
Sbjct: 61  RRWWIK--------YPAVIYIEIIRGIPLLLLIFWFFFLAPVLLG-------RSLPAFST 105

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
                  +T A+I EIVR+G++A+P GQMEAA   GL+  +A R V+LPQA+R++IP   
Sbjct: 106 TLACFIIFTGAYIGEIVRAGVLALPNGQMEAARGSGLSRYQAMRYVILPQALRNMIPSFV 165

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNR 387
           +Q+++L K++SLA  +G  +L   G  + N+    + EI +    +Y  +  ++     R
Sbjct: 166 NQFVSLTKDTSLASVIGVNELTRTGVQVDNREMIASFEIWITIAALYFCICYVLTSISRR 225

Query: 388 LNAKIALKEKK 398
           + A ++  + +
Sbjct: 226 MEAHLSRYQAR 236



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 25/49 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           G  +   LAF G+I A  IG   G  RLS    + +   +Y+E+ R IP
Sbjct: 32  GMASGIILAFFGIIGAFWIGLAAGLMRLSRRWWIKYPAVIYIEIIRGIP 80


>gi|260439248|ref|ZP_05793064.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Butyrivibrio crossotus DSM
           2876]
 gi|292808262|gb|EFF67467.1| amino acid ABC transporter, amino acid-binding/permease protein,
           His/Glu/Gln/Arg/opine family [Butyrivibrio crossotus DSM
           2876]
          Length = 236

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 99/227 (43%), Gaps = 12/227 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             + L     T+       +   V+G +++            +    +   Y++ F   G
Sbjct: 21  YVKVLEGLKNTLTIAVLGLIIGIVIGTLIATARVIPQYKVLPRILNKICSFYVALF--RG 78

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P +V + + Y +                +         +     +AA+I+EI+R G+++
Sbjct: 79  TPIVVQLLVFYYVLLPL----------MGSRMTGIQVAVMVFGLNSAAYISEIMRGGIMS 128

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQMEA  A+GL+       +++PQA+++I+P + ++ + L+K++S+   VG  DL  
Sbjct: 129 VDSGQMEAGRAVGLSFGTTMLKIVIPQAVKNILPTMGNELIALIKDTSVVSFVGATDLYV 188

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I +   + +   L+   IY+ L ++I+  +  +   +   +++
Sbjct: 189 AFSFIGSSNYEFMVPYLVMALIYIVLVLIISFAIKLMERSLRRSDRR 235



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRNIPPLVV 144
           L G  NT  +A  G+I   +IGTL+   R+        +++  IC  YV +FR  P +V 
Sbjct: 25  LEGLKNTLTIAVLGLIIGIVIGTLIATARVIPQYKVLPRILNKICSFYVALFRGTPIVVQ 84

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMF 170
           +   Y  +L ++      I +   +F
Sbjct: 85  LLVFYYVLLPLMGSRMTGIQVAVMVF 110


>gi|121587165|ref|ZP_01676940.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121726614|ref|ZP_01679850.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147672412|ref|YP_001215044.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153817648|ref|ZP_01970315.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153821766|ref|ZP_01974433.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|254850197|ref|ZP_05239547.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255746231|ref|ZP_05420178.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262158721|ref|ZP_06029835.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262168871|ref|ZP_06036565.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|121548604|gb|EAX58656.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121630920|gb|EAX63300.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|126511804|gb|EAZ74398.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126520762|gb|EAZ77985.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|146314795|gb|ABQ19335.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|254845902|gb|EET24316.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255735985|gb|EET91383.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262022570|gb|EEY41277.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|262029601|gb|EEY48251.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
          Length = 265

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 34  MGYTWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 89  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 254

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 255 EHKLGAQWR 263



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 6   FRPLLFAALQMMLVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGE 54

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 55  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 114

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 115 QIYLLYFVF 123


>gi|237732340|ref|ZP_04562821.1| histidine transport system permease [Citrobacter sp. 30_2]
 gi|226907879|gb|EEH93797.1| histidine transport system permease [Citrobacter sp. 30_2]
          Length = 235

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRYTGVAITLWLLISSVVMGGILALFL-AIGRVSSNKFIQF--PIWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   +F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTDFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSSFKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|315444883|ref|YP_004077762.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|315263186|gb|ADT99927.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 291

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 15/239 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +       G       L     T+   A   V + +LG VL +   RLS H   +   +
Sbjct: 48  AEKWEPFLTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGV--GRLSTHTPIRWVSS 105

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                +       +P L+++   Y L+    V          +       +   L+ Y  
Sbjct: 106 -----VLVEFFRAVPVLIMMIFAYFLYAFYDVFP--------SKYLALAGVITGLTLYNG 152

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A IAEIVR+G+ A+PRGQ EA+ ALGLT  +  R +LLPQA+ S++P L SQ + +LK++
Sbjct: 153 AVIAEIVRAGVHALPRGQAEASSALGLTWGQTMRSILLPQAVTSMLPVLISQLVVVLKDT 212

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L   + F ++V  G  I +  G  I  +++   + ++L+  ++ F   L  ++    K
Sbjct: 213 ALGYQITFVEMVRQGTVIGSAYGNYIPALIVIAALMIALNFSLSWFATWLEKRMRRSRK 271



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 45/97 (46%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +   P+ +   + T +L G   T   A   ++ A I+G ++G GRLS +  + W+  V 
Sbjct: 48  AEKWEPFLTGDLWRTYVLPGIEGTLTAAAVSIVLALILGFVLGVGRLSTHTPIRWVSSVL 107

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           VE FR +P L+++ F Y         P   + L   +
Sbjct: 108 VEFFRAVPVLIMMIFAYFLYAFYDVFPSKYLALAGVI 144


>gi|300865206|ref|ZP_07110024.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
 gi|300336797|emb|CBN55174.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillatoria sp. PCC 6506]
          Length = 398

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 81/312 (25%), Positives = 131/312 (41%), Gaps = 21/312 (6%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI--CRVYVEVFRNIPPLVVIFFL 148
           V   N   L   G   +     L      S   L+  I          R I P V+ +  
Sbjct: 103 VSLWNHPLLIVLG--ASITAALLFPTDLTSRLWLLGNIIIAAASYSFGRQINPQVMRWLP 160

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
              V S   I            +         LT+         SF LG++L+L      
Sbjct: 161 LSWVFSFPVILWLIKGGLGLKEVPTNDWGGLMLTLFAAVVSIALSFPLGVLLAL-----G 215

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       K   +LYI   ++ GLP + ++ L         V+ QF    G+      + 
Sbjct: 216 RQSSLPVVKYFSILYIE--IVRGLPLIGILFLG-------QVMLQFFLPPGAPKLDRLVR 266

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL+ ++AA++AE VR GL +VPRGQ+EAA +LGL       L++LPQA+R++IP + 
Sbjct: 267 AIAALTLFSAAYLAENVRGGLQSVPRGQIEAARSLGLNTPLVILLIVLPQALRAVIPAIV 326

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFM 385
            Q++ L K++SL    G  +LV +  T++     +G+  E+ +    IY      ++L  
Sbjct: 327 GQFIGLFKDTSLLSLFGILELVGISRTVLANPAYSGRYAEVYVFIGVIYWVFCYSMSLAS 386

Query: 386 NRLNAKIALKEK 397
            +L   + + +K
Sbjct: 387 RKLEQTLGVGQK 398


>gi|260430643|ref|ZP_05784615.1| L-cystine transport system permease protein TcyL [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418084|gb|EEX11342.1| L-cystine transport system permease protein TcyL [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 224

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R F       L LL+IS F   G P LV + L Y   +  P +  F      T      +
Sbjct: 45  RVFRVPVLDQLVLLFISFF--RGTPLLVQLFLFY---YGLPQVMSF-----LTAIDGVTA 94

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ + AA++AE +R+ +I V R Q EAA ++G+T  +  R V+LPQA R   P L 
Sbjct: 95  AIMGLTLHFAAYMAETIRAAIIGVDRSQWEAAQSIGMTQGQMMRRVILPQAARVAAPTLV 154

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++++K +SLA  +G  +++         +    E  L+   IY  +   ++     L
Sbjct: 155 NYFIDMIKGTSLAFTLGVTEMMGAAQKEAAGSFLYFEAFLVVAVIYWIMVEGLSQAQRAL 214

Query: 389 NAKI 392
             ++
Sbjct: 215 EIRL 218


>gi|221231431|ref|YP_002510583.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|298229829|ref|ZP_06963510.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255469|ref|ZP_06979055.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502400|ref|YP_003724340.1| amino acid ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|220673891|emb|CAR68397.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|298237995|gb|ADI69126.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 225

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + +  F+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGFFILAMVLGIFFGAMS-TSKRPILRILAHIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++        + + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHTIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL+ LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLITLPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  +  ++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGFFILAMVLGIFFGAMSTSKRPILRILAHIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHTIMIPIYW 94


>gi|254360617|ref|ZP_04976766.1| possible arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261493366|ref|ZP_05989892.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496632|ref|ZP_05993012.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|153091157|gb|EDN73162.1| possible arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261307835|gb|EEY09158.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311010|gb|EEY12187.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 223

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +++  L+           I + S ++G++LS+F   L      +T K   +   ++ +I 
Sbjct: 1   MSSDILNLLVNATLMTLGIALASLLIGMLLSIFFVVL------ETSKIACIRKPTSIIIT 54

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  L  I + + ++F   +   F           F    IAL    AA+ ++ +R  + 
Sbjct: 55  LLRGLPEILVVFLIYFGL-IQVIFLITDEFAELNAFWCGAIALGIIFAAYASQSLRGAIK 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ E+  ALGL+  +    ++LPQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AIPVGQWESGTALGLSRAQVFVRIILPQVWRHALPGLSNQWLVLLKDTALVSLIGVDDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I   T Q      I   IYL+++++    +  L  +    E+
Sbjct: 174 RQSELINANTHQPFTWYGIAALIYLAITLISQRVIKVLEGRFTRFER 220


>gi|70733437|ref|YP_263212.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68347736|gb|AAY95342.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 286

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 111/253 (43%), Gaps = 18/253 (7%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            ++   F     L    I D    L       +  L    LT+   A   V S +LG V 
Sbjct: 45  LVLFASFFLSFELKFSIILDKLPNLLGLHLSPSGFLQGAALTLFLCACSIVASSLLGFV- 103

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               T L+R         +   Y S F    L          Q+      L Q   + G+
Sbjct: 104 ----TALARLSSSAVAFGIASFYASFFRGTPLLI--------QILLIYLGLPQLGVVPGA 151

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +  IALS    A+++EI R+G++ VP GQ +AA+ALG++       V LPQAM
Sbjct: 152 I-----TAGIIALSLNYGAYLSEIFRAGILGVPHGQRQAALALGMSDSVIFWQVTLPQAM 206

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++     IY  LSI 
Sbjct: 207 RTIIPPATNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLSTAALIYWLLSIG 266

Query: 381 IALFMNRLNAKIA 393
           + L   R+     
Sbjct: 267 LELIQARMERHYG 279



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L    ++ ++++G +    RLS++ +   I   Y   FR  P L+ I  +
Sbjct: 79  FLQGAALTLFLCACSIVASSLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLI 138

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +  +P         + LN 
Sbjct: 139 YLGLPQLGVVPGAITAGIIALSLNY 163


>gi|254253996|ref|ZP_04947313.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124898641|gb|EAY70484.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 218

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     +      L    +T++  A  FV S VLG+VL+L           K  +   + 
Sbjct: 1   MFFQNAIDFLPILLKGAVVTIEITACAFVLSSVLGLVLALL----------KVSRNRAVS 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              + ++  +  L +I   + ++F  P L              F +  + L    +A+ A
Sbjct: 51  AAGSTIVNVIRGLPIIVQLFYMYFVLPDL--------GVQLSAFQAGVLGLGIAYSAYQA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ A+ RGQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A 
Sbjct: 103 ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  A++   G  I + T Q + +  +   +YL+L + +   +NRL  ++AL+ 
Sbjct: 163 TITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRR 216


>gi|134291670|ref|YP_001115439.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134134859|gb|ABO59184.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 216

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F   + L+   L       + + SF+ G ++ L    + R    +  +    +YI  F  
Sbjct: 4   FSFGQILANLLLAARWTVVLSIVSFLSGGIVGLAVLVM-RVSGSRLLRGCAKVYIEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +   F  P+L            P +++    L+ +T+A++AEI R  +
Sbjct: 61  QGTPLLMQLFIVF---FGLPLL--------GFDVPPWVAATAGLTFFTSAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP+GQ EA+ +L +++ +  R V+LPQA R  + P     +  +K+++L   +GF +L
Sbjct: 110 EAVPKGQWEASASLAMSYVEQLRHVILPQAARIAVAPTVGFGVQAVKDTALVSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              G  I N T +   +  +   IY +L   +  +   L  +
Sbjct: 170 TKAGIAISNATFRPFVVYGLVALIYFALCYPLTRYARTLQRR 211



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+    T  L+    +   I+G  V   R+S ++L+    +VY+EVF+  P L+ +F +
Sbjct: 13  LLLAARWTVVLSIVSFLSGGIVGLAVLVMRVSGSRLLRGCAKVYIEVFQGTPLLMQLFIV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  +  +       +    G+                 A
Sbjct: 73  FFGLPLLGFDVPPWVAATAGLTFFTSAYLAEIWRGCVEA 111


>gi|307704348|ref|ZP_07641265.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|307622108|gb|EFO01128.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 225

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L + L +    +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMFLGILFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLIILPQAFRIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y SL   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFSLCFPVAQFGRKMEQ 217



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A  +G L GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMFLGILFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|299069325|emb|CBJ40591.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CMR15]
          Length = 233

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 5/232 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +  N          +     I   S+VLG+ L+     L    H    + +       
Sbjct: 7   MAILKNPEFSRMLIEGVWMTLVIAGCSWVLGMALAFVLLALRMVPHPLAERFVGA---YV 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                +PTLV +   Y        L   +++G      E +   +AL    AA+ +E +R
Sbjct: 64  SYHCNVPTLVQLMFWYFGISTLLPLPALDWLGE--HHSEVVFAIVALGLCQAAYFSEDLR 121

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SGL A+P GQ EAA ALG T     R VLLPQA+R+ +P L +  ++L KNSSLA+A+G 
Sbjct: 122 SGLRAIPPGQEEAARALGNTFIGTLRYVLLPQAVRNALPALINHSVSLFKNSSLAMAIGV 181

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++      I N + +A E  L+   +YL  S++I      L  +  +   +
Sbjct: 182 TEMTHAVKEIENASFRAFESYLLATLMYLGFSLVIMAVGACLARRFRVVTGR 233



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
              ++    +  ++  ++ G   T  +A    +    +  ++ A R+  + L       Y
Sbjct: 3   GFDLMAILKNPEFSRMLIEGVWMTLVIAGCSWVLGMALAFVLLALRMVPHPLAERFVGAY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           V    N+P LV + F Y  + ++LP+P    
Sbjct: 63  VSYHCNVPTLVQLMFWYFGISTLLPLPALDW 93


>gi|28870094|ref|NP_792713.1| glutamine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28853340|gb|AAO56408.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 233

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +          +   + + L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTVQLAFVAWCMAMAVALLLVSIRLTGNMYAERLVAGYVSYH-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   I  S  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLAIS 213



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ N     +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTVQLAFVAWCMAMAVALLLVSIRLTGNMYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLSESTQIWLSGYS 98


>gi|327395224|dbj|BAK12646.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Pantoea ananatis AJ13355]
          Length = 308

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 1/263 (0%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +V +F L   V SV   P     +    F +   L     T+       VFS + 
Sbjct: 17  RTLGAVVALFILAGVVQSVAFNPRWEWGVFARWFFDPVILHGLGQTLLLTLLGTVFSLLF 76

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FN 255
           G VL+L     S          + L      ++  +       L   L    P     + 
Sbjct: 77  GGVLALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTSLSWG 136

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 V  +F +  I L+   AA+ AEI+R G + V  GQ+EAA ALGL+  + T  ++
Sbjct: 137 HFQTINVLGQFPAAVIGLTLVQAAYSAEIIRGGFLGVDHGQVEAASALGLSASRRTFRII 196

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R+IIP   ++ ++L K +++   +   +L      I N+  + I ++++    YL
Sbjct: 197 LPQALRAIIPTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYL 256

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++++  + +   +A    +
Sbjct: 257 IITTVLSVIQHSVERWLARSVSR 279


>gi|17548126|ref|NP_521528.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17430433|emb|CAD16906.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 223

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 96/229 (41%), Gaps = 14/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +      L           ++ V SF+L  V+ L    L R    K   A     ++  
Sbjct: 6   FLEHAREFLPILLQGAVVTVEVTVLSFLLSSVIGLAL-ALMRLSPIKAVSAAGATIVN-- 62

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP +V +   Y           F           F +  I L    +A+ AE  R+
Sbjct: 63  IIRGLPIIVQLFYIY-----------FVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV  GQ EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A
Sbjct: 112 GIEAVDPGQREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVA 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++   G  I + T Q + +  +   +YL +S+ +   + RL  ++    
Sbjct: 172 EMTRAGQLIASSTFQNMTVYTLVALLYLLMSLPLVFGLRRLERRMGAGR 220



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +     + +++IG  +   RLS  K V+      V + R +P +V +F++
Sbjct: 17  LLQGAVVTVEVTVLSFLLSSVIGLALALMRLSPIKAVSAAGATIVNIIRGLPIIVQLFYI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +            G+ +               A
Sbjct: 77  YFVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEA 115


>gi|237799096|ref|ZP_04587557.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331021950|gb|EGI02007.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 229

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  K
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVK 225



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|170690740|ref|ZP_02881906.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143989|gb|EDT12151.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 218

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L      ++    I     + G ++ + A    R +       +  +Y+
Sbjct: 1   MEFDWTVIWSALPDLIDGVELTVFIAFVGLIGGFIVGVVAGT-CRAYGPLALNVIAQVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +     L+F  P+L      G         +  IA++  + A++AE+
Sbjct: 60  E--LIRGTPIVVQVMF---LYFALPLLAHLRIDG-------LTAAIIAITVNSGAYLAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++P+G MEA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +
Sbjct: 108 VRGALLSIPKGLMEAGLAMGLSTPRVLMKIIGPLAFRRLIPPLGNQCIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  II    +A+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 168 GVGELTRKGQEIIASNFRAVEIWSAVAVIYLVLTGVMTLSLRVVERRMRI 217


>gi|89893485|ref|YP_516972.1| hypothetical protein DSY0739 [Desulfitobacterium hafniense Y51]
 gi|89332933|dbj|BAE82528.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 217

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 13/190 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R       + L  +Y+  F   G   LV +   + ++F  P+L            P  
Sbjct: 40  FGRLSKYPPLRFLAAVYVEAF--RGTSLLVQL---FWIYFALPIL--------GISLPPL 86

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L     A+ +E+VRS ++AVP+GQ EA IAL  +  +  R ++LPQA   ++P 
Sbjct: 87  TAGVLTLGLNCGAYGSEVVRSAILAVPKGQTEAGIALNFSPWQRMRRIILPQAFVMMLPG 146

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  + LLK++SL   +  ADL      +   T +   I  + + IY  ++  +   + 
Sbjct: 147 FGNLQIELLKSTSLVSLITLADLTYQASVLNASTMETTLIYSLLLVIYFLIAWPLTRGIR 206

Query: 387 RLNAKIALKE 396
            +  ++ +  
Sbjct: 207 WIENRLTVGR 216



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 34/66 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +     + A ++  L G GRLS    + ++  VYVE FR    LV +F+
Sbjct: 12  ALLKGLEITLIITLLATLLALVLAFLAGFGRLSKYPPLRFLAAVYVEAFRGTSLLVQLFW 71

Query: 148 LYKSVL 153
           +Y ++ 
Sbjct: 72  IYFALP 77


>gi|308174444|ref|YP_003921149.1| glutamine ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307607308|emb|CBI43679.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens
           DSM 7]
          Length = 214

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 20/209 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 SF LG+++++           +     P+ +I T  +  +  + L+ + +  +F
Sbjct: 25  FIALAGSFALGVLIAVM----------RITAFKPIQWIGTAYVEFIRNIPLLLITFVFYF 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P                F +  IAL+ YT+AFIAE +R+G+  V +GQMEAA + G T
Sbjct: 75  GLP--------NAGLRLDGFQAGTIALTIYTSAFIAEAIRAGIQTVSKGQMEAARSSGFT 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +A R V+LPQA++ +IPPL +Q+LNL+KNSS+   V   DL+     + + T    ++
Sbjct: 127 YSQAMRYVILPQAVKIVIPPLGNQFLNLVKNSSILGVVAGLDLMYQADLVSSSTLVVFDV 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                  YL L+I +++ ++ L  ++   
Sbjct: 187 F--VALFYLMLTIPLSIGVHYLERRLGKS 213



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF++T   +F  +  +  +G L+   R++A K + WI   YVE  RNIP L++ F  Y  
Sbjct: 16  GFLHTLLASFIALAGSFALGVLIAVMRITAFKPIQWIGTAYVEFIRNIPLLLITFVFYFG 75

Query: 152 VLSV 155
           + + 
Sbjct: 76  LPNA 79


>gi|271500710|ref|YP_003333735.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344265|gb|ACZ77030.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 214

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 18/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + S +LG++ ++      R       + L LLYI  F   G P L+ +   Y    
Sbjct: 24  VAAIIGSTLLGLLAAVL-----RTSRLPIARQLALLYIELF--RGTPVLITLMFIY---- 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           F +  + LS Y  A+IAE+ R+G+ AVP+GQ E +  LGL+
Sbjct: 73  -------FGVAYFGYDINLFAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGLS 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+    V+LPQ    ++PPLT QYL+L+K++S+   +G ++L+  G  I+++ GQ + I
Sbjct: 126 KRQTFLSVILPQTRGIVLPPLTGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPVII 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             +   +Y ++   ++ ++    A+
Sbjct: 186 YGLVALLYFAVCFPLSRWVQHHQAR 210



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 3/102 (2%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           + + +I +T++G L    R S   +   +  +Y+E+FR  P L+ + F+Y  V       
Sbjct: 23  SVAAIIGSTLLGLLAAVLRTSRLPIARQLALLYIELFRGTPVLITLMFIYFGVAYFGYDI 82

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGI 198
           +       G+ +               A     +  S++LG+
Sbjct: 83  NLFAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGL 124


>gi|72161211|ref|YP_288868.1| amino acid ABC transporter permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thermobifida fusca YX]
 gi|71914943|gb|AAZ54845.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thermobifida fusca YX]
          Length = 327

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 14/277 (5%)

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD---HSIVLPFGMFLNNRGLSFPTLTMD 184
           +  +Y+   R++       F  ++                        +  +     T+ 
Sbjct: 34  LAIIYLGFNRSLGEGAPPLFSAEAWAVNPNGQWAAVRWQPFIDPATWTDYVIPGLLNTLT 93

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V + V G+V  +   RLS H   +      + +       G+P L+LI     L
Sbjct: 94  AALWAAVLALVFGLVFGIA--RLSDHAWIRIPAGAVVEF-----FRGIPLLMLIFFAMAL 146

Query: 245 HFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                 +     +              ++ I L+ Y  + +AE+ R+G+ AVP+GQ EAA
Sbjct: 147 PLAVNQVRPLLGLPPLQPGTFQVSALAAVVIGLTLYNGSVLAEVFRAGINAVPKGQSEAA 206

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LG+   +    +L+PQA+RS++P + +Q + LLK+++L   + F +L+     I  + 
Sbjct: 207 YSLGMNKVQVMWWILIPQAVRSMMPAIVAQLVILLKDTALGYIIAFPELLRSFSLIGTRY 266

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  I   LI   IY++++I ++     L  + A   K
Sbjct: 267 GNVIPAALICAVIYIAINISLSRLAIWLEKRNARSSK 303



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 2/137 (1%)

Query: 22  MRVHNISVQIILAL--LLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPY 79
            R+ +    ++  +   + +  ++   N         L     +     G        P+
Sbjct: 15  ARIRHAVYTVLTLVGFFVVLAIIYLGFNRSLGEGAPPLFSAEAWAVNPNGQWAAVRWQPF 74

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
              +++   ++ G +NT   A    + A + G + G  RLS +  +       VE FR I
Sbjct: 75  IDPATWTDYVIPGLLNTLTAALWAAVLALVFGLVFGIARLSDHAWIRIPAGAVVEFFRGI 134

Query: 140 PPLVVIFFLYKSVLSVL 156
           P L++IFF     L+V 
Sbjct: 135 PLLMLIFFAMALPLAVN 151


>gi|308183090|ref|YP_003927217.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           PeCan4]
 gi|308065275|gb|ADO07167.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           PeCan4]
          Length = 240

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L      +HF  KT       Y+S  LI G P LV I + + 
Sbjct: 44  PLAIISFILGLFIAVFVALIKIAPPKHFIHKTLLVGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|17549155|ref|NP_522495.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17431406|emb|CAD18085.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 233

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 5/232 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +  N          +     I   S+VLG+ L+     L R       +     Y+S 
Sbjct: 7   MAILKNPEFSRMLIEGVWMTLVIAGCSWVLGMALAFVLLAL-RMVPNPLAERFVGAYVS- 64

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                +PTLV +   Y        L   +++G      E +   +AL    AA+ +E +R
Sbjct: 65  -YHCNVPTLVQLMFWYFGISTLLPLPALDWLGE--HHSEVVFAIVALGLCQAAYFSEDLR 121

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SGL A+P GQ EAA ALG T     R VLLPQA+R+ +P L +  ++L KNSSLA+A+G 
Sbjct: 122 SGLRAIPPGQEEAARALGNTFIGTLRYVLLPQAVRNALPALINHSVSLFKNSSLAMAIGV 181

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++      I N + +A E  L+   +YL  S++I      L  +  +   +
Sbjct: 182 TEMTHAVKEIENASFRAFESYLLATLMYLGFSLVIMAVGACLARRFRVVTGR 233



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
              ++    +  ++  ++ G   T  +A    +    +  ++ A R+  N L       Y
Sbjct: 3   GFDLMAILKNPEFSRMLIEGVWMTLVIAGCSWVLGMALAFVLLALRMVPNPLAERFVGAY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           V    N+P LV + F Y  + ++LP+P    
Sbjct: 63  VSYHCNVPTLVQLMFWYFGISTLLPLPALDW 93


>gi|83747887|ref|ZP_00944919.1| Hypothetical Protein RRSL_03143 [Ralstonia solanacearum UW551]
 gi|207739277|ref|YP_002257670.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725420|gb|EAP72566.1| Hypothetical Protein RRSL_03143 [Ralstonia solanacearum UW551]
 gi|206592650|emb|CAQ59556.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 250

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 10/211 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +   VLGI L+   + L      +     PL    T L++ +  + L+     ++F
Sbjct: 30  IACTLILSVLGIGLAFPLSVL--LALARLSPWRPLHASVTALVYVVRGVPLLMWILWVYF 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   N  G       F ++   L  Y   +++E+VR+G+ A+P+GQMEAA ALG +
Sbjct: 88  LVPLLIGSNVSG-------FTTMVCTLVIYEGVYLSEVVRAGIEALPKGQMEAARALGHS 140

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           +  A RLV+LPQA+ +++P + +Q+++ +K ++L   +   +L      I N    +  +
Sbjct: 141 YFGAMRLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQ 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I  +   IY  +   +      L  +IA K 
Sbjct: 201 IFFMLAVIYFVVCWSLTRTARALEHRIAAKR 231



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+  G+  A  +  L+   RLS  + +       V V R +P L+ I ++Y
Sbjct: 27  LGGIACTLILSVLGIGLAFPLSVLLALARLSPWRPLHASVTALVYVVRGVPLLMWILWVY 86

Query: 150 KSVL 153
             V 
Sbjct: 87  FLVP 90


>gi|107023342|ref|YP_621669.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116690425|ref|YP_836048.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170733745|ref|YP_001765692.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|206560949|ref|YP_002231714.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|105893531|gb|ABF76696.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116648514|gb|ABK09155.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169816987|gb|ACA91570.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|198036991|emb|CAR52912.1| histidine transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 229

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 80/175 (45%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T LI G+P LVL+ L +        +              F++  + L     A+  E
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQIDIDPFLAGVLVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   
Sbjct: 112 TFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     LI   +YL+++ +    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAITTISNFVLMWLEKRYSTGVRK 226


>gi|262282196|ref|ZP_06059965.1| amino acid ABC transporter permease [Streptococcus sp. 2_1_36FAA]
 gi|262262650|gb|EEY81347.1| amino acid ABC transporter permease [Streptococcus sp. 2_1_36FAA]
          Length = 269

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 107/256 (41%), Gaps = 9/256 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV++   +   L        +  L        R +     T+       +F  VL ++ +
Sbjct: 5   LVILASNWYQELMKSIPDGQNFSLRSVFDALPRIIEKLPTTLFLTLGGALFGLVLALIFA 64

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQ-FNFIGG 259
           +      +  +       P+  +    + G P LV + L  Y +     V+ Q F     
Sbjct: 65  IVKINRVKVLY-------PIQALFVSFLRGTPILVQLMLTYYGIPIALKVINQRFGTAFN 117

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P  +   +A +   AA+ +E +R+ +++V  G++EAA +LG+T+ +  R V++P A
Sbjct: 118 INAIPASIFAVVAFAFNEAAYASETIRAAILSVSEGEIEAARSLGMTNAQVYRRVIIPNA 177

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
                P L +  + L K +SLA + G  ++ +    +     +  E  +    +Y  ++I
Sbjct: 178 AVVATPTLINSLIGLTKGTSLAFSAGVVEVFAQAQILGGSDYRYFERFISVALVYWVVNI 237

Query: 380 MIALFMNRLNAKIALK 395
           MI  F   +  K+A++
Sbjct: 238 MIEQFGRFIERKMAIQ 253


>gi|317053915|ref|YP_004117940.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951910|gb|ADU71384.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 227

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 92/183 (50%), Gaps = 4/183 (2%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              + G  +   Y+  F   G P L+ I + Y      P + +  F     +   +    
Sbjct: 42  RQNRAGSYVARFYVWLF--RGTPLLIQIFMIYYGLGSLPAVRESIF--WPLLRDPYWCGL 97

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL    AA+ +EI+R GL AV    +EAA   G++     R + LP A+R  +P  +++
Sbjct: 98  IALILNDAAYTSEILRGGLNAVSVQSLEAAKVCGMSRFTTLRRITLPIAIRQALPAYSNE 157

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++++K++SL   +   ++  +  +I+++T +A+E+ L    IYL L+++++  +  L  
Sbjct: 158 IISMIKSTSLVSTISLMEMTGIADSIVSETFRALEVFLSAAIIYLLLTVLVSKGVALLER 217

Query: 391 KIA 393
           +++
Sbjct: 218 RLS 220


>gi|170745094|ref|YP_001766551.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170658695|gb|ACB27749.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 227

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S ++  V  L    L +       +AL   Y+    I G PTL+ + + Y  
Sbjct: 30  VVLGVTVASILVSWVCGLLG-ALGKRSSFAPFRALASFYVWF--IRGTPTLIQVFIVY-- 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F             +  IAL   + A++AE +R+GL A+PRGQ+E+A+ALG
Sbjct: 85  ---------FGMPQIGVKLSPVTAGIIALGVSSGAYVAETIRAGLAAIPRGQVESALALG 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +  R     ++LPQ  R I+P LT++ ++ +KN+SL   +   +L      +I  T +  
Sbjct: 136 MNPRIMMVRIVLPQVFRMILPSLTNEAISAVKNTSLLSTITVVELTLYAQLMIATTFRPF 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +    IYL L+ +++        + A 
Sbjct: 196 DFYIAAALIYLGLTSILSQLSAYFERRYAR 225



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y    L   +    +  + ++ + + G L   G+ S+      +   YV   R  P L+
Sbjct: 19  TYGPGFLSATLVVLGVTVASILVSWVCGLLGALGKRSSFAPFRALASFYVWFIRGTPTLI 78

Query: 144 VIFFLYKSVLSV 155
            +F +Y  +  +
Sbjct: 79  QVFIVYFGMPQI 90


>gi|167743406|ref|ZP_02416180.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 14]
          Length = 316

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 42  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGS 260
           L     S          + L      ++  L    L  L   +    P     F  +  +
Sbjct: 102 LARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFAEVATT 161

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAM
Sbjct: 162 DLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAM 221

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 222 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 281

Query: 381 IALFMNRLNAKIALKEKK 398
           +++   ++  + A    +
Sbjct: 282 LSIVQAQVERRYARGAVR 299


>gi|92114901|ref|YP_574829.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91797991|gb|ABE60130.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 243

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 5/235 (2%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
               + +L          L +    +    ++   S V+G++L++    ++R    K  K
Sbjct: 5   NAWFTELLADNAIFTANTLGYYLDGLGNTVRLVFLSLVIGLLLAVPL-AIARGSRRKWIK 63

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                Y  T++  G P L+ + + Y        +   + I    +   F    IA +  T
Sbjct: 64  WPVFFY--TYVFRGTPLLIQLYMIYYGVVFIEGIQ--DTILWVVLKDAFFPALIAFTLNT 119

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+  EI    + A  RG++EAA A G++     R ++LP A R  +P   ++ + +L  
Sbjct: 120 AAYTTEIFHGAIKATSRGEIEAARAYGMSRGLMMRRIILPSAFRRALPAYGNEVIFMLHA 179

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S++A  V   DL      +  +     +  L    IYL L+  I      L  K+
Sbjct: 180 SAIASVVTIMDLTGAARFVYARFYAPFDAFLFVAAIYLCLTFAILYLFRYLEKKL 234



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G  NT  L F  ++   ++   +   R S  K + W    Y  VFR  P L+ ++ 
Sbjct: 25  YYLDGLGNTVRLVFLSLVIGLLLAVPLAIARGSRRKWIKWPVFFYTYVFRGTPLLIQLYM 84

Query: 148 LYKSVL 153
           +Y  V+
Sbjct: 85  IYYGVV 90


>gi|326381366|ref|ZP_08203060.1| ABC transporter substrate-binding/permease protein [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326199613|gb|EGD56793.1| ABC transporter substrate-binding/permease protein [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 581

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 16/243 (6%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                     G              +    KI + S +LG +  +    ++     +  +
Sbjct: 350 WAQLQETFFNGEQFRKALPELFKTGLPNTLKIALTSGILGTIGGMLL-AMAGMSRTRWLR 408

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
               +Y   F        V++ L   L F          +   T    F    +AL+   
Sbjct: 409 WPARVYTDVFRGLPA---VVVILMVGLGFG-------PIVKNLTGGNPFWLGSVALALLA 458

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+I EI R G+ +V  GQMEAA ALG +H  + RLV++PQ +R ++P L +Q++ L+K+
Sbjct: 459 AAYIGEIFRFGIQSVESGQMEAARALGFSHHSSMRLVVIPQGVRRVLPALVNQFIVLIKD 518

Query: 338 SSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           SSL   +G      DL +VG      +G  +  ++    +YL +++ +   +N ++ ++ 
Sbjct: 519 SSLIYFLGLTLLQRDLFAVGKDFNANSGN-LTPLVAAGLLYLVMTVPLTHLVNYIDNRLR 577

Query: 394 LKE 396
             +
Sbjct: 578 TGK 580


>gi|254712480|ref|ZP_05174291.1| amino acid ABC transporter, permease protein [Brucella ceti
           M644/93/1]
 gi|254715553|ref|ZP_05177364.1| amino acid ABC transporter, permease protein [Brucella ceti
           M13/05/1]
          Length = 226

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 44  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R+ + +VP+GQ EAA  +G++ R+A    +LPQA R+ +PPL
Sbjct: 91  AALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYFIGMSWRQALIRTILPQATRTAVPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS +++    R
Sbjct: 151 SNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILSALQVR 210

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 211 LERRFGRY 218



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 9   ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 69  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 99


>gi|184158820|ref|YP_001847159.1| arginine ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|260554425|ref|ZP_05826646.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
 gi|294843461|ref|ZP_06788144.1| ABC-type arginine transport system, permease component
           [Acinetobacter sp. 6014059]
 gi|183210414|gb|ACC57812.1| ABC-type arginine transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|260410967|gb|EEX04264.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
          Length = 229

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 9/224 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S ++G++ +      S+  + K  + +   Y  T LI  +P L
Sbjct: 11  LSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSNIKALRYIATAY--TTLIRSVPDL 63

Query: 236 VLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V++ L +  L      + +   +    ++P F++  I L+    A+  E  R    +VPR
Sbjct: 64  VIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA+A G+T  +    VL PQ MR  +P + + +  L+K ++L   +G  D+V +  
Sbjct: 123 GQIEAAMAYGMTPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQ 182

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                T Q     ++   IYL+++ +  L +  L    +   +K
Sbjct: 183 DAGRSTMQLFFFSIVAAAIYLAITTVSNLILIWLERHYSAGVRK 226


>gi|71734118|ref|YP_275674.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298488143|ref|ZP_07006180.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71554671|gb|AAZ33882.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157422|gb|EFH98505.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320323222|gb|EFW79310.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320329747|gb|EFW85736.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330881452|gb|EGH15601.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330889203|gb|EGH21864.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. mori str. 301020]
 gi|330960459|gb|EGH60719.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. maculicola str. ES4326]
 gi|330988692|gb|EGH86795.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. lachrymans str. M301315]
          Length = 229

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|261252932|ref|ZP_05945505.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260936323|gb|EEX92312.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 365

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 117/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     ++        +T+       V S  +G+
Sbjct: 118 TPKRLWIWLFFVNIYPFIIAALLYGGVFGLEVVDTHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 ALAL-----GRRSEMPIIRSMCTVYIEVWRGVPLITVLFMA----------SVMLPLFLA 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   + +  ++AA++AE+VR GL A+P+GQ EAA ALGLT+ K   L++LPQ
Sbjct: 223 EGSETDKLIRALVGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLTYWKKMGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 33/66 (50%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ +  IG  +  GR S   ++  +C VY+EV+R +P + V+F   
Sbjct: 155 WGGLLVTLIIALVGIVVSLPIGVALALGRRSEMPIIRSMCTVYIEVWRGVPLITVLFMAS 214

Query: 150 KSVLSV 155
             +   
Sbjct: 215 VMLPLF 220


>gi|77461682|ref|YP_351189.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77385685|gb|ABA77198.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 216

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L      +     + + +F+ G ++ L    + R        ++   +I  F  
Sbjct: 4   FTFWDILRNLLTGLQWTLALSLVAFIGGGIVGLLIL-IMRISKNPLPSSIARTWIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           +M+  IAL+ +T+A++AEI R  +
Sbjct: 61  QGTPLLMQLFLVF-----------FGVALAGVEISPWMAAAIALTLFTSAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ EA+ +L L   +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 110 EAIPHGQWEASSSLALNPLEQLRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              GG + N T +   +  +    Y  L   ++L    L  ++
Sbjct: 170 TKTGGMLANATFEPFMVYGLVALGYFLLCYPLSLSARYLERRL 212



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 38/106 (35%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L G   T  L+    I   I+G L+   R+S N L + I R ++E+F+  P L
Sbjct: 7   WDILRNLLTGLQWTLALSLVAFIGGGIVGLLILIMRISKNPLPSSIARTWIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + +F ++  V          +     + L               A 
Sbjct: 67  MQLFLVFFGVALAGVEISPWMAAAIALTLFTSAYLAEIWRGCVEAI 112


>gi|219666812|ref|YP_002457247.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Desulfitobacterium hafniense DCB-2]
 gi|219537072|gb|ACL18811.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Desulfitobacterium hafniense DCB-2]
          Length = 214

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 13/190 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R       + L  +Y+  F   G   LV +   + ++F  P+L            P  
Sbjct: 37  FGRLSKYPPLRFLAAVYVEAF--RGTSLLVQL---FWIYFALPIL--------GISLPPL 83

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L     A+ +E+VRS ++AVP+GQ EA IAL  +  +  R ++LPQA   ++P 
Sbjct: 84  TAGVLTLGLNCGAYGSEVVRSAILAVPKGQTEAGIALNFSPWQRMRRIILPQAFVMMLPG 143

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  + LLK++SL   +  ADL      +   T +   I  + + IY  ++  +   + 
Sbjct: 144 FGNLQIELLKSTSLVSLITLADLTYQASVLNASTMETTLIYSLLLVIYFLIAWPLTRGIR 203

Query: 387 RLNAKIALKE 396
            +  ++ +  
Sbjct: 204 WIENRLTVGR 213



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 34/66 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +     + A ++  L G GRLS    + ++  VYVE FR    LV +F+
Sbjct: 9   ALLKGLEITLIITLLATLLALVLAFLAGFGRLSKYPPLRFLAAVYVEAFRGTSLLVQLFW 68

Query: 148 LYKSVL 153
           +Y ++ 
Sbjct: 69  IYFALP 74


>gi|259418369|ref|ZP_05742287.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
 gi|259345764|gb|EEW57608.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
          Length = 224

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 13/230 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS---RHFHEKTGKALPLLYISTFL 228
           N   +      +     + +F  V+G+  +L    +    R F       +  L+IS F 
Sbjct: 5   NLEYMWDLVPILLGYVPLTLFMAVVGMACALVLASILAVERVFQIPVLDGVVRLFISFF- 63

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P LV + L Y   +  P +  F             +  + L+ + +A++AE +R+ 
Sbjct: 64  -RGTPLLVQLFLFY---YGLPQVLSF-----LGTINGVTATIMGLTLHFSAYMAESIRAA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V R Q EAA A+G+T  +  R ++LPQA R   P L + +++++K +SLA  +G  +
Sbjct: 115 ILGVDRSQWEAAQAVGMTQGQMMRQIILPQAARVAAPTLVNYFIDMIKGTSLAFTLGVTE 174

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+         +    E  L+   IY  +   ++     L   +     +
Sbjct: 175 LMGATQKEAAGSFLYFEAFLVAAAIYWGIVEALSYGQRHLETYLNKAHAR 224



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++A  GM  A ++ +++   R+    ++  + R+++  FR  P LV +F  Y  +  V
Sbjct: 23  TLFMAVVGMACALVLASILAVERVFQIPVLDGVVRLFISFFRGTPLLVQLFLFYYGLPQV 82


>gi|153839325|ref|ZP_01991992.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AQ3810]
 gi|260366018|ref|ZP_05778496.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus K5030]
 gi|260898003|ref|ZP_05906499.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus Peru-466]
 gi|149747157|gb|EDM58145.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AQ3810]
 gi|308088044|gb|EFO37739.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus Peru-466]
 gi|308114204|gb|EFO51744.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus K5030]
 gi|328473626|gb|EGF44461.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 365

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       V S  +G+
Sbjct: 118 TPKRLWIWLFFVNIYPFIVAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 ALAL-----GRRSDMPIIRSICTIYIEVWRGVPLITVLFMA----------SVMLPLFLA 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++LPQ
Sbjct: 223 EGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG  +  GR S   ++  IC +Y+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVALALGRRSDMPIIRSICTIYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSV 155
           +   
Sbjct: 217 LPLF 220


>gi|83648450|ref|YP_436885.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83636493|gb|ABC32460.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 365

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 126/266 (47%), Gaps = 16/266 (6%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            I  L++     K  +++  +    I+  F ++    GL            + +    +G
Sbjct: 110 GIVALMIDKTPKKGWIALFMLVIFPIIAYFLLYGGAFGLEVVETHKWGGLTLTLVIATVG 169

Query: 198 IVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           IV+SL    A  L R       K++ ++YI  +    L T++ +A           +   
Sbjct: 170 IVVSLPIGVALALGRRSEMPIVKSISVVYIEFWRGVPLITVLFMA----------SVMLP 219

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            F+   T + + +   I +  + +A++AE+VR GL A+P+GQ EAA +LGL++ K    +
Sbjct: 220 LFMSEGTETDKLVRAMIGVIMFQSAYMAEVVRGGLQAIPKGQYEAAHSLGLSYWKMMFFI 279

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWM 371
           +LPQA++ +IP + + ++ L K++SL + +G  DL+++  + ++     G ++E  +   
Sbjct: 280 ILPQALKLMIPGIVNTFIALFKDTSLVLIIGLFDLLAIVQSALHDPKWLGFSVEGYIFVA 339

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
           F++      ++ +   L  K+    +
Sbjct: 340 FLFWVFCFGMSRYSQALERKLNTSHR 365



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 10/198 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  +A  G++ +  IG  +  GR S   +V  I  VY+E +R +P + V+F     
Sbjct: 158 GLTLTLVIATVGIVVSLPIGVALALGRRSEMPIVKSISVVYIEFWRGVPLITVLFMASVM 217

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   +     +  L   M       S     +       +    +     + LS +    
Sbjct: 218 LPLFMSEGTETDKLVRAMIGVIMFQSAYMAEVVRGGLQAIPKGQYEAAHSLGLSYWKMMF 277

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL------HFDKPVLGQFNFIGGST 261
                +     +P +  +   +F   +LVLI   + L          P    F+  G   
Sbjct: 278 FIILPQALKLMIPGIVNTFIALFKDTSLVLIIGLFDLLAIVQSALHDPKWLGFSVEGYIF 337

Query: 262 VSPEFMSLYIALSCYTAA 279
           V+  F      +S Y+ A
Sbjct: 338 VAFLFWVFCFGMSRYSQA 355


>gi|238793404|ref|ZP_04637029.1| Glutamine transport system permease protein glnP [Yersinia
           intermedia ATCC 29909]
 gi|238727177|gb|EEQ18706.1| Glutamine transport system permease protein glnP [Yersinia
           intermedia ATCC 29909]
          Length = 189

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 103/205 (50%), Gaps = 17/205 (8%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +   ++G++        +R +     + + L++I   LI G P +V +   Y   F  P
Sbjct: 1   MLGGLIIGVIAGF-----ARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FALP 50

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++              F +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R 
Sbjct: 51  MMM-------PVRIDPFSAAVVTIIINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRD 103

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ P A+R ++PPL +Q++  +K++SL + +G A+L   G  II    +A+EI   
Sbjct: 104 TLRYVIAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSA 163

Query: 370 WMFIYLSLSIMIALFMNRLNAKIAL 394
              IYL +++ ++  + RL  K+ +
Sbjct: 164 VAVIYLIITLALSFVLRRLERKLKI 188


>gi|212697319|ref|ZP_03305447.1| hypothetical protein ANHYDRO_01887 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325848996|ref|ZP_08170506.1| putative arginine ABC transporter, permease protein ArtQ
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|212675768|gb|EEB35375.1| hypothetical protein ANHYDRO_01887 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325480640|gb|EGC83702.1| putative arginine ABC transporter, permease protein ArtQ
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 235

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 105/229 (45%), Gaps = 20/229 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-------LYI 224
               +     T+       + + + G+ +++             G  + L       L I
Sbjct: 18  YKYLIDGLKTTLSVTLISLILALIFGMTIAIIKDYDKNLDKNDKGLKVTLIKILSKILNI 77

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P+ + + + Y +               +     F+   +  +  ++A+++E+
Sbjct: 78  FVTIVRGTPSTIQLLIIYNVIL-------------ANTDSLFLVAVVTFTINSSAYMSEV 124

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ +V +G++EAA +LGL++ K  +LV++PQAM++ +P L ++ + L K +S++  +
Sbjct: 125 FRGGINSVDKGEIEAARSLGLSYEKTAKLVVIPQAMKNSLPALGNEVITLFKETSISGFI 184

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  DL    G II++T  A    L    IYL + +++     +L  ++A
Sbjct: 185 GLVDLTRGAGIIISRTFSAAIPYLAAALIYLLVVLLLEKIFKKLEERMA 233



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 31/88 (35%), Gaps = 14/88 (15%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN--------------KLVAW 127
             +    ++ G   T  +    +I A I G  +   +                  K+++ 
Sbjct: 14  QDNNYKYLIDGLKTTLSVTLISLILALIFGMTIAIIKDYDKNLDKNDKGLKVTLIKILSK 73

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           I  ++V + R  P  + +  +Y  +L+ 
Sbjct: 74  ILNIFVTIVRGTPSTIQLLIIYNVILAN 101


>gi|187934602|ref|YP_001885296.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium botulinum B str. Eklund 17B]
 gi|187722755|gb|ACD23976.1| glutamine ABC transporter, permease/substrate-binding protein
           [Clostridium botulinum B str. Eklund 17B]
          Length = 213

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 106/228 (46%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + L  + L    +T++      + S  LGIV++L  T       + TG       I
Sbjct: 1   MNYILSLMPQILEGLKVTLEVFVLTLILSIPLGIVVALARTSKILMLRKLTG-------I 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ I + +           F           F +  +A     AA+  EI
Sbjct: 54  YVLIMRGTPLLLQIVVIF-----------FGLPTMGITFDRFTAAILAFVLNYAAYFGEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+I++ +GQ EAA  LGLT +     ++LPQA++ +IPP+ ++   L+K++SL   +
Sbjct: 103 FRSGIISIDKGQYEAAEMLGLTSKDTFFRIILPQAIKRVIPPVANEITTLIKDTSLVYII 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +L+ +     N+    I  +++   +YL +  +++  + ++  K 
Sbjct: 163 GLDELLKIAKIASNRDVTLIP-LILAGAVYLVVIGILSKLLEKVEKKY 209



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    +I +  +G +V   R S   ++  +  +YV + R  P L+ I  +
Sbjct: 11  ILEGLKVTLEVFVLTLILSIPLGIVVALARTSKILMLRKLTGIYVLIMRGTPLLLQIVVI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + ++    D          LN 
Sbjct: 71  FFGLPTMGITFDRFTAAILAFVLNY 95


>gi|113866503|ref|YP_724992.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525279|emb|CAJ91624.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 227

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 6/229 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                +    L      M  + KI V + V+GIV       + R    +        Y++
Sbjct: 5   FDFTSITPATLEVLGEGMMVSLKITVTAVVVGIVWGTIL-AMMRLSSFRLLNWFAQGYVT 63

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F       LV++ L + L   + +   FN    + +     S  +A + + AA+ +EI+
Sbjct: 64  IFRSIP---LVMVLLWFFLIIPQVLQNLFNLSPATDLR--MTSALVAFALFEAAYYSEII 118

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V RGQM AA ALG+T+ ++ RLV+LPQA R+++P L +Q + L +++SL     
Sbjct: 119 RAGIQSVSRGQMFAAQALGMTYGQSMRLVILPQAFRNMVPLLLTQGIILFQDTSLVYVSA 178

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            AD       I  + G+ +E++L    +Y  +    +L + R   K+A+
Sbjct: 179 LADFFGQAYGIGERDGRIVEMLLFAGVVYFVICFSASLLVKRYQKKVAV 227



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 38/68 (55%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + +  +  + ++   + GT++   RLS+ +L+ W  + YV +FR+IP ++V+ +
Sbjct: 17  VLGEGMMVSLKITVTAVVVGIVWGTILAMMRLSSFRLLNWFAQGYVTIFRSIPLVMVLLW 76

Query: 148 LYKSVLSV 155
            +  +  V
Sbjct: 77  FFLIIPQV 84


>gi|157826658|ref|YP_001495722.1| amino acid ABC transporter permease [Rickettsia bellii OSU 85-389]
 gi|157801962|gb|ABV78685.1| Amino acid ABC transporter permease protein [Rickettsia bellii OSU
           85-389]
          Length = 218

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +   +  + F         K  V + + G+V+ +    L +    +  +     Y 
Sbjct: 1   MFEYLIKFSPKILFIVEGTLITLKYSVIAVIFGLVIGVLL-ALCKVNKNRALRLFADFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ +++ Y   F  P L    F         FM+  I+ S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLSIIY---FASPYLIGIKF-------TVFMAGAISFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EAA AL +      + ++LPQA+++I P LT++ +NL+K S++    
Sbjct: 108 IRAGINAVDKGQFEAAEALAIPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMF 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      +++    Y  L ++I+     +  K+
Sbjct: 168 GEMDLMKRAQIVSLETYNYFSPMIVAACCYYILVMLISFIARIIEKKL 215



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N+ +      Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLITLKYSVIAVIFGLVIGVLLALCKVNKNRALRLFADFYTSIFRGTPLLIQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|91227963|ref|ZP_01262073.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91188284|gb|EAS74582.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 365

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 121/274 (44%), Gaps = 16/274 (5%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            Y+ +      L       +  + +  +  +  ++   ++    GL            + 
Sbjct: 102 FYITLAMFTVLLAYEKTPKRMWIWLFFVNIYPFIIAGLLYGGVFGLEVVDTHKWGGLLVT 161

Query: 191 VFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           +   ++GIV+SL       L R       +++  +YI  +    L T++ +A        
Sbjct: 162 LIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLFMA-------- 213

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              +    F+   + + + +   I +  + +A++AE+VR GL A+P+GQ EAA ALGL++
Sbjct: 214 --SVMLPLFMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSY 271

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAI 364
            K T L++LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A 
Sbjct: 272 WKKTGLIILPQALKIAIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFAT 331

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +    ++      ++ +   L  K+    K+
Sbjct: 332 ESYVFVALVFWVFCFGMSRYSIWLENKLHTGHKR 365



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 77/196 (39%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG ++  GR S   ++  IC VY+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   +     +  L   +       S     +       +    +     + LS +    
Sbjct: 217 LPLFMSEGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTG 276

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +    A+P +  +   +F   +LVLI   +  L   +       ++G +T S  F
Sbjct: 277 LIILPQALKIAIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVF 336

Query: 267 MSLYIALSCYTAAFIA 282
           ++L   + C+  +  +
Sbjct: 337 VALVFWVFCFGMSRYS 352


>gi|15802854|ref|NP_288881.1| histidine transport, membrane protein M [Escherichia coli O157:H7
           EDL933]
 gi|25296580|pir||H85871 histidine transport, membrane protein M [imported] - Escherichia
           coli (strain O157:H7, substrain EDL933)
 gi|12516663|gb|AAG57436.1|AE005462_11 histidine transport, membrane protein M [Escherichia coli O157:H7
           str. EDL933]
          Length = 238

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G  L+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGXLALFL-AIGRVSSNKYIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA   G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARXYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|313897815|ref|ZP_07831356.1| arginine ABC transporter, permease protein ArtQ [Clostridium sp.
           HGF2]
 gi|312957350|gb|EFR38977.1| arginine ABC transporter, permease protein ArtQ [Clostridium sp.
           HGF2]
          Length = 218

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 106/229 (46%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +  R        +     + + S   G ++ L    L R    K    +   YI
Sbjct: 1   MNFDITVIERFWQLLLSGVPVILGLSLASAFFGTLIGLATVFLRRM--NKVFNLIVAAYI 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P  V +   Y   F  P L     I        +++  +  S  + A+++EI
Sbjct: 59  DLF--RGTPVYVQMFFIY---FGIPSLVPGLNINN------WVAGILVFSLNSGAYMSEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+  + +GQ+EAA ALG++ +   + +++PQA R+++P + ++++ L K +S+   +
Sbjct: 108 MRAGIDGIDKGQIEAAKALGVSGKDIGKDIIIPQAFRNVLPAVINEFITLTKETSIVSVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  D++     + NQT    E +LI   +Y  ++ +++L    +  K+ 
Sbjct: 168 GLHDMMYWFYAVKNQTYADFEPLLIVFLVYYIMNKVLSLIGKAIERKLK 216


>gi|229591449|ref|YP_002873568.1| putative amino acid ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229363315|emb|CAY50433.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 247

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +  +  I   +  L       +  L     T+   A   + +F  G++L+L         
Sbjct: 1   MFDMFSIVQQNWTLFLIGQYPHGPLGGLASTLILAALALLLAFPFGLLLALA-------- 52

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +      L  ++T  ++ L  + L+ + +  +F  P+L   N  G       FM++  
Sbjct: 53  --RVSPWKGLYLLATVWVYVLRGIPLLMVIFWTYFLVPLLIGHNITG-------FMTMLC 103

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  Y +A++ EI+R G+ A+P GQ EA+ ALGL + + T  V+LPQA+ + +P L SQ+
Sbjct: 104 TLVIYQSAYLCEIIRGGIQALPAGQYEASRALGLGYVRTTVWVILPQALYNALPSLISQF 163

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++++K +SL   +   ++      + NQ   +  ++  I   IY  L   +      +  
Sbjct: 164 ISIIKETSLGYVINVQEVTFAANQVNNQLLTKPFQVFFILAIIYYLLCFGLTRLAGWVEQ 223

Query: 391 KIALKE 396
           +IA K 
Sbjct: 224 RIARKR 229


>gi|289647198|ref|ZP_06478541.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 365

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGIAFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|254450652|ref|ZP_05064089.1| amino acid ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
 gi|198265058|gb|EDY89328.1| amino acid ABC transporter, permease protein [Octadecabacter
           antarcticus 238]
          Length = 207

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 5/207 (2%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            S VLG+ L++    L R   +         YI  F   G P LV I + Y        +
Sbjct: 2   LSGVLGLALAIVLM-LMRVSGKWYLDWPAQTYIYIF--RGTPILVQIFIVYYGFPQLEFI 58

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            +   I        F    +AL+  T A+++EI+R G++ V RG +EA  ALGL   +  
Sbjct: 59  RE--GILWPIFRDPFGCAIVALTLNTGAYVSEILRGGVLGVDRGILEAGEALGLNRCQRF 116

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             +  P A R  +P   +  ++LLK+++L   +  AD+  +  TI+ QT    EI +   
Sbjct: 117 TYLTTPIAARLALPAYGNDVISLLKSTALVSTITLADMTGIARTIVAQTYAPYEIFISLA 176

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            +Y+ +++ I   M R+   +     +
Sbjct: 177 IVYMIITLFIQKLMARIERWLGRYTVR 203


>gi|159899278|ref|YP_001545525.1| polar amino acid ABC transporter inner membrane subunit
           [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892317|gb|ABX05397.1| polar amino acid ABC transporter, inner membrane subunit
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 269

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 15/259 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R IP  +V   L  + +    I D      F               + T   +   SF+
Sbjct: 21  WRTIPWWLVAIGLIIAFMGFRIISDPEYTRIF---------ETILTGLGTTLMVTGISFI 71

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
             ++L      L R       + L + YI    I G+P LVLI          P L  + 
Sbjct: 72  CALIL-GLVLGLGRVSRNLILRNLSIGYIEF--IRGVPILVLIFTIS--FAIVPALSDWI 126

Query: 256 FIGGSTVSPEFMS-LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            I G  ++    +   IAL    AA+IAEI R+G+ ++ RGQMEAA +LG+TH +A R V
Sbjct: 127 TINGQKLTVSLTARAIIALVLIYAAYIAEIFRAGIESISRGQMEAARSLGMTHGQAMRYV 186

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R+++P L +  + +LK+SSL   +G  ++  V    ++ + +  E   I    Y
Sbjct: 187 ILPQAFRNVLPALGNDLIAILKDSSLVSVLGVREITQVSRLSVSSSFKYEETYFILTAFY 246

Query: 375 LSLSIMIALFMNRLNAKIA 393
           L+++++++L +  L  K++
Sbjct: 247 LTMTLVLSLLLQWLQRKMS 265



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 9/126 (7%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                IL G   T  +     I A I+G ++G GR+S N ++  +   Y+E  R +P LV
Sbjct: 50  RIFETILTGLGTTLMVTGISFICALILGLVLGLGRVSRNLILRNLSIGYIEFIRGVPILV 109

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +IF +  +++           L   + +N + L+         A + +++  +  +    
Sbjct: 110 LIFTISFAIV---------PALSDWITINGQKLTVSLTARAIIALVLIYAAYIAEIFRAG 160

Query: 204 ATRLSR 209
              +SR
Sbjct: 161 IESISR 166


>gi|29833750|ref|NP_828384.1| ABC transporter permease protein [Streptomyces avermitilis MA-4680]
 gi|29610874|dbj|BAC74919.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 318

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/274 (21%), Positives = 114/274 (41%), Gaps = 14/274 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +P      ++  +++ VL       ++    +  +R   +       +  +       
Sbjct: 20  RVLPLRRPGRWILTAIVLVLVAQIGHGLVTNPFYQWDRFAYWFLRPTILDGLLITLEVAA 79

Query: 197 ----GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LH 245
                 +L      L+R       +A+  +Y+  +L+  +P +V++   Y        L 
Sbjct: 80  YSAVLGLLGGILLALARLSRSPVLRAVSWVYV--WLLRSVPLIVVLIFLYNFSALYKTLS 137

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P    F     S ++ +     + LS   AA+ AE+VR G+++V +GQ EAA ALGL
Sbjct: 138 LGVPFGPAFLTFDESRLATDMAVAVVGLSLNEAAYAAEVVRGGILSVDQGQHEAAAALGL 197

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAI 364
                   ++ PQA+RSI P   +Q + L+K +SL   V   DL     T+ +   G  +
Sbjct: 198 PKSYQFTKIVFPQALRSITPNYVNQLIGLIKGTSLVFYVSLLDLFGSAQTMGSTYPGDIV 257

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++L+    YL L+ ++++    +    A    +
Sbjct: 258 PLLLVVTVWYLILTSIVSVVQFYVERHYARGATR 291



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 7/171 (4%)

Query: 71  EIDQGIV--PYTSDSSYATAIL-----VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           +I  G+V  P+     +A   L      G + T  +A    +   + G L+   RLS + 
Sbjct: 42  QIGHGLVTNPFYQWDRFAYWFLRPTILDGLLITLEVAAYSAVLGLLGGILLALARLSRSP 101

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           ++  +  VYV + R++P +VV+ FLY        +       P  +  +   L+      
Sbjct: 102 VLRAVSWVYVWLLRSVPLIVVLIFLYNFSALYKTLSLGVPFGPAFLTFDESRLATDMAVA 161

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                +   ++   +V     +             LP  Y  T ++F    
Sbjct: 162 VVGLSLNEAAYAAEVVRGGILSVDQGQHEAAAALGLPKSYQFTKIVFPQAL 212


>gi|308062254|gb|ADO04142.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           Cuz20]
 gi|317177726|dbj|BAJ55515.1| amino acid ABC transporter permease [Helicobacter pylori F16]
          Length = 240

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 44  PLAIISFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|289650400|ref|ZP_06481743.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
          Length = 229

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRGIAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRGIAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|269968793|ref|ZP_06182782.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269826605|gb|EEZ80950.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 365

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 118/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     ++        +T+       V S  +G+
Sbjct: 118 TPKRMWIWLFFVNIYPFIIAGLLYGGVFGLEVVDTHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 VLAL-----GRRSEMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFMS 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  + +A++AE+VR GL A+P+GQ EAA ALGL++ K T L++LPQ
Sbjct: 223 EGSETDKLIRALIGVVMFASAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 37/74 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG ++  GR S   ++  IC VY+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVVLALGRRSEMPIIRSICTVYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSVLPIPDHSIVL 165
           +   +     +  L
Sbjct: 217 LPLFMSEGSETDKL 230


>gi|168492769|ref|ZP_02716912.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|183577030|gb|EDT97558.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
          Length = 225

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL+ LPQA   I+PPLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISAMRLITLPQAFCIILPPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPAFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|89073070|ref|ZP_01159617.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89051288|gb|EAR56744.1| putative ABC-type amino acid transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 365

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 121/266 (45%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  L      Y+  + +  +  +  +  F ++    GL      +     I +   ++GI
Sbjct: 110 IGLLAYEKTPYRGWIWLFFVNIYPFLAGFLLYGGVFGLPIVETHLWGGLLITLVIAIVGI 169

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V+SL       L R       +++  +YI  +    L T++ +A           +    
Sbjct: 170 VVSLPIGVVLALGRRSEMPIIRSICTVYIELWRGVPLITVLFMA----------SVMLPL 219

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+     + + +   I +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 220 FLSAEMETNKLIRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIV 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G    +     G A E  +    
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAATSDPEWLGFATESYVFVAL 339

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  K+    K+
Sbjct: 340 VFWIFCFGMSRYSIYLENKLHTGHKR 365


>gi|242239704|ref|YP_002987885.1| arginine transporter permease subunit ArtQ [Dickeya dadantii
           Ech703]
 gi|242131761|gb|ACS86063.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 238

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 216 GKALPLLYISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
            + LP + +  F+ FG   L+L +A  + L+           I    VSP F+   IAL+
Sbjct: 54  LRGLPEILVVLFIYFGSSQLLLTLADGFTLNLGVVQFPVKLNIENFEVSP-FLCGVIALA 112

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ ++ +R  L AVPRGQ E+  ALG++     R +++PQ  R  +P L +Q+L L
Sbjct: 113 LLYAAYASQTLRGALKAVPRGQWESGQALGMSKSVIFRRLIMPQMWRHALPGLGNQWLVL 172

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK+++L   +   DL+    +I  +T +     +I   IYL+++++    + R+  +   
Sbjct: 173 LKDTALVSLISVNDLMLQTKSIATRTQEPFTWYMIAAAIYLAITLLSQAILQRIETRATR 232

Query: 395 KEKK 398
            E++
Sbjct: 233 FERR 236


>gi|152985671|ref|YP_001349968.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PA7]
 gi|150960829|gb|ABR82854.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PA7]
          Length = 232

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 102/231 (44%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L      +    ++   S ++G++L++    L R   +        LY 
Sbjct: 1   MIFDFSVIWDSLPLYFDGLLVTLRLLSISLLVGLLLAVPL-ALMRVSRQPLVNFPAWLY- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAF 280
            T++I G P LV + L Y        L QF+ +  S + P          +A +  T+A+
Sbjct: 59  -TYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTSAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI+   L A P G++EAA A+G++  +  R +LLP A+R  +P  +++ + +L+ +SL
Sbjct: 112 TAEILAGSLKATPHGEIEAAKAMGMSRLQMYRRILLPSALRRALPQYSNEVIMMLQTTSL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A  V   D+      + +Q     E  +     YL L+ ++         +
Sbjct: 172 ASIVTLVDITGAARNVYSQYYLPFEAFITAGLFYLCLTFILVRLFKLAERR 222



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  ++           G + T  L    ++   ++   +   R+S   LV +   +Y  V
Sbjct: 2   IFDFSVIWDSLPLYFDGLLVTLRLLSISLLVGLLLAVPLALMRVSRQPLVNFPAWLYTYV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            R  P LV +F +Y  +     + + ++            L+F   T    A+I   S 
Sbjct: 62  IRGTPMLVQLFLIYYGLAQFDAVRESALWPWLSNASFCACLAFAINTSAYTAEILAGSL 120


>gi|71734056|ref|YP_274851.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554609|gb|AAZ33820.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 220

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +     + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLAPFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|28896781|ref|NP_796386.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260362451|ref|ZP_05775393.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
 gi|260876541|ref|ZP_05888896.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260897402|ref|ZP_05905898.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|28804989|dbj|BAC58270.1| amino acid ABC transproter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308087935|gb|EFO37630.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308090363|gb|EFO40058.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308111819|gb|EFO49359.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus K5030]
          Length = 223

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMATWGLVFSLILAVILANI-----RVFKLPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    PV+   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQIFPVMVGID---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRNQMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 35/71 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLVFSLILAVILANIRVFKLPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  + P+ 
Sbjct: 75  YYGLPQIFPVM 85


>gi|322507367|gb|ADX02821.1| ABC-type arginine transport system, permease component
           [Acinetobacter baumannii 1656-2]
          Length = 214

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 4/201 (1%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFI 257
           V+       S+  + K  + +   Y  T LI  +P LV++ L +  L      + +   +
Sbjct: 14  VIIGLIGASSKLSNIKALRYIATAY--TTLIRSVPDLVIMLLLFYSLQLGLNQITEALQM 71

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
               ++P F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL P
Sbjct: 72  DQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFP 130

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q MR  +P + + +  L+K ++L   +G  D+V +       T Q     ++   IYL++
Sbjct: 131 QMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQDAGRSTMQLFFFSIVAAAIYLAI 190

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           + +  L +  L    +   +K
Sbjct: 191 TTVSNLILIWLERHYSAGVRK 211


>gi|311277768|ref|YP_003939999.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308746963|gb|ADO46715.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 367

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 132/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+++G +          I    +  L   GR  
Sbjct: 77  WVFIRERFG-QFMYGLYPHDQRWRIHLALVIGVLT---------IIPMFLKRLPQRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  + PL+V + LY     +  +                     T
Sbjct: 125 -----------YIACWAVLYPLIVWWLLYGGFFGLDRVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSTMPVVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMSEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 361 ---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 VWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|308188313|ref|YP_003932444.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Pantoea vagans C9-1]
 gi|308058823|gb|ADO10995.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Pantoea vagans C9-1]
          Length = 366

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 79/409 (19%), Positives = 148/409 (36%), Gaps = 66/409 (16%)

Query: 3   KNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG-- 60
                  T   SR        + +     +L L    +    +    N +      +G  
Sbjct: 6   HETPPVPTTPVSRAWLWARKNLFSSWFNTLLTLFCIWVIWHVIPPALNWLVFQANWIGTT 65

Query: 61  ----------IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110
                       F+  R G +   G+ P+        A+++G ++         I    +
Sbjct: 66  RADCTKEGACWVFIHARFG-QFMYGLYPHELRWRINLALVIGLLS---------IVPMFL 115

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            +L   GR             Y+  +  I P++V F LY   L +  +            
Sbjct: 116 KSLPYRGR-------------YIAAWAVIYPVIVWFLLYGGYLGLERVETRQ-------- 154

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                    TLT+   +     +  LGI+L+L      R       + L +++I  +   
Sbjct: 155 -----WGGLTLTLIIASVGIAGALPLGILLAL-----GRRSRMPVVRTLSIIFIEFWRGV 204

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L T++ ++           +    F+   T   + +   + +  + +A++AE+VR GL 
Sbjct: 205 PLITVLFMS----------SVMLPLFMSEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQ 254

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EAA +L L + K   LV+LPQA++  IP L +  + L K++SL + +G  DL 
Sbjct: 255 ALPKGQYEAAESLALGYWKTQMLVILPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLF 314

Query: 351 SVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           S            G + E  +    +Y      ++ +   L  +     
Sbjct: 315 SSVQQATVDPTWLGMSTEGYVFAALVYWIFCFSMSRYSQYLEKRFHTGR 363


>gi|238026230|ref|YP_002910461.1| glutamate/aspartate transport system permease [Burkholderia glumae
           BGR1]
 gi|237875424|gb|ACR27757.1| Glutamate/aspartate transport system permease protein [Burkholderia
           glumae BGR1]
          Length = 225

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 6/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           +I   + V+GIV       L R       +    LY++ F       L
Sbjct: 13  LPALWTGAIVTLEITALAIVVGIVWGTLL-ALMRLSGVAALQWFARLYVTVFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P L Q       T+     S  IA S + AA+ +EI+R+G+ AVPRG
Sbjct: 69  VMVLLWFFL--IVPQLLQGVLGLSPTIDIRLASAMIAFSLFEAAYYSEIIRAGIQAVPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNAAFALGMGYGQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G ++E+IL     Y  + ++ +  +  L  K+  
Sbjct: 187 IGDRDGTSVEMILFAGACYFVVCVLASALVKGLQKKVTR 225



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G + T  +    ++   + GTL+   RLS    + W  R+YV VFR+IP ++V+ +
Sbjct: 15  ALWTGAIVTLEITALAIVVGIVWGTLLALMRLSGVAALQWFARLYVTVFRSIPLVMVLLW 74

Query: 148 LYKSVLSV 155
            +  V  +
Sbjct: 75  FFLIVPQL 82


>gi|210629972|ref|ZP_03296195.1| hypothetical protein COLSTE_00079 [Collinsella stercoris DSM 13279]
 gi|210160723|gb|EEA91694.1| hypothetical protein COLSTE_00079 [Collinsella stercoris DSM 13279]
          Length = 252

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 5/186 (2%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             +  + +  +Y+  +    LP  V +   Y        L              F    +
Sbjct: 53  RSRVLRGISRVYVEFYQNTPLP--VQVLFMYMA--GPQFLQAVTGAAQPVRIAPFALGAL 108

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y AA++AE++R+G+ AVPRGQMEAA + G +  +    ++LPQ  + I+PPL +Q 
Sbjct: 109 GVGLYHAAYVAEVIRTGIEAVPRGQMEAAQSQGFSRLQTYAYIVLPQTFKIILPPLCNQA 168

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL+KN+S+   V   DL+      ++  G  ++  +I  F+Y  +   +A+    L  +
Sbjct: 169 LNLVKNTSVLALVAGGDLMYRSDNFVSLYG-YLQGYIICCFMYFLICFPLAMLGQWLERR 227

Query: 392 IALKEK 397
              + +
Sbjct: 228 SKERPR 233


>gi|148974815|ref|ZP_01811795.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145965324|gb|EDK30573.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 292

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 110/262 (41%), Gaps = 16/262 (6%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
             +   +V                +  +   + +    +    ++ ++S VL +      
Sbjct: 25  WLYYRSAVGINYQWRWEDAFTLIFIPPSQGSIPYFFQGLVATLRLSLWSMVLALSFGTLL 84

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG------------ 252
             ++RH      K   LL+I           V I   +  +   P+LG            
Sbjct: 85  G-VARHSKIALFKTPALLFIQLVRNIPPLVFVFIFYFFVSNQLIPLLGLETLLREHNGDI 143

Query: 253 ---QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q    G + +     S  I +   ++A+IAE++R+GL ++P+GQ EAA +LGL+   
Sbjct: 144 NQLQAFLFGPANLWENLASGVICIGLLSSAYIAEVIRAGLESIPKGQWEAADSLGLSVFS 203

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQ + +I PPL  Q ++L+K++S+   +   ++  VG  + N +G   EI LI
Sbjct: 204 KYRYVVGPQVLTAITPPLAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLI 263

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
              +Y +L   ++    ++  +
Sbjct: 264 VGAVYFALCFTLSRIFRKIEQR 285



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 12/111 (10%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           +L  ++     W          +S + +   +  E A       ++              
Sbjct: 14  VLFAIICAFAGWLYY-------RSAVGINYQWRWEDA-----FTLIFIPPSQGSIPYFFQ 61

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           G V T  L+   M+ A   GTL+G  R S   L      +++++ RNIPPL
Sbjct: 62  GLVATLRLSLWSMVLALSFGTLLGVARHSKIALFKTPALLFIQLVRNIPPL 112


>gi|15601789|ref|NP_233420.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|227812602|ref|YP_002812612.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505829|ref|ZP_04395338.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229510316|ref|ZP_04399796.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229517552|ref|ZP_04406997.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229605362|ref|YP_002876066.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|298499805|ref|ZP_07009611.1| amino acid ABC transporter, permease [Vibrio cholerae MAK 757]
 gi|9658481|gb|AAF96932.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|227011744|gb|ACP07955.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227015682|gb|ACP11891.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229345588|gb|EEO10561.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229352761|gb|EEO17701.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229356180|gb|EEO21098.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229371848|gb|ACQ62270.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|297541786|gb|EFH77837.1| amino acid ABC transporter, permease [Vibrio cholerae MAK 757]
          Length = 266

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYTWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFAALQMMLVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGE 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|110636301|ref|YP_676509.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110287285|gb|ABG65344.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chelativorans sp. BNC1]
          Length = 213

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 14/223 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   + F          + + S VLG V+ +    L R  + K   A+    +   +  
Sbjct: 4   FSYNDIYFLLDATQYTVWLSLASLVLGSVVGIGICLL-RLSNSKLIGAIAATIV--AIGQ 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L Y           F       V   FM+  IALS + A ++ EI RS + 
Sbjct: 61  GVPPLVLLFLAY-----------FGLAFAGIVVSPFMASCIALSFFAAVYLGEIWRSAIQ 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P  Q EA+ +L L+  +    V++PQA+R   P      + L+KN+SLA  VG  +L 
Sbjct: 110 SIPIAQWEASESLSLSWAQQMIYVIVPQAIRLATPSSVGFIVQLVKNTSLASIVGLVELT 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  + N T QA ++ L    IY  +   I+L    L  K A
Sbjct: 170 RAGQLVNNATFQAFQVFLTVAIIYFCICYPISLISRFLEKKTA 212


>gi|320159033|ref|YP_004191411.1| arginine ABC transporterpermease ArtQ [Vibrio vulnificus MO6-24/O]
 gi|319934345|gb|ADV89208.1| arginine ABC transporter, permease protein ArtQ [Vibrio vulnificus
           MO6-24/O]
          Length = 229

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATR--LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
               ++ + S  +G+VL++      ++RH   K     P   + T L      LV++ + 
Sbjct: 15  WMTIQLALVSLAVGLVLAVVFAGGEMTRHRLVKW----PTTALVTVLRGLPELLVVLFIY 70

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +           F   G       F+S  IALS   A++ ++ +R  L AV +GQ EAA 
Sbjct: 71  FG-----STQVLFLLTGDFIEVSPFLSGVIALSLIFASYASQTIRGALKAVNKGQREAAS 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALG++  +    ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T 
Sbjct: 126 ALGMSKSRTFFRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATH 185

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +A         IYL ++++    +  ++AK +
Sbjct: 186 EAFTWYATAAAIYLVITLVTQRAVKIIDAKFS 217


>gi|302338915|ref|YP_003804121.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636100|gb|ADK81527.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 298

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 10/265 (3%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L V  FL++S   +    +   V+          L     T+  +    + +F +G V+
Sbjct: 31  LLFVALFLFRSSQVMHYRWNWKPVVASFFNPRGILLKGFLTTIRLSIWSSIIAFFIGTVV 90

Query: 201 SLFATRLSRHFHEKTGKAL-------PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            +     +R F   +G  +       PL+ +  F  F    L+      Q   +   L Q
Sbjct: 91  GVGRLVRNRFFRLLSGLYVSLIRNLPPLVLVFIFYFFFSSQLLDPLGIDQAARNAAPLVQ 150

Query: 254 ---FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+   +    F+S  + L  Y  ++IAEI++SG+ +V RGQ EA+ +LGL+    
Sbjct: 151 RLLSIFLSQPSRLTAFLSAVVTLGIYEGSYIAEIIQSGIRSVDRGQWEASYSLGLSSFDR 210

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
           TRL++LPQA R+ +P LT Q+++ +K+SS+   +  A+L   G  +   T + +EI    
Sbjct: 211 TRLIILPQAARNALPALTGQFISTMKDSSIVSVISIAELTFQGMELTASTYRTLEIWSAV 270

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
             +Y  L+   ++  +R+ + +  +
Sbjct: 271 TLLYFLLTFTASILSSRIESGLRKR 295



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 49/107 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF+ T  L+    I A  IGT+VG GRL  N+    +  +YV + RN+PPLV++F  
Sbjct: 65  LLKGFLTTIRLSIWSSIIAFFIGTVVGVGRLVRNRFFRLLSGLYVSLIRNLPPLVLVFIF 124

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           Y    S L  P              + L    L+  +    F+ + V
Sbjct: 125 YFFFSSQLLDPLGIDQAARNAAPLVQRLLSIFLSQPSRLTAFLSAVV 171


>gi|254507308|ref|ZP_05119444.1| amino acid ABC transproter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219549768|gb|EED26757.1| amino acid ABC transproter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 223

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      +FS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLELMPILLKYLGTTMEMAVWGLIFSLILSVILANI-----RVFKVPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS F   G P LV + L   L++  P +  +           F +  I L+ + AA++A
Sbjct: 58  YISFF--RGTPLLVQLFL---LYYGLPQIFPW-----MVGLDAFSAAVIGLTLHFAAYMA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA 
Sbjct: 108 ESIRAAIIGIDRSQMEASLSVGMTTTQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 168 TLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 34/71 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G+I + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMAVWGLIFSLILSVILANIRVFKVPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  + P  
Sbjct: 75  YYGLPQIFPWM 85


>gi|309389820|gb|ADO77700.1| amino acid ABC transporter membrane protein, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 212

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 19/231 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + ++   L    +T        +FS +LGI  +L           K      +L  
Sbjct: 1   MDYIINVSGYILEGSLITFQLYLITALFSVILGIAGALGKLS-------KIPFLESVLSF 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T++  G P L+ +   Y   +  PVL       G T+ P F +  +       A+  EI
Sbjct: 54  YTWVFRGTPLLLQLFFAY---YGLPVL-------GITLDP-FPAAALTFIFNYGAYFTEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++ +GQ EAA  LG+ +R+    +++PQ ++ ++P  +++ +NL+K+S+L   +
Sbjct: 103 FRGGIESIGQGQYEAAKVLGMNYRQTMSRIIIPQTIKRVLPATSNEAINLVKDSALVAVI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  DL+      + +    I   +I    YL +S +I     +L AK ++ 
Sbjct: 163 GLGDLLRAAKVSVTRDFSIIP-FIIAAVFYLLISSVIVTVFRKLEAKYSVY 212



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 33/95 (34%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + TF L     + + I+G     G+LS    +  +   Y  VFR  P L+ +FF
Sbjct: 10  YILEGSLITFQLYLITALFSVILGIAGALGKLSKIPFLESVLSFYTWVFRGTPLLLQLFF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            Y  +  +    D           N          
Sbjct: 70  AYYGLPVLGITLDPFPAAALTFIFNYGAYFTEIFR 104


>gi|298486962|ref|ZP_07005015.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298158524|gb|EFH99591.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 246

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVMERRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|317053832|ref|YP_004117857.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951827|gb|ADU71301.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 214

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 18/207 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +      S +LG++ ++      R       + + +LY   F   G P L+ +   Y  
Sbjct: 22  LSVAAIAGSTLLGLLAAVL-----RTSRLPVARQIAVLYTELF--RGTPVLITLMFIY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F +  + LS Y  A+IAE+ R+G+ AVP+GQ E +  LG
Sbjct: 73  ---------FGVAYFGYEINLFAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILG 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+ R+    V+LPQ    ++PPL  QYL+L+K++S+   +G ++L+  G  I+++ GQ +
Sbjct: 124 LSKRQTFLSVILPQTRGIVLPPLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPV 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
            I  +   +Y  +   ++ ++     +
Sbjct: 184 VIYGLVAVLYFVVCFPLSRWVQHHQTR 210



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 3/110 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+ + +  +T++G L    R S   +   I  +Y E+FR  P L+ + F+Y  
Sbjct: 15  GLGITLLLSVAAIAGSTLLGLLAAVLRTSRLPVARQIAVLYTELFRGTPVLITLMFIYFG 74

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGI 198
           V       +       G+ +               A     +  S++LG+
Sbjct: 75  VAYFGYEINLFAAGILGLSIYQGAYIAEVFRAGIEAVPKGQWEVSWILGL 124


>gi|242240516|ref|YP_002988697.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132573|gb|ACS86875.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 214

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 18/207 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +    V S +LG++ ++      R      G+ L LLY   F   G P L+ +   Y  
Sbjct: 22  LSVAAMVGSTLLGLLAAVL-----RTSRLPFGRQLALLYTELF--RGTPVLITLMFIY-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F +  + LS Y  A+I+E+ R+G+ AVP+GQ E +  LG
Sbjct: 73  ---------FGVAYFGYEINLFAAGILGLSIYQGAYISEVFRAGIDAVPKGQWEVSWILG 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +    V+LPQ    ++PPL  QYL+L+K++S+   +G ++L+  G  I+++ GQ  
Sbjct: 124 LSKWQTFMHVVLPQTRGIVLPPLVGQYLSLIKDTSIVSMIGMSELMHQGQAIVDRIGQPA 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
            I  +   +Y  +   ++ ++    A+
Sbjct: 184 VIYSLVSLLYFVVCFPLSRWVQHHQAR 210



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 3/113 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+ + M+ +T++G L    R S       +  +Y E+FR  P L+ + F+
Sbjct: 12  LLRGLGITLLLSVAAMVGSTLLGLLAAVLRTSRLPFGRQLALLYTELFRGTPVLITLMFI 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGI 198
           Y  V       +       G+ +              +A     +  S++LG+
Sbjct: 72  YFGVAYFGYEINLFAAGILGLSIYQGAYISEVFRAGIDAVPKGQWEVSWILGL 124


>gi|56962546|ref|YP_174272.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908784|dbj|BAD63311.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 211

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 23/225 (10%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +   +  LS    T+  +    V SFV+G ++++      R    +    L   Y+  F 
Sbjct: 6   IDYWDAFLSGFLQTLKASTYALVGSFVVGTLIAVM-----RISTIRVLNWLGTAYVEFFR 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
                 L+L    + L F                   F +  + L  YT+AFIAE +R+G
Sbjct: 61  NIP---LLLTVFIFWLGFRL---------------GGFEAGTLGLLIYTSAFIAEAIRAG 102

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P GQMEAA + GLT+ +A R V+LPQA++++IPPL +Q LNL+KNSS+   VG AD
Sbjct: 103 IQAIPTGQMEAARSSGLTYTQALRFVILPQAIKTVIPPLGNQTLNLVKNSSILAVVGGAD 162

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+  G  I + T     +  I    YL L+I ++  +     ++A
Sbjct: 163 LMYQGDIINSMTFSPYAVYGIVALFYLLLTIPLSWGIGYYEKRLA 207



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A L GF+ T   +   ++ + ++GTL+   R+S  +++ W+   YVE FRNIP L+ 
Sbjct: 8   YWDAFLSGFLQTLKASTYALVGSFVVGTLIAVMRISTIRVLNWLGTAYVEFFRNIPLLLT 67

Query: 145 IFFLYKSV 152
           +F  +   
Sbjct: 68  VFIFWLGF 75


>gi|291618873|ref|YP_003521615.1| YecS [Pantoea ananatis LMG 20103]
 gi|291153903|gb|ADD78487.1| YecS [Pantoea ananatis LMG 20103]
          Length = 308

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 1/263 (0%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  +V +F L   V SV   P     +    F +   L     T+       VFS + 
Sbjct: 17  RTLGAVVALFILAGVVQSVAFNPRWEWGVFARWFFDPVILHGLGQTLLLTLLGTVFSLLF 76

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FN 255
           G V++L     S          + L      ++  +       L   L    P     + 
Sbjct: 77  GGVMALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSLGVPFTSLSWG 136

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 V  +F +  I L+   AA+ AEI+R G + V  GQ+EAA ALGL+  + T  ++
Sbjct: 137 HFQTINVLGQFPAAVIGLTLVQAAYSAEIIRGGFLGVDHGQVEAASALGLSASRRTFRII 196

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R+IIP   ++ ++L K +++   +   +L      I N+  + I ++++    YL
Sbjct: 197 LPQALRAIIPTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYL 256

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++++  + +   +A    +
Sbjct: 257 IITTVLSVIQHSVERWLARSVSR 279


>gi|307727081|ref|YP_003910294.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Burkholderia
           sp. CCGE1003]
 gi|307587606|gb|ADN61003.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. CCGE1003]
          Length = 219

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 12/209 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I  F+ VL IV++  AT  ++       + L   Y+  F   G   LV +   + +
Sbjct: 14  VTVEIAAFATVLAIVMAFVATA-AKLAPWAPLRWLGNAYVEIF--RGTSLLVQLFWFFFV 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P                F    + L  +  A+ +EI+R  L +VP GQ EAA+AL 
Sbjct: 71  LPLPPF---------RIEMTPFTVAIVGLGLHYGAYGSEILRGALRSVPGGQFEAALALN 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R ++LPQAM + +PP T+  + LLK +SL   +  +DL      +   T +  
Sbjct: 122 MSPLTRMRRIVLPQAMINALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDEATFKTA 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           EI ++ + IY  L+ ++   M     +++
Sbjct: 182 EIFMLTLVIYFVLAQILVALMRHFERRVS 210



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A    + A ++  +  A +L+    + W+   YVE+FR    LV +F+ 
Sbjct: 8   LLQGTLVTVEIAAFATVLAIVMAFVATAAKLAPWAPLRWLGNAYVEIFRGTSLLVQLFWF 67

Query: 149 YKSVLSVLPIPDHSI 163
           +  +       + + 
Sbjct: 68  FFVLPLPPFRIEMTP 82


>gi|169795313|ref|YP_001713106.1| histidine transport system permease ABC transporter membrane
           protein [Acinetobacter baumannii AYE]
 gi|213158700|ref|YP_002319998.1| histidine transport system permease protein HisQ [Acinetobacter
           baumannii AB0057]
 gi|215482846|ref|YP_002325049.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB307-0294]
 gi|294838851|ref|ZP_06783534.1| Histidine transport system permease protein hisQ [Acinetobacter sp.
           6013113]
 gi|294858197|ref|ZP_06795966.1| Histidine transport system permease protein hisQ [Acinetobacter sp.
           6013150]
 gi|301347433|ref|ZP_07228174.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB056]
 gi|301512551|ref|ZP_07237788.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB058]
 gi|169148240|emb|CAM86103.1| Histidine transport system permease protein (ABC superfamily,
           membrane) [Acinetobacter baumannii AYE]
 gi|213057860|gb|ACJ42762.1| histidine transport system permease protein HisQ [Acinetobacter
           baumannii AB0057]
 gi|213986170|gb|ACJ56469.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB307-0294]
          Length = 229

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 9/224 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S ++G++ +      S+  + K  + +   Y  T LI  +P L
Sbjct: 11  LSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSNIKALRYVATAY--TTLIRSVPDL 63

Query: 236 VLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V++ L +  L      + +   +    ++P F++  I L+    A+  E  R    +VPR
Sbjct: 64  VIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA+A G+T  +    VL PQ MR  +P + + +  L+K ++L   +G  D+V +  
Sbjct: 123 GQIEAAMAYGMTPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQ 182

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                T Q     ++   IYL+++ +  L +  L    +   +K
Sbjct: 183 DAGRSTMQLFFFSIVAAAIYLAITTVSNLILIWLERHYSAGVRK 226


>gi|153010818|ref|YP_001372032.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562706|gb|ABS16203.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 215

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 10/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N   +          A + V    L I++ L    L+     K  +  PL +I T  + 
Sbjct: 1   MNFSLMVEVFPYFLEAALVTVEISALAILIGLSVGALATS--AKLSRFWPLRFIGTAYVS 58

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                  +   + L+F  P +       G  + P F +  I L     A+ AE +R  ++
Sbjct: 59  VFRGTPCLLQLFVLYFGGPQI-------GINLEP-FAAGAIGLGLNIGAYYAEAMRGAIL 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V  GQ EAA ++G ++ ++ R V+LPQA R +I  L    + L+K S+L  A+   +L 
Sbjct: 111 TVDTGQNEAARSIGFSNGQSMRFVVLPQAARLMIRSLGVNTVMLIKGSALVSAISVVELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 I  T +  EI  I   IY+ L  ++A F++ L A+ ALK
Sbjct: 171 YTAQRFIGSTYRPFEIFGIAAAIYMVLIYIVARFVDFLEARYALK 215



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L   + T  ++   ++    +G L  + +LS    + +I   YV VFR  P L+ +F 
Sbjct: 12  YFLEAALVTVEISALAILIGLSVGALATSAKLSRFWPLRFIGTAYVSVFRGTPCLLQLFV 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           LY     +    +       G+ LN        + 
Sbjct: 72  LYFGGPQIGINLEPFAAGAIGLGLNIGAYYAEAMR 106


>gi|86358033|ref|YP_469925.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282135|gb|ABC91198.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 276

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 7/216 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +   S V G +LSL    ++R    +        YI  F   G P L  + L Y 
Sbjct: 67  WVTLSLVAISVVCGAILSLPL-AMARLSKNRALNWFAYGYIYFF--RGTPLLAQLFLVYY 123

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L   +P L              +    +A++  TAA+ AEI+R  + +VP GQ EAA A
Sbjct: 124 GLGVFRPQLEAVGIWW--FFREAWYCGLLAMTINTAAYQAEILRGAIESVPHGQREAAAA 181

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+    A R ++LPQA    + P  ++ + L+K S++   +   DL+       ++T  
Sbjct: 182 LGIHRIIAFRKIILPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFD 241

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  L     YL++   +      +  ++    K+
Sbjct: 242 Y-QTYLWAAIFYLTIVEALRHLWAWIERRLTRHLKR 276



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 61/203 (30%), Gaps = 15/203 (7%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L    ++   I+   +   RLS N+ + W    Y+  FR  P L 
Sbjct: 57  RYGPRYLHGLWVTLSLVAISVVCGAILSLPLAMARLSKNRALNWFAYGYIYFFRGTPLLA 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI----- 198
            +F +Y  +    P  +   +  F       GL   T+         +   +  +     
Sbjct: 117 QLFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLLAMTINTAAYQAEILRGAIESVPHGQR 176

Query: 199 --VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI----ALKYQLHFDKPVLG 252
               +L   R+           LP  +I     +G   ++LI     +      D     
Sbjct: 177 EAAAALGIHRIIAFRKI----ILPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGET 232

Query: 253 QFNFIGGSTVSPEFMSLYIALSC 275
           ++ F           +    L+ 
Sbjct: 233 RYAFSRTFDYQTYLWAAIFYLTI 255


>gi|86146433|ref|ZP_01064756.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218709051|ref|YP_002416672.1| histidine transport system permease HisM [Vibrio splendidus LGP32]
 gi|85835696|gb|EAQ53831.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218322070|emb|CAV18142.1| Histidine transport system permease protein hisM [Vibrio splendidus
           LGP32]
          Length = 225

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T A +   + ++G+ +++    ++R+       A    +I  F   G P L
Sbjct: 10  LPIYLGGLWTTAWMVCVALIVGLFVAIPL-AIARNSPNMMINAPAWSFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++  K  R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSTPKTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ +I         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFIIIAIFKFAEKRF 217



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 35/102 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T W+    +I    +   +   R S N ++      ++  FR  P LV ++ +
Sbjct: 13  YLGGLWTTAWMVCVALIVGLFVAIPLAIARNSPNMMINAPAWSFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|93005159|ref|YP_579596.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92392837|gb|ABE74112.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 244

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S ++G+VL L     ++  +    + +  +Y +T        LVL  + Y  
Sbjct: 17  VTIQLAMTSLIIGMVLGLLG-ATAKLSNIWLLRKIATVYTATMRGIPELLLVL-FIYYGG 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 + +            F    +ALS    A+  EI R  +  +P GQ EAA A+G
Sbjct: 75  SILLMSILKKFGYNDYVEISAFWGGVMALSIAFGAYATEIFRMSIQEIPIGQREAAQAIG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +    + LPQ  +  +P L + +L LLK+++L   VG  D++         T Q  
Sbjct: 135 MRPFQTFYRITLPQVWQIALPGLGNLFLVLLKDTALVSVVGLKDIMYQSSRAAQSTQQPF 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    IYL L+++I  FM  L  +
Sbjct: 195 TFYMAAAIIYLGLTMLITGFMMWLEWR 221



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA + +I   ++G L    +LS   L+  I  VY    R IP L++
Sbjct: 7   FGALLLSGATVTIQLAMTSLIIGMVLGLLGATAKLSNIWLLRKIATVYTATMRGIPELLL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           + F+Y     +L            + ++   
Sbjct: 67  VLFIYYGGSILLMSILKKFGYNDYVEISAFW 97


>gi|94309345|ref|YP_582555.1| amino acid ABC transporter permease [Cupriavidus metallidurans
           CH34]
 gi|93353197|gb|ABF07286.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Cupriavidus metallidurans CH34]
          Length = 242

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 4/236 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             H  V       N   L +    +     + + S+++ + +      L R    K    
Sbjct: 4   AFHWGVFLEQAAANETYLDWMISGLKVTIALGLSSWIIALAIGSVLGVL-RTVPNKWLSG 62

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +   Y+  F    +P LV + + Y +  +  + G       +  + +F++  + L  +TA
Sbjct: 63  IAATYVEIF--RNIPLLVQLFIWYFVGPEL-LPGGEAIKQMNPFTQQFLAAMLCLGTFTA 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E VRSG+ ++PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS
Sbjct: 120 ARVCEQVRSGINSLPRGQKNAGLAMGFTLPQTYRYVLLPMAFRVIVPPLTSEFLNIFKNS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++A  +G  +L + G  +++ T +  E  +    +Y  ++  + L M  +  +  +
Sbjct: 180 AVASTIGLLELAAQGRQLVDYTARPYESFIAVTVLYALINFTVMLIMRWVERRTRV 235



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 43/86 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++ +Y   ++ G   T  L  S  I A  IG+++G  R   NK ++ I   YVE+FRNIP
Sbjct: 16  ANETYLDWMISGLKVTIALGLSSWIIALAIGSVLGVLRTVPNKWLSGIAATYVEIFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            LV +F  Y     +LP  +    + 
Sbjct: 76  LLVQLFIWYFVGPELLPGGEAIKQMN 101


>gi|330808726|ref|YP_004353188.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376834|gb|AEA68184.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 220

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +     + + S  +G V+ L A   +     +  + L  +Y++  +I   
Sbjct: 11  WRDFDTLLAGLGLGLSLALVSIAIGCVIGL-AMAFALLSKHRILRVLASVYVT--VIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y           F          +  S  I LS Y  A++ E+ R GL+++
Sbjct: 68  PILVLILLIY-----------FALPSLGIRLDKLPSFVITLSLYAGAYLTEVFRGGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA +A+GL   +    + +P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 HKGQREAGLAIGLGEWQVKAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y++   +IA+ +     ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVAACYLIAMVLRYFEQRLAIRR 220



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
             +    +IG  +    LS ++++  +  VYV V RN P LV+I  +Y ++ S+    D 
Sbjct: 30  VSIAIGCVIGLAMAFALLSKHRILRVLASVYVTVIRNTPILVLILLIYFALPSLGIRLDK 89

Query: 162 SIVL 165
               
Sbjct: 90  LPSF 93


>gi|302024083|ref|ZP_07249294.1| amino acid ABC transporter, permease protein [Streptococcus suis
           05HAS68]
          Length = 232

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 11/229 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                      +              I V +F++ + L +    LS     K  K +  +
Sbjct: 8   PYAWENWVSYFKDFPTFFQGFLFTLAISVGAFIMAMFLGIVFGSLS-SSINKVLKIIARV 66

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+        P LV   + Y   +  P++  +  +        + +  I +  Y  A+IA
Sbjct: 67  YVE--YYQNTPLLVQFMIVY---YGLPLISNYVLMPSI-----YWTAVICVGLYHGAYIA 116

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++R+G+ AVP GQ EAA++ G T  +  R+++LPQA+ +I+PPLT+Q +NL+KN++   
Sbjct: 117 EVIRAGIEAVPTGQTEAALSQGFTQSETMRIIILPQAIPTILPPLTNQVVNLIKNTATVA 176

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +  AD++ +  +        I       F+Y  +   +A +  R+  K
Sbjct: 177 IISGADIMFMTKSWSAMNANYIPAFAGAAFLYFIMCFPVASWGRRIEEK 225



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 35/78 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++    I A  +G + G+   S NK++  I RVYVE ++N P LV    +
Sbjct: 24  FFQGFLFTLAISVGAFIMAMFLGIVFGSLSSSINKVLKIIARVYVEYYQNTPLLVQFMIV 83

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y  +  +        +  
Sbjct: 84  YYGLPLISNYVLMPSIYW 101


>gi|189349963|ref|YP_001945591.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|189333985|dbj|BAG43055.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 229

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ V S    + L L    +++  H +  +A+   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVQTIELSVLSLATAVALGLIG-AVAKLSHNRVLRAIATGY--TTLIRSVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYSIQIWLNQFTDLVGWTQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GAAYGMSGARVFVRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T      IL+   IYL+++ +  L + +L  + ++  + 
Sbjct: 188 TFNMFFFILVAALIYLAITTVSNLVLIQLEKRYSMGVRH 226



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  L+   +  A  +G +    +LS N+++  I   Y  + R++P LV+
Sbjct: 6   FGPVLWAGTVQTIELSVLSLATAVALGLIGAVAKLSHNRVLRAIATGYTTLIRSVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|167725481|ref|ZP_02408717.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei DM98]
 gi|217424148|ref|ZP_03455647.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|237508257|ref|ZP_04520972.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|254186972|ref|ZP_04893487.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254263010|ref|ZP_04953875.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
 gi|157934655|gb|EDO90325.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|217392613|gb|EEC32636.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 576]
 gi|235000462|gb|EEP49886.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|254214012|gb|EET03397.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710a]
          Length = 235

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 13/234 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
             + + F        L      +     I  F    G ++ + A  + R +       L 
Sbjct: 14  RELNVQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAG-MFRAYGPAVLNVLA 72

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI   LI G P +V +     L+F  P+L      G S       +  +A++  + A+
Sbjct: 73  QVYIE--LIRGTPIVVQVMF---LYFALPLLAHVRIDGLS-------AAVVAITLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR  L+++P+G  EA +A+GL+  +    ++ P A R +I PL +Q +  LK++SL
Sbjct: 121 LAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSL 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + +G  +L   G  II    QA+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 181 FIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRI 234


>gi|300690824|ref|YP_003751819.1| amino acid transmembrane abc transporter protein [Ralstonia
           solanacearum PSI07]
 gi|299077884|emb|CBJ50523.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum PSI07]
          Length = 231

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 21/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HF 211
           +P+  + +      +   ++   L++      FV +  L I ++L     +         
Sbjct: 1   MPNFDLSMLLSGQYHQWLVTGFLLSVKLTVLAFVLALPLAIAVALLRLAPAAPLRAIGQT 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + +  + +PLL    F  FG P L+ +++K  L+                ++ E  S  I
Sbjct: 61  YVEAIRNVPLLAHMLFWYFGAPQLLPMSVKTWLY---------------NLNYEAASAVI 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL  YTAA++AE +RSG+ ++P+ Q+EA+ ALGL   +A RLV+LPQ++R  +PP+ SQ 
Sbjct: 106 ALVLYTAAYMAEDIRSGIRSIPKEQLEASRALGLGFLQAMRLVVLPQSLRVTVPPMVSQT 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LNL KNSS+A+ +G A+L+     + + T +  E        YLS+S+ I +F      +
Sbjct: 166 LNLWKNSSIAMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLSISMAITVFSAWYQHR 225

Query: 392 IALK 395
             ++
Sbjct: 226 YPVR 229



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GF+ +  L     + A  +   V   RL+    +  I + YVE  RN+P 
Sbjct: 11  SGQYHQWLVTGFLLSVKLTVLAFVLALPLAIAVALLRLAPAAPLRAIGQTYVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           L  + F Y     +LP+   + +  
Sbjct: 71  LAHMLFWYFGAPQLLPMSVKTWLYN 95


>gi|323527325|ref|YP_004229478.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323384327|gb|ADX56418.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 225

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 6/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           KI + + V+GIV       L R    K  +     Y++ F       L
Sbjct: 13  LPTLWTGAIVTFKITLIAIVVGIVWGTVLAML-RLSSFKPFEWFAKGYVTIFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P + Q      + +     S  +A S + AA+ +EI+R+G+ AVPRG
Sbjct: 69  VMVLLWFFL--IVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ AA ALG+ + +A RL++LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNAAFALGMGYGQAMRLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G  +E++L     Y  + ++ +  +  L  K+A 
Sbjct: 187 IGDRDGTNVEMVLFAGACYFVICVIASSLVKGLQKKVAR 225



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GT++   RLS+ K   W  + YV +FR+IP ++V+ + 
Sbjct: 16  LWTGAIVTFKITLIAIVVGIVWGTVLAMLRLSSFKPFEWFAKGYVTIFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|227514192|ref|ZP_03944241.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087455|gb|EEI22767.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 484

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 11/205 (5%)

Query: 190 FVFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
            +   V+G+ L+ LF   L             +  +  ++  G+P +V   L + ++   
Sbjct: 290 TLLLTVVGVALAILFGGILGVMGISDRKIFSSISSVIIYIFRGMPMIV---LAFFIYIGM 346

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P +            P F +  + L     A++  IV+ G  AV RGQ EAA +LGL + 
Sbjct: 347 PSVIG-------HKIPLFTAGILTLMLDEGAYVGAIVKGGFQAVDRGQWEAARSLGLPYY 399

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           K    V++PQ ++ ++P L +Q +  LK++S+  A+G  +L   G  II +  +  +I L
Sbjct: 400 KTLVKVIMPQGIKIMVPSLVNQLIITLKDTSILSAIGVMELTQTGTVIIARNMEGFKIWL 459

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIA 393
           I   IY+ +  ++    N +  K+A
Sbjct: 460 IIGVIYIIIITLLTWLSNYVQRKMA 484



 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 39/75 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   A+L G   T  L   G+  A + G ++G   +S  K+ + I  V + +FR +P +V
Sbjct: 278 SNKDALLSGLGETLLLTVVGVALAILFGGILGVMGISDRKIFSSISSVIIYIFRGMPMIV 337

Query: 144 VIFFLYKSVLSVLPI 158
           + FF+Y  + SV+  
Sbjct: 338 LAFFIYIGMPSVIGH 352


>gi|187927462|ref|YP_001897949.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|241661992|ref|YP_002980352.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|309779836|ref|ZP_07674591.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia
           sp. 5_7_47FAA]
 gi|187724352|gb|ACD25517.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|240864019|gb|ACS61680.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|308921413|gb|EFP67055.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia
           sp. 5_7_47FAA]
          Length = 227

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 6/231 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +N   +      M  + +I   + ++GIV       + R    K  +    
Sbjct: 1   MAYQFDFSSINVDNMRVLGEGMLLSLEITGTAILVGIVWGTLL-AMMRLSGIKPLQVFGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y++ F       LV++ L + L   + +   FN    + +     S  +A + + AA+ 
Sbjct: 60  AYVNLFRSIP---LVMVLLWFFLIVPQVLQKIFNLSPATDMR--MTSALVAFALFEAAYY 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +V RGQM AA A+G+T+ +A RLV+LPQA R++IP L +Q + L +++SL 
Sbjct: 115 SEIIRAGIQSVSRGQMFAAYAMGMTYGQAMRLVILPQAFRNMIPLLLTQAIVLFQDTSLV 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +D  +    I  + G+ +E++L     Y  +    ++ + RL  K+
Sbjct: 175 YVSALSDFFTQAYNIGERDGRIVELLLFAGLCYFVICFGASVLVKRLQKKV 225



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 38/87 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G + +  +  + ++   + GTL+   RLS  K +    + YV +FR+IP ++V+
Sbjct: 15  MRVLGEGMLLSLEITGTAILVGIVWGTLLAMMRLSGIKPLQVFGQAYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            + +  V  VL    +          +
Sbjct: 75  LWFFLIVPQVLQKIFNLSPATDMRMTS 101


>gi|37676942|ref|NP_937338.1| arginine transporter permease subunit ArtQ [Vibrio vulnificus
           YJ016]
 gi|37201486|dbj|BAC97308.1| ABC-type arginine transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 229

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 7/210 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  +G+VL++         H       P   + T L      LV++ + + 
Sbjct: 15  WMTIQLALVSLAVGLVLAVVFAGGEMTRHPLV--KWPTTALVTVLRGLPELLVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  IALS   A++ ++ +R  L AV +GQ EAA AL
Sbjct: 73  -----STQVLFLLTGDFIEVSPFLSGVIALSLIFASYASQTIRGALKAVNKGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +    ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GMSKSRTFFRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                    IYL ++++    +  ++AK +
Sbjct: 188 FTWYATAAAIYLVITLVTQRVVKIIDAKFS 217


>gi|261250641|ref|ZP_05943216.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
 gi|260939210|gb|EEX95197.1| amino acid ABC transporter permease protein [Vibrio orientalis CIP
           102891]
          Length = 223

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 15/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+       FS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLDLMPILLKYLGTTMEMATWGLFFSLILSVILANI-----RVFRIPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS F   G P LV + L   L++  P +  F           F +  I L+ + AA++A
Sbjct: 58  YISFF--RGTPLLVQLFL---LYYGLPQIFPF-----LVGLDAFGAAVIGLTLHFAAYMA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA 
Sbjct: 108 ESIRAAIIGIDRSQMEASLSVGMTTPQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 168 TLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G+  + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLFFSLILSVILANIRVFRIPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPI 158
           Y  +  + P 
Sbjct: 75  YYGLPQIFPF 84


>gi|91225246|ref|ZP_01260414.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91189885|gb|EAS76157.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 225

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   + V+G+ +S+    ++R+            +I  F   G P L
Sbjct: 10  FPTYLQGLWTTVWLVGLALVIGLCVSIPL-AVARNSTNYALSLPSWGFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ MI         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFMILWCFKVAEKRF 217



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 35/102 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++    +   +   R S N  ++     ++  FR  P LV ++ +
Sbjct: 13  YLQGLWTTVWLVGLALVIGLCVSIPLAVARNSTNYALSLPSWGFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|27367225|ref|NP_762752.1| arginine transporter permease subunit ArtQ [Vibrio vulnificus
           CMCP6]
 gi|27358793|gb|AAO07742.1| Arginine ABC transporter, permease protein ArtQ [Vibrio vulnificus
           CMCP6]
          Length = 229

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 11/212 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATR--LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
               ++ + S  +G+VL++      ++RH   K     P   + T L      LV++ + 
Sbjct: 15  WMTIQLALVSLAVGLVLAVVFAGGEMTRHRLVKW----PTTALVTVLRGLPELLVVLFIY 70

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +           F   G       F+S  IALS   A++ ++ +R  L AV +GQ EAA 
Sbjct: 71  FG-----STQVLFLLTGDFIEVSPFLSGVIALSLIFASYASQTIRGALKAVNKGQREAAS 125

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALG++  +    ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T 
Sbjct: 126 ALGMSKSRTFFRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATH 185

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +A         IYL ++++    +  ++AK +
Sbjct: 186 EAFTWYATAAAIYLVITLVTQRAVKIIDAKFS 217


>gi|37678191|ref|NP_932800.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|37196930|dbj|BAC92771.1| ABC-type amino acid transport system, permease component [Vibrio
           vulnificus YJ016]
          Length = 236

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS VL ++L+       R F       L  L
Sbjct: 16  FDFNYMLELLPILLKYLGTTMEMAILGLVFSLVLAVILANI-----RVFRVPILDPLSQL 70

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P++   +          F +  I L+ + AA++
Sbjct: 71  YISFF--RGTPLLVQLFLLYYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYM 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA
Sbjct: 120 AESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLA 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++         K+
Sbjct: 180 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVLVLTRVQIWAENKL 230



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 35/71 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + ++  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 28  LLKYLGTTMEMAILGLVFSLVLAVILANIRVFRVPILDPLSQLYISFFRGTPLLVQLFLL 87

Query: 149 YKSVLSVLPIP 159
           Y  +  + PI 
Sbjct: 88  YYGLPQIFPIM 98


>gi|16519952|ref|NP_444072.1| probable amino-acid ABC transporter permease y4tF [Sinorhizobium
           fredii NGR234]
 gi|2501399|sp|P55660|Y4TF_RHISN RecName: Full=Probable amino-acid ABC transporter permease protein
           y4tF
 gi|2182636|gb|AAB91859.1| probable amino-acid ABC transporter permease y4tF [Sinorhizobium
           fredii NGR234]
          Length = 238

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 8/218 (3%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  L           +  ++S   G V S FA  + +       K   +LYI  F   G
Sbjct: 18  WHDYLGPLGRGAWVTIQFTLYSMFFGAVCS-FAFGIGKLSKNPFVKGFSILYIEIF--RG 74

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV +   + L F  P+ G  + +G        ++  +ALS    A+ AEIVR  + A
Sbjct: 75  TSLLVQL---FWLFFALPIAG--DMMGIDLRLSPVVAGVLALSLNLGAYGAEIVRGAIQA 129

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V   Q EAA AL  +  +A   V LPQA+  ++P  ++  +  LK++SL   +   DL  
Sbjct: 130 VSPSQYEAATALNFSSSQALWRVALPQAIPEMMPSFSNLAIAALKDTSLVSLITLHDLTF 189

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
               + N    +  +  + + +Y  ++++++ FM  + 
Sbjct: 190 AAEQLRNFYQDSTTVYTMVLLMYFGIALVLSFFMRLIE 227



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G   T       M    +     G G+LS N  V     +Y+E+FR    LV 
Sbjct: 21  YLGPLGRGAWVTIQFTLYSMFFGAVCSFAFGIGKLSKNPFVKGFSILYIEIFRGTSLLVQ 80

Query: 145 IFFLYKSVL 153
           +F+L+ ++ 
Sbjct: 81  LFWLFFALP 89


>gi|256965481|ref|ZP_05569652.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis HIP11704]
 gi|257415732|ref|ZP_05592726.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis AR01/DG]
 gi|307273809|ref|ZP_07555031.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|256955977|gb|EEU72609.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis HIP11704]
 gi|257157560|gb|EEU87520.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ARO1/DG]
 gi|306509494|gb|EFM78542.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|315174637|gb|EFU18654.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
          Length = 237

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 18/248 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +      S L   P   +     F      +              + + + ++   L +F
Sbjct: 1   MFLLANISWLEEGPFALYRWEALF------QDWRIFGQAFLYTILLSLGAILVAFALGIF 54

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              LS     K   A+  +Y+  F     P L+   + Y   +  P+L        +T+ 
Sbjct: 55  FGSLSAT-KSKLLHAISRVYVEFF--QNTPLLIQFIVVY---YGFPLLSPLLSFSITTI- 107

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                  + +  Y  A+I+E+VRSG+ AVPRGQ EAA + GLT+ +  R V+LPQA R +
Sbjct: 108 -----AILCVGFYHGAYISEVVRSGIGAVPRGQFEAAYSQGLTYGQTMRYVILPQAWRIM 162

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPLT+Q +NL+KN+S    +  AD++    +  +     I    +  F+Y  L   +A 
Sbjct: 163 LPPLTNQVVNLIKNTSTVAIISGADVMFAANSWSSVNLNYIPAFALAGFLYFILCFPLAN 222

Query: 384 FMNRLNAK 391
              ++  K
Sbjct: 223 LARKMEEK 230



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                  F+ T  L+   ++ A  +G   G+   + +KL+  I RVYVE F+N P L+  
Sbjct: 27  WRIFGQAFLYTILLSLGAILVAFALGIFFGSLSATKSKLLHAISRVYVEFFQNTPLLIQF 86

Query: 146 FFLYKSVLSVLP 157
             +Y     + P
Sbjct: 87  IVVYYGFPLLSP 98


>gi|258654116|ref|YP_003203272.1| polar amino acid ABC transporter inner membrane subunit
           [Nakamurella multipartita DSM 44233]
 gi|258557341|gb|ACV80283.1| polar amino acid ABC transporter, inner membrane subunit
           [Nakamurella multipartita DSM 44233]
          Length = 307

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 116/272 (42%), Gaps = 19/272 (6%)

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
             +  +   VF  +   +V + +   +       +               L     T+  
Sbjct: 17  RRLNLILSVVFGIVLAALVWWIISVLIEKNQLTAEKWSPFLEIQNWTTYLLPGLWATLQA 76

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            A   V +  +G +  +     +R       + +  + +  F    +P ++L+   +QL 
Sbjct: 77  AALSVVIALPIGAIFGI-----ARMSDHTWVRWVAGVVVEFF--RSIPVIILMLFAFQLW 129

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F                S  F ++ I L  Y  + +AE+ R+G++AVP+GQ EAA ALGL
Sbjct: 130 FAI-----------LGTSSPFAAVVIGLVLYNGSVLAEVFRAGILAVPKGQSEAAYALGL 178

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTIINQTGQAI 364
              +   L+LLPQA+ S++P + SQ + ++K+++L    VG+ +L     T  +  G  +
Sbjct: 179 RKTQVMTLILLPQAVTSMLPAVVSQLVVIVKDTALGGILVGYVELRRAANTSASNYGNLL 238

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              ++   IY+ +++ +  F + L  K+  + 
Sbjct: 239 PTYVVVALIYILINLALGWFSHWLERKLRTRR 270



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 68/165 (41%), Gaps = 22/165 (13%)

Query: 14  SRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
            R   LYD      R  N+ + ++  ++L  +  W ++ +    + +             
Sbjct: 3   ERATVLYDIPGPKARRLNLILSVVFGIVLAALVWWIISVLIEKNQLT------------- 49

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
                +   P+    ++ T +L G   T   A   ++ A  IG + G  R+S +  V W+
Sbjct: 50  ----AEKWSPFLEIQNWTTYLLPGLWATLQAAALSVVIALPIGAIFGIARMSDHTWVRWV 105

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
             V VE FR+IP ++++ F ++   ++L        +  G+ L N
Sbjct: 106 AGVVVEFFRSIPVIILMLFAFQLWFAILGTSSPFAAVVIGLVLYN 150


>gi|115358998|ref|YP_776136.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115284286|gb|ABI89802.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 219

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S  LG+V+ L    + R    +    L   Y+S  L+ G P
Sbjct: 9   HTLPVMVKGALLTLKFAVASMALGLVVGLVV-AIMRIGSNRLASGLAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y   +  P L       G T+ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVY---YGLPDL-------GITLDPT-TAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA +LGLTH +  R ++ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAAAHSLGLTHVQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    +Y  LS ++     R+  +++L
Sbjct: 175 QEVIAATFQPLPLYLAAAALYWVLSTLLTRLQGRVETRLSL 215



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G + T   A + M    ++G +V   R+ +N+L + + + YV + R  P LV +F 
Sbjct: 13  VMVKGALLTLKFAVASMALGLVVGLVVAIMRIGSNRLASGLAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDLGITLDPTTAGIFTLTLN 97


>gi|330429986|gb|AEC21320.1| glutamate/aspartate transport system permease protein [Pusillimonas
           sp. T7-7]
          Length = 229

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 2/221 (0%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLV 236
                +       VF+  L I+ +L    L       +     PL +++   +  L  L 
Sbjct: 9   IQRSWVYLFRDGMVFTLKLTIMSALGGLILGTLLAMCRLSSIKPLSWVAGTYVNLLRALP 68

Query: 237 LIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           LI + +  +F  P +G              F S  +  + + AA+  EI+R+G+ +VPRG
Sbjct: 69  LILVIFWFYFLVPYIGAWLTGSSRPVAVGGFTSALVTFTLFEAAYFCEIMRAGIQSVPRG 128

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  A  ALGLT+ +    V+LPQA R++ P L +Q + L +++SL   +   D +     
Sbjct: 129 QHSAGYALGLTYWQVMGKVVLPQAFRNMTPILLTQTIVLFQDTSLVYVLSLTDFLGAAVK 188

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  + G+ IE+ +    IY  +S   +L +  L  + ++  
Sbjct: 189 VAQRDGRLIEMYMFVALIYFIMSYAASLLVRYLRQRTSIVR 229



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 37/75 (49%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+      G V T  L     +   I+GTL+   RLS+ K ++W+   YV + R +P ++
Sbjct: 12  SWVYLFRDGMVFTLKLTIMSALGGLILGTLLAMCRLSSIKPLSWVAGTYVNLLRALPLIL 71

Query: 144 VIFFLYKSVLSVLPI 158
           VIF+ Y  V  +   
Sbjct: 72  VIFWFYFLVPYIGAW 86


>gi|296162980|ref|ZP_06845757.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295886774|gb|EFG66615.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 225

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 6/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           KI V + V GI+       L R    K  +     Y++ F       L
Sbjct: 13  LPTLWTGAVVTLKITVIAIVFGIIWGTVLAML-RLSSFKPFEWFAKGYVTIFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P + Q      + +     S  +A S + AA+ +EI+R+G+ AVPRG
Sbjct: 69  VMVLLWFFL--IVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ AA ALG+ + +A RL++LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNAAFALGMNYAQAMRLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G  +E++L     Y  + ++ +  +  L  K+A 
Sbjct: 187 IGDRDGTNVEMVLFAGACYFVICVIASSLVKGLQKKVAR 225



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  +    ++   I GT++   RLS+ K   W  + YV +FR+IP ++V+ + 
Sbjct: 16  LWTGAVVTLKITVIAIVFGIIWGTVLAMLRLSSFKPFEWFAKGYVTIFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|239831828|ref|ZP_04680157.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239824095|gb|EEQ95663.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 293

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 5/218 (2%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 +    K+   S ++G ++SL  T  +R  + +  + L   Y+  F   G P L 
Sbjct: 77  PRYWSGLLITLKLVAVSIIIGALISLPITA-ARMSNNRWLRGLAFGYVYFF--RGTPLLA 133

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              L Y   F        +          +    +A S  TAA+ AEI+R  + +V  GQ
Sbjct: 134 QTFLIYY-GFGTFRPFLESIGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIQSVALGQ 192

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E A ALG++ R     V+LPQA+   + P  ++ + ++K S++   +   DL+      
Sbjct: 193 WEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRA 252

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            ++T    +  L    IYL +   +    + L  ++  
Sbjct: 253 YSRTFD-FQTYLWAAVIYLVIVECLRHVWDFLERRLTR 289



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 49/146 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      G + T  L    +I   +I   + A R+S N+ +  +   YV  FR  P L
Sbjct: 73  ETYGPRYWSGLLITLKLVAVSIIIGALISLPITAARMSNNRWLRGLAFGYVYFFRGTPLL 132

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
              F +Y    +  P  +   +  F     N  +   +L         +   +  + L  
Sbjct: 133 AQTFLIYYGFGTFRPFLESIGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIQSVALGQ 192

Query: 203 FATRLSRHFHEKTGKALPLLYISTFL 228
           +    +    ++      +L  +  +
Sbjct: 193 WEGAAALGISKRVTFWKVILPQALIV 218


>gi|254449912|ref|ZP_05063349.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Octadecabacter antarcticus 238]
 gi|198264318|gb|EDY88588.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Octadecabacter antarcticus 238]
          Length = 219

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 101/233 (43%), Gaps = 14/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +      + L      +    +  +   ++ + L L      R  +    + +     
Sbjct: 1   MEWDWDFCIQILPQLWEGVKVTIQATILGTMIAMTLGLGLAIARRSTNGWISRPVGFF-- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P LV +   + +  D  +L                +  + L  + + + AE+
Sbjct: 59  -AELIRGTPLLVQLYFLFYILPDLGLLL-----------SPLTAGVVGLGLHYSTYTAEV 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ A+P GQ EA+ A  LT R+    +++PQA+  +IP L + ++ + K + L  A+
Sbjct: 107 YRTGIDAIPSGQWEASKATNLTARQTWVHIIIPQAIPPMIPALANYFVAMFKETPLLAAI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +L++   ++ N   + +E + +    +L++S+   + + +L A+ A  ++
Sbjct: 167 TVLELMNQARSVANYHYKYVEPMTMVGLFFLAVSVPSVILLRKLEARYAPTDR 219



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T      G + A  +G  +   R S N  ++     + E+ R  P LV ++FL
Sbjct: 15  LWEGVKVTIQATILGTMIAMTLGLGLAIARRSTNGWISRPVGFFAELIRGTPLLVQLYFL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  +         G+ L+    +        +A 
Sbjct: 75  FYILPDLGLLLSPLTAGVVGLGLHYSTYTAEVYRTGIDAI 114


>gi|251797221|ref|YP_003011952.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247544847|gb|ACT01866.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 223

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 11/169 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +     ++I G P LV + + +                   +   F +  I  +    A+
Sbjct: 57  IARFYVWIIRGTPLLVQLFIIFY-----------GLPSVGILIDAFPAAVIGFTLSVGAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI+R+ ++++P+GQ EAA +LG T  +A R ++LPQA R  +PPL++ +++L+K++SL
Sbjct: 106 GSEIIRAAIVSIPKGQWEAAFSLGETRLQALRRIILPQAARVTVPPLSNSFISLVKDTSL 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           A  V   +L   G  I     + + I      IYL    ++AL   +L 
Sbjct: 166 AATVTVTELFQKGQQITAAVYEPLLIYCEVALIYLIFCSILALLQRQLE 214


>gi|170748674|ref|YP_001754934.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170655196|gb|ACB24251.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 240

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/225 (28%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS    T+ T    +V +F LG ++ +      R    K   A+   Y+  F    +P
Sbjct: 24  MLLSGLMWTITTALCSWVIAFFLGSLIGVL-----RTLPSKPANAIGTAYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + L Y +  +       + I     +P F +  + L  +TA+ +AE VR+G+ ++P
Sbjct: 77  LLVQMFLWYFVLPEVVPTRIGDAIKQLPDAP-FYTAVVCLGFFTASRVAEQVRAGIQSLP 135

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A  A+G T  +  R VLLP A R I+PP+TS++LN LKN+S+A+ +G  +L +  
Sbjct: 136 RGQRMAGTAMGFTTYQTYRYVLLPNAYRIILPPMTSEFLNNLKNTSVALTIGLLELTARA 195

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++   + Q  E       +Y+ +++++      L   +A+  ++
Sbjct: 196 RSMQEFSFQVFEAFTAATILYVIINLVVVTAATFLEKAVAIPGQR 240



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 39/76 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + +Y   +L G + T   A    + A  +G+L+G  R   +K    I   YVE+FRN+P 
Sbjct: 18  NGTYLDMLLSGLMWTITTALCSWVIAFFLGSLIGVLRTLPSKPANAIGTAYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  +  V+P
Sbjct: 78  LVQMFLWYFVLPEVVP 93


>gi|261821755|ref|YP_003259861.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261605768|gb|ACX88254.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 321

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 1/264 (0%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR    L  +F     + S+   P     +    F N   L+    T+   A   VFS +
Sbjct: 35  FRFAGALFSLFIFAGIIQSIALNPRWEWAVFAEWFFNPVILTGLAQTLLLTALGTVFSII 94

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQF 254
            G  L+L     S      +   + L      ++  +       L  +L    P     F
Sbjct: 95  FGTALALARLSPSYLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGVPFTSIIF 154

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  +  +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL   + T  +
Sbjct: 155 LRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGGRRTVRI 214

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++    Y
Sbjct: 215 ILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWY 274

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ ++++    +   ++    +
Sbjct: 275 LLITTVLSIVQYYVERYVSRGAVR 298


>gi|227115098|ref|ZP_03828754.1| putative ABC transporter, permease [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 314

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR    L  +F     + S+   P     +    F N   L+    T+   A   +FS +
Sbjct: 31  FRVAGALFSLFIFAGVIQSIALNPRWEWAVFAEWFFNPVILAGLGQTLLLTALGTLFSII 90

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-- 253
            G  L+L     +R         L  LYI  F    L  +++I   +   +D+  LG   
Sbjct: 91  FGTALAL-----ARLSPSYLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGIPF 145

Query: 254 ----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F       +  +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL   +
Sbjct: 146 TSVVFLRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPSSR 205

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            T  ++LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++
Sbjct: 206 RTVRIILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMV 265

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++++    +   ++    +
Sbjct: 266 ATIWYLLITTVLSVIQYYVERYVSRGAVR 294


>gi|220909976|ref|YP_002485287.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7425]
 gi|219866587|gb|ACL46926.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7425]
          Length = 283

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 22/238 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R   F      T   I + S VL +VL        R       + + ++Y+   ++ G P
Sbjct: 47  RYFPFLVQATVTTLGISITSMVLAMVLG-GIGAWGRLSKWALVRGVAIVYVE--VVRGTP 103

Query: 234 TLVLIALK---------------YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           TLV + L                  L F+     Q N +     +  F    + LS    
Sbjct: 104 TLVQLLLWGFGIGTVMSQLGFDPRALAFNLLTPLQSNSLVSPVFNFIFY-GVLGLSFNYG 162

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++ E+ R+G+ ++ RGQ EAA++LGL   +    ++LPQA+R  IPP T+ ++ L+++S
Sbjct: 163 AYLTEVFRAGIESISRGQTEAALSLGLDSVQTMGRIVLPQAIRLTIPPFTNNFITLIQDS 222

Query: 339 SLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L   +G  +L  V  +           + + ++    YL+L   ++     L  K+A
Sbjct: 223 ALLSTIGVTELQQVTSSFAYPLTNPNDKLFVFILGALFYLALCYPLSRLARYLERKLA 280



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 36/73 (49%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   ++   V T  ++ + M+ A ++G +   GRLS   LV  +  VYVEV R  P LV
Sbjct: 47  RYFPFLVQATVTTLGISITSMVLAMVLGGIGAWGRLSKWALVRGVAIVYVEVVRGTPTLV 106

Query: 144 VIFFLYKSVLSVL 156
            +      + +V+
Sbjct: 107 QLLLWGFGIGTVM 119


>gi|254286188|ref|ZP_04961148.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|262192391|ref|ZP_06050544.1| ABC-type amino acid transport system permease component [Vibrio
           cholerae CT 5369-93]
 gi|150423857|gb|EDN15798.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|262031744|gb|EEY50329.1| ABC-type amino acid transport system permease component [Vibrio
           cholerae CT 5369-93]
          Length = 365

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 123 WIWLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 182

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 183 RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSQGSEIDKLLR 232

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 233 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 292

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 293 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYS 352

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 353 IWLEGKLHTGHKR 365



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   L        L   +       +     +       +    +     + LS +    
Sbjct: 217 LPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMG 276

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +     +P +  +   +F   +LVLI   +  L   +      N++G +T S  F
Sbjct: 277 LIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVF 336

Query: 267 MSLYIALSCYTAAFIA 282
           ++L   + C+  +  +
Sbjct: 337 VALVFWIFCFGMSRYS 352


>gi|27364436|ref|NP_759964.1| amino acid ABC transporter permease [Vibrio vulnificus CMCP6]
 gi|27360555|gb|AAO09491.1| Amino acid ABC transporter, permease protein [Vibrio vulnificus
           CMCP6]
          Length = 223

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS VL ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMAILGLVFSLVLAVILANI-----RVFRLPILDPLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P++   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++         K+
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVLVLTRVQIWAENKL 217



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 35/71 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + ++  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMAILGLVFSLVLAVILANIRVFRLPILDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  + PI 
Sbjct: 75  YYGLPQIFPIM 85


>gi|257465093|ref|ZP_05629464.1| arginine transporter permease subunit ArtQ [Actinobacillus minor
           202]
 gi|257450753|gb|EEV24796.1| arginine transporter permease subunit ArtQ [Actinobacillus minor
           202]
          Length = 223

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L            + + S ++G++LS+    L         K      +   L+ 
Sbjct: 1   MFTEYLPLIYSATLMTLGLALASLIVGLLLSILFVSLETSKLSVISKPTT---VFLALLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +          G       F    +ALS   AA+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIYFGSTELIEK----LTGEYIEFSAFNCGVLALSLIFAAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPIGQWESGTALGLSRGYTFIHIIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVHDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q      +   IYL+++++  + +  L  +    E+
Sbjct: 174 RQSELINTNEHQPFTWFGLAALIYLAITLVSQVIIRYLELRFTRFER 220


>gi|91782895|ref|YP_558101.1| ABC lysine/arginine/ornithine transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
 gi|91686849|gb|ABE30049.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 233

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 3/212 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V S V  ++L L     ++    +  +A+   Y  T LI  +P LVL+ L +    
Sbjct: 22  IELSVLSLVAAVLLGLAGAA-AKLSFSRPLRAIATGY--TTLIRSVPDLVLMLLLFYSIQ 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F++  + L     A+  E  R   +AVPRGQ+EA  A G++
Sbjct: 79  IAVNDLTDALNLPQFDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMS 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         T      
Sbjct: 139 GARVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFF 198

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ILI   IYL+++ +  L +  L  + +   + 
Sbjct: 199 ILIAALIYLAITTVSNLVLIWLEKRYSTGVRH 230


>gi|170699412|ref|ZP_02890457.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170135668|gb|EDT03951.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 219

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S  LG+V+ L    + R    +    L   Y+S  L+ G P
Sbjct: 9   HTLPVMVKGALLTLKFAVASMALGLVVGLVV-AIMRIGSNRLVSGLAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y   +  P L       G T+ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVY---YGLPDL-------GITLDPT-TAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA +LGLTH +  R ++ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAAAHSLGLTHVQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    +Y  LS ++     R+  +++L
Sbjct: 175 QEVIAATFQPLPLYLAAAALYWVLSTLLTRLQGRVETRLSL 215



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 42/85 (49%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G + T   A + M    ++G +V   R+ +N+LV+ + + YV + R  P LV +F 
Sbjct: 13  VMVKGALLTLKFAVASMALGLVVGLVVAIMRIGSNRLVSGLAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDLGITLDPTTAGIFTLTLN 97


>gi|116619007|ref|YP_819378.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116097854|gb|ABJ63005.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 213

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 15/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                             + + ++ ++L  F   L +   +K  + +  +Y+  F    L
Sbjct: 5   QNNFPTFLQGFGYTLLSSIIALIISMILGTFFAIL-QILPQKWAQKIGNVYVQVFRNIPL 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +                  F  +        F +  IALS YT+AFIAE VR+G+++V
Sbjct: 64  LIITFFF--------------FLVVAKVIPMNGFAAGTIALSLYTSAFIAETVRAGILSV 109

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQME A A GL+  ++ R ++LPQA +  +P L +Q++NL+KNSS+   VG  DL+  
Sbjct: 110 DNGQMEGARANGLSFNQSMRYIVLPQAFKIALPSLGNQFINLVKNSSILAFVGGLDLMYQ 169

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +   T       +I    YL +++ ++ +M  L  K+ 
Sbjct: 170 GNMVAATTFDTFSTYIIVALFYLVITLPLSYYMQNLERKLK 210



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 37/70 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+GT     ++   K    I  VYV+VFRNIP L++ FF 
Sbjct: 11  FLQGFGYTLLSSIIALIISMILGTFFAILQILPQKWAQKIGNVYVQVFRNIPLLIITFFF 70

Query: 149 YKSVLSVLPI 158
           +  V  V+P+
Sbjct: 71  FLVVAKVIPM 80


>gi|257482805|ref|ZP_05636846.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|331012328|gb|EGH92384.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 229

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGV 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|107026377|ref|YP_623888.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116692434|ref|YP_837967.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105895751|gb|ABF78915.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116650434|gb|ABK11074.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 218

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     +      L    +T++  A  FV S VLG++L+L           K  +   + 
Sbjct: 1   MFFQNAIDFLPILLKGAVVTIEITACAFVLSSVLGLILALL----------KVSRNRAVA 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              + +I  +  L +I   + ++F  P L              F +  + L    +A+ A
Sbjct: 51  TAGSTIINVIRGLPIIVQLFYMYFVLPDL--------GVQLSAFQAGVLGLGIAYSAYQA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ A+ RGQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A 
Sbjct: 103 ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  A++   G  I + T Q + +  +   +YL+L + +   +NRL  ++A++ 
Sbjct: 163 TITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFAVNRLGKRLAVRR 216


>gi|325526097|gb|EGD03757.1| glutamine ABC transporter permease protein [Burkholderia sp. TJI49]
          Length = 218

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I  F  V G V+ + A  + R +  K    L  +YI
Sbjct: 1   MNFDWSAIWTALPDLMDGVRLTVFIAFFGLVGGFVVGMIAG-MFRAYGPKAMNVLAQVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +     L+F  P+L      G         +  IA++  + A++AE+
Sbjct: 60  E--LIRGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIIAITVNSGAYLAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++P+G  EA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +
Sbjct: 108 VRGALLSIPKGLTEAGLAMGLSMPRVLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  II    QA+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 168 GVGELTRKGQEIIAGNFQAVEIWSAVAVIYLILTGVMTLTLRLVEKRMKI 217


>gi|307319174|ref|ZP_07598604.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306895281|gb|EFN26037.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 218

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 14/226 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                           +   +F  G V  L    L R    +  +     +I  F   G 
Sbjct: 7   WNEFLVIVAAAQWTIALSAIAFAGGSVGGLLV-ALMRVADTRALRLSATGFIRVF--QGT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + L +           F           +++  IAL+ + +AF+ EI R  + AV
Sbjct: 64  PLLMQLFLVF-----------FGMNIFGFAINPWIAATIALALHASAFLGEIWRGCIEAV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA ALGL + ++ R V+LPQA R  + P     + L+K +SLA  +GF +L   
Sbjct: 113 PKGQREAATALGLRYFRSMRHVILPQAARIAVAPTVGFLVQLIKGTSLASIIGFTELTRQ 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  I N T     +      +Y  L   ++L   R+  + +    +
Sbjct: 173 GQIINNATFSPFLVFGTVATVYFLLCWPLSLIARRMETRFSRATAR 218


>gi|71064874|ref|YP_263601.1| ABC basic amino acid transporter, inner membrane subunit
           [Psychrobacter arcticus 273-4]
 gi|71037859|gb|AAZ18167.1| ABC basic amino acid transporter, inner membrane subunit
           [Psychrobacter arcticus 273-4]
          Length = 244

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V S ++G+VL L     ++  +    + +  +Y +T        LVL       
Sbjct: 17  VTIQLAVTSLIIGMVLGLLG-ATAKLSNIWLLRKIATVYTATMRGIPELLLVLFIYYGGS 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +L +F +     +   F    +ALS    A+  EI R  +  +P GQ EAA A+G
Sbjct: 76  ILLMSILKKFGYNDYVEI-SAFWGGVMALSIAFGAYATEIFRMSIQEIPIGQQEAAQAIG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +    + LPQ  +  +P L + +L LLK+++L   VG  D++         T Q  
Sbjct: 135 MRPFQTFYRITLPQVWQIALPGLGNLFLVLLKDTALVSVVGLKDIMYQSSRAAQSTQQPF 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    IYL L+++I  FM  L  +
Sbjct: 195 TFYMAAAIIYLGLTMLITGFMMWLEWR 221



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA + +I   ++G L    +LS   L+  I  VY    R IP L++
Sbjct: 7   FGALLLSGATVTIQLAVTSLIIGMVLGLLGATAKLSNIWLLRKIATVYTATMRGIPELLL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           + F+Y     +L            + ++   
Sbjct: 67  VLFIYYGGSILLMSILKKFGYNDYVEISAFW 97


>gi|87122517|ref|ZP_01078396.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Marinomonas sp. MED121]
 gi|86162159|gb|EAQ63445.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Marinomonas sp. MED121]
          Length = 229

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 1/191 (0%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    KT + +   Y +T +      L ++ + +        +              F 
Sbjct: 39  AKLSSVKTLQWIANGY-TTIIRGIPELLTVLIIYFGATTVLMAVAGLFGYEDYIEIGPFA 97

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +   AL     A+  E+ R  L ++P+GQ EAA+ALG+   +    ++LPQ  R  +P L
Sbjct: 98  AGVTALGLTFGAYATEVFRGALQSIPKGQNEAAVALGMGRVRTFYRIILPQVWRMALPGL 157

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L LLK+++L   VG  D++      ++ T +          +YL L+I+    +  
Sbjct: 158 GNLFLVLLKDTALVSVVGLDDIMRKANIAVSSTKEPFLFYSAAAVLYLGLTIISMGVVYF 217

Query: 388 LNAKIALKEKK 398
           L  +     K+
Sbjct: 218 LEKRANRGIKR 228


>gi|330900967|gb|EGH32386.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330980616|gb|EGH78719.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 231

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F         F +  
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++    M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVLAMAGMYFLEK 220

Query: 391 KIALK 395
           + +  
Sbjct: 221 RASRG 225


>gi|251790535|ref|YP_003005256.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247539156|gb|ACT07777.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 224

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    +I + + V+GIV       + R    K       LY
Sbjct: 1   MYNFDWSSIPPSLPYLIKGMGVTLEITLTAVVVGIVWGTVL-AVMRLSPIKPISWFAKLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--IVPSLLQNVLGLSPKSDIRLVSAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQASAALALGMTHWQSMQLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL   F+Y  +S+  ++ +N L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASMLVNYLKRR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 42/78 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G   T  +  + ++   + GT++   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIPPSLPYLIKGMGVTLEITLTAVVVGIVWGTVLAVMRLSPIKPISWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLIVPSL 82


>gi|152970451|ref|YP_001335560.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150955300|gb|ABR77330.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 308

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           SV   P     +    F +   L     T+       V S + G +L+L     S     
Sbjct: 34  SVAFNPRWEWGVFARWFFDPVILEGLGQTLLLTLLGTVLSVIFGGLLALARLSSSWLLSS 93

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--------E 265
                +       +L   LP +V++ + Y   +    L       G T +         +
Sbjct: 94  LAWGYI-------WLFRSLPLIVVLIILYNFSYLYDTLSLGIPFTGVTWASYQTINVLGQ 146

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   + T  ++LPQA+R+I+P
Sbjct: 147 FSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAWRRTLRIILPQALRTILP 206

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++ ++L K +++   +   +L      I N+T + I ++++    YL+++ +++   
Sbjct: 207 SGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMVGAAWYLAITSVLSAIQ 266

Query: 386 NRLNAKIALKEKK 398
             +   +A  E++
Sbjct: 267 YLVERGLARSERR 279


>gi|66048137|ref|YP_237978.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|302187472|ref|ZP_07264145.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|63258844|gb|AAY39940.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330939295|gb|EGH42690.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330970705|gb|EGH70771.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 231

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F         F +  
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++    M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVLAMAGMYFLEK 220

Query: 391 KIALK 395
           + +  
Sbjct: 221 RASRG 225


>gi|317009597|gb|ADU80177.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           India7]
          Length = 237

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 41  PLAVVSFILGLFIAVMVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|206561693|ref|YP_002232458.1| glutamate/aspartate transport system permease [Burkholderia
           cenocepacia J2315]
 gi|198037735|emb|CAR53679.1| glutamate/aspartate transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 225

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGALPTLWSGAVVTFKITLIAIVVGIVWGTLL-ALLRLSGVKPLAWFAKAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P + Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQVLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWSGAVVTFKITLIAIVVGIVWGTLLALLRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|71734098|ref|YP_274659.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298486963|ref|ZP_07005016.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71554651|gb|AAZ33862.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298158525|gb|EFH99592.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 233

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +          +   + + L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYH-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   +  +  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLAIS 213



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLTESTQLWLANYS 98


>gi|315644843|ref|ZP_07897972.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315279785|gb|EFU43086.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 219

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 16/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---TRLSRHFHEKTGKALPLLYIST 226
             +   L              + + + G++ SL       + R    +  KA+  +Y+  
Sbjct: 3   LWDFNILVEHWDQFMAGLGQTILASLFGLIGSLVLGTLIAILRIAPFRILKAIGAIYVEF 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                L  +V            PV               F S  + L  YTAAFIAE +R
Sbjct: 63  IRNIPLLVVVFFFFLGLPALGVPV-------------DPFTSGTLGLMVYTAAFIAEAIR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP GQ EAA + GL++ +  R ++LPQA++ ++P + +Q +NL+KNSS+   +  
Sbjct: 110 AGIQAVPSGQTEAARSSGLSYVQNMRYIILPQAVKIVLPAIGNQLINLVKNSSVLGVIAG 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            DL+     I   T + I +       YL L++ ++L ++ +  + A  
Sbjct: 170 LDLMYYADLINLSTFKGIPVYTFVALFYLLLTVPLSLAVHYMERRFARS 218



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +    + G   T   +  G+I + ++GTL+   R++  +++  I  +YVE  RNIP LVV
Sbjct: 12  HWDQFMAGLGQTILASLFGLIGSLVLGTLIAILRIAPFRILKAIGAIYVEFIRNIPLLVV 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +FF +  + ++    D       G+ +         +     A
Sbjct: 72  VFFFFLGLPALGVPVDPFTSGTLGLMVYTAAFIAEAIRAGIQA 114


>gi|187927129|ref|YP_001897616.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|309780168|ref|ZP_07674919.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|187724019|gb|ACD25184.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|308920871|gb|EFP66517.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 217

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + +F LG    L     +R     T + +   YI  F     P L+ + + +    
Sbjct: 22  LMLSLMAFALGGTAGLVVL-FARVGRNATLQRVSKAYIQLF--QNTPLLMQMFIVF---- 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           + +  I L+ YT+A++AE+ R  + A+PRGQ EA+ +L + 
Sbjct: 75  -------FGASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASSSLAMG 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + N T Q   I
Sbjct: 128 YFQQMRHVVLPQAVRLSIAPTVGFSVQIVKGTAVASIIGFEDLSKLGSVLANATFQPFLI 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             +    Y +L   ++L+ + L  K+
Sbjct: 188 YGLVAIGYFALCWPLSLYASHLEKKL 213



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 32/97 (32%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L+          G +V   R+  N  +  + + Y+++F+N P L+ +F ++  
Sbjct: 17  GLLATLMLSLMAFALGGTAGLVVLFARVGRNATLQRVSKAYIQLFQNTPLLMQMFIVFFG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                           G+ L               A 
Sbjct: 77  ASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAI 113


>gi|104782883|ref|YP_609381.1| arginine/ornithine transport protein AotQ [Pseudomonas entomophila
           L48]
 gi|95111870|emb|CAK16594.1| arginine/ornithine transport protein AotQ (membrane) [Pseudomonas
           entomophila L48]
          Length = 229

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLVGVAL-RLSPVRWLAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P  ++    L     A+++E  R   + +P+GQ EA  
Sbjct: 71  GGQDLLNRVAPLLGYDDYIDLNP-LVAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEAGA 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++  +    +++PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSGVQVFFRIMVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL L+ +  L +  L  + ++  K
Sbjct: 190 EPFTFFLAVAALYLVLTSVSLLALRYLEKRYSVGVK 225



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLVGVALRLSPVRWLAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     +L      +     + LN 
Sbjct: 65  ILLIFYGGQDLLNRVAPLLGYDDYIDLNP 93


>gi|78065233|ref|YP_368002.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77965978|gb|ABB07358.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia sp. 383]
          Length = 225

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           +I + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGALPTLWTGAVVTFQITLIAIVVGIVWGTLL-ALMRLSGVKPLAWFAQGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ  AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQANAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSLASALVKGLQKKVTR 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAVVTFQITLIAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  +
Sbjct: 76  FLIVPQL 82


>gi|330501278|ref|YP_004378147.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328915564|gb|AEB56395.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 215

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 14/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L      +     + + +FV G +  L    L+R       + L   YI  F  
Sbjct: 3   FTLWDILRNLLTGLQWTLLLSLVAFVCGGIAGLLVL-LARLSPLSAPRILARGYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           +++   AL+ +T+AF+AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGIALLGIDVSPWLAAATALTLFTSAFLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ RGQ EA+ +L ++  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESISRGQWEASESLAMSRLETLRHVVLPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              G  + N T +   +       Y  L   ++L   RL  ++ +
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFLLCYPLSLAAYRLERRLNV 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L G   T  L+    +   I G LV   RLS       + R Y+E+F+  P L
Sbjct: 6   WDILRNLLTGLQWTLLLSLVAFVCGGIAGLLVLLARLSPLSAPRILARGYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHS 162
           + +F ++  +  +       
Sbjct: 66  MQLFLVFFGIALLGIDVSPW 85


>gi|320329011|gb|EFW85010.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330880665|gb|EGH14814.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 220

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 110/234 (47%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R L      +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDLPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++  GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHEGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|317011145|gb|ADU84892.1| amino acid ABC transporter permease [Helicobacter pylori
           SouthAfrica7]
          Length = 237

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+   +L IV++L      + F  +   A    Y+S  +I G P LV I + + 
Sbjct: 41  PLAIISFILGLLLAIVVALIKIAPPKRFIHRALLAGVNFYVS--IIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEIFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|262403071|ref|ZP_06079631.1| ABC-type amino acid transport system permease component [Vibrio sp.
           RC586]
 gi|262350570|gb|EEY99703.1| ABC-type amino acid transport system permease component [Vibrio sp.
           RC586]
          Length = 265

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 34  MGYTWQWHRVPEYVLIFEDGQWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 89  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 254

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 255 EHKLGAQWR 263



 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 11/128 (8%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
             +    +  +L+    +W +++    M       G  +   R    + + ++ +     
Sbjct: 7   RPLLFATLQMILVFAGLVWLLDSGAQAM-------GYTWQWHR----VPEYVLIFEDGQW 55

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV 
Sbjct: 56  WAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQ 115

Query: 145 IFFLYKSV 152
           I+ LY   
Sbjct: 116 IYLLYFVF 123


>gi|206563319|ref|YP_002234082.1| ABC transporter permease [Burkholderia cenocepacia J2315]
 gi|198039359|emb|CAR55324.1| ABC transporter, permease protein [Burkholderia cenocepacia J2315]
          Length = 218

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     +      L    +T++  A  FV S VLG++L+L           K  +   + 
Sbjct: 1   MFFQNAIDFLPILLKGAVVTIEITACAFVLSSVLGLILALL----------KVSRNRAVS 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              + ++  +  L +I   + ++F  P L              F +  + L    +A+ A
Sbjct: 51  TAGSTIVNVIRGLPIIVQLFYMYFVLPDL--------GVQLSAFQAGVLGLGIAYSAYQA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ A+ RGQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A 
Sbjct: 103 ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  A++   G  I + T Q + +  +   +YL+L + +   +NRL  ++AL+ 
Sbjct: 163 TITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRR 216


>gi|56697501|ref|YP_167869.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679238|gb|AAV95904.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 238

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 3/233 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    +G+      L +    +     + + ++VL + + +    + R    +    L  
Sbjct: 2   NYNWNWGVLFEEEYLGWLISGVGWTFSVALVAWVLALAVGILVG-VGRTLPSRPVALLCT 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F    +P LV + L Y +  +        ++     +PE+++  + L  YTA+ +
Sbjct: 61  TYVEIF--RNVPLLVQLFLWYFVLPEIVPSDMGRWMKRDMPNPEYVTAVVGLGLYTASRV 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VR+G+ AV  G   AA A GL+  +  R VLLP + R I+PP+TS++L + KNSSLA
Sbjct: 119 AEQVRAGINAVGGGLTSAAYANGLSTAQTYRYVLLPISFRLIVPPMTSEFLTIFKNSSLA 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +G  +L +    I   T Q  E       IY+ +++   +    L     +
Sbjct: 179 LTIGLLELTAQSQQIAEYTFQGFEAFTAATVIYVVIALCATVIAQILERHTKI 231



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 42/76 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y   ++ G   TF +A    + A  +G LVG GR   ++ VA +C  YVE+FRN+P 
Sbjct: 12  EEEYLGWLISGVGWTFSVALVAWVLALAVGILVGVGRTLPSRPVALLCTTYVEIFRNVPL 71

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  +  ++P
Sbjct: 72  LVQLFLWYFVLPEIVP 87


>gi|317970284|ref|ZP_07971674.1| polar amino acid ABC transporter, inner membrane subunit
           [Synechococcus sp. CB0205]
          Length = 318

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 76/272 (27%), Positives = 137/272 (50%), Gaps = 17/272 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++ + +    +   I    +            L+    T+       + + ++G  + +
Sbjct: 47  LLLTWRWIGNPAGFDIAGSWLPFSADQPYWWALLAGLVNTLRVVVIGLIGASIVGTAVGV 106

Query: 203 FAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLV-----------LIALKYQLH 245
            +       R     + +  + +PLL    F  F +   +           ++  +  L+
Sbjct: 107 ASFSGNALLRGLARVYVELIRNIPLLLQLVFWYFVVFLSLPGGAQAIQWPGVVLAQSGLY 166

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P L    +     +S EF +L   L  Y +AFI+E+VR G+ +VP+GQ EAA ALG 
Sbjct: 167 LGMPELVNGVWQAPIRLSVEFAALLTGLIVYISAFISEVVRGGIASVPKGQWEAARALGF 226

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +  R V+LPQA+  I+P L +QY++L K+SSLA+A G+ADL SV  T +NQTG+A+E
Sbjct: 227 SPLQTLRRVVLPQALPVIVPGLNNQYISLAKSSSLAIACGYADLYSVAETTLNQTGRAVE 286

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +++I +  YL++ ++I+  MN LN  + L+ +
Sbjct: 287 VMVILLGAYLAMDLVISALMNALNRAVQLRSR 318



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 6/196 (3%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
             +  + R+    +Q  + LL+ V+  + + N+  N+  + L L   ++   AGF+I   
Sbjct: 6   TPWWRNRRLIPWLLQAAVGLLVLVLVAFLLGNLVQNLAAAGLLLTWRWIGNPAGFDIAGS 65

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            +P+++D  Y  A+L G VNT  +   G+I A+I+GT VG    S N L+  + RVYVE+
Sbjct: 66  WLPFSADQPYWWALLAGLVNTLRVVVIGLIGASIVGTAVGVASFSGNALLRGLARVYVEL 125

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF------GMFLNNRGLSFPTLTMDTNAKI 189
            RNIP L+ + F Y  V   LP    +I  P       G++L    L            +
Sbjct: 126 IRNIPLLLQLVFWYFVVFLSLPGGAQAIQWPGVVLAQSGLYLGMPELVNGVWQAPIRLSV 185

Query: 190 FVFSFVLGIVLSLFAT 205
              + + G+++ + A 
Sbjct: 186 EFAALLTGLIVYISAF 201


>gi|297160232|gb|ADI09944.1| amino acid ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 250

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 13/222 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             +     +    +    ++ ++S +L   ++ F   ++R+      + L   Y+  F  
Sbjct: 1   MTSGLWEKWLLPGVWITIQLTLYSALLAAAIA-FGVGIARNSRLWIVRFLTGCYVEIF-- 57

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G   LVL+   + L F  P+  QF  +          +  +AL     A+ +EIVR  +
Sbjct: 58  RGTSALVLM---FWLFFVMPLGFQFQLL-------PMWAAVLALGLTYGAYGSEIVRGAI 107

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV   Q EAAIAL  T  +  R V+LPQA+  +IPP  +  + LLK ++L  AV  AD+
Sbjct: 108 GAVAPAQREAAIALSFTPAQRMRRVILPQAIPEMIPPFNNLLIELLKATALVSAVSVADI 167

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                     TG ++EI  I + +Y  L+ ++   M  L  +
Sbjct: 168 TFAAQLSRLATGDSLEIYSIILVLYFVLAFVLTRLMRLLERR 209



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L     + A  I   VG  R S   +V ++   YVE+FR    LV+
Sbjct: 6   WEKWLLPGVWITIQLTLYSALLAAAIAFGVGIARNSRLWIVRFLTGCYVEIFRGTSALVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +F+L+  +          + 
Sbjct: 66  MFWLFFVMPLGFQFQLLPMW 85


>gi|51891627|ref|YP_074318.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855316|dbj|BAD39474.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 229

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 13/184 (7%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            ++G+A+  LY+S  LI   P +  +   Y L      L  F+      + P      + 
Sbjct: 52  WRSGRAVSRLYVS--LIQNTPLVTQVFFLYYL------LPHFD-----IMLPTPAVGVLG 98

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  Y  A++ E+VR+G+ A+ RGQ+EAA++ G T+ +A R ++LPQA + ++PP+T+Q +
Sbjct: 99  LGVYHGAYMTEVVRAGIQAIHRGQLEAALSQGFTYVQAMRHIILPQATQIVLPPMTNQAV 158

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+KNSS+   +   DL+    +    TG      L    IY ++   +A    R   ++
Sbjct: 159 ALIKNSSILAMISGGDLMFQADSWSASTGYYGPAYLTVWAIYFAICFPLAQLARRWEERV 218

Query: 393 ALKE 396
            L  
Sbjct: 219 RLSR 222


>gi|119387802|ref|YP_918836.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378377|gb|ABL73140.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 218

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 14/224 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            ++  L F    +     +   +F LG  L   A  L+R    +  + +   +I  F   
Sbjct: 5   FSSADLMFIVSAVRWTLILSAIAF-LGGALGGLAVALARTAQGRLRRRIAAGFIQVF--Q 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + L Y           F            ++  +AL+ + +A++ EI R  + 
Sbjct: 62  GTPLLMQLFLVY-----------FGLAVVGLPIDPLLAAAVALTLHASAYLGEIWRGAIE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ EAA AL L+++   R V+LPQAMR    P     + L+K +SLA  +GF +L 
Sbjct: 111 AVPPGQTEAATALSLSYKDRMRHVVLPQAMRLATAPTVGFLVQLIKGTSLASIIGFTELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             G  I N T +   +      +Y  L   ++L   R+ A++ L
Sbjct: 171 RAGQIINNATFKPFLVFGTVAALYFVLCWPLSLLARRMEARMRL 214


>gi|330988311|gb|EGH86414.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 365

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGIAFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|269795725|ref|YP_003315180.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
 gi|269097910|gb|ACZ22346.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
          Length = 285

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 21/216 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  F     LGIVL+L      +       + L   YI  F       LV+IA  Y +  
Sbjct: 85  AAAFAVGLSLGIVLALM-----KLSSVGVYRWLATAYIEFFRGIPA-LLVVIAFAYAVPI 138

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G ++    +   +AL   +AA+IAE +R+G+ AVP GQ+EAA +LG++
Sbjct: 139 AL----------GVSIPSLTLKAALALGMVSAAYIAETLRAGIEAVPPGQIEAARSLGMS 188

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF----ADLVSVGGTI-INQTG 361
           H +    V++PQA R ++PP+T++ + L K++SL   +G      DL  +G     + +G
Sbjct: 189 HSRTLVTVVIPQAFRIVLPPMTNEIILLTKDTSLIYLMGLLPTQFDLTKIGRDALSSGSG 248

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +  + +    YL ++I + L    L  +     +
Sbjct: 249 GGLTGLFVAGLGYLCITIPLGLLARWLEKRTGKGSR 284



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           F+NT     +       +G ++   +LS+  +  W+   Y+E FR IP L+V+     +V
Sbjct: 77  FLNTLTYTAAAFAVGLSLGIVLALMKLSSVGVYRWLATAYIEFFRGIPALLVVIAFAYAV 136

Query: 153 L 153
            
Sbjct: 137 P 137


>gi|126459641|ref|YP_001055919.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum calidifontis JCM 11548]
 gi|126249362|gb|ABO08453.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum calidifontis JCM 11548]
          Length = 232

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 12/225 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L + ++ + T   +   +F +GIVL      L+R F  K    +   Y+  F   G
Sbjct: 9   YIDALLYVSMGIPTTMSLAALAFSIGIVLGSLLL-LTRFFLPKPLPWIATAYVEAF--RG 65

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I + Y            N          F +  IAL   +AA+ AEI R+ + A
Sbjct: 66  TPLLVQIFIIYFGVGGYLKAYGINL-------DPFTAGVIALGLNSAAYQAEIFRAAVQA 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF--ADL 349
           +P  Q   A A   T  +  R ++LPQA+R  +P L ++ + L+K+SSL   +G    D+
Sbjct: 119 IPVEQYLTAEAYAFTKAQTFRYIILPQALRIALPALMNELVLLIKDSSLVAVIGVFPPDV 178

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                          E  +    +Y  L   +    + +  + A+
Sbjct: 179 FRRADYFSASRFMYFEAYMAAATVYFILCYTMVKISHWIERRYAI 223



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 83  SSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
             Y  A+L   +G   T  LA        ++G+L+   R    K + WI   YVE FR  
Sbjct: 7   QDYIDALLYVSMGIPTTMSLAALAFSIGIVLGSLLLLTRFFLPKPLPWIATAYVEAFRGT 66

Query: 140 PPLVVIFFLYKSV 152
           P LV IF +Y  V
Sbjct: 67  PLLVQIFIIYFGV 79


>gi|86148622|ref|ZP_01066904.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. MED222]
 gi|218709392|ref|YP_002417013.1| ABC transporter transmembrane protein [Vibrio splendidus LGP32]
 gi|85833578|gb|EAQ51754.1| ABC-type amino acid transport system, permease component [Vibrio
           sp. MED222]
 gi|218322411|emb|CAV18564.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
          Length = 365

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 121/266 (45%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  L       ++ + +  +  +  ++   ++    GL            + +   ++GI
Sbjct: 110 VALLAYEKTPKRTWIWLFFVNIYPFIIAGLLYGGVFGLEVVDTHKWGGLLVTLIIALVGI 169

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V+SL    A  L R       +++  +YI  +    L T++ +A           +    
Sbjct: 170 VVSLPIGVALALGRRSEMPIIRSMCTVYIEIWRGVPLITVLFMA----------SVMLPL 219

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+     + + +   + +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K T L++
Sbjct: 220 FLSEGMETDKLIRALVGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKTGLII 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G          G + E  +    
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGYSTESYVFVAL 339

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  ++    K+
Sbjct: 340 VFWVFCFGMSRYSIWLENRLHTGHKR 365



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 33/64 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG  +  GR S   ++  +C VY+E++R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVALALGRRSEMPIIRSMCTVYIEIWRGVPLITVLFMASVM 216

Query: 152 VLSV 155
           +   
Sbjct: 217 LPLF 220


>gi|331014304|gb|EGH94360.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 220

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 108/234 (46%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L     +     +  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPNLLAGLGLGLELALISIAIGCVIGLM-NAFALLSRYRALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFVVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  + +++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLHNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|330965315|gb|EGH65575.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 220

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L     +     +  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPNLLAGLGLGLELALISIAIGCVIGLM-NAFALLSRYRALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFVVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVILRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|146309285|ref|YP_001189750.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145577486|gb|ABP87018.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 231

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + ++ G+P L+ + L Y                 S     F +  
Sbjct: 41  KTSPYKPLQWLGGSYSTIVRGVPELLWVLLIYFGTVGLMRSLADLLGVASLELSAFAAGT 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGMALGMSKGRILWKLILPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  + +     ++  FIYL L+I+  + ++ L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRRSQIAVTASKEPFTFYMVAAFIYLGLTILAMIGLHFLEK 220

Query: 391 KIALK 395
           + +  
Sbjct: 221 RASRG 225


>gi|312111275|ref|YP_003989591.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|311216376|gb|ADP74980.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 216

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   ++  +  L L+ + +  +F  P +             +F +  +AL  + +A ++E
Sbjct: 54  IFAVIVETIRNLPLLLIIFFTYFALPEV--------GLKLDKFYAAIVALVVFESAMLSE 105

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR GL ++ +GQ+EAA + GLT+ +    ++LPQA+R ++PP+ SQ+++LLK++SLA+ 
Sbjct: 106 IVRGGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIV 165

Query: 344 VGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +L++    I  +     I I ++   +Y  ++  ++L   RL  K
Sbjct: 166 IALPELMNHAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYK 214



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 42/74 (56%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++ T +L GF+ T  +AF  +I + I G ++G  R +    ++ I  V VE  RN+P 
Sbjct: 8   SPAHLTFLLQGFLVTLEVAFISIIFSFIFGIIIGVIRYTKIPGISQIFAVIVETIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++  V
Sbjct: 68  LLIIFFTYFALPEV 81


>gi|222480219|ref|YP_002566456.1| polar amino acid ABC transporter, inner membrane subunit
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222453121|gb|ACM57386.1| polar amino acid ABC transporter, inner membrane subunit
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 308

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 21/289 (7%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           A   G LV       + +  W+  V V + +   PLV    +  ++ S+  I  ++    
Sbjct: 31  ALFWGWLV------VSWVNRWLGGVIVPIGQ---PLVPPGAVETALGSIPGIAAYAADAA 81

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +         LT+   A   V  F + + L++         + +    L L Y   
Sbjct: 82  FVVEMTPALSRGTWLTVVITAMSLVLGFFIAVPLAV------TRVYGRFSAWLSLAYTE- 134

Query: 227 FLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            L+ G P L  +  L Y L+    V      + G           +  +   AA+ AE +
Sbjct: 135 -LLRGTPLLAQLFVLYYGLNLASYVP---GSVSGVFARDVVWVAILGFTLNGAAYQAEYI 190

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L +V  GQ+ A  A+GL+  +    V+LPQ +R  IP  T++++ L+K SSLA  + 
Sbjct: 191 RGALESVEEGQITAGRAIGLSKVETIYYVVLPQGLRYAIPSWTNEFVYLIKYSSLAAFIT 250

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +L      I ++T +   I ++    YL+L +  +  M R+  ++A+
Sbjct: 251 VPELYYRADQIASETFRYTLIFVVTGLTYLALVLTASKLMERVEERVAI 299


>gi|227818837|ref|YP_002822808.1| ABC-type amino acid transport system, permease component
           [Sinorhizobium fredii NGR234]
 gi|36959095|gb|AAQ87520.1| Transporter [Sinorhizobium fredii NGR234]
 gi|227337836|gb|ACP22055.1| putative ABC-type amino acid transport system, permease component
           [Sinorhizobium fredii NGR234]
          Length = 216

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 13/192 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R   +K  + +   YI  F   G P L+ + + Y                       
Sbjct: 38  ALLRTSKKKVARTITAGYIGVF--QGTPLLMQLFVVYY-----------GVALLGIEVNA 84

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++++ IA + + +AF+ EI R  + AVP+GQ EAA ALGL +    + ++LPQA++  +P
Sbjct: 85  WIAVAIAFTLHASAFLGEIWRGSIEAVPKGQTEAANALGLHYVSRMKDIILPQALKISMP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                 + L+K +SLA  VGF +L   G  I NQT + + +  I   IY  +   ++   
Sbjct: 145 ATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQTYRPLLVFGIVGAIYFIICWPLSHAG 204

Query: 386 NRLNAKIALKEK 397
           + L  ++A   +
Sbjct: 205 SGLEKRMAKAAR 216



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 37/99 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  LA  G I   I G L+   R S  K+   I   Y+ VF+  P L+ +F +
Sbjct: 12  LMQGLKWTVLLAIVGFIGGGIFGILIALLRTSKKKVARTITAGYIGVFQGTPLLMQLFVV 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  V  +    +  I +     L+              A
Sbjct: 72  YYGVALLGIEVNAWIAVAIAFTLHASAFLGEIWRGSIEA 110


>gi|255029025|ref|ZP_05300976.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes LO28]
          Length = 149

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/132 (31%), Positives = 82/132 (62%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F+S  IALS  +AA++AEI+R+G+ AV +GQMEAA +LG+T   + R ++LPQA+++I+
Sbjct: 18  AFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASMRYIILPQAVKNIL 77

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L ++++ ++K SS+   +G  +L+ + G +   + +    ++I   IY  L+  ++  
Sbjct: 78  PALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLIITSLIYFVLTFSLSRL 137

Query: 385 MNRLNAKIALKE 396
           +     ++   +
Sbjct: 138 LGVAERRMRTSD 149


>gi|24379640|ref|NP_721595.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|24377593|gb|AAN58901.1|AE014958_5 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
          Length = 217

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LSF    +     I V SF+ G +L +F + L R       ++L  +YIS  ++ G+P L
Sbjct: 12  LSFVLTGIPYTLGISVLSFLTGCLLGIFISFL-RMSQNSWLRSLARIYIS--IMRGVPML 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ + Y           F         P  +  YI  S  ++A+I+EI R+ + AV +G
Sbjct: 69  VVLFVLY-----------FGLPYFEVQLPALLCAYIGFSAVSSAYISEIFRASISAVDKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALGL      + ++LPQA R  I PL +  L++LK+SSLA  +   D+      
Sbjct: 118 QWEAAGALGLPMTSILKSIILPQAFRIAIAPLGNVMLDMLKSSSLAAMITVPDIFQNAKI 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I  +    + + ++  FIY  L  +  +F N L AK+++ 
Sbjct: 178 IGGREYDYMSMYILIAFIYWLLCFLFEMFQNHLEAKLSVY 217



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  ++    +   ++G  +   R+S N  +  + R+Y+ + R +P LVV+F LY
Sbjct: 16  LTGIPYTLGISVLSFLTGCLLGIFISFLRMSQNSWLRSLARIYISIMRGVPMLVVLFVLY 75

Query: 150 KSVLSVLPI 158
             +      
Sbjct: 76  FGLPYFEVQ 84


>gi|50121971|ref|YP_051138.1| histidine ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612497|emb|CAG75947.1| histidine ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 238

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   L+   +T+       V   ++ + L++      R F          
Sbjct: 6   QQYWQPLLWSDGYRLTGLAMTLWLLISSVVIGGLMALPLAIARVSPRRRFSLPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++ T++  G P  V + + Y   +   ++   + +  +          +AL+  T A+ 
Sbjct: 60  -WLFTYVFRGTPLYVQLLVFYSGVYSLEIVRGTDLL-NAFFRSGLNCAILALALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA
Sbjct: 118 TEIFAGAIRSVPHGEIEAARAYGFSRFKQYRCIILPSALRIALPAYSNEVILMLHSTALA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   D++ +   I   T Q      I   IYL++S ++     +    
Sbjct: 178 FTVTVPDILKIARDINAATYQPFYAFGIAAVIYLAISFVLIGMFRKAERH 227


>gi|300689743|ref|YP_003750738.1| amino-acid ABC transporter [Ralstonia solanacearum PSI07]
 gi|299076803|emb|CBJ49413.1| putative amino-acid ABC transporter [Ralstonia solanacearum PSI07]
          Length = 223

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 14/226 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +      L           ++ V SF+L  V+ L    L R    K   A     ++  
Sbjct: 6   FLEHAREFLPILLQGAVVTVEVTVLSFLLSSVIGLAL-ALMRLSPVKAVSAAGATIVN-- 62

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP +V +   Y           F           F +  I L    +A+ AE  R+
Sbjct: 63  IIRGLPIIVQLFYIY-----------FVLPDIGIQLSAFQAGVIGLGIAYSAYQAENFRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV  GQ EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A
Sbjct: 112 GIEAVDPGQREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVA 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++   G  I + T Q + +  +   +YL +S+ +   + RL   + 
Sbjct: 172 EMTRAGQLIASSTFQNMTVYTLVALLYLLMSLPLVFGLRRLERHLG 217



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +     + +++IG  +   RLS  K V+      V + R +P +V +F++
Sbjct: 17  LLQGAVVTVEVTVLSFLLSSVIGLALALMRLSPVKAVSAAGATIVNIIRGLPIIVQLFYI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +            G+ +               A
Sbjct: 77  YFVLPDIGIQLSAFQAGVIGLGIAYSAYQAENFRAGIEA 115


>gi|156933100|ref|YP_001437016.1| hypothetical protein ESA_00910 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531354|gb|ABU76180.1| hypothetical protein ESA_00910 [Cronobacter sakazakii ATCC BAA-894]
          Length = 238

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL++F   + R    K       +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLIASVVMGGVLAVFL-AIGRVSENKLVWF--PIWLFTYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   V+     +             +AL+  T A+  EI    + AVP
Sbjct: 71  LYVQLLVFYSGMYTLEVVKGTPLL-NEFFRSGLNCTVLALTLNTCAYTTEIFAGAIRAVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|77408363|ref|ZP_00785104.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77173044|gb|EAO76172.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 231

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 10/179 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K GK +  +Y+  F     P LV +   Y         G      G  +   F +  
Sbjct: 55  SKSKVGKLISRIYVEVF--QNTPLLVQMVFVYY--------GLAIISNGHIMISAFFTAV 104

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+PP+T+Q
Sbjct: 105 LCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAIRTILPPMTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +NL+KN+S    +  AD++ +       T   I         Y  +   +A +  +  
Sbjct: 165 VVNLIKNTSTVAIISGADIMFLAKAWAYDTTNYIPAFAGAAIFYFVICFPLASWARKQE 223



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++      GF+ T  ++F  ++ A I+G L G    S +K+   I R+YVEVF+N P LV
Sbjct: 19  NHFDLFFKGFLYTLGISFGALLLALILGILSGGLSTSKSKVGKLISRIYVEVFQNTPLLV 78

Query: 144 VIFFLYKSV 152
            + F+Y  +
Sbjct: 79  QMVFVYYGL 87


>gi|330446186|ref|ZP_08309838.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490377|dbj|GAA04335.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 220

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 7/212 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   S V+G+VL++           +  +   + + +T L+  L  L  + +   +
Sbjct: 1   MTVQLAFTSLVVGLVLAMLFA------GGEMSRFRLVAWPTTALVTVLRGLPELLIVLFI 54

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F    +  F   G       F+S  IALS   A++ A+ +R  + AVP+GQ EAA ALG
Sbjct: 55  FFGSGQI-LFYITGDYVEISPFLSGVIALSLIFASYAAQTIRGAIRAVPKGQREAASALG 113

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    +++PQA+R  +P LT+Q+L LLK+++L   +G  DL+         T ++ 
Sbjct: 114 ISKSRTFFAIIVPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHESF 173

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                   +YL ++++    +  ++AK + ++
Sbjct: 174 TWYATAAGVYLVITLITQKIIKIIDAKYSAQD 205


>gi|253688087|ref|YP_003017277.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754665|gb|ACT12741.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 238

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 10/224 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPT 234
               + V + VLG+VL++          +             + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALVLGLVLAMLFAVWETVRWKAVSWTGTAVVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+++           V        G      F+   IAL+   AA+ ++ +R  L AVP+
Sbjct: 73  LLMMLADGFTLNLFIVQIPVKLDIGMFEISPFLCGVIALALLYAAYASQTLRGALKAVPQ 132

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    
Sbjct: 133 GQWESGQALGLSKSAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTK 192

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  +T +     ++   IYL ++++    + R+  +    E++
Sbjct: 193 SIATRTQEPFTWYVVAAAIYLIITLLSQYVLKRIELRTTRFERR 236


>gi|167470083|ref|ZP_02334787.1| arginine ABC transporter, permease protein ArtQ [Yersinia pestis
           FV-1]
          Length = 217

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 8/215 (3%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKT------GKALPLLYISTFLIFGLPTLVLIAL-KY 242
                VL ++ ++  +   +     T       + LP + +  F+ FG   L+++    +
Sbjct: 1   MALGLVLAMLFAVGESSRLKVVSYLTIGWVTLLRGLPEILVVLFIYFGSSQLLMMLSDGF 60

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L+     L     +    VSP F+   IAL+   +A+ ++ +R  L AVP GQ E+  A
Sbjct: 61  TLNLYLFELPIKLNLDNFEVSP-FLCGVIALALLYSAYASQTLRGALKAVPIGQWESGQA 119

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I  +T +
Sbjct: 120 LGLSQTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQE 179

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +I   IYL ++++    +  +  +    E+
Sbjct: 180 PFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 214


>gi|269103818|ref|ZP_06156515.1| putative amino acid ABC transporter permease protein
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163716|gb|EEZ42212.1| putative amino acid ABC transporter permease protein
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 223

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +      L      + T   + ++  +  + L+L    L R        +L LLYI
Sbjct: 1   MGFDVSYMVSLLPILAKYLTTTLSMALWGMIFALFLALVI-ALIRIKRIWGLNSLSLLYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV + L Y   +  P +     I        + +  I LS + AA++AE 
Sbjct: 60  SFF--RGTPLLVQLFLFY---YGLPQV-----IPAFVGLDGYSAAVIGLSLHFAAYMAET 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++ +   Q EA++A+G++ ++A R ++LPQAMR  +P L + +++++K++SLA A+
Sbjct: 110 IRGAILGIDNSQYEASLAIGMSEQQAMRRIILPQAMRIALPSLMNYFIDMIKSTSLAFAL 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  ++++      + + +  E  L    IY  + I++         ++
Sbjct: 170 GVPEIMAKAQMEASSSFRFFEAFLAVALIYWLIVIVLTRLQTLAETRL 217



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +A  GMI A  +  ++   R+     +  +  +Y+  FR  P LV +F  Y  +
Sbjct: 19  LTTTLSMALWGMIFALFLALVIALIRIKRIWGLNSLSLLYISFFRGTPLLVQLFLFYYGL 78

Query: 153 LSVLP 157
             V+P
Sbjct: 79  PQVIP 83


>gi|237800639|ref|ZP_04589100.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331023498|gb|EGI03555.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 220

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 108/234 (46%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L     +     +  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGLM-NAFALLSRYRALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    + +P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYITVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRALEQRLAIRR 220


>gi|317486432|ref|ZP_07945259.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316922342|gb|EFV43601.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 312

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 102/248 (41%), Gaps = 9/248 (3%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATR 206
            S   + D  +    G +     +    +T+         + ++G VL            
Sbjct: 60  WSWPELADFLVRRTPGGYEPGLLIRGLIVTLRLGVWSMALALLIGGVLGALSAGQRGVAA 119

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L       + + +P L +   L F    L+ ++   Q     P   +     G     + 
Sbjct: 120 LPIQLFVNSVRNIPPLVLLFLLYFFAGNLLPVSDMEQALRSMPPFVRDAVAWGFAPEGQL 179

Query: 267 ---MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              ++  + L  Y  A++ EIVR G+  VP GQ EA+ ALG +  +  RLV+ PQA+R+I
Sbjct: 180 DRMVAAVLTLGVYEGAYVTEIVRGGIEGVPHGQWEASAALGFSRPQQLRLVIFPQAVRAI 239

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL  Q +   K+S+LA  +   DL      ++  +    E+ +    IYL L ++ A 
Sbjct: 240 LPPLVGQVITTFKDSALASLISLPDLTFQALEVMAISRMTFEVWISAGAIYLLLGVLCAR 299

Query: 384 FMNRLNAK 391
           +   L  +
Sbjct: 300 YGRWLETR 307


>gi|257483718|ref|ZP_05637759.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289627332|ref|ZP_06460286.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289650581|ref|ZP_06481924.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330870382|gb|EGH05091.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330987163|gb|EGH85266.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331012129|gb|EGH92185.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 231

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F         F +  
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++    M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVLAMAGMYFLEK 220

Query: 391 KIALK 395
           + +  
Sbjct: 221 RASRG 225


>gi|330718493|ref|ZP_08313093.1| ABC-type amino acid transport system, permease component
           [Leuconostoc fallax KCTC 3537]
          Length = 211

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 11/204 (5%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            + + ++ +V S+    L         KAL +   +   IF    L++I + + +     
Sbjct: 19  TLLASLIALVGSMILGTLFAILEILPNKALSIFGHTYVEIFRNIPLLVITMFFYI----- 73

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                  I  +     F S  + L+ YT+AFIAE VR+G+ ++  GQME A A GL++ +
Sbjct: 74  ------VISNAIKISGFWSGTLGLTLYTSAFIAETVRAGIQSIDSGQMEGARANGLSYGQ 127

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A   ++LPQA    +P L +Q++NL+KNSS+   V   D++     I           ++
Sbjct: 128 AMSRIILPQAFVVALPSLANQFINLVKNSSILAFVAGFDIMYQANVIAGLNFDPFNTYIV 187

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              +YL +++ ++ +M  L  K A
Sbjct: 188 AGILYLIITLPLSYYMQHLEKKSA 211



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 37/77 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            +  L GF  T   +   ++ + I+GTL     +  NK ++     YVE+FRNIP LV+ 
Sbjct: 9   LSTFLSGFGYTLLASLIALVGSMILGTLFAILEILPNKALSIFGHTYVEIFRNIPLLVIT 68

Query: 146 FFLYKSVLSVLPIPDHS 162
            F Y  + + + I    
Sbjct: 69  MFFYIVISNAIKISGFW 85


>gi|330446207|ref|ZP_08309859.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490398|dbj|GAA04356.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 365

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  L      Y+  + +  +  +  +  F ++     L      +     I +   ++GI
Sbjct: 110 IGLLAYEKTPYRGWIWLFFVNIYPFIAGFLLYGGVFDLPVVETHLWGGLLITLIIAIVGI 169

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V+SL       L R       +++  +YI  +    L T++ +A           +    
Sbjct: 170 VVSLPIGVVLALGRRSEMPIIRSICTVYIELWRGVPLITVLFMA----------SVMLPL 219

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+     + + +   + +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 220 FLSSEMETNKLIRALMGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIV 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAATTDPEWLGFATESYVFVAL 339

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  K+    K+
Sbjct: 340 VFWIFCFGMSRYSIYLENKLHTGHKR 365


>gi|224368641|ref|YP_002603090.1| ABC-type amino acid transporter, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223691357|gb|ACN14640.1| ABC-type amino acid transporter, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 226

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 14/235 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +++  F   +    L      +     I   S  L +V+ + A    R    K  K   +
Sbjct: 4   NMLADFNFRIIMEYLPLFLHGLGATFLISTASIFLALVVGVIACA-CRISQIKYLKYPAI 62

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YI   LI   P LV I   Y  +F  P L            PE  +  +AL   + A+I
Sbjct: 63  AYIE--LIRSTPLLVQI---YFFYFGLPTL--------GVRIPEIQTGILALMLNSGAYI 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R+G+ +V  G +EA I+ GL + +  R ++LPQA+ + IPPL  Q + L+K+S+L 
Sbjct: 110 AEIIRAGISSVDEGHIEAGISSGLNYVQRMRFIILPQALGATIPPLLGQAIVLVKDSALL 169

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +  A+L   G  + ++     E  L   F Y+ +  ++    +    K+  +E
Sbjct: 170 SLISVAELTRCGQVLTSERFMPTEAFLTVAFFYMCIYFVLKSLADWSQKKLIFRE 224



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G   TF ++ + +  A ++G +  A R+S  K + +    Y+E+ R+ P LV 
Sbjct: 17  YLPLFLHGLGATFLISTASIFLALVVGVIACACRISQIKYLKYPAIAYIELIRSTPLLVQ 76

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           I+F Y  + ++             + LN
Sbjct: 77  IYFFYFGLPTLGVRIPEIQTGILALMLN 104


>gi|149191356|ref|ZP_01869609.1| ABC-type amino acid transport system, permease component [Vibrio
           shilonii AK1]
 gi|148834835|gb|EDL51819.1| ABC-type amino acid transport system, permease component [Vibrio
           shilonii AK1]
          Length = 365

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 114/263 (43%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       + S  +G+
Sbjct: 118 TPKRLWIWLFFVNIYPFIAAGLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F  
Sbjct: 178 ALAL-----GRRSEMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFFS 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
               + + +   I +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++LPQ
Sbjct: 223 EGVETDKLIRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMGLIVLPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365


>gi|146313343|ref|YP_001178417.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145320219|gb|ABP62366.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Enterobacter sp. 638]
          Length = 367

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A++VG ++         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHEQRWRINVALIVGLLS---------IAPMFWKHLPRRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  + PLVV   LY  VL +  +                     T
Sbjct: 125 -----------YIACWAVVYPLVVWLLLYGGVLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPLGILLAL-----GRRSTMPVVRVLSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 361 ---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 VWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|134296591|ref|YP_001120326.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134139748|gb|ABO55491.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 229

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 80/175 (45%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T LI G+P LVL+ L +        +              F++  + L     A+  E
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQIDIDPFLAGVLVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   
Sbjct: 112 TFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     LI   +YL+++ M    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAITTMSNFVLMWLEKRYSTGVRK 226


>gi|315586883|gb|ADU41264.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Helicobacter pylori 35A]
 gi|317178711|dbj|BAJ56499.1| amino acid ABC transporter permease [Helicobacter pylori F30]
          Length = 240

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K        Y+S  LI G P LV I + + 
Sbjct: 44  PLAFISFILGLFIAVLVALIKIAPPKHFIHKALLTGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPTL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|311112079|ref|YP_003983301.1| amino acid ABC transporter permease [Rothia dentocariosa ATCC
           17931]
 gi|310943573|gb|ADP39867.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Rothia dentocariosa ATCC 17931]
          Length = 267

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 20/215 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  F     LG++L+L      R       + L  +Y+  F       LV  A  Y +  
Sbjct: 69  ALGFAVGLSLGLILALM-----RISSIAPYRWLATIYVEIFRGIPA-LLVFFAFGYGIPL 122

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +    N I           + ++L   ++A+I+E++R+GL AVP+GQ EAA +LG++
Sbjct: 123 AFKIRFVDNLIP----------VTLSLGLVSSAYISEVLRAGLQAVPKGQYEAARSLGMS 172

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   V++PQA R ++PPLT++ + L K+SSL   +G      +L   G   I  +G 
Sbjct: 173 HTRAMLSVIIPQAFRIVLPPLTNEVILLTKDSSLVYLLGVQIAQYELAKFGREGITASGA 232

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +++    YL +++ +         +     K
Sbjct: 233 GLTPLVVAGLCYLIITVPLGQLSAYFEKRTGASRK 267



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I V   NT      G      +G ++   R+S+     W+  +YVE+FR IP L+V F 
Sbjct: 56  VITVALKNTLIYTALGFAVGLSLGLILALMRISSIAPYRWLATIYVEIFRGIPALLVFFA 115

Query: 148 LYKSVLSVLPIPDHSIVLPFGM 169
               +     I     ++P  +
Sbjct: 116 FGYGIPLAFKIRFVDNLIPVTL 137


>gi|296111776|ref|YP_003622158.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295833308|gb|ADG41189.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 213

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 19/230 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T+       + S  LGI++SL            T + L   YI
Sbjct: 1   MNYFLEIAPNLLAGLKMTLGVFFLTIIGSVPLGIIVSLGM-----KSEYFTVRWLINGYI 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y                     P F +  IA     AA++AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYY-----------GLGMMGITFPRFEAAVIAFIINYAAYLAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL +VPRGQ +AA  LG T  +    ++LPQ ++ ++P   ++ +NL+K++SL   +
Sbjct: 103 FRGGLQSVPRGQYDAARVLGFTRTQTFFKIVLPQVIKIVVPSFGNEVINLVKDTSLVYVI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D++  G    ++    +   L+   IYL ++ ++ + + R   ++ +
Sbjct: 163 GLGDILRAGNIAASRD-VTLVPYLLVGLIYLLMTAIVTVLLRRSEKRLNI 211



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  +I +  +G +V  G  S    V W+   Y+ + R  P L+ + F+
Sbjct: 11  LLAGLKMTLGVFFLTIIGSVPLGIIVSLGMKSEYFTVRWLINGYIWIMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +               +N 
Sbjct: 71  YYGLGMMGITFPRFEAAVIAFIINY 95


>gi|241661638|ref|YP_002979998.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240863665|gb|ACS61326.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 217

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + +F LG    L     +R     T + +   YI  F     P L+ + + +    
Sbjct: 22  LMLSLMAFALGGTAGLVVL-FARVGRNATLQRVSKAYIQLF--QNTPLLMQMFIVF---- 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           + +  I L+ YT+A++AE+ R  + A+PRGQ EA+ +L + 
Sbjct: 75  -------FGASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASSSLAMG 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +  R V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + N T Q   I
Sbjct: 128 YFQQMRHVVLPQAVRLSIAPTVGFSVQIVKGTAVASIIGFEDLSKLGSVLANATFQPFLI 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             +    Y +L   ++L+ + L  K+
Sbjct: 188 YGLVAIGYFALCWPLSLYASHLEKKL 213



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 32/97 (32%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L+          G +V   R+  N  +  + + Y+++F+N P L+ +F ++  
Sbjct: 17  GLLATLMLSLMAFALGGTAGLVVLFARVGRNATLQRVSKAYIQLFQNTPLLMQMFIVFFG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                           G+ L               A 
Sbjct: 77  ASMAGFEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAI 113


>gi|15641372|ref|NP_231004.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121587995|ref|ZP_01677747.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121728528|ref|ZP_01681551.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147674160|ref|YP_001216919.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153212686|ref|ZP_01948343.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|153819357|ref|ZP_01972024.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153825276|ref|ZP_01977943.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|153828797|ref|ZP_01981464.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|183179358|ref|ZP_02957569.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227081531|ref|YP_002810082.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505059|ref|ZP_04394569.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229511271|ref|ZP_04400750.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229515732|ref|ZP_04405191.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229518389|ref|ZP_04407833.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229523538|ref|ZP_04412943.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229529564|ref|ZP_04418954.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229608063|ref|YP_002878711.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254848482|ref|ZP_05237832.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255745747|ref|ZP_05419695.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262158975|ref|ZP_06030087.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262169334|ref|ZP_06037026.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|298498556|ref|ZP_07008363.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9655853|gb|AAF94518.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121547736|gb|EAX57827.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121629192|gb|EAX61632.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|124116336|gb|EAY35156.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|126510102|gb|EAZ72696.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|146316043|gb|ABQ20582.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|148875750|gb|EDL73885.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|149741104|gb|EDM55163.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|183012769|gb|EDT88069.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227009419|gb|ACP05631.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227013277|gb|ACP09487.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229333338|gb|EEN98824.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229337119|gb|EEO02136.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229345104|gb|EEO10078.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229347501|gb|EEO12461.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229351236|gb|EEO16177.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229357282|gb|EEO22199.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229370718|gb|ACQ61141.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254844187|gb|EET22601.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255736822|gb|EET92219.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262022147|gb|EEY40856.1| amino acid ABC transporter permease protein [Vibrio cholerae RC27]
 gi|262029160|gb|EEY47812.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|297542889|gb|EFH78939.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|327484030|gb|AEA78437.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 365

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 123 WIWLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 182

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 183 RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSQGSEIDKLLR 232

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 233 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 292

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 293 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYS 352

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 353 IWLEGKLHTGHKR 365



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   L        L   +       +     +       +    +     + LS +    
Sbjct: 217 LPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMG 276

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +     +P +  +   +F   +LVLI   +  L   +      N++G +T S  F
Sbjct: 277 LIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVF 336

Query: 267 MSLYIALSCYTAAFIA 282
           ++L   + C+  +  +
Sbjct: 337 VALVFWIFCFGMSRYS 352


>gi|332163170|ref|YP_004299747.1| ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667400|gb|ADZ44044.1| ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862827|emb|CBX72968.1| inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia enterocolitica W22703]
          Length = 367

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 132/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P        T +++G V          +      T+ G  R  
Sbjct: 77  WVFIHARFG-QFMYGLYPIEQRWRINTTLIIGLVT---------LTPLFWRTMPGRRR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  + PL+V   LY     +  +                     T
Sbjct: 125 -----------YLAVWAVVYPLLVWVMLYGGFFGLNRVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L     +R       + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIAAVGIAGALPLGILLAL-----ARRSSMPVVRILSVVFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EA 
Sbjct: 215 ---------SVMLPLFMTEGTSIDKLIRALVGVVLFQSAYVAEVVRGGLQALPKGQTEAT 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAAAVYWIFCFSMSRYSQHLEKRFHTGR 364


>gi|310778237|ref|YP_003966570.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309747560|gb|ADO82222.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 212

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 110/225 (48%), Gaps = 15/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L +    +   A +++ + VL + L LF +           + + L    T++ 
Sbjct: 1   METQGMLIYILGGLKLTALLYIATGVLALPLGLFLSLGGVSKSVFVRRGIAL---YTWIF 57

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +   Y   +  PV+       G T++P F +  +      +A+  EI+R  +
Sbjct: 58  RGSPLLLQLFFVY---YGLPVM-------GITLTP-FTAASLTFILNYSAYTCEILRGCI 106

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+GQ EA+  LG+ + K  R ++LPQA+R  +P L+++ +NL+K+++L  ++G A++
Sbjct: 107 QSIPKGQYEASRVLGMNYFKTMRHIILPQALRMSLPALSNEAVNLVKDTALISSIGMAEI 166

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +     I+ +    I   ++   IYL++S +I L   +   K  +
Sbjct: 167 LRNSKEIVARDF-TIMPFILCGLIYLAVSSIIILIFKKAEDKYEI 210



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 33/86 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G   T  L  +  + A  +G  +  G +S +  V     +Y  +FR  P L+ +FF
Sbjct: 9   YILGGLKLTALLYIATGVLALPLGLFLSLGGVSKSVFVRRGIALYTWIFRGSPLLLQLFF 68

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +Y  +  +               LN 
Sbjct: 69  VYYGLPVMGITLTPFTAASLTFILNY 94


>gi|302130067|ref|ZP_07256057.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
          Length = 277

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 16/256 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
             +    ++          D  + +      N  GL          A + +F  V  IV+
Sbjct: 28  LYLTWLVMFVLFAGFFLSFDLKLAIILDKLPNLIGLHLAPNGFLQGAALTLFVSVCLIVV 87

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           S+   F T L+R         +   Y S F    L          Q+      L Q   +
Sbjct: 88  SVLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLI--------QILLIYLGLPQLGIV 139

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G+       +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LP
Sbjct: 140 PGAI-----AAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIFWRVTLP 194

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +
Sbjct: 195 QAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIM 254

Query: 378 SIMIALFMNRLNAKIA 393
           SI + L  +RL     
Sbjct: 255 SIGLELLQSRLEKHYG 270



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +++   ++ + ++G +    RLS++ +   I   Y   FR  P L+ I  +
Sbjct: 70  FLQGAALTLFVSVCLIVVSVLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLI 129

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +  +P         + LN 
Sbjct: 130 YLGLPQLGIVPGAIAAGVIALSLNY 154


>gi|283832262|ref|ZP_06352003.1| amino acid ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
 gi|291071904|gb|EFE10013.1| amino acid ABC transporter, permease protein [Citrobacter youngae
           ATCC 29220]
          Length = 235

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLISSVVMGGILALFL-AIGRVSSNKFIQF--PIWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   +F+  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTDFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSSFKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|190893811|ref|YP_001980353.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190699090|gb|ACE93175.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 271

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 2/195 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R    F+ +  + +P+L +  ++ F     ++ A  + +    P       +     
Sbjct: 79  IVLRQIARFYIEIIRGIPILVLLFYIAFVGAPGLVSAYNFIITPLVPAGIAEPIL--VRD 136

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                   IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R 
Sbjct: 137 LSLMWRAIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRV 196

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I PPL++ +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++
Sbjct: 197 IFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLS 256

Query: 383 LFMNRLNAKIALKEK 397
           L + R+  K+  K +
Sbjct: 257 LALRRIEKKMKQKPR 271


>gi|330981546|gb|EGH79649.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 242

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 76/175 (43%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I T LI G+P LVL+ L +        +              F +  I L     A+  E
Sbjct: 65  IYTTLIRGVPDLVLMLLIFYSLQTWLTMLTDAMEWEYIEINPFGAGVITLGFIYGAYFTE 124

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R  +++VPRGQ+EAA A GL   +  R V+ PQ MR  +P + + +  LLK ++L   
Sbjct: 125 TFRGAILSVPRGQVEAATAYGLKRGQRFRYVVFPQMMRYALPGIGNNWQVLLKATALVSI 184

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G ADLV         T Q    +++   IYL ++      +       A   ++
Sbjct: 185 IGLADLVKASQDAGKSTYQLFYFLVLAALIYLLITSASNFALRWAERYYAAGSRE 239


>gi|257487408|ref|ZP_05641449.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289628607|ref|ZP_06461561.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|330867830|gb|EGH02539.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|331009000|gb|EGH89056.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 365

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGIAFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|224282756|ref|ZP_03646078.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313139916|ref|ZP_07802109.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313132426|gb|EFR50043.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 362

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 120/274 (43%), Gaps = 21/274 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V W+  +   +F  +  L+++              +            +  L    +
Sbjct: 21  IRIVNWVAAL---IFVGVLVLILMRLHNPPDGENQLSWELWKPALEREAWTDFYLPGLWM 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    V S V G+V  +      R       +A+  + +       +  L++   +
Sbjct: 78  TVKASIVAVVGSVVFGLVFGV-----GRLLPNVVLRAISSVVVEFCRAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +           F F G S+  P + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 W-----------FAFAGLSS--PSYWAVVLALVLYNGSVVAELVRSGVGNLPNGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTETQSLMQIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +++   +Y  +  +++     L +++  +
Sbjct: 240 NILQTLVVAAVVYFIVCWLLSRLAEWLPSRMQQR 273



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T   +   ++ + + G + G GRL  N ++  I  V V
Sbjct: 56  ELWKPALEREAWTDFYLPGLWMTVKASIVAVVGSVVFGLVFGVGRLLPNVVLRAISSVVV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + L  P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLSSPSYWAVVLALVLYN 155


>gi|222102914|ref|YP_002539953.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739515|gb|ACM40248.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 250

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + VFS  L   LS+    L+R    +T +     +  TFL++    + L+ L    +F
Sbjct: 33  LILSVFSIALAFPLSILL-ALARMSKWRTLR-----WPVTFLVYVTRGVPLLMLILWCYF 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P F+++   L  Y + F++E+VRSG++A+  GQMEAA ALG +
Sbjct: 87  LVPLLTGADV-------PSFITMLTTLVVYQSCFLSEVVRSGIVALGHGQMEAAKALGHS 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
           +  A R V+LPQA+ ++IP + S +++ +K+++L   +   DL      + N    Q  +
Sbjct: 140 YPSAMRYVVLPQALYNVIPSILSTFVSTIKDTTLGSVINVPDLTFAANQVNNDLLTQPFQ 199

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LI   IY  +   +     RL   I+ + 
Sbjct: 200 VYLILALIYYVICWSLTHAAKRLEGSISRRR 230



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+   +  A  +  L+   R+S  + + W     V V R +P L++I + Y
Sbjct: 26  LGGLANTLILSVFSIALAFPLSILLALARMSKWRTLRWPVTFLVYVTRGVPLLMLILWCY 85

Query: 150 KSVL 153
             V 
Sbjct: 86  FLVP 89


>gi|167750328|ref|ZP_02422455.1| hypothetical protein EUBSIR_01302 [Eubacterium siraeum DSM 15702]
 gi|167656688|gb|EDS00818.1| hypothetical protein EUBSIR_01302 [Eubacterium siraeum DSM 15702]
 gi|291556411|emb|CBL33528.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium siraeum V10Sc8a]
          Length = 247

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 13/219 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LH 245
            KIF F+ +  I L L    L +    K    L  LYI   ++ G P ++ I + Y  L 
Sbjct: 33  LKIFGFTLLFSIPLGLIVAAL-KMCRFKPISWLTNLYI--LIMRGTPLMLQIIVVYYALP 89

Query: 246 F--------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           F           V    + +  +  S  F  + IA     AA+ AEI R G+ ++PRGQ 
Sbjct: 90  FLKTATKGSGGFVESLLSGVDPAAESFMFTMVIIAFVLNYAAYFAEIFRGGIESIPRGQY 149

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALG+T  +    ++LPQ ++ I+P  +++ + L+K++SLA  V +++++      +
Sbjct: 150 EAAAALGMTKAQTFFRIILPQVIKRIVPASSNEVITLVKDTSLANVVAYSEIMLAAKQQM 209

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                ++  + I    Y  ++ ++      +  K+    
Sbjct: 210 -MNYSSLVPLFIAGVFYFVMATVLTALFGFIEKKLNYYR 247



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  +    ++ +  +G +V A ++   K ++W+  +Y+ + R  P ++ I  +
Sbjct: 25  LLENLIPTLKIFGFTLLFSIPLGLIVAALKMCRFKPISWLTNLYILIMRGTPLMLQIIVV 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           Y ++         +     G F+ +               + + +FVL
Sbjct: 85  YYAL-----PFLKTATKGSGGFVESLLSGVDPAAESFMFTMVIIAFVL 127


>gi|319897354|ref|YP_004135550.1| arginine transporter subunit [Haemophilus influenzae F3031]
 gi|317432859|emb|CBY81224.1| arginine transporter subunit [Haemophilus influenzae F3031]
          Length = 221

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F     A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVFA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|229817230|ref|ZP_04447512.1| hypothetical protein BIFANG_02490 [Bifidobacterium angulatum DSM
           20098]
 gi|229785019|gb|EEP21133.1| hypothetical protein BIFANG_02490 [Bifidobacterium angulatum DSM
           20098]
          Length = 367

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 112/271 (41%), Gaps = 21/271 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            +++ WI  +   +F  +  L+++              +            +  L     
Sbjct: 22  IRIINWIAGI---IFAIVVVLILMRLHNPPDGENQLSWELWKPALDPEAWTDFYLPGLWA 78

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    V + V G+V  +      R       + +    +       +  +++   +
Sbjct: 79  TIRASLLAVVGAVVFGLVFGI-----GRLMPNPLVRVVSGAIVEFARAVPVLLMMIFFWR 133

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + S+ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 134 WFAFVGLP-------------SPAYWSVVLALIIYNGSVVAELVRSGVGNLPDGQREASL 180

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 181 ALGLTQTQSLMQIEVPQAIVAMLPAAVTQLVVVLKDTALGSIIMYTDLLQQSRRLGSMYF 240

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++ +++   IY     +++     L +++
Sbjct: 241 NILQTLVVAGVIYFIACWLLSRLAEWLPSRL 271



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 18/151 (11%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R+ N    II A+++ +I +   +N  +   + +       L + A              
Sbjct: 23  RIINWIAGIIFAIVVVLILMRL-HNPPDGENQLSWE-----LWKPA-----------LDP 65

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            ++    L G   T   +   ++ A + G + G GRL  N LV  +    VE  R +P L
Sbjct: 66  EAWTDFYLPGLWATIRASLLAVVGAVVFGLVFGIGRLMPNPLVRVVSGAIVEFARAVPVL 125

Query: 143 VVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           +++ F ++      LP P +  V+   +  N
Sbjct: 126 LMMIFFWRWFAFVGLPSPAYWSVVLALIIYN 156


>gi|212716944|ref|ZP_03325072.1| hypothetical protein BIFCAT_01888 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660229|gb|EEB20804.1| hypothetical protein BIFCAT_01888 [Bifidobacterium catenulatum DSM
           16992]
          Length = 380

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 110/271 (40%), Gaps = 21/271 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +    F  +  L+++              +            +  L     
Sbjct: 21  IRIVNWIAGI---AFAIVVVLILMRLHNPPDGENQLSWELWKPALDAEAWTDFYLPGLWA 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    + + + G++  +      R       +A+    +       +  L++I   
Sbjct: 78  TIRASVLAVIGAVLFGLLFGI-----GRLLPNIVIRAISGAVVEFARAVPV-LLLMIFFW 131

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
               F                SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 132 RWFAF------------AGLASPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTRTQSLMEIEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++ +++   IY     +++     L  ++
Sbjct: 240 NILQTLVVAAVIYFIACWLLSRLAEWLPERM 270



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 38/100 (38%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T   +   +I A + G L G GRL  N ++  I    V
Sbjct: 56  ELWKPALDAEAWTDFYLPGLWATIRASVLAVIGAVLFGLLFGIGRLLPNIVIRAISGAVV 115

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           E  R +P L+++ F ++              +   + + N
Sbjct: 116 EFARAVPVLLLMIFFWRWFAFAGLASPAYWAVVLALVIYN 155


>gi|217033979|ref|ZP_03439402.1| hypothetical protein HP9810_883g49 [Helicobacter pylori 98-10]
 gi|216943612|gb|EEC23060.1| hypothetical protein HP9810_883g49 [Helicobacter pylori 98-10]
          Length = 237

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L      +HF  KT  A    Y+S  LI G P LV I + + 
Sbjct: 41  PLAIISFILGLFIAVFVALIKIAPPKHFIHKTLLAGVNFYVS--LIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|118475005|ref|YP_892321.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118414231|gb|ABK82651.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           P         +       S    T+  +    + + V+G++  + A          TGK 
Sbjct: 6   PFALWKWEDTLAHWQMFASGLGFTLGVSILALILAGVIGVISGMMA----------TGKI 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L Y S   +       L+   + L+F  P +              F    + +  Y  
Sbjct: 56  AILRYCSRIYVEVFQNTPLVIQLFFLYFALPPM--------GINLDVFTIGVLGIGAYHG 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+++E+VRSG+ ++P+GQ EAA + G ++ +    ++LPQ+++ I+PP T+Q +NL+KNS
Sbjct: 108 AYMSEVVRSGINSIPKGQFEAATSQGFSYIEQMMYIILPQSIKIILPPATNQAVNLIKNS 167

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           S+ + +  A+L+ +  +  + +        +   +Y  +   +A++      K+ 
Sbjct: 168 SVLLIIAGAELMYMSDSYASDSLNYATSYSVAGILYFIMCFPLAMWARNYEEKLK 222



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 43/99 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    ++      G   T  ++   +I A +IG + G        ++ +  R+YVEVF+N
Sbjct: 12  WEDTLAHWQMFASGLGFTLGVSILALILAGVIGVISGMMATGKIAILRYCSRIYVEVFQN 71

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            P ++ +FFLY ++  +    D   +   G+   +    
Sbjct: 72  TPLVIQLFFLYFALPPMGINLDVFTIGVLGIGAYHGAYM 110


>gi|86360915|ref|YP_472802.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285017|gb|ABC94075.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 208

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 12/209 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            KI + + +LG  +++     L+             +   +  I G P LV +   + + 
Sbjct: 8   FKITILATILGAAVAMVVGLGLAIARRSPVAAISRTVGFVSEFIRGTPLLVQLYFIFYVL 67

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D                    +  I +  + A + AE+ R+G+  V RGQ EAA A  L
Sbjct: 68  PDI-----------GIRLSPLTAGVIGIGIHYATYTAEVYRAGIENVSRGQWEAAKATNL 116

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T R+A   V+LPQA+  +IP L + ++ + K + L  A+   +L++   +I N   + IE
Sbjct: 117 TTRQAWIHVILPQAIPPMIPALANYFIAMFKETPLLSAITVLELMNQAKSIANSNYRYIE 176

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + +    +L +S++  + +  L  + A 
Sbjct: 177 PMTLVGVFFLVISLVSVVGLRWLEERYAR 205



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 27/70 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T      G   A ++G  +   R S    ++       E  R  P LV ++F+
Sbjct: 4   LLEGFKITILATILGAAVAMVVGLGLAIARRSPVAAISRTVGFVSEFIRGTPLLVQLYFI 63

Query: 149 YKSVLSVLPI 158
           +  +  +   
Sbjct: 64  FYVLPDIGIR 73


>gi|224826829|ref|ZP_03699929.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224601049|gb|EEG07232.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 5/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ + S +  +++ L     S+    +  + L   Y  T LI  +P LV++ L + 
Sbjct: 15  WMTIKLALLSMLASVLIGLVGAS-SKLSGSRLLRGLATGY--TTLIRSVPDLVIMLLLFY 71

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L        ++  +    + P F++  + L     A+  E  R    AVPRGQ+EAA+A
Sbjct: 72  SLQMLLNQATEWAGVEQIDIDP-FLAGVVTLGFIYGAYFTETFRGAFQAVPRGQLEAAVA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G+   +  R VL PQ MR  +P + + +  ++K ++L   +G +D+V         + Q
Sbjct: 131 YGMKPWQVFRRVLFPQMMRFALPGIGNNWQVMIKATALVSIIGLSDIVKATQDAGKSSMQ 190

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                ++   IYL+++ +    +  L  + ++  +K
Sbjct: 191 LFYFCVVGGLIYLAITTVSNGALLWLERRYSVGVRK 226



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 38/78 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G   T  LA   M+ + +IG +  + +LS ++L+  +   Y  + R++P LV+
Sbjct: 6   FGPLIASGTWMTIKLALLSMLASVLIGLVGASSKLSGSRLLRGLATGYTTLIRSVPDLVI 65

Query: 145 IFFLYKSVLSVLPIPDHS 162
           +  L+ S+  +L      
Sbjct: 66  MLLLFYSLQMLLNQATEW 83


>gi|207092331|ref|ZP_03240118.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 240

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 44  PLAIISFILGLFIAVFVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEIFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|167033608|ref|YP_001668839.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860096|gb|ABY98503.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 215

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R       +    +Y+S F   G P LV + + Y           F           F 
Sbjct: 41  GRLSPVIILRWAAKIYVSVF--RGTPCLVQLFIIY-----------FGGPQIGIELEPFS 87

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L    AA+++E +R  +  V  GQ E A ++G + R+    +++PQA++ +I PL
Sbjct: 88  AAVIGLGMNIAAYMSESIRGAIDNVDPGQEEGARSIGFSRRQTLLFIIIPQALKLMIRPL 147

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
               + L+K S+L  A+   +L       I+ T +  EI ++   +Y+ +   +   +  
Sbjct: 148 GVNAIGLIKGSALVSAISVVELTYTAQRFISSTYKPFEIFMVSALLYIVMVYSVKYLVEV 207

Query: 388 LNAKIALK 395
           L+ + A K
Sbjct: 208 LDRRYATK 215



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           AGRLS   ++ W  ++YV VFR  P LV +F +Y     +    +       G+ +N   
Sbjct: 40  AGRLSPVIILRWAAKIYVSVFRGTPCLVQLFIIYFGGPQIGIELEPFSAAVIGLGMNIAA 99

Query: 176 LS 177
             
Sbjct: 100 YM 101


>gi|116254281|ref|YP_770119.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258929|emb|CAK10038.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 270

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 10/216 (4%)

Query: 187 AKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIA 239
              FV + VLG+ + L         R    F+ +  + +P+L +  ++ F G P LV   
Sbjct: 58  LVAFVLATVLGLGICLLGMADSQVLRQIARFYIEIIRGIPILVLLFYVAFVGAPALV--- 114

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             Y       V                    IAL+   ++FIAEI R+G  +V  GQ+EA
Sbjct: 115 AAYNFLISPLVTSGMAEPILVRDLSLMWRAIIALTVGYSSFIAEIFRAGFQSVDLGQIEA 174

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGL+  +  R V+ PQA+R I PPL++ +++++K+SSL   +G AD+  +G      
Sbjct: 175 AKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYAAG 234

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + +  E   I  +IYL L+I ++L + R    +  +
Sbjct: 235 SFRFFETYSIVTYIYLILTIGLSLALRRTEKWMKSR 270


>gi|22127991|ref|NP_671414.1| amino acid ABC transport system permease [Yersinia pestis KIM 10]
 gi|21961137|gb|AAM87665.1|AE014013_10 putative amino acid ABC transport system permease [Yersinia pestis
           KIM 10]
          Length = 269

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   V S + G+  ++  T L        G    +L     L 
Sbjct: 28  WRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGLF 87

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 88  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 137

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 138 MAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 197

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 198 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 242


>gi|171743315|ref|ZP_02919122.1| hypothetical protein BIFDEN_02446 [Bifidobacterium dentium ATCC
           27678]
 gi|283455712|ref|YP_003360276.1| glutamate transport system permease gluD [Bifidobacterium dentium
           Bd1]
 gi|171278929|gb|EDT46590.1| hypothetical protein BIFDEN_02446 [Bifidobacterium dentium ATCC
           27678]
 gi|283102346|gb|ADB09452.1| Glutamate transport system permease protein GluD [Bifidobacterium
           dentium Bd1]
          Length = 377

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 109/273 (39%), Gaps = 21/273 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V W+  +   VF  +  L+++              +            +  L     
Sbjct: 21  IRIVNWVAGI---VFAIVLVLMLMRLHNPPDGENQLSWELWKPALDSEAWTDFYLPGLWA 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+       + +   G+V  +      R       + +    +       +  L++   +
Sbjct: 78  TVRATILAVIGAVAFGLVFGI-----GRLLPSLIIRTVSGAIVEFARAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTRTQSLMQIEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++ +++   +Y     +++     L  ++  
Sbjct: 240 NILQTLVVAAVVYFIACWLLSRLAEWLPERMQR 272



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       +I A   G + G GRL  + ++  +    V
Sbjct: 56  ELWKPALDSEAWTDFYLPGLWATVRATILAVIGAVAFGLVFGIGRLLPSLIIRTVSGAIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFARAVPVLLLMIFFWRWFAFAGLPSPAYWAVVLALVIYN 155


>gi|241666975|ref|YP_002985059.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862432|gb|ACS60097.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 213

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 14/213 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +    FV G +  L    L+R       + L   YI+ F   G P L+ + + Y  
Sbjct: 15  WTVLLSAVGFVCGGIAGLGV-ALARASGIPLLERLTAGYIAVF--QGTPLLMQLFVVYY- 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                            +   ++++ I L+ + +A++ EI R  + AVPRGQ EAA AL 
Sbjct: 71  ----------GLALVGLMLDSWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQTEAAKALS 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L +    + V+LPQA+R  +P      + L+K +SLA  VGF +L   G  I NQ  Q +
Sbjct: 121 LRYISRMKDVILPQALRVSLPATIGFLVQLIKGTSLASIVGFTELTRAGNIISNQIFQPL 180

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +   +Y  +   + +   RL  + A   +
Sbjct: 181 TVFGVVGILYFLMCCPLTILGARLERRFAASAR 213



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   T  L+  G +   I G  V   R S   L+  +   Y+ VF+  P L+ +F +
Sbjct: 9   LLIGLKWTVLLSAVGFVCGGIAGLGVALARASGIPLLERLTAGYIAVFQGTPLLMQLFVV 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  V  + D  + +  G+ L+              A
Sbjct: 69  YYGLALVGLMLDSWVAVAIGLTLHASAYLGEIWRGSIEA 107


>gi|319791543|ref|YP_004153183.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315594006|gb|ADU35072.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 109/233 (46%), Gaps = 10/233 (4%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                  ++N  +     ++       +   + G +L+L   RLS      T  A+    
Sbjct: 7   SFYNWDVISNFVIKGFYFSIMLTVVATIGGVIFGTILALM--RLSGKKWLDTPAAI---- 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                + G+ ++ L+ +        P      F    +     +S  I    + AA+ +E
Sbjct: 61  ----YVNGMRSIPLVMVILWFFLLVPASFYSLFGSLGSNYRSEISAVITFVAFEAAYFSE 116

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++PRGQ+ A  A+G+T+ +  RLV+LPQA R+++P L +Q + L +++SL  A
Sbjct: 117 IMRAGIQSIPRGQVNAGQAVGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLVYA 176

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G  D++    T     G+ IE  L+   +Y  +   ++  + RL+ KIA+  
Sbjct: 177 IGAYDMLKGFETAGKNFGRPIEAYLLAAVVYFVMCYALSWLVKRLHKKIAIIR 229



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + GF  +  L     I   I GT++   RLS  K +     +YV   R+IP ++VI + +
Sbjct: 19  IKGFYFSIMLTVVATIGGVIFGTILALMRLSGKKWLDTPAAIYVNGMRSIPLVMVILWFF 78

Query: 150 KSVLSVL 156
             V +  
Sbjct: 79  LLVPASF 85


>gi|212712948|ref|ZP_03321076.1| hypothetical protein PROVALCAL_04046 [Providencia alcalifaciens DSM
           30120]
 gi|212684426|gb|EEB43954.1| hypothetical protein PROVALCAL_04046 [Providencia alcalifaciens DSM
           30120]
          Length = 226

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 104/229 (45%), Gaps = 6/229 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        + F        AKI   + V+GI+       + R    K  + L   
Sbjct: 1   MAYQFDWSSIEPSIPFLVDGFIITAKITAAAIVVGILWGTVL-AVMRLSSIKPLRWLAAF 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++TF         L+ + +  +   P + Q             +S  +A   + AA+ +
Sbjct: 60  YVNTFRSVP-----LVMVLFWFYLVVPNILQNVLGLSPKNDIRLISAVVAFCLFEAAYYS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++ +GQ  A++ALG+T  +  RLV+LPQA R+++P L +Q + L +++SL  
Sbjct: 115 EIIRAGIQSISKGQASASLALGMTQMQTMRLVVLPQAFRAMVPLLLTQGIVLFQDTSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +G  D       I  + G  +E+IL    IY   S   ++ +N L  +
Sbjct: 175 VLGLTDFFRTATNIGERDGTQVEMILFAGLIYFIFSFGASMLVNYLKKR 223



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 40/67 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF+ T  +  + ++   + GT++   RLS+ K + W+   YV  FR++P ++V+F+ 
Sbjct: 17  LVDGFIITAKITAAAIVVGILWGTVLAVMRLSSIKPLRWLAAFYVNTFRSVPLVMVLFWF 76

Query: 149 YKSVLSV 155
           Y  V ++
Sbjct: 77  YLVVPNI 83


>gi|187923120|ref|YP_001894762.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714314|gb|ACD15538.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 92/233 (39%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L+    T+        F+FVLG++ +      +R  +        +  + 
Sbjct: 1   MFLQGYGPLLLNGTWQTVKLAVLSLAFAFVLGLLGAAAKLSKNRFSYG-------VGTVY 53

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T L+ G+P LVL+ L +                       F++    L     A+  E  
Sbjct: 54  TTLVRGVPDLVLMLLLFYSIQIWLNNLTDLLGWDQIDIDPFVAGVAVLGFIYGAYFTETF 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +AVPRGQ+EA  A G+T  +    V+ PQ MR  +P + + +  ++K ++L   +G
Sbjct: 114 RGAFLAVPRGQLEAGAAYGMTGWQVFTRVMFPQMMRFALPGIGNNWQVMVKATALVSIIG 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            AD+V         T +     L    IYL ++ +    +  L  + +   +K
Sbjct: 174 LADVVKASQDAGKGTLRFFFFTLFAGAIYLVITTVSNFVLMYLEKRYSTGVRK 226



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  LA   +  A ++G L  A +LS N+    +  VY  + R +P LV+
Sbjct: 6   YGPLLLNGTWQTVKLAVLSLAFAFVLGLLGAAAKLSKNRFSYGVGTVYTTLVRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|15645555|ref|NP_207731.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter
           pylori 26695]
 gi|2314077|gb|AAD07984.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter
           pylori 26695]
          Length = 237

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L      +HF  K   A    Y+S  +I G P LV I + + 
Sbjct: 41  PLAIISFILGLCIAVFVALIKIAPPKHFIHKALLAGVNFYVS--IIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|26991171|ref|NP_746596.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148546670|ref|YP_001266772.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24986216|gb|AAN70060.1|AE016645_6 basic amino acid ABC transporter, permease protein [Pseudomonas
           putida KT2440]
 gi|148510728|gb|ABQ77588.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|313497724|gb|ADR59090.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P  ++    L     A+++E  R   + +P+GQ EA +
Sbjct: 71  GGQDIINRVAPLLGYEDYIDLNP-LIAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEAGV 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++ R+    + +PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSPRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL L+ +  L +  L  + ++  K
Sbjct: 190 EPFTFFLAVAALYLVLTSVSLLALKYLERRYSVGVK 225



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     ++      +     + LN 
Sbjct: 65  ILLIFYGGQDIINRVAPLLGYEDYIDLNP 93


>gi|78067201|ref|YP_369970.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77967946|gb|ABB09326.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 80/175 (45%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T LI G+P LVL+ L +        +              F++  + L     A+  E
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNMATDALGWDQIDIDPFLAGVLVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   
Sbjct: 112 TFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFPQMMRFALPGIGNNWQVLVKSTALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     LI   +YL+++ +    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAITTISNFVLMWLEKRYSTGVRK 226


>gi|326792535|ref|YP_004310356.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326543299|gb|ADZ85158.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 246

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/191 (25%), Positives = 101/191 (52%), Gaps = 14/191 (7%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R   ++  K  K +   YI  ++I G P+++ I L + + F    + +    G       
Sbjct: 70  RSCWYYIVKFLKWITRAYI--YIIRGTPSVLQIVLMWNVVFANATIDRIWVGG------- 120

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                IA    + A++AE++R+G+  + +GQMEA  +LGL + +  R V+LPQA   ++P
Sbjct: 121 -----IAFGINSGAYMAELIRAGIQGIDKGQMEAGRSLGLGYGQTMRHVILPQAFIQMLP 175

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              S+++ L+K +++   +G  DL+     I+++T  A++ +LI    Y  ++ ++ +FM
Sbjct: 176 AFVSEFIILIKETAIIGFIGGLDLMKAQDIIMSRTFNALQPLLIVGVCYFIITSLLTVFM 235

Query: 386 NRLNAKIALKE 396
            ++  K+ + +
Sbjct: 236 RQIEKKVNVSK 246


>gi|229591026|ref|YP_002873145.1| putative inner membrane component of binding-protein-dependent
           amino acid transport system [Pseudomonas fluorescens
           SBW25]
 gi|229362892|emb|CAY49802.1| putative inner membrane component of binding-protein-dependent
           amino acid transport system [Pseudomonas fluorescens
           SBW25]
          Length = 222

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 18/222 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+      F+ S  +G+VL+L      R           L + ++ +I  +  L
Sbjct: 18  LQGAWVTIQITVLSFLLSSAIGLVLALLKLSPIR----------ALSWTASTIINVIRGL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I   + ++F  P +              F +  I +    +A+ AE  R+G+IAV +G
Sbjct: 68  PIIVQLFYIYFVLPDM--------GVHLTAFYAGVIGMGIAYSAYQAENFRTGIIAVEQG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   G  
Sbjct: 120 QREAAEALGMRSTLMMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRQGQL 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I + T Q + +  +   +YL +S+ +   + R+   +  ++K
Sbjct: 180 IASSTFQNMTVYTLVALLYLLMSLPLVYGLRRMEQHLGRRKK 221



 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 39/108 (36%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            +   +   +L G   T  +     + ++ IG ++   +LS  + ++W     + V R +
Sbjct: 8   QNAQDFLPILLQGAWVTIQITVLSFLLSSAIGLVLALLKLSPIRALSWTASTIINVIRGL 67

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           P +V +F++Y  +  +            GM +               A
Sbjct: 68  PIIVQLFYIYFVLPDMGVHLTAFYAGVIGMGIAYSAYQAENFRTGIIA 115


>gi|218888237|ref|YP_002437558.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218759191|gb|ACL10090.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 13/241 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +V     +L         L     + +     + G         L R       + 
Sbjct: 1   MQWDVVWRNFDYLLVGSWPQGPLGGLAMSVVLAIGGIFGAFWLGLGFGLLRLSDRWWLRL 60

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             ++Y+   +I G+P L+LI   Y L            I      PE  S  +A   +T 
Sbjct: 61  PAIIYVE--IIRGIPLLMLIFWFYFLA----------PIVLGRTLPEAESALVAFIVFTG 108

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEIVR+G++A+P GQMEAA   GL+  +A   V+LPQA+R++IP   +Q+++L K++
Sbjct: 109 AYIAEIVRAGVLALPHGQMEAARGTGLSKSQAMIYVILPQALRNMIPSFVNQFVSLTKDT 168

Query: 339 SLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           SLA  +G ++L      I N+      E+      +Y  +   +     R+  ++A  + 
Sbjct: 169 SLAYIIGVSELTRTATQINNRELTAPAELFFTIAVLYFIVCWTLTAASRRMERQMARYQA 228

Query: 398 K 398
           +
Sbjct: 229 R 229



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 36/82 (43%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            +++      Y    S+    L G   +  LA  G+  A  +G   G  RLS    +   
Sbjct: 2   QWDVVWRNFDYLLVGSWPQGPLGGLAMSVVLAIGGIFGAFWLGLGFGLLRLSDRWWLRLP 61

Query: 129 CRVYVEVFRNIPPLVVIFFLYK 150
             +YVE+ R IP L++IF+ Y 
Sbjct: 62  AIIYVEIIRGIPLLMLIFWFYF 83


>gi|297198788|ref|ZP_06916185.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|197717403|gb|EDY61437.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 277

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 19/209 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              FV   VLG+V++L      R       +    +YI  F       L+ I +   +  
Sbjct: 78  LSGFVVGLVLGMVIALM-----RLSSVGPYRWFAGVYIEIFRGLPA-LLIFIFIGVAVPL 131

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P         G       +            ++AE +R+G+ AVP+GQMEAA +LG +
Sbjct: 132 AFPGTEIIGGTYGKVALALGLVAAA--------YMAETIRAGIQAVPKGQMEAARSLGFS 183

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
             +A   +++PQA R I+PPLT++ + L K+SSL + +G      +L   G  + + T  
Sbjct: 184 PARAMVSIIIPQAFRIILPPLTNELVLLFKDSSLVLFLGVTLEERELSKYGRDLASTTAN 243

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  I L+    YL ++I +   + R+ AK
Sbjct: 244 STPI-LVAGLCYLLVTIPLGFVVRRMEAK 271



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 37/77 (48%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +D  +   I +   NT     SG +   ++G ++   RLS+     W   VY+E+FR +P
Sbjct: 58  ADQMFPDVITLALKNTVLYTLSGFVVGLVLGMVIALMRLSSVGPYRWFAGVYIEIFRGLP 117

Query: 141 PLVVIFFLYKSVLSVLP 157
            L++  F+  +V    P
Sbjct: 118 ALLIFIFIGVAVPLAFP 134


>gi|77409325|ref|ZP_00786028.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77172057|gb|EAO75223.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 201

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 95/178 (53%), Gaps = 3/178 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           L     ++  G P +V I + +  +HF+   L   +F          +   I +S  + A
Sbjct: 23  LANFYVWVFRGTPMVVQIMIAFAWMHFNN--LPTISFGVLDLDFTRLLPGIIIISLNSGA 80

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I+EIVR+G+ AVP GQ+EAA +LG+  +   R V+LPQA  +I+P L ++++ ++K+S+
Sbjct: 81  YISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFXNILPALGNEFITIIKDSA 140

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L   +G  +L +   +++  T   +  +L   F YL L+ +++  + ++   +    K
Sbjct: 141 LLQTIGVMELWNGAQSVVTATYSPVAPLLFAAFYYLMLTTILSALLKQMEKYLGKGVK 198


>gi|312959229|ref|ZP_07773747.1| glutamate/aspartate transport system permease [Pseudomonas
           fluorescens WH6]
 gi|311286489|gb|EFQ65052.1| glutamate/aspartate transport system permease [Pseudomonas
           fluorescens WH6]
          Length = 223

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 7/230 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +      M    ++ V   V GI+L      L R    K    +   Y+
Sbjct: 1   MDFDFSGIIPAIPGLWNGMVMTLQLMVMGVVGGIILGTLL-ALMRLSSSKLLSRVAGAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F      ++ L+ +    +   P + ++   G  T    F S  +A   + AA+  EI
Sbjct: 60  NYFR-----SIPLLLVITWFYLAVPFVLRW-ITGEDTPIGAFTSCVVAFMMFEAAYFCEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++P+GQM AA A+G+T+ +  RL++LPQA R + P L  Q + L +++SL   V
Sbjct: 114 VRAGVQSIPKGQMSAAQAMGMTYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D ++   +  +  G++ E ++    +Y  +S   +L + RL  + A+
Sbjct: 174 GLVDFLNSARSNGDIIGRSNEFLIFAGVVYFIISFSASLLVKRLQKRFAV 223



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   I+GTL+   RLS++KL++ +   YV  FR+IP L+VI + 
Sbjct: 15  LWNGMVMTLQLMVMGVVGGIILGTLLALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 75  YLAVPFVLRWITGEDTPIGAFTSCVVAFMMFEAAYFCEI 113


>gi|300697545|ref|YP_003748206.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074269|emb|CBJ53814.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CFBP2957]
          Length = 250

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 10/211 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +   VLGI L+   + L      +     PL    T L++ +  + L+     ++F
Sbjct: 30  IACTLILSVLGIGLAFPLSVL--LALARLSPWRPLHASVTALVYVVRGVPLLMWILWVYF 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   N  G       F ++   L  Y   +++E+VR+G+ A+P+GQMEAA ALG +
Sbjct: 88  LVPLLIGNNVSG-------FTTMVCTLVIYEGVYLSEVVRAGIEALPKGQMEAARALGHS 140

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           +  A RLV+LPQA+ +++P + +Q+++ +K ++L   +   +L      I N    +  +
Sbjct: 141 YFGAMRLVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQ 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I  +   IY  +   +      L  +IA K 
Sbjct: 201 IFFMLAVIYFVVCWSLTRTARALEHRIAAKR 231



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+  G+  A  +  L+   RLS  + +       V V R +P L+ I ++Y
Sbjct: 27  LGGIACTLILSVLGIGLAFPLSVLLALARLSPWRPLHASVTALVYVVRGVPLLMWILWVY 86

Query: 150 KSVL 153
             V 
Sbjct: 87  FLVP 90


>gi|298485802|ref|ZP_07003881.1| ABC-type amino acid transport system, permease component yhdY
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298159828|gb|EFI00870.1| ABC-type amino acid transport system, permease component yhdY
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 365

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGIAFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|294083905|ref|YP_003550662.1| amino acid ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663477|gb|ADE38578.1| amino acid ABC transporter permease protein [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 287

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 19/256 (7%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +       +       +      +  G F+         +T+       + S V+G + 
Sbjct: 51  LIYAGAAAMEYRWQWYRVGPFFYRMIDGEFIPGPLFKGIIVTLQLAGISSILSIVIGALT 110

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           ++      R  +   G+++   Y+   +I   P LV + + Y +            +   
Sbjct: 111 AI-----GRMSNSIAGRSIASTYLE--IIRNTPLLVQLFMFYFV------------LAPI 151

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F +  + L+ +  +F AEI+R G+ AV RGQ EAA A GL+     R V++PQA+
Sbjct: 152 FGIDRFWAGVLCLAAFEGSFAAEIIRGGIQAVERGQYEAADATGLSKFDKYRYVIVPQAL 211

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
             I+PPLT   ++L+K+S++   +  A+L + G  +I+ T  A EI  I   +YL L+  
Sbjct: 212 PLILPPLTGLLISLIKHSAIVSVIAVAELTTEGLNLISDTYMAFEIWFIVAGMYLVLTTS 271

Query: 381 IALFMNRLNAKIALKE 396
           +++ +N L  K+    
Sbjct: 272 LSVMVNILEVKMNRAR 287



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87
             Q+  A+LL  I  W +      ME         +      + +               
Sbjct: 35  LWQVAQAILLFCIIGWLIYAGAAAMEYR-----WQW------YRVGPFFYRMIDGEFIPG 83

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + T  LA    I + +IG L   GR+S +     I   Y+E+ RN P LV +F 
Sbjct: 84  PLFKGIIVTLQLAGISSILSIVIGALTAIGRMSNSIAGRSIASTYLEIIRNTPLLVQLFM 143

Query: 148 LYKSV 152
            Y  +
Sbjct: 144 FYFVL 148


>gi|257125933|ref|YP_003164047.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049872|gb|ACV39056.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 218

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 +FS  LGI+ +L  T  ++              + T++  G P ++ + + Y  
Sbjct: 21  LYVFTILFSIPLGILGALAYTGKNKIIKFIIS-------VYTWVFRGTPLMLQLMVVYY- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +   NF G   V   + +  I      AA++ EI+RSG+ ++ +GQ E A  LG
Sbjct: 73  -----GIPLMNFGGYKIVLAPYTAATITFIINYAAYLVEIMRSGIESIDKGQHEVAKVLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            ++ +    V+LPQA+R ++P L ++ + L+K++SL   +   +++     + N     +
Sbjct: 128 YSYWQKIIYVILPQAIRRVLPTLGNEAITLIKDTSLVYVLAVTEVMKRTKELANIYYN-V 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +  + IYL LS  +      +  +  ++
Sbjct: 187 TPYICAIIIYLVLSFAVDRLFKSIEKRNKIR 217


>gi|226938963|ref|YP_002794034.1| Polar amino acid ABC transporter, inner membrane subunit
           [Laribacter hongkongensis HLHK9]
 gi|226713887|gb|ACO73025.1| Polar amino acid ABC transporter, inner membrane subunit
           [Laribacter hongkongensis HLHK9]
          Length = 219

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 108/232 (46%), Gaps = 13/232 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F M        F    +  + ++ +F+  +GI        ++R    K        Y+
Sbjct: 1   MQFDMSAVTGSFDFLMKGLQYSLQLTLFATAIGIFFGTLL-AMARLSSIKPLNLAASTYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F         L+ + +  +   P++   +            S YI  + + AA+  EI
Sbjct: 60  NLFRSVP-----LLLVIFWFYILVPLVMGIDVGAEK-------SAYITFAIFEAAYFCEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ ++PRGQ+ A  A+G T+ +  R V+LPQA R+++P L +Q + L +++SL   V
Sbjct: 108 IRAGIQSIPRGQVFAGQAMGFTYGQNMRYVILPQAFRNVVPLLLTQIIILFQDTSLVYVV 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  DL+     + N+    +E+ +    IY  +S  ++  + RL+ +IA+  
Sbjct: 168 GATDLLGAASKVANRDNTLVEMYVAVAVIYFVISFTLSRLVKRLHTRIAIVR 219



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 2/153 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   +  L           GTL+   RLS+ K +      YV +FR++P L+VIF+ 
Sbjct: 15  LMKGLQYSLQLTLFATAIGIFFGTLLAMARLSSIKPLNLAASTYVNLFRSVPLLLVIFWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  V  V+ I   +    +  F       F  +       I       G  +     +  
Sbjct: 75  YILVPLVMGIDVGAEKSAYITFAIFEAAYFCEIIRAGIQSIPRGQVFAGQAMGFTYGQNM 134

Query: 209 RH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           R+    +     +PLL     ++F   +LV + 
Sbjct: 135 RYVILPQAFRNVVPLLLTQIIILFQDTSLVYVV 167


>gi|226938962|ref|YP_002794033.1| GltJ [Laribacter hongkongensis HLHK9]
 gi|226713886|gb|ACO73024.1| GltJ [Laribacter hongkongensis HLHK9]
          Length = 248

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 114/227 (50%), Gaps = 9/227 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     LS    T+ T    ++ + V+G ++ +      R    K    L   Y+  F  
Sbjct: 21  FYYQWLLSGLGWTIATALCAWIIALVIGTLVGV-----GRTVPNKAVSGLTTAYVELF-- 73

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P +V + L + +  +       N++  S   PEF +  IAL  YT+A +AE VR+G+
Sbjct: 74  RNVPLIVQMFLWFFVFPEFLPETASNWVKQSMPLPEFSTAVIALGFYTSARVAEQVRTGI 133

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           + + RGQ  A +ALGLT  +  R V+LP A R I+PPLTS+++N+ KNS++A+A+G  +L
Sbjct: 134 LTLSRGQKNAGLALGLTLGQTYRYVMLPMAFRIIVPPLTSEFMNIFKNSAVALAIGLTEL 193

Query: 350 VSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 +  +      IE++     +YL ++  +   M  +  K+ +
Sbjct: 194 TFQMRQMTGEYAPANPIEVMTYTSLLYLIVAFSVNRIMALVEKKVQV 240



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 40/80 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T   A    I A +IGTLVG GR   NK V+ +   YVE+FRN+P +V 
Sbjct: 22  YYQWLLSGLGWTIATALCAWIIALVIGTLVGVGRTVPNKAVSGLTTAYVELFRNVPLIVQ 81

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +F  +      LP    + V
Sbjct: 82  MFLWFFVFPEFLPETASNWV 101


>gi|217032729|ref|ZP_03438213.1| hypothetical protein HPB128_158g8 [Helicobacter pylori B128]
 gi|298736105|ref|YP_003728630.1| putative polar amino acid transport system permease protein
           [Helicobacter pylori B8]
 gi|216945545|gb|EEC24200.1| hypothetical protein HPB128_158g8 [Helicobacter pylori B128]
 gi|298355294|emb|CBI66166.1| putative polar amino acid transport system permease protein
           [Helicobacter pylori B8]
          Length = 237

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L      +HF  K        Y+S  +I G P LV I + + 
Sbjct: 41  PLAVTSFILGLFIAVFVALIKIAPPKHFVHKALLTGVNFYVS--IIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|91784299|ref|YP_559505.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|91688253|gb|ABE31453.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 218

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 18/223 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++     FV S  LG+VL+L      R    +        +I+  +I GLP +
Sbjct: 14  LKGAVVTIEITFCSFVLSTALGLVLALM-----RVSGNRVVSNAAATFIN--VIRGLPII 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + ++F  P L              F +  I L    + + AE  R+G+ A+  G
Sbjct: 67  VQL---FYIYFVLPDL--------GVQLSAFQAGSIGLGVAYSVYQAENFRAGIQAIDHG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA ++G+      R V+LPQA R  +P   +  + +LK+SSLA  +  A++   G  
Sbjct: 116 QIEAAQSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQL 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I + T Q + +  +   +YL LS+ +   + R+  ++ LK K+
Sbjct: 176 IASSTFQNMTVFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR 218



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 44/110 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +   +   +L G V T  + F   + +T +G ++   R+S N++V+     ++ V R 
Sbjct: 3   FQNAIEFLPILLKGAVVTIEITFCSFVLSTALGLVLALMRVSGNRVVSNAAATFINVIRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +P +V +F++Y  +  +            G+ +               A 
Sbjct: 63  LPIIVQLFYIYFVLPDLGVQLSAFQAGSIGLGVAYSVYQAENFRAGIQAI 112


>gi|17546824|ref|NP_520226.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17429124|emb|CAD15812.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 217

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 14/200 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG    L     +R       + +  +YI  F     P L+ + L +          
Sbjct: 28  AFALGGAAGLAVL-FARVGRNAGLQRVSQVYIQIF--QNTPLLMQMFLVF---------- 74

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F           + +  I L+ YT+A++AE+ R  + A+PRGQ EA+ +L + + +  R
Sbjct: 75  -FGASMAGLEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASASLAMGYFQQMR 133

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + N T Q   I  +   
Sbjct: 134 HVVLPQAVRMSIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSVLANATFQPFLIYGLVGM 193

Query: 373 IYLSLSIMIALFMNRLNAKI 392
            YL+L   ++L  + L  K+
Sbjct: 194 AYLALCWPLSLCASHLEKKL 213


>gi|167770581|ref|ZP_02442634.1| hypothetical protein ANACOL_01927 [Anaerotruncus colihominis DSM
           17241]
 gi|167667176|gb|EDS11306.1| hypothetical protein ANACOL_01927 [Anaerotruncus colihominis DSM
           17241]
          Length = 218

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 14/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     + +    L      +     +   S  LG +L+L A            +  PL 
Sbjct: 1   MTWSEIVTITKAILQGLGPVLILFFVVMAASMPLGFLLTLVAR----------CRFAPLR 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I    I+ +    L+   + +++  P +  F     + +    +   +  S   AA+ A
Sbjct: 51  WIVNAYIYVMRGTPLMLQLFFIYYGLPFVSDFFK---AALQSAMVCALLGFSLNYAAYFA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL+A+ RGQ EA   LGL+  + T  V+LPQ +R  +P +T++ + L+K+++L  
Sbjct: 108 EIFRGGLLAIDRGQYEACQVLGLSRVQTTVRVILPQMIRVALPSITNESITLIKDTALVF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++   +++      + +TG      +I   IYL L+ ++ +F   L  K A
Sbjct: 168 SIAVLEILYYAKAAVTRTGNVFP-YVIAFVIYLLLNTVLQMFFKWLEKKTA 217



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 29/70 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +   AIL G      L F  M  +  +G L+          + WI   Y+ V R  P ++
Sbjct: 8   TITKAILQGLGPVLILFFVVMAASMPLGFLLTLVARCRFAPLRWIVNAYIYVMRGTPLML 67

Query: 144 VIFFLYKSVL 153
            +FF+Y  + 
Sbjct: 68  QLFFIYYGLP 77


>gi|27377336|ref|NP_768865.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27350480|dbj|BAC47490.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 217

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 14/221 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + S +L  VL L    + R    K    L     S  LI  +  
Sbjct: 11  FFPILMSGVALTIVVTIGSLLLSTVLGLI-WAMMRVSGIKVLSML-----SASLINVIRG 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + +I L + L+F  P L                +  + L    +A+ AE  R+G+ A+ +
Sbjct: 65  IPIIVLLFYLYFVMPDL--------GVTLSALQAAILGLGIAYSAYQAENFRAGIEAIDK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA ++G+      R V+LPQA+R ++PP  +  + +LK+SS A  +  A+L   G 
Sbjct: 117 GQIEAAQSIGMGWWLTMRRVVLPQAVRIVLPPYGNVMIMMLKDSSQASTITVAELALQGK 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            I + T +   +  +   +YL++SI + L +     +   K
Sbjct: 177 LIASSTFKNTSVFTLVALMYLTMSIPLILLVRHFEKRAGKK 217



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 40/100 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +    ++ +T++G +    R+S  K+++ +    + V R IP +V++F+L
Sbjct: 15  LMSGVALTIVVTIGSLLLSTVLGLIWAMMRVSGIKVLSMLSASLINVIRGIPIIVLLFYL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +  +            G+ +               A 
Sbjct: 75  YFVMPDLGVTLSALQAAILGLGIAYSAYQAENFRAGIEAI 114


>gi|121606946|ref|YP_984275.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120595915|gb|ABM39354.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 216

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +    L +     + + +F  G ++ L    ++R            LY+  F  
Sbjct: 4   FSLWDIVRNLLLALRWTVALSLIAFAGGGIVGLVLL-IARLSKLPGAARCVALYVQVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y           F        +    +  + L+ Y +A++ EI R  +
Sbjct: 61  QGTPLLMQLFLTY-----------FGLSMLGIDTSALFAASVCLTLYASAYLTEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++PRGQ EAA +L +   +  R ++LPQA R  I P     + ++K ++LA  +GF ++
Sbjct: 110 LSIPRGQWEAAASLAMNFGEQLRHIVLPQAARIAIGPTVGFLIQIIKGTALASVIGFVEI 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G  I N T +   +      +Y +L   ++++   L  K++ + 
Sbjct: 170 TKAGQMIANATYEPFLVYGCVGLMYFALCFPLSVWSRNLERKLSPRR 216



 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 32/103 (31%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+        I+G ++   RLS     A    +YV+VF+  P L
Sbjct: 7   WDIVRNLLLALRWTVALSLIAFAGGGIVGLVLLIARLSKLPGAARCVALYVQVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
           + +F  Y  +  +             + L              
Sbjct: 67  MQLFLTYFGLSMLGIDTSALFAASVCLTLYASAYLTEIWRGCV 109


>gi|222102596|ref|YP_002539635.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
 gi|221739197|gb|ACM39930.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
          Length = 230

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 8/237 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            I   F   +  + LS   LT+       V  FVL +VL+L      R            
Sbjct: 1   MIDFGFFFEIIPKLLSGLPLTLTLAGTSIVCGFVLALVLALVQQGERRWVVWPV------ 54

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                 +  G P LV I L Y          Q   +      P +    +AL+  TAA+ 
Sbjct: 55  -RTFVAVFRGTPLLVQIFLIYYGLGQFRPSLQAAGLWWLFREP-YWCAILALTLNTAAYG 112

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R  +  VPRG +EAA ALG++     R ++LP A+R  IP   ++ + ++K +SLA
Sbjct: 113 SEILRGAIRNVPRGLIEAASALGMSRLANLRFIILPLALRQAIPAYGNEIILMVKGTSLA 172

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   ++  +   +I+Q+ +AIE+ +    IYL L+ +I   +  L A++ L   +
Sbjct: 173 SIITLMEVTGIAQGLISQSYRAIEVFMAAGAIYLLLNFIIVRALTTLEARLTLYRTR 229



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA + ++   ++  ++   +    + V W  R +V VFR  P LV IF +
Sbjct: 14  LLSGLPLTLTLAGTSIVCGFVLALVLALVQQGERRWVVWPVRTFVAVFRGTPLLVQIFLI 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +    P    + +         
Sbjct: 74  YYGLGQFRPSLQAAGLWWLFREPYW 98


>gi|168752392|ref|ZP_02777414.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758502|ref|ZP_02783509.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4401]
 gi|168769136|ref|ZP_02794143.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4486]
 gi|168783841|ref|ZP_02808848.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4076]
 gi|187776437|ref|ZP_02802695.2| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4196]
 gi|195940014|ref|ZP_03085396.1| putative transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807701|ref|ZP_03250038.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814609|ref|ZP_03255938.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4045]
 gi|208819421|ref|ZP_03259741.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4042]
 gi|209398401|ref|YP_002272732.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4115]
 gi|254795212|ref|YP_003080049.1| putative amino-acid ABC transporter membrane protein [Escherichia
           coli O157:H7 str. TW14359]
 gi|187767132|gb|EDU30976.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013749|gb|EDU51871.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4113]
 gi|188998879|gb|EDU67865.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354675|gb|EDU73094.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4401]
 gi|189361796|gb|EDU80215.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4486]
 gi|208727502|gb|EDZ77103.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735886|gb|EDZ84573.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4045]
 gi|208739544|gb|EDZ87226.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4042]
 gi|209159801|gb|ACI37234.1| general L-amino acid transport system permease protein AapM
           [Escherichia coli O157:H7 str. EC4115]
 gi|254594612|gb|ACT73973.1| predicted amino-acid transporter subunit, membrane component of ABC
           superfamily [Escherichia coli O157:H7 str. TW14359]
          Length = 362

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 74/327 (22%), Positives = 133/327 (40%), Gaps = 54/327 (16%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+L+G V+         I       L   GR  
Sbjct: 77  WVFIHERFG-QFMYGLYPHDQRWRINLALLIGLVS---------IAPMFWKILPHRGR-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  I PL+V + +Y    ++  +                     T
Sbjct: 125 -----------YIAVWAVIYPLIVWWLMYGGFFALERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R  H    + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSHMPIVRILSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTSIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALF 384
              G + E  +    IY      ++ +
Sbjct: 326 AWLGMSTEGYVFAALIYWIFCFSMSRY 352


>gi|91205978|ref|YP_538333.1| amino acid ABC transporter permease [Rickettsia bellii RML369-C]
 gi|122425299|sp|Q1RHC0|GLNP_RICBR RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|91069522|gb|ABE05244.1| Amino acid ABC transporter permease protein [Rickettsia bellii
           RML369-C]
          Length = 218

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +   +  + F         K  V + + G+V+ +    L +    +  +     Y 
Sbjct: 1   MFEYLIKFSPKILFIVEGTLITLKYSVIAVIFGLVIGVLL-ALCKVNKNRALRLFADFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ +++ Y   F  P L    F         FM+  I+ S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLSIIY---FASPYLIGIKF-------TVFMAGAISFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EAA AL +      + ++LPQA+++I P LT++ +NL+K S++    
Sbjct: 108 IRAGINAVDKGQFEAAEALAIPKFLIMKDIILPQAIKNIFPSLTNELINLIKESAIISMF 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      +++    Y  L ++I+     +  K+
Sbjct: 168 GEMDLMKRAQIVSLETYNYFFPMIVAACCYYILVMLISFIARIIEKKL 215



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N+ +      Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLITLKYSVIAVIFGLVIGVLLALCKVNKNRALRLFADFYTSIFRGTPLLIQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|116751368|ref|YP_848055.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116700432|gb|ABK19620.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 221

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 17/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                FG+  +   L    L +     +  F+  L I +++   R       K+ +   +
Sbjct: 1   MEEFRFGILHDAAPLILEGLRVTVYVSLLSFALALVIGVAVGILR------SKSPRMRAV 54

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                 L  G P L+ +   Y                       F +  + L     A+I
Sbjct: 55  FSPYVELFRGTPLLIQLFFIYY-----------GLPTMGLTLDSFSAGVLGLGLNGGAYI 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R  L++V +GQ +AA + G +  ++   V+LPQA+   +PPL S +  LLK SSL 
Sbjct: 104 SEIIRGALLSVDKGQQDAAFSFGFSWLQSMTYVILPQAVSVALPPLVSSFSALLKESSLV 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   +L  V   I  +T +A+E+ L    +Y  ++  +A    RL  K  +  +
Sbjct: 164 SVLAITELTRVSQLIYTRTFRALEVYLAIGVLYFLMTWFVARLSKRLERKYRVSGR 219



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +++      A +IG  VG  R S +  +  +   YVE+FR  P L+ +FF+
Sbjct: 16  ILEGLRVTVYVSLLSFALALVIGVAVGILR-SKSPRMRAVFSPYVELFRGTPLLIQLFFI 74

Query: 149 YKSVL 153
           Y  + 
Sbjct: 75  YYGLP 79


>gi|239502916|ref|ZP_04662226.1| ABC-type arginine transport system, permease component
           [Acinetobacter baumannii AB900]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 9/224 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S ++G++ +      S+  + K  + +   Y  T LI  +P L
Sbjct: 11  LSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSNIKALRYIATAY--TTLIRSVPDL 63

Query: 236 VLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V++ L +  L      + +   +    ++P F++  I L+    A+  E  R    +VPR
Sbjct: 64  VIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA+A G+   +    VL PQ MR  +P + + +  L+K ++L   +G  D+V +  
Sbjct: 123 GQIEAAMAYGMKPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQ 182

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                T Q     ++   IYL+++ +  L +  L    +   +K
Sbjct: 183 DAGRSTMQLFFFSIVAAAIYLAITTVSNLILIWLERHYSAGVRK 226


>gi|291619133|ref|YP_003521875.1| YhdY [Pantoea ananatis LMG 20103]
 gi|291154163|gb|ADD78747.1| YhdY [Pantoea ananatis LMG 20103]
          Length = 366

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 132/340 (38%), Gaps = 54/340 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P+        A+++G  +         I    I  L   GR  
Sbjct: 76  WVFIHARFG-QFMYGLYPHELRWRINLALVIGLAS---------IVPMFIKRLPYRGR-- 123

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +    PLVV F LY   L +  +                     T
Sbjct: 124 -----------YIAAWAVCYPLVVWFLLYGGFLGLDRVETRQ-------------WGGLT 159

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 160 LTLIIASVGIAGALPLGILLAL-----GRRSRMPVVRTLSVIFIEFWRGVPLITVLFMS- 213

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 214 ---------SVMLPLFMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 264

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++  IP L +  + L K++SL + +G  DL S         
Sbjct: 265 ESLALGYWKTQMLVILPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 324

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G + E  +    +Y      ++ +   L  +     K
Sbjct: 325 AWLGMSTEGYVFAALVYWIFCFSMSRYSQYLEKRFHTGRK 364


>gi|262278400|ref|ZP_06056185.1| amino acid ABC transporter permease [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258751|gb|EEY77484.1| amino acid ABC transporter permease [Acinetobacter calcoaceticus
           RUH2202]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 9/234 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        LS   +T+       + S ++G++ +      S+    K  + +   Y  
Sbjct: 1   MFLSGYGPLLLSGTWMTLQLALLSLLLSVIIGLIGA-----SSKLSSFKALRYIATTY-- 53

Query: 226 TFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI  +P LV++ L +  L      + +   +    ++P F++  I L+    A+  E 
Sbjct: 54  TTLIRSVPDLVIMLLLFYSLQLGLNQITESLQMDQIDINP-FVAGVITLAFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R    +VP GQ+EAA+A G+T  +  R VL PQ MR  +P + + +  L+K ++L   +
Sbjct: 113 FRGAFQSVPTGQIEAAMAYGMTPWQVFRRVLFPQMMRFALPGIGNNWQVLIKATALVSII 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D+V +       T Q     ++   IYL+++ +  L +  L  + +   +K
Sbjct: 173 GLTDIVKITQDAGRSTMQLFFFSIVAAAIYLAITTVSNLILMWLERRYSAGVRK 226


>gi|213968637|ref|ZP_03396779.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301385504|ref|ZP_07233922.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302059836|ref|ZP_07251377.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132497|ref|ZP_07258487.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213926570|gb|EEB60123.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVVRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + +   +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSAGVR 225



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|54309894|ref|YP_130914.1| putative ABC-type arginine transport system, permease component
           [Photobacterium profundum SS9]
 gi|46914333|emb|CAG21112.1| putative ABC-type arginine transport system, permease component
           [Photobacterium profundum SS9]
          Length = 246

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 95/241 (39%), Gaps = 23/241 (9%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                      ++ + S +  ++L      L++    +  +A+  +Y  T +I G+P L+
Sbjct: 9   WALAEGAWVTVQVALLSLLFAVILG-MLGALAKLSPYRWARAIATIY--TTVIRGIPDLI 65

Query: 237 LIALKYQLHFDK--------------------PVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           L+ L +                          P      ++        F++  + +   
Sbjct: 66  LMMLIFFGGQMLLNDSLYRINEWFNEYFTSSDPTHEWTAYLPDYIEISPFVAGVVTIGFI 125

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AE  R  +++V +G++EA  A G++  K+   +LLPQ +R  +P   + +L LLK
Sbjct: 126 FGAYMAETFRGAILSVDKGELEAGKAYGMSGFKSFHRILLPQMIRHALPGFGNNWLVLLK 185

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++L   +G  D+V  G      T       +    ++L  + +    +     + ++  
Sbjct: 186 TTALVSIIGLDDMVRKGSLAAGATQMPFTFYMTIAVVFLLFTTLSTSALKWAERRFSIHT 245

Query: 397 K 397
           +
Sbjct: 246 R 246



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A+  G   T  +A   ++ A I+G L    +LS  +    I  +Y  V R IP L++
Sbjct: 7   YEWALAEGAWVTVQVALLSLLFAVILGMLGALAKLSPYRWARAIATIYTTVIRGIPDLIL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL--------NNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++     +L    + I   F  +             L          A +    F+ 
Sbjct: 67  MMLIFFGGQMLLNDSLYRINEWFNEYFTSSDPTHEWTAYLPDYIEISPFVAGVVTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|330891010|gb|EGH23671.1| glutamine ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 233

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +          +   + + L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYH-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   +  +  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLTIS 213



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTLQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLTESTQLWLANYS 98


>gi|327190179|gb|EGE57284.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 271

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 2/195 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R    F+ +  + +P+L +  ++ F     ++ A  + +    P       +     
Sbjct: 79  IVLRQIARFYIEIIRGIPILVLLFYVAFVGAPGLVAAYNFIISPLVPAGIAEPIL--VRD 136

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                   IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R 
Sbjct: 137 LSLMWRAIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRV 196

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I PPL++ +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++
Sbjct: 197 IFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLS 256

Query: 383 LFMNRLNAKIALKEK 397
           L + R+  K+  K +
Sbjct: 257 LALRRIERKMKQKPR 271



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 34/67 (50%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T ++     + AT++G  +    L+ + ++  I R Y+E+ R IP LV++
Sbjct: 42  FRTLVNGAGITVFVTLVAFVLATVLGLGIALLGLADSIVLRQIARFYIEIIRGIPILVLL 101

Query: 146 FFLYKSV 152
           F++    
Sbjct: 102 FYVAFVG 108


>gi|295400875|ref|ZP_06810851.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977138|gb|EFG52740.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 216

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   ++  +  L L+ + +  +F  P +             +F +  +AL  + +A ++E
Sbjct: 54  IFAVIVETIRNLPLLLIIFFTYFALPEV--------GLKLDKFYAAIVALVVFESAMLSE 105

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVR GL ++ +GQ+EAA + GLT+ +    ++LPQA+R ++PP+ SQ+++LLK++SLA+ 
Sbjct: 106 IVRGGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIV 165

Query: 344 VGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +L++    I  +     I I ++   +Y  ++  ++L   RL  K
Sbjct: 166 IALPELMNHAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYK 214


>gi|229083879|ref|ZP_04216188.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-44]
 gi|228699457|gb|EEL52133.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-44]
          Length = 214

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 19/206 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + SF++G V+           + K      LL +   +I  LP L++I   Y    
Sbjct: 27  VIAILLSFIIGSVVGTL-------RYTKIPVVSQLLALIVEIIRNLPLLLIIFFTY---- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F             +  +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL+
Sbjct: 76  -------FALPEAGLKLEITTAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IE 365
           + +    ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     I  Q     I 
Sbjct: 129 YAQTLWYIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIINGQNVNYMIP 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
            +L+   +Y  ++  ++L   +L ++
Sbjct: 189 TLLLVACMYFVVNYSLSLVSRKLESR 214



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 36/60 (60%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A   ++ + IIG++VG  R +   +V+ +  + VE+ RN+P L++IFF Y ++   
Sbjct: 22  TLEIAVIAILLSFIIGSVVGTLRYTKIPVVSQLLALIVEIIRNLPLLLIIFFTYFALPEA 81


>gi|157825310|ref|YP_001493030.1| amino acid ABC transporter permease protein [Rickettsia akari str.
           Hartford]
 gi|157799268|gb|ABV74522.1| amino acid ABC transporter permease protein [Rickettsia akari str.
           Hartford]
          Length = 218

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      + F         K  + + +LG+V+ +    + +    +  +     Y 
Sbjct: 1   MFEYLIKFYPKILFIVEGTLVTLKYSIIAVILGLVIGMLL-AICKVNKNRALRLCANFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ + + Y   F  P +    F         FM+  IA S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLTIIY---FASPYIIGVKF-------SVFMAGAIAFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EAA AL +      + ++LPQA+++I P L ++ +NL+K S++   +
Sbjct: 108 IRAGINAVDKGQFEAAEALAIPKFLIMKDIILPQAVKNIFPSLVNELVNLIKESAIISML 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      + I    Y  L ++I+     +  K+
Sbjct: 168 GEMDLMRRAQIVSIETYNYFFPMSIAACCYYILVMLISFIAKIIEKKM 215



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N+ +      Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLVTLKYSIIAVILGLVIGMLLAICKVNKNRALRLCANFYTSIFRGTPLLIQLTII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|302189023|ref|ZP_07265696.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 229

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 4/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              D    +               M+    L     A+++E  R   +A+P+GQ EA +A
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDPLMAGIFTLGFIFGAYLSETFRGAFMAIPKGQAEAGMA 130

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T +
Sbjct: 131 YGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATRE 190

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                L    +YL ++ +  L +  L  + ++  +
Sbjct: 191 PFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 11/117 (9%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           I  ++     +L      +     + L+              A IF   F+ G  LS
Sbjct: 65  ILLIFYGGQDLLNRVAPLLGFDDYIDLDP-----------LMAGIFTLGFIFGAYLS 110


>gi|289646274|ref|ZP_06477617.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 233

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +          +   + + L L + RL+ + + +   A  + Y        +
Sbjct: 15  YAELIVKGIETTLQLAFVAWCMAMEVALLLVSIRLTGNKYAERLVAGYVSYH-----RNV 69

Query: 233 PTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           PTLV + L Y   F  P +L +   +  +  S E++   IAL    AA+ +E +RSGL A
Sbjct: 70  PTLVQLMLWY---FGIPTLLTESTQLWLANYSTEYLFSVIALGLCQAAYFSEDIRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+EA+ ALGL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L  
Sbjct: 127 IPAGQVEASRALGLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTY 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLS 378
               + N T +  E  L+   +YL++S
Sbjct: 187 ATREVENYTFRTFEAYLVATVVYLAIS 213



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAELIVKGIETTLQLAFVAWCMAMEVALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLTESTQLWLANYS 98


>gi|154246381|ref|YP_001417339.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154160466|gb|ABS67682.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 219

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 18/232 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG+      L     T+       V   + G +++L  T  +       G       +  
Sbjct: 6   FGLNEFYFLLESLQWTLALTGLAMVGGGIAGFLVALMRTARTSALRIAAG-------VYI 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G+P L+++ L Y                     P  ++  +++S Y + ++ EI R
Sbjct: 59  QVVQGIPVLMILFLSYY-----------GLSLAGYQLPAIVAAGLSMSIYASGYLGEIWR 107

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + AVP+ Q E+  +L LT  +    ++LPQA+R  +PP     + L+KN+S+A  +GF
Sbjct: 108 GCIQAVPKPQWESGESLALTIPQQYLYIILPQAIRISLPPTVGFLVQLVKNTSIAALIGF 167

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +L   G  I N T Q   + L    +Y  +   ++     L  ++ +  + 
Sbjct: 168 VELTRAGQLINNATFQPFRVFLTVAALYFVICYPMSQLSRWLERRLHVGSRH 219



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 33/99 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L    M+   I G LV   R +    +     VY++V + IP L+++F  
Sbjct: 14  LLESLQWTLALTGLAMVGGGIAGFLVALMRTARTSALRIAAGVYIQVVQGIPVLMILFLS 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +          +     M +   G           A
Sbjct: 74  YYGLSLAGYQLPAIVAAGLSMSIYASGYLGEIWRGCIQA 112


>gi|254229000|ref|ZP_04922421.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio sp. Ex25]
 gi|262394741|ref|YP_003286595.1| histidine ABC transporter permease HisM [Vibrio sp. Ex25]
 gi|151938468|gb|EDN57305.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio sp. Ex25]
 gi|262338335|gb|ACY52130.1| histidine ABC transporter permease protein HisM [Vibrio sp. Ex25]
          Length = 225

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   + V+G+ +S+    ++R+            +I  F   G P L
Sbjct: 10  FPTYLQGLWTTVWLVGLALVIGLCVSIPL-AVARNSTNYAFSLPSWGFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ MI         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFMILWCFKVAEKRF 217



 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 34/102 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++    +   +   R S N   +     ++  FR  P LV ++ +
Sbjct: 13  YLQGLWTTVWLVGLALVIGLCVSIPLAVARNSTNYAFSLPSWGFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|323525228|ref|YP_004227381.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382230|gb|ADX54321.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 229

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 75/175 (42%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T L+ G+P LVL+ L +                       F++    L     A+  E
Sbjct: 52  VYTTLVRGVPDLVLMLLLFYSIQIWLNNLTDMLGWDQIDIDPFVAGVAVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  ++K ++L   
Sbjct: 112 TFRGAFLAVPRGQLEAGAAYGMTSWQVFSRIMFPQMMRFALPGIGNNWQVMVKATALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     L+   IYL ++ +    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLLAGAIYLVITTVSNFVLMYLEKRYSTGVRK 226


>gi|91228351|ref|ZP_01262279.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus
           12G01]
 gi|262392785|ref|YP_003284639.1| amino acid ABC transporter permease [Vibrio sp. Ex25]
 gi|269965280|ref|ZP_06179401.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus
           40B]
 gi|91188111|gb|EAS74415.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus
           12G01]
 gi|262336379|gb|ACY50174.1| amino acid ABC transporter permease protein [Vibrio sp. Ex25]
 gi|269830081|gb|EEZ84309.1| amino acid ABC transproter, permease protein [Vibrio alginolyticus
           40B]
          Length = 223

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMATWGLVFSLILSVILANI-----RVFKLPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P++   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQIFPLMVGID---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++        AK+
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRVQIWAEAKL 217



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLVFSLILSVILANIRVFKLPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  + P
Sbjct: 75  YYGLPQIFP 83


>gi|330887727|gb|EGH20388.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 365

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGIAFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|320157819|ref|YP_004190198.1| amino acid ABC transporterpermease [Vibrio vulnificus MO6-24/O]
 gi|319933131|gb|ADV87995.1| amino acid ABC transporter, permease protein [Vibrio vulnificus
           MO6-24/O]
          Length = 223

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+      VFS VL ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMAILGLVFSLVLAVILANI-----RVFRLPILDPLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P++   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQIFPIMVGLD---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRSQMEASLSVGMTTTQAMRRIILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++         K+
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVLVLTRVQIWAENKL 217



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 35/71 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G++ + ++  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMAILGLVFSLVLAVILANIRVFRLPILDPLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  + PI 
Sbjct: 75  YYGLPQIFPIM 85


>gi|310287214|ref|YP_003938472.1| Glutamate transport system permease protein GluD [Bifidobacterium
           bifidum S17]
 gi|311064074|ref|YP_003970799.1| glutamate transport system permease GluD [Bifidobacterium bifidum
           PRL2010]
 gi|309251150|gb|ADO52898.1| Glutamate transport system permease protein GluD [Bifidobacterium
           bifidum S17]
 gi|310866393|gb|ADP35762.1| GluD Glutamate transport system permease protein [Bifidobacterium
           bifidum PRL2010]
          Length = 362

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 120/274 (43%), Gaps = 21/274 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V W+  +   +F  +  L+++              +            +  L    +
Sbjct: 21  IRIVNWVAAL---IFVGVLVLILMRLHNPPDGENQLSWELWKPALEREAWTDFYLPGLWM 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+  +    V S V G+V  +      R       +A+  + +       +  L++   +
Sbjct: 78  TVKASIVAVVGSVVFGLVFGV-----GRLLPNVVLRAISSVVVEFCRAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +           F F G S+  P + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 W-----------FAFAGLSS--PSYWAVVLALVLYNGSVVAELVRSGVGNLPNGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTETQSLMQIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +++   +Y  +  +++     L +++  +
Sbjct: 240 NILQTLVVAAVVYFIVCWLLSRLAEWLPSRMQQR 273



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T   +   ++ + + G + G GRL  N ++  I  V V
Sbjct: 56  ELWKPALEREAWTDFYLPGLWMTVKASIVAVVGSVVFGLVFGVGRLLPNVVLRAISSVVV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + L  P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLSSPSYWAVVLALVLYN 155


>gi|148826212|ref|YP_001290965.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittEE]
 gi|229846209|ref|ZP_04466321.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           7P49H1]
 gi|148716372|gb|ABQ98582.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittEE]
 gi|229811213|gb|EEP46930.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           7P49H1]
          Length = 221

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F     A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVFA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIQKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|62390793|ref|YP_226195.1| glutamate permease [Corynebacterium glutamicum ATCC 13032]
 gi|41326131|emb|CAF20294.1| GLUTAMATE PERMEASE [Corynebacterium glutamicum ATCC 13032]
          Length = 315

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 15/258 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
             ++ +       +     +               L     T+ +     + + V+G  L
Sbjct: 34  LALLFWIGSMLSGNGQLDANKWTPFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTAL 93

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L      R    +  +    + I TF    +P L+L+   YQ+        Q+N +  S
Sbjct: 94  GL-----GRISEIRILRWFCAVIIETF--RAIPVLILMIFAYQMF------AQYNIVPSS 140

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F ++   L+ Y  + IAEI+RSG+ ++P+GQ EAAIALG++ R+ T  +LLPQA+
Sbjct: 141 QL--AFAAVVFGLTMYNGSVIAEILRSGIASLPKGQKEAAIALGMSSRQTTWSILLPQAV 198

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            +++P L SQ +  LK+S+L   +G+ ++V  G    +     +  + +   I + L+  
Sbjct: 199 AAMLPALISQMVIALKDSALGYQIGYIEVVRSGIQSASVNRNYLAALFVVALIMIVLNFS 258

Query: 381 IALFMNRLNAKIALKEKK 398
           +    +R+  ++     +
Sbjct: 259 LTALASRIERQLRAGRAR 276



 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R  N+ + I+  +L   +  W  + +  N +                
Sbjct: 6   RATVLYDAPGPKGRRFNLIITILTVVLGLALLFWIGSMLSGNGQLD-------------- 51

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
                   P+ +  ++ T IL G   T   A   +I A ++GT +G GR+S  +++ W C
Sbjct: 52  ---ANKWTPFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFC 108

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            V +E FR IP L+++ F Y+       +P   +     +F
Sbjct: 109 AVIIETFRAIPVLILMIFAYQMFAQYNIVPSSQLAFAAVVF 149


>gi|134288195|ref|YP_001110358.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134132845|gb|ABO59555.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 229

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 2/191 (1%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           S+    +  + L   Y  T LI  +P LV++ L +                       F+
Sbjct: 38  SKLSSSRILRHLATGY--TTLIRSVPDLVIMLLLFYSLQLGLNKITDALQMDQIDIDPFV 95

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L     A+  E  R    A PRGQ+EAA A G+   +  + V  PQ MR  +P +
Sbjct: 96  AGVVTLGFIYGAYFTETFRGAFQAAPRGQIEAATAYGMRPWQVFKRVQFPQMMRFALPGI 155

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +  L+K ++L   +G +D+V V       T +     ++   IYL+++ +    +  
Sbjct: 156 GNNWQVLIKATALVSIIGLSDIVKVTQDAGKSTMELFYFSVVGAVIYLAITTVSNFVLIW 215

Query: 388 LNAKIALKEKK 398
           L  + ++  +K
Sbjct: 216 LERRYSVGVRK 226


>gi|294338805|emb|CAZ87139.1| Glutamate/aspartate transport system permease protein gltK
           [Thiomonas sp. 3As]
          Length = 228

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 11/234 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L F    +    ++ V + + G +L +    L+R  H K    L   YI+
Sbjct: 3   DFDFGSIVSVLPFLLKGLTYTIQLTVVAAIGGTLLGILL-ALARLSHLKWLSLLAAGYIN 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS---LYIALSCYTAAFIA 282
                 + ++ L+ + +  +F  PV+ Q   I GS   P+  +    Y     + AA+ A
Sbjct: 62  L-----MRSIPLLLVIFWFYFLVPVMLQ--SITGSDYPPKIGAERSAYFTFILFEAAYFA 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ ++P+GQ+ AA ALGLT+ +  RL++LPQA+R+++P L +Q + L ++ SL  
Sbjct: 115 EIVRAGIQSIPKGQLGAAYALGLTYAQTMRLIILPQALRNMLPVLLTQTIVLFQDVSLVA 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   D V     I  +  + +E+  +   +Y  LS +++  + RL+ +IA+  
Sbjct: 175 LLNVTDFVGAAMKIAQRDSRVVEMYTLVAVVYFVLSFLLSQGVKRLHQRIAIVR 228



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L     I  T++G L+   RLS  K ++ +   Y+ + R+IP L+VIF+ 
Sbjct: 16  LLKGLTYTIQLTVVAAIGGTLLGILLALARLSHLKWLSLLAAGYINLMRSIPLLLVIFWF 75

Query: 149 YKSVL 153
           Y  V 
Sbjct: 76  YFLVP 80


>gi|308063766|gb|ADO05653.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           Sat464]
          Length = 240

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + + ++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 44  PLAIISFILGLFIAVFVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKRVEK 237


>gi|146279204|ref|YP_001169362.1| Asp/Glu racemase [Rhodobacter sphaeroides ATCC 17025]
 gi|145557445|gb|ABP72057.1| Asp/Glu racemase [Rhodobacter sphaeroides ATCC 17025]
          Length = 219

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 98/233 (42%), Gaps = 18/233 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   +    L    LT+         +  LG+V ++             G     
Sbjct: 2   EWDWAFVAEIMPVLLQGLQLTLLITLLSAGVAAGLGLVFAIARRSPRAWIARPVG----- 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             +    I G P LV +   + +  D  VL            P  ++  I +  + A + 
Sbjct: 57  --LFVSFIRGTPLLVQLYFIFYVLPDAGVLL-----------PPLVAGVIGMGLHYATYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+G+  VPRGQ EAA A  LT  +  R V++PQA+  +IP L +  + + K + L 
Sbjct: 104 AEVYRAGIENVPRGQWEAARATNLTAAQTWRHVIVPQAIPPMIPALANYLIAMFKETPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+   +L++   ++ N + + +E + +   ++L++S++  + +  L  +   
Sbjct: 164 SAITVLELMNQAKSVANSSYRYVEPMTLVGVLFLAMSLVSVVLLRWLEHRYGR 216


>gi|317401750|gb|EFV82369.1| amino acid ABC transporter permease [Achromobacter xylosoxidans
           C54]
          Length = 218

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +    L       + + +F  G ++   A  + R       + +   YI  F  
Sbjct: 4   FTTWDIVRNLLLAARWTVVLSLVAFAGGALMGGLAL-MMRTSRVALLRRVSWAYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F         P +++   AL+ ++ AF+AEI R  +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLSLAGVEVPPWLAAGAALTLWSGAFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+ +L L + +  R V+LPQA+R  + P     + ++K+++L   +GF +L
Sbjct: 110 EAIPKGQWEASASLALGYVQQMRYVVLPQALRIAVAPTVGFAVQIVKSTALTSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I N T     +      IY +L   ++    RL  K+    +
Sbjct: 170 SKASTVITNATFSPFTVYACAALIYFALCWPLSRLSLRLERKLHAPHR 217



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L+    T  L+        ++G L    R S   L+  +   Y+E+F+  P 
Sbjct: 6   TWDIVRNLLLAARWTVVLSLVAFAGGALMGGLALMMRTSRVALLRRVSWAYIELFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  +          +     + L +             A 
Sbjct: 66  LMQLFLAFFGLSLAGVEVPPWLAAGAALTLWSGAFLAEIWRGCVEAI 112


>gi|302338912|ref|YP_003804118.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636097|gb|ADK81524.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 260

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 19/248 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
            +       +  +      G F     L    +T+  +    +FSF++G +     T L+
Sbjct: 32  VRYDWQWYRVKRYLFTAAEGRFTFGPLLRGLGVTLWISLISLLFSFLIGTL-----TLLA 86

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R         +  LY+S  LI   P L+ +   Y +            I      P   S
Sbjct: 87  RLSEGIVAPVIARLYVS--LIRNTPLLIQLFFIYFV------------IAPVFNIPATPS 132

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS +  A+ +EI+R  + ++ +GQ EAA +LG +       ++LPQA+R+ +P L 
Sbjct: 133 AILALSLFEGAYTSEILRGAIFSISKGQWEAAYSLGFSSGDLYCRIILPQALRTSLPALA 192

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q +N +K+S+L   +   DL   G  II++T    EI      IYL +++ + L ++ +
Sbjct: 193 NQAINTVKDSALVSTIAIYDLTMRGREIISETFLTFEIWFTVAAIYLLITLGLQLCIHLI 252

Query: 389 NAKIALKE 396
           +  +  + 
Sbjct: 253 DRSLNSRR 260



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 39/71 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W++   ++ + +IGTL    RLS   +   I R+YV + RN P L+ +FF+
Sbjct: 58  LLRGLGVTLWISLISLLFSFLIGTLTLLARLSEGIVAPVIARLYVSLIRNTPLLIQLFFI 117

Query: 149 YKSVLSVLPIP 159
           Y  +  V  IP
Sbjct: 118 YFVIAPVFNIP 128


>gi|91780137|ref|YP_555344.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692797|gb|ABE35994.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC
           transporter membrane protein [Burkholderia xenovorans
           LB400]
          Length = 219

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 100/225 (44%), Gaps = 12/225 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
           M  +          +    KI V + +LG +++     +         +A+  +  +   
Sbjct: 1   MEWDWSFAREILPILLQGLKITVLATLLGAIVAAVVGMVFAILRLSPNRAVASITTAVVS 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LV + L + +  D                P   +  +AL  + A + AE+ R+
Sbjct: 61  VIRGTPLLVQLYLVFYVLPDI-----------GVRMPALAAGVLALGVHYATYAAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VPRGQ EAA A  L+  ++ + V+LP+A+  ++P L +  +++ K + L  A+   
Sbjct: 110 GIENVPRGQWEAAKACNLSPAQSWQHVILPEAVPPMLPALANYLISMFKETPLLSAITVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L++    + N   + +E + +   ++L +S++    +  L  + 
Sbjct: 170 ELMNEAKIVANTDYRYLEPMTLVGVLFLCISLIAVFGVRLLERRF 214



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 33/84 (39%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++        +L G   T      G I A ++G +    RLS N+ VA I    V V R
Sbjct: 4   DWSFAREILPILLQGLKITVLATLLGAIVAAVVGMVFAILRLSPNRAVASITTAVVSVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH 161
             P LV ++ ++  +  +      
Sbjct: 64  GTPLLVQLYLVFYVLPDIGVRMPA 87


>gi|289671691|ref|ZP_06492581.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
 gi|330980535|gb|EGH78638.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 246

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPTGQYEASRALGMGYLRTTIWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVEQRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|218510849|ref|ZP_03508727.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli Brasil 5]
          Length = 271

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 2/195 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R    F+ +  + +P+L +  ++ F       +   Y +     V            
Sbjct: 79  IVLRQIARFYIEIIRGIPILVLLFYVAFVGA--PGLVAAYNVIISPLVPAGIAEPILVRD 136

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                   IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R 
Sbjct: 137 LSLMWRAIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRV 196

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I PPL++ +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++
Sbjct: 197 IFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLS 256

Query: 383 LFMNRLNAKIALKEK 397
           L + R+  K+  K +
Sbjct: 257 LALRRIEKKMKQKPR 271


>gi|167899022|ref|ZP_02486423.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei 7894]
          Length = 307

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 31  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 90

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGS 260
           L     S          + L      ++  L    L  L   +    P     F  +  +
Sbjct: 91  LARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFAEVATT 150

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAM
Sbjct: 151 DLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAM 210

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 211 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 270

Query: 381 IALFMNRLNAKIALKEKK 398
           +++   ++  + A    +
Sbjct: 271 LSIVQAQVERRYARGAVR 288


>gi|306823260|ref|ZP_07456636.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Bifidobacterium dentium ATCC 27679]
 gi|309801915|ref|ZP_07696030.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|304553892|gb|EFM41803.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Bifidobacterium dentium ATCC 27679]
 gi|308221471|gb|EFO77768.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 377

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 109/273 (39%), Gaps = 21/273 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V W+  +   VF  +  L+++              +            +  L     
Sbjct: 21  IRIVNWVAGI---VFAIVLVLMLMRLHNPPDGENQLSWELWKPALDSEAWTDFYLPGLWA 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+       + +   G+V  +      R       + +    +       +  L++   +
Sbjct: 78  TVRATILAVIGAVAFGLVFGI-----GRLLPSLIIRTVSGAIVEFARAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTRTQSLMQIEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++ +++   +Y     +++     L  ++  
Sbjct: 240 NILQTLVVAAVVYFIACWLLSRLAEWLPERMQR 272



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       +I A   G + G GRL  + ++  +    V
Sbjct: 56  ELWKPALDSEAWTDFYLPGLWATVRATILAVIGAVAFGLVFGIGRLLPSLIIRTVSGAIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFARAVPVLLLMIFFWRWFAFAGLPSPAYWAVVLALVIYN 155


>gi|260221298|emb|CBA29723.1| Histidine transport system permease protein hisQ [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 228

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 98/215 (45%), Gaps = 4/215 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + + ++ IVL L     ++        AL   Y  T +I G+P LV++ L +  
Sbjct: 14  LTIGVSLCALLVSIVLGLLGAA-AKLSGRPVLVALSTTY--TTVIRGVPDLVVMLLVFYG 70

Query: 245 H-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L + +    +     F++  + +     A++ E  R  ++++P+GQMEAA A 
Sbjct: 71  GTIGLNHLLELSGSKKTVDINPFLAGVLTIGFIYGAYMTETFRGAILSIPKGQMEAAWAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +A   +  PQ +R  +P  T+ +L L+K+++L   +G  ++  +       T   
Sbjct: 131 GMGRIRAFMRITAPQMVRYALPGFTNNWLVLIKSTALVSLIGLKEMTYLSKQASAATRSP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E  L    ++L  + +    + ++NA+ +L  K+
Sbjct: 191 FEFFLFSAALFLIYTSVSLFVLRKVNARYSLGTKR 225



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 35/70 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY  AIL G V T  ++   ++ + ++G L  A +LS   ++  +   Y  V R +P LV
Sbjct: 3   SYYVAILQGSVLTIGVSLCALLVSIVLGLLGAAAKLSGRPVLVALSTTYTTVIRGVPDLV 62

Query: 144 VIFFLYKSVL 153
           V+  ++    
Sbjct: 63  VMLLVFYGGT 72


>gi|239834626|ref|ZP_04682954.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822689|gb|EEQ94258.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 216

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 18/230 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  FG       L     T+  +   F F  + G+V++L      R   ++  + L   
Sbjct: 1   MIRSFGFSEFLFILDGAKWTVILSLLAFTFGGMGGLVVAL-----GRTSAKRWLRYLMAT 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P L+ +   Y   F  P+L              +++L I LS + +AF+ 
Sbjct: 56  YIQIF--QGTPLLIQLFFVY---FGLPIL--------GIRVDIWVALIIGLSLHASAFLG 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + AV  GQ EAA ALG+ +    + V+LPQA R  +P      +NL+K ++LA 
Sbjct: 103 EIWRGSIQAVSTGQDEAARALGIGYFHRMKDVVLPQAFRIGLPATIGFLVNLIKGTALAA 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G  +L   G  + N T + +++      IY  + + +  +  R+  ++
Sbjct: 163 LLGLTELTRSGQLMANITFEPMKVYGTVGLIYFIICVPLTYYSARIEKRL 212



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L+        + G +V  GR SA + + ++   Y+++F+  P L+ +FF+
Sbjct: 13  ILDGAKWTVILSLLAFTFGGMGGLVVALGRTSAKRWLRYLMATYIQIFQGTPLLIQLFFV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +  +    D  + L  G+ L+              A   
Sbjct: 73  YFGLPILGIRVDIWVALIIGLSLHASAFLGEIWRGSIQAVST 114


>gi|222148522|ref|YP_002549479.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735508|gb|ACM36471.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 276

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 97/262 (37%), Gaps = 5/262 (1%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R  P  V+   L      +       ++  +      +        + T   I   S   
Sbjct: 20  RVTPGRVLGGSLLLVWGLLGLGLLAMMIGNWDQEKFVKYGPRFLSGLGTTLSIVAISIAA 79

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G VLS+      R    +   A    Y   ++  G P L  + L Y          +   
Sbjct: 80  GAVLSI-PIAFGRMSKNRLANA--ATYAYVYVFRGTPLLAQVFLVYYGLGGFRAEFEAVG 136

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        +    +ALS  TAA+ AEI+R  + +V RGQ E A +LGL        ++L
Sbjct: 137 LWW-FFRDAWYCGLLALSLNTAAYQAEILRGAIRSVGRGQHEGAASLGLPRTVTFWKIIL 195

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+   + P  ++ + ++K S++   +   D++       ++T    +  L     YL+
Sbjct: 196 PQALIVALRPYGNEIILMVKGSAILSIITVLDMMGETRYAFSRTFDY-QTYLWAAIFYLA 254

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           +  ++      +  ++    K+
Sbjct: 255 IVEILRHGWAAIETRLTRHLKR 276



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 62/215 (28%), Gaps = 13/215 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G   T  +    +    ++   +  GR+S N+L       YV VFR  P L  
Sbjct: 58  YGPRFLSGLGTTLSIVAISIAAGAVLSIPIAFGRMSKNRLANAATYAYVYVFRGTPLLAQ 117

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI------ 198
           +F +Y  +       +   +  F       GL   +L         +   +  +      
Sbjct: 118 VFLVYYGLGGFRAEFEAVGLWWFFRDAWYCGLLALSLNTAAYQAEILRGAIRSVGRGQHE 177

Query: 199 -VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
              SL   R    +     +AL +          L       L      D     ++ F 
Sbjct: 178 GAASLGLPRTVTFWKIILPQALIVALRPYGNEIILMVKGSAILSIITVLDMMGETRYAFS 237

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                     +    L+        EI+R G  A+
Sbjct: 238 RTFDYQTYLWAAIFYLAIV------EILRHGWAAI 266


>gi|167588266|ref|ZP_02380654.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 229

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 68/234 (29%), Positives = 117/234 (50%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L   +      L    +T++  A  FV S VLG+VL+L   ++SR+    T  +  + 
Sbjct: 12  MFLQNALDFLPILLKGAIVTIEITACAFVLSSVLGLVLALL--KVSRNPLVSTAGSTIVN 69

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I GLP +V +   + ++F  P L              F +  + L    +A+ A
Sbjct: 70  -----VIRGLPIIVQL---FYMYFVLPDL--------GVQLSAFQAGVLGLGIAYSAYQA 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ A+ RGQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A 
Sbjct: 114 ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVAS 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  A++   G  I + T Q + +  +   +YL+L + +   +NRL  ++AL+ 
Sbjct: 174 TITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLPLMFGVNRLGKRLALRR 227


>gi|161502503|ref|YP_001569615.1| hypothetical protein SARI_00547 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863850|gb|ABX20473.1| hypothetical protein SARI_00547 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 235

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 97/223 (43%), Gaps = 8/223 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++ +    +   +T+       V   +L ++L++     ++             ++ T++
Sbjct: 13  LWTDGYRFTGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIRFPI-------WLFTYI 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + + Y   +   ++   +F+  +          +AL+  T A+  EI    
Sbjct: 66  FRGTPLYVQLLVFYSGMYTLEIVKGTDFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      D
Sbjct: 125 IRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+ +   I + T Q      I   +YL +S ++     R   +
Sbjct: 185 LLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERR 227



 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 35/79 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL  S ++   ++  ++  GR+S+NK + +   ++  +FR  P  V +   Y
Sbjct: 20  FTGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIRFPIWLFTYIFRGTPLYVQLLVFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + ++  +     +  F 
Sbjct: 80  SGMYTLEIVKGTDFLNAFF 98


>gi|150015936|ref|YP_001308190.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149902401|gb|ABR33234.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 213

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 110/228 (48%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +  + L    +T++      V S  LG+++++  T  S    + +G       I
Sbjct: 1   MSYILEIMPQVLEGLQVTLEIFVLTLVLSIPLGVIIAVMRTSKSLILKQISG-------I 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ I + +   F  P++              F +  +A +    A+  EI
Sbjct: 54  YILIMRGTPLLLQIIVIF---FGLPLV--------GISFDRFPAAILAFTLNYGAYFGEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++  GQ+E A  LGL+ ++    ++LPQA ++++PP+ ++   L+K++SL   V
Sbjct: 103 FRAGIESIDNGQVEGAKVLGLSSKQTFFRIILPQAFKTVMPPVANEITTLVKDTSLVYVV 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +L+ +G T  N+    +  +LI   +YL +  + +  + ++  K 
Sbjct: 163 GMDELLKIGKTAANRDVSLVP-LLIVGAVYLVVIAIFSQVLKKIEEKY 209



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 33/84 (39%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ +  +G ++   R S + ++  I  +Y+ + R  P L+ I  ++
Sbjct: 12  LEGLQVTLEIFVLTLVLSIPLGVIIAVMRTSKSLILKQISGIYILIMRGTPLLLQIIVIF 71

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNN 173
             +  V    D          LN 
Sbjct: 72  FGLPLVGISFDRFPAAILAFTLNY 95


>gi|300312812|ref|YP_003776904.1| glutamate/aspartate ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300075597|gb|ADJ64996.1| ABC-type glutamate/aspartate transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 227

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 10/230 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLY 223
                +    L      +  + KI + + V G+V    L   RLSRH         PL +
Sbjct: 5   FDFSAVTPAALRVLGDGLLVSLKITLVAIVFGMVWGTLLAMMRLSRHS--------PLQW 56

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +        P L Q  F           S  +A + + AA+ AE
Sbjct: 57  FAAGYVNLFRSIPLVMVLLWFFLIVPQLLQKLFGLSPANDLRMTSALVAFALFEAAYYAE 116

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V RGQM AA ALGLT+ +A  +V+LPQA R+++P L +Q + L +++SL   
Sbjct: 117 IIRAGINSVSRGQMAAAYALGLTYPQAMGMVILPQAFRNMVPLLLTQGIVLFQDTSLVYV 176

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              AD      +I  + G+ IE++ +   +Y  +   ++L + R   K+A
Sbjct: 177 SALADFFGRAYSIGERNGRIIEMLFVAGAVYFIICFSMSLMVKRYRKKVA 226



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G + +  +    ++   + GTL+   RLS +  + W    YV +FR+IP ++V+
Sbjct: 15  LRVLGDGLLVSLKITLVAIVFGMVWGTLLAMMRLSRHSPLQWFAAGYVNLFRSIPLVMVL 74

Query: 146 FFLYKSVLSV 155
            + +  V  +
Sbjct: 75  LWFFLIVPQL 84


>gi|291529899|emb|CBK95484.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium siraeum 70/3]
          Length = 247

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 13/219 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LH 245
            KIF F+ +  I L L    L +    K    L  LYI   ++ G P ++ I + Y  L 
Sbjct: 33  IKIFGFTLLFSIPLGLIVAAL-KMCRFKPISWLTNLYI--LIMRGTPLMLQIIVVYYALP 89

Query: 246 F--------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           F           V    + +  +  S  F  + IA     AA+ AEI R G+ ++PRGQ 
Sbjct: 90  FLKTATKGSGGFVESLLSGVDPAAESFMFTMVIIAFVLNYAAYFAEIFRGGIESIPRGQY 149

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALG+T  +    ++LPQ ++ I+P  +++ + L+K++SLA  V +++++      +
Sbjct: 150 EAAAALGMTKAQTFFRIILPQVIKRIVPASSNEVITLVKDTSLANVVAYSEIMLAAKQQM 209

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                ++  + I    Y  ++ ++      +  K+    
Sbjct: 210 -MNYSSLVPLFIAGVFYFVMATVLTALFGFIEKKLNYYR 247



 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  +    ++ +  +G +V A ++   K ++W+  +Y+ + R  P ++ I  +
Sbjct: 25  LLENLIPTIKIFGFTLLFSIPLGLIVAALKMCRFKPISWLTNLYILIMRGTPLMLQIIVV 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           Y ++         +     G F+ +               + + +FVL
Sbjct: 85  YYAL-----PFLKTATKGSGGFVESLLSGVDPAAESFMFTMVIIAFVL 127


>gi|145295858|ref|YP_001138679.1| hypothetical protein cgR_1783 [Corynebacterium glutamicum R]
 gi|140845778|dbj|BAF54777.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 315

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 15/258 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
             ++ +       +     +               L     T+ +     + + V+G  L
Sbjct: 34  LALLFWIGSILSGNGQLDANKWTPFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTAL 93

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L      R    +  +    + I TF    +P L+L+   YQ+        Q+N +  S
Sbjct: 94  GL-----GRISEIRILRWFCAVIIETF--RAIPVLILMIFAYQMF------AQYNIVPSS 140

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F ++   L+ Y  + IAEI+RSG+ ++P+GQ EAAIALG++ R+ T  +LLPQA+
Sbjct: 141 QL--AFAAVVFGLTMYNGSVIAEILRSGIASLPKGQKEAAIALGMSSRQTTWSILLPQAV 198

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            +++P L SQ +  LK+S+L   +G+ ++V  G    +     +  + +   I + L+  
Sbjct: 199 AAMLPALISQMVIALKDSALGYQIGYIEVVRSGIQSASVNRNYLAALFVVALIMIVLNFS 258

Query: 381 IALFMNRLNAKIALKEKK 398
           + +  +R+  ++     +
Sbjct: 259 LTVLASRIERQLRAGRAR 276



 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R  N+ + I+  +L   +  W  + +  N +                
Sbjct: 6   RATVLYDAPGPKGRRFNLIITILTVVLGLALLFWIGSILSGNGQLD-------------- 51

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
                   P+ +  ++ T IL G   T   A   +I A ++GT +G GR+S  +++ W C
Sbjct: 52  ---ANKWTPFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFC 108

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            V +E FR IP L+++ F Y+       +P   +     +F
Sbjct: 109 AVIIETFRAIPVLILMIFAYQMFAQYNIVPSSQLAFAAVVF 149


>gi|307329225|ref|ZP_07608390.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306885124|gb|EFN16145.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 314

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 13/257 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +  L    +  L          + +F      +     + T  K+F  + VL + L +
Sbjct: 27  LAVLGLIVFAVVRLNDKGQFAPGMWNIFNYAGVRTSIRDGVVTTLKVFAVAAVLSLALGV 86

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R    K  +     +I  F    +P L+ I + + L      L   + +G S  
Sbjct: 87  LL-AVGRLSDHKAVRWFATGFIELF--RAVPLLITIYVLWVLF-----LTYRSDLGLSGD 138

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +  F +L I L+ Y  +  AE++R+G+ +VPRGQ EAA ALG+   +    VL+PQA+R+
Sbjct: 139 NTGFWALVIGLTVYNGSVQAEVLRAGINSVPRGQREAAYALGMRKTQVMMTVLVPQAVRA 198

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           ++P + SQ +  LK++SL   + +           G  ++N     + +I++   IY+++
Sbjct: 199 MLPTIISQLVVTLKDTSLGYVITYQELLFQLQQLAGNIVVNDDNPYVPVIIVGGAIYIAM 258

Query: 378 SIMIALFMNRLNAKIAL 394
            + ++     +  +   
Sbjct: 259 CLALSALATWIERRGRR 275



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 25/144 (17%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      RV N    ++  L +  + ++ V                  L+++  F
Sbjct: 3   SSVLYDAPGPKARVRNRIYSVVGGLAVLGLIVFAVVR----------------LNDKGQF 46

Query: 71  EIDQGIV-PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
                 +  Y    +       G V T  +     + +  +G L+  GRLS +K V W  
Sbjct: 47  APGMWNIFNYAGVRTSIR---DGVVTTLKVFAVAAVLSLALGVLLAVGRLSDHKAVRWFA 103

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVL 153
             ++E+FR +P L+ I+ L+   L
Sbjct: 104 TGFIELFRAVPLLITIYVLWVLFL 127


>gi|290960130|ref|YP_003491312.1| binding-protein-dependent ABC transporter transmembrane protein
           [Streptomyces scabiei 87.22]
 gi|260649656|emb|CBG72771.1| putative binding-protein-dependent transport system integral
           membrane component [Streptomyces scabiei 87.22]
          Length = 284

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 12/185 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+R       + +   Y   F   G   LVL+     + F  P+   +  +         
Sbjct: 62  LARQHRLWIVRFVAGAYFEIF--RGTSALVLMI---WVFFVVPLTFGWQLV-------PM 109

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L C   A+ +EIVR  + AVP  Q EA +AL  T  +  R ++LPQA   ++PP
Sbjct: 110 WAAVLTLGCTYGAYGSEIVRGAVAAVPAAQREAGVALSFTPAQRMRKIVLPQAWPEMVPP 169

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  + LLK ++L   +G AD       + N TGQ+  +  + + +Y  L+  I   M 
Sbjct: 170 FCNLLIELLKGTALVSVLGVADTTFAAQLVRNATGQSAPVYSVILVMYFVLAFAITRVMR 229

Query: 387 RLNAK 391
           ++  +
Sbjct: 230 QVERR 234



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 40/134 (29%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +   S     +L G   T  L   G      +   VG  R     +V ++   Y E+FR
Sbjct: 24  DFAFSSGLWELLLRGVWITVQLTVYGAALGAAVAFAVGLARQHRLWIVRFVAGAYFEIFR 83

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
               LV++ +++  V          +           G     +     A +       G
Sbjct: 84  GTSALVLMIWVFFVVPLTFGWQLVPMWAAVLTLGCTYGAYGSEIVRGAVAAVPAAQREAG 143

Query: 198 IVLSLFATRLSRHF 211
           + LS    +  R  
Sbjct: 144 VALSFTPAQRMRKI 157


>gi|209517528|ref|ZP_03266368.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502061|gb|EEA02077.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 225

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 2/225 (0%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             +  G+     T+ T A I     ++ IV  +    +   F     K L         +
Sbjct: 3   HFDWSGIPGALPTLWTGAIITFKITLIAIVFGIIWGTILAMFRLSPIKPLAWFAQGYVTL 62

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           F    LV++ L + L    P + Q      + +     S  +A S + AA+ +EI+R+G+
Sbjct: 63  FRSIPLVMVLLWFFL--IVPQVLQSVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGI 120

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ+ AA ALG+T+ +A RL++LPQA R+++P L +Q + L +++SL   +  AD 
Sbjct: 121 QAVPRGQVNAAFALGMTYAQAMRLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADF 180

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 I ++ G  +E++L    +Y  + ++ +  +  L  K+A 
Sbjct: 181 FRTATNIGDRDGTNVEMVLFAGAVYFVICVIASSLVKGLQKKVAR 225



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   I GT++   RLS  K +AW  + YV +FR+IP ++V+ + 
Sbjct: 16  LWTGAIITFKITLIAIVFGIIWGTILAMFRLSPIKPLAWFAQGYVTLFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|152987811|ref|YP_001349399.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150962969|gb|ABR84994.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 222

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 7/219 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      M    K+ V   + G+ L      L R    K    +   Y++ F      ++
Sbjct: 11  LPSLWEGMLMTLKLMVLGVLGGVALGTVL-ALMRLSSSKLLSNIAGFYVNYFR-----SI 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +F  P + ++   G  T    F S  +A   + AA+  EIVR+G+ A+P+G
Sbjct: 65  PLLLVITWFYFAVPFILRW-ITGEDTPVGAFTSCLVAFMMFEAAYYCEIVRAGIQAIPKG 123

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+T+ +  RLV+LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 124 QMGAAQALGMTYGQTMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLMDFLNSARS 183

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  GQA E ++    +Y  +S   +  + RL  ++ +
Sbjct: 184 RGDIIGQANEFLIFAGLVYFVVSFTASFAVKRLQKRLTV 222



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L   G++    +GT++   RLS++KL++ I   YV  FR+IP L+VI + 
Sbjct: 14  LWEGMLMTLKLMVLGVLGGVALGTVLALMRLSSSKLLSNIAGFYVNYFRSIPLLLVITWF 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  +L                               
Sbjct: 74  YFAVPFILRWITGEDTPVGAFTSCLVAFMMFEAAYYCEI 112


>gi|23308880|ref|NP_601160.2| glutamate ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|21903423|sp|P48245|GLUD_CORGL RecName: Full=Glutamate transport system permease protein gluD
 gi|21324723|dbj|BAB99346.1| ABC-type transporter, permease components (glutamate)
           [Corynebacterium glutamicum ATCC 13032]
          Length = 273

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 11/235 (4%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                   +    ++    +    K  VFS +L +V+      L R    +  +    + 
Sbjct: 11  NKWTPFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALG-LGRISEIRILRWFCAVI 69

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I TF    +P L+L+   YQ+        Q+N +  S +   F ++   L+ Y  + IAE
Sbjct: 70  IETF--RAIPVLILMIFAYQMF------AQYNIVPSSQL--AFAAVVFGLTMYNGSVIAE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSG+ ++P+GQ EAAIALG++ R+ T  +LLPQA+ +++P L SQ +  LK+S+L   
Sbjct: 120 ILRSGIASLPKGQKEAAIALGMSSRQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQ 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G+ ++V  G    +     +  + +   I + L+  +    +R+  ++     +
Sbjct: 180 IGYIEVVRSGIQSASVNRNYLAALFVVALIMIVLNFSLTALASRIERQLRAGRAR 234



 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 48/95 (50%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             P+ +  ++ T IL G   T   A   +I A ++GT +G GR+S  +++ W C V +E 
Sbjct: 13  WTPFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIET 72

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           FR IP L+++ F Y+       +P   +     +F
Sbjct: 73  FRAIPVLILMIFAYQMFAQYNIVPSSQLAFAAVVF 107


>gi|89094512|ref|ZP_01167451.1| ABC basic amino acid transporter, inner membrane subunit
           [Oceanospirillum sp. MED92]
 gi|89081248|gb|EAR60481.1| ABC basic amino acid transporter, inner membrane subunit
           [Oceanospirillum sp. MED92]
          Length = 230

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 2/208 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V S  +G++  +     ++    K    L   Y + F+      L+++ + + 
Sbjct: 15  WITIQLAVCSLFVGLLFGIIGAS-AKLSSSKIANTLGNGY-TLFVRGMPELLLVLTIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +              F++   ALS    A+  E+ RS ++ +P+GQ EAA+AL
Sbjct: 73  SSAVLMAIASLFGYDEYIELSPFVAGVTALSIAFGAYATEVFRSAMMEIPKGQREAAVAL 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R ++LPQ  R  +P L + +L LLK+++L   +G  +L+      +  T + 
Sbjct: 133 GMTRFQTFRRIVLPQVWRLALPGLGNLFLVLLKDTALVSVIGLNELMRQTAVAVGNTKEP 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                    +YL ++ +    +  L  +
Sbjct: 193 FTFYFAAAMVYLLMTSISMAGLYLLERR 220


>gi|330816870|ref|YP_004360575.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327369263|gb|AEA60619.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 248

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +F  S V+G +LSL    + R             YI  F   G P L+ + L Y 
Sbjct: 20  PTTLGLFFLSLVIGGLLSLVIVAM-RVSRHWLPNRFARAYILVF--RGSPLLIQMFLVYY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LG+F  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA
Sbjct: 77  ------GLGEFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEA 130

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A+GL+     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II Q
Sbjct: 131 GYAIGLSGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQ 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T +  E+ +    IYL L+ ++   +  L  +++   +
Sbjct: 191 TYRTTEVFVCAALIYLFLNFVVVRLLGFLETRLSRHLR 228



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++     T  L F  ++   ++  ++ A R+S + L     R Y+ VFR  P L+ +
Sbjct: 12  MRQLIAAVPTTLGLFFLSLVIGGLLSLVIVAMRVSRHWLPNRFARAYILVFRGSPLLIQM 71

Query: 146 FFLYKSVLSVLPIPDHSIVL 165
           F +Y  +     I +  +  
Sbjct: 72  FLVYYGLGEFGVIRESFLWP 91


>gi|296158385|ref|ZP_06841216.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891329|gb|EFG71116.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 218

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 18/223 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++     FV S VLG+VL+L      R    +        +I+  +I GLP +
Sbjct: 14  LKGAVVTIEITFCSFVLSTVLGLVLALM-----RVSDNRAVSNAAATFIN--VIRGLPII 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + ++F  P L              F + +I L    + + AE  R+G+ A+  G
Sbjct: 67  VQL---FYIYFVLPDL--------GVQLSAFQAGFIGLGVAYSVYQAENFRAGIQAIDPG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA ++G+      R V+LPQA R  +P   +  + +LK+SSLA  +  A++   G  
Sbjct: 116 QIEAAQSIGMRGAMIMRRVVLPQAFRISLPAYGNTLVMMLKDSSLASTITVAEMTRAGQL 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I + T Q + +  +   +YL LS+ +   + R+  ++ LK K+
Sbjct: 176 IASSTFQNMTVFTLVALLYLGLSLPLVYGLRRIERRLGLKGKR 218



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 44/110 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +   +   +L G V T  + F   + +T++G ++   R+S N+ V+     ++ V R 
Sbjct: 3   FQNAIEFLPILLKGAVVTIEITFCSFVLSTVLGLVLALMRVSDNRAVSNAAATFINVIRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +P +V +F++Y  +  +            G+ +               A 
Sbjct: 63  LPIIVQLFYIYFVLPDLGVQLSAFQAGFIGLGVAYSVYQAENFRAGIQAI 112


>gi|238753376|ref|ZP_04614739.1| Glutamine transport system permease protein glnP [Yersinia ruckeri
           ATCC 29473]
 gi|238708329|gb|EEQ00684.1| Glutamine transport system permease protein glnP [Yersinia ruckeri
           ATCC 29473]
          Length = 204

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +     + + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 28  FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FALPMMM-------PVRIDPF 75

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 76  SAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPP 135

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 136 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWTAVAVIYLIITLALSFALR 195

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 196 RLERKLKI 203


>gi|17545201|ref|NP_518603.1| glutamate/aspartate transmembrane ABC transporter protein
           [Ralstonia solanacearum GMI1000]
 gi|17427492|emb|CAD14010.1| probable glutamate/aspartate transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 242

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 4/236 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +  V       N   L +    + T   + + S+++ +VL      L R    K    
Sbjct: 4   HWNWGVFFTEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVL-RTVPSKALSG 62

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   Y+  F    +P +V + + Y +  +  V G       +  +  F+   + L  +TA
Sbjct: 63  LATAYVELF--RNIPLIVQLFIWYFVMPEL-VPGGDYIKQMNPATAMFLCAMLCLGTFTA 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP A R I+PPLTS++LN+ KNS
Sbjct: 120 ARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M  + A+  L
Sbjct: 180 AVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRL 235



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 45/86 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A ++G+++G  R   +K ++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            +V +F  Y  +  ++P  D+   + 
Sbjct: 76  LIVQLFIWYFVMPELVPGGDYIKQMN 101


>gi|331015348|gb|EGH95404.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 247

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVEQRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|240140777|ref|YP_002965257.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens AM1]
 gi|240010754|gb|ACS41980.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens AM1]
          Length = 240

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 12/227 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS    T+ T    +  +F LG V+ +      R    +T  A+   Y+  F    +P
Sbjct: 24  MLLSGLAWTVVTALCSWAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + L Y   F  P L            P   F +  + L  +TAA +AE VR+G+ A
Sbjct: 77  LLVQMFLWY---FVLPELLPARLSSAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRA 133

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ +A +ALGLT  +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +
Sbjct: 134 LPRGQAQAGLALGLTWAQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTA 193

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   + Q  E       +Y++L++++      L  ++A+   +
Sbjct: 194 RARSMQEFSFQVFEAFTAATLLYVALNLVVIAGATLLERRVAVPGGR 240



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 36/76 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA  +L G   T   A      A  +G++VG  R   ++    I   YVE FRN+P 
Sbjct: 18  AGTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  +  +LP
Sbjct: 78  LVQMFLWYFVLPELLP 93


>gi|116255278|ref|YP_771111.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259926|emb|CAK03020.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 213

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +    F  + +     +    FV G +  L    L+R       + +   YI+ F   
Sbjct: 1   MGHEEFVFLLIGLKWTVLLSAVGFVCGGIAGLGV-ALARASGIPLLERVTAGYIAVF--Q 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + Y                   +   ++++ I L+ + +A++ EI R  + 
Sbjct: 58  GTPLLMQLFVVYY-----------GLALVGLMLDSWVAVAIGLTLHASAYLGEIWRGSIE 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ EAA AL L +    + V+LPQA+R  +P      + L+K +SLA  VGF +L 
Sbjct: 107 AVPRGQTEAAKALSLRYISRMKDVILPQALRISLPATIGFLVQLIKGTSLASIVGFTELT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  I NQ  Q + +  I   +Y  +   + +   RL  K A   +
Sbjct: 167 RAGNIISNQIFQPLTVFGIVGILYFLMCCPLTILGARLERKFAASAR 213



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   T  L+  G +   I G  V   R S   L+  +   Y+ VF+  P L+ +F +
Sbjct: 9   LLIGLKWTVLLSAVGFVCGGIAGLGVALARASGIPLLERVTAGYIAVFQGTPLLMQLFVV 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  V  + D  + +  G+ L+              A
Sbjct: 69  YYGLALVGLMLDSWVAVAIGLTLHASAYLGEIWRGSIEA 107


>gi|120608916|ref|YP_968594.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120587380|gb|ABM30820.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 217

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 14/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + +F LG    L     +R       + +   YI  F     P L+ + L + 
Sbjct: 19  WATLLLSLMAFALGGAAGLVVL-FARVGRHPGLQRVSRTYIQVF--QNTPLLMQMFLVF- 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F           + +  I L+ YT+A++AE+ R  + A+PRGQ EA+ +L
Sbjct: 75  ----------FGASMAGFDVSPWAAAAIGLTLYTSAYLAEVWRGCVQAIPRGQWEASSSL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            + + +  R V+LPQA+R  + P     + ++K +++A  +GF DL  +G  + N T Q 
Sbjct: 125 AMGYFQQMRHVVLPQAVRLAVAPTVGFSVQIVKGTAVASIIGFEDLTKLGSMLANATFQP 184

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I  +    Y  L   ++   + L  K+
Sbjct: 185 FLIYGLVAAGYFLLCWPLSACASHLEKKL 213



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 31/97 (31%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+          G +V   R+  +  +  + R Y++VF+N P L+ +F ++  
Sbjct: 17  GLWATLLLSLMAFALGGAAGLVVLFARVGRHPGLQRVSRTYIQVFQNTPLLMQMFLVFFG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                           G+ L               A 
Sbjct: 77  ASMAGFDVSPWAAAAIGLTLYTSAYLAEVWRGCVQAI 113


>gi|296117708|ref|ZP_06836292.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
 gi|295969439|gb|EFG82680.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
          Length = 312

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 60/289 (20%), Positives = 120/289 (41%), Gaps = 15/289 (5%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +         +         R+Y  +   I   V+ +  +    +               
Sbjct: 1   MAVRATVLYDAPGPKGRRNNRIYSVIAAVIFLAVIAWVAWTLNNNGQFESRLWTPFLQSQ 60

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L     T+ +     + + + G+VL L      R    +  + +  + +  F  
Sbjct: 61  TWTTYLLPGLRGTLFSAFASIILACIFGVVLGL-----GRLSEHRIVRWICGVIVEFF-- 113

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P L+L+   YQL     ++         +    F ++ +AL+ Y  + IAEI+RSG+
Sbjct: 114 RAIPVLLLMIFAYQLFAVYDLVP--------SQQLAFSAVVLALTLYNGSVIAEILRSGI 165

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+GQ EAA A+GL+HR     VLLPQA+ S++P L +Q +  LK+S+L   +G+ ++
Sbjct: 166 RSLPKGQTEAAKAIGLSHRLTMYRVLLPQAIASMLPALIAQMVIALKDSALGYQIGYVEI 225

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V  G    +     +  ++I   I + ++  +     R+  ++     +
Sbjct: 226 VRSGIQSASYNQNFLASLVIVGIIMVLINWGLTTLAQRIERQLRAGRAR 274



 Score = 84.2 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 22/156 (14%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R +N    +I A++   +  W    + NN +                
Sbjct: 4   RATVLYDAPGPKGRRNNRIYSVIAAVIFLAVIAWVAWTLNNNGQ---------------- 47

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           FE  +   P+    ++ T +L G   T + AF+ +I A I G ++G GRLS +++V WIC
Sbjct: 48  FE-SRLWTPFLQSQTWTTYLLPGLRGTLFSAFASIILACIFGVVLGLGRLSEHRIVRWIC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            V VE FR IP L+++ F Y+       +P   +  
Sbjct: 107 GVIVEFFRAIPVLLLMIFAYQLFAVYDLVPSQQLAF 142


>gi|260463585|ref|ZP_05811784.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium opportunistum WSM2075]
 gi|259030676|gb|EEW31953.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium opportunistum WSM2075]
          Length = 242

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 14/220 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  L           +I +   +L +++ + A  L+R +     + L  +Y+  F   G
Sbjct: 26  YSLFLPGLLQGAVLTIEIAILGSLLAVIMGVLA-ALARLYGPAPLRWLATVYVEIF--RG 82

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV +   + L F  P                F+   +AL     A+ +E+VR  +++
Sbjct: 83  TSALVQL---FWLFFVLPQF--------GVTLDAFLVAVVALGLNVGAYGSEVVRGAILS 131

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ E   AL ++  +  R V+LPQA  ++IPP  + ++ LLK++SL   +  +DL  
Sbjct: 132 VGRGQWEGCTALNMSRAQMLRRVILPQAFVAMIPPWGNLFIELLKSTSLVSLITLSDLAF 191

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +   T + I I  + + +YL +S+++ + M  L  +
Sbjct: 192 KAQQMNQNTFKTIPIFTLVLLMYLVMSLVLTIGMRLLERR 231



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +A  G + A I+G L    RL     + W+  VYVE+FR    LV +F+L
Sbjct: 33  LLQGAVLTIEIAILGSLLAVIMGVLAALARLYGPAPLRWLATVYVEIFRGTSALVQLFWL 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  +       D  +V    + LN
Sbjct: 93  FFVLPQFGVTLDAFLVAVVALGLN 116


>gi|312882237|ref|ZP_07741983.1| ABC amino acid transporter permease component [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309370081|gb|EFP97587.1| ABC amino acid transporter permease component [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 223

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T   +  +  V  ++L+L    + R F          LYI
Sbjct: 1   MGFDFQYMLGLLPILFKYLGTTMAMATWGVVFALILALLIANI-RVFSVPLLSPFCQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P L   N          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQIFPFLVGLN---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A + V+LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSIGMTKLQAMKRVILPQATRVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++    N    ++
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVLLTQIQNWAEYRL 217



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 34/66 (51%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +A  G++ A I+  L+   R+ +  L++  C++Y+  FR  P LV +F LY  +
Sbjct: 19  LGTTMAMATWGVVFALILALLIANIRVFSVPLLSPFCQLYISFFRGTPLLVQLFLLYYGL 78

Query: 153 LSVLPI 158
             + P 
Sbjct: 79  PQIFPF 84


>gi|322420357|ref|YP_004199580.1| polar amino acid ABC transporter inner membrane subunit [Geobacter
           sp. M18]
 gi|320126744|gb|ADW14304.1| polar amino acid ABC transporter, inner membrane subunit [Geobacter
           sp. M18]
          Length = 266

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 14/211 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                 I   S V  + + L A  LS+       + L  +YI   LI G P LV I + +
Sbjct: 67  WLVTLAISAASLVTSLTIGLCA-ALSQRSSFLPLRFLGKIYIE--LIRGTPLLVQILVFF 123

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +  D              +   ++   + L+ +  A+I+EI+R+G+ ++   Q+E+A A
Sbjct: 124 YVVADA-----------FGIGNRYLVGILTLALFAGAYISEIIRAGIESIGESQLESARA 172

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT R+  R V+ PQ MR I+PPL  Q+ +L+K+SSL   +  ++       +   T  
Sbjct: 173 IGLTRRQTYRFVVFPQVMRRILPPLAGQFASLIKDSSLLSIIAVSEFTLNAQEVNAFTYS 232

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +E  L     YL+L++ I++    L  +  
Sbjct: 233 TMESYLPLALGYLALTLPISMLSRYLEGRYR 263



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 39/84 (46%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T+  SY    L G++ T  ++ + ++ +  IG      + S+   + ++ ++Y+E+ R
Sbjct: 52  DWTAVYSYRRKFLTGWLVTLAISAASLVTSLTIGLCAALSQRSSFLPLRFLGKIYIELIR 111

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH 161
             P LV I   +  V     I + 
Sbjct: 112 GTPLLVQILVFFYVVADAFGIGNR 135


>gi|17549154|ref|NP_522494.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17431405|emb|CAD18084.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 248

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 104/211 (49%), Gaps = 10/211 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +   VLGIVL+   + L      +      L  + T L++G+  + L+ L   ++F
Sbjct: 28  IACTLILSVLGIVLAFPLSVL--LALARLSPWSALRSVVTALVYGVRGVPLLMLILWVYF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +  G       F ++   L  Y   +++E+VR+G+ A+P+GQMEAA ALG +
Sbjct: 86  LVPLFIGRDVSG-------FTTMLCTLVIYEGVYLSEVVRAGIEALPKGQMEAARALGHS 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           +  A R+V+LPQA+ +++P + +Q+++ +K ++L   +   +L      I N    +  +
Sbjct: 139 YLGAMRVVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQ 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I  +   IY ++   +      L  +IA K 
Sbjct: 199 IFFLLAVIYFAVCWSLTRAARALEHRIAAKR 229



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+  G++ A  +  L+   RLS    +  +    V   R +P L++I ++Y
Sbjct: 25  LGGIACTLILSVLGIVLAFPLSVLLALARLSPWSALRSVVTALVYGVRGVPLLMLILWVY 84

Query: 150 KSVLSV 155
             V   
Sbjct: 85  FLVPLF 90


>gi|254225348|ref|ZP_04918960.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125622189|gb|EAZ50511.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
          Length = 365

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 123 WIWLVFVNLYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 182

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 183 RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSQGSEIDKLLR 232

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 233 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 292

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 293 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYS 352

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 353 IWLEGKLHTGHKR 365



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   L        L   +       +     +       +    +     + LS +    
Sbjct: 217 LPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMG 276

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +     +P +  +   +F   +LVLI   +  L   +      N++G +T S  F
Sbjct: 277 LIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVF 336

Query: 267 MSLYIALSCYTAAFIA 282
           ++L   + C+  +  +
Sbjct: 337 VALVFWIFCFGMSRYS 352


>gi|327482801|gb|AEA86111.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           DSM 4166]
          Length = 231

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 81/164 (49%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G+P L+ + L Y    +        F   +     F +  IAL     A+  E+ R 
Sbjct: 58  IVRGVPELLWVLLIYFGTINLIRGLGELFGIANLALSPFAAGTIALGLCFGAYATEVFRG 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L+A+P+G  EA +ALGL  R+    ++LPQ  R  +P L + ++ L+K+++L   +G  
Sbjct: 118 ALLAIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLE 177

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++      +  + +     L+  FIYL L+I+  + M+ L  +
Sbjct: 178 EIMRRSQIAVTASKEPFTFFLVAAFIYLCLTIVAMIGMHFLEKR 221


>gi|227112027|ref|ZP_03825683.1| arginine transporter permease subunit ArtQ [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 238

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 10/224 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPT 234
               + V + VLG+VL++          +             + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALVLGLVLAMLFAVWETVRWKAVSWTGTAVVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+++           V        G      F+   IAL+   AA+ ++ +R  L AVP+
Sbjct: 73  LLMMLADGFTLNLFIVQIPVKLDIGMFEISPFLCGVIALALLYAAYASQTLRGALKAVPQ 132

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    
Sbjct: 133 GQWESGQALGLSKAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTK 192

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  +T +     ++   IYL ++++    + R+  +    E++
Sbjct: 193 SIATRTQEPFTWYVVAAAIYLIITLLSQYVLKRIELRTTRFERR 236


>gi|167837858|ref|ZP_02464741.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia thailandensis MSMB43]
          Length = 225

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGALPTLWTGAIITFKITLLAIVIGIVWGTLL-ALMRLSGVKPLAWFAQGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P + Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQVLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ AA ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNAAFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G ++E+IL     Y  +    +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTSVEMILFAGACYFVVCSAASALVKGLQKKVTR 225



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAIITFKITLLAIVIGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|149010774|ref|ZP_01832145.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147765255|gb|EDK72184.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
          Length = 225

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 11/219 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             +              + + SF+L +VL +F   +S        + L  +++       
Sbjct: 10  YFQDFGQFFNGFLFTLALAIGSFILAMVLGIFFGAMS-TSKRPILRILARIFVEF--YQN 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   + +   +  P++          + P + +  + +  Y  A+IAE++RSG+ +
Sbjct: 67  TPLLVQFVIVF---YGLPLIS-----DHIIMIPIYWTAVLCVGLYHGAYIAEVIRSGIQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQMEAA++ G T+  A RL++LPQA R I+ PLT+Q +NL+KN+S    +   DL+ 
Sbjct: 119 IPSGQMEAALSQGFTYISALRLIILPQAFRIILLPLTNQIVNLIKNTSTVAIISGVDLMF 178

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           V  +     G  I   L    +Y +L   +A F  ++  
Sbjct: 179 VTKSWSALNGNYIPGFLGAALLYFALCFPVAQFGRKMEQ 217



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  LA    I A ++G   GA   S   ++  + R++VE ++N P LV    +
Sbjct: 17  FFNGFLFTLALAIGSFILAMVLGIFFGAMSTSKRPILRILARIFVEFYQNTPLLVQFVIV 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  +        +  
Sbjct: 77  FYGLPLISDHIIMIPIYW 94


>gi|146284416|ref|YP_001174569.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
 gi|145572621|gb|ABP81727.1| amino acid ABC transporter, permease protein [Pseudomonas stutzeri
           A1501]
          Length = 231

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 81/164 (49%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G+P L+ + L Y    +        F   +     F +  IAL     A+  E+ R 
Sbjct: 58  IVRGVPELLWVLLIYFGTINLIRGLGELFGIANLALSPFAAGTIALGLCFGAYATEVFRG 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L+A+P+G  EA +ALGL  R+    ++LPQ  R  +P L + ++ L+K+++L   +G  
Sbjct: 118 ALLAIPKGHREAGLALGLGKRRIFLRLILPQMWRLALPGLGNLFMILMKDTALVSVIGLE 177

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++      +  + +     L+  FIYL L+I+  + M+ L  +
Sbjct: 178 EIMRRSQIAVTASKEPFTFFLVAAFIYLCLTIVAMIGMHFLEKR 221


>gi|84394263|ref|ZP_00992989.1| ABC-type amino acid transport system, permease component [Vibrio
           splendidus 12B01]
 gi|84375102|gb|EAP92023.1| ABC-type amino acid transport system, permease component [Vibrio
           splendidus 12B01]
          Length = 365

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 119/255 (46%), Gaps = 16/255 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATR 206
           ++ + +  +  +  ++   ++    GL            + +   ++GIV+SL    A  
Sbjct: 121 RTWIWLFFVNIYPFIIAGLLYGGVFGLEVVDTHKWGGLLVTLIIALVGIVVSLPIGVALA 180

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       +++  +YI  +    L T++ +A           +    F+     + + 
Sbjct: 181 LGRRSEMPIIRSMCTVYIEIWRGVPLITVLFMA----------SVMLPLFLSEGMETDKL 230

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +   + +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K T L++LPQA++  IP 
Sbjct: 231 IRALVGVVLFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPS 290

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIAL 383
           + + ++ L K++SL + +G  D++ +G          G + E  +    ++      ++ 
Sbjct: 291 IVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFSTESYVFVALVFWVFCFGMSR 350

Query: 384 FMNRLNAKIALKEKK 398
           +   L  ++    K+
Sbjct: 351 YSIWLENRLHTGHKR 365



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 33/64 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG  +  GR S   ++  +C VY+E++R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVALALGRRSEMPIIRSMCTVYIEIWRGVPLITVLFMASVM 216

Query: 152 VLSV 155
           +   
Sbjct: 217 LPLF 220


>gi|295394800|ref|ZP_06805015.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972396|gb|EFG48256.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 276

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 118/265 (44%), Gaps = 21/265 (7%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           V + +   +  L ++ F+     +   +            +          T+       
Sbjct: 21  VILSIVSGVLLLGIVAFVVWKFSAAGQLDAAKWEPFAYATIQKALFKGLLATLKVAVVAS 80

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + +LG+V +L      R   +K       L +  F   GLP L+LI   Y L      
Sbjct: 81  VLALILGVVFALL-----RLSSKKWISVPATLVLEFF--RGLPVLLLIFATYLLF----- 128

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                          F  + I L+ Y    IAE+VR+G++AVPRGQ EAA ++GL+  + 
Sbjct: 129 ---------GKTIGSFWPVVIGLTLYNGMVIAEVVRAGILAVPRGQREAAQSIGLSDSQT 179

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
             LVL+PQA R+++P L +Q + LLK+S+L   V + DL+     I  Q G  +   ++ 
Sbjct: 180 MSLVLMPQAFRAMMPTLIAQIVVLLKDSALGYMVTYQDLLHQVNIIGRQYGNLLPTFIVG 239

Query: 371 MFIYLSLSIMIALFMNRLNAKIALK 395
             IY+++++++A     L +++  K
Sbjct: 240 AVIYIAINLIVAGIARWLESRMQRK 264



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +   A+  G + T  +A    + A I+G +    RLS+ K ++    + +E FR +P L+
Sbjct: 60  TIQKALFKGLLATLKVAVVASVLALILGVVFALLRLSSKKWISVPATLVLEFFRGLPVLL 119

Query: 144 VIFFLYKSVLSVLPIPD 160
           +IF  Y      +    
Sbjct: 120 LIFATYLLFGKTIGSFW 136


>gi|144899136|emb|CAM76000.1| binding-protein-dependent transport system inner membrane component
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 380

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 19/256 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             Y  + +V+ +        FG+ ++         LT+       V +F L IVL+L   
Sbjct: 140 LGYAWLGTVVVVAWLMWGGFFGLTYVETAQWGGLPLTLGLALLGIVLAFPLSIVLAL--- 196

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R  +    KA+   YI          LV +     + F         F+       +
Sbjct: 197 --GRRSNLPAIKAICTGYIELVRGVP---LVSVLFMASVMFPL-------FLPEGVTIDK 244

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +     ++ +TAA++AE VR GL A+PRGQ EAA ALGL++ +  RL++LPQA+R +IP
Sbjct: 245 LLRALAGMTLFTAAYLAEAVRGGLQAIPRGQEEAADALGLSYWRKMRLIVLPQALRLVIP 304

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAI--EIILIWMFIYLSLSIMIA 382
           P+ +Q+++  K++SL   VG  DL++     +     +    E  +    +Y      ++
Sbjct: 305 PIVNQFISCFKDTSLVTIVGLYDLLAATKAALADPEWRPFFVEGYVAAALVYWCFCFFMS 364

Query: 383 LFMNRLNAKIALKEKK 398
            +   L  ++A   ++
Sbjct: 365 RYSQWLERELATGTRR 380



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           ++ A  +  ++  GR S    +  IC  Y+E+ R +P + V+F         LP 
Sbjct: 184 IVLAFPLSIVLALGRRSNLPAIKAICTGYIELVRGVPLVSVLFMASVMFPLFLPE 238


>gi|326315079|ref|YP_004232751.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323371915|gb|ADX44184.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 217

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 14/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + +F LG    L     +R       + +   YI  F     P L+ + L + 
Sbjct: 19  WATLLLSLMAFALGGAAGLAVL-FARVGRHPGLQRVSRTYIQVF--QNTPLLMQMFLVF- 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F           + +  I L+ YT+A++AE+ R  + A+PRGQ EA+ +L
Sbjct: 75  ----------FGASMAGFDVSPWTAAAIGLTLYTSAYLAEVWRGCVQAIPRGQWEASSSL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            + + +  R V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + N T Q 
Sbjct: 125 AMGYFQQMRHVVLPQAVRLAIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSMLANATFQP 184

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I  +    Y  L   ++   + L  K+
Sbjct: 185 FLIYGLVAAGYFLLCWPLSACASHLEKKL 213



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 30/97 (30%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+          G  V   R+  +  +  + R Y++VF+N P L+ +F ++  
Sbjct: 17  GLWATLLLSLMAFALGGAAGLAVLFARVGRHPGLQRVSRTYIQVFQNTPLLMQMFLVFFG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                           G+ L               A 
Sbjct: 77  ASMAGFDVSPWTAAAIGLTLYTSAYLAEVWRGCVQAI 113


>gi|206563062|ref|YP_002233825.1| glutamine ABC transporter permease [Burkholderia cenocepacia J2315]
 gi|198039102|emb|CAR55065.1| glutamine ABC transporter, permease protein [Burkholderia
           cenocepacia J2315]
          Length = 218

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I  F  V G V+ + A  + R +  K    L  +YI
Sbjct: 1   MNFDWSAIWAALPDLMDGVRLTVFIAFFGLVGGFVVGMIAG-MFRAYGPKAMNVLAQVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +     L+F  P+L      G         +  IA++  + A++AE+
Sbjct: 60  E--LIRGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIIAITVNSGAYLAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++P+G  EA +A+GL+  +    V+ P A R +IPPL +Q +  LK++SL + +
Sbjct: 108 VRGALLSIPKGLTEAGLAMGLSMPRVLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  II    QA+EI      IYL L+  + L +  +  ++ +
Sbjct: 168 GVGELTRKGQEIIAGNFQAVEIWTAVAVIYLLLTGAMTLTLRLVEKRMKI 217


>gi|167760761|ref|ZP_02432888.1| hypothetical protein CLOSCI_03146 [Clostridium scindens ATCC 35704]
 gi|167661648|gb|EDS05778.1| hypothetical protein CLOSCI_03146 [Clostridium scindens ATCC 35704]
          Length = 221

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 11/232 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                    L      +     +   SF L +VL++    +  +F       +  LY+S 
Sbjct: 1   MDWVFTGDLLEAMMKALPVTLSLTGISFTLALVLAILI-AIVEYFKVPILDRIFSLYVSF 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +  + L   L+F  P      F+        +    + L+  +AA++ E+VR
Sbjct: 60  F--RGTPLIPQLFL---LYFGIPT-----FVPALRNVSAYSVCVVGLTLNSAAYMKEVVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L++VP GQ EAA+A G++  +    ++LPQA R  IP L +  ++++K +S+A  +G 
Sbjct: 110 GSLLSVPEGQKEAALAHGMSSMQTMFRIVLPQAARVAIPSLFNNLVDIVKGTSMAFTIGV 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++ +        T    E  ++ M +Y  + +++  F   +         +
Sbjct: 170 IEITAAANLRAAVTFNYFEAYMVLMLLYWVIILILERFETVIEKYFEKTRTR 221



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 30/81 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +        A++     T  L       A ++  L+         ++  I  +YV  F
Sbjct: 1   MDWVFTGDLLEAMMKALPVTLSLTGISFTLALVLAILIAIVEYFKVPILDRIFSLYVSFF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLP 157
           R  P +  +F LY  + + +P
Sbjct: 61  RGTPLIPQLFLLYFGIPTFVP 81


>gi|299769348|ref|YP_003731374.1| ABC-type arginine transport system, permease component
           [Acinetobacter sp. DR1]
 gi|298699436|gb|ADI90001.1| ABC-type arginine transport system, permease component
           [Acinetobacter sp. DR1]
          Length = 229

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 9/234 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        LS   +T+       + S ++G++ +      S+  + K  + +   Y  
Sbjct: 1   MFLSGYGPLLLSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSNIKALRYIATAY-- 53

Query: 226 TFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           T LI  +P LV++ L +  L      + +   +    ++P F++  I L+    A+  E 
Sbjct: 54  TTLIRSVPDLVIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTET 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R    +VP GQ+EAA+A G+T  +  R VL PQ MR  +P + + +  L+K ++L   +
Sbjct: 113 FRGAFQSVPTGQIEAAMAYGMTPWQVFRRVLFPQMMRFALPGIGNNWQVLIKATALVSII 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D+V +       T Q     ++   IYL+++ +  L +  L  + +   +K
Sbjct: 173 GLTDIVKITQDAGRSTMQLFFFSIVAAAIYLAITTVSNLILMWLERRYSAGVRK 226


>gi|297618710|ref|YP_003706815.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus voltae A3]
 gi|297377687|gb|ADI35842.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus voltae A3]
          Length = 220

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 13/219 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L      +    KI   SF+  ++++     L      K    L   Y+  F   G+P
Sbjct: 9   YNLPALFWGLVITLKIAFLSFIFAVIIAHIVGILRALNIPKPVDMLFRGYVEIF--RGVP 66

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+L+   Y                   V     +  + LS    A+I+EIVR+ L+++P
Sbjct: 67  LLILLFFIYY-----------GLPSIGIVMDNTTAAVLGLSLNGGAYISEIVRASLLSIP 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ +A  +LG++  ++   V++PQ +R  +P L + +  ++K SSL   +   +L  VG
Sbjct: 116 KGQWDACSSLGMSKVQSLIYVIIPQTIRISMPSLMNSFSAIIKESSLVSVIAITELTRVG 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I  +T    E+ ++   IYLS+  M++L  + +  ++
Sbjct: 176 QLIYTKTSSPFEVYIVVAIIYLSVIGMVSLLSDLIEKRL 214



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIPPLVVIF 146
           A+  G V T  +AF   I A II  +VG  R L+  K V  + R YVE+FR +P L+++F
Sbjct: 13  ALFWGLVITLKIAFLSFIFAVIIAHIVGILRALNIPKPVDMLFRGYVEIFRGVPLLILLF 72

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLN 172
           F+Y  + S+  + D++     G+ LN
Sbjct: 73  FIYYGLPSIGIVMDNTTAAVLGLSLN 98


>gi|312170820|emb|CBX79080.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 368

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G ++  G+ P+        A+++G ++         +    + +L   G   
Sbjct: 78  WVFIHARFG-QLMYGLYPHELRWRINLALVIGLLS---------VIPMFVKSLPRRGS-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  + PL+V   +Y   L +  +                     T
Sbjct: 126 -----------YIVGWAVVYPLLVWLLMYGGWLGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +   GI+L+L      R       + L +L+I  +    L T++ ++ 
Sbjct: 162 LTLIIAAVGIAGALPTGILLAL-----GRRSQMPVVRTLCVLFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   +   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGSSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFHTGR 365


>gi|293602767|ref|ZP_06685207.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
 gi|292818783|gb|EFF77824.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
          Length = 218

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 97/228 (42%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +    L       + + +F  G ++ + A  + R       + +   YI  F  
Sbjct: 4   FSTWDIVRNLLLAARWTVVLSLVAFAGGALMGVLAL-MMRTSRVALMRRVSWAYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F         P +++   AL+ ++ AF+AEI R  +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLSLLGVEVPPWLAAGAALTLWSGAFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+ +L L + +  R V+LPQA+R  I P     + ++K+++L   +GF +L
Sbjct: 110 EAIPKGQWEASASLALGYVQQMRYVVLPQALRIAIAPTVGFAVQIVKSTALTSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I N T     +      IY +L   ++    RL  K+    +
Sbjct: 170 SKASTVITNATFSPFTVYACAALIYFALCWPLSRLSLRLERKLHAPHR 217



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 35/108 (32%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S       +L+    T  L+        ++G L    R S   L+  +   Y+E+F+  P
Sbjct: 5   STWDIVRNLLLAARWTVVLSLVAFAGGALMGVLALMMRTSRVALMRRVSWAYIELFQGTP 64

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            L+ +F  +  +  +       +     + L +             A 
Sbjct: 65  LLMQLFLAFFGLSLLGVEVPPWLAAGAALTLWSGAFLAEIWRGCVEAI 112


>gi|213971834|ref|ZP_03399936.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301383371|ref|ZP_07231789.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302064064|ref|ZP_07255605.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302134968|ref|ZP_07260958.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213923380|gb|EEB56973.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 215

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++ L    + R   +   +    LYI  F  
Sbjct: 3   FTLWDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVM-RTSEKSGPRVTAKLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +L +T  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESISKGQWEASASLAMTPLEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHLERRL 211



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG LV   R S         ++Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVMRTSEKSGPRVTAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|167585825|ref|ZP_02378213.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 229

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 78/175 (44%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T LI G+P LVL+ L +                       F++  + L     A+  E
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNQLTDLAGWDQIDIDPFLAGVLVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   ++VPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  L+K+++L   
Sbjct: 112 TFRGAFLSVPRGQLEAGSAYGMTSWQVFSRIMFPQMMRFALPGIGNNWQVLVKSTALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     LI   IYL+++ +    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLIAGAIYLAITTISNFVLMWLEKRYSTGVRK 226


>gi|241206764|ref|YP_002977860.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860654|gb|ACS58321.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 270

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 10/216 (4%)

Query: 187 AKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIF-GLPTLVLIA 239
              FV + VLG+ + L         R    F+ +  + +P+L +  ++ F G P LV   
Sbjct: 58  LVAFVLATVLGLGICLLGMADSQVLRQIARFYIEIIRGIPILVLLFYVAFVGAPALV--- 114

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             Y       V                    IAL+   ++FIAEI R+G  +V  GQ+EA
Sbjct: 115 AAYNFLISPLVTSGMAEPILVRDLSLMWRAIIALTVGYSSFIAEIFRAGFQSVDLGQIEA 174

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGL+  +  R V+ PQA+R I PPL++ +++++K+SSL   +G AD+  +G      
Sbjct: 175 AKALGLSRYRRFRSVVFPQAIRVIFPPLSNDFVSMVKDSSLVSVLGVADITQMGKVYAAG 234

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + +  E   I  +IYL L+I ++L + R    +  +
Sbjct: 235 SFRFFETYSIVTYIYLILTIGLSLALRRTEKWMKSR 270


>gi|163853361|ref|YP_001641404.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium extorquens PA1]
 gi|218532218|ref|YP_002423034.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium chloromethanicum CM4]
 gi|163664966|gb|ABY32333.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium extorquens PA1]
 gi|218524521|gb|ACK85106.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium chloromethanicum CM4]
          Length = 240

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 12/227 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS    T+ T    +  +F LG V+ +      R    +T  A+   Y+  F    +P
Sbjct: 24  MLLSGLAWTVVTALCSWAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + L Y   F  P L            P   F +  + L  +TAA +AE VR+G+ A
Sbjct: 77  LLVQMFLWY---FVLPELLPARLGSAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRA 133

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ +A +ALGLT  +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +
Sbjct: 134 LPRGQAQAGLALGLTWAQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTA 193

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   + Q  E       +Y++L++++      L  ++A+   +
Sbjct: 194 RARSMQEFSFQVFEAFTAATLLYVALNLVVIAGATLLERRVAVPGGR 240



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 36/76 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA  +L G   T   A      A  +G++VG  R   ++    I   YVE FRN+P 
Sbjct: 18  AGTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  +  +LP
Sbjct: 78  LVQMFLWYFVLPELLP 93


>gi|319784007|ref|YP_004143483.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169895|gb|ADV13433.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 219

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 18/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L     T          SFV GI+ ++         +     A P+  +  ++  
Sbjct: 12  YWDLLLIGAWWTAVLTVSAGALSFVGGILFAVIV------LYAPKIVAYPVRALM-WVFM 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + L Y           F  +      P   +  + L  + A + A+I+R+G++
Sbjct: 65  GTPLLLQLFLIY-----------FGLVQIGIDIPALAAGIVGLGLHFAVYNADIIRAGIV 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ E A ++G    +  R V++PQA+R+  PP+    + LLK SS+   +G A+LV
Sbjct: 114 AVDVGQTEGARSIGFGKWQTLRHVVIPQAIRNTAPPIGGNLIALLKESSIVSVIGIAELV 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 I++T +  E  +    +Y  L++++   + R    + +  
Sbjct: 174 HSAQLAISETFRPFEFYITAAALYYILNLVLEAALRRFERHVEVSR 219



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 39/93 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T  + Y   +L+G   T  L  S    + + G L     L A K+VA+  R  + VF
Sbjct: 4   LDFTVVAPYWDLLLIGAWWTAVLTVSAGALSFVGGILFAVIVLYAPKIVAYPVRALMWVF 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
              P L+ +F +Y  ++ +            G+
Sbjct: 64  MGTPLLLQLFLIYFGLVQIGIDIPALAAGIVGL 96


>gi|218662377|ref|ZP_03518307.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli IE4771]
          Length = 352

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 10/221 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++ F       ++    +            R L    +T+   A   V   +L + L+ 
Sbjct: 37  ILVAFWALLAALLIFTVVNGWDPEKFTRYGPRYLHGLWVTLSLVAISVVCGAILSLPLA- 95

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGST 261
               ++R    +        YI  F   G P L  + L Y  L   +P L          
Sbjct: 96  ----MARLSKNRALNWFAYCYIYFF--RGTPLLAQLFLVYYGLGVFRPQLEAIGIWW--F 147

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +     A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA  
Sbjct: 148 FREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQHEAAAALGIHKAIAFRKIILPQAFI 207

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
             + P  ++ + L+K S++   +   DL+       ++T +
Sbjct: 208 VALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFR 248



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L    ++   I+   +   RLS N+ + W    Y+  FR  P L 
Sbjct: 64  RYGPRYLHGLWVTLSLVAISVVCGAILSLPLAMARLSKNRALNWFAYCYIYFFRGTPLLA 123

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            +F +Y  +    P  +   +  F       GL   
Sbjct: 124 QLFLVYYGLGVFRPQLEAIGIWWFFREAWYCGLFAM 159


>gi|322831961|ref|YP_004211988.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167162|gb|ADW72861.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 237

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 95/205 (46%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S V+G +L++    + R    K  +    +++ T++  G P  V + + Y   +
Sbjct: 27  LWLLISSVVIGGLLAV-PMAVGRVSSNKFLRYP--IWLYTYIFRGTPLYVQLLVFYSGMY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++   +F+  +          +AL+  T A+  EI    + AVP G++EAA A G +
Sbjct: 84  SLEIVRGTDFL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVPHGEIEAANAYGFS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    ++LP A+R+ +P  +++ + +L +++LA      D++ +   I + T Q    
Sbjct: 143 RFKLYTCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDVLKIARDINSATYQPFYA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   IYL +S ++     +   +
Sbjct: 203 FGIAAVIYLCVSFVLIGLFRKAEKR 227



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL  S ++   ++   +  GR+S+NK + +   +Y  +FR  P  V +   Y
Sbjct: 20  FTGLAITLWLLISSVVIGGLLAVPMAVGRVSSNKFLRYPIWLYTYIFRGTPLYVQLLVFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + S+  +     +  F 
Sbjct: 80  SGMYSLEIVRGTDFLNAFF 98


>gi|317180216|dbj|BAJ58002.1| amino acid ABC transporter permease [Helicobacter pylori F32]
          Length = 240

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 44  PLAIISFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 100

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 101 --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 150

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 151 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 210

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +    +  
Sbjct: 211 LPIYLEAALIYWLFCLVLEVIQKHVEK 237


>gi|251791765|ref|YP_003006486.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540386|gb|ACT09007.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 247

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 10/230 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYIST 226
                   +T+   A   V + +LG++L+       +  R     +    +  PLL    
Sbjct: 21  QWLWQGFQVTLGLAAVTVVLATLLGLILAAGRDSRTWLLRWLVIAYCSLFRNTPLLVQLF 80

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F  FG+  L+   L   L+           +G +  S EF++    L+ Y+AAFIAE +R
Sbjct: 81  FWYFGVAQLLPAGLMQWLN----SPHIIPLVGLNIPSFEFLAGLFGLTLYSAAFIAEEIR 136

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  V RGQ  AA ALGLTH +A R V+LPQA+R  +PPL  QY+N++KNSSLA+A+G 
Sbjct: 137 AGIAGVARGQQYAACALGLTHWQAMRYVVLPQALRIALPPLLGQYMNIIKNSSLAMAIGV 196

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+L      +  +T +  +   +   +Y+++  ++  +      +   +E
Sbjct: 197 AELSYASRQVETETLRTFQAFGVATVLYIAVVALLEGWGQWRQYRQPARE 246



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 43/93 (46%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I   +  +     Y   +  GF  T  LA   ++ AT++G ++ AGR S   L+ W+  
Sbjct: 5   SIRHWLTDWLLAPQYLQWLWQGFQVTLGLAAVTVVLATLLGLILAAGRDSRTWLLRWLVI 64

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            Y  +FRN P LV +FF Y  V  +LP      
Sbjct: 65  AYCSLFRNTPLLVQLFFWYFGVAQLLPAGLMQW 97


>gi|218674227|ref|ZP_03523896.1| amino acid ABC transporter permease [Rhizobium etli GR56]
          Length = 276

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 11/257 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++ F       ++    +            R L    +T+   A   V   +L + L+ 
Sbjct: 30  ILVAFWALFAALLIFTVVNGWDPDKFTRYGPRYLHGLWVTLSLVAISVVCGAILSLPLA- 88

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGST 261
               ++R    +        YI  F   G P L  + L Y  L   +P L          
Sbjct: 89  ----MARLSKNRALNWFAYGYIYFF--RGTPLLAQLFLVYYGLGVFRPQLEAIGIWW--F 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +     A++  TAA+ AEI+R  + +VP GQ EAA ALG+    A R V+LPQA  
Sbjct: 141 FREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQREAAAALGIHKAIAFRKVILPQAFI 200

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             + P  ++ + L+K S++   +   DL+       ++T    +  L     YL++   +
Sbjct: 201 VALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFDY-QTYLWAAIFYLAIVEAL 259

Query: 382 ALFMNRLNAKIALKEKK 398
                 +  ++    K+
Sbjct: 260 RHLWAWIERRLTRHLKR 276



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 34/96 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L    ++   I+   +   RLS N+ + W    Y+  FR  P L 
Sbjct: 57  RYGPRYLHGLWVTLSLVAISVVCGAILSLPLAMARLSKNRALNWFAYGYIYFFRGTPLLA 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            +F +Y  +    P  +   +  F       GL   
Sbjct: 117 QLFLVYYGLGVFRPQLEAIGIWWFFREAWYCGLFAM 152


>gi|170703107|ref|ZP_02893926.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171321019|ref|ZP_02910006.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|170131986|gb|EDT00495.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171093716|gb|EDT38860.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 225

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        +           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGAMPTLWSGAIVTFKITLIAIVVGIVWGTLL-ALMRLSGVKPLAWFAKAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P + Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQVLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQM AA ALG+ +  A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQMNAAFALGMNYAHAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTTVEMVLFAGACYFVICSVASALVKGLQKKVTR 225



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWSGAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|50121593|ref|YP_050760.1| arginine transporter permease subunit ArtQ [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612119|emb|CAG75569.1| arginine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 238

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 10/224 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG----------KALPLLYISTFLIFGLPT 234
               + V + VLG+ L++          +             + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALVLGLALAMLFAVWETVRWKAVSWTGTAVVTLVRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+++     +     V        G      F+   IAL+   AA+ ++ +R  L AVP+
Sbjct: 73  LLMLLADGFILNLFIVQIPVKLDIGMFEISPFLCGVIALALLYAAYASQTLRGALKAVPQ 132

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    
Sbjct: 133 GQWESGQALGLSKSAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTK 192

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  +T +     ++   IYL ++++    + R+  +    E++
Sbjct: 193 SIATRTQEPFTWYVVAAAIYLVITLLSQYVLKRIELRTTRFERR 236


>gi|328956327|ref|YP_004373660.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Coriobacterium glomerans PW2]
 gi|328456651|gb|AEB07845.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Coriobacterium glomerans PW2]
          Length = 249

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 108/227 (47%), Gaps = 10/227 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +        T+  +      S +LG +L +F+T  SR       +A+  +Y+  +   
Sbjct: 17  QMDIFWEGFFFTLAVSVAGLALSMILGTLLGVFSTTRSR-----ALRAISRIYVEFYQNT 71

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LP  V I   Y       +L              F    + +  Y AA++AE++R+G+ 
Sbjct: 72  PLP--VQIFFMYMA--GPQILQAILGAATPVRIAPFAIGSLGVGLYHAAYVAEVIRTGIE 127

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VPRGQ+E+A + G +  +A R ++LPQ  + I+PPL +Q LNL+KN+S+   +   DL+
Sbjct: 128 SVPRGQLESARSQGFSRAQAYRYIVLPQTFKMILPPLCNQALNLIKNTSVLALIAGGDLM 187

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 ++ +G  ++  ++   +Y  +   +A+ +  L ++   + +
Sbjct: 188 YQADNFVSSSG-FLQGYIMACALYFLICFPLAILVQVLESRSKRRPR 233



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 38/67 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF  T  ++ +G+  + I+GTL+G    + ++ +  I R+YVE ++N P  V IFF+
Sbjct: 21  FWEGFFFTLAVSVAGLALSMILGTLLGVFSTTRSRALRAISRIYVEFYQNTPLPVQIFFM 80

Query: 149 YKSVLSV 155
           Y +   +
Sbjct: 81  YMAGPQI 87


>gi|317182238|dbj|BAJ60022.1| amino acid ABC transporter permease [Helicobacter pylori F57]
          Length = 237

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 41  PLAIISFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|257481838|ref|ZP_05635879.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289624457|ref|ZP_06457411.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|298485185|ref|ZP_07003279.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298160297|gb|EFI01324.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330866607|gb|EGH01316.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330886063|gb|EGH19964.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330986785|gb|EGH84888.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009473|gb|EGH89529.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 215

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++ L    + R   +   +    LYI  F  
Sbjct: 3   FTLWDILRNLLIGLQWTVALSLVAFIGGGLIGLLVMGM-RTSEKTGPRVTAKLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +L +T  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESISKGQWEASASLAMTPFEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHLERRL 211



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG LV   R S         ++Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTVALSLVAFIGGGLIGLLVMGMRTSEKTGPRVTAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|194016444|ref|ZP_03055058.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus pumilus ATCC 7061]
 gi|194011917|gb|EDW21485.1| glutamine ABC transporter, permease/substrate-binding protein
           [Bacillus pumilus ATCC 7061]
          Length = 214

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 12/190 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    + L++++   I G P +V +   Y        L    FI    V   
Sbjct: 37  ALFRLSPFKILNFIALVFVNA--IRGTPFIVQLFFIYF------GLNTLEFISLDRVP-- 86

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I ++    A+ +EI+R+G+ ++ +GQ EAA +LG T  +  R ++LPQA R ++P
Sbjct: 87  --AGIITVAINAGAYFSEIIRAGIQSIDKGQTEAARSLGFTGGQNMRFIVLPQAFRRMLP 144

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +T+Q +  LK++SL   +G AD++  G    + T   + + LI   IY  +  +++L  
Sbjct: 145 AITNQAIISLKDTSLLSIIGIADIMQRGQVQASATFDPLNVWLIVGIIYFVIIYLLSLLA 204

Query: 386 NRLNAKIALK 395
           +    +  +K
Sbjct: 205 SYAERRFDIK 214


>gi|227327248|ref|ZP_03831272.1| histidine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 238

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   L+   +T+       V   ++ + L++      R F          
Sbjct: 6   QQYWQPLLWSDGYRLTGLAMTLWLLISSVVIGGLMALPLAIARVSPRRRFSFPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++ T++  G P  V + + Y   +   ++   + +  +          +AL+  T A+ 
Sbjct: 60  -WLFTYVFRGTPLYVQLLVFYSGVYSLEIVRGTDML-NAFFRSGLNCAILALALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + AVP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA
Sbjct: 118 TEIFAGAIRAVPHGEIEAARAYGFSRFKQYRCIILPGALRIALPAYSNEVILMLHSTALA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   D++ +   I   T Q      I   IYL++S ++     +    
Sbjct: 178 FTVTVPDILKIARDINAATYQPFYAFGIAAVIYLAISFVLIGLFRKAERH 227


>gi|170691907|ref|ZP_02883071.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143191|gb|EDT11355.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 229

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 75/175 (42%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T L+ G+P LVL+ L +                       F++    L     A+  E
Sbjct: 52  VYTTLVRGVPDLVLMLLLFYSIQIWLNNLTDLLGWDQIDIDPFVAGVAVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  ++K ++L   
Sbjct: 112 TFRGAFLAVPRGQLEAGAAYGMTSWQVFARIMFPQMMRFALPGIGNNWQVMVKATALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     L+   IYL ++ +    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLLAGAIYLVITTVSNFVLMYLEKRYSTGVRK 226


>gi|73540164|ref|YP_294684.1| amino acid ABC transporter permease [Ralstonia eutropha JMP134]
 gi|72117577|gb|AAZ59840.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 242

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 4/232 (1%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            H  V       N   L +    +     + + S+V+ + +      L R    K     
Sbjct: 5   WHWGVFLEQAAQNETYLDWMISGLKVTIALGLSSWVIALAIGSVLGVL-RTVPNKWLSGF 63

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              Y+  F    +P LV + + Y +  +  + G       +  + +F++  + L  +TAA
Sbjct: 64  AAAYVELF--RNIPLLVQLFIWYFVGPEL-LPGGETIKQMNPFTQQFLAAMLCLGTFTAA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + E VRSG+ ++PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS+
Sbjct: 121 RVCEQVRSGINSLPRGQKNAGLAMGFTLPQTYRFVLLPMAFRVIVPPLTSEFLNIFKNSA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +A  +G  +L + G  +++ T +  E  +    +Y  ++I++ L M  + A+
Sbjct: 181 VASTIGLLELAAQGRQLVDYTARPYESFIAVTVMYALINIVVMLVMRWVEAR 232



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 41/86 (47%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   ++ G   T  L  S  + A  IG+++G  R   NK ++     YVE+FRNIP
Sbjct: 16  QNETYLDWMISGLKVTIALGLSSWVIALAIGSVLGVLRTVPNKWLSGFAAAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            LV +F  Y     +LP  +    + 
Sbjct: 76  LLVQLFIWYFVGPELLPGGETIKQMN 101


>gi|148977576|ref|ZP_01814155.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145963227|gb|EDK28494.1| amino acid ABC transporter, permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 246

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 98/233 (42%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ + S +L +VL      L++    +  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  LTIEVALLSLILAMVLG-MLGALAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINEWLNEWFTSSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV  G+MEAA A G++  KA   +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDAGEMEAAKAYGMSPVKAFHRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V V       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLEDMVRVSALAAGSTKMPFTFYMTVALIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G V T  +A   +I A ++G L    +L+  +    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINEWLNEWFTSSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|300692511|ref|YP_003753506.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
 gi|299079571|emb|CBJ52249.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum PSI07]
          Length = 242

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 114/236 (48%), Gaps = 4/236 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +  V       N   L +    + T   + + S+++ ++L      L R    K    
Sbjct: 4   HWNWGVFFTEAAQNQTYLDWLLSGLKTTIALGLSSWIIALILGSVLGVL-RTVPNKLLSG 62

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   Y+  F    +P +V + + Y +  +  V G       +  +  F+   + L  +TA
Sbjct: 63  LATAYVELF--RNIPLIVQLFIWYFVMPEL-VPGGDYIKQMNPATAMFLCAMLCLGTFTA 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP A R I+PPLTS++LN+ KNS
Sbjct: 120 ARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M  + A+  L
Sbjct: 180 AVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMTIMRWVEARTRL 235



 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 46/86 (53%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A I+G+++G  R   NKL++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKTTIALGLSSWIIALILGSVLGVLRTVPNKLLSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            +V +F  Y  +  ++P  D+   + 
Sbjct: 76  LIVQLFIWYFVMPELVPGGDYIKQMN 101


>gi|254451516|ref|ZP_05064953.1| ABC-type glutamine transport system, permease component
           [Octadecabacter antarcticus 238]
 gi|198265922|gb|EDY90192.1| ABC-type glutamine transport system, permease component
           [Octadecabacter antarcticus 238]
          Length = 206

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 102/213 (47%), Gaps = 13/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + ++ +V+ L    L     ++  +     Y+   ++  +P LVLI     
Sbjct: 6   YYTILISVTAILISVVVGLLV-ALPGLSEKRGWRMFNRTYVE--IVRSVPILVLIL---W 59

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +++  P +              F +  +AL+   +AF AEI R+G+ ++ RGQ EAA ++
Sbjct: 60  VYYGLPTVSGITL-------SVFWAGVLALALSDSAFQAEIFRAGIQSIGRGQYEAAQSV 112

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            L +R   R ++LPQA+R I+P L +Q + +LK SSL   +G  +L      ++    + 
Sbjct: 113 SLNYRDTMRYIILPQAIRRILPALGNQLVYMLKMSSLVSVIGLQELTRKANELVVSEYRP 172

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +EI  I +  YL L ++++  +     ++   +
Sbjct: 173 LEIYTILVLEYLVLILIVSAGVRWFERRLKASD 205



 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 35/64 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++ + ++ + ++G LV    LS  +      R YVE+ R++P LV+I ++Y  
Sbjct: 4   GAYYTILISVTAILISVVVGLLVALPGLSEKRGWRMFNRTYVEIVRSVPILVLILWVYYG 63

Query: 152 VLSV 155
           + +V
Sbjct: 64  LPTV 67


>gi|71733225|ref|YP_274660.1| glutamine ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71553778|gb|AAZ32989.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 246

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWHWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPAGQYEASRALGMGYMRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYNVLCYGLTRLAAVVERRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|89074704|ref|ZP_01161162.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89049468|gb|EAR55029.1| Putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 216

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 17/226 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   T+       +FS ++G++L+L      R +       L  L
Sbjct: 3   FDFDYMLSLMPILLKYLPTTLLMATIGAIFSLIVGLILALI-----RIYQLPLLNILTQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P L   +          F +  I LS + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQIIPSLVGLD---------AFSAAVIGLSLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +  V R Q EA++ +G+T  +  R ++LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAITGVDRSQREASLTIGMTEWQTMRRIILPQATRIALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +G  ++++      + + +  E  L    IY ++ +++  + N 
Sbjct: 167 FTLGVPEIMAKAQMEASSSFKFFEAFLAVAMIYWAVVVVLTRYNNW 212



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G I + I+G ++   R+    L+  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLPTTLLMATIGAIFSLIVGLILALIRIYQLPLLNILTQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  ++P
Sbjct: 75  YYGLPQIIP 83


>gi|229521466|ref|ZP_04410885.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|297578945|ref|ZP_06940873.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|229341564|gb|EEO06567.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|297536539|gb|EFH75372.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 365

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 123 WIWLVFVNLYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 182

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 183 RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSQGSEIDKLLR 232

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 233 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 292

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 293 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYS 352

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 353 IWLEGKLHTGHKR 365



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   L        L   +       +     +       +    +     + LS +    
Sbjct: 217 LPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMG 276

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +     +P +  +   +F   +LVLI   +  L   +      N++G +T S  F
Sbjct: 277 LIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVF 336

Query: 267 MSLYIALSCYTAAFIA 282
           ++L   + C+  +  +
Sbjct: 337 VALVFWIFCFGMSRYS 352


>gi|330877714|gb|EGH11863.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 247

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPTGQYEASRALGMGYVRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVEQRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|227552460|ref|ZP_03982509.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|227178406|gb|EEI59378.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
          Length = 237

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 19/237 (8%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
                + + + +  + L     T+       + S  LGI+L+L         H K  +  
Sbjct: 20  KEEKKMEYLIEVMPQLLVGALTTLKLFLFTLIGSLPLGIILALGL-----SLHFKPLRYF 74

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             L    +++ G P L+ +   +                   V   F +  IA     AA
Sbjct: 75  --LQTYVWIMRGTPLLLQLIFVFY-----------GLPTIGIVFDRFEAALIAFILNYAA 121

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI R G+ ++P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SS
Sbjct: 122 YFAEIFRGGIQSIPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSS 181

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L   +G  D++  G   + +    +  +L    IYL+L+ ++ + M ++  K+    
Sbjct: 182 LIYILGLGDVMRAGKIAMERDA-TLLPLLGVAIIYLTLTGILTIVMKQVEGKLNYYR 237



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 38/100 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG + T  L    +I +  +G ++  G     K + +  + YV + R  P L+ + F+
Sbjct: 35  LLVGALTTLKLFLFTLIGSLPLGIILALGLSLHFKPLRYFLQTYVWIMRGTPLLLQLIFV 94

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + ++  + D          LN              + 
Sbjct: 95  FYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSI 134


>gi|124268065|ref|YP_001022069.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine [Methylibium petroleiphilum PM1]
 gi|124260840|gb|ABM95834.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Methylibium petroleiphilum PM1]
          Length = 229

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T  ++ + S  +G+V +L    L R    +       ++  T++I G P L
Sbjct: 10  LPLYASGLATTLQLLLISLAIGLVAALPLAVL-RVSASRWLHG--PVWCFTYVIRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           V + L Y        L QF ++  S   P     +    +A +  T A+  EI+   L A
Sbjct: 67  VQLFLVYY------GLAQFEWVRASIAWPWLQSAWFCACLAFAVNTCAYTTEIIAGSLKA 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            P G++EAA ALGL+  +  R +LLP A+R  +P   ++ + +L  +SLA  V   DL  
Sbjct: 121 TPHGEVEAARALGLSRAQVWRRILLPSALRRALPAYGNEAVLMLHGTSLASVVTLLDLTG 180

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + ++     E  L    +YL L++ +   ++    +
Sbjct: 181 AAREVNSRFYLPFEAFLTAAAVYLGLTLALVGALHAAERR 220


>gi|332041346|gb|EGI77708.1| polar amino acid ABC transporter inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 240

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 98/185 (52%), Gaps = 8/185 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L +  T L++ +    L+ + +  +F  P +           + +F ++ IAL
Sbjct: 52  RVSPWRALRWPVTALVYVVRGTPLLMVVFWAYFFLPSVTG-------AKTDQFTTMLIAL 104

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +  A++AE+VR+G+  +PRGQME+A +LGL+  +A R V+LPQA+R+++P L SQ++ 
Sbjct: 105 ALFNGAYLAEVVRAGIQGLPRGQMESARSLGLSWLQAMRGVILPQALRNMLPSLVSQFVM 164

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K +SL   +G  ++  +   I  Q     +++ LI    Y  L   ++ F   +  ++
Sbjct: 165 TIKETSLGYIIGLNEVSFITSQINTQVFVYPVQLYLILGLSYFVLCFSLSRFAYWMERRL 224

Query: 393 ALKEK 397
             K +
Sbjct: 225 ERKAR 229


>gi|317130817|ref|YP_004097099.1| polar amino acid ABC transporter inner membrane subunit [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475765|gb|ADU32368.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cellulosilyticus DSM 2522]
          Length = 224

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 94/189 (49%), Gaps = 12/189 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R    K    L  +YI   LI G P +V   +   L+F        N           
Sbjct: 48  IARLSKSKIIYGLATIYIE--LIRGTPIIVQAIV---LYFAVSQNIGINL-------NAP 95

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  +A++    A+I+EIVR G+ ++ +GQMEA  +LGL+ R+  R ++ PQA + +IPP
Sbjct: 96  TAGIVAIAINAGAYISEIVRGGVQSIDKGQMEAGRSLGLSSRQTMRYIIWPQAFKRMIPP 155

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  LK++S+   +   ++  +    ++ +   ++  ++    YL ++I   L + 
Sbjct: 156 LGNQFIISLKDTSVFAIISLQEVTFLMRMYVSSSANTLQPYIMLCLAYLIITIPAMLILR 215

Query: 387 RLNAKIALK 395
           R+  ++ + 
Sbjct: 216 RIERRLDVS 224



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 74  QGIVPYTSDSSYATAI---LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
             ++ + +   +A A+   L G   T ++   G+    IIGT VG  RLS +K++  +  
Sbjct: 3   DSLIEFFTHPDWAGALPLLLRGLQMTLYVTLIGIFFGFIIGTFVGIARLSKSKIIYGLAT 62

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSV 155
           +Y+E+ R  P +V    LY +V   
Sbjct: 63  IYIELIRGTPIIVQAIVLYFAVSQN 87


>gi|291457472|ref|ZP_06596862.1| permease protein of ABC transporter [Bifidobacterium breve DSM
           20213]
 gi|291381307|gb|EFE88825.1| permease protein of ABC transporter [Bifidobacterium breve DSM
           20213]
          Length = 366

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 114/267 (42%), Gaps = 18/267 (6%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN----NRGLSFPTLTMDTNAK 188
           + +   I  L+ +  L   ++ +   PD    L + ++           F    +    K
Sbjct: 21  IRIVNWIAALIFVAVLVLVLMRLHNPPDGENQLSWELWKPAVEREAWTDFYLPGLWMTIK 80

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             V + V  +V  L    + R       + +  + +       +  L++   ++      
Sbjct: 81  ATVLAVVGAVVFGLVFG-VGRLLPNPLVRGISAVIVEFCRAVPVLLLMIFFWRWFAFAGL 139

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  
Sbjct: 140 P-------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTET 186

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +     ++ ++
Sbjct: 187 QSLIQIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFNILQTLV 246

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   IY     +++     L +++  +
Sbjct: 247 MAAVIYFVACWLLSRLAEWLPSRMQQR 273



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  I  V V
Sbjct: 56  ELWKPAVEREAWTDFYLPGLWMTIKATVLAVVGAVVFGLVFGVGRLLPNPLVRGISAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|134046500|ref|YP_001097985.1| polar amino acid ABC transporter inner membrane subunit
           [Methanococcus maripaludis C5]
 gi|132664125|gb|ABO35771.1| amino acid ABC transporter membrane protein, PAAT family
           [Methanococcus maripaludis C5]
          Length = 226

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 14/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + L  + +           KI VFS ++G+ L      + R  +    + +   YI 
Sbjct: 8   QFNLELFIKIIPQLIDGSILTIKITVFSIIIGLFLGTILG-MGRISYNIVYRYISSFYIE 66

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV I + Y           F           + +  +AL   + A++ EI+
Sbjct: 67  F--VRGTPLLVQIMIIY-----------FGLPSFGINLSAYTAGILALGLNSGAYVGEII 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           ++G+++V  GQMEAA +LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL   + 
Sbjct: 114 KAGILSVHVGQMEAARSLGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIA 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L  VG  I + T  A   +L     YL +++ ++  +  +  +  +  
Sbjct: 174 IVELTRVGKQIYSSTYNAWTPLLGVALFYLIMTLPLSKLVQHIENRWKIDR 224



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  +    +I    +GT++G GR+S N +  +I   Y+E  R  P LV I  +
Sbjct: 21  LIDGSILTIKITVFSIIIGLFLGTILGMGRISYNIVYRYISSFYIEFVRGTPLLVQIMII 80

Query: 149 YKSVLSVLPI 158
           Y  + S    
Sbjct: 81  YFGLPSFGIN 90


>gi|50842087|ref|YP_055314.1| ABC-type transporter, permease component [Propionibacterium acnes
           KPA171202]
 gi|289425866|ref|ZP_06427620.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|50839689|gb|AAT82356.1| ABC-type transporter, permease component [Propionibacterium acnes
           KPA171202]
 gi|289153809|gb|EFD02516.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|313763968|gb|EFS35332.1| conserved hypothetical protein [Propionibacterium acnes HL013PA1]
 gi|313791624|gb|EFS39742.1| conserved hypothetical protein [Propionibacterium acnes HL110PA1]
 gi|313802291|gb|EFS43517.1| conserved hypothetical protein [Propionibacterium acnes HL110PA2]
 gi|313812555|gb|EFS50269.1| conserved hypothetical protein [Propionibacterium acnes HL025PA1]
 gi|313814905|gb|EFS52619.1| conserved hypothetical protein [Propionibacterium acnes HL059PA1]
 gi|313828070|gb|EFS65784.1| conserved hypothetical protein [Propionibacterium acnes HL063PA2]
 gi|313839057|gb|EFS76771.1| conserved hypothetical protein [Propionibacterium acnes HL086PA1]
 gi|314914998|gb|EFS78829.1| conserved hypothetical protein [Propionibacterium acnes HL005PA4]
 gi|314918672|gb|EFS82503.1| conserved hypothetical protein [Propionibacterium acnes HL050PA1]
 gi|314920477|gb|EFS84308.1| conserved hypothetical protein [Propionibacterium acnes HL050PA3]
 gi|314932151|gb|EFS95982.1| conserved hypothetical protein [Propionibacterium acnes HL067PA1]
 gi|314954583|gb|EFS98989.1| conserved hypothetical protein [Propionibacterium acnes HL027PA1]
 gi|314958618|gb|EFT02720.1| conserved hypothetical protein [Propionibacterium acnes HL002PA1]
 gi|314962350|gb|EFT06451.1| conserved hypothetical protein [Propionibacterium acnes HL082PA1]
 gi|314968220|gb|EFT12319.1| conserved hypothetical protein [Propionibacterium acnes HL037PA1]
 gi|315077436|gb|EFT49496.1| conserved hypothetical protein [Propionibacterium acnes HL053PA2]
 gi|315080180|gb|EFT52156.1| conserved hypothetical protein [Propionibacterium acnes HL078PA1]
 gi|315098943|gb|EFT70919.1| conserved hypothetical protein [Propionibacterium acnes HL059PA2]
 gi|315100816|gb|EFT72792.1| conserved hypothetical protein [Propionibacterium acnes HL046PA1]
 gi|315107245|gb|EFT79221.1| conserved hypothetical protein [Propionibacterium acnes HL030PA1]
 gi|315108034|gb|EFT80010.1| conserved hypothetical protein [Propionibacterium acnes HL030PA2]
 gi|327450117|gb|EGE96771.1| hypothetical protein HMPREF9581_02565 [Propionibacterium acnes
           HL087PA3]
 gi|327455156|gb|EGF01811.1| hypothetical protein HMPREF9584_01111 [Propionibacterium acnes
           HL092PA1]
 gi|327455329|gb|EGF01984.1| hypothetical protein HMPREF9586_01365 [Propionibacterium acnes
           HL083PA2]
 gi|328752782|gb|EGF66398.1| hypothetical protein HMPREF9579_02325 [Propionibacterium acnes
           HL087PA1]
 gi|328759296|gb|EGF72912.1| hypothetical protein HMPREF9588_00140 [Propionibacterium acnes
           HL025PA2]
          Length = 182

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 1/144 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +    V     +  I L     A++AEI RSGL +V  GQ EAA ALG+      R
Sbjct: 7   QFASVETEKVVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMR 66

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
             ++PQAMR IIPP  ++ + +LK +SL +A+ F  DL      I N T   I ++++  
Sbjct: 67  RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
             YL ++ ++ +  + L       
Sbjct: 127 CWYLVMTSVLMIGQHFLEQYFGRG 150


>gi|45443739|ref|NP_995278.1| putative amino acid transport system permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|45438609|gb|AAS64155.1| putative amino acid transport system permease [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 269

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   V S + G+  ++  T L        G    +L       
Sbjct: 28  WRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGFF 87

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 88  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 137

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 138 MAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 197

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 198 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 242


>gi|317401659|gb|EFV82284.1| hypothetical protein HMPREF0005_00749 [Achromobacter xylosoxidans
           C54]
          Length = 229

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 104/230 (45%), Gaps = 11/230 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  L     +  T T+       V    LG VL++      R      G           
Sbjct: 10  GSALPYLFQTGMTFTLTLTLLAAVMGLALGTVLAMMRLSRFRILSVPAG----------I 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVR 286
            +  + ++ L+ + +  +F  P +  +     + +    F S  +  + + AA+  EI+R
Sbjct: 60  YVNVMRSVPLLLVIFWFYFLVPYIAAWIVGSPTPLRVGAFNSAVVTFTLFEAAYFCEIMR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ+ A++ALGL H +  R V+LPQA+R+++P L ++ + L +++SL   +  
Sbjct: 120 AGIQSIARGQVSASMALGLNHWQGMRYVILPQAIRNMVPALLTRVIILFQDTSLVYVLSL 179

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D +     I  + G+ +E+ L    +Y  +    +  + RL  ++ +  
Sbjct: 180 TDFLGAAAKIGQRDGRLVELYLFVAVVYFVICFTASRLVKRLEKRVRVLR 229



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 33/71 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T  L     +    +GT++   RLS  ++++    +YV V R++P L+VIF+ 
Sbjct: 17  FQTGMTFTLTLTLLAAVMGLALGTVLAMMRLSRFRILSVPAGIYVNVMRSVPLLLVIFWF 76

Query: 149 YKSVLSVLPIP 159
           Y  V  +    
Sbjct: 77  YFLVPYIAAWI 87


>gi|167564082|ref|ZP_02356998.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia oklahomensis EO147]
 gi|167571224|ref|ZP_02364098.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia oklahomensis C6786]
          Length = 225

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           +I   + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGALPTLWTGAIITLQITALAIVVGIVWGTLL-ALMRLSGVKPLAWFAQGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQLLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ A+ ALG+ + +A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNASFALGMNYAQAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G ++E+IL     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTSVEMILFAGACYFVVCSVASALVKGLQKKVTR 225



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAIITLQITALAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  +
Sbjct: 76  FLIVPQL 82


>gi|59712141|ref|YP_204917.1| amino-acid transporter permease [Vibrio fischeri ES114]
 gi|59480242|gb|AAW86029.1| predicted amino-acid transporter permease [Vibrio fischeri ES114]
          Length = 365

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 109/238 (45%), Gaps = 16/238 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLY 223
           F ++     L      +     I +   ++GIV+SL    A  L R       +++  +Y
Sbjct: 138 FLLYGGVFDLPVVDTHLWGGLLITLVIAIVGIVVSLPIGVALALGRRSEMPIIRSMCTVY 197

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  +    L T++ +A           +    F+       +     I +  ++AA++AE
Sbjct: 198 IEIWRGVPLITVLFMA----------SVMLPLFLSEGMELDKLFRALIGVVLFSAAYMAE 247

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR GL A+P+GQ EAA ALGL + K  RL++LPQA++  IP + + ++ L K++SL + 
Sbjct: 248 VVRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNTFIGLFKDTSLVLI 307

Query: 344 VGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  D++ +G          G + E  +    ++      ++ +   L  K+    K+
Sbjct: 308 IGMFDVLGIGQAANTDPEWLGFSTESYVFVALVFWVFCFSMSRYSIYLENKLHTGHKR 365



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 7/200 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +A  G++ +  IG  +  GR S   ++  +C VY+E++R +P L+ + F+
Sbjct: 154 LWGGLLITLVIAIVGIVVSLPIGVALALGRRSEMPIIRSMCTVYIEIWRGVP-LITVLFM 212

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLF 203
              +L +       +   F   +     S   +       +             + L  +
Sbjct: 213 ASVMLPLFLSEGMELDKLFRALIGVVLFSAAYMAEVVRGGLQAIPKGQYEAADALGLGYW 272

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
                    +     +P +  +   +F   +LVLI   +  L   +       ++G ST 
Sbjct: 273 KKMRLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFSTE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
           S  F++L   + C++ +  +
Sbjct: 333 SYVFVALVFWVFCFSMSRYS 352


>gi|330975708|gb|EGH75774.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 365

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + +V  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFPRKAVYGIAFLVIYPVVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|330962157|gb|EGH62417.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 365

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFPRKAVYGICFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|317014349|gb|ADU81785.1| amino acid ABC transporter, permease protein (yckJ) [Helicobacter
           pylori Gambia94/24]
          Length = 237

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+   ++ IV++L      + F  +   A    Y+S  LI G P LV I + + 
Sbjct: 41  PLAVISFILGLLIAIVVALIKIAPPKRFIYRALLAGVNFYVS--LIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|307130609|ref|YP_003882625.1| glutamine ABC transporter membrane protein [Dickeya dadantii 3937]
 gi|306528138|gb|ADM98068.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Dickeya dadantii 3937]
          Length = 219

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 99/188 (52%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P ++ I     ++F  P++        S      
Sbjct: 42  FARVYGGWFSNRIALVFIE--VIRGTPMVIQIM---YIYFALPMMLT------SVRIDPV 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  I +   + A+IAEI R  ++++ +G  EA +ALGL+HR   R V+ P A+R ++PP
Sbjct: 91  TAAIITIMINSGAYIAEITRGAVLSIHKGFTEAGLALGLSHRATLRHVITPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G ++L      II    +A+EI+     IYL +++++ + M 
Sbjct: 151 LGNQWIISIKDTSLCIVIGVSELTRQAQEIIAGNFRALEILTATAIIYLVITLVLTIGMR 210

Query: 387 RLNAKIAL 394
            L  ++ +
Sbjct: 211 WLERRLKI 218


>gi|254465169|ref|ZP_05078580.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacterales bacterium Y4I]
 gi|206686077|gb|EDZ46559.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacterales bacterium Y4I]
          Length = 244

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 2/203 (0%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            + +  ++ +L +   +      +  A   L +    + G P L  + L +        L
Sbjct: 24  LTLLGALIAALVSPAFALIRVHVSPVAQAPLRLYVSFMRGTPILAQLFLIFYGSGQFRPL 83

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            Q   +      P F    +A +  + A+  EI+R G++ VPRG++EAA A+G++   A 
Sbjct: 84  LQEWGLWTFFRDP-FNCALLAFALNSTAYQTEILRGGILGVPRGEIEAAKAIGMSRFTAL 142

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+ P A R   P L ++ + L+K S+LA  V   D++     I ++T     + L   
Sbjct: 143 RRVVFPHAYRIAWPALGNEVILLMKASALASVVTVFDVMGRTRQIFSKTFD-FSVYLWAA 201

Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394
            IYL ++ +  L   +   +++ 
Sbjct: 202 LIYLCITAVFVLLWRQAERRLSR 224



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 39/115 (33%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G + T  L   G + A ++       R+  + +     R+YV   R  P L 
Sbjct: 9   QYWPRLLDGTLMTIKLTLLGALIAALVSPAFALIRVHVSPVAQAPLRLYVSFMRGTPILA 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            +F ++       P+     +  F     N  L    L         +   +LG+
Sbjct: 69  QLFLIFYGSGQFRPLLQEWGLWTFFRDPFNCALLAFALNSTAYQTEILRGGILGV 123


>gi|197335791|ref|YP_002156347.1| general L-amino acid transport system permease protein AapM [Vibrio
           fischeri MJ11]
 gi|197317281|gb|ACH66728.1| general L-amino acid transport system permease protein AapM [Vibrio
           fischeri MJ11]
          Length = 365

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 110/238 (46%), Gaps = 16/238 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLY 223
           F ++    GL      +     I +   ++GIV+SL    A  L R       +++  +Y
Sbjct: 138 FLLYGGVFGLPVVDTHLWGGLLITLVIAIVGIVVSLPIGVALALGRRSEMPIIRSMCTVY 197

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  +    L T++ +A           +    F+       +     I +  ++AA++AE
Sbjct: 198 IEIWRGVPLITVLFMA----------SVMLPLFLSEGMELDKLFRALIGVVLFSAAYMAE 247

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR GL A+P+GQ EAA ALGL + K  RL++LPQA++  IP + + ++ L K++SL + 
Sbjct: 248 VVRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNTFIGLFKDTSLVLI 307

Query: 344 VGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  D++ +G          G + E  +    ++      ++ +   L  K+    K+
Sbjct: 308 IGMFDVLGIGQAANTDPEWLGFSTESYVFVALVFWVFCFSMSRYSIYLENKLHTGHKR 365



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 7/200 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +A  G++ +  IG  +  GR S   ++  +C VY+E++R +P L+ + F+
Sbjct: 154 LWGGLLITLVIAIVGIVVSLPIGVALALGRRSEMPIIRSMCTVYIEIWRGVP-LITVLFM 212

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-----FVLGIVLSLF 203
              +L +       +   F   +     S   +       +             + L  +
Sbjct: 213 ASVMLPLFLSEGMELDKLFRALIGVVLFSAAYMAEVVRGGLQAIPKGQYEAADALGLGYW 272

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
                    +     +P +  +   +F   +LVLI   +  L   +       ++G ST 
Sbjct: 273 KKMRLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFSTE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
           S  F++L   + C++ +  +
Sbjct: 333 SYVFVALVFWVFCFSMSRYS 352


>gi|282890142|ref|ZP_06298673.1| hypothetical protein pah_c013o049 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499993|gb|EFB42281.1| hypothetical protein pah_c013o049 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 250

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 20/262 (7%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF--V 191
            ++  I     +      +  +     +S    +      R L                +
Sbjct: 4   SIWHKISLFFQLSLAIVLLALLCYTVFYSQAYDWSSVWEYRELFLKGWLNTVYLSGICLI 63

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            S ++G + +      S+       + L   YI    I G P LV I + Y +       
Sbjct: 64  LSLIIGCIAAF-----SKLSAIPFFRYLATGYIEF--IRGTPLLVQILVFYYV------- 109

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     +    +   ++LS ++ A+IAE++R+G+ ++   Q+E+A A+ LT  +  
Sbjct: 110 ----VAHAVGLENRLIVGVLSLSLFSGAYIAEMIRAGIESISSTQLESARAICLTPFQTY 165

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++ PQA+   +PPL  Q+ +++K+SSL   +G  +L +    I + T   +E      
Sbjct: 166 RFIIFPQAVSQTLPPLAGQFASIIKDSSLLSIIGINELTNTAQQINSATYSTLESFFPLA 225

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
             YL L++ I+L   +L  +  
Sbjct: 226 LGYLVLTLPISLLSKKLEERFR 247



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 1/164 (0%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             ++S   Y    L G++NT +L+   +I + IIG +    +LSA     ++   Y+E  
Sbjct: 35  YDWSSVWEYRELFLKGWLNTVYLSGICLILSLIIGCIAAFSKLSAIPFFRYLATGYIEFI 94

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFV 195
           R  P LV I   Y  V   + + +  IV    +   +   ++        +         
Sbjct: 95  RGTPLLVQILVFYYVVAHAVGLENRLIVGVLSLSLFSGAYIAEMIRAGIESISSTQLESA 154

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             I L+ F T     F +   + LP L      I    +L+ I 
Sbjct: 155 RAICLTPFQTYRFIIFPQAVSQTLPPLAGQFASIIKDSSLLSII 198


>gi|330873113|gb|EGH07262.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330963201|gb|EGH63461.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 365

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + +V  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFPRKAVYGICFLVIYPVVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + +A  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRAMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLEHKLDTGHKR 365



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 13/202 (6%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F   
Sbjct: 155 WGGLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSS 214

Query: 150 KSVLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
             +   +P   +          V+ F        +      +         +  LG   +
Sbjct: 215 VMLPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRA 274

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGS 260
           +    L +         +P +  +   +F   +LV+I   +  L+  K       ++G +
Sbjct: 275 MGLVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMA 330

Query: 261 TVSPEFMSLYIALSCYTAAFIA 282
           T    F +L   + C+  +  +
Sbjct: 331 TEGYVFAALVFWIFCFGMSRYS 352


>gi|160895677|ref|YP_001561259.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160361261|gb|ABX32874.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 217

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 14/199 (7%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           FVLG    L     +R    +  + L   YI  F     P L+ + + +           
Sbjct: 29  FVLGGATGLLVL-FARVGRSQNLRRLAKAYIQAF--QNTPLLMQMFIVF----------- 74

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F           + +  I L+ YT+A++AE+ R  + ++P GQ EA+ +L + + +  R 
Sbjct: 75  FGSSMAGLDISPWTAAAIGLTLYTSAYLAEVWRGCVESIPSGQWEASSSLAMGYLQQMRH 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA+R  I P     + ++K +++A  +GF++L  +G  + N T Q   I  +    
Sbjct: 135 VVLPQALRLSIAPTVGFSVQIIKGTAVASIIGFSELTKLGSMLANATFQPFLIYGLVAAG 194

Query: 374 YLSLSIMIALFMNRLNAKI 392
           Y  L   ++L+ + L  K+
Sbjct: 195 YFLLCWPLSLYASHLEKKL 213


>gi|330957237|gb|EGH57497.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 231

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 3/181 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F   +     F +  
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNGMRALGELFGIPNLALSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      ++ T +A    ++   +YL L+++  + M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVSFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEK 220

Query: 391 K 391
           +
Sbjct: 221 R 221


>gi|260776170|ref|ZP_05885065.1| histidine ABC transporter permease protein HisM [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607393|gb|EEX33658.1| histidine ABC transporter permease protein HisM [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 225

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 9/217 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T A +   + ++G+ +++    ++R+            +I  F   G P L
Sbjct: 10  LPIYLDGLWTTAWLVGLALIIGLCVAIPLG-VARNSTNYLINGPSWAFIYFF--RGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y        + QF  +  +     +    +A    T+A+ AEI+R  +  +P+G
Sbjct: 67  VQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFVLNTSAYTAEIIRGSINGLPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           ++EAA A G+      R ++LP A+R  +P  +++ + +L  S++A  V   DL      
Sbjct: 121 EVEAAKAYGMGTFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTIVDLTGAARL 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++     E  L     Y++L+ MI         + 
Sbjct: 181 VNSRYYAPFESFLTAGLFYMALTFMILWCFKLAEKRF 217



 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    +I    +   +G  R S N L+      ++  FR  P LV ++ +
Sbjct: 13  YLDGLWTTAWLVGLALIIGLCVAIPLGVARNSTNYLINGPSWAFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y  +    P+ D      + 
Sbjct: 73  YYGMDQFFPVKDTLWENAWF 92


>gi|187929542|ref|YP_001900029.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|309781683|ref|ZP_07676416.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia
           sp. 5_7_47FAA]
 gi|187726432|gb|ACD27597.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|308919324|gb|EFP64988.1| glutamate/aspartate ABC transporter, permease protein [Ralstonia
           sp. 5_7_47FAA]
          Length = 231

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 122/235 (51%), Gaps = 7/235 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  M L+ +   +       + K+ V +FVL + L++    L R       +++  
Sbjct: 1   MPHFDLSMLLSGQYHQWLVSGFFLSIKLSVLAFVLALPLAI-TVALLRLAPVALLRSIGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            Y+    I  +P L  +   Y   F  P +L +F      +++ E  S  IAL  YTAA+
Sbjct: 60  TYVEA--IRNVPLLAHMLFWY---FGAPQILPEFIRDWLYSMNYEAASAVIALVLYTAAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE +RSG+ ++P+ Q+EA+ ALGL+  +A RLV+LPQ++R  +PPL SQ LNL KNSS+
Sbjct: 115 MAEDIRSGIRSIPKEQLEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSI 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A+ +G A+L+     + + T +  E        YL++SI I +F      +  ++
Sbjct: 175 AMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLTISIAITVFSAWYQHRYPVR 229



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 34/86 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GF  +  L+    + A  +   V   RL+   L+  I + YVE  RN+P 
Sbjct: 11  SGQYHQWLVSGFFLSIKLSVLAFVLALPLAITVALLRLAPVALLRSIGQTYVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L  + F Y     +LP      +   
Sbjct: 71  LAHMLFWYFGAPQILPEFIRDWLYSM 96


>gi|330970135|gb|EGH70201.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. aceris str. M302273PT]
          Length = 246

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVEQRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|312602224|ref|YP_004022069.1| Amino acid ABC transporter permease [Burkholderia rhizoxinica HKI
           454]
 gi|312169538|emb|CBW76550.1| Amino acid ABC transporter permease protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 242

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             L    +T+   A + V + V G  L++  +  +R        +    +  PLL    F
Sbjct: 14  WLLQGFGVTLALAATVIVTATVSGFALAMAHSADARLVRRVAAAYVLVFRNSPLLVQLMF 73

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG  TL+   L   L  + P   Q   +       EF++ +I L+ Y+ AF+ E  R+
Sbjct: 74  WYFGAATLLPDGLMQWL--NAPHAFQVGALSLRWPPFEFVAGWIGLTFYSCAFVGEEFRA 131

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL  V  GQ +AA ALGLT  +A R V+LPQA R+ +PPL  QY+N++KNSSL +A+G A
Sbjct: 132 GLRGVSGGQRQAAAALGLTRWQAFRHVVLPQAARNAMPPLFGQYMNIVKNSSLTMAIGLA 191

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +      +   +Y+    +I    + +  +
Sbjct: 192 ELSYASRQVETETFKTFAAFGVATALYIGTIAVIEALAHVVQRR 235



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 39/86 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +  +  Y   +L GF  T  LA + ++ AT+ G  +     +  +LV  +   YV VFR
Sbjct: 4   EWILEPKYVGWLLQGFGVTLALAATVIVTATVSGFALAMAHSADARLVRRVAAAYVLVFR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI 163
           N P LV + F Y    ++LP      
Sbjct: 64  NSPLLVQLMFWYFGAATLLPDGLMQW 89


>gi|242238547|ref|YP_002986728.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130604|gb|ACS84906.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 224

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI + + V+GIV       + R    K       +Y
Sbjct: 1   MYQFDWSSIPPSLPYLMQGMGVTLKITLTAVVIGIVWGTVL-AVMRLSPVKPVSWFARIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSIP---LVMVLLWFYL--IVPSFLQNVLGLSPKTDIRLVSAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +LV+LPQA R++IP L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQASAALALGMTHWQSMQLVILPQAFRAMIPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +SI  ++ +N L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISISASMLVNYLKRR 222



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 41/78 (52%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G   T  +  + ++   + GT++   RLS  K V+W  R+YV +FR
Sbjct: 5   DWSSIPPSLPYLMQGMGVTLKITLTAVVIGIVWGTVLAVMRLSPVKPVSWFARIYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           +IP ++V+ + Y  V S 
Sbjct: 65  SIPLVMVLLWFYLIVPSF 82


>gi|330965185|gb|EGH65445.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 246

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVEQRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|149376722|ref|ZP_01894480.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
 gi|149358961|gb|EDM47427.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
          Length = 361

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 16/263 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P  +  F  +  L +  +    IV  F +     GL     +      + +    +GI+ 
Sbjct: 108 PQFIERFPGRKWLGLFGLTGLPIVGYFLIPGGLFGLEEVQSSKWGGLMLTLILAYIGIIA 167

Query: 201 SLFAT---RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           SL       L R       + L +++I  +    L T VL      L    P    F   
Sbjct: 168 SLPIGTLLALGRRSEMPIIRGLCVVFIEVWRAVPLIT-VLFMASVMLPLFLPEGMNFE-- 224

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  +     I ++ + +A++AE++R GL A+PRGQ EAA ALGL + K   L++LP
Sbjct: 225 -------KLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAASALGLGYWKKMGLIILP 277

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIY 374
           QA++ +IP + + +++L K+++L + +G  D++    + +        A+E  +   F +
Sbjct: 278 QALKLVIPGIVNTFISLFKDTTLVLIIGLFDILGTVQSTVTDPAWQNVAVEGYVFVAFCF 337

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
                 I+ +   L  K+    +
Sbjct: 338 WVFCFGISRYSQNLERKLDTGHR 360



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 38/69 (55%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  LA+ G+I +  IGTL+  GR S   ++  +C V++EV+R +P + V+F   
Sbjct: 151 WGGLMLTLILAYIGIIASLPIGTLLALGRRSEMPIIRGLCVVFIEVWRAVPLITVLFMAS 210

Query: 150 KSVLSVLPI 158
             +   LP 
Sbjct: 211 VMLPLFLPE 219


>gi|330954815|gb|EGH55075.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 231

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F         F +  
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGICFGAYATELFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++    M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVLAMAGMYFLEK 220

Query: 391 KIALK 395
           + +  
Sbjct: 221 RASRG 225


>gi|300309584|ref|YP_003773676.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300072369|gb|ADJ61768.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 215

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +  + L   +I   LI G P LVL+ + +              + G        +
Sbjct: 38  RVSALRPLRRLAAAWIQ--LIQGTPLLVLMGVCFYGP----------ALAGVGTVEALPA 85

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              A+  YT+AF+ EI R  + +V + Q EAA  +GL+  +  R+++LPQA+R   PP  
Sbjct: 86  AATAMLIYTSAFLGEIWRGCIQSVHKSQWEAAECIGLSRWQRMRMIVLPQALRMATPPTV 145

Query: 329 SQYLNLLKNSSLAV-AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
              + ++KN+S+A   +GFA+L      + N T Q          +Y ++   ++ +   
Sbjct: 146 GFAVQVIKNTSVASLVIGFAELSYNAKVLNNSTFQPFLYFGSAALLYFAMCYPLSRWSRA 205

Query: 388 LNAKIALKEK 397
           L  K+    +
Sbjct: 206 LERKLHAHRR 215


>gi|295677662|ref|YP_003606186.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295437505|gb|ADG16675.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 225

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T        VF  + G +L++F     R    K  +     Y++ F       L
Sbjct: 17  WTGAIITFKITLIAIVFGIIWGTILAMF-----RLSSVKPLEWFAKGYVTLFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P + Q      + +     S  +A S + AA+ +EI+R+G+ AVPRG
Sbjct: 69  VMVLLWFFL--IVPQVLQSVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ AA ALG+T+ ++ RL++LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNAAFALGMTYGQSMRLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G  +E++L    +Y  + ++ +  +  L  K+A 
Sbjct: 187 IGDRDGTNVEMVLFAGAVYFVICVIASSLVKGLQKKVAR 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   I GT++   RLS+ K + W  + YV +FR+IP ++V+ + 
Sbjct: 16  LWTGAIITFKITLIAIVFGIIWGTILAMFRLSSVKPLEWFAKGYVTLFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|302545137|ref|ZP_07297479.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462755|gb|EFL25848.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           himastatinicus ATCC 53653]
          Length = 216

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 18/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   + +F LG+V ++     SR                T  I   P LV +   + +  
Sbjct: 27  ALGSILAFALGLVWAMAFRSPSRFVKWPVAAV-------TEFIRNTPLLVQLFFFFYV-- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IAL  + + + AE+ R+G+  VP GQ EAA AL L+
Sbjct: 78  ---------LPTWDIKFSALTTGVIALGLHYSTYTAEVYRAGIDGVPVGQWEAATALSLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  + V+LPQA+R ++P L +  + +LK+S +   +G  D++       + +   IE 
Sbjct: 129 RGRTWQAVILPQAIRRVVPALGNYVIAMLKDSPMLALIGVVDMLQKARGEASSSFHYIEP 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    ++ ++   +L M  L  ++ 
Sbjct: 189 FTMVGIAFILIAYPASLLMRALERRLG 215



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +     +   +  G + T      G I A  +G +      S ++ V W      E  R
Sbjct: 4   DWDVARDFLPQLGHGLLITLEATALGSILAFALGLVWAMAFRSPSRFVKWPVAAVTEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH 161
           N P LV +FF +  + +       
Sbjct: 64  NTPLLVQLFFFFYVLPTWDIKFSA 87


>gi|213966878|ref|ZP_03395028.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301381561|ref|ZP_07229979.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302061683|ref|ZP_07253224.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302131520|ref|ZP_07257510.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213928200|gb|EEB61745.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 233

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 62/195 (31%), Positives = 102/195 (52%), Gaps = 9/195 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                  +   + + L L + RL+ + + +   A  + Y        +PTLV + L Y  
Sbjct: 27  MQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYH-----RNVPTLVQLMLWY-- 79

Query: 245 HFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            F  P +L +   I  S  S E++   IAL    AA+ +E +RSGL A+P GQ+EA+ AL
Sbjct: 80  -FGIPTLLSESTQIWLSGYSTEYLFSVIALGLCQAAYFSEDIRSGLRAIPAGQVEASRAL 138

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + ++ R V+LPQ +R+ +P L +  + L KN+SL +A+G  +L      + N T + 
Sbjct: 139 GLGYVRSMRYVILPQGVRNCLPSLINHTVLLFKNTSLVMAIGVVELTYATREVENYTFRI 198

Query: 364 IEIILIWMFIYLSLS 378
            E  L+   +YL++S
Sbjct: 199 FEAYLVATVVYLAIS 213



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  I+ G   T  LAF     A  +  L+ + RL+ NK    +   YV   RN+P LV 
Sbjct: 15  YAEVIVKGIETTMQLAFVAWCMAMAVALLLVSIRLTGNKYAERLVAGYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           +   Y  + ++L       +  + 
Sbjct: 75  LMLWYFGIPTLLSESTQIWLSGYS 98


>gi|156973841|ref|YP_001444748.1| ABC transporter permease protein [Vibrio harveyi ATCC BAA-1116]
 gi|156525435|gb|ABU70521.1| hypothetical protein VIBHAR_01551 [Vibrio harveyi ATCC BAA-1116]
          Length = 246

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ V S +L ++L +    L++    K  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  VTIEVAVLSLLLAMILGMLG-ALAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINETLNEWFTASDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV +G++EAA A G++   + R VLLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDKGELEAAKAYGMSPLMSFRRVLLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V +       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLEDMVRMSSLAAGTTKMPFTFYMAVAIIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A I+G L    +L+  K    I  +Y  + R IP LV+
Sbjct: 7   YEASILKGALVTIEVAVLSLLLAMILGMLGALAKLAPYKWARAIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFTASDPNHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|297380137|gb|ADI35024.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Helicobacter pylori v225d]
          Length = 237

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 41  PLAIVSFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFLQALKVATPSLSNTFISLFKETSLASVVTIAEIFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|91785180|ref|YP_560386.1| His/Glu/Gln/Arg/opine ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91689134|gb|ABE32334.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia xenovorans
           LB400]
          Length = 225

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 6/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           KI + + V GI+       L R    K  +     Y++ F       L
Sbjct: 13  LPTLWTGAVVTLKITLIAIVFGIIWGTVLAML-RLSSFKPFEWFAKGYVTIFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P + Q      + +     S  +A S + AA+ +EI+R+G+ AVPRG
Sbjct: 69  VMVLLWFFL--IVPQVLQNVLGLSADIDIRLASAMVAFSLFEAAYYSEIIRAGIQAVPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ AA ALG+ + +A RL++LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNAAFALGMNYAQAMRLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G  IE++L     Y  + ++ +  +  L  K+A 
Sbjct: 187 IGDRDGTNIEMVLFAGACYFVVCVIASSLVKGLQKKVAR 225



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  +    ++   I GT++   RLS+ K   W  + YV +FR+IP ++V+ + 
Sbjct: 16  LWTGAVVTLKITLIAIVFGIIWGTVLAMLRLSSFKPFEWFAKGYVTIFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|317122273|ref|YP_004102276.1| polar amino acid ABC transporter inner membrane subunit
           [Thermaerobacter marianensis DSM 12885]
 gi|315592253|gb|ADU51549.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermaerobacter marianensis DSM 12885]
          Length = 370

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 18/216 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   SF LG+ L+L      R       +AL + YI   L+ G P +V++      
Sbjct: 170 LAVAGITLSFPLGVALAL-----GRVSSLPVVRALSIAYIE--LVRGTPLMVVLFF---- 218

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +     F+  +            L  +TAA++AE VR GL  VPRGQ+EAA ALG
Sbjct: 219 ----SMTALPLFLPPAVRPDLVTRAAAGLVLFTAAYVAEAVRGGLQGVPRGQIEAAQALG 274

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---G 361
           LT  +A  LV+LPQA+R++IP L  Q+++L K++SL    G  + V V  ++++     G
Sbjct: 275 LTGTQAVFLVVLPQALRAVIPALVGQFISLFKDTSLVAVWGLLEFVGVAQSVLSNPAYLG 334

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +E+      +Y      ++L   RL  ++ + E+
Sbjct: 335 RHVEVYAFVAAVYWVFCYGMSLASRRLERRLGVGER 370


>gi|306829228|ref|ZP_07462418.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304428314|gb|EFM31404.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 266

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 95/249 (38%), Gaps = 9/249 (3%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +   L  L        L        R +     T+       +F  VL +V ++      
Sbjct: 11  WYQSLMQLIPDGKLFSLRSVFDGIPRIVQQLPTTIMLTLSGAIFGLVLALVFAIVKINRV 70

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266
           +  +       PL       + G P LV + L Y       K +  Q+         P  
Sbjct: 71  KILY-------PLQAFFVSFLKGTPILVQLMLTYYGIPLALKALNQQWGTSFNINAIPAA 123

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               +A +   AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P 
Sbjct: 124 TFAIVAFAFNEAAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPT 183

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + L K +SLA + G  ++ +    +     +  E  +    +Y  ++I I     
Sbjct: 184 LINSLIGLTKGTSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGR 243

Query: 387 RLNAKIALK 395
            +  K+ + 
Sbjct: 244 FIEKKMQIS 252


>gi|289651582|ref|ZP_06482925.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 215

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++ L    + R   +   +    LYI  F  
Sbjct: 3   FTLWDILRNLLIGLQWTVALSLAAFIGGGLIGLLVMGM-RTSEKTGPRVTAKLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +L +T  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESISKGQWEASASLAMTPFEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHLERRL 211



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 36/107 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+ +  I   +IG LV   R S         ++Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTVALSLAAFIGGGLIGLLVMGMRTSEKTGPRVTAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|317492650|ref|ZP_07951077.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919400|gb|EFV40732.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 238

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 95/224 (42%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTF 227
           +    + L +      T   I ++  +  +V+                + + + +++ T+
Sbjct: 5   IHEYWKSLIWTDGFRFTGIAITLWLLIASVVMGGILAVFFSVARVSPKRWISMPVWLFTW 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + + Y   +   ++     +  +          +AL+  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLVFYSGMYTLEIVKGTEML-NAFFRSGLNCTLLALTLNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + AVP G++EAA A G +  K  R ++LP A+R+ +P  +++ + +L +++LA      
Sbjct: 124 AIRAVPHGEIEAANAYGFSRFKLYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+ V   I + T Q      I   +YL +S ++     +   +
Sbjct: 184 DLLKVARDINSATYQPFTAFGIAAVLYLIISYVLIRLFRKAEKR 227



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL  + ++   I+       R+S  + ++    ++  VFR  P  V +   Y
Sbjct: 20  FTGIAITLWLLIASVVMGGILAVFFSVARVSPKRWISMPVWLFTWVFRGTPLYVQLLVFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + ++  +    ++  F 
Sbjct: 80  SGMYTLEIVKGTEMLNAFF 98


>gi|319782302|ref|YP_004141778.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168190|gb|ADV11728.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 244

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 4/213 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A +   S ++G  L L    L R    +        Y + F   G P LV I L Y 
Sbjct: 17  WVTAALTFVSVLIGFNLGLGL-ALMRLSSNRFLSGFAKYYSNVF--RGTPLLVQIFLFYY 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               +    + N      +S       +AL+  TAA+ +EI+R GL++VP G +EAA A 
Sbjct: 74  -GLGQLSSIKDNAALWWLISDGARCAVLALALNTAAYTSEILRGGLMSVPVGLVEAAQAC 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++     R +  P A+R  +P   ++ + ++K +SLA  +   ++      +++QT   
Sbjct: 133 GMSRMLRFRRIEFPLAIRQALPAYGNELILVVKGTSLASTITVLEITGYAKRLMSQTFAI 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            EI  I   +YL +++++   +  +   +   E
Sbjct: 193 FEIFAIAGVLYLVINLLLIAIIRAIERFLMRHE 225



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 5/155 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  L F  ++    +G  +   RLS+N+ ++   + Y  VFR  P LV IF 
Sbjct: 11  VLLKGLWVTAALTFVSVLIGFNLGLGLALMRLSSNRFLSGFAKYYSNVFRGTPLLVQIFL 70

Query: 148 LYKSVLSVLPIPDHSIVLPFGMF----LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            Y  +  +  I D++ +                           +  + S  +G+V +  
Sbjct: 71  FYYGLGQLSSIKDNAALWWLISDGARCAVLALALNTAAYTSEILRGGLMSVPVGLVEAAQ 130

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           A  +SR    +  +  PL        +G   ++++
Sbjct: 131 ACGMSRMLRFRRIE-FPLAIRQALPAYGNELILVV 164


>gi|115350620|ref|YP_772459.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|172059653|ref|YP_001807305.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115280608|gb|ABI86125.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia ambifaria
           AMMD]
 gi|171992170|gb|ACB63089.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 225

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        +           KI + + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGAMPTLWSGAIVTFKITLIAIVVGIVWGTLL-ALMRLSGVKPLAWFAKAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P + Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQVLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQM AA ALG+ +  A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQMNAAFALGMNYAHAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       + ++ G  +E++L     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANVGDRDGTTVEMVLFAGACYFVICSVASALVKGLQKKVTR 225



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWSGAIVTFKITLIAIVVGIVWGTLLALMRLSGVKPLAWFAKAYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|330971239|gb|EGH71305.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 220

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y   ++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGTYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IAL +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIALLLRTLEQRLAIRR 220


>gi|292486752|ref|YP_003529622.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900846|ref|YP_003540215.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291200694|emb|CBJ47827.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552169|emb|CBA19206.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 368

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G ++  G+ P+        A+++G ++         +    + +L   G   
Sbjct: 78  WVFIHARFG-QLMYGLYPHELRWRINLALVIGLLS---------VIPMFVKSLPRRGS-- 125

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  + PL+V   +Y   L +  +                     T
Sbjct: 126 -----------YIVGWAVVYPLLVWLLMYGGWLGLERVETRQ-------------WGGLT 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +   GI+L+L      R       + L +L+I  +    L T++ ++ 
Sbjct: 162 LTLIIAAVGIAGALPTGILLAL-----GRRSQMPVVRTLCILFIEFWRGVPLITVLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   +   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 216 ---------SVMLPLFMAEGSSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 267 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 327 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFHTGR 365


>gi|254563287|ref|YP_003070382.1| glutamate and aspartate ABC transporter membrane protein
           [Methylobacterium extorquens DM4]
 gi|254270565|emb|CAX26568.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Methylobacterium extorquens DM4]
          Length = 240

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 71/227 (31%), Positives = 114/227 (50%), Gaps = 12/227 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS    T+ T    +  +F LG V+ +      R    +T  A+   Y+  F    +P
Sbjct: 24  MLLSGLAWTVVTALCSWAIAFTLGSVVGVM-----RTLPSRTANAIGAAYVEGF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + L Y   F  P L            P   F +  + L  +TAA +AE VR+G+ A
Sbjct: 77  LLVQMFLWY---FVLPELLPARLGAAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRA 133

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ +A +ALGLT  +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +
Sbjct: 134 LPRGQAQAGLALGLTWAQTYRAVLLPNAYRIILPPLTSEFLNNLKNTSVALTIGLLELTA 193

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   + Q  E       +Y++L++++      L  ++A+   +
Sbjct: 194 RARSMQEFSFQVFEAFTAATLLYVALNLVVIAGATLLERRVAVPGGR 240



 Score = 56.5 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 36/76 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA  +L G   T   A      A  +G++VG  R   ++    I   YVE FRN+P 
Sbjct: 18  AGTYADMLLSGLAWTVVTALCSWAIAFTLGSVVGVMRTLPSRTANAIGAAYVEGFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  +  +LP
Sbjct: 78  LVQMFLWYFVLPELLP 93


>gi|210631313|ref|ZP_03296856.1| hypothetical protein COLSTE_00741 [Collinsella stercoris DSM 13279]
 gi|210160080|gb|EEA91051.1| hypothetical protein COLSTE_00741 [Collinsella stercoris DSM 13279]
          Length = 399

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 2/189 (1%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F +  G     +Y  + ++ G P +V   + +   F    +        + +   F + 
Sbjct: 199 RFWKVVGSGFARVY--STVVRGTPMMVQAMIIFFGVFGLFKMTNLTTTQINAIWSTFTAG 256

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + +   + A++ E++R G+ +V  GQ EAA +LGL+  +A R V+ PQ ++  IP L++
Sbjct: 257 LVTIVLNSTAYMMEVLRGGIESVDAGQTEAARSLGLSQWEAMRTVVFPQGVKFAIPGLSN 316

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +  +K+SS+   +G  DL+    T+        E  L+   IYL L++  +  + R  
Sbjct: 317 ELVINIKDSSVLSVIGTFDLMFATTTVGGIYYAKFEAALVTSVIYLCLTMFASWLLGRFA 376

Query: 390 AKIALKEKK 398
            ++ +K  K
Sbjct: 377 NRLNVKSVK 385


>gi|171059883|ref|YP_001792232.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170777328|gb|ACB35467.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 216

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F          L       + + +F+ G V+ L    LSR       +    +Y+  F  
Sbjct: 4   FSLWDIFRNLLLAARWTVLLSLIAFIGGSVVGLALL-LSRLAQWPGAQRAVAVYVQVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y           F           +++  +AL+ Y +A++ EI R  +
Sbjct: 61  QGTPLLMQLFLAY-----------FGLALFGINVSAWVAAGLALTFYASAYLTEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+P+GQ EAA +L L+  +  R V+ PQA+R  +PP     + ++K ++LA  +GF +L
Sbjct: 110 MAIPKGQWEAADSLALSFGEKMRHVIGPQALRIAVPPTVGFLVQVIKGTALASVIGFIEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G  I N T +   +      +Y  L   ++ +  +L      + 
Sbjct: 170 TKAGTMITNATFRPFTVYACVAVMYFVLCWPVSAYARKLERSFKRER 216



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 32/106 (30%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    I  +++G  +   RL+          VYV+VF+  P L
Sbjct: 7   WDIFRNLLLAARWTVLLSLIAFIGGSVVGLALLLSRLAQWPGAQRAVAVYVQVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + +F  Y  +          +     +                 A 
Sbjct: 67  MQLFLAYFGLALFGINVSAWVAAGLALTFYASAYLTEIWRGCVMAI 112


>gi|110347171|ref|YP_665989.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283282|gb|ABG61342.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Chelativorans sp. BNC1]
          Length = 230

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 7/221 (3%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 M     +   + + GIVL      L R    K    L   Y++      + +L 
Sbjct: 16  YLFWDGMRFTLLLTALATIGGIVLGTLL-ALMRLSSIKALSTLAGGYVNL-----MRSLP 69

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           L+ + +  +F  P +G +       +    F S  I  + + AA+ +EI+R+G+ ++PRG
Sbjct: 70  LVLVIFWFYFLVPYIGAWLIGASQPIAVGAFASALITFTLFEAAYFSEIMRAGIQSIPRG 129

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  A  A+GL + +    ++LPQA R+++P + +Q + L +++SL   +   D +     
Sbjct: 130 QTGAGYAIGLNYSQVMGYIVLPQAFRNMLPVMLTQTIILFQDTSLVYVISLTDFLGAASK 189

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  + G+ +E+ L    IY  +S   +  + RL A+ A+  
Sbjct: 190 VAQRDGRLVEMYLFAAIIYFVISFAASFLVKRLEARTAIIR 230



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           +     F++    +PY            G   T  L     I   ++GTL+   RLS+ K
Sbjct: 1   MFYSFDFDVIARSLPYL--------FWDGMRFTLLLTALATIGGIVLGTLLALMRLSSIK 52

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            ++ +   YV + R++P ++VIF+ Y  V  +   
Sbjct: 53  ALSTLAGGYVNLMRSLPLVLVIFWFYFLVPYIGAW 87


>gi|289672220|ref|ZP_06493110.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 188

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 80/168 (47%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G+P L+ + L Y    +        F         F +  IAL     A+  E+ R 
Sbjct: 15  LVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFAAGVIALGICFGAYATEVFRG 74

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + ++ L+K+++L   +G  
Sbjct: 75  AILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVIGLE 134

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++      +  T QA    ++  F+YL L+++    M  L  + +  
Sbjct: 135 EIMRHAQIAVGFTKQAFTFYMVAAFMYLGLTVLAMAGMYFLEKRASRG 182


>gi|170697812|ref|ZP_02888898.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170137314|gb|EDT05556.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 218

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 11/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LI 229
            +   +      +    ++ VF  +LG+V       ++  F     KA+ +L      LI
Sbjct: 3   FDWSAIWAALPDLMDGVRLTVFIALLGLVGGFIVGMIAGMFRAYGPKAMNVLAQVYIELI 62

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V +     L+F  P+L      G         +  IA++  + A++AE+VR  L
Sbjct: 63  RGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGAL 112

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+G  EA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +G  +L
Sbjct: 113 LSIPKGLTEAGLAMGLSMPRVLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGEL 172

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              G  II    QA+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 173 TRKGQEIIAGNFQAVEIWSAVAIIYLILTGVMTLTLRLVEKRMKI 217


>gi|220924348|ref|YP_002499650.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948955|gb|ACL59347.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 230

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 109/225 (48%), Gaps = 11/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+  T T+   A   +   +LG ++++      R         +   Y++      +
Sbjct: 16  YLFLTGMTFTLTLTALAALGGVILGTLIAMM-----RLSGLPVAPVVAKGYVNF-----M 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            +L L+ + +  +F  P +GQ+       +    F S  +  + + AA+ +EI+R+G+ +
Sbjct: 66  RSLPLVLVIFWFYFLVPYIGQWLTGADRPIQVGAFTSSLVTFTLFEAAYFSEIMRAGIQS 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ  AA ALGLT+ ++   ++LPQA R+++P L +Q + L +++SL   +   D + 
Sbjct: 126 IPKGQSAAASALGLTYWQSMSNIILPQAFRNMLPVLLTQTIVLFQDTSLVYVLSITDFLG 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +  + G+ +E+ L    +Y  +    +  + RL  +IA+  
Sbjct: 186 AASKVAQRDGRLVEMYLFAAVVYFVICFFASTLVRRLQRRIAIIR 230


>gi|163748031|ref|ZP_02155353.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
 gi|161378691|gb|EDQ03138.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
          Length = 244

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 2/203 (0%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +F+   + +LF+  L+      +  A   L +    + G P L  + L Y         
Sbjct: 24  LTFMGAFIAALFSPGLALIRANTSPIAQAPLRLYISFMRGTPILGQLFLIYYGSGQFRPF 83

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            Q   + G    P F    +A +  + A+  EI+R G++ V RG++EAA A+G+T  +  
Sbjct: 84  LQDWGLWGFFRDP-FNCALLAFALNSTAYQTEILRGGIMGVARGEIEAAKAIGMTRLQIL 142

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V  P A R   P L ++ + L+K S+LA  V   D++     I ++T     I L   
Sbjct: 143 RRVTFPHAYRIAWPALGNEIILLMKASALASVVTVFDIMGRTRQIFSRTFD-FSIYLWAA 201

Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394
            IYL ++ +  L   +   +++ 
Sbjct: 202 LIYLCITAIFVLLWRQGETRLSR 224



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 57/205 (27%), Gaps = 7/205 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+     Y   +L G + T  L F G   A +    +   R + + +     R+Y+   R
Sbjct: 3   PFDIMIEYWPRLLDGTLMTLKLTFMGAFIAALFSPGLALIRANTSPIAQAPLRLYISFMR 62

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             P L  +F +Y       P      +  F     N  L    L         +   ++G
Sbjct: 63  GTPILGQLFLIYYGSGQFRPFLQDWGLWGFFRDPFNCALLAFALNSTAYQTEILRGGIMG 122

Query: 198 IVLSLFATRLS---RHFHEKTGKALPLLYISTFLIFGLPTLVLI----ALKYQLHFDKPV 250
           +         +              P  Y   +   G   ++L+           FD   
Sbjct: 123 VARGEIEAAKAIGMTRLQILRRVTFPHAYRIAWPALGNEIILLMKASALASVVTVFDIMG 182

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSC 275
             +  F      S    +  I L  
Sbjct: 183 RTRQIFSRTFDFSIYLWAALIYLCI 207


>gi|329297091|ref|ZP_08254427.1| Glutamine ABC transporter, permease subunit [Plautia stali
           symbiont]
          Length = 269

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 19/216 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V   + G++L+L     SR       +    LY   F       L ++ +   L  
Sbjct: 37  VATTVLGTLFGLILALMGISPSR-----WLRVPARLYTDLFRGL-PSILTILLIGQGLAR 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L       G T  P       ALS   +A++ EI RSG+ +V +GQMEA  ALG++
Sbjct: 91  FSYQLF------GPTPYPPL--GIFALSLIASAYMGEIFRSGIQSVEQGQMEACRALGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           + +A RLV++PQ +R ++P + +Q++ ++K+SSL   +G      +L  VG      +G 
Sbjct: 143 YGRAMRLVIIPQGIRRVLPAIVNQFIAIIKDSSLVYLLGLMTGQRELFRVGQDADVLSGN 202

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +++    YL +++ +   +N +N +     ++
Sbjct: 203 -LSPLMLAGLFYLVITVPLTHAVNYINVRYRTGRRR 237


>gi|171322526|ref|ZP_02911318.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171092141|gb|EDT37550.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 229

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 79/175 (45%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T LI G+P LVL+ L +                       F++  + L     A+  E
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNSATDALGWDQIDIDPFLAGVLVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   ++VPRGQ+EA  A G+T+ +    ++ PQ MR  +P + + +  L+K+++L   
Sbjct: 112 TFRGAFLSVPRGQLEAGSAYGMTNWQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     LI   +YL+++ +    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAITTISNFVLMWLEKRYSTGVRK 226


>gi|83718147|ref|YP_440543.1| glutamine ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|83651972|gb|ABC36036.1| glutamine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 230

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 13/234 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
             + + F        L   T  +     I  F    G ++ + A  + R +       L 
Sbjct: 9   RELNVQFDWSAIWAALPDLTDGVRLTVFIAFFGLAGGFLVGMIAG-MFRAYGPAALNVLT 67

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI   LI G P +V +     L+F  P+L      G         +  +A++  + A+
Sbjct: 68  QVYIE--LIRGTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAY 115

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR  L+++P+G  EA +A+GL+  +    ++ P A R +I PL +Q +  LK++SL
Sbjct: 116 LAEVVRGALLSIPKGVTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSL 175

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + +G  +L   G  II    QA+EI      IYL+L+ ++ L +  +  ++ +
Sbjct: 176 FIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLALTGVMTLTLRFVEKRMRI 229


>gi|82544788|ref|YP_408735.1| histidine transport, membrane protein M [Shigella boydii Sb227]
 gi|81246199|gb|ABB66907.1| histidine transport, membrane protein M [Shigella boydii Sb227]
 gi|320183763|gb|EFW58597.1| Histidine ABC transporter, permease protein HisM [Shigella flexneri
           CDC 796-83]
 gi|332093400|gb|EGI98458.1| histidine transport system permease protein hisM [Shigella boydii
           3594-74]
          Length = 238

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLILSVVIGGVLALFL-AIGRVSSNKYIQF--PIWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++    F+  +          +AL+  T A+  EI    + +V 
Sbjct: 71  LYVQLLVFYSGIYTLEIVKGTEFL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVL 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSTFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINAATYQPFTAFGIAAVLYLIISYVLISLFRRAEKR 227


>gi|323697541|ref|ZP_08109453.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323457473|gb|EGB13338.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 246

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 13/243 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKAL 219
            F              TM  +    V + +LGI++ +      + F        +  +  
Sbjct: 1   MFSGEPARWMWEGFCTTMQISTISLVSAMILGIIICILRMTPFKPFQWFSLAYTEFFRNT 60

Query: 220 PLLYISTFLIFGLPTLV------LIALKYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIA 272
           PLL    F   G   ++       +   Y        L    F+G     + EF+   IA
Sbjct: 61  PLLIQIFFWYNGAHVIIPEVINQWMNDLYYWFPGPFSLFGHQFVGEWVLFNVEFIMSIIA 120

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ YT+AFIAE +R+G+ ++P+ Q+EA+ A+GL+  +  R V+LPQA+R +IPPL SQ L
Sbjct: 121 LTVYTSAFIAEEIRAGIFSIPKNQLEASRAVGLSFLQGYRYVILPQALRIVIPPLISQAL 180

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NL+KNSSL + +G  DL+     I +      E   + + IYL++S++++  +   N   
Sbjct: 181 NLIKNSSLVMVLGVTDLMYQATQIESYHAMPFEAFTVALLIYLAISLVVSFCITMYNKHF 240

Query: 393 ALK 395
            ++
Sbjct: 241 MIQ 243



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 1/115 (0%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A  +  GF  T  ++   ++ A I+G ++   R++  K   W    Y E FRN P L+ I
Sbjct: 7   ARWMWEGFCTTMQISTISLVSAMILGIIICILRMTPFKPFQWFSLAYTEFFRNTPLLIQI 66

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           FF Y     ++P   +   +    +      S           +F   F++ I+ 
Sbjct: 67  FFWYNGAHVIIPEVINQW-MNDLYYWFPGPFSLFGHQFVGEWVLFNVEFIMSIIA 120


>gi|224367957|ref|YP_002602120.1| GltK1 [Desulfobacterium autotrophicum HRM2]
 gi|223690673|gb|ACN13956.1| GltK1 [Desulfobacterium autotrophicum HRM2]
          Length = 218

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 99/221 (44%), Gaps = 7/221 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N                +     +  I ++            +      + Y +T  I 
Sbjct: 1   MNFEWQVITHNFTFLMGGLLTTCELAVIAITGGLFLGILLGMARLSTIKAIYYPATLFIN 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            + T  LI + + L+F  P++             +F S  IA   + A++ AEI+R+G+ 
Sbjct: 61  LMRTQPLILVIFWLYFLMPLILG-------KPIGDFTSASIAFILFEASYFAEIIRAGIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G T+ +  R  ++PQA+++++P L +Q + + +++SLA  +G  + +
Sbjct: 114 SIPKGQAEAAYSSGFTYWQTMRYFIIPQALKNMLPSLITQGVVVFQDTSLAYVIGLREFL 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                +  +  ++ E+ L    +YL +   I+    R+  K
Sbjct: 174 RSANVVDAREMRSFELYLFVGLVYLLVCFSISRIGKRMELK 214


>gi|71737094|ref|YP_273400.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557647|gb|AAZ36858.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 365

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGIAFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F   
Sbjct: 155 WGGLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSS 214

Query: 150 KSVLSVLPI 158
             +   +P 
Sbjct: 215 VMLPLFMPE 223


>gi|70729726|ref|YP_259465.1| amino acid ABC transporter [Pseudomonas fluorescens Pf-5]
 gi|68344025|gb|AAY91631.1| amino acid ABC transporter [Pseudomonas fluorescens Pf-5]
          Length = 219

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 1/206 (0%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +  L   + LF              AL +LY    +   +  +  + +   L     +
Sbjct: 15  LLATGLWWTIVLFLCSSVLSLMAGIAFALIVLYTPKLVSLPIRFMTWLLMGTPLLLQLYL 74

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +       G  + P  M+  I LS + A + A+++R+G+++V  GQ+E A ++GL+  +A
Sbjct: 75  IYYGLVQVGIDI-PALMAGIIGLSLHFAVYNADVIRAGVLSVDPGQIEGARSIGLSRSQA 133

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V++PQA+RS + PL +  + LLK++SL   +G A+LV      +++T    E  L  
Sbjct: 134 QRYVIVPQALRSTLAPLGNNLIVLLKDTSLVSIIGIAELVYSAQRAVSETYSPFEFYLAV 193

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             IY ++++++   ++ L  K+ +  
Sbjct: 194 AVIYYAVNLVLEAGLHLLETKVEMSR 219


>gi|310814816|ref|YP_003962780.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753551|gb|ADO41480.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 216

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 14/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +    +     +   +  LG +       L R    K    L   ++   +I G P 
Sbjct: 8   HFIYLLNGLWWTIILSALAMSLGSIAGFIVM-LGRISRRKWLVRLSGTWVQ--IIQGTPL 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ + + Y           F         P   +  IA   Y +A++ EI R  + ++ +
Sbjct: 65  LIQMFIIY-----------FGLGVVGISVPALAAAAIATMIYASAYLGEIWRGCVQSIAK 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EAA ++GLT  +A R V+LPQAMR   PP     + L+KN+SLA  VGF +L     
Sbjct: 114 TQFEAAESMGLTRWQALRDVILPQAMRIATPPTVGFTVQLIKNTSLASVVGFLELTRAAQ 173

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I N   +   +  I   +Y ++   ++L+   L  K+ +  +
Sbjct: 174 VINNSLFEPFLVFGIAAALYFAVCYPLSLWSRNLERKLNVGRR 216



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 36/105 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L+   M   +I G +V  GR+S  K +  +   +V++ +  P L+ 
Sbjct: 8   HFIYLLNGLWWTIILSALAMSLGSIAGFIVMLGRISRRKWLVRLSGTWVQIIQGTPLLIQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +F +Y  +  V               +               +  
Sbjct: 68  MFIIYFGLGVVGISVPALAAAAIATMIYASAYLGEIWRGCVQSIA 112


>gi|307544385|ref|YP_003896864.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216409|emb|CBV41679.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 224

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            + R        A  +L+IS F   G P LV + L Y   +  P L  F      T    
Sbjct: 42  AVIRVLKIPGLNAATMLFISFF--RGTPLLVQLFLFY---YGLPQLLDF-----LTQING 91

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  + L+ + +A++AE +R+ ++ V R Q EAA+++G+T+ +  R ++LPQA R  +P
Sbjct: 92  ITATIMGLTLHFSAYMAESIRAAIVGVDRSQTEAALSIGMTNGQLMRRIVLPQATRVAVP 151

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +++++K +SLA  +G  +L+         +    E  +    +Y  +  ++A   
Sbjct: 152 TLMNYFIDMIKATSLAFTLGVTELMGATQKEAAGSFLYFEAFVTVAVVYWVIVELLAWGQ 211

Query: 386 NRLNAKIALKEKK 398
            RL  ++    ++
Sbjct: 212 RRLETRLNKAYRR 224


>gi|296272954|ref|YP_003655585.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296097128|gb|ADG93078.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 221

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F               +     I + S  L + LS+    + R++  K    +  LYI
Sbjct: 1   MNFDFVWFLNLFPIVLPALKLTISIALISLFLTLCLSILI-AIIRYYKVKGLYQIFGLYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F         L+A  + L+F  P +  F           + +  IAL+  T++F+AE 
Sbjct: 60  TFFRATP-----LVAQLFILYFGLPSIFPF-----LESMTAYEATVIALTLNTSSFMAED 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L ++ +GQ EA  ++G+T  +  + V+LPQA    +P + ++++ ++K ++L   V
Sbjct: 110 LRGALESIDKGQNEACYSMGMTKFQTMKRVILPQAFIFALPSIGNRFIGIIKGTALGFTV 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G AD+++        + +  E  L    IYL L I++   +  +  ++
Sbjct: 170 GLADIMAKSKIEAALSLRFFEAYLCVTIIYLVLVIIVERVLKYIEKRV 217



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 28/76 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L     T  +A   +     +  L+   R    K +  I  +Y+  FR  P +  +F LY
Sbjct: 16  LPALKLTISIALISLFLTLCLSILIAIIRYYKVKGLYQIFGLYITFFRATPLVAQLFILY 75

Query: 150 KSVLSVLPIPDHSIVL 165
             + S+ P  +     
Sbjct: 76  FGLPSIFPFLESMTAY 91


>gi|307728986|ref|YP_003906210.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583521|gb|ADN56919.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 229

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 76/175 (43%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T L+ G+P LVL+ L +                       F++    L     A+  E
Sbjct: 52  VYTTLVRGVPDLVLMLLLFYSIQIWLNNLTDMLGWEQIDIDPFVAGVAVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  ++K ++L   
Sbjct: 112 TFRGAFLAVPRGQLEAGAAYGMTSWQVFSRIMFPQMMRFALPGIGNNWQVMVKATALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     L+   IYL+++ +    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLLAGAIYLAITTVSNFVLMYLEKRYSTGVRK 226


>gi|172063792|ref|YP_001811443.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171996309|gb|ACB67227.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 219

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           K  V S  LG+V+ L    + R    +    L   Y+S  L+ G P
Sbjct: 9   HTLPVMVRGALLTLKFAVASMALGLVVGLVV-AIMRIGSNRLASGLAQGYVS--LMRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + + Y    D           G T+ P   +    L+    A+++E +R  ++ + 
Sbjct: 66  LLVQMFVVYYGLPDL----------GITLDPT-TAGIFTLTLNAGAYLSESMRGAILGIG 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA +LGLTH +  R ++ PQA+R  +P L +  ++L+K++SL   +   +L+   
Sbjct: 115 RGQWAAAHSLGLTHVQTLRYIVCPQALRLAVPSLGNTLISLIKDTSLVSVITVTELLRST 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I  T Q + + L    +Y  LS ++     R+  +++L
Sbjct: 175 QEVIAATFQPLPLYLAAAALYWVLSTLLTRLQGRVETRLSL 215



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 41/85 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G + T   A + M    ++G +V   R+ +N+L + + + YV + R  P LV +F 
Sbjct: 13  VMVRGALLTLKFAVASMALGLVVGLVVAIMRIGSNRLASGLAQGYVSLMRGTPLLVQMFV 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +  +    D +    F + LN
Sbjct: 73  VYYGLPDLGITLDPTTAGIFTLTLN 97


>gi|159905112|ref|YP_001548774.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C6]
 gi|159886605|gb|ABX01542.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C6]
          Length = 226

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 14/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + L  + +           KI VFS ++G+ L      + R  +    + +   YI 
Sbjct: 8   QFNLELFIKIIPQLIDGSILTIKITVFSIIIGLFLGTILG-MGRISYNIIYRYISSFYIE 66

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV I + Y           F           + +  +AL   + A++ EI+
Sbjct: 67  F--VRGTPLLVQIMIIY-----------FGLPSFGINLSAYTAGILALGLNSGAYVGEII 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           ++G+++V  GQMEAA +LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL   + 
Sbjct: 114 KAGILSVHVGQMEAARSLGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIA 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L  VG  I + T  A   +L     YL +++ ++  +  +  +  +  
Sbjct: 174 IVELTRVGKQIYSSTYNAWTPLLGVALFYLIMTLPLSKLVQHIENRWKIDR 224



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  +    +I    +GT++G GR+S N +  +I   Y+E  R  P LV I  +
Sbjct: 21  LIDGSILTIKITVFSIIIGLFLGTILGMGRISYNIIYRYISSFYIEFVRGTPLLVQIMII 80

Query: 149 YKSVLSVLPI 158
           Y  + S    
Sbjct: 81  YFGLPSFGIN 90


>gi|15888723|ref|NP_354404.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156465|gb|AAK87189.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 217

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                F       +  +   +F +G +   F   + R     + + +   YI+  +I  +
Sbjct: 6   WPEFLFLLRGAGWSIVLTAIAFSIGSLTGGF-FAIMRLSQYGSVRNVAAGYIT--VIQSI 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+++ + Y        L  F F       P  ++  ++LS Y +A++AEI R  + AV
Sbjct: 63  PVLMILFMSYY------GLTLFGF-----EIPPLLAASVSLSVYVSAYLAEIWRGSIQAV 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q EA+ +L LT  +  R V+LPQA+R  +PP     + L+KN+S+   VGF +L   
Sbjct: 112 PKPQWEASASLALTRFQQYRYVILPQALRLSLPPTVGFLVQLVKNTSIVSVVGFVELSRA 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  + N T +  ++  +   +Y ++   ++     L   + +  
Sbjct: 172 GQLVNNATFRPFQVFFVVALLYFAICFPLSRLSRHLERVLHVGR 215


>gi|26991114|ref|NP_746539.1| amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|24986152|gb|AAN70003.1|AE016638_11 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 218

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 14/209 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +  F + IVL LF     R         +  +      I   P L+ +   Y +  
Sbjct: 24  IGVTLLGFAIAIVLGLFLAIGRRSARIWISWPIGGVIE---FIRSTPLLIQVYFLYYVLP 80

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +  V      +G            + +  + A ++AE+ RSGL AVPRGQ EA  AL ++
Sbjct: 81  NYGVSLTAMQVG-----------VLGIGLHYACYLAEVYRSGLDAVPRGQWEAVTALNMS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              A R ++LPQA+R I+PP+ +  + +LK++ +  A+   +++     I ++T + +E 
Sbjct: 130 PSLAYRNIILPQALRPILPPVGNYLVAMLKDTPVLSAITVVEIMQQAKNIGSETFRYLEP 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I +    +L+LSI++A  + R+ A++  K
Sbjct: 190 ITMVGVFFLALSIVLAYLVRRVEARLEQK 218



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 82  DSSYATAILVGF----VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D +YA  +L       +NT  +   G   A ++G  +  GR SA   ++W     +E  R
Sbjct: 5   DWNYAIQLLPELFRAALNTIGVTLLGFAIAIVLGLFLAIGRRSARIWISWPIGGVIEFIR 64

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           + P L+ ++FLY  + +         V   G+
Sbjct: 65  STPLLIQVYFLYYVLPNYGVSLTAMQVGVLGI 96


>gi|239826927|ref|YP_002949551.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. WCH70]
 gi|239807220|gb|ACS24285.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. WCH70]
          Length = 216

 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 94/169 (55%), Gaps = 9/169 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   ++  +  L L+ + +  +F  P +             +F +  +AL  + +A ++E
Sbjct: 54  IFAVMVETIRNLPLLLIIFFTYFALPEV--------GLKLDKFYAAIVALVVFESAMLSE 105

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSGL ++ +GQ+EAA + GLT+ +    ++LPQA+R ++PP+ SQ+++LLK++SLA+ 
Sbjct: 106 IVRSGLNSIDKGQIEAARSSGLTYIQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIV 165

Query: 344 VGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +L++    I  +     I I ++   +Y  ++  ++L   RL  +
Sbjct: 166 ISLPELMNHAQIINGRNVNYVIPIFILVALMYFVVNYSLSLVSRRLEYR 214


>gi|299066291|emb|CBJ37475.1| putative amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 217

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +F LG    L     +R       + +   YI  F     P L+ + L +          
Sbjct: 28  AFALGGTAGLVVL-FARVGRNAGLQRVSQAYIQIF--QNTPLLMQMFLVF---------- 74

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F           + +  I L+ YT+A++AE+ R  + A+PRGQ EA+ +L + + +  R
Sbjct: 75  -FGASMAGLEMSPWTAAAIGLTLYTSAYLAEVWRGCVEAIPRGQWEASASLAMGYFQQMR 133

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+LPQA+R  I P     + ++K +++A  +GF DL  +G  + N T Q   I  +   
Sbjct: 134 HVVLPQAVRMSIAPTVGFSVQIVKGTAVASIIGFEDLTKLGSVLANATFQPFLIYGLVGM 193

Query: 373 IYLSLSIMIALFMNRLNAKI 392
            YL+L   ++L  + L  K+
Sbjct: 194 AYLALCWPLSLCASHLEKKL 213


>gi|262173298|ref|ZP_06040975.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|261890656|gb|EEY36643.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
          Length = 265

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 34  MGYQWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 89  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++P+GQ EAA +LGL+   +   V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIPQGQYEAARSLGLSRFFSFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L+++++     L
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLILSALSAWL 254

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 255 EHKLGAQWR 263



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 11/128 (8%)

Query: 25  HNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSS 84
             +    +  +L+    +W +++    M       G  +   R    + + ++ +     
Sbjct: 7   RPLLFATLQMILVFAGLVWLLDSGAQAM-------GYQWQWHR----VPEYVLIFEDGEW 55

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV 
Sbjct: 56  WAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLVQ 115

Query: 145 IFFLYKSV 152
           I+ LY   
Sbjct: 116 IYLLYFVF 123


>gi|251788880|ref|YP_003003601.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537501|gb|ACT06122.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 238

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 13/214 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F  SF +G VLS+    + R            LY+  F   G P L+ + L Y 
Sbjct: 19  PVTLGLFFSSFAVGAVLSVLLVAM-RVSAVWPLSGFARLYMLAF--RGTPLLIQLFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF+ +  S   P     F    +AL+  TA + AEI+R  L+++P GQ+EA
Sbjct: 76  ------GLGQFSVVRDSLFWPVLRDPFSCAVLALALCTAGYTAEILRGALLSIPAGQIEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P A+R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GLACGMSRWLLLRRIIAPIALRHALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T + +E+ +    IYL L+ +I      L   ++
Sbjct: 190 TYRTLEVFVCAALIYLLLNFIIVRVFAWLERALS 223


>gi|218661166|ref|ZP_03517096.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli IE4771]
          Length = 203

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 14/201 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     + + SF  G++L L  T ++R F      A+   Y+  ++I G P LV + 
Sbjct: 17  WAGLIFTIPLTLLSFFFGLILGLI-TAIARLFGPAPVAAIARFYV--WVIRGTPLLVQLF 73

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   +   F +  I  +    A+ +EI+R+ + +VP+GQ EA
Sbjct: 74  VIFY-----------GLPSIGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++ R+A    +LPQA R  +PPL++ +++L+K++SLA A+   +L      I+  
Sbjct: 123 AYSIGMSWRQAMSRTILPQAGRVAVPPLSNTFISLVKDTSLAAAITVPELFQAAQRIVAT 182

Query: 360 TGQAIEIILIWMFIYLSLSIM 380
           T + + + +    IYL LS +
Sbjct: 183 TYEPLILYIEAALIYLVLSSI 203



 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L         I+G +    RL     VA I R YV V R  P LV +F +
Sbjct: 16  LWAGLIFTIPLTLLSFFFGLILGLITAIARLFGPAPVAAIARFYVWVIRGTPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + S+  + D       G  LN
Sbjct: 76  FYGLPSIGILLDAFPAALIGFTLN 99


>gi|307132728|ref|YP_003884744.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306530257|gb|ADN00188.1| Amino acid ABC transporter, permease protein [Dickeya dadantii
           3937]
          Length = 312

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R    L  +F       SV         +    F N   +     T+       +FS +
Sbjct: 30  LRIAGALFSLFIFAGIAESVALNSRWEWPVFASYFFNPVIVEGLGRTLLLTLLGTLFSII 89

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
            G  L+L     +R         L  LYI  F    L  +++I   +   +D   L    
Sbjct: 90  AGTGLAL-----ARLSSSTLLSTLAWLYIWLFRSLPLILVLIILYNFSYLYDALSLGIPF 144

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              +F       V   F    + L+   +A+ AEI+R G++ V  GQ EAA ALGL   +
Sbjct: 145 TSIEFFRYPTIDVLGPFAVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYR 204

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            T  ++LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++
Sbjct: 205 RTWRIILPQALRSILPTGFNEIISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMV 264

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++++    +   +A    +
Sbjct: 265 ATVWYLVITSVLSVLQYFVERYVARGAVR 293


>gi|163747860|ref|ZP_02155196.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45]
 gi|161378861|gb|EDQ03294.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45]
          Length = 224

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 15/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L + + L    L +  LT+       VF+ +L  +L++      R           +L+I
Sbjct: 6   LDYMLGLVPVILGYVPLTLFMAVAGMVFALILASLLAVE-----RVAKVPVLDWSVVLFI 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV + L Y   F  P +  F      T      +  + L+ + +A++AE 
Sbjct: 61  SFF--RGTPLLVQLFLFY---FGLPQVLSF-----LTQIDGVTAAIMGLTLHFSAYMAES 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ ++ V R Q EAA ++G+T  +    ++LPQA R   P L + +++++K +SLA  +
Sbjct: 111 IRAAIMGVDRSQWEAAQSIGMTQGQLMWRIILPQAARIAAPTLVNYFIDMIKGTSLAFTL 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +++         +    E  L    +Y  +  +++    RL   +
Sbjct: 171 GVTEMMGAAQKEAAGSFLYFEAFLAVPVMYWVIVEVLSQGQKRLETHL 218



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 33/60 (55%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++A +GM+ A I+ +L+   R++   ++ W   +++  FR  P LV +F  Y  +  V
Sbjct: 23  TLFMAVAGMVFALILASLLAVERVAKVPVLDWSVVLFISFFRGTPLLVQLFLFYFGLPQV 82


>gi|66044327|ref|YP_234168.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63255034|gb|AAY36130.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 365

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + +V  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFPRKAVYGIAFLVIYPVVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 13/202 (6%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F   
Sbjct: 155 WGGLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSS 214

Query: 150 KSVLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
             +   +P   +          V+ F        +      +         +  LG   S
Sbjct: 215 VMLPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRS 274

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGS 260
           +    L +         +P +  +   +F   +LV+I   +  L+  K       ++G +
Sbjct: 275 MGLVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMA 330

Query: 261 TVSPEFMSLYIALSCYTAAFIA 282
           T    F +L   + C+  +  +
Sbjct: 331 TEGYVFAALVFWIFCFGMSRYS 352


>gi|300717676|ref|YP_003742479.1| lysine/arginine/ornithine ABC transporter, permease protein
           [Erwinia billingiae Eb661]
 gi|299063512|emb|CAX60632.1| lysine/arginine/ornithine ABC transporter, permease protein
           [Erwinia billingiae Eb661]
          Length = 238

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 98/228 (42%), Gaps = 2/228 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLY 223
           +   +    + L +      +   I ++  ++ +VL    A  LS             ++
Sbjct: 1   MIDIIHDYWQALLWTDGYRFSGVAITLWLLIISVVLGGCLAVLLSIARVSSITAVRFPVW 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T++  G P  V + + Y   +   ++   + +  +          +AL+  T A+  E
Sbjct: 61  LFTYIFRGTPLYVQLLIFYSGMYTLEIVKGNDLL-NAFFRSGLNCTLLALTLNTCAYTTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    + +VP G++EAA A G +  K  R +++P A+R+ +P  +++ + +L +++LA  
Sbjct: 120 IFAGAIRSVPHGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNEVILMLHSTALAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               DL+ V   I + T Q      I   +YL +S ++     +   +
Sbjct: 180 ATVPDLLKVARDINSATYQPFVAFGIAAVLYLMISYVLISLFRKAEKR 227



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 85  YATAIL-------VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           Y  A+L        G   T WL    ++    +  L+   R+S+   V +   ++  +FR
Sbjct: 8   YWQALLWTDGYRFSGVAITLWLLIISVVLGGCLAVLLSIARVSSITAVRFPVWLFTYIFR 67

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
             P  V +   Y  + ++  +  + ++  F 
Sbjct: 68  GTPLYVQLLIFYSGMYTLEIVKGNDLLNAFF 98


>gi|289426755|ref|ZP_06428483.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|289160081|gb|EFD08257.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|314979159|gb|EFT23253.1| conserved hypothetical protein [Propionibacterium acnes HL072PA2]
 gi|315089120|gb|EFT61096.1| conserved hypothetical protein [Propionibacterium acnes HL072PA1]
          Length = 182

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 1/144 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +          +  I L     A++AEI RSGL +V  GQ EAA ALG+      R
Sbjct: 7   QFASVETEKAVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMR 66

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
             ++PQAMR IIPP  ++ + +LK +SL +A+ F  DL      I N T   I ++++  
Sbjct: 67  RTIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
             YL ++ ++ +  + L       
Sbjct: 127 CWYLVMTSVLMIGQHFLEQYFGRG 150


>gi|89099282|ref|ZP_01172160.1| YqiY [Bacillus sp. NRRL B-14911]
 gi|89086128|gb|EAR65251.1| YqiY [Bacillus sp. NRRL B-14911]
          Length = 219

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 100/199 (50%), Gaps = 17/199 (8%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I+L+LF     +    K    L   Y S F   G P ++ + L Y   +  P +  F   
Sbjct: 38  IILALF-----KISSLKYLGWLADAYTSIF--RGTPLVLQLMLIY---YGSPQILGFQIE 87

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   + +  ++    +AA+I+EI+R+G++AV +GQ EA++ALG+ +++    ++LP
Sbjct: 88  -------PYAAAVLSFGLNSAAYISEIIRAGILAVDKGQREASMALGIPYKRMMWDIILP 140

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+++I+P L ++++ L K S++   +G  D++     +  +     E +LI   IY  +
Sbjct: 141 QALKNILPALMNEFITLTKESAIVTTIGVMDIMRRSYQVGAEKYSFFEPLLIAGLIYYVM 200

Query: 378 SIMIALFMNRLNAKIALKE 396
            I + +    +  ++   +
Sbjct: 201 VITLTIIGKAVERRMRRSD 219



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 31/83 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G   T  +     +    +G ++   ++S+ K + W+   Y  +FR  P ++ +  
Sbjct: 14  YILKGIGVTLQIVLLAGLLGFALGIILALFKISSLKYLGWLADAYTSIFRGTPLVLQLML 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMF 170
           +Y     +L             F
Sbjct: 74  IYYGSPQILGFQIEPYAAAVLSF 96


>gi|116050926|ref|YP_790250.1| histidine transport system permease protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296388587|ref|ZP_06878062.1| histidine transport system permease protein [Pseudomonas aeruginosa
           PAb1]
 gi|115586147|gb|ABJ12162.1| histidine transport system permease protein [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 229

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 2/209 (0%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                +LG VL       ++    +  +AL   Y  T LI  +P LV++ L +       
Sbjct: 20  LALGSLLGAVLIGLLGASAKLAANRPLRALASGY--TTLIRSVPDLVIMLLLFFSLQILL 77

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                           F +  + L+    A+  E  R    AVP GQ+EAA A G+   +
Sbjct: 78  NRVTDALGIAQVDIDPFAAGCVTLAFIYGAYFTETFRGAFQAVPAGQVEAAQAYGMGRWR 137

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R VLLPQ +R  +P + + +  L+K+++L   +G  DLV         T Q     L+
Sbjct: 138 VFRRVLLPQMLRYALPGIGNNWQVLVKSTALVSIIGLGDLVKATQDAGKGTLQFFHFTLV 197

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IYL+++ +    +  L  + +L  ++
Sbjct: 198 CGLIYLAITAISNAALLWLERRSSLGVRR 226



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   IL G + T  LA   ++ A +IG L  + +L+AN+ +  +   Y  + R++P L
Sbjct: 4   DGFGPQILAGTLVTLKLALGSLLGAVLIGLLGASAKLAANRPLRALASGYTTLIRSVPDL 63

Query: 143 VVIFFLYKSV 152
           V++  L+ S+
Sbjct: 64  VIMLLLFFSL 73


>gi|310766168|gb|ADP11118.1| transport system permease protein [Erwinia sp. Ejp617]
          Length = 366

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G ++  G+ P+        A+++G ++         I    +  L    R S
Sbjct: 76  WVFIHARFG-QLMYGLYPHELRWRINLALVIGLLS---------IVPMFLKNLP---RRS 122

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           +          Y+  +  + PL+V   +Y   L +  +                     T
Sbjct: 123 S----------YIVGWAVVYPLLVWLLMYGGWLGLEQVETRQ-------------WGGLT 159

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +   GI+L+L      R       + L +L+I  +    L T++ ++ 
Sbjct: 160 LTLIIAAVGIAGALPAGILLAL-----GRRSQMPVVRTLCVLFIEFWRGVPLITVLFMS- 213

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   +   + +   + +  + +A++AE+VR GL A+P+GQ E A
Sbjct: 214 ---------SVMLPLFMAEGSSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEGA 264

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K  RLV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 265 ESLALGYWKTQRLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 324

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 325 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFHTGR 363


>gi|323485959|ref|ZP_08091291.1| hypothetical protein HMPREF9474_03042 [Clostridium symbiosum
           WAL-14163]
 gi|323693047|ref|ZP_08107267.1| hypothetical protein HMPREF9475_02130 [Clostridium symbiosum
           WAL-14673]
 gi|323400721|gb|EGA93087.1| hypothetical protein HMPREF9474_03042 [Clostridium symbiosum
           WAL-14163]
 gi|323502928|gb|EGB18770.1| hypothetical protein HMPREF9475_02130 [Clostridium symbiosum
           WAL-14673]
          Length = 220

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 17/223 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L     T+        F  VLG +++L     ++    K    L   YI      
Sbjct: 12  YSGLFLEGMGYTLLLALITVTFGTVLGTLVAL-----AKMGKFKVLSFLATAYIE----- 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                  I     L     +              +F  +  AL     A+++EI+R+G+ 
Sbjct: 62  -------IMRGTPLLLQLYLFYFLVPQMLPWEPSKFTCVCTALVLNATAYVSEIIRAGIQ 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQMEAA +LGL   +A + V+LPQA+++I+P L ++++  +K +SLA      DL+
Sbjct: 115 AVDPGQMEAARSLGLNTSQAMKKVILPQALKNILPALGNEFVTDIKETSLASTFFLGDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   T+       +E ++I   IY  L+  ++  +     ++A
Sbjct: 175 TTFRTLNGALYLTLEPLIIVGIIYFLLTFTLSKLIAVFERRMA 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 38/80 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+   L G   T  LA   +   T++GTLV   ++   K+++++   Y+E+ R  P L+ 
Sbjct: 12  YSGLFLEGMGYTLLLALITVTFGTVLGTLVALAKMGKFKVLSFLATAYIEIMRGTPLLLQ 71

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           ++  Y  V  +LP       
Sbjct: 72  LYLFYFLVPQMLPWEPSKFT 91


>gi|308068847|ref|YP_003870452.1| Probable amino-acid ABC transporter permease protein ytmM
           [Paenibacillus polymyxa E681]
 gi|305858126|gb|ADM69914.1| Probable amino-acid ABC transporter permease protein ytmM
           [Paenibacillus polymyxa E681]
          Length = 236

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 105/213 (49%), Gaps = 11/213 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V S + G+V+ +  T L+R +       +   Y++   I G P L+ + L Y   F
Sbjct: 23  LIITVVSVMAGLVIGII-TALARIYKVPVLSQISHGYVTF--IRGTPMLMHLLLIY---F 76

Query: 247 DKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             P+L       F +   S   P  +   I+ S  + A+++E+VRSG+ +V +GQ+EAA 
Sbjct: 77  SLPLLIDAGAKHFGWPLQSKDVPYMVFALISFSITSGAYMSEVVRSGIQSVNKGQIEAAY 136

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+G+T  +  R ++ PQA    +P LT+  + +L  S+LA  V   ++ +    + +   
Sbjct: 137 AVGMTTWQVLRRIVFPQAFVVSLPNLTNSVIGMLHGSTLAFTVSVTEIQAQAEILASTNW 196

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +E+ +    ++  L+++I      +  KI +
Sbjct: 197 KYLEVYIAAALLFWGLTVLIERISGLVEKKINV 229



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +     NT  +    ++   +IG +    R+    +++ I   YV   R  P L+ +  +
Sbjct: 15  LFSALPNTLIITVVSVMAGLVIGIITALARIYKVPVLSQISHGYVTFIRGTPMLMHLLLI 74

Query: 149 YKSVL 153
           Y S+ 
Sbjct: 75  YFSLP 79


>gi|163740071|ref|ZP_02147475.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
 gi|161386702|gb|EDQ11067.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
          Length = 224

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 12/185 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFM 267
           R         L +L+IS F   G P LV + L Y  L     VL Q N +          
Sbjct: 45  RVLRIPVLDQLVVLFISFF--RGTPLLVQLFLFYYGLPQVLSVLTQINGVS--------- 93

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+ + AA++AE +R+ ++ V R Q EAA ++G+T  +  R ++LPQA R   P L
Sbjct: 94  AAIMGLTLHFAAYMAESIRAAILGVDRSQWEAAQSIGMTRGQMMRRIVLPQAARIAAPTL 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +++++K +SLA  +G  +++         +    E  L+   IY  L   ++L   R
Sbjct: 154 VNYFIDMIKGTSLAFTLGVTEMMGATQKEAAGSFLYFEAFLVVAVIYWILVEALSLVQRR 213

Query: 388 LNAKI 392
           L   +
Sbjct: 214 LETHL 218


>gi|163800830|ref|ZP_02194730.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175179|gb|EDP59976.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 365

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       V S  +G+
Sbjct: 118 TPKRIWIWLFFVNIYPFIIAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 178 ALAL-----GRRSDMPIIRSICTVYIEVWRGVPLITVLFMA----------SVMLPLFLS 222

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++LPQ
Sbjct: 223 EGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQ 282

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 283 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 342

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 343 VFCFGMSRYSIWLENKLHTGHKR 365


>gi|99078017|ref|YP_611275.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99035155|gb|ABF62013.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 216

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 13/226 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS---RHFHEKTGKALPLLYISTFLIFGL 232
           +      +     + +F  V+G+  +L    +    R F      A   L+IS F   G 
Sbjct: 1   MWDLVPILLGYVPLTLFMAVIGMACALVLASILAVERVFQIPVLDAFVRLFISFF--RGT 58

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + L Y   +  P +  F             +  + L+ + +A++AE +R+ ++ V
Sbjct: 59  PLLVQLFLFY---YGLPQVLGF-----LGSIDGVTATIMGLTLHFSAYMAESIRAAILGV 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            R Q EAA A+G+T  +  R ++LPQA R   P L + +++++K +SLA  +G  +L+  
Sbjct: 111 DRSQWEAAQAVGMTQGQMMRQIILPQAARVAAPTLVNYFIDMIKGTSLAFTLGVTELMGA 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                  +    E  L+   IY  L   ++     L   +     +
Sbjct: 171 TQKEAAGSFLYFEAFLVAAAIYWILVEALSFGQRHLETYLNKAHAR 216



 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 30/60 (50%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++A  GM  A ++ +++   R+    ++    R+++  FR  P LV +F  Y  +  V
Sbjct: 15  TLFMAVIGMACALVLASILAVERVFQIPVLDAFVRLFISFFRGTPLLVQLFLFYYGLPQV 74


>gi|239813839|ref|YP_002942749.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239800416|gb|ACS17483.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 229

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 5/230 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              F N   +S   +     + +      +G VL      L R   ++   A   +Y++ 
Sbjct: 5   DLSFYNWDVISNFVVKGFYFSIMLTIVATIGGVLFGTVLALMRLSGKRWLDAPAAIYVNG 64

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                   LV++ L + L         F  IG +  S   +S  I    + AA+ +EI+R
Sbjct: 65  MRSIP---LVMVILWFFLLVPASFYAAFGSIGSNYRSE--ISAVITFIAFEAAYFSEIMR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++PRGQ+ A  A+G+T+ +  RLV+LPQA R+++P L +Q + L +++SL  A+G 
Sbjct: 120 AGIQSIPRGQVNAGQAVGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGA 179

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D++    T     G+ IE  L+   +Y  +   ++  + RL+ KIA+  
Sbjct: 180 YDMLKGFETAGKNFGRPIEAYLLAAVVYFIMCYALSWLVKRLHKKIAIIR 229


>gi|330965816|gb|EGH66076.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 217

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 14/228 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++ F +      L      +    ++    F+L +VL L    L+   H      L   Y
Sbjct: 1   MMDFDLAFAWSILPELFQGLLVTVQVVFLGFLLAVVLGLIL-ALALRSHMTLVHRLSKGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +S F     P +V +   Y L F  P+                 +  I L CY AA+I E
Sbjct: 60  LSFF--RNTPLMVQL---YVLFFAMPM--------AGITFLAITTGVIGLGCYYAAYIGE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R  +  +P GQ EAA AL        R ++LPQA++ ++P L +  + + K + L   
Sbjct: 107 AYRGAIDDIPAGQWEAARALDFNSGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +L      I   T +  E   +   ++L++S+  +L    L  +
Sbjct: 167 ITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 214



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 36/88 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S    +  G + T  + F G + A ++G ++     S   LV  + + Y+  FRN P 
Sbjct: 9   AWSILPELFQGLLVTVQVVFLGFLLAVVLGLILALALRSHMTLVHRLSKGYLSFFRNTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +V ++ L+ ++               G+
Sbjct: 69  MVQLYVLFFAMPMAGITFLAITTGVIGL 96


>gi|329906187|ref|ZP_08274378.1| Glutamate Aspartate transport system permease protein gltK
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327547320|gb|EGF32156.1| Glutamate Aspartate transport system permease protein gltK
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 230

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 7/236 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +    +      M    K+   +   GIVL      + R    K       
Sbjct: 1   MFANFDFNVIERSWVYLFQTGMVFTLKLTAMAMAGGIVLGTLL-AMMRLSKYKALSLPAT 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAF 280
            Y++           LI + +  +F  P +G +     + +    F S  I    + AA+
Sbjct: 60  TYVNLIRSMP-----LILVIFWFYFLVPYIGAWLIGSPTPIQVGAFSSSLITFILFEAAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI+R+G+ ++PRGQ+ A  ALG+ + +    ++LPQA R++IP L +Q + L ++ SL
Sbjct: 115 YCEIMRAGIQSIPRGQVSAGRALGMNYWQTMSNIVLPQAFRNMIPLLLTQTIVLFQDVSL 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   D V     I  + G+ IE+ L    +Y  +   ++L + +L  ++A+  
Sbjct: 175 VYVLSITDFVGAASKIAQRDGRLIEMYLFVAVVYFVMCFGLSLLVKQLQKRVAIIR 230



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 35/75 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+      G V T  L    M    ++GTL+   RLS  K ++     YV + R++P ++
Sbjct: 13  SWVYLFQTGMVFTLKLTAMAMAGGIVLGTLLAMMRLSKYKALSLPATTYVNLIRSMPLIL 72

Query: 144 VIFFLYKSVLSVLPI 158
           VIF+ Y  V  +   
Sbjct: 73  VIFWFYFLVPYIGAW 87


>gi|310767150|gb|ADP12100.1| arginine transporter permease subunit ArtQ [Erwinia sp. Ejp617]
          Length = 238

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEK------TGKALPLLYISTFLIFGLPTLVLI 238
                 +    + +V +++ +   R             +ALP + +  F+ FG   L+LI
Sbjct: 17  LAVCALIAGLFMAMVFAVWESARWRALAWLGTGLVTLFRALPEILVVLFIYFGASQLLLI 76

Query: 239 AL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
               + ++     +     I    VSP F+   IAL+   +++ ++ +R  L AVP GQ 
Sbjct: 77  LSDGFTINLAFVQIPVQVNIENFDVSP-FLCGVIALAILYSSYASQTLRGALQAVPLGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L   +   D++    +I 
Sbjct: 136 ESGQALGMKKSAVFLRLIVPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     +I   IYL +++     + R+  +    E+
Sbjct: 196 TRTQEPFTWYVIAAAIYLVITLFSQQVLKRIELRATRFER 235



 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 2/112 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A   G   T  LA   +I    +  +      +  + +AW+    V +FR +P ++V
Sbjct: 5   YTLASAAGM--TVGLAVCALIAGLFMAMVFAVWESARWRALAWLGTGLVTLFRALPEILV 62

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           + F+Y     +L I      +          ++     +       +   +L
Sbjct: 63  VLFIYFGASQLLLILSDGFTINLAFVQIPVQVNIENFDVSPFLCGVIALAIL 114


>gi|259908947|ref|YP_002649303.1| arginine transporter permease subunit ArtQ [Erwinia pyrifoliae
           Ep1/96]
 gi|224964569|emb|CAX56082.1| Arginine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283478953|emb|CAY74869.1| Arginine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 238

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEK------TGKALPLLYISTFLIFGLPTLVLI 238
                 +    + +V +++ +   R             +ALP + +  F+ FG   L+LI
Sbjct: 17  LAVCALIAGLFMAMVFAVWESARWRALAWLGTGLVTLFRALPEILVVLFIYFGASQLLLI 76

Query: 239 AL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
               + ++     +     I    VSP F+   IAL+   +++ ++ +R  L AVP GQ 
Sbjct: 77  LSDGFTINLAFVQIPVQVSIENFDVSP-FLCGVIALAILYSSYASQTLRGALQAVPLGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L   +   D++    +I 
Sbjct: 136 ESGQALGMKKSAVFLRLIVPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     +I   IYL +++     + R+  +    E+
Sbjct: 196 TRTQEPFTWYVIAAAIYLVITLFSQQVLKRIELRATRFER 235


>gi|218676306|ref|YP_002395125.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
 gi|218324574|emb|CAV26091.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
          Length = 308

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 108/262 (41%), Gaps = 16/262 (6%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
             +   +V                +  +   + +    +    ++ V+S VL +      
Sbjct: 40  WLYYRSAVGINYQWRWEDAFTLIFIPPSQGSIPYFFQGLIATLRLSVWSMVLALSFGTLL 99

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------------- 251
             ++RH      K   L++I           V I   +  +   P+L             
Sbjct: 100 G-VARHSKIAFFKTPALIFIQLVRNIPPLVFVFIFYFFVSNQLIPLLGLESILREHNGEI 158

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q    G + +     S  I +   ++A+IAE++R+GL  +P+GQ EAA +LGL+   
Sbjct: 159 NAVQAFLFGPTNLWENLASGVICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALS 218

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQ + +I PPL  Q ++L+K++S+   +   ++  VG  + N +G   EI LI
Sbjct: 219 KYRFVVGPQVLTAITPPLAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLI 278

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
             F+Y +L   ++     +  +
Sbjct: 279 VGFVYFALCFALSRLFKVIEQR 300



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 23/146 (15%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M   +  T  +    MK  Y        +  +L  ++ V   W          +S + + 
Sbjct: 1   MSSTSALTTPKPNVHMKPWY---QRLTLLDGVLLAVICVFAGWLYY-------RSAVGIN 50

Query: 61  IGFLSERAGFEI----DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
             +  E A   I     QG +PY            G + T  L+   M+ A   GTL+G 
Sbjct: 51  YQWRWEDAFTLIFIPPSQGSIPY---------FFQGLIATLRLSVWSMVLALSFGTLLGV 101

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPL 142
            R S          +++++ RNIPPL
Sbjct: 102 ARHSKIAFFKTPALIFIQLVRNIPPL 127


>gi|77457202|ref|YP_346707.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77381205|gb|ABA72718.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 365

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 16/267 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            + PL +    +K+V  +  +  + IV    +     GL     +      + +    +G
Sbjct: 109 GVAPLFIKRVAHKAVYGLSFLVVYPIVAWCLLHGGVFGLDTVATSQWGGLMLTLVIATVG 168

Query: 198 IVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           I  +L       L R  +    + + + +I  +    L T VL      L    P    F
Sbjct: 169 IAGALPLGIVLALGRRSNMPAIRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMNF 227

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +         + +   I +  + +A++AE+VR GL A+P+GQ EAA A+GL + +A  LV
Sbjct: 228 D---------KLLRALIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLV 278

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWM 371
           +LPQA++ +IP + + ++ L K++SL + +G  DL++            G A E  +   
Sbjct: 279 ILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAA 338

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++      ++ +   L  K+    K+
Sbjct: 339 LVFWIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 36/76 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            + AT+   G + T  +A  G+  A  +G ++  GR S    +  +C  ++E +R +P +
Sbjct: 148 DTVATSQWGGLMLTLVIATVGIAGALPLGIVLALGRRSNMPAIRVVCVTFIEFWRGVPLI 207

Query: 143 VVIFFLYKSVLSVLPI 158
            V+F     +   LP 
Sbjct: 208 TVLFMSSVMLPLFLPE 223


>gi|16273100|ref|NP_439334.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           Rd KW20]
 gi|260581121|ref|ZP_05848942.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus
           influenzae RdAW]
 gi|1168526|sp|P45090|ARTQ_HAEIN RecName: Full=Arginine ABC transporter permease protein ArtQ
 gi|972902|gb|AAA95979.1| ArtQ [Haemophilus influenzae]
 gi|1574103|gb|AAC22829.1| arginine ABC transporter, permease protein (artQ) [Haemophilus
           influenzae Rd KW20]
 gi|260092250|gb|EEW76192.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Haemophilus
           influenzae RdAW]
          Length = 221

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F    +A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVLA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|262155888|ref|ZP_06029010.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|262030340|gb|EEY48982.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
          Length = 188

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEF 266
            R F       L  LYIS F   G P LV + L Y  L    P+L   +          F
Sbjct: 8   IRVFKVPVLDPLSQLYISFF--RGTPLLVQLFLLYYGLPQVFPLLVGLD---------AF 56

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  I L+ + AA++AE +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P 
Sbjct: 57  SAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPS 116

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L + +++++K++SLA  +G A++++      + + +  E  L    IY  + +++    +
Sbjct: 117 LMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQS 176

Query: 387 RLNAKI 392
               K+
Sbjct: 177 WAEQKL 182


>gi|255318802|ref|ZP_05360028.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter radioresistens SK82]
 gi|255304058|gb|EET83249.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter radioresistens SK82]
          Length = 247

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 9/224 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +      +  + VLG +L +      R    KT + +   Y++ F    +
Sbjct: 23  QWVLIGLGWLLVIALVAWSIAMVLGSILGIM-----RTLPSKTARTIGTAYVTLF--RNV 75

Query: 233 PTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P L+ + + + +  +F    +  +     S+ +   +S  + L  +TAA + E VR+G+ 
Sbjct: 76  PLLIQLFIWFYVVPNFLPGPVKDWWMNDLSSNASALISASVGLGLFTAARVCEQVRTGIE 135

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PRGQ+ A  A+G +  +  R V+LPQ+ R+I+PPL+S+  N +KN+S+A  VG A+++
Sbjct: 136 ALPRGQINAGYAMGFSTSQLYRYVILPQSFRTILPPLSSELTNCVKNTSVASLVGVAEII 195

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S   TI   T   IEI      I++ +++ + L M  L  ++ +
Sbjct: 196 SQMKTISEYTQNTIEIYTFVTLIFIVINVCLILLMTLLEHRLRV 239



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           DS+Y   +L+G      +A      A ++G+++G  R   +K    I   YV +FRN+P 
Sbjct: 18  DSTYLQWVLIGLGWLLVIALVAWSIAMVLGSILGIMRTLPSKTARTIGTAYVTLFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L+ +F  +  V + LP P     +  
Sbjct: 78  LIQLFIWFYVVPNFLPGPVKDWWMND 103


>gi|237802192|ref|ZP_04590653.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331025049|gb|EGI05105.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 231

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 79/164 (48%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G+P L+ + L Y    +        F         F +  IAL     A+  E+ R 
Sbjct: 58  LVRGVPELLWVLLIYFGTVNGMRALGELFGIPDLALNAFAAGVIALGICFGAYATEVFRG 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + ++ L+K+++L   +G  
Sbjct: 118 AILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNLFMILMKDTALVSVIGLE 177

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++      +  T +A    ++   +YL L+++  + M  L  +
Sbjct: 178 EIMRHAQIAVGFTREAFTFYMVAAVMYLCLTVLAMIGMYFLEKR 221


>gi|259909372|ref|YP_002649728.1| Putative amino acid ABC transporter, permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|224964994|emb|CAX56522.1| Putative amino acid ABC transporter, permease protein [Erwinia
           pyrifoliae Ep1/96]
          Length = 218

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L    L       + V +F  G +++L   RL R         +   Y+  F  
Sbjct: 4   FTDWDILRNLLLAARWTMALSVTAFFGGTLVALPLVRL-RLAGRLWPNRIIRAYVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+CYT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGIDLSPWAAAALALTCYTSAFLVDIWYGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA   LGL+  +    V+LPQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 KALPKGQWEACRCLGLSSGQTLFRVVLPQALRVAIAPTVGFAVQVVKGTALASIIGFIEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 170 TKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSRYSQYLEKKF 212



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 32/107 (29%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +     T++   +   RL+       I R YVE+F+  P 
Sbjct: 6   DWDILRNLLLAARWTMALSVTAFFGGTLVALPLVRLRLAGRLWPNRIIRAYVELFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  V                +                 A 
Sbjct: 66  LMQLFLAFFGVALFGIDLSPWAAAALALTCYTSAFLVDIWYGSIKAL 112


>gi|307131970|ref|YP_003883986.1| Octopine transport system permease occM [Dickeya dadantii 3937]
 gi|306529499|gb|ADM99429.1| Octopine transport system permease protein occM [Dickeya dadantii
           3937]
          Length = 238

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 13/214 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F  SF LG  LS+    + R            LY+  F   G P L+ + L Y 
Sbjct: 19  PVTLGLFFSSFALGATLSVLLVAM-RVSGVWPLSGFARLYMLIF--RGTPLLIQLFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF+ +  S   P     F    +AL+  TA + AEI+R  L+++P GQ+EA
Sbjct: 76  ------GLGQFSVVRDSLFWPVLRDPFSCAVVALALCTAGYTAEILRGALLSIPAGQIEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P A+R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GLACGMSRWLLLRRIIAPVALRHALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T + +E+      IYL L+ +I      L   ++
Sbjct: 190 TYRTLEVFACAALIYLLLNFIIVRVFAWLERTLS 223



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L FS       +  L+ A R+S    ++   R+Y+ +FR  P L+ +F +
Sbjct: 14  LLSALPVTLGLFFSSFALGATLSVLLVAMRVSGVWPLSGFARLYMLIFRGTPLLIQLFLI 73

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 74  YYGLGQF 80


>gi|307130053|ref|YP_003882069.1| membrane protein of an ABC superfamily glutamate/aspartate
           transporter [Dickeya dadantii 3937]
 gi|306527582|gb|ADM97512.1| membrane component of an ABC superfamily glutamate/aspartate
           transporter [Dickeya dadantii 3937]
          Length = 224

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    +I + + ++GIV       + R    K       LY
Sbjct: 1   MYNFDWSSIPPSLPYLIKGMGVTLEITLTAVMVGIVWGTVL-AVMRLSPIKPISWFAKLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--IVPSLLQNVLGLSPKTDIRLVSAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R++IP L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQASAALALGMTHWQSMRLVILPQAFRAMIPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL   F+Y  +S+  ++ +N L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASMLVNYLKRR 222



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 42/78 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G   T  +  + ++   + GT++   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIPPSLPYLIKGMGVTLEITLTAVMVGIVWGTVLAVMRLSPIKPISWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLIVPSL 82


>gi|293606208|ref|ZP_06688571.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815355|gb|EFF74473.1| ectoine/hydroxyectoine ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 223

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 14/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L      +    +  V   ++ + L L    L R        +LP  
Sbjct: 1   MSPIFDWSFALEILPTLGSALVITIEATVLGMLVAVTLGLALAMLRRSRLRIV--SLPTA 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++  F I   P LV +   Y L +  P+                 +  +AL  + A + A
Sbjct: 59  FVIEF-IRSTPLLVQM---YFLFYVLPLT--------GVQMSPLATGIVALGLHYATYCA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+G+ AVPRGQ EAA AL ++  +    V+LPQA+  ++P L +  + + K++ L  
Sbjct: 107 EVYRAGIEAVPRGQWEAATALNMSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A+   +L+     I + T +  E + +   ++L+LS++ A  +  L A++   
Sbjct: 167 AITVVELLQQSKMIGSATFRYTEPLTLVGVLFLALSLVAAWGVRGLEARLQRY 219



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 36/112 (32%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  ++        +    V T      GM+ A  +G  +   R S  ++V+      +E 
Sbjct: 4   IFDWSFALEILPTLGSALVITIEATVLGMLVAVTLGLALAMLRRSRLRIVSLPTAFVIEF 63

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            R+ P LV ++FL+  +                + L+              A
Sbjct: 64  IRSTPLLVQMYFLFYVLPLTGVQMSPLATGIVALGLHYATYCAEVYRAGIEA 115


>gi|261867468|ref|YP_003255390.1| arginine transporter permease subunit ArtQ [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412800|gb|ACX82171.1| histidine transport system permease protein HisQ [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 220

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 9/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +   S           + V S VLG++L +    L  +     GK +    +   L+ 
Sbjct: 1   MFSDYFSLMFTAALMTLGLAVCSLVLGLILGMLFAVLEANRF--VGKPMA---VFVALLR 55

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +   +      G       F     ALS   AA+ ++ +R  + 
Sbjct: 56  GLPEILVVLLVYFGSSEVVEM----ITGDYIEFGAFGCGVFALSLIFAAYASQTLRGAIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 112 AIAKGQWESGAALGLSKGYTFIHIVMPQVWRHALPGLSNQWLVLLKDTALISLIGVDDLM 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I   T Q      I   IYL ++++  + + +L  +    E+
Sbjct: 172 RQAQLINTNTHQPFTWYGIAALIYLLVTLVSQVGIRKLELRFTRFER 218


>gi|224825590|ref|ZP_03698695.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224602511|gb|EEG08689.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 229

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 5/213 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LH 245
            K+ + S +L +++ L     ++    +  + L   Y  T LI  +P LV++ L +  L 
Sbjct: 18  IKLALVSMLLSVLIGLVGAS-AKLSSHRPLRYLATAY--TTLIRSVPDLVIMLLLFYSLQ 74

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                L  +  I    + P F++  + L     A+  E  R    AVPRGQ+EAA A G+
Sbjct: 75  ILLNQLTDWAGIEQIDIDP-FLAGVVTLGFIYGAYFTETFRGAFQAVPRGQLEAATAYGM 133

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
                 R VL PQ MR  +P + + +  ++K ++L   +G AD+V         + Q   
Sbjct: 134 KPWLVFRRVLFPQMMRFALPGIGNNWQVMIKATALVSIIGLADIVKATQDAGKSSMQLFF 193

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             ++   IYL+++ +    +  L  + ++  +K
Sbjct: 194 FSIVGGLIYLAITTLSNGVLLWLERRYSVGVRK 226


>gi|307331405|ref|ZP_07610524.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces violaceusniger Tu 4113]
 gi|306882964|gb|EFN14031.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces violaceusniger Tu 4113]
          Length = 216

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 18/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   + +F LG+V ++     +R         +         I   P LV +   Y +  
Sbjct: 27  ALGSILAFALGLVWAMAFRSPTRFVRWPVAAVV-------EFIRNTPLLVQLFFFYYV-- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IAL  + + + AE+ R+G+  VP GQ EAA AL L+
Sbjct: 78  ---------LPTWDIKFSALTTGVIALGLHYSTYTAEVYRAGIDGVPNGQWEAATALSLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA+R ++P L +  + +LK+S +   +G  D++         + Q IE 
Sbjct: 129 RGRTWTAVILPQAIRRVVPALGNYVIAMLKDSPMLALIGVVDMLQKARAEGASSFQYIEP 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +    ++ ++   +L M  L  ++ 
Sbjct: 189 YTMVGIAFIVIAYPASLLMRALERRLG 215



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 26/70 (37%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T      G I A  +G +      S  + V W     VE  RN P LV +FF Y  
Sbjct: 18  GLLITLEATALGSILAFALGLVWAMAFRSPTRFVRWPVAAVVEFIRNTPLLVQLFFFYYV 77

Query: 152 VLSVLPIPDH 161
           + +       
Sbjct: 78  LPTWDIKFSA 87


>gi|251799196|ref|YP_003013927.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247546822|gb|ACT03841.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 236

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     + T   I + S  +G V+ +  T L+R +       L   Y++   I G 
Sbjct: 9   WTAFLQLWSAVPTTLLITLVSVSVGFVIGVI-TALARIYRIPVLSQLSSGYVTF--IRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P L  + L Y   F  P+L      QF+    S   P     YI+ S    A+++E+VRS
Sbjct: 66  PMLTHLLLIY---FGLPMLVDGLSAQFDLGWNSAKIPMIGFAYISFSITAGAYLSEVVRS 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL+AV RGQMEAA ++G+T  +A R ++ PQA+ + +P L++  + +L  S+LA  V   
Sbjct: 123 GLLAVDRGQMEAARSIGMTTPQALRRIVFPQALAASLPNLSNSVIGMLHGSTLAFTVSVV 182

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           DL +    + +   +  E  +    I+  L+I+I      +  +I +  K
Sbjct: 183 DLNAKAQIVASTNWKFFESYVAAALIFWGLTILIERCTGLIERRIRVYSK 232



 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 33/119 (27%), Gaps = 10/119 (8%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +      T  +    +    +IG +    R+    +++ +   YV   R  P L
Sbjct: 9   WTAFLQLWSAVPTTLLITLVSVSVGFVIGVITALARIYRIPVLSQLSSGYVTFIRGTPML 68

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
             +  +Y  +           +L  G+                      FS   G  LS
Sbjct: 69  THLLLIYFGL----------PMLVDGLSAQFDLGWNSAKIPMIGFAYISFSITAGAYLS 117


>gi|226942878|ref|YP_002797951.1| amino acid ABC transporter permease [Azotobacter vinelandii DJ]
 gi|226717805|gb|ACO76976.1| amino acid ABC transporter, permease protein [Azotobacter
           vinelandii DJ]
          Length = 221

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                 T+   A   + S +LG +L++      R  H      +   Y++ F    L  L
Sbjct: 14  WEGMQTTLLLLALGVLGSVLLGTLLAIL-----RLSHNPLLAGIASAYVNYFRSIPL-LL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V+I   + + F    +      G  T    F S  +A   + AAF  EIVR+G+ ++P G
Sbjct: 68  VIIWFYFAVPFVLRWIT-----GEDTPVGAFASCLVAFVMFEAAFYCEIVRAGIQSIPHG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+T+ ++ RLV+LPQA R + P L  Q + L +++SL  +VG  D ++   +
Sbjct: 123 QMSAAQALGMTYGQSMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYSVGLMDFLNAARS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  GQ  E ++    +Y  +S   +  + RL  ++ +
Sbjct: 183 HGDIIGQPHEFLIFAGLVYFVVSFAASQLVKRLQKRLTV 221



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 8/168 (4%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++S  +   A+  G   T  L   G++ + ++GTL+   RLS N L+A I   YV  F
Sbjct: 1   MDFSSIPAALPALWEGMQTTLLLLALGVLGSVLLGTLLAILRLSHNPLLAGIASAYVNYF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF---- 192
           R+IP L+VI + Y +V  VL                                        
Sbjct: 61  RSIPLLLVIIWFYFAVPFVLRWITGEDTPVGAFASCLVAFVMFEAAFYCEIVRAGIQSIP 120

Query: 193 ----SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
               S    + ++   +       +   K  PLL   + ++F   +LV
Sbjct: 121 HGQMSAAQALGMTYGQSMRLVILPQAFRKMTPLLLQQSIILFQDTSLV 168


>gi|239835031|ref|ZP_04683359.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239823094|gb|EEQ94663.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 220

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 18/220 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+       V S +LG+V +L      R        A+    ++  +I G+P L
Sbjct: 16  LEGVKYTLLVTLGSLVLSTLLGLVWALM-----RVSGIGWLSAVAGAIVN--VIRGIPIL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + ++F  P                  +  I L    +A+ AE  R+G+ A+  G
Sbjct: 69  VQL---FYIYFVLPEF--------GIALSALQAGIIGLGIAYSAYQAENFRAGIEAIDHG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ++G+      R V+LPQA+R I+PP  +  + LLK+SS A A+  A+L   G  
Sbjct: 118 QTEAAQSIGMGWFMTMRRVILPQAVRVILPPYGNIMVMLLKDSSQASAITVAELTLQGQL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   T + + +  +    YL LS+ + + + RL      +
Sbjct: 178 LAASTFKNMSVYTLVAMFYLCLSLPLMMAVGRLEKLFGKR 217



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +T++G +    R+S    ++ +    V V R IP LV +F++
Sbjct: 15  LLEGVKYTLLVTLGSLVLSTLLGLVWALMRVSGIGWLSAVAGAIVNVIRGIPILVQLFYI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +               G+ +               A 
Sbjct: 75  YFVLPEFGIALSALQAGIIGLGIAYSAYQAENFRAGIEAI 114


>gi|312196903|ref|YP_004016964.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311228239|gb|ADP81094.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 317

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 16/258 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT---LTMDTNAKIFVFSFVLGI 198
           LV+   L   V +    P        G  + +   +      + +       V + V G+
Sbjct: 67  LVLAAVLVIGVGTSSGWPLVRARFFSGSEMADAWPAVSHGLLVNLRLFVVCSVAAGVCGL 126

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L+L  T           + L   Y   F       L +I   Y + F  P L     + 
Sbjct: 127 LLALLRTVPGPVLF--PLRVLAAAYTDLFR-----GLPVILGLYLVGFGLPALR----LQ 175

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G+   P  +   IAL+    A++AE++R+G+ +V   Q+ AA +LGL++ K  R V+LPQ
Sbjct: 176 GTPRDPVVLGG-IALTLTYTAYVAEVIRAGIESVHPSQVAAARSLGLSYAKTMRFVVLPQ 234

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R ++PPL +  ++L K+S L   +G  D V       +         ++   ++L+++
Sbjct: 235 ALRRVVPPLLNDAISLQKDSGLVSVLGVVDAVRSAQIATSAHFNY-SPYVLAGLLFLAIT 293

Query: 379 IMIALFMNRLNAKIALKE 396
           I +    + L A+ A + 
Sbjct: 294 IPLTRITDYLGARTARRR 311



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 3/86 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK---LVAWICRVYVEVFRNIPPL 142
             A+  G +    L     + A + G L+   R         +  +   Y ++FR +P +
Sbjct: 100 WPAVSHGLLVNLRLFVVCSVAAGVCGLLLALLRTVPGPVLFPLRVLAAAYTDLFRGLPVI 159

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFG 168
           + ++ +   + ++         +  G
Sbjct: 160 LGLYLVGFGLPALRLQGTPRDPVVLG 185


>gi|71738063|ref|YP_272588.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558616|gb|AAZ37827.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320322172|gb|EFW78268.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320331823|gb|EFW87761.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330872849|gb|EGH06998.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 215

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++ L    + R   +   +    LYI  F  
Sbjct: 3   FTLWDILRNLLIGLQWTVALSLMAFIGGGLIGLLVMGM-RTSEKTGPRVTAKLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +L +T  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESISKGQWEASASLAMTPFEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHLERRL 211



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG LV   R S         ++Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTVALSLMAFIGGGLIGLLVMGMRTSEKTGPRVTAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|254779537|ref|YP_003057643.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
 gi|254001449|emb|CAX29449.1| ABC-type transport system, permease; putative membrane protein
           [Helicobacter pylori B38]
          Length = 229

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + I+++L      +HF  K   A    Y+S  +I G P LV I + + 
Sbjct: 33  PLAIISFILGLFIAIMVALIKIAPPKHFMHKALLAGVNFYVS--IIRGTPLLVQIVVVF- 89

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 90  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 140 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++     R+  
Sbjct: 200 LPIYLEAALIYWLFCLVLEAVQKRVEK 226


>gi|253576767|ref|ZP_04854093.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843798|gb|EES71820.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 219

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 14/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L + + +    L     T+       V S  LG   +            K        
Sbjct: 1   MSLEYLLSILGPMLEGTKTTIWLFLLAIVTSIPLGFAFTFMV-----RSRIKPVAWFAGA 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  +++ G P L+ +     + F  PV+     IG   V   F++  +A +   AA+ A
Sbjct: 56  YI--YVMRGTPLLLQMLF---VCFGLPVI---PVIGEYLVMDRFVAACVAFTLNYAAYFA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL+A+ +GQ EAA  LGL+  + T  ++LPQ +R  +P ++++ + L+K+++L  
Sbjct: 108 EIFRGGLLAIDKGQYEAAKVLGLSRWQTTTRIVLPQMLRIALPAVSNESITLVKDTALLY 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AV   +L+    T +N+    I   ++   +YL +++++ +    L  K  
Sbjct: 168 AVAVPELLHFAQTAVNRDF-TIVPFVLAGVLYLLMTLVLTVLFKALERKFK 217



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    +L G   T WL    ++ +  +G        S  K VAW    Y+ V R  P L+
Sbjct: 8   SILGPMLEGTKTTIWLFLLAIVTSIPLGFAFTFMVRSRIKPVAWFAGAYIYVMRGTPLLL 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPF 167
            + F+   +  +  I ++ ++  F
Sbjct: 68  QMLFVCFGLPVIPVIGEYLVMDRF 91


>gi|167589679|ref|ZP_02382067.1| glutamine ABC transporter permease protein [Burkholderia ubonensis
           Bu]
          Length = 218

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I +F  + G V+ + A  + R +  K    L  +YI
Sbjct: 1   MNFDWSAIWAALPDLMDGVRLTVFIALFGLLGGFVVGMIAG-MFRAYGPKAMNVLAQVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +     L+F  P+L      G         +  IA++  + A++AE+
Sbjct: 60  E--LIRGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIIAITVNSGAYLAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++P+G  EA +A+GL+  +    V+ P A R +IPPL +Q +  LK++SL + +
Sbjct: 108 VRGALLSIPKGLTEAGLAMGLSMPRVLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  II    QA+EI      IYL L+  + L +  +  ++ +
Sbjct: 168 GVGELTRKGQEIIAGNFQAVEIWTAVAVIYLMLTGAMTLTLRVVEKRMRI 217


>gi|153216003|ref|ZP_01950225.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124114516|gb|EAY33336.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
          Length = 265

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 34  MGYTWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 89  RQSHSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 254

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 255 EHKLGAQWR 263



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 6   FRPLLFAALQMMLVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGE 54

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 55  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSHSLVGRALGTGYIAVVRNTPLLV 114

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 115 QIYLLYFVF 123


>gi|312963938|ref|ZP_07778409.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311281973|gb|EFQ60583.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 256

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 16/258 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I   +    L+          D    +      N  GL          A + VF  +  I
Sbjct: 5   IRLYLTWAALFALFAGFFLSFDLKFSIILDKLPNLVGLHLAPNGFLQGAALTVFLCLCAI 64

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
             S    F T L R         +   Y S F    L          Q+      L Q  
Sbjct: 65  AASSVLGFITALGRLSKSAVAFGIATFYASFFRGTPLLI--------QILLIYLGLPQLG 116

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            + G+      ++  IALS    A+++EI R+G++ VP GQ EAA+ALG+        V 
Sbjct: 117 LVPGAI-----VAGIIALSLNYGAYLSEIFRAGILGVPHGQREAALALGMRDSAIFWHVT 171

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++     IY 
Sbjct: 172 LPQAMRTIIPPATNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAIIYW 231

Query: 376 SLSIMIALFMNRLNAKIA 393
            +S+ + L   R+     
Sbjct: 232 VMSLGLELIQARMERHYG 249



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L    +  ++++G +   GRLS + +   I   Y   FR  P L+ I  +
Sbjct: 49  FLQGAALTVFLCLCAIAASSVLGFITALGRLSKSAVAFGIATFYASFFRGTPLLIQILLI 108

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +  +P   +     + LN 
Sbjct: 109 YLGLPQLGLVPGAIVAGIIALSLNY 133


>gi|293605797|ref|ZP_06688170.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292815792|gb|EFF74900.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 229

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F          L     A     + V+    +L   R     + +  + +PLL    F 
Sbjct: 12  LFSGMVVTVQLFLVAWVMAFAIAVTLVVVRATNLAPCRWVVDAYVEYHRNVPLLVQVLFW 71

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            FG+P L+   L+  L+                 + E     IAL+  +AA+IAE +RSG
Sbjct: 72  YFGMPELLPEGLRLWLY---------------DHNAEMSLAAIALALGSAAYIAEDIRSG 116

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+P  Q EAA ALG ++ +  R V++PQA+R  IPPL  + L L KN+S+A+A+G  +
Sbjct: 117 LRAIPWTQFEAARALGASYLQCMRYVIVPQALRISIPPLVGRALLLFKNTSVAMAIGVME 176

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L      I N+T +          +YL  S +I    +R+ A+  L  
Sbjct: 177 LTYQAREIENETYRTFATFGAATIMYLLGSFLIMAVGSRIYARYRLNR 224



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 33/85 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D+S    +  G V T  L     + A  I   +   R +      W+   YVE  RN+P 
Sbjct: 5   DASQYQLLFSGMVVTVQLFLVAWVMAFAIAVTLVVVRATNLAPCRWVVDAYVEYHRNVPL 64

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV + F Y  +  +LP      +  
Sbjct: 65  LVQVLFWYFGMPELLPEGLRLWLYD 89


>gi|241663661|ref|YP_002982021.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240865688|gb|ACS63349.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 231

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 73/235 (31%), Positives = 121/235 (51%), Gaps = 7/235 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  M L+ +   +       + K+ V +FVL + L++    L R       + +  
Sbjct: 1   MPQFDLSMLLSGQYHQWLVSGFFLSIKLSVLAFVLALPLAI-TVALLRLAPVALLRGIGQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            Y+    I  +P L  +   Y   F  P +L +F      +++ E  S  IAL  YTAA+
Sbjct: 60  TYVEA--IRNVPLLAHMLFWY---FGAPQILPEFIRDWLYSMNYEAASAVIALVLYTAAY 114

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE +RSG+ ++P+ Q+EA+ ALGL+  +A RLV+LPQ++R  +PPL SQ LNL KNSS+
Sbjct: 115 MAEDIRSGIRSIPKEQLEASRALGLSFLQAMRLVVLPQSLRVTVPPLVSQTLNLWKNSSI 174

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A+ +G A+L+     + + T +  E        YL++SI I +F      +  ++
Sbjct: 175 AMVIGVAELMYQAQQVESATFRGFEAFAFATAAYLTISIAITVFSAWYQHRYPVR 229



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 34/86 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ GF  +  L+    + A  +   V   RL+   L+  I + YVE  RN+P 
Sbjct: 11  SGQYHQWLVSGFFLSIKLSVLAFVLALPLAITVALLRLAPVALLRGIGQTYVEAIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L  + F Y     +LP      +   
Sbjct: 71  LAHMLFWYFGAPQILPEFIRDWLYSM 96


>gi|258404608|ref|YP_003197350.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
 gi|257796835|gb|ACV67772.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfohalobium retbaense DSM 5692]
          Length = 269

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 68/252 (26%), Positives = 111/252 (44%), Gaps = 16/252 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++      +         + I    G +      L      +    KI   S +L +V  
Sbjct: 29  LLWLGGRGAGNLGYNWQWYRISEYIGTVQQGELSLGPLLQGLLVTLKITGVSLLLSLV-- 86

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
            F    +      +     +  I   L+   P L+LI   Y +            IG   
Sbjct: 87  -FGLGAALLRLLPSVMGRLVARIYLELVRNTPLLILIFFIYFV------------IGPLF 133

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F S  +ALS +  A+ +EI R+G++++ RGQ EAA  LGL++    R ++LPQA+R
Sbjct: 134 GIGRFFSAVLALSLFEGAYASEIFRAGIVSIHRGQWEAAYCLGLSNWDMYRKIILPQALR 193

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            IIPPLTSQ ++L+K+S+L   +   DL   G  ++ +T  A E+      +YL L+I +
Sbjct: 194 RIIPPLTSQAVSLVKDSALVSTIAVYDLTMRGQALVAETFLAFEVWFTVAGLYLVLTITL 253

Query: 382 ALFMNRLNAKIA 393
           +     L  K+A
Sbjct: 254 SALAWGLERKMA 265



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 11/122 (9%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           I+  +L+    LW       N+       G  +      + I + I            +L
Sbjct: 19  ILRYVLVMAALLWLGGRGAGNL-------GYNWQW----YRISEYIGTVQQGELSLGPLL 67

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G + T  +    ++ + + G      RL  + +   + R+Y+E+ RN P L++IFF+Y 
Sbjct: 68  QGLLVTLKITGVSLLLSLVFGLGAALLRLLPSVMGRLVARIYLELVRNTPLLILIFFIYF 127

Query: 151 SV 152
            +
Sbjct: 128 VI 129


>gi|167850428|ref|ZP_02475936.1| ABC-type polar amino acid transport system, ATPase component
           [Burkholderia pseudomallei B7210]
          Length = 302

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++    +   + SVL  P     +    FL+   LS    T+   A   +F F LG+ L+
Sbjct: 29  VLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFALGVPLA 88

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGS 260
           L     S          + L      ++  L    L  L   +    P     F  +  +
Sbjct: 89  LARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITFAEVATT 148

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    ++LPQAM
Sbjct: 149 DLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRIVLPQAM 208

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+ +P   +  + L K SS+   +   +L      I  +  + I ++++    YL +  +
Sbjct: 209 RAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWYLIILTV 268

Query: 381 IALFMNRLNAKIALKEKK 398
           +++   ++  + A    +
Sbjct: 269 LSIVQAQVERRYARGAVR 286


>gi|300703460|ref|YP_003745062.1| amino acid transmembrane ABC transporter protein [Ralstonia
           solanacearum CFBP2957]
 gi|299071123|emb|CBJ42435.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum CFBP2957]
          Length = 230

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 18/201 (8%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GIVL L           +      L + +T L++G+    L+ + +  +F  P +    
Sbjct: 42  VGIVLGLC----------RVSPIAVLRWPATALVYGVRGTPLLMVIFWAYFLLPSITG-- 89

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                  + +F ++  AL  +  A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+
Sbjct: 90  -----QRTDQFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVI 144

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIY 374
           LPQA+R+++P L +Q ++ +K +SL   +   ++  +   I      ++ E   +    Y
Sbjct: 145 LPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFITTQISTAVMTKSAETYGLLALSY 204

Query: 375 LSLSIMIALFMNRLNAKIALK 395
            ++   +  F   L  ++A +
Sbjct: 205 FAMCFGLTRFAYLLERRLAAR 225


>gi|145627845|ref|ZP_01783646.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           22.1-21]
 gi|145639302|ref|ZP_01794908.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittII]
 gi|144979620|gb|EDJ89279.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           22.1-21]
 gi|145271605|gb|EDK11516.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           PittII]
 gi|309751178|gb|ADO81162.1| Arginine ABC transporter, permease protein ArtQ [Haemophilus
           influenzae R2866]
          Length = 221

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F    +A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVLA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|330892336|gb|EGH24997.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 231

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F         F +  
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T QA    ++  F+YL L+++    M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFTFYVVAAFMYLGLTVLAMASMYFLEK 220

Query: 391 KIALK 395
           + +  
Sbjct: 221 RASRG 225


>gi|330829214|ref|YP_004392166.1| histidine/lysine/arginine/ornithine ABC transporter permease
           [Aeromonas veronii B565]
 gi|328804350|gb|AEB49549.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           component [Aeromonas veronii B565]
          Length = 257

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 22/209 (10%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--------------------QLHFDK 248
           +    K  +A+   Y  T +I G+P LVL+ L +                     L    
Sbjct: 51  KLSPYKWARAIATGY--TTIIRGIPDLVLMMLLFFGGQVLINGICTWVNETYNSWLLESN 108

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P     + +        F++    +     A++ E  R  ++AV +G++EAA A G+   
Sbjct: 109 PNQEWVSLLPDYIDISPFVAGVATIGFIFGAYMTETFRGAILAVDKGELEAARAFGMRAT 168

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    +L PQ MR  +P   + +L LLK ++L   +G  D+V         T Q     +
Sbjct: 169 QVFVRILFPQMMRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKASLAAGSTQQPFTFYM 228

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I+L  + +    +       A+K +
Sbjct: 229 AVALIFLIFTAVSTSALKWAERHYAIKTR 257


>gi|327395463|dbj|BAK12885.1| inner membrane amino-acid ABC transporter permease protein YhdY
           [Pantoea ananatis AJ13355]
          Length = 366

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 132/340 (38%), Gaps = 54/340 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P+        A+++G  +         I    I  L   GR  
Sbjct: 76  WVFIHARFG-QFMYGLYPHELRWRINLALVIGLAS---------IVPMFIKRLPYRGR-- 123

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +    PLVV F LY   L +  +                     T
Sbjct: 124 -----------YIAAWAVCYPLVVWFLLYGGFLGLDRVETRQ-------------WGGLT 159

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 160 LTLIIASVGIAGALPLGILLAL-----GRRSRMPVVRTLSVIFIEFWRGVPLITVLFMS- 213

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 214 ---------SVMLPLFMAEGTTIDKLVRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 264

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++  IP L +  + L K++SL + +G  DL S         
Sbjct: 265 ESLALGYWKTQMLVILPQALKLTIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 324

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G + E  +    +Y      ++ +   L  +     K
Sbjct: 325 AWLGMSTEGYVFAALVYWIFCFSMSRYSQYLEKRFHTGRK 364


>gi|229588677|ref|YP_002870796.1| glutamate/aspartate ABC transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229360543|emb|CAY47400.1| glutamate/aspartate ABC transport system, permease [Pseudomonas
           fluorescens SBW25]
          Length = 223

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+       V    LG +L+L      R    K    +   Y++ F      ++
Sbjct: 16  WNGMVMTLQLMVMGVVGGIALGTILALM-----RLSSSKLLSRVAGAYVNYFR-----SI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++P+G
Sbjct: 66  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFTSCVVAFMMFEAAYFCEIVRAGVQSIPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA A+G+T+ +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 125 QMAAAQAMGMTYGQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARS 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G++ E ++    +Y  +S   +L + RL  + A+
Sbjct: 185 NGDIIGRSNEFLIFAGVVYFIISFSASLLVKRLQKRFAV 223



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++    +GT++   RLS++KL++ +   YV  FR+IP L+VI + 
Sbjct: 15  LWNGMVMTLQLMVMGVVGGIALGTILALMRLSSSKLLSRVAGAYVNYFRSIPLLLVITWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 75  YLAVPFVLRWITGEDTPIGAFTSCVVAFMMFEAAYFCEI 113


>gi|170720284|ref|YP_001747972.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169758287|gb|ACA71603.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 223

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 7/230 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          L      M    K+ V   + GIVL      L R    K    +   Y+
Sbjct: 1   MEMDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTLL-ALMRLSSNKLLSNIAGAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F      ++ L+ +    +   P + ++   G  T    F S  +A   + AA+  EI
Sbjct: 60  NYFR-----SIPLLLVITWFYLAVPFVLRW-ITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++ +GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   V
Sbjct: 114 VRAGVQSISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D ++   +  +  G++ E ++    +Y  +S   +  + RL  +I +
Sbjct: 174 GLVDFLNSARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRITV 223



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++       A+  G V T  L   G+I   ++GTL+   RLS+NKL++ I   YV  F
Sbjct: 3   MDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTLLALMRLSSNKLLSNIAGAYVNYF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R+IP L+VI + Y +V  VL                               
Sbjct: 63  RSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113


>gi|186472702|ref|YP_001860044.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia phymatum STM815]
 gi|184195034|gb|ACC72998.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia phymatum STM815]
          Length = 223

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 12/209 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I  F  +L I ++  AT  ++       + +  +Y+  F   G   LV +   + +
Sbjct: 14  VTIEIAAFGTLLAIAMAFVATA-AKLAPWAPVRWVGNVYVEVF--RGTSLLVQLFWFFFV 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P   +            F    + L  +  A+ +EI+R  L +VP GQ EAA+AL 
Sbjct: 71  LPLPPFRIEL---------TPFTVAIVGLGLHYGAYGSEILRGALRSVPGGQFEAAVALN 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R ++LPQAM + +PP T+  + LLK +SL   +  +DL      +   T +  
Sbjct: 122 MSAFTRMRRIVLPQAMINALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDEATFKTA 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           EI  + + IY  L+ ++A  M     +++
Sbjct: 182 EIFCLTLIIYFVLAQLLATLMRHFERRVS 210



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 34/72 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A  G + A  +  +  A +L+    V W+  VYVEVFR    LV +F+ 
Sbjct: 8   LLQGTIVTIEIAAFGTLLAIAMAFVATAAKLAPWAPVRWVGNVYVEVFRGTSLLVQLFWF 67

Query: 149 YKSVLSVLPIPD 160
           +  +       +
Sbjct: 68  FFVLPLPPFRIE 79


>gi|310641778|ref|YP_003946536.1| sulfur-containing amino acid abc transporter, permease protein tcym
           [Paenibacillus polymyxa SC2]
 gi|309246728|gb|ADO56295.1| Sulfur-containing amino acid ABC transporter, permease protein TcyM
           [Paenibacillus polymyxa SC2]
          Length = 236

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 106/213 (49%), Gaps = 11/213 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V S + G+V+ +  T L+R ++      +   Y++   I G P L+ + L Y   F
Sbjct: 23  LIITVVSVLAGLVIGII-TALARIYNVPVLSQISHGYVTF--IRGTPMLMHLLLIY---F 76

Query: 247 DKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             P+L       F +   S   P  +   I+ S  + A+++E+VRSG+ +V +GQ+EAA 
Sbjct: 77  SLPLLIDAGAKHFGWSLQSKDVPYMVFALISFSITSGAYMSEVVRSGIQSVNKGQIEAAY 136

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+G+T  +  R ++ PQA    +P LT+  + +L  S+LA  V   ++ +    + +   
Sbjct: 137 AVGMTTWQVLRRIVFPQAFVVSLPNLTNSVIGMLHGSTLAFTVSVTEIQAQAEILASTNW 196

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +E+ +    ++  L+++I      +  KI +
Sbjct: 197 KYLEVYIAAALLFWGLTVLIERISGLVEKKINV 229



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +     NT  +    ++   +IG +    R+    +++ I   YV   R  P L+ +  +
Sbjct: 15  LFSALPNTLIITVVSVLAGLVIGIITALARIYNVPVLSQISHGYVTFIRGTPMLMHLLLI 74

Query: 149 YKSVL 153
           Y S+ 
Sbjct: 75  YFSLP 79


>gi|294676183|ref|YP_003576798.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294475003|gb|ADE84391.1| amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 232

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 2/209 (0%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            + + +   + ++F+  L+         A  LL +    + G P L  + L +     + 
Sbjct: 22  LILTGLGAALAAVFSPGLALIRLSGPAPAKVLLRVYISFMRGTPLLAQLFLVFYGS-GQF 80

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                     S     F    +     + A+  EI+R GL AVP G++EAA A+G+T  +
Sbjct: 81  RAELTTLGLWSFFRDPFNCAVLVFVLNSCAYQTEILRGGLQAVPPGEIEAARAIGMTRAQ 140

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V  P A R   P L ++ + L+K S+LA  V   DL+     I +++ +   +   
Sbjct: 141 VLARVTFPHAYRIAWPALGNEVILLMKASALASIVTVFDLMGRTRQIFSRSFE-FSVYFE 199

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +YL ++++      ++  ++    ++
Sbjct: 200 AAVLYLLITVLFVFLWRQIERRLTRPMRR 228



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 26/80 (32%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L   G   A +    +   RLS       + RVY+   R  P L  +F +
Sbjct: 14  LLDGLETTLILTGLGAALAAVFSPGLALIRLSGPAPAKVLLRVYISFMRGTPLLAQLFLV 73

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           +              +  F 
Sbjct: 74  FYGSGQFRAELTTLGLWSFF 93


>gi|238026653|ref|YP_002910884.1| Polar amino acid ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237875847|gb|ACR28180.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 229

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +AL   Y  T LI  +P LVL+ L +                       F++
Sbjct: 39  KLSTHRVLRALATAY--TTLIRSVPDLVLMLLLFYSIQIWLNQITDLLGWDQIDIDPFVA 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   ++VPRGQ+EA  A G++  +    +L PQ MR  +P + 
Sbjct: 97  GVLTLGFIYGAYFTETFRGAFLSVPRGQLEAGAAYGMSGMRVFTRILFPQMMRFALPGIG 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T +    IL+   +YL+++ +  L + +L
Sbjct: 157 NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFKMFFFILVAALVYLAITTLSNLVLRQL 216

Query: 389 NAKIALKEKK 398
             + +L  + 
Sbjct: 217 ERRYSLGVRH 226


>gi|209695502|ref|YP_002263431.1| general L-amino acid ABC transporter permease protein [Aliivibrio
           salmonicida LFI1238]
 gi|208009454|emb|CAQ79740.1| general L-amino acid ABC transporter permease protein [Aliivibrio
           salmonicida LFI1238]
          Length = 365

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 16/244 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGK 217
                 F ++    GL      +     I +   ++GIV+SL    A  L R       +
Sbjct: 132 FPFFAAFLLYGGVFGLPVVDTHLWGGLLITLVIAIVGIVVSLPIGVALALGRRSEMPIIR 191

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           ++  +YI  +    L T++ +A           +    F+       +     I +  ++
Sbjct: 192 SMCTIYIEIWRGVPLITVLFMA----------SVMLPLFLSEGMELDKLFRALIGVVLFS 241

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AE++R GL A+P+GQ EAA ALGL + K  RL++LPQA++  IP + + ++ L K+
Sbjct: 242 AAYMAEVIRGGLQAIPKGQYEAADALGLGYWKKMRLIILPQALKITIPSIVNTFIGLFKD 301

Query: 338 SSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +SL + +G  D++ +G          G + E  +    ++      ++ +   L  K+  
Sbjct: 302 TSLVLIIGMFDVLGIGQAANTDPEWLGFSTESYVFVALVFWVFCFSMSRYSIYLENKLHT 361

Query: 395 KEKK 398
             K+
Sbjct: 362 GHKR 365


>gi|170722936|ref|YP_001750624.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169760939|gb|ACA74255.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 232

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    +      + T  K+   S   G+++++    L R   +        LY 
Sbjct: 1   MIFDYNVIWEAMPLYLGGLLTTLKLLAISLFFGLLVAVPLG-LMRVSKQPVVNLTAWLY- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAF 280
            T++I G P LV + L Y        L QF  +  S   P          +A +  T+A+
Sbjct: 59  -TYVIRGTPMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFAVNTSAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +SL
Sbjct: 112 TAEIIAGSLKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 172 ASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAERR 222


>gi|254237453|ref|ZP_04930776.1| hypothetical protein PACG_03528 [Pseudomonas aeruginosa C3719]
 gi|126169384|gb|EAZ54895.1| hypothetical protein PACG_03528 [Pseudomonas aeruginosa C3719]
          Length = 230

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               F              S VLG++L  F+  + R         +  +Y+S F   G P
Sbjct: 20  MAWPFLLQGAMYTVLFAAVSMVLGLILG-FSVAVVRVTKVPVVSQIAAVYVSAF--RGTP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I + Y                         +  +AL+   AA ++E +R  ++ + 
Sbjct: 77  LLVQIFVLYY-----------GLPSVGIEFTPVTAGILALTLNVAASLSESMRGAILGID 125

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA +++GLT  +    ++ PQA+R  +P L++  ++L+K++SL   +   +L+   
Sbjct: 126 KGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLAT 185

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +I +T Q + + L    IY  LS +       L  ++    ++
Sbjct: 186 KEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR 230



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 37/87 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G + T   A   M+   I+G  V   R++   +V+ I  VYV  FR  P LV I
Sbjct: 22  WPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQI 81

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           F LY  + SV             + LN
Sbjct: 82  FVLYYGLPSVGIEFTPVTAGILALTLN 108


>gi|317052938|ref|YP_004119292.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953265|gb|ADU72736.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 223

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 17/228 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+       +F  + G+VL++      ++   ++ +   ++ I  +   
Sbjct: 13  YRMLLLEGLWGTIQIGVTSIIFGMLAGMVLAIM-----KNSSLRSLRIPAMVLIGFYRNT 67

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                  I   + +++  PV+              F +  +ALS  +AAF AE+ R G+ 
Sbjct: 68  PA-----IVHFFWIYYALPVISPLTL-------SPFAAAVLALSAQSAAFYAEVYRGGIQ 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQ E A ALG+    A R ++ PQA+R +IPP   +   LLK+++LA ++ +++L+
Sbjct: 116 SISAGQWEGAKALGMPRSTALRRIIFPQALRRMIPPFLERSFELLKSTALASSLAYSELL 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                + +QT + +E+  +   +Y +L ++I+     +  ++A+ + +
Sbjct: 176 YQAMQVNSQTYRPLEVYSVIAVMYFTLLLIISQCSQVIEKRLAVSDVR 223



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 36/80 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + +   Y   +L G   T  +  + +I   + G ++   + S+ + +     V +  +R
Sbjct: 6   DFAAIWPYRMLLLEGLWGTIQIGVTSIIFGMLAGMVLAIMKNSSLRSLRIPAMVLIGFYR 65

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
           N P +V  F++Y ++  + P
Sbjct: 66  NTPAIVHFFWIYYALPVISP 85


>gi|220923581|ref|YP_002498883.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948188|gb|ACL58580.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 216

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 13/189 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +  +   + YI  F   G P L+ + L Y +            I G ++ P + +
Sbjct: 41  RTGEIRPLRFAAMAYIKLF--QGTPLLMQLFLAYFVP----------GIFGLSIDP-WGA 87

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + LS + +AF+ EI R  +  VPRGQ EAA ALGL +     LV++PQA+R  +PP  
Sbjct: 88  AALGLSLHASAFLGEIWRGSIETVPRGQWEAATALGLRYWPRMALVIVPQAVRIAVPPTI 147

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + L+K +SLA  +GF +L      I N T +   +  +   +Y  +   ++ +  R+
Sbjct: 148 GFLVQLIKGTSLASIIGFVELTRAAQIINNATFRPFTLFGLVALVYFVICWPLSAYSRRI 207

Query: 389 NAKIALKEK 397
               A+  +
Sbjct: 208 EKTFAVASR 216


>gi|227819411|ref|YP_002823382.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227338410|gb|ACP22629.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 219

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  I + S V+G VL +F   L+  +  +  K L   Y     I G P LVL+   Y +
Sbjct: 22  VSISISLLSIVVGTVLGVFVG-LALTYGYRPVKWLVRGYTDF--IRGTPVLVLVLASYYV 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F +  +AL+ + ++ + E+VR  L ++P+GQ EAA A+G
Sbjct: 79  -----------LSTVGIDLGPFQAGILALAVFCSSHVGELVRGALQSIPKGQTEAAKAIG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    VL PQA+R  +P   +    ++K S+L   +G  +L+     +I++T  ++
Sbjct: 128 LTFPQTFAYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVGELLLRTQEVISRTFMSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E      F+Y  ++  I  F   +  K A+
Sbjct: 188 EFYFFAGFLYFVINYGIERFGRYVERKTAV 217



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  ++   ++  T++G  VG       + V W+ R Y +  R  P LV++   
Sbjct: 16  LLKGLGVSISISLLSIVVGTVLGVFVGLALTYGYRPVKWLVRGYTDFIRGTPVLVLVLAS 75

Query: 149 YKSVLSVLPI 158
           Y  + +V   
Sbjct: 76  YYVLSTVGID 85


>gi|28897774|ref|NP_797379.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153837342|ref|ZP_01990009.1| membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|260363801|ref|ZP_05776556.1| membrane protein [Vibrio parahaemolyticus K5030]
 gi|260876939|ref|ZP_05889294.1| membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|260897919|ref|ZP_05906415.1| membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|260903454|ref|ZP_05911849.1| membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|28805987|dbj|BAC59263.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149749373|gb|EDM60146.1| membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|308085455|gb|EFO35150.1| membrane protein [Vibrio parahaemolyticus Peru-466]
 gi|308093658|gb|EFO43353.1| membrane protein [Vibrio parahaemolyticus AN-5034]
 gi|308110352|gb|EFO47892.1| membrane protein [Vibrio parahaemolyticus AQ4037]
 gi|308113882|gb|EFO51422.1| membrane protein [Vibrio parahaemolyticus K5030]
 gi|328473250|gb|EGF44098.1| amino acid ABC transporter permease [Vibrio parahaemolyticus 10329]
          Length = 246

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 99/233 (42%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ V S +L ++L      L++    K  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  VTIEVAVLSLLLAVILG-MLGALAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDKGELEAAKAYGMSPVLSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V +       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLEDMVRMSSLAAGTTKMPFTFYMAVALIFLFFTSISTGLLKLVERKFSIHAR 246



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A I+G L    +L+  K    I  +Y  + R IP LV+
Sbjct: 7   YEASIFKGALVTIEVAVLSLLLAVILGMLGALAKLAPYKWARAIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|209517852|ref|ZP_03266686.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501685|gb|EEA01707.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 229

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S      L L     ++    +    +  LY  T LI  +P LVL+ L + 
Sbjct: 15  WVTIKLAVLSLAASFALGLVGAA-AKLSTNRVVARIGTLY--TTLIRAVPDLVLMLLLFY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F         F++  I L     A+  E  R   +AVPRGQ+EA  A 
Sbjct: 72  SIQIWLNQLTDMFSMEQIDIDPFLAGVITLGFIYGAYFTETFRGAFLAVPRGQIEAGFAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++ R+    +L PQ MR  +P + + +  L+K ++L   +G AD+V         T   
Sbjct: 132 GMSARRVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTQSF 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L    IYL+++ +  L +NRL  + ++  ++
Sbjct: 192 FFFTLATGAIYLAITTISNLVLNRLEKRYSIGVRR 226


>gi|111021335|ref|YP_704307.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110820865|gb|ABG96149.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 243

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 13/180 (7%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           H    +     +I  F   G   LV +   + L +  P+           +    +   +
Sbjct: 47  HNIVIRGSARAFIEFF--RGTSLLVQL---FWLFYVVPLF--------GYLLDPVLCGIL 93

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL     A+ AE+VR  + +VP+ Q EAA AL  +H +  R V+ PQA   +IPPLT+  
Sbjct: 94  ALGLNYGAYGAEVVRGAINSVPQSQWEAATALDFSHWQRLRRVVFPQAWAEMIPPLTNLL 153

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + LLK ++LA  +   DL      +   TG  +    + + IY  +  ++ L MN L  +
Sbjct: 154 IQLLKGTALASYILLQDLTFEIDQLRQTTGNTLFAFGVGLVIYFVIGYVLTLVMNALEVR 213


>gi|238759569|ref|ZP_04620731.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia aldovae ATCC 35236]
 gi|238702228|gb|EEP94783.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia aldovae ATCC 35236]
          Length = 245

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 8/228 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR------LSRHFHEKTGKALPLLYISTF 227
                  LT+  +A   V S +LG +L+                +    +  PLL    F
Sbjct: 18  WLWHGFLLTLWISACTVVASTLLGFLLAAARDSELNGLQWLAIGYSTLFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             F    L+  +    L  + P    F  +     S EF++ +I L+CY+ AFIAE +R+
Sbjct: 78  WYFAASQLLPASWIPWL--NTPHEITFFGLTLGWPSFEFLAGFIGLTCYSTAFIAEELRA 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V +GQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A
Sbjct: 136 GISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      +  +T +  +   +   +Y+++  +I  +      + A K
Sbjct: 196 ELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQRTAAK 243



 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 42/89 (47%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ +T++G L+ A R S    + W+   Y  
Sbjct: 5   HLTDWLLAPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAARDSELNGLQWLAIGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +   +LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQLLPASWIPW 93


>gi|225374914|ref|ZP_03752135.1| hypothetical protein ROSEINA2194_00537 [Roseburia inulinivorans DSM
           16841]
 gi|225213235|gb|EEG95589.1| hypothetical protein ROSEINA2194_00537 [Roseburia inulinivorans DSM
           16841]
          Length = 250

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 102/249 (40%), Gaps = 15/249 (6%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---TRLSR 209
           ++  P      ++      +   L     T++T+    +    LG ++ +      R   
Sbjct: 1   MTNTPTTFFGWIIFLIQQYHGYYLQGLLTTLETSLAGTICGCFLGFLVGIIQATDIRAQD 60

Query: 210 HFHEKTGKALPLLY--ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +  +K    +P +   I   +  G P +V   + Y            + + G  + P F 
Sbjct: 61  NMIKKILLGIPWVIAKIYVTIFRGTPMIVQAMVIYYGS---------STVFGIDLKP-FN 110

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +    +   T A+++E VR G+ ++  GQ+E A ALG+ +      ++LPQ  + I P +
Sbjct: 111 AAIFIILLNTGAYMSETVRGGINSIDVGQIEGAKALGMGYVPMMIYIILPQTFKIIAPQI 170

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + ++  +K++S+   +   +L  +         +  E   I   IYL+L+++    +  
Sbjct: 171 GNTFVANIKDTSVLNVIAVTELFYITKVAAGTYFRMFEAYTITALIYLTLTLLFNGLLKL 230

Query: 388 LNAKIALKE 396
           +   +A KE
Sbjct: 231 IEKYMAGKE 239


>gi|254471177|ref|ZP_05084579.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211959323|gb|EEA94521.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 324

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F+  +          T   +   S  L    +L     ++       + +   Y S F  
Sbjct: 110 FIGRKLPFLLGTGAFTTLYVSAISISLAFAFALMG-ATAKLSGIGVVEGVGAFYTSYF-- 166

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LV + L Y                   V     +  IALS    A++ EI RSG+
Sbjct: 167 RGVPLLVQLFLIY-----------LGLPQIGYVISPVPAAIIALSLVYGAYMTEIFRSGI 215

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++  GQ EAA ALGL      R V+LPQAMR I+PP  +Q++ +LK+SSL   VG  D+
Sbjct: 216 QSISVGQWEAADALGLQRLLTFRKVILPQAMRVIVPPTGNQFIAMLKDSSLVSVVGVWDI 275

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +  T      + +E+++    IY  +S+M+     R+    A   K+
Sbjct: 276 MFIARTQGRSDFKILEMLITASIIYWVMSVMLEFVQQRIENHYAKSLKR 324



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 9/98 (9%)

Query: 58  SLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAG 117
           + G  FLS    FE     +P+         +  G   T +++   +  A     +    
Sbjct: 97  AFGF-FLSFELSFEFIGRKLPFL--------LGTGAFTTLYVSAISISLAFAFALMGATA 147

Query: 118 RLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           +LS   +V  +   Y   FR +P LV +F +Y  +  +
Sbjct: 148 KLSGIGVVEGVGAFYTSYFRGVPLLVQLFLIYLGLPQI 185


>gi|242239984|ref|YP_002988165.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132041|gb|ACS86343.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 238

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 95/230 (41%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   L+   +T+       V   +L + L++      R F          
Sbjct: 6   QQYWQALLWSDGYRLTGLAMTLWLLISSVVVGGLLAVPLAVARVSPRRRFSLPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +  T++  G P  V + + Y   +    +   + +  +          +AL+  T A+ 
Sbjct: 60  -WAFTYVFRGTPLYVQLLVFYSGVYSLEFVRGTDLL-NAFFRSGLNCAILALALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA
Sbjct: 118 TEIFAGAIRSVPYGEIEAARAYGFSRFKQYRSIILPGALRIALPAYSNEVILMLHSTALA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   D++ +   I   T +      I   +YL++S ++     +   +
Sbjct: 178 FTVTVPDILKITRDINAATYKPFHAFGIAAVMYLAISFVLVSLFRKAERR 227


>gi|209693641|ref|YP_002261569.1| putative amino-acid ABC transporter, permease protein [Aliivibrio
           salmonicida LFI1238]
 gi|208007592|emb|CAQ77692.1| putative amino-acid ABC transporter, permease protein [Aliivibrio
           salmonicida LFI1238]
          Length = 223

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 12/185 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFM 267
           R F       L  LYIS F   G P LV + L Y  L    P+    +          F 
Sbjct: 44  RVFKVPVLDQLSQLYISFF--RGTPLLVQLFLLYYGLPQVFPIFVGLD---------AFS 92

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L+ + AA++AE +R+ +I V R QMEA++++G+T  +A R ++LPQA R  +P L
Sbjct: 93  AAVIGLTLHFAAYMAESIRAAIIGVDRSQMEASLSIGMTTSQAMRRIILPQATRIALPSL 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +++++K++SLA  +G +++++      + + +  E  L    IY  + I++      
Sbjct: 153 MNYFIDMIKSTSLAFTLGVSEIMAKAQMEASSSFKFFEAFLAVALIYWGVVIILTQVQTW 212

Query: 388 LNAKI 392
              K+
Sbjct: 213 AEKKL 217


>gi|167034985|ref|YP_001670216.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166861473|gb|ABY99880.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 229

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P  ++    L     A+++E  R   + +P+GQ EA +
Sbjct: 71  GGQDIINRVAPLLGYEDYIDLNP-LIAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEAGV 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G+++R+    + +PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSNRQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL L+ +  L +  L  + ++  K
Sbjct: 190 EPFTFFLAVAALYLVLTSVSLLALKYLERRYSVGVK 225



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     ++      +     + LN 
Sbjct: 65  ILLIFYGGQDIINRVAPLLGYEDYIDLNP 93


>gi|302393017|ref|YP_003828837.1| amino acid ABC transporter membrane protein, PAAT family
           [Acetohalobium arabaticum DSM 5501]
 gi|302205094|gb|ADL13772.1| amino acid ABC transporter membrane protein, PAAT family
           [Acetohalobium arabaticum DSM 5501]
          Length = 222

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 101/229 (44%), Gaps = 11/229 (4%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F               ++    + + S + GI++++           K     PL  
Sbjct: 1   MQSFSFDFALNLFPLMLKRLNITLGMSLLSLLFGIIIAIIIAI---IIQTKVKILYPLTK 57

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +      G P +  +   + L+F  P L     I     +  F    + LS  + A+++E
Sbjct: 58  VYVSFFRGTPLITQL---FFLYFGLPQL-----IPVLKEASGFTIAIMGLSLNSGAYMSE 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R  + +V +GQMEAA+++G+T+ +A + ++LPQA R  IP L++ ++N++K ++L   
Sbjct: 110 AIRGAISSVEKGQMEAALSVGMTYLQAMKRIILPQAARVAIPALSNSFINIIKGTALTFT 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G  ++++          +  E     + IY  +  + +    +L  K+
Sbjct: 170 IGVTEVMATAQMEGAAAYRYFEAFTNVIIIYWGIVQLFSYLQKKLEIKM 218


>gi|298379891|ref|ZP_06989496.1| glnP [Escherichia coli FVEC1302]
 gi|298279589|gb|EFI21097.1| glnP [Escherichia coli FVEC1302]
          Length = 159

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 9/167 (5%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P +V +   Y   F  P+               F +  + +   + A+IAEI R 
Sbjct: 1   MIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEITRG 51

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +G A
Sbjct: 52  AVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVIGVA 111

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L   G  II    +A+EI       YL ++++++  + RL  ++ +
Sbjct: 112 ELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI 158


>gi|291458995|ref|ZP_06598385.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418249|gb|EFE91968.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 231

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +    ++   SFVL ++L++F   +  +F     +    LY+S F   G P L  + 
Sbjct: 14  MRALPITLELTAVSFVLSLLLAVFI-AVIDYFKVPVLRQFFALYVSFF--RGTPLLPQLF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L   L+F  P      FI      P  +   I L+   AA++ E+VR  L++VP GQ EA
Sbjct: 71  L---LYFGIPT-----FIKPLRSIPAIVICTIGLTLNAAAYMKEVVRGALLSVPEGQREA 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+A G++  +    ++LPQA R  IP L +  ++++K SS+A  +G  ++ +      + 
Sbjct: 123 ALAHGMSETRTMTRIVLPQAARVAIPSLFNNLVDIVKGSSMAFTIGVVEITAAANLRASV 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           T    E  +I M +Y  + +++    +        
Sbjct: 183 TFNYFEAYMILMLVYWLIILLLERLESAAEKHFDR 217



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 29/82 (35%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +    S   AI+     T  L     + + ++   +         ++     +YV  F
Sbjct: 1   MDWVFAESCTKAIMRALPITLELTAVSFVLSLLLAVFIAVIDYFKVPVLRQFFALYVSFF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPI 158
           R  P L  +F LY  + + +  
Sbjct: 61  RGTPLLPQLFLLYFGIPTFIKP 82


>gi|184199755|ref|YP_001853962.1| putative amino acid ABC transporter permease protein [Kocuria
           rhizophila DC2201]
 gi|183579985|dbj|BAG28456.1| putative amino acid ABC transporter permease protein [Kocuria
           rhizophila DC2201]
          Length = 224

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 13/182 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +  + +   Y+  F   G P LV + + +                       + S
Sbjct: 45  RLSGIRPLQWISRFYVWLF--RGTPILVQLFIIFY-----------GLPAAGITLSAWTS 91

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +A +  T A+ AE +R+ + ++PRGQ+EAA  L  T  +  R V+ PQA+R  +PPL 
Sbjct: 92  AILAFTLNTGAYAAETLRASVQSIPRGQLEAARTLNYTGWQTVRHVVAPQALRIALPPLG 151

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  ++L+K +SL + +  AD+  VG  I     Q + +      IYL++  +++L  +RL
Sbjct: 152 NDLIDLVKGTSLVMVITLADVFQVGRQIAATNFQPLALYAEVAVIYLAIFTVLSLLQSRL 211

Query: 389 NA 390
             
Sbjct: 212 ER 213



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S    +L     T  L+    + A ++  L  A RLS  + + WI R YV +FR  P 
Sbjct: 9   ADSLPQLLLATVKVTIPLSIIAFVLALVVAVLATAMRLSGIRPLQWISRFYVWLFRGTPI 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + +                LN
Sbjct: 69  LVQLFIIFYGLPAAGITLSAWTSAILAFTLN 99


>gi|330429804|gb|AEC21138.1| polar amino acid ABC transporter, inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 225

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 102/238 (42%), Gaps = 20/238 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---TRLSRHF---HEKT 215
            +                 L++       + + ++G+ L+L       L+  F   +   
Sbjct: 1   MMDADLFQHTIVNLFQGFGLSVYIGLTSILLASLIGLALALMRGTPNTLAARFSFAYSTC 60

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PLL     L +G+ TL  +        + PVL      GG           +A+  
Sbjct: 61  FRGTPLLVQLFILYYGIGTLGFV-------RESPVLWWLFSDGGR-------CAILAIGL 106

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            + A+++E++R G  +VP+GQ+EAA A G++     R ++ P A+R  +P  +++ +  +
Sbjct: 107 NSGAYVSEVLRGGFQSVPKGQIEAAQACGMSALMRFRRIVFPLAIRQALPAYSNEIVLAI 166

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           K +SLA  +   +L      ++NQ    IE  ++   +YL ++  +   ++ +  ++ 
Sbjct: 167 KGTSLASTIAVMELTGHAKRLMNQNYAIIETFVLAGALYLMINFSLLACLHMVERRLK 224



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 37/78 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  GF  + ++  + ++ A++IG  +   R + N L A     Y   FR  P LV +F L
Sbjct: 14  LFQGFGLSVYIGLTSILLASLIGLALALMRGTPNTLAARFSFAYSTCFRGTPLLVQLFIL 73

Query: 149 YKSVLSVLPIPDHSIVLP 166
           Y  + ++  + +  ++  
Sbjct: 74  YYGIGTLGFVRESPVLWW 91


>gi|327486002|gb|AEA80408.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 265

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 34  MGYTWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 89  RQSHSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 254

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 255 EHKLGAQWR 263



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 6   FRPLLFAALQMILVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGE 54

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 55  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSHSLVGRALGTGYIAVVRNTPLLV 114

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 115 QIYLLYFVF 123


>gi|317053655|ref|YP_004118789.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952760|gb|ADU72233.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 218

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 13/228 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++   +      +     + + +F  G V+ L    ++R  H++  +A+   Y       
Sbjct: 4   ISIHDIWMIISALRWTLLLALCTFACGAVIGLLV-AVARTSHQRGLQAVAWFY------- 55

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                V +     L     +L     +        F +  +A S    AF+ EI R  ++
Sbjct: 56  -----VELVQGIPLLGMLFLLFFGMPVFLGIDVSSFTAALVAFSLSAGAFLGEIWRGSIM 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EA+++LG++  +  R V+LPQA+R  +PP     + L+KN+SLA  VGF +L 
Sbjct: 111 AVPKGQWEASLSLGISRLQMLRTVILPQALRLSLPPTVGFSVQLIKNTSLAALVGFVELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G  +   T Q + I L+    Y +L   +A     L A+  +  + 
Sbjct: 171 RSGQIVSGSTLQPLLIYLLVALCYFALCFPLARLSLHLEARFHVAGRH 218



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 22/54 (40%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             I+     T  LA        +IG LV   R S  + +  +   YVE+ + IP
Sbjct: 10  WMIISALRWTLLLALCTFACGAVIGLLVAVARTSHQRGLQAVAWFYVELVQGIP 63


>gi|115352501|ref|YP_774340.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|170703754|ref|ZP_02894469.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|172061358|ref|YP_001809010.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115282489|gb|ABI88006.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|170131337|gb|EDS99949.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171993875|gb|ACB64794.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 229

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 78/175 (44%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T LI G+P LVL+ L +                       F++  + L     A+  E
Sbjct: 52  VYTTLIRGVPDLVLMLLLFYSLQIWLNSATDALGWDQIDIDPFLAGVLVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   ++VPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  L+K+++L   
Sbjct: 112 TFRGAFLSVPRGQLEAGSAYGMTSWQVFARIMFPQMMRFALPGIGNNWQVLVKSTALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     LI   +YL+++ +    +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAITTISNFVLMWLEKRYSTGVRK 226


>gi|330966764|gb|EGH67024.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 229

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVVRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + +   +
Sbjct: 190 ETFTFFLAVAAMYLVITSVSLLALRYLEKRYSAGVR 225



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|256851551|ref|ZP_05556940.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii 27-2-CHN]
 gi|260660974|ref|ZP_05861889.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii 115-3-CHN]
 gi|282932630|ref|ZP_06338046.1| probable amino-acid ABC transporter permease protein [Lactobacillus
           jensenii 208-1]
 gi|297206366|ref|ZP_06923761.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
 gi|256616613|gb|EEU21801.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii 27-2-CHN]
 gi|260548696|gb|EEX24671.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii 115-3-CHN]
 gi|281303262|gb|EFA95448.1| probable amino-acid ABC transporter permease protein [Lactobacillus
           jensenii 208-1]
 gi|297149492|gb|EFH29790.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus jensenii JV-V16]
          Length = 220

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 15/224 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L F    +    ++ + S VL  ++ L    L    + K      ++ +   +I 
Sbjct: 8   YSPTNLRFLFEGLLVTVEVSIISIVLSYIIGLI---LGTIRYMKIKYVSAIVGVIIDIIR 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LP L++I   Y           F F      +  F +   AL  + +A +AEIVR G+ 
Sbjct: 65  NLPLLLIIFFTY-----------FGFPELGIHASPFWAAISALVIFESAMLAEIVRGGIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQME A + G+T+ +A R V++PQAM  ++P L SQ+++L+K++SLA  +   +L+
Sbjct: 114 AVPDGQMEGARSNGMTYLQAMRYVIMPQAMHMMMPALLSQFVSLVKDTSLATIIILPELL 173

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I +Q T   I + LI   +Y  +   ++LF  RL  K+ 
Sbjct: 174 YHAQIIYSQNTTYMIPMYLIIAAMYFVVCFALSLFAQRLRKKLG 217



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 37/82 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +    +  G + T  ++   ++ + IIG ++G  R    K V+ I  V +++ RN+P 
Sbjct: 9   SPTNLRFLFEGLLVTVEVSIISIVLSYIIGLILGTIRYMKIKYVSAIVGVIIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           L++IFF Y     +        
Sbjct: 69  LLIIFFTYFGFPELGIHASPFW 90


>gi|199599085|ref|ZP_03212491.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229553195|ref|ZP_04441920.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258509001|ref|YP_003171752.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258540195|ref|YP_003174694.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|199590048|gb|EDY98148.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229313491|gb|EEN79464.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257148928|emb|CAR87901.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257151871|emb|CAR90843.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259650294|dbj|BAI42456.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 220

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T++ +     FSFVLG++L L      ++F    G          F+I  +
Sbjct: 14  RYLLQGLGVTLEVSIASIFFSFVLGVILGLARYVKIKYFSAAVG----------FVIDVI 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + +  +F  P +               ++  +A+S + +A +AEIVRSG+ AV
Sbjct: 64  RNLPLLLILFFTYFALPDI--------GIRLNVIVAAIVAMSIFESAMLAEIVRSGINAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA  +   +    
Sbjct: 116 PRGQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYH 175

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I  Q     I + +    +Y  ++  ++L    L+ ++
Sbjct: 176 AQIIYGQNINYMIPMFVALAVMYFVVNYALSLASRWLDRRL 216



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 35/77 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++ + +  + ++G ++G  R    K  +      ++V RN+P 
Sbjct: 9   SWINLRYLLQGLGVTLEVSIASIFFSFVLGVILGLARYVKIKYFSAAVGFVIDVIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPI 158
           L+++FF Y ++  +   
Sbjct: 69  LLILFFTYFALPDIGIR 85


>gi|94309637|ref|YP_582847.1| amino acid ABC transporter permease [Cupriavidus metallidurans
           CH34]
 gi|93353489|gb|ABF07578.1| ABC-type transporter, permease component: PAAT family [Cupriavidus
           metallidurans CH34]
          Length = 230

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V +  +GIVL L      R    +T +    + I  +++ G P L    + +  
Sbjct: 31  LAASGLVLALPVGIVLGLC-----RVSPFRTLRWPATVLI--YVVRGTPLL---MVVFWA 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P +           +P+F ++ +AL  +  A++AEIVR+G+  +PRGQME+A +LG
Sbjct: 81  YFLLPSVTG-------HRTPQFATMLVALVVFDGAYLAEIVRAGIQGLPRGQMESARSLG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QA 363
           L++ +A  LV+LPQA+R+++P L +Q ++ +K +SL   +   ++  + G I  Q   QA
Sbjct: 134 LSYAQAMALVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFIAGQISTQMLTQA 193

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            ++ L+    Y  +   +      L  ++A +
Sbjct: 194 AQVYLLLALSYFVMCFGLTRCAYLLERRLAAR 225



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 36/74 (48%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  LA SG++ A  +G ++G  R+S  + + W   V + V R  P L+V+F+ Y
Sbjct: 22  LGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTLRWPATVLIYVVRGTPLLMVVFWAY 81

Query: 150 KSVLSVLPIPDHSI 163
             + SV        
Sbjct: 82  FLLPSVTGHRTPQF 95


>gi|28898396|ref|NP_798001.1| amino acid ABC transporter permease [Vibrio parahaemolyticus RIMD
           2210633]
 gi|28806613|dbj|BAC59885.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus RIMD 2210633]
          Length = 368

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 113/263 (42%), Gaps = 15/263 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       V S  +G+
Sbjct: 118 TPKRLWIWLFFVNIYPFIVAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 177

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A      F          I 
Sbjct: 178 ALAL-----GRRSDMPIIRSICTIYIEVWRGVPLITVLFMASVMLPLFLAEGSETDKLIR 232

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                   +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++LPQ
Sbjct: 233 A-------LRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQ 285

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 286 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 345

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 346 VFCFGMSRYSIWLENKLHTGHKR 368



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG  +  GR S   ++  IC +Y+EV+R +P + V+F     
Sbjct: 157 GLLVTLIIALVGIVVSLPIGVALALGRRSDMPIIRSICTIYIEVWRGVPLITVLFMASVM 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG-------IVLSLFA 204
           +   L     +  L   +      + F    M    +  + +   G       + LS + 
Sbjct: 217 LPLFLAEGSETDKLIRALRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWK 276

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVS 263
                   +     +P +  +   +F   +LVLI   +  L   +       ++G +T S
Sbjct: 277 KTGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATES 336

Query: 264 PEFMSLYIALSCYTAAFIA 282
             F++L   + C+  +  +
Sbjct: 337 YVFVALVFWVFCFGMSRYS 355


>gi|149204303|ref|ZP_01881270.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. TM1035]
 gi|149142188|gb|EDM30235.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. TM1035]
          Length = 200

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 92/188 (48%), Gaps = 2/188 (1%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R    K    L   Y+  F    +P LV + + Y    +        ++      PEF
Sbjct: 7   VGRTLPNKVVSTLCTTYVELF--RNVPLLVQMFIWYFAVPEMLPEDAGRWMKRDMPQPEF 64

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  +AL  YTA+ +AE VR+G+ AVP G   AA A G+   +  R VLLP + R I+PP
Sbjct: 65  VTAVVALGLYTASRVAEQVRAGIEAVPSGLKSAATAQGMGVAQVYRYVLLPISFRLIVPP 124

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +TS++L + KNSSLA+ +G  +L +    I   T Q+ E       IY+ +++   + M 
Sbjct: 125 MTSEFLTVFKNSSLALTIGLLELTAQSQQIAEYTFQSFEAYTAATVIYVFIALCATIVMT 184

Query: 387 RLNAKIAL 394
            L     +
Sbjct: 185 VLERYTRI 192



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 35/58 (60%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           +G+LVG GR   NK+V+ +C  YVE+FRN+P LV +F  Y +V  +LP      +   
Sbjct: 1   MGSLVGVGRTLPNKVVSTLCTTYVELFRNVPLLVQMFIWYFAVPEMLPEDAGRWMKRD 58


>gi|204929308|ref|ZP_03220451.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|204321852|gb|EDZ07051.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|322617097|gb|EFY14003.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617597|gb|EFY14496.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624773|gb|EFY21602.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322630323|gb|EFY27093.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634503|gb|EFY31236.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322639214|gb|EFY35906.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322640077|gb|EFY36744.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322645703|gb|EFY42227.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652067|gb|EFY48430.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656239|gb|EFY52536.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659391|gb|EFY55638.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322665851|gb|EFY62034.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669910|gb|EFY66051.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322678654|gb|EFY74710.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322683551|gb|EFY79565.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322687626|gb|EFY83596.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323193539|gb|EFZ78744.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198446|gb|EFZ83548.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323204558|gb|EFZ89561.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208504|gb|EFZ93443.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323213642|gb|EFZ98431.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218323|gb|EGA03033.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222922|gb|EGA07271.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323224503|gb|EGA08785.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323232318|gb|EGA16421.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235648|gb|EGA19732.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323241192|gb|EGA25228.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323244934|gb|EGA28936.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323250053|gb|EGA33947.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323253837|gb|EGA37662.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323254974|gb|EGA38765.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323259839|gb|EGA43471.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264140|gb|EGA47647.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323270838|gb|EGA54276.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
          Length = 235

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 96/223 (43%), Gaps = 8/223 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++ +    +   +T+       V   +L ++L++     ++             ++ T++
Sbjct: 13  LWTDGYRFTGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIRFPI-------WLFTYI 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI    
Sbjct: 66  FRGTPLYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      D
Sbjct: 125 IRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+ +   I + T Q      I   +YL +S ++     R   +
Sbjct: 185 LLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERR 227


>gi|167745442|ref|ZP_02417569.1| hypothetical protein ANACAC_00133 [Anaerostipes caccae DSM 14662]
 gi|317473006|ref|ZP_07932308.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
 gi|167655163|gb|EDR99292.1| hypothetical protein ANACAC_00133 [Anaerostipes caccae DSM 14662]
 gi|316899515|gb|EFV21527.1| inner membrane transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 223

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 14/220 (6%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 +D    IF  + V G+ L L    L R    K  +     Y    ++ G P ++
Sbjct: 18  MLLHNGLDQTLIIFFLTLVFGLTLGLVL-ALGRMTRFKIIQLPVRFY--LLIMRGTPLIL 74

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            +   Y  +F   +L               M+  +A S   AA+ AEI RSG+ A+P GQ
Sbjct: 75  QL---YGFYFGLNLLLGIRIERT-------MAAVVAFSLNYAAYFAEIYRSGIQAIPNGQ 124

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA  LG    +    ++LPQ ++ I+PP+ S+ + L+K++SLA  +G  ++  V    
Sbjct: 125 YEAAKVLGFGKAQTFFKIILPQVVKIILPPMGSECMTLVKDTSLAHVIGVMEIYVVAANN 184

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++++ + +E +++    YL ++++++     L  +++   
Sbjct: 185 MSRS-RGMEYLIVAGIFYLIMNMIVSKVFGILEKRMSYYR 223


>gi|213966879|ref|ZP_03395029.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301381562|ref|ZP_07229980.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302061682|ref|ZP_07253223.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302131521|ref|ZP_07257511.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213928201|gb|EEB61746.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 246

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIIRGAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVEQRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|153827815|ref|ZP_01980482.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|148876660|gb|EDL74795.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
          Length = 266

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYTWQWHRVPEYVLIFEDGQWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSHSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFSALQMILVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGQ 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSHSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|283786381|ref|YP_003366246.1| histidine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282949835|emb|CBG89458.1| histidine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 235

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++F   + R    K  +    +++ T++  G P
Sbjct: 14  WSDGYRFTGVAITLWLLISSVVMGGILAVFL-AIGRVSSNKFIQF--PIWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   + +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLMISYVLISLFRRAERR 227


>gi|119383469|ref|YP_914525.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373236|gb|ABL68829.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 215

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 14/215 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                    I      LG+V+       +R       +    +++S   + G+P LV + 
Sbjct: 15  FWAARYTLLISGLGIALGLVIGTLVCA-ARLSPYAPLRGFAAIWVSF--LRGVPLLVQLL 71

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + Y                     P   +  + +    +A+I+EI R  + A+PRGQ EA
Sbjct: 72  VFYY-----------TLPVIGIDVPAIFAAVVTVGICASAYISEIWRGAIAALPRGQAEA 120

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+A+G+T R     V+LPQA    +P L ++ + L+K SSL   VG  +L          
Sbjct: 121 AVAIGMTPRDTWTRVILPQAFTMSLPALVNELILLVKASSLVSVVGILELTRASQAQAAT 180

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           T + +E+ L    IYL++++ +A     L  + A+
Sbjct: 181 TFRPLEVYLAAACIYLAINLCLAALGRYLEHRTAV 215



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 32/93 (34%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++  G+    +IGTLV A RLS    +     ++V   R +P LV +   Y ++  +
Sbjct: 21  TLLISGLGIALGLVIGTLVCAARLSPYAPLRGFAAIWVSFLRGVPLLVQLLVFYYTLPVI 80

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                        + +               A 
Sbjct: 81  GIDVPAIFAAVVTVGICASAYISEIWRGAIAAL 113


>gi|254381563|ref|ZP_04996927.1| polar amino acid ABC transporter [Streptomyces sp. Mg1]
 gi|194340472|gb|EDX21438.1| polar amino acid ABC transporter [Streptomyces sp. Mg1]
          Length = 314

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R++R    +  +    +Y+  F       LV +     + F  P L     + G+   P 
Sbjct: 129 RVTRAPGLQPLRLAATVYVDVFRGVPTLLLVFL-----VGFGLPALR----LQGTPSQP- 178

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++   IAL    AA++ E++R+GL +V   Q  AA ALGL  R+  R V+LPQA+R+++P
Sbjct: 179 WVLGVIALVLSYAAYVGEVLRAGLNSVHPAQRNAARALGLGERQTLRYVVLPQAVRNVLP 238

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL + ++ L K+++L   +G  + +       +         L    ++++++I +  F 
Sbjct: 239 PLLNDFIALQKDTALVAVLGPLEALRAAQIKADYDFNYTP-YLGAALLFIAVTIPLTRFA 297

Query: 386 NRLNAKIALK 395
           +RL  + A +
Sbjct: 298 DRLQRRAAQR 307


>gi|153801933|ref|ZP_01956519.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|124122508|gb|EAY41251.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
          Length = 266

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYTWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSHSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFAALQMMLVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGE 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSHSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|325062522|gb|ADY66212.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 219

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L+      + + SF+ G ++ +    L R    +       +YI  F  
Sbjct: 4   FTFWDILRNLLLSTRWTLLLSLVSFIGGGMVGIVLLWL-RISPRRAVNRAARIYIEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F         P +++  +AL  +TAAF+AEI R  +
Sbjct: 61  QGTPLLMQLFIAF-----------FGLGLLGVDVPAWLAAGVALILWTAAFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+ +GQ EA+ +L +   +  R V+LPQA++  IPP     + ++K ++L   +GF +L
Sbjct: 110 EAIAKGQWEASASLAMGRLQQMRYVILPQALKIAIPPTVGFSVQVVKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 170 SKAGTIVTNATFQPFTVYGLVALIYFALCWPLSKSSQFLERKLNVAHR 217



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 37/107 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    I   ++G ++   R+S  + V    R+Y+EVF+  P L
Sbjct: 7   WDILRNLLLSTRWTLLLSLVSFIGGGMVGIVLLWLRISPRRAVNRAARIYIEVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F  +  +  +       +     + L               A  
Sbjct: 67  MQLFIAFFGLGLLGVDVPAWLAAGVALILWTAAFLAEIWRGCVEAIA 113


>gi|304394878|ref|ZP_07376762.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357131|gb|EFM21494.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 228

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 91/180 (50%), Gaps = 4/180 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +TG      Y+  F   G P L+ I + Y      P +    F     +   +    +AL
Sbjct: 45  RTGSFFCRFYVWLF--RGTPLLIQIFMVYYGLGSLPAVRDSLF--WPLLRDPYWCGLLAL 100

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
               AA+ +EI+R GL AV +  +EAA   G++  K    + LP A+R  +P  +++ ++
Sbjct: 101 ILNDAAYTSEILRGGLRAVSQQSLEAAKVSGMSSYKIFTRITLPIAIRQALPAYSNEIIS 160

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++K +SL   +   ++  +  +I++ T +A+E+ L    IYL L+++++  ++ L  +++
Sbjct: 161 MIKATSLVSTISLMEMTGIADSIVSSTFRALEVFLSAAVIYLILTMLVSKGVSMLERRLS 220


>gi|261247558|emb|CBG25385.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
          Length = 235

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 96/223 (43%), Gaps = 8/223 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++ +    +   +T+       V   +L ++L++     ++             ++ T++
Sbjct: 13  LWTDGYRFTGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIRFPI-------WLFTYI 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI    
Sbjct: 66  FRGTPLYVQLLVFYSGMYTLEIVKGTDLL-NTFFRSGLNCTVLALTLNTCAYTTEIFAGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      D
Sbjct: 125 IRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+ +   I + T Q      I   +YL +S ++     R   +
Sbjct: 185 LLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERR 227


>gi|218674961|ref|ZP_03524630.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli GR56]
          Length = 219

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L       + + SF+ G  + L    L R    K  +     YI  F  
Sbjct: 4   FTLWDILRNLLLATRWTILLSLVSFIGGGAVGLVLLFL-RISKNKAFRIFAKYYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F         P +++  +AL  +TAAF+AEI R  +
Sbjct: 61  QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLAAGLALILWTAAFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V RGQ EA+ +L +   +  R V+LPQA+R  IPP     + ++K ++L   +GF +L
Sbjct: 110 ESVARGQWEASASLAMGRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 170 SKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 217



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 34/107 (31%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    I    +G ++   R+S NK      + Y+E+F+  P L
Sbjct: 7   WDILRNLLLATRWTILLSLVSFIGGGAVGLVLLFLRISKNKAFRIFAKYYIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F  +  +          +     + L               +  
Sbjct: 67  MQLFIAFFGLGLFGIDVPAWLAAGLALILWTAAFLAEIWRGCVESVA 113


>gi|121609555|ref|YP_997362.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554195|gb|ABM58344.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 216

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 18/230 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  FG       L+    T+  +   FV   ++G+VL+L     +R       + L   
Sbjct: 1   MIRDFGSVEFLYLLAAMRWTLGLSVLAFVCGGIVGLVLAL-----ARVAPVAPLRWLAAG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F    L  L+ +       FD                  F+S+ IAL+CY +A+  
Sbjct: 56  YIQLFQATPLLMLLFLVFFGLALFDL-------------GQSAFLSVTIALTCYASAYFG 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + +VP+ Q + + ALG ++ +  R V+LPQ++R   PP     + L+KN+SLA 
Sbjct: 103 EIWRGSIQSVPQTQWQGSAALGFSYLEQMRHVVLPQSVRIATPPTVGFMVQLVKNTSLAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G  +L      + N T + I +  +   +Y ++   + +   RL  K 
Sbjct: 163 IIGMHELAHAAQYVNNVTLRPILVYGVVGAMYFAVCWPLYMLSRRLEKKF 212



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +L     T  L+    +   I+G ++   R++    + W+   Y+++F+  P
Sbjct: 12  YLLAAMRWTLGLSVLAFVCGGIVGLVLALARVAPVAPLRWLAAGYIQLFQATP 64


>gi|90578889|ref|ZP_01234699.1| putative ABC-type amino acid transport system, permease component
           [Vibrio angustum S14]
 gi|90439722|gb|EAS64903.1| putative ABC-type amino acid transport system, permease component
           [Vibrio angustum S14]
          Length = 365

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 121/266 (45%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  L      Y+  + +  +  +  +  F ++    GL+     +     I +   ++GI
Sbjct: 110 IGLLAYEKTPYRGWIWLFFVNIYPFIAGFLLYGGVFGLTIVETHLWGGLLITLIIAIVGI 169

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           V+SL       L R       +++  +YI  +    L T++ +A           +    
Sbjct: 170 VVSLPIGVVLALGRRSEMPIIRSICTVYIELWRGVPLITVLFMA----------SVMLPL 219

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+     + + +   + +  ++AA++AE++R GL A+P+GQ EAA ALGLT+ K   L++
Sbjct: 220 FLSSEMETNKLIRALMGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLTYWKKMYLIV 279

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    
Sbjct: 280 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAATTDPEWLGFATESYVFVAL 339

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  K+    K+
Sbjct: 340 VFWIFCFGMSRYSIYLENKLHTGHKR 365


>gi|295100980|emb|CBK98525.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC
           transporter membrane protein [Faecalibacterium
           prausnitzii L2-6]
          Length = 246

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 103/231 (44%), Gaps = 23/231 (9%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+ T       +F++G  L L +         K  + +  +Y+  F+  
Sbjct: 16  HRESFLLGLGNTLQTAVCALALAFIIGAALGLMS-----TSGSKLLRIIARIYVE-FVQN 69

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L L  L Y L F    LG               +  IAL  YT A++ E+VR+ + 
Sbjct: 70  TPLLLQLCFLYYALAFAGVSLGVI------------RTGIIALGVYTGAYMGEVVRAAIE 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ EAA A G  + +    ++LPQ++  ++PP+ +Q +NL KN+S    VG ADL+
Sbjct: 118 SVPKGQFEAAQAQGFNYLQRMGYIILPQSIPVMLPPMVNQVVNLFKNTSCLYIVGGADLI 177

Query: 351 SVGGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SV  +     +  G      ++   I+  +   ++    R  A  +LKE+K
Sbjct: 178 SVTYSFVTGASTGGAYAPAYIVCGLIFFVVCFPLSTLAARWEA--SLKERK 226



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 42/78 (53%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +++  ++  + L+G  NT   A   +  A IIG  +G    S +KL+  I R+YVE
Sbjct: 6   SLESWSTVWTHRESFLLGLGNTLQTAVCALALAFIIGAALGLMSTSGSKLLRIIARIYVE 65

Query: 135 VFRNIPPLVVIFFLYKSV 152
             +N P L+ + FLY ++
Sbjct: 66  FVQNTPLLLQLCFLYYAL 83


>gi|323155720|gb|EFZ41890.1| glutamine transport system permease glnP domain protein
           [Escherichia coli EPECa14]
          Length = 132

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 79/130 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++
Sbjct: 2   PFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRML 61

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  +K++SL + +G A+L   G  II    +A+EI      +YL ++++++  
Sbjct: 62  PPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVLYLIITLVLSFI 121

Query: 385 MNRLNAKIAL 394
           + RL  ++ +
Sbjct: 122 LRRLERRMKI 131


>gi|323525627|ref|YP_004227780.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382629|gb|ADX54720.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 246

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +AL   Y  T LI  +P LVL+ L +                       F++
Sbjct: 56  KLSLNRPLRALATGY--TTLIRSVPDLVLMLLLFYSIQIAVNNLTDALDLPQFDIDPFVA 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + 
Sbjct: 114 GVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFARILFPQMMRFALPGIG 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T      ILI   IYL+L+ +  L +  L
Sbjct: 174 NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLALTTVSNLALIWL 233

Query: 389 NAKIALKEKK 398
             + ++  + 
Sbjct: 234 ERRYSIGVRH 243


>gi|317048137|ref|YP_004115785.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949754|gb|ADU69229.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 249

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 93/233 (39%), Gaps = 18/233 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            S    F    N         T+           VLGI+L+      +R         + 
Sbjct: 5   WSWEGYFHYLTNYFIFMGAVNTVLLTLAGMAGGLVLGILLAF-----ARLSPWSWINQIA 59

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI  F   G P LV + + Y                         ++ + L    AA+
Sbjct: 60  RAYIWVF--RGTPLLVQLIIIYT-----------GLPQIGIRFTVIEAVVMGLVLNEAAY 106

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R G+ A+P+GQ+ AA ALG  H    R V+ PQ MR I+P L + +  LLK +S+
Sbjct: 107 LAEIIRGGVQALPKGQINAAKALGFNHLNVARYVIFPQTMRLILPSLGNSFNGLLKTTSI 166

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +L+     ++ +    +E+ ++    YL L+ +      ++    A
Sbjct: 167 ASVISVEELLRRTQILMQEQFMVLELFMVAATYYLLLTTLWDFIQRKIERHYA 219



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 41/100 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +G VNT  L  +GM    ++G L+   RLS    +  I R Y+ VFR  P LV +  +
Sbjct: 19  IFMGAVNTVLLTLAGMAGGLVLGILLAFARLSPWSWINQIARAYIWVFRGTPLLVQLIII 78

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +  +         +  G+ LN        +     A 
Sbjct: 79  YTGLPQIGIRFTVIEAVVMGLVLNEAAYLAEIIRGGVQAL 118


>gi|153010784|ref|YP_001371998.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562672|gb|ABS16169.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Ochrobactrum anthropi ATCC 49188]
          Length = 230

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 18/204 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  F  + VLG+V +L      +     T        +    +   P LV +   Y +  
Sbjct: 35  ATGFAIALVLGLVFALLRRSPYKIISWPT-------VVVVEFLRDTPLLVQLFFLYYV-- 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V P F++  +AL    +A+ +E+ R G+ A+PRGQ EAA AL LT
Sbjct: 86  ---------LPAYGIVLPAFLTGALALGLQYSAYTSEVYRGGIEAIPRGQWEAARALNLT 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +++PQA+  IIP + +  +++LK + +   V   D++++   I ++T + +  
Sbjct: 137 PWRTYRDIVIPQAIPRIIPAMGNYLVSMLKETPVLSVVSIVDMLNLANLIGDRTFEYLVP 196

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
           + +   I+L L+++ +  +  L  
Sbjct: 197 LSMVGLIFLILTLICSALIRLLER 220



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 35/74 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    + +G   T   A +G   A ++G +    R S  K+++W   V VE  R+ P LV
Sbjct: 18  SILPILGIGLTVTLKAAATGFAIALVLGLVFALLRRSPYKIISWPTVVVVEFLRDTPLLV 77

Query: 144 VIFFLYKSVLSVLP 157
            +FFLY  + +   
Sbjct: 78  QLFFLYYVLPAYGI 91


>gi|28868468|ref|NP_791087.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213967084|ref|ZP_03395233.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301386370|ref|ZP_07234788.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302062366|ref|ZP_07253907.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302133058|ref|ZP_07259048.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28851706|gb|AAO54782.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213927926|gb|EEB61472.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331015250|gb|EGH95306.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 365

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + +V  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFPRKAVYGICFLLIYPVVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + +A  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRAMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLEHKLDTGHKR 365



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   ++ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRAMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|310766723|gb|ADP11673.1| Putative amino acid ABC transporter, permease protein [Erwinia sp.
           Ejp617]
          Length = 218

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L    L       + V +F  G +++L   RL R         +   Y+  F  
Sbjct: 4   FTDWDILRNLLLAARWTMALSVTAFFGGTLVALPLVRL-RLAGRLWPNRIIRAYVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+CYT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGIDLSPWTAAALALTCYTSAFLVDIWYGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA   LGL+  +    V+LPQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 RALPKGQWEACRCLGLSTGQTLFRVVLPQALRIAIAPTVGFAVQVVKGTALASIIGFIEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 170 TKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSCYSQYLEKKF 212



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 32/107 (29%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +     T++   +   RL+       I R YVE+F+  P 
Sbjct: 6   DWDILRNLLLAARWTMALSVTAFFGGTLVALPLVRLRLAGRLWPNRIIRAYVELFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  V                +                 A 
Sbjct: 66  LMQLFLAFFGVALFGIDLSPWTAAALALTCYTSAFLVDIWYGSIRAL 112


>gi|239834033|ref|ZP_04682361.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822096|gb|EEQ93665.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 218

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 18/236 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++ PFG       +     T+  +A  FV   + G++++L      R    +  + + L 
Sbjct: 1   MIRPFGWNEFLIIVYAAQWTIALSAIAFVGGGIGGLLVALM-----RVSDARVPRFIALG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I  F   G P L+ + L +           F           +++  IAL+ + +AF+ 
Sbjct: 56  FIRLF--QGTPLLMQLFLVF-----------FGLNIFGLGINPWIAATIALTLHASAFLG 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + AVP GQ EAA ALGL +    R V+LPQA R  + P     + L+K +SLA 
Sbjct: 103 EIWRGCIDAVPPGQREAATALGLRYYNRMRYVILPQAARISVAPTVGFLVQLIKGTSLAA 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +GF +L   G  I N T     +      IY  L   +++   R+ A+ +    +
Sbjct: 163 IIGFTELTRQGQIINNATFSPFMVFGTVAAIYFVLCWPLSILARRMEARFSRATAR 218


>gi|227529453|ref|ZP_03959502.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Lactobacillus vaginalis
           ATCC 49540]
 gi|227350538|gb|EEJ40829.1| amino acid ABC superfamily ATP binding cassette transporter, amino
           acid-binding/permease protein [Lactobacillus vaginalis
           ATCC 49540]
          Length = 204

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 10/169 (5%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I   P LV I   Y ++   P L  F+         +F++  +AL+ Y+ A+IAEI
Sbjct: 43  YIGFIRNTPLLVQI---YIVYIGLPQLLGFSV-------NDFVTGIVALTLYSGAYIAEI 92

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ ++P GQ EAA +LG+   +    ++LPQA ++I+P L +Q +  +K+SSL   +
Sbjct: 93  IRSGIQSLPVGQTEAAESLGIPSYRILLNIILPQAFKNILPALGNQLIGNVKDSSLVSVL 152

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  D++    T+   T   +E ++I   +YL + +++   +     ++ 
Sbjct: 153 GITDIMFAAQTVRGSTALGLEPMIIASALYLVICLILNQILALFERRMR 201



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 35/73 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  LA   ++   ++G  +   ++S   L++ I + Y+   RN P LV I+ +Y  
Sbjct: 3   GLVTTIELAVISIVLGLLLGIALAVMKMSKANLLSLIAKTYIGFIRNTPLLVQIYIVYIG 62

Query: 152 VLSVLPIPDHSIV 164
           +  +L    +  V
Sbjct: 63  LPQLLGFSVNDFV 75


>gi|227893086|ref|ZP_04010891.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus ultunensis DSM 16047]
 gi|227865064|gb|EEJ72485.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus ultunensis DSM 16047]
          Length = 217

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFV+G++L L      ++     G    
Sbjct: 2   ETFIHAYSWVDIRFLLQGLWVTIYVSLISIALSFVVGLILGLIRYMKIKYVSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+    +   AL  +  A 
Sbjct: 58  ------FIIDIIRNLPLLLIIFFTYFGLPQL--------GIVTNPTTASIAALVIFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ +V  GQME A + G+++ +A   V++PQA+ ++IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIGSVDPGQMEGARSNGMSYGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   ++   N L  K 
Sbjct: 164 ATIIVLPELLYHAQIIYSQNTTYLIPMYVIIAIMYFIVCFCLSQVANYLEKKY 216



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 36/71 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R    K V+ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLIRYMKIKYVSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|313808161|gb|EFS46635.1| conserved hypothetical protein [Propionibacterium acnes HL087PA2]
 gi|313818928|gb|EFS56642.1| conserved hypothetical protein [Propionibacterium acnes HL046PA2]
 gi|313820757|gb|EFS58471.1| conserved hypothetical protein [Propionibacterium acnes HL036PA1]
 gi|313822478|gb|EFS60192.1| conserved hypothetical protein [Propionibacterium acnes HL036PA2]
 gi|313825726|gb|EFS63440.1| conserved hypothetical protein [Propionibacterium acnes HL063PA1]
 gi|314925672|gb|EFS89503.1| conserved hypothetical protein [Propionibacterium acnes HL036PA3]
 gi|314959775|gb|EFT03877.1| conserved hypothetical protein [Propionibacterium acnes HL002PA2]
 gi|314986713|gb|EFT30805.1| conserved hypothetical protein [Propionibacterium acnes HL005PA2]
 gi|314989456|gb|EFT33547.1| conserved hypothetical protein [Propionibacterium acnes HL005PA3]
 gi|315084061|gb|EFT56037.1| conserved hypothetical protein [Propionibacterium acnes HL027PA2]
 gi|315085263|gb|EFT57239.1| conserved hypothetical protein [Propionibacterium acnes HL002PA3]
 gi|327330517|gb|EGE72264.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Propionibacterium acnes HL096PA3]
 gi|327446854|gb|EGE93508.1| hypothetical protein HMPREF9568_00811 [Propionibacterium acnes
           HL013PA2]
 gi|328752530|gb|EGF66146.1| hypothetical protein HMPREF9563_02260 [Propionibacterium acnes
           HL020PA1]
          Length = 182

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 1/144 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +          +  I L     A++AEI RSGL +V  GQ EAA ALG+      R
Sbjct: 7   QFASVETEKAVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIMR 66

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
             ++PQAMR IIPP  ++ + +LK +SL +A+ F  DL      I N T   I ++++  
Sbjct: 67  RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
             YL ++ ++ +  + L       
Sbjct: 127 CWYLVMTSVLMIGQHFLEQYFGRG 150


>gi|227833322|ref|YP_002835029.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184306|ref|ZP_06043727.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454338|gb|ACP33091.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 312

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 15/268 (5%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +Y  +   +   V+ + L                           L     T+ + A   
Sbjct: 22  IYTIITAVLSVAVLYWVLSTLGERGQLDSALWTPFLNNQTWTTYLLPGLRGTILSAAASI 81

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + V GI+  L      R       + L  + +  F    +P L+L+   YQL     V
Sbjct: 82  VLAIVFGIIFGL-----GRLSENVFVRGLCGVVVEFF--RAIPVLLLMIFAYQLFAIYDV 134

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +         +    F ++  AL+ Y  + +AEI+RSG+ ++P+GQ EAA ALGL+H + 
Sbjct: 135 VP--------SKQLAFSAVVFALTLYNGSVVAEILRSGIKSLPKGQTEAARALGLSHGQT 186

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R +LLPQA+ +++P L +Q +  LK+S+L   +G+ ++V  G    +     +  +++ 
Sbjct: 187 MRTILLPQAVAAMLPALIAQMVIALKDSALGYQIGYVEVVRSGIQSASYNKNYLASLIVV 246

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             I + ++  + L   R+ A++     +
Sbjct: 247 AIIMILINWGLGLLAERIEAQLRAGRAR 274



 Score = 80.0 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      +  N+   II A+L   +  W ++                 L ER  
Sbjct: 4   RATVLYDAPGPKGKRRNLIYTIITAVLSVAVLYWVLST----------------LGERGQ 47

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
            +      P+ ++ ++ T +L G   T   A + ++ A + G + G GRLS N  V  +C
Sbjct: 48  LDSAL-WTPFLNNQTWTTYLLPGLRGTILSAAASIVLAIVFGIIFGLGRLSENVFVRGLC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            V VE FR IP L+++ F Y+       +P   +     +F
Sbjct: 107 GVVVEFFRAIPVLLLMIFAYQLFAIYDVVPSKQLAFSAVVF 147


>gi|121607337|ref|YP_995144.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121551977|gb|ABM56126.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 234

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 94/230 (40%), Gaps = 10/230 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                          ++   S +  I L L +   ++    +   A+   Y  T L+ G+
Sbjct: 1   MEYFWNVLAAASVTLEMAAGSLLAAIALGL-SGAWAKLCGGRWLAAVAGAY--TTLVRGV 57

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFI----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           P LVL+ L +   +  P L Q                  +    L      ++ E  R  
Sbjct: 58  PDLVLMLLFF---YGVPALVQLALDKSGSDAGFDVSPLGAGLATLGLIFGGYLTETFRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++A+P+GQ+EAA A GL   +    ++LPQ  R  +P  T+ +L L+K+++L   +G  D
Sbjct: 115 ILAIPKGQIEAACAFGLGRLRIAWRIVLPQMARLALPGFTNTWLVLVKSTALVSVLGLED 174

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++         T Q     L+   +YLS++ +  L +  L  + A   ++
Sbjct: 175 IMFRAKNAAQATRQPFTFFLLTAAVYLSITTVSMLALRWLERRGAHDTRR 224


>gi|108563347|ref|YP_627663.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           HPAG1]
 gi|107837120|gb|ABF84989.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           HPAG1]
          Length = 237

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 41  PLAIISFILGLFIAVMVALIKIAPPKHFMHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +    +  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKHVEK 234


>gi|78062809|ref|YP_372717.1| glutamine ABC transporter permease protein [Burkholderia sp. 383]
 gi|77970694|gb|ABB12073.1| L-glutamine ABC transporter membrane protein [Burkholderia sp. 383]
          Length = 218

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I  F  V G ++ + A  + R +  K    L  +YI
Sbjct: 1   MNFDWSAIWAALPDLMDGVRLTVFIAFFGLVGGFIVGMIAG-MFRAYGPKAMNVLAQVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +     L+F  P+L      G         +  IA++  + A++AE+
Sbjct: 60  E--LIRGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIIAITVNSGAYLAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++P+G  EA +A+GL+  +    V+ P A R +IPPL +Q +  LK++SL + +
Sbjct: 108 VRGALLSIPKGLTEAGLAMGLSMPRVLLKVVGPLAFRRLIPPLGNQCIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  II    QA+EI      IYL L+  + L +  +  ++ +
Sbjct: 168 GVGELTRKGQEIIAGNFQAVEIWTAVAVIYLLLTGAMTLTLRLVEKRMRI 217


>gi|83746154|ref|ZP_00943208.1| Hypothetical Protein RRSL_04190 [Ralstonia solanacearum UW551]
 gi|207722043|ref|YP_002252481.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207741843|ref|YP_002258235.1| amino-acid transmembrane abc transporter protein [Ralstonia
           solanacearum IPO1609]
 gi|83727120|gb|EAP74244.1| Hypothetical Protein RRSL_04190 [Ralstonia solanacearum UW551]
 gi|206587217|emb|CAQ17801.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206593227|emb|CAQ60154.1| amino-acid transmembrane abc transporter protein [Ralstonia
           solanacearum IPO1609]
          Length = 223

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 14/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +      L           ++ V SF+L  V+ L    L R    K   A     ++  
Sbjct: 6   FLEHAREFLPILLQGAVVTVEVTVLSFLLSSVIGLAL-ALMRLSPVKAVSAAGATVVN-- 62

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP +V +   Y           F           F +  I L    +A+ AE  R+
Sbjct: 63  IIRGLPIIVQLFYIY-----------FVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AV  GQ EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A
Sbjct: 112 GIEAVDPGQREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVA 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++   G  I + T Q + +  +   +YL +S+ +   + RL   +    
Sbjct: 172 EMTRAGQLIASSTFQNMTVYTLVALLYLLMSLPLVFGLRRLERAMGAGR 220



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 37/99 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +     + +++IG  +   RLS  K V+      V + R +P +V +F++
Sbjct: 17  LLQGAVVTVEVTVLSFLLSSVIGLALALMRLSPVKAVSAAGATVVNIIRGLPIIVQLFYI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +            G+ +               A
Sbjct: 77  YFVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEA 115


>gi|307547047|ref|YP_003899526.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307219071|emb|CBV44341.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 223

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 12/183 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       +     YI  F   G P LV +   +   +  P L               ++
Sbjct: 48  RISPTIWLRIPAAAYIEVF--RGTPVLVQVLFIF---YGLPQLLGGPI-------NALVA 95

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              A++  + A+I+EIVR G+ ++ RGQ EA ++LGL+  +  R ++ PQA R +IPPL 
Sbjct: 96  GIAAIAVNSGAYISEIVRGGVQSIERGQKEAGLSLGLSRVQTFRYIIWPQAFRRMIPPLG 155

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q +  +K++SL   +G  +LV  G   I  T  A+E+ L+   +YL++++ ++L +  L
Sbjct: 156 NQGIISIKDTSLFSVIGVGELVRQGQIYIATTFTALEVYLMVAMLYLAITLTLSLALRLL 215

Query: 389 NAK 391
             K
Sbjct: 216 ERK 218



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 38/76 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F G+    IIG + G  R+S    +      Y+EVFR  P LV + F+
Sbjct: 19  LAAGIPYTLLISFGGLAIGFIIGIIFGLLRISPTIWLRIPAAAYIEVFRGTPVLVQVLFI 78

Query: 149 YKSVLSVLPIPDHSIV 164
           +  +  +L  P +++V
Sbjct: 79  FYGLPQLLGGPINALV 94


>gi|293397298|ref|ZP_06641570.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
 gi|291420216|gb|EFE93473.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Serratia odorifera DSM
           4582]
          Length = 224

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI V + V GIV       + R    K       LY
Sbjct: 1   MYEFDWGSIVPSLPYLMQGMIVTLKITVTAVVFGIVWGTIL-AVMRLSPLKPISWFATLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSLLQQVLGISPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSVSRGQSSAALALGMTHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      +I  + G  +E+IL   F+Y  +SI  +  ++ L  +
Sbjct: 175 LSLADFFRTASSIGERDGTQVEMILFAGFVYFVISIAASALVSYLKKR 222



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 39/68 (57%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G + T  +  + ++   + GT++   RLS  K ++W   +YV +FR++P ++V+ +
Sbjct: 15  YLMQGMIVTLKITVTAVVFGIVWGTILAVMRLSPLKPISWFATLYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVLSV 155
            Y  V S+
Sbjct: 75  FYLVVPSL 82


>gi|242239815|ref|YP_002987996.1| glutamine ABC transporter permease [Dickeya dadantii Ech703]
 gi|242131872|gb|ACS86174.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 219

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 99/188 (52%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P ++ I     ++F  P+      +  S      
Sbjct: 42  FARVYGGWLSNRIALVFIE--IIRGTPMVIQIM---YIYFAIPM------VLTSVRIDPV 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  I +   + A+IAEI R  ++++ +G  EA +ALGL+HR   R V+ P A+R ++PP
Sbjct: 91  TAAIITIMINSGAYIAEITRGAVMSIHKGFTEAGLALGLSHRATLRHVITPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G ++L      II    +A+EI+     IYL +++++ + M 
Sbjct: 151 LGNQWIISIKDTSLCIVIGVSELTRQAQEIIAGNFRALEILTATAIIYLVITLILTIGMR 210

Query: 387 RLNAKIAL 394
            L  K+ +
Sbjct: 211 WLERKLKI 218


>gi|134280169|ref|ZP_01766880.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 305]
 gi|134248176|gb|EBA48259.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 305]
          Length = 246

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++V+ +V+      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLVAWVIALVVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    PV            +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVVPELLPVSIGTWIKQMPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + +K
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFMRWVESK 236



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 47/98 (47%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A ++G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLVAWVIALVVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            VYV +FRNIP +V  F  Y  V  +LP+   + +   
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVVPELLPVSIGTWIKQM 104


>gi|15601990|ref|NP_245062.1| arginine transporter permease subunit ArtQ [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|12720338|gb|AAK02209.1| ArtQ [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 223

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    LS           + V S ++G++LS+    L     +   K      +   L+ 
Sbjct: 1   MFFDYLSLMYTATLMTLGLAVCSLIVGLILSIIFVVLETSKWQWIRKPTS---VFVTLLR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +   +    FI  S     F     ALS   AA+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIYFGSTEVVEMLTGEFIQFS----AFSCGVFALSIIFAAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AIPLGQWESGAALGLSRGYTFVQIIMPQVWRHALPGLSNQWLVLLKDTALVSLIGVEDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +   T Q      I   +YL+++++    + +L  +    E+
Sbjct: 174 RQAELVNTVTHQPFTWYGIAALLYLTITLISQFIIRKLEFRFTRFER 220


>gi|220905024|ref|YP_002480336.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869323|gb|ACL49658.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 222

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 105/230 (45%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +    F ++  +      +  +  + + +  LG V  +     +R F  +  + L   + 
Sbjct: 1   MLDTAFFSHELIPALNKGLLVSLALIIPAGSLGFVGGVLLGC-ARAFGPRWMRRLGDWF- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T ++ G+P LV + + Y   +  P LG +         P + +   +    TAA+ +E 
Sbjct: 59  -TAIVRGVPLLVQLMMIY---YALPKLGIYF--------PPYGAALTSFILCTAAYQSEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++ +GQ+ AA ALG +  K    +++PQA R  +P   ++ + L+K SSLA  V
Sbjct: 107 VRGALLSIRQGQIRAAQALGFSTWKTVAWIVVPQAARRALPGCGNEIIYLIKYSSLAYFV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +L+  G  + + T +  E+ +     YL++  +   F+  L  +  +
Sbjct: 167 TCMELMGEGKVVASDTFRFTEVFITVGAYYLAMVTLATFFLRWLERRFHV 216



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 28/70 (40%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G + +  L         + G L+G  R    + +  +   +  + R +P LV +  
Sbjct: 14  ALNKGLLVSLALIIPAGSLGFVGGVLLGCARAFGPRWMRRLGDWFTAIVRGVPLLVQLMM 73

Query: 148 LYKSVLSVLP 157
           +Y ++  +  
Sbjct: 74  IYYALPKLGI 83


>gi|77460758|ref|YP_350265.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77384761|gb|ABA76274.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 223

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+   A   V   +LG +L+L      R  H K   ++   Y++ F      ++
Sbjct: 16  WNGMLMTLKLMALGVVGGIILGTLLALM-----RLSHSKLLSSIAGAYVNYFR-----SI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++P+G
Sbjct: 66  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFTSCIVAFMMFEAAYFCEIVRAGVQSIPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+T+ +  RL++LPQA R + P L  Q + L +++SL   VG  D ++    
Sbjct: 125 QMGAAQALGMTYGQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRA 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G++ E ++    +Y ++S   ++ + RL  + A+
Sbjct: 185 SGDIIGRSNEFLIFAGLVYFTISFAASVLVKRLQKRFAV 223



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L   G++   I+GTL+   RLS +KL++ I   YV  FR+IP L+VI + 
Sbjct: 15  LWNGMLMTLKLMALGVVGGIILGTLLALMRLSHSKLLSSIAGAYVNYFRSIPLLLVITWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 75  YLAVPFVLRWITGEDTPIGAFTSCIVAFMMFEAAYFCEI 113


>gi|56420514|ref|YP_147832.1| glutamine ABC transporter permease [Geobacillus kaustophilus
           HTA426]
 gi|56380356|dbj|BAD76264.1| glutamine ABC transporter (permease) [Geobacillus kaustophilus
           HTA426]
          Length = 216

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SFV GI++ +         + K      LL +    I  LP L
Sbjct: 16  LQGFLVTLEVAFISIVLSFVFGIIIGVI-------RYTKIPVLSQLLAVLVETIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F          +  +   AL  + +A ++EIVRSGL ++ +G
Sbjct: 69  LIIFFTY-----------FALPEVGLKLDKMYAAISALVIFESAMLSEIVRSGLQSIDKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +    ++LPQA+R ++PP+ SQ+++LLK++SLA+ +   +L++    
Sbjct: 118 QIEAARSSGLTYMQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMNHAQI 177

Query: 356 IINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  +     I I ++  F+Y  ++  ++L   RL  +
Sbjct: 178 INGRNVNFVIPIFILVAFMYFIVNYSLSLLSRRLEYR 214



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 41/71 (57%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L GF+ T  +AF  ++ + + G ++G  R +   +++ +  V VE  RN+P L++
Sbjct: 11  HLKFLLQGFLVTLEVAFISIVLSFVFGIIIGVIRYTKIPVLSQLLAVLVETIRNLPLLLI 70

Query: 145 IFFLYKSVLSV 155
           IFF Y ++  V
Sbjct: 71  IFFTYFALPEV 81


>gi|46199112|ref|YP_004779.1| amino acid ABC transporter, permease protein [Thermus thermophilus
           HB27]
 gi|55981139|ref|YP_144436.1| amino acid ABC transporter permease [Thermus thermophilus HB8]
 gi|46196736|gb|AAS81152.1| amino acid ABC transporter, permease protein [Thermus thermophilus
           HB27]
 gi|55772552|dbj|BAD70993.1| amino acid ABC transporter, permease protein [Thermus thermophilus
           HB8]
          Length = 261

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 6/213 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+ + S   G+V+ +FA  ++R       +     YI  ++I G P LV I   Y  
Sbjct: 55  VTLKLTLLSGAAGLVIGVFAG-MARLSARAWVRLPAAFYI--WVIRGTPLLVQILFAYN- 110

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P+L Q  + G       + + +IAL+    A+ AE+VR+G+ A+P+GQ EAA +LG
Sbjct: 111 --ALPLLLQPLWPGAQQALTPYWAAFIALAFNVGAYNAEVVRAGIQAIPKGQWEAAWSLG 168

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +     R V+LPQA+R ++PPL +  + LLK+SSLA  +   +L   G  II+ T + +
Sbjct: 169 FSAADTMRFVILPQALRIVVPPLVNNVVALLKDSSLASVITLLELALSGQRIISATFRPV 228

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           E+ L    +YL L+ ++  F N L  ++AL  +
Sbjct: 229 EVYLAVAAVYLLLTTLLTFFTNLLERRLALPGR 261



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 28/86 (32%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T  L         +IG   G  RLSA   V      Y+ V R  P LV I
Sbjct: 46  GRIMAQGAEVTLKLTLLSGAAGLVIGVFAGMARLSARAWVRLPAAFYIWVIRGTPLLVQI 105

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL 171
            F Y ++  +L             + 
Sbjct: 106 LFAYNALPLLLQPLWPGAQQALTPYW 131


>gi|26991170|ref|NP_746595.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148546671|ref|YP_001266773.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24986215|gb|AAN70059.1|AE016645_5 basic amino acid ABC transporter, permease protein [Pseudomonas
           putida KT2440]
 gi|148510729|gb|ABQ77589.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 232

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 13/223 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      + T  K+   S   G++ ++    L R   +        LY  T++I G 
Sbjct: 9   WEALPMYFGGLLTTLKLLAISLFFGLLAAIPLG-LMRVSRQPVVNLAAWLY--TYVIRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF  +  S   P          +A    T+A+ AEI+   
Sbjct: 66  PMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGS 119

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +SLA  V   D
Sbjct: 120 LKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLID 179

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +     T+  Q     E  +     YL L+ ++         +
Sbjct: 180 ITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAERR 222


>gi|229528071|ref|ZP_04417462.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229334433|gb|EEN99918.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
          Length = 266

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYTWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSHSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFAALQMILVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGE 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSHSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|242240068|ref|YP_002988249.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132125|gb|ACS86427.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 239

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 13/211 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F  SF +G VLS+    + R    +  +     Y+  F   G P L+ + L Y 
Sbjct: 19  PVTLGLFFASFAIGAVLSILLVAM-RVSANRPLRGFARGYMLIF--RGTPLLIQLFLLYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF+ +  S + P     F    ++L+  TA + AEI+R  L+A+P GQ+EA
Sbjct: 76  ------GLGQFSMVRNSVLWPLLREPFTCAVLSLALCTAGYTAEILRGALLAIPVGQIEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P A+R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GLACGMSRWLLLRRIIAPVALRYALPAWSTEAILLIKSTALASLVTVWDVTGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           T + +E+ +    IYL L+ +I      L  
Sbjct: 190 TYRTMEVFVCAALIYLLLNFIIVRAFAWLER 220


>gi|332161055|ref|YP_004297632.1| glutamine ABC transporter permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318604932|emb|CBY26430.1| glutamate transport membrane-spanning protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665285|gb|ADZ41929.1| glutamine ABC transporter permease protein [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860700|emb|CBX70993.1| glutamine transport system permease protein glnP [Yersinia
           enterocolitica W22703]
          Length = 218

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +     + + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FALPMMM-------PVRIDPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 90  TAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217


>gi|197333922|ref|YP_002154779.1| cystine transport system permease protein [Vibrio fischeri MJ11]
 gi|197315412|gb|ACH64859.1| cystine transport system permease protein [Vibrio fischeri MJ11]
          Length = 223

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++ ++  +  ++L+L    L R F       L  LYI
Sbjct: 1   MGFDFTYMIELLPILFKYLGTTMEMALWGLLFSLILALVLANL-RVFKVPVFDQLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P+    +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQVFPIFVGLD---------AFSAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSIGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++         K+
Sbjct: 169 LGVAEIMAKAQMEASSSFKFFEAFLAVALIYWGVVVILTRVQIWAEEKL 217



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 31/65 (47%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +A  G++ + I+  ++   R+    +   + ++Y+  FR  P LV +F LY  +
Sbjct: 19  LGTTMEMALWGLLFSLILALVLANLRVFKVPVFDQLSQLYISFFRGTPLLVQLFLLYYGL 78

Query: 153 LSVLP 157
             V P
Sbjct: 79  PQVFP 83


>gi|167828955|ref|ZP_02460426.1| amino acid ABC transporter, ATP-binding/permease protein
           [Burkholderia pseudomallei 9]
          Length = 300

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 1/264 (0%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R    ++    +   + SVL  P     +    FL+   LS    T+   A   +F F 
Sbjct: 21  VRTAGTVLAAVLIALVLNSVLGNPQWGWPVFAEWFLSEPVLSGLARTLLLTALGALFGFA 80

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQF 254
           LG+ L+L     S          + L      ++  L    L  L   +    P     F
Sbjct: 81  LGVPLALARVSRSPLLVACAWAFIWLFRSIPLIVLLLILNNLGYLYEHVRLGVPFTGITF 140

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA ALGL   +    +
Sbjct: 141 AEVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAALGLPRARQATRI 200

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQAMR+ +P   +  + L K SS+   +   +L      I  +  + I ++++    Y
Sbjct: 201 VLPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLEVIPLLMVATVWY 260

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L +  ++++   ++  + A    +
Sbjct: 261 LIILTVLSIVQAQVERRYARGAVR 284


>gi|297579919|ref|ZP_06941846.1| amino acid ABC transporter, permease [Vibrio cholerae RC385]
 gi|297535565|gb|EFH74399.1| amino acid ABC transporter, permease [Vibrio cholerae RC385]
          Length = 266

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYTWQWHRVPEYVLIFEDGQWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSHSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFATLQMILVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGQ 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSHSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|90418082|ref|ZP_01225994.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337754|gb|EAS51405.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 263

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 5/215 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + V SFV G V+SL    L R       + L  +++  F   G P +  I L Y 
Sbjct: 54  WITITLVVGSFVCGAVVSL-PVALGRMSANPVARTLAFVFVYFF--RGTPLIAQIFLVYY 110

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F +                 +     +L+  TAA+ AEI+R  + +VP GQ E A +L
Sbjct: 111 -GFGQFRGAFETVGLWWFFREAWYCALFSLTLNTAAYQAEILRGAIQSVPTGQWEGARSL 169

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+        V+LPQAM   + P  ++ + ++K S++   +   DL        ++T   
Sbjct: 170 GMPRVVIFFKVILPQAMIVALRPYANEIILMIKASAIVAIITVYDLFGETRQAYSRTFD- 228

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +    +YL++   +    N +  ++    K+
Sbjct: 229 FQTYVWAAVLYLAIVEGLRHATNFIERRLTRHLKR 263



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 33/94 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +  + L G   T  L     +   ++   V  GR+SAN +   +  V+V  FR  P + 
Sbjct: 44  RFGPSYLSGLWITITLVVGSFVCGAVVSLPVALGRMSANPVARTLAFVFVYFFRGTPLIA 103

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            IF +Y          +   +  F        L 
Sbjct: 104 QIFLVYYGFGQFRGAFETVGLWWFFREAWYCALF 137


>gi|54025809|ref|YP_120051.1| putative glutamate transporter permease [Nocardia farcinica IFM
           10152]
 gi|54017317|dbj|BAD58687.1| putative glutamate transporter permease protein [Nocardia farcinica
           IFM 10152]
          Length = 299

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 16/258 (6%)

Query: 141 PLVVIFFLYKSVLS-VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
            LVV +  +++         D       G       L     T+       VF+ V+G+V
Sbjct: 31  ILVVGYLFFRAFEEKGQFEADKWKPFLEGEVWETYLLPGLRGTIVAALLSIVFAMVIGMV 90

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
             +   RLS H   +      + +        +P L+L+   + L+ +  +    +    
Sbjct: 91  FGIL--RLSDHRWVRIVAGAIVEF-----ARAIPVLILMIFLFALYSEYDLFKSDDL--- 140

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                   ++  AL+ Y  + IAEIVR+G+ ++PRGQ EAA+ALGL   +  RL+LLPQA
Sbjct: 141 -----ALAAVVTALTVYNGSVIAEIVRAGIRSLPRGQTEAAMALGLRKNQLMRLILLPQA 195

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           + +++P L SQ +  LK+++L   + + ++V  G  +       I  +++   + ++L+ 
Sbjct: 196 ITAMLPALISQMVVALKDTALGYQITYVEIVRSGQQLGASESNTIPALIVVAVVMIALNS 255

Query: 380 MIALFMNRLNAKIALKEK 397
            + +   RL  ++    +
Sbjct: 256 TLTVVATRLERRLRAGRR 273



 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 17/133 (12%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            RV N    +++A  + V+                         E+  FE D+   P+  
Sbjct: 16  ARVRNHVFSVLVAAAILVVGYLF----------------FRAFEEKGQFEADK-WKPFLE 58

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              + T +L G   T   A   ++ A +IG + G  RLS ++ V  +    VE  R IP 
Sbjct: 59  GEVWETYLLPGLRGTIVAALLSIVFAMVIGMVFGILRLSDHRWVRIVAGAIVEFARAIPV 118

Query: 142 LVVIFFLYKSVLS 154
           L+++ FL+     
Sbjct: 119 LILMIFLFALYSE 131


>gi|296134852|ref|YP_003642094.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
 gi|295794974|gb|ADG29764.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
          Length = 228

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 119/234 (50%), Gaps = 11/234 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L F    +    ++ V + + G +L +    L+R  H K    L   YI+
Sbjct: 3   DFDFGSIVSVLPFLLKGLTYTIQLTVVAAIGGTLLGILL-ALARLSHLKWLSLLAAGYIN 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS---LYIALSCYTAAFIA 282
                 + ++ L+ + +  +F  PV+ Q   I GS   P+  +    Y     + AA+ A
Sbjct: 62  L-----MRSIPLLLVIFWFYFLVPVMLQ--SITGSDYPPKIGAERSAYFTFILFEAAYFA 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ ++P+GQ+ AA ALGLT+ ++ RL++LPQA+R+++P L +Q + L ++ SL  
Sbjct: 115 EIVRAGIQSIPKGQLGAAYALGLTYAQSMRLIILPQALRNMLPVLLTQTIVLFQDVSLVA 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   D V     I  +  + +E+  +   +Y  LS +++  + RL+ +IA+  
Sbjct: 175 LLNVTDFVGAAMKIAQRDSRVVEMYTLVAVVYFVLSFLLSQGVKRLHQRIAIVR 228



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L     I  T++G L+   RLS  K ++ +   Y+ + R+IP L+VIF+ 
Sbjct: 16  LLKGLTYTIQLTVVAAIGGTLLGILLALARLSHLKWLSLLAAGYINLMRSIPLLLVIFWF 75

Query: 149 YKSVL 153
           Y  V 
Sbjct: 76  YFLVP 80


>gi|237806947|ref|YP_002891387.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237499208|gb|ACQ91801.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 262

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 105/254 (41%), Gaps = 14/254 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
            +  + +   +           D + V     FL    LS           I+V     L
Sbjct: 14  QVTLVWLALMIGFIWFIAKFDLDMAYVWEKLPFLAGLHLSPDGFIQGVPLTIYVCVIAML 73

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
             V+      L R         +   Y S F   G P L+ + L YQ             
Sbjct: 74  ASVILGLLAALGRLSLNPLAYGISTFYTSFF--RGTPLLLQVLLIYQ-----------GL 120

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                +     S  IAL+    A+++EI RS ++A+PRGQ EAA+ALGL   +    V+L
Sbjct: 121 PQIGPIPTAIPSGIIALALCYGAYLSEIFRSAIVAIPRGQWEAAMALGLKKHQTFLKVIL 180

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ+M+  IPP  + ++ +LK+SSL   +G  +++ +  +      + +E+++    IY  
Sbjct: 181 PQSMKVAIPPGMAMFIAMLKDSSLVSVMGLWEIMFLAQSYGRSAYRYMEMLITAAVIYWI 240

Query: 377 LSIMIALFMNRLNA 390
           LS ++ L   RL  
Sbjct: 241 LSFLLELIQARLEK 254


>gi|182419568|ref|ZP_02950816.1| amino acid ABC transporter, permease protein PEB1 [Clostridium
           butyricum 5521]
 gi|237668932|ref|ZP_04528916.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376603|gb|EDT74178.1| amino acid ABC transporter, permease protein PEB1 [Clostridium
           butyricum 5521]
 gi|237657280|gb|EEP54836.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 242

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
           +  P             +  L    +T++        + VLG +  + +         K 
Sbjct: 1   MNGPFAWFKWEALFTDYHIFLEGLIVTIEVGLLGLALAIVLGTISGVMS-----TSKIKL 55

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            + +  +Y+   +I   P ++ +   +                 + V P F+   + +  
Sbjct: 56  LRIISRVYVE--IIQNTPLVIQVFFLFN-----------GLPYINIVLPVFLIGILGVGI 102

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y  A+I+E+VR+G+ ++ +GQ EA+ + G +H +  R ++LPQ ++ IIPPLT+Q +NL+
Sbjct: 103 YHGAYISEVVRTGITSISKGQFEASYSQGFSHIETMRYIILPQTIKIIIPPLTNQLVNLI 162

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           KN+S+   +  ADL+    +  +Q        ++   +Y  L   ++    ++  +
Sbjct: 163 KNTSVLAMIAGADLMHNADSWSSQNMFYGPAYVVTGILYFVLCYPLSAVARKMEIR 218



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 72/199 (36%), Gaps = 4/199 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G + T  +   G+  A ++GT+ G    S  KL+  I RVYVE+ +N P ++ +FFL
Sbjct: 20  FLEGLIVTIEVGLLGLALAIVLGTISGVMSTSKIKLLRIISRVYVEIIQNTPLVIQVFFL 79

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVLSLFAT 205
           +  +  +  +    ++   G+ + +       +     +     F  S+  G    +   
Sbjct: 80  FNGLPYINIVLPVFLIGILGVGIYHGAYISEVVRTGITSISKGQFEASYSQGF-SHIETM 138

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R             PL      LI     L +IA    +H       Q  F G + V   
Sbjct: 139 RYIILPQTIKIIIPPLTNQLVNLIKNTSVLAMIAGADLMHNADSWSSQNMFYGPAYVVTG 198

Query: 266 FMSLYIALSCYTAAFIAEI 284
            +   +       A   EI
Sbjct: 199 ILYFVLCYPLSAVARKMEI 217


>gi|312278333|gb|ADQ62990.1| L-cystine transport system permease protein TcyB [Streptococcus
           thermophilus ND03]
          Length = 190

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 97/203 (47%), Gaps = 14/203 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           SF++G   ++    + R   +   K    +YIS   + G+P LV++ + Y          
Sbjct: 2   SFIIGNFFAILL-AVMRMSQKPWLKYPARIYISF--MRGVPMLVVLFILY---------- 48

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F         P  +   I  S  +AA++AEI RS + AV +GQ +AA +LGL  +    
Sbjct: 49  -FGLPYVGIQIPTLLCAIIGFSTVSAAYMAEIFRSSISAVDKGQWKAAQSLGLPQKPIIH 107

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++LPQA+R  + P  +  ++++K+SSLA  +   D+      I  +    + + ++  F
Sbjct: 108 HIILPQALRIAVAPTCNVIIDMVKSSSLAAMITVPDIFQNAKIIGGREYDYMSMYILITF 167

Query: 373 IYLSLSIMIALFMNRLNAKIALK 395
           IY  LS ++ L   ++  ++ + 
Sbjct: 168 IYWVLSFILELLQGQVEKRLTVY 190


>gi|149907744|ref|ZP_01896491.1| ABC-type arginine transport system, permease component [Moritella
           sp. PE36]
 gi|149809414|gb|EDM69343.1| ABC-type arginine transport system, permease component [Moritella
           sp. PE36]
          Length = 224

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 7/210 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S ++G+VL++         +    K +      +F +  L  L  I + + + F
Sbjct: 17  LGLALTSLLVGLVLAILFCVAEMQKNPLIAKPI------SFFVTVLRGLPEILIVFFIFF 70

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           F S  +ALS   A++ ++ +R+ + +V +GQ + A ALG+ 
Sbjct: 71  GG-THILFLLTDEYYDISPFWSGVVALSLIFASYASQTLRAAIQSVSKGQQQGAQALGMG 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    + LPQA R  +P L +Q++ LLK+++L   +G  DL+     +   T +    
Sbjct: 130 PVRCFLRITLPQAWRLALPGLGNQWMVLLKDTALVSLIGVTDLMKQADLLSGSTYKPFTF 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++    IYL ++++    +  L+  I   +
Sbjct: 190 LVAAAAIYLIITLISQWLLKHLDNYINRFD 219


>gi|116254531|ref|YP_770367.1| putative ABC transporter permease component [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259179|emb|CAK10297.1| putative ABC transporter permease component [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 216

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 18/197 (9%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            V GI L L +   SR              I   +I G P L+ I   Y           
Sbjct: 33  IVFGIALGLVSLAQSRLIRTPVA-------IYVDVIRGTPLLIQIFFVY----------- 74

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F   G      EF +   AL    AAFIAE VR  + ++ +GQ EAA ++G+   +    
Sbjct: 75  FVLPGFGIGFNEFWAGVTALGLNGAAFIAETVRGAVGSIEKGQSEAARSIGMREHQTLIW 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +LLPQA+R I+PP T++ +NL KN+SL  A+   +L   G +I++     +E+  +    
Sbjct: 135 ILLPQALRQIVPPTTNEVINLTKNTSLLSAISVFELTRSGQSIVSMYFAPLEVYGLLAIY 194

Query: 374 YLSLSIMIALFMNRLNA 390
           Y  +   + +   +L  
Sbjct: 195 YYVIVKALTVLSRKLEN 211



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           V T  +A    I   + G  +G   L+ ++L+     +YV+V R  P L+ IFF+Y  + 
Sbjct: 19  VVTIQIAVLAGIAEIVFGIALGLVSLAQSRLIRTPVAIYVDVIRGTPLLIQIFFVYFVLP 78

Query: 154 SVLPIPDHSI 163
                 +   
Sbjct: 79  GFGIGFNEFW 88


>gi|239908613|ref|YP_002955355.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
 gi|239798480|dbj|BAH77469.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
          Length = 266

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 26/272 (9%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           PPL   FF   + ++ L +    + +  G+ +L    L +        A   +F   LG+
Sbjct: 5   PPLPRAFFRSVADMARLVVRFAILAVLAGLSWLVLSRLRYHWDWSAVWAYRSIFLDGLGL 64

Query: 199 VLSLFATR------------LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            L++                L+          L  LY+  F   G P LV I + Y    
Sbjct: 65  TLAVSVVAITLGLCFGLLSGLASVSGNLVLSELAALYVGAF--RGTPLLVQILIFY---- 118

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F       V   F+     LS ++ A+I+E+VR+G+ +V  GQ EAA++ G+T
Sbjct: 119 -------FCVGVVVRVDSPFVIGTFTLSLFSGAYISEMVRAGVESVDHGQWEAAMSSGMT 171

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A   V+LPQA R I+ P+T Q+++ +K+SSL   +   +L      +   T +  E 
Sbjct: 172 RGQALLHVVLPQAARRIVAPVTGQFVSCIKDSSLLSVISLRELTKAAEVVNASTYRTFET 231

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +YL L+  ++    RL   I    ++
Sbjct: 232 YLPLALLYLLLTWPLSHLTRRLERGIRNGMRE 263



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 33/75 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++  +Y +  L G   T  ++   +      G L G   +S N +++ +  +YV  FR
Sbjct: 47  DWSAVWAYRSIFLDGLGLTLAVSVVAITLGLCFGLLSGLASVSGNLVLSELAALYVGAFR 106

Query: 138 NIPPLVVIFFLYKSV 152
             P LV I   Y  V
Sbjct: 107 GTPLLVQILIFYFCV 121


>gi|104773643|ref|YP_618623.1| glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422724|emb|CAI97351.1| Glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 222

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 15/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + SFV+G+ L L           +  K + +      +I  +  L
Sbjct: 17  LQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGV------IIDIIRNL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  PV+              F +  IA+  + +A IAE+VRSG++AV  G
Sbjct: 71  PLLLIIFFSYFGLPVM--------GIRVDAFQASVIAMVVFESAMIAEVVRSGIMAVDPG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + G+T+ +A   V+LPQA+  +IP L SQ+++L+K++SLA  +   +L+     
Sbjct: 123 QMEGARSNGMTYMQAMTHVVLPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEI 182

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I NQ T   I + L    +Y  +   ++ F N L+ +I 
Sbjct: 183 IYNQNTNYMIPMYLAVAVMYFIICFALSSFANYLSKRIK 221



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----VAWICRVYVEVFR 137
                  +L GF  T  ++   +I + +IG  +G  R +        ++ +  V +++ R
Sbjct: 9   SWINLRFLLQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGVIIDIIR 68

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI 163
           N+P L++IFF Y  +  +    D   
Sbjct: 69  NLPLLLIIFFSYFGLPVMGIRVDAFQ 94


>gi|27382024|ref|NP_773553.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355194|dbj|BAC52178.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 213

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 14/213 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +    FV+G +  L    L+R    +  + +   YI+ F   G P L+ + + Y  
Sbjct: 15  WTLALSAIGFVVGSIAGLGV-ALARTSGHRALERVAAGYIALF--QGTPLLMQLFVVYY- 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                ++S+ I  + ++ AF+ EI R  + AVP+GQ+EAA AL 
Sbjct: 71  ----------GLALAGLKLDAWVSVSIGFTLHSGAFLGEIWRGAIEAVPKGQVEAAKALS 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L +    + V+LPQA+R  +P      + L+K +SLA  +GF +L+  G  + NQ  + +
Sbjct: 121 LNYGSQMQDVVLPQAIRISLPATIGFLVQLIKGTSLAAIIGFTELMRAGTIVSNQNFKPL 180

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++ +   +Y ++   ++L   +L  ++A+  +
Sbjct: 181 LVLGLVCVLYFAICWPLSLVGAQLERRMAVAAR 213



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+  G +  +I G  V   R S ++ +  +   Y+ +F+  P L+ +F +
Sbjct: 9   LLGGLKWTLALSAIGFVVGSIAGLGVALARTSGHRALERVAAGYIALFQGTPLLMQLFVV 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +       D  + +  G  L++             A
Sbjct: 69  YYGLALAGLKLDAWVSVSIGFTLHSGAFLGEIWRGAIEA 107


>gi|330874083|gb|EGH08232.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 215

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++ L    + R   +   +    LYI  F  
Sbjct: 3   FTLWDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVM-RTSEKSGPRVAAKLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +L +T  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESISKGQWEASASLAMTPLEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHLERRL 211



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG LV   R S         ++Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVMRTSEKSGPRVAAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|15604006|ref|NP_220521.1| putative glutamine transport system permease protein GLNP (glnP)
           [Rickettsia prowazekii str. Madrid E]
 gi|729594|sp|P41083|GLNP_RICPR RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|409937|gb|AAA18328.1| putative GlnP analog [Rickettsia prowazekii]
 gi|3860697|emb|CAA14598.1| PUTATIVE GLUTAMINE TRANSPORT SYSTEM PERMEASE PROTEIN GLNP (glnP)
           [Rickettsia prowazekii]
 gi|292571724|gb|ADE29639.1| Amino acid ABC transporter permease protein [Rickettsia prowazekii
           Rp22]
          Length = 218

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      + F         K  V + +LG+V+ +    + +    +  +     Y 
Sbjct: 1   MLMYLLKYYPKILFIIEGTLVTLKYSVIAVILGLVIGMLL-AICKVNKNRVLRLFANFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV +++ Y   F  P +    F         FM+  I+ +  + A+++E+
Sbjct: 60  SIF--RGTPLLVQLSIIY---FAAPYIINIKF-------NVFMAGVISFALNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+  V +GQ EAA AL +      + ++LPQA+ +I P L ++ +NL+K S++   +
Sbjct: 108 IRAGINTVDKGQFEAAEALAIPKFLIMKDIILPQAINNIFPSLVNELVNLIKESAIISML 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      +LI    Y  L I+I+     +  K+
Sbjct: 168 GEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVILISFIAKIIEKKM 215



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N+++      Y  +FR  P LV +  +
Sbjct: 15  IIEGTLVTLKYSVIAVILGLVIGMLLAICKVNKNRVLRLFANFYTSIFRGTPLLVQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFAAP 79


>gi|317491412|ref|ZP_07949848.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920959|gb|EFV42282.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 238

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 8/236 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPLL 222
           M      LS   +T+  +    V   +L ++ +++                   + LP +
Sbjct: 1   MIEFQPLLSAAGMTVGLSLCALVLGLILAMIFAVWESSNIKPVAWLGTAWVTLVRGLPEI 60

Query: 223 YISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +  F+ FG   L+++    + L+     +     I    VSP F+   IAL+   AA+ 
Sbjct: 61  LVVLFIYFGSAQLLMVLSDGFSLNLGFVQIPIQLNIENFEVSP-FVCGVIALALLYAAYA 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP GQ EA  ALGL+       +++PQ  R  +P L +Q+L LLK+++L 
Sbjct: 120 SQTLRGALKAVPEGQREAGQALGLSKSAIFFRLVMPQMWRHALPGLGNQWLVLLKDTALV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   DL+    +I  +T +     ++   IYL +++     + R+  +    E+
Sbjct: 180 SLISVNDLMLQTKSIATRTQEPFTWYMVAAAIYLVITLFSQYILKRIELRTTRFER 235


>gi|291618614|ref|YP_003521356.1| YecS [Pantoea ananatis LMG 20103]
 gi|291153644|gb|ADD78228.1| YecS [Pantoea ananatis LMG 20103]
 gi|327394994|dbj|BAK12416.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Pantoea ananatis AJ13355]
          Length = 214

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + V +     +L L A  L R       + + ++Y   F   G P L
Sbjct: 9   LPLLWRGLVITLLLSVAAIAGSTLLGLLAAIL-RTSRIPVARQIAVIYTELF--RGTPVL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y           F           F +  + LS Y  A+IAEI R G+ AVP+G
Sbjct: 66  ITLMFIY-----------FGVAYFGYDINLFAAGILGLSIYQGAYIAEIFRGGIEAVPKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E +  LGL+ R+    V+LPQ    ++PPL  QYL+L+K++S+   +G ++L+  G  
Sbjct: 115 QWEVSWILGLSRRQTFTSVILPQTRGIVLPPLVGQYLSLIKDTSIVSMIGMSELMHQGQA 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I+++ GQ + +  +   +Y  +   ++ ++     +
Sbjct: 175 IVDRIGQPVVVYGLVALLYFVICFPLSRWVQHQQTR 210



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L+ + +  +T++G L    R S   +   I  +Y E+FR  P L+ + F+
Sbjct: 12  LWRGLVITLLLSVAAIAGSTLLGLLAAILRTSRIPVARQIAVIYTELFRGTPVLITLMFI 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGI 198
           Y  V       +       G+ +               A     +  S++LG+
Sbjct: 72  YFGVAYFGYDINLFAAGILGLSIYQGAYIAEIFRGGIEAVPKGQWEVSWILGL 124


>gi|238898834|ref|YP_002924516.1| arginine transport protein (ABC superfamily, membrane) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466594|gb|ACQ68368.1| arginine transport protein (ABC superfamily, membrane) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 236

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 16/233 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLI 229
           L+   +T+       +    LGI+ ++  +   R      H      + LP + I  F+ 
Sbjct: 8   LNATGMTLSLALCSLLVGLFLGILFAICESSKYRGLRYLIHGWGILLRGLPEILIVFFIY 67

Query: 230 FGLPTLVLIA-----LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           FG   L ++      + + L F+ P+    NF+  S     F+   IAL+   +A+ A+I
Sbjct: 68  FGSSELFILLTDGFTINFYL-FELPIKCHSNFLEIS----PFLCAVIALALLYSAYAAQI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R    A+  GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +
Sbjct: 123 FRGAFKAISFGQRESGQALGLSSFFIFIRLIMPQMWRHALPGLGNQWLILLKDTALVSLI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              D++     I  +T +      I   IYL ++++    +  L       E+
Sbjct: 183 SVNDVMLQAKNIAVRTQEPFTWYFIAALIYLVITLISQYLIKCLEIYTTRFER 235


>gi|239918350|ref|YP_002957908.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
 gi|281415453|ref|ZP_06247195.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
 gi|239839557|gb|ACS31354.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
          Length = 276

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 16/190 (8%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R       + L   Y+  F       LV +A  Y + F                 P 
Sbjct: 93  ALMRLSSFGPYRWLATAYVEFFR-GVPALLVFLAFGYGVPFAF-----------GVSWPI 140

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + +  AL   +AA+IAE +R+GL AVPRGQMEAA +LG+   +A   +++PQA R ++P
Sbjct: 141 PVVVMAALGMVSAAYIAETLRAGLQAVPRGQMEAARSLGMPTWRAMVTIVIPQAFRIVLP 200

Query: 326 PLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           PLT++ + L K+SSL   +G A    +L   G   I+     +  IL+    YL +++ +
Sbjct: 201 PLTNEVILLTKDSSLVYVLGLAAHEYELTKFGRDGISALDAGMTPILVAGLFYLVITVPL 260

Query: 382 ALFMNRLNAK 391
           +L   R  A+
Sbjct: 261 SLLARRFEAR 270



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ILVG  NT +   +  +   + G ++   RLS+     W+   YVE FR +P L+V   
Sbjct: 66  VILVGLGNTLFYTVTSFVVGLLGGVVLALMRLSSFGPYRWLATAYVEFFRGVPALLVFLA 125

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
               V     +     V+  
Sbjct: 126 FGYGVPFAFGVSWPIPVVVM 145


>gi|160913600|ref|ZP_02076290.1| hypothetical protein EUBDOL_00076 [Eubacterium dolichum DSM 3991]
 gi|158434061|gb|EDP12350.1| hypothetical protein EUBDOL_00076 [Eubacterium dolichum DSM 3991]
          Length = 227

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 102/235 (43%), Gaps = 14/235 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               V+ F   +           +    +I     ++G ++ L    L R    K  + +
Sbjct: 4   KERTVMNFDFTIIAEYWQLIISGIPLILEISFICAMMGTIIGLSTAFLRRKS--KILEKV 61

Query: 220 PLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              YI  F   G P  V +    Y L    P L              F+   I  S  + 
Sbjct: 62  IAAYIDIF--RGTPVYVQLVFFCYGLCSLFPSL---------NNVSPFVWALIVFSLNSG 110

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+++EI+R+G+  + +GQ+EAA ALG++ +   + +++P A R+++P + ++++ L K +
Sbjct: 111 AYLSEIIRAGVEGIDKGQIEAAKALGVSRKDIAKDIVVPLAFRNVLPAVVNEFITLTKET 170

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++   +G  D++     + ++     E +L+    Y  ++ +++L    +  K+ 
Sbjct: 171 AVVGVIGLHDMMYYSDAVTSKFYSFFEPLLVVFVAYYIMNKVLSLLGKWVERKLK 225



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 1/94 (1%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T  + Y   I+ G      ++F   +  TIIG      R   +K++  +   Y+++FR
Sbjct: 12  DFTIIAEYWQLIISGIPLILEISFICAMMGTIIGLSTAFLRR-KSKILEKVIAAYIDIFR 70

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
             P  V + F    + S+ P  ++     + + +
Sbjct: 71  GTPVYVQLVFFCYGLCSLFPSLNNVSPFVWALIV 104


>gi|15892094|ref|NP_359808.1| amino acid ABC transporter permease protein [Rickettsia conorii
           str. Malish 7]
 gi|34580875|ref|ZP_00142355.1| amino acid ABC transporter permease protein [Rickettsia sibirica
           246]
 gi|229586369|ref|YP_002844870.1| Amino acid ABC transporter permease protein [Rickettsia africae
           ESF-5]
 gi|238650695|ref|YP_002916548.1| amino acid ABC transporter permease protein [Rickettsia peacockii
           str. Rustic]
 gi|81774423|sp|Q92J96|GLNP_RICCN RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|15619217|gb|AAL02709.1| amino acid ABC transporter permease protein [Rickettsia conorii
           str. Malish 7]
 gi|28262260|gb|EAA25764.1| amino acid ABC transporter permease protein [Rickettsia sibirica
           246]
 gi|228021419|gb|ACP53127.1| Amino acid ABC transporter permease protein [Rickettsia africae
           ESF-5]
 gi|238624793|gb|ACR47499.1| amino acid ABC transporter permease protein [Rickettsia peacockii
           str. Rustic]
          Length = 218

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      + F         K  V + + G+V+ +    + +    +  +     Y 
Sbjct: 1   MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLL-AICKVNKNRALRLFANFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ +++ Y   F  P +    F         FM+  IA S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLSIIY---FASPYIIGIKF-------SVFMAGAIAFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EAA AL +     T+ ++LPQA+++I P L ++ +NL+K S++   +
Sbjct: 108 IRAGINAVDKGQFEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISML 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      +LI    Y  L ++I+     +  K+
Sbjct: 168 GEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKM 215



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N+ +      Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|238761693|ref|ZP_04622668.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
 gi|238700207|gb|EEP92949.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
          Length = 220

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 14/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L        T A + V + V G  + +    L    H + G+    +YIS F   G P 
Sbjct: 12  WLPMLIDGAVTTASLCVVAIVAGFFIGVVIY-LMESGHSRFGRGFARVYISLF--RGTPV 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L  + L + L  +                P +++  +AL+  TAA+ ++I+RSG  A+P 
Sbjct: 69  LAQVLLCFYLPGEL-----------GLSLPGYLAAVMALTLNTAAYQSQILRSGFAAIPP 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA   GL+ R+    + +PQ +R  +P L S+ ++++K S++   +   DL+ VG 
Sbjct: 118 GQLEAAAMCGLSSRQTLWYIQIPQVLRLTMPSLISELIDVIKASAVVSVIAITDLMRVGQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            + + T + +E+ +     YL L+ ++AL  + +  +   + +
Sbjct: 178 QLASATYRPLEVYIAIALSYLVLTSLLALLGSYVERRWHKESR 220



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S+   ++ G V T  L    ++    IG ++       ++      RVY+ +FR 
Sbjct: 6   FQLLKSWLPMLIDGAVTTASLCVVAIVAGFFIGVVIYLMESGHSRFGRGFARVYISLFRG 65

Query: 139 IPPLVVIFFLYK 150
            P L  +   + 
Sbjct: 66  TPVLAQVLLCFY 77


>gi|222109009|ref|YP_002551275.1| hypothetical protein Arad_14101 [Agrobacterium radiobacter K84]
 gi|221727931|gb|ACM30981.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 232

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F ++   R +      +     I V + ++   L L  + + +    +   A+  +YI
Sbjct: 1   MTFDVYYMFRIIPSILYYLPITIYISVVAMIIAAALGLGLSVMLQA--NRLTAAIARVYI 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P LV + + Y   F  P L        +       ++ I L  +TAA++AEI
Sbjct: 59  SFF--RGTPVLVQLLIIY---FGLPQL-----FPAALGISPVNAVIIGLGLHTAAYLAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ L AV  GQ EAA+++GLT  +A   V+  QA+R  IPP  + ++ L+KNSSLA  +
Sbjct: 109 FRAALAAVGPGQKEAALSIGLTPVQAFTDVVARQAIRHAIPPTGNIFIGLVKNSSLAFTL 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  ++++    + ++  +  E       +Y + +I+     + L   +  
Sbjct: 169 GVTEVLAQSKLLASENLKFFEAYFAAGLVYWAFTILYTFGQDWLERYLNR 218


>gi|90409072|ref|ZP_01217197.1| putative ABC-type arginine transport system, permease component
           [Psychromonas sp. CNPT3]
 gi|90309829|gb|EAS37989.1| putative ABC-type arginine transport system, permease component
           [Psychromonas sp. CNPT3]
          Length = 246

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 7/210 (3%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-------LHFD 247
            L  + S    R     +    + +P L +   + FG   LV     +        +   
Sbjct: 37  ALAKLSSSVTLRYCATLYSTLIRGIPDLILMLLIFFGGQILVNNMSYWINENLNSLITRF 96

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 + F+        + +  + +     A++ E  R  ++AV +GQ+EAA A G++ 
Sbjct: 97  DSSHQWYGFLPDYIDISPYFAGIVTIGFIFGAYMTETFRGAILAVDKGQIEAARAYGMSQ 156

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            K    VL PQ MR  +P + + +L LLK ++L   +G  D+V + G     T Q     
Sbjct: 157 YKVFSRVLFPQMMRHALPGIGNNWLVLLKATALVSVIGLQDMVKIAGDAAGATQQPFTFY 216

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L   FI+L  + + ++F+     + ++K +
Sbjct: 217 LAIAFIFLFFTSVSSVFLKWAEHRYSIKVR 246



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 8/123 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y   ++ G   T  +A   ++ A  +G +    +LS++  + +   +Y  + R IP L
Sbjct: 5   QNYQQILIAGAWLTIQVALLSLLLALFLGLIGALAKLSSSVTLRYCATLYSTLIRGIPDL 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVL--------PFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +++  ++     ++    + I                    L          A I    F
Sbjct: 65  ILMLLIFFGGQILVNNMSYWINENLNSLITRFDSSHQWYGFLPDYIDISPYFAGIVTIGF 124

Query: 195 VLG 197
           + G
Sbjct: 125 IFG 127


>gi|225620108|ref|YP_002721365.1| ABC-type amino acid transport system, permease [Brachyspira
           hyodysenteriae WA1]
 gi|225214927|gb|ACN83661.1| HisM, ABC-type amino acid transport system, permease component
           [Brachyspira hyodysenteriae WA1]
          Length = 216

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 105/231 (45%), Gaps = 16/231 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + +      L     T+       +FS  L ++ +       +           +  I
Sbjct: 1   MDYVISTTLYLLKGTYTTLSLYFVTAIFSLPLSMLFAALQFSSPKFVRY-------IFDI 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             ++  G P ++ +   Y   +  P++            P F S  I      +A++ EI
Sbjct: 54  YAWIFRGTPLILQLIFFY---YGLPLMTN-----NMIAFPAFTSAAITFVLNYSAYLMEI 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQ EA  AL L++R+    ++LPQA+R ++PPL+++ +NL+K+++L + +
Sbjct: 106 FRAGIESIEKGQYEAGFALNLSYRQIMTRIILPQAVRRVLPPLSNEAINLIKDTALVIVL 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  DL+     I+ +  + +   LI   IYL  + ++     +L  K  ++
Sbjct: 166 GIGDLMLHARQILTRDYKLLP-FLIAAIIYLLFTSILVFVFRQLEKKYVIR 215


>gi|121610492|ref|YP_998299.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121555132|gb|ABM59281.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 219

 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 15/231 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYIS 225
           M  +   +      +   A + +   VL ++L++       L R    +  + + L ++ 
Sbjct: 1   MTFDWSVIWTHRQALLEGAALTIALTVLTMLLAVPGGIVLALMRLSANRLLQRMSLCFVE 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F       L LI + Y   +  P+                 +  +AL    +A+ AE  
Sbjct: 61  FFRN-----LPLILVIYWAFYVMPMATGL-------QMSPLATALVALVLNISAYNAETF 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++ +GQ+EAA+A+G++  +A R V++PQA R I+P + S ++ L K++SL   + 
Sbjct: 109 RAGINSIRKGQLEAALAMGMSRHQALRKVVIPQATRRILPVIASTWVALFKDTSLVSVIA 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L      I  QT + +E++     IY  +    A  ++ ++    +KE
Sbjct: 169 VGELAYSAMQIRAQTFRVLELLTAMAAIYWLMGYPQAKLVDWIHRHYGVKE 219



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 41/78 (52%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++   ++  A+L G   T  L    M+ A   G ++   RLSAN+L+  +   +VE FR
Sbjct: 4   DWSVIWTHRQALLEGAALTIALTVLTMLLAVPGGIVLALMRLSANRLLQRMSLCFVEFFR 63

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N+P ++VI++ +  +   
Sbjct: 64  NLPLILVIYWAFYVMPMA 81


>gi|315037817|ref|YP_004031385.1| glutamine ABC transporter membrane protein [Lactobacillus
           amylovorus GRL 1112]
 gi|325956292|ref|YP_004286902.1| glutamine ABC transporter membrane protein [Lactobacillus
           acidophilus 30SC]
 gi|312275950|gb|ADQ58590.1| glutamine ABC transporter membrane protein [Lactobacillus
           amylovorus GRL 1112]
 gi|325332857|gb|ADZ06765.1| glutamine ABC transporter membrane protein [Lactobacillus
           acidophilus 30SC]
 gi|327183111|gb|AEA31558.1| glutamine ABC transporter membrane protein [Lactobacillus
           amylovorus GRL 1118]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFV+G++L L      ++     G    
Sbjct: 2   ETFIHAYSWVDIRFLLQGLWVTIYVSLISIALSFVVGLILGLIRYMKVKYLSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+    +   AL  +  A 
Sbjct: 58  ------FIIDIIRNLPLLLIIFFTYFGLPQL--------GIVTNPTTASITALVIFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ +V  GQME A + G+++ +A   V++PQA+ ++IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIGSVDPGQMEGARSNGMSYGQAMYHVIMPQALHNMIPALLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I I +I   +Y  +   ++   N L  K 
Sbjct: 164 ATIIVLPELLYHAQIIYSQNTTYLIPIYVIIAVMYFIVCFCLSQVANYLQKKY 216



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 36/71 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R    K ++ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLIRYMKVKYLSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|238787849|ref|ZP_04631646.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia frederiksenii ATCC 33641]
 gi|238724192|gb|EEQ15835.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia frederiksenii ATCC 33641]
          Length = 245

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 4/245 (1%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRH 210
           +++    D  +   +  +L +  L    ++  T     +  F+L       L A +    
Sbjct: 1   MNLHHFTDWLLAPQYLSWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALQWFAI 60

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
            +    +  PLL    F  F    L+  +    L  + P       +  S  S EF++ +
Sbjct: 61  GYSTLFRNTPLLIQLFFWYFAASQLLPTSWIPWL--NTPHEITVFNLTLSWPSFEFLAGF 118

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ Y+ AFIAE +RSG+  V +GQ  AA ALGLT  ++ R V+LPQA++  +PPL  Q
Sbjct: 119 IGLTLYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIALPPLLGQ 178

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           Y+N++KNSSLA+A+G A+L      +  +T +  +   +   +Y+++  +I  +      
Sbjct: 179 YMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQ 238

Query: 391 KIALK 395
           + A++
Sbjct: 239 RTAIR 243



 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 42/89 (47%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
               +     Y + +  GF+ T W++   ++ AT++G L+ A R S  K + W    Y  
Sbjct: 5   HFTDWLLAPQYLSWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALQWFAIGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +   +LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQLLPTSWIPW 93


>gi|53720531|ref|YP_109517.1| glutamate/aspartate transport system permease [Burkholderia
           pseudomallei K96243]
 gi|67643523|ref|ZP_00442268.1| glutamate/aspartate transport system permease protein GltJ
           [Burkholderia mallei GB8 horse 4]
 gi|76811358|ref|YP_334804.1| glutamate/aspartate transport system permease [Burkholderia
           pseudomallei 1710b]
 gi|121598614|ref|YP_991700.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei SAVP1]
 gi|124386224|ref|YP_001027195.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei NCTC 10229]
 gi|126439941|ref|YP_001060406.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 668]
 gi|126449942|ref|YP_001082147.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei NCTC 10247]
 gi|126454005|ref|YP_001067667.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1106a]
 gi|166998512|ref|ZP_02264370.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei PRL-20]
 gi|167721208|ref|ZP_02404444.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei DM98]
 gi|167740180|ref|ZP_02412954.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 14]
 gi|167817395|ref|ZP_02449075.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 91]
 gi|167825801|ref|ZP_02457272.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 9]
 gi|167847285|ref|ZP_02472793.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei B7210]
 gi|167895873|ref|ZP_02483275.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 7894]
 gi|167912522|ref|ZP_02499613.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 112]
 gi|167920473|ref|ZP_02507564.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei BCC215]
 gi|217420960|ref|ZP_03452465.1| polar amino acid ABC transporter, permease protein, PAAT family
           [Burkholderia pseudomallei 576]
 gi|226196826|ref|ZP_03792405.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei Pakistan 9]
 gi|237813797|ref|YP_002898248.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei MSHR346]
 gi|242316198|ref|ZP_04815214.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1106b]
 gi|254178933|ref|ZP_04885587.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei ATCC 10399]
 gi|254180662|ref|ZP_04887260.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1655]
 gi|254190905|ref|ZP_04897411.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254199044|ref|ZP_04905459.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei S13]
 gi|254202700|ref|ZP_04909063.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei FMH]
 gi|254208040|ref|ZP_04914390.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei JHU]
 gi|254261249|ref|ZP_04952303.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1710a]
 gi|254299253|ref|ZP_04966703.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 406e]
 gi|52210945|emb|CAH36933.1| glutamate/aspartate transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|76580811|gb|ABA50286.1| glutamate/aspartate transport system permease protein [Burkholderia
           pseudomallei 1710b]
 gi|121227424|gb|ABM49942.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei SAVP1]
 gi|124294244|gb|ABN03513.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei NCTC 10229]
 gi|126219434|gb|ABN82940.1| polar amino acid ABC transporter, permease protein, PAAT family
           [Burkholderia pseudomallei 668]
 gi|126227647|gb|ABN91187.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1106a]
 gi|126242812|gb|ABO05905.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei NCTC 10247]
 gi|147746947|gb|EDK54024.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei FMH]
 gi|147751934|gb|EDK59001.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei JHU]
 gi|157809165|gb|EDO86335.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 406e]
 gi|157938579|gb|EDO94249.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160694847|gb|EDP84855.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei ATCC 10399]
 gi|169656874|gb|EDS88271.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei S13]
 gi|184211201|gb|EDU08244.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1655]
 gi|217396372|gb|EEC36389.1| polar amino acid ABC transporter, permease protein, PAAT family
           [Burkholderia pseudomallei 576]
 gi|225931086|gb|EEH27094.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei Pakistan 9]
 gi|237506385|gb|ACQ98703.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei MSHR346]
 gi|238524886|gb|EEP88316.1| glutamate/aspartate transport system permease protein GltJ
           [Burkholderia mallei GB8 horse 4]
 gi|242139437|gb|EES25839.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1106b]
 gi|243065197|gb|EES47383.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia mallei PRL-20]
 gi|254219938|gb|EET09322.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia pseudomallei 1710a]
          Length = 246

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++V+ +V+      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLVAWVIALVVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    PV            +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVVPELLPVSIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + +K
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFMRWVESK 236



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 47/95 (49%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A ++G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLVAWVIALVVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP+   + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVVPELLPVSIGTWI 101


>gi|227431442|ref|ZP_03913491.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352808|gb|EEJ42985.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 213

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 15/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                             + + ++ ++L  F   L +   +   + +  +Y+  F    L
Sbjct: 5   QNNFPTFLQGFGYTLLSSIIALIISMILGTFFAIL-QILPQNWAQKIGNVYVQVFRNIPL 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +                  F  +        F +  IALS YT+AFIAE VR+G+++V
Sbjct: 64  LIITFFF--------------FLVVAKVIPMNGFAAGTIALSLYTSAFIAETVRAGILSV 109

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQME A A GL+  ++ R ++LPQA +  +P L +Q++NL+KNSS+   VG  DL+  
Sbjct: 110 DNGQMEGARANGLSFNQSMRYIVLPQAFKIALPSLGNQFINLVKNSSILAFVGGLDLMYQ 169

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +   T       +I    YL +++ ++ +M  L  K+ 
Sbjct: 170 GNMVAAATFDTFSTYIIVALFYLVITLPLSYYMQNLERKLK 210



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 36/70 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+GT     ++        I  VYV+VFRNIP L++ FF 
Sbjct: 11  FLQGFGYTLLSSIIALIISMILGTFFAILQILPQNWAQKIGNVYVQVFRNIPLLIITFFF 70

Query: 149 YKSVLSVLPI 158
           +  V  V+P+
Sbjct: 71  FLVVAKVIPM 80


>gi|83035006|gb|ABB97482.1| GlnB [Halobacillus dabanensis]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 13/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              R + F    +     I     ++G VL       +R    K    +  +Y+    + 
Sbjct: 8   HYYRVMPFLLEGLVWTLLITFVGLIIGFVLG-AIFGFARLSKNKLIYGIATVYVEA--VR 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L  I   Y   F    L   N    +           A          EIVR  + 
Sbjct: 65  GTPILAQILFIY---FGLSDLMGVNIDKITASIIAIAINAGAYIA-------EIVRGAVY 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ EA  ++GLT  +  R ++ PQA R +IPPL +Q++  LK++SL   +   +L+
Sbjct: 115 SIDKGQEEAGRSIGLTRNQTMRYIIWPQAFRRMIPPLGNQFVISLKDTSLFSVIAVGELL 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +G      T QA + + +   +YL +++  A+++ R+  ++ +
Sbjct: 175 YMGQQYYGMTFQAFQALTMVCVMYLIITVPTAIYLRRVERRLDV 218



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 77  VPYTSDSSYATA---ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           + + ++S Y      +L G V T  + F G+I   ++G + G  RLS NKL+  I  VYV
Sbjct: 1   MEFITESHYYRVMPFLLEGLVWTLLITFVGLIIGFVLGAIFGFARLSKNKLIYGIATVYV 60

Query: 134 EVFRNIPPLVVIFFLYKSVLSVL 156
           E  R  P L  I F+Y  +  ++
Sbjct: 61  EAVRGTPILAQILFIYFGLSDLM 83


>gi|50123384|ref|YP_052551.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium atrosepticum SCRI1043]
 gi|49613910|emb|CAG77363.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium atrosepticum SCRI1043]
          Length = 242

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 113/228 (49%), Gaps = 11/228 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                +FP   +   A   V S + G+  ++  T L        G    LL +       
Sbjct: 12  YLMWGTFPDGPLGGAALTLVMSLLAGVASAVLGTILGVALAMSRGGWSALLAMVLGFFRA 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A
Sbjct: 72  IPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ +A ++LGL+  +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  
Sbjct: 122 IGRGQWQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTF 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   + N++    +E+ L    +Y    + + L  N +NA+ + +EK+
Sbjct: 182 LATQVNNRSMVYPMEVFLFVALVYFVFCLSLELLANGVNARFSQQEKQ 229


>gi|330965545|gb|EGH65805.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 215

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++ L    + R   +   +    LYI  F  
Sbjct: 3   FTLWDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVM-RTSEKSGPRVAAKLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +L +T  +  R V+LPQA+R  I P     + ++K +++   +GF +L
Sbjct: 109 ESISKGQWEASASLAMTPLEQMRYVILPQALRIAIAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHLERRL 211



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG LV   R S         ++Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVMRTSEKSGPRVAAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|157363726|ref|YP_001470493.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157314330|gb|ABV33429.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 223

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 111/210 (52%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + +F+ + G ++ +    + R +  K  + +   +I   LI G P LV + +   L
Sbjct: 20  TTLYMTLFAAITGFIMGIILC-VGRIYGRKIIRFICAGFIE--LIRGTPMLVQLFI---L 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  PV                M+  I     ++A+ AE +R  + ++  GQM AA+++G
Sbjct: 74  YYGLPVY--------GIRLTPLMAALIGFCINSSAYQAEYIRGAIQSIGSGQMVAALSIG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +A RL++LPQA+R +IP  T++++ LLK +S+A  +G  ++++    I ++  +  
Sbjct: 126 MTKWQAVRLIILPQALRRVIPAWTNEFIYLLKYTSMAYIIGAPEMMAQAKFIASRNFEFF 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++ L+  FIY++L  +  +  ++L  ++ +
Sbjct: 186 KVYLLTAFIYIALVWLATVLFSKLEKRLQI 215



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 15/199 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T ++     I   I+G ++  GR+   K++ +IC  ++E+ R  P LV +F L
Sbjct: 14  LLNGLVTTLYMTLFAAITGFIMGIILCVGRIYGRKIIRFICAGFIELIRGTPMLVQLFIL 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLG------IV 199
           Y  +          +    G  +N+       +     +      V +  +G      + 
Sbjct: 74  YYGLPVYGIRLTPLMAALIGFCINSSAYQAEYIRGAIQSIGSGQMVAALSIGMTKWQAVR 133

Query: 200 LSLFATRLSRHFHEKTGKALPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           L +    L R     T + + LL Y S   I G P +       Q  F      +F  + 
Sbjct: 134 LIILPQALRRVIPAWTNEFIYLLKYTSMAYIIGAPEM-----MAQAKFIASRNFEFFKVY 188

Query: 259 GSTVSPEFMSLYIALSCYT 277
             T       +++A   ++
Sbjct: 189 LLTAFIYIALVWLATVLFS 207


>gi|327440167|dbj|BAK16532.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 248

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 16/231 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIF--VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +F NN  L            I   +   ++G  + +  T   R  + K+       +I
Sbjct: 8   WNLFTNNWDLFVRGAWTALLLAIIGTICGTLVGFFIGIMHTIPQRKKNVKSIVLKVFNFI 67

Query: 225 STF---LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            T    +  G P +V   + +              +        F++  + +S  T A++
Sbjct: 68  LTSYVEIFRGTPMMVQAMVVFY-----------GLVYLGIDIDRFLAASVVISLNTGAYM 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VR G++++ +GQ EAA A+G+ H +    ++LPQ  R+I+P   +Q++  +K+SS+ 
Sbjct: 117 AEYVRGGIVSIDKGQFEAAQAIGMNHLQTMIHIVLPQVARNILPATGNQFVMNIKDSSVL 176

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   +L     +I     + IE   I   +Y  ++  +  F+     K+
Sbjct: 177 SVISVVELFFTANSIAGSNYKYIEAFFIATILYFIMTFTVTRFLLLFEKKM 227



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 10/105 (9%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA----------NKLVAWICRVYVEV 135
               + G      LA  G I  T++G  +G                 K+  +I   YVE+
Sbjct: 15  WDLFVRGAWTALLLAIIGTICGTLVGFFIGIMHTIPQRKKNVKSIVLKVFNFILTSYVEI 74

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           FR  P +V    ++  ++ +    D  +     + LN        
Sbjct: 75  FRGTPMMVQAMVVFYGLVYLGIDIDRFLAASVVISLNTGAYMAEY 119


>gi|325277399|ref|ZP_08143019.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324097472|gb|EGB95698.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 215

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +    + M     + + +F+ G V  L    L+R       +     YI  F  
Sbjct: 3   FTLWDIVRNLLVGMQWTLLLSLVAFICGGVAGLLVL-LARLSDNFVLRGAAKGYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F           +M+  IAL+ +T+AF+AE  R  +
Sbjct: 60  QGTPLLMQLFMVF-----------FGIALFGVDISAWMAAAIALTLFTSAFLAETWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRGQ EA+ +L +T  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 EAIPRGQWEASGSLAMTRLEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              GG + N T +   I  +    Y  L   ++L    L  ++
Sbjct: 169 TKTGGMLANATFEPFLIYGLVAVGYFMLCYPLSLSARYLERRL 211



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 38/106 (35%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +LVG   T  L+    I   + G LV   RLS N ++    + Y+E+F+  P L
Sbjct: 6   WDIVRNLLVGMQWTLLLSLVAFICGGVAGLLVLLARLSDNFVLRGAAKGYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + +F ++  +          +     + L        T      A 
Sbjct: 66  MQLFMVFFGIALFGVDISAWMAAAIALTLFTSAFLAETWRGCVEAI 111


>gi|269139653|ref|YP_003296354.1| glutamine ABC transporter permease component [Edwardsiella tarda
           EIB202]
 gi|267985314|gb|ACY85143.1| glutamine ABC transporter permease component [Edwardsiella tarda
           EIB202]
 gi|304559523|gb|ADM42187.1| Glutamine transport system permease protein GlnP [Edwardsiella
           tarda FL6-60]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R F       + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAFGGWLSNHIALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLRI-------DPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  I +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V++P A+R ++PP
Sbjct: 90  SAAVITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRYVIMPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 210 RLEKRLKI 217


>gi|262277192|ref|ZP_06054985.1| ABC transporter permease component [alpha proteobacterium HIMB114]
 gi|262224295|gb|EEY74754.1| ABC transporter permease component [alpha proteobacterium HIMB114]
          Length = 243

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 105/198 (53%), Gaps = 17/198 (8%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG++++L +   ++           L YI+   +  +  + L+ L   +++  P++   +
Sbjct: 61  LGLIVALPSLSKNKI----------LTYINIGYVEIVRAIPLLVLILWIYYGLPIMTGIS 110

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F         F+S  IALS   +AF AEI R+G+ ++ + Q EA  +LGL   +  RLV+
Sbjct: 111 F-------SPFVSGIIALSISESAFQAEIFRAGINSIKKSQWEAGSSLGLNFYRILRLVI 163

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+++I+P + +Q++ +LK SSL   +G  DL      ++  T + +EI    +  YL
Sbjct: 164 LPQAIKNILPAIGNQFVYVLKMSSLVSIIGIGDLTRKANELVVTTYRPLEIYTFLILEYL 223

Query: 376 SLSIMIALFMNRLNAKIA 393
            L ++++ F+ +   ++ 
Sbjct: 224 ILILIVSYFVRKFEKRLK 241



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 42/81 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L G   T +++ + +I +  +G +V    LS NK++ +I   YVE+ R IP LV
Sbjct: 35  TNLKFLLSGLSTTIFISVASIIISIFLGLIVALPSLSKNKILTYINIGYVEIVRAIPLLV 94

Query: 144 VIFFLYKSVLSVLPIPDHSIV 164
           +I ++Y  +  +  I     V
Sbjct: 95  LILWIYYGLPIMTGISFSPFV 115


>gi|213052557|ref|ZP_03345435.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 232

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 96/223 (43%), Gaps = 8/223 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++ +    +   +T+       V   +L ++L++     ++             ++ T++
Sbjct: 10  LWTDGYRFTGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIRFPI-------WLFTYI 62

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI    
Sbjct: 63  FRGTPLYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      D
Sbjct: 122 IRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+ +   I + T Q      I   +YL +S ++     R   +
Sbjct: 182 LLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERR 224


>gi|16761277|ref|NP_456894.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765679|ref|NP_461294.1| histidine/lysine/arginine/ornithine transport protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29141027|ref|NP_804369.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56412751|ref|YP_149826.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62180923|ref|YP_217340.1| histidine and lysine/arginine/ornithine ABC transporter [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161612915|ref|YP_001586880.1| hypothetical protein SPAB_00621 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549643|ref|ZP_02343402.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167993039|ref|ZP_02574134.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168229727|ref|ZP_02654785.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168237376|ref|ZP_02662434.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242476|ref|ZP_02667408.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261626|ref|ZP_02683599.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465939|ref|ZP_02699809.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168817912|ref|ZP_02829912.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194444404|ref|YP_002041615.1| histidine ABC transporter permease protein HisM [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194447914|ref|YP_002046407.1| histidine ABC transporter permease HisM [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194470447|ref|ZP_03076431.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194735740|ref|YP_002115422.1| histidine ABC transporter permease HisM [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251061|ref|YP_002147312.1| histidine ABC transporter permease HisM [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197361685|ref|YP_002141321.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|200389110|ref|ZP_03215722.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|207857770|ref|YP_002244421.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213023864|ref|ZP_03338311.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213417109|ref|ZP_03350253.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
 gi|213426992|ref|ZP_03359742.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213581829|ref|ZP_03363655.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213612824|ref|ZP_03370650.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213649620|ref|ZP_03379673.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|224583160|ref|YP_002636958.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238912368|ref|ZP_04656205.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289827473|ref|ZP_06546085.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|61225731|sp|P0A2I7|HISM_SALTY RecName: Full=Histidine transport system permease protein hisM
 gi|61225732|sp|P0A2I8|HISM_SALTI RecName: Full=Histidine transport system permease protein hisM
 gi|25296628|pir||AF0800 histidine transport system permease STY2582 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|154127|gb|AAA75580.1| M protein [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|1000516|emb|CAA24661.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16420894|gb|AAL21253.1| histidine and lysine/arginine/ornithine transport protein
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|16503576|emb|CAD07584.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136652|gb|AAO68218.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56127008|gb|AAV76514.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62128556|gb|AAX66259.1| ABC superfamily (membrane),histidine and lysine/arginine/ornithine
           transport protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161362279|gb|ABX66047.1| hypothetical protein SPAB_00621 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403067|gb|ACF63289.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194406218|gb|ACF66437.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194456811|gb|EDX45650.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194711242|gb|ACF90463.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631500|gb|EDX50060.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197093161|emb|CAR58605.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197214764|gb|ACH52161.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197289695|gb|EDY29058.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|199606208|gb|EDZ04753.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|205325332|gb|EDZ13171.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205328839|gb|EDZ15603.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205335889|gb|EDZ22653.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205338649|gb|EDZ25413.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205344787|gb|EDZ31551.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205349394|gb|EDZ36025.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709573|emb|CAR33918.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224467687|gb|ACN45517.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|267994452|gb|ACY89337.1| histidine/lysine/arginine/ornithine transport protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158910|emb|CBW18423.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312913343|dbj|BAJ37317.1| histidine ABC transporter permease protein HisM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320086787|emb|CBY96559.1| Octopine transport system permease protein occM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321222947|gb|EFX48018.1| Histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322715401|gb|EFZ06972.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323130683|gb|ADX18113.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|223499|prf||0809313A protein M
          Length = 235

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 96/223 (43%), Gaps = 8/223 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++ +    +   +T+       V   +L ++L++     ++             ++ T++
Sbjct: 13  LWTDGYRFTGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIRFPI-------WLFTYI 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI    
Sbjct: 66  FRGTPLYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      D
Sbjct: 125 IRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+ +   I + T Q      I   +YL +S ++     R   +
Sbjct: 185 LLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERR 227


>gi|330969252|gb|EGH69318.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 365

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + +V  + +     GL+    +      +      +GIV 
Sbjct: 112 PLFISKFPRKAVYGIAFLVIYPVVAFYLLHGGAFGLTNVPTSQWGGLMLTPVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTPVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +P   +          V+ F        +      +         +  LG   S+ 
Sbjct: 217 LPLFMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKM----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|300718475|ref|YP_003743278.1| Glutamine ABC transporter, permease subunit [Erwinia billingiae
           Eb661]
 gi|299064311|emb|CAX61431.1| Glutamine ABC transporter, permease subunit [Erwinia billingiae
           Eb661]
          Length = 270

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 20/216 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V    +G++L+L     SR       +    LY   F   GLP+++ I L  Q   
Sbjct: 37  LCATVLGTSIGLLLALMGISPSR-----WLRIPARLYTDLF--RGLPSILTILLIGQ--- 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                G   F         +     ALS   +A++ EI R+G+ +V RGQ+EA  ALG++
Sbjct: 87  -----GLARFSYQIFGPSPYPLGIFALSLIASAYMGEIFRAGIQSVERGQLEACRALGMS 141

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           + +A  L+++PQ +R ++P + +Q++ ++K+SSL   +G      +L  VG      TG 
Sbjct: 142 YARAMSLIIIPQGIRRVLPAVVNQFIAIIKDSSLVYLLGLMVNERELFRVGQDAAVLTGN 201

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +++    YL +++ +   +N ++A+     +K
Sbjct: 202 -LSPLMLAGLFYLMITVPMTHLVNYVDARYRTGRRK 236



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 37/82 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G +NT  ++    +  T IG L+    +S ++ +    R+Y ++FR +P ++ I  +
Sbjct: 25  LGTGLINTLIISLCATVLGTSIGLLLALMGISPSRWLRIPARLYTDLFRGLPSILTILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            + +             P G+F
Sbjct: 85  GQGLARFSYQIFGPSPYPLGIF 106


>gi|261420187|ref|YP_003253869.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|297529844|ref|YP_003671119.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. C56-T3]
 gi|319766999|ref|YP_004132500.1| polar amino acid ABC transporter inner membrane protein
           [Geobacillus sp. Y412MC52]
 gi|261376644|gb|ACX79387.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC61]
 gi|297253096|gb|ADI26542.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. C56-T3]
 gi|317111865|gb|ADU94357.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y412MC52]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SFV GI++ +         + K      LL +    I  LP L
Sbjct: 16  LQGFLVTLEVAFISIVLSFVFGIIIGVI-------RYTKIPVLSQLLAVLVETIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F          +  +   AL  + +A ++EIVRSGL ++ +G
Sbjct: 69  LIIFFTY-----------FALPEVGLKLDKLYAAISALVIFESAMLSEIVRSGLQSIDKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +    ++LPQA+R ++PP+ SQ+++LLK++SLA+ +   +L++    
Sbjct: 118 QIEAARSSGLTYVQTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMNHAQI 177

Query: 356 IINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  +     I I ++  F+Y  ++  ++L   RL  +
Sbjct: 178 INGRNVNFVIPIFILVAFMYFIVNYSLSLLSRRLEYR 214



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 72/192 (37%), Gaps = 13/192 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L GF+ T  +AF  ++ + + G ++G  R +   +++ +  V VE  RN+P L++
Sbjct: 11  HLKFLLQGFLVTLEVAFISIVLSFVFGIIIGVIRYTKIPVLSQLLAVLVETIRNLPLLLI 70

Query: 145 IFFLYKSVLSVL---------PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           IFF Y ++  V                        +   GL          A+    ++V
Sbjct: 71  IFFTYFALPEVGLKLDKLYAAISALVIFESAMLSEIVRSGLQSIDKGQIEAARSSGLTYV 130

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLV---LIALKYQLHFDKPVL 251
             +   +    L R       + + LL   S  ++  LP L+    I     ++F  P+ 
Sbjct: 131 QTLWYIILPQALRRMVPPIVSQFISLLKDTSLAIVISLPELMNHAQIINGRNVNFVIPIF 190

Query: 252 GQFNFIGGSTVS 263
               F+      
Sbjct: 191 ILVAFMYFIVNY 202


>gi|198242278|ref|YP_002216424.1| histidine ABC transporter permease HisM [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197936794|gb|ACH74127.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624176|gb|EGE30521.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 235

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++    + R F  K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLISSVVMGGLLAVIL-AVGRVFSNKFIRF--PIWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   + +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     R   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERR 227


>gi|332040836|gb|EGI77208.1| polar amino acid ABC transporter inner membrane protein
           [Hylemonella gracilis ATCC 19624]
          Length = 217

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 11/210 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V S +  I   L    L      +       + +   +  G P L+ + L Y     
Sbjct: 19  WTVVLSLIAFIGGGLVGGLLLVLRLTRLRGVDRAVAVYVQVFQGTPLLMQLFLTY----- 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 F F      +  + +  +AL+ YT+AF+ EI R  + A+P+GQ EAA +L ++ 
Sbjct: 74  ------FGFALLGLQTSPWTAAGLALTLYTSAFLTEIWRGCVAAIPKGQWEAAQSLAMSF 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+LPQA+R  IPP     + ++K ++LA  +GF +L   G  I N T Q   + 
Sbjct: 128 TEQLRHVILPQALRIAIPPTVGFLVQVVKGTALASVIGFVELTRAGNMISNVTYQPFTVF 187

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +Y +L   I+L+   L  K+    +
Sbjct: 188 ACVALLYFALCWPISLYAQTLERKLHASRR 217


>gi|311695924|gb|ADP98797.1| amino acid ABC transporter, inner membrane subunit [marine
           bacterium HP15]
          Length = 240

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 94/228 (41%), Gaps = 5/228 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 +      M T   +   S V+G+++++    L    +         +++ T+L 
Sbjct: 14  IFTAMTIMEYWDGMVTTVHLVFLSLVIGLLVAVPLAILRTVRNPFVSGP---VWLYTYLF 70

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + Y        + +  +         F    +A +  TAA+  EI+R  +
Sbjct: 71  RGTPLLIQLYIIYYGLAQIEGIQETFW--WEIFREPFYPALLAFTLNTAAYTTEIIRGAI 128

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           I+ P G++EAA A G+      R ++LP A R  +   +++ + +L  S++A  V   DL
Sbjct: 129 ISTPNGEIEAAKAYGMNWFMRMRRIVLPSAARRAVQAYSNEVIFMLHASAIASVVTIVDL 188

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I ++     +  +     Y++L+ ++     +L   +   ++
Sbjct: 189 TGAARNIYSRFYAPFDAFIFVALCYMALTFILVFAFRKLETHLLKHQR 236



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 39/107 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G V T  L F  ++   ++   +   R   N  V+    +Y  +FR  P L+ ++ +
Sbjct: 23  YWDGMVTTVHLVFLSLVIGLLVAVPLAILRTVRNPFVSGPVWLYTYLFRGTPLLIQLYII 82

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           Y  +  +  I +      F        L+F   T     +I   + +
Sbjct: 83  YYGLAQIEGIQETFWWEIFREPFYPALLAFTLNTAAYTTEIIRGAII 129


>gi|312883552|ref|ZP_07743277.1| ABC transporter permease [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368775|gb|EFP96302.1| ABC transporter permease [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 225

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 92/228 (40%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + + +  +    L              LG+ + L   R S H+           + 
Sbjct: 1   MDFSLIIESMPIYLDGLWTTVWLVGLALVVGLGVAIPLAVARNSEHYFL-----FGPSWA 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +   G P LV + L Y        + QF  +  +     +    +A    T+A+ AEI
Sbjct: 56  FIYFFRGTPLLVQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  +P+G++EAA A G+      + ++LP A+R  +P  +++ + +L  S++A  V
Sbjct: 110 IRGAINGLPQGEVEAAKAYGMGSFMTYKRIILPSALRRALPAYSNEVIFMLHGSAVAGIV 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              DL      + ++     E  L     Y++L+ +I         ++
Sbjct: 170 TIMDLTGAARLVNSRYYAPFESFLTAGLFYMALTFIILGCFKLAEKRL 217



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T WL    ++    +   +   R S +  +      ++  FR  P LV ++ +
Sbjct: 13  YLDGLWTTVWLVGLALVVGLGVAIPLAVARNSEHYFLFGPSWAFIYFFRGTPLLVQLYLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  +    P+ D      +   L    L+    T +      
Sbjct: 73  YYGMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIRGAI 114


>gi|257870153|ref|ZP_05649806.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804317|gb|EEV33139.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 223

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 24/231 (10%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR--------HFHEKTGKALPLL 222
           +    L  P +       +   S+ LGI ++ F    +                + +   
Sbjct: 1   MYIPTLDLPLMWESLPFLLTGLSYTLGIAIASFLAGNALGLLLTFLGMLQNPWVRRIVRG 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS   + G+P LVL+ L Y               G     P   +  I  S  ++AFI 
Sbjct: 61  YISF--LRGVPALVLLFLLY--------------FGLPYQLPALTAAIICFSLTSSAFIG 104

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  +  V RGQ +AA ALGL+  K  RL++LPQA R  +P L++  ++LLK +SLA 
Sbjct: 105 EIYRGSIAGVDRGQWDAAYALGLSFSKTLRLIILPQAFRISVPALSNVAMDLLKGTSLAA 164

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   D+      +  +T   + + ++   IY  L I I    +RL  + A
Sbjct: 165 MITIPDIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCIGIEALQHRLEKRFA 215


>gi|251790087|ref|YP_003004808.1| glutamine ABC transporter permease protein [Dickeya zeae Ech1591]
 gi|247538708|gb|ACT07329.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 219

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P +V +   Y   F  P+L        S     F
Sbjct: 42  FARVYGGGLSNRIALVFIE--IIRGTPIVVQVMFIY---FALPMLLT------SVRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 91  SAAVVTIMINSGAYIAEITRGSVLSIHKGFTEAGLALGLSRRDTLRHVIAPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ +++ + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLVITLALSMVLR 210

Query: 387 RLNAKIAL 394
            L  ++ +
Sbjct: 211 WLERRLKI 218


>gi|49081960|gb|AAT50380.1| PA5154 [synthetic construct]
          Length = 232

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 2/200 (1%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            + V   +L      +++       + L   Y  T ++ G+P  + + + Y         
Sbjct: 24  LAAVCVGLLLGLLGAIAKTSKYAALRFLGGTY--TTIVRGVPETLWVLMIYFGTVSGLNA 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F         F +  +AL     A+  E+ R  L+++PRG  EA  ALGL+  +  
Sbjct: 82  LGDLFGKPDLALSPFAAGTLALGLCFGAYATEVFRGALLSIPRGHREAGQALGLSPGRIF 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQ  R  +P L + YL LLK+++L   +   +++       N T +     +   
Sbjct: 142 WRIVLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFTFYMTAA 201

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            IYLSL+++I + ++ L  +
Sbjct: 202 AIYLSLTVVIMVALHFLERR 221


>gi|220932712|ref|YP_002509620.1| polar amino acid ABC transporter, inner membrane subunit
           [Halothermothrix orenii H 168]
 gi|219994022|gb|ACL70625.1| polar amino acid ABC transporter, inner membrane subunit
           [Halothermothrix orenii H 168]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 108/210 (51%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +LG+++++           +      + ++ +     + ++ LI + + +
Sbjct: 14  VTIELTILSLILGLIVAVPLA------FGQIYGNFAIKFLVSIYERVVRSIPLIVILFLV 67

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H+  P +              F++  + L   +AA+ ++I R  + ++  GQM+AA++LG
Sbjct: 68  HYGLPRV--------GIRLTFFVASVVGLGLRSAAYQSQIFRGAIQSIDNGQMKAALSLG 119

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A   V+LPQA+R II P T+++  +LK+SSLA A+G  +L+  G  II+ + + +
Sbjct: 120 MSKLQAFVTVILPQAIRLIIGPWTNEFTIVLKDSSLAYALGVVELLRQGRYIISTSNKPM 179

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + L    IY  L+I++         K+++
Sbjct: 180 PVFLTVAAIYFILTIIVNSIFRYTERKLSI 209



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 37/81 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L    +I   I+   +  G++  N  + ++  +Y  V R+IP +V++F +
Sbjct: 8   LLEGTLVTIELTILSLILGLIVAVPLAFGQIYGNFAIKFLVSIYERVVRSIPLIVILFLV 67

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           +  +  V       +    G+
Sbjct: 68  HYGLPRVGIRLTFFVASVVGL 88


>gi|331017446|gb|EGH97502.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 229

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVVRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L      +++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGVYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++ +  L +  L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSVSLLALRYLEKRYSVGVR 225



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 11/117 (9%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           I  ++     +L      +     + L+              A I    F+ G+ LS
Sbjct: 65  ILLIFYGGQDLLNRVAPLLGFDDYIDLDP-----------LLAGICTLGFIFGVYLS 110


>gi|329911825|ref|ZP_08275609.1| ABC-type amino acid transport system, permease component
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327545793|gb|EGF30920.1| ABC-type amino acid transport system, permease component
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 219

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 13/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +F  + ++G +L      ++R    +  +    +Y+S  LI G P LV + L Y  
Sbjct: 19  LYTVLFALASMVGGLLLGALLAMARLQPWRVLQWPAAVYVS--LIRGTPLLVQVFLIYY- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  +ALS    AF++E +R  +  V  GQ  A+ +LG
Sbjct: 76  ----------GLPSIGIEFSPVSAGILALSLNAGAFLSESLRGAVQGVSAGQWSASYSLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R V+ PQA+R  +P + +  ++L+K++SL   +   +L+     +I  T + +
Sbjct: 126 LTWVQTLRFVVAPQALRIAVPSMGNTLISLIKDTSLVSVITVTELMLATKEVIATTFRPL 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + +    +Y  LS++  +   RL  ++    ++
Sbjct: 186 PLYVTAALLYWCLSMLFEVVQRRLEKRLQRAHQQ 219


>gi|237731568|ref|ZP_04562049.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
 gi|226907107|gb|EEH93025.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
          Length = 308

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +  ++ +F L   + SV   P     +    F +   LS    T+       + S V
Sbjct: 16  MRTVGAVIALFALAVILQSVAFNPRWEWSVFARWFFDPVILSGLGQTLLLTLIGTLLSIV 75

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
           +G +L+L     +R         L   YI  F    L  ++++   +   +D   +    
Sbjct: 76  IGGLLAL-----ARLSSSWLLNGLAWGYIWLFRSLPLIVVLIVLYNFSYLYDTLTIGIPF 130

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q+       V  +F +  + L+   +A+ AEI+R G + V  GQ EAA ALGL   +
Sbjct: 131 TPIQWGSFETINVLGQFSTAVVGLTLVQSAYTAEIIRGGFLGVDHGQYEAAAALGLPAGR 190

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            T  ++LPQA+R+I+P   ++ ++L K +++   +   +L      I N+T + I ++++
Sbjct: 191 RTLRIILPQALRTILPAGFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRTQEVIPLLMV 250

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ +++L  + +   +A  E++
Sbjct: 251 GAVWYLVITSVLSLIQHLVERALARSERR 279



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 28/44 (63%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           + +IG L+   RLS++ L+  +   Y+ +FR++P +VV+  LY 
Sbjct: 73  SIVIGGLLALARLSSSWLLNGLAWGYIWLFRSLPLIVVLIVLYN 116


>gi|302550658|ref|ZP_07303000.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468276|gb|EFL31369.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
          Length = 300

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 16/258 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGI 198
           LV    LY  V++    P          +                  + V      VLG+
Sbjct: 50  LVTGAVLYLVVVNAPGWPRTKETFFDWGYAREAFPKVLEGLWLNVRLLLVCGAAVLVLGM 109

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           ++++  T     F     +AL   Y   F   GLP ++ + +   +    P L     + 
Sbjct: 110 LIAIARTLRGPVFF--PLRALAAAYTDFF--RGLPLIINLMI---VVLGVPALR----LQ 158

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G TV P  +    AL+   +A++AE+ R+G+ +V   Q  AA +LGL++R+A R V+LPQ
Sbjct: 159 GVTVDPVLLGGT-ALTLTYSAYVAEVFRAGIESVHPSQRAAARSLGLSNRQALRYVVLPQ 217

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  +PPL +  ++L K++ L    G  D V     I+ ++       ++   ++++L+
Sbjct: 218 AVRRQVPPLLNDLVSLQKDTGLVSIGGAVDAVRAADIIVGRSLNYTP-YIVAGLVFVALT 276

Query: 379 IMIALFMNRLNAKIALKE 396
           I +  F + + A++  + 
Sbjct: 277 IPMTRFTDWVTARMDRRR 294


>gi|170738364|ref|YP_001779624.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820552|gb|ACA95134.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     +      L    +T++  A  FV S VLG++L+L           K      + 
Sbjct: 1   MFFQNAIDFLPILLKGAVVTIEITACAFVLSSVLGLILALM----------KVSHNRAVA 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              + ++  +  L +I   + ++F  P L                +  + L    +A+ A
Sbjct: 51  TAGSTIVNVIRGLPIIVQLFYMYFVLPDL--------GVQLSALQAGVLGLGIAYSAYQA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ A+ RGQ+EAA A+G+      R V+LPQA R  +PP  +  + LLK+SS+A 
Sbjct: 103 ENFRAGIEAIDRGQIEAAHAIGMRGPMIMRRVVLPQAFRIALPPYGNTLVMLLKDSSVAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  A++   G  I + T Q + +  +   +YL+L + +   +NRL  ++AL+ 
Sbjct: 163 TITVAEITRAGQLIASSTFQNMSVYTLVALLYLALGLSLMFAVNRLGKRLALRR 216


>gi|121604974|ref|YP_982303.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593943|gb|ABM37382.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FLN   L F    +     + V +F+ G +L  FA  L R +  +  +    LYI     
Sbjct: 3   FLNLAHLKFLFDGLLWTVGLSVLAFIGGGLLG-FAVALGRLYGWRATRTAVSLYIKLIQG 61

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             L  L+ +A     +F  P L                +  +ALS Y +A++ EI R  +
Sbjct: 62  LPLLVLLPLA-----YFGLPSL--------GINVSPLAAAALALSIYVSAYLGEIWRGCI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +VPR Q EAA  LGL   +    V+LPQA++   PP     + ++KN+SLA A+GF +L
Sbjct: 109 ESVPRTQFEAAECLGLRWHQQLLHVILPQAVKIATPPTVGFMVQIVKNTSLASAIGFVEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  I N T +   I +I   +Y +L   ++L   RL     +  +
Sbjct: 169 ARAGQIINNSTFEPFVIFVIVAALYFALCYPLSLLSRRLERSFNVANR 216


>gi|319784006|ref|YP_004143482.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169894|gb|ADV13432.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 215

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 13/180 (7%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + +  +Y+S F   G P L+ +   + L+F  P +       G  + P F +  I L 
Sbjct: 48  ILRTIGTVYVSLF--RGTPCLIQL---FVLYFGGPQI-------GINLEP-FAAGVIGLG 94

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A++AE +R  L+AV RGQ EAA  +G +  +  R V+LPQA R +I PL    + L
Sbjct: 95  LNIGAYMAESIRGALVAVDRGQTEAARTIGFSRFQTLRKVVLPQAARLMIRPLGVNTVAL 154

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK S+L   +   +L       I  T +  EI  +   +Y+ +   +A  ++ L+ + A+
Sbjct: 155 LKGSALVSTISVVELTYTAQRFIGSTYKPFEIFGVAALLYMIMVYAVARVVDLLDKRFAI 214


>gi|301169917|emb|CBW29521.1| arginine transporter subunit [Haemophilus influenzae 10810]
          Length = 221

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F     A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVFA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSTQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMHQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|299067959|emb|CBJ39173.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Ralstonia solanacearum CMR15]
          Length = 242

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 4/233 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +  V       N   L +    +     + + S+++ +VL      L R    K    
Sbjct: 4   HWNWGVFFTEAAQNQTYLDWLLSGLKITIALGLSSWIIALVLGSVLGVL-RTVPSKALSG 62

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   Y+  F    +P +V + + Y +  +  V G       +  +  F+   + L  +TA
Sbjct: 63  LATAYVELF--RNIPLIVQLFIWYFVMPEL-VPGGDYIKQMNPATAMFLCAMLCLGTFTA 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP A R I+PPLTS++LN+ KNS
Sbjct: 120 ARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M  + A+
Sbjct: 180 AVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEAR 232



 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 45/86 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A ++G+++G  R   +K ++ +   YVE+FRNIP
Sbjct: 16  QNQTYLDWLLSGLKITIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAYVELFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            +V +F  Y  +  ++P  D+   + 
Sbjct: 76  LIVQLFIWYFVMPELVPGGDYIKQMN 101


>gi|254465341|ref|ZP_05078752.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium Y4I]
 gi|206686249|gb|EDZ46731.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium Y4I]
          Length = 224

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 10/184 (5%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R         L +L+IS F   G P LV + L Y   F  P L     +          +
Sbjct: 45  RVIKVPVLDRLVVLFISFF--RGTPLLVQLFLFY---FGLPQL-----LPALANINGVTA 94

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ + AA++AE +R+ +  V R Q EAA ++G+T  +  R ++LPQA R   P L 
Sbjct: 95  AIMGLTLHFAAYMAESIRAAIAGVDRSQWEAAQSIGMTQAQMMRRIILPQAARIAAPTLV 154

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++++K +SLA  +G  +++         +    E  L+   IY  +   ++    RL
Sbjct: 155 NYFIDMIKGTSLAFTLGVTEMMGAAQKEAAGSFLYFEAFLVVAVIYWIMVEALSQVQGRL 214

Query: 389 NAKI 392
             ++
Sbjct: 215 ETRL 218


>gi|307727665|ref|YP_003910878.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588190|gb|ADN61587.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +   ++G  +++     +R  H +  +     Y+  F    +   +L+        
Sbjct: 22  IGVSLTGLLIGFFVAVGVCA-ARLSHNRAARRFGGAYVFFFRGVPMLVQLLLVYYLLPFV 80

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V             P  ++   A+S  +A++IAEI+R G +++P G +EAA  LGL+
Sbjct: 81  GINV-------------PPLVAAISAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L+PQA R  +P L ++ + L+K SSL   VG A+L      I   T + +E 
Sbjct: 128 PFDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEA 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IY  +   +AL  +    ++ 
Sbjct: 188 YVAAGLIYFVICGALALVAHAAEYRLK 214



 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +L   + T  ++ +G++    +   V A RLS N+        YV  FR +P 
Sbjct: 14  LLHAALATIGVSLTGLLIGFFVAVGVCAARLSHNRAARRFGGAYVFFFRGVPM 66


>gi|229522563|ref|ZP_04411979.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229340548|gb|EEO05554.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
          Length = 266

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYTWQWHRVPEYVLIFEDGQWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H   G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSHSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALTLFQGAYTAEVFRGGLNSIAQGQYEAAHSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFAALQMILVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGQ 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSHSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|170724280|ref|YP_001751968.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169762283|gb|ACA75599.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 273

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 18/247 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
            L    I +    L       N  L    LT+       V S +LG   +L     +R  
Sbjct: 45  DLKFSIIVEKFPNLAGFKLGPNGFLQGAALTLFLCLCSMVVSVLLGFAAAL-----ARLS 99

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                  +   Y S F    L          Q+      L Q   + G+       +  I
Sbjct: 100 KSALLFGVASFYTSFFRGTPLLI--------QILLIYLGLPQVGLVPGAI-----AAGII 146

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS    A+++EI R+G+I V  GQ  AA+ALG+        + LPQAMR+IIPP  +Q+
Sbjct: 147 ALSLNYGAYLSEIFRAGIIGVAVGQRHAALALGMRPVAIFWHITLPQAMRTIIPPSANQF 206

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++LK+SSL   +G  +++ +  +    + + +E++     IY  LSI++ L   RL   
Sbjct: 207 ISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWVLSILLELAQARLERH 266

Query: 392 IALKEKK 398
                ++
Sbjct: 267 FGKGYQR 273



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L    M+ + ++G      RLS + L+  +   Y   FR  P L+ I  +
Sbjct: 68  FLQGAALTLFLCLCSMVVSVLLGFAAALARLSKSALLFGVASFYTSFFRGTPLLIQILLI 127

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  V  +P         + LN 
Sbjct: 128 YLGLPQVGLVPGAIAAGIIALSLNY 152


>gi|307308379|ref|ZP_07588084.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306901180|gb|EFN31787.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  FG       L     T+  +     F   LG+ ++L      R  +    + L   
Sbjct: 1   MIREFGFGEFLFLLEGARWTVLLSLLAVTFGGALGLAVAL-----GRTSNWAWMRGLMAT 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P LV + + Y   F  P+LG    I        +M+L + LS +T+AF+ 
Sbjct: 56  YIQIF--QGTPLLVQLFIVY---FGLPLLGLKVDI--------WMALTVGLSLHTSAFLG 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + AVP GQ EAA ALG+ +      V+LPQA R  +P      +NL+K ++LA 
Sbjct: 103 EIWRGSIQAVPPGQSEAARALGIGYVHRMIDVVLPQAFRIALPATIGFLVNLIKGTALAA 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G  +L   G  + N T Q ++       +Y  + + +  F  R+  ++    
Sbjct: 163 LLGLTELTRSGQLMANITFQPLQAYGAVGLVYFFICLPLTTFSARIERRLNAAR 216



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+   +     +G  V  GR S    +  +   Y+++F+  P LV +F +
Sbjct: 13  LLEGARWTVLLSLLAVTFGGALGLAVALGRTSNWAWMRGLMATYIQIFQGTPLLVQLFIV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +    D  + L  G+ L+              A
Sbjct: 73  YFGLPLLGLKVDIWMALTVGLSLHTSAFLGEIWRGSIQA 111


>gi|300693654|ref|YP_003749627.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
 gi|299075691|emb|CBJ34988.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
          Length = 233

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 9/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L    +T+      +V + VL  VL       S       G  +           
Sbjct: 15  FSRMLLEGVWMTLVIAGSSWVLAMVLAFVLLAIRMAPSPIAEHFVGSYVS-------YHC 67

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +PTLV +   Y        L   +++G       F    +ALS   AA+ +E +RSGL 
Sbjct: 68  NVPTLVQLMFWYFGISTLFPLPVLDWLGEHHSEALF--AIVALSLCQAAYFSEDLRSGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA ALG +   A R VL+PQA+R+ +P L +  ++L KNSSLA+A+G A++ 
Sbjct: 126 AIPPGQEEAARALGNSFIGAMRHVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVAEMT 185

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                I N + +A E  L+   +YL  S++I      L  +  +   +
Sbjct: 186 HAVKEIENASFRAFESYLLATVMYLGFSLVIMAVGACLARRFRVVTGR 233



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 40/91 (43%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
              ++    +  ++  +L G   T  +A S  + A ++  ++ A R++ + +       Y
Sbjct: 3   GFDLMAILKNPEFSRMLLEGVWMTLVIAGSSWVLAMVLAFVLLAIRMAPSPIAEHFVGSY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           V    N+P LV + F Y  + ++ P+P    
Sbjct: 63  VSYHCNVPTLVQLMFWYFGISTLFPLPVLDW 93


>gi|296272602|ref|YP_003655233.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096776|gb|ADG92726.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                L       + + +F+ G +++     L R  + +    L  +Y+  F   G P L
Sbjct: 10  FHNLLLATRWTLLLSLIAFIGGGIVAGILILL-RMTNNRFLSILIKIYVEIF--QGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L +           F          E+ +  +AL+ +T+AF+ EI    L +VP+G
Sbjct: 67  MQLYLAF-----------FGLSLIGIDINEWTAASLALTLFTSAFLCEIWSGCLNSVPKG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  +GL + ++   V++PQ +R    P     + ++K ++LA  +GF +L   G  
Sbjct: 116 QWEAAKTMGLNYYQSMIHVIIPQTIRVATAPTIGFSVQVVKGTALASIIGFIELTKAGTM 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + N T +  ++  +   IY  +   +  +   L  K+ + 
Sbjct: 176 LNNATFEPFKVFTMVAIIYFVICYPLTRYSKYLERKLNVS 215


>gi|238920485|ref|YP_002934000.1| glutamine ABC transporter permease protein [Edwardsiella ictaluri
           93-146]
 gi|238870054|gb|ACR69765.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R F       + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAFGGWLSNHIALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLRI-------DPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  I +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V++P A+R ++PP
Sbjct: 90  SAAIITIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRHVIMPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 210 RLERRLKI 217


>gi|313497725|gb|ADR59091.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 232

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 13/223 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      + T  K+   S   G++ ++    L R   +        LY  T++I G 
Sbjct: 9   WEALPMYFGGLLTTLKLLAISLFFGLLAAIPLG-LMRVSRQPVINLAAWLY--TYVIRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF  +  S   P          +A    T+A+ AEI+   
Sbjct: 66  PMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGS 119

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +SLA  V   D
Sbjct: 120 LKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLID 179

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +     T+  Q     E  +     YL L+ ++         +
Sbjct: 180 ITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAERR 222


>gi|229593272|ref|YP_002875391.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229365138|emb|CAY53377.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +      +     + + +FV G V+ L    + R   +   + +   YI  F  
Sbjct: 4   FSFWDIVRNLATGLQWTLLLSLVAFVGGGVIGLLVMTM-RISRKAFPRNVARTYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           +++  IAL+ +T+A++AEI R  +
Sbjct: 61  QGTPVLMQLFLVF-----------FGIALLGVDISPWLAAAIALTLFTSAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++  GQ EA+ +L L   +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 110 DSIAHGQWEASASLALNPLEQLRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              GG + N T +   +  +    Y  L   ++L    L  ++
Sbjct: 170 TKTGGMLANATFEPFMVYGLVALGYFLLCYPLSLSARYLERRL 212



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 36/107 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +  G   T  L+    +   +IG LV   R+S       + R Y+E+F+  P L
Sbjct: 7   WDIVRNLATGLQWTLLLSLVAFVGGGVIGLLVMTMRISRKAFPRNVARTYIELFQGTPVL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  +  +       +     + L              ++  
Sbjct: 67  MQLFLVFFGIALLGVDISPWLAAAIALTLFTSAYLAEIWRGCVDSIA 113


>gi|220922366|ref|YP_002497668.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219946973|gb|ACL57365.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 217

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 14/211 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S V+   L L    + R         L   +I+  +I G+P +V +   Y 
Sbjct: 20  QLTILITVGSLVVSTALGLV-WAMMRVSGIPLLSGLSATFIN--VIRGIPIIVQLFYIY- 75

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F             +  + L    +A+ AE  R+ + A+ +GQ+EAA  +
Sbjct: 76  ----------FVLPDFGIALTAVQAGVLGLGLAYSAYQAENFRAAIEAIDKGQIEAAQTI 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      R V+LPQA+R  +PP  +  + +LK+SS A  +  A+L   G  I + T + 
Sbjct: 126 GMGWGLTMRRVVLPQALRIALPPYGNVMIMMLKDSSQASTITVAELALQGKLIASATFKN 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  +   +YL+LS+ + L +     +   
Sbjct: 186 TSVFTLVALMYLTLSLPLILIVRHFEKRTGR 216



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 37/100 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +T +G +    R+S   L++ +   ++ V R IP +V +F++
Sbjct: 15  LLQGVQLTILITVGSLVVSTALGLVWAMMRVSGIPLLSGLSATFINVIRGIPIIVQLFYI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +               G+ L               A 
Sbjct: 75  YFVLPDFGIALTAVQAGVLGLGLAYSAYQAENFRAAIEAI 114


>gi|282857095|ref|ZP_06266341.1| L-cystine transport system permease protein TcyB [Pyramidobacter
           piscolens W5455]
 gi|282585030|gb|EFB90352.1| L-cystine transport system permease protein TcyB [Pyramidobacter
           piscolens W5455]
          Length = 254

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 15/246 (6%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
             +V              + + +     S    T+       +F+ +LG VL+      S
Sbjct: 17  ILAVYRKEGKARMVFQFDYFLRMFTIIFSGFKNTVSMAFVSLIFAVLLGFVLA-----AS 71

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R+++    K   +++ S F     P +  + + Y                       F +
Sbjct: 72  RYYNIPVLKQFSVVFTSFF--RSTPFIAQLFVFYYGFAQISA--------AVRGLSSFWA 121

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + I LS   AA++ E +R  + +V +GQ EA I++G+T  +  R +++PQA R  +P + 
Sbjct: 122 VVIVLSLSFAAYMGENIRGAISSVDKGQFEAGISIGMTPWQTIRRIVIPQAARVAVPGMV 181

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + + NL K++SLA  VG  D+ S     +N T + +E  +  + IY  +  +++   + L
Sbjct: 182 NSFANLFKSTSLAFTVGVMDMTSCAKNEVNLTYRYLEGFIALLIIYWVILALVSYAQSLL 241

Query: 389 NAKIAL 394
              +  
Sbjct: 242 ERYMNR 247



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 2/128 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T I  GF NT  +AF  +I A ++G ++ A R     ++     V+   FR+ P +  +
Sbjct: 40  FTIIFSGFKNTVSMAFVSLIFAVLLGFVLAASRYYNIPVLKQFSVVFTSFFRSTPFIAQL 99

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--FSFVLGIVLSLF 203
           F  Y     +             + + +   +         A   V    F  GI + + 
Sbjct: 100 FVFYYGFAQISAAVRGLSSFWAVVIVLSLSFAAYMGENIRGAISSVDKGQFEAGISIGMT 159

Query: 204 ATRLSRHF 211
             +  R  
Sbjct: 160 PWQTIRRI 167


>gi|170735823|ref|YP_001777083.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169818011|gb|ACA92593.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 11/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LI 229
            +   +      +    ++ VF  +LG+V       ++  F     KA+ +L      LI
Sbjct: 3   FDWSAIWAALPDLMDGVRLTVFIALLGLVGGFIVGMIAGMFRAYGPKAMNVLAQVYIELI 62

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P +V +     L+F  P+L      G         +  IA++  + A++AE+VR  L
Sbjct: 63  RGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIIAITVNSGAYLAEVVRGAL 112

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++P+G  EA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +G  +L
Sbjct: 113 LSIPKGLTEAGLAMGLSMPRVLLKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVGEL 172

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              G  II    QA+EI      IYL L+  + L +  +  ++ +
Sbjct: 173 TRKGQEIIAGNFQAVEIWSAVAVIYLILTGAMTLTLRIVEKRMRI 217


>gi|28872359|ref|NP_794978.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855614|gb|AAO58673.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 215

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++ L    + R   +   +    LYI  F  
Sbjct: 3   FTLWDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVM-RTSEKTGPRVAAKLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +L +T  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESISKGQWEASASLAMTPLEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHLERRL 211



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG LV   R S         ++Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVMRTSEKTGPRVAAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|260771045|ref|ZP_05879973.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|260613934|gb|EEX39125.1| amino acid ABC transporter permease protein [Vibrio furnissii CIP
           102972]
 gi|315178628|gb|ADT85542.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 223

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 113/231 (48%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L + + TM+       F+ +L ++L+       R F      AL  L
Sbjct: 3   FDFQYMLGLMPILLKYLSTTMEMAVWGMFFALILSVLLANI-----RVFKVPVLNALSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P+L   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQMFLLYYGLPQIFPLLIGID---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA
Sbjct: 107 AETIRAAIIGIDRSQMEASLSVGMTTGQAMRRIILPQASRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G A++++      + + +  E  L    IY ++ +++         K+
Sbjct: 167 FTFGVAEIMAKAQMEASSSFRFFEAFLAVALIYWAVVMVLTRVQIWAENKL 217



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 33/69 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  GM  A I+  L+   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLSTTMEMAVWGMFFALILSVLLANIRVFKVPVLNALSQLYISFFRGTPLLVQMFLL 74

Query: 149 YKSVLSVLP 157
           Y  +  + P
Sbjct: 75  YYGLPQIFP 83


>gi|66044226|ref|YP_234067.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254933|gb|AAY36029.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 280

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 72  GFLQGAALTLFVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 131

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 132 IYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPTQIF 191

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 192 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 251

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 252 VLYWIMSIGLELLQSRLERHYG 273


>gi|152988488|ref|YP_001351210.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|254243965|ref|ZP_04937287.1| hypothetical protein PA2G_04795 [Pseudomonas aeruginosa 2192]
 gi|296392008|ref|ZP_06881483.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|126197343|gb|EAZ61406.1| hypothetical protein PA2G_04795 [Pseudomonas aeruginosa 2192]
 gi|150963646|gb|ABR85671.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 231

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 2/200 (1%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            + V   +L      +++       + L   Y +          VL+ + +        L
Sbjct: 24  LAAVCVGLLLGLLGAIAKTSKYAALRFLGGTYTTIVRGVPETLWVLM-IYFGTVSGLNAL 82

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
           G         +SP F +  +AL     A+  E+ R  L+++PRG  EA  ALGL+  +  
Sbjct: 83  GDLFGKPDLALSP-FAAGTLALGLCFGAYATEVFRGALLSIPRGHREAGQALGLSPGRIF 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQ  R  +P L + YL LLK+++L   +   +++       N T +     +   
Sbjct: 142 WRIVLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFTFYMTAA 201

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            IYLSL+++I + ++ L  +
Sbjct: 202 AIYLSLTVVIMVALHFLERR 221


>gi|330502657|ref|YP_004379526.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328916943|gb|AEB57774.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 232

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 13/220 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +    K+ + +  +G++L++    + R   +K       LY  T++I G P L
Sbjct: 12  LPLYFGGVLVTLKLLLIALAVGLLLAVPL-AIMRVSRQKLINFPAWLY--TYVIRGTPML 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSGLIA 291
           V + L Y        L QF  +  + + P          +A +  T+A+ AEI+   L A
Sbjct: 69  VQLYLLYY------GLAQFEAVRETFMWPYLSSATFCACLAFAINTSAYTAEILAGSLKA 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            P G++EAA A+G++ RK  + +LLP A+R  +P  +++ + +L  +SLA AV   D+  
Sbjct: 123 TPPGEIEAAKAMGMSRRKLYQRILLPSALRRALPQYSNEVIMMLHTTSLASAVTLVDITG 182

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T+ +Q     E  +     YL+L+ ++         +
Sbjct: 183 AAKTLSSQYYMPFEAYVTAGLFYLALTFILVRLFKLAERR 222



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L    +    ++   +   R+S  KL+ +   +Y  V R  P LV ++ LY  
Sbjct: 18  GVLVTLKLLLIALAVGLLLAVPLAIMRVSRQKLINFPAWLYTYVIRGTPMLVQLYLLYYG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +     + +  +            L+F   T    A+I   S 
Sbjct: 78  LAQFEAVRETFMWPYLSSATFCACLAFAINTSAYTAEILAGSL 120


>gi|317492512|ref|ZP_07950940.1| His/Glu/Gln/Arg/opine family amino ABC transporter
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919504|gb|EFV40835.1| His/Glu/Gln/Arg/opine family amino ABC transporter
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 222

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 8/188 (4%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   LI G P +V +   Y   F  P++ Q             
Sbjct: 42  FARAYGGWLSNHIALVFIE--LIRGTPIVVQVMFIY---FALPMMLQAF---MQVRIDPL 93

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V++P A+R ++PP
Sbjct: 94  TAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIMPLALRRMLPP 153

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 154 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSYVLR 213

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 214 RLERRLKI 221


>gi|229844866|ref|ZP_04465004.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           6P18H1]
 gi|229812247|gb|EEP47938.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           6P18H1]
          Length = 221

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV +     + F                   F     A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEMLTGEYIEFG-----------------AFGCGVFA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPTGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     I   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLMRQADLINTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|262191874|ref|ZP_06050043.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|262032239|gb|EEY50808.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
          Length = 265

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 34  MGYQWQWHRVPEYVLIFEDGEWWTGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 88

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 89  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 134

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 135 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 194

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 195 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 254

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 255 EHKLGAQWR 263



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 6   FRPLLFAALQMILVFAGLVWLLDSGAQAM-------GYQWQWHR----VPEYVLIFEDGE 54

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 55  WWTGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 114

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 115 QIYLLYFVF 123


>gi|218886663|ref|YP_002435984.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757617|gb|ACL08516.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 224

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +    FL +R        +  + K+ V S V G++  +    + R F +   + +   Y 
Sbjct: 1   MFDVDFLVDRVFPSLNAGLWMSVKLIVPSAVFGLLFGVIIG-IVRVFGKPWMQRIANAYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F   G+P LV + + Y           F           + +  +     +AA+ +E 
Sbjct: 60  ALF--RGVPLLVQLFILY-----------FGLPNIGIYLEPYAASVLGFILCSAAYNSEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++ +GQ+ AA ALG +  +    +++PQA+R  +P   ++ + L+K SSLA  +
Sbjct: 107 VRGALLSIRQGQLRAAQALGFSTMQTLVSIVVPQAVRRALPGCGNEIVYLIKYSSLAYVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +L      + ++T +  E+ L+    YL L  + +  +++L  +  +
Sbjct: 167 TCIELTGEAKVLASRTFRFTEVFLVVGAYYLFLVTVASWLLHKLEERFHI 216



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   +  L     +   + G ++G  R+     +  I   Y  +FR +P LV +F LY 
Sbjct: 17  AGLWMSVKLIVPSAVFGLLFGVIIGIVRVFGKPWMQRIANAYTALFRGVPLLVQLFILYF 76

Query: 151 SVLSVLP 157
            + ++  
Sbjct: 77  GLPNIGI 83


>gi|83720841|ref|YP_441773.1| hypothetical protein BTH_I1226 [Burkholderia thailandensis E264]
 gi|167580591|ref|ZP_02373465.1| hypothetical protein BthaT_20718 [Burkholderia thailandensis TXDOH]
 gi|167618698|ref|ZP_02387329.1| hypothetical protein BthaB_20482 [Burkholderia thailandensis Bt4]
 gi|257137941|ref|ZP_05586203.1| hypothetical protein BthaA_01784 [Burkholderia thailandensis E264]
 gi|83654666|gb|ABC38729.1| hypothetical protein BTH_I1226 [Burkholderia thailandensis E264]
          Length = 246

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++V+ +V+      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLAAWVIALVVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    PV            +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVVPELLPVSIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + +K
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMAFMRWVESK 236



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 48/95 (50%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLAAWVIALVVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP+   + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVVPELLPVSIGTWI 101


>gi|310779669|ref|YP_003968002.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
 gi|309748992|gb|ADO83654.1| amino acid ABC transporter membrane protein, PAAT family
           [Ilyobacter polytropus DSM 2926]
          Length = 281

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIA 239
                 I  FS    +V+        R         LP+ Y S F    I G P +V I 
Sbjct: 82  FCITIIISFFSLFCSLVIGTMMAIGQRTT------FLPVYYFSKFYVEFIRGTPLIVQIY 135

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L + +                 ++  ++   + ++ ++ A++AEI+RSG+ ++   Q+E 
Sbjct: 136 LFFYV-----------VGTAFNITDRYIMGILIMASFSGAYVAEIIRSGIESISASQLET 184

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A AL  T  +    ++LPQ ++ I PPL  Q+ +L+K+SSL   +   +       + + 
Sbjct: 185 AKALAFTPFQTYVYIILPQVVKRITPPLAGQFASLIKDSSLLSIIAVNEFTKNVQEVDSL 244

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T   +E   I    YL L+  I+ +   L  K +
Sbjct: 245 TFAPVENYFILAVGYLLLTYPISHYSKYLERKFS 278



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + GF  T  ++F  +  + +IGT++  G+ +    V +  + YVE  R  P +V 
Sbjct: 74  YRYKFIKGFCITIIISFFSLFCSLVIGTMMAIGQRTTFLPVYYFSKFYVEFIRGTPLIVQ 133

Query: 145 IFFLYKSVLSVLPIPDH 161
           I+  +  V +   I D 
Sbjct: 134 IYLFFYVVGTAFNITDR 150


>gi|209527655|ref|ZP_03276153.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
 gi|209491883|gb|EDZ92240.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
          Length = 168

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/159 (33%), Positives = 79/159 (49%)

Query: 8   TVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSER 67
           T      ++    D R   I+ Q+I+ +++  I      N+  N+++S +  G GFL+  
Sbjct: 2   TTNPNQPKIPLWRDDRFWKIAFQVIILVIVIAIISIFTINLNQNLQRSGIRFGFGFLNST 61

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           AGF I + I+PY     Y   +L G VNT  + F G+I  TI+G + G    S N LV  
Sbjct: 62  AGFAIGESIIPYQPTDPYRQVLLAGLVNTLRVMFFGIILTTIVGIVAGISYFSGNWLVRQ 121

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           I  VYVE+ RN P L+ + F Y   L + P+ D   V  
Sbjct: 122 IGLVYVEIVRNTPLLLQLLFWYGIFLQLPPVRDRLGVFN 160


>gi|154686886|ref|YP_001422047.1| GlnP [Bacillus amyloliquefaciens FZB42]
 gi|154352737|gb|ABS74816.1| GlnP [Bacillus amyloliquefaciens FZB42]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 17/230 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L F          + + S VL  +  L A  L      +  K   +  I
Sbjct: 1   MDFSGAYTPDHLLFLWDGFLVTLYVALISIVLSFIFGLAAGTL------RYAKIPIVSGI 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++  +  L L+ + +   F  P +G    I          +   AL+ + +A ++EI
Sbjct: 55  IAAIVETIRNLPLLLIIFFTFFALPEIGIKLEIT--------AAAITALTIFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL +V +GQ+EAA + GLT+ +   LV++PQA+R ++PP+ SQ+++LLK++SLAV +
Sbjct: 107 IRSGLQSVDKGQIEAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L+     +  Q+   G    I L+   +Y +++  ++L   RL A+
Sbjct: 167 ALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYCLSLAARRLEAR 216



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 17/206 (8%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +  GF+ T ++A   ++ + I G   G  R +   +V+ I    VE  RN+P 
Sbjct: 8   TPDHLLFLWDGFLVTLYVALISIVLSFIFGLAAGTLRYAKIPIVSGIIAAIVETIRNLPL 67

Query: 142 LVVIFFLYKSVLS---------VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           L++IFF + ++                           +   GL          A+    
Sbjct: 68  LLIIFFTFFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLQSVDKGQIEAARSSGL 127

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           ++   + L +    L R       + + LL           +L ++    +L  +  +L 
Sbjct: 128 TYTQTLFLVVMPQALRRMVPPIVSQFISLL--------KDTSLAVVIALPELIHNAQILN 179

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTA 278
             +  GG       ++  +  +    
Sbjct: 180 GQSADGGYFFPIFLLAALMYFAVNYC 205


>gi|33592600|ref|NP_880244.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|33572246|emb|CAE41798.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
          Length = 223

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 187 AKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             I V + +LG+++++     L+            L  +    +   P LV +   Y L 
Sbjct: 21  LAITVQATLLGMLVAVTLGLALALLRRSPFWPVSALTALVIEFVRSTPLLVQM---YFLF 77

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  PV                 +  +AL  + AA+ AE+ R+G+ AVPRGQ EAA AL L
Sbjct: 78  YVLPVT--------GWQMSPLTTGILALGLHYAAYCAEVYRAGIEAVPRGQHEAATALNL 129

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    V+LPQA+  ++P L +  + + K++ L  A+   +L+     I + T +  E
Sbjct: 130 SRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKIIGSTTFRYTE 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + +   ++L LS++ A  + RL A++ L 
Sbjct: 190 PLTLVGVLFLLLSLVAAWGVRRLEARLKLY 219


>gi|77405945|ref|ZP_00783025.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77175456|gb|EAO78245.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 133

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/124 (33%), Positives = 69/124 (55%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F      +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+P
Sbjct: 2   FFPAVSCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILP 61

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+T+Q +NL+KN+S    +  AD++ V       T   I         Y  +   +A + 
Sbjct: 62  PMTNQVVNLIKNTSTVAIISGADIMFVAKAWAYDTTNYIPAFAGAAIFYFVICFPLASWA 121

Query: 386 NRLN 389
            +  
Sbjct: 122 RKQE 125


>gi|328463948|gb|EGF35458.1| amino acid ABC transporter, permease protein [Lactobacillus
           helveticus MTCC 5463]
          Length = 215

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 15/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            IF ++ +L   L +    L      K  K L   Y+  +++ G P L
Sbjct: 10  LPALFSGATMTLSIFFWTIILATPLGILV-SLGEMSKIKPIKWLVNFYV--WIMRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V P + +  +A     AA+ AEI R G  ++  G
Sbjct: 67  LQLIFVF---YGLPIIH--------IVFPRYQAALLAFVLNYAAYFAEIFRGGFQSIDEG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L+  +    +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 116 QFEAAKVLHLSRWQTMTKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNV 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + +    +  +++   IYL L  + A  + +L   ++   
Sbjct: 176 AMARD-VTLVPLVLVGVIYLLLISICAFVLKKLEKHVSYYR 215



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+  G   T  + F  +I AT +G LV  G +S  K + W+   YV + R  P L+ 
Sbjct: 9   ILPALFSGATMTLSIFFWTIILATPLGILVSLGEMSKIKPIKWLVNFYVWIMRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F++  +  +  +            LN 
Sbjct: 69  LIFVFYGLPIIHIVFPRYQAALLAFVLNY 97


>gi|294637082|ref|ZP_06715396.1| glutamine ABC transporter, permease protein [Edwardsiella tarda
           ATCC 23685]
 gi|291089710|gb|EFE22271.1| glutamine ABC transporter, permease protein [Edwardsiella tarda
           ATCC 23685]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R F       + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAFGGWLSNHVALVFIE--LIRGTPIVVQVMFIY---FALPMMMPLRI-------DPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V++P A+R ++PP
Sbjct: 90  TAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRDTLRYVIMPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIMTLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 210 RLERRLKI 217


>gi|241205010|ref|YP_002976106.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858900|gb|ACS56567.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 276

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 7/216 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +   S + G +LSL    ++R    +   AL   YI  F   G P L  + L Y 
Sbjct: 67  WITLSLVFISVICGAILSLPL-AVARMSKNRVLNALAYGYIYFF--RGTPLLAQLFLVYY 123

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L   +P L              +     A++  TAA+ AEI+R  + +V  GQ EAA A
Sbjct: 124 GLGIFRPQLEAVGIWW--FFREAWYCGLFAMTINTAAYQAEILRGAIESVSHGQHEAAAA 181

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+    A R ++LPQA+   + P  ++ + L+K S++   +   DL+       ++T  
Sbjct: 182 LGIHKFIAFRKIILPQALIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFD 241

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  L     YL++   +         ++    K+
Sbjct: 242 Y-QTYLWAAIFYLTIVEALRHLWAWFERRLTRHLKR 276



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L F  +I   I+   +   R+S N+++  +   Y+  FR  P L 
Sbjct: 57  RYGPRYLHGLWITLSLVFISVICGAILSLPLAVARMSKNRVLNALAYGYIYFFRGTPLLA 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            +F +Y  +    P  +   +  F       GL   
Sbjct: 117 QLFLVYYGLGIFRPQLEAVGIWWFFREAWYCGLFAM 152


>gi|91225247|ref|ZP_01260415.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269967641|ref|ZP_06181691.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|91189886|gb|EAS76158.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|269827728|gb|EEZ82012.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 246

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ V S +L +VL +    L++    K  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  VTIEVAVLSLILAMVLGMLG-ALAKLAPYKWARAIATLY--TTVIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDKGELEAAKAYGMSSALSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V +       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLDDMVRMSSLAAGTTKMPFTFYMAVALIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   +I A ++G L    +L+  K    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGALVTIEVAVLSLILAMVLGMLGALAKLAPYKWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|309388402|gb|ADO76282.1| amino acid ABC transporter membrane protein, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 220

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 108/228 (47%), Gaps = 11/228 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +        F    ++    I + + + G++++L    +  +   K   +L  +Y+S
Sbjct: 1   MFDINYAINLFPFMIKKLNITLSISLLALIFGLIIALIIAFIC-NCKFKGLYSLAKIYVS 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P +  +   + L+F  P +  F           F    I LS  + A+++E +
Sbjct: 60  FF--RGTPLITQL---FFLYFGLPQIIPFF-----NRVNGFTIAIIGLSLNSGAYMSEAI 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + ++ +GQMEA++++G+++ +A R +++PQA R  IP L + ++N++K ++L   +G
Sbjct: 110 RGAISSIDKGQMEASLSVGMSYFQAMRRIIMPQAARVAIPTLFNSFINIIKGTALTFTIG 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             ++++        + +  E     + IY  +  + +    ++  K++
Sbjct: 170 VTEVMATAKMEGASSYRYFEAFANVIIIYWIVVQLFSFIQQKIEIKMS 217


>gi|197264568|ref|ZP_03164642.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197242823|gb|EDY25443.1| histidine ABC transporter, permease protein HisM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
          Length = 235

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 96/223 (43%), Gaps = 8/223 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++ +    +   +T+       V   +L ++L++     ++             ++ T++
Sbjct: 13  LWTDGYRFTGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIRFPI-------WLFTYI 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI    
Sbjct: 66  FRGTPLYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      D
Sbjct: 125 IRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+ +   I + T Q      I   +YL +S ++     R   +
Sbjct: 185 LLKIARDINSATYQPFTAFGIAAVLYLLISYILISLFRRAERR 227


>gi|327382993|gb|AEA54469.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei LC2W]
 gi|327386181|gb|AEA57655.1| Arginine/histidine ABC superfamily ATP binding cassette transporter
           permease [Lactobacillus casei BD-II]
          Length = 220

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 19/221 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T++ +     FSF+LG++L L      ++F    G          F+I  +
Sbjct: 14  RYLLQGLGVTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVG----------FVIDVI 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + +  +F  P +                +  IA+S + +A +AEIVRSG+ AV
Sbjct: 64  RNLPLLLILFFTYFALPDI--------GIRLNVVAAAIIAMSIFESAMLAEIVRSGINAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA  +   +    
Sbjct: 116 PRGQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYH 175

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I  Q     I + +    +Y  ++  ++L    L+ ++
Sbjct: 176 AQIIYGQNINYMIPMFVALAVMYFVVNYALSLASRWLDRRL 216



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +  + I+G ++G  R    K  + I    ++V RN+P 
Sbjct: 9   SWINLRYLLQGLGVTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDVIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPI 158
           L+++FF Y ++  +   
Sbjct: 69  LLILFFTYFALPDIGIR 85


>gi|299069324|emb|CBJ40590.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CMR15]
          Length = 248

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 10/211 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +   VLGIVL+   + L      +      L  + T L++ +  + L+ L   ++F
Sbjct: 28  IACTLILSVLGIVLAFPLSVL--LALARLSPWSALRSVVTALVYVVRGVPLLMLILWVYF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +  G       F ++   L  Y   +++E+VR+G+ A+P+GQMEAA ALG +
Sbjct: 86  LVPLFIGRDVSG-------FATMLCTLVIYEGVYLSEVVRAGIEALPKGQMEAARALGHS 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIE 365
           +  A R+V+LPQA+ +++P + +Q+++ +K ++L   +   +L      I N    +  +
Sbjct: 139 YLGAMRVVILPQALYNMLPSMLAQFVSTIKETTLGYVINVPELTFAANQINNALLSKPFQ 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I  +   IY ++   +      L  +IA K 
Sbjct: 199 IFFLLAVIYFAVCWSLTRAARALEHRIAAKR 229



 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+  G++ A  +  L+   RLS    +  +    V V R +P L++I ++Y
Sbjct: 25  LGGIACTLILSVLGIVLAFPLSVLLALARLSPWSALRSVVTALVYVVRGVPLLMLILWVY 84

Query: 150 KSVLSV 155
             V   
Sbjct: 85  FLVPLF 90


>gi|188534744|ref|YP_001908541.1| Putative amino acid ABC transporter, permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188029786|emb|CAO97665.1| Putative amino acid ABC transporter, permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 218

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L    L       + V +F  G +++L   RL R         +   Y+  F  
Sbjct: 4   FTDWDILRNLLLAARWTVALSVTAFFGGTLVALPLVRL-RLAGRVWPNRIIRAYVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+CYT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGIDLSPWAAAALALTCYTSAFLVDIWFGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA   LGL+  +    V+LPQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 RALPKGQWEACRCLGLSTGQTLFRVVLPQALRIGIAPTVGFAVQVVKGTALASIIGFIEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 170 TKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSRYSQYLEKKF 212



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 32/107 (29%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +     T++   +   RL+       I R YVE+F+  P 
Sbjct: 6   DWDILRNLLLAARWTVALSVTAFFGGTLVALPLVRLRLAGRVWPNRIIRAYVELFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  V                +                 A 
Sbjct: 66  LMQLFLAFFGVALFGIDLSPWAAAALALTCYTSAFLVDIWFGSIRAL 112


>gi|167034984|ref|YP_001670215.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166861472|gb|ABY99879.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 232

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 13/223 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      + T  K+   S   G++ ++    L R   +        LY  T++I G 
Sbjct: 9   WEALPLYFGGLLTTLKLLAISLFFGLLAAIPLG-LMRVSKQPVVNLAAWLY--TYVIRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF  +  S   P          +A    T+A+ AEI+   
Sbjct: 66  PMLVQLFLIYY------GLAQFEAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGS 119

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +SLA  V   D
Sbjct: 120 LKATPHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLID 179

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +     T+  Q     E  +     YL L+ ++         +
Sbjct: 180 ITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAERR 222


>gi|225386718|ref|ZP_03756482.1| hypothetical protein CLOSTASPAR_00466 [Clostridium asparagiforme
           DSM 15981]
 gi|225047196|gb|EEG57442.1| hypothetical protein CLOSTASPAR_00466 [Clostridium asparagiforme
           DSM 15981]
          Length = 235

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 17/192 (8%)

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
             + +T  +     K  +    +Y+  F     P +V +   Y              IGG
Sbjct: 47  FGMLSTSKA-----KICRFFSRVYVEFF--QNTPLVVQVFFYYN--------CLPYVIGG 91

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P+FM   + +  Y  A+I+E++R+G+ AVP+GQ EAA + G T+ +  R ++LPQ 
Sbjct: 92  RV--PKFMLGVLGVGIYHGAYISEVIRTGIEAVPKGQFEAAYSQGFTYLQTMRYIILPQT 149

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           ++ I+P L +Q LNL+KN+S+   V   DL+    +  +  G   +       +Y  +  
Sbjct: 150 IKLIMPSLANQALNLVKNTSVLAMVAGLDLMYFADSWGSDRGYFAQAYFSCALLYFVICF 209

Query: 380 MIALFMNRLNAK 391
            +A     L A+
Sbjct: 210 PLARLARYLEAR 221



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 41/77 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GF+ T  +A +G++ A ++G + G    S  K+  +  RVYVE F+N P +V +FF 
Sbjct: 22  YIPGFMMTLKVALTGLLLALVLGIIFGMLSTSKAKICRFFSRVYVEFFQNTPLVVQVFFY 81

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  +  V+       +L
Sbjct: 82  YNCLPYVIGGRVPKFML 98


>gi|219871255|ref|YP_002475630.1| arginine transporter permease subunit ArtQ [Haemophilus parasuis
           SH0165]
 gi|219691459|gb|ACL32682.1| arginine transporter permease subunit ArtQ [Haemophilus parasuis
           SH0165]
          Length = 209

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 1/184 (0%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T K   +   +T ++  L  L  I + + ++F  P + +    G       F    +AL
Sbjct: 24  ETHKWTMVRKPTTVVVALLRGLPEILVVFLIYFGAPEVLEM-ITGEYVELGAFGCGVVAL 82

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S   A++ ++ +R  + A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L 
Sbjct: 83  SIIFASYASQSLRGAIQAIPLGQWESGAALGLSRGYTFVNIVMPQVWRHALPGLSNQWLV 142

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK+++L   +G  D++     I   T Q          IYL ++++  + + +L  +  
Sbjct: 143 LLKDTALVSLIGVHDIMRQTELINTSTHQPFTWYGTAALIYLGVTLVSQVIIRKLELRFT 202

Query: 394 LKEK 397
             E+
Sbjct: 203 RFER 206


>gi|303328129|ref|ZP_07358568.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
 gi|302861955|gb|EFL84890.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
          Length = 222

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 102/230 (44%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +F ++  L      +  +  + + +  LG V  +    + R F  +  + L   Y 
Sbjct: 1   MLDTVFFSHELLPALNRGLLVSLALIIPAGSLGFVGGVLIGCM-RTFGPRWLRRLGDWY- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T ++ G+P  V + + Y   +  P LG +    G        +   +    TAA+ +E 
Sbjct: 59  -TAILRGVPLAVQLMMIY---YALPKLGIYFAPYG--------AALTSFILCTAAYQSEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L+++ +GQ+ AA ALG +  +    +++PQA R  +P   ++ + L+K SSLA  V
Sbjct: 107 IRGALLSIRQGQIRAAQALGFSTWQTVAWIVVPQAARRALPGCGNEIIYLIKYSSLAYLV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +L+  G  + + T +  E+ +     YL +  +    +  L  +  +
Sbjct: 167 TCMELMGEGKVVASDTFRFTEVFITVGAYYLIMVTLATWLLRWLEKRFHV 216



 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 27/70 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G + +  L         + G L+G  R    + +  +   Y  + R +P  V +  
Sbjct: 14  ALNRGLLVSLALIIPAGSLGFVGGVLIGCMRTFGPRWLRRLGDWYTAILRGVPLAVQLMM 73

Query: 148 LYKSVLSVLP 157
           +Y ++  +  
Sbjct: 74  IYYALPKLGI 83


>gi|317052939|ref|YP_004119293.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953266|gb|ADU72737.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 221

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 104/231 (45%), Gaps = 13/231 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +   +  +        +    ++++ + + G ++ L    ++R    +    +   
Sbjct: 1   MNYQWDFSIIAQNFPVLLKGLGVTLELWLVAGLSGTIIGLILG-MARTNSRRWIMVITRS 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +  F     P L+ +      ++  PVL    F         F +  +AL+ YTAA+ +
Sbjct: 60  VVEVF--RNTPVLIQLI---WFYYAFPVLVGIQF-------STFGAAALALTLYTAAYSS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+GL ++ RGQ E A ALG++   A R ++LPQ  R ++P LT++ + L K +SLA 
Sbjct: 108 EIFRAGLQSIERGQWEGAKALGMSRPVALRRIILPQVFRRMLPALTNRMIELAKVTSLAS 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   +L+  G  + +   + +EI+ +   +Y  L    +   +RL     
Sbjct: 168 ILTVNELMYQGRLLSSTYYRPVEILTVVALLYFVLIWPGSYLASRLERHYR 218



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 33/66 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  L     +  TIIG ++G  R ++ + +  I R  VEVFRN P L+ + +
Sbjct: 16  VLLKGLGVTLELWLVAGLSGTIIGLILGMARTNSRRWIMVITRSVVEVFRNTPVLIQLIW 75

Query: 148 LYKSVL 153
            Y +  
Sbjct: 76  FYYAFP 81


>gi|239833764|ref|ZP_04682092.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Ochrobactrum intermedium LMG 3301]
 gi|239821827|gb|EEQ93396.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Ochrobactrum intermedium LMG 3301]
          Length = 230

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 96/204 (47%), Gaps = 18/204 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  F  + VLG+V +L      R    K       + +    +   P LV +   Y +  
Sbjct: 35  ATGFAIALVLGLVFALL-----RRSPYKIISWPTTVVVEF--LRDTPLLVQLFFLYYV-- 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V P F++  +AL    +A+ +E+ R G+ A+PRGQ EAA AL LT
Sbjct: 86  ---------LPVYGIVLPAFLTGALALGLQYSAYTSEVYRGGIEAIPRGQWEAARALNLT 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +++PQA+  IIP + +  +++LK + +   V   D++++   I ++T + +  
Sbjct: 137 PWRTYRDIVIPQAIPRIIPAMGNYLVSMLKETPVLSVVSIVDMLNLANLIGDRTFEYLVP 196

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
           + +   I+L L+++ +  +  L  
Sbjct: 197 LSMVGLIFLVLTLICSALIRLLER 220



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 34/70 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    + +G   T   A +G   A ++G +    R S  K+++W   V VE  R+ P LV
Sbjct: 18  SILPILAIGLTVTLKAAATGFAIALVLGLVFALLRRSPYKIISWPTTVVVEFLRDTPLLV 77

Query: 144 VIFFLYKSVL 153
            +FFLY  + 
Sbjct: 78  QLFFLYYVLP 87


>gi|331017861|gb|EGH97917.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 215

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++ L    + R   +   +    LYI  F  
Sbjct: 3   FTLWDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVM-RTSEKSGPRLAAKLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EA+ +L +T  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESISKGQWEASASLAMTPLEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 169 TKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHLERRL 211



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG LV   R S         ++Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTLALSLVAFIGGGLIGLLVMVMRTSEKSGPRLAAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMDISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|294629522|ref|ZP_06708082.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. e14]
 gi|292832855|gb|EFF91204.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. e14]
          Length = 344

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 18/196 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   V SF LG+V +L     +R      G         T  +   P LV +   + +  
Sbjct: 155 ALGSVISFALGLVWALLMRAPTRWVRWPVGAV-------TEFVRNTPLLVQLFFLFYV-- 205

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +   A+  + + +  ++ R+G+ AVP GQ EAA AL L 
Sbjct: 206 ---------LPEWGLTFSALTTGVFAIGLHYSTYTMQVYRAGIEAVPAGQWEAATALNLP 256

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+    V+LPQA+R ++P L +  +++LK++ + +A+   +++        Q  +  E 
Sbjct: 257 RRRTWTAVILPQAIRRVVPALGNYVISMLKDTPMLMAITVLEMLGQARLYSQQHFRFTEP 316

Query: 367 ILIWMFIYLSLSIMIA 382
           + +    ++ +S + +
Sbjct: 317 LTVIGVAFILVSYLAS 332



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 31/96 (32%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T      G + +  +G +      +  + V W      E  RN P LV +FFL+  
Sbjct: 146 GLLVTLQALALGSVISFALGLVWALLMRAPTRWVRWPVGAVTEFVRNTPLLVQLFFLFYV 205

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +              F + L+    +         A
Sbjct: 206 LPEWGLTFSALTTGVFAIGLHYSTYTMQVYRAGIEA 241


>gi|228989784|ref|ZP_04149764.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           pseudomycoides DSM 12442]
 gi|228769931|gb|EEM18514.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           pseudomycoides DSM 12442]
          Length = 214

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 106/206 (51%), Gaps = 19/206 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + SF++G ++                K   +  +  F++  +  L L+ + +  +F
Sbjct: 27  VVAILLSFIIGSIVGTLRYA----------KIPVVSQLLAFIVEIIRNLPLLLIIFFTYF 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P  G    I          +  +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL+
Sbjct: 77  ALPEAGLKLEIT--------TAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IE 365
           + +    ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     I  Q     I 
Sbjct: 129 YTQTLWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIINGQNVNYMIP 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
            +L+   +Y  ++  ++L   +L ++
Sbjct: 189 TLLLVACMYFVVNYSLSLVSRKLESR 214



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG++VG  R +   +V+ +    VE+ RN+P 
Sbjct: 8   TGDHVLFLLKGLLVTLEIAVVAILLSFIIGSIVGTLRYAKIPVVSQLLAFIVEIIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|68249725|ref|YP_248837.1| arginine transporter permease subunit ArtQ [Haemophilus influenzae
           86-028NP]
 gi|68057924|gb|AAX88177.1| arginine transport system permease protein [Haemophilus influenzae
           86-028NP]
          Length = 221

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 17/185 (9%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + LP + +   + FG   LV I     + F                   F     A
Sbjct: 51  VALLRGLPEIIVVLLVYFGSTELVEILTGEYIEFG-----------------AFGCGVFA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS   AA+ ++ +R  + A+P+GQ E+  ALGL+       +++PQ  R  +P L++Q+L
Sbjct: 94  LSLIFAAYASQTLRGAIQAIPKGQWESGAALGLSKSYTFIHIVMPQVWRHALPGLSNQWL 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLK+++L   +G  DL+     +   T Q      I   IYL+++++  + + +L  + 
Sbjct: 154 VLLKDTALVSLIGVDDLIHQADLMNTNTHQPFTWYGIAALIYLAVTLISQVGIRKLELRF 213

Query: 393 ALKEK 397
              E+
Sbjct: 214 TRFER 218


>gi|167904261|ref|ZP_02491466.1| hypothetical protein BpseN_18566 [Burkholderia pseudomallei NCTC
           13177]
          Length = 246

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++V+ +V+      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLAAWVIALVVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    PV            +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVVPELLPVSIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + +K
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMTFMRWVESK 236



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 48/95 (50%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLAAWVIALVVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP+   + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVVPELLPVSIGTWI 101


>gi|330501773|ref|YP_004378642.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328916059|gb|AEB56890.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 245

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 8/237 (3%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I     +   N  L              + +F + ++       ++R       +AL
Sbjct: 6   NWWIFFEPSLDGTNTYLMTLIWGACWTVATAIGAFTIALLFGSLVG-VARTSPLAWMRAL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYT 277
              ++  F    +P LV + L Y   F  P L   +        P   F +  I L CY 
Sbjct: 65  GTGFVELF--RNIPLLVQMFLWY---FVLPELLPTDLGRWFKQLPNAAFYTAVICLGCYH 119

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA +AE+VR+GL ++ RGQ  A +A+GLT  +  R VLLP A R ++P +TS++L+  KN
Sbjct: 120 AARMAEVVRAGLESLSRGQRMAGLAMGLTLVQTYRYVLLPMAYRIVVPAITSEFLSCTKN 179

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +S+A+A+G  +L      +   + Q  E       +YL L+++I   M  +  K A+
Sbjct: 180 TSVALAIGLMELTGSARAMQENSFQTFEAFTAATTLYLVLNLIIVFAMRAVERKAAV 236



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 37/78 (47%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
              ++Y   ++ G   T   A      A + G+LVG  R S    +  +   +VE+FRNI
Sbjct: 16  DGTNTYLMTLIWGACWTVATAIGAFTIALLFGSLVGVARTSPLAWMRALGTGFVELFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV +F  Y  +  +LP
Sbjct: 76  PLLVQMFLWYFVLPELLP 93


>gi|150375848|ref|YP_001312444.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Sinorhizobium
           medicae WSM419]
 gi|150030395|gb|ABR62511.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Sinorhizobium medicae WSM419]
          Length = 239

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 13/189 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       +AL   YI  F   G    V +   Y           F            
Sbjct: 58  LGRLSRFMAVRALATTYIEFF--RGTSIFVQLFWAY-----------FVLPFAGITLTPL 104

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  +AL     A+ AE+VR  + A+ R Q EA IAL LT  +A R ++LPQA+  ++P 
Sbjct: 105 QAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIALNLTRFQAMRHIILPQALPLMLPT 164

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  + LLK +++   +   D+      +  QTG  +      + +Y +++ +I++ M 
Sbjct: 165 FGNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGSTLIPFATILLLYFAMAWLISMGMR 224

Query: 387 RLNAKIALK 395
            L  +++  
Sbjct: 225 WLERRVSRG 233



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           ++ ++ ++    Y   IL G   T  L   G   A ++    G GRLS    V  +   Y
Sbjct: 18  NETMIDWSG---YIGLILQGAWVTVQLTLMGSALAVVVAFAAGLGRLSRFMAVRALATTY 74

Query: 133 VEVFRNIPPLVVIFFLYKSVL 153
           +E FR     V +F+ Y  + 
Sbjct: 75  IEFFRGTSIFVQLFWAYFVLP 95


>gi|296159044|ref|ZP_06841871.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295890605|gb|EFG70396.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 229

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S     VL L     ++    +    +  +Y  T L+ G+P LVL+ L + 
Sbjct: 15  WQTVKLAVLSLAFAFVLGLLGAA-AKLSKNRISNGVGTVY--TTLVRGVPDLVLMLLLFY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F++    L     A+  E  R   +AVPRGQ+EA  A 
Sbjct: 72  SIQIWLNNLTDLLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +    V+ PQ MR  +P + + +  ++K ++L   +G AD+V         T + 
Sbjct: 132 GMTGWQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVKASQDAGKGTLRF 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L    IYL ++ +    +  L+ + +   +K
Sbjct: 192 FFFTLFAGAIYLVITTVSNFVLMYLDKRYSTGVRK 226



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  LA   +  A ++G L  A +LS N++   +  VY  + R +P LV+
Sbjct: 6   YGPLLLNGTWQTVKLAVLSLAFAFVLGLLGAAAKLSKNRISNGVGTVYTTLVRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|238753990|ref|ZP_04615349.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia ruckeri ATCC 29473]
 gi|238707742|gb|EEQ00101.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia ruckeri ATCC 29473]
          Length = 245

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 4/245 (1%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL--SLFATRLSRH 210
           +++    D  +V P+  +L +  L    +++ T     +  F L       L + + S  
Sbjct: 1   MNLHQFTDWLLVSPYLGWLWDGFLLTLWISVCTVVAATLLGFFLAAARESHLKSWQWSAI 60

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
            +    +  PLL    F  F    ++       L  + P             S EF++ +
Sbjct: 61  AYSTLFRNTPLLIQLFFWYFAAGQILPSGWMEWL--NTPHELSLPGFTLYWPSFEFLAGF 118

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ Y+ AFIAE +R+G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +PPL  Q
Sbjct: 119 IGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQ 178

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           Y+N++KNSSLA+A+G A+L      +  +T +  +   +   +Y+S+  +I  +      
Sbjct: 179 YMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYISVIALIEAWGMWRQQ 238

Query: 391 KIALK 395
           ++A +
Sbjct: 239 RLAAR 243



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 40/88 (45%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
              +   S Y   +  GF+ T W++   ++ AT++G  + A R S  K   W    Y  +
Sbjct: 6   FTDWLLVSPYLGWLWDGFLLTLWISVCTVVAATLLGFFLAAARESHLKSWQWSAIAYSTL 65

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           FRN P L+ +FF Y +   +LP      
Sbjct: 66  FRNTPLLIQLFFWYFAAGQILPSGWMEW 93


>gi|15600347|ref|NP_253841.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107104254|ref|ZP_01368172.1| hypothetical protein PaerPA_01005328 [Pseudomonas aeruginosa PACS2]
 gi|116053301|ref|YP_793625.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894254|ref|YP_002443123.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254238143|ref|ZP_04931466.1| hypothetical protein PACG_04265 [Pseudomonas aeruginosa C3719]
 gi|9951455|gb|AAG08539.1|AE004928_5 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115588522|gb|ABJ14537.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126170074|gb|EAZ55585.1| hypothetical protein PACG_04265 [Pseudomonas aeruginosa C3719]
 gi|218774482|emb|CAW30299.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 231

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 2/200 (1%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            + V   +L      +++       + L   Y  T ++ G+P  + + + Y         
Sbjct: 24  LAAVCVGLLLGLLGAIAKTSKYAALRFLGGTY--TTIVRGVPETLWVLMIYFGTVSGLNA 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F         F +  +AL     A+  E+ R  L+++PRG  EA  ALGL+  +  
Sbjct: 82  LGDLFGKPDLALSPFAAGTLALGLCFGAYATEVFRGALLSIPRGHREAGQALGLSPGRIF 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQ  R  +P L + YL LLK+++L   +   +++       N T +     +   
Sbjct: 142 WRIVLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFTFYMTAA 201

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            IYLSL+++I + ++ L  +
Sbjct: 202 AIYLSLTVVIMVALHFLERR 221


>gi|254284659|ref|ZP_04959626.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|150425444|gb|EDN17220.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
          Length = 266

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYQWQWHRVPEYVLIFEDGEWWTGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFAALQMILVFAGLVWLLDSGAQAM-------GYQWQWHR----VPEYVLIFEDGE 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWTGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|55377276|ref|YP_135126.1| amino acid ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
 gi|55230001|gb|AAV45420.1| amino acid ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
          Length = 325

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 4/220 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T   + VFS  LG  L+L    + R +  +  + L L Y    LI G P 
Sbjct: 100 YLPALAHGIWTTVLLTVFSVCLGFALALPL-SVVRVYGGRWARWLALSYTE--LIRGTPL 156

Query: 235 LVLIALKYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L  + + Y       VL     +G G   +  F    I+ +  +AA+ +E +R+ L +V 
Sbjct: 157 LAQLFVLYFATSLTQVLRGVPGVGVGFIPAQAFWVAVISFTLNSAAYQSEYLRASLDSVD 216

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ+ AA A+GL+  +  R V++PQ +R  +P  T++ + L+K SSLA  +   +L    
Sbjct: 217 GGQLTAARAIGLSKLEGIRYVVVPQGLRLALPSWTNELVYLIKYSSLASFITVQELYGRT 276

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            T+ N+T Q  E+ ++   +YL+L +  +  M+R+ +  A
Sbjct: 277 STLANETYQYTELFVLVAILYLALVVSASALMDRVESHTA 316



 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
             + +      ++Y  A+  G   T  L    +     +   +   R+   +   W+   
Sbjct: 87  FAETLRFAADATAYLPALAHGIWTTVLLTVFSVCLGFALALPLSVVRVYGGRWARWLALS 146

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLP 157
           Y E+ R  P L  +F LY +      
Sbjct: 147 YTELIRGTPLLAQLFVLYFATSLTQV 172


>gi|120556216|ref|YP_960567.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinobacter aquaeolei VT8]
 gi|120326065|gb|ABM20380.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Marinobacter aquaeolei VT8]
          Length = 234

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 7/189 (3%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTV 262
           ++    +    +   Y  T LI G+P LV++ L Y      ++     L +   I     
Sbjct: 39  AKLSGSRVLTGIATAY--TTLIRGVPDLVMMLLFYYGGQVAVNALSDYLWETREIDFFFQ 96

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F+S  + +     A++ E  R   +AV +GQ+EAA A G +     R V++PQ +R 
Sbjct: 97  FDPFISGVVTIGLIFGAYMTETFRGAFLAVEKGQIEAARAYGFSTWHTFRRVMIPQMLRH 156

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P + + +  LLK ++L   +G  D+V V               +    +YL+L+    
Sbjct: 157 ALPGIGNNWQVLLKTTALVSIIGLTDMVRVAEEAAKAERMPFHFFIPVAAVYLALTAGSE 216

Query: 383 LFMNRLNAK 391
           LF+  L+ +
Sbjct: 217 LFIKWLDKR 225


>gi|326560583|gb|EGE10964.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           103P14B1]
 gi|326561456|gb|EGE11806.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           46P47B1]
 gi|326565591|gb|EGE15754.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           12P80B1]
 gi|326568463|gb|EGE18543.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           BC7]
 gi|326576285|gb|EGE26200.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           CO72]
          Length = 240

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 1/183 (0%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +       + +   Y +T +      L++  + +        + +     G     +F +
Sbjct: 40  KLSGVWILQKIADAY-TTIVRGIPELLMVFFIFFGGSIILVTIAKQMGYTGRIDVSQFWA 98

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              ALS    A+  E+ R  +  +P+GQ E+A ++G+T  +    ++LPQ     +P L 
Sbjct: 99  GVTALSIMFGAYATEVFRMAIQDIPKGQWESAQSIGMTPTQTLTRIILPQMWMVALPGLG 158

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  L LLK+++L   +G  DL+         T +     L   FIYL+L+ +I LF+   
Sbjct: 159 NLTLVLLKDTALVSLIGLQDLMYFAQRAAQSTQKPFTFYLAAAFIYLALTSVITLFIMWC 218

Query: 389 NAK 391
            ++
Sbjct: 219 ESR 221



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 42/106 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T  L  + ++   + G L    +LS   ++  I   Y  + R IP L++
Sbjct: 7   YGPILLQGTILTIKLGLASLVFGLLFGLLGALAKLSGVWILQKIADAYTTIVRGIPELLM 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +FF++     +L      +     + ++        L++   A   
Sbjct: 67  VFFIFFGGSIILVTIAKQMGYTGRIDVSQFWAGVTALSIMFGAYAT 112


>gi|322392218|ref|ZP_08065679.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
 gi|321144753|gb|EFX40153.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
          Length = 266

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 5/230 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F       G+      + T   + VF    GI+L+L     +     +     PL     
Sbjct: 25  FSWRSVFDGIPRIVQQLPTTLMLTVFGAFFGIMLALI---FAIVKINRVRFIYPLQAFFV 81

Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             + G P LV + L Y       K +  Q+         P      +A +   AA+ +E 
Sbjct: 82  SFLKGTPILVQLMLTYYGIPLALKALNQQWGTALNINAIPAATFAIVAFAFNEAAYASET 141

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + 
Sbjct: 142 LRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSA 201

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  ++ +    +     +  E  +    +Y  ++I+I      +  K+A+
Sbjct: 202 GVVEVFAQAQILGGADYRYFERFISVALVYWVVNIVIENLGRFIERKMAI 251


>gi|297571711|ref|YP_003697485.1| polar amino acid ABC transporter inner membrane protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296932058|gb|ADH92866.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 222

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 14/207 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + SFV+ +VL      ++    E+      +  +  ++  G P LV + + +  
Sbjct: 22  VTIPLALISFVIALVLGGL---VAVVRFERILVLAQIGAVYVWIFRGTPLLVQLFIVFY- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                            V   +    + L+    A+ AE +RSGL AVPRGQ EA  +L 
Sbjct: 78  ----------GLPRAGIVIDAWPVAIMTLALNAGAYTAEALRSGLKAVPRGQWEAGQSLN 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +THR+    ++ PQA R  IPPL+S +++L+K +SL  ++   D+   G  +   T + +
Sbjct: 128 MTHRQILWSIVAPQAFRIAIPPLSSDFIDLVKGTSLVSSITLVDVFLRGQQLAAVTFEPL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
            + +   FIYL ++ ++    + L  +
Sbjct: 188 LLYVEVAFIYLMINSVLTAGQHWLEKR 214



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 38/92 (41%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA    + A ++G LV   R     ++A I  VYV +FR  P LV +F ++  +   
Sbjct: 23  TIPLALISFVIALVLGGLVAVVRFERILVLAQIGAVYVWIFRGTPLLVQLFIVFYGLPRA 82

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             + D   V    + LN    +   L     A
Sbjct: 83  GIVIDAWPVAIMTLALNAGAYTAEALRSGLKA 114


>gi|150403150|ref|YP_001330444.1| polar amino acid ABC transporter inner membrane subunit
           [Methanococcus maripaludis C7]
 gi|150034180|gb|ABR66293.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanococcus maripaludis C7]
          Length = 226

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 14/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + L  + +           KI VFS ++G+ L      + R  +    +     YI 
Sbjct: 8   QFNLELFIKIIPQLIDGSILTIKITVFSIIIGLFLGTILG-MGRISYNILYRYFSSFYIE 66

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV I + Y           F           + +  +AL   + A++ EI+
Sbjct: 67  F--VRGTPLLVQIMIIY-----------FGLPSFGINLSAYTAGILALGLNSGAYVGEII 113

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           ++G+++V  GQMEAA +LG+ + +A R ++LPQA R+++P + ++++ LLK+SSL   + 
Sbjct: 114 KAGILSVHVGQMEAARSLGMNYAQAMRYIILPQAFRNVLPAIGNEFILLLKDSSLLSVIA 173

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L  VG  I + T  A   +L     YL +++ ++  +  +  +  +  
Sbjct: 174 IVELTRVGKQIYSSTYNAWTPLLGVALFYLIMTLPLSKLVQHIENRWKIDR 224



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  +    +I    +GT++G GR+S N L  +    Y+E  R  P LV I  +
Sbjct: 21  LIDGSILTIKITVFSIIIGLFLGTILGMGRISYNILYRYFSSFYIEFVRGTPLLVQIMII 80

Query: 149 YKSVLSVLPI 158
           Y  + S    
Sbjct: 81  YFGLPSFGIN 90


>gi|120612708|ref|YP_972386.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120591172|gb|ABM34612.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 230

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 5/235 (2%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            + L F  +  +    F       +  + + + + GI+L      L R    K       
Sbjct: 1   MMNLDFSFYSWDIISKFVVKGFYFSFMLTLIATIGGILLGTVL-ALMRLSGRKWLDVPAT 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y++         LV++ L + L              GS+   E  S  I    + AA+ 
Sbjct: 60  IYVNGMRSIP---LVMVILWFFLLVPASFYAALPGGIGSSYRSEL-SAIITFIAFEAAYF 115

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ ++PRGQ+ A  ALG+T+ +  ++V+LPQA R+++P L +Q + L +++SL 
Sbjct: 116 SEIMRAGIQSIPRGQVFAGQALGMTYGQNMKIVILPQAFRNMLPVLLTQTIILFQDTSLV 175

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+G  D++    T     G+ IE  L+   +Y  +   ++  + RL+ KIA+  
Sbjct: 176 YAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYFMMCFALSWAVKRLHRKIAIIR 230


>gi|315639957|ref|ZP_07895087.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484282|gb|EFU74748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 223

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 17/233 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + + + +    +S+   T+  +     F+ ++G+V++L      +            
Sbjct: 2   KFDVNYMLEVFPSIVSYVPTTLMLSIISMFFAVIIGLVIALL-----KRSEIPGLTQFAT 56

Query: 222 LYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LYIS F   G+PTLV + + Y  L    P +                +  I  S   +++
Sbjct: 57  LYISLF--RGMPTLVQLFIIYYGLPQIFPEMSNLQASQ---------AAIIGFSLKESSY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI R+ L +V +GQMEA +A+G+   K    ++LPQA  + +P   + +++L+K SSL
Sbjct: 106 LAEIFRAALGSVDKGQMEAGLAVGMKKVKIYTRIILPQAAVNALPATGNTFISLIKESSL 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +G  +L + G  +   + +  E  L+   +Y  L I+ + F   +   ++
Sbjct: 166 AFTLGITELFAEGKMLAAASLRFFETYLVVGLVYWGLIIIYSFFQRLVEKALS 218



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 31/66 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+   M  A IIG ++   + S    +     +Y+ +FR +P LV +F +Y  +  +
Sbjct: 22  TLMLSIISMFFAVIIGLVIALLKRSEIPGLTQFATLYISLFRGMPTLVQLFIIYYGLPQI 81

Query: 156 LPIPDH 161
            P   +
Sbjct: 82  FPEMSN 87


>gi|261404397|ref|YP_003240638.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|329929716|ref|ZP_08283402.1| putative glutamine ABC transporter, permease protein GlnP
           [Paenibacillus sp. HGF5]
 gi|261280860|gb|ACX62831.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|328935933|gb|EGG32392.1| putative glutamine ABC transporter, permease protein GlnP
           [Paenibacillus sp. HGF5]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 19/220 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+       +FSF++G VL                K   L   + FL+  +
Sbjct: 13  RYLLQGFWITVQVAGLSIIFSFIIGTVLGTVRY----------TKTPFLSRTTAFLVDII 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + + +    P              P F +  + LS +  A IAEIVRSGL++V
Sbjct: 63  RNLPLLLIIFFIGMVLPQT--------GIRIPTFWAAVVGLSIFEGAMIAEIVRSGLVSV 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ+EAA A GL++ +  R V+LP A+R + PP+ SQ+++L+K++SLAV +   +L+  
Sbjct: 115 DKGQIEAARASGLSYMQTLRHVILPLALRRMSPPMVSQFISLIKDTSLAVIISLPELMRN 174

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +   +    I  ++    +Y +L+ ++++   RL A+
Sbjct: 175 VQILSGSSYSYVIPALVFASLLYFTLNYLLSIIAKRLEAR 214



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L GF  T  +A   +I + IIGT++G  R +    ++      V++ RN+P 
Sbjct: 8   SWPNLRYLLQGFWITVQVAGLSIIFSFIIGTVLGTVRYTKTPFLSRTTAFLVDIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L++IFF+   +               G+
Sbjct: 68  LLIIFFIGMVLPQTGIRIPTFWAAVVGL 95


>gi|170693091|ref|ZP_02884252.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia graminis C4D1M]
 gi|170142089|gb|EDT10256.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia graminis C4D1M]
          Length = 219

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 12/209 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   + VL I ++  AT  ++       + L   Y+  F   G   LV +   + +
Sbjct: 14  VTVEIAALATVLAIAMAFIATA-AKLAPWTPLRWLGNAYVEIF--RGTSLLVQLFWFFFV 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P                F    + L  +  A+ +EI+R  L +VP GQ EAA+AL 
Sbjct: 71  LPLPPF---------RIEMTPFTVAIVGLGLHYGAYGSEILRGALRSVPGGQFEAALALN 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R ++LPQAM + +PP T+  + LLK +SL   +  +DL      +   T +  
Sbjct: 122 MSPLTRMRRIILPQAMINALPPATNLMIELLKGTSLVSLITLSDLTFRARQLDEATFKTA 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           EI ++ + IY  L+ ++   M     +++
Sbjct: 182 EIFMLTLVIYFVLAQILVALMRHFEHRVS 210



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A    + A  +  +  A +L+    + W+   YVE+FR    LV +F+ 
Sbjct: 8   LLQGTLVTVEIAALATVLAIAMAFIATAAKLAPWTPLRWLGNAYVEIFRGTSLLVQLFWF 67

Query: 149 YKSVLSVLPIPDHSI 163
           +  +       + + 
Sbjct: 68  FFVLPLPPFRIEMTP 82


>gi|271501471|ref|YP_003334497.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345026|gb|ACZ77791.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 238

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 13/214 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +F  SFV+G  LS+    + R            LY+  F   G P L+ + L Y 
Sbjct: 19  PVTLGLFFSSFVVGAALSVLLVAM-RVSAIWPLSGFARLYMLIF--RGTPLLIQLFLVYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF+ +  S   P     F    +AL+  TA + AEI+R  L++VP GQ+EA
Sbjct: 76  ------GLGQFSVVRDSLFWPVLRDPFSCAVMALALCTAGYTAEILRGALLSVPAGQIEA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +A G++     R ++ P A+R  +P  +++ + L+K+++LA  V   D+  V   II +
Sbjct: 130 GLACGMSRWLLLRRIIAPVALRHALPAWSTEAILLIKSTALASLVTVWDITGVAQQIIQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T + +E+ +    IYL L+ +I      L   ++
Sbjct: 190 TYRTLEVFVCAALIYLLLNFIIVRVFAWLERALS 223



 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 3/152 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L FS  +    +  L+ A R+SA   ++   R+Y+ +FR  P L+ +F +
Sbjct: 14  LLSALPVTLGLFFSSFVVGAALSVLLVAMRVSAIWPLSGFARLYMLIFRGTPLLIQLFLV 73

Query: 149 YK--SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK-IFVFSFVLGIVLSLFAT 205
           Y      SV+       VL          L+  T           + S   G + +  A 
Sbjct: 74  YYGLGQFSVVRDSLFWPVLRDPFSCAVMALALCTAGYTAEILRGALLSVPAGQIEAGLAC 133

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
            +SR    +   A   L  +         L++
Sbjct: 134 GMSRWLLLRRIIAPVALRHALPAWSTEAILLI 165


>gi|121603938|ref|YP_981267.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120592907|gb|ABM36346.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 216

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 14/227 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      +            + + S +L  VL L    + R         L    I
Sbjct: 1   MTQFLHHAREFMPILLQGAWLTILVTLGSLLLSTVLGLV-WAVMRVSGIPLLANLSAAII 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  L+ G+P +V++   Y           F             +  + L    +A+ AE 
Sbjct: 60  N--LLRGIPIIVILFFLY-----------FVMPDVGISLSALQAGILGLGIAYSAYQAEN 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ AV  GQ+EAA A+G+      R V+LPQA++ ++PP  +  + +LK+SS A  +
Sbjct: 107 FRAGIEAVDHGQVEAARAMGMGWGLMMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             A+L   G  I   T Q   +  +   IYL + + + L +  L  +
Sbjct: 167 TVAELALQGKMIATSTFQNATVFTLVALIYLVMCVPLILLVRHLEKR 213



 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 3/123 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +T++G +    R+S   L+A +    + + R IP +V++FFL
Sbjct: 15  LLQGAWLTILVTLGSLLLSTVLGLVWAVMRVSGIPLLANLSAAIINLLRGIPIIVILFFL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA---KIFVFSFVLGIVLSLFAT 205
           Y  +  V            G+ +               A        +  +G+   L   
Sbjct: 75  YFVMPDVGISLSALQAGILGLGIAYSAYQAENFRAGIEAVDHGQVEAARAMGMGWGLMMR 134

Query: 206 RLS 208
           R+ 
Sbjct: 135 RVV 137


>gi|330811617|ref|YP_004356079.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379725|gb|AEA71075.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 219

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 11/191 (5%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R    +  +   + YI  F   G   LV +   + +    P   + +          + 
Sbjct: 36  GRLSPWRALRWFSITYIEVF--RGTSLLVQLFWLFFVLPLPPFNVELS---------PYA 84

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              + L  +  A+ AE++R  + +V +GQ EA  AL  +     + ++LPQA+ + IPP 
Sbjct: 85  VAIVGLGLHIGAYGAEVMRGAISSVAKGQYEACTALNFSGFTRFKRIILPQALLAAIPPG 144

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T+  + LLKN+SL   +  +DL      +   T Q +EI  + + +Y  L+  I   M  
Sbjct: 145 TNLLIELLKNTSLVSLITLSDLSFRARQLDQATFQTLEIFSLALVMYFILAQAINFGMRH 204

Query: 388 LNAKIALKEKK 398
           +  +++    +
Sbjct: 205 IERRLSRGRMR 215



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  + F G + A +   L   GRLS  + + W    Y+EVFR    LV +F+L
Sbjct: 8   LIQGAWVTLQVTFFGSLLAIVAAVLAALGRLSPWRALRWFSITYIEVFRGTSLLVQLFWL 67

Query: 149 YKSVLSVLPI 158
           +  +      
Sbjct: 68  FFVLPLPPFN 77


>gi|239947119|ref|ZP_04698872.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921395|gb|EER21419.1| glutamine ABC transporter, permease/substrate-binding protein
           [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 218

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 103/228 (45%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      + F         K  V + + G+V+ +    + +    +  +     Y 
Sbjct: 1   MFEYLTKFYPKILFIVEGTLVTLKYSVIAVIFGLVIGMLL-AICKVNKNRALRFFANFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ +++ Y   F  P +    F         F +  I+ S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLSIIY---FASPYIIVVKF-------SVFTAGAISFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EAA AL +      + ++LPQA+++I P L ++ +NL+K S++   +
Sbjct: 108 IRAGINAVDKGQFEAAEALAIPKFLIMKDIILPQAVKNIFPSLVNELVNLIKESAIISML 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      +LI    Y  L ++I+     +  K+
Sbjct: 168 GEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKM 215



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N+ + +    Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRFFANFYTSIFRGTPLLIQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|313497435|gb|ADR58801.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 223

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 7/230 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          L      M    K+ V   + GIVL      L R    K    +   Y+
Sbjct: 1   MEMDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTIL-ALMRLSSSKLLSNVAGAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F      ++ L+ +    +   P + ++   G  T    F S  +A   + AA+  EI
Sbjct: 60  NYFR-----SIPLLLVITWFYLAVPFVLRW-ITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++ +GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   V
Sbjct: 114 VRAGVQSISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D ++   +  +  G++ E ++    +Y  +S   +  + RL  +I +
Sbjct: 174 GLVDFLNSARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRITV 223



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++       A+  G V T  L   G+I   ++GT++   RLS++KL++ +   YV  F
Sbjct: 3   MDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNVAGAYVNYF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R+IP L+VI + Y +V  VL                               
Sbjct: 63  RSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113


>gi|83720040|ref|YP_442303.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|257138498|ref|ZP_05586760.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83653865|gb|ABC37928.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 229

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +A    Y  T LI  +P LVL+ L +                       F++
Sbjct: 39  KLSRNRVLRAGATAY--TTLIRSVPDLVLMLLLFYSIQIWLNQLTDLMNWEQIDIDPFVA 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   +AVPRGQ+EA  A G++  +    ++ PQ MR  +P + 
Sbjct: 97  GVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGMRVFARIMFPQMMRFALPGIG 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T      IL+   +YL+++    L + +L
Sbjct: 157 NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALVYLAITTASNLVLKQL 216

Query: 389 NAKIALKEKK 398
             + ++  + 
Sbjct: 217 EKRYSIGVRH 226


>gi|323518735|gb|ADX93116.1| ABC-type arginine transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 214

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 4/201 (1%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFI 257
           V+       S+  + K  + +   Y  T LI  +P LV++ L +  L      + +   +
Sbjct: 14  VIIGLIGASSKLSNIKALRYIATAY--TTLIRSVPDLVIMLLLFYSLQLGLNQITEALQM 71

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
               ++P F++  I L+    A+  E  R    +VPRGQ+EAA+A G+T  +    VL P
Sbjct: 72  DQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPRGQIEAAMAYGMTPWQVFHRVLFP 130

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q MR  +P + + +  L+K ++L   +G  D+V +       T Q     ++   I+L++
Sbjct: 131 QMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQDAGRSTMQLFFFSIVAAAIFLAI 190

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           + +  L +  L    +   +K
Sbjct: 191 TTVSNLILIWLERHYSAGVRK 211


>gi|238897603|ref|YP_002923282.1| high-affinity glutamine transport protein (ABC superfamily,
           membrane) [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465360|gb|ACQ67134.1| high-affinity glutamine transport protein (ABC superfamily,
           membrane) [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 218

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +  K    + L++I   LI G P +V +   Y   F  P++              F +
Sbjct: 44  RAYGGKISSNVALIFIE--LIRGTPIVVQVMFIY---FALPMMVPIRI-------DPFTA 91

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + +   + A+IAEI R  ++++ +G  EA +ALGL+ R   R V+ P A+R ++PPL 
Sbjct: 92  AVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRDTLRYVVAPLALRRMLPPLG 151

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q++  +K++SL + +G A+L   G  II    +A+EI      +YL +++ +   + RL
Sbjct: 152 NQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVMYLIITLTLGFVLRRL 211

Query: 389 NAKIAL 394
             K+ +
Sbjct: 212 ERKLKI 217


>gi|126737935|ref|ZP_01753665.1| ABC-type amino acid transport system, permease component
           [Roseobacter sp. SK209-2-6]
 gi|126721328|gb|EBA18032.1| ABC-type amino acid transport system, permease component
           [Roseobacter sp. SK209-2-6]
          Length = 222

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 103/235 (43%), Gaps = 18/235 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 F   +  R ++    T+      +  + VLG+ L++      R           
Sbjct: 2   FDWKWEFAWEILPRLVTATGNTLLAAGAGYAIALVLGLALAIAQRSPYRGL-------TF 54

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           ++      I   P L+ I   + +        QF           +MS  IA+  + + +
Sbjct: 55  VVREFVEFIRSTPLLLQIFFIFYVG------PQFG-----IRLSPWMSGMIAIGLHYSCY 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E+ R G+ +VP+GQ EAAIAL +T  +  R V++PQA+ S +  + +  + + K++ +
Sbjct: 104 LSEVYRGGIDSVPKGQWEAAIALNMTTVQKYRRVIIPQAIPSALSGMGNYLVGIFKDTPM 163

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +G A+L+     I ++  + +E   +   I+L++S+  A  +  +  ++  K
Sbjct: 164 LSVIGVAELIHTANAIGSEHYRFLEPFTMVGIIFLAISLPAAGLIRLVEGRVRRK 218



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 34/86 (39%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +         ++    NT   A +G   A ++G  +   + S  + + ++ R +VE  R+
Sbjct: 6   WEFAWEILPRLVTATGNTLLAAGAGYAIALVLGLALAIAQRSPYRGLTFVVREFVEFIRS 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIV 164
            P L+ IFF++             + 
Sbjct: 66  TPLLLQIFFIFYVGPQFGIRLSPWMS 91


>gi|191638945|ref|YP_001988111.1| Glutamine transport system permease protein [Lactobacillus casei
           BL23]
 gi|190713247|emb|CAQ67253.1| Glutamine transport system permease protein [Lactobacillus casei
           BL23]
          Length = 220

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 19/221 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T++ +     FSF+LG++L L      ++F    G          F+I  +
Sbjct: 14  RYLLQGLGVTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVG----------FVIDVI 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + +  +F  P +                +  IA+S + +A +AEIVRSG+ AV
Sbjct: 64  RNLPLLLILFFTYFALPDI--------GIRLNVVAAAIIAMSIFESAMLAEIVRSGINAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA  +   +    
Sbjct: 116 PRGQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYH 175

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I  Q     I + +    +Y  ++  ++L    L+ ++
Sbjct: 176 AQIIYGQNINYMIPMFVALALMYFVVNYALSLASRWLDRRL 216



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +  + I+G ++G  R    K  + I    ++V RN+P 
Sbjct: 9   SWINLRYLLQGLGVTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDVIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPI 158
           L+++FF Y ++  +   
Sbjct: 69  LLILFFTYFALPDIGIR 85


>gi|104780399|ref|YP_606897.1| glutamate-aspartate ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95109386|emb|CAK14086.1| Glutamate-aspartate ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 223

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 7/230 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          L      M    ++ V   V GI L      L R    K    +   Y+
Sbjct: 1   MDMDFSEIIPALPALWDGMVLTLQLMVMGVVGGIALGTIL-ALMRLSSNKLLANIAGTYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F      ++ L+ +    +   P + ++   G  T    F S  +A   + AA+  EI
Sbjct: 60  NYFR-----SIPLLLVITWFYLAVPFVLRW-ITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++ +GQM AA ALG+++ +  RL++LPQA R + P L  Q + L +++SL   V
Sbjct: 114 VRAGVQSISKGQMGAAQALGMSYGQCMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D ++   +  +  G++ E ++    +Y  +S   +  + RL  +I +
Sbjct: 174 GLIDFLNSARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRITV 223



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 59/168 (35%), Gaps = 8/168 (4%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++       A+  G V T  L   G++    +GT++   RLS+NKL+A I   YV  F
Sbjct: 3   MDFSEIIPALPALWDGMVLTLQLMVMGVVGGIALGTILALMRLSSNKLLANIAGTYVNYF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF---- 192
           R+IP L+VI + Y +V  VL                                        
Sbjct: 63  RSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEIVRAGVQSIS 122

Query: 193 ----SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                    + +S           +   K  PLL   + ++F   +LV
Sbjct: 123 KGQMGAAQALGMSYGQCMRLIILPQAFRKMTPLLLQQSIILFQDTSLV 170


>gi|270290991|ref|ZP_06197214.1| polar amino acid transport system permease [Pediococcus
           acidilactici 7_4]
 gi|304385263|ref|ZP_07367608.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
 gi|270280387|gb|EFA26222.1| polar amino acid transport system permease [Pediococcus
           acidilactici 7_4]
 gi|304328470|gb|EFL95691.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Pediococcus acidilactici DSM 20284]
          Length = 216

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 15/231 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +   +  L           ++F+++ +  ++L +F   L      K  + +   Y+ 
Sbjct: 1   MFNIQYISEILPSLLSGAAMTLQVFIWTIIGSLILGVFL-ALGLVSKFKPLQYIISAYV- 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            +L+ G P L+ +   +                   V P + +   A     AA+ AEI 
Sbjct: 59  -WLMRGTPLLLQLIFVFY-----------GLPTVGIVFPRYEAALFAFILNYAAYFAEIF 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL +V +GQ EA   L +T+ + T+ V+LPQ  + ++P + ++ +NL+K+SSL   +G
Sbjct: 107 RGGLQSVDKGQYEAGRVLQMTYWQTTKKVVLPQVAKIVLPSIGNEVINLVKDSSLVYVIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             DL+  G     +    +   ++   +YL L+ +   F+ ++    +   
Sbjct: 167 IGDLLRAGNVAAARD-VTLVPFILVGIMYLILTGICTFFLRKVEKHYSYFR 216



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S    ++L G   T  +    +I + I+G  +  G +S  K + +I   YV + R  P L
Sbjct: 8   SEILPSLLSGAAMTLQVFIWTIIGSLILGVFLALGLVSKFKPLQYIISAYVWLMRGTPLL 67

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + + F++  + +V  +        F   LN              +
Sbjct: 68  LQLIFVFYGLPTVGIVFPRYEAALFAFILNYAAYFAEIFRGGLQS 112


>gi|123443061|ref|YP_001007035.1| glutamine ABC transporter permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122090022|emb|CAL12880.1| putative glutamine transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 218

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +     + + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FALPMMM-------PVRIDPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 90  SAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217


>gi|33596592|ref|NP_884235.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis 12822]
 gi|33601145|ref|NP_888705.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
 gi|33573293|emb|CAE37274.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
 gi|33575580|emb|CAE32658.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 223

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 12/210 (5%)

Query: 187 AKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             I V + +LG+++++     L+            L  +    +   P LV +   Y L 
Sbjct: 21  LVITVQATLLGMLVAVTLGLALALLRRSPFWPVSALTALVIEFVRSTPLLVQM---YFLF 77

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  PV                 +  +AL  + AA+ AE+ R+G+ AVPRGQ EAA AL L
Sbjct: 78  YVLPVT--------GWQMSPLTTGILALGLHYAAYCAEVYRAGIEAVPRGQHEAATALNL 129

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    V+LPQA+  ++P L +  + + K++ L  A+   +L+     I + T +  E
Sbjct: 130 SRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKIIGSTTFRYTE 189

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + +   ++L LS++ A  + RL A++ L 
Sbjct: 190 PLTLVGVLFLLLSLVAAWGVRRLEARLKLY 219


>gi|307131246|ref|YP_003883262.1| ABC transporter permease [Dickeya dadantii 3937]
 gi|306528775|gb|ADM98705.1| ABC transporter permease protein [Dickeya dadantii 3937]
          Length = 234

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 107/249 (42%), Gaps = 17/249 (6%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y   +       +              L     T+       +   ++G +L+      
Sbjct: 1   MYAIGVIREKHMRYQWDFSALPHWWPLLLDGLWGTVRIGFTSILIGMLVGALLAAM---- 56

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            +    +  +    L+I  +          I   + +++  PV+              F 
Sbjct: 57  -KLSSTRLLRLPAHLFIGFYRNTPA-----IVHFFWIYYALPVVSPLTL-------SPFA 103

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +   ALS  +AAF AE+ R G++++  GQ E A ALG++   A R V+LPQA+R +IPPL
Sbjct: 104 AAVTALSAQSAAFYAEVYRGGILSIAEGQWEGAKALGMSRPLALRRVILPQALRRMIPPL 163

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             +   L+K++SLA ++ + +L+     I +Q+ + +E+  +   +Y +L  +++L    
Sbjct: 164 IERSFELIKSTSLASSLAYGELLYQAMQINSQSFRPLEVYSLAALLYFTLLFVLSLLSQY 223

Query: 388 LNAKIALKE 396
           +  +++   
Sbjct: 224 VERRLSYAR 232



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 43/80 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   +   +L G   T  + F+ ++   ++G L+ A +LS+ +L+     +++  +R
Sbjct: 17  DFSALPHWWPLLLDGLWGTVRIGFTSILIGMLVGALLAAMKLSSTRLLRLPAHLFIGFYR 76

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
           N P +V  F++Y ++  V P
Sbjct: 77  NTPAIVHFFWIYYALPVVSP 96


>gi|209558800|ref|YP_002285272.1| Putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes NZ131]
 gi|209540001|gb|ACI60577.1| Putative glutamine-binding periplasmic protein [Streptococcus
           pyogenes NZ131]
          Length = 498

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 13/197 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL--PLLYISTFL 228
             + L    +T+  +    +    +G+++ +F T   ++H     G+ L   LL I   +
Sbjct: 289 WKQFLRGTGMTLLISMGGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P +V   + Y                        ++    +S  T A+++EIVR G
Sbjct: 349 FRGTPMIVQSMVIYYGTAQA----------FGISIDRTLAAIFIVSINTGAYMSEIVRGG 398

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV +GQ EAA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +
Sbjct: 399 IFAVDKGQFEAATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVE 458

Query: 349 LVSVGGTIINQTGQAIE 365
           L   G T+  QT     
Sbjct: 459 LYFSGNTVATQTLPIFP 475



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 10/81 (12%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN----------KLVAWICRVYVEV 135
               L G   T  ++  G I    IG L+G  R +            KL  W+  +Y+E+
Sbjct: 289 WKQFLRGTGMTLLISMGGTITGLFIGLLIGIFRTAPKAKHKVAALGQKLFGWLLTIYIEI 348

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR  P +V    +Y       
Sbjct: 349 FRGTPMIVQSMVIYYGTAQAF 369


>gi|167586131|ref|ZP_02378519.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Burkholderia ubonensis Bu]
          Length = 225

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           +I   + V+GIV       L R    K        Y
Sbjct: 1   MHQFDWSSIPGALPTLWTGAVITLQITALAIVVGIVWGTLL-ALMRLSGVKPLAWFAQGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P + Q       T+     S  +A S + AA+ +E
Sbjct: 60  VTVFRSIP---LVMVLLWFFL--IVPQVLQGVLGLSPTIDIRLASAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ AVPRGQ+ AA ALG+ +  A RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQAVPRGQVNAAFALGMNYATAMRLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD       I ++ G ++E+IL     Y  +  + +  +  L  K+  
Sbjct: 175 ISLADFFRTAANIGDRDGTSVEMILFAGACYFVICSVASALVKGLQKKVTR 225



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  +    ++   + GTL+   RLS  K +AW  + YV VFR+IP ++V+ + 
Sbjct: 16  LWTGAVITLQITALAIVVGIVWGTLLALMRLSGVKPLAWFAQGYVTVFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|47568094|ref|ZP_00238799.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
 gi|47555248|gb|EAL13594.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9241]
          Length = 214

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +        F +  G          F++  +  L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILG----------FIVEVIRNL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P +G    I          ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 66  PLLLIIFFTYFALPEVGLKLEI--------ITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     
Sbjct: 118 QMEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++  V
Sbjct: 68  LLIIFFTYFALPEV 81


>gi|328555067|gb|AEB25559.1| YtmL [Bacillus amyloliquefaciens TA208]
 gi|328913424|gb|AEB65020.1| polar amino acid transport system permease protein [Bacillus
           amyloliquefaciens LL3]
          Length = 240

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 6/190 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +       L  LYIS F   G P +V + + +   +  P L     I  S + P   +
Sbjct: 46  RIYRIPVLNPLAKLYISFF--RGTPIMVQLFIVF---YGIPALTALGGIDTSKMDP-LYA 99

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
                +  +AA  AEI+R G+ +V  GQ EAA+++GL   +  R ++LPQA+    P + 
Sbjct: 100 AIATYALSSAARAAEIIRGGVNSVDAGQTEAALSIGLNGGQTFRRIILPQALLQAFPNIG 159

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  +  LK++SLA ++G  D+   G T+I  +  ++E+ +    +Y + +++        
Sbjct: 160 NMVIGFLKDTSLAFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLYYAAALLFECVFRWA 219

Query: 389 NAKIALKEKK 398
             +I   E +
Sbjct: 220 EKRIKKDETR 229


>gi|327192279|gb|EGE59244.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 219

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L       + + SF+           L R    K  +A    YI  F  
Sbjct: 4   FTLWDILRNLLLATRWTILLSLVSFIG-GGAVGLGLLLLRISKNKACRAFAKYYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F         P +++  +AL  +TAAF+AEI R  +
Sbjct: 61  QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLAAGMALILWTAAFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V  GQ EA+ +LG+   +  R V+LPQA+R  IPP     + ++K ++L   +GF +L
Sbjct: 110 ESVASGQWEASASLGMGRLQQMRYVILPQALRVAIPPTVGFSVQIIKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 170 SKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 217



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 46/144 (31%), Gaps = 3/144 (2%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    I    +G  +   R+S NK      + Y+E+F+  P L
Sbjct: 7   WDILRNLLLATRWTILLSLVSFIGGGAVGLGLLLLRISKNKACRAFAKYYIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +F  +  +          +     + L               +   V S       SL
Sbjct: 67  MQLFIAFFGLGLFGIDVPAWLAAGMALILWTAAFLAEIWRGCVES---VASGQWEASASL 123

Query: 203 FATRLSRHFHEKTGKALPLLYIST 226
              RL +  +    +AL +    T
Sbjct: 124 GMGRLQQMRYVILPQALRVAIPPT 147


>gi|15965624|ref|NP_385977.1| amino acid ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307314028|ref|ZP_07593641.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307321205|ref|ZP_07600607.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15074805|emb|CAC46450.1| Amino acid transport system permease [Sinorhizobium meliloti 1021]
 gi|306893107|gb|EFN23891.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306899150|gb|EFN29789.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 267

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 2/212 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A + V +  +G+V+  F   L++   EK+ +    +Y + F       L L  + Y L
Sbjct: 55  VTASLAVATLPVGLVIGFFV-ALAKQSEEKSLRLAGNIYTTIFRGL-PELLTLFIVYYGL 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G+     F++  IAL    +A+ +E++ S   A+P GQ EA  ALG
Sbjct: 113 QILVQQFLATVGYEGAVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIPHGQYEAGDALG 172

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   K  RL++LPQ +R  +P L + ++ LLK+++L   +G  D++   G     T  A 
Sbjct: 173 LHRGKTMRLIILPQLIRIALPGLGNLWMALLKDTALVSVIGLPDILRQTGIAARVTKHAF 232

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E   I   ++L L+++ ++  + L       E
Sbjct: 233 EFFGIACVLFLVLAMISSVVFSALERSTKRAE 264



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 8/156 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  GF+ T  LA + +    +IG  V   + S  K +     +Y  +FR +P L+ 
Sbjct: 45  WGDEIAYGFLVTASLAVATLPVGLVIGFFVALAKQSEEKSLRLAGNIYTTIFRGLPELLT 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  +  ++     ++     + +N              A   VFS     VL L A
Sbjct: 105 LFIVYYGLQILVQQFLATVGYEGAVEIN-------AFVAGMIALGVVFSAYCSEVL-LSA 156

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            +   H   + G AL L    T  +  LP L+ IAL
Sbjct: 157 FKAIPHGQYEAGDALGLHRGKTMRLIILPQLIRIAL 192


>gi|298290885|ref|YP_003692824.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927396|gb|ADH88205.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 249

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 5/211 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+   S  LG +LSL    ++R    K    L   Y   F   G P L    L Y 
Sbjct: 38  WVTLKLVGLSVFLGALLSLPL-AIARVEGGKFLSRLSFGYSYFF--RGTPLLAQTFLVYY 94

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               +      +          F       +  TAA+ +EI+R G+ ++P GQMEAA +L
Sbjct: 95  -GAGQFREQLTDIGLWWFFRDAFNCAVFTFTLNTAAYQSEILRGGIQSLPAGQMEAAQSL 153

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+   A R V+LPQA+   + PL ++ + ++K+S++A  +   DL+ V     +++   
Sbjct: 154 GLSRFLAYRKVILPQAIAIGLRPLGNELILMIKSSAIASVITVYDLMGVTRLAFSRSYD- 212

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +E+ L    +YL +  ++    + L  ++  
Sbjct: 213 MEVYLWAAVLYLVMVEIVRRVWDVLERRLNR 243



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 25/86 (29%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G   T  L    +    ++   +   R+   K ++ +   Y   FR  P L
Sbjct: 27  DRYGLRFLDGVWVTLKLVGLSVFLGALLSLPLAIARVEGGKFLSRLSFGYSYFFRGTPLL 86

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFG 168
              F +Y              +  F 
Sbjct: 87  AQTFLVYYGAGQFREQLTDIGLWWFF 112


>gi|289627187|ref|ZP_06460141.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289648679|ref|ZP_06480022.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|330868024|gb|EGH02733.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 220

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++   +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVQVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +L      I  ++ + IE  L+   +Y+    +IA+ +  L  ++A++ 
Sbjct: 167 AIAVPELTYYARKINVESYRVIETWLVTTALYVVACYVIAMLLRTLEQRLAIRR 220


>gi|240102150|ref|YP_002958458.1| Amino acid ABC transporter, permease protein [Thermococcus
           gammatolerans EJ3]
 gi|239909703|gb|ACS32594.1| Amino acid ABC transporter, permease protein [Thermococcus
           gammatolerans EJ3]
          Length = 229

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 99/190 (52%), Gaps = 12/190 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L   +  KT + + ++Y  T     L  + L+A+ + + +  P+L              
Sbjct: 42  ALMETYGGKTLRRVAMVYEGT-----LRGIPLLAIYFVIFYSMPMLIGLGL-------SP 89

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  + L   ++A+ ++I RSG+ AV  GQ+EAA++LG++  +  R ++LPQA+R  IP
Sbjct: 90  FLAAVVGLGIRSSAYQSQIFRSGIQAVDEGQIEAALSLGMSQWQIIRHIVLPQALRMSIP 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++Y+ +LK++S+A+A+G  +L      +++ T +      +    YL++ + +    
Sbjct: 150 AWMNEYVIVLKDTSIALALGIVELTRQATYLVSITAEPFRYYGLAALFYLAMVLPLTYLA 209

Query: 386 NRLNAKIALK 395
           N +  +  +K
Sbjct: 210 NWMGKRYGIK 219


>gi|254469435|ref|ZP_05082840.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211961270|gb|EEA96465.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 555

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 109/260 (41%), Gaps = 21/260 (8%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P   +I       +S   IP  ++     +      L   +        +  F  +L ++
Sbjct: 310 PSHALITVEKNKRVSAAFIPTEAVPADANLLWQTSFLPDESKYPAITFGVLGFFTMLLVI 369

Query: 200 LSLFAT----RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
            S++       ++  F   T + +P+L I  ++   L   +                  +
Sbjct: 370 CSIYRAEHPLAIAAEFFIDTVRGIPMLVIILYVGLPLSGAI-----------------KS 412

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G+          +A+S   +A++AEI R+G++AVP+GQ+EAA +LGL+  +  R V+
Sbjct: 413 ASDGAINLSNMTRGIVAISIGYSAYMAEIFRAGILAVPKGQIEAARSLGLSRWQVARFVV 472

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+  +IPPL ++++ +LK++SL   +   D+          +            +Y+
Sbjct: 473 LPQALSIVIPPLGNEFIAMLKDTSLLSILSVRDVTQRMREFQASSFLPFAPFNSAAILYV 532

Query: 376 SLSIMIALFMNRLNAKIALK 395
            L++  A  +  +  +   K
Sbjct: 533 VLTLGAASIIKSIERRYERK 552


>gi|260769494|ref|ZP_05878427.1| amino acid ABC transporter permease protein 3-TM
           region,His/Glu/Gln/Arg/opine [Vibrio furnissii CIP
           102972]
 gi|260614832|gb|EEX40018.1| amino acid ABC transporter permease protein 3-TM
           region,His/Glu/Gln/Arg/opine [Vibrio furnissii CIP
           102972]
          Length = 238

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 5/213 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QL 244
             + + +  +G+VL      LS     K  +    +Y  T ++ GLP L+ + + Y    
Sbjct: 26  LGLALCALPVGMVLGTGVAALS-ISKHKGHRWFATVY--TTVLRGLPELLTLFIIYHGVG 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L  F+   G      F +  IAL    + + AE++R    A+ +GQ EA  +L 
Sbjct: 83  LLINKTLKWFDPSNGFFELNPFGAGVIALGLVFSGYAAEVLRGAWKAMDKGQREAGYSLA 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +   L+  PQ +R  +P L + ++NLLK+++L   +   DL+      +  T +  
Sbjct: 143 MGRGQIFWLIERPQLLRLALPGLGNLWINLLKDTALVSVIALDDLMRAANIAVGATKKPF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              L     Y ++ +     +  +  +     +
Sbjct: 203 LFYLTVCLAYWAVCVCCERVLAAMEVRSKRGIR 235



 Score = 54.6 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 68/193 (35%), Gaps = 7/193 (3%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           DS +   +L G   T  LA   +    ++GT V A  +S +K   W   VY  V R +P 
Sbjct: 11  DSGWGDELLKGLAITLGLALCALPVGMVLGTGVAALSISKHKGHRWFATVYTTVLRGLPE 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ +F +Y  V  ++           G F                A   VFS     VL 
Sbjct: 71  LLTLFIIYHGVGLLINKTLKWFDPSNGFFE------LNPFGAGVIALGLVFSGYAAEVL- 123

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
             A +       + G +L +     F +   P L+ +AL    +    +L     +    
Sbjct: 124 RGAWKAMDKGQREAGYSLAMGRGQIFWLIERPQLLRLALPGLGNLWINLLKDTALVSVIA 183

Query: 262 VSPEFMSLYIALS 274
           +     +  IA+ 
Sbjct: 184 LDDLMRAANIAVG 196


>gi|227112140|ref|ZP_03825796.1| octopine transport system permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|227326809|ref|ZP_03830833.1| octopine transport system permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 238

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 4/241 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +         F  +       +       + +  F+LG V+       S+    +  + 
Sbjct: 1   MEDVTFWQLISFGEHGWGKLLLIGAGMTLALAIGGFLLGAVIGTIG-AWSKICGNRPVRY 59

Query: 219 LPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           L   Y  T LI G+P L++I  L +       +L +          P F++  IA+   +
Sbjct: 60  LADGY--TTLIRGVPDLLIIYLLYFGGSSALTLLAKLFGSNEFFGFPGFLAGVIAVGISS 117

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A   E+ R    AV +G++EAA A G+      R +++P  +R  IPPL + +  +LK 
Sbjct: 118 GAQQTEVYRGAFYAVSKGEIEAAKACGMPTLLRLRRIIIPLLLRHAIPPLGNVWQLVLKT 177

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           S+L    G A+L++   T    TG+  +  +    +YL++SI     M R  +  +   K
Sbjct: 178 SALVSVTGVAELLTQAQTGAGSTGKPFDFFMAAALLYLAISICSGWIMRRAESHYSRGVK 237

Query: 398 K 398
           +
Sbjct: 238 R 238



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 35/71 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+G   T  LA  G +   +IGT+    ++  N+ V ++   Y  + R +P L++
Sbjct: 17  WGKLLLIGAGMTLALAIGGFLLGAVIGTIGAWSKICGNRPVRYLADGYTTLIRGVPDLLI 76

Query: 145 IFFLYKSVLSV 155
           I+ LY    S 
Sbjct: 77  IYLLYFGGSSA 87


>gi|315039015|ref|YP_004032583.1| amino acid ABC transporter, permease protein [Lactobacillus
           amylovorus GRL 1112]
 gi|325957440|ref|YP_004292852.1| amino acid ABC transporter permease [Lactobacillus acidophilus
           30SC]
 gi|312277148|gb|ADQ59788.1| Amino acid ABC transporter, permease protein [Lactobacillus
           amylovorus GRL 1112]
 gi|325334005|gb|ADZ07913.1| amino acid ABC transporter, permease protein [Lactobacillus
           acidophilus 30SC]
          Length = 219

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 15/218 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            IF ++ +L   L +    L      K  K +   Y+  +++ G P L
Sbjct: 14  LPALFSGAGMTLSIFFWTLILATPLGILV-SLGEMSKIKPLKWIVNFYV--WIMRGTPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V P + +   A     AA+ AEI R G  ++ +G
Sbjct: 71  LQLIFVF---YGLPIIH--------IVFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDQG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +    +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 120 QFEAAQVLHLNRWQTMTKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNV 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + +    +  +++   IYL L  + A  + RL    +
Sbjct: 180 AMARD-VTLVPLVLVGVIYLFLISICAFILKRLEKHFS 216



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+  G   T  + F  +I AT +G LV  G +S  K + WI   YV + R  P L+ 
Sbjct: 13  ILPALFSGAGMTLSIFFWTLILATPLGILVSLGEMSKIKPLKWIVNFYVWIMRGTPLLLQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F++  +  +  +        F   LN 
Sbjct: 73  LIFVFYGLPIIHIVFPRYQAALFAFVLNY 101


>gi|330501774|ref|YP_004378643.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328916060|gb|AEB56891.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 230

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 97/185 (52%), Gaps = 1/185 (0%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYI 271
            +  +   L   +   +  L +L L+ + +  +F  P + Q+            F S  I
Sbjct: 46  MRLSRYRALSMFAGGYVNLLRSLPLVLVIFWFYFMVPFVVQWVTGAPRPVRIDPFWSSVI 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
             + + A +  EI+RSG+ ++P+GQ +A++ALG+T R++   V+LPQA+R+++P + +Q 
Sbjct: 106 TFTLFEACYFCEIIRSGIQSLPKGQTQASMALGMTGRQSLFYVVLPQALRNMLPLMLTQT 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L +++SL   +   D +     I  + G+ +E+ +    +Y  +S++ +  + RL  +
Sbjct: 166 IVLFQDTSLVYILSITDFLGAAAKIAQRDGRLLEMYVFAALVYFVISLLASYAVRRLQKR 225

Query: 392 IALKE 396
           +A+  
Sbjct: 226 VAIIR 230


>gi|326795939|ref|YP_004313759.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326546703|gb|ADZ91923.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 516

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 80/148 (54%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + Q     G  +   F++  ++L    AA++AEI R+GL+++ +GQ EA  AL +     
Sbjct: 79  MPQLFPSTGPYLGVPFIAGLVSLVITEAAYMAEIHRTGLLSIGKGQREAGHALSIGFLGV 138

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RL+++PQA+R  +P L ++Y+ ++K SSL  A+  ++++  G  + +Q    +E +L  
Sbjct: 139 QRLIVIPQALRISMPALINEYVTVIKLSSLVSAISLSEILQTGQRLYSQNFLVMETLLAV 198

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
              Y+ +  +    +  +  ++ +  +K
Sbjct: 199 AVYYVGIVTIFGSVLQWIERRMDVPSRK 226


>gi|116252501|ref|YP_768339.1| transmembrane permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115257149|emb|CAK08244.1| putative transmembrane permease component of ABC transporter
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 276

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 7/216 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +   S + G +LSL    ++R  + +   AL   YI  F   G P L  + L Y 
Sbjct: 67  WITLSLVFISVICGAILSLPL-AMARMSNNRVLNALAYGYIYFF--RGTPLLAQLFLVYY 123

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L   +P L              +     A++  TAA+ AEI+R  + +VP GQ EAA A
Sbjct: 124 GLGVFRPQLEAVGIWW--FFREAWYCGLFAMTINTAAYQAEILRGAIESVPHGQREAAAA 181

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+ +  A R ++LPQA    + P  ++ + L+K S++   +   DL+       ++T  
Sbjct: 182 LGIHNSIAFRKIILPQAFIVALRPYGNEIILLIKGSAVVAIITVLDLMGETRYAFSRTFD 241

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  L     YL++   +         ++    K+
Sbjct: 242 Y-QTYLWAAIFYLTIVEALRHLWAWFERRLTRHLKR 276



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L F  +I   I+   +   R+S N+++  +   Y+  FR  P L 
Sbjct: 57  RYGPRYLHGLWITLSLVFISVICGAILSLPLAMARMSNNRVLNALAYGYIYFFRGTPLLA 116

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            +F +Y  +    P  +   +  F       GL   
Sbjct: 117 QLFLVYYGLGVFRPQLEAVGIWWFFREAWYCGLFAM 152


>gi|114707668|ref|ZP_01440563.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536912|gb|EAU40041.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
          Length = 269

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 5/215 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + V SFV G +LS+      R    +T +    L++  F   G P +  I L Y 
Sbjct: 60  WVTVSLVVSSFVCGAILSV-PIAFGRMAESRTARVPSFLFVYFF--RGTPLIAQIFLVYY 116

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F +      +          +      ++  +AA+ AEI+R  + +VP+GQ E   +L
Sbjct: 117 -GFGEFRGFLDSIGLWWFFREAWFCALFTIALNSAAYQAEILRGAIESVPKGQWEGGRSL 175

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++       ++LPQAM   + P  ++ + L+K S++   +   DL  +      +T   
Sbjct: 176 GISRSVIFSRIVLPQAMIVALRPYANELILLIKGSAIVAIITVYDLFGITRQAYARTFD- 234

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +    +YL +  ++    N   A++    ++
Sbjct: 235 FQTYVWAAVLYLVVVEILRRLTNFAEARVTRHMQR 269



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 60/213 (28%), Gaps = 15/213 (7%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T  L  S  +   I+   +  GR++ ++       ++V  FR  P + 
Sbjct: 50  RYGLPYLEGLWVTVSLVVSSFVCGAILSVPIAFGRMAESRTARVPSFLFVYFFRGTPLIA 109

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-------- 195
            IF +Y          D   +  F        L    L         +   +        
Sbjct: 110 QIFLVYYGFGEFRGFLDSIGLWWFFREAWFCALFTIALNSAAYQAEILRGAIESVPKGQW 169

Query: 196 -----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
                LGI  S+  +R+     +    AL        L+     +V I   Y L      
Sbjct: 170 EGGRSLGISRSVIFSRIV--LPQAMIVALRPYANELILLIKGSAIVAIITVYDLFGITRQ 227

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                F   + V    + L +          AE
Sbjct: 228 AYARTFDFQTYVWAAVLYLVVVEILRRLTNFAE 260


>gi|300715447|ref|YP_003740250.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299061283|emb|CAX58392.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 218

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L    L       + + +F  G V++L    + R    +    L   YI  F  
Sbjct: 4   FTDWDILRNLLLAARWTILLSLTAFFGGTVVALPL-VMVRLTRRRWPNRLIRGYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ YT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGIDVSPWTAASLALTFYTSAFLVDIWHGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+P+GQ EA+  LGL   +    V+LPQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 LALPKGQWEASRCLGLNFGQTLFRVVLPQALRIGIAPTVGFAVQVIKGTALASIIGFIEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 170 TKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSRYSQYLEKKF 212



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +     T++   +   RL+  +    + R Y+E+F+  P 
Sbjct: 6   DWDILRNLLLAARWTILLSLTAFFGGTVVALPLVMVRLTRRRWPNRLIRGYIELFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  V                +                 A 
Sbjct: 66  LMQLFLAFFGVALFGIDVSPWTAASLALTFYTSAFLVDIWHGSILAL 112


>gi|300933045|ref|ZP_07148301.1| glutamate transporter permease protein GluD [Corynebacterium
           resistens DSM 45100]
          Length = 312

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 15/256 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V+++   +   +     +       G       L     T+       + + ++G VL L
Sbjct: 34  VLLWVGIRLNGNGQFEAEKWQPFLTGDMWTTYILPGLWGTLKAAVVSIILAIIVGTVLGL 93

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R       + L  + +  F    +P L+L+   YQ+     ++         T 
Sbjct: 94  -----GRLSVVAPVRWLCTIIVEFF--RAIPVLLLMIFAYQVFAIYGLVP--------TK 138

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F ++   L+ Y  + IAEI+RSG+ A+P GQ EAAIALGL+ R+    +LLPQA+ S
Sbjct: 139 HLAFGAVVFGLTMYNGSVIAEILRSGIRALPAGQEEAAIALGLSRRQTMFKILLPQAVAS 198

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P L SQ +  LK+S+L   +G+ ++V  G    +     +  +++   I + ++ +++
Sbjct: 199 MLPALISQMVIALKDSALGYLIGYVEVVRSGLQAASWYKNYLAAMVVVAIIMILVNYLLS 258

Query: 383 LFMNRLNAKIALKEKK 398
               R+  ++     +
Sbjct: 259 RLAERMENQLRAGRAR 274



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 3/222 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+    FE  +   P+ +   + T IL G   T   A   +I A I+GT++G GRLS   
Sbjct: 42  LNGNGQFE-AEKWQPFLTGDMWTTYILPGLWGTLKAAVVSIILAIIVGTVLGLGRLSVVA 100

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
            V W+C + VE FR IP L+++ F Y+       +P   +     +F            +
Sbjct: 101 PVRWLCTIIVEFFRAIPVLLLMIFAYQVFAIYGLVPTKHLAFGAVVFGLTMYNGSVIAEI 160

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LIFGLPTLVLIALK 241
             +    + +      ++L  +R    F     +A+  +  +    ++  L    L  L 
Sbjct: 161 LRSGIRALPAGQEEAAIALGLSRRQTMFKILLPQAVASMLPALISQMVIALKDSALGYLI 220

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             +   +  L   ++      +   +++ + L  Y  + +AE
Sbjct: 221 GYVEVVRSGLQAASWYKNYLAAMVVVAIIMILVNYLLSRLAE 262


>gi|295700416|ref|YP_003608309.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Burkholderia sp. CCGE1002]
 gi|295439629|gb|ADG18798.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. CCGE1002]
          Length = 219

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 99/231 (42%), Gaps = 18/231 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   +    L    +T+       V + V+G+V+++     +R     T      
Sbjct: 2   EWDWSFVREILPILLQGLEITVLATLLGAVVAAVVGMVIAILRLAPNRVVSHGTSAV--- 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                  I G P LV +   + +  D                P   +  +A+  + A + 
Sbjct: 59  ----AGFIRGTPLLVQLYFVFYVLPDI-----------GIRMPALAAGVLAIGVHYATYA 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+G+ ++PRGQ EAA A  L+  +A + V+LP+A+  ++P L +  +++ K + L 
Sbjct: 104 AEVYRAGIESIPRGQWEAAKACNLSPAQAWQHVILPEAVPPMVPALANYLISMFKETPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            A+   +L++    I N   + +E + +   ++L +S++    +  L  + 
Sbjct: 164 SAITVLELMNQAKIIANTDYRYLEPMTLVGVLFLIISLIAVACVRLLEKRF 214


>gi|116513635|ref|YP_812541.1| ABC-type amino acid transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116092950|gb|ABJ58103.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 222

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 15/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + SFV+G+ L L           KT +   ++ +   +I  LP L
Sbjct: 17  LQGFWVTIEVSVISIILSFVIGLALGLIRF---TRIDAKTTRISKVVGVIIDIIRNLPLL 73

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y   F  PV+              F +  IA+  + +A IAE+VRSG++AV  G
Sbjct: 74  LIIFFSY---FGLPVM--------GIRVDAFQASVIAMVVFESAMIAEVVRSGIMAVDPG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + G+T+ +A   V+ PQA+  +IP L SQ+++L+K++SLA  +   +L+     
Sbjct: 123 QMEGARSNGMTYMQAMTHVVFPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEI 182

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I NQ  +  I + L    +Y  +   ++ F N L+ +I 
Sbjct: 183 IYNQNTKYMIPMYLAVAVMYFIICFALSSFANYLSKRIK 221



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----VAWICRVYVEVFR 137
                  +L GF  T  ++   +I + +IG  +G  R +        ++ +  V +++ R
Sbjct: 9   SWINLRFLLQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGVIIDIIR 68

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI 163
           N+P L++IFF Y  +  +    D   
Sbjct: 69  NLPLLLIIFFSYFGLPVMGIRVDAFQ 94


>gi|260904003|ref|ZP_05912325.1| amino acid ABC transporter membrane protein [Brevibacterium linens
           BL2]
          Length = 263

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 21/215 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  FV +  LGI+L+L      +       + +   YI  F       +V +A  Y + +
Sbjct: 66  ALGFVLALSLGILLALM-----KISSVAPYRWIATGYIELFRGLPA-LIVFLAFGYAVPY 119

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              ++++ +AL    +A+IAE +R+GL AVP+GQ EAA +LG++
Sbjct: 120 AF-----------GIRMDTYVTVMLALGIVESAYIAETLRAGLQAVPKGQFEAARSLGMS 168

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   +++PQA R I+PPLT++ + + K+SSL   +G      +L   G   I+    
Sbjct: 169 HSRAMITIVIPQAFRIILPPLTNEIILMTKDSSLIYILGLTAAQYELTKFGREAISNPEA 228

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +++    YL ++I + +   R  ++ A  +K
Sbjct: 229 GLTPLVVAGVCYLIITIPLGMLARRFESRTAKIKK 263



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             NT      G + A  +G L+   ++S+     WI   Y+E+FR +P L+V      +V
Sbjct: 58  LFNTIIYTALGFVLALSLGILLALMKISSVAPYRWIATGYIELFRGLPALIVFLAFGYAV 117

Query: 153 LSVL 156
               
Sbjct: 118 PYAF 121


>gi|327394607|dbj|BAK12029.1| histidine transport system permease protein HisM [Pantoea ananatis
           AJ13355]
          Length = 238

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 94/224 (41%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTF 227
           +    + L +      T   I ++  ++ +VL      L         + + L +++ T+
Sbjct: 5   IHEYWKSLLWTDGYRFTGVAITLWLLIVSVVLGGCMAVLLAIARVSPNRFISLPVWLFTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + + Y   +   ++     +  +          +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLVFYSGMYTLEIVKGTELL-NAFFRSGLNCTLLAFTLNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + AVP G++EAA A G +  K  R ++LP A+R+ +P  +++ + +L +++LA      
Sbjct: 124 AIRAVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPVYSNEVILMLHSTALAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+ +   I   T Q      I   +YL +S ++         +
Sbjct: 184 DLLKIARDINAATYQPFTAFGIAAVLYLIISYVLISLFRLAERR 227



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL    ++    +  L+   R+S N+ ++    ++  VFR  P  V +   Y
Sbjct: 20  FTGVAITLWLLIVSVVLGGCMAVLLAIARVSPNRFISLPVWLFTYVFRGTPLYVQLLVFY 79

Query: 150 KSVLSVLP 157
             + ++  
Sbjct: 80  SGMYTLEI 87


>gi|146307937|ref|YP_001188402.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145576138|gb|ABP85670.1| L-ornithine ABC transporter membrane protein / L-arginine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 229

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 4/203 (1%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLHFDKP--VLGQF 254
           + +++F   L   F     + L +L      +I G+P LVLI L +    D    V    
Sbjct: 24  MAVAIFLGLLGAAFRLSPVRWLAMLGEAYATVIRGIPDLVLILLIFYGGQDIVNRVAPLL 83

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            +     ++P F++    +     A+++E  R   +A+P+GQ EA  A G++  +    +
Sbjct: 84  GYDEYIDINP-FVAGVFTMGFIFGAYLSETFRGAFMAIPKGQGEAGAAYGMSGMQVFFRI 142

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T +     L    +Y
Sbjct: 143 LVPQMIRFAIPGFTNNWLVLTKATALISVVGLQDMMFKAKNAADATREPFTFYLAVAALY 202

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L L+ +  L +  L  + ++  K
Sbjct: 203 LVLTSVSLLALRFLEKRYSVGTK 225



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + IL G   T  LA + M  A  +G L  A RLS  + +A +   Y  V R IP LV+
Sbjct: 5   YGSTILDGAWLTLLLALTSMAVAIFLGLLGAAFRLSPVRWLAMLGEAYATVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           I  ++     ++      +     + +N              A +F   F+ G  LS
Sbjct: 65  ILLIFYGGQDIVNRVAPLLGYDEYIDINPFV-----------AGVFTMGFIFGAYLS 110


>gi|324991489|gb|EGC23422.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
 gi|324993849|gb|EGC25768.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324994830|gb|EGC26743.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|325687271|gb|EGD29293.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 226

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-------VLSLFATRLSRHFHEKTGKALPL 221
           M  +               + F+F+  + I       +L +F   +S   H K  + L  
Sbjct: 1   MSFSISSWQAYFADFGKFFQGFLFTLAISIGALALALLLGIFFGAISTGKH-KVLRGLAR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +++        P LV   + +   +  P++  +     + +   + +  + +  Y  A+I
Sbjct: 60  VFVEF--YQNTPLLVQFVIVF---YGLPLVSNY-----TIMPSIYWTAVLCVGLYHGAYI 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++RSG+ ++PRGQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S  
Sbjct: 110 AEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTV 169

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +   DL+ V  +        I        +Y  L   IA +  R+ 
Sbjct: 170 AIISGMDLMFVTKSWSALNSNYIPAFAGAALLYFLLCFPIASWGRRVE 217



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +  A ++G   GA     +K++  + RV+VE ++N P LV    +
Sbjct: 18  FFQGFLFTLAISIGALALALLLGIFFGAISTGKHKVLRGLARVFVEFYQNTPLLVQFVIV 77

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  V        +  
Sbjct: 78  FYGLPLVSNYTIMPSIYW 95


>gi|312171915|emb|CBX80172.1| Arginine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 238

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT------GKALPLLYISTFLIFGLPTLVL- 237
                 V    + +V +++ +   R             +ALP + +  F+ FG   L++ 
Sbjct: 17  LAVCALVAGLFMAMVFAVWESARWRPLAWLASGLVTLFRALPEILVVLFIYFGASQLLIS 76

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           ++  + L      +     I    VSP F+   IAL+   A++ ++ +R  L AVP GQ 
Sbjct: 77  LSDGFTLDLAFVQIPVQINIENFDVSP-FLCGVIALAILYASYASQTLRGALQAVPLGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L   +   D++    +I 
Sbjct: 136 ESGQALGMKKSAIFLRLIVPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     +I   IYL +++     + R+  +    E+
Sbjct: 196 TRTQEPFTWYMIAAAIYLVITLFSQQVLKRIELRATRFER 235



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 35/101 (34%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA   ++    +  +      +  + +AW+    V +FR +P ++V+ F+Y     +
Sbjct: 14  TVGLAVCALVAGLFMAMVFAVWESARWRPLAWLASGLVTLFRALPEILVVLFIYFGASQL 73

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           L        L          ++     +       +   +L
Sbjct: 74  LISLSDGFTLDLAFVQIPVQINIENFDVSPFLCGVIALAIL 114


>gi|307730184|ref|YP_003907408.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307584719|gb|ADN58117.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 229

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 3/212 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V S    ++L L     ++    +  +AL   Y  T LI  +P LVL+ L +    
Sbjct: 18  VELSVLSLATAVLLGLAGAA-AKLSLNRPLRALATGY--TTLIRSVPDLVLMLLLFYSIQ 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F++  + L     A+  E  R   +AVPRGQ+EA  A G++
Sbjct: 75  IAVNNLTDALGLPQFDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMS 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    +L PQ MR  +P + + +  L+K ++L   +G AD+V         T      
Sbjct: 135 GARVFARILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFF 194

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ILI   IYL+L+ +  L +  L  + ++  + 
Sbjct: 195 ILIAALIYLALTTVSNLALIWLERRYSIGVRH 226


>gi|222148129|ref|YP_002549086.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735117|gb|ACM36080.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 219

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 13/185 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R   ++  +     +I  F   G P L+ + + +           F         P +++
Sbjct: 42  RIAKQRMSRIFARGFIEFF--QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+C+TAAF+ EI R  + AVP+GQ EA  +L LT+R+  RL++LPQAMR  I P  
Sbjct: 89  AGVALTCWTAAFLTEIWRGCVEAVPKGQWEAGTSLALTYRQQMRLIILPQAMRIAIAPTA 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K ++L   +GF +L   G  + N T Q   +  +    Y ++   ++ +   L
Sbjct: 149 GFSVQVVKGTALTSIIGFVELSKAGTIVTNATFQPFTVYGLVALFYFAICYPLSRYSKYL 208

Query: 389 NAKIA 393
             +  
Sbjct: 209 ERRFG 213


>gi|296104985|ref|YP_003615131.1| general L-amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059444|gb|ADF64182.1| general L-amino acid transport system permease protein
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 367

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 71/339 (20%), Positives = 132/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ ER G +   G+ P+        A+++G ++         I       L   G+  
Sbjct: 77  WVFIHERFG-QFMYGLYPHEQRWRINLALVIGLLS---------IAVMFWKRLPQRGQ-- 124

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  + P+VV   LY   L +  +                     T
Sbjct: 125 -----------YIACWAVVYPIVVWVLLYGGFLGLERVETRQ-------------WGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +   GI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 161 LTLIIASVGIAGALPWGILLAL-----GRRSKMPVVRVLSVIFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 361 ---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 326 VWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 364


>gi|166030980|ref|ZP_02233809.1| hypothetical protein DORFOR_00661 [Dorea formicigenerans ATCC
           27755]
 gi|166029247|gb|EDR48004.1| hypothetical protein DORFOR_00661 [Dorea formicigenerans ATCC
           27755]
          Length = 216

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 19/215 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   +FS  LG+++S       R    K    +  LYIS  ++ G P ++ + + Y 
Sbjct: 19  WIFAATLIFSLPLGLLISF-----GRMSKNKIISTIFKLYIS--VMRGTPLMLQLMVIYF 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEF--MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             F         +I G  +S  +  M++ I      AA+ AEI R G+ ++P+GQ EAA 
Sbjct: 72  GPF---------YILGVQISQSWKNMAVAIGFVLNYAAYFAEIYRGGIESMPQGQYEAAK 122

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            LG T  +    ++LPQ ++ I+P +T++ + L+K++SLA  +G  ++ ++   + +   
Sbjct: 123 ILGYTKAQTFIRIILPQVIKRILPAITNETITLVKDTSLAFTIGVTEMFTMAKALASG-Q 181

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++         Y  L++++A  M R+  K+    
Sbjct: 182 VSMLPYAFAALFYYILNLVVAFIMERIEKKMNYYR 216



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 35/60 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V + W+  + +I +  +G L+  GR+S NK+++ I ++Y+ V R  P ++ +  +Y  
Sbjct: 13  GMVTSLWIFAATLIFSLPLGLLISFGRMSKNKIISTIFKLYISVMRGTPLMLQLMVIYFG 72


>gi|114565875|ref|YP_753029.1| putative ABC transporter permease [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114336810|gb|ABI67658.1| putative ABC transporter permease protein [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 213

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 15/224 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      L      +    K+F  + V+ + L +    ++R       +     Y+  F 
Sbjct: 1   MDYIIMLLPSMLKGLTVTLKLFSITLVMALPLGVIMG-MARISSFSPLRWFMEFYVWLF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P L+ +   Y           F  +         M+ Y+A     +A++AEI R+G
Sbjct: 59  -RGTPLLLQLLFMY-----------FGLMTLGLRLEREMAAYLAFVLNYSAYLAEIFRAG 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ RGQ EAA  LGL+  +    ++LPQ  + ++PP+ ++ +NL+K+++L   +  ++
Sbjct: 107 IQSIDRGQYEAADVLGLSRYQTMTNIILPQVFKRVLPPIGNEVINLVKDTALVYVLAISE 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L  V  T + +        LI    YL ++ M+  F   +  + 
Sbjct: 167 LSRVARTHVMRD-DTFIPFLIAAIFYLMMTGMVQRFFKWVELRY 209



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L    ++ A  +G ++G  R+S+   + W    YV +FR  P L+ + F+
Sbjct: 11  MLKGLTVTLKLFSITLVMALPLGVIMGMARISSFSPLRWFMEFYVWLFRGTPLLLQLLFM 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  ++++    +  +       LN 
Sbjct: 71  YFGLMTLGLRLEREMAAYLAFVLNY 95


>gi|332041716|gb|EGI78068.1| polar amino acid abc transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 255

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 11/232 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVF--SFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           L FG      G             +     + V+G V+ +  T L  + H    +   L 
Sbjct: 22  LGFGRDQTYLGWLIEAWGQTVLVAVLSLCVALVIGTVIGVLRT-LPNNVHGHPSRLARLA 80

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +       +P LV + L Y                    +P+ + + + L  +T++ IA
Sbjct: 81  NVWVEFFRNIPLLVQVILWY--------HVVPVVFPVFADTPKLLLVVMGLGFFTSSRIA 132

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G+ A+PRGQ  A +ALG +  +  R VLLP A R I+PPLTS+ +N+ KNSS+A 
Sbjct: 133 EQVRTGIQALPRGQRYAGMALGFSTWQTYRYVLLPMAFRIIVPPLTSESMNIFKNSSVAF 192

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           AV   +L         +T + IE+ L    +Y+  +  I   M  +  ++ +
Sbjct: 193 AVSITELTFFAQQAGEETSRGIEVYLAVTLLYVISAFAINRIMAAIEKRVRV 244



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL------VAWICRVY 132
           +  D +Y   ++  +  T  +A   +  A +IGT++G  R   N +      +A +  V+
Sbjct: 24  FGRDQTYLGWLIEAWGQTVLVAVLSLCVALVIGTVIGVLRTLPNNVHGHPSRLARLANVW 83

Query: 133 VEVFRNIPPLVVIFFLY 149
           VE FRNIP LV +   Y
Sbjct: 84  VEFFRNIPLLVQVILWY 100


>gi|228937880|ref|ZP_04100508.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228970761|ref|ZP_04131401.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228977336|ref|ZP_04137731.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228782313|gb|EEM30496.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis Bt407]
 gi|228788886|gb|EEM36825.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821786|gb|EEM67786.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar berliner ATCC 10792]
          Length = 214

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 19/215 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYTKIPVVSQVLGVVVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           I  Q     I   ++   +Y  ++  +++   RL 
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLE 212



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQVLGVVVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|86357909|ref|YP_469801.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282011|gb|ABC91074.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 216

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 13/194 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L R    +  + +   YI+ F   G P L+ + + Y                     
Sbjct: 36  LIALVRTSKNRFARFVSSGYIALF--QGTPLLMQLFVVYY-----------GVALLGVDV 82

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             ++++ IA + + +AF+ EI R  + AVP+GQ EAA ALGL +    + V+LPQA++  
Sbjct: 83  NAWIAVAIAFTLHASAFLGEIWRGSIEAVPKGQTEAANALGLHYISRMKDVVLPQALKIS 142

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P      + L+K +SLA  VGF +L   G  I NQT + + +  I   +Y  +   ++ 
Sbjct: 143 MPATIGFLVQLIKGTSLAAIVGFIELTRAGQIISNQTYRPLLVFGIVGMVYFIICWPLSH 202

Query: 384 FMNRLNAKIALKEK 397
             + L  ++A   +
Sbjct: 203 IGSGLEKRMARAVR 216



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LAF G +   + G L+   R S N+   ++   Y+ +F+  P L+ +F +
Sbjct: 12  LLQGLKWTVLLAFIGFVGGGVFGILIALVRTSKNRFARFVSSGYIALFQGTPLLMQLFVV 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  V  +    +  I +     L+              A
Sbjct: 72  YYGVALLGVDVNAWIAVAIAFTLHASAFLGEIWRGSIEA 110


>gi|329296884|ref|ZP_08254220.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 221

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 18/214 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + S + G +L++   R SR +       L LL +   L   LP LV+I L Y 
Sbjct: 22  QLCLVAALCSLLWGALLAVLLMRASRFW-------LRLLNLYRGLTLALPLLVVIYLLYF 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  +  +      +G            +AL+ Y A +IA+++RS + A+P+GQ EA   L
Sbjct: 75  VLPEYDITLSSPVVG-----------VLALTLYYAPYIAQVIRSAIDALPKGQWEACRVL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V+LPQ +  ++ PL      L+K+S+L   V   + +      I+ T   
Sbjct: 124 GLSRSEQLRDVVLPQTLPQMLSPLVGLMTVLIKDSALLSIVSVQEFMYAAKQAISDTYAP 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +EI L     Y  L+ +I      L +++    +
Sbjct: 184 LEIYLTVALCYWLLNSVIDWLARGLESRMTRYRR 217


>gi|261821246|ref|YP_003259352.1| arginine transporter permease subunit ArtQ [Pectobacterium wasabiae
           WPP163]
 gi|261605259|gb|ACX87745.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 238

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 10/224 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPT 234
               + V + VLG+VL++          +             + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALVLGLVLAMLFAVWETVRWKAVSWTGTAVVTLLRGLPEILVVLFIYFGSSQ 72

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+++           V        G      F+   IAL+   AA+ ++ +R  L AVP+
Sbjct: 73  LLMMLADGFTLNLLIVQIPVKLDIGMFEISPFLCGVIALALLYAAYASQTLRGALKAVPQ 132

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    
Sbjct: 133 GQWESGQALGLSKAAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTK 192

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I  +T +     ++   IYL ++++    + R++      E++
Sbjct: 193 SIATRTQEPFTWYVVAAAIYLVITLLSQYVLKRIDLHTTRFERR 236


>gi|167837859|ref|ZP_02464742.1| hypothetical protein Bpse38_15327 [Burkholderia thailandensis
           MSMB43]
          Length = 246

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 110/238 (46%), Gaps = 4/238 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++V+ +V+      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLMSGFWVTIKVSLAAWVIALVVGSLFGVL-RTMPSK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    PV            +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFIWYLVVPELLPVSIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + +K
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLIVMAFMRWVESK 236



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 48/95 (50%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++ +  + A ++G+L G  R   +K ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLMSGFWVTIKVSLAAWVIALVVGSLFGVLRTMPSKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP+   + +
Sbjct: 67  TVYVSIFRNIPLIVQFFIWYLVVPELLPVSIGTWI 101


>gi|306841172|ref|ZP_07473888.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306845330|ref|ZP_07477905.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306274246|gb|EFM56058.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306288798|gb|EFM60116.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 215

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 14/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +                   I V    LG+V+       +        + L  L++S
Sbjct: 1   MFSISTFLDSFGPLFWAARYTLLISVLGIALGLVIGALVCA-AALSRVAWLRRLAALWVS 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G+P LV + L Y L                   P  ++  + +    +A+I+EI 
Sbjct: 60  F--LRGVPLLVQLLLFYYL-----------LPVIGIDVPALVAAVVTVGICASAYISEIW 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++A+P+GQ EAA A+G+  R     V+LPQA    +P L ++ + L+K SSL   VG
Sbjct: 107 RGAIVALPKGQSEAATAIGMGPRDIWVRVVLPQAFTMSLPALVNELILLVKASSLVSVVG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L          T + +E+ L    IYL +++ +A     L  +
Sbjct: 167 ILELTRASQAQAAMTFRPLEVYLAAACIYLLINLCLAALGRYLEHR 212



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++  G+    +IG LV A  LS    +  +  ++V   R +P LV +   Y  +  +
Sbjct: 21  TLLISVLGIALGLVIGALVCAAALSRVAWLRRLAALWVSFLRGVPLLVQLLLFYYLLPVI 80

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                  +     + +               A 
Sbjct: 81  GIDVPALVAAVVTVGICASAYISEIWRGAIVAL 113


>gi|292487348|ref|YP_003530220.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292898593|ref|YP_003537962.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198441|emb|CBJ45549.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552767|emb|CBA19812.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
 gi|312171454|emb|CBX79712.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 218

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L    L       + V +F+ G +++L   RL R    +    L   Y   F  
Sbjct: 4   FTDWDILRNLLLAARWTMALSVTAFIGGTLVALPLVRL-RLAGHRWPNRLIRAYAELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+CYT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGLDLSPWAAAALALTCYTSAFLLDIWYGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA   LGL   +    V+LPQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 KALPKGQWEACRCLGLGIGQTLFRVVLPQALRIGIAPTVGFAVQVVKGTALASIIGFIEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 170 TKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSRYSQYLEKKF 212



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 34/107 (31%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +  I  T++   +   RL+ ++    + R Y E+F+  P 
Sbjct: 6   DWDILRNLLLAARWTMALSVTAFIGGTLVALPLVRLRLAGHRWPNRLIRAYAELFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  V                +                 A 
Sbjct: 66  LMQLFLAFFGVALFGLDLSPWAAAALALTCYTSAFLLDIWYGSIKAL 112


>gi|167841347|ref|ZP_02468031.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia thailandensis
           MSMB43]
          Length = 294

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 1/231 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            FL+   LS    T+   A   +F F LG+ L+L     S          + +      +
Sbjct: 5   WFLSGPVLSGLARTLLLTALGALFGFALGVPLALARVSRSPLLAACAWAFIWMFRSIPLV 64

Query: 229 IFGLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  L    L  L   +    P     F  +  + +   F +  + L+   AAF AE +R 
Sbjct: 65  VLLLILNNLGYLYDHVWLGVPFTGITFADVATADLISPFCAAVLGLTLNHAAFAAEGIRG 124

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+++V +GQ+EAA ALGL   +    ++LPQAMR+ +P   +  ++L K +S+   +   
Sbjct: 125 GILSVDQGQLEAAAALGLPRVRQATRIVLPQAMRAFLPVAFNDLISLAKGTSMVYVLAMP 184

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L      I  +  + I ++++    YL +  ++++   ++  + A    +
Sbjct: 185 ELFYTVQVIYRRNLEVIPLLMVATVWYLIILTVLSIVQAQVERRYARGAVR 235


>gi|153011068|ref|YP_001372282.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562956|gb|ABS16453.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 218

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 18/236 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++ PFG       +     T+  +A  FV   + G++++L      R    +  + + L 
Sbjct: 1   MIRPFGWNEFLIIVYAAQWTIALSAIAFVGGGIGGLLVALM-----RVSDARAPRYIALG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I  F   G P L+ + L +           F           +++  IAL+ + +AF+ 
Sbjct: 56  FIRLF--QGTPLLMQLFLVF-----------FGLNIFGLGINPWIAATIALTLHASAFLG 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + AVP GQ EAA ALGL +    R V+LPQA R  + P     + L+K +SLA 
Sbjct: 103 EIWRGCIDAVPPGQREAATALGLRYYNRMRYVILPQAARISVAPTVGFLVQLIKGTSLAA 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +GF +L   G  I N T     +      +Y  L   +++   R+  + +    +
Sbjct: 163 IIGFTELTRQGQIINNATFSPFMVFGTVAAVYFVLCWPLSILARRMETRFSRATAR 218


>gi|330815542|ref|YP_004359247.1| hypothetical protein bgla_1g05980 [Burkholderia gladioli BSR3]
 gi|327367935|gb|AEA59291.1| hypothetical protein bgla_1g05980 [Burkholderia gladioli BSR3]
          Length = 246

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++V+ +++      L R   ++
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLAAWVIALIVGSLFGVL-RTVQDR 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  LY+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  RLSAIGTLYVSIF--RNIPLIVQFFVWYLVVPELLPASIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTEWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + AK  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMAFMRWVEAKTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 47/95 (49%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L GF  T  ++ +  + A I+G+L G  R   ++ ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLAAWVIALIVGSLFGVLRTVQDRRLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            +YV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TLYVSIFRNIPLIVQFFVWYLVVPELLPASIGTWI 101


>gi|255527439|ref|ZP_05394312.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296187468|ref|ZP_06855863.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255508885|gb|EET85252.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296047990|gb|EFG87429.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 235

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 105/235 (44%), Gaps = 5/235 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +             +     I + S  +G+V+ L    + R  +    K +  +++
Sbjct: 1   MNFDIQFAINTFPKILKAVPMTLSISIVSIAIGLVIGLII-AICRTNNIPILKTICAVFV 59

Query: 225 STFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           S   I G P +V + + +         +     +              IA +   AA+++
Sbjct: 60  SF--IRGTPIIVQLYVVFYGFPELLTYLHQSLGWKVSPNGISHISIALIAFTLNAAAYLS 117

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RS L +V +GQ+EAA ++G+T  +A R ++LPQA+ + +P  ++ ++ + K++SLA 
Sbjct: 118 ENIRSALSSVNKGQLEAAYSIGMTSFEAYRRIILPQALVAALPNFSNVFIQITKDTSLAF 177

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +V   ++++V         + +E  L    IY  +  + A     L  ++ + +K
Sbjct: 178 SVMVVEIMAVSSVEAASGYKYLEAYLDAAIIYFIVCYIFAKLFTALENRLKVYKK 232


>gi|241114114|ref|YP_002973589.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240868687|gb|ACS66345.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 245

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 4/215 (1%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
                +     I + S+ L + L      ++R   ++  +     Y+  F     P LV 
Sbjct: 24  MLLTGLGWTLLISLLSWTLALALGTLFG-VARTLPQRWVRWPSAAYVHCF--RNTPLLVQ 80

Query: 238 IALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           + L +  L    PV         +    +F+++ + L+ Y+AA  AE +R+G+ ++  GQ
Sbjct: 81  LFLWFYVLPELLPVDWGNAIKQMNPTLNQFLTVVLCLTLYSAAKCAEQIRAGIESIAAGQ 140

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
             A +ALGL+     R V+LPQA R IIPPLTS ++N+ KNS++A+ +G  +L      +
Sbjct: 141 RAAGLALGLSTGGIYRHVILPQAFRIIIPPLTSDFMNVFKNSAVALTIGLMELTGQSRQL 200

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              + Q  E  L    IY+ +++++   M+ + A+
Sbjct: 201 SEFSAQPFESFLAATVIYMLVTLLVVWLMHVIEAR 235



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 32/76 (42%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           ++      A  +GTL G  R    + V W    YV  FRN P LV +F  +  +  +LP+
Sbjct: 35  ISLLSWTLALALGTLFGVARTLPQRWVRWPSAAYVHCFRNTPLLVQLFLWFYVLPELLPV 94

Query: 159 PDHSIVLPFGMFLNNR 174
              + +      LN  
Sbjct: 95  DWGNAIKQMNPTLNQF 110


>gi|56697223|ref|YP_167588.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
 gi|56678960|gb|AAV95626.1| amino acid ABC transporter, permease protein [Ruegeria pomeroyi
           DSS-3]
          Length = 375

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 14/250 (5%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +++   +P  ++++  G F            +  +  + +   ++ I L +    L RH+
Sbjct: 137 IVAWAVLPIFALIMIGGAFGMQEVDQSLWGGLMLSVLLALVGVIVSIPLGVLL-ALGRHY 195

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                KA+ + +I       L T++ +A      F  P L   N           + + I
Sbjct: 196 GSPAVKAICVAFIELVRGVPLITILFMASVMMPLFLPPDLVINN----------LLRIQI 245

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  +++A++AE+VR GL A+P+GQ EA++ALG++  +    V++PQA+R ++PPL  + 
Sbjct: 246 GMILFSSAYMAEVVRGGLQAIPKGQTEASLALGVSPARTIIFVVVPQALRHVLPPLIGRC 305

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + L K++SL + VG  D + +           G   E  +   F+Y  +   ++L+   L
Sbjct: 306 IALFKDTSLVIIVGLLDFLGMVRGAALDPEWLGFQAEAYVFAAFVYWLICYSLSLYGRAL 365

Query: 389 NAKIALKEKK 398
             +     K+
Sbjct: 366 ERRGPAGSKR 375



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 75/205 (36%), Gaps = 14/205 (6%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            ++  G + +  LA  G+I +  +G L+  GR   +  V  IC  ++E+ R +P + ++F
Sbjct: 162 QSLWGGLMLSVLLALVGVIVSIPLGVLLALGRHYGSPAVKAICVAFIELVRGVPLITILF 221

Query: 147 FLYKSVLSVLPI---PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLG--- 197
                +   LP     ++ + +  GM L +       +     A        S  LG   
Sbjct: 222 MASVMMPLFLPPDLVINNLLRIQIGMILFSSAYMAEVVRGGLQAIPKGQTEASLALGVSP 281

Query: 198 ---IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
              I+  +    L        G+ + L +  T L+  +  L  + +      D P    F
Sbjct: 282 ARTIIFVVVPQALRHVLPPLIGRCIAL-FKDTSLVIIVGLLDFLGMVRGAALD-PEWLGF 339

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAA 279
                   +  +  +  +LS Y  A
Sbjct: 340 QAEAYVFAAFVYWLICYSLSLYGRA 364


>gi|260597203|ref|YP_003209774.1| glutamine ABC transporter permease [Cronobacter turicensis z3032]
 gi|260216380|emb|CBA29430.1| Glutamine transport system permease protein glnP [Cronobacter
           turicensis z3032]
          Length = 219

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    +            I +     GIV+ L A  L+R +       + L++I
Sbjct: 1   MEFDWSVIWPAIPILLDGAKMTLWISILGLAGGIVIGLLAG-LARSYGGWIANHIALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +     ++F  P+               F +  I +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVM---YIYFALPMAFP------DIRIDTFTAAVITIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++P L +Q +  +K++SL + +
Sbjct: 109 TRGSVLSIHKGFSEAGLALGLSRRETIRHVIMPLALRRMLPALGNQLIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      IYL ++ ++ + +  L  ++ +
Sbjct: 169 GAAELTRSGQEIIAGNFRALEIWTAVGVIYLIITQVLNIVLRILERRMKI 218



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 3/154 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W++  G+    +IG L G  R     +   I  V++E+ R  P +V + ++
Sbjct: 15  LLDGAKMTLWISILGLAGGIVIGLLAGLARSYGGWIANHIALVFIEIIRGTPIVVQVMYI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-LGIVLSLFATRL 207
           Y ++    P           + +     ++       +       F   G+ L L     
Sbjct: 75  YFALPMAFPDIRIDTFTAAVITIMINSGAYIAEITRGSVLSIHKGFSEAGLALGLSRRET 134

Query: 208 SRHFHEKTG--KALPLLYISTFLIFGLPTLVLIA 239
            RH        + LP L     +     +L ++ 
Sbjct: 135 IRHVIMPLALRRMLPALGNQLIISIKDTSLFIVI 168


>gi|16801504|ref|NP_471772.1| hypothetical protein lin2442 [Listeria innocua Clip11262]
 gi|16414964|emb|CAC97669.1| lin2442 [Listeria innocua Clip11262]
          Length = 238

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +          +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVIL-SLPRIYQIPVLNQFARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSGVFGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL  R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSVGLNGRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYITAVLLEYSFKWIEKRVKKENTR 229



 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 34/75 (45%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G ++   R+    ++    RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVILSLPRIYQIPVLNQFARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             +    +     ++
Sbjct: 84  SGVFGIDLSQMDPLY 98


>gi|186476915|ref|YP_001858385.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193374|gb|ACC71339.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 229

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 74/175 (42%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I T LI G+P LVL+ L +                       F++    L     A+  E
Sbjct: 52  IYTTLIRGVPDLVLMLLLFYSIQIWLNNLTDMLGWDQIDIDPFVAGVAVLGFIYGAYFTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EA  A G+T  +    ++ PQ MR  +P + + +  ++K ++L   
Sbjct: 112 TFRGAFLAVPRGQLEAGAAYGMTGWQVFSRIMFPQMMRFALPGIGNNWQVMVKATALVSI 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G AD+V         T +     L+   IYL ++      +  L  + +   +K
Sbjct: 172 IGLADVVKASQDAGKGTLRFFFFTLMAGAIYLLITTASNFVLMYLEKRYSTGVRK 226


>gi|187929543|ref|YP_001900030.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|241663662|ref|YP_002982022.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|309781682|ref|ZP_07676415.1| glutamine ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|187726433|gb|ACD27598.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|240865689|gb|ACS63350.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|308919323|gb|EFP64987.1| glutamine ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 230

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 18/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             N  L    LT    +   V +   GI+L L           +      L + +T L++
Sbjct: 17  YPNGPLGGLALTFLLASAGLVLALPAGIILGLC----------RVSPIAALRWPATALVY 66

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +    L+ + +  +F  P +           + +F ++  AL  +  A++AEIVR+G+ 
Sbjct: 67  VVRGTPLLMVIFWAYFLLPSVTG-------QRTDQFSTMLTALVIFDGAYLAEIVRAGIQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +PRGQME+A +LGL++ +A R V+LPQA+R+++P L +Q ++ +K +SL   +   ++ 
Sbjct: 120 GLPRGQMESARSLGLSYMQAMRRVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVS 179

Query: 351 SVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            V G I      ++ E+  +    Y  +   +      L  ++A +
Sbjct: 180 FVAGQISTAVMVKSAEVYGLLGISYFIMCFSLTRVAFYLERRLAAR 225



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 39/96 (40%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ Q    Y     Y    L G   TF LA +G++ A   G ++G  R+S    + W   
Sbjct: 3   DLIQTYGIYYLIGQYPNGPLGGLALTFLLASAGLVLALPAGIILGLCRVSPIAALRWPAT 62

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
             V V R  P L+VIF+ Y  + SV           
Sbjct: 63  ALVYVVRGTPLLMVIFWAYFLLPSVTGQRTDQFSTM 98


>gi|116492195|ref|YP_803930.1| ABC-type amino acid transport system, permease component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116102345|gb|ABJ67488.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pediococcus pentosaceus ATCC 25745]
          Length = 218

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 19/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T++ +    + S++LG +L        ++F    G          F+I  +
Sbjct: 14  MFLLKGLWITVEVSVISIILSYILGGILGFIRYMRIKYFSAIVG----------FIIDLI 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L LI + + ++F  P LG    I          S  +AL+ + +A +AEI+R G+ ++
Sbjct: 64  RNLPLILIFFFVYFGLPNLGLRIEI--------IPSSILALTVFESAMLAEIIRGGIESI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQME A A GLT+ +A R ++LPQA   +IP L SQ+++L+K++SLA  +   +L+  
Sbjct: 116 SKGQMEGARANGLTYWQAMRYIILPQAQVRMIPALVSQFISLIKDTSLATIIMLPELMYH 175

Query: 353 GGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              I  Q T   I + +    +Y  +   ++LF   L  +IA
Sbjct: 176 AQIIYGQNTNYIIPMFVALAVMYFIVCYALSLFSRYLEKRIA 217



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 36/70 (51%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  ++   +I + I+G ++G  R    K  + I    +++ RN+P +++ 
Sbjct: 13  LMFLLKGLWITVEVSVISIILSYILGGILGFIRYMRIKYFSAIVGFIIDLIRNLPLILIF 72

Query: 146 FFLYKSVLSV 155
           FF+Y  + ++
Sbjct: 73  FFVYFGLPNL 82


>gi|91763206|ref|ZP_01265170.1| ABC transporter permease component [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91717619|gb|EAS84270.1| ABC transporter permease component [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 246

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 7/173 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L YI+   +  +  + L+ L   +++  P++   +F         F+S  IAL+   +AF
Sbjct: 76  LTYINIGYVEIVRAIPLLVLILWIYYGLPIMTGLSF-------SPFVSGIIALAISESAF 128

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI R+G+ ++ + Q EA  +LGLT  K  RLV+LPQA+++I+P L +Q++ +LK SSL
Sbjct: 129 QAEIFRAGINSIKKSQWEAGSSLGLTFYKRLRLVILPQAIKNILPALGNQFVYVLKMSSL 188

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +G  DL      ++  T + +EI    +  YL L ++++  + +   K+ 
Sbjct: 189 VSIIGIGDLTRKANELVVSTYRPLEIYTFLILEYLILILIVSFIVRKFEKKLK 241



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 41/81 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L G   T +++   +I + I+G +V    L+ NK + +I   YVE+ R IP LV
Sbjct: 35  TNLKFLLSGLTTTIYISVVSIIISAILGFIVAIPSLAKNKFLTYINIGYVEIVRAIPLLV 94

Query: 144 VIFFLYKSVLSVLPIPDHSIV 164
           +I ++Y  +  +  +     V
Sbjct: 95  LILWIYYGLPIMTGLSFSPFV 115


>gi|238854963|ref|ZP_04645293.1| glutamine ABC transporter, permease/substrate-binding protein
           [Lactobacillus jensenii 269-3]
 gi|260664248|ref|ZP_05865101.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii SJ-7A-US]
 gi|282931674|ref|ZP_06337167.1| probable amino-acid ABC transporter permease protein [Lactobacillus
           jensenii 208-1]
 gi|313472443|ref|ZP_07812935.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus jensenii 1153]
 gi|238832753|gb|EEQ25060.1| glutamine ABC transporter, permease/substrate-binding protein
           [Lactobacillus jensenii 269-3]
 gi|260562134|gb|EEX28103.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus jensenii SJ-7A-US]
 gi|281304285|gb|EFA96394.1| probable amino-acid ABC transporter permease protein [Lactobacillus
           jensenii 208-1]
 gi|313449147|gb|EEQ69141.2| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus jensenii 1153]
          Length = 220

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 15/224 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L F    +    ++ + S VL  ++ L    L    + K      ++ +   +I 
Sbjct: 8   YSPTNLRFLLEGLLVTVEVSIISIVLSYIIGLI---LGTIRYMKIKYISAVVGLIIDIIR 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LP L++I   Y           F F      +  F +   AL  + +A +AEIVR G+ 
Sbjct: 65  NLPLLLIIFFTY-----------FGFPELGIHATPFWAAISALVIFESAMLAEIVRGGIK 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQME A + G+T+ +A   V++PQAM  ++P L SQ+++L+K++SLA  +   +L+
Sbjct: 114 AVPEGQMEGARSNGMTYLQAMCHVIMPQAMHMMMPALLSQFVSLVKDTSLATIIILPELL 173

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I +Q T   I + LI   +Y  +   ++LF  RL  K+ 
Sbjct: 174 YHAQIIYSQNTTYMIPMYLIIATMYFVVCFALSLFAQRLRKKLG 217



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 38/82 (46%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +    +L G + T  ++   ++ + IIG ++G  R    K ++ +  + +++ RN+P 
Sbjct: 9   SPTNLRFLLEGLLVTVEVSIISIVLSYIIGLILGTIRYMKIKYISAVVGLIIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           L++IFF Y     +        
Sbjct: 69  LLIIFFTYFGFPELGIHATPFW 90


>gi|254501362|ref|ZP_05113513.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222437433|gb|EEE44112.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 275

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 87/226 (38%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            +             +I   S VLG +LS+      R    K        Y++ F   G 
Sbjct: 55  QKYWPEYVDGFIVTIQIVSVSLVLGALLSVPIAA-GRASKLKIFSWPAYAYVNFF--RGT 111

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L    + Y   F                   +  +    S  TAA+ AEI+R  +  V
Sbjct: 112 PLLAQAFMVYY-GFGSFSEELKAAGLWWFFRDAWYCVIFTFSLNTAAYQAEILRGAIQNV 170

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ E   ALGL+       ++LPQA+   + P  ++ + ++K S++A  V   DL+  
Sbjct: 171 PKGQWEGGEALGLSRNVIFFKIILPQALMVALRPYGNEIILMIKGSAIASIVTIYDLMGE 230

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +++    +  +     YL +   +    +++ A++    K+
Sbjct: 231 TRRAYSRSYD-FQAYIWAAVAYLLIVETLRRIWDKIEARLTRHLKR 275



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 33/89 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + GF+ T  +    ++   ++   + AGR S  K+ +W    YV  FR  P L  
Sbjct: 57  YWPEYVDGFIVTIQIVSVSLVLGALLSVPIAAGRASKLKIFSWPAYAYVNFFRGTPLLAQ 116

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            F +Y    S       + +  F      
Sbjct: 117 AFMVYYGFGSFSEELKAAGLWWFFRDAWY 145


>gi|242280778|ref|YP_002992907.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123672|gb|ACS81368.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 218

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 12/172 (6%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             ++I G P L+ +   Y              +          +  +AL  +  A+IAEI
Sbjct: 58  YIYIIRGTPLLLQLLFIY------------FGMRSLVGLSALPAAVLALGIHNGAYIAEI 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  + ++  GQMEAA ++G+++ +A   ++LPQA +  IP L +Q++  LK+SSLA  +
Sbjct: 106 FRGAIASISPGQMEAARSIGMSYPRAMVRIVLPQAFKRAIPSLGNQFIIALKDSSLASTI 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L+     + +     +E++ I    YL  +       + +  K+    
Sbjct: 166 TINELLLKSQQLASSNFMMMEMLTIAGVFYLIYTGAFTFLFHAIERKLDTSR 217


>gi|210630039|ref|ZP_03296224.1| hypothetical protein COLSTE_00108 [Collinsella stercoris DSM 13279]
 gi|210160716|gb|EEA91687.1| hypothetical protein COLSTE_00108 [Collinsella stercoris DSM 13279]
          Length = 229

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 102/210 (48%), Gaps = 15/210 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   V +  LG+V++       R       +A+  +YIS  ++ G P ++ +   Y 
Sbjct: 31  QIFALTLVGALPLGMVVAFL-----RGSRCAVVRAITRVYIS--VMRGTPLMLQMFAIYF 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + +       + F    T   ++ +  +A     AA+ AEI RSGL ++PRGQ EAA  L
Sbjct: 84  MPY-------YVFGIQLTQDSKWQATIVAFIINYAAYFAEIYRSGLQSIPRGQYEAAEVL 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G +  +    + LPQ ++ I+P + ++ + L+K++SLA A+G  ++ S    ++  +  +
Sbjct: 137 GYSKPQTFCYIALPQLIKRIMPAIGNEVITLVKDTSLAFAIGVGEMFSTAKALVA-SQVS 195

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    I   IY   + ++ + + R+   +A
Sbjct: 196 MVPFGIAAAIYWVFNFIVEVALGRIEKMLA 225



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +  GF+ +  +    ++ A  +G +V   R S   +V  I RVY+ V R  P ++
Sbjct: 17  TMVQMLAEGFLTSLQIFALTLVGALPLGMVVAFLRGSRCAVVRAITRVYISVMRGTPLML 76

Query: 144 VIFFLYKSVLSVLPIPDHSIVLP 166
            +F +Y     V  I        
Sbjct: 77  QMFAIYFMPYYVFGIQLTQDSKW 99


>gi|70729727|ref|YP_259466.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344026|gb|AAY91632.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 215

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R       + L  +YIS F   G P LV + L   L+F  P +       G  + P F 
Sbjct: 41  ARLSGFFLLRCLARVYISVF--RGTPCLVQLFL---LYFGGPQI-------GLELEP-FS 87

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L    AA++AE +R  +  V  GQ+EAA ++G    +   L+ LPQ  + +I PL
Sbjct: 88  AGVIGLGLNIAAYMAESIRGAISNVDPGQVEAARSIGFGKGQTLWLITLPQTAKLMIRPL 147

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
               + L+K S+L   +   +L       I+ T +  EI ++   +Y+++   + L ++ 
Sbjct: 148 GVNAVALIKGSALVSTISVVELSYTAQRFISSTYKPFEIFMVSAILYIAMVYTVRLLVDH 207

Query: 388 LNAKIALK 395
           L+ + A K
Sbjct: 208 LDKRFAAK 215


>gi|320325829|gb|EFW81890.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327253|gb|EFW83267.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 365

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGIAFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+ L + ++  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMDLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPI 158
           +   +P 
Sbjct: 217 LPLFMPE 223


>gi|253688538|ref|YP_003017728.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755116|gb|ACT13192.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 314

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 1/264 (0%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR    L  +F     + S+   P     +    F N   L+    T+   A   +FS V
Sbjct: 31  FRFAGALFSLFIFAAIIQSIALNPRWEWSVFAEWFFNPVILTGLGQTLLLTALGTLFSIV 90

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-F 254
            G  L+L     S      +   + L      ++  +       L  +L    P     F
Sbjct: 91  FGTALALARLSPSYLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGIPFTSVVF 150

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  +  +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL   + T  +
Sbjct: 151 LRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGGRRTVRI 210

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++    Y
Sbjct: 211 ILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWY 270

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ ++++    +   ++    +
Sbjct: 271 LLITTVLSVIQYYVERYVSRGAVR 294


>gi|217963554|ref|YP_002349232.1| L-cystine transport system permease protein TcyL [Listeria
           monocytogenes HCC23]
 gi|290893635|ref|ZP_06556617.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|217332824|gb|ACK38618.1| L-cystine transport system permease protein TcyL [Listeria
           monocytogenes HCC23]
 gi|290556837|gb|EFD90369.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|307571870|emb|CAR85049.1| polar amino acid ABC transporter, permease protein [Listeria
           monocytogenes L99]
          Length = 238

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +       L  +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLL-SLPRIYKIPVLDQLARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSIVGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL  R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQTEAAYSVGLNGRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKWIEKRVKKENTR 229



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 35/75 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G L+   R+    ++  + RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVLLSLPRIYKIPVLDQLARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             I    +     ++
Sbjct: 84  SSIVGIDLSQMDPLY 98


>gi|219666813|ref|YP_002457248.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Desulfitobacterium hafniense DCB-2]
 gi|219537073|gb|ACL18812.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Desulfitobacterium hafniense DCB-2]
          Length = 218

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 91/229 (39%), Gaps = 12/229 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-L 228
             N          +    KI V +   G  L+LF           + K +          
Sbjct: 1   MWNWDFAIKIFPEIFAALKITVTATFAGFFLALFLGMFLTIGSRSSLKPIAYGSKGFVEF 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I   P LV +   + +                       +  + L  + + +++E+ RSG
Sbjct: 61  IRSTPLLVQLYFIFYV-----------LPQAGLSLSPLTAGIMGLGIHYSTYLSEVYRSG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP+GQ EAA AL  +  +    +++PQA+  +IP + +  + + K + L  A+   +
Sbjct: 110 IEAVPQGQWEAAKALNFSPWQVWSKIIIPQAVPPVIPVMGNYLITMFKETPLLSAITLVE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++     I + + + +E   I  F++L LS   ++ + RL  ++    +
Sbjct: 170 ILQTAKIIGSHSFRYLEGFTIVGFLFLLLSYPCSVMIRRLEMRMTKSVR 218



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I      T    F+G   A  +G  +  G  S+ K +A+  + +VE  R+ P LV ++F+
Sbjct: 14  IFAALKITVTATFAGFFLALFLGMFLTIGSRSSLKPIAYGSKGFVEFIRSTPLLVQLYFI 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  +               G+ ++              A
Sbjct: 74  FYVLPQAGLSLSPLTAGIMGLGIHYSTYLSEVYRSGIEA 112


>gi|46204319|ref|ZP_00209357.1| COG0765: ABC-type amino acid transport system, permease component
           [Magnetospirillum magnetotacticum MS-1]
          Length = 240

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 12/227 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS    T+ T    +  +F LG V+ +      R    +   A+   Y+  F    +P
Sbjct: 24  MLLSGLAWTVLTALGSWAIAFGLGSVIGVM-----RTLPSRAANAVGAAYVELF--RNVP 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIA 291
            LV + L Y   F  P L            P   F +  + L  +TAA +AE VR+G+ +
Sbjct: 77  LLVQMFLWY---FVLPELLPARIGAAVKQMPDAPFYTAVLCLGFFTAARVAEQVRAGIRS 133

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  A  ALGLT  +  R VLLP A R I+PPLTS++LN LKN+S+A+ +G  +L +
Sbjct: 134 LPRGQALAGTALGLTVAQTYRFVLLPHAYRIILPPLTSEFLNNLKNTSVALTIGLLELTA 193

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +   + Q  E       +YL++++++      L  ++A+   +
Sbjct: 194 RARAMQEFSFQVFEAFTAATLLYLAVNLVVVAGATLLERRLAVPGGR 240



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 37/76 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA  +L G   T   A      A  +G+++G  R   ++    +   YVE+FRN+P 
Sbjct: 18  TGTYADMLLSGLAWTVLTALGSWAIAFGLGSVIGVMRTLPSRAANAVGAAYVELFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLP 157
           LV +F  Y  +  +LP
Sbjct: 78  LVQMFLWYFVLPELLP 93


>gi|220923864|ref|YP_002499166.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948471|gb|ACL58863.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 217

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 105/227 (46%), Gaps = 13/227 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +  +        +    K  +++  +G+ + LF   L +    +  + +  +++
Sbjct: 1   MKFDPSIVLKNWDLLAQGLLLTLKYTIYTCAIGLAIGLFV-ALLQLTPWRLVRWIGRIWV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F    L  L+L       ++  P+  Q              +  + L  Y + F AEI
Sbjct: 60  EFFRNIPLLVLLL-----WTYYAMPIFLQIQVAKE-------TAGILGLGFYASGFYAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ ++ RGQ +A++ALG+++ +  R ++LPQA+R ++PPL  Q +  LKN++L   +
Sbjct: 108 LRAGVQSIDRGQTDASLALGMSYIQRMRRIILPQALRRMVPPLVGQTIMQLKNTTLLSVL 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL+     I + T + +E+  +   +++ +   ++    +   K
Sbjct: 168 TIPDLLYQASYISSFTYRPMEVYTVIGIVFVLILFPLSALSRQFERK 214



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 29/54 (53%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
                     IG  V   +L+  +LV WI R++VE FRNIP LV++ + Y ++ 
Sbjct: 26  TIYTCAIGLAIGLFVALLQLTPWRLVRWIGRIWVEFFRNIPLLVLLLWTYYAMP 79


>gi|91782440|ref|YP_557646.1| ABC basic amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|91686394|gb|ABE29594.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 229

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 87/215 (40%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S     VL L     ++    +    +  +Y  T L+ G+P LVL+ L + 
Sbjct: 15  WQTVKLAVLSLAFAFVLGLLGAA-AKLSKNRISNGVGTVY--TTLVRGVPDLVLMLLLFY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                 F++    L     A+  E  R   +AVPRGQ+EA  A 
Sbjct: 72  SIQIWLNNLTDLLGWDQIDIDPFVAGVAVLGFIYGAYFTETFRGAFLAVPRGQLEAGAAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +    V+ PQ MR  +P + + +  ++K ++L   +G AD+V         T + 
Sbjct: 132 GMTGWQVFSRVMFPQMMRFALPGIGNNWQVMVKATALVSIIGLADVVKASQDAGKGTLRF 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L    IYL ++ +    +  L+ + +   +K
Sbjct: 192 FFFTLFAGAIYLVITTVSNFVLMYLDRRYSTGVRK 226



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  LA   +  A ++G L  A +LS N++   +  VY  + R +P LV+
Sbjct: 6   YGPLLLNGTWQTVKLAVLSLAFAFVLGLLGAAAKLSKNRISNGVGTVYTTLVRGVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+ S+
Sbjct: 66  MLLLFYSI 73


>gi|317405101|gb|EFV85447.1| amino acids ABC transporter [Achromobacter xylosoxidans C54]
          Length = 229

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 17/213 (7%)

Query: 186 NAKIFVFSFVLGIVLS--LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               F  +  L +V +  L   R     + +  + +PLL    F  FG+P L+    +  
Sbjct: 27  WVMAFTIAVTLVVVRATNLAPCRWLVDAYVEYHRNVPLLVQVLFWYFGMPELLPEGFRMW 86

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+                 + E     IAL+  +AA+IAE +RSGL A+P  Q EAA AL
Sbjct: 87  LY---------------QHNAEMSLAAIALALGSAAYIAEDIRSGLRAIPGTQFEAARAL 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G ++ +  R V++PQA+R  IPPL  + L L KN+S+A+A+G  +L      I N+T + 
Sbjct: 132 GASYLQCMRFVIVPQAVRISIPPLVGRALLLFKNTSVAMAIGVMELTYQAREIENETYRT 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                    +YL  S +I L  +R+ A+  L  
Sbjct: 192 FATFGAATLMYLLGSFLIMLIGSRIYARYRLNR 224



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 33/85 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D+S    +  G V T  L     + A  I   +   R +      W+   YVE  RN+P 
Sbjct: 5   DASQYQLLASGMVVTLQLFLVSWVMAFTIAVTLVVVRATNLAPCRWLVDAYVEYHRNVPL 64

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV + F Y  +  +LP      +  
Sbjct: 65  LVQVLFWYFGMPELLPEGFRMWLYQ 89


>gi|218459733|ref|ZP_03499824.1| amino acid ABC transporter ATP-binding protein [Rhizobium etli Kim
           5]
          Length = 272

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 1/209 (0%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   +LG  L+L     S      +   + LL     ++  L    L  L   +    P 
Sbjct: 2   ISGSILGTALALARVSRSPLLSGLSWGYIWLLRSIPMIVLLLILNNLGYLYETIRIGIPF 61

Query: 251 LGQFNFIGGST-VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                F   +  +   F + Y+ L+   +AF AEIVR G+++V  GQ+EAA ALGL  R+
Sbjct: 62  TDTVLFDYPTVQLLTPFAAAYLGLTLNQSAFFAEIVRGGILSVDHGQLEAAAALGLPRRR 121

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQAMRSI+P   ++ + L K++S+   +   +L      I  +  + I ++++
Sbjct: 122 QAFRIVLPQAMRSILPTGFNELIGLAKSTSVVYVLALPELFYTVQVIYRRNLEVIPLLMV 181

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL +  ++++  + +    +    +
Sbjct: 182 ATVWYLIIMTVLSVAQHYIERYFSKGAVR 210


>gi|91778420|ref|YP_553628.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|296159867|ref|ZP_06842688.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|91691080|gb|ABE34278.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295889850|gb|EFG69647.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 218

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F          L       + + +FV G ++ L    + R       + + ++Y+  F  
Sbjct: 4   FTLWDIARNLLLAARWTVLLSLIAFVGGGIVGLILLAM-RVSPIAWLRRIVVVYVEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L              +++  + L+ YT+A++ +I R  +
Sbjct: 61  QGTPLLMQLFLAF---FGLPLL--------GVDVSPWVAATVTLTLYTSAYLVDIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ  A  +LG+T  +  R ++ PQA++  + P     + ++K+++LA  +GF +L
Sbjct: 110 EAVPRGQWAAGASLGMTFGQQLRYIVWPQALKIAVAPTVGFLVQVVKSTALASIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  I N   +   I  +   IY ++   +  +   L  +  + + +
Sbjct: 170 TKTGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVLEKRQKVGQHR 218



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L+    T  L+    +   I+G ++ A R+S    +  I  VYVEVF+  P L
Sbjct: 7   WDIARNLLLAARWTVLLSLIAFVGGGIVGLILLAMRVSPIAWLRRIVVVYVEVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  +       +     + L               A
Sbjct: 67  MQLFLAFFGLPLLGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111


>gi|238793126|ref|ZP_04636754.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia intermedia ATCC 29909]
 gi|238727499|gb|EEQ19025.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia intermedia ATCC 29909]
          Length = 245

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 4/245 (1%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRH 210
           +++  + D  +   +  +L    L    ++  T     +  F+L       L A R    
Sbjct: 1   MNLHHLTDWLLAPQYLNWLWQGFLLTLWISACTVVAATLLGFLLAAARDSELKALRWFAV 60

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
            +    +  PLL    F  F     +       L  + P    F  +     S EF++ +
Sbjct: 61  GYSTLFRNTPLLIQLFFWYFAASQFLPATWVPWL--NTPHEITFIGLTLGWPSFEFLAGF 118

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+ Y+ AFIAE +RSG+  V +GQ  AA ALGLT  ++ R V+LPQA++  +PPL  Q
Sbjct: 119 IGLTLYSTAFIAEELRSGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAMPPLLGQ 178

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           Y+N++KNSSLA+A+G A+L      +  +T +  +   +   +Y+++  +I  +      
Sbjct: 179 YMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQ 238

Query: 391 KIALK 395
           + A++
Sbjct: 239 RTAIR 243



 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 41/89 (46%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ AT++G L+ A R S  K + W    Y  
Sbjct: 5   HLTDWLLAPQYLNWLWQGFLLTLWISACTVVAATLLGFLLAAARDSELKALRWFAVGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +    LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQFLPATWVPW 93


>gi|157828045|ref|YP_001494287.1| amino acid ABC transporter permease protein [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165932742|ref|YP_001649531.1| hypothetical protein RrIowa_0212 [Rickettsia rickettsii str. Iowa]
 gi|157800526|gb|ABV75779.1| amino acid ABC transporter permease protein [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165907829|gb|ABY72125.1| hypothetical protein RrIowa_0212 [Rickettsia rickettsii str. Iowa]
          Length = 218

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      + F         K  V + + G+V+ +    + +       +     Y 
Sbjct: 1   MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLL-AICKVNKNHALRLFANFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ +++ Y   F  P +    F         FM+  IA S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLSIIY---FASPYIIGIKF-------SVFMAGAIAFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EAA AL +     T+ ++LPQA+++I P L ++ +NL+K S++   +
Sbjct: 108 IRAGINAVDKGQFEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISML 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      +LI    Y  L ++I+     +  K+
Sbjct: 168 GEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKM 215



 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 29/65 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N  +      Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNHALRLFANFYTSIFRGTPLLIQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|238749889|ref|ZP_04611393.1| Glutamine transport system permease protein glnP [Yersinia rohdei
           ATCC 43380]
 gi|238711818|gb|EEQ04032.1| Glutamine transport system permease protein glnP [Yersinia rohdei
           ATCC 43380]
          Length = 218

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +     + + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FALPMMMPMRI-------DPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 90  SAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G++   IIG   G  R     L   I  V++E+ R
Sbjct: 4   EWSAIWPAIPILLEGAKLTLWISVLGLLGGLIIGVTAGFARAYGGWLSRNIALVFIELIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             P +V + F+Y ++  ++P+            + N G     +T      I       G
Sbjct: 64  GTPIVVQVMFIYFALPMMMPMRIDPFSAAVVTIMINSGAYIAEITRGAVLSIHNGFREAG 123

Query: 198 IVLSL 202
           + L L
Sbjct: 124 LALGL 128


>gi|91785181|ref|YP_560387.1| His/Glu/Gln/Arg/opine ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91689135|gb|ABE32335.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia xenovorans
           LB400]
          Length = 246

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 8/222 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS   +T+  +   +V + ++G +  +      R    K    +  LY++ F    +P
Sbjct: 25  WLLSGFWVTITVSLSAWVIALIVGSLFGVL-----RTVPNKWASGIGTLYVAIF--RNIP 77

Query: 234 TLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V   + Y  +    PV     F      +  F S  I L  +TAA + E VRSG+ A+
Sbjct: 78  LIVQFFIWYLVIPELLPVSMGNWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINAL 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS++A  +G  DL + 
Sbjct: 138 PRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQ 197

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +++ T Q  E  +     Y+ +++++   M  + AK  L
Sbjct: 198 ARQLVDYTSQTYESFIAVTVAYMLINLVVMQLMRWVEAKTRL 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 44/88 (50%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L GF  T  ++ S  + A I+G+L G  R   NK  + I 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            +YV +FRNIP +V  F  Y  +  +LP
Sbjct: 67  TLYVAIFRNIPLIVQFFIWYLVIPELLP 94


>gi|218659439|ref|ZP_03515369.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli IE4771]
          Length = 129

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/129 (37%), Positives = 80/129 (62%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IAL    ++FIAEI R+G  +V  GQ+EAA +LGL+  +  RLV+ PQA+R I PPL+
Sbjct: 1   AIIALMIGYSSFIAEIFRAGFQSVDIGQIEAAKSLGLSRYRRFRLVVFPQAIRVIFPPLS 60

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +++++K+SSL   +G AD+  +G    + + +  E   I  +IYL L+I ++L + R+
Sbjct: 61  NDFVSMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVTYIYLILTIGLSLALRRI 120

Query: 389 NAKIALKEK 397
             K+    +
Sbjct: 121 EKKMKQMPR 129


>gi|73537533|ref|YP_297900.1| glutamine ABC transporter permease protein [Ralstonia eutropha
           JMP134]
 gi|72120870|gb|AAZ63056.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ralstonia eutropha JMP134]
          Length = 218

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L            I +   V G ++ L    L R +     + +   Y+
Sbjct: 1   MEFDFSVITDALPALLQGARLTVAITLAGLVGGTLVGLLFG-LMRAYGNAWVQNIAFTYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L+ G P +V +   Y   F  PVL                +   ++   + A+IAEI
Sbjct: 60  E--LVRGTPIVVQVMFIY---FALPVL-------LHVRVDAMTAAVASIIVNSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR   ++VPRG  EA +ALGL   +    V+ P A+R + PPL +Q++  LK++SL + +
Sbjct: 108 VRGAFLSVPRGLREAGLALGLPPWRVLAFVVGPVALRRMTPPLGNQFIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  ++    +A+EI      +YL +   +   +  +  ++ +
Sbjct: 168 GVGELTRQGQEVMAANFRAVEIWTAVAALYLCMIGAMTFVLRTMEKRMRI 217



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 7/201 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +  +G++  T++G L G  R   N  V  I   YVE+ R  P +V + F
Sbjct: 14  ALLQGARLTVAITLAGLVGGTLVGLLFGLMRAYGNAWVQNIAFTYVELVRGTPIVVQVMF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y ++  +L +   ++       + N G     +       +       G+ L L   R+
Sbjct: 74  IYFALPVLLHVRVDAMTAAVASIIVNSGAYIAEIVRGAFLSVPRGLREAGLALGLPPWRV 133

Query: 208 SRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                      +  P L     +     +L ++    +L      +   NF      + E
Sbjct: 134 LAFVVGPVALRRMTPPLGNQFIVSLKDTSLFIVIGVGELTRQGQEVMAANF-----RAVE 188

Query: 266 FMSLYIALSCYTAAFIAEIVR 286
             +   AL       +  ++R
Sbjct: 189 IWTAVAALYLCMIGAMTFVLR 209


>gi|293605651|ref|ZP_06688030.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292815935|gb|EFF75037.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 218

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L           KI  +    G +L   +  ++R +      A+  +Y+
Sbjct: 1   MEFDWTVIKDALPNLLEGTLMTIKITFWGLFGGFLLGALSG-VTRAYGHPILSAIAQVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+L                +  + L   + A+I+EI
Sbjct: 60  --AVIRGTPIVVQVMFIY---FALPLL-------ADIRVDAEWAAIVTLIINSGAYISEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L++V +G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK+SSL + +
Sbjct: 108 VRGALLSVHKGLKEAGQAMGLPFHKILFHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  I+    +A+EI      +YL L+ ++AL ++ +  ++ +
Sbjct: 168 GVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGLMALGLHLVEKRMRI 217


>gi|87309628|ref|ZP_01091762.1| putative inner membrane component of binding-protein-dependent
           transport system [Blastopirellula marina DSM 3645]
 gi|87287392|gb|EAQ79292.1| putative inner membrane component of binding-protein-dependent
           transport system [Blastopirellula marina DSM 3645]
          Length = 211

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 13/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I +    + +V SL A  L R   +   +    +Y+ TF   G   +VL+   Y 
Sbjct: 6   WVTILITLGGIAVALVSSLLAG-LGRDSRDPIVRWTATIYVETF--RGASAIVLL---YW 59

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F  P L            P  ++  + L     A+ AE+VR+ + +VP GQ  AA AL
Sbjct: 60  FYFAMPGLIG-------VSMPAMVAGIVILGLNIGAYGAEVVRAAIHSVPVGQRIAAQAL 112

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            LT  +  R ++LPQA  +  PPL +  + LLK+++L   +   DL  +G  +  +T ++
Sbjct: 113 NLTPWQTMRYIVLPQAALAATPPLGNLMIELLKSTALVSMITVVDLTQMGMFLRTETHRS 172

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + I  + + IY  LS  IA  + ++  ++A  +
Sbjct: 173 LAIFSMLLLIYFVLSQCIAAAVRQIEHRLARGQ 205



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 33/65 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +   G+  A +   L G GR S + +V W   +YVE FR    +V++++ 
Sbjct: 1   MLQGLWVTILITLGGIAVALVSSLLAGLGRDSRDPIVRWTATIYVETFRGASAIVLLYWF 60

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 61  YFAMP 65


>gi|308186223|ref|YP_003930354.1| Arginine transport system permease protein artM [Pantoea vagans
           C9-1]
 gi|308056733|gb|ADO08905.1| Arginine transport system permease protein artM [Pantoea vagans
           C9-1]
          Length = 222

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT    PL+     L  G P LV I L Y      P + Q  ++      P ++   +AL
Sbjct: 40  KTPVLNPLVKGFITLFTGTPLLVQIFLIYYGPGQFPSIQQIPWLWHLLSQP-WLCAMLAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  +AA+  ++    + A+P GQ ++  ALG++ +     +LLP A +  +   +++ + 
Sbjct: 99  SLNSAAYTTQLFYGAVRAIPSGQWQSCAALGMSRKDTL-RILLPYAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K +SLA  +   +++  G  +  +T   I +      IYL ++ ++ L M  +  +  
Sbjct: 158 VFKGTSLAYTITLMEVMGHGQLLYGRTYD-ITVYAAAGLIYLCVNGLLTLMMRLIEKRAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 AFERR 221


>gi|292487796|ref|YP_003530671.1| arginine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292899026|ref|YP_003538395.1| arginine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198874|emb|CBJ45984.1| arginine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291553218|emb|CBA20263.1| Arginine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 238

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 8/220 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKT------GKALPLLYISTFLIFGLPTLVL- 237
                 V    + +V +++ +   R             +ALP + +  F+ FG   L++ 
Sbjct: 17  LAVCALVAGLFMAMVFAVWESARWRPLAWLASGLVTLFRALPEILVVLFIYFGASQLLIS 76

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           ++  + L      +     I    VSP F+   IAL+   A++ ++ +R  L AVP GQ 
Sbjct: 77  LSDGFTLDLAFVQIPVQINIENFDVSP-FLCGVIALAILYASYASQTLRGALQAVPLGQW 135

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L   +   D++    +I 
Sbjct: 136 ESGQALGMKKSAIFLRLIVPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQTKSIA 195

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +T +     +I   IYL +++     + R+  +    E+
Sbjct: 196 TRTQEPFTWYMIAAAIYLVITLFSQQVLKRIELRATRFER 235



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 35/101 (34%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA   ++    +  +      +  + +AW+    V +FR +P ++V+ F+Y     +
Sbjct: 14  TVGLAVCALVAGLFMAMVFAVWESARWRPLAWLASGLVTLFRALPEILVVLFIYFGASQL 73

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           L        L          ++     +       +   +L
Sbjct: 74  LISLSDGFTLDLAFVQIPVQINIENFDVSPFLCGVIALAIL 114


>gi|89214060|gb|ABD64372.1| amino acid ABC transporter permease protein 2 [Pseudomonas
           chlororaphis]
          Length = 215

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +      +     + + +F+ G +  L    L R   +        LYI  F  
Sbjct: 3   FSFWDIVRNLLTGLQWTLLLSLVAFIGGGLYGLLIMTL-RISKKAFPSHFARLYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           +++  IAL+ +T+A++AEI R  +
Sbjct: 60  QGTPLLMQLFLVF-----------FGIALLGVDISPWLAAAIALTLFTSAYLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P GQ EA+ +L L   +  R V+LPQA+R  + P     + ++K +++   +G  +L
Sbjct: 109 DSIPNGQWEASSSLALNPYEQLRHVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGLTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              GG + N T +   +  +    Y  L   ++L    L  ++
Sbjct: 169 TKTGGMLANATFEPFMVYGLVALGYFLLCYPLSLSARYLERRL 211



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 37/106 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L G   T  L+    I   + G L+   R+S     +   R+Y+E+F+  P L
Sbjct: 6   WDIVRNLLTGLQWTLLLSLVAFIGGGLYGLLIMTLRISKKAFPSHFARLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + +F ++  +  +       +     + L              ++ 
Sbjct: 66  MQLFLVFFGIALLGVDISPWLAAAIALTLFTSAYLAEIWRGCVDSI 111


>gi|303240911|ref|ZP_07327422.1| polar amino acid ABC transporter, inner membrane subunit
           [Acetivibrio cellulolyticus CD2]
 gi|302591497|gb|EFL61234.1| polar amino acid ABC transporter, inner membrane subunit
           [Acetivibrio cellulolyticus CD2]
          Length = 210

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 102/214 (47%), Gaps = 14/214 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M  + ++F+ + +  + L L      R    +   A+  +YIS  ++ G P ++ + + Y
Sbjct: 11  MVVSIELFLLTLIFALPLGLII-SFGRRAKNRIISAIAGIYIS--IMRGTPLMLQLVVVY 67

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +           GG      F +  IAL    AA+ AEI R G+ ++P+GQ EA   
Sbjct: 68  FGPY--------YVFGGKI--DRFPAAVIALVLNYAAYFAEIFRGGIDSIPKGQYEAGEV 117

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG T  +    ++LPQ ++ I+P ++++ + L+K+++L  A+G A++       + + G 
Sbjct: 118 LGFTKVQVFFKIVLPQVVKRILPAISNEVITLVKDTALVTAIGVAEMFKAANNEMTRIG- 176

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++ + +    Y  ++++IA        K+    
Sbjct: 177 SMQPVFVAGVFYYVMNLIIAKLFEFAEKKLNYYR 210



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 32/63 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V +  L    +I A  +G ++  GR + N++++ I  +Y+ + R  P ++ +  +
Sbjct: 7   LCDGMVVSIELFLLTLIFALPLGLIISFGRRAKNRIISAIAGIYISIMRGTPLMLQLVVV 66

Query: 149 YKS 151
           Y  
Sbjct: 67  YFG 69


>gi|300702420|ref|YP_003744020.1| amino-acid ABC transporter [Ralstonia solanacearum CFBP2957]
 gi|299070081|emb|CBJ41368.1| putative amino-acid ABC transporter [Ralstonia solanacearum
           CFBP2957]
          Length = 223

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 18/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++     F+ S V+G+ L+L      +                  +I GLP +
Sbjct: 18  LQGAVVTVEVTVLSFLLSSVIGLALALMRLSPVKAVS-------AAGATVANIIRGLPII 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y           F           F +  I L    +A+ AE  R+G+ AV  G
Sbjct: 71  VQLFYIY-----------FVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++   G  
Sbjct: 120 QREAAQAMGMRGALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQL 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I + T Q + +  +   +YL +S+ +   + RL   +    
Sbjct: 180 IASSTFQNMTVYTLVALLYLLMSLPLVFGLRRLERAMGAGR 220



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +     + +++IG  +   RLS  K V+        + R +P +V +F++
Sbjct: 17  LLQGAVVTVEVTVLSFLLSSVIGLALALMRLSPVKAVSAAGATVANIIRGLPIIVQLFYI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +            G+ +               A
Sbjct: 77  YFVLPDIGIQLTAFQAGVIGLGIAYSAYQAENFRAGIEA 115


>gi|330954115|gb|EGH54375.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           Cit 7]
          Length = 246

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y + ++ EI+R  + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSVYLCEIIRGAIQALPTGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVEQRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|257056915|ref|YP_003134747.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586787|gb|ACU97920.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 219

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 14/227 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               +            +       V    +   L L    + R         +   +I 
Sbjct: 3   WDWDYTFEILPELLEHFVRYTLVATVLGITVAAALGLV-FAIIRRSRVPVLAQVTTAFIE 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              +   P L+ +   +               G        ++  + L  + A + A++ 
Sbjct: 62  F--VRSTPLLIQLFFLFY-----------ALPGMGITLSPMVAGVLGLGVHYACYCADVY 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AVP+GQ EA++AL L      R V+LPQA+R+++P L +  + + K +     + 
Sbjct: 109 RAGIEAVPKGQWEASLALQLPAHITWRRVVLPQAVRNVLPALGNYAIAMFKETPFLALIT 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +L+    TI   T + +E + +   I+L+ S   AL + +L  ++
Sbjct: 169 VPELLRTARTIGGDTYEYLEPLTLAGLIFLAASYPTALLLRKLENRM 215



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T      G+  A  +G +    R S   ++A +   ++E  R+ P L+ +FFL+ ++  +
Sbjct: 23  TLVATVLGITVAAALGLVFAIIRRSRVPVLAQVTTAFIEFVRSTPLLIQLFFLFYALPGM 82

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                  +    G+ ++              A
Sbjct: 83  GITLSPMVAGVLGLGVHYACYCADVYRAGIEA 114


>gi|296131956|ref|YP_003639203.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola sp. JR]
 gi|296030534|gb|ADG81302.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermincola potens JR]
          Length = 221

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            + R   +K        YIS  ++ G P L+ I   Y            ++I        
Sbjct: 43  AIGRLSTKKWISNPIKWYIS--VMRGTPLLLQIWFVYFTP---------SYILPGFSLDR 91

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++  IA S   AA+ AEI R G++++PRGQ EAA  LG T  +    ++LPQ ++ I+P
Sbjct: 92  FIAAVIAFSLNYAAYFAEIYRGGILSIPRGQYEAAAVLGFTRTQTFVRIILPQVIKRILP 151

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P++++ + L+K+++L   +G ++L  V     ++      I  +    YL ++  +    
Sbjct: 152 PVSNEVITLVKDTALVTVLGISELFRVAKNESSRIFSTTPIF-VAGLFYLIMNWAVEKVF 210

Query: 386 NRLNAKIALKE 396
           + L  ++    
Sbjct: 211 HTLERRLGYYR 221


>gi|167565679|ref|ZP_02358595.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia oklahomensis EO147]
          Length = 229

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +    +   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTVETVKLAVLSLAASLVLGLAGAA-AKLSPNRVLAGVGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNDATDMLGVDQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G++  +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMSSWRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  L +  L  + +   ++
Sbjct: 188 TLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRR 226



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G V T  LA   +  + ++G    A +LS N+++A +   Y  + R +P LV+
Sbjct: 6   FGPLLWAGTVETVKLAVLSLAASLVLGLAGAAAKLSPNRVLAGVGTFYTTLIRAVPDLVL 65

Query: 145 IFFLYKSV 152
           +  L+  +
Sbjct: 66  MLLLFYGI 73


>gi|154483128|ref|ZP_02025576.1| hypothetical protein EUBVEN_00829 [Eubacterium ventriosum ATCC
           27560]
 gi|149735936|gb|EDM51822.1| hypothetical protein EUBVEN_00829 [Eubacterium ventriosum ATCC
           27560]
          Length = 229

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 11/227 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
              N  L   +L M    KIFV + +  +   L      R    K  K L  +YIS  ++
Sbjct: 14  MPMNMMLEKMSLGMIETVKIFVLTLLFSLPFGLVV-AWGRMSRIKIVKWLVNIYIS--IM 70

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ +   Y           +      +    F ++ I+     AA+ AEI RSG+
Sbjct: 71  RGTPLMLQVMAIYFGP-------SYLLKIQISRDYRFYAVIISFVLNYAAYFAEIYRSGI 123

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++PRGQ EAA  LG    +    ++LPQ ++ I+P +T++ + L+K++SLA ++ + ++
Sbjct: 124 ESMPRGQYEAANMLGYNKAQTFMKIILPQVIKRILPSITNEVICLVKDTSLAFSIAYMEM 183

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            S+   I + T  ++    +    Y   + ++A  M  +  K++   
Sbjct: 184 FSIAKQIASST-SSLTPFFVAGVFYFVFNALVAWIMGLIEKKLSYYR 229



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 39/98 (39%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +    ++ +   G +V  GR+S  K+V W+  +Y+ + R  P ++ +  +Y  
Sbjct: 26  GMIETVKIFVLTLLFSLPFGLVVAWGRMSRIKIVKWLVNIYISIMRGTPLMLQVMAIYFG 85

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
              +L I        + + ++              + I
Sbjct: 86  PSYLLKIQISRDYRFYAVIISFVLNYAAYFAEIYRSGI 123


>gi|78059832|ref|YP_366407.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77964382|gb|ABB05763.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 254

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S VLG ++             +  +AL   Y+   LI   P LV +   +  
Sbjct: 23  VTLGLTAASTVLGGLIGT-TGAWVALAGPRWARALVAAYVE--LIRNTPFLVQLFFIF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F   G      E  +  +A++    A+  EI+R+G+ +VP GQ++AA ALG
Sbjct: 78  ---------FGLPGIGVHIDEAQAAVLAMTVNLGAYAVEILRAGIESVPHGQVQAARALG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+    V+LPQA+ ++ P L  Q L ++  S++   +   DL      I ++  +A 
Sbjct: 129 LHGRQVFGHVVLPQALANVYPALLGQVLIVMLGSAVVSQISVPDLTYAANYIQSRNFRAF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           EI ++   IYL LSI + + +NR+  ++
Sbjct: 189 EIYIVVTAIYLLLSIALRMLLNRVGRRL 216



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 39/95 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA  +  G   T  L  +  +   +IGT      L+  +    +   YVE+ R
Sbjct: 6   DFSDFGLYAGMLARGIGVTLGLTAASTVLGGLIGTTGAWVALAGPRWARALVAAYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P LV +FF++  +  +    D +      M +N
Sbjct: 66  NTPFLVQLFFIFFGLPGIGVHIDEAQAAVLAMTVN 100


>gi|91787333|ref|YP_548285.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696558|gb|ABE43387.1| amino acid ABC transporter membrane protein, PAAT family
           [Polaromonas sp. JS666]
          Length = 216

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 18/221 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    LT+       + S +LG+V ++            +   + LL        
Sbjct: 11  FMPILLQGAWLTILVTLGSLLLSTMLGLVWAVMRVSGIPLLANASAAVINLL-------R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P +V++   Y           F             +  + L    +A+ AE  R+G+ 
Sbjct: 64  GIPIIVILFFLY-----------FVMPDVGISLSALQAGILGLGIAYSAYQAENFRAGIE 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ+EAA A+G++     R V+LPQA++ ++PP  +  + +LK+SS A  +  A+L 
Sbjct: 113 AVDHGQVEAARAMGMSWGLMMRRVVLPQAVKIVLPPYGNIMIMMLKDSSQASTITVAELA 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G  I   T Q   +  +   IYL + + + L +  L  +
Sbjct: 173 LQGKMIATSTFQNATVFTLVALIYLVMCVPLILLVRHLEKR 213



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 3/123 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +T++G +    R+S   L+A      + + R IP +V++FFL
Sbjct: 15  LLQGAWLTILVTLGSLLLSTMLGLVWAVMRVSGIPLLANASAAVINLLRGIPIIVILFFL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA---KIFVFSFVLGIVLSLFAT 205
           Y  +  V            G+ +               A        +  +G+   L   
Sbjct: 75  YFVMPDVGISLSALQAGILGLGIAYSAYQAENFRAGIEAVDHGQVEAARAMGMSWGLMMR 134

Query: 206 RLS 208
           R+ 
Sbjct: 135 RVV 137


>gi|238784074|ref|ZP_04628089.1| Glutamine transport system permease protein glnP [Yersinia
           bercovieri ATCC 43970]
 gi|238788814|ref|ZP_04632605.1| Glutamine transport system permease protein glnP [Yersinia
           frederiksenii ATCC 33641]
 gi|238715051|gb|EEQ07048.1| Glutamine transport system permease protein glnP [Yersinia
           bercovieri ATCC 43970]
 gi|238723119|gb|EEQ14768.1| Glutamine transport system permease protein glnP [Yersinia
           frederiksenii ATCC 33641]
          Length = 218

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +     + + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FALPMMM-------PVRIDPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 90  SAAVVTIIINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217


>gi|58336908|ref|YP_193493.1| glutamine ABC transporter membrane protein [Lactobacillus
           acidophilus NCFM]
 gi|227903466|ref|ZP_04021271.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus acidophilus ATCC 4796]
 gi|58254225|gb|AAV42462.1| glutamine ABC transporter (membrane protein) [Lactobacillus
           acidophilus NCFM]
 gi|227868786|gb|EEJ76207.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus acidophilus ATCC 4796]
          Length = 218

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFV+G++L L      ++     G    
Sbjct: 2   ETFIHAYSWVDIRFLLQGLWVTIYVSLISIALSFVVGLILGLVRYMKIKYLSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+    +   AL  +  A 
Sbjct: 58  ------FIIDIIRNLPLLLIIFFTYFGLPQL--------GIVTNPTTASIAALVIFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ +V  GQME A + G+T+ +A   V++PQA+ ++IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIGSVDPGQMEGARSNGMTYGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   ++   N L  K 
Sbjct: 164 ATIIVLPELLYHAQIIYSQNTTYLIPMYVIIAIMYFIVCFCLSQVANYLQKKY 216



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 36/71 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R    K ++ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLVRYMKIKYLSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|116495482|ref|YP_807216.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|227534091|ref|ZP_03964140.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|301066995|ref|YP_003789018.1| amino acid ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|116105632|gb|ABJ70774.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|227188272|gb|EEI68339.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|300439402|gb|ADK19168.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei str. Zhang]
          Length = 220

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 19/221 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T++ +     FSF+LG++L L      ++F    G          F+I  +
Sbjct: 14  RYLLQGLGVTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVG----------FVIDLI 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + +  +F  P +                +  IA+S + +A +AEIVRSG+ AV
Sbjct: 64  RNLPLLLILFFTYFALPDI--------GIRLNVVAAAIIAMSIFESAMLAEIVRSGINAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA  +   +    
Sbjct: 116 PRGQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYH 175

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I  Q     I + +    +Y  ++  ++L    L+ ++
Sbjct: 176 AQIIYGQNINYMIPMFVALAVMYFVVNYALSLASRWLDRRL 216



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 35/77 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +  + I+G ++G  R    K  + I    +++ RN+P 
Sbjct: 9   SWINLRYLLQGLGVTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDLIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPI 158
           L+++FF Y ++  +   
Sbjct: 69  LLILFFTYFALPDIGIR 85


>gi|330874239|gb|EGH08388.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330968063|gb|EGH68323.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 231

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 3/181 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +            +     F +  
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNGMRALGELLGIPNLALSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++  + M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEK 220

Query: 391 K 391
           +
Sbjct: 221 R 221


>gi|327192313|gb|EGE59278.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 236

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M + +  L+          ++ V    L +V++  A  L R       +AL   YI  F 
Sbjct: 18  MSVWSGYLTLILEGALVTLQLTVMGSALALVMAFLAG-LGRLSRFFAVRALATAYIEFF- 75

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   Y           F             +  +AL     A+ AE+VR  
Sbjct: 76  -RGTSIFVQLFWVY-----------FVLPFAGVTLTPLQAGVLALGLNVGAYGAEVVRGA 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV R Q EA +AL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D
Sbjct: 124 VKAVGREQSEACVALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTD 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +      +  QTG  +      + +Y  +++ I+  M RL  ++A  
Sbjct: 184 MTFQAQVVRAQTGNTLVPFATILILYFLMALAISAAMRRLERRMARG 230



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 3/142 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL G + T  L   G   A ++  L G GRLS    V  +   Y+E FR     V 
Sbjct: 24  YLTLILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRGTSIFVQ 83

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F++Y  +                + LN        +     A     S      ++L  
Sbjct: 84  LFWVYFVLPFAGVTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC---VALNL 140

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
           +R  R  H    +ALPL+  + 
Sbjct: 141 SRYQRMRHVILPQALPLMLPTF 162


>gi|309776367|ref|ZP_07671354.1| arginine transport system permease protein ArtQ
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915886|gb|EFP61639.1| arginine transport system permease protein ArtQ
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 217

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 107/229 (46%), Gaps = 14/229 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +  R        +     + + S   G ++ L    L R    K   A+   YI
Sbjct: 1   MSFNITIIQRFWQLLLSGVPVILYLSLASAFFGTLIGLATVFLRRM--NKVFNAIVAAYI 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P  V + + Y   F  P L   N          +++  +  S  + A+++EI
Sbjct: 59  DLF--RGTPVYVQMFVIY---FGIPGLIGLNI-------NNWVAAILVFSLNSGAYMSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+  + +GQ+EAA ALG++     + +++PQA R+++P + ++++ L K +S+   +
Sbjct: 107 MRAGIDGIDKGQIEAAKALGVSGTDIAKDIIIPQAFRNVLPAVINEFITLTKETSIVSVL 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  D++     + NQT    E +LI   +Y  ++ +++L    +  K+ 
Sbjct: 167 GLHDMMYWFYAVKNQTYADFEPLLIVFLVYYIMNKILSLIGKMIERKLK 215


>gi|187925334|ref|YP_001896976.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187716528|gb|ACD17752.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 246

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 8/222 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS   +T+  +   +V + ++G +  +      R    K    +  LY++ F    +P
Sbjct: 25  WLLSGFWVTITVSLSAWVIALIVGSLFGVL-----RTVPNKWASGIGTLYVAIF--RNIP 77

Query: 234 TLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V   + Y  +    P      F      +  F S  I L  +TAA + E VRSG+ A+
Sbjct: 78  LIVQFFIWYLVIPELLPASMGNWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINAL 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS++A  +G  DL + 
Sbjct: 138 PKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQ 197

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +++ T Q  E  +     Y+ +++++   M  + AK  L
Sbjct: 198 ARQLVDYTSQTYESFIAVTIAYMLINLVVMQLMRWVEAKTRL 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 44/88 (50%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L GF  T  ++ S  + A I+G+L G  R   NK  + I 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            +YV +FRNIP +V  F  Y  +  +LP
Sbjct: 67  TLYVAIFRNIPLIVQFFIWYLVIPELLP 94


>gi|124268064|ref|YP_001022068.1| arginine/ornithine transport system permease [Methylibium
           petroleiphilum PM1]
 gi|124260839|gb|ABM95833.1| arginine/ornithine transport system permease protein [Methylibium
           petroleiphilum PM1]
          Length = 229

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 4/201 (1%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-FDKPVLGQFNF 256
           +VL L A   +R    +  +   L Y  T LI G+P LVL+ L +         L Q   
Sbjct: 28  VVLGLAAAS-ARLSRSRWLQGGALAY--TTLIRGVPDLVLMLLVFFGGQLAVNALAQQLG 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                    F++  + +     A++ E  R   +A+  GQ EA +A G++  +  R +LL
Sbjct: 85  FADYIDVDPFVAGVLTIGFVFGAYLGETFRGAFLALAPGQREAGLACGMSRWQVLRRLLL 144

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  +P L++ +L L+K++++   +G  D++         T +          IYL+
Sbjct: 145 PQMLRYALPGLSNNWLVLVKSTAIVSVIGLNDMMLRATQAAGATREPFVFYASAALIYLA 204

Query: 377 LSIMIALFMNRLNAKIALKEK 397
           ++ +  L    L  ++A+  +
Sbjct: 205 ITSVSELGFKALARRLAVGVR 225


>gi|241765821|ref|ZP_04763760.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241364269|gb|EER59431.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 260

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 76/252 (30%), Positives = 112/252 (44%), Gaps = 12/252 (4%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             +   +L VL +     +L F            +    T   + + S  +G+VL   A 
Sbjct: 19  TLVAALILMVLVLALLGQLLSFFPEPIGSNAQAFSDGARTTLWLTLISGTVGLVLGTAAA 78

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                      + L   YI    I G P LV I   Y   F  PVL            P+
Sbjct: 79  LARTARWI-GLRWLAGFYIWA--IRGTPLLVQILFVY---FALPVLVP------GLNLPD 126

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +  +AL     A+ AE +R+GL+AVPRGQ EAA ALGL        V+ PQA +  +P
Sbjct: 127 FAAAVVALGLNVGAYNAEAIRAGLLAVPRGQTEAARALGLGRGHVFFDVVFPQAFKISLP 186

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL S ++ LLK+SSLA A+G  +L +VG  I + T Q I  +      YL L+ ++    
Sbjct: 187 PLVSNFVALLKDSSLAYAIGVVELTNVGNRIQSATFQPIATLSTVALTYLLLTTLVTQLS 246

Query: 386 NRLNAKIALKEK 397
           N +  +  ++ +
Sbjct: 247 NAIEHRFDVEGR 258



 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 31/78 (39%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               S A A   G   T WL         ++GT     R +    + W+   Y+   R  
Sbjct: 43  EPIGSNAQAFSDGARTTLWLTLISGTVGLVLGTAAALARTARWIGLRWLAGFYIWAIRGT 102

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P LV I F+Y ++  ++P
Sbjct: 103 PLLVQILFVYFALPVLVP 120


>gi|16264464|ref|NP_437256.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|307306765|ref|ZP_07586506.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15140601|emb|CAC49116.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306902056|gb|EFN32654.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 219

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  I + S V+G VL +F   L+  +  +  K +   Y     I G P LVL+   Y +
Sbjct: 22  VSVSISLLSIVVGTVLGVFVG-LALVYGFRPVKWIVRGYTDF--IRGTPVLVLVLASYYV 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F +  +AL+ + ++ + E+VR  L ++P+GQ EAA A+G
Sbjct: 79  -----------LSTIGIDLGPFQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    VL PQA+R  +P   +    ++K S+L   +G ++L+     +I++T  ++
Sbjct: 128 LTFAQTFTYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVSELLLRTQELISRTFMSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E      F+Y  ++  I  F   +  K A+
Sbjct: 188 EFYFFAGFLYFVINYGIERFGRYVERKTAV 217



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  ++   ++  T++G  VG   +   + V WI R Y +  R  P LV++   
Sbjct: 16  LLKGLGVSVSISLLSIVVGTVLGVFVGLALVYGFRPVKWIVRGYTDFIRGTPVLVLVLAS 75

Query: 149 YKSV 152
           Y  +
Sbjct: 76  YYVL 79


>gi|254229001|ref|ZP_04922422.1| membrane protein [Vibrio sp. Ex25]
 gi|262394742|ref|YP_003286596.1| arginine/ornithine ABC transporter permease AotQ [Vibrio sp. Ex25]
 gi|151938469|gb|EDN57306.1| membrane protein [Vibrio sp. Ex25]
 gi|262338336|gb|ACY52131.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. Ex25]
          Length = 246

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ V S +L ++L +    L++    K  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  VTIEVAVLSLLLAVILGMLG-ALAKLAPYKWARAIATLY--TTVIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDKGELEAAKAYGMSSALSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V +       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLDDMVRMSSLAAGTTKMPFTFYMAVALIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A I+G L    +L+  K    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGALVTIEVAVLSLLLAVILGMLGALAKLAPYKWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|224368336|ref|YP_002602499.1| ABC-type arginine/histidine transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223691052|gb|ACN14335.1| ABC-type arginine/histidine transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 233

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 4/219 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           +I   S ++G VL++    + R       +     +   F   G P
Sbjct: 8   NTLPRFLNGTILTLEITALSVIIGFVLAIPL-SIMRVSKNPLIRMPA--FCFNFYFRGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV + L Y              +        F    ++L+  TAA+ +EI R G+  VP
Sbjct: 65  LLVQLFLIYYGSGQFQSFLSDIGLWQFFREAYF-CAVLSLTLNTAAYSSEIFRGGIEGVP 123

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R +++P A+R   P  T++ + LL+ SSL   +   D+  V 
Sbjct: 124 FGEIEAARACGMSGILLYRRIIMPAALRIAWPAYTNEVVFLLQASSLVSIITLMDITGVA 183

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  ++    E+ +    IYL L   +     R+  KI
Sbjct: 184 RVVSARSFAFYELFITAAVIYLILVYGLIFVFKRIERKI 222



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 35/113 (30%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G + T  +    +I   ++   +   R+S N L+      +   FR  P LV +F +
Sbjct: 13  FLNGTILTLEITALSVIIGFVLAIPLSIMRVSKNPLIRMPAFCFNFYFRGTPLLVQLFLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y              +  F        +   TL     +       + G+   
Sbjct: 73  YYGSGQFQSFLSDIGLWQFFREAYFCAVLSLTLNTAAYSSEIFRGGIEGVPFG 125


>gi|332040825|gb|EGI77197.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 226

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 7/208 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V S  LG+VL L     S        +   +L+ +         +VL+     
Sbjct: 16  WITVQLAVCSLALGMVLGLLLAAGS-LSQRPLLRRGVMLWTAVLRGIPEFLIVLV----- 69

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F    +   +F G   +SP F +   AL+   +A+ AE+ R    A+P+GQ+EAA +L
Sbjct: 70  CYFGLSNVINTHFDGAIDLSP-FAAGVFALALVFSAYAAEVFRGSFAAIPKGQIEAAQSL 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    V LPQA R  +P L + + +LLK++SL   VG  DL+         T Q 
Sbjct: 129 GLRPAQTFFAVRLPQAWRIALPSLGNLWQSLLKDTSLVSVVGLEDLLKKANMAGQATHQP 188

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L    +Y             L  +
Sbjct: 189 FVFLLAAAAVYFVFLHASQPVQRWLEQR 216


>gi|323498375|ref|ZP_08103375.1| hypothetical protein VISI1226_13938 [Vibrio sinaloensis DSM 21326]
 gi|323316617|gb|EGA69628.1| hypothetical protein VISI1226_13938 [Vibrio sinaloensis DSM 21326]
          Length = 365

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 73/356 (20%), Positives = 144/356 (40%), Gaps = 57/356 (16%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLV-------------------GAGRLSANKL---V 125
            +     N+   +   +I A ++G L+                      R  A  +   V
Sbjct: 22  WLRKNLFNSPVNSVVTVILAYLVGMLMWNIVDWGLLKADWVGTTRDACSRDGACWVFISV 81

Query: 126 AWICRVY-----VEVFRNIPPLV-VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG---- 175
            W   +Y      E++R  P L  +   ++  +L+    P    +  F + +        
Sbjct: 82  RWEQFMYGFYPQEELWR--PRLFYITLAIFTVLLAYEKTPKRLWIWLFFVNVYPFIIAGL 139

Query: 176 -------LSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYIS 225
                  L            + +   ++GIV+SL    A  L R       +++  +YI 
Sbjct: 140 LYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGVALALGRRSEMPIIRSICTVYIE 199

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            +    L T++ +A           +    F+   + + + +   I +  ++AA++AE+V
Sbjct: 200 VWRGVPLITVLFMA----------SVMLPLFLSEGSETDKLIRALIGVVMFSAAYMAEVV 249

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + + ++ L K++SL + +G
Sbjct: 250 RGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIG 309

Query: 346 FADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D++ +G          G A E  +    ++      ++ +   L  K+    K+
Sbjct: 310 MFDVLGIGQAANTDPEWLGFATESYVFVALVFWVFCFGMSRYSIWLENKLHTGHKR 365


>gi|262274650|ref|ZP_06052461.1| ABC-type arginine/histidine transport system permease component
           [Grimontia hollisae CIP 101886]
 gi|262221213|gb|EEY72527.1| ABC-type arginine/histidine transport system permease component
           [Grimontia hollisae CIP 101886]
          Length = 240

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 5/219 (2%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +    ++   S VLG+++++    ++R            ++   ++  G P L+ +
Sbjct: 23  YWSGLTVTVQLVFLSLVLGLIVAVPL-AIARASKNPWVNR--PVWFFVYIFRGTPLLIQL 79

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L Y        + Q  F   + V   F    +A    TAA+  EI+R  ++A P G++E
Sbjct: 80  YLIYYGVATIEGIQQSMF--WAVVEDAFYPCLLAFVLNTAAYTTEILRGAMVATPAGEIE 137

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A  A G++     R ++LP + R  +P  +++ + +L  SS+A  V   DL      I  
Sbjct: 138 AGKAYGMSRFTILRRIILPSSFRRALPAYSNEVIFMLHASSIASVVTIIDLTGAARDIYA 197

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     +  L    IYL L+  I     RL  +     +
Sbjct: 198 RFYAPFDAFLFVAAIYLCLTFAIVYGFKRLEHRWHRHLR 236



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S+       G   T  L F  ++   I+   +   R S N  V      +V +FR  P 
Sbjct: 16  TSTTILHYWSGLTVTVQLVFLSLVLGLIVAVPLAIARASKNPWVNRPVWFFVYIFRGTPL 75

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV 164
           L+ ++ +Y  V ++  I      
Sbjct: 76  LIQLYLIYYGVATIEGIQQSMFW 98


>gi|188591217|ref|YP_001795817.1| glutamate/aspartate transporter; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
 gi|170938111|emb|CAP63097.1| glutamate/aspartate transport protein; ABC superfamily, membrane
           component [Cupriavidus taiwanensis LMG 19424]
          Length = 242

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 4/235 (1%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            H  V       N   L +    +     + + S+V+ +V+      L R    K    +
Sbjct: 5   WHWGVFLEQAAQNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVL-RTVPNKWLAGI 63

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              Y+  F    +P LV + + Y +  +  + G       +  + +F++  + L  +TAA
Sbjct: 64  AATYVEIF--RNIPLLVQLFIWYFVMPEL-LPGGEAIKQMNPFAQQFLAAMLCLGTFTAA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + E VRSG+ ++ RGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS+
Sbjct: 121 RVCEQVRSGINSLARGQKNAGLAMGFTLPQTYRHVLLPMAFRVIVPPLTSEFLNIFKNSA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +A  +G  +L + G  +++ T +  E  +    +Y  +++ + L M  + A+  +
Sbjct: 181 VASTIGLLELAAQGRQLVDYTARPYESFIAVTLMYALINVTVMLLMRWVEARTRV 235



 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   ++ G   T  L  S  + A +IG+++G  R   NK +A I   YVE+FRNIP
Sbjct: 16  QNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVLRTVPNKWLAGIAATYVEIFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            LV +F  Y  +  +LP  +    + 
Sbjct: 76  LLVQLFIWYFVMPELLPGGEAIKQMN 101


>gi|121609114|ref|YP_996921.1| amino acid ABC transporter permease [Verminephrobacter eiseniae
           EF01-2]
 gi|121553754|gb|ABM57903.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Verminephrobacter eiseniae
           EF01-2]
          Length = 220

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 107/237 (45%), Gaps = 18/237 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +  H   + + + +    L     T+      F  + VLG++L++     +R   + T  
Sbjct: 1   MTTHFFDMQYALRILPELLRASVHTIGITLAGFAIALVLGLMLAIMRRSETRFIAKPT-- 58

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                    F I  + +  L+   Y L +  P+                 +  + ++ + 
Sbjct: 59  --------AFFIEFIRSTPLLIQVYMLFYVAPLY--------GITMSALTAGTLGIAVHY 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A +++E+ R+GL  V RGQ EAA AL L+  +    ++LPQA+R I+P L + ++ + K+
Sbjct: 103 ACYVSEVYRAGLNGVARGQWEAACALSLSPWRTYSGIILPQAIRPILPALGNYFVAMFKD 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +  A+   +L+     I ++T + +E I +    +L +S+  A  + +L  ++ L
Sbjct: 163 TPVLSAITVVELMQQAKNIGSETFRFLEPITLAGLFFLLISVTCASCLRQLEHRVRL 219



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 35/85 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   V+T  +  +G   A ++G ++   R S  + +A     ++E  R+ P L+ ++ L
Sbjct: 18  LLRASVHTIGITLAGFAIALVLGLMLAIMRRSETRFIAKPTAFFIEFIRSTPLLIQVYML 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +                  G+ ++ 
Sbjct: 78  FYVAPLYGITMSALTAGTLGIAVHY 102


>gi|283479444|emb|CAY75360.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 225

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 14/231 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                   F +   L    L       + V +F  G +++L   RL R         +  
Sbjct: 3   WRAALMNTFTDWDILRNLLLAARWTMALSVTAFFGGTLVALPLVRL-RLAGRLWPNRIIR 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F   G P L+ + L +           F           + +  +AL+CYT+AF+
Sbjct: 62  AYVELF--QGTPLLMQLFLAF-----------FGVALFGIDLSPWAAAALALTCYTSAFL 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            +I    + A+P+GQ EA   LGL+  +    V+LPQA+R  I P     + ++K ++LA
Sbjct: 109 VDIWYGSIKALPKGQWEACRCLGLSSGQTLFRVVLPQALRVAIAPTVGFAVQVVKGTALA 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +GF +L   G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 169 SIIGFIELTKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSRYSQYLEKKF 219



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 32/107 (29%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +     T++   +   RL+       I R YVE+F+  P 
Sbjct: 13  DWDILRNLLLAARWTMALSVTAFFGGTLVALPLVRLRLAGRLWPNRIIRAYVELFQGTPL 72

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  V                +                 A 
Sbjct: 73  LMQLFLAFFGVALFGIDLSPWAAAALALTCYTSAFLVDIWYGSIKAL 119


>gi|167900039|ref|ZP_02487440.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei 7894]
          Length = 235

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 13/234 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
             + + F        L      +     I  F    G ++ + A  + R +       L 
Sbjct: 14  RELNVQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAG-MFRAYGPAVLNVLA 72

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI   LI G P +V +     L+F  P+L      G S       +  +A++  + A+
Sbjct: 73  QVYIE--LIRGTPIVVQVMF---LYFALPLLAHVRIDGLS-------AAVVAITLNSGAY 120

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+VR  L+++P+G  EA +A+GL+  +    ++ P A R +I PL +Q +  LK+ SL
Sbjct: 121 LAEVVRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDMSL 180

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + +G  +L   G  II    QA+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 181 FIVIGVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRI 234



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 68/210 (32%), Gaps = 9/210 (4%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLV----GAGRLSANKLVAWICRVYVEVFR 137
           D S   A L   ++   L           G LV    G  R     ++  + +VY+E+ R
Sbjct: 21  DWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAVLNVLAQVYIELIR 80

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             P +V + FLY ++  +  +    +         N G     +       I       G
Sbjct: 81  GTPIVVQVMFLYFALPLLAHVRIDGLSAAVVAITLNSGAYLAEVVRGALLSIPKGLTEAG 140

Query: 198 IVLSLFATR-LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           + + L   R L +       + L    I+      + +L  ++L   +   +        
Sbjct: 141 LAMGLSMPRVLVKIVGPLAFRRL----IAPLGNQCIVSLKDMSLFIVIGVGELTRKGQEI 196

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G+  + E  +   A+       +   +R
Sbjct: 197 IAGNFQAVEIWTAVAAIYLVLTGVMTLTLR 226


>gi|163740276|ref|ZP_02147670.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Phaeobacter gallaeciensis 2.10]
 gi|161386134|gb|EDQ10509.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Phaeobacter gallaeciensis 2.10]
          Length = 432

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 38/330 (11%)

Query: 70  FEIDQGIVPYTSDSSY--ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           F++ + ++ +T+   +     I  G +    +A  G + A  +    G G  +     A 
Sbjct: 131 FDLPRKLLAFTAVYPFIAFWLIWGGSILVPIVALLGFVAAGFVFQKFGKGSFALGFFGAI 190

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  V V                   +    IP+ +        + +R L    L M    
Sbjct: 191 VAAVVV-----------------WNIGGFLIPEGASDNAMLSAVPSRDLGGFMLNMMLGV 233

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                S  LGI L+L      R  +    K + +++I       L TL+ +A     +F 
Sbjct: 234 TCVSLSVPLGIALAL-----GRQSNMPLIKWICVVFIEFVRGVPLITLLFVASVMLSYFF 288

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P                F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL +
Sbjct: 289 PP----------DATVDLFLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLDY 338

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VSVGGTIINQ--TGQA 363
            +A RL++LPQA++  IP + +  + L K+++L   +   DL  +  G  + +    G  
Sbjct: 339 PQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVY 398

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            E++    F++  +   I+ +   L  ++A
Sbjct: 399 WELLGFAAFLFFIVCYGISQYSQWLERRLA 428


>gi|172059652|ref|YP_001807304.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171992169|gb|ACB63088.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 246

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFIWYLVVPELLPASVGTWIKQLPPTTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFIWYLVVPELLPASVGTWI 101


>gi|319792873|ref|YP_004154513.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315595336|gb|ADU36402.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 217

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 18/232 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG       L     T+  +A  FV   +LG++++L  T  S                 T
Sbjct: 4   FGFPEFLFILEAAQWTLALSAIAFVGGAILGLIIALMRTSDS-----------------T 46

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +        + +     L     ++     + G  ++P +++  +AL   +AAF+ EI R
Sbjct: 47  WARNASMVFIQVFQGTPLLLQLFLIFFGAPVLGLDINP-WIAAGVALILNSAAFLGEIWR 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+PRGQ EAA AL L +    R V+LPQA +  + P     + ++K +SLA  +GF
Sbjct: 106 GCIEAIPRGQWEAAEALSLKYGARMRDVVLPQAFKIALAPTVGYLVQIIKGTSLAAIIGF 165

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++   G  I N T Q + +  +   IY  +   ++L   R+  K A    +
Sbjct: 166 TEITRAGQIINNATFQPLIVFSVVAAIYFVICWPLSLLAARMERKRARALAR 217


>gi|300310828|ref|YP_003774920.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300073613|gb|ADJ63012.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 216

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 101/234 (43%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  F        L     T+  +A  F+   + G +++L      R  H    + L  +
Sbjct: 1   MLAEFSFDNFVFLLEAARWTLLLSALAFLGGGIAGFIVALM-----RTSHLAPLRLLSAV 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   +I G P L+L+ L +                     P  ++  IA++ Y++A++ 
Sbjct: 56  YIQ--IIQGTPVLILLFLSFY-----------GLAIFGYKLPPMVAATIAMTIYSSAYLG 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R  + AVP  Q EA+ AL +T  +  R V+LPQA+R  +PP     + ++KN+S+A 
Sbjct: 103 EIWRGCIEAVPVPQWEASTALAMTRWQQLRYVILPQAVRISLPPTVGFLVQIVKNTSIAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G  +L   G  + N T Q   +  I   IY      ++ F   L  K     
Sbjct: 163 IIGLVELAQAGKLVSNATFQPFLVFPIVAGIYFVFCYPLSRFAFALERKYHAHR 216



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 33/102 (32%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L+    +   I G +V   R S    +  +  VY+++ +  P L+++F  
Sbjct: 13  LLEAARWTLLLSALAFLGGGIAGFIVALMRTSHLAPLRLLSAVYIQIIQGTPVLILLFLS 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +  +          +     M + +             A   
Sbjct: 73  FYGLAIFGYKLPPMVAATIAMTIYSSAYLGEIWRGCIEAVPV 114


>gi|253690633|ref|YP_003019823.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251757211|gb|ACT15287.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 242

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 111/227 (48%), Gaps = 11/227 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                +FP   +   A   + S + G+  +   T L        G    LL +       
Sbjct: 12  YLMWGTFPEGPLGGAALTLLMSLLAGVASAALGTILGVALAMSRGVWSALLAMVLGFFRA 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A
Sbjct: 72  IPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ +A ++LGL+  +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  
Sbjct: 122 IGRGQWQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTF 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   + N++    +E+ L    +Y    + + L  NR+NA+   +EK
Sbjct: 182 LATQVNNRSMVYPMEVFLFVALVYFVFCLSLELLANRVNARFNQQEK 228


>gi|29831772|ref|NP_826406.1| amino acid ABC transporter permease protein [Streptomyces
           avermitilis MA-4680]
 gi|29608889|dbj|BAC72941.1| putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces avermitilis MA-4680]
          Length = 249

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 13/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +    ++ V+S  LG V++ F   L+R       + L   Y   F   G   L
Sbjct: 9   WELLLKGVWITVQLTVYSAALGAVVA-FTVGLARTHRLWVVRFLSGAYFEVF--RGTSAL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+     + F  P+   +  +          +  + L C   A+ +EIVR  + AV   
Sbjct: 66  VLML---WVFFVVPLTLGWQLV-------PMWAAVLTLGCTYGAYGSEIVRGAVAAVAPA 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA IAL  T  +  R ++LPQA   ++PP  +  + LLK ++L   +G  D+      
Sbjct: 116 QREAGIALSFTPAQRLRKIILPQAWPEMVPPFNNLLIELLKGTALVSVLGVGDITFAAQL 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + N TGQ+  +  + + +Y  L+ ++   M  +  +
Sbjct: 176 VRNATGQSAPVYTVILVMYFVLAFLLTRVMRLVERR 211



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 29/79 (36%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L         ++   VG  R     +V ++   Y EVFR    LV++
Sbjct: 9   WELLLKGVWITVQLTVYSAALGAVVAFTVGLARTHRLWVVRFLSGAYFEVFRGTSALVLM 68

Query: 146 FFLYKSVLSVLPIPDHSIV 164
            +++  V   L      + 
Sbjct: 69  LWVFFVVPLTLGWQLVPMW 87


>gi|296877049|ref|ZP_06901090.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431910|gb|EFH17716.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 266

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 96/248 (38%), Gaps = 9/248 (3%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + +             L          +    +T+        F  +  +V +L      
Sbjct: 11  WYADFLKHIPDSKLFSLRAVFDAFPSVIGKLPVTILLALGGAFFGIIFAMVFALVKINRV 70

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEF 266
           R  +       P+  +    + G P LV + L Y       K +   +         P  
Sbjct: 71  RILY-------PIQAVFVSFLRGTPLLVQLMLTYYGIPLILKAINQSYGTAFNINAIPAE 123

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +   +AL+   AA+ +E +R+ +++V  G++EAA +LG+T+R+    +++P A     P 
Sbjct: 124 LFAIVALAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNRQVYHRIIIPNAAVVATPT 183

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + L K +SLA +    ++ +    I     +  E  +    +Y  ++I+I +   
Sbjct: 184 LINSLIGLTKGTSLAFSASVVEIFAQARIIGGSDLKYFERFITVSIVYWIVNILIEILGR 243

Query: 387 RLNAKIAL 394
            +  ++ +
Sbjct: 244 HIERRLDI 251


>gi|163743506|ref|ZP_02150884.1| amino acid ABC transproter, permease protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383209|gb|EDQ07600.1| amino acid ABC transproter, permease protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 224

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 12/185 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFM 267
           R         L +L+IS F   G P LV + L Y  L     VL Q N +          
Sbjct: 45  RVLRIPVLDQLVVLFISFF--RGTPLLVQLFLFYYGLPQVLSVLTQINGVS--------- 93

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+ + AA++AE +R+ ++ V R Q EAA ++G+T  +  R ++LPQA R   P L
Sbjct: 94  AAIMGLTLHFAAYMAESIRAAILGVDRSQWEAAQSIGMTRGQMMRRIVLPQAARIAAPTL 153

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +++++K +SLA  +G  +++         +    E  L+   IY  L   ++L   R
Sbjct: 154 VNYFIDMIKGTSLAFTLGVTEMMGATQKEAAGSFLYFEAFLVVAVIYWILVEALSLVQRR 213

Query: 388 LNAKI 392
           L   +
Sbjct: 214 LEIHL 218


>gi|238797860|ref|ZP_04641352.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia mollaretii ATCC 43969]
 gi|238718276|gb|EEQ10100.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia mollaretii ATCC 43969]
          Length = 245

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 113/228 (49%), Gaps = 8/228 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTF 227
                  LT+  +A   V S +LG +L+      +R             +  PLL    F
Sbjct: 18  WLWDGFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYSTLFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             F     +  +    L  + P   +   +  S  S EF++ +I L+ Y+ AFIAE +RS
Sbjct: 78  WYFAASQFLPASWIPWL--NSPHEIRAFGLTLSWPSFEFLAGFIGLTLYSTAFIAEELRS 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A
Sbjct: 136 GISGVAKGQKYAAQALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      +  +T +  +   +   +Y+++  +I  +      + A++
Sbjct: 196 ELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQRTAVR 243



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 42/89 (47%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ +T++G L+ A R S N+ + W    Y  
Sbjct: 5   HLTDWLLAPQYLGWLWDGFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +    LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQFLPASWIPW 93


>gi|229154344|ref|ZP_04282464.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 4342]
 gi|228629168|gb|EEK85875.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 4342]
          Length = 214

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 114/217 (52%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +        F +  G          F++  +  L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILG----------FIVEVIRNL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P +G    I          ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 66  PLLLIIFFTYFALPEVGLKLEI--------ITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++  V
Sbjct: 68  LLIIFFTYFALPEV 81


>gi|239817009|ref|YP_002945919.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239803586|gb|ACS20653.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 231

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 21/244 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHF 211
           +P     L      ++  ++   L++   A   V +  + +V++L         R     
Sbjct: 1   MPLFDYSLLLTGKYHDMLVAGLWLSLQLLAASLVLALPIALVVALLRLSPLAPLRWLGFA 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + ++ + +PLL    F  FG P L+   +K  L+                   E  S  I
Sbjct: 61  YVESIRNIPLLAHMLFWYFGAPELLPEGIKQWLYAG---------------HIEAYSAII 105

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           ALS YTAAF+AE +RSG+ A+P  Q+EA  ALG +     R V+LPQA+R  +PPL SQ 
Sbjct: 106 ALSLYTAAFMAEDIRSGIRAIPTVQLEAGRALGFSFLGTMRRVVLPQALRVTVPPLISQT 165

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+L KN+S+A  +G A+L+   G + + + ++ E        YL++S+ I       + +
Sbjct: 166 LSLWKNTSIATVIGVAELMYQAGQVESASFRSFESFAFASAAYLTVSLAITGLATWYHHR 225

Query: 392 IALK 395
             ++
Sbjct: 226 FPVR 229



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ G   +  L  + ++ A  I  +V   RLS    + W+   YVE  RNIP 
Sbjct: 11  TGKYHDMLVAGLWLSLQLLAASLVLALPIALVVALLRLSPLAPLRWLGFAYVESIRNIPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L  + F Y     +LP      +    +   +  ++    T    A
Sbjct: 71  LAHMLFWYFGAPELLPEGIKQWLYAGHIEAYSAIIALSLYTAAFMA 116


>gi|167840667|ref|ZP_02467351.1| ABC transporter, inner-membrane component [Burkholderia
           thailandensis MSMB43]
          Length = 220

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 105/233 (45%), Gaps = 14/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + +P  +      L        T   +   +   G  + +F   +S   H +  +    +
Sbjct: 1   MNVPDLLTRCAGYLPQLLDGALTTLWLSAVAVGCGFFVGVFVHTMS-VSHSRLLRGAARV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S  ++ G P L  + + Y +                   P F++  I LS  T A+ +
Sbjct: 60  YVS--VLRGTPVLAQLLVFYYVPSAL-----------GIELPGFVAAAIGLSLNTGAYQS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           +I+ +G  A+  GQ+EAA+   LT R+    + +PQ MR+ +P L S+ ++++K S++  
Sbjct: 107 QILGAGFRAIAPGQIEAALTFNLTRRQVLWHIEVPQVMRATLPALVSEMIDIVKASAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   DL+ VG  + + + + +E+  +    YL+++ ++A   +    + A +
Sbjct: 167 VISVTDLMRVGQQLSSSSYRPLEVYSLAAVFYLAITSLLACAGHVFARRTARR 219



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 38/105 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T WL+   +     +G  V    +S ++L+    RVYV V R  P L  
Sbjct: 13  YLPQLLDGALTTLWLSAVAVGCGFFVGVFVHTMSVSHSRLLRGAARVYVSVLRGTPVLAQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +   Y    ++       +    G+ LN        L     A  
Sbjct: 73  LLVFYYVPSALGIELPGFVAAAIGLSLNTGAYQSQILGAGFRAIA 117


>gi|187919665|ref|YP_001888696.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187718103|gb|ACD19326.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 218

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F          L       + + +FV G ++ L    + R       + + ++Y+  F  
Sbjct: 4   FTLWDIARNLLLAARWTVLLSLIAFVGGGIVGLILLAM-RVSPIAWLRRIVVVYVEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L              +++  + L+ YT+A++ +I R  +
Sbjct: 61  QGTPLLMQLFLAF---FGLPLL--------GVDVSPWVAATVTLTLYTSAYLVDIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ  A  +LG+T  +  R ++ PQA +  + P     + ++K+++LA  +GF +L
Sbjct: 110 EAVPRGQWSAGASLGMTFGQQLRYIVWPQARKIAVAPTVGFLVQVVKSTALASIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  I N   +   I  +   IY ++   +  +   L  +  + + +
Sbjct: 170 TKTGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVLEKRQKVGQHR 218



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L+    T  L+    +   I+G ++ A R+S    +  I  VYVEVF+  P L
Sbjct: 7   WDIARNLLLAARWTVLLSLIAFVGGGIVGLILLAMRVSPIAWLRRIVVVYVEVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  +       +     + L               A
Sbjct: 67  MQLFLAFFGLPLLGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111


>gi|330811532|ref|YP_004355994.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379640|gb|AEA70990.1| Putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 365

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 33/294 (11%)

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           T+   ++G   L  ++       +Y   F  + P++    L+  V  +  +         
Sbjct: 102 TVWLAVIGVAPLFISRFPRK--AIYGLSFLVLYPIIAWCLLHGGVFGLDAVATSQ----- 154

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
                        LT+       V +  LGIVL+L      R  +    + + + +I  +
Sbjct: 155 --------WGGLMLTLVIATVGIVGALPLGIVLAL-----GRRSNMPAIRVVCVTFIEFW 201

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               L T VL      L    P    F+         + +   I +  + +A+IAE+VR 
Sbjct: 202 RGVPLIT-VLFMSSVMLPLFLPEGMNFD---------KLLRALIGVILFQSAYIAEVVRG 251

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + ++ L K++SL + +G  
Sbjct: 252 GLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLF 311

Query: 348 DLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           DL++            G A E  +    ++      ++ +   L  K+    K+
Sbjct: 312 DLLNSVKQAAADPKWLGMATEGYVFAALVFWIFCFGMSRYSMHLERKLDTGHKR 365


>gi|319778957|ref|YP_004129870.1| Glutamate Aspartate transport system permease protein GltK
           [Taylorella equigenitalis MCE9]
 gi|317108981|gb|ADU91727.1| Glutamate Aspartate transport system permease protein GltK
           [Taylorella equigenitalis MCE9]
          Length = 356

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 14/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+F  +   +     +     + +F  +    L +    L R  H    +AL   YI
Sbjct: 131 MYGGVFGLSHVETARWGGLPITLMLSIFGIMFATPLGIIL-ALGRRSHMPLIRALSTSYI 189

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                    +L+ +A          V+    F  G T + + +   +A+  Y +A+IAE+
Sbjct: 190 ELVRGVPFVSLLFMA---------SVMVPLFFPEGVTFN-KLLRAQLAVIIYMSAYIAEV 239

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL ++P+GQ E A +LGL++ +  RL++LPQA+  +IPPL S ++++ K++SL V +
Sbjct: 240 VRGGLQSIPKGQYEGAKSLGLSYWQYMRLIILPQALTVVIPPLVSIFISIFKDTSLVVII 299

Query: 345 GFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  DL       ++    +G  +E  +   FIY      ++ +   + A++    + 
Sbjct: 300 GIYDLTLSAKVALSDPQWSGLGLEAYVFLAFIYFIFCFAMSKYSRYIEARLRTGHRH 356



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           TA   G   T  L+  G++ AT +G ++  GR S   L+  +   Y+E+ R +P + ++F
Sbjct: 143 TARWGGLPITLMLSIFGIMFATPLGIILALGRRSHMPLIRALSTSYIELVRGVPFVSLLF 202

Query: 147 FLYKSVLSVLPIPDHSIVL 165
                V    P       L
Sbjct: 203 MASVMVPLFFPEGVTFNKL 221


>gi|145298732|ref|YP_001141573.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851504|gb|ABO89825.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 265

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 107/241 (44%), Gaps = 21/241 (8%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-VLSLFATRLSRHF 211
                +         G F     LS   +T+         + V+G  V+SL      R  
Sbjct: 38  WQWQRVGPFLGEWEDGDFYPGPLLSGFLVTLQVALLSLAGTLVVGCSVVSL------RLL 91

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             + G  L + Y    L+   P LV + + Y L            +G            +
Sbjct: 92  PSRLGPWLAVTY--LALVRTTPQLVQLYILYFL------------LGPMLGLAPLACAVL 137

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           +LS Y  AF AE++R+G+ A+P GQ EAA +LGL+     R V+LPQ +R ++PPLT++ 
Sbjct: 138 SLSLYQGAFTAEVLRAGIQAIPSGQWEAARSLGLSRAITLRKVILPQLVRIVLPPLTNEL 197

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L+K+S+L   +   DL + G T++  T    E+      +YL L++ ++     L   
Sbjct: 198 VSLIKHSALVSVIAIFDLTNEGRTLVADTFLTFEVWFTVAALYLLLTLTLSACSRALARH 257

Query: 392 I 392
           +
Sbjct: 258 L 258



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +   +  +     Y   +L GF+ T  +A   +    ++G  V + RL  ++L  W+   
Sbjct: 43  VGPFLGEWEDGDFYPGPLLSGFLVTLQVALLSLAGTLVVGCSVVSLRLLPSRLGPWLAVT 102

Query: 132 YVEVFRNIPPLVVIFFLYK 150
           Y+ + R  P LV ++ LY 
Sbjct: 103 YLALVRTTPQLVQLYILYF 121


>gi|319782303|ref|YP_004141779.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168191|gb|ADV11729.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 255

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 102/245 (41%), Gaps = 3/245 (1%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--FSFVLGIVLSLFATRLSRHFHE 213
                 +  + FG++          +    +  I V   S   G+V+ +    L +    
Sbjct: 12  WHDKTRATQMEFGLWQVWEAGWVTAILRGASITILVGLVSMAAGLVIGIV-CGLIKWARI 70

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
                L   Y S         ++ +     + F   V+  F + G +     F+   IA+
Sbjct: 71  FPLSLLVDAYTSLVRGVPELLIIYLLFFSSVEFVTKVVTAFGYAGVAESGYAFVIAVIAI 130

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              + A+  E+VR  L A+P G +EAA ALGL+  +  R ++ PQ +R  +P + + +  
Sbjct: 131 GAISGAYSTEVVRGALGAIPNGHIEAARALGLSGGRIFRRIIAPQMLRIAVPGINNVWQT 190

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +K+++L   VG  +L+ +     N T       LI   +YL+++++     + +   + 
Sbjct: 191 TIKDTALVSVVGLQELMRISFIGANSTRHPFIFYLIAAVVYLAITLVSQAGFDGIERLLR 250

Query: 394 LKEKK 398
           ++ +K
Sbjct: 251 VRTRK 255


>gi|78065232|ref|YP_368001.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77965977|gb|ABB07357.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia sp. 383]
          Length = 246

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  LY+S F    +P +V   + Y  +    P             +  F +  I L
Sbjct: 61  WLSAIGTLYVSIF--RNIPLIVQFFVWYLVIPELLPASIGTWIKQLPPTTQFFTASIICL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMSFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            +YV +FRNIP +V  F  Y  +  +LP    + +
Sbjct: 67  TLYVSIFRNIPLIVQFFVWYLVIPELLPASIGTWI 101


>gi|261838312|gb|ACX98078.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           51]
          Length = 237

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K        Y+S  LI G P LV I + + 
Sbjct: 41  PLAIISFILGLFIAVLVALIKIAPPKHFIHKALLVGVNFYVS--LIRGTPLLVQIVVVF- 97

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 98  --YGLPAL--------GVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 148 GLNYLQTFWHVIFFQALKVATPSLSNIFISLFKETSLASVVTIAEVFRIAQQKANASYDF 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 208 LPIYLEAALIYWLFCLVLEVIQKRVEK 234


>gi|229148980|ref|ZP_04277225.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1550]
 gi|228634520|gb|EEK91104.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1550]
          Length = 214

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYTKIPVVSQVLGVIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|104781004|ref|YP_607502.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95109991|emb|CAK14696.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 235

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 2/191 (1%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++       +    LY  T LI  +P LVLI L +                       F 
Sbjct: 44  AKLSRSPLLRLPATLY--TTLIRSVPDLVLILLIFYSMQIWLNDLTEALGWDYVEIDPFG 101

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L     A+  E  R  +++VP GQ+EAA A GL+  +  RLVL PQ MR  +P L
Sbjct: 102 AGVITLGFIYGAYFTENFRGAILSVPAGQLEAATAYGLSRAQRFRLVLFPQLMRFALPGL 161

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L LLK+++L   +G ADLV         T   +  + +   +YL ++ +       
Sbjct: 162 GNNWLVLLKSTALVSIIGLADLVKAAQNAGKTTNDVLFFLSLAGLVYLLITTLSNRLFKH 221

Query: 388 LNAKIALKEKK 398
           L  +  +  K+
Sbjct: 222 LERRYNIGIKE 232


>gi|229514446|ref|ZP_04403907.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229526418|ref|ZP_04415822.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229336576|gb|EEO01594.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229348426|gb|EEO13384.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
          Length = 266

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYTWQWHRVPEYVLIFEDGEWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFAALQMILVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGE 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|146306126|ref|YP_001186591.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145574327|gb|ABP83859.1| L-ornithine ABC transporter membrane protein / L-arginine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 231

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 10/173 (5%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ I  S + P F        +A +  T+
Sbjct: 55  WLYTYVIRGTPMLVQLFLLYY------GLAQFDVIRDSFMWPYFSSATFCACLAFAINTS 108

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  +  R +LLP AMR  +P  +++ + +L  +
Sbjct: 109 AYTAEILAGSLKATPPGEIEAARAMGMSRAQLYRRILLPSAMRRALPQYSNEVIMMLHTT 168

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   DL     TI +Q     E  +     YL L++ +         +
Sbjct: 169 SLASLVTLIDLTGAARTISSQYYMPFEAFITAGLFYLVLTVGLVRLFKYAELR 221


>gi|293391346|ref|ZP_06635680.1| histidine transport system permease protein HisQ [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951880|gb|EFE01999.1| histidine transport system permease protein HisQ [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 220

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 9/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +   S           + V S VLG++L +    L  +     GK +    +   L+ 
Sbjct: 1   MFSDYFSLMFTAALMTLGLAVCSLVLGLILGMLFAVLEANRF--VGKPMA---VFVALLR 55

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L Y    +   +      G       F     AL    AA+ ++ +R  + 
Sbjct: 56  GLPEILVVLLVYFGSSEVVEM----ITGDYIEFGAFGCGVFALCLIFAAYASQTLRGAIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +GQ E+  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 112 AIAKGQWESGAALGLSKGYTFIHIVMPQVWRYALPGLSNQWLVLLKDTALISLIGVDDLM 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I   T Q      I   IYL ++++  + + +L  +    E+
Sbjct: 172 RQAQLINTNTHQPFTWYGIAALIYLLVTLVSQVGIRKLELRFTRFER 218


>gi|302561351|ref|ZP_07313693.1| ABC transporter permease [Streptomyces griseoflavus Tu4000]
 gi|302478969|gb|EFL42062.1| ABC transporter permease [Streptomyces griseoflavus Tu4000]
          Length = 278

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 108/252 (42%), Gaps = 20/252 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           VI F   +    L        +   MF +   L+     + T    F     LG++++L 
Sbjct: 37  VIAFAVSADWGRLKNQFAQADIAERMFPDVITLALKNTVLYT-VTGFAVGLALGMLIALM 95

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       + L  +YI  F       L+ I +   +    P         G    
Sbjct: 96  -----RLSSVGPYRWLAGIYIEIFRGLPA-LLIFIFIGVAVPLAFPGTEIVGGTYGKVAL 149

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              +            ++AE +R+G+ AVP+GQMEAA +LG +  +A   +++PQA R I
Sbjct: 150 ALGLVAAA--------YMAETIRAGIQAVPKGQMEAARSLGFSPARAMVSIIIPQAFRII 201

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +PPLT++ + L K+SSL + +G      +L   G  + +QT  +  I L+    YL +++
Sbjct: 202 LPPLTNELVLLFKDSSLVLFLGVTLEERELSKYGRDLASQTANSTPI-LVAGLCYLLITV 260

Query: 380 MIALFMNRLNAK 391
            +   + R+ AK
Sbjct: 261 PLGFVVRRMEAK 272



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 8/93 (8%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL 124
           ++ A  +I + + P          I +   NT     +G      +G L+   RLS+   
Sbjct: 51  NQFAQADIAERMFP--------DVITLALKNTVLYTVTGFAVGLALGMLIALMRLSSVGP 102

Query: 125 VAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             W+  +Y+E+FR +P L++  F+  +V    P
Sbjct: 103 YRWLAGIYIEIFRGLPALLIFIFIGVAVPLAFP 135


>gi|297559646|ref|YP_003678620.1| polar amino acid ABC transporter inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296844094|gb|ADH66114.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 380

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 5/257 (1%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL        +  +V P  + +               +    +       + + VL I+ 
Sbjct: 56  PLTWGPLGDPATWAVNPAGEWASDKWAPFLQPATWTDYVVPGLQNTLTAALTASVLAILF 115

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L    + R   +   +      +  F   G+P L+LI     L      +  F+   G+
Sbjct: 116 GLVFG-IGRLSDKWWIRVPAGAVVEFF--RGIPLLMLIFFTMALPIVAYQM--FDIPAGT 170

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  ++   L+ Y  + +AE+ R+G++AVP+GQ EAA A+G+T  +  RL+L+PQA+
Sbjct: 171 FQVSALAAVVTGLTLYNGSVLAEVFRAGVLAVPKGQSEAAQAIGMTRGQNMRLILIPQAI 230

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            +++P + +Q + LLK+S+L   + F +++     +  + G  I   +I   IY+++++ 
Sbjct: 231 TAMMPAIVAQLVVLLKDSALGYIIAFPEMLRSFTLLATREGNVIPAAIICAAIYIAINLS 290

Query: 381 IALFMNRLNAKIALKEK 397
           ++     L  + A + +
Sbjct: 291 LSRVAIWLERRNARRGR 307



 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSL----GIGFLSERAGFEID---- 73
            R  N    ++   L  +            +  +  SL      G L + A + ++    
Sbjct: 16  ARRRNALYTVVTVFLALIGLAVLYLGFNGTLRDTGFSLFNPLTWGPLGDPATWAVNPAGE 75

Query: 74  ---QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
                  P+   +++   ++ G  NT   A +  + A + G + G GRLS    +     
Sbjct: 76  WASDKWAPFLQPATWTDYVVPGLQNTLTAALTASVLAILFGLVFGIGRLSDKWWIRVPAG 135

Query: 131 VYVEVFRNIPPLVVIFFLY 149
             VE FR IP L++IFF  
Sbjct: 136 AVVEFFRGIPLLMLIFFTM 154


>gi|296127369|ref|YP_003634621.1| polar amino acid ABC transporter, inner membrane subunit
           [Brachyspira murdochii DSM 12563]
 gi|296019185|gb|ADG72422.1| polar amino acid ABC transporter, inner membrane subunit
           [Brachyspira murdochii DSM 12563]
          Length = 216

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 106/231 (45%), Gaps = 16/231 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + +      L    +T+       +FS  L ++ +       +           +  I
Sbjct: 1   MDYVISTTLYLLKGTYITLCLYFVTAIFSLPLSMLFAALQFSAPKFIRY-------IFDI 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             ++  G P ++ +   Y   +  P++            P F S  +      +A++ EI
Sbjct: 54  YAWIFRGTPLILQLIFFY---YGLPLMTN-----NMIAFPAFTSAAVTFILNYSAYLMEI 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ ++ +GQ EA  AL L++R+    ++LPQA+R ++PPL+++ +NL+K+++L + +
Sbjct: 106 FRAGIESIEKGQYEAGFALNLSYRQIMTRIILPQAVRRVLPPLSNEAINLIKDTALVIVL 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  DL+     I+ +  + +    I   IYL  + ++ L   +L  K  ++
Sbjct: 166 GIGDLMLHARQILTRDYKLLP-FFIAAIIYLLFTSILVLVFRQLEKKYVIR 215


>gi|124027569|ref|YP_001012889.1| glutamine transport system permease protein glnP [Hyperthermus
           butylicus DSM 5456]
 gi|123978263|gb|ABM80544.1| glutamine transport system permease protein glnP [Hyperthermus
           butylicus DSM 5456]
          Length = 233

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A  F   F LG ++++      R +  +  + L   Y+   LI G P L+ + + Y  
Sbjct: 30  LTAASFTMGFALGTLIAI-----GRLYGPRPLRWLLAGYVE--LIRGTPMLLQLFILYY- 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  + +   +AA+ +E +R+ L AV  GQ EAA+ALG
Sbjct: 82  ----------ALPQAGISLAAMTAAILGMGLNSAAYQSEYLRASLRAVHTGQWEAALALG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +A   ++LP  +R+ IP LT++ + LLK SS+A  +   +LV  G  I ++T   +
Sbjct: 132 MTRWQAITSIILPIGLRTAIPALTNELVYLLKYSSIAYFLAVVELVYAGKIIGSETFAYL 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E+  I   +YL+ S+ I   M RL  K+A+
Sbjct: 192 EVYTIIALVYLAFSLAITRTMKRLEKKVAI 221



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 47/117 (40%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E+ Q I    S+  Y + +  G  NT  L  +       +GTL+  GRL   + + W+  
Sbjct: 2   ELLQRIAELLSEPRYVSLLAEGIRNTLILTAASFTMGFALGTLIAIGRLYGPRPLRWLLA 61

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            YVE+ R  P L+ +F LY ++               GM LN+       L     A
Sbjct: 62  GYVELIRGTPMLLQLFILYYALPQAGISLAAMTAAILGMGLNSAAYQSEYLRASLRA 118


>gi|313890243|ref|ZP_07823877.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121348|gb|EFR44453.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 234

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 8/166 (4%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   L    P LV +   Y         G      G  +   F +  + +  Y  A+IAE
Sbjct: 68  IYVELYQNTPLLVQLVFVYY--------GLAIISRGHIMFSSFFTAILCVGVYHGAYIAE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++RSG+ AVP+GQ+EA+++ G T+ +   L++LPQA+R+I+PP+T+Q +NL+KN+S+   
Sbjct: 120 VIRSGIEAVPKGQIEASLSQGFTYEQTMSLIVLPQAVRTILPPMTNQVVNLIKNTSIVAI 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +  AD++        ++   +        +Y  +   +A +  R  
Sbjct: 180 ISGADIMFTAKAWAYESTNYVPAFAGAAILYFIMCFPLANWARRKE 225


>gi|171185752|ref|YP_001794671.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoproteus neutrophilus V24Sta]
 gi|170934964|gb|ACB40225.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermoproteus neutrophilus V24Sta]
          Length = 229

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 74/186 (39%), Gaps = 11/186 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F  +    L   Y+  F   G P LV I + Y            N          F +  
Sbjct: 44  FLPRPLPWLASAYVEAF--RGTPLLVQIFIIYFGVGGYLKDYGLNI-------DPFTAGV 94

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL   +AA+ AEI RS + A+P  Q   A A   T  +  R ++LPQA+R  +P L ++
Sbjct: 95  IALGLNSAAYQAEIFRSAVQAIPLEQYLTAEAYAFTKTQTFRYIILPQALRIALPALMNE 154

Query: 331 YLNLLKNSSLAVAVGF--ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            + L+K+SSL   +G    D+               E  L    +Y  +   +    + +
Sbjct: 155 LVLLIKDSSLVAVIGVAPPDIFRRADYYAASKFTYFEAYLAAAVVYFIICYAMVKISHHI 214

Query: 389 NAKIAL 394
             K A+
Sbjct: 215 ERKYAI 220


>gi|302540997|ref|ZP_07293339.1| amino acid ABC transporter, permease [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302458615|gb|EFL21708.1| amino acid ABC transporter, permease [Streptomyces himastatinicus
           ATCC 53653]
          Length = 277

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 14/230 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
               +        +             K+ + +FVL   L L    L+R       +A  
Sbjct: 28  WRNPMFADWTYALQDWPTYLGAAWLTLKLSLAAFVLACALGLLG-ALARRSRHALVRAPA 86

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +Y+   +I   P L+ + + Y           F             +   AL     A+
Sbjct: 87  AVYVE--VIRNTPVLLQMFVAY-----------FALPSAGLRLSPVQAGIAALGLNVGAY 133

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + EI R+G+ AVPRGQ EA+  L L+  +    V+LPQA+R++ P + +Q + ++  SSL
Sbjct: 134 LTEIFRAGIQAVPRGQSEASRVLALSPFRTFLHVVLPQALRNVYPAVINQLVQIILGSSL 193

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             A+   +L      I ++    I++  I   +YL L+  + L    +  
Sbjct: 194 LSAISVPELTGTAMVINSRNLLTIQVFGIAAVLYLVLTNAVVLVAELIGR 243



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 78  PYTSDSSY----ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           P  +D +Y        L     T  L+ +  + A  +G L    R S + LV     VYV
Sbjct: 31  PMFADWTYALQDWPTYLGAAWLTLKLSLAAFVLACALGLLGALARRSRHALVRAPAAVYV 90

Query: 134 EVFRNIPPLVVIFFLYKSVLSV 155
           EV RN P L+ +F  Y ++ S 
Sbjct: 91  EVIRNTPVLLQMFVAYFALPSA 112


>gi|163854809|ref|YP_001629107.1| putative amino acid ABC transporter permease protein [Bordetella
           petrii DSM 12804]
 gi|163258537|emb|CAP40836.1| putative amino acid ABC transporter permease protein [Bordetella
           petrii]
          Length = 366

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 36/297 (12%)

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + ATII   V           A +  ++V     +  L+    L  + +         + 
Sbjct: 103 LLATIILIGVIVCSGLRRFWNARLALIWVVGLTAVAVLMWGGVLGLTYVENSLWGGLPLT 162

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L    F                     F+F  G++L+L      R       KAL ++YI
Sbjct: 163 LILSTF------------------GIAFAFPFGVLLAL-----GRKSKMPAIKALCVVYI 199

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L +L+ ++          +L  F  +G S    + +   IA+  + AA+IAE 
Sbjct: 200 ELIRGVPLISLLFMSSV--------MLPLFLPVGFSI--DKLLRAQIAIIMFAAAYIAET 249

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL A+P+GQ E A +LGL + +  R ++LPQA+R +IPPL S ++ L K++SL V +
Sbjct: 250 VRGGLQAIPKGQYEGADSLGLNYWQQMRKIILPQALRIVIPPLVSIFIALFKDTSLVVII 309

Query: 345 GFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  DL       ++     G  +E  +    IY      ++ +  RL  ++A   K+
Sbjct: 310 GIFDLTLAAKAALSDAAWRGFGVEAYVFISLIYFVFCFSMSKYSQRLEKRLATGHKR 366


>gi|302189137|ref|ZP_07265810.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
          Length = 277

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 69  GFLQGAALTLFVSVCSIVVSVALGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 128

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 129 IYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSAGQREAAMALALRPAQIF 188

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 189 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 248

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 249 VLYWIMSIGLELLQSRLERHYG 270


>gi|167840985|ref|ZP_02467669.1| glutamine ABC transporter permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 218

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I  F    G ++ + A  + R +       L  +YI
Sbjct: 1   MQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAG-MFRAYGPAVLNVLAQVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +     L+F  P+L      G         +  +A++  + A++AE+
Sbjct: 60  E--LIRGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIVAITLNSGAYLAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++P+G  EA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +
Sbjct: 108 VRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  II    QA+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 168 GVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRI 217


>gi|227327467|ref|ZP_03831491.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 131

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/129 (33%), Positives = 80/129 (62%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IALS  + AF AE+ R  + ++  GQ E A ALG++   A R V+LPQA+R +IPP   
Sbjct: 1   MIALSAQSGAFYAEVYRGAISSIHAGQWEGAKALGMSKSTALRRVILPQALRRMIPPFIE 60

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +   L+K++SLA ++ +++L+     I +QT + +E+  +   +Y +L ++I+LF   + 
Sbjct: 61  RSFELIKSTSLASSLAYSELLYQAMQINSQTYRPLEVYSLVAVMYFTLLLLISLFSQHIE 120

Query: 390 AKIALKEKK 398
            +++L +++
Sbjct: 121 KRLSLADRR 129


>gi|167035541|ref|YP_001670772.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862029|gb|ABZ00437.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 365

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+   +  +  + ++    +     GL     +      + +    +GIV 
Sbjct: 112 PLFIKRFPRKAFYGLGFLVLYPVLAYTLLHGGYLGLDSVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R       K + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSRMPAVKVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMSFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WVFCFGMSRYSMHLERKLDTGHKR 365



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 37/80 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    S  T+   G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R 
Sbjct: 144 YLGLDSVPTSQWGGLMLTLVIATVGIVGALPLGILLALGRRSRMPAVKVVCVTFIEFWRG 203

Query: 139 IPPLVVIFFLYKSVLSVLPI 158
           +P + V+F     +   LP 
Sbjct: 204 VPLITVLFMSSVMLPLFLPE 223


>gi|296113906|ref|YP_003627844.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           RH4]
 gi|295921600|gb|ADG61951.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           RH4]
 gi|326562227|gb|EGE12555.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           7169]
 gi|326567181|gb|EGE17303.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           BC1]
 gi|326572017|gb|EGE22019.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           BC8]
 gi|326573964|gb|EGE23914.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           O35E]
 gi|326574955|gb|EGE24885.1| amino acid ABC transporter permease protein [Moraxella catarrhalis
           101P30B1]
          Length = 240

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 1/183 (0%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +       + +   Y +T +      L++  + +        + +     G     +F +
Sbjct: 40  KLSGVWILQKIADAY-TTIVRGIPELLMVFFIFFGGSIILVTIAKQMGYTGRIDVSQFWA 98

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              ALS    A+  E+ R  +  +P+GQ E+A ++G+T  +    ++LPQ     +P L 
Sbjct: 99  GVTALSIMFGAYATEVFRMAIQDIPKGQWESAQSIGMTPIQTLTRIILPQMWMVALPGLG 158

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  L LLK+++L   +G  DL+         T +     L   FIYL+L+ +I LF+   
Sbjct: 159 NLTLVLLKDTALVSLIGLQDLMYFAQRAAQSTQKPFTFYLAAAFIYLALTSVITLFIMWC 218

Query: 389 NAK 391
            ++
Sbjct: 219 ESR 221



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 42/106 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T  L  + ++   + G L    +LS   ++  I   Y  + R IP L++
Sbjct: 7   YGPILLQGTILTIKLGLASLVFGLLFGLLGALAKLSGVWILQKIADAYTTIVRGIPELLM 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +FF++     +L      +     + ++        L++   A   
Sbjct: 67  VFFIFFGGSIILVTIAKQMGYTGRIDVSQFWAGVTALSIMFGAYAT 112


>gi|323529853|ref|YP_004232005.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386855|gb|ADX58945.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 251

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 12/193 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R             YI  F   G P L+ + L Y        +GQF  I  S + P    
Sbjct: 44  RVSPHWLPNRFARAYILVF--RGSPLLIQMFLVYY------GMGQFGVIRESFLWPVLRE 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+     R V+ P A+R  +
Sbjct: 96  PYLCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ +I   
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVIVRA 215

Query: 385 MNRLNAKIALKEK 397
           +  L A+++   +
Sbjct: 216 LGLLEARLSRHLR 228



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L F  +I   ++  ++   R+S + L     R Y+ VFR  P L+ +F +
Sbjct: 15  LLAAVPTTLGLFFCSLILGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLV 74

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  +     I +  +  
Sbjct: 75  YYGMGQFGVIRESFLWP 91


>gi|319940826|ref|ZP_08015165.1| glutamate/aspartate transport system permease gltJ [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805708|gb|EFW02489.1| glutamate/aspartate transport system permease gltJ [Sutterella
           wadsworthensis 3_1_45B]
          Length = 244

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 7/221 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+      F+ + VLGI++        R    K  +     +I  F   
Sbjct: 21  WWRYILDGAGWTVGLAVSAFLLALVLGIIVGTL-----RTSPIKIVRGACEAWIELF--R 73

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P +V I + Y +  +     +   I       +FM+ +I +  +T++ IAE VR+G+ 
Sbjct: 74  NIPLIVQIFIWYFVVPEIIPWYKDWMIEADPAIAQFMTAFICMGFFTSSRIAEQVRAGIA 133

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++PRG   AA ALG T  +    V+LP AMR I+PPLTS+ +NL+KN+++A+ +G  +L 
Sbjct: 134 SIPRGLPNAAKALGFTTVETYVYVILPMAMRLIVPPLTSEAMNLVKNTAVAMTIGLPELT 193

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                +   T Q     L    +Y+ +++++   M  + ++
Sbjct: 194 MRANEMGENTFQFFAAYLWATILYIVIALVVNRVMTLIESR 234



 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 44/104 (42%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            SD  +   IL G   T  LA S  + A ++G +VG  R S  K+V   C  ++E+FRNI
Sbjct: 16  LSDDPWWRYILDGAGWTVGLAVSAFLLALVLGIIVGTLRTSPIKIVRGACEAWIELFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           P +V IF  Y  V  ++P     ++                   
Sbjct: 76  PLIVQIFIWYFVVPEIIPWYKDWMIEADPAIAQFMTAFICMGFF 119


>gi|311695085|gb|ADP97958.1| amino acid ABC transporter, permease protein [marine bacterium
           HP15]
          Length = 362

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 16/263 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P  +  F  +  L +  I    IV  F +   + GL     +      + +    +GI+ 
Sbjct: 109 PQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIA 168

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           SL       L R       + + +++I  +    L T VL      L    P    F   
Sbjct: 169 SLPIGILLALGRRSDMPIIRGICVVFIEVWRAVPLIT-VLFMASVMLPLFLPEGVNFE-- 225

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  +     I ++ + +A++AE++R GL A+PRGQ EAA ALGL + +   LV+LP
Sbjct: 226 -------KLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMGLVILP 278

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIY 374
           QA++ +IP + + +++L K+++L + +G  D++    + +        AIE  +   F +
Sbjct: 279 QALKMVIPGIVNTFISLFKDTTLVLIIGLFDILGTVQSTVTDPAWQNVAIEGYVFVAFCF 338

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
                 I+ +   L  K+    K
Sbjct: 339 WVFCFGISRYSQNLERKLDTGHK 361



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 39/74 (52%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA+ G+I +  IG L+  GR S   ++  IC V++EV+R +P + V+F     
Sbjct: 154 GLMLTLILAYIGIIASLPIGILLALGRRSDMPIIRGICVVFIEVWRAVPLITVLFMASVM 213

Query: 152 VLSVLPIPDHSIVL 165
           +   LP   +   L
Sbjct: 214 LPLFLPEGVNFEKL 227


>gi|254933324|ref|ZP_05266683.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|293584885|gb|EFF96917.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
          Length = 238

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +       L  +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLL-SLPRIYKIPVLDQLARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSIVGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL+ R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGKGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKWIEKRVKKENTR 229



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 35/75 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G L+   R+    ++  + RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVLLSLPRIYKIPVLDQLARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             I    +     ++
Sbjct: 84  SSIVGIDLSQMDPLY 98


>gi|149908406|ref|ZP_01897069.1| amino acid ABC transporter, permease protein [Moritella sp. PE36]
 gi|149808569|gb|EDM68504.1| amino acid ABC transporter, permease protein [Moritella sp. PE36]
          Length = 370

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 66/331 (19%), Positives = 128/331 (38%), Gaps = 21/331 (6%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT--IIGTLVGAGRLSANKLVA 126
           GF      +P   D     A   G         +  I         + G    S +    
Sbjct: 50  GFYFIYTTIPPLLDWMIFDATWSGTKEEVVKEGARWIFIIEKFDQFMYGFYPESLHWRPN 109

Query: 127 WICRVYVEVFRNIPPL--VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
            +  + +     +P L  + +  +   +   +     S        +         LT+ 
Sbjct: 110 LVAVISLAFVFLVPRLKNIKVKLVIMLLFPFVCFVLISGGWFGLEVVGTEKWGGLMLTIL 169

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + SF +GI+L+L     +        K L + +I            LI + +  
Sbjct: 170 VAAVGIIASFPIGILLALGRQSDN----MPIVKFLCIGFIEFIRGVP-----LITILFMA 220

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P+     F        + +   I ++ + AA+IAE++R GL A+P+GQ EA+ +LG
Sbjct: 221 SVVLPL-----FFSDGIDFDKLLRALIGITLFQAAYIAEVIRGGLQAIPKGQYEASESLG 275

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---G 361
           LT+ +   L++LPQA++  IP L   +++L K+++L + +G  D++++     + T   G
Sbjct: 276 LTYWQGMILIILPQALKISIPNLVGSFISLFKDTTLVLIIGLFDILAMVTLTNSDTNWLG 335

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             IE  +    IY      ++ +   +  + 
Sbjct: 336 FEIEGYVFVTMIYWVFCFSMSQYSRVIERRY 366


>gi|28871315|ref|NP_793934.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213970848|ref|ZP_03398971.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301384516|ref|ZP_07232934.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060678|ref|ZP_07252219.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302130491|ref|ZP_07256481.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28854566|gb|AAO57629.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213924371|gb|EEB57943.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 221

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+   +   V   VLG VL+L      R    K    +   Y++ F      ++
Sbjct: 14  WNGMVMTLKLMSLGIVGGLVLGTVLALM-----RLSSNKLLANVAGAYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 64  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 123 QMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 183 SGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV 221



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   ++GT++   RLS+NKL+A +   YV  FR+IP L+VI + 
Sbjct: 13  LWNGMVMTLKLMSLGIVGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 73  YLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEI 111


>gi|238798473|ref|ZP_04641953.1| Glutamine transport system permease protein glnP [Yersinia
           mollaretii ATCC 43969]
 gi|238717711|gb|EEQ09547.1| Glutamine transport system permease protein glnP [Yersinia
           mollaretii ATCC 43969]
          Length = 218

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +     + + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  FARAYGGWLSRNVALVFIE--LIRGTPIVVQVMFIY---FALPMMM-------PVRIDPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 90  SAAVVTIIINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217


>gi|260463005|ref|ZP_05811208.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259031126|gb|EEW32399.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 255

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 14/233 (6%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + S+L         ++  F        L      + T   +   SFV  +++ +    + 
Sbjct: 19  HYSLLPTPYSLFTPMLENFSFRTIVEYLPLFGQGLVTTVWLSALSFVGALIVGIVLCAMG 78

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                   +     YI    +   P L  +   Y L+F  P L          V PE + 
Sbjct: 79  -LQRGWLFRVPAKAYIDA--VRATPLLAQL---YFLYFGLPRL--------GFVLPELVV 124

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +ALS  + A++AEI+R+G++++PRGQ+EA++A G+T+ +  RLV+LPQA +  IPPL 
Sbjct: 125 GILALSLNSGAYVAEIIRAGILSIPRGQVEASVASGMTYVQRMRLVVLPQAFKVTIPPLL 184

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            Q + L+K+S+L   +  A+L   G  + +      E  L     YL L   +
Sbjct: 185 GQAIVLVKDSALLSLISVAELTRAGQLLASDRFMPAEGFLTIAAFYLLLYYCL 237



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 37/88 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T WL+    + A I+G ++ A  L    L     + Y++  R  P L  
Sbjct: 45  YLPLFGQGLVTTVWLSALSFVGALIVGIVLCAMGLQRGWLFRVPAKAYIDAVRATPLLAQ 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++FLY  +  +  +    +V    + LN
Sbjct: 105 LYFLYFGLPRLGFVLPELVVGILALSLN 132


>gi|288936957|ref|YP_003441016.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|330005624|ref|ZP_08305302.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|288891666|gb|ADC59984.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|328536190|gb|EGF62571.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 231

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 116/236 (49%), Gaps = 5/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F   +                ++ + +++L + ++L    + R  +++  + L   
Sbjct: 1   MALDFSNVMTGHYGQMIIDGTVVTLELALGAWLLAMFIALVL-VMIRLSNKRFAQLLVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S      +PTL+ + + Y       +L +   +  + ++ EF+   +AL    AA+ +
Sbjct: 60  YVS--YHRNVPTLIQLMMWY--FAIPTLLPESLQMWVNEMNAEFLFSLVALGLCQAAYFS 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSGL A+P GQ EAA ALG+ + +A  LV+LPQ +R+ +P + +  + L KN+SLA+
Sbjct: 116 EDIRSGLRAIPEGQNEAARALGMGYLRAMWLVILPQGIRNALPSVINHTVLLFKNTSLAM 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  +L  V   I NQT +  E  ++    YL+ S+++      L  +      +
Sbjct: 176 VIGVTELTYVTRDIENQTFRTFEAYMVATVGYLAFSLLLMGMGALLARRFQRAYAR 231



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 35/80 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I+ G V T  LA    + A  I  ++   RLS  +    +   YV   RN+P L+ 
Sbjct: 13  YGQMIIDGTVVTLELALGAWLLAMFIALVLVMIRLSNKRFAQLLVAAYVSYHRNVPTLIQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +   Y ++ ++LP      V
Sbjct: 73  LMMWYFAIPTLLPESLQMWV 92


>gi|290580364|ref|YP_003484756.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254997263|dbj|BAH87864.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 217

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LSF    +     I V SF+ G +L +F + L R       ++L  +YIS  ++ G+P L
Sbjct: 12  LSFVLTGIPYTLGISVLSFLTGCLLGIFISFL-RMSQNSWLRSLARIYIS--IMRGVPML 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ + Y           F            +  YI  S  +AA+I+EI R+ + AV +G
Sbjct: 69  VVLFVLY-----------FGLPYFEVQLSALLCAYIGFSAVSAAYISEIFRASVSAVDKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALGL      + ++LPQA R  I PL +  L++LK+SSLA  +   D+      
Sbjct: 118 QWEAARALGLPMTSILKSIILPQAFRIAIAPLGNVMLDILKSSSLAAMITVPDIFQNAKI 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           I  +    + + ++  FIY  L  +  +F N L AK+++ 
Sbjct: 178 IGGREYDYMSMYILIAFIYWLLCFLFEMFQNHLEAKLSVY 217



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  ++    +   ++G  +   R+S N  +  + R+Y+ + R +P LVV+F LY
Sbjct: 16  LTGIPYTLGISVLSFLTGCLLGIFISFLRMSQNSWLRSLARIYISIMRGVPMLVVLFVLY 75

Query: 150 KSVLSVLPI 158
             +      
Sbjct: 76  FGLPYFEVQ 84


>gi|228995974|ref|ZP_04155630.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock3-17]
 gi|229003591|ref|ZP_04161407.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock1-4]
 gi|228757633|gb|EEM06862.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock1-4]
 gi|228763747|gb|EEM12638.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides Rock3-17]
          Length = 214

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 106/206 (51%), Gaps = 19/206 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + SF++G ++                K   +  +  F++  +  L L+ + +  +F
Sbjct: 27  VVAILLSFIIGSIVGTLRYA----------KIPVVSQLLAFIVEIIRNLPLLLIIFFTYF 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P  G    I          +  +AL+ + AA I+EIVRSGL+++ +GQ+EAA A GL+
Sbjct: 77  ALPEAGLKLEIT--------TAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAARASGLS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IE 365
           + +    ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     I  Q     I 
Sbjct: 129 YIQTLWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIINGQNVNYMIP 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
            +L+   +Y  ++  ++L   +L ++
Sbjct: 189 TLLLVACMYFVVNYSLSLVSRKLESR 214



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG++VG  R +   +V+ +    VE+ RN+P 
Sbjct: 8   TGDHVLFLLKGLLVTLEIAVVAILLSFIIGSIVGTLRYAKIPVVSQLLAFIVEIIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|222081928|ref|YP_002541293.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726607|gb|ACM29696.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 217

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 13/223 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L F        A + V +F+    L  F   L+R       +     YI   ++ G P 
Sbjct: 8   HLEFLGWAAMWTAGLSVIAFLG-GGLLGFLVALARVSSSGALRTAAAAYIQ--IVQGTPL 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVL+ L Y              I G    P  ++    L  Y++ F+ EI R  + +VP+
Sbjct: 65  LVLLFLIYFGI----------AILGFDQVPAIIAAAAGLIIYSSGFLGEIWRGCIESVPK 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EAA  L L+  +    V+LPQA+R   PP     + ++KN+SLA  VGF +L   G 
Sbjct: 115 TQWEAAECLALSRWQRMIKVILPQALRIATPPTVGFLVQIVKNTSLASVVGFVELSQAGK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I N   +   + ++    Y ++   ++L+   L  K+ +  +
Sbjct: 175 LINNSIFEPFTVFIVVAVFYFAMCFPLSLWSRNLERKLNVANR 217


>gi|114706426|ref|ZP_01439328.1| polar amino acid ABC transport permease protein aapM-1 [Fulvimarina
           pelagi HTCC2506]
 gi|114538287|gb|EAU41409.1| polar amino acid ABC transport permease protein aapM-1 [Fulvimarina
           pelagi HTCC2506]
          Length = 497

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 113/265 (42%), Gaps = 18/265 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++V F   ++ +  +  P     L       +  L +    +     + +   + GI  S
Sbjct: 243 MMVGFGSGQTTIKSMVAPLVIAALFIFAMTADFDLRYVPTNLWGGLMLTLVVALSGIAAS 302

Query: 202 L---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           L       L R  H    + + +++I  +    L T VL    + L    P    FN   
Sbjct: 303 LPFGVLLALGRRSHMPAVRLICVIFIEFWRGVPLIT-VLFMATFMLPLFMPEGVNFN--- 358

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                   +   + ++ + +A++AE+VR GL A+P+GQ E A A+ L++ + TRL++LPQ
Sbjct: 359 ------SLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGADAMALSYWQKTRLIILPQ 412

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFI 373
           A++ +IP + + ++ L K++SL   +G ADL+                     +L   F+
Sbjct: 413 ALKIVIPGIVNTFIGLFKDTSLVYIIGLADLLGTVKRGFADPNWITPTTPATGLLFAAFV 472

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           Y      ++ +   +  ++    K+
Sbjct: 473 YWCFCFGMSRYSIFVERRLDTGHKR 497


>gi|30018827|ref|NP_830458.1| glutamine transport system permease protein glnP [Bacillus cereus
           ATCC 14579]
 gi|229108251|ref|ZP_04237873.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-15]
 gi|229126073|ref|ZP_04255095.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-Cer4]
 gi|229143369|ref|ZP_04271800.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST24]
 gi|296501402|ref|YP_003663102.1| glutamine transport system permease GlnP [Bacillus thuringiensis
           BMB171]
 gi|29894369|gb|AAP07659.1| Glutamine transport system permease protein glnP [Bacillus cereus
           ATCC 14579]
 gi|228640176|gb|EEK96575.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST24]
 gi|228657395|gb|EEL13211.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-Cer4]
 gi|228675267|gb|EEL30489.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-15]
 gi|296322454|gb|ADH05382.1| glutamine transport system permease protein glnP [Bacillus
           thuringiensis BMB171]
          Length = 214

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGIL-------RYTKIPVVSQVLGVIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|313617524|gb|EFR89869.1| L-cystine transport system permease protein TcyL [Listeria innocua
           FSL S4-378]
 gi|313622668|gb|EFR93035.1| L-cystine transport system permease protein TcyL [Listeria innocua
           FSL J1-023]
          Length = 238

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +          +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVIL-SLPRIYQIPVLNQFARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSVFGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL  R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSVGLNGRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYITAVLLEYSFKWIEKRVKKENTR 229



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 34/75 (45%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G ++   R+    ++    RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVILSLPRIYQIPVLNQFARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             +    +     ++
Sbjct: 84  SSVFGIDLSQMDPLY 98


>gi|301628866|ref|XP_002943567.1| PREDICTED: hypothetical protein LOC100491525 [Xenopus (Silurana)
           tropicalis]
          Length = 800

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 14/178 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L           ++ V SF+L  V+ L    L +    +   A     I+  +I GL
Sbjct: 1   MEFLPILLRGAVVTVQVTVLSFLLSSVIGLLL-ALGKLSSVRAIAACAATVIN--VIRGL 57

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + ++F  P +              F +  I L    +A+ AE  R+G+ AV
Sbjct: 58  PIIVQL---FYIYFVLPDV--------GIQLTAFQAGVIGLGIAYSAYQAENFRAGIEAV 106

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             GQ EAA+A+G+      R V+LPQA R  +PP  +  + +LK+SSL   +  A++ 
Sbjct: 107 DPGQREAALAMGMRPMLLMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMT 164


>gi|91778283|ref|YP_553491.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690943|gb|ABE34141.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 251

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R             YI  F   G P L+ + L Y        +GQF  I  S + P    
Sbjct: 44  RVSPHWLPNRFARAYILVF--RGSPLLIQMFLVYY------GMGQFGVIRESFLWPVLRE 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            +M   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+     R V+ P A+R  +
Sbjct: 96  PYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ +I   
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVIVRL 215

Query: 385 MNRLNAKIALKEK 397
           +  L  +++   +
Sbjct: 216 LGLLETRLSRHLR 228



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L F  +I   ++  ++   R+S + L     R Y+ VFR  P L+ +F +
Sbjct: 15  LLAAVPTTLGLFFCSLILGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLV 74

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  +     I +  +  
Sbjct: 75  YYGMGQFGVIRESFLWP 91


>gi|326693557|ref|ZP_08230562.1| amino acid ABC transporter permease [Leuconostoc argentinum KCTC
           3773]
          Length = 232

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 6/227 (2%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G +L     +    T+      F  + V  ++ +L                  L  I+ F
Sbjct: 9   GQYLPQLFRAALIYTLPLTIISFALALVFAVITALIRLAKLPAAPIPRLLLRGLKVIAGF 68

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            ++   +  +I   + + +  P      F         ++S     S  T A+ +E VR+
Sbjct: 69  YVWLFRSTPMIVQLFIVFYGLPSAHVTLFAN------AWLSAITVFSLNTGAYASESVRA 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VPR Q+EAA +LG+   +    V+LPQA R  IPPL++  + LLK++SLA  +   
Sbjct: 123 AISSVPRVQIEAAESLGMNRWQVFADVILPQAARISIPPLSNALIGLLKDTSLASVITIV 182

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++  +   I  +  Q + + ++  F+Y  L+ ++++  ++L    + 
Sbjct: 183 EMFYLSQQIAAENYQILTMYILAAFVYAVLTTILSIAQHQLERYTSR 229


>gi|283954500|ref|ZP_06372019.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 414]
 gi|283793904|gb|EFC32654.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 414]
          Length = 225

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I  FS +L I+L       S        +   + YI   LI G P LV + L Y +  
Sbjct: 34  LMISFFSLLLSIILGGVFCAFS-LSSIIFLRFFSIFYIE--LIRGTPLLVQVLLIYYIIA 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           +                  ++     L+C++AA++AEI R+G++++   Q+E+A ALGL 
Sbjct: 91  N-----------NLGFDNRYVVGVTILACFSAAYLAEIFRAGILSISISQLESARALGLK 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQA+++I+ PL+ Q+ NL+K+SSL   +   +L      + + T   +E 
Sbjct: 140 EIQICTYIIFPQALKNILAPLSGQFANLIKDSSLLSVIAVNELTQNAQEVNSYTFATLEA 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++    YL L++ I++    L  K 
Sbjct: 200 YVVLAIAYLILTLPISILSRYLERKY 225



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 41/87 (47%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            F I      +++  +Y      GF+NT  ++F  ++ + I+G +  A  LS+   + + 
Sbjct: 6   SFSISAYHFDFSAIITYKEKFFQGFLNTLMISFFSLLLSIILGGVFCAFSLSSIIFLRFF 65

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSV 155
              Y+E+ R  P LV +  +Y  + + 
Sbjct: 66  SIFYIELIRGTPLLVQVLLIYYIIANN 92


>gi|271502168|ref|YP_003335194.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345723|gb|ACZ78488.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 316

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 111/260 (42%), Gaps = 11/260 (4%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F       SV         +    F N   L     T+       +FS ++G  L+L  
Sbjct: 37  LFIFAGIAESVALNSRWEWSVFANYFFNPVILEGLGRTLLLTLLGTLFSVIVGTGLAL-- 94

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------GQFNFIG 258
              +R         L  LYI  F    L  +++I   +   +D   L       +F    
Sbjct: 95  ---ARLSSSTLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDTLALGIPFTAVEFFRYP 151

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
              V   F    + L+   +A+ AEI+R G++ V  GQ EAA ALGL   + T  ++LPQ
Sbjct: 152 TIDVLSPFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEAAAALGLPGYRRTWRIILPQ 211

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++    YL ++
Sbjct: 212 ALRSILPTGFNEIISLAKGTSVVYVLALPELFYTVQVIYNRTQQVIPLLMVATVWYLVIT 271

Query: 379 IMIALFMNRLNAKIALKEKK 398
            ++++    +   +A    +
Sbjct: 272 SVLSVLQYFVERYVARGAVR 291


>gi|222086235|ref|YP_002544767.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723683|gb|ACM26839.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 276

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 10/262 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +  L +  +    +  +  +  +     F  F   R L    +T+      F+   +L
Sbjct: 25  RIVGYLFLFIWALLGIALITMMITNWDNAKFFKF-GPRFLHGLWITVTLVGYSFILGAIL 83

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            I L+L     S+  +        L Y   +L  G P L  I + Y           +  
Sbjct: 84  SIPLALARMSKSKILNS-------LTYGYVYLFRGTPLLAQIFIVYYGFPQARGFLDYIG 136

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +      P F     A++  TAA+ AEIVR  + +V RGQ EAA +LGL        V++
Sbjct: 137 LWWFFRDP-FNCGLFAITLNTAAYQAEIVRGAIQSVHRGQSEAAASLGLHKLVTFYKVIM 195

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+   + P  ++ + L+K+S+    +   DL+       +QT    +  L     YLS
Sbjct: 196 PQALIVALRPYGNEIILLIKSSATVSIITVYDLMGETRYAFSQTYDY-QAYLWAAIFYLS 254

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           +  ++     R+   +    K+
Sbjct: 255 IVEVMRNGWARMEGYLTRHLKR 276



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 31/80 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  L     I   I+   +   R+S +K++  +   YV +FR  P L  IF +
Sbjct: 62  FLHGLWITVTLVGYSFILGAILSIPLALARMSKSKILNSLTYGYVYLFRGTPLLAQIFIV 121

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y          D+  +  F 
Sbjct: 122 YYGFPQARGFLDYIGLWWFF 141


>gi|330809875|ref|YP_004354337.1| Amino-acid ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377983|gb|AEA69333.1| Amino-acid ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 242

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 2/191 (1%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    K  +    LY  T LI G+P LVL+ L +        +              F+
Sbjct: 51  AKLSSIKLLRLPAQLY--TTLIRGVPDLVLMLLIFYSLQTWLTVITVALGWEYIEINPFV 108

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L     A+  E  R  ++AVPRGQ+EAA A GL+  +  R V+ PQ MR  +P L
Sbjct: 109 AGIITLGFIYGAYFTETFRGAMLAVPRGQVEAATAYGLSRAQRFRFVVFPQMMRFALPGL 168

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + ++ +LK ++L   +G ADLV         T Q    +++    YL ++ +    +  
Sbjct: 169 GNNWMVILKATALVSIIGLADLVKAAQDAGKSTYQLFFFLVLAALTYLIITSVSNFVLGC 228

Query: 388 LNAKIALKEKK 398
           L    A   ++
Sbjct: 229 LEKHYAAGSRE 239


>gi|312963774|ref|ZP_07778245.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311281809|gb|EFQ60419.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 216

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +      +     + V +FV G ++ L    + R   +   + +   YI  F  
Sbjct: 4   FSFWDIVRNLLTGLQWTLLLSVVAFVGGGLIGLLVMTM-RISRKAFARNVARTYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           +++  IAL+ +T+A++AEI R  +
Sbjct: 61  QGTPLLMQLFLVF-----------FGVALLGVDISPWLAAAIALTLFTSAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++  GQ EA+ +L L   +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 110 DSIAHGQWEASASLALNPLEQLRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              GG + N T +   +  +    Y  L   ++L    L  ++
Sbjct: 170 TKTGGMLANATFEPFMVYGLVALGYFLLCYPLSLSARYLERRL 212



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L G   T  L+    +   +IG LV   R+S       + R Y+E+F+  P L
Sbjct: 7   WDIVRNLLTGLQWTLLLSVVAFVGGGLIGLLVMTMRISRKAFARNVARTYIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +       +     + L              ++  
Sbjct: 67  MQLFLVFFGVALLGVDISPWLAAAIALTLFTSAYLAEIWRGCVDSIA 113


>gi|317050659|ref|YP_004111775.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfurispirillum indicum S5]
 gi|316945743|gb|ADU65219.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfurispirillum indicum S5]
          Length = 260

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 110/251 (43%), Gaps = 18/251 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +V+ F L    +       +           ++      +T+  +A   + S ++G++L+
Sbjct: 24  VVLCFGLSALFVYAFSALQYEWHWQVLYQYRHKLWQGWLMTVMISAISLLMSLIVGLLLA 83

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                              L      +I G P LV I + + +  D   L          
Sbjct: 84  AAQ-------RSPVILVCQLGRTIVEVIRGTPLLVQILIFFYVVADAFGLQN-------- 128

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +++  + L+ ++ A+I+EI+R+G+ ++ + Q+++A +LG T  +  R V++PQ +R
Sbjct: 129 ---RYVAGVLILALFSGAYISEIIRAGVESISQSQIDSARSLGFTPWQIYRHVIIPQVLR 185

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PPL  Q+ +L+K+SSL   +  ++       +   T   +E  L     YL L++ +
Sbjct: 186 RILPPLAGQFASLIKDSSLLSIIAISEFTLNAQEVNAFTFSTLESYLPLALGYLILTLPV 245

Query: 382 ALFMNRLNAKI 392
           +L+   +  K 
Sbjct: 246 SLYSRHMERKF 256


>gi|260102961|ref|ZP_05753198.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260083246|gb|EEW67366.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
          Length = 215

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 15/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            IF ++ +L   L +    L      K  K L   Y+  +++ G P L
Sbjct: 10  LPALFSGATMTLSIFFWTIILATPLGILV-SLGEMSKIKPIKWLVNFYV--WIMRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V P + +  +A     AA+ AEI R G  ++  G
Sbjct: 67  LQLIFVF---YGLPIIH--------IVFPRYQAALLAFVLNYAAYFAEIFRGGFQSIDEG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L+  +    +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 116 QFEAAKVLRLSRWQTMTKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNV 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + +    +  +++   IYL L  + A  + +L   ++   
Sbjct: 176 AMARD-VTLVPLVLVGVIYLLLISICAFVLKKLEKHVSYYR 215



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+  G   T  + F  +I AT +G LV  G +S  K + W+   YV + R  P L+ 
Sbjct: 9   ILPALFSGATMTLSIFFWTIILATPLGILVSLGEMSKIKPIKWLVNFYVWIMRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F++  +  +  +            LN 
Sbjct: 69  LIFVFYGLPIIHIVFPRYQAALLAFVLNY 97


>gi|238798510|ref|ZP_04641989.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia mollaretii ATCC 43969]
 gi|238717672|gb|EEQ09509.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia mollaretii ATCC 43969]
          Length = 367

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 130/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P        T +++G +          +       +   GR  
Sbjct: 77  WVFIHARFG-QFMYGLYPIEQRWRINTTLIIGLLT---------LIPLFWRGMPRRGRYL 126

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           A  +VA              PL+V   LY   L                 +        T
Sbjct: 127 AVWMVA-------------YPLLVWVMLYGGFL-------------GLSRVETHQWGGLT 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L     +R       + L + +I  +    L T++ ++ 
Sbjct: 161 LTLIIAAVGIAGALPLGILLAL-----ARRSSMPVVRILSVAFIEFWRGVPLITVLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 215 ---------SVMLPLFMTEGTSIDKLIRALVGVVLFQSAYVAEVVRGGLQALPKGQTEAA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 266 ESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 326 AWLGMSTEGYVFAAAVYWIFCFSMSRYSQHLEKRFHTGR 364


>gi|227499008|ref|ZP_03929145.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904457|gb|EEH90375.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 240

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 86/232 (37%), Gaps = 1/232 (0%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F       GL +    +     + V S  LG   +LF             K L  LY+ 
Sbjct: 6   FFDPSYIVSGLVYIFPYLKVTLGLTVSSVCLGTFWALF-CAFLEIRRVPLFKELAALYVL 64

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                    L+ +       F   +  +  F              + L+ +T A++ EI 
Sbjct: 65  ICRSLPNMVLLYLVYYGLPIFVMAMDQEGVFHFPVEKVTALQVAVVGLTLHTGAYLTEIF 124

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+   AVP GQ EAA ++G+T  +A   V+ PQA+   +P   +Q+L+ +K++S+   + 
Sbjct: 125 RAAYEAVPEGQKEAAKSIGMTGLQAFFRVIFPQAVTVALPMFANQFLSTMKSTSIVFVIT 184

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L          + +  E  +    +Y  + +       ++  +     K
Sbjct: 185 VVELFGAAKLFSEDSMRYFEAYMAVAILYWLMGVGFEFIFGKMEVRSNRFRK 236


>gi|163739483|ref|ZP_02146893.1| amino acid ABC transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
 gi|161387236|gb|EDQ11595.1| amino acid ABC transporter, permease protein [Phaeobacter
           gallaeciensis BS107]
          Length = 432

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 38/330 (11%)

Query: 70  FEIDQGIVPYTSDSSYA--TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           F++ + ++ +T+   +     I  G +    +A  G + A  +    G G  +     A 
Sbjct: 131 FDLPRKLLAFTAIYPFLAFWLIWGGSILVPIVALLGFVAAGFVFQKFGKGSFALGFFGAI 190

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  V V                   +    IP+ +        + +R L    L M    
Sbjct: 191 VAAVVV-----------------WNIGGFLIPEGASDNAMLSAVPSRDLGGFMLNMMLGV 233

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                S  LGI L+L      R  +    K + +++I       L TL+ +A     +F 
Sbjct: 234 TCVSLSVPLGIALAL-----GRQSNMPLIKWICVVFIEFVRGVPLITLLFVASVMLSYFF 288

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P                F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL +
Sbjct: 289 PP----------DATVDLFLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLDY 338

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VSVGGTIINQ--TGQA 363
            +A RL++LPQA++  IP + +  + L K+++L   +   DL  +  G  + +    G  
Sbjct: 339 PQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVY 398

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            E++    F++  +   I+ +   L  ++A
Sbjct: 399 WELLGFAAFLFFIVCYGISQYSQWLERRLA 428


>gi|24378948|ref|NP_720903.1| putative amino acid ABC transporter, permease [Streptococcus mutans
           UA159]
 gi|290581034|ref|YP_003485426.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24376835|gb|AAN58209.1|AE014892_2 putative amino acid ABC transporter, permease [Streptococcus mutans
           UA159]
 gi|254997933|dbj|BAH88534.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 267

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 93/254 (36%), Gaps = 9/254 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++   +   L                      L     T+       +F  VL ++ ++
Sbjct: 4   LLLTINWYDKLVASLPNGKLFSWRAVFDAIPSILEKLPTTLILTLGGSIFGLVLALLFAI 63

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQ-FNFIGGS 260
                 +  +       P+       + G P LV + L  Y +      L Q        
Sbjct: 64  VKLNRVKILY-------PIQAFFVSFLRGTPILVQLMLTYYGIPLLLKALNQKMGTDFNI 116

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
              P  +    A +   AA+ +E +R+ + +V  G++EAA +LG+T  +  R V++P A 
Sbjct: 117 NAIPASVFAITAFAFNEAAYTSETIRAAIQSVNSGEIEAAKSLGMTTAQVYRRVIIPNAA 176

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
               P L +  + L K +SLA   G  ++ +    +     +  E  +    IY  +SI+
Sbjct: 177 VVATPTLINTLIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERFISVAIIYWGVSII 236

Query: 381 IALFMNRLNAKIAL 394
           I      +  K+ +
Sbjct: 237 IEQVGRLIEKKMEI 250


>gi|300172545|ref|YP_003771710.1| glutamine ABC transporter permease [Leuconostoc gasicomitatum LMG
           18811]
 gi|299886923|emb|CBL90891.1| glutamine ABC transporter permease component [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 213

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+ ++    + S +LG   ++      +   +K  + +  +Y+  F    L
Sbjct: 9   PTFLQGFGYTLLSSIIALIGSMILGTGFAIM-----QIVPQKWAQVIGNVYVQVFRNIPL 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +                  F  +        F S  +AL  YT+AFIAE VR+G+++V
Sbjct: 64  LIITFFF--------------FLVVSKYVKMSGFTSGTVALMLYTSAFIAETVRAGILSV 109

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQME A A GL+  +A + ++LPQA R  +P L +Q++NL+KNSS+   VG  DL+  
Sbjct: 110 NGGQMEGARANGLSFAQAMQYIILPQAFRIALPSLGNQFINLVKNSSILAFVGGLDLMYQ 169

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +   T       +I    YL L++ ++ ++  L  K+  
Sbjct: 170 GNMVAANTFDTFSTYIIVAIFYLILTLPLSYYIQHLERKLKR 211



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L GF  T   +   +I + I+GT     ++   K    I  VYV+VFRNIP L++ FF 
Sbjct: 11  FLQGFGYTLLSSIIALIGSMILGTGFAIMQIVPQKWAQVIGNVYVQVFRNIPLLIITFFF 70

Query: 149 YKSVLSVLPI 158
           +  V   + +
Sbjct: 71  FLVVSKYVKM 80


>gi|296532449|ref|ZP_06895173.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296267224|gb|EFH13125.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 222

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 13/232 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            I   F   +  R        +     + V S  +G VL L A   +R        A   
Sbjct: 1   MIDYHFDWSVITRNADRFAEALALGLGLAVLSLAIGCVLGL-ACAYARQSGRIWLSAPVR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+   ++   P L+LI   Y   F  P         G     +F S  + LS Y  A++
Sbjct: 60  VYVE--IVRCTPLLLLIFFIY---FGLPEF-------GIYGMDKFQSFVLTLSLYAGAYM 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+ R+GL ++P+  +EAA A+G+   +    V+LP   R  +P +++  ++L K++SLA
Sbjct: 108 SEVFRAGLASIPKQYVEAAKAIGMRPWQRQVYVVLPVMFRITLPSISNNLISLFKDTSLA 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A+   +L  V   +   T + +E+ L    +YL+ + ++A  + R+  + A
Sbjct: 168 AAIAIPELTFVARQVNANTFRVMEVWLTASALYLATAWLLAALLRRVERRYA 219


>gi|271502695|ref|YP_003335721.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270346250|gb|ACZ79015.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 248

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG------KALPLLYIST 226
                   +T+   A   V + + G++L+      +R             +  PLL    
Sbjct: 22  QWLWQGFQVTLGIAAATVVLATLSGLILAAGRDSGTRWLRWPVIAYCALFRNTPLLVQLF 81

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F  FG   L+       L+           +G    S EF++    L+ Y+AAFIAE VR
Sbjct: 82  FWYFGAAQLLPEGAMQWLNRP----HVIPLVGLDMPSFEFLAGLFGLTLYSAAFIAEEVR 137

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+  V RGQ  AA ALGLT  +A R V+LPQA+R  +PPL  QY+N++KNSSLA+A+G 
Sbjct: 138 AGIAGVARGQKYAACALGLTGWQAMRYVVLPQALRIALPPLLGQYMNVVKNSSLAMAIGV 197

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A+L      +  +T +  +   +   +Y+++  ++  +      +  ++
Sbjct: 198 AELSYASRQVETETLRTFQAFGVATVLYIAVIAVMEGWGQWRQHRQPVR 246



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 40/93 (43%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
              Q +        Y   +  GF  T  +A + ++ AT+ G ++ AGR S  + + W   
Sbjct: 6   SFQQWLADTLLAPQYLQWLWQGFQVTLGIAAATVVLATLSGLILAAGRDSGTRWLRWPVI 65

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            Y  +FRN P LV +FF Y     +LP      
Sbjct: 66  AYCALFRNTPLLVQLFFWYFGAAQLLPEGAMQW 98


>gi|259906953|ref|YP_002647309.1| transport system permease protein [Erwinia pyrifoliae Ep1/96]
 gi|224962575|emb|CAX54030.1| transport system permease protein [Erwinia pyrifoliae Ep1/96]
 gi|283476747|emb|CAY72582.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 366

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G ++  G+ P+        A+++G ++         I   ++ +L   G   
Sbjct: 76  WVFIHARFG-QLMYGLYPHELRWRINLALVIGLLS---------IVPMLVKSLPRRGS-- 123

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  + PL+V   +Y   L +  +                     T
Sbjct: 124 -----------YLVGWAVVYPLLVWLLMYGGWLGLEQVETRQ-------------WGGLT 159

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +   GI+L+L      R       + L +L+I  +    L T++ ++ 
Sbjct: 160 LTLIIAAVGIAGALPAGILLAL-----GRRSRMPVVRTLCVLFIEFWRGVPLITVLFMS- 213

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   +   + +   + +  + +A++AE+VR GL A+P+GQ E A
Sbjct: 214 ---------SVMLPLFMAEGSSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEGA 264

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 265 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 324

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 325 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFHTGR 363


>gi|239629874|ref|ZP_04672905.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239527486|gb|EEQ66487.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 220

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 19/221 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T++ +     FSF+LG++L L      ++F    G          F+I  +
Sbjct: 14  RYLLQGLGVTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVG----------FVIDLI 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + +  +F  P +                +  IA+S + +A +AEIVRSG+ AV
Sbjct: 64  RNLPLLLILFFTYFALPDI--------GIRLNVVAAAIIAMSIFESAMLAEIVRSGINAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQMEAA + GLT  +A R +++PQA++ +IPP+ SQ+++L+K++SLA  +   +    
Sbjct: 116 PRGQMEAARSNGLTFYQAMRYIIMPQALKKMIPPIVSQFISLVKDTSLATIILLPEATYH 175

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I  Q     I + +    +Y  ++  ++L    L+ ++
Sbjct: 176 AQIIYGQNINYMIPMFVALAVMYFVVNYALSLASRWLDRRL 216



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 35/77 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +  + I+G ++G  R    K  + I    +++ RN+P 
Sbjct: 9   SWINLRYLLQGLGVTLEVSIVSIFFSFILGVILGLARYVKIKYFSAIVGFVIDLIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPI 158
           L+++FF Y ++  +   
Sbjct: 69  LLILFFTYFALPDIGIR 85


>gi|209695419|ref|YP_002263348.1| arginine/ornithine periplasmic binding protein-dependent
           transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
 gi|208009371|emb|CAQ79644.1| arginine/ornithine periplasmic binding protein-dependent
           transporter, inner membrane component [Aliivibrio
           salmonicida LFI1238]
          Length = 246

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 97/233 (41%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ + S +L + L      L++    +  +++  +Y  T ++ G+P LVL+ L +  
Sbjct: 17  VTLQVALLSLILAVFLG-MLGALAKLAPYRWARSIATVY--TTVVRGIPDLVLMMLLFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                              +    P      ++        F++  + +     A++AE 
Sbjct: 74  GQMLLNNGLYESNEWINEWMTSSDPNHEWVAYLPDYIEISPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV RG+MEAA A G++   A R +L PQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDRGEMEAAKAYGMSGPMAFRRILFPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V V       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLEDMVRVSSMAAGTTKMPFTFYMTVACIFLLFTAVSTGALKLVERKFSIHTR 246



 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y ++IL G + T  +A   +I A  +G L    +L+  +    I  VY  V R IP LV+
Sbjct: 7   YESSILDGALVTLQVALLSLILAVFLGMLGALAKLAPYRWARSIATVYTTVVRGIPDLVL 66

Query: 145 IFFLYK--------SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  L+          +       +  +            L          A +    F+ 
Sbjct: 67  MMLLFFGGQMLLNNGLYESNEWINEWMTSSDPNHEWVAYLPDYIEISPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|300856061|ref|YP_003781045.1| putative amino acid ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300436176|gb|ADK15943.1| predicted ABC-type aminoacid transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 221

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 105/231 (45%), Gaps = 15/231 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + +   +    L    +T++       FS +LG V++ F     R+++    K L  
Sbjct: 2   DFNIEYFFSMFPVILRGLPITVEVAGASLFFSVILGFVIAAF-----RYYNIPMLKQLST 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +++S F     P +  + + Y        L            P F +  I LS   AA++
Sbjct: 57  VFVSFF--RSTPFIAQLFVFYYGIAQVSKL--------VKNMPSFWATIIVLSLSFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  + +V +GQ EA I++GL+  +    +++PQA+R  IP + + + NL K++SL 
Sbjct: 107 SEDIRGAITSVDKGQFEAGISIGLSSWQTVYRIIIPQAVRVAIPGMMNSFANLFKSTSLC 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             VG  D+++      N + + +E  +  + IY  +   I+   +RL   +
Sbjct: 167 FIVGLKDMIAYCKNEANVSFRYLEGYMAVLIIYWIILSSISYLQSRLERHM 217



 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 40/104 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G   T  +A + +  + I+G ++ A R     ++  +  V+V  FR+ P +  +F 
Sbjct: 14  VILRGLPITVEVAGASLFFSVILGFVIAAFRYYNIPMLKQLSTVFVSFFRSTPFIAQLFV 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
            Y  +  V  +  +       + + +   +         A   V
Sbjct: 74  FYYGIAQVSKLVKNMPSFWATIIVLSLSFAAYMSEDIRGAITSV 117


>gi|317053432|ref|YP_004119199.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953171|gb|ADU72643.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 243

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 107/222 (48%), Gaps = 4/222 (1%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +       + +   A   V +F + ++L   A  L R+   +    +   ++  F    +
Sbjct: 19  HSWWETLVMGLGWTAATAVGAFAIALLLGSLAGVL-RNLPSRGLNGMGSAFVEVF--RNI 75

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + L Y +  +       +++     + +F +  + L CY  A +AE+VR+GL ++
Sbjct: 76  PLLMQMFLWYFVLPEALPRAAGDWLKQLP-NAQFYTAVLCLGCYHGARMAEVVRAGLESL 134

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ  A  ALGLT  +  R VLLP A R + P +TS++L+  KN+S+A+A+G  +L   
Sbjct: 135 SKGQRMAGQALGLTLPQTYRYVLLPVAYRIVTPAITSEFLSCTKNTSVALAIGLIELTGS 194

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +   T Q  E   +   +YL L++ I   M  +  + AL
Sbjct: 195 ARAMQENTFQVFEAFSVATVLYLLLNMAIVFAMRGIEKRAAL 236



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 37/84 (44%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               S+   +++G   T   A      A ++G+L G  R   ++ +  +   +VEVFRNI
Sbjct: 16  DGAHSWWETLVMGLGWTAATAVGAFAIALLLGSLAGVLRNLPSRGLNGMGSAFVEVFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSI 163
           P L+ +F  Y  +   LP      
Sbjct: 76  PLLMQMFLWYFVLPEALPRAAGDW 99


>gi|325122856|gb|ADY82379.1| histidine transport system permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 237

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 87/220 (39%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G VL++    L+R       +    LY  T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFVLAVPL-SLARVSENPWLRGPVWLY--TYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + Q   +  +          +A +  T A+  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYIHQHQTLD-AFFREGINCTILAFALNTGAYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKRYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFNAFGIAAVLYAVLAFILIGLFRKLEKR 227



 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 30/79 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL    +    ++   +   R+S N  +     +Y  VFR  P  + +  +Y
Sbjct: 20  MTGVAMTAWLLVLSIGIGFVLAVPLSLARVSENPWLRGPVWLYTYVFRGTPLYIQLLIIY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + S   I  H  +  F 
Sbjct: 80  SGIYSFDYIHQHQTLDAFF 98


>gi|319795335|ref|YP_004156975.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315597798|gb|ADU38864.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 231

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 21/206 (10%)

Query: 196 LGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           + +V++L         R     + ++ + +PLL    F  FG P L+   +K  L+    
Sbjct: 39  IALVVALLRLSPIAPLRWLGFAYVESIRNIPLLAHMLFWYFGAPELLPDGIKQWLYAG-- 96

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                          E  S  +AL+ YTAAF+AE +RSG+ A+P  Q EA  ALG     
Sbjct: 97  -------------HIEAYSAIVALALYTAAFMAEDIRSGIRAIPTVQFEAGRALGFGFLD 143

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA+R  +PPL SQ L+L KN+S+A  +G A+L+   G + + T ++ E    
Sbjct: 144 TMRRVVLPQALRITVPPLISQTLSLWKNTSIATVIGVAELMYQAGQVESATFRSFESFAF 203

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               YL++S+ I       + +  ++
Sbjct: 204 ASAAYLTVSLAITGLATWYHHRFPVR 229



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 35/86 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ G V +  L  + ++ A  I  +V   RLS    + W+   YVE  RNIP 
Sbjct: 11  TGKYHDMLVAGLVLSLQLLAASLMLALPIALVVALLRLSPIAPLRWLGFAYVESIRNIPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L  + F Y     +LP      +   
Sbjct: 71  LAHMLFWYFGAPELLPDGIKQWLYAG 96


>gi|300172941|ref|YP_003772107.1| polar amino acid ABC transporter permease [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299887320|emb|CBL91288.1| Polar amino acid ABC transporter, permease protein [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 213

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 19/230 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + L    LS   +T+       + S  LGI++SL            T + L   YI
Sbjct: 1   MNYFLELLPSLLSGLKMTLGVFFFTIIGSIPLGIIVSLGM-----KSEYFTIRWLINGYI 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y                     P F +  IA     AA++AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYY-----------GLGMMGISFPRFEAAIIAFIINYAAYLAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL +VPRGQ +AA  LG T  +    ++LPQ ++ ++P   ++ +NL+K++SL   +
Sbjct: 103 FRGGLQSVPRGQYDAAKVLGFTKIQTFFKIVLPQVIKIVVPSFGNEVINLVKDTSLVYVI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D++  G    ++    I   L+   IYL ++ ++ + + R   ++ +
Sbjct: 163 GLGDILRAGNIAASRDVTLIP-YLLVGLIYLIMTAIVTVLLRRTEKRLNI 211



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  +I +  +G +V  G  S    + W+   Y+ + R  P L+ + F+
Sbjct: 11  LLSGLKMTLGVFFFTIIGSIPLGIIVSLGMKSEYFTIRWLINGYIWIMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +               +N 
Sbjct: 71  YYGLGMMGISFPRFEAAIIAFIINY 95


>gi|86135805|ref|ZP_01054384.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseobacter sp. MED193]
 gi|85826679|gb|EAQ46875.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseobacter sp. MED193]
          Length = 432

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 71/335 (21%), Positives = 142/335 (42%), Gaps = 40/335 (11%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTL---VGAGRLSANKLVA 126
           F++ + ++ +T    +  A  + +  T  +    +I   +   +   +G G  +A    A
Sbjct: 131 FDLPRKLLAFTVIYPFL-AFWLIWGGTIMVPIVALIGFAVAAVVFQKLGKGSFAAGFFGA 189

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
            +  + +  ++    L+       ++LS +P                R L    L M   
Sbjct: 190 IVAALVI--WKVGGMLIPEGASESAMLSSVPS---------------RDLGGFMLNMMLG 232

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 S  LGI L+L      R       K + +++I       L TL+ +A     +F
Sbjct: 233 VTCVSLSVPLGIALAL-----GRQSSMPLIKWICVVFIEFVRGVPLITLLFVASVMLSYF 287

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P                F+ + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL 
Sbjct: 288 FPP----------DATVDLFLRVVIMITLFSAAYIAEVIRGGLAALPKGQYEAADSLGLD 337

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VSVGGTIINQ--TGQ 362
           + +A RL++LPQA++  IP + +  + L K+++L   +   D+  +  G  + +    G 
Sbjct: 338 YPQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDMVGMIRGPILASTEWNGV 397

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             E++     ++  +   I+ +   L  ++A   +
Sbjct: 398 YWELLGFAAALFFVVCYGISQYSQWLERRLATGHR 432


>gi|46908518|ref|YP_014907.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b F2365]
 gi|47092446|ref|ZP_00230236.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|254825077|ref|ZP_05230078.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254994370|ref|ZP_05276560.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J2-064]
 gi|300763904|ref|ZP_07073900.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|46881790|gb|AAT05084.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019223|gb|EAL09966.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|293594320|gb|EFG02081.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300515245|gb|EFK42296.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|328465383|gb|EGF36630.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 1816]
 gi|328471567|gb|EGF42447.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 220]
          Length = 238

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +       L  +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLL-SLPRIYKIPVLDQLARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSIVGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL+ R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKWIEKRVKKENTR 229



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 35/75 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G L+   R+    ++  + RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVLLSLPRIYKIPVLDQLARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             I    +     ++
Sbjct: 84  SSIVGIDLSQMDPLY 98


>gi|254464809|ref|ZP_05078220.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
 gi|206685717|gb|EDZ46199.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
          Length = 366

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 24/270 (8%)

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y +  R I  +V    L          P  ++++  G F            +  +  + +
Sbjct: 118 YADRIRGIALIVAWALL----------PVFALIMIGGAFGMQEVDQSLWGGLMLSVLLAL 167

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
              ++ I L +    L RH+     KA+ + +I       L T++ +A      F  P L
Sbjct: 168 VGVIVSIPLGVLL-ALGRHYGSPAVKAICVAFIELVRGVPLITILFMASVMMPLFLPPDL 226

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              N           + + I +  +++A++AE+VR GL A+P+GQ EA++ALG++  +  
Sbjct: 227 VINN----------LLRIQIGMILFSSAYMAEVVRGGLQAIPKGQTEASLALGVSPARTI 276

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIIL 368
             V++PQA+R ++PPL  + + L K++SL + VG  D + +           G   E  +
Sbjct: 277 IFVVVPQALRHVLPPLIGRCIALFKDTSLVIIVGLLDFLGMVRGAALDPEWLGFQAEAYV 336

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              F+Y  +   ++L+   L  +     K+
Sbjct: 337 FAAFVYWLICYSLSLYGRALERRGPAGSKR 366


>gi|152983662|ref|YP_001349725.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Pseudomonas
           aeruginosa PA7]
 gi|150958820|gb|ABR80845.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Pseudomonas aeruginosa PA7]
          Length = 218

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 18/233 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   +  + L     T+      F  + V G++ ++   R SRHF         L
Sbjct: 3   FFDWQFAWQILPQLLHASLKTVGITLVGFTLAMVFGLLFAMA--RRSRHFW--------L 52

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +   +LI  + +  L+   Y L +  P                 ++  + ++ + A + 
Sbjct: 53  SWPVAWLIEFIRSTPLLIQVYFLFYVLPSY--------GLSMTSLVAGTLGIALHYACYT 104

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+GL +VPRGQ EA  AL  +  +A R V+LPQA+R ++P L +  + + K++ + 
Sbjct: 105 AEVYRAGLDSVPRGQWEAVTALNFSPWRAYRQVILPQAIRPVLPALGNYLIAMFKDTPVL 164

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            A+   +++     + + + + +E I +    +L +SI +A  + ++  + AL
Sbjct: 165 SAITVVEIMQQAKNVGSDSFRYLEPITLVGVFFLLISIGLASVVRQVEKRTAL 217



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 36/98 (36%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
              +         +L   + T  +   G   A + G L    R S +  ++W     +E 
Sbjct: 3   FFDWQFAWQILPQLLHASLKTVGITLVGFTLAMVFGLLFAMARRSRHFWLSWPVAWLIEF 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            R+ P L+ ++FL+  + S        +    G+ L+ 
Sbjct: 63  IRSTPLLIQVYFLFYVLPSYGLSMTSLVAGTLGIALHY 100


>gi|25028403|ref|NP_738457.1| glutamate transporter permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|259507460|ref|ZP_05750360.1| glutamate transport system permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|23493688|dbj|BAC18657.1| glutamate transporter permease protein GluD [Corynebacterium
           efficiens YS-314]
 gi|259164948|gb|EEW49502.1| glutamate transport system permease protein GluD [Corynebacterium
           efficiens YS-314]
          Length = 316

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 15/260 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +   V+ +       +     D               L     T+       + + ++G 
Sbjct: 32  VAVAVLFWVGSVLQENGQLDGDKWTPFLDPQTWTTYLLPGLWGTLKAAVASILLALIMGT 91

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L L      R    +  +    + I TF    +P L+L+   YQL     ++       
Sbjct: 92  LLGL-----GRISEIRLLRWFCGIIIETF--RAIPVLILMIFAYQLFARYQLVP------ 138

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             +    F ++   L+ Y  + IAEI+RSG+ ++P+GQ EAAIALG++ R+ T  +LLPQ
Sbjct: 139 --SRQLAFAAVVFGLTMYNGSVIAEILRSGIASLPKGQREAAIALGMSTRQTTWSILLPQ 196

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ +++P L +Q +  LK+S+L   +G+ ++V  G    +     +  + +   I + ++
Sbjct: 197 AVAAMLPALIAQMVIALKDSALGYQIGYIEVVRSGIQSASVNRNYLAALAVVAVIMILIN 256

Query: 379 IMIALFMNRLNAKIALKEKK 398
             +     R+  ++     +
Sbjct: 257 FALTALAERIQRQLRAGRAR 276



 Score = 80.8 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R  N  + I   L+   +  W  + +  N +                
Sbjct: 6   RATVLYDAPGPRGRRSNTIITIATTLVAVAVLFWVGSVLQENGQLDG------------- 52

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
                   P+    ++ T +L G   T   A + ++ A I+GTL+G GR+S  +L+ W C
Sbjct: 53  ----DKWTPFLDPQTWTTYLLPGLWGTLKAAVASILLALIMGTLLGLGRISEIRLLRWFC 108

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            + +E FR IP L+++ F Y+       +P   +     +F
Sbjct: 109 GIIIETFRAIPVLILMIFAYQLFARYQLVPSRQLAFAAVVF 149


>gi|300718316|ref|YP_003743119.1| polar amino acid ABC transporter, permease protein [Erwinia
           billingiae Eb661]
 gi|299064152|emb|CAX61272.1| polar amino acid ABC transporter, permease protein [Erwinia
           billingiae Eb661]
          Length = 231

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 105/223 (47%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+     M  +  +      LG  L   A  L       T K L +  +S ++ +     
Sbjct: 9   LTGQFGQMIVDGTLVTLKLALGSWLLAMALALLLVVIRLTNKRLAVFLVSAYVSYHRNVP 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            LI L         +L +   +  +  + EF+    AL    AA+ +E +RSGL A+P G
Sbjct: 69  TLIQLMMWYFAIPTLLPESVQMWVNDFNAEFLFSMCALGLCQAAYFSEDIRSGLRAIPDG 128

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+ ALG+++ ++ R V+LPQA+R+ +P L +  + L KN+SLA+ +G A+L  V   
Sbjct: 129 QNEASRALGMSYVRSMRSVILPQAIRNALPSLLNHTVLLFKNTSLAMVIGVAELTYVTRD 188

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I NQT +  E  L+    YL  S+++      L  +      +
Sbjct: 189 IENQTFRTFEAYLVASVGYLFFSLLLMAAGALLARRFQRAYAR 231



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 38/86 (44%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   I+ G + T  LA    + A  +  L+   RL+  +L  ++   YV   RN+P 
Sbjct: 10  TGQFGQMIVDGTLVTLKLALGSWLLAMALALLLVVIRLTNKRLAVFLVSAYVSYHRNVPT 69

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L+ +   Y ++ ++LP      V  F
Sbjct: 70  LIQLMMWYFAIPTLLPESVQMWVNDF 95


>gi|222823608|ref|YP_002575182.1| amino acid ABC transporter permease [Campylobacter lari RM2100]
 gi|222538830|gb|ACM63931.1| amino acid ABC transporter, permease protein [Campylobacter lari
           RM2100]
          Length = 250

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 114/250 (45%), Gaps = 17/250 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++F+ Y S    +        L  G +           +      + V   ++GIVL  
Sbjct: 14  IIVFWAYFSFPIEILQVKDQNGLATGEYAYTIEAKAYVHSYFITLGLTVGGILIGIVLGF 73

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    ++   +   YI   +I G P L+ + +             F+ +  +T 
Sbjct: 74  FLAFL-RFLEIQSLNFIIDEYID--IIRGTPILLQLLI-------------FSVVIFATW 117

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           S  F    IAL   ++A++AEIVRSG+ +V +GQMEAA A+GL +  + RL++ PQA+++
Sbjct: 118 SDNFYVAIIALGLNSSAYVAEIVRSGIQSVDKGQMEAARAMGLNYSASMRLIIFPQAIKN 177

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+P L +++++L K +S+   +   D+     ++        + I+    +Y     +  
Sbjct: 178 ILPSLMNEFISLFKETSIVGYISVMDITMQSKSLQAIYYNP-KPIIFTGLVYYVSVKIFT 236

Query: 383 LFMNRLNAKI 392
           LF   L  ++
Sbjct: 237 LFARILEERL 246



 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 34/84 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A +  +  T  L   G++   ++G  +   R    + + +I   Y+++ R  P L+ +
Sbjct: 47  AKAYVHSYFITLGLTVGGILIGIVLGFFLAFLRFLEIQSLNFIIDEYIDIIRGTPILLQL 106

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGM 169
                 + +      +  ++  G+
Sbjct: 107 LIFSVVIFATWSDNFYVAIIALGL 130


>gi|222102913|ref|YP_002539952.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221739514|gb|ACM40247.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 235

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 5/221 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N   +S     ++    I + S+VL + L++    L R      G A+   Y+S      
Sbjct: 12  NPDYVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLAL-RFSPGGIGNAIVTAYVS--YHRN 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +PTLV + L Y   F    +           + E +   I L    AA+ +E +RSGL +
Sbjct: 69  VPTLVQLVLWYFGIFTL--MPSGLSAWLVNHNAETIFAVIGLGLCQAAYFSEDLRSGLRS 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQMEAA ALG  +  A R V++PQ +R+ +PPL +  ++L KNSSLA+ VG ++L  
Sbjct: 127 ISPGQMEAARALGHGYLSAMRYVMIPQGVRNALPPLINHTVSLFKNSSLAIVVGASELTH 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               I N T +  E  LI   +YL  S++I      L  ++
Sbjct: 187 AVKEIENITFRTFESYLIGTVLYLFFSLLIMAGGAYLQWRV 227



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 37/82 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +L G   TF +A    + A  +  L+ A R S   +   I   YV   RN+P LV 
Sbjct: 15  YVSMLLHGIEMTFIIAIGSWVLAMTLAVLLLALRFSPGGIGNAIVTAYVSYHRNVPTLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLP 166
           +   Y  + +++P    + ++ 
Sbjct: 75  LVLWYFGIFTLMPSGLSAWLVN 96


>gi|254224690|ref|ZP_04918306.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125622753|gb|EAZ51071.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
          Length = 266

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
                    +P++ ++   G +     L    +T+       +F+  L        T L 
Sbjct: 35  MGYTWQWHRVPEYVLIFEDGQWWAGDLLHGLLVTLQLTGISLIFTLAL-----GLTTALL 89

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R      G+AL   YI   ++   P LV I L Y +             G       F +
Sbjct: 90  RQSRSLVGRALGTGYI--AVVRNTPLLVQIYLLYFVF------------GPVIGLDRFAT 135

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +  A+ AE+ R GL ++ +GQ EAA +LGL+       V+LPQ ++  +PPLT
Sbjct: 136 AVLALALFQGAYTAEVFRGGLNSIAQGQYEAARSLGLSRFFTFYDVILPQLLQRTLPPLT 195

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ ++L+KNSS+   +   DL + G  I+++T    EI      IYL L++ ++     L
Sbjct: 196 NEMVSLIKNSSIVSVMAIFDLTTQGRNIVSETAMPFEIWFSVAAIYLLLTLTLSALSAWL 255

Query: 389 NAKIALKEK 397
             K+  + +
Sbjct: 256 EHKLGAQWR 264



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
              +    +  +L+    +W +++    M       G  +   R    + + ++ +    
Sbjct: 7   FRPLLFAALQMMLVFAGLVWLLDSGAEAM-------GYTWQWHR----VPEYVLIFEDGQ 55

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +A  +L G + T  L    +I    +G      R S + +   +   Y+ V RN P LV
Sbjct: 56  WWAGDLLHGLLVTLQLTGISLIFTLALGLTTALLRQSRSLVGRALGTGYIAVVRNTPLLV 115

Query: 144 VIFFLYKSV 152
            I+ LY   
Sbjct: 116 QIYLLYFVF 124


>gi|15889180|ref|NP_354861.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156999|gb|AAK87646.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 276

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 7/257 (2%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV   +    L +      +++  +      R        + T   +   S +LG +LS+
Sbjct: 26  VVGIAVITLWLLLAAGLIFAMIEGWDWDKFQRYGPRYIDGLITTITLVGSSIILGAILSV 85

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGST 261
                +R    +   A    Y+  F     P L  + L Y  L   +P L   +      
Sbjct: 86  -PIAFARMSENRIIGAFAYAYVYVF--RSTPLLAQLFLIYYGLGSFRPALEAVDLWW--F 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +    ++L+  TAA+ AEI+R  + +VPRGQ E A +LG++     R V+LPQA+ 
Sbjct: 141 FREAWYCGLLSLTLNTAAYQAEILRGAIRSVPRGQHEGAASLGISKFITFRKVILPQALI 200

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             + P  ++ + ++K S++   V   DL+       ++T    +  L     YL++   +
Sbjct: 201 VALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTFDY-QAYLWAAIFYLTIVETL 259

Query: 382 ALFMNRLNAKIALKEKK 398
                 L A++    K+
Sbjct: 260 RHIWAWLEARLTRHLKR 276



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 1/104 (0%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + +G   +     Y    + G + T  L  S +I   I+   +   R+S N+++    
Sbjct: 44  FAMIEGW-DWDKFQRYGPRYIDGLITTITLVGSSIILGAILSVPIAFARMSENRIIGAFA 102

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
             YV VFR+ P L  +F +Y  + S  P  +   +  F      
Sbjct: 103 YAYVYVFRSTPLLAQLFLIYYGLGSFRPALEAVDLWWFFREAWY 146


>gi|187478451|ref|YP_786475.1| glutamine ABC transporter permease [Bordetella avium 197N]
 gi|115423037|emb|CAJ49568.1| glutamine ABC transporter, permease protein [Bordetella avium 197N]
          Length = 219

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    L           KI  +  V G +L   A  ++R +  +    +  +Y+
Sbjct: 1   VNFDVAVIWDALPNLLEGTIMTVKITFWGLVGGFILGALAG-VARAYGPRAVAIIAQIYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P++     I G  V  E  +  + L   + A+IAEI
Sbjct: 60  --AIIRGTPIVVQVMFIY---FALPLM-----IPGMRVEAE-SAAIVTLMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L++V RG  EA  A+GL   K    ++ P A R +IP L +Q +  LK+SSL + +
Sbjct: 109 VRGSLLSVARGLKEAGQAMGLPFWKILCHIIGPVAFRRMIPSLGNQCIISLKDSSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  I+    +A+EI      +YL L+ ++AL +  L  ++ +
Sbjct: 169 GVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGLMALGLRLLEKRMRI 218



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 38/72 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F G++   I+G L G  R    + VA I ++YV + R  P +V + F+
Sbjct: 15  LLEGTIMTVKITFWGLVGGFILGALAGVARAYGPRAVAIIAQIYVAIIRGTPIVVQVMFI 74

Query: 149 YKSVLSVLPIPD 160
           Y ++  ++P   
Sbjct: 75  YFALPLMIPGMR 86


>gi|83942406|ref|ZP_00954867.1| amino acid ABC transproter, permease protein [Sulfitobacter sp.
           EE-36]
 gi|83953626|ref|ZP_00962347.1| amino acid ABC transproter, permease protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83841571|gb|EAP80740.1| amino acid ABC transproter, permease protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83846499|gb|EAP84375.1| amino acid ABC transproter, permease protein [Sulfitobacter sp.
           EE-36]
          Length = 224

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 11/228 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L      +     +     V  +VL+     + R F          L+IS F   
Sbjct: 8   YMWGLLPVLLGYVPLTLFMAFVGMVCALVLASVL-AVERVFRVPVLDVFVRLFISFF--R 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + L Y   +  P +  F             +  + L+ + +A++AE +R+ ++
Sbjct: 65  GTPLLVQLFLFY---YGLPQVLSF-----LGKIDGVTATIMGLTLHFSAYMAESIRAAIL 116

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V R Q EAA A+G+T  +  R ++LPQA R   P L + +++++K +SLA  +G  +L+
Sbjct: 117 GVDRSQWEAAQAVGMTQGQMMRQIILPQASRVAAPTLVNYFIDMIKGTSLAFTLGVTELM 176

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    +    E  L+   IY  +   +A     L   +     +
Sbjct: 177 GATQKEAAGSFLYFEAFLVVAAIYWVMVETLAFAQRHLEVYLNKAHAR 224



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 82  DSSYATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D  Y   +L   +     T ++AF GM+ A ++ +++   R+    ++    R+++  FR
Sbjct: 5   DFEYMWGLLPVLLGYVPLTLFMAFVGMVCALVLASVLAVERVFRVPVLDVFVRLFISFFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
             P LV +F  Y  +  V
Sbjct: 65  GTPLLVQLFLFYYGLPQV 82


>gi|148549628|ref|YP_001269730.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148513686|gb|ABQ80546.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 365

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+   +  +  + ++    +     GL     +      + +    +GIV 
Sbjct: 112 PLFIKRFPRKAFYGLGFLVLYPVLAYTLLHGGYLGLESVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R       K + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSRMPAVKVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMSFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSRMPAVKVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPI 158
           +   LP 
Sbjct: 217 LPLFLPE 223


>gi|52144669|ref|YP_082159.1| glutamine ABC transporter permease [Bacillus cereus E33L]
 gi|51978138|gb|AAU19688.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus E33L]
          Length = 214

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|26988034|ref|NP_743459.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982754|gb|AAN66923.1|AE016320_11 general amino acid ABC transporter, permease protein [Pseudomonas
           putida KT2440]
 gi|313500472|gb|ADR61838.1| AapM [Pseudomonas putida BIRD-1]
          Length = 365

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+   +  +  + ++    +     GL     +      + +    +GIV 
Sbjct: 112 PLFIKRFPRKAFYGLGFLVLYPVLAYTLLHGGYLGLESVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R       K + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSRMPAVKVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMSFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 229 -------KLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSRMPAVKVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPI 158
           +   LP 
Sbjct: 217 LPLFLPE 223


>gi|296162981|ref|ZP_06845758.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295886775|gb|EFG66616.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 246

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 8/222 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS   +T+  +   +V + ++G +  +      R    K    +  LY++ F    +P
Sbjct: 25  WLLSGFWVTITVSLSAWVIALIVGSLFGVL-----RTVPNKWASGIGTLYVAIF--RNIP 77

Query: 234 TLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V   + Y  +    PV     F      +  F S  I L  +TAA + E VRSG+ A+
Sbjct: 78  LIVQFFIWYLVIPELLPVSVGNWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINAL 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS++A  +G  DL + 
Sbjct: 138 PRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQ 197

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +++ T Q  E  +     Y+ +++++   M  + AK  L
Sbjct: 198 ARQLVDYTSQTYESFIAVTVAYMLINLVVMQLMRWVEAKTRL 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 46/94 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L GF  T  ++ S  + A I+G+L G  R   NK  + I 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            +YV +FRNIP +V  F  Y  +  +LP+   + 
Sbjct: 67  TLYVAIFRNIPLIVQFFIWYLVIPELLPVSVGNW 100


>gi|228957063|ref|ZP_04118837.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228802623|gb|EEM49466.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pakistani str. T13001]
          Length = 214

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGIL-------RYTKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|196047128|ref|ZP_03114345.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|229182976|ref|ZP_04310208.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BGSC 6E1]
 gi|196021998|gb|EDX60688.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB108]
 gi|228600433|gb|EEK58021.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BGSC 6E1]
          Length = 214

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVVGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG++VG  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVVGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|119961621|ref|YP_948805.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119948480|gb|ABM07391.1| putative amino acid ABC transporter, permease protein [Arthrobacter
           aurescens TC1]
          Length = 263

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 19/263 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L V   ++   ++ + I      +   +F   +             K  +    LG V+ 
Sbjct: 13  LYVQAGIFVVAVAAVIIAVDWKTVGTSVFNFAKIGPMFPDIFLVGLKNTLIYTFLGFVVG 72

Query: 202 LFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           L    L    +       + L   YI  F       LV IA  Y +     +    N I 
Sbjct: 73  LSGGLLLALMKLSSFPLYRWLATGYIEFFR-GVPALLVFIAFGYGVPLAFGIQWDVNII- 130

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                     + ++L    AA+IAE +R+GL AVP+GQMEAA +LG+ H +A   +++PQ
Sbjct: 131 ----------VMVSLGMVAAAYIAETLRAGLQAVPKGQMEAARSLGMPHWRAMVSIVIPQ 180

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIY 374
           A + ++PPLT++ + L K+SSL   +G      +L   G   I+  G  +  +L+    Y
Sbjct: 181 AFKIVLPPLTNEIILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFY 240

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L ++I ++L   +  ++ A  ++
Sbjct: 241 LVITIPLSLLARKFESRSARTKR 263



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 32/79 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            LVG  NT    F G +     G L+   +LS+  L  W+   Y+E FR +P L+V    
Sbjct: 54  FLVGLKNTLIYTFLGFVVGLSGGLLLALMKLSSFPLYRWLATGYIEFFRGVPALLVFIAF 113

Query: 149 YKSVLSVLPIPDHSIVLPF 167
              V     I     ++  
Sbjct: 114 GYGVPLAFGIQWDVNIIVM 132


>gi|187925333|ref|YP_001896975.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187716527|gb|ACD17751.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 225

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 6/219 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           KI + + V GIV       + R    K  +     Y++ F       L
Sbjct: 13  LPTLWTGAIVTFKITLIAIVFGIVWGTIL-AMMRLSSFKPFEWFAKGYVTIFRSIP---L 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P + Q        +     S  +A S + AA+ +EI+R+G+ +V RG
Sbjct: 69  VMVLLWFFL--IVPQVLQNVLGLSPDIDIRLASAMVAFSLFEAAYYSEIIRAGIQSVARG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ A+ ALG+T+ ++ RL++LPQA R+++P L +Q + L +++SL   +  AD       
Sbjct: 127 QVNASFALGMTYAQSMRLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYVISLADFFRTATN 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++ G  +E++L     Y  + ++ +  +  L  K+A 
Sbjct: 187 IGDRDGTNVEMVLFAGACYFVICVVASSLVKGLQKKVAR 225



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + TF +    ++   + GT++   RLS+ K   W  + YV +FR+IP ++V+ + 
Sbjct: 16  LWTGAIVTFKITLIAIVFGIVWGTILAMMRLSSFKPFEWFAKGYVTIFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|258621394|ref|ZP_05716428.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258586782|gb|EEW11497.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
          Length = 246

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 90/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------------- 248
               L++    +  + +  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARWIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNGLSSFNEFLNQ 91

Query: 249 ------PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFTERDPNHEWVSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  IP   + +L LLK ++L   +G  D+V +G      T  
Sbjct: 152 YGMSSSMSFRRILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRIGSLAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  + ++  +
Sbjct: 212 PFTFYMAVAIIFLFFTSVSTGLLKLIERRFSIHTR 246



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A ++G L    +++  +   WI  +Y  + R IP LV+
Sbjct: 7   YEASIAKGALVTIEVALLSLLLAVVLGMLGALAKMAPYRWARWIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYK--------SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S     +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNGLSSFNEFLNQWFTERDPNHEWVSYLPDYIDVSPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|212704549|ref|ZP_03312677.1| hypothetical protein DESPIG_02609 [Desulfovibrio piger ATCC 29098]
 gi|212671948|gb|EEB32431.1| hypothetical protein DESPIG_02609 [Desulfovibrio piger ATCC 29098]
          Length = 223

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 14/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +      +  +  + V + +LG V  +    L       + +   L    T +I
Sbjct: 7   FFTQDVIPALNQGLKVSIALIVPASILGFVGGVALGCLRAFGGPWSSR---LGNWYTAII 63

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P  V + + Y   +  P +G +    G        +  ++    +AA+ +E +R  L
Sbjct: 64  RGVPLAVQLMMIY---YALPKMGIYFEPYG--------AALLSFILCSAAYHSEYIRGAL 112

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++ +GQ++AA ALG+T  +    +++PQA R  +P   ++ + L+K SSLA+ V   +L
Sbjct: 113 LSIRQGQIKAAQALGMTTFQTVFWIVIPQAARRALPGCGNEIIYLIKYSSLAMLVTCNEL 172

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +S    + + T +  E+ L     YL L  +    +  L  + ++
Sbjct: 173 MSEAKVLASDTFRNTEVFLAVGLYYLILVSLATWCLRWLEKRYSI 217


>gi|302023472|ref|ZP_07248683.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05HAS68]
          Length = 165

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 234 TLVLIALKYQL-HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V I + + + HF  P    F     +      +   I +S  + A+++E  R+G+ AV
Sbjct: 1   MIVQIMIAFAMTHFVAPT---FQLGILTVDLTRLIPGIIVISMNSGAYVSETDRAGINAV 57

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ+EAA +LG+  ++A R V++PQA+ +I+P L ++++ ++K+SSL   +G  +L + 
Sbjct: 58  PKGQLEAANSLGIRPKQAMRYVIMPQAITNILPALGNEFVTIVKDSSLLSTIGVMELWNG 117

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             T+ + +   +  ++     YL ++ ++ + +     K+
Sbjct: 118 AQTVQSTSYIPLTPLVFAESYYLIMTTVLTVIIQSYEKKL 157


>gi|300811394|ref|ZP_07091890.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|313123231|ref|YP_004033490.1| glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|300497629|gb|EFK32655.1| ABC transporter, permease protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|312279794|gb|ADQ60513.1| Glutamine ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|325684595|gb|EGD26754.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 222

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 15/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + SFV+G+ L L           +  K + +      +I  +  L
Sbjct: 17  LQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGV------IIDIIRNL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  PV+                +  IA+  + +A IAE+VRSG++AV  G
Sbjct: 71  PLLLIIFFSYFGLPVM--------GIRVDAVQASVIAMVVFESAMIAEVVRSGIMAVDPG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + G+T+ +A   V+LPQA+  +IP L SQ+++L+K++SLA  +   +L+     
Sbjct: 123 QMEGARSNGMTYMQAMTHVVLPQALTKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEI 182

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I NQ T   I + L    +Y  +   ++ F N L+ +I 
Sbjct: 183 IYNQNTNYMIPMYLAVAVMYFIICFALSSFANYLSKRIK 221



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 4/76 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----VAWICRVYVEVFR 137
                  +L GF  T  ++   +I + +IG  +G  R +        ++ +  V +++ R
Sbjct: 9   SWINLRFLLQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGVIIDIIR 68

Query: 138 NIPPLVVIFFLYKSVL 153
           N+P L++IFF Y  + 
Sbjct: 69  NLPLLLIIFFSYFGLP 84


>gi|300312809|ref|YP_003776901.1| glutamine ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075594|gb|ADJ64993.1| ABC-type glutamine transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 218

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L            I     V G ++ L A  L R +     K +   Y+
Sbjct: 1   MDFDFSVITDSLPALLEGAKVTVLITAAGLVGGTLVGLLAG-LMRAYGNTLLKGIGFGYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P +V +   Y   F  PVL                +   ++   + A+IAEI
Sbjct: 60  EF--VRGTPIVVQVMFIY---FALPVLLG-------IRVDPMTAAVTSIVVNSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR   ++VPRG  EA +ALGL   +    V+ P A+R ++P + +Q++  LK++SL + +
Sbjct: 108 VRGAFLSVPRGLREAGLALGLPVWRVLAFVIGPVAIRRMVPAMGNQFIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  I+    +A+EI +    IYL +  ++   +     ++ +
Sbjct: 168 GVGELTRQGQEIMAANFRAVEIWIAVAAIYLCMIGVMTYALRTFEKRMRI 217



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 2/194 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +  +G++  T++G L G  R   N L+  I   YVE  R  P +V + F
Sbjct: 14  ALLEGAKVTVLITAAGLVGGTLVGLLAGLMRAYGNTLLKGIGFGYVEFVRGTPIVVQVMF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y ++  +L I    +       + N G     +       +       G+ L L   R+
Sbjct: 74  IYFALPVLLGIRVDPMTAAVTSIVVNSGAYIAEIVRGAFLSVPRGLREAGLALGLPVWRV 133

Query: 208 SRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                      + +P +     +     +L ++    +L      +   NF         
Sbjct: 134 LAFVIGPVAIRRMVPAMGNQFIVSLKDTSLFIVIGVGELTRQGQEIMAANFRAVEIWIAV 193

Query: 266 FMSLYIALSCYTAA 279
                  +   T A
Sbjct: 194 AAIYLCMIGVMTYA 207


>gi|114764421|ref|ZP_01443647.1| putative transport system permease abc transporter protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114543175|gb|EAU46193.1| putative transport system permease abc transporter protein
           [Roseovarius sp. HTCC2601]
          Length = 239

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 3/209 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++    ++LGIV+ L     ++ +  +  + +  +Y  T LI  +P LVL+ L Y +  
Sbjct: 29  VELAAGGYLLGIVIGLLG-ATAKLYGGRVLRDIAEIY--TLLIRAVPELVLMLLFYYVGT 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D        F           +  + +      +  E+ R  + AVP GQ+EAA A G++
Sbjct: 86  DLLNQLMAAFGREGIDIDGLSAGILVIGLVQGGYATEVFRGAIRAVPPGQIEAAQAFGMS 145

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V LP      +P + + ++   K+++L   +GF++L  V       T +    
Sbjct: 146 PFRVLRRVTLPAMAPHALPGMANLWMIATKDTALLAVIGFSELTLVTKQAAAATREYFLF 205

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 +YL+L+++  L +  L  +    
Sbjct: 206 FFAAGLLYLALTLISNLGLRWLERRARRG 234



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L GF+ +  LA  G +   +IG L    +L   +++  I  +Y  + R +P LV+
Sbjct: 17  WGGALLAGFLRSVELAAGGYLLGIVIGLLGATAKLYGGRVLRDIAEIYTLLIRAVPELVL 76

Query: 145 IFFLYKSVL 153
           +   Y    
Sbjct: 77  MLLFYYVGT 85


>gi|83643770|ref|YP_432205.1| amino acid ABC transporter permease [Hahella chejuensis KCTC 2396]
 gi|83631813|gb|ABC27780.1| ABC-type amino acid transport system, permease component [Hahella
           chejuensis KCTC 2396]
          Length = 220

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 14/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI   S  +   L+  A  L+R F     + +  +YI  F   G   L+ +   Y 
Sbjct: 15  WITLKILCLSLPVAGALAFIAG-LTRLFAPTPLRQIARVYIEFF--RGTSALIQL---YW 68

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F  P                  +  IAL     A+ AE+VR  ++AVP+GQ EAA+AL
Sbjct: 69  IYFVLPFF--------GLSLDAMTASVIALGLNIGAYGAEVVRGSVLAVPKGQYEAAVAL 120

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
             T       ++LPQ++ ++IPP  +  + L+K +SL   +   DL     T+ + T Q 
Sbjct: 121 NFTPWSRLWRIILPQSLVNMIPPFGNLAIELMKATSLVSLITIGDLTYKAKTLADATLQV 180

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            EI  + + IY  ++ ++A     L A++     +
Sbjct: 181 GEIFGLVLLIYFVIAQVMAYLFRLLEARLGRGMDR 215



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +  A  +  + G  RL A   +  I RVY+E FR    L+ ++++
Sbjct: 10  LLEGAWITLKILCLSLPVAGALAFIAGLTRLFAPTPLRQIARVYIEFFRGTSALIQLYWI 69

Query: 149 YKSVL 153
           Y  + 
Sbjct: 70  YFVLP 74


>gi|261823782|ref|YP_003261888.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607795|gb|ACX90281.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 242

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 112/228 (49%), Gaps = 11/228 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                SFP   +   A   V S + G+  ++  T L        G    LL +       
Sbjct: 12  YLMWGSFPDGPLGGAALTLVMSLLAGVASAVLGTILGVALAMSRGVWSALLAMVLGFFRA 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A
Sbjct: 72  IPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ +A ++LGL+  +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  
Sbjct: 122 IGRGQWQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTF 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   + N++    +E+ L    +Y    + + L  NR+N +   ++K+
Sbjct: 182 LATQVNNRSMVYPMEVFLFVALVYFVFCLSLELLANRVNVRFNQQQKQ 229


>gi|227820381|ref|YP_002824352.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339380|gb|ACP23599.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 219

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 13/189 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K+ +A+   YI  F   G P L+ + + +           F         P +++
Sbjct: 42  RISKRKSLRAVAKYYIELF--QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL  ++AAF+ EI R  + A+ +GQ EA+ +LG+   +  R V+LPQAMR  + P  
Sbjct: 89  AGLALILWSAAFLGEIWRGCVEAIAKGQWEASASLGMGRLQQMRYVILPQAMRIAVAPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L   ++     L
Sbjct: 149 GFSVQVIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQIL 208

Query: 389 NAKIALKEK 397
             K+ +  +
Sbjct: 209 ERKLNVAHR 217



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 37/107 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    +   ++G ++   R+S  K +  + + Y+E+F+  P L
Sbjct: 7   WDILRNLLLATRWTILLSLVSFLGGGLVGLVLLFLRISKRKSLRAVAKYYIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F  +  +          +     + L +             A  
Sbjct: 67  MQLFIAFFGLGLFGIDVPAWLAAGLALILWSAAFLGEIWRGCVEAIA 113


>gi|220932710|ref|YP_002509618.1| polar amino acid ABC transporter, inner membrane subunit
           [Halothermothrix orenii H 168]
 gi|219994020|gb|ACL70623.1| polar amino acid ABC transporter, inner membrane subunit
           [Halothermothrix orenii H 168]
          Length = 222

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 13/186 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           + +  K    L   YI   +I G P LV + + Y                         +
Sbjct: 44  KLYGFKFISWLCTSYIE--IIRGTPLLVQLFILYY-----------GLPPYGIKLTPLTA 90

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I  S  +AA+ AE +R  + +V  GQ+ AA ++G+   +    V+LPQA+  +IP  T
Sbjct: 91  AIIGFSLNSAAYQAEYLRGSIKSVSEGQLRAAYSIGMGKWQGIFYVVLPQALIKVIPSWT 150

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ LLK +SLA  +G  ++++    + ++  +  +  L+   IYL + +      N L
Sbjct: 151 NEFIYLLKYTSLAYIIGAPEMMAQAKLLASRNYEYFKTYLVAAGIYLIVVLFFTSIFNWL 210

Query: 389 NAKIAL 394
             K ++
Sbjct: 211 EKKYSI 216



 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L    ++   I+G ++  G+L   K ++W+C  Y+E+ R  P LV +F L
Sbjct: 15  LIKGLQVTMLLTLVSIVFGFILGIILIIGKLYGFKFISWLCTSYIEIIRGTPLLVQLFIL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           Y  +               G  LN+       
Sbjct: 75  YYGLPPYGIKLTPLTAAIIGFSLNSAAYQAEY 106


>gi|113866502|ref|YP_724991.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113525278|emb|CAJ91623.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 242

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 4/235 (1%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            H  V       N   L +    +     + + S+V+ +V+      L R    K    +
Sbjct: 5   WHWAVFLEQAAQNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVL-RTVPNKWLAGI 63

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              Y+  F    +P LV + + Y +  +  + G       +  + +F++  + L  +TAA
Sbjct: 64  AATYVEIF--RNIPLLVQLFIWYFVAPEL-LPGGEAIKQMNPFAQQFLAAMLCLGTFTAA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + E VRSG+ ++ RGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS+
Sbjct: 121 RVCEQVRSGINSLARGQKNAGLAMGFTLPQTYRHVLLPMAFRVIVPPLTSEFLNIFKNSA 180

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +A  +G  +L + G  +++ T +  E  +    +Y  +++ + L M  + A+  +
Sbjct: 181 VASTIGLLELAAQGRQLVDYTARPYESFIAVTLMYALINVTVMLIMRWVEARTRV 235



 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 43/86 (50%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   ++ G   T  L  S  + A +IG+++G  R   NK +A I   YVE+FRNIP
Sbjct: 16  QNETYLDWMISGLKVTLALGLSSWVIALVIGSVLGVLRTVPNKWLAGIAATYVEIFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            LV +F  Y     +LP  +    + 
Sbjct: 76  LLVQLFIWYFVAPELLPGGEAIKQMN 101


>gi|50085184|ref|YP_046694.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter
           sp. ADP1]
 gi|49531160|emb|CAG68872.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 225

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 11/234 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  +       +        + V + + GIV+      + R  +          Y+
Sbjct: 1   MDFSLLQHPDVTHALSEGFIFTLTVTVLAMIGGIVIGTPL-AMMRLSNNVVASNFAKFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       + LI + +  +F  P + +F      T      S  I  + + AAF +EI
Sbjct: 60  DVFR-----GIPLIQVIFIFYFLLPKVFEF---QSDTYWGPLFSSVITFAIFEAAFFSEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ +V RGQ+ A  ALG T+ ++ + V+LPQA R+++P L +Q + L ++ SL   +
Sbjct: 112 VRSGIQSVSRGQVNAGYALGFTYGQSMKYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVI 171

Query: 345 GFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D +    T+ N  G        LI   +Y   S +++  + RL  KIA+  
Sbjct: 172 SAPDFLGRADTLANTYGPETKATFYLIVAVVYFCSSFLLSRLVKRLQQKIAIIR 225



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 37/77 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    MI   +IGT +   RLS N + +   + YV+VFR IP + VIF 
Sbjct: 14  ALSEGFIFTLTVTVLAMIGGIVIGTPLAMMRLSNNVVASNFAKFYVDVFRGIPLIQVIFI 73

Query: 148 LYKSVLSVLPIPDHSIV 164
            Y  +  V      +  
Sbjct: 74  FYFLLPKVFEFQSDTYW 90


>gi|229089704|ref|ZP_04220965.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-42]
 gi|228693603|gb|EEL47305.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-42]
          Length = 214

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/215 (28%), Positives = 112/215 (52%), Gaps = 19/215 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +        F +  G          F++  +  L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILG----------FIVEVIRNL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P  G    I          ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 66  PLLLIIFFTYFALPEAGLKLEI--------ITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           I  Q     I   ++   +Y  ++  +++   RL 
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLE 212



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 39/74 (52%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|170720092|ref|YP_001747780.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169758095|gb|ACA71411.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 365

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 33/294 (11%)

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           T+   ++GA  L   +       VY   F  + P++    L+   L +  +P        
Sbjct: 102 TVWLAVLGAAPLFIKRFPRK--AVYGLGFLVVYPILAYTLLHGGYLGLESVPTSQ----- 154

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
                        LT+       V +  LGI+L+L      R  +    K + + +I  +
Sbjct: 155 --------WGGLMLTLVIATVGIVGALPLGILLAL-----GRRSNMPAVKVVCVTFIEFW 201

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               L T VL      L    P    F+         + +   I +  + +A+IAE+VR 
Sbjct: 202 RGVPLIT-VLFMSSVMLPLFLPEGMSFD---------KLLRAMIGVILFQSAYIAEVVRG 251

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP + + ++ L K++SL + +G  
Sbjct: 252 GLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLF 311

Query: 348 DLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           DL++            G A E  +    ++      ++ +   L  K+    K+
Sbjct: 312 DLLNSVKQAAADPAWLGMATEGYVFAALVFWIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVKVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPI 158
           +   LP 
Sbjct: 217 LPLFLPE 223


>gi|271501779|ref|YP_003334805.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345334|gb|ACZ78099.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 218

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 11/223 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +           +       + S V     ++    L      K    + L  +   + 
Sbjct: 1   MMTFTDWDIVRNLLLAGRWTVLLSLVAFFGGAVVTLPLLLLRLTKRRWPMRLTRLYADVF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLGLFGIDVSPWTAASLALTLFTSAFLLDIWHGSV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA   LGLT  +    V+ PQAMR  I P     + ++K ++LA  +GF DL
Sbjct: 110 QALPKGQWEACRCLGLTFTQTLTRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVDL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 170 TKAGTMLNNVTYQPFKVFGLVALGYFLLCYPLSYYSRYLEKKF 212


>gi|228983843|ref|ZP_04144038.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228775892|gb|EEM24263.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 214

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 114/217 (52%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +        F +  G          F++  +  L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILG----------FIVEVIRNL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P +G    I          ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 66  PLLLIIFFTYFALPEVGLKLEI--------ITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWYIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++  V
Sbjct: 68  LLIIFFTYFALPEV 81


>gi|153010840|ref|YP_001372054.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562728|gb|ABS16225.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 240

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 2/240 (0%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                 L    F  +       +    +  + V  F+LG  + +FA   ++    +T +A
Sbjct: 1   MKQMGFLDILSFGPDGWGYVLMMGALVSVALAVLGFLLGAAIGVFA-AWAKISGGRTLRA 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +   Y +T +      LV+    +        LG++    G    P F++  +A++    
Sbjct: 60  VADGY-TTIIRGIPDLLVIYLFYFGGSAAVTALGKYFGAEGFIGFPGFLAGVLAIAISCG 118

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A   E+ R    AV +G++EAA A G+      R ++ P A+R  +P L + +   LK S
Sbjct: 119 AHHTEVFRGAFRAVSKGELEAATACGMGQMLKFRRIIAPLALRHALPGLGNVWQVSLKES 178

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L    G  +L+         TG      LI   +YL +S +    +       +   ++
Sbjct: 179 ALVSVAGVVELLRQAQIGAGSTGLPFNFFLIAGALYLLISSVSGGLLQFAERHFSRGVRR 238


>gi|146308573|ref|YP_001189038.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145576774|gb|ABP86306.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 365

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 72/295 (24%), Positives = 124/295 (42%), Gaps = 33/295 (11%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
            T+   ++GA  L   ++       Y   F  I P+V    L+  V  +  +P       
Sbjct: 101 TTLWLAIIGAAPLFVPQMPRK--AFYGLAFLVIYPVVAWCLLHGGVFGLSVVPTSQ---- 154

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                         LT+   A     +  LGI+L+L      R  +    + + + +I  
Sbjct: 155 ---------WGGLMLTLVIAAVGITGALPLGILLAL-----GRRSNMPAIRVICVTFIEF 200

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +    L T VL      L    P    F+         + M   I +  + +A+IAE+VR
Sbjct: 201 WRGVPLIT-VLFMSSVMLPLFLPEGMHFD---------KLMRALIGVILFQSAYIAEVVR 250

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL A+P+GQ EAA A+GL + +   LV+LPQA++ +IP + + +++L K++SL + +G 
Sbjct: 251 GGLQAIPKGQYEAAAAMGLGYWRMMGLVILPQALKLVIPGIVNTFISLFKDTSLVIIIGL 310

Query: 347 ADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            DL+       T     G A E  +    I+      ++ +   L  K+    K+
Sbjct: 311 FDLLNSIKQATTDPAWLGMATEGYVFAALIFWIFCFGMSRYSMHLERKLDTGHKR 365


>gi|298717122|ref|YP_003729764.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361311|gb|ADI78092.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 226

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 91/180 (50%), Gaps = 4/180 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G      Y+  F   G P L+ I + Y      P + +  F     +   +    +AL
Sbjct: 43  RVGSLFCRFYVWLF--RGTPLLIQIFMVYYGLGSLPAVRESLF--WPLLRDPYWCGLLAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
               AA+ +EI+R GL AV +  +EAA   G++  K    + LP A+R  +P  +++ ++
Sbjct: 99  ILNDAAYTSEILRGGLRAVSQQSLEAAKVSGMSSYKIFTRITLPIAIRQALPAYSNEIIS 158

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++K +SL   +   ++  +  +I++ T +A+E+ L    IYL L+++++  ++ L  +++
Sbjct: 159 MIKATSLVSTISLMEMTGIADSIVSSTFRALEVFLSAAVIYLILTMLVSKGVSMLERRLS 218


>gi|300716668|ref|YP_003741471.1| Putative ABC transporter, permease [Erwinia billingiae Eb661]
 gi|299062504|emb|CAX59621.1| Putative ABC transporter, permease [Erwinia billingiae Eb661]
          Length = 306

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 112/263 (42%), Gaps = 1/263 (0%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I  +V +F L   V SV   P     +    F +   L     T+       VFS   
Sbjct: 15  RIIGAVVALFILAGVVQSVAFNPRWEWGVFARWFFDPVILHGLGQTLLLTLLGTVFSLAF 74

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FN 255
           G VL+L     S          + L      ++  +       L   L    P     + 
Sbjct: 75  GGVLALARLSSSWLLSSLAWGYIWLFRSLPLIVVLIILYNFSYLYETLSVGVPFTSLSWG 134

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 V  +F +  I L+   AA+ AEI+R G + V  GQ EAA ALGL+  + T  ++
Sbjct: 135 HFQTINVLGQFPAAIIGLTLVQAAYSAEIIRGGFLGVDFGQHEAASALGLSAFRRTFRII 194

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R+IIP   ++ ++L K +++   +   +L      I N+  + I ++++    YL
Sbjct: 195 LPQALRAIIPTAFNEIISLAKGTAMVYVLAMPELFYTIQMIYNRNQEVIPLLMVGAAWYL 254

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ ++++  + + + +A    +
Sbjct: 255 IITTVLSVIQHNVESWLARSVTR 277


>gi|157363724|ref|YP_001470491.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157314328|gb|ABV33427.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 202

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 103/206 (50%), Gaps = 14/206 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + V    +G+++++     S+ +  +  + L   Y    ++  +P LVL+ L +      
Sbjct: 1   MTVLGLAVGLIVAV-PVSFSQIYGNRAARLLSSFYEK--ILRSIPLLVLLMLIFY----- 52

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                            F++  + L   ++A+ ++I R  +++V +GQ  AA+++G+T  
Sbjct: 53  ------GLPEIGIRLDPFLACVLGLGLRSSAYQSQIFRGAILSVGKGQTLAAMSIGMTKI 106

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  R ++ PQA+R  I P T++   +LK+SS+A A+G  +L+  G  II+ T + + I +
Sbjct: 107 QIFRYIVFPQALRFSIAPWTNELTIVLKDSSMAYALGVVELLRQGSYIISTTYEPMVIFI 166

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIAL 394
               IYL ++++    M  L  K+ +
Sbjct: 167 TCAVIYLIMTLLANRVMMFLERKLQV 192


>gi|149926672|ref|ZP_01914932.1| polar amino acid ABC transporter, inner membrane subunit
           [Limnobacter sp. MED105]
 gi|149824601|gb|EDM83817.1| polar amino acid ABC transporter, inner membrane subunit
           [Limnobacter sp. MED105]
          Length = 228

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 9/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F     +  L +    +    ++ V + + GI        L+R    K     PL  I+
Sbjct: 3   DFDFSAISTSLPYLMQGLGYTVQLTVVACLGGIFFGTLL-ALARLSSIK-----PLAMIA 56

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              +  + ++ LI + +  +F  PV+ Q    +     + P+  S YI    + AAF  E
Sbjct: 57  AGYVNLMRSIPLILVIFWFYFLVPVVLQSVMGYERPPQIGPD-RSAYITFIMFEAAFFCE 115

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++P+GQ+ AA ALGL +R     ++LPQA R+++P L +Q + L +++SL   
Sbjct: 116 IMRAGIQSIPKGQVAAAQALGLNYRLTMAKIVLPQAFRNMLPVLLTQTIILFQDTSLVYV 175

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   D +     I  +    +E+      +YL++   +++ +  L  K  +  
Sbjct: 176 LSVTDFLGAASKIAQRDSALVEMYTFVALVYLAICFSMSMLVKALQKKTQIIR 228



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 78/209 (37%), Gaps = 9/209 (4%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++ S+    ++ G   T  L     +     GTL+   RLS+ K +A I   YV + R
Sbjct: 5   DFSAISTSLPYLMQGLGYTVQLTVVACLGGIFFGTLLALARLSSIKPLAMIAAGYVNLMR 64

Query: 138 NIPPLVVIFFLYK---SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +IP ++VIF+ Y     VL  +   +    +          + F         +  + S 
Sbjct: 65  SIPLILVIFWFYFLVPVVLQSVMGYERPPQIGPDRSAYITFIMFEAAFFCEIMRAGIQSI 124

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
             G V +  A  L  ++     K   ++    F       L    + +Q      VL   
Sbjct: 125 PKGQVAA--AQALGLNYRLTMAK---IVLPQAFRNMLPVLLTQTIILFQDTSLVYVLSVT 179

Query: 255 NFIGGSTVSPEFMSLYIAL-SCYTAAFIA 282
           +F+G ++   +  S  + + +     ++A
Sbjct: 180 DFLGAASKIAQRDSALVEMYTFVALVYLA 208


>gi|83593424|ref|YP_427176.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83576338|gb|ABC22889.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 230

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 6/189 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FM 267
           R         L  LYI+           L+ L + ++F  P LGQ+       +    F 
Sbjct: 47  RLSSLPVLPHLATLYINLMRSMP-----LVLLIFWVYFMVPYLGQWILGTDRPMQVGTFT 101

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  +  + + AA+ AEI+RSG+ +V RGQ  AA ALGLT+ ++   V+LPQA R+++P L
Sbjct: 102 SSLLTFTLFEAAYFAEIMRSGIQSVSRGQTAAAQALGLTYFQSMGHVVLPQAFRAMLPVL 161

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +Q + L +++SL   +   D +     +  + G+ +E+ L    +Y ++S   +L + R
Sbjct: 162 LTQVIVLFQDTSLVYVLSITDFLGAASKVAQRDGRLVEMYLFAAVVYFAISFAASLLVKR 221

Query: 388 LNAKIALKE 396
           + A+ A+  
Sbjct: 222 IQARTAIIR 230


>gi|170703106|ref|ZP_02893925.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170131985|gb|EDT00494.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 246

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVVPELLPASVGTWIKQLPPSTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVVPELLPASVGTWI 101


>gi|330950962|gb|EGH51222.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 279

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + +V  + +     GL+    +      + +    +GIV 
Sbjct: 26  PLFISKFPRKAVYGIAFLVIYPVVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 85

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 86  ALPLGIVLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 142

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LP
Sbjct: 143 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILP 195

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 196 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 255

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 256 WIFCFGMSRYSMHLERKLDTGHKR 279



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ A  +G ++  GR S    V  +C  ++E +R +P + V+F   
Sbjct: 69  WGGLMLTLVIATVGIVGALPLGIVLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSS 128

Query: 150 KSVLSVLPI 158
             +   +P 
Sbjct: 129 VMLPLFMPE 137


>gi|332162409|ref|YP_004298986.1| histidine transport system permease protein HisM [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606494|emb|CBY27992.1| histidine ABC transporter, permease protein HisM [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666639|gb|ADZ43283.1| histidine transport system permease protein HisM [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863721|emb|CBX73822.1| histidine transport system permease protein hisM [Yersinia
           enterocolitica W22703]
          Length = 238

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +    +   +T+       V   +L I L++      R            
Sbjct: 6   HQYWQALLWSDGYRFTGMAVTLWLLITSVVMGGLLAIPLAVARVAERRWIRLPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +I T++  G P  V + + Y   +   ++   + +  +          +AL+  T A+ 
Sbjct: 60  -WIFTYIFRGTPLYVQLLVFYSGMYSLEIVRGNDLL-NAFFRSGLNCTILALTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA
Sbjct: 118 TEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ +   I   T Q      I   +YL +S  +     +   +
Sbjct: 178 FTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLFRQAEKR 227


>gi|307131247|ref|YP_003883263.1| ABC transporter permease [Dickeya dadantii 3937]
 gi|306528776|gb|ADM98706.1| ABC transporter permease protein [Dickeya dadantii 3937]
          Length = 228

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 12/184 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R  H +  +   + ++  F     P L+ +      ++  PVL    F         F 
Sbjct: 49  ARTAHRRAVRLPAMAFVELF--RNTPVLIQLI---WFYYALPVLLGIQF-------STFG 96

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +AL+ YTAA+  EI R+GL ++ +GQ E A ALG+++  A R V+LPQ ++ ++P L
Sbjct: 97  AATLALTLYTAAYSTEIFRAGLQSMEQGQWEGAKALGMSYPLALRRVILPQVLQRMLPAL 156

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T++ + L K +SLA  +   +L+  G  + + T + +EI+ +    Y  L    +    R
Sbjct: 157 TNRLIELAKVTSLASMLAVNELMYQGRLLSSDTYRPLEILTVVALFYFVLIWPGSYLAAR 216

Query: 388 LNAK 391
           L  +
Sbjct: 217 LERR 220


>gi|86144266|ref|ZP_01062598.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85837165|gb|EAQ55277.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 293

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 110/266 (41%), Gaps = 16/266 (6%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
             +   +V                +  +   + +    +    ++ V+S VL +      
Sbjct: 25  WLYYRSAVGINYQWRWEDAFTLIFIPPSQGSIPYFFQGLIATLRLSVWSMVLALSFGTLL 84

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------------- 251
             ++RH      K   L++I           + I   +  +   P+L             
Sbjct: 85  G-VARHSKIAFFKTPALIFIQLVRNIPPLVFIFIFYFFVSNQLIPLLGLESILREHNGEI 143

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q    G + +     S  I +   ++A+IAE++R+GL  +P+GQ EAA +LGL+   
Sbjct: 144 NAVQAFLFGPANLWENLASGVICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALS 203

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQ + +I PPL  Q ++L+K++S+   +   ++  VG  + N +G   EI LI
Sbjct: 204 KYRFVVGPQVLTAITPPLAGQAISLIKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLI 263

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
             F+Y +L   ++     +  + ++ 
Sbjct: 264 VGFVYFALCFALSRLFKVIEQRSSVY 289



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 12/111 (10%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           +L  ++ V   W          +S + +   +  E A       ++              
Sbjct: 14  VLLAVICVFAGWLYY-------RSAVGINYQWRWEDA-----FTLIFIPPSQGSIPYFFQ 61

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           G + T  L+   M+ A   GTL+G  R S          +++++ RNIPPL
Sbjct: 62  GLIATLRLSVWSMVLALSFGTLLGVARHSKIAFFKTPALIFIQLVRNIPPL 112


>gi|312132339|ref|YP_003999678.1| hism2 [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773877|gb|ADQ03365.1| HisM2 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 366

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 114/274 (41%), Gaps = 21/274 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +   +F  +  L+++              +            +  L    +
Sbjct: 21  IRIVNWIAGI---LFAVVLVLILMRLHNPPDGENQLSWELWKPAIEREAWTDFYLPGLWM 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+       V + V G+V  +      R       + +  + +       +  L++   +
Sbjct: 78  TIKATVVAVVGAVVFGLVFGV-----GRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTETQSLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +++   IY     +++     L A++  +
Sbjct: 240 NILQTLVMAAVIYFIACWLLSRLAEWLPARMQQR 273



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  +  V V
Sbjct: 56  ELWKPAIEREAWTDFYLPGLWMTIKATVVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|300725185|ref|YP_003714513.1| putative glutamate/aspartate ABC transporter membrane protein
           [Xenorhabdus nematophila ATCC 19061]
 gi|297631730|emb|CBJ92449.1| putative glutamate/aspartate transport protein (ABC superfamily,
           membrane) [Xenorhabdus nematophila ATCC 19061]
          Length = 245

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 18/230 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                   LT+  +A   V S +LG V++      +R    K  + L  +Y + F     
Sbjct: 17  QWLWQGFLLTLWLSACAIVSSTLLGFVIA-----AARDSQIKPLRWLVTIYTTVF--RNT 69

Query: 233 PTLVLIALKYQ-----------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           P LV +   Y            +  + P       +  +  S EF++ +I L+ Y+A F+
Sbjct: 70  PLLVQLFFWYFASGQTLPQEAMMWLNTPHEATILGLTLAWPSFEFLAGFIGLTLYSAPFV 129

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+G+  V RGQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSL 
Sbjct: 130 AEELRAGIQGVGRGQKYAAHALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIVKNSSLT 189

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +A+G A+L      +  +T +  E   +   +Y+++  ++  +      +
Sbjct: 190 MAIGVAELSYASRQVETETLKTFEAFGVATILYIAIIAVMEGWGQWCQQR 239



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 45/92 (48%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
            +Q I  +     Y   +  GF+ T WL+   ++ +T++G ++ A R S  K + W+  +
Sbjct: 2   FEQFITEHLLAPEYLQWLWQGFLLTLWLSACAIVSSTLLGFVIAAARDSQIKPLRWLVTI 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           Y  VFRN P LV +FF Y +    LP      
Sbjct: 62  YTTVFRNTPLLVQLFFWYFASGQTLPQEAMMW 93


>gi|123441655|ref|YP_001005639.1| histidine transport system permease protein HisM [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088616|emb|CAL11411.1| histidine transport system permease protein HisM [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 238

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 92/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +    +   +T+       V   +L I L++      R            
Sbjct: 6   HQYWQALLWSDGYRFTGMAVTLWLLISSVVMGGLLAIPLAVARVAERRWIRLPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +I T++  G P  V + + Y   +   ++   + +  +          +AL+  T A+ 
Sbjct: 60  -WIFTYIFRGTPLYVQLLVFYSGMYSLEIVRGNDLL-NAFFRSGLNCTILALTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA
Sbjct: 118 TEIFAGAIRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ +   I   T Q      I   +YL +S  +     +   +
Sbjct: 178 FTATVPDILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLFRQAEKR 227


>gi|307320839|ref|ZP_07600249.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306893549|gb|EFN24325.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 219

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  I + S V+G VL +    L+  +  +  + +   Y     I G P LVL+   Y +
Sbjct: 22  VSVSISLLSIVVGTVLGVIVG-LALVYGFRPVRWIVRGYTDF--IRGTPVLVLVLASYYV 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F +  +AL+ + ++ + E+VR  L ++P+GQ EAA A+G
Sbjct: 79  -----------LSTIGIDLGPFQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    VL PQA+R  +P   +    ++K S+L   +G ++L+     +I++T  ++
Sbjct: 128 LTFAQTFTYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVSELLLRTQELISRTFMSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E      F+Y  ++  I  F   +  K A+
Sbjct: 188 EFYFFAGFLYFVINYGIERFGRYVERKTAV 217



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  ++   ++  T++G +VG   +   + V WI R Y +  R  P LV++   
Sbjct: 16  LLKGLGVSVSISLLSIVVGTVLGVIVGLALVYGFRPVRWIVRGYTDFIRGTPVLVLVLAS 75

Query: 149 YKSV 152
           Y  +
Sbjct: 76  YYVL 79


>gi|317048959|ref|YP_004116607.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950576|gb|ADU70051.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 238

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 94/228 (41%), Gaps = 2/228 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LY 223
           +   +    + L +      T   I ++  ++ + +      L         + +   ++
Sbjct: 1   MIDIIHEYWKSLLWTDGYRFTGVAITLWLLIISVAIGGCLAVLLAIARVSPNRFVSTPVW 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T++  G P  V + + Y   +   V+     +  +          +A +  T A+  E
Sbjct: 61  LFTYVFRGTPLYVQLLVFYSGMYTLEVVKGSELL-NAFFRSGLNCTLLAFTLNTCAYTTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    + AVP G++EAA A G +  K  R ++LP A+R+ +P  +++ + +L +++LA  
Sbjct: 120 IFAGAIRAVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPAYSNEVILMLHSTALAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               DL+ +   I + T Q      I   +YL +S ++         +
Sbjct: 180 ATVPDLLKIARDINSATYQPFVAFGIAAVLYLIISYVLISVFRMAERR 227


>gi|254854300|ref|ZP_05243648.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|258607692|gb|EEW20300.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
          Length = 238

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +       L  +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLL-SLPRIYKIPVLDQLARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSIVGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL+  +    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSIGLSSHQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKWIEKRVKKENTR 229



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 35/75 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G L+   R+    ++  + RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVLLSLPRIYKIPVLDQLARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             I    +     ++
Sbjct: 84  SSIVGIDLSQMDPLY 98


>gi|16804386|ref|NP_465871.1| hypothetical protein lmo2348 [Listeria monocytogenes EGD-e]
 gi|47096046|ref|ZP_00233648.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224499027|ref|ZP_03667376.1| hypothetical protein LmonF1_04718 [Listeria monocytogenes Finland
           1988]
 gi|224503522|ref|ZP_03671829.1| hypothetical protein LmonFR_13617 [Listeria monocytogenes FSL
           R2-561]
 gi|254826827|ref|ZP_05231514.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|254831227|ref|ZP_05235882.1| hypothetical protein Lmon1_07712 [Listeria monocytogenes 10403S]
 gi|254901126|ref|ZP_05261050.1| hypothetical protein LmonJ_14968 [Listeria monocytogenes J0161]
 gi|254914024|ref|ZP_05264036.1| amino acid ABC transporter [Listeria monocytogenes J2818]
 gi|254938339|ref|ZP_05270036.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|255028990|ref|ZP_05300941.1| hypothetical protein LmonL_07146 [Listeria monocytogenes LO28]
 gi|284802789|ref|YP_003414654.1| hypothetical protein LM5578_2546 [Listeria monocytogenes 08-5578]
 gi|284995931|ref|YP_003417699.1| hypothetical protein LM5923_2496 [Listeria monocytogenes 08-5923]
 gi|16411836|emb|CAD00426.1| lmo2348 [Listeria monocytogenes EGD-e]
 gi|47015643|gb|EAL06574.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258599205|gb|EEW12530.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258610951|gb|EEW23559.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|284058351|gb|ADB69292.1| hypothetical protein LM5578_2546 [Listeria monocytogenes 08-5578]
 gi|284061398|gb|ADB72337.1| hypothetical protein LM5923_2496 [Listeria monocytogenes 08-5923]
 gi|293592042|gb|EFG00377.1| amino acid ABC transporter [Listeria monocytogenes J2818]
          Length = 238

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +          +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLL-SLPRIYKVPILDQFARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSVFGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL+ R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKWIEKRVKKENTR 229



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 34/75 (45%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G L+   R+    ++    RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVLLSLPRIYKVPILDQFARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             +    +     ++
Sbjct: 84  SSVFGIDLSQMDPLY 98


>gi|238797418|ref|ZP_04640917.1| Histidine transport system permease protein hisM [Yersinia
           mollaretii ATCC 43969]
 gi|238718689|gb|EEQ10506.1| Histidine transport system permease protein hisM [Yersinia
           mollaretii ATCC 43969]
          Length = 227

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 92/223 (41%), Gaps = 8/223 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++ +    +   +T+       V   +L I L++      R             +I T++
Sbjct: 2   LWSDGYRFTGMAITLWLLISSVVIGGLLAIPLAVARVAERRWIRFPV-------WIFTYI 54

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI    
Sbjct: 55  FRGTPLYVQLLVFYSGMYSLEIIRGNDLL-NAFFRSGLNCTILALTLNTCAYTTEIFAGA 113

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      D
Sbjct: 114 IRSVPHGEIEAARAYGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPD 173

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++ +   I   T Q      I   +YL +S  +     +   +
Sbjct: 174 ILKIARDINAATYQPFYAFGIAAVLYLIISFTLISLFRQAEKR 216


>gi|56478021|ref|YP_159610.1| glutamate/aspartate ABC transporter transmembrane protein
           [Aromatoleum aromaticum EbN1]
 gi|56314064|emb|CAI08709.1| putative ABC transporter protein,probable glutamate/aspartate
           transmembrane subunit [Aromatoleum aromaticum EbN1]
          Length = 226

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 11/217 (5%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+       +   ++G VL+L      R       +     Y++ F       LV + 
Sbjct: 21  RYTVQVTLMAMLGGILIGTVLALM-----RLSSIAPLQWFAAGYVNIFRSVP---LVQVI 72

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L + L     +       G         S Y   + + AA+ +EI+RSG+ +VPRGQ+ A
Sbjct: 73  LAFYLILPMVLQM---ITGQQMPIGAANSAYFTFTVFEAAYYSEIMRSGIQSVPRGQVAA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A+G T+ +  RLV+LPQA R+++P L +Q + L ++ SL  A+G  D       I  +
Sbjct: 130 GYAMGFTYGQTMRLVVLPQAFRNMLPVLLTQTIILFQDVSLVYAIGATDFFGAADKITQR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             + +E+      +Y  +   ++  +  L ++IA+  
Sbjct: 190 DLRPVEMYTTVAVVYFVICFTLSRLVKLLQSRIAIIR 226



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 35/82 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T  +    M+   +IGT++   RLS+   + W    YV +FR++P + VI
Sbjct: 13  WEFLAQGLRYTVQVTLMAMLGGILIGTVLALMRLSSIAPLQWFAAGYVNIFRSVPLVQVI 72

Query: 146 FFLYKSVLSVLPIPDHSIVLPF 167
              Y  +  VL +     +   
Sbjct: 73  LAFYLILPMVLQMITGQQMPIG 94


>gi|27382709|ref|NP_774238.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27355881|dbj|BAC52863.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 230

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 11/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                  T T+   A   +   + G  ++L      R    K    +  +Y+       +
Sbjct: 16  YLFYEGMTFTVTLTALAGLGGLIFGTAIALM-----RLSGFKVLGRIAGVYVDF-----M 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            +L L+ + +  +F  P +GQ+       +    F S  I    + AA+ +EI+R+G+ +
Sbjct: 66  RSLPLVLVIFWFYFLVPYIGQWVTGASRPISVGAFASSLITFIMFEAAYFSEIMRAGIQS 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ  AA ALGLT+ +  R V+LPQA R+++P L +Q + L +++SL   +   D + 
Sbjct: 126 ISRGQPAAANALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSIPDFLG 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +  + G+ +E+ L    +Y ++S + +  + RL A+IA+  
Sbjct: 186 AASKVAQRDGRLVEMYLFAAVVYFTISCVASFGVRRLQARIAIIR 230



 Score = 39.9 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T  L     +   I GT +   RLS  K++  I  VYV+  R++P ++VIF+ 
Sbjct: 18  FYEGMTFTVTLTALAGLGGLIFGTAIALMRLSGFKVLGRIAGVYVDFMRSLPLVLVIFWF 77

Query: 149 YKSVLSVLPI 158
           Y  V  +   
Sbjct: 78  YFLVPYIGQW 87


>gi|332088978|gb|EGI94090.1| glutamine transport system permease protein glnP domain protein
           [Shigella boydii 5216-82]
          Length = 140

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 78/130 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++
Sbjct: 10  PFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRML 69

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL ++++++  
Sbjct: 70  PPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFI 129

Query: 385 MNRLNAKIAL 394
           + RL  ++ +
Sbjct: 130 LRRLERRMKI 139


>gi|325271440|ref|ZP_08137965.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324103422|gb|EGC00744.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 229

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWLAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     +     ++P  ++    L     A+++E  R   + +P+GQ EA +
Sbjct: 71  GGQDIINRVAPLLGYEDYIDLNP-LIAGIGTLGFIFGAYLSETFRGAFLGIPKGQAEAGL 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++ R+    + +PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSARQVFFRIQVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL L+ +  L +  L  + ++  K
Sbjct: 190 EPFTFFLAVAALYLVLTSVSLLALKFLERRYSVGVK 225



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 41/89 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILDGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWLAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           I  ++     ++      +     + LN 
Sbjct: 65  ILLIFYGGQDIINRVAPLLGYEDYIDLNP 93


>gi|313890671|ref|ZP_07824298.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313120982|gb|EFR44094.1| ABC transporter, permease protein [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 266

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/240 (20%), Positives = 95/240 (39%), Gaps = 3/240 (1%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH-EKTGKA 218
                +P G   + R +      +     + +   V G +  LF   L       +T   
Sbjct: 14  QFIKYIPEGKLFSWRAVFDALPDIIERLPLTIGLTVAGAIFGLFLALLFALVKLNRTKML 73

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
            P+  +    + G P LV + L Y     F K +  ++         P  +    A +  
Sbjct: 74  YPIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLNVKYGLHWNINAIPASIFAITAFAFN 133

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ +E +R+ + +V  G++EAA +LG+T  +  + V++P A     P L +  + L K
Sbjct: 134 EAAYASETIRAAIQSVDSGEIEAARSLGMTPIQVYKRVIIPNAAVVATPTLINGLIGLTK 193

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +SLA   G  ++ +    +     +  E  +    +Y  +S +I    N +   + + E
Sbjct: 194 GTSLAFNAGIVEMFAQAQILGGADYRYFERYISVALVYWFISFLIEQLGNLIEKSMTIVE 253


>gi|293602097|ref|ZP_06684550.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
 gi|292819499|gb|EFF78527.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Achromobacter piechaudii ATCC 43553]
          Length = 366

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 19/281 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPT 180
             L+A I  V V +   I             + +  +        FG+ ++ N       
Sbjct: 101 RPLIATIILVGVIICSGIRYFWNWKLAAIWTVGLTAVALLMWGGVFGLTYVENARWGGLP 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +     F+F +G++L+L      R       KAL ++YI       L +L+ ++ 
Sbjct: 161 LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIELIRGVPLISLLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+       + +   IA+  + AA+IAE VR GL A+P+GQ E A
Sbjct: 215 ---------SVMLPLFLPEGFSIDKLLRAQIAIILFAAAYIAETVRGGLQAIPKGQYEGA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV---SVGGTII 357
            +LGL + +  R ++LPQA++ +IPPL S ++ L K++SL V +G  DL        +  
Sbjct: 266 DSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDLTLAAKAALSDA 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  +E  L    IY      ++ +   L  ++A   K+
Sbjct: 326 AWRGFGVEAYLFISAIYFVFCFSMSKYSQALEKRLATDHKR 366


>gi|238928188|ref|ZP_04659948.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas flueggei ATCC 43531]
 gi|304437587|ref|ZP_07397542.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|238884148|gb|EEQ47786.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas flueggei ATCC 43531]
 gi|304369400|gb|EFM23070.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 254

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 8/228 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + L      +D    +   S V+G +L       +     +  +   L Y+  
Sbjct: 6   FDFGQIVQFLPDLLSYLDVTLLVAGLSIVIGSLLGGLL-AWANLSGSRVLRVCSLAYVYV 64

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                      I L + + +  P L    F          +   +  +    A+I+E+ R
Sbjct: 65  MRCTPP-----IVLLFIVFYGAPKLVFALFDYDMNAMHRAVFAVVTFTLLFGAYISEVFR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +   AVPRGQ EAA++ GL+  +A   V+L QA    +P   +  +NLLK +SLA  +G 
Sbjct: 120 AAYTAVPRGQYEAAVSAGLSPWQAFCHVMLGQAALIALPNFGNSTINLLKEASLAYTIGL 179

Query: 347 ADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            DL+  G  II Q      +E+ L  M IY  L ++I         ++
Sbjct: 180 IDLIGRGSLIIAQNYGAYGVEVYLSAMLIYWVLVLLIEQGFAWAEHRL 227



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 69/202 (34%), Gaps = 12/202 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A   ++  +++G L+    LS ++++      YV V R  PP+V++F +
Sbjct: 18  LLSYLDVTLLVAGLSIVIGSLLGGLLAWANLSGSRVLRVCSLAYVYVMRCTPPIVLLFIV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +               L F +F  +       +       +   +++  +  + +     
Sbjct: 78  FYGAPK----------LVFALFDYDMNAMHRAVFAVVTFTLLFGAYISEVFRAAYTAVPR 127

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
             +       L       F    L    LIAL    +    +L + +      +      
Sbjct: 128 GQYEAAVSAGLS--PWQAFCHVMLGQAALIALPNFGNSTINLLKEASLAYTIGLIDLIGR 185

Query: 269 LYIALSCYTAAFIAEIVRSGLI 290
             + ++    A+  E+  S ++
Sbjct: 186 GSLIIAQNYGAYGVEVYLSAML 207


>gi|149376082|ref|ZP_01893848.1| ABC-type arginine/histidine transport system, permease component
           [Marinobacter algicola DG893]
 gi|149359719|gb|EDM48177.1| ABC-type arginine/histidine transport system, permease component
           [Marinobacter algicola DG893]
          Length = 240

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 96/228 (42%), Gaps = 5/228 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 +      + T  ++   S +LG+++++    + R            ++  T++ 
Sbjct: 14  IFTGPTIMEYWGGLVTTVQLVFLSLILGLLVAVPL-AIMRTSKNPLINGP--VWFYTYIF 70

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + Y        + Q  +         F    +A +  TAA+  EI+R  +
Sbjct: 71  RGTPLLIQLYIIYYGLAQIEGIQQTFW--WDIFREAFYPALLAFTLNTAAYTTEIIRGAI 128

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A P G++EAA A G++     R ++LP A R  +   +++ + +L  S++A  V   DL
Sbjct: 129 VATPSGEIEAAKAYGMSWALRMRRIILPSAARRGVQAYSNEVIFMLHASAIASVVTLVDL 188

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I ++     +  +    +Y++L+ M+     +L   +   ++
Sbjct: 189 TGAARNIYSRFYAPFDAFIFVALLYMALTFMLVFAFRKLENYLLQHQR 236



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 38/107 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G V T  L F  +I   ++   +   R S N L+      Y  +FR  P L+ ++ +
Sbjct: 23  YWGGLVTTVQLVFLSLILGLLVAVPLAIMRTSKNPLINGPVWFYTYIFRGTPLLIQLYII 82

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           Y  +  +  I        F        L+F   T     +I   + V
Sbjct: 83  YYGLAQIEGIQQTFWWDIFREAFYPALLAFTLNTAAYTTEIIRGAIV 129


>gi|78067959|ref|YP_370728.1| amino acid ABC transporter inner membrane protein [Burkholderia sp.
           383]
 gi|77968704|gb|ABB10084.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia sp. 383]
          Length = 226

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + SF +G++L+ F   L+R F  +  +A    YI  F   G P LV + + +    
Sbjct: 24  VPLTLASFAIGLLLA-FGAALTRLFGPRWAQAAVRFYIWLF--RGSPLLVQLFVIFY--- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V     +  I  S    A+ AE++R  + ++P+GQ EAA ++ +T
Sbjct: 78  --------GLPSVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESIPKGQWEAAYSMAMT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R  +LPQA R  +P L++ +++L+K++SLA  +   ++      I   T + + +
Sbjct: 130 RPQALRRAILPQAARVALPALSNSFISLVKDTSLAAVLTVPEIFQAAQRIAAVTYEPMIL 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 IYL LS +++    RL  +   
Sbjct: 190 YTEAALIYLLLSSVLSTLQRRLEIRFGR 217



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 33/84 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G V T  L  +      ++       RL   +      R Y+ +FR  P LV +F +
Sbjct: 16  LVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAAVRFYIWLFRGSPLLVQLFVI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  + SV  + D       G  LN
Sbjct: 76  FYGLPSVGIVLDPLTAAVIGFSLN 99


>gi|332163539|ref|YP_004300116.1| ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325667769|gb|ADZ44413.1| ABC transporter permease [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 245

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLS------LFATRLSRHFHEKTGKALPLLYISTF 227
                  LT+  +A   V S +LG +L+      L   +     +    +  PLL    F
Sbjct: 18  WLWHGFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             F     +  +    L  + P    F  +     S EF++ +I L+CY+ AFIAE +RS
Sbjct: 78  WYFAASQFLPASWIPWL--NTPHEITFFGLTLGWPSFEFLAGFIGLTCYSTAFIAEELRS 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V +GQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A
Sbjct: 136 GISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +  +   +   +Y+++  +I  +      +
Sbjct: 196 ELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQR 239



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 41/89 (46%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ +T++G L+ A R S  K + W    Y  
Sbjct: 5   HLTDWLLAPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +    LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQFLPASWIPW 93


>gi|213691608|ref|YP_002322194.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523069|gb|ACJ51816.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457695|dbj|BAJ68316.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 366

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 114/274 (41%), Gaps = 21/274 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +   +F  +  L+++              +            +  L    +
Sbjct: 21  IRIVNWIAGI---LFAVVLVLILMRLHNPPDGENQLSWELWKPAIEREAWTDFYLPGLWM 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+       V + V G+V  +      R       + +  + +       +  L++   +
Sbjct: 78  TIKATVVAVVGAVVFGLVFGV-----GRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTETQSLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +++   IY     +++     L +++  +
Sbjct: 240 NILQTLVMAAVIYFVACWLLSRLAEWLPSRMQQR 273



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  +  V V
Sbjct: 56  ELWKPAIEREAWTDFYLPGLWMTIKATVVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|329297839|ref|ZP_08255175.1| glutamine ABC transporter permease protein [Plautia stali symbiont]
          Length = 218

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +      L      +     I +   + G ++ L A    R    K  K L L+++
Sbjct: 1   MNFDIKYIWESLPLLLQGLQLTLIISLSGLLGGFIIGLLAGT-CRALGGKIAKTLSLIFV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P++                +  + +   ++A+IAEI
Sbjct: 60  E--LIRGTPIMVQVMFIY---FALPMV-------LPIRIDPVTAAIVTIVINSSAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ RG  EA++A+GL+ R     V++P A+R +IP L +Q++  +K++SL + +
Sbjct: 108 TRGAILSINRGFKEASLAMGLSQRGTLWYVIMPLALRRMIPALGNQWIISIKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+E+      IYL +++ ++  + +L  +I +
Sbjct: 168 GVAELTRQGQEIIAGNFRALEVWTAVAMIYLLVTLCLSFLLKQLEKRIHI 217


>gi|295106092|emb|CBL03635.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 217

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 15/222 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    LS    T+       V S  LG++++            +  +  P+  ++ F I 
Sbjct: 6   MMELLLSGLAFTVQIFLVTLVGSLPLGVLVAF----------GRMSRFKPIALVTRFYIS 55

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +    L+     L F    L   N  G      ++ +  I      AA+  EI R G+ 
Sbjct: 56  VMRGTPLMLQLMALMFGPYYLLGLNMGGDW----KYWACSIGFIINYAAYFGEIYRGGIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++PRGQ EAA  LG +  +    ++LPQ ++ I+P ++++ + L+K++SLA  +G  ++ 
Sbjct: 112 SIPRGQYEAAEVLGYSKLQTFMKIVLPQVVKRILPAMSNEIITLVKDTSLAFVLGIMEMF 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S    I   +  ++   +I   IY   + ++ + + R+  K+
Sbjct: 172 SQAKAIAA-SQVSMLPYVIAGVIYWVFNFIVEIVLTRIEKKL 212



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +  +G LV  GR+S  K +A + R Y+ V R  P ++ +  L
Sbjct: 10  LLSGLAFTVQIFLVTLVGSLPLGVLVAFGRMSRFKPIALVTRFYISVMRGTPLMLQLMAL 69

Query: 149 YKS 151
              
Sbjct: 70  MFG 72


>gi|254475047|ref|ZP_05088433.1| amino acid ABC transporter, permease protein [Ruegeria sp. R11]
 gi|214029290|gb|EEB70125.1| amino acid ABC transporter, permease protein [Ruegeria sp. R11]
          Length = 440

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 72/334 (21%), Positives = 139/334 (41%), Gaps = 38/334 (11%)

Query: 70  FEIDQGIVPYTSDSSY--ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           F++ + ++ +T+   +     I  G +    +A  G + A ++    G G  +       
Sbjct: 139 FDLPRKLLAFTAVYPFIAFWLIWGGSILVPIVALLGFVAAGVVFQKYGKGSFAVGFFGGI 198

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  + V        L+       ++L  +P                R L    L M    
Sbjct: 199 LAAIVVWNVGGF--LIPEGASENAMLEAVPS---------------RDLGGFMLNMMLGV 241

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                S  LGI L+L      R       K + +++I       L TL+ +A     +F 
Sbjct: 242 TCVSLSVPLGIALAL-----GRQSTMPLIKWICVVFIEFVRGVPLITLLFVASVMLSYFF 296

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P                F+ + I ++ +++A+IAE++R GL A+P+GQ EAA +LGL +
Sbjct: 297 PP----------DATVDLFLRVVIMITLFSSAYIAEVIRGGLAALPKGQYEAADSLGLDY 346

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VSVGGTIINQ--TGQA 363
            +A RL++LPQA++  IP + +  + L K+++L   +   DL  +  G  + +    G  
Sbjct: 347 PQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVY 406

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E++    F++  +   I+ +   L  ++A   +
Sbjct: 407 WELLGFAAFLFFVVCYGISQYSQWLERRLATDHR 440


>gi|218233063|ref|YP_002365438.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|229171425|ref|ZP_04299010.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
 gi|218161020|gb|ACK61012.1| amino acid ABC transporter, permease protein [Bacillus cereus
           B4264]
 gi|228612129|gb|EEK69366.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus MM3]
          Length = 214

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      + SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIILSFIIGSVIGIL-------RYMKIPVVSQILGIVVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYTIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   +I + IIG+++G  R     +V+ I  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIVVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|13472038|ref|NP_103605.1| permease protein of amino acid ABC transporter [Mesorhizobium loti
           MAFF303099]
 gi|14022783|dbj|BAB49391.1| permease protein of amino acid ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 224

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S VLG VL      L R    +    +   ++   LI G P LV I L +  
Sbjct: 22  MTVVLSLISLVLGTVLGFGLGIL-RTGGNRLLSGIIGAWVD--LIRGTPFLVQIFLIF-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F +  IAL+   A FI EIV +G+ +VP GQ+EAA+A G
Sbjct: 77  ---------FILPEFGIELDAFTAGIIALTNLAACFICEIVAAGIRSVPTGQVEAALASG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  R V+LPQAMR ++PPL  QY+ L+K+SS+  A+G  DL  VG  ++ +    +
Sbjct: 128 LSRWQRMRQVVLPQAMRIVMPPLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQRVPNGL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  +    Y  +   + +   RL  ++ 
Sbjct: 188 LVFFLVGVGYFIVCYPLIMLARRLERRMG 216



 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 33/69 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+   ++  T++G  +G  R   N+L++ I   +V++ R  P LV IF ++
Sbjct: 17  LRGLGMTVVLSLISLVLGTVLGFGLGILRTGGNRLLSGIIGAWVDLIRGTPFLVQIFLIF 76

Query: 150 KSVLSVLPI 158
             +      
Sbjct: 77  FILPEFGIE 85


>gi|293603254|ref|ZP_06685685.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818343|gb|EFF77393.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 233

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 9/237 (3%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                     F     +        T+      +V +F +G +L++            TG
Sbjct: 1   MHYVFDFNAIFQGEYPSWLFRGFVTTLALAGLAWVLAFCVGSLLAVIR---------LTG 51

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
             +    I+T++ F     +L+ + +       +L Q      ++   EF+   IA+S  
Sbjct: 52  SPVANAVIATYVAFHRNVPMLVHILFWYFGVPALLPQAASDWLNSHGSEFIMSCIAISLV 111

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A+I E +RS +  +P GQ+EAA ALGL   +  R V+LPQA R  IPPL +Q L LLK
Sbjct: 112 MSAYICEDLRSAVRGIPPGQVEAARALGLGFLRTMRCVVLPQAFRIAIPPLLNQTLLLLK 171

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           N+SLA+A+G  +L + G  I N T +  E   +   IYL LS +I      L  +  
Sbjct: 172 NTSLAMAIGVTELTAAGREIENYTFRTFEAYAVVTVIYLVLSFLIMGGGAILQRRYR 228



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 40/84 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GFV T  LA    + A  +G+L+   RL+ + +   +   YV   RN+P LV 
Sbjct: 15  YPSWLFRGFVTTLALAGLAWVLAFCVGSLLAVIRLTGSPVANAVIATYVAFHRNVPMLVH 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           I F Y  V ++LP      +   G
Sbjct: 75  ILFWYFGVPALLPQAASDWLNSHG 98


>gi|213971202|ref|ZP_03399320.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301382331|ref|ZP_07230749.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302132165|ref|ZP_07258155.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213924071|gb|EEB57648.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331017119|gb|EGH97175.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 231

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 3/181 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +            +     F +  
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNGMRALGEWLGIPNLALSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++  + M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEK 220

Query: 391 K 391
            
Sbjct: 221 H 221


>gi|318608045|emb|CBY29543.1| amino acid ABC transporter, permease protein [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 245

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLS------LFATRLSRHFHEKTGKALPLLYISTF 227
                  LT+  +A   V S +LG +L+      L   +     +    +  PLL    F
Sbjct: 18  WLWHGFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             F     +  +    L  + P    F  +     S EF++ +I L+CY+ AFIAE +RS
Sbjct: 78  WYFAASQFLPASWIPWL--NTPHEITFFGLTLGWPSFEFLAGFIGLTCYSTAFIAEELRS 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V +GQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A
Sbjct: 136 GISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +  +   +   +Y+++  +I  +      +
Sbjct: 196 ELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQR 239



 Score = 64.2 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 41/89 (46%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ +T++G L+ A R S  K + W    Y  
Sbjct: 5   HLTDWLLVPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +    LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQFLPASWIPW 93


>gi|253687971|ref|YP_003017161.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754549|gb|ACT12625.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 219

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P +V +   Y   F  P+      I  S     F
Sbjct: 42  FARAYGGWFSSRISLVFIE--IIRGTPIVVQVMFIY---FALPM------IFTSVRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 91  AAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRRATLRHVIAPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLILSFILR 210

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 211 RLERRLKI 218


>gi|170695848|ref|ZP_02886989.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139272|gb|EDT07459.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 251

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 12/193 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R             YI  F   G P L+ + L Y        +GQF  I  S + P    
Sbjct: 44  RVSPHWLPNRFARAYILVF--RGSPLLIQMFLVYY------GMGQFGVIRESFLWPVLRE 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            +M   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+     R V+ P A+R  +
Sbjct: 96  PYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ +I   
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVIVRA 215

Query: 385 MNRLNAKIALKEK 397
           ++ L  +++   +
Sbjct: 216 LSMLETRLSRHLR 228



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L     T  L F  ++   ++  ++   R+S + L     R Y+ VFR  P L+ +F
Sbjct: 13  RQLLAAVPTTLGLFFCSLVLGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMF 72

Query: 147 FLYKSVLSVLPIPDHSIVL 165
            +Y  +     I +  +  
Sbjct: 73  LVYYGMGQFGVIRESFLWP 91


>gi|163800419|ref|ZP_02194320.1| arginine ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175862|gb|EDP60656.1| arginine ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 229

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 7/212 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G+VL++     S     +     P+    T +      LV++ + + 
Sbjct: 15  WMTVQLAFASLLVGLVLAVAFA--SGEMSRRVIVKWPMTVFVTIVRGLPEILVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  +ALS   A++ ++ +R  L AV RGQ EAA AL
Sbjct: 73  -----STQVLFLVTGDFIEVSPFLSGVVALSLIFASYASQTLRGALKAVGRGQSEAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +A   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GISQTQAFVCIVLPQAIRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    IYL ++++    +  ++ K +++
Sbjct: 188 FTWYATAAAIYLVITLVTQRVVKMIDKKFSIQ 219


>gi|254454563|ref|ZP_05068000.1| polar amino acid ABC transport permease protein AapM-1
           [Octadecabacter antarcticus 238]
 gi|198268969|gb|EDY93239.1| polar amino acid ABC transport permease protein AapM-1
           [Octadecabacter antarcticus 238]
          Length = 775

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 18/214 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V S  LGI+L+L      R  H      + + +I   +I G+P +V +        
Sbjct: 577 IAGIVLSLPLGILLAL-----GRQSHLFIVNKICVTFIE--VIRGVPLIVWLFTG----- 624

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L    F+   T     + + I ++ + AA+IAE++R GL A+  GQ E A +LGL+
Sbjct: 625 ---SLLLNYFLPPGTNFDLLLRVIIMVTLFAAAYIAEVIRGGLAALATGQYEGADSLGLS 681

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQA 363
           + ++ RL++LPQAM+  IP + + ++ L K+++L V +G +D +     I   T   G  
Sbjct: 682 YWQSMRLIVLPQAMKISIPGIVNTFIGLFKDTTLVVFIGLSDPIGFSNLIRADTDWNGIY 741

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E+ +    ++      +  +   L  K+  + +
Sbjct: 742 WELFVFIGALFFIFCFSMGRYSLHLEKKLQREHR 775



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 68/194 (35%), Gaps = 9/194 (4%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+    +  +G++ +  +G L+  GR S   +V  IC  ++EV R +P L+V  F    
Sbjct: 568 GFMLALIIGIAGIVLSLPLGILLALGRQSHLFIVNKICVTFIEVIRGVP-LIVWLFTGSL 626

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-------LGIVLSLFA 204
           +L+    P  +  L   + +     +   +       +   +         LG+     +
Sbjct: 627 LLNYFLPPGTNFDLLLRVIIMVTLFAAAYIAEVIRGGLAALATGQYEGADSLGLSY-WQS 685

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            RL             ++     L      +V I L   + F   +    ++ G      
Sbjct: 686 MRLIVLPQAMKISIPGIVNTFIGLFKDTTLVVFIGLSDPIGFSNLIRADTDWNGIYWELF 745

Query: 265 EFMSLYIALSCYTA 278
            F+     + C++ 
Sbjct: 746 VFIGALFFIFCFSM 759


>gi|54309259|ref|YP_130279.1| arginine transporter permease subunit ArtQ [Photobacterium
           profundum SS9]
 gi|46913691|emb|CAG20477.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum SS9]
          Length = 229

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 11/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   +    +T+       +   VL ++ +      SR        A P     T L  
Sbjct: 6   YSMSLVEASWMTIQLAFASLLVGLVLAVIFASGEMSRSR------LVAWPTTAFVTILRG 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV++ + +           F   G       F+S  IALS   A++ A+ +R  L 
Sbjct: 60  LPEILVVLFIFFGSGQVL-----FMITGDYVDISPFVSGVIALSLIFASYAAQTIRGALK 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ EAA ALG++   +   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+
Sbjct: 115 AVNNGQREAASALGISKAHSFFRIILPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLL 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    T +A         IYL ++++    +  ++ K  ++
Sbjct: 175 KQAQLTSAATHEAFTWYATAAAIYLVITLITQRAVKVIDKKFTVQ 219


>gi|330877360|gb|EGH11509.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330966688|gb|EGH66948.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 221

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+       V   VLG VL+L      R    K    +   Y++ F      ++
Sbjct: 14  WNGMVMTLKLMTLGIVGGLVLGTVLALM-----RLSSNKLLANVAGAYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 64  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 123 QMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 183 SGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV 221



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   ++GT++   RLS+NKL+A +   YV  FR+IP L+VI + 
Sbjct: 13  LWNGMVMTLKLMTLGIVGGLVLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 73  YLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEI 111


>gi|283784570|ref|YP_003364435.1| glutamine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282948024|emb|CBG87588.1| glutamine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 219

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I +     GIV+ L A  L+R +       + L++I
Sbjct: 1   MQFDWSAIWPAIPILLQGAKMTLWISILGLAGGIVIGLLAG-LARTYGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +     ++F  P+               F +  I +   + A+IAEI
Sbjct: 60  E--IIRGTPIVVQVM---YIYFALPMAFP------DLRIDTFSAAVITIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+ R+  R V++P A+R ++P L +Q +  +K++SL + +
Sbjct: 109 TRGSVLSIHKGFSEAGLALGLSRRETIRHVIMPLALRRMLPSLGNQLIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+EI      +YL ++ ++ + +  L  ++ +
Sbjct: 169 GAAELTRSGQEIIAGNFRALEIWTAVGVVYLIITQVLNIVLRSLERRMKI 218



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 1/134 (0%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G+    +IG L G  R     +   +  V++E+ R
Sbjct: 4   DWSAIWPAIPILLQGAKMTLWISILGLAGGIVIGLLAGLARTYGGWIANHVALVFIEIIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-L 196
             P +V + ++Y ++    P           + +     ++       +       F   
Sbjct: 64  GTPIVVQVMYIYFALPMAFPDLRIDTFSAAVITIMINSGAYIAEITRGSVLSIHKGFSEA 123

Query: 197 GIVLSLFATRLSRH 210
           G+ L L      RH
Sbjct: 124 GLALGLSRRETIRH 137


>gi|282932631|ref|ZP_06338047.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 208-1]
 gi|281303263|gb|EFA95449.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 208-1]
          Length = 120

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/120 (41%), Positives = 75/120 (62%)

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S YT+AFIAE +R+G+ +V  GQME A + G+T+ +A R V+LPQA +  IP L +Q++N
Sbjct: 1   SLYTSAFIAECIRAGINSVGDGQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQFIN 60

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+KNSS+   V   DL+  G  I   + Q +   L+    YL L++ ++ +M  L  KIA
Sbjct: 61  LIKNSSVLAFVAGFDLMYQGDVIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLEKKIA 120


>gi|270262830|ref|ZP_06191101.1| transporter [Serratia odorifera 4Rx13]
 gi|270043514|gb|EFA16607.1| transporter [Serratia odorifera 4Rx13]
          Length = 234

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++    ++R       +    LY  T++  G P
Sbjct: 14  WSDGYRFTGVAVTLWLLISSVVMGGLLAI-PMAVARVSSISWVRFPVWLY--TYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   +F+  +          +AL+  T A+  EI    + AVP
Sbjct: 71  LYVQLLVFYSGMYSLEIVRGTDFL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R+ +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAASAYGFSRFKMYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL++S ++     +   +
Sbjct: 190 RDINAATYQPFYAFGIAAVLYLAISYVLISLFRKAEKR 227



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 31/79 (39%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL  S ++   ++   +   R+S+   V +   +Y  +FR  P  V +   Y
Sbjct: 20  FTGVAVTLWLLISSVVMGGLLAIPMAVARVSSISWVRFPVWLYTYIFRGTPLYVQLLVFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + S+  +     +  F 
Sbjct: 80  SGMYSLEIVRGTDFLNAFF 98


>gi|261213026|ref|ZP_05927310.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
 gi|260838091|gb|EEX64768.1| amino acid ABC transporter permease protein [Vibrio sp. RC341]
          Length = 298

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYIS 225
              L     T+  +    V + VLG ++ +  +R +          +       PL+++ 
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H ++         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRNHIEEVHPLVTGLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLSLSMLFKQVEKR 291



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGI-------VPYTSD-SSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           + +T          L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYHWHWHEAWSLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL----------SVLPI 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  +            +L  
Sbjct: 85  VLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRN 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +            L    L+      +   +++  IV +  A      +       
Sbjct: 145 HIEEVHPLVTGLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|66047137|ref|YP_236978.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|71736860|ref|YP_276041.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257486607|ref|ZP_05640648.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289624940|ref|ZP_06457894.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289650483|ref|ZP_06481826.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|289676729|ref|ZP_06497619.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
 gi|298488718|ref|ZP_07006747.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|302185659|ref|ZP_07262332.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
 gi|63257844|gb|AAY38940.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|71557413|gb|AAZ36624.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298156791|gb|EFH97882.1| glutamate/aspartate transport system permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320325612|gb|EFW81674.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327104|gb|EFW83118.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330867230|gb|EGH01939.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330889549|gb|EGH22210.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330937578|gb|EGH41517.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330950014|gb|EGH50274.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
 gi|330989513|gb|EGH87616.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331010090|gb|EGH90146.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 221

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+   A   V   VLG +L+L      R    K    +   Y++ F      ++
Sbjct: 14  WNGMVMTLKLMAMGVVGGLVLGTLLALM-----RLSSNKLLANVAGAYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 64  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 123 QMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 183 SGDIIGRANEFLIIAGLVYFTISFAASLLVKRLQKRFAV 221



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   ++GTL+   RLS+NKL+A +   YV  FR+IP L+VI + 
Sbjct: 13  LWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 73  YLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEI 111


>gi|313771501|gb|EFS37467.1| conserved hypothetical protein [Propionibacterium acnes HL074PA1]
 gi|313811372|gb|EFS49086.1| conserved hypothetical protein [Propionibacterium acnes HL083PA1]
 gi|313830874|gb|EFS68588.1| conserved hypothetical protein [Propionibacterium acnes HL007PA1]
 gi|313833301|gb|EFS71015.1| conserved hypothetical protein [Propionibacterium acnes HL056PA1]
 gi|314973761|gb|EFT17857.1| conserved hypothetical protein [Propionibacterium acnes HL053PA1]
 gi|314976410|gb|EFT20505.1| conserved hypothetical protein [Propionibacterium acnes HL045PA1]
 gi|314983309|gb|EFT27401.1| conserved hypothetical protein [Propionibacterium acnes HL005PA1]
 gi|315096537|gb|EFT68513.1| conserved hypothetical protein [Propionibacterium acnes HL038PA1]
 gi|327326786|gb|EGE68569.1| amino acid ABC transporter, permease protein [Propionibacterium
           acnes HL096PA2]
 gi|327443012|gb|EGE89666.1| hypothetical protein HMPREF9570_02518 [Propionibacterium acnes
           HL043PA1]
 gi|327445134|gb|EGE91788.1| hypothetical protein HMPREF9571_02120 [Propionibacterium acnes
           HL043PA2]
 gi|328760217|gb|EGF73790.1| amino acid ABC transporter, permease protein [Propionibacterium
           acnes HL099PA1]
          Length = 182

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 1/144 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +    V     +  I L     A++AEI RSGL +V  GQ EAA ALG+      R
Sbjct: 7   QFASVETEKVVTALAAAIIGLGLNEGAYLAEITRSGLESVDVGQTEAAKALGMKPSLIVR 66

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
             ++PQAMR IIPP  ++ + +LK +SL +A+ F  DL      I N T   I ++++  
Sbjct: 67  RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
             YL ++ ++ +  + L       
Sbjct: 127 CWYLVMTSVLMIGQHFLEQYFGRG 150


>gi|315283402|ref|ZP_07871606.1| L-cystine transport system permease protein TcyL [Listeria marthii
           FSL S4-120]
 gi|313612951|gb|EFR86889.1| L-cystine transport system permease protein TcyL [Listeria marthii
           FSL S4-120]
          Length = 238

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +          +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVIL-SLPRIYKIPVLNQFARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSVFGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL  R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSVGLNGRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYITAVLLEYSFKWIEKRVKKENTR 229



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 34/75 (45%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G ++   R+    ++    RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVILSLPRIYKIPVLNQFARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             +    +     ++
Sbjct: 84  SSVFGIDLSQMDPLY 98


>gi|257063425|ref|YP_003143097.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
 gi|256791078|gb|ACV21748.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
          Length = 220

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 99/212 (46%), Gaps = 11/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +IF+ + +  + L +    L R    K    L  +Y+S  ++ G P ++ + +    
Sbjct: 19  MTVRIFIITLIGALPLGVVV-ALCRMSSFKPLALLARIYVS--ILRGTPLMLQLFVWM-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F    +   +F  G T+     +  I      +A+  EI RSG+ ++PRGQ EAA  LG
Sbjct: 74  -FAPYYMFGLSFGPGWTM----TACSIGFILNYSAYFGEIYRSGIQSIPRGQYEAAEVLG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +    ++LPQ ++ I+P + ++ + L+K++SLA  +G A++ +    +  +    +
Sbjct: 129 YTKVQTFMYIILPQVIKRILPAMGNEIIALVKDTSLAFVLGVAEMFTFAKALAAKHVSML 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               I   IY   ++ +   +N++   ++   
Sbjct: 189 P-YAIAAVIYWIFTLFVEFVLNKIEKSMSYYH 219



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 34/65 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T ++ GF  T  +    +I A  +G +V   R+S+ K +A + R+YV + R  P ++ +F
Sbjct: 11  TTLVSGFGMTVRIFIITLIGALPLGVVVALCRMSSFKPLALLARIYVSILRGTPLMLQLF 70

Query: 147 FLYKS 151
               +
Sbjct: 71  VWMFA 75


>gi|91789814|ref|YP_550766.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91699039|gb|ABE45868.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 219

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 18/236 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            ++  FG       +     T+   A   +   V+G   ++     +R  H    +   +
Sbjct: 1   MMIESFGFPEFMFLIRSLGWTLALTASSLLLGSVIGAFFAI-----ARVSHNNLLRNAAV 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYI   ++ GLP L+++ L Y           F         P  +   IAL  Y  A++
Sbjct: 56  LYIQ--VLQGLPVLLVLFLAY-----------FGLAYMGFDPPALVIATIALGLYAGAYL 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           A+I R  + +VP  Q EA+ +L +T  +  R ++LPQ++R  +PP     + L+KN+S+ 
Sbjct: 103 ADIWRGAMESVPYQQWEASSSLAMTRAQQFRFIILPQSVRISLPPTVGFLVQLIKNTSIV 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             VG+ DL+  G  I         +  I   +Y SL   ++     L  K+    +
Sbjct: 163 SVVGYIDLMRAGEHIETSLHSPFMVYGIVALLYFSLCFPLSHLSKMLERKVHADRQ 218


>gi|146312498|ref|YP_001177572.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145319374|gb|ABP61521.1| L-histidine ABC transporter membrane protein / L-lysine ABC
           transporter membrane protein / L-ornithine ABC
           transporter membrane protein / L-arginine ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 237

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++F   + R  + K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLISSVVVGGILAVFL-AIGRVSNNKYIRF--PIWLFTYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++     +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEIL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EA  A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 YGEIEAGRAYGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|307545357|ref|YP_003897836.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307217381|emb|CBV42651.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 237

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 2/212 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  +I V ++ +G+ L L     +R       + L  LY +         L+++      
Sbjct: 22  TTLEIAVLAYAIGLALGLLGAS-ARLSPWAPLRGLATLYSTAVRAVPELLLIILLYYAGS 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                V     F G   ++  F++    L+    A++ E++R  ++A+PRGQ+EAA A G
Sbjct: 81  QALTAVTNAMGFSGQVAIN-GFVTAVGVLAFVQGAYMTEVLRGAILAIPRGQLEAADAFG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +     R +++P  + + +P +++ +L L+K+++L   +G+++L        + T    
Sbjct: 140 FSTWARFRRIVVPAMLPNALPGMSNLWLILIKDTALISVIGYSELFFTIQQAASSTRAHF 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                   IYL++++       RL  ++   +
Sbjct: 200 LFYAAAGVIYLAMTLSSTALFARLERRLRRGQ 231



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 73/214 (34%), Gaps = 12/214 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  IL G + T  +A         +G L  + RLS    +  +  +Y    R +P L++
Sbjct: 12  WAGPILQGALTTLEIAVLAYAIGLALGLLGASARLSPWAPLRGLATLYSTAVRAVPELLL 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVL-- 200
           I  LY +    L    +++     + +N    +   L     A +   +   +L I    
Sbjct: 72  IILLYYAGSQALTAVTNAMGFSGQVAINGFVTAVGVLAFVQGAYMTEVLRGAILAIPRGQ 131

Query: 201 -----SLFATRLSRHFHEKTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLG 252
                +   +  +R         LP       + +LI    T ++  + Y   F      
Sbjct: 132 LEAADAFGFSTWARFRRIVVPAMLPNALPGMSNLWLILIKDTALISVIGYSELFFTIQQA 191

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             +             +Y+A++  + A  A + R
Sbjct: 192 ASSTRAHFLFYAAAGVIYLAMTLSSTALFARLER 225


>gi|300871131|ref|YP_003786003.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brachyspira pilosicoli 95/1000]
 gi|300688831|gb|ADK31502.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Brachyspira pilosicoli 95/1000]
          Length = 205

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 16/220 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +    +T+       +FS  L I+ +       +           +  I  +L  G P +
Sbjct: 1   MKGTYVTISLYLVTAIFSMPLSIIFAALQFSAPKFVRY-------IFDIYAWLFRGTPLI 53

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++            P F S  I      AA++ EI R+G+ ++ +G
Sbjct: 54  LQLIFFY---YGIPLITN-----NKIAFPAFTSAAITFVLNYAAYLMEIFRAGIESIDKG 105

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L +R+    ++LPQA+R ++PPL+++ +NL+K++SL + +G  DL+     
Sbjct: 106 QYEAAYVLNLNYRQIMTRIILPQAIRKVLPPLSNEAINLIKDTSLVIVLGIGDLMLYARQ 165

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++ +  + I   +I   IYL  + +I +    L  K  ++
Sbjct: 166 VLTRDFKLIP-FVIAGIIYLLFTFVIVVLFRNLEKKYVIR 204


>gi|241661991|ref|YP_002980351.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240864018|gb|ACS61679.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 242

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 113/233 (48%), Gaps = 4/233 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +  V       N   L +    + T   + + S+++ +V+      L R    K    
Sbjct: 4   HWNWGVFFTEAAQNQTYLDWLLAGLKTTVVLGLSSWIIALVIGSVLGVL-RTVPNKWLSG 62

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   Y+  F    +P +V + + Y +  +  V G       +  +  F+   + L  +TA
Sbjct: 63  LAAAYVEVF--RNIPLIVQLFIWYFVMPEL-VPGGDYIKQMNPATAMFLCAMLCLGTFTA 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP + R I+PPLTS++LN+ KNS
Sbjct: 120 ARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRYVMLPMSFRIIVPPLTSEFLNIFKNS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M  + A+
Sbjct: 180 AVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGLMRWVEAR 232



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 45/86 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A +IG+++G  R   NK ++ +   YVEVFRNIP
Sbjct: 16  QNQTYLDWLLAGLKTTVVLGLSSWIIALVIGSVLGVLRTVPNKWLSGLAAAYVEVFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            +V +F  Y  +  ++P  D+   + 
Sbjct: 76  LIVQLFIWYFVMPELVPGGDYIKQMN 101


>gi|312797283|ref|YP_004030205.1| glutamate/aspartate transport system permease protein gltJ
           [Burkholderia rhizoxinica HKI 454]
 gi|312169058|emb|CBW76061.1| Glutamate/aspartate transport system permease protein gltJ
           [Burkholderia rhizoxinica HKI 454]
          Length = 246

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 4/240 (1%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
                   + P         L +    +     + + ++V+ + +      L R    K 
Sbjct: 3   YHWNWGIFMTPVSTGEPTTYLGWLISGLWNTVAVSLCAWVIALFVGALMGVL-RTMPNKW 61

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
              +  +Y++ F    +P +V   + Y  L    P      F      +  F +  + L 
Sbjct: 62  LSGIGTVYVAVF--RNIPLIVQFFIWYFVLPEILPPSIGTWFKQLPPNAQFFSASILCLG 119

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +TAA + E VRSG+ A+PRGQ  A +ALG T  +  R V+LP A R I+PPLTS++LN+
Sbjct: 120 LFTAARVCEQVRSGIHALPRGQRAAGLALGFTLPQTYRHVMLPVAFRIIVPPLTSEFLNI 179

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            KNS++A  +G  DL +    +++ T QA E  +     Y+ +++++  FM  +  K  L
Sbjct: 180 FKNSAVASTIGLLDLSAQARQLVDYTAQAYESFIAVTIAYVLINLVVMGFMRWVEKKTRL 239



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 44/94 (46%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ G  NT  ++    + A  +G L+G  R   NK ++ I 
Sbjct: 7   WGIFMTPVSTGEPTTYLGWLISGLWNTVAVSLCAWVIALFVGALMGVLRTMPNKWLSGIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            VYV VFRNIP +V  F  Y  +  +LP    + 
Sbjct: 67  TVYVAVFRNIPLIVQFFIWYFVLPEILPPSIGTW 100


>gi|119946081|ref|YP_943761.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119864685|gb|ABM04162.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 216

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 14/230 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              F +   L            + +F+F+ G    L    L+     K      L+ I  
Sbjct: 1   MMQFTDWDILRNLLFAARWTLLLSLFAFIGG---GLVGLALTFIRSIKNPFLTKLVQIYV 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            L  G+P L+ + L +           F           + +  ++L+ +++AF+ +I R
Sbjct: 58  ELFQGIPLLMQLFLTF-----------FGLSLIGLDVDAWSAAILSLTLFSSAFLHDIWR 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S + A+P+GQ EA   LGLTH ++ R V+ PQA++  I P     + ++K ++LA  +GF
Sbjct: 107 SCIEALPKGQWEACRTLGLTHVQSMRHVIFPQAIKMAIAPTVGFSVQIVKGTALASIIGF 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +L   G  + N T Q  ++  +   +Y  +   +++    L  K  ++ 
Sbjct: 167 VELTKAGTMLNNATFQPFKVFALVALLYFVICFPLSVLARYLENKNYVRR 216



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 37/107 (34%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L     T  L+    I   ++G  +   R   N  +  + ++YVE+F+ IP 
Sbjct: 6   DWDILRNLLFAARWTLLLSLFAFIGGGLVGLALTFIRSIKNPFLTKLVQIYVELFQGIPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  +  +    D        + L +             A 
Sbjct: 66  LMQLFLTFFGLSLIGLDVDAWSAAILSLTLFSSAFLHDIWRSCIEAL 112


>gi|254456079|ref|ZP_05069508.1| ABC transporter, membrane spanning protein (nopaline) [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207083081|gb|EDZ60507.1| ABC transporter, membrane spanning protein (nopaline) [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 224

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 5/209 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+   S + G+ L LF   L  + +    K     Y  +++  G P LV I + Y    
Sbjct: 21  LKLLSVSLIAGMFLGLFFAVLRMNNNIFINKF---AYGYSYVFRGTPLLVQIFIIY-FGL 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            +    +  FI      P +    IA +  T A+ +EI+RS    +  G +EA  +LG++
Sbjct: 77  GQIEYLRSTFIWVILKEP-YWCAIIAFALNTGAYTSEILRSAFQTIKPGIIEAGKSLGIS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           ++     + +P A+R  +P   ++ + ++K +SLA  V   DL  V   II+ T + IE+
Sbjct: 136 NKIIFYKIQIPIAIRQSLPAYGNEIILMMKGTSLASTVTLMDLTGVAKYIISTTFKPIEV 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            ++   IYL ++ +I   +  L  K + +
Sbjct: 196 FIVAGGIYLFMTFLIHNLIKYLEKKYSFQ 224



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   V T  L    +I    +G      R++ N  +      Y  VFR  P LV IF +
Sbjct: 13  LLSATVITLKLLSVSLIAGMFLGLFFAVLRMNNNIFINKFAYGYSYVFRGTPLLVQIFII 72

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 73  YFGLGQI 79


>gi|327463113|gb|EGF09434.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
          Length = 226

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 10/176 (5%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  + L  +++        P LV   + +   +  P++  +     + +   + +  + +
Sbjct: 52  KVLRGLARVFVEF--YQNTPLLVQFVIVF---YGLPLVSNY-----TIMPSIYWTAVLCV 101

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y  A+IAE++RSG+ ++PRGQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +N
Sbjct: 102 GLYHGAYIAEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVN 161

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           L+KN+S    +   DL+ V  +        I        +Y  L   IA +  R+ 
Sbjct: 162 LIKNTSTVAIISGMDLMFVTKSWSALNSNYIPAFAGAALLYFLLCFPIASWGRRVE 217



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +  A ++G   GA     +K++  + RV+VE ++N P LV    +
Sbjct: 18  FFQGFLFTLSISIGALTLALLLGIFFGAISTGKHKVLRGLARVFVEFYQNTPLLVQFVIV 77

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  V        +  
Sbjct: 78  FYGLPLVSNYTIMPSIYW 95


>gi|315122482|ref|YP_004062971.1| amino acid ABC transporter (permease) [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495884|gb|ADR52483.1| amino acid ABC transporter (permease) [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 239

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 14/214 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                    I + SF+  I++ L  T +   F  K    + L     ++  G P LV + 
Sbjct: 18  YAAFFVTLPIALISFIPSIIVGLSITMIRICFPGKISFIMHL---YVWIFRGTPLLVQLF 74

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +                   V   F ++ I+ +   +A+I+EI+RS ++++P+GQ +A
Sbjct: 75  IIFY-----------GLPHIGIVLDCFSAIVISFTLNFSAYISEIIRSSILSIPKGQWDA 123

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++GLT ++  R ++LPQ +     PL+S+++++LK++SLA  V   ++      I++ 
Sbjct: 124 AYSIGLTRQQTIRHIILPQIVVISAAPLSSEFISILKSTSLASTVTLPEIFQTAQRIVST 183

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T Q + I      IYL L+    +   ++ +K+ 
Sbjct: 184 TYQPLIIYCEIAIIYLILTSFCYIIQMKIESKLK 217



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 35/75 (46%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+   +   F  T  +A    IP+ I+G  +   R+     +++I  +YV +FR  P L
Sbjct: 11  DSFPQLLYAAFFVTLPIALISFIPSIIVGLSITMIRICFPGKISFIMHLYVWIFRGTPLL 70

Query: 143 VVIFFLYKSVLSVLP 157
           V +F ++  +  +  
Sbjct: 71  VQLFIIFYGLPHIGI 85


>gi|300312813|ref|YP_003776905.1| glutamate/aspartate ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300075598|gb|ADJ64997.1| ABC-type glutamate/aspartate transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 241

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 12/241 (4%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
                       G    +  LS   +T+      ++ + VLG  L +      R    + 
Sbjct: 5   WQWSVFLQAPSTGQTYLDWLLSGLGVTVALGLSAWILALVLGTFLGIL-----RTLPNRA 59

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIAL 273
                  Y+  F    +P LV I + Y   F  P L  +         ++ +F+   + L
Sbjct: 60  LSGFAACYVELF--RNVPLLVQIFIWY---FAMPELLPWGDAVKALPPMTQQFVMAMLCL 114

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +TAA + E VRSG+ ++PRGQ  A +ALGLT  +    VLLP AMR ++PPLTS++LN
Sbjct: 115 GMFTAARVCEQVRSGIESLPRGQKGAGLALGLTLGQTYLFVLLPMAMRIVLPPLTSEFLN 174

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  +L + G  +++ T Q  E  +     Y+ ++I +   M  L  K +
Sbjct: 175 IFKNSAVASTIGLLELAAQGRQLVDYTAQPYEAFIAVTLAYMLINICVMSLMRILERKTS 234

Query: 394 L 394
           L
Sbjct: 235 L 235



 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/87 (34%), Positives = 45/87 (51%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           ++  +Y   +L G   T  L  S  I A ++GT +G  R   N+ ++     YVE+FRN+
Sbjct: 15  STGQTYLDWLLSGLGVTVALGLSAWILALVLGTFLGILRTLPNRALSGFAACYVELFRNV 74

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           P LV IF  Y ++  +LP  D    LP
Sbjct: 75  PLLVQIFIWYFAMPELLPWGDAVKALP 101


>gi|104782330|ref|YP_608828.1| arginine/ornithine ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95111317|emb|CAK16037.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 232

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 13/223 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L      +    K+ + S   G+VL++    L R       +    LY  T++I G 
Sbjct: 9   WQNLPLYLGGIALTLKVLLISLACGLVLAIPL-ALMRVSRSCLLRVPAWLY--TYVIRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY----IALSCYTAAFIAEIVRSG 288
           P LV + L Y        L QF  +  S + P   S      +A +  T+A+ AE++   
Sbjct: 66  PMLVQLFLIYY------GLAQFEAVRQSPLWPYLSSATFCTCLAFAINTSAYSAELLAGS 119

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A PRG++EAA A+G++     R +LLP A+R  +P  +++ L +L+ +SLA  V   D
Sbjct: 120 LRATPRGELEAARAMGMSRLTLYRRILLPSALRRALPQYSNEVLMMLQTTSLASIVTLVD 179

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +     T   +     E  +    IYL L+ ++         +
Sbjct: 180 ITGAAKTFNARYYLPFEAFITAGLIYLVLTFILVRLFKLAERR 222



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 41/119 (34%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ Y+         L G   T  +    +    ++   +   R+S + L+     +Y  V
Sbjct: 2   MLDYSLIWQNLPLYLGGIALTLKVLLISLACGLVLAIPLALMRVSRSCLLRVPAWLYTYV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            R  P LV +F +Y  +     +    +            L+F   T   +A++   S 
Sbjct: 62  IRGTPMLVQLFLIYYGLAQFEAVRQSPLWPYLSSATFCTCLAFAINTSAYSAELLAGSL 120


>gi|239620728|ref|ZP_04663759.1| glutamate transport system permease protein gluD [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|239516304|gb|EEQ56171.1| glutamate transport system permease protein gluD [Bifidobacterium
           longum subsp. infantis CCUG 52486]
          Length = 366

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 114/274 (41%), Gaps = 21/274 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +   +F  +  L+++              +            +  L    +
Sbjct: 21  IRIVNWIAGI---LFAVVLVLILMRLHNPPDGENQLSWELWKPAIEREAWTDFYLPGLWM 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+       V + V G+V  +      R       + +  + +       +  L++   +
Sbjct: 78  TIKATVVAVVGAVVFGLVFGV-----GRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTETQSLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +++   IY     +++     L A++  +
Sbjct: 240 NILQTLVMAAVIYFIACWLLSRLAEWLPARMQQR 273



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  +  V V
Sbjct: 56  ELWKPAIEREAWTDFYLPGLWMTIKATVVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|167586130|ref|ZP_02378518.1| hypothetical protein BuboB_12374 [Burkholderia ubonensis Bu]
          Length = 246

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 4/238 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         K+ + ++V+ +V+      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFGVTIKVSLTAWVIALVVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFIWYLVVPELLPPSIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  K
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMAFMRWVEGK 236



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 47/95 (49%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFGVTIKVSLTAWVIALVVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFIWYLVVPELLPPSIGTWI 101


>gi|113868713|ref|YP_727202.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527489|emb|CAJ93834.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 216

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 18/223 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+      F    ++G+ L+L  +R  R     TG           L+ G+P
Sbjct: 11  FILRGAGWTLLLAGMGFAGGALVGVPLALARSRGGRVLRTLTGA-------YVQLVQGVP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V++ + Y           F    G    P  ++  IA++ Y++A++ EI +  + AVP
Sbjct: 64  LPVIMFVVY-----------FGISVGGFELPALVAAGIAMTAYSSAYLGEIWKGCIQAVP 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R Q EAA  L LT  +    V+LPQA R  I P  S  + ++KNSS AV +GF DL    
Sbjct: 113 RTQWEAAECLALTPLQRAVYVILPQAARIAIAPTVSFLVQIVKNSSYAVVIGFFDLTYSA 172

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             + N T +   +  I   +Y ++   ++    RL  +     
Sbjct: 173 RVVNNSTFKPFLVFTIAAALYFAICYPLSSLSYRLERRFNKAR 215


>gi|239941506|ref|ZP_04693443.1| putative amino acid ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239987970|ref|ZP_04708634.1| putative amino acid ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291444950|ref|ZP_06584340.1| ABC polar amino acid family transporter [Streptomyces roseosporus
           NRRL 15998]
 gi|291347897|gb|EFE74801.1| ABC polar amino acid family transporter [Streptomyces roseosporus
           NRRL 15998]
          Length = 213

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 22/218 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T+       + + VLG+V+++     SR              + T  +   P L
Sbjct: 17  LNGFKITLLATVLGTLVAAVLGLVVAMAGRAPSRFVTVPV-------RLVTEFVRSTPLL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +     L               +TV P ++ + + L  + AA+ +E+ R+G+  VP+G
Sbjct: 70  VQLVGAAALF--------------NTVEPLYIGIAV-LGIHYAAYTSEVYRAGIDGVPKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  AL L+ R+  + V+LPQA+R+++P L +  +++ K +     +   ++V     
Sbjct: 115 QWEACRALSLSPRRTWQAVILPQAVRNVLPALGNYAISMFKETPFLAVITVQEMVFEARK 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                    E+  +   I+L  S   +L M +L  ++ 
Sbjct: 175 YGADHFAYTEVFTLAGLIFLVASYPTSLLMRKLEKRLG 212



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T      G + A ++G +V     + ++ V    R+  E  R+ P LV +   
Sbjct: 16  LLNGFKITLLATVLGTLVAAVLGLVVAMAGRAPSRFVTVPVRLVTEFVRSTPLLVQLVGA 75

Query: 149 YKSVLSVLP 157
                +V P
Sbjct: 76  AALFNTVEP 84


>gi|227115307|ref|ZP_03828963.1| glutamine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 219

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P +V +   Y   F  P+      I  S     F
Sbjct: 42  FARAYGGWFSSRISLVFIE--IIRGTPIVVQVMFIY---FALPM------IFTSVRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+     R V+ P A+R ++PP
Sbjct: 91  AAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFILR 210

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 211 RLERRLKI 218


>gi|238897254|ref|YP_002922931.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465009|gb|ACQ66783.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 247

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 8/231 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYI 224
                     +T+  +    +FS +LGI L++       A R+    +    +  PLL  
Sbjct: 17  YIIWLWDGFLITLYISVCTVIFSTLLGIFLAVARESDFKAQRVMVTCYCMLFRNTPLLVQ 76

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F  FG   ++  +    L  + P      +      S EF+S  I L+ Y++AFIAE 
Sbjct: 77  LFFWYFGSGQILPSSWMQWL--NSPHELVIFYFTFHWPSFEFLSGLIGLTLYSSAFIAEE 134

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+  V  GQ  AA ALGLTH ++ + V+ PQA++  +PPL  QY+ ++KNSSL +A+
Sbjct: 135 FRAGIAGVGLGQKNAAQALGLTHWQSMKYVIFPQALKIALPPLLGQYMYIIKNSSLTMAI 194

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G A+L      +  +T +  +   +  F+Y+ L  +I  +    + ++  K
Sbjct: 195 GVAELSYASRQVETETLRTFQAFGVATFLYILLIALIEAWNTWHHQRVLRK 245



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 7/125 (5%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++    D+ Y   +  GF+ T +++   +I +T++G  +   R S  K    +   Y  +
Sbjct: 8   LIDEFLDTKYIIWLWDGFLITLYISVCTVIFSTLLGIFLAVARESDFKAQRVMVTCYCML 67

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRN P LV +FF Y     +LP            +LN+                   S +
Sbjct: 68  FRNTPLLVQLFFWYFGSGQILPSSWMQ-------WLNSPHELVIFYFTFHWPSFEFLSGL 120

Query: 196 LGIVL 200
           +G+ L
Sbjct: 121 IGLTL 125


>gi|84387892|ref|ZP_00990906.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84377238|gb|EAP94107.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 293

 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 108/262 (41%), Gaps = 16/262 (6%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
             +   +V                +  +   + +    +    ++ ++S VL +      
Sbjct: 25  WLYYRSAVGINYQWRWEDAFTLIFIPPSQGSIPYFFQGLIATLRLSLWSMVLALSFGTLL 84

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL------------- 251
             ++RH      K   L++I           V I   +  +   P+L             
Sbjct: 85  G-VARHSKIAFFKTPALIFIQLVRNIPPLVFVFIFYFFVSNQLIPLLGLESILREHNGEI 143

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              Q    G + +     S  I +   ++A+IAE++R+GL  +P+GQ EAA +LGL+   
Sbjct: 144 NAVQDFLFGPANLWENLASGVICIGLLSSAYIAEVIRAGLEGIPKGQWEAADSLGLSALS 203

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+ PQ + +I PPL  Q ++L+K++S+   +   ++  VG  + N +G   EI LI
Sbjct: 204 KYRFVVGPQVLTAITPPLAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWLI 263

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
             F+Y +L   ++     +  +
Sbjct: 264 VGFVYFALCFALSRLFKVIEQR 285



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 12/111 (10%)

Query: 32  ILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILV 91
           +L  ++ V   W          +S + +   +  E A       ++              
Sbjct: 14  VLLAVMCVFAGWLYY-------RSAVGINYQWRWEDA-----FTLIFIPPSQGSIPYFFQ 61

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           G + T  L+   M+ A   GTL+G  R S          +++++ RNIPPL
Sbjct: 62  GLIATLRLSLWSMVLALSFGTLLGVARHSKIAFFKTPALIFIQLVRNIPPL 112


>gi|330898557|gb|EGH29976.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 221

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+   A   V   VLG +L+L      R    K    +   Y++ F      ++
Sbjct: 14  WNGMVMTLKLMAMGVVGGLVLGTLLALM-----RLSSNKLLANVAGAYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 64  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 123 QMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 183 SGDIIGRANEFLIIAGLVYFTISFAASLVVKRLQKRFAV 221



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   ++GTL+   RLS+NKL+A +   YV  FR+IP L+VI + 
Sbjct: 13  LWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 73  YLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEI 111


>gi|330873261|gb|EGH07410.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 277

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYI-STFLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  + ++ + FG+ +      +      + +L
Sbjct: 69  GFLQGAALTLFVSVCSIVVSVLLGFVTALARLSNSAVAFGIASFYASFFRGTPLLIQILL 128

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 129 IYLGLPQLGIVPGAIAAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIF 188

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 189 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 248

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 249 VLYWIMSIGLELLQSRLEKHYG 270


>gi|271500964|ref|YP_003333989.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344519|gb|ACZ77284.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 219

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P +V +   Y   F  P+L        S     F
Sbjct: 42  FARVYGGWLSNRIALVFIE--IIRGTPIVVQVMFIY---FALPMLLT------SIRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 91  SAAVVTIMINSGAYIAEITRGSVLSIHKGFTEAGLALGLSRRDTLRHVIAPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAIIYLVITLVLSAVLR 210

Query: 387 RLNAKIAL 394
            L  ++ +
Sbjct: 211 WLETRLKI 218


>gi|237798755|ref|ZP_04587216.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331021608|gb|EGI01665.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 221

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+   A   V   VLG  L+L      R    K    +   Y++ F      ++
Sbjct: 14  WNGMVMTLKLMAMGVVGGLVLGTALALM-----RLSSNKLLANVAGAYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 64  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 123 QMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G+A E ++I   +Y ++S   ++ + RL  + A+
Sbjct: 183 SGDIIGRANEFLIIAGLVYFTISFAASVLVKRLQKRFAV 221



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   ++GT +   RLS+NKL+A +   YV  FR+IP L+VI + 
Sbjct: 13  LWNGMVMTLKLMAMGVVGGLVLGTALALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 73  YLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEI 111


>gi|194016403|ref|ZP_03055017.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
 gi|194011876|gb|EDW21444.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
          Length = 225

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 16/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V S  +G+ + LF   L +         +   YI  FL+ G P +V I + Y  
Sbjct: 29  LTLQLTVISIFIGMFIGLF-FALLKISRVAVFGYIANAYI--FLVRGTPLIVQIFILYFG 85

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             +  +             P+F +  IAL+ +  A+IAEI R  + ++ +GQ EA  +LG
Sbjct: 86  LTELNI-------------PDFWAASIALAFHNGAYIAEIFRGAIQSIDQGQKEAGRSLG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R ++LPQAMR  +PPL +Q++  LK+SSLA  +   +L +V  T  + +   +
Sbjct: 133 MGRFLTMRRIILPQAMRRALPPLGNQFIIGLKDSSLAAFISVNELFNVATTQGSNSFDNM 192

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L+    YL L +++   +     K+++ +
Sbjct: 193 TYLLVVAVYYLVLVLLLTFAVQTFEKKLSVSD 224



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G + T  L    +     IG      ++S   +  +I   Y+ + R  P +V IF L
Sbjct: 23  FLEGMLLTLQLTVISIFIGMFIGLFFALLKISRVAVFGYIANAYIFLVRGTPLIVQIFIL 82

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 83  YFGLTELNIP 92


>gi|123444360|ref|YP_001008325.1| ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122091321|emb|CAL14207.1| ABC transporter permease [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 245

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLS------LFATRLSRHFHEKTGKALPLLYISTF 227
                  LT+  +A   V S +LG +L+      L   +     +    +  PLL    F
Sbjct: 18  WLWHGFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFSIGYSTLFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             F     +  +    L  + P    F  +     S EF++ +I L+CY+ AFIAE +RS
Sbjct: 78  WYFAASQFLPASWIPWL--NTPHEITFFGLTLGWPSFEFLAGFIGLTCYSTAFIAEELRS 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V +GQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A
Sbjct: 136 GISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +  +   +   +Y+++  +I  +      +
Sbjct: 196 ELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQR 239



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 40/89 (44%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
               +     Y   +  GF+ T W++   ++ +T++G L+ A R S  K + W    Y  
Sbjct: 5   HFTDWLLAPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFSIGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +    LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQFLPASWIPW 93


>gi|330957764|gb|EGH58024.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 221

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+   A   V   +LG VL+L      R    K    +   Y++ F      ++
Sbjct: 14  WNGMVMTLKLMAMGVVGGLLLGTVLALM-----RLSSNKLLANVAGAYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 64  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 123 QMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G+A E ++I   +Y ++S   +L + RL  + A+
Sbjct: 183 SGDIIGRANEFLVIAGLVYFTISFAASLLVKRLQKRFAV 221



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   ++GT++   RLS+NKL+A +   YV  FR+IP L+VI + 
Sbjct: 13  LWNGMVMTLKLMAMGVVGGLLLGTVLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 73  YLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEI 111


>gi|310830296|ref|YP_003965396.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753202|gb|ADO44345.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 218

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 14/224 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   + F    +     + + +FV G +  +    L+R             +I  F   
Sbjct: 5   FSQADIFFIVSAIRWTLLLSLIAFVGGAIGGMLI-ALARTSRNVVLNRFARAFIEVF--Q 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + L Y           F            ++  +AL+ + +A++ EI R  + 
Sbjct: 62  GTPLLMQLFLVY-----------FGLAVVGLPINPLLAAAVALTLHASAYLGEIWRGAIE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EAA AL L++    R V+LPQAMR    P     + L+K +SLA  +GF +L 
Sbjct: 111 AVPQGQSEAATALSLSYPDRMRHVILPQAMRVATAPTVGFLVQLIKGTSLASIIGFTELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             G  + N T Q   +      +Y  L   ++L    + A++  
Sbjct: 171 RAGQIVNNATFQPFLVFGTVAALYFILCWPLSLLARHMEARMRR 214



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+     T  L+    +   I G L+   R S N ++    R ++EVF+  P L+ +F +
Sbjct: 13  IVSAIRWTLLLSLIAFVGGAIGGMLIALARTSRNVVLNRFARAFIEVFQGTPLLMQLFLV 72

Query: 149 YKSV 152
           Y  +
Sbjct: 73  YFGL 76


>gi|237807675|ref|YP_002892115.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237499936|gb|ACQ92529.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 231

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 91/226 (40%), Gaps = 5/226 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +           +   + +   S ++G+ +++    L R       +     YI 
Sbjct: 1   MFDFSIIAGEWPTYLEGLINTSWLVTVSLIIGLCIAVPVGIL-RSSQSALLRYPAWAYIY 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P LV + + Y        L Q            +    +A +  T A+ AEIV
Sbjct: 60  FF--RGTPLLVQLFIIYYGAGQWQWLQQ--SWAWEWFQEAWFCSLLAFALNTGAYTAEIV 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  +  +P+G++EAA + G++  +  R ++LP A+R  +P  +++ + +L  SS+A  + 
Sbjct: 116 RGSIQMIPKGELEAAASFGMSRWQMLRHIILPSALRRALPAYSNEVILMLHGSSIAGVIT 175

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             DL      I  +     E  +    +YL LS+M+      L   
Sbjct: 176 VVDLTGAARIINARYYTPFEAFITAGLLYLLLSLMLVWCFRHLERH 221



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 38/105 (36%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L G +NT WL    +I    I   VG  R S + L+ +    Y+  FR  P LV +
Sbjct: 11  WPTYLEGLINTSWLVTVSLIIGLCIAVPVGILRSSQSALLRYPAWAYIYFFRGTPLLVQL 70

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           F +Y        +        F        L+F   T    A+I 
Sbjct: 71  FIIYYGAGQWQWLQQSWAWEWFQEAWFCSLLAFALNTGAYTAEIV 115


>gi|220905022|ref|YP_002480334.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869321|gb|ACL49656.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 230

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 103/229 (44%), Gaps = 14/229 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              + +    L                S  +G+VL +    +++ +     + L  +Y+ 
Sbjct: 1   MDSLSVVYHALPSMLAGCIVTVGNVTISLAMGLVLGV-PMAVAQVYGGPWLRRLVAVYVW 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G+P LVL+ L Y L           FI     +  F+   + L C + A+ ++I 
Sbjct: 60  FF--RGVPILVLLFLCYGL-----------FISLGLPADPFLICCLVLGCTSTAYQSQIF 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + ++P+GQ+ AA ALG+        ++LPQAMR  IP   +++  LLK+S++   +G
Sbjct: 107 RGAIESLPQGQLNAARALGMGEGTGICSIILPQAMRLSIPGWANEFSILLKDSAICYVLG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             D+++    +  +T + + +      IY  L++ +   + RL  ++ +
Sbjct: 167 TQDIMARTSFVAARTHEHLALYAAAGCIYFLLTLAVLKLLRRLEKRVHV 215



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T       +    ++G  +   ++     +  +  VYV  FR +P LV++F  
Sbjct: 14  MLAGCIVTVGNVTISLAMGLVLGVPMAVAQVYGGPWLRRLVAVYVWFFRGVPILVLLFLC 73

Query: 149 YKSVLSV 155
           Y   +S+
Sbjct: 74  YGLFISL 80


>gi|188532409|ref|YP_001906206.1| Putative transport system permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188027451|emb|CAO95298.1| Putative transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 366

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 133/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G ++  G+ P+        A++VG ++         I    +  L   G   
Sbjct: 76  WVFIHARFG-QLMYGLYPHELRWRINLALIVGLLS---------IVPMFLKNLPRRGS-- 123

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  + PL+V   +Y  +L +  +                     T
Sbjct: 124 -----------YIIGWAVVYPLLVWLLMYGGLLGLERVETRQ-------------WGGLT 159

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +   G++L+L      R       + L +L+I  +    L T++ ++ 
Sbjct: 160 LTLIIAAVGIAGALPTGVLLAL-----GRRSQMPVVRTLCVLFIEFWRGVPLITVLFMS- 213

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   +   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 214 ---------SVMLPLFMAEGSSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 264

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 265 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 324

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 325 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEQRFHTGR 363


>gi|90410449|ref|ZP_01218465.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
 gi|90328690|gb|EAS44974.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
          Length = 229

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 11/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   +    +T+       +   VL ++ +      SR        A P     T L  
Sbjct: 6   YSMSLVEASWMTIQLAFTSLLVGLVLAVIFASGEMSRSR------LVAWPTTAFVTILRG 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV++ + +           F   G       F+S  +ALS   A++ A+ +R  L 
Sbjct: 60  LPEILVVLFIFFGSGQVL-----FMITGDYVDISPFVSGVVALSLIFASYAAQTIRGALK 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ EAA ALG++   +   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+
Sbjct: 115 AVNNGQREAASALGISKAHSFFRIILPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLL 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    T +A         IYL ++++    +  ++ K  ++
Sbjct: 175 KQAQLTSAATHEAFTWYATAAAIYLVITLITQRAVKVIDKKFTVQ 219


>gi|83595861|gb|ABC25223.1| general amino acid ABC transporter, permease protein [uncultured
           marine bacterium Ant4D3]
          Length = 369

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 18/255 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
            L  +++                 +         LT+       VFS  LGI+L+L    
Sbjct: 130 MLKFAMVYPFIGAWLLTGGFGLESVGTHLFGGLMLTLTIGVTGIVFSLPLGILLAL---- 185

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R  +    K   + +I       L TL+ +A     +F  P           T     
Sbjct: 186 -GRQSNLPIIKYFCIGFIEFIRGVPLITLLFVASTMLSYFLPP----------GTTFDLL 234

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M + I ++ + +A++AE++R GL A+P+GQ+EAA +LGL + +A R ++LPQA++  IP 
Sbjct: 235 MRVLIMVTLFASAYMAEVIRGGLQALPKGQLEAAESLGLNYGQAMRFIILPQALKISIPG 294

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIAL 383
           + + ++ L K+S+L + +G  D + +G   +  +   G + E+ L     +      +A 
Sbjct: 295 IVNTFIGLYKDSTLVIVIGLLDPLGIGRASVADSDWLGLSTEVYLFVAVFFFISCFGMAR 354

Query: 384 FMNRLNAKIALKEKK 398
           +   L  K+    K+
Sbjct: 355 YSLYLENKLNTGHKR 369



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 78/206 (37%), Gaps = 7/206 (3%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S  T +  G + T  +  +G++ +  +G L+  GR S   ++ + C  ++E  R +P L
Sbjct: 152 ESVGTHLFGGLMLTLTIGVTGIVFSLPLGILLALGRQSNLPIIKYFCIGFIEFIRGVP-L 210

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIV 199
           + + F+  ++LS    P  +  L   + +     +   +       +             
Sbjct: 211 ITLLFVASTMLSYFLPPGTTFDLLMRVLIMVTLFASAYMAEVIRGGLQALPKGQLEAAES 270

Query: 200 LSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           L L    A R              ++     L      +++I L   L   +  +   ++
Sbjct: 271 LGLNYGQAMRFIILPQALKISIPGIVNTFIGLYKDSTLVIVIGLLDPLGIGRASVADSDW 330

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIA 282
           +G ST    F++++  +SC+  A  +
Sbjct: 331 LGLSTEVYLFVAVFFFISCFGMARYS 356


>gi|89073557|ref|ZP_01160079.1| ABC-type arginine/histidine transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89050584|gb|EAR56070.1| ABC-type arginine/histidine transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 223

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N +        + T+ ++ V S ++G  L+L  T ++          L    I+ F   
Sbjct: 1   MNEQHFWQLMDGLATSLQLTVASLLVGCTLALLMT-MTLILRTPVLHWLSRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + + +F+      P F    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLIYYGPGQFEGIRE-SFVWQWLSQPWF-CAMLALALNTAAYSTQLFKGAFD 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ +A  ALG+   K T   LLP A+R  +P  +++ + + K +SLA  +   D++
Sbjct: 116 AIPKGQWQACRALGM-ETKTTLRTLLPFAIRRSVPAYSNEVILVFKGTSLASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I   +YL+++ ++++    +  K
Sbjct: 175 GYAQRINAQTYDTLTVFAIAGAMYLTVNALLSIVFRLIEKK 215



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  +   ++ G   +  L  + ++    +  L+    +    ++ W+ R  + +F   P 
Sbjct: 2   NEQHFWQLMDGLATSLQLTVASLLVGCTLALLMTMTLILRTPVLHWLSRGIITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I +  +            L+    T   + ++F  +F
Sbjct: 62  LVQIFLIYYGPGQFEGIRESFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|238024848|ref|YP_002909080.1| ABC-type amino acid transport system, permease [Burkholderia glumae
           BGR1]
 gi|237879513|gb|ACR31845.1| ABC-type amino acid transport system, permease component
           [Burkholderia glumae BGR1]
          Length = 216

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 13/183 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + L   YI  F   G P L+ + + +   F  P++            P +++
Sbjct: 42  RVSRHVALRGLVKCYIEVF--QGTPLLMQLFVVF---FGLPLV--------GLDVPPWLA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ +T+A++AEI R  + AVPRGQ EA+ +L +++ +  R V+LPQA R  + P  
Sbjct: 89  ATLGLTFFTSAYLAEIWRGCVEAVPRGQWEASASLAMSYLEQLRHVILPQAARIAVGPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              +  +K+++L   +GF +L   G  I N T +   +  +   IY +L   +  +   L
Sbjct: 149 GFGVQAIKDTALVSIIGFTELTKAGTMISNATFRPFLVYGLVALIYFALCYPLTRWARSL 208

Query: 389 NAK 391
             K
Sbjct: 209 QRK 211



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+    T  L+         +  L+ A R+S +  +  + + Y+EVF+  P L+ +F +
Sbjct: 13  LLLAARWTVQLSLVSFALGGTLALLLLALRVSRHVALRGLVKCYIEVFQGTPLLMQLFVV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  +  V       +    G+                 A
Sbjct: 73  FFGLPLVGLDVPPWLAATLGLTFFTSAYLAEIWRGCVEA 111


>gi|213854563|ref|ZP_03382803.1| glutamine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 147

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 79/130 (60%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  + +   + A+IAEI R  ++++ +G  EA +ALGL+ R+  R V+LP A+R ++
Sbjct: 17  PFSAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRETIRHVILPLALRRML 76

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPL +Q++  +K++SL + +G A+L   G  II    +A+EI       YL ++++++  
Sbjct: 77  PPLGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFI 136

Query: 385 MNRLNAKIAL 394
           + RL  ++ +
Sbjct: 137 LRRLERRMKI 146


>gi|229074426|ref|ZP_04207458.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-18]
 gi|228708710|gb|EEL60851.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-18]
          Length = 214

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +              K   +  I  F++  +  L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGILRY----------TKIPVVSQILGFIVEVIRNL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P  G    I          +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 66  PLLLIIFFTYFALPEAGLKLEI--------ITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ I    VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|15599388|ref|NP_252882.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|9950403|gb|AAG07580.1|AE004835_9 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
          Length = 234

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 96/183 (52%), Gaps = 8/183 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L +  T L+F +  + L+ + +  +F  P L           + +F ++ +AL
Sbjct: 52  RVSPWRWLRWPVTALVFVVRGVPLLMVIFWAYFFLPTLTG-------QRTDQFTTMLLAL 104

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             + A ++AEIVR+G+  + RGQ EAA +LGL +  + RLV+LPQA+R+++P L +Q+++
Sbjct: 105 VLFDAVYLAEIVRAGIQGLDRGQFEAARSLGLGYLASMRLVVLPQALRNMLPSLVNQFVS 164

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K +SL   +G A++  +   I  Q      ++ LI    Y  L   ++ F   L  + 
Sbjct: 165 TIKETSLGYIIGLAEVSFIASQINTQVFTLPTQVYLILGLTYFILCFGLSRFAFWLERRQ 224

Query: 393 ALK 395
           A +
Sbjct: 225 AQR 227


>gi|119383822|ref|YP_914878.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373589|gb|ABL69182.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 253

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 102/234 (43%), Gaps = 8/234 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G       LS    T+      +  +F +G+++ +      R    +       
Sbjct: 6   FQPAIDGQLYIQWLLSGLMWTLLLAVGGWWIAFAIGVLVGV-----GRTSRNRAVALAAR 60

Query: 222 LYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LY+  F    +P LV + L Y  L    P                F      L  YTAA 
Sbjct: 61  LYVEVF--RNIPVLVQMFLWYFVLPELLPTGLGDRIKQMPPPWGAFFPALACLGLYTAAR 118

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE VR+G+ A+P GQ EAA ALGL+   A R +++PQA+R I+P LTS+ + + KN+S+
Sbjct: 119 IAEQVRAGIEALPAGQDEAAAALGLSPWAARRHIIVPQALRLIVPSLTSEVMGIYKNTSV 178

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+ +G  +L +    I   T Q          IYL L+++    M  ++ +  +
Sbjct: 179 ALTIGLLELTAQARQISEATFQTFGAFAAATIIYLLLALVAYRLMLWIDRRFQI 232



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/80 (45%), Positives = 43/80 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P      Y   +L G + T  LA  G   A  IG LVG GR S N+ VA   R+YVEVFR
Sbjct: 8   PAIDGQLYIQWLLSGLMWTLLLAVGGWWIAFAIGVLVGVGRTSRNRAVALAARLYVEVFR 67

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
           NIP LV +F  Y  +  +LP
Sbjct: 68  NIPVLVQMFLWYFVLPELLP 87


>gi|304397040|ref|ZP_07378919.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355189|gb|EFM19557.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 238

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 12/236 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLL 222
              +            + V + + G+VL++                        + LP +
Sbjct: 1   MNEMMTLASAAGMTVGLAVCALIAGLVLAMIFAGWESLRLRPLAWIGTGLVTLIRGLPEI 60

Query: 223 YISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +  F+ FG   L+L ++  + L+F    L     I    VSP F+   IAL+   AA+ 
Sbjct: 61  LVVLFIYFGASQLLLTLSDGFTLNFGLFTLPVQMQIENFDVSP-FLCGVIALAMLYAAYA 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L 
Sbjct: 120 SQTLRGALKAVPVGQWESGQALGMKKSAIFLRLIMPQMWRHALPGLGNQWLVLLKDTALV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   DL+    +I  +T +     L+   IYL +++     + R+  +    E+
Sbjct: 180 SLISVNDLMLQTKSIATRTQEPFTWFLVAAAIYLVITLFSQAVLRRIELRTTRFER 235


>gi|171778131|ref|ZP_02919388.1| hypothetical protein STRINF_00223 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171283113|gb|EDT48537.1| hypothetical protein STRINF_00223 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 267

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 95/255 (37%), Gaps = 9/255 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++     +   L                      L     T+        F  +L +V +
Sbjct: 5   ILTTGLSWYDKLVEKIPEGQLFSWRAVFDAIPDLLGHLPTTLGLTLAGAFFGLILALVFA 64

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGG 259
           +      +  +       P+  +    + G P LV + L Y     F K +  ++ F   
Sbjct: 65  IVKINRPKVLY-------PIQAVFVSFLRGTPILVQLMLTYYGIPLFLKFLKLKYGFDWN 117

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P  +    A +   AA+ +E +R+ + AV  G++EAA +LG+T  +  R V++P A
Sbjct: 118 INAIPASVFAVTAFAFNEAAYTSETIRAAIQAVNVGEIEAARSLGMTSFQVYRRVIIPNA 177

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
                P L +  + L K +SLA   G  ++ +    +     +  E  +    +Y  +SI
Sbjct: 178 AVIATPTLINSLIGLTKGTSLAFNAGIVEIFAQAQILGGSDYRYFERYISVALVYWIISI 237

Query: 380 MIALFMNRLNAKIAL 394
           +I      +  K+ +
Sbjct: 238 IIEQIGRLIEKKMTI 252


>gi|117619256|ref|YP_856222.1| histidine ABC transporter, permease protein HisQ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560663|gb|ABK37611.1| histidine ABC transporter, permease protein HisQ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 246

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 79/212 (37%), Gaps = 22/212 (10%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--------------------QLH 245
            L++    K  +     Y  T +I G+P LVL+ L +                     L 
Sbjct: 37  ALAKLSPYKWARGFATAY--TTVIRGIPDLVLMMLLFFGGQVLINNLCTWVNESYNNYLL 94

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P     + +        F +    +     A++ E  R  ++AV +G++EAA A G+
Sbjct: 95  ASNPNQEWVSLLPDYIDISPFAAGVATIGFIFGAYMTETFRGAILAVDKGELEAARAFGM 154

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +    +L PQ MR  +P   + +L LLK ++L   +G  D+V         T     
Sbjct: 155 RATQVFVRILFPQMMRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKASLAAGSTQLPFT 214

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +    I+L  + +    +       A+K +
Sbjct: 215 FYMAVALIFLIFTAVSTSALKWAERHYAIKTR 246


>gi|209516020|ref|ZP_03264880.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503480|gb|EEA03476.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 237

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTF 227
           +    R   F      T   I ++  V+ I L    +           K L  L+++ T+
Sbjct: 5   IQQYWRNYLFSDGYRFTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLAGLVWLYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +   ++   N +  +          +A +  T A+  EI   
Sbjct: 65  IFRGTPLYVQLLLCYTGLYSLEIIRN-NELTNAFFRDGMHCTLLAFTLNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A      
Sbjct: 124 AIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ +   + + T Q+     I   +YL +S  +     R   +
Sbjct: 184 DILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAERR 227



 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y      G   T WL    +     +   +   R+S  K +A +  +
Sbjct: 5   IQQYWRNYLFSDGYR---FTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLAGLVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR  P  V +   Y  + S+  I ++ +   F     +  L   TL          
Sbjct: 62  YTYIFRGTPLYVQLLLCYTGLYSLEIIRNNELTNAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|254226032|ref|ZP_04919631.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125621415|gb|EAZ49750.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
          Length = 260

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------PVLGQFNF 256
             R     +    + +P L +   + FG   L+   L +   F         P      +
Sbjct: 60  WARAIATLYTTIIRGIPDLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVTY 119

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LL
Sbjct: 120 VPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILL 179

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  IP   + +L LLK ++L   +G  D+V +       T       +    I+L 
Sbjct: 180 PQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLF 239

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + +    +  L  K ++  +
Sbjct: 240 FTSVSTGLLKLLERKFSIHTR 260



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A ++G L    +++  +    I  +Y  + R IP LV+
Sbjct: 21  YEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVL 80

Query: 145 IFFLYKSVLS--------VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++                  +  +            +          A +    F+ 
Sbjct: 81  MMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVTYVPDYVDISPFVAGVLTIGFIF 140

Query: 197 GIVLS 201
           G  ++
Sbjct: 141 GAYMA 145


>gi|92114900|ref|YP_574828.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91797990|gb|ABE60129.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 238

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 7/193 (3%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTV 262
           ++    +    +  LY  T LI G+P LVL+ L +      ++     L     +     
Sbjct: 39  AKLSRHRLLHRIATLY--TTLIRGVPDLVLMLLLFFGGQMGVNAITDWLYYQFDVDIFIN 96

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
             EF++  + +     A++ E  R   +AV  GQ+EA  A G++ R   R +  PQ MR 
Sbjct: 97  INEFVAGVVTIGFIFGAYMGETFRGAFLAVDSGQLEAGRAYGMSSRLIFRRIQFPQMMRH 156

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L + ++ LLK ++L   +G +D+V +       T +    ++    IYL ++ +  
Sbjct: 157 ALPGLGNNWMVLLKTTALVSVIGLSDMVRIAAEATKATHEPFLFMIPVAVIYLLIASVSE 216

Query: 383 LFMNRLNAKIALK 395
             + RL  +  + 
Sbjct: 217 WGVARLQKRYNVG 229



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T  +A   ++ A ++G L  + +LS ++L+  I  +Y  + R +P LV+
Sbjct: 7   YGPRLLEGALVTVEVAVLSLLLALVLGLLTASAKLSRHRLLHRIATLYTTLIRGVPDLVL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +  L+      +      +   F + +            +  A +    F+ G  + 
Sbjct: 67  MLLLFFGGQMGVNAITDWLYYQFDVDI-------FININEFVAGVVTIGFIFGAYMG 116


>gi|50123002|ref|YP_052169.1| octopine transport system permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613528|emb|CAG76979.1| octopine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 242

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 4/215 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQ 243
               + +  F+LG  +       S+    +  + L   Y  T LI G+P L++I  L + 
Sbjct: 31  MTLALAICGFLLGAAIGTIG-AWSKICGNRPVRYLADGY--TTLIRGVPDLLIIYLLYFG 87

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +L +          P F++  +A+   + A   E+ R    AV +G++EAA A 
Sbjct: 88  GSSALTLLAKLFGSNEFFGFPGFLAGVLAVGISSGAQQTEVYRGAFYAVSKGEIEAAKAC 147

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      R +++P  +R  IPPL + +  +LK S+L    G A+L++   T    TG+ 
Sbjct: 148 GMPMLLRLRRIIVPLLLRHAIPPLGNVWQLVLKTSALVSVTGVAELMTQSQTGAGSTGKP 207

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +    +YL +SI     M R  +  +   K+
Sbjct: 208 FDFFMAAALLYLLISICSGWIMRRAESHYSRGVKR 242



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+G   T  LA  G +    IGT+    ++  N+ V ++   Y  + R +P L++
Sbjct: 21  WGKLLLIGAGMTLALAICGFLLGAAIGTIGAWSKICGNRPVRYLADGYTTLIRGVPDLLI 80

Query: 145 IFFLYKSVLSV 155
           I+ LY    S 
Sbjct: 81  IYLLYFGGSSA 91


>gi|107103710|ref|ZP_01367628.1| hypothetical protein PaerPA_01004781 [Pseudomonas aeruginosa PACS2]
 gi|218889478|ref|YP_002438342.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254237068|ref|ZP_04930391.1| hypothetical protein PACG_03105 [Pseudomonas aeruginosa C3719]
 gi|254242875|ref|ZP_04936197.1| hypothetical protein PA2G_03644 [Pseudomonas aeruginosa 2192]
 gi|126168999|gb|EAZ54510.1| hypothetical protein PACG_03105 [Pseudomonas aeruginosa C3719]
 gi|126196253|gb|EAZ60316.1| hypothetical protein PA2G_03644 [Pseudomonas aeruginosa 2192]
 gi|218769701|emb|CAW25461.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 234

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 96/183 (52%), Gaps = 8/183 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L +  T L+F +  + L+ + +  +F  P L           + +F ++ +AL
Sbjct: 52  RVSPWRWLRWPITALVFVVRGVPLLMVIFWAYFFLPTLTG-------QRTDQFTTMLLAL 104

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             + A ++AEIVR+G+  + RGQ EAA +LGL +  + RLV+LPQA+R+++P L +Q+++
Sbjct: 105 VLFDAVYLAEIVRAGIQGLDRGQFEAARSLGLGYLASMRLVILPQALRNMLPSLVNQFVS 164

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K +SL   +G A++  +   I  Q      ++ LI    Y  L   ++ F   L  + 
Sbjct: 165 TIKETSLGYIIGLAEVSFIASQINTQVFTLPTQVYLILGLTYFILCFGLSRFAFWLERRQ 224

Query: 393 ALK 395
           A +
Sbjct: 225 AQR 227


>gi|50121693|ref|YP_050860.1| glutamine ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612219|emb|CAG75669.1| glutamine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 219

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P +V +   Y   F  P+      I  S     F
Sbjct: 42  FARAYGGWFSSRISLVFIE--IIRGTPIVVQVMFIY---FALPM------IFTSVRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+     R V+ P A+R ++PP
Sbjct: 91  AAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLVLSFILR 210

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 211 RLERRLKI 218


>gi|332111813|gb|EGJ11793.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 221

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/235 (23%), Positives = 114/235 (48%), Gaps = 15/235 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F  F  +    F    +  + ++ + + + GI+L      L R   +         
Sbjct: 1   MNLDFSFFSADVISGFIVKGLLFSLQLTLVAMIGGIILGTLL-ALMRLSGKPWLVTPAAA 59

Query: 223 YISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y++T     L   ++   L   L   KP+  +             +S ++  + + AA+ 
Sbjct: 60  YVNTMRSIPLVMVILWFFLLIPLLLGKPMGAE-------------LSAFVTFTLFEAAYY 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +VP+GQ+ A  A+G+++R+  +LV+LPQA R+++P L +Q + L +++SL 
Sbjct: 107 SEIMRAGIQSVPKGQVYAGYAMGMSYRQTMQLVVLPQAFRNMLPVLLTQTIILFQDTSLV 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+G  DL+           + +E  L+   +Y  +   +++ + RL A+IA+  
Sbjct: 167 YAIGAYDLLKGFEIAGKNFNRPVETYLVAAVVYFVICFGLSMLVRRLQARIAIIR 221



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 73/204 (35%), Gaps = 8/204 (3%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + S    +  I+ G + +  L    MI   I+GTL+   RLS    +      YV   R+
Sbjct: 7   FFSADVISGFIVKGLLFSLQLTLVAMIGGIILGTLLALMRLSGKPWLVTPAAAYVNTMRS 66

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP ++VI + +  +  +L  P  + +  F  F       +  +       +       G 
Sbjct: 67  IPLVMVILWFFLLIPLLLGKPMGAELSAFVTFTLFEAAYYSEIMRAGIQSVPKGQVYAGY 126

Query: 199 VLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            + +   +  +     +     LP+L   T ++F   +LV     Y L      L  F  
Sbjct: 127 AMGMSYRQTMQLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDL------LKGFEI 180

Query: 257 IGGSTVSPEFMSLYIALSCYTAAF 280
            G +   P    L  A+  +   F
Sbjct: 181 AGKNFNRPVETYLVAAVVYFVICF 204


>gi|325125285|gb|ADY84615.1| Glutamine ABC transporter permease component [Lactobacillus
           delbrueckii subsp. bulgaricus 2038]
          Length = 222

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 15/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + SFV+G+ L L           +  K + +      +I  +  L
Sbjct: 17  LQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGV------IIDIIRNL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  PV+              F +  IA+  + +A IAE+VR+G++AV  G
Sbjct: 71  PLLLIIFFSYFGLPVM--------GIRVDAFQASVIAMVVFESAMIAEVVRTGIMAVDPG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + G+T+ +A   V+ PQA+  +IP L SQ+++L+K++SLA  +   +L+     
Sbjct: 123 QMEGARSNGMTYMQAMTHVVFPQALSKMIPALLSQFVSLIKDTSLATIIVLPELLYHAEI 182

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I NQ  +  I + L    +Y  +   ++ F N L+ +I 
Sbjct: 183 IYNQNTKYMIPMYLAVAVMYFIICFALSSFANYLSKRIK 221



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----VAWICRVYVEVFR 137
                  +L GF  T  ++   +I + +IG  +G  R +        ++ +  V +++ R
Sbjct: 9   SWINLRFLLQGFWVTIEVSVISIILSFVIGLALGLIRFTRIDAKTTRISKVVGVIIDIIR 68

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSI 163
           N+P L++IFF Y  +  +    D   
Sbjct: 69  NLPLLLIIFFSYFGLPVMGIRVDAFQ 94


>gi|312867877|ref|ZP_07728082.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096632|gb|EFQ54871.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 266

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 100/253 (39%), Gaps = 9/253 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V+   + +             L   +      +    +T+        F  +  ++ +L 
Sbjct: 6   VLTANWYADFLKHVPDSKLFSLRAVLDAFPAVIGKLPVTILLALGGAFFGIIFAMIFALV 65

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGST 261
                R  +       P+  +    + G P LV + L Y       K +   +       
Sbjct: 66  KINRVRILY-------PIQAVFVSFLRGTPLLVQLMLTYYGIPLILKAINQSYGTAFNIN 118

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P  +   +AL+   AA+ +E +R+ +++V  G++EAA +LG+T+R+  R +++P A  
Sbjct: 119 AIPAELFAIVALAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNRQVYRRIIIPNAAV 178

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              P L +  + L K +SLA +    ++ +    I     +  E  +    +Y  ++I+I
Sbjct: 179 VATPTLINSLIGLTKGTSLAFSASVVEIFAQARIIGGSDLKYFERFITVSIVYWIVNILI 238

Query: 382 ALFMNRLNAKIAL 394
            +    +  ++ +
Sbjct: 239 EILGRHIERRLDI 251


>gi|295675884|ref|YP_003604408.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295435727|gb|ADG14897.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 237

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTF 227
           +    R   F      T   I ++  V+ I L    +           K L  L+++ T+
Sbjct: 5   IQQYWRNYLFTDGYRFTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLAGLVWLYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +   ++   N +  +          +A +  T A+  EI   
Sbjct: 65  IFRGTPLYVQLLLCYTGLYSLEIIRN-NELTNAFFRDGMNCTLLAFTLNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A      
Sbjct: 124 AIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ +   + + T Q+     I   +YL +S  +     R   +
Sbjct: 184 DILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAERR 227



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y      G   T WL    +     +   +   R+S  K +A +  +
Sbjct: 5   IQQYWRNYLFTDGYR---FTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLAGLVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR  P  V +   Y  + S+  I ++ +   F     N  L   TL          
Sbjct: 62  YTYIFRGTPLYVQLLLCYTGLYSLEIIRNNELTNAFFRDGMNCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|330505355|ref|YP_004382224.1| putative permease of ABC transporter [Pseudomonas mendocina NK-01]
 gi|328919641|gb|AEB60472.1| putative permease of ABC transporter [Pseudomonas mendocina NK-01]
          Length = 221

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R  H K    +   Y++ F      ++ L+ +    +F  P + ++   G  T    
Sbjct: 39  ALMRLSHSKLLSNIAATYVNYFR-----SIPLLLVITWFYFAVPFILRW-ITGEDTPVGA 92

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +A   + AA+  EIVR+G+ A+P+GQM AA ALG+T+ ++ RL++LPQA R + P
Sbjct: 93  FSSCLVAFVMFEAAYFCEIVRAGIQAIPKGQMGAASALGMTYGQSMRLIILPQAFRKMTP 152

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L  Q + L +++SL   VG  D ++   +  +  GQ  E ++    +Y ++S   +  +
Sbjct: 153 LLLQQSIILFQDTSLVYTVGLMDFLNAARSRGDIIGQPHEFLIFAGLVYFTVSFAASRLV 212

Query: 386 NRLNAKIAL 394
             L  ++A+
Sbjct: 213 KLLQKRLAV 221



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 40/99 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L   G++   ++GTL+   RLS +KL++ I   YV  FR+IP L+VI + 
Sbjct: 13  LWDGMLVTLQLMVLGVLGGVVLGTLLALMRLSHSKLLSNIAATYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  +L                               
Sbjct: 73  YFAVPFILRWITGEDTPVGAFSSCLVAFVMFEAAYFCEI 111


>gi|167579226|ref|ZP_02372100.1| glutamine ABC transporter permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 218

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 11/227 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
           M  +   +      +    ++ VF    G+        ++  F      AL +L      
Sbjct: 1   MQFDWSAIWAALPDLTDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAALNVLTQVYIE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G P +V +     L+F  P+L      G         +  +A++  + A++AE+VR 
Sbjct: 61  LIRGTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAYLAEVVRG 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L+++P+G  EA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +G  
Sbjct: 111 ALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVIGVG 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L   G  II    QA+EI      IYL+L+ ++ L +  +  ++ +
Sbjct: 171 ELTRKGQEIIAGNFQAVEIWTAVAAIYLALTGVMTLTLRFVEKRMRI 217


>gi|167567070|ref|ZP_02359986.1| glutamine ABC transporter permease protein [Burkholderia
           oklahomensis EO147]
 gi|167574147|ref|ZP_02367021.1| glutamine ABC transporter permease protein [Burkholderia
           oklahomensis C6786]
          Length = 218

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I  F    G ++ + A  + R +       L  +YI
Sbjct: 1   MQFDWSAIWAALPDLMDGVKLTVFIAFFGLAGGFLVGMVAG-MFRAYGPAALNVLAQVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +     L+F  P+L      G         +  +A++  + A++AE+
Sbjct: 60  E--LIRGTPIVVQVMF---LYFALPLLAHIRIDG-------LTAAIVAITLNSGAYLAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++P+G  EA +A+GL+  +    ++ P A R +IPPL +Q +  LK++SL + +
Sbjct: 108 VRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIPPLGNQCIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  II    QA+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 168 GVGELTRKGQEIIAGNFQAVEIWSAVAAIYLVLTGVMTLTLRFVERRMRI 217


>gi|163856320|ref|YP_001630618.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii DSM 12804]
 gi|163260048|emb|CAP42349.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii]
          Length = 217

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 13/193 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L R    K     PL   S  +I  L  + +I L + ++F  P +           
Sbjct: 38  MVWALMRVSGIK-----PLAKFSAGMINVLRGIPIIVLLFYIYFVMPDM--------GIA 84

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  I L    +A+ AE  R+G+ A+ RGQ+EAA+A+G++     R V+LPQA++ 
Sbjct: 85  LTAVQAAIIGLGIAYSAYQAENFRAGIEAIDRGQVEAAMAMGMSWSMTMRRVVLPQAVKI 144

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PP  +  + +LK+SS A  +  A+L   G  I   T +   +  +   +YL + + + 
Sbjct: 145 VLPPYGNIMIMMLKDSSQASTITVAELALQGKLIAVSTFKNATVFSLVALMYLVMCVPLI 204

Query: 383 LFMNRLNAKIALK 395
           LF+  L  + A K
Sbjct: 205 LFVRHLEKRSAAK 217


>gi|28872470|ref|NP_795089.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855725|gb|AAO58784.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 231

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 3/181 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +            +     F +  
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNGMRALGELLGIPNLALSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++  + M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEK 220

Query: 391 K 391
            
Sbjct: 221 H 221


>gi|262165970|ref|ZP_06033707.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           mimicus VM223]
 gi|262025686|gb|EEY44354.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           mimicus VM223]
          Length = 246

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 89/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------------- 248
               L++    +  + +  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARWIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNGLSSVNEFLNQ 91

Query: 249 ------PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFTERDPNHEWVSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  IP   + +L LLK ++L   +G  D+V +       T  
Sbjct: 152 YGMSSSMSFRRILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  + ++  +
Sbjct: 212 PFTFYMAVAIIFLFFTSVSTGLLKLIERRFSIHTR 246



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A ++G L    +++  +   WI  +Y  + R IP LV+
Sbjct: 7   YEASIAKGALVTIEVALLSLLLAVVLGMLGALAKMAPYRWARWIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYK--------SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + SV    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNGLSSVNEFLNQWFTERDPNHEWVSYLPDYIDVSPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|261823279|ref|YP_003261385.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607292|gb|ACX89778.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 238

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 100/241 (41%), Gaps = 4/241 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +         F  +       +       + +  F+LG V+       S+    +  + 
Sbjct: 1   MEDISFWQLISFGEHGWGKLLLIGAGMTIALAIGGFLLGAVIGTIG-AWSKICGNRPVRY 59

Query: 219 LPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           L   Y  T LI G+P L++I  L +       +L +          P F++  +A+   +
Sbjct: 60  LADGY--TTLIRGVPDLLIIYLLYFGGSSALTLLAKLFGSNEFFGFPGFLAGVLAVGISS 117

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A   E+ R    AV +G++EAA A G+      R +++P  +R  IPPL + +  +LK 
Sbjct: 118 GAQQTEVYRGAFYAVSKGEIEAAKACGMPTLLRLRRIIIPLLLRHAIPPLGNVWQLVLKT 177

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           S+L    G A+L++   T    TG+  +  +    +YL +SI     M R  +  +   K
Sbjct: 178 SALVSVTGVAELMTQSQTGAGSTGKPFDFFMAAALLYLLISICSGWIMRRAESHYSRGVK 237

Query: 398 K 398
           +
Sbjct: 238 R 238


>gi|86147679|ref|ZP_01065987.1| arginine ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218709552|ref|YP_002417173.1| arginine transporter permease subunit ArtQ [Vibrio splendidus
           LGP32]
 gi|85834460|gb|EAQ52610.1| arginine ABC transporter, permease protein [Vibrio sp. MED222]
 gi|218322571|emb|CAV18730.1| ABC transporter: transmembrane protein; Arginine uptake [Vibrio
           splendidus LGP32]
          Length = 228

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 1/179 (0%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + + + + +T  +  +  L  I +   ++F       F   G       F+S  +ALS  
Sbjct: 42  RRIAIKWPTTAFVTIVRGLPEILVVLFIYFGS-TQVLFMITGDFIEVSPFLSGVVALSLI 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            A++ ++ +R  L AV +GQ EAA ALG++  +A   V+LPQA+R  +P LT+Q+L LLK
Sbjct: 101 FASYASQTIRGALKAVSKGQREAASALGISQSRAFFRVVLPQAVRHALPGLTNQWLVLLK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++L   +G  DL+         T +A         IYL ++++    +  ++ K +++
Sbjct: 161 DTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLITQRLVKVIDGKFSIQ 219


>gi|294101060|ref|YP_003552918.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616040|gb|ADE56194.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 223

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 14/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +F+    L      +    K+ V S   GI        + R +   T   L  LY+
Sbjct: 1   MNDLLFIQQDVLPALLTGIIMTLKLIVVSIPFGIAAGTVI-AIGRVYGNNTISFLCRLYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F         L+ L + L+F  P         G T+SP F +  +       A+ +E 
Sbjct: 60  IFFKGTP-----LLILLFMLYFGLPSF-------GITLSP-FAASVLGFIICNGAYNSEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  + +V  GQ+ AA ALG+T  +A   ++LPQA R  IP  +++ + L+K SSLA  +
Sbjct: 107 IRGAIQSVKGGQLIAAQALGMTKWQAILNIILPQAFRRAIPGCSNEMIYLIKYSSLAYML 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + +L   G  + +++ +   +  +   IYL +  + +  ++ L  K+
Sbjct: 167 TYIELTGAGKIVASRSFRYTLVFTVVGVIYLIMVTLASWLLSLLEKKL 214



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 1/158 (0%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G + T  L    +      GT++  GR+  N  ++++CR+YV  F+  P L+++F 
Sbjct: 14  ALLTGIIMTLKLIVVSIPFGIAAGTVIAIGRVYGNNTISFLCRLYVIFFKGTPLLILLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN-AKIFVFSFVLGIVLSLFATR 206
           LY  + S             G  + N   +   +       K         + ++ +   
Sbjct: 74  LYFGLPSFGITLSPFAASVLGFIICNGAYNSEYIRGAIQSVKGGQLIAAQALGMTKWQAI 133

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           L+    +   +A+P        +    +L  +    +L
Sbjct: 134 LNIILPQAFRRAIPGCSNEMIYLIKYSSLAYMLTYIEL 171


>gi|229056417|ref|ZP_04195830.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
 gi|228720891|gb|EEL72440.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH603]
          Length = 214

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQILGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  L+  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFILNYSLSILSRRLELR 214



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|163844812|ref|YP_001622467.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163675535|gb|ABY39645.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 226

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 13/188 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R F      ++   Y+  F   G P LV + + +                       F 
Sbjct: 44  VRLFAPVWLSSVARFYVWIF--RGTPLLVQLFVIFY-----------GLPSIGIYLDAFP 90

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I  +    A+ +EI+R+ + +VP+GQ EAA ++G++ R+A    +LPQA R+ +PPL
Sbjct: 91  AALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWRQALIRTILPQATRTAVPPL 150

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +++L+K++SLA A+   +L      I+  T + + + +    IYL+LS ++     R
Sbjct: 151 SNTFISLIKDTSLAAAITVPELFQSAQRIVATTYEPLILYIEAALIYLALSSILLALQVR 210

Query: 388 LNAKIALK 395
           L  +    
Sbjct: 211 LERRFGRY 218



 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  T +  G + T  L          +G L    RL A   ++ + R YV +FR  P 
Sbjct: 9   ADSLPTLLWAGLIFTIPLTLLSFTFGLALGLLTALVRLFAPVWLSSVARFYVWIFRGTPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           LV +F ++  + S+    D       G  LN
Sbjct: 69  LVQLFVIFYGLPSIGIYLDAFPAALIGFTLN 99


>gi|30260796|ref|NP_843173.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47525921|ref|YP_017270.1| amino acid ABC transporter permease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183634|ref|YP_026886.1| amino acid ABC transporter permease [Bacillus anthracis str.
           Sterne]
 gi|49480225|ref|YP_034900.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|65318068|ref|ZP_00391027.1| COG0765: ABC-type amino acid transport system, permease component
           [Bacillus anthracis str. A2012]
 gi|165872943|ref|ZP_02217566.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167635139|ref|ZP_02393455.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|167640927|ref|ZP_02399185.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|170689042|ref|ZP_02880242.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|170708502|ref|ZP_02898944.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|177652796|ref|ZP_02935169.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190568586|ref|ZP_03021492.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196041862|ref|ZP_03109151.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|227816488|ref|YP_002816497.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|229599982|ref|YP_002865240.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
 gi|254684281|ref|ZP_05148141.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CNEVA-9066]
 gi|254722085|ref|ZP_05183874.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A1055]
 gi|254738745|ref|ZP_05196448.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Western North America USA6153]
 gi|254742043|ref|ZP_05199730.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Kruger B]
 gi|254754971|ref|ZP_05207005.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Vollum]
 gi|254762298|ref|ZP_05214142.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Australia 94]
 gi|30254245|gb|AAP24659.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Ames]
 gi|47501069|gb|AAT29745.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177561|gb|AAT52937.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. Sterne]
 gi|49331781|gb|AAT62427.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|164711297|gb|EDR16851.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0488]
 gi|167511147|gb|EDR86535.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0193]
 gi|167529398|gb|EDR92149.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0442]
 gi|170126623|gb|EDS95508.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0389]
 gi|170667027|gb|EDT17790.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0465]
 gi|172081830|gb|EDT66899.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0174]
 gi|190560380|gb|EDV14359.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|196027356|gb|EDX65974.1| amino acid ABC transporter, permease protein [Bacillus cereus
           NVH0597-99]
 gi|227005796|gb|ACP15539.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. CDC 684]
 gi|229264390|gb|ACQ46027.1| amino acid ABC transporter, permease protein [Bacillus anthracis
           str. A0248]
          Length = 214

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 63/217 (29%), Positives = 111/217 (51%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|327184148|gb|AEA32595.1| amino acid ABC transporter permease [Lactobacillus amylovorus GRL
           1118]
          Length = 215

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 15/218 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            IF ++ +L   L +    L      K  K +   Y+  +++ G P L
Sbjct: 10  LPALFSGAGMTLSIFFWTLILATPLGILV-SLGEMSKIKPLKWIVNFYV--WIMRGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V P + +   A     AA+ AEI R G  ++ +G
Sbjct: 67  LQLIFVF---YGLPIIH--------IVFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDQG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +    +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 116 QFEAAQVLHLNRWQTMTKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNV 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + +    +  +++   IYL L  + A  + RL    +
Sbjct: 176 AMARD-VTLVPLVLVGVIYLFLISICAFILKRLEKHFS 212



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+  G   T  + F  +I AT +G LV  G +S  K + WI   YV + R  P L+ 
Sbjct: 9   ILPALFSGAGMTLSIFFWTLILATPLGILVSLGEMSKIKPLKWIVNFYVWIMRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F++  +  +  +        F   LN              + 
Sbjct: 69  LIFVFYGLPIIHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQSI 112


>gi|261820368|ref|YP_003258474.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261604381|gb|ACX86867.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 249

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 3/230 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F +F N          +    ++ V+S  LG +L  F    +R  + +  + L   Y+
Sbjct: 18  WNFSVFYNAWEAQKYLTGLTLAVELAVWSL-LGSMLIGFLCVFARQSNLRPLRWLVTAYV 76

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F     P L  +   +        L  +   G   +   F  + IALS    AF+AEI
Sbjct: 77  ELF--RNTPGLAQLYFLFFGIGSYFHLSTYGQNGELPLVSPFQFVVIALSLQYGAFVAEI 134

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AVPR  +EAA +LG    +A   ++LP A R+ +P L +    ++K+++LA A+
Sbjct: 135 LRAGIEAVPRTTVEAAESLGYNRPRAMIHIILPLAFRTSLPALGNNMAQIVKSTALAYAI 194

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              + + V   I  +    +E++ + +  YL L  +  L +  L   + +
Sbjct: 195 AVPEALYVAHEIWTEHFNVLEMMNVVLLSYLGLMGIFTLLVKLLERWLKV 244



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 5/136 (3%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           ++ G   L E+ G+        +      A   L G      LA   ++ + +IG L   
Sbjct: 5   IADGFKALYEQTGWNFSVFYNAWE-----AQKYLTGLTLAVELAVWSLLGSMLIGFLCVF 59

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            R S  + + W+   YVE+FRN P L  ++FL+  + S   +  +       +    + +
Sbjct: 60  ARQSNLRPLRWLVTAYVELFRNTPGLAQLYFLFFGIGSYFHLSTYGQNGELPLVSPFQFV 119

Query: 177 SFPTLTMDTNAKIFVF 192
                         + 
Sbjct: 120 VIALSLQYGAFVAEIL 135


>gi|261340700|ref|ZP_05968558.1| histidine transport system permease protein HisM [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317116|gb|EFC56054.1| histidine transport system permease protein HisM [Enterobacter
           cancerogenus ATCC 35316]
          Length = 238

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++F   + R  + K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLISSVVMGGILAIFL-AIGRVSNNKYIRFP--IWLFTYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++     +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEML-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 YGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227



 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 7/93 (7%)

Query: 83  SSYATAIL-------VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             Y  A+L        G   T WL  S ++   I+   +  GR+S NK + +   ++  V
Sbjct: 6   QEYWKALLWTDGYRFTGVAITLWLLISSVVMGGILAIFLAIGRVSNNKYIRFPIWLFTYV 65

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           FR  P  V +   Y  + ++  +    ++  F 
Sbjct: 66  FRGTPLYVQLLVFYSGMYTLEIVKGTEMLNAFF 98


>gi|238757266|ref|ZP_04618453.1| Glutamine transport system permease protein glnP [Yersinia aldovae
           ATCC 35236]
 gi|238704644|gb|EEP97174.1| Glutamine transport system permease protein glnP [Yersinia aldovae
           ATCC 35236]
          Length = 218

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +     + + L++I   LI G P +V +   Y   F  P++               
Sbjct: 42  FARAYGGWLSRNIALVFIE--LIRGTPIVVQVMFIY---FALPMMMPMRI-------DPL 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R   R V+ P A+R ++PP
Sbjct: 90  TAAIVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSKRDTLRYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 40/81 (49%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       +L G   T W++  G++   IIG + G  R     L   I  V++E+ R
Sbjct: 4   EWSAIWPAIPILLEGAKLTLWISVLGLLGGLIIGVVAGFARAYGGWLSRNIALVFIELIR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
             P +V + F+Y ++  ++P+
Sbjct: 64  GTPIVVQVMFIYFALPMMMPM 84


>gi|254464309|ref|ZP_05077720.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
 gi|206685217|gb|EDZ45699.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
          Length = 432

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 19/228 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R L    L +         S  LGI L+L      R       K + +++I       L 
Sbjct: 220 RDLGGFMLNLMLGVTCVSLSLPLGIALAL-----GRQSDMPLIKWMCVIFIEFVRGVPLI 274

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           +    F+ + I ++ ++AA+IAE++R GL A+P
Sbjct: 275 TLLFVASVMLAYFFPPE----------STVDLFLRVVIMITMFSAAYIAEVIRGGLAALP 324

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VS 351
           +GQ EAA +LGL + +A RL++LPQA++  IP + +  + L K+++L   +   DL  + 
Sbjct: 325 KGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGMI 384

Query: 352 VGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            G  + +    G   E++     ++  +   I+ +   L  ++A   +
Sbjct: 385 RGPILASTEWNGVYWELLGFAALLFFVVCYGISQYSQWLERRLATDHR 432


>gi|229095294|ref|ZP_04226286.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-29]
 gi|229101402|ref|ZP_04232146.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-28]
 gi|229114243|ref|ZP_04243664.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-3]
 gi|228669263|gb|EEL24684.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock1-3]
 gi|228682107|gb|EEL36240.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-28]
 gi|228688153|gb|EEL42039.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock3-29]
          Length = 214

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYTKIPVVSQILGVIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ I  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQILGVIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|227325924|ref|ZP_03829948.1| glutamine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 219

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P +V +   Y   F  P+      I  S     F
Sbjct: 42  FARAYGGWFSSRISLVFIE--IIRGTPIVVQVMFIY---FALPM------IFTSVRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+     R V+ P A+R ++PP
Sbjct: 91  AAAVVTIMINSGAYIAEITRGSVLSIHNGFREAGLALGLSRSATLRHVIAPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRSGQEIIAGNFRALEIWTAVAIIYLCITLILSFILR 210

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 211 RLERRLKI 218


>gi|157694048|ref|YP_001488510.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157682806|gb|ABV63950.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 225

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 16/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V S  +G+ + LF   L +         +   YI  FL+ G P +V I + Y  
Sbjct: 29  LTLQLTVISIFIGMFIGLF-FALLKISRVAVFGYIANAYI--FLVRGTPLIVQIFILYFG 85

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             +  +             P+F +  IAL+ +  A+IAEI R  + ++ +GQ EA  +LG
Sbjct: 86  LTELNI-------------PDFWAASIALAFHNGAYIAEIFRGAIQSIDQGQKEAGRSLG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R ++LPQAMR  +PPL +Q++  LK+SSLA  +   +L +V  T  + +   +
Sbjct: 133 MGRFLTMRRIILPQAMRRALPPLGNQFIIGLKDSSLAAFISVNELFNVATTQGSNSFDNM 192

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L+    YL L +++   +     K+++ +
Sbjct: 193 TYLLVVAVYYLVLVLLLTFAVQTFEKKLSVSD 224



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G + T  L    +     IG      ++S   +  +I   Y+ + R  P +V IF L
Sbjct: 23  FLEGMLLTLQLTVISIFIGMFIGLFFALLKISRVAVFGYIANAYIFLVRGTPLIVQIFIL 82

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 83  YFGLTELNIP 92


>gi|295697138|ref|YP_003590376.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295412740|gb|ADG07232.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 219

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 101/229 (44%), Gaps = 18/229 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
                      L    +T++      +   V+G VL+       R       +A+  +Y+
Sbjct: 5   FELWQRYGESFLHGMLVTLELTVASLIVGLVVGGVLAFM-----RMSRIAPLRAIGAVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++   P +V +   Y            +      + P F +  I L  +  A  +EI
Sbjct: 60  E--IVRSTPVIVELFFVYY-----------SLAQIGIIIPGFEAAVIVLGGFYGALYSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSGL++V  GQ EAA ALGL  +     V++PQ++ +I+PP TS  ++L+K+++L + +
Sbjct: 107 FRSGLMSVDFGQREAAEALGLRRKTTLLRVIVPQSLLAILPPGTSAAIDLVKDTALVITI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +L+       ++T Q + + LI   +Y  +   ++L + R    + 
Sbjct: 167 GVGELMYQAYQAGSETFQYMNVFLIAGVLYFIVCYGLSLAVRRWERHVK 215



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 43/108 (39%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y  + L G + T  L  + +I   ++G ++   R+S    +  I  VYVE+ R+ P +
Sbjct: 9   QRYGESFLHGMLVTLELTVASLIVGLVVGGVLAFMRMSRIAPLRAIGAVYVEIVRSTPVI 68

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           V +FF+Y S+  +  I          +      L          +  F
Sbjct: 69  VELFFVYYSLAQIGIIIPGFEAAVIVLGGFYGALYSEIFRSGLMSVDF 116


>gi|134294748|ref|YP_001118483.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134137905|gb|ABO53648.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia vietnamiensis
           G4]
          Length = 246

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGVFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              AL  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLAALGTVYVSIF--RNIPLIVQFFVWYLVVPELLPASIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMAFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/81 (33%), Positives = 42/81 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++ GF  T  ++    + A I+G+L G  R   NK +A +  VYV +FRNIP +V
Sbjct: 21  TYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAALGTVYVSIFRNIPLIV 80

Query: 144 VIFFLYKSVLSVLPIPDHSIV 164
             F  Y  V  +LP    + +
Sbjct: 81  QFFVWYLVVPELLPASIGTWI 101


>gi|312173030|emb|CBX81285.1| Histidine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 238

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + V S  LG  ++L    ++R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFSGVAVTLWLLVVSVGLGGCMALLL-SIARVSPYKAIRF--PVWLFTYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   V+     +  +          +AL+  T A+  E+    + AVP
Sbjct: 71  LYVQLLVFYSGMYTLEVVKGTELL-NAFFRSGLNCTLLALTLNTCAYTTEVFAGAIRAVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R +++P A+R+ +P  +++ + +L +++LA      DL+ V 
Sbjct: 130 HGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      +   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFIAFSLAAVLYLIISYVLISLFRKAEKR 227


>gi|300690980|ref|YP_003751975.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Ralstonia solanacearum PSI07]
 gi|299078040|emb|CBJ50682.1| glutamine transporter subunit ; membrane component of ABC
           superfamily [Ralstonia solanacearum PSI07]
          Length = 218

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    L            I       G++  L    L R +     + +   Y+
Sbjct: 1   MEFDLSVVIDALPALFQGARLTVLITAAGLAGGMLAGLLFG-LMRAYGNALCQKIAFAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P +V +   Y   F  PVL                +  +++   + A+IAEI
Sbjct: 60  EF--VRGTPIVVQVMFIY---FALPVL-------LHIRVDAMTAAVVSIIVNSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR   ++VPRG  EA +ALG+   +    V+ P A+R + PPL +Q++  LK++SL + +
Sbjct: 108 VRGAFLSVPRGLKEAGLALGMPAWRVLAFVIGPVALRRMTPPLGNQFIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  I+    +A+EI      IYL +   +   +  +  ++ +
Sbjct: 168 GVGELTRQGQEIMASNFRAVEIWSAVAVIYLCMIGTLTFGLRTMEKRMRM 217



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 46/120 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G   T  +  +G+    + G L G  R   N L   I   YVE  R  P +V + F
Sbjct: 14  ALFQGARLTVLITAAGLAGGMLAGLLFGLMRAYGNALCQKIAFAYVEFVRGTPIVVQVMF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y ++  +L I   ++       + N G     +       +       G+ L + A R+
Sbjct: 74  IYFALPVLLHIRVDAMTAAVVSIIVNSGAYIAEIVRGAFLSVPRGLKEAGLALGMPAWRV 133


>gi|229822721|ref|ZP_04448791.1| hypothetical protein GCWU000282_00009 [Catonella morbi ATCC 51271]
 gi|229787534|gb|EEP23648.1| hypothetical protein GCWU000282_00009 [Catonella morbi ATCC 51271]
          Length = 229

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   L  +GL      +     + + SF+L     L    L      +  +A+ +
Sbjct: 9   KWHYIFNPELALKGLPTVLQGLGNTLTLSLASFLLATFGGLCLALLR-LAPLRGLRAIAI 67

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YIS F   G+P LV +   Y   +  P++          V   F +  + LS   +A+ 
Sbjct: 68  AYISFF--RGVPLLVTLFFIY---YGLPLM--------GIVMSAFTAAILGLSITASAYT 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI+R+G+  V +GQ EAA A+GL++R++ R V++PQA R  IPPL++  L+L+K+SS+A
Sbjct: 115 AEIIRAGIEGVEKGQWEAAFAVGLSYRQSLRYVVIPQATRLAIPPLSNVMLDLVKSSSIA 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +   ++      +       + + ++   IY  +    +L   +L  + AL
Sbjct: 175 AIISVPEIFQKAKVVGASEHDFMTMYILVAVIYWLICTAYSLLQAKLERRFAL 227



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+ +  + AT  G  +   RL+  + +  I   Y+  FR +P LV +FF+Y
Sbjct: 27  LQGLGNTLTLSLASFLLATFGGLCLALLRLAPLRGLRAIAIAYISFFRGVPLLVTLFFIY 86

Query: 150 KSVLSVLPIPDHSIVLPFGM 169
             +  +  +         G+
Sbjct: 87  YGLPLMGIVMSAFTAAILGL 106


>gi|261343547|ref|ZP_05971192.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
 gi|282568696|gb|EFB74231.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 226

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 103/229 (44%), Gaps = 6/229 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        + F        AKI   + V+GIV       + R  + K  +     
Sbjct: 1   MAYQFDWSSIAPSIPFLVDGFIITAKITAAAIVVGIVWGTAL-AMMRLSNIKLLRWFAAF 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++ F         L+ + +  +   P L Q             +S  +A   + AA+ +
Sbjct: 60  YVNMFRSVP-----LVMVLFWFYLVVPNLLQNILGLSPKNDIRLISAVVAFCLFEAAYYS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++ RGQ  A++ALG+T  +  RL++LPQA ++++P L +Q + L +++SL  
Sbjct: 115 EIIRAGIQSISRGQANASLALGMTQMQTMRLIVLPQAFKAMVPLLLTQGIVLFQDTSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +G  D       I  + G  +E+IL    IY   S   ++ +N L  +
Sbjct: 175 VLGLTDFFRTATNIGERDGTQVEMILFAGLIYFIFSFGASMLVNYLKKR 223



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 39/67 (58%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF+ T  +  + ++   + GT +   RLS  KL+ W    YV +FR++P ++V+F+ 
Sbjct: 17  LVDGFIITAKITAAAIVVGIVWGTALAMMRLSNIKLLRWFAAFYVNMFRSVPLVMVLFWF 76

Query: 149 YKSVLSV 155
           Y  V ++
Sbjct: 77  YLVVPNL 83


>gi|126466428|ref|YP_001041537.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylothermus marinus F1]
 gi|126015251|gb|ABN70629.1| polar amino acid ABC transporter, inner membrane subunit
           [Staphylothermus marinus F1]
          Length = 229

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 18/221 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+      +   F+LG ++++      R +  +  +   L Y+   LI 
Sbjct: 14  YYPMFLEGLKNTLILTFTSYTMGFILGFLIAI-----GRVYGPRPLRYTLLSYVE--LIR 66

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + Y                         + ++ +   +AA+ +E +RS + 
Sbjct: 67  GTPMLLQLFMVYY-----------ALPEIGVKLDPLTAAFLGMGLNSAAYQSEYLRSSIK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ EAA+++G+T  +A   ++ P A+RS IP LT++ + LLK SSLA  +   +LV
Sbjct: 116 AVPRGQWEAALSIGMTRWQAMTSIIAPIALRSSIPALTNELVYLLKYSSLAYFLTVIELV 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G  I   T   ++I  I   IY +LS ++   M  +  K
Sbjct: 176 YAGKIIGAATFAYLQIYTIIAIIYFALSYIMMRIMKIIEKK 216



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 42/103 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G  NT  L F+      I+G L+  GR+   + + +    YVE+ R  P L+ 
Sbjct: 14  YYPMFLEGLKNTLILTFTSYTMGFILGFLIAIGRVYGPRPLRYTLLSYVELIRGTPMLLQ 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +F +Y ++  +    D       GM LN+       L     A
Sbjct: 74  LFMVYYALPEIGVKLDPLTAAFLGMGLNSAAYQSEYLRSSIKA 116


>gi|89893486|ref|YP_516973.1| hypothetical protein DSY0740 [Desulfitobacterium hafniense Y51]
 gi|89332934|dbj|BAE82529.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 218

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 90/229 (39%), Gaps = 12/229 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-L 228
             N          +    KI V +   G  L+LF           + K +          
Sbjct: 1   MWNWDFAIKIFPEIFAALKITVTATFAGFFLALFLGMFLTIGSRSSLKPVAYGSKGFVEF 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I   P LV +   + +                       +  + L  + + +++E+ RSG
Sbjct: 61  IRSTPLLVQLYFIFYV-----------LPQAGLSLSPLTAGIMGLGIHYSTYLSEVYRSG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P+GQ EAA AL  +  +    +++PQA+  +IP + +  + + K + L  A+   +
Sbjct: 110 IEAIPQGQWEAAKALNFSPWQVWAKIIIPQAVPPVIPVMGNYLITMFKETPLLSAITLVE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++     I + + + +E   I   ++L LS   ++ + RL  ++    +
Sbjct: 170 ILQTAKIIGSHSFRYLEGFTIVGLLFLLLSYPCSVMIRRLEMRMTKSVR 218



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I      T    F+G   A  +G  +  G  S+ K VA+  + +VE  R+ P LV ++F+
Sbjct: 14  IFAALKITVTATFAGFFLALFLGMFLTIGSRSSLKPVAYGSKGFVEFIRSTPLLVQLYFI 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +               G+ ++              A 
Sbjct: 74  FYVLPQAGLSLSPLTAGIMGLGIHYSTYLSEVYRSGIEAI 113


>gi|325293283|ref|YP_004279147.1| Inner membrane arginine ABC transporter permease protein
           [Agrobacterium sp. H13-3]
 gi|325061136|gb|ADY64827.1| Inner membrane arginine ABC transporter permease protein
           [Agrobacterium sp. H13-3]
          Length = 276

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 5/256 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV   +    L +      +++  +      R        + T   +   S +LG +LS+
Sbjct: 26  VVGIGVITLWLLLAAGLIFAMIEGWDWAKFERYGPRYIDGLITTITLVGSSIILGALLSV 85

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                +R    +   AL   Y+  F     P L  + L Y         G          
Sbjct: 86  -PIAFARMSENRVISALAYAYVYVF--RSTPLLAQLFLIYY-GLGSFRQGLETVGLWWFF 141

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              +    ++L+  TAA+ AEI+R  + +VPRGQ+E A +LGL+     R V+LPQA+  
Sbjct: 142 REAWYCGLLSLTLNTAAYQAEILRGAIRSVPRGQIEGAASLGLSKFITFRKVILPQALIV 201

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            + P  ++ + ++K S++   V   DL+       ++T    +  L     YL++   + 
Sbjct: 202 ALRPYGNEIILMIKGSAVVSIVTVFDLMGQTRYAFSRTFDY-QAYLWAAIFYLTIVETLR 260

Query: 383 LFMNRLNAKIALKEKK 398
                + A++    K+
Sbjct: 261 HVWAWVEARLTRHLKR 276



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 43/104 (41%), Gaps = 1/104 (0%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F + +G   +     Y    + G + T  L  S +I   ++   +   R+S N++++ + 
Sbjct: 44  FAMIEGW-DWAKFERYGPRYIDGLITTITLVGSSIILGALLSVPIAFARMSENRVISALA 102

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
             YV VFR+ P L  +F +Y  + S     +   +  F      
Sbjct: 103 YAYVYVFRSTPLLAQLFLIYYGLGSFRQGLETVGLWWFFREAWY 146


>gi|260222061|emb|CBA31249.1| hypothetical protein Csp_C27600 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 226

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 11/221 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L    +T+       V   V G+VL+  A +LSRH   +   A     + T ++ 
Sbjct: 7   YTGQLLQGALMTVQLACAALVCGLVFGLVLA--ACQLSRHAWLRRPVA-----VLTGVLR 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P  +++ + Y   F    L   +F     +SP F +  ++L+    A+ +E+ R   +
Sbjct: 60  GVPEFLVVLVCY---FGLSNLINNHFDSAFDISP-FFAGVVSLALVLGAYASEVFRGSFV 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ RGQ+EAA +LGL+  +   LV LPQA R  I  L + + +LLK++SL   VG  DL+
Sbjct: 116 ALERGQLEAARSLGLSPVQTFFLVRLPQAWRIAILSLGNLWQSLLKDTSLVSVVGLEDLL 175

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                    + Q    ++    +Y  L  +    ++ L  +
Sbjct: 176 KKSNMAAQASHQPFLFLMAAAVMYFCLLAISDPLVSALERR 216



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 35/79 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y   +L G + T  LA + ++   + G ++ A +LS +  +     V   V R +P  
Sbjct: 5   QAYTGQLLQGALMTVQLACAALVCGLVFGLVLAACQLSRHAWLRRPVAVLTGVLRGVPEF 64

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           +V+   Y  + +++     
Sbjct: 65  LVVLVCYFGLSNLINNHFD 83


>gi|224824055|ref|ZP_03697163.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224603474|gb|EEG09649.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 221

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 7/219 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      M    ++ + + + G+ L      L R  H +   +   LY++ F      ++
Sbjct: 10  LPGLWQGMALTLQLLILAVLGGVALGTLI-ALGRLSHHRLLASAAKLYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P++ Q+   G  +    F S  +A   + AA+ AEIVR+G+ ++P+G
Sbjct: 64  PLLLVISWFYLVVPLVLQW-LTGNPSPVGPFTSCLVAFVMFEAAYFAEIVRAGIQSIPKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA A+G+++ +  RLV+LPQA R + P L  Q + L +++SL  AVG  D ++   +
Sbjct: 123 QAGAAYAIGMSYGQVMRLVILPQAFRKMTPLLLQQSIILFQDTSLVYAVGLMDFLNTARS 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  GQ  + +L+   +Y   S   +  + RL  ++A+
Sbjct: 183 KGDIIGQPDQFLLLAGAVYFVSSFAASALVKRLQQRLAI 221



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 39/96 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L    ++    +GTL+  GRLS ++L+A   ++YV  FR+IP L+VI + 
Sbjct: 13  LWQGMALTLQLLILAVLGGVALGTLIALGRLSHHRLLASAAKLYVNYFRSIPLLLVISWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           Y  V  VL     +                      
Sbjct: 73  YLVVPLVLQWLTGNPSPVGPFTSCLVAFVMFEAAYF 108


>gi|169796219|ref|YP_001714012.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|184157852|ref|YP_001846191.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|213157047|ref|YP_002319092.1| glutamate/aspartate transport system permease protein GltK
           [Acinetobacter baumannii AB0057]
 gi|215483674|ref|YP_002325895.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|239502271|ref|ZP_04661581.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB900]
 gi|260555281|ref|ZP_05827502.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
 gi|294838746|ref|ZP_06783429.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013113]
 gi|294841309|ref|ZP_06785992.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6014059]
 gi|294859046|ref|ZP_06796815.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013150]
 gi|301347720|ref|ZP_07228461.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB056]
 gi|301512790|ref|ZP_07238027.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB058]
 gi|301596775|ref|ZP_07241783.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB059]
 gi|169149146|emb|CAM87025.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|183209446|gb|ACC56844.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|193077142|gb|ABO11920.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
 gi|213056207|gb|ACJ41109.1| glutamate/aspartate transport system permease protein GltK
           [Acinetobacter baumannii AB0057]
 gi|213988874|gb|ACJ59173.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|260411823|gb|EEX05120.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
 gi|322508167|gb|ADX03621.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii 1656-2]
 gi|323517741|gb|ADX92122.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 225

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 11/234 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  N   ++           + V + + GI++      + R  +          Y+
Sbjct: 1   MDFSLLHNPDVIAALKEGFIFTLTVTVLAMMGGILIGTPL-AMMRLSNNALASNFAKFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       + LI + +  +F  P + +F      T      S  +  + + AAF +EI
Sbjct: 60  DLFR-----GIPLIQVIFIFYFLLPKIFEF---QSDTYWGPLFSSVVTFAIFEAAFFSEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ ++ +GQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +
Sbjct: 112 VRSGIQSISKGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVI 171

Query: 345 GFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D +    T+ N  G        LI   +Y   S +++  + RL  KIA+  
Sbjct: 172 SAPDFLGRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQKKIAIIR 225



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 6/158 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS N L +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNNALASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LYKSVLSVLPIPDHSIV-LPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLF 203
            Y  +  +      +     F   +          +    + I   S      G  L   
Sbjct: 74  FYFLLPKIFEFQSDTYWGPLFSSVVTFAIFEAAFFSEIVRSGIQSISKGQVNAGYALGFT 133

Query: 204 ATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             +  R+    +     LP+L   T ++F   +LV + 
Sbjct: 134 YGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVI 171


>gi|222106503|ref|YP_002547294.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737682|gb|ACM38578.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 216

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 24/231 (10%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    +     T         F     L  V    A R +   +    +  PLL    
Sbjct: 10  FFLLQGLKWTLALTAIGFVGGGFFGLCVALARVADSAALRKATAGYIAVFQGTPLLMQLF 69

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            + +G+  L L                            ++++ IA + + +AF+ +I R
Sbjct: 70  VVYYGVALLGL------------------------DVDAWIAVAIAFTLHASAFLGDIWR 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AVP+GQ EAA ALGL +    + V+LPQA +  +P      + L+K +SLA  VGF
Sbjct: 106 GGIQAVPKGQTEAAKALGLHYGSIMKDVVLPQAFKVSLPATIGFLVQLIKGTSLAAIVGF 165

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L   G  + NQT + + +  I   IY  +   ++L+  R   ++    +
Sbjct: 166 VELSRAGQIVSNQTFRPLTVFAIVGIIYFLICWPLSLWGARKEKRLQAAAR 216



 Score = 36.8 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L   G +     G  V   R++ +  +      Y+ VF+  P L+ +F +
Sbjct: 12  LLQGLKWTLALTAIGFVGGGFFGLCVALARVADSAALRKATAGYIAVFQGTPLLMQLFVV 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  V  +    D  I +     L+              A
Sbjct: 72  YYGVALLGLDVDAWIAVAIAFTLHASAFLGDIWRGGIQA 110


>gi|187927461|ref|YP_001897948.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|309779837|ref|ZP_07674592.1| glutamate/aspartate transport system permease protein GltJ
           [Ralstonia sp. 5_7_47FAA]
 gi|187724351|gb|ACD25516.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|308921414|gb|EFP67056.1| glutamate/aspartate transport system permease protein GltJ
           [Ralstonia sp. 5_7_47FAA]
          Length = 242

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 4/233 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +  V       N   L +    + T   + + S+++ +V+      L R    K    
Sbjct: 4   HWNWGVFFTEAAQNQTYLDWLLAGLKTTVVLGLSSWIIALVIGSVLGVL-RTVPNKWLSG 62

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   Y+  F    +P +V + + Y +  +  V G       +  +  F+S  + L  +TA
Sbjct: 63  LAAAYVEVF--RNIPLIVQLFIWYFVMPEL-VPGGDYIKQMNPATAMFLSAMLCLGTFTA 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A + E VRSG+ ++PRGQ  A +A+G T  +  R V+LP + R I+PPLTS++LN+ KNS
Sbjct: 120 ARVCEQVRSGINSLPRGQRNAGLAMGFTLAQTYRYVMLPMSFRIIVPPLTSEFLNIFKNS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++A  +G  +L + G  +++ T Q  E  +    +Y+ +++ +   M  + A+
Sbjct: 180 AVASTIGLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGLMRWVEAR 232



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 45/86 (52%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            + +Y   +L G   T  L  S  I A +IG+++G  R   NK ++ +   YVEVFRNIP
Sbjct: 16  QNQTYLDWLLAGLKTTVVLGLSSWIIALVIGSVLGVLRTVPNKWLSGLAAAYVEVFRNIP 75

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLP 166
            +V +F  Y  +  ++P  D+   + 
Sbjct: 76  LIVQLFIWYFVMPELVPGGDYIKQMN 101


>gi|157369896|ref|YP_001477885.1| arginine transporter permease subunit ArtM [Serratia proteamaculans
           568]
 gi|157321660|gb|ABV40757.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 222

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 105/227 (46%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + + + ++ +VLSL  T +      KT    PL+ I   L  G
Sbjct: 1   MFEFLPEIIKGLHTSLTLTITALIVALVLSLVLTVI---LTLKTPILTPLVKIYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P + ++ ++      P ++   IAL+  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPGQFPAIREYPWLWNLLSQP-WLCAMIALALNSAAYTTQLFYGAVRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++  ++   +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPAGQWQSCEALGMSRSQSL-RILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      +YL ++ ++ L M  +  +    E++
Sbjct: 176 YSQLMYGRTYDVM-VFGAAGLVYLCVNGLLTLLMRLVERRALAFERR 221


>gi|91787397|ref|YP_548349.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696622|gb|ABE43451.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 212

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 11/216 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
               T  +       + S +  +   L    L      +       +     +  G P L
Sbjct: 7   WDIFTFLLGAMRWTVLLSLIAFVGGGLGGMALLLLRFTRVRGVETAVAWYVQIFQGTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + L Y           F        +   +S  I L+ Y +A++ EI R  + A+ +G
Sbjct: 67  MQLFLVY-----------FGLALMGMDTSALVSAAICLTLYASAYLTEIWRGCVNAIHKG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+ +L L++ +  R V+LPQA R  I P     + ++K ++LA  +GF +L   G  
Sbjct: 116 QWEASTSLALSYTQQMRHVILPQAWRVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQM 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I N T Q          +Y +L   ++ +  RL  +
Sbjct: 176 ISNATYQPFLAFTFVGLLYFALCYPLSWWSQRLENR 211


>gi|229188847|ref|ZP_04315881.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 10876]
 gi|228594660|gb|EEK52445.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus ATCC 10876]
          Length = 214

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGIL-------RYTKIPVVSQVLGVIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFILVACMYFIVNYSLSILSRRLELR 214



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|157964196|ref|YP_001499020.1| amino acid ABC transporter permease [Rickettsia massiliae MTU5]
 gi|157843972|gb|ABV84473.1| Amino acid ABC transporter permease protein [Rickettsia massiliae
           MTU5]
          Length = 218

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 104/228 (45%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      + F         K  V + + G+V+ +    + +    +  +     Y 
Sbjct: 1   MFEYLIKFYPKIFFIVEGTLVTLKYSVIAVIFGLVIGMLL-AICKVNKNRALRLFANFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ +++ Y   F  P +    F         FM+  I+ S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLSIIY---FASPYIIGVKF-------SVFMAGAISFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+  V +GQ EAA AL +     T+ ++LPQA+++I P L ++ +NL+K S++   +
Sbjct: 108 IRAGINTVDKGQFEAAEALAIPKFLITKDIILPQAVKNIFPSLVNELVNLIKESAIISML 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      +LI    Y  L ++I+     +  K+
Sbjct: 168 GEMDLMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKM 215



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N+ +      Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|187923119|ref|YP_001894761.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714313|gb|ACD15537.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 237

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R   +K    L  LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSIPL-AVARVSKKKWLSRLVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++     +  +          +A +  T A+  EI    + A P G++EAA A G++
Sbjct: 84  SLEIIRNHE-LTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATPYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T Q+   
Sbjct: 143 SFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPDILKIARDVNSATYQSFNA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     R   +
Sbjct: 203 FGIAALLYLCISFALVWLFRRAERR 227



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y    L G V T WL    +     +   +   R+S  K ++ +  +
Sbjct: 5   IQEYWRNYLYTDGYR---LTGVVITLWLLVVSIGLGFCLSIPLAVARVSKKKWLSRLVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  I +H +   F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLEIIRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|27378024|ref|NP_769553.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27351170|dbj|BAC48178.1| blr2913 [Bradyrhizobium japonicum USDA 110]
          Length = 368

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 14/229 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+F  +         +     +  F    G  L +    L R       ++L +LY+
Sbjct: 147 MWGGVFGLSFVSQDRWGGLPVTLILATFGLAFGFPLGILV-ALGRRSKLPAIRSLSVLYV 205

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L +L+ +A    + F   +   FN         + +   IA+  +  A++AE+
Sbjct: 206 ELIRGVPLVSLLFMA---SVMFPLFMPSGFNI-------DKLLRAQIAIILFAGAYLAEV 255

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL AVPRGQ EAA ALGL++ +  RL++LPQA+R +IPPL + ++   K++SL + +
Sbjct: 256 IRGGLQAVPRGQYEAAEALGLSYWRKHRLIVLPQAIRHVIPPLVNTFIAFFKDTSLVLII 315

Query: 345 GFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G  DL++   T I        ++E+ +    IY      ++ +   L A
Sbjct: 316 GIFDLLTTAKTAIIDPAWQQFSVEVYIFVAAIYFVFCFAMSRYSRGLEA 364


>gi|89069637|ref|ZP_01156976.1| putative amino-acid transport system permease abc transporter
           protein [Oceanicola granulosus HTCC2516]
 gi|89044835|gb|EAR50935.1| putative amino-acid transport system permease abc transporter
           protein [Oceanicola granulosus HTCC2516]
          Length = 264

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 12/218 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +  + L      +     + +  F L  ++ L    ++        +     YI   ++
Sbjct: 32  DIYLQVLDALAKGVRITVIVTLAGFALASLMGLGL-AMASLSRHLALRQAARFYIE--IV 88

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGST--------VSPEFMSLYIALSCYTAAFI 281
            G+P +VL+ L         ++  +N IG             P      +ALS   +AFI
Sbjct: 89  RGVPIIVLL-LYVAFVLAPALVAGWNEIGARIGLEPVRTRDFPFVWRATMALSIGYSAFI 147

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+GL +V  GQ+EAA ALGL+  +  R V+ PQA R I+PPL + ++ ++K+SSL 
Sbjct: 148 AEVFRAGLQSVDEGQVEAAEALGLSPWRRFRHVVFPQAFRRILPPLGNDFVAMVKDSSLV 207

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             +G AD+  +G        +  E   +  FIYL ++I
Sbjct: 208 SVLGVADVTQMGKVTAAGNFRYFETYNMVAFIYLVMTI 245



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 43/116 (37%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+  G   T  +  +G   A+++G  +    LS +  +    R Y+E+ R +P +V++
Sbjct: 38  LDALAKGVRITVIVTLAGFALASLMGLGLAMASLSRHLALRQAARFYIEIVRGVPIIVLL 97

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            ++   +   L    + I    G+                   I   +F+  +  +
Sbjct: 98  LYVAFVLAPALVAGWNEIGARIGLEPVRTRDFPFVWRATMALSIGYSAFIAEVFRA 153


>gi|260776171|ref|ZP_05885066.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607394|gb|EEX33659.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 246

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    +  +A+  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQILLNNGLYAINESLNE 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFASSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   A R +LLPQ +R  +P   + +L LLK ++L   +G  D+V +       T  
Sbjct: 152 YGMSPVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  K ++  +
Sbjct: 212 PFTFYMAVAIIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A ++G L    +++  +    I  +Y  V R IP LV+
Sbjct: 7   YEASIFKGAIVTIEVALLSLLLAMVLGMLGALAKMAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYK--------SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + ++    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNGLYAINESLNEWFASSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|225871086|ref|YP_002747033.1| ABC transporter permease protein [Streptococcus equi subsp. equi
           4047]
 gi|225700490|emb|CAW94927.1| ABC transporter permease protein [Streptococcus equi subsp. equi
           4047]
          Length = 280

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 9/255 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +   + +   L  L                   +    +T+            L +V ++
Sbjct: 19  LTSGWAWYDKLISLIPEGKLFSWHAVFDAIPDIIRRLPITLGLTIAGAALGLFLALVFAI 78

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGS 260
                 R  +       P+  +    + G P LV + L Y     F K +  ++ F    
Sbjct: 79  VKINRVRILY-------PIQAVFVSFLRGTPILVQLMLSYYGIPLFLKFLNQRYGFDWNI 131

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
              P  +    A +   AA+ +E +R+ + +V  G++EAA +LG+T  +  R V++P A 
Sbjct: 132 NAIPASIFAITAFAFNEAAYTSETIRAAIQSVHTGEIEAAKSLGMTSAQVYRRVIIPNAA 191

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
               P L +  + L K +SLA   G  ++ +    +     +  E  +    +Y  +SI+
Sbjct: 192 VVATPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGADYRYFERYISVALVYWGISIL 251

Query: 381 IALFMNRLNAKIALK 395
           I      +   +A+K
Sbjct: 252 IEQAGRLIEYNMAIK 266


>gi|298529734|ref|ZP_07017137.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511170|gb|EFI35073.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 231

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 93/239 (38%), Gaps = 18/239 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTG 216
           +            L    LT+       V +  LG++  L         R +   +    
Sbjct: 1   MSFFDLHGYGWLLLQGAKLTLYVGLCSMVLAMGLGLIGVLCKFSRSSLVRFAADTYTTVI 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +P L +   + +G+PTL+         F +PV   F+          F++    +   
Sbjct: 61  RGIPELILILLVYYGVPTLIQDVSA---KFGQPVYISFD---------PFVAGVATIGFI 108

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             AF  E+ R   +AVPRGQ+EAA A G++     R V+LPQ MR  +P L + ++ L+K
Sbjct: 109 YGAFSTEVFRGAYLAVPRGQVEAARACGMSPALTFRRVVLPQMMRFALPGLGNVWMVLIK 168

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            ++L   +   +L+         T +          IYL ++I   L       + +  
Sbjct: 169 ATALISVIQLPELMRNADIAARATREPFTFFFAASLIYLFITIGSNLVQQWAEKRASRG 227



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T ++    M+ A  +G +    + S + LV +    Y  V R IP L++
Sbjct: 9   YGWLLLQGAKLTLYVGLCSMVLAMGLGLIGVLCKFSRSSLVRFAADTYTTVIRGIPELIL 68

Query: 145 IFFLYKSVL 153
           I  +Y  V 
Sbjct: 69  ILLVYYGVP 77


>gi|322386911|ref|ZP_08060535.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269193|gb|EFX52129.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 278

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 15/210 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            F  +L ++ ++     +R  +       P+  +    + G P LV + L Y   F  P+
Sbjct: 63  FFGIILAMIFAVVKINRTRILY-------PIQSLFVSFLRGTPLLVQLMLTY---FGIPL 112

Query: 251 L-----GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           L      ++         P  +   IA +   AA+ +E +R+ +++V  G++EAA +LG+
Sbjct: 113 LLKAINQKYGTAFNINAIPASVFAIIAFAFNEAAYASETIRAAILSVDPGEIEAARSLGM 172

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+R+    V++P A     P L +  + L K +SLA + G  ++ +    I     +  E
Sbjct: 173 TNRQVYLRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEVFAKAQAIGGSDYRYFE 232

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +    IY  ++I+I      +   + +K
Sbjct: 233 RFISVSIIYWIVNIVIEQIGRAIEKAMDIK 262


>gi|315182022|gb|ADT88935.1| hypothetical transmembrane permease component of ABC transporter
           [Vibrio furnissii NCTC 11218]
          Length = 238

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 5/213 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY--QL 244
             + + +  +G+VL      LS     K  +    +Y  T ++ GLP L+ + + Y    
Sbjct: 26  LGLALCALPVGMVLGTGVAALS-ISKHKGHRWFATVY--TTVLRGLPELLTLFIIYHGVG 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L   +   G      F +  IAL    + + AE++R    A+ +GQ EA  +L 
Sbjct: 83  LLINKTLKWLDPSNGFFELNPFGAGVIALGLVFSGYAAEVLRGAWKAMDKGQREAGYSLA 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +   L+  PQ +R  +P L + ++NLLK+++L   +   DL+      +  T +  
Sbjct: 143 MGRGQIFWLIERPQLLRLALPGLGNLWINLLKDTALVSVIALDDLMRAANIAVGATKKPF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              L     Y ++ +     +  +  +     +
Sbjct: 203 LFYLTVCLAYWAVCVCCERVLAAMEVRSKRGIR 235



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 69/193 (35%), Gaps = 7/193 (3%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           DS +   +L G   T  LA   +    ++GT V A  +S +K   W   VY  V R +P 
Sbjct: 11  DSGWGDELLKGLAITLGLALCALPVGMVLGTGVAALSISKHKGHRWFATVYTTVLRGLPE 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ +F +Y  V  ++      +    G F                A   VFS     VL 
Sbjct: 71  LLTLFIIYHGVGLLINKTLKWLDPSNGFFE------LNPFGAGVIALGLVFSGYAAEVL- 123

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
             A +       + G +L +     F +   P L+ +AL    +    +L     +    
Sbjct: 124 RGAWKAMDKGQREAGYSLAMGRGQIFWLIERPQLLRLALPGLGNLWINLLKDTALVSVIA 183

Query: 262 VSPEFMSLYIALS 274
           +     +  IA+ 
Sbjct: 184 LDDLMRAANIAVG 196


>gi|293397048|ref|ZP_06641322.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291420519|gb|EFE93774.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 219

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L +I   +I G P +V +   Y   F  P+               F
Sbjct: 42  FARTYGGWIANHIALAFIE--VIRGTPIVVQVMFIY---FALPMAF------SDLRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R+  R V++P A+R ++PP
Sbjct: 91  TAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRETIRYVVMPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVLR 210

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 211 RLERRMKI 218


>gi|312115425|ref|YP_004013021.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220554|gb|ADP71922.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 230

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 2/230 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH-EKTGKALPLLYISTF 227
           MF N               +  VF+  L I+ ++F T         +     PL  I+  
Sbjct: 1   MFSNFDFQVIIDALPYLFLQGMVFTLKLTILAAIFGTLFGTVLALMRLSGVWPLPQIAGA 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +  + +L L+ + +   F  P + Q             F++  I  S + A F +EI+R
Sbjct: 61  YVNFVRSLPLLLVIFWFFFLVPFIAQKMVGSPRPIPIDPFLTALITFSLFEAVFFSEIMR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++P+GQ+ A  ALGL++ +  R ++LPQA R+++P L +Q + L +++SL   +  
Sbjct: 121 AGIQSLPKGQVAAGYALGLSYTQVMRRIVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSL 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D + + G I  + G+  E+ +    +Y  +S   +  + RL A  A+  
Sbjct: 181 NDFLGIAGKIGQRDGRLTEMYIFAALVYFLISFAASQAVRRLQAHTAIIR 230



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 10/161 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G V T  L     I  T+ GT++   RLS    +  I   YV   R++P L+VIF+ 
Sbjct: 18  FLQGMVFTLKLTILAAIFGTLFGTVLALMRLSGVWPLPQIAGAYVNFVRSLPLLLVIFWF 77

Query: 149 YK--------SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           +          V S  PIP    +     F     + F  +       +       G  L
Sbjct: 78  FFLVPFIAQKMVGSPRPIPIDPFLTALITFSLFEAVFFSEIMRAGIQSLPKGQVAAGYAL 137

Query: 201 SLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            L  T++ R     +     LP+L   T ++F   +LV + 
Sbjct: 138 GLSYTQVMRRIVLPQAFRNMLPVLLTQTIVLFQDTSLVYVL 178


>gi|317047372|ref|YP_004115020.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948989|gb|ADU68464.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 218

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I +   + G V+ L A    R    +  K + L+++
Sbjct: 1   MNFETKYIWESLPLLLQGLQLTLIISLSGLLGGFVIGLLAGT-CRALGGRITKTISLIFV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P++                +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIMVQVMFIY---FALPMV-------LPIRIDPVSAAIVTIIINSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA++A+GL+ R     V++P A+R +IP L +Q++  +K++SL + +
Sbjct: 108 TRGAILSINKGFKEASLAMGLSQRSTLWYVIMPLALRRMIPALGNQWIISIKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+E+      IYL +++ ++  + +L  +I +
Sbjct: 168 GVAELTRQGQEIIAGNFRALEVWTAVALIYLLVTLCLSFLLKQLEKRIHI 217


>gi|222153536|ref|YP_002562713.1| ABC transporter permease [Streptococcus uberis 0140J]
 gi|222114349|emb|CAR43067.1| ABC transporter permease protein [Streptococcus uberis 0140J]
          Length = 274

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 2/255 (0%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ +   +          S V    +F     L      ++        + V  ++  + 
Sbjct: 7   IMSYFLIASSWKWFDTLVSYVPEGKLFSWRSVLGALPDIINRLPITLFLTLVGALIGLIL 66

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGST 261
           A   +     +T    P+  I    + G P LV + L Y       K +   +       
Sbjct: 67  ALLFAIVKINRTKFLYPIQAIFVSFLRGTPILVQLMLTYYGIPLLLKYLNLTYGLNWNIN 126

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P  +   +A +   AA+ +E +R+ + +V  G++EAA +LG+T  +  + V++P A  
Sbjct: 127 AIPASVFAIVAFAFNEAAYTSETIRAAIQSVNSGEIEAARSLGMTPFQVYKRVIIPNAAV 186

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              P L +  + L K +SLA   G  ++ +    +     +  E  +    +Y  +SI I
Sbjct: 187 VATPTLINGLIGLTKGTSLAFNAGIVEMFAQAQILGGADYRYFERYISVALVYWVISIAI 246

Query: 382 ALFMNRLNAKIALKE 396
             F + L   +A+ +
Sbjct: 247 EQFGSYLEKTMAIGD 261


>gi|254253238|ref|ZP_04946556.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124895847|gb|EAY69727.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 246

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLAAIGTVYVSIF--RNVPLIVQFFIWYLVVPELLPASVGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + A+  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEARTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK +A I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRN+P +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNVPLIVQFFIWYLVVPELLPASVGTWI 101


>gi|283954462|ref|ZP_06371982.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 414]
 gi|283794079|gb|EFC32828.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 414]
          Length = 247

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +     +L I D S V+ +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPYEILKIQDPSGVVSYGYTENAKAYLKSYLVTLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++      R    KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAIL-----RFSKFKTLNLIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVVDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +   R S  K +  I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLVTLLLTACAVIIGVIIGFSLAILRFSKFKTLNLIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|118476328|ref|YP_893479.1| glutamine ABC transporter permease [Bacillus thuringiensis str. Al
           Hakam]
 gi|196035649|ref|ZP_03103052.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|218901838|ref|YP_002449672.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|228913331|ref|ZP_04076964.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228925830|ref|ZP_04088914.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228932069|ref|ZP_04094961.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228944394|ref|ZP_04106767.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|118415553|gb|ABK83972.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Bacillus thuringiensis str. Al Hakam]
 gi|195991616|gb|EDX55581.1| amino acid ABC transporter, permease protein [Bacillus cereus W]
 gi|218539284|gb|ACK91682.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH820]
 gi|228815296|gb|EEM61544.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228827652|gb|EEM73394.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228833845|gb|EEM79398.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228846240|gb|EEM91259.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 214

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 19/215 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           I  Q     I   ++   +Y  ++  +++   RL 
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLE 212



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|153822068|ref|ZP_01974735.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|126520401|gb|EAZ77624.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
          Length = 279

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  ++ V   P  + +L +G       +            I     ++  +    A  L 
Sbjct: 37  WIWLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALALG 96

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       ++L  +YI  +    L T++ +A           +    F+   +   + + 
Sbjct: 97  RRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPLFLSQGSEIDKLLR 146

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++LPQA++  IP + 
Sbjct: 147 ALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIV 206

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++SL + +G  D++ +G +     N  G A E  +    ++      ++ + 
Sbjct: 207 NTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYS 266

Query: 386 NRLNAKIALKEKK 398
             L  K+    K+
Sbjct: 267 IWLEGKLHTGHKR 279



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P + V+F     
Sbjct: 71  GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 130

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   L        L   +       +     +       +    +     + LS +    
Sbjct: 131 LPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMG 190

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +     +P +  +   +F   +LVLI   +  L   +      N++G +T S  F
Sbjct: 191 LIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVF 250

Query: 267 MSLYIALSCYTAAFIA 282
           ++L   + C+  +  +
Sbjct: 251 VALVFWIFCFGMSRYS 266


>gi|186475920|ref|YP_001857390.1| glutamine ABC transporter permease [Burkholderia phymatum STM815]
 gi|184192379|gb|ACC70344.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 218

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    L            I V     G+ +  F   L R +     + +  +Y+
Sbjct: 1   MQFDLSVVADALPALLQGAKLTVLITVVGLAGGLAVG-FLFGLMRAYGNALMQKIAFVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P +V +   Y   F  PVL        +       +  +++   + A+IAEI
Sbjct: 60  EF--VRGTPIVVQVMFIY---FALPVL-------LNVRVDAMTAAVVSIVVNSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR   ++VPRG  EA +ALG+   +    V+ P A+R + P L +Q++  LK++SL + +
Sbjct: 108 VRGAFLSVPRGLKEAGLALGMPMWRVLAFVIGPVAIRRMTPSLGNQFIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  I+    +A+EI      IYL +  ++   +  +  ++ +
Sbjct: 168 GVGELTRQGQEIMASNFRAVEIWTAVAAIYLCMIGVLTFCLRTMEKRMRM 217



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +   G+     +G L G  R   N L+  I  VYVE  R  P +V + F
Sbjct: 14  ALLQGAKLTVLITVVGLAGGLAVGFLFGLMRAYGNALMQKIAFVYVEFVRGTPIVVQVMF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y ++  +L +   ++       + N G     +       +       G+ L +   R+
Sbjct: 74  IYFALPVLLNVRVDAMTAAVVSIVVNSGAYIAEIVRGAFLSVPRGLKEAGLALGMPMWRV 133


>gi|322832575|ref|YP_004212602.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167776|gb|ADW73475.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 304

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 113/269 (42%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R    +   F L   + S+         +    F +   LS    T+       +F  +
Sbjct: 23  WRLAGAVFSAFILLGIIQSIATNSRWEWGVFRQWFFDPVILSGLGKTLLLTLLGTLFGVI 82

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL---- 251
            G  L+L     +R        AL   YI  F    L  +++I   +   +D   L    
Sbjct: 83  FGTALAL-----ARLSKSYLLNALAWGYIWLFRSLPLLLVLIILYNFSYLYDNLSLGIPF 137

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F       +  +F    + LS   +A+ AEI+R G++ V  GQ EAA ALGL   +
Sbjct: 138 TTISFFSTPTVDLLDQFSVAVLGLSLVQSAYTAEIIRGGILGVEHGQHEAAAALGLPAYR 197

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            T  ++LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++
Sbjct: 198 RTFRIILPQALRSILPTGFNEVISLAKGTSIVYVLSMPELFYTVQVIYNRTQQVIPLLMV 257

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++ ++++    +    +    +
Sbjct: 258 ATIWYLLITTVLSVLQYYVERYFSRGTVR 286


>gi|292488871|ref|YP_003531758.1| histidine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900016|ref|YP_003539385.1| histidine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291199864|emb|CBJ46988.1| histidine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291554305|emb|CBA21655.1| Histidine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 238

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + V S  LG  ++L    ++R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFSGVAVTLWLLVVSVGLGGCMALLL-SIARVSPYKAIRF--PVWLFTYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   V+     +  +          +AL+  T A+  E+    + AVP
Sbjct: 71  LYVQLLVFYSGMYTLEVVKGTELL-NAFFRSGLNCTLLALTLNTCAYTTEVFAGAIRAVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R +++P A+R+ +P  +++ + +L +++LA      DL+ V 
Sbjct: 130 HGEIEAARAYGFSTFKLYRCIIMPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      +   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFIAFSLAAVLYLIISYVLISLFRKAEKR 227


>gi|291616875|ref|YP_003519617.1| ArtQ [Pantoea ananatis LMG 20103]
 gi|291151905|gb|ADD76489.1| ArtQ [Pantoea ananatis LMG 20103]
          Length = 238

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 12/224 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               + V + + G+VL++                        + LP + +  F+ FG   
Sbjct: 13  MTVGLAVCALIAGLVLAMIFAGWESLRLKPLAWIGTTLVTLIRGLPEILVVLFIYFGASQ 72

Query: 235 LVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           L+L ++  + L+F    L     I    VSP F+   IAL+   AA+ ++ +R  L AVP
Sbjct: 73  LLLTLSDGFTLNFGLFRLPVQMHIENFDVSP-FLCGVIALAMLYAAYASQTLRGALKAVP 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 IGQWESGQALGMKKSAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I  +T +     L+   IYL++++     + R+  +    E+
Sbjct: 192 KSIATRTQEPFTWFLVAAAIYLAITLFSQAVLRRIELRTTRFER 235


>gi|260550664|ref|ZP_05824873.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
 gi|260406375|gb|EEW99858.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
          Length = 225

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 11/234 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  N   ++           + V + + GI++      + R  +          Y+
Sbjct: 1   MDFSLLHNPDVIAALKEGFIFTLTVTVLAMMGGILIGTPL-AMMRLSNSTIASNFAKFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       + LI + +  +F  P + +F      T      S  +  + + AAF +EI
Sbjct: 60  DLFR-----GIPLIQVIFIFYFLLPKIFEF---QSDTYWGPLFSSVVTFAIFEAAFFSEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ ++ +GQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +
Sbjct: 112 VRSGIQSISKGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVI 171

Query: 345 GFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D +    T+ N  G        LI   +Y   S +++  + RL  KIA+  
Sbjct: 172 SAPDFLGRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQKKIAIIR 225



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 6/158 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS + + +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNSTIASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LYKSVLSVLPIPDHSIV-LPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLF 203
            Y  +  +      +     F   +          +    + I   S      G  L   
Sbjct: 74  FYFLLPKIFEFQSDTYWGPLFSSVVTFAIFEAAFFSEIVRSGIQSISKGQVNAGYALGFT 133

Query: 204 ATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             +  R+    +     LP+L   T ++F   +LV + 
Sbjct: 134 YGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVI 171


>gi|163748032|ref|ZP_02155354.1| putative transmembrane permease component of ABC transporter
           [Oceanibulbus indolifex HEL-45]
 gi|161378692|gb|EDQ03139.1| putative transmembrane permease component of ABC transporter
           [Oceanibulbus indolifex HEL-45]
          Length = 235

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 9/230 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L+   +TM           ++G V +     +SRH   +      + +  T ++ 
Sbjct: 12  WGDEILAGLAITMQLAIVTLPIGLLIGFVAAFA--SMSRHAGLR-----AIGFGYTTIMR 64

Query: 231 GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSG 288
           GLP ++ + + Y  +      L  +   GG+ +    F +   AL+    AF  E++R  
Sbjct: 65  GLPEILTLFVVYNGVGLLLNKLAVWWNPGGTNIEFSPFAAGVTALAMVFGAFAGEVLRGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
             ++  GQMEA  A+G++ RK    + LPQ  R  +P L + ++N+LK+++L   +   D
Sbjct: 125 FQSLDEGQMEAGRAIGMSPRKIFFRIRLPQVWRFALPGLGNLWINMLKDTALVSIIALDD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L+ +    +  T Q     L+   +Y +L ++  + +  +  +     ++
Sbjct: 185 LMRMTKVAVGVTKQPFTFYLLACLVYWALCVLSEVVLAHMERRANRGIRR 234



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 67/215 (31%), Gaps = 20/215 (9%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   IL G   T  LA   +    +IG +     +S +  +  I   Y  + R +P ++ 
Sbjct: 12  WGDEILAGLAITMQLAIVTLPIGLLIGFVAAFASMSRHAGLRAIGFGYTTIMRGLPEILT 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL---- 200
           +F +Y  V  +L                   + F        A   VF    G VL    
Sbjct: 72  LFVVYNGVGLLLNKLAVWWNPGG------TNIEFSPFAAGVTALAMVFGAFAGEVLRGAF 125

Query: 201 ------SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL----KYQLHFDKPV 250
                  + A R       K    + L  +  F + GL  L +  L       +     +
Sbjct: 126 QSLDEGQMEAGRAIGMSPRKIFFRIRLPQVWRFALPGLGNLWINMLKDTALVSIIALDDL 185

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           +       G T  P    L   L  +    ++E+V
Sbjct: 186 MRMTKVAVGVTKQPFTFYLLACLVYWALCVLSEVV 220


>gi|104783490|ref|YP_609988.1| general amino acid ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95112477|emb|CAK17204.1| general amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 365

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + ++    +     GL+    +      + +    +GIV 
Sbjct: 112 PLFIKRFPRKAVYGLGFLVLYPVLAYTLLHGGYLGLATVQTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    K + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVKVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMSFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR GL A+P+GQ EAA A+GL + +A  LV+LP
Sbjct: 229 -------KLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPTWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 13/200 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVKVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPIPDHSI--------VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   LP              V+ F        +      +         +  LG   ++ 
Sbjct: 217 LPLFLPEGMSFDKLLRAMIGVILFQSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMG 276

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
              L +         +P +  +   +F   +LV+I   +  L+  K       ++G +T 
Sbjct: 277 LVILPQALKL----VIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPTWLGMATE 332

Query: 263 SPEFMSLYIALSCYTAAFIA 282
              F +L   + C+  +  +
Sbjct: 333 GYVFAALVFWIFCFGMSRYS 352


>gi|219669812|ref|YP_002460247.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219540072|gb|ACL21811.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 262

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 20/251 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  +   +L VL    +S+     +       +           I  FS +L +++  F 
Sbjct: 25  IALVSAFMLGVLLWAFYSLDYTLRLDTVYLYRTKFIDGFLMTIIIAFFSLILSLIIGSFL 84

Query: 205 TRLSRHFHEKTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
               +       + LPL Y       +I G P LV I + + +                 
Sbjct: 85  AFAGK------SRFLPLHYFSKAYVEIIRGTPLLVQIYVFFYI-----------IATAMH 127

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +S  ++   I LS ++ A+I EI+R+G+ ++   Q+E A +LG T  +  R +++PQ  +
Sbjct: 128 LSNRYVLGVIILSVFSGAYICEIIRAGIESIEASQIETARSLGFTSYQRYRYIIIPQVFK 187

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PPL  Q ++L+K+SSL   +  ++L      + + T    E  ++   +Y+ L++ I
Sbjct: 188 RILPPLAGQLVSLIKDSSLLSVIAVSELTKNVQEVDSFTFATFENYIVLALLYMILTVPI 247

Query: 382 ALFMNRLNAKI 392
           +     L  K 
Sbjct: 248 SYASKVLERKF 258



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 38/77 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T  + GF+ T  +AF  +I + IIG+ +     S    + +  + YVE+ R  P LV 
Sbjct: 55  YRTKFIDGFLMTIIIAFFSLILSLIIGSFLAFAGKSRFLPLHYFSKAYVEIIRGTPLLVQ 114

Query: 145 IFFLYKSVLSVLPIPDH 161
           I+  +  + + + + + 
Sbjct: 115 IYVFFYIIATAMHLSNR 131


>gi|89900316|ref|YP_522787.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89345053|gb|ABD69256.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 229

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 4/215 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + + ++ I+L L A   ++        AL  LY  T +I G+P LVL+ L +  
Sbjct: 15  LTVGVSLAALLVAIILGL-AGAGAKLSGRPILVALATLY--TTIIRGIPELVLMLLVFYG 71

Query: 245 H-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L +      +     F +  + +     A++ E  R  ++A+P+GQ EAA A 
Sbjct: 72  GTIGLNNLFEAMGSETTVDINPFFAGVLTIGFIYGAYMTETFRGAILAIPKGQAEAAWAF 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +    +  PQ +R  +P  T+ +L L+K ++L   +G  ++  +       T   
Sbjct: 132 GMGRTQTFMRITAPQMVRYALPGFTNNWLVLIKATALVSLIGLQEMTYLAKQASAATRSP 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L    ++L  + +  + + RLNA+ +L  K+
Sbjct: 192 FAYFLFTAALFLIYTTVSLMVLRRLNARYSLGTKR 226



 Score = 36.8 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G V T  ++ + ++ A I+G      +LS   ++  +  +Y  + R IP LV++  +
Sbjct: 9   ILYGAVLTVGVSLAALLVAIILGLAGAGAKLSGRPILVALATLYTTIIRGIPELVLMLLV 68

Query: 149 YKSVL 153
           +    
Sbjct: 69  FYGGT 73


>gi|330504738|ref|YP_004381607.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328919024|gb|AEB59855.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 365

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 71/295 (24%), Positives = 124/295 (42%), Gaps = 33/295 (11%)

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           ATI   +VGA  L   ++      VY   F  I P++    L+  V  +  +P       
Sbjct: 101 ATIWLAIVGAAPLFVPQMPRK--AVYGVAFLVIYPIIAWCLLHGGVFGLSVVPTSR---- 154

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                         LT+         +  LGI+L+L      R  +    K + + +I  
Sbjct: 155 ---------WGGLMLTLVIAYVGITGALPLGILLAL-----GRRSNLPAIKVICVTFIEF 200

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +    L  +VL      L    P     +         + +   + +  + AA+IAE+VR
Sbjct: 201 WRGVPL-IIVLFMSSVMLPLFLPEGMSLD---------KLLRALVMVIFFEAAYIAEVVR 250

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ A+P+GQ EAA A+GL + +   LV+LPQA++ +IP + + ++ L K++SL + +G 
Sbjct: 251 GGMQAIPKGQYEAAAAMGLGYWRTMGLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGL 310

Query: 347 ADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            DL+       T  +  G A E  +    I+      ++ +   L  K+    K+
Sbjct: 311 FDLLNSIKQATTDPSWLGMATEGYVFAALIFWIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A+ G+  A  +G L+  GR S    +  IC  ++E +R +P ++V+F     
Sbjct: 157 GLMLTLVIAYVGITGALPLGILLALGRRSNLPAIKVICVTFIEFWRGVPLIIVLFMSSVM 216

Query: 152 VLSVLPIPDH----SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +   LP           L   +F     ++              +     + L  + T  
Sbjct: 217 LPLFLPEGMSLDKLLRALVMVIFFEAAYIAEVVRGGMQAIPKGQYEAAAAMGLGYWRTMG 276

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +     +P +  +   +F   +LV+I   +  L+  K      +++G +T    F
Sbjct: 277 LVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSIKQATTDPSWLGMATEGYVF 336

Query: 267 MSLYIALSCYTAAFIA 282
            +L   + C+  +  +
Sbjct: 337 AALIFWIFCFGMSRYS 352


>gi|308094386|ref|ZP_05888982.2| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AN-5034]
 gi|308094323|gb|EFO44018.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AN-5034]
          Length = 349

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 117/263 (44%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P  + I+  + ++   +        +     +         +T+       V S  +G+
Sbjct: 102 TPKRLWIWLFFVNIYPFIVAALLYGGVFGLEVVETHKWGGLLVTLIIALVGIVVSLPIGV 161

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R       +++  +YI  +    L T++ +A           +    F+ 
Sbjct: 162 ALAL-----GRRSDMPIIRSICTIYIEVWRGVPLITVLFMA----------SVMLPLFLA 206

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             + + + +   I +  ++AA++AE+VR GL A+P+GQ EAA ALGL++ K T L++LPQ
Sbjct: 207 EGSETDKLIRALIGVVMFSAAYMAEVVRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQ 266

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYL 375
           A++  IP + + ++ L K++SL + +G  D++ +G          G A E  +    ++ 
Sbjct: 267 ALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQAANTDPEWLGFATESYVFVALVFW 326

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   L  K+    K+
Sbjct: 327 VFCFGMSRYSIWLENKLHTGHKR 349



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ +  IG  +  GR S   ++  IC +Y+EV+R +P + V+F     
Sbjct: 141 GLLVTLIIALVGIVVSLPIGVALALGRRSDMPIIRSICTIYIEVWRGVPLITVLFMASVM 200

Query: 152 VLSV 155
           +   
Sbjct: 201 LPLF 204


>gi|228919496|ref|ZP_04082860.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228840139|gb|EEM85416.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 214

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   LI  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGIL-------RYTKIPVVSQVLGVIVELIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFILVACMYFIVNYSLSILSRRLELR 214



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VE+ RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVELIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|123443208|ref|YP_001007182.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|332160866|ref|YP_004297443.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|122090169|emb|CAL13032.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|325665096|gb|ADZ41740.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863398|emb|CBX73520.1| glutamate/aspartate transport system permease protein gltK
           [Yersinia enterocolitica W22703]
          Length = 224

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +   AKI + + V GIV       + R    K        Y
Sbjct: 1   MYEFDWSSIAPSLPYLLQGLAVTAKITLIAIVFGIVWGTVL-AVMRLSPVKAISWFATAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNVFRSIP---LVMVLLWFYL--VVPSLLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E++L    +Y  +S   ++ +N L  +
Sbjct: 175 LSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISFSASMLVNYLKKR 222



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S +     +L G   T  +    ++   + GT++   RLS  K ++W    YV VFR
Sbjct: 5   DWSSIAPSLPYLLQGLAVTAKITLIAIVFGIVWGTVLAVMRLSPVKAISWFATAYVNVFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           +IP ++V+ + Y  V S+
Sbjct: 65  SIPLVMVLLWFYLVVPSL 82


>gi|227823732|ref|YP_002827705.1| putative amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Sinorhizobium fredii NGR234]
 gi|227342734|gb|ACP26952.1| putative amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Sinorhizobium fredii NGR234]
          Length = 273

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 8/213 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLI 229
           L    +T+      F  + +LG+ ++L A       R    F+ +  + +P+L +  ++ 
Sbjct: 47  LKGLGVTVFVTLVGFALATLLGLGVALMALSEHPALRQIARFYTEVIRGVPILVLLFYIA 106

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           F     +++A+ +       +   F                IAL    +AFIAE+ R+G+
Sbjct: 107 FVGAPALVVAVNFLA--APLITWGFMEPLVVRDISLMWRAIIALMIGYSAFIAEVFRAGI 164

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V +GQ+EAA  LGLT  +  RLV+ PQA+R I+PPL + ++ ++K+SSL   +G AD+
Sbjct: 165 QSVDKGQVEAAKTLGLTRYQRFRLVVFPQAIRVILPPLGNDFVAMVKDSSLVSVLGVADI 224

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             +G    + + +  E   I  ++YL L+I ++
Sbjct: 225 TQMGKVYASGSFRFFETYSIVAYVYLILTIGLS 257



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T +L G   T ++   G   AT++G  V    LS +  +  I R Y EV R +P LV++
Sbjct: 43  FTVVLKGLGVTVFVTLVGFALATLLGLGVALMALSEHPALRQIARFYTEVIRGVPILVLL 102

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           F++       L +  + +  P   +     L    +++   A I +
Sbjct: 103 FYIAFVGAPALVVAVNFLAAPLITWGFMEPLVVRDISLMWRAIIAL 148


>gi|284032616|ref|YP_003382547.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283811909|gb|ADB33748.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 289

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 17/263 (6%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N+  L ++      ++  L          +  F            +    +    + VL 
Sbjct: 21  NVIVLALLAAGILWLVLRLNSTGQFEGRRWAQFQYTAIQEQLLTGLLNTLRAAGAATVLA 80

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++        +R    +  +      +  F    +P L+L+   Y    +  +       
Sbjct: 81  LIFG-AVFAAARISDHRWLRVPATFVVELF--RAIPLLILMFFFYYGSLEFELGL----- 132

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   F ++   L+ Y  + +AEI R+G+ AVP+GQ EAA A GL   +  RLVLLP
Sbjct: 133 ------SPFHAVVFGLTLYNGSVLAEIFRAGIAAVPKGQREAAYATGLRKNQVVRLVLLP 186

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA+R+++P + SQ + LLK+++L   + + +L+ V   +  +       I   ++   IY
Sbjct: 187 QAIRAMLPAIVSQLVVLLKDTALGFIITYNELLYVAKQMGGRLEFGFPYIPTYIVIAVIY 246

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           + L  +++L    L  +     K
Sbjct: 247 IGLCSLLSLLARYLEGRSRRSRK 269



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 60/152 (39%), Gaps = 18/152 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            +  N  + +I+  LL    LW V  + +  +              A F+          
Sbjct: 13  AKARNRILNVIVLALLAAGILWLVLRLNSTGQFEG--------RRWAQFQY--------- 55

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    +L G +NT   A +  + A I G +  A R+S ++ +       VE+FR IP 
Sbjct: 56  -TAIQEQLLTGLLNTLRAAGAATVLALIFGAVFAAARISDHRWLRVPATFVVELFRAIPL 114

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           L+++FF Y   L           + FG+ L N
Sbjct: 115 LILMFFFYYGSLEFELGLSPFHAVVFGLTLYN 146


>gi|124265638|ref|YP_001019642.1| amino acid permease [Methylibium petroleiphilum PM1]
 gi|124258413|gb|ABM93407.1| amino acid permease [Methylibium petroleiphilum PM1]
          Length = 222

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 112/236 (47%), Gaps = 15/236 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            + L F     +    F    +  + ++ + + V GIVL      L R   +K       
Sbjct: 1   MLNLDFSFLNWDVVSGFVLKGLVFSVQLTLIAMVGGIVLGTLL-ALMRLSGKKWLVVPAA 59

Query: 222 LYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            Y++T     L   ++   L   L   +P+  +             +S  I  + + AA+
Sbjct: 60  FYVNTLRSIPLVMVILWFFLLIPLLIGRPMGAE-------------LSAIITFTVFEAAY 106

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI+R+G+ +VP+GQ+ A  A+G+T+ ++ +L++LPQA R+++P L +Q + L +++SL
Sbjct: 107 YSEIMRAGIQSVPKGQVYAGYAVGMTYSQSMQLIVLPQAFRNMLPVLMTQTIILFQDTSL 166

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             A+G  DL+           + +E  L+   +Y  +   +++ + RL  KIA+  
Sbjct: 167 VYAIGAYDLLKGFEVAGKNFNRPVETYLVAAVVYFVICFSLSMLVRRLQKKIAIIR 222



 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 34/70 (48%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G V +  L    M+   ++GTL+   RLS  K +      YV   R+IP ++VI + +
Sbjct: 19  LKGLVFSVQLTLIAMVGGIVLGTLLALMRLSGKKWLVVPAAFYVNTLRSIPLVMVILWFF 78

Query: 150 KSVLSVLPIP 159
             +  ++  P
Sbjct: 79  LLIPLLIGRP 88


>gi|291457061|ref|ZP_06596451.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Bifidobacterium
           breve DSM 20213]
 gi|291380896|gb|EFE88414.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein, His/Glu/Gln/Arg/opine family [Bifidobacterium
           breve DSM 20213]
          Length = 262

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + ++S ++ ++ ++              K L ++ I+TF+      + L+   Y +  
Sbjct: 23  ITLTLWSMLVALLFAVACGAFI-LVRIPVLKQL-VIVINTFIKGVPLVIQLLFCYYAVPI 80

Query: 247 DKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
               L  F  +       P F +  +AL     A+I ++V S + A+  GQ+EA  A G+
Sbjct: 81  VAKGLDGFLGYHFDPRNPPYFPAAVLALGLNFGAYITDVVVSSVRAIDHGQIEAGKACGM 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
             R+    +LLPQ +   IP + + ++ LLK +S+A  VG A+L+       +Q    +E
Sbjct: 141 RRREIIWHILLPQVVVVSIPDMGNYFIWLLKGTSVASLVGVAELLGTAKISASQNYDFLE 200

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             L+   +Y  + ++    +N L A++ 
Sbjct: 201 AYLVAALLYWVVCVVAEWLLNLLYARLG 228


>gi|209547542|ref|YP_002279460.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538786|gb|ACI58720.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 13/189 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K+ K L   YI  F   G P L+ + + +           F         P +++
Sbjct: 42  RISKRKSFKVLAKYYIELF--QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ ++AAF+AEI R  + ++ R Q EA+ +LG+   +  R V+LPQA+R  IPP  
Sbjct: 89  AGLTLTLWSAAFLAEIWRGCVESIARSQWEASASLGMGRLQQMRYVILPQALRVAIPPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K ++L   +GF +L   G  + N T Q   +  +   IY +L   ++     L
Sbjct: 149 GFSVQIIKGTALTSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQIL 208

Query: 389 NAKIALKEK 397
             K+ +  +
Sbjct: 209 ERKLNVAHR 217


>gi|187919540|ref|YP_001888571.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717978|gb|ACD19201.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 250

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R             YI  F   G P L+ + L Y        +GQF  I  S + P    
Sbjct: 44  RVSPHWLPNRFARAYILVF--RGSPLLIQMFLVYY------GMGQFGVIRESFLWPVLRE 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            +M   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+     R V+ P A+R  +
Sbjct: 96  PYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ +I   
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVIVRL 215

Query: 385 MNRLNAKIALKEK 397
           +  L  +++   +
Sbjct: 216 LGMLETRLSRHLR 228



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L F  +I   ++  ++   R+S + L     R Y+ VFR  P L+ +F +
Sbjct: 15  LLAAVPTTLGLFFCSLILGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLV 74

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  +     I +  +  
Sbjct: 75  YYGMGQFGVIRESFLWP 91


>gi|305432078|ref|ZP_07401245.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|304445162|gb|EFM37808.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 272

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 114/251 (45%), Gaps = 18/251 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV+IF L         +  +       +   N+ +     T+  +    + S  LGI++ 
Sbjct: 38  LVLIFILSLFFYFSFSVSAYHFNFVSLLEYKNKIIYGFFQTLSVSFFALICSIFLGIIIC 97

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
            F+            +    LY+   LI G P LV + L + +  +              
Sbjct: 98  FFS-----LSKIIILRFFATLYVE--LIRGTPLLVQVLLVFYIIANS-----------LG 139

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               ++     LS ++AA+++EI R+G+++VP  Q+E+A ALGL+ R+    ++ PQA++
Sbjct: 140 FDDRYIVGIFILSMFSAAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIK 199

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +I+ P++ Q  NL+K+SSL   +   +L      + +     +E  ++  F YL L++ I
Sbjct: 200 NILAPISGQLANLIKDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILTLPI 259

Query: 382 ALFMNRLNAKI 392
            +F   L  K 
Sbjct: 260 GVFSRYLERKY 270



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 44/100 (44%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F +      + S   Y   I+ GF  T  ++F  +I +  +G ++    LS   ++ +
Sbjct: 50  FSFSVSAYHFNFVSLLEYKNKIIYGFFQTLSVSFFALICSIFLGIIICFFSLSKIIILRF 109

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
              +YVE+ R  P LV +  ++  + + L   D  IV  F
Sbjct: 110 FATLYVELIRGTPLLVQVLLVFYIIANSLGFDDRYIVGIF 149


>gi|251788516|ref|YP_003003237.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537137|gb|ACT05758.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 218

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              F +   +    L       + + +F  G V++L    L         +   L  +  
Sbjct: 1   MMTFTDWDIVRNLLLAGRWTVLLSLAAFFGGAVVTLPLLLLRLTKRRWPMR---LTRLYA 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +  G P L+ + L +           F           + +  +AL+ +T+AF+ +I  
Sbjct: 58  DVFQGTPLLMQLFLAF-----------FGLGLFGIDVSPWTAAALALTLFTSAFLVDIWH 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+PRGQ EA   LGLT  +    V+ PQAMR  I P     + ++K ++LA  +GF
Sbjct: 107 GSVQALPRGQWEACRCLGLTFTQTLTRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGF 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 167 VELTKAGTMLNNVTYQPFKVFGLVALGYFLLCYPLSYYSRYLEKKF 212


>gi|152971235|ref|YP_001336344.1| histidine and lysine/arginine/ornithine ABC transporter membrane
           protein [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|206578110|ref|YP_002237302.1| histidine ABC transporter, permease protein HisM [Klebsiella
           pneumoniae 342]
 gi|238895826|ref|YP_002920562.1| histidine transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288934236|ref|YP_003438295.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290508439|ref|ZP_06547810.1| histidine transport system permease [Klebsiella sp. 1_1_55]
 gi|329997345|ref|ZP_08302728.1| histidine transport system permease protein HisM [Klebsiella sp. MS
           92-3]
 gi|150956084|gb|ABR78114.1| histidine and lysine/arginine/ornithine transport protein (ABC
           superfamily, membrane) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|206567168|gb|ACI08944.1| histidine ABC transporter, permease protein HisM [Klebsiella
           pneumoniae 342]
 gi|238548144|dbj|BAH64495.1| histidine transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288888965|gb|ADC57283.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777833|gb|EFD85830.1| histidine transport system permease [Klebsiella sp. 1_1_55]
 gi|328539094|gb|EGF65130.1| histidine transport system permease protein HisM [Klebsiella sp. MS
           92-3]
          Length = 238

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++F   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLISSVVMGGILAVFL-AIGRVSSNKFIQFP--IWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++     +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTELL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 AGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|330812667|ref|YP_004357129.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380775|gb|AEA72125.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 260

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 18/253 (7%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            ++   F     L    I D    L       N  L    LT+       V S +LG + 
Sbjct: 19  LVLFASFFLSFDLKFSIILDKLPNLLGMHLAPNGFLQGAVLTLFLCLCSIVASSLLGFI- 77

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
               T L+R         +   Y S F    L          Q+      L Q   + G+
Sbjct: 78  ----TALARLSSSAVAFGIASFYASFFRGTPLLI--------QILLIYLGLPQLGVVPGA 125

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +  IALS    A+++EI R+G++ VP GQ EA++ALGL+       V LPQAM
Sbjct: 126 I-----AAGIIALSLNYGAYLSEIFRAGILGVPNGQREASLALGLSETVIFWRVTLPQAM 180

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++     IY  +SI 
Sbjct: 181 RTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAIIYWLMSIA 240

Query: 381 IALFMNRLNAKIA 393
           + L   R+     
Sbjct: 241 LELIQARMERHYG 253



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G V T +L    ++ ++++G +    RLS++ +   I   Y   FR  P L+ I  +
Sbjct: 53  FLQGAVLTLFLCLCSIVASSLLGFITALARLSSSAVAFGIASFYASFFRGTPLLIQILLI 112

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +  +P         + LN 
Sbjct: 113 YLGLPQLGVVPGAIAAGIIALSLNY 137


>gi|170695394|ref|ZP_02886540.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139794|gb|EDT07976.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 246

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 8/222 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS   +T+  +   +V + ++G +  +      R    K    +  LY++ F    +P
Sbjct: 25  WLLSGFWVTITVSLSAWVIALIVGSLFGVL-----RTVPNKWASGIGTLYVAIF--RNIP 77

Query: 234 TLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V   + Y  +    P      F      +  F S  I L  +TAA + E VRSG+ A+
Sbjct: 78  LIVQFFIWYLVIPELLPASIGNWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINAL 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS++A  +G  DL + 
Sbjct: 138 PRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQ 197

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +++ T Q  E  +     Y+ +++++  FM  + AK  L
Sbjct: 198 ARQLVDYTSQTYESFIAVTLAYVLINLVVMQFMRWVEAKTRL 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 45/94 (47%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L GF  T  ++ S  + A I+G+L G  R   NK  + I 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGFWVTITVSLSAWVIALIVGSLFGVLRTVPNKWASGIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            +YV +FRNIP +V  F  Y  +  +LP    + 
Sbjct: 67  TLYVAIFRNIPLIVQFFIWYLVIPELLPASIGNW 100


>gi|317491135|ref|ZP_07949571.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920682|gb|EFV42005.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 224

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI + + V GI+       + R    K       LY
Sbjct: 1   MYEFDWSSIVPSLPYLMNGMVITLKITLIAVVFGIIWGTIL-AVMRLSSFKLISWFATLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSLLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V +GQ  A++ALG+TH ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSVSKGQSGASLALGMTHWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL   F+Y  +S+  +  +N L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFIISLAASALVNYLKKR 222



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 40/68 (58%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G V T  +    ++   I GT++   RLS+ KL++W   +YV +FR++P ++V+ +
Sbjct: 15  YLMNGMVITLKITLIAVVFGIIWGTILAVMRLSSFKLISWFATLYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVLSV 155
            Y  V S+
Sbjct: 75  FYLVVPSL 82


>gi|307727658|ref|YP_003910871.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588183|gb|ADN61580.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 251

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R             YI  F   G P L+ + L Y        +GQF  I  S + P    
Sbjct: 44  RVSPHWLPNRFARAYILVF--RGSPLLIQMFLVYY------GMGQFGVIRESFLWPVLRE 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+     R V+ P A+R  +
Sbjct: 96  PYLCAVLSLALCTAGYTAEIIRGGLMAVPAGQIEAGYSIGLSGFALLRRVIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ +I   
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVIVRA 215

Query: 385 MNRLNAKIALKEK 397
           +  L  +++   +
Sbjct: 216 LGLLETRLSRHLR 228



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 33/80 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L     T  L F  +I   ++  ++   R+S + L     R Y+ VFR  P L+ +
Sbjct: 12  LRQLLAAVPTTLGLFFCSLILGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQM 71

Query: 146 FFLYKSVLSVLPIPDHSIVL 165
           F +Y  +     I +  +  
Sbjct: 72  FLVYYGMGQFGVIRESFLWP 91


>gi|229165585|ref|ZP_04293360.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH621]
 gi|228617892|gb|EEK74942.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH621]
          Length = 214

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 111/217 (51%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +          +  G          F++  +  L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILG----------FIVEVIRNL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P +G    I          +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 66  PLLLIIFFTYFALPEVGLKLEI--------ITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFILAACMYFVVNYGLSILSRRLEIR 214



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ I    VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++  V
Sbjct: 68  LLIIFFTYFALPEV 81


>gi|237751712|ref|ZP_04582192.1| amino acid ABC transporter ATP-binding protein [Helicobacter bilis
           ATCC 43879]
 gi|229373078|gb|EEO23469.1| amino acid ABC transporter ATP-binding protein [Helicobacter bilis
           ATCC 43879]
          Length = 234

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 102/230 (44%), Gaps = 17/230 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F   L++  L+    ++     +      +GIV+ +    L R    +    L   
Sbjct: 18  FYFTFPYGLSSADLNATFKSIGITLILTTGGVFIGIVVGVLLAFL-RMLQIRILNFLIDE 76

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   ++ G P L+ + +   + F             +T++  F++  +A+   ++A+IA
Sbjct: 77  YID--ILRGTPLLIQLLVFAYIVF-------------ATLNDNFLAALVAIGLNSSAYIA 121

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ +V +GQM+A  A+GLTH    R +++PQA+++I+P L ++++ + K +S+  
Sbjct: 122 EIVRAGIQSVDKGQMDAGRAMGLTHSATMRHIIMPQAIKNILPSLANEFIVVFKETSVVG 181

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   DL      +           +     Y     + +     L  ++
Sbjct: 182 LISVNDLTMQAKALQAVLYNPTP-YIFAGVFYYMCVKIFSWLTKLLEREL 230



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 38/92 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           PY   S+   A       T  L   G+    ++G L+   R+   +++ ++   Y+++ R
Sbjct: 23  PYGLSSADLNATFKSIGITLILTTGGVFIGIVVGVLLAFLRMLQIRILNFLIDEYIDILR 82

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
             P L+ +      V + L     + ++  G+
Sbjct: 83  GTPLLIQLLVFAYIVFATLNDNFLAALVAIGL 114


>gi|322833420|ref|YP_004213447.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168621|gb|ADW74320.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 231

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 7/237 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F   L  +        M    K+ + S++L + ++L    + R  H++  +     
Sbjct: 1   MTLDFSKVLTGQFGQMIVDGMVVTLKLALGSWLLAMCIALLLVVI-RLTHKRAAEYFVRA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           Y+S      +PTL+ + + Y   F  P +L +   +  +  + EF+    AL    AA+ 
Sbjct: 60  YVS--YHRNVPTLIQLMMWY---FAIPTLLPESVQMWINDFNAEFLFSMFALGLCQAAYF 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +RSGL A+P GQ EA+ ALG+++ ++ R V+LPQ +R+ +P L +  + L KN+SLA
Sbjct: 115 SEDIRSGLRAIPEGQTEASRALGMSYTRSLRSVILPQGIRNALPSLLNHTVLLFKNTSLA 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +G A+L  V   I NQT +  E  L+    YL  S+++      L  +      +
Sbjct: 175 MVIGVAELTYVTRDIENQTFRTFESYLVASAGYLFFSLLLMGAGALLARRFQRAYAR 231



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 37/86 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   I+ G V T  LA    + A  I  L+   RL+  +   +  R YV   RN+P 
Sbjct: 10  TGQFGQMIVDGMVVTLKLALGSWLLAMCIALLLVVIRLTHKRAAEYFVRAYVSYHRNVPT 69

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L+ +   Y ++ ++LP      +  F
Sbjct: 70  LIQLMMWYFAIPTLLPESVQMWINDF 95


>gi|296160743|ref|ZP_06843557.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295889046|gb|EFG68850.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 251

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 12/193 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R             YI  F   G P L+ + L Y        +GQF  I  S + P    
Sbjct: 44  RVSPHWLPNRFARAYILVF--RGSPLLIQMFLVYY------GMGQFGVIRESFLWPVLRE 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            +M   ++L+  TA + AEI+R GL+ VP GQ+EA  ++GL+     R V+ P A+R  +
Sbjct: 96  PYMCAVLSLALCTAGYTAEIIRGGLMTVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ +I   
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVIVRL 215

Query: 385 MNRLNAKIALKEK 397
           +  L  +++   +
Sbjct: 216 LGLLETRLSRHLR 228



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L F  +I   ++  ++   R+S + L     R Y+ VFR  P L+ +F +
Sbjct: 15  LLAAVPTTLGLFFCSLILGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLV 74

Query: 149 YKSVLSVLPIPDHSIVL 165
           Y  +     I +  +  
Sbjct: 75  YYGMGQFGVIRESFLWP 91


>gi|323527326|ref|YP_004229479.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323384328|gb|ADX56419.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 246

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                   ++ P         L +          + + ++V+ +++  F   L R    K
Sbjct: 2   SYHWNWGILLSPVSTGEPTTYLGWLLSGFWVTITVSLSAWVIALIVGSFFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
               +  +Y++ F    +P +V     Y  +    PV     F      +  F +  I L
Sbjct: 61  WASGIGTVYVAIF--RNIPLIVQFFTWYLVIPELLPVSIGNWFKQLPPGAQFFSASIICL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +TAA + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTAARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M  + A+  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTLAYVLINLVVMQLMRWVEARTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 45/94 (47%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L GF  T  ++ S  + A I+G+  G  R   NK  + I 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGFWVTITVSLSAWVIALIVGSFFGVLRTVPNKWASGIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            VYV +FRNIP +V  F  Y  +  +LP+   + 
Sbjct: 67  TVYVAIFRNIPLIVQFFTWYLVIPELLPVSIGNW 100


>gi|170694567|ref|ZP_02885719.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140449|gb|EDT08625.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 229

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +AL   Y  T LI  +P LVL+ L +                       F++
Sbjct: 39  KLSLNRPLRALATGY--TTLIRSVPDLVLMLLLFYSIQIAVNNLTDALDVAQFDIDPFVA 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + 
Sbjct: 97  GVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGVRVFARILFPQMMRFALPGIG 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T      ILI   IYL+L+ +  L +  L
Sbjct: 157 NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLALTTVSNLALIWL 216

Query: 389 NAKIALKEKK 398
             + ++  + 
Sbjct: 217 ERRYSIGVRH 226


>gi|167855354|ref|ZP_02478121.1| arginine ABC transporter, permease [Haemophilus parasuis 29755]
 gi|167853502|gb|EDS24749.1| arginine ABC transporter, permease [Haemophilus parasuis 29755]
          Length = 223

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 1/184 (0%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T K   +   +T ++  L  L  I + + ++F  P + +    G       F    +AL
Sbjct: 38  ETHKWTMVRKPTTVVVALLRGLPEILVVFLIYFGAPEVLEM-ITGEYVELGAFGCGVVAL 96

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S   A++ ++ +R  + A+P GQ E+  ALGL+       +++PQ  R  +P L++Q+L 
Sbjct: 97  SIIFASYASQSLRGAIQAIPLGQWESGAALGLSRGYTFVNIVMPQVWRHALPGLSNQWLV 156

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK+++L   +G  D++     I   T Q          IYL ++++  + + +L  +  
Sbjct: 157 LLKDTALVSLIGVHDIMRQTELINTSTHQPFTWYGTAALIYLGVTLVSQVIIRKLELRFT 216

Query: 394 LKEK 397
             E+
Sbjct: 217 RFER 220


>gi|157369721|ref|YP_001477710.1| glutamine ABC transporter permease [Serratia proteamaculans 568]
 gi|157321485|gb|ABV40582.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 219

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 98/188 (52%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +       + L++I   +I G P +V +   Y   F  P+               F
Sbjct: 42  FARTYGGWIANHVALVFIE--VIRGTPIVVQVMFIY---FALPMAF------SDLRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R+  R V++P A+R ++PP
Sbjct: 91  SAAVVTIMINSGAYIAEITRGAVLSIHSGFREAGLALGLSRRETIRYVIMPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVLR 210

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 211 RLERRMKI 218


>gi|282849423|ref|ZP_06258808.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
 gi|282581127|gb|EFB86525.1| ABC transporter, permease protein [Veillonella parvula ATCC 17745]
          Length = 238

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +    +        +     I V S +LG++L      + R         L +++IS
Sbjct: 4   YFDVSYMIQAFPQLLNYVHVTVLITVISAILGVILGSII-AIIRLKKVPVLNQLFIVFIS 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV + L Y   F  P +     +    V P  + +Y   + + AA+ AEI+
Sbjct: 63  F--MRGTPFLVQLFLIY---FGVPEIMSHMGLNMKNV-PGLVFVYAVFTLHIAAYSAEIM 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RS + AV  G+ EAA +LG+T  ++   ++LPQA    IPPLT+  + +LK ++L   VG
Sbjct: 117 RSSIDAVSPGEKEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D++     +   + + +E+ +    IY  L I+++L    L  +  +  K+
Sbjct: 177 VVDMMRKADLMGGNSQRYLELFVDAAIIYGILIIIVSLLGRLLEKRFTVAGKE 229



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +     I   I+G+++   RL    ++  +  V++   R  P LV +F +Y  V  +
Sbjct: 24  TVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVFISFMRGTPFLVQLFLIYFGVPEI 83

Query: 156 LPIPDHSIVLPFGMFL 171
           +     ++    G+  
Sbjct: 84  MSHMGLNMKNVPGLVF 99


>gi|170696519|ref|ZP_02887643.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170138566|gb|EDT06770.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 218

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F          L       + + +FV G V  L    + R       + + +LY+  F  
Sbjct: 4   FTLWDIARNLLLAARWTVLLSLIAFVGGGVFGLILLAM-RVSPIAWLRRIVVLYVEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P++              +++  + L+ YT+A++ +I R  +
Sbjct: 61  QGTPLLMQLFLAF---FGLPLV--------GVDVSPWVAATVTLTLYTSAYLVDIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ  A  +LG+T  +  R ++ PQA++  + P     + ++K+++LA  +GF +L
Sbjct: 110 EAVPRGQWAAGASLGMTFAQQLRYIVWPQALKIAVAPTVGFLVQVVKSTALASIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  I N   +   I  +   IY ++   +  +   L  +  + + +
Sbjct: 170 TKTGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVLEKRNKVGQHR 218



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 37/105 (35%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L+    T  L+    +   + G ++ A R+S    +  I  +YVEVF+  P L
Sbjct: 7   WDIARNLLLAARWTVLLSLIAFVGGGVFGLILLAMRVSPIAWLRRIVVLYVEVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  V       +     + L               A
Sbjct: 67  MQLFLAFFGLPLVGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111


>gi|308175099|ref|YP_003921804.1| cystine ABC transporter permease [Bacillus amyloliquefaciens DSM 7]
 gi|307607963|emb|CBI44334.1| cystine ABC transporter (permease) [Bacillus amyloliquefaciens DSM
           7]
          Length = 240

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 6/190 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +       +  LYIS F   G P +V + + +   +  P L     I  S + P   +
Sbjct: 46  RIYRIPVLNQIAKLYISFF--RGTPIMVQLFIVF---YGIPALTALAGIDTSKMDP-LYA 99

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
                   +AA  AEI+R G+ +V RGQ EAA ++GL   +  R ++LPQA+    P + 
Sbjct: 100 AIATYVLSSAARAAEIIRGGVNSVDRGQAEAAFSIGLNGVQTFRRIILPQALVQAFPNIG 159

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  +  LK++SLA ++G  D+   G T+I  +  ++E+ +    +Y + +++        
Sbjct: 160 NMVIGFLKDTSLAFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLYYAAALLFECVFRWC 219

Query: 389 NAKIALKEKK 398
             +I   E +
Sbjct: 220 EKRIKKDETR 229


>gi|317057053|ref|YP_004105520.1| polar amino acid ABC transporter inner membrane subunit
           [Ruminococcus albus 7]
 gi|315449322|gb|ADU22886.1| polar amino acid ABC transporter, inner membrane subunit
           [Ruminococcus albus 7]
          Length = 227

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 109/238 (45%), Gaps = 15/238 (6%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           ++ + +        + +  + +S    +        +F+  LG++++       R    K
Sbjct: 1   MMILAEQMGTFEKLLDVCQKLMSGVGASFMIFFLTLLFALPLGMLIAF-----GRMSKFK 55

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
               L  LYIS  ++ G P ++ + + +   +       + F   ++    F ++ I  S
Sbjct: 56  PLSLLVKLYIS--IVRGTPLMLQLLVVFFGPY-------YLFGMRTSSEYRFYAVIIGFS 106

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ AEI R+G+ AVP+GQ EA   LG +  +    ++ PQ M++IIP +T++ + L
Sbjct: 107 LNYAAYFAEIYRAGIQAVPKGQHEACEILGYSKSQKFFKIVFPQMMKNIIPAITNEVITL 166

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K++SLA A+ + ++ +V   +       I  + +    Y   +  +A  M  +  K+
Sbjct: 167 VKDTSLAFAIAYTEMFTVAKQVAAA-QSTIMPLFVAGLFYYVFNFFVAFVMEFIEKKM 223



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 42/101 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   +F + F  ++ A  +G L+  GR+S  K ++ + ++Y+ + R  P ++ +  +
Sbjct: 21  LMSGVGASFMIFFLTLLFALPLGMLIAFGRMSKFKPLSLLVKLYISIVRGTPLMLQLLVV 80

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +     +  +   S    + + +               A I
Sbjct: 81  FFGPYYLFGMRTSSEYRFYAVIIGFSLNYAAYFAEIYRAGI 121


>gi|257867389|ref|ZP_05647042.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257873720|ref|ZP_05653373.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257801445|gb|EEV30375.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257807884|gb|EEV36706.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 226

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 17/234 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             +    + L    L +    +     I V SF+ G VL +  T L         +    
Sbjct: 1   MYIPTLDLPLMWESLPYLLSGLSYTVGIAVVSFLGGNVLGIMLTFLG-MLENPIIRGFVR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+S   + G+P LVL+ L Y               G         +  I  +  ++AFI
Sbjct: 60  GYLSF--LRGVPALVLLFLLY--------------FGLPYQLSALSAAIICFTLTSSAFI 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI R  +  V RGQ +AA ALGL+  K  RL++LPQA R  +P L++  ++LLK +SLA
Sbjct: 104 GEIYRGSIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   D+      +  +T   + + ++   IY  L I+I     RL    + +
Sbjct: 164 AMITIPDIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLEQHFSKR 217


>gi|311278732|ref|YP_003940963.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308747927|gb|ADO47679.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 238

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G VL+LF   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLISSVVMGGVLALFL-AIGRVSSNKYIQF--PIWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++     +  +          +AL+  T A+  EI    + AVP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTELL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRAVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 AGEVEAARAYGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S  +     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYGLISLFRKAEKR 227


>gi|258626821|ref|ZP_05721628.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|262171175|ref|ZP_06038853.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           mimicus MB-451]
 gi|258580868|gb|EEW05810.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|261892251|gb|EEY38237.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           mimicus MB-451]
          Length = 246

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 89/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------------- 248
               L++    +  + +  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARWIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNGLSSFNEFLNQ 91

Query: 249 ------PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFTERDPNHEWVSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  IP   + +L LLK ++L   +G  D+V +       T  
Sbjct: 152 YGMSSSMSFRRILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  + ++  +
Sbjct: 212 PFTFYMAVAIIFLFFTSVSTGLLKLIERRFSIHTR 246



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A ++G L    +++  +   WI  +Y  + R IP LV+
Sbjct: 7   YEASIAKGALVTIEVALLSLLLAVVLGMLGALAKMAPYRWARWIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYK--------SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S     +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNGLSSFNEFLNQWFTERDPNHEWVSYLPDYIDVSPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|213967200|ref|ZP_03395349.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301381064|ref|ZP_07229482.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302061561|ref|ZP_07253102.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|213928042|gb|EEB61588.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331018098|gb|EGH98154.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 277

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 69  GFLQGAALTLFVSVCSIVVSVLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 128

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 129 IYLGLPQLGIVPGAIAAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIF 188

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 189 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 248

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 249 VLYWIMSIGLELLQSRLEKHYG 270


>gi|53715883|ref|YP_106604.1| glutamine ABC transporter permease protein [Burkholderia mallei
           ATCC 23344]
 gi|53723353|ref|YP_112338.1| glutamine ABC transporter permease protein [Burkholderia
           pseudomallei K96243]
 gi|76817724|ref|YP_336643.1| glutamine ABC transporter permease [Burkholderia pseudomallei
           1710b]
 gi|254356207|ref|ZP_04972484.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           2002721280]
 gi|52213767|emb|CAH39822.1| glutamine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|52421853|gb|AAU45423.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|76582197|gb|ABA51671.1| glutamine ABC transporter, permease protein [Burkholderia
           pseudomallei 1710b]
 gi|148025190|gb|EDK83359.1| glutamine ABC transporter, permease protein [Burkholderia mallei
           2002721280]
          Length = 218

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I  F    G ++ + A  + R +       L  +YI
Sbjct: 1   MQFDWSAIWAALPDLMDGVRLTVFIAFFGLAGGFLVGMIAG-MFRAYGPAVLNVLAQVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +     L+F  P+L      G S       +  +A++  + A++AE+
Sbjct: 60  E--LIRGTPIVVQVMF---LYFALPLLAHVRIDGLS-------AAVVAITLNSGAYLAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++P+G  EA +A+GL+  +    ++ P A R +I PL +Q +  LK++SL + +
Sbjct: 108 VRGALLSIPKGLTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  II    QA+EI      IYL L+ ++ L +  +  ++ +
Sbjct: 168 GVGELTRKGQEIIAGNFQAVEIWTAVAAIYLVLTGVMTLTLRFVEKRMRI 217


>gi|50121082|ref|YP_050249.1| putative ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49611608|emb|CAG75056.1| putative ABC transporter, permease [Pectobacterium atrosepticum
           SCRI1043]
          Length = 314

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 110/264 (41%), Gaps = 1/264 (0%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR    L  +F     + S+   P     +    F N   L+    T+   A   + S  
Sbjct: 31  FRFAGALFSLFIFAGIIQSIALNPRWEWSVFAEWFFNPVILAGLGQTLLLTALGTLLSIF 90

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQF 254
            G  L+L     S      +   + L      ++  +       L  +L    P     F
Sbjct: 91  FGTALALARLSPSYLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGIPFTSIIF 150

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  +  +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL   + T  +
Sbjct: 151 LRYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGGRRTVRI 210

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++    Y
Sbjct: 211 ILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWY 270

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ ++++    +   ++    +
Sbjct: 271 LLITTVLSIVQYYVERYVSRGAVR 294


>gi|312142894|ref|YP_003994340.1| polar amino acid ABC transporter, inner membrane subunit
           [Halanaerobium sp. 'sapolanicus']
 gi|311903545|gb|ADQ13986.1| polar amino acid ABC transporter, inner membrane subunit
           [Halanaerobium sp. 'sapolanicus']
          Length = 220

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I + S   G +L +F   L + +  K        +I   +I G P LV + + Y  
Sbjct: 18  VTIMITLISCTSGTILGIFL-SLGKIYGNKLISRTVTAFI--AVIRGTPLLVQLFIIYY- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  I+    + A+ AE +R  + +V  GQ++AA++LG
Sbjct: 74  ----------GLPAYGIRFAPITAAVISFIINSGAYQAEYLRGSIQSVSSGQLKAALSLG 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T       V+LPQA+R +IP  T++++ ++K SSLA  +G  +L++ G  I ++  Q  
Sbjct: 124 MTKWMGIIYVVLPQALRRVIPAWTNEFIYMIKYSSLAYVIGAKELMTEGKLIASRNYQFF 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + ++   IYL + I+     N+   K+A+
Sbjct: 184 NVYMVVALIYLVVIIIFVYLFNKFEKKVAI 213


>gi|289624564|ref|ZP_06457518.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|330866226|gb|EGH00935.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. aesculi str. 0893_23]
          Length = 225

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 10/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + +I G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  ++    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LLAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL ++  +      L  + ++  +
Sbjct: 190 EPFTFFLAVAAMYLVITSAL----RYLEKRYSVGVR 221



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVIRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|226224893|ref|YP_002759000.1| amino acid ABC-transporter (permease) [Listeria monocytogenes
           Clip81459]
 gi|225877355|emb|CAS06069.1| Putative amino acid ABC-transporter (permease) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 238

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 7/232 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +       L  +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLL-SLPRIYKIPVLDQLVRVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSIVGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL+ R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  +  +
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKWIEKRVKKENTR 229



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 35/75 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G L+   R+    ++  + RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVLLSLPRIYKIPVLDQLVRVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             I    +     ++
Sbjct: 84  SSIVGIDLSQMDPLY 98


>gi|220911892|ref|YP_002487201.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219858770|gb|ACL39112.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 233

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 15/211 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   I   + V   VL      L R    +  +     Y+  F    L  L L    Y  
Sbjct: 23  TTLGIVAAAIVCATVLGYVIATL-RLSRVRALRIFAAAYVWFFRGLPL-MLSLFFFYYTK 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F                   F +  IA+S  +A+F +EI+R+GL +V  G +EAA ++G
Sbjct: 81  PFGL-------------TMDAFTAGLIAMSLNSASFFSEIIRAGLKSVNAGHLEAADSVG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +    V  P+ +R + PP  +  + +LK S+    +   DL+  G    N T   +
Sbjct: 128 MNPLQKFVRVTAPEGIRLMTPPYINNCIIMLKESAQISVITVPDLMLQGQKAYNSTYNVM 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E + +   +YL ++ ++ +    +  K+  K
Sbjct: 188 ETLGVVAAMYLVMTSLLMVLQLVIEKKMGRK 218



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 33/66 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G + T  +  + ++ AT++G ++   RLS  + +      YV  FR +P ++ 
Sbjct: 13  YFPIFLAGALTTLGIVAAAIVCATVLGYVIATLRLSRVRALRIFAAAYVWFFRGLPLMLS 72

Query: 145 IFFLYK 150
           +FF Y 
Sbjct: 73  LFFFYY 78


>gi|154253426|ref|YP_001414250.1| polar amino acid ABC transporter inner membrane subunit
           [Parvibaculum lavamentivorans DS-1]
 gi|154157376|gb|ABS64593.1| polar amino acid ABC transporter, inner membrane subunit
           [Parvibaculum lavamentivorans DS-1]
          Length = 369

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 27/266 (10%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N+  L++++ L   VL     P    V                +T+       V S  LG
Sbjct: 126 NLVLLLIVYPLVAIVLLAGDRPGLPPVPT-------SEWGGLLVTLVVAVTGIVASLPLG 178

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++L+L      R       + L +++I  +    L T++ +A           +    F+
Sbjct: 179 VLLAL-----GRRSDMPAIRMLCIIFIEFWRGVPLITVLFMA----------SVMLPLFL 223

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                    +   + ++ +++A++AE+VR GL A+P GQ EAA A+GLT+ +A   V+LP
Sbjct: 224 PEGVNPDNLLRCLVGVALFSSAYMAEVVRGGLQAIPAGQYEAARAVGLTYWQAMGQVVLP 283

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMF 372
           QA+R +IP + + ++ L K+++L + VG  DL+      ++     I        +    
Sbjct: 284 QALRHVIPGIVNTFIGLFKDTTLVLIVGIFDLLGQVRAQLSDPNWTIPQGALTGYIFAAL 343

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ + N +  ++    ++
Sbjct: 344 VFWVFCFGMSQYSNFMERRLDTTRER 369


>gi|83746553|ref|ZP_00943604.1| Glutamine transport system permease protein glnP [Ralstonia
           solanacearum UW551]
 gi|207743863|ref|YP_002260255.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726884|gb|EAP74011.1| Glutamine transport system permease protein glnP [Ralstonia
           solanacearum UW551]
 gi|206595263|emb|CAQ62190.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 230

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 18/201 (8%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GIVL L           +      L + +T L++ +    L+ + +  +F  P +    
Sbjct: 42  VGIVLGLC----------RVSPIGVLRWPATALVYLVRGTPLLMVIFWAYFLLPSITG-- 89

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                  + +F ++  AL  +  A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+
Sbjct: 90  -----QRTDQFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVI 144

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIY 374
           LPQA+R+++P L +Q ++ +K +SL   +   ++  +   I      ++ E   +    Y
Sbjct: 145 LPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFITTQISTAVMTKSAETYGLLALSY 204

Query: 375 LSLSIMIALFMNRLNAKIALK 395
             +   +      L  ++A +
Sbjct: 205 FVMCFGLTRCAYLLERRLAAR 225


>gi|330429987|gb|AEC21321.1| glutamate/aspartate transport system permease protein [Pusillimonas
           sp. T7-7]
          Length = 251

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 8/241 (3%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                      P G+      L     T+ T    ++ +  +G ++ +     +R     
Sbjct: 4   NWNWLVFFDEAPGGVTYLQTLLEGLAWTIGTATLSWLLALSMGTLVGV-----ARTTSMP 58

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIAL 273
             + L  +Y+   L+  +P LV + L Y +  +  P          +     F+   + L
Sbjct: 59  WARRLGTMYVE--LLRNVPLLVQMFLWYFVMPELVPRSLGDAIKQIAPPWGIFIPAVLCL 116

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             YT++ +AE VR+G+ ++P GQ  AA ALGL   +  R VLLP + R I+PPLTS+ LN
Sbjct: 117 GFYTSSRVAEQVRAGIESLPAGQRMAATALGLESAQVYRYVLLPSSFRIILPPLTSELLN 176

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+KN+S+A  +G  +LV    ++   + Q  E   +    YL L++++   M  L  ++A
Sbjct: 177 LIKNTSVAFTIGLFELVGAARSMQEFSFQVFETFALATLFYLILNLVVVRSMLLLERRLA 236

Query: 394 L 394
           +
Sbjct: 237 V 237



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 37/75 (49%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L G   T   A    + A  +GTLVG  R ++      +  +YVE+ RN+P LV
Sbjct: 19  TYLQTLLEGLAWTIGTATLSWLLALSMGTLVGVARTTSMPWARRLGTMYVELLRNVPLLV 78

Query: 144 VIFFLYKSVLSVLPI 158
            +F  Y  +  ++P 
Sbjct: 79  QMFLWYFVMPELVPR 93


>gi|330446639|ref|ZP_08310291.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490830|dbj|GAA04788.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 246

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    +  +A+  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKLSPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQMLLNDSLYNINEWLNN 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EA  A
Sbjct: 92  YFTQSDPSHEWTSYLPDYIEISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAGKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  +P   + +L LLK ++L   +G  D+V  G      T +
Sbjct: 152 YGMSGFLSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKGALAAGTTQK 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                     ++L  + +  L +N    K ++  +
Sbjct: 212 PFTFYFTVAIVFLIFTSISTLALNWAERKYSIPTR 246



 Score = 43.4 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  ++  G   T  +A   ++ A  +G L    +LS  +    I  +Y  V R IP LV+
Sbjct: 7   YGWSLAQGAWITIQVALLSLLLAATLGMLGALAKLSPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + ++    ++              L          A +    F+ 
Sbjct: 67  MMLIFFGGQMLLNDSLYNINEWLNNYFTQSDPSHEWTSYLPDYIEISPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|208434842|ref|YP_002266508.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           G27]
 gi|208432771|gb|ACI27642.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           G27]
          Length = 229

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 33  PLAITSFILGLFIAVMVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVF- 89

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  + VP+ Q +++++L
Sbjct: 90  --YGLPAL--------GVYMDPIPAGIIAFSFNVGAYASETLRASFLFVPKDQWDSSLSL 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 140 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +   R+  
Sbjct: 200 LPIYLEAALIYWLFCLVLEVIQKRVEK 226


>gi|296535456|ref|ZP_06897646.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296264215|gb|EFH10650.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 229

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 13/230 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG-KALPL-LYIST 226
           ++       + T        +       G ++   A  ++      +G + L        
Sbjct: 3   IWSWEGFFGYLTNPYLLEGALLSIGLTAGALVCGLALGIALALLRLSGNRWLAGGAATYC 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +L  G P LV + + Y               G     P   +  + LS   AA+++E VR
Sbjct: 63  WLFRGTPLLVQLLVIY---------TALPLFGLRLSVP--AAALLGLSLNEAAYLSETVR 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP+GQ EAA+ALGL   +A RLV+ PQA+R IIPPL +    LLK +S+A  +  
Sbjct: 112 AGIQAVPKGQREAALALGLRGVQAFRLVIWPQALRIIIPPLGNSVNGLLKTTSVASVISM 171

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +L+     +I +    +E+  +    YL ++    L    L  +     
Sbjct: 172 DELLRRTQILIQERFLVLELFAVAALYYLLMTTAWDLAQRGLERRFGRGH 221


>gi|33595380|ref|NP_883023.1| putative permease component of ABC transporter [Bordetella
           parapertussis 12822]
 gi|33565458|emb|CAE40091.1| putative permease component of ABC transporter [Bordetella
           parapertussis]
          Length = 216

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 18/206 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V    LG+VL+LF     R       + L   Y+S F    L           ++F 
Sbjct: 25  SSAVLGTALGLVLALF-----RLSPVAPLRWLAFWYVSIFRGTPLL-----LQLLLIYFG 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P         G  + P   +  +AL   +AA+++E  RSG++ V RGQ+EAA +LG+  
Sbjct: 75  LPHY-------GIELEP-VPTAILALLLCSAAYLSENFRSGILGVDRGQIEAAQSLGMGA 126

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            ++   ++LPQA+R   P + ++Y+ L+K++SLA  +    L  +   I + T + +E+ 
Sbjct: 127 ARSLFRIILPQAIRIAAPTMGTRYIALMKDTSLASTITVVKLTKMAEQIGSNTFRYMEMF 186

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIA 393
           +I   +Y  ++ M+      + +K+ 
Sbjct: 187 IIAGALYWVINQMLTFIQVWVESKLG 212



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
             +  T +G ++   RLS    + W+   YV +FR  P L+ +  +Y  +      
Sbjct: 26  SAVLGTALGLVLALFRLSPVAPLRWLAFWYVSIFRGTPLLLQLLLIYFGLPHYGIE 81


>gi|324997392|ref|ZP_08118504.1| glutamate permease [Pseudonocardia sp. P1]
          Length = 292

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 18/267 (6%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN    VV      ++++ +    +                     +       V +F++
Sbjct: 16  RNRALGVVGVAAVVAIVAFVLWRFYDAGQFSPRLWEWITYVNIQYILLGALWATVSAFLV 75

Query: 197 GIVLSLFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             VLSL    +    R    +         +  F       + L+ L + L+F       
Sbjct: 76  AAVLSLVFGAVFAGGRLSDHRWVSGPATAIVEFFR-----AIPLLVLIFILYFGLSQ--- 127

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
               G       F ++ + L  Y  + +AE+ R+G+ AVPRGQ EAA ALGL   +    
Sbjct: 128 ----GLGIDIDAFWAVVLGLMLYNGSVLAEVFRAGVNAVPRGQREAAYALGLRKTQVMTN 183

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIW 370
           VLLPQA RS++P + SQ + +LK+++L   + + +L+     + +Q       + + ++ 
Sbjct: 184 VLLPQAFRSMLPTILSQLVVVLKDTALGFIILYPELLYQARFLGSQNQLGAPILPVAIVI 243

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             IY+ L +++      +  ++A   +
Sbjct: 244 AVIYIGLCLILTGLSRLVEKRLARGPR 270



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 68/192 (35%), Gaps = 6/192 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T        + + + G +   GRLS ++ V+      VE FR IP LV+IF L
Sbjct: 62  LLGALWATVSAFLVAAVLSLVFGAVFAGGRLSDHRWVSGPATAIVEFFRAIPLLVLIFIL 121

Query: 149 YKSVLS-VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV---FSFVLGIVLSLFA 204
           Y  +   +    D    +  G+ L N  +         NA        ++ LG+  +   
Sbjct: 122 YFGLSQGLGIDIDAFWAVVLGLMLYNGSVLAEVFRAGVNAVPRGQREAAYALGLRKT--Q 179

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
              +    +     LP +     ++     L  I L  +L +    LG  N +G   +  
Sbjct: 180 VMTNVLLPQAFRSMLPTILSQLVVVLKDTALGFIILYPELLYQARFLGSQNQLGAPILPV 239

Query: 265 EFMSLYIALSCY 276
             +   I +   
Sbjct: 240 AIVIAVIYIGLC 251


>gi|300310495|ref|YP_003774587.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300073280|gb|ADJ62679.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 218

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 18/236 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++L   +      L    +T++     F+ S V+G++L+L           K  +  P+ 
Sbjct: 1   MLLQNVLDFLPILLKGALVTVEVTIYSFLLSSVIGLLLALM----------KVSRLKPVA 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                ++  +  L +I   + ++F  P +              F +  + L    +A+ A
Sbjct: 51  LAGATIVNIIRGLPIIVQLFYIYFVLPDI--------GIQLSAFQAGVVGLGIAYSAYQA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ AV  GQ+EAA ++G+      R V+LPQA R  +PP  +  + +LK+SSL  
Sbjct: 103 ENFRAGIEAVDMGQIEAAQSIGMRGPLIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   ++   G  I + T Q + +      +YL LS+ +   + RL  + +    +
Sbjct: 163 TITVLEMTRAGQMIASSTFQNMTVYTTVAVLYLLLSLPLVFLIRRLEIRNSKGRAR 218


>gi|296103993|ref|YP_003614139.1| histidine/lysine/arginine/ornithine transport system permease
           protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058452|gb|ADF63190.1| histidine/lysine/arginine/ornithine transport system permease
           protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 238

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 97/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++F   + R  + K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLISSVVMGGILAVFL-AIGRVSNNKFIQFP--IWLFTYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++     +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTEML-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 YGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|225570417|ref|ZP_03779442.1| hypothetical protein CLOHYLEM_06517 [Clostridium hylemonae DSM
           15053]
 gi|225160788|gb|EEG73407.1| hypothetical protein CLOHYLEM_06517 [Clostridium hylemonae DSM
           15053]
          Length = 216

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   +FS  LG+++S       R    K  + +  LYIS  ++ G P ++ + + Y  
Sbjct: 20  IFAATLIFSLPLGLIVSF-----GRMSRIKPVQWITKLYIS--IMRGTPLMLQLMVVYYG 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +       + F    + +    ++ I  +   AA+ AEI R G+ ++  GQ EAA  LG
Sbjct: 73  PY-------YLFGMRISATYRMTAVLIGFAINYAAYFAEIYRGGIESISEGQYEAARVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +    ++LPQ M+ I+P +T++ + L+K++SLA  V   ++ +    I      ++
Sbjct: 126 YTRPQTFFRIILPQVMKRILPSVTNEVITLVKDTSLAFVVAVPEMFTTAKQIAAA-QTSM 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +     Y   ++++A+ M  +  K+    
Sbjct: 185 TAFVAAGIFYYVFNLVVAVVMEAIENKLNYYR 216



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 33/67 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               +  G V +  +  + +I +  +G +V  GR+S  K V WI ++Y+ + R  P ++ 
Sbjct: 6   ILKQLAGGMVVSIEIFAATLIFSLPLGLIVSFGRMSRIKPVQWITKLYISIMRGTPLMLQ 65

Query: 145 IFFLYKS 151
           +  +Y  
Sbjct: 66  LMVVYYG 72


>gi|254393591|ref|ZP_05008723.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294812810|ref|ZP_06771453.1| Putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326441240|ref|ZP_08215974.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197707210|gb|EDY53022.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294325409|gb|EFG07052.1| Putative polar amino acid ABC transporter substrate-binding protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 249

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 13/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +    ++ V S  LG  ++L    ++R       +     Y   F   G+  L
Sbjct: 9   WQLLLSGLWVTVQLTVGSAALGGAVALVVG-VARTHRRWIVRFAAGCYFEVF--RGMSAL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L+   + + F  P+   +  +          +  +AL     A+ +E+VR  L AVP G
Sbjct: 66  ILM---FWIFFVLPLGLGWQLV-------PMWAAVLALGLTYGAYGSEVVRGALAAVPAG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA+ALG    + T  VLLPQA   +I PL +  + L+K ++L   +G +DL      
Sbjct: 116 QREAALALGFGPARTTARVLLPQAWPEMIRPLNNLLVELVKGTALVSVMGVSDLAFGAAL 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + N TGQ+  +  + +  Y  L+ ++   M  L  +
Sbjct: 176 VRNATGQSAPVYTVILVAYFLLAFVLTRGMRALERR 211



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L          +  +VG  R     +V +    Y EVFR +  L+++
Sbjct: 9   WQLLLSGLWVTVQLTVGSAALGGAVALVVGVARTHRRWIVRFAAGCYFEVFRGMSALILM 68

Query: 146 FFLYKSVLSVLPIPDHSIV 164
           F+++  +   L      + 
Sbjct: 69  FWIFFVLPLGLGWQLVPMW 87


>gi|300718664|ref|YP_003743467.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064500|emb|CAX61620.1| L-amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 366

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 68/339 (20%), Positives = 134/339 (39%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P+        A+++G ++         I    + ++   G   
Sbjct: 76  WVFIHARFG-QFMYGLYPHELRWRINLALVIGLLS---------ILPMFLKSMPRRG--- 122

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                     +Y+ V+  + P+ V   LY     +  +                     T
Sbjct: 123 ----------LYIAVWAVVYPIAVWVLLYGGFFGLERVETRQ-------------WGGLT 159

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   +     +  LGI+L+L     +R       +AL +++I  +    L T++ ++ 
Sbjct: 160 LTLIIASIGIAGALPLGILLAL-----ARRSSMPVVRALSVIFIEFWRGVPLITVLFMS- 213

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+       + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 214 ---------SVMLPLFMSEGNSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQTEAA 264

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 265 ESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 324

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 325 AWLGMSTEGYVFAALVYWIFCFSMSRYSQYLEKRFHTGR 363


>gi|16264848|ref|NP_437640.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|15140987|emb|CAC49500.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
          Length = 549

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 15/207 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251
           VL I+L L        F     +  PL   S F+   I G+P LV++     L+   P+ 
Sbjct: 354 VLAIILGLL------TFGGYLHRRHPLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402

Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G   +   G    P  M   +A++   +A++AEI RSG+ A+P GQ+EAA ++GL   + 
Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+LPQA R IIPPL ++ + +LK++SL   +   D+        + +          
Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSLLSILSIRDITQRMREFQSASFLPFAPYNSA 522

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
              Y+ L++  A  +N +  K  +K +
Sbjct: 523 AIFYIFLTLAAASLINMIERKYDIKHR 549


>gi|304396808|ref|ZP_07378688.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355604|gb|EFM19971.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 222

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 18/214 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   + S + GI++++   R + HF  K  +    L  +  L+  +  L  +   Y 
Sbjct: 23  QLCAVAALCSLLWGIIMAIGMLR-APHFWRKLLRLYSALTQALPLLVVIYLLYFVLPDYN 81

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +    P                  +  +AL+ Y A ++A+++RS +  +PRGQ EA   L
Sbjct: 82  ITLSSPQ-----------------AGVLALTLYYAPYVAQVIRSAIETLPRGQWEACRVL 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V LPQ +  ++ PL    + L+K+S+L   V   + +      I++T   
Sbjct: 125 GLSRMEQLRDVALPQTLPQMLSPLVGLLIGLIKDSALLSIVSVQEFMYAAKEAISETYAP 184

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +EI L     Y +L+ ++     R+  ++    +
Sbjct: 185 LEIYLTVALSYWALNSLLDGLTRRIEFRMTRYRR 218


>gi|260460788|ref|ZP_05809038.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033365|gb|EEW34626.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 3/211 (1%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
              + V       VL++ A  LS  F      A+ +LY    L + +  L+ + +   L 
Sbjct: 12  YWDLLVTGAWWTAVLTISAGALSFVFG--ILFAITVLYAPAILAYPVRALMWLFMGTPLL 69

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                L  F  +      P   +  + L  + A + A+++R+G++AV  GQ E A ++G 
Sbjct: 70  LQL-FLIYFGLVQVGIDIPALAAGIVGLGLHFAVYNADVIRAGVVAVDIGQTEGARSIGF 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  R V++PQA+R+  PP+ S  + LLK SS+   +G A+LV      I++T +  E
Sbjct: 129 GKWQTLRYVVIPQAIRNTAPPIGSNLIALLKESSVVSVIGIAELVHSAQLAISETFRPFE 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +    +Y  L++++   ++R    + +  
Sbjct: 189 FYITAAALYYILNLVLEAALHRFERHVEVSR 219



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 42/111 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T  + Y   ++ G   T  L  S    + + G L     L A  ++A+  R  + +F
Sbjct: 4   LDFTIVAPYWDLLVTGAWWTAVLTISAGALSFVFGILFAITVLYAPAILAYPVRALMWLF 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              P L+ +F +Y  ++ V            G+ L+    +   +     A
Sbjct: 64  MGTPLLLQLFLIYFGLVQVGIDIPALAAGIVGLGLHFAVYNADVIRAGVVA 114


>gi|186894791|ref|YP_001871903.1| arginine transporter permease subunit ArtM [Yersinia
           pseudotuberculosis PB1/+]
 gi|186697817|gb|ACC88446.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 222

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT  A PL+ I   L  G P LV I L Y      P + ++ ++      P ++   IAL
Sbjct: 40  KTPIATPLVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLWSLLSQP-WLCAMIAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++ R++   +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPSGQWQSCEALGMSKRQSL-RILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K +SLA  +   +++     +  +T   + +      +YL ++ ++ L M  +  K  
Sbjct: 158 VFKGTSLAYTITLMEVMGYSQLMYGRTYDVM-VFGAAGVVYLCVNGLLTLLMRLVERKAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 AFERR 221


>gi|312883095|ref|ZP_07742826.1| ABC transporter: Transmembrane protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369255|gb|EFP96776.1| ABC transporter: Transmembrane protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 297

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 109/272 (40%), Gaps = 16/272 (5%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +   I   V   +   SV        H       +  +N  L +    + +  +I +F  
Sbjct: 20  LIAVIATFVSWLYYRSSVGINYHWRWHEAFDLIFVSSSNGSLPYFFQGLISTIRISIFGI 79

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--- 251
           +L   L +    ++R       +    +++           + I   +      P L   
Sbjct: 80  LLAFTLGIIIG-VARRSSLSFLRIPASIFVHLIRNIPPLVFIFIFYFFVSSQLVPALGLD 138

Query: 252 ------------GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                        Q  F G   +    +S  + +   ++A+IAEI+R+GL  V +GQ EA
Sbjct: 139 SLLRDNTDEVSSWQLIFFGPPNLWENLLSGVLCVGFLSSAYIAEIIRAGLDGVAKGQWEA 198

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGL++    R ++ PQ + S+ P L  Q ++L+K++S+   +   ++  VG  I N 
Sbjct: 199 ADSLGLSNWVKYRYIIAPQVIASVTPTLAGQAISLVKDTSIVSLISIQEMTFVGTEIANS 258

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +G   EI LI    Y  L + +++    L  K
Sbjct: 259 SGLIFEIWLIIGLFYFLLCLSLSVTFKSLEKK 290



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 12/112 (10%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           IIL  ++     W          +S++ +   +    A       ++  +S +       
Sbjct: 18  IILIAVIATFVSWLYY-------RSSVGINYHWRWHEA-----FDLIFVSSSNGSLPYFF 65

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            G ++T  ++  G++ A  +G ++G  R S+   +     ++V + RNIPPL
Sbjct: 66  QGLISTIRISIFGILLAFTLGIIIGVARRSSLSFLRIPASIFVHLIRNIPPL 117


>gi|296159437|ref|ZP_06842262.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295890421|gb|EFG70214.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 229

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +A+   Y  T LI  +P LVL+ L +                       F++
Sbjct: 39  KLSFNRPLRAIATGY--TTLIRSVPDLVLMLLLFYSIQIAVNDLTDALNLPQFDIDPFVA 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + 
Sbjct: 97  GVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIG 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T      ILI   IYL+++ +  L +  L
Sbjct: 157 NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILIAALIYLAITTVSNLVLIWL 216

Query: 389 NAKIALKEKK 398
             + ++  + 
Sbjct: 217 EKRYSIGVRH 226


>gi|284992301|ref|YP_003410855.1| polar amino acid ABC transporter inner membrane subunit
           [Geodermatophilus obscurus DSM 43160]
 gi|284065546|gb|ADB76484.1| polar amino acid ABC transporter, inner membrane subunit
           [Geodermatophilus obscurus DSM 43160]
          Length = 301

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 20/211 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ +   VL  VL L    + R    +  + +    I  F         L+ L + L+F
Sbjct: 73  LQVAIVGMVLATVLGLVL-SVGRLSEHRWVRVVVTTSIEFFRAVP-----LLVLIFALYF 126

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P                F +L   L  Y AA +AEI R+G+++V RGQ EAA  LG+ 
Sbjct: 127 LLPKF--------GIRLSAFWALVGGLVLYNAAVLAEIFRAGILSVDRGQREAAYGLGMR 178

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ------T 360
             +   LVLLPQA+R ++P L +Q + LLK++SL   + F +L+     ++         
Sbjct: 179 KTQVMTLVLLPQAVRRMLPVLIAQLVVLLKDTSLGFIISFPELLRGARGLVEFFTLQFGN 238

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               ++ +    IY++++++++     +  +
Sbjct: 239 QYTFQLYVAAAVIYIAINLVLSWLAQYVERR 269



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 50/110 (45%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+     E  +  V +   S    A+    + T  +A  GM+ AT++G ++  GRLS ++
Sbjct: 40  LAGNGQLEAQRWAVLFDPASQVPQALGQALLRTLQVAIVGMVLATVLGLVLSVGRLSEHR 99

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            V  +    +E FR +P LV+IF LY  +            L  G+ L N
Sbjct: 100 WVRVVVTTSIEFFRAVPLLVLIFALYFLLPKFGIRLSAFWALVGGLVLYN 149


>gi|170691908|ref|ZP_02883072.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143192|gb|EDT11356.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 237

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R    K    L  LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSIPL-AVARVSKRKWLAGLVWLY--TYIFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A +  T A+  EI    + A P G++EAA A G++
Sbjct: 84  SLEVIRNHE-LTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATPYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T Q+   
Sbjct: 143 SFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPDILKIARDVNSATYQSFNA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     R   +
Sbjct: 203 FGIAALLYLCISFALVWLFRRAERR 227



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A +  +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGLAITLWLLVVSIGLGFCLSIPLAVARVSKRKWLAGLVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR  P  V +   Y  + S+  I +H +   F     +  L   TL          
Sbjct: 62  YTYIFRGTPLYVQLLLCYTGLYSLEVIRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|58337932|ref|YP_194517.1| amino acid ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227902900|ref|ZP_04020705.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
 gi|58255249|gb|AAV43486.1| amino acid ABC transporter permease protein [Lactobacillus
           acidophilus NCFM]
 gi|227869316|gb|EEJ76737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus acidophilus ATCC 4796]
          Length = 215

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 15/227 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +   N  L            IF  + +L   L +    L      K  K L   Y+  
Sbjct: 1   MSLTYINEILPALFSGAGMTLSIFFLTIILATPLGILV-SLGEMSKIKPLKWLVNFYV-- 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +++ G P L+ +   +   +  P++          V P + +   A     AA+ AEI R
Sbjct: 58  WIMRGTPLLLQLIFVF---YGLPIIH--------IVFPRYQAALFAFVLNYAAYFAEIFR 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G  ++  GQ EAA  L LT  +    +++PQ ++ ++P + ++ +NL+K+SSL   +G 
Sbjct: 107 GGFQSIDEGQFEAAKVLRLTRFQTMTKIIIPQVIKIVLPSIGNEVINLIKDSSLVYVIGL 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            DL+  G   + +    +  +++   IYL L  + A  M +L    +
Sbjct: 167 GDLLRAGNVAMARD-VTLVPLVLVGIIYLLLISICAFVMKKLEKHFS 212



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 39/104 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+  G   T  + F  +I AT +G LV  G +S  K + W+   YV + R  P L+ 
Sbjct: 9   ILPALFSGAGMTLSIFFLTIILATPLGILVSLGEMSKIKPLKWLVNFYVWIMRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F++  +  +  +        F   LN              + 
Sbjct: 69  LIFVFYGLPIIHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQSI 112


>gi|327474724|gb|EGF20129.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|327490281|gb|EGF22069.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
 gi|328946748|gb|EGG40886.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 226

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 10/176 (5%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  + L  +++        P LV   + +   +  P++  +     + +   + +  + +
Sbjct: 52  KVLRGLARVFVEF--YQNTPLLVQFVIVF---YGLPLVSNY-----TIMPSIYWTAVLCV 101

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y  A+IAE++RSG+ ++PRGQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +N
Sbjct: 102 GLYHGAYIAEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQIVN 161

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           L+KN+S    +   DL+ V  +        I        +Y  L   IA +  R+ 
Sbjct: 162 LIKNTSTVAIISGMDLMFVTKSWSALNSNYIPAFAGAALLYFLLCFPIASWGRRVE 217



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +  A ++G   GA     +K++  + RV+VE ++N P LV    +
Sbjct: 18  FFQGFLFTLAISIGALTLALLLGIFFGAISTGKHKVLRGLARVFVEFYQNTPLLVQFVIV 77

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  V        +  
Sbjct: 78  FYGLPLVSNYTIMPSIYW 95


>gi|229159722|ref|ZP_04287731.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus R309803]
 gi|228623747|gb|EEK80564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus R309803]
          Length = 214

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGIL-------RYMKIPVVSQILGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|67459548|ref|YP_247172.1| amino acid ABC transporter permease [Rickettsia felis URRWXCal2]
 gi|75536048|sp|Q4UKC4|GLNP_RICFE RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|67005081|gb|AAY62007.1| Amino acid ABC transporter permease protein [Rickettsia felis
           URRWXCal2]
          Length = 218

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 104/228 (45%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      + F         K  V + + G+V+ +    + +    +  +     Y 
Sbjct: 1   MFEYLIKFYPKILFIVEGTLVTLKYSVIAVIFGLVIGMLL-AICKVNKNRALRLFANFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ +++ Y   F  P +    F         FM+  I+ S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLSIIY---FASPYIIGVKF-------SVFMAGAISFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EAA+AL +      + ++LPQA+++I P L ++ +NL+K S++   +
Sbjct: 108 IRAGINAVDKGQFEAAVALAIPKFLIMKDIILPQAVKNIFPSLVNELVNLVKESAIISML 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      + I    Y  L ++I+     +  K+
Sbjct: 168 GEMDLMRRAQIVSIETYNYFFPMFIAACCYYILVMLISFIAKIIEKKM 215



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N+ +      Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNRALRLFANFYTSIFRGTPLLIQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|107023048|ref|YP_621375.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686711|ref|YP_839958.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170735480|ref|YP_001774594.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|254250728|ref|ZP_04944047.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
 gi|105893237|gb|ABF76402.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652426|gb|ABK13065.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124879862|gb|EAY67218.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
 gi|169821518|gb|ACA96099.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 216

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 13/183 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +  LYI  F   G P L+ + + +   F  P++            P +++
Sbjct: 42  RVSGSTVLRGIAKLYIEVF--QGTPLLMQLFIVF---FGLPLV--------GLDVPPWVA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
               L+ +T+A++AEI R  + AVP+GQ EA+ +L +++ +  R V+LPQA R  I P  
Sbjct: 89  ATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIAIAPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              +  +K+++L   +GF +L  VG  I N T +   +  +   IY +L   +  +   L
Sbjct: 149 GFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTRYARTL 208

Query: 389 NAK 391
             +
Sbjct: 209 QRR 211



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+    T  L+    +   ++G  +   R+S + ++  I ++Y+EVF+  P L+ +F +
Sbjct: 13  LLLAARWTIVLSIVSFVTGGLVGLGLLVMRVSGSTVLRGIAKLYIEVFQGTPLLMQLFIV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  +  V       +    G+                 A
Sbjct: 73  FFGLPLVGLDVPPWVAATAGLTFFTSAYLAEIWRGCVEA 111


>gi|323492218|ref|ZP_08097376.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
 gi|323313531|gb|EGA66637.1| amino acid ABC transporter, permease protein [Vibrio brasiliensis
           LMG 20546]
          Length = 303

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 99/195 (50%), Gaps = 4/195 (2%)

Query: 201 SLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQL---HFDKPVLGQFNF 256
           S+   R+  +   +  + +P L+++  F  F    L+ +    Q+   H       Q   
Sbjct: 102 SIAILRMPANAFVQLIRNIPPLVFVFIFYFFISNQLIPLLGLDQILRQHSGDINEVQNFL 161

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G +++    +S  + +   ++A++AE+VRSGL +V +GQ EAA +LGL+     R V+ 
Sbjct: 162 FGPASLWENLLSGILCVGLLSSAYVAEVVRSGLSSVAQGQWEAADSLGLSSWAKYRYVIA 221

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ + +I P L  Q ++L+K++S+   +   ++  VG  I N +G   EI LI    Y +
Sbjct: 222 PQVLAAITPALAGQAISLIKDTSIVSLISIQEMTFVGTEIANSSGLIFEIWLIVGLAYFT 281

Query: 377 LSIMIALFMNRLNAK 391
           L + ++L   R+  +
Sbjct: 282 LCMSLSLLFKRIEKR 296



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               G ++T  ++  GM+ A  +GT +G  R S+  ++      +V++ RNIPPL
Sbjct: 69  YFFQGLISTLRISIWGMLLALGLGTALGIARHSSIAILRMPANAFVQLIRNIPPL 123


>gi|294787059|ref|ZP_06752313.1| glutamate transport system permease protein GluD [Parascardovia
           denticolens F0305]
 gi|315226709|ref|ZP_07868497.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Parascardovia denticolens DSM 10105]
 gi|294485892|gb|EFG33526.1| glutamate transport system permease protein GluD [Parascardovia
           denticolens F0305]
 gi|315120841|gb|EFT83973.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Parascardovia denticolens DSM 10105]
          Length = 419

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 102/234 (43%), Gaps = 18/234 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                      +  L     T+       V S + G++  +      R       + L  
Sbjct: 63  WRPALDSEAWTDFYLPGLVQTLAAAGVAIVGSVLFGLLFGI-----GRLIPNGFVRWLSG 117

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +       +  +++   ++    D P             S  + ++ ++L  Y  + +
Sbjct: 118 IVVEFCRAVPVLLMMIFMWRWFASLDVP-------------SASYWAVTLSLVLYNGSVV 164

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+VRSG+ ++P GQ EAA+ALGLT  ++  LV +PQA+ +++P   +Q + +LK+++L 
Sbjct: 165 AELVRSGVGSLPGGQHEAALALGLTRTRSLMLVEVPQAIYAMLPAAVTQLVVVLKDTALG 224

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + + DL+     + +     ++ + +   +Y  +  +++     L A++A +
Sbjct: 225 SIILYTDLLQQSRRLGSMYFNILQTLFMAGILYFIMCFIVSRIAETLPARMAAR 278



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 81/220 (36%), Gaps = 17/220 (7%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G V T   A   ++ + + G L G GRL  N  V W+  + V
Sbjct: 61  ELWRPALDSEAWTDFYLPGLVQTLAAAGVAIVGSVLFGLLFGIGRLIPNGFVRWLSGIVV 120

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E  R +P L+++ F+++   S+         +   + L N  +    +         V S
Sbjct: 121 EFCRAVPVLLMMIFMWRWFASLDVPSASYWAVTLSLVLYNGSVVAELVRSG------VGS 174

Query: 194 FVLG---IVLSLFATRLSRHFHEKTGKA----LPLLYISTFLIFGLPTLVLIALKYQLHF 246
              G     L+L  TR       +  +A    LP       ++     L  I L   L  
Sbjct: 175 LPGGQHEAALALGLTRTRSLMLVEVPQAIYAMLPAAVTQLVVVLKDTALGSIILYTDLLQ 234

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIV 285
               LG   F   + +   FM+  +  + C+  + IAE +
Sbjct: 235 QSRRLGSMYF---NILQTLFMAGILYFIMCFIVSRIAETL 271


>gi|161521539|ref|YP_001584966.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189352291|ref|YP_001947918.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221197221|ref|ZP_03570268.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2M]
 gi|221203893|ref|ZP_03576911.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221210914|ref|ZP_03583894.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD1]
 gi|160345589|gb|ABX18674.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189336313|dbj|BAG45382.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221169870|gb|EEE02337.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD1]
 gi|221176059|gb|EEE08488.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221183775|gb|EEE16175.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2M]
          Length = 229

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +A+   Y  T LI  +P LVL+ L +                       F +
Sbjct: 39  KLSTNRVLRAVGTFY--TTLIRAVPDLVLMLLLFYGIQILLNNVTDLLGWQQIDIDPFFA 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   +AVPRGQ+EA  A G+   +  R +L PQ MR  +P + 
Sbjct: 97  GVVTLGFIYGAYFTETFRGAFLAVPRGQLEAGFAYGMGGWRVFRRILFPQMMRFALPGIG 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T       L    IYL+++ +  + ++ L
Sbjct: 157 NNWQVLVKATALVSIIGLADVVKASQDAGKSTLDFFFFTLAAGAIYLAITTVSNVVLHHL 216

Query: 389 NAKIALKEKK 398
             + ++  ++
Sbjct: 217 EKRYSVGVRR 226


>gi|163848773|ref|YP_001636817.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus aurantiacus J-10-fl]
 gi|222526723|ref|YP_002571194.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus sp. Y-400-fl]
 gi|163670062|gb|ABY36428.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus aurantiacus J-10-fl]
 gi|222450602|gb|ACM54868.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus sp. Y-400-fl]
          Length = 410

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 22/261 (8%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +    +   +LS   +            +  +      LT+       V SF LG++L+L
Sbjct: 164 LRWPLIIAWLLSYPAVILILRGGLGLPIVETKLWGGLLLTLLLAISGIVLSFPLGVLLAL 223

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R       +   +LYI       L T++ +            L    FI G   
Sbjct: 224 -----GRRSSLPVIRVFCVLYIELIRGVPLVTVLFMG----------ALLLPLFIPGGES 268

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               +   +A++ ++AA++AE VR GL ++P+GQ+EAA ALGL   + T L+ LPQA+R+
Sbjct: 269 IDALVRAIVAVTLFSAAYLAENVRGGLQSIPKGQIEAARALGLNVFQTTLLITLPQALRA 328

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-------GQAIEIILIWMFIYL 375
           ++P L  Q++ L K++SL V +G  DL+     I+ Q        G   E  L+   IY 
Sbjct: 329 VVPVLVGQFIALFKDTSLVVIIGLVDLLGAAQNIVGQPQWLGTPGGVWRETFLVIAAIYW 388

Query: 376 SLSIMIALFMNRLNAKIALKE 396
             S  ++    R+  +IA   
Sbjct: 389 VFSFTMSRISKRIEDQIARSR 409


>gi|325525014|gb|EGD02926.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 246

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFIWYLVVPELLPASIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFIWYLVVPELLPASIGTWI 101


>gi|315644842|ref|ZP_07897971.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315279784|gb|EFU43085.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 216

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 19/220 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+       +FSF++G VL                +   L   + F +  +
Sbjct: 13  RYLLQGFWITVQVAGLSIIFSFIIGTVLGTVRY----------TRTPFLSRTTAFFVDII 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + + +    P              P F +  + LS +  A IAEIVRSGL++V
Sbjct: 63  RNLPLLLIIFFIGMVLPQT--------GIRIPTFWAAVVGLSIFEGAMIAEIVRSGLVSV 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ+EAA A GL++ +  R V+LP A+R + PP+ SQ+++L+K++SLAV +   +L+  
Sbjct: 115 DKGQIEAARASGLSYMQTLRHVILPLALRRMSPPMVSQFISLIKDTSLAVIISLPELMRN 174

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +   +    I  ++    +Y +L+ ++++   +L A+
Sbjct: 175 VQILSGSSYSYVIPALVFASLLYFTLNYLLSIIAKQLEAR 214



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 39/88 (44%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L GF  T  +A   +I + IIGT++G  R +    ++     +V++ RN+P 
Sbjct: 8   SWPNLRYLLQGFWITVQVAGLSIIFSFIIGTVLGTVRYTRTPFLSRTTAFFVDIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L++IFF+   +               G+
Sbjct: 68  LLIIFFIGMVLPQTGIRIPTFWAAVVGL 95


>gi|308186224|ref|YP_003930355.1| Arginine transport system permease protein artQ [Pantoea vagans
           C9-1]
 gi|308056734|gb|ADO08906.1| Arginine transport system permease protein artQ [Pantoea vagans
           C9-1]
          Length = 238

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 12/236 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT----------RLSRHFHEKTGKALPLL 222
              +            + V + + G+VL++                        + LP +
Sbjct: 1   MNEMMTLASAAGMTVGLAVCALIAGLVLAMIFAGWESLRLRPLAWIGTGLVTLIRGLPEI 60

Query: 223 YISTFLIFGLPTLVL-IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +  F+ FG   L+L ++  + L+F    L     I    VSP F+   IAL+   AA+ 
Sbjct: 61  LVVLFIYFGASQLLLTLSDGFTLNFGLFTLPVQIQIENFDVSP-FLCGVIALAMLYAAYA 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L +Q+L LLK+++L 
Sbjct: 120 SQTLRGALKAVPVGQWESGQALGMKKSAIFLRLIMPQMWRHALPGLGNQWLVLLKDTALV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   DL+    +I  +T +     L+   IYL +++     + R+  +    E+
Sbjct: 180 SLISVNDLMLQTKSIATRTQEPFTWFLVAAAIYLVITLFSQAVLRRIELRTTRFER 235


>gi|307730961|ref|YP_003908185.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307585496|gb|ADN58894.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 246

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                   ++ P         L +          + + ++V+ +++  F   L R    K
Sbjct: 2   SYHWNWGILLSPVSTGEPTTYLGWLLSGFWVTITVSLSAWVIALIVGSFFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
               +  +Y++ F    +P +V     Y  +    PV     F      +  F +  I L
Sbjct: 61  WASGVGTVYVAIF--RNIPLIVQFFTWYLVIPELLPVSIGTWFKQLPPGAQFFSASIICL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M  + AK  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTSQTYESFIAVTLAYVLINLVVMQLMRWVEAKTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 45/94 (47%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L GF  T  ++ S  + A I+G+  G  R   NK  + + 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGFWVTITVSLSAWVIALIVGSFFGVLRTVPNKWASGVG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            VYV +FRNIP +V  F  Y  +  +LP+   + 
Sbjct: 67  TVYVAIFRNIPLIVQFFTWYLVIPELLPVSIGTW 100


>gi|94676741|ref|YP_588663.1| amino acid ABC transporter, permease protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219891|gb|ABF14050.1| amino acid ABC transporter, permease protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 218

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 105/226 (46%), Gaps = 14/226 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           + P+   +++         +     + + SF +G++L L  T L R +  +  + +   Y
Sbjct: 1   MPPWLQLIHDSFWRLFIAGLYFTLPLALLSFFIGLILGLLVT-LIRLYSSRYLQLIANFY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  ++I G P LV + L +                       F +  I  +    A+ +E
Sbjct: 60  V--WVIRGTPLLVQLFLIFY-----------GLPSAGITLDAFPAALIGFTLNIGAYSSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R  +++VP  Q EAA A+G+   +A   V+LPQA+   +PPL + +++L+K++SLA  
Sbjct: 107 IIRGAILSVPLTQWEAAWAIGMNSTQAMIRVILPQAIFVALPPLANSFISLIKDTSLAAV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +   ++      I++ T + + + +    IYL  S ++  +  +L 
Sbjct: 167 ITVPEIFLAAQRIVSVTYEPLILYIEAAAIYLLYSTVLGKWQTKLE 212



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 36/90 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S+    + G   T  LA        I+G LV   RL +++ +  I   YV V R  P L
Sbjct: 10  DSFWRLFIAGLYFTLPLALLSFFIGLILGLLVTLIRLYSSRYLQLIANFYVWVIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +F ++  + S     D       G  LN
Sbjct: 70  VQLFLIFYGLPSAGITLDAFPAALIGFTLN 99


>gi|90579333|ref|ZP_01235143.1| putative ABC-type arginine transport system, permease component
           [Vibrio angustum S14]
 gi|90440166|gb|EAS65347.1| putative ABC-type arginine transport system, permease component
           [Vibrio angustum S14]
          Length = 246

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 90/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    +  +A+  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKLSPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQMLLNDSLYNINEWLNN 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EA  A
Sbjct: 92  YFTQSDPNHEWTSYLPDYIEISPFVAGILTIGFIFGAYMAETFRGAILAVDKGELEAGKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  +P   + +L LLK ++L   +G  D+V  G      T +
Sbjct: 152 YGMSAFLSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKGALAAGTTQK 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                     ++L  + +  L +N    K ++  +
Sbjct: 212 PFTFYFTVAIVFLIFTSISTLALNWAERKYSIPTR 246



 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  ++  G + T  +A   ++ A  +G L    +LS  +    I  +Y  V R IP LV+
Sbjct: 7   YGWSLAQGAMITIQVALLSLLLAATLGMLGALAKLSPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + ++    ++              L          A I    F+ 
Sbjct: 67  MMLIFFGGQMLLNDSLYNINEWLNNYFTQSDPNHEWTSYLPDYIEISPFVAGILTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|46578805|ref|YP_009613.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Desulfovibrio vulgaris str. Hildenborough]
 gi|120603588|ref|YP_967988.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris DP4]
 gi|46448217|gb|AAS94872.1| amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563817|gb|ABM29561.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232668|gb|ADP85522.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 224

 Score =  129 bits (324), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +    F+    L      + T+  + V S  LG++  +      R F     +    +Y 
Sbjct: 1   MFDPDFVFGEMLPALNRGLITSMMLIVPSATLGLLFGIIVGT-GRVFGPAWVRKAGDIYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +TF   G+P +V + + Y           F           F +  +     +AA+ +E 
Sbjct: 60  ATF--RGVPLVVQLMIIY-----------FGLPNIGIYLEPFPAAVLGFVLCSAAYNSEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++ +GQ++AA ALG +  K    +++PQA+R  +P   ++ + L+K SSLA  +
Sbjct: 107 VRGALLSIRQGQLKAAQALGFSKLKTVLFIVVPQAVRRALPGCGNEIIYLIKYSSLAYVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +L   G  +  ++ +  E+ L     YL L  + +  ++R+    ++
Sbjct: 167 TCIELTGEGKVVAARSFRFTEVFLFVGAYYLFLVTLASWILHRVEQHFSI 216



 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 34/93 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G + +  L         + G +VG GR+     V     +Y   FR +P +V +  
Sbjct: 14  ALNRGLITSMMLIVPSATLGLLFGIIVGTGRVFGPAWVRKAGDIYTATFRGVPLVVQLMI 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           +Y  + ++    +       G  L +   +   
Sbjct: 74  IYFGLPNIGIYLEPFPAAVLGFVLCSAAYNSEY 106


>gi|258622431|ref|ZP_05717453.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|258623750|ref|ZP_05718709.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258583968|gb|EEW08758.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258585131|gb|EEW09858.1| amino acid ABC transporter, permease protein [Vibrio mimicus VM573]
          Length = 298

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYIST 226
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L    
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 227 FLIFGL--PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              F +    + L+ L   L +    +        G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGI-------VPYTSD-SSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           + +T          L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYHWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI---------- 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  + + L            
Sbjct: 85  VLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRY 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +            L    L+      +   +++  IV +  A      +       
Sbjct: 145 HTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|170740013|ref|YP_001768668.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168194287|gb|ACA16234.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 216

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 13/189 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +  +AL   YI  F   G P L+ + L + +            I G ++ P + +
Sbjct: 41  RTGEIRALRALAFAYIKLF--QGTPLLMQLFLAFFVP----------GIFGLSIDP-WGA 87

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + LS + +AF+ EI R  +  VPRGQ +AA ALGL +   T LV++PQA+R  + P  
Sbjct: 88  AALGLSLHASAFLGEIWRGAIETVPRGQWQAATALGLGYWNRTALVIVPQAVRIAVAPTI 147

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + L+K +SLA  +GF ++      I N T +   +  +   +Y  +   ++ +  R+
Sbjct: 148 GFLVQLIKATSLASIIGFVEITRAAQVINNATFRPFTLFGLVALVYFVICWPLSAYSRRI 207

Query: 389 NAKIALKEK 397
             K+A+  +
Sbjct: 208 ERKLAVASR 216


>gi|86147173|ref|ZP_01065489.1| amino acid ABC transproter, permease protein [Vibrio sp. MED222]
 gi|218708096|ref|YP_002415717.1| putative amino-acid ABC transporter permease PatM [Vibrio
           splendidus LGP32]
 gi|85835057|gb|EAQ53199.1| amino acid ABC transproter, permease protein [Vibrio sp. MED222]
 gi|218321115|emb|CAV17065.1| Probable amino-acid ABC transporter permease protein patM [Vibrio
           splendidus LGP32]
          Length = 223

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 17/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + L    L +   TM+       F+ +L ++L+       R F       L  L
Sbjct: 3   FDFNYMLELLPILLKYLGTTMEMATWGLFFALILSLILANI-----RVFKIPVLDQLSQL 57

Query: 223 YISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YIS F   G P LV + L Y  L    P +   +          F +  I L+ + AA++
Sbjct: 58  YISFF--RGTPLLVQLFLLYYGLPQVFPWMVGLD---------AFSAAVIGLTLHFAAYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA
Sbjct: 107 AESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A++++      + + +  E  L    IY  + +++         K+
Sbjct: 167 FTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRIQIWAEVKL 217



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G+  A I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMATWGLFFALILSLILANIRVFKIPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  V P  
Sbjct: 75  YYGLPQVFPWM 85


>gi|307133278|ref|YP_003885294.1| ABC transporter permease [Dickeya dadantii 3937]
 gi|306530807|gb|ADN00738.1| ABC transport system, permease component [Dickeya dadantii 3937]
          Length = 252

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 108/229 (47%), Gaps = 11/229 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F      +FP   +   A     S + GI  ++  T L        G A  LL +     
Sbjct: 10  FSYLMWGTFPDGPLGGAALTLALSLMAGIASAVLGTGLGVALAMYRGWAGGLLAMVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P+L   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPMLFGVDI-------PEITTVVCALAFIASAYLAHGVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+ RGQ +A ++LGL   +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGRGQWQAGMSLGLGRWQTLWYIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +   + N++     E+ L    +Y    +++ L +  ++ +     K
Sbjct: 180 TFLATQVNNRSMVYPTEVFLFVALVYFIFCLLLDLLVQGVSRRFRAGPK 228


>gi|239982050|ref|ZP_04704574.1| amino acid ABC transporter transmembrane protein [Streptomyces
           albus J1074]
 gi|291453902|ref|ZP_06593292.1| amino acid ABC transporter permease [Streptomyces albus J1074]
 gi|291356851|gb|EFE83753.1| amino acid ABC transporter permease [Streptomyces albus J1074]
          Length = 245

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 13/217 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             ++    +    ++  +S  L  V++ F   ++R    K  + L   Y   F   G   
Sbjct: 6   WENWVLPGIWVTVQLTFYSAALATVVA-FGVGMARTHRSKFVRFLAGFYTEIF--RGTSA 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVL+   + L F  P L  + F+          +  +AL     A+ AE+VR  L +V  
Sbjct: 63  LVLM---FWLFFVVPPLFGWQFV-------PMYAAVLALGLSYGAYGAEVVRGALNSVTP 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EA +AL  T  +  RL+LLPQA+  +IPP  +  + LLK +++   +G  D+     
Sbjct: 113 AQREAGVALSFTPWQRMRLILLPQAVPEMIPPFNNLLIELLKGTAIVSLLGVGDVSFAAY 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   T ++ +I  I + IY  ++ ++   M  L AK
Sbjct: 173 LVRLATQESAQIYTISLLIYFVIAFVLTRGMRALEAK 209



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 35/80 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L F     AT++   VG  R   +K V ++   Y E+FR    LV+
Sbjct: 6   WENWVLPGIWVTVQLTFYSAALATVVAFGVGMARTHRSKFVRFLAGFYTEIFRGTSALVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +F+L+  V  +       + 
Sbjct: 66  MFWLFFVVPPLFGWQFVPMY 85


>gi|153844579|ref|ZP_01993675.1| membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|149745208|gb|EDM56459.1| membrane protein [Vibrio parahaemolyticus AQ3810]
          Length = 241

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 23/228 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ V S +L ++L      L++    K  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  VTIEVAVLSLLLAVILG-MLGALAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV +G++EAA A G++   + R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDKGELEAAKAYGMSPVLSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  D+V +       T       +    I+L  + +    +  +  K 
Sbjct: 194 GLEDMVRMSSLAAGTTKMPFTFYMAVALIFLFFTSISTGLLKLVERKF 241



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A I+G L    +L+  K    I  +Y  + R IP LV+
Sbjct: 7   YEASIFKGALVTIEVAVLSLLLAVILGMLGALAKLAPYKWARAIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|332111084|gb|EGJ11116.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 250

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 17/232 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLF--------ATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +T+           +LG++  L          T        +  + + L Y++ F   G 
Sbjct: 21  MTIKLTLVAIGAGLILGVLFGLVSSSADAPQPTSRPLALLLRAARGITLAYVTFF--RGT 78

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGS-------TVSPEFMSLYIALSCYTAAFIAEIV 285
           P  V I L +       V      +               F+S  +ALS    A+I+EI 
Sbjct: 79  PLFVQILLVHFALMPALVHPDHGLLISGETARMFRQEHGAFLSGCVALSLNAGAYISEIF 138

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G++++ RGQ +AA ++GLTH +A R V+LPQA R ++P L ++ + L+K+SSL  A+G
Sbjct: 139 RAGILSIHRGQTQAAYSVGLTHAQAMRYVVLPQAFRRMVPALVNEGVTLIKDSSLVSAIG 198

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            A+L     T+     +  E  L    +YL L++ ++L   RL A   L+ +
Sbjct: 199 LAELALAARTVAGAYSRYWEPYLAISAMYLVLTLTLSLLAKRLEAPAHLRGR 250



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 13/124 (10%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-------------NKLVAWICRV 131
           Y      G + T  L    +    I+G L G    SA              +    I   
Sbjct: 11  YGPLFASGLLMTIKLTLVAIGAGLILGVLFGLVSSSADAPQPTSRPLALLLRAARGITLA 70

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           YV  FR  P  V I  ++ +++  L  PDH +++        R      L+      +  
Sbjct: 71  YVTFFRGTPLFVQILLVHFALMPALVHPDHGLLISGETARMFRQEHGAFLSGCVALSLNA 130

Query: 192 FSFV 195
            +++
Sbjct: 131 GAYI 134


>gi|260772506|ref|ZP_05881422.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           metschnikovii CIP 69.14]
 gi|260611645|gb|EEX36848.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           metschnikovii CIP 69.14]
          Length = 246

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 99/234 (42%), Gaps = 23/234 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ ++S +L ++L      L++    +  +++  LY  T ++ G+P LVL+ L + 
Sbjct: 16  WLTIQVALWSLLLAMILG-MLGALAKLAPYRFARSIATLY--TTVVRGIPDLVLMMLIFF 72

Query: 244 LHFDK--------------------PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                                    P     +++        F++  + +     A++AE
Sbjct: 73  GGQILLNNSLFAINEWLNSLLLSRNPDHRWVSYLPDYINVSPFIAGVLTIGFIFGAYMAE 132

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R  ++AV +GQ+EAA A G++     R +LLPQ +R  +P   + +L LLK ++L   
Sbjct: 133 TFRGAMMAVDKGQLEAAKAYGMSGLLTFRRILLPQMIRHALPGFGNNWLVLLKTTALVSI 192

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G  D+V V       T       L    I+L  + +    +  +  K  ++ +
Sbjct: 193 IGLEDMVRVSSLAAGSTQMPFTFYLSVALIFLFFTSVSTGLLKWVERKFTIQTR 246



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y TAIL G   T  +A   ++ A I+G L    +L+  +    I  +Y  V R IP LV+
Sbjct: 7   YETAILQGAWLTIQVALWSLLLAMILGMLGALAKLAPYRFARSIATLYTTVVRGIPDLVL 66

Query: 145 I---FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-LGIVL 200
           +   FF  + +L+      +  +    +  N        L    N   F+   + +G + 
Sbjct: 67  MMLIFFGGQILLNNSLFAINEWLNSLLLSRNPDHRWVSYLPDYINVSPFIAGVLTIGFIF 126

Query: 201 S 201
            
Sbjct: 127 G 127


>gi|325275054|ref|ZP_08141042.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324099817|gb|EGB97675.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 365

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 18/231 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++        LT+       V +  LGI+L+L      R       K + + +I  +   
Sbjct: 150 VSTSQWGGLMLTLVIATVGIVGALPLGILLAL-----GRRSRMPAVKVVCVTFIEFWRGV 204

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L T VL      L    P    F+         + +   I +  + +A++AE+VR GL 
Sbjct: 205 PLIT-VLFMSSVMLPLFLPEGMSFD---------KLLRAMIGVILFQSAYVAEVVRGGLQ 254

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EAA A+GL + +A  LV+LPQA++ +IP + + ++ L K++SL + +G  DL+
Sbjct: 255 AIPKGQYEAAAAMGLGYWRAMGLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDLL 314

Query: 351 SVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +            G A E  +    ++      ++ +   L  K+    K+
Sbjct: 315 NSVKQAAADPAWLGMATEGYVFAALVFWIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSRMPAVKVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPI 158
           +   LP 
Sbjct: 217 LPLFLPE 223


>gi|295426472|ref|ZP_06819122.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
 gi|295063840|gb|EFG54798.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus amylolyticus DSM 11664]
          Length = 219

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 113/235 (48%), Gaps = 19/235 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +     +  L    +T+  +    + SFVLG++  L      ++     G    
Sbjct: 2   ETFIHAYSWVDIHFLLQGLWVTIYVSLISIILSFVLGLIFGLLRYMKIKYVSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+ +  +  IAL  +  A 
Sbjct: 58  ------FVIDIIRNLPLLLIIFFTYFGLPEL--------GIVTNQTAASIIALVIFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ ++  GQME A + G+T  +A   V++PQA+ ++IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGISSIDPGQMEGARSNGMTFGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +   +L+     I +Q T   I + +I   +Y  +   +++F + L  +  +
Sbjct: 164 ATIIVLPELLYHAQIIYSQNTTYIIPMYVIIAVMYFIVCFCLSMFASYLQKRFKM 218



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 38/73 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +++   +I + ++G + G  R    K V+ I    +++ RN+P L++IFF 
Sbjct: 16  LLQGLWVTIYVSLISIILSFVLGLIFGLLRYMKIKYVSAIVGFVIDIIRNLPLLLIIFFT 75

Query: 149 YKSVLSVLPIPDH 161
           Y  +  +  + + 
Sbjct: 76  YFGLPELGIVTNQ 88


>gi|241114115|ref|YP_002973590.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240868688|gb|ACS66346.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 229

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 6/229 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      R   +    + T   +   S   GI L      + R F  +     P+ 
Sbjct: 1   MSYQFDWSSIPRAWPYLVEGLATTGGLVAASITAGIALGTVL-AIGRLFGPR-----PVT 54

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                 +    ++ LI   +   F  P + +              +   A     +A+  
Sbjct: 55  MTVAAYVNVFRSIPLILTIFWFFFLVPAMLRAVTGDPYLTVGPIWAALAAFILAESAYYC 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ +V  GQ+ AA ALGLT  +A R V+LPQA R++ P L +Q + LLK++SL  
Sbjct: 115 EIIRAGIGSVKTGQLSAAKALGLTQWQALRHVILPQAFRNMTPSLINQTIALLKDTSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   D +   G I  + G+ +E+ L    +YL L       +  +  K
Sbjct: 175 VISLTDFLGAAGKIGQRDGRLVEMYLFSAAVYLVLCSFGVWLVAAVQKK 223



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 22/149 (14%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            ++ D   +P          ++ G   T  L  + +     +GT++  GRL   + V   
Sbjct: 2   SYQFDWSSIP-----RAWPYLVEGLATTGGLVAASITAGIALGTVLAIGRLFGPRPVTMT 56

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
              YV VFR+IP ++ IF+ +  V ++L        L  G                    
Sbjct: 57  VAAYVNVFRSIPLILTIFWFFFLVPAMLRAVTGDPYLTVG-----------------PIW 99

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
             + +F+L           +     KTG+
Sbjct: 100 AALAAFILAESAYYCEIIRAGIGSVKTGQ 128


>gi|307243525|ref|ZP_07525673.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
 gi|306493081|gb|EFM65086.1| ABC transporter, permease protein [Peptostreptococcus stomatis DSM
           17678]
          Length = 205

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 17/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 +FS  LGIV++       R  + K   ++   YI  +++ G P L+ +   Y +
Sbjct: 11  LFFVTTIFSIPLGIVVAFV-----RLSNNKIASSVSSFYI--WIMRGSPLLLQMMFFYYV 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       I    V  +    +IA     AA+ AEI R GL+++ +GQ EAA  LG
Sbjct: 64  ---------LPIISPKLVFDQLTVAFIAFVINYAAYYAEIFRGGLLSIDKGQFEAAKVLG 114

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
                  + ++LPQ  + ++PP++++ + L+K++SL   +G  DL+ V     N+    +
Sbjct: 115 FDKITMYKRIILPQLTKRVLPPVSNELITLVKDTSLVYILGLNDLLRVATAASNREASLM 174

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                   IYL ++ ++   M  L  + +   
Sbjct: 175 P-FAYAAVIYLVMTAILTKLMALLEKRYSYYR 205



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G      L F   I +  +G +V   RLS NK+ + +   Y+ + R  P L+ + F 
Sbjct: 1   MFEGVKILLELFFVTTIFSIPLGIVVAFVRLSNNKIASSVSSFYIWIMRGSPLLLQMMFF 60

Query: 149 YKSVLSVLPI 158
           Y  +  + P 
Sbjct: 61  YYVLPIISPK 70


>gi|326204707|ref|ZP_08194562.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
 gi|325985078|gb|EGD45919.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
          Length = 210

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 103/221 (46%), Gaps = 18/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +++   A   +FS  LG+++S       R       + +  +YIS  ++ G P +
Sbjct: 8   LDGMVVSLQIFALTLIFSIPLGLIISF-----GRRTKNIFIRWITSIYIS--IMRGTPLI 60

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + + Y           F+   G      F +  IA     AA+ AEI R G+ ++P+G
Sbjct: 61  LQLLVVYFAPS-----YLFDAKVG-----RFTAAVIAFVLNYAAYFAEIFRGGIESIPKG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA   LG T  +    ++LPQ ++ ++PP++++ + L+K+++L  A+   ++  V   
Sbjct: 111 QYEAGEVLGFTKLQVFFKIVLPQVIKRVLPPISNEVITLVKDTALVSAIAVEEMFRVAQN 170

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++   +++ + +    Y  +++++A   +    K+    
Sbjct: 171 ASSRV-SSVQPLFVAGVFYFIMNLIVAQAFSFAEKKLNYYR 210



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 32/63 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V +  +    +I +  +G ++  GR + N  + WI  +Y+ + R  P ++ +  +
Sbjct: 7   LLDGMVVSLQIFALTLIFSIPLGLIISFGRRTKNIFIRWITSIYISIMRGTPLILQLLVV 66

Query: 149 YKS 151
           Y +
Sbjct: 67  YFA 69


>gi|307319923|ref|ZP_07599346.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306894463|gb|EFN25226.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 549

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 15/207 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251
           VL I+L L        F     +  PL   S F+   I G+P LV++     L+   P+ 
Sbjct: 354 VLAIILGLL------TFGGYLHRRHPLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402

Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G   +   G    P  M   +A++   +A++AEI RSG+ A+P GQ+EAA ++GL   + 
Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+LPQA R IIPPL ++ + +LK++SL   +   D+        + +          
Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSLLSILSIRDITQRMREFQSASFLPFAPYNSA 522

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
              Y+ L++  A  +N +  K  +K +
Sbjct: 523 AIFYIFLTLAAASLINMIERKYDIKHR 549


>gi|262173296|ref|ZP_06040973.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
 gi|261890654|gb|EEY36641.1| amino acid ABC transporter permease protein [Vibrio mimicus MB-451]
          Length = 298

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYIST 226
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L    
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 227 FLIFGL--PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              F +    + L+ L   L +    +        G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGI-------VPYTSD-SSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           + +T          L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYHWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI---------- 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  + + L            
Sbjct: 85  VLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRY 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +            L    L+      +   +++  IV +  A      +       
Sbjct: 145 HTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|149377566|ref|ZP_01895306.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
 gi|149358179|gb|EDM46661.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter algicola DG893]
          Length = 224

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 102/211 (48%), Gaps = 11/211 (5%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
            +    ++     VL ++L+     + R         L +++IS F   G P LV + L 
Sbjct: 19  YLPLTLQLAGVGMVLALILACL-FAVVRVLRIPVLNQLTIVFISFF--RGTPLLVQLFLF 75

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y   +  P L     +   TV     +  + L+ + +A++AE +R+ ++ V R Q EAA+
Sbjct: 76  Y---YGLPQL-----VSALTVIDGITATIMGLTMHFSAYMAESIRAAIVGVDRSQTEAAL 127

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ++G+T+ +  R ++LPQA R  +P L + +++++K +SLA  +G  +L+         + 
Sbjct: 128 SIGMTNGQLMRRIVLPQATRVALPTLMNYFIDMIKATSLAFTLGVTELMGATQKEAAGSF 187

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              E  ++   +Y  +  M++   + L  ++
Sbjct: 188 LYFEAFIVAAIMYWIVVEMLSKLQHYLEIRL 218



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L     T  LA  GM+ A I+  L    R+    ++  +  V++  FR  P LV +F 
Sbjct: 15  VLLGYLPLTLQLAGVGMVLALILACLFAVVRVLRIPVLNQLTIVFISFFRGTPLLVQLFL 74

Query: 148 LYKSVLSV 155
            Y  +  +
Sbjct: 75  FYYGLPQL 82


>gi|238765552|ref|ZP_04626465.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia kristensenii ATCC 33638]
 gi|238696230|gb|EEP89034.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia kristensenii ATCC 33638]
          Length = 245

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 8/228 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLS------LFATRLSRHFHEKTGKALPLLYISTF 227
                  LT+  +A   V S +LG +L+      L   +     +    +  PLL    F
Sbjct: 18  WLWHGFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYSTLFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             F     +  +    L  + P       +     S EF++ +I L+ Y+ AFIAE +RS
Sbjct: 78  WYFAASQFLPASWIPWL--NTPHEITVFGLTLGWPSFEFLAGFIGLTFYSTAFIAEELRS 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A
Sbjct: 136 GISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      +  +T +  +   +   +Y+++  +I  +      + A+K
Sbjct: 196 ELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQRTAVK 243



 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 41/89 (46%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ +T++G L+ A R S  K + W    Y  
Sbjct: 5   HLTDWLLAPQYLGWLWHGFLLTLWISACTVVASTLLGFLLAAARDSELKGLQWFAIGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +    LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQFLPASWIPW 93


>gi|154245546|ref|YP_001416504.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154159631|gb|ABS66847.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 214

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 14/221 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +++          + V  FV G +L L    L+R    +  + L  L +   L+ G+P 
Sbjct: 8   QIAYLFRGAGWTIVLSVLGFVGGTLLGL-PVALARASKSRLLRFLSGLLVQ--LVQGIPL 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            V++ + Y           F         P  ++  +A++ Y+ A++ EI +  ++AVPR
Sbjct: 65  PVIMFVVY-----------FGISIAGFDVPALVAAGVAMTLYSGAYLGEIWKGCILAVPR 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EA   L LT  +    V+LPQA+R  +PP     + ++KN+S +V + F DL     
Sbjct: 114 TQWEAGECLALTKTQRFVFVILPQALRIAVPPTVGFLVQIVKNTSYSVVINFFDLTYSAK 173

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            I N T +   +  I   IY ++   ++L  +R + ++   
Sbjct: 174 VINNATYKPFTVFTIAALIYFAICFPMSLLASRFDRRLHRS 214



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G   T  L+  G +  T++G  V   R S ++L+ ++  + V++ + IP  V++F 
Sbjct: 11  YLFRGAGWTIVLSVLGFVGGTLLGLPVALARASKSRLLRFLSGLLVQLVQGIPLPVIMFV 70

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +Y  +          +     M L +             A
Sbjct: 71  VYFGISIAGFDVPALVAAGVAMTLYSGAYLGEIWKGCILA 110


>gi|326333414|ref|ZP_08199660.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
 gi|325948810|gb|EGD40904.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
          Length = 267

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 10/196 (5%)

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
            +            +     P  +IST +I     L  + +   L     +       GG
Sbjct: 73  FAFGLALGLVLALMRLSSVGPYRWISTGIIELFRGLPALVVFLVLGLGYSLAFGKQLPGG 132

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +       ++ +AL     A++AE +R+G+ AVP+GQ EAA  LG+TH +A   ++LPQA
Sbjct: 133 NI-----GTVTLALGLVGGAYMAETIRAGIQAVPKGQYEAARTLGMTHTRAMVTIVLPQA 187

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYL 375
            R I+PPLT++ + L K+SSL   +G +    +L + G   +N       ++ I    YL
Sbjct: 188 FRVILPPLTNELILLTKDSSLVYILGLSLDEYELTAFGREAMNANANLTPMVTI-ALCYL 246

Query: 376 SLSIMIALFMNRLNAK 391
            +++ +++ + R+ AK
Sbjct: 247 LITVPLSIVVRRMEAK 262



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             I++   NT      G      +G ++   RLS+     WI    +E+FR +P LVV  
Sbjct: 56  DVIVIALKNTIIYTACGFAFGLALGLVLALMRLSSVGPYRWISTGIIELFRGLPALVVFL 115

Query: 147 FLYKSVLSVL 156
            L        
Sbjct: 116 VLGLGYSLAF 125


>gi|313110215|ref|ZP_07796112.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
 gi|310882614|gb|EFQ41208.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           aeruginosa 39016]
          Length = 231

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 2/200 (1%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            + V   +L      +++       + L   Y  T ++ G+P  + + + Y         
Sbjct: 24  LAAVCVGLLLGLLGAIAKTSKYAALRFLGGTY--TTIVRGVPETLWVLMIYFGTVSGLNA 81

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F         F +  +AL     A+  E+ R  L++ PRG  EA  ALGL+  +  
Sbjct: 82  LGDLFGKPDLALSPFAAGTLALGLCFGAYATEVFRGALLSFPRGHREAGQALGLSPGRIF 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             ++LPQ  R  +P L + YL LLK+++L   +   +++       N T +     +   
Sbjct: 142 WRIVLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFTFYMTAA 201

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            IYLSL+++I + ++ L  +
Sbjct: 202 AIYLSLTVVIMVALHFLERR 221


>gi|206561694|ref|YP_002232459.1| glutamate/aspartate transport system permease [Burkholderia
           cenocepacia J2315]
 gi|198037736|emb|CAR53680.1| glutamate/aspartate transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 246

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVIPELLPASIGTWIKQLPPTTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  +  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVIPELLPASIGTWI 101


>gi|167841278|ref|ZP_02467962.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           thailandensis MSMB43]
          Length = 223

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 14/235 (5%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +   +    F +    + +        T   + +   V G  + L     SR    ++  
Sbjct: 1   MIFQTPFAMFDLTTFMQSMPLLGKAALTTVGVSLAGLVFGFFIGLAVCA-SRLSPNRSIS 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+   Y+  F    L   +L+           V             P  ++   A+S  +
Sbjct: 60  AIGAAYVFVFRGVPLLVQLLLVYYLLPFVGINV-------------PPLVAAVSAVSLCS 106

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA++AEI+R G ++VP G +EAA  LG+        + +PQA R  +P L ++ + L+K 
Sbjct: 107 AAYVAEILRGGFLSVPYGHIEAARMLGMRAFATLWRIKVPQATRLTLPSLANEMVLLIKA 166

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           SSL   VG A++      I   T + +E  L    IY  ++  +A F +    ++
Sbjct: 167 SSLISVVGVAEVTRTAQNIAASTYRPLEAYLAAGLIYFVINGTLAAFAHLAEHRL 221


>gi|163802097|ref|ZP_02195993.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159174238|gb|EDP59046.1| amino acid ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 246

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    K  +A+  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFGGQILLNNSLYSINETLNE 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFIASDPSHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  +P   + +L LLK ++L   +G  D+V V       T  
Sbjct: 152 YGMSPLMSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSSLAAGTTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  K ++  +
Sbjct: 212 PFTFYMAVAIIFLFFTSISTGLLKLVERKFSIHAR 246



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A ++G L    +L+  K    I  +Y  + R IP LV+
Sbjct: 7   YEASILKGALVTIEVAVLSLLLAVVLGMLGALAKLAPYKWARAIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +   +           L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFIASDPSHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|323525227|ref|YP_004227380.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382229|gb|ADX54320.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 237

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R   +K    L  LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSIPL-AVARVSKKKWLAGLVWLY--TYIFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++     +  +          +A +  T A+  EI    + A P G++EAA A G++
Sbjct: 84  SLEIVRNHE-LTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATPYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T Q+   
Sbjct: 143 SFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPDILKIARDVNSATYQSFNA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     R   +
Sbjct: 203 FGIAALLYLCISFALVWLFRRAERR 227



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A +  +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGLAITLWLLVVSIGLGFCLSIPLAVARVSKKKWLAGLVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR  P  V +   Y  + S+  + +H +   F     +  L   TL          
Sbjct: 62  YTYIFRGTPLYVQLLLCYTGLYSLEIVRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|222082276|ref|YP_002541641.1| octopine ABC transporter [Agrobacterium radiobacter K84]
 gi|221726955|gb|ACM30044.1| octopine ABC transporter [Agrobacterium radiobacter K84]
          Length = 239

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 2/215 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I +  + +GIV+  F    ++    +T + +   Y +         LV+  L + 
Sbjct: 26  WMTVLIAISGYAIGIVIGGFG-SWAKVSGGRTTRIVADTYTTVLRGIPD-LLVIYLLYFG 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +G+     G    P F++  +A+   + A   E+ R    AV RG++EAAIA 
Sbjct: 84  GSAAVTAMGRLFGAEGFVGFPGFLAGSLAVGITSGAQQTEVFRGAFKAVHRGEIEAAIAC 143

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++     R ++ P  +R  +P L + +  +LK S+L    G A+L+         TG  
Sbjct: 144 GMSRWLRFRRIVAPLTLRHALPGLGNVWQVVLKESALVSITGVAELLRQAQVGAGSTGLP 203

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  LI   +YL++S +  + M +         ++
Sbjct: 204 FDFYLIAGLLYLAISTVSGVLMRQAERYFNRGVRR 238


>gi|254438844|ref|ZP_05052338.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
 gi|198254290|gb|EDY78604.1| ABC transporter, permease protein [Octadecabacter antarcticus 307]
          Length = 790

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 18/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R +    L +       V S  LGI+L+L      R  +    K + + +I   +I G+P
Sbjct: 579 RQIGGFMLALIIGIAGIVLSLPLGILLAL-----GRQSNLFIVKKICVTFIE--VIRGVP 631

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V +            L    F+   T     + + I ++ + AA+IAE++R GL A+ 
Sbjct: 632 LIVWLFTG--------SLLLNYFLPPGTNFDLLLRVIIMVTLFAAAYIAEVIRGGLAALA 683

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E A +LGL++ ++ +L++LPQAM+  IP + + ++ L K++ L V +G +D +   
Sbjct: 684 TGQYEGADSLGLSYWQSMQLIVLPQAMKISIPGIVNTFIGLFKDTVLVVFIGLSDPIGFS 743

Query: 354 GTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I   T   G   E+ +    ++      +  +   L  K+  + +
Sbjct: 744 NLIRADTDWNGIYWELFVFIGALFFLFCFSMGRYSLYLEKKLQREHR 790



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 7/193 (3%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+    +  +G++ +  +G L+  GR S   +V  IC  ++EV R +P L+V  F    
Sbjct: 583 GFMLALIIGIAGIVLSLPLGILLALGRQSNLFIVKKICVTFIEVIRGVP-LIVWLFTGSL 641

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF-----VLGIVLSLFATR 206
           +L+    P  +  L   + +     +   +       +   +         + LS + + 
Sbjct: 642 LLNYFLPPGTNFDLLLRVIIMVTLFAAAYIAEVIRGGLAALATGQYEGADSLGLSYWQSM 701

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                 +    ++P +  +   +F    L V I L   + F   +    ++ G       
Sbjct: 702 QLIVLPQAMKISIPGIVNTFIGLFKDTVLVVFIGLSDPIGFSNLIRADTDWNGIYWELFV 761

Query: 266 FMSLYIALSCYTA 278
           F+     L C++ 
Sbjct: 762 FIGALFFLFCFSM 774


>gi|197295418|ref|YP_002153959.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944897|emb|CAR57506.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 216

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 13/183 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +  LYI  F   G P L+ + + +   F  P++            P +++
Sbjct: 42  RVSGSTVLRGVAKLYIEVF--QGTPLLMQLFIVF---FGLPLV--------GLDVPPWVA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
               L+ +T+A++AEI R  + AVP+GQ EA+ +L +++ +  R V+LPQA R  I P  
Sbjct: 89  ATAGLTFFTSAYLAEIWRGCVEAVPKGQWEASASLAMSYVEQLRHVILPQAARIAIAPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              +  +K+++L   +GF +L  VG  I N T +   +  +   IY +L   +  +   L
Sbjct: 149 GFGVQAVKDTALVSIIGFTELTKVGIAISNATFRPFVVYGLVALIYFALCYPLTRYARTL 208

Query: 389 NAK 391
             +
Sbjct: 209 QRR 211



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+    T  L+    +   ++G  +   R+S + ++  + ++Y+EVF+  P L+ +F +
Sbjct: 13  LLLAARWTIVLSIVSFVTGGLVGLGLLVMRVSGSTVLRGVAKLYIEVFQGTPLLMQLFIV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  +  V       +    G+                 A
Sbjct: 73  FFGLPLVGLDVPPWVAATAGLTFFTSAYLAEIWRGCVEA 111


>gi|150376685|ref|YP_001313281.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150031232|gb|ABR63348.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 219

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I   S V G VL +F   L+  +  +  + +   Y     I G P LVL+   Y +  
Sbjct: 24  VSISFLSIVAGTVLGVFVG-LALVYGYRPVRWIVRGYTDF--IRGTPVLVLVLASYYV-- 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F +  +AL+ + ++ + E+VR  L ++P+GQ EAA A+GLT
Sbjct: 79  ---------LSAIGIDLGPFQAGVLALAVFCSSHVGELVRGALQSIPKGQTEAAKAIGLT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VL PQA+R  +P   +    ++K S+L   +G  +L+     +I++T  ++E 
Sbjct: 130 FAQTFAYVLGPQALRQALPAWVNTAAEMVKASTLLSIIGVGELLLRTQEVISRTFMSLEF 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                F+Y  ++  I  F   +  K A+
Sbjct: 190 YFFAGFLYFVINYGIERFGRYVERKTAV 217



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   +  ++F  ++  T++G  VG   +   + V WI R Y +  R  P LV++   
Sbjct: 16  LFKGLGISVSISFLSIVAGTVLGVFVGLALVYGYRPVRWIVRGYTDFIRGTPVLVLVLAS 75

Query: 149 YKSV 152
           Y  +
Sbjct: 76  YYVL 79


>gi|256844625|ref|ZP_05550110.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           125-2-CHN]
 gi|262047083|ref|ZP_06020042.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           MV-3A-US]
 gi|295692449|ref|YP_003601059.1| glutamine ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|312984303|ref|ZP_07791647.1| glutamine ABC transporter (membrane protein) [Lactobacillus
           crispatus CTV-05]
 gi|256613166|gb|EEU18370.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           125-2-CHN]
 gi|260572660|gb|EEX29221.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           MV-3A-US]
 gi|295030555|emb|CBL50034.1| Glutamine ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|310894321|gb|EFQ43399.1| glutamine ABC transporter (membrane protein) [Lactobacillus
           crispatus CTV-05]
          Length = 217

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFV+G++L L      ++     G    
Sbjct: 2   ETFIHAYSWVDIRFLLQGLWVTIYVSLISIALSFVVGLILGLVRYMKIKYVSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+    +   AL  +  A 
Sbjct: 58  ------FIIDIIRNLPLLLIIFFTYFGLPQL--------GIVTNPTTASIAALVIFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ +V  GQME A + G+++ +A   V++PQA+ ++IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIGSVDSGQMEGARSNGMSYGQAMYHVIMPQALHNMIPALLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   ++   N L  K 
Sbjct: 164 ATIIVLPELLYHAQIIYSQNTTYLIPMYVIIAIMYFIVCFCLSTIANYLQKKY 216



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 36/71 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R    K V+ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|225420154|ref|ZP_03762457.1| hypothetical protein CLOSTASPAR_06497 [Clostridium asparagiforme
           DSM 15981]
 gi|225041211|gb|EEG51457.1| hypothetical protein CLOSTASPAR_06497 [Clostridium asparagiforme
           DSM 15981]
          Length = 219

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 11/226 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            G     + L      M T+ +IFV + V  + L L      R    +  + +   YIS 
Sbjct: 1   MGKMTVEQILIQLMGGMLTSVQIFVVTLVFSLPLGLVV-AFGRMSANRVVRTIVKGYIS- 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G P ++ + + Y   +       F    GS       +  I      AA+ AEI R
Sbjct: 59  -VMRGTPLMLQLMVVYFGPY-----YIFGLKLGSGYR--LWAALIGFVINYAAYFAEIYR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ ++P+GQ EAA  LG +  +    ++LPQ ++ I+P +T++ + L+K++SLA  +  
Sbjct: 111 SGIQSMPQGQYEAAKILGYSRGQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFTLSV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++ S+   +       I   +     Y   ++++AL M  L  K+
Sbjct: 171 MEMFSIAKMLAASQSNMIP-FIAAGLFYYVFNLIVALAMEGLEKKL 215



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 34/63 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + +  +    ++ +  +G +V  GR+SAN++V  I + Y+ V R  P ++ +  +
Sbjct: 13  LMGGMLTSVQIFVVTLVFSLPLGLVVAFGRMSANRVVRTIVKGYISVMRGTPLMLQLMVV 72

Query: 149 YKS 151
           Y  
Sbjct: 73  YFG 75


>gi|217958228|ref|YP_002336774.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|229137442|ref|ZP_04266053.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
 gi|217066252|gb|ACJ80502.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH187]
 gi|228646000|gb|EEL02223.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST26]
          Length = 214

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 114/217 (52%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +        F +  G          F++  +  L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILG----------FIVEVIRNL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P +G    I          ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 66  PLLLIIFFTYFALPEVGLKLEI--------ITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWSIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   + + I    VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGFIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++  V
Sbjct: 68  LLIIFFTYFALPEV 81


>gi|121608673|ref|YP_996480.1| glutamine ABC transporter permease [Verminephrobacter eiseniae
           EF01-2]
 gi|121553313|gb|ABM57462.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 228

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 13/240 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           +       +++ F   +    L            I VF  V G +L + +  L R +  +
Sbjct: 1   MEHRAWQGVIVDFDWSVIAGALPALFKGAQLTVLITVFGLVGGTLLGV-SFGLMRAYGGR 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
              +L   Y+   L+ G P +V +   Y   F  P L        S       +   ++ 
Sbjct: 60  MLSSLGWAYVG--LVRGTPIVVQVMFIY---FALPGLIGLRVDPMS-------AAIASII 107

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             + A+IAEIVR   ++VPRG  EA +A+GL H +    V+ P A R + P L +Q++  
Sbjct: 108 INSGAYIAEIVRGAFLSVPRGLAEAGLAMGLPHWRVLAFVVGPVAFRRMTPALGNQFIVS 167

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK++SL + +G  +L   G  I+    +A+EI      IYL L  ++ L +  L  ++ +
Sbjct: 168 LKDTSLFIVIGVGELTRQGQEIMATNFRAVEIWTAVAVIYLLLIGVLTLGLRVLEKRMRI 227



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 47/120 (39%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G   T  +   G++  T++G   G  R    ++++ +   YV + R  P +V + F
Sbjct: 24  ALFKGAQLTVLITVFGLVGGTLLGVSFGLMRAYGGRMLSSLGWAYVGLVRGTPIVVQVMF 83

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y ++  ++ +    +       + N G     +       +       G+ + L   R+
Sbjct: 84  IYFALPGLIGLRVDPMSAAIASIIINSGAYIAEIVRGAFLSVPRGLAEAGLAMGLPHWRV 143


>gi|86146432|ref|ZP_01064755.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85835695|gb|EAQ53830.1| amino acid ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 246

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ + S +L +VL      L++    +  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  LTIEVALLSLILAMVLG-MLGALAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P      ++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV  G+MEAA A G+    A R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDSGEMEAAKAYGMGPVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V V       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLEDMVRVSSLAAGSTKMPFTFYMTVAIIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G V T  +A   +I A ++G L    +L+  +    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|134290995|ref|YP_001114764.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134134184|gb|ABO58509.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 248

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 12/193 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R             YI  F   G P L+ + L Y        LGQF  I  S V P    
Sbjct: 44  RVSPHWLPNRFARAYILVF--RGSPLLIQMFLVYY------GLGQFGVIRESFVWPLLRD 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            +    ++L+  TA + AEIVR GL+AVP GQ+EA  ++GL+     R V+ P A+R  +
Sbjct: 96  PYACAVLSLALCTAGYTAEIVRGGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ +I   
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFVCAALIYLGLNFIIVRV 215

Query: 385 MNRLNAKIALKEK 397
           +  L  +++   +
Sbjct: 216 LGALEWRLSAHLR 228



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 35/80 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L     T  L F+ ++   ++  ++ A R+S + L     R Y+ VFR  P L+ +
Sbjct: 12  LRQLLAAVPTTLGLFFASLVLGGLLSLVIVAMRVSPHWLPNRFARAYILVFRGSPLLIQM 71

Query: 146 FFLYKSVLSVLPIPDHSIVL 165
           F +Y  +     I +  +  
Sbjct: 72  FLVYYGLGQFGVIRESFVWP 91


>gi|110633468|ref|YP_673676.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110284452|gb|ABG62511.1| general L-amino acid ABC transporter membrane protein
           [Chelativorans sp. BNC1]
          Length = 498

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 20/238 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                +         LT+         S  LGI+L+L      R  H    +   +++I 
Sbjct: 276 FGLQHVPTSQWGGLMLTLVVALTGIAASLPLGILLAL-----GRRSHLPAVRLFSIIFIE 330

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            +    L T VL    + +    P    FN         + +   I ++ ++AA++AE++
Sbjct: 331 FWRGVPLIT-VLFMSAFMIPLLLPEGVTFN---------QLLRALIGVAIFSAAYMAEVI 380

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL A+P+GQ E A ALGL + +  RLV++PQA++ +IP + + ++ L K++SL   +G
Sbjct: 381 RGGLQAIPKGQYEGAEALGLGYWQMMRLVIMPQAIKLVIPGIVNTFIGLFKDTSLVYIIG 440

Query: 346 FADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ADL+       +             ++   F+Y      ++ +   +  +     K+
Sbjct: 441 LADLLGTVRRGFSDPNWITPTTAATGLVFAGFVYWLFCFGMSRYSMFMERRFDTGHKR 498


>gi|299535498|ref|ZP_07048819.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298728698|gb|EFI69252.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 237

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 17/220 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVL 237
                  +   V+GI+++    +  +      +F+    +  P++     + FGLP LV 
Sbjct: 24  FMTITPVLLGIVIGIIVAFVRIQQIKIVSSVLNFYVSFFRGTPIIMHIMLVYFGLPMLV- 82

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
                       V    +    S   P    + +AL+    A+ +EI+RSG++AVP+GQ+
Sbjct: 83  ----------DSVANLLHLKIQSNSIPILFFVILALTLSAGAYASEIIRSGILAVPKGQL 132

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A+GLT  +A R  +LPQA    IP LT+ ++  L  +SLA  +   +L  V   I 
Sbjct: 133 EAAYAIGLTFPQAMRRYILPQAFGQSIPNLTNVFIGFLHATSLAFFLSIKELTGVANIIA 192

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   + +E  +    IY  +SI++    +R+  ++    K
Sbjct: 193 SMNLKFLESFIAVGLIYWGISIIVEWVSHRIEKRVTAYSK 232


>gi|227549082|ref|ZP_03979131.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078864|gb|EEI16827.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 310

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/288 (20%), Positives = 120/288 (41%), Gaps = 15/288 (5%)

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
                    +       +  +Y  +      L+  + L +   +     +          
Sbjct: 3   AVRASVLYDAPGPRARRLNTIYTFLTVIALALIGWWVLARLAENGQLDAEKWTPFVNANT 62

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     T+   A   + + + G+VL L      R    K  + L   +I  F   
Sbjct: 63  WTTYILPGLWGTIKAAALSILLALIFGVVLGL-----GRLAELKAVRWLCATFIEFF--R 115

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P L+L+   YQ      V+              F ++  AL+ Y  + IAEI+R+G+ 
Sbjct: 116 AIPVLLLMIFLYQFFAVFNVVPPRGL--------AFWAVVTALTLYNGSVIAEILRAGIR 167

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++PRGQ EAA ALG+TH +    +LLPQ++ +++P L +Q +  LK+S+L   +G+ ++V
Sbjct: 168 SLPRGQTEAAHALGMTHWQTMWKILLPQSVAAMLPALIAQMVIALKDSALGYQIGYVEVV 227

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G  + +     I  +++   I ++++  + +   R+  ++     +
Sbjct: 228 RSGTQVASSNSNYIPSLIVVAIIMIAINYALTMLATRVEKQLRAGRTR 275



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 22/157 (14%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R  N     +  + L +I  W +  +  N +                
Sbjct: 5   RASVLYDAPGPRARRLNTIYTFLTVIALALIGWWVLARLAENGQLD-------------- 50

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
               +   P+ + +++ T IL G   T   A   ++ A I G ++G GRL+  K V W+C
Sbjct: 51  ---AEKWTPFVNANTWTTYILPGLWGTIKAAALSILLALIFGVVLGLGRLAELKAVRWLC 107

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
             ++E FR IP L+++ FLY+       +P   +   
Sbjct: 108 ATFIEFFRAIPVLLLMIFLYQFFAVFNVVPPRGLAFW 144


>gi|167571225|ref|ZP_02364099.1| hypothetical protein BoklC_15392 [Burkholderia oklahomensis C6786]
          Length = 246

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 4/238 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++++ +V+      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLAAWLIALVVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVVPELLPASIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + +K
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMSFMRWVESK 236



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 47/95 (49%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLAAWLIALVVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVVPELLPASIGTWI 101


>gi|320353111|ref|YP_004194450.1| PAAT family amino acid ABC transporter membrane protein 2
           [Desulfobulbus propionicus DSM 2032]
 gi|320121613|gb|ADW17159.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 222

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 14/222 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+     +  +  + V S V G+V+ + A  L R F  +  + L   Y + F   
Sbjct: 7   FYQELLAALNRGLVMSLALIVPSAVGGVVIGISAGAL-RVFGARWLRWLGDGYAALF--R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P +V +   + L+F  P LG +           + +  I     + A+ +E VR  L+
Sbjct: 64  GTPLVVQL---FVLYFGLPNLGLY--------LSPYAAAVIGFVLCSGAYQSEYVRGALL 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ RGQ   A ALG T  +  R +++PQA+R  I    ++ + L+K SSLA  V   +L 
Sbjct: 113 SIKRGQYLGAQALGFTGWQTVRWIIVPQAVRRAIHGCGNEIIYLIKYSSLAYIVTCMELT 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G T+  +  +  E+  I    YL L  +    + R+  ++
Sbjct: 173 GEGKTVATEYFRFTEVFAIIGLYYLGLVTLAIFVLKRIEQRL 214



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G V +  L     +   +IG   GA R+   + + W+   Y  +FR  P +V +F 
Sbjct: 14  ALNRGLVMSLALIVPSAVGGVVIGISAGALRVFGARWLRWLGDGYAALFRGTPLVVQLFV 73

Query: 148 LYKSVLSV 155
           LY  + ++
Sbjct: 74  LYFGLPNL 81


>gi|256824980|ref|YP_003148940.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
 gi|256688373|gb|ACV06175.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
          Length = 245

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 21/238 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L+    T+      F   FVL +VL L      +       +     YI  
Sbjct: 23  FTGTWETMVLTAAKNTILYTLVAFTGGFVLAVVLVLM-----KLAPVAPFRWFATAYIEL 77

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   GLP L++I     + F  P+   +   GG+       +  + L     A++AE +R
Sbjct: 78  F--RGLPALLVILF---MGFGIPIATGWTPPGGTV-----GAGLVGLMLVAGAYMAETLR 127

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVP GQ+EAA +LG+T  +    V  PQA+R ++PPLT++ + L+K++SL   +GF
Sbjct: 128 AGIQAVPSGQVEAARSLGMTPAQTMASVTFPQALRIVVPPLTNELVILIKDTSLLFVLGF 187

Query: 347 A----DLVSVGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +L +     +N   +      ++    +YL++++ +   +  L  +   +  +
Sbjct: 188 MTHQKELTTAARDFMNAGPSAGTSTSLVFAALLYLAITLPLTQVVAWLERRQNRRSTR 245



 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 33/88 (37%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++ T +L    NT            ++  ++   +L+      W    Y+E+FR +P 
Sbjct: 24  TGTWETMVLTAAKNTILYTLVAFTGGFVLAVVLVLMKLAPVAPFRWFATAYIELFRGLPA 83

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L+VI F+   +            +  G+
Sbjct: 84  LLVILFMGFGIPIATGWTPPGGTVGAGL 111


>gi|126667886|ref|ZP_01738852.1| amino acid ABC transproter, permease protein [Marinobacter sp.
           ELB17]
 gi|126627702|gb|EAZ98333.1| amino acid ABC transproter, permease protein [Marinobacter sp.
           ELB17]
          Length = 224

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 107/229 (46%), Gaps = 15/229 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            + + + L    L +  LT+       V + +L  V ++      R         L +++
Sbjct: 5   NVEYMLGLVPVLLGYLPLTLQLAGVAMVMALILACVFAVV-----RVLGIPVLNQLTIVF 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           IS F   G P LV + L Y   +  P L         TV     +  + L+ + +A++AE
Sbjct: 60  ISFF--RGTPLLVQLFLFY---YGLPQL-----FSVLTVIDGVTATIMGLTLHFSAYMAE 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I V R Q EAA+++G+T+ +  R ++LPQA R  +P L + +++++K +SLA  
Sbjct: 110 SIRAAIIGVDRSQTEAALSIGMTNSQLMRRIILPQATRVALPTLMNYFIDMIKATSLAFT 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G  +L+       + +    E  ++   +Y  +  +++     L  ++
Sbjct: 170 LGVTELMGATQKEASGSFLYFEAFIVAAVMYWIVVEILSQLQKYLEIRL 218



 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 29/69 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L     T  LA   M+ A I+  +    R+    ++  +  V++  FR  P LV +F 
Sbjct: 15  VLLGYLPLTLQLAGVAMVMALILACVFAVVRVLGIPVLNQLTIVFISFFRGTPLLVQLFL 74

Query: 148 LYKSVLSVL 156
            Y  +  + 
Sbjct: 75  FYYGLPQLF 83


>gi|311106717|ref|YP_003979570.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 11 [Achromobacter
           xylosoxidans A8]
 gi|310761406|gb|ADP16855.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 11
           [Achromobacter xylosoxidans A8]
          Length = 229

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 21/232 (9%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLYI 224
                LS   +T+      +V +F + + L +         R     + +  + +PLL  
Sbjct: 8   QYQLLLSGMAVTVQLFLVAWVMAFAIAVTLVVVRATNLAPCRWLVDAYVEYHRNVPLLVQ 67

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F  FG+P L+    +  L+                 + E     IAL+  +AA+IAE 
Sbjct: 68  VLFWYFGMPELLPEGFRMWLY---------------QHNAEMSLAAIALALGSAAYIAED 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL A+P  Q EAA ALG ++ +  R V++PQA+R  IPPL  + L L KN+S+A+A+
Sbjct: 113 IRSGLRAIPFTQFEAARALGASYLQCMRFVIVPQAVRISIPPLVGRALLLFKNTSVAMAI 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  +L      I N+T +          +YL  S +I L  +R+  +  L  
Sbjct: 173 GVMELTYQAREIENETYRTFATFGAATIMYLLGSFLIMLIGSRIYDRYRLNR 224



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 33/85 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D+S    +L G   T  L     + A  I   +   R +      W+   YVE  RN+P 
Sbjct: 5   DASQYQLLLSGMAVTVQLFLVAWVMAFAIAVTLVVVRATNLAPCRWLVDAYVEYHRNVPL 64

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV + F Y  +  +LP      +  
Sbjct: 65  LVQVLFWYFGMPELLPEGFRMWLYQ 89


>gi|283956246|ref|ZP_06373726.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791966|gb|EFC30755.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 1336]
          Length = 247

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 120/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V+ +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVVSYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++      R    KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAIL-----RFSKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVVDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +   R S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|206967971|ref|ZP_03228927.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|228951133|ref|ZP_04113249.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|229068327|ref|ZP_04201630.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus F65185]
 gi|229077955|ref|ZP_04210564.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-2]
 gi|229177167|ref|ZP_04304556.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 172560W]
 gi|206736891|gb|EDZ54038.1| amino acid ABC transporter, permease protein [Bacillus cereus
           AH1134]
 gi|228606348|gb|EEK63780.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 172560W]
 gi|228705293|gb|EEL57670.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus Rock4-2]
 gi|228714788|gb|EEL66660.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus F65185]
 gi|228808543|gb|EEM55046.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 214

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGIL-------RYTKIPVVSQILGVIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFILVACMYFIVNYSLSILSRRLELR 214



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ I  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGVIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|328554364|gb|AEB24856.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens
           TA208]
 gi|328912768|gb|AEB64364.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens
           LL3]
          Length = 218

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 17/230 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F     +  L F          + + S +L  +  L A  L      +  K   +  +
Sbjct: 1   MDFSGAYTSDHLLFLWNGFLITLYVALISIILSFIFGLAAGTL------RYAKIPAVSGV 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++  +  L L+ + +   F  P +G    I          +   AL+ + +A ++EI
Sbjct: 55  IAAIVETIRNLPLLLIIFFTFFALPEIGIKLEIT--------AAAITALTIFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL +V +GQ+EAA + GLT+ +   LV++PQA+R ++PP+ SQ+++LLK++SLAV +
Sbjct: 107 IRSGLQSVEKGQIEAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L+     +  Q+   G    I L+   +Y +++  ++L   RL A+
Sbjct: 167 ALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYSLSLAARRLEAR 216



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 37/77 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S +   +  GF+ T ++A   +I + I G   G  R +    V+ +    VE  RN+P 
Sbjct: 8   TSDHLLFLWNGFLITLYVALISIILSFIFGLAAGTLRYAKIPAVSGVIAAIVETIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPI 158
           L++IFF + ++  +   
Sbjct: 68  LLIIFFTFFALPEIGIK 84


>gi|324324681|gb|ADY19941.1| glutamine ABC transporter permease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 214

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGIL-------RYMKIPIVSQILGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFMVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYMKIPIVSQILGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|317047306|ref|YP_004114954.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948923|gb|ADU68398.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 246

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK-IFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   ++ +F +G    +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWLWSGFQVTIAVSCCAWIIAFFVGSFFGILRTVPNRLLSTI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+    F     P LV  +L      +     QF           F S
Sbjct: 65  GTCYVELFRNIPLIVQFFFWYLVAPELVGESLGMWFKSELDPNIQF-----------FSS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +T A ++E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SVVCLGLFTGARVSEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++++I L M+ +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINLVIMLLMSLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 10/108 (9%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
            +    G   + A F           +++Y   +  GF  T  ++    I A  +G+  G
Sbjct: 2   GIDWNWGIFLQPAPFG----------NTTYLGWLWSGFQVTIAVSCCAWIIAFFVGSFFG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
             R   N+L++ I   YVE+FRNIP +V  FF Y     ++       
Sbjct: 52  ILRTVPNRLLSTIGTCYVELFRNIPLIVQFFFWYLVAPELVGESLGMW 99


>gi|21910156|ref|NP_664424.1| putative ABC transporter (permease) [Streptococcus pyogenes
           MGAS315]
 gi|28896145|ref|NP_802495.1| ABC transporter (permease) [Streptococcus pyogenes SSI-1]
 gi|71903352|ref|YP_280155.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS6180]
 gi|21904349|gb|AAM79227.1| putative ABC transporter (permease) [Streptococcus pyogenes
           MGAS315]
 gi|28811395|dbj|BAC64328.1| putative ABC transporter (permease) [Streptococcus pyogenes SSI-1]
 gi|71802447|gb|AAX71800.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS6180]
          Length = 216

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 8/174 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+
Sbjct: 50  LHYLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAY 101

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSL
Sbjct: 102 ISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSL 161

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 162 AAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWIIAFLLERYQEFLENKLAL 215


>gi|330882634|gb|EGH16783.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 365

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K+V  +  +  + IV  + +     GL+    +      + +    +GIV 
Sbjct: 112 PLFISKFQRKAVYGIAFLVIYPIVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+ L + ++  LV LP
Sbjct: 229 -------KLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMDLGYWRSMGLVFLP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPI 158
           +   +P 
Sbjct: 217 LPLFMPE 223


>gi|294497134|ref|YP_003560834.1| glutamine ABC transporter permease GlnP [Bacillus megaterium QM
           B1551]
 gi|294347071|gb|ADE67400.1| glutamine ABC transporter, permease protein GlnP [Bacillus
           megaterium QM B1551]
          Length = 216

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 15/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F    +   LSF         K+   S VL  ++      L      +  +   L ++
Sbjct: 1   MDFMGAYSPDHLSFLMEGFWVTLKVAFISIVLSFLIGSIVGIL------RYARIPVLSHV 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F++  +  L L+ + +  +F  P +G    I          +  +AL+ + +A I+EI
Sbjct: 55  LAFVVEIIRNLPLLLIIFFTYFALPEIGIDMEITS--------AAIVALTVFESAMISEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL ++ +GQ+EAA + GL + +  R V+LPQA+R ++PPL SQ+++LLK++SLAV +
Sbjct: 107 IRSGLKSIEKGQIEAARSSGLNYYQTLRFVVLPQALRRMVPPLVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL+     I  Q     + + LI   +Y  ++  +++   RL  K
Sbjct: 167 ALPDLLHNAQIIYGQKQSYVVPMFLIIAMMYFIVNYALSIIARRLEVK 214



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 44/79 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              + + ++ GF  T  +AF  ++ + +IG++VG  R +   +++ +    VE+ RN+P 
Sbjct: 8   SPDHLSFLMEGFWVTLKVAFISIVLSFLIGSIVGILRYARIPVLSHVLAFVVEIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPD 160
           L++IFF Y ++  +    +
Sbjct: 68  LLIIFFTYFALPEIGIDME 86


>gi|24636876|sp|Q8RQL4|GLUD_COREF RecName: Full=Glutamate transport system permease protein gluD
 gi|20126700|dbj|BAB88901.1| gluD [Corynebacterium efficiens]
          Length = 277

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 107/239 (44%), Gaps = 15/239 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D               L     T+       + + ++G +L L      R    +  +  
Sbjct: 14  DKWTPFLDPQTWTTYLLPGLWGTLKAAVASILLALIMGTLLGL-----GRISEIRLLRWF 68

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             + I TF    +P L+L+   YQL     ++         +    F ++   L+ Y  +
Sbjct: 69  CGIIIETF--RAIPVLILMIFAYQLFARYQLVP--------SRQLAFAAVVFGLTMYNGS 118

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            IAEI+RSG+ ++P+GQ EAAIALG++ R+ T  +LLPQA+ +++P L +Q +  LK+S+
Sbjct: 119 VIAEILRSGIASLPKGQREAAIALGMSTRQTTWSILLPQAVAAMLPALIAQMVIALKDSA 178

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L   +G+ ++V  G    +     +  + +   I + ++  +     R+  ++     +
Sbjct: 179 LGYQIGYIEVVRSGIQSASVNRNYLAALAVVAVIMILINFALTALAERIQRQLRAGRAR 237



 Score = 74.6 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 49/98 (50%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
                P+    ++ T +L G   T   A + ++ A I+GTL+G GR+S  +L+ W C + 
Sbjct: 13  GDKWTPFLDPQTWTTYLLPGLWGTLKAAVASILLALIMGTLLGLGRISEIRLLRWFCGII 72

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           +E FR IP L+++ F Y+       +P   +     +F
Sbjct: 73  IETFRAIPVLILMIFAYQLFARYQLVPSRQLAFAAVVF 110


>gi|301052296|ref|YP_003790507.1| ABC transporter permease [Bacillus anthracis CI]
 gi|300374465|gb|ADK03369.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus biovar anthracis str. CI]
          Length = 214

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 19/215 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      + SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIILSFIIGSVIGIL-------RYMKIPVVSQILGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           I  Q     I   ++   +Y  ++  +++   RL 
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLE 212



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   +I + IIG+++G  R     +V+ I  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIILSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|288960750|ref|YP_003451090.1| amino acid ABC transporter permease protein [Azospirillum sp. B510]
 gi|288913058|dbj|BAI74546.1| amino acid ABC transporter permease protein [Azospirillum sp. B510]
          Length = 215

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + +   +LG V+ +    ++R    +       +Y+S F    L   +L+      
Sbjct: 19  TTIWVSLLGVLLGQVIGVAVC-VARQSGGRAADIAGGVYVSFFRGVPLLIQLLLIYYMLP 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                V             P  ++   AL   + A+++EI R  L AVP GQ EAA+ALG
Sbjct: 78  LIGIDV-------------PPLVASIAALGLASGAYVSEIYRGALNAVPHGQSEAALALG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
                    +LLPQA R  +P L ++ + LLK SSL   VG A+L     TI     + +
Sbjct: 125 FPGWSIWSRILLPQAFRISVPALVNELILLLKASSLISVVGVAELTRTSQTISASNYRPL 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           EI L    IYL+++  +ALF   +  ++
Sbjct: 185 EIYLAAGLIYLAINGALALFGTLVERRL 212


>gi|254173468|ref|ZP_04880141.1| amino acid ABC transporter permease protein [Thermococcus sp. AM4]
 gi|214032877|gb|EEB73706.1| amino acid ABC transporter permease protein [Thermococcus sp. AM4]
          Length = 225

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 8/210 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V  F+ G  L      ++R +  K  KAL   YI   LI G P L+ +   Y +
Sbjct: 16  VTLELTVVGFIGGFALGFLL-AVARTYGGKLSKALSTAYIE--LIRGTPMLLQL---YII 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P++ +  F     V    ++  + +   +AA+ AE +R    +V  GQ+EAA++LG
Sbjct: 70  GFGLPLVIRNYFP--HFVMNPTLAAALGMVINSAAYQAEYIRGAFNSVEYGQVEAALSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T     R V+ PQA R ++P  T++ + LLK SSLA+ +   +L+       +QT    
Sbjct: 128 MTKWGIIRHVIFPQAFRIMLPSWTNEMVYLLKYSSLAMLLAVPELMYQASVAASQTFLYA 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +I L+   IYL  + +I   M ++  ++ +
Sbjct: 188 QIYLVVAGIYLVFATLIIGIMRKIELRLHI 217



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            + A  +L G V T  L   G I    +G L+   R    KL   +   Y+E+ R  P L
Sbjct: 4   ETIARYLLHGLVVTLELTVVGFIGGFALGFLLAVARTYGGKLSKALSTAYIELIRGTPML 63

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLP 166
           + ++ +   +  V+       V+ 
Sbjct: 64  LQLYIIGFGLPLVIRNYFPHFVMN 87


>gi|153853349|ref|ZP_01994758.1| hypothetical protein DORLON_00747 [Dorea longicatena DSM 13814]
 gi|149754135|gb|EDM64066.1| hypothetical protein DORLON_00747 [Dorea longicatena DSM 13814]
          Length = 216

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 99/210 (47%), Gaps = 11/210 (5%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M  +A+IF+ + +  + L L      R       + +  LYIS  ++ G P ++ + + Y
Sbjct: 14  MWISAEIFILTLLFSLPLGLVV-AFGRMSKIAPVRWISKLYIS--IMRGTPLMLQLMVVY 70

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F    L       G  +     ++ I  +   AA+ AEI R G+ A+P GQ EAA  
Sbjct: 71  ---FGPYYLFGMRISTGYRM----TAVLIGFAINYAAYFAEIYRGGIEAIPVGQYEAAKV 123

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG +  +    ++ PQ  + I+P +T++ + L+K++SLA  +   ++ ++   I      
Sbjct: 124 LGYSKGQTFFRIVFPQVCKHILPAVTNEIITLVKDTSLAFVLAVTEMFTMAKQIAAA-QT 182

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++   +     Y   ++++A+ M ++  K+
Sbjct: 183 SMVPYIAAGIFYYVFNLLVAMIMEKIEEKL 212



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 31/68 (45%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +  G   +  +    ++ +  +G +V  GR+S    V WI ++Y+ + R  P ++
Sbjct: 5   TLIRELGGGMWISAEIFILTLLFSLPLGLVVAFGRMSKIAPVRWISKLYISIMRGTPLML 64

Query: 144 VIFFLYKS 151
            +  +Y  
Sbjct: 65  QLMVVYFG 72


>gi|146342963|ref|YP_001208011.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp.
           ORS278]
 gi|146195769|emb|CAL79796.1| glutamate/aspartate ABC transporter (permease protein)
           [Bradyrhizobium sp. ORS278]
          Length = 230

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 110/226 (48%), Gaps = 11/226 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   +   T T+   A       V G ++++      R    +    +  LY+       
Sbjct: 15  SYLFIDGMTFTLTLTALSAFGGLVFGTLIAMM-----RLSGYRVMGWIAGLYVDF----- 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLI 290
           + +L L+ + +  +F  P +GQ+       +    F S  I    + AA+ +EI+R+G+ 
Sbjct: 65  MRSLPLVLVIFWFYFLVPYIGQWITGSSRPIKVGAFASSLITFIMFEAAYFSEIMRAGIQ 124

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ RGQ  AA ALGLT+ +  R V+LPQA R+++P L +Q + L +++SL   +   D +
Sbjct: 125 SISRGQPAAASALGLTYAQTMRYVVLPQAFRNMLPVLLTQTIVLFQDTSLVYVLSIPDFL 184

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +  + G+ +E+ L    +Y ++S + +  + RL ++IA+  
Sbjct: 185 GAASKVAQRDGRLVEMYLFAALVYFTISCIASYGVRRLQSRIAIIR 230



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 34/72 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  L         + GTL+   RLS  +++ WI  +YV+  R++P ++VIF+ 
Sbjct: 18  FIDGMTFTLTLTALSAFGGLVFGTLIAMMRLSGYRVMGWIAGLYVDFMRSLPLVLVIFWF 77

Query: 149 YKSVLSVLPIPD 160
           Y  V  +     
Sbjct: 78  YFLVPYIGQWIT 89


>gi|163938565|ref|YP_001643449.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|229131585|ref|ZP_04260468.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
 gi|163860762|gb|ABY41821.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           weihenstephanensis KBAB4]
 gi|228651876|gb|EEL07830.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus BDRD-ST196]
          Length = 214

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFVVNYGLSILSRRLEIR 214



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|222102792|ref|YP_002539831.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
 gi|221739393|gb|ACM40126.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
          Length = 226

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 4/212 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   I VF    G+   +    L R  H    +     Y + F   G P LV I + Y  
Sbjct: 19  TTLLIAVFGIGFGLPFGVLL-ALGRGSHNHVLRRTCDFYCAIF--RGTPMLVQIFVIYYG 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 + Q N I    +     +  +A+   T A+ AEI RS L+++PRG +EAA A G
Sbjct: 76  LAQISFVRQ-NPILWWMIGNGLHAAILAVILNTCAYTAEIFRSALLSLPRGLIEAAEACG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++       V  P A+R  +P  +S+   ++K SSLA  +   ++      ++++T   +
Sbjct: 135 MSGWHIFIRVKFPLALRQALPAYSSEVAIIVKESSLASTITVLEITGYAKRLMSETFAIM 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +I +I    YL+++++  + +  +  +++   
Sbjct: 195 DIFIITAAFYLAINVIALMALKFIERRLSFSR 226



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A  G+      G L+  GR S N ++   C  Y  +FR  P LV IF +
Sbjct: 13  LLTGAKTTLLIAVFGIGFGLPFGVLLALGRGSHNHVLRRTCDFYCAIFRGTPMLVQIFVI 72

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           Y  +  +  +  + I+   
Sbjct: 73  YYGLAQISFVRQNPILWWM 91


>gi|306827502|ref|ZP_07460785.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|304430300|gb|EFM33326.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 216

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+
Sbjct: 52  YLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSLA 
Sbjct: 104 EVFRSSIEAIDKGQWEAAKALGLPYGLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 164 MITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|295094949|emb|CBK84040.1| ABC-type amino acid transport system, permease component
           [Coprococcus sp. ART55/1]
          Length = 137

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 74/130 (56%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +     + A+I+EI+R G+++V  GQME   A+GL+       +++PQA+++I+P L 
Sbjct: 7   AMLVFGLNSGAYISEIMRGGILSVDPGQMEGGRAMGLSFSTTMLKIVIPQAVKNILPTLG 66

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +++++L+K +S+   VG  DL      I + + + +   L+   IY+ + ++I+L +  +
Sbjct: 67  NEFISLIKETSVVSFVGATDLYVAFNYIGSNSYEFMVPYLVMALIYIVMVLLISLGIKLM 126

Query: 389 NAKIALKEKK 398
              +   +++
Sbjct: 127 ERSLRKSDRR 136


>gi|270261142|ref|ZP_06189415.1| transporter [Serratia odorifera 4Rx13]
 gi|270044626|gb|EFA17717.1| transporter [Serratia odorifera 4Rx13]
          Length = 222

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 105/224 (46%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + + + ++ +VLSL  T +      KT    PL+ I   L  G P 
Sbjct: 4   FLPEIIKGLHTSLTLTITALIVALVLSLLLTVI---LTLKTPILTPLVKIYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P + ++ ++      P ++   IAL+  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPAIREYPWLWNLLSQP-WLCAMIALALNSAAYTTQLFYGAVRAIPA 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++  ++   +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCEALGMSRSQSL-RILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      +YL ++ ++ L M  +  +    E++
Sbjct: 179 LMYGRTYDVM-VFGAAGLVYLCVNGLLTLLMRIVERRALAFERR 221



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 38/113 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   +  L  + +I A ++  L+         ++  + ++Y+ +F   P LV IF +
Sbjct: 8   IIKGLHTSLTLTITALIVALVLSLLLTVILTLKTPILTPLVKIYITLFTGTPLLVQIFLI 67

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y        I ++  +           +    L          +  V  I   
Sbjct: 68  YYGPGQFPAIREYPWLWNLLSQPWLCAMIALALNSAAYTTQLFYGAVRAIPAG 120


>gi|262164526|ref|ZP_06032264.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
 gi|262026906|gb|EEY45573.1| amino acid ABC transporter permease protein [Vibrio mimicus VM223]
          Length = 298

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYIST 226
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L    
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 227 FLIFGL--PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              F +    + L+ L   L +    +        G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI +I    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWIIVGAAYLVLCLTLSMLFKQVEKR 291



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGI-------VPYTSD-SSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           + +T          L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYHWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI---------- 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  + + L            
Sbjct: 85  VLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRY 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +            L    L+      +   +++  IV +  A      +       
Sbjct: 145 HTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|229010073|ref|ZP_04167287.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
 gi|228751206|gb|EEM01018.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           mycoides DSM 2048]
          Length = 214

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +          +  G          F++  +  L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILG----------FIVEVIRNL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P  G    I          +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 66  PLLLIIFFTYFALPEAGLKLEI--------ITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFILAACMYFVVNYGLSILSRRLEIR 214



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ I    VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQILGFIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|227329655|ref|ZP_03833679.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 242

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 112/228 (49%), Gaps = 11/228 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                +FP   +   A   + S + GI  ++  T L        G    LL +       
Sbjct: 12  YLMWGTFPDGPLGGAALTLMMSLLAGIASAILGTILGVALAMSRGWWSALLAMVLGFFRA 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A
Sbjct: 72  IPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ +A ++LGL+  +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  
Sbjct: 122 IGRGQWQAGLSLGLSRWQVLWQIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTF 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   + N++    +E+ L    +Y    + + L  N +NA+   +EK+
Sbjct: 182 LATQVNNRSMVYPMEVFLFVALVYFVFCLSLELLANGVNARFNQQEKQ 229


>gi|27379090|ref|NP_770619.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27352240|dbj|BAC49244.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 216

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 15/211 (7%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
                  +   +F   + L L   R+SR    +        +  T  I  + ++ LI L 
Sbjct: 17  RWTVALVVLALAFGAPLALGLAMGRISRFAGLR--------WTMTACIQVIQSVPLIGLL 68

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +  +F  PV             P  +++ +A + YTAAF+ EI R GL AV + Q EA  
Sbjct: 69  FFFYFGMPVFLG-------IQVPALVAVTVAYTLYTAAFLGEIWRGGLEAVKQAQWEAGA 121

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            LGL+  +  R ++ PQA+R  +PP     + L+K +SLA  +GF +L   G  +   T 
Sbjct: 122 CLGLSAWQQFRHIIAPQALRLSLPPTVGFLVQLIKGTSLASILGFVELARAGQVVSAATF 181

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           Q +    +   IY +L + + L+   L A++
Sbjct: 182 QPLLTYALVAAIYFALCLPLTLWSRSLEARL 212


>gi|218457946|ref|ZP_03498037.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Kim 5]
          Length = 161

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 5/159 (3%)

Query: 244 LHFDKPVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           L    P+L Q   +             ++++ IA + + +AF+ EI R  + AVP+GQ E
Sbjct: 3   LFQGTPLLMQLFVVYYGVALLGIDVNAWLAVAIAFTLHASAFLGEIWRGSIEAVPKGQSE 62

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL +    R V+LPQA++  +P      + L+K +SLA  VGF +L   G  I N
Sbjct: 63  AANALGLHYVSRMRDVILPQALKISMPATIGFLVQLIKGTSLAAIVGFIELTRAGQIISN 122

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QT + + +  +   IY  +   ++   + L  ++A   +
Sbjct: 123 QTYRPLLVFGVVGVIYFIICWPLSHLGSGLEKRMAKAVR 161


>gi|139439229|ref|ZP_01772671.1| Hypothetical protein COLAER_01685 [Collinsella aerofaciens ATCC
           25986]
 gi|133775253|gb|EBA39073.1| Hypothetical protein COLAER_01685 [Collinsella aerofaciens ATCC
           25986]
          Length = 217

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 11/218 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +         + ++FV + +  I L +      R       + +  +YIS  ++ G P 
Sbjct: 6   MMQMLGQGFLVSLQLFVLTLLGSIPLGI-PVAFMRMSKIAPLRWIARIYIS--VMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ +   Y   +       + F    T   ++ +  +A     A + AEI RSGL ++PR
Sbjct: 63  MLQMFAIYFAPY-------YVFGISLTPDSKWTACVVAFIINYAGYFAEIYRSGLQSIPR 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG +  +    +++PQ  + I+P + ++ + L+K++SLA A+G  ++ S   
Sbjct: 116 GQYEAAEVLGYSRVQTFLYIVMPQVAKRILPAMGNEIITLVKDTSLAFAIGVGEMFSTAK 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++  +  ++    I   IY   + ++ + +     K+
Sbjct: 176 ALVA-SQVSMVPFAIAALIYWVFNFVVEMLLGAAEKKL 212



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 32/63 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  GF+ +  L    ++ +  +G  V   R+S    + WI R+Y+ V R  P ++ +F +
Sbjct: 10  LGQGFLVSLQLFVLTLLGSIPLGIPVAFMRMSKIAPLRWIARIYISVMRGTPLMLQMFAI 69

Query: 149 YKS 151
           Y +
Sbjct: 70  YFA 72


>gi|33592663|ref|NP_880307.1| glutamine ABC transporter permease protein [Bordetella pertussis
           Tohama I]
 gi|33601951|ref|NP_889511.1| glutamine ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
 gi|33572309|emb|CAE41863.1| glutamine transport system permease protein [Bordetella pertussis
           Tohama I]
 gi|33576389|emb|CAE33467.1| glutamine transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 219

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L           KI  +  V G V+      ++R +       L  +Y+
Sbjct: 1   MDFDWSVIGTALPNLLDGTLMTVKITFWGLVGGFVVGALIG-VARAYGPLWLAGLAQVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P++ +              +    L   + A+IAEI
Sbjct: 60  --AVIRGTPIVVQVMFIY---FALPLMIE------GMRVDAVAAAIATLIINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L++V +G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK+SSL + +
Sbjct: 109 VRGSLLSVHKGLKEAGQAMGLPFYKILLYIIGPVAFRRMIPPLGNQCIISLKDSSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  I+    +A+EI      +YL L+  +AL +  L  ++ +
Sbjct: 169 GVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGTMALGLRMLEKRMRI 218



 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F G++   ++G L+G  R      +A + +VYV V R  P +V + F+
Sbjct: 15  LLDGTLMTVKITFWGLVGGFVVGALIGVARAYGPLWLAGLAQVYVAVIRGTPIVVQVMFI 74

Query: 149 YKSVLSV 155
           Y ++  +
Sbjct: 75  YFALPLM 81


>gi|167617347|ref|ZP_02385978.1| glutamine ABC transporter permease protein [Burkholderia
           thailandensis Bt4]
 gi|257141204|ref|ZP_05589466.1| glutamine ABC transporter permease protein [Burkholderia
           thailandensis E264]
          Length = 218

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 11/227 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
           M  +   +      +    ++ VF    G+        ++  F      AL +L      
Sbjct: 1   MQFDWSAIWAALPDLTDGVRLTVFIAFFGLAGGFLVGMIAGMFRAYGPAALNVLTQVYIE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI G P +V +     L+F  P+L      G         +  +A++  + A++AE+VR 
Sbjct: 61  LIRGTPIVVQVMF---LYFALPMLAHIRIDG-------LTAAIVAITLNSGAYLAEVVRG 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L+++P+G  EA +A+GL+  +    ++ P A R +I PL +Q +  LK++SL + +G  
Sbjct: 111 ALLSIPKGVTEAGLAMGLSMPRVLVKIVGPLAFRRLIAPLGNQCIVSLKDTSLFIVIGVG 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L   G  II    QA+EI      IYL+L+ ++ L +  +  ++ +
Sbjct: 171 ELTRKGQEIIAGNFQAVEIWTAVAAIYLALTGVMTLTLRFVEKRMRI 217


>gi|160941893|ref|ZP_02089220.1| hypothetical protein CLOBOL_06789 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435390|gb|EDP13157.1| hypothetical protein CLOBOL_06789 [Clostridium bolteae ATCC
           BAA-613]
          Length = 226

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 11/227 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      + L +    ++    + + S V  +V+ +    +S   + K      +L I
Sbjct: 6   MKFNWSYFFQTLPYIASKLNVTLTLTIISAVFSLVIGMVFAIIS---YYKVKGVSQVLKI 62

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P    +   Y    +   L               +++ + +S    AF++E 
Sbjct: 63  WISFVRGTPVAAQLFFFYYGLANLSSL--------ILNMSPTVAVAVIMSLNMGAFVSES 114

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  LI+V  GQ EAA+A G+T  + T  +++PQA+R  +PPL +  +NL K SSLA  V
Sbjct: 115 IRGALISVDEGQREAAMAFGMTGFQMTIRIVIPQAIRVALPPLFNDLINLFKMSSLAFLV 174

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  D++         T Q  E     M IY  +++++      L  +
Sbjct: 175 GVRDVMGAAKIEGANTFQFFECYACVMLIYWVITLILTAIQKVLEKR 221


>gi|90409071|ref|ZP_01217196.1| histidine transport system permease protein HisM [Psychromonas sp.
           CNPT3]
 gi|90309828|gb|EAS37988.1| histidine transport system permease protein HisM [Psychromonas sp.
           CNPT3]
          Length = 224

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 94/229 (41%), Gaps = 7/229 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +F+N             +      + +LG+ +++ A  +      K  K    LY+
Sbjct: 1   MDFSIFVNEYSFYLQGAWTTVHLVGT--ALILGLFIAIPAGIIC-SSQCKILKVPVHLYM 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ + + Y        L   +          +    +AL+  T A+ AEI
Sbjct: 58  YFF--RGTPLLIQLFIIYYGSGQFEALR--DSWLWEYFQEAWFCALLALTLNTGAYTAEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  ++ +P+G++EAA A G++     + + LP A+R  +P  +++ + ++  S++   V
Sbjct: 114 VRGVIVTMPKGELEAAKAYGMSAWLILKRITLPNALRRALPVYSNEIIFMIHGSAITGLV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              D+      + ++     E  L    +Y+ L+  +     R     A
Sbjct: 174 TIVDITGAARVVNSRYYAPFEAYLAAAVLYMCLTFSVIYIFKRWEMHYA 222



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 35/102 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  L  + +I    I    G    S  K++     +Y+  FR  P L+ +F +
Sbjct: 13  YLQGAWTTVHLVGTALILGLFIAIPAGIICSSQCKILKVPVHLYMYFFRGTPLLIQLFII 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y        + D  +   F        L+    T    A+I 
Sbjct: 73  YYGSGQFEALRDSWLWEYFQEAWFCALLALTLNTGAYTAEIV 114


>gi|312883551|ref|ZP_07743276.1| ABC transporter permease protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368774|gb|EFP96301.1| ABC transporter permease protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 246

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 84/204 (41%), Gaps = 7/204 (3%)

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKPVLGQ 253
           S+   R     +    + +P L +   + FG   L+  +L             + P    
Sbjct: 43  SMGWARAIATTYTTIIRGIPDLVLMMLIFFGGQMLLNNSLYAINESINEWFSSNNPEHEW 102

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
             ++        F++  + +     A++AE  R  ++AV +G++EAA A G++     R 
Sbjct: 103 VAYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMSSLMTFRR 162

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           VLLPQ +R  +P   + +L LLK ++L   +G  D+V +       T       +    I
Sbjct: 163 VLLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKMPFTFYMAVAII 222

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           +L  + +    +  +  K ++  +
Sbjct: 223 FLFFTSVSTGLLKLVERKFSIHAR 246


>gi|268608242|ref|ZP_06141969.1| polar amino acid ABC transporter, inner membrane subunit
           [Ruminococcus flavefaciens FD-1]
          Length = 164

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            N I   T +  F  + +A     AA+ AEI R G+ +VP GQ EAA ALG +  +    
Sbjct: 23  LNGIDIKTDTYTFRMILVAFVLNYAAYFAEIFRGGIESVPIGQYEAAGALGFSRTQTFFR 82

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ ++ ++P  +++ + L+K++SLA A+ + +++ +    +  T  ++  + +    
Sbjct: 83  IILPQVIKRVVPASSNEIITLVKDTSLASAIPYMEVMYIAKKQV-PTYASLMPLFMAGLF 141

Query: 374 YLSLSIMIALFMNRLNAKI 392
           Y   + ++ L    +  K+
Sbjct: 142 YFIFATVLTLLFTYVEKKL 160


>gi|70729651|ref|YP_259390.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68343950|gb|AAY91556.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 218

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 20/236 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L   +      L    +T+      FV S ++G+V +L      R        ++ L 
Sbjct: 1   MFLQNALDFLPILLKGAVVTLQVTVGSFVLSSLIGLVFALMMVSKVR--------SVALF 52

Query: 223 YISTF-LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            I    +I GLP +V +   Y           F             +  I L    +A+ 
Sbjct: 53  AIGVVNVIRGLPIIVQLFYIY-----------FVLPDFGIQLTAMQAGVIGLGIAYSAYQ 101

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+G+ A+ +GQ+EAA ++G+      R V+LPQA+R  +PP  +  + +LK+SSL 
Sbjct: 102 AENFRAGIQAIHQGQIEAAESIGMRGPMIMRRVVLPQALRIALPPYGNTLVMMLKDSSLV 161

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +  A++   G  I + T + + +  +   +YL+LS+ ++  + RL A+I+ + K
Sbjct: 162 STITVAEMTRAGQLIASSTFENMTVYTLVALLYLALSLPLSFALRRLEARISTRRK 217



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +     + +++IG +     +S  + VA      V V R +P +V +F++
Sbjct: 13  LLKGAVVTLQVTVGSFVLSSLIGLVFALMMVSKVRSVALFAIGVVNVIRGLPIIVQLFYI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +               G+ +               A 
Sbjct: 73  YFVLPDFGIQLTAMQAGVIGLGIAYSAYQAENFRAGIQAI 112


>gi|15890700|ref|NP_356372.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158969|gb|AAK89157.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 235

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 5/224 (2%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  N   ++     ++    IF+ S+ L + L+L    + R    + G  L   Y+S   
Sbjct: 9   ILSNQEYIAMLLHGIEMTFIIFIGSWSLAMSLALILLCI-RFSPSRFGDRLVAAYVS--Y 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              +PTLV + L Y   F     G   ++        F    + L    AA+ +E +RSG
Sbjct: 66  HRNVPTLVQLMLWYFGIFTLLPSGLTGWLTEHNAEAIF--AVVGLGLCQAAYFSEDLRSG 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +V  GQMEAA ALG ++  A R +++PQ +R+ +PPL +  ++L KNSSLA+ +G ++
Sbjct: 124 LRSVSPGQMEAAKALGHSYLSAMRFIIMPQGVRNALPPLINHSVSLFKNSSLALVIGASE 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L      I N + Q  EI L+   +YL  S++I      L+ ++
Sbjct: 184 LTHAVKEIENLSFQTFEIYLVGTVLYLFFSLLIMGAGAYLSMRL 227



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 4/96 (4%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +GF++   +    S+  Y   +L G   TF +       A  +  ++   R S ++    
Sbjct: 2   SGFDLSAIL----SNQEYIAMLLHGIEMTFIIFIGSWSLAMSLALILLCIRFSPSRFGDR 57

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +   YV   RN+P LV +   Y  + ++LP      
Sbjct: 58  LVAAYVSYHRNVPTLVQLMLWYFGIFTLLPSGLTGW 93


>gi|260770437|ref|ZP_05879370.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii CIP 102972]
 gi|260615775|gb|EEX40961.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii CIP 102972]
 gi|315181508|gb|ADT88421.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii NCTC 11218]
          Length = 216

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 88/222 (39%), Gaps = 11/222 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +           +         S +  +   L    ++     +      ++ +   L 
Sbjct: 1   MMQFTDWDIFRSLLMAARWTVALSLIAFVGGGLLGLLITLLRSTRHSVFTGVIKLYVELF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  ++L+ +++AF  +I R  +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLSLVGVEVSAWTAAVLSLTLFSSAFFHDIWRGCI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+GQ EA   LGL++ +  R ++ PQA R  I P     + ++K ++LA  +GF +L
Sbjct: 110 ESLPKGQWEACRTLGLSYLQTMRYIIAPQAARLAIAPTVGFSVQIVKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              G  + N T Q  ++  +   +Y ++   ++     L  +
Sbjct: 170 TKAGTMLNNATFQPFKVFALVALLYFAICFPLSALARYLETR 211


>gi|225862620|ref|YP_002747998.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
 gi|225789877|gb|ACO30094.1| amino acid ABC transporter, permease protein [Bacillus cereus
           03BB102]
          Length = 214

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|302388264|ref|YP_003824086.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302198892|gb|ADL06463.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 244

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 14/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +    +T+  +      +  LG+V  +F+T        K  K +  +Y+    I 
Sbjct: 18  FPEYYIPGFLMTLKISLVGLAVALALGVVFGMFSTA-----KFKLLKIISRIYVEF--IQ 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P  + +   Y +    P+L    F       P+F+   I +  Y  A+I+E++R+G+ 
Sbjct: 71  NTPLALQVLCYYSV---LPML----FSSSGFRIPKFVLGVIGVGVYHGAYISEVIRTGIE 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EAA + G ++ +    ++LPQ ++ I+PPL +Q LNL+KN+S+   V   DL+
Sbjct: 124 AIPKGQSEAASSQGFSYLETMYHIILPQTIKIIMPPLANQALNLVKNTSILAMVAGMDLM 183

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +     G   +       +Y  +   +A     L  +
Sbjct: 184 YFTDSWGADRGYFAQAYFTSAIMYFIICFPLARLARYLEIR 224



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             + GF+ T  ++  G+  A  +G + G    +  KL+  I R+YVE  +N P  + +  
Sbjct: 21  YYIPGFLMTLKISLVGLAVALALGVVFGMFSTAKFKLLKIISRIYVEFIQNTPLALQVLC 80

Query: 148 LYKSVLSVL 156
            Y  +  + 
Sbjct: 81  YYSVLPMLF 89


>gi|296533469|ref|ZP_06896049.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
 gi|296266204|gb|EFH12249.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Roseomonas cervicalis ATCC 49957]
          Length = 384

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 16/250 (6%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHF 211
            +      +V+   M+    GLS+          I +     GI  +        L R  
Sbjct: 145 AVIWVATLVVIGVLMWGGVLGLSYVPQERWGGLVITLILSTFGIAFAFPLSILVALGRRS 204

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                K L +LY+       L +L+ +A           +    F+       + +   I
Sbjct: 205 RMPAIKLLCILYVELIRGVPLISLLFMA----------SVMFPLFLPEGINIDKLLRAQI 254

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A+  + AA++AE+VR GL A+P+GQ EAA ALGL++ + T  ++LPQA+R +IPPL + +
Sbjct: 255 AIILFAAAYLAEVVRGGLQALPKGQYEAAEALGLSYWQKTGFIILPQALRLVIPPLVNTF 314

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +   K++SL + +G  DL++ G T I      G  IE+ ++   IY      ++ +   L
Sbjct: 315 IGFFKDTSLVLIIGIFDLLTAGKTAIVEPAWQGFGIEVYVVVGLIYFVFCFAMSRYSQNL 374

Query: 389 NAKIALKEKK 398
            A++     +
Sbjct: 375 EAELNRHRVR 384



 Score = 44.2 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 33/74 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T  L+  G+  A  +  LV  GR S    +  +C +YVE+ R +P + ++F     
Sbjct: 176 GLVITLILSTFGIAFAFPLSILVALGRRSRMPAIKLLCILYVELIRGVPLISLLFMASVM 235

Query: 152 VLSVLPIPDHSIVL 165
               LP   +   L
Sbjct: 236 FPLFLPEGINIDKL 249


>gi|152965463|ref|YP_001361247.1| polar amino acid ABC transporter inner membrane protein
           [Kineococcus radiotolerans SRS30216]
 gi|151359980|gb|ABS02983.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
          Length = 282

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 17/235 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
                 +  F      +          K+ + + +L +VL+      +R  H +  + + 
Sbjct: 44  QFAPSKWSPFSYTDIQTALLGAWWQTMKVALVAILLSVVLAAVLAS-ARLSHARALRRVA 102

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
              I  F     P L+L+               + F G     P +    + L+ Y  AF
Sbjct: 103 YGLIQLF--RAPPVLLLMF--------------WFFYGSGGDVPLYWCGVLGLTVYNGAF 146

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+R+G+ A+P+GQ EA +A+GLT  +    + LPQA+RS++P L SQ + +LK+S+L
Sbjct: 147 LAEILRAGVEALPKGQREAGLAVGLTESQVLWTIQLPQAVRSMLPSLVSQIVVILKDSAL 206

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +G+++L+  G  + +Q    I  +L+   +Y+  +++IA     +  +++ K
Sbjct: 207 IYIIGYSELLRWGTQLGSQYFNLIPAMLVIAVVYVGTNMVIAAIAKVVERRMSTK 261



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             P++      TA+L  +  T  +A   ++ + ++  ++ + RLS  + +  +    +++
Sbjct: 50  WSPFSYTD-IQTALLGAWWQTMKVALVAILLSVVLAAVLASARLSHARALRRVAYGLIQL 108

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPD 160
           FR  P L+++F+ +      +P+  
Sbjct: 109 FRAPPVLLLMFWFFYGSGGDVPLYW 133


>gi|186476916|ref|YP_001858386.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193375|gb|ACC71340.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 237

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 93/228 (40%), Gaps = 2/228 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLY 223
           +   +    R   +      T   I ++  V+ I L    +           K +   ++
Sbjct: 1   MIELIQQYWRNYLYTDGYRFTGVAITLWLLVISIGLGFCLSVPLAVARVSKKKWVAGSVW 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T++  G P  V + L Y   +   ++   N +  +          +A +  T A+  E
Sbjct: 61  LYTYIFRGTPLYVQLLLCYTGLYSLEIIRS-NALTNAFFRDGMHCTLLAFTLNTCAYTTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A  
Sbjct: 120 IFAGAIKATPYGEIEAARAYGMSQFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               D++ +   + + T ++ +   I   +YL +S  +     R   +
Sbjct: 180 ATVPDILKIARDVNSATYRSFDAFGIAALLYLIISFALVWLFRRAERR 227



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y      G   T WL    +     +   +   R+S  K VA    +
Sbjct: 5   IQQYWRNYLYTDGYR---FTGVAITLWLLVISIGLGFCLSVPLAVARVSKKKWVAGSVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR  P  V +   Y  + S+  I  +++   F     +  L   TL          
Sbjct: 62  YTYIFRGTPLYVQLLLCYTGLYSLEIIRSNALTNAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|732704|emb|CAA57063.1| gluD [Corynebacterium glutamicum]
          Length = 273

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 112/235 (47%), Gaps = 11/235 (4%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                   +    ++    +    K  VFS +L +V+      L R    +  +    + 
Sbjct: 11  NKWTPFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALG-LGRISEIRILRWFCAVI 69

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I TF    +P L+L+   YQ+        Q+N +  S +   F ++   L+ Y  + IAE
Sbjct: 70  IETF--RAIPVLILMIFAYQMF------AQYNIVPSSQLV--FAAVVFGLTMYNGSVIAE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+ SG+ ++P+GQ EAAIALG++ R+ T  +LLPQA+ +++P L SQ +  LK+S+L   
Sbjct: 120 ILCSGIASLPKGQKEAAIALGMSSRQTTWSILLPQAVAAMLPALISQMVIALKDSALGYQ 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G+ ++V  G    +     +  + +   I + L+  +    +R+  ++     +
Sbjct: 180 IGYIEVVRSGIQSASVNRNYLAALFVVALIMIVLNFSLTALASRIERQLRAGRAR 234



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 49/95 (51%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             P+ +  ++ T IL G   T   A   +I A ++GT +G GR+S  +++ W C V +E 
Sbjct: 13  WTPFINSQTWTTYILPGLWGTLKSAVFSVILALVMGTALGLGRISEIRILRWFCAVIIET 72

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           FR IP L+++ F Y+       +P   +V    +F
Sbjct: 73  FRAIPVLILMIFAYQMFAQYNIVPSSQLVFAAVVF 107


>gi|15888716|ref|NP_354397.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15156458|gb|AAK87182.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 219

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L       + + SF     L        R   +K+ +     Y+  F  
Sbjct: 4   FSTWDILRNLLLATRWTVLLSLVSFAG-GGLVALLLLFMRISRKKSMRVFARYYVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F         P +++  + L  + AAF+ EI R  +
Sbjct: 61  QGTPLLMQLFIAF-----------FGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V +GQ EA+ +L +   +  R V+LPQAMR  IPP    ++ ++K +++   +GF +L
Sbjct: 110 ESVAKGQWEASASLAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 170 SKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 217



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 35/109 (32%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S       +L+    T  L+        ++  L+   R+S  K +    R YVE+F+  P
Sbjct: 5   STWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTP 64

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            L+ +F  +  +  V       +     + L               +  
Sbjct: 65  LLMQLFIAFFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVA 113


>gi|163742411|ref|ZP_02149798.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384361|gb|EDQ08743.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 250

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I + +F +G+++ LF     + +     +   LL I T +I  +P LVLI + Y +  
Sbjct: 36  LQIALGAFGMGLIIGLFG-AYGKLYGGPILRD--LLAIYTTVIRAVPELVLILILYYVGT 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D       +F  G       ++    L     A+  E++R  + AVP GQ+EAA + G+ 
Sbjct: 93  DLINKVAGSFGYGRVEISGIVAGIWVLGIVQGAYATEVLRGAIKAVPPGQIEAARSYGMP 152

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M    P L + +L   K+++L   VGFA+L        + T      
Sbjct: 153 PFMTMRRVTIPAMMSFATPGLANLWLIATKDTALLAIVGFAELTLETRQAASSTRAYFTF 212

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L    +YL +++  ++    +  
Sbjct: 213 FLAAGALYLMVTLCSSVIFGWIER 236


>gi|70728432|ref|YP_258181.1| general amino acid ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68342731|gb|AAY90337.1| general amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 365

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 16/264 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL +  F  K++  +  +  + I+    +     GLS    +      + +    +GI  
Sbjct: 112 PLFISRFPRKAIYGLCFLVGYPIIAYSLLHGGYLGLSTVATSQWGGLMLTLVIATVGIAG 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +L       L R  +    + + + +I  +    L T VL      L    P    F+  
Sbjct: 172 ALPLGILLALGRRSNLPAIRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMNFD-- 228

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   I +  + +A++AE+VR GL A+P+GQ EAA A+GL + +A  LV+LP
Sbjct: 229 -------KLLRALIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRAMGLVILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    ++
Sbjct: 282 QALKLVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAALVF 341

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
                 ++ +   L  K+    K+
Sbjct: 342 WIFCFGMSRYSMHLERKLDTGHKR 365



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 72  IDQGIVP--YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           I   ++   Y   S+ AT+   G + T  +A  G+  A  +G L+  GR S    +  +C
Sbjct: 135 IAYSLLHGGYLGLSTVATSQWGGLMLTLVIATVGIAGALPLGILLALGRRSNLPAIRVVC 194

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
             ++E +R +P + V+F     +   LP 
Sbjct: 195 VTFIEFWRGVPLITVLFMSSVMLPLFLPE 223


>gi|254252792|ref|ZP_04946110.1| Amino acid ABC transporter permease protein [Burkholderia dolosa
           AUO158]
 gi|124895401|gb|EAY69281.1| Amino acid ABC transporter permease protein [Burkholderia dolosa
           AUO158]
          Length = 237

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG V ++    ++R   +K        Y  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASVSLGFVCAVPL-AVARVSKKKWVSMPVRFY--TYVFRGTPLYVQLLLMYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   + +  +     F    +A +  T A+  EI    + A+P G++EAA A G
Sbjct: 82  MYSLEFVRSHSLL-DAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T     + V+LP A+R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MTPFTMYQRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSTTYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   IYL++S  +     R    
Sbjct: 201 QSFGIAALIYLAVSFALVAVFRRAERH 227



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  K V+   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASVSLGFVCAVPLAVARVSKKKWVSMPVRFYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|307308009|ref|ZP_07587727.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306901413|gb|EFN32017.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 549

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 15/207 (7%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPTLVLIALKYQLHFDKPVL 251
           VL I+L L        F     +  PL   S F+   I G+P LV++     L+   P+ 
Sbjct: 354 VLAIILGLL------TFGGYLHRRHPLAIGSEFVVDTIRGIPMLVIV-----LYVGLPLS 402

Query: 252 GQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           G   +   G    P  M   +A++   +A++AEI RSG+ A+P GQ+EAA ++GL   + 
Sbjct: 403 GALKDATQGVLDPPNLMRGIVAMALAYSAYLAEIFRSGINAIPIGQIEAARSIGLNRWQT 462

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            RLV+LPQA R IIPPL ++ + +LK++SL   +   D+        + +          
Sbjct: 463 ARLVVLPQAFRIIIPPLGNELIAILKDTSLLSILSIRDITQRMREFQSASFLPFAPYNSA 522

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
              Y+ L++  A  +N +  K  +K +
Sbjct: 523 AIFYIFLTLAAASLINMIERKYDIKHR 549


>gi|295702500|ref|YP_003595575.1| glutamine ABC transporter permease GlnP [Bacillus megaterium DSM
           319]
 gi|294800159|gb|ADF37225.1| glutamine ABC transporter, permease protein GlnP [Bacillus
           megaterium DSM 319]
          Length = 216

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 15/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F    +   LSF         K+   S VL  ++      L      +  +   L ++
Sbjct: 1   MDFMGAYSPDHLSFLMEGFWVTLKVAFISIVLSFLIGSIVGIL------RYARIPVLSHV 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F++  +  L L+ + +  +F  P +G    I          +  +AL+ + +A I+EI
Sbjct: 55  LAFIVEIIRNLPLLLIIFFTYFALPEIGIDMEITS--------AAIVALTVFESAMISEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL ++ +GQ+EAA + GL + +  R V+LPQA+R ++PPL SQ+++LLK++SLAV +
Sbjct: 107 IRSGLKSIEKGQIEAARSSGLNYYQTLRFVVLPQALRRMVPPLVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL+     I  Q     + + LI   +Y  ++  +++   RL  K
Sbjct: 167 ALPDLLHNAQIIYGQKQSYVVPMFLIIAMMYFIVNYALSIIARRLEVK 214



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 44/79 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              + + ++ GF  T  +AF  ++ + +IG++VG  R +   +++ +    VE+ RN+P 
Sbjct: 8   SPDHLSFLMEGFWVTLKVAFISIVLSFLIGSIVGILRYARIPVLSHVLAFIVEIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPD 160
           L++IFF Y ++  +    +
Sbjct: 68  LLIIFFTYFALPEIGIDME 86


>gi|75765094|ref|ZP_00744383.1| Glutamine transport system permease protein glnP [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218895696|ref|YP_002444107.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228899327|ref|ZP_04063590.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 4222]
 gi|74487418|gb|EAO51345.1| Glutamine transport system permease protein glnP [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218541097|gb|ACK93491.1| amino acid ABC transporter, permease protein [Bacillus cereus
           G9842]
 gi|228860358|gb|EEN04755.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 4222]
          Length = 214

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFMVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|318604769|emb|CBY26267.1| glutamate Aspartate transport system permease protein GltK
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 224

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +   AKI + + V GIV       + R    K        Y
Sbjct: 1   MYEFDWSSIAPSLPYLLQGLAVTAKITLIAIVFGIVWGTVL-AVMRLSPVKAISWFATAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNVFRSIP---LVMVLLWFYL--VVPSLLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E++L    +Y  +S   ++ +N L  +
Sbjct: 175 LSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISFSASMLINYLKKR 222



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S +     +L G   T  +    ++   + GT++   RLS  K ++W    YV VFR
Sbjct: 5   DWSSIAPSLPYLLQGLAVTAKITLIAIVFGIVWGTVLAVMRLSPVKAISWFATAYVNVFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           +IP ++V+ + Y  V S+
Sbjct: 65  SIPLVMVLLWFYLVVPSL 82


>gi|238789895|ref|ZP_04633675.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia frederiksenii ATCC 33641]
 gi|238721968|gb|EEQ13628.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia frederiksenii ATCC 33641]
          Length = 323

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 72/339 (21%), Positives = 130/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P        T +++G +          +   +   +   GR  
Sbjct: 33  WVFIHARFG-QFMYGLYPIDQRWRINTTLIIGLLT---------LIPLLWRAMPRRGRYL 82

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           A  +V               PL V   LY                     +  R     T
Sbjct: 83  AGWMV-------------TYPLFVWMMLYGGFF-------------GLSLVETRQWGGLT 116

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L     +R       + L +++I  +    L T++ ++ 
Sbjct: 117 LTLIIAAVGIAGALPLGILLAL-----ARRSSMPVVRILSVVFIEFWRGVPLITVLFMS- 170

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 171 ---------SVMLPLFMTEGTSIDKLIRALVGVVLFQSAYVAEVVRGGLQALPKGQTEAA 221

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 222 ESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 281

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 282 AWLGMSTEGYVFAAAVYWIFCFSMSRYSQHLEKRFHTGR 320


>gi|227355081|ref|ZP_03839492.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Proteus mirabilis ATCC 29906]
 gi|227164868|gb|EEI49715.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Proteus mirabilis ATCC 29906]
          Length = 249

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 9/228 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  +N          D   +    +  + ++  + +  L             +   
Sbjct: 1   MDFTVIADNWQYLLFGAYPDGPLEGAALTIFISVIAGIVSIILGTLGGIALAMLKGVWVN 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                 G    + +I L + L+F  PV+            PE  ++  AL+  T+++IA 
Sbjct: 61  LFAAFLGFFRAIPVIMLIFWLYFLLPVVLGMEI-------PEITTVICALALITSSYIAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V++G++A+ +GQ +A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  
Sbjct: 114 GVKAGILAIGKGQWQAGLSLGFNRWQTLWYIVLPQALRMMVPSFINQWIALIKDTSLAYV 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           VG  +L  +   + N++    +E+ L   FIY  L   + L  NR+  
Sbjct: 174 VGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLELIANRVGK 221


>gi|330942130|gb|EGH44787.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. pisi str. 1704B]
          Length = 219

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 6/194 (3%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQFNFIGGSTVS--P 264
                  AL   YI  F       +++I   +   +D  VL     Q  F   STV    
Sbjct: 1   SGSPLLAALAWGYIWFFRSMPALLVLIILYNFAYLYDHIVLGVPFTQLVFAEWSTVDVLS 60

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F    + LS   +A+ AEI+R GLI V  GQ EAA ALGL   +    ++LPQA+RSI+
Sbjct: 61  QFTVAVLGLSLMQSAYTAEIIRGGLIGVDAGQHEAAAALGLPVSRRIFRIILPQALRSIL 120

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   ++ + L+K +S+   +   +L      I N+T   I ++++    YL ++ ++   
Sbjct: 121 PSGFNEIIGLVKGTSIVYVLALPELFYTVQVIYNRTQAVIPLLIVATVWYLIITTVLTSA 180

Query: 385 MNRLNAKIALKEKK 398
              +    A    +
Sbjct: 181 QYYVERHFARGSAR 194


>gi|238752138|ref|ZP_04613620.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia rohdei ATCC 43380]
 gi|238709611|gb|EEQ01847.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia rohdei ATCC 43380]
          Length = 346

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 70/339 (20%), Positives = 130/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P        T++++G +          +       +   GR  
Sbjct: 56  WVFIHARFG-QFMYGLYPIEQRWRINTSLIIGLLT---------MIPLFWRAMPHRGRYL 105

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
              ++A              PL+V   LY                     +        T
Sbjct: 106 VVWMLA-------------YPLLVWVMLYGGFF-------------GLSRVETHQWGGLT 139

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L     +R       + L +++I  +    L T++ ++ 
Sbjct: 140 LTLIIAAVGIAGALPLGILLAL-----ARRSSMPVVRILSVIFIEFWRGVPLITVLFMS- 193

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 194 ---------SVMLPLFMTEGTSIDKLIRALVGVVLFQSAYVAEVVRGGLQALPKGQTEAA 244

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 245 ESLGLGYWKTQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 304

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 305 AWLGMSTEGYVFAAAVYWIFCFSMSRYSQHLEKRFHTGR 343


>gi|229042504|ref|ZP_04190249.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH676]
 gi|228726857|gb|EEL78069.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH676]
          Length = 214

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALIAIVLSFIIGSVIGIL-------RYTKIPVVSQVLGVIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNVQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALIAIVLSFIIGSVIGILRYTKIPVVSQVLGVIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|15641864|ref|NP_231496.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121587311|ref|ZP_01677083.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121727133|ref|ZP_01680307.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|153818859|ref|ZP_01971526.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153823972|ref|ZP_01976639.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|153825182|ref|ZP_01977849.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|153830541|ref|ZP_01983208.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|183179515|ref|ZP_02957726.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227081991|ref|YP_002810542.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229508041|ref|ZP_04397546.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae BX 330286]
 gi|229511720|ref|ZP_04401199.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae B33]
 gi|229515242|ref|ZP_04404702.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae TMA 21]
 gi|229518858|ref|ZP_04408301.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae RC9]
 gi|229520322|ref|ZP_04409748.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae TM 11079-80]
 gi|229529115|ref|ZP_04418505.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae 12129(1)]
 gi|229607588|ref|YP_002878236.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae MJ-1236]
 gi|254848948|ref|ZP_05238298.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|298498099|ref|ZP_07007906.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9656391|gb|AAF95010.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548471|gb|EAX58529.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121630511|gb|EAX62903.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|126510587|gb|EAZ73181.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126518509|gb|EAZ75732.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|148873971|gb|EDL72106.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|149741161|gb|EDM55212.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-2]
 gi|183012926|gb|EDT88226.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|227009879|gb|ACP06091.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229332889|gb|EEN98375.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae 12129(1)]
 gi|229342688|gb|EEO07680.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae TM 11079-80]
 gi|229343547|gb|EEO08522.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae RC9]
 gi|229347947|gb|EEO12906.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae TMA 21]
 gi|229351685|gb|EEO16626.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae B33]
 gi|229355546|gb|EEO20467.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae BX 330286]
 gi|229370243|gb|ACQ60666.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae MJ-1236]
 gi|254844653|gb|EET23067.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|297542432|gb|EFH78482.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 260

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------PVLGQFNF 256
             R     +    + +P L +   + FG   L+   L +   F         P      +
Sbjct: 60  WARAIATLYTTIIRGIPDLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAY 119

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LL
Sbjct: 120 LPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILL 179

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  IP   + +L LLK ++L   +G  D+V +       T       +    I+L 
Sbjct: 180 PQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLF 239

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + +    +  L  K ++  +
Sbjct: 240 FTSVSTGLLKLLERKFSIHTR 260



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A ++G L    +++  +    I  +Y  + R IP LV+
Sbjct: 21  YEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVL 80

Query: 145 IFFLYKSVLS--------VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++                  +  +            L          A +    F+ 
Sbjct: 81  MMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFIF 140

Query: 197 GIVLS 201
           G  ++
Sbjct: 141 GAYMA 145


>gi|328470443|gb|EGF41354.1| arginine transporter permease subunit ArtQ [Vibrio parahaemolyticus
           10329]
          Length = 229

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 7/212 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G++L++     S     +     P     T +      LV++ + + 
Sbjct: 15  WMTVQLAFTSLLVGLILAVVFA--SGEMSRRVFVKWPTTAFVTVVRGLPEILVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  +ALS   A++ ++ +R  L AV RGQ EAA AL
Sbjct: 73  -----STQVLFLITGDFIEVSPFLSGVVALSLIFASYASQTLRGALKAVGRGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GISQFHAFVRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    IYL ++++    +  ++ K +++
Sbjct: 188 FTWYATAAAIYLVITLITQRAVKVIDKKFSIQ 219


>gi|167564083|ref|ZP_02356999.1| hypothetical protein BoklE_16117 [Burkholderia oklahomensis EO147]
          Length = 246

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 4/238 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++++ +V+      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLAAWLIALVVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA-L 273
              A+  +Y+S F    +P +V   + Y +  +        +I       +F +  IA L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVVPELLPASIGTWIKQLPPGTQFFTASIACL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPRGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  + +K
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMSFMRWVESK 236



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 47/95 (49%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++ +  + A ++G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLMSGFWVTVKVSLAAWLIALVVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVVPELLPASIGTWI 101


>gi|16262717|ref|NP_435510.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|14523343|gb|AAK64922.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 228

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 14/224 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L      +     +       GI L +F   +S        + L  L
Sbjct: 1   MDYTFQFGPLLNYLPQIVSGLWLTIGLSFVGIFGGIALGIFCAVMSTLS-SPIPRLLVRL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   ++   P LV I + +           F             S++IAL      ++A
Sbjct: 60  YVE--VVRNTPLLVQIFVIF-----------FGLPNIGIRLSPLTSVFIALVLNNGGYVA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ A  R Q+EAA +LGL++ +  R V+LP A+  +  P+ SQ + L+ ++SL  
Sbjct: 107 EIVRGGIEATHRSQVEAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           A+G  DL        ++T + +EI L+   +Y+ L+ +    +N
Sbjct: 167 AIGVEDLTGAAMIASSETFRTMEIYLVVAMVYVVLNFVFRAVLN 210



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 41/95 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    +Y   I+ G   T  L+F G+     +G         ++ +   + R+YVEV RN
Sbjct: 7   FGPLLNYLPQIVSGLWLTIGLSFVGIFGGIALGIFCAVMSTLSSPIPRLLVRLYVEVVRN 66

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            P LV IF ++  + ++         +   + LNN
Sbjct: 67  TPLLVQIFVIFFGLPNIGIRLSPLTSVFIALVLNN 101


>gi|332076441|gb|EGI86904.1| putative ABC-type amino-acid transporter permease protein
           [Streptococcus pneumoniae GA41301]
          Length = 137

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/129 (36%), Positives = 76/129 (58%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           + P + +  + +  Y  A+IAE++RSG+ ++P GQMEAA++ G T+  A RL++LPQA R
Sbjct: 1   MIPIYWTAVLCVGLYHGAYIAEVIRSGIQSIPSGQMEAALSQGFTYISAMRLIILPQAFR 60

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PPLT+Q +NL+KN+S    +   DL+ V  +     G  I   L    +Y +L   +
Sbjct: 61  IILPPLTNQIVNLIKNTSTVAIISGVDLMFVTKSWSALNGNYIPAFLGAALLYFALCFPV 120

Query: 382 ALFMNRLNA 390
           A F  ++  
Sbjct: 121 AQFGRKMEQ 129


>gi|329117796|ref|ZP_08246513.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326908201|gb|EGE55115.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 267

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 80/184 (43%), Gaps = 2/184 (1%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLY 270
            +     P+  +    + G P LV + L Y     F K +   +         P      
Sbjct: 69  NRVKVLYPIQAVFVSFLRGTPILVQLMLTYYGIPLFLKYLNLTYGLNWNINAIPASFFAI 128

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
            A +   AA+++E +R+ +++V  G++EAA +LG+++++  + V++P A     P L + 
Sbjct: 129 TAFAFNEAAYMSETIRAAILSVDDGEIEAAKSLGMSNKQVYQRVIVPNAAVVATPTLING 188

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L K +SLA   G  ++ +    +     +  E  +    +Y  +S  +      +  
Sbjct: 189 LIGLTKGTSLAFNAGIVEMFAQAQILGGSDYRYFERYISVALVYWLISFFVEQLGAYIER 248

Query: 391 KIAL 394
           ++A+
Sbjct: 249 RMAI 252


>gi|269967642|ref|ZP_06181692.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269827729|gb|EEZ82013.1| amino acid ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 172

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 6/166 (3%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            L  G P LV + L Y        + QF  +  +     +    +A    T+A+ AEI+R
Sbjct: 5   LLFRGTPLLVQLYLIYY------GMDQFFPVKDTLWENAWFCALVAFILNTSAYTAEIIR 58

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             +  +P+G++EAA A G++     R ++LP A+R  +P  +++ + +L  S++A  V  
Sbjct: 59  GAINGLPKGEVEAAKAYGMSKFMTYRRIILPSALRRALPAYSNEVIFMLHGSAVAGIVTI 118

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            DL      + ++     E  L     Y++L+ MI         + 
Sbjct: 119 MDLTGAARLVNSRYYAPFESFLTAGLFYMALTFMILWCFKVAERRF 164


>gi|254508524|ref|ZP_05120642.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219548549|gb|EED25556.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 246

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    +  +A+  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQILLNNSLYSINESLNE 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EA  A
Sbjct: 92  WFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAGKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  +P   + +L LLK ++L   +G  D+V V       T  
Sbjct: 152 YGMSPIMSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSALAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  K ++  +
Sbjct: 212 PFTFYMAVAMIFLLFTSISTGLLKVVERKFSIHAR 246



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A ++G L    +++  +    I  +Y  V R IP LV+
Sbjct: 7   YEASIFKGAIVTIEVALLSLLLAVVLGMLGALAKMAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINESLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|149191816|ref|ZP_01870053.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148834334|gb|EDL51334.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 246

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 99/233 (42%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ + S +L + L      L++    K  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  LTIEVAILSLLLAMFLG-MLGALAKLAPYKWARAIATLY--TTIIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYAVNEWLNNWFMSSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV +G+MEAA A G++   A R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDKGEMEAAKAYGMSSVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V V       T       +    I+L  + +   F+  +  K ++  +
Sbjct: 194 GLEDMVRVSSLAAGSTKMPFTFYMSVAIIFLLFTSISTGFLKLVERKFSIHVR 246



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G V T  +A   ++ A  +G L    +L+  K    I  +Y  + R IP LV+
Sbjct: 7   YEASILKGAVLTIEVAILSLLLAMFLGMLGALAKLAPYKWARAIATLYTTIIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + +V    ++  +           L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYAVNEWLNNWFMSSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|300313888|ref|YP_003777980.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076673|gb|ADJ66072.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 217

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +     F   ++     +   +FVLG         L+R       +   +L+I    + 
Sbjct: 5   FSWTYFFFMVQSIGWTLVLSALAFVLGGAGGFLVM-LARISPHAWLRRPAILFIE--CVQ 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L+L+ + Y           F       V P  ++  +A+  YT+A++ +I R  + 
Sbjct: 62  GIPLLILLFIVY-----------FGLSVYGLVLPALVAAGLAMMIYTSAYLGDIWRGCVE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PR Q EA+  L LT  +  RLV++PQA R  +PP     + L+K +SLA  +GF +L 
Sbjct: 111 AMPRPQWEASECLSLTRWQTLRLVIIPQATRLSLPPTIGFLVQLIKMTSLASVIGFVELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  I N   Q   + L+    Y  L   ++ +   +  K+ +  +
Sbjct: 171 RAGQIINNSIFQPFLVFLLVGSFYFLLCYPLSRWSASMERKLNVSHR 217



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 36/106 (33%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y   ++     T  L+    +     G LV   R+S +  +     +++E  + IP 
Sbjct: 6   SWTYFFFMVQSIGWTLVLSALAFVLGGAGGFLVMLARISPHAWLRRPAILFIECVQGIPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L+++F +Y  +     +    +     M +               A
Sbjct: 66  LILLFIVYFGLSVYGLVLPALVAAGLAMMIYTSAYLGDIWRGCVEA 111


>gi|167586677|ref|ZP_02379065.1| histidine transport system permease protein [Burkholderia ubonensis
           Bu]
          Length = 237

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG V ++    ++R   +K        Y  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASISLGFVCAVPL-AVARVSKKKWVSMPVRFY--TYVFRGTPLYVQLLLMYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   + +  +     F    +A +  T A+  EI    + A+P G++EAA A G
Sbjct: 82  MYSLEFVRSHSLL-DAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T       V+LP A+R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MTPFTMYCRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   IYL++S  +     R    
Sbjct: 201 QSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  K V+   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKKKWVSMPVRFYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|51473329|ref|YP_067086.1| glutamine transport system permease protein GlnP [Rickettsia typhi
           str. Wilmington]
 gi|81692320|sp|Q68XN8|GLNP_RICTY RecName: Full=Putative glutamine transport system permease protein
           glnP
 gi|51459641|gb|AAU03604.1| glutamine transport system permease protein GlnP [Rickettsia typhi
           str. Wilmington]
          Length = 218

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 13/224 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      + F         K  + + +LG+V+ +    + +       +     Y S F 
Sbjct: 5   LIKFYPKILFIIEGTLVTLKYSIIAVILGLVIGMLL-AICKVNKNCVLRLFANFYTSIF- 62

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P LV +++ Y   F  P +    F         FM+  I+ +  + A+++E++R+G
Sbjct: 63  -RGTPLLVQLSIIY---FAAPYIISIKF-------SVFMAGVISFALNSGAYVSEVIRAG 111

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  + +GQ EAA AL +      + ++LPQA+ +I P L ++ +NL+K S++   +G  D
Sbjct: 112 INTIDKGQFEAAEALAIPKFLIMKDIILPQAINNIFPSLVNELINLIKESAIISMLGEMD 171

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     +  +T      +LI    Y  L ++I+     +  K+
Sbjct: 172 LMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKM 215



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N ++      Y  +FR  P LV +  +
Sbjct: 15  IIEGTLVTLKYSIIAVILGLVIGMLLAICKVNKNCVLRLFANFYTSIFRGTPLLVQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFAAP 79


>gi|119383897|ref|YP_914953.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373664|gb|ABL69257.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 240

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 97/216 (44%), Gaps = 14/216 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + + S   G +L++    +    H +  + +   Y+  F       
Sbjct: 11  NWQLFASGLWMTLVVALLSIAAGFLLAI-PVAIMALSHRRWLRTIAGAYVEWFRNIPFIV 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ I   Y L F    L            PE +   IAL+ Y + + +E++R  ++AVP+
Sbjct: 70  VLYIFF-YGLPFMGLRL------------PEPVVGGIALAFYASTYFSEVIRGAVLAVPK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA A+G+++    R V+ PQ +R ++PP T+  ++++K +S+   +  A++   G 
Sbjct: 117 GQLEAARAVGMSYFMGMREVVAPQTLRLLLPPSTNTAISMIKETSVLSTITVAEITYQGL 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +   T    E+ L    +Y  ++   A  M+R+  
Sbjct: 177 VVQGATFAPFEVFLTTAALYWLITSAFAHGMHRVER 212



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 G   T  +A   +    ++   V    LS  + +  I   YVE FRNIP +VV+
Sbjct: 12  WQLFASGLWMTLVVALLSIAAGFLLAIPVAIMALSHRRWLRTIAGAYVEWFRNIPFIVVL 71

Query: 146 FFLYKSVL 153
           +  +  + 
Sbjct: 72  YIFFYGLP 79


>gi|330969355|gb|EGH69421.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 283

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 75  GFLQGAALTLFVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 134

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 135 IYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPTQIF 194

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 195 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 254

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 255 VLYWIMSIGLELLQSRLERHYG 276


>gi|84385569|ref|ZP_00988600.1| arginine ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84379549|gb|EAP96401.1| arginine ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 222

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + LS     + T+ ++   S ++G +LSL  T        +      L      L  
Sbjct: 1   MNQQYLSQMLEGLATSLQLTGASLLVGCILSLLMTV---TLILRIPAIHWLTRGIITLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + + +F+      P F    +AL+  TAA+   + R    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDWIRE-SFLWNWLSQPWF-CAMLALALNTAAYSTLLFRGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EA  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPAGQWEACRALGMDKVTTL-KVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKK 215


>gi|15601791|ref|NP_233422.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|121587149|ref|ZP_01676924.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121726619|ref|ZP_01679855.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|147672361|ref|YP_001215042.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|153817671|ref|ZP_01970338.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153821742|ref|ZP_01974409.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|227812604|ref|YP_002812614.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|229505827|ref|ZP_04395336.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229510318|ref|ZP_04399798.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229517550|ref|ZP_04406995.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229605360|ref|YP_002876064.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254850199|ref|ZP_05239549.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255746229|ref|ZP_05420176.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262158719|ref|ZP_06029833.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|298499807|ref|ZP_07009613.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
 gi|9658483|gb|AAF96934.1| amino acid ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548588|gb|EAX58640.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           2740-80]
 gi|121630925|gb|EAX63305.1| amino acid ABC transporter, permease protein [Vibrio cholerae V52]
 gi|126511827|gb|EAZ74421.1| amino acid ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126520738|gb|EAZ77961.1| amino acid ABC transporter, permease protein [Vibrio cholerae B33]
 gi|146314744|gb|ABQ19284.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227011746|gb|ACP07957.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           M66-2]
 gi|227015684|gb|ACP11893.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229345586|gb|EEO10559.1| amino acid ABC transporter permease protein [Vibrio cholerae RC9]
 gi|229352763|gb|EEO17703.1| amino acid ABC transporter permease protein [Vibrio cholerae B33]
 gi|229356178|gb|EEO21096.1| amino acid ABC transporter permease protein [Vibrio cholerae BX
           330286]
 gi|229371846|gb|ACQ62268.1| amino acid ABC transporter permease protein [Vibrio cholerae
           MJ-1236]
 gi|254845904|gb|EET24318.1| amino acid ABC transporter [Vibrio cholerae MO10]
 gi|255735983|gb|EET91381.1| amino acid ABC transporter permease protein [Vibrio cholera CIRS
           101]
 gi|262029599|gb|EEY48249.1| amino acid ABC transporter permease protein [Vibrio cholerae INDRE
           91/1]
 gi|297541788|gb|EFH77839.1| amino acid ABC transporter [Vibrio cholerae MAK 757]
          Length = 298

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYIST 226
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L    
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 227 FLIFGL--PTLVLIALKYQLHFDKPVLGQF--NFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              F +    + L+ L   L +    +        G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRYHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 9/162 (5%)

Query: 57  LSLGIGFLSERAGFEI--------DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           ++            L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYQWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL-SVLPIPDHSIVLPF 167
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  +   ++P+     +L +
Sbjct: 85  VLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRY 144

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
                +  +++          +      +G++ S +   + R
Sbjct: 145 HTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVR 186


>gi|17986397|ref|NP_539031.1| asparagine transport system permease protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|265991981|ref|ZP_06104538.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17981989|gb|AAL51295.1| asparagine transport system permease protein [Brucella melitensis
           bv. 1 str. 16M]
 gi|263003047|gb|EEZ15340.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 244

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 11/185 (5%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           H +      ++ +    I G P LV I L Y   +  P L       G  +SP   +  +
Sbjct: 70  HARHSPLNAVIGVVISFIRGTPILVQIFLFY---YGLPAL-------GLDLSP-IQAGIL 118

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A++  ++ FI EI+R GL  +  G +EAAIALG+  +     V+LPQ    I+PPL ++ 
Sbjct: 119 AIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNEL 178

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +K ++L   +   +++     + N + + +E +L    I  +++++++     L  +
Sbjct: 179 TTTVKGTALLSVITVVEVLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMR 238

Query: 392 IALKE 396
            A + 
Sbjct: 239 FAARR 243


>gi|322373066|ref|ZP_08047602.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321278108|gb|EFX55177.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 213

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T+     + V S  LGIVL+            K    L  LY+
Sbjct: 1   MSYVLEVLPALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQ-----IKFKPLNWLLTLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                 V     +  IA +   AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYYV-----------LPSVGIVFDRLPAAIIAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P+GQ EAA  L L+  +  R V+LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGILAIPKGQYEAAKMLKLSPFQTIRYVILPQVVKIVLPSIFNEIINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+    T  N+    +  + +   IYL L  ++ +   R+  K 
Sbjct: 163 GVGDLLLESRTAANRDA-TLAPMFVAGAIYLILVGVVTVASKRIEKKF 209



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T  + F  ++ +  +G ++        K + W+  +YV + R  P L+ + F
Sbjct: 10  ALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQIKFKPLNWLLTLYVWIMRGTPLLLQLIF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  + SV  + D          LN              A 
Sbjct: 70  VYYVLPSVGIVFDRLPAAIIAFTLNYAAYFAEIFRGGILAI 110


>gi|304398229|ref|ZP_07380103.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304354095|gb|EFM18468.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 238

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 93/224 (41%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTF 227
           +    + L +      T   I ++  +L + +      L         + +   +++ T+
Sbjct: 5   IQEYWKSLLWTDGYRFTGVAITLWLLILSVTVGGCLAILLAIARVSPNRFISFPVWLFTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + + Y   +   ++     +  +          +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLVFYSGMYTLEIVKGTELL-NAFFRSGLNCTLLAFTLNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VP G++EAA A G +  K  R ++LP A+R+ +P  +++ + +L +++LA      
Sbjct: 124 AIRSVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+ +   I + T Q      I   +YL +S ++         +
Sbjct: 184 DLLKIARDINSATYQPFTAFGIAAVLYLIISYVLISLFRLAERR 227


>gi|294670526|ref|ZP_06735406.1| hypothetical protein NEIELOOT_02248 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307805|gb|EFE49048.1| hypothetical protein NEIELOOT_02248 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 248

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 9/191 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-------IGGSTVSPEF 266
              + + LLY++ F   G P  V I + Y +     +  +  +       I         
Sbjct: 60  WLLRNVSLLYVTLF--RGTPLFVQIFIWYYVWSVALIHPEHGWLVNGEQAIAMRRDYGAI 117

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  +AL+    A+I EI R+G++++ +GQMEAA +LGLT+ +A R V+LPQA R ++PP
Sbjct: 118 TAGVLALTANATAYITEIFRAGILSIDKGQMEAARSLGLTYPQAMRFVILPQAFRRMLPP 177

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L ++++ LLK+SSL  ++  A+L  V  TI  +     E +     IYL ++I ++ F +
Sbjct: 178 LANEFITLLKDSSLLSSIAVAELTYVQRTISGRFSIYEEPLYAIALIYLLMTICLSWFFS 237

Query: 387 RLNAKIALKEK 397
            L  +   + +
Sbjct: 238 SLEKRYNPQRR 248


>gi|270264106|ref|ZP_06192373.1| transporter [Serratia odorifera 4Rx13]
 gi|270041755|gb|EFA14852.1| transporter [Serratia odorifera 4Rx13]
          Length = 246

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 112/227 (49%), Gaps = 11/227 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                ++P   +   A     S + G+  ++  T L        G A  LL         
Sbjct: 12  YLLWGTWPDGPLGGAALTLAISLMAGVASAVLGTLLGVALAMSRGVAAGLLAAVLGFFRA 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P    I L +  +F  P+L   +        PE  ++  AL+   +A++A  V++G++A
Sbjct: 72  IPV---IMLIFWTYFLLPILFGVDI-------PEITTVVCALALIASAYLAHAVKAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQ +A ++LGLT  +  R+++LPQA+R ++P   +Q+++L+K++SLA  VG ++L  
Sbjct: 122 IGPGQWQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVSELTF 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   + N++    +E+ L    +Y    + + L  N +N +++ + +
Sbjct: 182 LATQVNNRSMVYPMEVFLFVALVYFVFCLALDLLANAVNRRLSPQAR 228


>gi|254286779|ref|ZP_04961733.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|297579380|ref|ZP_06941308.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|150423206|gb|EDN15153.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|297536974|gb|EFH75807.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 260

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------PVLGQFNF 256
             R     +    + +P L +   + FG   L+   L +   F         P      +
Sbjct: 60  WARAIATLYTTIIRGIPDLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWGAY 119

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LL
Sbjct: 120 LPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILL 179

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  IP   + +L LLK ++L   +G  D+V +       T       +    I+L 
Sbjct: 180 PQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLF 239

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + +    +  L  K ++  +
Sbjct: 240 FTSVSTGLLKLLERKFSIHTR 260



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A ++G L    +++  +    I  +Y  + R IP LV+
Sbjct: 21  YEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVL 80

Query: 145 IFFLYKSVLS--------VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++                  +  +            L          A +    F+ 
Sbjct: 81  MMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWGAYLPDYVDISPFVAGVLTIGFIF 140

Query: 197 GIVLS 201
           G  ++
Sbjct: 141 GAYMA 145


>gi|327441796|dbj|BAK18161.1| ABC-type amino acid transport system, permease component
           [Solibacillus silvestris StLB046]
          Length = 227

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 11/234 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F               +     +   SF+L +++ L     +   + K      +L +
Sbjct: 1   MNFDFGYMIEIFPRIIEYLPIVLYMGTLSFILAVIIGLL---FAVIINFKVPVIYQILIV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G+PTL+ I + Y   F  P L         +      ++  ALS   AA+++E+
Sbjct: 58  IISYFRGVPTLIQIFIFY---FGIPQL-----FPSFSSLDAITAVIFALSVKNAAYLSEV 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RS  +AV +GQ EA  A+ +T  +  R V+LPQ +R  IP   + Y+ ++K +SLA  +
Sbjct: 110 FRSAFLAVDKGQFEACDAMNMTKWQGLRTVILPQVLRVAIPASGNYYIMMIKETSLAFTI 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D+++        T + +E  L    IY ++++++A   ++L   +    +K
Sbjct: 170 GVVDMLARAKLESAVTYKFLEAYLTVGLIYWTITVILAFLQSKLENYVERPYQK 223


>gi|50914070|ref|YP_060042.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
 gi|50903144|gb|AAT86859.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS10394]
          Length = 216

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+
Sbjct: 52  YLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSLA 
Sbjct: 104 EVFRSSIEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 164 MITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|187923549|ref|YP_001895191.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714743|gb|ACD15967.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 229

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +A+   Y  T LI  +P LVL+ L +                       F++
Sbjct: 39  KLSFNRPLRAIATGY--TTLIRSVPDLVLMLLLFYSIQIAVNNLTDALNLPQFDIDPFVA 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + 
Sbjct: 97  GVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGARVFTRILFPQMMRFALPGIG 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T      IL+   IYL+++    L +  L
Sbjct: 157 NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTASNLVLIWL 216

Query: 389 NAKIALKEKK 398
             + ++  + 
Sbjct: 217 EKRYSIGVRH 226


>gi|251788053|ref|YP_003002774.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247536674|gb|ACT05295.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 311

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 109/290 (37%), Gaps = 10/290 (3%)

Query: 119 LSANKLVAWICRVYVEVFRNIPP---------LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            S+   V           R +P          L  +F       SV         +    
Sbjct: 2   TSSIPFVRHPADAPSPALRVVPARYPLRIAGTLFSLFIFAGVAESVALNGRWEWPVFASY 61

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F N   +     T+       +FS + G  L+L     S          + L      ++
Sbjct: 62  FFNPVIVEGLGRTLLLTLLGTLFSIIAGTGLALAQLSSSALLSTLAWLYIWLFRSLPLIL 121

Query: 230 FGLPTLVLIALKYQLHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             +       L   L    P    +F           F    + L+   +A+ AEI+R G
Sbjct: 122 VLIILYNFSYLYDALALGIPFTSIEFFRYPTIDALGPFAVAVLGLTLVQSAYTAEIIRGG 181

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V  GQ EAA ALGL   + T  ++LPQA+RSI+P   ++ ++L K +S+   +   +
Sbjct: 182 ILGVDAGQFEAAAALGLPGYRRTWRIILPQALRSILPTGFNEIISLAKGTSVVYVLALPE 241

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L      I N+T Q I ++++    YL ++ ++++    +   +A    +
Sbjct: 242 LFYTVQVIYNRTQQVIPLLMVATVWYLVITSVLSVLQYFVERYVARGAVR 291


>gi|47092916|ref|ZP_00230698.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|47018742|gb|EAL09493.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
          Length = 221

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG V+++           K      +L I  +++ G P L
Sbjct: 20  LDGAKTTLLVFAVTLVCSIPLGAVVAVGNIS-------KIAPLKFILNIYIWIMRGTPLL 72

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     +++IA     AA+ AEI R G +++  G
Sbjct: 73  LQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENG 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  + ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 122 QYESAKVLGLTYGQTLQKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 181

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 182 AMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKRFS 218



 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 15  ILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 75  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 103


>gi|307312879|ref|ZP_07592508.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306899393|gb|EFN30026.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 228

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 96/224 (42%), Gaps = 14/224 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L      +     +       GI L +F   +S        + L  L
Sbjct: 1   MDYTFQFGPLLNYLPQIVSGLWLTIGLSFVGIFGGIALGIFCAVMS-TSSSPIPRLLVRL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++   ++   P LV I + +           F             S++IAL      ++A
Sbjct: 60  HVE--VVRNTPLLVQIFVIF-----------FGLPNIGIRLSPLTSVFIALVLNNGGYVA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ A  R Q+EAA +LGL++ +  R V+LP A+  +  P+ SQ + L+ ++SL  
Sbjct: 107 EIVRGGIEATHRSQVEAAESLGLSYFQTLRYVILPPALEKVFTPVVSQCVLLMLSTSLVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           A+G  DL        ++T + +EI L+   +Y+ L+ +    +N
Sbjct: 167 AIGVEDLTGAAMIASSETFRTMEIYLVVAMVYVVLNFVFRAVLN 210



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 42/95 (44%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    +Y   I+ G   T  L+F G+     +G        S++ +   + R++VEV RN
Sbjct: 7   FGPLLNYLPQIVSGLWLTIGLSFVGIFGGIALGIFCAVMSTSSSPIPRLLVRLHVEVVRN 66

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            P LV IF ++  + ++         +   + LNN
Sbjct: 67  TPLLVQIFVIFFGLPNIGIRLSPLTSVFIALVLNN 101


>gi|293395144|ref|ZP_06639430.1| histidine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291422321|gb|EFE95564.1| histidine ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 235

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 93/224 (41%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTF 227
           +    + L +      T   + ++  +  +V+              + + L   +++ T+
Sbjct: 5   LQQYWQSLLWSDGYRFTGVAVTLWLLIASVVMGGLLAIPMAVARVSSLRWLRFPVWLYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + + Y   +   ++     +  +          +AL+  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLVFYSGMYSLEMVRGTELL-NAFFRSGLNCTILALTLNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VP G++EAA A G +  K  R ++LP A+RS +P  +++ + +L +++LA      
Sbjct: 124 AIRSVPHGEIEAANAYGFSRFKMYRCIILPSALRSALPAYSNEVILMLHSTALAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+ V   I   T Q      I   +YL++S  +         +
Sbjct: 184 DLLKVARDINAATYQPFYAFGIAAVLYLAISYALISLFRLAEKR 227



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 29/68 (42%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL  + ++   ++   +   R+S+ + + +   +Y  VFR  P  V +   Y
Sbjct: 20  FTGVAVTLWLLIASVVMGGLLAIPMAVARVSSLRWLRFPVWLYTYVFRGTPLYVQLLVFY 79

Query: 150 KSVLSVLP 157
             + S+  
Sbjct: 80  SGMYSLEM 87


>gi|307299193|ref|ZP_07578994.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914989|gb|EFN45375.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 215

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 14/212 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M    +I   +  LG+VL+L      + +  K  KAL   Y    ++  +P LV++ L +
Sbjct: 8   MWVTLQITFLTLGLGLVLAL-PISFGQVYGNKWIKALIAGYEK--ILRSIPELVILFLIF 64

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                        F         F ++ I L   ++A+ ++I R  + +V   QM AA +
Sbjct: 65  Y-----------GFPKIGIRFSPFAAVIIGLGFRSSAYQSQIFRGAINSVSSAQMRAARS 113

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T+ K    ++LPQA+R  +PP T+++  +LK+SSLA A+G  +L+  GG II    +
Sbjct: 114 LGMTNLKGFINIVLPQAIRIALPPWTNEFTIVLKDSSLAYALGVTELLRQGGYIIATKYE 173

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + I L    +Y  ++I I   +  +  ++A+
Sbjct: 174 PMLIYLTVAVMYFIVTIAINKTLGSVEKRLAI 205



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 36/82 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  + F  +    ++   +  G++  NK +  +   Y ++ R+IP LV++F 
Sbjct: 3   ALLSGMWVTLQITFLTLGLGLVLALPISFGQVYGNKWIKALIAGYEKILRSIPELVILFL 62

Query: 148 LYKSVLSVLPIPDHSIVLPFGM 169
           ++     +         +  G+
Sbjct: 63  IFYGFPKIGIRFSPFAAVIIGL 84


>gi|283852826|ref|ZP_06370089.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283571818|gb|EFC19815.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 253

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 18/257 (7%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           + FR     +++  L   +  VL    +              ++   +TM  +    V  
Sbjct: 4   KAFRLTVRFLLLAALAGLLWLVLSHLRYHWDWEAVFAYRRIFVAGLGMTMVISIGAIVLG 63

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             LG+   L     +          +  LY+  F   G P LV I + Y           
Sbjct: 64  LALGLASGL-----ASVSGSVVLSEMAALYVGAF--RGTPLLVQILIFY----------- 105

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F       V   ++     L+C++ A+I+E+VR+G+ +V RGQ E A++ GLTHR+A   
Sbjct: 106 FCIGVLVHVDSPYVIGTATLACFSGAYISEMVRAGVESVDRGQWETAVSSGLTHRQALFY 165

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+ PQA R I+PP+T Q+++ +K+SSL   +   +L      +   T +  E  L    +
Sbjct: 166 VIFPQAARRIVPPVTGQFVSCIKDSSLLSVISVRELTKAAEVVNATTYKTFEAYLPLALL 225

Query: 374 YLSLSIMIALFMNRLNA 390
           YL L+  ++    RL  
Sbjct: 226 YLLLTWPLSHLTGRLER 242



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + +  +Y    + G   T  ++   ++    +G   G   +S + +++ +  +YV  FR
Sbjct: 34  DWEAVFAYRRIFVAGLGMTMVISIGAIVLGLALGLASGLASVSGSVVLSEMAALYVGAFR 93

Query: 138 NIPPLVVIFFLYKSV 152
             P LV I   Y  +
Sbjct: 94  GTPLLVQILIFYFCI 108


>gi|257877476|ref|ZP_05657129.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257811642|gb|EEV40462.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 226

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 17/234 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             +    + L    L +    +     I V SF+ G VL +  T L         +    
Sbjct: 1   MYIPTLDLPLMWESLPYLLSGLSYTVGIAVVSFLGGNVLGIMLTFLG-MLENPFIRGFVR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+S   + G+P LVL+ L Y               G         +  I  +  ++AFI
Sbjct: 60  GYLSF--LRGVPALVLLFLLY--------------FGLPYQLSALSAAIICFTLTSSAFI 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI R  +  V RGQ +AA ALGL+  K  RL++LPQA R  +P L++  ++LLK +SLA
Sbjct: 104 GEIYRGSIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   D+      +  +T   + + ++   IY  L I+I     RL    + +
Sbjct: 164 AMITIPDIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLEQHFSKR 217


>gi|238751270|ref|ZP_04612764.1| Histidine transport system permease protein hisM [Yersinia rohdei
           ATCC 43380]
 gi|238710544|gb|EEQ02768.1| Histidine transport system permease protein hisM [Yersinia rohdei
           ATCC 43380]
          Length = 214

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 92/207 (44%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S V+G +L++    ++R    +  +    ++I T++  G P  V + + Y  
Sbjct: 1   MTLWLLITSVVMGGLLAIPL-AVARVAERRWIRL--PVWIFTYIFRGTPLYVQLLVFYSG 57

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +   ++   + +  +          +AL+  T A+  EI    + +VP G++EAA A G
Sbjct: 58  MYSLEIVRGNDLL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYG 116

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  K  R ++LP A+R  +P  +++ + +L +++LA      D++ +   I   T Q  
Sbjct: 117 FSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQPF 176

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
               I   +YL +S  +         +
Sbjct: 177 YAFGIAAVLYLIISFTLISLFRHAERR 203


>gi|268592305|ref|ZP_06126526.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
 gi|291312086|gb|EFE52539.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
          Length = 250

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 4/246 (1%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFAT 205
           +++  L+      H +   +  +     L    +++ T     V  F++       +   
Sbjct: 1   MFEKFLNGDFWSAHFLAPQYLEWFGYGFLITIWISICTIVAATVLGFIVASAKDSQITLV 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R +   +    +  PLL    F  F    ++  A    L  + P       I     S E
Sbjct: 61  RWAVSIYISIFRNTPLLVQLFFWYFASGEILPSAAMEWL--NTPHEVHLLGITVGWPSFE 118

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++ +I L+ YT  FIAE +R+G+  V +GQ  AA ALGLT  +A +LV+LPQA++  +P
Sbjct: 119 FLAGFIGLTLYTVPFIAEEIRAGIRGVRQGQKYAAFALGLTSWQAMKLVVLPQAVKIAMP 178

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  QY+N++KNSSL +A+G A+L  V   + +QT Q      +   +Y+++  ++  + 
Sbjct: 179 PLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQTLQTFAAFGVATVLYIAIIAVMEGWG 238

Query: 386 NRLNAK 391
                +
Sbjct: 239 QWRQQR 244



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 3/165 (1%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
                 +     Y      GF+ T W++   ++ AT++G +V + + S   LV W   +Y
Sbjct: 8   GDFWSAHFLAPQYLEWFGYGFLITIWISICTIVAATVLGFIVASAKDSQITLVRWAVSIY 67

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           + +FRN P LV +FF Y +   +LP      +           L                
Sbjct: 68  ISIFRNTPLLVQLFFWYFASGEILPSAAMEWLNTP---HEVHLLGITVGWPSFEFLAGFI 124

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
              L  V  +     +     + G+      +       +  +VL
Sbjct: 125 GLTLYTVPFIAEEIRAGIRGVRQGQKYAAFALGLTSWQAMKLVVL 169


>gi|125718375|ref|YP_001035508.1| ABC transporter membrane-spanning permease, arginine/histidine
           transport, putative [Streptococcus sanguinis SK36]
 gi|125498292|gb|ABN44958.1| ABC transporter membrane-spanning permease, arginine/histidine
           transport, putative [Streptococcus sanguinis SK36]
 gi|325690799|gb|EGD32800.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
 gi|325694843|gb|EGD36748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
 gi|325696132|gb|EGD38023.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 226

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 16/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLL 222
           M  +               + F+F+  + I     A  L   F        K  + L  +
Sbjct: 1   MSFSISSWQAYFADFGKFFQGFLFTLAISIGALTLALLLGIFFGAISTGKHKVLRGLARV 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++        P LV   + +   +  P++  +     + +   + +  + +  Y  A+IA
Sbjct: 61  FVEF--YQNTPLLVQFVIVF---YGLPLVSNY-----TIMPSIYWTAVLCVGLYHGAYIA 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++RSG+ ++PRGQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S   
Sbjct: 111 EVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVA 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +   DL+ V  +        I        +Y  L   IA +  ++ 
Sbjct: 171 IISGMDLMFVTKSWSALNSNYIPAFAGAALLYFLLCFPIASWGRKVE 217



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +  A ++G   GA     +K++  + RV+VE ++N P LV    +
Sbjct: 18  FFQGFLFTLAISIGALTLALLLGIFFGAISTGKHKVLRGLARVFVEFYQNTPLLVQFVIV 77

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  V        +  
Sbjct: 78  FYGLPLVSNYTIMPSIYW 95


>gi|325964968|ref|YP_004242874.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323471055|gb|ADX74740.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 262

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 22/217 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V   VLG+V+++     S+              I T L  GLP ++ I L  Q   
Sbjct: 37  VAATVIGVVLGMVVAVMGISPSKWLRIPA-------RIYTDLFRGLPAILTILLIGQ--- 86

Query: 247 DKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                  F  +  S   P  +    IALS   +A+I EI R+G+ +V +GQ EA  ALG+
Sbjct: 87  ------GFARLSQSIFGPSPYPLGIIALSLIASAYIGEIFRAGIQSVDKGQGEACRALGM 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361
           T+ K+  LV++PQ +R ++P L +Q++ ++K+SSL   +G      +L  VG      +G
Sbjct: 141 TYGKSMALVVIPQGIRRVLPALVNQFIAIVKDSSLVYFLGLLVSERELFRVGQDAAVLSG 200

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  +++    YL +++ +   +N  +++    +++
Sbjct: 201 N-LSPLVMAGVFYLIITVPLTHLVNYFDSRFRAGKRR 236



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 38/82 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + VG +NT  ++ +  +   ++G +V    +S +K +    R+Y ++FR +P ++ I  +
Sbjct: 25  LAVGLLNTLIISVAATVIGVVLGMVVAVMGISPSKWLRIPARIYTDLFRGLPAILTILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            +    +          P G+ 
Sbjct: 85  GQGFARLSQSIFGPSPYPLGII 106


>gi|295675492|ref|YP_003604016.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295435335|gb|ADG14505.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 238

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 101/228 (44%), Gaps = 14/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +        +           ++ V +FVL +VL L  T L+        + +   Y+
Sbjct: 1   MSYQWLTLWGYVPEFLSASWLTLQVTVLAFVLALVLGLL-TALAGASPLAVLRWIARGYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I   P L+ I + +           F           + +  IAL     A+++E+
Sbjct: 60  E--IIRNTPVLLQIFIVF-----------FGLPSAGVSLDAYWAGVIALGLNVGAYLSEV 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ +VPRGQ+EAA  LGL   +    V+LPQA R++ P + +  + LL  +SL  A+
Sbjct: 107 FRAGIQSVPRGQIEAAGILGLERAQIFVEVVLPQATRAVYPAIVNYLIQLLLGTSLLSAI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +L      I ++T   ++   + +  YL LS +++    +L A++
Sbjct: 167 ALPELTGTATVINSRTLLYLQTFSVTLVAYLVLSNVLSWLAAQLGARL 214



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 34/87 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + +   Y    L     T  +     + A ++G L      S   ++ WI R YVE+ 
Sbjct: 3   YQWLTLWGYVPEFLSASWLTLQVTVLAFVLALVLGLLTALAGASPLAVLRWIARGYVEII 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           RN P L+ IF ++  + S     D   
Sbjct: 63  RNTPVLLQIFIVFFGLPSAGVSLDAYW 89


>gi|239978682|ref|ZP_04701206.1| putative ABC transporter permease protein [Streptomyces albus
           J1074]
          Length = 173

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 86/168 (51%), Gaps = 7/168 (4%)

Query: 233 PTLVLIALKYQL-------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           P +V +   + L        F  P    F       +     +  + L+ + AA+ AEIV
Sbjct: 1   PLIVQLLFWFNLAYLYDEIQFGIPFGPGFVSFDTMGLVGAMGAAVLGLALHQAAYAAEIV 60

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+++V  GQ++AA +LG+   +  R ++LPQAMRSI+P   ++ ++L K +S+   + 
Sbjct: 61  RAGVLSVDAGQLQAAASLGIPRLRQIRRIVLPQAMRSILPNAANEIISLFKGTSIVSVMA 120

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L      I  + G+ + ++++    Y+ L+ ++++  + +  + A
Sbjct: 121 IGELFYQVQVIYGRNGRVVPLLMVATLWYVLLTTVLSVVQHHVEKRFA 168


>gi|238763902|ref|ZP_04624859.1| Histidine transport system permease protein hisM [Yersinia
           kristensenii ATCC 33638]
 gi|238697870|gb|EEP90630.1| Histidine transport system permease protein hisM [Yersinia
           kristensenii ATCC 33638]
          Length = 216

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 4/209 (1%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M     + + S V+G +L++    ++R    +  +    ++I T++  G P  V + + Y
Sbjct: 1   MAVTLWLLISSVVMGGLLAIPL-AVARVAERRWIRLP--VWIFTYIFRGTPLYVQLLIFY 57

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +   ++   + +  +          +AL+  T A+  EI    + +VP G++EAA A
Sbjct: 58  SGMYSLEIVRGNDLL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 116

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G +  K  R ++LP A+R  +P  +++ + +L +++LA      D++ +   I   T Q
Sbjct: 117 YGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 176

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I   +YL +S  +     +   +
Sbjct: 177 PFYAFGIAAVLYLIISFTLISLFRQAEKR 205


>gi|229120292|ref|ZP_04249542.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 95/8201]
 gi|228663102|gb|EEL18692.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus 95/8201]
          Length = 214

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 19/215 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F            +++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIIIAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAVA+   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVAISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           I  Q     I   ++   +Y  ++  +++   RL 
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLE 212



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|330945316|gb|EGH46938.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 252

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 14/254 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y     V+       +L  G F      +     +     I     V  + L +    L
Sbjct: 10  VYGITFLVIYPVVAFYLLHGGAFGLTNVPTSQWGGLMLTLVIATVGIVGALPLGILL-AL 68

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R  +    + + + +I  +    L T VL      L    P    F+         + +
Sbjct: 69  GRRSNMPAVRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFMPEGMNFD---------KLL 118

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+LPQA++ +IP +
Sbjct: 119 RALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVILPQALKMVIPGI 178

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALF 384
            + ++ L K++SL + +G  DL++            G A E  +    ++      ++ +
Sbjct: 179 VNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAALVFWIFCFGMSRY 238

Query: 385 MNRLNAKIALKEKK 398
              L  K+    K+
Sbjct: 239 SMHLERKLDTGHKR 252



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G++ A  +G L+  GR S    V  +C  ++E +R +P + V+F     
Sbjct: 44  GLMLTLVIATVGIVGALPLGILLALGRRSNMPAVRVVCVTFIEFWRGVPLITVLFMSSVM 103

Query: 152 VLSVLPI 158
           +   +P 
Sbjct: 104 LPLFMPE 110


>gi|261253294|ref|ZP_05945867.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           orientalis CIP 102891]
 gi|260936685|gb|EEX92674.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           orientalis CIP 102891]
          Length = 246

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ + S ++ ++L      L++    +  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  VTIEVALLSLLVAMILG-MLGALAKMAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P     +++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINEWLNEWFASGNPDHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV RG++EAA A G++   A R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDRGELEAAKAYGMSSFLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V +       T       +    I+L  + +   F+  +  K ++  +
Sbjct: 194 GLEDMVRMSALAAGTTKMPFTFYMAVALIFLFFTSVSTGFLKMVERKFSIHAR 246



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G V T  +A   ++ A I+G L    +++  +    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGAVVTIEVALLSLLVAMILGMLGALAKMAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINEWLNEWFASGNPDHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|153009567|ref|YP_001370782.1| polar amino acid ABC transporter inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561455|gb|ABS14953.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 277

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 5/218 (2%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 +    K+   S V+G +LSL  T  +R  + +  + +   Y+  F   G P L 
Sbjct: 61  PRYWSGLLITLKLVAVSIVIGALLSLPITA-ARMSNNRWLRGIAFGYVYFF--RGTPLLA 117

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              L Y   F        +          +    +A S  TAA+ AEI+R  + +V  GQ
Sbjct: 118 QTFLIYY-GFGTFRPFLESIGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIQSVALGQ 176

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E A ALG++ R     V+LPQA+   + P  ++ + ++K S++   +   DL+      
Sbjct: 177 WEGAAALGISKRVTFWKVILPQALIVALRPYGNEIILMIKGSAIVAIITVLDLMGETRRA 236

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            ++T    +  L    IYL +   +    + L  ++  
Sbjct: 237 YSRTFD-FQTYLWAAVIYLLIVECLRHVWDFLERRLTR 273



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 49/146 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y      G + T  L    ++   ++   + A R+S N+ +  I   YV  FR  P L
Sbjct: 57  ETYGPRYWSGLLITLKLVAVSIVIGALLSLPITAARMSNNRWLRGIAFGYVYFFRGTPLL 116

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
              F +Y    +  P  +   +  F     N  +   +L         +   +  + L  
Sbjct: 117 AQTFLIYYGFGTFRPFLESIGLWVFFRDAWNCAILAFSLNTAAYQAEILRGAIQSVALGQ 176

Query: 203 FATRLSRHFHEKTGKALPLLYISTFL 228
           +    +    ++      +L  +  +
Sbjct: 177 WEGAAALGISKRVTFWKVILPQALIV 202


>gi|94988394|ref|YP_596495.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992276|ref|YP_600375.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS2096]
 gi|94541902|gb|ABF31951.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94545784|gb|ABF35831.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS2096]
          Length = 216

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+
Sbjct: 52  YLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSLA 
Sbjct: 104 EVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 164 MITVPDIFQNAKIIGGREWDYMSMYILVAFIYWIIAFLLERYQEFLENKLAL 215


>gi|323498050|ref|ZP_08103057.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326]
 gi|323316898|gb|EGA69902.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326]
          Length = 246

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    +  +A+  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQILLNNSLYSINETLNE 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G+    + R +LLPQ +R  +P   + +L LLK ++L   +G  D+V V       T  
Sbjct: 152 YGMGPVMSFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSALAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  K ++  +
Sbjct: 212 PFTFYMAVALIFLFFTSVSTGLLKVVERKFSIHAR 246



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A I+G L    +++  +    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGALVTIEVALLSLLLAVILGMLGALAKMAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|257790427|ref|YP_003181033.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|317490080|ref|ZP_07948569.1| binding-protein-dependent transport system inner membrane component
           [Eggerthella sp. 1_3_56FAA]
 gi|325833821|ref|ZP_08166171.1| putative arginine ABC transporter, permease protein ArtQ
           [Eggerthella sp. HGA1]
 gi|257474324|gb|ACV54644.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|316910785|gb|EFV32405.1| binding-protein-dependent transport system inner membrane component
           [Eggerthella sp. 1_3_56FAA]
 gi|325485179|gb|EGC87651.1| putative arginine ABC transporter, permease protein ArtQ
           [Eggerthella sp. HGA1]
          Length = 217

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 97/222 (43%), Gaps = 15/222 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    LS    T+       + S  LG++++            +  +  P+  ++ F I 
Sbjct: 6   MMELLLSGLAFTLQIFVTTLIGSLPLGVLVAF----------GRMSRFKPVALVTRFYIS 55

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +    L+     L F    L             ++ +  I      AA+  EI R G+ 
Sbjct: 56  VMRGTPLMLQLMALMFGPYYLFGLQMGNDW----KYWACSIGFIINYAAYFGEIYRGGIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++PRGQ EAA  LG +  +    ++LPQ ++ I+P ++++ + L+K++SLA  +G  ++ 
Sbjct: 112 SIPRGQYEAAEVLGYSRFQTFMKIVLPQVVKRILPAMSNEIITLVKDTSLAFVLGIMEMF 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           S    I   +  ++   +I   IY   + ++ + + R+  ++
Sbjct: 172 SQAKAIAA-SQVSMLPYVIAGVIYWVFNFIVEIILTRVEKRL 212



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 31/63 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +  + +I +  +G LV  GR+S  K VA + R Y+ V R  P ++ +  L
Sbjct: 10  LLSGLAFTLQIFVTTLIGSLPLGVLVAFGRMSRFKPVALVTRFYISVMRGTPLMLQLMAL 69

Query: 149 YKS 151
              
Sbjct: 70  MFG 72


>gi|322391022|ref|ZP_08064526.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142252|gb|EFX37726.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 266

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 100/253 (39%), Gaps = 9/253 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++   + +             L   +      +    +T+        F  V  ++ +L 
Sbjct: 6   LLAANWYADFLKHVPDSKLFSLRAVLDAFPAVIGKLPVTILLALGGAFFGIVFAMIFALV 65

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGST 261
                R  +       P+  +    + G P LV + L Y       K +   +       
Sbjct: 66  KINRVRILY-------PIQAVFVSFLRGTPLLVQLMLTYYGIPLILKAINQSYGTAFNIN 118

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
             P  +   +AL+   AA+ +E +R+ +++V  G++EAA +LG+T+R+  R +++P A  
Sbjct: 119 AIPAELFAIVALAFNEAAYASETIRAAILSVDPGEIEAARSLGMTNRQVYRRIIIPNAAV 178

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              P L +  + L K +SLA +    ++ +    +     +  E  +    +Y  ++I+I
Sbjct: 179 VATPTLINSLIGLTKGTSLAFSASVVEIFAQARIVGGSDLKYFERFITVSIVYWIVNILI 238

Query: 382 ALFMNRLNAKIAL 394
            +    +  ++ +
Sbjct: 239 EILGRHIERRLDI 251


>gi|295693564|ref|YP_003602174.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|295031670|emb|CBL51149.1| Amino acid ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
          Length = 215

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 15/209 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               IF ++ +L   L +    L      K  + L   Y+  +++ G P L+ +   +  
Sbjct: 19  MTLSIFFWTLILATPLGILV-SLGEKSKFKPLRWLVNFYV--WIMRGTPLLLQLIFVF-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P++          V P + +   A     AA+ AEI R G  ++  GQ EAA  L 
Sbjct: 74  -YGLPIIH--------IVFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLR 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +    +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G   + +    +
Sbjct: 125 LNRWQTMTKIIIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARD-VTL 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +++   IYL L  + A  + +L    +
Sbjct: 184 VPLVLVGVIYLLLIGICAFVLKKLENHFS 212



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  + F  +I AT +G LV  G  S  K + W+   YV + R  P L+ 
Sbjct: 9   ILPALLSGAGMTLSIFFWTLILATPLGILVSLGEKSKFKPLRWLVNFYVWIMRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F++  +  +  +        F   LN 
Sbjct: 69  LIFVFYGLPIIHIVFPRYQAALFAFVLNY 97


>gi|190891792|ref|YP_001978334.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190697071|gb|ACE91156.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 241

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 8/229 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+   +T+  +   F+   ++G V++     LSRH   +      L    T ++ 
Sbjct: 18  WGWLLLTAAAMTIGVSVCGFLTGTLIGTVITFMQ--LSRHLPIRW-----LADCYTTVLR 70

Query: 231 GLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           G+P L++I L Y         LG      G    P F++  +AL   +AA+ AE+ R   
Sbjct: 71  GVPDLLVIYLFYFGGSAFLGSLGGLFGYHGFIGMPAFLTGTLALGVVSAAYQAEVFRGAY 130

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V RG++EAA A+G+      R ++ P  +R  IP L + +  +LK S+L    G  +L
Sbjct: 131 RSVARGELEAASAVGMRPWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALISVTGLVEL 190

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +         T +  E  L  + +YL ++ + ++   R+ A+     ++
Sbjct: 191 LRQSQIAAGSTRRPFEFYLTAVVLYLVITWLSSILFRRMEARTIQGTRR 239



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L     T  ++  G +  T+IGT++   +LS +  + W+   Y  V R +P L+V
Sbjct: 18  WGWLLLTAAAMTIGVSVCGFLTGTLIGTVITFMQLSRHLPIRWLADCYTTVLRGVPDLLV 77

Query: 145 IFFLYKSV 152
           I+  Y   
Sbjct: 78  IYLFYFGG 85


>gi|126642342|ref|YP_001085326.1| amino acid ABC transporter permease [Acinetobacter baumannii ATCC
           17978]
          Length = 164

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 1/162 (0%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           ++ L Y L      + +   +    ++P F++  I L+    A+  E  R    +VPRGQ
Sbjct: 1   MLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPRGQ 59

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA+A G+T  +    VL PQ MR  +P + + +  L+K ++L   +G  D+V +    
Sbjct: 60  IEAAMAYGMTPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQDA 119

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              T Q     ++   IYL+++ +  L +  L    +   +K
Sbjct: 120 GRSTMQLFFFSIVAAAIYLAITTVSNLILMWLERHYSAGVRK 161


>gi|69248235|ref|ZP_00604685.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|257880069|ref|ZP_05659722.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257891160|ref|ZP_05670813.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257893974|ref|ZP_05673627.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|258614597|ref|ZP_05712367.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           DO]
 gi|260560318|ref|ZP_05832494.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261208255|ref|ZP_05922928.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289565943|ref|ZP_06446382.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|293553343|ref|ZP_06673979.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           E1039]
 gi|293563074|ref|ZP_06677540.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1162]
 gi|293567501|ref|ZP_06678846.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1071]
 gi|294616566|ref|ZP_06696343.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1636]
 gi|294618840|ref|ZP_06698361.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1679]
 gi|68194486|gb|EAN08984.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|257814297|gb|EEV43055.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257827520|gb|EEV54146.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257830353|gb|EEV56960.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260073663|gb|EEW61989.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260077512|gb|EEW65230.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289162227|gb|EFD10088.1| amino acid ABC transporter [Enterococcus faecium D344SRF]
 gi|291589744|gb|EFF21547.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1071]
 gi|291590576|gb|EFF22308.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1636]
 gi|291594915|gb|EFF26271.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1679]
 gi|291602567|gb|EFF32783.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           E1039]
 gi|291604988|gb|EFF34456.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Enterococcus faecium E1162]
          Length = 213

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +  + L     T+       + S  LGIVL+L         H K  +   LL  
Sbjct: 1   MEYLIEVMPQLLVGALTTLKLFLFTLIGSLPLGIVLALGL-----SLHFKPLRY--LLQT 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   +                   V   F +  IA     AA+ AEI
Sbjct: 54  YVWVMRGTPLLLQLIFIFY-----------GLPTIGIVFDRFEAALIAFILNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGIQSIPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYIL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++  G   + +    +  +L    IYL+L+ ++ + M ++  K+    
Sbjct: 163 GLGDVMRAGKIAMERDA-TLLPLLGVAIIYLTLTGILTIVMKQVEGKLNYYR 213



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG + T  L    +I +  +G ++  G     K + ++ + YV V R  P L+ + F+
Sbjct: 11  LLVGALTTLKLFLFTLIGSLPLGIVLALGLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + ++  + D          LN              + 
Sbjct: 71  FYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSI 110


>gi|310640486|ref|YP_003945244.1| amino acid abc transporter, permease protein [Paenibacillus
           polymyxa SC2]
 gi|309245436|gb|ADO55003.1| Amino acid ABC transporter, permease protein [Paenibacillus
           polymyxa SC2]
          Length = 219

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 106/231 (45%), Gaps = 14/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + + + +    L    +T+       + S  LG +++L A            +  P+ 
Sbjct: 1   MSMEYILRIMKPMLEGAQMTIILFFITLILSIPLGFIVTLLAKS----------RFKPIA 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++    I+ +    L+       F  P+L     IG   V     +  +A     AA+ A
Sbjct: 51  WLMHTYIYVIRGTPLLLQLLFFCFGLPML---PVIGEYLVLDRTTAAVLAFVLNYAAYFA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R G++++ +GQ EA+  LGL+  +    V++PQ +R  +P +T++   L+K+++L  
Sbjct: 108 EIFRGGMLSIDKGQYEASQVLGLSKSQTLIRVIVPQMVRIALPAVTNEATTLVKDTALLY 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AV   +L+    T +N+   +I   ++   IYL +++++ +F   L  +  
Sbjct: 168 AVAVPELLHFANTAVNRDF-SIVPYVVAAVIYLLMALVLTIFFRALEKRFK 217


>gi|307709001|ref|ZP_07645461.1| L-cystine transport system permease protein tcyB [Streptococcus
           mitis SK564]
 gi|307620337|gb|EFN99453.1| L-cystine transport system permease protein tcyB [Streptococcus
           mitis SK564]
          Length = 266

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 99/231 (42%), Gaps = 5/231 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +     G+      + T   + +   + G+VL+L    + +    K    L   ++S 
Sbjct: 25  FSLRSVFDGIPRIVQQLPTTIMLTIGGALFGLVLALL-FAIVKINRVKILYPLQAFFVSF 83

Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             + G P LV + L Y       K +  Q+         P  +   +A +   AA+ +E 
Sbjct: 84  --LKGTPILVQLMLTYYGIPLALKALNQQWGTGFNINAIPAAVFAIVAFAFNEAAYASET 141

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + 
Sbjct: 142 IRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSA 201

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 202 GVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|238786078|ref|ZP_04630036.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia bercovieri ATCC 43970]
 gi|238795398|ref|ZP_04638913.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia mollaretii ATCC 43969]
 gi|238713017|gb|EEQ05071.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia bercovieri ATCC 43970]
 gi|238720517|gb|EEQ12318.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia mollaretii ATCC 43969]
          Length = 246

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQAAPFGNTTYLGWIWSGFQVTIALSLCAWVIAFFIGSLFGILRTVPNRILSGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+ + +      +     QF           F+S
Sbjct: 65  GTCYVELFRNVPLIVQFFTWYLVVPELLPVDIGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SVICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMVNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLVMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  IG+L G 
Sbjct: 3   IDWNWGIFLQAAPFG----------NTTYLGWIWSGFQVTIALSLCAWVIAFFIGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP
Sbjct: 53  LRTVPNRILSGIGTCYVELFRNVPLIVQFFTWYLVVPELLP 93


>gi|119383823|ref|YP_914879.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373590|gb|ABL69183.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 230

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 7/224 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F    +  +  +   +FV G+VL      L +H        L   Y++        ++
Sbjct: 13  LPFLWKGLQFSLLLTAVAFVAGLVLGTGL-ALVQHLQVPVLAQLAKGYVALIR-----SI 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            LI + +   F  P++  + F  G  +     ++ ++  S + AA+ +EI+R GL +V +
Sbjct: 67  PLIMVLFWFFFLVPLIAGWMFNNGRPMPVGGVLTAFLTFSLFEAAYYSEIIRVGLRSVGK 126

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA AL L+  +  R ++LPQ  R   P + SQ + L +++SL   +   DLV    
Sbjct: 127 GQYEAADALSLSTLQTYRHIILPQVFRVTSPIILSQTIILFQDTSLVYVLSLTDLVGAAS 186

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +    G+ +E+ L    +YL +    +  +  L  +  +   +
Sbjct: 187 KVAQLNGRLVEMYLTVAAVYLVICTSASQLVAVLRKRTRIATNR 230



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 41/106 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   +  L     +   ++GT +   +     ++A + + YV + R+IP ++V+F+ 
Sbjct: 16  LWKGLQFSLLLTAVAFVAGLVLGTGLALVQHLQVPVLAQLAKGYVALIRSIPLIMVLFWF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +  V  +     ++        +    L+F        ++I     
Sbjct: 76  FFLVPLIAGWMFNNGRPMPVGGVLTAFLTFSLFEAAYYSEIIRVGL 121


>gi|94994195|ref|YP_602293.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS10750]
 gi|94547703|gb|ABF37749.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS10750]
          Length = 216

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+
Sbjct: 52  YLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSLA 
Sbjct: 104 EVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 164 MITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|300313889|ref|YP_003777981.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076674|gb|ADJ66073.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 277

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 14/212 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                         K+   + ++G+ + +F    +++   +        YI   ++   P
Sbjct: 12  PYWPVFLHGAWLTLKMTTLAVIVGVAIGIFV-AFAKNSPHRWLARGCSAYIE--VVRNTP 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y           F         P F +  +A+    AA+ AEI+R+GL +VP
Sbjct: 69  FLVQIFLLY-----------FGLASLGIRMPTFAAAVLAMIINIAAYAAEIIRAGLDSVP 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA  LGL+  +    V+L  A+  + P LTSQ+L +++ S++A  +   +L ++ 
Sbjct: 118 RGQIEAAQCLGLSVWRIRWHVMLQPAIERVYPALTSQFLLMMQASAMASQISAEELTAIA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            T+ + T +++E  L+   +YL L+I++ L  
Sbjct: 178 NTVQSDTFRSLETYLVVAALYLVLAILVKLVA 209



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 5/162 (3%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  + Y    L G   T  +    +I    IG  V   + S ++ +A  C  Y+EV 
Sbjct: 5   LDFSPLAPYWPVFLHGAWLTLKMTTLAVIVGVAIGIFVAFAKNSPHRWLARGCSAYIEVV 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFS 193
           RN P LV IF LY  + S+             M +N    +   +    ++        +
Sbjct: 65  RNTPFLVQIFLLYFGLASLGIRMPTFAAAVLAMIINIAAYAAEIIRAGLDSVPRGQIEAA 124

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
             LG  LS++  R          +  P L     L+     +
Sbjct: 125 QCLG--LSVWRIRWHVMLQPAIERVYPALTSQFLLMMQASAM 164


>gi|323529860|ref|YP_004232012.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386862|gb|ADX58952.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 216

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +    +G  +++     +R    +  +     Y+  F                +  
Sbjct: 22  IGVSLTGLFIGFFVAVGVCA-ARLSGNRAARRFGGAYVFFFR------------GVPMLV 68

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++       G  VSP  ++   A+S  +A++IAEI+R G +++P G +EAA  LGL+
Sbjct: 69  QLLLVYYLLPFAGINVSP-LVAAVSAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L+PQA R  +P L ++ + L+K SSL   VG A+L      I   T + +E 
Sbjct: 128 PFDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEA 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            L    IY  +   +AL  +    ++ 
Sbjct: 188 YLAAGLIYFVICGALALIAHAAEYRLK 214


>gi|229523881|ref|ZP_04413286.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae bv. albensis VL426]
 gi|229337462|gb|EEO02479.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae bv. albensis VL426]
          Length = 260

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------PVLGQFNF 256
             R     +    + +P L +   + FG   L+   L +   F         P      +
Sbjct: 60  WARAIATLYTTIIRGIPDLVLMMLIFFGGQILLNNGLSWFNEFINQWLRARDPNHEWVAY 119

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LL
Sbjct: 120 LPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILL 179

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  IP   + +L LLK ++L   +G  D+V +       T       +    I+L 
Sbjct: 180 PQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLF 239

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + +    +  L  K ++  +
Sbjct: 240 FTSVSTGLLKLLERKFSIHTR 260



 Score = 36.8 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A ++G L    +++  +    I  +Y  + R IP LV+
Sbjct: 21  YEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVL 80

Query: 145 IFFLYKSVLS--------VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++                  +  +            L          A +    F+ 
Sbjct: 81  MMLIFFGGQILLNNGLSWFNEFINQWLRARDPNHEWVAYLPDYVDISPFVAGVLTIGFIF 140

Query: 197 GIVLS 201
           G  ++
Sbjct: 141 GAYMA 145


>gi|227878268|ref|ZP_03996232.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256844162|ref|ZP_05549649.1| ABC transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256850466|ref|ZP_05555893.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|262047795|ref|ZP_06020746.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|293381403|ref|ZP_06627402.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|312976725|ref|ZP_07788474.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus CTV-05]
 gi|227862138|gb|EEJ69693.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus crispatus JV-V01]
 gi|256614067|gb|EEU19269.1| ABC transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256712671|gb|EEU27665.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|260571924|gb|EEX28494.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|290922011|gb|EFD99014.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|310896053|gb|EFQ45118.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus CTV-05]
          Length = 215

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 15/209 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               IF ++ +L   L +    L      K  + L   Y+  +++ G P L+ +   +  
Sbjct: 19  MTLSIFFWTLILATPLGILV-SLGEKSKFKPLRWLVNFYV--WIMRGTPLLLQLIFVF-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P++          V P + +   A     AA+ AEI R G  ++  GQ EAA  L 
Sbjct: 74  -YGLPIIH--------IVFPRYQAALFAFVLNYAAYFAEIFRGGFQSIDEGQFEAAKVLR 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +    +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G   + +    +
Sbjct: 125 LSRWQTMTKIIIPQVIKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVAMARD-VTL 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +++   IYL L  + A  + +L    +
Sbjct: 184 VPLVLVGVIYLLLISICAFVLKKLEKYFS 212



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  + F  +I AT +G LV  G  S  K + W+   YV + R  P L+ 
Sbjct: 9   ILPALLSGAGMTLSIFFWTLILATPLGILVSLGEKSKFKPLRWLVNFYVWIMRGTPLLLQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F++  +  +  +        F   LN              + 
Sbjct: 69  LIFVFYGLPIIHIVFPRYQAALFAFVLNYAAYFAEIFRGGFQSI 112


>gi|28900494|ref|NP_800149.1| arginine transporter permease subunit ArtM [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153837563|ref|ZP_01990230.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus
           AQ3810]
 gi|260365647|ref|ZP_05778168.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus K5030]
 gi|260877447|ref|ZP_05889802.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AN-5034]
 gi|260898928|ref|ZP_05907369.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus Peru-466]
 gi|260901238|ref|ZP_05909633.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AQ4037]
 gi|28808874|dbj|BAC61982.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149749060|gb|EDM59871.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus
           AQ3810]
 gi|308089208|gb|EFO38903.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus Peru-466]
 gi|308090586|gb|EFO40281.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AN-5034]
 gi|308106820|gb|EFO44360.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus AQ4037]
 gi|308111460|gb|EFO49000.1| octopine transport system permease protein OccM [Vibrio
           parahaemolyticus K5030]
          Length = 222

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++   S  +G +L+L  T L+          +    I+ F   
Sbjct: 1   MNEQHVWQMLDGLGTSLQLTAASLAVGCILALLMT-LTLILRTPGLHWVSRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +   +  + +S  +    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDAVRE--SVLWTWLSQPWFCAMLALALNTAAYSTQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPSGQWQACRALGMNKSATL-RVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  +    YLS++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLMVFGVAGAFYLSVNGILTLIFRQVEKK 215


>gi|207723708|ref|YP_002254106.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206588912|emb|CAQ35874.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 230

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 18/201 (8%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GIVL L           +      L + +T L++ +    L+ + +  +F  P +    
Sbjct: 42  VGIVLGLC----------RVSPIGVLRWPATALVYLVRGTPLLMVIFWAYFLLPSITG-- 89

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                  + +F ++  AL  +  A++AEIVR+G+ A+PRGQME+A +LGL++ +A R V+
Sbjct: 90  -----QRTDQFSTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLSYMQAMRRVI 144

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIY 374
           LPQA+R+++P L +Q ++ +K +SL   +   ++  +   I      ++ E   +    Y
Sbjct: 145 LPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFITTQISTAVMTKSAETYGLLALSY 204

Query: 375 LSLSIMIALFMNRLNAKIALK 395
             +   +      L  ++A +
Sbjct: 205 FVMCFGLTRCAYLLERRLAAR 225


>gi|261839725|gb|ACX99490.1| amino acid ABC transporter, permease protein [Helicobacter pylori
           52]
          Length = 229

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    + ++++L      +HF  K   A    Y+S  LI G P LV I + + 
Sbjct: 33  PLAIISFILGLFIAVLVALIKIAPPKHFIHKALLAGVNFYVS--LIRGTPLLVQIVVVFY 90

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  IA S    A+ +E +R+  ++VP+ Q +++++L
Sbjct: 91  -----------GLPAFGVYIDPIPAGIIAFSFNVGAYASETLRASFLSVPKDQWDSSLSL 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 140 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEVFRIAQQKANASYDF 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    +++ +    +  
Sbjct: 200 LPIYLEAALIYWLFCLVLEVIQKCVEK 226


>gi|154687483|ref|YP_001422644.1| YtmL [Bacillus amyloliquefaciens FZB42]
 gi|154353334|gb|ABS75413.1| YtmL [Bacillus amyloliquefaciens FZB42]
          Length = 240

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 6/190 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +          LYIS F   G P +V + + +   +  P L     I  S + P   +
Sbjct: 46  RIYRIPVLNQFAKLYISFF--RGTPIMVQLFIVF---YGIPALTALAGIDTSKMDP-LYA 99

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
                +  +AA  AEI+R G+ +V RGQ EAA ++GL   +  R ++LPQA+    P + 
Sbjct: 100 AIATYALSSAARAAEIIRGGVNSVDRGQAEAAFSIGLNGGQTFRRIILPQALVQAFPNIG 159

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  +  LK++SLA ++G  D+   G T+I  +  ++E+ +    +Y + +++        
Sbjct: 160 NMVIGFLKDTSLAFSIGVMDMSGRGQTLITSSNHSLEVYISLSVLYYAAALLFECVFRWA 219

Query: 389 NAKIALKEKK 398
             +I   E +
Sbjct: 220 EKRIKKDETR 229


>gi|186470876|ref|YP_001862194.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184197185|gb|ACC75148.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 220

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 14/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P  +      L        T   +   +   G    LF   +S             +
Sbjct: 1   MNAPDLLARCTAYLPQLLDGALTTLWLSAAAVFCGFFAGLFIYTMSA-SDSPLPAGAARV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F   G P L  + + Y L                   P  ++  I LS  TAA+ +
Sbjct: 60  YVSVF--RGTPVLAQLLVMYYLPSAL-----------GLALPGIVAAAIGLSMNTAAYQS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           +I+ +G  ++ RGQ+EAA+   LT R+    + +PQ +R  +P L S+ ++++K S++  
Sbjct: 107 QILGAGFRSIARGQIEAAVTFNLTRRQVLWHIEVPQVVRVTLPALVSEMIDIVKASAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +   DL+ VG  + + T + +E+       YL+++ +++   +    + A +
Sbjct: 167 VISVTDLMRVGQQLSSSTYRPLEVYTCAALFYLAITTLLSFAAHCYERRAASR 219



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T WL+ + +      G  +     S + L A   RVYV VFR  P L  
Sbjct: 13  YLPQLLDGALTTLWLSAAAVFCGFFAGLFIYTMSASDSPLPAGAARVYVSVFRGTPVLAQ 72

Query: 145 IFFLYK 150
           +  +Y 
Sbjct: 73  LLVMYY 78


>gi|148655935|ref|YP_001276140.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus sp. RS-1]
 gi|148568045|gb|ABQ90190.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus sp. RS-1]
          Length = 224

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   S  LG+++ L    + R +     + +   Y++ F   G P L+ + + Y  
Sbjct: 21  VTLQIAAVSLTLGMIIGLPVG-VGRVYGPGWVQRILGAYVTLF--QGTPLLIQLFMAYY- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  + ++ L   +AA+ AE +RS L +V  GQM AA ALG
Sbjct: 77  ----------GLPDIGITLGRLQAAFLTLGLNSAAYQAEYLRSALQSVSEGQMTAARALG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A   ++LPQA+R  +P  +++ + +LK +S+   +   DL+     + ++    I
Sbjct: 127 MSKWQAIWSIILPQAVRLALPAWSNEAVAMLKYTSVVFLIAVPDLMGQAKILSSRYFAPI 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +I LI    Y+ L  +  L +  +  ++ +
Sbjct: 187 QIYLIVAVFYIVLVGITYLILTWIERRVRI 216



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 37/99 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +A   +    IIG  VG GR+     V  I   YV +F+  P L+ +F  
Sbjct: 15  LLQGTVVTLQIAAVSLTLGMIIGLPVGVGRVYGPGWVQRILGAYVTLFQGTPLLIQLFMA 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +             + LN+       L     +
Sbjct: 75  YYGLPDIGITLGRLQAAFLTLGLNSAAYQAEYLRSALQS 113


>gi|323127407|gb|ADX24704.1| cystine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 216

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 8/178 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +   L Y+    I  +  + +I + + L+F  P              P  +  Y+  S  
Sbjct: 46  RQPLLHYLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMV 97

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K
Sbjct: 98  SAAYISEVFRSSIEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIAVPPLGNVIIDMVK 157

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +SSLA  +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 158 SSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|298293523|ref|YP_003695462.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930034|gb|ADH90843.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 219

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 99/233 (42%), Gaps = 14/233 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +  + L              + S  +G  +       +     K  +A+   Y+S
Sbjct: 1   MFNTAIIVKSLPMLLEASVWTVVYSLTSVAIGFCIGTLMCA-AGLSQSKPMRAIAAFYVS 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G+P LV + + Y   +  P++            P  ++    L+  T A+IAEI+
Sbjct: 60  FF--RGVPLLVQLLISY---YCLPLI--------GVNVPSSVAAVGTLALCTGAYIAEIL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G + +P G +EAA  +GL   +    + +P A+R  +P L ++   ++K SSL   VG
Sbjct: 107 RGGFLGIPAGLIEAARMVGLNRVQILTRIEVPMAVRFTLPSLVNETTMMVKASSLISVVG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +L  +   I   T Q +EI L    IY  ++  I L  +   ++  +++ +
Sbjct: 167 VLELTRLAQNIATSTFQPLEIYLTAGAIYFLINGAITLAGDFAESRFRVEKAR 219



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   V T   + + +     IGTL+ A  LS +K +  I   YV  FR +P LV +   
Sbjct: 14  LLEASVWTVVYSLTSVAIGFCIGTLMCAAGLSQSKPMRAIAAFYVSFFRGVPLLVQLLIS 73

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y  +  +      S+     +
Sbjct: 74  YYCLPLIGVNVPSSVAAVGTL 94


>gi|239620787|ref|ZP_04663818.1| permease protein of ABC transporter system [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|239516363|gb|EEQ56230.1| permease protein of ABC transporter system [Bifidobacterium longum
           subsp. infantis CCUG 52486]
          Length = 264

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 14/235 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + F      R   F          I VF  +L I + L              + +  +
Sbjct: 44  RPMTFDWSFVQRYAPFFVNGTLMTLFISVFGILLAIAVGLV-CAGVEIARIPVARQIVRI 102

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P LV +   Y L+F  P L          V        + L     +++A
Sbjct: 103 YIE--LSRNTPLLVQL---YFLYFGLPKL--------GVVWSAETCAIVGLGFLGGSYMA 149

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R GL AVP  Q E A  LGLT  +    V+LPQA+ + IP + +  + L K SS+  
Sbjct: 150 EAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVS 209

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+  AD++ +   +I       E + + +  YL + + I++F   L  +   + +
Sbjct: 210 AIALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISIFGTWLERRFDYERR 264



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 40/78 (51%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA   + G + T +++  G++ A  +G +     ++   +   I R+Y+E+ R
Sbjct: 49  DWSFVQRYAPFFVNGTLMTLFISVFGILLAIAVGLVCAGVEIARIPVARQIVRIYIELSR 108

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV ++FLY  +  +
Sbjct: 109 NTPLLVQLYFLYFGLPKL 126


>gi|254466546|ref|ZP_05079957.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
 gi|206687454|gb|EDZ47936.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium Y4I]
          Length = 235

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 11/197 (5%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L   RL    +    + LP +     +  G   L+   L++      P           T
Sbjct: 49  LLPLRLLGFGYTTVMRGLPEILTLFVVYNGAGLLINAVLQWWAPEAAP-----------T 97

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F +  +AL     AF AE++R    ++  GQ EA  A+G+T R+    + LPQ  R
Sbjct: 98  DFSPFAAGVVALGMVFGAFAAEVLRGAFQSLDSGQAEAGRAIGMTARQIFLRIRLPQVWR 157

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L + ++N+LK+++L   +   DL+ +    +  T Q     L+   IY +L ++ 
Sbjct: 158 FALPGLGNLWINMLKDTALVSVIALDDLMRMTKVAVGVTKQPFTFYLLACLIYWALCVLS 217

Query: 382 ALFMNRLNAKIALKEKK 398
            L + ++  +     ++
Sbjct: 218 ELVLAQMERRANRGIRR 234


>gi|205353467|ref|YP_002227268.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205273248|emb|CAR38211.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326628559|gb|EGE34902.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 235

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 96/223 (43%), Gaps = 8/223 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++ +    +   +T+       V   +L ++L++     ++  H          ++ T++
Sbjct: 13  LWTDGYRFTGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIHFPI-------WLFTYI 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI    
Sbjct: 66  FRGTPLYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP G++EAA A G +  K  R ++L  A+R  +P  +++ + +L +++LA      D
Sbjct: 125 IRSVPHGEIEAARAYGFSSFKMYRCIILLSALRIALPAYSNEVILMLHSTALAFTATVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+ +   I + T Q      I   +YL +S ++     R   +
Sbjct: 185 LLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERR 227


>gi|323351208|ref|ZP_08086864.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322122432|gb|EFX94143.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 226

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 10/176 (5%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  + L  +++        P LV   + +   +  P++  +     + +   + +  + +
Sbjct: 52  KVLRGLARIFVEF--YQNTPLLVQFVIVF---YGLPLVSNY-----TIMPSIYWTAVLCV 101

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y  A+IAE++RSG+ ++PRGQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +N
Sbjct: 102 GLYHGAYIAEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVN 161

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           L+KN+S    +   DL+ V  +        I        +Y  L   IA +  ++ 
Sbjct: 162 LIKNTSTVAIISGMDLMFVTKSWSALNSNYIPAFAGAALLYFLLCFPIASWGRKVE 217



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +  A ++G   GA     +K++  + R++VE ++N P LV    +
Sbjct: 18  FFQGFLFTLAISIGALTLALLLGIFFGAISTGKHKVLRGLARIFVEFYQNTPLLVQFVIV 77

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  V        +  
Sbjct: 78  FYGLPLVSNYTIMPSIYW 95


>gi|257882304|ref|ZP_05661957.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|294623622|ref|ZP_06702460.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           U0317]
 gi|257817962|gb|EEV45290.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|291596948|gb|EFF28161.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           U0317]
          Length = 213

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +  + L     T+       + S  LGIVL+L         H K  +   LL  
Sbjct: 1   MEYLIEVMPQLLVGALTTLKLFLFTLIGSLPLGIVLALGL-----SLHFKPLRY--LLQT 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   +                   V   F +  IA     AA+ AEI
Sbjct: 54  YVWVMRGTPLLLQLIFIFY-----------GLPTIGIVFDRFEAALIAFILNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGIQSIPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYIL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++  G   + +    +  +L    IYL+L+ ++ + M ++  K+    
Sbjct: 163 GLGDVMRAGKIAMERDA-TLLPLLGVAIIYLTLTGILTIIMKQVEGKLNYYR 213



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG + T  L    +I +  +G ++  G     K + ++ + YV V R  P L+ + F+
Sbjct: 11  LLVGALTTLKLFLFTLIGSLPLGIVLALGLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + ++  + D          LN              + 
Sbjct: 71  FYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSI 110


>gi|227877816|ref|ZP_03995840.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus crispatus JV-V01]
 gi|256850694|ref|ZP_05556118.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           MV-1A-US]
 gi|227862577|gb|EEJ70072.1| glutamine ABC superfamily ATP binding cassette transporter membrane
           protein [Lactobacillus crispatus JV-V01]
 gi|256712465|gb|EEU27462.1| glutamine ABC transporter membrane protein [Lactobacillus crispatus
           MV-1A-US]
          Length = 217

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFV+G++L L      ++     G    
Sbjct: 2   ETFIHAYSWVDIRFLLQGLWVTIYVSLISIALSFVVGLILGLVRYMKIKYVSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+    +   AL  +  A 
Sbjct: 58  ------FIIDIIRNLPLLLIIFFTYFGLPQL--------GIVTNPTTASIAALVIFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ +V  GQME A + G+++ +A   V++PQA+ ++I  L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIGSVDSGQMEGARSNGMSYGQAMYHVIMPQALHNMISALLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   ++   N L  K 
Sbjct: 164 ATIIVLPELLYHAQIIYSQNTTYLIPMYVIIAIMYFIVCFCLSTIANYLQKKY 216



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 36/71 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R    K V+ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|167589674|ref|ZP_02382062.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 216

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F   + L+   L       + + SFV    L      + R       +    LYI  F  
Sbjct: 4   FTFGQILANLLLAARWTIVLSIVSFV-SGGLVGLGLLVMRVSSSTVLRGSAKLYIEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +   F  P++            P +++    L+ +T+A++AEI R  +
Sbjct: 61  QGTPLLMQLFIVF---FGLPLV--------GLDVPPWVAATAGLTFFTSAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP+GQ EA+ +L +++ +  R V+LPQA R  I P     +  +K+++L   +GF +L
Sbjct: 110 EAVPKGQWEASASLAMSYIEQLRHVILPQAARIAIAPTVGFGVQAVKDTALVSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             VG  I N T +   +  +   IY +L   +  +   L  +
Sbjct: 170 TKVGIAISNATFRPFVVYGLVALIYFALCYPLTRYARTLQRR 211



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+    T  L+    +   ++G  +   R+S++ ++    ++Y+EVF+  P L+ +F +
Sbjct: 13  LLLAARWTIVLSIVSFVSGGLVGLGLLVMRVSSSTVLRGSAKLYIEVFQGTPLLMQLFIV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  +  V       +    G+                 A
Sbjct: 73  FFGLPLVGLDVPPWVAATAGLTFFTSAYLAEIWRGCVEA 111


>gi|147674527|ref|YP_001217396.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|146316410|gb|ABQ20949.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227013760|gb|ACP09970.1| amino acid ABC transporter, permease protein [Vibrio cholerae O395]
          Length = 260

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------PVLGQFNF 256
             R     +    + +P L +   + FG   L+   L +   F         P      +
Sbjct: 60  WARAIATLYTTIIRGIPDLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAY 119

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LL
Sbjct: 120 LPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILL 179

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  IP   + +L LLK ++L   +G  D+V +       T       +    I+L 
Sbjct: 180 PQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLF 239

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + +    +  L  K ++  +
Sbjct: 240 FTSVSTGLLKLLERKFSIHTR 260



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G + T  +A   ++ A ++G L    +++  +    I  +Y  + R IP LV+
Sbjct: 21  YEASILKGALLTIEIAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVL 80

Query: 145 IFFLYKSVLS--------VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++                  +  +            L          A +    F+ 
Sbjct: 81  MMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFIF 140

Query: 197 GIVLS 201
           G  ++
Sbjct: 141 GAYMA 145


>gi|322376912|ref|ZP_08051405.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282719|gb|EFX59726.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|327389646|gb|EGE87991.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 266

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 99/231 (42%), Gaps = 5/231 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +     G+      + T   + +   + G+VL+L    + +    K    L   ++S 
Sbjct: 25  FSLRSVFDGIPRIVQQLPTTIMLTIGGALFGLVLALL-FAIVKINRVKILYPLQAFFVSF 83

Query: 227 FLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEI 284
             + G P LV + L  Y +      L Q    G      P  +   +A +   AA+ +E 
Sbjct: 84  --LKGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAVFAIVAFAFNEAAYASET 141

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + 
Sbjct: 142 IRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSA 201

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 202 GVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|197286729|ref|YP_002152601.1| amino acid ABC transporter permease [Proteus mirabilis HI4320]
 gi|194684216|emb|CAR45715.1| putative amino acid ABC transporter, permease protein [Proteus
           mirabilis HI4320]
          Length = 249

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 9/228 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  +N          D   +    +  + ++  + +  L             +   
Sbjct: 1   MDFTVIADNWQYLLFGAYPDGPLEGAALTIFISVIAGIVSIILGTLGGIALAMLKGVWVN 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                 G    + +I L + L+F  PV+            PE  ++  AL+  T+++IA 
Sbjct: 61  LFAAFLGFFRAIPVIMLIFWLYFLLPVVLGMEI-------PEITTVICALALITSSYIAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V++G++A+ +GQ +A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  
Sbjct: 114 GVKAGILAIGKGQWQAGLSLGFNRWQTLWYIVLPQALRMMVPSFINQWIALIKDTSLAYV 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           VG  +L  +   + N++    +E+ L   FIY  L   + L  NR+  
Sbjct: 174 VGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLELIANRVGK 221


>gi|170016650|ref|YP_001727569.1| amino acid ABC transporter permease [Leuconostoc citreum KM20]
 gi|169803507|gb|ACA82125.1| Amino acid ABC transporter, permease protein [Leuconostoc citreum
           KM20]
          Length = 232

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 99/213 (46%), Gaps = 16/213 (7%)

Query: 189 IFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLY-----ISTFLIFGLPTLVLIALK 241
           + + SF L I+ ++     R+ +       + L L+         +L    P +V + + 
Sbjct: 26  LTIISFTLAIIFAVITAVIRIMKLPKSPIIRWLTLIIKSMASFYVWLFRSTPMIVQLFIV 85

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +                 +  +  +++     S  T A+ AE +R+ + +VP  Q EAA 
Sbjct: 86  FY---------GLPNAHITLFANAWVAAITVFSLNTGAYAAESIRAAITSVPAVQKEAAE 136

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG++  +  R ++LPQA R  IPPL++  ++LLK++SLA  +   ++  +   I  +  
Sbjct: 137 SLGMSPFQVYRHIILPQAARISIPPLSNSLISLLKDTSLASVITIVEMFYLSQQIAAENY 196

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + + + L+   +Y +++ ++++  + L    + 
Sbjct: 197 KILSMYLLVALVYAAMTTILSIGQHYLERYTSR 229


>gi|22125504|ref|NP_668927.1| histidine transport system permease HisM [Yersinia pestis KIM 10]
 gi|45442177|ref|NP_993716.1| histidine transport system permease HisM [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596927|ref|YP_071118.1| ABC histidine transporter, permease subunit HisM [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808061|ref|YP_651977.1| histidine transport system permease HisM [Yersinia pestis Antiqua]
 gi|108812333|ref|YP_648100.1| histidine transport system permease protein HisM [Yersinia pestis
           Nepal516]
 gi|145599263|ref|YP_001163339.1| histidine transport system permease protein HisM [Yersinia pestis
           Pestoides F]
 gi|149365250|ref|ZP_01887285.1| histidine transport system permease protein HisM [Yersinia pestis
           CA88-4125]
 gi|153949106|ref|YP_001400409.1| histidine ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|165925351|ref|ZP_02221183.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937059|ref|ZP_02225624.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008599|ref|ZP_02229497.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166214207|ref|ZP_02240242.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398635|ref|ZP_02304159.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421140|ref|ZP_02312893.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424656|ref|ZP_02316409.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167469029|ref|ZP_02333733.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           FV-1]
 gi|170023781|ref|YP_001720286.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186896007|ref|YP_001873119.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929848|ref|YP_002347723.1| histidine transport system permease HisM [Yersinia pestis CO92]
 gi|229838348|ref|ZP_04458507.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895378|ref|ZP_04510551.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|229898914|ref|ZP_04514059.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902686|ref|ZP_04517803.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|270490137|ref|ZP_06207211.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504639|ref|YP_003568701.1| histidine transport system permease protein HisM [Yersinia pestis
           Z176003]
 gi|21958401|gb|AAM85178.1|AE013764_2 histidine ABC transporter, inner membrane permease [Yersinia pestis
           KIM 10]
 gi|45437041|gb|AAS62593.1| histidine transport system permease protein HisM [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590209|emb|CAH21846.1| ABC histidine transporter, permease subunit HisM [Yersinia
           pseudotuberculosis IP 32953]
 gi|108775981|gb|ABG18500.1| histidine transport system permease protein HisM [Yersinia pestis
           Nepal516]
 gi|108779974|gb|ABG14032.1| histidine transport system permease protein HisM [Yersinia pestis
           Antiqua]
 gi|115348459|emb|CAL21395.1| histidine transport system permease protein HisM [Yersinia pestis
           CO92]
 gi|145210959|gb|ABP40366.1| histidine transport system permease protein HisM [Yersinia pestis
           Pestoides F]
 gi|149291663|gb|EDM41737.1| histidine transport system permease protein HisM [Yersinia pestis
           CA88-4125]
 gi|152960601|gb|ABS48062.1| histidine ABC transporter, permease protein HisM [Yersinia
           pseudotuberculosis IP 31758]
 gi|165914922|gb|EDR33534.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922958|gb|EDR40109.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992981|gb|EDR45282.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166204563|gb|EDR49043.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960629|gb|EDR56650.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051139|gb|EDR62547.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056538|gb|EDR66307.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169750315|gb|ACA67833.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186699033|gb|ACC89662.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229680133|gb|EEO76232.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|229688462|gb|EEO80533.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694714|gb|EEO84761.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701686|gb|EEO89712.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|262362700|gb|ACY59421.1| histidine transport system permease protein HisM [Yersinia pestis
           D106004]
 gi|262366627|gb|ACY63184.1| histidine transport system permease protein HisM [Yersinia pestis
           D182038]
 gi|270338641|gb|EFA49418.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355098|gb|ADE65439.1| histidine transport system permease protein HisM [Yersinia pestis
           Z176003]
 gi|320014578|gb|ADV98149.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 238

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 96/218 (44%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    M     + + S V+G +L+L    ++R    +  +    ++I T++  G P
Sbjct: 14  WSDGYRFTGMAVTLWLLISSVVMGGLLALPL-AVARVSERRWIRL--PVWIFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   + +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYSLEIIRGNDLL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      D++ + 
Sbjct: 130 HGEIEAARAYGFSRFKLYRCIILPAALRISLPAYSNEVILMLHSTALAFTATVPDILKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YLS+S  +     +   +
Sbjct: 190 RDINAATYQPFYAFSIAAVLYLSISFTLISLFRQAEKR 227



 Score = 36.1 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 84  SYATAIL-------VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
            Y  A+L        G   T WL  S ++   ++   +   R+S  + +     ++  +F
Sbjct: 7   QYWQALLWSDGYRFTGMAVTLWLLISSVVMGGLLALPLAVARVSERRWIRLPVWIFTYIF 66

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           R  P  V +   Y  + S+  I  + ++  F 
Sbjct: 67  RGTPLYVQLLVFYSGMYSLEIIRGNDLLNAFF 98


>gi|322374584|ref|ZP_08049098.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|321280084|gb|EFX57123.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 257

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PL       + G P LV + L Y       K +  Q+         P  +   +A +   
Sbjct: 66  PLQAFFVSFLKGTPILVQLMLTYYGIPLLLKAINQQWGTGFNINAIPAALFAIVAFAFNE 125

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 126 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 185

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SLA + G  ++ +    +     +  E  +    +Y  ++I I      +  ++A+ 
Sbjct: 186 TSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERRMAIS 243


>gi|300718065|ref|YP_003742868.1| octopine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299063901|emb|CAX61021.1| octopine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 228

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 2/169 (1%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             FL  G P L+ I + Y    +   +          +   +    +AL    AA+ +EI
Sbjct: 54  YVFLFRGTPLLIQIFMIYYGLGNISAIRHSFL--WPFLRDPYWCGLLALILNDAAYTSEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ AVP G +EAA   G++     + + LP A+R  +P  +++ +++ K++SL   +
Sbjct: 112 LRGGIRAVPAGAIEAARVCGMSKFTILKRITLPIAVRQALPAYSNEVISMAKSTSLVSTI 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              D+  +    ++ T +A+E+ +    IYL++S+++   ++     ++
Sbjct: 172 SLMDVTGIANAEVSSTYRALEVFISAAVIYLAISLIVTKGLSLFEKYLS 220


>gi|261210506|ref|ZP_05924799.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. RC341]
 gi|260840291|gb|EEX66862.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. RC341]
          Length = 246

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    +  + +  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARWIATLY--TTIIRGIPDLVLMMLIFFGGQIFLNNGLSSINEFLNQ 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFTQSDPNHEWVSYLPDYIDVSPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  IP   + +L LLK ++L   +G  D+V +       T  
Sbjct: 152 YGMSSAMSFRRILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  K ++  +
Sbjct: 212 PFTFYMAVAVIFLFFTSVSTGLLKLVERKFSIHTR 246



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A I+G L    +++  +   WI  +Y  + R IP LV+
Sbjct: 7   YEASIAKGALVTIEVALLSLLLAVILGMLGALAKMAPYRWARWIATLYTTIIRGIPDLVL 66

Query: 145 IF--------FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +         FL   + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQIFLNNGLSSINEFLNQWFTQSDPNHEWVSYLPDYIDVSPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|84393752|ref|ZP_00992500.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84375614|gb|EAP92513.1| amino acid ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 246

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ + S +L +VL      L++    +  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  LTIEVALLSLILAMVLG-MLGALAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P      ++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV  G+MEAA A G+    A R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDSGEMEAAKAYGMGPVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V V       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLEDMVRVSALAAGSTKMPFTFYMTVALIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G V T  +A   +I A ++G L    +L+  +    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|330429590|gb|AEC20924.1| putative amino acid ABC transporter permease protein [Pusillimonas
           sp. T7-7]
          Length = 365

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 14/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+F  +   +     +     +  F   +     L    L R  H    KAL ++YI
Sbjct: 140 MWGGVFGLSHVENSRWGGLPLTLILATFGIAVAFPFGLLL-ALGRRSHMPAVKALCVVYI 198

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L +L+ ++           +    F+       + +   IA+  + AA++AE 
Sbjct: 199 ELIRGVPLISLLFMS----------SVMLPLFLPEGFSIDKLLRAQIAIILFAAAYVAET 248

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL A+P+GQ E A ++GL++ +  R ++LPQA++ +IPPL   +++L K++SL V +
Sbjct: 249 VRGGLQAIPKGQYEGADSIGLSYWQQMRKIILPQALKVVIPPLVGIFISLFKDTSLVVII 308

Query: 345 GFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  DL     T +      G + E  L   FIY      I+ +   L   +    ++
Sbjct: 309 GIFDLTQAAKTAVADAAWRGFSTEAYLFIAFIYFIFCYSISRYSQSLEKHLQTGYQR 365



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 57/191 (29%), Gaps = 4/191 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  LA  G+  A   G L+  GR S    V  +C VY+E+ R +P + ++F     
Sbjct: 157 GLPLTLILATFGIAVAFPFGLLLALGRRSHMPAVKALCVVYIELIRGVPLISLLFMSSVM 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   LP       L           +             +    +     I LS +    
Sbjct: 217 LPLFLPEGFSIDKLLRAQIAIILFAAAYVAETVRGGLQAIPKGQYEGADSIGLSYWQQMR 276

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                +     +P L      +F   +LV+I   + L              G +      
Sbjct: 277 KIILPQALKVVIPPLVGIFISLFKDTSLVVIIGIFDLTQAAKTAVADAAWRGFSTEAYLF 336

Query: 268 SLYIALSCYTA 278
             +I      +
Sbjct: 337 IAFIYFIFCYS 347


>gi|300690823|ref|YP_003751818.1| amino acid transmembrane abc transporter protein [Ralstonia
           solanacearum PSI07]
 gi|299077883|emb|CBJ50522.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum PSI07]
          Length = 230

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 18/206 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +   GI+L L           +      L + +T L++ +    L+ + +  +F  P 
Sbjct: 37  VLALPAGILLGLC----------RVSPFRVLRWPATALVYVVRGTPLLMVIFWAYFLLPT 86

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L           + +F ++  AL  +  A++AEIVR+G+ A+PRGQME+A +LGL + +A
Sbjct: 87  LTG-------QRTDQFNTMLTALVIFDGAYLAEIVRAGIQALPRGQMESARSLGLPYLQA 139

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILI 369
            RLV+LPQA+R+++P L +Q ++ +K +SL   +   ++  V G I      Q+ E+  +
Sbjct: 140 MRLVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSFVAGQISTAVMTQSAEVYGL 199

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
               Y ++   +      L  ++A +
Sbjct: 200 LALSYFAMCFGLTRVAFLLERRLAAR 225



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%)

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + A   G L+G  R+S  +++ W     V V R  P L+VIF+ Y  + ++         
Sbjct: 37  VLALPAGILLGLCRVSPFRVLRWPATALVYVVRGTPLLMVIFWAYFLLPTLTGQRTDQFN 96

Query: 165 LP 166
             
Sbjct: 97  TM 98


>gi|224826755|ref|ZP_03699855.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224600975|gb|EEG07158.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 224

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 11/202 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
              LG VL+L      R    +        Y++ F      ++ L+ +    +F  P++ 
Sbjct: 34  GVALGTVLALM-----RLSSNRLLSGASKFYVNYFR-----SIPLLLVITWFYFVVPLIF 83

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           ++   G       F S  +A   + AA+ AEIVR+G+ ++ +GQ+ AA ALG+T+ +A R
Sbjct: 84  KW-ISGEFVAVGAFTSCLVAFMMFEAAYYAEIVRAGVQSISKGQLNAAYALGMTYGQAMR 142

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L++LPQA R ++P L  Q + L +++SL  AVG  D ++   +  +  GQ  E +++   
Sbjct: 143 LIILPQAFRKMMPLLLQQSIILFQDTSLVYAVGLMDFLNTARSKGDIVGQPNEFLILAGV 202

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
           +Y  +S   +  + RL  ++A+
Sbjct: 203 VYFVISFGASTVVKRLQKRLAV 224



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 40/110 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++        ++ G V T  L    +     +GT++   RLS+N+L++   + YV  FR
Sbjct: 5   DFSQIGPALPGLIDGMVLTLKLLLLAVSGGVALGTVLALMRLSSNRLLSGASKFYVNYFR 64

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +IP L+VI + Y  V  +        V                       
Sbjct: 65  SIPLLLVITWFYFVVPLIFKWISGEFVAVGAFTSCLVAFMMFEAAYYAEI 114


>gi|222086234|ref|YP_002544766.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723682|gb|ACM26838.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 267

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 2/212 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V +  LG+++  F   L++   E++ +    ++ + F       L L  + Y +
Sbjct: 55  VTITVAVLTLPLGLIVG-FLVALAQQSEERSLRLAAGVFTTIFRGL-PELLTLFIIYYGM 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +  +    G      F++  IALS   +A+ +E++ S   A+P+GQ EA  ALG
Sbjct: 113 QILLQTVLAYVGYEGPVEINAFVAGMIALSIVFSAYCSEVLLSAFRAIPKGQYEAGDALG 172

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
               +  RL++LPQ +R  +P L + ++NLLK++S    +G AD+V   G  +  T +  
Sbjct: 173 FHRVRTMRLIILPQLIRISLPNLGNLWMNLLKDTSYVSIIGLADIVRQTGLAVRSTKEPF 232

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +   +YL L+I+ +  ++ L+      E
Sbjct: 233 FFYAVACSLYLVLAIISSAGLSYLDRWAKRAE 264



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 59/156 (37%), Gaps = 8/156 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G   T  +A   +    I+G LV   + S  + +     V+  +FR +P L+ 
Sbjct: 45  WGDEIAGGLRVTITVAVLTLPLGLIVGFLVALAQQSEERSLRLAAGVFTTIFRGLPELLT 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  +  +L      +     + +N              A   VFS     VL L A
Sbjct: 105 LFIIYYGMQILLQTVLAYVGYEGPVEIN-------AFVAGMIALSIVFSAYCSEVL-LSA 156

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            R       + G AL    + T  +  LP L+ I+L
Sbjct: 157 FRAIPKGQYEAGDALGFHRVRTMRLIILPQLIRISL 192


>gi|222094396|ref|YP_002528455.1| ABC transporter , permease; glutamine ABC transporter , permease
           [Bacillus cereus Q1]
 gi|229194960|ref|ZP_04321741.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1293]
 gi|221238453|gb|ACM11163.1| ABC transporter, permease; probable glutamine ABC transporter,
           permease [Bacillus cereus Q1]
 gi|228588528|gb|EEK46565.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus m1293]
          Length = 214

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/217 (27%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIV-------RYTKIPVFSQILGVIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   + + I  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGIVRYTKIPVFSQILGVIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|288550479|ref|ZP_05970605.2| general amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315400|gb|EFC54338.1| general amino acid ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 323

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 67/339 (19%), Positives = 122/339 (35%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+ +R G +   G+ P+        A+ +G  +         I       +   GR  
Sbjct: 33  WVFIHQRFG-QFMYGLYPHEQRWRINLALAIGLFS---------IAVMFWKKVPHRGR-- 80

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                                             V+  P    VL +G FL    +    
Sbjct: 81  -----------------------------YIACWVVVYPVVVWVLLYGDFLGLERVETRQ 111

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               T   I     + G +       L R       + L +++I  +    L T++ ++ 
Sbjct: 112 WGGLTLTLIIASVGIAGALPWGILLALGRRSTMPVVRVLSVIFIEFWRGVPLITVLFMS- 170

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 171 ---------SVMLPLFMAEGTTIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 221

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L++ K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 222 ESLALSYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 281

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    IY      ++ +   L  +     
Sbjct: 282 AWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 320


>gi|325678775|ref|ZP_08158373.1| putative arginine ABC transporter, permease protein ArtQ
           [Ruminococcus albus 8]
 gi|324109279|gb|EGC03497.1| putative arginine ABC transporter, permease protein ArtQ
           [Ruminococcus albus 8]
          Length = 226

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 97/229 (42%), Gaps = 10/229 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G+      +               F  +L  +         R    K    L  LYIS  
Sbjct: 8   GLVPQIIDICRKLFEGFGATLSIFFLTLLFALPLGLLIAFGRMSKFKPLSLLTKLYIS-- 65

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P ++ + +     +       + F    +    F ++ I  S   AA+ AEI RS
Sbjct: 66  VVRGTPLMLQLLVVMFGPY-------YLFKVPISPDYRFYAVIIGFSLNYAAYFAEIYRS 118

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AVP+GQ EA   LG +  +    ++ PQ +++I+P +T++ + L+K++SLA A+ + 
Sbjct: 119 GIQAVPKGQYEACEILGYSRSQRFFKIVFPQMVKNILPSVTNEIITLVKDTSLAFAIAYT 178

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++ +V   +   +   I  + +    Y   + ++A  M  +  K+    
Sbjct: 179 EMFTVAKQVAA-SQATILPLFVAGLFYYVFNFLVAFIMELVEKKMNYYR 226



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 40/103 (38%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  GF  T  + F  ++ A  +G L+  GR+S  K ++ + ++Y+ V R  P ++ + 
Sbjct: 18  RKLFEGFGATLSIFFLTLLFALPLGLLIAFGRMSKFKPLSLLTKLYISVVRGTPLMLQLL 77

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            +      +  +P       + + +               + I
Sbjct: 78  VVMFGPYYLFKVPISPDYRFYAVIIGFSLNYAAYFAEIYRSGI 120


>gi|293396873|ref|ZP_06641147.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291420344|gb|EFE93599.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 222

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + + + V+ ++LSL  T +      K     PL+ I   L  G P 
Sbjct: 4   YLPEIAKGLHTSLTLTMAALVVALILSLLLTVI---LTLKIPVLTPLVKIYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P +  + ++      P ++   IAL+  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPAIRDYPWLWSLLSQP-WLCAMIALALNSAAYTTQLFYGAVRAIPA 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ R+    +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCEALGMSRRQTL-RILLPFAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      +YL ++ ++ L M  +  +    E++
Sbjct: 179 LMYGRTYDVM-VFAAAGLVYLIVNGLLTLLMRLVERRALAFERR 221


>gi|116670306|ref|YP_831239.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116610415|gb|ABK03139.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Arthrobacter sp. FB24]
          Length = 218

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 98/231 (42%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F + +    L     T+       + +  LG+V ++                 P++
Sbjct: 3   WDNNFAISVLPVLLQGLWTTVHITVMGTLLAAGLGLVFAVL-------RRLAIPVVSPVV 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                 + G P LV   + +           F             +  + +    +A++A
Sbjct: 56  SFLVVFVRGTPLLVQAYVAF-----------FVLPAYGVSFDALTTGIVVIGINYSAYMA 104

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RSG+  VP GQ EAA AL L   +    ++LPQA+R+++P L +  + + K+S++  
Sbjct: 105 EVYRSGIQGVPTGQWEAATALSLPGSRTWGRIILPQAIRTVVPMLGNYLIQMFKDSAVLS 164

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+   +L++    I + + + +E + +   ++L++S   +  +NRL  + A
Sbjct: 165 AITVVELMATAQAIGSSSFRYLEPLTLAALLFLAVSYPASRLVNRLERRYA 215



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    +L G   T  +   G + A  +G +    R  A  +V+ +    V   R  P LV
Sbjct: 10  SVLPVLLQGLWTTVHITVMGTLLAAGLGLVFAVLRRLAIPVVSPVVSFLVVFVRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
             +  +  + +     D        + +N          
Sbjct: 70  QAYVAFFVLPAYGVSFDALTTGIVVIGINYSAYMAEVYR 108


>gi|317404138|gb|EFV84586.1| amino acid ABC transporter permease [Achromobacter xylosoxidans
           C54]
          Length = 219

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 11/171 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LVL+ L +              + G        +  +A++ Y++AF+ EI R 
Sbjct: 59  VIQGTPLLVLMGLCFFGP----------SLFGLGELSALAAAGLAMTIYSSAFLGEIWRG 108

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV-AVGF 346
            + AVP+ Q EAA  LGL+  +    V+LPQA+R   PP     + ++KN+S+A   +G+
Sbjct: 109 CIQAVPKNQWEAAECLGLSRLQRMAKVVLPQALRIATPPTVGFLVQIIKNTSIASLVIGY 168

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L      + N T Q          +Y  +   ++ +   L  ++    +
Sbjct: 169 PELAYNAKILNNSTFQPFVYFGCAAILYFLMCYPLSRWSRSLERRLNASRR 219


>gi|295677663|ref|YP_003606187.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295437506|gb|ADG16676.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 246

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 111/222 (50%), Gaps = 8/222 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS   +T+  +   +V + ++G +  +      R    K    +  +Y++ F    +P
Sbjct: 25  WLLSGLWVTVTVSLSAWVIALIVGSLFGVL-----RTVPNKWASGVGTVYVAIF--RNIP 77

Query: 234 TLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V   + Y  +    PV     F      +  F +  + L  +TAA + E VRSG+ A+
Sbjct: 78  LIVQFFIWYLVIPELLPVSIGTWFKQLPPSAQFFSASIVCLGLFTAARVCEQVRSGINAL 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS++A  +G  DL + 
Sbjct: 138 PRGQRAAGLAVGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQ 197

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +++ T Q  E  +     Y+ +++++ L M  + AK  L
Sbjct: 198 ARQLVDYTSQTYESFIAVTVAYMLINLVVMLLMRWVEAKTRL 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 45/94 (47%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L G   T  ++ S  + A I+G+L G  R   NK  + + 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKWASGVG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            VYV +FRNIP +V  F  Y  +  +LP+   + 
Sbjct: 67  TVYVAIFRNIPLIVQFFIWYLVIPELLPVSIGTW 100


>gi|253687584|ref|YP_003016774.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754162|gb|ACT12238.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 224

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +    +T+       VF  V G +L++      R    K       LY++ F    
Sbjct: 13  MPYLIQGMVVTLKITLTAVVFGIVWGTILAVM-----RLSPIKPISWFAKLYVNLFRSVP 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV++ L + L    P L Q             +S  +A S + AA+ +EI+R+G+++
Sbjct: 68  ---LVMVLLWFYL--VVPSLLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGILS 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   +  AD   
Sbjct: 123 ISRGQSSAALALGMTHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFR 182

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              TI  + G  +E+IL   FIY   SI  ++ ++ L  +
Sbjct: 183 TASTIGERDGTQVEMILFAGFIYFIFSISASMLVSYLKKR 222



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 43/78 (55%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G V T  +  + ++   + GT++   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIGPSMPYLIQGMVVTLKITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLVVPSL 82


>gi|237653225|ref|YP_002889539.1| polar amino acid ABC transporter inner membrane subunit [Thauera
           sp. MZ1T]
 gi|237624472|gb|ACR01162.1| polar amino acid ABC transporter, inner membrane subunit [Thauera
           sp. MZ1T]
          Length = 230

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 91/215 (42%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ + S +L +   L      +       +   +LY  T ++ G+P LV++ L + 
Sbjct: 16  WVTLKVALMSVLLALATGLIGAA-CKLSGFLPLRLWTMLY--TTVMRGVPDLVMMLLVFY 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F         F++  + +     A+  E  R   +AV  GQ+EA  A 
Sbjct: 73  GGQLLLNAVIDYFGWDFIEIDPFVAGVLTIGLIFGAYFTETFRGAFLAVSAGQLEAGRAY 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R +L PQ +R  +P + + +L LLK++++   +G +D+  +       T Q 
Sbjct: 133 GMSALQVFRRILFPQMLRFALPGIGNNWLVLLKSTAIVSMIGLSDMTRIADQAGRSTHQP 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L    +YL+++ + +  +  L  + +   ++
Sbjct: 193 FTFYLAVCVLYLAMTALSSYGLGVLTRRYSAGVRE 227



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+ ++L G   T  +A   ++ A   G +  A +LS    +     +Y  V R +P LV+
Sbjct: 7   YSPSLLAGAWVTLKVALMSVLLALATGLIGAACKLSGFLPLRLWTMLYTTVMRGVPDLVM 66

Query: 145 IFFLYKSV 152
           +  ++   
Sbjct: 67  MLLVFYGG 74


>gi|218515611|ref|ZP_03512451.1| putative permease component of ABC transporter [Rhizobium etli
           8C-3]
          Length = 235

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 2/172 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+         +PTLV + L Y   F     G   ++        F    I L    AA
Sbjct: 57  PLVAAYVSYHRNVPTLVQLMLWYFGIFTLMPNGVATWLASHNAEAIF--AVIGLGLCQAA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + +E +RSG+ +V  GQMEAA ALG  +  A R V++PQ +R+ +PPL +  ++L KNSS
Sbjct: 115 YFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLFKNSS 174

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LAV +G ++L      I N + +  EI LI   +YL  S++I      L+ +
Sbjct: 175 LAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLVFSLVIMSIGAYLSMR 226


>gi|84394507|ref|ZP_00993217.1| amino acid ABC transproter, permease protein [Vibrio splendidus
           12B01]
 gi|84374860|gb|EAP91797.1| amino acid ABC transproter, permease protein [Vibrio splendidus
           12B01]
          Length = 223

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      + T  ++ ++     ++LSL    + R F       L  LYI
Sbjct: 1   MGFDFNYMLGLLPILLKYLGTTMEMAIWGLFFALILSLILANI-RVFKIPVLDQLSQLYI 59

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F   G P LV + L Y  L    P +   +          F +  I L+ + AA++AE
Sbjct: 60  SFF--RGTPLLVQLFLLYYGLPQVFPWMVGLD---------AFGAAVIGLTLHFAAYMAE 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +P L + +++++K++SLA  
Sbjct: 109 SIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVALPSLMNYFIDMIKSTSLAFT 168

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +G A++++      + + +  E  L    IY  + +++         K+
Sbjct: 169 LGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRIQIWAEVKL 217



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G+  A I+  ++   R+    ++  + ++Y+  FR  P LV +F L
Sbjct: 15  LLKYLGTTMEMAIWGLFFALILSLILANIRVFKIPVLDQLSQLYISFFRGTPLLVQLFLL 74

Query: 149 YKSVLSVLPIP 159
           Y  +  V P  
Sbjct: 75  YYGLPQVFPWM 85


>gi|22126709|ref|NP_670132.1| arginine transporter permease subunit ArtM [Yersinia pestis KIM 10]
 gi|45441074|ref|NP_992613.1| arginine transporter permease subunit ArtM [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51595715|ref|YP_069906.1| arginine transporter permease subunit ArtM [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806633|ref|YP_650549.1| arginine transporter permease subunit ArtM [Yersinia pestis
           Antiqua]
 gi|108812796|ref|YP_648563.1| arginine transporter permease subunit ArtM [Yersinia pestis
           Nepal516]
 gi|145599621|ref|YP_001163697.1| arginine transporter permease subunit ArtM [Yersinia pestis
           Pestoides F]
 gi|149366606|ref|ZP_01888640.1| arginine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|153948343|ref|YP_001401593.1| arginine transporter permease subunit ArtM [Yersinia
           pseudotuberculosis IP 31758]
 gi|162418971|ref|YP_001606086.1| arginine transporter permease ArtM [Yersinia pestis Angola]
 gi|165924357|ref|ZP_02220189.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938923|ref|ZP_02227476.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009895|ref|ZP_02230793.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211309|ref|ZP_02237344.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399927|ref|ZP_02305445.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419856|ref|ZP_02311609.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424248|ref|ZP_02316001.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470084|ref|ZP_02334788.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           FV-1]
 gi|170024938|ref|YP_001721443.1| arginine transporter permease subunit ArtM [Yersinia
           pseudotuberculosis YPIII]
 gi|218928497|ref|YP_002346372.1| arginine transporter permease subunit ArtM [Yersinia pestis CO92]
 gi|229841311|ref|ZP_04461470.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843414|ref|ZP_04463560.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229895787|ref|ZP_04510957.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Pestoides A]
 gi|229903211|ref|ZP_04518324.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Nepal516]
 gi|270487002|ref|ZP_06204076.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294503341|ref|YP_003567403.1| arginine transport system permease protein [Yersinia pestis
           Z176003]
 gi|21959728|gb|AAM86383.1|AE013886_8 arginine 3rd transport system permease protein [Yersinia pestis KIM
           10]
 gi|45435933|gb|AAS61490.1| arginine transport system permease protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588997|emb|CAH20615.1| ABC arginine transporter, permease subunit artM [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776444|gb|ABG18963.1| arginine transport system permease protein [Yersinia pestis
           Nepal516]
 gi|108778546|gb|ABG12604.1| arginine transport system permease protein [Yersinia pestis
           Antiqua]
 gi|115347108|emb|CAL20001.1| arginine transport system permease protein [Yersinia pestis CO92]
 gi|145211317|gb|ABP40724.1| arginine transport system permease protein [Yersinia pestis
           Pestoides F]
 gi|149290980|gb|EDM41055.1| arginine transport system permease protein [Yersinia pestis
           CA88-4125]
 gi|152959838|gb|ABS47299.1| arginine ABC transporter, permease protein ArtM [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351786|gb|ABX85734.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           Angola]
 gi|165913070|gb|EDR31694.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923417|gb|EDR40549.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991291|gb|EDR43592.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207080|gb|EDR51560.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962597|gb|EDR58618.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050635|gb|EDR62043.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057097|gb|EDR66860.1| arginine ABC transporter, permease protein ArtM [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751472|gb|ACA68990.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|229678981|gb|EEO75084.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Nepal516]
 gi|229689761|gb|EEO81822.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229697677|gb|EEO87724.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700710|gb|EEO88739.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis Pestoides A]
 gi|262361381|gb|ACY58102.1| arginine transport system permease protein [Yersinia pestis
           D106004]
 gi|262365082|gb|ACY61639.1| arginine transport system permease protein [Yersinia pestis
           D182038]
 gi|270335506|gb|EFA46283.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294353800|gb|ADE64141.1| arginine transport system permease protein [Yersinia pestis
           Z176003]
 gi|320015800|gb|ADV99371.1| arginine transporter subunit; membrane component of ABC superfamily
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 222

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT  A PL+ I   L  G P LV I L Y      P + ++ ++      P ++   IAL
Sbjct: 40  KTPIATPLVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLWSLLSQP-WLCAMIAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++ R++   +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPSGQWQSCEALGMSKRQSL-RILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K +SLA  +   +++     +  +T   + +      +YL ++ ++ L M  +  K  
Sbjct: 158 VFKGTSLAYTITLMEVMGYSQLMYGRTYDVM-VFGAAGVVYLCVNGLLTLLMRLVERKAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 AFERR 221


>gi|307728985|ref|YP_003906209.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583520|gb|ADN56918.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 237

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 91/224 (40%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTF 227
           +    R   +      T   I ++  V+ I L    +           K L  L+++ T+
Sbjct: 5   IQEYWRNYLYTDGYRFTGLAITLWLLVVSIGLGFCLSIPLAVARVSKKKWLAGLVWLYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +   ++     +  +          +A +  T A+  EI   
Sbjct: 65  IFRGTPLYVQLLLCYTGLYSLEIVRNHE-LTNAFFREGMNCTLLAFTLNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A      
Sbjct: 124 AIKATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ +   + + T Q+     I   +YL +S  +     R   +
Sbjct: 184 DILKIARDVNSATYQSFNAFGIAALLYLCISFALVWLFRRAERR 227



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A +  +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGLAITLWLLVVSIGLGFCLSIPLAVARVSKKKWLAGLVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR  P  V +   Y  + S+  + +H +   F     N  L   TL          
Sbjct: 62  YTYIFRGTPLYVQLLLCYTGLYSLEIVRNHELTNAFFREGMNCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|257455730|ref|ZP_05620958.1| histidine transport system permease protein HisQ [Enhydrobacter
           aerosaccus SK60]
 gi|257446858|gb|EEV21873.1| histidine transport system permease protein HisQ [Enhydrobacter
           aerosaccus SK60]
          Length = 239

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 5/184 (2%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP--VLGQFNFIGGSTVSPE 265
           ++    K   A+   Y  T +I G+P L+ +   Y         +L QF   G   VSP 
Sbjct: 39  AKMSRFKVLNAIATAY--TTIIRGIPELLSVMFIYFGGSMLMGLILSQFGNTGYVDVSP- 95

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +   ALS    A+  E  R     +P+GQ EAA A+G+   +    V LPQ  R  +P
Sbjct: 96  FWAGVTALSVAFGAYATETFRMAFQEIPKGQAEAAQAIGMKKFQILWRVTLPQVWRIALP 155

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + +L LLK+++L   VG  D++    T    T       +    +YLSL+++I   +
Sbjct: 156 GLGNLFLVLLKDTALVSVVGLEDIMRHAKTAATSTQSPFTFYMAAALLYLSLTVIITGVI 215

Query: 386 NRLN 389
             L 
Sbjct: 216 MWLE 219



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 11/113 (9%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA + ++   I+G L    ++S  K++  I   Y  + R IP L+ 
Sbjct: 7   FGQLLLSGAWVTIKLALTSLVIGLILGLLGATAKMSRFKVLNAIATAYTTIIRGIPELLS 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           + F+Y               +  G+ L+  G +         A +   S   G
Sbjct: 67  VMFIYFGG-----------SMLMGLILSQFGNTGYVDVSPFWAGVTALSVAFG 108


>gi|227329358|ref|ZP_03833382.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 218

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              F +   +    L       + + +F+ G +++     L R    K    L  LY   
Sbjct: 1   MMTFTDWDIVRNLLLAARWTLLLSLTAFIGGAIVTFPLMLL-RLTKRKWPTRLVHLYSEL 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P L+ + L +           F           + +  +AL+ +T+AF+ +I  
Sbjct: 60  F--QGTPLLMQLFLAF-----------FGLALFGIDVSPWTAAALALTLFTSAFLVDIWC 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ EA+  LGL   +    V+ PQAMR  I P     + ++K ++LA  +GF
Sbjct: 107 GSVEALPKGQWEASRCLGLDFGQTLYRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGF 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 167 IELTKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSYYSRYLEKKF 212


>gi|298530983|ref|ZP_07018384.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509006|gb|EFI32911.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 218

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I V+  + G+ L +    +      +         I
Sbjct: 1   MDFQYEFVLSTLPQLMQGVKLTIHITVYGLLGGMALGVLTGLI---LAYRIPVINYAGAI 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P +V     Y   F  P+       G         +  + L+    A+IAEI
Sbjct: 58  YVWIVRGTPIVVQAMFVY---FALPLAMGIRMTG-------VYAAILVLAINAGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  ++++ +G ++A +ALGL+  + TR ++ P A R +IPPL +Q++  LK++SL + +
Sbjct: 108 VRGAVLSINKGYVDAGLALGLSRFQVTRYIVGPLAFRRMIPPLGNQFIIGLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  I+  + +A+E+      IYL L+ ++AL +  L  ++ +
Sbjct: 168 GVGELTRQGQEIMASSFRALEVWTAVAIIYLVLTTVLALSLRWLERRMKI 217


>gi|327461007|gb|EGF07340.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 226

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 16/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLL 222
           M  +               + F+F+  + I     A  L   F        K  + L  +
Sbjct: 1   MSFSISSWQAYFADFGKFFQGFLFTLAISIGALTLALLLGIFFGAISTGKHKVLRGLARV 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++        P LV   + +   +  P++  +     + +   + +  + +  Y  A+I+
Sbjct: 61  FVEF--YQNTPLLVQFVIVF---YGLPLVSNY-----TIMPSIYWTAVLCVGLYHGAYIS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++RSG+ ++PRGQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +NL+KN+S   
Sbjct: 111 EVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVNLIKNTSTVA 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +   DL+ V  +        I        +Y  L   IA +  ++ 
Sbjct: 171 IISGMDLMFVTKSWSALNSNYIPAFAGAALLYFLLCFPIASWGRKVE 217



 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  ++   +  A ++G   GA     +K++  + RV+VE ++N P LV    +
Sbjct: 18  FFQGFLFTLAISIGALTLALLLGIFFGAISTGKHKVLRGLARVFVEFYQNTPLLVQFVIV 77

Query: 149 YKSVLSVLPIPDHSIVLP 166
           +  +  V        +  
Sbjct: 78  FYGLPLVSNYTIMPSIYW 95


>gi|325568891|ref|ZP_08145184.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325157929|gb|EGC70085.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 226

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 17/234 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             +    + L    L +    +     I V SF+ G +L +  T L         +    
Sbjct: 1   MYIPTLDLPLMWDSLPYLLSGLSYTVGIAVVSFLGGNLLGIMLTFLG-MLENPIIRGFVR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+S   + G+P LVL+ L Y               G         +  I  +  ++AFI
Sbjct: 60  GYLSF--LRGVPALVLLFLLY--------------FGLPYQLSALSAAIICFTLTSSAFI 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI R  +  V RGQ +AA ALGL+  K  RL++LPQA R  +P L++  ++LLK +SLA
Sbjct: 104 GEIYRGSIAGVDRGQFDAAYALGLSFTKTMRLIILPQAFRISVPALSNVAMDLLKGTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   D+      +  +T   + + ++   IY  L I+I     RL    + +
Sbjct: 164 AMITIPDIFQKAKIVGGRTFDYMSMYVLVAIIYWLLCILIEAGQKRLEQHFSKR 217


>gi|317403050|gb|EFV83587.1| glutamine transport system permease [Achromobacter xylosoxidans
           C54]
          Length = 218

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L    +      KI  +    G +L   +  ++R +       +  +Y+
Sbjct: 1   MDFDWNVVMEALPNLWVGTQMTIKITFWGLFGGFLLGALSG-VTRAYGHPILSGIAQVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+L        +       +  + L   + A+I+EI
Sbjct: 60  --AVIRGTPIVVQVMFIY---FALPLL-------ANIRVDAEWAAIVTLIINSGAYISEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L++V +G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK+SSL + +
Sbjct: 108 VRGSLLSVHKGLKEAGQAMGLPFHKILFHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  I+    +A+EI      +YL L+  +AL ++ +  ++ +
Sbjct: 168 GVAELTRQGQEIMASNFRAVEIWSAIAIVYLILTGTMALILHLVEKRMRI 217


>gi|261341267|ref|ZP_05969125.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316571|gb|EFC55509.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 224

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + ++GIV       +      +     PL +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLAITLKITVIAIIVGIVWGTLLAVM------RLSSFKPLAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +T  +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FATAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E++L    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMVLFAGGVYFVISLSASLLVSWLKKR 222



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  +    +I   + GTL+   RLS+ K +AW    YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLAITLKITVIAIIVGIVWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|260461849|ref|ZP_05810095.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785374|ref|YP_004144850.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032490|gb|EEW33755.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171262|gb|ADV14800.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 253

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 102/247 (41%), Gaps = 13/247 (5%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
            ++   L+ L          F               +  + ++ + S  +G+  ++    
Sbjct: 16  VIWYGCLAFLCFVGAWKAAGFRWAPIWPSAGLIAQGLWLSIQLSILSTAIGLAAAIPL-A 74

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R       +   +  I             + + + ++F  P +      G       +
Sbjct: 75  VARVHGSSFARIPAVFLIEIVRATPE-----LMVIFWVYFGAPAITGQPIDG-------W 122

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  +A+S   A+++AE++R+GL +V +GQ EAA + GL + ++ + ++LPQA+ +++P 
Sbjct: 123 TAALVAMSIIAASYLAEVIRAGLYSVDKGQWEAAASTGLNNWQSFKWIILPQAISNMMPA 182

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L SQ + L K +SL   VG  D         + T     I  +    Y  +   ++L + 
Sbjct: 183 LLSQVIMLFKTTSLVSMVGVIDFFRAAQITNSNTFSPYAIYTLVGIGYFIICGTLSLVVK 242

Query: 387 RLNAKIA 393
           R   +++
Sbjct: 243 RWRGRVS 249


>gi|261822384|ref|YP_003260490.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261606397|gb|ACX88883.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 224

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 10/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +    +T++      VF  V G +L++      R    K       LY++ F    
Sbjct: 13  MPYLIQGMVVTLEITLTAVVFGIVWGTILAVM-----RLSPIKPISWFAKLYVNLFRSVP 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV++ L + L    P L Q             +S  +A S + AA+ +EI+R+G+++
Sbjct: 68  ---LVMVLLWFYL--VVPSLLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGILS 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   +  AD   
Sbjct: 123 VSRGQSSAALALGMTHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFR 182

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              TI  + G  +E+IL   FIY   SI  ++ ++ L  +
Sbjct: 183 TASTIGERDGTQVEMILFAGFIYFLFSITASMLVSYLKKR 222



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 43/78 (55%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G V T  +  + ++   + GT++   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIGPSMPYLIQGMVVTLEITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLVVPSL 82


>gi|239816391|ref|YP_002945301.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802968|gb|ACS20035.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 217

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 18/224 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG       L     T+  +A  FV   +LG++++L      R       + +   +I  
Sbjct: 4   FGFPEFLFILEAAKWTLALSAIAFVGGAILGLIIALM-----RTSESAWARGVSTTFI-- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                      I     L     ++     + G  ++P +++  +AL   +AAF+ EI R
Sbjct: 57  ----------QIFQGTPLLLQLFLVFFGAPVLGLDINP-WVAAGVALILNSAAFLGEIWR 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+PRGQ EAA AL L +    R V+LPQA++  + P     + ++K +SLA  +GF
Sbjct: 106 GCIEAIPRGQWEAAQALNLKYAARMRDVVLPQALKIALAPTVGYVVQIIKGTSLAAIIGF 165

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++   G  + N T Q + +  +   IY ++   ++L   R+  
Sbjct: 166 VEVTRAGQVVNNATFQPLVVFSVVAAIYFAICWPLSLLAARMER 209


>gi|209516392|ref|ZP_03265248.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503154|gb|EEA03154.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 216

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 18/206 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +  F +GIV  +   RLSRH   +                     V       +  
Sbjct: 26  LTGLLIGFFVGIV--ICTARLSRHRAAR---------------LAGGAYVFFFRGVPMLV 68

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++       G  VSP  ++    +S  +A++IAEI+R G +++P G +EAA  LGL+
Sbjct: 69  QLLLVYYLLPFAGINVSPA-VAAISTVSLCSASYIAEILRGGFLSIPPGHLEAARMLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L+PQA R  +P L ++ + L+K SSL   VG A+L      I   T + +E 
Sbjct: 128 PLDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEA 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            +    IY  +   +AL  +    ++
Sbjct: 188 YVAAGLIYFVICGALALVAHAAEHRL 213


>gi|111225075|ref|YP_715869.1| glutamate permease [Frankia alni ACN14a]
 gi|111152607|emb|CAJ64348.1| Glutamate permease [Frankia alni ACN14a]
          Length = 305

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 20/255 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++   L +         +   V      L     +    T+       VF+ VLG+ L++
Sbjct: 34  LITLALLRLADHGQLDGELWSVFVDQPDLRTLLWNGLLDTLRAALTAMVFAVVLGVALAM 93

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              R+SRH   +          +T ++    +L ++ L    +   P L           
Sbjct: 94  A--RMSRHRAVRIP--------ATAVVELFRSLPVLMLILFAYLGLPAL--------GWK 135

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F +L + L+ Y  A I+EI R+G+ ++ RGQ EAA ALGL   +  RL+  PQA+R 
Sbjct: 136 LSAFWALVLGLTAYNGAVISEIFRAGIASIDRGQTEAAAALGLRPVQVFRLIQFPQAVRR 195

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIM 380
           + P L SQ + LLK++SL   + +++L+  G   +   G   A+ I      IY+  + +
Sbjct: 196 MSPTLISQLVTLLKDTSLGFVIAYSELLRSGRGAVEFLGSRYALPIYTAIAVIYIVTNSL 255

Query: 381 IALFMNRLNAKIALK 395
           ++     L+ +   +
Sbjct: 256 LSALARWLDRRQNRR 270



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 44/101 (43%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +    +       T +  G ++T   A + M+ A ++G  +   R+S ++ V       
Sbjct: 50  GELWSVFVDQPDLRTLLWNGLLDTLRAALTAMVFAVVLGVALAMARMSRHRAVRIPATAV 109

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VE+FR++P L++I F Y  + ++         L  G+   N
Sbjct: 110 VELFRSLPVLMLILFAYLGLPALGWKLSAFWALVLGLTAYN 150


>gi|27365436|ref|NP_760964.1| Arginine/ornithine ABC transporter permease AotQ [Vibrio vulnificus
           CMCP6]
 gi|37680521|ref|NP_935130.1| ABC-type arginine transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|320155822|ref|YP_004188201.1| arginine/ornithine ABC transporterpermease AotQ [Vibrio vulnificus
           MO6-24/O]
 gi|27361584|gb|AAO10491.1| Arginine/ornithine ABC transporter, permease protein AotQ [Vibrio
           vulnificus CMCP6]
 gi|37199269|dbj|BAC95101.1| ABC-type arginine transport system, permease component [Vibrio
           vulnificus YJ016]
 gi|319931134|gb|ADV85998.1| arginine/ornithine ABC transporter, permease protein AotQ [Vibrio
           vulnificus MO6-24/O]
          Length = 246

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    +  +A+  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARAIATLY--TTIIRGIPDLVLMMLIFFGGQIFLNNSLYAVNEWLNE 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFTSSDPTHEWVSYLPDYVDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   A R +LLPQ +R  +P   + +L LLK ++L   +G  D+V VG      T  
Sbjct: 152 YGMSSALAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVGALAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  L  K ++  +
Sbjct: 212 PFTFYMAVALIFLFFTSVSTGCLKVLERKFSIHTR 246



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G V T  +A   ++ A ++G L    +++  +    I  +Y  + R IP LV+
Sbjct: 7   YEASIFKGAVLTIEVALLSLVLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLVL 66

Query: 145 IF--------FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +         FL  S+ +V    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQIFLNNSLYAVNEWLNEWFTSSDPTHEWVSYLPDYVDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|238783036|ref|ZP_04627063.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia bercovieri ATCC 43970]
 gi|238716037|gb|EEQ08022.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia bercovieri ATCC 43970]
          Length = 245

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/230 (29%), Positives = 115/230 (50%), Gaps = 12/230 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE------KTGKALPLLYISTF 227
              S   LT+  +A   V S +LG +L+      +R             +  PLL    F
Sbjct: 18  WLWSGFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYSTLFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIV 285
             F    L+  +    L+       +   +G +   P  EF++ +I L+ Y+ AFIAE +
Sbjct: 78  WYFAASQLLPASWIPWLNSS----HEITLLGLTLNWPSFEFLAGFIGLTLYSTAFIAEEL 133

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSLA+A+G
Sbjct: 134 RAGISGVAKGQKYAAHALGLTGWQSMRHVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIG 193

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            A+L      +  +T +  +   +   +Y+++  +I  +      + A++
Sbjct: 194 VAELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQRTAIR 243



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 43/89 (48%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ +T++G L+ A R S N+ + W    Y  
Sbjct: 5   HLTDWLLAPQYLGWLWSGFLLTLWISACTVVASTLLGFLLAAARDSENRALQWFAMGYST 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +   +LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQLLPASWIPW 93


>gi|308187617|ref|YP_003931748.1| Histidine transport system, permease component [Pantoea vagans
           C9-1]
 gi|308058127|gb|ADO10299.1| Histidine transport system, permease component [Pantoea vagans
           C9-1]
          Length = 238

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 93/224 (41%), Gaps = 2/224 (0%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTF 227
           +    + L +      T   I ++  +L + +      L         + +   +++ T+
Sbjct: 5   IQEYWKSLLWTDGYRFTGVAITLWLLILSVTIGGCLAILLAIARVSPNRFISFPVWLFTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + + Y   +   ++     +  +          +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLVFYSGMYTLEIVKGTELL-NAFFRSGLNCTLLAFTLNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VP G++EAA A G +  K  R ++LP A+R+ +P  +++ + +L +++LA      
Sbjct: 124 AIRSVPHGEIEAARAYGFSTFKLYRCIILPSALRTALPVYSNEVILMLHSTALAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+ V   I + T Q      +   +YL +S ++         +
Sbjct: 184 DLLKVARDINSATYQPFTAFGLAAVLYLIISYVLISLFRLAERR 227


>gi|227327383|ref|ZP_03831407.1| glutamate/aspartate transport system permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 224

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +    +T+       VF  V G +L++      R    K       LY++ F    
Sbjct: 13  MPYLIQGMVVTLKITLTAVVFGIVWGTILAVM-----RLSPIKPISWFAKLYVNLFRSVP 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV++ L + L    P L Q             +S  +A S + AA+ +EI+R+G+++
Sbjct: 68  ---LVMVLLWFYL--VVPSLLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGILS 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   +  AD   
Sbjct: 123 VSRGQSSAALALGMTHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFR 182

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              TI  + G  +E+IL   FIY   SI  ++ ++ L  +
Sbjct: 183 TASTIGERDGTQVEMILFAGFIYFLFSITASMLVSYLKKR 222



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 43/78 (55%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G V T  +  + ++   + GT++   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIGPSMPYLIQGMVVTLKITLTAVVFGIVWGTILAVMRLSPIKPISWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLVVPSL 82


>gi|330820138|ref|YP_004349000.1| ABC-type amino acid transport system, permease component
           [Burkholderia gladioli BSR3]
 gi|327372133|gb|AEA63488.1| ABC-type amino acid transport system, permease component
           [Burkholderia gladioli BSR3]
          Length = 216

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F   + L    L       + + SFVL       A    R       +    LYI  F  
Sbjct: 4   FSFWQILDNLLLAARWTVVLSLVSFVL-GGALALALLAMRVSSNVALRGAVKLYIEIF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ I + +           F         P +++  + L+ +T+A++AEI R  +
Sbjct: 61  QGTPLLMQIFVVF-----------FGLPLAGLDVPPWVAATLGLTFFTSAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ EA+ +L +++ +  R V+LPQA R  + P     +  +K+++L   +GF +L
Sbjct: 110 EAVPRGQWEASASLAMSYLEQLRHVILPQAARIAVGPTVGFGVQAVKDTALVSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              G  I N T +   +  +   IY +L   +  +   L  K
Sbjct: 170 TRAGTVISNATFRPFLVYGLVALIYFALCYPLTRWARVLQRK 211



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 36/105 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    +    +   + A R+S+N  +    ++Y+E+F+  P L
Sbjct: 7   WQILDNLLLAARWTVVLSLVSFVLGGALALALLAMRVSSNVALRGAVKLYIEIFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + IF ++  +          +    G+                 A
Sbjct: 67  MQIFVVFFGLPLAGLDVPPWVAATLGLTFFTSAYLAEIWRGCVEA 111


>gi|109947816|ref|YP_665044.1| ABC-type amino-acid transport, permease component [Helicobacter
           acinonychis str. Sheeba]
 gi|109715037|emb|CAK00045.1| ABC-type amino-acid transport, permease component [Helicobacter
           acinonychis str. Sheeba]
          Length = 231

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 13/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F+    L IV++L      +    +   A    Y+S  +I G P LV I + + 
Sbjct: 35  PLAIISFILGLWLAIVVALIKIASPKRLIHRALLAGVNFYVS--IIRGTPLLVQIVVVF- 91

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L                +  IA S    A+ +E +R+  +++P+ Q +++++L
Sbjct: 92  --YGLPAL--------GVYIDPIPAGIIAFSLNVGAYASETLRASFLSIPKDQWDSSLSL 141

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL + +    V+  QA++   P L++ +++L K +SLA  V  A++  +     N +   
Sbjct: 142 GLNYLQTFWHVIFFQALKVATPSLSNTFISLFKETSLASVVTIAEIFRIAQQKANASYDF 201

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
           + I L    IY    + +      +  
Sbjct: 202 LPIYLEAALIYWLFCLALERIQKHVEK 228


>gi|89895379|ref|YP_518866.1| hypothetical protein DSY2633 [Desulfitobacterium hafniense Y51]
 gi|89334827|dbj|BAE84422.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 262

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 20/251 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I  +   +L VL    +S+     +       +           I  FS +L +++  F 
Sbjct: 25  IALVSAFMLGVLLWAFYSLDYTLRLDTVYLYRAKFIDGFLMTIIIAFFSLILSLIIGSFL 84

Query: 205 TRLSRHFHEKTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
               +       + LPL Y       +I G P LV I + + +                 
Sbjct: 85  AFAGK------SRFLPLHYFSKAYVEIIRGTPLLVQIYVFFYI-----------IATAMH 127

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +S  ++   I LS ++ A+I EI+R+G+ ++   Q+E A +LG T  +  R +++PQ  +
Sbjct: 128 LSNRYVLGVIILSVFSGAYICEIIRAGIESIEASQIETARSLGFTSYQRYRYIIIPQVFK 187

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PPL  Q ++L+K+SSL   +  ++L      + + T    E  ++   +Y+ L++ I
Sbjct: 188 RILPPLAGQLVSLIKDSSLLSVIAVSELTKNVQEVDSFTFATFENYIVLALLYMILTVPI 247

Query: 382 ALFMNRLNAKI 392
           +     L  K 
Sbjct: 248 SYASKVLERKF 258



 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 37/77 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + GF+ T  +AF  +I + IIG+ +     S    + +  + YVE+ R  P LV 
Sbjct: 55  YRAKFIDGFLMTIIIAFFSLILSLIIGSFLAFAGKSRFLPLHYFSKAYVEIIRGTPLLVQ 114

Query: 145 IFFLYKSVLSVLPIPDH 161
           I+  +  + + + + + 
Sbjct: 115 IYVFFYIIATAMHLSNR 131


>gi|229028441|ref|ZP_04184563.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
 gi|228732890|gb|EEL83750.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1271]
          Length = 214

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/217 (28%), Positives = 110/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             ++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEVGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++  V
Sbjct: 68  LLIIFFTYFALPEV 81


>gi|329998469|ref|ZP_08303106.1| arginine ABC transporter permease protein ArtM [Klebsiella sp. MS
           92-3]
 gi|328538659|gb|EGF64755.1| arginine ABC transporter permease protein ArtM [Klebsiella sp. MS
           92-3]
          Length = 222

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 104/224 (46%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S ++ ++LSL  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIIVALILSLIFTII---LTLKTPGLVWIVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++ ++      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSLQEYPWLWHLISEP-WLCALIALSLNSAAYTTQLFYGAIRAIPD 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCSALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGQGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGIIYLIVNGLLTLLMRLVERKALAFERR 221



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +I A I+  +           + WI R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIIVALILSLIFTIILTLKTPGLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           IF +Y        + ++  + 
Sbjct: 64  IFLIYYGPGQFPSLQEYPWLW 84


>gi|315124397|ref|YP_004066401.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315018119|gb|ADT66212.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 247

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 121/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V+ +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVVSYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++      R    KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAIL-----RFSKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+   F+Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGFVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +   R S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|260461178|ref|ZP_05809427.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033212|gb|EEW34474.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 230

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 1/174 (0%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +  G P LV I L Y          Q   +      P +    IALS  TAA+ +EI
Sbjct: 57  FVAVFRGTPLLVQIFLIYYGLGQFRPTLQSVGLWWLFREP-YWCAIIALSLNTAAYGSEI 115

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  VPRG +EAA A G+T  +  RLV+LP A+R  IP  +++ + ++K +SLA  V
Sbjct: 116 LRGAIQGVPRGLVEAASAFGMTRLQTLRLVVLPLALRQAIPSYSNEIILMVKGTSLASIV 175

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++  +   +I+QT +AIE+ +    IYL+++  I   +N L   +     +
Sbjct: 176 TLMEVTGIAQGLISQTYRAIEVFVAAGAIYLTINFTIISALNALETWLTPYRVR 229



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA   +     +  L+   +   ++++ W  R +V VFR  P LV IF +
Sbjct: 14  LLSGLPLTLQLAGLSIGIGFALALLLALAQQGNHRMLVWPIRSFVAVFRGTPLLVQIFLI 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  +    P      +           +   +L         +   + G+   L     +
Sbjct: 74  YYGLGQFRPTLQSVGLWWLFREPYWCAIIALSLNTAAYGSEILRGAIQGVPRGLVEAASA 133


>gi|116671680|ref|YP_832613.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116611789|gb|ABK04513.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 263

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 19/263 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L V   ++   ++ L +      +   +F   +          +  K  +    LG ++ 
Sbjct: 13  LYVQAGIFVVAVAALVLATDWKTIGTSVFNFAKIGPMFPDIFFSGLKNTLIYTALGFIVG 72

Query: 202 LFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           L    L    +       + L   YI  F       LV IA  Y +     V      + 
Sbjct: 73  LSGGLLLALMKLSSFPLYRWLATGYIEFFRGIPA-LLVFIAFGYGVPLAFGVQWNVTIV- 130

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                     + I+L    AA+IAE +R+GL AVP+GQ+EAA +LG+   +A   +++PQ
Sbjct: 131 ----------VMISLGMVAAAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVSIVIPQ 180

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIY 374
           A R ++PPLT++ + L K+SSL   +G      +L   G   I+  G  +  +L+    Y
Sbjct: 181 AFRIVLPPLTNEVILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFY 240

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L ++I ++L   +  ++ A  ++
Sbjct: 241 LVITIPLSLLARKFESRSARTKR 263



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 30/79 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G  NT      G I     G L+   +LS+  L  W+   Y+E FR IP L+V    
Sbjct: 54  FFSGLKNTLIYTALGFIVGLSGGLLLALMKLSSFPLYRWLATGYIEFFRGIPALLVFIAF 113

Query: 149 YKSVLSVLPIPDHSIVLPF 167
              V     +  +  ++  
Sbjct: 114 GYGVPLAFGVQWNVTIVVM 132


>gi|294637497|ref|ZP_06715783.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella
           tarda ATCC 23685]
 gi|291089329|gb|EFE21890.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella
           tarda ATCC 23685]
          Length = 225

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    +I V + ++GI+       + R    K       LY
Sbjct: 1   MYQFDWSSIVPSLPYLLDGMVITLQITVTAVIVGILWGTCL-AVMRLSRWKPLAWFAALY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A + + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSLLQQVLGLSPKQDIRLISAMVAFALFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V RGQ  AA+ALG+T  ++  LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIKSVARGQNAAALALGMTSWQSMYLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD      TI  + G  +E+IL   FIY  +S+  +L +N L  + A+
Sbjct: 175 LSLADFFRTASTIGERDGTQLEMILFAGFIYFIISLSASLLVNHLKKRSAV 225



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + +I   + GT +   RLS  K +AW   +YV +FR++P ++V+ +
Sbjct: 15  YLLDGMVITLQITVTAVIVGILWGTCLAVMRLSRWKPLAWFAALYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVLSV 155
            Y  V S+
Sbjct: 75  FYLVVPSL 82


>gi|239833819|ref|ZP_04682147.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821882|gb|EEQ93451.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 240

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 92/240 (38%), Gaps = 2/240 (0%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                 L    F  +       +    +  + V  F+LG  + +FA   ++    +T + 
Sbjct: 1   MKQMGFLDILSFGPDGWGYVLMMGALVSVALAVLGFLLGAAIGVFA-AWAKISGGRTLRT 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +   Y +T +      LV+    +        +G++    G    P F++  +A+     
Sbjct: 60  VADGY-TTIIRGIPDLLVIYLFYFGGSAAVTAIGKYFGAEGFVGFPGFLAGVLAIGISCG 118

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A   E+ R    AV +G++EAA A G+      R ++ P A+R  +P L + +   LK S
Sbjct: 119 AHHTEVFRGAYRAVFKGEIEAATACGMGRMLKFRRIIAPLALRHALPGLGNVWQVSLKES 178

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L    G  +L+         TG      LI   +YL +S +    +       +   ++
Sbjct: 179 ALVSVAGVVELLRQAQIGAGSTGLPFNFFLIAGALYLLISSVSGGLLQLAERHFSRGVRR 238


>gi|183598117|ref|ZP_02959610.1| hypothetical protein PROSTU_01482 [Providencia stuartii ATCC 25827]
 gi|188020276|gb|EDU58316.1| hypothetical protein PROSTU_01482 [Providencia stuartii ATCC 25827]
          Length = 226

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 6/229 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F          F    +   AKI + + V+GI+       + R    K       L
Sbjct: 1   MFYEFDWSSIAPSWPFLLDGLVVTAKITITAIVVGILWGTVL-AVMRLSTFKPISWFAAL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++TF       LV++ L + L    P L Q             +S  +A S + AA+ +
Sbjct: 60  YVNTFRSIP---LVMVLLWFYL--IVPNLVQNVLGISPKSDIRLISAMVAFSLFEAAYYS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++ RGQ  AA+ALG+TH +  RLV+LPQA +++IP L +Q + L ++SSL  
Sbjct: 115 EIIRAGIQSISRGQASAALALGMTHMQTMRLVILPQAFKAMIPLLLTQGIVLFQDSSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   D       I  + G  +E+IL   F+Y  +S   ++ +N L  +
Sbjct: 175 VLSLTDFFRTATNIGERDGTQVEMILFAGFVYFIISFGASMLVNYLKKR 223



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 43/81 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S +     +L G V T  +  + ++   + GT++   RLS  K ++W   +YV  FR
Sbjct: 6   DWSSIAPSWPFLLDGLVVTAKITITAIVVGILWGTVLAVMRLSTFKPISWFAALYVNTFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           +IP ++V+ + Y  V +++  
Sbjct: 66  SIPLVMVLLWFYLIVPNLVQN 86


>gi|171059367|ref|YP_001791716.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|171060692|ref|YP_001793041.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170776812|gb|ACB34951.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
 gi|170778137|gb|ACB36276.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 221

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 6/210 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           AK F+FS  L +V  +    L            P L + +         V + +     F
Sbjct: 18  AKGFIFSIQLTLVAMIGGILLGTLLALMRLSGKPWLVLPSAAYVNTMRSVPLVMVILWFF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L     +G        +S  +  + + AA+ +EI+R+G+ +VPRGQ+ A  A+G+T
Sbjct: 78  LLIPLLIGRPMGAE------LSAIVTFTLFEAAYYSEIMRAGIQSVPRGQVHAGYAVGMT 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R+  +LV+LPQA R+++P L +Q + L +++SL  A+G  DL+           + +E 
Sbjct: 132 YRQTMQLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDLLKGFEVAGKNFNRPVET 191

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            L+   +Y  +   +++ + RL  KIA+  
Sbjct: 192 YLVAAVVYFVICFGLSMLVRRLQKKIAIIR 221



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 38/81 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +    A+ I  GF+ +  L    MI   ++GTL+   RLS    +      YV   R+
Sbjct: 7   FLNWDIVASFIAKGFIFSIQLTLVAMIGGILLGTLLALMRLSGKPWLVLPSAAYVNTMRS 66

Query: 139 IPPLVVIFFLYKSVLSVLPIP 159
           +P ++VI + +  +  ++  P
Sbjct: 67  VPLVMVILWFFLLIPLLIGRP 87


>gi|291616874|ref|YP_003519616.1| ArtM [Pantoea ananatis LMG 20103]
 gi|291151904|gb|ADD76488.1| ArtM [Pantoea ananatis LMG 20103]
 gi|327393300|dbj|BAK10722.1| arginine transport system permease protein ArtM [Pantoea ananatis
           AJ13355]
          Length = 222

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 86/185 (46%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT    PL+     L  G P LV I L Y      P L    ++      P ++   +AL
Sbjct: 40  KTPLFSPLVKGFITLFTGTPLLVQIFLIYYGPGQFPSLQTLPWLWHLLSQP-WLCAMLAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  +AA+  ++    + A+P GQ ++  ALG+T R+    +LLP A +  +   +++ + 
Sbjct: 99  SLNSAAYTTQLFYGAVRAIPAGQWQSCEALGMTPRQTL-RILLPYAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K +SLA  +   +++  G  +  +T   + +      IYL ++ ++ + M  +  +  
Sbjct: 158 VFKGTSLAFTITLMEVMGHGQLLYGRTYD-VTVYAAAGLIYLCVNGLLTIMMRLIEKRAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 AFERR 221


>gi|295680983|ref|YP_003609557.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295440878|gb|ADG20046.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 229

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 3/215 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S      L L     ++    +    +  +Y  T LI  +P LVL+ L + 
Sbjct: 15  WVTIKLAVLSLAASFALGLLGAA-AKLSTNRVLSRIGTMY--TTLIRAVPDLVLMLLLFY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F         F++  I L     A+  E  R   ++VPRGQ+EA  A 
Sbjct: 72  SIQIWLNELTDMFSMEQIDIDPFLAGVITLGFIYGAYFTETFRGAFLSVPRGQIEAGFAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++ R+    +L PQ MR  +P + + +  L+K ++L   +G AD+V         T   
Sbjct: 132 GISARRVFTRILFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTQSF 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L    IYL+++ +  L + RL  + ++  ++
Sbjct: 192 FFFTLATGAIYLAITTISNLVLIRLEKRYSIGVRR 226


>gi|227888781|ref|ZP_04006586.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|227850618|gb|EEJ60704.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
          Length = 224

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 15/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L           +IF ++ V+ I L L    ++   H K      +L    ++I 
Sbjct: 14  YIFSILPSLFSGAWLTIEIFFWTTVVSIPLGLL---VAFGLHSKLKLVKAILKFYVWIIR 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   +                   V P + +  +A     AA+ AEI R GL 
Sbjct: 71  GTPLLLQLIFIFY-----------GLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQ 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ EAA  LGL+  +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+
Sbjct: 120 AVPVGQFEAAQVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLL 179

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G     +    +  +++   +YL+++ ++   +  +  +
Sbjct: 180 RAGNVATARDVSLVP-LVLVGCVYLAMTAVLTALLRVVEKR 219



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   ++  G   T  + F   + +  +G LV  G  S  KLV  I + YV + R  P L+
Sbjct: 17  SILPSLFSGAWLTIEIFFWTTVVSIPLGLLVAFGLHSKLKLVKAILKFYVWIIRGTPLLL 76

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            + F++  + +V  +            +N              A   
Sbjct: 77  QLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPV 123


>gi|86152052|ref|ZP_01070264.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|121612320|ref|YP_001000576.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157415158|ref|YP_001482414.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005508|ref|ZP_02271266.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85840837|gb|EAQ58087.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|87249317|gb|EAQ72277.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|157386122|gb|ABV52437.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747801|gb|ADN91071.1| Putative amino-acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315932617|gb|EFV11548.1| Amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 247

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 120/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V+ +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVVSYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++      R    KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAIL-----RFSKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +   R S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|15596087|ref|NP_249581.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PAO1]
 gi|107100348|ref|ZP_01364266.1| hypothetical protein PaerPA_01001373 [Pseudomonas aeruginosa PACS2]
 gi|116048814|ref|YP_792386.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218893141|ref|YP_002442010.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           LESB58]
 gi|254239243|ref|ZP_04932566.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           C3719]
 gi|254245177|ref|ZP_04938499.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           2192]
 gi|296390756|ref|ZP_06880231.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PAb1]
 gi|313105773|ref|ZP_07792036.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           39016]
 gi|9946790|gb|AAG04279.1|AE004523_7 arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           PAO1]
 gi|2668597|gb|AAC71072.1| membrane protein [Pseudomonas aeruginosa PAO1]
 gi|115584035|gb|ABJ10050.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126171174|gb|EAZ56685.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           C3719]
 gi|126198555|gb|EAZ62618.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           2192]
 gi|218773369|emb|CAW29181.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           LESB58]
 gi|310878538|gb|EFQ37132.1| arginine/ornithine transport protein AotM [Pseudomonas aeruginosa
           39016]
          Length = 232

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  F +  ++  L F  L +            L + + L   R+S+             
Sbjct: 1   MIFDFSVIWDSLPLYFDGLLVTLKLLSISLLIGLLLAVPLALMRVSKQPLVNFP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEILAGSLKATPHGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+ +Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLVDITGAARTVYSQYYLPFEAFITAGLFYLCLTFILVRLFKLAERR 222


>gi|238750306|ref|ZP_04611808.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia rohdei ATCC 43380]
 gi|238711539|gb|EEQ03755.1| Binding-protein-dependent transport system inner membrane component
           [Yersinia rohdei ATCC 43380]
          Length = 203

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 2/194 (1%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L   R     +    +  PLL    F  F    L+  +    L  + P    +  +  S 
Sbjct: 10  LKMLRGFAIGYSTLFRNTPLLIQLFFWYFAASQLLPASWIPWL--NTPHEINWFGVNLSW 67

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
            S EF++ +I L+ Y+ AFIAE +R+G+  V +GQ  AA ALGLT  ++ R V+LPQA++
Sbjct: 68  PSFEFLAGFIGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALK 127

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +PPL  QY+N++KNSSL +A+G A+L      +  +T +  +   +   +Y+++  +I
Sbjct: 128 IALPPLLGQYMNIIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATLLYIAIIALI 187

Query: 382 ALFMNRLNAKIALK 395
             +      + A++
Sbjct: 188 EAWGMWRQQRTAIR 201



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++ A R S  K++      Y  +FRN P L+ +FF Y +   +LP      +        
Sbjct: 1   MLAAARDSELKMLRGFAIGYSTLFRNTPLLIQLFFWYFAASQLLPASWIPWLN------T 54

Query: 173 NRGLSFPTLTMDTNAKIFVFSFV 195
              +++  + +   +  F+  F+
Sbjct: 55  PHEINWFGVNLSWPSFEFLAGFI 77


>gi|254489588|ref|ZP_05102790.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           GAI101]
 gi|214041758|gb|EEB82399.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           GAI101]
          Length = 231

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 5/211 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   +F+LG +++L    L+     +  +     +I  F I G P LV + + Y 
Sbjct: 18  WLTLLITFCAFLLGQIVALPLALLA-RARSRLLRWPVKTWI--FFIRGSPLLVQLFIIYF 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +   +   N +    +        +A+   + A+ AE++R GL  +P GQ+EAA  L
Sbjct: 75  GMGEVDAIR--NSVFWPILREPLNCAILAVGLNSGAYSAELLRGGLRQIPVGQLEAARVL 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A   + LPQ  R+++P   ++ + ++K S+LA AV   ++       +++T   
Sbjct: 133 GMSGFHALTRITLPQVYRNVLPVTGNEIILVMKGSALASAVTVMEMTGAARAFVSKTYAP 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E+  +   IYL + + ++     +    A+
Sbjct: 193 FEVFTVAGIIYLVIGLALSQLFRGIERATAI 223


>gi|209521572|ref|ZP_03270271.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209497983|gb|EDZ98139.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 229

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +A+   Y  T LI  +P LVL+ L +                       F++
Sbjct: 39  KLSFNRPLRAIATGY--TTLIRSVPDLVLMLLLFYSIQMAVNDVTDALDLPQFDIDPFVA 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + 
Sbjct: 97  GVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGMRVFTRILFPQMMRFALPGIG 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T      IL+   IYL+++ +  + +  L
Sbjct: 157 NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFILVAALIYLAITTVSNVALIWL 216

Query: 389 NAKIALKEKK 398
           N + ++  + 
Sbjct: 217 NRRYSIGVRH 226


>gi|107021747|ref|YP_620074.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116688693|ref|YP_834316.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170731990|ref|YP_001763937.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|254246321|ref|ZP_04939642.1| ABC-type arginine transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|105891936|gb|ABF75101.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia cenocepacia
           AU 1054]
 gi|116646782|gb|ABK07423.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Burkholderia cenocepacia
           HI2424]
 gi|124871097|gb|EAY62813.1| ABC-type arginine transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|169815232|gb|ACA89815.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 246

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLAAIGTVYVSIF--RNIPLIVQFFVWYLVIPELLPASIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMAFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK +A I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  +  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVIPELLPASIGTWI 101


>gi|171316138|ref|ZP_02905363.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171098742|gb|EDT43536.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 216

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F   + L+   L       + + SF L   L      + R  + +  +    LYI  F  
Sbjct: 4   FTFAQILANLLLAARWTVVLSIVSF-LSGGLVGLGLLVMRVSNSRVLRGCAKLYIEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +   F  P++              +++    L+ +T+A++AEI R  +
Sbjct: 61  QGTPLLMQLFVVF---FGLPLI--------GLDVSPWVAATAGLTFFTSAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP+GQ EA+ +L +++ +  R V+LPQA R  I P     +  +K+++L   +GF +L
Sbjct: 110 EAVPKGQWEASASLAMSYVEQLRHVILPQAARIAIAPTVGFGVQAVKDTALVSIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             VG  I N T +   +  +   IY +L   +  +   L  +
Sbjct: 170 TKVGVAISNATFRPFVVYGLVALIYFALCYPLTRYARTLQRR 211



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+    T  L+    +   ++G  +   R+S ++++    ++Y+EVF+  P L+ +F +
Sbjct: 13  LLLAARWTVVLSIVSFLSGGLVGLGLLVMRVSNSRVLRGCAKLYIEVFQGTPLLMQLFVV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  +  +       +    G+                 A
Sbjct: 73  FFGLPLIGLDVSPWVAATAGLTFFTSAYLAEIWRGCVEA 111


>gi|146310838|ref|YP_001175912.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145317714|gb|ABP59861.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 225

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + V+GIV       + R    K        Y
Sbjct: 1   MYEFDWSSIVPSMPYLLDGLLITLKITVIAIVIGIVWGTIL-AVMRLSSFKPFAWFATAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNVFRSIP---LVMVLLWFYL--IVPGLLQNVLGLSPKADIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y ++S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFAISLSASLLVSWLKKR 222



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 35/66 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T  +    ++   + GT++   RLS+ K  AW    YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLLITLKITVIAIVIGIVWGTILAVMRLSSFKPFAWFATAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|157803317|ref|YP_001491866.1| succinate dehydrogenase flavoprotein subunit [Rickettsia canadensis
           str. McKiel]
 gi|157784580|gb|ABV73081.1| succinate dehydrogenase flavoprotein subunit [Rickettsia canadensis
           str. McKiel]
          Length = 218

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 13/228 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      + F         K  V + + G+V+ +    + +       +     Y 
Sbjct: 1   MFEYLIKFYPKILFIVEGTLVTLKYSVIAVIFGLVIGMLL-AICKVNKNYALRFFANFYT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L+ +++ Y   F  P +    F         F +  I+ S  + A+++E+
Sbjct: 60  SIF--RGTPLLIQLSIIY---FASPYIVGIKF-------SVFTAGAISFSLNSGAYVSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AV +GQ EAA AL +      + ++LPQA+++I P L ++ ++L+K S++   +
Sbjct: 108 IRAGINAVDKGQFEAAEALAIPRYLIMQDIILPQAVKNIFPSLVNELVSLIKESAIISML 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+     +  +T      +LI    Y  L ++I+     +  K+
Sbjct: 168 GEIDLMRRAQIVSIETYNYFFPMLIAACCYYILVMLISFIAKIIEKKM 215



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G + T   +   +I   +IG L+   +++ N  + +    Y  +FR  P L+ +  +
Sbjct: 15  IVEGTLVTLKYSVIAVIFGLVIGMLLAICKVNKNYALRFFANFYTSIFRGTPLLIQLSII 74

Query: 149 YKSVL 153
           Y +  
Sbjct: 75  YFASP 79


>gi|33597552|ref|NP_885195.1| glutamine ABC transporter permease protein [Bordetella
           parapertussis 12822]
 gi|33573980|emb|CAE38299.1| glutamine transport system permease protein [Bordetella
           parapertussis]
          Length = 219

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    L           KI  +  V G V+      ++R +       L  +Y+
Sbjct: 1   MDFDWSVIGTALPNLLDGTLMTVKITFWGLVGGFVVGALIG-VARAYGPLWLAGLAQVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P++ +              +    L   + A+IAEI
Sbjct: 60  --AVIRGTPIVVQVMFIY---FALPLMIE------GMRVDVVAAAIATLIINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L++V +G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK+SSL + +
Sbjct: 109 VRGSLLSVHKGLKEAGQAMGLPFYKILLYIIGPVAFRRMIPPLGNQCIISLKDSSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  I+    +A+EI      +YL L+  +AL +  L  ++ +
Sbjct: 169 GVAELTRQGQEIMASNFRAVEIWSAVAIVYLILTGTMALGLRMLEKRMRI 218



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F G++   ++G L+G  R      +A + +VYV V R  P +V + F+
Sbjct: 15  LLDGTLMTVKITFWGLVGGFVVGALIGVARAYGPLWLAGLAQVYVAVIRGTPIVVQVMFI 74

Query: 149 YKSVLSV 155
           Y ++  +
Sbjct: 75  YFALPLM 81


>gi|160933930|ref|ZP_02081317.1| hypothetical protein CLOLEP_02792 [Clostridium leptum DSM 753]
 gi|156866603|gb|EDO59975.1| hypothetical protein CLOLEP_02792 [Clostridium leptum DSM 753]
          Length = 213

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 101/222 (45%), Gaps = 18/222 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L    +T+       VF+  LG+++SL      R    K       L+I   ++ G P 
Sbjct: 10  MLQGTLMTLRIFFSTLVFALPLGLLVSL-----GRMSKIKIINWPVRLFI--LIMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ +   +              + G  +    ++  +A +   AA+ AEI R G+ ++P 
Sbjct: 63  MLQLLFVFY---------GLKPLFGIQLD-RVIAAQVAFALNYAAYFAEIYRGGIESIPD 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG   ++    ++LPQ ++ IIPP+ ++++ L+K++SLA  +   +L+ V  
Sbjct: 113 GQYEAAKVLGFNKKQTFFRIILPQVVKRIIPPMGNEFITLVKDTSLAQVIAVVELLKVTN 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++ +  ++   +I    YL ++ ++         +++   
Sbjct: 173 NWVS-SAVSMVPFVIAAVFYLVMNGVVTRCFTIAEKRLSYYR 213



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 37/64 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + FS ++ A  +G LV  GR+S  K++ W  R+++ + R  P ++ + F+
Sbjct: 10  MLQGTLMTLRIFFSTLVFALPLGLLVSLGRMSKIKIINWPVRLFILIMRGTPLMLQLLFV 69

Query: 149 YKSV 152
           +  +
Sbjct: 70  FYGL 73


>gi|88800985|ref|ZP_01116535.1| ABC-type arginine transport system, permease component [Reinekea
           sp. MED297]
 gi|88776252|gb|EAR07477.1| ABC-type arginine transport system, permease component [Reinekea
           sp. MED297]
          Length = 235

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 10/212 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   S VL   L L    + +    +    +   Y  T +I G+P LV + L Y  
Sbjct: 17  LTMELAALSLVLAFTLGLLG-AMGKLSKNRMANGVATTY--TTIIRGVPDLVWMMLLYFG 73

Query: 245 -------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
                   FD         I       EF+S  + +     A++ E  R   +AV  GQ+
Sbjct: 74  GQIMVNAFFDWLYNATDGQIDIFFPFNEFLSGVLTIGFIFGAYMTETFRGAFMAVDAGQI 133

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA  A G++  +  R +  PQ MR  +P + + +  LLK ++L   +G AD+V +     
Sbjct: 134 EAGKAYGMSSWQIFRRISFPQMMRHALPGIANNWQVLLKTTALVSIIGLADMVRLATEAA 193

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             TG+  +  +    +YL ++ +  +   +LN
Sbjct: 194 KSTGEPFKFFIPVAIVYLGIAALSDVLFKKLN 225



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 1/109 (0%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  G + T  LA   ++ A  +G L   G+LS N++   +   Y  + R +P LV 
Sbjct: 7   YGPGIFKGAILTMELAALSLVLAFTLGLLGAMGKLSKNRMANGVATTYTTIIRGVPDLVW 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +  LY     ++       +        +    F           F+F 
Sbjct: 67  MMLLYFGG-QIMVNAFFDWLYNATDGQIDIFFPFNEFLSGVLTIGFIFG 114


>gi|294794720|ref|ZP_06759855.1| amino acid ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|313894094|ref|ZP_07827660.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|294454082|gb|EFG22456.1| amino acid ABC transporter, permease protein [Veillonella sp.
           3_1_44]
 gi|313441658|gb|EFR60084.1| ABC transporter, permease protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 238

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +    +        +     I V S +LG++L      + R         L +++IS
Sbjct: 4   YFDVSYMIQAFPQLLNYVHVTVLITVISAILGVILGSII-AIIRLKKVPVLNQLFIVFIS 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV + L Y   F  P +     +    V P  + +Y   + + AA+ AEI+
Sbjct: 63  F--MRGTPFLVQLFLIY---FGVPEIMSHMGLNMKNV-PGLVFVYAVFTLHIAAYSAEIM 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RS + AV  G+ EAA +LG+T  ++   ++LPQA    IPPLT+  + +LK ++L   VG
Sbjct: 117 RSSIDAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D++     +   + + +E+ +    IY  L I+++L    L  +  +  K+
Sbjct: 177 VVDMMRKADLMGGNSQRYLELFVDAAIIYGILIIIVSLLGRLLEKRFTVAGKE 229



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +     I   I+G+++   RL    ++  +  V++   R  P LV +F +Y  V  +
Sbjct: 24  TVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVFISFMRGTPFLVQLFLIYFGVPEI 83

Query: 156 LPIPDHSIVLPFGMFL 171
           +     ++    G+  
Sbjct: 84  MSHMGLNMKNVPGLVF 99


>gi|221198891|ref|ZP_03571936.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD2M]
 gi|221205151|ref|ZP_03578167.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD2]
 gi|221174942|gb|EEE07373.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD2]
 gi|221181342|gb|EEE13744.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD2M]
          Length = 257

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 16/212 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +    IYL L+ ++   +  L  +++   +
Sbjct: 197 VFVCAAVIYLGLNFIVVRLLGALEWRLSAHLR 228



 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L     T  L F+ ++   ++  ++   R+S + L     R Y+ VFR  P L+ +
Sbjct: 12  LRQLLAAVPTTLGLFFASLVLGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQM 71

Query: 146 FFLYKSVLSVLPIPDHSIVL 165
           F +Y  +     I +  +  
Sbjct: 72  FLVYYGLGQFGVIRESFMWP 91


>gi|119964343|ref|YP_948457.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119951202|gb|ABM10113.1| putative amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opine family [Arthrobacter aurescens
           TC1]
          Length = 254

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 103/237 (43%), Gaps = 15/237 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                  +         + +     + V S ++G  L +    L         + +  +Y
Sbjct: 10  TFFDWEAMGEVIPKMFAVGLPNTIVLAVVSGIIGTALGMLL-ALMGISRNAAARWVARIY 68

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                       VL  L     F  P++ +    G ++  P       ALS  + A+I E
Sbjct: 69  TDILRGLPP---VLTILVIGFGFG-PIIRELT--GSTSPYPM---AIAALSLMSGAYIGE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I RSG+ +V +GQ+EA  ALG ++  + RLV++PQ +R ++P L +Q++ L+K SSL   
Sbjct: 120 IFRSGIQSVDKGQLEATRALGFSYGSSMRLVVVPQGIRRVLPALVNQFIALIKESSLVFM 179

Query: 344 VGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G      ++  +G      +G  +   +     YL+L+I +  F+N ++A++    
Sbjct: 180 LGLLATEREIFQIGKDAAANSGN-LSPYVAAAIFYLALTIPLTHFVNWIDARMRAGR 235



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             VG  NT  LA    I  T +G L+    +S N    W+ R+Y ++ R +PP++ I  +
Sbjct: 25  FAVGLPNTIVLAVVSGIIGTALGMLLALMGISRNAAARWVARIYTDILRGLPPVLTILVI 84

Query: 149 YKSV 152
               
Sbjct: 85  GFGF 88


>gi|19745969|ref|NP_607105.1| putative ABC transporter (permease) [Streptococcus pyogenes
           MGAS8232]
 gi|19748129|gb|AAL97604.1| putative ABC transporter (permease) [Streptococcus pyogenes
           MGAS8232]
          Length = 216

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 8/178 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +   L Y+    I  +  + +I + + L+F  P              P  +  Y+  S  
Sbjct: 46  RQPLLHYLVRTYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMV 97

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+I+E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K
Sbjct: 98  SAAYISEVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVK 157

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +SSLA  +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 158 SSSLAAMITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|115350619|ref|YP_772458.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115280607|gb|ABI86124.1| L-glutamate ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Burkholderia ambifaria
           AMMD]
          Length = 246

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSAIGTIYVSIF--RNVPLIVQFFIWYLVVPELLPASVGTWIKQLPPTTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPTGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            +YV +FRN+P +V  F  Y  V  +LP    + +
Sbjct: 67  TIYVSIFRNVPLIVQFFIWYLVVPELLPASVGTWI 101


>gi|288922650|ref|ZP_06416826.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EUN1f]
 gi|288346008|gb|EFC80361.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EUN1f]
          Length = 285

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 20/240 (8%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            PD   +      L          T+   A   VF+  LG+ L+            +   
Sbjct: 46  DPDIWRIFIDEPDLRTLLWEGLLDTLRAAATGMVFAVALGVALAFA----------RLST 95

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              +   +  L+  L  L L+ L +      P L              F +L + L+ Y 
Sbjct: 96  RPAVHVPAAALVETLRGLPLLMLIFFAFLGLPAL--------GVDLSAFWALVLGLTAYN 147

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A ++EI R+G++++ RGQ EAA ALGL   +   L+  PQA+R + P L SQ + LLK+
Sbjct: 148 GAVLSEIFRAGVLSIDRGQTEAAAALGLRGTQIFALIQFPQAVRRMSPTLVSQLVTLLKD 207

Query: 338 SSLAVAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SL   +G+ +L+  G   +   G   A+ I      IY+ ++  ++L    L  + +++
Sbjct: 208 TSLGFVIGYTELLRQGRGAVEVLGSRYALPIYTTLAVIYIIVNGSLSLTARWLERRQSVR 267



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G ++T   A +GM+ A  +G  +   RLS    V       VE  R +P L++IFF 
Sbjct: 63  LWEGLLDTLRAAATGMVFAVALGVALAFARLSTRPAVHVPAAALVETLRGLPLLMLIFFA 122

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + ++         L  G+   N
Sbjct: 123 FLGLPALGVDLSAFWALVLGLTAYN 147


>gi|162448163|ref|YP_001621295.1| ABC transporter permease [Acholeplasma laidlawii PG-8A]
 gi|161986270|gb|ABX81919.1| ABC-type transport system, permease component [Acholeplasma
           laidlawii PG-8A]
          Length = 218

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 103/223 (46%), Gaps = 13/223 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      L++          +F+F+  L I L L    + +   +   K + L    T++
Sbjct: 1   MDYFIDVLTYLLEGSKITLLVFIFTL-LSIPLGLIFAVIRKISIQPIVKLIDL---YTWI 56

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P L+ +   + + +  P+L      G + +  E             A+  EI R G
Sbjct: 57  IRGTPLLLQL---FFVVYGLPIL-----FGPAFLFDELYGAIFTFIINYTAYFIEIFRGG 108

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+ +GQ +A+ A+ L+  +  R ++LPQ +   +P + ++ + L+K+++L  AV  +D
Sbjct: 109 MNAIHKGQYDASKAIHLSPYQTYRHIILPQTLHKTLPSIGNELITLIKDTALVSAVSISD 168

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++     ++N+  + +E  ++   IYL  + +I +   ++  +
Sbjct: 169 ILRNSRELVNRDFR-VESYMVAAVIYLLFTYVIVMLFKKIETR 210


>gi|170741748|ref|YP_001770403.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196022|gb|ACA17969.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 217

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 14/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + S V+  VL L    + R    ++      L+I+  +I G+P +V +   Y 
Sbjct: 20  QLTILITLGSLVVSTVLGLV-WAMMRVSGVRSLAFASALFIN--VIRGIPIIVQLFYIY- 75

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F             +  + L    +A+ AE  R+ + A+  GQ+EAA  +
Sbjct: 76  ----------FVLPDFGIALTAVQAGVLGLGLAYSAYHAENFRAAIEAIDGGQIEAAQTI 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      R V+LPQA+R  +PP  +  + +LK+SS A  +  A+L   G  I + T + 
Sbjct: 126 GMGWGLTMRRVVLPQALRIALPPYGNVMIMMLKDSSQASTITVAELALQGKLIASATFKN 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +  +   +YL+LS+ + L +     +   +
Sbjct: 186 TSVFTLVALMYLALSLPLILIVRHTEKRAGRR 217



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +T++G +    R+S  + +A+   +++ V R IP +V +F++
Sbjct: 15  LLQGVQLTILITLGSLVVSTVLGLVWAMMRVSGVRSLAFASALFINVIRGIPIIVQLFYI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +               G+ L               A 
Sbjct: 75  YFVLPDFGIALTAVQAGVLGLGLAYSAYHAENFRAAIEAI 114


>gi|260575379|ref|ZP_05843378.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022299|gb|EEW25596.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 259

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 113/241 (46%), Gaps = 19/241 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
                      +    G  +    L     T+   A   V + V+ ++ ++      R  
Sbjct: 22  DWQWARAFGFVLRWQDGTPVPGPLLIGLGQTLRIAALAGVIALVIALITAIL-----RLS 76

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           +  +G+ L   Y+   +I   P +V I++ Y              I        F +  +
Sbjct: 77  NSISGRWLARAYVE--VIRNTPLIVQISMFY------------FAIAPLLGIERFWAGVL 122

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+ + AAF++EI+R+G++ V   Q EAA +LGLT  +  RL++LPQA+R+++PPLTS  
Sbjct: 123 ALALFEAAFLSEIIRAGILGVALTQWEAAASLGLTRPQTYRLIVLPQALRAMLPPLTSSA 182

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + L+ +SS+   +  A+L + G   I     + EI  +   +YL++++ ++ F  RL  +
Sbjct: 183 VALVMDSSIVSVIALAELTTAGRNAIADNFLSFEIWFLVAGLYLTITLTLSAFARRLERR 242

Query: 392 I 392
            
Sbjct: 243 Y 243



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 1/192 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   T  +A    + A +I  +    RLS +    W+ R YVEV RN P +V I   
Sbjct: 45  LLIGLGQTLRIAALAGVIALVIALITAILRLSNSISGRWLARAYVEVIRNTPLIVQISMF 104

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS-LFATRL 207
           Y ++  +L I      +          LS           +  +     + L+     RL
Sbjct: 105 YFAIAPLLGIERFWAGVLALALFEAAFLSEIIRAGILGVALTQWEAAASLGLTRPQTYRL 164

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                       PL   +  L+     + +IAL       +  +               +
Sbjct: 165 IVLPQALRAMLPPLTSSAVALVMDSSIVSVIALAELTTAGRNAIADNFLSFEIWFLVAGL 224

Query: 268 SLYIALSCYTAA 279
            L I L+    A
Sbjct: 225 YLTITLTLSAFA 236


>gi|238788678|ref|ZP_04632470.1| Histidine transport system permease protein hisM [Yersinia
           frederiksenii ATCC 33641]
 gi|238723273|gb|EEQ14921.1| Histidine transport system permease protein hisM [Yersinia
           frederiksenii ATCC 33641]
          Length = 212

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 86/209 (41%), Gaps = 8/209 (3%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       V   +L I L++      R             ++ T++  G P  V + + Y
Sbjct: 1   MWLLISSVVMGGMLAIPLAVARVAERRWIRLPV-------WVFTYIFRGTPLYVQLLVFY 53

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +   ++   + +  +          +AL+  T A+  EI    + +VP G++EAA A
Sbjct: 54  SGVYSLEIIRGNDLL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 112

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G +  K  R ++LP A+R  +P  +++ + +L +++LA      D++ +   I   T Q
Sbjct: 113 YGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 172

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I   +YL +S  +     +   +
Sbjct: 173 PFYAFGIAAVLYLIISFTLISLFRQAEKR 201


>gi|315292092|gb|EFU51444.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
          Length = 224

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPPLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|304395668|ref|ZP_07377551.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304356962|gb|EFM21326.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 246

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK-IFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   ++ +F +G    +  T  +R     
Sbjct: 5   WNWGIFLEQAPFGNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRLLSTI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+    F     P LV   L      +     QF           F+S
Sbjct: 65  GTCYVELFRNIPLIVQFFFWYLVAPELVGENLGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++++I L M+ +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVAINLVIMLLMSLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 65/183 (35%), Gaps = 17/183 (9%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
            +    G   E+A F           +++Y   +  GF  T  ++    I A  +G+  G
Sbjct: 2   GIDWNWGIFLEQAPFG----------NTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
             R   N+L++ I   YVE+FRNIP +V  FF Y     ++        L          
Sbjct: 52  ILRTVPNRLLSTIGTCYVELFRNIPLIVQFFFWYLVAPELVGE-----NLGMWFKSELDP 106

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS--RHFHEKTGKALPLLYISTFLIFGLP 233
                L+      +F  + V   V +   +  S  ++     G  LP  Y    L     
Sbjct: 107 NIQFFLSSMICLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYR 166

Query: 234 TLV 236
            +V
Sbjct: 167 VIV 169


>gi|295395634|ref|ZP_06805826.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971450|gb|EFG47333.1| His/Glu/Gln/Arg/opine family amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 264

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 21/215 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  FVF+ +LG +L+L      +       + +   YI  F       LV IA  + +  
Sbjct: 66  ALGFVFAMLLGNILALM-----KISSVAPYRWIATAYIEFFR-GVPALLVFIAFGFGIPA 119

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                        S     ++++ +AL    +A+IAE +R+GL AVP+GQ EAA +LG++
Sbjct: 120 AF-----------SINLNTYVTVMLALGIVESAYIAETLRAGLQAVPKGQYEAARSLGMS 168

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   +++PQAMR I+PPLT++ + + K+SSL   +G +    +L   G   I     
Sbjct: 169 HSRAMFTIVVPQAMRIILPPLTNEIIIMTKDSSLIYLLGLSAVQFELALFGKNAIAAPSA 228

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +++    YL +++ +     +  ++ A + K
Sbjct: 229 GLTPLVVAGACYLVITLPLGWLARKFESRQAKERK 263



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   I     NT      G + A ++G ++   ++S+     WI   Y+E FR +P 
Sbjct: 47  AQQFPLVITTALKNTIIYTALGFVFAMLLGNILALMKISSVAPYRWIATAYIEFFRGVPA 106

Query: 142 LVVIFFLYKSVLSVL 156
           L+V       + +  
Sbjct: 107 LLVFIAFGFGIPAAF 121


>gi|293596721|ref|ZP_06684318.1| amino acid ABC transporter [Listeria monocytogenes J2818]
 gi|293591776|gb|EFG00111.1| amino acid ABC transporter [Listeria monocytogenes J2818]
          Length = 221

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 112/234 (47%), Gaps = 19/234 (8%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               ++ + M +    L     T+   A   V S  LG V+++           K     
Sbjct: 4   KERRIMDYIMEILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNIS-------KIAPLK 56

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            +L I  +++ G P L+ +   Y   +  P++          V     +++IA     AA
Sbjct: 57  FILNIYIWIMRGTPLLLQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAA 105

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SS
Sbjct: 106 YFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSS 165

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 166 LVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQLEKRFS 218



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 15  ILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 75  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 103


>gi|238752606|ref|ZP_04614079.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia rohdei ATCC 43380]
 gi|238709197|gb|EEQ01442.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia rohdei ATCC 43380]
          Length = 246

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWIWAGFQVTVALSLCAWVIAFLIGSLFGILRTVPNRILSGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+ + +      +     QF           F+S
Sbjct: 65  GACYVELFRNVPLIVQFFTWYLVVPELLPVDIGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A +IG+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIWAGFQVTVALSLCAWVIAFLIGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP
Sbjct: 53  LRTVPNRILSGIGACYVELFRNVPLIVQFFTWYLVVPELLP 93


>gi|330830031|ref|YP_004392983.1| amino acid ABC transporter permease [Aeromonas veronii B565]
 gi|328805167|gb|AEB50366.1| ABC-type amino acid transporter, permease protein [Aeromonas
           veronii B565]
          Length = 265

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/277 (23%), Positives = 115/277 (41%), Gaps = 19/277 (6%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
             RL+  +L+ W+    +     +  L+       +           ++   G +     
Sbjct: 1   MARLNRPRLLGWLSGTVM-----LSALLGWALYSGARQMGYEWQWPRVLPFLGEWDEGTF 55

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            + P L             +LG +         R    + G  L + Y    L+   P L
Sbjct: 56  YAGPLLNGLLVTLQVALLSLLGTMAVGVCVVSLRLLPSRLGPWLAIAY--LALVRTTPQL 113

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y L            +G            ++LS Y  AF AE++R+G+ A+P+G
Sbjct: 114 VQLYILYFL------------LGPMLGLAPLACAVLSLSLYQGAFTAEVLRAGVQAIPKG 161

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGL+     R V+LPQ +R  +PPLT++ ++L+K+S+L   +   DL + G T
Sbjct: 162 QWEAAQSLGLSRAITLRKVILPQLVRITLPPLTNELVSLIKHSALVSVIAIFDLTNEGRT 221

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++  T    E+      +YL L++ ++     L   +
Sbjct: 222 LVADTFLTFEVWFTVATLYLLLTLTLSACSRALARHL 258



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 36/75 (48%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +  +   + YA  +L G + T  +A   ++    +G  V + RL  ++L  W+   Y+ +
Sbjct: 47  LGEWDEGTFYAGPLLNGLLVTLQVALLSLLGTMAVGVCVVSLRLLPSRLGPWLAIAYLAL 106

Query: 136 FRNIPPLVVIFFLYK 150
            R  P LV ++ LY 
Sbjct: 107 VRTTPQLVQLYILYF 121


>gi|270260985|ref|ZP_06189258.1| transporter [Serratia odorifera 4Rx13]
 gi|270044469|gb|EFA17560.1| transporter [Serratia odorifera 4Rx13]
          Length = 219

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 97/188 (51%), Gaps = 11/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R +         L++I   +I G P +V +   Y   F  P+               F
Sbjct: 42  FARTYGGWLANHAALVFIE--VIRGTPIVVQVMFIY---FALPMAF------SDLRIDPF 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R+  R V++P A+R ++PP
Sbjct: 91  SAAVVTIMINSGAYIAEITRGAVLSIHNGFREAGLALGLSRRETIRYVIMPLALRRMLPP 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL ++++++  + 
Sbjct: 151 LGNQWIISIKDTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVIYLIITLVLSFVLR 210

Query: 387 RLNAKIAL 394
           RL  ++ +
Sbjct: 211 RLERRMKI 218


>gi|262368884|ref|ZP_06062213.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
 gi|262316562|gb|EEY97600.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
          Length = 247

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 9/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L             +  + VLG +L +      R    KT +++   Y++ F    +P
Sbjct: 24  WILIGLGWLFVIAIVAWSIAMVLGSILGIM-----RTLPNKTARSIGTGYVTIF--RNVP 76

Query: 234 TLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            L+ + + + +  +F    +  +     S  +   +S  I L  +TAA + E VR+G+ A
Sbjct: 77  LLIQLFIWFYVVPNFLPGPIKSWWINDLSAGTTALISASIGLGLFTAARVCEQVRTGIEA 136

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+ A  A+G +  +  R V+LPQ+ R+I+PPL+S+  N +KN+S+A  VG ++++S
Sbjct: 137 LPTGQVNAGYAMGFSTAQLYRYVILPQSFRTILPPLSSELTNCVKNTSVASLVGVSEIIS 196

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              TI   T   IEI      I++ +++ +   M  L  ++ +
Sbjct: 197 QMKTISEYTQNTIEIYTYVTIIFIVINVCLITLMTLLEKRLRV 239



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           DS+Y + IL+G    F +A      A ++G+++G  R   NK    I   YV +FRN+P 
Sbjct: 18  DSTYLSWILIGLGWLFVIAIVAWSIAMVLGSILGIMRTLPNKTARSIGTGYVTIFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L+ +F  +  V + LP P  S  +  
Sbjct: 78  LIQLFIWFYVVPNFLPGPIKSWWIND 103


>gi|238785202|ref|ZP_04629194.1| Histidine transport system permease protein hisM [Yersinia
           bercovieri ATCC 43970]
 gi|238713880|gb|EEQ05900.1| Histidine transport system permease protein hisM [Yersinia
           bercovieri ATCC 43970]
          Length = 216

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 4/209 (1%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M     + + S V+G +L++    ++R    +  +    ++I T++  G P  V + + Y
Sbjct: 1   MAVTLWLLISSVVMGGLLAIPL-AVARVAERRWIRLP--VWIFTYIFRGTPLYVQLLVFY 57

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +   ++   + +  +          +AL+  T A+  EI    + +VP G++EAA A
Sbjct: 58  SGMYSLEIIRGNDLL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 116

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G +  K  R ++LP A+R  +P  +++ + +L +++LA      D++ +   I   T Q
Sbjct: 117 YGFSRFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 176

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I   +YL +S  +     +   +
Sbjct: 177 PFYAFGIAAVLYLIISFTLISLFRQAEKR 205


>gi|227114973|ref|ZP_03828629.1| glutamate/aspartate transport system permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 224

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +    +T+       VF  + G +L++      R    K       LY++ F    
Sbjct: 13  MPYLIQGMVVTLKITLTAVVFGIIWGTILAVM-----RLSPIKPISWFAKLYVNLFRSVP 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV++ L + L    P L Q             +S  +A S + AA+ +EI+R+G+++
Sbjct: 68  ---LVMVLLWFYL--VVPSLLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGILS 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   +  AD   
Sbjct: 123 VSRGQSSAALALGMTHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFR 182

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              TI  + G  +E+IL   FIY   SI  ++ ++ L  +
Sbjct: 183 TASTIGERDGTQVEMILFAGFIYFLFSITASMLVSYLKKR 222



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 43/78 (55%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G V T  +  + ++   I GT++   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIGPSMPYLIQGMVVTLKITLTAVVFGIIWGTILAVMRLSPIKPISWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLVVPSL 82


>gi|84385570|ref|ZP_00988601.1| arginine ABC transporter, permease protein [Vibrio splendidus
           12B01]
 gi|84379550|gb|EAP96402.1| arginine ABC transporter, permease protein [Vibrio splendidus
           12B01]
          Length = 228

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 1/179 (0%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + + + + +T  +  +  L  I +   ++F       F   G       F+S  +ALS  
Sbjct: 42  RRIAIKWPTTAFVTIVRGLPEILVVLFIYFGS-TQVLFMITGDFIEVSPFLSGVVALSLI 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            A++ ++ +R  L AV +GQ EAA ALG++  ++   ++LPQA+R  +P LT+Q+L LLK
Sbjct: 101 FASYASQTIRGALKAVSKGQREAASALGISQLRSFFRIVLPQAVRHALPGLTNQWLVLLK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++L   +G  DL+         T +A         IYL ++++    +  ++ K +++
Sbjct: 161 DTALVSLIGVTDLLKQAQLTSAATHEAFTWYATAAAIYLVITLITQRLVKVIDGKFSIQ 219


>gi|297579917|ref|ZP_06941844.1| amino acid ABC transporter [Vibrio cholerae RC385]
 gi|297535563|gb|EFH74397.1| amino acid ABC transporter [Vibrio cholerae RC385]
          Length = 298

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALP-LLYIS 225
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L+++ 
Sbjct: 63  PYFLQGLVATLRLSLWGMVLALVLGSLIGIARSHKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H  +         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P GQ EAA +LGL++    R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPPGQWEAADSLGLSNWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 13/189 (6%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R     +   L L +  +  W          +S + +   +    A       ++    
Sbjct: 10  SRYRFTLLDGGLLLAIASLIGWLYY-------RSEVGIHYHWHWREA-----WTLIFTPR 57

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                   L G V T  L+  GM+ A ++G+L+G  R      V      +V++ RNIPP
Sbjct: 58  ADGSLPYFLQGLVATLRLSLWGMVLALVLGSLIGIARSHKAWFVRLPANAFVQLVRNIPP 117

Query: 142 LVVIFFLYKSVL-SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           LV +F  Y  +   ++P+     +L       +  +++          +      +G++ 
Sbjct: 118 LVFVFIFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLS 177

Query: 201 SLFATRLSR 209
           S +   + R
Sbjct: 178 SAYIAEIVR 186


>gi|302060016|ref|ZP_07251557.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
          Length = 231

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 3/181 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +            +     F +  
Sbjct: 41  KTSPYKPLQWLGGTYSTLVRGIPELLWVLLIYFGTVNGMRALGEWLGIPNLALSAFAAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGLCFGAYATEVFRGEILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++ L+K+++L   +G  +++      +  T +A    ++   +YL L+++  + M  L  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKEAFTFYMVAAIMYLGLTVLAMIGMYFLEK 220

Query: 391 K 391
            
Sbjct: 221 H 221


>gi|218709050|ref|YP_002416671.1| histidine transport system permease HisQ [Vibrio splendidus LGP32]
 gi|218322069|emb|CAV18140.1| Histidine transport system permease protein hisQ [Vibrio splendidus
           LGP32]
          Length = 246

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 23/233 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-- 242
              ++ + S +L +VL      L++    +  +A+  LY  T +I G+P LVL+ L +  
Sbjct: 17  LTIEVALLSLILAMVLG-MLGALAKLAPYRWARAIATLY--TTVIRGIPDLVLMMLIFFG 73

Query: 243 ------------------QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                                   P      ++        F++  + +     A++AE 
Sbjct: 74  GQILLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIFGAYMAET 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++AV  G+MEAA A G+    A R +LLPQ +R  +P   + +L LLK ++L   +
Sbjct: 134 FRGAIMAVDSGEMEAAKAYGMGPVLAFRRILLPQMIRHALPGFGNNWLVLLKTTALVSII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G  D+V V       T       +    I+L  + +    +  +  K ++  +
Sbjct: 194 GLEDMVRVSALAAGSTKMPFTFYMTVAIIFLFFTSVSTGLLKLVERKFSIHAR 246



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G V T  +A   +I A ++G L    +L+  +    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGAVLTIEVALLSLILAMVLGMLGALAKLAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINEWLNEWFTSSDPNHEWTAYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|315181774|gb|ADT88687.1| arginine ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 229

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 4/170 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I GLP L+++   Y        L   +FI  S     F+S  IALS   A++ A+ +
Sbjct: 54  VMVIRGLPELLVVLFIYFGSTQVLFLITGDFIEIS----PFISGVIALSLIFASYAAQTL 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L AV RGQ EAA ALG+   +A   ++LPQA+R  +P L +Q+L LLK+++L   +G
Sbjct: 110 RGALKAVGRGQREAASALGIPPGRAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIG 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             DL+         T +A         +YL ++++    +  ++ K A++
Sbjct: 170 VTDLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDKKFAVQ 219


>gi|15890240|ref|NP_355912.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158430|gb|AAK88697.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 230

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 18/199 (9%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            VLG+V +L      +     T        +    +   P LV +   Y       VL +
Sbjct: 42  LVLGLVFALLRRSRVKLISWPTA-------VVVEFLRDTPLLVQLFFLYY------VLPE 88

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F  +      P F++  +AL    AA+ +E+ R G+ AV  GQ EAA AL LT  +  R 
Sbjct: 89  FGIV-----LPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATALNLTRMQTYRD 143

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQA+  I+P + +  + ++K + +   V   +++ +   I  +T + +  + +   I
Sbjct: 144 IIIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFEYLVPLTLVGLI 203

Query: 374 YLSLSIMIALFMNRLNAKI 392
           +L L+I+ +  ++RL   +
Sbjct: 204 FLLLTIICSAGLSRLQRAL 222



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 35/74 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    IL+G   T   A +G   A ++G +    R S  KL++W   V VE  R+ P LV
Sbjct: 18  SILPIILIGLTVTLKAAAAGFAIALVLGLVFALLRRSRVKLISWPTAVVVEFLRDTPLLV 77

Query: 144 VIFFLYKSVLSVLP 157
            +FFLY  +     
Sbjct: 78  QLFFLYYVLPEFGI 91


>gi|38347925|ref|NP_941174.1| glutamine ABC transporter permease protein [Serratia marcescens]
 gi|152973763|ref|YP_001338802.1| glutamine ABC transporter permease protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|38259402|emb|CAE51629.1| membrane transport system permease protein [Serratia marcescens]
 gi|150958545|gb|ABR80572.1| hypothetical protein KPN_pKPN5p08192 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 218

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +     I +     G ++ L A  + R       K L L+++
Sbjct: 1   MNFETKYIWESLPLLLQGLQLTILISMVGLAGGFIIGLLAG-ICRALGGGIAKTLSLIFV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI G P +V +   Y   F  P++                +  + +   + A+IAEI
Sbjct: 60  E--LIRGTPIMVQVMFIY---FALPMI-------LPVRIDPITAAMVTIIINSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ RG  EA++A+GL+ R     V++P A+R +IP L +Q++  +K++SL + +
Sbjct: 108 TRGAILSINRGFKEASLAMGLSQRATLWHVIMPLALRRMIPALGNQWIISIKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  II    +A+E+      IYL++++ ++  + +L  +I +
Sbjct: 168 GVAELTRQGQEIIAGNFRALEVWTAVALIYLAVTLCLSFLLKQLEKRIHI 217


>gi|262404014|ref|ZP_06080569.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
 gi|262349046|gb|EEY98184.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
          Length = 279

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 16/266 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  L       +  + ++ +  +       ++    GL            + +   ++GI
Sbjct: 24  VALLAYEKTPKRGWIWLVFVNIYPFFAAILLYGGVFGLEVVETHKWGGLLVTLIIALVGI 83

Query: 199 VLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           ++SL    A  L R       ++L  +YI  +    L T++ +A           +    
Sbjct: 84  IVSLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMA----------SVMLPL 133

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   +   + +   I +  ++AA++AE++R GL A+P+GQ EAA ALGL++ K   L++
Sbjct: 134 FLSEGSEINKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLII 193

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMF 372
           LPQA++  IP + + ++ L K++SL + +G  D++ +G +     N  G A E  +    
Sbjct: 194 LPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVAL 253

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  K+    K+
Sbjct: 254 VFWVFCFGMSRYSIWLEGKLHTGHKR 279



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G+I +  IG  +  GR S   ++  +C VY+EV+R +P + V+F     
Sbjct: 71  GLLVTLIIALVGIIVSLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 130

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   L        L   +       +     +       +    +     + LS +    
Sbjct: 131 LPLFLSEGSEINKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMG 190

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +     +P +  +   +F   +LVLI   +  L   +      N++G +T S  F
Sbjct: 191 LIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVF 250

Query: 267 MSLYIALSCYTAAFIA 282
           ++L   + C+  +  +
Sbjct: 251 VALVFWVFCFGMSRYS 266


>gi|170721102|ref|YP_001748790.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169759105|gb|ACA72421.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 215

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F  G +  L    ++R       + L   YI  F  
Sbjct: 3   FTFWDILRNLLIGLQWTLLLSLVAFFFGGLAGLLVL-VARIAQWPWLRGLARGYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F           +M+  IAL+ +T+AF+AEI R  +
Sbjct: 60  QGTPLLMQLFMVF-----------FGIALFGLDVSAWMAAAIALTLFTSAFLAEIWRGCV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P GQ EA+ +L L+  +  R V+LPQA+R  + P     + ++K +++   +GF +L
Sbjct: 109 ESIPNGQWEASGSLALSRMEQLRHVILPQALRIAVAPTVGFSVQVVKGTAVTSIIGFTEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              GG + N T +   +  +    Y  L   ++L    L  ++
Sbjct: 169 TKTGGMLANATFEPFMVYGLVALGYFILCYPLSLSARYLERRL 211



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 35/106 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+        + G LV   R++    +  + R Y+E+F+  P L
Sbjct: 6   WDILRNLLIGLQWTLLLSLVAFFFGGLAGLLVLVARIAQWPWLRGLARGYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + +F ++  +          +     + L               + 
Sbjct: 66  MQLFMVFFGIALFGLDVSAWMAAAIALTLFTSAFLAEIWRGCVESI 111


>gi|116248756|ref|YP_764597.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|241113599|ref|YP_002973434.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|115253406|emb|CAK11794.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|240861807|gb|ACS59473.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L       + + SF+ G V+ L    L R    K  + +   YI  F  
Sbjct: 4   FTLWDILRNLLLATRWTILLSLVSFIGGGVVGLGLLFL-RISKRKAFRTVAKYYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +           F         P +++   AL  ++AAF+AEI R  +
Sbjct: 61  QGTPLLMQLFIAF-----------FGLGLFGIDVPAWLAAGFALILWSAAFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV +GQ EA+ +LG+   +  R V+LPQA+R  IPP     + ++K ++L   +GF +L
Sbjct: 110 EAVVKGQWEASASLGMGRLQQMRYVILPQALRVAIPPTVGFSVQIVKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  + N T Q   +  +   IY +L   ++     L  K+ +  +
Sbjct: 170 SKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHR 217



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 37/107 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+    I   ++G  +   R+S  K    + + Y+E+F+  P L
Sbjct: 7   WDILRNLLLATRWTILLSLVSFIGGGVVGLGLLFLRISKRKAFRTVAKYYIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F  +  +          +   F + L +             A +
Sbjct: 67  MQLFIAFFGLGLFGIDVPAWLAAGFALILWSAAFLAEIWRGCVEAVV 113


>gi|239820511|ref|YP_002947696.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805364|gb|ACS22430.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 223

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 17/189 (8%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R + + +    + +P L I   + FG    +       +  D                  
Sbjct: 48  RAAGNGYAAVVRGIPDLLIVFAVFFGGSLTLAALTGRYVEIDT----------------- 90

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++   AL+    A+ AEI R  L+AVP+ Q EAA  LGL+  +A   V+LPQA R  + 
Sbjct: 91  FLAGVAALALSFGAYAAEIARGALLAVPKTQREAARTLGLSRAQALWTVVLPQAARFALA 150

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P  +Q + LLK +S+   VG  +L+         T +   + L    IYL+L+    L +
Sbjct: 151 PFGNQSIVLLKQTSIVSIVGCDELMRKAAEASGATREPFTMYLAAACIYLALTGFATLCL 210

Query: 386 NRLNAKIAL 394
                + A 
Sbjct: 211 EWAERRAAR 219


>gi|190894714|ref|YP_001985007.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700375|gb|ACE94457.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 219

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M + +  L+          ++ V    L +V++  A  L R       +AL   YI  F 
Sbjct: 1   MSVWSGYLTLILEGALVTLQLTVMGSALALVMAFLAG-LGRLSRFFAVRALATAYIEFF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   Y           F             +  +AL     A+ AE+VR  
Sbjct: 59  -RGTSIFVQLFWVY-----------FVLPFAGVTLTPLQAGVLALGLNVGAYGAEVVRGA 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV R Q EA +AL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D
Sbjct: 107 VKAVGREQSEACVALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +      +  QTG  +      + +Y  +++ I+  M RL  ++A  
Sbjct: 167 MTFQAQVVRAQTGNTLVPFATILILYFLMALAISAAMRRLERRMARG 213



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 3/142 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL G + T  L   G   A ++  L G GRLS    V  +   Y+E FR     V 
Sbjct: 7   YLTLILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F++Y  +                + LN        +     A     S      ++L  
Sbjct: 67  LFWVYFVLPFAGVTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC---VALNL 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
           +R  R  H    +ALPL+  + 
Sbjct: 124 SRYQRMRHVILPQALPLMLPTF 145


>gi|2961078|gb|AAC05642.1| unknown [Pseudomonas marginalis pv. alfalfae]
          Length = 365

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 16/267 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            + PL +  F  K+V  +  +  + I+  F +     GL+    +      + +    +G
Sbjct: 109 GVAPLFISRFPRKAVYGLSFLVLYPIIAYFLLHGGIFGLTNVATSQWGGLMLTLVIATVG 168

Query: 198 IVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           I  +L       L R  +    + + + +I  +    L T VL      L    P     
Sbjct: 169 IAGALPLGIVLALGRRSNMPAIRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMGI 227

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +         + +   I +  + +A++AE+VR GL A+P+GQ EAA A+GL + ++  LV
Sbjct: 228 D---------KLLRALIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLV 278

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWM 371
           +LPQA++ +IP + + ++ L K++SL + +G  DL++            G A E  +   
Sbjct: 279 ILPQALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAA 338

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++      ++ +   L  K+    K+
Sbjct: 339 LVFWIFCFGMSRYSIHLEHKLDTGHKR 365


>gi|22124842|ref|NP_668265.1| ABC transporter permease [Yersinia pestis KIM 10]
 gi|45440529|ref|NP_992068.1| putative amino acid ABC transporter permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108808737|ref|YP_652653.1| putative amino acid ABC transporter permease [Yersinia pestis
           Antiqua]
 gi|108811006|ref|YP_646773.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Nepal516]
 gi|145600150|ref|YP_001164226.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Pestoides F]
 gi|149364904|ref|ZP_01886939.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CA88-4125]
 gi|162420579|ref|YP_001607783.1| amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926615|ref|ZP_02222447.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165935981|ref|ZP_02224551.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166010969|ref|ZP_02231867.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166213024|ref|ZP_02239059.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399700|ref|ZP_02305224.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421515|ref|ZP_02313268.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423383|ref|ZP_02315136.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167468794|ref|ZP_02333498.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|218930280|ref|YP_002348155.1| putative amino acid ABC transporter permease [Yersinia pestis CO92]
 gi|229838866|ref|ZP_04459025.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229896359|ref|ZP_04511528.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Pestoides A]
 gi|229899435|ref|ZP_04514578.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229901225|ref|ZP_04516347.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Nepal516]
 gi|270489413|ref|ZP_06206487.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504971|ref|YP_003569033.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Z176003]
 gi|21957671|gb|AAM84516.1|AE013696_9 putative permease of ABC transporter [Yersinia pestis KIM 10]
 gi|45435386|gb|AAS60945.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|108774654|gb|ABG17173.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Nepal516]
 gi|108780650|gb|ABG14708.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Antiqua]
 gi|115348891|emb|CAL21848.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CO92]
 gi|145211846|gb|ABP41253.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Pestoides F]
 gi|149291317|gb|EDM41391.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CA88-4125]
 gi|162353394|gb|ABX87342.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Angola]
 gi|165916126|gb|EDR34733.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165921543|gb|EDR38740.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989969|gb|EDR42270.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166205811|gb|EDR50291.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960434|gb|EDR56455.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167052204|gb|EDR63612.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057553|gb|EDR67299.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|229681154|gb|EEO77248.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Nepal516]
 gi|229687837|gb|EEO79910.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229695232|gb|EEO85279.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700635|gb|EEO88665.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Pestoides A]
 gi|262363035|gb|ACY59756.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis D106004]
 gi|262366959|gb|ACY63516.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis D182038]
 gi|270337917|gb|EFA48694.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355430|gb|ADE65771.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Z176003]
 gi|320016444|gb|ADW00016.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 217

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   +    L       + + +F  G +++L    L R  H +    +  LY   F  
Sbjct: 3   FTDWDIIRNLLLAARWTLLLSLTAFFGGTLVTLPLM-LMRLSHWRWAARVVRLYTELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+AF+ +I    +
Sbjct: 60  QGTPLLMQLFLAF-----------FGLALFGIDVSPWTAAAMALTLFTSAFLVDIWCGSI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+  LGL+  +    V+ PQAMR  I P     + ++K ++LA  +GF +L
Sbjct: 109 AALPKGQWEASRCLGLSFHQTLFRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ + + L  K 
Sbjct: 169 TKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSRYSHYLEKKF 211



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 33/88 (37%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +     T++   +   RLS  +  A + R+Y E+F+  P 
Sbjct: 5   DWDIIRNLLLAARWTLLLSLTAFFGGTLVTLPLMLMRLSHWRWAARVVRLYTELFQGTPL 64

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L+ +F  +  +                +
Sbjct: 65  LMQLFLAFFGLALFGIDVSPWTAAAMAL 92


>gi|293381613|ref|ZP_06627597.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|290921797|gb|EFD98815.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
          Length = 217

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFV+G++L L      ++     G    
Sbjct: 2   ETFIHAYSWVDIRFLLQGLWVTIYVSLISIALSFVVGLILGLVRYMKIKYVSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+    +   AL  +  A 
Sbjct: 58  ------FIIDIIRNLPLLLIIFFTYFGLPQL--------GIVTNPTTASIAALVIFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ +V  GQME A + G+++ +A   V++PQA+ ++IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIGSVDSGQMEGARSNGMSYVQAMYHVIMPQALHNMIPALLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   ++   N L  K 
Sbjct: 164 ATIIVLPELLYHAQIIYSQNTTYLIPMYVIIAIMYFIVCFCLSTIANYLQKKY 216



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 36/71 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R    K V+ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLVRYMKIKYVSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|258545834|ref|ZP_05706068.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258518850|gb|EEV87709.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 231

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 97/215 (45%), Gaps = 8/215 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +   S ++G+ +++    L         K   + +  +++  G P LV + + Y 
Sbjct: 19  WQTLWLVALSLLIGLTIAIPCGMLLSSRCAIWWKLPVMAF--SYIFRGTPMLVQLYIFY- 75

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
            +    V+G+   +    + P     +  + ++    TAA+ AEIVR  +   P+G++EA
Sbjct: 76  -YGIGLVIGRIPGVRELALWPLLRQAWPWVMLSFILNTAAYTAEIVRGAIETTPKGEIEA 134

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALG+  R+    ++LP A R  +P   ++ + +L  S++A      D+  V  T+  +
Sbjct: 135 AKALGMNRRQIQWRIILPGAARRALPAYGNEIIFMLHGSAIASTATLLDITGVANTLYTR 194

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           T +     L    IYL++++ I     R+  ++  
Sbjct: 195 TYEPFAPFLTAAVIYLAITLCIVGIFRRIEKRLNR 229


>gi|161525882|ref|YP_001580894.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189349396|ref|YP_001945024.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221202316|ref|ZP_03575350.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD2M]
 gi|221209130|ref|ZP_03582124.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD2]
 gi|221214521|ref|ZP_03587492.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD1]
 gi|160343311|gb|ABX16397.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189333418|dbj|BAG42488.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221165778|gb|EED98253.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD1]
 gi|221171034|gb|EEE03487.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD2]
 gi|221177890|gb|EEE10303.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Burkholderia multivorans CGD2M]
          Length = 246

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLAAIGTVYVSIF--RNIPLIVQFFIWYLVVPELLPASIGTWIKQLPPGTQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPKGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVLINLVVMGLMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK +A I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLAAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFIWYLVVPELLPASIGTWI 101


>gi|16262712|ref|NP_435505.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|307312874|ref|ZP_07592503.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|14523338|gb|AAK64917.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306899388|gb|EFN30021.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 232

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 1/216 (0%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                 L   T AK+FV S +L ++  L     ++    +   A+   Y   F       
Sbjct: 7   WWDDYLLASVTVAKVFVCSLILMVIFGLLGAS-AKLSSNRLANAVGNAYTVFFRGTPEIL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++L+           +   F+        P F +  IA++    ++  E  R     V  
Sbjct: 66  VILLLYFGSAVSLTTIARVFDPSVAFVDIPPFWAGSIAIALVVGSYATETFRGAFNGVKS 125

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G +EAA ALG+   +    + +P+  R  +PP  +  L+L+K+++L   +G  + + V  
Sbjct: 126 GSIEAARALGMNGLQTFFYIRIPEMWRIALPPFGNHMLSLIKDTALISIIGLNETLFVAK 185

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              + TG+   + ++   IYL  S  I + +  L A
Sbjct: 186 QAASTTGKPFTMYIVVGLIYLGFSTAITISVLLLEA 221


>gi|86153193|ref|ZP_01071397.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|88597558|ref|ZP_01100792.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562521|ref|YP_002344300.1| putative amino acid ABC tansporter permease [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|85842919|gb|EAQ60130.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|88190150|gb|EAQ94125.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360227|emb|CAL35022.1| putative amino acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284926135|gb|ADC28487.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 247

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V  +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVASYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++      R    KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAIL-----RFSKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +   R S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|327470644|gb|EGF16100.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 226

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 10/176 (5%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  ++L  +++        P LV   + +   +  P++  +     + +   + +  + +
Sbjct: 52  KVLRSLARIFVEF--YQNTPLLVQFVIVF---YGLPLVSNY-----TIMPSIYWTAVLCV 101

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y  A+IAE++RSG+ ++PRGQ EAA++ G T+ +  R ++LPQA R I+PPL +Q +N
Sbjct: 102 GLYHGAYIAEVIRSGIQSIPRGQTEAALSQGFTYVETMRYIILPQAFRIILPPLINQVVN 161

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           L+KN+S    +   DL+ V  +        I        +Y  L   IA +  ++ 
Sbjct: 162 LIKNTSTVAIISGMDLMFVTKSWSALNSNYIPAFAGAALLYFLLCFPIASWGRKVE 217


>gi|319761714|ref|YP_004125651.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317116275|gb|ADU98763.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 248

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 18/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
              +  L       +  +    +T+  +    V +F LG+VL+L      R         
Sbjct: 8   IQDNWELLLVGQYPHGPIGGLAVTLFLSLVGIVLAFPLGVVLALCRLSPFRF-------- 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L + +T +++ +  + LI   +  +F  P +      G +T+        + L  Y +
Sbjct: 60  --LSWPATAIVYVVRGVPLIMFIFWTYFIVPHILGRPVAGITTM-------LVTLVIYQS 110

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AEIVR+G+  +P GQ EAA A+GL++ + T  VLLPQA+ +++P + SQ+++ +K++
Sbjct: 111 AYLAEIVRAGMQGLPFGQTEAARAIGLSYMQTTFKVLLPQAIYNMVPAIISQFVSSIKDT 170

Query: 339 SLAVAVGFADLVSVGGTI-INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L   +   +L      I  N      ++ ++   IY  +  ++      L  +IAL+ 
Sbjct: 171 ALGYVISVNELTFAASQINANLLTMPFQVYILLASIYFVICALLTQLARYLERRIALRR 229



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 35/68 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T +L+  G++ A  +G ++   RLS  + ++W     V V R +P ++ IF+ Y  
Sbjct: 27  GLAVTLFLSLVGIVLAFPLGVVLALCRLSPFRFLSWPATAIVYVVRGVPLIMFIFWTYFI 86

Query: 152 VLSVLPIP 159
           V  +L  P
Sbjct: 87  VPHILGRP 94


>gi|293408779|ref|ZP_06652618.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli B354]
 gi|291471957|gb|EFF14440.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli B354]
          Length = 224

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNALGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   FIY  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFIYFVISLSASLLVSYLKRRTA 224



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|302545138|ref|ZP_07297480.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462756|gb|EFL25849.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           himastatinicus ATCC 53653]
          Length = 247

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 15/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                 P + +     +F  +F L +   +  TR SR    +      L      +  G 
Sbjct: 6   WEHWLLPGVWITVQLTLFSAAFALAVAFGIGMTRTSRLRFVRF-----LTGAYVEIFRGT 60

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LVL+   + L F  P+   +             +  +A+     A+ +EIVR  + +V
Sbjct: 61  SALVLM---FWLAFVMPLAFGWQLF-------PMWAAVLAIGLNYGAYGSEIVRGAIASV 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
              Q EAAIAL  T  +  R V+LPQA+  +IPP  +  + +LK ++L  AV  AD+   
Sbjct: 111 APAQGEAAIALSFTPAQRMRRVILPQAIPEMIPPFNNLLIEILKATALVSAVNVADITFA 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                  TG++ +I  I + +Y  L+ ++   M  L  +
Sbjct: 171 AQLSRLATGESAQIYSIILVLYFVLAFILTRLMRLLERR 209



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L       A  +   +G  R S  + V ++   YVE+FR    LV+
Sbjct: 6   WEHWLLPGVWITVQLTLFSAAFALAVAFGIGMTRTSRLRFVRFLTGAYVEIFRGTSALVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +F+L   +          + 
Sbjct: 66  MFWLAFVMPLAFGWQLFPMW 85


>gi|139473935|ref|YP_001128651.1| transport system membrane protein [Streptococcus pyogenes str.
           Manfredo]
 gi|134272182|emb|CAM30427.1| transport system membrane protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 216

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+
Sbjct: 52  YLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSLA 
Sbjct: 104 EVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 164 MITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|15674926|ref|NP_269100.1| putative ABC transporter permease [Streptococcus pyogenes M1 GAS]
 gi|71910520|ref|YP_282070.1| cystine transporter permease [Streptococcus pyogenes MGAS5005]
 gi|209559254|ref|YP_002285726.1| Probable amino-acid ABC transporter permease protein yckA
           [Streptococcus pyogenes NZ131]
 gi|251782585|ref|YP_002996888.1| cystine transport system permease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|13622068|gb|AAK33821.1| putative ABC transporter (permease) [Streptococcus pyogenes M1 GAS]
 gi|71853302|gb|AAZ51325.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS5005]
 gi|209540455|gb|ACI61031.1| Probable amino-acid ABC transporter permease protein yckA
           [Streptococcus pyogenes NZ131]
 gi|242391215|dbj|BAH81674.1| cystine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 216

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+
Sbjct: 52  YLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSLA 
Sbjct: 104 EVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 164 MITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|282863109|ref|ZP_06272169.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282562091|gb|EFB67633.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 266

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 19/203 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  F+F  VLG+V++L      R       +    +YI  F       L+ I +   +  
Sbjct: 68  ASGFLFGLVLGLVVALM-----RLSSVAPYRWAAGVYIEIFRGLPA-LLIFIFVGVAVPL 121

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P        G       +  + + L    AA++AE  R+G+ AVP+GQMEAA +LG +
Sbjct: 122 AFP--------GTEIPGGTYGKVALGLGLVAAAYMAETFRAGIQAVPKGQMEAARSLGFS 173

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           H +A   V++PQA+R ++PPLT++ + L K+SSL + +G      +L   G  + +QT  
Sbjct: 174 HARAMVSVVIPQALRVVVPPLTNELVLLFKDSSLVLFLGVTLQERELTKFGRDLASQTAN 233

Query: 363 AIEIILIWMFIYLSLSIMIALFM 385
           +  I L+    YL ++I ++  +
Sbjct: 234 STPI-LVAGLCYLLVTIPLSFVV 255



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 33/65 (50%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            VNT     SG +   ++G +V   RLS+     W   VY+E+FR +P L++  F+  +V
Sbjct: 60  LVNTVVYTASGFLFGLVLGLVVALMRLSSVAPYRWAAGVYIEIFRGLPALLIFIFVGVAV 119

Query: 153 LSVLP 157
               P
Sbjct: 120 PLAFP 124


>gi|227818418|ref|YP_002822389.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337417|gb|ACP21636.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 235

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 4/183 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R+     G A    Y+S      +PTLV + L Y   F         ++        F  
Sbjct: 48  RYAPGPLGNAFVTAYVS--YHRNVPTLVQLLLWYFGIFTLMPDPVTFWLNDHNAEAIF-- 103

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L    AA+ +E +RSG+ AV  GQMEAA ALG ++  A R V++PQ  R+ +P L 
Sbjct: 104 AVIGLGLCQAAYFSEDLRSGMRAVSPGQMEAARALGHSYVSAMRFVMVPQGSRNALPALI 163

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  ++L KNSSLAVA+G A+L      I N + +  E  L+   +YL  S+MI      +
Sbjct: 164 NHSVSLFKNSSLAVAIGVAELTYAVKEIENLSFRTFESYLLVTVLYLVFSLMIMALGAYV 223

Query: 389 NAK 391
             +
Sbjct: 224 ARR 226



 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 4/96 (4%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           + F++ + +     +  Y + +L+G   TF +A      A  +  L+   R +   L   
Sbjct: 2   SSFDLSEIL----GNPEYVSMLLLGIKMTFVVAIGSWTLAMTLALLLLGLRYAPGPLGNA 57

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
               YV   RN+P LV +   Y  + +++P P    
Sbjct: 58  FVTAYVSYHRNVPTLVQLLLWYFGIFTLMPDPVTFW 93


>gi|145299601|ref|YP_001142442.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           component [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142852373|gb|ABO90694.1| ABC-type histidine/lysine/arginine/ornithine transporter, permease
           component [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 246

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 77/209 (36%), Gaps = 22/209 (10%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------------------- 248
           +    K  + +   Y  T +I G+P LVL+ L +                          
Sbjct: 40  KLSPYKWARGIATTY--TTVIRGIPDLVLMMLLFFGGQVLINSVCTWVNETYNNFLLESN 97

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P     + +        F +    +     A++ E  R  ++AV +G++EAA A G+   
Sbjct: 98  PNQEWVSLLPDYIDISPFAAGVATIGFIFGAYMTETFRGAILAVDKGELEAARAFGMRAT 157

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +    +L PQ MR  +P   + +L LLK ++L   +G  D+V         T       +
Sbjct: 158 QVFVRILFPQMMRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKASLAAGSTQLPFTFYM 217

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I+L  + +    +       A+K +
Sbjct: 218 AVALIFLIFTAVSTSALKWAERHYAIKTR 246


>gi|152996347|ref|YP_001341182.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Marinomonas
           sp. MWYL1]
 gi|150837271|gb|ABR71247.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Marinomonas sp. MWYL1]
          Length = 220

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 14/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   +  L ++++ F+  L R +     K + ++YI  F   G   L+ +   Y +
Sbjct: 16  VTIQIVAMALPLAVLMA-FSFGLIRLYAPAPFKQIAIIYIEFF--RGTSALIQL---YWI 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P                  +  +AL     ++  E+VR  + +VP+GQ EA+IAL 
Sbjct: 70  YFVLPFF--------GITIDAMTAAVVALGLNIGSYGTEVVRGAIQSVPKGQYEASIALN 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +    +++PQA+ ++IPP  +  + L+K +SL   +   DL      + + T Q  
Sbjct: 122 FTSSQRLWRIIMPQALVNMIPPFGNLAIELVKATSLVSLITIGDLTFKAKMLADTTLQVG 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           EI  + +  Y  ++  +  F+ RL   ++
Sbjct: 182 EIFGVVLLFYFVMAQFLVFFIRRLETHLS 210



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 33/85 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +    +  A ++    G  RL A      I  +Y+E FR    L+ +++
Sbjct: 9   VLLQGAVVTIQIVAMALPLAVLMAFSFGLIRLYAPAPFKQIAIIYIEFFRGTSALIQLYW 68

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           +Y  +       D        + LN
Sbjct: 69  IYFVLPFFGITIDAMTAAVVALGLN 93


>gi|114769150|ref|ZP_01446776.1| amino acid ABC transporter protein, permease protein [alpha
           proteobacterium HTCC2255]
 gi|114550067|gb|EAU52948.1| amino acid ABC transporter protein, permease protein [alpha
           proteobacterium HTCC2255]
          Length = 218

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    +    L+   +T+       V ++VLG+V+++     ++     T      
Sbjct: 2   EWDWNVVASVTPSLLNGLIVTVQATIVGAVLAYVLGLVIAILKMSGNKAVAFIT------ 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y S+  I   P LV +   Y L +  P  G F           F++  I L  + + + 
Sbjct: 56  -YWSSEFIRRTPLLVQL---YFLFYVLPDFGIF--------LSPFVAGVIGLGLHFSTYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+ R+G+  VP+GQ EAA +L  +     R V+LPQA+  + PPL +  + + K + L 
Sbjct: 104 SEVYRAGIENVPKGQWEAARSLNYSAYHTWRFVILPQAIPPMFPPLANYLITMFKETPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A+   +L +      N   + +E + +    +L +SI  A+   ++  K  
Sbjct: 164 SAITVVELFNAANIYSNSHYKYLEPMTLVGLFFLLVSIPAAMIALKIENKYK 215



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 36/81 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T      G + A ++G ++   ++S NK VA+I     E  R  P LV ++FL
Sbjct: 15  LLNGLIVTVQATIVGAVLAYVLGLVIAILKMSGNKAVAFITYWSSEFIRRTPLLVQLYFL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           +  +          +    G+
Sbjct: 75  FYVLPDFGIFLSPFVAGVIGL 95


>gi|59710614|ref|YP_203390.1| cystine transport system permease protein [Vibrio fischeri ES114]
 gi|59478715|gb|AAW84502.1| cystine transport system permease protein [Vibrio fischeri ES114]
          Length = 223

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 12/185 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFM 267
           R F       L  LYIS F   G P LV + L Y  L    P+    +          F 
Sbjct: 44  RVFKVPVFDQLSQLYISFF--RGTPLLVQLFLLYYGLPQVFPIFVGLD---------AFS 92

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  I L+ + AA++AE +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L
Sbjct: 93  AAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSIGMTTSQAMRRIILPQATRVALPSL 152

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +++++K++SLA  +G A++++      + + +  E  L    IY  + +++      
Sbjct: 153 MNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFKFFEAFLAVALIYWGVVVILTRVQIW 212

Query: 388 LNAKI 392
              K+
Sbjct: 213 AEEKL 217


>gi|328544438|ref|YP_004304547.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
 gi|326414180|gb|ADZ71243.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 272

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 5/226 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R             ++ V S   G +LS+    L+R       + L   Y+  F   G 
Sbjct: 52  QRYWPNYVSGFWVTIQLVVLSIAAGALLSV-PIALARSMRNPVVRGLAFAYVYFF--RGT 108

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L    L Y          +   +        +  +  A +  T+A+ AEI+R  +  V
Sbjct: 109 PLLAQTFLIYYGAGSFRDGLEAAGLWW-FFRDAWYCILFAFTLNTSAYQAEILRGAVENV 167

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ E A+ALGL        ++LPQA+   + P  ++ + ++K S++A  V   DL+  
Sbjct: 168 PRGQWEGAMALGLPRPVIFFRIILPQALIVALRPYGNEIILMIKGSAIASIVTIFDLMGE 227

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +++    +  +    +YL +   +    +RL A++     +
Sbjct: 228 TRRAFSRSLD-FQAYIWAAVLYLIIVETLRRVWDRLEARLTRHLAR 272



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 30/97 (30%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    + GF  T  L    +    ++   +   R   N +V  +   YV  FR  P L
Sbjct: 52  QRYWPNYVSGFWVTIQLVVLSIAAGALLSVPIALARSMRNPVVRGLAFAYVYFFRGTPLL 111

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
              F +Y    S     + + +  F        L   
Sbjct: 112 AQTFLIYYGAGSFRDGLEAAGLWWFFRDAWYCILFAF 148


>gi|222081206|ref|YP_002540569.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725885|gb|ACM28974.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 235

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/183 (32%), Positives = 92/183 (50%), Gaps = 4/183 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R+     G A+   Y+S      +PTLV + L Y   F    + Q      +  + E   
Sbjct: 48  RYAPGPIGNAVVTAYVS--YHRNVPTLVQLMLWYFGIFAL--MPQPVTDWLNDHNAEATF 103

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L    AA+ +E +RSGL +V  GQMEAA ALG  +  A R V++PQ +R+ +P L 
Sbjct: 104 AIIGLGLCQAAYFSEDLRSGLRSVNPGQMEAARALGHGYISAMRFVMIPQGIRNALPALI 163

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  ++L +NSSLAVA+G A+L      + N +    E  L+   +YL+ S+MI      +
Sbjct: 164 NHSVSLFQNSSLAVAIGVAELTYAVKEVENLSFLTFETYLLATVLYLAFSLMIMTAGGYV 223

Query: 389 NAK 391
             +
Sbjct: 224 TRR 226



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 36/84 (42%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            S+  Y + +L G   TF +A    + A  +  L+   R +   +   +   YV   RN+
Sbjct: 10  LSNPEYVSMLLHGVEMTFVVAIGSWLLAMTLAMLLLGLRYAPGPIGNAVVTAYVSYHRNV 69

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSI 163
           P LV +   Y  + +++P P    
Sbjct: 70  PTLVQLMLWYFGIFALMPQPVTDW 93


>gi|291616687|ref|YP_003519429.1| GltJ [Pantoea ananatis LMG 20103]
 gi|291151717|gb|ADD76301.1| GltJ [Pantoea ananatis LMG 20103]
 gi|327393113|dbj|BAK10535.1| glutamate/aspartate transport system permease protein GltJ [Pantoea
           ananatis AJ13355]
          Length = 246

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK-IFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   ++ +F +G    +  T  +R     
Sbjct: 5   WNWGIFLEQAPFGNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRLLSTI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+    F     P LV   L      +     QF           F+S
Sbjct: 65  GTCYVELFRNIPLIVQFFFWYLVAPELVGQDLGMWFKSELDPNLQF-----------FIS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SVVCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++++I + M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSSHAYESFTAITLAYVGINLVIMVLMGLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 64/183 (34%), Gaps = 17/183 (9%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
            +    G   E+A F           +++Y   +  GF  T  ++    I A  +G+  G
Sbjct: 2   GIDWNWGIFLEQAPFG----------NTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
             R   N+L++ I   YVE+FRNIP +V  FF Y     ++        L          
Sbjct: 52  ILRTVPNRLLSTIGTCYVELFRNIPLIVQFFFWYLVAPELVGQ-----DLGMWFKSELDP 106

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                ++      +F  + V   V +      R  ++     G  LP  Y    L     
Sbjct: 107 NLQFFISSVVCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYR 166

Query: 234 TLV 236
            +V
Sbjct: 167 VIV 169


>gi|257885498|ref|ZP_05665151.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257821354|gb|EEV48484.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
          Length = 213

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +  + L     T+       + S  LGI+L+L         H K  +   LL  
Sbjct: 1   MEYLIEVMPQLLVGALTTLKLFLFTLIGSLPLGIILALGL-----SLHFKPLRY--LLQT 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   +                   V   F +  IA     AA+ AEI
Sbjct: 54  YVWVMRGTPLLLQLIFIFY-----------GLPTIGIVFDRFEAALIAFILNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGIQSIPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYIL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++  G   + +    +  +L    IYL+L+ ++ + M ++  K+    
Sbjct: 163 GLGDVMRAGKIAMERDA-TLLPLLGVAIIYLTLTGILTIVMKQVEGKLNYYR 213



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG + T  L    +I +  +G ++  G     K + ++ + YV V R  P L+ + F+
Sbjct: 11  LLVGALTTLKLFLFTLIGSLPLGIILALGLSLHFKPLRYLLQTYVWVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + ++  + D          LN              + 
Sbjct: 71  FYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSI 110


>gi|325292972|ref|YP_004278836.1| general L-amino acid transport system permease protein AapM
           [Agrobacterium sp. H13-3]
 gi|325060825|gb|ADY64516.1| general L-amino acid transport system permease protein AapM
           [Agrobacterium sp. H13-3]
          Length = 385

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 63/274 (22%), Positives = 123/274 (44%), Gaps = 14/274 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----- 191
           R  P LV++ F    V  ++P      +    +F+    ++F  L         V     
Sbjct: 114 RWRPILVMVMFTILLVPMLIPKAPFKRLNALALFIILPVIAFFLLIGGVFGLPVVETQLW 173

Query: 192 FSFVLGIVLSLFATRLSRHFHE--KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
              ++ ++LS F   +S  F      G+   L  I    +  +  +  I L   L F   
Sbjct: 174 GGLMVTLILSFFGIAVSLPFGILLALGRRSNLPVIKMLCVLFIEVIRGIPLITVLFFASI 233

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L  F   G +    +F+   + +S +++A++AE++R GL A+P+GQ E A +LGL + +
Sbjct: 234 MLPLFLPDGWT--FDKFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQ 291

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI--- 366
            TRL++LPQA++ +IP + + ++ L K++SL   +G  DL+ +     +    A  +   
Sbjct: 292 KTRLIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGMFDLLGIVTLNQSDANWATPVTAM 351

Query: 367 --ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +   FI+      ++ +   +   +    K+
Sbjct: 352 TGYIFAGFIFWIFCFGMSRYSLFMERHLDTGHKR 385



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +   G L+  GR S   ++  +C +++EV R IP + V+FF 
Sbjct: 172 LWGGLMVTLILSFFGIAVSLPFGILLALGRRSNLPVIKMLCVLFIEVIRGIPLITVLFFA 231

Query: 149 YKSVLSVLPIPDHSIVL 165
              +   LP        
Sbjct: 232 SIMLPLFLPDGWTFDKF 248


>gi|261819587|ref|YP_003257693.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261603600|gb|ACX86086.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 364

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 72/340 (21%), Positives = 131/340 (38%), Gaps = 54/340 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G     G+ P T       A+ +G ++         I    + T+   GR  
Sbjct: 74  WVFIHARFG-HFMYGLYPATEVWRINFALAIGLLS---------ILPMFLKTIPYRGR-- 121

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+    PL+  + LY                     +         
Sbjct: 122 -----------YIAVWTVAYPLIAWWLLYGG-------------FGGLSRVETYQWGGLM 157

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L      R       + L + +I  +    L T++ ++ 
Sbjct: 158 LTLIIAAVGIAGALPLGILLAL-----GRRSTLPIVRMLSVAFIEFWRGVPLITVLFMS- 211

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 212 ---------SVMLPLFLTEGTTIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 262

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + +   LV+LPQA++ +IP L +  ++L K++SL + +G  DL S         
Sbjct: 263 ESLGLGYWRMQGLVILPQALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFSSIQQATVDP 322

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G + E  +    +Y      ++ +   L  +     K
Sbjct: 323 TWLGMSTEGYVFAAMVYWIFCFSMSRYSQHLENRFNTGHK 362


>gi|228906389|ref|ZP_04070273.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
 gi|228853301|gb|EEM98074.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis IBL 200]
          Length = 214

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 19/215 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QVEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           I  Q     I   ++   +Y  ++  +++   RL 
Sbjct: 178 ISGQNVNYMIPTFILVACMYFIVNYSLSILSRRLE 212



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|171316940|ref|ZP_02906147.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097864|gb|EDT42684.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 237

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG V ++    ++R    K        Y  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASISLGFVCAVPL-AVARVSKNKWLSMPVRFY--TYVFRGTPLYVQLLLMYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   + +  +     F    +A +  T A+  EI    + A+P G++EAA A G
Sbjct: 82  MYSLEFVRSHSLLD-AFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R V+LP A+R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MSPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   IYL++S  +     R    
Sbjct: 201 QSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S NK ++   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWLSMPVRFYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|78059831|ref|YP_366406.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77964381|gb|ABB05762.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia sp. 383]
          Length = 218

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F          L       + + +FV G V       + R       +   +LY+  F  
Sbjct: 4   FTFQDIAWNLLLAARWTVLLSLITFVGGSVAGFALLAM-RISASAALRRFVILYVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P++              +++  + L+   +A++ +I R  +
Sbjct: 61  QGTPLLMQLFLGF---FGLPLI--------GIDVTPWVAASVVLTLNASAYLTDIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ  AA +LG+T  +  R V+ PQA +  +PP     +  +K+++L   +G  +L
Sbjct: 110 DAVPRGQWNAAASLGMTWTQQLRYVVWPQAWKIALPPTVGFLVQAVKSTALTSIIGLTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  I N   +   I  +   +Y ++   +  +   L  +  + + +
Sbjct: 170 TKTGNIITNAVFKPFPIYAMVALLYFAMCFPLTWYARVLERRYRVAKAR 218



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 1/112 (0%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ +T     A  +L+    T  L+    +  ++ G  + A R+SA+  +     +YVE+
Sbjct: 1   MIEFTFQD-IAWNLLLAARWTVLLSLITFVGGSVAGFALLAMRISASAALRRFVILYVEL 59

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F+  P L+ +F  +  +  +       +     + LN             +A
Sbjct: 60  FQGTPLLMQLFLGFFGLPLIGIDVTPWVAASVVLTLNASAYLTDIWRGCVDA 111


>gi|317407717|gb|EFV87647.1| hypothetical protein HMPREF0005_03582 [Achromobacter xylosoxidans
           C54]
          Length = 223

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             I + + VLG+++++                 +LP  ++  F +   P LV +   Y L
Sbjct: 21  LVITIQATVLGMLVAVTLGLALALLRRSRLALLSLPTAFVIEF-VRSTPLLVQM---YFL 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P+                 +  +AL  + A + AE+ R+G+ AVPRGQ+EAA AL 
Sbjct: 77  FYVLPLT--------GVQMSPLATGIVALGLHYATYCAEVYRAGIEAVPRGQLEAARALN 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    V+LPQA+  ++P L +  + + K++ L  A+   +L+     I + T +  
Sbjct: 129 MSPWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKMIGSTTFRYT 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E + +   ++L+LS++ A  +  L A++   
Sbjct: 189 EPLTLVGVLFLALSLIAAWGVRGLEARLQRY 219


>gi|284033080|ref|YP_003383011.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283812373|gb|ADB34212.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 273

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 21/262 (8%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  L+V F    +    +             F  +  LS    T++  A  FV   + G 
Sbjct: 29  ILVLLVAFAAVSADWGQIGTVFFEPKFIEAAF-RDGLLSALVKTLEYTAGAFVIGLIGGT 87

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L+L      R       + +   YI  F   GLP +V+        F    L    F G
Sbjct: 88  LLALM-----RLSSVGPYRWIATAYIEFF--RGLPAIVV--------FIAFSLLPLAFEG 132

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                  +  +++AL    AA++AE++R+G+ AVP+GQ+EAA +LG+    ATR ++LPQ
Sbjct: 133 MRIPFDPYGVVWLALGIVAAAYMAEVIRAGIQAVPKGQVEAARSLGMPPGLATRKIVLPQ 192

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVG----FADLVSVGGTIINQTGQAIEIILIWMFIY 374
           A R ++PPLT+  + L+K+SSL   +G      +L   G  + N T   +  ++   F Y
Sbjct: 193 AFRIVLPPLTNDLILLVKDSSLVFIIGTSATAYELTGFGRELAN-TYANLTPLVTAGFCY 251

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
           L +++ + L + RL +K A   
Sbjct: 252 LLITLPLGLLVRRLESKAARTR 273



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 29/77 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   V T        +   I GTL+   RLS+     WI   Y+E FR +P +VV    
Sbjct: 64  LLSALVKTLEYTAGAFVIGLIGGTLLALMRLSSVGPYRWIATAYIEFFRGLPAIVVFIAF 123

Query: 149 YKSVLSVLPIPDHSIVL 165
               L+   +       
Sbjct: 124 SLLPLAFEGMRIPFDPY 140


>gi|228963739|ref|ZP_04124881.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228795975|gb|EEM43441.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 214

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQVLGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F            +++ +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIIIAVIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELMHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFMVVACMYFIVNYSLSILSRRLELR 214



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|33594683|ref|NP_882327.1| putative amino acid ABC transporter permease protein [Bordetella
           pertussis Tohama I]
 gi|33598477|ref|NP_886120.1| putative amino acid ABC transporter permease protein [Bordetella
           parapertussis 12822]
 gi|33603420|ref|NP_890980.1| putative amino acid ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
 gi|33564759|emb|CAE44084.1| putative amino acid ABC transporter permease protein [Bordetella
           pertussis Tohama I]
 gi|33574606|emb|CAE39256.1| putative amino acid ABC transporter permease protein [Bordetella
           parapertussis]
 gi|33577544|emb|CAE34809.1| putative amino acid ABC transporter permease protein [Bordetella
           bronchiseptica RB50]
          Length = 366

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 102/237 (43%), Gaps = 14/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+       +     +     +  F   L     +    L R       KAL ++YI
Sbjct: 141 MWGGVLGLTYVENARWGGLPLTLILATFGIALAFPFGVLL-ALGRRSRMPAIKALCVVYI 199

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L +L+ ++           +    F+       + +   IA+  + AA+IAE 
Sbjct: 200 ELIRGVPLISLLFMS----------SVMLPLFLPEGFSIDKLLRAQIAIIMFAAAYIAET 249

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL A+P+GQ E A +LGLT+ +  R V+LPQA++ +IPPL S ++ L K++SL V +
Sbjct: 250 VRGGLQAIPKGQYEGADSLGLTYWQQMRKVILPQALKIVIPPLVSIFIALFKDTSLVVII 309

Query: 345 GFADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  DL        +     G  +E  +    IY      ++ +   L  ++A   ++
Sbjct: 310 GIFDLTLAAKAALSDAAWRGFGVEAYVFIALIYFVFCFSMSKYSQALEHRLATGHQR 366



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 4/193 (2%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A   G   T  LA  G+  A   G L+  GR S    +  +C VY+E+ R +P + ++F 
Sbjct: 154 ARWGGLPLTLILATFGIALAFPFGVLLALGRRSRMPAIKALCVVYIELIRGVPLISLLFM 213

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLF 203
               +   LP       L           +             +    +     + L+ +
Sbjct: 214 SSVMLPLFLPEGFSIDKLLRAQIAIIMFAAAYIAETVRGGLQAIPKGQYEGADSLGLTYW 273

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                    +     +P L      +F   +LV+I   + L              G  V 
Sbjct: 274 QQMRKVILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDLTLAAKAALSDAAWRGFGVE 333

Query: 264 PEFMSLYIALSCY 276
                  I     
Sbjct: 334 AYVFIALIYFVFC 346


>gi|152974370|ref|YP_001373887.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus subsp. cytotoxis NVH 391-98]
 gi|152023122|gb|ABS20892.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cytotoxicus NVH 391-98]
          Length = 214

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 2/203 (0%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   + G++++L    +S       G  +  +  +   I      V++ +   L     +
Sbjct: 12  IVFLLKGLLVTLEIAIISIFLSFLIGSIVGTVRYTKIPILSQIFAVIVEIIRNLPLLLII 71

Query: 251 LGQFNFIGGSTVSPEF-MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
              +  +  + +  E   +  +AL+ + AA I+EIVRSGL+++ +GQ+EA  A GL++ +
Sbjct: 72  FFTYFALPEAGLKLEIKTAAIVALTIFEAAMISEIVRSGLLSIEKGQIEAGRASGLSYIQ 131

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIIL 368
               ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     I  Q     I   +
Sbjct: 132 TLWYIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQIINGQNVNYMIPTFV 191

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           +   IY  ++  +++   +L   
Sbjct: 192 LVACIYFVVNYQLSILSRKLEHH 214



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   +  + +IG++VG  R +   +++ I  V VE+ RN+P 
Sbjct: 8   TGDHIVFLLKGLLVTLEIAIISIFLSFLIGSIVGTVRYTKIPILSQIFAVIVEIIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|331266688|ref|YP_004326318.1| ABC transporter membrane-spanning permease-amino acid transport
           system (aspartate/glutamate transport, putative)
           [Streptococcus oralis Uo5]
 gi|326683360|emb|CBZ00978.1| ABC transporter membrane-spanning permease-amino acid transport
           system (aspartate/glutamate transport, putative)
           [Streptococcus oralis Uo5]
          Length = 266

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PL       + G P LV + L Y       K +  Q+         P  +   +A +   
Sbjct: 75  PLQAFFVSFLKGTPILVQLMLTYYGIPLLLKAINQQWGTGFNINAIPAALFAIVAFAFNE 134

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SLA + G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 195 TSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|237799097|ref|ZP_04587558.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331021951|gb|EGI02008.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 232

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 100/233 (42%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + M   N  L F  L            F L   L L   R+S++            
Sbjct: 1   MIFDYNMIWENLPLYFDGLLTTLKLLAISLGFGLLAALPLGLMRVSKNPWVNLP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKIAERR 222



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 38/119 (31%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  Y            G + T  L    +    +    +G  R+S N  V     +Y  V
Sbjct: 2   IFDYNMIWENLPLYFDGLLTTLKLLAISLGFGLLAALPLGLMRVSKNPWVNLPAWLYTYV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            R  P LV +F +Y  +     + +  +            L+F   T    A+I   S 
Sbjct: 62  IRGTPMLVQLFLIYYGLAQFDAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSL 120


>gi|195978272|ref|YP_002123516.1| probable amino-acid ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195974977|gb|ACG62503.1| probable amino-acid ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
          Length = 217

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    +  +  + +I + + L+F  P                 +  Y+  S  +AA+I+
Sbjct: 52  YLVRGYVSIMRGVPMIVVLFVLYFGLPYY--------GLELSALLCAYLGFSLVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+ + A+ +GQ EAA ALGL +    + V+LPQA R  IPPL +  ++++K+SSLA 
Sbjct: 104 EVFRASIDAIDQGQWEAARALGLPYVSIVKHVILPQAFRIAIPPLGNVVIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++      L  ++ L
Sbjct: 164 MITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQGFLEKRLRL 215


>gi|195978682|ref|YP_002123926.1| amino-acid ABC transporter permease protein [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|225867998|ref|YP_002743946.1| ABC transporter permease protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|195975387|gb|ACG62913.1| amino-acid ABC transporter permease protein [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|225701274|emb|CAW98258.1| ABC transporter permease protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 267

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 2/178 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           P+  +    + G P LV + L Y     F K +  ++ F       P  +    A +   
Sbjct: 76  PIQAVFVSFLRGTPILVQLMLSYYGIPLFLKFLNQRYGFDWNINAIPASVFAITAFAFNE 135

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ + +V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 136 AAYTSETIRAAIQSVDAGEIEAAKSLGMTSVQVYRRVIIPNAAVVATPTLINGLIGLTKG 195

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SLA   G  ++ +    +     +  E  +    +Y  +SI+I      +  K+A+K
Sbjct: 196 TSLAFNAGIVEMFAQAQILGGADYRYFERYISVALVYWGISILIEQAGRLIEYKMAIK 253


>gi|153833179|ref|ZP_01985846.1| membrane protein [Vibrio harveyi HY01]
 gi|148870609|gb|EDL69517.1| membrane protein [Vibrio harveyi HY01]
          Length = 229

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 7/212 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G++L++     S     +     P+    T +      LV++ + + 
Sbjct: 15  WMTVQLAFTSLLVGLILAVVFA--SGEMSRRVFVKWPMTAFVTIVRGLPEILVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  +ALS   A++ ++ +R  L AV RGQ EAA AL
Sbjct: 73  -----STQVLFLITGDFIEVSPFLSGVVALSLIFASYASQTLRGALKAVGRGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GISQAHAFVRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    IYL ++++    +  ++ K +++
Sbjct: 188 FTWYATAAAIYLVITLITQRAVKLIDKKFSIQ 219


>gi|254229408|ref|ZP_04922824.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio sp. Ex25]
 gi|262396868|ref|YP_003288721.1| arginine ABC transporter permease protein ArtM [Vibrio sp. Ex25]
 gi|151938099|gb|EDN56941.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio sp. Ex25]
 gi|262340462|gb|ACY54256.1| arginine ABC transporter permease protein ArtM [Vibrio sp. Ex25]
          Length = 222

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++ V S V+G +L+L  T             +    I+ F   
Sbjct: 1   MNEQHVWQMLDGLGTSLQLTVASLVVGCLLALMMTLTL-ILRTPGLHWVSRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y       V+ +  F   + +S  +    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDVVRESVF--WTWLSQPWFCAMLALALNTAAYSTQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPSGQWQACRALGMNKTATL-KVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|172057735|ref|YP_001814195.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
 gi|171990256|gb|ACB61178.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sibiricum 255-15]
          Length = 228

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 8/172 (4%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++T  I  +  + ++ L +  +F  PV+                +     S  +AA++AE
Sbjct: 64  VATLYISFMRGVPILVLLFMFYFGLPVIN--------IQLDALTAAIAGFSLNSAAYMAE 115

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RS L++V RGQ EAA +LGL+  +    ++LPQA+R  IPPL++  L+L+K SSLA  
Sbjct: 116 IIRSSLLSVDRGQQEAAQSLGLSRYRVFVGIILPQAVRLAIPPLSNVLLDLVKASSLAAM 175

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +   ++      +  +    + +  +  FIY  +  +IA     L  + A  
Sbjct: 176 ITVPEIFQRAKIVGGREFDYMTVYFVIAFIYWGICAVIAAGQEMLERRFARY 227


>gi|296533326|ref|ZP_06895930.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296266342|gb|EFH12363.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 219

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 14/223 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +     + + + V+  +L L    L R    +  +      ++T  + G+
Sbjct: 11  RDFLPILLQGVWVTIGVTLGALVIATLLGLV-WALMRTSGTRWLEWPAKAVVNT--LRGI 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + ++F  P L              F +  I L    +A++ E+ RSG++AV
Sbjct: 68  PIIVQL---FYIYFVLPDL--------GIDLTAFQAGVIGLGVAYSAYMGEVFRSGMLAV 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             G +EAA +LGL+  +    V+LPQA R ++PP  +  + +LK+SS A  +  A++ + 
Sbjct: 117 DPGAVEAAESLGLSRLRIMTRVILPQATRIVLPPYGNMLIMMLKDSSQASVITVAEISTQ 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              I + T +  E+  +   +YL+LS+ + + + RL  +   +
Sbjct: 177 SRMIASSTFKNQEVFTLAALLYLALSVPLIILVGRLEKRFGRR 219



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 38/107 (35%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           S   +   +L G   T  +    ++ AT++G +    R S  + + W  +  V   R IP
Sbjct: 9   SARDFLPILLQGVWVTIGVTLGALVIATLLGLVWALMRTSGTRWLEWPAKAVVNTLRGIP 68

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +V +F++Y  +  +            G+ +               A
Sbjct: 69  IIVQLFYIYFVLPDLGIDLTAFQAGVIGLGVAYSAYMGEVFRSGMLA 115


>gi|126668662|ref|ZP_01739613.1| amino acid ABC transproter, permease protein [Marinobacter sp.
           ELB17]
 gi|126626840|gb|EAZ97486.1| amino acid ABC transproter, permease protein [Marinobacter sp.
           ELB17]
          Length = 189

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 10/190 (5%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R         L ++ IS F   G P LV + L Y   +  P L         TV
Sbjct: 4   CLFAVVRVLRVPIINQLTIVVISFF--RGTPLLVQLFLFY---YGLPQL-----FSALTV 53

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L+ + +A++AE +R+ +I V R Q EAA+++G+T+ +  R ++LPQA R 
Sbjct: 54  INGVTATIMGLTLHFSAYMAESIRAAIIGVDRSQTEAALSIGMTNIQLMRRIVLPQATRV 113

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L + +++++K +SLA  +G  +L+       + +    E  ++   +Y  +  +++
Sbjct: 114 ALPTLMNYFIDMIKATSLAFTLGVTELMGATQKEASGSFLYFEAFIVAAVMYWVVVELLS 173

Query: 383 LFMNRLNAKI 392
                L  ++
Sbjct: 174 QLQKYLETRL 183


>gi|326318771|ref|YP_004236443.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375607|gb|ADX47876.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 222

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 13/235 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            + L F  +  +    F       +  + V + + G++       L R   +K       
Sbjct: 1   MMNLDFSFYSWDIISKFVLKGFYFSIVLTVVATIGGVLFGTLL-ALMRLSGKKWLDVPAT 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y++     G+ ++ L+ +        P L               MS  I    + AA+ 
Sbjct: 60  IYVN-----GMRSIPLVMVILWFFLLVPFLVGRPIGAE-------MSAVITFIAFEAAYF 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ ++PRGQ+ A  ALG+T+ +  +LV+LPQA R+++P L +Q + L +++SL 
Sbjct: 108 SEIMRAGIQSIPRGQVFAGQALGMTYGQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLV 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+G  D++    T     G+ IE  L+   +Y  +   ++  + RL+ KIA+  
Sbjct: 168 YAIGAYDMLKGFETAGKNYGRPIEAYLLAAVVYFIMCFALSSAVKRLHRKIAIIR 222



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 2/162 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              +  +L GF  +  L     I   + GTL+   RLS  K +     +YV   R+IP +
Sbjct: 12  DIISKFVLKGFYFSIVLTVVATIGGVLFGTLLALMRLSGKKWLDVPATIYVNGMRSIPLV 71

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +VI + +  V  ++  P  + +     F+      F  +       I       G  L +
Sbjct: 72  MVILWFFLLVPFLVGRPIGAEMSAVITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGM 131

Query: 203 FATRLSR--HFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
              +  +     +     LP+L   T ++F   +LV     Y
Sbjct: 132 TYGQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAY 173


>gi|210615936|ref|ZP_03290859.1| hypothetical protein CLONEX_03078 [Clostridium nexile DSM 1787]
 gi|210150029|gb|EEA81038.1| hypothetical protein CLONEX_03078 [Clostridium nexile DSM 1787]
          Length = 216

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 106/225 (47%), Gaps = 15/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS     M  +  IF F+ +L + L +      R       + +  +YIS  ++ G P
Sbjct: 5   MMLSMMAQGMIKSFWIFAFTLILSLPLGIVV-SFGRMSKNVVIRTIVKVYIS--IMRGTP 61

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM--SLYIALSCYTAAFIAEIVRSGLIA 291
            ++ +   Y   +         ++    ++PE+M  ++ +      AA+ AEI R G+ +
Sbjct: 62  LILQLMFIYFGRY---------YVLKMQMTPEWMNTAVILGFVLNYAAYFAEIYRGGIES 112

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ EAA  LG T  +    ++ PQ M+ I+P +T++ + L+K++S+A  +   ++ +
Sbjct: 113 MPIGQYEAAEILGYTKVQTFVKIIFPQVMKRILPSITNEVITLVKDTSIAYVLSVQEMFT 172

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           V   I + +  ++  ++I    Y   + ++A  M R+  K+    
Sbjct: 173 VAKAI-SASQASVSPLIIAAVFYYVFNFIVAFVMERIEKKMDYYR 216



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 38/75 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + +FW+    +I +  +G +V  GR+S N ++  I +VY+ + R  P ++ + F+Y  
Sbjct: 13  GMIKSFWIFAFTLILSLPLGIVVSFGRMSKNVVIRTIVKVYISIMRGTPLILQLMFIYFG 72

Query: 152 VLSVLPIPDHSIVLP 166
              VL +      + 
Sbjct: 73  RYYVLKMQMTPEWMN 87


>gi|205356386|ref|ZP_03223151.1| putative amino-acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345771|gb|EDZ32409.1| putative amino-acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 247

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V+ +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVVSYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++           KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAILHF-----SKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +     S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFSLAILHFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|329296084|ref|ZP_08253420.1| glutamate/aspartate transport system permease protein gltJ [Plautia
           stali symbiont]
          Length = 246

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK-IFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   ++ +F++G    +  T  +R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVAVSCCAWIIAFLVGSFFGILRTVPNRWLSTI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+    F     P LV   L      +     QF           F+S
Sbjct: 65  GTCYVELFRNIPLIVQFFFWYLVAPELVGEKLGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VL P A R I+PP+T
Sbjct: 114 STICLGLFTAAHVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLPPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  DL +  G +++ +  A E        Y+ ++++I L M+ +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDLAAQAGKLLDYSAHAYESFTAITLAYVGINLVIMLIMSLV 233

Query: 389 NAKIAL 394
             KI L
Sbjct: 234 ERKIRL 239



 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 10/108 (9%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
            +    G   ++A F           +++Y   +  GF  T  ++    I A ++G+  G
Sbjct: 2   GIDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVAVSCCAWIIAFLVGSFFG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
             R   N+ ++ I   YVE+FRNIP +V  FF Y     ++       
Sbjct: 52  ILRTVPNRWLSTIGTCYVELFRNIPLIVQFFFWYLVAPELVGEKLGMW 99


>gi|289677305|ref|ZP_06498195.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. syringae FF5]
 gi|330981782|gb|EGH79885.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 232

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L + P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKSTPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKIAERR 222


>gi|206579836|ref|YP_002239087.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935990|ref|YP_003440049.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|206568894|gb|ACI10670.1| glutamine ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288890699|gb|ADC59017.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 218

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   LI G P +V +   Y   F  P++                +  I +   + A+IAE
Sbjct: 57  VFVELIRGTPIMVQVMFIY---FALPMV-------LPVRIDPVPAAIITIVINSGAYIAE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  ++++ +G  EA++A+GL+ R     V++P A R +IP L +Q++  +K++SL + 
Sbjct: 107 ITRGAILSINKGFKEASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIKDTSLFIV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G A+L   G  II    +A+E+      IYL L++ ++  + +L  +I +
Sbjct: 167 IGVAELTRQGQEIIAGNFRALEVWTAVAMIYLFLTLCLSFLLKQLEKRIHI 217


>gi|163739219|ref|ZP_02146631.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387619|gb|EDQ11976.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 250

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I + +F +G+++ LF     + +     +   LL I T +I  +P LVLI + Y +  
Sbjct: 36  LQIALGAFGMGLIIGLFG-AYGKLYGGPILRD--LLAIYTTVIRAVPELVLILILYYVGT 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D       +   G       ++    L     A+  E++R  + AVP GQ+EAA + G+ 
Sbjct: 93  DLINKVAGSLGYGRVEISGIVAGIWVLGIVQGAYATEVLRGAIKAVPPGQIEAARSYGMP 152

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M    P L + +L   K+++L   VGFA+L        + T      
Sbjct: 153 PFMTMRRVTIPAMMSFATPGLANLWLIATKDTALLAIVGFAELTLETRQAASSTRAYFTF 212

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L    +YL +++  ++    +  
Sbjct: 213 FLAAGALYLMITLCSSVIFGWIER 236


>gi|330960458|gb|EGH60718.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. maculicola str. ES4326]
          Length = 232

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + M   N  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNMIWENLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNLP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A S  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFSINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     TI  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTINAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|325062129|gb|ADY65819.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 230

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 18/199 (9%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            +LG+V +L      +     T        +    +   P LV +   Y       VL +
Sbjct: 42  LILGLVFALLRRSRVKLISWPTA-------VVVEFLRDTPLLVQLFFLYY------VLPE 88

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F  +      P F++  +AL    AA+ +E+ R G+ AV  GQ EAA AL LT  +  R 
Sbjct: 89  FGIV-----LPAFLTGALALGLQYAAYTSEVYRGGMEAVHHGQWEAATALNLTRMQTYRD 143

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQA+  I+P + +  + ++K + +   V   +++ +   I  +T + +  + +   I
Sbjct: 144 IIIPQAIPRIVPAMGNYLVAMIKETPVLSVVTVLEMMGLANMIGERTFEYLVPLTLVGLI 203

Query: 374 YLSLSIMIALFMNRLNAKI 392
           +L L+I+ +  ++RL   +
Sbjct: 204 FLLLTIICSAGLSRLQRAL 222



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 35/74 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    IL+G   T   A +G   A I+G +    R S  KL++W   V VE  R+ P LV
Sbjct: 18  SILPIILIGLTVTLKAAAAGFAIALILGLVFALLRRSRVKLISWPTAVVVEFLRDTPLLV 77

Query: 144 VIFFLYKSVLSVLP 157
            +FFLY  +     
Sbjct: 78  QLFFLYYVLPEFGI 91


>gi|323698678|ref|ZP_08110590.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458610|gb|EGB14475.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 218

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 88/208 (42%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +FV G ++ L    + R             YI  F     P L+ + L +  
Sbjct: 19  WTIGLSLIAFVSGGMVGLLIL-IGRISPRPALSRPARTYIEFF--QDTPLLMQLFLIF-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F            ++  + L+ +T+A++AEI R  + ++  GQ EA  +L 
Sbjct: 74  ---------FGVGLLGFDISPLITAALGLTLFTSAYLAEIWRGCVESIANGQWEAGESLA 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  R V+LPQA+R  +PP     + ++K +++   +GF ++   G  I N T + +
Sbjct: 125 LSRWQQLRFVILPQAVRIAVPPTVGFSVQVVKGTAVTSIIGFMEITKTGSMISNATFRPL 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +  +    Y  +   ++    ++  ++
Sbjct: 185 LVYGMVAVGYFIICYPLSALARQVERRL 212



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 40/107 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +LVG   T  L+    +   ++G L+  GR+S    ++   R Y+E F++ P L
Sbjct: 7   WDIVRHLLVGAAWTIGLSLIAFVSGGMVGLLILIGRISPRPALSRPARTYIEFFQDTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +       I    G+ L               +  
Sbjct: 67  MQLFLIFFGVGLLGFDISPLITAALGLTLFTSAYLAEIWRGCVESIA 113


>gi|160903093|ref|YP_001568674.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga
           mobilis SJ95]
 gi|160360737|gb|ABX32351.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga
           mobilis SJ95]
          Length = 223

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 100/221 (45%), Gaps = 14/221 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L +         ++  FS +LG V+ +      + +  K  + + L+Y   F    +P
Sbjct: 9   NSLPYLLKGTLVTLELTFFSLILGFVVGVII-SFGQLYGNKFLQLIFLIYERVF--RSIP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V++ L +                        ++  I L   ++A+ ++I R  + ++ 
Sbjct: 66  LIVVLFLIFY-----------GLPAIGIRLDPLIASIIGLGLISSAYQSQIFRGAISSIS 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ++AA ++G+   +    ++ PQA+R  +    ++   +LK++S+A A+G  +L+  G
Sbjct: 115 KGQLDAAYSIGMNKIQTFIYIIFPQAIRIALSGWINEASVVLKDTSVAYALGVVELLRQG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             II+ T + + + LI   IY  L+  ++     +  K+ +
Sbjct: 175 TYIISVTNRPLIVYLICGAIYFVLTFSLSRGFGMIEKKLTI 215



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 43/82 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T  L F  +I   ++G ++  G+L  NK +  I  +Y  VFR+IP +VV+F 
Sbjct: 13  YLLKGTLVTLELTFFSLILGFVVGVIISFGQLYGNKFLQLIFLIYERVFRSIPLIVVLFL 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGM 169
           ++  + ++    D  I    G+
Sbjct: 73  IFYGLPAIGIRLDPLIASIIGL 94


>gi|115351109|ref|YP_772948.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|172060113|ref|YP_001807765.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115281097|gb|ABI86614.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|171992630|gb|ACB63549.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 237

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG V ++    ++R    K        Y  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASISLGFVCAVPL-AVARVSKNKWLSMPVRFY--TYVFRGTPLYVQLLLMYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   + +  +     F    +A +  T A+  EI    + A+P G++EAA A G
Sbjct: 82  MYSLEFVRSHSLLD-AFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T     R V+LP A+R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MTPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   IYL++S  +     R    
Sbjct: 201 QSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S NK ++   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWLSMPVRFYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|295096603|emb|CBK85693.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC
           transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 224

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + ++GI+       +      +     PL +
Sbjct: 1   MYDFDWSSIVPSMPYLLDGLAITLKITVIAIIVGIIWGTLLAVM------RLSSFKPLAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +T  +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FATAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLLVSWLKKR 222



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 35/66 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  +    +I   I GTL+   RLS+ K +AW    YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLAITLKITVIAIIVGIIWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|291544977|emb|CBL18086.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus sp. 18P13]
          Length = 216

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 10/191 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R    +  + L   YIS  ++ G P ++ + + Y   +       F F    T    
Sbjct: 36  SFGRMAKFRVLRFLTQFYIS--VMRGTPLMLQLLVVYYGPY-------FIFGIRITNEYR 86

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+++ I      AA+ AEI R G+ ++P GQ EAA  LG +  +    +++PQ ++ IIP
Sbjct: 87  FIAVIIGFVLNYAAYFAEIYRGGIQSIPVGQYEAAKVLGYSRAQCFGRIIMPQVIKRIIP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            LT++ + L+K++SL+ A+   ++ +    I     + +         Y   ++++A  M
Sbjct: 147 ALTNEIITLIKDTSLSFALAVPEMFTTAKAIAAAD-KTMTAFAAAGVFYYVFNLLVAGIM 205

Query: 386 NRLNAKIALKE 396
            ++  K++   
Sbjct: 206 RKVEQKLSYYR 216


>gi|296134851|ref|YP_003642093.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
 gi|294338804|emb|CAZ87138.1| Glutamate/aspartate transport system permease protein gltJ
           [Thiomonas sp. 3As]
 gi|295794973|gb|ADG29763.1| polar amino acid ABC transporter, inner membrane subunit [Thiomonas
           intermedia K12]
          Length = 242

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 9/225 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                LS    T+      +V + VLG VL +      R    +    L   Y+  F   
Sbjct: 18  WGMSLLSGLEYTLLLVVCAWVIAMVLGSVLGVV-----RTTKHRFWVMLGNGYVELF--R 70

Query: 231 GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            +P LV   L Y  L    P L +F          + ++  + L  +TAA IAE V+SG+
Sbjct: 71  NIPLLVQFFLWYFVLPSVIPPLKRFANAVDPGTF-QILTAVVCLGLFTAARIAEQVKSGI 129

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++PRGQ  A +ALGLT  +  R VLLP A R IIPPLTS+ +NL+KNS++A ++G  +L
Sbjct: 130 QSLPRGQTFAGLALGLTPTQTYRYVLLPMAYRIIIPPLTSESMNLVKNSAVAYSIGLTEL 189

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 +   T +          +Y++++  I   M  +    A+
Sbjct: 190 FFRTREMGEMTFRYFAAFGAATVLYVAVAFSINRIMAWVERATAV 234



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 42/88 (47%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
             D+++  ++L G   T  L     + A ++G+++G  R + ++    +   YVE+FRNI
Sbjct: 13  DGDTTWGMSLLSGLEYTLLLVVCAWVIAMVLGSVLGVVRTTKHRFWVMLGNGYVELFRNI 72

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
           P LV  F  Y  + SV+P          
Sbjct: 73  PLLVQFFLWYFVLPSVIPPLKRFANAVD 100


>gi|259907903|ref|YP_002648259.1| Histidine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224963525|emb|CAX55015.1| Histidine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283477780|emb|CAY73696.1| Histidine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
 gi|310768186|gb|ADP13136.1| Histidine transport system permease protein [Erwinia sp. Ejp617]
          Length = 238

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 85/189 (44%), Gaps = 3/189 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               ++R    K  +    +++ T++  G P  V + + Y   +   V+     +  +  
Sbjct: 42  LLLSIARVSPHKAVRF--PVWLFTYVFRGTPLYVQLLVFYSGMYTLEVVKGTELL-NAFF 98

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                   +AL+  T A+  E+    + AVP G++EAA A G +  K  R +++P A+R+
Sbjct: 99  RSGLNCTLLALTLNTCAYTTEVFAGAIRAVPHGEIEAARAYGFSTFKLYRCIIMPSALRT 158

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P  +++ + +L +++LA      DL+ V   I + T Q      I   +YL +S ++ 
Sbjct: 159 ALPAYSNEVILMLHSTALAFTATVPDLLKVARDINSATYQPFIAFGIAAVLYLIISYVLI 218

Query: 383 LFMNRLNAK 391
               +   +
Sbjct: 219 SLFRKAEKR 227


>gi|297584865|ref|YP_003700645.1| polar amino acid ABC transporter inner membrane subunit [Bacillus
           selenitireducens MLS10]
 gi|297143322|gb|ADI00080.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           selenitireducens MLS10]
          Length = 223

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 17/222 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                   LT+        F F++G ++ L     +R    K   A+  +YI T  I G 
Sbjct: 19  PFIWRGLQLTLLVTLTGVFFGFIIGSLVGL-----ARLSKSKILYAIATVYIET--IRGT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV       L+F    +   NF   +           A          EIVR G+ ++
Sbjct: 72  PILVQALF---LYFAVSDVFNINFNAVTAGIIAIAINAGAYIA-------EIVRGGVESI 121

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EA  ++G+   +  R ++ PQA + +IPPL +Q++  LK++S+   +   ++  +
Sbjct: 122 DKGQFEAGRSMGMNGTQTMRYIIWPQAFKRMIPPLGNQFIISLKDTSIFAIISLNEVTYL 181

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               ++ TG      ++    YL ++I   L + R+  ++ +
Sbjct: 182 MRQYVSSTGDPFVPYIMLSMAYLVITIPSMLILRRIERRLDV 223



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 29/52 (55%)

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
               IIG+LVG  RLS +K++  I  VY+E  R  P LV   FLY +V  V 
Sbjct: 37  FFGFIIGSLVGLARLSKSKILYAIATVYIETIRGTPILVQALFLYFAVSDVF 88


>gi|319782219|ref|YP_004141695.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168107|gb|ADV11645.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 219

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M   +              ++ +   VL ++++  A  + R       + L   YI  F 
Sbjct: 1   MTQWSGYFGLILQGALVTIELTLMGSVLALIMAFLAG-MGRVSRFFALRWLATAYIEFF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   Y +           FIG S       +  +AL     A+ AE+VR  
Sbjct: 59  -RGTSIFVQLFWAYFV---------LPFIGISL--TPLQAGVLALGLNVGAYAAEVVRGA 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ R Q EA  AL L   +  R ++LPQA+  ++P   +  + LLK +++   +   D
Sbjct: 107 IQSIGREQYEACTALNLGRWQGMRHIILPQALLVMLPTFGNNAIELLKATAVVSLISLTD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L      +  QTG  +      + IY  L+++I+  +  L  ++A  
Sbjct: 167 LTFQAQVVRAQTGNTLVPFTTILIIYFILALLISWGVRSLERRMARG 213



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 32/69 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G + T  L   G + A I+  L G GR+S    + W+   Y+E FR     V 
Sbjct: 7   YFGLILQGALVTIELTLMGSVLALIMAFLAGMGRVSRFFALRWLATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVL 153
           +F+ Y  + 
Sbjct: 67  LFWAYFVLP 75


>gi|111023725|ref|YP_706697.1| glutamate transport system permease protein GluD [Rhodococcus
           jostii RHA1]
 gi|110823255|gb|ABG98539.1| glutamate transport system permease protein GluD [Rhodococcus
           jostii RHA1]
          Length = 299

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 111/248 (44%), Gaps = 24/248 (9%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS--------------R 209
            L +    +   L+         +  +    + GI  +L A  +S              R
Sbjct: 36  YLVYAALDDKGQLTAAKWDPFLESTSWTTYLIPGIRGTLVAAAVSILLALILGAILGIGR 95

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  + +    +  F    +P L+L+   YQL  +  V          +      ++
Sbjct: 96  LSDHRPVRWVAGGIVELF--RAIPVLILMIFSYQLFAEYEVFK--------SKYLALAAV 145

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L+ Y  + IAEIVR+G+ ++P+GQ EAA+ALG+   +  R +LLPQA+ +++P + S
Sbjct: 146 IVGLTLYNGSVIAEIVRAGINSLPKGQSEAAMALGMRKGQVMRTILLPQAVTAMLPAIIS 205

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q +  LK+S+L   +G+ ++V  G  +    G  +  +++   I + L+  + +   ++ 
Sbjct: 206 QMVVALKDSALGYLIGYVEVVRSGQQLGAFYGNYLPALIVVAIIMIILNYTLTVVATKVE 265

Query: 390 AKIALKEK 397
            ++   +K
Sbjct: 266 KRLRASKK 273



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 79/226 (34%), Gaps = 7/226 (3%)

Query: 59  LGIGFLSERAGFEIDQ----GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLV 114
           LGIG+L   A  +  Q       P+   +S+ T ++ G   T   A   ++ A I+G ++
Sbjct: 32  LGIGYLVYAALDDKGQLTAAKWDPFLESTSWTTYLIPGIRGTLVAAAVSILLALILGAIL 91

Query: 115 GAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           G GRLS ++ V W+    VE+FR IP L+++ F Y+             +    + +   
Sbjct: 92  GIGRLSDHRPVRWVAGGIVELFRAIPVLILMIFSYQLFAEYEVF-KSKYLALAAVIVGLT 150

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +   +     A I                R  +              +   +   +  
Sbjct: 151 LYNGSVIAEIVRAGINSLPKGQSEAAMALGMRKGQVMRTILLPQAVTAMLPAIISQMVVA 210

Query: 235 LVLIALKYQLHFDKPVL--GQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L   AL Y + + + V    Q     G+ +    +   I +     
Sbjct: 211 LKDSALGYLIGYVEVVRSGQQLGAFYGNYLPALIVVAIIMIILNYT 256


>gi|311280248|ref|YP_003942479.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749443|gb|ADO49195.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 222

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S V+ ++L+L  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELMKGLHTSLTLTVASIVVALILALIFTII---LTLKTPVLVWIVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSLQEYPVLWHLLSEP-WLCAMIALSLNSAAYTTQLFYGAIRAIPD 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGVIYLIVNGLLTLLMRLIERKALAFERR 221



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 34/81 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + ++ A I+  +          ++ WI R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASIVVALILALIFTIILTLKTPVLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           IF +Y        + ++ ++ 
Sbjct: 64  IFLIYYGPGQFPSLQEYPVLW 84


>gi|225868397|ref|YP_002744345.1| transport system membrane protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701673|emb|CAW98991.1| transport system membrane protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 217

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    +  +  + +I + + L+F  P                 +  Y+  S  +AA+I+
Sbjct: 52  YLVRGYVSIMRGVPMIVVLFVLYFGLPYY--------GLELSALLCAYLGFSLVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+ + A+ +GQ EAA ALGL +    + V+LPQA R  IPPL +  ++++K+SSLA 
Sbjct: 104 EVFRASIDAIDQGQWEAARALGLPYISIVKHVILPQAFRIAIPPLGNVVIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++    + L  ++ L
Sbjct: 164 MITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQSFLEKRLRL 215


>gi|238785201|ref|ZP_04629193.1| Histidine transport system permease protein hisQ [Yersinia
           bercovieri ATCC 43970]
 gi|238713879|gb|EEQ05899.1| Histidine transport system permease protein hisQ [Yersinia
           bercovieri ATCC 43970]
          Length = 228

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +L +++ L      +    +      L    T LI G+P LVL+ L +  
Sbjct: 15  VTLELALCSVLLSVIIGLMG-AGGKLSSNRLLSG--LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AVP GQ+EAA A G
Sbjct: 72  LQITLNSVTESLGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPAGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTPSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGAVYLIFTTLSNGVLLWLERRYSQGVKR 225


>gi|323467038|gb|ADX70725.1| Glutamine ABC transporter, permease protein [Lactobacillus
           helveticus H10]
          Length = 217

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +      SFV+G++L L      ++     G          F+I  +  L
Sbjct: 17  LQGLWVTIYVSLISIALSFVVGLILGLIRYMKIKYVSAIVG----------FIIDIIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P L          V+    +   AL  + AA +AEIVRSG+ +V  G
Sbjct: 67  PLLLIIFFTYFGLPQL--------GIVTNPTTASIAALVIFEAAMLAEIVRSGIGSVDPG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + G+++ +A   V++PQA+ ++IP L SQ+++L+K++SLA  +   +L+     
Sbjct: 119 QMEGARSNGMSYGQAMYHVVMPQALHNMIPALLSQFVSLVKDTSLATIIVLPELLYHAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I +Q T   I + +I   +Y  +   ++   N L  K 
Sbjct: 179 IYSQNTTYLIPMYVIIAIMYFVVCFCLSTIANYLQKKY 216



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 36/71 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R    K V+ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLIRYMKIKYVSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|295697367|ref|YP_003590605.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295412969|gb|ADG07461.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 222

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 10/182 (5%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                +   L YI+ F   G P  V I L   LHF            G       +S  I
Sbjct: 49  RGWWWRWPALAYITFF--RGTPLFVQILL---LHFAV-----IPLFNGGRALDAQISGTI 98

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   +AA++AEI R+G+ ++ RGQMEAA +LGL   +A   V+LPQA R ++PPL ++ 
Sbjct: 99  ALLLNSAAYVAEIFRAGIQSIDRGQMEAARSLGLRAGQAMLYVILPQAFRRMLPPLGNEA 158

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + LLK+SSL   +   ++ +    +  +     E  L   F+YL L++++   +  L  +
Sbjct: 159 IALLKDSSLLAVIAGGEIATQMNLMFGRILSPWEPFLTLAFVYLVLTLVLQQVVAYLERR 218

Query: 392 IA 393
             
Sbjct: 219 YG 220


>gi|320010631|gb|ADW05481.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces flavogriseus ATCC 33331]
          Length = 214

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 22/207 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + + VLG+ +++     SR                T  +   P LV +     L  
Sbjct: 29  VLGTLVAAVLGLAVAVAGRAPSRFVTVPVKAV-------TEFVRATPLLVQLVGAAALF- 80

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                         T         + L  + AA+ +E+ R+G+  VP+GQ EA  AL ++
Sbjct: 81  --------------TSVEPLTIGIVVLGIHYAAYTSEVYRAGIDGVPKGQWEACRALSMS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  + V+LPQA+R+++P L +  +++ K +     +   ++V              E 
Sbjct: 127 PRRTWQAVILPQAVRNVLPALGNYAISMFKETPFLAVITVHEMVFEARAYGADHFAYTEA 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   ++L  S   +L M +L  ++ 
Sbjct: 187 FTLAGLVFLVASYPTSLLMRKLEKRLG 213



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 28/80 (35%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + +       +L GF  T      G + A ++G  V     + ++ V    +   E  R
Sbjct: 6   DWDAAGDALPLLLEGFRVTLLATVLGTLVAAVLGLAVAVAGRAPSRFVTVPVKAVTEFVR 65

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
             P LV +        SV P
Sbjct: 66  ATPLLVQLVGAAALFTSVEP 85


>gi|227822265|ref|YP_002826236.1| predicted amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227341265|gb|ACP25483.1| predicted amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 267

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 2/212 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A + + +  +G+ +  F   L++   E++ +    +Y + F       L L  + Y L
Sbjct: 55  VTASLAIATLPIGLAIGFFI-ALAKQSPERSLRLSANIYTTIFRGL-PELLTLFIVYYGL 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F++  IAL    +A+ +E++ S   A+P+GQ EA  ALG
Sbjct: 113 QILVQQFLATLGYEEPVEINAFVAGMIALGVVFSAYCSEVLLSAFKAIPQGQYEAGDALG 172

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
               K  RL++LPQ +R  +P L + ++ LLK+++L   +G  D++   G     T QA 
Sbjct: 173 FHRGKTMRLIILPQLVRIALPGLGNLWMALLKDTALVSVIGLQDILRQTGQAARMTKQAF 232

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +   ++L L+++ ++  + L       E
Sbjct: 233 QFFGVACVLFLVLAMISSVVFSALERSTKRAE 264



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 8/159 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           DS +   I  GF+ T  LA + +     IG  +   + S  + +     +Y  +FR +P 
Sbjct: 42  DSGWGDEIAYGFLVTASLAIATLPIGLAIGFFIALAKQSPERSLRLSANIYTTIFRGLPE 101

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ +F +Y  +  ++     ++     + +N              A   VFS     VL 
Sbjct: 102 LLTLFIVYYGLQILVQQFLATLGYEEPVEIN-------AFVAGMIALGVVFSAYCSEVL- 153

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           L A +       + G AL      T  +  LP LV IAL
Sbjct: 154 LSAFKAIPQGQYEAGDALGFHRGKTMRLIILPQLVRIAL 192


>gi|282932376|ref|ZP_06337807.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 208-1]
 gi|297206408|ref|ZP_06923803.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus jensenii JV-V16]
 gi|281303490|gb|EFA95661.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 208-1]
 gi|297149534|gb|EFH29832.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein YckJ [Lactobacillus jensenii JV-V16]
          Length = 225

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 13/187 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  K     Y+  F     P LV + + +                       + +
Sbjct: 52  KKSLWQLLKGFFTFYVWIF--RSTPLLVQLFIVFY-----------GLPSIGIQLGAWTA 98

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +  S  T A+ +E +R+ + +VP+ Q EAA ++GLT+RK    V+ PQA+R  IPPL+
Sbjct: 99  GILTFSLNTGAYASETIRASISSVPQDQWEAAYSIGLTYRKVLSRVIFPQAVRIAIPPLS 158

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + ++ L+K++SLA ++   ++  V   I +   Q + +  I   IY     +++L    L
Sbjct: 159 NSFIGLVKDTSLASSITLVEMFMVSQEIASHNYQPMIMYSIVAIIYAIFCSLLSLLQLYL 218

Query: 389 NAKIALK 395
             +  +K
Sbjct: 219 ERRFEVK 225


>gi|83747886|ref|ZP_00944918.1| Hypothetical Protein RRSL_03142 [Ralstonia solanacearum UW551]
 gi|207739276|ref|YP_002257669.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725419|gb|EAP72565.1| Hypothetical Protein RRSL_03142 [Ralstonia solanacearum UW551]
 gi|206592649|emb|CAQ59555.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 233

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 5/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N                I   S++L +VL+     + R    +  +     Y+S      
Sbjct: 12  NPEFSRMLIEGGWMTLVIAGSSWLLAMVLAFVLLGI-RMVRARPAEHFVEAYVS--YHCN 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +PTLV +   Y        L   +++  +    E +   +AL    AA+ +E +RSGL A
Sbjct: 69  VPTLVQLMFWYFGISTLFPLPMLDWL--ADHHSEAVFSIVALGLCQAAYFSEDLRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ EAA ALG +     R VL+PQA+R+ +P L +  ++L KNSSLA+A+G  +L  
Sbjct: 127 IPPGQEEAARALGNSFIGTLRYVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVTELTH 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I N + +A E  L+   +YL  S++I      L  +  +   +
Sbjct: 187 AVKEIENTSFRAFESYLLATVMYLGFSLVIMAAGAVLARRFRVVTGR 233



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 38/91 (41%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
              ++   ++  ++  ++ G   T  +A S  + A ++  ++   R+   +        Y
Sbjct: 3   GFDLMAILNNPEFSRMLIEGGWMTLVIAGSSWLLAMVLAFVLLGIRMVRARPAEHFVEAY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           V    N+P LV + F Y  + ++ P+P    
Sbjct: 63  VSYHCNVPTLVQLMFWYFGISTLFPLPMLDW 93


>gi|238790775|ref|ZP_04634534.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia frederiksenii ATCC 33641]
 gi|238721133|gb|EEQ12814.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia frederiksenii ATCC 33641]
          Length = 246

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+ + +      +     QF           F+S
Sbjct: 65  GTCYVELFRNVPLIVQFFTWYLVVPELLPVDIGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITIGYVLINAVIMLLMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP
Sbjct: 53  LRTVPNRILSGIGTCYVELFRNVPLIVQFFTWYLVVPELLP 93


>gi|238026229|ref|YP_002910460.1| hypothetical protein bglu_1g05600 [Burkholderia glumae BGR1]
 gi|237875423|gb|ACR27756.1| Hypothetical protein bglu_1g05600 [Burkholderia glumae BGR1]
          Length = 246

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 109/241 (45%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P         L +         K+ + ++V+ +V+      L R    +
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVL-RTVPNR 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              AL  LY+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSALGTLYVSIF--RNIPLIVQFFVWYLVVPELLPPALGTWIKQLPPGTQFFTASVVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P+GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGIAALPKGQRAAGLAMGFTEWQTYRFVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++   M  + ++  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVIINLVVMALMRWIESRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L GF  T  ++    + A ++G+L G  R   N+ ++ + 
Sbjct: 7   WGIFLSPVSTGEPTTYLGWLLSGFWVTIKVSLVAWVIALVVGSLFGVLRTVPNRWLSALG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            +YV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TLYVSIFRNIPLIVQFFVWYLVVPELLPPALGTWI 101


>gi|297198908|ref|ZP_06916305.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|197711171|gb|EDY55205.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 296

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 98/205 (47%), Gaps = 6/205 (2%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
              V G+ + +    ++     +     PL +++         L LI     +    P L
Sbjct: 92  LLLVCGVAVLVLGMLIAIARTLRGPVFFPLRFLAAAYTDFFRGLPLIINLMIVVLGVPAL 151

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                + G TV P  +    AL+   +A++AE+ R+G+ +V   Q  AA +LGL++R+A 
Sbjct: 152 R----LQGVTVDPVLLGGT-ALTLTYSAYVAEVFRAGIESVHPSQRAAARSLGLSNRQAL 206

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA+R  +PPL +  ++L K++ L    G  D V     I+ ++       ++  
Sbjct: 207 RYVVLPQAVRRQVPPLLNDLVSLQKDTGLVSIGGAIDAVRAADIIVGRSLNYTP-YIVAG 265

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            ++++L+I +  F + + A++  + 
Sbjct: 266 LVFVALTIPMTRFTDWVTARMDRRR 290



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA---NKLVAWICRVYVEVFRNIPPLVVIF 146
           L G      L     +   ++G L+   R         + ++   Y + FR +P ++ + 
Sbjct: 83  LEGLWLNVRLLLVCGVAVLVLGMLIAIARTLRGPVFFPLRFLAAAYTDFFRGLPLIINLM 142

Query: 147 FLYKSVLSVLPIPDHSIVLPFG 168
            +   V ++         +  G
Sbjct: 143 IVVLGVPALRLQGVTVDPVLLG 164


>gi|161525298|ref|YP_001580310.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189349964|ref|YP_001945592.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221201396|ref|ZP_03574435.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|221208877|ref|ZP_03581875.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221214042|ref|ZP_03587015.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|160342727|gb|ABX15813.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189333986|dbj|BAG43056.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221166219|gb|EED98692.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD1]
 gi|221171333|gb|EEE03782.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2]
 gi|221178664|gb|EEE11072.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia multivorans CGD2M]
 gi|325524871|gb|EGD02818.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Burkholderia sp. TJI49]
          Length = 237

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG V ++    ++R   +K        Y  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASISLGFVCAVPL-AVARVSKKKWVSMPVRFY--TYVFRGTPLYVQLLLMYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   + +  +     F    +A +  T A+  EI    + A+P G++EAA A G
Sbjct: 82  MYSLEFVRSHSLL-DAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T     R V+LP A+R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MTPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   IYL++S  +     R    
Sbjct: 201 QSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  K V+   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKKKWVSMPVRFYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|255326763|ref|ZP_05367839.1| L-cystine transport system permease protein TcyB [Rothia
           mucilaginosa ATCC 25296]
 gi|255295980|gb|EET75321.1| L-cystine transport system permease protein TcyB [Rothia
           mucilaginosa ATCC 25296]
          Length = 267

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +  LY+  F       LV  A  Y +     +    N I           
Sbjct: 85  RISSIAPYRWIATLYVELFRGIPA-LLVFFAFGYGIPLAFKIRFVDNLIP---------- 133

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + ++L   +AA+I+E++R+GL A+P+GQMEAA +LG++H +A   +++PQA R ++PPLT
Sbjct: 134 VTLSLGMVSAAYISEVLRAGLQAIPKGQMEAARSLGMSHTRAMISIIIPQAFRVVLPPLT 193

Query: 329 SQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           ++ + L K+SSL   +G      +L   G   +      +  +++    YL +++ +   
Sbjct: 194 NEVILLTKDSSLVYLLGVTVSQYELAKFGREGLTAANAGLTPLVVAGLCYLIITVPLGQL 253

Query: 385 MNRLNAKIALKEKK 398
                 +  L  +K
Sbjct: 254 SAYFERRTQLAGRK 267



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 36/89 (40%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +   +   I V   NT      G I     G L+   R+S+     WI  +YVE+FR IP
Sbjct: 48  AAQQFPDVITVALKNTLLYTTLGFIVGLSGGLLLALMRISSIAPYRWIATLYVELFRGIP 107

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            L+V F     +     I     ++P  +
Sbjct: 108 ALLVFFAFGYGIPLAFKIRFVDNLIPVTL 136


>gi|51595218|ref|YP_069409.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|153949446|ref|YP_001402148.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|170025544|ref|YP_001722049.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894235|ref|YP_001871347.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|51588500|emb|CAH20108.1| putative amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|152960941|gb|ABS48402.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|169752078|gb|ACA69596.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697261|gb|ACC87890.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 217

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   +    L       + + +F  G +++L    L R  H +       LY   F  
Sbjct: 3   FTDWDIIRNLLLAARWTLLLSLTAFFGGTLVTLPLM-LMRLSHWRWAARFVRLYTELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+AF+ +I    +
Sbjct: 60  QGTPLLMQLFLAF-----------FGLALFGIDVSPWTAAAMALTLFTSAFLVDIWCGSI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+  LGL+  +    V+ PQAMR  I P     + ++K ++LA  +GF +L
Sbjct: 109 AALPKGQWEASRCLGLSFHQTLFRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVEL 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ + + L  K 
Sbjct: 169 TKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSRYSHYLEKKF 211



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 32/88 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +     T++   +   RLS  +  A   R+Y E+F+  P 
Sbjct: 5   DWDIIRNLLLAARWTLLLSLTAFFGGTLVTLPLMLMRLSHWRWAARFVRLYTELFQGTPL 64

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L+ +F  +  +                +
Sbjct: 65  LMQLFLAFFGLALFGIDVSPWTAAAMAL 92


>gi|167563476|ref|ZP_02356392.1| histidine transport system permease protein [Burkholderia
           oklahomensis EO147]
 gi|167574437|ref|ZP_02367311.1| histidine transport system permease protein [Burkholderia
           oklahomensis C6786]
          Length = 237

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 88/219 (40%), Gaps = 4/219 (1%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +     + V S  +G + ++    ++R    +        Y  T++  G 
Sbjct: 13  FYWDGQRMSGLAVTLWLLVASLAIGFLCAVPL-AVARVSKNRWLSTPVRFY--TYVFRGT 69

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P  V + L Y   +    +    F+  +     F    +A +  T A+  EI    + A+
Sbjct: 70  PLYVQLLLIYTGMYSLAFVRDHAFLD-AFFRSGFNCAILAFALNTCAYTTEIFAGAIRAI 128

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P G++EAA A G++     R V+LP ++R  +P  +++ + +L  +++A      D++ V
Sbjct: 129 PHGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTATVPDILKV 188

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                + T  A +   I   IYL++S  +     R    
Sbjct: 189 ARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 35/79 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    +    +   R+S N+ ++   R Y  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVASLAIGFLCAVPLAVARVSKNRWLSTPVRFYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + S+  + DH+ +  F 
Sbjct: 80  TGMYSLAFVRDHAFLDAFF 98


>gi|317506458|ref|ZP_07964259.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
 gi|316255219|gb|EFV14488.1| extracellular solute-binding protein, family 3 [Segniliparus
           rugosus ATCC BAA-974]
          Length = 508

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            ++          T  ++   S VL +   +     ++       +    +++       
Sbjct: 285 WHKYGHRIEQAFATTVQLTSASAVLALAWGVLLVA-AQLCPVPVLRRSASVFVDVLRNSP 343

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L TLV++     L+ +  +               F    + L+ YT+AF+A+ +RSG+  
Sbjct: 344 L-TLVIVFCSTGLYQNLGLTLASERSPTFISDNNFWLAVLGLAAYTSAFVADALRSGVNT 402

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ+EAA +LG    K  RL++LPQA R++I PL SQ++ L +N+++A A+G A+   
Sbjct: 403 VPIGQVEAARSLGFGFTKVLRLIVLPQAFRAVIRPLGSQFIALARNTTVASAIGVAEAAL 462

Query: 352 VGG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    I N++ +  E+  ++  ++ + S++     N L  K+ ++ 
Sbjct: 463 LMKEMIENESDRLFEVFGVFALVFGAFSVLFGFLFNVLGRKLEVRR 508



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 42/103 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I   F  T  L  +  + A   G L+ A +L    ++     V+V+V RN P  +V
Sbjct: 288 YGHRIEQAFATTVQLTSASAVLALAWGVLLVAAQLCPVPVLRRSASVFVDVLRNSPLTLV 347

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I F    +   L +   S   P  +  NN  L+   L   T+A
Sbjct: 348 IVFCSTGLYQNLGLTLASERSPTFISDNNFWLAVLGLAAYTSA 390


>gi|284802184|ref|YP_003414049.1| hypothetical protein LM5578_1940 [Listeria monocytogenes 08-5578]
 gi|284995326|ref|YP_003417094.1| hypothetical protein LM5923_1891 [Listeria monocytogenes 08-5923]
 gi|284057746|gb|ADB68687.1| hypothetical protein LM5578_1940 [Listeria monocytogenes 08-5578]
 gi|284060793|gb|ADB71732.1| hypothetical protein LM5923_1891 [Listeria monocytogenes 08-5923]
          Length = 221

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 15/225 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      L        T   +FV + V  I L       +     K      +L I  ++
Sbjct: 9   MDYIMEILPALLDGAKTTLLVFVVTLVCSIPLGAVVAVGN---ISKIAPLKFILNIYIWI 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P L+ +   Y   +  P++          V     +++IA     AA+ AEI R G
Sbjct: 66  MRGTPLLLQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGG 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
            +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  D
Sbjct: 115 FLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGD 174

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+  G   +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 175 LLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQLEKRFS 218



 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 15  ILPALLDGAKTTLLVFVVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 75  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 103


>gi|187479526|ref|YP_787551.1| L-amino acid ABC transporter permease [Bordetella avium 197N]
 gi|115424113|emb|CAJ50666.1| L-amino acid ABC transporter, permease protein [Bordetella avium
           197N]
          Length = 366

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 24/268 (8%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
             +R I  L+ +  L    + +         +    F+ N       LT+  +     F+
Sbjct: 120 RFWRPILALIWVVGLSLVAILMWGG------VFGLTFVENSRWGGLPLTLILSTFGIAFA 173

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F +G++L+L      R  +    KAL ++YI       L +L+ ++           +  
Sbjct: 174 FPIGVLLAL-----GRRSNMPAIKALCVVYIELIRGVPLISLLFMS----------SVML 218

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
             F+       + +   IA+  + AA+IAE VR GL A+ +GQ E A +LGL++ +  R 
Sbjct: 219 PLFLPEGFSIDKLLRAQIAIILFAAAYIAETVRGGLQAISKGQYEGADSLGLSYWQKMRK 278

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIW 370
           ++LPQA++ +IPPL S ++ L K++SL V +G  DL       ++     G  IE  L  
Sbjct: 279 IILPQALKVVIPPLVSIFIALFKDTSLVVIIGIFDLTLAAKAALSDAAWRGFGIEAYLFI 338

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             IY      ++ +   L  ++A   ++
Sbjct: 339 SLIYFVFCFSMSKYSQHLERRLATGHQR 366


>gi|26987805|ref|NP_743230.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|24982502|gb|AAN66694.1|AE016297_8 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 223

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 7/230 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          L      M    K+ V   + GIVL      L R    K    L   Y+
Sbjct: 1   MEMDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTIL-ALMRLSSSKLLSNLAGAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F      ++ L+ +    +   P + ++   G  T    F S  +A   + AA+  EI
Sbjct: 60  NYFR-----SIPLLLVITWFYLAVPFVLRW-ITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++ +GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   V
Sbjct: 114 VRAGVQSISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D ++   +  +  G++ E ++    +Y  +S   +  + RL  +I++
Sbjct: 174 GLVDFLNSARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRISV 223



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++       A+  G V T  L   G+I   ++GT++   RLS++KL++ +   YV  F
Sbjct: 3   MDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVNYF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R+IP L+VI + Y +V  VL                               
Sbjct: 63  RSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113


>gi|209966387|ref|YP_002299302.1| general L-amino acid transport system permease protein AapM
           [Rhodospirillum centenum SW]
 gi|209959853|gb|ACJ00490.1| general L-amino acid transport system permease protein AapM
           [Rhodospirillum centenum SW]
          Length = 365

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYIS 225
           MF    GL +          + +   V+G+ ++        L R       KA+ ++YI 
Sbjct: 140 MFGGFAGLDYVPTARWGGLPLTLALAVVGLAVAFPFSILLALGRTGDLPVVKAICVVYIE 199

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                      LI++ +      P+     F+       + +   + L  + AA++AE+V
Sbjct: 200 AVRGVP-----LISILFMASVMFPL-----FLPQGVTVDKLLRAQVGLILFAAAYLAEVV 249

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL A+P+GQ EAA ALGL++ + TRL++LPQA+  +IPPL + ++   K++SL + +G
Sbjct: 250 RGGLQAIPKGQYEAAAALGLSYWQRTRLIILPQALGLVIPPLVNTFIGFFKDTSLVIIIG 309

Query: 346 FADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             DL+S   T +      G   E  L    IY +    ++ +   L    +   ++
Sbjct: 310 LMDLLSTAKTALTDPAWRGFYKEAYLFVAAIYFTFCFALSRYSMHLERTFSQGRRR 365


>gi|49082008|gb|AAT50404.1| PA4194 [synthetic construct]
          Length = 233

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 21/220 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLI 238
             A   VF+  L ++++L      R        + ++ + +PLL    F  F  P  +  
Sbjct: 28  LAAVTLVFAVPLAMLVALLRLAPFRALQWLGFAYVESIRNVPLLAHMLFWYFAAPEWLPE 87

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            LK  L+                 + E  S  +AL+ YTAAF++E +RSG+ AVP  Q+E
Sbjct: 88  DLKAWLYAG---------------NIEAASAIVALTLYTAAFMSEDMRSGIRAVPTVQLE 132

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALG  +  + RLV+LPQA+R  +PPL SQ LNL KN+S+A  +G A+L+   G + +
Sbjct: 133 AARALGFGYLASMRLVILPQALRITVPPLISQTLNLWKNTSIATVIGVAELMYQAGQVES 192

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            T ++ E        YLS+S++I         +    E++
Sbjct: 193 STFRSFESFAFATAAYLSVSLLITGAAAWYQQRYPGVERR 232



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ G + +  LA   ++ A  +  LV   RL+  + + W+   YVE  RN+P 
Sbjct: 11  RGQYHEMLVAGLLLSLKLAAVTLVFAVPLAMLVALLRLAPFRALQWLGFAYVESIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPI 158
           L  + F Y +    LP 
Sbjct: 71  LAHMLFWYFAAPEWLPE 87


>gi|28870093|ref|NP_792712.1| glutamine ABC transporter permease [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28853339|gb|AAO56407.1| glutamine ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 246

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L Y +T  ++ +  + L+ + +  +F  P+L   N  G       F ++   L
Sbjct: 53  RVSPWRWLRYPATVWVYVMRGIPLLMVIFWTYFLVPLLIGHNITG-------FTTMLCTL 105

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             Y +A++ EI+   + A+P GQ EA+ ALG+ + + T  V+LPQA+ + +P L SQ+++
Sbjct: 106 VVYQSAYLCEIISGAIQALPAGQYEASRALGMGYLRTTVWVILPQALYNALPSLISQFIS 165

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++K +SL   +   ++      I NQ   +  ++  I    Y  L   +      +  +I
Sbjct: 166 IIKETSLGYVINVQEVTFAANQINNQLLTKPFQVFFILAITYYVLCYGLTRLAAVVEQRI 225

Query: 393 ALKE 396
           A K 
Sbjct: 226 ARKR 229


>gi|220920917|ref|YP_002496218.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219945523|gb|ACL55915.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 236

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 19/233 (8%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            +  +L  G F N   L    +T+         +FV+G +++L           +T    
Sbjct: 7   SNWQLLLIGQFPNGP-LGGLAMTLILAVSAIAAAFVIGTLIALA----------RTSGHA 55

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L + +T L++ +  L  +   +  +F  P L            P F +L  AL  Y +A
Sbjct: 56  VLQWPATVLVYVVRGLPPVMAVFWAYFALPALIG-------RPIPGFWTLLAALILYESA 108

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI+R+G+ A+P+GQ EA+ ALG+ + + TR ++LPQ   +++P + SQ+++ +K +S
Sbjct: 109 YLSEILRAGIRALPKGQFEASRALGMGYLQTTRDIVLPQVYYTMLPSMVSQFVSTIKETS 168

Query: 340 LAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L   +   +L      + +Q   +  E+ ++   IY ++   +      L  +
Sbjct: 169 LGYIIAVQELTFATNQLNSQLLTRPFEVFMLLAVIYFAVCSTLTSGARLLERR 221



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 39/75 (52%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  LA S +  A +IGTL+   R S + ++ W   V V V R +PP++ +F+ Y
Sbjct: 22  LGGLAMTLILAVSAIAAAFVIGTLIALARTSGHAVLQWPATVLVYVVRGLPPVMAVFWAY 81

Query: 150 KSVLSVLPIPDHSIV 164
            ++ +++  P     
Sbjct: 82  FALPALIGRPIPGFW 96


>gi|330431657|gb|AEC16716.1| arginine transporter permease subunit ArtQ [Gallibacterium anatis
           UMN179]
          Length = 223

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 4/175 (2%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   L+ GLP ++++ L +        L    +I  S     F    +AL+   AA+ ++
Sbjct: 51  IIVTLLRGLPEILVVLLIFFGSTQVLFLLTEEYIEFS----AFWCGSVALAIIFAAYASQ 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R  + A+P GQ E+  ALGL+  +    +++PQ  R  +P L++Q+L LLK+++L   
Sbjct: 107 SLRGAIQAIPVGQWESGAALGLSRAQTFVRIIMPQVWRHALPGLSNQWLVLLKDTALVSL 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  DL+     +   T Q      I   +YL ++++    + +L+      E++
Sbjct: 167 IGVDDLMRQAELVNASTHQPFTWYGIAALLYLVITLISQAGIRKLDLYFTRFERE 221


>gi|260769234|ref|ZP_05878167.1| arginine ABC transporter permease protein ArtQ [Vibrio furnissii
           CIP 102972]
 gi|260614572|gb|EEX39758.1| arginine ABC transporter permease protein ArtQ [Vibrio furnissii
           CIP 102972]
          Length = 229

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 4/170 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I GLP L+++   Y        L    FI  S     F+S  IALS   A++ A+ +
Sbjct: 54  VMVIRGLPELLVVLFIYFGSTQVLFLITGEFIEIS----PFISGVIALSLIFASYAAQTL 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  L AV RGQ EAA ALG++  +A   ++LPQA+R  +P L +Q+L LLK+++L   +G
Sbjct: 110 RGALKAVGRGQREAASALGISPGRAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIG 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             DL+         T +A         +YL ++++    +  ++ K A++
Sbjct: 170 VTDLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDKKFAVQ 219


>gi|154502490|ref|ZP_02039550.1| hypothetical protein RUMGNA_00303 [Ruminococcus gnavus ATCC 29149]
 gi|153796886|gb|EDN79306.1| hypothetical protein RUMGNA_00303 [Ruminococcus gnavus ATCC 29149]
          Length = 215

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 99/218 (45%), Gaps = 12/218 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L   T        IF  + +  + L +      R    K    +  +YIS  ++ G P 
Sbjct: 6   MLRQMTAGFGQTCLIFFMTLIFSLPLGMLVY-FGRVSRIKPISWIVKIYIS--IMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ + + Y   F    L Q N  G      +  ++ +  S   AA+ AEI RSG+ ++P+
Sbjct: 63  MLQLLVWY---FAPYYLWQMNIGGY-----KLTAILLGCSLNYAAYFAEIYRSGIESIPK 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG +  +    ++LPQ +++++P +T++ + L+K++SL  ++ + ++ +V  
Sbjct: 115 GQYEAATLLGYSRGQTFFRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I       +    I    Y   + ++A  M     K+
Sbjct: 175 QIAAA-QTTVLPFFIAGVYYYIFNYVVAGVMELFEKKL 211



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 36/73 (49%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  GF  T  + F  +I +  +G LV  GR+S  K ++WI ++Y+ + R  P ++ +
Sbjct: 7   LRQMTAGFGQTCLIFFMTLIFSLPLGMLVYFGRVSRIKPISWIVKIYISIMRGTPLMLQL 66

Query: 146 FFLYKSVLSVLPI 158
              Y +   +  +
Sbjct: 67  LVWYFAPYYLWQM 79


>gi|83717299|ref|YP_439606.1| histidine ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|167578034|ref|ZP_02370908.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis TXDOH]
 gi|167616165|ref|ZP_02384800.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia thailandensis Bt4]
 gi|257142743|ref|ZP_05591005.1| histidine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
 gi|83651124|gb|ABC35188.1| histidine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 229

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +   ++   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTIETVKLAVLSLAASLVLGLAGAA-AKLSSNRALASVGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNNATDMLGIDQIDIDPFVAGVLTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++ PQ MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMGSWRVFARIMFPQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  + +  L  + +   ++
Sbjct: 188 TLNFFFFTLAAGAIYLAITTLSNVVLMYLEKRYSAGVRR 226


>gi|89072734|ref|ZP_01159299.1| putative ABC-type arginine transport system, permease component
           [Photobacterium sp. SKA34]
 gi|89051554|gb|EAR57008.1| putative ABC-type arginine transport system, permease component
           [Photobacterium sp. SKA34]
          Length = 246

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------------- 242
               L++    +  +A+  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKLSPYRWARAIATLY--TTVIRGIPDLVLMMLIFFGGQMLLNDSLYNINEWVNN 91

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F +  + +     A++AE  R  ++AV +G++EA  A
Sbjct: 92  YFTQSDPTHEWTSYLPDYIEISPFFAGILTIGFIFGAYMAETFRGAILAVDKGELEAGKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  +P   + +L LLK ++L   +G  D+V  G      T +
Sbjct: 152 YGMSAFLSFRRILLPQMVRHALPGFGNNWLVLLKTTALVSIIGLDDMVRKGALAAGTTQK 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                     ++L  + +  L +N    K ++  +
Sbjct: 212 PFTFYFTIAVVFLIFTSISTLALNWAERKYSIPTR 246



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  ++  G + T  +A   ++ A  +G L    +LS  +    I  +Y  V R IP LV+
Sbjct: 7   YGWSLAQGAMITIQVALLSLLLAATLGMLGALAKLSPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + ++    ++              L          A I    F+ 
Sbjct: 67  MMLIFFGGQMLLNDSLYNINEWVNNYFTQSDPTHEWTSYLPDYIEISPFFAGILTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|255525600|ref|ZP_05392534.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296185487|ref|ZP_06853897.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255510690|gb|EET86996.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296050321|gb|EFG89745.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 221

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F              ++    +I + S V  ++LS+    + R++       L  +YI
Sbjct: 1   MNFDFQWFINLFPIVLPSLKLTIEISLVSLVFTLLLSIVI-SIVRYYKVWGISQLFGVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F         L+A  + L+F  P +     I        F +  +AL+  TA+F+AE 
Sbjct: 60  TFFRATP-----LVAQLFILYFGLPCV-----IPALKSMTAFQATVVALTLNTASFMAET 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ L +V  GQ+EA  ++ +T  +    V+LPQA    +P L +Q++ ++K S+L   V
Sbjct: 110 LRAALESVEVGQLEACYSMSMTKYQTMMRVVLPQAFVVALPSLGNQFIGIIKGSALGFTV 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G AD+++        T +  E  L    IYL + I +      L  +I
Sbjct: 170 GLADIMAKAKMEAALTLRFFEAYLCVTLIYLVIVIFVEKIQRLLEKRI 217



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L     T  ++   ++   ++  ++   R      ++ +  VY+  FR  P +  +F LY
Sbjct: 16  LPSLKLTIEISLVSLVFTLLLSIVISIVRYYKVWGISQLFGVYITFFRATPLVAQLFILY 75

Query: 150 KSVLSVLPIPDHSIVLP 166
             +  V+P         
Sbjct: 76  FGLPCVIPALKSMTAFQ 92


>gi|295836792|ref|ZP_06823725.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB74]
 gi|197697534|gb|EDY44467.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB74]
          Length = 246

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 13/226 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +                 +    +  V+  +L  VLS     + R  +    + L  + +
Sbjct: 1   MGDFFSYFFDHFDQVGSGLWLTVQATVYGALLAFVLSFAFGFMGRSGYT-VVRGLSRVIV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G    + +   + L++  P L  +                +A      A+ +E+
Sbjct: 60  EFF--RGTSLYIQL---FWLYYALPPLTGYEL-------SALFCGVVAFGLNYGAYGSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L AVPR Q EAA+AL L+  +  R V+LPQA   +IP LTS  + LLK + L   +
Sbjct: 108 VRGALNAVPRAQFEAAVALNLSPFQRMRRVILPQAWVQMIPSLTSLLIMLLKATPLLWLI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             ADL  V   + ++TG  +   L  + +Y  L+ ++ L MN L  
Sbjct: 168 SAADLTQVVQAMRDRTGATVPAYLTLLVMYFVLAYLLTLAMNALER 213



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T      G + A ++    G    S   +V  + RV VE FR     + +F+LY +
Sbjct: 18  GLWLTVQATVYGALLAFVLSFAFGFMGRSGYTVVRGLSRVIVEFFRGTSLYIQLFWLYYA 77

Query: 152 VL 153
           + 
Sbjct: 78  LP 79


>gi|170703223|ref|ZP_02894027.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170131873|gb|EDT00397.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 237

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG V ++    ++R   +K        Y  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASISLGFVCAVPL-AVARVSKKKWLSMPVRFY--TYVFRGTPLYVQLLLMYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   + +  +     F    +A +  T A+  EI    + A+P G++EAA A G
Sbjct: 82  MYSLEFVRSHSLLD-AFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T     R V+LP A+R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MTPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   IYL++S  +     R    
Sbjct: 201 QSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 30/72 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  K ++   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKKKWLSMPVRFYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|152994193|ref|YP_001339028.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835117|gb|ABR69093.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 452

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 69/313 (22%), Positives = 137/313 (43%), Gaps = 30/313 (9%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA--NKLVAWICRVYVEVFRNIPPLVVIF 146
           ++ G +    LAF  +I A  I + +G   L+     LV+ +    + +   +   +++ 
Sbjct: 165 LVHGAMTCLALAFLAIIYANWILSALGKKGLNELFVPLVSRLVERRIHLLGFVAVWLLVA 224

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
            +  S LS + +    I    G+FL      F              +  +G++L+L    
Sbjct: 225 LVIASGLSQVSLEPVPIERWGGLFLTFIIAGF----------AITMAIPVGVILAL---- 270

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R         L +  I       L T++ +A+   L    P   +FN         + 
Sbjct: 271 -GRRSKLPVIHWLSMTVIELVRSVPLITVLFMAVT-LLPIFLPADMEFN---------KL 319

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
             + +A+  +  A++AE +R GL A+P+GQ EAA  LGL +     L++LPQA+R +IP 
Sbjct: 320 TQVLVAVCLFAGAYMAENIRGGLQAIPKGQYEAAATLGLGYLHTMVLIILPQALRMMIPN 379

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIAL 383
           + + +++LLK+++L   +G  D++ +   I N     G   E +++   ++  L   ++ 
Sbjct: 380 IMTSFISLLKDTTLVSIIGLFDIMLMARNIANDKDWVGMHTEPLVMISVLFFILCYSMSQ 439

Query: 384 FMNRLNAKIALKE 396
           +   L  ++ +  
Sbjct: 440 YSLNLEKRLKVDR 452


>gi|226331012|ref|ZP_03806530.1| hypothetical protein PROPEN_04942 [Proteus penneri ATCC 35198]
 gi|225201807|gb|EEG84161.1| hypothetical protein PROPEN_04942 [Proteus penneri ATCC 35198]
          Length = 224

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L F    M    KI + + V+GI+       + R    K        Y
Sbjct: 1   MYEFDWSSVVPSLPFLVDGMAITLKITITAIVVGILWGTVL-AVMRLSTFKPISWFAAAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++TF       LV++ L + L    P + Q             +S  IA S + AA+ +E
Sbjct: 60  VNTFRSIP---LVMVLLWFYL--IVPNILQNVLGLSPKSDIRLISAMIAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V +GQ  A++ALG+T  +  RLV+LPQA R++IP L +Q + L +++SL   
Sbjct: 115 IIRAGIQSVSKGQFSASLALGMTKSQTMRLVILPQAFRAMIPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   D       I  + G  +E+IL   F+Y  +S   ++ +N L  +
Sbjct: 175 LSLTDFFRTAANIGERDGTQVEMILFAGFVYFVISFAASMLVNFLKKR 222



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +  + ++   + GT++   RLS  K ++W    YV  FR+IP ++V+ + 
Sbjct: 16  LVDGMAITLKITITAIVVGILWGTVLAVMRLSTFKPISWFAAAYVNTFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           Y  V ++
Sbjct: 76  YLIVPNI 82


>gi|118473089|ref|YP_889613.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Mycobacterium smegmatis str. MC2 155]
 gi|118174376|gb|ABK75272.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mycobacterium smegmatis str. MC2 155]
          Length = 222

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 96/236 (40%), Gaps = 14/236 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +    L    + +                I   S ++ IVL L    L R    +    
Sbjct: 1   MNTERSLWNWDYAHEVLPGLVAAFFKFTLGITAASSLVAIVLGLVL-VLGRRSGARWISW 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                +    I   P  + +   Y   F  PV+               ++    L  + A
Sbjct: 60  PSYAVVEF--IRSTPIPIQLFFVY---FGLPVV--------GIRPSALVTGIAVLGVHYA 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            +++E+ R+G+ A+P+GQ EA  AL L+  +  R V+LPQ +R I+P   +Q + L K +
Sbjct: 107 CYMSEVYRAGIDAIPQGQWEACTALSLSPYRTWRAVVLPQVVRRILPSTGNQVIALFKET 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              + +G  ++V+V      Q  + IE I I   I+L+ S   ++ M +L  ++A 
Sbjct: 167 PFLIVIGVLEMVTVANQFGGQNYRYIEPITIAGLIFLAASYPTSVLMRKLEIRVAR 222



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 82  DSSYATAILVGFVN-----TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +  YA  +L G V      T  +  +  + A ++G ++  GR S  + ++W     VE  
Sbjct: 9   NWDYAHEVLPGLVAAFFKFTLGITAASSLVAIVLGLVLVLGRRSGARWISWPSYAVVEFI 68

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDH 161
           R+ P  + +FF+Y  +  V   P  
Sbjct: 69  RSTPIPIQLFFVYFGLPVVGIRPSA 93


>gi|57167897|ref|ZP_00367037.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|57021019|gb|EAL57683.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
          Length = 261

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/251 (24%), Positives = 114/251 (45%), Gaps = 18/251 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV+IF L         +  +       +   N+ +     T+  +    + S  LGIV+ 
Sbjct: 27  LVLIFILSLFFYFSFSVSAYHFNFVSLLEYKNKIIYGFFQTLSVSFFALICSIFLGIVIC 86

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
            F+            +    LY+   LI G P LV + L + +  +              
Sbjct: 87  FFS-----LSKIIILRFFATLYVE--LIRGTPLLVQVLLVFYIIANS-----------LG 128

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               ++     LS ++AA+++EI R+G+++VP  Q+E+A ALGL+ R+    ++ PQA++
Sbjct: 129 FDDRYIVGIFILSMFSAAYLSEIFRAGILSVPIIQIESARALGLSERQIFLYIIFPQAIK 188

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +I+ P++ Q  NL+K+SSL   +   +L      + +     +E  ++  F YL L++ I
Sbjct: 189 NILAPISGQLANLIKDSSLLSVIALNELTQSIQEVNSYIFATLEGYIVLAFAYLILTLPI 248

Query: 382 ALFMNRLNAKI 392
            +F   L  K 
Sbjct: 249 GVFSRYLERKY 259



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 44/100 (44%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
             F +      + S   Y   I+ GF  T  ++F  +I +  +G ++    LS   ++ +
Sbjct: 39  FSFSVSAYHFNFVSLLEYKNKIIYGFFQTLSVSFFALICSIFLGIVICFFSLSKIIILRF 98

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
              +YVE+ R  P LV +  ++  + + L   D  IV  F
Sbjct: 99  FATLYVELIRGTPLLVQVLLVFYIIANSLGFDDRYIVGIF 138


>gi|153010785|ref|YP_001371999.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562673|gb|ABS16170.1| Ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Ochrobactrum anthropi ATCC 49188]
          Length = 219

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 14/226 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L            + + S  +G +L+ FA  ++R         + ++YI  F  
Sbjct: 1   MHWTEYLPALFKGAQITVVLALSSMAIGTLLA-FAAGIARFAGGPILSTIAVIYIEIF-- 57

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G   LV +   + L++  P++                +  + L     A+ AE+VR  L
Sbjct: 58  RGTSLLVQL---FWLYYALPLI--------GISFDPITTGIMGLGLNIGAYGAEVVRGAL 106

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP  Q EAA AL  +       ++LPQA+  ++P   +  ++ LK+++LA  +  +DL
Sbjct: 107 QAVPEAQHEAARALNFSRGHTLFHIVLPQAVVEMMPAFGNLAIHNLKDTALASLIAISDL 166

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 + N T   + I  + +  Y ++++++A  +  L  ++  +
Sbjct: 167 TFQAQRLRNLTLDNVTIYSLTLLGYFAMALVLASAIRWLERRLKRQ 212



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 43/103 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  A+  G   T  LA S M   T++    G  R +   +++ I  +Y+E+FR    LV 
Sbjct: 6   YLPALFKGAQITVVLALSSMAIGTLLAFAAGIARFAGGPILSTIAVIYIEIFRGTSLLVQ 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +F+LY ++  +    D       G+ LN        +     A
Sbjct: 66  LFWLYYALPLIGISFDPITTGIMGLGLNIGAYGAEVVRGALQA 108


>gi|78065760|ref|YP_368529.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77966505|gb|ABB07885.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia sp. 383]
          Length = 237

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG V ++    ++R    K        Y  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASISLGFVCAVPL-AVARVSKNKWVSTPVRFY--TYVFRGTPLYVQLLLLYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   + +  +     F    +A +  T A+  EI    + A+P G++EAA A G
Sbjct: 82  MYSLEFVRSHSLLD-AFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R V+LP A+R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MSPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   IYL++S  +     R    
Sbjct: 201 QSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 31/72 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S NK V+   R Y  VFR  P  V +  LY
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSTPVRFYTYVFRGTPLYVQLLLLY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|28900493|ref|NP_800148.1| arginine transporter permease subunit ArtQ [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260365646|ref|ZP_05778167.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus K5030]
 gi|260877446|ref|ZP_05889801.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus AN-5034]
 gi|260898927|ref|ZP_05907368.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus Peru-466]
 gi|260901239|ref|ZP_05909634.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus AQ4037]
 gi|28808873|dbj|BAC61981.1| arginine ABC transporter, permease protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308089212|gb|EFO38907.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus Peru-466]
 gi|308090630|gb|EFO40325.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus AN-5034]
 gi|308106792|gb|EFO44332.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus AQ4037]
 gi|308111440|gb|EFO48980.1| arginine ABC transporter, permease protein ArtQ [Vibrio
           parahaemolyticus K5030]
          Length = 229

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 7/212 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G++L++     S     +     P     T +      LV++ + + 
Sbjct: 15  WMTVQLAFTSLLVGLILAVVFA--SGEMARRAFVKWPTTAFVTVVRGLPEILVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  +ALS   A++ ++ +R  L AV RGQ EAA AL
Sbjct: 73  -----STQVLFLITGDFIEVSPFLSGVVALSLIFASYASQTLRGALKAVGRGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GISQFHAFVRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    IYL ++++    +  ++ K +++
Sbjct: 188 FTWYATAAAIYLVITLITQRAVKVIDKKFSIQ 219


>gi|238788679|ref|ZP_04632471.1| Histidine transport system permease protein hisQ [Yersinia
           frederiksenii ATCC 33641]
 gi|238723274|gb|EEQ14922.1| Histidine transport system permease protein hisQ [Yersinia
           frederiksenii ATCC 33641]
          Length = 228

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S ++G++ +      +R           L    T LI G+P LVL+ L +  
Sbjct: 19  LALCSVLLSVIIGLIGAGGKLSSNRLLSG-------LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AVP GQ+EAA A G
Sbjct: 72  LQITLNTITESLGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPAGQIEAARAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
               +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FNSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGVVYLVFTTVSNGVLLWLERRYSHGVKR 225


>gi|308186030|ref|YP_003930161.1| glutamate/aspartate transport system permease protein gltJ [Pantoea
           vagans C9-1]
 gi|308056540|gb|ADO08712.1| Glutamate/aspartate transport system permease protein gltJ [Pantoea
           vagans C9-1]
          Length = 246

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK-IFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   ++ +F +G    +  T  +R     
Sbjct: 5   WNWGIFLEQAPFGNTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFGILRTVPNRLLSTI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+    F     P LV   L      +     QF           F+S
Sbjct: 65  GTCYVELFRNIPLIVQFFFWYLVAPELVGEKLGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPAGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++++I L M+ +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVAINLVIMLLMSLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 10/108 (9%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
            +    G   E+A F           +++Y   +  GF  T  ++    I A  +G+  G
Sbjct: 2   GIDWNWGIFLEQAPFG----------NTTYLGWLWSGFQVTIAVSCCAWIIAFCVGSFFG 51

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
             R   N+L++ I   YVE+FRNIP +V  FF Y     ++       
Sbjct: 52  ILRTVPNRLLSTIGTCYVELFRNIPLIVQFFFWYLVAPELVGEKLGMW 99


>gi|251791766|ref|YP_003006487.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540387|gb|ACT09008.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 252

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 105/223 (47%), Gaps = 11/223 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                +FP   +   A   V S + G+  ++  T L        G A  LL +       
Sbjct: 12  YLMWGTFPDGPLGGAALTLVLSLMAGLTSAVLGTVLGVALAMLRGWAGGLLALVLGFFRA 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G++A
Sbjct: 72  IPV---IMLIFWTYFLLPMVFGVDI-------PEITTVVCALALIASAYLAHGVKAGIVA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ +A ++LGL   +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  
Sbjct: 122 IGRGQWQAGMSLGLGRWQTLWYIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTF 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   + N++     E+ L    +Y    + + L    L+ +  
Sbjct: 182 LATQVNNRSMVYPTEVFLFIALVYFIFCLSLDLLAQGLSRRFR 224


>gi|299066138|emb|CBJ37321.1| putative amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum CMR15]
          Length = 232

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 98/183 (53%), Gaps = 8/183 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L +  T L++ +    L+ + +  +F  P L           + +F ++  AL
Sbjct: 52  RVSPFRALRWPVTALVYVVRGTPLLMVIFWAYFLLPTLTG-------QRTDQFNTMLTAL 104

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             + AA++AEIVR+G+ A+PRGQME+A +LGL + +A RLV+LPQA+R+++P L +Q ++
Sbjct: 105 VVFDAAYLAEIVRAGIQALPRGQMESARSLGLPYLQAMRLVILPQALRNMLPSLVNQLVS 164

Query: 334 LLKNSSLAVAVGFADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K +SL   +   ++  V G I  +   Q+ E+  +    Y ++   +      L  ++
Sbjct: 165 TIKETSLGYIISLPEVSFVAGQISTSVMTQSAEVYGLLALSYFAMCFGLTRVAYLLERRL 224

Query: 393 ALK 395
           A +
Sbjct: 225 AAR 227


>gi|238753776|ref|ZP_04615137.1| Histidine transport system permease protein hisM [Yersinia ruckeri
           ATCC 29473]
 gi|238708012|gb|EEQ00369.1| Histidine transport system permease protein hisM [Yersinia ruckeri
           ATCC 29473]
          Length = 237

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 94/227 (41%), Gaps = 2/227 (0%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYI 224
              +    + L +      T   I ++  +  +V+                +A+ L ++ 
Sbjct: 1   MDILHQYWQPLLWSDGYRFTGVAITLWLLISSVVMGGLLAIPLAVARVSAHQAIRLPVWF 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T++  G P  V + + Y   +   ++    F+  +          +AL+  T A+  EI
Sbjct: 61  FTYIFRGTPLYVQLLVFYSGMYSLEIVRGSEFL-NAFFRSGLNCTILALTLNTCAYTTEI 119

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
               + AVP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA   
Sbjct: 120 FAGAIRAVPSGEVEAANAYGFSRFKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTA 179

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              D++ +   I   T Q      I   +YL +S ++     +   +
Sbjct: 180 TVPDILKIARDINAATYQPFYAFGIAAVLYLIISFVLISLFRQAERR 226


>gi|148560414|ref|YP_001259774.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148371671|gb|ABQ61650.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
          Length = 232

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 98/219 (44%), Gaps = 14/219 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +     +           I + +   G ++S+    L    H +  + +   Y+
Sbjct: 1   MNFDFSVIFDNWTLFARGTWLTIVIAIVAIATGFLISI-PIALMALSHRRPLRWISSAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       +VL    Y L F                 PE +   IAL+ + +++ AEI
Sbjct: 60  EWFRNI-PFIVVLYLFFYGLPF------------MGVRLPESIVGTIALAFFASSYFAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++AVP+GQMEAA A+G+++ +    ++ PQ +R ++PP T+  ++++K +S+   +
Sbjct: 107 IRGAILAVPKGQMEAARAIGMSYFQGLYEIVAPQTVRLLLPPSTNTSISMVKETSVLSTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
             A+L   G  I  +T    EI L    IY  ++ + A 
Sbjct: 167 TVAELTYQGLVIQGETFAPFEIFLTTAAIYWMITAIFAY 205



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T    G   T  +A   +    +I   +    LS  + + WI   YVE FRNIP +VV+
Sbjct: 12  WTLFARGTWLTIVIAIVAIATGFLISIPIALMALSHRRPLRWISSAYVEWFRNIPFIVVL 71

Query: 146 FFLYKSVL 153
           +  +  + 
Sbjct: 72  YLFFYGLP 79


>gi|15800367|ref|NP_286379.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 EDL933]
 gi|15829946|ref|NP_308719.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. Sakai]
 gi|16128636|ref|NP_415186.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|26246627|ref|NP_752667.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli CFT073]
 gi|74311189|ref|YP_309608.1| glutamate/aspartate transport system permease [Shigella sonnei
           Ss046]
 gi|82775930|ref|YP_402277.1| glutamate/aspartate transport system permease [Shigella dysenteriae
           Sd197]
 gi|89107522|ref|AP_001302.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|91209694|ref|YP_539680.1| glutamate/aspartate transport system permease [Escherichia coli
           UTI89]
 gi|110640875|ref|YP_668603.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli 536]
 gi|117622862|ref|YP_851775.1| glutamate/aspartate transport system permease [Escherichia coli
           APEC O1]
 gi|168752223|ref|ZP_02777245.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758296|ref|ZP_02783303.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764670|ref|ZP_02789677.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767100|ref|ZP_02792107.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4486]
 gi|168777606|ref|ZP_02802613.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779144|ref|ZP_02804151.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4076]
 gi|168786503|ref|ZP_02811510.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC869]
 gi|168802437|ref|ZP_02827444.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC508]
 gi|170080232|ref|YP_001729552.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170080333|ref|YP_001729653.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|191168676|ref|ZP_03030456.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli B7A]
 gi|191173970|ref|ZP_03035488.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli F11]
 gi|193063459|ref|ZP_03044549.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E22]
 gi|193069122|ref|ZP_03050080.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E110019]
 gi|194429740|ref|ZP_03062256.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli B171]
 gi|194439897|ref|ZP_03071960.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli 101-1]
 gi|195939391|ref|ZP_03084773.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli O157:H7 str. EC4024]
 gi|208809671|ref|ZP_03252008.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4206]
 gi|208815262|ref|ZP_03256441.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4045]
 gi|208823066|ref|ZP_03263384.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397952|ref|YP_002269288.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4115]
 gi|209917914|ref|YP_002291998.1| glutamate/aspartate ABC transporter permease [Escherichia coli
           SE11]
 gi|215485686|ref|YP_002328117.1| glutamate/aspartate transport system permease GltK; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|217325840|ref|ZP_03441924.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. TW14588]
 gi|218553195|ref|YP_002386108.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli IAI1]
 gi|218557584|ref|YP_002390497.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli S88]
 gi|218688469|ref|YP_002396681.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli ED1a]
 gi|218694093|ref|YP_002401760.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli 55989]
 gi|218699018|ref|YP_002406647.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli IAI39]
 gi|227884374|ref|ZP_04002179.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein GltK [Escherichia coli
           83972]
 gi|237707380|ref|ZP_04537861.1| glutamate/aspartate transport system permease gltK [Escherichia sp.
           3_2_53FAA]
 gi|238899930|ref|YP_002925726.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|253774363|ref|YP_003037194.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160732|ref|YP_003043840.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|254791817|ref|YP_003076654.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli O157:H7 str. TW14359]
 gi|256020605|ref|ZP_05434470.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Shigella sp. D9]
 gi|256023735|ref|ZP_05437600.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Escherichia sp. 4_1_40B]
 gi|260842879|ref|YP_003220657.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O103:H2 str. 12009]
 gi|260853904|ref|YP_003227795.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O26:H11 str. 11368]
 gi|260866801|ref|YP_003233203.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O111:H- str. 11128]
 gi|261224122|ref|ZP_05938403.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257816|ref|ZP_05950349.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H7 str. FRIK966]
 gi|291281603|ref|YP_003498421.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli O55:H7 str. CB9615]
 gi|293413949|ref|ZP_06656598.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli B185]
 gi|293418765|ref|ZP_06661200.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli B088]
 gi|297519698|ref|ZP_06938084.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli OP50]
 gi|300817827|ref|ZP_07098041.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300823030|ref|ZP_07103164.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300907831|ref|ZP_07125447.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300927242|ref|ZP_07142973.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300931588|ref|ZP_07146900.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300937880|ref|ZP_07152672.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300951153|ref|ZP_07165017.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300959227|ref|ZP_07171303.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300989988|ref|ZP_07179064.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300996684|ref|ZP_07181509.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|301025220|ref|ZP_07188789.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|301028864|ref|ZP_07192039.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301049843|ref|ZP_07196782.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|301302135|ref|ZP_07208268.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301329182|ref|ZP_07222175.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301643931|ref|ZP_07243958.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306812922|ref|ZP_07447115.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli NC101]
 gi|307137270|ref|ZP_07496626.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli H736]
 gi|307312631|ref|ZP_07592263.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309786313|ref|ZP_07680939.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           dysenteriae 1617]
 gi|309795479|ref|ZP_07689896.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|331641157|ref|ZP_08342292.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H736]
 gi|331645810|ref|ZP_08346913.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli M605]
 gi|331651666|ref|ZP_08352685.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli M718]
 gi|331656673|ref|ZP_08357635.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA206]
 gi|331667007|ref|ZP_08367881.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA271]
 gi|331672185|ref|ZP_08372977.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA280]
 gi|331676313|ref|ZP_08377025.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H591]
 gi|331682070|ref|ZP_08382694.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H299]
 gi|84028711|sp|P0AER7|GLTK_ECO57 RecName: Full=Glutamate/aspartate transport system permease protein
           gltK
 gi|84028712|sp|P0AER6|GLTK_ECOL6 RecName: Full=Glutamate/aspartate transport system permease protein
           gltK
 gi|84028713|sp|P0AER5|GLTK_ECOLI RecName: Full=Glutamate/aspartate transport system permease protein
           gltK
 gi|12513560|gb|AAG54987.1|AE005244_5 glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. EDL933]
 gi|26107026|gb|AAN79210.1|AE016757_114 Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli CFT073]
 gi|624631|gb|AAA60981.1| GltK [Escherichia coli]
 gi|1651272|dbj|BAA35305.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K12 substr. W3110]
 gi|1778571|gb|AAB40854.1| glutamate/aspartate transport system permease protein [Escherichia
           coli]
 gi|1786873|gb|AAC73754.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|13360150|dbj|BAB34115.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. Sakai]
 gi|73854666|gb|AAZ87373.1| glutamate/aspartate transport system permease [Shigella sonnei
           Ss046]
 gi|81240078|gb|ABB60788.1| glutamate/aspartate transport system permease [Shigella dysenteriae
           Sd197]
 gi|91071268|gb|ABE06149.1| glutamate/aspartate transport system permease [Escherichia coli
           UTI89]
 gi|110342467|gb|ABG68704.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli 536]
 gi|115511986|gb|ABJ00061.1| glutamate/aspartate transport system permease [Escherichia coli
           APEC O1]
 gi|169888067|gb|ACB01774.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|169888168|gb|ACB01875.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|187767199|gb|EDU31043.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013883|gb|EDU52005.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002805|gb|EDU71791.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354839|gb|EDU73258.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363542|gb|EDU81961.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365363|gb|EDU83779.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373588|gb|EDU92004.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC869]
 gi|189375558|gb|EDU93974.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC508]
 gi|190901268|gb|EDV61037.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli B7A]
 gi|190905746|gb|EDV65367.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli F11]
 gi|192931043|gb|EDV83647.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E22]
 gi|192957666|gb|EDV88111.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E110019]
 gi|194412221|gb|EDX28527.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli B171]
 gi|194421191|gb|EDX37215.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli 101-1]
 gi|208729472|gb|EDZ79073.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4206]
 gi|208731910|gb|EDZ80598.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4045]
 gi|208737259|gb|EDZ84943.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4042]
 gi|209159352|gb|ACI36785.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. EC4115]
 gi|209776928|gb|ACI86776.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776930|gb|ACI86777.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776932|gb|ACI86778.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776934|gb|ACI86779.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776936|gb|ACI86780.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209911173|dbj|BAG76247.1| glutamate/aspartate ABC transporter permease component [Escherichia
           coli SE11]
 gi|215263758|emb|CAS08094.1| glutamate/aspartate transport system permease GltK; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|217322061|gb|EEC30485.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli O157:H7 str. TW14588]
 gi|218350825|emb|CAU96519.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli 55989]
 gi|218359963|emb|CAQ97507.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli IAI1]
 gi|218364353|emb|CAR02028.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli S88]
 gi|218369004|emb|CAR16758.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli IAI39]
 gi|218426033|emb|CAR06850.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli ED1a]
 gi|222032406|emb|CAP75145.1| glutamate/aspartate transport system permease protein [Escherichia
           coli LF82]
 gi|226898590|gb|EEH84849.1| glutamate/aspartate transport system permease gltK [Escherichia sp.
           3_2_53FAA]
 gi|227838460|gb|EEJ48926.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein GltK [Escherichia coli
           83972]
 gi|238861326|gb|ACR63324.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|242376426|emb|CAQ31128.1| gltK, subunit of GltIJKL glutamate ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253325407|gb|ACT30009.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972633|gb|ACT38304.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|253976827|gb|ACT42497.1| glutamate and aspartate transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|254591217|gb|ACT70578.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|257752553|dbj|BAI24055.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O26:H11 str. 11368]
 gi|257758026|dbj|BAI29523.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O103:H2 str. 12009]
 gi|257763157|dbj|BAI34652.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O111:H- str. 11128]
 gi|260450180|gb|ACX40602.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177801|dbj|BAI54131.1| glutamate/aspartate ABC transporter permease component [Escherichia
           coli SE15]
 gi|284920453|emb|CBG33514.1| glutamate/aspartate ABC transporter, permease protein [Escherichia
           coli 042]
 gi|290761476|gb|ADD55437.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli O55:H7 str. CB9615]
 gi|291325293|gb|EFE64708.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli B088]
 gi|291434007|gb|EFF06980.1| glutamate/aspartate transport system permease gltK [Escherichia
           coli B185]
 gi|294491939|gb|ADE90695.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli IHE3034]
 gi|299878152|gb|EFI86363.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300298395|gb|EFJ54780.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300304462|gb|EFJ58982.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300314172|gb|EFJ63956.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300396149|gb|EFJ79687.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300400463|gb|EFJ84001.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300407263|gb|EFJ90801.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300416792|gb|EFK00103.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300449582|gb|EFK13202.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300457105|gb|EFK20598.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300460612|gb|EFK24105.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300524379|gb|EFK45448.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529524|gb|EFK50586.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300842687|gb|EFK70447.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|300844487|gb|EFK72247.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|301077701|gb|EFK92507.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|305853685|gb|EFM54124.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli NC101]
 gi|306907333|gb|EFN37838.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307552516|gb|ADN45291.1| glutamate/aspartate transport system permease protein [Escherichia
           coli ABU 83972]
 gi|307627916|gb|ADN72220.1| Glutamate/aspartate transport system permease protein gltK
           [Escherichia coli UM146]
 gi|308120854|gb|EFO58116.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|308925707|gb|EFP71188.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           dysenteriae 1617]
 gi|309700892|emb|CBJ00189.1| glutamate/aspartate ABC transporter, permease protein [Escherichia
           coli ETEC H10407]
 gi|312945193|gb|ADR26020.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O83:H1 str. NRG 857C]
 gi|315059908|gb|ADT74235.1| glutamate and aspartate transporter subunit [Escherichia coli W]
 gi|315135319|dbj|BAJ42478.1| glutamate/aspartate transport system permease protein gltK
           [Escherichia coli DH1]
 gi|315255041|gb|EFU35009.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315287082|gb|EFU46496.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315299180|gb|EFU58434.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|315616425|gb|EFU97042.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 3431]
 gi|320193059|gb|EFW67699.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. EC1212]
 gi|320194172|gb|EFW68804.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli WV_060327]
 gi|320198222|gb|EFW72826.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli EC4100B]
 gi|320638104|gb|EFX07868.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H7 str. G5101]
 gi|320643508|gb|EFX12678.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H- str. 493-89]
 gi|320648843|gb|EFX17470.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H- str. H 2687]
 gi|320654427|gb|EFX22474.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320660109|gb|EFX27639.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O55:H7 str. USDA 5905]
 gi|320664907|gb|EFX32042.1| glutamate/aspartate transport system permease GltK [Escherichia
           coli O157:H7 str. LSU-61]
 gi|323153622|gb|EFZ39870.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli EPECa14]
 gi|323158893|gb|EFZ44904.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli E128010]
 gi|323163914|gb|EFZ49723.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           sonnei 53G]
 gi|323170777|gb|EFZ56427.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli LT-68]
 gi|323179870|gb|EFZ65427.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1180]
 gi|323184992|gb|EFZ70359.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1357]
 gi|323191285|gb|EFZ76549.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli RN587/1]
 gi|323379528|gb|ADX51796.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323938415|gb|EGB34669.1| inner membrane transport system [Escherichia coli E1520]
 gi|323943068|gb|EGB39227.1| inner membrane transport system [Escherichia coli E482]
 gi|323945128|gb|EGB41190.1| inner membrane transport system [Escherichia coli H120]
 gi|323952776|gb|EGB48644.1| inner membrane transport system [Escherichia coli H252]
 gi|323958405|gb|EGB54111.1| inner membrane transport system [Escherichia coli H263]
 gi|323963221|gb|EGB58789.1| inner membrane transport system [Escherichia coli H489]
 gi|323972108|gb|EGB67322.1| inner membrane transport system [Escherichia coli TA007]
 gi|324006308|gb|EGB75527.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324010470|gb|EGB79689.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|324016084|gb|EGB85303.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324116727|gb|EGC10642.1| inner membrane transport system [Escherichia coli E1167]
 gi|326341403|gb|EGD65195.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. 1044]
 gi|326345817|gb|EGD69556.1| Glutamate Aspartate transport system permease protein GltK
           [Escherichia coli O157:H7 str. 1125]
 gi|331037955|gb|EGI10175.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H736]
 gi|331044562|gb|EGI16689.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli M605]
 gi|331049944|gb|EGI22002.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli M718]
 gi|331054921|gb|EGI26930.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA206]
 gi|331066231|gb|EGI38115.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA271]
 gi|331070652|gb|EGI42015.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA280]
 gi|331076371|gb|EGI47653.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H591]
 gi|331080749|gb|EGI51923.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli H299]
 gi|332104146|gb|EGJ07492.1| glutamate and aspartate transporter subunit [Shigella sp. D9]
          Length = 224

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|290512796|ref|ZP_06552161.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55]
 gi|289774679|gb|EFD82682.1| glutamine ABC transporter permease [Klebsiella sp. 1_1_55]
          Length = 219

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   LI G P +V +   Y   F  P++                +  I +   + A+IAE
Sbjct: 58  VFVELIRGTPIMVQVMFIY---FALPMV-------LPVRIDPVPAAIITIVINSGAYIAE 107

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  ++++ +G  EA++A+GL+ R     V++P A R +IP L +Q++  +K++SL + 
Sbjct: 108 ITRGAILSINKGFKEASLAMGLSPRSTLLHVIMPLAFRRMIPALGNQWIISIKDTSLFIV 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G A+L   G  II    +A+E+      IYL L++ ++  + +L  +I +
Sbjct: 168 IGVAELTRQGQEIIAGNFRALEVWTAVAMIYLFLTLCLSFLLKQLEKRIHI 218


>gi|255264635|ref|ZP_05343977.1| octopine transport system permease protein OccM [Thalassiobium sp.
           R2A62]
 gi|255106970|gb|EET49644.1| octopine transport system permease protein OccM [Thalassiobium sp.
           R2A62]
          Length = 245

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 6/212 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V S +LG +L++    L R            + +  F   G P LV + + Y  
Sbjct: 38  VTIELLVLSSILGFLLAVSL-VLGRMSGNAVLSWPSNVLVYCF--RGTPLLVQLWIVY-F 93

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +     +P +    + L   T+A+++EI+R GL+ V +GQMEAA ++G
Sbjct: 94  GIGSFGADGLGPLWVFFKNP-WAVGLLVLVLNTSAYVSEILRGGLVNVDKGQMEAAQSIG 152

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++   A R ++LPQA+R   P   ++ + L+K S+L   +   DL+    T+  +    +
Sbjct: 153 MSWLTAMRRIMLPQAIRIAWPAYGNELVLLMKGSALISTITVLDLMGQTRTVFARNFD-L 211

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              L     YL L+ +I +F++ +    +   
Sbjct: 212 NTYLYAAVFYLILAGIITVFVSAVQRNFSKSR 243



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  L     I   ++   +  GR+S N +++W   V V  FR  P LV ++ +
Sbjct: 32  FIDGLAVTIELLVLSSILGFLLAVSLVLGRMSGNAVLSWPSNVLVYCFRGTPLLVQLWIV 91

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           Y  + S        + + F        L     T    ++I     V
Sbjct: 92  YFGIGSFGADGLGPLWVFFKNPWAVGLLVLVLNTSAYVSEILRGGLV 138


>gi|328470444|gb|EGF41355.1| arginine transporter permease subunit ArtM [Vibrio parahaemolyticus
           10329]
          Length = 222

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++   S  +G +L+L  T L+          +    I+ F   
Sbjct: 1   MNEQHVWQMLDGLVTSLQLTAASLAVGCILALLMT-LTLILRTPGLHWVSRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +   +  + +S  +    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDAVRE--SVLWTWLSQPWFCAMLALALNTAAYSTQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPSGQWQACRALGMNKSATL-RVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  +    YLS++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLMVFGVAGAFYLSVNGILTLIFRQVEKK 215


>gi|157146482|ref|YP_001453801.1| arginine transporter permease subunit ArtM [Citrobacter koseri ATCC
           BAA-895]
 gi|157083687|gb|ABV13365.1| hypothetical protein CKO_02242 [Citrobacter koseri ATCC BAA-895]
          Length = 222

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASIIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L  +  +      P ++   +ALS  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPGQFPSLQDYPVLWHLLSEP-WLCALLALSLNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            G  +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 HGQLLYGRTYDVM-VFGAAGVIYLIVNGLLTLLMRLIERKALAFERR 221



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 40/114 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASIIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + D+ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPSLQDYPVLWHLLSEPWLCALLALSLNSAAYTTQLFYGAIRAI 117


>gi|304395133|ref|ZP_07377017.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357386|gb|EFM21749.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 308

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 15/270 (5%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    +V +F L   V SV   P     +    F +   L     T+       VFS + 
Sbjct: 17  RTAGAIVALFILAGVVQSVAFNPRWEWSVFARWFFDPVILHGLGQTLLLTLLGTVFSLL- 75

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
                     L+      +     L +   +L   LP +V++ + Y   +    L     
Sbjct: 76  ------LGGLLALARLSSSWLLSTLAWGYIWLFRSLPLIVVLIILYNFSYLYDTLSIGIP 129

Query: 257 IGGSTVSP--------EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
             G +           +F +  I L+   AA+ AEI+R G++ V  GQ+EAA ALGL+  
Sbjct: 130 FTGLSWGAYQTINVLGQFQAAVIGLTLVQAAYSAEIIRGGILGVDHGQVEAASALGLSAT 189

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           + T  ++LPQA+R+IIP   ++ ++L K +S+   +   +L      I N+  + I +++
Sbjct: 190 RRTFRIILPQALRAIIPVAFNEIISLAKGTSVVYVLAMPELFYTIQMIYNRNQEVIPLLM 249

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    YL ++ ++++        +A    +
Sbjct: 250 VGAAWYLIITTVLSVIQYNAERWMARSVTR 279


>gi|302335554|ref|YP_003800761.1| amino acid ABC transporter membrane protein, PAAT family [Olsenella
           uli DSM 7084]
 gi|301319394|gb|ADK67881.1| amino acid ABC transporter membrane protein, PAAT family [Olsenella
           uli DSM 7084]
          Length = 217

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 102/216 (47%), Gaps = 11/216 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                      + +IF+ + +  + L +    L R    +    L  LYIS  L+ G P 
Sbjct: 6   MFGMLVQGYVVSLQIFLLTLLGAVPLGVIV-ALGRLSKFRPLSFLTGLYIS--LMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ +   + + +       + F   +  S  F+++ IA     AA+ AEI RSG+ ++P+
Sbjct: 63  MLQMFAVFFIPY-------YVFGQQTGPSYMFVAVMIAFIVNYAAYFAEIYRSGIQSMPQ 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG +  +    ++LPQ  + I+P + ++ + L+K++SLA ++G A++ +   
Sbjct: 116 GQYEAAQVLGYSRSQTFFGIILPQVFKRILPAMGNEVVTLVKDTSLAFSIGIAEMFTTSR 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++  + + +    +   IY    ++I   + R   
Sbjct: 176 ALVA-SQRNMAPFALAALIYWVTCLLIEFALRRAEK 210



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 43/107 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+    ++ G+V +  +    ++ A  +G +V  GRLS  + ++++  +Y+ + R  P +
Sbjct: 4   STMFGMLVQGYVVSLQIFLLTLLGAVPLGVIVALGRLSKFRPLSFLTGLYISLMRGTPLM 63

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++     V         +   + +               + I
Sbjct: 64  LQMFAVFFIPYYVFGQQTGPSYMFVAVMIAFIVNYAAYFAEIYRSGI 110


>gi|240102153|ref|YP_002958461.1| ABC-type amino acid transport system, permease component
           [Thermococcus gammatolerans EJ3]
 gi|239909706|gb|ACS32597.1| ABC-type amino acid transport system, permease component
           [Thermococcus gammatolerans EJ3]
          Length = 189

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 100/188 (53%), Gaps = 7/188 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R +  +  +AL   YI   LI G P L+ +   Y + F  P++ + +F   + V    
Sbjct: 1   MARTYGGRLSRALSATYIE--LIRGTPMLLQL---YIIGFGLPLVIRDHFP--NFVMDPT 53

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++  + +   +AA+ AE +R    ++  GQ+EAA++LG+T  +  R V+ PQA R ++P 
Sbjct: 54  VAAALGMVINSAAYQAEYIRGAFNSIEYGQVEAALSLGMTKWEIIRHVIFPQAFRIMLPS 113

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            T++ + LLK SSLA+ +   +L+       +QT    +I L+   IYL  + +I   M 
Sbjct: 114 WTNEMVYLLKYSSLAMLLAVPELMYEASVAASQTFLYAQIYLVVAGIYLVFATLIIGIMR 173

Query: 387 RLNAKIAL 394
           ++  K+ +
Sbjct: 174 KVELKLHI 181


>gi|52424277|ref|YP_087414.1| arginine transporter permease subunit ArtM [Mannheimia
           succiniciproducens MBEL55E]
 gi|52306329|gb|AAU36829.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 227

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 14/231 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +           + T+  +   +  +  VL+LF T L    ++   +   ++ I   L  
Sbjct: 1   MFREYFMEIARGIPTSLLLTAVALAVAFVLALFLTFLLSMENKPVKR---VINIFLTLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVR 286
           G P LV   L Y         GQF +I  S + P     +     AL+  +AA+  ++  
Sbjct: 58  GTPLLVQFFLIYSGP------GQFQWIVNSALWPLLSNAWFCAMFALALNSAAYSTQLFH 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K +SLA  +  
Sbjct: 112 GAVKAIPKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTSLASTITI 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D++     +      AI I  I   IYL ++ ++ L + +L  K+   E+
Sbjct: 171 MDIMGYARQLYGTEYDAITIYGIAGVIYLVITGLMTLLLRKLEHKVLAFER 221


>gi|260102749|ref|ZP_05752986.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|260083442|gb|EEW67562.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus helveticus DSM 20075]
 gi|328462015|gb|EGF34199.1| glutamine ABC transporter membrane protein [Lactobacillus
           helveticus MTCC 5463]
          Length = 217

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFV+G++L L      ++     G    
Sbjct: 2   ETFIHAYSWVDIRFLLQGLWVTIYVSLISIALSFVVGLILGLIRYTKIKYVSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+    +   AL  +  A 
Sbjct: 58  ------FIIDIIRNLPLLLIIFFTYFGLPQL--------GIVTNPTTASIAALVIFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ +V  GQME A + G+++ +A   V++PQA+  +IP L +Q+++L+K++SL
Sbjct: 104 LAEIVRSGIGSVDPGQMEGARSNGMSYGQAMYHVVMPQALNHMIPALLAQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   ++   N L  K 
Sbjct: 164 ATIIVLPELLYNAQIIYSQNTTYLIPMYVIIAIMYFVVCFCLSTIANYLQKKY 216



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 37/71 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R +  K V+ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLIRYTKIKYVSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|229588543|ref|YP_002870662.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229360409|emb|CAY47266.1| putative amino acid ABC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 365

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 117/267 (43%), Gaps = 16/267 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            + PL V  F  K++  +  +  + I+  F +     GL+    +      + +    +G
Sbjct: 109 GVAPLFVSRFQRKAIYGLSFLVLYPIIAFFLLHGGIFGLANVATSQWGGLMLTLVIATVG 168

Query: 198 IVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           I  +L       L R  +    + + + +I  +    L T VL      L    P     
Sbjct: 169 IAGALPLGIMLALGRRSNMPAIRVVCVTFIEFWRGVPLIT-VLFMSSVMLPLFLPEGMGI 227

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +         + +   I +  + +A++AE+VR GL A+P+GQ EAA A+GL + ++  LV
Sbjct: 228 D---------KLLRALIGVILFQSAYVAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLV 278

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWM 371
           +LPQA++ +IP + + ++ L K++SL + +G  DL++            G A E  +   
Sbjct: 279 ILPQALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAA 338

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++      ++ +   L  K+    K+
Sbjct: 339 LVFWIFCFGMSRYSIHLEHKLDTGHKR 365



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 32/67 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A  G+  A  +G ++  GR S    +  +C  ++E +R +P + V+F     
Sbjct: 157 GLMLTLVIATVGIAGALPLGIMLALGRRSNMPAIRVVCVTFIEFWRGVPLITVLFMSSVM 216

Query: 152 VLSVLPI 158
           +   LP 
Sbjct: 217 LPLFLPE 223


>gi|227113605|ref|ZP_03827261.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 218

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              F +   +    L       + + +F+ G +++     L R    K       LY   
Sbjct: 1   MMTFTDWDIVRNLLLAARWTLLLSLTAFIGGAIVTFPLMLL-RLTKRKWPTRFVHLYSEL 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P L+ + L +           F           + +  +AL+ +T+AF+ +I  
Sbjct: 60  F--QGTPLLMQLFLAF-----------FGLALFGIDVSPWTAAALALTLFTSAFLVDIWC 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ EA+  LGL   +    V+ PQAMR  I P     + ++K ++LA  +GF
Sbjct: 107 GSVEALPKGQWEASRCLGLDFGQTLYRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGF 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 167 IELTKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSYYSRYLEKKF 212


>gi|152969451|ref|YP_001334560.1| arginine transporter permease subunit ArtM [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|262041042|ref|ZP_06014261.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|150954300|gb|ABR76330.1| arginine 3rd transport system permease protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|259041600|gb|EEW42652.1| arginine ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 222

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 104/224 (46%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S ++ ++LSL  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIIVALILSLIFTII---LTLKTPGLVWIVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++ ++      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSLQEYPWLWHLISEP-WLCALIALSLNSAAYTTQLFYGAIRAIPD 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCSALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGIIYLIVNGLLTLLMRLVERKALAFERR 221



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +I A I+  +           + WI R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIIVALILSLIFTIILTLKTPGLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           IF +Y        + ++  + 
Sbjct: 64  IFLIYYGPGQFPSLQEYPWLW 84


>gi|37524240|ref|NP_927584.1| hypothetical protein plu0220 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783663|emb|CAE12515.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 245

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 18/225 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                  +T+  +A   + S +LG VL+      +R    K  + L   Y + F     P
Sbjct: 18  WLWQGFLITLWISACTVIASTLLGFVLA-----AARDSQLKILRWLVTAYTTLF--RNTP 70

Query: 234 TLVLIALKYQ---------LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIA 282
            LV +   Y          + F      + N +G S   P  EF++ +I L+ Y+A F+A
Sbjct: 71  LLVQLFFWYFASGQILPQEVMFWLNTPHEINLLGLSLAWPSFEFLAGFIGLTLYSAPFVA 130

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+G+  + RGQ  AA ALGLT  +A R V+LPQA++   PPL  QY+N++KNSSL +
Sbjct: 131 EELRAGIQGIGRGQKYAAHALGLTGWQAMRYVVLPQALKIATPPLLGQYMNIVKNSSLTM 190

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           A+G A+L      +  +T +  E   +   +Y++   ++  +   
Sbjct: 191 AIGVAELSYASRQVETETLKTFEAFGVATVLYIATIAVMEGWGQW 235



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 42/80 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  GF+ T W++   +I +T++G ++ A R S  K++ W+   Y  +FRN P LV
Sbjct: 14  QYLGWLWQGFLITLWISACTVIASTLLGFVLAAARDSQLKILRWLVTAYTTLFRNTPLLV 73

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
            +FF Y +   +LP      
Sbjct: 74  QLFFWYFASGQILPQEVMFW 93


>gi|270293028|ref|ZP_06199239.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279007|gb|EFA24853.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 266

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PL       + G P LV + L Y       K +  Q+         P  +   +A +   
Sbjct: 75  PLQAFFVSFLKGTPILVQLMLTYYGIPLALKAINQQWGTGFNINAIPAALFAIVAFAFNE 134

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SLA + G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 195 TSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|241206675|ref|YP_002977771.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860565|gb|ACS58232.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 215

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 14/224 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L            + + +F  G ++ L     +R    +  ++    YI+ F  
Sbjct: 4   FTFWDILRNLVFATRWTLMLSLAAFAGGAIVGLAILS-ARISKTRWPRSFASGYIALF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L              + +    L+ Y +A++AEI RSG+
Sbjct: 61  QGTPLLMQLFLMF---FGLPML--------GFRIESWTAAVCGLTFYASAYLAEIWRSGV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ +AA +LGL      RL++LPQA R    P     + L+K+++LA  +GF +L
Sbjct: 110 EAVPRGQWDAAASLGLHRLLELRLIILPQAFRITRAPTVGFLVQLIKSTALASILGFDEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     I N T +  ++  +   I+ +L   +  +   L  K A
Sbjct: 170 LKTANAINNATFEPFKVYGLVAVIFFALCYPLTQYARFLEKKAA 213



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 33/105 (31%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 ++     T  L+ +      I+G  + + R+S  +        Y+ +F+  P L
Sbjct: 7   WDILRNLVFATRWTLMLSLAAFAGGAIVGLAILSARISKTRWPRSFASGYIALFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F ++  +  +    +       G+                 A
Sbjct: 67  MQLFLMFFGLPMLGFRIESWTAAVCGLTFYASAYLAEIWRSGVEA 111


>gi|238794644|ref|ZP_04638250.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia intermedia ATCC 29909]
 gi|238726033|gb|EEQ17581.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia intermedia ATCC 29909]
          Length = 369

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 18/265 (6%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            +R +P       ++     +L              +  R     TLT+   A     + 
Sbjct: 117 FWRAMPRRGRYLAVWMVAYPLLVWLMLYGGFLGLTRVETRQWGGLTLTLIIAAVGIAGAL 176

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            LGI+L+L     +R       + L +++I  +    L T++ ++           +   
Sbjct: 177 PLGILLAL-----ARRSSMPVVRILSVVFIEFWRGVPLITVLFMS----------SVMLP 221

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            F+   T   + +   + +  + +A++AE+VR GL A+PRGQ EAA +LGL + K   LV
Sbjct: 222 LFMTEGTSIDKLIRALVGVVLFQSAYVAEVVRGGLQALPRGQTEAAESLGLGYWKTQGLV 281

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWM 371
           +LPQA++ +IP L +  + L K++SL + +G  DL S            G + E  +   
Sbjct: 282 ILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAA 341

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            +Y      ++ +   L  +     
Sbjct: 342 AVYWIFCFSMSRYSQHLEKRFHTGR 366


>gi|270488378|ref|ZP_06205452.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|270336882|gb|EFA47659.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
          Length = 251

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 107/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   V S + G+  ++  T L        G    +L     L 
Sbjct: 10  WRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGLF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 MAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 224


>gi|119946445|ref|YP_944125.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865049|gb|ABM04526.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 359

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 71/332 (21%), Positives = 130/332 (39%), Gaps = 24/332 (7%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT--IIGTLVGAGRLSANK--- 123
           G  I   ++P   D     A   G       + +  I         + G   ++ +    
Sbjct: 40  GIYIVYIMIPPLLDWMIFDATWSGTQKEIVNSGARWIFIIEKFDQFMYGFYPVAEHWRPN 99

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           LV  I   ++   + IP + V   L      V  +            +         LT+
Sbjct: 100 LVGLISIAFLLSLKFIPNIKVKLGLMLIYPFVCFVLISGG-WFGLEEVPTEKWGGLMLTI 158

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   + SF +GIVL+L      R       K L + +I            LI + + 
Sbjct: 159 LVAAVGIIASFPIGIVLAL-----GRQSEMPILKTLCVGFIEFIRGVP-----LITILFM 208

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P+     F        + +   I ++ + +A+IAE++R GL A+P+GQ EAA +L
Sbjct: 209 ASVVLPL-----FFSDGIDFDKLLRALIGITLFQSAYIAEVIRGGLQAIPKGQYEAAESL 263

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL + +   L++LPQA++  IP L   +++L K+++L + +G  D++++     +     
Sbjct: 264 GLGYWQGMLLIILPQALKISIPNLVGSFISLFKDTTLVLIIGLFDVLAMVTLTTSDALWL 323

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  IE  +    IY      ++ +   +  K 
Sbjct: 324 GYEIEGYVFVTMIYWVCCFSMSQYSKSVERKY 355


>gi|94990274|ref|YP_598374.1| cystine transport system permease protein [Streptococcus pyogenes
           MGAS10270]
 gi|94543782|gb|ABF33830.1| Cystine transport system permease protein [Streptococcus pyogenes
           MGAS10270]
          Length = 216

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+
Sbjct: 52  YLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYIS 103

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS + A+ +GQ EAA ALGL +    R ++LPQA R  +PPL +  ++++K+SSLA 
Sbjct: 104 EVFRSSIEAIDKGQWEAAKALGLPYALMVRKIILPQAFRIAVPPLGNVIIDMVKSSSLAA 163

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 164 MITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|293608328|ref|ZP_06690631.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828901|gb|EFF87263.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325121938|gb|ADY81461.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 225

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 11/234 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  N   ++           + V + + GI++      + R             Y+
Sbjct: 1   MDFSLLQNPDVIAALKEGFIFTLTVTVLAMMGGILIGTPL-AMMRLSSNAIASNFAKFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       + LI + +  +F  P + +F      T      S  +  + + AAF +EI
Sbjct: 60  DLFR-----GIPLIQVIFIFYFLLPKVFEF---QSDTYWGPLFSSVVTFAIFEAAFFSEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ ++ +GQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +
Sbjct: 112 VRSGIQSISKGQVHAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVI 171

Query: 345 GFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D +    T+ N  G        LI   +Y   S +++  + RL  KIA+  
Sbjct: 172 SAPDFLGRADTLANTYGPETKATFYLIVAVVYFCSSFVLSHLVKRLQQKIAIIR 225



 Score = 43.0 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 6/158 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS+N + +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSSNAIASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LYKSVLSVLPIPDHSIV-LPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLF 203
            Y  +  V      +     F   +          +    + I   S      G  L   
Sbjct: 74  FYFLLPKVFEFQSDTYWGPLFSSVVTFAIFEAAFFSEIVRSGIQSISKGQVHAGYALGFT 133

Query: 204 ATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             +  R+    +     LP+L   T ++F   +LV + 
Sbjct: 134 YGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVI 171


>gi|291616415|ref|YP_003519157.1| YhdY [Pantoea ananatis LMG 20103]
 gi|291151445|gb|ADD76029.1| YhdY [Pantoea ananatis LMG 20103]
 gi|327392855|dbj|BAK10277.1| amino acid ABC transporter permease protein YhdY [Pantoea ananatis
           AJ13355]
          Length = 225

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 87/225 (38%), Gaps = 11/225 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           GM             +         S V  +  +L    L      K      ++   T 
Sbjct: 6   GMMTTFTDWDILRNLLLAARWTIALSLVAFLGGTLVTLPLLFLRLLKRKWLTRVIRAYTE 65

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L  G P L+ + L +           F           + +  +AL+ YT+AF+ +I   
Sbjct: 66  LFQGTPLLMQLFLAF-----------FGVGLFGIDVAPWTAASLALTFYTSAFLLDIWHG 114

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+P+GQ EA+  LGL   +    V+ PQA+R  I P     + ++K ++LA  +GF 
Sbjct: 115 SIQALPKGQWEASRCLGLDFGQTLTRVIAPQAIRIAIAPTVGFAVQVIKGTALASIIGFV 174

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 175 ELTKAGTILNNVTYQPFKVFGLVALGYFLLCYPLSRYSQYLEKKF 219


>gi|323526411|ref|YP_004228564.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383413|gb|ADX55504.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 218

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    L            I +     G+++ L    L R +     + +   Y+
Sbjct: 1   MQFDISIVVAALPALLQGARLTVLITIAGLTGGVLVGLLFG-LMRAYGNAPCQKIAFAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P +V +   Y   F  P+L        +       +   ++   + A+IAEI
Sbjct: 60  EF--VRGTPIVVQVMFIY---FALPML-------LNVRVDALTAAIASIVINSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR   ++VPRG  EA +ALG+   +    V+ P A+R + P L +Q++  LK++SL + +
Sbjct: 108 VRGSFLSVPRGLKEAGLALGMPAWRVLAFVVGPVAIRRMTPALGNQFIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  I+    +A+EI      +YL +   +   + R+  ++ +
Sbjct: 168 GVGELTRQGQEIMASNFRAVEIWTAVAALYLCMIGTLTYCLRRMERRMRI 217



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 3/188 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +  +G+    ++G L G  R   N     I   YVE  R  P +V + F
Sbjct: 14  ALLQGARLTVLITIAGLTGGVLVGLLFGLMRAYGNAPCQKIAFAYVEFVRGTPIVVQVMF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y ++  +L +   ++       + N G     +   +   +       G+ L + A R+
Sbjct: 74  IYFALPMLLNVRVDALTAAIASIVINSGAYIAEIVRGSFLSVPRGLKEAGLALGMPAWRV 133

Query: 208 SRHF--HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                      +  P L     +     +L ++    +L      +   NF     +   
Sbjct: 134 LAFVVGPVAIRRMTPALGNQFIVSLKDTSLFIVIGVGELTRQGQEIMASNF-RAVEIWTA 192

Query: 266 FMSLYIAL 273
             +LY+ +
Sbjct: 193 VAALYLCM 200


>gi|206577412|ref|YP_002239488.1| arginine ABC transporter, permease protein ArtM [Klebsiella
           pneumoniae 342]
 gi|288936336|ref|YP_003440395.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510608|ref|ZP_06549978.1| arginine transport system permease artM [Klebsiella sp. 1_1_55]
 gi|206566470|gb|ACI08246.1| arginine ABC transporter, permease protein ArtM [Klebsiella
           pneumoniae 342]
 gi|288891045|gb|ADC59363.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777324|gb|EFD85322.1| arginine transport system permease artM [Klebsiella sp. 1_1_55]
          Length = 222

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S ++ ++LSL  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIIVALILSLIFTII---LTLKTPGLVWIVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L  + ++      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSLQDYPWLWHLISEP-WLCALIALSLNSAAYTTQLFYGAIRAIPD 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCSALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGIIYLIVNGLLTLLMRLVERKALAFERR 221



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 38/114 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +I A I+  +           + WI R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIIVALILSLIFTIILTLKTPGLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + D+  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPSLQDYPWLWHLISEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|296103154|ref|YP_003613300.1| arginine transporter permease subunit ArtM [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057613|gb|ADF62351.1| arginine transporter permease subunit ArtM [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 222

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S ++ ++L+L  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELMKGLHTSLTLTVASIIVALILALIFTII---LTLKTPVLVWIVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  I      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSLQEYPVIWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      +YL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGVVYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 40/114 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ WI R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASIIVALILALIFTIILTLKTPVLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPSLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|242280378|ref|YP_002992507.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
 gi|242123272|gb|ACS80968.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio salexigens DSM 2638]
          Length = 367

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/252 (21%), Positives = 110/252 (43%), Gaps = 18/252 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++  L+     V+    +   +     +         LT+  +    + +F + ++L+L 
Sbjct: 126 LLKILWFVSPIVVFALVYGGEIVGLPVVGTHYWGGLMLTIMLSIVAMLAAFPISVLLAL- 184

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       K   + YI            LI + +      P+     F+      
Sbjct: 185 ----GRTSDMPIAKPFCVAYIELIRGVP-----LITILFMASVVLPL-----FLPAGMEL 230

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
            + +   + ++ + +A++AE +R GL  + +GQ EAA ALG+++ K T +V+LPQA+R +
Sbjct: 231 DKVLRALVGITMFFSAYLAENIRGGLQGISKGQYEAADALGMSYWKKTIVVILPQALRIV 290

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIM 380
           IPP+ + ++ +LK++SL   VG  DL+ +     +     G+  E  +   F Y  L   
Sbjct: 291 IPPMVNNFIGILKDTSLVGIVGLVDLLQIAFATTSNPKWFGRLEEAYVFIAFWYWILCYA 350

Query: 381 IALFMNRLNAKI 392
           ++ +   L  K+
Sbjct: 351 LSSYSQYLERKM 362



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T    G + T  L+   M+ A  I  L+  GR S   +    C  Y+E+ R +P + ++
Sbjct: 154 GTHYWGGLMLTIMLSIVAMLAAFPISVLLALGRTSDMPIAKPFCVAYIELIRGVPLITIL 213

Query: 146 FFLYKSVLSVLP 157
           F     +   LP
Sbjct: 214 FMASVVLPLFLP 225


>gi|153824333|ref|ZP_01977000.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2]
 gi|149741887|gb|EDM55916.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2]
          Length = 222

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++ V S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTVASLLVGCILSLLMT-VSLVMRTPVVHWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKK 215



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G   +  L  + ++   I+  L+    +    +V W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLGTSLQLTVASLLVGCILSLLMTVSLVMRTPVVHWFSRAVITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I +  + +          L+    T   + ++F  +F
Sbjct: 62  LVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|224367958|ref|YP_002602121.1| GltJ1 [Desulfobacterium autotrophicum HRM2]
 gi|223690674|gb|ACN13957.1| GltJ1 [Desulfobacterium autotrophicum HRM2]
          Length = 242

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 7/221 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS    T+         S ++GI++  F     R    +  +     Y   F    +P
Sbjct: 19  WLLSGVATTVKLGIICCFLSLLMGIIIGTF-----RITRNRPLRIFAEAYTEFF--RDIP 71

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +   Y             ++     + EF  + + LS Y+++ +AE +R+G+ ++ 
Sbjct: 72  LLVQLFFWYFAMPTLLPEQTRIWMYQEIPNFEFWIVVVGLSLYSSSRMAEQIRAGINSIS 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             Q+ AA++ G +H +A R ++LP A+R +IPPLT++ L + KN++LA+ VG  +   + 
Sbjct: 132 PDQLNAALSSGFSHYQAYRYIILPLAVRLVIPPLTTEALTVFKNTALAMTVGVLETTFMS 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +   T   +E       IY+ +++++   M  L  K+A+
Sbjct: 192 QQVEAYTFHGLEATTAACIIYMIITLVVVGIMGLLEKKLAI 232



 Score = 61.5 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 40/85 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  Y   +L G   T  L       + ++G ++G  R++ N+ +      Y E FR+IP 
Sbjct: 13  EEPYGGWLLSGVATTVKLGIICCFLSLLMGIIIGTFRITRNRPLRIFAEAYTEFFRDIPL 72

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV +FF Y ++ ++LP      +  
Sbjct: 73  LVQLFFWYFAMPTLLPEQTRIWMYQ 97


>gi|330863399|emb|CBX73521.1| glutamate/aspartate transport system permease protein gltJ
           [Yersinia enterocolitica W22703]
          Length = 263

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
              S   +T+  +   +V +F +G +  +  T  +R        + +  + +PL+     
Sbjct: 41  WIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSIGACYVELFRNVPLIVQFFT 100

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+   L      +     QF           F+S  + L  +TAA + E VR+
Sbjct: 101 WYLVVPELLPADLGMWFKSELDPNIQF-----------FLSSMMCLGLFTAARVCEQVRA 149

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+TS+ LNL+KNS++A  +G  
Sbjct: 150 GIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLV 209

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M  +  K+ L
Sbjct: 210 DMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRIVEKKVQL 256



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           F   R    I     P+ +  +Y   I  GF  T  L+    + A  +G+L G  R   N
Sbjct: 17  FYVNRLELGIFLQPAPFGNT-TYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPN 75

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++++ I   YVE+FRN+P +V  F  Y  V  +LP
Sbjct: 76  RILSSIGACYVELFRNVPLIVQFFTWYLVVPELLP 110


>gi|197334943|ref|YP_002156403.1| membrane protein [Vibrio fischeri MJ11]
 gi|197316433|gb|ACH65880.1| membrane protein [Vibrio fischeri MJ11]
          Length = 246

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 10/211 (4%)

Query: 197 GIVLSLFATRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHF 246
           G +  +   R +R     +    + +P L +   L FG   L+   L          +  
Sbjct: 36  GALAKMAPYRWARSIATLYTTIVRGIPDLVLMMLLFFGGQMLLNNGLYASNEWINEWMTN 95

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P     +++        F++  + +     A++AE  R  ++AV RG+MEAA A G++
Sbjct: 96  SNPDHEWVSYLPDYIEISPFIAGVLTIGFIFGAYMAETFRGAIMAVDRGEMEAAKAYGMS 155

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              A R +L PQ +R  +P   + +L LLK ++L   +G  D+V V       T      
Sbjct: 156 GMMAFRRILFPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSSMAAGTTKMPFTF 215

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +    I+L  + +    +  +  K ++  +
Sbjct: 216 YMTVACIFLLFTAVSTGALKLIERKFSIHMR 246


>gi|238795093|ref|ZP_04638685.1| Histidine transport system permease protein hisQ [Yersinia
           intermedia ATCC 29909]
 gi|238725588|gb|EEQ17150.1| Histidine transport system permease protein hisQ [Yersinia
           intermedia ATCC 29909]
          Length = 228

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 83/214 (38%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +L +++ L      +    +           T LI G+P LVL+ L +  
Sbjct: 15  VTLELALCSVLLSVIIGLIG-AGGKLSSNRLLSGF--FECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AVP GQ+EAA A G
Sbjct: 72  LQITLNSITESIGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPSGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTPSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGVVYLVFTTVSNGVLLWLERRYSHGVKR 225


>gi|330446187|ref|ZP_08309839.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490378|dbj|GAA04336.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 223

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N +        + T+ ++ + S ++G  L+L  T ++          +    I+ F   
Sbjct: 1   MNEQHFWQLMDGLATSLQLTLVSLLVGCTLALLMT-MTLILRTSVLHWISRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y       V  + +F+      P F    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLIYYGPGQFDVTRE-SFLWDWLSQPWF-CAMLALALNTAAYSTQLFKGAFD 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ +A  ALG+   K T   LLP A+R  +P  +++ + + K +SLA  +   D++
Sbjct: 116 AIPKGQWQACRALGM-ETKTTLSTLLPFAIRRAVPAYSNEVILVFKGTSLASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I   +YL+++ ++++    +  K
Sbjct: 175 GYAQRINAQTYDTLTVFAIAGAMYLTVNAILSILFRLVEKK 215



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 39/113 (34%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  +   ++ G   +  L    ++    +  L+    +    ++ WI R  + +F   P 
Sbjct: 2   NEQHFWQLMDGLATSLQLTLVSLLVGCTLALLMTMTLILRTSVLHWISRGIITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y          +  +            L+    T   + ++F  +F
Sbjct: 62  LVQIFLIYYGPGQFDVTRESFLWDWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|89514203|gb|ABD74962.1| ABC transporter [Sinorhizobium kostiense]
          Length = 176

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 18/182 (9%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VLG+V ++      R          PL      L+  L +  L+   + +++  P     
Sbjct: 1   VLGLVFAIAQRTPFR----------PLTVTVRELVEFLRSTPLVLQIFFVYYVGPEY--- 47

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                      +++  IA+  + AA+++E+ R G+ +VP+GQ EA  A+ LT  +  R +
Sbjct: 48  -----GVSLSPWVAGMIAIGLHYAAYLSEVYRGGIESVPKGQWEACTAINLTTAQTYRRI 102

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+   +  + +  +++ K++ +   +G A+L+     I  Q  + +E   I   ++
Sbjct: 103 ILPQALPLSVAGMGNYPISIFKDTPMLSVIGVAELMQAATAIGGQNYRYLEPYTIVGVVF 162

Query: 375 LS 376
           L 
Sbjct: 163 LV 164


>gi|153837587|ref|ZP_01990254.1| membrane protein [Vibrio parahaemolyticus AQ3810]
 gi|149749084|gb|EDM59895.1| membrane protein [Vibrio parahaemolyticus AQ3810]
          Length = 229

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 7/212 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G++L++     S     +     P     T +      LV++ + + 
Sbjct: 15  WMTVQLAFTSLLVGLILAVVFA--SGEMARRAFVKWPTTAFVTVVRGLPEILVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  +ALS   A++ ++ +R  L AV RGQ EAA AL
Sbjct: 73  -----STQVLFLITGDFIEVSPFLSGVVALSLIFASYASQTLRGALKAVGRGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GISQFHAFVRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    IYL ++++    +  ++ K +++
Sbjct: 188 FTWYATAAAIYLVITLITQRAVKVIDKKFSIQ 219


>gi|303248477|ref|ZP_07334735.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302490097|gb|EFL50017.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 253

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 18/258 (6%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
               R +   V++  L   +   L    +           +  ++   +T+  +A   V 
Sbjct: 3   WSTPRWLVRAVLLASLTAGLWVALSHIQYHWDWNAVWGYRDIFIAGLGMTVYVSAGAIVL 62

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
               G+   L     +          +  LY+  F   G P LV I + Y          
Sbjct: 63  GLFFGLASGL-----ASVSGNVWLTEMAALYVGAF--RGTPLLVQILIFY---------- 105

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F       V   ++   + L+ ++ A+I+E+VR+G+ ++  GQ E A++ GLTHR+   
Sbjct: 106 -FCVGVVIHVDSPYVIGTVTLAFFSGAYISEMVRAGVESIDVGQWETALSSGLTHRQTLF 164

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V+ PQA+R I+PP+T Q+++ +K+SSL   +   +L      + + T +  E  L    
Sbjct: 165 YVIFPQAIRRIVPPVTGQFVSCIKDSSLLSVISVRELTKAAEVVNSTTYKTFEAYLPLAL 224

Query: 373 IYLSLSIMIALFMNRLNA 390
           +YL L+  ++    RL  
Sbjct: 225 LYLLLTWPLSHLTGRLER 242



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 4/90 (4%)

Query: 67  RAGFEIDQGIVPYTSDSS----YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
            AG  +    + Y  D +    Y    + G   T +++   ++     G   G   +S N
Sbjct: 19  TAGLWVALSHIQYHWDWNAVWGYRDIFIAGLGMTVYVSAGAIVLGLFFGLASGLASVSGN 78

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
             +  +  +YV  FR  P LV I   Y  V
Sbjct: 79  VWLTEMAALYVGAFRGTPLLVQILIFYFCV 108


>gi|317053433|ref|YP_004119200.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953172|gb|ADU72644.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 230

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 11/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              ++    T+       V   V G  L++           +  +   L+ +++  +  +
Sbjct: 16  YLFMTGMRFTLSLTLCATVIGIVFGTALAIM----------RLSRFPLLVMLASSYVNLM 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            +L L+ + +  +F  P L Q+       V    F S  I  + + A +  EIVRSG+ +
Sbjct: 66  RSLPLVLVIFWFYFLVPYLLQWLTGSSFPVRVDPFWSSVITFTLFEACYFCEIVRSGIQS 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ  AA+ALGLT  ++   V+LPQAMR+++P   +Q + L +++SL   +   D + 
Sbjct: 126 LPRGQSSAALALGLTPAQSLLYVILPQAMRNMLPLFLTQTIILFQDTSLVYVLSITDFLG 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +  + G+ +E+ L    +Y  +S   +  +  L  +I++  
Sbjct: 186 AAAKVAQRDGRLLEMYLFAAAVYFLISYGASCGVRYLQKRISIVR 230



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 10/161 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  L     +   + GT +   RLS   L+  +   YV + R++P ++VIF+ 
Sbjct: 18  FMTGMRFTLSLTLCATVIGIVFGTALAIMRLSRFPLLVMLASSYVNLMRSLPLVLVIFWF 77

Query: 149 YKS--VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF--------SFVLGI 198
           Y     L          V     + +    +                       S  L +
Sbjct: 78  YFLVPYLLQWLTGSSFPVRVDPFWSSVITFTLFEACYFCEIVRSGIQSLPRGQSSAALAL 137

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            L+   + L     +     LPL    T ++F   +LV + 
Sbjct: 138 GLTPAQSLLYVILPQAMRNMLPLFLTQTIILFQDTSLVYVL 178


>gi|206559443|ref|YP_002230204.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|198035481|emb|CAR51359.1| histidine transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 237

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 8/224 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +F + + LS   +T+          FV  + L++     ++                T+
Sbjct: 12  FLFWDGQRLSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSMPV-------RFYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +    +   + +  +     F    +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLLMYTGMYSLEFVRSHSLLD-AFFRSGFNCAILAFALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A      
Sbjct: 124 AIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ V     + T  A +   I   IYL++S  +     R    
Sbjct: 184 DILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S NK V+   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKNKWVSMPVRFYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|319779862|ref|YP_004139338.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317165750|gb|ADV09288.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 224

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 14/192 (7%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R +  K  + L + Y   F    +  +VLI + Y L F    L              +
Sbjct: 47  LVRLYAPKPLRWLAVGYTDIFRALPV-LVVLILIYYALPFLGIRL------------SSW 93

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S   A +   +A+ AE+ RSG+ ++PRGQ EA+ ALGL      R V+LPQA+R +IPP
Sbjct: 94  ASAVTAFAFIMSAYSAEVFRSGIESIPRGQFEASQALGLPFLLTLRKVVLPQAIRVVIPP 153

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +TS  +++ K++SLA  V   +L+       +        ++    +YL     +   ++
Sbjct: 154 MTSNCVSMFKDTSLASTVALPELLKEATNAQSLYANP-SPLIGAALVYLIFLWPMVRLVS 212

Query: 387 RLNAKIALKEKK 398
            L  +   ++K+
Sbjct: 213 LLEERFKTEKKR 224



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 36/77 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L GF+NT  L    +     IG  +   RL A K + W+   Y ++FR +P LVV+  
Sbjct: 19  ALLRGFLNTLLLGILSIGIGIPIGLGISLVRLYAPKPLRWLAVGYTDIFRALPVLVVLIL 78

Query: 148 LYKSVLSVLPIPDHSIV 164
           +Y ++  +         
Sbjct: 79  IYYALPFLGIRLSSWAS 95


>gi|24112048|ref|NP_706558.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 301]
 gi|30062159|ref|NP_836330.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 2457T]
 gi|157160141|ref|YP_001457459.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli HS]
 gi|170020990|ref|YP_001725944.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|188495911|ref|ZP_03003181.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli 53638]
 gi|300920531|ref|ZP_07136957.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|24050872|gb|AAN42265.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 301]
 gi|30040404|gb|AAP16136.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 2457T]
 gi|157065821|gb|ABV05076.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli HS]
 gi|169755918|gb|ACA78617.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|188491110|gb|EDU66213.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli 53638]
 gi|281600012|gb|ADA72996.1| Glutamate/aspartate transport system permease [Shigella flexneri
           2002017]
 gi|300412470|gb|EFJ95780.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|313649701|gb|EFS14125.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           flexneri 2a str. 2457T]
          Length = 224

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVSW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   V+W  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|295676192|ref|YP_003604716.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295436035|gb|ADG15205.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 229

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 2/190 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +A+   Y  T LI  +P LVL+ L +                       F +
Sbjct: 39  KLSFNRPLRAVATGY--TTLIRSVPDLVLMLLLFYSIQMAVNDVTDALDLPQFDIDPFAA 96

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L     A+  E  R   +AVPRGQ+EA  A G++  +    +L PQ MR  +P + 
Sbjct: 97  GVLTLGFIYGAYFTETFRGAFLAVPRGQLEAGSAYGMSGVRVFTRILFPQMMRFALPGIG 156

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +  L+K ++L   +G AD+V         T      I++   IYL+++ +  + +  L
Sbjct: 157 NNWQVLVKATALVSIIGLADVVKAAQDAGKSTFNMFFFIMVAALIYLAITTVSNVALIWL 216

Query: 389 NAKIALKEKK 398
           N + ++  + 
Sbjct: 217 NRRYSIGVRH 226


>gi|126652699|ref|ZP_01724860.1| hypothetical protein BB14905_23073 [Bacillus sp. B14905]
 gi|126590548|gb|EAZ84666.1| hypothetical protein BB14905_23073 [Bacillus sp. B14905]
          Length = 234

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 7/230 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L  + L      +   A+I VFS + G+VL +    + +  +    K L  +YIS
Sbjct: 4   NFDFVLIAKVLPTLLQYLPVTAEILVFSILFGMVLGIML-AIPKLLNVAGLKQLITIYIS 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G P LV + L +   +  P L +   I   T       + I  +   AA  AEI 
Sbjct: 63  F--IRGTPILVQLFLVF---YGVPALLKLIHID-VTRMDAMYFVIITYTLSNAAAFAEIF 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+ ++ V RGQMEAA ++GL+  +A   ++ PQA+R   P + +  ++ LK++SLA ++G
Sbjct: 117 RAAILTVDRGQMEAAYSVGLSGPQAFLRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             D+V  G  +I  T +A EI +    +Y ++ I++              
Sbjct: 177 VMDMVGRGEALIASTTRAFEIYVALSIVYFAIVIILEKIFKFNERYFNRY 226


>gi|110347170|ref|YP_665988.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283281|gb|ABG61341.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Chelativorans sp. BNC1]
          Length = 243

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/186 (30%), Positives = 100/186 (53%), Gaps = 3/186 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +   Y+  F    +P LV + L Y +  +       N++  +  +  F +
Sbjct: 54  RTMPSGPAQRIASAYVELF--RNIPFLVQLFLWYFVLPELLPQSMGNWLK-ALPNSAFWT 110

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  Y +A +AE +R+G+ ++PRGQ  A  A+GLT  +  R VLLP A R I+PPLT
Sbjct: 111 TVLGLGFYMSARVAEQLRAGISSLPRGQKLAGAAIGLTTPQTYRYVLLPMAFRIILPPLT 170

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S++LN +KN+S+A+ +G  +L +    +   T Q  E   +   +YL+++I++ + M  L
Sbjct: 171 SEFLNTIKNTSVALTIGLVELTARARAMQEFTFQIFEAFTVATVLYLTVNILVTIGMRYL 230

Query: 389 NAKIAL 394
             ++A+
Sbjct: 231 EHRVAV 236



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 35/79 (44%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               SY   +L G   T   A    + A  +G +VG  R   +     I   YVE+FRNI
Sbjct: 16  DGSGSYLEMLLRGLQVTLVTAVGAWLLALALGLVVGVMRTMPSGPAQRIASAYVELFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLPI 158
           P LV +F  Y  +  +LP 
Sbjct: 76  PFLVQLFLWYFVLPELLPQ 94


>gi|296271505|ref|YP_003654137.1| polar amino acid ABC transporter inner membrane subunit
           [Thermobispora bispora DSM 43833]
 gi|296094292|gb|ADG90244.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobispora bispora DSM 43833]
          Length = 290

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 13/254 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++ +   +      + +               L    L +           VLG+ ++L
Sbjct: 44  IIVVWAVTASPGWPRVQETFFSPAAFAAAFPDVLRGFLLNIKIFLIAEPLILVLGLAVAL 103

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
             +  S  F     +A+ +LY   F       LV     Y + F  P L     + G+  
Sbjct: 104 VRSLRSPVFF--PLRAVAVLYTDIFRGIPTILLV-----YLVGFGIPALQ----LQGAPT 152

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P      IAL     A++AE+ RSG+ ++   Q  AA +LGLTH +  R V+LPQA+R 
Sbjct: 153 DP-VTLGIIALVLSYGAYVAEVFRSGIESIHPSQRAAARSLGLTHGQTMRHVVLPQAIRR 211

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPPL + + +L K+S+L   +G  + +                 L    +++ L++ +A
Sbjct: 212 VIPPLLNDFASLQKDSALVAVLGPLEALRQAQIHTASMFNYTP-YLASALLFIVLTVPMA 270

Query: 383 LFMNRLNAKIALKE 396
            F + L  + A ++
Sbjct: 271 RFTDHLAERAARRQ 284


>gi|227823072|ref|YP_002827044.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342073|gb|ACP26291.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 215

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L            + + +F  G  + L     +R       +     YI+ F  
Sbjct: 4   FTFWDILRNLLFATRWTLLLSIVAFAGGAAVGLLIL-FARIAKRPWLRRFGAGYIALF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L       G  + P + +  + L+ Y +A++AEI R G+
Sbjct: 61  QGTPLLMQLFLMF---FGLPML-------GFRIEP-WTAAALGLTFYASAYLAEIWRGGV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRGQ +A  +LGL + +  RLV+LPQA     PP     + L+K+++L   +GF +L
Sbjct: 110 EALPRGQWDAGASLGLHYLQELRLVILPQAFAITRPPAVGFLVQLIKSTALTSIIGFEEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +     I N T +   +  +   I+  L   +  +   L  +
Sbjct: 170 LRTANAINNATFEPFTVYGLVAAIFFVLCYPLTQYARLLERR 211



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L     T  L+         +G L+   R++    +      Y+ +F+  P L
Sbjct: 7   WDILRNLLFATRWTLLLSIVAFAGGAAVGLLILFARIAKRPWLRRFGAGYIALFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + +F ++  +  +    +       G+                 A 
Sbjct: 67  MQLFLMFFGLPMLGFRIEPWTAAALGLTFYASAYLAEIWRGGVEAL 112


>gi|238854604|ref|ZP_04644937.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 269-3]
 gi|282933427|ref|ZP_06338806.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 208-1]
 gi|238832789|gb|EEQ25093.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 269-3]
 gi|281302441|gb|EFA94664.1| L-cystine transport system permease protein TcyB [Lactobacillus
           jensenii 208-1]
          Length = 225

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 8/197 (4%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           + +L      +    K G    L    TF ++   +  L+   + + +  P +       
Sbjct: 37  ITALIRMSTPKGNPLKKGFWHFLKAFFTFYVWLFRSTPLLVQLFIVFYGLPSI------- 89

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                  + +  +  S  T A+ +E +R+ ++AVP+ Q EAA ++GL + K    V+ PQ
Sbjct: 90  -GIQLGAWTAGILTFSLNTGAYASETIRASILAVPQDQWEAAYSIGLPYHKVLSRVIFPQ 148

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  IPPL++ ++ L+K++SLA ++   ++  V   I +   Q + +  I   IY    
Sbjct: 149 AIRIAIPPLSNSFIGLVKDTSLASSITLVEMFMVSQEIASHNYQPMLMYSIVAIIYAIFC 208

Query: 379 IMIALFMNRLNAKIALK 395
            +++L    L  +  +K
Sbjct: 209 SLLSLLQLYLEKRFEVK 225


>gi|107022253|ref|YP_620580.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116689198|ref|YP_834821.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170732504|ref|YP_001764451.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|254245860|ref|ZP_04939181.1| Amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|105892442|gb|ABF75607.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647287|gb|ABK07928.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|124870636|gb|EAY62352.1| Amino acid ABC transporter, permease protein [Burkholderia
           cenocepacia PC184]
 gi|169815746|gb|ACA90329.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 237

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 8/224 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +F + + LS   +T+          FV  + L++     ++                T+
Sbjct: 12  FLFWDGQRLSGLAVTLWLLVASISLGFVCAVPLAVARVSRNKWVSMPV-------RFYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +    +   + +  +     F    +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLLMYTGMYSLEFVRSHSLLD-AFFRSGFNCAILAFALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+P G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A      
Sbjct: 124 AIRAIPHGEVEAARAYGMSPFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ V     + T  A +   I   IYL++S  +     R    
Sbjct: 184 DILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S NK V+   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSRNKWVSMPVRFYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|262044438|ref|ZP_06017499.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|330010549|ref|ZP_08306782.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|259038218|gb|EEW39428.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|328534486|gb|EGF61074.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 225

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 11/225 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G+             +       + S V     +L    L         +   L+     
Sbjct: 6   GLMTTFTDWDIIRNLLLAGRWTVLLSLVAFTGGALVTLPLLLLRLTGGRQVKRLIRGYIE 65

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L  G P L+ + L +           F           + +  +AL+ YT+AF+ +I   
Sbjct: 66  LFQGTPLLMQLFLAF-----------FGVALFGVDVSAWTAASVALTLYTSAFLLDIWFG 114

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+P+GQ EA+  LGL+  +    V+ PQA+R  I P     + ++K ++LA  +GF 
Sbjct: 115 SIRALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFV 174

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L   G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 175 ELTKAGTMLTNVTYQPFKVFALVALGYFILCYPLSRYSRYLENKF 219


>gi|238795092|ref|ZP_04638684.1| Histidine transport system permease protein hisM [Yersinia
           intermedia ATCC 29909]
 gi|238725587|gb|EEQ17149.1| Histidine transport system permease protein hisM [Yersinia
           intermedia ATCC 29909]
          Length = 216

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 4/209 (1%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M     + + S V+G +L++    ++R    +  +    ++I T++  G P  V + + Y
Sbjct: 1   MAVTLWLLISSVVMGGLLAIPL-AVARVAERRWIRL--PVWIFTYIFRGTPLYVQLLVFY 57

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +   ++   + +  +          +AL+  T A+  EI    + +VP G++EAA A
Sbjct: 58  SGMYSLEIVRGNDLL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVPHGEIEAARA 116

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G +  K  R ++LP A+R  +P  +++ + +L +++LA      D++ +   I   T Q
Sbjct: 117 YGFSRFKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQ 176

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I   +YL +S  +     +   +
Sbjct: 177 PFYAFGIAAVLYLIISFTLISLFRQAEKR 205


>gi|170683230|ref|YP_001742770.1| glutamate/aspartate ABC transporter permease GltK [Escherichia coli
           SMS-3-5]
 gi|170520948|gb|ACB19126.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli SMS-3-5]
          Length = 224

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+ H ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMNHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|326693633|ref|ZP_08230638.1| glutamine ABC transporter, permease protein [Leuconostoc argentinum
           KCTC 3773]
          Length = 213

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 14/207 (6%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                 F  ++G V       L       T + L   YI  +++ G P L+ +   Y   
Sbjct: 17  MTLGVFFITIIGSVPLGIIVALGMKSPYFTIRWLINGYI--WVMRGTPLLLQLIFVYY-- 72

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                             P F +  IA     AA++AEI R GL A+PRGQ +AA  LG 
Sbjct: 73  ---------GLGMMGITFPRFEAATIAFIVNYAAYLAEIFRGGLQAIPRGQYDAAKVLGF 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +    ++LPQ ++ I+P   ++ +NL+K++SL   +G  DL+  G    ++    + 
Sbjct: 124 TRVQTFFKIILPQVIKIIVPSFGNEVINLVKDTSLVYVIGLGDLLRAGNIAASRD-VTLV 182

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
             L+   IYL ++ ++ + + R   ++
Sbjct: 183 PYLLVGLIYLLMTAVVTVLLRRSETQL 209



 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  + F  +I +  +G +V  G  S    + W+   Y+ V R  P L+ + F+
Sbjct: 11  LMSGLKMTLGVFFITIIGSVPLGIIVALGMKSPYFTIRWLINGYIWVMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  +  +               +N              A 
Sbjct: 71  YYGLGMMGITFPRFEAATIAFIVNYAAYLAEIFRGGLQAI 110


>gi|301595883|ref|ZP_07240891.1| Histidine transport system permease protein hisQ [Acinetobacter
           baumannii AB059]
          Length = 218

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 9/216 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S ++G++ +      S+  + K  + +   Y  T LI  +P L
Sbjct: 11  LSGTWMTIQLALLSLLLSVIIGLIGA-----SSKLSNIKALRYVATAY--TTLIRSVPDL 63

Query: 236 VLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           V++ L +  L      + +   +    ++P F++  I L+    A+  E  R    +VPR
Sbjct: 64  VIMLLLFYSLQLGLNQITEALQMDQIDINP-FVAGVITLAFIYGAYFTETFRGAFQSVPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA+A G+T  +    VL PQ MR  +P + + +  L+K ++L   +G  D+V +  
Sbjct: 123 GQIEAAMAYGMTPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKITQ 182

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                T Q     ++   IYL+++ +  L +  L  
Sbjct: 183 DAGRSTMQLFFFSIVAAAIYLAITTVSNLILIWLER 218


>gi|269102813|ref|ZP_06155510.1| arginine ABC transporter permease protein ArtM [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162711|gb|EEZ41207.1| arginine ABC transporter permease protein ArtM [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 224

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 6/222 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +N          + T+ ++ V S  +G  L+L  T LS          L    I  F  
Sbjct: 1   MMNEHYFWQLVEGLGTSLQLTVVSLAVGCTLALLMT-LSLILKTPVISQLNKGIIILFT- 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV I L Y        +   +F+      P F    +AL+  TAA+  ++ +   
Sbjct: 59  -GTPLLVQIFLVYYGPGQFEAVRN-SFVWHWLSQPWF-CAMLALALNTAAYSTQLFKGAF 115

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ  A  ALG+  R++   VLLP A+R  +P  +++ + + K +SLA  +   DL
Sbjct: 116 NAIPSGQWLACRALGMNTRQSLG-VLLPFAIRRAVPAYSNEVILVFKGTSLASTITIMDL 174

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +     I  QT   + +  I   +YL ++ ++ L   ++  +
Sbjct: 175 MGYAQRINGQTYDTLTVFGIAGAMYLLVNGILTLIFRQIEKR 216


>gi|241759139|ref|ZP_04757247.1| ArtM protein [Neisseria flavescens SK114]
 gi|241320558|gb|EER56835.1| ArtM protein [Neisseria flavescens SK114]
          Length = 219

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAIPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  L L+K +S+  
Sbjct: 103 EAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANVLFLMKETSVVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +I  
Sbjct: 163 AVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIRR 214



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|169829527|ref|YP_001699685.1| polar amino acid transport system permease [Lysinibacillus
           sphaericus C3-41]
 gi|168994015|gb|ACA41555.1| polar amino acid transport system permease protein [Lysinibacillus
           sphaericus C3-41]
          Length = 234

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 7/220 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +   A+I VFS + GIVL +    + +  +    K +  +YIS   I G P L
Sbjct: 14  LPTLLQYLPVTAEILVFSIIFGIVLGIML-AIPKLLNVALLKQIITIYISF--IRGTPIL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L +   +  P L +F  I  + +   +  + I  +   AA  AEI R+ ++ V RG
Sbjct: 71  VQLFLVF---YGVPALLKFIHIDVTRLDAMYF-VIITYTLSNAAAFAEIFRAAILTVDRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA ++GL   +A   ++ PQA+R   P + +  ++ LK++SLA ++G  D+V  G T
Sbjct: 127 QIEAAFSVGLNGPQAFLRIVFPQAIRVAFPNIANTMISSLKDTSLAFSIGVMDMVGRGET 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +I  T +A EI +    +Y ++ I++              
Sbjct: 187 LIASTTRAFEIYVALSIVYFAIVIILEKIFKFNERYFNRY 226



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 34/83 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +    +I   ++G ++   +L    L+  I  +Y+   R  P LV +F +
Sbjct: 17  LLQYLPVTAEILVFSIIFGIVLGIMLAIPKLLNVALLKQIITIYISFIRGTPILVQLFLV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFL 171
           +  V ++L      +     M+ 
Sbjct: 77  FYGVPALLKFIHIDVTRLDAMYF 99


>gi|116670305|ref|YP_831238.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116610414|gb|ABK03138.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Arthrobacter sp. FB24]
          Length = 232

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 16/228 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    L +  L       +   +  L +  +    RLS+H+     +    ++I  F  
Sbjct: 4   IIEYAPLLWQGLLTTLLVTVLGGALCLVVAFAAGLARLSKHW---ILRWPAGVFIEVF-- 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G   LV +   + L F  P         G  + P   +  +AL     A+ AE+VR  +
Sbjct: 59  RGTSLLVQM---FWLFFALPFF-------GIQLHP-LTAAVLALGLNEGAYAAEVVRGAI 107

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +  +GQ EA IALG+      R +++PQ++ +++PP  +  ++LLKN+SL   V  ADL
Sbjct: 108 ASRAKGQTEACIALGMEPALRLRRIIIPQSIPAMLPPFGNVMVDLLKNTSLVSLVTVADL 167

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 I + TGQ   I +  + +Y +LS ++ L  + L  + AL  K
Sbjct: 168 TFSAQMIRSTTGQTTAIFITILVMYFALSYLLTLLTSWLEKRFALDRK 215



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 34/69 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  +  G + T  +   G     ++    G  RLS + ++ W   V++EVFR    LV 
Sbjct: 7   YAPLLWQGLLTTLLVTVLGGALCLVVAFAAGLARLSKHWILRWPAGVFIEVFRGTSLLVQ 66

Query: 145 IFFLYKSVL 153
           +F+L+ ++ 
Sbjct: 67  MFWLFFALP 75


>gi|116254189|ref|YP_770027.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258837|emb|CAK09943.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 215

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 14/224 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L            + + +F  G ++ L     +R    +  ++    YI+ F  
Sbjct: 4   FTFWDILRNLVFATRWTLLLSLAAFAGGAIVGLAILS-ARISKTRWPRSFASGYIALF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L              + +    L+ Y +A++AEI RSG+
Sbjct: 61  QGTPLLMQLFLMF---FGLPML--------GFRIESWTAAVCGLTFYASAYLAEIWRSGV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ +AA +LGL      RL++LPQA R    P     + L+K+++LA  +GF +L
Sbjct: 110 EAVPRGQWDAAASLGLHRLLELRLIILPQAFRITRAPTVGFLVQLIKSTALASILGFDEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     I N T +  ++  +   I+ +L   +  +   L  K A
Sbjct: 170 LKTANAINNATFEPFKVYGLVALIFFALCYPLTQYARFLEKKAA 213



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/105 (12%), Positives = 33/105 (31%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 ++     T  L+ +      I+G  + + R+S  +        Y+ +F+  P L
Sbjct: 7   WDILRNLVFATRWTLLLSLAAFAGGAIVGLAILSARISKTRWPRSFASGYIALFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F ++  +  +    +       G+                 A
Sbjct: 67  MQLFLMFFGLPMLGFRIESWTAAVCGLTFYASAYLAEIWRSGVEA 111


>gi|295699312|ref|YP_003607205.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438525|gb|ADG17694.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 216

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 18/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+  +    V  F +GI   + + RLS+H   +                     
Sbjct: 15  LHAAFATVGISLTGLVIGFFVGI--GVCSARLSQHRAAR---------------LAGGAY 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V       +     ++       G  VSP  ++   A+S  +A++IAEI+R G +++P G
Sbjct: 58  VFFFRGVPMLVQLLLVYYLLPFAGINVSP-IVAAISAVSLCSASYIAEILRGGFLSIPPG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
            +EAA  LGL+     R +L+PQA R  +P L ++ + L+K SSL   VG A+L      
Sbjct: 117 HLEAARMLGLSPLDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQN 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I   T + +E  +    IY  +   +AL  +    ++
Sbjct: 177 IAASTYRPLEAYVAAGLIYFVICGSLALVAHAAEHRL 213


>gi|253689673|ref|YP_003018863.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756251|gb|ACT14327.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 218

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 13/224 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M   +  +    L       +   +  +G  L  F   L R    K       LY   F 
Sbjct: 2   MAFTDWDIVRNLLLAARWTLLLSLTAFIGGALVTFPLMLLRLTKRKWPTRFVHLYSELF- 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P L+ + L +           F           + +  +AL+ +T+AF+ +I    
Sbjct: 61  -QGTPLLMQLFLAF-----------FGLALFGIDVSPWTAAALALTLFTSAFLVDIWCGS 108

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P+GQ EA+  LGL   +    V+ PQAMR  I P     + ++K ++LA  +GF +
Sbjct: 109 VEALPKGQWEASRCLGLDFGQTLYRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVE 168

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 169 LTKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSYYSRYLEKKF 212


>gi|325272612|ref|ZP_08138971.1| ABC-type arginine transport system, permease component [Pseudomonas
           sp. TJI-51]
 gi|324102254|gb|EGB99741.1| ABC-type arginine transport system, permease component [Pseudomonas
           sp. TJI-51]
          Length = 229

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 3/211 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ + S VL + L L     ++   +   + L   Y  T LI  +P LV++ L +    
Sbjct: 18  IQLALMSMVLAVTLGLIGAS-AKLSKQPLLRHLAAGY--TTLIRSVPDLVIMLLLFFSLQ 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F +  + L     A+  E  R    +VP GQ+EAA+A G+ 
Sbjct: 75  IWLNNLTEWLDTEQIDINPFAAGVLTLGFIYGAYFTETFRGAFQSVPAGQLEAAVAYGMN 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+    VL PQ MR  +P + + +  L+K ++L   +G  D+V V       +      
Sbjct: 135 RRQVFVRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLIDIVKVTQDAGKNSMDLFFF 194

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++   IYL+L+ +    +  L  + ++  +
Sbjct: 195 SVVGGLIYLALTTVSNGVLMWLERRYSVGVR 225



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 37/78 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + IL G + T  LA   M+ A  +G +  + +LS   L+  +   Y  + R++P LV+
Sbjct: 6   YGSLILEGTLATIQLALMSMVLAVTLGLIGASAKLSKQPLLRHLAAGYTTLIRSVPDLVI 65

Query: 145 IFFLYKSVLSVLPIPDHS 162
           +  L+ S+   L      
Sbjct: 66  MLLLFFSLQIWLNNLTEW 83


>gi|312965093|ref|ZP_07779330.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 2362-75]
 gi|312290184|gb|EFR18067.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 2362-75]
          Length = 224

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLNGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLNGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|300716052|ref|YP_003740855.1| Arginine 3rd transport system permease protein [Erwinia billingiae
           Eb661]
 gi|299061888|emb|CAX59004.1| Arginine 3rd transport system permease protein [Erwinia billingiae
           Eb661]
          Length = 222

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S +L +V +L  T +         + +   YI+ F   G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASLILALVFALIFTVIL-SLKVPVLRLVVRGYITLFT--GTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P +    ++      P ++   +ALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSIQAIPWLWHLLSQP-WLCALLALSLNSAAYTTQLFYGAMRAIPA 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+  ALG+  ++    +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWESCAALGMNRKETL-RILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  +    E++
Sbjct: 179 LLYGRTYD-VTVFAAAGLIYLCVNGLLTLMMRIIERRALAFERR 221



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 3/94 (3%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY   +L G   +  L  + +I A +   +          ++  + R Y+ +F   P LV
Sbjct: 3   SYLPELLKGLHTSLTLTVASLILALVFALIFTVILSLKVPVLRLVVRGYITLFTGTPLLV 62

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            IF +Y         P    +      L+   L 
Sbjct: 63  QIFLIYYGPGQ---FPSIQAIPWLWHLLSQPWLC 93


>gi|227327914|ref|ZP_03831938.1| L-amino acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 364

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 72/340 (21%), Positives = 133/340 (39%), Gaps = 54/340 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G     G+ P         A+ +G ++         I    + ++   GR  
Sbjct: 74  WVFIHARFG-HFMYGLYPAEEVWRINFALAIGLLS---------ILPMFLKSIPYRGR-- 121

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  + PLV  + LY                     +        T
Sbjct: 122 -----------YIAVWTVVYPLVAWWLLYGG-------------FGGLSRVETYQWGGLT 157

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 158 LTLIIAAVGIAGALPLGILLAL-----GRRSTLPIVRMLSVVFIEFWRGVPLITVLFMS- 211

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 212 ---------SVMLPLFLTEGTTIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 262

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + +   LV+LPQA++ +IP L +  ++L K++SL + +G  DL S         
Sbjct: 263 ESLGLGYWRMQGLVILPQALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFSSIQQATVDP 322

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G + E  +    +Y      ++ +   L  +     K
Sbjct: 323 TWLGMSTEGYVFAAMVYWIFCFSMSRYSQHLENRFNTGHK 362


>gi|224437529|ref|ZP_03658487.1| polar amino acid ABC transporter, inner membrane subunit
           [Helicobacter cinaedi CCUG 18818]
 gi|313143980|ref|ZP_07806173.1| polar amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129011|gb|EFR46628.1| polar amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 235

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 11/204 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             ++G ++++  T  +     +        Y+  F   G P +V +   Y +     +L 
Sbjct: 41  GVIVGTLVAIAITHKTPSIPHRILCVFLKAYVGFF--RGTPIVVQLLFIYFV-----ILP 93

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F   G        +   +     + A+++EI+RSG++++ +GQ EAA ALGL+   + R
Sbjct: 94  AFGLKG----MSALLVAVVIFGLNSGAYVSEIIRSGILSIDKGQDEAARALGLSSSLSMR 149

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ PQA+++ +P L ++++ LLK +S+A  +   DL     +I + T + +        
Sbjct: 150 YIIFPQALKNSLPTLGNEFIALLKETSVANYITVHDLTYAFKSIGSATYEYMFPYFFLAL 209

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
            YL L +  +  +     K+   +
Sbjct: 210 AYLLLVMCASYLVKLYERKLRASD 233


>gi|221065074|ref|ZP_03541179.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220710097|gb|EED65465.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 250

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 10/225 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   +   L +          + + S V+ +VL      L           L   ++  
Sbjct: 22  FGKNGDITYLDWMMSAWGWTVAVALLSLVIALVLGAVIGTLRTLPDRPWIVRLGNAWVEL 81

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV + + Y +            +      P F+ +  A+  +T+A IAE VR
Sbjct: 82  F--RNIPLLVQVFIWYHVIPAM--------VPAMKSLPGFVLVVFAIGFFTSARIAEQVR 131

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ A+PRGQ  A +A+G T  +  R VLLP A R IIPPLTS+ +N+ KNSS+A AV  
Sbjct: 132 SGIQALPRGQRYAGMAVGFTTFQTYRYVLLPMAFRIIIPPLTSEAMNVFKNSSVAFAVSV 191

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A+L         +T + +EI L    +Y+  + +I   M  +  +
Sbjct: 192 AELTMFAMQAQEETARGVEIYLAVTGLYVISAFIINRIMAFIEKR 236



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 1/101 (0%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWIC 129
           E+ Q       D +Y   ++  +  T  +A   ++ A ++G ++G  R       +  + 
Sbjct: 16  EVGQSCFGKNGDITYLDWMMSAWGWTVAVALLSLVIALVLGAVIGTLRTLPDRPWIVRLG 75

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
             +VE+FRNIP LV +F  Y  + +++P           +F
Sbjct: 76  NAWVELFRNIPLLVQVFIWYHVIPAMVPAMKSLPGFVLVVF 116


>gi|153951169|ref|YP_001398026.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|152938615|gb|ABS43356.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. doylei 269.97]
          Length = 247

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/253 (22%), Positives = 120/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V+ +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVVSYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFN 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++      R    KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAIL-----RFSKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +   R S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFNLAILRFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|86150250|ref|ZP_01068477.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839366|gb|EAQ56628.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 247

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V+ +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVVSYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++           KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAILHF-----SKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +     S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFSLAILHFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|162418405|ref|YP_001604959.1| histidine transport system permease HisM [Yersinia pestis Angola]
 gi|162351220|gb|ABX85168.1| histidine ABC transporter, permease protein HisM [Yersinia pestis
           Angola]
          Length = 238

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    M     + + S V+G +L+L    ++R    +  +    ++I T++  G P
Sbjct: 14  WSDGYRFTGMAVTLWLLISSVVMGGLLALPL-AVARVSERRWIRL--PVWIFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   + +  +          +AL+  T A+  EI    + +VP
Sbjct: 71  LYVQLLVFYSGMYSLEIIRGNDLL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A R  +P  +++ + +L +++LA      D++ + 
Sbjct: 130 HGEIEAARAYGFSRFKLYRCIILPAASRISLPAYSNEVILMLHSTALAFTATVPDILKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YLS+S  +     +   +
Sbjct: 190 RDINAATYQPFYAFSIAAVLYLSISFTLISLFRQAEKR 227



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 84  SYATAIL-------VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
            Y  A+L        G   T WL  S ++   ++   +   R+S  + +     ++  +F
Sbjct: 7   QYWQALLWSDGYRFTGMAVTLWLLISSVVMGGLLALPLAVARVSERRWIRLPVWIFTYIF 66

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           R  P  V +   Y  + S+  I  + ++  F 
Sbjct: 67  RGTPLYVQLLVFYSGMYSLEIIRGNDLLNAFF 98


>gi|328947350|ref|YP_004364687.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328447674|gb|AEB13390.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 224

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 102/235 (43%), Gaps = 14/235 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +   F      + L+    +   + ++F  + +  + L+LF     R    K    
Sbjct: 1   MIEFLSEYFLRIKIGKLLAVMLQSTCVSLEVFFLTLIFSVPLALFIC-FGRMSAVKIVAG 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +  L+    +I G P ++ +   Y   F   ++    F         F +  +A+    A
Sbjct: 60  ITNLF--LLIIRGTPLMLQLIFVY---FAPQMIFGIGF-------DRFTAAIVAMVINYA 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R G+ ++P GQ EAA  LG T  +    +++PQ ++ IIPP+ ++ + L+K++
Sbjct: 108 AYFAEIYRGGIQSIPFGQYEAAKVLGFTKNQTFFRIIIPQVVKRIIPPMGNEVITLVKDT 167

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L   +G A+L  V  T   +    + +  I    Y  ++ +++   +    K+ 
Sbjct: 168 ALVQVLGVAELFHVAQTQSGRLVSVMPLF-IAGVFYFIMNWVVSKAFDFTEKKLG 221


>gi|283457453|ref|YP_003362030.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283133445|dbj|BAI64210.1| ABC-type amino acid transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 267

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 15/194 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +  LY+  F       LV  A  Y +     +    N I           
Sbjct: 85  RISSIAPYRWIATLYVELFRGIPA-LLVFFAFGYGIPLAFKIRFVDNLIP---------- 133

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + ++L   +AA+I+E++R+GL A+P+GQMEAA +LG++H +A   +++PQA R ++PPLT
Sbjct: 134 VTLSLGMVSAAYISEVLRAGLQAIPKGQMEAARSLGMSHTRAMISIIIPQAFRVVLPPLT 193

Query: 329 SQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           ++ + L K+SSL   +G      +L   G   +      +  +++    YL +++ +   
Sbjct: 194 NEVILLTKDSSLVYLLGVTVSQYELAKFGREGLTAANAGLTPLVVAGLCYLIITVPLGQL 253

Query: 385 MNRLNAKIALKEKK 398
                 +  L  +K
Sbjct: 254 SAYFERRTQLAGRK 267



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 34/83 (40%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             I V   NT      G I     G L+   R+S+     WI  +YVE+FR IP L+V F
Sbjct: 54  DVITVALKNTLLYTTLGFIVGLSGGLLLALMRISSIAPYRWIATLYVELFRGIPALLVFF 113

Query: 147 FLYKSVLSVLPIPDHSIVLPFGM 169
                +     I     ++P  +
Sbjct: 114 AFGYGIPLAFKIRFVDNLIPVTL 136


>gi|83592632|ref|YP_426384.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575546|gb|ABC22097.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 218

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 14/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L F      +   I +   +LG V+      + R    +   A+  LY+S F    L  
Sbjct: 9   NLPFLLKGAGSTIAISLVGILLGQVIGALVC-VGRLSGNRLIDAIGALYVSFFRGVPLLI 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            +L+           V             P  M+   AL   + A+++EI R  L A+PR
Sbjct: 68  QLLLIYYMLPLIGIDV-------------PALMAAIGALGLASGAYVSEIYRGSLNAIPR 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA+ALG +     R +LLPQA R  +P L ++ + LLK SSL   +G A+L  V  
Sbjct: 115 GQGEAALALGFSGGSIWRRILLPQAFRLSVPALVNELILLLKASSLISVIGVAELTRVSQ 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T+   T +A+EI +    IY  ++  +A+    +   + L+ +
Sbjct: 175 TVSASTYRALEIYMAAGVIYFLINGCLAILGALVERHLRLQGR 217



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 40/81 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  +T  ++  G++   +IG LV  GRLS N+L+  I  +YV  FR +P L+ +  +
Sbjct: 13  LLKGAGSTIAISLVGILLGQVIGALVCVGRLSGNRLIDAIGALYVSFFRGVPLLIQLLLI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y  +  +       +     +
Sbjct: 73  YYMLPLIGIDVPALMAAIGAL 93


>gi|326332071|ref|ZP_08198356.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
 gi|325950209|gb|EGD42264.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
          Length = 299

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 6/196 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-----DKPVLGQFNFIGGS 260
            L R        AL   YI  F    L  L++I     L F     + P           
Sbjct: 99  ALGRMSGNPLVNALSWFYIWFFRSLPLVVLLIIIFNASLFFPQIGINIPFGPSLVSYDVE 158

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +   F++  + LS   AAF AEI+R GL++V  GQ+EAA ALGL+  +  R V+LPQA+
Sbjct: 159 GLLVPFVAAVVGLSLNEAAFAAEIIRGGLLSVDHGQIEAANALGLSPWRRLRQVVLPQAL 218

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSI 379
           RSI+P   +Q + L+K SSL   V   DL  +   + +      + ++L+    YL ++ 
Sbjct: 219 RSIVPGYVNQLIGLVKASSLVYYVSLVDLFGIVYQLESTHVSDKVAVLLVGTAWYLLIAA 278

Query: 380 MIALFMNRLNAKIALK 395
           ++++  + +    +  
Sbjct: 279 VLSVLQHYVERHYSRG 294



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 47/116 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L   + T  +     +   + G ++  GR+S N LV  +   Y+  FR++P +V++
Sbjct: 70  LDVVLDALLVTLEVTAVSAVVGFVGGVVLALGRMSGNPLVNALSWFYIWFFRSLPLVVLL 129

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
             ++ + L    I  +    P  +  +  GL  P +       +   +F   I+  
Sbjct: 130 IIIFNASLFFPQIGINIPFGPSLVSYDVEGLLVPFVAAVVGLSLNEAAFAAEIIRG 185


>gi|288960751|ref|YP_003451091.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288913059|dbj|BAI74547.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 234

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                +    ++G+VL      L R    +  + L   YI   +I G P L+ + L Y  
Sbjct: 20  VTILCWGAGCLIGMVLGFILMLL-RQVPVRPLRWLIRAYIE--VIRGTPFLIQLFLLYSG 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +  +              +  + L  Y +A+ AEI R+G  AVP+GQ+EAA++LG
Sbjct: 77  GPSIGLRLE-----------ATTAGILGLGLYGSAYFAEIFRAGYQAVPKGQVEAALSLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+H    R V++P  + S IP + +    L K + +   +   +L+    T+  +T    
Sbjct: 126 LSHGAILRRVIVPAMLVSTIPAIVNMMAILTKETVVLSIITVPELMYEMQTMAAETFATF 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E IL     Y  L  +++    RL A++  
Sbjct: 186 ETILGMALFYWLLVEVVSRLGRRLEARVTR 215



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y  A+L GF  T     +G +   ++G ++   R    + + W+ R Y+EV R  P L+
Sbjct: 9   QYGPALLRGFGVTILCWGAGCLIGMVLGFILMLLRQVPVRPLRWLIRAYIEVIRGTPFLI 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +F LY    S+    + +     G+ L               A
Sbjct: 69  QLFLLYSGGPSIGLRLEATTAGILGLGLYGSAYFAEIFRAGYQA 112


>gi|91789745|ref|YP_550697.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698970|gb|ABE45799.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 240

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 10/237 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +     V           L +          +   S+V+ IV+      L    +     
Sbjct: 1   MTWDWQVFLNDDGSGRTYLQWMMDAWGWTLSVAGCSWVVAIVMGGIMGTLRTLPNSPWLV 60

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            L  +++  F    +P LV I + Y   F  P +            P F+ +  AL  +T
Sbjct: 61  RLANVWVEVF--RNVPLLVQIFIWY---FVIPKM-----FPAMRDLPGFVLVVFALGFFT 110

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A IAE VR+G+ A+PRGQ  A +A+G T  +  R V+LP A+R IIPPLTS+ +NLLKN
Sbjct: 111 SARIAEQVRAGVQALPRGQRYAGMAMGFTTAQTYRYVILPMAIRIIIPPLTSESMNLLKN 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           SS+A AV  A+L         +T + +EI L    +Y   +  +   M  +  K+ +
Sbjct: 171 SSVAFAVSIAELTMFAMQAQEETSRGVEIYLAVTALYAVSAFTVNRIMAFIEKKVQI 227



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 1/91 (1%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNI 139
           S  +Y   ++  +  T  +A    + A ++G ++G  R   N   +  +  V+VEVFRN+
Sbjct: 14  SGRTYLQWMMDAWGWTLSVAGCSWVVAIVMGGIMGTLRTLPNSPWLVRLANVWVEVFRNV 73

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           P LV IF  Y  +  + P           +F
Sbjct: 74  PLLVQIFIWYFVIPKMFPAMRDLPGFVLVVF 104


>gi|320159034|ref|YP_004191412.1| arginine ABC transporterpermease ArtM [Vibrio vulnificus MO6-24/O]
 gi|319934346|gb|ADV89209.1| arginine ABC transporter, permease protein ArtM [Vibrio vulnificus
           MO6-24/O]
          Length = 222

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T        +T            L  G P
Sbjct: 4   QHLWQLLEGLVTSLELTAVSLLVGCILSLLMTA---TLILRTPLLHWFSRGVITLFTGTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        +   +F+      P F    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLIYYGPGQFDAIRD-SFVWQWLSQPWF-CAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKFVTL-KVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKK 215



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G V +  L    ++   I+  L+ A  +    L+ W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLVTSLELTAVSLLVGCILSLLMTATLILRTPLLHWFSRGVITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I D  +            L+    T   + ++F  +F
Sbjct: 62  LVQIFLIYYGPGQFDAIRDSFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|282897628|ref|ZP_06305628.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9]
 gi|281197551|gb|EFA72447.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Raphidiopsis brookii D9]
          Length = 343

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 18/259 (6%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           ++ +    L+V        L+ +              +     +   LT+       V S
Sbjct: 99  QLLQKAYQLIVPLLAPIWFLTFIITIWLLGGGLGLQSVPTNLWNGLLLTLLMAFVSIVLS 158

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F LG++L+L      R+      +   +LYI          L LI + +      P+   
Sbjct: 159 FPLGVLLAL-----GRNSELPVIRWFSILYIELVR-----GLPLIGILFIAQVMLPL--- 205

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
             F+  +      +     L  ++AA++AE VR GL ++PRGQ EAA ALGL       L
Sbjct: 206 --FLPDNWRLDRLVRGVAGLVLFSAAYMAENVRGGLQSIPRGQFEAARALGLNTFLLLIL 263

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIW 370
           V+LPQA+R++IP +  Q++ L K++SL   VG  +L  +  +I+ Q    G+ +E+ +  
Sbjct: 264 VILPQALRAVIPTIVGQFIGLFKDTSLLSLVGLVELTGIARSILAQPQFLGRYMEVYIFI 323

Query: 371 MFIYLSLSIMIALFMNRLN 389
             IY      ++L    L 
Sbjct: 324 GVIYWVFCYSMSLIARELE 342



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 74/206 (35%), Gaps = 19/206 (9%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +AF  ++ +  +G L+  GR S   ++ W   +Y+E+ R +P + ++F  
Sbjct: 140 LWNGLLLTLLMAFVSIVLSFPLGVLLALGRNSELPVIRWFSILYIELVRGLPLIGILFIA 199

Query: 149 YKSVLSVLPIPDHSIVLPFGMF------------LNNRGLSFPTLTMDTNAKIFVFSFVL 196
              +   LP       L  G+                 GL          A+    +  L
Sbjct: 200 QVMLPLFLPDNWRLDRLVRGVAGLVLFSAAYMAENVRGGLQSIPRGQFEAARALGLNTFL 259

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            ++L +    L        G+ + L             L L+ L       + +L Q  F
Sbjct: 260 LLILVILPQALRAVIPTIVGQFIGL-------FKDTSLLSLVGLVELTGIARSILAQPQF 312

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIA 282
           +G       F+ +   + CY+ + IA
Sbjct: 313 LGRYMEVYIFIGVIYWVFCYSMSLIA 338


>gi|156976755|ref|YP_001447661.1| arginine transporter permease subunit ArtQ [Vibrio harveyi ATCC
           BAA-1116]
 gi|156528349|gb|ABU73434.1| hypothetical protein VIBHAR_05530 [Vibrio harveyi ATCC BAA-1116]
          Length = 229

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 7/212 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G++L++     S     +     P+    T +      LV++ + + 
Sbjct: 15  WMTVQLAFTSLLVGLILAVVFA--SGEMSRRVFVKWPMTAFVTIVRGLPEILVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  +ALS   A++ ++ +R  L AV RGQ EAA AL
Sbjct: 73  -----STQVLFLITGDFIEVSPFLSGVVALSLIFASYASQTLRGALKAVGRGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GISQAHAFVRIVLPQAIRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    IYL ++++    +  ++ K +++
Sbjct: 188 FTWYATAAAIYLGITLITQRAVKLIDKKFSIQ 219


>gi|116629029|ref|YP_814201.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri ATCC 33323]
 gi|300362321|ref|ZP_07058497.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|116094611|gb|ABJ59763.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus gasseri ATCC 33323]
 gi|300353312|gb|EFJ69184.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 217

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 15/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L           +IF ++ V+ I L L       H + K  KA+   Y+  ++I 
Sbjct: 7   YIFSILPSLFSGAWLTIEIFFWTTVVSIPLGLLV-AFGLHSNLKLVKAILKFYV--WIIR 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   +                   V P + +  +A     AA+ AEI R GL 
Sbjct: 64  GTPLLLQLIFIFY-----------GLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQ 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ EAA  LGL+  +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+
Sbjct: 113 AVPVGQFEAAQVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLL 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G     +    +  +++   +YL+++ ++   +  +  K
Sbjct: 173 RAGNVATARDVSLVP-LVLVGCVYLAMTAVLTALLRVVEKK 212



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   ++  G   T  + F   + +  +G LV  G  S  KLV  I + YV + R  P L+
Sbjct: 10  SILPSLFSGAWLTIEIFFWTTVVSIPLGLLVAFGLHSNLKLVKAILKFYVWIIRGTPLLL 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            + F++  + +V  +            +N              A   
Sbjct: 70  QLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPV 116


>gi|15890450|ref|NP_356122.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158680|gb|AAK88907.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 216

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 13/195 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L+R       +   + +I+ F   G P L+ + + Y                    
Sbjct: 35  LCVALARVADSPAIQRASMAFIAVF--QGTPLLMQLFVVYY-----------GVALAGLN 81

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              ++++ IA + + +AF+ EI R G+ AVP+GQ EAA ALGL +    + V+LPQA + 
Sbjct: 82  VDAWIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTEAANALGLHYVSRMKDVVLPQAFKI 141

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P      + L+K +SLA  VGF +L   G  + NQT + + +  I   IY  +   ++
Sbjct: 142 SLPATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSNQTFRPLTVFAIVGIIYFLICWPLS 201

Query: 383 LFMNRLNAKIALKEK 397
           L+   +  ++    +
Sbjct: 202 LWGAGVEKRLQAASR 216


>gi|71083758|ref|YP_266478.1| ABC transporter permease component [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062871|gb|AAZ21874.1| ABC transporter permease component [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 226

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 95/173 (54%), Gaps = 7/173 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L YI+   +  +  + L+ L   +++  P++   +F         F+S  IAL+   +AF
Sbjct: 56  LTYINIGYVEIVRAIPLLVLILWIYYGLPIMTGLSF-------SPFVSGIIALAISESAF 108

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI R+G+ ++ + Q EA  +LGLT  K  RLV+LPQA+++I+P L +Q++ +LK SSL
Sbjct: 109 QAEIFRAGINSIKKSQWEAGSSLGLTFYKRLRLVILPQAIKNILPALGNQFVYVLKMSSL 168

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +G  DL      ++  T + +EI    +  YL L ++++  + +   K+ 
Sbjct: 169 VSIIGIGDLTRKANELVVSTYRPLEIYTFLILEYLILILIVSFIVRKFEKKLK 221



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 41/81 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L G   T +++   +I + I+G +V    L+ NK + +I   YVE+ R IP LV
Sbjct: 15  TNLKFLLSGLTTTIYISVVSIIISAILGFIVAIPSLAKNKFLTYINIGYVEIVRAIPLLV 74

Query: 144 VIFFLYKSVLSVLPIPDHSIV 164
           +I ++Y  +  +  +     V
Sbjct: 75  LILWIYYGLPIMTGLSFSPFV 95


>gi|13474522|ref|NP_106091.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099]
 gi|14025276|dbj|BAB51877.1| ABC transporter permease protein [Mesorhizobium loti MAFF303099]
          Length = 224

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 15/233 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +    L            + + S  +GI + L    L R +  K  + L + Y  
Sbjct: 7   FFNPDVIMSSLPALLRGFLNTLLLGILSIGIGIPIGLLI-SLVRLYAPKPLRWLAVGYTD 65

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F    +  +VLI + Y L F    L              + S   A +   +A+ AE+ 
Sbjct: 66  IFRALPV-LVVLILIYYALPFLGIRL------------SSWASAVTAFAFIMSAYSAEVF 112

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ ++P+GQ EA+ ALGL      R V+LPQA+R +IPP+TS  +++ K++SLA  V 
Sbjct: 113 RSGIESIPKGQFEASQALGLPFLLTLRKVVLPQAIRVVIPPMTSNCVSMFKDTSLASTVA 172

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +L+       +        ++    +YL     +   ++ L  +   ++ +
Sbjct: 173 LPELLKEATNAQSLYANP-SPLIGAALVYLIFLWPMVRLVSLLEDRFKTEKAR 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 37/77 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L GF+NT  L    +     IG L+   RL A K + W+   Y ++FR +P LVV+  
Sbjct: 19  ALLRGFLNTLLLGILSIGIGIPIGLLISLVRLYAPKPLRWLAVGYTDIFRALPVLVVLIL 78

Query: 148 LYKSVLSVLPIPDHSIV 164
           +Y ++  +         
Sbjct: 79  IYYALPFLGIRLSSWAS 95


>gi|238791650|ref|ZP_04635288.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia intermedia ATCC 29909]
 gi|238729266|gb|EEQ20782.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia intermedia ATCC 29909]
          Length = 246

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+ + +      +     QF           F+S
Sbjct: 65  GTCYVELFRNVPLIVQFFTWYLVVPELLPVDIGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMLCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP
Sbjct: 53  LRTVPNRILSGIGTCYVELFRNVPLIVQFFTWYLVVPELLP 93


>gi|293395293|ref|ZP_06639578.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
 gi|291422250|gb|EFE95494.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Serratia odorifera DSM 4582]
          Length = 280

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 1/258 (0%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L   F L   + S+         +    F +   LS    T+       VF  +LG  L+
Sbjct: 5   LFAAFILLAIIQSIATNDRWEWGVFRQWFFDPVILSGLGKTLLLTLLGTVFGVMLGTALA 64

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FNFIGGS 260
           L     S   +      + L      L+  +       L   L    P     F      
Sbjct: 65  LARLSSSYLLNALAWGYIWLFRSLPLLLVLIVLYNFSYLYDNLSLGIPFTNIAFFSTPTV 124

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +  +F    I LS   +A+ AEI+R G++ V +GQ EAA ALGL   + T  ++LPQA+
Sbjct: 125 DLLDQFSVAVIGLSLVQSAYTAEIIRGGILGVEQGQHEAAAALGLPAYRRTFRIILPQAL 184

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++    YL ++ +
Sbjct: 185 RSILPTGFNEVISLAKGTSIVYVLSMPELFYTVQVIYNRTQQVIPLLMVATVWYLLITTV 244

Query: 381 IALFMNRLNAKIALKEKK 398
           +++  + +    A    +
Sbjct: 245 LSILQHYVERYFARGTVR 262


>gi|254229407|ref|ZP_04922823.1| ABC-type arginine transport system, permease component [Vibrio sp.
           Ex25]
 gi|262396867|ref|YP_003288720.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. Ex25]
 gi|269964163|ref|ZP_06178460.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269968081|ref|ZP_06182118.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|151938098|gb|EDN56940.1| ABC-type arginine transport system, permease component [Vibrio sp.
           Ex25]
 gi|262340461|gb|ACY54255.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. Ex25]
 gi|269827327|gb|EEZ81624.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269831118|gb|EEZ85280.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 229

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 7/212 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G++L++     S     +     P+    T +      LV++ + + 
Sbjct: 15  WMTVQLAFTSLLVGLILAVVFA--SGEMSRRVFVKWPMTAFVTIVRGLPEILVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  +ALS   A++ ++ +R  L AV RGQ EAA AL
Sbjct: 73  -----STQVLFLITGDFIEVSPFLSGVVALSLIFASYASQTLRGALKAVGRGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+         T +A
Sbjct: 128 GISQAHAFVRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAATHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    IYL ++++    +  ++ K +++
Sbjct: 188 FTWYATAAAIYLGITLITQRAVKLIDKKFSIQ 219


>gi|268318927|ref|YP_003292583.1| hypothetical protein FI9785_433 [Lactobacillus johnsonii FI9785]
 gi|262397302|emb|CAX66316.1| unnamed protein product [Lactobacillus johnsonii FI9785]
          Length = 214

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 19/228 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +L +   +     S   LT +      V S  LG++++          H K      +L 
Sbjct: 1   MLNYIFSIMPSLFSGAWLTTEIFFWTTVVSIPLGLLVAFG-------LHSKLKLVKAILK 53

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              ++I G P L+ +   +                   V P + +  +A     AA+ AE
Sbjct: 54  FYVWIIRGTPLLLQLIFIFY-----------GLPTVGIVFPRYEAALVAFIINYAAYFAE 102

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R GL AVP GQ EAA  LGL+  +    ++ PQ ++ ++P + ++ +NL+K+SSL   
Sbjct: 103 IFRGGLQAVPVGQFEAAQVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYV 162

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +G  DL+  G     +    +  +++   +YL+++ ++   +  +  +
Sbjct: 163 IGLGDLLRAGNVATARDVSLVP-LVLVGCVYLAMTAVLTALLRVVEKR 209



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   ++  G   T  + F   + +  +G LV  G  S  KLV  I + YV + R  P L+
Sbjct: 7   SIMPSLFSGAWLTTEIFFWTTVVSIPLGLLVAFGLHSKLKLVKAILKFYVWIIRGTPLLL 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            + F++  + +V  +            +N              A   
Sbjct: 67  QLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPV 113


>gi|227432438|ref|ZP_03914426.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351804|gb|EEJ42042.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 222

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 14/202 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
               F  ++G V       L       T + L   YI  +++ G P L+ +   Y     
Sbjct: 28  LGVFFLTIIGSVPLGILVSLGMKSPYFTIRWLINGYI--WIMRGTPLLLQLIFIYY---- 81

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                           P F +  IA     AA++AEI R GL +VPRGQ +AA  LG + 
Sbjct: 82  -------GLGMMGIAFPRFEAAIIAFIINYAAYLAEIFRGGLQSVPRGQYDAAKVLGFSK 134

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    ++LPQ ++ ++P   ++ +NL+K++SL   +G  D++  G    ++    +   
Sbjct: 135 IQTFFKIILPQVIKIVVPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRD-VTLMPY 193

Query: 368 LIWMFIYLSLSIMIALFMNRLN 389
           L+   IYL ++ ++ L + R  
Sbjct: 194 LLVGLIYLIMTAVVTLLLRRSE 215



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 36/90 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +  T++L G   T  + F  +I +  +G LV  G  S    + W+   Y+ + R  P L+
Sbjct: 15  TILTSLLAGLKTTLGVFFLTIIGSVPLGILVSLGMKSPYFTIRWLINGYIWIMRGTPLLL 74

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            + F+Y  +  +               +N 
Sbjct: 75  QLIFIYYGLGMMGIAFPRFEAAIIAFIINY 104


>gi|15599389|ref|NP_252883.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107103711|ref|ZP_01367629.1| hypothetical protein PaerPA_01004782 [Pseudomonas aeruginosa PACS2]
 gi|218889477|ref|YP_002438341.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|254237069|ref|ZP_04930392.1| hypothetical protein PACG_03106 [Pseudomonas aeruginosa C3719]
 gi|254242876|ref|ZP_04936198.1| hypothetical protein PA2G_03645 [Pseudomonas aeruginosa 2192]
 gi|9950404|gb|AAG07581.1|AE004835_10 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|126169000|gb|EAZ54511.1| hypothetical protein PACG_03106 [Pseudomonas aeruginosa C3719]
 gi|126196254|gb|EAZ60317.1| hypothetical protein PA2G_03645 [Pseudomonas aeruginosa 2192]
 gi|218769700|emb|CAW25460.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 232

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 70/220 (31%), Positives = 110/220 (50%), Gaps = 21/220 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLI 238
             A   VF+  L ++++L      R        + ++ + +PLL    F  F  P  +  
Sbjct: 28  LAAVTLVFAVPLAMLVALLRLAPFRALQWLGFAYVESIRNVPLLAHMLFWYFAAPEWLPE 87

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            LK  L+                 + E  S  +AL+ YTAAF++E +RSG+ AVP  Q+E
Sbjct: 88  DLKAWLYAG---------------NIEAASAIVALTLYTAAFMSEDMRSGIRAVPTVQLE 132

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALG  +  + RLV+LPQA+R  +PPL SQ LNL KN+S+A  +G A+L+   G + +
Sbjct: 133 AARALGFGYLASMRLVILPQALRITVPPLISQTLNLWKNTSIATVIGVAELMYQAGQVES 192

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            T ++ E        YLS+S++I         +    E++
Sbjct: 193 STFRSFESFAFATAAYLSVSLLITGAAAWYQQRYPGVERR 232



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   ++ G + +  LA   ++ A  +  LV   RL+  + + W+   YVE  RN+P 
Sbjct: 11  RGQYHEMLVAGLLLSLKLAAVTLVFAVPLAMLVALLRLAPFRALQWLGFAYVESIRNVPL 70

Query: 142 LVVIFFLYKSVLSVLPI 158
           L  + F Y +    LP 
Sbjct: 71  LAHMLFWYFAAPEWLPE 87


>gi|317048960|ref|YP_004116608.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950577|gb|ADU70052.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 228

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            ++  L    +T++      V + VLG++ +      SR           L    T LI 
Sbjct: 5   YSDVILKGTLVTLELALSSVVLAVVLGLIGAGAKLSRSRPLAM-------LFEGYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +                        ++  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIALNALTDALGVAQFDIDPMVAGIITLGFIYGAYFTETFRGAFL 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ+EAA A G T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 AVPKGQIEAATAFGFTGSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T Q     ++   IYL  + +    +  L  + ++  K+
Sbjct: 178 KATQLAGKSTWQPFYFAIVAGVIYLVFTTLSNGVLWWLERRYSVGVKR 225



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  IL G + T  LA S ++ A ++G +    +LS ++ +A +   Y  + R +P LV+
Sbjct: 5   YSDVILKGTLVTLELALSSVVLAVVLGLIGAGAKLSRSRPLAMLFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|220914744|ref|YP_002490052.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219952495|gb|ACL62885.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 394

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 13/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+F            +     +  F       LS+      R  +    + L  +Y+
Sbjct: 168 MWGGVFGLTYVPQDSWGGLPITLILATFGLACAFPLSILVALGRRATNLPAIRVLCTVYV 227

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L T++ +A      F    L             + +   +A+  + AA++AE+
Sbjct: 228 ELIRGVPLITVLFMASVMFPLFMPAGLN----------PDKLLRAQVAVILFAAAYLAEV 277

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL  +P+GQ EAA ALGL +   T  ++LPQA+R +IPPL + ++   K++SL + +
Sbjct: 278 VRGGLQTLPKGQYEAADALGLGYWHKTAFIILPQALRLVIPPLVNTFIGFFKDTSLVLII 337

Query: 345 GFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  DL++ G   +        + E+ L+   IY +   ++A +   L    +   K+
Sbjct: 338 GLFDLLTAGKVAMADLVWQPYSTEVYLVLAAIYFAFCYVMARYSRGLEQGFSRSTKR 394



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS-ANKLVAWICRVYVEV 135
           + Y    S+      G   T  LA  G+  A  +  LV  GR +     +  +C VYVE+
Sbjct: 175 LTYVPQDSWG-----GLPITLILATFGLACAFPLSILVALGRRATNLPAIRVLCTVYVEL 229

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            R +P + V+F         +P   +   L
Sbjct: 230 IRGVPLITVLFMASVMFPLFMPAGLNPDKL 259


>gi|238782938|ref|ZP_04626966.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia bercovieri ATCC 43970]
 gi|238716141|gb|EEQ08125.1| Inner membrane amino-acid ABC transporter permease protein yhdY
           [Yersinia bercovieri ATCC 43970]
          Length = 369

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 18/265 (6%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            +R +P       ++     +L              +  R     TLT+   A     + 
Sbjct: 117 FWRAMPRRGRYLAVWIVAYPLLVWVMLYGGFLGLSRVETRQWGGLTLTLIIAAVGIAGAL 176

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            LGI+L+L     +R       + L +++I  +    L T++ ++           +   
Sbjct: 177 PLGILLAL-----ARRSSMPVVRILSVVFIEFWRGVPLITVLFMS----------SVMLP 221

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +LGL + K   LV
Sbjct: 222 LFMTEGTSIDKLIRALVGVVLFQSAYVAEVVRGGLQALPKGQTEAAESLGLGYWKTQGLV 281

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWM 371
           +LPQA++ +IP L +  + L K++SL + +G  DL S            G + E  +   
Sbjct: 282 ILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAA 341

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            +Y      ++ +   L  +     
Sbjct: 342 TVYWIFCFSMSRYSQHLEKRFHTGR 366


>gi|323495725|ref|ZP_08100795.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326]
 gi|323319192|gb|EGA72133.1| amino acid ABC transporter permease [Vibrio sinaloensis DSM 21326]
          Length = 303

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/275 (22%), Positives = 117/275 (42%), Gaps = 14/275 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            I  +    +   S+                    +  L +    +    ++ V+  +L 
Sbjct: 29  VIALVATWLYYRSSIGVNYQWRWQEAFSLLVTPRADGSLPYFFQGLIATLRLSVWGMLLA 88

Query: 198 IVL--SLFATRLSRHFHEKTG---------KALPLLYISTFLIFGLPTLVLIALKYQL-- 244
             L  ++   R+SR    +              PL+++  F  F    L+ +     L  
Sbjct: 89  FTLGTAMGIARVSRFSFVRAPINAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLSDLLR 148

Query: 245 -HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            H  +    Q    G + +    +S  + +   ++A++AEIVRSGL  + +GQ EAA +L
Sbjct: 149 NHSGELNAAQSFLFGPAALWENLLSGVLCIGILSSAYVAEIVRSGLNNIEKGQWEAADSL 208

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+     R V+ PQ + +I P L  Q ++L+K++S+   +   ++  VG  I N +G  
Sbjct: 209 GLSLWVKYRYVIAPQVLATITPALAGQAISLVKDTSIVSLISIQEMTFVGTEIANSSGLI 268

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            EI LI    YL++ + ++LF  +L  +    ++K
Sbjct: 269 FEIWLIVGLTYLAVCLALSLFFRKLELRTLRHQRK 303



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 12/112 (10%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
            IL +++ ++  W          +S++ +   +  + A       ++             
Sbjct: 24  AILLIVIALVATWLYY-------RSSIGVNYQWRWQEA-----FSLLVTPRADGSLPYFF 71

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            G + T  L+  GM+ A  +GT +G  R+S    V      +V++ RNIPPL
Sbjct: 72  QGLIATLRLSVWGMLLAFTLGTAMGIARVSRFSFVRAPINAFVQLVRNIPPL 123


>gi|241204560|ref|YP_002975656.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858450|gb|ACS56117.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 224

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+  +    V   ++G  L +  T  SR      G  + L       I G
Sbjct: 13  YPLALRGLGMTVALSLISLVLGTLIGFCLGILRTGGSRLLSAAIGSWVDL-------IRG 65

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L +           F           F +  IAL+   A FI EIV +G+ A
Sbjct: 66  TPFLVQIFLIF-----------FILPEFGIELDAFSAGIIALTNLAACFICEIVAAGIRA 114

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ+EAA+A GL+  +  R V+LPQAMR ++PPL  QY+ L+K+SS+  A+G  DL  
Sbjct: 115 VPTGQIEAALASGLSRWQRMRQVVLPQAMRIVLPPLVGQYVLLIKDSSVVSAIGLTDLTR 174

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           VG  ++ +    + +  +    Y  +   + +   RL  ++ 
Sbjct: 175 VGWLVVQRVPNGLLVFFLVGVGYFIVCYPLIMLARRLELRMG 216



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+   ++  T+IG  +G  R   ++L++     +V++ R  P LV IF ++
Sbjct: 17  LRGLGMTVALSLISLVLGTLIGFCLGILRTGGSRLLSAAIGSWVDLIRGTPFLVQIFLIF 76

Query: 150 KSVLSVLPI 158
             +      
Sbjct: 77  FILPEFGIE 85


>gi|153216007|ref|ZP_01950229.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124114520|gb|EAY33340.1| amino acid ABC transporter, permease protein [Vibrio cholerae 1587]
          Length = 298

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALP-LLYIS 225
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L+++ 
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H  +         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLSLSMLFKQVEKR 291



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEI--------DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           ++            L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYQWHWREAWTLIFTPRADGNLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL----------SVLPI 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  +            +L  
Sbjct: 85  VLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRD 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +            L    L+      +   +++  IV +  A      +       
Sbjct: 145 HTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|311111176|ref|ZP_07712573.1| amino acid ABC transporter, permease protein [Lactobacillus gasseri
           MV-22]
 gi|311066330|gb|EFQ46670.1| amino acid ABC transporter, permease protein [Lactobacillus gasseri
           MV-22]
          Length = 217

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 15/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L           +IF ++ V+ I L L       H + K  KA+   Y+  ++I 
Sbjct: 7   YIFSILPSLFSGAWLTIEIFFWTTVVSIPLGLLV-AFGLHSNLKLVKAILKFYV--WIIR 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   +                   V P + +  +A     AA+ AEI R GL 
Sbjct: 64  GTPLLLQLIFIFY-----------GLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQ 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ EAA  LGL+  +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+
Sbjct: 113 AVPVGQFEAAQVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLL 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G     +    +  +++   +YL+++ ++   +  +  +
Sbjct: 173 RAGNVATARDVSLVP-LVLVGCVYLAMTAVLTALLRVVEKR 212



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   ++  G   T  + F   + +  +G LV  G  S  KLV  I + YV + R  P L+
Sbjct: 10  SILPSLFSGAWLTIEIFFWTTVVSIPLGLLVAFGLHSNLKLVKAILKFYVWIIRGTPLLL 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            + F++  + +V  +            +N              A   
Sbjct: 70  QLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPV 116


>gi|262403803|ref|ZP_06080361.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC586]
 gi|262350307|gb|EEY99442.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC586]
          Length = 222

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLLMT-VSLVMRTPIVHWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPTYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGVAGAFYLTVNGILTLIFRQIEKK 215



 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G   +  L  + ++   I+  L+    +    +V W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLGTSLQLTAASLLVGCILSLLMTVSLVMRTPIVHWFSRAVITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I +  + +          L+    T   + ++F  +F
Sbjct: 62  LVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|134295206|ref|YP_001118941.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138363|gb|ABO54106.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 237

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG V ++    ++R   ++       LY  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASISLGFVCAVPL-AVARVSKKRWVSTPVRLY--TYVFRGTPLYVQLLLMYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   + +  +     F    +A +  T A+  EI    + A+P G++EAA A G
Sbjct: 82  MYSLEFVRSHSLL-DAFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R V++P A+R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MSPFTMYRRVIVPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   IYL++S  +     R    
Sbjct: 201 QSFGLAALIYLAVSFALVAAFRRAERH 227



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 31/72 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  + V+   R+Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASISLGFVCAVPLAVARVSKKRWVSTPVRLYTYVFRGTPLYVQLLLMY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|330821515|ref|YP_004350377.1| amino-acid transmembrane ABC transporter protein [Burkholderia
           gladioli BSR3]
 gi|327373510|gb|AEA64865.1| amino-acid transmembrane ABC transporter protein [Burkholderia
           gladioli BSR3]
          Length = 223

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 13/220 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L        T     V +F +GIV+      L+R    +   A  L Y+S  LI G+P
Sbjct: 14  PFLHDVAAGAATTVIASVAAFAIGIVIGALLL-LARQHGGRVAAACVLAYVS--LIRGVP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ + + Y +    P L                +  +AL+  TAA+I+EI+R  L ++ 
Sbjct: 71  ALIQMLVAYYV---LPALLDITL-------SPLQAGILALALNTAAYISEILRGALHSLG 120

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+ AA ALG++  +  R ++ PQ     IPPLTS++  LLK SSL   +   DL +V 
Sbjct: 121 RGQIPAARALGMSPVQVWRHIVFPQLFLRSIPPLTSEFTMLLKASSLLSIIAVHDLATVA 180

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                QT Q +++      +Y ++  +++     L  +++
Sbjct: 181 RDATLQTNQPLQVFSAAAAVYFAILFLVSSASRGLERRLS 220


>gi|16262711|ref|NP_435504.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|307312873|ref|ZP_07592502.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|14523337|gb|AAK64916.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306899387|gb|EFN30020.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 227

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 13/227 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      +    ++ + S  +G ++++    L R             Y  T++  G P L
Sbjct: 10  IPRMLGGIVMTFQLLLLSLAIGTMIAVLLL-LMRISGRWWLSWPAQFY--TYVFRGTPIL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           V I + Y        L QF +I  S   P     F    +ALS  T A+++EI R G++A
Sbjct: 67  VQIFIVYY------GLPQFEWIRESIFWPILRDPFGCAILALSLNTGAYLSEIFRGGVLA 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RG +EA  ALG++       +  P A+R  +P   ++ ++L+K+++LA  +   D+  
Sbjct: 121 VERGLLEAGAALGMSATHRFIYITTPLAIRIALPAYGNEVISLMKSTALASTITLVDMTG 180

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G TI+ +T    ++ L    +Y++++ +I   + RL   +     +
Sbjct: 181 IGRTIVAETFAPYQVFLSLAIVYVAITWIIQRSVKRLEVYLGRSTAR 227



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 32/67 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V TF L    +   T+I  L+   R+S    ++W  + Y  VFR  P LV IF +
Sbjct: 13  MLGGIVMTFQLLLLSLAIGTMIAVLLLLMRISGRWWLSWPAQFYTYVFRGTPILVQIFIV 72

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 73  YYGLPQF 79


>gi|323967296|gb|EGB62719.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli M863]
 gi|327253648|gb|EGE65277.1| arginine transport system permease protein artM [Escherichia coli
           STEC_7v]
          Length = 222

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPGQFPTLQEYPVLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 YSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPVLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|13475816|ref|NP_107386.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026575|dbj|BAB53172.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 230

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 3/184 (1%)

Query: 217 KALPLLYISTFL--IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           + + +  I  F+    G P LV I L Y          Q   I      P +    +ALS
Sbjct: 47  RRIVIWPIRAFVAVFRGTPLLVQIFLIYYGLGQFRPSLQAIGIWWLFREP-YWCAIVALS 105

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ +EI+R  + AVPRG  EAA A G++     RL++LP A+R+ IP  T++ + +
Sbjct: 106 LNEAAYGSEILRGAIKAVPRGLTEAATASGMSKLLTLRLIVLPLALRNAIPNYTNEIILM 165

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +K +SLA  +   ++  +   +I+QT +A+E+ +    IYL+L+  I   +N L  ++  
Sbjct: 166 VKGTSLASIITLMEITGIAQGLISQTYRAVEVFVAAGAIYLTLNFAIISALNALETRLTP 225

Query: 395 KEKK 398
              +
Sbjct: 226 YRVR 229


>gi|289624565|ref|ZP_06457519.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|330866227|gb|EGH00936.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. aesculi str. 0893_23]
          Length = 232

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYSVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|238759570|ref|ZP_04620732.1| ABC-type amino acid transport system permease component [Yersinia
           aldovae ATCC 35236]
 gi|238702229|gb|EEP94784.1| ABC-type amino acid transport system permease component [Yersinia
           aldovae ATCC 35236]
          Length = 251

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 107/227 (47%), Gaps = 11/227 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   + S + G+  ++  T L        G    +L       
Sbjct: 10  WTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTALGVALAMSRGVWAGVLAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPMVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           IA+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 IAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   + N++    +E+ L    +Y  L + + L  N LN + + K
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLDLLANGLNRRFSPK 226


>gi|171321020|ref|ZP_02910007.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171093717|gb|EDT38861.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 246

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 4/241 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P           +         ++ + ++V+ +++      L R    K
Sbjct: 2   SYHWNWGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVL-RTVPNK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              A+  +Y+S F    +P +V   + Y  +    P             +  F +  + L
Sbjct: 61  WLSAIGTVYVSIF--RNIPLIVQFFVWYLVVPELLPASVGTWIKQLPPATQFFTASIVCL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T A + E VRSG+ A+P GQ  A +A+G T  +  R VLLP A R I+PPLTS++LN
Sbjct: 119 GLFTGARVCEQVRSGINALPTGQRAAGLAMGFTQWQTYRYVLLPVAYRIIVPPLTSEFLN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + KNS++A  +G  DL +    +++ T Q  E  +     Y+ +++++  FM  +  +  
Sbjct: 179 IFKNSAVASTIGLLDLSAQARQLVDYTAQTYESFIAVTLAYVVINLVVMSFMRWIEGRTR 238

Query: 394 L 394
           L
Sbjct: 239 L 239



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 46/95 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   ++ GF  T  ++    + A I+G+L G  R   NK ++ I 
Sbjct: 7   WGIFLSPVSTGEPTTYFGWLMSGFWVTIEVSLVAWVIALIVGSLFGVLRTVPNKWLSAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            VYV +FRNIP +V  F  Y  V  +LP    + +
Sbjct: 67  TVYVSIFRNIPLIVQFFVWYLVVPELLPASVGTWI 101


>gi|167847334|ref|ZP_02472842.1| thiamine monophosphate kinase [Burkholderia pseudomallei B7210]
          Length = 373

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 22/189 (11%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             LG+ L+L    L         +   ++ I  F       + ++ L +  +F  PVL  
Sbjct: 190 VALGVALALATGAL---------RGALVVVIGFFR-----AIPVLMLIFWTYFLLPVLLH 235

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            +        P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT  +  R 
Sbjct: 236 ADV-------PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQWQAGLSLGLTRWQTVRH 288

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMF 372
           VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+      +I L    
Sbjct: 289 VLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNRLMVYPAQIFLFVGV 348

Query: 373 IYLSLSIMI 381
           IYL L   +
Sbjct: 349 IYLILCTAL 357


>gi|311103231|ref|YP_003976084.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 1 [Achromobacter
           xylosoxidans A8]
 gi|310757920|gb|ADP13369.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 1
           [Achromobacter xylosoxidans A8]
          Length = 239

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 4/231 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    + +        +    +     I + ++ + +V+ L    L        G+   L
Sbjct: 3   NYAWNWNVLFEEPYAGWLISGLQATVLISLAAWAIAVVIGLALGVLG----SLPGRIRWL 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L +   +   +P LV + + + +  +        ++      PE  +   AL  +TAA +
Sbjct: 59  LTVYVSVFRNVPLLVQLFIWFFVVPELLPGEVGRWLKRDLPMPEIWTAIAALGLFTAARV 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           A  VRSG+ A+ RGQ  AA A G+T  +A R +LLPQA+R ++PP+TS++L + KNS+LA
Sbjct: 119 AVQVRSGIAALSRGQRLAAYASGMTLAQAYRYILLPQALRLVLPPMTSEFLTVFKNSALA 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +G  ++ +    I + T    E       +YLS+++ +   M  L  K+
Sbjct: 179 LTIGVFEMTAQSRQIESYTFSGFEAFTAATLVYLSIALCVTAGMRSLEKKL 229



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 1/93 (1%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  YA  ++ G   T  ++ +    A +IG  +G    S    + W+  VYV VFRN+P 
Sbjct: 13  EEPYAGWLISGLQATVLISLAAWAIAVVIGLALGVL-GSLPGRIRWLLTVYVSVFRNVPL 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           LV +F  +  V  +LP      +          
Sbjct: 72  LVQLFIWFFVVPELLPGEVGRWLKRDLPMPEIW 104


>gi|302189024|ref|ZP_07265697.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. syringae 642]
          Length = 232

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKIAERR 222


>gi|295096442|emb|CBK85532.1| L-arginine ABC transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 222

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S ++ ++L+L  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELMKGLHTSLTLTVASIIVALILALIFTIV---LTLKTPVLVWIVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  I      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSLQEYPVIWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      +YL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGLVYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 40/114 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ WI R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASIIVALILALIFTIVLTLKTPVLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPSLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|238920410|ref|YP_002933925.1| arginine transporter permease subunit ArtQ [Edwardsiella ictaluri
           93-146]
 gi|238869979|gb|ACR69690.1| polar amino acid ABC transporter, inner membrane subunit
           [Edwardsiella ictaluri 93-146]
          Length = 238

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 2/210 (0%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG-LPTLVLIALKYQLHFD 247
           +F   F +   +      L         + LP + +  F+ FG    L+ ++    L+  
Sbjct: 27  VFAMLFAVWESVRCRPMALLGTAWVTLLRGLPEILVVLFIYFGSAQMLLWLSDGIGLNLG 86

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              L     I    VSP F+   +AL+   AA+ ++ +R  L AVP+GQ EA +ALGL++
Sbjct: 87  FTTLRLQLNIENFEVSP-FLCGVLALALLYAAYGSQTLRGALKAVPQGQREAGMALGLSN 145

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I  +T +     
Sbjct: 146 SQIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWY 205

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I   IYL +++     + R+  +    E+
Sbjct: 206 CIAAAIYLVITLFSQYVLKRIELRTTRFER 235


>gi|160896812|ref|YP_001562394.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160362396|gb|ABX34009.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 250

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 69/225 (30%), Positives = 104/225 (46%), Gaps = 10/225 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   +   L +          + + S V+ +V+      L           L   ++  
Sbjct: 22  FGKNGDITYLDWMLSAWGWTISVSLLSLVIALVVGSLIGTLRTLEGRPWIVRLGNAWVEL 81

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV I + Y            +F+      P F+ + +AL  +T+A IAE VR
Sbjct: 82  F--RNIPLLVHIFMWY--------HVVPSFVPALKSLPGFVLVVLALGFFTSARIAEQVR 131

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ A+PRGQ  A +A+G T  +  R VLLP A R IIPPLTS+ +N+ KNSS+A AV  
Sbjct: 132 SGIQALPRGQRYAGMAMGFTTFQYYRYVLLPMAFRIIIPPLTSETMNVFKNSSVAFAVSV 191

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A+L         +T + IEI L    +Y+  +  I   M  +  +
Sbjct: 192 AELTMFAMQAQEETSRGIEIYLAVTGLYVVSAFAINRIMAFIEKR 236



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWIC 129
           E+ Q       D +Y   +L  +  T  ++   ++ A ++G+L+G  R L     +  + 
Sbjct: 16  EVGQSCFGKNGDITYLDWMLSAWGWTISVSLLSLVIALVVGSLIGTLRTLEGRPWIVRLG 75

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
             +VE+FRNIP LV IF  Y  V S +P
Sbjct: 76  NAWVELFRNIPLLVHIFMWYHVVPSFVP 103


>gi|82543096|ref|YP_407043.1| glutamate-aspartate transport system permease [Shigella boydii
           Sb227]
 gi|81244507|gb|ABB65215.1| glutamate-aspartate transport system permease [Shigella boydii
           Sb227]
 gi|320185368|gb|EFW60138.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella flexneri CDC 796-83]
 gi|332097727|gb|EGJ02701.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           boydii 3594-74]
          Length = 224

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNIFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV +FR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNIFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|70731861|ref|YP_261603.1| arginine/ornithine transport system permease aotM [Pseudomonas
           fluorescens Pf-5]
 gi|68346160|gb|AAY93766.1| arginine/ornithine transport system permease protein aotM
           [Pseudomonas fluorescens Pf-5]
          Length = 232

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +      L F  L            F L + L L   R+S+             
Sbjct: 1   MIFDYNVIYEALPLYFGGLLTTLKLLALSLFFGLLVALPLGLMRVSKQPLVNM-----TA 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKLAEGR 222


>gi|317404418|gb|EFV84835.1| amino acid ABC transporter permease [Achromobacter xylosoxidans
           C54]
          Length = 367

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 19/281 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPT 180
             L+A I  V V V   I             + +  +         G+ ++ N       
Sbjct: 102 RPLIATIILVAVIVCSGIRRFWNWKLAIIWTVGLTAVAILMWGGVLGLTYVENARWGGLP 161

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +     F+F +G++L+L      R       KAL ++YI       L +L+ ++ 
Sbjct: 162 LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIELIRGVPLISLLFMS- 215

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+       + +   IA+  + AA+IAE VR GL A+P+GQ E A
Sbjct: 216 ---------SVMLPLFLPEGFSIDKLLRAQIAIIMFAAAYIAETVRGGLQAIPKGQYEGA 266

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV---SVGGTII 357
            +LGL + +  R ++LPQA++ +IPPL S ++ L K++SL V +G  DL        +  
Sbjct: 267 DSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDLTLAAKAALSDA 326

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  +E  L    IY      ++ +   L  ++A    +
Sbjct: 327 AWRGFGVEAYLFISLIYFVFCFSMSKYSQALEKRLATGHAR 367


>gi|302388440|ref|YP_003824262.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302199068|gb|ADL06639.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 216

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 11/217 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      M  + +IFV + V  + L L      R       +A+   YIS  ++ G P +
Sbjct: 7   LLQLAGGMWVSIQIFVVTLVFSLPLGLLV-SFGRMSKNPVVQAIVKFYIS--VMRGTPLM 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + + + Y   ++   +   N            + +I      AA+ AEI RSG+ ++P G
Sbjct: 64  LQLMVVYFGPYNLFGMKVGNGYR-------LWAAFIGFVFNYAAYFAEIYRSGIQSMPVG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  LG +  +    ++ PQ ++ I+P +T++ + L+K++SLA  +   ++ +V   
Sbjct: 117 QYEAAKLLGYSKTQTFFRIIFPQVVKRILPSVTNEVITLVKDTSLAFTISVLEMFAVAKA 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + + +  ++   +     Y   ++++A+ M  +  ++
Sbjct: 177 LAS-SQTSLIPFVAAGLFYYIFNLIVAVGMEYIEKRM 212



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 38/98 (38%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   +  +    ++ +  +G LV  GR+S N +V  I + Y+ V R  P ++ +  +Y  
Sbjct: 13  GMWVSIQIFVVTLVFSLPLGLLVSFGRMSKNPVVQAIVKFYISVMRGTPLMLQLMVVYFG 72

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             ++  +   +    +  F+               + I
Sbjct: 73  PYNLFGMKVGNGYRLWAAFIGFVFNYAAYFAEIYRSGI 110


>gi|307727080|ref|YP_003910293.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Burkholderia
           sp. CCGE1003]
 gi|307587605|gb|ADN61002.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. CCGE1003]
          Length = 219

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 96/219 (43%), Gaps = 9/219 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +   L +    +    +  V++ ++ +V  ++           +      +     F++ 
Sbjct: 3   SFFDLHYAEQILPALLRASVYTILITLVGFAIALVLGLVLAVLRRSHVKAVSRTVGFIVE 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            + +  L+   Y L +  PV                 +  + ++ + A + +E+ R+GL 
Sbjct: 63  FIRSTPLLIQVYVLFYVLPVY--------GITMSALTAGTVGIALHYACYTSEVYRAGLN 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V RGQ EAA AL L+  +    V+LPQA+R +IP L +  + + K++ +  A+   +L+
Sbjct: 115 GVARGQWEAACALSLSPWRTYSGVILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                I ++T + +E I +    +L +S+  A  + RL 
Sbjct: 175 QQAKNIGSETFRYLEPITLAGIFFLLISVSFAQLVRRLE 213


>gi|284048143|ref|YP_003398482.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
 gi|283952364|gb|ADB47167.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
          Length = 231

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 23/241 (9%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
                    +      +   ++T+++     + + VLGI+L L      R  H       
Sbjct: 5   FSEKAWAVVLAHKANFIQGFSVTVESAIGGILIATVLGILLGLMGVSSKRLPH------- 57

Query: 220 PLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            +  I    I   P ++ +  L Y L F    +G               +  ++L  Y  
Sbjct: 58  AINRIYVEAIQNTPLILQLCLLYYALSFSGHKIGI------------LAAGIVSLGLYHG 105

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++AE++R+G+ AVPRGQ EAA A G  + +    ++LPQ ++ I+PP  +Q  NL+KN+
Sbjct: 106 AYMAEVIRAGIEAVPRGQFEAADAQGFNYTQKMAYIILPQTVKIILPPTVNQIGNLIKNT 165

Query: 339 SLAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++   +G ADL+S            G      ++   ++ ++   ++    R  AK+  +
Sbjct: 166 AVLYIIGGADLISSTYNFVTGATTGGSYAPAYIVCGVLFFAICFPLSTLAGRWEAKLKAQ 225

Query: 396 E 396
           +
Sbjct: 226 D 226



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 37/64 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GF  T   A  G++ AT++G L+G   +S+ +L   I R+YVE  +N P ++ +  L
Sbjct: 20  FIQGFSVTVESAIGGILIATVLGILLGLMGVSSKRLPHAINRIYVEAIQNTPLILQLCLL 79

Query: 149 YKSV 152
           Y ++
Sbjct: 80  YYAL 83


>gi|270290755|ref|ZP_06196979.1| polar amino acid transport system permease [Pediococcus
           acidilactici 7_4]
 gi|270280815|gb|EFA26649.1| polar amino acid transport system permease [Pediococcus
           acidilactici 7_4]
          Length = 217

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    +FS+VLG +L L      R+     G           +I  +  L
Sbjct: 17  LKGLWITIEVSVISIIFSYVLGGILGLIRYLNVRYLSALVG----------VVIDVIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + + ++F  P LG    I          S  +AL+ + +A IAEI+R G++++ +G
Sbjct: 67  PLLLMFFFVYFGLPNLGIRLGI--------LPSSILALTVFESAMIAEIIRGGIVSIDKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A A GL++ +A R ++LPQA   +IP L SQ+++L+K++SLA  +   +++     
Sbjct: 119 QMEGARANGLSYWQAMRYIILPQAQVRMIPALVSQFISLIKDTSLATIIMLPEMMYHAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I  Q T   I + +    +Y  +   +++   +L  K+A
Sbjct: 179 IYGQNTNYIIPMFVALAGMYFVVCYTLSIISRKLEQKLA 217



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 38/70 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +I + ++G ++G  R    + ++ +  V ++V RN+P L++ FF+
Sbjct: 16  LLKGLWITIEVSVISIIFSYVLGGILGLIRYLNVRYLSALVGVVIDVIRNLPLLLMFFFV 75

Query: 149 YKSVLSVLPI 158
           Y  + ++   
Sbjct: 76  YFGLPNLGIR 85


>gi|283796771|ref|ZP_06345924.1| amino acid ABC transporter, permease protein [Clostridium sp.
           M62/1]
 gi|291075659|gb|EFE13023.1| amino acid ABC transporter, permease protein [Clostridium sp.
           M62/1]
 gi|295092614|emb|CBK78721.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Clostridium cf. saccharolyticum K10]
 gi|295115213|emb|CBL36060.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SM4/1]
          Length = 216

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      M T+ +IF  + +  + L L      R       + +   YIS  ++ G P
Sbjct: 5   QILKQLAGGMGTSIEIFAVTLIFSLPLGLLI-SFGRMSKNPVIRTIVKFYIS--IMRGTP 61

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ + + Y   +    +   N            + +I      AA+ AEI RSG+ ++P
Sbjct: 62  LMLQLMVVYFGPYYLLGIRVGNDYR-------LWAAFIGFVINYAAYFAEIYRSGIQSMP 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA  LG +  +    ++ PQ ++ I+P +T++ + L+K++SLA  +   ++ +V 
Sbjct: 115 AGQYEAAKMLGYSRTQTFFRIIFPQVIKRILPSITNEVITLVKDTSLAFTISVMEMFTVA 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + + +  ++   +     Y   ++++A+ M     ++
Sbjct: 175 KALAS-SQVSMIPFVAAGLFYYVFNLLVAVVMEHAEKRL 212



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 30/68 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                +  G   +  +    +I +  +G L+  GR+S N ++  I + Y+ + R  P ++
Sbjct: 5   QILKQLAGGMGTSIEIFAVTLIFSLPLGLLISFGRMSKNPVIRTIVKFYISIMRGTPLML 64

Query: 144 VIFFLYKS 151
            +  +Y  
Sbjct: 65  QLMVVYFG 72


>gi|260222062|emb|CBA31251.1| Octopine transport system permease protein occM [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 231

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 11/174 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCY 276
           L+        G P LV + L Y        L QF ++  S         F   +IAL+  
Sbjct: 58  LVRFYGAAFRGTPLLVQMFLLYY------GLSQFEWVRASVAWVVLEDAFYCGFIALTLN 111

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA++AE +R+G++A+P GQ EAA A G+      R ++LPQA+R   P L ++ ++LLK
Sbjct: 112 IAAYMAEDIRAGILAIPVGQTEAARAFGMPSGTLLRRIVLPQALRIATPALGNEVVSLLK 171

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L   +   DL  V   + N++    + +++   +Y  L+++I+  ++ L  
Sbjct: 172 ATALVSTITVFDLTGVARRLSNESY-TTDALVLAGVVYGVLTLLISAGVHFLER 224


>gi|254506010|ref|ZP_05118155.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
 gi|219551233|gb|EED28213.1| amino acid ABC transporter, permease protein [Vibrio
           parahaemolyticus 16]
          Length = 303

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 14/280 (5%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V +   +  LV   +   S+                   ++  L +    +    ++ ++
Sbjct: 24  VTLLFGLALLVGWLYYRSSIGVNYHWRWQQAFDLIFTARSDGSLPYFFQGLVATLRLSIW 83

Query: 193 SFVLGIVLS--LFATRLSR--------HFHEKTGKALPLLYISTFLIFGL--PTLVLIAL 240
             VL   L   L   R SR        +   +  + +P L       F +    + L+ L
Sbjct: 84  GGVLAFTLGTLLGIGRQSRFTLIRQPINIFIQLVRNIPPLVFVFIFYFFISNQLIPLLGL 143

Query: 241 KYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              L  H       Q    G + +    +S  + +   ++A++AEIVRSGL +V +GQ E
Sbjct: 144 GEILRNHSGDITSLQSLLFGPAALWENLLSGVLCIGILSSAYVAEIVRSGLASVEKGQWE 203

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +L L+     R V+ PQ + +I P L  Q ++L+K++S+   +   ++  VG  + N
Sbjct: 204 AADSLSLSTWVKYRYVIAPQVLVTITPALAGQAISLIKDTSIVSLISIQEMTFVGTEMAN 263

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G   EI LI    YL++ + +++   +L + I   ++K
Sbjct: 264 SSGLIFEIWLIVGLTYLTICLALSMLFKKLESHILRHQRK 303



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 8/95 (8%)

Query: 56  NLSLGIGFLSERAGFEIDQG--------IVPYTSDSSYATAILVGFVNTFWLAFSGMIPA 107
            L+L +G+L  R+   ++          ++              G V T  L+  G + A
Sbjct: 29  GLALLVGWLYYRSSIGVNYHWRWQQAFDLIFTARSDGSLPYFFQGLVATLRLSIWGGVLA 88

Query: 108 TIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +GTL+G GR S   L+     +++++ RNIPPL
Sbjct: 89  FTLGTLLGIGRQSRFTLIRQPINIFIQLVRNIPPL 123


>gi|197336799|ref|YP_002157984.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11]
 gi|197314051|gb|ACH63500.1| amino acid ABC transporter permease protein [Vibrio fischeri MJ11]
          Length = 286

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYIS 225
                    T+       +F+   G++L L           LS  + +      PL++I 
Sbjct: 58  PYFFDGLFSTLRLTFWGMLFAICFGVLLGLGRSSNLTVIRALSNSYIQLIRNIPPLVFIF 117

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    LV +     L   H     L Q    G + +     +  + +   +AA+I 
Sbjct: 118 IFYFFIANQLVPLLGLENLLREHSGDINLLQQFLFGSANLWENLTAGVLCIGMISAAYIG 177

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VRSGL A+P+GQ EAA  LGL+     R ++ PQ  + IIPPL  Q ++L+K+SS+  
Sbjct: 178 EVVRSGLDAIPKGQHEAAKTLGLSTWHRYRYIIAPQVFKVIIPPLAGQCISLVKDSSIIS 237

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  + N +G   EI ++  F Y  L  M++   N    K
Sbjct: 238 LISIQELTFVGTEMANSSGMIFEIWIVVAFCYFILCFMLSQLFNYWERK 286



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
               G  +T  L F GM+ A   G L+G GR S   ++  +   Y+++ RNIPPLV
Sbjct: 59  YFFDGLFSTLRLTFWGMLFAICFGVLLGLGRSSNLTVIRALSNSYIQLIRNIPPLV 114


>gi|288962581|ref|YP_003452876.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288914847|dbj|BAI76332.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 216

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 14/227 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     LS   L       + + +FV    L+     ++R       +    L+I  F  
Sbjct: 4   FTLWDILSNLLLAARWTVLLSLIAFV-SGGLAGLLLLVARVSPLPPLRIAARLFIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + + +   F  P++           +  + S  + L+ +TAA++AEI R  +
Sbjct: 61  QGTPLLMQLFIVF---FALPLV--------GIETSAWTSAAVGLTLFTAAYLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP+GQ EA+ +L LT  +  R V+LPQA+R  +PP     + ++K +++   +GF ++
Sbjct: 110 EAVPKGQWEASASLALTFGEQMRHVILPQALRIAVPPTVGFSVQVVKGTAVTSIIGFVEV 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G  I N T Q   +  +   IY +L   ++L    L  K+ +  
Sbjct: 170 TKAGTMITNATFQPFLVYGLVGLIYFALCYPLSLSAKALERKLNVAR 216



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 38/105 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
               + +L+    T  L+    +   + G L+   R+S    +    R+++E+F+  P L
Sbjct: 7   WDILSNLLLAARWTVLLSLIAFVSGGLAGLLLLVARVSPLPPLRIAARLFIELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F ++ ++  V            G+ L               A
Sbjct: 67  MQLFIVFFALPLVGIETSAWTSAAVGLTLFTAAYLAEIWRGCVEA 111


>gi|284033027|ref|YP_003382958.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283812320|gb|ADB34159.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 249

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 20/216 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   VLG+V+++           +  +    +Y   F   GLP ++ I L    
Sbjct: 35  LAAASVVLGTVLGMVVAVMG-----LSRRRWLRWPAKIYTDIF--RGLPAILTILLI--- 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              + +        G    P      +ALS   AA+I EI RSG+ +V +GQ+EAA ALG
Sbjct: 85  --GQGLSPITRHWWGPNPYPL---GILALSLIAAAYIGEIFRSGIQSVEKGQLEAARALG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQT 360
             +    RLV++PQ +R ++P L +Q++ L+K SSL   +G      +L  +G       
Sbjct: 140 FGYSAGMRLVVIPQGVRRVLPALVNQFIALVKESSLVYFLGLLASQRELFRIGQDAAATN 199

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  +  +L+    YL +++ +   +N  + ++    
Sbjct: 200 GN-LSPLLLAGIFYLIITVPLTHLVNWFDKRLREGR 234



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 12/152 (7%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG VNT  LA + ++  T++G +V    LS  + + W  ++Y ++FR +P ++ I  + +
Sbjct: 27  VGLVNTLILAAASVVLGTVLGMVVAVMGLSRRRWLRWPAKIYTDIFRGLPAILTILLIGQ 86

Query: 151 SVLSVLPIPDHSIVLPFGMF------------LNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            +  +          P G+             +   G+          A+   F +  G+
Sbjct: 87  GLSPITRHWWGPNPYPLGILALSLIAAAYIGEIFRSGIQSVEKGQLEAARALGFGYSAGM 146

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            L +    + R       + + L+  S+ + F
Sbjct: 147 RLVVIPQGVRRVLPALVNQFIALVKESSLVYF 178


>gi|213859807|ref|ZP_03385511.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 180

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 1/166 (0%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +  G P  V + + Y   +   ++   + +  +          +AL+  T A+  EI 
Sbjct: 8   YVIFRGTPLYVQLLVFYSGMYTLEIVKGTDLL-NAFFRSGLNCTVLALTLNTCAYTTEIF 66

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
              + +VP G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA    
Sbjct: 67  AGAIRSVPHGEIEAARAYGFSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTAT 126

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             DL+ +   I + T Q      I   +YL +S ++     R   +
Sbjct: 127 VPDLLKIARDINSATYQPFTAFGIAAVLYLLISYVLISLFRRAERR 172


>gi|91789329|ref|YP_550281.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698554|gb|ABE45383.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 216

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 16/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +      +                +  F     + L L   RLS+     T     L+  
Sbjct: 1   MVEFSVWDIFRNLLLAARWTVVLSLIAFVGGGIVGLLLLVARLSKLRGMNT-----LVGG 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L  G P L+ + L Y           F        +  +++  +AL+ YT+AF+ EI
Sbjct: 56  YVQLFQGTPLLMQLFLAY-----------FGLALFGIKTSAWVAASVALTLYTSAFLTEI 104

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  + A+P+GQ EA  +L L+ R+  + V++PQA++  IPP     + ++K ++LA  +
Sbjct: 105 WRGCVAAIPKGQWEAGQSLALSFRELLQHVVVPQALKIAIPPTVGFLVQVVKGTALASVI 164

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           GF +L   G  I N T +   +      +Y +L   ++L+  RL  K+    
Sbjct: 165 GFIELTKAGTMITNATFKPFVVYSCVALLYFALCFPVSLYARRLERKLRNGR 216


>gi|330430557|gb|AEC21891.1| polar amino acid ABC transporter inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 237

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 4/221 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L + T    T   + V ++VL + +  F   L R       +A+   Y+S F    +P 
Sbjct: 14  YLGWITNGFVTTFALTVCAWVLALAVGTFFGIL-RTLPSTAARAVGTTYVSIF--RNIPL 70

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL-YIALSCYTAAFIAEIVRSGLIAVP 293
           +V   + Y +  +       ++I   T + +F  +   AL  YT + I E +R+G+ A+P
Sbjct: 71  IVQFFIWYFVVPEILPTPVGDWIKNITPNLQFFVVSVFALGIYTGSRICEQLRAGIQALP 130

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  A +A+G +  +  R ++LPQ  R I+PPLTS++L + KNS++A  +G  +L    
Sbjct: 131 RGQRNAGLAMGFSLFQTYRHIILPQVFRHILPPLTSEFLIISKNSAVASTIGLLELSGQA 190

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +++ T Q  E  +I    Y+ ++ +I  FM  +  + +L
Sbjct: 191 RQLVDYTAQPYESFIIVTLAYVFMNFLILRFMGWIRKRSSL 231



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 37/82 (45%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+Y   I  GFV TF L     + A  +GT  G  R   +     +   YV +FRNIP +
Sbjct: 12  STYLGWITNGFVTTFALTVCAWVLALAVGTFFGILRTLPSTAARAVGTTYVSIFRNIPLI 71

Query: 143 VVIFFLYKSVLSVLPIPDHSIV 164
           V  F  Y  V  +LP P    +
Sbjct: 72  VQFFIWYFVVPEILPTPVGDWI 93


>gi|229590086|ref|YP_002872205.1| glutamine high-affinity transport system; membrane component
           [Pseudomonas fluorescens SBW25]
 gi|229361952|emb|CAY48852.1| glutamine high-affinity transport system; membrane component
           [Pseudomonas fluorescens SBW25]
          Length = 220

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +    ++ + S  +G V+ L     +     K  + L  +Y++  +I   
Sbjct: 11  WRDFPSLLAGLGLGLELALLSIAIGCVIGLM-MAFAMLSRHKALRVLASVYVT--VIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y           F          +  S  I LS Y  A++ E+ R+GL+ +
Sbjct: 68  PILVLILLIY-----------FALPSLGIRLDKIPSFIITLSLYAGAYLTEVFRAGLLNI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G  EA +A+GL   +    + +P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 PKGLREAGLAIGLGEWRIRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y++   +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRLAIRR 220



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            +    +IG ++    LS +K +  +  VYV V RN P LV+I  +Y ++ S+    D  
Sbjct: 31  SIAIGCVIGLMMAFAMLSRHKALRVLASVYVTVIRNTPILVLILLIYFALPSLGIRLDKI 90

Query: 163 IVLPFGMFLN 172
                 + L 
Sbjct: 91  PSFIITLSLY 100


>gi|121593038|ref|YP_984934.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|222109806|ref|YP_002552070.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           ebreus TPSY]
 gi|120605118|gb|ABM40858.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Acidovorax sp. JS42]
 gi|221729250|gb|ACM32070.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax ebreus TPSY]
          Length = 223

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 17/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                     +N  +     ++       V   +LG VL+L      R   +K       
Sbjct: 6   DWSFFTWELFSNFVIKGLYFSLVLTVIATVGGILLGTVLALM-----RLSGKKWLDVPAT 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y++     G+ ++ L+ +        P++               +S  +    + AA+ 
Sbjct: 61  IYVN-----GMRSIPLVMVILWFFLLVPMIIGRPIGAE-------VSAVVTFIAFEAAYF 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ ++PRGQ+ A  ALG+T+ +  RLV+LPQA R+++P L +Q + L +++SL 
Sbjct: 109 SEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLV 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+G  D++          G+ IE  L    +Y  L   ++  + RL+ KIA+  
Sbjct: 169 YAIGAYDMLKGFEIAGKNYGRPIEAYLAAAVVYFILCYALSWLVKRLHKKIAIIR 223



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 2/155 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   +  L     +   ++GT++   RLS  K +     +YV   R+IP ++VI + +
Sbjct: 20  IKGLYFSLVLTVIATVGGILLGTVLALMRLSGKKWLDVPATIYVNGMRSIPLVMVILWFF 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             V  ++  P  + V     F+      F  +       I       G  L +   +  R
Sbjct: 80  LLVPMIIGRPIGAEVSAVVTFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMR 139

Query: 210 H--FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                +     LP+L   T ++F   +LV     Y
Sbjct: 140 LVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAY 174


>gi|50086542|ref|YP_048052.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           ADP1]
 gi|49532516|emb|CAG70230.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 221

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 14/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +    F     +      +  +  + +  F+LG +  L    L R   +   + + ++YI
Sbjct: 1   MMMQEFTLWDIIQNLLHGLGWSLLLSLMVFLLGGICGLLILML-RINPDPILQKVAIVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G P L+ + + +           F           + +   +L+ Y AA+ AEI
Sbjct: 60  EFF--QGTPLLIQLFMTF-----------FGLSLLGIDISPWTAAAFSLTAYAAAYFAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  + ++P GQ EAA +L +T  +  R V+LPQA+R  I P     + ++K +++   +
Sbjct: 107 WRGCVQSIPVGQWEAAASLAMTRLQQFRYVILPQAIRIAIAPTVGFSVQIVKATAVTSII 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           GF +L   G  + N T +   +  +    Y  L   ++     L  K+
Sbjct: 167 GFTELTKTGSVLANATFEPFLVFGLVAIGYFILCYPLSALAAYLEKKL 214



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 56/172 (32%), Gaps = 5/172 (2%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           I G L+   R++ + ++  +  VY+E F+  P L+ +F  +  +  +           F 
Sbjct: 35  ICGLLILMLRINPDPILQKVAIVYIEFFQGTPLLIQLFMTFFGLSLLGIDISPWTAAAFS 94

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +                 +             SL  TRL +  +    +A+ +    T  
Sbjct: 95  LTAYAAAYFAEIWRGCVQSIPV---GQWEAAASLAMTRLQQFRYVILPQAIRIAIAPT-- 149

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +     +V       +     +    + +  +T  P  +   +A+  +   +
Sbjct: 150 VGFSVQIVKATAVTSIIGFTELTKTGSVLANATFEPFLVFGLVAIGYFILCY 201


>gi|223933393|ref|ZP_03625380.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|302023343|ref|ZP_07248554.1| transport system membrane protein [Streptococcus suis 05HAS68]
 gi|330832144|ref|YP_004400969.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|223897960|gb|EEF64334.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|329306367|gb|AEB80783.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 223

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 14/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    F   +    +      +     + +  F LG     F     R       + L +
Sbjct: 4   NWQAVFNADIAREAIPQILEGLPYTLSLSLIGFALGTFCGFFV-AFMRMSKFGPLRWLAM 62

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +IS  L+ G+P +VL+   Y           F             +  IA +  ++A+I
Sbjct: 63  AHIS--LMRGIPLMVLLFFIY-----------FGLPFMGLQLDAISASIIAFTSMSSAYI 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+ L A+ +GQ EAA +LGL      R +++PQA R  +PPL++  L+++K++SL 
Sbjct: 110 SEIIRASLSAIDKGQWEAARSLGLRTNVIYRKIIIPQAFRIALPPLSNVLLDMVKSTSLT 169

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   ++ +    +       + + +    IY ++  + A    RL  ++A
Sbjct: 170 AMITVPEIFNKAKIVGGAKSDYMTVYICVALIYWAICTLYAFGQLRLEKRLA 221



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L+  G    T  G  V   R+S    + W+   ++ + R IP +V++FF+
Sbjct: 21  ILEGLPYTLSLSLIGFALGTFCGFFVAFMRMSKFGPLRWLAMAHISLMRGIPLMVLLFFI 80

Query: 149 YKSVL 153
           Y  + 
Sbjct: 81  YFGLP 85


>gi|317046630|ref|YP_004114278.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948247|gb|ADU67722.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 231

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 113/236 (47%), Gaps = 5/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F   +                ++ + ++++ +++++    + R   ++    L   
Sbjct: 1   MALDFSSVITGHFGQMIVDGTVVTLELALGAWLMAMIIAMLLVVI-RLTDQRIAVGLVKA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S      +PTL+ + + Y       +L +   +  + ++ EF+   +AL    AA+ +
Sbjct: 60  YVS--YHRNVPTLIQLMMWY--FAIPTLLPEALQMWINDLNAEFLFSLVALGLCQAAYFS 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSGL A+P GQ EAA ALG+ + +A   V+LPQ +R+ +P L +  + L KN+SLA+
Sbjct: 116 EDIRSGLRAIPDGQNEAARALGMGYVRAMWSVILPQGIRNALPALINHTVLLFKNTSLAM 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G A+L  V   I NQT +  E   +    YL  S+M+      L  +      +
Sbjct: 176 VIGVAELTYVTRDIENQTFRTFESYFVATVGYLFFSLMLMGLGALLARRFQRVYAR 231



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 38/80 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I+ G V T  LA    + A II  L+   RL+  ++   + + YV   RN+P L+ 
Sbjct: 13  FGQMIVDGTVVTLELALGAWLMAMIIAMLLVVIRLTDQRIAVGLVKAYVSYHRNVPTLIQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +   Y ++ ++LP      +
Sbjct: 73  LMMWYFAIPTLLPEALQMWI 92


>gi|238797859|ref|ZP_04641351.1| ABC-type amino acid transport system permease component [Yersinia
           mollaretii ATCC 43969]
 gi|238718275|gb|EEQ10099.1| ABC-type amino acid transport system permease component [Yersinia
           mollaretii ATCC 43969]
          Length = 254

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 107/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      ++P   +   A   + S + G+  ++  T L        G    +L       
Sbjct: 10  WSYLLWGTYPDGPLGGAALTVLISLMAGVASAILGTILGVALAMSRGVWAGILAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+  ++A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALISSAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 224


>gi|194017152|ref|ZP_03055764.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
 gi|194011020|gb|EDW20590.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus ATCC 7061]
          Length = 216

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 114/230 (49%), Gaps = 15/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L+F         K+   S +L  ++ L    L      +  +   L  I
Sbjct: 1   MDFLGAYQPDHLAFLLEGFAVTLKVAFISIILSFLIGLVIGTL------RFAQIPVLSKI 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++  +  L L+ + +  +F  P +G    I          S   AL+ + +A ++EI
Sbjct: 55  LAVVVETIRNLPLLLIIFFTYFALPEIGIKLSIT--------ASAIAALTVFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL ++ +GQ+EAA + GLT+ +  +++++PQA+R ++PP+ SQ+++LLK++SLAV +
Sbjct: 107 IRSGLKSIDKGQIEAARSSGLTYIQTLKMIIMPQALRRMVPPIVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +L+     +  Q+    + I L+   +Y  ++  ++L   RL  + A
Sbjct: 167 ALPELLHHAQILNGQSQSYLLPIFLLAAMMYFVVNFSLSLLARRLEYRQA 216



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 10/198 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L GF  T  +AF  +I + +IG ++G  R +   +++ I  V VE  RN+P L++
Sbjct: 11  HLAFLLEGFAVTLKVAFISIILSFLIGLVIGTLRFAQIPVLSKILAVVVETIRNLPLLLI 70

Query: 145 IFFLYKSVLSVLPI---------PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           IFF Y ++  +                        +   GL          A+    +++
Sbjct: 71  IFFTYFALPEIGIKLSITASAIAALTVFESAMLSEIIRSGLKSIDKGQIEAARSSGLTYI 130

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
             + + +    L R       + + LL   S  ++  LP L+  A          +L  F
Sbjct: 131 QTLKMIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELLHHAQILNGQSQSYLLPIF 190

Query: 255 NFIGGSTVSPEFMSLYIA 272
                      F    +A
Sbjct: 191 LLAAMMYFVVNFSLSLLA 208


>gi|170770016|ref|ZP_02904469.1| arginine ABC transporter, permease protein ArtM [Escherichia
           albertii TW07627]
 gi|170121082|gb|EDS90013.1| arginine ABC transporter, permease protein ArtM [Escherichia
           albertii TW07627]
          Length = 222

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A++  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCSALGMSKKDTLA-ILLPYALKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|82777623|ref|YP_403972.1| arginine transporter permease subunit ArtM [Shigella dysenteriae
           Sd197]
 gi|309785092|ref|ZP_07679725.1| arginine transport system permease protein artM [Shigella
           dysenteriae 1617]
 gi|81241771|gb|ABB62481.1| arginine 3rd transport system permease protein [Shigella
           dysenteriae Sd197]
 gi|308927462|gb|EFP72936.1| arginine transport system permease protein artM [Shigella
           dysenteriae 1617]
          Length = 222

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 YSQLLYGRTYDVM-VFGAAGIIYLIVNGLLTLMMRLIERKALTFERR 221



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|304407618|ref|ZP_07389270.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304343569|gb|EFM09411.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 236

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 3/234 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +    + L      + T   I   S V G+V+      L R        A  + Y+
Sbjct: 1   MKLDLSFIWQALLQLLTAVPTTIAITAVSIVCGLVIGTVV-ALIRINSVPVLNAAAVAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLG-QFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            TF+        L+ + + L F    +   F +   S   P     YIA S    A+++E
Sbjct: 60  -TFIRGTPMLTHLLLVYFGLPFVIDAICTNFGWSFRSVSIPMIGFAYIAFSITAGAYLSE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VRSGL+AV +GQ+EAA A+G+T  +A R ++ PQA   ++P L++  +++L  S+LA  
Sbjct: 119 VVRSGLLAVDKGQIEAAYAVGMTTTQAIRRIVFPQAFAILLPNLSNGTISMLHGSTLAFT 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V   D+ +    I +   +  E  +    IY  L+ +I         +I    +
Sbjct: 179 VSVVDINAKSQIIASSNWKFFESYIAAAVIYWGLTFLIERMTAMAEKRIQTYNR 232



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +    ++   +IGT+V   R+++  ++      YV   R  P L  +  +
Sbjct: 15  LLTAVPTTIAITAVSIVCGLVIGTVVALIRINSVPVLNAAAVAYVTFIRGTPMLTHLLLV 74

Query: 149 YKSVL 153
           Y  + 
Sbjct: 75  YFGLP 79


>gi|167033609|ref|YP_001668840.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860097|gb|ABY98504.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 219

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 1/205 (0%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +  L   + +F              AL  LY    +   +  +  + +   L     ++
Sbjct: 16  LATGLWWTVVMFLCSSVISVVVGVLFALIDLYAPRAMALPVRFVTWLLMGTPLLLQLYLI 75

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  G  + P   +  I LS + A + A++++SG+ AV  GQ+E A ++GL+     
Sbjct: 76  YYGLVQVGIDI-PALAAGIIGLSLHFAVYNADVIKSGIEAVDPGQIEGARSIGLSKAMTQ 134

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R +++PQA+R  I PL +  + LLK++SL   +G A+LV      +++T    E  +   
Sbjct: 135 RYIIVPQALRKTIAPLGNNLIVLLKDTSLVSIIGIAELVYSAQLAVSETYSPFEFYIAVA 194

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            IY   ++++   ++ + AK+ +  
Sbjct: 195 VIYYVANLVLEAGLHLIEAKVEMSR 219


>gi|327193431|gb|EGE60330.1| octopine ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 241

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 6/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+   +T+  +   F+   ++G V++     LSRH    T + L   Y +T L  
Sbjct: 18  WGWLLLTAAAMTIGVSVCGFLTGTLIGTVITFMQ--LSRHL---TIRWLADCY-TTVLRG 71

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV+    +        LG      G    P F++  +AL   +AA+ AE+ R    
Sbjct: 72  VPDLLVIYLFYFGGSALLGSLGGLFGYQGFIGMPAFLTGTLALGVVSAAYQAEVFRGAYR 131

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RG++EAA A+G+      R ++ P  +R  IP L + +  +LK S+L    G  +L+
Sbjct: 132 SVARGEIEAASAVGMRPWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALISVTGLVELL 191

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T +  E  L  + +YL ++ + ++   R+ A+     ++
Sbjct: 192 RQSQIAAGSTRRPFEFYLTAVVLYLVITWLSSILFRRMEARTIQGTRR 239



 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L     T  ++  G +  T+IGT++   +LS +  + W+   Y  V R +P L+V
Sbjct: 18  WGWLLLTAAAMTIGVSVCGFLTGTLIGTVITFMQLSRHLTIRWLADCYTTVLRGVPDLLV 77

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           I+  Y    ++L            +
Sbjct: 78  IYLFYFGGSALLGSLGGLFGYQGFI 102


>gi|304397039|ref|ZP_07378918.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355188|gb|EFM19556.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 222

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 3/188 (1%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              KT    PL+     L  G P LV I L Y      P + Q  ++      P ++   
Sbjct: 37  LSLKTPVFNPLVKGFITLFTGTPLLVQIFLIYYGPGQFPSIQQIPWLWHLLSQP-WLCAM 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +ALS  +AA+  ++    + A+P GQ ++  ALG+  +     +LLP A +  +   +++
Sbjct: 96  LALSLNSAAYTTQLFYGAVRAIPSGQWQSCAALGMGRKDTL-RILLPYAFKRALSSYSNE 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K +SLA  +   +++  G  +  +T   I +      IYL ++ ++ L M  +  
Sbjct: 155 VVLVFKGTSLAYTITLMEVMGHGQLLYGRTYD-ITVYAAAGLIYLCVNGLLTLMMRLIER 213

Query: 391 KIALKEKK 398
           +    E++
Sbjct: 214 RALAFERR 221


>gi|260464193|ref|ZP_05812386.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259029996|gb|EEW31279.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 269

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 6/247 (2%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P       +  ++     +   +  L   +F         T+ +   A     +  LGI 
Sbjct: 9   PDFPWWLAVAAALALAAALFIATSNLYAQVFATVAKGIGVTVFVTVVAFSLASAIGLGIA 68

Query: 200 L-SLFATRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L  L  +R  R    F+ +  + +P+L +  ++ F           +             
Sbjct: 69  LMGLSGSRWLRQIARFYVEIIRGVPILVLLFWIAFAGAPA--FVAAWNALTAPLQNAGLF 126

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                          +AL+   +AFI+E+ R+G+ AV +GQ+EAA ALGL+  +  RL++
Sbjct: 127 GELLVRDVSLLWRAVMALTIGYSAFISEVFRAGIQAVEKGQIEAAKALGLSRAQRFRLIV 186

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
            PQA+R+I+PPL + ++ L+K+SSL   +G AD+  +G      + +  E   I  +IYL
Sbjct: 187 FPQAIRTILPPLGNDFVALVKDSSLVSVLGVADITQMGKVYAAGSFRFFETYSITAYIYL 246

Query: 376 SLSIMIA 382
            L++ ++
Sbjct: 247 ILTVGLS 253



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
            A+ IG  +    LS ++ +  I R YVE+ R +P LV++F++  +         +
Sbjct: 59  LASAIGLGIALMGLSGSRWLRQIARFYVEIIRGVPILVLLFWIAFAGAPAFVAAWN 114


>gi|119896732|ref|YP_931945.1| putative glutamine transport permease [Azoarcus sp. BH72]
 gi|119669145|emb|CAL93058.1| putative glutamine transport permease protein [Azoarcus sp. BH72]
          Length = 245

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 9/240 (3%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                        G+   +  +S    T   +      + ++G VL +      R    K
Sbjct: 4   HWDWAFFFQETDDGLKYIDWVISGMGWTTAVSLSALAIALLVGSVLGVM-----RTTPSK 58

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
              A+   Y+  F    +P +V + + + +     ++ +   +      P F++  I L 
Sbjct: 59  LLVAIGDTYVDIF--RNVPLIVQLFMWFFV--VPELVPESIGLWMKQDLPYFVTAVIGLG 114

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            YTAA IAE V+SG+ A+ RGQ  A +ALG T  +  R V LP A R ++P LTS+ +N+
Sbjct: 115 LYTAARIAEQVKSGINALARGQRFAGLALGFTEWQTYRYVRLPMAYRIVLPALTSEAMNI 174

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            KNS++  AVG  +L      II +T Q +EI ++    Y  L+  +   +  +  +  +
Sbjct: 175 FKNSAVTYAVGILELYFQYKQIIEKTSQVLEITIVVTLTYFVLAFAMNRLLGFIEKRTRV 234



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 44/87 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   T  ++ S +  A ++G+++G  R + +KL+  I   YV++FRN+P +V 
Sbjct: 20  YIDWVISGMGWTTAVSLSALAIALLVGSVLGVMRTTPSKLLVAIGDTYVDIFRNVPLIVQ 79

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           +F  +  V  ++P      +     + 
Sbjct: 80  LFMWFFVVPELVPESIGLWMKQDLPYF 106


>gi|186477320|ref|YP_001858790.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193779|gb|ACC71744.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 246

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 8/219 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS   +T+  +   +V + ++G +  +      R    K   A+  +Y++ F    +P
Sbjct: 25  WLLSGLWVTVTVSLSAWVIALIVGSLFGVL-----RTVPNKKLAAIGTVYVAIF--RNIP 77

Query: 234 TLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V   + Y  +    PV     F      +  F S  I L  +TAA + E VRSG+ A+
Sbjct: 78  LIVQFFIWYLVIPELLPVSIGTWFKQLPPGAQFFSSSIICLGLFTAARVCEQVRSGINAL 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ  A +ALG T  +  R VLLP A R I+PPLTS++LN+ KNS++A  +G  DL + 
Sbjct: 138 PRGQRGAGLALGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQ 197

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +++ T Q  E  +     YL +++++   M  + AK
Sbjct: 198 ARQLVDYTAQTYESFIAVTVAYLLINLIVMTLMRIVEAK 236



 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/94 (31%), Positives = 46/94 (48%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L G   T  ++ S  + A I+G+L G  R   NK +A I 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKKLAAIG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            VYV +FRNIP +V  F  Y  +  +LP+   + 
Sbjct: 67  TVYVAIFRNIPLIVQFFIWYLVIPELLPVSIGTW 100


>gi|56808255|ref|ZP_00366025.1| COG0765: ABC-type amino acid transport system, permease component
           [Streptococcus pyogenes M49 591]
          Length = 210

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 8/172 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+
Sbjct: 46  YLVRAYISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYIS 97

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS + A+ +GQ EAA ALGL +    + ++LPQ  R  +PPL +  ++++K+SSLA 
Sbjct: 98  EVFRSSIEAIDKGQWEAAKALGLPYALMVKKIILPQVFRIAVPPLGNVIIDMVKSSSLAA 157

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +   D+      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 158 MITVPDIFQNAKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 209


>gi|315640932|ref|ZP_07896028.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483350|gb|EFU73850.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 269

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 5/225 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFL 228
           F N   +      + +   + +   V+  ++ L    +       K      L  I    
Sbjct: 21  FFNWELVYQYFPKILSALPVTLMIVVIATLVGLVLGSIIAFIRVEKIPILTQLSAIFVSF 80

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV +   Y +++  P L +   I  S+ +  F  +YI     TAAF +E +R+ 
Sbjct: 81  IRGTPILVQL---YVVYYGVPTLLEAVNIDVSSWNKIFF-IYITYGLNTAAFQSETIRAA 136

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +++VP  Q EAAIA GLT  ++ R V+LPQ +R  +P   +  + LL+++SLA  +G  D
Sbjct: 137 ILSVPATQKEAAIACGLTRVQSYRKVILPQMVRVALPSFGTTTVALLQDTSLAFTIGVID 196

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +V     I   T   +E  +    I++ LS ++      L  ++ 
Sbjct: 197 VVGKAKAIGAVTFHTLEGYVGAAVIFIVLSFVLERAFVWLEEQMK 241



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 38/99 (38%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +    +     Y   IL     T  +     +   ++G+++   R+    ++  +  ++
Sbjct: 18  MKSFFNWELVYQYFPKILSALPVTLMIVVIATLVGLVLGSIIAFIRVEKIPILTQLSAIF 77

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           V   R  P LV ++ +Y  V ++L   +  +     +F 
Sbjct: 78  VSFIRGTPILVQLYVVYYGVPTLLEAVNIDVSSWNKIFF 116


>gi|293365116|ref|ZP_06611833.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307702178|ref|ZP_07639138.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|291316566|gb|EFE57002.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307624191|gb|EFO03168.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 266

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PL       + G P LV + L Y       K +  Q+         P  +   +A +   
Sbjct: 75  PLQAFFVSFLKGTPILVQLMLTYYGIPLALKAINQQWGTGLNINAIPAALFAIVAFAFNE 134

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRVQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SLA + G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 195 TSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIEKKMAIS 252


>gi|262191876|ref|ZP_06050045.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
 gi|262032241|gb|EEY50810.1| amino acid ABC transporter permease protein [Vibrio cholerae CT
           5369-93]
          Length = 298

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALP-LLYIS 225
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L+++ 
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H  +         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLSLSMLFKQVEKR 291



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEI--------DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           ++            L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYQWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL----------SVLPI 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  +            +L  
Sbjct: 85  VLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRD 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +            L    L+      +   +++  IV +  A      +       
Sbjct: 145 HTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|194433179|ref|ZP_03065461.1| arginine ABC transporter, permease protein ArtM [Shigella
           dysenteriae 1012]
 gi|194418676|gb|EDX34763.1| arginine ABC transporter, permease protein ArtM [Shigella
           dysenteriae 1012]
 gi|332091020|gb|EGI96110.1| arginine transport system permease protein artM [Shigella
           dysenteriae 155-74]
          Length = 222

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPSQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 YSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPSQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|315647911|ref|ZP_07901012.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
 gi|315276557|gb|EFU39900.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus vortex V453]
          Length = 209

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 13/206 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + + + ++   L     T+       + S  LG V +L           K    L   
Sbjct: 1   MSMDYIVQISKPMLEGAQTTILLFFIAIIASIPLGFVFTLMV-----RSAIKPLAWLANT 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI  F   G P L+ +       F  PVL     IG   V   F++  +A     AA+ A
Sbjct: 56  YIYVF--RGTPLLLQMLF---FCFGLPVL---PVIGEYLVLDRFVAACLAFVLNYAAYFA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL+A+ +GQ EA+  LGL   + T  V+LPQ  R  +P ++++ + L+K+++L  
Sbjct: 108 EIFRGGLLAIDKGQYEASKVLGLNKWQTTTKVILPQMFRVALPAVSNESITLVKDTALLY 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIIL 368
           AV   +L+    T +N+    +   +
Sbjct: 168 AVAVPELLHFAYTAVNRDFTIMPFFI 193



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L F  +I +  +G +      SA K +AW+   Y+ VFR  P L+ + F 
Sbjct: 13  MLEGAQTTILLFFIAIIASIPLGFVFTLMVRSAIKPLAWLANTYIYVFRGTPLLLQMLFF 72


>gi|261339172|ref|ZP_05967030.1| hypothetical protein ENTCAN_05396 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319017|gb|EFC57955.1| arginine ABC transporter, permease protein ArtM [Enterobacter
           cancerogenus ATCC 35316]
          Length = 222

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S V+ ++L+L  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELMKGLHTSLTLTVASIVVALILALIFTII---LTLKTPVLVWIVRAYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  I      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSLQEYPVIWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      +YL ++ ++ L M  +  +    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGLVYLVVNGLLTLMMRLIERRALAFERR 221



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + ++ A I+  +          ++ WI R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASIVVALILALIFTIILTLKTPVLVWIVRAYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPSLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|104782882|ref|YP_609380.1| arginine/ornithine transport membrane protein AotM [Pseudomonas
           entomophila L48]
 gi|95111869|emb|CAK16593.1| arginine/ornithine transport membrane protein AotM [Pseudomonas
           entomophila L48]
          Length = 232

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 17/205 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            F  +  I L L      R   +        LY  T++I G P LV + L Y        
Sbjct: 31  FFGLLAAIPLGLM-----RVSKQPLVNMTAWLY--TYVIRGTPMLVQLFLIYY------G 77

Query: 251 LGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           L QF  +  S + P          +A +  T+A+ AEI+   L A P G++EAA A+G++
Sbjct: 78  LAQFEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKATPHGEIEAAKAIGMS 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R +LLP A+R  +P  +++ + +L+ +SLA  V   D+     T+  Q     E 
Sbjct: 138 RMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGAARTVNAQFYLPFEA 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            +     YL L+ ++         +
Sbjct: 198 YITAGVFYLCLTFILVRLFKLAERR 222


>gi|74311405|ref|YP_309824.1| arginine transporter permease subunit ArtM [Shigella sonnei Ss046]
 gi|73854882|gb|AAZ87589.1| arginine 3rd transport system permease protein [Shigella sonnei
           Ss046]
 gi|323165794|gb|EFZ51580.1| arginine transport system permease protein artM [Shigella sonnei
           53G]
          Length = 222

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCSALGMSKKDTLA-LLLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 YSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|238793127|ref|ZP_04636755.1| ABC-type amino acid transport system permease component [Yersinia
           intermedia ATCC 29909]
 gi|238727500|gb|EEQ19026.1| ABC-type amino acid transport system permease component [Yersinia
           intermedia ATCC 29909]
          Length = 251

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   + S + G+  ++  T L        G    +L       
Sbjct: 10  WTYLLWGTFPDGPLGGAALTLLISIMAGVASAILGTVLGVLLAMSRGVWAGVLAAFLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 224


>gi|119946449|ref|YP_944129.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865053|gb|ABM04530.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 359

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 19/275 (6%)

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
              LV  I   ++   + IP + V   L      V  +            +         
Sbjct: 97  RPNLVGLISIAFLLSLKFIPNIKVKLGLMLIYPFVCFVLISGG-WFGLEEVPTEKWGGLM 155

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A   + SF +GIVL+L      R       K L + +I            LI +
Sbjct: 156 LTILVAAVGIIASFPIGIVLAL-----GRQSEMPILKTLCVGFIEFIRGVP-----LITI 205

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +      P+     F        + +   I ++ + +A+IAE++R GL A+P+GQ EAA
Sbjct: 206 LFMASVVLPL-----FFSDGIDFDKLLRALIGITLFQSAYIAEVIRGGLQAIPKGQYEAA 260

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL + +   L++LPQA++  IP L   +++L K+++L + +G  D++++     +  
Sbjct: 261 ESLGLGYWQGMLLIILPQALKISIPNLVGSFISLFKDTTLVLIIGLFDVLAMVTLTTSDA 320

Query: 361 ---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  IE  +    IY      ++ +   +  K 
Sbjct: 321 LWLGYEIEGYVFVTMIYWVCCFSMSQYSKSVERKY 355


>gi|15800616|ref|NP_286630.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 EDL933]
 gi|15830198|ref|NP_308971.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. Sakai]
 gi|16128829|ref|NP_415382.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24112231|ref|NP_706741.1| arginine transporter permease subunit ArtM [Shigella flexneri 2a
           str. 301]
 gi|26246884|ref|NP_752924.1| arginine transporter permease subunit ArtM [Escherichia coli
           CFT073]
 gi|30062343|ref|NP_836514.1| arginine transporter permease subunit ArtM [Shigella flexneri 2a
           str. 2457T]
 gi|82543349|ref|YP_407296.1| arginine transporter permease subunit ArtM [Shigella boydii Sb227]
 gi|89107712|ref|AP_001492.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           W3110]
 gi|91209895|ref|YP_539881.1| arginine transporter permease subunit ArtM [Escherichia coli UTI89]
 gi|110641062|ref|YP_668792.1| arginine transporter permease subunit ArtM [Escherichia coli 536]
 gi|110804858|ref|YP_688378.1| arginine transporter permease subunit ArtM [Shigella flexneri 5
           str. 8401]
 gi|117623041|ref|YP_851954.1| arginine transporter permease subunit ArtM [Escherichia coli APEC
           O1]
 gi|157155015|ref|YP_001462059.1| arginine transporter permease subunit ArtM [Escherichia coli
           E24377A]
 gi|157160384|ref|YP_001457702.1| arginine transporter permease subunit ArtM [Escherichia coli HS]
 gi|168750050|ref|ZP_02775072.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4113]
 gi|168756660|ref|ZP_02781667.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4401]
 gi|168763284|ref|ZP_02788291.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767376|ref|ZP_02792383.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4486]
 gi|168776407|ref|ZP_02801414.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4196]
 gi|168779418|ref|ZP_02804425.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787087|ref|ZP_02812094.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC869]
 gi|168799852|ref|ZP_02824859.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC508]
 gi|170020736|ref|YP_001725690.1| arginine transporter permease subunit ArtM [Escherichia coli ATCC
           8739]
 gi|170080520|ref|YP_001729840.1| arginine ABC transporter membrane protein [Escherichia coli str.
           K-12 substr. DH10B]
 gi|187734247|ref|YP_001880942.1| arginine transporter permease subunit ArtM [Shigella boydii CDC
           3083-94]
 gi|188494552|ref|ZP_03001822.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           53638]
 gi|191166212|ref|ZP_03028046.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           B7A]
 gi|191172103|ref|ZP_03033647.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           F11]
 gi|193064475|ref|ZP_03045556.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E22]
 gi|193069388|ref|ZP_03050343.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E110019]
 gi|194428166|ref|ZP_03060709.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           B171]
 gi|194438469|ref|ZP_03070559.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           101-1]
 gi|195936910|ref|ZP_03082292.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809637|ref|ZP_03251974.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816065|ref|ZP_03257244.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822686|ref|ZP_03263005.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4042]
 gi|209396120|ref|YP_002269534.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4115]
 gi|209918110|ref|YP_002292194.1| arginine transporter permease subunit ArtM [Escherichia coli SE11]
 gi|215485992|ref|YP_002328423.1| arginine transporter permease subunit ArtM [Escherichia coli
           O127:H6 str. E2348/69]
 gi|217325635|ref|ZP_03441719.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. TW14588]
 gi|218553447|ref|YP_002386360.1| arginine transporter permease subunit ArtM [Escherichia coli IAI1]
 gi|218557765|ref|YP_002390678.1| arginine transporter permease subunit ArtM [Escherichia coli S88]
 gi|218688643|ref|YP_002396855.1| arginine transporter permease subunit ArtM [Escherichia coli ED1a]
 gi|218694335|ref|YP_002402002.1| arginine transporter permease subunit ArtM [Escherichia coli 55989]
 gi|218699237|ref|YP_002406866.1| arginine transporter permease subunit ArtM [Escherichia coli IAI39]
 gi|227884175|ref|ZP_04001980.1| arginine transporter permease subunit ArtM [Escherichia coli 83972]
 gi|237707175|ref|ZP_04537656.1| arginine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|238900120|ref|YP_002925916.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|253774109|ref|YP_003036940.1| arginine transporter permease subunit ArtM [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160976|ref|YP_003044084.1| arginine transporter permease ArtM [Escherichia coli B str. REL606]
 gi|254792060|ref|YP_003076897.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. TW14359]
 gi|256021018|ref|ZP_05434883.1| arginine transporter permease subunit ArtM [Shigella sp. D9]
 gi|256023512|ref|ZP_05437377.1| arginine transporter permease subunit ArtM [Escherichia sp.
           4_1_40B]
 gi|260843112|ref|YP_003220890.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O103:H2 str. 12009]
 gi|260854153|ref|YP_003228044.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O26:H11 str. 11368]
 gi|260867034|ref|YP_003233436.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O111:H- str. 11128]
 gi|261225515|ref|ZP_05939796.1| arginine transporter subunit; membrane component of ABC superfamily
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258516|ref|ZP_05951049.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O157:H7 str. FRIK966]
 gi|291281863|ref|YP_003498681.1| Arginine transport system permease protein artM [Escherichia coli
           O55:H7 str. CB9615]
 gi|293414142|ref|ZP_06656791.1| artM [Escherichia coli B185]
 gi|293433159|ref|ZP_06661587.1| artM [Escherichia coli B088]
 gi|300817039|ref|ZP_07097258.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300824002|ref|ZP_07104124.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300902394|ref|ZP_07120377.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300921108|ref|ZP_07137492.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300924470|ref|ZP_07140440.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300929329|ref|ZP_07144803.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300947048|ref|ZP_07161270.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300957065|ref|ZP_07169310.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300991845|ref|ZP_07179670.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300993465|ref|ZP_07180407.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|301020605|ref|ZP_07184682.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|301027625|ref|ZP_07190946.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|301051211|ref|ZP_07198040.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|301305367|ref|ZP_07211462.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301646301|ref|ZP_07246191.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|306812690|ref|ZP_07446883.1| arginine transporter permease subunit ArtM [Escherichia coli NC101]
 gi|307137489|ref|ZP_07496845.1| arginine transporter permease subunit ArtM [Escherichia coli H736]
 gi|307311751|ref|ZP_07591391.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309795344|ref|ZP_07689762.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|312969072|ref|ZP_07783279.1| arginine transport system permease protein artM [Escherichia coli
           2362-75]
 gi|312970985|ref|ZP_07785164.1| arginine transport system permease protein artM [Escherichia coli
           1827-70]
 gi|331641382|ref|ZP_08342517.1| arginine transport system permease protein ArtM [Escherichia coli
           H736]
 gi|331646129|ref|ZP_08347232.1| arginine transport system permease protein ArtM [Escherichia coli
           M605]
 gi|331651879|ref|ZP_08352898.1| arginine transport system permease protein ArtM [Escherichia coli
           M718]
 gi|331656934|ref|ZP_08357896.1| arginine transport system permease protein ArtM [Escherichia coli
           TA206]
 gi|331662273|ref|ZP_08363196.1| arginine transport system permease protein ArtM [Escherichia coli
           TA143]
 gi|331667235|ref|ZP_08368100.1| arginine transport system permease protein ArtM [Escherichia coli
           TA271]
 gi|331672400|ref|ZP_08373191.1| arginine transport system permease protein ArtM [Escherichia coli
           TA280]
 gi|331676649|ref|ZP_08377345.1| arginine transport system permease protein ArtM [Escherichia coli
           H591]
 gi|83287902|sp|P0AE32|ARTM_ECO57 RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|83287903|sp|P0AE31|ARTM_ECOL6 RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|83287904|sp|P0AE30|ARTM_ECOLI RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|83287905|sp|P0AE33|ARTM_SHIFL RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|12513882|gb|AAG55240.1|AE005267_5 arginine 3rd transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|26107284|gb|AAN79467.1|AE016758_71 Arginine transport system permease protein artM [Escherichia coli
           CFT073]
 gi|1651394|dbj|BAA35575.1| arginine transporter subunit [Escherichia coli str. K12 substr.
           W3110]
 gi|1787086|gb|AAC73948.1| arginine transporter subunit [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13360403|dbj|BAB34367.1| arginine 3rd transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|24051078|gb|AAN42448.1| arginine 3rd transport system permease protein [Shigella flexneri
           2a str. 301]
 gi|30040588|gb|AAP16320.1| arginine 3rd transport system permease protein [Shigella flexneri
           2a str. 2457T]
 gi|81244760|gb|ABB65468.1| arginine 3rd transport system permease protein [Shigella boydii
           Sb227]
 gi|91071469|gb|ABE06350.1| arginine 3rd transport system permease protein [Escherichia coli
           UTI89]
 gi|110342654|gb|ABG68891.1| arginine transport system permease protein ArtM [Escherichia coli
           536]
 gi|110614406|gb|ABF03073.1| arginine 3rd transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|115512165|gb|ABJ00240.1| arginine 3rd transport system permease protein [Escherichia coli
           APEC O1]
 gi|157066064|gb|ABV05319.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           HS]
 gi|157077045|gb|ABV16753.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E24377A]
 gi|169755664|gb|ACA78363.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169888355|gb|ACB02062.1| arginine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187431239|gb|ACD10513.1| arginine ABC transporter, permease protein ArtM [Shigella boydii
           CDC 3083-94]
 gi|187768229|gb|EDU32073.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4196]
 gi|188015742|gb|EDU53864.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4113]
 gi|188489751|gb|EDU64854.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           53638]
 gi|189003025|gb|EDU72011.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4076]
 gi|189356287|gb|EDU74706.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363350|gb|EDU81769.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4486]
 gi|189366529|gb|EDU84945.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4501]
 gi|189373035|gb|EDU91451.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC869]
 gi|189377762|gb|EDU96178.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC508]
 gi|190903821|gb|EDV63536.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           B7A]
 gi|190907630|gb|EDV67225.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           F11]
 gi|192928937|gb|EDV82550.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E22]
 gi|192957341|gb|EDV87789.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           E110019]
 gi|194413726|gb|EDX30005.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           B171]
 gi|194422693|gb|EDX38690.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           101-1]
 gi|208729438|gb|EDZ79039.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732713|gb|EDZ81401.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738171|gb|EDZ85854.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4042]
 gi|209157520|gb|ACI34953.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC4115]
 gi|209775318|gb|ACI85971.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775320|gb|ACI85972.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775322|gb|ACI85973.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775324|gb|ACI85974.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209775326|gb|ACI85975.1| arginine 3rd transport system permease protein [Escherichia coli]
 gi|209911369|dbj|BAG76443.1| arginine ABC transporter permease component [Escherichia coli SE11]
 gi|215264064|emb|CAS08406.1| arginine 3rd transport system permease protein ArtM; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|217321856|gb|EEC30280.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. TW14588]
 gi|218351067|emb|CAU96771.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli 55989]
 gi|218360215|emb|CAQ97765.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI1]
 gi|218364534|emb|CAR02216.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli S88]
 gi|218369223|emb|CAR16978.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli IAI39]
 gi|218426207|emb|CAR07031.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli ED1a]
 gi|222032590|emb|CAP75329.1| Arginine transport system permease protein artM [Escherichia coli
           LF82]
 gi|226898385|gb|EEH84644.1| arginine transporter subunit [Escherichia sp. 3_2_53FAA]
 gi|227838927|gb|EEJ49393.1| arginine transporter permease subunit ArtM [Escherichia coli 83972]
 gi|238860007|gb|ACR62005.1| arginine transporter subunit [Escherichia coli BW2952]
 gi|242376677|emb|CAQ31389.1| artM, subunit of arginine ABC transporter [Escherichia coli
           BL21(DE3)]
 gi|253325153|gb|ACT29755.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972877|gb|ACT38548.1| arginine transporter subunit [Escherichia coli B str. REL606]
 gi|253977091|gb|ACT42761.1| arginine transporter subunit [Escherichia coli BL21(DE3)]
 gi|254591460|gb|ACT70821.1| arginine transporter subunit; membrane component of ABC superfamily
           [Escherichia coli O157:H7 str. TW14359]
 gi|257752802|dbj|BAI24304.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O26:H11 str. 11368]
 gi|257758259|dbj|BAI29756.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O103:H2 str. 12009]
 gi|257763390|dbj|BAI34885.1| arginine 3rd transport system permease protein ArtM [Escherichia
           coli O111:H- str. 11128]
 gi|260449992|gb|ACX40414.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177996|dbj|BAI54326.1| arginine ABC transporter permease component [Escherichia coli SE15]
 gi|281600184|gb|ADA73168.1| Arginine 3rd transport system permease protein [Shigella flexneri
           2002017]
 gi|284920714|emb|CBG33777.1| arginine ABC transporter, permease protein [Escherichia coli 042]
 gi|290761736|gb|ADD55697.1| Arginine transport system permease protein artM [Escherichia coli
           O55:H7 str. CB9615]
 gi|291323978|gb|EFE63400.1| artM [Escherichia coli B088]
 gi|291434200|gb|EFF07173.1| artM [Escherichia coli B185]
 gi|294493629|gb|ADE92385.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           IHE3034]
 gi|299879261|gb|EFI87472.1| ABC transporter, permease protein [Escherichia coli MS 196-1]
 gi|300297118|gb|EFJ53503.1| ABC transporter, permease protein [Escherichia coli MS 185-1]
 gi|300305455|gb|EFJ59975.1| ABC transporter, permease protein [Escherichia coli MS 200-1]
 gi|300316150|gb|EFJ65934.1| ABC transporter, permease protein [Escherichia coli MS 175-1]
 gi|300398623|gb|EFJ82161.1| ABC transporter, permease protein [Escherichia coli MS 69-1]
 gi|300405541|gb|EFJ89079.1| ABC transporter, permease protein [Escherichia coli MS 84-1]
 gi|300406579|gb|EFJ90117.1| ABC transporter, permease protein [Escherichia coli MS 45-1]
 gi|300411959|gb|EFJ95269.1| ABC transporter, permease protein [Escherichia coli MS 115-1]
 gi|300419355|gb|EFK02666.1| ABC transporter, permease protein [Escherichia coli MS 182-1]
 gi|300453331|gb|EFK16951.1| ABC transporter, permease protein [Escherichia coli MS 116-1]
 gi|300462748|gb|EFK26241.1| ABC transporter, permease protein [Escherichia coli MS 187-1]
 gi|300523513|gb|EFK44582.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300530391|gb|EFK51453.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300839385|gb|EFK67145.1| ABC transporter, permease protein [Escherichia coli MS 124-1]
 gi|301075458|gb|EFK90264.1| ABC transporter, permease protein [Escherichia coli MS 146-1]
 gi|305853453|gb|EFM53892.1| arginine transporter permease subunit ArtM [Escherichia coli NC101]
 gi|306908306|gb|EFN38805.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307552704|gb|ADN45479.1| arginine transport system permease protein [Escherichia coli ABU
           83972]
 gi|307627730|gb|ADN72034.1| arginine transporter permease subunit ArtM [Escherichia coli UM146]
 gi|308120994|gb|EFO58256.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|309701139|emb|CBJ00437.1| arginine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|310336746|gb|EFQ01913.1| arginine transport system permease protein artM [Escherichia coli
           1827-70]
 gi|312286474|gb|EFR14387.1| arginine transport system permease protein artM [Escherichia coli
           2362-75]
 gi|312945378|gb|ADR26205.1| arginine transporter permease subunit ArtM [Escherichia coli O83:H1
           str. NRG 857C]
 gi|313650232|gb|EFS14644.1| arginine transport system permease protein artM [Shigella flexneri
           2a str. 2457T]
 gi|315060146|gb|ADT74473.1| arginine transporter subunit [Escherichia coli W]
 gi|315135510|dbj|BAJ42669.1| arginine transport system permease protein artM [Escherichia coli
           DH1]
 gi|315257897|gb|EFU37865.1| ABC transporter, permease protein [Escherichia coli MS 85-1]
 gi|315287307|gb|EFU46718.1| ABC transporter, permease protein [Escherichia coli MS 110-3]
 gi|315292536|gb|EFU51888.1| ABC transporter, permease protein [Escherichia coli MS 153-1]
 gi|315299390|gb|EFU58642.1| ABC transporter, permease protein [Escherichia coli MS 16-3]
 gi|320175301|gb|EFW50407.1| Arginine ABC transporter, permease protein ArtM [Shigella
           dysenteriae CDC 74-1112]
 gi|320177805|gb|EFW52791.1| Arginine ABC transporter, permease protein ArtM [Shigella boydii
           ATCC 9905]
 gi|320183199|gb|EFW58057.1| Arginine ABC transporter, permease protein ArtM [Shigella flexneri
           CDC 796-83]
 gi|320192654|gb|EFW67295.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. EC1212]
 gi|320196644|gb|EFW71267.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           WV_060327]
 gi|320199096|gb|EFW73693.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           EC4100B]
 gi|320637731|gb|EFX07523.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. G5101]
 gi|320642854|gb|EFX12055.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H- str. 493-89]
 gi|320648311|gb|EFX16966.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H- str. H 2687]
 gi|320654149|gb|EFX22217.1| arginine transporter permease subunit ArtM [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320659773|gb|EFX27329.1| arginine transporter permease subunit ArtM [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320664243|gb|EFX31394.1| arginine transporter permease subunit ArtM [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323155765|gb|EFZ41934.1| arginine transport system permease protein artM [Escherichia coli
           EPECa14]
 gi|323159683|gb|EFZ45662.1| arginine transport system permease protein artM [Escherichia coli
           E128010]
 gi|323172172|gb|EFZ57810.1| arginine transport system permease protein artM [Escherichia coli
           LT-68]
 gi|323175517|gb|EFZ61112.1| arginine transport system permease protein artM [Escherichia coli
           1180]
 gi|323185175|gb|EFZ70540.1| arginine transport system permease protein artM [Escherichia coli
           1357]
 gi|323190683|gb|EFZ75952.1| arginine transport system permease protein artM [Escherichia coli
           RN587/1]
 gi|323379296|gb|ADX51564.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323937968|gb|EGB34230.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1520]
 gi|323942778|gb|EGB38943.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E482]
 gi|323947115|gb|EGB43126.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H120]
 gi|323953435|gb|EGB49301.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H252]
 gi|323958150|gb|EGB53859.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H263]
 gi|323962974|gb|EGB58546.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli H489]
 gi|323969575|gb|EGB64863.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TA007]
 gi|324009773|gb|EGB78992.1| ABC transporter, permease protein [Escherichia coli MS 57-2]
 gi|324013023|gb|EGB82242.1| ABC transporter, permease protein [Escherichia coli MS 60-1]
 gi|324015941|gb|EGB85160.1| ABC transporter, permease protein [Escherichia coli MS 117-3]
 gi|324116075|gb|EGC09999.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli E1167]
 gi|326338245|gb|EGD62074.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. 1125]
 gi|326346222|gb|EGD69960.1| Arginine ABC transporter, permease protein ArtM [Escherichia coli
           O157:H7 str. 1044]
 gi|331038180|gb|EGI10400.1| arginine transport system permease protein ArtM [Escherichia coli
           H736]
 gi|331044881|gb|EGI17008.1| arginine transport system permease protein ArtM [Escherichia coli
           M605]
 gi|331050157|gb|EGI22215.1| arginine transport system permease protein ArtM [Escherichia coli
           M718]
 gi|331055182|gb|EGI27191.1| arginine transport system permease protein ArtM [Escherichia coli
           TA206]
 gi|331060695|gb|EGI32659.1| arginine transport system permease protein ArtM [Escherichia coli
           TA143]
 gi|331065591|gb|EGI37484.1| arginine transport system permease protein ArtM [Escherichia coli
           TA271]
 gi|331070595|gb|EGI41959.1| arginine transport system permease protein ArtM [Escherichia coli
           TA280]
 gi|331075338|gb|EGI46636.1| arginine transport system permease protein ArtM [Escherichia coli
           H591]
 gi|332088880|gb|EGI93992.1| arginine transport system permease protein artM [Shigella boydii
           5216-82]
 gi|332097160|gb|EGJ02143.1| arginine transport system permease protein artM [Shigella boydii
           3594-74]
 gi|332104597|gb|EGJ07943.1| arginine transporter subunit [Shigella sp. D9]
          Length = 222

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 YSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|307703835|ref|ZP_07640776.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|307622670|gb|EFO01666.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 213

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 102/232 (43%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +    L+  ++T+   A + +FS  LGIV++            +      L+ +
Sbjct: 1   MSYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFA-------LQVRWEPLHYLIDL 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                       +  IA     AA+ AEI
Sbjct: 54  YIWVMRGTPLLLQLIFIYYV-----------LPSIGIRLDRLPAAVIAFVLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+  +P+GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+
Sbjct: 103 FRGGIETIPKGQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +DL+    T  N+    + + L    IYL +  ++ +   RL  K +   
Sbjct: 163 GISDLILASRTAANRDASLVPMFL-AGAIYLIMIGLVTIVAKRLEKKYSYYR 213


>gi|307132298|ref|YP_003884314.1| putative amino acid ABC transporter permease [Dickeya dadantii
           3937]
 gi|306529827|gb|ADM99757.1| Putative amino acid ABC transporter, permease protein [Dickeya
           dadantii 3937]
          Length = 218

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 84/223 (37%), Gaps = 11/223 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +           +       + S        L    L      K    L L  +   + 
Sbjct: 1   MMTFTDWDIVRNLLLAGRWTVLLSLAAFFGGGLVTLPLLLLSLTKRRWPLRLTRLYADVF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLGLFGIDVSPWTAAALALTLFTSAFLLDIWHGSV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA   LGL+  +    V+ PQAMR  I P     + ++K ++LA  +GF +L
Sbjct: 110 QALPKGQWEACRCLGLSFTQTLTRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 170 TKAGTMLNNVTFQPFKVFGLVALGYFLLCYPLSYYSRYLEKKF 212


>gi|197284335|ref|YP_002150207.1| glutamate/aspartate ABC transporter permease [Proteus mirabilis
           HI4320]
 gi|227358521|ref|ZP_03842846.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
 gi|194681822|emb|CAR41082.1| glutamate/aspartate ABC transporter, permease protein [Proteus
           mirabilis HI4320]
 gi|227161232|gb|EEI46306.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
          Length = 224

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L F    M    KI + + V+GI+       + R    K        Y
Sbjct: 1   MYEFDWSSVVPSLPFLMDGMVITLKITITAIVIGILWGTIL-AVMRLSTFKPISWFAAAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++TF       LV++ L + L    P + Q             +S  +A S + AA+ +E
Sbjct: 60  VNTFRSIP---LVMVLLWFYL--IVPNILQNVLGLSPKSDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ +GQ  A++ALG+T  +  RLV+LPQA R++IP L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISKGQFSASLALGMTKSQTMRLVILPQAFRAMIPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   D       I  + G  +E+IL   F+Y  +S   ++ +N L  +
Sbjct: 175 LSLTDFFRTAANIGERDGTQVEMILFAGFVYFIISFSASMLVNFLKKR 222



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G V T  +  + ++   + GT++   RLS  K ++W    YV  FR+IP ++V+ + 
Sbjct: 16  LMDGMVITLKITITAIVIGILWGTILAVMRLSTFKPISWFAAAYVNTFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           Y  V ++
Sbjct: 76  YLIVPNI 82


>gi|170695841|ref|ZP_02886982.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139265|gb|EDT07452.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 216

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +    +G  +++     +R    +  +     Y+  F                +  
Sbjct: 22  IGVSLTGLFIGFFVAVGVCA-ARLSPNRAARRFGGAYVFFFR------------GVPMLV 68

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++       G  VSP  ++   A+S  +A++IAEI+R G +++P G +EAA  LGL+
Sbjct: 69  QLLLVYYLLPFAGINVSP-LVAAISAVSLCSASYIAEILRGGFLSIPPGHIEAARMLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L+PQA R  +P L ++ + L+K SSL   VG A+L      +   T + +E 
Sbjct: 128 PFDTLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNLAASTYRPLEA 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +    IY  +   +AL  +    ++ 
Sbjct: 188 YVAAGLIYFVICGALALVAHAAEYRLK 214



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +L   + T  ++ +G+     +   V A RLS N+        YV  FR +P 
Sbjct: 14  LLHAALATIGVSLTGLFIGFFVAVGVCAARLSPNRAARRFGGAYVFFFRGVPM 66


>gi|90409068|ref|ZP_01217193.1| amino acid ABC transporter, permease protein [Psychromonas sp.
           CNPT3]
 gi|90309825|gb|EAS37985.1| amino acid ABC transporter, permease protein [Psychromonas sp.
           CNPT3]
          Length = 359

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 61/275 (22%), Positives = 115/275 (41%), Gaps = 19/275 (6%)

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
              LV  I   ++   + +P   +  F+      +        V      +         
Sbjct: 97  RPDLVVLITIAFLACVKWLPHFKIKVFIILIYPFICFFLISGGVF-GLEHVATEKWGGLM 155

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A   + SF +GIVL+L      R       K   + +I            LI +
Sbjct: 156 LTLIVAAVGIIVSFPIGIVLAL-----GRQSDLPILKFFCITFIEFIRGVP-----LITI 205

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +      P+     F        + +   I ++ + +A+IAE++R GL A+P+GQ EAA
Sbjct: 206 LFMASVILPL-----FFHDGIDFDKLLRALIGITLFQSAYIAEVIRGGLQAIPKGQYEAA 260

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            +LGL++ K   L++LPQA++  IP L   +++L K+++L + +G  D++++     + +
Sbjct: 261 KSLGLSYWKGMLLIILPQALKISIPNLVGSFISLFKDTTLVLIIGLFDVLAMVTLTNSDS 320

Query: 361 ---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  IE  +    IY      ++ +   +  K 
Sbjct: 321 DWLGYEIEGYVFVTMIYWIFCFSMSQYSKHIEQKF 355


>gi|257888300|ref|ZP_05667953.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257896810|ref|ZP_05676463.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257899737|ref|ZP_05679390.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|293572975|ref|ZP_06683918.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           E980]
 gi|257824354|gb|EEV51286.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257833375|gb|EEV59796.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257837649|gb|EEV62723.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|291606953|gb|EFF36332.1| amino acid ABC transporter, permease protein [Enterococcus faecium
           E980]
          Length = 213

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +  + L     T+       + S  LGI+L+L         H K  +    L  
Sbjct: 1   MEYLIEVMPQLLVGALTTLKLFLFTLIGSLPLGIILALGL-----SLHFKPLRYF--LQT 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   +                   V   F +  IA     AA+ AEI
Sbjct: 54  YVWIMRGTPLLLQLIFVFY-----------GLPTIGIVFDRFEAALIAFILNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++P+GQ EAA  L L+  +    +++PQ  + ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGIQSIPQGQYEAAQVLQLSPFQTVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYIL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D++  G   + +    +  +L    IYL+L+ ++ + M ++  K+    
Sbjct: 163 GLGDVMRAGKIAMERDA-TLLPLLGVAIIYLTLTGILTIVMKQVEGKLNYYR 213



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 38/100 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG + T  L    +I +  +G ++  G     K + +  + YV + R  P L+ + F+
Sbjct: 11  LLVGALTTLKLFLFTLIGSLPLGIILALGLSLHFKPLRYFLQTYVWIMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + ++  + D          LN              + 
Sbjct: 71  FYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSI 110


>gi|153954685|ref|YP_001395450.1| hypothetical protein CKL_2067 [Clostridium kluyveri DSM 555]
 gi|146347543|gb|EDK34079.1| Hypothetical protein CKL_2067 [Clostridium kluyveri DSM 555]
          Length = 253

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 9/229 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      +      +    +I  FS V+ +V+ +  T  ++    K  + +  +YIS   
Sbjct: 21  LEFMISKMPIILNALPITLEILFFSVVIALVVGMILT-YAKVGKNKVVRCIASIYISF-- 77

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P +V + L +      P++     I  +  +   +   IA S   AAF AEI RS 
Sbjct: 78  MRGTPMIVQLLLAF---IGIPLILDSFGISTANWN-NIIYAIIAFSLNEAAFFAEIFRSA 133

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
            + + +GQ+EA  ++G+T  +  R ++  Q     +P  T+  + L+KN+SL +A+G  D
Sbjct: 134 YLDIDKGQIEAGQSIGMTKFQTFRRIIFVQVAAKALPNTTNMIIELMKNTSLGIAIGVTD 193

Query: 349 LVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L+ +   I          E  ++  FIY  + +++ +  + + A++   
Sbjct: 194 LMGMAKQISYNNYGVGQTETFIVAAFIYWIMGLILTIVSSNITARLNRY 242



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  + F  ++ A ++G ++   ++  NK+V  I  +Y+   R  P +V +   
Sbjct: 31  ILNALPITLEILFFSVVIALVVGMILTYAKVGKNKVVRCIASIYISFMRGTPMIVQLLLA 90

Query: 149 YKSVLSV 155
           +  +  +
Sbjct: 91  FIGIPLI 97


>gi|71734665|ref|YP_275673.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|257482806|ref|ZP_05636847.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289650401|ref|ZP_06481744.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298488144|ref|ZP_07006181.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71555218|gb|AAZ34429.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157423|gb|EFH98506.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330988693|gb|EGH86796.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331012329|gb|EGH92385.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 232

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|57167933|ref|ZP_00367073.1| amino acid ABC tansporter, permease protein [Campylobacter coli
           RM2228]
 gi|305432041|ref|ZP_07401208.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Campylobacter coli JV20]
 gi|57021055|gb|EAL57719.1| amino acid ABC tansporter, permease protein [Campylobacter coli
           RM2228]
 gi|304445125|gb|EFM37771.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Campylobacter coli JV20]
          Length = 247

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 112/262 (42%), Gaps = 20/262 (7%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM--FLNNRGLSFPTLTMDTNAKIFVFSF 194
           +NI   V    +        PI    I    G   +           +      +   S 
Sbjct: 4   KNIRIFVFFAIILFWGYFSFPIEILQIKEADGAINYGYTPNAQAYIKSYFITLLLTACSA 63

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G+V+  F+  + R    K    +   YI   +I G P ++ + +   + F        
Sbjct: 64  IIGVVVG-FSLAILRFSKIKVLNFIIDEYID--IIRGTPVILQLMIFAFVIF-------- 112

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                 T      +   AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + +
Sbjct: 113 ------TFIDNLYAAIFALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEI 166

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA ++I+P L +++++L K +S+   +   D+     ++        + ++    +Y
Sbjct: 167 ILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPLIFTGLVY 225

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
                + + F  +L  +++  +
Sbjct: 226 YVSVKIFSYFAKKLELRMSKND 247



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 28/70 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
             A A +  +  T  L     I   ++G  +   R S  K++ +I   Y+++ R  P ++
Sbjct: 43  PNAQAYIKSYFITLLLTACSAIIGVVVGFSLAILRFSKIKVLNFIIDEYIDIIRGTPVIL 102

Query: 144 VIFFLYKSVL 153
            +      + 
Sbjct: 103 QLMIFAFVIF 112


>gi|218548380|ref|YP_002382171.1| arginine transporter permease subunit ArtM [Escherichia fergusonii
           ATCC 35469]
 gi|218355921|emb|CAQ88536.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia fergusonii ATCC 35469]
 gi|323976754|gb|EGB71842.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia coli TW10509]
          Length = 222

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 102/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|145301209|ref|YP_001144050.1| ABC-type polar amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142853981|gb|ABO92302.1| ABC-type polar amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 222

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 112/231 (48%), Gaps = 11/231 (4%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++ F +             + T  ++ ++ FVL +VLSL    + R F       L +LY
Sbjct: 1   MMEFDLEYTLGLFPILLKYLGTTMEMALWGFVLALVLSLTL-AIVRVFRIPVIHWLAMLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           IS F   G P LV + L   L++  P L              F +  + L+ + AA++AE
Sbjct: 60  ISFF--RGTPLLVQLFL---LYYGLPQLFPVF-----VGMDAFTAAIVGLTLHFAAYMAE 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+ ++ + + QMEAA+++G++  +A R ++LPQA R   P L + +++++K++SLA  
Sbjct: 110 SIRAAILGIHKSQMEAALSIGMSRYQAMRRIILPQAARIATPSLMNYFIDMIKSTSLAFT 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G A+++       + + +  E  +    +Y  + I+     + L   +  
Sbjct: 170 LGVAEIMGKAQMEASSSFKFFESFMAVALVYWVVVIIFTRLQHLLEVHLNR 220



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G + A ++   +   R+    ++ W+  +Y+  FR  P LV +F L
Sbjct: 16  LLKYLGTTMEMALWGFVLALVLSLTLAIVRVFRIPVIHWLAMLYISFFRGTPLLVQLFLL 75

Query: 149 YKSVLSVLP 157
           Y  +  + P
Sbjct: 76  YYGLPQLFP 84


>gi|311109072|ref|YP_003981925.1| general L-amino acid transporter permease AAPM [Achromobacter
           xylosoxidans A8]
 gi|310763761|gb|ADP19210.1| general L-amino acid transport system permease protein AAPM
           [Achromobacter xylosoxidans A8]
          Length = 366

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 19/281 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPT 180
             L+A +  V V V   I             + +  +        FG+ ++ N       
Sbjct: 101 RPLIATVILVAVIVCSGIRRFWNWKLAVIWTVGLTAVALLMWGGVFGLSYVENARWGGLP 160

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+  +     F+F +G++L+L      R       KAL ++YI       L +L+ ++ 
Sbjct: 161 LTLILSTFGIAFAFPIGVLLAL-----GRRSKMPAIKALCVVYIELIRGVPLISLLFMS- 214

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+       + +   IA+  + AA+IAE VR GL A+P+GQ E A
Sbjct: 215 ---------SVMLPLFLPEGFSIDKLLRAQIAIIMFAAAYIAETVRGGLQAIPKGQYEGA 265

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV---SVGGTII 357
            +LGL + +  R ++LPQA++ +IPPL S ++ L K++SL V +G  DL        +  
Sbjct: 266 DSLGLNYWQQMRKIILPQALKIVIPPLVSIFIALFKDTSLVVIIGIFDLTLAAKAALSDA 325

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  +E  L    IY      ++ +   L  ++A    +
Sbjct: 326 AWRGFGVEAYLFISLIYFVFCFSMSKYSQALEKRLATGHAR 366



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 34/78 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A   G   T  L+  G+  A  IG L+  GR S    +  +C VY+E+ R +P + ++F 
Sbjct: 154 ARWGGLPLTLILSTFGIAFAFPIGVLLALGRRSKMPAIKALCVVYIELIRGVPLISLLFM 213

Query: 148 LYKSVLSVLPIPDHSIVL 165
               +   LP       L
Sbjct: 214 SSVMLPLFLPEGFSIDKL 231


>gi|298294200|ref|YP_003696139.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930711|gb|ADH91520.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 226

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 14/223 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + + S +LG++L       +     K  +     Y+  F      
Sbjct: 11  HSWPSLLNGLGMTVLLTLISCLLGVILGTL-CAWASLKGPKPLRWFIRAYVEFFRNTPF- 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
               +   + + F  P L              F +  +AL+    A+  EI+R+G+ A P
Sbjct: 69  ----LGQIFFIFFGLPAL--------GLRMDPFTAALVALTINLTAYACEIIRAGIEATP 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA +LGL   +A  L+++P A + + P +TSQ + +L  S+L   +  A+L    
Sbjct: 117 AGQFEAASSLGLKPAQAFFLIIIPPAFQRVWPAMTSQLVIMLLASALCSQISVAELSYEA 176

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             I ++T +  E  ++   +YL+L+++    +  +  +    E
Sbjct: 177 NMIASRTFRNFEAYIVVTIMYLALAVLFRELLTWVGRRFVFGE 219



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 37/87 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             ++L G   T  L     +   I+GTL     L   K + W  R YVE FRN P L  I
Sbjct: 13  WPSLLNGLGMTVLLTLISCLLGVILGTLCAWASLKGPKPLRWFIRAYVEFFRNTPFLGQI 72

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FF++  + ++    D        + +N
Sbjct: 73  FFIFFGLPALGLRMDPFTAALVALTIN 99


>gi|293397297|ref|ZP_06641569.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
 gi|291420215|gb|EFE93472.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
          Length = 292

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + V ++++   +      L R    +   A+
Sbjct: 52  NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSVCAWIIAFFVGSLFGIL-RTVPNRFLAAI 110

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              Y+  F    +P +V     Y +      P +G +           F+S  I L  +T
Sbjct: 111 GTAYVELF--RNVPLIVQFFTWYLVIPELLPPDIGMWFKAELDPNVQFFVSSTICLGLFT 168

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+TS+ LNL+KN
Sbjct: 169 AARVCEQVRAAIQSLPRGQQAAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKN 228

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +  K+ L
Sbjct: 229 SAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIGINAVIMLVMRVVERKVQL 285



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A  +G+L G 
Sbjct: 49  IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSVCAWIIAFFVGSLFGI 98

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R   N+ +A I   YVE+FRN+P +V  F  Y  +  +LP 
Sbjct: 99  LRTVPNRFLAAIGTAYVELFRNVPLIVQFFTWYLVIPELLPP 140


>gi|242241101|ref|YP_002989282.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133158|gb|ACS87460.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 362

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 69/340 (20%), Positives = 132/340 (38%), Gaps = 54/340 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R   +   G+ P         A+++  ++         I       L   GR  
Sbjct: 72  WVFIHARFS-QFMYGLYPREEIWRINFALVLALIS---------ILPMFWRALPHRGR-- 119

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+  + PL+  + L+     +  +                     T
Sbjct: 120 -----------YIAVWCVVYPLLAWWLLFGGFGGLPRVETRQ-------------WGGLT 155

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L      R  +    ++L +++I  +    L T++ ++ 
Sbjct: 156 LTIIIAAIGIAGALPLGILLAL-----GRRSNMPILRSLCVIFIEFWRGVPLITVLFMS- 209

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 210 ---------SVMLPLFLTEGTNIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 260

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            AL L + +   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 261 QALALGYWRMQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSIQQATVDP 320

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G + E  +    +Y      ++ +   L  +     K
Sbjct: 321 TWLGMSTEGYVFAAILYWIFCFSMSRYSQHLEKRFDTGHK 360


>gi|220904829|ref|YP_002480141.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869128|gb|ACL49463.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 225

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +L F   +  + L      +    KI + S +LG+VL      ++R       + L   Y
Sbjct: 1   MLDFDWSIIEQSLPLLQKGILVTLKITITSIILGMVLGTLL-AVARISIYAPLRWLAAAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L   + +    N    + +    +S  +A + + AA+ +E
Sbjct: 60  VNCFRSIP---LVMVLLWFYLIVPQFLTKFLNLSPLTDIR--LVSAMVAFTAFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V RGQ  AA+ALG+T  +    V+LPQA R + P L +Q + L ++++L   
Sbjct: 115 IIRAGMNSVSRGQNYAALALGMTKSQTLIYVILPQAFRVMTPLLLTQGVILFQDTALVYI 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G AD       I   TG  IE++L     Y  +   ++L +  +  ++ L
Sbjct: 175 IGLADFFRTATNIGKTTGYEIEMVLFAGAGYFVVCFCVSLAVTVVKKRLKL 225



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 34/67 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +  + +I   ++GTL+   R+S    + W+   YV  FR+IP ++V+ + 
Sbjct: 16  LQKGILVTLKITITSIILGMVLGTLLAVARISIYAPLRWLAAAYVNCFRSIPLVMVLLWF 75

Query: 149 YKSVLSV 155
           Y  V   
Sbjct: 76  YLIVPQF 82


>gi|150378347|ref|YP_001314941.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150032894|gb|ABR65008.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 384

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 119/306 (38%), Gaps = 21/306 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   L      A +  ++V +   +P L+           +L   
Sbjct: 92  ACWAFVNAKFAQFLFGRYPLDERWRPALVGILFVLLL--VPMLIPRIPYKGLNALLLLGA 149

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +                T          V SFV GI +SL       L R  +    
Sbjct: 150 LPVLAAILLPGGWFGLTYVETPLWGGLMVTLVLSFV-GIAVSLPLGILLALGRRSNMPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L   +I       L T VL      L    P    F+         +F+   I +S +
Sbjct: 209 KMLCTAFIEVIRGVPLIT-VLFMASVMLPLFLPQGVTFD---------KFLRALIGVSLF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+P+GQ E A +LGL++ +    ++LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMGFIVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     + T        +  ++   F++      ++ +   +   
Sbjct: 319 DTSLVSIIGMFDLLGIVRLNFSDTNWASAVTPLTGLIFAGFVFWLFCFGMSRYSGFMERL 378

Query: 392 IALKEK 397
           +   ++
Sbjct: 379 LDRSQR 384



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G L+  GR S   ++  +C  ++EV R +P + V+F  
Sbjct: 172 LWGGLMVTLVLSFVGIAVSLPLGILLALGRRSNMPVIKMLCTAFIEVIRGVPLITVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPQ 241


>gi|328956870|ref|YP_004374256.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp.
           17-4]
 gi|328673194|gb|AEB29240.1| glutamine ABC transporter permease protein GlnM [Carnobacterium sp.
           17-4]
          Length = 215

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 114/219 (52%), Gaps = 18/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +     T+ ++     FS ++G ++++     S+   +K  K L   Y+  F    L  +
Sbjct: 13  IDGFLNTLYSSIIALFFSLIIGTLMAI-----SQLSKKKWLKRLANAYVEFFKNIPLLII 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V+        +    L  F+  G       F +  I L+ YT+AFIAE VR+G++ VP+G
Sbjct: 68  VMFF------YVVVPLYWFSIDG-------FTAGTIGLTIYTSAFIAETVRAGIMGVPKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA ++ GLT  +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+  G  
Sbjct: 115 QTEAGLSTGLTQNETMRYIILPQAFKIVIPPLGNQFINLVKNSSVLAMVTGLDLMYQGDL 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++T    +  ++   IYL +++ +   M+ +  ++ +
Sbjct: 175 IASETFNTFDTYILIGLIYLIITLPLTYLMSYIERRLNV 213



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 44/93 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++ GF+NT + +   +  + IIGTL+   +LS  K +  +   YVE F+NIP L+
Sbjct: 7   TYQDVLIDGFLNTLYSSIIALFFSLIIGTLMAISQLSKKKWLKRLANAYVEFFKNIPLLI 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           ++ F Y  V       D       G+ +     
Sbjct: 67  IVMFFYVVVPLYWFSIDGFTAGTIGLTIYTSAF 99


>gi|293365295|ref|ZP_06612012.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|291316745|gb|EFE57181.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
          Length = 210

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+  ++T+   A + +FS  LGIV++            +      L+ +  +++ G P L
Sbjct: 9   LNGASMTLQVFALVLIFSIPLGIVVAFA-------LQVRWEPLHYLIDLYIWVMRGTPLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +P+G
Sbjct: 62  LQLIFIYYV-----------LPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIETIPKG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 111 QYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASRT 170

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL +  ++ +   RL  K +   
Sbjct: 171 AANRDASLVPMFL-AGAIYLIMIGLVTIVAKRLEKKYSYYR 210


>gi|260777098|ref|ZP_05885992.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260606764|gb|EEX33038.1| amino acid ABC transporter permease protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 304

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 19/263 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFL---NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           F      S+           F +     ++  L +    + +  ++ V+  +L + L   
Sbjct: 35  FWLYQRASIGVNYTWRWSEAFTLIFTSRSDGSLPYFIQGVISTLRLSVWGMLLALTLGTL 94

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG----------- 252
              ++RH      ++L  +YI           V I   +  +   P +G           
Sbjct: 95  IG-VARHSSIYVFRSLANVYIQLIRNIPPLVFVFIFYFFISNQLIPAIGLEGVLRENSGD 153

Query: 253 ----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
               Q    G  ++    +S  + +   ++A++AEIVRSGL  + +GQ EAA ALGL+  
Sbjct: 154 ANALQSMLFGPKSLWENLLSGVLCVGILSSAYVAEIVRSGLAGIAKGQWEAADALGLSTW 213

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              RLV+ PQ + +I P L  Q ++L+K++S+   +   ++  VG  + N +G   EI L
Sbjct: 214 AKYRLVIAPQVLAAITPALAGQAISLVKDTSIVSLISIQEMTFVGTEMANSSGLIFEIWL 273

Query: 369 IWMFIYLSLSIMIALFMNRLNAK 391
           I    YL   + ++    RL   
Sbjct: 274 IVGATYLIFCLTLSALFKRLERH 296



 Score = 56.5 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 59  LGIGFLSERAGFEIDQG--------IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110
            G  +L +RA   ++          ++  +         + G ++T  L+  GM+ A  +
Sbjct: 33  FGF-WLYQRASIGVNYTWRWSEAFTLIFTSRSDGSLPYFIQGVISTLRLSVWGMLLALTL 91

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           GTL+G  R S+  +   +  VY+++ RNIPPL
Sbjct: 92  GTLIGVARHSSIYVFRSLANVYIQLIRNIPPL 123


>gi|260550887|ref|ZP_05825093.1| histidine transport system permease hisM [Acinetobacter sp.
           RUH2624]
 gi|260406014|gb|EEW99500.1| histidine transport system permease hisM [Acinetobacter sp.
           RUH2624]
          Length = 237

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 88/220 (40%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G VL++    L+R       +    +++ T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFVLAVPL-SLARVSENIWLRGP--VWLFTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + +   +  +          +A +  T A+  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYVHEHQTLD-AFFREGINCTILAFALNTGAYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFSAFGIAAVLYAVLAFILIWIFRKLEKR 227


>gi|228477605|ref|ZP_04062238.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
 gi|228250749|gb|EEK09947.1| ABC transporter, permease protein [Streptococcus salivarius SK126]
          Length = 213

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T+     + V S  LGIVL+            K    L  LY+
Sbjct: 1   MSYVLEVLPALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQ-----IKFKPLNWLLTLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                 V     +  +A +   AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYYV-----------LPSVGIVFDRLPAAILAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+    T  N+    +  + +   IYL L  ++ +    +  K 
Sbjct: 163 GVGDLLLESRTAANRDA-TLAPMFVAGAIYLILVGVVTVASKHIEKKF 209



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T  + F  ++ +  +G ++        K + W+  +YV + R  P L+ + F
Sbjct: 10  ALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQIKFKPLNWLLTLYVWIMRGTPLLLQLIF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  + SV  + D          LN              A 
Sbjct: 70  VYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAI 110


>gi|315181507|gb|ADT88420.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii NCTC 11218]
          Length = 222

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 15/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L      + T  ++ + S V G++L       ++    K  K +   YI   +I   P
Sbjct: 12  PYLPQFVAGLGTTVELTIISTVGGLLLGTL-CAGAKTSQAKWLKFVCTCYIE--VIRNTP 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V +   +   F  P L              + +  IA+     A+ AEI+R+G+ A P
Sbjct: 69  FIVQLFFIF---FGLPAL--------GIKLSAWQAGVIAMVINLGAYSAEIIRAGIEATP 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA   LGLT  +    +++P A + + P L SQ + ++  S++   +   DL    
Sbjct: 118 KGQWEAGKTLGLTRMQIFTRIVIPPAYQRVYPALVSQCIIVMLGSAVVSQISVEDLTFAA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + +++  + E  ++   IYL L+I++         ++A K
Sbjct: 178 NFVQSRSFLSFESYMLTAAIYLVLAIVMRQMF-AFAKRVAFK 218



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 42/96 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  + Y    + G   T  L     +   ++GTL    + S  K + ++C  Y+EV 
Sbjct: 5   LDFSGLTPYLPQFVAGLGTTVELTIISTVGGLLLGTLCAGAKTSQAKWLKFVCTCYIEVI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF++  + ++             M +N
Sbjct: 65  RNTPFIVQLFFIFFGLPALGIKLSAWQAGVIAMVIN 100


>gi|283784628|ref|YP_003364493.1| arginine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282948082|emb|CBG87647.1| arginine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 222

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S V+ ++LSL  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIVVALILSLIFTII---LTLKTPGVVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPVLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGVIYLIVNGLLTLMMRLIERKALAFERR 221



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + ++ A I+  +           V W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIVVALILSLIFTIILTLKTPGVVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPVLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|291296961|ref|YP_003508359.1| polar amino acid ABC transporter inner membrane subunit
           [Meiothermus ruber DSM 1279]
 gi|290471920|gb|ADD29339.1| polar amino acid ABC transporter, inner membrane subunit
           [Meiothermus ruber DSM 1279]
          Length = 367

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 108/233 (46%), Gaps = 8/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + L              N  IF+F+ V  ++  L    +++    K  +  P+ +I+
Sbjct: 141 FFQLELIRNSFGLILQAFWVNVVIFLFAGVFSLIWGLVV-AIAKLLPGKPAQ--PIRFIA 197

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           TF      +L  I + Y + F  P+      IG     P      +AL+    A++AE+ 
Sbjct: 198 TFYTDAFLSLPSIIVIYLIGFGLPL----TGIGFFRNLPLEALAVLALTLTYGAYMAEVY 253

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL ++   Q  AA +LGL++ +  R V++PQA+R IIPPL + ++ + K+++L   VG
Sbjct: 254 RAGLESIHPSQWAAARSLGLSYGQTLRFVVVPQAVRRIIPPLLNNFIGMQKDTALVNVVG 313

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D  +    I +     +  +     +++ ++I     ++RL  +   + ++
Sbjct: 314 VIDAFNQARIIASNDFN-LSAVTTVAILFILITIPQTRLVDRLVERDRARFRQ 365


>gi|330502656|ref|YP_004379525.1| arginine/ornithine ABC transporter permease [Pseudomonas mendocina
           NK-01]
 gi|328916942|gb|AEB57773.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           mendocina NK-01]
          Length = 229

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 2/225 (0%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLP 233
            L    LT+   A + V   +L + +++    L   F     K L L+      +I G+P
Sbjct: 1   MLQGYGLTILDGAWLTVQLALLSMAVAVALGLLGAAFRLSPVKWLALMGETYATVIRGIP 60

Query: 234 TLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            LVLI L +    D    +              F++    L     A+++E  R   +A+
Sbjct: 61  ELVLILLIFFGGQDLVNRIAPLLGHEDYIDINPFVAGVGTLGFIYGAYLSETFRGAFMAI 120

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA +A G++  +    +L+PQ +R  IP +T+ +L L+K ++L   VG  D+++ 
Sbjct: 121 PKGQGEAGMAYGMSPLRVFLRILVPQMIRMAIPGITNNWLVLVKATALISLVGLQDMMAR 180

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +  + T +    IL+   +YL+++ +  L +  +  + ++  K
Sbjct: 181 AKSAGDATREPFIYILLVAAVYLAITSVSLLVLRYIERRYSVGVK 225



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 37/90 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA   M  A  +G L  A RLS  K +A +   Y  V R IP LV+
Sbjct: 5   YGLTILDGAWLTVQLALLSMAVAVALGLLGAAFRLSPVKWLALMGETYATVIRGIPELVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           I  ++     ++      +     + +N  
Sbjct: 65  ILLIFFGGQDLVNRIAPLLGHEDYIDINPF 94


>gi|325063883|gb|ADY67573.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 216

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 5/159 (3%)

Query: 244 LHFDKPVLGQFNFIGGST-----VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           +    P+L Q   +             ++++ IA + + +AF+ EI R G+ AVP+GQ E
Sbjct: 58  IFQGTPLLMQLFVVYYGVALAGLNVDAWIAVAIAFTLHASAFLGEIWRGGIQAVPKGQTE 117

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGL +    + V+LPQA +  +P      + L+K +SLA  VGF +L   G  + N
Sbjct: 118 AANALGLHYLSRMKDVVLPQAFKISLPATIGFLVQLIKGTSLAAIVGFVELSRAGQIVSN 177

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           QT + + +  I   +Y  +   ++L+   +  ++    +
Sbjct: 178 QTFRPLTVFAIVGIMYFLICWPLSLWGASVEKRMQAASR 216


>gi|315929979|gb|EFV09130.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 247

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 118/253 (46%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V  +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVASYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++      R    KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAIL-----RFSKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIFA------------ 113

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                   +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 114 --FIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 30/70 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +   R S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFSLAILRFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVLSV 155
                 + + 
Sbjct: 105 MIFAFVIFAF 114


>gi|315612885|ref|ZP_07887796.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315314995|gb|EFU63036.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 266

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PL       + G P LV + L Y       K +  Q+         P  +   +A +   
Sbjct: 75  PLQAFFVSFLKGTPILVQLMLTYYGIPLLLKAINQQWGTGLNINAIPAALFAIVAFAFNE 134

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SLA + G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 195 TSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|239834034|ref|ZP_04682362.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822097|gb|EEQ93666.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 240

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 101/232 (43%), Gaps = 14/232 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           P  S +  F        +    +      ++   + VLG+++S+    + +    K  + 
Sbjct: 14  PGGSALYNFNFAPVFASMDKLLVGAWQTIELSCAAMVLGLIVSII-CAVGKTSGPKPVRF 72

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +   YI   +I   P LV I   +           F             +  +AL     
Sbjct: 73  VIDAYIE--IIRNTPFLVQIFFIF-----------FGLPSAGLRLSPNSAALLALIVNFG 119

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+R+G+ ++ +GQ+EA  ALGL+  +  R V++  A+R++ P LTSQ++ L+  S
Sbjct: 120 AYGTEIIRAGIESIHKGQVEAGTALGLSRLQVFRYVIMKPALRTVYPSLTSQFIYLMLTS 179

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           S+   +   +L + G  + + T  + E+ ++   +YL +SI  +     +  
Sbjct: 180 SVVSVISANELAAAGNDLQSATFASFEVYIVITLMYLVMSIGFSAVFALIEK 231



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  L+ + M+   I+  +   G+ S  K V ++   Y+E+ RN P LV IFF+
Sbjct: 34  LLVGAWQTIELSCAAMVLGLIVSIICAVGKTSGPKPVRFVIDAYIEIIRNTPFLVQIFFI 93

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + S       +      + +N 
Sbjct: 94  FFGLPSAGLRLSPNSAALLALIVNF 118


>gi|123441654|ref|YP_001005638.1| histidine transport system permease protein HisQ [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088615|emb|CAL11410.1| histidine transport system permease protein HisQ [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 228

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S ++G++ +      +R           L    T LI G+P LVL+ L +  
Sbjct: 19  LALCSVLLSVIIGLIGAGGKLSSNRLLSG-------LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AVP GQ+EAA A G
Sbjct: 72  LQIVLNSITESLGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPTGQIEAARAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FSSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGVVYLIFTTLSNGILLWLERRYSHGVKR 225


>gi|194434439|ref|ZP_03066700.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Shigella dysenteriae 1012]
 gi|194417290|gb|EDX33398.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Shigella dysenteriae 1012]
 gi|332096803|gb|EGJ01793.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           dysenteriae 155-74]
          Length = 224

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIKSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIDERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|148976101|ref|ZP_01812844.1| arginine transporter permease subunit ArtQ [Vibrionales bacterium
           SWAT-3]
 gi|145964496|gb|EDK29750.1| arginine transporter permease subunit ArtQ [Vibrionales bacterium
           SWAT-3]
          Length = 228

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 90/179 (50%), Gaps = 1/179 (0%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + + + + +T  +  +  L  I +   ++F       F   G       F+S  +ALS  
Sbjct: 42  RRIAIKWPTTAFVTIVRGLPEILVVLFIYFGS-TQVLFMITGDFIEVSPFLSGVVALSLI 100

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            A++ ++ +R  L AV +GQ EAA ALG+   +A   ++LPQA+R  +P LT+Q+L LLK
Sbjct: 101 FASYASQTIRGALKAVSKGQREAASALGIPQSRAFFRIVLPQAVRHALPGLTNQWLVLLK 160

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++L   +G  DL+         T +A         IYL ++++    +  ++ K +++
Sbjct: 161 DTALVSLIGATDLLKQAQLTSAATHEAFTWYATAAAIYLIITLITQRAVKVIDGKFSIQ 219


>gi|59712193|ref|YP_204969.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio
           fischeri ES114]
 gi|59480294|gb|AAW86081.1| histidine/lysine/arginine/ornithine transporter subunit [Vibrio
           fischeri ES114]
          Length = 246

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 87/211 (41%), Gaps = 10/211 (4%)

Query: 197 GIVLSLFATRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHF 246
           G +  +   R +R     +    + +P L +   L FG   L+   L          +  
Sbjct: 36  GALAKMAPYRWARSIATLYTTIVRGIPDLVLMMLLFFGGQMLLNNGLYASNEWINEWMTN 95

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P     +++        F++  + +     A++AE  R  ++AV RG+MEAA A G++
Sbjct: 96  SNPDHEWISYLPDYIEISPFIAGVLTIGFIFGAYMAETFRGAIMAVDRGEMEAAKAYGMS 155

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              A R +L PQ +R  +P   + +L LLK ++L   +G  D+V V       T      
Sbjct: 156 GMMAFRRILFPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRVSSMAAGTTKMPFTF 215

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +    I+L  + +    +  +  K ++  +
Sbjct: 216 YMTVACIFLFFTAVSTGALKLIERKFSIHMR 246


>gi|315613064|ref|ZP_07887975.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315315174|gb|EFU63215.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 213

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +    L+  ++T+   A + +FS  LGIV++       +  H        L+ +
Sbjct: 1   MSYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFALQVRWKPLHY-------LIDL 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                       +  IA     AA+ AEI
Sbjct: 54  YIWVMRGTPLLLQLIFIYYV-----------LPSIGIRLDRLPAAVIAFVLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+  +P+GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+
Sbjct: 103 FRGGIETIPKGQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +DL+    T  N+    + + L    IYL +  ++ +   +L  K +   
Sbjct: 163 GISDLILASRTAANRDASLVPMFL-AGAIYLIMIGIVTIVAKKLEKKYSYYR 213



 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 4/94 (4%)

Query: 84  SYATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           SY   IL   +N    T  +    +I +  +G +V        K + ++  +Y+ V R  
Sbjct: 2   SYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFALQVRWKPLHYLIDLYIWVMRGT 61

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           P L+ + F+Y  + S+    D          LN 
Sbjct: 62  PLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNY 95


>gi|297202813|ref|ZP_06920210.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|297148210|gb|EFH28892.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 304

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 107/254 (42%), Gaps = 16/254 (6%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
            +   K         +       G       L     T+   A   V +  LG V  +  
Sbjct: 33  WWVWQKMDDKNQLEWNLWEPFTTGEAWTTYLLPGLGNTLKAAAISMVIALPLGAVFGI-- 90

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
              +R       + +    +  F    +  L+L A ++ +               S+   
Sbjct: 91  ---ARMSDHAWVRGVAGTVVEFFRAIPVLLLMLFANEFYV----------RSSDISSEQR 137

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              ++   L  Y A+ +AEIVR+G++++PRGQ EAA A+GL   +    +LLPQA+ +++
Sbjct: 138 PLYAVVTGLVLYNASVLAEIVRAGILSLPRGQTEAAYAVGLRKGQTMTSILLPQAVTAML 197

Query: 325 PPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           P + SQ + ++K+++L    + F +L++   T+       I   ++   I++ L+ ++  
Sbjct: 198 PAIVSQLVVIVKDTALGGVMLSFPELLNSRSTLAANYANVIPSFIVVGIIFIVLNFLLTS 257

Query: 384 FMNRLNAKIALKEK 397
           F + L  ++   +K
Sbjct: 258 FASWLEQRLRRSKK 271



 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 39/78 (50%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+T+  ++ T +L G  NT   A   M+ A  +G + G  R+S +  V  +    VE FR
Sbjct: 52  PFTTGEAWTTYLLPGLGNTLKAAAISMVIALPLGAVFGIARMSDHAWVRGVAGTVVEFFR 111

Query: 138 NIPPLVVIFFLYKSVLSV 155
            IP L+++ F  +  +  
Sbjct: 112 AIPVLLLMLFANEFYVRS 129


>gi|260554426|ref|ZP_05826647.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
 gi|260410968|gb|EEX04265.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter baumannii ATCC 19606]
          Length = 237

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 88/220 (40%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G VL++    L+R       +    +++ T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFVLAVPL-SLARVSENIWLRGP--VWLFTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + +   +  +          +A +  T A+  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYVHEHQTLD-AFFREGINCTILAFALNTGAYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFSAFGIAALLYAVLAFILIWIFRKLEKR 227


>gi|259907902|ref|YP_002648258.1| Histidine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|224963524|emb|CAX55014.1| Histidine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283477779|emb|CAY73695.1| Histidine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 228

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 VF+ +LG++ +      +R  + +    +  +Y  T LI G+P LVL+ L +  
Sbjct: 19  LALSSVVFAVILGLIGA-----GARLSNRRPLAVISEVY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F          ++  I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 72  LQIALNQVTDFFGFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWMAVPKGQVEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTRSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  +  +  K+
Sbjct: 192 WFAIVAGIIYLIFTTLSNGVLWWLERRYTVGVKR 225



 Score = 44.2 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 36/68 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I  G + T  LA S ++ A I+G +    RLS  + +A I  VY  + R +P LV+
Sbjct: 5   YSEVIFKGALVTLELALSSVVFAVILGLIGAGARLSNRRPLAVISEVYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|194292632|ref|YP_002008539.1| ABC transporter, permease protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193226536|emb|CAQ72487.1| putative ABC transporter, permease protein [Cupriavidus taiwanensis
           LMG 19424]
          Length = 270

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 11/222 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +  N +I VF+  LG V+ L    LS   H    +     ++  F    +
Sbjct: 53  WTWTPALLRGLLANIEISVFAMALGTVVGLVIGALSLSSH-AALRVFTRTWVQAFRNAPV 111

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV             V   F F       P+++ + + L+   +A +AEI R  + ++
Sbjct: 112 LVLVYFTTYVFPFELHLVHWTFPF-------PDWVKVVLGLALPASANVAEIFRGAIQSI 164

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q EAA +L L  R+  RLV+LPQ +R ++PP  + Y ++  ++SLA  VG  D+V  
Sbjct: 165 PSAQWEAAQSLALRRRQIFRLVVLPQCLRRMLPPWMNLYASITMSTSLASLVGVHDVVDT 224

Query: 353 GGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                N   +T   I +    + ++ +    IA     L  +
Sbjct: 225 AQVASNTVARTDFTILVYFTLLVLFFAYCYPIARATRALERR 266



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 43/97 (44%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
                   S  ++  A+L G +    ++   M   T++G ++GA  LS++  +    R +
Sbjct: 43  GSTPAAVRSLWTWTPALLRGLLANIEISVFAMALGTVVGLVIGALSLSSHAALRVFTRTW 102

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V+ FRN P LV+++F        L +   +   P  +
Sbjct: 103 VQAFRNAPVLVLVYFTTYVFPFELHLVHWTFPFPDWV 139


>gi|148546353|ref|YP_001266455.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|148510411|gb|ABQ77271.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
          Length = 223

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 7/230 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          L      M    K+ V   + GIVL      L R    K    L   Y+
Sbjct: 1   MEMDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTIL-ALMRLSSSKLLSNLAGAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F      ++ L+ +    +   P + ++   G  T    F S  +A   + AA+  EI
Sbjct: 60  NYFR-----SIPLLLVITWFYLAVPFVLRW-ITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+ ++ +GQM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   V
Sbjct: 114 VRAGVQSISKGQMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D ++   +  +  G++ E ++    +Y  +S   +  + RL  +I +
Sbjct: 174 GLVDFLNSARSNGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRITV 223



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++       A+  G V T  L   G+I   ++GT++   RLS++KL++ +   YV  F
Sbjct: 3   MDFSEIIPALPALWEGMVMTLKLMVMGVIGGIVLGTILALMRLSSSKLLSNLAGAYVNYF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R+IP L+VI + Y +V  VL                               
Sbjct: 63  RSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113


>gi|227358520|ref|ZP_03842845.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
 gi|227161231|gb|EEI46305.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Proteus mirabilis ATCC
           29906]
          Length = 264

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 18/261 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIV 199
           P  + F   + +             PFG       L          +   ++ +F++G  
Sbjct: 8   PCPIFFTGGEIMSIDWDWGIFFQEAPFGNTTYLGWLISGFQVTVALSLCAWIIAFIVGSF 67

Query: 200 LSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             +  T  +R        + +  + +PL+         +P L+  A+      D     Q
Sbjct: 68  FGILRTVPNRLLSSLGAIYVELFRNVPLIVQFFTWYLVIPELLPQAIGDWFKMDLTPNIQ 127

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F           F+S  + L  +TAA + E VR+ + ++PRGQ  A +ALGLT  +  R 
Sbjct: 128 F-----------FVSSALCLGLFTAARMCEQVRAAINSLPRGQKAAGLALGLTLPQTYRY 176

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           VLLP A R IIPP+TS+ LNL+KNS++A  +G  D+ +    +++ + +A E        
Sbjct: 177 VLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLIDMAAQANKLLDYSAKAYESFTAITLA 236

Query: 374 YLSLSIMIALFMNRLNAKIAL 394
           Y+ ++++I L M+ L  ++ L
Sbjct: 237 YVFINVIIMLIMHWLEKRVRL 257



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 10/111 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   ++ GF  T  L+    I A I+G+  G 
Sbjct: 21  IDWDWGIFFQEAPFG----------NTTYLGWLISGFQVTVALSLCAWIIAFIVGSFFGI 70

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            R   N+L++ +  +YVE+FRN+P +V  F  Y  +  +LP          
Sbjct: 71  LRTVPNRLLSSLGAIYVELFRNVPLIVQFFTWYLVIPELLPQAIGDWFKMD 121


>gi|218709551|ref|YP_002417172.1| arginine transporter permease subunit ArtM [Vibrio splendidus
           LGP32]
 gi|218322570|emb|CAV18729.1| ABC transporter: transmembrane protein; Arginine uptake [Vibrio
           splendidus LGP32]
          Length = 222

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + LS     + T+ ++   S ++G +LSL  T        +      L      L  
Sbjct: 1   MNQQYLSQMLEGLVTSLQLTGASLLVGCILSLLMTV---TLILRIPAIHWLTRGIITLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +      + +S  +    +AL+  TAA+   + R    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDWIRESFL--WTWLSQPWFCAMLALALNTAAYSTLLFRGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EA  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPAGQWEACRALGMDKIATL-KVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKK 215


>gi|161507109|ref|YP_001577063.1| glutamine ABC transporter membrane protein [Lactobacillus
           helveticus DPC 4571]
 gi|160348098|gb|ABX26772.1| Glutamine ABC transporter (membrane protein) [Lactobacillus
           helveticus DPC 4571]
          Length = 217

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +      SFV+G++L L      ++     G          F+I  +  L
Sbjct: 17  LQGLWVTIYVSLISIALSFVVGLILGLIRYTKIKYVSAIVG----------FIIDIIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P L          V+    +   AL  +  A +AEIVRSG+ +V  G
Sbjct: 67  PLLLIIFFTYFGLPQL--------GIVTNPTTASIAALVIFEGAMLAEIVRSGIGSVDPG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QME A + G+++ +A   V++PQA+  +IP L +Q+++L+K++SLA  +   +L+     
Sbjct: 119 QMEGARSNGMSYGQAMYHVVMPQALNHMIPALLAQFVSLVKDTSLATIIVLPELLYNAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I +Q T   I + +I   +Y  +   ++   N L  K 
Sbjct: 179 IYSQNTTYLIPMYVIIAIMYFVVCFCLSTIANYLQKKY 216



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 37/71 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T +++   +  + ++G ++G  R +  K V+ I    +++ RN+P L++IF
Sbjct: 14  RFLLQGLWVTIYVSLISIALSFVVGLILGLIRYTKIKYVSAIVGFIIDIIRNLPLLLIIF 73

Query: 147 FLYKSVLSVLP 157
           F Y  +  +  
Sbjct: 74  FTYFGLPQLGI 84


>gi|183597012|ref|ZP_02958505.1| hypothetical protein PROSTU_00244 [Providencia stuartii ATCC 25827]
 gi|188023668|gb|EDU61708.1| hypothetical protein PROSTU_00244 [Providencia stuartii ATCC 25827]
          Length = 250

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 14/233 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL    L +          I + + +   +L       +R       + +  +Y+S F  
Sbjct: 15  FLAPEYLEWFGYGFLLTLWISICTIIAATLLGFVVAA-ARDSQIAPLRWIVGVYVSVF-- 71

Query: 230 FGLPTLVLIALKYQL-----------HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              P LV +   Y               + P    F  +  S  S EF++ +I L+ YT 
Sbjct: 72  RNTPLLVQLFFWYFASGEILSSDMMAWLNTPHEITFAGMALSWPSFEFLAGFIGLTLYTV 131

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            FIAE +RSG+  V +GQ  AA ALGLT  +A + V+LPQA++  +PPL  QY+N++KNS
Sbjct: 132 PFIAEEIRSGIRGVRQGQKYAAFALGLTGWQAMKHVVLPQAVKIAMPPLLGQYMNVVKNS 191

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SL +A+G A+L  V   + +QT Q      +   +Y+++  ++  +      +
Sbjct: 192 SLTMAIGVAELSYVSRQVESQTLQTFTAFGLATVLYIAIIAVMEGWGQWRAQR 244



 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 3/165 (1%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            + +  +     Y      GF+ T W++   +I AT++G +V A R S    + WI  VY
Sbjct: 8   GEFLSEHFLAPEYLEWFGYGFLLTLWISICTIIAATLLGFVVAAARDSQIAPLRWIVGVY 67

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V VFRN P LV +FF Y +   +L      ++                            
Sbjct: 68  VSVFRNTPLLVQLFFWYFASGEIL---SSDMMAWLNTPHEITFAGMALSWPSFEFLAGFI 124

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
              L  V  +     S     + G+      +       +  +VL
Sbjct: 125 GLTLYTVPFIAEEIRSGIRGVRQGQKYAAFALGLTGWQAMKHVVL 169


>gi|320178443|gb|EFW53411.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella boydii ATCC 9905]
 gi|332094325|gb|EGI99376.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           boydii 5216-82]
          Length = 224

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIKSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|224368337|ref|YP_002602500.1| ABC-type arginine/histidine transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223691053|gb|ACN14336.1| ABC-type arginine/histidine transport system, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 230

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 10/210 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + V+ I+L L A  L +    K+   +   Y  T +I G+P LVLI L Y   +  P L 
Sbjct: 25  AMVITILLGLGA-ALCKLSSIKSLGIIAETY--TTVIRGIPELVLILLVY---YGAPTLI 78

Query: 253 Q----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           Q    F            ++  + +     AF  E+ R   +AVP+GQ+EAA A G+   
Sbjct: 79  QDMAAFFGQEIYVEIKPMVAGILTIGFIYGAFATEVFRGAFLAVPKGQIEAAQACGMGPL 138

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R +LLPQ  R  IP L + ++ L+K ++L   +   +L+           +      
Sbjct: 139 LVFRRILLPQMWRFAIPGLGNVWMVLIKATALVSVIQLPELMRSTDIAARNLHKPFTCYF 198

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               IYL+++I    F      K     ++
Sbjct: 199 AASLIYLAITIFSLFFQQWAERKANRGVRR 228



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   T  +    M+   ++G      +LS+ K +  I   Y  V R IP LV+
Sbjct: 7   YGPLLIKGAKLTITVGAGAMVITILLGLGAALCKLSSIKSLGIIAETYTTVIRGIPELVL 66

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           I  +Y    +++       
Sbjct: 67  ILLVYYGAPTLIQDMAAFF 85


>gi|222085838|ref|YP_002544369.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
 gi|221723286|gb|ACM26442.1| general L-amino acid ABC transporter [Agrobacterium radiobacter
           K84]
          Length = 384

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 111/254 (43%), Gaps = 16/254 (6%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +L+ + +P  S  L +G F  +   +     +     +   +  + +   +    L R
Sbjct: 142 NVLLAFIVLPIMSFFLLYGGFGLDVVETQRWGGLMVTLIVSFVAIAVSVPFGIVL-ALGR 200

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                  + L +L+I       L T++ +A           +    F+       + +  
Sbjct: 201 RSQMPVIRMLCVLFIEVIRGIPLITVLFMA----------SVMLPLFLPQGWTIDKLLRA 250

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I +S +T+A++AE++R GL AVP+GQ E A +LGL + +  RL++LPQA++ +IP + +
Sbjct: 251 VIGVSIFTSAYMAEVIRGGLQAVPKGQFEGADSLGLGYWQKMRLIVLPQAIKLVIPGIVN 310

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMIALF 384
            ++ + K++SL   +   DL+ +     +    A  +     ++   F++      ++ +
Sbjct: 311 TFIGMFKDTSLISIINMFDLLGIVRQNFSDPNWASPVTPVTGLIFAGFVFWLFCFAMSRY 370

Query: 385 MNRLNAKIALKEKK 398
              +   +    K+
Sbjct: 371 SGFMERHLDTGHKR 384


>gi|330686410|gb|EGG98010.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 229

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 5/225 (2%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      +      +     + + +  +GI++      L R           ++Y S F 
Sbjct: 1   MTFIFHTIIEVLKGVPHTLAVTLIAMCVGILIG-SIFALIRLHRIPGLSQFVVIYNSFF- 58

Query: 229 IFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
               P +V + + Y     F       FN      + P  M   I  S +  A+++E ++
Sbjct: 59  -RSTPLIVQLFVFYYGVPAFILWFNTIFNTKMNPDMVPPLMIAAITFSLHATAYLSESIK 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL++V   Q+EAA  +GL++    R ++ PQA    +P + +Q++ LLK +SLA AV  
Sbjct: 118 GGLLSVDTKQIEAAQTVGLSNWNVYRRIVFPQAFGYALPNIENQFIMLLKGTSLAFAVQV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +++++   I N+  Q + +  +    Y +L+I+I L  ++L   
Sbjct: 178 TEIMAISTEIANEGYQFVPVYTVAALFYWALAIIIELIFHKLEHH 222



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 1/113 (0%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  +T  +    M    +IG++    RL     ++    +Y   FR+ P +V +F  Y
Sbjct: 12  LKGVPHTLAVTLIAMCVGILIGSIFALIRLHRIPGLSQFVVIYNSFFRSTPLIVQLFVFY 71

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
             V + +   +          +    L    +T   +A  ++   + G +LS+
Sbjct: 72  YGVPAFILWFNTIFNTKMNPDM-VPPLMIAAITFSLHATAYLSESIKGGLLSV 123


>gi|300717677|ref|YP_003742480.1| lysine/arginine/ornithine ABC transporter, permease protein
           [Erwinia billingiae Eb661]
 gi|299063513|emb|CAX60633.1| lysine/arginine/ornithine ABC transporter, permease protein
           [Erwinia billingiae Eb661]
          Length = 228

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +L ++L L     ++    +  + +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVLLSVILGLIG-AGAKLSSNRALRLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVPRGQ+EAA A G
Sbjct: 72  LQIALNQLTDALGVDQFDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPRGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTSSQTFRRILFPGMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  ++
Sbjct: 192 YFAVVAGVIYLVFTTLSNGVLLWLERRYSVGVRR 225


>gi|282857607|ref|ZP_06266826.1| L-cystine transport system permease protein TcyL [Pyramidobacter
           piscolens W5455]
 gi|282584557|gb|EFB89906.1| L-cystine transport system permease protein TcyL [Pyramidobacter
           piscolens W5455]
          Length = 221

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 11/208 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A+I   S    +VLS     + R++           +++ F         L+   + +
Sbjct: 21  LTAEIAALSLAGTLVLSTVI-AIVRYYKFPLLTQFFDAFVTVFRATP-----LVVALFMI 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L     I        F +  ++L C T+AF+AE  R+ L +V +GQ+EA  ++G
Sbjct: 75  FFALPCL-----IPALKAMTPFQATVVSLICNTSAFMAESFRAALESVDKGQIEACYSMG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +A R  +LPQA     P + + ++ ++K ++L   VG AD++         + +  
Sbjct: 130 MTRAQAMRRAILPQAFVVAAPSIGNHFIGIIKGTALGFTVGLADVMGTAKMEAALSLRFF 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           E  L    +Y+++ +++  F+ R+  ++
Sbjct: 190 EAYLCVTIVYVAIVLIVEFFLRRIERRL 217


>gi|160896813|ref|YP_001562395.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160362397|gb|ABX34010.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 223

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 19/236 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                     +N  L     ++       +   + G VL+L      R   +K       
Sbjct: 6   DWSFFTWDLFSNFVLKGLYFSLTLTVIATIGGVLFGTVLALM-----RLSGKKWLDVPAT 60

Query: 222 LYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LY++      L   ++   L   L   +P+  +             +S  I    + AA+
Sbjct: 61  LYVNGMRSVPLVMVILWFFLLMPLIIGRPIGAE-------------VSAIITFIAFEAAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI+R+G+ ++PRGQ+ A  A+G+T+ +  RLV+LPQA R+++P L +Q + L +++SL
Sbjct: 108 FSEIMRAGIQSIPRGQVSAGQAMGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSL 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             A+G  D++          G+ IE  L     Y  L   ++  + RL+ KIA+  
Sbjct: 168 VYAIGAYDMLKGFEVAGKNYGRPIESYLAAGVTYFVLCYSLSWAVKRLHKKIAIIR 223



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 5/174 (2%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +ID     +   S++   +L G   +  L     I   + GT++   RLS  K +     
Sbjct: 4   QIDWSFFTWDLFSNF---VLKGLYFSLTLTVIATIGGVLFGTVLALMRLSGKKWLDVPAT 60

Query: 131 VYVEVFRNIPP--LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +YV   R++P   +++ FFL   ++   PI      +   +       S        +  
Sbjct: 61  LYVNGMRSVPLVMVILWFFLLMPLIIGRPIGAEVSAIITFIAFEAAYFSEIMRAGIQSIP 120

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
               S    + ++           +     LP+L   T ++F   +LV     Y
Sbjct: 121 RGQVSAGQAMGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAY 174


>gi|71083898|ref|YP_266618.1| octopine-like transport system permease protein oocM [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|91763031|ref|ZP_01264995.1| octopine-like transport system permease protein oocM [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|71063011|gb|AAZ22014.1| octopine-like transport system permease protein oocM [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|91717444|gb|EAS84095.1| octopine-like transport system permease protein oocM [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 224

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 5/209 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+   S ++G+ +      L  + +    K     Y  ++L  G P LV I + Y    
Sbjct: 21  LKLLSASLIIGLFIGFLFAVLRLNKNPFINKF---AYGYSYLFRGTPLLVQIFIIYY-GL 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            +    +  F+      P +    IA +  T A+ +EI+RS    +  G +EA  +LG++
Sbjct: 77  GQIEWLRSTFLWVILKEP-YWCAIIAFALNTGAYTSEILRSAFQTIKPGIIEAGKSLGIS 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            +     + +P A+R  +P   ++ + ++K +SLA  V   D+  V   I++ T + +E+
Sbjct: 136 SKIILYKIQIPVAIRQSLPAYGNEIILMMKGTSLASTVTLMDITGVAKHIVSTTYKPLEV 195

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            L+   IYL ++ +    +  L  K + +
Sbjct: 196 FLLAGGIYLFMTFIFHNLIKYLEKKYSFQ 224



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   V T  L  + +I    IG L    RL+ N  +      Y  +FR  P LV IF +
Sbjct: 13  LLSAAVITLKLLSASLIIGLFIGFLFAVLRLNKNPFINKFAYGYSYLFRGTPLLVQIFII 72

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 73  YYGLGQI 79


>gi|108810144|ref|YP_654060.1| putative amino acid transport system permease [Yersinia pestis
           Antiqua]
 gi|108814126|ref|YP_649893.1| amino acid transport system permease [Yersinia pestis Nepal516]
 gi|145601164|ref|YP_001165240.1| amino acid transport system permease [Yersinia pestis Pestoides F]
 gi|150260957|ref|ZP_01917685.1| putative amino acid transport system permease [Yersinia pestis
           CA88-4125]
 gi|162421147|ref|YP_001608459.1| polar amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926123|ref|ZP_02221955.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939983|ref|ZP_02228520.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009454|ref|ZP_02230352.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213182|ref|ZP_02239217.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401543|ref|ZP_02307037.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422872|ref|ZP_02314625.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425488|ref|ZP_02317241.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468128|ref|ZP_02332832.1| putative amino acid transport system permease [Yersinia pestis
           FV-1]
 gi|218931085|ref|YP_002348960.1| putative amino acid transport system permease [Yersinia pestis
           CO92]
 gi|229839817|ref|ZP_04459976.1| putative amino acid transport system permease [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229841902|ref|ZP_04462058.1| putative amino acid transport system permease [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229896779|ref|ZP_04511942.1| putative amino acid transport system permease [Yersinia pestis
           Pestoides A]
 gi|229904667|ref|ZP_04519778.1| putative amino acid transport system permease [Yersinia pestis
           Nepal516]
 gi|294505632|ref|YP_003569694.1| putative amino acid transport system permease [Yersinia pestis
           Z176003]
 gi|108777774|gb|ABG20293.1| amino acid transport system permease [Yersinia pestis Nepal516]
 gi|108782057|gb|ABG16115.1| putative amino acid transport system permease [Yersinia pestis
           Antiqua]
 gi|115349696|emb|CAL22677.1| putative amino acid transport system permease [Yersinia pestis
           CO92]
 gi|145212860|gb|ABP42267.1| amino acid transport system permease [Yersinia pestis Pestoides F]
 gi|149290365|gb|EDM40442.1| putative amino acid transport system permease [Yersinia pestis
           CA88-4125]
 gi|162353962|gb|ABX87910.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis Angola]
 gi|165912109|gb|EDR30749.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921983|gb|EDR39160.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991376|gb|EDR43677.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205480|gb|EDR49960.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958264|gb|EDR55285.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048925|gb|EDR60333.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055502|gb|EDR65295.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229678785|gb|EEO74890.1| putative amino acid transport system permease [Yersinia pestis
           Nepal516]
 gi|229691241|gb|EEO83294.1| putative amino acid transport system permease [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696183|gb|EEO86230.1| putative amino acid transport system permease [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229700217|gb|EEO88253.1| putative amino acid transport system permease [Yersinia pestis
           Pestoides A]
 gi|262363797|gb|ACY60518.1| putative amino acid transport system permease [Yersinia pestis
           D106004]
 gi|262367733|gb|ACY64290.1| putative amino acid transport system permease [Yersinia pestis
           D182038]
 gi|294356091|gb|ADE66432.1| putative amino acid transport system permease [Yersinia pestis
           Z176003]
 gi|320017441|gb|ADW01013.1| putative amino acid transport system permease [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 251

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   V S + G+  ++  T L        G    +L       
Sbjct: 10  WRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 MAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 224


>gi|330466433|ref|YP_004404176.1| amino acid permease [Verrucosispora maris AB-18-032]
 gi|328809404|gb|AEB43576.1| amino acid permease [Verrucosispora maris AB-18-032]
          Length = 290

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 19/263 (7%)

Query: 138 NIPPLVVIFFLYKSVLSVLPI-PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
            +  L +++++Y                           L     T+       + S   
Sbjct: 27  GVALLGLVYWIYSKFDQANQWEGWLWKPFAEPKTWTQFILPGLWATLKAAGVGMLLSLAF 86

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+ ++   RLS H       ++P   +  F       L++  + Y L +          
Sbjct: 87  GIIFAV--GRLSEHKWI----SVPAGAVVEFFRAVPLLLMIFFVFYGLPYVI-------- 132

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                    F S+ I L+ Y  + +AE  R+G+ A+P GQ EAA A+G+   +  +L+L+
Sbjct: 133 ---KQPVTAFWSVVIGLTLYNGSVLAEAFRAGIRALPGGQSEAAYAIGMRKTQVMQLILI 189

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG-GTIINQTGQAIEIILIWMFIYL 375
           PQA R+++P + SQ + LLK+++L   V + +L+  G   +    G  I   ++   IY+
Sbjct: 190 PQAARAMLPIIVSQLVVLLKDTALGYIVAYPELLQRGVNDLAANYGNIIPAAMVIAVIYI 249

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++ M+  F   L  +   +  +
Sbjct: 250 IINSMLTWFAGWLERRTGTRRAR 272



 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 22/156 (14%)

Query: 14  SRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           S    LYD      +V N  + +I  + L  +  W  +                   ++A
Sbjct: 2   STSSVLYDHPGPRAKVRNTVLSVIFGVALLGLVYWIYSK-----------------FDQA 44

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
                    P+    ++   IL G   T   A  GM+ +   G +   GRLS +K ++  
Sbjct: 45  NQWEGWLWKPFAEPKTWTQFILPGLWATLKAAGVGMLLSLAFGIIFAVGRLSEHKWISVP 104

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
               VE FR +P L++IFF++  +  V+  P  +  
Sbjct: 105 AGAVVEFFRAVPLLLMIFFVFYGLPYVIKQPVTAFW 140


>gi|294498360|ref|YP_003562060.1| putative amino acid ABC transporter permease [Bacillus megaterium
           QM B1551]
 gi|294348297|gb|ADE68626.1| putative amino acid ABC transporter, permease protein [Bacillus
           megaterium QM B1551]
          Length = 233

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 8/229 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L +  +         +   +L  +L  F   L R   +     +  +Y+S   +
Sbjct: 6   FHDWLKLLWQVVDKLPLTLFMLGLSLLFSLLLGFVIALIRIQKKPVLSKMATIYLSF--M 63

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P LV + L Y   F  P L     I           L IA S +TAA ++E++RS  
Sbjct: 64  RCTPLLVQLFLVY---FGLPQLLLLVHI-DINSWSRVTFLVIAFSLHTAAPLSEVIRSAY 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++ +GQ EAA ++G+ + ++ R ++LPQA  + +P L +  ++LLK+++LA ++G  D+
Sbjct: 120 LSIDKGQFEAAYSIGMNYFQSLRRIILPQAFVAALPNLGNATISLLKDTALAFSIGIIDI 179

Query: 350 VSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     I+         EI +    +Y S+ I+I + ++ L   +    
Sbjct: 180 MGQVRLILGNNYGIGMFEIYVTISLVYWSMCIVIEIIVSYLEKHLKKGR 228


>gi|296103389|ref|YP_003613535.1| glutamate/aspartate transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057848|gb|ADF62586.1| glutamate/aspartate transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 224

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI   + ++GIV       +      +     PL +
Sbjct: 1   MYEFDWSSIVPSMPYLLDGLVITLKITAIAIIVGIVWGTLLAVM------RLSSFKPLAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +T  +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FATAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E++L    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMVLFAGAVYFVISLSASLLVSWLKKR 222



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 36/66 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +    +I   + GTL+   RLS+ K +AW    YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITAIAIIVGIVWGTLLAVMRLSSFKPLAWFATAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|260770436|ref|ZP_05879369.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii CIP 102972]
 gi|260615774|gb|EEX40960.1| ABC polar amino acid transporter inner membrane protein [Vibrio
           furnissii CIP 102972]
          Length = 222

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 15/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L      + T  ++ + S V G++L       ++    K  K +   YI   +I   P
Sbjct: 12  PYLPQFVAGLGTTVELTIISTVGGLLLGTL-CAGAKTSQAKWLKFVCTCYIE--VIRNTP 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V +   +   F  P L              + +  IA+     A+ AEI+R+G+ A P
Sbjct: 69  FIVQLFFIF---FGLPAL--------GIKLSAWQAGVIAMVINLGAYSAEIIRAGIEATP 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EA   LGLT  +    +++P A + + P L SQ + ++  S++   +   DL    
Sbjct: 118 KGQWEAGKTLGLTRMQIFTRIVIPPAYQRVYPALVSQCIIVMLGSAVVSQISVEDLTFAA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + +++  + E  ++   IYL L+I++      +  +++ K
Sbjct: 178 NFVQSRSFLSFESYMLTAAIYLVLAIVMRQMFAFV-KRVSFK 218



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 42/96 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  + Y    + G   T  L     +   ++GTL    + S  K + ++C  Y+EV 
Sbjct: 5   LDFSGLTPYLPQFVAGLGTTVELTIISTVGGLLLGTLCAGAKTSQAKWLKFVCTCYIEVI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF++  + ++             M +N
Sbjct: 65  RNTPFIVQLFFIFFGLPALGIKLSAWQAGVIAMVIN 100


>gi|271500409|ref|YP_003333434.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343964|gb|ACZ76729.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 223

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 103/238 (43%), Gaps = 17/238 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +              L     T+       +   + G++L+       +    +  + 
Sbjct: 1   MRYQWDFSALPHWWPLLLDGLWGTVRIGFTSILIGMLTGVLLATM-----KLSSTRLWRL 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              L+I  +          I   + +++  PV+              F +   ALS  +A
Sbjct: 56  PAHLFIGFYRNTPA-----IVHFFWIYYALPVISPLTL-------SPFAAAVTALSAQSA 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF AE+ R G++++  GQ E A ALG++   A R V+LPQA+R +IPPL  +   L+K++
Sbjct: 104 AFYAEVYRGGILSIAEGQWEGAKALGMSRPLALRRVILPQALRRMIPPLIERSFELIKST 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SLA ++ + +L+     I +Q+ + +EI  +   +Y +L  +++L       +++   
Sbjct: 164 SLASSLAYGELLYQAMQINSQSFRPLEIYSLAALLYFTLLFVLSLLSQYAERRLSYAR 221



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 40/80 (50%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   +   +L G   T  + F+ ++   + G L+   +LS+ +L      +++  +R
Sbjct: 6   DFSALPHWWPLLLDGLWGTVRIGFTSILIGMLTGVLLATMKLSSTRLWRLPAHLFIGFYR 65

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
           N P +V  F++Y ++  + P
Sbjct: 66  NTPAIVHFFWIYYALPVISP 85


>gi|156934835|ref|YP_001438751.1| hypothetical protein ESA_02683 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533089|gb|ABU77915.1| hypothetical protein ESA_02683 [Cronobacter sakazakii ATCC BAA-894]
          Length = 224

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + + GIV       +      +     PL +
Sbjct: 1   MYEFDWSSIVPSMPYLLAGLVITLKITVTAVIFGIVWGTLLAVM------RLSAFKPLAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +T  +    ++ L+ +    +   P L Q             +S  +A S + AA+ +E
Sbjct: 55  FATAYVNVFRSIPLVMVLLWFYLIVPGLLQDVLGISPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSWLKKR 222



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + +I   + GTL+   RLSA K +AW    YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVIFGIVWGTLLAVMRLSAFKPLAWFATAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|330957139|gb|EGH57399.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 215

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 13/184 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R   +   + +  LYI  F   G P L+ + L +           F           + +
Sbjct: 41  RTSEKSGPRVIAKLYIELF--QGTPLLMQLFLVF-----------FGVALMGMNISPWAA 87

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +T+A++AEI R  + ++ +GQ EA+ +L +T  +  R V+LPQA+R  + P  
Sbjct: 88  AALALTLFTSAYLAEIWRGCVESISKGQWEASASLAMTPLEQMRYVILPQALRIAVAPTV 147

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K +++   +GF +L   G  + N T +   +       Y  L   ++L    L
Sbjct: 148 GFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHL 207

Query: 389 NAKI 392
             ++
Sbjct: 208 ERRL 211



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 36/107 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG L+   R S       I ++Y+E+F+  P L
Sbjct: 6   WDIVRNLLIGLQWTVALSLVAFIGGGLIGLLIMGMRTSEKSGPRVIAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|329910725|ref|ZP_08275366.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546105|gb|EGF31168.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 221

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 13/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R    +       + I    I   P L+ +   + +  D                   
Sbjct: 46  MMRRSPLRLFAWPATVVIEF--IRSTPLLIQLYFLFYVLPDY-----------GLTMSAL 92

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L+ + A ++AE+ R+GL +VPRGQ EAA A+ L      R ++LPQA+R I+P 
Sbjct: 93  TAGMVGLALHYACYVAEVYRAGLDSVPRGQWEAAKAMSLGPWNVYRSIVLPQAIRPIVPA 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + + K++ +  A+   +L+     I +Q+ + IE I +    +L +S+++AL + 
Sbjct: 153 LGNYLIAMFKDTPVLSAITVVELMLQAKNIGSQSFRYIEPITLTGIFFLLISLVVALLVR 212

Query: 387 RLNAKIAL 394
           RL A++ +
Sbjct: 213 RLEAQLRM 220



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
           +  +  +         +L   + T  +       A ++G ++   R S  +L AW   V 
Sbjct: 3   NDTLFDWQFAWQILPDLLHASLTTIGITMVAFALALVLGLVLAMMRRSPLRLFAWPATVV 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +E  R+ P L+ ++FL+  +               G+ L+ 
Sbjct: 63  IEFIRSTPLLIQLYFLFYVLPDYGLTMSALTAGMVGLALHY 103


>gi|282854428|ref|ZP_06263765.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|282583881|gb|EFB89261.1| conserved hypothetical protein [Propionibacterium acnes J139]
          Length = 216

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +GL  ++   L  ++ F  P   QF  I    V     +  I L     A++ EI RS
Sbjct: 19  VFWGLLAVLYPTLPIEVPFGGP---QFASIETEQVVTTLATTIIGLDLNENAYLTEITRS 75

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL +V  GQ EAA  LG+      R V++PQ MR II PL ++ + +LK +SL +AV F 
Sbjct: 76  GLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGNETIGMLKTTSLVLAVPFT 135

Query: 348 -DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            DL      + N+    I ++++  F YL ++ ++ +  + L
Sbjct: 136 LDLQYATSAMANRIYAPIPLLVVTAFWYLVMTSVLMIGQHFL 177


>gi|260460036|ref|ZP_05808289.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium opportunistum WSM2075]
 gi|259034247|gb|EEW35505.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 88/227 (38%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M   +              ++ +   VL +V++  A  L R       +AL   YI  F 
Sbjct: 1   MTQWSGYFGLILQGALVTIELTLMGSVLALVMAFLAG-LGRLSRFFALRALATAYIEFF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   Y           F             +  +AL     A+ AE+VR  
Sbjct: 59  -RGTSIFVQLFFAY-----------FVLPLVGFELTPLQAGVLALGLNVGAYAAEVVRGA 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ R Q EA IAL L   +  R V+LPQA   ++P   +  + LLK +S+   +   D
Sbjct: 107 VQSIGREQHEACIALNLGRWQGLRHVILPQAFLVMLPTFGNNAIELLKATSVVSLISLGD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L      +  QTG  +      + IY  L+++I+  +  L  ++A  
Sbjct: 167 LTFQAQVVRAQTGNTMVPFTTILIIYFILALLISWGVRSLERRMARG 213



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G + T  L   G + A ++  L G GRLS    +  +   Y+E FR     V 
Sbjct: 7   YFGLILQGALVTIELTLMGSVLALVMAFLAGLGRLSRFFALRALATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSV 155
           +FF Y  +  V
Sbjct: 67  LFFAYFVLPLV 77


>gi|241890035|ref|ZP_04777333.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Gemella haemolysans ATCC 10379]
 gi|241863657|gb|EER68041.1| inner membrane amino-acid ABC transporter permease protein YecS
           [Gemella haemolysans ATCC 10379]
          Length = 214

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 19/213 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  LG+V++         F+ K       +YI  +++ G P L+ +   Y +
Sbjct: 21  VFFLVLVLSIPLGVVIAFIM-----RFNIKLLNYFINIYI--WIMRGTPLLLQLIFIYYV 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  IA +   AA+ AEI R G+ ++P+GQ EAA  L 
Sbjct: 74  -----------LPSVGIRFDRLPAAIIAFTLNYAAYFAEIFRGGIESIPKGQYEAAKVLK 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R V+LPQ ++ ++P + ++ ++L+K++SL  A+G +DL+    T  N+    +
Sbjct: 123 FTQFQTIRYVILPQVIKIVLPSVFNEIMSLVKDTSLVYALGISDLILASRTAANRDASLL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +   IYL L  ++ +   ++  +     +
Sbjct: 183 PMF-VAGAIYLILIGIVTVVSKQVEKRYNYDRR 214



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  + F  ++ +  +G ++        KL+ +   +Y+ + R  P L+ + F+
Sbjct: 11  LINGGLITLEVFFLVLVLSIPLGVVIAFIMRFNIKLLNYFINIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV    D          LN 
Sbjct: 71  YYVLPSVGIRFDRLPAAIIAFTLNY 95


>gi|289705234|ref|ZP_06501633.1| ABC transporter, permease protein [Micrococcus luteus SK58]
 gi|289557984|gb|EFD51276.1| ABC transporter, permease protein [Micrococcus luteus SK58]
          Length = 305

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 12/236 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
              +    G    N  L     T+ +     V S V G+V         R       + L
Sbjct: 61  RRWLAAVDGDAWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFL-----RLAPFGPVRWL 115

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             + +  F    +P LV++   YQL       G      G      + ++  AL+ Y  +
Sbjct: 116 AAVVVEFF--RAVPVLVMMVFFYQLFAQVARTGAIQPQDG-----PYYAVIAALTLYNGS 168

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            IAE+VRSG+ ++PRGQ EAA A+G+T  ++ RLV +PQA+ +++P L SQ++ +LK+S+
Sbjct: 169 VIAELVRSGVRSLPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSA 228

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +GF +L+     + +  G  ++ +++   I++ ++ ++     RL+ +++ +
Sbjct: 229 LGYLIGFFELLQYARQLGSGNGNILQSLVVAAVIFIVINFLLTWAATRLSRRLSSR 284



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 36/83 (43%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +  +      ++    L G   T   A   ++ + + G + G  RL+    V W+  V 
Sbjct: 60  GRRWLAAVDGDAWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFLRLAPFGPVRWLAAVV 119

Query: 133 VEVFRNIPPLVVIFFLYKSVLSV 155
           VE FR +P LV++ F Y+    V
Sbjct: 120 VEFFRAVPVLVMMVFFYQLFAQV 142


>gi|253575107|ref|ZP_04852446.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845563|gb|EES73572.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 236

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 15/238 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F      + LS    T+   A      FV+G++ +LF     R +       +   Y+
Sbjct: 5   PSFVWTAFVQLLSAIPTTLMITAVSVSVGFVIGVITALF-----RLYRVPVLGQISTAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAA 279
           +   I G P L  + L Y   F  PV+       F +   S   P     YI+ S    A
Sbjct: 60  TF--IRGTPMLTHLLLIY---FGLPVIIDGLSEGFGWGFKSASIPMIAFAYISFSITAGA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++E+VRSGL+AV RGQ+EAA ++G+T  +A R ++ PQA+   +P L++  + +L  S+
Sbjct: 115 YMSEVVRSGLLAVNRGQLEAAYSIGMTTFQALRRIVFPQALAFSLPNLSNSAIGMLHGST 174

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LA  V   D+ +    + +   +  E  +    I+  L+++I     RL  +I L  +
Sbjct: 175 LAFTVSVVDINAKAQIVASTNWKFFEAYVAAALIFWGLTVLIERLTARLEKRIQLYNR 232



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L     T  +    +    +IG +    RL    ++  I   YV   R  P L
Sbjct: 9   WTAFVQLLSAIPTTLMITAVSVSVGFVIGVITALFRLYRVPVLGQISTAYVTFIRGTPML 68

Query: 143 VVIFFLYKSVL 153
             +  +Y  + 
Sbjct: 69  THLLLIYFGLP 79


>gi|115360581|ref|YP_777718.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115285909|gb|ABI91384.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 248

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFIWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    IYL L+ ++   +  L  +++
Sbjct: 197 VFVCAALIYLGLNFIVVRLLGALEWRLS 224


>gi|70729565|ref|YP_259303.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68343864|gb|AAY91470.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 236

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 5/210 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             AK+   SF LG VL L    L R    +  +     Y+  F   G P L  + + Y  
Sbjct: 29  VTAKLVAISFSLGAVLGLLI-ALGRLSSNRFLRRFTGAYVYFF--RGSPLLAQLFMLYYG 85

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                   Q   +        F +L +A +  TAA+ AEI+R  L+AV +GQ EA  AL 
Sbjct: 86  LGSFKGFWQDVGLWWFFRDAWFCTL-LAFTLNTAAYQAEILRGSLLAVAQGQREACKALS 144

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+   A R V+LPQ++   I PL ++ + ++K S++A  V   DL+ V     +++    
Sbjct: 145 LSRWTAFRKVILPQSLLIAIGPLGNELILMIKASAIASLVTIYDLMGVTKLAFSRSFD-F 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +I L    +YL +  ++   +  L  ++  
Sbjct: 204 QIYLWAAVLYLLIVEVVRRSLKYLEGRLGR 233



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 40/117 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    + G + T  L         ++G L+  GRLS+N+ +      YV  FR  P L
Sbjct: 17  ERYGPRFIDGLLVTAKLVAISFSLGAVLGLLIALGRLSSNRFLRRFTGAYVYFFRGSPLL 76

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
             +F LY  + S         +  F        L   TL         +   +L + 
Sbjct: 77  AQLFMLYYGLGSFKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEILRGSLLAVA 133


>gi|308174445|ref|YP_003921150.1| glutamine ABC transporter permease [Bacillus amyloliquefaciens DSM
           7]
 gi|307607309|emb|CBI43680.1| glutamine ABC transporter (permease) [Bacillus amyloliquefaciens
           DSM 7]
          Length = 218

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 112/230 (48%), Gaps = 17/230 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L F          + + S +L  +  L A  L      +  K   +  +
Sbjct: 1   MDFSGAYTPGHLLFLWNGFLITLYVALVSIILSFIFGLAAGTL------RYAKIPAVSGV 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++  +  L L+ + +   F  P +G    I          +   AL+ + +A ++EI
Sbjct: 55  IAAIVETIRNLPLLLIIFFTFFALPEIGIKLEIT--------AAAITALTIFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL +V +GQ++AA + GLT+ +   LV++PQA+R ++PP+ SQ+++LLK++SLAV +
Sbjct: 107 IRSGLQSVEKGQIDAARSSGLTYTQTLFLVVMPQALRRMVPPIVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L+     +  Q+   G    I L+   +Y +++  ++L   RL A+
Sbjct: 167 ALPELIHNAQILNGQSADGGYFFPIFLLAALMYFAVNYSLSLAARRLEAR 216



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 36/74 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  GF+ T ++A   +I + I G   G  R +    V+ +    VE  RN+P L++
Sbjct: 11  HLLFLWNGFLITLYVALVSIILSFIFGLAAGTLRYAKIPAVSGVIAAIVETIRNLPLLLI 70

Query: 145 IFFLYKSVLSVLPI 158
           IFF + ++  +   
Sbjct: 71  IFFTFFALPEIGIK 84


>gi|307331404|ref|ZP_07610523.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces violaceusniger Tu 4113]
 gi|306882963|gb|EFN14030.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces violaceusniger Tu 4113]
          Length = 249

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 12/185 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R       + L   Y+  F   G   LVL+   + L F  P+   +  +         
Sbjct: 37  IARTSRLWIVRFLTGFYVEIF--RGTSALVLM---FWLFFVMPLAFGYQLV-------SM 84

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  +AL     A+ +EIVR  + +V   Q EAAIAL  T  +  R V+LPQA+  +IPP
Sbjct: 85  WAAVLALGLTYGAYGSEIVRGAIASVAPAQREAAIALSFTPAQRMRRVILPQAIPEMIPP 144

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  + LLK ++L  AV  AD+          TG ++EI  I + +Y  L+ ++   M 
Sbjct: 145 FNNLLIELLKATALVSAVSVADITFAAQLSRLATGDSLEIYAIILVLYFVLAFVLTRLMR 204

Query: 387 RLNAK 391
            L  +
Sbjct: 205 LLERR 209



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L     + A  +   +G  R S   +V ++   YVE+FR    LV+
Sbjct: 6   WENWLLPGIWITIQLTLFSAVFAAAVAFGIGIARTSRLWIVRFLTGFYVEIFRGTSALVL 65

Query: 145 IFFLYKSVLSVL 156
           +F+L+  +    
Sbjct: 66  MFWLFFVMPLAF 77


>gi|184158819|ref|YP_001847158.1| arginine/histidine ABC transporter permease [Acinetobacter
           baumannii ACICU]
 gi|294843460|ref|ZP_06788143.1| ABC-type arginine/histidine transport system, permease component
           [Acinetobacter sp. 6014059]
 gi|183210413|gb|ACC57811.1| ABC-type arginine/histidine transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|322507368|gb|ADX02822.1| ABC-type arginine/histidine transport system, permease component
           [Acinetobacter baumannii 1656-2]
 gi|323518734|gb|ADX93115.1| ABC-type arginine/histidine transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 237

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 88/220 (40%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G VL++    L+R       +    +++ T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFVLAVPL-SLARVSENIWLRGP--VWLFTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + +   +  +          +A +  T A+  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYIHEHQTLD-AFFREGINCTILAFALNTGAYTTEIFTGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFSAFGIAAVLYAVLAFILIWIFRKLEKR 227


>gi|170701275|ref|ZP_02892241.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170133798|gb|EDT02160.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 248

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S V P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFVWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    IYL L+ ++   +  L  +++
Sbjct: 197 VFVCAALIYLGLNFIVVRLLGALEWRLS 224


>gi|163800420|ref|ZP_02194321.1| arginine ABC transporter, permease protein [Vibrio sp. AND4]
 gi|159175863|gb|EDP60657.1| arginine ABC transporter, permease protein [Vibrio sp. AND4]
          Length = 222

 Score =  126 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++ + +      + T+ ++   S V+G +L+L  T L+          +    I+ F   
Sbjct: 1   MSEQHVWQMLAGLSTSLQLTAASLVVGCILALMMT-LTLILRTPGLHWVSRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +  F   + +S  +    +AL+  TAA+ A++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDAVRESVF--WTWLSQPWFCAMLALALNTAAYSAQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPSGQWQACRALGMGKIATLG-VLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 40/113 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G   +  L  + ++   I+  ++    +     + W+ R  + +F   P 
Sbjct: 2   SEQHVWQMLAGLSTSLQLTAASLVVGCILALMMTLTLILRTPGLHWVSRGIITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        + +               L+    T   +A++F  +F
Sbjct: 62  LVQIFLVYYGPGQFDAVRESVFWTWLSQPWFCAMLALALNTAAYSAQLFKGAF 114


>gi|299770478|ref|YP_003732504.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. DR1]
 gi|298700566|gb|ADI91131.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. DR1]
          Length = 225

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 11/234 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  N   ++           + V + + GI++      + R  +          Y+
Sbjct: 1   MDFSLLHNPDVIAALKEGFIFTLTVTVLAMMGGILIGTPL-AMMRLSNNAIASNFAKFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       + LI + +  +F  P + +F      T      S  +  + + AAF +EI
Sbjct: 60  DLFR-----GIPLIQVIFIFYFLLPKIFEF---QSDTYWGPLFSSVVTFAIFEAAFFSEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ ++ RGQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +
Sbjct: 112 VRSGIQSISRGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVI 171

Query: 345 GFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D +    T+ N  G        LI   +Y   S +++  + RL  KIA+  
Sbjct: 172 SAPDFLGRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQQKIAIIR 225



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 6/158 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS N + +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNNAIASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LYKSVLSVLPIPDHSIV-LPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLF 203
            Y  +  +      +     F   +          +    + I   S      G  L   
Sbjct: 74  FYFLLPKIFEFQSDTYWGPLFSSVVTFAIFEAAFFSEIVRSGIQSISRGQVNAGYALGFT 133

Query: 204 ATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             +  R+    +     LP+L   T ++F   +LV + 
Sbjct: 134 YGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVI 171


>gi|253575036|ref|ZP_04852375.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845492|gb|EES73501.1| polar amino acid ABC transporter [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 216

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 19/207 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V SF++G ++ +         + K     P++ +   LI  LP L++I         
Sbjct: 28  LSIVLSFLIGCIVGVI-------RYTKLPVLSPIMLVGVELIRNLPLLLIIFF------- 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                +F             +    L+ + AA I+EIVRSGL ++ +GQ+EAA + GL+ 
Sbjct: 74  ----MRFALPEVGIKLGLVAATVTGLTIFEAAMISEIVRSGLASIDKGQIEAARSSGLSA 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEI 366
            +    ++LPQ +R ++PPL SQ+++LLK++SLAV +   +L+   G +I       I I
Sbjct: 130 VQTLWHIVLPQGLRRMVPPLVSQFISLLKDTSLAVVISLPELMHHAGIVIGHGYTYTIPI 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L+   IY +++ ++++   +L A+ A
Sbjct: 190 LLLVALIYFTVNFVLSVISRQLEARRA 216



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 38/73 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T  +A   ++ + +IG +VG  R +   +++ I  V VE+ RN+P L++I
Sbjct: 12  LRFLADGLYVTLIVAGLSIVLSFLIGCIVGVIRYTKLPVLSPIMLVGVELIRNLPLLLII 71

Query: 146 FFLYKSVLSVLPI 158
           FF+  ++  V   
Sbjct: 72  FFMRFALPEVGIK 84


>gi|254224688|ref|ZP_04918304.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
 gi|125622751|gb|EAZ51069.1| amino acid ABC transporter, permease protein [Vibrio cholerae V51]
          Length = 298

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALP-LLYIS 225
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L+++ 
Sbjct: 63  PYFLQGLVATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H  +         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLSLSMLFKQVEKR 291



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 69/218 (31%), Gaps = 22/218 (10%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R     +   L L +  +  W          +S + +   +    A       ++    
Sbjct: 10  SRYRFTLLDGGLLLAIASLIGWLYY-------RSEVGIHYHWHWREA-----WTLIFTPR 57

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                   L G V T  L+  GM+ A ++G+L+G  R      V      +V++ RNIPP
Sbjct: 58  ADGSLPYFLQGLVATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPP 117

Query: 142 LVVIFFLYKSVL----------SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           LV +F  Y  +            +L      +            L    L+      +  
Sbjct: 118 LVFVFIFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLS 177

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +++  IV +  A      +       LP      ++I
Sbjct: 178 SAYIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVI 215


>gi|300855936|ref|YP_003780920.1| putative amino acid ABC transporter permease [Clostridium
           ljungdahlii DSM 13528]
 gi|300436051|gb|ADK15818.1| predicted ABC-type aminoacid transporter, permease component
           [Clostridium ljungdahlii DSM 13528]
          Length = 221

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 11/228 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F              ++    +I + S +  ++LS+    + R++       L  +YI
Sbjct: 1   MNFDFQWFINLFPIVLPSLKLTIEISLVSLIFTLLLSVVI-SIIRYYKVWGLYQLFGVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F         L+A  + L+F  P +     I        F +  IAL+  TA+F+AE 
Sbjct: 60  TFFRATP-----LVAQLFMLYFGLPCV-----IPALKSMTAFQATVIALTLNTASFMAET 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ L +V  GQ+EA  ++ +T  +    V+LPQA    +P L +Q++ ++K S+L   V
Sbjct: 110 LRAALESVEVGQLEACYSMSMTKYQTMMRVVLPQAFVVALPSLGNQFIGIIKGSALGFTV 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G AD+++   T    T +  E  L    IYL + I +      +  +I
Sbjct: 170 GLADIMAKAKTEAALTLRFFEAYLCVTLIYLVIVIFVEKIQRLVEKRI 217



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L     T  ++   +I   ++  ++   R      +  +  VY+  FR  P +  +F LY
Sbjct: 16  LPSLKLTIEISLVSLIFTLLLSVVISIIRYYKVWGLYQLFGVYITFFRATPLVAQLFMLY 75

Query: 150 KSVLSVLPIPDHSIVLP 166
             +  V+P         
Sbjct: 76  FGLPCVIPALKSMTAFQ 92


>gi|283784424|ref|YP_003364289.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
 gi|282947878|emb|CBG87440.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
          Length = 224

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V+GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLLITLKITLTAVVVGIVWGTILAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P L Q             +S  +A S + AA+ +E
Sbjct: 55  FAKVYVNVFRSIPLVMVLLWFYLIVPGLLQDVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 38/66 (57%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T  +  + ++   + GT++   RLS+   VAW  +VYV VFR+IP ++V+ +
Sbjct: 15  YLLDGLLITLKITLTAVVVGIVWGTILAVMRLSSFAPVAWFAKVYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|146317962|ref|YP_001197674.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|146320149|ref|YP_001199860.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|253751185|ref|YP_003024326.1| transport system membrane protein [Streptococcus suis SC84]
 gi|253753086|ref|YP_003026226.1| transport system membrane protein [Streptococcus suis P1/7]
 gi|253754908|ref|YP_003028048.1| transport system membrane protein [Streptococcus suis BM407]
 gi|145688768|gb|ABP89274.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|145690955|gb|ABP91460.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|251815474|emb|CAZ51052.1| transport system membrane protein [Streptococcus suis SC84]
 gi|251817372|emb|CAZ55108.1| transport system membrane protein [Streptococcus suis BM407]
 gi|251819331|emb|CAR44693.1| transport system membrane protein [Streptococcus suis P1/7]
 gi|292557745|gb|ADE30746.1| Amino acid ABC transporter, permease protein [Streptococcus suis
           GZ1]
 gi|319757454|gb|ADV69396.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis JS14]
          Length = 223

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 14/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    F   +    +      +     + +  F LG     F   L R       + L +
Sbjct: 4   NWQAVFNADIAREAIPQILEGLPYTLSLSLIGFALGTFCGFFV-ALMRMSKFGPLRWLAM 62

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +IS  L+ G+P +VL+   Y   F  P +                +  IA +  ++A+I
Sbjct: 63  AHIS--LMRGIPLMVLLFFIY---FGLPFM--------GLQLDAISASIIAFTSMSSAYI 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+ L A+ +GQ EAA +LGL      R +++PQA R  +PPL++  L+++K++SL 
Sbjct: 110 SEIIRASLSAIDKGQWEAARSLGLRTNVIHRKIIIPQAFRIALPPLSNVLLDMVKSTSLT 169

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   ++ +    +       + + +    IY  +  + A    +L  ++A
Sbjct: 170 AMITVPEIFNKAKIVGGAKSDYMTVYICVALIYWVICTLYAFGQLKLEKRLA 221



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L+  G    T  G  V   R+S    + W+   ++ + R IP +V++FF+
Sbjct: 21  ILEGLPYTLSLSLIGFALGTFCGFFVALMRMSKFGPLRWLAMAHISLMRGIPLMVLLFFI 80

Query: 149 YKSVL 153
           Y  + 
Sbjct: 81  YFGLP 85


>gi|34498542|ref|NP_902757.1| histidine transport system membrane protein M [Chromobacterium
           violaceum ATCC 12472]
 gi|34104398|gb|AAQ60756.1| histidine transport system membrane protein M [Chromobacterium
           violaceum ATCC 12472]
          Length = 221

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 92/191 (48%), Gaps = 12/191 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-- 263
            ++R    +       +++  ++  G P LV + + Y        L QF+++  S     
Sbjct: 30  AVARVSRRRALSG--AVWLFGYVFRGTPLLVQLFIIYY------GLAQFDWVRDSWAWHY 81

Query: 264 --PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               ++   +A +  TAA+  EI+   + A   G++EAA ++G++H    R ++LP A+R
Sbjct: 82  LQDAYVCAILAFTLNTAAYTTEIIAGQIRATHWGEIEAARSMGMSHWLMLRRIVLPSALR 141

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P  +++ + +L+++++A  V  ADL  V   I +++    E  L    IYL+L+  +
Sbjct: 142 RALPAYSNEVIMMLQSTAIAGLVTLADLTGVARRIYSESYMPFEPFLTAALIYLALTFAL 201

Query: 382 ALFMNRLNAKI 392
              M R   + 
Sbjct: 202 VWLMKRAERRY 212


>gi|27367226|ref|NP_762753.1| arginine transporter permease subunit ArtM [Vibrio vulnificus
           CMCP6]
 gi|27358794|gb|AAO07743.1| Arginine ABC transporter, permease protein ArtM [Vibrio vulnificus
           CMCP6]
          Length = 222

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T        +T            L  G P
Sbjct: 4   QHLWQLLEGLVTSLELTAVSLLVGCILSLLMTA---TLILRTPLLHWFSRGVITLFTGTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        +   +F+      P F    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLIYYGPGQFDAIRD-SFVWQWLSQPWF-CAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKLVTL-KVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKK 215



 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G V +  L    ++   I+  L+ A  +    L+ W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLVTSLELTAVSLLVGCILSLLMTATLILRTPLLHWFSRGVITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I D  +            L+    T   + ++F  +F
Sbjct: 62  LVQIFLIYYGPGQFDAIRDSFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|23464701|ref|NP_695304.1| permease protein of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|227546807|ref|ZP_03976856.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|23325266|gb|AAN23940.1| permease protein of ABC transporter system [Bifidobacterium longum
           NCC2705]
 gi|227212769|gb|EEI80650.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
          Length = 248

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 14/235 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + F      R   F          I VF  +L I + L              + +  +
Sbjct: 28  RPMTFDWSFVQRYAPFFVNGTLMTLFISVFGILLAIAVGLV-CAGVEIARIPVARQIVRI 86

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P LV +   Y L+F  P L          V        + L     +++A
Sbjct: 87  YIE--LSRNTPLLVQL---YFLYFGLPKL--------GVVWSAETCAIVGLGFLGGSYMA 133

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R GL AVP  Q E A  LGLT  +    V+LPQA+ + IP + +  + L K SS+  
Sbjct: 134 EAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVS 193

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A+  AD++ +   +I       E + + +  YL + + I++F   L  +   + +
Sbjct: 194 AIALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISIFGTWLERRFDYERR 248



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 40/78 (51%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA   + G + T +++  G++ A  +G +     ++   +   I R+Y+E+ R
Sbjct: 33  DWSFVQRYAPFFVNGTLMTLFISVFGILLAIAVGLVCAGVEIARIPVARQIVRIYIELSR 92

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV ++FLY  +  +
Sbjct: 93  NTPLLVQLYFLYFGLPKL 110


>gi|15601512|ref|NP_233143.1| arginine transporter permease subunit ArtM [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|147672214|ref|YP_001215535.1| arginine transporter permease subunit ArtM [Vibrio cholerae O395]
 gi|153818652|ref|ZP_01971319.1| arginine ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|153820681|ref|ZP_01973348.1| arginine ABC transporter, permease protein [Vibrio cholerae B33]
 gi|229506086|ref|ZP_04395595.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae BX
           330286]
 gi|229510057|ref|ZP_04399537.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           B33]
 gi|229516382|ref|ZP_04405829.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           RC9]
 gi|229522317|ref|ZP_04411733.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TM
           11079-80]
 gi|229526722|ref|ZP_04416126.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae bv.
           albensis VL426]
 gi|229528370|ref|ZP_04417761.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           12129(1)]
 gi|229605617|ref|YP_002876321.1| arginine transporter permease subunit ArtM [Vibrio cholerae
           MJ-1236]
 gi|254849918|ref|ZP_05239268.1| arginine ABC transporter [Vibrio cholerae MO10]
 gi|255746482|ref|ZP_05420429.1| arginine ABC transporter permease protein ArtM [Vibrio cholera CIRS
           101]
 gi|262152377|ref|ZP_06028510.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           INDRE 91/1]
 gi|262168599|ref|ZP_06036295.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           RC27]
 gi|262189844|ref|ZP_06048177.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae CT
           5369-93]
 gi|297580209|ref|ZP_06942136.1| arginine transporter permease subunit ArtM [Vibrio cholerae RC385]
 gi|9658179|gb|AAF96655.1| arginine ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|126510805|gb|EAZ73399.1| arginine ABC transporter, permease protein [Vibrio cholerae NCTC
           8457]
 gi|126521724|gb|EAZ78947.1| arginine ABC transporter, permease protein [Vibrio cholerae B33]
 gi|146314597|gb|ABQ19137.1| arginine ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227015182|gb|ACP11391.1| arginine ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229334732|gb|EEO00218.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           12129(1)]
 gi|229336880|gb|EEO01898.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae bv.
           albensis VL426]
 gi|229340302|gb|EEO05308.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TM
           11079-80]
 gi|229346263|gb|EEO11234.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           RC9]
 gi|229352502|gb|EEO17442.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           B33]
 gi|229356437|gb|EEO21355.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae BX
           330286]
 gi|229372103|gb|ACQ62525.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           MJ-1236]
 gi|254845623|gb|EET24037.1| arginine ABC transporter [Vibrio cholerae MO10]
 gi|255736236|gb|EET91634.1| arginine ABC transporter permease protein ArtM [Vibrio cholera CIRS
           101]
 gi|262023128|gb|EEY41833.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           RC27]
 gi|262030828|gb|EEY49459.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae
           INDRE 91/1]
 gi|262034275|gb|EEY52682.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae CT
           5369-93]
 gi|297535855|gb|EFH74689.1| arginine transporter permease subunit ArtM [Vibrio cholerae RC385]
 gi|327485763|gb|AEA80169.1| Arginine ABC transporter, permease protein ArtM [Vibrio cholerae
           LMA3894-4]
          Length = 222

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLLMT-VSLVMRTPVVHWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGIAGAFYLAVNGILTLIFRQIEKK 215



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G   +  L  + ++   I+  L+    +    +V W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLGTSLQLTAASLLVGCILSLLMTVSLVMRTPVVHWFSRAVITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I +  + +          L+    T   + ++F  +F
Sbjct: 62  LVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|238763901|ref|ZP_04624858.1| Histidine transport system permease protein hisQ [Yersinia
           kristensenii ATCC 33638]
 gi|238697869|gb|EEP90629.1| Histidine transport system permease protein hisQ [Yersinia
           kristensenii ATCC 33638]
          Length = 228

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S ++G++ +      +R           L    T LI G+P LVL+ L +  
Sbjct: 19  LALCSVLLSVIIGLIGAGGKLSSNRLLSG-------LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AVP GQ+EAA A G
Sbjct: 72  LQIVLNSITESLGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPVGQIEAARAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FSSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGVVYLIFTTISNGVLLWLERRYSHGVKR 225


>gi|218703987|ref|YP_002411506.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli UMN026]
 gi|293403915|ref|ZP_06647909.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli FVEC1412]
 gi|298379690|ref|ZP_06989295.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli FVEC1302]
 gi|300901164|ref|ZP_07119269.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|331662019|ref|ZP_08362942.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA143]
 gi|218431084|emb|CAR11960.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli UMN026]
 gi|291428501|gb|EFF01526.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli FVEC1412]
 gi|298279388|gb|EFI20896.1| glutamate Aspartate transport system permease gltK [Escherichia
           coli FVEC1302]
 gi|300355403|gb|EFJ71273.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|331060441|gb|EGI32405.1| glutamate/aspartate transport system permease protein GltK
           [Escherichia coli TA143]
          Length = 224

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITITAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITITAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|170691132|ref|ZP_02882298.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170144381|gb|EDT12543.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 238

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L+          ++ + +FVL +VL L  T L+     +  + +  +YI    I   P 
Sbjct: 11  YLNDFVRASWLTLQVTLLAFVLSMVLGLL-TALASASRVRLLRGIASVYIEA--IRNTPV 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ I + +           F           + +  IAL     A++AE+ R+G+ +VPR
Sbjct: 68  LLQIFIVF-----------FGLPSLGITLNAYTAGVIALGVNVGAYLAEVFRAGIQSVPR 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA  LGL   +    V+LPQA R++ P + +  + LL  +SL  A+   +L     
Sbjct: 117 GQLEAASILGLERSQIFMEVVLPQAARAVYPAIVNNLIQLLLGTSLLSAIALPELSGTAT 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I  +T   I+   I +  YL LS +++    ++  ++
Sbjct: 177 VINARTLLYIQTFTITLIAYLFLSNVLSWVAGQIGVRV 214



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 84  SYATAILVGFVN--------TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           SY    L G++N        T  +     + + ++G L      S  +L+  I  VY+E 
Sbjct: 2   SYEWITLAGYLNDFVRASWLTLQVTLLAFVLSMVLGLLTALASASRVRLLRGIASVYIEA 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157
            RN P L+ IF ++  + S+  
Sbjct: 62  IRNTPVLLQIFIVFFGLPSLGI 83


>gi|253987652|ref|YP_003039008.1| amino acid ABC transporter permease [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779102|emb|CAQ82262.1| similar to amino acid permease component of abc transporter
           [Photorhabdus asymbiotica]
          Length = 247

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 107/236 (45%), Gaps = 9/236 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +   N          D   +    + V+ ++  + +  L                 
Sbjct: 1   MDFSVIAENWRYLLFGTFPDGPLEGAALTLVISLIAGVISIVLGTVAGVALAMQKGFWVN 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               + G    + +I L +  +F  PV+            PE  ++  AL+  T+A++A 
Sbjct: 61  LLAAVLGFFRAIPVIMLIFWTYFLLPVMLGMEI-------PEITTVVCALALITSAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V++G+IA+  GQ +A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  
Sbjct: 114 GVKAGIIAIGAGQWQAGLSLGFNRWQVLWYIVLPQALRMMVPSFINQWIALIKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG A+L  +   + N++     E+ L   FIY  + + + L  N +  + +L+ +K
Sbjct: 174 VGVAELSFLATQVNNRSMVYPTEVFLFVAFIYFVMCLTLELAANYIARRFSLQRRK 229


>gi|150396325|ref|YP_001326792.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150027840|gb|ABR59957.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 384

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 119/306 (38%), Gaps = 21/306 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   L      A +  ++V +   +P L+           +L   
Sbjct: 92  ACWAFVNAKFAQFLFGRYPLDERWRPALVGILFVLLL--VPMLIPRIPYKGLNALLLLGA 149

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +                T          V SFV GI +SL       L R  +    
Sbjct: 150 LPVLAAILLPGGWFGLTYVETPLWGGLMVTLVLSFV-GIAVSLPLGILLALGRRSNMPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L   +I       L T VL      L    P    F+         +F+   I +S +
Sbjct: 209 KMLCTAFIEVIRGVPLIT-VLFMASVMLPLFLPQGVTFD---------KFLRALIGVSLF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+P+GQ E A +LGL++ +    ++LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMGFIVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     + T        +  ++   F++      ++ +   +   
Sbjct: 319 DTSLVSIIGMFDLLGIVRLNFSDTNWASAVTPLTGLIFAGFVFWLFCFGMSRYSGFMERL 378

Query: 392 IALKEK 397
           +   ++
Sbjct: 379 LDRSQR 384



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G L+  GR S   ++  +C  ++EV R +P + V+F  
Sbjct: 172 LWGGLMVTLVLSFVGIAVSLPLGILLALGRRSNMPVIKMLCTAFIEVIRGVPLITVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPQ 241


>gi|170679691|ref|YP_001742969.1| arginine transporter permease subunit ArtM [Escherichia coli
           SMS-3-5]
 gi|218704288|ref|YP_002411807.1| arginine permease ArtM [Escherichia coli UMN026]
 gi|293404166|ref|ZP_06648160.1| artM [Escherichia coli FVEC1412]
 gi|293409236|ref|ZP_06652812.1| artM [Escherichia coli B354]
 gi|298379949|ref|ZP_06989554.1| arginine transport system permease [Escherichia coli FVEC1302]
 gi|300901228|ref|ZP_07119329.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300935048|ref|ZP_07150080.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|331682370|ref|ZP_08382989.1| arginine transport system permease protein ArtM [Escherichia coli
           H299]
 gi|170517409|gb|ACB15587.1| arginine ABC transporter, permease protein ArtM [Escherichia coli
           SMS-3-5]
 gi|218431385|emb|CAR12263.1| arginine transporter subunit ; membrane component of ABC
           superfamily [Escherichia coli UMN026]
 gi|291428752|gb|EFF01777.1| artM [Escherichia coli FVEC1412]
 gi|291469704|gb|EFF12188.1| artM [Escherichia coli B354]
 gi|298279647|gb|EFI21155.1| arginine transport system permease [Escherichia coli FVEC1302]
 gi|300355302|gb|EFJ71172.1| ABC transporter, permease protein [Escherichia coli MS 198-1]
 gi|300459711|gb|EFK23204.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|331080001|gb|EGI51180.1| arginine transport system permease protein ArtM [Escherichia coli
           H299]
          Length = 222

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 YSQLLYGRTYDVM-VFGAAGIIYLIVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|323967600|gb|EGB63016.1| inner membrane transport system [Escherichia coli M863]
 gi|323976364|gb|EGB71454.1| inner membrane transport system [Escherichia coli TW10509]
 gi|325498168|gb|EGC96027.1| glutamate/aspartate transport system permease [Escherichia
           fergusonii ECD227]
 gi|327254338|gb|EGE65960.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli STEC_7v]
          Length = 224

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITITAVVIGILWGTMLAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITITAVVIGILWGTMLAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|290510404|ref|ZP_06549774.1| glutamate Aspartate transport system permease gltK [Klebsiella sp.
           1_1_55]
 gi|289777120|gb|EFD85118.1| glutamate Aspartate transport system permease gltK [Klebsiella sp.
           1_1_55]
          Length = 224

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + V+GIV       +      +    LPL +
Sbjct: 1   MYDFDWSSIVPSMPYLLAGLVITLKITVIAIVVGIVWGTLLAVM------RLSSFLPLAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKTYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLLVSWLKKR 222



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +    ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKTYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|86147678|ref|ZP_01065986.1| arginine ABC transporter, permease protein [Vibrio sp. MED222]
 gi|85834459|gb|EAQ52609.1| arginine ABC transporter, permease protein [Vibrio sp. MED222]
          Length = 222

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + LS     + T+ ++   S ++G +LSL  T        +      L      L  
Sbjct: 1   MNQQYLSQMLEGLVTSLQLTGASLLVGCILSLLMTV---TLILRIPVIHWLTRGIITLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +      + +S  +    +AL+  TAA+   + R    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDWIRESFL--WTWLSQPWFCAMLALALNTAAYSTLLFRGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EA  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPAGQWEACRALGMDKIATL-KVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINGQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKK 215


>gi|332160646|ref|YP_004297223.1| ABC-type amino acid transport system, permease component [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318604516|emb|CBY26014.1| putative amino acid ABC transporter, permease protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664876|gb|ADZ41520.1| ABC-type amino acid transport system, permease component [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330862544|emb|CBX72699.1| hypothetical protein YEW_JG40470 [Yersinia enterocolitica W22703]
          Length = 217

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 18/226 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYIST 226
           MF +   +    L +     + + +F+ G +++L     RLSR            +   T
Sbjct: 2   MFTDWDIIRNLLLAVRWTLLLSLTAFLGGTLVTLPLMLMRLSRWRWM-----TRFVRGYT 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            L  G P L+ + L +           F           + +  +AL+ +T+AF+ +I  
Sbjct: 57  ELFQGTPLLMQLFLAF-----------FGLALLGIDVSPWAAAAMALTLFTSAFLVDIWC 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P+GQ EA+  LGL+  +    V+ PQA R  I P     + ++K ++LA  +GF
Sbjct: 106 GSIDALPKGQWEASRCLGLSFSQTLFRVIAPQATRIAIAPTVGFSVQVIKGTALASIIGF 165

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G  + N T Q  ++  +    Y  +   ++ + + L  K 
Sbjct: 166 VELTKAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSRYSHYLEKKF 211



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 33/88 (37%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+ +  +  T++   +   RLS  + +    R Y E+F+  P 
Sbjct: 5   DWDIIRNLLLAVRWTLLLSLTAFLGGTLVTLPLMLMRLSRWRWMTRFVRGYTELFQGTPL 64

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L+ +F  +  +  +             +
Sbjct: 65  LMQLFLAFFGLALLGIDVSPWAAAAMAL 92


>gi|291301453|ref|YP_003512731.1| polar amino acid ABC transporter inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
 gi|290570673|gb|ADD43638.1| polar amino acid ABC transporter, inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
          Length = 310

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 119/276 (43%), Gaps = 18/276 (6%)

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
             ++V+ +  + +  F       V + +     +     +    +          +    
Sbjct: 20  RARIVSVVAGLLIAAF-------VTYAVIILSSNEFFSAEAWNTVFDAQLFETIWVKGLL 72

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+       + + V+G+++      + R    K  +A+  +Y+  F    L  L+ I  
Sbjct: 73  GTLRAAFFGCIGALVIGVIVG-----MGRVSRFKFIRAISAVYVQFFRSIPLLLLIWIPY 127

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L++        + I   T       + I LS Y  A +AEI+RSG+ A+P GQ  A 
Sbjct: 128 AINLYYGYMDALFTDEIWQLTSF-----VVIGLSIYNGAVLAEILRSGINALPPGQAMAG 182

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ- 359
            A+GL H +  R +++PQA+R+++P + +Q + L K++SL  A+ + +L+     + +  
Sbjct: 183 HAVGLRHGQVMRSIVMPQAIRNMLPAVLAQLIILFKDTSLGYAITYPELLHEARLLGSNF 242

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               ++ +    F+Y  ++      +N ++ K++ K
Sbjct: 243 NVALLQSLFTVAFVYFIIAYTAGKLVNVVDRKMSRK 278



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 17/131 (12%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           +     V ++  LL+     + V  + +N                  F   +        
Sbjct: 18  KQRARIVSVVAGLLIAAFVTYAVIILSSN-----------------EFFSAEAWNTVFDA 60

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             + T  + G + T   AF G I A +IG +VG GR+S  K +  I  VYV+ FR+IP L
Sbjct: 61  QLFETIWVKGLLGTLRAAFFGCIGALVIGVIVGMGRVSRFKFIRAISAVYVQFFRSIPLL 120

Query: 143 VVIFFLYKSVL 153
           ++I+  Y   L
Sbjct: 121 LLIWIPYAINL 131


>gi|167724446|ref|ZP_02407682.1| amino acid ABC transporter, permease/ATP-binding protein,
           His/Glu/Gln/Arg/opine family [Burkholderia pseudomallei
           DM98]
          Length = 229

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 1/216 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   +F F LG+ L+L     S          + L      ++  L    L  L   
Sbjct: 1   MLTALGALFGFALGVPLALARVSRSPLLAACAWAFIWLFRSIPLIVLLLILNNLGYLYDH 60

Query: 244 LHFDKPVL-GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
           +    P     F  +  + +   F +  + L+   AAF AE +R G+++V +GQ+EAA A
Sbjct: 61  VRLGVPFTGITFAEVATTDLISPFCAAVLGLTLNHAAFAAEGIRGGILSVDQGQLEAAAA 120

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL   +    ++LPQAMR+ +P   +  + L K SS+   +   +L      I  +  +
Sbjct: 121 LGLPRARQATRIVLPQAMRAFLPVAFNDLIALAKGSSMVYVLAMPELFYTVQVIYRRNLE 180

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            I ++++    YL +  ++++   ++  + A    +
Sbjct: 181 VIPLLMVATVWYLIILTVLSIVQAQVERRYARGAVR 216


>gi|153801948|ref|ZP_01956534.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|153827918|ref|ZP_01980585.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|229522565|ref|ZP_04411981.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|229526416|ref|ZP_04415820.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|124122523|gb|EAY41266.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           MZO-3]
 gi|148876763|gb|EDL74898.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           623-39]
 gi|229336574|gb|EEO01592.1| amino acid ABC transporter permease protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229340550|gb|EEO05556.1| amino acid ABC transporter permease protein [Vibrio cholerae TM
           11079-80]
 gi|327486004|gb|AEA80410.1| Amino acid ABC transporter, permease protein [Vibrio cholerae
           LMA3894-4]
          Length = 298

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALP-LLYIS 225
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L+++ 
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H  +         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLSLSMLFKQVERR 291



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEI--------DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           ++            L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYQWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL----------SVLPI 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  +            +L  
Sbjct: 85  VLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRD 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +            L    L+      +   +++  IV +  A      +       
Sbjct: 145 HTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|22125091|ref|NP_668514.1| glutamate/aspartate ABC transport system inner membrane permease
           [Yersinia pestis KIM 10]
 gi|45440929|ref|NP_992468.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
 gi|21957946|gb|AAM84765.1|AE013722_4 glutamate/aspartate ABC transport system inner membrane permease
           [Yersinia pestis KIM 10]
 gi|45435788|gb|AAS61345.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
          Length = 263

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 22  WNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGI 81

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+ + L      +     QF           F+S
Sbjct: 82  GACYVELFRNVPLIVQFFTWYLVVPELLPVNLGTWFKSELAPNIQF-----------FLS 130

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 131 SMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIPPMT 190

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  ++ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 191 SEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLV 250

Query: 389 NAKIAL 394
             K+ L
Sbjct: 251 EKKVQL 256



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 20  IDWNWGIFLQPAPFG----------NTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 69

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP+   + 
Sbjct: 70  LRTVPNRILSGIGACYVELFRNVPLIVQFFTWYLVVPELLPVNLGTW 116


>gi|116617692|ref|YP_818063.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096539|gb|ABJ61690.1| amino acid ABC transporter membrane protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 213

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 14/202 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
               F  ++G V       L       T + L   YI  +++ G P L+ +   Y     
Sbjct: 19  LGVFFLTIIGSVPLGILVSLGMKSPYFTIRWLINGYI--WIMRGTPLLLQLIFIYY---- 72

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                           P F +  IA     AA++AEI R GL +VPRGQ +AA  LG + 
Sbjct: 73  -------GLGMMGIAFPRFEAAIIAFIINYAAYLAEIFRGGLQSVPRGQYDAAKVLGFSK 125

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    ++LPQ ++ ++P   ++ +NL+K++SL   +G  D++  G    ++    +   
Sbjct: 126 IQTFFKIILPQVIKIVVPSFGNEVINLVKDTSLVYVIGLGDILRAGNIAASRD-VTLMPY 184

Query: 368 LIWMFIYLSLSIMIALFMNRLN 389
           L+   IYL ++ ++ L + R  
Sbjct: 185 LLVGLIYLIMTAVVTLLLRRSE 206



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 35/90 (38%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +   ++L G   T  + F  +I +  +G LV  G  S    + W+   Y+ + R  P L+
Sbjct: 6   TILPSLLAGLKTTLGVFFLTIIGSVPLGILVSLGMKSPYFTIRWLINGYIWIMRGTPLLL 65

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            + F+Y  +  +               +N 
Sbjct: 66  QLIFIYYGLGMMGIAFPRFEAAIIAFIINY 95


>gi|326439679|ref|ZP_08214413.1| ABC transporter permease protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 293

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 15/200 (7%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +  F LG+VL L    L R       +    +YI  F       L+ I +   +    P
Sbjct: 94  TLSGFALGLVLGLVV-ALMRLSSVAPYRWAATVYIEFFRGLPA-LLIFIFVGVAVPLAFP 151

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                   G       +  + + L    AA+IAE +R+G+ AVPRGQ+EAA +LG +H +
Sbjct: 152 --------GTEIPGGTYGKVALGLGLVAAAYIAETIRAGIQAVPRGQLEAARSLGFSHAR 203

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIE 365
           A   V++PQA R ++PPLT++ + L K+SSL + +G      +L   G  + +Q+  +  
Sbjct: 204 AMVSVIIPQAFRIVVPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASQSANSTP 263

Query: 366 IILIWMFIYLSLSIMIALFM 385
           I L+    YL +++ + L +
Sbjct: 264 I-LVAGVCYLLVTVPLGLVV 282



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 32/69 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + V   NT     SG     ++G +V   RLS+     W   VY+E FR +P L++  F+
Sbjct: 83  LTVALRNTVLYTLSGFALGLVLGLVVALMRLSSVAPYRWAATVYIEFFRGLPALLIFIFV 142

Query: 149 YKSVLSVLP 157
             +V    P
Sbjct: 143 GVAVPLAFP 151


>gi|320323221|gb|EFW79309.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320329748|gb|EFW85737.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330881453|gb|EGH15602.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 232

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRGSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|262403073|ref|ZP_06079633.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
 gi|262350572|gb|EEY99705.1| amino acid ABC transporter permease protein [Vibrio sp. RC586]
          Length = 298

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-------PLLYIS 225
              L     T+  +    V + VLG ++ +  +R +          +       PL+++ 
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H ++         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRNHIEEVHPLVTGLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPLGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  + N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEMANSSGLIFEIWLIVGAAYLVLCLTLSMLFKQVEKR 291



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 64/188 (34%), Gaps = 11/188 (5%)

Query: 57  LSLGIGFLSERAGFEIDQGI-------VPYTSD-SSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           + +T          L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYHWHWREAWGLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  + + L        L   
Sbjct: 85  VLGSLIGIARSRKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRN 144

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                  L           +  +   +    + L ++             +PL       
Sbjct: 145 HIEEVHPLVTGLFGPARLWENLLSGVLC---IGLLSSAYIAEIVRAGLANIPLGQWEAAD 201

Query: 229 IFGLPTLV 236
             GLPT V
Sbjct: 202 SLGLPTWV 209


>gi|163760313|ref|ZP_02167396.1| amino acid ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
 gi|162282712|gb|EDQ33000.1| amino acid ABC transporter, permease protein [Hoeflea phototrophica
           DFL-43]
          Length = 377

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 20/227 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+       V SF LGI+L+L      R       K   +++I  +    L T 
Sbjct: 165 WGGLLVTLVVAIVGIVVSFPLGILLAL-----GRRSEMPIVKMFCIIFIEFWRGVPLIT- 218

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL      L    P    F+         + +   I ++ +++A++AE++R GL A+P+G
Sbjct: 219 VLFMSSVMLPLFLPEGVTFD---------KLLRALIGVALFSSAYMAEVIRGGLQAIPKG 269

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA A+ LT  + TRLV++PQA++ +IP + + ++ L K++SL + +G  DL+ +   
Sbjct: 270 QYEAANAMALTFWQGTRLVIMPQALKLVIPGIVNTFIGLFKDTSLVLIIGLFDLLGIVQQ 329

Query: 356 IIN-----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +N              +    ++      ++ +   +  ++    K
Sbjct: 330 NMNDPNWISPATPATGFVFAALVFFIFCFGMSRYSAYMERRLDTGHK 376



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 21/204 (10%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           TA+  G + T  +A  G++ +  +G L+  GR S   +V   C +++E +R +P + V+F
Sbjct: 162 TALWGGLLVTLVVAIVGIVVSFPLGILLALGRRSEMPIVKMFCIIFIEFWRGVPLITVLF 221

Query: 147 FLYKSVLSVLPIPDHSIVL------------PFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
                +   LP       L             +   +   GL          A     +F
Sbjct: 222 MSSVMLPLFLPEGVTFDKLLRALIGVALFSSAYMAEVIRGGLQAIPKGQYEAANAMALTF 281

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQ 253
             G  L +    L           +P +  +   +F   +LVLI   +  L   +  +  
Sbjct: 282 WQGTRLVIMPQALK--------LVIPGIVNTFIGLFKDTSLVLIIGLFDLLGIVQQNMND 333

Query: 254 FNFIGGSTVSPEFMSLYIALSCYT 277
            N+I  +T +  F+   +    + 
Sbjct: 334 PNWISPATPATGFVFAALVFFIFC 357


>gi|153948328|ref|YP_001403105.1| polar amino acid ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|152959823|gb|ABS47284.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 251

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   V S + G+  ++  T L        G    +L       
Sbjct: 10  WRYLLWGTFPDGPLGGAALTVVISIMAGVASAVLGTVLGVALAMSRGVWAGILAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 MAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 224


>gi|328466492|gb|EGF37635.1| hypothetical protein LM1816_07287 [Listeria monocytogenes 1816]
          Length = 213

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG V+++           K      +L I  +++ G P L
Sbjct: 12  LDGAKTTLLVFAVTLVCSIPLGAVVAVGNIS-------KIAPLKFILNIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     +++IA     AA+ AEI R G +++  G
Sbjct: 65  LQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  + ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 114 QYESAKVLGLTYGQTLQKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 174 AMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKRFS 210



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 95


>gi|325972549|ref|YP_004248740.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta sp. Buddy]
 gi|324027787|gb|ADY14546.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 266

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 15/211 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATR---LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
             A   V  F +GIV +L   +   L+     +  K +   Y+  F   G P ++  A  
Sbjct: 37  CTALGCVIGFAVGIVQTLEPKKKDNLAYKIILRIIKLILTAYVELF--RGTPMMLQAAFI 94

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           Y        L              + +  + +S  T A++AE VR G+++V  GQ E A 
Sbjct: 95  YYGASQVFGLNL----------GMWEAAILIVSINTGAYMAETVRGGILSVDNGQTEGAK 144

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A+G+ H +    V+LPQA+R+I+P + +  +  +K++ +   +G  +L     +I     
Sbjct: 145 AIGMNHFQTMLTVILPQALRNIMPQIGNNLIINIKDTCVLSIIGTVELFFTFKSISGALY 204

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              E   + + IY  L+ + +  +     ++
Sbjct: 205 TYFEAATVILIIYFILTFVSSRILLAWENRM 235


>gi|317407541|gb|EFV87491.1| ABC-type amino acid transport system [Achromobacter xylosoxidans
           C54]
          Length = 321

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 14/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  GM    R  +     +     + V +   G+ L +    L R     T + + +  I
Sbjct: 96  MQGGMLGLARVPTSSWGGLPITLLLAVCALGAGLPLGVLL-ALGRRGSLPTARFISIGVI 154

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                     L L++L +      P++     +         +   IAL+ ++AA++AE+
Sbjct: 155 ELIR-----GLPLVSLLFMASIVLPIM-----LPAGMTIDSLLRAGIALTVFSAAYLAEV 204

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL A+P GQ EA+ ALGL+  + TRLV+LPQA+R +I PLT+  + ++KN+SL + V
Sbjct: 205 IRGGLQAIPPGQAEASRALGLSWWQMTRLVVLPQALRKVIAPLTNTAIVMIKNTSLVLIV 264

Query: 345 GFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  DL+S G   +         +E  L    IY  +   ++ +   L  +    E +
Sbjct: 265 GLFDLLSSGRAALTDPAWPTPYVETYLFIASIYFCICFGLSRYSMWLEHRYKKGELR 321


>gi|50122414|ref|YP_051581.1| putative amino acid ABC transporter permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|261822705|ref|YP_003260811.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|49612940|emb|CAG76391.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium atrosepticum SCRI1043]
 gi|261606718|gb|ACX89204.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 217

 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 88/222 (39%), Gaps = 11/222 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +           +       + S    I  +L    L      K   A   +++ + L  
Sbjct: 1   MTFTDWDIVRNLLLAARWTLLLSLTAFIGGALVTFPLMLLRLTKRKWATRFVHLYSELFQ 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + L +           F           + +  +AL+ +T+AF+ +I    + 
Sbjct: 61  GTPLLMQLFLAF-----------FGLALFGIDVSPWTAAALALTLFTSAFLVDIWCGSVE 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ EA+  LGL   +    V+ PQAMR  I P     + ++K ++LA  +GF +L 
Sbjct: 110 ALPKGQWEASRCLGLDFGQTLYRVIAPQAMRIAIAPTVGFSVQVIKGTALASIIGFIELT 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 170 KAGTMLNNVTYQPFKVFGLVALGYFLMCYPLSYYSRYLEKKF 211


>gi|283477848|emb|CAY73764.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 295

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 15/262 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +F L   V SV   P     +    F     LS    T+       V S +L      
Sbjct: 23  IALFILAIVVQSVAFNPRWEWSVFAHWFFAPAILSGLGQTLLLTLTASVLSVLLA----- 77

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGST 261
               L+R         L   YI  F    L  +++I   +  L+    +   F  +  +T
Sbjct: 78  ----LARLSPSWLLSGLAFSYIWLFRSLPLILVLIILYNFSYLYDRLSLGVPFTPLTLAT 133

Query: 262 VSP-----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                   +F +  I L+   AA+ AEIVR G+  V  GQ EAA ALGL   + T  ++L
Sbjct: 134 WKTIDVLGQFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIIL 193

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+IIP   ++ ++L K +++   +   +L      + N+T Q I ++++    YL 
Sbjct: 194 PQALRAIIPGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLL 253

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           ++ ++++  + +   +A    +
Sbjct: 254 ITTLLSVVQHYVERWLARGTTR 275


>gi|261212506|ref|ZP_05926791.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC341]
 gi|260838437|gb|EEX65093.1| arginine ABC transporter permease protein ArtM [Vibrio sp. RC341]
          Length = 222

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLLMT-VSLVMRTPVVHWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +     AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMFALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGVAGAFYLAVNGILTLIFRQIEKK 215



 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 40/113 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G   +  L  + ++   I+  L+    +    +V W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLGTSLQLTAASLLVGCILSLLMTVSLVMRTPVVHWFSRAVITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I +  + +           +    T   + ++F  +F
Sbjct: 62  LVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMFALALNTAAYSTQLFKGAF 114


>gi|229528069|ref|ZP_04417460.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
 gi|229334431|gb|EEN99916.1| amino acid ABC transporter permease protein [Vibrio cholerae
           12129(1)]
          Length = 298

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALP-LLYIS 225
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L+++ 
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H  +         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQMISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLSLSMLFKQVERR 291



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEI--------DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           ++            L G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYQWHWREAWTLIFTPRADGSLPYFLQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL----------SVLPI 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  +            +L  
Sbjct: 85  VLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRD 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +            L    L+      +   +++  IV +  A      +       
Sbjct: 145 HTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|170767753|ref|ZP_02902206.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia albertii TW07627]
 gi|170123241|gb|EDS92172.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia albertii TW07627]
          Length = 224

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLISYLKRRTA 224



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|330429007|gb|AEC20341.1| glutamate/aspartate transport system permease protein [Pusillimonas
           sp. T7-7]
          Length = 196

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 6/200 (3%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            +LGI L +    L+R F  +        Y++ F       + LI   +   F  P + +
Sbjct: 1   MMLGIALGVVL-ALARLFGPRWVSLAAAFYVNLFR-----AIPLILTIFWFFFLVPFVLR 54

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                         +   A     AA+  EIVR+G+ +V +GQM+AAIALGLT  +A R 
Sbjct: 55  AVTGNPYAGVGPIYAALSAFVLAEAAYYCEIVRAGINSVRKGQMQAAIALGLTRWQALRH 114

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA  ++ P L +Q + LLK++SL   +   D +     + ++ G  +E+ L     
Sbjct: 115 VVLPQAFHNMTPSLINQTIALLKDTSLVYVISLNDFLGAATKVAHRDGTLVEMYLFVAVT 174

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           YL+L       +N L  K A
Sbjct: 175 YLALCSFGVWLVNILKKKQA 194


>gi|325963973|ref|YP_004241879.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470060|gb|ADX73745.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 254

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 108/214 (50%), Gaps = 15/214 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S +LG VL L    +         + +  +Y   F       LV++ +   L  
Sbjct: 33  LILAVASGILGSVLGLAL-AMMGISRNAGARWVARIYTDIFRGLPA-ILVILVIGIGLS- 89

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+  +    G     P      +AL+   AA+I EI RSG+ +V +GQ+EA+ ALG +
Sbjct: 90  --PIAREIT--GSRNPYPL---GILALTLIAAAYIGEIFRSGIQSVEKGQLEASRALGFS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQ 362
           +  + RLV++PQ +R ++P L +Q+++LLK+SSL   +G A    ++  +G   +  TG 
Sbjct: 143 YGSSMRLVVVPQGIRRVLPALVNQFISLLKDSSLVFMLGLAASDREIFRIGNDAMANTGN 202

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  ++    +YL L++ +  F+N ++ ++   +
Sbjct: 203 -LSPLVAAGVLYLILTVPLTHFVNFIDHRLRTGK 235



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++VG  NT  LA +  I  +++G  +    +S N    W+ R+Y ++FR +P ++VI  +
Sbjct: 25  LMVGLPNTLILAVASGILGSVLGLALAMMGISRNAGARWVARIYTDIFRGLPAILVILVI 84

Query: 149 YKSV 152
              +
Sbjct: 85  GIGL 88


>gi|293602702|ref|ZP_06685143.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292818893|gb|EFF77933.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 229

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 11/230 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              L     +  T T+   A   V    LG +L++      +      G           
Sbjct: 10  WTALPYLFQTGMTFTLTLTALAAVMGLALGTLLAMMRLSRFKILSVPAG----------I 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVR 286
            +  + ++ L+ + +  +F  P +  +     + +    F S  I  + + AA+  EI+R
Sbjct: 60  YVNVMRSIPLLLVIFWFYFLVPYIAAWVVGSPTPLRVGAFNSAVITFTMFEAAYFCEIMR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++ RGQ+ A++A+GLT  +  R V+LPQA R+++P L ++ + L +++SL   +  
Sbjct: 120 AGIQSIARGQVSASMAIGLTPWQGMRYVVLPQAFRNMVPALLTRVIILFQDTSLVYVLSL 179

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            D +     I  + G+ +E+ L    +Y  +    +  +  L  +  +  
Sbjct: 180 TDFLGAASKIGQRDGRLVELYLFVAVVYFVICFTASRLVKLLEKRTRVLR 229



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 71/194 (36%), Gaps = 16/194 (8%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F++    +PY            G   T  L     +    +GTL+   RLS  K+++   
Sbjct: 6   FDVIWTALPYL--------FQTGMTFTLTLTALAAVMGLALGTLLAMMRLSRFKILSVPA 57

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            +YV V R+IP L+VIF+ Y  V  +      S         N+  ++F         +I
Sbjct: 58  GIYVNVMRSIPLLLVIFWFYFLVPYIAAWVVGSPTPLRVGAFNSAVITFTMFEAAYFCEI 117

Query: 190 F---VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + S   G V +  A  L+     +      ++    F       L  + + +Q   
Sbjct: 118 MRAGIQSIARGQVSASMAIGLTPWQGMR-----YVVLPQAFRNMVPALLTRVIILFQDTS 172

Query: 247 DKPVLGQFNFIGGS 260
              VL   +F+G +
Sbjct: 173 LVYVLSLTDFLGAA 186


>gi|262202137|ref|YP_003273345.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           bronchialis DSM 43247]
 gi|262085484|gb|ACY21452.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia
           bronchialis DSM 43247]
          Length = 296

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 15/264 (5%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           VF  I   +  + +     +     +           +         T+       V + 
Sbjct: 26  VFIAIVVAIAAYVIVILAGNDQFAGEKWEPFTKWSTWSGYIFPGLFRTLAAAVVSIVLAL 85

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +LG VL +   RLS H   +             +   +P L+L+   + L     V+   
Sbjct: 86  ILGAVLGI--GRLSDHLWVRMIAGF-----FVEVFRAIPVLILMVFTWFLFALYGVVPAS 138

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                      F ++   L+ Y  + +AEI+RSG+ ++P+GQ EA+ ALGL      RL+
Sbjct: 139 QL--------AFAAVVTGLTLYNGSVMAEILRSGINSLPKGQTEASKALGLRKSHMMRLI 190

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           LLPQA+ +++P L SQ +  LK+S+L   +G+++++        + G  I  + +   I 
Sbjct: 191 LLPQAVTAMMPALVSQMVVALKDSALGYIIGYSEIIRSALLSSARYGNYIPALFVVAVIM 250

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           + ++  ++ F   L  ++ +  +K
Sbjct: 251 ILINFGLSSFATWLEKRLRVGRRK 274



 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 17/144 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            ++ N    ++   ++  I  + +  +  N + +                  +   P+T 
Sbjct: 16  AQLRNRITAVVFIAIVVAIAAYVIVILAGNDQFAG-----------------EKWEPFTK 58

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S+++  I  G   T   A   ++ A I+G ++G GRLS +  V  I   +VEVFR IP 
Sbjct: 59  WSTWSGYIFPGLFRTLAAAVVSIVLALILGAVLGIGRLSDHLWVRMIAGFFVEVFRAIPV 118

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVL 165
           L+++ F +        +P   +  
Sbjct: 119 LILMVFTWFLFALYGVVPASQLAF 142


>gi|167461574|ref|ZP_02326663.1| Glutamine transport system permease protein glnP [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 217

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 19/209 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   V SF++G +L +      R+        L LL++          L L+ + + 
Sbjct: 24  WMAAVSIVLSFIIGSILGIL-----RYTRIPVVSQLVLLWVEMIRN-----LPLLLIIFF 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F  P +                S  IAL+ + +A I+EI+R GL ++ +GQ+EAA + 
Sbjct: 74  VRFALPEV--------GIKFDVITSAIIALTVFESAMISEIIRGGLNSIEKGQIEAARSS 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +    ++ PQA++ ++PP  SQ+++LLK++SLAV +   DL+     +  Q    
Sbjct: 126 GLTYIQTLWHIIFPQAVKRMVPPTVSQFISLLKDTSLAVIISAPDLMRNVEIVTAQNSNY 185

Query: 364 -IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I + +    +Y  ++ ++++   R   +
Sbjct: 186 VIPVFVFAAILYFVVNYILSVMAKRFELR 214



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 44/72 (61%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF  T W+A   ++ + IIG+++G  R +   +V+ +  ++VE+ RN+P L++IFF+
Sbjct: 15  LMEGFGITLWMAAVSIVLSFIIGSILGILRYTRIPVVSQLVLLWVEMIRNLPLLLIIFFV 74

Query: 149 YKSVLSVLPIPD 160
             ++  V    D
Sbjct: 75  RFALPEVGIKFD 86


>gi|119946457|ref|YP_944137.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865061|gb|ABM04538.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 246

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 7/194 (3%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-------FIGGSTVS 263
            +    + +P L +   + FG   LV         +    L  FN       ++      
Sbjct: 53  LYTTLIRGIPDLILMLLIFFGGQVLVNNLSYSLNEWINRTLTGFNPNHEWAAYLPDYINI 112

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             +++  I +     A++AE  R   +AV +GQ+EAA A G+   K    V+ PQ MR  
Sbjct: 113 SPYIAGIITIGFIFGAYMAETFRGAFLAVEKGQLEAATAYGMNKYKLFLRVMFPQMMRHA 172

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P + + +L LLK ++L   +G  D+V + G     T Q     +    ++L  + + +L
Sbjct: 173 LPGIGNNWLVLLKTTALVSVIGLQDMVKIAGDAGGSTQQPFTFYIAIALVFLFFTSVSSL 232

Query: 384 FMNRLNAKIALKEK 397
             +    K  +K +
Sbjct: 233 LFSWAERKYTIKTR 246


>gi|300697544|ref|YP_003748205.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074268|emb|CBJ53813.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum CFBP2957]
          Length = 233

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 5/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N          +     I   S++L +VL+     + R    +  +     Y+S      
Sbjct: 12  NPEFSKMLIEGVWMTLVIAGSSWLLAMVLAFVLLGI-RMVRSQLAERFVEAYVS--YHCN 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +PTLV +   Y        L   +++  +    E +   +AL    AA+ +E +RSGL A
Sbjct: 69  VPTLVQLMFWYFGISTLFPLPMLDWL--ADHHSEAVFSIVALGLCQAAYFSEDLRSGLRA 126

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ EAA ALG +     R VL+PQA+R+ +P L +  ++L KNSSLA+A+G  +L  
Sbjct: 127 IPPGQEEAARALGNSFIGTLRYVLMPQAVRNALPALINHSVSLFKNSSLAMAIGVTELTH 186

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I N + +A E  L+   +YL  S++I      L  +  +   +
Sbjct: 187 AVKEIENTSFRAFESYLLATVVYLGFSLVIMAAGAVLARRFRVVTGR 233



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 40/91 (43%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
              ++   ++  ++  ++ G   T  +A S  + A ++  ++   R+  ++L       Y
Sbjct: 3   GFDLMAILNNPEFSKMLIEGVWMTLVIAGSSWLLAMVLAFVLLGIRMVRSQLAERFVEAY 62

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           V    N+P LV + F Y  + ++ P+P    
Sbjct: 63  VSYHCNVPTLVQLMFWYFGISTLFPLPMLDW 93


>gi|153829858|ref|ZP_01982525.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39]
 gi|227812324|ref|YP_002812334.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|254226188|ref|ZP_04919783.1| arginine ABC transporter, permease protein [Vibrio cholerae V51]
 gi|254285778|ref|ZP_04960741.1| arginine ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|298499553|ref|ZP_07009359.1| arginine ABC transporter [Vibrio cholerae MAK 757]
 gi|125621290|gb|EAZ49629.1| arginine ABC transporter, permease protein [Vibrio cholerae V51]
 gi|148874659|gb|EDL72794.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39]
 gi|150424275|gb|EDN16213.1| arginine ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|227011466|gb|ACP07677.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|297541534|gb|EFH77585.1| arginine ABC transporter [Vibrio cholerae MAK 757]
          Length = 222

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLLMT-VSLVMRTPVVHWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKK 215



 Score = 36.8 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G   +  L  + ++   I+  L+    +    +V W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLGTSLQLTAASLLVGCILSLLMTVSLVMRTPVVHWFSRAVITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I +  + +          L+    T   + ++F  +F
Sbjct: 62  LVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|269139577|ref|YP_003296278.1| arginine transporter permease subunit [Edwardsiella tarda EIB202]
 gi|267985238|gb|ACY85067.1| arginine transporter permease subunit [Edwardsiella tarda EIB202]
 gi|304559465|gb|ADM42129.1| Arginine ABC transporter, permease protein ArtQ [Edwardsiella tarda
           FL6-60]
          Length = 238

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/193 (26%), Positives = 91/193 (47%), Gaps = 2/193 (1%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            L         + LP + +  F+ FG    L+ I+    L+     L     I    VSP
Sbjct: 44  ALLGTAWVTLLRGLPEILVVLFIYFGSSQMLLWISDGIDLNLGFTTLRLQLNIENFEVSP 103

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F+   +AL+   AA+ ++ +R  L AVP+GQ EA +ALGL+       +++PQ  R  +
Sbjct: 104 -FLCGVLALALLYAAYGSQTLRGALKAVPQGQREAGMALGLSKTHIFFRLVMPQMWRHAL 162

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q+L LLK+++L   +   DL+    +I  +T +      +   IYL +++     
Sbjct: 163 PGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYCVAAAIYLVITLFSQYI 222

Query: 385 MNRLNAKIALKEK 397
           + R+  +    E+
Sbjct: 223 LKRIELRTTRFER 235


>gi|238759068|ref|ZP_04620238.1| Histidine transport system permease protein hisQ [Yersinia aldovae
           ATCC 35236]
 gi|238702745|gb|EEP95292.1| Histidine transport system permease protein hisQ [Yersinia aldovae
           ATCC 35236]
          Length = 228

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +L +V+ L      +    +      L    T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVLLSVVIGLMG-AGGKLSSNRLLSG--LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F           +  I L     A+  E  R   +AVPRGQ+EAAIA G
Sbjct: 72  LQITLNSITEFFGFAQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPRGQIEAAIAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGAVYLIFTTLSNGVLLWLERRYSHGVKR 225


>gi|238063456|ref|ZP_04608165.1| ABC glutamate transporter permease component [Micromonospora sp.
           ATCC 39149]
 gi|237885267|gb|EEP74095.1| ABC glutamate transporter permease component [Micromonospora sp.
           ATCC 39149]
          Length = 290

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 19/267 (7%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           RN    V       ++L+ +    +               +     +       + +  +
Sbjct: 18  RNAILGVASIVGIVALLAYVGWKFYETGQFEARKWEQFQYAAVQRELLAGLWATLKAAGI 77

Query: 197 GIVLSLFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             VL+L    +   +R       +A     +  F    +P L+LI   Y +         
Sbjct: 78  AAVLALLFGAIFASARLSDRWVLRAPATFVVELF--RAIPLLILIFFGYYVPLQY----- 130

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                      +  +L I L  Y  + +AEI R+G+ AVP GQ E A A+GL   +  RL
Sbjct: 131 ------GWAIDKLWALVIGLMLYNGSVLAEIFRAGINAVPYGQTEGAYAIGLRKNQVLRL 184

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIW 370
           +LLPQA RS++P + SQ + LLK+++L   + + +L+ VG  I  +       +   LI 
Sbjct: 185 ILLPQAFRSMLPAIVSQLVVLLKDTALGFIITYPELLFVGKQIGGRLAFGLPYVPTYLIV 244

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             IY+++  ++++F   L  ++    +
Sbjct: 245 GAIYIAICGLLSIFAWWLQRRLGRIPR 271



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 40/101 (39%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T   A    + A + G +  + RLS   ++       VE+FR IP L++IF
Sbjct: 62  RELLAGLWATLKAAGIAAVLALLFGAIFASARLSDRWVLRAPATFVVELFRAIPLLILIF 121

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F Y   L      D    L  G+ L N  +         NA
Sbjct: 122 FGYYVPLQYGWAIDKLWALVIGLMLYNGSVLAEIFRAGINA 162


>gi|197105460|ref|YP_002130837.1| cystine ABC tranporter, permease protein [Phenylobacterium zucineum
           HLK1]
 gi|196478880|gb|ACG78408.1| cystine ABC tranporter, permease protein [Phenylobacterium zucineum
           HLK1]
          Length = 217

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 8/179 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +   L  IS   +  L  + +I   + ++F  P                  +  I L   
Sbjct: 47  RFAALRGISRTSVVVLRGIPIIVQLFYVYFVLPEF--------GLSLDAMWAGIIGLGVA 98

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            + + AE  R+G+ +V    +EAA +LG++     R V+LP A+R+ +PP  +  + LLK
Sbjct: 99  YSVYQAENFRAGIQSVDPALVEAARSLGMSEGMIMRRVILPLAIRTALPPFGNTSIMLLK 158

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SS+A  +  A+L   G  +   T Q + +  +   +YL++S+ +   ++RL  ++A +
Sbjct: 159 DSSIASTITVAELTRAGQLLAISTFQNMTVYTLIALLYLAMSLPLTFLVHRLEKRMARR 217


>gi|153800711|ref|ZP_01955297.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-3]
 gi|124123686|gb|EAY42429.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-3]
          Length = 222

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLLMT-VSIVMRTPVVHWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKK 215


>gi|157371561|ref|YP_001479550.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157323325|gb|ABV42422.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 234

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 94/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++    ++R       +    LY  T++  G P
Sbjct: 14  WSDGYRFTGVAVTLWLLISSVVMGGLLAI-PMAVARVSSITWVRFPVWLY--TYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   +F+  +          +AL+  T A+  EI    + +V 
Sbjct: 71  LYVQLLVFYSGMYSLEIVRGTDFL-NAFFRSGLNCTILALTLNTCAYTTEIFAGAIRSVS 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R+ +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 HGEIEAANAYGFSRFKMYRCIILPSALRTALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I   T Q      I   +YL +S  +     +   +
Sbjct: 190 RDINAATYQPFYAFGIAAVLYLIISYGLISLFRKAEKR 227



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 31/79 (39%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T WL  S ++   ++   +   R+S+   V +   +Y  +FR  P  V +   Y
Sbjct: 20  FTGVAVTLWLLISSVVMGGLLAIPMAVARVSSITWVRFPVWLYTYIFRGTPLYVQLLVFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + S+  +     +  F 
Sbjct: 80  SGMYSLEIVRGTDFLNAFF 98


>gi|154174248|ref|YP_001407878.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           curvus 525.92]
 gi|112803416|gb|EAU00760.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter curvus 525.92]
          Length = 236

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 17/233 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              +   LN    +    +      + +    +GI L      L +  + K    +   Y
Sbjct: 21  YYFYPTELNEIQRAAYLKSYGVTLGLTLGGICIGIALGFLLAFL-KFLNIKILSFIIDEY 79

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   ++ G P ++ + +             F+ +  +T S  F    IAL   ++A++AE
Sbjct: 80  ID--ILRGTPIILQLLI-------------FSVVIFATWSDNFYVAVIALGLNSSAYVAE 124

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG+ +V +GQMEAA A+GL++  + R ++ PQA+++I+P L +++++L K +S+   
Sbjct: 125 IVRSGINSVDKGQMEAARAMGLSYSASMREIIFPQAIKNILPALGNEFISLFKETSVVGY 184

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   D+     +          + +    +Y     +++     L  ++   +
Sbjct: 185 ISVMDITFQSKSFQAILYNPKPV-IFAGVVYYISVKILSFLTKTLEKRLNRHD 236



 Score = 36.8 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 34/82 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L  +  T  L   G+     +G L+   +    K++++I   Y+++ R  P ++ +  
Sbjct: 35  AYLKSYGVTLGLTLGGICIGIALGFLLAFLKFLNIKILSFIIDEYIDILRGTPIILQLLI 94

Query: 148 LYKSVLSVLPIPDHSIVLPFGM 169
               + +      +  V+  G+
Sbjct: 95  FSVVIFATWSDNFYVAVIALGL 116


>gi|42779788|ref|NP_977035.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42735705|gb|AAS39643.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 214

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 19/215 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   ++  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQILGILVEVVRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   V+LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHVILPQALRRMVPPLVSQFISLLKDTALAVVISLPELIHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLN 389
           I  Q     I   ++   +Y  ++  +++   RL 
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLE 212



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGILVEVVRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|322411919|gb|EFY02827.1| cystine transport system permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 216

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 14/226 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++L    L F    +     I + SFV G++L L    L R             Y+    
Sbjct: 4   IWLMKDSLGFVLSGLPYTLGISLLSFVTGLLLGLGLALLGRSRQRLI------HYLVRAY 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I  +  + +I + + L+F  P              P  +  Y+  S  +AA+I+E+ RS 
Sbjct: 58  ISIMRGVPMIVVLFVLYFGLPYY--------GLELPALLCAYLGFSMVSAAYISEVFRSS 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+ +GQ EAA ALGL +    + ++LPQA R  +PPL +  ++++K+SSLA  +   D
Sbjct: 110 IEAIDKGQWEAAKALGLPYSLMVKKIILPQAFRIAVPPLGNVIIDMVKSSSLAAMITVPD 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +      I  +    + + ++  FIY  ++ ++  +   L  K+AL
Sbjct: 170 IFQNSKIIGGREWDYMSMYILVAFIYWLIAFLLERYQEFLENKLAL 215


>gi|310814769|ref|YP_003962733.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753504|gb|ADO41433.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 264

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 8/243 (3%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
            F  +  +L V  +     V    ++          L +     +  FS   G  +    
Sbjct: 9   DFPYWLVILGVTGLWLFWRVATDDVYAGVLNTLSRGLGVTIMVTLIAFS---GGAVLGLG 65

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS---- 260
             L++       +    LY+       +  L+L      +     +        G     
Sbjct: 66  LALAQLSRSLILRQAARLYVEVMRGVPIMVLLLYVAFVGVPGMVALWNGLTGWTGIEPLR 125

Query: 261 -TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
               P      IAL    A+F+AE+ R+G+++V  GQ+EAA ALGL      R ++ PQA
Sbjct: 126 TRDVPLLWRAIIALLLAYASFLAEVFRAGILSVEVGQIEAAKALGLGRWHIFRHIVWPQA 185

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           MR+++PPL + ++ ++K+SSL   +G  D+  +         +  E   +   IYL+++I
Sbjct: 186 MRNVLPPLGNDFVAMVKDSSLVSVLGVTDITQLAKLTSASNFRYFETYNVVALIYLTVTI 245

Query: 380 MIA 382
            ++
Sbjct: 246 GLS 248


>gi|242238358|ref|YP_002986539.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130415|gb|ACS84717.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 218

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +           +       + S        L    L      K    L L  +   + 
Sbjct: 1   MMTFTDWDIVRNLLLAGRWTLLLSLAAFFGGGLVTLPLLLLRLTKRPWPLRLTRLYADVF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ +T+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLGLFGIDVSPWTAAALALTLFTSAFLVDIWHGSV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+P+GQ EA   LGLT  +    V+ PQAMR  I P     + ++K ++LA  +GF +L
Sbjct: 110 LALPKGQWEACRCLGLTFTQTLTRVVAPQAMRIAIAPTVGFSVQVIKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 170 TKAGTMLNNVTFQPFKVFGLVALGYFLLCYPLSYYSRYLEKKF 212


>gi|89898982|ref|YP_521453.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343719|gb|ABD67922.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 214

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 11/204 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                S +  I   L    L      K   A   +     +  G P L+ + L Y     
Sbjct: 19  WTAALSLIAFIGGGLVGLGLLMLRFAKLRGAATAVAWYVQIFQGTPLLMQLFLVY----- 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 F        +   ++  I L+ Y +A++ EI R  + A+P+GQ EA+ +L L  
Sbjct: 74  ------FGLALLGMDTSPLVAAAICLTLYASAYLTEIWRGCVNAIPKGQWEASTSLALNF 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+LPQA+   I P     + ++K ++LA  +GF +L   G  I N T Q     
Sbjct: 128 TQQMRHVILPQALHVAIAPTVGFLVQIIKGTALASVIGFVELTKAGQMISNATYQPFLAY 187

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           +    +Y +L   ++ +  RL  +
Sbjct: 188 IFVGLLYFALCYPLSWWSQRLENR 211


>gi|255659864|ref|ZP_05405273.1| polar amino acid uptake family ABC transporter, permease protein
           [Mitsuokella multacida DSM 20544]
 gi|260847943|gb|EEX67950.1| polar amino acid uptake family ABC transporter, permease protein
           [Mitsuokella multacida DSM 20544]
          Length = 235

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 104/226 (46%), Gaps = 7/226 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +    +        +     + +FS ++GI+L      ++    +      PLL I 
Sbjct: 4   YFDVGYMIKSFPTLLGMVHITLLVTIFSAIVGILLG---AAIAVLRIQCVPVIAPLLRIF 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV + L Y   F  P +     I    V P    +    + + AA+ AEI+
Sbjct: 61  ISFMRGTPFLVQLFLAY---FGVPEILAHVGISMKGV-PPLAFVLAVFTLHMAAYGAEIL 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RS ++AVP G+ EAA++LG+T  +  R V+LPQA +  +P L +  + ++K +SL   VG
Sbjct: 117 RSSILAVPVGEKEAAMSLGMTSFQMYRRVVLPQAFQMAMPALINTVIGVVKGTSLIFNVG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             D++     +   + +++E+ +    IY  L  +IA     L  +
Sbjct: 177 VVDIMRKAELMAGNSQRSLELYVDVAVIYGILIFLIARIGRFLERR 222


>gi|171057832|ref|YP_001790181.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170775277|gb|ACB33416.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 250

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRL--------SRHFHEKTGKALPLLYISTFLIFGL 232
           +T+            LG++  L ++          +     K  +   + Y++ F   G 
Sbjct: 21  MTIKLTLVAIGVGLALGVLFGLISSSRDAPRPRSAAAVLGMKLLRGFTVGYVTFF--RGT 78

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFI-------GGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           P  V I L +       +     ++               F S  +ALS    A+I+EI 
Sbjct: 79  PLFVQILLVHFALMPALIHPDHGWLLAGESARTFRQEHGAFFSGCLALSLNAGAYISEIF 138

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++ RGQ +AA +LG TH ++ R V+LPQA R ++P L ++ + L+K+SSL  A+G
Sbjct: 139 RAGIQSIHRGQTQAAYSLGFTHAQSMRFVVLPQAFRRMVPALVNEGVTLIKDSSLVSAIG 198

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            A+L     T+     +  E  L    IYL L++ ++    RL A
Sbjct: 199 LAELALAARTVAGAYSRYWEPYLAISLIYLILTLTLSTLAKRLEA 243



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 13/124 (10%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-------------NKLVAWICRV 131
           Y    + G + T  L    +     +G L G    S               KL+      
Sbjct: 11  YGPLFVEGILMTIKLTLVAIGVGLALGVLFGLISSSRDAPRPRSAAAVLGMKLLRGFTVG 70

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           YV  FR  P  V I  ++ +++  L  PDH  +L        R       +      +  
Sbjct: 71  YVTFFRGTPLFVQILLVHFALMPALIHPDHGWLLAGESARTFRQEHGAFFSGCLALSLNA 130

Query: 192 FSFV 195
            +++
Sbjct: 131 GAYI 134


>gi|13473618|ref|NP_105186.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14024368|dbj|BAB50972.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 269

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 12/207 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
                 F  + ++G+ ++L         R    F+ +  + +P+L +  ++ F       
Sbjct: 51  FVTVVAFAMASIIGLGVALMGLSGSPWLRQIARFYVEIIRGVPILVLLFWIAFAGAP--- 107

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            A     +     L    ++G   V          +AL+   +AFI+E+ R+G+ AV +G
Sbjct: 108 -AFVAAWNALTAPLQSAGYLGELLVRDVSLLWRAIMALTIGYSAFISEVFRAGIQAVEKG 166

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA ALGL+  +  RL++ PQA+R+I+PPL + ++ L+K+SSL   +G AD+  +G  
Sbjct: 167 QIEAAKALGLSRTQRFRLIVFPQAIRTILPPLGNDFVALVKDSSLVSVLGVADITQMGKI 226

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIA 382
               + +  E   I  +IYL L++ ++
Sbjct: 227 YAAGSFRFFETYSIVAYIYLILTVGLS 253



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)

Query: 82  DSSYATAIL---VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
              YA        G   T ++       A+IIG  V    LS +  +  I R YVE+ R 
Sbjct: 32  SDLYAQVFATVAKGIGITVFVTVVAFAMASIIGLGVALMGLSGSPWLRQIARFYVEIIRG 91

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +P LV++F++  +         +++  P         L    +++   A + +
Sbjct: 92  VPILVLLFWIAFAGAPAFVAAWNALTAPLQSAGYLGELLVRDVSLLWRAIMAL 144


>gi|293393702|ref|ZP_06638011.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
 gi|291423824|gb|EFE97044.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Serratia odorifera DSM
           4582]
          Length = 252

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 11/240 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +        +              S   G+  +L    ++            L    + 
Sbjct: 12  FLAEWLLEPQYLGWLWHGFLLTLWLSACAGLAATLLGLAIAALRDSPLPLLRGLAVAYSA 71

Query: 228 LIFGLPTLVLIALKYQLH---------FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L    P LV +   Y                   QF ++   +   EF++    L+ Y+A
Sbjct: 72  LFRNTPLLVQLFFWYFAAGQILPSTAMQWLNTPHQFGWLAWPSF--EFLAGCCGLTLYSA 129

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAE VRSG+  V  GQ +AA ALGLT  +A R V+LPQA+   +PPL  QY+NL+KNS
Sbjct: 130 AFIAEEVRSGIRGVAVGQKQAANALGLTGWQAMRHVVLPQALTIALPPLLGQYMNLIKNS 189

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SL +A+G A+L      +  +T +  +   +   +Y+++  ++  +      +   + K+
Sbjct: 190 SLTMAIGVAELSYASRQVETETLRTFQAFGVATLLYIAIIALLEGWGMWHQQRKPQRGKQ 249



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 2/168 (1%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q +  +  +  Y   +  GF+ T WL+    + AT++G  + A R S   L+  +   Y
Sbjct: 10  MQFLAEWLLEPQYLGWLWHGFLLTLWLSACAGLAATLLGLAIAALRDSPLPLLRGLAVAY 69

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
             +FRN P LV +FF Y +   +LP      +     F      SF  L       ++  
Sbjct: 70  SALFRNTPLLVQLFFWYFAAGQILPSTAMQWLNTPHQFGWLAWPSFEFLAGCCGLTLYSA 129

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +F+   V S    R      ++   AL L          LP  + IAL
Sbjct: 130 AFIAEEVRS--GIRGVAVGQKQAANALGLTGWQAMRHVVLPQALTIAL 175


>gi|229514204|ref|ZP_04403665.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TMA
           21]
 gi|229348184|gb|EEO13142.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TMA
           21]
          Length = 229

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F   G       F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFFITGEFIEISPFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAVVYLVITLITQRAVKVIDNKFSIQ 219


>gi|291286085|ref|YP_003502901.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290883245|gb|ADD66945.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 222

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 19/235 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             +L F     +R +    +T+         + V+ +V+ L     SR            
Sbjct: 1   MTLLEFLSEYGSRLIDGSLVTVLLTILASALAVVIAVVMGLMRMSRSRLISLPAA----- 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             +   +  G   LV +   Y + F  P+              +F + ++A+     A+ 
Sbjct: 56  --VYIEIFRGTSLLVQL---YWIFFVLPLF--------GVTFDKFTAGFVAVGMNLGAYG 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+VR  ++AVP+GQ EAA++LGL+  K    ++ PQA+  ++PP  +  + LLK ++L 
Sbjct: 103 AELVRGAILAVPKGQWEAALSLGLSPFKRMVRIIFPQALLIMLPPWGNLLIELLKGTALV 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLNAKIALK 395
             +  ADL+     I   T  + +     + IY  ++  M+   M      +A K
Sbjct: 163 SLISVADLMFESKQINASTFLSAQSFGCALIIYYIMARFMLTPTMRWFERVMARK 217



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 42/90 (46%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y + ++ G + T  L       A +I  ++G  R+S ++L++    VY+E+FR    L
Sbjct: 8   SEYGSRLIDGSLVTVLLTILASALAVVIAVVMGLMRMSRSRLISLPAAVYIEIFRGTSLL 67

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V +++++  +       D        + +N
Sbjct: 68  VQLYWIFFVLPLFGVTFDKFTAGFVAVGMN 97


>gi|153812543|ref|ZP_01965211.1| hypothetical protein RUMOBE_02942 [Ruminococcus obeum ATCC 29174]
 gi|149831468|gb|EDM86556.1| hypothetical protein RUMOBE_02942 [Ruminococcus obeum ATCC 29174]
          Length = 215

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 211 FHEKTGKALPLLYISTFLI---FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +  +  +  PL +I    I    G P ++ + L Y   F    +   N+        +F 
Sbjct: 36  YFGRVSRFKPLSWIVKAYISIMRGTPLMLQLLLWYFGPFYLWGMNIGNY--------KFT 87

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           ++ +  S   AA+ AEI RSG+ ++P GQ EAA  LG    +    ++LPQ ++ ++P +
Sbjct: 88  AIILGCSLNYAAYFAEIYRSGIESIPVGQYEAAQLLGYNKSQTFFKIVLPQVVKIVLPSV 147

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T++ + L+K++SL  +V + ++ ++   I       +   +I    Y   + ++A  M  
Sbjct: 148 TNEVITLVKDTSLVYSVSYIEMFALAKQIAAA-QTTVVPFVIAGVFYYIFNFVVAWVMEW 206

Query: 388 LNAKIALKE 396
              K+    
Sbjct: 207 FEKKLNYYR 215



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 34/73 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  GF  T  + F  ++ +  +G +V  GR+S  K ++WI + Y+ + R  P ++ +
Sbjct: 7   LQQLTTGFGQTLLIFFLTLLFSLPLGMVVYFGRVSRFKPLSWIVKAYISIMRGTPLMLQL 66

Query: 146 FFLYKSVLSVLPI 158
              Y     +  +
Sbjct: 67  LLWYFGPFYLWGM 79


>gi|81299059|ref|YP_399267.1| amino acid ABC transporter permease [Synechococcus elongatus PCC
           7942]
 gi|81167940|gb|ABB56280.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus elongatus PCC 7942]
          Length = 396

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 26/265 (9%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
             R +P L  + FL    L    +    +             S   LT+ T     V S 
Sbjct: 155 WLRFLPTLWGVLFLVGLWLLQGGLGLRPVSSND--------WSGLLLTLATALISMVCSL 206

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            LGI+L+L      R       + L + YI  F       L L+ + +      P++   
Sbjct: 207 PLGILLAL-----GRQSSLPAIRWLSVTYIELFR-----GLPLVTILFFGQVMVPLM--- 253

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +         +   + L+ + +A++AE VR GL A+P+GQ EAA ALGL   +  R +
Sbjct: 254 --LDSEWRIDRILRAIVGLTIFLSAYLAETVRGGLQAIPQGQFEAAAALGLNLFQTYRFI 311

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWM 371
           +LPQA+R  IP +   +LNLL++++L   VG  +L+ +  +I+      G+  E+ L   
Sbjct: 312 VLPQALRISIPAIVGLFLNLLQDTTLLSIVGLLELLGISRSILANPAYLGRYAEVYLFLG 371

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            +Y      +A    RL  ++  + 
Sbjct: 372 VLYWLCCYGLAQLSRRLEQRLTPQR 396


>gi|323698839|ref|ZP_08110751.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458771|gb|EGB14636.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 227

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 14/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + +           +     +     + G+   L      R  + K  +A   LY++
Sbjct: 1   MFDVSIILEYYPLFLKGLVYTVLVCAAGILGGLAWGLVLYAAGRA-NLKFLRAACRLYVN 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P LV + L   L +  P+                 +  + L+ Y  A+ AEI 
Sbjct: 60  IF--RGTPLLVQLFL---LFYGGPLF--------GLRLSAIATGILGLAAYGGAYFAEIY 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G  ++P GQ+EAA  LGL+  +  R + LPQ +  I+PPLT+Q + ++K S++   + 
Sbjct: 107 RAGFQSIPPGQIEAARDLGLSRWQIVRHIQLPQMLTLILPPLTNQAIIIVKESAILSIIT 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L +    +   T   +E  L+    Y  +   I++      A+
Sbjct: 167 VPELTTAAVKVSTTTFSIVEPYLLLAAAYWLIVQGISMGGRAWEAR 212



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 34/88 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G V T  +  +G++     G ++ A   +  K +   CR+YV +FR  P LV 
Sbjct: 10  YYPLFLKGLVYTVLVCAAGILGGLAWGLVLYAAGRANLKFLRAACRLYVNIFRGTPLLVQ 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +F L+                  G+   
Sbjct: 70  LFLLFYGGPLFGLRLSAIATGILGLAAY 97


>gi|294793251|ref|ZP_06758397.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Veillonella sp. 6_1_27]
 gi|294456196|gb|EFG24560.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Veillonella sp. 6_1_27]
          Length = 238

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +    +        +     I V S +LG++L      + R         L +++IS
Sbjct: 4   YFDVSYMIQAFPQLLNYVHVTVLITVISAILGVILGSII-AIIRLKKVPVLNQLFIVFIS 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P LV + L Y    +      FN        P  + +Y   + + A + AEI+
Sbjct: 63  F--MRGTPFLVQLFLIYFGVPEIMSHMGFN----MRNVPGLVFVYAVFTLHIAGYSAEIM 116

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RS + AV  G+ EAA +LG+T  ++   ++LPQA    IPPLT+  + +LK ++L   VG
Sbjct: 117 RSSIDAVAPGEKEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVG 176

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             D++     +   + + +E+ +    IY  L I+++L    L  +  +  K+
Sbjct: 177 VVDMMRKADLMGGNSQRYLELFVDAAIIYGILIIIVSLLGRLLERRFTVAGKE 229



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +     I   I+G+++   RL    ++  +  V++   R  P LV +F +Y  V  +
Sbjct: 24  TVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVFISFMRGTPFLVQLFLIYFGVPEI 83

Query: 156 LPIPDHSIVLPFGMFL 171
           +     ++    G+  
Sbjct: 84  MSHMGFNMRNVPGLVF 99


>gi|322390821|ref|ZP_08064331.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142491|gb|EFX37959.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 230

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 113/236 (47%), Gaps = 8/236 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++ + +      L      +     + V + VLG    L  T  ++   +K G  L   Y
Sbjct: 1   MVSYDISKVWSFLPTLVQALPATLALMVLTTVLGSAFGLVLT-WAQVSEDKVGAGLAKGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T           I L + + +  P    +          +F+ + +A+    AA I+E
Sbjct: 60  VFTLRCTPP-----IVLLFLVFYGLPQFLNWWLGVDIDHWSKFVFVLVAMFLLFAAMISE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + ++  +A+P+GQMEA +++GLT  +    ++LPQA R  +P +T+  LNL+++++LA  
Sbjct: 115 VFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYT 174

Query: 344 VGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GF D++  G  +I++     ++E       IY  ++++I+     L  ++++ E+
Sbjct: 175 IGFIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIALVISFSAQLLEKRLSVTER 230


>gi|163858457|ref|YP_001632755.1| putative ABC-type amino acid transporter, permease component
           [Bordetella petrii DSM 12804]
 gi|163262185|emb|CAP44487.1| putative ABC-type amino acid transporter, permease component
           [Bordetella petrii]
          Length = 231

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 9/230 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLG-IVLSLFATRLSRHFHEKTGKALPLLYISTF 227
                  L       +     F  + +L  + L+            +T  + PL ++S+ 
Sbjct: 4   FLHTYGMLFLVGSWPNGPIGGFAGTLILAALGLAGAFPAALVIGVARTSGSAPLKWLSSA 63

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +     + LI + +  +F  PV+  F         P F +   A+  Y +AF+AEIVR+
Sbjct: 64  WVHTFRAIPLIMIVFWAYFLLPVMIGFEV-------PPFSTALAAIIVYESAFLAEIVRA 116

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +VP GQ+EAA A+GL + +    V LPQA+ ++IP L +Q+++ +K +S+   +G  
Sbjct: 117 GIQSVPAGQVEAARAVGLGYFQTLWSVQLPQALSNMIPSLVNQFVSTIKATSIVYIIGVQ 176

Query: 348 DLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +       I +     A+   L+    Y  L  +++    RL   +  K 
Sbjct: 177 EAAFSAQQINSIELTGALRTYLVLALFYFLLCALLSRLARRLELHLQHKR 226



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 2/169 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T  LA  G+  A     ++G  R S +  + W+   +V  FR IP ++++F+ Y  
Sbjct: 24  GFAGTLILAALGLAGAFPAALVIGVARTSGSAPLKWLSSAWVHTFRAIPLIMIVFWAYFL 83

Query: 152 VLSVLPI--PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
           +  ++    P  S  L   +   +  L+        +           + L  F T  S 
Sbjct: 84  LPVMIGFEVPPFSTALAAIIVYESAFLAEIVRAGIQSVPAGQVEAARAVGLGYFQTLWSV 143

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
              +     +P L           ++V I    +  F    +      G
Sbjct: 144 QLPQALSNMIPSLVNQFVSTIKATSIVYIIGVQEAAFSAQQINSIELTG 192


>gi|90578869|ref|ZP_01234679.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio angustum S14]
 gi|90439702|gb|EAS64883.1| ABC-type arginine/histidine transport system, permease component
           [Vibrio angustum S14]
          Length = 223

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N +        + T+ ++ V S ++G  L+L  T ++          L    I+ F   
Sbjct: 1   MNEQHFWQLLDGLATSLQLTVASLLVGCTLALLMT-MTLILRTPVLHWLSRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y     +    + +F+      P F    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLIYYGP-GQFEGIRDSFVWQWLSQPWF-CAMLALALNTAAYSTQLFKGAFD 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ +A  ALG+   K T   LLP A+R  +P  +++ + + K +SLA  +   D++
Sbjct: 116 AIPKGQWQACRALGM-ETKTTLSTLLPFAIRRSVPAYSNEVILVFKGTSLASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I   +YL+++ ++++    +  K
Sbjct: 175 GYAQRINAQTYDTLTVFAIAGAMYLTVNALLSIAFRLIEKK 215



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           +  +   +L G   +  L  + ++    +  L+    +    ++ W+ R  + +F   P 
Sbjct: 2   NEQHFWQLLDGLATSLQLTVASLLVGCTLALLMTMTLILRTPVLHWLSRGIITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I D  +            L+    T   + ++F  +F
Sbjct: 62  LVQIFLIYYGPGQFEGIRDSFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|259046945|ref|ZP_05737346.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Granulicatella adiacens ATCC 49175]
 gi|259036388|gb|EEW37643.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Granulicatella adiacens ATCC 49175]
          Length = 218

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 19/230 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L + + +    L     T++  A + +FS  LGI+++            K      L++
Sbjct: 5   NLSYSLEILPSLLHGAVTTLEVFALVLIFSIPLGILIAFAM-------QLKWKPLNWLIH 57

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  +++ G P L+ +   Y +                       +  IA +   AA+ AE
Sbjct: 58  IYIWVMRGTPLLLQLIFIYYV-----------LPSVGIRLDRLPAALIAFTLNYAAYFAE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+  +P+GQ EAA  L  T     R ++LPQ  + ++P + ++ ++L+K++SL  A
Sbjct: 107 IFRGGIDTIPKGQYEAAKVLKFTPGATIRYIVLPQVTKIVLPSVFNEIMSLVKDTSLVYA 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +G +DL+    T  N+    + + L    IYL +  ++ L   R+  K +
Sbjct: 167 LGISDLILASRTAANRDASLVPMFL-AGAIYLIVIGVVTLVAKRIEKKFS 215



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 35/85 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    +I +  +G L+        K + W+  +Y+ V R  P L+ + F+
Sbjct: 16  LLHGAVTTLEVFALVLIFSIPLGILIAFAMQLKWKPLNWLIHIYIWVMRGTPLLLQLIFI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV    D          LN 
Sbjct: 76  YYVLPSVGIRLDRLPAALIAFTLNY 100


>gi|291326464|ref|ZP_06124625.2| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
 gi|291314318|gb|EFE54771.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
          Length = 226

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 6/229 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  F        + F        AKI + + V+GI+       + R    K       L
Sbjct: 1   MMYEFDWSSIAPSMPFLIDGFIVTAKITLTAIVVGILWGTVL-AVMRLSTFKPISWFAAL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++TF       LV++ L + L    P L Q             +S  IA S + AA+ +
Sbjct: 60  YVNTFRSIP---LVMVLLWFYL--IVPSLLQNVLGLSPKNDIRLISAMIAFSLFEAAYYS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++ RGQ  AA+ALG+T+ +  RLV+LPQA ++++P L +Q + L ++SSL  
Sbjct: 115 EIIRAGIQSISRGQASAALALGMTNMQTMRLVVLPQAFKAMVPLLLTQGIVLFQDSSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   D       I  + G  +E++L    +Y  +S   ++ +N L  +
Sbjct: 175 VLSLTDFFRTATNIGERDGTQVEMVLFAGLVYFIVSFGASMLVNYLKKR 223



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 39/67 (58%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ GF+ T  +  + ++   + GT++   RLS  K ++W   +YV  FR+IP ++V+ + 
Sbjct: 17  LIDGFIVTAKITLTAIVVGILWGTVLAVMRLSTFKPISWFAALYVNTFRSIPLVMVLLWF 76

Query: 149 YKSVLSV 155
           Y  V S+
Sbjct: 77  YLIVPSL 83


>gi|206978167|ref|ZP_03239049.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
 gi|206743639|gb|EDZ55064.1| amino acid ABC transporter, permease protein [Bacillus cereus
           H3081.97]
          Length = 214

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 109/217 (50%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L I   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYMKIPVVSQILGIIVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITATIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK+++LAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTALAVVISLPELIHNAQI 177

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I  Q     I   ++   +Y  ++  +++   RL  +
Sbjct: 178 ISGQNVNYMIPTFIVVACMYFIVNYSLSILSRRLELR 214



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ I  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYMKIPVVSQILGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|254284661|ref|ZP_04959628.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|150425446|gb|EDN17222.1| amino acid ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
          Length = 298

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 59/229 (25%), Positives = 108/229 (47%), Gaps = 10/229 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALP-LLYIS 225
              L     T+  +    V + VLG ++ +      +  RL  +   +  + +P L+++ 
Sbjct: 63  PYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVF 122

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    L+ +    +L   H  +         G + +    +S  + +   ++A+IA
Sbjct: 123 IFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSAYIA 182

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL  +P+GQ EAA +LGL      R V+ PQ + +I P L  Q ++L+K++S+  
Sbjct: 183 EIVRAGLANIPQGQWEAADSLGLPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIIS 242

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L  VG  I N +G   EI LI    YL L + +++   ++  +
Sbjct: 243 LISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLSLSMLFKQVEKR 291



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 22/216 (10%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
                +   L L +  +  W          +S + +   +    A       ++      
Sbjct: 12  YRFTLLDGGLLLAIASLIGWLYY-------RSEVGIHYQWYWREA-----WTLIFTPRAD 59

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
                 L G   T  L+  GM+ A ++G+L+G  R      V      +V++ RNIPPLV
Sbjct: 60  GSLPYFLQGLGATLRLSLWGMVLALVLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLV 119

Query: 144 VIFFLYKSVL----------SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
            +F  Y  +            +L      +            L    L+      +   +
Sbjct: 120 FVFIFYFFISNQLIPLLGLDELLRDHTAEVHPLITWLFGPARLWENLLSGVLCIGLLSSA 179

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           ++  IV +  A      +       LP      ++I
Sbjct: 180 YIAEIVRAGLANIPQGQWEAADSLGLPTWVKYRYVI 215


>gi|91225769|ref|ZP_01260798.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91189658|gb|EAS75933.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 222

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++   S V+G +L+L  T        +T     +      L  
Sbjct: 1   MNEQHVWQMLDGLGTSLQLTAASLVVGCLLALMMTL---TLILRTPGLHWVSRGIITLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +  F   + +S  +    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDAVRESVF--WTWLSQPWFCAMLALALNTAAYSTQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPSGQWQACRALGMNKTATL-KVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLTVFGIAGAFYLAVNGVLTLIFRQVEKK 215


>gi|66043566|ref|YP_233407.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254273|gb|AAY35369.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330971846|gb|EGH71912.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 215

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R   +   +    LYI  F   G P L+ + L +           F           + +
Sbjct: 41  RTSEKSGPRVTAKLYIELF--QGTPLLMQLFLVF-----------FGVALMGLNISPWAA 87

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +T+A++AEI R  + ++ +GQ EA+ +L LT  +  R V+LPQA+R  + P  
Sbjct: 88  AALALTLFTSAYLAEIWRGCVESISKGQWEASASLALTPFEQMRYVILPQALRIAVAPTV 147

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K +++   +GF +L   G  + N T +   +       Y  L   ++L    L
Sbjct: 148 GFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHL 207

Query: 389 NAKI 392
             ++
Sbjct: 208 ERRL 211


>gi|222083301|ref|YP_002542704.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221738681|gb|ACM39519.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 226

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 11/230 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  N + L    L +     + V S+++ I   +    + R    ++  A    +I    
Sbjct: 3   ILTNPQYLGEIALGLKMTVILAVASWLIAIGSGILL-AIIRVSAPRSIDAAAAAWIE--Y 59

Query: 229 IFGLPTLVLIALKYQ---LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              +P +V I   Y      F  P    FN   G  +        +A+  Y  A+I E +
Sbjct: 60  QRNVPVIVHIFAWYFGVSTIFPLPAQDWFNANNGDVIF-----AAVAIGLYYGAYICEDI 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG  ++ RGQ EAA ++GL  R++   V++PQA+R+ +P L S+ + LLK++SLA+ +G
Sbjct: 115 RSGYRSISRGQYEAARSIGLNFRQSLHHVMMPQAVRASLPALISRAILLLKSTSLAMVIG 174

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +L      I N+T    +   I   IYL LS+ + L        + + 
Sbjct: 175 VMELTYQTKEIQNETFLTFQAFSIATIIYLVLSMAVILLGKVTEHYMEVG 224



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I +G   T  LA +  + A   G L+   R+SA + +      ++E  RN+P +V
Sbjct: 8   QYLGEIALGLKMTVILAVASWLIAIGSGILLAIIRVSAPRSIDAAAAAWIEYQRNVPVIV 67

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
            IF  Y  V ++ P+P    
Sbjct: 68  HIFAWYFGVSTIFPLPAQDW 87


>gi|126737044|ref|ZP_01752779.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Roseobacter sp. SK209-2-6]
 gi|126721629|gb|EBA18332.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Roseobacter sp. SK209-2-6]
          Length = 432

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 113/258 (43%), Gaps = 19/258 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++  L    +    IP+ +        + +R L    L M         S  LGI L+L 
Sbjct: 190 LVAALVVWKVGGFLIPEGASENAMLSSVPSRDLGGFMLNMMLGVTCVSLSVPLGIALAL- 248

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       K + +++I       L TL+ +A     +F  P              
Sbjct: 249 ----GRQSSMPLIKWICVIFIEFVRGVPLITLLFVASVMLSYFFPP----------DATV 294

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F+ + I ++ ++AA+IAE++R GL A+P GQ EAA +LGL + +A RL++LPQA++  
Sbjct: 295 DLFLRVVIMITLFSAAYIAEVIRGGLAALPTGQYEAADSLGLDYPQAMRLIILPQALKIS 354

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGG----TIINQTGQAIEIILIWMFIYLSLSI 379
           IP + +  + L K+++L   +   DLV +            G   E++    F++  +  
Sbjct: 355 IPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELLGFAAFLFFIVCY 414

Query: 380 MIALFMNRLNAKIALKEK 397
            I+ +   L  ++A   +
Sbjct: 415 GISQYSQWLERRLATGHR 432


>gi|116751317|ref|YP_848004.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
 gi|116700381|gb|ABK19569.1| binding-protein-dependent transport systems inner membrane
           component [Syntrophobacter fumaroxidans MPOB]
          Length = 224

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 14/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +F+    L      +  +  +   S   G+ + +      R +  +    L  LY+
Sbjct: 1   MEDLLFVRTDVLPAFLKGLKVSLLLIAPSAFFGLCIGILVGA-CRVYGSRLVILLSDLYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F   G+P +V + + Y   F  P L  +           F++  +  S  + A+ +E 
Sbjct: 60  ALF--RGVPLVVQLFVWY---FGLPHLKIY--------LSPFVASVLGFSLCSGAYHSEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L+++ +GQM AA ALG +  +    V+LPQA+R  +P   ++ + L+K SSLA  V
Sbjct: 107 IRGALLSIRKGQMLAAQALGFSKLRMVLSVILPQALRRALPGCGNEIIYLIKYSSLAYMV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +L      + + + +   + L    +YL L  + +  ++ +  K++L
Sbjct: 167 TCIELTGEAKILASHSFKYTIVFLSVGIVYLFLVSLASWLLHHIEDKVSL 216



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 5/172 (2%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   +  L          IG LVGA R+  ++LV  +  +YV +FR +P +V +F 
Sbjct: 14  AFLKGLKVSLLLIAPSAFFGLCIGILVGACRVYGSRLVILLSDLYVALFRGVPLVVQLFV 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVLSLFA 204
            Y  +  +       +    G  L +       +     +      + +  LG   S   
Sbjct: 74  WYFGLPHLKIYLSPFVASVLGFSLCSGAYHSEYIRGALLSIRKGQMLAAQALG--FSKLR 131

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
             LS    +   +ALP        +    +L  +    +L  +  +L   +F
Sbjct: 132 MVLSVILPQALRRALPGCGNEIIYLIKYSSLAYMVTCIELTGEAKILASHSF 183


>gi|170017622|ref|YP_001728541.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
 gi|169804479|gb|ACA83097.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
          Length = 213

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 19/230 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    LS   +T+       V S  LGI++SL            T + L   YI
Sbjct: 1   MNYFLNILPSLLSGLKMTLGVFFLTIVGSVPLGIIVSLGM-----KSEYFTIRWLINGYI 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y                     P F +  IA      A++AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYY-----------GLGMMGITFPRFEAAAIAFIINYGAYLAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL AVPRGQ +AA  LGL   +    ++LPQ ++ ++P   ++ +NL+K++SL   +
Sbjct: 103 FRGGLQAVPRGQYDAAKVLGLNKVQTFFKIILPQVIKIVVPSFGNEIINLVKDTSLVYVI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D++  G    ++    +   L+   IYL ++ ++ + + +  +++ +
Sbjct: 163 GLGDILRAGNIAASRD-VTLVPYLLVGMIYLLMTAIVTVLLKQSESRLNI 211



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 36/104 (34%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +   ++L G   T  + F  ++ +  +G +V  G  S    + W+   Y+ + R  P L+
Sbjct: 6   NILPSLLSGLKMTLGVFFLTIVGSVPLGIIVSLGMKSEYFTIRWLINGYIWIMRGTPLLL 65

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            + F+Y  +  +               +N              A
Sbjct: 66  QLIFVYYGLGMMGITFPRFEAAAIAFIINYGAYLAEIFRGGLQA 109


>gi|116617263|ref|YP_817634.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096110|gb|ABJ61261.1| amino acid ABC transporter membrane protein, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    + +      + +  +T+       + + VLG +++L         H K       
Sbjct: 2   NFDWHYFVNTFPELVKYIPMTLLLAILSMLLAIVLGGIITLLHF-----SHYKVIHWFAS 56

Query: 222 LYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +Y+S F   G+P LV + L Y  L    P+             P  ++  I L    +A+
Sbjct: 57  IYVSFF--RGMPALVQLFLIYYGLPQIFPIFKGL---------PAIIATVIGLGFKQSAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E+ R+ + +V RGQ+EA  +L +   K  R V+LPQA  + +P   + ++ LLK +SL
Sbjct: 106 LSEVFRAAVNSVDRGQIEAGQSLNIKSFKIFRYVILPQAFINALPATGNTFVGLLKETSL 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           A  +G  ++ + G  +   + +  E  L     Y  L I+ +   + +  
Sbjct: 166 AFTLGITEVFAEGKMLAGDSFKYFETYLAVGLTYWVLIILYSWAQSGVER 215



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA   M+ A ++G ++     S  K++ W   +YV  FR +P LV +F +Y  +  +
Sbjct: 22  TLLLAILSMLLAIVLGGIITLLHFSHYKVIHWFASIYVSFFRGMPALVQLFLIYYGLPQI 81

Query: 156 LP 157
            P
Sbjct: 82  FP 83


>gi|324112657|gb|EGC06633.1| His/Glu/Gln/Arg/opine family protein amino ABC transporter
           [Escherichia fergusonii B253]
 gi|325496803|gb|EGC94662.1| arginine transporter permease subunit ArtM [Escherichia fergusonii
           ECD227]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 102/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + + S ++ ++L+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELMKGLHTSLTLTIASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTIASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|302866035|ref|YP_003834672.1| polar amino acid ABC transporter inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|302568894|gb|ADL45096.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
          Length = 291

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 21/260 (8%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            + +I F+                      +    L+    T+   A   V + + G   
Sbjct: 30  IVALIVFVVYKFNQTGQFEARKWEQFQYAAVQRELLNGLWATLKVAAVATVLALLFGAFF 89

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +      +R   +   +A     +  F    L  L+       L +  P+          
Sbjct: 90  A-----SARLSDKVLFRAPATFVVELFRAIPLLILIFFGYYVPLQYGWPI---------- 134

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               +F +L I L+ Y  + +AEI R+G+ AVP GQ E A A+G+   +  RL+LLPQA 
Sbjct: 135 ---DKFWALVIGLTLYNGSVLAEIFRAGINAVPYGQSEGAYAIGMRKNQVLRLILLPQAF 191

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSL 377
           RS++P + SQ + LLK+++L   + + +L+ VG  I  +       +   LI   IY+S+
Sbjct: 192 RSMLPAIVSQLVVLLKDTALGFIITYPELLFVGKQIGGRLAFGLPYVPTYLIVAAIYISI 251

Query: 378 SIMIALFMNRLNAKIALKEK 397
             ++++    L  ++    +
Sbjct: 252 CGLLSVLAWWLQKRLTRLPR 271



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 85/274 (31%), Gaps = 30/274 (10%)

Query: 14  SRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           S    LYD      R  N  + I+    +  + ++ V                   ++  
Sbjct: 2   SSSSVLYDIPGPKARRRNRILGIVSIAAIVALIVFVVYK----------------FNQTG 45

Query: 69  GFEIDQGIVPYTSDSSYA---TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
            FE  +          YA     +L G   T  +A    + A + G    + RLS   L 
Sbjct: 46  QFEARKW-----EQFQYAAVQRELLNGLWATLKVAAVATVLALLFGAFFASARLSDKVLF 100

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
                  VE+FR IP L++IFF Y   L      D    L  G+ L N  +         
Sbjct: 101 RAPATFVVELFRAIPLLILIFFGYYVPLQYGWPIDKFWALVIGLTLYNGSVLAEIFRAGI 160

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQL 244
           NA  +  S     +       L      +  ++ LP +     ++     L  I    +L
Sbjct: 161 NAVPYGQSEGAYAIGMRKNQVLRLILLPQAFRSMLPAIVSQLVVLLKDTALGFIITYPEL 220

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            F    +G     G   V    +   I +S    
Sbjct: 221 LFVGKQIGGRLAFGLPYVPTYLIVAAIYISICGL 254


>gi|167766390|ref|ZP_02438443.1| hypothetical protein CLOSS21_00895 [Clostridium sp. SS2/1]
 gi|167711799|gb|EDS22378.1| hypothetical protein CLOSS21_00895 [Clostridium sp. SS2/1]
 gi|291560833|emb|CBL39633.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SSC/2]
          Length = 218

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 96/210 (45%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F  + + G++L +    +++    K       +     ++ G P ++ +   Y  +F
Sbjct: 23  LILFFLTLIFGLILGMI---IAKGRMSKLLIIQMPIRFFLLIMRGTPLILQL---YGFYF 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +   +            +  I  S   AA+ AEI RSG+ A+P+GQ EAA  LG  
Sbjct: 77  GLYYIAGLSL-------DRMTAAVIGFSLNYAAYFAEIYRSGIQAIPKGQYEAAKVLGFN 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++LPQ ++ I P L S+ + L+K++SLA  +G  ++  V    + ++ + +  
Sbjct: 130 RSQTFFKIILPQVVKIITPSLGSECMTLVKDTSLAHVIGVMEIYVVATNQMARS-RGMIY 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++    YL ++ +++   + +  ++    
Sbjct: 189 LVVAGIFYLIMNAIVSKVFSVIEKRMNYYR 218


>gi|157693149|ref|YP_001487611.1| glutamine ABC transporter membrane protein [Bacillus pumilus
           SAFR-032]
 gi|157681907|gb|ABV63051.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 216

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L+F         K+   S +L  ++ L    L      +  +   L  I
Sbjct: 1   MDFLGAYQPDHLAFLLEGFAVTLKVAFISIILSFLIGLVIGTL------RFAQIPILSKI 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++  +  L L+ + +  +F  P +G    I          S   AL+ + +A ++EI
Sbjct: 55  LAVVVETIRNLPLLLIIFFTYFALPEIGIKLSIT--------ASAIAALTVFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL ++ +GQ+EAA + G T+ +  +++++PQA+R ++PP+ SQ+++LLK++SLAV +
Sbjct: 107 IRSGLKSIDKGQIEAARSSGFTYIQTLKMIIMPQALRRMVPPIVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +L+     +  Q+    + I L+   +Y  ++  ++L   RL  + A
Sbjct: 167 ALPELLHHAQILNGQSQSYLLPIFLLAAMMYFVVNFSLSLLARRLEYRQA 216



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 73/198 (36%), Gaps = 10/198 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L GF  T  +AF  +I + +IG ++G  R +   +++ I  V VE  RN+P L++
Sbjct: 11  HLAFLLEGFAVTLKVAFISIILSFLIGLVIGTLRFAQIPILSKILAVVVETIRNLPLLLI 70

Query: 145 IFFLYKSVLSVLPI---------PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           IFF Y ++  +                        +   GL          A+   F+++
Sbjct: 71  IFFTYFALPEIGIKLSITASAIAALTVFESAMLSEIIRSGLKSIDKGQIEAARSSGFTYI 130

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
             + + +    L R       + + LL   S  ++  LP L+  A          +L  F
Sbjct: 131 QTLKMIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELLHHAQILNGQSQSYLLPIF 190

Query: 255 NFIGGSTVSPEFMSLYIA 272
                      F    +A
Sbjct: 191 LLAAMMYFVVNFSLSLLA 208


>gi|70732345|ref|YP_262101.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68346644|gb|AAY94250.1| amino acid ABC transporter, permease protein VC1862 [Pseudomonas
           fluorescens Pf-5]
          Length = 237

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 3/223 (1%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F+ +  L         + +I   +FVLG+ + L    + +    +    L  +Y  T L
Sbjct: 10  LFVADGWLGALAQGALVSLQISAGAFVLGLGIGLLV-AMIKLKGPRWLVKLANVY--TTL 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              +P L+LI L Y    D   +        S     F++  + L     A+ AEI+R  
Sbjct: 67  YRAMPELLLILLLYYAGTDLLNMAMAAMDRPSVTVNGFIAAVLVLGIVQGAYSAEIIRGA 126

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P GQ+EAA A G+      R +LLP  +   +  L++ +L L+K+S+L   VG+++
Sbjct: 127 IQAIPHGQIEAARAYGIERWLLVRRILLPSMLPYAMAGLSNLWLVLVKDSALISIVGYSE 186

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+SVG      T   +   L     Y  ++++       L  +
Sbjct: 187 LLSVGKQAAGSTKHYLVFYLAVAAFYFVITLVSGSVFRVLERR 229


>gi|37676943|ref|NP_937339.1| arginine transporter permease subunit ArtM [Vibrio vulnificus
           YJ016]
 gi|37201487|dbj|BAC97309.1| arginine ABC transporter, permease protein [Vibrio vulnificus
           YJ016]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +      +T            L  G P
Sbjct: 4   QHLWQLLEGLVTSLELTAVSLLVGCILSLLMTAM---LILRTPLLHWFSRSVITLFTGTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        +   +F+      P F    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLIYYGPGQFEAIRD-SFVWQWLSQPWF-CAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKLVTL-KVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGVAGAFYLTINAIMTLIFRQVEKK 215



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G V +  L    ++   I+  L+ A  +    L+ W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLVTSLELTAVSLLVGCILSLLMTAMLILRTPLLHWFSRSVITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I D  +            L+    T   + ++F  +F
Sbjct: 62  LVQIFLIYYGPGQFEAIRDSFVWQWLSQPWFCAMLALALNTAAYSTQLFKGAF 114


>gi|322691616|ref|YP_004221186.1| glutamate ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456472|dbj|BAJ67094.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 366

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 114/274 (41%), Gaps = 21/274 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +   +F  +  L+++              +            +  L    +
Sbjct: 21  IRIVNWIAGI---LFAVVLVLILMRLHNPPDGENQLSWELWKPAVEREAWTDFYLPGLWM 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+       V + V G+V  +      R       + +  + +       +  L++   +
Sbjct: 78  TIKATIVAVVGAVVFGLVFGV-----GRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTETQSLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +++   IY     +++     L +++  +
Sbjct: 240 NILQTLVMAAVIYFIACWLLSRLAEWLPSRMQQR 273



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  +  V V
Sbjct: 56  ELWKPAVEREAWTDFYLPGLWMTIKATIVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|264680313|ref|YP_003280223.1| glutamate/aspartate transporterpermease gltJ [Comamonas
           testosteroni CNB-2]
 gi|299532721|ref|ZP_07046109.1| glutamate/aspartate transport systempermease protein gltJ
           [Comamonas testosteroni S44]
 gi|262210829|gb|ACY34927.1| glutamate/aspartate transport systempermease protein gltJ
           [Comamonas testosteroni CNB-2]
 gi|298719356|gb|EFI60325.1| glutamate/aspartate transport systempermease protein gltJ
           [Comamonas testosteroni S44]
          Length = 250

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 10/225 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   +   L +          + + S V+ +VL      L           L   ++  
Sbjct: 22  FGKNGDITYLDWMMSAWGWTVSVALLSLVIALVLGAVIGTLRTLPDRPWIVRLGNAWVEL 81

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV + + Y                     P F+ +  A+  +T+A IAE VR
Sbjct: 82  F--RNIPLLVQVFIWY--------HVVPAIFPAMKSLPGFVLVVFAIGFFTSARIAEQVR 131

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ A+PRGQ  A +A+G T  +  R VLLP A R IIPPLTS+ +N+ KNSS+A AV  
Sbjct: 132 SGIQALPRGQRYAGMAVGFTTFQTYRYVLLPMAFRIIIPPLTSEAMNVFKNSSVAFAVSV 191

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A+L         +T + +EI +    +Y+  + +I   M  +  +
Sbjct: 192 AELTMFAMQAQEETARGVEIYMAVTGLYVISAFIINRIMAFIEKR 236



 Score = 53.0 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWIC 129
           E+ Q       D +Y   ++  +  T  +A   ++ A ++G ++G  R       +  + 
Sbjct: 16  EVGQSCFGKNGDITYLDWMMSAWGWTVSVALLSLVIALVLGAVIGTLRTLPDRPWIVRLG 75

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
             +VE+FRNIP LV +F  Y  V ++ P           +F
Sbjct: 76  NAWVELFRNIPLLVQVFIWYHVVPAIFPAMKSLPGFVLVVF 116


>gi|260463004|ref|ZP_05811207.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259031125|gb|EEW32398.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 224

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S VLG VL      L R    +    +   ++   LI G P LV I L +  
Sbjct: 22  MTVVLSLISLVLGTVLGFGLGIL-RTGGNRLIAGVIGAWVD--LIRGTPFLVQIFLIF-- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F +  IAL+   A FI EIV +G+ +VP GQ+EAA+A G
Sbjct: 77  ---------FILPEFGVELDAFTAGIIALTNLAACFICEIVVAGIRSVPTGQVEAALASG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  R V+LPQAMR ++PPL  QY+ L+K+SS+  A+G  DL  VG  ++ +    +
Sbjct: 128 LSRWQRLRQVVLPQAMRIVLPPLVGQYVLLIKDSSVVSAIGLTDLTRVGWLVVQRVPNGL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +  +    Y  +   + +   RL  ++ 
Sbjct: 188 LVFFLVGVGYFIVCYPLIMLARRLERRMG 216



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 33/66 (50%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+   ++  T++G  +G  R   N+L+A +   +V++ R  P LV IF ++
Sbjct: 17  LRGLGMTVVLSLISLVLGTVLGFGLGILRTGGNRLIAGVIGAWVDLIRGTPFLVQIFLIF 76

Query: 150 KSVLSV 155
             +   
Sbjct: 77  FILPEF 82


>gi|225870676|ref|YP_002746623.1| transport system membrane protein [Streptococcus equi subsp. equi
           4047]
 gi|225700080|emb|CAW94151.1| transport system membrane protein [Streptococcus equi subsp. equi
           4047]
          Length = 217

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 11/174 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+     ++ G+P +V++ + Y           F            +  Y+  S  +AA+
Sbjct: 53  LVRSYVSIMRGVPMIVVLFVLY-----------FGLPYYGLELSALLCAYLGFSLVSAAY 101

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I+E+ R+ + A+ +GQ EAA ALGL +    + V+LPQA R  IPPL +  ++++K+SSL
Sbjct: 102 ISEVFRASIDAIDQGQWEAARALGLPYVSIVKHVILPQAFRIAIPPLGNVVIDMVKSSSL 161

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +   D+      I  +    + + ++  FIY  ++ ++      L  ++ L
Sbjct: 162 AAMITVPDIFQKAKIIGGREWDYMSMYILVAFIYWVIAFLLERCQGFLEKRLRL 215


>gi|182438504|ref|YP_001826223.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326779150|ref|ZP_08238415.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces cf. griseus XylebKG-1]
 gi|178467020|dbj|BAG21540.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326659483|gb|EGE44329.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces cf. griseus XylebKG-1]
 gi|327187182|dbj|BAK08924.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus]
          Length = 213

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 22/207 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + + VLG+V+++     S      T   +P+  ++ F +   P LV +     L  
Sbjct: 28  VLGTLVAAVLGLVVAMAGRAPS------TFVTVPVRLVTEF-VRSTPLLVQLVGAAALF- 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                        +TV P ++ + + L  + AA+ +E+ R+G+  VP+GQ EA  AL L+
Sbjct: 80  -------------TTVEPLYIGITV-LGVHYAAYTSEVYRAGIDGVPKGQWEACRALSLS 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  + V+LPQA+R+++P L +  +++ K +     +   ++V        +     E+
Sbjct: 126 PRRTWQAVILPQAVRNVLPALGNYAISMFKETPFLAVITVQEMVFEARKYGAEQFAYTEV 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   I+L  S   +L M +L  ++ 
Sbjct: 186 FTLAGLIFLVASYPTSLLMRKLEKRLG 212



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T      G + A ++G +V     + +  V    R+  E  R+ P LV +   
Sbjct: 16  LLEGFKVTLLATVLGTLVAAVLGLVVAMAGRAPSTFVTVPVRLVTEFVRSTPLLVQLVGA 75

Query: 149 YKSVLSVLPIPDHSIVL 165
                +V P+     VL
Sbjct: 76  AALFTTVEPLYIGITVL 92


>gi|332162410|ref|YP_004298987.1| histidine transport system permease protein HisQ [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606495|emb|CBY27993.1| histidine ABC transporter, permease protein HisQ [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666640|gb|ADZ43284.1| histidine transport system permease protein HisQ [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330863722|emb|CBX73823.1| histidine transport system permease protein hisQ [Yersinia
           enterocolitica W22703]
          Length = 228

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S ++G++ +      +R           L    T LI G+P LVL+ L +  
Sbjct: 19  LALCSVLLSVIIGLIGAGGKLSSNRLLSG-------LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AVP GQ+EAA A G
Sbjct: 72  LQIVLNSITESLGFAQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPTGQIEAARAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FSSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGVVYLIFTTLSNGILLWLERRYSHGVKR 225


>gi|311107287|ref|YP_003980140.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Achromobacter
           xylosoxidans A8]
 gi|310761976|gb|ADP17425.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Achromobacter xylosoxidans A8]
          Length = 223

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             I + + VLG+++++                 +LP  ++  F +   P LV +   Y L
Sbjct: 21  LLITIQATVLGMLVAVTLGLALALLRRSRLRIVSLPTAFVIEF-VRSTPLLVQM---YFL 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P+                 +   AL  + A + AE+ R+G+ AVPRGQ EAA AL 
Sbjct: 77  FYVLPLT--------GVRLSPLATGIAALGLHYATYCAEVYRAGIEAVPRGQWEAATALN 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    V+LPQA+  ++P L +  + + K++ L  A+   +L+     I + T +  
Sbjct: 129 MSRWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKMIGSATFRYT 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E + +   ++L+LS++ A  +  L A++   
Sbjct: 189 EPLTLVGLLFLALSLVAAWGVRGLEARLQRY 219


>gi|307945342|ref|ZP_07660678.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Roseibium sp. TrichSKD4]
 gi|307771215|gb|EFO30440.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Roseibium sp. TrichSKD4]
          Length = 303

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 105/276 (38%), Gaps = 6/276 (2%)

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
             +A +  VY  +  N+   ++ F L    +      +  + L        R        
Sbjct: 34  WAIAGLYLVYY-LIGNLEKPILEFLLPYLPIDWQEYANERLALQTFDSYLERYGQKYIDG 92

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +    +I   S + G  LS+     +R    K        ++  F   G P +    L Y
Sbjct: 93  LIVTLQIVGLSLLFGAALSIPIAA-ARSSKWKIFSWPAYGFVYFF--RGTPLIAQTFLIY 149

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F        +          F  +  A +  TAA+ AEI+R  +  V RGQ E A A
Sbjct: 150 Y-GFGSFRPELQSIGLWWFFRDAFYCVVFAFTLNTAAYQAEILRGAVQNVARGQWEGAAA 208

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+       ++LPQA+   + P  ++ + ++K S++A  V   D+ +      ++T  
Sbjct: 209 LGLSKPVTFFKIILPQALIVALRPYGNEIILMIKGSAIAAIVTVFDMFAETKRAYSRTYD 268

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  +    +YL +   +    ++L A++    K+
Sbjct: 269 -FQAYIWAAVLYLMIVETLRRIWDKLEARLTRHLKR 303



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 3/151 (1%)

Query: 19  LYDMRVHNISVQIILALLLTVIFLWCVNNVYNN-MEKSNLSLGIGFLSERAGFEIDQGIV 77
             + R+    +  + A+    +  + + N+    +E     L I +          Q   
Sbjct: 20  WTNARIAGHVLMALWAIAGLYLVYYLIGNLEKPILEFLLPYLPIDWQEYANERLALQTFD 79

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y     Y    + G + T  +    ++    +   + A R S  K+ +W    +V  FR
Sbjct: 80  SYLER--YGQKYIDGLIVTLQIVGLSLLFGAALSIPIAAARSSKWKIFSWPAYGFVYFFR 137

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
             P +   F +Y    S  P      +  F 
Sbjct: 138 GTPLIAQTFLIYYGFGSFRPELQSIGLWWFF 168


>gi|229514203|ref|ZP_04403664.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TMA
           21]
 gi|229348183|gb|EEO13141.1| arginine ABC transporter permease protein ArtM [Vibrio cholerae TMA
           21]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLSMT-VSLVMRTPVVHWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGIAGAFYLTVNGILTLIFRQIEKK 215


>gi|319782447|ref|YP_004141923.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168335|gb|ADV11873.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 224

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 18/222 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L    +T+  +    V   +LG  L +  T  +R      G  + L       I G
Sbjct: 13  YPLALRGLGMTVLLSLISLVLGTLLGFALGILRTGGNRLISGLIGAWVDL-------IRG 65

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L +           F           F +  IAL+   A FI EIV +G+ +
Sbjct: 66  TPFLVQIFLIF-----------FILPEFGIELDAFTAGIIALTNLAACFICEIVVAGIRS 114

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ+EAA+A GL+  +  R V+LPQAMR ++PPL  QY+ L+K+SS+  A+G  DL  
Sbjct: 115 VPTGQVEAALASGLSRWQRMRQVVLPQAMRIVLPPLVGQYVLLIKDSSVVSAIGLTDLTR 174

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           VG  ++ +    + +  +    Y  +   + +   RL  ++ 
Sbjct: 175 VGWLVVQRVPNGLLVFFLVGAGYFIVCYPLIMLARRLEQRMG 216



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 33/69 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L+   ++  T++G  +G  R   N+L++ +   +V++ R  P LV IF ++
Sbjct: 17  LRGLGMTVLLSLISLVLGTLLGFALGILRTGGNRLISGLIGAWVDLIRGTPFLVQIFLIF 76

Query: 150 KSVLSVLPI 158
             +      
Sbjct: 77  FILPEFGIE 85


>gi|307133279|ref|YP_003885295.1| putative ABC transporter membrane protein [Dickeya dadantii 3937]
 gi|306530808|gb|ADN00739.1| putative ABC transporter membrane protein [Dickeya dadantii 3937]
          Length = 250

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 96/190 (50%), Gaps = 4/190 (2%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R     +    +  PLL    F  FG   L+   L   L+           +G +  S E
Sbjct: 63  RWLAIAYCSLFRNTPLLVQLFFWYFGAAQLLPAGLMQWLN----SPHVIPLLGLNGPSFE 118

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++    L+ Y+AAFIAE +R+G+  V  GQ  AA ALGLT  +A R V+LPQA+R  +P
Sbjct: 119 FLAGLFGLTLYSAAFIAEEIRAGIAGVAHGQKYAACALGLTDWQAMRYVVLPQALRIALP 178

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  QY+N++KNSSLA+A+G A+L      +  +T +  +   +    Y++   ++  + 
Sbjct: 179 PLLGQYMNVIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATVFYIAAIALLEGWG 238

Query: 386 NRLNAKIALK 395
                +  LK
Sbjct: 239 QWRQHRQPLK 248



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 43/93 (46%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I Q +  +     Y   +  GF  T  +A + ++ AT +G ++ AGR S   L+ W+  
Sbjct: 8   SIRQWLTDWLLAPQYLQWLWQGFQVTLGIAAATVVLATALGLVLAAGRDSRTPLLRWLAI 67

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            Y  +FRN P LV +FF Y     +LP      
Sbjct: 68  AYCSLFRNTPLLVQLFFWYFGAAQLLPAGLMQW 100


>gi|238765551|ref|ZP_04626464.1| ABC-type amino acid transport system permease component [Yersinia
           kristensenii ATCC 33638]
 gi|238696229|gb|EEP89033.1| ABC-type amino acid transport system permease component [Yersinia
           kristensenii ATCC 33638]
          Length = 251

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 107/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   + S + G+  ++  T L       +G    +L       
Sbjct: 10  WTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTVLGVVLAMSSGVWAGILAAFLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 MAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 224


>gi|91782439|ref|YP_557645.1| ABC basic amino acid transporter, inner membrane subunit
           [Burkholderia xenovorans LB400]
 gi|296159043|ref|ZP_06841870.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|91686393|gb|ABE29593.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295890604|gb|EFG70395.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 237

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R   +K    L  LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSIPL-AVARVSKKKWLAGLVWLY--TYIFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++     +  +          +A +  T A+  EI    + A P G++EAA A G++
Sbjct: 84  SLEIIRNHE-LTNAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIRATPYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T Q+   
Sbjct: 143 SFTLYRRVILPSALRRALPYYSNEVILMLHATTVAFTATVPDILKIARDVNSATYQSFNA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +         +
Sbjct: 203 FGIAAVLYLCISFALVWLFRCAERR 227



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A +  +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGLAITLWLLVVSIGLGFCLSIPLAVARVSKKKWLAGLVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR  P  V +   Y  + S+  I +H +   F     +  L   TL          
Sbjct: 62  YTYIFRGTPLYVQLLLCYTGLYSLEIIRNHELTNAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|56414022|ref|YP_151097.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362945|ref|YP_002142582.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|56128279|gb|AAV77785.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197094422|emb|CAR59938.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S  + +VL+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKELHTSLTLTVASIAVALVLALVFTII---LTLKTPFVVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPLLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVV-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 37/114 (32%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L     +  L  + +  A ++  +           V W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKELHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|121604397|ref|YP_981726.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593366|gb|ABM36805.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 217

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 18/227 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG+      L     T+  +   F+   + G++++L  T  +R     +G  +       
Sbjct: 4   FGLPEFLFILEAAKWTVALSLIAFIGGAIGGLLVALGRTSENRLAQLLSGGFI------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                      I     L     ++     + G  ++P +++  +AL   ++AF+ EI R
Sbjct: 57  ----------QIFQGTPLLLQLFLVFFGAPVLGFDINP-WIAAGVALILNSSAFLGEIWR 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + A+P GQ+EAA AL L++    R V+LPQA +  + P     + ++K +SLA  +GF
Sbjct: 106 GCIQAIPAGQVEAAHALSLSYFSRMRFVILPQAFKIALAPTVGYLVQIIKGTSLAAIIGF 165

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++   G  I N T Q + +  +   IY +L   ++L  +R+  + A
Sbjct: 166 TEITRAGQIINNATFQPLIVFSVVAAIYFALCWPLSLMASRMERRQA 212


>gi|222086405|ref|YP_002544939.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723853|gb|ACM27009.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 219

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 14/228 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    L       + + SF+ G  +      L R    K  +     ++  F  
Sbjct: 4   FTTWDILRGLLLATRWTILLSLVSFIGGGTVGAILLFL-RIGKNKVARIAVKYFVELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F         P +++  +AL  +++AF+ EI R  +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLGLFGIDVPAWLAAAVALILWSSAFLIEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV +GQ EA+ +L + + +  R V+LPQA+R  +PP     + ++K ++L   +GF +L
Sbjct: 110 EAVAKGQWEASASLAMGYMQQMRYVILPQALRIAVPPTVGFSVQVVKGTALTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G  I N T Q   +      IY +L   ++     L  K+ +  +
Sbjct: 170 SKAGTIITNATFQPFTVYGFVALIYFALCWPLSKSSQILERKLNVAHR 217



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 35/108 (32%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L+    T  L+    I    +G ++   R+  NK+     + +VE+F+  P 
Sbjct: 6   TWDILRGLLLATRWTILLSLVSFIGGGTVGAILLFLRIGKNKVARIAVKYFVELFQGTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           L+ +F  +  +          +     + L +             A  
Sbjct: 66  LMQLFLAFFGLGLFGIDVPAWLAAAVALILWSSAFLIEIWRGCVEAVA 113


>gi|206577118|ref|YP_002239698.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Klebsiella pneumoniae 342]
 gi|288936540|ref|YP_003440599.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|206566176|gb|ACI07952.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Klebsiella pneumoniae 342]
 gi|288891249|gb|ADC59567.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 224

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + V+GIV       +      +    LPL +
Sbjct: 1   MYDFDWSSIVPSMPYLLAGLVITLKITVIAIVVGIVWGTLLAVM------RLSSFLPLAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKTYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSGAALALGMTHWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLLVSWLKKR 222



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +    ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKTYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|28868348|ref|NP_790967.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28851585|gb|AAO54662.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 243

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 35  GFLQGAALTLFVSVCSIVVSVLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 94

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 95  IYLGLPQLGIVPGAIAAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPTQIF 154

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 155 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 214

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 215 VLYWIMSIGLELLQSRLEKHYG 236


>gi|15601513|ref|NP_233144.1| arginine transporter permease subunit ArtQ [Vibrio cholerae O1
           biovar eltor str. N16961]
 gi|147672019|ref|YP_001215536.1| arginine transporter permease subunit ArtQ [Vibrio cholerae O395]
 gi|153818658|ref|ZP_01971325.1| membrane protein [Vibrio cholerae NCTC 8457]
 gi|229506085|ref|ZP_04395594.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae BX
           330286]
 gi|229510058|ref|ZP_04399538.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           B33]
 gi|229516381|ref|ZP_04405828.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           RC9]
 gi|229605616|ref|YP_002876320.1| arginine transporter permease subunit ArtQ [Vibrio cholerae
           MJ-1236]
 gi|254849919|ref|ZP_05239269.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255746481|ref|ZP_05420428.1| arginine ABC transporter permease protein ArtQ [Vibrio cholera CIRS
           101]
 gi|262152376|ref|ZP_06028509.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           INDRE 91/1]
 gi|262168600|ref|ZP_06036296.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           RC27]
 gi|9658180|gb|AAF96656.1| arginine ABC transporter, permease protein [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|126510811|gb|EAZ73405.1| membrane protein [Vibrio cholerae NCTC 8457]
 gi|146314402|gb|ABQ18942.1| arginine ABC transporter, permease protein [Vibrio cholerae O395]
 gi|227015181|gb|ACP11390.1| arginine ABC transporter, permease protein [Vibrio cholerae O395]
 gi|229346262|gb|EEO11233.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           RC9]
 gi|229352503|gb|EEO17443.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           B33]
 gi|229356436|gb|EEO21354.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae BX
           330286]
 gi|229372102|gb|ACQ62524.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           MJ-1236]
 gi|254845624|gb|EET24038.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255736235|gb|EET91633.1| arginine ABC transporter permease protein ArtQ [Vibrio cholera CIRS
           101]
 gi|262023129|gb|EEY41834.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           RC27]
 gi|262030827|gb|EEY49458.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           INDRE 91/1]
          Length = 229

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F   G       F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFFITGEFIEISPFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAVVYLVITLITQRVVKVIDNKFSIQ 219


>gi|332163538|ref|YP_004300115.1| putative amino acid transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318608044|emb|CBY29542.1| glutamate transport membrane-spanning protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325667768|gb|ADZ44412.1| putative amino acid transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 251

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   + S + G+  ++  T L        G    +L       
Sbjct: 10  WTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTALGVALAMSRGVWAAVLAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLDLLANGLNRRFS 224


>gi|306825525|ref|ZP_07458864.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431886|gb|EFM34863.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 266

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           PL       + G P LV + L Y       K +  Q+         P  +   +A +   
Sbjct: 75  PLQAFFVSFLKGTPILVQLMLTYYGIPLALKAINQQWGTGFNINAIPAALFAIVAFAFNE 134

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SLA + G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 195 TSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|153011069|ref|YP_001372283.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562957|gb|ABS16454.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 14/207 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   + VLG+++S+    L +    K  + +   YI   +I   P LV I   + 
Sbjct: 21  WQTIELSCAAMVLGLIVSIV-CALGKTSGPKPVRLIIDAYIE--IIRNTPFLVQIFFIF- 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F             +  +AL     A+  EI+R+G+ ++ +GQ+EA  AL
Sbjct: 77  ----------FGLPSAGLRLSPNSAALLALVVNFGAYGTEIIRAGIESIHKGQVEAGTAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V++  A+R++ P LTSQ++ L+  SS+   +   +L + G  + + T  +
Sbjct: 127 GLSKLQVFRYVIMKPALRTVYPSLTSQFIYLMLTSSVVSVISANELAAAGNDLQSATFAS 186

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
            E+ ++   +YL +SI  +   + +  
Sbjct: 187 FEVYIVITLMYLVMSIGFSAIFSVIEK 213



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  L+ + M+   I+  +   G+ S  K V  I   Y+E+ RN P LV IFF+
Sbjct: 16  LLVGAWQTIELSCAAMVLGLIVSIVCALGKTSGPKPVRLIIDAYIEIIRNTPFLVQIFFI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + S       +      + +N 
Sbjct: 76  FFGLPSAGLRLSPNSAALLALVVNF 100


>gi|313896660|ref|ZP_07830208.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312974577|gb|EFR40044.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 253

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 8/228 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F   +    L      +D    +   S   G +L       +     +  +AL  +Y+  
Sbjct: 6   FDAGMILEVLPDLLAYLDVTLLVAGISIAAGSLLGGLL-AWANLDGGRPLRALAAVYVYV 64

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                      I L + + +  P L Q  F          +   I  +    A+I+E+ R
Sbjct: 65  MRCTPS-----IVLLFIVFYGLPKLLQGAFGIDMNGMNRAVFAVITFTLLFGAYISEVFR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +   AVPRGQ EAA+  GL+  +A   V+LPQA    +P   +  +NLLK  SLA  +G 
Sbjct: 120 AAYKAVPRGQYEAAVCAGLSPVQAFAHVMLPQAAIVALPNFGNASINLLKEGSLAYTIGL 179

Query: 347 ADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            DL+  G  II Q      IEI L  M +Y ++ +++     ++  ++
Sbjct: 180 IDLIGKGNLIIAQNFGAYGIEIYLACMLVYWAVVLLLEQVFTQVERRL 227


>gi|301385505|ref|ZP_07233923.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
          Length = 232

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +PP +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPPYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|209519717|ref|ZP_03268505.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209499861|gb|EDZ99928.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 218

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    L            I +     G+ +  F   L R +     + +   Y+
Sbjct: 1   MQFDLSVVVDALPALLQGAKLTVLITIAGLAGGLAVG-FLFGLMRAYGNAFLQKIAFAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P +V +   Y   F  PVL        +       +  +++   + A+IAEI
Sbjct: 60  EF--VRGTPIVVQVMFIY---FALPVL-------LNVRVDALTAAIVSIIVNSGAYIAEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR   ++VPRG  EA +ALG+   +    V+ P A+R + P L +Q++  LK++SL + +
Sbjct: 108 VRGSFLSVPRGLKEAGLALGMPMWRVLGFVVGPVAIRRMTPALGNQFIVSLKDTSLFIVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L   G  I+    +A+EI      IYL +  ++   +  +  ++ +
Sbjct: 168 GVGELTRQGQEIMAANFRAVEIWTAVAAIYLCMIGVLTFGLRTMEKRMRI 217



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +  +G+     +G L G  R   N  +  I   YVE  R  P +V + F
Sbjct: 14  ALLQGAKLTVLITIAGLAGGLAVGFLFGLMRAYGNAFLQKIAFAYVEFVRGTPIVVQVMF 73

Query: 148 LYKSVL 153
           +Y ++ 
Sbjct: 74  IYFALP 79


>gi|163792347|ref|ZP_02186324.1| ABC polar amino acid transporter, inner membrane subunit [alpha
           proteobacterium BAL199]
 gi|159182052|gb|EDP66561.1| ABC polar amino acid transporter, inner membrane subunit [alpha
           proteobacterium BAL199]
          Length = 221

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T      +     + G++++L    LS+H   +     P   +  F     P +
Sbjct: 22  LRGLGVTAQLCLAVVPLGLIGGLLIALVC--LSKHRAIRW----PAFVLVDFFRAVPPLV 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI +   L F                   FM++ IA    T ++  EI R+G+ ++ +G
Sbjct: 76  LLIFIYAGLPFI------------GIRPSPFMAVCIAFLLNTGSYYGEIYRAGIDSIGKG 123

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA + GLT  +    V++PQA+R+++P L S  + ++K +S+A  V   +L+     
Sbjct: 124 QWEAARSTGLTTTQTLVYVVIPQAVRNVLPDLVSNTVEVVKLTSIASVVALPELLYSADM 183

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             + T     I +    IYL L       ++RL  ++A 
Sbjct: 184 ARSLTYNPSPI-VAAAVIYLILLWPCVRLLSRLEHRVAR 221



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 39/94 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L  + +    I G L+    LS ++ + W   V V+ FR +PPLV++ F+
Sbjct: 21  LLRGLGVTAQLCLAVVPLGLIGGLLIALVCLSKHRAIRWPAFVLVDFFRAVPPLVLLIFI 80

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           Y  +  +   P   + +     LN          
Sbjct: 81  YAGLPFIGIRPSPFMAVCIAFLLNTGSYYGEIYR 114


>gi|123441811|ref|YP_001005795.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|332162246|ref|YP_004298823.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|122088772|emb|CAL11578.1| arginine transport system permease protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|318606309|emb|CBY27807.1| arginine ABC transporter, permease protein ArtM [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666476|gb|ADZ43120.1| arginine transporter permease subunit ArtM [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330860381|emb|CBX70691.1| arginine transport system permease protein artM [Yersinia
           enterocolitica W22703]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 91/185 (49%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT  A PL+ I   L  G P LV I L Y      P + ++ ++      P ++   IAL
Sbjct: 40  KTPIATPLVKIYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLWNLLSQP-WLCAMIAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++  ++   +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPAGQWQSCEALGMSKAQSL-RILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K++SLA  +   +++     +  +T   + +      +YL ++ ++ LFM  +  +  
Sbjct: 158 VFKSTSLAYTITLMEVMGYSQLMYGRTYDVM-VFGAAGLVYLVVNGLLTLFMRVVERRAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 AFERR 221


>gi|50120251|ref|YP_049418.1| glutamate/aspartate transport system permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610777|emb|CAG74222.1| glutamate/aspartate transport system permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 224

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 10/220 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +    +T+       VF  + G +L++      R    K       LY++ F    
Sbjct: 13  MPYLIQGMVVTLKITLTAVVFGIIWGTILAVM-----RLSPIKAISWFAKLYVNLFRSVP 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV++ L + L    P L Q             +S  +A S + AA+ +EI+R+G+I+
Sbjct: 68  ---LVMVLLWFYL--VVPSLLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGIIS 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   +  AD   
Sbjct: 123 VSRGQSSAALALGMTHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFR 182

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              TI  + G  +E+IL   FIY   SI  ++ ++ L  +
Sbjct: 183 TASTIGERDGTQVEMILFAGFIYFLFSITASMLVSYLKKR 222



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 43/78 (55%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       ++ G V T  +  + ++   I GT++   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIGPSMPYLIQGMVVTLKITLTAVVFGIIWGTILAVMRLSPIKAISWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLVVPSL 82


>gi|325686599|gb|EGD28625.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 228

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +L    L + +  +  +   ++Y++         L+L      
Sbjct: 18  PVTLIIMVVAILLSFIPALLL-ALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +                   +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQIFKSLGSKVDVFKFNPLYYAFIIYSLMTTGSLSEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     + + Q 
Sbjct: 137 GLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKDITALAKIEASHSYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   IYL +  +I      L  + AL
Sbjct: 197 SESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + I   L+  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGIPVTLIIMVVAILLSFIPALLLALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
               S+L     S+     +F  N       + 
Sbjct: 74  SLFPSLLNQIFKSLGSKVDVFKFNPLYYAFIIY 106


>gi|311894709|dbj|BAJ27117.1| putative amino acid ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 293

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 11/186 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R++        +A   LY+  F          + L + + F  P +     + G+  SP 
Sbjct: 108 RVTTAPWLLPLRATAALYVDVFRGVPT-----MLLIFLIGFGVPAMQ----LQGTPKSPV 158

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   IAL     A++AE+ R+GL +V   Q  AA ALGL+ ++  R V+LPQA+R+++P
Sbjct: 159 VLGA-IALVVSYTAYVAEVFRAGLTSVHPAQHNAARALGLSRQQTMRSVVLPQAVRNVLP 217

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L + ++ L K+++L   +G  + + V     +         L    ++++++I +  + 
Sbjct: 218 ALLNDFIALQKDTALVAVLGPLEALRVAQIAADSEFNYTP-YLCAAVMFIAVTIPMTRYA 276

Query: 386 NRLNAK 391
           + L  +
Sbjct: 277 DWLERR 282


>gi|323494403|ref|ZP_08099512.1| ABC-type transport system permease protein [Vibrio brasiliensis LMG
           20546]
 gi|323311333|gb|EGA64488.1| ABC-type transport system permease protein [Vibrio brasiliensis LMG
           20546]
          Length = 241

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 92/242 (38%), Gaps = 3/242 (1%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
           +        L            +    +  + +I    ++ G+ +       ++    K 
Sbjct: 1   MANYRDMSALELLSLSPPGWGGYLLDGLMVSLQIAGLGYLCGLAIGFVG---AKAKRGKN 57

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
              + +  I T +I  +P LVLI L Y    +    G   F         F +  + ++ 
Sbjct: 58  LFWIDIAKIYTTVIRSVPELVLILLVYFALPELINQGLQLFGFEPFEMSGFWAGVLVIAI 117

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              A+  E++R  L +VP G +EAA + G+        + +P+ + + IP L++ +L   
Sbjct: 118 VQGAYATEVIRGALNSVPPGHIEAAHSFGMHPWVVFYRITIPEMLPNAIPGLSNLWLIAT 177

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K+++L   VGF +L          T      +     +YL +S++       L  +++  
Sbjct: 178 KDTALLAVVGFTELTLAAKQAAGATKDYFLFLAAAGVLYLLVSLVSNRLFKYLEQRVSKG 237

Query: 396 EK 397
            K
Sbjct: 238 VK 239


>gi|262041260|ref|ZP_06014471.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330005985|ref|ZP_08305451.1| glutamate/aspartate transport system permease protein GltK
           [Klebsiella sp. MS 92-3]
 gi|259041376|gb|EEW42436.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328536022|gb|EGF62430.1| glutamate/aspartate transport system permease protein GltK
           [Klebsiella sp. MS 92-3]
          Length = 224

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + V+GIV       +      +    LPL +
Sbjct: 1   MYDFDWSSIVPSMPYLLAGLVITLKITVIAIVVGIVWGTLLAVM------RLSSFLPLAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKSYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLLVSWLKKR 222



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +    ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFLPLAWFAKSYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|317047527|ref|YP_004115175.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949144|gb|ADU68619.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 99/225 (44%), Gaps = 6/225 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+  + V S +  +VLSL  T +      K      ++     +  G P
Sbjct: 3   QYLPELLKGLHTSLTLTVASLIAALVLSLLFTVV---LALKVPVVNAIVKGYITVFTGTP 59

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y      P +    ++      P ++   +ALS  +AA+  ++    + A+P
Sbjct: 60  LLVQIFLIYYGPGQFPSIQNLPWLWHLLSQP-WLCALLALSLNSAAYTTQLFYGAVRAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ ++  ALG+  +     +LLP A +  +   +++ + + K++SLA  +   +++  G
Sbjct: 119 SGQWQSCAALGMNRKDTL-RILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHG 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  +T   + +      +YL ++ ++ L M  +  +    E++
Sbjct: 178 QLLYGRTYD-VTVFAAAGLVYLCVNGLLTLMMRLIERRALAFERR 221



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 37/115 (32%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G   +  L  + +I A ++  L          +V  I + Y+ VF   P LV
Sbjct: 3   QYLPELLKGLHTSLTLTVASLIAALVLSLLFTVVLALKVPVVNAIVKGYITVFTGTPLLV 62

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            IF +Y        I +   +           L   +L          +  V  I
Sbjct: 63  QIFLIYYGPGQFPSIQNLPWLWHLLSQPWLCALLALSLNSAAYTTQLFYGAVRAI 117


>gi|254430534|ref|ZP_05044237.1| ABC-type permease for basic amino acids and glutamine [Cyanobium
           sp. PCC 7001]
 gi|197624987|gb|EDY37546.1| ABC-type permease for basic amino acids and glutamine [Cyanobium
           sp. PCC 7001]
          Length = 331

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 82/281 (29%), Positives = 137/281 (48%), Gaps = 26/281 (9%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++ + +    +   I + +I     +      L+    T+       + + +LG +  +
Sbjct: 51  LLLTWRWLGQPAGFNIGESTIPFDAALPYWRALLAGLANTLRAVVCGLIGATLLGTMAGM 110

Query: 203 FAT------RLSRHFHEKTGKALPLLYISTFLIFGLPT--------------------LV 236
                    R     + +  + +PLL    F  F +                      L 
Sbjct: 111 ANFSSNGLLRGLVRGYVEVVRNIPLLLQLVFWYFVVFLALPNGAAALQLPGLTLAKSGLY 170

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L        +  P L    +     +S EF +L   L  Y+ A+IAE+VR+G+ AVP GQ
Sbjct: 171 LAGFGPGWEWAGPTLVNGVWQAPLRLSVEFGALLCGLVVYSGAYIAEVVRAGIAAVPEGQ 230

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA +LGL    + R V+LPQA+R I+P L +QY++L KNSSLAVAVG+ DL +V  T 
Sbjct: 231 WEAASSLGLGWLASVRHVVLPQALRVIVPGLNTQYISLAKNSSLAVAVGYPDLYAVAETT 290

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +NQTG+A+E++++ +  YL L ++I+  MN LN  + ++E+
Sbjct: 291 LNQTGRAVEMVILLLAAYLVLDLLISAVMNGLNRLVQIRER 331



 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 87/187 (46%)

Query: 10  TRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
            +  + + +  + R+    +Q  +AL++ ++  + + N+  N+  + L L   +L + AG
Sbjct: 4   PQTPAVIPWWRNRRLLPWLLQAAVALVVLLVVAFLLGNLIRNLTAAGLLLTWRWLGQPAG 63

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F I +  +P+ +   Y  A+L G  NT      G+I AT++GT+ G    S+N L+  + 
Sbjct: 64  FNIGESTIPFDAALPYWRALLAGLANTLRAVVCGLIGATLLGTMAGMANFSSNGLLRGLV 123

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           R YVEV RNIP L+ + F Y  V   LP    ++ LP      +             A  
Sbjct: 124 RGYVEVVRNIPLLLQLVFWYFVVFLALPNGAAALQLPGLTLAKSGLYLAGFGPGWEWAGP 183

Query: 190 FVFSFVL 196
            + + V 
Sbjct: 184 TLVNGVW 190


>gi|187919547|ref|YP_001888578.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717985|gb|ACD19208.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 216

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 96/227 (42%), Gaps = 14/227 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +  +GL            I +   ++G  +++     +R    +  +     Y+ 
Sbjct: 1   MFSTTVFLQGLPLLLHAALATIGISLAGLLIGFFVAIGVCA-ARLSPNRAARMFGGAYVF 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F                +     ++       G  VSP  ++   A+S  +A++IAEI+
Sbjct: 60  FFR------------GVPMLVQLLLVYYLLPFAGINVSP-IVAALSAVSLCSASYIAEIL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G ++VP G +EAA  LGL+     R +L+PQA R  +P L ++ + L+K SSL   VG
Sbjct: 107 RGGFLSVPPGHLEAARMLGLSPFDMLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            A+L      I   T + +E  +    IY  +   +AL  +    ++
Sbjct: 167 VAELTRTAQNIAASTYRPLEAYVAAGLIYFVICGALALVAHAAEYRL 213


>gi|22125569|ref|NP_668992.1| glutamine ABC transporter permease [Yersinia pestis KIM 10]
 gi|45442118|ref|NP_993657.1| glutamine ABC transporter permease [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51596868|ref|YP_071059.1| glutamine ABC transporter permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808000|ref|YP_651916.1| glutamine ABC transporter permease [Yersinia pestis Antiqua]
 gi|108812270|ref|YP_648037.1| glutamine ABC transporter permease protein [Yersinia pestis
           Nepal516]
 gi|145599205|ref|YP_001163281.1| glutamine ABC transporter permease protein [Yersinia pestis
           Pestoides F]
 gi|149365578|ref|ZP_01887613.1| putative glutamine transport system permease [Yersinia pestis
           CA88-4125]
 gi|153949155|ref|YP_001400472.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162420264|ref|YP_001606263.1| glutamine ABC transporter permease [Yersinia pestis Angola]
 gi|165925600|ref|ZP_02221432.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937741|ref|ZP_02226303.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008576|ref|ZP_02229474.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167399647|ref|ZP_02305171.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167422284|ref|ZP_02314037.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426964|ref|ZP_02318717.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170023840|ref|YP_001720345.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis
           YPIII]
 gi|218929602|ref|YP_002347477.1| glutamine ABC transporter permease [Yersinia pestis CO92]
 gi|229838047|ref|ZP_04458206.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895246|ref|ZP_04510420.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|229898607|ref|ZP_04513752.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229902606|ref|ZP_04517723.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|270490213|ref|ZP_06207287.1| glutamine ABC transporter permease protein [Yersinia pestis KIM
           D27]
 gi|294504265|ref|YP_003568327.1| glutamine ABC transporter permease component [Yersinia pestis
           Z176003]
 gi|21958472|gb|AAM85243.1|AE013770_9 inner membrane permease [Yersinia pestis KIM 10]
 gi|45436981|gb|AAS62534.1| putative glutamine transport system permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590150|emb|CAH21787.1| ABC glutamine transporter, permease subunit glnP [Yersinia
           pseudotuberculosis IP 32953]
 gi|108775918|gb|ABG18437.1| glutamine transport system permease [Yersinia pestis Nepal516]
 gi|108779913|gb|ABG13971.1| putative glutamine transport system permease [Yersinia pestis
           Antiqua]
 gi|115348213|emb|CAL21141.1| putative glutamine transport system permease [Yersinia pestis CO92]
 gi|145210901|gb|ABP40308.1| glutamine transport system permease [Yersinia pestis Pestoides F]
 gi|149291991|gb|EDM42065.1| putative glutamine transport system permease [Yersinia pestis
           CA88-4125]
 gi|152960650|gb|ABS48111.1| glutamine ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162353079|gb|ABX87027.1| glutamine ABC transporter, permease protein [Yersinia pestis
           Angola]
 gi|165914491|gb|EDR33106.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922709|gb|EDR39860.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992958|gb|EDR45259.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166958790|gb|EDR55811.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167052151|gb|EDR63559.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167054066|gb|EDR63894.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750374|gb|ACA67892.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|229680053|gb|EEO76152.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Nepal516]
 gi|229688155|gb|EEO80226.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694413|gb|EEO84460.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701732|gb|EEO89757.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis Pestoides A]
 gi|262362384|gb|ACY59105.1| glutamine ABC transporter permease component [Yersinia pestis
           D106004]
 gi|262366308|gb|ACY62865.1| glutamine ABC transporter permease component [Yersinia pestis
           D182038]
 gi|270338717|gb|EFA49494.1| glutamine ABC transporter permease protein [Yersinia pestis KIM
           D27]
 gi|294354724|gb|ADE65065.1| glutamine ABC transporter permease component [Yersinia pestis
           Z176003]
 gi|320014657|gb|ADV98228.1| glutamine transporter subunit; membrane component of ABC
           superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 218

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+R +       + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  LARAYGGWLSSHIALVFIE--LIRGTPIVVQVMFIY---FALPMMIPLRI-------DPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R     V+ P A+R ++PP
Sbjct: 90  SAAVVTIIINSGAYIAEITRGAVLSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217


>gi|330830033|ref|YP_004392985.1| amino acid ABC transporter permease [Aeromonas veronii B565]
 gi|328805169|gb|AEB50368.1| ABC-type amino acid transporter, permease protein [Aeromonas
           veronii B565]
          Length = 301

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 1/250 (0%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           + +     +L  P     LP+        L    L M     +     V       +   
Sbjct: 50  WRWHEAFDLLFTPGPHGELPYFFSGLLTTLRIALLGMVLALLLGTALGVAAFSRRPWLVM 109

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            +  F +      PL++I  F  F    L+    L   L        Q    G       
Sbjct: 110 PATLFIQLIRNLPPLVFIFIFYFFIANQLLPASGLSRWLGTVSLSPWQEALFGPPARWEN 169

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +S  + +   +AAF+AEIVR+GL A+PRGQ EAA +LGL+     R V+LPQAM  ++P
Sbjct: 170 LISGTLCVGMISAAFVAEIVRAGLAAIPRGQWEAAQSLGLSPWVRLRHVILPQAMLLMLP 229

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLT Q + L+K++++   +   +L  VG  + N +G   EI L+    YL + + + + +
Sbjct: 230 PLTGQLIALVKDTAIVSLISVQELTFVGTEMANSSGLVYEIWLLVAAAYLFICLSLFVLL 289

Query: 386 NRLNAKIALK 395
           +RL A+   +
Sbjct: 290 SRLEARQGAR 299



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 6/202 (2%)

Query: 53  EKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112
            + ++ +   +    A F++     P+            G + T  +A  GM+ A ++GT
Sbjct: 40  SRLHIGVAYQWRWHEA-FDLLFTPGPHGE----LPYFFSGLLTTLRIALLGMVLALLLGT 94

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +G    S    +     +++++ RN+PPLV I F++   ++   +P   +    G    
Sbjct: 95  ALGVAAFSRRPWLVMPATLFIQLIRNLPPLVFI-FIFYFFIANQLLPASGLSRWLGTVSL 153

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +               +   +  +G++ + F   + R       +       S  L   +
Sbjct: 154 SPWQEALFGPPARWENLISGTLCVGMISAAFVAEIVRAGLAAIPRGQWEAAQSLGLSPWV 213

Query: 233 PTLVLIALKYQLHFDKPVLGQF 254
               +I  +  L    P+ GQ 
Sbjct: 214 RLRHVILPQAMLLMLPPLTGQL 235


>gi|153215601|ref|ZP_01950046.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124114689|gb|EAY33509.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587]
          Length = 222

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLLMT-VSLVMRTHVVHWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGIAGAFYLAVNGILTLIFRQIEKK 215


>gi|319947566|ref|ZP_08021796.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319746254|gb|EFV98517.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 268

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 2/181 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           P+  +    + G P LV + L Y       K +  Q+         P  + + +A +   
Sbjct: 75  PIQALFVSFLRGTPILVQLMLTYYGIPLLLKAINQQYGTAFNINDVPAHLFVIVAFAFNE 134

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T+ +  R +++P A     P L +  + L K 
Sbjct: 135 AAYASETIRAAILSVDAGEIEAAKSLGMTNAQVYRRIIIPNAAVVATPTLINSLIGLTKG 194

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SLA   G  ++ +    +     +  E  +    IY +++I+I      +   +++K+ 
Sbjct: 195 TSLAFYAGVLEIFAQAKIMSGNDSRYFERFISVSLIYWAINILIEQLGRWIEQVLSIKDP 254

Query: 398 K 398
           K
Sbjct: 255 K 255


>gi|319778835|ref|YP_004129748.1| Histidine ABC transporter, permease protein HisQ [Taylorella
           equigenitalis MCE9]
 gi|317108859|gb|ADU91605.1| Histidine ABC transporter, permease protein HisQ [Taylorella
           equigenitalis MCE9]
          Length = 228

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L     T+       V +F+LG++ ++     ++ F  +  K +  LY  T LI 
Sbjct: 5   YEGQILHGTISTIVLALSSLVVAFLLGMLTAV-----AKVFGNRFFKFIATLY--TTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P LVL+ L +                       F++  + +     AF  E  R   +
Sbjct: 58  SVPDLVLMLLIFFGIQILLNSITDAIGVDQIDLNPFVTGVLTIGFVYGAFFGETFRGAFL 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EA+IA GL+  +    ++ PQ MR  +P + + +L +LK ++L   +G  DLV
Sbjct: 118 AVPKGQYEASIAYGLSQHRTMWHIMFPQMMRYALPGVGNNWLIVLKATALVSILGLQDLV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V       T +    I +   IYL L+ +  +F+  L  + +   K+
Sbjct: 178 LVTQEAGRATQKMFLFIFVAGVIYLLLTTISNIFLYWLERRYSAGIKE 225


>gi|289674515|ref|ZP_06495405.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
 gi|302186818|ref|ZP_07263491.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|330900040|gb|EGH31459.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330977257|gb|EGH77213.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 215

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R   +   +    LYI  F   G P L+ + L +           F           + +
Sbjct: 41  RTSEKSGPRVTAKLYIELF--QGTPLLMQLFLVF-----------FGVALMGLNISPWAA 87

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +T+A++AEI R  + ++ +GQ EA+ +L LT  +  R V+LPQA+R  + P  
Sbjct: 88  AALALTLFTSAYLAEIWRGCVESISKGQWEASASLALTPFEQMRYVILPQALRIAVAPTV 147

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K +++   +GF +L   G  + N T +   +       Y  L   ++L    L
Sbjct: 148 GFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHL 207

Query: 389 NAKI 392
             ++
Sbjct: 208 ERRL 211



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG L+   R S         ++Y+E+F+  P L
Sbjct: 6   WDIVRNLLIGLQWTLALSLVAFIGGGLIGLLIMGMRTSEKSGPRVTAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGLNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|315502594|ref|YP_004081481.1| polar amino acid abc transporter, inner membrane subunit
           [Micromonospora sp. L5]
 gi|315409213|gb|ADU07330.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora sp. L5]
          Length = 291

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 21/260 (8%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            + +I F+                      +    L+    T+   A   V + + G   
Sbjct: 30  IVALIAFVVYKFNQTGQFEARKWEQFQYAAVQRELLNGLWATLKVAAVATVLALLFGAFF 89

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +      +R   +   +A     +  F    L  L+       L +  P+          
Sbjct: 90  A-----SARLSDKVLFRAPATFVVELFRAIPLLILIFFGYYVPLQYGWPI---------- 134

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               +F +L I L+ Y  + +AEI R+G+ AVP GQ E A A+G+   +  RL+LLPQA 
Sbjct: 135 ---DKFWALVIGLTLYNGSVLAEIFRAGINAVPYGQSEGAYAIGMRKNQVLRLILLPQAF 191

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSL 377
           RS++P + SQ + LLK+++L   + + +L+ VG  I  +       +   LI   IY+S+
Sbjct: 192 RSMLPAIVSQLVVLLKDTALGFIITYPELLFVGKQIGGRLAFGLPYVPTYLIVAAIYISI 251

Query: 378 SIMIALFMNRLNAKIALKEK 397
             ++++    L  ++    +
Sbjct: 252 CGLLSVLAWWLQKRLTRLPR 271



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 84/274 (30%), Gaps = 30/274 (10%)

Query: 14  SRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           S    LYD      R  N  + I+    +  +  + V                   ++  
Sbjct: 2   SSSSVLYDIPGPKARRRNRILGIVSIAAIVALIAFVVYK----------------FNQTG 45

Query: 69  GFEIDQGIVPYTSDSSYA---TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
            FE  +          YA     +L G   T  +A    + A + G    + RLS   L 
Sbjct: 46  QFEARKW-----EQFQYAAVQRELLNGLWATLKVAAVATVLALLFGAFFASARLSDKVLF 100

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
                  VE+FR IP L++IFF Y   L      D    L  G+ L N  +         
Sbjct: 101 RAPATFVVELFRAIPLLILIFFGYYVPLQYGWPIDKFWALVIGLTLYNGSVLAEIFRAGI 160

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQL 244
           NA  +  S     +       L      +  ++ LP +     ++     L  I    +L
Sbjct: 161 NAVPYGQSEGAYAIGMRKNQVLRLILLPQAFRSMLPAIVSQLVVLLKDTALGFIITYPEL 220

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            F    +G     G   V    +   I +S    
Sbjct: 221 LFVGKQIGGRLAFGLPYVPTYLIVAAIYISICGL 254


>gi|227820556|ref|YP_002824527.1| glutamine ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339555|gb|ACP23774.1| glutamine ABC transporter, permease protein GlnP [Sinorhizobium
           fredii NGR234]
          Length = 219

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 13/189 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       +AL   YI  F   G    V +   Y           F            
Sbjct: 38  LGRVSRFTAVRALATTYIEFF--RGTSIFVQLFWAY-----------FVLPFAGITLTPL 84

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  +AL     A+ AE+VR  + A+ R Q EA IAL L+  +A R ++LPQA+  ++P 
Sbjct: 85  QAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIALNLSRYQAMRHIILPQALPLMLPT 144

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  + LLK +++   +   D+      +  QTG  +      + +Y  ++ +I+L M 
Sbjct: 145 FGNNAIELLKGTAVVSLISLTDMTFQAQVVRAQTGSTLIPFATILVLYFVMAWVISLGMR 204

Query: 387 RLNAKIALK 395
            L  +++  
Sbjct: 205 WLERRVSRG 213



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 28/69 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  L   G   A ++    G GR+S    V  +   Y+E FR     V 
Sbjct: 7   YIGLILEGAWVTVQLTLMGSALAVVVAFAAGLGRVSRFTAVRALATTYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVL 153
           +F+ Y  + 
Sbjct: 67  LFWAYFVLP 75


>gi|57237730|ref|YP_178978.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter jejuni RM1221]
 gi|57166534|gb|AAW35313.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni RM1221]
 gi|315058341|gb|ADT72670.1| Putative amino acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 247

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 119/253 (47%), Gaps = 23/253 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR-GLSFPTLTMDTNAKIFVFSFVLGIV 199
            +++++  +   + +L I D S V+ +G   N +  L    +T+   A   +   ++G  
Sbjct: 13  VIIILWGYFSFPIEILKIQDPSGVVSYGYTENAKAYLKSYLITLLLTACAVIIGVIIGFS 72

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L++           KT   +   YI   +I G P ++ + +   + F             
Sbjct: 73  LAILYF-----SKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------------- 112

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + ++LPQA
Sbjct: 113 -TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKEIILPQA 171

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            ++I+P L +++++L K +S+   +   D+     ++        + I+    +Y     
Sbjct: 172 TKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLVYYVSVK 230

Query: 380 MIALFMNRLNAKI 392
           + + F  +L  ++
Sbjct: 231 IFSYFAKKLELRM 243



 Score = 39.9 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A A L  ++ T  L    +I   IIG  +     S  K + +I   Y+++ R  P ++ +
Sbjct: 45  AKAYLKSYLITLLLTACAVIIGVIIGFSLAILYFSKFKTLNFIIDEYIDIIRGTPVILQL 104

Query: 146 FFLYKSVL 153
                 + 
Sbjct: 105 MIFAFVIF 112


>gi|15965229|ref|NP_385582.1| general L-amino acid transport permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307309252|ref|ZP_07588920.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15074409|emb|CAC46055.1| Probable general L-amino acid transport permease ABC transporter
           [Sinorhizobium meliloti 1021]
 gi|306900253|gb|EFN30870.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 384

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 21/306 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   L      A +  ++V +   +P L+           +L + 
Sbjct: 92  ACWAFVNAKFAQFLFGRYPLDERWRPALVGILFVLLL--VPMLIPRIPYKGLNALLLLVA 149

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +                T          V SFV GI +SL       L R  +    
Sbjct: 150 LPILSAILLPGGWFGLTYVETPLWGGLMVTLVLSFV-GIAVSLPLGILLALGRRSNMPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L  ++I       L T VL      L    P    F+         +F+   I +S +
Sbjct: 209 KMLCTVFIEVIRGVPLIT-VLFMASVMLPLFLPQGVTFD---------KFLRALIGVSLF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+P+GQ E A +LGL+  +    ++LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPKGQYEGADSLGLSFWQKMGFIVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     + T        +  ++   F++      ++ +   +   
Sbjct: 319 DTSLVSIIGMFDLLGIVRLNFSDTNWATAVTPLTGLIFAGFVFWLFCFGMSRYSGFMERL 378

Query: 392 IALKEK 397
           +   ++
Sbjct: 379 LDRSQR 384



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G L+  GR S   ++  +C V++EV R +P + V+F  
Sbjct: 172 LWGGLMVTLVLSFVGIAVSLPLGILLALGRRSNMPVIKMLCTVFIEVIRGVPLITVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPQ 241


>gi|327462744|gb|EGF09066.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 228

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +L    L + +  +  +   ++Y++         L+L      
Sbjct: 18  PVTLIIMVVAILLSFIPALLL-ALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +                   +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +A R V+ PQA+RS +P L +  +NL+K +SL   +   D+ ++     + + Q 
Sbjct: 137 GLTNFQAYRRVVFPQALRSALPNLANLVINLVKGTSLVFVMTVKDITALAKIEASHSYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   IYL +  +I      L  + AL
Sbjct: 197 SESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + I   L+  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGIPVTLIIMVVAILLSFIPALLLALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
               S+L     S+     +F  N       + 
Sbjct: 74  SLFPSLLNQIFKSLGSQVDVFKFNPLYYAFIIY 106


>gi|311103257|ref|YP_003976110.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 4 [Achromobacter
           xylosoxidans A8]
 gi|310757946|gb|ADP13395.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 4
           [Achromobacter xylosoxidans A8]
          Length = 229

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 99/219 (45%), Gaps = 11/219 (5%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            T T+   A   V    LG +L++      +      G            +  + ++ L+
Sbjct: 21  MTFTLTLTALAGVMGLALGTLLAMMRLSRFKILSVPAG----------IYVNVMRSIPLL 70

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            + +  +F  P +  +     + +    F S  I  + + AA+  EI+R+G+ ++ RGQ+
Sbjct: 71  LVIFWFYFLVPYIAAWVVGSPTPLRVGAFNSAVITFTLFEAAYFCEIMRAGIQSIARGQV 130

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
            A++ALGL H +  R V+LPQA R+++P L ++ + L +++SL   +   D +     I 
Sbjct: 131 SASMALGLNHWQGMRYVVLPQAFRNMLPALLTRIIILFQDTSLVYVLSLTDFLGAAAKIG 190

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + G+ +E+ L    +Y  +    +  +  L  +  +  
Sbjct: 191 QRDGRLVELYLFVAVVYFVICFTASRLVKLLEKRTRVLR 229



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 71/194 (36%), Gaps = 16/194 (8%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F++    +PY            G   T  L     +    +GTL+   RLS  K+++   
Sbjct: 6   FDVIWAALPYL--------FKTGMTFTLTLTALAGVMGLALGTLLAMMRLSRFKILSVPA 57

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            +YV V R+IP L+VIF+ Y  V  +      S         N+  ++F         +I
Sbjct: 58  GIYVNVMRSIPLLLVIFWFYFLVPYIAAWVVGSPTPLRVGAFNSAVITFTLFEAAYFCEI 117

Query: 190 F---VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + S   G V +  A  L+     +      ++    F       L  I + +Q   
Sbjct: 118 MRAGIQSIARGQVSASMALGLNHWQGMR-----YVVLPQAFRNMLPALLTRIIILFQDTS 172

Query: 247 DKPVLGQFNFIGGS 260
              VL   +F+G +
Sbjct: 173 LVYVLSLTDFLGAA 186


>gi|262043352|ref|ZP_06016480.1| histidine transport system permease HisM [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259039304|gb|EEW40447.1| histidine transport system permease HisM [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 238

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 95/218 (43%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + + S V+G +L++F   + R    K  +    +++ T++  G P
Sbjct: 14  WTDGYRFTGVAITLWLLISSVVMGGILAVFL-AIGRVSSNKFIQF--PIWLFTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++     +  +          +AL+  T A+  EI    + +V 
Sbjct: 71  LYVQLLVFYSGMYTLEIVKGTELL-NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVA 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +  K  R ++LP A+R  +P  +++ + +L +++LA      DL+ + 
Sbjct: 130 AGEIEAARAYGFSSVKLYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I + T Q      I   +YL +S ++     +   +
Sbjct: 190 RDINSATYQPFTAFGIAAVLYLIISYVLISLFRKAEKR 227


>gi|51598239|ref|YP_072430.1| ABC amino acid transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|170026443|ref|YP_001722948.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186897482|ref|YP_001874594.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|51591521|emb|CAH23193.1| ABC amino acid transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|169752977|gb|ACA70495.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186700508|gb|ACC91137.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 251

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   V S + G+  ++  T L        G    +L       
Sbjct: 10  WRYLLWGTFPDGPLGGAALTVVISIMAGVTSAVLGTVLGVALAMSRGVWAGILAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 MAIGAGQWQAGLSLGFNRWQTLWFIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 224


>gi|322833890|ref|YP_004213917.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169091|gb|ADW74790.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 246

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
              +   +T+  +   ++ +F++G +  +  T  +R        + +  + +PL+     
Sbjct: 24  WIWNGFQVTVALSICAWIIAFLIGSLFGILRTVPNRILSGIGTCYVELFRNVPLIVQFFI 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+   +      +     QF           F S  I L  +TAA + E VR+
Sbjct: 84  WYLVVPELLPENIGMWFKSELAPDVQF-----------FTSSVICLGLFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++P GQ  A +A+GLT  +  R VLLP A R I+PP+TS+ +NL+KNS++A  +G  
Sbjct: 133 AIQSLPSGQRNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMVNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M+ +  K+ L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFTAITVAYVLINAVIMLLMHFVERKVRL 239



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A +IG+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWNGFQVTVALSICAWIIAFLIGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNRILSGIGTCYVELFRNVPLIVQFFIWYLVVPELLPENIGMW 99


>gi|307316994|ref|ZP_07596435.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306897082|gb|EFN27827.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 384

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 120/306 (39%), Gaps = 21/306 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   L      A +  ++V +   +P L+           +L + 
Sbjct: 92  ACWAFVNAKFAQFLFGRYPLDERWRPALVGILFVLLL--VPMLIPRIPYKGLNALLLLVA 149

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +                T          V SFV GI +SL       L R  +    
Sbjct: 150 LPILSAILLPGGWFGLTYVETPLWGGLMVTLVLSFV-GIAVSLPLGILLALGRRSNMPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L  ++I       L T VL      L    P    F+         +F+   I +S +
Sbjct: 209 KMLCTVFIEVIRGVPLIT-VLFMASVMLPLFLPQGVTFD---------KFLRALIGVSLF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+P+GQ E A +LGL+  +    ++LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPKGQYEGADSLGLSFWQKMGFIVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     + T        +  ++   F++      ++ +   +   
Sbjct: 319 DTSLVSIIGMFDLLGIVRLNFSDTNWATAVTPLTGLIFAGFVFWLFCFGMSRYSGFMERL 378

Query: 392 IALKEK 397
           +   ++
Sbjct: 379 LDRSQR 384



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 36/70 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G L+  GR S   ++  +C V++EV R +P + V+F  
Sbjct: 172 LWGGLMVTLVLSFVGIAVSLPLGILLALGRRSNMPVIKMLCTVFIEVIRGVPLITVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPQ 241


>gi|296272119|ref|YP_003654750.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096294|gb|ADG92244.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 359

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                LTM   +   V SF +GI+ +L      R  +    K + +LYI       L TL
Sbjct: 150 WGGLMLTMVVASVGIVVSFPIGIIFAL-----GRQSNMPIIKTISVLYIEFIRGVPLITL 204

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +         F   V+    F  G T   + +   I ++ + AA++AE+VR GL A+P+G
Sbjct: 205 L---------FMSSVILPLFFPEGVTFD-KLLRALIGVTLFQAAYLAEVVRGGLQAIPKG 254

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ++GL++ +A  LV+LPQA++  IP +   ++ L K+++L + +G  D++++   
Sbjct: 255 QYEAADSVGLSYWQAMGLVILPQALKISIPNIVGSFVALFKDTTLVLIIGLFDVLAMVTL 314

Query: 356 IINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +     G   E  +    IY  +   ++ +   +  +     K
Sbjct: 315 TTSDPHWLGFETEGYVFVTMIYWIICFTMSKYAQSVENRFNTDHK 359


>gi|271498818|ref|YP_003331843.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270342373|gb|ACZ75138.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 362

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 18/277 (6%)

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           LV  +  +    +RN+P       ++  V  +L              +  R     TLT+
Sbjct: 99  LVLALISILPMFWRNLPRRGRYIAIWCVVYPLLAWWLLFGGFGGLSRVETRQWGGLTLTI 158

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A     +  LGI+L+L      R  +    +AL +++I  +    L T++ ++    
Sbjct: 159 IIAAIGIAGALPLGILLAL-----GRRSNMPVLRALCVIFIEFWRGVPLITVLFMS---- 209

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L
Sbjct: 210 ------SVMLPLFLTEGTNIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAQSL 263

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQT 360
            L + +   LV+LPQA++ +IP L +  + L K++SL + +G  DL S            
Sbjct: 264 ALGYWRMQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSIQQATVDPAWL 323

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G + E  +    IY      ++ +   L  +     K
Sbjct: 324 GMSTEGYVFAAIIYWIFCFSMSRYSQHLEKRFDTGHK 360


>gi|153815715|ref|ZP_01968383.1| hypothetical protein RUMTOR_01953 [Ruminococcus torques ATCC 27756]
 gi|317501901|ref|ZP_07960085.1| amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088284|ref|ZP_08337203.1| hypothetical protein HMPREF1025_00786 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846956|gb|EDK23874.1| hypothetical protein RUMTOR_01953 [Ruminococcus torques ATCC 27756]
 gi|316896581|gb|EFV18668.1| amino acid ABC transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330408528|gb|EGG87994.1| hypothetical protein HMPREF1025_00786 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 236

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 101/212 (47%), Gaps = 12/212 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V   ++G V++            +    +  +Y++ F   G P +V + + Y +  
Sbjct: 36  IVGLVIGILIGTVIATARVLPKYKVLPRVLNGICSVYVAMF--RGTPMVVQLLVFYYVLL 93

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +  +N  G            +     + A+I+EI+RSG+ +V  GQMEA  A+GL+
Sbjct: 94  P---IIGWNITGVQV-------AMLVFGLNSGAYISEIMRSGIQSVDAGQMEAGRAVGLS 143

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              +   +++PQA+++I+P L ++++ L+K +S+   VG ADL      I   + + +  
Sbjct: 144 FGASMMKIVIPQAVKNILPTLGNEFIALIKETSVVSFVGAADLYVAFNYIGTNSYEFMVP 203

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L+   IY++L +++ L +  L   +   +++
Sbjct: 204 YLVMALIYIALILVVTLLVKLLERSLKKSDRR 235



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVFRNIPPLVV 144
           + G  NT  +A  G++   +IGT++   R+        +++  IC VYV +FR  P +V 
Sbjct: 25  VQGLQNTVLIAIVGLVIGILIGTVIATARVLPKYKVLPRVLNGICSVYVAMFRGTPMVVQ 84

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMF 170
           +   Y  +L ++      + +   +F
Sbjct: 85  LLVFYYVLLPIIGWNITGVQVAMLVF 110


>gi|116252500|ref|YP_768338.1| transmembrane permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115257148|emb|CAK08243.1| putative transmembrane permease component of ABC transporter
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 268

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 17/213 (7%)

Query: 192 FSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
               +G +++L         RL+   +    + LP L     + +G+  L+   L +  +
Sbjct: 66  IGLAIGFLVALGQQSEEKPLRLAAGIYTTIFRGLPELLTLFIIYYGMQMLIQSLLTFVGY 125

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P+               F++  IALS   +A+ +E++ S   A+P+GQ EA  ALGL
Sbjct: 126 DGPPIEIN-----------AFLAGVIALSVVFSAYCSEVLLSAFHAIPKGQYEAGDALGL 174

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD++      +  T +   
Sbjct: 175 HRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTKEPFF 234

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +   +YL L+I+ +  +  +       E +
Sbjct: 235 FYGVACCLYLVLAILSSFLLVYVERWAKRSEVR 267



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 7/169 (4%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q  +    D+ +   I +G   T  +A   +     IG LV  G+ S  K +     +
Sbjct: 32  LGQSTILACGDTGWGDEIALGLQVTVSVAIVTLPIGLAIGFLVALGQQSEEKPLRLAAGI 91

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR +P L+ +F +Y  +  ++        L   +  +   +          A   V
Sbjct: 92  YTTIFRGLPELLTLFIIYYGMQMLI------QSLLTFVGYDGPPIEINAFLAGVIALSVV 145

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           FS     VL L A         + G AL L    T  +  LP LV IAL
Sbjct: 146 FSAYCSEVL-LSAFHAIPKGQYEAGDALGLHRGRTLRLIILPQLVRIAL 193


>gi|269968080|ref|ZP_06182117.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           40B]
 gi|269827326|gb|EEZ81623.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           40B]
          Length = 222

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++   S V+G +L+L  T             +    I+ F   
Sbjct: 1   MNEQHVWQMLDGLGTSLQLTAASLVVGCLLALMMTLTL-ILRTPGLHWVSRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +  F   + +S  +    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDAVRESVF--WTWLSQPWFCAMLALALNTAAYSTQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPSGQWQACRALGMNKTATL-KVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|302537323|ref|ZP_07289665.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
 gi|302446218|gb|EFL18034.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
          Length = 296

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 16/270 (5%)

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL-PFGMFLNNRGLSFPTLTMDTNAK 188
            +Y   F  +  L   + L           D        G   +   +     T+   A 
Sbjct: 18  WIYTAGFLVLFALAAWWILSVMGEKHQLDADKWTPFVTDGRIWSTYLIPGLLETLKAGAI 77

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             V +  LG +L      + R       +    + +  F    +  L++    + + F  
Sbjct: 78  AMVIALPLGALLG-----MGRLSDHAWVRVPVGVVVEFFRAIPVLMLMMFGYAFFVRFIP 132

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            V   F  +          ++   L  Y A+ IAEIVR+G+ ++PRGQ +AA A+G+   
Sbjct: 133 AVSSDFRPVY---------AVVTGLVLYNASVIAEIVRAGVQSLPRGQTDAAKAIGMRKG 183

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEII 367
           +    VL+PQA+ +++P L SQ + +LK+++L    +G  DL++    I       I  +
Sbjct: 184 QTMVHVLIPQAVTAMLPALVSQLVVILKDTALGGSLLGLTDLLAANRQISANYSNTIATL 243

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++   IY++++  +  F + +  ++   +K
Sbjct: 244 VVVALIYIAVNFALTSFASWMEGRLRKSKK 273



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 62/179 (34%), Gaps = 21/179 (11%)

Query: 16  MKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N        +L  +   W ++                 + E+   
Sbjct: 2   SSVLYDVPGPKAKTRNWIYTAGFLVLFALAAWWILSV----------------MGEKHQL 45

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           + D+     T    ++T ++ G + T       M+ A  +G L+G GRLS +  V     
Sbjct: 46  DADKWTPFVTDGRIWSTYLIPGLLETLKAGAIAMVIALPLGALLGMGRLSDHAWVRVPVG 105

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           V VE FR IP L+++ F Y   +  +P         + +       +   +     A +
Sbjct: 106 VVVEFFRAIPVLMLMMFGYAFFVRFIPAVSSDFRPVYAVVTGLVLYNASVIAEIVRAGV 164


>gi|253990628|ref|YP_003041984.1| glutamate/aspartate transport system permease protein gltk
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782078|emb|CAQ85242.1| glutamate/aspartate transport system permease protein gltk
           [Photorhabdus asymbiotica]
          Length = 224

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + F    +   AKI + + V+GI+       + R    K       LY
Sbjct: 1   MYEFDWSSIVPSIPFLLQGLVITAKITIIAVVVGILWGTAL-AVMRLSSVKVLSWFATLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A + + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--IVPSLVQNVLGISPKTDIRLISAMVAFAFFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R++ P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTPMQSMRLVILPQAFRAMTPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD       I  + G  +E+IL    +Y  +SI  ++ +N L  +
Sbjct: 175 LSLADFFRTAANIGERDGTQVEMILFAGLVYFIISIAASMLVNYLKKR 222



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 40/70 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++   + GT +   RLS+ K+++W   +YV +FR++P ++V+ + 
Sbjct: 16  LLQGLVITAKITIIAVVVGILWGTALAVMRLSSVKVLSWFATLYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVLPI 158
           Y  V S++  
Sbjct: 76  YLIVPSLVQN 85


>gi|282862285|ref|ZP_06271347.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282562624|gb|EFB68164.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 291

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 109/279 (39%), Gaps = 30/279 (10%)

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
              +V       V     +  L V          + P             +         
Sbjct: 12  PKAVVRNRVYAVVGSLAIVALLAVGVMRLADKGHLAPEMWDIFNYSG---IRQNIADGIL 68

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+       V S VLG+VL++      R    K  + L   +I  F      ++ L+  
Sbjct: 69  ATLKVFGLAAVGSLVLGVVLAV-----GRLSDHKPVRWLATGFIELFR-----SIPLLIT 118

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +              G        +L   LS Y     AE++R+G+ +VP+GQ EAA
Sbjct: 119 IYAIWV------------GFLTDYSMWALAAGLSVYNGCVQAEVLRAGVNSVPKGQSEAA 166

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG++  +    VL+PQA+R+++P + SQ +  LK++SL   + + +L++    I + T
Sbjct: 167 YALGMSKTQVMVGVLIPQAVRAMLPTIISQLVVTLKDTSLGYIILYPELLNSARLIASNT 226

Query: 361 -----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                   +  I++   IY+++ ++++     +  +   
Sbjct: 227 LVNGQYPYVSTIVVIGVIYVAMCLLLSALATWIEKRGRR 265



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 37/65 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G + T  +     + + ++G ++  GRLS +K V W+   ++E+FR+IP L+ I+ +
Sbjct: 63  IADGILATLKVFGLAAVGSLVLGVVLAVGRLSDHKPVRWLATGFIELFRSIPLLITIYAI 122

Query: 149 YKSVL 153
           +   L
Sbjct: 123 WVGFL 127


>gi|251790178|ref|YP_003004899.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247538799|gb|ACT07420.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 231

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 7/217 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F   L     +          ++ + +++L + ++L    + R    +    L   
Sbjct: 1   MALDFSTVLTGHYGAMVVQGATVTLELALGAWLLAMFIALLLLVI-RLTEHRVATRLVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYIALSCYTAAFI 281
           YIS      +PTL+ + + Y   F  P L   +  G     + EF+    AL    AA+ 
Sbjct: 60  YIS--YHRNVPTLIQLMMWY---FAIPTLLPESVQGWINAFNAEFLFSMFALGLCQAAYF 114

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +RSGL A+P GQ EAA ALG+++ +A R V+LPQ +R+ +P L +  + L KN+SLA
Sbjct: 115 SEDIRSGLRAIPDGQNEAARALGMSYMRAMREVILPQGIRNALPALINHTVLLFKNTSLA 174

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + +G A+L  V   I NQT    E  +I    YL+ S
Sbjct: 175 MVIGVAELTYVTRDIENQTFHTFEAYVIGTLGYLAFS 211



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   T  LA    + A  I  L+   RL+ +++   +   Y+   RN+P L+ 
Sbjct: 13  YGAMVVQGATVTLELALGAWLLAMFIALLLLVIRLTEHRVATRLVAAYISYHRNVPTLIQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +   Y ++ ++LP      +  F
Sbjct: 73  LMMWYFAIPTLLPESVQGWINAF 95


>gi|86742204|ref|YP_482604.1| amino acid ABC transporter permease [Frankia sp. CcI3]
 gi|86569066|gb|ABD12875.1| amino acid ABC transporter membrane protein 2, PAAT family [Frankia
           sp. CcI3]
          Length = 293

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 20/233 (8%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               V      L     +    T+       +F+  +G +L+L     +R    +  +  
Sbjct: 50  KRWSVFVDQPALRTLLWNGLLDTLRAALTAMLFASAVGTLLAL-----ARLSRRRAVRIP 104

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             L +  F    +  L+L A     +   P L              F +L I L+ Y  A
Sbjct: 105 ATLLVELFRSLPVLMLILFA-----YLGLPAL--------GWRLSAFWALVIGLTAYNGA 151

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            ++EI R+G+ +V RGQ EAA A+GL   +  RL+  PQA+R + P L SQ + LLK++S
Sbjct: 152 VLSEIFRAGIQSVDRGQTEAAAAVGLRPVQIFRLIQFPQAIRRMSPTLVSQLVTLLKDTS 211

Query: 340 LAVAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           L   + +++L+  G   +   G   A+ I  +   +Y+  + +++L    L+ 
Sbjct: 212 LGYVIAYSELLRSGRGAVEYLGSRYALPIYTVMAVMYIVTNGLLSLLARWLDR 264



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 47/101 (46%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +    +    +  T +  G ++T   A + M+ A+ +GTL+   RLS  + V     + 
Sbjct: 49  GKRWSVFVDQPALRTLLWNGLLDTLRAALTAMLFASAVGTLLALARLSRRRAVRIPATLL 108

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           VE+FR++P L++I F Y  + ++         L  G+   N
Sbjct: 109 VELFRSLPVLMLILFAYLGLPALGWRLSAFWALVIGLTAYN 149


>gi|42518507|ref|NP_964437.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41582792|gb|AAS08403.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|329666777|gb|AEB92725.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 214

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 15/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L           +IF ++ V+ I L L    ++   H K      +L    ++I 
Sbjct: 4   YIFSILPSLFSGAWLTIEIFFWTTVVSIPLGLL---VAFGLHSKLKLVKAILKFYVWIIR 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   +                   V P + +  +A     AA+ AEI R GL 
Sbjct: 61  GTPLLLQLIFIFY-----------GLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQ 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ EAA  LGL+  +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+
Sbjct: 110 AVPVGQFEAAQVLGLSRWQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLL 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G     +    +  +++   +YL+++ ++   +  +  +
Sbjct: 170 RAGNVATARDVSLVP-LVLVGCVYLAMTAVLTALLRVVEKR 209



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   ++  G   T  + F   + +  +G LV  G  S  KLV  I + YV + R  P L+
Sbjct: 7   SILPSLFSGAWLTIEIFFWTTVVSIPLGLLVAFGLHSKLKLVKAILKFYVWIIRGTPLLL 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            + F++  + +V  +            +N              A   
Sbjct: 67  QLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPV 113


>gi|16764249|ref|NP_459864.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|167992141|ref|ZP_02573239.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168263592|ref|ZP_02685565.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|16419396|gb|AAL19823.1| arginine 3rd transport system [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205329618|gb|EDZ16382.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205347683|gb|EDZ34314.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|261246143|emb|CBG23946.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267992650|gb|ACY87535.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157470|emb|CBW16960.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312911915|dbj|BAJ35889.1| arginine ABC transporter permease protein ArtM [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321223249|gb|EFX48318.1| Arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|323129192|gb|ADX16622.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
          Length = 222

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S  + +VL+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTII---LTLKTPFVVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPLLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCSALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVV-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +  A ++  +           V W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|134288196|ref|YP_001110359.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134132846|gb|ABO59556.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 237

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 91/214 (42%), Gaps = 4/214 (1%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           +    +   A + V S  +G V+S+    ++R       +    ++  T++  G P  + 
Sbjct: 18  YHMTGVAMTAWLLVASVAIGFVMSVPL-SVARVSSNPFVRGP--VWFFTYVFRGTPLYIQ 74

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           + + Y   +   V+     +             +AL+  T A+  EI    + ++P G++
Sbjct: 75  LLIFYSGIYSLNVVRSHELLD-RVFREGINCTILALALNTCAYTTEIFAGAIKSIPYGEI 133

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A G++       +++P A+R  +P  +++ + +L  ++LA      D++ V   + 
Sbjct: 134 EAARAFGMSPWVLYTRIIIPSALRRALPYYSNEVILMLHATTLAFTATVPDILKVARDVN 193

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + T  + E   I   +Y  ++ ++     +   +
Sbjct: 194 SATYASFEAFGIAAVLYACIAFVLVWMFRKFEHR 227


>gi|292488872|ref|YP_003531759.1| histidine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292900017|ref|YP_003539386.1| histidine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291199865|emb|CBJ46989.1| histidine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291554306|emb|CBA21657.1| Histidine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 228

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 VF+ +LG++ +      SR           +  + T LI G+P LVL+ L +  
Sbjct: 19  LALSSVVFAVLLGLIGAAAKLSNSRPLA-------AMSEVYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F          ++  I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 72  LQIALNQLTDFFSFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWMAVPKGQLEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTRSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  +  +  K+
Sbjct: 192 WFAIVAGVIYLIFTTLSNGVLWWLERRYTVGVKR 225



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I  G + T  LA S ++ A ++G +  A +LS ++ +A +  VY  + R +P LV+
Sbjct: 5   YSEVIFKGALVTLELALSSVVFAVLLGLIGAAAKLSNSRPLAAMSEVYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|163789692|ref|ZP_02184129.1| glutamine ABC transporter, permease protein [Carnobacterium sp.
           AT7]
 gi|159874914|gb|EDP68981.1| glutamine ABC transporter, permease protein [Carnobacterium sp.
           AT7]
          Length = 216

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 19/228 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T++      VFSF++G +L L        F +  G  + L+    
Sbjct: 7   FSWMNIRFLLDGLLVTVEVALLSIVFSFIIGAILGLLRYMKIPVFSKIIGAIVDLIRN-- 64

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                   L L+ + +  +F  P +              F S   AL+ + +A ++EI+R
Sbjct: 65  --------LPLLLIIFFTYFALPQI--------GIRFDIFWSAVAALTIFESAMLSEIIR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL +VP GQMEA  + GL++ +    +L+PQA ++++PP+ SQ ++L+K++SLA  +  
Sbjct: 109 AGLNSVPSGQMEAGRSTGLSYLQTLWFILIPQAFKAMVPPIVSQLISLIKDTSLATIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +L      I  Q T   I + +   F Y  +   ++    R   K+A
Sbjct: 169 PELTHNARIIYGQNTTYVIPMFIALAFFYFIICYALSKVAKRFETKLA 216



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 38/83 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G + T  +A   ++ + IIG ++G  R     + + I    V++ RN+P 
Sbjct: 8   SWMNIRFLLDGLLVTVEVALLSIVFSFIIGAILGLLRYMKIPVFSKIIGAIVDLIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV 164
           L++IFF Y ++  +    D    
Sbjct: 68  LLIIFFTYFALPQIGIRFDIFWS 90


>gi|56751274|ref|YP_171975.1| amino acid ABC transporter permease [Synechococcus elongatus PCC
           6301]
 gi|56686233|dbj|BAD79455.1| permease protein of amino acid ABC transporter [Synechococcus
           elongatus PCC 6301]
          Length = 396

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 26/265 (9%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
             R +P L  + FL    L    +    +             S   LT+ T     V S 
Sbjct: 155 WLRFLPTLWGVLFLVGLWLLQGGLGLRPVSSND--------WSGLLLTLATALISMVCSL 206

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            LGI+L+L      R       + L + YI  F       L L+ + +      P++   
Sbjct: 207 PLGILLAL-----GRQSSLPAIRWLSVTYIELFR-----GLPLVTILFFGQVMVPLM--- 253

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +         +   + L+ + +A++AE VR GL A+P+GQ EAA ALGL   +  R +
Sbjct: 254 --LDSEWRIDRILRAIVGLTIFLSAYLAETVRGGLQAIPQGQFEAAAALGLDLFQTYRFI 311

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWM 371
           +LPQA+R  IP +   +LNLL++++L   VG  +L+ +  +I+      G+  E+ L   
Sbjct: 312 VLPQALRISIPAIVGLFLNLLQDTTLLSIVGLLELLGISRSILANPAYLGRYAEVYLFLG 371

Query: 372 FIYLSLSIMIALFMNRLNAKIALKE 396
            +Y      +A    RL  ++  + 
Sbjct: 372 VLYWLCCYGLAQLSRRLEQRLTPQR 396


>gi|13475941|ref|NP_107511.1| amino acid ABC transporter protein, permease protein [Mesorhizobium
           loti MAFF303099]
 gi|14026701|dbj|BAB53297.1| amino acid ABC transporter protein, permease protein [Mesorhizobium
           loti MAFF303099]
          Length = 219

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M   +  L           ++ +   VL ++++  A  + R       +AL   YI  F 
Sbjct: 1   MTQWSGYLGLILQGALVTIELTLMGSVLSLIMAFLAG-MGRLSRFFALRALATAYIEFF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   Y   F  P++                +  +AL     A+ AE+VR  
Sbjct: 59  -RGTSIFVQLFFAY---FVLPLI--------GLELTPLQAGVLALGLNVGAYAAEVVRGA 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ R Q EA IAL L   +  R V+LPQA   ++P   +  + LLK +S+   +  AD
Sbjct: 107 VQSIGREQHEACIALNLGRWQGLRHVILPQAFLVMLPTFGNNAIELLKATSVVSLISLAD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L      +  QTG  +      + IY  L+++I+  +  L  ++A  
Sbjct: 167 LTFQAQVVRAQTGNTMVPFATILVIYFVLALLISWGVRSLERRMARG 213



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G + T  L   G + + I+  L G GRLS    +  +   Y+E FR     V 
Sbjct: 7   YLGLILQGALVTIELTLMGSVLSLIMAFLAGMGRLSRFFALRALATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSV 155
           +FF Y  +  +
Sbjct: 67  LFFAYFVLPLI 77


>gi|329298831|ref|ZP_08256167.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 229

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 94/198 (47%), Gaps = 1/198 (0%)

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +    R        T  A  L  ++T   F    ++    +  +     V      +   
Sbjct: 13  APAYGRWISWIVVLTLAANGLWLVATNPNFEWRVVLQWFTEGSVLKGLQVTLGLTVVSDG 72

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
              P   +     +   AA++AEI+R+GL++V  GQ+E   A G++  +A R +++PQAM
Sbjct: 73  AGHPAGAAAGGL-ALNEAAYMAEIIRAGLLSVDHGQVETTQAFGMSRSRALRRIIIPQAM 131

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+IIPP  +Q ++++K +SL   +   DL+     + N+T + I ++++ +  YL ++ +
Sbjct: 132 RAIIPPTGNQLISMIKATSLVSVIAMGDLLYSVQAVYNRTFEIIPMLMVAVIWYLLITSI 191

Query: 381 IALFMNRLNAKIALKEKK 398
           + +  + +    A   K+
Sbjct: 192 LNVGQSAIERYYARGSKR 209


>gi|322381529|ref|ZP_08055508.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154536|gb|EFX46833.1| glutamine ABC transporter-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 202

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 101/209 (48%), Gaps = 19/209 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   V SF++G +L +      R+        L LL++          L L+ + + 
Sbjct: 9   WMAAVSIVLSFIIGSILGIL-----RYTRIPVVSQLVLLWVEMIRN-----LPLLLIIFF 58

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F  P +                S  IAL+ + +A I+EI+R GL ++ +GQ+EAA + 
Sbjct: 59  VRFALPEV--------GIKFDVITSAIIALTVFESAMISEIIRGGLNSIEKGQIEAARSS 110

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +    ++ PQA++ ++PP  SQ+++LLK++SLAV +   DL+     +  Q    
Sbjct: 111 GLTYIQTLWHIIFPQAVKRMVPPTVSQFISLLKDTSLAVIISAPDLMRNVEIVTAQNSNY 170

Query: 364 -IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I + +    +Y  ++ ++++   R   +
Sbjct: 171 VIPVFVFAAILYFVVNYILSVMAKRFELR 199



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 42/69 (60%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T W+A   ++ + IIG+++G  R +   +V+ +  ++VE+ RN+P L++IFF+  +
Sbjct: 3   GFGITLWMAAVSIVLSFIIGSILGILRYTRIPVVSQLVLLWVEMIRNLPLLLIIFFVRFA 62

Query: 152 VLSVLPIPD 160
           +  V    D
Sbjct: 63  LPEVGIKFD 71


>gi|229591464|ref|YP_002873583.1| putative ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229363330|emb|CAY50452.1| putative permease component of ABC transporter [Pseudomonas
           fluorescens SBW25]
          Length = 276

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 18/247 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
                 L    + D    L          L    LT+         S  LG     FAT 
Sbjct: 41  MFLSFDLKFAIVADKWQNLVGLHLSPQGFLQGAALTLFLCFCSIWLSLALG-----FATA 95

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+R  +      +   Y S F    L          Q+      L Q   + G+      
Sbjct: 96  LARLSNSAVAFGIASFYASFFRGTPLLI--------QILLIYLGLPQLGVVPGAI----- 142

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  IALS    A+++EI R+G++ V +GQ  AA ALG+        ++LPQAMR+IIPP
Sbjct: 143 SAGIIALSLNYGAYLSEIFRAGILGVSQGQRNAASALGMGRAVTFWQIVLPQAMRTIIPP 202

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            TSQ++++LK+SSL   +G  +++ +  +    + + IE++     IY  LSI + L   
Sbjct: 203 TTSQFISMLKDSSLVSVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVIYWLLSIGLELIQA 262

Query: 387 RLNAKIA 393
           RL     
Sbjct: 263 RLERHYG 269



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 32/85 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +L F  +  +  +G      RLS + +   I   Y   FR  P L+ I  +
Sbjct: 69  FLQGAALTLFLCFCSIWLSLALGFATALARLSNSAVAFGIASFYASFFRGTPLLIQILLI 128

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +  +P         + LN 
Sbjct: 129 YLGLPQLGVVPGAISAGIIALSLNY 153


>gi|212213032|ref|YP_002303968.1| arginine transport system permease protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011442|gb|ACJ18823.1| arginine transport system permease protein [Coxiella burnetii
           CbuG_Q212]
          Length = 223

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 2/169 (1%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F+I G P LV I + Y        L +   I  S +   F    IAL+  T+A+   
Sbjct: 52  VFVFIIRGTPLLVQIFIIYYGSGQFHWLRE--TILWSVLKRPFGCAIIALAINTSAYTTV 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P GQ+EAA ALGL+  KA + +++P+A+  ++P  +++ + +LK +SLA  
Sbjct: 110 LLRGAIRSIPTGQIEAAKALGLSRWKAYQRIIIPRAICIVLPAYSNEVIMILKGTSLAGT 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+
Sbjct: 170 ITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKL 218


>gi|188533325|ref|YP_001907122.1| Histidine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028367|emb|CAO96228.1| Histidine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 238

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 85/189 (44%), Gaps = 3/189 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               ++R    KT +    +++ T++  G P  V + + Y   +   V+     +  +  
Sbjct: 42  LLLSIARVSPYKTVRFP--VWLFTYIFRGTPLYVQLLVFYSGMYTLEVVKGTELL-NAFF 98

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                   +AL+  T A+  E+    + AVP G++EAA A G +  K  R +++P A+R+
Sbjct: 99  RSGLNCTLLALTLNTCAYTTEVFAGAIRAVPHGEIEAARAYGFSTFKLYRCIIMPSALRT 158

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P  +++ + +L +++LA      DL+ V   I + T Q      I   +YL +S  + 
Sbjct: 159 ALPAYSNEVILMLHSTALAFTATVPDLLKVARDINSATYQPFIAFGIAAVLYLIISYALI 218

Query: 383 LFMNRLNAK 391
               +   +
Sbjct: 219 SLFRKAEKR 227


>gi|107028495|ref|YP_625590.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686491|ref|YP_839738.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105897659|gb|ABF80617.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652206|gb|ABK12845.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 248

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPRWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    IYL L+ ++   +  L  +++
Sbjct: 197 VFVCAAIIYLGLNFIVVRVLGALEWRLS 224


>gi|307299191|ref|ZP_07578992.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306914987|gb|EFN45373.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 223

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 18/224 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L    +T++      V  F++G++L++     +R +  K    +    I   +I 
Sbjct: 11  YWPKFLEGLGVTLEMTLIAVVIGFIIGVILAI-----ARVYGNKLFHGVATAIIE--IIR 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV + + Y                       F +  I  +  +  + AE +R  + 
Sbjct: 64  GTPLLVQLFILYY-----------GLPPLGMNLSPFAAAIIGFAINSGCYQAEYLRGSIQ 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++   QM+AA +LG+T  +A   +++PQA R +IP  T++++ LLK +SLA  VG  +L+
Sbjct: 113 SISGNQMKAARSLGMTKWQAILQIIMPQAFRRVIPAWTNEFIYLLKYTSLAYIVGAPELM 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +    I ++  Q  E+ L+   IYL + +      + L  K+ +
Sbjct: 173 AQAKFIASRNFQFFEVYLVVAVIYLVVVLFFTKIFSILEKKVEI 216



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y    L G   T  +    ++   IIG ++   R+  NKL   +    +E+ R  P LV
Sbjct: 10  NYWPKFLEGLGVTLEMTLIAVVIGFIIGVILAIARVYGNKLFHGVATAIIEIIRGTPLLV 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +F LY  +  +            G  +N
Sbjct: 70  QLFILYYGLPPLGMNLSPFAAAIIGFAIN 98


>gi|300172349|ref|YP_003771514.1| L-cystine permease [Leuconostoc gasicomitatum LMG 18811]
 gi|299886727|emb|CBL90695.1| L-cystine permease protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 248

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/236 (21%), Positives = 103/236 (43%), Gaps = 7/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F   L  +        +     + + S ++G+++        +  +    K +  +
Sbjct: 1   MNSFFQPHLIWQYFPDVLSALPVTLLLTLVSTIIGVIVG-AGIAYVKMENTPFLKQIAAV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           + S   I G P L+ + L Y   +  P    +  I    V+   + L+I      AAF++
Sbjct: 60  FTSF--IRGTPILIQMFLVY---YGLPFFLGYVGIDADDVN-ALVYLFITYGLNMAAFLS 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+ L +VP  Q EAA+  G T R+    ++ PQA+   +P   +  ++LL+++SLA 
Sbjct: 114 EIIRAALESVPATQREAALTSGYTKRQMYFKIIFPQAVIIAMPSFATMVISLLQDTSLAF 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  D+V     +   T   +E  +  M I++ LS ++      +  +     ++
Sbjct: 174 TIGVIDVVGKAKALGTATFHTVEAYISAMIIFVILSFILERLFRWIEKRSNYSSRQ 229


>gi|262404204|ref|ZP_06080759.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. RC586]
 gi|262349236|gb|EEY98374.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           sp. RC586]
          Length = 246

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 89/215 (41%), Gaps = 22/215 (10%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------------- 248
               L++    +  + +  LY  T +I G+P LVL+ L +                    
Sbjct: 34  MLGALAKMAPYRWARWVATLY--TTIIRGIPDLVLMMLIFFGGQIFLNNGLSIFNEFLNQ 91

Query: 249 ------PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P     +++        F++  + +     A++AE  R  ++AV +G++EAA A
Sbjct: 92  WFIGRDPNHEWVSYVPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKA 151

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G++   + R +LLPQ +R  IP   + +L LLK ++L   +G  D+V +       T  
Sbjct: 152 YGMSSAMSFRRILLPQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKM 211

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +    I+L  + +    +  +  K ++  +
Sbjct: 212 PFTFYMAVAIIFLFFTSVSTGLLKLIERKFSIHTR 246



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G + T  +A   ++ A ++G L    +++  +   W+  +Y  + R IP LV+
Sbjct: 7   YEASIAKGALVTIEVALLSLLLAVVLGMLGALAKMAPYRWARWVATLYTTIIRGIPDLVL 66

Query: 145 IF--------FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +         FL   +       +   +           +          A +    F+ 
Sbjct: 67  MMLIFFGGQIFLNNGLSIFNEFLNQWFIGRDPNHEWVSYVPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|70730425|ref|YP_260166.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344724|gb|AAY92330.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 241

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 2/190 (1%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    +  +     Y  T LI G+P LVL+ L +                       F+
Sbjct: 50  AKLSPLRLLQIPATCY--TTLIRGVPDLVLMLLIFYSLQGWLTALTELLDWPYMEIDPFV 107

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L     A+  E  R  +++VPRGQ EAA A GL+  +  R V+ PQ MR  +P L
Sbjct: 108 AGIVTLGFIYGAYFTETFRGAILSVPRGQQEAAAAFGLSRMQRFRHVVFPQMMRFALPSL 167

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +L LLK ++L   +G  DLV V       T   ++ +L+   +YL ++      + R
Sbjct: 168 GNNWLVLLKATALVSIIGLTDLVKVAQEAGKSTFNMLDFLLLAAALYLLITSASNQLLRR 227

Query: 388 LNAKIALKEK 397
           L        +
Sbjct: 228 LERHYNQGVR 237


>gi|56962547|ref|YP_174273.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908785|dbj|BAD63312.1| glutamine ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 217

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 18/219 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                  +T+       + S+V+GIVL +        F    G A+ ++           
Sbjct: 14  YLWEGFQVTLLLALIAIICSYVVGIVLGILRYAKIPVFSRVLGAAVDIIRC--------- 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L L+ + +  HF       F           F++  +AL+ +  A I+EI+RSGL ++P
Sbjct: 65  -LPLLLILFFTHFVLLPELGFQV-------SPFVAAIVALTVFEGAMISEIIRSGLNSIP 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ+EAA + GLT+ +  R +L+PQA R ++PP  SQ++ LLK++SLAV +   +++   
Sbjct: 117 KGQIEAARSSGLTYTQTLRAILIPQAARKMMPPTVSQFIALLKDTSLAVIITLPEVMHHA 176

Query: 354 GTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +      +   I+     +Y  ++  ++    +L AK
Sbjct: 177 RILSAHNSNSVFAILFFVAVMYFVVNFALSKIAKKLEAK 215



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 36/72 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S    +  GF  T  LA   +I + ++G ++G  R +   + + +    V++ R +P 
Sbjct: 8   TPSNLLYLWEGFQVTLLLALIAIICSYVVGIVLGILRYAKIPVFSRVLGAAVDIIRCLPL 67

Query: 142 LVVIFFLYKSVL 153
           L+++FF +  +L
Sbjct: 68  LLILFFTHFVLL 79


>gi|312868069|ref|ZP_07728273.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096473|gb|EFQ54713.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 230

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 113/236 (47%), Gaps = 8/236 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++ + +      L      +     + V + VLG    L  T  ++   +K G  L   Y
Sbjct: 1   MVSYDISKVWSFLPTLVQALPATLALMVLTTVLGSAFGLVLT-WAQVSEDKVGAGLAKGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T           I L + + +  P    +          +F+ + +A+    AA I+E
Sbjct: 60  VFTLRCTPP-----IVLLFLVFYGLPQFLNWWLGIDIDHWSKFVFVLVAMFLLFAAMISE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + ++  +A+P+GQMEA +++GLT  +    ++LPQA R  +P +T+  LNL+++++LA  
Sbjct: 115 VFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYT 174

Query: 344 VGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GF D++  G  +I++     ++E       IY  ++++I+     L  ++++ E+
Sbjct: 175 IGFIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIALVISFSAQLLEKRLSVTER 230


>gi|168218287|ref|ZP_02643912.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens NCTC 8239]
 gi|182379709|gb|EDT77188.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens NCTC 8239]
          Length = 213

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + L    +     T+       + S  LGI++++      R  + K    +  LY+
Sbjct: 1   MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAIL-----RLSNIKIVNFISSLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ +   +   F  P++              F +  IA +   AA+  EI
Sbjct: 56  --LVMRGTPLLLQLIFIF---FGLPII--------GVSIDRFPAAIIAFTLNYAAYFGEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+  + RGQ EA+  LGL+     + ++LPQ+ +  +P + ++ + L+K++SL   V
Sbjct: 103 FRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVV 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +L+  G    N+    + +  I   IYL L  ++    +RL  K 
Sbjct: 163 GIGELLRAGKIASNRDASLLPLFSI-GIIYLLLIAVLTKIFDRLEKKY 209



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G  NT  +    ++ +  +G +V   RLS  K+V +I  +YV V R  P L+ + F+
Sbjct: 11  IIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  +  +    D          LN 
Sbjct: 71  FFGLPIIGVSIDRFPAAIIAFTLNY 95


>gi|227873776|ref|ZP_03992005.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227840392|gb|EEJ50793.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 220

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                FS VLGI++++         + +     PL       + G P +  +   Y    
Sbjct: 26  LIATFFSLVLGILIAII-------SYYQVPILNPLCKFLVSFMRGTPIVAQLYFFYFGLA 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              VL                ++   LS    AF++E +R  L++V  GQ EAA++LG+T
Sbjct: 79  VYSVL--------VRDMTPISAVAFVLSVNVGAFMSESIRGALMSVEEGQKEAALSLGMT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H +    ++LPQA+R  IPPL + ++NL+K+SSLA  +G  D++    T  +Q+ +  E+
Sbjct: 131 HFQVVYRIVLPQAIRVAIPPLFNDFINLIKSSSLAFMLGVPDIMGAARTEGSQSYRYFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
               M +Y  +      F   +  ++ 
Sbjct: 191 YGAVMLVYWVVISFFDFFRKIVEKRLK 217


>gi|209809239|ref|YP_002264777.1| binding-protein-dependent transport system inner membrane component
           [Aliivibrio salmonicida LFI1238]
 gi|208010801|emb|CAQ81198.1| binding-protein-dependent transport system inner membrane component
           [Aliivibrio salmonicida LFI1238]
          Length = 294

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 68/287 (23%), Positives = 117/287 (40%), Gaps = 17/287 (5%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            + S +  +  +  + + +       V   FL  S            +       ++  L
Sbjct: 3   MQQSKHFSLNRLDWILLAIVAG---SVSWLFLKDSGSLTYHWQWSKAISLLFTSKSDGSL 59

Query: 177 SFPTL----TMDTNAKIFVFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYIS 225
            +       T+       +F+ + G +L L       F   LS  + +      PL++I 
Sbjct: 60  PYFFDGIISTLRLTFLGMIFAVLFGTLLGLGRRSNITFIRALSNSYIQLIRNIPPLVFIF 119

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    LV +     L   H       Q    G +++    +S  + +   +AA+I 
Sbjct: 120 IFYFFIANQLVPLFGLEHLLREHSGNINPLQSVLFGPASLWENLISGVLCIGMISAAYIG 179

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VRSGL A+P+GQ EAA +LGL+     R ++ PQ  + IIPPL  Q ++L+K+SS+  
Sbjct: 180 EVVRSGLDAIPKGQHEAARSLGLSTWHRYRYIIAPQVFKVIIPPLAGQCISLVKDSSIIS 239

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +   +L  VG  I N +G   EI  +    Y  L   ++   +   
Sbjct: 240 LISIQELTFVGTEIANSSGMIFEIWTVVALCYFILCFSLSRLFSYWE 286



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 1/140 (0%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           +           G ++T  L F GMI A + GTL+G GR S    +  +   Y+++ RNI
Sbjct: 53  SKSDGSLPYFFDGIISTLRLTFLGMIFAVLFGTLLGLGRRSNITFIRALSNSYIQLIRNI 112

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV-LGI 198
           PPLV IF  Y  + + L        L      N   L        +  +  +   + +G+
Sbjct: 113 PPLVFIFIFYFFIANQLVPLFGLEHLLREHSGNINPLQSVLFGPASLWENLISGVLCIGM 172

Query: 199 VLSLFATRLSRHFHEKTGKA 218
           + + +   + R   +   K 
Sbjct: 173 ISAAYIGEVVRSGLDAIPKG 192


>gi|295836793|ref|ZP_06823726.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB74]
 gi|197697533|gb|EDY44466.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB74]
          Length = 213

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 15/223 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                       +     I + + VLG +L+     L    +         +   T  I 
Sbjct: 5   WKWDIWGDVFPILLDGFWITLLATVLGSLLAAVLGLLVAMANRGPAWLRIPVRAVTEFIR 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P LV +   + L                +         + L  + + +++E  R+G+ 
Sbjct: 65  STPLLVQLVGVFALF---------------STVDPLTIGIVVLGVHYSTYMSEAYRAGID 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EAA AL L+  +  R V+LPQA+R+++P L +  + + K + L  A+   ++V
Sbjct: 110 AVPKGQWEAARALSLSPGRTWRAVILPQAVRNVLPALGNYAIAMFKETPLLAAITVGEMV 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  ++     E+  +   I+L  S   +L M +L  ++ 
Sbjct: 170 YEAREYASEHFVYAEVFTLAGLIFLVASYPTSLLMRKLENRLG 212


>gi|289522550|ref|ZP_06439404.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504386|gb|EFD25550.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 232

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ + +   G +L +    L R F  +    L   Y+   LI G P L  + + Y    
Sbjct: 29  FELAIVAMFFGTILGVLL-ALGRSFGNRLLSWLCTAYVE--LIRGTPLLAQLFILY---- 81

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F               ++     +AA+ AE  R  + AV   Q +AA +LG+ 
Sbjct: 82  -------FALPPYGIRLSAVSVAFLGFILNSAAYQAEYTRGSIEAVGEDQFKAAYSLGMG 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA+R  IP   ++++ LLK +S+A  +G  DL++ G  I ++  Q   +
Sbjct: 135 KWQTIFYVVLPQAIRWSIPAWMNEFIYLLKCTSIAYIIGAPDLLTQGKFIASRNYQFFRV 194

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            LI   IYL + +     + ++  K+ +
Sbjct: 195 YLIVAIIYLVIVLAATWIVGKIEQKVQI 222



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 64/199 (32%), Gaps = 5/199 (2%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    ++ G   TF LA   M   TI+G L+  GR   N+L++W+C  YVE+ R  P L 
Sbjct: 16  SNFGTLMKGLAFTFELAIVAMFFGTILGVLLALGRSFGNRLLSWLCTAYVELIRGTPLLA 75

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVLGI 198
            +F LY ++           V   G  LN+             A         +S  +G 
Sbjct: 76  QLFILYFALPPYGIRLSAVSVAFLGFILNSAAYQAEYTRGSIEAVGEDQFKAAYSLGMGK 135

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
             ++F   L +         +               +    L  Q  F      QF  + 
Sbjct: 136 WQTIFYVVLPQAIRWSIPAWMNEFIYLLKCTSIAYIIGAPDLLTQGKFIASRNYQFFRVY 195

Query: 259 GSTVSPEFMSLYIALSCYT 277
                   + +  A     
Sbjct: 196 LIVAIIYLVIVLAATWIVG 214


>gi|166213863|ref|ZP_02239898.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166205037|gb|EDR49517.1| glutamine ABC transporter, permease protein [Yersinia pestis biovar
           Antiqua str. B42003004]
          Length = 218

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 95/188 (50%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+R +       + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  LARAYGGWLSSHIALVFIE--LIRGTPIVVQVMFIY---FALPMMIPLRI-------DPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  + ++  G  EA +ALGL+ R     V+ P A+R ++PP
Sbjct: 90  SAAVVTIIINSGAYIAEITRGAVPSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L   G  II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217


>gi|23464652|ref|NP_695255.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           longum NCC2705]
 gi|23325211|gb|AAN23891.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           longum NCC2705]
          Length = 366

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 114/274 (41%), Gaps = 21/274 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +   +F  +  L+++              +            +  L    +
Sbjct: 21  IRIVNWIAGI---LFAVVLVLILMRLHNPPDGENQLSWELWKPAVEREAWTDFYLPGLWM 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+       V + V G+V  +      R       + +  + +       +  L++   +
Sbjct: 78  TIKATIVAVVGAVVFGLVFGV-----GRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTETQSLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +++   IY     +++     L +++  +
Sbjct: 240 NILQTLVMAAVIYFIACWLLSRLAEWLPSRMQQR 273



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  +  V V
Sbjct: 56  ELWKPAVEREAWTDFYLPGLWMTIKATIVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|254993940|ref|ZP_05276130.1| hypothetical protein LmonocytoFSL_13880 [Listeria monocytogenes FSL
           J2-064]
          Length = 212

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG V+++           K      +L I  +++ G P L
Sbjct: 11  LDGAKTTLLVFAVTLVCSIPLGAVVAVGNIS-------KIAPLKFILNIYIWIMRGTPLL 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     +++IA     AA+ AEI R G +++  G
Sbjct: 64  LQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENG 112

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 113 QYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 172

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 173 AMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKRFS 209



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 6   ILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 66  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 94


>gi|218549771|ref|YP_002383562.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia fergusonii ATCC 35469]
 gi|218357312|emb|CAQ89947.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia fergusonii ATCC 35469]
 gi|324114774|gb|EGC08742.1| inner membrane transport system [Escherichia fergusonii B253]
          Length = 224

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITITAVVIGILWGTLLAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITITAVVIGILWGTLLAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|220928329|ref|YP_002505238.1| polar amino acid ABC transporter inner membrane subunit
           [Clostridium cellulolyticum H10]
 gi|219998657|gb|ACL75258.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulolyticum H10]
          Length = 210

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 14/214 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M  + +IF  + +  I L L  +   R  H           I   ++ G P ++ + + Y
Sbjct: 11  MVVSLQIFALTLIFAIPLGLVISFGRRAKHIIISGVTS---IYISIMRGTPLILQLLVVY 67

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F+   G      F +  IA     AA+ AEI R G+ ++P+GQ EA   
Sbjct: 68  FAPS-----YVFDAKVG-----RFTAAVIAFILNYAAYFAEIFRGGIESIPKGQYEAGEV 117

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG T  +    ++LPQ ++ ++PP++++ + L+K+++L   +G  ++  +     ++   
Sbjct: 118 LGFTKLQVFFKIILPQVIKRVLPPISNEVITLVKDTALVTVIGVEEMFRIAQNASSRV-S 176

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++  + +    Y  +++++A        K+    
Sbjct: 177 SVRPLFVAGAFYYVMNLIVAQVFTFAEKKLNYYR 210



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 33/63 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V +  +    +I A  +G ++  GR + + +++ +  +Y+ + R  P ++ +  +
Sbjct: 7   LLEGMVVSLQIFALTLIFAIPLGLVISFGRRAKHIIISGVTSIYISIMRGTPLILQLLVV 66

Query: 149 YKS 151
           Y +
Sbjct: 67  YFA 69


>gi|256831907|ref|YP_003160634.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Jonesia denitrificans DSM 20603]
 gi|256685438|gb|ACV08331.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Jonesia denitrificans DSM 20603]
          Length = 251

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 91/228 (39%), Gaps = 15/228 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L          L      M     + +    L +V+++    L+R F     +    ++
Sbjct: 9   HLSDNFTALRDALPQILDGMGITLLLTLGGASLALVVAVALGLLAR-FDNVLVRGTARVF 67

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F   G   +V +   + L F  P              P       AL     A+ AE
Sbjct: 68  IEFF--RGTSLVVQL---FWLFFVLP--------RFGVELPALAVGIAALGLNYGAYGAE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +VR  + +VP+GQ EA  AL L+  +    ++ PQA   +IP LT+  + LLK +++   
Sbjct: 115 VVRGSINSVPQGQWEATTALSLSRTQRMWRIIFPQAWALMIPSLTNLLIQLLKGTAIVSI 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  ADL  + G +   T        + + +Y  L+ ++ L MN +  +
Sbjct: 175 IAMADLTFMLGKLRQDT-DTFFAYSVGLILYFVLAYILTLGMNAMEVR 221



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 59/195 (30%), Gaps = 5/195 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L   G   A ++   +G      N LV    RV++E FR    +V +F+L
Sbjct: 24  ILDGMGITLLLTLGGASLALVVAVALGLLARFDNVLVRGTARVFIEFFRGTSLVVQLFWL 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV-FSFVLGIVLSLFATRL 207
           +  +           V    + LN        +    N+     +     + LS      
Sbjct: 84  FFVLPRFGVELPALAVGIAALGLNYGAYGAEVVRGSINSVPQGQWEATTALSLSRTQRMW 143

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ----FNFIGGSTVS 263
              F +     +P L      +     +V I     L F    L Q    F       + 
Sbjct: 144 RIIFPQAWALMIPSLTNLLIQLLKGTAIVSIIAMADLTFMLGKLRQDTDTFFAYSVGLIL 203

Query: 264 PEFMSLYIALSCYTA 278
              ++  + L     
Sbjct: 204 YFVLAYILTLGMNAM 218


>gi|158423549|ref|YP_001524841.1| glutamate/aspartate transport system permease protein 1
           [Azorhizobium caulinodans ORS 571]
 gi|158330438|dbj|BAF87923.1| glutamate/aspartate transport system permease protein 1
           [Azorhizobium caulinodans ORS 571]
          Length = 230

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 11/213 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                    F LGI+L++      R                T  +  + ++ L+ + +  
Sbjct: 28  LTVLAGAMGFGLGILLAVLRLSPLRLLSVPA----------TLYVNLVRSVPLVLIIFWF 77

Query: 245 HFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +F  P +G +       +    F S  ++ + + AA+  EI+R G+ ++ RGQ+ A +AL
Sbjct: 78  YFLVPYIGAWLVGSSRPIQVGAFRSALVSFTLFEAAYFCEIIRGGIQSIRRGQISAGLAL 137

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT R+    V+LPQA+R++ P L ++ + L +++SL   VG  D +     +  + G+ 
Sbjct: 138 GLTRRQTFLKVVLPQAIRNMTPSLLTRLIVLFQDTSLVYVVGLTDFLGAASKVGARDGRL 197

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            E  +    +YL +    +  + RL  +  +  
Sbjct: 198 TEFYVFVAVVYLVICFAASRLVKRLELRWKVAR 230


>gi|156742154|ref|YP_001432283.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
 gi|156233482|gb|ABU58265.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
          Length = 224

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   S +LG+++ L    + R +     + L   YI+ F   G P L+ +   Y  
Sbjct: 21  VTLQIAAISLILGMIVGLPVG-IGRVYGPVWLQRLLGAYITLF--QGTPLLIQLFTVYY- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  + ++ L   +AA+ AE +RS L +V  GQM AA A+G
Sbjct: 77  ----------GLPDVGITLGRLQAAFLTLGLNSAAYQAEYLRSALQSVSEGQMVAARAIG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A   V+LPQA+R  +P  +++ + +LK +S+   +   DL+     + ++    I
Sbjct: 127 MSKWQAIWSVVLPQALRLALPAWSNEAIAMLKYTSVVFLIAVPDLMGQAKILASRYFAPI 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +I LI    Y++L  +  L +  +  ++ +
Sbjct: 187 QIYLIVAVFYIALVGIAYLILTMIERRVRI 216



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 8/196 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +A   +I   I+G  VG GR+     +  +   Y+ +F+  P L+ +F +
Sbjct: 15  LLQGTVVTLQIAAISLILGMIVGLPVGIGRVYGPVWLQRLLGAYITLFQGTPLLIQLFTV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVLSLFAT 205
           Y  +  V             + LN+       L     +      V +  +G+  S +  
Sbjct: 75  YYGLPDVGITLGRLQAAFLTLGLNSAAYQAEYLRSALQSVSEGQMVAARAIGM--SKWQA 132

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             S    +    ALP        +    ++V +     L     +L    F   + +   
Sbjct: 133 IWSVVLPQALRLALPAWSNEAIAMLKYTSVVFLIAVPDLMGQAKILASRYF---APIQIY 189

Query: 266 FMSLYIALSCYTAAFI 281
            +     ++    A++
Sbjct: 190 LIVAVFYIALVGIAYL 205


>gi|323350546|ref|ZP_08086208.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123228|gb|EFX94913.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|324989768|gb|EGC21711.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
 gi|325688946|gb|EGD30954.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 228

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +L    L + +  +  +   ++Y++         L+L      
Sbjct: 18  PVTLIIMVVAILLSFIPALLL-ALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +                   +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     + + Q 
Sbjct: 137 GLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKDITALAKIEASHSYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   IYL +  +I      L  + AL
Sbjct: 197 SESYLVIFVIYLIICGLIQWIFRGLEKRYAL 227



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + I   L+  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGIPVTLIIMVVAILLSFIPALLLALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
               S+L     S+     +F  N       + 
Sbjct: 74  SLFPSLLNQIFKSLGSQVDVFKFNPLYYAFIIY 106


>gi|24379609|ref|NP_721564.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|290580391|ref|YP_003484783.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24377558|gb|AAN58870.1|AE014954_9 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|254997290|dbj|BAH87891.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 213

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + +FS  LG +L+       R           LL +  +++ G P L
Sbjct: 12  LDGALITLQVFFIVILFSIPLGAILAFLMQVPFRPLRW-------LLNLYVWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFIYYV-----------LPSAGITFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L+  +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLSQIQTVRYIILPQVVKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             N+    +  + I   IYL L  ++ +    +  K +
Sbjct: 174 AANRDA-TLAPMFIAGGIYLILIGVVTILSKYVEKKFS 210



 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  ++ +  +G ++        + + W+  +YV + R  P L+ + F+
Sbjct: 11  LLDGALITLQVFFIVILFSIPLGAILAFLMQVPFRPLRWLLNLYVWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + S     D          LN              A 
Sbjct: 71  YYVLPSAGITFDRMPAAILAFTLNYAAYFAEIFRGGIEAI 110


>gi|319794877|ref|YP_004156517.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315597340|gb|ADU38406.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 217

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 5/159 (3%)

Query: 238 IALKYQLHFDKPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           + L  QL    P+L Q     F           + +  +AL+ YT+AF+ EI R  + ++
Sbjct: 53  VGLYVQLFQGTPLLMQLFLAYFGIALFGIDVSAWTAASVALTLYTSAFLTEIWRGCVASI 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA+ +L L+  +  R V+LPQA++  I P     + ++K ++LA  +GF +L   
Sbjct: 113 PKGQWEASGSLALSFGEQMRHVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVELTKA 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  I N T Q   +      +Y  L   ++L+   L  K
Sbjct: 173 GSMISNATFQPFVVFSCVALLYFVLCFPVSLYAKNLERK 211


>gi|255026867|ref|ZP_05298853.1| hypothetical protein LmonocytFSL_12011 [Listeria monocytogenes FSL
           J2-003]
          Length = 213

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG V+++           K      +L I  +++ G P L
Sbjct: 12  LDGAKTTLLVFAVTLVCSIPLGAVVAIGNIS-------KIAPLKFILNIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     +++IA     AA+ AEI R G +++  G
Sbjct: 65  LQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 114 QYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 174 AMSRDVTLIPLVLVAA-IYLALTAILTVLFKQLEKRFS 210



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFAVTLVCSIPLGAVVAIGNISKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 95


>gi|153829863|ref|ZP_01982530.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39]
 gi|148874664|gb|EDL72799.1| arginine ABC transporter, permease protein [Vibrio cholerae 623-39]
          Length = 229

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F   G       F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFFITGEFIEISPFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSIQ 219


>gi|108760413|ref|YP_633646.1| His/Glu/Gln/Arg/opine amino acid ABC transporter
           permease/periplasmic amino acid-binding protein
           [Myxococcus xanthus DK 1622]
 gi|108464293|gb|ABF89478.1| amino acid ABC transporter, permease protein/periplasmic amino
           acid-binding protein, His/Glu/Gln/Arg/opine family
           [Myxococcus xanthus DK 1622]
          Length = 481

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 15/225 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L            + V + VL I L +    L+R +       L   Y+  F   
Sbjct: 272 MGWGQLVLFLQAAGVTLLVSVGAMVLAIPLGVGL-ALTRLYGPGWAARLSTAYVELF--R 328

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + Y              + G        +  + L    AA+ +E+ R+G++
Sbjct: 329 GTPVLLQLYVLYY------------GLAGVLRLDPISAAILGLGLNYAAYESEVYRAGVL 376

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ+EAA+ALG+  R A R V+LPQA R  +P + + ++ LLK+SSL   +   +L 
Sbjct: 377 AVPRGQLEAAMALGMPLRLALRRVILPQAFRVALPGVANDFIALLKDSSLVSVISVVELT 436

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                        +    +   +YL++S  ++     L A++   
Sbjct: 437 KRMTITAVDVRSWLIPGALCALMYLAMSYPLSRLARHLEARLERG 481



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 2/122 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L     T  ++   M+ A  +G  +   RL      A +   YVE+FR  P L+ ++ L
Sbjct: 280 FLQAAGVTLLVSVGAMVLAIPLGVGLALTRLYGPGWAARLSTAYVELFRGTPVLLQLYVL 339

Query: 149 YKSVLSVLP-IPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           Y  +  VL   P  + +L  G+ +       +    +         +  LG+ L L   R
Sbjct: 340 YYGLAGVLRLDPISAAILGLGLNYAAYESEVYRAGVLAVPRGQLEAAMALGMPLRLALRR 399

Query: 207 LS 208
           + 
Sbjct: 400 VI 401


>gi|15901311|ref|NP_345915.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15903358|ref|NP_358908.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|111658102|ref|ZP_01408801.1| hypothetical protein SpneT_02000710 [Streptococcus pneumoniae
           TIGR4]
 gi|116515947|ref|YP_816756.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|148984803|ref|ZP_01818056.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148990269|ref|ZP_01821480.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|148992655|ref|ZP_01822323.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|148997480|ref|ZP_01825085.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149002856|ref|ZP_01827782.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|149007268|ref|ZP_01830926.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|149011689|ref|ZP_01832885.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|149019406|ref|ZP_01834768.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483927|ref|ZP_02708879.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC1873-00]
 gi|168486158|ref|ZP_02710666.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC1087-00]
 gi|168489622|ref|ZP_02713821.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae SP195]
 gi|168492530|ref|ZP_02716673.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC0288-04]
 gi|168493362|ref|ZP_02717505.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC3059-06]
 gi|168575918|ref|ZP_02721833.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae MLV-016]
 gi|169833994|ref|YP_001694877.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae Hungary19A-6]
 gi|182684418|ref|YP_001836165.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|221232186|ref|YP_002511339.1| ABC transporter permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225854902|ref|YP_002736414.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae JJA]
 gi|225857087|ref|YP_002738598.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae P1031]
 gi|225859222|ref|YP_002740732.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae 70585]
 gi|225860770|ref|YP_002742279.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae Taiwan19F-14]
 gi|237649578|ref|ZP_04523830.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CCRI 1974]
 gi|237821542|ref|ZP_04597387.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CCRI 1974M2]
 gi|289168215|ref|YP_003446484.1| ABC transporter membrane-spanning permease-aspartate/glutamate
           transport [Streptococcus mitis B6]
 gi|298230956|ref|ZP_06964637.1| ABC transporter membrane-spanning permease-aspartate/glutamate
           transport [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254980|ref|ZP_06978566.1| ABC transporter membrane-spanning permease-aspartate/glutamate
           transport [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502585|ref|YP_003724525.1| amino acid ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|303254998|ref|ZP_07341075.1| ABC transporter permease protein [Streptococcus pneumoniae BS455]
 gi|303261737|ref|ZP_07347684.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264410|ref|ZP_07350330.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303266758|ref|ZP_07352640.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303269183|ref|ZP_07354961.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|307068111|ref|YP_003877077.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|307126969|ref|YP_003879000.1| aspartate/glutamate ABC transporter membrane-spanning permease
           [Streptococcus pneumoniae 670-6B]
 gi|307706929|ref|ZP_07643728.1| L-cystine transport system permease protein tcyB [Streptococcus
           mitis SK321]
 gi|14972950|gb|AAK75555.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|15458959|gb|AAL00119.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae R6]
 gi|116076523|gb|ABJ54243.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|147756535|gb|EDK63576.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147759150|gb|EDK66144.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147761072|gb|EDK68040.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147764120|gb|EDK71052.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147922825|gb|EDK73941.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147924408|gb|EDK75498.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147928672|gb|EDK79686.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|147931276|gb|EDK82255.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168996496|gb|ACA37108.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae Hungary19A-6]
 gi|172042784|gb|EDT50830.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC1873-00]
 gi|182629752|gb|ACB90700.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|183570798|gb|EDT91326.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC1087-00]
 gi|183571922|gb|EDT92450.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae SP195]
 gi|183573271|gb|EDT93799.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC0288-04]
 gi|183576607|gb|EDT97135.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae CDC3059-06]
 gi|183578205|gb|EDT98733.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae MLV-016]
 gi|220674647|emb|CAR69216.1| ABC transporter permease protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225720038|gb|ACO15892.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae 70585]
 gi|225724222|gb|ACO20075.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae JJA]
 gi|225726278|gb|ACO22130.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae P1031]
 gi|225727706|gb|ACO23557.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae Taiwan19F-14]
 gi|288907782|emb|CBJ22622.1| ABC transporter membrane-spanning permease-aspartate/glutamate
           transport [Streptococcus mitis B6]
 gi|298238180|gb|ADI69311.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
 gi|301794485|emb|CBW36924.1| ABC transporter permease protein [Streptococcus pneumoniae INV104]
 gi|301800311|emb|CBW32937.1| ABC transporter permease protein [Streptococcus pneumoniae OXC141]
 gi|301802189|emb|CBW34935.1| ABC transporter permease protein [Streptococcus pneumoniae INV200]
 gi|302598005|gb|EFL65074.1| ABC transporter permease protein [Streptococcus pneumoniae BS455]
 gi|302637317|gb|EFL67805.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302641307|gb|EFL71676.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302643747|gb|EFL74012.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646222|gb|EFL76449.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|306409648|gb|ADM85075.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|306484031|gb|ADM90900.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus pneumoniae 670-6B]
 gi|307617643|gb|EFN96811.1| L-cystine transport system permease protein tcyB [Streptococcus
           mitis SK321]
 gi|332072255|gb|EGI82738.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332073798|gb|EGI84276.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
 gi|332074213|gb|EGI84690.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 266

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 5/231 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +     G+      + T   + +   + G+VL+L    + +    K    L   ++S 
Sbjct: 25  FSLRSVFDGIPRIVQQLPTTIMLTIGGALFGLVLALL-FAIVKINRVKILYPLQAFFVSF 83

Query: 227 FLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEI 284
             + G P LV + L  Y +      L Q    G      P      +A +   AA+ +E 
Sbjct: 84  --LKGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAAFAIVAFAFNEAAYASET 141

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + 
Sbjct: 142 IRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSA 201

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 202 GVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|304405413|ref|ZP_07387072.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
 gi|304345452|gb|EFM11287.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus curdlanolyticus YK9]
          Length = 236

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 105/224 (46%), Gaps = 5/224 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   I V S +LG ++    T L R +       +   Y+    I G P L
Sbjct: 12  FWKLLSALPTTLLITVVSVLLGFLIG-AVTALLRVYRVPVLHPIASFYVKF--IRGTPML 68

Query: 236 VLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           + + L Y         +   F +   S   P  + + IA S    A+++EIVRSG++AV 
Sbjct: 69  MHLFLIYFGLPKLIDWLSASFGWSFTSVQIPILVFVLIAFSITAGAYMSEIVRSGMLAVD 128

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA+++G+T  +A R ++ PQA+   +P L++  + +L  S++A  V   ++    
Sbjct: 129 RGQLEAALSVGMTRTQAIRRIVFPQALAVSLPNLSNALIGMLHGSTVAFTVPVIEVFGQA 188

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +     +  E  +    IY +L+++I    + L  +I+L  +
Sbjct: 189 NIVAMTNWKYFEAFIAAAIIYWALTLLIEKSTSVLEKRISLYNR 232



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 31/82 (37%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L     T  +    ++   +IG +    R+    ++  I   YV+  R  P L+ +
Sbjct: 12  FWKLLSALPTTLLITVVSVLLGFLIGAVTALLRVYRVPVLHPIASFYVKFIRGTPMLMHL 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPF 167
           F +Y  +  ++     S    F
Sbjct: 72  FLIYFGLPKLIDWLSASFGWSF 93


>gi|325275176|ref|ZP_08141143.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324099663|gb|EGB97542.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 223

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+       V   VLG +L+L     S+      G      Y++ F      ++
Sbjct: 16  WEGMLMTLQLMVMGVVGGIVLGTILALMRLSSSKLLSRLAG-----AYVNYFR-----SI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 66  PLLLVITWFYLAVPFVLRW-ITGEDTPVGAFTSCVVAFMMFEAAYFCEIVRAGVQSISKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+T+ +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 125 QMGAAQALGMTYSQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARS 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G++ E ++    +Y  +S   +  + RL  +I +
Sbjct: 185 NGDIIGRSHEFLIFAGVVYFLISFSASWLVKRLQKRITV 223



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++       A+  G + T  L   G++   ++GT++   RLS++KL++ +   YV  F
Sbjct: 3   MDFSEIIPALPALWEGMLMTLQLMVMGVVGGIVLGTILALMRLSSSKLLSRLAGAYVNYF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R+IP L+VI + Y +V  VL                               
Sbjct: 63  RSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113


>gi|319778836|ref|YP_004129749.1| Histidine ABC transporter, permease protein HisM [Taylorella
           equigenitalis MCE9]
 gi|317108860|gb|ADU91606.1| Histidine ABC transporter, permease protein HisM [Taylorella
           equigenitalis MCE9]
          Length = 243

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 100/247 (40%), Gaps = 20/247 (8%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
                  +   +      ++ +    S   +T+ T +     +F+L + LSL     +  
Sbjct: 1   MSFFNDVLTVANEYWEPLIWWDGTQYSGLAITLWTLSLSIFLAFILALPLSLMRVSKNPF 60

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF------DKPVLGQFNFIGGSTVSP 264
                       ++ T++  G P  + + L Y          + PVL  F F G      
Sbjct: 61  IRGPI-------WVFTYVFRGTPLYIQLLLIYSGFISLEFVKNTPVLHNFFFSG------ 107

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F  + +A +  T A+  EI    + + P G++EA  A G++  +  + ++LP A+R  +
Sbjct: 108 -FNCVILAFTLNTLAYTIEIFAGYIKSTPSGEIEAGRAYGMSKPQIYKRIILPSALRRAL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + +L ++++A      D++ V    +N T   +    +   IY+ +S +I   
Sbjct: 167 PAYSNEVILMLHSTTIAFTATVPDILKVARDAMNDTYLTMASYTVAAVIYMVMSFVIVWI 226

Query: 385 MNRLNAK 391
              +  +
Sbjct: 227 FRLIERR 233



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T W     +  A I+   +   R+S N  +     V+  VFR  P  + +  +Y  
Sbjct: 28  GLAITLWTLSLSIFLAFILALPLSLMRVSKNPFIRGPIWVFTYVFRGTPLYIQLLLIYSG 87

Query: 152 VLSVLPIPDHSIVLPFGM 169
            +S+  + +  ++  F  
Sbjct: 88  FISLEFVKNTPVLHNFFF 105


>gi|289768689|ref|ZP_06528067.1| glutamate permease [Streptomyces lividans TK24]
 gi|289698888|gb|EFD66317.1| glutamate permease [Streptomyces lividans TK24]
          Length = 305

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 17/242 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                +        +         T+   A   V +  LG VL +   RLS H   +   
Sbjct: 57  WAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIA--RLSDHAWVRIPV 114

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+ + +        +P LVL+     L  +        +   S+      ++   L  Y 
Sbjct: 115 AIVVEF-----FRSIPVLVLMIFGLALFAE--------YTDVSSDDRPLYAVVTGLVLYN 161

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A+ +AEIVR+G++A+P+GQ E A+A+GL   ++ RL+LLPQA+ +++P + SQ + +LK+
Sbjct: 162 ASVLAEIVRAGILALPKGQAEGAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKD 221

Query: 338 SSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++L    + F +L++   T+    G   I    +   IY++L+  +  F + L  ++   
Sbjct: 222 TALGGAVLTFPELLASANTMSGYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRA 281

Query: 396 EK 397
           +K
Sbjct: 282 KK 283



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 44/91 (48%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E+   +  +  + +TSD  ++T I  G  NT   A   M+ A  +G ++G  RLS + 
Sbjct: 49  LDEKGQLDWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 108

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154
            V     + VE FR+IP LV++ F       
Sbjct: 109 WVRIPVAIVVEFFRSIPVLVLMIFGLALFAE 139


>gi|23501836|ref|NP_697963.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|161618909|ref|YP_001592796.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|163843221|ref|YP_001627625.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|254701712|ref|ZP_05163540.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 5 str. 513]
 gi|254704254|ref|ZP_05166082.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|254719050|ref|ZP_05180861.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           sp. 83/13]
 gi|256061052|ref|ZP_05451208.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           neotomae 5K33]
 gi|256369378|ref|YP_003106886.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260566497|ref|ZP_05836967.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261325053|ref|ZP_05964250.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261752263|ref|ZP_05995972.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261754922|ref|ZP_05998631.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|265984042|ref|ZP_06096777.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|297248902|ref|ZP_06932616.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|306838981|ref|ZP_07471803.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|306840464|ref|ZP_07473223.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306843854|ref|ZP_07476449.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|23347772|gb|AAN29878.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|161335720|gb|ABX62025.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|163673944|gb|ABY38055.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
 gi|255999538|gb|ACU47937.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|260156015|gb|EEW91095.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261301033|gb|EEY04530.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261742016|gb|EEY29942.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261744675|gb|EEY32601.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|264662634|gb|EEZ32895.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|297174266|gb|EFH33617.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|306275609|gb|EFM57333.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306289479|gb|EFM60697.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306405948|gb|EFM62205.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 240

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 2/206 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G++L  F   L +   E + +    +Y + F       L L  + +  
Sbjct: 25  VTVSLALATLPVGLILG-FLVALGKQSSEPSMRLAANIYTTIFRGL-PELLTLFLVYFGA 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 L     I  +     F++  +AL    +++ +E+  S   A+P GQ E   A+G
Sbjct: 83  SLGLQRLLHLFGIDANIEINAFVAGMVALGFVFSSYSSEVFLSAFRAIPHGQYEGGYAVG 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+ R+  R+V+ PQ +R  +P L + +L LLK++SL   +  +D++         T +  
Sbjct: 143 LSRRQTMRMVIFPQLIRIALPGLANLWLVLLKDTSLVSVITLSDILRQTSIAARVTKEPF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
               I   +YL+L+I+ + F+NR+  
Sbjct: 203 LFFGIACLLYLALAIISSYFINRIAR 228



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 8/158 (5%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +  +I  G + T  LA + +    I+G LV  G+ S+   +     +Y  +FR +P L
Sbjct: 13  DGWGISIAKGLLVTVSLALATLPVGLILGFLVALGKQSSEPSMRLAANIYTTIFRGLPEL 72

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +F +Y      L    H       +F  +  +          A  FVFS     V  L
Sbjct: 73  LTLFLVYFGASLGLQRLLH-------LFGIDANIEINAFVAGMVALGFVFSSYSSEVF-L 124

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            A R   H   + G A+ L    T  +   P L+ IAL
Sbjct: 125 SAFRAIPHGQYEGGYAVGLSRRQTMRMVIFPQLIRIAL 162


>gi|319945662|ref|ZP_08019914.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319748261|gb|EFW00503.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 230

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 114/236 (48%), Gaps = 8/236 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++ + +      L      +     + V + +LG    L  T  ++   +K G  L   Y
Sbjct: 1   MVSYDISKVWTFLPTLVQALPATLALMVLTTLLGSAFGLVLT-WAQVSEDKVGAGLAKGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T           I L + + +  P    +          +F+ + IA+    AA I+E
Sbjct: 60  VFTLRCTPP-----IVLLFLVFYGLPQFLNWWLGIDIDHWSKFVFVLIAMFLLFAAMISE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + ++  +A+P+GQMEA +++GLT  +    ++LPQA R  +P +T+  LNL+++++LA  
Sbjct: 115 VFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYT 174

Query: 344 VGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GF D++  G  +I++     ++E       IY +++++I+     L  ++++ E+
Sbjct: 175 IGFIDIMGAGNNLISRNLGNYSLETYTAVAVIYWAIALVISFSAQLLEKRLSVTER 230


>gi|290476188|ref|YP_003469088.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus
           bovienii SS-2004]
 gi|289175521|emb|CBJ82324.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Xenorhabdus bovienii SS-2004]
          Length = 246

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + V ++V+ + +      L R    K    L
Sbjct: 6   NWGIFLQAAPFGNTTYLGWLISGFQVTVALSVCAWVIALAVGSLFGIL-RTVPNKFLATL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              Y+  F    +P +V   + Y +   F    L  +  +        F+S  I L  +T
Sbjct: 65  GACYVELF--RNIPLIVQFFIWYLVVPEFLPKNLSNWFKMELDPNIQFFISSVICLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA I E VR+ + ++PRGQ  A  A+GLT  +  R VLLP A R IIPP+TS+ LNL+KN
Sbjct: 123 AARICEQVRAAIQSLPRGQKAAGQAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++++I L M  L  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINLVIMLAMTLLEKKVRL 239



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 39/83 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++ GF  T  L+    + A  +G+L G  R   NK +A +   YVE+FRNIP +V
Sbjct: 20  TYLGWLISGFQVTVALSVCAWVIALAVGSLFGILRTVPNKFLATLGACYVELFRNIPLIV 79

Query: 144 VIFFLYKSVLSVLPIPDHSIVLP 166
             F  Y  V   LP    +    
Sbjct: 80  QFFIWYLVVPEFLPKNLSNWFKM 102


>gi|116670530|ref|YP_831463.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116610639|gb|ABK03363.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter sp. FB24]
          Length = 262

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 22/217 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +    LG+V+++     S+              I T L  GLP ++ I L  Q   
Sbjct: 37  VAATIIGVALGMVVAVMGISPSKWLRVPA-------RIYTDLFRGLPAILTILLIGQ--- 86

Query: 247 DKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                  F  +  S   P  +    IALS   +A+I EI R+G+ +V RGQ EA  ALG+
Sbjct: 87  ------GFARLSQSIFGPSPYPLGIIALSLIASAYIGEIFRAGIQSVDRGQGEACRALGM 140

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361
           ++ K+  LV++PQ +R ++P L +Q++ ++K+SSL   +G      +L  VG      +G
Sbjct: 141 SYAKSMALVVVPQGIRRVLPALVNQFIAIVKDSSLVYFLGLLVTERELFRVGQDAAVLSG 200

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  +++    YL +++ +   +N  +++     ++
Sbjct: 201 N-LSPLVMAGIFYLIITVPLTHLVNYFDSRFRTGRRR 236



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 37/82 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + VG +NT  ++ +  I    +G +V    +S +K +    R+Y ++FR +P ++ I  +
Sbjct: 25  LGVGLLNTLIISVAATIIGVALGMVVAVMGISPSKWLRVPARIYTDLFRGLPAILTILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            +    +          P G+ 
Sbjct: 85  GQGFARLSQSIFGPSPYPLGII 106


>gi|16803780|ref|NP_465265.1| hypothetical protein lmo1740 [Listeria monocytogenes EGD-e]
 gi|47095666|ref|ZP_00233273.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224499540|ref|ZP_03667889.1| hypothetical protein LmonF1_07517 [Listeria monocytogenes Finland
           1988]
 gi|224503335|ref|ZP_03671642.1| hypothetical protein LmonFR_12615 [Listeria monocytogenes FSL
           R2-561]
 gi|254829262|ref|ZP_05233949.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|254900755|ref|ZP_05260679.1| hypothetical protein LmonJ_13104 [Listeria monocytogenes J0161]
 gi|254938146|ref|ZP_05269843.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|16411194|emb|CAC99818.1| lmo1740 [Listeria monocytogenes EGD-e]
 gi|47015951|gb|EAL06877.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258601674|gb|EEW14999.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258610760|gb|EEW23368.1| amino acid ABC transporter [Listeria monocytogenes F6900]
          Length = 213

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG V+++           K      +L I  +++ G P L
Sbjct: 12  LDGAKTTLLVFAVTLVCSIPLGAVVAVGNIS-------KIAPLKFILNIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     +++IA     AA+ AEI R G +++  G
Sbjct: 65  LQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 114 QYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 174 AMSRDVTLIPLVLVAA-IYLALTAILTVLFKQLEKRFS 210



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 95


>gi|238751271|ref|ZP_04612765.1| Histidine transport system permease protein hisQ [Yersinia rohdei
           ATCC 43380]
 gi|238710545|gb|EEQ02769.1| Histidine transport system permease protein hisQ [Yersinia rohdei
           ATCC 43380]
          Length = 228

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S ++G++ +      +R           L    T LI G+P LVL+ L +  
Sbjct: 19  LALCSVLLSVIIGLIGAGGKLSSNRLLSG-------LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AVP GQ+EAA A G
Sbjct: 72  LQITLNSITESLGFSQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPMGQIEAAKAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGVVYLIFTTISNGVLLWLERRYSHGVKR 225


>gi|186473942|ref|YP_001861284.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196274|gb|ACC74238.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 543

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 96/228 (42%), Gaps = 14/228 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +FL+  GL +    +     +       G+V+ L    L+     + G    L    T +
Sbjct: 3   LFLHYLGLPYLLRGIGFTIAVTALGLAGGVVVGLV---LAAMQLSRVGPLAALARGYTVI 59

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P ++ +   Y      P +G      G+                   FIAEI+R+G
Sbjct: 60  FRGTPLILQLVFAYD---ALPHIGLKLSATGAAALALAA--------NEGPFIAEILRAG 108

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++ V RGQ+ A  ALG+T     R V+ PQA+R+I+P L ++ ++ LKNSSLA  +   +
Sbjct: 109 VLGVERGQLLAGQALGMTPSVLMRRVIAPQAIRAIVPALGNESVSALKNSSLASVIAVDE 168

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L      + + T     I      +YL L+  +A+      A + L  
Sbjct: 169 LTLRSTQLASSTFDFFSIFFASGLMYLILTGAVAVIQLIAEAALDLDR 216



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 33/68 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  +   G+    ++G ++ A +LS    +A + R Y  +FR  P ++ + F
Sbjct: 12  YLLRGIGFTIAVTALGLAGGVVVGLVLAAMQLSRVGPLAALARGYTVIFRGTPLILQLVF 71

Query: 148 LYKSVLSV 155
            Y ++  +
Sbjct: 72  AYDALPHI 79


>gi|308185788|ref|YP_003929919.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056298|gb|ADO08470.1| putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 219

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 14/227 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               F +   L    L       + + +F+ G +++L      R    K    L   Y +
Sbjct: 1   MMTTFTDWDILRNLLLAARWTLLLSLVAFIGGTLVTLPLL-FMRLLQRKWLTRLIRGYTA 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P L+ + L +           F           + +  +AL+ YT+AF+ +I 
Sbjct: 60  LF--QGTPLLMQLFLAF-----------FGVGLFGIDVAPWTAASLALTFYTSAFLVDIW 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
              + A+P+GQ EA+  LGLT  +    V+ PQA+R  I P     + ++K ++LA  +G
Sbjct: 107 YGSIRALPKGQWEASRCLGLTFGQTLWRVVAPQAIRIGIAPTVGFAVQVIKGTALASIIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           F +L   G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 167 FIELTKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSRYSQYLEKKF 213



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 31/107 (28%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D      +L+    T  L+    I  T++   +   RL   K +  + R Y  +F+  P 
Sbjct: 7   DWDILRNLLLAARWTLLLSLVAFIGGTLVTLPLLFMRLLQRKWLTRLIRGYTALFQGTPL 66

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           L+ +F  +  V                +                 A 
Sbjct: 67  LMQLFLAFFGVGLFGIDVAPWTAASLALTFYTSAFLVDIWYGSIRAL 113


>gi|291457926|ref|ZP_06597316.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291419470|gb|EFE93189.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 215

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 90/180 (50%), Gaps = 8/180 (4%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            + G    L+ I   ++ G P ++ + + Y   +       + F    +     +++ I 
Sbjct: 39  SRNGPLSALIRIYISIMRGTPLMLQLFVVYYGPY-------YLFRIRLSPGYRNIAVCIG 91

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
                AA+ AEI RSG+ ++P+GQ EAA  LG +  ++   ++LPQ ++ I+P +T++ +
Sbjct: 92  FVINYAAYFAEIYRSGIQSIPKGQYEAAEILGYSRAQSFLRIILPQVIKRILPAVTNEVI 151

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+K++SLA ++   ++ +    + +    ++  ++     Y   + ++A  M RL  ++
Sbjct: 152 TLVKDTSLAFSISVMEMFTAAKALSSA-QSSMTPLIAAGIFYYIFNFIVAFLMERLEKRL 210


>gi|262278837|ref|ZP_06056622.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259188|gb|EEY77921.1| glutamate/aspartate transporter [Acinetobacter calcoaceticus
           RUH2202]
          Length = 225

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 11/234 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  N   ++           + V + + GI++      + R             Y+
Sbjct: 1   MDFSLLQNPDVIAALKEGFIFTLTVTVLAMLGGILIGTPL-AMMRLSSNAIASNFAKFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       + LI + +  +F  P + +F      T      S  +  + + AAF +EI
Sbjct: 60  DLFR-----GIPLIQVIFIFYFLLPKIFEF---QSDTYWGPLFSSVVTFAIFEAAFFSEI 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSG+ ++ RGQ+ A  ALG T+ ++ R V+LPQA R+++P L +Q + L ++ SL   +
Sbjct: 112 VRSGIQSISRGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVI 171

Query: 345 GFADLVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D +    T+ N  G        LI   +Y   S +++  + RL  KIA+  
Sbjct: 172 SAPDFLGRADTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQQKIAIIR 225



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 6/158 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  +    M+   +IGT +   RLS+N + +   + YV++FR IP + VIF 
Sbjct: 14  ALKEGFIFTLTVTVLAMLGGILIGTPLAMMRLSSNAIASNFAKFYVDLFRGIPLIQVIFI 73

Query: 148 LYKSVLSVLPIPDHSIV-LPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLF 203
            Y  +  +      +     F   +          +    + I   S      G  L   
Sbjct: 74  FYFLLPKIFEFQSDTYWGPLFSSVVTFAIFEAAFFSEIVRSGIQSISRGQVNAGYALGFT 133

Query: 204 ATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             +  R+    +     LP+L   T ++F   +LV + 
Sbjct: 134 YGQSMRYVVLPQAFRNMLPVLLTQTIILFQDISLVYVI 171


>gi|238797419|ref|ZP_04640918.1| Histidine transport system permease protein hisQ [Yersinia
           mollaretii ATCC 43969]
 gi|238718690|gb|EEQ10507.1| Histidine transport system permease protein hisQ [Yersinia
           mollaretii ATCC 43969]
          Length = 228

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +L +++ L      +    +      L    T LI G+P LVL+ L +  
Sbjct: 15  VTLELALCSVLLSVIIGLMG-AGGKLSSNRLLSG--LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AVP GQ+EAA A G
Sbjct: 72  LQIALNSITESIGFEQINIDPLSAGIITLGFIYGAYFTETFRGAYMAVPAGQIEAARAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTSSQIFRRILFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGAVYLIFTTISNGVLLWLERRYSHGVKR 225


>gi|170023780|ref|YP_001720285.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|169750314|gb|ACA67832.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
          Length = 228

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ +FS +L +V+ L      +    +      L    T LI G+P LVL+ L +  
Sbjct: 15  VTLELALFSVLLSVVIGLMG-AGGKLSSNRLVSG--LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AV +GQ+EAA A G
Sbjct: 72  LQITLNSITESLGFAQIDIDPLSAGVITLGFIYGAYFTETFRGAYMAVSKGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   IYL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGAIYLFFTTLSNGVLWWLERRYSHGVKR 225


>gi|311106716|ref|YP_003979569.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 10 [Achromobacter
           xylosoxidans A8]
 gi|310761405|gb|ADP16854.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 10
           [Achromobacter xylosoxidans A8]
          Length = 229

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 8/233 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L            + +   +    L+L           +      L   
Sbjct: 1   MLDLLSQYWPTLLVGQYPNGPLGGLALTLILAACGLALSLPLALLIALARVSPYGWLRTA 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  L+  +  + L+ L +  +F  P L          V   F +L  AL  Y +A+++E+
Sbjct: 61  SKALVNVVRGMPLLMLIFWAYFVVPKLTG-------QVISGFWTLIFALVVYESAYLSEV 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ AVPRGQ+EA+ +LG+ +    R V+LPQA+ +++P +TSQ+++ +K +SL   +
Sbjct: 114 IRSGIEAVPRGQIEASRSLGVGYWTTMRRVVLPQALFNVLPSMTSQFVSTIKETSLGYVI 173

Query: 345 GFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L      + N    + +++  I   IY  +   ++  ++ L+ +I    
Sbjct: 174 SVNELTFAANQVNNLVLTKPLQVFGILAIIYFLVCFSLSRGLSWLDLRIRRSR 226


>gi|302558022|ref|ZP_07310364.1| glutamate permease [Streptomyces griseoflavus Tu4000]
 gi|302475640|gb|EFL38733.1| glutamate permease [Streptomyces griseoflavus Tu4000]
          Length = 300

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 109/257 (42%), Gaps = 16/257 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV+ +                             L     T+   A   V +  LG +L 
Sbjct: 30  LVLWWVYRTMDDKGQLDWALWKPFTESEAWTTYLLPGLVDTLKAAALSMVIALPLGAILG 89

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +     +R    K  +    + +  F    +  L+L A ++                 ++
Sbjct: 90  I-----ARMSDHKWVRVPASVVVEFFRAIPVLLLMLFANEFFA----------RSTDVTS 134

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                 ++   L  Y A+ +AE+VR+G++++P+GQ EAA A+GL   +    +LLPQA+ 
Sbjct: 135 ADRPLYAVVTGLVLYNASVLAEVVRAGILSLPKGQGEAAQAIGLRKSQIMGNILLPQAVT 194

Query: 322 SIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            ++P + SQ + ++K+++L    +GF +L++  GT+       +   ++   I++ L+ +
Sbjct: 195 VMLPAIVSQLVVIVKDTALGGVMLGFTELLNSRGTLAANYANVVPSFIVVAVIFIVLNFL 254

Query: 381 IALFMNRLNAKIALKEK 397
           +  F + L  ++   ++
Sbjct: 255 LTSFASWLEGRLRRSKR 271



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 22/145 (15%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N+ + ++    L ++  W                    + ++   
Sbjct: 2   TSVLYDAPGPRAKRRNVILSVVFIAALALVLWWVYRT----------------MDDKGQL 45

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +      P+T   ++ T +L G V+T   A   M+ A  +G ++G  R+S +K V     
Sbjct: 46  DWAL-WKPFTESEAWTTYLLPGLVDTLKAAALSMVIALPLGAILGIARMSDHKWVRVPAS 104

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSV 155
           V VE FR IP L+++ F  +     
Sbjct: 105 VVVEFFRAIPVLLLMLFANEFFARS 129


>gi|271967568|ref|YP_003341764.1| polar amino acid ABC transporter inner membrane protein
           [Streptosporangium roseum DSM 43021]
 gi|270510743|gb|ACZ89021.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptosporangium roseum DSM 43021]
          Length = 274

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 13/187 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +  +     Y+          LV + L             F         P F  L 
Sbjct: 93  SRRRWVRLPAAAYVEVVRTVPALLLVYVVL-------------FALPRYGLDLPLFWKLV 139

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+   AA  AEI R+G+++V RGQ EA +A+GLTH +  R+++LPQA R ++P + SQ
Sbjct: 140 VPLAISNAAAFAEIFRAGILSVERGQSEAGLAVGLTHGQTMRMIVLPQAARRVLPSIVSQ 199

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLK++SL   V +A+L+  G  +    G  I+  ++   +YL ++  ++     L A
Sbjct: 200 SVGLLKDTSLGFVVSYAELLYSGKVLATYNGLLIQTYIVVALVYLVVNASLSKLARTLEA 259

Query: 391 KIALKEK 397
           +     +
Sbjct: 260 RQPRAHR 266


>gi|227819410|ref|YP_002823381.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227338409|gb|ACP22628.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 224

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +  +  + + + + G V+ L  T           +    LY++  +I   
Sbjct: 15  WRSFDLLLQGLALSLGLAIVAILAGCVIGLV-TAFGLVSKSSVLRKPAGLYVT--IIRNT 71

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y           F          +  S  + L+ Y+ A++AE+ R GLIAV
Sbjct: 72  PILVLVLFSY-----------FALPELGVRLGKIESFVLTLAIYSGAYLAEVFRGGLIAV 120

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EA +A+GLT  +    +++P  +R+++P L S  ++L K++SLA A+   +L   
Sbjct: 121 PPGQREAGLAIGLTEMQIRTSIIIPLMLRNVLPSLGSTMISLFKDTSLAAAIAVPELTFE 180

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  +T + IE  ++   +Y++   ++A  M  +  ++A+  
Sbjct: 181 ARKINVETFRVIETWIVASCLYVATCSLLAALMRAVERRLAVPR 224



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 33/88 (37%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A   ++   +IG +   G +S + ++     +YV + RN P LV++ F Y ++  +    
Sbjct: 32  AIVAILAGCVIGLVTAFGLVSKSSVLRKPAGLYVTIIRNTPILVLVLFSYFALPELGVRL 91

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                    + + +             A
Sbjct: 92  GKIESFVLTLAIYSGAYLAEVFRGGLIA 119


>gi|218507511|ref|ZP_03505389.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 219

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 4/220 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            LSF     +      + + V G + S     ++     + G +  L    T ++ GLP 
Sbjct: 1   MLSFALQFFNGLQITVLLALVSGALGSFLGLFVAMAKLSRLGVSALLGQAYTTIVRGLPE 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L++I + Y               G       F +   AL     A+ AEI R  +++VPR
Sbjct: 61  LLVILVVYFGGTAAIT----ALTGRYVEINAFAAGVAALMIVFGAYCAEIFRGAIMSVPR 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA +LGL   +    V+LPQ MR  +P   + +++L+K++SL   VG  D++ V  
Sbjct: 117 GQVEAARSLGLKPWQTWLFVILPQMMRVALPAYGNLWVSLVKDTSLVSVVGLTDIMRVAF 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                    +   L+   +YL+L+ +       L  ++ +
Sbjct: 177 IGAGSMRAPLPFYLVASALYLALTSLSLASFRALERRVQI 216


>gi|66046798|ref|YP_236639.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257505|gb|AAY38601.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330897283|gb|EGH28702.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330953617|gb|EGH53877.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
 gi|330972267|gb|EGH72333.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 232

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESFLWPWLSSATFCACLAFTINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLGLTFILVRLFKIAERR 222


>gi|238893922|ref|YP_002918656.1| arginine transporter permease subunit ArtM [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238546238|dbj|BAH62589.1| arginine 3rd transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 222

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 3/201 (1%)

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           IV  + +  L+     KT   + ++     L  G P LV I L Y      P L ++ ++
Sbjct: 24  IVALILSLILTIILTLKTPGLVWIVRGYITLFTGTPLLVQIFLIYYGPGQFPSLQEYPWL 83

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                 P ++   IALS  +AA+  ++    + A+P GQ ++  ALG++ +     +LLP
Sbjct: 84  WHLISEP-WLCALIALSLNSAAYTTQLFYGAIRAIPDGQWQSCSALGMSKKDTLA-ILLP 141

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A +  +   +++ + + K++SLA  +   +++  G  +  +T   + +      IYL +
Sbjct: 142 YAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQLLYGRTYDVM-VFGAAGIIYLIV 200

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           + ++ L M  +  K    E++
Sbjct: 201 NGLLTLLMRLVERKALAFERR 221



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +I A I+  ++          + WI R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIIVALILSLILTIILTLKTPGLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPSLQEYPWLWHLISEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|254444336|ref|ZP_05057812.1| ABC transporter, permease protein, putative [Verrucomicrobiae
           bacterium DG1235]
 gi|198258644|gb|EDY82952.1| ABC transporter, permease protein, putative [Verrucomicrobiae
           bacterium DG1235]
          Length = 262

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 16/226 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             N   +            + V    L +  +     LS   +    + LPL Y+    +
Sbjct: 46  HWNWSSVFKYKTKFIEGWLVTVLVSSLSLAFACLIGGLSALAYR--SRFLPLRYLFKIYV 103

Query: 230 ---FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
               G P LV + L + +           F   + +   ++   I LS ++ A+++EI R
Sbjct: 104 EITRGTPLLVQMLLIFYV-----------FADAAHIENRYVVGIIILSLFSGAYVSEIFR 152

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V   Q+ +A ++G T  +  R V+ PQA+   +P L  Q+ NL+K+SSL   +  
Sbjct: 153 AGIESVGSSQLLSAKSIGFTPYQTFRYVIFPQALSRSLPALAGQFANLIKDSSLLSIIAI 212

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++       +   T  A E        YL L++ I     RL  ++
Sbjct: 213 SEFTLNAQEVNTSTLSAFESFFPLAIGYLLLTLPIFHLSRRLEKQL 258



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 44/105 (41%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           L+  I  L   A F   +    ++S   Y T  + G++ T  ++   +  A +IG L   
Sbjct: 27  LAFSILCLLTLAAFASLEYHWNWSSVFKYKTKFIEGWLVTVLVSSLSLAFACLIGGLSAL 86

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
              S    + ++ ++YVE+ R  P LV +  ++        I + 
Sbjct: 87  AYRSRFLPLRYLFKIYVEITRGTPLLVQMLLIFYVFADAAHIENR 131


>gi|92112666|ref|YP_572594.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795756|gb|ABE57895.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 234

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 2/222 (0%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           +I + ++ +G+ L L     +R    +  +AL   Y +         
Sbjct: 12  WLGPILQGALVTLEIALLAYAIGLGLGLVG-ATARLSPWRPLRALGTAYSTLVRAIPELL 70

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+++           +L +        +   F++    L+    A++ E+ R  + A+PR
Sbjct: 71  LIILLYYAGSQALNALLAELGGDMHIEI-SGFVTAVGVLAFVQGAYMTEVFRGAIQAIPR 129

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA A G +       ++LP  + + +P +++ +L L+K+++L   +GF +L     
Sbjct: 130 GQLEAADAYGFSRPTRFHRIVLPAMLPNALPGMSNLWLILVKDTALISVIGFEELFFTAQ 189

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                T            +YL +++       R    +   +
Sbjct: 190 QAAASTRDYALFYAFAGALYLVMTLGSNALFARAERYVRRGQ 231



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +   IL G + T  +A         +G +    RLS  + +  +   Y  + R IP
Sbjct: 12  WLGPILQGALVTLEIALLAYAIGLGLGLVGATARLSPWRPLRALGTAYSTLVRAIP 67


>gi|321312271|ref|YP_004204558.1| glutamine ABC transporter permease [Bacillus subtilis BSn5]
 gi|320018545|gb|ADV93531.1| glutamine ABC transporter (permease) [Bacillus subtilis BSn5]
          Length = 218

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 17/230 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F    +   L+F          +   S +L     L A  L R+        L  + +
Sbjct: 1   MDFIDAYSQEHLAFLWDGFLVTLYVAFISIILSFFFGLIAGTL-RYAKVPVLSQLIAVLV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T        L L+ + +   F  P +G    I          +   AL+ + +A ++EI
Sbjct: 60  ETIRN-----LPLLLIIFFTFFALPEIGIKLEIT--------AAAITALTIFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL ++ +GQ+EAA + GL++ +    +++PQA+R ++PP+ SQ+++LLK++SLAV +
Sbjct: 107 IRSGLKSIDKGQIEAARSSGLSYTQTLFFIVMPQALRRMVPPIVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L+     I  Q+        I L+   +Y +++  ++L   RL  +
Sbjct: 167 ALPELIHNAQIINGQSADGSYFFPIFLLAALMYFAVNYSLSLAARRLEVR 216



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 39/77 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +  GF+ T ++AF  +I +   G + G  R +   +++ +  V VE  RN+P 
Sbjct: 8   SQEHLAFLWDGFLVTLYVAFISIILSFFFGLIAGTLRYAKVPVLSQLIAVLVETIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPI 158
           L++IFF + ++  +   
Sbjct: 68  LLIIFFTFFALPEIGIK 84


>gi|317405102|gb|EFV85448.1| amino acids ABC transporter [Achromobacter xylosoxidans C54]
          Length = 229

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 105/212 (49%), Gaps = 13/212 (6%)

Query: 191 VFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTF---LIFGLPTLVLIALKYQLH 245
           +    L ++L+L   A  L         +  P  ++      L+  +  + L+ L +  +
Sbjct: 22  LGGLALTLILALCGLALSLPLALAIALARVSPFGWLRVASKTLVNVVRGMPLLMLIFWAY 81

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P L          V   F +L  AL  Y +A+++E++RSG+ AVPRGQ+EA+ +LG+
Sbjct: 82  FVIPKLTG-------QVISGFWTLIAALVVYESAYLSEVIRSGIEAVPRGQIEASRSLGV 134

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
            +    R V+LPQA+ +++P +TSQ+++ +K +SL   +   +L      + N    + +
Sbjct: 135 GYWTTMRRVVLPQALFNVLPSMTSQFVSTIKETSLGYVISVNELTFAANQVNNLVLTKPL 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++  I   IY  +   ++  ++ L+ +I  + 
Sbjct: 195 QVFGILAIIYFLVCFSLSRGLSWLDLRIRRQR 226


>gi|317498348|ref|ZP_07956645.1| binding-protein-dependent transport system inner membrane component
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894370|gb|EFV16555.1| binding-protein-dependent transport system inner membrane component
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 218

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F  + + G++L +   +       +  K L +     F +  +    LI   Y  +F
Sbjct: 23  LILFFLTLIFGLILGMIIAK------GRMSKLLIIQMPIRFFLLIMRGTPLILQLYGFYF 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +   +            +  I  S   AA+ AEI RSG+ A+P+GQ EAA  LG  
Sbjct: 77  GLYYIAGLSL-------DRMTAAIIGFSLNYAAYFAEIYRSGIQAIPKGQYEAAKVLGFN 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++LPQ ++ I P L S+ + L+K++SLA  +G  ++  V    + ++ + +  
Sbjct: 130 RSQTFFKIILPQVVKIITPSLGSECMTLVKDTSLAHVIGVMEIYVVATNQMARS-RGMIY 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++    YL ++ +++   + +  ++    
Sbjct: 189 LVVAGIFYLIMNAIVSKVFSVIEKRMNYYR 218


>gi|293602768|ref|ZP_06685208.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292818784|gb|EFF77825.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 222

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 14/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++  F  V G+ L +      R    +  +     Y+   +I   P L+ +   +  
Sbjct: 23  VTVELIAFGAVAGVALGIV-CAWVRTQGPRWLRVPVTAYVE--VIRNTPFLIQLFFVF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F          E  +  +A++    A+  EI+R+G+ A P+GQ EA  +L 
Sbjct: 78  ---------FGLPSLGVQLGEMQAACLAMALNLGAYSTEIIRAGIDATPKGQYEAGASLA 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R V+L  A++ I P L+SQ + ++  S++   +   DL      I ++  +A 
Sbjct: 129 MTRLQVFRHVVLKPALKRIWPALSSQIVIVMLGSAVCSQIAAEDLTFAANFIQSRNFRAF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E+ L+   IYL L+I++   +     ++  K  +
Sbjct: 189 EVYLVTTGIYLVLAIVLRQLLRMAGRRLFRKAAR 222



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 40/112 (35%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + S   Y   ++ G   T  L   G +    +G +    R    + +      YVEV 
Sbjct: 5   YDFASVLDYTPVLIKGIGVTVELIAFGAVAGVALGIVCAWVRTQGPRWLRVPVTAYVEVI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           RN P L+ +FF++  + S+             M LN    S   +    +A 
Sbjct: 65  RNTPFLIQLFFVFFGLPSLGVQLGEMQAACLAMALNLGAYSTEIIRAGIDAT 116


>gi|269216149|ref|ZP_06160003.1| amino acid ABC transporter, permease protein [Slackia exigua ATCC
           700122]
 gi|269130408|gb|EEZ61486.1| amino acid ABC transporter, permease protein [Slackia exigua ATCC
           700122]
          Length = 217

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 11/218 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            LS          +IF  + +  + L +    L+R    K    +   YIS  ++ G P 
Sbjct: 6   MLSILGQGFVITLEIFFLTLIGSLPLGIVV-ALARMSRIKPISWITKFYIS--IMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ +   Y   +       + F    +   +F +  +A     AA+ AEI RSG+ +VPR
Sbjct: 63  MLQMFAIYFAPY-------YVFGIELSPGSKFTATIVAFVVNYAAYFAEIYRSGIQSVPR 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG +  +    ++LPQ ++ I+P + ++ + L+K++SLA ++G  ++ S   
Sbjct: 116 GQYEAAAVLGYSRAQTFMKIVLPQVIKRILPAMGNEVVTLVKDTSLAFSIGVMEMFSSAK 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I       +       F   +  ++I   M R+  K+
Sbjct: 176 AIAASQVNMLPFAFAAAFY-WAFCLIIEFVMGRIEKKL 212



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 38/69 (55%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+  + +  GFV T  + F  +I +  +G +V   R+S  K ++WI + Y+ + R  P +
Sbjct: 4   STMLSILGQGFVITLEIFFLTLIGSLPLGIVVALARMSRIKPISWITKFYISIMRGTPLM 63

Query: 143 VVIFFLYKS 151
           + +F +Y +
Sbjct: 64  LQMFAIYFA 72


>gi|229526721|ref|ZP_04416125.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae bv.
           albensis VL426]
 gi|229336879|gb|EEO01897.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae bv.
           albensis VL426]
          Length = 229

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F   G       F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFFITGEFIEISPFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRVVKVIDNKFSIQ 219


>gi|209517529|ref|ZP_03266369.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502062|gb|EEA02078.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 246

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 8/222 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             LS   +T+  +   +V + ++G +  +      R    K    +  +Y++ F    +P
Sbjct: 25  WLLSGLWVTVTVSLSAWVIALIVGSLFGVL-----RTVPNKWASGVGTVYVAIF--RNIP 77

Query: 234 TLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +V   + Y  +    PV     F         F +  + L  +TAA + E VRSG+ A+
Sbjct: 78  LIVQFFIWYLVIPELLPVSIGTWFKQLPPGVQFFSASIVCLGLFTAARVCEQVRSGINAL 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ  A +A+G T  +  R VLLP A R I+PPLTS++LN+ KNS++A  +G  DL + 
Sbjct: 138 PRGQRAAGLAVGFTQWQTYRYVLLPVAYRIIVPPLTSEFLNIFKNSAVASTIGLLDLSAQ 197

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +++ T Q  E  +     Y+ +++++   M  +  K  L
Sbjct: 198 ARQLVDYTSQTYESFIAVTVAYMLINVIVMFLMRWVEVKTRL 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 45/94 (47%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           + I    V     ++Y   +L G   T  ++ S  + A I+G+L G  R   NK  + + 
Sbjct: 7   WGILLSPVSTGEPTTYLGWLLSGLWVTVTVSLSAWVIALIVGSLFGVLRTVPNKWASGVG 66

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            VYV +FRNIP +V  F  Y  +  +LP+   + 
Sbjct: 67  TVYVAIFRNIPLIVQFFIWYLVIPELLPVSIGTW 100


>gi|329117370|ref|ZP_08246087.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907775|gb|EGE54689.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 213

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+   + + + S  LG VL+          + K  +    LY+  +++ G P L
Sbjct: 12  LDGAMVTLQVFSIVIILSIPLGAVLAFLM-----KVNFKPLQWFLTLYV--WVMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGITFDRMPAAILAFTMNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L ++  +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKMSQLQTIRHIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ L    +  + 
Sbjct: 174 AANRDA-TLAPMFIAGIIYLLLIGIVTLISRHVEKRF 209



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    +I +  +G ++        K + W   +YV V R  P L+ + F 
Sbjct: 11  LLDGAMVTLQVFSIVIILSIPLGAVLAFLMKVNFKPLQWFLTLYVWVMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D          +N              A 
Sbjct: 71  YYVLPSVGITFDRMPAAILAFTMNYAAYFAEIFRGGIEAI 110


>gi|325661856|ref|ZP_08150477.1| hypothetical protein HMPREF0490_01215 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471834|gb|EGC75051.1| hypothetical protein HMPREF0490_01215 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 215

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 12/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L   T        IFV + +  + L L      R    K    +  +YIS  ++ G P 
Sbjct: 6   MLRQMTAGFGQTCLIFVMTLIFSLPLGLLVY-FGRVSRIKLISWIVKIYIS--VMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ + + Y   F    L Q N  G      +  ++ +  S   AA+ AEI RSG+ ++P+
Sbjct: 63  MLQLLVWY---FAPYYLWQMNIGGY-----KLTAILLGCSLNYAAYFAEIYRSGIESIPK 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG + ++    ++LPQ +++++P +T++ + L+K++SL  ++ + ++ +V  
Sbjct: 115 GQYEAAALLGYSKQQTFLRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I       +    I    Y   +  +A  M     K+    
Sbjct: 175 QIAAA-QTTVVPFFIAGVFYYIFNYAVAWGMELFEKKLNYYR 215



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 36/73 (49%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  GF  T  +    +I +  +G LV  GR+S  KL++WI ++Y+ V R  P ++ +
Sbjct: 7   LRQMTAGFGQTCLIFVMTLIFSLPLGLLVYFGRVSRIKLISWIVKIYISVMRGTPLMLQL 66

Query: 146 FFLYKSVLSVLPI 158
              Y +   +  +
Sbjct: 67  LVWYFAPYYLWQM 79


>gi|324992502|gb|EGC24423.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324995968|gb|EGC27879.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|325697414|gb|EGD39300.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
 gi|327460726|gb|EGF07061.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327488810|gb|EGF20609.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 228

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +L    L + +  +  +   ++Y++         L+L      
Sbjct: 18  PVTLIIMVVAILLSFIPALLL-ALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +                   +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQIFKNLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     + + Q 
Sbjct: 137 GLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKDITALAKIEASHSYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   IYL +  +I      L  + AL
Sbjct: 197 SESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 36/93 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + I   L+  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGIPVTLIIMVVAILLSFIPALLLALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
               S+L     ++     +F  N       + 
Sbjct: 74  SLFPSLLNQIFKNLGSQVDVFKFNPLYYAFIIY 106


>gi|302384917|ref|YP_003820739.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302195545|gb|ADL03116.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 220

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 15/230 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                + + +  + LS   +T+       VFS V+GIV+++      +  +       PL
Sbjct: 1   MFDFSYFLEVFPKILSKLQVTLSLTFTAAVFSLVIGIVIAVIGYYRIKVLY-------PL 53

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                 ++ G P +  +   Y  ++    L +              ++ + LS  T AF+
Sbjct: 54  TRFYLSVLRGTPLVAQL---YFFYYGLARLSEIVL-----NMEPMTAVALVLSLNTGAFM 105

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +R  L +V  GQ EAA  LG+T  +    ++LPQA R  +P L +  +NLLK +SLA
Sbjct: 106 SESIRGALFSVEPGQKEAAAMLGMTELQTILRIVLPQAFRVALPSLFNDLINLLKATSLA 165

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +G  D++    +   Q+ +  EI L  M IY  L + +      L+ K
Sbjct: 166 FMLGIRDVMGQAKSEGAQSFRYFEIYLAVMLIYWLLVLALTRIHKVLDWK 215


>gi|289435076|ref|YP_003464948.1| amino acid ABC transporter, permease protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171320|emb|CBH27862.1| amino acid ABC transporter, permease protein [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 213

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 106/208 (50%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           AK  +  F + +V S+    L    +  K      +L I  +++ G P L+ +   Y   
Sbjct: 15  AKTTLLVFAVTLVCSIPLGALVAIGNVSKITPLKFILNIYIWIMRGTPLLLQLIFIY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P++          V     +++IA     AA+ AEI R G +++  GQ E+A  LGL
Sbjct: 72  YGLPII--------GIVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGL 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G   +++    I 
Sbjct: 124 TYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIP 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 184 LVLVAA-IYLALTAILTVLFKQLEKRFS 210



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G LV  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFAVTLVCSIPLGALVAIGNVSKITPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGIVFDRMDAVFIAFILNY 95


>gi|261344517|ref|ZP_05972161.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
 gi|282567429|gb|EFB72964.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 250

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 4/246 (1%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL--SLFAT 205
           ++++  S      H +   +  +     L    +++ T     +  F++       +   
Sbjct: 1   MFETFFSGDFWSAHLLAPQYLEWFGYGFLLTVWISVCTIIAATLLGFIVASARDSQIAPL 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R     +    +  PLL    F  F    ++  ++   L  + P    F  +  S  S E
Sbjct: 61  RWFVSAYISIFRNTPLLVQLFFWYFASGEILPASMMEWL--NTPHEVHFFGVMLSWPSFE 118

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++ ++ L+ YT  FIAE VRSG+  V +GQ +AA ALGLT  +A +LV+LPQA++  +P
Sbjct: 119 FLAGFVGLTLYTVPFIAEEVRSGIRGVRQGQKQAAFALGLTSWQAMKLVVLPQAVKIALP 178

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  QY+N++KNSSL +A+G A+L  V   + +Q+ Q      +   +Y+++  ++  + 
Sbjct: 179 PLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQSLQTFAAFGLATVLYIAIIALMEGWG 238

Query: 386 NRLNAK 391
                +
Sbjct: 239 QWRQQR 244



 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 56/168 (33%), Gaps = 3/168 (1%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F        +     Y      GF+ T W++   +I AT++G +V + R S    + W  
Sbjct: 5   FFSGDFWSAHLLAPQYLEWFGYGFLLTVWISVCTIIAATLLGFIVASARDSQIAPLRWFV 64

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             Y+ +FRN P LV +FF Y +   +LP    S++                         
Sbjct: 65  SAYISIFRNTPLLVQLFFWYFASGEILP---ASMMEWLNTPHEVHFFGVMLSWPSFEFLA 121

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
                 L  V  +     S     + G+      +       +  +VL
Sbjct: 122 GFVGLTLYTVPFIAEEVRSGIRGVRQGQKQAAFALGLTSWQAMKLVVL 169


>gi|229528369|ref|ZP_04417760.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           12129(1)]
 gi|254285779|ref|ZP_04960742.1| arginine ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|150424276|gb|EDN16214.1| arginine ABC transporter, permease protein [Vibrio cholerae
           AM-19226]
 gi|229334731|gb|EEO00217.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae
           12129(1)]
 gi|327485764|gb|AEA80170.1| Arginine ABC transporter, permease protein ArtQ [Vibrio cholerae
           LMA3894-4]
          Length = 229

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F   G       F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFFITGEFIEISPFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAVVYLVITLITQRAVKVIDNKFSIQ 219


>gi|227326270|ref|ZP_03830294.1| putative ABC transporter, permease [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 293

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 1/264 (0%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR    L  +F     + S+   P     +    F N   L+    T+   A   +FS  
Sbjct: 10  FRFAGALFSLFIFAGIIQSIALNPRWEWAVFAEWFFNPVILAGLGQTLLLTALGTLFSIF 69

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-F 254
            G  L+L     S      +   + L      ++  +       L  +L    P     F
Sbjct: 70  FGTALALARLSPSYLLSTLSWLYIWLFRSLPLILVLIILYNFSYLYDELALGIPFTSIVF 129

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                  +  +F    + L+   +A+ AEI+R G++ V  GQ EA+ ALGL   + T  +
Sbjct: 130 LNYPTIDLLDQFSVAVLGLTLVQSAYTAEIIRGGILGVDAGQFEASAALGLPGSRRTVRI 189

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++    Y
Sbjct: 190 ILPQALRSILPTGFNEIISLAKGTSIVYVLALPELFYTVQVIYNRTQQVIPLLMVATIWY 249

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
           L ++ ++++    +   ++    +
Sbjct: 250 LLITTVLSVVQYYVERYVSRGAVR 273


>gi|37525272|ref|NP_928616.1| glutamate/aspartate transport system permease protein GltK
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36784699|emb|CAE13599.1| Glutamate/aspartate transport system permease protein GltK
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 224

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + F    +   AKI + + V+GI+       + R    K       LY
Sbjct: 1   MYEFDWSSIIPSIPFLLQGLVITAKITIIAVVVGILWGTVL-AVMRLSSVKALSWFATLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A + + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--IVPSLVQNVLGISPKTDIRLISAMVAFAFFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R++ P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTPMQSMRLVILPQAFRAMTPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD       I  + G  +E+IL    +Y  +SI  ++ +N L  +
Sbjct: 175 LSLADFFRTAANIGERDGTQVEMILFAGLVYFIISIAASMLVNYLKKR 222



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 40/70 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    ++   + GT++   RLS+ K ++W   +YV +FR++P ++V+ + 
Sbjct: 16  LLQGLVITAKITIIAVVVGILWGTVLAVMRLSSVKALSWFATLYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSVLPI 158
           Y  V S++  
Sbjct: 76  YLIVPSLVQN 85


>gi|16759798|ref|NP_455415.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29142429|ref|NP_805771.1| arginine transporter permease ArtM [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161614847|ref|YP_001588812.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|168230795|ref|ZP_02655853.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168240769|ref|ZP_02665701.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168466506|ref|ZP_02700368.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168819948|ref|ZP_02831948.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194443230|ref|YP_002040126.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194450010|ref|YP_002044918.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194469096|ref|ZP_03075080.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197263817|ref|ZP_03163891.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242631|ref|YP_002214852.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389807|ref|ZP_03216418.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929999|ref|ZP_03221020.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205352137|ref|YP_002225938.1| arginine transporter permease ArtM [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207856320|ref|YP_002242971.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|213022066|ref|ZP_03336513.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213052698|ref|ZP_03345576.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213428041|ref|ZP_03360791.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213580629|ref|ZP_03362455.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213609526|ref|ZP_03369352.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213647862|ref|ZP_03377915.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|224582738|ref|YP_002636536.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|289825017|ref|ZP_06544380.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25296625|pir||AE0607 arginine transport system permease protein ArtM STY0921 [imported]
           - Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502091|emb|CAD05327.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138059|gb|AAO69620.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|161364211|gb|ABX67979.1| hypothetical protein SPAB_02600 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401893|gb|ACF62115.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194408314|gb|ACF68533.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194455460|gb|EDX44299.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|195630950|gb|EDX49536.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197242072|gb|EDY24692.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197937147|gb|ACH74480.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602252|gb|EDZ00798.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204320993|gb|EDZ06194.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205271918|emb|CAR36761.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205334830|gb|EDZ21594.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339892|gb|EDZ26656.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205343002|gb|EDZ29766.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|206708123|emb|CAR32416.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467265|gb|ACN45095.1| arginine transport system permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|320085162|emb|CBY94949.1| L-cystine transport system permease protein tcyB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|322713919|gb|EFZ05490.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|326622605|gb|EGE28950.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326627180|gb|EGE33523.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 222

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S  + +VL+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTII---LTLKTPFVVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPLLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVV-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +  A ++  +           V W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|254250402|ref|ZP_04943721.1| amino acid ABC transporter permease protein [Burkholderia
           cenocepacia PC184]
 gi|124879536|gb|EAY66892.1| amino acid ABC transporter permease protein [Burkholderia
           cenocepacia PC184]
          Length = 248

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPRWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    IYL L+ ++   +  L  +++
Sbjct: 197 VFVCAAIIYLGLNFIVVRVLGALEWRLS 224


>gi|217964113|ref|YP_002349791.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes HCC23]
 gi|254832443|ref|ZP_05237098.1| hypothetical protein Lmon1_13894 [Listeria monocytogenes 10403S]
 gi|290893397|ref|ZP_06556382.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|217333383|gb|ACK39177.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes HCC23]
 gi|290557048|gb|EFD90577.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|307571320|emb|CAR84499.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes L99]
          Length = 213

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 107/208 (51%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           AK  +  FV+ +V S+    +    +  K      +L I  +++ G P L+ +   Y   
Sbjct: 15  AKTTLLVFVVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQLIFIY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P++          V     +++IA     AA+ AEI R G +++  GQ E+A  LGL
Sbjct: 72  YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGL 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G   +++    I 
Sbjct: 124 TYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIP 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 184 LVLVAA-IYLALTAILTVLFKQLEKRFS 210



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFVVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 95


>gi|153833137|ref|ZP_01985804.1| arginine ABC transporter, permease protein [Vibrio harveyi HY01]
 gi|156976756|ref|YP_001447662.1| arginine transporter permease subunit ArtM [Vibrio harveyi ATCC
           BAA-1116]
 gi|148870567|gb|EDL69475.1| arginine ABC transporter, permease protein [Vibrio harveyi HY01]
 gi|156528350|gb|ABU73435.1| hypothetical protein VIBHAR_05531 [Vibrio harveyi ATCC BAA-1116]
          Length = 222

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++   S V+G +L+L  T        +T     +      L  
Sbjct: 1   MNEQHVWQMLDGLGTSLQLTAASLVVGCLLALMMTL---TLILRTPGLHWVSRGIITLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +  F   + +S  +    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDAVRESVF--WTWLSQPWFCAMLALALNTAAYSTQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPSGQWQACRALGMNKAATL-KVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|118471268|ref|YP_887851.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Mycobacterium smegmatis str. MC2 155]
 gi|118172555|gb|ABK73451.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mycobacterium smegmatis str. MC2 155]
          Length = 237

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 15/229 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTGKALPLLYISTFLI 229
              L      +       V   V GI++++    +    R    +  +A   +++  F  
Sbjct: 1   MNQLLQYQSLLWEGLWTTVLVTVFGILIAVVVAFVVGFMRLSRHRIVRAPAYVFVEFF-- 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G   LV +A    + +  P L       G   +   ++  + L     A+ AEIVR  +
Sbjct: 59  RGTSILVQLA---WVVYALPFL-------GVRFTDNLVAGIVVLGLNEGAYAAEIVRGAI 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            + PRGQ EAA+ALG+   +  R +L+PQ++  ++P   +  ++LLK + L   +G AD 
Sbjct: 109 ASRPRGQTEAAVALGMKPAQRMRRILVPQSIPVMLPSFGNVAVDLLKATPLVYFIGVADF 168

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + G  I  +T     I+L  + +Y  L++++A     L  +  L+ ++
Sbjct: 169 TANGLAIRTETQDTTTILLTLLVVYFILALILAAITRWLENRFGLEHRR 217



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 35/70 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y + +  G   T  +   G++ A ++  +VG  RLS +++V     V+VE FR    LV
Sbjct: 6   QYQSLLWEGLWTTVLVTVFGILIAVVVAFVVGFMRLSRHRIVRAPAYVFVEFFRGTSILV 65

Query: 144 VIFFLYKSVL 153
            + ++  ++ 
Sbjct: 66  QLAWVVYALP 75


>gi|187733618|ref|YP_001879338.1| glutamate/aspartate ABC transporter permease GltK [Shigella boydii
           CDC 3083-94]
 gi|187430610|gb|ACD09884.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Shigella boydii CDC 3083-94]
          Length = 224

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 63/230 (27%), Positives = 111/230 (48%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       + R             Y
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTML-AVMRLSSFAPVAWFAKAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F    L  ++L      L F + VLG              +S  +A S + AA+ +E
Sbjct: 60  VNVFRSIPLVMVLLWFYLIVLGFLQNVLGL-----SPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 38/66 (57%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  VL
Sbjct: 75  FYLIVL 80


>gi|146311035|ref|YP_001176109.1| arginine transporter permease subunit ArtM [Enterobacter sp. 638]
 gi|145317911|gb|ABP60058.1| L-arginine ABC transporter membrane protein [Enterobacter sp. 638]
          Length = 222

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S V+ ++L+L  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELMKGLHTSLTLTVASIVVALILALIFTIV---LTLKTPVLVWIVRAYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  I      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPVIWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      +YL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGLVYLIVNGLLTLMMRLIENKALAFERR 221



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + ++ A I+  +          ++ WI R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASIVVALILALIFTIVLTLKTPVLVWIVRAYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|46907970|ref|YP_014359.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b F2365]
 gi|226224343|ref|YP_002758450.1| amino acid (glutamine) ABC transporter, permease protein [Listeria
           monocytogenes Clip81459]
 gi|255520514|ref|ZP_05387751.1| hypothetical protein LmonocFSL_04656 [Listeria monocytogenes FSL
           J1-175]
 gi|46881240|gb|AAT04536.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|225876805|emb|CAS05514.1| Putative amino acid (glutamine) ABC transporter, permease protein
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|328473974|gb|EGF44790.1| hypothetical protein LM220_02221 [Listeria monocytogenes 220]
          Length = 213

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG V+++           K      +L I  +++ G P L
Sbjct: 12  LDGAKTTLLVFAVTLVCSIPLGAVVAVGNIS-------KIAPLKFILNIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     +++IA     AA+ AEI R G +++  G
Sbjct: 65  LQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 114 QYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 174 AMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKRFS 210



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 95


>gi|325576796|ref|ZP_08147411.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161002|gb|EGC73120.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 219

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + + +  R +    +T+       + S V+G++ ++        +  K+   L   
Sbjct: 1   MNWDYILSVTPRFIHATLMTLHLAFWGILLSLVIGVICAVIT-----TYKVKSLTWLVKG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y           F           F    I L+    +++A
Sbjct: 56  YIE--LSRNTPLLIQVFFLY-----------FGLSKIGLKLDGFTCGIIGLAFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R GL AV +GQ+E+A+++GLT  +A R V+ PQA     P + +  L L+K +S+  
Sbjct: 103 EAIRGGLEAVSKGQIESALSIGLTPFQAFRYVIFPQAFAIATPAIGANCLFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           AV  A+L+ V   +I    +  E + + +  YL + + ++LF++ L  +   
Sbjct: 163 AVAVAELMFVAKEVIGLDYKTNEALFLLVVFYLIILLPMSLFISYLERRTRR 214



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  LAF G++ + +IG +         K + W+ + Y+E+ RN P L+ +FFL
Sbjct: 13  FIHATLMTLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFL 72

Query: 149 YKSV 152
           Y  +
Sbjct: 73  YFGL 76


>gi|15965625|ref|NP_385978.1| amino acid ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|307314029|ref|ZP_07593642.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307321206|ref|ZP_07600608.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15074806|emb|CAC46451.1| Hypothetical amino-acid ABC transporter permease [Sinorhizobium
           meliloti 1021]
 gi|306893108|gb|EFN23892.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306899151|gb|EFN29790.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 276

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 7/215 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               + + S ++G VLSL    L R    +    L   Y+  F   G P +  + L Y  
Sbjct: 68  VTLTLVISSILMGAVLSL-PVALGRMSKNRLWGWLAYAYVYFF--RGTPLITQLFLIYYG 124

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L   +P L              +       +  TAA+ AEI+R  + +VPRGQ E A AL
Sbjct: 125 LGSFRPQLETVGLWW--FFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQREGAAAL 182

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL  R A   V+LPQAM   + P  ++ + ++K S++   V   DL+       ++T   
Sbjct: 183 GLPERVAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTFDY 242

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++ +    +YL +  ++      L A++    K+
Sbjct: 243 -QMYIWAAILYLLMVELLRNIWGWLEARLTRHLKR 276



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 40/97 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y  + L G   T  L  S ++   ++   V  GR+S N+L  W+   YV  FR  P +
Sbjct: 56  SRYGPSFLSGLGVTLTLVISSILMGAVLSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLI 115

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
             +F +Y  + S  P  +   +  F     N  L   
Sbjct: 116 TQLFLIYYGLGSFRPQLETVGLWWFFRDAWNCALFTF 152


>gi|330952973|gb|EGH53233.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 226

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                F+ + +LG  L+L   RLSRH   +T   +   Y+  F    +P L  + + Y  
Sbjct: 31  LTLAAFIVAALLGFFLALM--RLSRH---RTLGFIASCYLEIF--RNIPILTQLFILY-- 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P   +  I      AA ++E+ RS +  + +GQ EAA ++G
Sbjct: 82  ---------FGLTYIGITLPAVGAAIIGFGLNGAAILSEVFRSSIKTIDKGQAEAAYSIG 132

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T   A R+++LPQA +  IP + +  + LLK++SLA A    ++      ++++T Q  
Sbjct: 133 MTRSMAMRIIVLPQAFKISIPGMANFAIGLLKDTSLASAAAVPEMTFKAKMLVSETYQTN 192

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I  +   IYL+LS+ IA + +R   ++ +
Sbjct: 193 LIYFLLAIIYLALSLFIAYWASRTERRLNV 222



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 5/113 (4%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           + + + F     ++PY     +   + VG + T  L  +  I A ++G  +   RLS ++
Sbjct: 1   MVDSSAFGKAFEMLPY-----FLNVLGVGALTTVGLTLAAFIVAALLGFFLALMRLSRHR 55

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            + +I   Y+E+FRNIP L  +F LY  +  +            G  LN   +
Sbjct: 56  TLGFIASCYLEIFRNIPILTQLFILYFGLTYIGITLPAVGAAIIGFGLNGAAI 108


>gi|260587478|ref|ZP_05853391.1| polar amino acid uptake family ABC transporter, permease protein
           [Blautia hansenii DSM 20583]
 gi|260541743|gb|EEX22312.1| polar amino acid uptake family ABC transporter, permease protein
           [Blautia hansenii DSM 20583]
          Length = 215

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 12/209 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            IF  + VL + L L      R    K    +   YIS  ++ G P ++ + + Y   + 
Sbjct: 19  LIFFMTLVLSLPLGLVMY-FGRVSKIKLVSGIVKFYIS--VMRGTPLMLQLLVWYYAPY- 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                     G +    +  ++ +  S   AA+ AEI RSG+ A+PRGQ EAA  LG + 
Sbjct: 75  -------YLWGMNIGGYKLTAILLGCSLNYAAYFAEIYRSGIEAIPRGQYEAAAILGYSG 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           ++    ++LPQ +++++P +T++ + L+K++SL  ++ + ++ +V   I       I   
Sbjct: 128 QQTFFRIILPQMIKNVLPTVTNEVITLVKDTSLVYSLSYVEMFAVAKQIAAA-QTTIVPF 186

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I    Y   + ++A  M     K+    
Sbjct: 187 FIAGAFYYIFNYIVAKVMEMFEKKMNYYR 215



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               +  GF  T  + F  ++ +  +G ++  GR+S  KLV+ I + Y+ V R  P ++ 
Sbjct: 6   IMREMTAGFGQTCLIFFMTLVLSLPLGLVMYFGRVSKIKLVSGIVKFYISVMRGTPLMLQ 65

Query: 145 IFFLYKSVLSVLPI 158
           +   Y +   +  +
Sbjct: 66  LLVWYYAPYYLWGM 79


>gi|70732346|ref|YP_262102.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68346645|gb|AAY94251.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 229

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 13/204 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +  F L +V+ L      R       +A    YIS F   G P LV I + Y       +
Sbjct: 29  ICGFALAVVVGL-----GRVSRNPLIRAPMQFYISVF--RGTPLLVQIYILYYG--VGSL 79

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +  I GS + P     F  + +AL+    A++ E++R GL AVPRG++EAA A G+ 
Sbjct: 80  FAAYPPIRGSFLWPYLREGFWYVALALTLSVGAYVGEVLRGGLRAVPRGELEAARAYGMG 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H    R V LP+A+  + P L  + + LLK ++LA  V   DL+     +  QT +  E 
Sbjct: 140 HWLTLRRVWLPRALELVRPTLVGECVLLLKATALASTVAVTDLLGAANLVRAQTLKVYEP 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
           +L    IY+ L+ +I     RL  
Sbjct: 200 LLAVALIYIVLAFVIEHLCARLGK 223



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 3/150 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L     I    +  +VG GR+S N L+    + Y+ VFR  P LV I+ L
Sbjct: 13  LLRGLGITLKLLLLSGICGFALAVVVGLGRVSRNPLIRAPMQFYISVFRGTPLLVQIYIL 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL- 207
           Y  V S+              +L   G  +  L +  +   +V   + G + ++    L 
Sbjct: 73  YYGVGSLFAAYPPIRGSFLWPYL-REGFWYVALALTLSVGAYVGEVLRGGLRAVPRGELE 131

Query: 208 -SRHFHEKTGKALPLLYISTFLIFGLPTLV 236
            +R +       L  +++   L    PTLV
Sbjct: 132 AARAYGMGHWLTLRRVWLPRALELVRPTLV 161


>gi|225076169|ref|ZP_03719368.1| hypothetical protein NEIFLAOT_01201 [Neisseria flavescens
           NRL30031/H210]
 gi|224952512|gb|EEG33721.1| hypothetical protein NEIFLAOT_01201 [Neisseria flavescens
           NRL30031/H210]
          Length = 219

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAIPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  L L+K +S+  
Sbjct: 103 EAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +I  
Sbjct: 163 AVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIRR 214



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|152969250|ref|YP_001334359.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238893714|ref|YP_002918448.1| glutamate/aspartate transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|150954099|gb|ABR76129.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238546030|dbj|BAH62381.1| glutamate/aspartate transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 224

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + V+GIV       +      +    +PL +
Sbjct: 1   MYDFDWSSIVPSMPYLLAGLVITLKITVIAIVVGIVWGTLLAVM------RLSSFMPLAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKSYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGGVYFVISLSASLLVSWLKKR 222



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 36/66 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +    ++   + GTL+   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVIAIVVGIVWGTLLAVMRLSSFMPLAWFAKSYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|329296934|ref|ZP_08254270.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 218

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                        +       + S V     +L    L      +      L+   T L 
Sbjct: 1   MTTFTDWDILRNLLLAARWTILLSLVAFFGGTLVTLPLLFLRLLQRRWFTRLIRCYTELF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ YT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLGLFGIDVAPWTAASLALTLYTSAFLLDIWYGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+  LGL   +    V+ PQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 RALPKGQWEASRCLGLNFGQTLYRVVAPQAIRIAIAPTVGFAVQVIKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 170 TKAGTILNNVTYQPFKVFGMVALGYFLMCYPLSRYSQYLEKKF 212


>gi|164688273|ref|ZP_02212301.1| hypothetical protein CLOBAR_01918 [Clostridium bartlettii DSM
           16795]
 gi|164602686|gb|EDQ96151.1| hypothetical protein CLOBAR_01918 [Clostridium bartlettii DSM
           16795]
          Length = 210

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 108/223 (48%), Gaps = 18/223 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    +T++      +FS +LG+ ++    R+S++   +       + +   ++ G P
Sbjct: 6   NMLPSSIVTLEIFFLTIIFSSILGMFVAF--GRMSKYAIIRIP-----IQVFLLIMRGTP 58

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ +   Y   +             +   P F +  +A +   +A+IAEI RSG+ ++P
Sbjct: 59  LILQLMFFYFAPYYI----------FAATLPRFWAAILAFTLNYSAYIAEIYRSGIESIP 108

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA  LG    +    ++LPQ ++ IIPP++++ + L+K+++LA  +G A++  + 
Sbjct: 109 VGQYEAATVLGFGKAETFFKIILPQVVKRIIPPMSNELMTLVKDTALAQVIGVAEIFKLA 168

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  ++     +  +++    YL ++ ++  F   L  K+   E
Sbjct: 169 GATMSSQFSTVP-LIVAGVFYLIMNAVVERFCFYLEKKLDYYE 210


>gi|170735091|ref|YP_001774205.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169821129|gb|ACA95710.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 248

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPRWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFSLLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    IYL L+ ++   +  L  +++
Sbjct: 197 VFVCAAIIYLGLNFIVVRVLGALEWRLS 224


>gi|301155143|emb|CBW14607.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 219

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + + +  R +    +T+       + S V+G++ ++        +  K+   L   
Sbjct: 1   MNWDYILSVTPRFIHATLMTLHLAFWGILLSLVIGVICAVIT-----TYKVKSLTWLVKG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y           F           F    I L+    +++A
Sbjct: 56  YIE--LSRNTPLLIQVFFLY-----------FGLSKIGLKLDGFTCGIIGLAFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R GL AV +GQ+E+A+++GLT  +A R V+ PQA     P + +  L L+K +S+  
Sbjct: 103 EAFRGGLEAVSKGQIESALSIGLTPYQAFRYVIFPQAFAIATPAIGANCLFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           AV  A+L+ V   +I    +  E + + +  YL + + ++LF+  L  +   
Sbjct: 163 AVAVAELMFVAKEVIGLDYKTNEALFLLVVFYLIILLPMSLFIGHLERRTRR 214



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  LAF G++ + +IG +         K + W+ + Y+E+ RN P L+ +FFL
Sbjct: 13  FIHATLMTLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFL 72

Query: 149 YKSV 152
           Y  +
Sbjct: 73  YFGL 76


>gi|239983306|ref|ZP_04705830.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 290

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 26/251 (10%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           ++   +                  +    L     T+   A   V S VLG VL++    
Sbjct: 41  WILYLLFDTDQFTTAKWRPFAYTGIQELLLRGLGNTLKAFAYASVLSLVLGGVLAV---- 96

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    +  + +  + +  F                     PVL    F+  +      
Sbjct: 97  -GRLSDHRPVRWVATVIVEFFR------------------AMPVLVMIFFVFVALQVQAL 137

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L   L+ Y  + +AE+ RSG+ +V +GQ EAA ALG+   +    VL PQA+R+++P 
Sbjct: 138 PALVTGLTLYNGSVLAEVFRSGVNSVDKGQREAAYALGMRKTQVMVQVLAPQALRAMLPA 197

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIAL 383
           + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ + ++++ 
Sbjct: 198 IISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGMCMLLSW 257

Query: 384 FMNRLNAKIAL 394
           F   ++ +   
Sbjct: 258 FAQWVSRRQRR 268



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 25/145 (17%)

Query: 14  SRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
                LYD      R  +    ++  L +  I  W +                  L +  
Sbjct: 7   QEPSALYDVPGPKARKRHRIFGVLATLAIAAILGWILY----------------LLFDTD 50

Query: 69  GFEIDQG-IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
            F   +     YT        +L G  NT        + + ++G ++  GRLS ++ V W
Sbjct: 51  QFTTAKWRPFAYTG---IQELLLRGLGNTLKAFAYASVLSLVLGGVLAVGRLSDHRPVRW 107

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSV 152
           +  V VE FR +P LV+IFF++ ++
Sbjct: 108 VATVIVEFFRAMPVLVMIFFVFVAL 132


>gi|123444359|ref|YP_001008324.1| putative amino acid transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122091320|emb|CAL14206.1| putative amino acid transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 251

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 11/222 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   + S + G+  ++  T L        G    +L       
Sbjct: 10  WTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTALGVALAISRGVWAAVLAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPMVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGAGQWQAGLSLGFNRWQVLWFVILPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +   + N++    +E+ L    +Y  L + + L  N LN 
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLDLLANALNR 221


>gi|328956869|ref|YP_004374255.1| glutamine transport system permease protein GlnP [Carnobacterium
           sp. 17-4]
 gi|328673193|gb|AEB29239.1| glutamine transport system permease protein GlnP [Carnobacterium
           sp. 17-4]
          Length = 216

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 19/228 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T++      VFSF++G +L L        F +  G          
Sbjct: 7   FSWMNIRFLLDGLLVTVEVAVLSIVFSFIIGAILGLLRYMKIPVFSKIVG---------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++  +  L L+ + +  +F  P +              F S   A++ + +A ++EI+R
Sbjct: 57  GIVDLIRNLPLLLIIFFTYFALPQI--------GIRLDIFWSAVAAMTIFESAMLSEIMR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL +VP GQMEA  + GLT+ +   ++++PQA ++++PP+ SQ ++L+K++SLA  +  
Sbjct: 109 AGLNSVPSGQMEAGRSTGLTYLQTLWIIIIPQAFKAMVPPIVSQLVSLIKDTSLATIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +L      I  Q T   I + +   F Y  +   ++    R   K++
Sbjct: 169 PELTHNARIIYGQNTTYVIPMFIALAFFYFIICYALSKVAKRFETKLS 216



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 38/83 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G + T  +A   ++ + IIG ++G  R     + + I    V++ RN+P 
Sbjct: 8   SWMNIRFLLDGLLVTVEVAVLSIVFSFIIGAILGLLRYMKIPVFSKIVGGIVDLIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV 164
           L++IFF Y ++  +    D    
Sbjct: 68  LLIIFFTYFALPQIGIRLDIFWS 90


>gi|315619868|gb|EFV00387.1| arginine transport system permease protein artM [Escherichia coli
           3431]
          Length = 214

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 100/215 (46%), Gaps = 6/215 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T+  + V S ++ ++L+L  T +      KT   + L+     L  G P LV I L Y 
Sbjct: 5   HTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTGTPLLVQIFLIYY 61

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P L ++  +      P ++   IALS  +AA+  ++    + A+P GQ ++  AL
Sbjct: 62  GPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPEGQWQSCSAL 120

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++ +     +LLP A +  +   +++ + + K++SLA  +   +++     +  +T   
Sbjct: 121 GMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLLYGRTYDV 179

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +      IYL ++ ++ L M  +  K    E++
Sbjct: 180 M-VFGAAGIIYLVVNGLLTLMMRLIERKALAFERR 213



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 37/109 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV IF +Y
Sbjct: 1   MKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQIFLIY 60

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
                   + ++  +           L   +L          +  +  I
Sbjct: 61  YGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 109


>gi|292492726|ref|YP_003528165.1| ectoine/hydroxyectoine ABC transporter permease protein EhuD
           [Nitrosococcus halophilus Nc4]
 gi|291581321|gb|ADE15778.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Nitrosococcus halophilus Nc4]
          Length = 217

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 97/231 (41%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               + + +    L    +T+         + +LG+  ++      R     T       
Sbjct: 3   FDWQYALDILPDLLRGFWVTIQATFWGMTAALILGLAWAILRRSAIRIMATITA------ 56

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                 I   P LV +   Y L F  P                F++  + L  + + + +
Sbjct: 57  -WVVEFIRSTPLLVQL---YFLFFVLPEF--------GVTLSPFLTGVVGLGLHYSTYTS 104

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+G+  VP GQ EAAIAL ++     + ++LPQA+  +IP L +  + + K++ L  
Sbjct: 105 EVYRAGIEGVPEGQWEAAIALNMSRFHIWKAIILPQAIPPVIPALGNYLIAMFKDTPLLA 164

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+   +L+        +T + +E + +   ++L +S++ +  + +L A+ A
Sbjct: 165 AITVMELLQTAKLSGAETFRYLEPLTLVGLLFLVISLLSSRLIRKLEARFA 215



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 36/81 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T    F GM  A I+G      R SA +++A I    VE  R+ P LV ++FL
Sbjct: 15  LLRGFWVTIQATFWGMTAALILGLAWAILRRSAIRIMATITAWVVEFIRSTPLLVQLYFL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           +  +          +    G+
Sbjct: 75  FFVLPEFGVTLSPFLTGVVGL 95


>gi|253690233|ref|YP_003019423.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756811|gb|ACT14887.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 238

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 97/241 (40%), Gaps = 4/241 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +         F  +       +       + +  F+LG V+       S+    +  + 
Sbjct: 1   MEDITFWQLISFGEHGWGKLLLIGAGMTLALAICGFLLGAVIGTIG-AWSKICGNRPVRY 59

Query: 219 LPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           L   Y  T +  G+P L++I  L +       +L +          P F++   A+   +
Sbjct: 60  LADGY--TTITRGIPDLLIIYLLYFGGSSALTLLAKLFGSNEFLGFPGFLAGVFAVGISS 117

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A   E+ R    AV +G++EAA A G+      R +++P  +R  IP L + +  +LK 
Sbjct: 118 GAQQTEVYRGAFYAVSKGEIEAAKACGMPTMLRLRRIIMPLLLRHAIPALGNVWQLVLKT 177

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           S+L    G A+L++   T    TG+  +  +    +YL +SI     M R  +  +   K
Sbjct: 178 SALVSVTGVAELMTQSQTGAGSTGKPFDFFMAAALLYLLISIGSGWIMRRAESHYSRGVK 237

Query: 398 K 398
           +
Sbjct: 238 R 238



 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 35/71 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+G   T  LA  G +   +IGT+    ++  N+ V ++   Y  + R IP L++
Sbjct: 17  WGKLLLIGAGMTLALAICGFLLGAVIGTIGAWSKICGNRPVRYLADGYTTITRGIPDLLI 76

Query: 145 IFFLYKSVLSV 155
           I+ LY    S 
Sbjct: 77  IYLLYFGGSSA 87


>gi|186473669|ref|YP_001861011.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196001|gb|ACC73965.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 218

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 14/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +   SF  G +L++    L R  H    +   L  I TF       +V + L + 
Sbjct: 18  PWTLAMTGLSFAFGALLAIPLCGL-RTAHNPVLRNCALSLILTFRSIPP--IVWLFLIF- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F           F+S  I L   TAA +AEI R  L AVP GQ EAA AL
Sbjct: 74  ----------FGVGSDLIPLSPFVSAVIGLGLITAANVAEIYRGALKAVPAGQYEAARAL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL        VL+PQ  R  +P L +  + LLK++++A  +G  DL      +  +T + 
Sbjct: 124 GLPALLQYHDVLIPQIFRLALPSLATYAIGLLKDTAVASTIGVHDLAFSAYRVSQETFRG 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           IE+   +  +Y  +S+ +A     L+ ++  +  +
Sbjct: 184 IEVYAAFGLVYFLISLAMAYATRGLDRRLRERISR 218


>gi|331266483|ref|YP_004326113.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
 gi|326683155|emb|CBZ00773.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
          Length = 213

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +    L+  ++T+   A + +FS  LGIV++       +  H        L+ +
Sbjct: 1   MSYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFALQVRWKPLHY-------LIDL 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                       +  IA     AA+ AEI
Sbjct: 54  YIWVMRGTPLLLQLIFIYYV-----------LPSIGIRLDRLPAAVIAFVLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+  +P+GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+
Sbjct: 103 FRGGIETIPKGQYEAAKVLKFSPFSTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +DL+    T  N+    + + L    IYL +  ++ +   +L  K +   
Sbjct: 163 GISDLILASRTAANRDASLVPMFL-AGAIYLIMIGLVTIVAKKLEKKYSYYR 213



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 4/94 (4%)

Query: 84  SYATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           SY   IL   +N    T  +    +I +  +G +V        K + ++  +Y+ V R  
Sbjct: 2   SYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFALQVRWKPLHYLIDLYIWVMRGT 61

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           P L+ + F+Y  + S+    D          LN 
Sbjct: 62  PLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNY 95


>gi|317491136|ref|ZP_07949572.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920683|gb|EFV42006.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 246

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   ++ +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSICAWIIAFFVGSIFGILRTVPNRFLSTI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GMCYVELFRNVPLIVQFFTWYLVIPELLPADLGMWFKSELDPNVQF-----------FVS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VRSG+ ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SMLCLGLFTAARVCEQVRSGIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++ +I L M+ +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLVMHFV 233

Query: 389 NAKIAL 394
             KI L
Sbjct: 234 ERKIQL 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 10/101 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    I A  +G++ G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIWSGFQVTVALSICAWIIAFFVGSIFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            R   N+ ++ I   YVE+FRN+P +V  F  Y  +  +LP
Sbjct: 53  LRTVPNRFLSTIGMCYVELFRNVPLIVQFFTWYLVIPELLP 93


>gi|300722326|ref|YP_003711611.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628828|emb|CBJ89406.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 246

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++      L R    K    +
Sbjct: 6   NWGIFLQAAPFGNTTYLGWLISGFQVTITLSICAWIIAFIVGSLFGIL-RTVPNKFLAGI 64

Query: 220 PLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              Y+  F    +P +V     Y +   F    +  +  +        F+S  I L  +T
Sbjct: 65  GTCYVELF--RNVPLIVQFFTWYMVVPEFLPRDVSNWFKMELDPNIQFFISSMICLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA I E VR+ + ++P+GQ  A +A+GLT  +  R VLLP A R IIPP+TS+ LNL+KN
Sbjct: 123 AARICEQVRAAIQSLPKGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++++I L M  L  KI L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYIGINLVIMLAMTLLEKKIRL 239



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 40/83 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++ GF  T  L+    I A I+G+L G  R   NK +A I   YVE+FRN+P +V
Sbjct: 20  TYLGWLISGFQVTITLSICAWIIAFIVGSLFGILRTVPNKFLAGIGTCYVELFRNVPLIV 79

Query: 144 VIFFLYKSVLSVLPIPDHSIVLP 166
             F  Y  V   LP    +    
Sbjct: 80  QFFTWYMVVPEFLPRDVSNWFKM 102


>gi|168236833|ref|ZP_02661891.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194735510|ref|YP_002113981.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197251237|ref|YP_002145841.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|238913405|ref|ZP_04657242.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|194711012|gb|ACF90233.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197214940|gb|ACH52337.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197290110|gb|EDY29467.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|322616362|gb|EFY13271.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619612|gb|EFY16487.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622692|gb|EFY19537.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628604|gb|EFY25391.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631541|gb|EFY28297.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637068|gb|EFY33771.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641733|gb|EFY38369.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644474|gb|EFY41014.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650065|gb|EFY46482.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654142|gb|EFY50465.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658057|gb|EFY54324.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663531|gb|EFY59733.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670267|gb|EFY66407.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671503|gb|EFY67625.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676859|gb|EFY72926.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682784|gb|EFY78803.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686463|gb|EFY82445.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323196083|gb|EFZ81246.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196771|gb|EFZ81915.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202950|gb|EFZ87984.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208990|gb|EFZ93927.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211895|gb|EFZ96723.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215173|gb|EFZ99918.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222376|gb|EGA06754.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323223892|gb|EGA08191.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229851|gb|EGA13974.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233076|gb|EGA17172.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240811|gb|EGA24853.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243128|gb|EGA27148.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248670|gb|EGA32598.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251671|gb|EGA35538.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257341|gb|EGA41039.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261929|gb|EGA45495.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267945|gb|EGA51424.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323271988|gb|EGA55403.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 222

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S  + +VL+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTII---LTLKTPFVVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPLLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +  A ++  +           V W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|90962038|ref|YP_535954.1| polar amino acid ABC transporter permease [Lactobacillus salivarius
           UCC118]
 gi|227891057|ref|ZP_04008862.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|301300403|ref|ZP_07206605.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90821232|gb|ABD99871.1| Polar amino acid ABC transporter, permease protein [Lactobacillus
           salivarius UCC118]
 gi|227867146|gb|EEJ74567.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus salivarius ATCC 11741]
 gi|300214736|gb|ADJ79152.1| Polar amino acid ABC transporter, permease protein [Lactobacillus
           salivarius CECT 5713]
 gi|300852005|gb|EFK79687.1| ABC transporter, permease protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 213

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 101/229 (44%), Gaps = 19/229 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L    +T+       + S  LG+++ L      R           +L  
Sbjct: 1   MNYVLEVLPSLLDGAKMTLQIFCWTLIGSLPLGLIVGLALISRFRLLK-------AILRF 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +L+ G P L+ +   +   +  P++              F +   A      A+ AEI
Sbjct: 54  YVWLMRGTPLLLQLIFVF---YGLPLV--------GLTLGRFDAALFAFILNYTAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL ++ +GQ E+A  L LT+ +  R ++ PQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGLQSIDKGQYESAKVLRLTYWQTIRKIVTPQVVKIVLPSIGNEVINLVKDSSLVYVI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  DL+  G    ++    +  +++   +YL ++ ++   + +L    +
Sbjct: 163 GIGDLLRAGNVATSRD-VTLVPLVMVGVVYLVMTAVLTFILRKLEQYYS 210



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 37/100 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G +VG   +S  +L+  I R YV + R  P L+ + F+
Sbjct: 11  LLDGAKMTLQIFCWTLIGSLPLGLIVGLALISRFRLLKAILRFYVWLMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  V           F   LN              + 
Sbjct: 71  FYGLPLVGLTLGRFDAALFAFILNYTAYFAEIFRGGLQSI 110


>gi|157368268|ref|YP_001476257.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320032|gb|ABV39129.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 246

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 11/227 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                ++P   +   A     S + G+  ++  T L        G A  LL         
Sbjct: 12  YLLWGTWPDGPLGGAALTLAISLMAGVASAIIGTLLGVALAMSRGVAAGLLAALLGFFRA 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+ A
Sbjct: 72  IPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGIAA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQ +A ++LGLT  +  R+++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  
Sbjct: 122 IGPGQWQAGLSLGLTRWQTLRMIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTF 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   + N++    +E+ L    +Y    + + L  N +N + + + +
Sbjct: 182 LATQVNNRSMVYPMEVFLFIALVYFVFCLALDLLANAVNRRFSPQTR 228


>gi|256847978|ref|ZP_05553422.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256715038|gb|EEU30015.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 215

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 19/231 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L +   +         +T++      + S  LGI+ SL      R           +L
Sbjct: 1   MSLKYVFEILPSLFQGAGMTLELFFLTLIGSLPLGIICSLGLVSKIRPLKW-------VL 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               +L+ G P L+ +   +       ++ Q            F +  +A     AA+ A
Sbjct: 54  EFYVWLMRGTPLLLQLIFVFYGLPIVGIVFQ-----------RFDAALVAFILNYAAYFA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL ++  GQ E A  LGL++ +  R +++PQ ++ +IP + ++ +NL+K+SSL  
Sbjct: 103 EIFRGGLQSIDEGQYEGARVLGLSYWQTVRKIVIPQVVKIVIPSIGNEVVNLVKDSSLVY 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +G  DL+  G     +    +  +++   IYL +  +    ++++  + +
Sbjct: 163 VIGLGDLLRAGNVATARD-VTLVPLVLVGIIYLLMVGICTYILHKVEQRYS 212



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L F  +I +  +G +   G +S  + + W+   YV + R  P L+ + F+
Sbjct: 13  LFQGAGMTLELFFLTLIGSLPLGIICSLGLVSKIRPLKWVLEFYVWLMRGTPLLLQLIFV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  V  +            LN              + 
Sbjct: 73  FYGLPIVGIVFQRFDAALVAFILNYAAYFAEIFRGGLQSI 112


>gi|301325869|ref|ZP_07219302.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
 gi|300847383|gb|EFK75143.1| ABC transporter, permease protein [Escherichia coli MS 78-1]
          Length = 222

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A
Sbjct: 58  TPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 YSQLLYGRTYDVM-VFGASGIIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|229590087|ref|YP_002872206.1| putative ABC-type amino-acid transporter permease [Pseudomonas
           fluorescens SBW25]
 gi|229361953|emb|CAY48853.1| putative ABC-type amino-acid transporter permease protein
           [Pseudomonas fluorescens SBW25]
          Length = 220

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 18/237 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + +    L       +   +    ++  +A   +F  ++GIV  L        + +   +
Sbjct: 1   MYESPSWLHELWIARDTLWAGFQASVYVSALAIIFGTLIGIVAGLVL-----TYGKFWMR 55

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A   LY+       +  LVL                +           F +  + L+ + 
Sbjct: 56  APFRLYVDLIRGTPVFVLVL-------------ACFYMLPALGWQISAFQAGAVGLTLFC 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            + ++EIVR  L A+PRGQ+EA  A+GLT  ++   VLLPQA+R I+P   +    ++K 
Sbjct: 103 GSHVSEIVRGALQAIPRGQLEAGKAIGLTFYQSLGYVLLPQALRQILPTWVNSSTEIVKA 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S+L   +G A+L+     +I +T   +E  L   F++  ++  I LF   +  ++AL
Sbjct: 163 STLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFVINYAIELFGRYIEKRVAL 219



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 33/83 (39%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  GF  + +++   +I  T+IG + G         +    R+YV++ R  P  V++ 
Sbjct: 16  DTLWAGFQASVYVSALAIIFGTLIGIVAGLVLTYGKFWMRAPFRLYVDLIRGTPVFVLVL 75

Query: 147 FLYKSVLSVLPIPDHSIVLPFGM 169
             +  + ++            G+
Sbjct: 76  ACFYMLPALGWQISAFQAGAVGL 98


>gi|209965981|ref|YP_002298896.1| amino acid ABC transporter, permease protein [Rhodospirillum
           centenum SW]
 gi|209959447|gb|ACJ00084.1| amino acid ABC transporter, permease protein [Rhodospirillum
           centenum SW]
          Length = 236

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 87/214 (40%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V SF  G+VL   A   +R       + +  +Y +         ++ +      
Sbjct: 22  VTVAVAVLSFAGGLVLGSLAAA-ARLGGNALLRGVAEVYTTVIRGVPALLVIWLLFFGGS 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F   V G F + GG      F     A++  + A+ AE++R  + AVP GQ EAA ALG
Sbjct: 81  GFVSWVAGAFGY-GGRIELSAFAVGVAAVATVSGAYAAEVIRGAVQAVPSGQTEAARALG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +++PQA+R  +P L + +   LK+++L      A+L+ V       T Q  
Sbjct: 140 MHRGLILRRIVVPQALRYALPGLGNVWQMTLKDTALVSVTALAELMRVSYVASGATRQPF 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L    IY+ L+            +     ++
Sbjct: 200 LFYLTAAAIYMVLTTASNAAFQWAERRAERGVRR 233



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 33/74 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   IL G   T  +A        ++G+L  A RL  N L+  +  VY  V R +P L+V
Sbjct: 12  WGDEILGGAGVTVAVAVLSFAGGLVLGSLAAAARLGGNALLRGVAEVYTTVIRGVPALLV 71

Query: 145 IFFLYKSVLSVLPI 158
           I+ L+      +  
Sbjct: 72  IWLLFFGGSGFVSW 85


>gi|258623968|ref|ZP_05718921.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|262173969|ref|ZP_06041646.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus
           MB-451]
 gi|258583762|gb|EEW08558.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|261891327|gb|EEY37314.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus
           MB-451]
          Length = 222

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLLMT-ISLVMRTPIVHWFSRALITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +     AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMFALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKVATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  +    YL+++  + L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGVAGAFYLAVNGALTLLFRQIEKK 215



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 40/113 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G   +  L  + ++   I+  L+    +    +V W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLGTSLQLTAASLLVGCILSLLMTISLVMRTPIVHWFSRALITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I +  + +           +    T   + ++F  +F
Sbjct: 62  LVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMFALALNTAAYSTQLFKGAF 114


>gi|238758026|ref|ZP_04619207.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia aldovae ATCC 35236]
 gi|238703780|gb|EEP96316.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia aldovae ATCC 35236]
          Length = 246

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQAAPFGNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRLLSGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+ + +      +     QF           F+S
Sbjct: 65  GTCYVELFRNVPLIVQFFTWYLVIPELLPVDIGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQAAPFG----------NTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            R   N+L++ I   YVE+FRN+P +V  F  Y  +  +LP
Sbjct: 53  LRTVPNRLLSGIGTCYVELFRNVPLIVQFFTWYLVIPELLP 93


>gi|193077846|gb|ABO12723.2| Amino acid ABC transporter permease protein [Acinetobacter
           baumannii ATCC 17978]
          Length = 237

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 88/220 (40%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G +L++    L+R       +    +++ T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFLLAVPL-SLARVSENIWLRGP--VWLFTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + +   +  +          +A +  T A+  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYIHEHQTLD-AFFREGINCTILAFALNTGAYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFSAFGIAAVLYAVLAFILIWIFRKLEKR 227


>gi|172064905|ref|YP_001815617.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171997147|gb|ACB68064.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 248

 Score =  125 bits (315), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S V P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFVWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    IYL L+ ++   +  L  +++
Sbjct: 197 VFVCAALIYLGLNFIVVRLLGALEWRLS 224


>gi|322516947|ref|ZP_08069840.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
 gi|322124492|gb|EFX95983.1| polar amino acid uptake ABC superfamily ATP binding cassette
           transporter, membrane protein [Streptococcus
           vestibularis ATCC 49124]
          Length = 213

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T+     + V S  LGIVL+            K    L  LY+
Sbjct: 1   MSYVLEVLPALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQ-----IKFKPLNWLLTLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                 V     +  +A +   AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYYV-----------LPSVGIVFDRLPAAILAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+    T  N+    +  + +   IYL L  ++ +    +  K 
Sbjct: 163 GVGDLLLESRTAANRDA-TLAPMFVAGAIYLVLVGVVTVASKHIEKKF 209



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T  + F  ++ +  +G ++        K + W+  +YV + R  P L+ + F
Sbjct: 10  ALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQIKFKPLNWLLTLYVWIMRGTPLLLQLIF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  + SV  + D          LN              A 
Sbjct: 70  VYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAI 110


>gi|329939956|ref|ZP_08289238.1| glutamate uptake system [Streptomyces griseoaurantiacus M045]
 gi|329300782|gb|EGG44678.1| glutamate uptake system [Streptomyces griseoaurantiacus M045]
          Length = 308

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 102/237 (43%), Gaps = 16/237 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         L     T+   A   V +  LG +  +   RLS H   +       
Sbjct: 50  WKPFTLSTTWTTYLLPGLGETLKAAALSMVIALPLGALFGIA--RLSDHRWVRVPAG--- 104

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             +       +P L+++    Q++              S+ S    ++   L  Y A+ +
Sbjct: 105 --VIVEFFRSIPVLLMMIFANQVYVQS--------TDISSESRPLYAVVTGLVLYNASVL 154

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL- 340
           AEIVR+G++++P+GQ EAA A+GL   +    +LLPQA+  ++P + SQ + ++K+++L 
Sbjct: 155 AEIVRAGILSLPKGQSEAAHAIGLRKSQTMTSILLPQAVTVMLPAIVSQLVVIVKDTALG 214

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              + F +L+S   T        I   ++   IY+ L++ +  F   L  K+   ++
Sbjct: 215 GAVLNFTELLSARKTEAAFYANVIPSFVVVGLIYILLNLALTTFAGWLERKLRRSKR 271



 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 40/80 (50%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             P+T  +++ T +L G   T   A   M+ A  +G L G  RLS ++ V     V VE 
Sbjct: 50  WKPFTLSTTWTTYLLPGLGETLKAAALSMVIALPLGALFGIARLSDHRWVRVPAGVIVEF 109

Query: 136 FRNIPPLVVIFFLYKSVLSV 155
           FR+IP L+++ F  +  +  
Sbjct: 110 FRSIPVLLMMIFANQVYVQS 129


>gi|329295703|ref|ZP_08253039.1| polar amino acid ABC transporter, inner membrane subunit [Plautia
           stali symbiont]
          Length = 257

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 8/179 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K+    PL +IS   +  +    ++   + + F  P L              F +  +AL
Sbjct: 44  KSSPLAPLRWISHCYVEFIRNTPVLLQIFIIFFGLPSL--------GITMSAFTAGVLAL 95

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
                A+++E  R+G+ +V +GQ+EAA  LG+   +    V+LPQA R++ P + +  + 
Sbjct: 96  GINVGAYLSETFRAGIQSVAKGQLEAAYILGIPRHQIFLSVVLPQAARAVWPAIINNLIQ 155

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           LL  +SL  A+   +L      I  +T   I+   +   +YL LS + +        ++
Sbjct: 156 LLLGTSLLSAIALPELTGTATVINARTLLYIQTFSVVALVYLVLSNLFSWLGTVAGRRL 214



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 8/166 (4%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + +   YA   L     T  +       A  +G L    + S    + WI   YVE  
Sbjct: 3   YQWLTLWRYADTFLETAWLTLQVTLLAFALAVALGLLAALAKSSPLAPLRWISHCYVEFI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFS 193
           RN P L+ IF ++  + S+             + +N       T      +        +
Sbjct: 63  RNTPVLLQIFIIFFGLPSLGITMSAFTAGVLALGINVGAYLSETFRAGIQSVAKGQLEAA 122

Query: 194 FVLG-----IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           ++LG     I LS+   + +R         L  L + T L+  +  
Sbjct: 123 YILGIPRHQIFLSVVLPQAARAVWPAIINNLIQLLLGTSLLSAIAL 168


>gi|33592599|ref|NP_880243.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|33601144|ref|NP_888704.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
 gi|33572245|emb|CAE41797.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella pertussis Tohama I]
 gi|33575579|emb|CAE32657.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella bronchiseptica RB50]
          Length = 213

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               +A   +Y+  F   G   LV +   +  +F  P+             P  +   + 
Sbjct: 44  SPWLRAPAAVYVEVF--RGTSALVQL---FWFYFVLPMF--------GMKLPALLVGIVV 90

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L     A+ AE+VR  ++AVP GQ EAA+AL LT  +    ++LPQA+ +++PP  +  +
Sbjct: 91  LGANAGAYGAEVVRGAILAVPAGQREAAVALNLTRARTIWRIILPQAVPAMLPPTGNLLI 150

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLKN++L   +   DL   G  + ++T +  EI  + + +Y +++++I   +  L  + 
Sbjct: 151 ELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLVLLLYFAVALVITGGIRMLERRF 210

Query: 393 ALK 395
            ++
Sbjct: 211 KVR 213


>gi|330833721|ref|YP_004402546.1| polar amino acid ABC transporter inner membrane subunit
           [Streptococcus suis ST3]
 gi|329307944|gb|AEB82360.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis ST3]
          Length = 173

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 1/159 (0%)

Query: 238 IALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           +   Y +      L Q +         P  +    A +   AA+++E +R+ + AV  G+
Sbjct: 1   MLTYYGIPLVLRGLNQEYGLDWNINAIPAAVFAITAFAFNEAAYMSESIRAAIQAVSPGE 60

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA +LG+T  +  R +++P A     P L +  + L K +SLA + G  ++ +     
Sbjct: 61  IEAARSLGMTSGQVYRRIIIPNAAVIATPSLINTLIGLTKGTSLAFSAGIVEVYAQAQIQ 120

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                +  E  +    +Y +LS++I  F   L  K+A++
Sbjct: 121 GGADYRYFERYISVSLVYWALSVLIESFGRFLENKMAIQ 159


>gi|158423074|ref|YP_001524366.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158329963|dbj|BAF87448.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 213

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 14/213 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +FVLG V  L A  L R       + +   YIS F   G P L+ + + Y  
Sbjct: 15  WTVILSAIAFVLGGVGGL-AVALLRTSGVPLLERVTAGYISLF--QGTPLLMQLFVVYY- 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                + ++ +  + + +A++ EI R  + AVPRGQ EA+ AL 
Sbjct: 71  ----------GLALVGIRLNPWAAVSVGFTLHASAYLGEIWRGSIEAVPRGQTEASHALS 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L +    R V+LPQA+R  +P      + L+K +SLA  VGF +L   G  + NQ  Q +
Sbjct: 121 LGYVSRMRDVVLPQAIRISLPATIGFLVQLIKGTSLASIVGFTELARAGNIVSNQIFQPL 180

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  I   +Y  +   ++LF   L  + A   +
Sbjct: 181 LVFGIVGILYFLMCWPLSLFGAHLERRFATPAR 213



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+    +   + G  V   R S   L+  +   Y+ +F+  P L+ +F +
Sbjct: 9   LLQGLKWTVILSAIAFVLGGVGGLAVALLRTSGVPLLERVTAGYISLFQGTPLLMQLFVV 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  V    +    +  G  L+              A
Sbjct: 69  YYGLALVGIRLNPWAAVSVGFTLHASAYLGEIWRGSIEA 107


>gi|312961373|ref|ZP_07775878.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311285031|gb|EFQ63607.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 220

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 105/224 (46%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +    ++ V S  +G V+ L     +     +  +    +Y++  ++   
Sbjct: 11  WRDFDTLLAGLGLGLQLAVLSIAIGCVIGLL-MAFAMLSRHRALRVFASVYVT--VVRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI L Y           F          +  S  I LS Y  A++ E+ R+GL+ +
Sbjct: 68  PILVLILLIY-----------FALPSLGIRLDKIPSFIITLSLYAGAYLTEVFRAGLLNI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G  EA +A+GL   +    + +P  +R+++P L++ +++L K++SLA A+   +L   
Sbjct: 117 PKGLREAGLAIGLGEWRIRAYITVPVMLRNVLPALSNNFISLFKDTSLAAAIAVPELTYY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  L+   +Y++   +IA+ +  L  ++A++ 
Sbjct: 177 ARKINVESYRVIETWLVTTALYVAACYLIAMLLRYLEQRLAIRR 220



 Score = 36.8 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            +    +IG L+    LS ++ +     VYV V RN P LV+I  +Y ++ S+    D  
Sbjct: 31  SIAIGCVIGLLMAFAMLSRHRALRVFASVYVTVVRNTPILVLILLIYFALPSLGIRLDKI 90

Query: 163 IVLPFGMFLN 172
                 + L 
Sbjct: 91  PSFIITLSLY 100


>gi|255023479|ref|ZP_05295465.1| L-cystine transport system permease protein TcyL [Listeria
           monocytogenes FSL J1-208]
          Length = 194

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 6/190 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +       L  +YIS F   G P +V + + +   +  P L     I  S + P   +
Sbjct: 2   RIYKIPVLDQLARVYISFF--RGTPIMVQLFIVF---YGIPALSSIVGIDLSQMDP-LYA 55

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
                +  +AA IAE++R+G+ +V  GQ EAA ++GL  R+    ++LPQA+   +P   
Sbjct: 56  AIATYALSSAATIAEVIRAGVNSVDAGQTEAAYSVGLNGRQTFLRIILPQALYQALPNFG 115

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  +  LK++SLA ++G  D+   G T+I  +  A+E+ +    IY   ++++      +
Sbjct: 116 NLVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKWI 175

Query: 389 NAKIALKEKK 398
             ++  +  +
Sbjct: 176 EKRVKKENTR 185


>gi|49081976|gb|AAT50388.1| PA0890 [synthetic construct]
          Length = 233

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  F +  ++  L F  L +            L + + L   R+S+             
Sbjct: 1   MIFDFSVIWDSLPLYFDGLLVTLKLLSISLLIGLLLAVPLALMRVSKQPLVNFP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFDAVRESALWPWLSNASFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEILAGSLKATPLGEIEAAKAMGMSRLKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+ +Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLVDITGAARTVYSQYYLPFEAFITAGLFYLCLTFILVRLFKLAERR 222


>gi|85059072|ref|YP_454774.1| arginine transporter permease subunit ArtQ [Sodalis glossinidius
           str. 'morsitans']
 gi|84779592|dbj|BAE74369.1| arginine ABC transporter permease component [Sodalis glossinidius
           str. 'morsitans']
          Length = 238

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRL---SRHFHEKTG-------KALPLLYISTFLIFGL-P 233
           T   + + + V+G++L++    L    R +   TG       + LP + +  F+ FG   
Sbjct: 13  TTLALALCALVIGLILAMGFAALESARRRWLALTGTGLVTLLRGLPEILVVLFIYFGASQ 72

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +A    L      +     I    VSP F+   IAL+   AA+ ++ +R  L A+ 
Sbjct: 73  LLVTLADGITLQLGSLRIPLALPIDNFDVSP-FLCGVIALALLYAAYASQTLRGALKAIA 131

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ E+  ALG+++      V+LPQ  R  +P L +Q+L LLK+++L   +   DL+   
Sbjct: 132 QGQWESGQALGMSNGATFFRVILPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQT 191

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I++ T Q     L+   +YL +++     +     +    +K+
Sbjct: 192 KSIVSFTQQPFTWYLLAAGVYLVITLFSQTVLRTCERRATRFDKR 236


>gi|318057583|ref|ZP_07976306.1| putative amino acid ABC transporter permease protein [Streptomyces
           sp. SA3_actG]
 gi|318076838|ref|ZP_07984170.1| putative amino acid ABC transporter permease protein [Streptomyces
           sp. SA3_actF]
          Length = 213

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 19/211 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             T     V   ++  VL L     SR         LP+  ++ F I   P LV +   Y
Sbjct: 21  FWTTLLATVLGSLVAAVLGLLVAMASR---GPAWVRLPVKAVTEF-IRSTPLLVQLVGVY 76

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L                          I L  + A ++ E  R+G+ AVP+GQ EAA A
Sbjct: 77  TLFGSV---------------DPLTLGIIVLGVHYATYMGEAYRAGIDAVPKGQWEAARA 121

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L L+  +    V+LPQA+R+++P L +  + + K +     +   D+V       +    
Sbjct: 122 LSLSPGRTWGAVVLPQAVRNVLPALGNYAIAMFKETPYLAVITVGDMVLHAREYGSAHFA 181

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             E+  +   I+L  S   +L M +L  ++ 
Sbjct: 182 YAEVFTLAGLIFLVASYPTSLLMRKLEKRLG 212



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T      G + A ++G LV          V    +   E  R+ P LV +  +
Sbjct: 17  LLDGFWTTLLATVLGSLVAAVLGLLVAMASRGPAW-VRLPVKAVTEFIRSTPLLVQLVGV 75

Query: 149 YKSVLSVLP 157
           Y    SV P
Sbjct: 76  YTLFGSVDP 84


>gi|326317639|ref|YP_004235311.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323374475|gb|ADX46744.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 272

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 11/222 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L      +  N +I V +  LG  + L    LS        +     ++  F     
Sbjct: 55  WQWLPALLRGLWVNIEISVLAVALGTAVGLVVGALS-LSPVHAVRVAARCHVQVF--RNA 111

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI     +   +  L Q+ F       P+++ + + L+  T+A +AEI R  + ++
Sbjct: 112 PILVLIYFTTYVFPFEVHLVQWTF-----PFPDWVKVVLGLALPTSANVAEIFRGAIQSI 166

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q EAA +L     +  RLV+LPQ +R ++PP  + Y ++  ++SLA  VG  D+V  
Sbjct: 167 PAAQWEAAQSLAFRRSQIFRLVVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDT 226

Query: 353 GGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                N   +T   I +    + ++ +    IA     L  +
Sbjct: 227 AQIASNTVARTDFTILVYFTLLALFFAYCYPIARATRALEKR 268



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 38/87 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +  A+L G      ++   +   T +G +VGA  LS    V    R +V+VFRN P L
Sbjct: 55  WQWLPALLRGLWVNIEISVLAVALGTAVGLVVGALSLSPVHAVRVAARCHVQVFRNAPIL 114

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V+I+F        + +   +   P  +
Sbjct: 115 VLIYFTTYVFPFEVHLVQWTFPFPDWV 141


>gi|50119203|ref|YP_048370.1| L-amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609729|emb|CAG73163.1| L-amino acid ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 364

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 72/335 (21%), Positives = 132/335 (39%), Gaps = 54/335 (16%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G     G+ P T       A+ +G ++         I    + T+   GR  
Sbjct: 74  WVFIHARFG-HFMYGLYPATEVWRINFALAIGLLS---------ILPMFLKTIPYRGR-- 121

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+    PL+  + LY                     +        T
Sbjct: 122 -----------YIAVWTVAYPLIAWWLLYGG-------------FGGLSRVETYQWGGLT 157

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 158 LTLIIAAVGIAGALPLGILLAL-----GRRSTLPIVRMLSVVFIEFWRGVPLITVLFMS- 211

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 212 ---------SVMLPLFLTEGTTIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 262

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + +   LV+LPQA++ +IP L +  ++L K++SL + +G  DL S         
Sbjct: 263 ESLGLGYWRMQGLVILPQALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFSSIQQATVDP 322

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G + E  +    +Y      ++ +   L  + 
Sbjct: 323 TWLGMSTEGYVFAAMVYWIFCFSMSRYSQHLENRF 357


>gi|205353468|ref|YP_002227269.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205273249|emb|CAR38212.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628560|gb|EGE34903.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 228

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGLVG-AGAKLSQNRVTGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +   +           ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            TH +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +    +LS N++   I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|160901202|ref|YP_001566784.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160366786|gb|ABX38399.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 273

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 11/222 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L      +  N +I V +  +G V  L    LS        +     Y+  F     
Sbjct: 56  WKWLPALLRGLLVNIEISVLAVAIGTVAGLVLGALS-LSPTPAVRTGVRWYVQLF--RNA 112

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI     +        +   +G +   P+++ + + L+  T+A +AEI R  + ++
Sbjct: 113 PILVLIYFTTYVF-----PFELKLVGWTFPFPDWVKVVLGLALPTSANVAEIFRGAIQSI 167

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q EAA +L     +  RL++LPQ +R ++PP  + Y ++  ++SLA  VG  D+V  
Sbjct: 168 PSAQWEAAQSLAFRRSEIFRLIVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDT 227

Query: 353 GGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                N   +T   I +    + ++ +    IA     L  +
Sbjct: 228 AQIASNTVARTDFTILVYFTLLALFFAYCYPIARATRALERR 269



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 39/87 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +  A+L G +    ++   +   T+ G ++GA  LS    V    R YV++FRN P L
Sbjct: 56  WKWLPALLRGLLVNIEISVLAVAIGTVAGLVLGALSLSPTPAVRTGVRWYVQLFRNAPIL 115

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V+I+F        L +   +   P  +
Sbjct: 116 VLIYFTTYVFPFELKLVGWTFPFPDWV 142


>gi|331084133|ref|ZP_08333239.1| hypothetical protein HMPREF0992_02163 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330401988|gb|EGG81561.1| hypothetical protein HMPREF0992_02163 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 215

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 12/209 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            IF  + VL + L L      R    K    +   YIS  ++ G P ++ + + Y   + 
Sbjct: 19  LIFFMTLVLSLPLGLVMY-FGRVSKIKLVSGIVKFYIS--VMRGTPLMLQLLVWYYAPY- 74

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                     G +    +  ++ +  S   AA+ AEI RSG+ A+PRGQ EAA  LG + 
Sbjct: 75  -------YLWGMNIGGYKLTAILLGCSLNYAAYFAEIYRSGIEAIPRGQYEAAAILGYSG 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           ++    ++LPQ +++++P +T++ + L+K++SL  ++ + ++ +V   I       I   
Sbjct: 128 QQTFFRIILPQMIKNVLPAVTNEVITLVKDTSLVYSLSYVEMFAVAKQIAAA-QTTIVPF 186

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I    Y   + ++A  M     K+    
Sbjct: 187 FIAGAFYYIFNYIVAKVMEMFEKKMNYYR 215



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               +  GF  T  + F  ++ +  +G ++  GR+S  KLV+ I + Y+ V R  P ++ 
Sbjct: 6   IMREMTAGFGQTCLIFFMTLVLSLPLGLVMYFGRVSKIKLVSGIVKFYISVMRGTPLMLQ 65

Query: 145 IFFLYKSVLSVLPI 158
           +   Y +   +  +
Sbjct: 66  LLVWYYAPYYLWGM 79


>gi|317049370|ref|YP_004117018.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950987|gb|ADU70462.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 221

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 18/214 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   + S + G +++    R S  +       L +L + + L   LP LV+I L Y 
Sbjct: 22  QLCAVAALCSLLWGALMAWMLMRASPFW-------LRILNLYSGLTLALPLLVVIYLLYF 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +  +  +      +G            +AL+ Y A +IA+++R+ + A+P+GQ EA   L
Sbjct: 75  VLPEYDITLSSPVVG-----------VLALTLYYAPYIAQVIRAAIGALPKGQWEACRVL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V+LPQ +  ++ PL    + L+K+S+L   V   + +      I+ T   
Sbjct: 124 GLSRSEQLRDVVLPQTLPQMLSPLVGLTIGLIKDSALLSIVSVQEFMYAAKQAISATYAP 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +EI L     Y  L+ +I      L + +    +
Sbjct: 184 LEIYLTVALCYWLLNSVIDWLARCLESLMTRYRR 217


>gi|253987651|ref|YP_003039007.1| amino acid ABC transporter permease [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779101|emb|CAQ82261.1| similar to amino acid permease component of abc transporter
           [Photorhabdus asymbiotica]
          Length = 245

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 18/225 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                  +T+  +    V S +LG +L+      +R    K  +     Y + F     P
Sbjct: 18  WLWQGFLITLWISFCTVVASTLLGFLLA-----AARDSQLKILRWPVTAYTTLF--RNTP 70

Query: 234 TLVLIALKYQ-----------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            LV +   Y            L  + P       +  S  S EF++ +I L+ Y+A F+A
Sbjct: 71  LLVQLFFWYFASGQILPQDVMLWLNTPHEINLLGLPLSWPSFEFLAGFIGLTLYSAPFVA 130

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+G+  + RGQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KNSSL +
Sbjct: 131 EELRAGIQGIGRGQKYAAHALGLTGWQAMRYVVLPQALKIAMPPLLGQYMNIVKNSSLTM 190

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           A+G A+L      +  +T +  E   +   +Y++   ++  +   
Sbjct: 191 AIGVAELSYASRQVETETLKTFEAFGVATVLYIATIAVMEGWGQW 235



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 44/83 (53%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +  +     Y   +  GF+ T W++F  ++ +T++G L+ A R S  K++ W    Y  +
Sbjct: 6   VTEHLLAPQYLEWLWQGFLITLWISFCTVVASTLLGFLLAAARDSQLKILRWPVTAYTTL 65

Query: 136 FRNIPPLVVIFFLYKSVLSVLPI 158
           FRN P LV +FF Y +   +LP 
Sbjct: 66  FRNTPLLVQLFFWYFASGQILPQ 88


>gi|218512395|ref|ZP_03509235.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 173

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 13/179 (7%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL   YI  F   G    V +   + ++F  P         G T++P   +  +AL   
Sbjct: 2   RALATAYIEFF--RGTSIFVQL---FWVYFVLP-------FAGLTLTP-LQAGVLALGLN 48

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ AE+VR  + AV R Q EA +AL L+  +  R V+LPQA+  ++P   +  + LLK
Sbjct: 49  VGAYGAEVVRGAVKAVGREQSEACVALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLK 108

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +++   +   D+      +  QTG  +      + +Y  +++ I+  M RL  ++A  
Sbjct: 109 GTAVVSLISLTDMTFQAQVVRAQTGNTLVPFATILILYFLMALAISAAMRRLERRMARG 167


>gi|237653224|ref|YP_002889538.1| polar amino acid ABC transporter inner membrane subunit [Thauera
           sp. MZ1T]
 gi|237624471|gb|ACR01161.1| polar amino acid ABC transporter, inner membrane subunit [Thauera
           sp. MZ1T]
          Length = 244

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 10/222 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                   +T+       +F F + I L++     +R                T+   G 
Sbjct: 14  PEFWRGLWMTVQLTGLALLFGFFVAIPLAVMRLSPNRLVSAPVAA-------YTYFFRGT 66

Query: 233 PTLVLIALKYQLHFDKPVL---GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           P LV + L Y        +    +      S     +     A    T A+  EI+   +
Sbjct: 67  PMLVQLLLVYYGASQWEWMRAAWEAGHPLWSLFREPYFCALFAFGLNTCAYTVEILAGSM 126

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
              P G++EAA A+G+T  KA + +++P A+R +IP  +++ + +L+ S++A AV   DL
Sbjct: 127 RNTPHGELEAAKAMGMTRLKALQRIVIPSALRRMIPSYSNEVILMLQGSAIASAVTLVDL 186

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++     E  +    IYL+L+  +         +
Sbjct: 187 TGAARNVYSRHFAPFESFVFVGLIYLALTFALVGLFKLAEHR 228



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 2/104 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T  L    ++    +   +   RLS N+LV+     Y   FR  P LV +  +
Sbjct: 16  FWRGLWMTVQLTGLALLFGFFVAIPLAVMRLSPNRLVSAPVAAYTYFFRGTPMLVQLLLV 75

Query: 149 YKS--VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y        +     +    + +F      +     ++T A   
Sbjct: 76  YYGASQWEWMRAAWEAGHPLWSLFREPYFCALFAFGLNTCAYTV 119


>gi|197294964|ref|YP_002153505.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944443|emb|CAR57045.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 248

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPRWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFMWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPIGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    IYL L+ ++   +  L  +++
Sbjct: 197 VFVCAAVIYLGLNFIVVRLLGALEWRLS 224


>gi|148976102|ref|ZP_01812845.1| arginine transporter permease subunit ArtM [Vibrionales bacterium
           SWAT-3]
 gi|145964497|gb|EDK29751.1| arginine transporter permease subunit ArtM [Vibrionales bacterium
           SWAT-3]
          Length = 222

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + LS     + T+ ++   S ++G +LSL  T        +      +      L  
Sbjct: 1   MNQQYLSQMLEGLATSLQLTGASLLVGCILSLLMTV---TLILRLPAIHWVTRGIITLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + + +F+      P F    +AL+  TAA+   + R    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDWIRE-SFMWTWLSQPWF-CAMLALALNTAAYSTLLFRGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EA  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPAGQWEACRALGMDKIATL-KVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINGQTYDTLTVFGIAGAFYLAVNGILTLIFRQVEKK 215


>gi|281415788|ref|ZP_06247530.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
          Length = 300

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 12/236 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
              +    G    N  L     T+ +     V S V G+V         R       + L
Sbjct: 56  RRWLAAVDGDAWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFL-----RLAPVGPVRWL 110

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             + +  F    +P LV++   YQL       G      G      + ++  AL+ Y  +
Sbjct: 111 AAVVVEFF--RAVPVLVMMVFFYQLFAQVARSGAIQPQDG-----PYYAVIAALTLYNGS 163

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            IAE+VRSG+ ++PRGQ EAA A+G+T  ++ RLV +PQA+ +++P L SQ++ +LK+S+
Sbjct: 164 VIAELVRSGVRSLPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSA 223

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +GF +L+     + +  G  ++ +++   I++ ++ ++     RL+ +++ +
Sbjct: 224 LGYLIGFFELLHYARQLGSGNGNILQSLVVAAMIFIVINFLLTWAATRLSRRLSSR 279



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 36/83 (43%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +  +      ++    L G   T   A   ++ + + G + G  RL+    V W+  V 
Sbjct: 55  GRRWLAAVDGDAWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFLRLAPVGPVRWLAAVV 114

Query: 133 VEVFRNIPPLVVIFFLYKSVLSV 155
           VE FR +P LV++ F Y+    V
Sbjct: 115 VEFFRAVPVLVMMVFFYQLFAQV 137


>gi|271502696|ref|YP_003335722.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270346251|gb|ACZ79016.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 252

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 106/224 (47%), Gaps = 11/224 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F      ++P   +   A   V S + G++ ++  T L        G A  LL +     
Sbjct: 10  FSYLMWGTYPDGPLGGAALTLVLSLMAGLISAVLGTVLGVALAMLRGWAGGLLAVVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHGVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LGL   +    ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 MAIGLGQWQAGMSLGLGRWQTLWHIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   + N++     E+ L    +Y    + + L    ++ + 
Sbjct: 180 TFLATQVNNRSMVYPTEVFLFIALVYFIFCLTLDLLAQGVSRRF 223


>gi|239624577|ref|ZP_04667608.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47_FAA]
 gi|239520963|gb|EEQ60829.1| polar amino acid ABC transporter [Clostridiales bacterium
           1_7_47FAA]
          Length = 219

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 11/226 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            G     + +      M T+ +IF+ + V  + L L      R    K  +A+  +YIS 
Sbjct: 1   MGKMTIQQMIIQLAGGMGTSIQIFMVTLVFSLPLGLVV-AFGRMSKNKYLQAIVKVYIS- 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G P ++ + + Y   +       F    GS       + +I      AA+ AEI R
Sbjct: 59  -IMRGTPLMLQLMVVYFGPY-----YLFGLKMGSGYR--LWAAFIGFVINYAAYFAEIYR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ ++P GQ EAA  LG +  +    ++LPQ ++ I+P +T++ + L+K++SLA  +  
Sbjct: 111 SGIQSMPVGQYEAAQILGYSRFQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFTLSV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A++ S+   +       I   +     Y   ++++A+ M  +  K+
Sbjct: 171 AEMFSIAKGLAASQTNMIP-FVAAGLFYYIFNLVVAVGMEWVEKKL 215



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 30/60 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   +  +    ++ +  +G +V  GR+S NK +  I +VY+ + R  P ++ +  +Y  
Sbjct: 16  GMGTSIQIFMVTLVFSLPLGLVVAFGRMSKNKYLQAIVKVYISIMRGTPLMLQLMVVYFG 75


>gi|16262492|ref|NP_435285.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|307300764|ref|ZP_07580539.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|14523097|gb|AAK64697.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306904298|gb|EFN34883.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 222

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 14/227 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F             +      ++   + ++G+V+S+F     +       + +   Y
Sbjct: 1   MYEFNFAPVLASFDQLLVGAWLTVRLSCAAMLIGLVVSVF-CAWGKTAGPAILRHVIDGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   +I   P LV I   +   F  P L       G  +SP   +  +AL     A+  E
Sbjct: 60  IE--IIRNTPFLVQIFFIF---FGMPSL-------GLRLSPN-SAALLALVVNFGAYGTE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ +GQ+EA  ALGL+  +  R V++  A+R++ P LTSQ++ L+ N+S+   
Sbjct: 107 IIRAGIESIHKGQVEAGWALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +   DL + G  + + T  + E+ +    IYL+LS+  +     L  
Sbjct: 167 ISADDLAAAGNDLQSATFASFEVYIAVTLIYLALSVGFSALFYALEK 213



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  L+ + M+   ++      G+ +   ++  +   Y+E+ RN P LV IFF+
Sbjct: 16  LLVGAWLTVRLSCAAMLIGLVVSVFCAWGKTAGPAILRHVIDGYIEIIRNTPFLVQIFFI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + S+      +      + +N 
Sbjct: 76  FFGMPSLGLRLSPNSAALLALVVNF 100


>gi|22125090|ref|NP_668513.1| glutamate/aspartate inner membrane permease [Yersinia pestis KIM
           10]
 gi|45440930|ref|NP_992469.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51595453|ref|YP_069644.1| ABC glutamate/aspartate transporter, permease subunit gltK
           [Yersinia pseudotuberculosis IP 32953]
 gi|108808477|ref|YP_652393.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Antiqua]
 gi|108811262|ref|YP_647029.1| glutamate/aspartate transport system permease [Yersinia pestis
           Nepal516]
 gi|145599903|ref|YP_001163979.1| glutamate/aspartate transport system permease [Yersinia pestis
           Pestoides F]
 gi|149365486|ref|ZP_01887521.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CA88-4125]
 gi|153946873|ref|YP_001401884.1| glutamate/aspartate ABC transporter permease GltK [Yersinia
           pseudotuberculosis IP 31758]
 gi|162421571|ref|YP_001606325.1| glutamate/aspartate ABC transporter permease GltK [Yersinia pestis
           Angola]
 gi|165925298|ref|ZP_02221130.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937730|ref|ZP_02226292.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008308|ref|ZP_02229206.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212318|ref|ZP_02238353.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167398818|ref|ZP_02304342.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422495|ref|ZP_02314248.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167423767|ref|ZP_02315520.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468412|ref|ZP_02333116.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis FV-1]
 gi|170025233|ref|YP_001721738.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894484|ref|YP_001871596.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929694|ref|YP_002347569.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CO92]
 gi|229838160|ref|ZP_04458319.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229895952|ref|ZP_04511122.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Pestoides A]
 gi|229898729|ref|ZP_04513874.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901500|ref|ZP_04516622.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Nepal516]
 gi|270489686|ref|ZP_06206760.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504417|ref|YP_003568479.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Z176003]
 gi|21957945|gb|AAM84764.1|AE013722_3 glutamate/aspartate inner membrane permease [Yersinia pestis KIM
           10]
 gi|45435789|gb|AAS61346.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51588735|emb|CAH20346.1| ABC glutamate/aspartate transporter, permease subunit gltK
           [Yersinia pseudotuberculosis IP 32953]
 gi|108774910|gb|ABG17429.1| glutamate/aspartate transport system permease [Yersinia pestis
           Nepal516]
 gi|108780390|gb|ABG14448.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Antiqua]
 gi|115348305|emb|CAL21236.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CO92]
 gi|145211599|gb|ABP41006.1| glutamate/aspartate transport system permease [Yersinia pestis
           Pestoides F]
 gi|149291899|gb|EDM41973.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CA88-4125]
 gi|152958368|gb|ABS45829.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pseudotuberculosis IP 31758]
 gi|162354386|gb|ABX88334.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis Angola]
 gi|165914480|gb|EDR33095.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922905|gb|EDR40056.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992690|gb|EDR44991.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206249|gb|EDR50729.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958509|gb|EDR55530.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051322|gb|EDR62730.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057937|gb|EDR67683.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169751767|gb|ACA69285.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697510|gb|ACC88139.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681429|gb|EEO77523.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Nepal516]
 gi|229688277|gb|EEO80348.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694526|gb|EEO84573.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700875|gb|EEO88904.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Pestoides A]
 gi|270338190|gb|EFA48967.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294354876|gb|ADE65217.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Z176003]
 gi|320016183|gb|ADV99754.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 224

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V GI+       + R    K        Y
Sbjct: 1   MYEFDWSSIAPSLPYLLQGLIVTVKITLIAIVFGILWGTIL-AVMRLSPIKAISWFATAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNVFRSIP---LVMVLLWFYL--VVPGFLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E++L    +Y  +SI  ++ +N L  +
Sbjct: 175 LSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASMLVNYLKKR 222



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 39/76 (51%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S +     +L G + T  +    ++   + GT++   RLS  K ++W    YV VFR
Sbjct: 5   DWSSIAPSLPYLLQGLIVTVKITLIAIVFGILWGTILAVMRLSPIKAISWFATAYVNVFR 64

Query: 138 NIPPLVVIFFLYKSVL 153
           +IP ++V+ + Y  V 
Sbjct: 65  SIPLVMVLLWFYLVVP 80


>gi|296877228|ref|ZP_06901268.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431748|gb|EFH17555.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 228

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L    +LF   L + +  K  ++  ++Y++         L+L      
Sbjct: 18  PVTLLIMVVSILLSFFPALFL-ALGQIYKVKGVRSFSVIYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                     +I  S  T   +AEI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNSFFKSIGSHFNVFEINPIYYAFIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+R+A   ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTNRQAYIRIVFPQALRSALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   +Y+ +  +I    NRL  ++ L
Sbjct: 197 FESYLVIFILYIVICGVIQWGFNRLEKRLTL 227



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 35/92 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  +    ++ +      +  G++   K V     +Y+   R  PP+++I F
Sbjct: 12  ATLGGVPVTLLIMVVSILLSFFPALFLALGQIYKVKGVRSFSVIYLAFIRATPPILLILF 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            Y    S+L     SI   F +F  N      
Sbjct: 72  FYSLFPSLLNSFFKSIGSHFNVFEINPIYYAF 103


>gi|260578183|ref|ZP_05846103.1| glutamate transport system permease protein GluD [Corynebacterium
           jeikeium ATCC 43734]
 gi|258603722|gb|EEW16979.1| glutamate transport system permease protein GluD [Corynebacterium
           jeikeium ATCC 43734]
          Length = 318

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 15/237 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G       +     T+       V +  +G +L +      R       + +  
Sbjct: 59  WSFFLEGSTWTTYIIPGLISTIGAAVVSIVLAMAIGALLGV-----GRLSPSAPVRWICG 113

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +  F    +P LVL+   Y + F    L   +++G       F ++   L+ Y  + I
Sbjct: 114 IIVEFF--RSIPVLVLMLFAYAV-FSLLQLVPSSWLG-------FSAVVFGLTMYNGSVI 163

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +RSG+ ++PRGQ EAAIALGL+HR++  L+LLPQA+ +++P + SQ +  LK+S+L 
Sbjct: 164 AETLRSGIQSLPRGQREAAIALGLSHRQSINLILLPQAVAAMLPAIISQMVIALKDSALG 223

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +GF ++V  G  +    G  I  +L+   I + +++++A    R+  ++     +
Sbjct: 224 YMIGFVEVVRSGRQLGEYYGAMIPALLLIAVIMIVINMILAKLAERIEIQLRSGRAR 280



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+E+  FE  +    +   S++ T I+ G ++T   A   ++ A  IG L+G GRLS + 
Sbjct: 48  LNEKGQFESAKWSF-FLEGSTWTTYIIPGLISTIGAAVVSIVLAMAIGALLGVGRLSPSA 106

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            V WIC + VE FR+IP LV++ F Y     +  +P   +     +F
Sbjct: 107 PVRWICGIIVEFFRSIPVLVLMLFAYAVFSLLQLVPSSWLGFSAVVF 153


>gi|257876302|ref|ZP_05655955.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257810468|gb|EEV39288.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 214

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 109/233 (46%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  + + +  + +S   +T+   A   + S  LGI+L+       R           ++ 
Sbjct: 1   MFEYLVNVMPQLISGTGITVKLFALTLIGSIPLGILLAFVLASRLRILKL-------IVQ 53

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +L+ G P L+ +   +   +  P+L          V   F +  IA     AA+ AE
Sbjct: 54  VYVWLMRGTPLLLQLIFVF---YGLPIL--------GIVFDRFEAALIAFIINYAAYFAE 102

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+ ++P GQ EAA  L L+  +  + +++PQ ++  +P + ++ +NL+K++SL   
Sbjct: 103 IFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVKDTSLVYI 162

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G +D++ +G   + +    +  ++    IYL ++ +  L + ++  K+    
Sbjct: 163 LGLSDVMRIGKIAMERD-STLLPLVGVGLIYLVMTGVFTLLLKQIETKLDYYR 214



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L    +I +  +G L+     S  +++  I +VYV + R  P L+ + F+
Sbjct: 12  LISGTGITVKLFALTLIGSIPLGILLAFVLASRLRILKLIVQVYVWLMRGTPLLLQLIFV 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  + D          +N              + 
Sbjct: 72  FYGLPILGIVFDRFEAALIAFIINYAAYFAEIFRGGIQSI 111


>gi|237808337|ref|YP_002892777.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500598|gb|ACQ93191.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 228

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 7/211 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 SF+LG++ +   +  S+     +G       I T LI G+P LVL+ L +    
Sbjct: 21  LLSVALSFLLGLIGAAAKSSQSKLARLLSG-------IYTTLIRGVPDLVLMLLIFYGLQ 73

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                   +          F +  I +     A+  E  R   + VP+GQ+EA +A G +
Sbjct: 74  IVVNGITESLGIAQLNIDPFAAGVITIGFIYGAYFTETFRGAYLMVPKGQLEAGVAYGFS 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R +L PQ MR  +P + + +   LK ++L   +G +D+V         T Q    
Sbjct: 134 PWQAFRYILFPQLMRFALPGIANNWQVTLKATALVSIIGLSDVVKATQNAGKGTYQFFYF 193

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++   +YL  + +  L +  L  + ++  +
Sbjct: 194 TIVAAVVYLIFTTVSNLVLLWLERRYSMGVR 224


>gi|330819467|ref|YP_004348329.1| ABC transporter, permease protein [Burkholderia gladioli BSR3]
 gi|327371462|gb|AEA62817.1| ABC transporter, permease protein [Burkholderia gladioli BSR3]
          Length = 216

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 14/228 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +     GL   T        +     VLG  + L     +R       +    LY+ 
Sbjct: 1   MFSLSAFLAGLPLLTHAASMTLAVSAAGLVLGFFIGLAVCC-ARRAPWAAPRVAGTLYVR 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F    L   +L+           V                ++   A+S  +AA++AEI+
Sbjct: 60  FFRGVPLLVQLLLVFYLLPFVGINV-------------SPVVAAVSAVSLCSAAYVAEIL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G   +P GQ+EAA  LGL+       + +PQ MR  +P L ++ + L+K SSL   VG
Sbjct: 107 RGGFENLPPGQIEAARMLGLSAADRLWRIQVPQVMRLTLPSLANEMVLLIKASSLISVVG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A++      +   T Q +E       IY  L   +AL  +    ++ 
Sbjct: 167 VAEITRTAQNLAASTYQPLEAYAAAGLIYFILCGALALVAHGAERRLR 214


>gi|299769349|ref|YP_003731375.1| Histidine transport system permease protein hisM [Acinetobacter sp.
           DR1]
 gi|298699437|gb|ADI90002.1| Histidine transport system permease protein hisM [Acinetobacter sp.
           DR1]
          Length = 237

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 88/220 (40%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G VL++    L+R       +    +++ T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFVLAVPL-SLARVSENLWLRGP--VWLFTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + +   +  +          +A +  T A+  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYVHEHQTLD-AFFREGINCTILAFALNTGAYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFNAFGIAAVLYAMLAFILIWIFRKLEKR 227


>gi|260432482|ref|ZP_05786453.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416310|gb|EEX09569.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 432

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R L    L +         S  LGI L+L      R       K + +++I       L 
Sbjct: 220 RDLGGFMLNLMLGVTCVSLSLPLGIALAL-----GRQSDMPLIKWVCVIFIEFIRGVPLI 274

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           +    F+ + I ++ ++AA+IAE++R GL A+P
Sbjct: 275 TLLFVASVMLAYFFPP----------DSTVDLFLRVVIMITMFSAAYIAEVIRGGLAALP 324

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA +LGL + +A RL++LPQA++  IP + +  + L K+++L   +   DLV + 
Sbjct: 325 RGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDLVGMI 384

Query: 354 G----TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                      G   E++     ++  +   I+ +   L  ++A   +
Sbjct: 385 RGPILASTEWNGVYWELLGFAALLFFVVCYGISQYSQWLERRLATDHR 432


>gi|238750615|ref|ZP_04612115.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
 gi|238711263|gb|EEQ03481.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
          Length = 219

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 14/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     L +  L        T A + + + V G  + +    L    H   G+    +YI
Sbjct: 1   MADFFQLLSGWLPMLIDGAVTTASLSILAIVAGFFIGVVIY-LMESGHSGFGRGFARVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F   G P L  + L + L  +                P +++  +AL+  TAA+ ++I
Sbjct: 60  SLF--RGTPVLAQVLLCFYLPGEL-----------GLSLPGYLAAVMALTFNTAAYQSQI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG  A+  GQ+EAA   GL+ R+    + +PQ +R  +P L S+ ++++K S++   +
Sbjct: 107 LRSGFKAIAPGQLEAAAMCGLSSRQTLWHIQIPQVLRLTMPSLISELIDVIKASAVVSVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              DL+ VG  + + T + +E+ +     YL L+ ++AL  + +  +   + +
Sbjct: 167 AITDLMRVGQQLASATYRPLEVYVAIALSYLVLTSLLALLGSYVERRWHQESR 219



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 34/111 (30%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   S +   ++ G V T  L+   ++    IG ++       +       RVY+ +FR 
Sbjct: 5   FQLLSGWLPMLIDGAVTTASLSILAIVAGFFIGVVIYLMESGHSGFGRGFARVYISLFRG 64

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            P L  +   +     +       +     +  N        L     A  
Sbjct: 65  TPVLAQVLLCFYLPGELGLSLPGYLAAVMALTFNTAAYQSQILRSGFKAIA 115


>gi|259909118|ref|YP_002649474.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae
           Ep1/96]
 gi|224964740|emb|CAX56257.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae
           Ep1/96]
 gi|283479146|emb|CAY75062.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia pyrifoliae DSM 12163]
          Length = 245

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + V ++++ + +  F   L R    +   +L
Sbjct: 6   NWGIFLQEAPFGNTTYLGWLWSGFQVTIAVSVCAWIIALFVGSFFGIL-RTVPGRLLSSL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
              Y+  F    +P +V   + Y  +    P      F      + +F     + L  +T
Sbjct: 65  GTCYVELF--RNVPLIVQFFIWYLVVPELLPEDIGMWFKSEIDPNIQFFTCSVLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+PP+TS+ LNL+KN
Sbjct: 123 AARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y++++ +I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINTVIMLLMGLVERKVRL 239



 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   +  GF  T  ++    I A  +G+  G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTTYLGWLWSGFQVTIAVSVCAWIIALFVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R    +L++ +   YVE+FRN+P +V  F  Y  V  +LP 
Sbjct: 53  LRTVPGRLLSSLGTCYVELFRNVPLIVQFFIWYLVVPELLPE 94


>gi|121607189|ref|YP_994996.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121551829|gb|ABM55978.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 216

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 18/216 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+       + S +LG+V +           + +   + LL        G+P +
Sbjct: 16  LQGAKLTVLVTLGSLLISTLLGLVWAAMRVSGIGLLAKVSASVVNLL-------RGIPII 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+   Y           F             +  + L    +A+ AE  R+G+ AV +G
Sbjct: 69  VLLFFIY-----------FVMPDFGVSLTALQAGILGLGIAYSAYQAENFRAGIEAVDQG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA A+G++     R VLLPQA R  +P   +  + +LK+SS A  +   +L   G  
Sbjct: 118 QVEAAQAMGMSWWLTMRRVLLPQAFRITLPSYGNIMIMMLKDSSQASTITVTELALQGKL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I   T Q   +  +   +YL + + + L +     +
Sbjct: 178 IATSTFQNATVFSLVALLYLIMCVPLILLVRHFEKR 213



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +T++G +  A R+S   L+A +    V + R IP +V++FF+
Sbjct: 15  LLQGAKLTVLVTLGSLLISTLLGLVWAAMRVSGIGLLAKVSASVVNLLRGIPIIVLLFFI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +               G+ +               A
Sbjct: 75  YFVMPDFGVSLTALQAGILGLGIAYSAYQAENFRAGIEA 113


>gi|115360320|ref|YP_777457.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115285648|gb|ABI91123.1| amino acid ABC transporter membrane protein, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 218

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 14/197 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           +I   SFVL  VL L    L R    +        +I+  +I GLP 
Sbjct: 9   FLPILLKGAVVTIEITFCSFVLSTVLGLLL-ALMRVSDNRVLSNTAATFIN--VIRGLPI 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   + ++F  P L              F + +I L    + + AE  R+G+ A+  
Sbjct: 66  IVQL---FYIYFVLPDL--------GVQLSAFQAGFIGLGIAYSVYQAENFRAGIQAIDH 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA ++G+      R V+LPQA R  +PP  +  + +LK+SSLA  +  A++   G 
Sbjct: 115 GQIEAAQSIGMRGTMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQ 174

Query: 355 TIINQTGQAIEIILIWM 371
            I + T Q + +  +  
Sbjct: 175 LIASSTFQNMTVFTLVA 191



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 45/110 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +   +   +L G V T  + F   + +T++G L+   R+S N++++     ++ V R 
Sbjct: 3   FQNAVEFLPILLKGAVVTIEITFCSFVLSTVLGLLLALMRVSDNRVLSNTAATFINVIRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +P +V +F++Y  +  +            G+ +               A 
Sbjct: 63  LPIIVQLFYIYFVLPDLGVQLSAFQAGFIGLGIAYSVYQAENFRAGIQAI 112


>gi|311280450|ref|YP_003942681.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749645|gb|ADO49397.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 224

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GIV       +      +    LP+ +
Sbjct: 1   MYAFDWSSIIPSLPYLFDGLLITLKITVTAIVIGIVWGTLLAVM------RLSSFLPVSW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSVPLVMVLLWFYLIVPGFLQQVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSWLKKR 222



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 36/66 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G + T  +  + ++   + GTL+   RLS+   V+W  + YV VFR++P ++V+ +
Sbjct: 15  YLFDGLLITLKITVTAIVIGIVWGTLLAVMRLSSFLPVSWFAKAYVNVFRSVPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|319761802|ref|YP_004125739.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330826338|ref|YP_004389641.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317116363|gb|ADU98851.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329311710|gb|AEB86125.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 229

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 4/215 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S  +  +L L     ++    +    L  LY  T ++ G+P L+++ L +  
Sbjct: 14  LTVGVSLASLAVATLLGLAGAA-AKLSGRRPLVWLAQLY--TTVVRGIPELLMMLLVFYG 70

Query: 245 H-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L +            F++  + +     A++ E  R  ++A+PRGQMEAA A 
Sbjct: 71  GAIGLNSLAELWGNQEGVDLDPFVAGVLTIGFIYGAYMTETFRGAILAIPRGQMEAAWAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +    + LPQ +R  +P  T+ +L L+K ++L   +G  D+  +         + 
Sbjct: 131 GMGRLRTFVRITLPQMVRYALPSFTNNWLVLIKATALVSLIGLHDMTYLAKQSSAAAREP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L    IYL+ + +    +  ++ + +L   +
Sbjct: 191 FAFFLFTAAIYLAYTSLSLWALRAVSRRYSLGTDR 225



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 42/90 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  AIL G + T  ++ + +  AT++G    A +LS  + + W+ ++Y  V R IP L++
Sbjct: 4   YYLAILNGSLLTVGVSLASLAVATLLGLAGAAAKLSGRRPLVWLAQLYTTVVRGIPELLM 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           +  ++      L           G+ L+  
Sbjct: 64  MLLVFYGGAIGLNSLAELWGNQEGVDLDPF 93


>gi|293378561|ref|ZP_06624724.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|292642890|gb|EFF61037.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 159

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L  +       V   F +  IA     AA+ AEI R G+ ++P+GQ EAA  L L+  +
Sbjct: 14  FLFFYGLPTIGIVFDRFEAALIAFILNYAAYFAEIFRGGIQSIPQGQYEAAQVLQLSPFQ 73

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               +++PQ  + ++P + ++ +NL+K+SSL   +G  D++  G   + +    +  +L 
Sbjct: 74  TVTKIVIPQVTKIVLPSVGNEVINLVKDSSLIYILGLGDVMRAGKIAMERDA-TLLPLLG 132

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              IYL+L+ ++ + M ++  K+    
Sbjct: 133 VAIIYLTLTGILTIVMKQVEGKLNYYR 159


>gi|292492727|ref|YP_003528166.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Nitrosococcus halophilus Nc4]
 gi|291581322|gb|ADE15779.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Nitrosococcus halophilus Nc4]
          Length = 214

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 14/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A + V   ++  V + F   L++       + + ++YI  F   G   LV +   Y  
Sbjct: 17  VTAGLTVGGTIVAAVAA-FTAGLAQLSRRWYLRIISIVYIDLF--RGTSALVQLFWAY-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P+L                +    L     A+ AE+VR  + AVP+ Q EAAIAL 
Sbjct: 72  -FALPML--------GVELSAMATGIWVLGLNIGAYGAEVVRGAIQAVPQEQREAAIALN 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T R+    +++PQA+ +++PP  +  + LLK+++L   +  ++L   G  +   T ++ 
Sbjct: 123 FTPRQTLWRIIIPQAIPAMLPPFGNLLIELLKSTALVSMITLSELTFQGQMLRASTLRSA 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI  + + +Y  L+ +IA  + RL  K A+  
Sbjct: 183 EIFALVLVLYFLLAQIIAFIIRRLERKFAVGR 214



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L   G I A +     G  +LS    +  I  VY+++FR    LV +F+ Y +
Sbjct: 14  GLAVTAGLTVGGTIVAAVAAFTAGLAQLSRRWYLRIISIVYIDLFRGTSALVQLFWAYFA 73

Query: 152 VLSVLPIPDHSIVLPFGMFLN 172
           +  +           + + LN
Sbjct: 74  LPMLGVELSAMATGIWVLGLN 94


>gi|123443207|ref|YP_001007181.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122090168|emb|CAL13031.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 246

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GACYVELFRNVPLIVQFFTWYLVVPELLPADLGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP
Sbjct: 53  LRTVPNRILSSIGACYVELFRNVPLIVQFFTWYLVVPELLP 93


>gi|86357760|ref|YP_469652.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86281862|gb|ABC90925.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 241

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 6/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+   +T+  +   F+   ++G V++     LSRH    T + L   Y +T L  
Sbjct: 18  WGWLLLTAAAMTIGVSVCGFLTGTLIGTVVTFMQ--LSRHL---TIRWLADCY-TTVLRG 71

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV+    +        LG      G    P F++  +AL   +AA+ AE+ R    
Sbjct: 72  VPDLLVIYLFYFGGSAFLGSLGGMFGYQGFIGMPAFLTGTLALGAVSAAYQAEVFRGAYR 131

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V RG++EAAIA+G+      R ++ P  +R  IP L + +  +LK S+L    G  +L+
Sbjct: 132 SVARGEIEAAIAVGMRPWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALISVTGLVELL 191

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T +  E  L  + +YL ++ + ++   R+ A+     ++
Sbjct: 192 RQSQIGAGSTRRPFEFYLTAVVLYLVITWLSSILFRRMEARTIQGTRR 239



 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L     T  ++  G +  T+IGT+V   +LS +  + W+   Y  V R +P L+V
Sbjct: 18  WGWLLLTAAAMTIGVSVCGFLTGTLIGTVVTFMQLSRHLTIRWLADCYTTVLRGVPDLLV 77

Query: 145 IFFLYKSV 152
           I+  Y   
Sbjct: 78  IYLFYFGG 85


>gi|22125503|ref|NP_668926.1| histidine transport system permease HisQ [Yersinia pestis KIM 10]
 gi|45442178|ref|NP_993717.1| histidine transport system permease HisQ [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51596928|ref|YP_071119.1| ABC histidine transporter, permease subunit HisQ [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808062|ref|YP_651978.1| histidine transport system permease HisQ [Yersinia pestis Antiqua]
 gi|108812334|ref|YP_648101.1| histidine transport system permease protein HisQ [Yersinia pestis
           Nepal516]
 gi|145599264|ref|YP_001163340.1| histidine transport system permease protein HisQ [Yersinia pestis
           Pestoides F]
 gi|149365249|ref|ZP_01887284.1| histidine transport system permease protein HisQ [Yersinia pestis
           CA88-4125]
 gi|153950649|ref|YP_001400408.1| histidine ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162418808|ref|YP_001604960.1| histidine transport system permease HisQ [Yersinia pestis Angola]
 gi|165925202|ref|ZP_02221034.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937200|ref|ZP_02225765.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008559|ref|ZP_02229457.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166214201|ref|ZP_02240236.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399503|ref|ZP_02305027.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421208|ref|ZP_02312961.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424744|ref|ZP_02316497.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167469030|ref|ZP_02333734.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           FV-1]
 gi|186896008|ref|YP_001873120.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929847|ref|YP_002347722.1| histidine transport system permease HisQ [Yersinia pestis CO92]
 gi|229838347|ref|ZP_04458506.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895377|ref|ZP_04510550.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|229898913|ref|ZP_04514058.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229902687|ref|ZP_04517804.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|270490136|ref|ZP_06207210.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504640|ref|YP_003568702.1| histidine transport system permease protein HisQ [Yersinia pestis
           Z176003]
 gi|21958400|gb|AAM85177.1|AE013764_1 histidine ABC transport system inner membrane permease [Yersinia
           pestis KIM 10]
 gi|45437042|gb|AAS62594.1| histidine transport system permease protein HisQ [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590210|emb|CAH21847.1| ABC histidine transporter, permease subunit HisQ [Yersinia
           pseudotuberculosis IP 32953]
 gi|108775982|gb|ABG18501.1| histidine transport system permease protein HisQ [Yersinia pestis
           Nepal516]
 gi|108779975|gb|ABG14033.1| histidine transport system permease protein HisQ [Yersinia pestis
           Antiqua]
 gi|115348458|emb|CAL21394.1| histidine transport system permease protein HisQ [Yersinia pestis
           CO92]
 gi|145210960|gb|ABP40367.1| histidine transport system permease protein HisQ [Yersinia pestis
           Pestoides F]
 gi|149291662|gb|EDM41736.1| histidine transport system permease protein HisQ [Yersinia pestis
           CA88-4125]
 gi|152962144|gb|ABS49605.1| histidine ABC transporter, permease protein HisQ [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351623|gb|ABX85571.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           Angola]
 gi|165915063|gb|EDR33675.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922809|gb|EDR39960.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992941|gb|EDR45242.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166204557|gb|EDR49037.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960697|gb|EDR56718.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167052007|gb|EDR63415.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056626|gb|EDR66395.1| histidine ABC transporter, permease protein HisQ [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|186699034|gb|ACC89663.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229680134|gb|EEO76233.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Nepal516]
 gi|229688461|gb|EEO80532.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694713|gb|EEO84760.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701685|gb|EEO89711.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis Pestoides
           A]
 gi|262362701|gb|ACY59422.1| histidine transport system permease protein HisQ [Yersinia pestis
           D106004]
 gi|262366628|gb|ACY63185.1| histidine transport system permease protein HisQ [Yersinia pestis
           D182038]
 gi|270338640|gb|EFA49417.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355099|gb|ADE65440.1| histidine transport system permease protein HisQ [Yersinia pestis
           Z176003]
 gi|320014577|gb|ADV98148.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 228

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ +FS +L +V+ L      +    +      L    T LI G+P LVL+ L +  
Sbjct: 15  VTLELALFSVLLSVVIGLMG-AGGKLSSNRLVSG--LFECYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     +            +  I L     A+  E  R   +AV +GQ+EAA A G
Sbjct: 72  LQITLNSITESLGFVQIDIDPLSAGVITLGFIYGAYFTETFRGAYMAVSKGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   IYL  + +    +  L  + +   K+
Sbjct: 192 FFALVAGAIYLFFTTLSNGVLWWLERRYSHGVKR 225


>gi|323492515|ref|ZP_08097663.1| amino acid ABC transporter permease [Vibrio brasiliensis LMG 20546]
 gi|323313302|gb|EGA66418.1| amino acid ABC transporter permease [Vibrio brasiliensis LMG 20546]
          Length = 246

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 102/253 (40%), Gaps = 27/253 (10%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          L    +T++      + + +LG++ +L     ++    +  +A+  LY 
Sbjct: 1   MLDLQGYEASILKGAVVTIEVALLSLLLAMILGMLGAL-----AKMAPYRWARAIATLY- 54

Query: 225 STFLIFGLPTLVLIALKY--------------------QLHFDKPVLGQFNFIGGSTVSP 264
            T +I G+P LVL+ L +                          P     +++       
Sbjct: 55  -TTVIRGIPDLVLMMLIFFGGQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVS 113

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F++  + +     A++AE  R  ++AV  G++EAA A G+    A R +LLPQ +R  +
Sbjct: 114 PFVAGVLTIGFIFGAYMAETFRGAIMAVDSGELEAAKAYGMGPVLAFRRILLPQMIRHAL 173

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   + +L LLK ++L   +G  D+V +       T       +    I+L  + +    
Sbjct: 174 PGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGV 233

Query: 385 MNRLNAKIALKEK 397
           +  +  K ++  +
Sbjct: 234 LKLVERKFSIHAR 246



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL G V T  +A   ++ A I+G L    +++  +    I  +Y  V R IP LV+
Sbjct: 7   YEASILKGAVVTIEVALLSLLLAMILGMLGALAKMAPYRWARAIATLYTTVIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + S+    +               L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYSINETLNEWFASSDPNHEWTSYLPDYIDVSPFVAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|283834047|ref|ZP_06353788.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291070190|gb|EFE08299.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 224

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLIITLKITVTAVVIGIVWGTILAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKGYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y   S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLLVSYLKKR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLIITLKITVTAVVIGIVWGTILAVMRLSSFAPIAWFAKGYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|261758895|ref|ZP_06002604.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|261738879|gb|EEY26875.1| polar amino acid ABC transporter [Brucella sp. F5/99]
          Length = 314

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 14/261 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR   P      +   + +   I      + F +             + TN  I + + +
Sbjct: 67  FRQTCPSGSPVSVTARMTNHPTITSKETTMDFSVSALGGAFPQLLPAIGTNLVISIIAMI 126

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L ++     T L R        A+  + IS   I G P LV I L Y   +  P L    
Sbjct: 127 LALIGGTALTIL-RTLGIAPLNAVIGVVISF--IRGTPILVQIFLFY---YGLPAL---- 176

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G  +SP   +  +A++  ++ FI EI+R GL  +  G +EAAIALG+  +     V+
Sbjct: 177 ---GLDLSP-IQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWTKVI 232

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ    I+PPL ++   ++K ++L   +   +++     + N + + +E +L    I  
Sbjct: 233 LPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETLLCAAIILF 292

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           +++++++     L  + A + 
Sbjct: 293 AVNLVLSQCGRVLEMRFAARR 313



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 8/191 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L        ++   MI A I GT +   R      +  +  V +   R  P LV IF  
Sbjct: 110 LLPAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISFIRGTPILVQIFLF 169

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFAT 205
           Y  + ++             +  N+       +       ++     +  LGI   +  T
Sbjct: 170 YYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWT 229

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           ++     +   + +P L      I     L+ +    ++      +   +F    T+   
Sbjct: 230 KV--ILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETL--- 284

Query: 266 FMSLYIALSCY 276
             +  I  +  
Sbjct: 285 LCAAIILFAVN 295


>gi|330811272|ref|YP_004355734.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379380|gb|AEA70730.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 232

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 10/175 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCY 276
             ++ T++I G P LV + L Y        L QF  +  S + P          +A +  
Sbjct: 54  TAWLYTYVIRGTPMLVQLFLIYY------GLAQFAIVRESFLWPWLSSATFCACLAFAIN 107

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+
Sbjct: 108 TSAYTAEIIAGSLRATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQ 167

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 168 TTSLASIVTLIDITGAARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKLAERR 222


>gi|167839587|ref|ZP_02466271.1| histidine transport system permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 237

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 90/229 (39%), Gaps = 8/229 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                 +F +   LS   +T+          F L + L++     SR             
Sbjct: 7   QYWQNYLFSDGYRLSGLAITLWLLVVSIGLGFGLAVPLAIARASRSRAVSGPV------- 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++ T++  G P  V + L Y   +   V+    ++ G           +A +    A+  
Sbjct: 60  WLYTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDG-FFRSAMNCTLLAFTLNECAYAT 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI    + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA 
Sbjct: 119 EIFAGAIKSTSPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAF 178

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 179 TATVPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWIFRRMEAR 227



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 67/218 (30%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    L G   T WL    +     +   +   R S ++ V+    +
Sbjct: 5   IGQYWQNYLFSDGYR---LSGLAITLWLLVVSIGLGFGLAVPLAIARASRSRAVSGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDGFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  +         L+L A        
Sbjct: 122 AGAIKSTSPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA + Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIW 219


>gi|160936779|ref|ZP_02084145.1| hypothetical protein CLOBOL_01669 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440271|gb|EDP18017.1| hypothetical protein CLOBOL_01669 [Clostridium bolteae ATCC
           BAA-613]
          Length = 219

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 11/230 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            G     + L      M T+ +IF+ + +  + L L      R    +  +A+  +YIS 
Sbjct: 1   MGKMTIQQMLIQLAGGMGTSIQIFLVTLIFSLPLGLLV-AFGRMSKNRLLQAVVKVYIS- 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++ G P ++ + + Y   F    L +     G  +   F    I      AA+ AEI R
Sbjct: 59  -IMRGTPLMLQLMVVY---FGPYYLFRIKVGSGYRLWATF----IGFVINYAAYFAEIYR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ ++P GQ EAA  LG +  +    ++LPQ ++ I+P +T++ + L+K++SLA  +  
Sbjct: 111 SGIQSMPVGQYEAAQILGYSRFQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFTLSV 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A++ S+   +       I   +     Y   ++++A+ M  +  K+    
Sbjct: 171 AEMFSIAKALAASQTNMIP-FVAAGLFYYIFNLVVAVGMEWVEKKMDYYR 219



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 39/98 (39%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   +  +    +I +  +G LV  GR+S N+L+  + +VY+ + R  P ++ +  +Y  
Sbjct: 16  GMGTSIQIFLVTLIFSLPLGLLVAFGRMSKNRLLQAVVKVYISIMRGTPLMLQLMVVYFG 75

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
              +  I   S    +  F+               + I
Sbjct: 76  PYYLFRIKVGSGYRLWATFIGFVINYAAYFAEIYRSGI 113


>gi|186471431|ref|YP_001862749.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184197740|gb|ACC75703.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 241

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 14/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + +        +           ++ + +F + ++L L  T L+   H    + +   
Sbjct: 1   MAMSYQWLTLWGYVPEFFQAAWLTLQVTLLAFCVALILGLL-TALAGASHLVPLRVVSRG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   LI   P L+ I + +           F           + +  IAL     A++A
Sbjct: 60  YIE--LIRNTPVLLQIFIVF-----------FGLPSLGVNLSAYTAGVIALGVNVGAYMA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+G+ +VPRGQ+EAA  LGL   +    V+LPQA R++ P + +  + LL  +SL  
Sbjct: 107 EVFRAGIQSVPRGQIEAAGILGLGRSQVFIEVVLPQAARAVYPAIVNNLIQLLLGTSLLS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A+   +L      I  +T   I+   + +  YL LS  ++    ++ A++
Sbjct: 167 AIALPELTGTATVINARTLLYIQTFSVTLIAYLILSNCLSWVAAQIGARV 216



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 30/79 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + +   Y          T  +       A I+G L      S    +  + R Y+E+ 
Sbjct: 5   YQWLTLWGYVPEFFQAAWLTLQVTLLAFCVALILGLLTALAGASHLVPLRVVSRGYIELI 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P L+ IF ++  + S+
Sbjct: 65  RNTPVLLQIFIVFFGLPSL 83


>gi|282865054|ref|ZP_06274107.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces sp. ACTE]
 gi|282559977|gb|EFB65526.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Streptomyces sp. ACTE]
          Length = 214

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 22/207 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + + VLG+ +++     SR         +P+  +  F +   P LV +     +  
Sbjct: 29  VLGTLVAAVLGLAIAVAGRAPSR------LVTVPVKAVMEF-VRATPLLVQLVGAAAVF- 80

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                         T         + L  + A + +E+ R+G+  VP+GQ EA  AL L+
Sbjct: 81  --------------TSVEPLTIGIVVLGIHYATYTSEVYRAGIDGVPKGQWEACRALSLS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  + V+LPQA+R+++P L +  +++ K +     +   ++V              E+
Sbjct: 127 PRRTWQAVILPQAVRNVLPALGNYAISMFKETPFLAVITVQEMVFEARKYGTDHFAYTEV 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   I+L  S   +L M +L  ++ 
Sbjct: 187 FTLAGLIFLVASYPTSLLMRKLEKRLG 213



 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T      G + A ++G  +     + ++LV    +  +E  R  P LV +   
Sbjct: 17  LLEGFRVTLLATVLGTLVAAVLGLAIAVAGRAPSRLVTVPVKAVMEFVRATPLLVQLVGA 76

Query: 149 YKSVLSVLP 157
                SV P
Sbjct: 77  AAVFTSVEP 85


>gi|51595454|ref|YP_069645.1| ABC glutamate/aspartate transporter, permease subunit gltJ
           [Yersinia pseudotuberculosis IP 32953]
 gi|108808476|ref|YP_652392.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Antiqua]
 gi|108811263|ref|YP_647030.1| glutamate/aspartate transport system permease [Yersinia pestis
           Nepal516]
 gi|145599902|ref|YP_001163978.1| glutamate/aspartate transport system permease [Yersinia pestis
           Pestoides F]
 gi|153948463|ref|YP_001401883.1| glutamate/aspartate ABC transporter permease GltJ [Yersinia
           pseudotuberculosis IP 31758]
 gi|166008428|ref|ZP_02229326.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212579|ref|ZP_02238614.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167399443|ref|ZP_02304967.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167423628|ref|ZP_02315381.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|170025232|ref|YP_001721737.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894485|ref|YP_001871597.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229895953|ref|ZP_04511123.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Pestoides A]
 gi|229901501|ref|ZP_04516623.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Nepal516]
 gi|270489687|ref|ZP_06206761.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504418|ref|YP_003568480.1| glutamate/aspartate transport system permease [Yersinia pestis
           Z176003]
 gi|51588736|emb|CAH20347.1| ABC glutamate/aspartate transporter, permease subunit gltJ
           [Yersinia pseudotuberculosis IP 32953]
 gi|108774911|gb|ABG17430.1| glutamate/aspartate transport system permease [Yersinia pestis
           Nepal516]
 gi|108780389|gb|ABG14447.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis Antiqua]
 gi|145211598|gb|ABP41005.1| glutamate/aspartate transport system permease [Yersinia pestis
           Pestoides F]
 gi|152959958|gb|ABS47419.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pseudotuberculosis IP 31758]
 gi|165992810|gb|EDR45111.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206510|gb|EDR50990.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167051947|gb|EDR63355.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057798|gb|EDR67544.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169751766|gb|ACA69284.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697511|gb|ACC88140.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681430|gb|EEO77524.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Nepal516]
 gi|229700876|gb|EEO88905.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis Pestoides A]
 gi|262362592|gb|ACY59313.1| glutamate/aspartate transport system permease [Yersinia pestis
           D106004]
 gi|262366404|gb|ACY62961.1| glutamate/aspartate transport system permease [Yersinia pestis
           D182038]
 gi|270338191|gb|EFA48968.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294354877|gb|ADE65218.1| glutamate/aspartate transport system permease [Yersinia pestis
           Z176003]
 gi|320016182|gb|ADV99753.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 246

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+ + L      +     QF           F+S
Sbjct: 65  GACYVELFRNVPLIVQFFTWYLVVPELLPVNLGTWFKSELAPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  ++ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP+   + 
Sbjct: 53  LRTVPNRILSGIGACYVELFRNVPLIVQFFTWYLVVPELLPVNLGTW 99


>gi|322833013|ref|YP_004213040.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168214|gb|ADW73913.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 221

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 18/213 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + S + G ++++   R    +         LL++ T L   LP L++I L Y +
Sbjct: 23  LCAIAAICSLLWGTLMAVALMRAPPFWQR-------LLHLYTSLTLALPLLIVIYLLYFV 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             +  +      +G            +AL+ Y A +IA++VRS +  +PRGQ EA   LG
Sbjct: 76  LPEYDITLTSPQVG-----------VLALTLYYAPYIAQVVRSAIEMLPRGQWEACRVLG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  R V+LPQ +  ++ PL    + L+K+S+L   V   + +      I++T   +
Sbjct: 125 LSRTEQLRDVVLPQTLPQMLSPLVGLMIGLIKDSALLSIVSVQEFMYAARQAISETYAPL 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           EI L     Y  L+ +I      +  ++    +
Sbjct: 185 EIYLTVALCYWVLNSLIDWLARHIEFRMTRYRR 217


>gi|226327563|ref|ZP_03803081.1| hypothetical protein PROPEN_01434 [Proteus penneri ATCC 35198]
 gi|225204089|gb|EEG86443.1| hypothetical protein PROPEN_01434 [Proteus penneri ATCC 35198]
          Length = 206

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 13/200 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-----------LHFDKPVL 251
           FA   +R       + L   Y S F     P LV +   Y            +  + P  
Sbjct: 3   FALSAARDSAFAPLRWLATAYTSLF--RNTPLLVQLFFWYFASGEFLPQSAMMWLNTPHE 60

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F  +  S  S EF++  + L+ Y+  FIAE +R+G+  V +GQ  AA+ALGLT  ++ 
Sbjct: 61  IVFLGVTLSWPSFEFLAGIVGLTFYSTPFIAEELRAGIQGVKQGQKYAALALGLTPWQSM 120

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R V+LPQA R  +PPL  QY+N++KNSSL +A+G A+L      +  ++ +  E   +  
Sbjct: 121 RYVILPQAFRIALPPLLGQYMNVIKNSSLTMAIGVAELSYASRQVETESLRTFEAFGVAT 180

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            +Y++   ++  +      +
Sbjct: 181 ILYIAAIALMEAWGQWHQQR 200



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 24/54 (44%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +   + A R SA   + W+   Y  +FRN P LV +FF Y +    LP      
Sbjct: 1   MSFALSAARDSAFAPLRWLATAYTSLFRNTPLLVQLFFWYFASGEFLPQSAMMW 54


>gi|186895949|ref|YP_001873061.1| glutamine ABC transporter permease [Yersinia pseudotuberculosis
           PB1/+]
 gi|186698975|gb|ACC89604.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 218

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 95/188 (50%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+R +       + L++I   LI G P +V +   Y   F  P++              F
Sbjct: 42  LARAYGGWLSSHIALVFIE--LIRGTPIVVQVMFIY---FALPMMIPLRI-------DPF 89

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + +   + A+IAEI R  ++++  G  EA +ALGL+ R     V+ P A+R ++PP
Sbjct: 90  SAAVVTIIINSGAYIAEITRGAVLSIHSGFREAGLALGLSQRGTLLYVIAPLALRRMLPP 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q++  +K++SL + +G A+L      II    +A+EI      IYL +++ ++  + 
Sbjct: 150 LGNQWIVSIKDTSLFIVIGVAELTRQSQEIIAGNFRAMEIWSAVAVIYLIITLALSFVLR 209

Query: 387 RLNAKIAL 394
           RL  K+ +
Sbjct: 210 RLERKLKI 217


>gi|282852733|ref|ZP_06262075.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|282556475|gb|EFB62095.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
          Length = 158

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 1/150 (0%)

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +   F       +       V P + +  +A     AA+ AEI R GL AVP GQ EAA 
Sbjct: 5   WYATFTAIDFYFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPVGQFEAAQ 64

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
            LGL+  +    ++ PQ ++ + P + ++ +NL+K+SSL   +G  DL+  G     +  
Sbjct: 65  VLGLSRWQTINRIVRPQVVKIVFPSIGNELINLVKDSSLVYVIGLGDLLRAGNVATARDV 124

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +  +++   +YL+++ ++   +  +  K
Sbjct: 125 SLVP-LVLVGCVYLAMTAVLTALLRVVEKK 153


>gi|251791417|ref|YP_003006138.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247540038|gb|ACT08659.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 364

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 18/277 (6%)

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           LV  +  +    +RN+P       ++  V  ++              +  R     TLT+
Sbjct: 101 LVLALISILPMFWRNLPRRGRYIAIWCIVYPLIAWWLLFGGFGGLTRVETRQWGGLTLTI 160

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A     +  LGI+L+L      R  +    +AL +++I  +    L T++ ++    
Sbjct: 161 IIAAIGIAGALPLGILLAL-----GRRSNMPVLRALCVIFIEFWRGVPLITVLFMS---- 211

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L
Sbjct: 212 ------SVMLPLFLTEGTNIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAQSL 265

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQT 360
            L + +   LV+LPQA++ +IP L +  + L K++SL + +G  DL S            
Sbjct: 266 ALGYWRMQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSIQQATVDPAWL 325

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G + E  +    IY      ++ +   L  +     K
Sbjct: 326 GMSTEGYVFAAIIYWIFCFSMSRYSQHLEKRFDTGHK 362


>gi|239816642|ref|YP_002945552.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239803219|gb|ACS20286.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 217

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 96/222 (43%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L    + +     + + +F+ G ++      L        G+A+ L      L 
Sbjct: 4   FSLWDILRNLLMALRWTVVLSLIAFIGGGLVGALLLFLRLRGGSAMGRAVGLYVQ---LF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y           F           + +  +AL+ YT+AF+ EI R  +
Sbjct: 61  QGTPLLMQLFLAY-----------FGIALFGIDVSAWTAASVALTLYTSAFLTEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+ +L L+  +  R V+LPQA++  I P     + ++K ++LA  +GF +L
Sbjct: 110 AAIPKGQWEASGSLALSFSEQMRHVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              G  I N T Q   +      +Y  L   ++L+   L  K
Sbjct: 170 TKAGSMISNATFQPFVVFSCVALLYFVLCFPVSLYAKNLERK 211


>gi|153009882|ref|YP_001371097.1| polar amino acid ABC transporter inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561770|gb|ABS15268.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 385

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 129/307 (42%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     + G   +S    V     ++V +   + PL++     K++ ++L   
Sbjct: 92  ACWAFVNAKYEQFIYGRYPISERWRVNLTALIFVVL---LVPLLIPKAPKKALNAILFFF 148

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              IV  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 149 VFPIVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K   +++I       L T++ +A      F  P               + +   I ++ +
Sbjct: 209 KTFSIIFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T L++LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLIVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +             ++   F++      ++ +   +  +
Sbjct: 319 DTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 378

Query: 392 IALKEKK 398
           +    K+
Sbjct: 379 LDTGHKR 385



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++     +++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTFSIIFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|86360227|ref|YP_472116.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284329|gb|ABC93389.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 2/172 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+         +PTLV + L Y   F     G   ++        F    I L    AA
Sbjct: 40  PLVAAYVSYHRNVPTLVQLMLWYFGIFTLMPNGVATWLASHNAEAIF--AVIGLGLCQAA 97

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + +E +RSG+ +V  GQMEAA ALG  +  A R V++PQ +R+ +PPL +  ++L KNSS
Sbjct: 98  YFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLFKNSS 157

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LAV +G ++L      I N + +  EI LI   +YL  S++I      L+ +
Sbjct: 158 LAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVIMSIGAYLSMR 209


>gi|121590873|ref|ZP_01678197.1| membrane protein [Vibrio cholerae 2740-80]
 gi|121728658|ref|ZP_01681676.1| arginine ABC transporter, permease protein [Vibrio cholerae V52]
 gi|153824338|ref|ZP_01977005.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2]
 gi|227812325|ref|YP_002812335.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|229522318|ref|ZP_04411734.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TM
           11079-80]
 gi|254226189|ref|ZP_04919784.1| arginine ABC transporter, permease protein [Vibrio cholerae V51]
 gi|262189843|ref|ZP_06048176.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae CT
           5369-93]
 gi|297580208|ref|ZP_06942135.1| membrane protein [Vibrio cholerae RC385]
 gi|298499554|ref|ZP_07009360.1| membrane protein [Vibrio cholerae MAK 757]
 gi|121547280|gb|EAX57401.1| membrane protein [Vibrio cholerae 2740-80]
 gi|121629069|gb|EAX61515.1| arginine ABC transporter, permease protein [Vibrio cholerae V52]
 gi|125621291|gb|EAZ49630.1| arginine ABC transporter, permease protein [Vibrio cholerae V51]
 gi|149741892|gb|EDM55921.1| arginine ABC transporter, permease protein [Vibrio cholerae MZO-2]
 gi|227011467|gb|ACP07678.1| arginine ABC transporter, permease protein [Vibrio cholerae M66-2]
 gi|229340303|gb|EEO05309.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae TM
           11079-80]
 gi|262034274|gb|EEY52681.1| arginine ABC transporter permease protein ArtQ [Vibrio cholerae CT
           5369-93]
 gi|297535854|gb|EFH74688.1| membrane protein [Vibrio cholerae RC385]
 gi|297541535|gb|EFH77586.1| membrane protein [Vibrio cholerae MAK 757]
          Length = 229

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F   G       F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFFITGEFIEISPFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSIQ 219


>gi|310639892|ref|YP_003944650.1| glutamine abc transporter permease protein [Paenibacillus polymyxa
           SC2]
 gi|309244842|gb|ADO54409.1| Glutamine ABC transporter permease protein [Paenibacillus polymyxa
           SC2]
          Length = 216

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 19/220 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    LT++      +FSF LGIV  +              +   L  ++ F+I  +
Sbjct: 13  RFILEGFLLTLEVAIYSIIFSFALGIVFGILRY----------TRIPVLSQVAAFIIDLI 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + + +    P +G    +          +    LS +  A IAEIVRSGL +V
Sbjct: 63  RNLPLLLIIFFIGMVLPSIGLSISLK--------WAAITGLSIFEGAMIAEIVRSGLNSV 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ+EAA + GL++ +    ++LPQA+R ++PP+ SQ+++L K++SLAV +   +L   
Sbjct: 115 HKGQLEAARSSGLSYSQTLWHIILPQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHN 174

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +  Q     I  +L   F+Y +++  ++L   RL  +
Sbjct: 175 IQIVGGQNQSFVIPALLFAAFLYFAVNYSMSLIARRLEVR 214



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 40/88 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  IL GF+ T  +A   +I +  +G + G  R +   +++ +    +++ RN+P 
Sbjct: 8   AWPNVRFILEGFLLTLEVAIYSIIFSFALGIVFGILRYTRIPVLSQVAAFIIDLIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L++IFF+   + S+            G+
Sbjct: 68  LLIIFFIGMVLPSIGLSISLKWAAITGL 95


>gi|307727762|ref|YP_003910975.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588287|gb|ADN61684.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + + +LY+  F   G P L+ + L +   F  P++              +++
Sbjct: 42  RVSPVAWLRRIVVLYVEVF--QGTPLLMQLFLAF---FGLPLV--------GVDVSPWVA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQA++  + P  
Sbjct: 89  ATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQALKIAVAPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++   +  +   L
Sbjct: 149 GFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVL 208

Query: 389 NAKIALKEKK 398
             +  + + +
Sbjct: 209 EKRNKVGQHR 218



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L+    T  L+    +   ++G L+ A R+S    +  I  +YVEVF+  P L
Sbjct: 7   WDIARNLLLAARWTVLLSLIAFVGGGLVGLLLLAMRVSPVAWLRRIVVLYVEVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  V       +     + L               A
Sbjct: 67  MQLFLAFFGLPLVGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111


>gi|167035336|ref|YP_001670567.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166861824|gb|ABZ00232.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 223

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 102/219 (46%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+       V    LG +L+L     S+      G      Y++ F      ++
Sbjct: 16  WDGMVMTLQLMVMGVVGGIALGTILALMRLSSSKLLSRLAG-----AYVNYFR-----SI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 66  PLLLVITWFYLAVPFVLRW-ITGEDTPVGAFTSCVVAFMMFEAAYFCEIVRAGVQSISKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 125 QMGAAQALGMNYAQTMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNSARS 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +  G++ E ++    +Y  +S   +  + RL  +I +
Sbjct: 185 NGDIIGRSHEFLIFAGVVYFIISFSASWLVKRLQKRITV 223



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 44/111 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++       A+  G V T  L   G++    +GT++   RLS++KL++ +   YV  F
Sbjct: 3   MDFSEIIPALPALWDGMVMTLQLMVMGVVGGIALGTILALMRLSSSKLLSRLAGAYVNYF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R+IP L+VI + Y +V  VL                               
Sbjct: 63  RSIPLLLVITWFYLAVPFVLRWITGEDTPVGAFTSCVVAFMMFEAAYFCEI 113


>gi|325695482|gb|EGD37382.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
 gi|327472447|gb|EGF17878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|328944591|gb|EGG38752.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 228

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +L    L + +  +  +   ++Y++         L+L      
Sbjct: 18  PVTLIIMVVAILLSFIPALLL-ALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +                   +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     + + Q 
Sbjct: 137 GLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKDITALAKIEASHSYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   IYL +  +I      L  + AL
Sbjct: 197 SESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + I   L+  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGIPVTLIIMVVAILLSFIPALLLALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
               S+L     S+     +F  N       + 
Sbjct: 74  SLFPSLLNQIFKSLGSQVDVFKFNPLYYAFIIY 106


>gi|312864828|ref|ZP_07725059.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus downei F0415]
 gi|311099955|gb|EFQ58168.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus downei F0415]
          Length = 213

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T++    + + S  LGIVL+            K      LL I
Sbjct: 1   MSYVLEILPALLNGVLVTLEVFCIVIILSIPLGIVLAFLM-------QIKFKPLNWLLTI 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                 V     +  +A +   AA+ AEI
Sbjct: 54  YVWIMRGTPLLLQLIFFYYV-----------LPSVGIVFDRLPAAILAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ A+P+GQ EAA  L     +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGIDAIPKGQYEAAKVLKFNQIQTIRYIILPQVVKIVLPSVFNEVINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+    T  N+      +  +   IYL L  ++ L   R+  K 
Sbjct: 163 GVGDLLLESRTASNRDASLAPMF-VAGAIYLFLVGVVTLASKRIEKKF 209



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G + T  +    +I +  +G ++        K + W+  +YV + R  P L+ 
Sbjct: 7   ILPALLNGVLVTLEVFCIVIILSIPLGIVLAFLMQIKFKPLNWLLTIYVWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F Y  + SV  + D          LN             +A 
Sbjct: 67  LIFFYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGIDAI 110


>gi|292670513|ref|ZP_06603939.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Selenomonas noxia ATCC 43541]
 gi|292647923|gb|EFF65895.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Selenomonas noxia ATCC 43541]
          Length = 247

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 3/204 (1%)

Query: 192 FSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            + ++G V ++L +   +       G   PL ++    ++ +     I L + + +  P 
Sbjct: 15  VTLLVGFVSIALGSLLGALITWANLGGPAPLRWLVVGYVYVMRCTPSIVLLFIVFYGLPK 74

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L    F          +   I  +    A+I+E+ R+   AVPRGQ EAA++ GLT  +A
Sbjct: 75  LLDTMFGYDMNAMHRAVFAIITFTLLFGAYISEVFRAAYSAVPRGQYEAAVSAGLTPFQA 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--QAIEIIL 368
            R V+L Q     +P   +  +NLLK +SLA  +G  DL+  G  II Q      IEI L
Sbjct: 135 FRHVMLGQTAIIALPNFGNAAINLLKEASLAYTIGLIDLIGKGNLIIAQNFGAYGIEIYL 194

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
             M +Y  + +++    + L  ++
Sbjct: 195 ACMLVYWVMVLLLEQVFHWLEKRL 218



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 12/202 (5%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  + F  +   +++G L+    L     + W+   YV V R  P +V++F +
Sbjct: 9   LLSYLDVTLLVGFVSIALGSLLGALITWANLGGPAPLRWLVVGYVYVMRCTPSIVLLFIV 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +  +L          FG  +N    +   +   T     +F   +  V     + + 
Sbjct: 69  FYGLPKLL-------DTMFGYDMNAMHRAVFAIITFT----LLFGAYISEVFRAAYSAVP 117

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  +E    A  L     F    L    +IAL    +    +L + +      +      
Sbjct: 118 RGQYEAAVSA-GLTPFQAFRHVMLGQTAIIALPNFGNAAINLLKEASLAYTIGLIDLIGK 176

Query: 269 LYIALSCYTAAFIAEIVRSGLI 290
             + ++    A+  EI  + ++
Sbjct: 177 GNLIIAQNFGAYGIEIYLACML 198


>gi|311114712|ref|YP_003985933.1| glutamine ABC transporter permease [Gardnerella vaginalis ATCC
           14019]
 gi|310946206|gb|ADP38910.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Gardnerella vaginalis ATCC 14019]
          Length = 369

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 108/254 (42%), Gaps = 14/254 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+VI  L +           S  L      +     F    +    K  + + V+G ++ 
Sbjct: 37  LIVIALLLRLSNPPEGENQLSWDLWNPAVESEAWTDFYLPGLWMTLKASLLA-VVGSIVF 95

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                L R       +++  + +  F       L++I L     F               
Sbjct: 96  GLLFGLLRLLPNLFLRSISAVVVE-FCRAVPVLLLMIFLWRGFAF------------AGI 142

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               + ++ ++L  Y  + +AE+VRSG+  +P GQ EA++ALGL+  ++   + +PQA+ 
Sbjct: 143 SGASYWAVVLSLILYNGSVVAELVRSGVGNLPNGQREASLALGLSQYQSLTQIEMPQAII 202

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++P   +Q + +LK+++L   + + DL+     + +     ++ + +   +Y  +   +
Sbjct: 203 AMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFNILQTLTVAAVVYFLICWAL 262

Query: 382 ALFMNRLNAKIALK 395
           + F   L +K++ +
Sbjct: 263 SWFAEWLPSKLSSR 276



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 17/173 (9%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M K   K++       K L  +R+ NI   ++ AL++  + L       +N  +    L 
Sbjct: 3   MAKKQEKSLLFDAPGPKALKKIRIANIVACVVFALIVIALLLRL-----SNPPEGENQLS 57

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
              L   A               ++    L G   T   +   ++ + + G L G  RL 
Sbjct: 58  WD-LWNPA-----------VESEAWTDFYLPGLWMTLKASLLAVVGSIVFGLLFGLLRLL 105

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            N  +  I  V VE  R +P L+++ FL++              +   + L N
Sbjct: 106 PNLFLRSISAVVVEFCRAVPVLLLMIFLWRGFAFAGISGASYWAVVLSLILYN 158


>gi|222153141|ref|YP_002562318.1| amino acid ABC transporter permease [Streptococcus uberis 0140J]
 gi|222113954|emb|CAR42213.1| putative amino acid ABC transporter permease protein [Streptococcus
           uberis 0140J]
          Length = 213

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + + S  LG V +          + K  +    LY+  +++ G P L
Sbjct: 12  LDGAKITLQVFFIVIILSIPLGAVFAFLM-----KVNFKPLQWFLTLYV--WIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGVTFDRMPAAILAFTMNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L LT  +  + ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLTPFQTIQHIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             N+    +  + I   IYL L  ++ +   ++  K +
Sbjct: 174 AANRDA-TLAPMFIAGLIYLLLIGIVTIISKQVEKKFS 210



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 33/100 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  +I +  +G +         K + W   +YV + R  P L+ + F 
Sbjct: 11  LLDGAKITLQVFFIVIILSIPLGAVFAFLMKVNFKPLQWFLTLYVWIMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D          +N              A 
Sbjct: 71  YYVLPSVGVTFDRMPAAILAFTMNYAAYFAEIFRGGIEAI 110


>gi|254464498|ref|ZP_05077909.1| polar amino acid uptake family ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
 gi|206685406|gb|EDZ45888.1| polar amino acid uptake family ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
          Length = 248

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I   +F LG+V+ LF     + +  K  +   LL I T +I  +P LVLI + Y +  
Sbjct: 34  LQIAFGAFGLGLVIGLFG-AYGKLYGGKVTRD--LLAIYTTVIRAVPELVLILILYYVGS 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D          GG        +    L     A+  E++R  + AVP GQ+EAA + G+ 
Sbjct: 91  DIINKISEAMGGGRVEINGVAAGIWVLGVVQGAYATEVLRGAIKAVPVGQIEAAKSYGMP 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M   +P L + +L   K+++L   VGF +L        + T      
Sbjct: 151 AFMTMRRVTIPAMMSFAVPGLANLWLIATKDTALLAVVGFNELTLETRQAASSTRAYFTF 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L   F+YL +++   +   R+  
Sbjct: 211 FLAAGFLYLMVTLCSGVVFARVEK 234


>gi|310768187|gb|ADP13137.1| Histidine transport system permease protein [Erwinia sp. Ejp617]
          Length = 228

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 7/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                  F+ +LG++ +      +R  + +    +  +Y  T LI G+P LVL+ L +  
Sbjct: 19  LALSSVAFAVLLGLIGA-----GARLSNRRPLAVISEVY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F          ++  I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 72  LQIALNQVTDFFGFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWMAVPKGQVEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTRSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  +  +  K+
Sbjct: 192 WFAIVAGIIYLIFTTLSNGVLWWLERRYTVGVKR 225



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I  G + T  LA S +  A ++G +    RLS  + +A I  VY  + R +P LV+
Sbjct: 5   YSEVIFKGALVTLELALSSVAFAVLLGLIGAGARLSNRRPLAVISEVYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|168231678|ref|ZP_02656736.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194470531|ref|ZP_03076515.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197247679|ref|YP_002145639.1| glutamate/aspartate ABC transporter permease GltK [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204930484|ref|ZP_03221414.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|194456895|gb|EDX45734.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197211382|gb|ACH48779.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|204320418|gb|EDZ05621.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205333960|gb|EDZ20724.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 224

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIIPSLPYLLAGLVITLKITVTAVVVGIVWGTILAVM------RLSSFTPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFTPIAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|167897972|ref|ZP_02485374.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 7894]
          Length = 229

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +   ++  LY  T LI  +P LVL+ 
Sbjct: 11  WAGTIETVKLAVLSLAASLVLGLAGAA-AKLSSNRALASVGTLY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++  Q MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  L +  L  + +   ++
Sbjct: 188 TLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRR 226


>gi|326333231|ref|ZP_08199478.1| glutamate permease [Nocardioidaceae bacterium Broad-1]
 gi|325948875|gb|EGD40968.1| glutamate permease [Nocardioidaceae bacterium Broad-1]
          Length = 295

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 110/261 (42%), Gaps = 13/261 (4%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
            V+  I  +V+ +  +            +              +F    +      F   
Sbjct: 19  WVYSAIALVVLAWVAWIVYSKFDETGQWAADKWKPFLEAPVWENFLIPGLLGTLSAFAAG 78

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            VL +    F   + R    +       + +  F    +P L+L+   Y        L  
Sbjct: 79  AVLALAFG-FVFAVGRLSQSRLISVPSAVVVEFF--RAIPMLLLMMFIYFAQSGMLGLE- 134

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                    +  F ++ + L  Y  + +AE++R+G+ A+P+GQ EA +A+GL+  +  R 
Sbjct: 135 ---------TSVFWAVVLGLMLYNGSVLAEVIRAGVNALPKGQSEAGVAIGLSPGQVMRT 185

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +LLPQA+RS++P + +Q + LLK+++L   + + +L++    I       I   ++   I
Sbjct: 186 ILLPQAVRSMLPAIIAQLVVLLKDTALGYILAYDELLNQINKIEGNYDNLIPAAIVVALI 245

Query: 374 YLSLSIMIALFMNRLNAKIAL 394
           Y+S++ ++ L  N + A+   
Sbjct: 246 YISINTILGLVANFVEARTRR 266



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 97/267 (36%), Gaps = 34/267 (12%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N     I  ++L  +     +                   +  G 
Sbjct: 3   ASVLYDAPGPRGKALNWVYSAIALVVLAWVAWIVYSK-----------------FDETGQ 45

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
                  P+     +   ++ G + T     +G + A   G +   GRLS ++L++    
Sbjct: 46  WAADKWKPFLEAPVWENFLIPGLLGTLSAFAAGAVLALAFGFVFAVGRLSQSRLISVPSA 105

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLP-IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           V VE FR IP L+++ F+Y +   +L         +  G+ L N  +    +    NA  
Sbjct: 106 VVVEFFRAIPMLLLMMFIYFAQSGMLGLETSVFWAVVLGLMLYNGSVLAEVIRAGVNALP 165

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---ALKYQLHF 246
              S   G+ + L   ++ R         LP    S         +VL+   AL Y L +
Sbjct: 166 KGQSEA-GVAIGLSPGQVMRTI------LLPQAVRSMLPAIIAQLVVLLKDTALGYILAY 218

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           D+ +L Q N I G+  +    ++ +AL
Sbjct: 219 DE-LLNQINKIEGNYDNLIPAAIVVAL 244


>gi|307130486|ref|YP_003882502.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
 gi|306528015|gb|ADM97945.1| amino acid ABC transporter permease [Dickeya dadantii 3937]
          Length = 237

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 7/217 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F   L     +          ++ + +++L + ++L    + R    +    L   
Sbjct: 7   MALDFSTVLTGHYGAMVVQGATVTLELALGAWLLAMFIALLLLVI-RLTEHRVATRLVAA 65

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYIALSCYTAAFI 281
           YIS      +PTL+ + + Y   F  P L   +  G     + EF+    AL    AA+ 
Sbjct: 66  YIS--YHRNVPTLIQLMMWY---FAIPTLLPESVQGWINAFNAEFLFSMFALGLCQAAYF 120

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E +RSGL A+P GQ EAA ALG+++ +A R V+LPQ +R+ +P L +  + L KN+SLA
Sbjct: 121 SEDIRSGLRAIPDGQNEAARALGMSYMRAMREVILPQGIRNALPALINHTVLLFKNTSLA 180

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + +G A+L  V   I NQT    E  +I    YL+ S
Sbjct: 181 MVIGVAELTYVTRDIENQTFHTFEAYVIGTLGYLAFS 217



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   T  LA    + A  I  L+   RL+ +++   +   Y+   RN+P L+ 
Sbjct: 19  YGAMVVQGATVTLELALGAWLLAMFIALLLLVIRLTEHRVATRLVAAYISYHRNVPTLIQ 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           +   Y ++ ++LP      +  F
Sbjct: 79  LMMWYFAIPTLLPESVQGWINAF 101


>gi|163745577|ref|ZP_02152937.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
 gi|161382395|gb|EDQ06804.1| amino acid ABC transporter, permease protein [Oceanibulbus
           indolifex HEL-45]
          Length = 432

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 19/228 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R L    L M         S  +G+ L+L      R  H    K + +++I       L 
Sbjct: 220 RDLGGFMLNMMLGITCVSLSLPIGVALAL-----GRQSHLPIVKGICVVFIEFVRGVPLI 274

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           +    F+ + I ++ +++A+IAE++R GL A+P
Sbjct: 275 TLLFVANVMLAYFFPP----------GSGVDLFIRVVIMITMFSSAYIAEVIRGGLAALP 324

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VS 351
           +GQ EAA +LGL + +A RL++LPQAM+  IP + +  + L K+++L   +   D+  + 
Sbjct: 325 KGQYEAADSLGLDYAQAMRLIILPQAMKISIPGIVNIAVGLFKDTTLVSVISLFDIIGMI 384

Query: 352 VGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            G  + +    G   E+ +    ++  +   I+ +   L  ++A   +
Sbjct: 385 RGPILASTDWNGVYWELFMFASLLFFIVCYGISQYSQWLERRLATDHR 432


>gi|312173031|emb|CBX81286.1| Histidine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 228

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            ++       +T++      VF+ +LG++ +      SR           +  + T LI 
Sbjct: 5   YSDVIFKGALVTLELALSSVVFAVLLGLIGAAAKLSNSRPLA-------AMSEVYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +             F          ++  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIALNQLTDFFSFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWM 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ+EAA A G T  +    +L P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 AVPKGQLEAATAFGFTRFQTFLRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T Q     ++   IYL  + +    +  L  +  +  K+
Sbjct: 178 KATQLAGKSTWQPFWFAIVAGVIYLIFTTLSNGVLWWLERRYTVGVKR 225



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I  G + T  LA S ++ A ++G +  A +LS ++ +A +  VY  + R +P LV+
Sbjct: 5   YSDVIFKGALVTLELALSSVVFAVLLGLIGAAAKLSNSRPLAAMSEVYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|116627710|ref|YP_820329.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116100987|gb|ABJ66133.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 213

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T+     + V S  LGIVL+            K    L  LY+
Sbjct: 1   MSYVLEVLPALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQ-----IRFKPLNWLLTLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                 V     +  +A +   AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYYV-----------LPSVGIVFDRLPAAILAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+    T  N+    +  + +   IYL L  ++ +    +  K 
Sbjct: 163 GVGDLLLESRTAANRDA-TLAPMFVAGAIYLILVGVVTVASKNIEKKF 209



 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T  + F  ++ +  +G ++        K + W+  +YV + R  P L+ + F
Sbjct: 10  ALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQIRFKPLNWLLTLYVWIMRGTPLLLQLIF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  + SV  + D          LN              A 
Sbjct: 70  VYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAI 110


>gi|299535497|ref|ZP_07048818.1| polar amino acid transport system permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298728697|gb|EFI69251.1| polar amino acid transport system permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 234

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 7/233 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F + L    L      +    +I VFS + G++L +    + +  H    K +  +
Sbjct: 1   MENNFDVVLIAEVLPTLLQYLPITFEILVFSILFGMMLGIVL-AIPKLLHIPILKQVITI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS   I G P LV + L +   +  P L +   I   T       + I  +   AA  A
Sbjct: 60  YISF--IRGTPILVQLFLVF---YGIPALLKLIHID-VTRMDAMYFVIITYTFSNAAAFA 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+ ++ V RGQMEAA ++GL+  +A   ++ PQA+R   P + +  ++ LK++SLA 
Sbjct: 114 EIFRAAILTVDRGQMEAAYSVGLSGSQAFMRIVFPQAIRVAFPNIANTMISSLKDTSLAF 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++G  D+V  G T+I  T +A EI +    +Y  + I++              
Sbjct: 174 SIGVMDMVGRGETLIASTTRAFEIYVALSIVYYVIVIILEKVFKFNERYFNRY 226



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 36/83 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     TF +    ++   ++G ++   +L    ++  +  +Y+   R  P LV +F +
Sbjct: 17  LLQYLPITFEILVFSILFGMMLGIVLAIPKLLHIPILKQVITIYISFIRGTPILVQLFLV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFL 171
           +  + ++L +    +     M+ 
Sbjct: 77  FYGIPALLKLIHIDVTRMDAMYF 99


>gi|323529255|ref|YP_004231407.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386257|gb|ADX58347.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 238

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L+          ++ + +FVL ++L L  T L+        + +  +YI    I   P 
Sbjct: 11  YLNDFVRASWLTLQVTLLAFVLAMLLGLL-TALASASRVSLLRGIASVYIEA--IRNTPV 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ I + +           F           + +  IAL     A++AE+ R+G+ +VPR
Sbjct: 68  LLQIFIVF-----------FGLPSLGITLNAYTAGVIALGVNVGAYLAEVFRAGIQSVPR 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA  LGL   +    V+LPQA R++ P + +  + LL  +SL  A+   +L     
Sbjct: 117 GQVEAASILGLERSQIFMEVVLPQAARAVYPAIVNNLIQLLLGTSLLSAIALPELSGTAT 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I  +T   I+   I +  YL LS +++     + A++
Sbjct: 177 VINARTLLYIQTFTITLIAYLFLSNVLSWVAGLIGARM 214



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 84  SYATAILVGFVN--------TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           SY    L G++N        T  +     + A ++G L      S   L+  I  VY+E 
Sbjct: 2   SYEWITLAGYLNDFVRASWLTLQVTLLAFVLAMLLGLLTALASASRVSLLRGIASVYIEA 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLP 157
            RN P L+ IF ++  + S+  
Sbjct: 62  IRNTPVLLQIFIVFFGLPSLGI 83


>gi|169795314|ref|YP_001713107.1| histidine transport system permease ABC transporter membrane
           protein [Acinetobacter baumannii AYE]
 gi|213158699|ref|YP_002319997.1| histidine transport system permease protein HisM [Acinetobacter
           baumannii AB0057]
 gi|215482847|ref|YP_002325050.1| Histidine transport system permease protein hisM [Acinetobacter
           baumannii AB307-0294]
 gi|294838852|ref|ZP_06783535.1| Histidine transport system permease protein hisM [Acinetobacter sp.
           6013113]
 gi|294858198|ref|ZP_06795967.1| Histidine transport system permease protein hisM [Acinetobacter sp.
           6013150]
 gi|301347434|ref|ZP_07228175.1| Histidine transport system permease protein hisM [Acinetobacter
           baumannii AB056]
 gi|301512552|ref|ZP_07237789.1| Histidine transport system permease protein hisM [Acinetobacter
           baumannii AB058]
 gi|301597597|ref|ZP_07242605.1| Histidine transport system permease protein hisM [Acinetobacter
           baumannii AB059]
 gi|169148241|emb|CAM86104.1| Histidine transport system permease protein (ABC superfamily,
           membrane) [Acinetobacter baumannii AYE]
 gi|213057859|gb|ACJ42761.1| histidine transport system permease protein HisM [Acinetobacter
           baumannii AB0057]
 gi|213988857|gb|ACJ59156.1| Histidine transport system permease protein hisM [Acinetobacter
           baumannii AB307-0294]
          Length = 237

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 88/220 (40%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G VL++    L+R            +++ T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFVLAVPL-SLARVSENIWLHGP--VWLFTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + +   +  +          +A +  T+A+  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYIHEHQTLD-AFFREGINCTILAFALNTSAYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFSAFGIAAVLYAVLAFILIWIFRKLEKR 227


>gi|258611907|ref|ZP_05711708.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293596367|ref|ZP_05231017.2| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|293596977|ref|ZP_05266174.2| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|300765936|ref|ZP_07075908.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|258607029|gb|EEW19637.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293584368|gb|EFF96400.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|293595255|gb|EFG03016.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300513322|gb|EFK40397.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
          Length = 214

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG V+++           K      +L I  +++ G P L
Sbjct: 13  LDGAKTTLLVFAVTLVCSIPLGAVVAVGNIS-------KIAPLKFILNIYIWIMRGTPLL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     +++IA     AA+ AEI R G +++  G
Sbjct: 66  LQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 115 QYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 175 AMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKRFS 211



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 8   ILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 68  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 96


>gi|317047033|ref|YP_004114681.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948650|gb|ADU68125.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 87/223 (39%), Gaps = 11/223 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                        +       + S V     +L    L      +    + ++   T L 
Sbjct: 1   MTTFTDWDIVRNLLLAARWTILLSLVAFFGGTLVTLPLLFLRLLRKPWLMRVIRGYTELF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ YT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGIDVAPWTAASLALTLYTSAFLVDIWYGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+  LGLT  +    V+ PQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 RALPKGQWEASRCLGLTFGQTLYRVVAPQAIRIAIAPTVGFAVQVVKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 170 TKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSRYSQYLEKKF 212


>gi|242241399|ref|YP_002989580.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133456|gb|ACS87758.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 244

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 105/228 (46%), Gaps = 11/228 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                +FP   +   A     S + G   +L  T L        G     L         
Sbjct: 12  YLMWGTFPDGPLGGAALTLALSLMAGTASALLGTLLGVALAMSRGWPGAALAAVLGFFRA 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P    I L +  +F  P+L   +        PE  ++  AL+   +A++A  V++G+ A
Sbjct: 72  IPV---IMLIFWTYFLLPMLFGVDI-------PEITTVVCALALIASAYLAHGVKAGIAA 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + RGQ +A ++LG    +  R ++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  
Sbjct: 122 IGRGQWQAGLSLGFGRWRVLRYIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTF 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   + N++    +E+ L    +Y  L + + L  N ++ +   + ++
Sbjct: 182 LATQVNNRSMVYPMEVFLFVALVYFLLCLTLDLAANAVSRRFHHRLRQ 229


>gi|224582498|ref|YP_002636296.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|224467025|gb|ACN44855.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
          Length = 224

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIIPSLPYLLAGLVITLKITVTAVVVGIVWGTILAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLQWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLQW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|83950194|ref|ZP_00958927.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83838093|gb|EAP77389.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 266

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 11/224 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                      N  I + S  +G VL +    L +    +  + +  +    F       
Sbjct: 50  WTPTLAKGFGFNVLISILSMAIGTVLGVGLGIL-QVSPLRPVRQVAWVITQFFRNSPWLV 108

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+        +    +  Q    G     P ++   I LS    A+++E +R  ++++P 
Sbjct: 109 LL-------FYCILLIPFQIEVFGTKIPFPGWVKAVIGLSLPVMAYMSEYMRGAILSIPT 161

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+A +LG +  +  R ++LPQ ++ ++P   + Y  L   + L   VG  D++++  
Sbjct: 162 GQWESAESLGFSRGQTLREIILPQTIKRVLPSWMNLYAVLTMATPLVSIVGVNDVMALTR 221

Query: 355 TIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++  G+    I + L  +  +      I+     L  K ++K
Sbjct: 222 AALSAEGRVDLLIPMYLYILCWFFLYCYPISALTRWLERKYSVK 265



 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 42/113 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  GF     ++   M   T++G  +G  ++S  + V  +  V  + FRN P LV+
Sbjct: 50  WTPTLAKGFGFNVLISILSMAIGTVLGVGLGILQVSPLRPVRQVAWVITQFFRNSPWLVL 109

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           +F+    +   + +    I  P  +             M    +  + S   G
Sbjct: 110 LFYCILLIPFQIEVFGTKIPFPGWVKAVIGLSLPVMAYMSEYMRGAILSIPTG 162


>gi|317407718|gb|EFV87648.1| hypothetical protein HMPREF0005_03583 [Achromobacter xylosoxidans
           C54]
          Length = 217

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 14/198 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   + VL + L+L A  + R    +  + L  +Y+  F   G   LV +   +  
Sbjct: 21  VTLEIMAGAVVLAVPLALVAG-VGRLSTVRPVRWLASIYVEVF--RGTSALVQL---FWF 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+             P  +   + L+    A+ AE+VR  + AVP GQ EA +AL 
Sbjct: 75  YFVLPLF--------GVQLPAMLVGIVVLALNAGAYGAEVVRGAIRAVPPGQREAGVALN 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R +++PQA+ +++PP  +  + LLKN++L   +   DL   G  + ++T +  
Sbjct: 127 LTRGQIMRRIVVPQAIPAMLPPAGNLLIELLKNTALVSLITITDLTFRGQLLRSETLRTT 186

Query: 365 EIILIWMFIYLSLSIMIA 382
           EI  + + +Y +++++I 
Sbjct: 187 EIFTLMLLLYFAVALLIT 204



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ A  +  + G GRLS  + V W+  +YVEVFR    LV +F+ 
Sbjct: 15  LLEGLAVTLEIMAGAVVLAVPLALVAGVGRLSTVRPVRWLASIYVEVFRGTSALVQLFWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +          +V    + LN
Sbjct: 75  YFVLPLFGVQLPAMLVGIVVLALN 98


>gi|296313423|ref|ZP_06863364.1| amino acid ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
 gi|296840055|gb|EFH23993.1| amino acid ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
          Length = 219

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  L L+K +S+  
Sbjct: 103 EAVRAGILAVPKGQVEAGKAVGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +I 
Sbjct: 163 AVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIR 213



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|260597071|ref|YP_003209642.1| glutamate/aspartate transport system permease gltJ [Cronobacter
           turicensis z3032]
 gi|260216248|emb|CBA29165.1| Glutamate/aspartate transport system permease protein gltJ
           [Cronobacter turicensis z3032]
          Length = 246

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQDAPFGNTTYLGWLWSGFQVTVALSISAWIIAFLVGSLFGILRTVPNRFLSAL 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTCYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNVQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I + MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVFINTVIMVVMNLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 7/155 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +  GF  T  L+ S  I A ++G+L G  R   N+ ++ +   YVE+FRN+P +V
Sbjct: 20  TYLGWLWSGFQVTVALSISAWIIAFLVGSLFGILRTVPNRFLSALGTCYVELFRNVPLIV 79

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
             F  Y  V  +LP       L               L+      +F  + V   V +  
Sbjct: 80  QFFTWYLVVPELLPE-----DLGMWFKAELDPNVQFFLSSMICLGLFTAARVCEQVRAAI 134

Query: 204 --ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
               R  ++     G  LP  Y    L      +V
Sbjct: 135 QSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIV 169


>gi|294636989|ref|ZP_06715311.1| arginine ABC transporter, permease protein ArtQ [Edwardsiella tarda
           ATCC 23685]
 gi|291089817|gb|EFE22378.1| arginine ABC transporter, permease protein ArtQ [Edwardsiella tarda
           ATCC 23685]
          Length = 238

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 2/187 (1%)

Query: 212 HEKTGKALPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                + LP + +  F+ FG    L+ ++    L+     L     I    VSP F+   
Sbjct: 50  WVTLLRGLPEILVVLFIYFGSSQLLLWLSDGIPLNLGFTTLTLQLNIDNFEVSP-FLCGV 108

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+   AA+ ++ +R  L AVP+GQ EA +ALGL+       +++PQ  R  +P L +Q
Sbjct: 109 LALALLYAAYGSQTLRGALKAVPQGQREAGMALGLSKTHIFFRLVMPQMWRHALPGLGNQ 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK+++L   +   DL+    +I  +T +      +   IYL ++++    +  + +
Sbjct: 169 WLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYCVAAAIYLLITLLSQSVLKHIES 228

Query: 391 KIALKEK 397
           +    E+
Sbjct: 229 RTTRFER 235


>gi|261377615|ref|ZP_05982188.1| amino acid ABC transporter, permease protein [Neisseria cinerea
           ATCC 14685]
 gi|269146368|gb|EEZ72786.1| amino acid ABC transporter, permease protein [Neisseria cinerea
           ATCC 14685]
          Length = 219

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    + +    LT++ +A   V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAIPKFVDAAKLTLELSAYGIVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RTYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+G++AVP+GQ+EA  A+GL   +  R V LPQA    +P + +  L L+K +S+  
Sbjct: 103 EAIRAGILAVPKGQIEAGKAIGLNQFQVFRYVELPQAWAVAVPAIGANVLFLMKETSIVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AVG A+L+ V   II    +  E + +    YL + + ++L       ++ 
Sbjct: 163 AVGIAELLFVTKDIIGMDYKTNEALFLLFASYLIILLPVSLLARWAENRVR 213



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSAYGIVLSLLFGLPVAVVTAYRIRPFYALARTYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|161503950|ref|YP_001571062.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865297|gb|ABX21920.1| hypothetical protein SARI_02042 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 222

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S  + +VL+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTII---LTLKTPFMVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPLLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 38/114 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +  A ++  +           + W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTIILTLKTPFMVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|121593037|ref|YP_984933.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           sp. JS42]
 gi|222109805|ref|YP_002552069.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           ebreus TPSY]
 gi|120605117|gb|ABM40857.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Acidovorax sp. JS42]
 gi|221729249|gb|ACM32069.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax ebreus TPSY]
          Length = 250

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 10/228 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   +   L +          + + S  + +V+      L           L   ++  
Sbjct: 22  FGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVGTLRTLEGRPWTVRLGNAWVEL 81

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV I + Y            +        P F+ +  AL  +T+A IAE VR
Sbjct: 82  F--RNIPLLVHIFVWY--------HVVPSIFPAMKSLPGFVLVVFALGFFTSARIAEQVR 131

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ A+PRGQ  A +ALG T  +  R VLLP A R IIPPLTS+ +N+ KNSS+A AV  
Sbjct: 132 SGIQALPRGQRYAGMALGFTTFQYYRYVLLPMAFRIIIPPLTSETMNVFKNSSVAFAVSV 191

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+L         +T + IE+ L    +Y+  +  I   M  +  +  +
Sbjct: 192 AELTMFAMQAQEETSRGIEVYLAVTALYIISAFAINRIMAFIEKRTRV 239



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWIC 129
           E+ Q       D +Y   +L  +  T  ++   +  A ++G+LVG  R L        + 
Sbjct: 16  EVGQSCFGKNGDITYLDWMLSAWGWTVSVSLLSLAVALVVGSLVGTLRTLEGRPWTVRLG 75

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
             +VE+FRNIP LV IF  Y  V S+ P           +F
Sbjct: 76  NAWVELFRNIPLLVHIFVWYHVVPSIFPAMKSLPGFVLVVF 116


>gi|238019790|ref|ZP_04600216.1| hypothetical protein VEIDISOL_01665 [Veillonella dispar ATCC 17748]
 gi|237863314|gb|EEP64604.1| hypothetical protein VEIDISOL_01665 [Veillonella dispar ATCC 17748]
          Length = 229

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 7/223 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     I V S +LG++L      + R         L +++IS   + G P L
Sbjct: 5   FPQLLNYVHVTVLITVISAILGVILGSII-AIIRLKKVPVLNQLFIVFISF--MRGTPFL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +     +    V P  + +Y   + + AA+ AEI+RS + AV  G
Sbjct: 62  VQLFLIY---FGVPEIMSHMGLNMKNV-PGLVFVYAVFTLHIAAYSAEIMRSSIDAVAPG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           + EAA +LG+T  ++   ++LPQA    IPPLT+  + +LK ++L   VG  D++     
Sbjct: 118 EKEAAKSLGMTEFQSYVRIILPQAFTMSIPPLTNLVIGMLKGTALIFNVGVVDMMRKADL 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   + + +E+ +    IY  L I+++L    L  +  +  K+
Sbjct: 178 MGGNSQRYLELFVDAAIIYGILIIIVSLLGRLLEKRFTVAGKE 220



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 32/76 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +     I   I+G+++   RL    ++  +  V++   R  P LV +F +Y  V  +
Sbjct: 15  TVLITVISAILGVILGSIIAIIRLKKVPVLNQLFIVFISFMRGTPFLVQLFLIYFGVPEI 74

Query: 156 LPIPDHSIVLPFGMFL 171
           +     ++    G+  
Sbjct: 75  MSHMGLNMKNVPGLVF 90


>gi|13474098|ref|NP_105666.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14024850|dbj|BAB51452.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 215

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 14/226 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +    L       + + +FV G ++   A    R    K  + L   YI+ F  
Sbjct: 4   FTLWDIVRNLLLATRWTVLLSLAAFVGGALVG-MAVLFFRISKHKWSRRLASGYIALF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L       G  + P + +  + L+ + +A++AEI RSG+
Sbjct: 61  QGTPLLMQLFLMF---FGLPML-------GLRIEP-WTAAVLGLTFFASAYLAEIWRSGV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRGQ +A  +LGL + +  RL++LPQA      P     + L+K+++L   +GF +L
Sbjct: 110 DALPRGQWDAGASLGLHYLQELRLIILPQAFSITRAPTVGFLVQLIKSTALTSIIGFEEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           V     I N T +  ++  +   I+  +   +  +   L  + A +
Sbjct: 170 VRTSNAINNATFEPFKVYGLVALIFFLMCFPLTQYARSLEKRAAAR 215



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 37/106 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+ +  +   ++G  V   R+S +K    +   Y+ +F+  P L
Sbjct: 7   WDIVRNLLLATRWTVLLSLAAFVGGALVGMAVLFFRISKHKWSRRLASGYIALFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + +F ++  +  +    +       G+                +A 
Sbjct: 67  MQLFLMFFGLPMLGLRIEPWTAAVLGLTFFASAYLAEIWRSGVDAL 112


>gi|332107600|gb|EGJ08824.1| ABC transporter permease [Rubrivivax benzoatilyticus JA2]
          Length = 245

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 2/165 (1%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           +    +  PLL    F  FGLP L+   L   L  + P       +     S EF++   
Sbjct: 58  YLSLFRNTPLLVQLFFWYFGLPALLPEDLLPWL--NTPHELALGGLVLRWPSFEFLAAVT 115

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  Y+AA++ E +RSGL  VP GQ EA IALGLT  +A R V+LPQA+R  +PPL  QY
Sbjct: 116 GLVFYSAAYVGEDIRSGLRGVPAGQREAGIALGLTPWQALRHVVLPQALRIALPPLLGQY 175

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           +N+LKN+SL +A+G  +L         +T +  ++  +   +Y+ 
Sbjct: 176 MNILKNTSLGMAIGLLELSYRTRQAEAETWKTFQVYGVATLLYVV 220



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G+V T W     +  AT++G L+ A R S    +     VY+ +FRN P LV 
Sbjct: 11  YLGWLLDGWVMTLWTTAIVVAAATLLGALLAAARESGRPALTRATGVYLSLFRNTPLLVQ 70

Query: 145 IFFLYKSVLSVLPI 158
           +FF Y  + ++LP 
Sbjct: 71  LFFWYFGLPALLPE 84


>gi|317401749|gb|EFV82368.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 222

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 97/236 (41%), Gaps = 14/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F               +    ++  F  V G+ L + A   +R    +  +A    
Sbjct: 1   MAYQFDFASVFDYTPVLIKGIGVTVELIAFGAVAGVALGI-ACAWARTQGPRWLRAPVTA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   ++   P L+ +   +           F          E  +  +A++    A+ A
Sbjct: 60  YVE--VVRNTPFLIQLFFVF-----------FGLPSLGVQFSEMQAACLAMALNLGAYSA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  A+  I P L+SQ + ++  S++  
Sbjct: 107 EIIRAGIDATPKGQYEAGASLAMTRLQVFRHVVLKPALARIWPALSSQIVIVMLGSAVCS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   DL      I ++  +A E+  +   IYL L++++   +     ++  K  +
Sbjct: 167 QIAAEDLTFAANFIQSRNFRAFEVYFVTTGIYLVLAVLLRQLLRMTGRRLFRKAAR 222



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 35/95 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S   Y   ++ G   T  L   G +    +G      R    + +      YVEV R
Sbjct: 6   DFASVFDYTPVLIKGIGVTVELIAFGAVAGVALGIACAWARTQGPRWLRAPVTAYVEVVR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P L+ +FF++  + S+             M LN
Sbjct: 66  NTPFLIQLFFVFFGLPSLGVQFSEMQAACLAMALN 100


>gi|311106550|ref|YP_003979403.1| glutamine transporter permease GlnP [Achromobacter xylosoxidans A8]
 gi|310761239|gb|ADP16688.1| glutamine transport system permease protein GlnP [Achromobacter
           xylosoxidans A8]
          Length = 198

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 13/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              KI  +    G +L   +  ++R +      A+  +Y+   +I G P +V +   Y  
Sbjct: 1   MTIKITFWGLFGGFLLGALSG-VTRAYGHPVLSAIAQVYV--AVIRGTPIVVQVMFIY-- 55

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P+L        +       +  + L   + A+I+EIVR  L++V +G  EA  A+G
Sbjct: 56  -FALPLL-------ANIRVDAEWAAIVTLIINSGAYISEIVRGALLSVHKGLKEAGQAMG 107

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   K    ++ P A R +IPPL +Q +  LK+SSL + +G A+L   G  I+    +A+
Sbjct: 108 LPFHKILLHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVIGVAELTRQGQEIMASNFRAV 167

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           EI      +YL L+ ++AL ++ +  ++ +
Sbjct: 168 EIWSAVAIVYLILTGLMALALHLVERRMRI 197


>gi|258620246|ref|ZP_05715285.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262164885|ref|ZP_06032623.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus
           VM223]
 gi|258587604|gb|EEW12314.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262027265|gb|EEY45932.1| arginine ABC transporter permease protein ArtM [Vibrio mimicus
           VM223]
          Length = 222

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      + T+ ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLLEGLGTSLQLTAASLLVGCILSLLMT-ISLVMRTPIVHWFSRALITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +     AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMFALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  +    YL+++  + L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGVAGAFYLTVNGALTLLFRQIEKK 215



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 40/113 (35%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G   +  L  + ++   I+  L+    +    +V W  R  + +F   P 
Sbjct: 2   KEQHLWQLLEGLGTSLQLTAASLLVGCILSLLMTISLVMRTPIVHWFSRALITLFTGTPL 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           LV IF +Y        I +  + +           +    T   + ++F  +F
Sbjct: 62  LVQIFLVYYGPGQFEWIRESVLWVWLSQPWFCAMFALALNTAAYSTQLFKGAF 114


>gi|269120727|ref|YP_003308904.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614605|gb|ACZ08973.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 215

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 16/222 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + LS     +       + S  LGI+ +L  T  S    +            T++  G P
Sbjct: 9   QILSSLPNVIIVYTVTALISLPLGIIGALAYTGNSVIIKKSIS-------FYTWIFRGTP 61

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ +   Y   +  P L        + V     +  I       A++ EI+RSGL ++ 
Sbjct: 62  LILQLFFIY---YGLPTLTN-----NAVVLDRMPAALITFIINYTAYLIEIIRSGLESID 113

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA  LG ++ K    +LLPQA+R ++P L ++ + L+K+++L   +   +++   
Sbjct: 114 KGQDEAAKVLGYSYFKKIWYILLPQAIRRVLPSLGNEAITLVKDTALIYIISLTEILKTT 173

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             I ++    I        IYL LS +I      +  +  ++
Sbjct: 174 KEIASR-YSIITPYFYAGLIYLGLSFLIDRIFKNMEKRNKVR 214


>gi|116248725|ref|YP_764566.1| putative permease component of ABC transporter protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253375|emb|CAK11763.1| putative permease component of ABC transporter protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 221

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 14/229 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             M + +  L+          ++ +    L +V++  A  L R       +AL   YI  
Sbjct: 1   MPMSVWSGYLTLILEGALVTLELTIMGSALALVMAFLAG-LGRLSRFFAVRALATAYIEF 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G    V +   + ++F  P         G T++P   +  +AL     A+ AE+VR
Sbjct: 60  F--RGTSIFVQL---FWVYFVLP-------FAGLTLTP-LQAGVLALGLNVGAYAAEVVR 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + AV R Q EA IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +  
Sbjct: 107 GAVKAVGREQSEACIALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISL 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            D+      +  QTG  +      + +Y  ++  I+  M  L  ++A  
Sbjct: 167 TDMTFQAQVVRAQTGNTLVPFATILILYFLMASAISATMRWLERRMARS 215



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 57/150 (38%), Gaps = 3/150 (2%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +P +  S Y T IL G + T  L   G   A ++  L G GRLS    V  +   Y+E F
Sbjct: 1   MPMSVWSGYLTLILEGALVTLELTIMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R     V +F++Y  +                + LN    +   +     A     S   
Sbjct: 61  RGTSIFVQLFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEAC 120

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              ++L  +R  R  H    +ALPL+  + 
Sbjct: 121 ---IALNLSRYQRMRHVILPQALPLMLPTF 147


>gi|330808727|ref|YP_004353189.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327376835|gb|AEA68185.1| putative amino acid ABC transporter, permease component
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 220

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 14/227 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +               T+ +  + + VLG ++ L A  L   +     +A    Y+   
Sbjct: 7   WLHELWVARDTLWAGFLTSVQCSLLAIVLGTLIGLAAG-LVLTYGRTWMRAPFRFYVDLI 65

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +  LVL            +               F +  + L+ +  + +AEIVR 
Sbjct: 66  RGTPVFVLVLACFYMAPALGWQIG-------------AFQAGVLGLTLFCGSHVAEIVRG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L A+PRGQMEA+ A+GLT  ++   VLLPQA+R I+P   +    ++K S+L   +G A
Sbjct: 113 ALQALPRGQMEASQAIGLTFYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVA 172

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L+     II +T   +E  L   F++  ++  I L    +  ++AL
Sbjct: 173 ELLLSTQQIIARTFMTLEFYLFAGFLFFIINYAIELLGRHIEKRVAL 219


>gi|218677804|ref|ZP_03525701.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 154

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 8/161 (4%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   + +++   +L          +   ++++ I L+ + +A++ EI R  + AVPRGQ
Sbjct: 2   LLMQLFVVYYGLALL--------GLMLDAWVAVAIGLTLHASAYLGEIWRGSIEAVPRGQ 53

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL L +    R V+LPQA+R  +P      + L+K +SLA  VGF +L   G  I
Sbjct: 54  TEAAKALSLRYVSRMRDVILPQALRISLPATIGFLVQLIKGTSLASIVGFTELTRAGNII 113

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            NQ  Q + +  +   +Y  +   + +   RL  K A   +
Sbjct: 114 SNQIFQPLTVFGVVGILYFLMCCPLTILGARLERKFAASAR 154


>gi|209546625|ref|YP_002278543.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537869|gb|ACI57803.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 235

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 91/172 (52%), Gaps = 2/172 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+         +PTLV + L Y   F     G   ++  S  + E +   I L    AA
Sbjct: 57  PLVAAYVSYHRNVPTLVQLMLWYFGIFTLMPSGLGEWL--SVHNAEAIFAVIGLGLCQAA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + +E +RSG+ +V  GQMEAA ALG  +  A R V++PQ +R+ +PPL +  ++L KNSS
Sbjct: 115 YFSEDLRSGVRSVGPGQMEAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLFKNSS 174

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LAV +G ++L      I N + +  EI LI   +YL  S++I      L+ +
Sbjct: 175 LAVIIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVIMSIGAYLSMR 226


>gi|327468420|gb|EGF13905.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 228

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +L    L + +  +  +   ++Y++         L+L      
Sbjct: 18  PVTLIIMVVAILLSFIPALLL-ALGQIYKVRGFRTFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +                   +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     + + Q 
Sbjct: 137 GLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKDITALAKIEASHSYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   IYL +  +I      L  + AL
Sbjct: 197 SESYLVIFVIYLIICGLIQWMFRGLEKRYAL 227



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 35/93 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + I   L+  G++   +       VY+   R  PP+++I F Y
Sbjct: 14  LKGIPVTLIIMVVAILLSFIPALLLALGQIYKVRGFRTFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
               S+L     S+     +F  N       + 
Sbjct: 74  SLFPSLLNQIFKSLGSQVDVFKFNPLYYAFIIY 106


>gi|310766982|gb|ADP11932.1| Glutamate/aspartate transport system permease [Erwinia sp. Ejp617]
          Length = 245

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + V ++++ + +  F   L R    +   +L
Sbjct: 6   NWGIFLQEAPFGNTTYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGIL-RTVPGRLLSSL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
              Y+  F    +P +V   + Y  +    P      F      + +F     I L  +T
Sbjct: 65  GTCYVELF--RNVPLIVQFFIWYLVVPELLPEDIGMWFKSEIDPNIQFFTCSVICLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+PP+TS+ LNL+KN
Sbjct: 123 AARVCEQVRAAIQSLPGGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y++++ +I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAYESFSAITLAYVAINAVIMLLMGLVERKVRL 239



 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   +  GF  T  ++    I A  +G+  G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTTYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R    +L++ +   YVE+FRN+P +V  F  Y  V  +LP 
Sbjct: 53  LRTVPGRLLSSLGTCYVELFRNVPLIVQFFIWYLVVPELLPE 94


>gi|309379288|emb|CBX22061.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 219

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  L L+K +S+  
Sbjct: 103 EAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +I 
Sbjct: 163 AVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIR 213



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|264680312|ref|YP_003280222.1| glutamate/aspartate transporterpermease gltK [Comamonas
           testosteroni CNB-2]
 gi|299532722|ref|ZP_07046110.1| glutamate/aspartate transport systempermease protein gltK
           [Comamonas testosteroni S44]
 gi|262210828|gb|ACY34926.1| glutamate/aspartate transport systempermease protein gltK
           [Comamonas testosteroni CNB-2]
 gi|298719357|gb|EFI60326.1| glutamate/aspartate transport systempermease protein gltK
           [Comamonas testosteroni S44]
          Length = 223

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 13/233 (5%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L +  F  +   +F    +  +  + V + + GI        L R   +K       +Y
Sbjct: 4   NLDWSFFSWDLFSNFVLKGLYFSVSLTVIATLGGIFFGTLL-ALMRLSGKKWLDLPATIY 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++     G+ ++ L+ +        P+L                S  I    + AA+ +E
Sbjct: 63  VN-----GMRSIPLVMVILWFFLLMPMLIGKPIGAE-------TSAIITFVAFEAAYFSE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++PRGQ+ A  ALG+T+ +  RLV+LPQA R+++P L +Q + L +++SL  A
Sbjct: 111 IMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLVYA 170

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G  D++          G+ IE  L     Y  +   ++ F+ RL+ KIA+  
Sbjct: 171 IGAYDMLKGFEIAGKNFGRPIESYLAAAVTYFVICFALSWFVKRLHKKIAIIR 223



 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 2/155 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  L     +     GTL+   RLS  K +     +YV   R+IP ++VI + +
Sbjct: 20  LKGLYFSVSLTVIATLGGIFFGTLLALMRLSGKKWLDLPATIYVNGMRSIPLVMVILWFF 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +  ++  P  +       F+      F  +       I       G  L +   +  R
Sbjct: 80  LLMPMLIGKPIGAETSAIITFVAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMR 139

Query: 210 H--FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                +     LP+L   T ++F   +LV     Y
Sbjct: 140 LVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAY 174


>gi|33596742|ref|NP_884385.1| ABC transporter transmembrane protein [Bordetella parapertussis
           12822]
 gi|33600510|ref|NP_888070.1| ABC transporter transmembrane protein [Bordetella bronchiseptica
           RB50]
 gi|33568109|emb|CAE32022.1| Putative ABC transport system, integral membrane protein
           [Bordetella bronchiseptica RB50]
 gi|33573443|emb|CAE37428.1| Putative ABC transport system, integral membrane protein
           [Bordetella parapertussis]
          Length = 384

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 20/234 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            ++        +T+  +    VFS  +GIVL+L      R       +    + I     
Sbjct: 166 HVSTDLWGGILVTLVVSLVGIVFSLPIGIVLAL-----GRRSELPFVRLASTVAIELGRG 220

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                  LI + +  +   P+     F+         +   + ++ + +A++AE+VR GL
Sbjct: 221 VP-----LITVLFMFNTMLPL-----FLPEGLRPDRLLRPLVGVTLFASAYMAEVVRGGL 270

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ E A +LGL + + T L++LPQA+R ++P + + ++ L K+++L   VG  DL
Sbjct: 271 QALPKGQYEGAQSLGLGYWQTTFLIVLPQALRIVVPGIVNTFIGLFKDTTLVAMVGILDL 330

Query: 350 VSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + V    IN    A  +          F Y +    ++ +   +   +A  EK+
Sbjct: 331 LKVVEVAINDPAWATPVTRYTGYAFLAFFYCACCYAMSRYSRSVERTLARSEKR 384



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  ++  G++ +  IG ++  GR S    V     V +E+ R +P + V+F  
Sbjct: 171 LWGGILVTLVVSLVGIVFSLPIGIVLALGRRSELPFVRLASTVAIELGRGVPLITVLFMF 230

Query: 149 YKSVLSVLPIPDHSIVL 165
              +   LP       L
Sbjct: 231 NTMLPLFLPEGLRPDRL 247


>gi|300313149|ref|YP_003777241.1| glutamate/aspartate ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300075934|gb|ADJ65333.1| ABC-type glutamate/aspartate transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 231

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 7/233 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +  R   +   T      I  FS + G ++      + R    K    +   Y++
Sbjct: 4   NFDFDVIQRSWFYLFTTGLKFTLILTFSAMAGGIILGTLLAMMRLSSNKPLSFIATTYVN 63

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEI 284
                   ++ L+ + +  +F  P +G +       +    F S  I    + AA+  EI
Sbjct: 64  LIR-----SIPLVLVIFWFYFLVPFIGAWMIGASEPIQVGAFQSALITFILFEAAYYCEI 118

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ ++PRGQ+ A  A+G+ + +    V+LPQA R++ P L +Q + L ++ SL   +
Sbjct: 119 MRSGIQSIPRGQVFAGYAIGMNYWQMMGNVVLPQAFRNMTPILLTQTIVLFQDVSLVYVL 178

Query: 345 G-FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G   D V+    I  + G+ +E+ L    +Y  LS  ++  + R   KIA+  
Sbjct: 179 GSVPDFVTSASKIAQRDGRLVEMYLFVAVVYFVLSFGLSTLVKRFQKKIAIIR 231



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 40/76 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+      G   T  L FS M    I+GTL+   RLS+NK +++I   YV + R+IP ++
Sbjct: 13  SWFYLFTTGLKFTLILTFSAMAGGIILGTLLAMMRLSSNKPLSFIATTYVNLIRSIPLVL 72

Query: 144 VIFFLYKSVLSVLPIP 159
           VIF+ Y  V  +    
Sbjct: 73  VIFWFYFLVPFIGAWM 88


>gi|195973408|gb|ACG63351.1| allantoate transport membrane protein [Klebsiella oxytoca M5al]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 14/223 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   +    L       + + +F LG  L      L R    +  K L   YI  F  
Sbjct: 4   FTDWDIVRNLLLAGRWTVLLSLVAF-LGGALVTLPLLLLRMTGGRQVKRLIRGYIELF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ YT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGIDVSAWTAASLALTLYTSAFLLDIWFGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+  LGL+  +    V+ PQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 RALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  L   +A +   L  K 
Sbjct: 170 TKAGTMLTNVTYQPFKVFALVALGYFILCYPLARYSRYLENKF 212


>gi|260597070|ref|YP_003209641.1| glutamate/aspartate transport system permease GltK [Cronobacter
           turicensis z3032]
 gi|260216247|emb|CBA29163.1| Glutamate/aspartate transport system permease protein gltK
           [Cronobacter turicensis z3032]
          Length = 225

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 6/229 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  F        + +    +    KI V + + GIV       + R    K        
Sbjct: 1   MMYEFDWGSIVPSMPYLLAGLVITLKITVTAVIFGIVWGTLL-AVMRLSAFKPFAWFATA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++ F       LV++ L + L    P + Q             +S  +A S + AA+ +
Sbjct: 60  YVNVFRSIP---LVMVLLWFYL--IVPGILQDVLGISPKTDIRLISAMVAFSMFEAAYYS 114

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL  
Sbjct: 115 EIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVY 174

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 VLSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSWLKKR 223



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 36/66 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + +I   + GTL+   RLSA K  AW    YV VFR+IP ++V+ +
Sbjct: 16  YLLAGLVITLKITVTAVIFGIVWGTLLAVMRLSAFKPFAWFATAYVNVFRSIPLVMVLLW 75

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 76  FYLIVP 81


>gi|126642341|ref|YP_001085325.1| amino acid ABC transporter permease [Acinetobacter baumannii ATCC
           17978]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 87/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A + V S  +G +L++    L+R       +    +++ T++  G P  + + + Y  
Sbjct: 6   MTAWLLVLSIGIGFLLAVPL-SLARVSENIWLRGP--VWLFTYVFRGTPLYIQLLIIYSG 62

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    + +   +  +          +A +  T A+  EI    + ++P G++EAA A G
Sbjct: 63  IYSFDYIHEHQTLD-AFFREGINCTILAFALNTGAYTTEIFAGAIRSIPHGEIEAAQAFG 121

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  K    +++P  +R  +P   ++ + +L  +++A      D++ +   +   T    
Sbjct: 122 MSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILKIARDVNAATYDTF 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
               I   +Y  L+ ++     +L  +
Sbjct: 182 SAFGIAAVLYAVLAFILIWIFRKLEKR 208


>gi|72160709|ref|YP_288366.1| amino acid ABC transporter inner membrane subunit [Thermobifida
           fusca YX]
 gi|71914441|gb|AAZ54343.1| amino acid ABC transporter, inner membrane subunit [Thermobifida
           fusca YX]
          Length = 212

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 23/231 (9%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F   +    L+   +T+      +  + VLG+ ++L           +       +
Sbjct: 3   WDWEFTGRIIPDLLNGLAVTVQATVLGYTLALVLGLAVALVR---------RIPVIGTAV 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +     I   P LV +   + L                     F      L  + AA+ A
Sbjct: 54  FAVMEFIRCTPLLVQLVFVFSL--------------APNTLSAFTIGVAVLGVHYAAYTA 99

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RSG+ AVP GQ EA  AL L   +    V+LPQA+R +IPPL +  + + K++ L  
Sbjct: 100 EVYRSGIEAVPAGQWEACRALSLPLHRTWGAVILPQAIRRVIPPLGNYLIAMFKDTPLLF 159

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+   +L+     I     + +E + +    +L +S+  A+ + +L  + A
Sbjct: 160 AITVGELMYQASQIGGVYFRYLEAMTLVGLFFLLVSVPSAILIRQLERRYA 210


>gi|326794956|ref|YP_004312776.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326545720|gb|ADZ90940.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 456

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 14/221 (6%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +     I  FS  + I + +    L R         L L+ I       L T++ +
Sbjct: 247 RWGGLFLTFIIAGFSIAMAIPVGVLL-ALGRRSKLPVIHWLSLVVIELVRSVPLITVLFM 305

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A+   L    P   +FN         +   + +A+  +  A++AE +R GL A+P+GQ E
Sbjct: 306 AVT-LLPIFLPSDVEFN---------KLSQVLVAVCLFAGAYMAENIRGGLQAIPKGQFE 355

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA  LG  + +   L++LPQA+R +IP + + +++LLK+++L   +G  D++ +   I N
Sbjct: 356 AATTLGFGYWQTMFLIVLPQALRMMIPNIMTSFISLLKDTTLVSIIGLFDIMLMARNIAN 415

Query: 359 Q---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                G   E +++   ++  L   ++ +   L  ++ +  
Sbjct: 416 DKDWVGLHTEPLVLIAVLFFVLCYSMSQYSLNLEKRLKVDR 456



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   TF +A   +  A  +G L+  GR S   ++ W+  V +E+ R++P + V+F   
Sbjct: 248 WGGLFLTFIIAGFSIAMAIPVGVLLALGRRSKLPVIHWLSLVVIELVRSVPLITVLFMAV 307

Query: 150 KSVLSVLP 157
             +   LP
Sbjct: 308 TLLPIFLP 315


>gi|312862890|ref|ZP_07723130.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
 gi|311101750|gb|EFQ59953.1| ABC transporter, permease protein [Streptococcus vestibularis
           F0396]
          Length = 213

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T+     + V S  LGIVL+            K    L  LY+
Sbjct: 1   MSYVLEVLPALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQ-----IKFKPLNWLLTLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                 V     +  +A +   AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYYV-----------LPSVGIVFDRLPAAILAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+    T  N+    +  + +   IYL L  ++ +    +  K 
Sbjct: 163 GVGDLLLESRTAANRDA-TLAPMFVAGAIYLILVGVVTVASKHIEKKF 209



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T  + F  ++ +  +G ++        K + W+  +YV + R  P L+ + F
Sbjct: 10  ALLNGAVVTLQVFFIVIVLSIPLGIVLAFLMQIKFKPLNWLLTLYVWIMRGTPLLLQLIF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  + SV  + D          LN              A 
Sbjct: 70  VYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAI 110


>gi|293603168|ref|ZP_06685601.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
 gi|292818399|gb|EFF77447.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Achromobacter piechaudii ATCC 43553]
          Length = 221

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +A   V S +LG+V++L      R +  +  +         F I  +  + ++ +   +
Sbjct: 25  LSAITAVSSILLGLVIALL-----RLYGPRWLR-----MALVFYIDSMRAIPVLVVLVWI 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+L   NF         F +  +AL+ + AA+ AE++R+G+ +V  GQM A +ALG
Sbjct: 75  YFAFPLLAGVNF-------APFWAALVALTLHIAAYSAEVIRAGIESVRPGQMRAGLALG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A R ++LPQA   ++P   S     +K++++A  +   +L+    TI  Q+ + I
Sbjct: 128 MSRAQALRKIILPQATIRMLPAFGSVLTVAIKDTAIATVIAVPELMHKAETIAGQSYRPI 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E+    +  Y  +   +   ++RL  + A
Sbjct: 188 EVFTAVIVAYFVILFPVTRGVDRLYQRYA 216



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 33/87 (37%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++           G   T  L+    + + ++G ++   RL   + +      Y++  R
Sbjct: 4   DFSPIVENWRFFAGGLGITIALSAITAVSSILLGLVIALLRLYGPRWLRMALVFYIDSMR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            IP LVV+ ++Y +   +  +      
Sbjct: 64  AIPVLVVLVWIYFAFPLLAGVNFAPFW 90


>gi|158321613|ref|YP_001514120.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158141812|gb|ABW20124.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 213

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 15/228 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M    R L      M    +IF+ +  L I L L    L R    K    +   YI   +
Sbjct: 1   MTYIYRILPAIASGMFATIEIFIVTLCLSIPLGLVV-ALGRLSTVKIINRVIQFYI--LI 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P L+ +   +           F             +  +AL+   AA+ AEI R G
Sbjct: 58  MRGTPLLLQLVFVF-----------FGLPYVGITLDRKTAALLALTLNYAAYFAEIFRGG 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ +GQ EAA+ LG +  +  + ++LPQ  + ++P + ++ + L+K++SL   VG  +
Sbjct: 107 IDSINQGQYEAAMVLGFSKYRTIQRIILPQVFKVVLPSVGNEVITLVKDTSLVYVVGLGE 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+  G    N+    +  ++    +YL L  ++      L  K +   
Sbjct: 167 LLRAGKIAANRDASLLP-LVAVGMVYLILISILTEVFKGLERKYSYYR 213



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 37/90 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
               AI  G   T  +    +  +  +G +V  GRLS  K++  + + Y+ + R  P L+
Sbjct: 6   RILPAIASGMFATIEIFIVTLCLSIPLGLVVALGRLSTVKIINRVIQFYILIMRGTPLLL 65

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            + F++  +  V    D        + LN 
Sbjct: 66  QLVFVFFGLPYVGITLDRKTAALLALTLNY 95


>gi|50120252|ref|YP_049419.1| glutamate/aspartate transport system permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610778|emb|CAG74223.1| glutamate/aspartate transport system permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 246

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             LS   +T+  +   ++ +F++G +  +  T  +R        + +  + +PL+     
Sbjct: 24  WILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLSSIGTCYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+ + +      +     QF           F+S  I L  +TAA + E VR+
Sbjct: 84  WYLVVPELLPVNIGMWFKAELDPNIQF-----------FLSSMICLGLFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+PPLTS+ LNL+KNS++A  +G  
Sbjct: 133 GIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M  +  K  L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFTAITLAYVGINAVIMLIMQVVERKTRL 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/80 (35%), Positives = 40/80 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   IL G   T  L+    I A +IG+L G  R   N+ ++ I   YVE+FRN+P +V
Sbjct: 20  TYLGWILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLSSIGTCYVELFRNVPLIV 79

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
             F  Y  V  +LP+     
Sbjct: 80  QFFTWYLVVPELLPVNIGMW 99


>gi|121604975|ref|YP_982304.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593944|gb|ABM37383.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 227

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +S+     +      L+    T+  +    VF F+LG+        L++  H      + 
Sbjct: 3   YSLDFSAPLAYWPELLAGAWTTLALSLSATVFGFLLGV-----FCALTKTGHSVWLARVA 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             Y+   LI   P LV I + Y           F           F +  IAL     A+
Sbjct: 58  SAYVE--LIRNTPLLVQIFIVY-----------FGLSSLGLQVGAFTAATIALVVNVGAY 104

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EIVR+G+ ++PRGQMEAA  + L+  +  R V+LP A+  + P LTSQY+ L+  SS+
Sbjct: 105 TSEIVRAGIDSIPRGQMEAAECMALSRWQTLRHVVLPPAIERVYPALTSQYVLLMLASSI 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +   +L +V   I + T +++E  LI    YL +S+++    
Sbjct: 165 CSQISAEELTAVANRIQSDTFRSVETYLIVAGAYLLMSLVMRAIF 209



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 41/96 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++  +Y   +L G   T  L+ S  +   ++G      +   +  +A +   YVE+ 
Sbjct: 5   LDFSAPLAYWPELLAGAWTTLALSLSATVFGFLLGVFCALTKTGHSVWLARVASAYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P LV IF +Y  + S+             + +N
Sbjct: 65  RNTPLLVQIFIVYFGLSSLGLQVGAFTAATIALVVN 100


>gi|323261662|gb|EGA45237.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
          Length = 219

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 6/223 (2%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M  +   L +    +    KI V + V+GIV       +      +     P+ + +   
Sbjct: 1   MEFDYPSLPYLLAGLVITLKITVTAVVVGIVWGTILAVM------RLSSFAPIAWFAKAY 54

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +    ++ L+ +    +   P   Q             +S  +A S + AA+ +EI+R+G
Sbjct: 55  VNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAG 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   +  AD
Sbjct: 115 IQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLAD 174

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 FFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 217



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 10  YLLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLW 69

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 70  FYLIVP 75


>gi|313900722|ref|ZP_07834215.1| putative arginine ABC transporter, permease protein ArtQ
           [Clostridium sp. HGF2]
 gi|312954784|gb|EFR36459.1| putative arginine ABC transporter, permease protein ArtQ
           [Clostridium sp. HGF2]
          Length = 213

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + L    +    +T+       V SFVL   L +   RLSR+    T     ++  
Sbjct: 1   MDFFIQLLPAFVEGLKITLFFWVVTLVGSFVLA--LPMVYVRLSRNAVVST-----IVRF 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y   F  P L                +  +A      A+  EI
Sbjct: 54  YIYIMRGTPLLLQLMFVY---FGLPYL--------GIRLDRTTAAILAFLLNYTAYFTEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+ ++  GQ EAA  LG ++      +LLPQA+R+ IP   ++ L LLK++ L   +
Sbjct: 103 LRGGIQSIDEGQKEAAKLLGYSNSYTFLHILLPQALRNCIPSFINESLTLLKDTCLVSIL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +L+     I   T       +    IYL L++ I+  +N L  ++
Sbjct: 163 GIDELLRYAK-IAAGTYATGLPFIYVGVIYLVLNMPISRGLNYLEKRL 209



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A + G   T +     ++ + ++   +   RLS N +V+ I R Y+ + R  P L+ + F
Sbjct: 10  AFVEGLKITLFFWVVTLVGSFVLALPMVYVRLSRNAVVSTIVRFYIYIMRGTPLLLQLMF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSF 178
           +Y  +  +    D +        LN      
Sbjct: 70  VYFGLPYLGIRLDRTTAAILAFLLNYTAYFT 100


>gi|88855905|ref|ZP_01130567.1| amino acid ABC transporter, permease [marine actinobacterium
           PHSC20C1]
 gi|88814772|gb|EAR24632.1| amino acid ABC transporter, permease [marine actinobacterium
           PHSC20C1]
          Length = 216

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 91/199 (45%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ ++L  T L+  F       +  L +S    F     V +A+   +     +   +  
Sbjct: 17  GLRVTLLLTFLTLFFSVILAAIIVALKMSKVRAFSAFATVYLAVVRGVPLIALLFVIYFG 76

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           I        F +  I LS +++A++AEI RSG+ +V  GQ+EA+ +LG++       V+ 
Sbjct: 77  IVSIVKVDAFTAATIGLSVHSSAYVAEIFRSGINSVHSGQVEASRSLGMSRAATMIRVVA 136

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R +IP L +Q +  LK+S++A  +   +L      +   T Q +    I    YL+
Sbjct: 137 PQALRVVIPALVNQAIISLKDSAVASFITVDELFMSAQRLSAATFQPLTYYAIVSLYYLA 196

Query: 377 LSIMIALFMNRLNAKIALK 395
           +  ++     R+      +
Sbjct: 197 VVGVMTYLSGRVERYFKKR 215


>gi|308235035|ref|ZP_07665772.1| ABC transporter, permease protein [Gardnerella vaginalis ATCC
           14018]
          Length = 367

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 108/254 (42%), Gaps = 14/254 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+VI  L +           S  L      +     F    +    K  + + V+G ++ 
Sbjct: 35  LIVIALLLRLSNPPEGENQLSWDLWNPAVESEAWTDFYLPGLWMTLKASLLA-VVGSIVF 93

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                L R       +++  + +  F       L++I L     F               
Sbjct: 94  GLLFGLLRLLPNLFLRSISAVVVE-FCRAVPVLLLMIFLWRGFAF------------AGI 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               + ++ ++L  Y  + +AE+VRSG+  +P GQ EA++ALGL+  ++   + +PQA+ 
Sbjct: 141 SGASYWAVVLSLILYNGSVVAELVRSGVGNLPNGQREASLALGLSQYQSLTQIEMPQAII 200

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++P   +Q + +LK+++L   + + DL+     + +     ++ + +   +Y  +   +
Sbjct: 201 AMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFNILQTLTVAAVVYFLICWAL 260

Query: 382 ALFMNRLNAKIALK 395
           + F   L +K++ +
Sbjct: 261 SWFAEWLPSKLSSR 274



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 62/173 (35%), Gaps = 17/173 (9%)

Query: 1   MIKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG 60
           M K   K++       K L  +R+ NI   ++ AL++  + L       +N  +    L 
Sbjct: 1   MAKKQEKSLLFDAPGPKALKKIRIANIVACVVFALIVIALLLRL-----SNPPEGENQLS 55

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
              L   A               ++    L G   T   +   ++ + + G L G  RL 
Sbjct: 56  WD-LWNPA-----------VESEAWTDFYLPGLWMTLKASLLAVVGSIVFGLLFGLLRLL 103

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            N  +  I  V VE  R +P L+++ FL++              +   + L N
Sbjct: 104 PNLFLRSISAVVVEFCRAVPVLLLMIFLWRGFAFAGISGASYWAVVLSLILYN 156


>gi|238027408|ref|YP_002911639.1| Polar amino acid ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237876602|gb|ACR28935.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 248

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 16/234 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF------ 227
             + FP L       I      LG+                T +  P    + F      
Sbjct: 1   MPIDFPFLLDTMRQLIAAVPTTLGLFFLSLVLGGLLSLVIVTLRVSPHWLPNRFARAYIL 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAE 283
           +  G P L+ + L Y        LGQF  I  S + P     ++   ++L+  TA + AE
Sbjct: 61  VFRGSPLLIQMFLVYY------GLGQFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R GL+AVP GQ+EA  A+GL+     R V+ P A+R  +P  +++ + L+K+++LA  
Sbjct: 115 IIRGGLMAVPVGQIEAGQAIGLSGFALLRRVIGPIALRQCLPAYSTEAVLLVKSTALASL 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V   ++  V   II QT +  E+      IYL L+  +   +  + A+++   +
Sbjct: 175 VTVWEVTGVAQQIIQQTYRTTEVFACAALIYLFLNFFVVRVLGCVEARLSRHLR 228


>gi|70729566|ref|YP_259304.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68343865|gb|AAY91471.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 239

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 2/233 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L    F +    S           + +    +G+ L L A  L+     +  +A    + 
Sbjct: 5   LSLLSFASGGWGSALLAGALVTIALALACVPIGLPLGL-AVALAARSKNRWARAWATTFS 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F       L L+ + Y        +       G      F++  IA S   AAF +EI
Sbjct: 64  TVFRGL-PELLTLLIIYYGCQIAAQKILGALGYPGEVAINTFVAAMIAFSLVFAAFSSEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
             +    +P+GQ EAA AL L+ R     VLLPQ  R  +P L++ +L+LLK++SL   +
Sbjct: 123 WLAAFKTLPKGQYEAARALSLSRRTTFNRVLLPQLTRIALPGLSNNWLSLLKDTSLVSTI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              DL+      ++ T + +    +  F YL  S +     + L  +    ++
Sbjct: 183 SLVDLMRQTNLAVSVTKEPMLFYSVACFGYLFFSALSGHLFSFLERRFNRAQR 235



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           + +A+L G + T  LA + +     +G  V     S N+        +  VFR +P L+ 
Sbjct: 15  WGSALLAGALVTIALALACVPIGLPLGLAVALAARSKNRWARAWATTFSTVFRGLPELLT 74

Query: 145 IFFLYKS 151
           +  +Y  
Sbjct: 75  LLIIYYG 81


>gi|149365485|ref|ZP_01887520.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CA88-4125]
 gi|165925373|ref|ZP_02221205.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937693|ref|ZP_02226255.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|167422564|ref|ZP_02314317.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167468411|ref|ZP_02333115.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis FV-1]
 gi|218929695|ref|YP_002347570.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CO92]
 gi|229838161|ref|ZP_04458320.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229898728|ref|ZP_04513873.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|115348306|emb|CAL21237.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CO92]
 gi|149291898|gb|EDM41972.1| putative glutamate/aspartate transport system permease [Yersinia
           pestis CA88-4125]
 gi|165914443|gb|EDR33058.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922980|gb|EDR40131.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|166958578|gb|EDR55599.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|229688276|gb|EEO80347.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694527|gb|EEO84574.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Yersinia pestis biovar Orientalis str.
           PEXU2]
          Length = 246

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+ + L      +     QF           F+S
Sbjct: 65  GACYVELFRNVPLIVQFLTWYLVVPELLPVNLGTWFKSELAPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLTQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  ++ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVEMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N++++ I   YVE+FRN+P +V     Y  V  +LP+   + 
Sbjct: 53  LRTVPNRILSGIGACYVELFRNVPLIVQFLTWYLVVPELLPVNLGTW 99


>gi|239945339|ref|ZP_04697276.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239991796|ref|ZP_04712460.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291448801|ref|ZP_06588191.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
 gi|291351748|gb|EFE78652.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
          Length = 298

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 26/257 (10%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L +  ++   +                  +    L     T+   A   V S  LG VL
Sbjct: 43  ILALFGWIVYLLFDTDQFTAQKWTPFEYKGIQELLLRGLGNTLKAFAYAAVLSLALGAVL 102

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           ++      R    +  + +  L +  F                     PVL    FI  +
Sbjct: 103 AV-----GRLSEHRVLRWISTLLVEFFR------------------AMPVLVMIFFIFVA 139

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +L   L+ Y  + +AE+ R+G+ AV RGQ EAA ALG+   + T  VL PQA+
Sbjct: 140 LKVQPLPALVAGLTLYNGSVLAEVFRTGINAVDRGQREAAYALGMRKTQVTAYVLAPQAV 199

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSL 377
           R+++P + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ +
Sbjct: 200 RAMLPTIISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGM 259

Query: 378 SIMIALFMNRLNAKIAL 394
            ++++ F   +  +   
Sbjct: 260 CMLLSWFATWVAKRQRR 276



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 23/153 (15%)

Query: 5   ARKTVTRYFSRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSL 59
            RK           LYD      R  ++   I   +++  +F W V              
Sbjct: 6   TRKPSRATVPEATALYDIPGPVTRRRHLMYGIASTVVILALFGWIVY------------- 52

Query: 60  GIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119
               L +   F   Q   P+         +L G  NT        + +  +G ++  GRL
Sbjct: 53  ---LLFDTDQFT-AQKWTPFEYKG-IQELLLRGLGNTLKAFAYAAVLSLALGAVLAVGRL 107

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           S ++++ WI  + VE FR +P LV+IFF++ ++
Sbjct: 108 SEHRVLRWISTLLVEFFRAMPVLVMIFFIFVAL 140


>gi|304395379|ref|ZP_07377262.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304356673|gb|EFM21037.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 219

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               F +   L    L       + + +F  G +++L    L     +   +   ++   
Sbjct: 1   MMTTFTDWDILRNLLLAARWTLLLSLVAFAGGTLVTLPLLFLRLLQRKWLTR---VIRGY 57

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T L  G P L+ + L +           F           + +  +AL+ YT+AF+ +I 
Sbjct: 58  TALFQGTPLLMQLFLAF-----------FGVGLFGIDVAPWTAASLALTFYTSAFLVDIW 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
              + A+P+GQ EA+  LGLT  +    V+ PQA+R  I P     + ++K ++LA  +G
Sbjct: 107 YGSIRALPKGQWEASRCLGLTFGQTLWRVVAPQAIRIGIAPTVGFAVQVIKGTALASIIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           F +L   G  + N T Q  ++  +    Y  +   ++ +   L  K 
Sbjct: 167 FIELTKAGTILNNVTYQPFKVFGLVALGYFLMCYPLSRYSQYLEKKF 213


>gi|237730631|ref|ZP_04561112.1| glutamate/aspartate transport system permease GltK [Citrobacter sp.
           30_2]
 gi|226906170|gb|EEH92088.1| glutamate/aspartate transport system permease GltK [Citrobacter sp.
           30_2]
          Length = 224

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIIPSLPYLLDGLIITLKITVTAVVIGIVWGTILAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKGYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y   S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLLVSYLKKR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLIITLKITVTAVVIGIVWGTILAVMRLSSFAPIAWFAKGYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|254512274|ref|ZP_05124341.1| amino acid ABC transporter, permease protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221535985|gb|EEE38973.1| amino acid ABC transporter, permease protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 432

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 21/260 (8%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++V   ++K   +++P           +   +R L    L M         S  LGI L+
Sbjct: 190 IIVALVVWKIGGALIPEGASENAWLPAV--PSRDLGGFMLNMMLGVTCVSLSVPLGIALA 247

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L      R       K + +++I       L TL+ +A     +F  P           +
Sbjct: 248 L-----GRQSDMPLIKWICVIFIEFIRGVPLITLLFVASVMLSYFFPP----------GS 292

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F+ + I ++ ++AA+IAE++R GL A+PRGQ EAA +LGL + +A RL++LPQA++
Sbjct: 293 SVDLFLRVMIMITMFSAAYIAEVIRGGLAALPRGQYEAADSLGLDYPQAMRLIILPQALK 352

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG----TIINQTGQAIEIILIWMFIYLSL 377
             IP + +  + L K+++L   +   DLV +            G   E+      ++  +
Sbjct: 353 ISIPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTEWNGVYWELFGFAALLFFVV 412

Query: 378 SIMIALFMNRLNAKIALKEK 397
              I+ +   L  ++A   +
Sbjct: 413 CYSISQYSQWLERRLATDHR 432


>gi|78355230|ref|YP_386679.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217635|gb|ABB36984.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 225

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 98/229 (42%), Gaps = 14/229 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +L    F  ++        +  +  + V S +LG +  +    L R F     K +   Y
Sbjct: 1   MLVLDSFYTDQLFPALNRGLLMSFLLIVPSALLGQLTGIAVGTL-RVFGSAPVKKIMNAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            + F   G+P +V + + Y           F           + +        + A+ +E
Sbjct: 60  TAVF--RGVPLMVQLFVLY-----------FGLPNVGIYLEPYTAALAGFVLCSGAYNSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            VR  L+++ +GQ++AA ALG++  K    +++PQA R  +P   ++ + L+K SSLA  
Sbjct: 107 YVRGALLSIRQGQIKAAQALGMSKFKTIFWIVIPQAFRRALPGCGNEVIYLIKYSSLAYI 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   +L      +  +T +  E  ++    YL+L  +    +++L  ++
Sbjct: 167 ITCIELTGEARAVATKTFRFTEAFMVVGMYYLALVTVATWILDKLEQRL 215



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 32/76 (42%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                 A+  G + +F L     +   + G  VG  R+  +  V  I   Y  VFR +P 
Sbjct: 9   TDQLFPALNRGLLMSFLLIVPSALLGQLTGIAVGTLRVFGSAPVKKIMNAYTAVFRGVPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           +V +F LY  + +V  
Sbjct: 69  MVQLFVLYFGLPNVGI 84


>gi|68535732|ref|YP_250437.1| glutamate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|68263331|emb|CAI36819.1| glutamate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
          Length = 312

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 15/237 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G       +     T+       V +  +G +L +      R       + +  
Sbjct: 53  WSFFLEGSTWTTYIIPGLISTIGAAVVSIVLAMAIGALLGV-----GRLSPSAPVRWICG 107

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +  F    +P LVL+   Y + F    L   +++G       F ++   L+ Y  + I
Sbjct: 108 IIVEFF--RSIPVLVLMLFAYAV-FSLLQLVPSSWLG-------FSAVVFGLTMYNGSVI 157

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +RSG+ ++PRGQ EAAIALGL+HR++  L+LLPQA+ +++P + SQ +  LK+S+L 
Sbjct: 158 AETLRSGIQSLPRGQREAAIALGLSHRQSINLILLPQAVAAMLPAIISQMVIALKDSALG 217

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +GF ++V  G  +    G  I  +L+   I + +++++A    R+  ++     +
Sbjct: 218 YMIGFVEVVRSGRQLGEYYGAMIPALLLIAVIMIVINMILAKLAERIEIQLRSGRAR 274



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L+E+  FE  +    +   S++ T I+ G ++T   A   ++ A  IG L+G GRLS + 
Sbjct: 42  LNEKGQFESAKWSF-FLEGSTWTTYIIPGLISTIGAAVVSIVLAMAIGALLGVGRLSPSA 100

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            V WIC + VE FR+IP LV++ F Y     +  +P   +     +F
Sbjct: 101 PVRWICGIIVEFFRSIPVLVLMLFAYAVFSLLQLVPSSWLGFSAVVF 147


>gi|295130174|ref|YP_003580837.1| hypothetical protein HMPREF0675_3666 [Propionibacterium acnes
           SK137]
 gi|291376703|gb|ADE00558.1| conserved hypothetical protein [Propionibacterium acnes SK137]
          Length = 182

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 1/144 (0%)

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           QF  +    V     +  I L     A++AEI  SGL +V  GQ EAA ALG+      R
Sbjct: 7   QFASVETEKVVTALAAAIIGLGLNEGAYLAEITGSGLESVDVGQTEAAKALGMKPSLIVR 66

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQAIEIILIWM 371
             ++PQAMR IIPP  ++ + +LK +SL +A+ F  DL      I N T   I ++++  
Sbjct: 67  RAIIPQAMRVIIPPPGNETIGMLKTTSLVLALPFTLDLQYATSAIANCTYAPIPLLVVAA 126

Query: 372 FIYLSLSIMIALFMNRLNAKIALK 395
             YL ++ ++ +  + L       
Sbjct: 127 CWYLVMTSVLMIGQHFLEQYFGRG 150


>gi|323529954|ref|YP_004232106.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386956|gb|ADX59046.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 89/190 (46%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + + +LY+  F   G P L+ + L +   F  P++              +++
Sbjct: 42  RVSPVAWLRRIVVLYVEVF--QGTPLLMQLFLAF---FGLPLV--------GVDVSPWVA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQA++  + P  
Sbjct: 89  ATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFSQQLRYIVWPQALKIAVAPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++   +  +   L
Sbjct: 149 GFLVQVVKSTALASIIGFTELTKTGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVL 208

Query: 389 NAKIALKEKK 398
             +  + + +
Sbjct: 209 EKRNKVGQHR 218



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L+    T  L+    +   ++G L+ A R+S    +  I  +YVEVF+  P L
Sbjct: 7   WDIARNLLLAARWTVLLSLIAFVGGGVVGLLLLAMRVSPVAWLRRIVVLYVEVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  V       +     + L               A
Sbjct: 67  MQLFLAFFGLPLVGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111


>gi|261379484|ref|ZP_05984057.1| amino acid ABC transporter, permease protein [Neisseria subflava
           NJ9703]
 gi|319638914|ref|ZP_07993672.1| ABC transporter [Neisseria mucosa C102]
 gi|284797944|gb|EFC53291.1| amino acid ABC transporter, permease protein [Neisseria subflava
           NJ9703]
 gi|317399818|gb|EFV80481.1| ABC transporter [Neisseria mucosa C102]
          Length = 219

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    + +    LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWSYLIDAIPKFVDAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+G++AVP+GQ+EA  A+GL+  +  R V LPQA    +P + +  L L+K +S+  
Sbjct: 103 EAIRAGILAVPKGQIEAGKAIGLSRFQVFRYVELPQAWAVAVPAIGANVLFLMKETSIVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AVG A+L+ V   II    +  E + +    YL + + ++L       ++ 
Sbjct: 163 AVGIAELLFVTKDIIGMDYKTNEALFLLFASYLIILLPVSLLARWAENRVR 213



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|209516319|ref|ZP_03265176.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503255|gb|EEA03254.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F          L       + + +F  G V+ L    + R       + + +LY+  F  
Sbjct: 4   FTLWDIARNLLLAARWTVLLSLIAFGGGGVVGLMLLAM-RVSPIAWLRRIVVLYVEVF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P++              + +  + L+ YT+A++ +I R  +
Sbjct: 61  QGTPLLMQLFLAF---FGLPLI--------GIDVSPWAAATVTLTLYTSAYLVDIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ  A  +LG+T  +  R ++ PQA++  + P     + ++K+++LA  +GF +L
Sbjct: 110 EAVPRGQWAAGASLGMTFGQQLRYIVWPQALKIAVAPTVGFLVQVVKSTALASIIGFTEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  I N   +   I  +   IY ++   +  +   L  +  + + +
Sbjct: 170 TKTGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVLEKRQKVGQHR 218



 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 36/105 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L+    T  L+        ++G ++ A R+S    +  I  +YVEVF+  P L
Sbjct: 7   WDIARNLLLAARWTVLLSLIAFGGGGVVGLMLLAMRVSPIAWLRRIVVLYVEVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  +             + L               A
Sbjct: 67  MQLFLAFFGLPLIGIDVSPWAAATVTLTLYTSAYLVDIWRGCVEA 111


>gi|326388276|ref|ZP_08209879.1| octopine ABC transporter, permease protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207442|gb|EGD58256.1| octopine ABC transporter, permease protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 241

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S  +G VL       +R         L   Y    +      LV++ L +  
Sbjct: 29  LTLALSLASMTIGSVLGALL-AWARGSRRGWLARLATAY-GVIMRGVPELLVVLLLYFGA 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +     +      P F++  +A+   +AA+ AE+ R GL+AVP+GQ+EAA+A G
Sbjct: 87  PGLMAAVAGLFGLPAPGSPPAFLTGSLAIGLVSAAYQAEVFRGGLLAVPKGQVEAALAAG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R ++LPQ +  ++PPL + +   LK+S+L    G A+L+ V       T +  
Sbjct: 147 MGPWLRFRRIVLPQVLHHVLPPLGNVWQFNLKDSALVAITGLAELMRVSLVAAGSTRRPF 206

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
                 M +YL+L+ + +    R+ A+
Sbjct: 207 LFFAAAMVLYLALTSLSSAVFRRIEAR 233



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +   +++G V T  L+ + M   +++G L+   R S    +A +   Y  + R +P
Sbjct: 16  TDGWGRVLVLGAVLTLALSLASMTIGSVLGALLAWARGSRRGWLARLATAYGVIMRGVP 74


>gi|239941505|ref|ZP_04693442.1| putative amino acid ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239987969|ref|ZP_04708633.1| putative amino acid ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291444949|ref|ZP_06584339.1| ectoine/hydroxyectoine ABC transporter [Streptomyces roseosporus
           NRRL 15998]
 gi|291347896|gb|EFE74800.1| ectoine/hydroxyectoine ABC transporter [Streptomyces roseosporus
           NRRL 15998]
          Length = 243

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 13/231 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     L    L      +    +  V   +L  VL+ FA  L         +    + +
Sbjct: 1   MSDFFSLLVEELPRVRSGLWVTLQATVLGALLAGVLA-FALGLMAGSRLLLARGFSRVVV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G    V +   +  ++  P+L  +            +   +A      A+ AE+
Sbjct: 60  EFF--RGTSLYVQL---FWFYYAMPLLTGYE-------MEPLICGVVAFGLNFGAYGAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  + +VPRGQ EAAIAL L+  +    V+LPQA   +IP  T+  + LLK + L   +
Sbjct: 108 VRGAINSVPRGQYEAAIALNLSPTRRLWKVILPQAWVQMIPSFTNLLIQLLKATPLLWLL 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ADL++V   + ++TG+ +   L  + +Y  L+  + + MN L      +
Sbjct: 168 SAADLMTVVQQLRDRTGETVTAYLTLLAVYFVLAYALTMLMNLLERSAKRR 218



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T      G + A ++   +G    S   L     RV VE FR     V +F+ Y +
Sbjct: 18  GLWVTLQATVLGALLAGVLAFALGLMAGSRLLLARGFSRVVVEFFRGTSLYVQLFWFYYA 77

Query: 152 VL 153
           + 
Sbjct: 78  MP 79


>gi|226327561|ref|ZP_03803079.1| hypothetical protein PROPEN_01432 [Proteus penneri ATCC 35198]
 gi|225204087|gb|EEG86441.1| hypothetical protein PROPEN_01432 [Proteus penneri ATCC 35198]
          Length = 160

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 81/136 (59%), Gaps = 1/136 (0%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           PE  ++  AL+  T+++IA  V++G++A+ +GQ +A ++LG    +    ++LPQA+R +
Sbjct: 4   PEITTVICALALITSSYIAHGVKAGILAIGKGQWQAGLSLGFNRWQVLWHIVLPQALRMM 63

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIA 382
           +P   +Q++ L+K++SLA  VG  +L  +   + N++    +E+ L   FIY  L   + 
Sbjct: 64  VPSFINQWIALIKDTSLAYVVGVGELSFLATQVNNRSMVYPMEVFLFVAFIYFVLCFSLE 123

Query: 383 LFMNRLNAKIALKEKK 398
           +  NR+    + +++K
Sbjct: 124 IIANRVAKLFSTQKEK 139


>gi|116873173|ref|YP_849954.1| amino acid ABC transporter, permease protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|116742051|emb|CAK21175.1| amino acid ABC transporter, permease protein [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 213

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG ++++           K      +L I  +++ G P L
Sbjct: 12  LDGAKTTLLVFAVTLVCSIPLGAIVAVGNIS-------KIAPLKFILNIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     +++IA     AA+ AEI R G +++  G
Sbjct: 65  LQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 114 QYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 174 AMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKRFS 210



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFAVTLVCSIPLGAIVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 95


>gi|163733774|ref|ZP_02141216.1| amino acid ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
 gi|161392885|gb|EDQ17212.1| amino acid ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
          Length = 432

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 19/258 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++  ++  +L  L IP+++        + +R L    L M         S  LGIVL+L 
Sbjct: 190 IVAAVFVWILGGLLIPENANETAMMTAVPSRDLGGFMLNMMLGVTCVSLSVPLGIVLAL- 248

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       K + +++I       L TL+ +A     +F  P           +  
Sbjct: 249 ----GRQSSMPLIKWICVIFIEFIRGVPLITLLFVASVMLAYFFPPE----------STV 294

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F+ + I ++ +++A+IAE++R GL A+P+GQ E A +LGL + +ATRL++LPQA++  
Sbjct: 295 DLFLRVVIMITMFSSAYIAEVIRGGLAALPKGQYEGADSLGLDYTQATRLIILPQALKIS 354

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-IINQT---GQAIEIILIWMFIYLSLSI 379
           IP + +  + L K+++L   +   DLV +    I+  T   G   E+      ++  +  
Sbjct: 355 IPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTDWGGVYWELYGFAALLFFVVCY 414

Query: 380 MIALFMNRLNAKIALKEK 397
            I+ +   L  ++A   +
Sbjct: 415 GISQYSQWLERRLATDHR 432


>gi|15888896|ref|NP_354577.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156666|gb|AAK87362.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 385

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 16/263 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P      L    L ++       +L  G+F   +  +     +     +  F   + +  
Sbjct: 134 PKAPFKRLNALALFIILPFIAFFLLIGGVFGLPKVETQLWGGLMVTLILSFFGITVSLPF 193

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +    L R  +    K L +L+I       L T VL      L    P    F+     
Sbjct: 194 GILL-ALGRRSNLPVIKMLCVLFIEVIRGIPLIT-VLFFASIMLPLFLPDGWTFD----- 246

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               +F+   + +S +++A++AE++R GL A+P+GQ E A +LGL + + TRL++LPQA+
Sbjct: 247 ----KFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQKTRLIVLPQAL 302

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYL 375
           + +IP + + ++ L K++SL   +G  DL+ +          A  +      +   F++ 
Sbjct: 303 KLVIPGIVNTFIGLFKDTSLVSIIGMFDLLGIVTLNQADANWATPVTAMTGYIFAGFVFW 362

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
                ++ +   +   +    K+
Sbjct: 363 IFCFGMSRYSLFMERHLDTGHKR 385



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +   G L+  GR S   ++  +C +++EV R IP + V+FF 
Sbjct: 172 LWGGLMVTLILSFFGITVSLPFGILLALGRRSNLPVIKMLCVLFIEVIRGIPLITVLFFA 231

Query: 149 YKSVLSVLPIPDHSIVL 165
              +   LP        
Sbjct: 232 SIMLPLFLPDGWTFDKF 248


>gi|313667601|ref|YP_004047885.1| ABC transporter [Neisseria lactamica ST-640]
 gi|313005063|emb|CBN86495.1| putative ABC transporter [Neisseria lactamica 020-06]
          Length = 219

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  L L+K +S+  
Sbjct: 103 EAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +I 
Sbjct: 163 AVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIR 213



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|270263715|ref|ZP_06191984.1| transporter [Serratia odorifera 4Rx13]
 gi|270042599|gb|EFA15694.1| transporter [Serratia odorifera 4Rx13]
          Length = 224

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 10/219 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+       VF  + G +L++      R    K       LY++ F     
Sbjct: 14  PYLLQGLVITLKITVTAIVFGILWGTILAVM-----RLSPIKPISWFATLYVNLFRSVP- 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV++ L + L    P L Q             +S  +A S + AA+ +EI+R+G+I++
Sbjct: 68  --LVMVLLWFYL--VVPSLLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGIISI 123

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   +  AD    
Sbjct: 124 SRGQSSAALALGMTHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRT 183

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             TI  + G  +E+IL   F+Y  +S+  +  ++ L  +
Sbjct: 184 ASTIGERDGTQVEMILFAGFVYFVISLAASALVSYLKKR 222



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 39/68 (57%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS  K ++W   +YV +FR++P ++V+ +
Sbjct: 15  YLLQGLVITLKITVTAIVFGILWGTILAVMRLSPIKPISWFATLYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVLSV 155
            Y  V S+
Sbjct: 75  FYLVVPSL 82


>gi|170694566|ref|ZP_02885718.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140448|gb|EDT08624.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 237

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 89/228 (39%), Gaps = 4/228 (1%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +L                 +     + V S  +G  L++    ++R   ++       LY
Sbjct: 4   ILNDFWRAFLYWDGQRMSGLAVTLWLLVVSVGIGFCLAIPL-AVARVSKKRWLSTPVRLY 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T++  G P  V + L Y   +    +     +  +     F    +A +  T A+  E
Sbjct: 63  --TYVFRGTPLYVQLLLIYTGMYSLEFVRSHQLLD-AFFRSGFHCAILAFALNTCAYTTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    + +   G++EAA A G++     R +++P A+R  +P  +++ + +L  +++A  
Sbjct: 120 IFAGAIRSTSHGEVEAARAYGMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               D++ V     + T ++ +   +   IYL +S  +     R    
Sbjct: 180 ATVPDILKVARDANSATYRSFDAFGLAALIYLVVSFALVALFRRAERH 227



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL    +     +   +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVVSVGIGFCLAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHS 162
             + S+  +  H 
Sbjct: 80  TGMYSLEFVRSHQ 92


>gi|209549650|ref|YP_002281567.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209535406|gb|ACI55341.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 268

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 17/211 (8%)

Query: 192 FSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
               +G +++L         RL+   +    + LP L     + +G+  L+   L +  +
Sbjct: 66  IGLAIGFLVALGQQSEEKSLRLAAGIYTTIFRGLPELLTLFIIYYGMQMLIQSLLTFVGY 125

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              PV               F++  IALS   +A+ +E++ S   A+P+GQ EA  +LGL
Sbjct: 126 DGPPVEIN-----------AFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGDSLGL 174

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            H +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD++      +  T +   
Sbjct: 175 HHGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTKEPFF 234

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   +YL L+I+ +  +  +       E
Sbjct: 235 FYGLACCLYLVLAILSSFLLVYVERWAKRSE 265



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 7/169 (4%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q  +    D+ +   I +G   T  +A   +     IG LV  G+ S  K +     +
Sbjct: 32  LGQSTILACGDTGWGDEIALGLQVTVSVAIVTLPIGLAIGFLVALGQQSEEKSLRLAAGI 91

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR +P L+ +F +Y  +  ++        L   +  +   +          A   V
Sbjct: 92  YTTIFRGLPELLTLFIIYYGMQMLI------QSLLTFVGYDGPPVEINAFLAGVIALSVV 145

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           FS     VL L A R       + G +L L +  T  +  LP LV IAL
Sbjct: 146 FSAYCSEVL-LSAFRAIPKGQYEAGDSLGLHHGRTLRLIILPQLVRIAL 193


>gi|91778290|ref|YP_553498.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|296160736|ref|ZP_06843550.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|91690950|gb|ABE34148.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
 gi|295889039|gb|EFG68843.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 216

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I +   ++G  +++     +R    +  +     Y+  F                +  
Sbjct: 22  IGISLTGLLIGFFVAIGVCA-ARLSPNRAARMFGGAYVFFFR------------GVPMLV 68

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++       G  VSP  ++    +S  +A++IAEI+R G +++P G +EAA  LGL+
Sbjct: 69  QLLLVYYLLPFAGINVSP-VVAAISTVSLCSASYIAEILRGGFLSIPPGHLEAARMLGLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +L+PQA R  +P L ++ + L+K SSL   VG A+L      I   T + +E 
Sbjct: 128 PFDMLRRILVPQAFRLTLPSLVNEMVLLIKASSLISVVGVAELTRTAQNIAASTYRPLEA 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            L    IY  +   + L  +    ++
Sbjct: 188 YLAAGLIYFVICGALTLVAHAAEYRL 213


>gi|220913575|ref|YP_002488884.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219860453|gb|ACL40795.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 263

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 19/263 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L V   ++   ++ L +      +   +F   +             K  +    LG V+ 
Sbjct: 13  LYVQAGIFVVAIAALILATDWKTMATNVFNFGKIGPMFPDIFLVGLKNTLIYTFLGFVVG 72

Query: 202 LFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           L    L    +       + +   YI  F       LV IA  Y +     V      I 
Sbjct: 73  LSGGLLLALMKLSSFPLYRWIATGYIEFFRGIPA-LLVFIAFGYGVPLAFGVQWNVTII- 130

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                     + I+L    +A+IAE +R+GL AVP+GQ+EAA +LG+   +A   +++PQ
Sbjct: 131 ----------VMISLGIVASAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVTIVIPQ 180

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIY 374
           A + ++PPLT++ + L K+SSL   +G      +L   G   I+  G  +  +L+    Y
Sbjct: 181 AFKIVLPPLTNEVILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFY 240

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L ++I ++L   +  ++ A  ++
Sbjct: 241 LVVTIPLSLLARKFESRSARTKR 263



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 33/79 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            LVG  NT    F G +     G L+   +LS+  L  WI   Y+E FR IP L+V    
Sbjct: 54  FLVGLKNTLIYTFLGFVVGLSGGLLLALMKLSSFPLYRWIATGYIEFFRGIPALLVFIAF 113

Query: 149 YKSVLSVLPIPDHSIVLPF 167
              V     +  +  ++  
Sbjct: 114 GYGVPLAFGVQWNVTIIVM 132


>gi|209547515|ref|YP_002279433.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538759|gb|ACI58693.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M + +  L+          ++ V    L +V++  A  L R       +AL   YI  F 
Sbjct: 1   MSVWSGYLTLILEGALVTLQLTVMGSALALVMAFLAG-LGRLSRFFAVRALATAYIEFF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   Y           F             +  +AL     A+ AE+VR  
Sbjct: 59  -RGTSIFVQLFWVY-----------FVLPFAGLTLTPLQAGVLALGLNVGAYAAEVVRGA 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV R Q EA +AL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D
Sbjct: 107 VKAVGREQSEACVALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +      +  QTG  +      + +Y  +++ I+  M  L  ++A  
Sbjct: 167 MTFQAQVVRAQTGSTLVPFATILILYFLMALAISAAMRWLERRMARS 213



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 3/142 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL G + T  L   G   A ++  L G GRLS    V  +   Y+E FR     V 
Sbjct: 7   YLTLILEGALVTLQLTVMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F++Y  +                + LN    +   +     A     S      ++L  
Sbjct: 67  LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEAC---VALNL 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
           +R  R  H    +ALPL+  + 
Sbjct: 124 SRYQRMRHVILPQALPLMLPTF 145


>gi|33592312|ref|NP_879956.1| amino acids ABC transporter, permease protein [Bordetella pertussis
           Tohama I]
 gi|33596425|ref|NP_884068.1| amino acids ABC transporter, permease protein [Bordetella
           parapertussis 12822]
 gi|33602284|ref|NP_889844.1| amino acids ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
 gi|33566194|emb|CAE37100.1| amino acids ABC transporter, permease protein [Bordetella
           parapertussis]
 gi|33571957|emb|CAE41478.1| amino acids ABC transporter, permease protein [Bordetella pertussis
           Tohama I]
 gi|33576723|emb|CAE33801.1| amino acids ABC transporter, permease protein [Bordetella
           bronchiseptica RB50]
          Length = 229

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/192 (24%), Positives = 96/192 (50%), Gaps = 13/192 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            ++R    +  +    L ++T          L+ L +  +F  P L   +  G       
Sbjct: 47  AIARVSPFRGLRVASRLLVNTVRGMP-----LLMLIFWAYFAVPKLTGGSISG------- 94

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F +L  AL  Y +A+++E++RSG+ A+P+GQ+EA+ +LG+ +    R V+LPQA+ +++P
Sbjct: 95  FWTLVTALVIYESAYLSEVIRSGIEAIPKGQIEASRSLGVGYWTTMRKVVLPQALFNVLP 154

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALF 384
            +TSQ+++ +K +SL   +   +L      + N    Q +++  I   IY  +   ++  
Sbjct: 155 SMTSQFVSTIKETSLGYVISVNELTFAANQVNNLVLTQPLQVFGILAIIYFLVCFSLSRS 214

Query: 385 MNRLNAKIALKE 396
           +  L++ +    
Sbjct: 215 VAWLDSWVRRSR 226


>gi|312961372|ref|ZP_07775877.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311285030|gb|EFQ63606.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 220

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 18/237 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + +    L       +   +    ++  +A   VF  ++GI   L        +     +
Sbjct: 1   MYESPSWLHELWIARDTLWAGFQTSIYCSALAIVFGTLIGIFAGLVL-----TYGTFWMR 55

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A   LY+       +  LVL                +           F +  + L+ + 
Sbjct: 56  APFRLYVDLIRGTPVFVLVL-------------ACFYMLPALGWQITAFQAGAVGLTLFC 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            + ++EIVR  L A+PRGQ+EA  A+GLT  ++   VLLPQA+R I+P   +    ++K 
Sbjct: 103 GSHVSEIVRGALQAIPRGQLEAGKAIGLTFPQSLAYVLLPQALRQILPTWVNSSTEIVKA 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S+L   +G A+L+     +I +T   +E  L   F++  ++  I LF   +  ++AL
Sbjct: 163 STLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFMFFVINYAIELFGRYIEKRVAL 219


>gi|307702006|ref|ZP_07639014.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus mitis NCTC 12261]
 gi|307616651|gb|EFN95840.1| ABC transporter membrane-spanning permease - aspartate/glutamate
           transport [Streptococcus mitis NCTC 12261]
          Length = 266

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 9/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R +    +T+       +F  VL ++ ++      +  +       PL       + G 
Sbjct: 35  PRIVQQLPITIMLTIGGALFGLVLALLFAIVKINRVKILY-------PLQAFFVSFLKGT 87

Query: 233 PTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P LV + L Y       K +  Q+         P      +A +   AA+ +E +R+ ++
Sbjct: 88  PILVQLMLTYYGIPLALKALNQQWGTGFNINAIPAAAFAIVAFAFNEAAYASETIRAAIL 147

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + G  ++ 
Sbjct: 148 SVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSAGVVEVF 207

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 208 AQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|288935411|ref|YP_003439470.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288890120|gb|ADC58438.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 11/205 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              + S V     +L    L         +   L+     L  G P L+ + L +     
Sbjct: 19  WTVLLSLVAFTGGALVTLPLLLLRLTGGRQVKRLIRGYIELFQGTPLLMQLFLAF----- 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 F           + +  +AL+ YT+AF+ +I    + A+P+GQ EA+  LGL+ 
Sbjct: 74  ------FGVALFGIDVSAWTAASVALTLYTSAFLLDIWFGSIRALPKGQWEASRCLGLSF 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    V+ PQA+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++ 
Sbjct: 128 GQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVELTKAGTMLTNVTYQPFKVF 187

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
            +    Y  L   ++ +   L  K 
Sbjct: 188 ALVALGYFILCYPLSRYSRYLENKF 212


>gi|222083300|ref|YP_002542703.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221738680|gb|ACM39518.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 235

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 113/239 (47%), Gaps = 18/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            + +             L     T+  +     F F +G++L+L           +T   
Sbjct: 5   IEQNWKFFLIGQYPYGPLGGIAGTIWLSILSVCFCFPVGLLLAL----------SQTSSI 54

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L  +S+ +   + ++ L+ L + ++F  P L  +   G       F ++ + L+ +  
Sbjct: 55  GWLKQVSSTISSLIRSIPLVMLIFWVYFLLPKLTGYAITG-------FTTMLVTLTLFQG 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A++ EI+++G++++PRGQ+EAA ++GL++ +A   V+LPQ + ++ P + SQ +  +K++
Sbjct: 108 AYMGEILKAGIMSLPRGQIEAARSIGLSYSQAQTDVILPQVLYNMAPSIISQLVATIKDT 167

Query: 339 SLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SL   +G  +L+  G  + +    + +++  I    Y  +   ++ F   L  +I  + 
Sbjct: 168 SLGYIIGVQELMYAGSQVNSSVMVKPLQVFAITSAGYFIICFSLSSFTRYLEHRITNRR 226


>gi|152970316|ref|YP_001335425.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238894800|ref|YP_002919534.1| putative amino acid ABC transport system permease component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|150955165|gb|ABR77195.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238547116|dbj|BAH63467.1| putative amino acid ABC transport system permease component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 218

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                        +       + S V     +L    L         +   L+     L 
Sbjct: 1   MTTFTDWDIIRNLLLAGRWTVLLSLVAFTGGALVTLPLLLLRLTGGRQVKRLIRGYIELF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ YT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGVDVSAWTAASVALTLYTSAFLLDIWFGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+  LGL+  +    V+ PQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 RALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 170 TKAGTMLTNVTYQPFKVFALVALGYFILCYPLSRYSRYLENKF 212


>gi|157155672|ref|YP_001461823.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E24377A]
 gi|157077702|gb|ABV17410.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Escherichia coli E24377A]
          Length = 224

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ   A+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSVALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|319761414|ref|YP_004125351.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317115975|gb|ADU98463.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 250

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 10/225 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   +   L +          + + +  + +V+      L           L   ++  
Sbjct: 22  FGKGGDITYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDSPWVVRLGNAWVEF 81

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV I L Y                     P F+ +  AL  +T+A IAE VR
Sbjct: 82  F--RNIPLLVHIFLWY--------HVIPAIFPAMKSLPGFVLVVFALGFFTSARIAEQVR 131

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ A+PRGQ  A +A+G T  +  R VLLP A R IIPPLTS+ +N+ KNSS+A AV  
Sbjct: 132 SGIQALPRGQRYAGMAMGFTTVQYYRYVLLPMAFRIIIPPLTSETMNIFKNSSVAFAVSV 191

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L      +  +T + IE+ L+   +Y+  ++ I   M  +  +
Sbjct: 192 SELTMYAMQVQEETSRGIEVYLLVTALYVVSALAINRIMAFIEKR 236



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEVFRNIPPL 142
           +Y   +L  +  T  ++   +  A ++G+L+G  R    +  V  +   +VE FRNIP L
Sbjct: 29  TYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDSPWVVRLGNAWVEFFRNIPLL 88

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           V IF  Y  + ++ P           +F
Sbjct: 89  VHIFLWYHVIPAIFPAMKSLPGFVLVVF 116


>gi|300722325|ref|YP_003711610.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628827|emb|CBJ89405.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Xenorhabdus nematophila ATCC 19061]
          Length = 224

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        +      +    KI   + ++GI+       + R    K       LY
Sbjct: 1   MYQFDWSSIIPSMPLLLNGLVITLKITGIAVIVGIIWGTVL-AMMRLSSIKVVSWFATLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--IVPNLLQNVLGISPQTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V RGQ  A++ALG+TH ++ RLV+LPQA R++ P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSVSRGQSSASLALGMTHMQSMRLVILPQAFRAMTPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD       I  + G  +E+IL    +Y   S   ++ +N L  +
Sbjct: 175 LSLADFFRTATNIGERDGTQVEMILFAGAVYFVFSFAASMLVNYLKKR 222



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 40/67 (59%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    +I   I GT++   RLS+ K+V+W   +YV +FR++P ++V+ + 
Sbjct: 16  LLNGLVITLKITGIAVIVGIIWGTVLAMMRLSSIKVVSWFATLYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSV 155
           Y  V ++
Sbjct: 76  YLIVPNL 82


>gi|227329656|ref|ZP_03833680.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 247

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLS------LFATRLSRHFHEKTGKALPLLYISTF 227
                  +T+  +    V S VLG +L+      +   R     +    +  PLL    F
Sbjct: 20  WLWHGFLITLGLSLSTIVLSTVLGFLLAAARDGQIHVLRGVVVAYSSLFRNTPLLVQLFF 79

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG   L    +   L  + P       +  +  S EF++    L+ Y++AFIAE +R+
Sbjct: 80  WYFGAGQLFPSEMMQWL--NTPHTLSLFGMTLAWPSFEFLAGLAGLTLYSSAFIAEEIRA 137

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V RGQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSL +A+G A
Sbjct: 138 GIRGVARGQKYAAHALGLTGFQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGVA 197

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +  +   +   +Y+ +  ++  +      +
Sbjct: 198 ELSYASRQVETETLRTFQAFGVATVLYIVIIAVMEGWGMWRQQR 241



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 40/90 (44%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +  +     Y   +  GF+ T  L+ S ++ +T++G L+ A R     ++  +   Y 
Sbjct: 6   QSLESWLLAPQYLIWLWHGFLITLGLSLSTIVLSTVLGFLLAAARDGQIHVLRGVVVAYS 65

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            +FRN P LV +FF Y     + P      
Sbjct: 66  SLFRNTPLLVQLFFWYFGAGQLFPSEMMQW 95


>gi|152982686|ref|YP_001351971.1| ABC-type glutamate/aspartate transport system permease protein
           [Janthinobacterium sp. Marseille]
 gi|151282763|gb|ABR91173.1| ABC-type glutamate/aspartate transport system permease protein
           [Janthinobacterium sp. Marseille]
          Length = 228

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 105/222 (47%), Gaps = 7/222 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
             +    +    ++ V +   G++       ++R    KT   +   Y++      + ++
Sbjct: 13  WPYLLAGLQYTLQLTVVAAFGGVIFGTLL-AMARLSSNKTLSLIAAAYVNL-----MRSI 66

Query: 236 VLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            L+ + +  +F  P++ Q               S YI    + AA+  EI+R+G+ ++ +
Sbjct: 67  PLLLVIFWFYFLMPIVLQTITGSERPVQLGADRSAYITFIMFEAAYFCEIMRAGIQSISK 126

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+ A  ALGLT+R++ +LV+LPQA R+++P L +Q + L ++ SL   +   D V    
Sbjct: 127 GQVNAGYALGLTYRQSMQLVVLPQAFRNMLPILLTQTIVLFQDVSLVSLLNVTDFVGAAV 186

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  +  + +E+ L    +Y  LS  ++  + +L  + A+  
Sbjct: 187 KVAQRDSRVVEMYLFVAIVYFVLSFALSTLVKQLQKRFAIIR 228



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 34/68 (50%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L         I GTL+   RLS+NK ++ I   YV + R+IP L+VI
Sbjct: 13  WPYLLAGLQYTLQLTVVAAFGGVIFGTLLAMARLSSNKTLSLIAAAYVNLMRSIPLLLVI 72

Query: 146 FFLYKSVL 153
           F+ Y  + 
Sbjct: 73  FWFYFLMP 80


>gi|307131835|ref|YP_003883851.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Dickeya dadantii 3937]
 gi|306529364|gb|ADM99294.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Dickeya dadantii 3937]
          Length = 229

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 5/220 (2%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ + S VL +++ L     ++    +        Y  T LI G+P LVL+ 
Sbjct: 10  MDGTRMTLQLALCSLVLALLIGLVGAA-AKLSSNRLLSGCFSGY--TTLIRGVPDLVLML 66

Query: 240 LKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           L +  L      L +   +    + P   +  I L     A+  E  R   +AVPRGQ+E
Sbjct: 67  LIFYGLQMVLNSLTETLGLDQIDIDP-LAAGIITLGFIYGAYFTETFRGAYLAVPRGQIE 125

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA+A G T  K  R ++ P  MR  +P + + +  +LK+++L   +G +D++        
Sbjct: 126 AAVAFGFTPMKVFRRIMFPSMMRFALPGIGNNWQVILKSTALVSLLGLSDVIKTTQLAGK 185

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            T       ++   +YL  + +    +  L  + +   +K
Sbjct: 186 GTHHPFFFAIVAGVLYLIFTTLSNGVLWWLEKRYSQGVRK 225



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I+ G   T  LA   ++ A +IG +  A +LS+N+L++     Y  + R +P LV+
Sbjct: 5   YSELIMDGTRMTLQLALCSLVLALLIGLVGAAAKLSSNRLLSGCFSGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|241762911|ref|ZP_04760974.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241368086|gb|EER62291.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 273

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 11/222 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +  N +I V +  LG  + L    LS        + +   Y+  F     
Sbjct: 56  WNWLPALLRGLGVNIQISVLAVALGTAVGLVVGALS-LSPVHAVRVVVRSYVQVF--RNA 112

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI     +        + + +  +   P+++ + + L+  T+A +AEI R  + ++
Sbjct: 113 PILVLIYFTTYVF-----PFEVHLVSWTFPFPDWVKVVLGLALPTSANVAEIFRGAIQSI 167

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q EAA +L     +  RLV+LPQ +R ++PP  + Y ++  ++SLA  VG  D+V  
Sbjct: 168 PSAQWEAAQSLAFRRSQIFRLVVLPQCVRRMLPPWMNLYASITMSTSLASLVGVHDVVDT 227

Query: 353 GGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                N   +T   I +    + ++ +    IA     L  +
Sbjct: 228 AQIASNTVARTDFTILVYFTLLALFFAYCYPIARATRALEKR 269



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 42/97 (43%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
                 +T   ++  A+L G      ++   +   T +G +VGA  LS    V  + R Y
Sbjct: 46  GTTPRAFTYLWNWLPALLRGLGVNIQISVLAVALGTAVGLVVGALSLSPVHAVRVVVRSY 105

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V+VFRN P LV+I+F        + +   +   P  +
Sbjct: 106 VQVFRNAPILVLIYFTTYVFPFEVHLVSWTFPFPDWV 142


>gi|157146736|ref|YP_001454055.1| hypothetical protein CKO_02510 [Citrobacter koseri ATCC BAA-895]
 gi|157083941|gb|ABV13619.1| hypothetical protein CKO_02510 [Citrobacter koseri ATCC BAA-895]
          Length = 224

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSMPYLLAGLVITLKITVTAVVIGILWGTILAVM------RLSSFAPVAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P L Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGLLQDVLGISPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTATTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVVIGILWGTILAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|329927203|ref|ZP_08281501.1| putative arginine ABC transporter, permease protein ArtQ
           [Paenibacillus sp. HGF5]
 gi|328938603|gb|EGG34986.1| putative arginine ABC transporter, permease protein ArtQ
           [Paenibacillus sp. HGF5]
          Length = 219

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 14/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + + + +    L     T+       + S  LG V +L      +          PL 
Sbjct: 1   MSMDYIVQIGKPMLEGAQTTILLFLISILASIPLGFVFTLMVRSAIK----------PLA 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +++   I+      L+       F  PVL     IG   V   F++  +A     AA+ A
Sbjct: 51  WLANAYIYVFRGTPLLLQLLFFCFGLPVL---PVIGEYLVLDRFVAACLAFVLNYAAYFA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL+A+ +GQ EA+  LGL   + T  V+LPQ  R  +P ++++ + L+K+++L  
Sbjct: 108 EIFRGGLLAIDKGQYEASKVLGLNRWQTTTKVILPQMFRVALPAVSNESITLVKDTALLY 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AV   +L+    T +N+    I   +I   IYL +++++ L    L  +  
Sbjct: 168 AVAVPELLHFAYTAVNRDF-TIMPFVIAGVIYLLMTLVLTLLFKFLERRFK 217


>gi|307319175|ref|ZP_07598605.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306895282|gb|EFN26038.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 222

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 14/227 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F             +      ++   + ++G+V+S+F     +       +A+   Y
Sbjct: 1   MYEFNFAPVLASFDQLLVGAWLTVRLSCAAMLIGLVVSVF-CAWGKTAGPAILRAVIDGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   +I   P LV I   +   F  P L       G  +SP   +  +AL     A+  E
Sbjct: 60  IE--IIRNTPFLVQIFFIF---FGMPSL-------GLRLSPN-SAALLALVVNFGAYGTE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ +GQ+EA  ALGL+  +  R V++  A+R++ P LTSQ++ L+ N+S+   
Sbjct: 107 IIRAGIESIHKGQVEAGWALGLSRPQIFRYVVMKPALRTVYPALTSQFIYLMLNTSVVSV 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +   DL + G  + + T  + E+ +    IYL+LS+  +     +  
Sbjct: 167 ISADDLAAAGNDLQSATFASFEVYIAVTLIYLALSVGFSALFYAVEK 213



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  L+ + M+   ++      G+ +   ++  +   Y+E+ RN P LV IFF+
Sbjct: 16  LLVGAWLTVRLSCAAMLIGLVVSVFCAWGKTAGPAILRAVIDGYIEIIRNTPFLVQIFFI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + S+      +      + +N 
Sbjct: 76  FFGMPSLGLRLSPNSAALLALVVNF 100


>gi|194398452|ref|YP_002038094.1| amino acid ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194358119|gb|ACF56567.1| amino acid ABC transporter, permease protein, putative
           [Streptococcus pneumoniae G54]
          Length = 266

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 5/231 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +     G+      + T   + +   + G+VL+L    + +    K    L   ++S 
Sbjct: 25  FSLRSVFDGIPRIVQQLPTTIMLTIGGALFGLVLALL-FAIVKINRVKILYPLQAFFVSF 83

Query: 227 FLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEI 284
             + G P LV + L  Y +      L Q    G      P      +A +   AA+ +E 
Sbjct: 84  --LKGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAAFAIVAFAFNEAAYASET 141

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + 
Sbjct: 142 IRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSA 201

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  ++ +          +  E       +Y  ++I I      +  K+A+ 
Sbjct: 202 GVVEVFAQAQIXGGADYRYFERFXSVALVYWVVNIGIESLGRFIERKMAIS 252


>gi|15802855|ref|NP_288882.1| histidine transport system permease protein [Escherichia coli
           O157:H7 EDL933]
 gi|15832446|ref|NP_311219.1| histidine transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|168748160|ref|ZP_02773182.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4113]
 gi|168755063|ref|ZP_02780070.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4401]
 gi|168761251|ref|ZP_02786258.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767937|ref|ZP_02792944.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4486]
 gi|168772963|ref|ZP_02797970.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4196]
 gi|168780166|ref|ZP_02805173.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4076]
 gi|168787218|ref|ZP_02812225.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC869]
 gi|168798481|ref|ZP_02823488.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC508]
 gi|195935687|ref|ZP_03081069.1| histidine transport system permease protein [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809152|ref|ZP_03251489.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208813542|ref|ZP_03254871.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820591|ref|ZP_03260911.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398746|ref|YP_002271717.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4115]
 gi|217327256|ref|ZP_03443339.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. TW14588]
 gi|254794201|ref|YP_003079038.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|261223237|ref|ZP_05937518.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259213|ref|ZP_05951746.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|12516664|gb|AAG57437.1|AE005462_12 histidine transport system permease protein [Escherichia coli
           O157:H7 str. EDL933]
 gi|13362662|dbj|BAB36615.1| histidine transport system permease protein [Escherichia coli
           O157:H7 str. Sakai]
 gi|187771032|gb|EDU34876.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4196]
 gi|188017229|gb|EDU55351.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4113]
 gi|189002113|gb|EDU71099.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4076]
 gi|189357714|gb|EDU76133.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4401]
 gi|189362954|gb|EDU81373.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4486]
 gi|189368266|gb|EDU86682.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4501]
 gi|189372848|gb|EDU91264.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC869]
 gi|189378936|gb|EDU97352.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC508]
 gi|208728953|gb|EDZ78554.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4206]
 gi|208734819|gb|EDZ83506.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4045]
 gi|208740714|gb|EDZ88396.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160146|gb|ACI37579.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC4115]
 gi|209764888|gb|ACI80756.1| histidine transport system permease protein [Escherichia coli]
 gi|209764890|gb|ACI80757.1| histidine transport system permease protein [Escherichia coli]
 gi|209764892|gb|ACI80758.1| histidine transport system permease protein [Escherichia coli]
 gi|209764896|gb|ACI80760.1| histidine transport system permease protein [Escherichia coli]
 gi|217319623|gb|EEC28048.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. TW14588]
 gi|254593601|gb|ACT72962.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Escherichia coli O157:H7
           str. TW14359]
 gi|320192068|gb|EFW66713.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. EC1212]
 gi|320641136|gb|EFX10615.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O157:H7 str. G5101]
 gi|320646524|gb|EFX15443.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O157:H- str. 493-89]
 gi|320651621|gb|EFX20001.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O157:H- str. H 2687]
 gi|320667893|gb|EFX34801.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326339661|gb|EGD63472.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. 1125]
 gi|326344123|gb|EGD67884.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           O157:H7 str. 1044]
          Length = 228

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAARAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|84517033|ref|ZP_01004390.1| polar amino acid uptake family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84509151|gb|EAQ05611.1| polar amino acid uptake family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 210

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 3/210 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I + +F LG+++   A  L +       +   LL + T ++  +P L+LI + Y    
Sbjct: 1   MQISLGAFALGLLIGT-AGALGKLHGGPVTRD--LLAVYTVVVRAVPELILILILYYAGT 57

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D                   ++    L     A+  E++R  + +VPRGQ EAA A G+ 
Sbjct: 58  DLLNQALRALGQRPVEISGVVAGIAVLGIVQGAYATEVLRGAIQSVPRGQHEAARAYGMG 117

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V +P  +   +P L++ +L   K+++L   VGF++L          T      
Sbjct: 118 PVQIFRRVTIPAMLPLALPGLSNLWLIATKDTALLAIVGFSELTLETRQAAGSTRAYFTF 177

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            L    +YL ++++       + A+    +
Sbjct: 178 FLAAGALYLLMTLLSGRIFGWIEARYRRGQ 207


>gi|46190371|ref|ZP_00121566.2| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189438886|ref|YP_001953967.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|189427321|gb|ACD97469.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
          Length = 366

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 114/274 (41%), Gaps = 21/274 (7%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
            ++V WI  +   +F  +  L+++              +            +  L    +
Sbjct: 21  IRIVNWIAGI---LFAVVLVLILMRLHNPPDGENQLSWELWKPAVEREAWTDFYLPGLWM 77

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           T+       V + V G+V  +      R       + +  + +       +  L++   +
Sbjct: 78  TIKATIVAVVGAVVFGLVFGV-----GRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFWR 132

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +      P             SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++
Sbjct: 133 WFAFAGLP-------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASL 179

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALGLT  ++   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +   
Sbjct: 180 ALGLTETQSLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYF 239

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++ +++   IY     +++     L +++  +
Sbjct: 240 NILQTLVMAAVIYFIACWLLSRLAEWLPSRMQQR 273



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  +  V V
Sbjct: 56  ELWKPAVEREAWTDFYLPGLWMTIKATIVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|332160867|ref|YP_004297444.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318604770|emb|CBY26268.1| glutamate Aspartate transport system permease protein GltJ
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325665097|gb|ADZ41741.1| putative glutamate/aspartate transport system permease [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 246

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSSI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GACYVELFRNVPLIVQFFTWYLVVPELLPADLGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRIV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP
Sbjct: 53  LRTVPNRILSSIGACYVELFRNVPLIVQFFTWYLVVPELLP 93


>gi|259501520|ref|ZP_05744422.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
 gi|302191507|ref|ZP_07267761.1| ABC-type amino acid transport system, permease component
           [Lactobacillus iners AB-1]
 gi|309806871|ref|ZP_07700858.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 03V1-b]
 gi|309809565|ref|ZP_07703423.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners SPIN 2503V10-D]
 gi|259167038|gb|EEW51533.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus iners DSM 13335]
 gi|308166737|gb|EFO68929.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 03V1-b]
 gi|308170237|gb|EFO72272.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners SPIN 2503V10-D]
          Length = 212

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + +   + T+  +     FS ++G++ +L      R  H      +  +Y+  F   
Sbjct: 8   HWPQFMQGLSSTIMCSLIAIFFSLIIGVICALVEVSPCRIPHL-----IARIYVEIFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  +V+I      +   P +              F +  IAL+ YT+AFI+E V+SG+ 
Sbjct: 63  PLLIIVMIF-----YLVVPQM--------GLKLTGFGAGTIALTLYTSAFISETVKSGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQME A + G+++ +A R V+LPQA++ +IPPL +Q+++L+KNSS+   V   DL+
Sbjct: 110 SIGIGQMEGARSNGMSYVQAMRYVVLPQALKVVIPPLGNQFISLIKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   + + +   ++   +YL L++ ++ +M  L  K+A
Sbjct: 170 YQADVISLASFETVNTYIVVGLLYLVLTLPLSYYMRYLEEKLA 212



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++    + G  +T   +   +  + IIG +     +S  ++   I R+YVE+FRNIP L+
Sbjct: 7   NHWPQFMQGLSSTIMCSLIAIFFSLIIGVICALVEVSPCRIPHLIARIYVEIFRNIPLLI 66

Query: 144 VIFFLYKSVLSV 155
           ++   Y  V  +
Sbjct: 67  IVMIFYLVVPQM 78


>gi|126699384|ref|YP_001088281.1| amino acid ABC transporter permease [Clostridium difficile 630]
 gi|254975412|ref|ZP_05271884.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-66c26]
 gi|255092799|ref|ZP_05322277.1| amino acid ABC transporter, permease protein [Clostridium difficile
           CIP 107932]
 gi|255100912|ref|ZP_05329889.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-63q42]
 gi|255306802|ref|ZP_05350973.1| amino acid ABC transporter, permease protein [Clostridium difficile
           ATCC 43255]
 gi|255314541|ref|ZP_05356124.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-76w55]
 gi|255517216|ref|ZP_05384892.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-97b34]
 gi|255650322|ref|ZP_05397224.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-37x79]
 gi|260683435|ref|YP_003214720.1| amino acid ABC transporter permease [Clostridium difficile CD196]
 gi|260687031|ref|YP_003218164.1| amino acid ABC transporter permease [Clostridium difficile R20291]
 gi|115250821|emb|CAJ68645.1| ABC-type transport system, aminoacid-family permease [Clostridium
           difficile]
 gi|260209598|emb|CBA63248.1| amino acid ABC transporter, permease protein [Clostridium difficile
           CD196]
 gi|260213047|emb|CBE04401.1| amino acid ABC transporter, permease protein [Clostridium difficile
           R20291]
          Length = 203

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 15/210 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F  + ++ I L +    L R    K    +   YI   ++ G P L+ + + +   +
Sbjct: 9   IAMFCITLIVSIPLGIGVAFL-RLSKNKLVSGITQCYI--LIMRGTPLLLQMIVIF---Y 62

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L          V   F +  +A     AA+ AEI R G+ ++ RGQ EA+  LG  
Sbjct: 63  GLPLL--------GIVFDRFTAGVVAFFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFD 114

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                + V+ PQ  + I+ P++++ + L+K++SL   +G  D++ +    +N+    + +
Sbjct: 115 KFTMYKRVIFPQVFKRILAPISNEVITLVKDTSLVYILGLNDILRISQIAMNREASLLPL 174

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 IYL    ++      L  K +   
Sbjct: 175 F-EAGAIYLIFVAILTKGFELLEKKYSYYR 203



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 38/100 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G      +    +I +  +G  V   RLS NKLV+ I + Y+ + R  P L+ +  +
Sbjct: 1   MLQGLEIVIAMFCITLIVSIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVI 60

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  + D         FLN              + 
Sbjct: 61  FYGLPLLGIVFDRFTAGVVAFFLNYAAYFAEIFRGGIQSI 100


>gi|257866711|ref|ZP_05646364.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872772|ref|ZP_05652425.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257800669|gb|EEV29697.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806936|gb|EEV35758.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
          Length = 214

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  + + +  + +S   +T+   A   + S  LGI+L+       R           ++ 
Sbjct: 1   MFEYLVNVMPQLISGTGITVKLFALTLIGSIPLGILLAFVLASRLRILKL-------IVQ 53

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +L+ G P L+ +   +   +  P+L          V   F +  IA     AA+  E
Sbjct: 54  VYVWLMRGTPLLLQLIFVF---YGLPIL--------GIVFDRFEAALIAFIINYAAYFTE 102

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+ ++P GQ EAA  L L+  +  + +++PQ ++  +P + ++ +NL+K++SL   
Sbjct: 103 IFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVKDTSLVYI 162

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G +D++ +G   + +    +  ++    IYL ++ +  L + ++  K+    
Sbjct: 163 LGLSDVMRIGKIAMERD-STLLPLVGVGLIYLVMTGVFTLLLKQIETKLDYYR 214



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L    +I +  +G L+     S  +++  I +VYV + R  P L+ + F+
Sbjct: 12  LISGTGITVKLFALTLIGSIPLGILLAFVLASRLRILKLIVQVYVWLMRGTPLLLQLIFV 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  + D          +N              + 
Sbjct: 72  FYGLPILGIVFDRFEAALIAFIINYAAYFTEIFRGGIQSI 111


>gi|302540685|ref|ZP_07293027.1| amino acid ABC transporter, permease [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302458303|gb|EFL21396.1| amino acid ABC transporter, permease [Streptomyces himastatinicus
           ATCC 53653]
          Length = 256

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 13/185 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       +AL  +Y   F    +P L +I L Y           F           F +
Sbjct: 48  RLSRVWPLRALAAVYTELF--KNIPLLAIIFLTY-----------FGLGSVDIRLDVFTA 94

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             ++L  + +A+++EI R+ +  +  GQ EA  ALGL        V+ PQA+R  +P   
Sbjct: 95  GCLSLIVFYSAYLSEIFRAAISGIHDGQTEAGEALGLGRLSVFGHVIFPQALRLALPGTN 154

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  ++LLK +SL V +  A+L+S    I + T +A+E+ L+   +Y +L   ++  +  +
Sbjct: 155 TMLVDLLKGTSLLVTISAAELMSEARLITSSTFRALEVYLVISAVYFALCYPLSQLLLAV 214

Query: 389 NAKIA 393
              I 
Sbjct: 215 ERAIR 219



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 35/76 (46%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y + +L   + T          A ++G +V   RLS    +  +  VY E+F+NIP L
Sbjct: 13  SDYRSDLLDALLKTVSYTAVSFAGAALLGLVVALLRLSRVWPLRALAAVYTELFKNIPLL 72

Query: 143 VVIFFLYKSVLSVLPI 158
            +IF  Y  + SV   
Sbjct: 73  AIIFLTYFGLGSVDIR 88


>gi|255655794|ref|ZP_05401203.1| amino acid ABC transporter, permease protein [Clostridium difficile
           QCD-23m63]
 gi|296450968|ref|ZP_06892715.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296879066|ref|ZP_06903062.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
 gi|296260186|gb|EFH07034.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP08]
 gi|296429939|gb|EFH15790.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Clostridium difficile NAP07]
          Length = 203

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 15/210 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F  + ++ I L +    L R    K    +   YI   ++ G P L+ + + +   +
Sbjct: 9   IAMFCITLIISIPLGIGVAFL-RLSKNKLVSGITQCYI--LIMRGTPLLLQMIVIF---Y 62

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L          V   F +  +A     AA+ AEI R G+ ++ RGQ EA+  LG  
Sbjct: 63  GLPLL--------GIVFDRFTAGVVAFFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFD 114

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                + ++ PQ  + I+ P++++ + L+K++SL   +G  D++ +    +N+    + +
Sbjct: 115 KFTMYKRIIFPQVFKRILAPISNEVITLVKDTSLVYILGLNDILRISQIAMNREASLLPL 174

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 IYL    ++      L  K +   
Sbjct: 175 F-EAGAIYLIFVAILTKGFELLEKKYSYYR 203



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 38/100 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G      +    +I +  +G  V   RLS NKLV+ I + Y+ + R  P L+ +  +
Sbjct: 1   MLQGLEIVIAMFCITLIISIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVI 60

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  + D         FLN              + 
Sbjct: 61  FYGLPLLGIVFDRFTAGVVAFFLNYAAYFAEIFRGGIQSI 100


>gi|163793473|ref|ZP_02187448.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
 gi|159181275|gb|EDP65790.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [alpha proteobacterium BAL199]
          Length = 220

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 18/224 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     TM+ +A + V   + G++  L        +  K  + L  LY+   ++ G+
Sbjct: 14  WSLLQGFITTMEISAIVIVIGLIAGMIGGLLL-----VYGPKPVRLLMRLYVD--VLRGI 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI   Y                       + +  +AL+ + +A ++E  R  + ++
Sbjct: 67  PVLVLILFSYY-----------GLALLGVNISAYTAGVVALAGFCSAHMSETFRGAIDSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA A+GLT ++    VLLPQA R I+PP  +  + ++K ++L   +G  D++  
Sbjct: 116 PVGQTEAAKAIGLTFQQRFIYVLLPQAARRIVPPAINTAVEMVKGTTLLSIIGVLDVLLA 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               I +    IE     M  Y  L+  ++        +     
Sbjct: 176 TQQTIARNYMVIEFYATAMLFYFVLNFTLSRMGAYFERRFGFIR 219



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 35/66 (53%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            ++L GF+ T  ++   ++   I G + G   +   K V  + R+YV+V R IP LV+I 
Sbjct: 14  WSLLQGFITTMEISAIVIVIGLIAGMIGGLLLVYGPKPVRLLMRLYVDVLRGIPVLVLIL 73

Query: 147 FLYKSV 152
           F Y  +
Sbjct: 74  FSYYGL 79


>gi|325062837|gb|ADY66527.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 260

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 11/224 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L +       N  I + +  +G ++ +    +      +  +A  L Y+  F     P 
Sbjct: 45  WLPYLGKGFAMNVLISILAIAIGTIIGVVLG-IMELAPYRLVRAPALTYVQIF--RNAPH 101

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVLI     +        +    G     P+++   + L+   +A IAEI R  + ++P 
Sbjct: 102 LVLIFAATYIF-----PFEIVAFGNYIPFPDWIKAVVGLAIPASAHIAEITRGAIQSIPT 156

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-- 352
            Q EAA  LG +  +  R ++LPQ ++  +PP  + Y ++   ++LA  VG  +L+    
Sbjct: 157 AQWEAAQGLGFSRNQTLRWIILPQCVKRSLPPWMNLYASITMGTALASLVGVHELLHAAT 216

Query: 353 -GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              T + +    + + L  +  +      ++ F  RL  + A +
Sbjct: 217 DASTAVQRNDFTVVVYLTVLMAFFLFCYPVSRFTQRLERRFASR 260



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  GF     ++   +   TIIG ++G   L+  +LV      YV++FRN P LV+
Sbjct: 45  WLPYLGKGFAMNVLISILAIAIGTIIGVVLGIMELAPYRLVRAPALTYVQIFRNAPHLVL 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           IF         +    + I  P  +
Sbjct: 105 IFAATYIFPFEIVAFGNYIPFPDWI 129


>gi|322374410|ref|ZP_08048924.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|321279910|gb|EFX56949.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 229

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            + +   +    L+  ++T+   A + +FS  LGIV++       +  H        L+ 
Sbjct: 16  SMSYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFALQVRWKPLHY-------LID 68

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +++ G P L+ +   Y +                       +  IA     AA+ AE
Sbjct: 69  LYIWVMRGTPLLLQLIFIYYV-----------LPSIGIRLDRLPAAVIAFVLNYAAYFAE 117

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+  +P+GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A
Sbjct: 118 IFRGGIETIPKGQYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYA 177

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G +DL+    T  N+    + + L    IYL +  ++ +   +L  K +   
Sbjct: 178 LGISDLILASRTAANRDASLVPMFL-AGAIYLIMIGLVTIVAKKLEKKYSYYR 229



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 4/108 (3%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           + I   I+      SY   IL   +N    T  +    +I +  +G +V        K +
Sbjct: 4   YAIIGTIIFRRCSMSYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFALQVRWKPL 63

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            ++  +Y+ V R  P L+ + F+Y  + S+    D          LN 
Sbjct: 64  HYLIDLYIWVMRGTPLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNY 111


>gi|315635241|ref|ZP_07890518.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315475987|gb|EFU66742.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 219

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R +    +T+       + S V+G++ ++        +  K+   L   
Sbjct: 1   MNWDYILSATPRFVHAMLMTLHLAFWGILLSLVIGVICAVIT-----TYKVKSLTWLVKG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y           F           F    I L+    +++A
Sbjct: 56  YIE--LSRNTPLLIQVFFLY-----------FGLSKIGLKLDGFTCGIIGLAFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R GL AV +GQ+E+A+++GLT  +A R V+ PQA     P + +  L L+K +S+  
Sbjct: 103 EAIRGGLEAVSKGQIESALSIGLTPFQAFRYVIFPQAFAIATPAIGANCLFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           AV  A+L+ V   +I    +  E + + +  YL + + ++LF++ L  +   
Sbjct: 163 AVAVAELMFVAKEVIGLDYKTNEALFLLVVFYLIILLPMSLFISYLERRTRR 214



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  LAF G++ + +IG +         K + W+ + Y+E+ RN P L+ +FFL
Sbjct: 13  FVHAMLMTLHLAFWGILLSLVIGVICAVITTYKVKSLTWLVKGYIELSRNTPLLIQVFFL 72

Query: 149 YKSV 152
           Y  +
Sbjct: 73  YFGL 76


>gi|239833273|ref|ZP_04681601.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821336|gb|EEQ92905.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 241

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 91/229 (39%), Gaps = 2/229 (0%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F  +               +    F  G V  + A   S    ++  + +   Y ST L 
Sbjct: 13  FAEDGWGYDMLRATGMTLAVAFCGFAAGAVFGIVAAAAS-FSSQRILRIVADGY-STVLR 70

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                LV+    +        +G      G   +P F++  +A+   + A+ AE+ R  +
Sbjct: 71  GIPDLLVIYLFYFGSSAVLSQIGALFGGHGFVSAPIFITGALAIGVVSGAYQAEVYRGAV 130

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+P+G++EAA A G+      R +++PQA R  IP + + +  +LK S+L   VG  +L
Sbjct: 131 LALPKGEIEAAKAYGMPTHLLFRRIMVPQAARFAIPGIGNVWQLVLKESALISVVGLVEL 190

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +         T +     L    +YL ++ +  L       +     ++
Sbjct: 191 MRQAQIGAGSTRKPFTFFLTAGLLYLVITFVSGLLFKTAEKRAMRGIRR 239



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           ++  +   +L     T  +AF G     + G +  A   S+ +++  +   Y  V R IP
Sbjct: 14  AEDGWGYDMLRATGMTLAVAFCGFAAGAVFGIVAAAASFSSQRILRIVADGYSTVLRGIP 73

Query: 141 PLVVIFFLYKSVLSV 155
            L+VI+  Y    +V
Sbjct: 74  DLLVIYLFYFGSSAV 88


>gi|238920805|ref|YP_002934320.1| glutamate-aspartate transport system permease [Edwardsiella
           ictaluri 93-146]
 gi|238870374|gb|ACR70085.1| glutamate-aspartate transport system permease [Edwardsiella
           ictaluri 93-146]
          Length = 225

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V+GI+       + R    K    L  LY
Sbjct: 1   MYAFDWSSIVPSLPYLLDGLVITLKITLTAVVVGILWGTLL-AVMRLSRWKPLAWLAALY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A + + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSLLQRFLGLSPQSDIRLISAMVAFALFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V RGQ  AA+ALG+T  ++  LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIKSVARGQNAAALALGMTPWQSMYLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L +  L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQLEMILFAGAVYFIISLSASLLVGHLKKR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 40/68 (58%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GTL+   RLS  K +AW+  +YV +FR++P ++V+ +
Sbjct: 15  YLLDGLVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVLSV 155
            Y  V S+
Sbjct: 75  FYLVVPSL 82


>gi|209547537|ref|YP_002279455.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538781|gb|ACI58715.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I + + + G VL +F   L+  +     +     Y    +I G P LVL+   Y +
Sbjct: 22  MTVSISLLAILAGSVLGVFVG-LALVYGNVVLRVAVRAYTD--IIRGTPVLVLVLASYYV 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G  + P F +  +AL+ + ++ + EIVR  L A+P+GQ EAA A+G
Sbjct: 79  SAAV----------GLDLGP-FSAGVLALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    VL PQAMR  +P   +    ++K S+L   +G A+L+     II++   ++
Sbjct: 128 LTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   +   +Y  ++  I  F   +  K AL
Sbjct: 188 QFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 31/68 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I+ G   T  ++   ++  +++G  VG   +  N ++    R Y ++ R  P LV++  
Sbjct: 15  VIINGIGMTVSISLLAILAGSVLGVFVGLALVYGNVVLRVAVRAYTDIIRGTPVLVLVLA 74

Query: 148 LYKSVLSV 155
            Y    +V
Sbjct: 75  SYYVSAAV 82


>gi|34495573|ref|NP_899788.1| glutamate/aspartate transport system permease [Chromobacterium
           violaceum ATCC 12472]
 gi|34101428|gb|AAQ57797.1| glutamate/aspartate transport system permease protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 222

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 6/192 (3%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L+R    K    +   YI  F      ++ L+ +    +   P+L  +   G    
Sbjct: 37  ILLALARLSSNKVLSGMATAYIYYFR-----SIPLLLVISWFYLAVPMLLNW-ITGNLEP 90

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F S  +A   + AA+ AEIVR+G+ A+P+GQ  AA ALG+ + +   LV+LPQA+R 
Sbjct: 91  VGAFTSCLVAFVMFEAAYFAEIVRAGIQAIPKGQAGAAYALGMRYHQVMGLVVLPQALRK 150

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P L  Q + L +++SL  AVG  D ++   +  +  G   E ++    +Y  +S   +
Sbjct: 151 MLPLLLQQSIILFQDTSLVYAVGLMDFLNTARSKGDIVGLPHEFLIFAGMVYFLISFGAS 210

Query: 383 LFMNRLNAKIAL 394
             + RL  ++A+
Sbjct: 211 RLVKRLQQRLAV 222



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 40/93 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +   G+    ++G L+   RLS+NK+++ +   Y+  FR+IP L+VI + Y +
Sbjct: 17  GMLLTLKMLAGGVAGGVLLGILLALARLSSNKVLSGMATAYIYYFRSIPLLLVISWFYLA 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
           V  +L     ++                     
Sbjct: 77  VPMLLNWITGNLEPVGAFTSCLVAFVMFEAAYF 109


>gi|167914635|ref|ZP_02501726.1| histidine transport system permease protein [Burkholderia
           pseudomallei 112]
 gi|217418800|ref|ZP_03450307.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 576]
 gi|217398104|gb|EEC38119.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 576]
          Length = 237

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 90/225 (40%), Gaps = 4/225 (1%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYIST 226
           G +  N   S           +++    LG+   L     ++R    +T      LY  T
Sbjct: 6   GQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRTVSGAVWLY--T 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++  G P  V + L Y   +   V+    ++  S          +A +    A+  EI  
Sbjct: 64  YVFRGTPLYVQLLLCYTGIYSLSVVHDHAWL-DSFFRSAMNCTLLAFTLNECAYATEIFA 122

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA     
Sbjct: 123 GAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTATV 182

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 183 PDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEAR 227



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 67/218 (30%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    L G   T WL    +     +   +   R S N+ V+    +
Sbjct: 5   IGQYWQNYLFSDGYR---LSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRTVSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  +         L+L A        
Sbjct: 122 AGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA + Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIW 219


>gi|161502502|ref|YP_001569614.1| hypothetical protein SARI_00546 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863849|gb|ABX20472.1| hypothetical protein SARI_00546 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 228

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGLVG-AGAKLSQNRVTGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +   +           ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNVVTDSLGIEQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTRWQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +    +LS N++   I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|16079799|ref|NP_390623.1| glutamine ABC transporter permease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310682|ref|ZP_03592529.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221315005|ref|ZP_03596810.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221319926|ref|ZP_03601220.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221324207|ref|ZP_03605501.1| glutamine ABC transporter (integral membrane protein) [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|81815728|sp|O34606|GLNP_BACSU RecName: Full=Probable glutamine ABC transporter permease protein
           glnP
 gi|2635191|emb|CAB14687.1| glutamine ABC transporter (permease) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|28375455|emb|CAA93320.1| integral membrane protein [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291485152|dbj|BAI86227.1| glutamine ABC transporter, integral membrane protein [Bacillus
           subtilis subsp. natto BEST195]
          Length = 218

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 17/230 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F    +   L+F          +   S +L     L A  L R+        L  + +
Sbjct: 1   MDFIGAYSQEHLAFLWDGFLVTLYVAFISIILSFFFGLIAGTL-RYAKVPVLSQLIAVLV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T        L L+ + +   F  P +G    I          +   AL+ + +A ++EI
Sbjct: 60  ETIRN-----LPLLLIIFFTFFALPEIGIKLEIT--------AAAITALTIFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSGL ++ +GQ+EAA + GL++ +    +++PQA+R ++PP+ SQ+++LLK++SLAV +
Sbjct: 107 IRSGLKSIDKGQIEAARSSGLSYTQTLFFIVMPQALRRMVPPIVSQFISLLKDTSLAVVI 166

Query: 345 GFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L+     I  Q+        I L+   +Y +++  ++L   RL  +
Sbjct: 167 ALPELIHNAQIINGQSADGSYFFPIFLLAALMYFAVNYSLSLAARRLEVR 216



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 39/77 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +  GF+ T ++AF  +I +   G + G  R +   +++ +  V VE  RN+P 
Sbjct: 8   SQEHLAFLWDGFLVTLYVAFISIILSFFFGLIAGTLRYAKVPVLSQLIAVLVETIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPI 158
           L++IFF + ++  +   
Sbjct: 68  LLIIFFTFFALPEIGIK 84


>gi|325970768|ref|YP_004246959.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta sp. Buddy]
 gi|324026006|gb|ADY12765.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 211

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 85/187 (45%), Gaps = 13/187 (6%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R         +  +YI   ++ G P ++ +   Y   +         +I G++    
Sbjct: 34  AKGRMSKNPIISNMVNIYIM--IMRGTPLILQLLFVYFAPY---------YIFGAS-YDR 81

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F ++ +      AA+ AEI R G+ ++P GQ EA++ LG +       V+ PQ ++ IIP
Sbjct: 82  FTAVIVGFVINYAAYFAEIYRGGIQSIPIGQYEASLVLGFSKTHTFTHVVAPQVVKRIIP 141

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + ++ + L+K+++LA  +G A+L  V      +    + I  I    Y  ++ +++   
Sbjct: 142 AMGNEVITLVKDTALAQTIGVAELFRVAQNASARQFSTMPIF-IAGVFYFLMNALVSRSF 200

Query: 386 NRLNAKI 392
           + L  K+
Sbjct: 201 DLLEKKL 207


>gi|262370796|ref|ZP_06064120.1| amino acid ABC transporter permease [Acinetobacter johnsonii SH046]
 gi|262314158|gb|EEY95201.1| amino acid ABC transporter permease [Acinetobacter johnsonii SH046]
          Length = 237

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 88/220 (40%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                 F    +   A + V S  +G VL++    ++R       +    ++  T++  G
Sbjct: 12  YLWTDGFQMTGVAMTAWLLVLSIAIGFVLAVPL-SIARVSEHAFVRGP--VWFFTYIFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  V + + Y   +    +     +             +A +  TAA+  EI    + +
Sbjct: 69  TPLYVQLLIIYTGIYSLEFVHAHERLD-EFFREGLNCTILAFALNTAAYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPYGEIEAAKAFGMSPWKRYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T    +   I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYATFDAFGIAAVLYACLAFILIWIFRKLEQR 227


>gi|156934834|ref|YP_001438750.1| hypothetical protein ESA_02682 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533088|gb|ABU77914.1| hypothetical protein ESA_02682 [Cronobacter sakazakii ATCC BAA-894]
          Length = 246

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQDAPFGNTTYLGWLWSGFQVTVALSISAWIIAFLVGSLFGILRTVPNRFLSGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTCYVELFRNVPLIVQFFTWYLVVPELLPENLGMWFKAELDPNVQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLVMNLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 7/155 (4%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +  GF  T  L+ S  I A ++G+L G  R   N+ ++ I   YVE+FRN+P +V
Sbjct: 20  TYLGWLWSGFQVTVALSISAWIIAFLVGSLFGILRTVPNRFLSGIGTCYVELFRNVPLIV 79

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
             F  Y  V  +LP       L               L+      +F  + V   V +  
Sbjct: 80  QFFTWYLVVPELLPE-----NLGMWFKAELDPNVQFFLSSMICLGLFTAARVCEQVRAAI 134

Query: 204 --ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
               R  ++     G  LP  Y    L      +V
Sbjct: 135 QSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIV 169


>gi|55820917|ref|YP_139359.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55822837|ref|YP_141278.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55736902|gb|AAV60544.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55738822|gb|AAV62463.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 213

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T+     + + S  LGIVL+            K    L  LY+
Sbjct: 1   MSYVLEVLPALLNGAVVTLQVFFIVIILSIPLGIVLAFLMQ-----IKFKPLNWLLTLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                 V     +  +A +   AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYYV-----------LPSVGIVFDRLPAAILAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGILAIPKGQYEAAKMLKLSPFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+    T  N+    +  + +   IYL L  ++ +    +  K 
Sbjct: 163 GVGDLLLESRTAANRDA-TLAPMFVAGAIYLILVGVVTVASKNIEKKF 209



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 39/101 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T  + F  +I +  +G ++        K + W+  +YV + R  P L+ + F
Sbjct: 10  ALLNGAVVTLQVFFIVIILSIPLGIVLAFLMQIKFKPLNWLLTLYVWIMRGTPLLLQLIF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  + SV  + D          LN              A 
Sbjct: 70  VYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAI 110


>gi|300715836|ref|YP_003740639.1| Glutamate/aspartate transport system permease [Erwinia billingiae
           Eb661]
 gi|299061672|emb|CAX58788.1| Glutamate/aspartate transport system permease [Erwinia billingiae
           Eb661]
          Length = 225

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI V + + GIV       + R    K       LY
Sbjct: 1   MYEFDWSTIVPNLPYLMNGMVITLKITVTAIIFGIVWGTLL-AVMRLSSFKPVSWFARLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSFLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIVSIARGQGSAALALGMTRWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI    G  IE++L    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTADTIGINNGTEIEMVLFAGAVYFVISLSASLLVSYLKKK 222



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 40/68 (58%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G V T  +  + +I   + GTL+   RLS+ K V+W  R+YV +FR++P ++V+ +
Sbjct: 15  YLMNGMVITLKITVTAIIFGIVWGTLLAVMRLSSFKPVSWFARLYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVLSV 155
            Y  V S 
Sbjct: 75  FYLVVPSF 82


>gi|224418072|ref|ZP_03656078.1| amino acid ABC transporter ATP-binding protein [Helicobacter
           canadensis MIT 98-5491]
 gi|253827401|ref|ZP_04870286.1| ABC-type amino acid transport system, permease component
           [Helicobacter canadensis MIT 98-5491]
 gi|253510807|gb|EES89466.1| ABC-type amino acid transport system, permease component
           [Helicobacter canadensis MIT 98-5491]
          Length = 238

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 5/228 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F               +  +  I +  F+LG +L L    L R +       L  LYIS 
Sbjct: 4   FDFEYALSAFPTLLKGVPISLAIAIVGFILGAILGLIL-SLIRIYRVPILFQLATLYISF 62

Query: 227 FLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F   G+P LV I L Y       +    Q+      +       +Y+  + Y +A+++EI
Sbjct: 63  F--RGIPVLVQIFLAYYGIPLVLRYFNHQYGLNIDISGIDAIYFMYLVYALYCSAYLSEI 120

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RS ++++ +GQ+EAA ++G+   +A  +++LPQ+M   +P + + ++ L+K +SL  A 
Sbjct: 121 FRSSILSIDKGQLEAAYSVGMNTTQALFIIILPQSMLLALPNILNFFIILIKETSLVFAA 180

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +++ +     +++ + +E+ +I   IY  +SI +      L  K+
Sbjct: 181 SVPEIMGIATLEADRSSKFLEVYIIAALIYWVISIFLEKSFAILETKL 228



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 39/91 (42%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +  +    S    +L G   +  +A  G I   I+G ++   R+    ++  +  +Y+  
Sbjct: 3   LFDFEYALSAFPTLLKGVPISLAIAIVGFILGAILGLILSLIRIYRVPILFQLATLYISF 62

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           FR IP LV IF  Y  +  VL   +H   L 
Sbjct: 63  FRGIPVLVQIFLAYYGIPLVLRYFNHQYGLN 93


>gi|152978297|ref|YP_001343926.1| arginine transporter permease subunit ArtM [Actinobacillus
           succinogenes 130Z]
 gi|150840020|gb|ABR73991.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 228

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 100/225 (44%), Gaps = 6/225 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     + T+  + V + V+   ++L  T L    + K  ++   ++I+ F   G 
Sbjct: 3   YDYFKIIAQGIPTSLILTVVALVVAFFMALLCTFLL-SMNNKIAQSAVKMFITLFT--GT 59

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV   L Y            N    S +S  +    +AL+  +AA+  ++    + A+
Sbjct: 60  PLLVQFFLIYAGP--GQFQWIVNSPLWSLLSNAWFCAMLALALNSAAYSTQLFHGAVKAI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K +SLA  +   D++  
Sbjct: 118 PKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTSLASTITILDIMGY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +      A+ I  I   IYL ++ +  L + +L  ++   E+
Sbjct: 177 ARQLYGTEYDALTIYGIAGVIYLVITGIATLLLRKLEKRVLAFER 221


>gi|309810990|ref|ZP_07704788.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308434954|gb|EFP58788.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 304

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 104/231 (45%), Gaps = 17/231 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                      +  L     T+       V + V GIV +     ++R  H +  + +  
Sbjct: 51  WKPFLEASTWQDYILPGLLGTLKAAGTAMVGAAVFGIVFA-----MARMSHVRPLRWVAG 105

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +       +P L+++   Y           +    G   +  F++  +AL  Y  A +
Sbjct: 106 VIVELG--RAVPVLLMMLFVY----------GWLSTRGDNDNNPFIATVVALIIYNGAVV 153

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++RSG+  +P GQ EA +++GLT  +  R +LLPQA+ +++P L SQ + +LK+++L 
Sbjct: 154 AEVIRSGVDQLPNGQREAGLSVGLTQTQTLRSILLPQAITAMMPTLISQLVVVLKDTALG 213

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             V + +++         +   + +I +   IY++L+  I+     +  ++
Sbjct: 214 YNVLYGEMLYKAKNAAVSSANIVPMIFVVALIYIALNYTISKIAILVEKRL 264



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 40/77 (51%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             P+   S++   IL G + T   A + M+ A + G +    R+S  + + W+  V VE+
Sbjct: 51  WKPFLEASTWQDYILPGLLGTLKAAGTAMVGAAVFGIVFAMARMSHVRPLRWVAGVIVEL 110

Query: 136 FRNIPPLVVIFFLYKSV 152
            R +P L+++ F+Y  +
Sbjct: 111 GRAVPVLLMMLFVYGWL 127


>gi|290473277|ref|YP_003466143.1| putative glutamate/aspartate ABC transporter membrane protein
           [Xenorhabdus bovienii SS-2004]
 gi|289172576|emb|CBJ79345.1| putative glutamate/aspartate transport protein (ABC superfamily,
           membrane) [Xenorhabdus bovienii SS-2004]
          Length = 245

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L +          + V + +   +L    T  +R    K  + L   Y + F     
Sbjct: 13  PEYLRWLWQGFLITLWLSVCTIISSTLLGFMITA-ARDSQIKPLRWLVTAYTTVF--RNT 69

Query: 233 PTLVLIALKYQ-----------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           P LV +   Y            +  +         +  +  S EF++ +I L+ Y+A F+
Sbjct: 70  PLLVQLFFWYFASGQILPQAAMIWLNTSHEIPIAGLTLAWPSFEFLAGFIGLTLYSAPFV 129

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +R+G+  + RGQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KNSSL 
Sbjct: 130 AEELRAGIQGIGRGQKYAAHALGLTDWQAMRYVVLPQALKIAMPPLLGQYMNIVKNSSLT 189

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +A+G A+L      +  Q+ Q  E   +   +Y+++  ++  +      +I ++
Sbjct: 190 MAIGVAELSYASRQVETQSLQTFEAFGVATVLYIAVIAIMEGWGQWRQQRILVR 243



 Score = 68.8 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 45/92 (48%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
            +Q I  +     Y   +  GF+ T WL+   +I +T++G ++ A R S  K + W+   
Sbjct: 2   FEQFITEHLLAPEYLRWLWQGFLITLWLSVCTIISSTLLGFMITAARDSQIKPLRWLVTA 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           Y  VFRN P LV +FF Y +   +LP      
Sbjct: 62  YTTVFRNTPLLVQLFFWYFASGQILPQAAMIW 93


>gi|317047305|ref|YP_004114953.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948922|gb|ADU68397.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 225

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI + + V GI+       + R       +    LY
Sbjct: 1   MYDFDWSSIPPSLPYLLNGMVITLKITLTAVVFGIIWGTLL-AVMRLSAFAPIRWFAKLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+I++ RGQ  AA+ALG+TH ++ +LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIISIARGQSSAALALGMTHWQSMQLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGLVYFVISLSASLLVSYLKRK 222



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 41/78 (52%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       +L G V T  +  + ++   I GTL+   RLSA   + W  ++YV +FR
Sbjct: 5   DWSSIPPSLPYLLNGMVITLKITLTAVVFGIIWGTLLAVMRLSAFAPIRWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S 
Sbjct: 65  SVPLVMVLLWFYLVVPSF 82


>gi|229918160|ref|YP_002886806.1| polar amino acid ABC transporter inner membrane subunit
           [Exiguobacterium sp. AT1b]
 gi|229469589|gb|ACQ71361.1| polar amino acid ABC transporter, inner membrane subunit
           [Exiguobacterium sp. AT1b]
          Length = 216

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 80/158 (50%)

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           I+          +L  +  + G        +L   L  + AA+I+E  R+ + +V +GQ+
Sbjct: 59  ISFFRGTPLLLQLLILYVGLTGFVQLSGMQALIFGLGFHFAAYISEAFRAAINSVDKGQV 118

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EA++ALG+   K  + ++ PQA+   IPP+++  ++++K++SL   +   +L  V   I 
Sbjct: 119 EASVALGIPKMKRFKDIIFPQALSRAIPPVSNSVIDIIKSTSLGSVIAVQELTYVSDQIA 178

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             T   + ++L    IY  LS +I    ++L  + A++
Sbjct: 179 ATTYLVMPLLLFSASIYWILSTLIQAGQHKLEQRYAIR 216


>gi|94987161|ref|YP_595094.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731410|emb|CAJ54773.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 228

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 105/231 (45%), Gaps = 14/231 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +L    F+    +      +  +  + + S ++G +L +    + R F ++  +   L  
Sbjct: 1   MLLDITFITQTVVPTLNKGLLVSIALIIPSAIIGFLLGVCIG-IIRVFGKRWLQR--LGN 57

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I T +  G+P  V + + Y           F     +     +++  I  +  T A+ +E
Sbjct: 58  IFTLIFRGVPLTVQLMILY-----------FGLPNINIYFEPYIAAVIGFTLCTGAYQSE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R  L+++ +GQ++AA ALG T  KA   +++PQA R  +P   ++ + L+K SSLA  
Sbjct: 107 YIRGALLSIKKGQLQAAYALGFTRLKAILFIIIPQATRYALPGCGNELVYLIKYSSLAYL 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   +L      +++QT + +EI  I    YLS   +    + +L    A+
Sbjct: 167 ITCIELTGEAKILVSQTVKPMEIYFIAAIYYLSFVSIATWILKKLETLYAI 217



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 31/76 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +    +  G + +  L     I   ++G  +G  R+   + +  +  ++  +FR +P 
Sbjct: 9   TQTVVPTLNKGLLVSIALIIPSAIIGFLLGVCIGIIRVFGKRWLQRLGNIFTLIFRGVPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
            V +  LY  + ++  
Sbjct: 69  TVQLMILYFGLPNINI 84


>gi|255745378|ref|ZP_05419327.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholera CIRS 101]
 gi|262153519|ref|ZP_06028648.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae INDRE 91/1]
 gi|255737208|gb|EET92604.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholera CIRS 101]
 gi|262030646|gb|EEY49281.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae INDRE 91/1]
 gi|327484414|gb|AEA78821.1| Arginine/ornithine ABC transporter, permease protein AotQ [Vibrio
           cholerae LMA3894-4]
          Length = 246

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------PVLGQFNF 256
             R     +    + +P L +   + FG   L+   L +   F         P      +
Sbjct: 46  WARAIATLYTTIIRGIPDLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAY 105

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LL
Sbjct: 106 LPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILL 165

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  IP   + +L LLK ++L   +G  D+V +       T       +    I+L 
Sbjct: 166 PQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLF 225

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + +    +  L  K ++  +
Sbjct: 226 FTSVSTGLLKLLERKFSIHTR 246


>gi|311895157|dbj|BAJ27565.1| putative glutamate ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 285

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 101/251 (40%), Gaps = 26/251 (10%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           ++   +           +      +    L     T+       +F+   G + +     
Sbjct: 37  WVVYMLFHTEQFTYQKWMPFEYKGVQELLLRGLGNTLRAFGWTVLFALPFGALFA----- 91

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    +  + +  + +  F                     P+L    FI  +  +P  
Sbjct: 92  AGRLSEHRAVRWVSTVVVEFFR------------------AMPLLVMIFFIFVALKAPPM 133

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L   L+ Y  + +AE+ R+G++AVPRGQ EAA ALGL   +    VL+PQA R+++P 
Sbjct: 134 WALVAGLALYNGSVLAEVFRAGVLAVPRGQKEAAYALGLRKTQVMAYVLVPQANRAMLPA 193

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSLSIMIAL 383
           + SQ +  LK++SL   + + + +  G  I          I ++++   +Y+ + ++++ 
Sbjct: 194 IVSQLVVALKDTSLGFLITYEEFLHAGKLIATNLDYDLPFIPVVMVIAPVYIGMCLLLSW 253

Query: 384 FMNRLNAKIAL 394
           F   L  +   
Sbjct: 254 FAKWLERRGRR 264



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 38/71 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT       ++ A   G L  AGRLS ++ V W+  V VE FR +P LV+IFF+
Sbjct: 65  LLRGLGNTLRAFGWTVLFALPFGALFAAGRLSEHRAVRWVSTVVVEFFRAMPLLVMIFFI 124

Query: 149 YKSVLSVLPIP 159
           + ++ +     
Sbjct: 125 FVALKAPPMWA 135


>gi|288905199|ref|YP_003430421.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|306831269|ref|ZP_07464429.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978173|ref|YP_004287889.1| polar amino acid ABC transporter membrane protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288731925|emb|CBI13490.1| Putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
 gi|304426505|gb|EFM29617.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178101|emb|CBZ48145.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 213

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + V S   G VL+            K  + L  LY+  +++ G P L
Sbjct: 12  LDGAKVTLQVFCIVIVLSIPFGAVLAFLMQ-----IKFKPLQWLLTLYV--WIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                 V     +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGVVMDRLPAAILAFTLNYAAYFAEIFRGGIAAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +    ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + +   IYL +  ++ L   +   K 
Sbjct: 174 AANRDA-TLAPMFVAGAIYLLMIGVVTLISKQTEKKF 209



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +   G ++        K + W+  +YV + R  P L+ + F 
Sbjct: 11  LLDGAKVTLQVFCIVIVLSIPFGAVLAFLMQIKFKPLQWLLTLYVWIMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV  + D          LN              A 
Sbjct: 71  YYVLPSVGVVMDRLPAAILAFTLNYAAYFAEIFRGGIAAI 110


>gi|295676193|ref|YP_003604717.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295436036|gb|ADG15206.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 237

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 91/230 (39%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +      +F + + LS   +T+          FV  + L++      R            
Sbjct: 6   NQFWKAYLFWDGQRLSGLAVTLWLLVASIAIGFVCAVPLAVARVSKKRWLSTPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             + T++  G P  V + L Y   +    +   + +  +     F    +A +  T A+ 
Sbjct: 60  -RLYTYVFRGTPLYVQLLLIYTGVYSLAFVRSHSLLD-AFFRSGFHCAILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + +   G++EAA A G++     R +++P A+R  +P  +++ + +L  +++A
Sbjct: 118 TEIFAGAIRSTSHGEVEAARAYGMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V   + + T Q+     +   IYL +S  +     R   +
Sbjct: 178 FTATVPDILKVARDVNSATYQSFNAFGLAALIYLVVSFALVALFRRAERR 227



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 2/101 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASIAIGFVCAVPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             V S+      S  L    F +    +     ++T A   
Sbjct: 80  TGVYSLAF--VRSHSLLDAFFRSGFHCAILAFALNTCAYTT 118


>gi|227873127|ref|ZP_03991419.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
 gi|227841021|gb|EEJ51359.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Oribacterium sinus F0268]
          Length = 216

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 91/188 (48%), Gaps = 10/188 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R         +  +YIS   + G P ++ + + Y   +       + F         
Sbjct: 36  AFGRMHKNPLISGIIKIYISF--MRGTPLMLQLFMVYYGPY-------YIFKVSLHPGYR 86

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             ++YI      AA+ AEI RSG+ ++ RGQ EAA  LG +  +    ++LPQ  + I+P
Sbjct: 87  MTAVYIGFILNYAAYFAEIYRSGIQSMDRGQYEAAEILGYSKMQCFFRIILPQVWKKILP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +T++ ++L+K++SLA ++   ++ +    + + +  ++  +++   +Y   + ++A  M
Sbjct: 147 SITNEVISLVKDTSLAFSISVMEMFTQAKAL-SSSQSSMFPLIMAGVLYYIFNFVVAFIM 205

Query: 386 NRLNAKIA 393
            ++  K+A
Sbjct: 206 EQMEKKMA 213


>gi|163734791|ref|ZP_02142229.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
 gi|161391896|gb|EDQ16227.1| glutamate/aspartate ABC transporter, permease protein [Roseobacter
           litoralis Och 149]
          Length = 218

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 13/228 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L F    +  +  +   S + GIVL      L+R    K    +   Y++
Sbjct: 3   DFDFNLIWDSLPFLWQGLQLSLWLTFLSIIGGIVLGTLL-ALARLSGIKPLAMVAATYVN 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                      LI + +   F  P+               F S  IA   + AA+ +EI+
Sbjct: 62  LIRSVP-----LILVIFWFFFLVPLAIG-------RPIGSFYSALIAFVLFEAAYYSEIM 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V +GQ+ A  + GL + +  R V+LPQA R++IP L +Q + L +++SL   V 
Sbjct: 110 RAGIQSVKQGQVHAGQSTGLNYWQIQRYVVLPQAFRNMIPILVTQCIILFQDTSLVFVVS 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             D ++    +    G+ +E+ L    +Y  +    ++ +  L ++++
Sbjct: 170 LRDFMTASSIVARTEGRLVEMYLFAAVVYFVICFSGSMLVRSLKSRMS 217



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 39/82 (47%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         +  G   + WL F  +I   ++GTL+   RLS  K +A +   YV + R
Sbjct: 5   DFNLIWDSLPFLWQGLQLSLWLTFLSIIGGIVLGTLLALARLSGIKPLAMVAATYVNLIR 64

Query: 138 NIPPLVVIFFLYKSVLSVLPIP 159
           ++P ++VIF+ +  V   +  P
Sbjct: 65  SVPLILVIFWFFFLVPLAIGRP 86


>gi|42518678|ref|NP_964608.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii NCC 533]
 gi|41582964|gb|AAS08574.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii NCC 533]
          Length = 216

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFVLG+VL        ++     G    
Sbjct: 2   ENFIHAYSWINIRFLLQGLWVTIYVSLISIALSFVLGLVLGFIRYVKIKYLSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          ++   ++  IAL  +  A 
Sbjct: 58  ------FVIDIIRNLPLLLIIFFTYFGLPEL--------GIITNPTVASIIALVVFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ AV  GQME A + G+T+ +A   V++PQA+  +IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIAAVDPGQMEGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   +++    L +K 
Sbjct: 164 ATIIVLPELLFHAQIIYSQNTTYLIPMYVIIAIMYFIVCFSLSMVAKHLQSKY 216



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 36/76 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T +++   +  + ++G ++G  R    K ++ I    +++ RN+P 
Sbjct: 9   SWINIRFLLQGLWVTIYVSLISIALSFVLGLVLGFIRYVKIKYLSAIVGFVIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           L++IFF Y  +  +  
Sbjct: 69  LLIIFFTYFGLPELGI 84


>gi|238783037|ref|ZP_04627064.1| ABC-type amino acid transport system permease component [Yersinia
           bercovieri ATCC 43970]
 gi|238716038|gb|EEQ08023.1| ABC-type amino acid transport system permease component [Yersinia
           bercovieri ATCC 43970]
          Length = 254

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      ++P   +   A   + S + G+  ++  T L        G    +L       
Sbjct: 10  WSYLLWGTYPDGPLGGAALTVLISIMAGVASAILGTLLGVALAMSRGVWAGILAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGAGQWQAGLSLGFNRWQVLGFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLALDLLANGLNRRFS 224


>gi|317406070|gb|EFV86334.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 272

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 11/224 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +  N +I V +  LG  L L    LS     +  + L   Y+  F    +
Sbjct: 55  WHWSPALLRGLGMNVQISVLAMALGTALGLVVGALS-LSPSRPLRRLTRAYVLAFRNAPI 113

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV     Y   +  P   + N  G +   P+++ + I L    +A +AEI R  + ++
Sbjct: 114 LVLV-----YFTTYVFPF--ELNLGGWNLPFPDWIKVVIGLGLPASANVAEIFRGAIQSI 166

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-- 350
           P  Q EAA +L     +  R+++LPQ +R ++P   + Y ++  ++SLA  VG  DLV  
Sbjct: 167 PEAQWEAAQSLAFRRAQIFRMIVLPQCVRRMLPSWMNLYASITMSTSLASLVGVHDLVDT 226

Query: 351 -SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +V    + ++   + +    + ++ +    IA +   L  + A
Sbjct: 227 ATVASNTVARSDFTVLVYFTLLALFFAYCYPIARWTRHLERRYA 270



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 41/87 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             ++ A+L G      ++   M   T +G +VGA  LS ++ +  + R YV  FRN P L
Sbjct: 55  WHWSPALLRGLGMNVQISVLAMALGTALGLVVGALSLSPSRPLRRLTRAYVLAFRNAPIL 114

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V+++F        L +   ++  P  +
Sbjct: 115 VLVYFTTYVFPFELNLGGWNLPFPDWI 141


>gi|306825322|ref|ZP_07458664.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432758|gb|EFM35732.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 213

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +   +    L+  ++T+   A + +FS  LGIV++       +  H        L+ +
Sbjct: 1   MSYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFALQVRWKPLHY-------LIDL 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                       +  IA     AA+ AEI
Sbjct: 54  YIWVMRGTPLLLQLIFIYYV-----------LPSIGIRLDRLPAAVIAFVLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+  +P+GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+
Sbjct: 103 FRGGIETIPKGQYEAAKVLKFSSFDTVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +DL+    T  N+    + + L    IYL +  ++ +   +L  K +   
Sbjct: 163 GISDLILASRTAANRDASLVPMFL-AGAIYLIMIGLVTIIAKKLEKKYSYYR 213



 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 4/94 (4%)

Query: 84  SYATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           SY   IL   +N    T  +    +I +  +G +V        K + ++  +Y+ V R  
Sbjct: 2   SYMFEILPSLLNGASMTLQVFALVLIFSIPLGIVVAFALQVRWKPLHYLIDLYIWVMRGT 61

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           P L+ + F+Y  + S+    D          LN 
Sbjct: 62  PLLLQLIFIYYVLPSIGIRLDRLPAAVIAFVLNY 95


>gi|259907962|ref|YP_002648318.1| Putative ABC transporter, permease [Erwinia pyrifoliae Ep1/96]
 gi|224963584|emb|CAX55076.1| Putative ABC transporter, permease [Erwinia pyrifoliae Ep1/96]
          Length = 289

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 15/262 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +F L   V SV   P     +    F     LS    T+       V S +L      
Sbjct: 17  IALFILAIVVQSVAFNPRWEWSVFAHWFFAPAILSGLGQTLLLTLTASVLSVLLA----- 71

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGST 261
               L+R         L   YI  F    L  +++I   +  L+    +   F  +  +T
Sbjct: 72  ----LARLSPSWLLSGLAFSYIWLFRSLPLILVLIILYNFSYLYDRLSLGVPFTPLTLAT 127

Query: 262 VSP-----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                   +F +  I L+   AA+ AEIVR G+  V  GQ EAA ALGL   + T  ++L
Sbjct: 128 WKTIDVLGQFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLRIIL 187

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R+IIP   ++ ++L K +++   +   +L      + N+T Q I ++++    YL 
Sbjct: 188 PQALRAIIPGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVWYLL 247

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           ++ ++++  + +   +A    +
Sbjct: 248 ITTLLSVVQHYVERWLARGTTR 269


>gi|293401053|ref|ZP_06645198.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306079|gb|EFE47323.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 255

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 93/221 (42%), Gaps = 4/221 (1%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +         + +L ++ + F   +           +         I      
Sbjct: 15  WWIFQNNIPLLWYGIKITLMLAVLGTFFGLLIGLVLGGVRAVKIEPRDRMPIRIVKRILH 74

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTV----SPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            ++A+        P++ Q  F+  +          ++  + +S  T A+++EI+R+G+ +
Sbjct: 75  SIVAVYVWFFRGTPMMVQAMFLYYALRPYLGWSANVAGVVIISVNTGAYMSEIIRAGIQS 134

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ+EAA +LG+T+ +    ++LPQA+R+  P L ++ +  +K+SS+   +G  +L  
Sbjct: 135 IDKGQIEAARSLGMTNTQTMTAIVLPQAIRNSFPSLGNELIVNIKDSSMLNVIGVMELFF 194

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              ++        E  L    IYL L+    L +  +  ++
Sbjct: 195 QSSSVAGSMMLFTETFLSTCVIYLLLTSAATLLLTWIEKRL 235


>gi|149201668|ref|ZP_01878642.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144716|gb|EDM32745.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 291

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 90/224 (40%), Gaps = 11/224 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                      N  I V S ++G V+ +F   L +    +  +    L    F       
Sbjct: 75  WTPTLAKGFGFNVLISVLSMLIGTVMGVFLGVL-QVSQIRPIRQSAWLVTQFFRNSPWLV 133

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+        +    +  QF   G     P ++   I LS    A+ +E +R  ++++P 
Sbjct: 134 LL-------FYCILLIPFQFEIFGVKIPFPGWIKAVIGLSLPVMAYTSEFMRGAILSIPT 186

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E+A +LG + R     ++LPQ ++ ++P   + Y  L   + L   +G  D++++  
Sbjct: 187 GQWESAESLGFSRRMTLTNIILPQTVKRVLPSWMNLYAVLTMATPLVSIIGVDDVMALTR 246

Query: 355 TIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++  G+A   I + L  +  +      I+     L  K ++K
Sbjct: 247 AALSAEGRADLLIPMYLYILSWFFLYCYPISSLTRVLERKYSVK 290



 Score = 43.8 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  GF     ++   M+  T++G  +G  ++S  + +     +  + FRN P LV+
Sbjct: 75  WTPTLAKGFGFNVLISVLSMLIGTVMGVFLGVLQVSQIRPIRQSAWLVTQFFRNSPWLVL 134

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+    +     I    I  P  +
Sbjct: 135 LFYCILLIPFQFEIFGVKIPFPGWI 159


>gi|56697508|ref|YP_167876.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56679245|gb|AAV95911.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 267

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 8/255 (3%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL++  F           P  + V  +      +  +    T+  +    VFS ++G+V 
Sbjct: 15  PLMLDAFSEFFRQLAEDYPRWNFVFFYQPVQAGKIWTGLQYTVILSLACLVFSVIIGVVG 74

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +            +  + L   YI  F         L+   + L    P      ++   
Sbjct: 75  AWLQG-----SKRRLLRNLVQGYIQLFRNTPPFV-QLLFFYFALGQLTPTYSPDGWLEVP 128

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +S    +  I+LS +  AF  EI RSG+ AVP   +EA+ ALG+T  +    V+LP A 
Sbjct: 129 IISNVGWA-IISLSFFAGAFNVEIFRSGIEAVPDATIEASEALGMTRLQTYSHVILPLAF 187

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSI 379
           R  +P L +  +NL+K ++ A A+   +L+    TI N    A    +L+   +Y+ L  
Sbjct: 188 RVSLPALNNNLVNLIKTTTQAFAIAVPELLYQAVTIWNDYPSAQYPAMLLLFVVYIGLVG 247

Query: 380 MIALFMNRLNAKIAL 394
           ++ L MNR    +A+
Sbjct: 248 IMVLGMNRWERHLAI 262



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 43/104 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  L+ + ++ + IIG +    + S  +L+  + + Y+++FRN PP V + F 
Sbjct: 49  IWTGLQYTVILSLACLVFSVIIGVVGAWLQGSKRRLLRNLVQGYIQLFRNTPPFVQLLFF 108

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           Y ++  + P       L   +  N                + +F
Sbjct: 109 YFALGQLTPTYSPDGWLEVPIISNVGWAIISLSFFAGAFNVEIF 152


>gi|322386191|ref|ZP_08059824.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269771|gb|EFX52698.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 228

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + + +L  + +L    L + +  +  +   ++Y++         L+L      
Sbjct: 18  PVTLIIMIVAILLSFIPALLL-ALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                     +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQFFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     + + Q 
Sbjct: 137 GLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKDITALAKVEASHSYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   IYL +  +I      L  + AL
Sbjct: 197 SESYLVIFVIYLIICGLIQWMFRSLEKRYAL 227



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + I   L+  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGIPVTLIIMIVAILLSFIPALLLALGQIYKVRGVRTFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
               S+L     S+     +F  N       + 
Sbjct: 74  SLFPSLLNQFFKSLGSQVDVFKFNPLYYAFIIY 106


>gi|306829413|ref|ZP_07462603.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304428499|gb|EFM31589.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 213

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 101/221 (45%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+  ++T+   A + +FS  LGI+++          H K    L  LYI  +++ G P L
Sbjct: 12  LNGASMTIQVFALVLIFSIPLGIIIAFALQ-----IHWKPLHYLIDLYI--WVMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +P+G
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAVIAFVLNYAAYFAEIFRGGIETIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFSPVATVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL +  ++ +   +L  K +   
Sbjct: 174 AANRDANLVPMFL-AGAIYLIMIGLVTIVAKKLEKKYSYYR 213


>gi|110636300|ref|YP_676508.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110287284|gb|ABG65343.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chelativorans sp. BNC1]
          Length = 234

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/225 (22%), Positives = 93/225 (41%), Gaps = 14/225 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +         +          T   + + +   G  + +    L RH      +     Y
Sbjct: 1   MYFMQFGWLWQNYDTLLYGALTTILLTIGACAAGSAIGIIVG-LCRHRGNLLLRTCGAAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +    I   P LV   + Y           F             +  +AL     A+ AE
Sbjct: 60  VEA--IRNTPLLVQAFIIY-----------FGLSSVGFRLDPLPAALVALVINCGAYSAE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R+G  ++P  Q EAA +L L+  +    V+LPQA+R+I  PL+ Q++ ++  SS+   
Sbjct: 107 IFRAGFQSIPPAQKEAAESLALSKIQTFVYVILPQALRNIWVPLSGQFILIMLASSIVSQ 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +   +L +    I +QT ++ E+ ++   +YL+LSI++   + R+
Sbjct: 167 ISAEELTAAASQIQSQTFRSFEVYVVLAALYLALSIVLKTVLVRM 211



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 34/90 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L G + T  L        + IG +VG  R   N L+      YVE  RN P L
Sbjct: 10  WQNYDTLLYGALTTILLTIGACAAGSAIGIIVGLCRHRGNLLLRTCGAAYVEAIRNTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           V  F +Y  + SV    D        + +N
Sbjct: 70  VQAFIIYFGLSSVGFRLDPLPAALVALVIN 99


>gi|308185548|ref|YP_003929679.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056058|gb|ADO08230.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 268

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 15/193 (7%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +    LY   F       L ++ +   L      L       G T  P     
Sbjct: 55  ISPSRWLRLPARLYTDLFRGL-PSILTILLIGQGLARFSYQLF------GPTPYPL---G 104

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
             ALS   +A++ EI R+G+ +V RGQMEA  ALG+++ +A RLV++PQ +R ++P + +
Sbjct: 105 IFALSLIASAYMGEIFRAGIQSVERGQMEACRALGMSYGRAMRLVVIPQGIRRVLPAIVN 164

Query: 330 QYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           Q++ ++K+SSL   +G      +L  VG      TG  +  +++    YL +++ +   +
Sbjct: 165 QFIAIIKDSSLVYLLGLMTQQRELFRVGQDAAVLTGN-LSPLMLAGLFYLIITVPLTHMV 223

Query: 386 NRLNAKIALKEKK 398
           N ++ +     ++
Sbjct: 224 NYVDVRYRTGRRR 236


>gi|206580810|ref|YP_002238437.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|290509461|ref|ZP_06548832.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
 gi|206569868|gb|ACI11644.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|289778855|gb|EFD86852.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
          Length = 218

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                        +       + S V     +L    L         +   L+     L 
Sbjct: 1   MTTFTDWDIIRNLLLAGRWTVLLSLVAFTGGALVTLPLLLLRLTGGRQVKRLIRGYIELF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ YT+AF+ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGVALFGIDVSAWTAASVALTLYTSAFLLDIWFGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+  LGL+  +    V+ PQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 RALPKGQWEASRCLGLSFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 170 TKAGTMLTNVTYQPFKVFALVALGYFILCYPLSRYSRYLENKF 212


>gi|25011698|ref|NP_736093.1| hypothetical protein gbs1658 [Streptococcus agalactiae NEM316]
 gi|24413238|emb|CAD47317.1| Unknown [Streptococcus agalactiae NEM316]
          Length = 221

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 14/231 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    F + L  +        +     + +  F+LG ++  F   L +  H +  + L  
Sbjct: 3   NWDAIFNLELAVKAFPSVIQGLPYTIGLSLVGFILGAIVGFFV-ALMKMSHLRLLRYLAN 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           ++IS  L+ G+P +VL+ L Y           F             +  +  +  ++A+I
Sbjct: 62  IHIS--LMRGIPLMVLLFLIY-----------FGLPFIGIQLDAVTASIVGFTMMSSAYI 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+ L+AV  GQ EAA ALGL      R +++PQA R  +P L++  L+++K SSL 
Sbjct: 109 SEIIRAALLAVDHGQWEAARALGLKTPTIYRGIIIPQATRIALPSLSNVLLDMVKGSSLT 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   D+ +    +       +   ++   IY  +  + A+  +    ++
Sbjct: 169 AMITVPDIFNNAKIVGGTYSDYMTAYILVALIYWVICTLYAIIQDWWEKRL 219



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 41/98 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L+  G I   I+G  V   ++S  +L+ ++  +++ + R IP +V++F +Y
Sbjct: 21  IQGLPYTIGLSLVGFILGAIVGFFVALMKMSHLRLLRYLANIHISLMRGIPLMVLLFLIY 80

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             +  +    D       G  + +       +     A
Sbjct: 81  FGLPFIGIQLDAVTASIVGFTMMSSAYISEIIRAALLA 118


>gi|260462071|ref|ZP_05810316.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259032318|gb|EEW33584.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 224

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 15/208 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S  +GI + L    L R +  K  + L + Y   F    +  +VLI + Y L F    
Sbjct: 32  ILSIGIGIPIGLVI-SLLRLYAPKPLRWLAVGYTDIFRALPV-LVVLILIYYALPFLGIR 89

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L              + S   A +   +A+ AE+ RSG+ ++PRGQ EA+ ALGL     
Sbjct: 90  L------------SSWASAVTAFAIIMSAYSAEVFRSGIESIPRGQFEASQALGLPFLLT 137

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+R +IPP+TS  +++ K++SLA  V   +L+       +        ++  
Sbjct: 138 LRKVVLPQAIRVVIPPMTSNCVSMFKDTSLASTVALPELLKEATNAQSLYANP-SPLIGA 196

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +YL     +   ++ L  +   ++ +
Sbjct: 197 ALVYLIFLWPMVRLVSLLEDRFKTEKTR 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L GF+NT  L    +     IG ++   RL A K + W+   Y ++FR +P LVV+  
Sbjct: 19  ALLRGFLNTLLLGILSIGIGIPIGLVISLLRLYAPKPLRWLAVGYTDIFRALPVLVVLIL 78

Query: 148 LYKSVLSVLPIPDHSIV 164
           +Y ++  +         
Sbjct: 79  IYYALPFLGIRLSSWAS 95


>gi|116254868|ref|YP_770704.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259516|emb|CAK10654.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 235

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 2/172 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+         +PTLV + L Y   F    +        +  + E +   I L    AA
Sbjct: 57  PLVAAYVSYHRNVPTLVQLMLWYFGIFTL--MPSGVAEWLAVHNAEAIFAVIGLGLCQAA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + +E +RSG+ +V  GQM+AA ALG  +  A R V++PQ +R+ +PPL +  ++L KNSS
Sbjct: 115 YFSEDLRSGVRSVSPGQMQAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLFKNSS 174

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LAV +G ++L      I N + +  E+ LI   +YL  S++I      L+ +
Sbjct: 175 LAVVIGASELTHAVKEIENLSFRTFEVYLIGTVLYLFFSLVIMSIGAYLSMR 226


>gi|296877227|ref|ZP_06901267.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296431747|gb|EFH17554.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 230

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 112/236 (47%), Gaps = 8/236 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++ + +      L      +     +   + VLG    L  T  ++   +K G  L   Y
Sbjct: 1   MVSYDISKVWSFLPTLVQALPATLALMFLTTVLGSAFGLVLT-WAQVSEDKVGAGLAKGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T           I L + + +  P    +          +F+ + +A+    AA I+E
Sbjct: 60  VFTLRCTPP-----IVLLFLVFYGLPQFLNWWLGIDIDHWSKFVFVLVAMFLLFAAMISE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + ++  +A+P+GQMEA +++GLT  +    ++LPQA R  +P +T+  LNL+++++LA  
Sbjct: 115 VFKAAYLAIPKGQMEAGLSIGLTPAQTIWRIVLPQAFRVALPNMTTAILNLMRDAALAYT 174

Query: 344 VGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GF D++  G  +I++     ++E       IY  ++++I+     L  ++++ E+
Sbjct: 175 IGFIDIMGAGNNLISRNLGNYSLETYTAVAVIYWGIALVISFSAQLLEKRLSVTER 230


>gi|294851192|ref|ZP_06791865.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|294819781|gb|EFG36780.1| polar amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 314

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 14/261 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR   P      +   + +   I      + F +             + TN  I + + +
Sbjct: 67  FRQTCPSGSPVSVTARMTNHPTITSKETTMDFSVSALGGAFPQLLPAIGTNLVISIIAMI 126

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L ++     T L R        A+  + IS   I G P LV I L Y   +  P L    
Sbjct: 127 LALIGGTALTIL-RTLGIAPLNAVIGVVISF--IRGTPILVQIFLFY---YGLPAL---- 176

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G  +SP   +  +A++  ++ FI EI+R GL  +  G +EAAIALG+  +     V+
Sbjct: 177 ---GLDLSP-IQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWTKVI 232

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ    I+PPL ++   ++K ++L   +   +++     + N + + +E +L    I  
Sbjct: 233 LPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETLLCAAIILF 292

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           +++++++     L  + A + 
Sbjct: 293 AVNLVLSQCGRVLEMRFAARR 313



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 8/191 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L        ++   MI A I GT +   R      +  +  V +   R  P LV IF  
Sbjct: 110 LLPAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISFIRGTPILVQIFLF 169

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFAT 205
           Y  + ++             +  N+       +       ++     +  LGI   +  T
Sbjct: 170 YYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWT 229

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           ++     +   + +P L      I     L+ +    ++      +   +F    T+   
Sbjct: 230 KV--ILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETL--- 284

Query: 266 FMSLYIALSCY 276
             +  I  +  
Sbjct: 285 LCAAIILFAVN 295


>gi|237808336|ref|YP_002892776.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500597|gb|ACQ93190.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 238

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 93/218 (42%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +     + V S V G +L+L    ++R   +K       ++  T++  G P
Sbjct: 14  WSDGYRFTGVAVTMWLLVLSLVFGFMLAL-PMSIARVSQKKAL--WMPVWFYTYIFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + + Y   +   ++   +F+        F    +AL+  T A+  E++   + A+P
Sbjct: 71  LYVQLLVFYSGVYTLSIVKDVDFL-NLFFRSGFNCTVLALALNTCAYTTEMLAGAIRAIP 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G +     R +++P A+R  +P  +++ + +L  +SLA      D++ + 
Sbjct: 130 HGEIEAARAYGFSGFTLYRSIIIPSALRRALPAYSNEVILMLHATSLAFTATVPDILKIA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +   T ++         IYL +S ++         +
Sbjct: 190 RDVNAATYKSFHAFGTAAAIYLIISFLLVGLFRLAEKR 227


>gi|218133963|ref|ZP_03462767.1| hypothetical protein BACPEC_01852 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991338|gb|EEC57344.1| hypothetical protein BACPEC_01852 [Bacteroides pectinophilus ATCC
           43243]
          Length = 230

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 16/228 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG-- 231
             LS   +T+       +  F+LG ++ +              K +  L    F ++   
Sbjct: 1   MFLSGTWITLYVAIIGTIIGFLLGFLIGVIEDVQINREDNIFKKIIIKLVKIIFAVYVEV 60

Query: 232 ---LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
               P +V   + Y               GGS       +  +     T A++AE VR+G
Sbjct: 61  FRDTPMIVQAMVIYY---------GIRLAGGSI--SPIPAGILVTFLNTGAYMAETVRAG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++  GQ E A+ALG++  KA  +V++PQA R+IIP + + +L  LK +S+   +G ++
Sbjct: 110 IKSIDVGQREGALALGMSPLKAMVVVIIPQAFRNIIPEMANMFLTNLKMTSVLNVIGVSE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L  V  T      +  E  L+   I+  L  +       L  K+A K+
Sbjct: 170 LFLVAKTTGAIYYRYFEAYLLIAVIFFVLCFIFNRLFLILEKKLAAKK 217


>gi|237799755|ref|ZP_04588216.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022610|gb|EGI02667.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 277

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 16/256 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
             +    ++          D  + +      N  GL          A + +F  +  I++
Sbjct: 28  LYLTWLVMFVLFAGFFLSFDLKLSIILDKLPNLIGLHLAPNGFLQGAALTLFVSLCSIIV 87

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           S+   F T L+R         +   Y S F    L          Q+      L Q   +
Sbjct: 88  SVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLI--------QILLIYLGLPQVGIV 139

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G+      M+  IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LP
Sbjct: 140 PGAI-----MAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLP 194

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +
Sbjct: 195 QAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIM 254

Query: 378 SIMIALFMNRLNAKIA 393
           SI + L  +RL     
Sbjct: 255 SIGLELLQSRLERHYG 270



 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +++   +I + ++G +    RLS++ +   I   Y   FR  P L+ I  +
Sbjct: 70  FLQGAALTLFVSLCSIIVSVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLI 129

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  V  +P   +     + LN 
Sbjct: 130 YLGLPQVGIVPGAIMAGVIALSLNY 154


>gi|28869033|ref|NP_791652.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|28852273|gb|AAO55347.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 232

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S+             
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKKPWVNVP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|229514448|ref|ZP_04403909.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
 gi|229348428|gb|EEO13386.1| amino acid ABC transporter permease protein [Vibrio cholerae TMA
           21]
          Length = 298

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 113/267 (42%), Gaps = 14/267 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  L+   +    V                    +  L +    +    ++ ++  VL +
Sbjct: 25  IASLIGWLYYRSEVGIHYQWHWREAWTLIFTPRADGSLPYFVQGLGATLRLSLWGMVLAL 84

Query: 199 VL-----------SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--- 244
           VL           + F    +  F +      PL+++  F  F    L+ +    +L   
Sbjct: 85  VLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRN 144

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +  +        +G + +    +S  + +   ++A+IAEIVR+GL  +P+GQ EAA +LG
Sbjct: 145 YRTEVHPLITLLLGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L      R V+ PQ + +I P L  Q ++L+K++S+   +   +L  VG  I N +G   
Sbjct: 205 LPTWVKYRYVIAPQVLTAITPALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIF 264

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           EI LI    YL L + +++   ++  +
Sbjct: 265 EIWLIVGAAYLVLCLSLSMLFKQVERR 291



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 18/191 (9%)

Query: 57  LSLGIGFLSERAGFEI--------DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPAT 108
           ++  IG+L  R+   I           ++            + G   T  L+  GM+ A 
Sbjct: 25  IASLIGWLYYRSEVGIHYQWHWREAWTLIFTPRADGSLPYFVQGLGATLRLSLWGMVLAL 84

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL----------SVLPI 158
           ++G+L+G  R      V      +V++ RNIPPLV +F  Y  +            +L  
Sbjct: 85  VLGSLIGIARSQKAWFVRLPANAFVQLVRNIPPLVFVFIFYFFISNQLIPLLGLDELLRN 144

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               +     + L    L    L+      +   +++  IV +  A      +       
Sbjct: 145 YRTEVHPLITLLLGPARLWENLLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLG 204

Query: 219 LPLLYISTFLI 229
           LP      ++I
Sbjct: 205 LPTWVKYRYVI 215


>gi|86358032|ref|YP_469924.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282134|gb|ABC91197.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 268

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 5/217 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + +  +G+V+  F   L +   EK+ +    +Y + F   GLP L+ + + Y 
Sbjct: 54  QVTVSVAIVTLPIGLVIG-FLVALGQQSEEKSLRLAAGIYTTIF--RGLPELLTLFIIYY 110

Query: 244 LH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                 + +L    ++G       F++  IALS   +A+ +E++ S   A+P+GQ EA  
Sbjct: 111 GMQMLIQSLLELAGYVGPPVEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGD 170

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL   +  RLV+LPQ +R  +P LT+ ++ LLK++S    +  AD++      +  T 
Sbjct: 171 SLGLHRGRTLRLVILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTK 230

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +      I   +YL L+I+ +  +  ++      E +
Sbjct: 231 EPFFFYGIACCLYLVLAILSSFLLAYVDRWAKRSEVR 267



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 7/169 (4%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q  +    D+ +   I +G   T  +A   +    +IG LV  G+ S  K +     +
Sbjct: 32  LGQSTILACGDTGWGDEIALGLQVTVSVAIVTLPIGLVIGFLVALGQQSEEKSLRLAAGI 91

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR +P L+ +F +Y  +  ++                N  L+         A   V
Sbjct: 92  YTTIFRGLPELLTLFIIYYGMQMLIQSLLELAGYVGPPVEINAFLAG------VIALSVV 145

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           FS     VL L A R       + G +L L    T  +  LP LV IAL
Sbjct: 146 FSAYCSEVL-LSAFRAIPKGQYEAGDSLGLHRGRTLRLVILPQLVRIAL 193


>gi|86357759|ref|YP_469651.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86281861|gb|ABC90924.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 232

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 1/161 (0%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F+  G P LV + L Y          Q   + G    P +    +AL+  TAA+ +EI
Sbjct: 56  YVFVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFFREP-YWCAVLALTLNTAAYCSEI 114

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL+AV   ++EAA A G++     R ++LP A+R  +P   ++ + ++K ++LA  +
Sbjct: 115 FRGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGNEIILMIKATALASVI 174

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++  + G +I  + +A EI ++   IYL++  ++   +
Sbjct: 175 TIMEVTGLAGKLIADSFRAFEIFIVAGAIYLAIIFIVTRML 215


>gi|295835694|ref|ZP_06822627.1| glutamate permease [Streptomyces sp. SPB74]
 gi|197698112|gb|EDY45045.1| glutamate permease [Streptomyces sp. SPB74]
          Length = 298

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 7/158 (4%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                PVL    F+  +       +L   L+ Y  + +AE+ RSG+ +V RGQ EAA AL
Sbjct: 119 FFRAMPVLVMIFFVFIALKVQPLPALVTGLTLYNGSVLAEVFRSGIASVDRGQREAAYAL 178

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +    +L+PQA+R+++P + SQ +  LK++SL   + + + +  G  I +     
Sbjct: 179 GMRKTQVMAYILIPQAVRAMLPSIISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYD 238

Query: 364 IEIILIWMFI---YLSLSIMIALFMNRLNAKIALKEKK 398
           +  I + M I   Y+ + ++++   + L    A +E++
Sbjct: 239 LPFIPVVMVIAPLYIGMCMVLSWLAHLL----ARRERR 272



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT        + A  +GTL+  GRLS ++ V W     VE FR +P LV+IFF+
Sbjct: 73  LLRGLGNTLKAFAISAVLALALGTLLAVGRLSEHRPVRWPATALVEFFRAMPVLVMIFFV 132

Query: 149 YKSV 152
           + ++
Sbjct: 133 FIAL 136


>gi|312139384|ref|YP_004006720.1| glutamate abc transporter integral membrane subunit glud
           [Rhodococcus equi 103S]
 gi|325672735|ref|ZP_08152431.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Rhodococcus equi ATCC 33707]
 gi|311888723|emb|CBH48035.1| putative glutamate ABC transporter integral membrane subunit GluD
           [Rhodococcus equi 103S]
 gi|325556612|gb|EGD26278.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Rhodococcus equi ATCC 33707]
          Length = 307

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 15/256 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + ++ L     +     D               L     T+   A   VF+ +LG +L +
Sbjct: 34  LALYVLNVLADNGQLEADKWSPFLDHFTWTTYLLPGLKGTLLAAALSIVFALILGAILGI 93

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    +  + L    +  F    +P L+L+   YQ         Q+     S +
Sbjct: 94  -----GRLSDHRWVRWLSGAIVEFF--RAIPVLILMIFAYQAF------AQYGVFPSSQL 140

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                ++ + L+ Y  + IAEI+R+G++++P+GQ EAA ALG+   +  RL+LLPQA+ +
Sbjct: 141 --ALAAVVVGLTLYNGSVIAEIIRAGILSLPKGQTEAASALGMRKSQMMRLILLPQAITT 198

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P L SQ +  LK+S+L   +G+ +L+  G    +        +++   I + ++  + 
Sbjct: 199 MLPALVSQMVVALKDSALGYQIGYIELIRSGQQAASYYRNFFAALIVVGVIMVIINFALT 258

Query: 383 LFMNRLNAKIALKEKK 398
            F   L  ++    KK
Sbjct: 259 SFATWLEKRLRTGGKK 274



 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R+ N  + I+  ++L  + L+ +N + +N +                        P+  
Sbjct: 16  ARIRNRIIAIVFGIVLVALALYVLNVLADNGQLE-----------------ADKWSPFLD 58

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++ T +L G   T   A   ++ A I+G ++G GRLS ++ V W+    VE FR IP 
Sbjct: 59  HFTWTTYLLPGLKGTLLAAALSIVFALILGAILGIGRLSDHRWVRWLSGAIVEFFRAIPV 118

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+++ F Y++       P   + L   + +     +   +     A I           S
Sbjct: 119 LILMIFAYQAFAQYGVFPSSQLALA-AVVVGLTLYNGSVIAEIIRAGILSLPKGQTEAAS 177

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               R S+              +   +   +  L   AL YQ+ +
Sbjct: 178 ALGMRKSQMMRLILLPQAITTMLPALVSQMVVALKDSALGYQIGY 222


>gi|295680984|ref|YP_003609558.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295440879|gb|ADG20047.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 237

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 90/231 (38%), Gaps = 8/231 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  +F +    +   + +       V  FVL + L++     +R+ H         
Sbjct: 6   RQYWQNYIFTDGFNYTGLVIRLWLLVASIVLGFVLAVPLAIARASRNRYIHGPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++ T++  G P  V + L Y   +    +  +  +  S          +A +    A+ 
Sbjct: 60  -WLFTYVFRGTPLYVQLLLIYTGLYSLHFVHSYAMLD-SFFRNAMNCTLLAFALNECAYA 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    +     G++EAA A G++  K    ++LP A+R  +P  +++ + +L  ++LA
Sbjct: 118 TEIFAGAIRETSHGEIEAAQAYGMSKFKLYTRIILPSALRRALPSYSNEVILMLHATTLA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 D++ V   + + T    +   I   +Y ++   +     ++  ++
Sbjct: 178 FTATVPDILKVARDVNSATYATFQAYGIAAILYAAIVFALIWGFRKMEIRL 228



 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 39/104 (37%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V   WL  + ++   ++   +   R S N+ +     ++  VFR  P  V +  +Y  
Sbjct: 22  GLVIRLWLLVASIVLGFVLAVPLAIARASRNRYIHGPVWLFTYVFRGTPLYVQLLLIYTG 81

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           + S+  +  ++++  F     N  L    L     A       +
Sbjct: 82  LYSLHFVHSYAMLDSFFRNAMNCTLLAFALNECAYATEIFAGAI 125


>gi|262278401|ref|ZP_06056186.1| ABC-type arginine/histidine transport system protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262258752|gb|EEY77485.1| ABC-type arginine/histidine transport system protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 237

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 86/220 (39%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G VL++    L+R       +    LY  T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFVLAVPL-SLARVSENLWFRGPVWLY--TYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + +   +  +          +  +  T A+  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYIHEHQTLD-AFFREGINCTILVFALNTGAYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFNAFGIAAVLYAMLAFILIWLFRKLEKR 227


>gi|229592161|ref|YP_002874280.1| putative histidine transporter permease [Pseudomonas fluorescens
           SBW25]
 gi|229364027|emb|CAY51589.1| putative histidine transport system permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 232

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESVLWPLLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKLAERR 222


>gi|37525273|ref|NP_928617.1| glutamate/aspartate transport system permease protein GltJ
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36784700|emb|CAE13600.1| Glutamate/aspartate transport system permease protein GltJ
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 246

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++      L R    K    +
Sbjct: 6   NWGIFLQAAPFGNTTYLGWLIAGFQVTIALSICAWIIAFIVGSLFGIL-RTVPNKILSGI 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
              Y+  F    +P +V   + Y  +    P      F      + +F +S    L  +T
Sbjct: 65  GTCYVELF--RNVPLIVQFFIWYLVVPELLPEKIGLWFKTELDPNIQFFLSSTACLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+TS+ +NL+KN
Sbjct: 123 AARMCEQVRAAIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++++I L M+ L  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYIGINLVIMLAMHLLEKKVRL 239



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   ++ GF  T  L+    I A I+G+L G 
Sbjct: 3   IDWNWGIFLQAAPFG----------NTTYLGWLIAGFQVTIALSICAWIIAFIVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   NK+++ I   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNKILSGIGTCYVELFRNVPLIVQFFIWYLVVPELLPEKIGLW 99


>gi|16079987|ref|NP_390813.1| sulfur-containing amino acid ABC transporter permease [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221310879|ref|ZP_03592726.1| hypothetical protein Bsubs1_16021 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315204|ref|ZP_03597009.1| hypothetical protein BsubsN3_15917 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320122|ref|ZP_03601416.1| hypothetical protein BsubsJ_15833 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324404|ref|ZP_03605698.1| hypothetical protein BsubsS_15992 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|7674451|sp|O34931|TCYM_BACSU RecName: Full=L-cystine transport system permease protein tcyM
 gi|2293250|gb|AAC00328.1| transporter [Bacillus subtilis]
 gi|2635400|emb|CAB14895.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 235

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 3/231 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +     T+     + V   V G +++L    + R F  K   A    Y+
Sbjct: 1   MQFDFPFIVSAMKEMVKTIPLTLMMAVLPIVFGFLVAL-GNIIVRIFRIKGLVACSRFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAE 283
           S F       L ++ +   +      +  F  +G S    P  M + +ALS    A++ E
Sbjct: 60  SFFRSTPA-ILHIMLIYLGIPPVADQVSSFFHLGWSANEIPVSMFVIMALSLTAGAYLTE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSG++A+  GQ+EAA ++GLT+ +  R V+LPQA++  IP  T+  +  L  +S+A  
Sbjct: 119 IIRSGILAMDTGQVEAAYSIGLTYSQTFRRVILPQALKVSIPNFTNLGIGFLHTTSIAAI 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           V   ++      + +     +E  +    IY  L++++      L  K A 
Sbjct: 179 VAVPEITGTATIVASDNYAFLEAFIGAAIIYWVLTLILESANGVLERKAAR 229


>gi|325567192|ref|ZP_08143859.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158625|gb|EGC70771.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 214

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  + + +  + +S   +T+   A   + S  LGI+ +       R           ++ 
Sbjct: 1   MFEYLVNVMPQLISGTGITVKLFALTLIGSIPLGILFAFVLASRLRILKL-------IVQ 53

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +L+ G P L+ +   +   +  P+L          V   F +  IA     AA+ AE
Sbjct: 54  VYVWLMRGTPLLLQLIFVF---YGLPIL--------GIVFDRFEAALIAFIINYAAYFAE 102

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+ ++P GQ EAA  L L+  +  + +++PQ ++  +P + ++ +NL+K++SL   
Sbjct: 103 IFRGGIQSIPAGQYEAAKVLRLSPIQTIQKIIIPQVVKITLPSVGNEVINLVKDTSLVYI 162

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G +D++ +G   + +    +  ++    IYL ++ +  L + ++  K+    
Sbjct: 163 LGLSDVMRIGKIAMERD-STLLPLVGVGLIYLVMTGVFTLLLKQIETKLDYYR 214



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L    +I +  +G L      S  +++  I +VYV + R  P L+ + F+
Sbjct: 12  LISGTGITVKLFALTLIGSIPLGILFAFVLASRLRILKLIVQVYVWLMRGTPLLLQLIFV 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  + D          +N              + 
Sbjct: 72  FYGLPILGIVFDRFEAALIAFIINYAAYFAEIFRGGIQSI 111


>gi|238755069|ref|ZP_04616417.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia ruckeri ATCC 29473]
 gi|238706773|gb|EEP99142.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia ruckeri ATCC 29473]
          Length = 246

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYLGWIWSGFQVTVALSLCAWVIAFFIGSLFGILRTVPNRFLAAM 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   +      +     QF           F+S
Sbjct: 65  GTCYVELFRNVPLIVQFFTWYLVVPELLPTNIGMWFKTELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMLCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVLINAVIMLIMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  IG+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIWSGFQVTVALSLCAWVIAFFIGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ +A +   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNRFLAAMGTCYVELFRNVPLIVQFFTWYLVVPELLPTNIGMW 99


>gi|330823279|ref|YP_004386582.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|329308651|gb|AEB83066.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 250

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 10/225 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   +   L +          + + +  + +V+      L           L   ++  
Sbjct: 22  FGKGGDITYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDSPWVVRLGNAWVEF 81

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV I L Y                     P F+ +  AL  +T+A IAE VR
Sbjct: 82  F--RNIPLLVHIFLWY--------HVIPAIFPAMKSLPGFVLVVFALGFFTSARIAEQVR 131

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ A+PRGQ  A +A+G T  +  R VLLP A R IIPPLTS+ +N+ KNSS+A AV  
Sbjct: 132 SGIQALPRGQRYAGMAMGFTTVQYYRYVLLPMAFRIIIPPLTSETMNIFKNSSVAFAVSV 191

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L      +  +T + IE+ L+   +Y+  ++ I   M  +  +
Sbjct: 192 SELTMYAMQVQEETSRGIEVYLLVTALYVVSALAINRIMAFIEKR 236



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEVFRNIPPL 142
           +Y   +L  +  T  ++   +  A ++G+L+G  R    +  V  +   +VE FRNIP L
Sbjct: 29  TYLDWLLSAWGWTVSVSLLALAIALVVGSLIGTLRTLPDSPWVVRLGNAWVEFFRNIPLL 88

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           V IF  Y  + ++ P           +F
Sbjct: 89  VHIFLWYHVIPAIFPAMKSLPGFVLVVF 116


>gi|312970728|ref|ZP_07784909.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1827-70]
 gi|310337377|gb|EFQ02515.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1827-70]
          Length = 224

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVSW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++  GQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISLGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD      TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   V+W  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|188534470|ref|YP_001908267.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis
           Et1/99]
 gi|188029512|emb|CAO97389.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis
           Et1/99]
          Length = 245

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   +V +  +G +  +  T   R     
Sbjct: 5   WNWGIFLQEAPFGNTTYLGWLWSGFQVTIAVSVCAWVIALCVGSLFGILRTVPGRLLSSL 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   +      +     QF           F  
Sbjct: 65  GACYVELFRNVPLIVQFFIWYLVVPELLPENIGMWFKSEIDPNIQF-----------FTC 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLLMGLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   +  GF  T  ++    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTTYLGWLWSGFQVTIAVSVCAWVIALCVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R    +L++ +   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPGRLLSSLGACYVELFRNVPLIVQFFIWYLVVPELLPENIGMW 99


>gi|149201683|ref|ZP_01878657.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035]
 gi|149144731|gb|EDM32760.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Roseovarius sp. TM1035]
          Length = 216

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 11/217 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +      +     +   + V  +VLS     + R         L +++IS F   G P L
Sbjct: 5   MPVILSYVPLTLAMASVAMVCALVLSALL-AVERVVRVPILDWLVIVFISFF--RGTPLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   +  P +     +   T      +  + L  + AA++AE +R+ +I+V R 
Sbjct: 62  VQLFLFY---YGLPQV-----LSVLTRIDGVTAAILGLMLHFAAYMAESIRAAIISVDRS 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  ++G+T  +  + ++LPQA R   P L + ++++LK +SLA  +G  +++     
Sbjct: 114 QWEAGQSIGMTQWQLMQRIILPQAARVAAPTLVNYFIDMLKATSLAFTLGVTEMMGAAQK 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               +    E  L+   IY  +   +      L   +
Sbjct: 174 EAAGSFLYFEAFLVVAVIYWGMVEALNQGQKVLETYL 210



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 37/96 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A   M+ A ++  L+   R+    ++ W+  V++  FR  P LV +F  Y  +  V
Sbjct: 15  TLAMASVAMVCALVLSALLAVERVVRVPILDWLVIVFISFFRGTPLLVQLFLFYYGLPQV 74

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           L +      +   +       +         A I V
Sbjct: 75  LSVLTRIDGVTAAILGLMLHFAAYMAESIRAAIISV 110


>gi|292487614|ref|YP_003530486.1| putative glutamate/aspartate ABC transporter inner membrane protein
           [Erwinia amylovora CFBP1430]
 gi|292898853|ref|YP_003538222.1| glutamate/aspartate ABC transporter permease [Erwinia amylovora
           ATCC 49946]
 gi|291198701|emb|CBJ45810.1| glutamate/aspartate ABC transporter, permease protein [Erwinia
           amylovora ATCC 49946]
 gi|291553033|emb|CBA20078.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia amylovora CFBP1430]
 gi|312171721|emb|CBX79979.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 245

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L          +   ++ +  +G    +  T   R F   
Sbjct: 5   WNWGIFLQEAPFGNTSYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGILRTVPGRLFSSL 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+  A+      +     QF           F  
Sbjct: 65  GTCYVELFRNVPLIVQFFIWYLVVPELLPEAIGTWFKSEIDPNIQF-----------FTC 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SVLCLGLFTAARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVAINAVIMLLMGLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           ++SY   +  GF  T  ++    I A  +G+  G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTSYLGWLWSGFQVTIAVSVCAWIIALCVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R    +L + +   YVE+FRN+P +V  F  Y  V  +LP    + 
Sbjct: 53  LRTVPGRLFSSLGTCYVELFRNVPLIVQFFIWYLVVPELLPEAIGTW 99


>gi|260461491|ref|ZP_05809738.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259032561|gb|EEW33825.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 221

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 13/224 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +  + ++ V S  +G+V+ L           +  +A+   Y+       L
Sbjct: 11  WRHFDKLWGGLLLSLELAVISIAIGVVIGLVLAVWY-VSAGRVVRAVIAAYVEFIRNVPL 69

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV     Y + +  P +    +           S  + LS Y+ A++ E+ RSGL AV
Sbjct: 70  ILLV-----YLVFYGLPTVVDLAY-------SAPTSFVLTLSVYSGAYLVEVFRSGLEAV 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ++A  A+GLT  +    V LP  +R  +P L++ +++L K++S+A  +   +L   
Sbjct: 118 PRGQLDAGKAIGLTPWQRLLHVRLPTMLRITLPALSNTFISLFKDTSIASVISVPELTYG 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I   T + +E+ L+   +YL     +   +  +  +     
Sbjct: 178 AQWINFNTFRIVEVYLVTTAMYLVTGYALLFALRLVERRFRAAR 221



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 39/79 (49%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     +   +  G + +  LA   +    +IG ++    +SA ++V  +   YVE  
Sbjct: 5   LNFNLIWRHFDKLWGGLLLSLELAVISIAIGVVIGLVLAVWYVSAGRVVRAVIAAYVEFI 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN+P +++++ ++  + +V
Sbjct: 65  RNVPLILLVYLVFYGLPTV 83


>gi|126668365|ref|ZP_01739323.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17]
 gi|126627181|gb|EAZ97820.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Marinobacter sp. ELB17]
          Length = 361

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/252 (20%), Positives = 107/252 (42%), Gaps = 13/252 (5%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +  +  +P    +L  G +     +            I  +  +L  +       L 
Sbjct: 119 WFGIFGLTGLPLIGYILIPGGWFGLEEVQSSRWGGLMLTLILAYVGILAALPIGTILALG 178

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + + +++I  +    L T++ +A           +    F+       + M 
Sbjct: 179 RRSDMPIIRGMCVVFIEVWRAVPLITVLFMA----------SVMLPLFLPDGVNFEKLMR 228

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I ++ + +A++AE+VR GL A+P+GQ EAA ALGL + + T LV+LPQA+  +IP + 
Sbjct: 229 ALIGITLWQSAYMAEVVRGGLQAIPKGQYEAASALGLGYWRKTGLVVLPQALTLVIPGIV 288

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSLSIMIALFM 385
           + +++L K+++L + +G  D++    + I          E  +   F +      ++ + 
Sbjct: 289 NTFISLFKDTTLVLIIGLFDILGAVQSTITDPAWRNVTTEGYVFVAFCFWIFCFGMSRYS 348

Query: 386 NRLNAKIALKEK 397
             L  K+    K
Sbjct: 349 QNLERKLDTGHK 360



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 40/75 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA+ G++ A  IGT++  GR S   ++  +C V++EV+R +P + V+F     
Sbjct: 153 GLMLTLILAYVGILAALPIGTILALGRRSDMPIIRGMCVVFIEVWRAVPLITVLFMASVM 212

Query: 152 VLSVLPIPDHSIVLP 166
           +   LP   +   L 
Sbjct: 213 LPLFLPDGVNFEKLM 227


>gi|253990627|ref|YP_003041983.1| glutamate/aspartate transport system permease protein gltj
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782077|emb|CAQ85241.1| glutamate/aspartate transport system permease protein gltj
           [Photorhabdus asymbiotica]
          Length = 246

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  +       L R    K    +
Sbjct: 6   NWGIFLQAAPFGNTTYLGWLIAGFQVTIALSICAWIIAFIAGSLFGIL-RTVPNKILSGI 64

Query: 220 PLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              Y+  F    +P +V   + Y +        +  +           F+S  + L  +T
Sbjct: 65  GTCYVELF--RNVPLIVQFFIWYLVVPELLPEKISLWFKTELDPNIQFFISSTVCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+TS+ +NL+KN
Sbjct: 123 AARMCEQVRAAIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRIIIPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y++++++I L M+ L  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAYETFTAITLAYITINLVIMLAMHLLEKKVRL 239



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   ++ GF  T  L+    I A I G+L G 
Sbjct: 3   IDWNWGIFLQAAPFG----------NTTYLGWLIAGFQVTIALSICAWIIAFIAGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   NK+++ I   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNKILSGIGTCYVELFRNVPLIVQFFIWYLVVPELLPEKISLW 99


>gi|239944756|ref|ZP_04696693.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239991221|ref|ZP_04711885.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291448218|ref|ZP_06587608.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
 gi|291351165|gb|EFE78069.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
          Length = 313

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 23/257 (8%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + I  L    +  L    H     + +F            +    K F  + V  +VL +
Sbjct: 27  LAIVALIVVSILRLADKGHLAPEMWDIFNYAGIRQNIADAVLATLKAFGLAAVGSLVLGV 86

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R    K  + +   +I  F      +L L+   Y +              G   
Sbjct: 87  LL-AVGRLSDHKPIRWVATTFIELFR-----SLPLLITIYAIWV------------GFLT 128

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +L   LS Y     AE++R+G+ +VP+GQ EAA ALG++  +    VL+PQA+RS
Sbjct: 129 DYSMWALAAGLSVYNGCVQAEVLRAGINSVPKGQSEAAYALGMSKTQVMTTVLMPQAIRS 188

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSL 377
           ++P + SQ +  LK++SL   + + +L+     I + T        +  I++   IY+++
Sbjct: 189 MLPTIISQLVVTLKDTSLGFIILYPELLQTARLIASNTQVNGQYPYVSTIVVIGTIYIAM 248

Query: 378 SIMIALFMNRLNAKIAL 394
            ++++     +  +   
Sbjct: 249 CLLLSALATWIEKRGRR 265



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 34/61 (55%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            + T        + + ++G L+  GRLS +K + W+   ++E+FR++P L+ I+ ++   
Sbjct: 67  VLATLKAFGLAAVGSLVLGVLLAVGRLSDHKPIRWVATTFIELFRSLPLLITIYAIWVGF 126

Query: 153 L 153
           L
Sbjct: 127 L 127


>gi|167581196|ref|ZP_02374070.1| histidine transport system permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 237

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 91/224 (40%), Gaps = 8/224 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            ++ + + +S   +T+        F FV  + L++     +R              + T+
Sbjct: 12  FLYWDGQRMSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPV-------RVYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +    +    F+  +          +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLLIYTGMYSLAFVRDHAFLD-TFFRSGMNCAILAFALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+  G++EAA A G++     R V+LP ++R  +P  +++ + +L  +++A      
Sbjct: 124 AIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ V     + T  A +   I   IYL++S  +     R    
Sbjct: 184 DILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    +    +   R+S N+ ++   RVY  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPVRVYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
             + S+  + DH+ +  F     N  +    L             +  I 
Sbjct: 80  TGMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEIFAGAIRAIA 129


>gi|167550404|ref|ZP_02344161.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205324499|gb|EDZ12338.1| arginine ABC transporter, permease protein ArtM [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 222

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S  + +VL+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTII---LTLKTPFVVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPLLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG+  +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCGALGMGKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVV-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +  A ++  +           V W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|161504173|ref|YP_001571285.1| hypothetical protein SARI_02280 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865520|gb|ABX22143.1| hypothetical protein SARI_02280 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 224

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        + +    +    KI V + V+GIV       +      +     P+ +
Sbjct: 1   MYDFDWSSIIPSMPYLLAGLVITLKITVTAVVVGIVWGTILAVM------RLSSFTPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ RL++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMRLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFTPIAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|153855979|ref|ZP_01996920.1| hypothetical protein DORLON_02945 [Dorea longicatena DSM 13814]
 gi|149751779|gb|EDM61710.1| hypothetical protein DORLON_02945 [Dorea longicatena DSM 13814]
          Length = 220

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 6/203 (2%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP-TLVLIALKYQLHFDKPV 250
            +F L +  ++FA  +           +P+LY  T +   +     ++A  Y  ++   +
Sbjct: 20  ITFELTVAATIFALIVGVIIAIIGYYKIPVLYQLTRVYVSIMRGTPVVAQLYFFYYGIAL 79

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
              F            +++ + +S    AF++E +R  L++V  GQ EAA +LG+T+ + 
Sbjct: 80  YSAF-----VRNMTPLIAVAVVMSFNMGAFMSESIRGALLSVDEGQKEAAYSLGMTNFQL 134

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              +++PQA+R  +PPL +  +NL+K +SLA  +G  D++        +T +  EI    
Sbjct: 135 VTRIVIPQAVRVALPPLFNDIINLIKMTSLAFMLGVPDIMGAAKIEGARTFRYFEIYAAV 194

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
           M +Y  +  ++ +    L  K A
Sbjct: 195 MLVYWLIIFVLGILHKLLEKKCA 217


>gi|108797843|ref|YP_638040.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|108768262|gb|ABG06984.1| amino acid ABC transporter membrane protein, PAAT family / amino
           acid ABC transporter ATP-binding protein, PAAT family
           [Mycobacterium sp. MCS]
          Length = 532

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L           +I + S ++     L    L+     +       + +  +++
Sbjct: 4   FWYYFTLPELIDGGLLALRIALLSLIIAWPAGLL---LALISDSRWFLPRLAVGVYIWVL 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +   Y       VL Q+ +   S  +        A +        EI R GL
Sbjct: 61  RGTPILLQLIFLYN------VLPQWGWQLSSETTAVLGLALNAAAFAA-----EIFRGGL 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV   Q++AA ++GL+       + LPQA+R I P L S+ +  +KN+SLA A+  A+L
Sbjct: 110 NAVNVSQIDAARSIGLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLASAIAVAEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 +++   + + +      IYL+L+ ++ +       ++    ++
Sbjct: 170 TLRSQQLVSINFEYLPVFGAAAAIYLALNTILMVVQYLSERRLDNDRQR 218



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G +    +A   +I A   G L+     S   L      VY+ V R  P L+ + FL
Sbjct: 13  LIDGGLLALRIALLSLIIAWPAGLLLALISDSRWFLPRLAVGVYIWVLRGTPILLQLIFL 72

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 73  YNVLPQW 79


>gi|62179450|ref|YP_215867.1| arginine transporter permease subunit ArtM [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|62127083|gb|AAX64786.1| ABC superfamily (membrane), arginine 3rd transport system
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
          Length = 222

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S  + +VL+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTII---LTLKTPFVVWLVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPLLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQCQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 179 LLYGRTYDVV-VFGAAGVIYLVVNGLLTLMMRLIERKALAFERR 221



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +  A ++  +           V W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIAVALVLALVFTIILTLKTPFVVWLVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|170693092|ref|ZP_02884253.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia graminis C4D1M]
 gi|170142090|gb|EDT10257.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia graminis C4D1M]
          Length = 219

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 8/196 (4%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F+  I  ++           +      +     F++  + +  L+   Y L +  PV   
Sbjct: 26  FITLIGFAIALVLGLVLAVLRRSPVKAVSRTVGFIVEFIRSTPLLIQVYVLFYVLPVY-- 83

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                         +  + ++ + A + +E+ R+GL  V RGQ EAA AL L+  +    
Sbjct: 84  ------GITMSALTAGTVGIALHYACYTSEVYRAGLNGVARGQWEAACALSLSPWRTYSG 137

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA+R +IP L +  + + K++ +  A+   +L+     I ++T + +E I +    
Sbjct: 138 VILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNIGSETFRYLEPITLAGIF 197

Query: 374 YLSLSIMIALFMNRLN 389
           +L +SI  A  + RL 
Sbjct: 198 FLLISITFAQLVRRLE 213


>gi|331085656|ref|ZP_08334739.1| hypothetical protein HMPREF0987_01042 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406579|gb|EGG86084.1| hypothetical protein HMPREF0987_01042 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 215

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 12/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L   T        IF  + +  + L L      R    K    +  +YIS  ++ G P 
Sbjct: 6   MLRQMTAGFGQTCLIFGMTLIFSLPLGLLVY-FGRVSRIKLISWIVKIYIS--VMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ + + Y   F    L Q N  G      +  ++ +  S   AA+ AEI RSG+ ++P+
Sbjct: 63  MLQLLVWY---FAPYYLWQMNIGGY-----KLTAILLGCSLNYAAYFAEIYRSGIESIPK 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG + ++    ++LPQ +++++P +T++ + L+K++SL  ++ + ++ +V  
Sbjct: 115 GQYEAAALLGYSRQQTFLRIVLPQMVKNVLPSVTNEVITLVKDTSLVYSLSYIEMFAVAK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I       +    I    Y   +  +A  M     K+    
Sbjct: 175 QIAAA-QTTVVPFFIAGVFYYIFNYAVAWGMELFEKKLNYYR 215



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 36/73 (49%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  GF  T  +    +I +  +G LV  GR+S  KL++WI ++Y+ V R  P ++ +
Sbjct: 7   LRQMTAGFGQTCLIFGMTLIFSLPLGLLVYFGRVSRIKLISWIVKIYISVMRGTPLMLQL 66

Query: 146 FFLYKSVLSVLPI 158
              Y +   +  +
Sbjct: 67  LVWYFAPYYLWQM 79


>gi|310814815|ref|YP_003962779.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753550|gb|ADO41479.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 226

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 102/236 (43%), Gaps = 15/236 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                    ++ V + + G+V+ +    ++R       +++  +
Sbjct: 1   MSYQFNFAALVPYWPDFISGAWVTLQLTVGAVIFGMVIGVL-CAIARRSRFVALRSVAGV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+ T  +   P +V I   +           F         P  ++   AL     A+ A
Sbjct: 60  YVET--VRNTPFIVQIFFLF-----------FGMSSVGVRMPIMVAAIFALVVNVGAYTA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A+P+GQ+EAA ALGL+  +  R ++L  A+  + P LTSQ++ ++  +S+  
Sbjct: 107 EIIRAGMDAIPKGQIEAAEALGLSQFQIYRDIILMPAIEKVYPALTSQFVLMMLTTSICS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +L  V   I + T ++ E  ++    Y+ +++M+      L    A   ++
Sbjct: 167 QISAEELTGVANNIQSNTFRSFETYIVIGLFYIGITLMMRFGF-WLIGLYAFPRRR 221



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 41/105 (39%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    + G   T  L    +I   +IG L    R S    +  +  VYVE  RN P +V
Sbjct: 12  PYWPDFISGAWVTLQLTVGAVIFGMVIGVLCAIARRSRFVALRSVAGVYVETVRNTPFIV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            IFFL+  + SV       +   F + +N    +   +    +A 
Sbjct: 72  QIFFLFFGMSSVGVRMPIMVAAIFALVVNVGAYTAEIIRAGMDAI 116


>gi|167922530|ref|ZP_02509621.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei BCC215]
          Length = 229

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +   ++   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTIETVKLAVLSLAASLVLGLAGAA-AKLSSNRALASVGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQVLLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++  Q MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  L +  L  + +   ++
Sbjct: 188 TLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRR 226


>gi|160903091|ref|YP_001568672.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga
           mobilis SJ95]
 gi|160360735|gb|ABX32349.1| polar amino acid ABC transporter, inner membrane subunit [Petrotoga
           mobilis SJ95]
          Length = 213

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 105/220 (47%), Gaps = 18/220 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +    +T+       V  F LG++L++  T  ++ F+  +       Y+   +I G P 
Sbjct: 1   MVEGIWVTLFLTLISIVIGFFLGVLLAVSKTYGNKLFYYIS-------YVFIEIIRGTPL 53

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + + Y            +           ++  +A S  +AA+ AE +R  + ++  
Sbjct: 54  LVQLFILYY-----------SLPVIGIRLSPILASIMAFSLNSAAYQAEYLRGAIQSISS 102

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQM+AA+++G+   +A RL++LPQA+R  IP  T++++ LLK SSL+  VG  ++++   
Sbjct: 103 GQMQAALSIGMKKWQAIRLIILPQALRRFIPSWTNEFIYLLKYSSLSYIVGAPEIMAQAK 162

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + ++  +  ++ L    IY  L  +       +  KI +
Sbjct: 163 FVASRNFEFFQVYLFAAIIYFVLVTIFGEIFRFIEKKIKI 202



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 33/65 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T +L    ++    +G L+   +   NKL  +I  V++E+ R  P LV +F L
Sbjct: 1   MVEGIWVTLFLTLISIVIGFFLGVLLAVSKTYGNKLFYYISYVFIEIIRGTPLLVQLFIL 60

Query: 149 YKSVL 153
           Y S+ 
Sbjct: 61  YYSLP 65


>gi|172064622|ref|YP_001812272.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171998107|gb|ACB69023.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 246

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 84/193 (43%), Gaps = 7/193 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG----STVSP 264
           R    ++      LY  T+ I G P L  + L Y   F +    Q  +  G    S +  
Sbjct: 42  RVSPNRSVHGPVALY--TWFIRGTPLLAQLMLVYY-GFGQFQWVQDAWQRGNPLLSVLRD 98

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F    IAL+  T A+  EI+   + A   G++EAA A G++   A R ++LP A+R  +
Sbjct: 99  PFGCAMIALTVNTCAYTVEILAGAIRATAYGEIEAAQAYGMSRATAWRRIVLPSALRRFL 158

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++ + +L  +SL  A+   DL      +        E  +    +Y +L+ ++AL 
Sbjct: 159 PAYSNEVILMLHGTSLVSAITLIDLTGAARDVYANYYAPFEAFISVGTVYFALTGLVALA 218

Query: 385 MNRLNAKIALKEK 397
           +     +  +  +
Sbjct: 219 IRAAERRFLVHLR 231


>gi|116491604|ref|YP_811148.1| ABC-type amino acid transport system, permease component
           [Oenococcus oeni PSU-1]
 gi|290891211|ref|ZP_06554273.1| hypothetical protein AWRIB429_1663 [Oenococcus oeni AWRIB429]
 gi|116092329|gb|ABJ57483.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Oenococcus oeni PSU-1]
 gi|290479175|gb|EFD87837.1| hypothetical protein AWRIB429_1663 [Oenococcus oeni AWRIB429]
          Length = 214

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 19/221 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +  L     T+ ++    + S VLG + ++     S     KT   +   YI  F    L
Sbjct: 10  HSFLVAFGYTLLSSIIALIASTVLGTLFAILQIVPS-----KTANVIARAYIEVFRNIPL 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +V+                +  +        F +  I L+ YT+AFIAE VR+G+ +V
Sbjct: 65  LIIVMFF--------------YLVVTKIVKIGGFTAGTIGLTLYTSAFIAETVRAGINSV 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ E A A GL+  +  R+++LPQA +  IP L +Q++NL+KNSS+   V   DL+  
Sbjct: 111 GIGQTEGARANGLSSWQTLRIIILPQAFKIAIPSLGNQFINLVKNSSILAFVAGGDLMYT 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +   T  +    +I    YL +++ +  +M  L  K+ 
Sbjct: 171 ANNVAATTFDSFNSYIIVGIFYLIITLPLNYYMKFLETKLK 211



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 37/67 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            LV F  T   +   +I +T++GTL    ++  +K    I R Y+EVFRNIP L+++ F 
Sbjct: 12  FLVAFGYTLLSSIIALIASTVLGTLFAILQIVPSKTANVIARAYIEVFRNIPLLIIVMFF 71

Query: 149 YKSVLSV 155
           Y  V  +
Sbjct: 72  YLVVTKI 78


>gi|238762871|ref|ZP_04623839.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia kristensenii ATCC 33638]
 gi|238698882|gb|EEP91631.1| Glutamate/aspartate transport system permease protein gltJ
           [Yersinia kristensenii ATCC 33638]
          Length = 246

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   +V +F +G +  +  T  +R     
Sbjct: 5   WNWGIFLQPAPFGNTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGILRTVPNRILSTI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GATYVELFRNVPLIVQFFTWYLVVPELLPANLGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+G+ ++PRGQ  A +A+GLT  +  R VLLP A R IIPP+T
Sbjct: 114 SMMCLGLFTAARVCEQVRAGIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIIPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLGYVLINAVIMLLMRLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 EKKVQL 239



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+    + A  +G+L G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYFGWIWSGFQVTVALSLCAWVIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N++++ I   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNRILSTIGATYVELFRNVPLIVQFFTWYLVVPELLPANLGMW 99


>gi|241113570|ref|YP_002973405.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861778|gb|ACS59444.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M + +  L+          ++ +    L +V++  A  L R       +AL   YI  F 
Sbjct: 1   MSVWSGYLTLILEGALVTLELTIMGSALALVMAFLAG-LGRLSRFFAVRALATAYIEFF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   + ++F  P         G T++P   +  +AL     A+ AE+VR  
Sbjct: 59  -RGTSIFVQL---FWVYFVLP-------FAGLTLTP-LQAGVLALGLNVGAYAAEVVRGA 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV R Q EA IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D
Sbjct: 107 VKAVGREQSEACIALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +      +  QTG  +      + +Y  ++  I+  M  L  ++A  
Sbjct: 167 MTFQAQVVRAQTGNTLVPFATILILYFLMASAISATMRWLERRMARS 213



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 3/142 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL G + T  L   G   A ++  L G GRLS    V  +   Y+E FR     V 
Sbjct: 7   YLTLILEGALVTLELTIMGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F++Y  +                + LN    +   +     A     S      ++L  
Sbjct: 67  LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYAAEVVRGAVKAVGREQSEAC---IALNL 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
           +R  R  H    +ALPL+  + 
Sbjct: 124 SRYQRMRHVILPQALPLMLPTF 145


>gi|41704|emb|CAA68510.1| M protein (147AA) [Escherichia coli]
          Length = 147

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 62/133 (46%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            +          +AL+  T A+  EI    + +VP G++EAA A G +  K  R ++LP 
Sbjct: 4   NAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYGFSTFKMYRCIILPS 63

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  +P  +++ + +L +++LA      DL+ +   I   T Q      I   +YL +S
Sbjct: 64  ALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIIS 123

Query: 379 IMIALFMNRLNAK 391
            ++     R   +
Sbjct: 124 YVLISLFRRAEKR 136


>gi|119025521|ref|YP_909366.1| permease protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154486959|ref|ZP_02028366.1| hypothetical protein BIFADO_00796 [Bifidobacterium adolescentis
           L2-32]
 gi|118765105|dbj|BAF39284.1| permease protein of ABC transporter system [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154084822|gb|EDN83867.1| hypothetical protein BIFADO_00796 [Bifidobacterium adolescentis
           L2-32]
          Length = 218

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 14/232 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F     +    F     +    I VF  +L IV+ L              + +  +YI 
Sbjct: 1   MFDWTFISHYAPFFVSGAEMTLFISVFGIILAIVVGLV-CAGIEIARIPVLRQVVRVYIE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L    P LV +   Y L+F  P L          V    +   + L     +++AE +
Sbjct: 60  --LSRNTPLLVQL---YFLYFGLPKL--------GLVWSAELCAIVGLGFLGGSYMAEAM 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL  +P  Q E+A  LGL+  +    V++PQA+ + IP + +  + L+K SS+  A+ 
Sbjct: 107 RGGLETIPEVQRESAYVLGLSKWQTLSRVVIPQAISTSIPGVVANVIFLIKESSVVSAIA 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            AD++ +   +I       E + + +  YL + + I+LF   L  +   + +
Sbjct: 167 LADVMYMAKDLIGMYYDTYESLFLLIVAYLVILLPISLFGTWLERRFDYERR 218



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 42/78 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T  S YA   + G   T +++  G+I A ++G +     ++   ++  + RVY+E+ R
Sbjct: 3   DWTFISHYAPFFVSGAEMTLFISVFGIILAIVVGLVCAGIEIARIPVLRQVVRVYIELSR 62

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV ++FLY  +  +
Sbjct: 63  NTPLLVQLYFLYFGLPKL 80


>gi|308067187|ref|YP_003868792.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
 gi|305856466|gb|ADM68254.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
          Length = 216

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 19/220 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    LT++      VFSF LGI+  +              +   +  ++ F+I  +
Sbjct: 13  RFILEGFLLTLEVAIYSIVFSFALGILFGILRY----------TRLPVISQVAAFIIDLI 62

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + + +    P +G    I          +    LS +  A IAEIVRSGL +V
Sbjct: 63  RNLPLLLIIFFIGMVLPSIGISISIK--------WAAITGLSIFEGAMIAEIVRSGLNSV 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ+EAA + GL++ +    ++LPQA+R ++PP+ SQ+++L K++SLAV +   +L   
Sbjct: 115 HKGQVEAARSSGLSYSQTLWHIILPQALRRMVPPIVSQFISLFKDTSLAVIISLPELTHN 174

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +  Q     I  +L   F+Y +++  ++L   RL  +
Sbjct: 175 IQIVGGQNQSFVIPALLFAAFLYFAVNYSMSLIARRLEVR 214



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 40/87 (45%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 IL GF+ T  +A   ++ +  +G L G  R +   +++ +    +++ RN+P L
Sbjct: 9   WPNVRFILEGFLLTLEVAIYSIVFSFALGILFGILRYTRLPVISQVAAFIIDLIRNLPLL 68

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++IFF+   + S+            G+
Sbjct: 69  LIIFFIGMVLPSIGISISIKWAAITGL 95


>gi|227894181|ref|ZP_04011986.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
 gi|227864011|gb|EEJ71432.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus ultunensis DSM 16047]
          Length = 168

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 9/174 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL ++  F ++ +    L+     + +  P++          V P + +   A     AA
Sbjct: 1   PLKWVVNFYVWIMRGTPLLLQLIFVFYGLPIVH--------IVFPRYQAALFAFVLNYAA 52

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + AEI R G  ++  GQ EAA  L L   +    +++PQ ++ ++P + ++ +NL+K+SS
Sbjct: 53  YFAEIFRGGFQSIDEGQFEAAKVLRLNRWQTMTKIIIPQVIKIVLPSIGNEVINLVKDSS 112

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   +G  DL+  G   + +    +  +++   IYL L  + A  + +L    +
Sbjct: 113 LVYVIGLGDLLRAGNVAMARD-VTLVPLVLVGVIYLILISVCAFILKKLEGHFS 165


>gi|167564741|ref|ZP_02357657.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia oklahomensis EO147]
 gi|167574721|ref|ZP_02367595.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia oklahomensis C6786]
          Length = 240

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G V        ++    ++ + L  LY + F       LV+    +  
Sbjct: 24  MTVALTLAALAVGAVFGALVAA-AKLSRHRSARLLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G
Sbjct: 82  STLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +  R   R +L+PQ +R  +P + + +   LK+S+L    G A+L+       N T Q  
Sbjct: 142 MPARMVLRRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +     NR+ A +    ++
Sbjct: 202 VFFVAGGALYLLMTGLSNRVFNRVEAHVGRSFRR 235



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 40/95 (42%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              + + +L+  + T  L  + +    + G LV A +LS ++    +  +Y  VFR +P 
Sbjct: 11  TDGWGSVLLLAALMTVALTLAALAVGAVFGALVAAAKLSRHRSARLLGDLYTTVFRGVPE 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           L+VI+  Y    +++            + +    +
Sbjct: 71  LLVIYLFYFGGSTLVTTVGQWFGAEGFVGVPPFVI 105


>gi|53722004|ref|YP_110989.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|67639787|ref|ZP_00438621.1| histidine transport system permease protein HisQ [Burkholderia
           mallei GB8 horse 4]
 gi|77358792|ref|YP_338462.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|121597350|ref|YP_989821.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124382545|ref|YP_001024299.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126447794|ref|YP_001078281.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|126456343|ref|YP_001075390.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           pseudomallei 1106a]
 gi|134278817|ref|ZP_01765530.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 305]
 gi|167002834|ref|ZP_02268624.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei PRL-20]
 gi|167723384|ref|ZP_02406620.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei DM98]
 gi|167742355|ref|ZP_02415129.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 14]
 gi|167819526|ref|ZP_02451206.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 91]
 gi|167827899|ref|ZP_02459370.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 9]
 gi|167849366|ref|ZP_02474874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei B7210]
 gi|167906309|ref|ZP_02493514.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei NCTC 13177]
 gi|226197595|ref|ZP_03793170.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pakistan 9]
 gi|237510321|ref|ZP_04523036.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|242311448|ref|ZP_04810465.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106b]
 gi|254174566|ref|ZP_04881228.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|254183461|ref|ZP_04890053.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1655]
 gi|254190089|ref|ZP_04896598.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pasteur 52237]
 gi|254193051|ref|ZP_04899486.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei S13]
 gi|254200693|ref|ZP_04907058.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei FMH]
 gi|254204668|ref|ZP_04911021.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei JHU]
 gi|254264122|ref|ZP_04954987.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1710a]
 gi|254300362|ref|ZP_04967808.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 406e]
 gi|254356910|ref|ZP_04973185.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei 2002721280]
 gi|52212418|emb|CAH38443.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|66967590|gb|AAY59147.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|121225148|gb|ABM48679.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124290565|gb|ABM99834.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126230111|gb|ABN93524.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106a]
 gi|126240648|gb|ABO03760.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|134249236|gb|EBA49317.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 305]
 gi|147748305|gb|EDK55380.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei FMH]
 gi|147754254|gb|EDK61318.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei JHU]
 gi|148025937|gb|EDK84060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei 2002721280]
 gi|157810178|gb|EDO87348.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 406e]
 gi|157937766|gb|EDO93436.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pasteur 52237]
 gi|160695612|gb|EDP85582.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|169649805|gb|EDS82498.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei S13]
 gi|184213994|gb|EDU11037.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1655]
 gi|225930204|gb|EEH26216.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pakistan 9]
 gi|235002526|gb|EEP51950.1| histidine transport system permease protein HisQ [Burkholderia
           pseudomallei MSHR346]
 gi|238520391|gb|EEP83851.1| histidine transport system permease protein HisQ [Burkholderia
           mallei GB8 horse 4]
 gi|242134687|gb|EES21090.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106b]
 gi|243061529|gb|EES43715.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei PRL-20]
 gi|254215124|gb|EET04509.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1710a]
          Length = 229

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +   ++   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTIETVKLAVLSLAASLVLGLAGAA-AKLSSNRALASVGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++  Q MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  L +  L  + +   ++
Sbjct: 188 TLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRR 226


>gi|237797982|ref|ZP_04586443.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020833|gb|EGI00890.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 215

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 90/227 (39%), Gaps = 16/227 (7%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                 +        L       +  F     I L +   R S     +    +  LYI 
Sbjct: 1   MDFTLWDIVRNLLIGLQWTLALSLVAFIGGGLIGLLIMVMRTSEKSGPRV---MAKLYIE 57

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P L+ + L +           F           + +  +AL+ +T+A++AEI 
Sbjct: 58  LF--QGTPLLMQLFLVF-----------FGVALMGLNISPWAAAALALTLFTSAYLAEIW 104

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + ++ +GQ EA+ +L ++  +  R V+LPQA+R  + P     + ++K +++   +G
Sbjct: 105 RGCVESISKGQWEASASLAMSPLEQMRYVILPQALRIAVAPTVGFSVQVVKGTAVTSIIG 164

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           F +L   G  + N T +   +       Y  L   ++L    L  ++
Sbjct: 165 FTELTKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARYLERRL 211



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 36/107 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG L+   R S       + ++Y+E+F+  P L
Sbjct: 6   WDIVRNLLIGLQWTLALSLVAFIGGGLIGLLIMVMRTSEKSGPRVMAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGLNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|210624308|ref|ZP_03294312.1| hypothetical protein CLOHIR_02268 [Clostridium hiranonis DSM 13275]
 gi|210153092|gb|EEA84098.1| hypothetical protein CLOHIR_02268 [Clostridium hiranonis DSM 13275]
          Length = 221

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 11/202 (5%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V SF+  + L++    + R+      K    L+IS F          I   +  ++  P 
Sbjct: 27  VISFIASMALAIVLL-IMRNSKISIFKGFATLFISFFRSTPY-----ITQLFIFYYGLPQ 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L     I         +S  I+++  ++AFI EI+R GL+AV +GQ EAA+++GL   + 
Sbjct: 81  L-----IPSLVNLSAEVSFVISVALNSSAFIVEILRGGLLAVDKGQREAALSIGLNKFQV 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V++PQA  SI+P L + ++  +KN+++A  +G  +++S    +  +    +E  +  
Sbjct: 136 MTQVVIPQAFVSILPSLGNTFVGAVKNTAIAFTIGVVEILSESKILAARGFNYMEAYIAA 195

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             +Y  L + I L  NRL  ++
Sbjct: 196 GIVYWILILAIDLVQNRLEKRV 217


>gi|126433483|ref|YP_001069174.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126233283|gb|ABN96683.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. JLS]
          Length = 533

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L           +I + S ++     L    L+     +       + +  +++
Sbjct: 5   FWHYFTLPELIDGGLLALRIALLSLIIAWPAGLL---LALISDSRWFLPRLAVGVYIWVL 61

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +   Y       VL Q+ +   S  +        A +        EI R GL
Sbjct: 62  RGTPILLQLIFLYN------VLPQWGWQLSSETTAVLGLALNAAAFAA-----EIFRGGL 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV   Q++AA ++GL+       + LPQA+R I P L S+ +  +KN+SLA A+  A+L
Sbjct: 111 NAVNVSQIDAARSIGLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLASAIAVAEL 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 +++   + + +      IYL+L+ ++ +       ++    ++
Sbjct: 171 TLRSQQLVSINFEYLPVFGAAAAIYLALNTILMVVQYLSERRLDNDRQR 219



 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G +    +A   +I A   G L+     S   L      VY+ V R  P L+ + FL
Sbjct: 14  LIDGGLLALRIALLSLIIAWPAGLLLALISDSRWFLPRLAVGVYIWVLRGTPILLQLIFL 73

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 74  YNVLPQW 80


>gi|308067740|ref|YP_003869345.1| Hypothetical amino-acid ABC transporter permease protein
           [Paenibacillus polymyxa E681]
 gi|305857019|gb|ADM68807.1| Hypothetical amino-acid ABC transporter permease protein
           [Paenibacillus polymyxa E681]
          Length = 219

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 8/224 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI-STFLI 229
           ++   +      M   A++ V  F + ++LS+    +     +   K +  L     ++I
Sbjct: 1   MSMEYILRIMKPMLEGAQMTVILFFITLILSIPLGFIVTLLAKSRIKPIAWLMHTYIYVI 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +          PV      IG   V     +  +A     AA+ AEI R G+
Sbjct: 61  RGTPLLLQLLFFCFGLPMLPV------IGEYLVMDRTTAAVLAFVLNYAAYFAEIFRGGM 114

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++ +GQ EA+  LGL+  +    V++PQ +R  +P +T++   L+K+++L  AV   +L
Sbjct: 115 LSIDKGQYEASQVLGLSKSQTLIRVIVPQMVRIALPAVTNEATTLVKDTALLYAVAVPEL 174

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    T +N+   +I   ++   IYL L++++ LF   L  +  
Sbjct: 175 LHFANTAVNRDF-SIVPYVVAAVIYLLLALVLTLFFRALEKRFK 217


>gi|77405794|ref|ZP_00782878.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77408475|ref|ZP_00785213.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77411932|ref|ZP_00788263.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77162029|gb|EAO73009.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77172917|gb|EAO76048.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77175581|gb|EAO78366.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|319745516|gb|EFV97818.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 221

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 14/231 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    F + L  +        +     + +  F+LG ++  F   L +  H +  + L  
Sbjct: 3   NWDAIFNLELAVKAFPSVIQGLPYTIGLSLVGFILGAIVGFFV-ALMKMSHFRLLRYLAN 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           ++IS  L+ G+P +VL+ L Y           F             +  +  +  ++A+I
Sbjct: 62  IHIS--LMRGIPLMVLLFLIY-----------FGLPFIGIQLDAVTASIVGFTMMSSAYI 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+ L+AV  GQ EAA ALGL      R +++PQA R  +P L++  L+++K SSL 
Sbjct: 109 SEIIRAALLAVDHGQWEAARALGLKTPTIYRGIIIPQATRIALPSLSNVLLDMVKGSSLT 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   D+ +    +       +   ++   IY  +  + A+  +    ++
Sbjct: 169 AMITVPDIFNNAKIVGGTYSDYMTAYILVALIYWVICTLYAIIQDWWEKRL 219



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 41/98 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L+  G I   I+G  V   ++S  +L+ ++  +++ + R IP +V++F +Y
Sbjct: 21  IQGLPYTIGLSLVGFILGAIVGFFVALMKMSHFRLLRYLANIHISLMRGIPLMVLLFLIY 80

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             +  +    D       G  + +       +     A
Sbjct: 81  FGLPFIGIQLDAVTASIVGFTMMSSAYISEIIRAALLA 118


>gi|116248749|ref|YP_764590.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253399|emb|CAK11787.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 219

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +     I + + + G +L +F   L+  +     +     Y    +I G 
Sbjct: 10  WIARYVIMNGIGVTVSISLLAILAGSILGVFVG-LALVYGGVVLRLAVRAYTD--IIRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y +              G  + P F +  +AL+ + ++ + EIVR  L A+
Sbjct: 67  PVLVLVLASYYVSAAV----------GLDLGP-FSAGVLALAIFCSSHVGEIVRGALQAI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G A+L+  
Sbjct: 116 PKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 176 TQEIISRNFMSLQFYFLAGGLYFIINYGIEHFGKYVERKTAL 217



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I+ G   T  ++   ++  +I+G  VG   +    ++    R Y ++ R  P LV++  
Sbjct: 15  VIMNGIGVTVSISLLAILAGSILGVFVGLALVYGGVVLRLAVRAYTDIIRGTPVLVLVLA 74

Query: 148 LYKSVLSV 155
            Y    +V
Sbjct: 75  SYYVSAAV 82


>gi|16519953|ref|NP_444073.1| probable amino-acid ABC transporter permease y4tG [Sinorhizobium
           fredii NGR234]
 gi|2501400|sp|P55661|Y4TG_RHISN RecName: Full=Probable amino-acid ABC transporter permease protein
           y4tG
 gi|2182637|gb|AAB91860.1| probable amino-acid ABC transporter permease y4tG [Sinorhizobium
           fredii NGR234]
          Length = 231

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 18/222 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L F + +    L     T+      F  + VLG+V ++     +R           + + 
Sbjct: 14  LAFAISILPMLLMGLITTLQAAFLGFFVACVLGMVFAVLRGMRTRW----------VAWP 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  LI  +    LIA  + L++  P            + P F++  +AL    +A+I+E+
Sbjct: 64  AAVLIEFIRDTPLIAQLFFLYYVLPEY--------GIIFPAFLTGALALGIQYSAYISEV 115

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ AV  GQ EAA +L L   +    V+LPQA+  +IP L +  ++++K+  +   V
Sbjct: 116 YRGGIQAVDHGQREAAKSLDLPPARTFTHVILPQAIPRVIPALGNYLVSIMKDVPVLSVV 175

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
              ++++    I +QT   +  + +   IYL L+I+ +  + 
Sbjct: 176 TIVEMLNAAKIIGDQTFNYLVPLSMVGGIYLILTIVASALVR 217



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    +L+G + T   AF G   A ++G +    R    + VAW   V +E  R+ P + 
Sbjct: 19  SILPMLLMGLITTLQAAFLGFFVACVLGMVFAVLRGMRTRWVAWPAAVLIEFIRDTPLIA 78

Query: 144 VIFFLYKSVLSVLPIPDHS 162
            +FFLY  +     I    
Sbjct: 79  QLFFLYYVLPEYGIIFPAF 97


>gi|154246018|ref|YP_001416976.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154160103|gb|ABS67319.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 219

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 13/190 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R   +   +    LYI  F   G P L+ + L +   F  P+L              +
Sbjct: 40  YARIARKAWLRRAAGLYIELF--QGTPLLMQLFLIF---FGLPLL--------GLDVSPW 86

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            + +++L+ +++AF+AEI R  + ++P+GQ EA+ +L ++  +  R V+LPQ+MR  +PP
Sbjct: 87  AAAFVSLTLWSSAFLAEIWRGCVESIPKGQWEASSSLAMSFVEQLRYVILPQSMRIAVPP 146

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
                + ++K ++L   +GF +L      I N T +   +      IY +L   ++    
Sbjct: 147 TVGFSVQVVKGTALTSIIGFVELSKAATIITNATFEPFTVYGFAALIYFALCWPLSKSSQ 206

Query: 387 RLNAKIALKE 396
            L  K+ +  
Sbjct: 207 ILERKLNVAH 216


>gi|290961303|ref|YP_003492485.1| binding-protein-dependent ABC transporter transmembrane protein
           [Streptomyces scabiei 87.22]
 gi|260650829|emb|CBG73946.1| putative binding-protein-dependent transport system transmembrane
           subunit [Streptomyces scabiei 87.22]
          Length = 305

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 117/254 (46%), Gaps = 13/254 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V++ +  +        +      +      + L    L +       V   VLG+++++
Sbjct: 59  LVLYLVVVNAPGWPRTRETFFSAEYAREALPKVLEGLWLNVRLLLVCGVAVLVLGMLIAV 118

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
             T     F     +AL   Y   F   GLP ++ + +   +    P L     + G TV
Sbjct: 119 ARTLRGPVFF--PVRALAAAYTDFF--RGLPLIINLMI---VVLGVPALR----LQGVTV 167

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P  +    AL+   +A++AE+ R+G+ +V   Q  AA +LGLT+R+A R V+LPQA+R 
Sbjct: 168 DPVLLGGT-ALTLTYSAYVAEVFRAGIESVHPSQRAAARSLGLTNRQALRHVVLPQAVRR 226

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +PPL +  ++L K++ L    G  D V     I+ ++       ++   ++++L+I + 
Sbjct: 227 QVPPLLNDLVSLQKDTGLVSIGGAIDAVRAADIIVGRSLNYTP-YIVAGLVFVALTIPMT 285

Query: 383 LFMNRLNAKIALKE 396
            F + + A++  + 
Sbjct: 286 RFTDWVTARMDRQR 299


>gi|239918033|ref|YP_002957591.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
 gi|239839240|gb|ACS31037.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Micrococcus luteus NCTC
           2665]
          Length = 295

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 115/236 (48%), Gaps = 12/236 (5%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
              +    G    N  L     T+ +     V S V G+V         R       + L
Sbjct: 51  RRWLAAVDGDAWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFL-----RLAPVGPVRWL 105

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             + +  F    +P LV++   YQL       G      G      + ++  AL+ Y  +
Sbjct: 106 AAVVVEFF--RAVPVLVMMVFFYQLFAQVARSGAIQPQDG-----PYYAVIAALTLYNGS 158

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            IAE+VRSG+ ++PRGQ EAA A+G+T  ++ RLV +PQA+ +++P L SQ++ +LK+S+
Sbjct: 159 VIAELVRSGVRSLPRGQREAAAAVGMTSTQSLRLVEVPQALIAMLPSLLSQFVVILKDSA 218

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +GF +L+     + +  G  ++ +++   I++ ++ ++     RL+ +++ +
Sbjct: 219 LGYLIGFFELLHYARQLGSGNGNILQSLVVAAMIFIVINFLLTWAATRLSRRLSSR 274



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 36/83 (43%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +  +      ++    L G   T   A   ++ + + G + G  RL+    V W+  V 
Sbjct: 50  GRRWLAAVDGDAWRNYYLPGLQFTLQSAGIAVVSSVVFGLVFGFLRLAPVGPVRWLAAVV 109

Query: 133 VEVFRNIPPLVVIFFLYKSVLSV 155
           VE FR +P LV++ F Y+    V
Sbjct: 110 VEFFRAVPVLVMMVFFYQLFAQV 132


>gi|28377716|ref|NP_784608.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254555901|ref|YP_003062318.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300767695|ref|ZP_07077605.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308179878|ref|YP_003924006.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270549|emb|CAD63453.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254044828|gb|ACT61621.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300494680|gb|EFK29838.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308045369|gb|ADN97912.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 217

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 113/234 (48%), Gaps = 19/234 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T++ +    + SF++G VL +      ++     G    
Sbjct: 2   QNFIQAYSWINIRFLLEGLWVTVEVSVVSIIASFIIGSVLGVLRYVKIKYLSAVVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F++  +  L LI + +  +F  P L    F  G        +  +A++ + +A 
Sbjct: 58  ------FVVDIIRNLPLILIIFFTYFGLPHL---GFKPGIIF-----AAILAMTIFESAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI+RSG++AV  GQME A A G+++ +A   ++ PQA++  IP + SQ+++L+K++SL
Sbjct: 104 LAEIIRSGILAVDYGQMEGARANGMSYVQALWHIVFPQAIKKTIPTIVSQFISLIKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +L++    I  Q    I  + L+   +Y  +   +++    L+ K+A
Sbjct: 164 ATIIVLPELLNHAQIIYGQNSAYILPMFLMIAVMYFIICYALSILSRVLDKKLA 217



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 38/78 (48%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +I + IIG+++G  R    K ++ +    V++ RN+P 
Sbjct: 9   SWINIRFLLEGLWVTVEVSVVSIIASFIIGSVLGVLRYVKIKYLSAVVGFVVDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIP 159
           +++IFF Y  +  +   P
Sbjct: 69  ILIIFFTYFGLPHLGFKP 86


>gi|261400795|ref|ZP_05986920.1| amino acid ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
 gi|269209397|gb|EEZ75852.1| amino acid ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
          Length = 219

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWSYLIDAVPKFSDAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++AVP+GQ+EA  A+GL+  +  R V LPQA     P + +  L L+K +S+  
Sbjct: 103 EAVRAGILAVPKGQVEAGKAIGLSRFQVFRYVELPQAWAVAFPAVAANILFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AVG A+L+ V   +I    +  E + +    YL + + ++L + RL  +I 
Sbjct: 163 AVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLVRRLENRIR 213



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|320174701|gb|EFW49833.1| Glutamate Aspartate transport system permease protein GltK
           [Shigella dysenteriae CDC 74-1112]
          Length = 204

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 6/210 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI V + V+GI+       +      +     P+ + +   +    ++ L+ +   
Sbjct: 1   MITLKITVTAVVIGILWGTMLAVM------RLSSFAPVAWFAKAYVNVFRSIPLVMVLLW 54

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +   P   Q             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+AL
Sbjct: 55  FYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALAL 114

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+TH ++ +L++LPQA R+++P L +Q + L +++SL   +  AD      TI  + G  
Sbjct: 115 GMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQ 174

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 VEMILFAGFVYFVISLSASLLVSYLKRRTA 204



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 33/58 (56%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           T  +  + ++   + GT++   RLS+   VAW  + YV VFR+IP ++V+ + Y  V 
Sbjct: 3   TLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVNVFRSIPLVMVLLWFYLIVP 60


>gi|253690632|ref|YP_003019822.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251757210|gb|ACT15286.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 247

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
                  +T+  +      S VLG +L+       R        +    +  PLL    F
Sbjct: 20  WLWHGFLITLGISLSTIALSTVLGFLLAAARDSQVRVLSSVVVAYSSLFRNTPLLVQLFF 79

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG   L    +   L  + P +     +  +  S EF++    L+ Y++AFIAE +R+
Sbjct: 80  WYFGAGQLFPSEMMQWL--NTPHVISLLGMTLAWPSFEFLAGLAGLTLYSSAFIAEEIRA 137

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V RGQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSL +A+G A
Sbjct: 138 GIRGVARGQKYAAHALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGVA 197

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +  +   +   +Y+ +  ++  +      +
Sbjct: 198 ELSYASRQVETETLRTFQAFGVATVLYIVIIAVMEGWGMWRQQR 241



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 42/90 (46%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +  +     Y   +  GF+ T  ++ S +  +T++G L+ A R S  ++++ +   Y 
Sbjct: 6   QSLESWLLAPQYLIWLWHGFLITLGISLSTIALSTVLGFLLAAARDSQVRVLSSVVVAYS 65

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            +FRN P LV +FF Y     + P      
Sbjct: 66  SLFRNTPLLVQLFFWYFGAGQLFPSEMMQW 95


>gi|153010819|ref|YP_001372033.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151562707|gb|ABS16204.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 218

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 1/204 (0%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            + GI  +L     S       G A  LL +    +   P    I L         +   
Sbjct: 15  LMTGIWWTLIIAVSSSIVSFFGGIAFALLVLYGNWLVRYPVRFFIWLFMGTPLLLQLFLL 74

Query: 254 FNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +  +    ++ P   +  I L  + A + ++I R+ ++ V  GQ E A +LG  + +  R
Sbjct: 75  YYGLSQIGINIPAVWTGIIGLGLHFAVYNSDIFRTAILTVDPGQNEGARSLGFGNGQTLR 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +++PQA+R+ +P + +  + LLK+++L   +G  +LV      I++T    E  +    
Sbjct: 135 YIIVPQAVRNALPQVGNNLIALLKDTALVSVIGITELVHASQQAISETYSPFEFYITAAV 194

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           I+  L++++   ++ +  K+    
Sbjct: 195 IFYVLNLILEAGLHWMEKKVEAYR 218



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 35/93 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   ++ G   T  +A S  I +   G       L  N LV +  R ++ +F
Sbjct: 3   LDFSIVPPYTELLMTGIWWTLIIAVSSSIVSFFGGIAFALLVLYGNWLVRYPVRFFIWLF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
              P L+ +F LY  +  +            G+
Sbjct: 63  MGTPLLLQLFLLYYGLSQIGINIPAVWTGIIGL 95


>gi|262167419|ref|ZP_06035126.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae RC27]
 gi|262024116|gb|EEY42810.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae RC27]
          Length = 246

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------PVLGQFNF 256
             R     +    + +P L +   + FG   L+   L +   F         P      +
Sbjct: 46  WARAIATLYTTIIRGIPDLVLMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAY 105

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LL
Sbjct: 106 LPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILL 165

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  IP   + +L LLK ++L   +G  D+V +       T       +    I+L 
Sbjct: 166 PQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLF 225

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + +    +  L  K ++  +
Sbjct: 226 FTSVSTGLLKLLERKFSIHTR 246


>gi|297518226|ref|ZP_06936612.1| putative transport system permease protein [Escherichia coli OP50]
          Length = 227

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 13/234 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +G F     +        T   I     + G +       L R  H    + L +++I 
Sbjct: 1   MYGGFFALERVETRQWGGLTLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIE 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            +    L T++ ++           +    F+   T   + +   + +  + +A++AE+V
Sbjct: 61  FWRGVPLITVLFMS----------SVMLPLFMAEGTSIDKLIRALVGVILFQSAYVAEVV 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G
Sbjct: 111 RGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTIIALFKDTSLVIIIG 170

Query: 346 FADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             DL S            G + E  +    IY      ++ +   L  +     
Sbjct: 171 LFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLEKRFNTGR 224



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  +A  G+  A   G L+  GR S   +V  +  +++E +R +P + V+F     
Sbjct: 18  GLTLTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVM 77

Query: 152 VLSVL 156
           +   +
Sbjct: 78  LPLFM 82


>gi|294084019|ref|YP_003550776.1| amino acid ABC transporter permease [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663591|gb|ADE38692.1| ABC-type amino acid transport system, permease component
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 379

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 125/285 (43%), Gaps = 21/285 (7%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
             R++ + ++  I  V + ++ N P   +          +        +    +    + 
Sbjct: 109 IWRVNLSFVLFLIALVPI-LWDNTPRRPLALLYSALFPFIATWLVFGGLGLDPV--ETKK 165

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +    LT+        FS  +GI+L+L      R       K L +++I       L  L
Sbjct: 166 IGGIALTLLIGVTGIAFSLPIGIMLAL-----GRTSKLPVLKMLSVIFIEFIRGVPLIAL 220

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + IA     +F  P           T     + + I ++ + +A++AE++R GL  +P+G
Sbjct: 221 LFIASTMLNYFLPP----------GTTFDLLVRVLIMVTFFASAYMAEVIRGGLAGIPKG 270

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA A GLT+ K T L+++PQ ++  IP + + ++ L K+++L + +G  D++ +G +
Sbjct: 271 QIEAAQASGLTYWKTTYLIVMPQVLKISIPGIVNTFIGLFKDTTLVLIIGMFDVLGMGRS 330

Query: 356 II---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   N  G A E+ +     +      ++ +   L  K+  + K
Sbjct: 331 SLADPNWNGLAREVYIFVAIFFFICCYGMSYYSAYLERKLDTENK 375



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 74/196 (37%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  +  +G+  +  IG ++  GR S   ++  +  +++E  R +P + ++F     
Sbjct: 168 GIALTLLIGVTGIAFSLPIGIMLALGRTSKLPVLKMLSVIFIEFIRGVPLIALLFIASTM 227

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   LP      +L   + +     S     +       +            L+ + T  
Sbjct: 228 LNYFLPPGTTFDLLVRVLIMVTFFASAYMAEVIRGGLAGIPKGQIEAAQASGLTYWKTTY 287

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF 266
                +    ++P +  +   +F   TLVLI   +  L   +  L   N+ G +     F
Sbjct: 288 LIVMPQVLKISIPGIVNTFIGLFKDTTLVLIIGMFDVLGMGRSSLADPNWNGLAREVYIF 347

Query: 267 MSLYIALSCYTAAFIA 282
           ++++  + CY  ++ +
Sbjct: 348 VAIFFFICCYGMSYYS 363


>gi|168817911|ref|ZP_02829911.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205344900|gb|EDZ31664.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320086788|emb|CBY96560.1| Nopaline transport system permease protein nocQ [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
          Length = 228

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGLVG-AGAKLSQNRVTGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +   +           ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            THR+  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTHRQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +    +LS N++   I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|119866937|ref|YP_936889.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|119693026|gb|ABL90099.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Mycobacterium sp. KMS]
          Length = 533

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 93/229 (40%), Gaps = 14/229 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L           +I + S ++     L    L+     +       + +  +++
Sbjct: 5   FWYYFTLPELIDGGLLALRIALLSLIIAWPAGLL---LALISDSRWFLPRLAVGVYIWVL 61

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +   Y       VL Q+ +   S  +        A +        EI R GL
Sbjct: 62  RGTPILLQLIFLYN------VLPQWGWQLSSETTAVLGLALNAAAFAA-----EIFRGGL 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV   Q++AA ++GL+       + LPQA+R I P L S+ +  +KN+SLA A+  A+L
Sbjct: 111 NAVNVSQIDAARSIGLSPALTLLRIRLPQALRVITPALASEAIMTVKNTSLASAIAVAEL 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 +++   + + +      IYL+L+ ++ +       ++    ++
Sbjct: 171 TLRSQQLVSINFEYLPVFGAAAAIYLALNTILMVVQYLSERRLDNDRQR 219



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G +    +A   +I A   G L+     S   L      VY+ V R  P L+ + FL
Sbjct: 14  LIDGGLLALRIALLSLIIAWPAGLLLALISDSRWFLPRLAVGVYIWVLRGTPILLQLIFL 73

Query: 149 YKSVLSV 155
           Y  +   
Sbjct: 74  YNVLPQW 80


>gi|90419551|ref|ZP_01227461.1| amino acid ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336488|gb|EAS50229.1| amino acid ABC transporter, permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 499

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 99/227 (43%), Gaps = 20/227 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+         S  LGI+L+L      R       +   +++I  +    L T 
Sbjct: 287 WGGLMVTLVVAVSGIAASLPLGILLAL-----GRRSSMPAVRLFCIVFIEFWRGVPLIT- 340

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL    + L    P    FN         + +   + ++ ++AA++AE++R GL A+P+G
Sbjct: 341 VLFMANFMLPLFLPEGVTFN---------QLLRALVGVALFSAAYMAEVIRGGLQAIPKG 391

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A A+ LT+ +  R+++LPQA+  +IP + + ++ L K++SL   +G ADL+     
Sbjct: 392 QYEGADAMALTYWQKMRMIILPQALTLVIPGIVNTFIGLFKDTSLVYIIGLADLLGTVRR 451

Query: 356 IINQTGQAIEI-----ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             N             ++   FIY      ++ +      ++    K
Sbjct: 452 GFNDPDWITPTTPATGLVFAAFIYWLFCFSMSRYSIYTERRLDTGHK 498


>gi|77460511|ref|YP_350018.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77384514|gb|ABA76027.1| L-arginine ABC transporter membrane protein / L-ornithine ABC
           transporter membrane protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 232

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +      L F  L            F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWEALPLYFGGLVTTLKLLALSLFFGLLAALPLGLMRVSKNAVVN-----GAA 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  + +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRVKMYKRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGVFYLCLTFILVRLFKLAERR 222



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 39/119 (32%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  Y            G V T  L    +    +    +G  R+S N +V     +Y  V
Sbjct: 2   IFDYNVIWEALPLYFGGLVTTLKLLALSLFFGLLAALPLGLMRVSKNAVVNGAAWLYTYV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            R  P LV +F +Y  +     + +  +            L+F   T    A+I   S 
Sbjct: 62  IRGTPMLVQLFLIYYGLAQFEAVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSL 120


>gi|154244132|ref|YP_001415090.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154158217|gb|ABS65433.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 227

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 14/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             + +    ++   + VLG VL      + R       KAL   
Sbjct: 1   MTYQFDFAALLPYWREFAMGVWLTLQLSFVATVLGFVLGTL-CAIGRSDGAPWVKALVAC 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   +I   P LV I + Y           F            ++  +AL     A+ +
Sbjct: 60  YVE--VIRNTPLLVQIFIIY-----------FGIATLGLHVDANVAAVLALVVNVGAYTS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL ++ + Q+EAA  LGL+  +    V++  A+  + P LTSQY+ L+  SS+  
Sbjct: 107 EIVRAGLESIHKSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQYVLLMLASSITS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +L +V   I + T ++ E  ++   +YL+LS ++ +        + ++ +K
Sbjct: 167 QISAEELTAVANRIQSDTFRSFETYIVVGVLYLALSFVVRIAFWLFGLVVFVRRRK 222



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 41/95 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + +   Y     +G   T  L+F   +   ++GTL   GR      V  +   YVEV R
Sbjct: 6   DFAALLPYWREFAMGVWLTLQLSFVATVLGFVLGTLCAIGRSDGAPWVKALVACYVEVIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P LV IF +Y  + ++    D ++     + +N
Sbjct: 66  NTPLLVQIFIIYFGIATLGLHVDANVAAVLALVVN 100


>gi|121728667|ref|ZP_01681685.1| arginine ABC transporter, permease protein [Vibrio cholerae V52]
 gi|121629078|gb|EAX61524.1| arginine ABC transporter, permease protein [Vibrio cholerae V52]
          Length = 222

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 6/218 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      +  + ++   S ++G +LSL  T +S               I+ F   G P
Sbjct: 4   QHLWQLFEGLGISLQLTAASLLVGCILSLLMT-VSLVMRTPVVDWFSRAVITLFT--GTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I L Y        + +   +    +S  +    +AL+  TAA+  ++ +    A+P
Sbjct: 61  LLVQIFLVYYGPGQFEWIRE--SVLWVWLSQPWFCAMLALALNTAAYSTQLFKGAFNAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+   
Sbjct: 119 SGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 178 QRINAQTYDTLTVFGIAGTFYLTVNGILTLIFRQIEKK 215


>gi|320530102|ref|ZP_08031172.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
 gi|320137535|gb|EFW29447.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
          Length = 244

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 8/219 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +D    +   S   G +L       +     +  +AL  +Y+           
Sbjct: 6   LPDLLAYLDVTLLVAGISIAAGSLLGGLL-AWANLGGARPLRALAAVYVYVMRCTPS--- 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             I L + + +  P L Q  F          +   I  +    A+I+E+ R+   AVPRG
Sbjct: 62  --IVLLFIVFYGLPKLLQGAFGIDMNGMNRAVFAVITFTLLFGAYISEVFRAAYKAVPRG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAAI  GL+  +A   V+LPQA    +P   +  +NLLK  SLA  +G  DL+  G  
Sbjct: 120 QYEAAICAGLSPVQAFAHVMLPQAAIVALPNFGNASINLLKEGSLAYTIGLIDLIGKGNL 179

Query: 356 IINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           II Q      IEI L  M +Y ++ +++     ++  ++
Sbjct: 180 IIAQNFGAYGIEIYLACMLVYWAVVLLLEQVFTQVERRL 218


>gi|304391887|ref|ZP_07373829.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein BztC [Ahrensia sp. R2A130]
 gi|303296116|gb|EFL90474.1| glutamate/glutamine/aspartate/asparagine transport system permease
           protein BztC [Ahrensia sp. R2A130]
          Length = 432

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 19/304 (6%)

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            LA+  +   TI G L+    ++   +        V     +   V +  L+   L    
Sbjct: 143 LLAYWLIWGGTIWGPLMIIAMIALAFVAFKAVAKSVNPVVGLLAAVAVGILWMLFLHDPI 202

Query: 158 IPDHSIVLPFGMFL-NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
           +   S  +  G+    +  L    +T        V S  +GI+L+L      R     T 
Sbjct: 203 VSALSSAVNVGLEPVESSKLGGFQITFIIGVTGIVASLPIGILLAL-----GRGSDMPTL 257

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K + + +I       L TL+ +A     +F  P           T     + + I ++ +
Sbjct: 258 KMICVGFIEFIRGVPLITLLFVASTLLNYFLPP----------GTNFDIVLRVIIMVTLF 307

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE++R GL A+P+GQ EAA ALGL + +ATRL++LPQA++  IP + + ++ L K
Sbjct: 308 ASAYMAEVIRGGLAALPKGQYEAADALGLNYWQATRLIILPQALKISIPGIVNTFIGLFK 367

Query: 337 NSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++ L   +G  D + +   I +     G   E+ +    ++     +++ +      K+ 
Sbjct: 368 DTVLVSIIGILDPIGIMQPIRSSAEWNGIIWELPIFVGLVFFIFCFLMSRYSMYFERKLD 427

Query: 394 LKEK 397
              +
Sbjct: 428 TGHR 431


>gi|302868069|ref|YP_003836706.1| polar amino acid ABC transporter inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315505534|ref|YP_004084421.1| polar amino acid abc transporter, inner membrane subunit
           [Micromonospora sp. L5]
 gi|302570928|gb|ADL47130.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315412153|gb|ADU10270.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora sp. L5]
          Length = 256

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 16/246 (6%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           + P+            +        T+ +     + V + +LG VL +    ++     +
Sbjct: 1   MDPLSTLWETFFDWDSMREALPEMLTVGLPNTLTLAVSAALLGSVLGMLL-AVAGISRTR 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             +    +Y   F        +L+           +      + G    P      +ALS
Sbjct: 60  WLRWPARVYTDVFRGLPAAATILLI-------GVGLAPLGMQVWGPNPYPL---GVLALS 109

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA++ EI R+G+++V   Q+E A ALG +  +A RLV++PQ +R ++P   +Q + L
Sbjct: 110 LIAAAYLGEIFRAGILSVEAAQLEGARALGFSWGEAMRLVIIPQGVRRVLPAWVNQLIAL 169

Query: 335 LKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +K+SSL   +G      +L  +G      TG     +L+    YL L++ +   +N L+ 
Sbjct: 170 IKDSSLVYFLGLLASQRELFRIGQDYAANTGNQ-SALLLAGLFYLVLTVPLTHAVNWLDR 228

Query: 391 KIALKE 396
           ++    
Sbjct: 229 RLRQGR 234



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 4/155 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP----PLVV 144
           + VG  NT  LA S  +  +++G L+    +S  + + W  RVY +VFR +P     L++
Sbjct: 25  LTVGLPNTLTLAVSAALLGSVLGMLLAVAGISRTRWLRWPARVYTDVFRGLPAAATILLI 84

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
              L    + V     + + +     +    L         + +         +  S   
Sbjct: 85  GVGLAPLGMQVWGPNPYPLGVLALSLIAAAYLGEIFRAGILSVEAAQLEGARALGFSWGE 144

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   +   + LP        +    +LV   
Sbjct: 145 AMRLVIIPQGVRRVLPAWVNQLIALIKDSSLVYFL 179


>gi|209549160|ref|YP_002281077.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209534916|gb|ACI54851.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 384

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/255 (20%), Positives = 110/255 (43%), Gaps = 18/255 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLS 208
            L+ + +     ++ F +     GL      +     + +    +GI +SL       L 
Sbjct: 140 GLNAILLFAALPIIAFWLLHGGYGLEVVETPLWGGLMVTLVLSFVGIAVSLPCGILLALG 199

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + L + +I       L T++ +A           +    F+       + + 
Sbjct: 200 RRSKMPVIRMLCVTFIEVIRGVPLITVLFMA----------SVMLPLFLPTGWNVDKLLR 249

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I +S +T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + 
Sbjct: 250 ALIGVSIFTSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIV 309

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIAL 383
           + ++   K++SL   +G  DL+ +     +          I  ++   FI+      ++ 
Sbjct: 310 NTFIGTFKDTSLVTIIGMFDLLGIVKQNFSDANWASAVTPITGLIFAGFIFWLFCFGMSR 369

Query: 384 FMNRLNAKIALKEKK 398
           +   +   +    K+
Sbjct: 370 YSGFMERHLDTGHKR 384



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 36/77 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +   G L+  GR S   ++  +C  ++EV R +P + V+F  
Sbjct: 171 LWGGLMVTLVLSFVGIAVSLPCGILLALGRRSKMPVIRMLCVTFIEVIRGVPLITVLFMA 230

Query: 149 YKSVLSVLPIPDHSIVL 165
              +   LP   +   L
Sbjct: 231 SVMLPLFLPTGWNVDKL 247


>gi|146310839|ref|YP_001175913.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145317715|gb|ABP59862.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 246

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 67/246 (27%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSL 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVVPELLPENLGMWFKSELDPNIQF-----------FVS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VRSG+ ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMLCLGLFTAARVCEQVRSGIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINTVIMLVMNLV 233

Query: 389 NAKIAL 394
             K  L
Sbjct: 234 ERKTRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNRFLSSLGTLYVELFRNVPLIVQFFTWYLVVPELLPENLGMW 99


>gi|322833891|ref|YP_004213918.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169092|gb|ADW74791.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 225

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F       GL +    M    KI   + V+GI+       + R    K        Y
Sbjct: 1   MHEFDWSSIGPGLPYLWQGMVITLKITSLAIVVGILWGTLL-AVMRLSTFKPISWFASAY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A + + AA+ +E
Sbjct: 60  VNLFRAVP---LVMVLLWFYL--IVPGFLQKVLGLSPKTDIRLISAMVAFALFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+I++ RGQ  AA+ALG+T  ++ +LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIISIARGQSSAALALGMTQWQSMKLVILPQAFRAMVPLLLTQAIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +G AD       I ++ G  +E++L    IY  +S+  +L +  L  +
Sbjct: 175 LGLADFFRSASNIGDRDGTLVEMVLFAGLIYFVISLCASLLVRYLKKR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 36/76 (47%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       +  G V T  +    ++   + GTL+   RLS  K ++W    YV +FR
Sbjct: 5   DWSSIGPGLPYLWQGMVITLKITSLAIVVGILWGTLLAVMRLSTFKPISWFASAYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVL 153
            +P ++V+ + Y  V 
Sbjct: 65  AVPLVMVLLWFYLIVP 80


>gi|319780744|ref|YP_004140220.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166632|gb|ADV10170.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 269

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 8/205 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVL 237
                 FV +  +G+ ++L     SR       F+ +  + +P+L +  F I        
Sbjct: 51  FVTVVAFVLASAIGLGIALMGMSGSRWLRQIARFYVEIIRGVPIL-VLLFWIAFAGAPAF 109

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +A    L       G F  +             +AL+   +AFI+E+ R+G+ AV +GQ+
Sbjct: 110 VAAWNALTAPLQSAGLFGEL-LVRDVSLLWRAIMALTIGYSAFISEVFRAGIQAVEKGQI 168

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALGLT  +  RL++ PQA+R+I+PPL + ++ L+K+SSL   +G AD+  +G    
Sbjct: 169 EAAKALGLTRAQRFRLIVFPQAIRTILPPLGNDFVALVKDSSLVSVLGVADITQMGKVYA 228

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIA 382
             + +  E   I  +IYL L++ ++
Sbjct: 229 AGSFRFFETYSITAYIYLILTVGLS 253



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T ++     + A+ IG  +    +S ++ +  I R YVE+ R +P LV++F++  +
Sbjct: 45  GIGVTIFVTVVAFVLASAIGLGIALMGMSGSRWLRQIARFYVEIIRGVPILVLLFWIAFA 104

Query: 152 VLSVLPIPDH 161
                    +
Sbjct: 105 GAPAFVAAWN 114


>gi|241765004|ref|ZP_04763000.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241365401|gb|EER60194.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 252

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 86/177 (48%), Gaps = 8/177 (4%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            + L      L   +P LV I L Y                     P F+ + +AL  +T
Sbjct: 71  VVRLCNAWVELFRNIPLLVQIFLWY--------HVVPTLFPALQAVPGFVLVVLALGFFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A IAE VRSG+ A+PRGQ  A +A+G T  +  R VLLP A R IIPPLTS+ +N+ KN
Sbjct: 123 SARIAEQVRSGIQALPRGQRYAGLAMGFTTFQTYRHVLLPMAFRIIIPPLTSETMNIFKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           SS+A AV  A+L         +T + +E+ L     Y+  +  I   M  +  +  +
Sbjct: 183 SSVAFAVSVAELTMFAMQAQEETSRGVEVYLAVTACYVVSAFAINRIMAFIEKRARI 239



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIPPL 142
           +Y   +L  +  T  ++   ++ A ++G L+G  R L    +V  +C  +VE+FRNIP L
Sbjct: 29  TYLDWMLSAWGWTVSVSLLALLLALVLGALIGTLRTLEGRPMVVRLCNAWVELFRNIPLL 88

Query: 143 VVIFFLYKSVLSVLP 157
           V IF  Y  V ++ P
Sbjct: 89  VQIFLWYHVVPTLFP 103


>gi|209546301|ref|YP_002278191.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539158|gb|ACI59091.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 234

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +F  S   G +L+L    + R    +    +   YI  F+  G P L+ + L + 
Sbjct: 18  PTTLILFSLSIFFGGLLALVIVSM-RVSGNRVLSGIAKGYI--FVFRGSPLLIQMFLVFY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EA
Sbjct: 75  ------GLGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEA 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++     R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+Q
Sbjct: 129 ARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQ 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T + +E+ L    IYL L+ +I   M  L   ++   +
Sbjct: 189 TYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRR 226



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 38/79 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T  +S    +L     T  L    +    ++  ++ + R+S N++++ I + Y+ VF
Sbjct: 1   MDFTFLASTMVTLLKAVPTTLILFSLSIFFGGLLALVIVSMRVSGNRVLSGIAKGYIFVF 60

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P L+ +F ++  +   
Sbjct: 61  RGSPLLIQMFLVFYGLGQF 79


>gi|119387646|ref|YP_918680.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378221|gb|ABL72984.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 251

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 18/241 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
              ++    F      + L     T   +    +F F+LG +L++      R    K  +
Sbjct: 24  RMTYTFDFSFLAEYWPQLLKGLVQTAQLSLLSIIFGFLLGTLLAI-----GRTAQSKLLR 78

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +Y+    I   P LV + + Y           F                +A+    
Sbjct: 79  RICAIYVEA--IRNTPLLVQMFMIY-----------FGLASVGFKLSAEFCAVLAIVINV 125

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +++  EI+R+G+ +V +GQ EA+  LGLT  ++  LV+LP A   + P L SQ++ ++  
Sbjct: 126 SSYTCEIMRAGIESVRKGQREASDCLGLTWLQSLFLVVLPPATERVYPALVSQFILIMLA 185

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +SL   +   +L S    I + T ++ EI  +   IY+ L+ +  L    L+  +  + +
Sbjct: 186 TSLVSQISAEELTSTAARIDSMTFRSFEIYTVVALIYIGLAFVFRLGFWALSRLVFPRLR 245

Query: 398 K 398
           +
Sbjct: 246 R 246



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 44/78 (56%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++  + Y   +L G V T  L+   +I   ++GTL+  GR + +KL+  IC +YVE  R
Sbjct: 30  DFSFLAEYWPQLLKGLVQTAQLSLLSIIFGFLLGTLLAIGRTAQSKLLRRICAIYVEAIR 89

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV +F +Y  + SV
Sbjct: 90  NTPLLVQMFMIYFGLASV 107


>gi|293605348|ref|ZP_06687733.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816287|gb|EFF75383.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 367

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 18/240 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +    ++ N       LT+        F+F +G++L+L      R       KAL +
Sbjct: 143 WGGVFGLTYVENSRWGGLPLTLILATFGIAFAFPIGVLLAL-----GRRSKMPAIKALCV 197

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YI       L +L+ ++           +    F+       + +   IA+  + AA+I
Sbjct: 198 VYIELIRGVPLISLLFMS----------SVMLPLFLPEGFTIDKLLRAQIAIIMFAAAYI 247

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VR GL A+P+GQ E A +LGL + +  R ++LPQA++ +IPPL   +++L K++SL 
Sbjct: 248 AETVRGGLQAIPKGQYEGADSLGLNYWQQMRKIILPQALKIVIPPLVGIFISLFKDTSLV 307

Query: 342 VAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V +G  DL       ++     G  +E  L    IY      ++ +   L  ++A    +
Sbjct: 308 VIIGIFDLTLAAKAALSDAAWRGFGVEAYLFISLIYFVFCYSMSKYSQALEQRLATGHAR 367


>gi|227113999|ref|ZP_03827655.1| L-amino acid ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 362

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/340 (20%), Positives = 131/340 (38%), Gaps = 54/340 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G     G+ P         A+ +  ++         I    + T+   GR  
Sbjct: 72  WVFIHARFG-HFMYGLYPAEEVWRINFALAIALLS---------ILPMFLKTIPYRGR-- 119

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+    PL+  + LY                     +        T
Sbjct: 120 -----------YIAVWTVAYPLIAWWLLYSG-------------FGGLSRVETYQWGGLT 155

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 156 LTLIIAAVGIAGALPLGILLAL-----GRRSTLPIVRMLSVIFIEFWRGVPLITVLFMS- 209

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 210 ---------SVMLPLFLTEGTTIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 260

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + +   LV+LPQA++ +IP L +  ++L K++SL + +G  DL S         
Sbjct: 261 ESLGLGYWRMQGLVILPQALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFSSIQQATVDP 320

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G + E  +    +Y      ++ +   L  +     K
Sbjct: 321 TWLGMSTEGYVFAAMVYWIFCFSMSRYSQHLENRFNTGHK 360


>gi|256832192|ref|YP_003160919.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
 gi|256685723|gb|ACV08616.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
          Length = 279

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 15/187 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +   +I  F       +V     + + F  P+        G  +      
Sbjct: 99  RLSSVGLYRWIATGWIEFFRGIPALLVV-----FTVGFAVPIAF------GVRIDSITAK 147

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL   ++A+IAE +R+G+ AVP GQ+EAA +LG++  +    V LPQA R ++PP+T
Sbjct: 148 AALALGIVSSAYIAETIRAGIQAVPPGQIEAARSLGMSPMRTMLTVTLPQAFRIVLPPMT 207

Query: 329 SQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           ++ + L K++SL   +G +    DL  VG   +N     +  + +    YL ++I +   
Sbjct: 208 NELILLTKDTSLVYLLGLSAAAYDLTKVGRDTLNSGIGGLTGLFVVGAAYLCITIPLGFL 267

Query: 385 MNRLNAK 391
              L  K
Sbjct: 268 ARWLEKK 274



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           +NT             +G L+   RLS+  L  WI   ++E FR IP L+V+F +  +V 
Sbjct: 75  LNTITYTVLAFALGLALGILLALMRLSSVGLYRWIATGWIEFFRGIPALLVVFTVGFAVP 134

Query: 154 SVL 156
              
Sbjct: 135 IAF 137


>gi|188533324|ref|YP_001907121.1| Histidine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
 gi|188028366|emb|CAO96227.1| Histidine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 228

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 90/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +        +T++      VF+ +LG++ +      SR           +    T LI 
Sbjct: 5   YSEVIFKGALVTLELALSSVVFAVLLGLIGAGAKLSNSRPLA-------AIFEGYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +                        ++  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIALNQVTDFLGFAQFDIDPMVAGIITLGFIYGAYFTETFRGAWM 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ+EAA A G TH +  R +L P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 SVPKGQVEAATAFGFTHSQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T Q     ++   IYL  + +    +  L  +  +  K+
Sbjct: 178 KATQLAGKSTWQPFWFAIVAGIIYLIFTTLSNGVLWWLERRYTVGVKR 225



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 36/68 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I  G + T  LA S ++ A ++G +    +LS ++ +A I   Y  + R +P LV+
Sbjct: 5   YSEVIFKGALVTLELALSSVVFAVLLGLIGAGAKLSNSRPLAAIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|33151970|ref|NP_873323.1| arginine transporter permease subunit ArtQ [Haemophilus ducreyi
           35000HP]
 gi|33148192|gb|AAP95712.1| arginine transport system permease protein [Haemophilus ducreyi
           35000HP]
          Length = 221

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +                 + V S ++G+ LS+    L  +      +      +   L  
Sbjct: 1   MFTEYFPLLYSATLVTLGLAVCSLLVGLCLSILFVALEMNKQAFIRQPTT---VFLTLSR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           GLP ++++ L +    +          G       F    +ALS   AA+ ++ +R  + 
Sbjct: 58  GLPEILVVLLIFFGSTELVEK----ITGEYVEFSAFGCGVLALSLIFAAYASQSLRGAIQ 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ ++  ALGL+       +++PQ  R  +P L++Q+L LLK+++L   +G  DL+
Sbjct: 114 AVPNGQWQSGAALGLSRSYTFWHIVMPQVWRHALPGLSNQWLVLLKDTALISLIGVNDLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                I     Q          IYL+++++  + + +L       E+
Sbjct: 174 RQTDLINTNEHQPFTWYGFSALIYLAITLISQVIIAKLAQHFTRFER 220


>gi|116255277|ref|YP_771110.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259925|emb|CAK03019.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 222

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +   +L IV+ +    L R    K  + L + ++   LI   P LV I   Y    
Sbjct: 25  FLLAICGMLLAIVIGIGGVAL-RDSALKPARWLVIAFVE--LIRNTPFLVQIFFIY---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F             +  IAL     A+  EI+R G+ ++P+GQMEA +ALGL 
Sbjct: 78  -------FALPLTGIRLDPTPTAIIALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLH 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  RL++L  A+R+I P LTSQ++ L   +S+A A+   +L SV   I +++ ++ E+
Sbjct: 131 KAQVFRLIILKPALRAIYPSLTSQFVLLTLTTSIASAISAYELTSVSQRIESESFRSFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                  Y  +S ++     + +A+ 
Sbjct: 191 YFTVTVFYFVISWLMMRIFAQFSARY 216



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 48/96 (50%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T       ++L+G + TF LA  GM+ A +IG    A R SA K   W+   +VE+ 
Sbjct: 5   LDFTPVIDGLPSLLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPARWLVIAFVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P LV IFF+Y ++       D +      + +N
Sbjct: 65  RNTPFLVQIFFIYFALPLTGIRLDPTPTAIIALGIN 100


>gi|295703709|ref|YP_003596784.1| putative amino acid ABC transporter permease [Bacillus megaterium
           DSM 319]
 gi|294801368|gb|ADF38434.1| putative amino acid ABC transporter, permease protein [Bacillus
           megaterium DSM 319]
          Length = 233

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 8/229 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +   L +  +         +   +L  +L  F   L R   +     +  +Y+S   +
Sbjct: 6   FHDWLKLLWQVVDKLPLTLFMLGLSLLFSLLLGFVIALIRIQKKPVLSKMATIYLSF--M 63

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P LV + L Y   F  P L     I           L IA S +TAA ++E++RS  
Sbjct: 64  RCTPLLVQLFLVY---FGLPQLLLLVHID-INSWSRITFLVIAFSLHTAAPLSEVIRSAY 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ EAA ++G+ + ++ R ++LPQA  + +P + +  ++LLK+++LA ++G  D+
Sbjct: 120 FSIDKGQFEAAYSIGMNYFQSLRRIILPQAFVAALPNVGNATISLLKDTALAFSIGIIDI 179

Query: 350 VSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     I+         EI +    +Y S+ I+I + ++ L   +    
Sbjct: 180 MGQVRLILGNNYGIGMFEIYVTISLVYWSICIVIEIIVSYLEKHLKKGR 228


>gi|197284336|ref|YP_002150208.1| glutamate/aspartate ABC transporter permease [Proteus mirabilis
           HI4320]
 gi|194681823|emb|CAR41084.1| glutamate/aspartate ABC transporter, permease protein [Proteus
           mirabilis HI4320]
          Length = 246

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 113/227 (49%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             +S   +T+  +   ++ +F++G    +  T  +R        + +  + +PL+     
Sbjct: 24  WLISGFQVTVALSLCAWIIAFIVGSFFGILRTVPNRLLSSLGAIYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+  A+      D     QF           F+S  + L  +TAA + E VR+
Sbjct: 84  WYLVIPELLPQAIGDWFKMDLTPNIQF-----------FVSSALCLGLFTAARMCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++PRGQ  A +ALGLT  +  R VLLP A R IIPP+TS+ LNL+KNS++A  +G  
Sbjct: 133 AINSLPRGQKAAGLALGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLI 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +    +++ + +A E        Y+ ++++I L M+ L  ++ L
Sbjct: 193 DMAAQANKLLDYSAKAYESFTAITLAYVFINVIIMLIMHWLEKRVRL 239



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 10/111 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   ++ GF  T  L+    I A I+G+  G 
Sbjct: 3   IDWDWGIFFQEAPFG----------NTTYLGWLISGFQVTVALSLCAWIIAFIVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            R   N+L++ +  +YVE+FRN+P +V  F  Y  +  +LP          
Sbjct: 53  LRTVPNRLLSSLGAIYVELFRNVPLIVQFFTWYLVIPELLPQAIGDWFKMD 103


>gi|110678763|ref|YP_681770.1| amino acid ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109454879|gb|ABG31084.1| amino acid ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 432

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 19/258 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   L    L  L IP+++        + +R L    L M         S  LGIVL+L 
Sbjct: 190 IAAALIVWNLGGLLIPENANDTAMMTAVPSRDLGGFMLNMMLGVTCVSLSVPLGIVLAL- 248

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       K + +++I       L TL+ +A     +F  P           +  
Sbjct: 249 ----GRQSSMPLIKWICVIFIEFIRGVPLITLLFVASVMLAYFFPPE----------STV 294

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F+ + I ++ +++A+IAE++R GL A+P+GQ E A +LGL + +ATRL++LPQA++  
Sbjct: 295 DLFLRVVIMITMFSSAYIAEVIRGGLAALPKGQYEGADSLGLDYAQATRLIILPQALKIS 354

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-IINQT---GQAIEIILIWMFIYLSLSI 379
           IP + +  + L K+++L   +   DLV +    I+  T   G   E+      ++  +  
Sbjct: 355 IPGIVNVAVGLFKDTTLVSVISMFDLVGMIRGPILASTDWAGVYWELYGFAALLFFVVCY 414

Query: 380 MIALFMNRLNAKIALKEK 397
            I+ +   L  ++A   +
Sbjct: 415 GISQYSQWLERRLATDHR 432


>gi|84496802|ref|ZP_00995656.1| putative glutamate transporter [Janibacter sp. HTCC2649]
 gi|84383570|gb|EAP99451.1| putative glutamate transporter [Janibacter sp. HTCC2649]
          Length = 223

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 10/226 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L     T+       + S VLG ++++      R    +  + L   Y++ F   
Sbjct: 8   YGDDILKAFGGTILLAILSTIGSMVLGTIVAVL-----RLSPVRILQMLGTWYVNIFRNT 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  L++ ++          +   N          F    + LS Y  AFI E +RSG+ 
Sbjct: 63  PLTLLMVFSI-----LGLTYILGINLDPTDIQGNAFRWAVVVLSIYHGAFICEALRSGVN 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP GQ EAA A+GLT  ++ R VLLPQA R  I P+ S  + L KN+++A  +G  +  
Sbjct: 118 TVPLGQAEAARAIGLTFGQSMREVLLPQAFRGAIAPIGSTIIALTKNTTVAAVIGVGEAT 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    II   G  I I LI+   ++ L++ +      L+ ++A+K 
Sbjct: 178 NAMNVIIENEGSGITIFLIFALGFVILTLPLGTAFTALSRRLAVKR 223



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 40/89 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   IL  F  T  LA    I + ++GT+V   RLS  +++  +   YV +FRN P  +
Sbjct: 7   TYGDDILKAFGGTILLAILSTIGSMVLGTIVAVLRLSPVRILQMLGTWYVNIFRNTPLTL 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++ F    +  +L I      +    F  
Sbjct: 67  LMVFSILGLTYILGINLDPTDIQGNAFRW 95


>gi|261823781|ref|YP_003261887.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607794|gb|ACX90280.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 247

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLS------LFATRLSRHFHEKTGKALPLLYISTF 227
                  +T+  +    V S V G +L+      +   R     +    +  PLL    F
Sbjct: 20  WLWHGFLITLGLSLGTVVLSTVSGFLLAAARDSQIHVLRGVVVAYSSLFRNTPLLVQLFF 79

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG   L    +   L  + P       +  +  S EF++    L+ Y++AFIAE +RS
Sbjct: 80  WYFGAGQLFPSEMMQWL--NAPHAISLLGMTLAWPSFEFLAGLAGLTLYSSAFIAEEIRS 137

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V  GQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSL +A+G A
Sbjct: 138 GIRGVAHGQKYAAQALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGVA 197

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +  +   +   +Y+ +  ++  +      +
Sbjct: 198 ELSYASRQVETETLRTFQAFGVATVLYIVIIAVMEGWGMWRQQR 241



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 40/90 (44%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +  +     Y T +  GF+ T  L+   ++ +T+ G L+ A R S   ++  +   Y 
Sbjct: 6   QSLESWLLAPQYLTWLWHGFLITLGLSLGTVVLSTVSGFLLAAARDSQIHVLRGVVVAYS 65

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            +FRN P LV +FF Y     + P      
Sbjct: 66  SLFRNTPLLVQLFFWYFGAGQLFPSEMMQW 95


>gi|253686633|ref|YP_003015823.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753211|gb|ACT11287.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 362

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 71/340 (20%), Positives = 133/340 (39%), Gaps = 54/340 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G     G+ P         A+ +G ++         I    + ++   GR  
Sbjct: 72  WVFIHARFG-HFMYGLYPAAEIWRINFALTIGLLS---------ILPMFLKSIPYRGR-- 119

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+ V+    PL+  + LY                     +        T
Sbjct: 120 -----------YIAVWAVAYPLIAWWLLYGG-------------FGGLSRVETYQWGGLT 155

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L      R       + L +++I  +    L T++ ++ 
Sbjct: 156 LTLIIAAVGIAGALPLGILLAL-----GRRSTLPIVRMLSVVFIEFWRGVPLITVLFMS- 209

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 210 ---------SVMLPLFLTEGTTIDKLLRALVGVILFQSAYVAEVVRGGLQALPKGQYEAA 260

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +LGL + +   LV+LPQA++ +IP L +  ++L K++SL + +G  DL S         
Sbjct: 261 ESLGLGYWRMQGLVILPQALKMVIPGLVNTIISLFKDTSLVIIIGLFDLFSSIQQATVDP 320

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              G + E  +    +Y      ++ +   L ++     K
Sbjct: 321 TWLGMSTEGYVFAAMVYWIFCFSMSRYSQHLESRFNTGHK 360


>gi|239831567|ref|ZP_04679896.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239823834|gb|EEQ95402.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 387

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 127/307 (41%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   +S    V     ++  +   + PL++     K + ++L   
Sbjct: 94  ACWAFVNAKYEQFLYGRYPISERWRVNLTALIFAVL---LVPLLIPKAPKKGLNAILFFF 150

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              IV  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 151 VFPIVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVI 210

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +A  +++I       L T++ +A      F  P               + +   I ++ +
Sbjct: 211 RAFSIIFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 260

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T L++LPQA++ +IP + + ++ L K
Sbjct: 261 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLIILPQALKLVIPGIVNTFIGLFK 320

Query: 337 NSSLAVAVGFADLVSV-----GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +                   ++   F++      ++ +   +  +
Sbjct: 321 DTSLVYIIGMFDLLGIVRQNFADANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 380

Query: 392 IALKEKK 398
           +    K+
Sbjct: 381 LDTGHKR 387



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++     +++E+ R +P + V+F  
Sbjct: 174 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIRAFSIIFIEMVRGVPLVTVLFMA 233

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 234 SVMLPLFLPP 243


>gi|196230490|ref|ZP_03129352.1| polar amino acid ABC transporter, inner membrane subunit
           [Chthoniobacter flavus Ellin428]
 gi|196225420|gb|EDY19928.1| polar amino acid ABC transporter, inner membrane subunit
           [Chthoniobacter flavus Ellin428]
          Length = 247

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 18/258 (6%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
            + R +  +     L         + D+              L     T+  +A    FS
Sbjct: 3   RLTRILSFIAAFVLLAGICAGAFALLDYHWNWAQAASYWRLFLDGWLTTVGISALAIPFS 62

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++G++L+L          +          I   L  G P LV + + +           
Sbjct: 63  CLIGMLLALARRAPIMPLRDAV-------QIFVELTRGTPLLVQLFIYWY---------- 105

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
             F    +     ++  + LS +  A+I+EI R+G+  V   Q+E A +LG +  +  R 
Sbjct: 106 -AFGEKLSSDLRLIAGALTLSFFEGAYISEIFRAGIEGVGASQLETARSLGFSRVQTYRY 164

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+ P A+R  +PPL  Q+ +++K+SSL   +G A+         + T    EI L     
Sbjct: 165 VIFPLALRQSLPPLAGQFASIIKDSSLLSVLGIAEFSLAATQTNSITYTTFEIYLPVALG 224

Query: 374 YLSLSIMIALFMNRLNAK 391
           YL L++ I+L+  RL  +
Sbjct: 225 YLILTLPISLWTQRLEQR 242



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 35/76 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   +SY    L G++ T  ++   +  + +IG L+   R +    +    +++VE+ R 
Sbjct: 34  WAQAASYWRLFLDGWLTTVGISALAIPFSCLIGMLLALARRAPIMPLRDAVQIFVELTRG 93

Query: 139 IPPLVVIFFLYKSVLS 154
            P LV +F  + +   
Sbjct: 94  TPLLVQLFIYWYAFGE 109


>gi|167758443|ref|ZP_02430570.1| hypothetical protein CLOSCI_00783 [Clostridium scindens ATCC 35704]
 gi|167664340|gb|EDS08470.1| hypothetical protein CLOSCI_00783 [Clostridium scindens ATCC 35704]
          Length = 216

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 97/212 (45%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 VFS  LG+ ++       R    K  + L  +YIS  ++ G P ++ + + Y  
Sbjct: 20  IFVLTLVFSLPLGLAVAF-----GRMSKIKPVQWLAKIYIS--IMRGTPLMLQLMVVYFG 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +       + F    + +    ++ I  +   AA+ AEI R G+ ++  GQ EAA  LG
Sbjct: 73  PY-------YIFGIRISSTYRMTAVLIGFAINYAAYFAEIYRGGIESMSVGQYEAAKVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +    ++ PQ ++ I+P +T++ + L+K++SLA  +  A++ ++   I      ++
Sbjct: 126 YSRPQTFFCIIFPQVIKRILPSVTNEVITLVKDTSLAFVLAVAEMFTIAKQIAAA-QTSM 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +     Y   ++++A+ M  L  K+    
Sbjct: 185 VPFVAAGIFYYVFNLIVAVVMEALEKKLNYYR 216



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 32/68 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +  G + +  +    ++ +  +G  V  GR+S  K V W+ ++Y+ + R  P ++
Sbjct: 5   TLIRELSGGMLISIEIFVLTLVFSLPLGLAVAFGRMSKIKPVQWLAKIYISIMRGTPLML 64

Query: 144 VIFFLYKS 151
            +  +Y  
Sbjct: 65  QLMVVYFG 72


>gi|241765005|ref|ZP_04763001.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241365402|gb|EER60195.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 221

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 106/235 (45%), Gaps = 17/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    ++N  L     ++       +   + G VL+L      R   +K       
Sbjct: 4   DFSFYNWDLISNFVLKGLYFSLLLTLVATIGGVIFGTVLALM-----RLSGKKWLDMPAT 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y++     G+ ++ L+ +        P +               +S  +    + AA+ 
Sbjct: 59  VYVN-----GMRSIPLVMVILWFFLLVPAIIGRPIGAE-------VSAVVTFVAFEAAYF 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ +VPRGQ+ A  ALG+T+ +  +LV+LPQA R+++P L +Q + L +++SL 
Sbjct: 107 SEIMRAGIQSVPRGQVFAGQALGMTYGQNMKLVVLPQAFRNMLPVLLTQTIILFQDTSLV 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+G  D++          G+ IE  L    +Y  +   ++  + RL+ KIA+  
Sbjct: 167 YAIGAYDMLKGFEVAGKNFGRPIEAYLAAAVLYFVMCYALSWMVKRLHQKIAIIR 221



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 2/155 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  L     I   I GT++   RLS  K +     VYV   R+IP ++VI + +
Sbjct: 18  LKGLYFSLLLTLVATIGGVIFGTVLALMRLSGKKWLDMPATVYVNGMRSIPLVMVILWFF 77

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             V +++  P  + V     F+      F  +       +       G  L +   +  +
Sbjct: 78  LLVPAIIGRPIGAEVSAVVTFVAFEAAYFSEIMRAGIQSVPRGQVFAGQALGMTYGQNMK 137

Query: 210 H--FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                +     LP+L   T ++F   +LV     Y
Sbjct: 138 LVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAY 172


>gi|284163419|ref|YP_003401698.1| polar amino acid ABC transporter inner membrane protein
           [Haloterrigena turkmenica DSM 5511]
 gi|284013074|gb|ADB59025.1| polar amino acid ABC transporter, inner membrane subunit
           [Haloterrigena turkmenica DSM 5511]
          Length = 277

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 8/238 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR---LSRHFHEKTG---KA 218
             F        L    +++       +  F+ G       T     SR F  K G   + 
Sbjct: 35  WEFVYRNAEYLLWGAVISVLLTVTSILLGFLAGFPAGAIETYGNGYSRAFVRKFGVLLRG 94

Query: 219 LPLLYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            P+L I     + L   +V  A++        VLG   F     V   F++  +AL   +
Sbjct: 95  TPILVIMFITFYALPYEIVHDAVEALFSALDFVLGPTPFTAAVDVPGAFVAATLALGFRS 154

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ ++I R  L ++  GQMEAA ++G++  +A R V+ PQA+R  +P   +++  +LK+
Sbjct: 155 AAYQSQIFRGALQSIDEGQMEAARSIGMSRLEAIRHVIAPQALRRSVPGFQNEFTIVLKD 214

Query: 338 SSLAVAVGFADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +S+A A+G A+L+     +   QT   +E+I+    +Y  L+      ++ +N + A+
Sbjct: 215 TSIAFAIGLAELLKRSEDLFTQQTTAILEVIVFISLLYFVLTFTTNRTLDYVNNRFAI 272


>gi|295700417|ref|YP_003608310.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Burkholderia sp. CCGE1002]
 gi|295439630|gb|ADG18799.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. CCGE1002]
          Length = 219

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 91/223 (40%), Gaps = 14/223 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L        T  ++ +   VL +V++  A  L R       +AL   YI  F   
Sbjct: 3   HWSGYLELILQGARTTVELTLMGAVLALVMAFVAG-LGRLSRFFVVRALATSYIEFF--R 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G    V +   Y           F             +  +AL     A+ AE+VR  + 
Sbjct: 60  GTSIFVQLFWAY-----------FVLPMAGLTLTPLQAGVLALGLNVGAYGAEVVRGAVA 108

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+   Q  A IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+ 
Sbjct: 109 AIGHEQRSACIALNLSRYQRMRHVILPQALPLMLPTFGNNAIELLKGTAVVSLISLGDMT 168

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                + +QTG  +      + +Y  ++ +I+  M +L ++++
Sbjct: 169 FQAQVVRSQTGNTLIPFATILALYFGMACLISFGMRKLESRMS 211



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 3/142 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  L   G + A ++  + G GRLS   +V  +   Y+E FR     V 
Sbjct: 7   YLELILQGARTTVELTLMGAVLALVMAFVAGLGRLSRFFVVRALATSYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F+   +   +         L  G+      +      +   A   +        ++L  
Sbjct: 67  LFW---AYFVLPMAGLTLTPLQAGVLALGLNVGAYGAEVVRGAVAAIGHEQRSACIALNL 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
           +R  R  H    +ALPL+  + 
Sbjct: 124 SRYQRMRHVILPQALPLMLPTF 145


>gi|16761278|ref|NP_456895.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765680|ref|NP_461295.1| histidine/lysine/arginine/ornithine transport protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|29141026|ref|NP_804368.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56412750|ref|YP_149825.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62180924|ref|YP_217341.1| lysine/arginine/ornithine ABC transporter [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161612914|ref|YP_001586879.1| hypothetical protein SPAB_00620 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549642|ref|ZP_02343401.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167993040|ref|ZP_02574135.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237377|ref|ZP_02662435.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242477|ref|ZP_02667409.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261625|ref|ZP_02683598.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168465938|ref|ZP_02699808.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194445801|ref|YP_002041616.1| histidine ABC transporter permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450619|ref|YP_002046408.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194736324|ref|YP_002115423.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197264105|ref|ZP_03164179.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197361684|ref|YP_002141320.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198243854|ref|YP_002216425.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388297|ref|ZP_03214909.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204928994|ref|ZP_03220137.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|207857771|ref|YP_002244422.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213426991|ref|ZP_03359741.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213581828|ref|ZP_03363654.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213612823|ref|ZP_03370649.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213649621|ref|ZP_03379674.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213852675|ref|ZP_03382207.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|224583159|ref|YP_002636957.1| histidine transport system permease [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238912367|ref|ZP_04656204.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289827474|ref|ZP_06546086.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|61225733|sp|P0A2I9|HISQ_SALTY RecName: Full=Histidine transport system permease protein hisQ
 gi|61225734|sp|P0A2J0|HISQ_SALTI RecName: Full=Histidine transport system permease protein hisQ
 gi|25296629|pir||AG0800 histidine transport system permease protein STY2583 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|47732|emb|CAA24660.1| unnamed protein product [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|154126|gb|AAA75579.1| Q protein [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420895|gb|AAL21254.1| histidine and lysine/arginine/ornithine transport system
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|16503577|emb|CAD07585.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 gi|29136651|gb|AAO68217.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|56127007|gb|AAV76513.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62128557|gb|AAX66260.1| ABC superfamily (membrane),histidine and lysine/arginine/ornithine
           transport system [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161362278|gb|ABX66046.1| hypothetical protein SPAB_00620 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404464|gb|ACF64686.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194408923|gb|ACF69142.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194711826|gb|ACF91047.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631271|gb|EDX49831.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197093160|emb|CAR58604.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|197242360|gb|EDY24980.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289601|gb|EDY28964.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197938370|gb|ACH75703.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199605395|gb|EDZ03940.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321538|gb|EDZ06737.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205325459|gb|EDZ13298.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205328791|gb|EDZ15555.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205338316|gb|EDZ25080.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205349591|gb|EDZ36222.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709574|emb|CAR33919.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|224467686|gb|ACN45516.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|261247559|emb|CBG25386.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. D23580]
 gi|267994453|gb|ACY89338.1| histidine/lysine/arginine/ornithine transport protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158911|emb|CBW18424.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. SL1344]
 gi|312913344|dbj|BAJ37318.1| histidine ABC transporter permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321222946|gb|EFX48017.1| Histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322617098|gb|EFY14004.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322617596|gb|EFY14495.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322624774|gb|EFY21603.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322630324|gb|EFY27094.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322634504|gb|EFY31237.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322639215|gb|EFY35907.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322640078|gb|EFY36745.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322645702|gb|EFY42226.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652066|gb|EFY48429.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656238|gb|EFY52535.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659390|gb|EFY55637.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322665850|gb|EFY62033.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669911|gb|EFY66052.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673896|gb|EFY69993.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322678655|gb|EFY74711.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322683550|gb|EFY79564.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322687625|gb|EFY83595.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322715402|gb|EFZ06973.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323130684|gb|ADX18114.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323193540|gb|EFZ78745.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323198447|gb|EFZ83549.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204559|gb|EFZ89562.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208503|gb|EFZ93442.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323213641|gb|EFZ98430.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323218324|gb|EGA03034.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222921|gb|EGA07270.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224504|gb|EGA08786.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323232319|gb|EGA16422.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323235647|gb|EGA19731.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323241193|gb|EGA25229.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323244935|gb|EGA28937.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323250054|gb|EGA33948.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323253838|gb|EGA37663.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323254975|gb|EGA38766.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323259838|gb|EGA43470.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323264141|gb|EGA47648.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323270839|gb|EGA54277.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326624177|gb|EGE30522.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|223501|prf||0809313C protein hisQ
          Length = 228

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGLVG-AGAKLSQNRVTGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +   +           ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            TH +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +    +LS N++   I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|86136436|ref|ZP_01055015.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85827310|gb|EAQ47506.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 248

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I + +F +G+++ LF     + +     +   LL I T +I  +P LVLI + Y +  
Sbjct: 34  LQIALGAFGMGLIIGLFG-AYGKLYGGPILRD--LLAIYTTVIRAVPELVLILILYYVGT 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G       ++    L     A+  EI+R  + AVP GQ+EAA A G+ 
Sbjct: 91  DLINKLAQTMGYGRVEISGVVAGIWVLGIVQGAYATEILRGAIQAVPPGQIEAARAYGMP 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M    P L + +L   K+++L   VGF +L        + T      
Sbjct: 151 ALMTMRRVTIPAMMAFATPGLANLWLIATKDTALLAVVGFNELTLETKQAASSTRAYFTF 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L    +YL +++       R+  
Sbjct: 211 FLAAGGLYLMVTLCSGAVFARIEK 234



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 25/177 (14%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           + + +L G  N+  +A        IIG     G+L    ++  +  +Y  V R +P LV+
Sbjct: 22  WGSNLLRGLANSLQIALGAFGMGLIIGLFGAYGKLYGGPILRDLLAIYTTVIRAVPELVL 81

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-VLSLF 203
           I  LY                          L           ++ +   V GI VL + 
Sbjct: 82  ILILYYVGT---------------------DLINKLAQTMGYGRVEISGVVAGIWVLGIV 120

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---ALKYQLHFDKPVLGQFNFI 257
               +        +A+P   I     +G+P L+ +    +   + F  P L     I
Sbjct: 121 QGAYATEILRGAIQAVPPGQIEAARAYGMPALMTMRRVTIPAMMAFATPGLANLWLI 177


>gi|315303607|ref|ZP_07874151.1| probable amino-acid ABC transporter permease protein YckA [Listeria
           ivanovii FSL F6-596]
 gi|313628027|gb|EFR96616.1| probable amino-acid ABC transporter permease protein YckA [Listeria
           ivanovii FSL F6-596]
          Length = 213

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   V S  LG V+++           K      +L I  +++ G P L
Sbjct: 12  LDGVKTTLLVFAVTLVCSIPLGAVVAVGNVS-------KIAPLKFILNIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y   +  P++          V     ++++A     AA+ AEI R G +++  G
Sbjct: 65  LQLIFIY---YGLPII--------GIVFDRMDAVFLAFILNYAAYFAEIFRGGFLSIESG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 114 QYESAKVLGLTYAQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKI 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 174 AMSRDVTLIPLVLVAA-IYLALTAILTVLFKQLEKRFS 210



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGVKTTLLVFAVTLVCSIPLGAVVAVGNVSKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGIVFDRMDAVFLAFILNY 95


>gi|224367458|ref|YP_002601621.1| GlnP1 [Desulfobacterium autotrophicum HRM2]
 gi|223690174|gb|ACN13457.1| GlnP1 [Desulfobacterium autotrophicum HRM2]
          Length = 221

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S + G+V+ + A  + R F  KT   +   Y + F   G P +V +   + L+F
Sbjct: 24  LLLIVPSALGGVVIGITAGAI-RAFGSKTSARIGDGYAALF--RGTPLVVQL---FVLYF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +G +           + +        + A+ +E VR  L+++ + Q  AA ALG T
Sbjct: 78  GLPNIGIYF--------SPYWAAVTGFILCSGAYQSEYVRGALLSIRKNQYLAAEALGFT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V++PQAMR  +P   ++ + L+K SSLA  V F +L   G TI  +  +  E+
Sbjct: 130 RIQTLVWVIIPQAMRRALPGCGNEIVYLIKYSSLAYVVTFMELTGEGKTIATEYFRFTEV 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            L+    YL L  +  + + +    + +
Sbjct: 190 FLVIGCYYLVLVSLAKIILRKAEQALHV 217


>gi|186471954|ref|YP_001863272.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184198263|gb|ACC76226.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 243

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 8/215 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRH------FHEKTGKALPLLYISTFLIFGLPTLVLI 238
             A   V + +LG  L+L     SR        +    +  PLL    F  FG  TL+  
Sbjct: 23  LCACAIVTATLLGFALALARNARSRVVARAASLYVLVFRNSPLLVQLLFWYFGAATLLPR 82

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           ++   L  + P          +    EF++ ++ L+CY   F+ E  R+G+  V  GQ  
Sbjct: 83  SMMEWL--NAPHAISLGVFTLAWPPFEFVAGWVGLTCYATTFVGEEFRAGIRGVASGQHR 140

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGLT     R V+LPQA+R   PPL  QY+N++KNSSL +A+G A+L      I  
Sbjct: 141 AAAALGLTPFATFRHVILPQAIRIATPPLAGQYMNIVKNSSLTMAIGLAELSYTSRQIDT 200

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +T +  +       +Y++    I + +     + A
Sbjct: 201 ETFKTFQAFGAATVLYIATIAAIEVALLLWQHRSA 235



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 8/115 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF  T  L    ++ AT++G  +   R + +++VA    +YV VFRN P LV 
Sbjct: 9   YVAWLAHGFGLTLLLCACAIVTATLLGFALALARNARSRVVARAASLYVLVFRNSPLLVQ 68

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           + F Y          ++  L  P    +  F +           + +   A  FV
Sbjct: 69  LLFWYFGAATLLPRSMMEWLNAPHAISLGVFTLAWPPFEFVAGWVGLTCYATTFV 123


>gi|71737879|ref|YP_273293.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482032|ref|ZP_05636073.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|71558432|gb|AAZ37643.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320325714|gb|EFW81775.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327367|gb|EFW83381.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330881565|gb|EGH15714.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330887840|gb|EGH20501.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|331008890|gb|EGH88946.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 277

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 16/256 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
             +    ++          D  + +      N  GL          A + +F  +  IV+
Sbjct: 28  LYLTWLVMFALFAGFFLSFDLKLAIILDKLPNLIGLHLAPNGFLQGAALTLFVSLCSIVV 87

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           S+   F T L+R         +   Y S F    L          Q+      L Q   +
Sbjct: 88  SVLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLI--------QILLIYLGLPQLGIV 139

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G+       +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LP
Sbjct: 140 PGAI-----TAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLP 194

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +
Sbjct: 195 QAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIM 254

Query: 378 SIMIALFMNRLNAKIA 393
           SI + L  +RL     
Sbjct: 255 SIGLELLQSRLERHYG 270



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +++   ++ + ++G +    RLS++ +   I   Y   FR  P L+ I  +
Sbjct: 70  FLQGAALTLFVSLCSIVVSVLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLI 129

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +  +P         + LN 
Sbjct: 130 YLGLPQLGIVPGAITAGVIALSLNY 154


>gi|327479740|gb|AEA83050.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas stutzeri DSM 4166]
          Length = 365

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 16/229 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           L     +      + V    +GI  +L       L R       + L + +I  +    L
Sbjct: 147 LQTVPTSQWGGLMLTVVIAAVGIAGALPLGILLALGRRSDMPAIRVLCVTFIEFWRGVPL 206

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            T VL      L    P     +         + +   + +  + AA+IAE+VR GL A+
Sbjct: 207 IT-VLFMSSVMLPLFLPEGMNLD---------KLLRAMLMVVFFEAAYIAEVVRGGLQAI 256

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA A+GL + ++T LV+LPQA++ +IP + + ++ L K++SL + +G  D ++ 
Sbjct: 257 PKGQYEAAAAMGLGYWRSTLLVILPQALKLVIPGIVNTFIALFKDTSLVIIIGLFDFLNS 316

Query: 353 GGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                      G + E  +    +Y      ++ +  RL  K+    K+
Sbjct: 317 IKRATADPAWLGMSTEGYVFAALVYWMFCFGMSRYSMRLERKLDTGHKR 365


>gi|241554153|ref|YP_002979366.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863459|gb|ACS61121.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 235

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 2/172 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+         +PTLV + L Y   F    +        +  + E +   I L    AA
Sbjct: 57  PLVAAYVSYHRNVPTLVQLMLWYFGIFTL--MPSGVAEWLAVHNAEAIFAVIGLGLCQAA 114

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + +E +RSG+ +V  GQM+AA ALG  +  A R V++PQ +R+ +PPL +  ++L KNSS
Sbjct: 115 YFSEDLRSGVRSVSPGQMQAARALGHGYVSAMRFVIMPQGVRNALPPLINHSVSLFKNSS 174

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LAV +G ++L      I N + +  EI LI   +YL  S++I      L+ +
Sbjct: 175 LAVVIGASELTHAVKEIENLSFRTFEIYLIGTVLYLFFSLVIMSIGAYLSMR 226


>gi|150396799|ref|YP_001327266.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150028314|gb|ABR60431.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 276

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 7/215 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               +   S ++G V+SL    L R    +    L   Y+  F   G P +  + L Y  
Sbjct: 68  VTLTLVTASILMGAVVSL-PVALGRMSKNRLWGWLAYAYVYFF--RGTPLITQLFLIYYG 124

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L   +P L              +       +  TAA+ AEI+R  + +VPRGQ E A AL
Sbjct: 125 LGSFRPQLETVGLWW--FFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQREGAAAL 182

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL  R A   V+LPQAM   + P  ++ + ++K S++   V   DL+       ++T   
Sbjct: 183 GLPDRIAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTFDY 242

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++ +    +YL +  ++      L A++    K+
Sbjct: 243 -QMYIWAAILYLLMVELLRNVWGWLEARLTRHLKR 276



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 40/97 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S YA   L G   T  L  + ++   ++   V  GR+S N+L  W+   YV  FR  P +
Sbjct: 56  SRYAPNFLSGLGVTLTLVTASILMGAVVSLPVALGRMSKNRLWGWLAYAYVYFFRGTPLI 115

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
             +F +Y  + S  P  +   +  F     N  L   
Sbjct: 116 TQLFLIYYGLGSFRPQLETVGLWWFFRDAWNCALFTF 152


>gi|56962685|ref|YP_174411.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
 gi|56908923|dbj|BAD63450.1| amino acid ABC transporter permease [Bacillus clausii KSM-K16]
          Length = 223

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 17/221 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            + F    ++   ++F+   V+   ++L A  L R       +++  +++  F   G   
Sbjct: 8   FMPFILKGLEITVQVFLVGAVVAYSIALVAG-LMRTSKNPVIRSVAAVFVELF--RGTSL 64

Query: 235 LVLIAL-KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           LV +    Y L    P L   NF+ GS          IA+     A+ +E+VR  + ++ 
Sbjct: 65  LVQMFFFVYALPMIFPGLSMSNFLAGS----------IAVGLNYGAYASEVVRGAIHSIA 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAAI+L ++  +  RLV+LPQA+R ++P   +  + LLK +SL   +  AD+    
Sbjct: 115 VGQTEAAISLNMSKWQRMRLVILPQAVRLMLPGFGNNAIELLKGTSLVYFIALADMTFQA 174

Query: 354 GTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +          IEI    +  Y  L++ +      L  +
Sbjct: 175 NVLRGSNNSLSNQIEIYTYLLVAYFILALPLIFLARWLEKR 215



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 41/91 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + + SS+   IL G   T  +   G + A  I  + G  R S N ++  +  V+VE+FR 
Sbjct: 2   FNNFSSFMPFILKGLEITVQVFLVGAVVAYSIALVAGLMRTSKNPVIRSVAAVFVELFRG 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
              LV +FF   ++  + P    S  L   +
Sbjct: 62  TSLLVQMFFFVYALPMIFPGLSMSNFLAGSI 92


>gi|330879703|gb|EGH13852.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 232

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNVICDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S   P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFFWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|161504172|ref|YP_001571284.1| hypothetical protein SARI_02279 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865519|gb|ABX22142.1| hypothetical protein SARI_02279 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 246

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       +          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQEAPFGNTTYLGWIWSGFQVTVALSITAWIIAFLIGSIFGILRTVPNRFLSGL 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GALYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M+ +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMSLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I  GF  T  L+ +  I A +IG++ G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTTYLGWIWSGFQVTVALSITAWIIAFLIGSIFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  V  +LP 
Sbjct: 53  LRTVPNRFLSGLGALYVELFRNVPLIVQFFTWYLVVPELLPE 94


>gi|92112257|ref|YP_572185.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795347|gb|ABE57486.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 369

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 24/276 (8%)

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+AW+    V   R    + VI F   + + +L            +++  R      LT+
Sbjct: 113 LLAWLAIPRVPGKRWAAVIAVIGFPIAAYVLLLGGH------FGLIYVPTREWGGLMLTL 166

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  V S  +GIVL+L      R  +    +A+ +++I  +    L T VL      
Sbjct: 167 TVATIGIVGSLPIGIVLAL-----GRRSNLPFVRAVSVVFIEFWRGVPLIT-VLFMASVM 220

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P   +F+         + +   + +  + +A++AE+VR GL A+P GQ EA  AL
Sbjct: 221 LPLFVPTQVEFD---------KLLRALVGIMLFWSAYMAEVVRGGLQAIPSGQDEAGKAL 271

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQT 360
           GL + +   L++LPQA++ +IP + + ++ L K++SL + +G  DL+     G T  +  
Sbjct: 272 GLGYWQRMGLIVLPQALKLVIPGIVNTFIALFKDTSLVLIIGLFDLLAIIRAGLTDSDWL 331

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G A E  +    ++      ++ +   +  ++    
Sbjct: 332 GFATEGYVFAALVFWVFCFSMSRYSQYIERRLQTGH 367


>gi|330988581|gb|EGH86684.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 277

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 16/256 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
             +    ++          D  + +      N  GL          A + +F  +  IV+
Sbjct: 28  LYLTWLVMFVLFAGFFLSFDLKLAIILDKLPNLIGLHLAPNGFLQGAALTLFVSLCSIVV 87

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           S+   F T L+R         +   Y S F    L          Q+      L Q   +
Sbjct: 88  SVLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLI--------QILLIYLGLPQLGIV 139

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
            G+       +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LP
Sbjct: 140 PGAI-----TAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIFWRVTLP 194

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +
Sbjct: 195 QAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIM 254

Query: 378 SIMIALFMNRLNAKIA 393
           SI + L  +RL     
Sbjct: 255 SIGLELLQSRLERHYG 270



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T +++   ++ + ++G +    RLS++ +   I   Y   FR  P L+ I  +
Sbjct: 70  FLQGAALTLFVSLCSIVVSVLLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILLI 129

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +  +P         + LN 
Sbjct: 130 YLGLPQLGIVPGAITAGVIALSLNY 154


>gi|315638556|ref|ZP_07893732.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Campylobacter
           upsaliensis JV21]
 gi|315481400|gb|EFU72028.1| His/Glu/Gln/Arg/opine amino acid ABC superfamily ATP binding
           cassette transporter, permease protein [Campylobacter
           upsaliensis JV21]
          Length = 246

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 106/248 (42%), Gaps = 15/248 (6%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +FF    +      P   + +  G  +           M +     + +F    +  +F 
Sbjct: 10  VFFTIIILWGYFSFPYEILQVSEGNEVRYAFTPNAKAYMLSYGVTILLTFCAVCIGLVFG 69

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             L+       G    ++     +I G P ++ + +   + F              T   
Sbjct: 70  FILALIRFSPFGVLNFIVDEFIDIIRGTPVILQLMIFAFVIF--------------TFLD 115

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++   R ++LPQA+++I+
Sbjct: 116 NLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYQSTMREIILPQALKNIL 175

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +++++L K +S+   +   D+     ++        + I+    +Y     + +L 
Sbjct: 176 PALANEFISLFKETSVVGFISVVDITMQSKSLQAVLYNP-KPIIFTGLVYYVSVKIFSLG 234

Query: 385 MNRLNAKI 392
           +  L  ++
Sbjct: 235 VRLLEKRL 242



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 29/70 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
             A A ++ +  T  L F  +    + G ++   R S   ++ +I   ++++ R  P ++
Sbjct: 42  PNAKAYMLSYGVTILLTFCAVCIGLVFGFILALIRFSPFGVLNFIVDEFIDIIRGTPVIL 101

Query: 144 VIFFLYKSVL 153
            +      + 
Sbjct: 102 QLMIFAFVIF 111


>gi|269139979|ref|YP_003296680.1| glutamate-aspartate transport system permease [Edwardsiella tarda
           EIB202]
 gi|267985640|gb|ACY85469.1| glutamate-aspartate transport system permease [Edwardsiella tarda
           EIB202]
 gi|304559812|gb|ADM42476.1| Glutamate Aspartate transport system permease protein GltK
           [Edwardsiella tarda FL6-60]
          Length = 225

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 66/231 (28%), Positives = 112/231 (48%), Gaps = 6/231 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI + + V+GI+       + R    K    L  LY
Sbjct: 1   MYAFDWSSIAPSLPYLLDGMVITLKITLTAVVVGILWGTLL-AVMRLSRWKPLAWLAALY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P L Q             +S  +A + + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSLLQRFLGLSPQSDIRLISAMVAFALFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +V RGQ  AA+ALG+T  ++  LV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIKSVARGQNAAALALGMTPWQSLYLVVLPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  + AL
Sbjct: 175 LSLADFFRTASTIGERDGTQLEMILFAGAVYFIISLSASLLVSHLKKRSAL 225



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 44/78 (56%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S +     +L G V T  +  + ++   + GTL+   RLS  K +AW+  +YV +FR
Sbjct: 5   DWSSIAPSLPYLLDGMVITLKITLTAVVVGILWGTLLAVMRLSRWKPLAWLAALYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S+
Sbjct: 65  SVPLVMVLLWFYLVVPSL 82


>gi|149191455|ref|ZP_01869705.1| Putative arginine ABC transporter, permease protein [Vibrio
           shilonii AK1]
 gi|148834724|gb|EDL51711.1| Putative arginine ABC transporter, permease protein [Vibrio
           shilonii AK1]
          Length = 223

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++ V + ++G +L+L  T        +T     L      L  
Sbjct: 1   MNQQHVWQMVDGLQTSLQLTVVALIVGCLLALLMTL---SLILRTPVVHWLTRGIITLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y       V+ + +F+      P F    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFEVIRE-SFLWTWLSQPWF-CAMLALALNTAAYSTQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+   KAT  VLLP A+R  IP  +++ + + K +SLA  +   D++
Sbjct: 116 AIPSGQWQACRALGMD-MKATLRVLLPFAIRRAIPAYSNEVILVFKGTSLASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  +    YL ++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLVVFSVAGLFYLGVNGILTLIFRQVEKK 215


>gi|56708860|ref|YP_164901.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56680545|gb|AAV97210.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 250

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 3/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I   +F  G+V+ LF     + +     +   LL I T ++  +P LVLI + Y +  
Sbjct: 36  LQIAFGAFGFGLVIGLFG-AYGKLYGGPVVRD--LLAIYTTVVRAVPELVLILILYFVGT 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G        +    L     A+  E++R  ++AVP+GQ+EAA A G+ 
Sbjct: 93  DLINRASEALGYGRVEISGVAAGIWVLGVVQGAYSTEVLRGAILAVPQGQIEAARAFGMP 152

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  +   +P L + +L   K+++L   VGF++L        + T      
Sbjct: 153 PVMLMRRVTIPAMLSFALPGLANLWLIATKDTALLAVVGFSELTLETRQAASSTRAYFTF 212

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
            L    +YL +++M +     L  +
Sbjct: 213 FLAAGGLYLMVTLMSSALFQLLERR 237


>gi|294810979|ref|ZP_06769622.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294323578|gb|EFG05221.1| amino acid ABC transporter permease protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 279

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 15/200 (7%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +  F LG+VL L    L R       +    +YI  F       L+ I +   +    P
Sbjct: 80  TLSGFALGLVLGLVV-ALMRLSSVAPYRWAATVYIEFFRGLPA-LLIFIFVGVAVPLAFP 137

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                   G       +  + + L    AA+IAE +R+G+ AVPRGQ+EAA +LG +H +
Sbjct: 138 --------GTEIPGGTYGKVALGLGLVAAAYIAETIRAGIQAVPRGQLEAARSLGFSHAR 189

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIE 365
           A   V++PQA R ++PPLT++ + L K+SSL + +G      +L   G  + +Q+  +  
Sbjct: 190 AMVSVIIPQAFRIVVPPLTNELVLLFKDSSLVLFLGVTLEERELTKFGRDLASQSANSTP 249

Query: 366 IILIWMFIYLSLSIMIALFM 385
           I L+    YL +++ + L +
Sbjct: 250 I-LVAGVCYLLVTVPLGLVV 268



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 32/69 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + V   NT     SG     ++G +V   RLS+     W   VY+E FR +P L++  F+
Sbjct: 69  LTVALRNTVLYTLSGFALGLVLGLVVALMRLSSVAPYRWAATVYIEFFRGLPALLIFIFV 128

Query: 149 YKSVLSVLP 157
             +V    P
Sbjct: 129 GVAVPLAFP 137


>gi|220904828|ref|YP_002480140.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219869127|gb|ACL49462.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 249

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 5/227 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F N   L++      T A +FV ++++  ++  F   L R    K  + +   Y++ F  
Sbjct: 16  FGNVTYLNWLIDGFLTTAALFVCAWIVAFIVGSFFGIL-RTLPSKALRTVGATYVAIF-- 72

Query: 230 FGLPTLVLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSL-YIALSCYTAAFIAEIVRS 287
             +P +V   + Y    D  P      F      + +F  L   AL  +T A + E VRS
Sbjct: 73  RNIPLIVQFFIWYLAAPDLLPRDISVWFKSELNPNAQFFILSTCALGLFTGARVCEQVRS 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++A+ RGQ  A +ALGLT  +    VLLP A R I PPLTS+ LN++KN+++A  +G  
Sbjct: 133 GILALSRGQRYAGLALGLTLPQTYVHVLLPNAYRIITPPLTSEMLNMVKNTAVASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L S    ++  +G A E  +     Y+ L+ ++   M  L  K+ L
Sbjct: 193 ELTSQANRLLEFSGFAYESFIAVTLAYVFLNFIVMRAMKMLEKKMRL 239



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 37/75 (49%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++ GF+ T  L     I A I+G+  G  R   +K +  +   YV +FRNIP +V
Sbjct: 20  TYLNWLIDGFLTTAALFVCAWIVAFIVGSFFGILRTLPSKALRTVGATYVAIFRNIPLIV 79

Query: 144 VIFFLYKSVLSVLPI 158
             F  Y +   +LP 
Sbjct: 80  QFFIWYLAAPDLLPR 94


>gi|170743615|ref|YP_001772270.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168197889|gb|ACA19836.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 248

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 89/228 (39%), Gaps = 4/228 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F +F +            T   +  +S  L +V+ +     ++    +T +     YI
Sbjct: 18  WNFNIFYDPYEYGRFIAGASTTLWLIAWSLALSLVIGVLG-AWAQGARSRTLRWGVDAYI 76

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F         +  L + L                 +        IAL  +  AF  EI
Sbjct: 77  QAFRNTPPM---IQLLFFYLGLGAFTPEIDMGGYSQPLISSLAWAVIALGIFGGAFNVEI 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ AVP   +EAA +L  +  +    V LP A R  +P LT+  ++L K +SLA  +
Sbjct: 134 FRAGIEAVPDSTLEAAESLCFSRFQTYIYVTLPLAFRISLPALTNNLVSLAKTTSLAYII 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              ++  V   + +      E++L+    Y+ +  ++A  ++ +  ++
Sbjct: 194 TVPEMTYVLNQVWSDNLNTSEMMLVLFGFYIVVVTLLAAGLHAVERRL 241



 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 5/104 (4%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +      L +R G+  +    PY     Y    + G   T WL    +  + +IG L   
Sbjct: 5   IGPFFRSLYDRTGWNFNIFYDPYE----YGR-FIAGASTTLWLIAWSLALSLVIGVLGAW 59

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
            + + ++ + W    Y++ FRN PP++ + F Y  + +  P  D
Sbjct: 60  AQGARSRTLRWGVDAYIQAFRNTPPMIQLLFFYLGLGAFTPEID 103


>gi|170721983|ref|YP_001749671.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169759986|gb|ACA73302.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 236

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 4/186 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + L   YI  F   G P L  + L Y          Q   +        ++ 
Sbjct: 52  RMSRNLPLQRLAAGYIYFF--RGSPLLAQLFLLYYGLGSLKEFWQDVGLWW-FFREAWLC 108

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +A +  TAA+ AEI+R  L+AV  GQ EAA AL L        V+LPQ++   I PL 
Sbjct: 109 TLLAFTLNTAAYQAEILRGSLMAVAPGQYEAARALNLKRSTTFFKVILPQSLLVAIGPLG 168

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ + ++K S++A  V   DL+ V     +++    +I L    +YL +  ++   +  L
Sbjct: 169 NELILMIKASAIASLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHL 227

Query: 389 NAKIAL 394
            A++  
Sbjct: 228 EARLGR 233



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 61/200 (30%), Gaps = 7/200 (3%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    + G + T  L         ++G L+   R+S N  +  +   Y+  FR  P L
Sbjct: 17  ERYGPRFIDGLLVTAKLVAISFTLGAVLGLLLALARMSRNLPLQRLAAGYIYFFRGSPLL 76

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
             +F LY  + S+        +  F        L   TL         +   ++ +    
Sbjct: 77  AQLFLLYYGLGSLKEFWQDVGLWWFFREAWLCTLLAFTLNTAAYQAEILRGSLMAVAPGQ 136

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGL--PTLVLIALKYQLH-----FDKPVLGQFN 255
           +    + +    T     +L  S  +  G     L+L+     +      +D   + +  
Sbjct: 137 YEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVTKLA 196

Query: 256 FIGGSTVSPEFMSLYIALSC 275
           F           +  + L  
Sbjct: 197 FSRSFDFQIYLWAAVLYLVI 216


>gi|307138973|ref|ZP_07498329.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli H736]
 gi|331642947|ref|ZP_08344082.1| histidine transport system permease protein HisQ [Escherichia coli
           H736]
 gi|331039745|gb|EGI11965.1| histidine transport system permease protein HisQ [Escherichia coli
           H736]
          Length = 228

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 9/229 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L    +T++      V + ++G++++      +R           +    T LI 
Sbjct: 5   FSGVILQGALVTLELAISSVVLAVIIGLIVAGGKLSQNRLSGL-------IFEGYTTLIR 57

Query: 231 GLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           G+P LVL+ L +  L      + +   +G   + P  ++  I L     A+  E  R   
Sbjct: 58  GVPDLVLMLLIFYGLQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAF 116

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+
Sbjct: 117 MAVPKGHIEAATAFGFTRGQVFRRIMFPSMMRYALPGIGNNWQVILKSTALVSLLGLEDV 176

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V         T +     ++   IYL  + +    +  L  + ++  K+
Sbjct: 177 VKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +V  G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIVAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|227529679|ref|ZP_03959728.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350469|gb|EEJ40760.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 227

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 19/239 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                   + L +   +    +    LT+       + S  LGI++SL  T   +     
Sbjct: 5   FEIQGGFKMSLNYVSQILPSLIQGAGLTLQIFFWTLIVSIPLGIIVSLGLTSKVKPLKW- 63

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
                 +L I  +L+ G P L+ +   +   +  P++          V   + +  +A  
Sbjct: 64  ------ILEIYVWLMRGTPLLLQLIFVF---YGLPII--------GIVFQRYDAALVAFI 106

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ AEI R G  +V  GQ EAA  L L + +  R +++PQ ++ +IP + ++ +NL
Sbjct: 107 LNYAAYFAEIFRGGFQSVSVGQYEAAKVLRLNYWQTVRKIIIPQVVKIVIPSIGNEVINL 166

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +K+SSL   +G  DL+  G    ++    I  +L+   IYL L  +  L + ++  + +
Sbjct: 167 VKDSSLVYVIGLGDLLRAGNVATSRDVTLIP-LLLVGLIYLILVGICTLVLRQVEKRYS 224



 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S    +++ G   T  + F  +I +  +G +V  G  S  K + WI  +YV + R  P L
Sbjct: 19  SQILPSLIQGAGLTLQIFFWTLIVSIPLGIIVSLGLTSKVKPLKWILEIYVWLMRGTPLL 78

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           + + F++  +  +  +            LN              +   
Sbjct: 79  LQLIFVFYGLPIIGIVFQRYDAALVAFILNYAAYFAEIFRGGFQSVSV 126


>gi|186473900|ref|YP_001861242.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196232|gb|ACC74196.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 216

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 14/227 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +  +G             I +   V+G  + +     +R       +     Y+ 
Sbjct: 1   MFSAHVFAQGFPLLLQAALATIGISLTGLVIGFFVGIGVCS-ARLSSNFVAQRFGGAYVF 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F                +     ++       G  VSP  ++   A+S  +A++IAEI+
Sbjct: 60  FFR------------GVPMLVQLLLVYYLLPFVGINVSP-IVAAISAVSLCSASYIAEIL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G + +P GQ+EAA  LGL+     R + +PQA R  +P L ++ + L+K SSL   VG
Sbjct: 107 RGGFMNIPPGQIEAARMLGLSPLDMLRRIQVPQAFRMTLPSLVNEMVLLIKASSLISVVG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            A++      I   T + +E  L    IY  +   +AL  +    ++
Sbjct: 167 VAEITRTAQNIAASTYRPLEAYLAAGLIYFVICGALALVAHAAEHRL 213


>gi|148255316|ref|YP_001239901.1| putative amino acid ABC transporter permease [Bradyrhizobium sp.
           BTAi1]
 gi|146407489|gb|ABQ35995.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 506

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 126/329 (38%), Gaps = 14/329 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW----ICRVYVEVFRN 138
            +   A++ G  N   +     +   ++  L+G         + W    +   +  V+ +
Sbjct: 179 DTAGNALVRGGANLPVVGMLMWLLGKLV-VLIGMLASLLIWPLVWVRDQLQASHQPVWTD 237

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +    ++      V+        S+V     F     +            I       G+
Sbjct: 238 LALTAIVVTALVFVIGGGSRALRSVVATAATFAGIALVIAIMGLDRGGLPIVDTRLWGGM 297

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL----GQF 254
           +++L  + +        G AL L   ST  +  L ++  I L   +     +        
Sbjct: 298 LVTLVVSVIGIVASMPIGIALALGRRSTIPLIRLFSIAFIELVRGVPLITVLFFATYMLP 357

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            F+ G+      +   + ++ ++ A++AE++R GL A+PRGQ EAA ALGL+  K T  +
Sbjct: 358 LFLPGNMRIDGLVRALVGVALFSGAYMAEVIRGGLQAIPRGQAEAASALGLSWWKTTSFI 417

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-----GGTIINQTGQAIEIILI 369
           +LPQA+R +IP + + +++L K++SL   V   DL+          +      A      
Sbjct: 418 VLPQALRHVIPGIVNSFISLFKDTSLVSIVALFDLLGSLKASFADPVWATPTTAFTGFAF 477

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              IY      ++ +   +  ++    + 
Sbjct: 478 TGLIYFVFCFGMSRYSLLVERRLNAHRRH 506


>gi|167914634|ref|ZP_02501725.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 112]
 gi|217419115|ref|ZP_03450622.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 576]
 gi|217398419|gb|EEC38434.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 576]
          Length = 229

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   K+ V S    +VL L     ++    +   ++   Y  T LI  +P LVL+ 
Sbjct: 11  WAGTIETVKLAVLSLAASLVLGLAGAA-AKLSSNRALASVGTFY--TTLIRAVPDLVLML 67

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                       F++  + L     A+  E  R   +AVPRGQ+EA
Sbjct: 68  LLFYGIQILLNDVTDMLGAEQIDIDPFVAGIVTLGFIYGAYFTETFRGAFLAVPRGQLEA 127

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A G+   +    ++  Q MR  +P + + +  L+K ++L   +G AD+V         
Sbjct: 128 GFAYGMGAWRVFARIMFAQMMRFALPGIGNNWQVLVKATALVSIIGLADVVKAAQDAGKS 187

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       L    IYL+++ +  L +  L  + +   ++
Sbjct: 188 TLNFFFFTLAAGAIYLAITTLSNLVLMYLEKRYSAGVRR 226


>gi|16759615|ref|NP_455232.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29142612|ref|NP_805954.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|62179261|ref|YP_215678.1| glutamate/aspartate ABC transporter [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161615119|ref|YP_001589084.1| hypothetical protein SPAB_02887 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168236650|ref|ZP_02661708.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168264404|ref|ZP_02686377.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|194738377|ref|YP_002113774.1| glutamate/aspartate ABC transporter permease GltK [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|207856128|ref|YP_002242779.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213052444|ref|ZP_03345322.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213425080|ref|ZP_03357830.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213609635|ref|ZP_03369461.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213852459|ref|ZP_03381991.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|238911614|ref|ZP_04655451.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|289823919|ref|ZP_06543519.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|25296623|pir||AD0583 glutamate/aspartate transport system permease protein GltK STY0708
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|16501907|emb|CAD05134.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29138243|gb|AAO69814.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|62126894|gb|AAX64597.1| ABC superfamily (membrane), glutamate/aspartate transporter
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364483|gb|ABX68251.1| hypothetical protein SPAB_02887 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194713879|gb|ACF93100.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290346|gb|EDY29702.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|205347092|gb|EDZ33723.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206707931|emb|CAR32220.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|322613211|gb|EFY10154.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322621279|gb|EFY18136.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322623699|gb|EFY20537.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322628971|gb|EFY25750.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322631693|gb|EFY28447.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322637571|gb|EFY34273.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322641911|gb|EFY38541.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322646755|gb|EFY43261.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322651456|gb|EFY47836.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322653093|gb|EFY49427.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322658813|gb|EFY55068.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322664917|gb|EFY61110.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322668919|gb|EFY65071.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322670575|gb|EFY66708.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322675316|gb|EFY71392.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322682213|gb|EFY78238.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322684958|gb|EFY80955.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|322713727|gb|EFZ05298.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323193984|gb|EFZ79186.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323197924|gb|EFZ83046.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323202029|gb|EFZ87089.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323207162|gb|EFZ92115.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323210931|gb|EFZ95794.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323214311|gb|EFZ99062.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323219284|gb|EGA03775.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323225505|gb|EGA09735.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323231064|gb|EGA15180.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323234104|gb|EGA18193.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323238201|gb|EGA22259.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323242565|gb|EGA26589.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323248458|gb|EGA32392.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251327|gb|EGA35199.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323259255|gb|EGA42898.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323264844|gb|EGA48345.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323272319|gb|EGA55726.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 224

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIIPSLPYLLAGLVITLKITVTAVVVGIVWGTILAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|222081207|ref|YP_002540570.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725886|gb|ACM28975.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 252

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 9/230 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTF 227
           +  +   L       +        + +L I+   FA   S           PLL +  T 
Sbjct: 8   IIHDYWLLLLVGQYPNGPIGGLAATLILSILAIAFAFPFSILLALARLSKSPLLNWPVTA 67

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L++    + L+ L    +F  P++   +        P F+++ + L  Y   F++E+VR 
Sbjct: 68  LVYFTRGVPLLMLILWGYFLVPLMTGADV-------PSFVTMLVTLVVYQGVFLSEVVRG 120

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G++A+  GQ+EAA ALG ++  A R V+LPQA+ ++IP + S  ++ +K+++L   +   
Sbjct: 121 GILALGHGQLEAARALGHSYFGAMRYVVLPQALYNVIPSILSVLVSTIKDTTLGYVINVP 180

Query: 348 DLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           DL      I NQ   Q  ++  I   +Y  +   +    + L  +I  K 
Sbjct: 181 DLTFAANQINNQLLTQPFQVFFILAAVYYVICWSLTQVASVLERRITRKR 230



 Score = 43.8 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L+   +  A     L+   RLS + L+ W     V   R +P L++I + Y  
Sbjct: 28  GLAATLILSILAIAFAFPFSILLALARLSKSPLLNWPVTALVYFTRGVPLLMLILWGYFL 87

Query: 152 VLSV 155
           V  +
Sbjct: 88  VPLM 91


>gi|238787848|ref|ZP_04631645.1| ABC-type amino acid transport system permease component [Yersinia
           frederiksenii ATCC 33641]
 gi|238724191|gb|EEQ15834.1| ABC-type amino acid transport system permease component [Yersinia
           frederiksenii ATCC 33641]
          Length = 248

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   + S + G+  ++  T L        G    +L       
Sbjct: 10  WRYLLWGTFPDGPLGGAALTLLISLMAGVASAILGTILGVLLAMSRGIWSGILAAILGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    +Y  L + + L  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALVYFVLCLTLDLLANALNRRFS 224


>gi|293395143|ref|ZP_06639429.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
 gi|291422320|gb|EFE95563.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein [Serratia odorifera DSM 4582]
          Length = 228

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +L +V+ L      +  H +   ++   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVLLAVVIGLIG-AGGKLSHNRVIASVFGAY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  I L     A+  E  R   +AVPRGQ+EAA A G
Sbjct: 72  LQIALNGVTEALGVAQFDIDPLSAGIITLGFIYGAYFTETFRGAYMAVPRGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FSGGQTFRRILFPAMMRFALPGIGNNWQVILKATALVSILGLNDVVKATQLAGKGTYQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   +YL  + +    +  L  + +L  K+
Sbjct: 192 FYAIVAGAVYLIFTTVSNGVLLWLERRYSLGVKR 225



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I  G + T  LA S ++ A +IG +   G+LS N+++A +   Y  + R +P LV+
Sbjct: 5   YSQLIFEGALVTLELALSSVLLAVVIGLIGAGGKLSHNRVIASVFGAYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|266622948|ref|ZP_06115883.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288865281|gb|EFC97579.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 216

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 11/210 (5%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M  + +IF  + +  + L LF     R       + +   YIS  ++ G P ++ + + Y
Sbjct: 14  MWISIQIFFVTLIFSLPLGLFI-SFGRMSKNPVIRTIVKFYIS--VMRGTPLMLQLMVVY 70

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +       + F      +    + +I      AA+ AEI RSG+ ++P GQ EAA  
Sbjct: 71  FGPY-------YLFKIKVGNNYRLWAAFIGFVINYAAYFAEIYRSGIQSMPVGQYEAAKL 123

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG +  +    ++ PQ M+ I+P +T++ + L+K++SLA  +   ++ +V   + + +  
Sbjct: 124 LGYSKTQTFFRIIFPQVMKRILPSVTNEVITLVKDTSLAFTISVLEMFAVAKALAS-SQT 182

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++   +     Y   ++++A+ M     ++
Sbjct: 183 SLIPFVAAGLFYYIFNLLVAVIMEYAEKRL 212



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 37/98 (37%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   +  + F  +I +  +G  +  GR+S N ++  I + Y+ V R  P ++ +  +Y  
Sbjct: 13  GMWISIQIFFVTLIFSLPLGLFISFGRMSKNPVIRTIVKFYISVMRGTPLMLQLMVVYFG 72

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
              +  I   +    +  F+               + I
Sbjct: 73  PYYLFKIKVGNNYRLWAAFIGFVINYAAYFAEIYRSGI 110


>gi|330833059|ref|YP_004401884.1| amino acid (glutamine) ABC transporter permease [Streptococcus suis
           ST3]
 gi|329307282|gb|AEB81698.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis ST3]
          Length = 213

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 99/232 (42%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +++     + + S  LG V +       +           LL+ 
Sbjct: 1   MDYVLEVLPSLLNGAAVSLQVFFLVLILSLPLGAVFAFLMQIKFKPLQW-------LLHF 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ +   Y +                 +     ++ +A +   AA+ +EI
Sbjct: 54  YVLIMRGTPLLLQLIFVYYV-----------LPSVGIIFDRMPAVILAFTLNYAAYFSEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ A+P+GQ EAA  L  T  +  R ++LPQ ++ ++P + ++ + L+K++SL  A+
Sbjct: 103 FRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNEVMTLVKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +DL+    T  N+      +  I   IYL +   + L   ++  K     
Sbjct: 163 GVSDLLLASRTAANRDASLAPMF-IAGAIYLLMIGAVTLISKQVEKKFDYYR 213



 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  + F  +I +  +G +         K + W+   YV + R  P L+ + F+
Sbjct: 11  LLNGAAVSLQVFFLVLILSLPLGAVFAFLMQIKFKPLQWLLHFYVLIMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV  I D    +     LN              A 
Sbjct: 71  YYVLPSVGIIFDRMPAVILAFTLNYAAYFSEIFRGGIEAI 110


>gi|269964164|ref|ZP_06178461.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3]
 gi|269831119|gb|EEZ85281.1| arginine ABC transporter, permease protein [Vibrio harveyi 1DA3]
          Length = 222

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 6/221 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++   S  +G +L+L  T             +    I+ F   
Sbjct: 1   MNEQHVWQMLDGLGTSLQLTAASLAVGCLLALMMTLTL-ILRTPGLHWVSRGIITLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV I L Y        + +   +  + +S  +    +AL+  TAA+  ++ +    
Sbjct: 58  GTPLLVQIFLVYYGPGQFDAVRE--SVLWTWLSQPWFCAMLALALNTAAYSTQLFKGAFN 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ +A  ALG+        VLLP A+R  +P  +++ + + K +SLA  +   DL+
Sbjct: 116 AIPSGQWQACRALGMNKTATL-KVLLPYAIRRAVPAYSNEVILVFKGTSLASTITIMDLM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 175 GYAQRINAQTYDTLTVFGIAGAFYLTVNGVLTLIFRQVEKK 215


>gi|239818200|ref|YP_002947110.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239804777|gb|ACS21844.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 226

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 17/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            ++           +  L+    TM   A       V G+VL+            +   A
Sbjct: 1   MNYEWDFSGVWAHRDMLLAGFLGTMKIAAVAIALGVVFGVVLAAL------RLSGRAWLA 54

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            P L++  F     P +      +   +  PVL   +          + +  IALS  + 
Sbjct: 55  RPALWVIEFYRNTPPLVHF----FWAFYALPVLIGVSL-------DPYAAAVIALSTQSG 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF AE+ R GL+++ RGQ EAA A+G+   +A R V+LPQA+  ++PP   +   L+K +
Sbjct: 104 AFFAEVFRGGLVSIERGQWEAARAVGMRSHQALRRVVLPQALARMLPPFIERSFELIKTT 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +LA  + ++DL+     + + T + +E+  +   I+      ++L       ++A+  +
Sbjct: 164 ALASTLAYSDLLYQAMQLNSITFRPLEVYTVVAAIFFLALFSLSLVARVAEHRLAISTR 222



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 37/76 (48%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++   ++   +L GF+ T  +A   +    + G ++ A RLS    +A      +E +R
Sbjct: 6   DFSGVWAHRDMLLAGFLGTMKIAAVAIALGVVFGVVLAALRLSGRAWLARPALWVIEFYR 65

Query: 138 NIPPLVVIFFLYKSVL 153
           N PPLV  F+ + ++ 
Sbjct: 66  NTPPLVHFFWAFYALP 81


>gi|295836169|ref|ZP_06823102.1| glutamate permease [Streptomyces sp. SPB74]
 gi|197695266|gb|EDY42199.1| glutamate permease [Streptomyces sp. SPB74]
          Length = 301

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 110/242 (45%), Gaps = 17/242 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                             L     T+   A   V +  LG +  +   RLS H   +   
Sbjct: 47  WIKWKPFFTDSRAWTTYLLPGLGQTLLAAAISVVIALPLGAIFGIA--RLSDHAWVRVPA 104

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A  + +        +P L+++ + Y+++          +   ST      ++   L  Y 
Sbjct: 105 ATVVEF-----FRSIPVLIMMIVAYEVYAQ--------YTSVSTDDRPLYAVVTGLVLYN 151

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A+ +AEIVR+G++++P+GQ EAA A+GL   +  R +LLPQ++ +++P + SQ + ++K+
Sbjct: 152 ASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQIMRSILLPQSVTAMLPAIVSQLVVIVKD 211

Query: 338 SSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++    +GF++L++    +    G   I    I   IY+ ++  +  F   L  ++ + 
Sbjct: 212 TAIGGSILGFSELINAVRPLSAAYGANTIACFTIVALIYIVVNFSLTSFATWLEKRLRVG 271

Query: 396 EK 397
           +K
Sbjct: 272 KK 273



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 37/88 (42%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T   ++ T +L G   T   A   ++ A  +G + G  RLS +  V       VE FR+
Sbjct: 54  FTDSRAWTTYLLPGLGQTLLAAAISVVIALPLGAIFGIARLSDHAWVRVPAATVVEFFRS 113

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           IP L+++   Y+       +      L 
Sbjct: 114 IPVLIMMIVAYEVYAQYTSVSTDDRPLY 141


>gi|209546329|ref|YP_002278219.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539186|gb|ACI59119.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +   +L IV+ +    L R    K  + L + ++   LI   P LV I   Y    
Sbjct: 25  FLLAICGMLLAIVIGIGGVAL-RDSALKPLRWLVIAFVE--LIRNTPFLVQIFFIY---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F             +  IAL     A+  EI+R G+ ++P+GQMEA +ALGL 
Sbjct: 78  -------FALPLTGIRLDPTPTAIIALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLH 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  RL++L  A+R+I P LTSQ++ L   +S+A A+   +L SV   I +++ ++ E+
Sbjct: 131 KAQVFRLIILKPALRAIYPSLTSQFVLLTLTTSIASAISAYELTSVSQRIESESFRSFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                  Y  +S ++       +A+ 
Sbjct: 191 YFTVTLFYFVISWVMMRLFAAFSARY 216



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 49/96 (51%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T       ++L+G + TF LA  GM+ A +IG    A R SA K + W+   +VE+ 
Sbjct: 5   LDFTPVIDGLPSLLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPLRWLVIAFVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P LV IFF+Y ++       D +      + +N
Sbjct: 65  RNTPFLVQIFFIYFALPLTGIRLDPTPTAIIALGIN 100


>gi|158334197|ref|YP_001515369.1| polar amino acid ABC transporter, permease protein [Acaryochloris
           marina MBIC11017]
 gi|158304438|gb|ABW26055.1| polar amino acid ABC transporter, permease protein [Acaryochloris
           marina MBIC11017]
          Length = 397

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P L+         L+   I    +       +         LT+         SF LG++
Sbjct: 154 PRLLSRGLPAVWFLTAFIILWLLMGGLGISTIGTNVWQGFLLTVVAAVVSIALSFPLGVL 213

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL-VLIALKYQLHFDKPVLGQFNFIG 258
           L+L      R       + L +LYI   +I GLP + VL      L    P   Q + + 
Sbjct: 214 LAL-----GRRSPLPVIRTLSVLYIE--VIRGLPLIGVLFVAGVMLPLILPSQVQLDAV- 265

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                         L+ ++AA++AE VR GL ++P+GQ EAA ALGL       LV+LPQ
Sbjct: 266 --------FRAICGLTLFSAAYLAENVRGGLQSIPQGQFEAAKALGLNPMLVLGLVVLPQ 317

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYL 375
           A+RS+IP +  Q++ L K++SL   +G  +L  V  ++++Q    G+  E+ L    +Y 
Sbjct: 318 ALRSVIPAIVGQFIGLFKDTSLLSIIGLVELTGVSRSVLSQPRFIGRHGEVYLFIGLLYW 377

Query: 376 SLSIMIALFMNRLNAKIALK 395
               +++L   RL  ++ +K
Sbjct: 378 LFCYLMSLGSRRLEHQLGVK 397


>gi|323528628|ref|YP_004230780.1| ectoine/hydroxyectoine ABC transporter permease EhuD [Burkholderia
           sp. CCGE1001]
 gi|323385630|gb|ADX57720.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. CCGE1001]
          Length = 219

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 8/196 (4%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F+  I  ++           +      +     F++  + +  L+   Y L +  PV   
Sbjct: 26  FITLIGFAIALVLGLVLAVLRRSPVKAVSRTVGFIVEFIRSTPLLIQVYVLFYVLPVY-- 83

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                         +  + ++ + A + +E+ R+GL  V RGQ EAA AL L+  +  R 
Sbjct: 84  ------GITMSALTAGTVGIALHYACYTSEVYRAGLNGVARGQWEAACALSLSPWRTYRG 137

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA+R +IP L +  + + K++ +  A+   +L+     I ++T + +E I +    
Sbjct: 138 VILPQAIRPVIPALGNYLVAMFKDTPVLSAITVVELMQQAKNIGSETFRYLEPITLAGIF 197

Query: 374 YLSLSIMIALFMNRLN 389
           +L +S+  A  + RL 
Sbjct: 198 FLLISVTFAQLVRRLE 213


>gi|170733746|ref|YP_001765693.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169816988|gb|ACA91571.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 237

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R   +K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKKKWLSGAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +     +  +          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQAVRGTPML-DAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 PFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     +   +
Sbjct: 203 FGIAALLYLVISFTLVWLFRQAERR 227



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y T    G   T WL    +     +   +   R+S  K ++    +
Sbjct: 5   IQEYWRNYLYTDGYRTT---GVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|170691879|ref|ZP_02883043.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143163|gb|EDT11327.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 245

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 8/222 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
              S    T++     F  +  +G V  +      R    +   A    Y+S F   G+P
Sbjct: 25  WLFSGLVNTVELTLLAFSVALAMGTVFGVM-----RTLPNRAANAASAAYVSIF--RGVP 77

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGLIAV 292
            +V   + + +  +       ++       P+F+ +  ++L  YT + I E VR+G+ A 
Sbjct: 78  LIVQFFIWFFVVPEVLPTAAGDWFKSLPSHPQFLIASVVSLGVYTGSRICEQVRAGIQAR 137

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ  AA ALGLT  +A R VLLP A R+I+ PLTS++L + KNS++A  +G  +L   
Sbjct: 138 PVGQFHAAFALGLTRAQAYRHVLLPVAFRTILGPLTSEFLIISKNSAVASTIGLLELSGQ 197

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +++ T Q  E  +     Y++L+  I   M  +  + AL
Sbjct: 198 ARQLVDYTAQPYESFICVTLAYMALNFAILRGMRWIRRRTAL 239



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 32/90 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +  G VNT  L       A  +GT+ G  R   N+        YV +FR +P +V
Sbjct: 21  TYLDWLFSGLVNTVELTLLAFSVALAMGTVFGVMRTLPNRAANAASAAYVSIFRGVPLIV 80

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
             F  +  V  VLP                
Sbjct: 81  QFFIWFFVVPEVLPTAAGDWFKSLPSHPQF 110


>gi|24113680|ref|NP_708190.1| histidine transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30063734|ref|NP_837905.1| histidine transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110806271|ref|YP_689791.1| histidine transport system permease [Shigella flexneri 5 str. 8401]
 gi|331658391|ref|ZP_08359353.1| histidine transport system permease protein HisQ [Escherichia coli
           TA206]
 gi|24052746|gb|AAN43897.1| histidine transport system permease protein [Shigella flexneri 2a
           str. 301]
 gi|30041989|gb|AAP17715.1| histidine transport system permease protein [Shigella flexneri 2a
           str. 2457T]
 gi|110615819|gb|ABF04486.1| histidine transport system permease protein [Shigella flexneri 5
           str. 8401]
 gi|281601749|gb|ADA74733.1| Histidine transport system permease protein [Shigella flexneri
           2002017]
 gi|313651132|gb|EFS15531.1| histidine transport system permease protein hisQ [Shigella flexneri
           2a str. 2457T]
 gi|315298159|gb|EFU57423.1| arginine/ornithine transport protein [Escherichia coli MS 16-3]
 gi|331056639|gb|EGI28648.1| histidine transport system permease protein HisQ [Escherichia coli
           TA206]
          Length = 228

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +       G       ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNMVTEAMGVGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T +  
Sbjct: 132 FTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|270263716|ref|ZP_06191985.1| transporter [Serratia odorifera 4Rx13]
 gi|270042600|gb|EFA15695.1| transporter [Serratia odorifera 4Rx13]
          Length = 246

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
              S   +T+  +   ++ +F +G +  +  T  +R        + +  + +PL+     
Sbjct: 24  WIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSALGTCYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+   L      +     QF           F+S  + L  +TAA + E VR+
Sbjct: 84  WYLVVPELLPANLGMWFKTELDPNVQF-----------FISSMLCLGLFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+TS+ LNL+KNS++A  +G  
Sbjct: 133 AIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I LFM  +  K+ L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFTAITLAYIGINAVIMLFMRLVEKKVQL 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 64/182 (35%), Gaps = 17/182 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A  +G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            R   N+ ++ +   YVE+FRN+P +V  F  Y  V  +LP       L           
Sbjct: 53  LRTVPNRFLSALGTCYVELFRNVPLIVQFFTWYLVVPELLPA-----NLGMWFKTELDPN 107

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               ++      +F  + V   V +      R  R      G  LP  Y    L      
Sbjct: 108 VQFFISSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRV 167

Query: 235 LV 236
           +V
Sbjct: 168 IV 169


>gi|257870688|ref|ZP_05650341.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257804852|gb|EEV33674.1| polar amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 214

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++ + + +  + LS   +T+       + S  LGI+L+       R           ++ 
Sbjct: 1   MIDYLVSVMPQLLSGAGITIKLFGLTLIGSIPLGIILAFILASRLRILK-------AIVQ 53

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +L+ G P L+ +   +   +  P+L          V   F +  IA     AA+ AE
Sbjct: 54  VYVWLMRGTPLLLQLIFVF---YGLPILN--------IVFDRFEAALIAFIINYAAYYAE 102

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+ ++P GQ EAA  L L   +  R +++PQ ++  +P + ++ +NL+K++SL   
Sbjct: 103 IFRGGIQSIPAGQYEAAKVLRLAPLQTIRKIIIPQVVKITLPSVGNEVINLVKDTSLVYI 162

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G +D++ +G   + +    +  +L    IYL ++ +  L + +L  K+    
Sbjct: 163 LGLSDVMRIGKIAMERD-STLVPLLGVALIYLMMTGIFTLILKQLETKLDYYR 214



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L    +I +  +G ++     S  +++  I +VYV + R  P L+ + F+
Sbjct: 12  LLSGAGITIKLFGLTLIGSIPLGIILAFILASRLRILKAIVQVYVWLMRGTPLLLQLIFV 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  + D          +N              + 
Sbjct: 72  FYGLPILNIVFDRFEAALIAFIINYAAYYAEIFRGGIQSI 111


>gi|218659590|ref|ZP_03515520.1| octopine ABC transporter, permease protein [Rhizobium etli IE4771]
          Length = 241

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 8/222 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+   +T+  +   F+   V+G +++     LSRH   +      L    T ++ 
Sbjct: 18  WGWLLLTAAAMTIGVSVCGFLAGTVIGTMITFMQ--LSRHMAIRW-----LADCYTTVLR 70

Query: 231 GLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           G+P L++I L Y         LG      G    P F++  +AL   +AA+ AE+ R   
Sbjct: 71  GVPDLLVIYLFYFGGSAFLGSLGGLFGYQGFIGMPAFLTGTLALGVVSAAYQAEVFRGAY 130

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V RG++EAA A+G+      R ++ P  +R  IP L + +  +LK S+L    G  +L
Sbjct: 131 RSVARGEIEAASAVGMRRWPKFRRIVAPLVLRYAIPGLGNTWQLVLKESALVSVTGLVEL 190

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +         T +  E  L+ + +YL ++   ++   R+ A+
Sbjct: 191 LRQSQIAAGSTRRPFEFYLMAVVLYLVITWFSSILFRRMEAR 232



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L     T  ++  G +  T+IGT++   +LS +  + W+   Y  V R +P L+V
Sbjct: 18  WGWLLLTAAAMTIGVSVCGFLAGTVIGTMITFMQLSRHMAIRWLADCYTTVLRGVPDLLV 77

Query: 145 IFFLYKSV 152
           I+  Y   
Sbjct: 78  IYLFYFGG 85


>gi|171320896|ref|ZP_02909893.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171093839|gb|EDT38973.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 238

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 3/210 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I + +FV+GIVL L     ++    +  + +   Y  T +   +P L+LI L Y  
Sbjct: 27  VTLEISLGAFVVGIVLGLLGAA-AKLSGVRALERIAQGY--TTVCRAVPELLLILLLYYA 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D   L       G      F +  I L     A+ AEI+R  ++A+P GQ+EA  A G
Sbjct: 84  GTDAINLLMTAIGVGPVAVNGFAAAVIVLGIVQGAYAAEIIRGAILAIPYGQIEAGRAFG 143

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
                  R V LP      +    + +L L+K+S+L   VG+++L+         T + +
Sbjct: 144 APPGLVFRRVTLPAMAPYALAGFANLWLILVKDSALISVVGYSELLYTAKQAAGSTREYM 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              L+   +Y  ++ +  +    +  +   
Sbjct: 204 RYYLMVAAVYFVITSLSGMLFREIERRFGR 233


>gi|241113593|ref|YP_002973428.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861801|gb|ACS59467.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 219

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +     I + + + G +L +F   L+  +     +     Y    +I G 
Sbjct: 10  WIARYVIMNGIGVTVSISLLAILAGSILGVFVG-LALVYGGVVLRLAVRAYTD--IIRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y +              G  + P F +  +AL+ + ++ + EIVR  L A+
Sbjct: 67  PVLVLVLASYYVSAAV----------GLDLGP-FSAGVLALAVFCSSHVGEIVRGALQAI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G A+L+  
Sbjct: 116 PKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 176 TQEIISRNFMSLQFYFLAGGLYFIINYGIEHFGKYVERKTAL 217



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I+ G   T  ++   ++  +I+G  VG   +    ++    R Y ++ R  P LV++  
Sbjct: 15  VIMNGIGVTVSISLLAILAGSILGVFVGLALVYGGVVLRLAVRAYTDIIRGTPVLVLVLA 74

Query: 148 LYKSVLSV 155
            Y    +V
Sbjct: 75  SYYVSAAV 82


>gi|16130243|ref|NP_416811.1| histidine/lysine/arginine/ornithine transporter permease subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|89109128|ref|AP_002908.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K-12 substr. W3110]
 gi|170081924|ref|YP_001731244.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|194436195|ref|ZP_03068297.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           101-1]
 gi|238901483|ref|YP_002927279.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|253772768|ref|YP_003035599.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162317|ref|YP_003045425.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|256022007|ref|ZP_05435872.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia sp. 4_1_40B]
 gi|297520317|ref|ZP_06938703.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli OP50]
 gi|300948543|ref|ZP_07162637.1| arginine/ornithine transport protein [Escherichia coli MS 116-1]
 gi|300956424|ref|ZP_07168715.1| arginine/ornithine transport protein [Escherichia coli MS 175-1]
 gi|301023555|ref|ZP_07187319.1| arginine/ornithine transport protein [Escherichia coli MS 196-1]
 gi|301647589|ref|ZP_07247386.1| arginine/ornithine transport protein [Escherichia coli MS 146-1]
 gi|2507492|sp|P52094|HISQ_ECOLI RecName: Full=Histidine transport system permease protein hisQ
 gi|1788646|gb|AAC75368.1| histidine/lysine/arginine/ornithine transporter permease subunit
           [Escherichia coli str. K-12 substr. MG1655]
 gi|1799689|dbj|BAA16154.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli str. K12 substr. W3110]
 gi|169889759|gb|ACB03466.1| histidine/lysine/arginine/ornithine transporter subunit; membrane
           component of ABC superfamily [Escherichia coli str. K-12
           substr. DH10B]
 gi|194424923|gb|EDX40908.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           101-1]
 gi|238861422|gb|ACR63420.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BW2952]
 gi|242377941|emb|CAQ32710.1| hisQ, subunit of histidine ABC transporter and
           lysine/arginine/ornithine ABC Transporter [Escherichia
           coli BL21(DE3)]
 gi|253323812|gb|ACT28414.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974218|gb|ACT39889.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli B str. REL606]
 gi|253978385|gb|ACT44055.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli BL21(DE3)]
 gi|260448598|gb|ACX39020.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|299880790|gb|EFI89001.1| arginine/ornithine transport protein [Escherichia coli MS 196-1]
 gi|300316773|gb|EFJ66557.1| arginine/ornithine transport protein [Escherichia coli MS 175-1]
 gi|300451953|gb|EFK15573.1| arginine/ornithine transport protein [Escherichia coli MS 116-1]
 gi|301074279|gb|EFK89085.1| arginine/ornithine transport protein [Escherichia coli MS 146-1]
 gi|309702620|emb|CBJ01949.1| histidine ABC transporter, permease protein [Escherichia coli ETEC
           H10407]
 gi|315136943|dbj|BAJ44102.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli DH1]
 gi|315615577|gb|EFU96209.1| histidine transport system permease protein hisQ [Escherichia coli
           3431]
 gi|323936598|gb|EGB32885.1| inner membrane transport system [Escherichia coli E1520]
 gi|323940995|gb|EGB37182.1| inner membrane transport system [Escherichia coli E482]
 gi|323961381|gb|EGB56992.1| inner membrane transport system [Escherichia coli H489]
 gi|323973108|gb|EGB68301.1| inner membrane transport system [Escherichia coli TA007]
          Length = 228

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPSMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|21221280|ref|NP_627059.1| amino acid ABC transporter transmembrane protein [Streptomyces
           coelicolor A3(2)]
 gi|256787535|ref|ZP_05525966.1| amino acid ABC transporter transmembrane protein [Streptomyces
           lividans TK24]
 gi|289771430|ref|ZP_06530808.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           lividans TK24]
 gi|6689163|emb|CAB65560.1| probable amino acid ABC transporter protein, integral membrane
           component [Streptomyces coelicolor A3(2)]
 gi|289701629|gb|EFD69058.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           lividans TK24]
          Length = 216

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 93/232 (40%), Gaps = 18/232 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                              +T+       + SF LG+V +L     SR      G     
Sbjct: 2   KWDWSAVSDFMPHFWDGLLVTLQILVLGSLVSFGLGLVWALLMRVPSRWVTWPVG----- 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             + T  +   P LV +   + +               +       +  +A+  + + + 
Sbjct: 57  --VVTEFVRNTPLLVQLFFLFYV-----------LPEWNITFSALTTGVVAIGLHYSTYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++ R+G+  VP GQ EAA AL L  R+    V+LPQA+R + P L +  +++LK++ L 
Sbjct: 104 MQVYRAGIEGVPVGQWEAATALNLPMRRTWTAVILPQAIRRVTPALGNYVISMLKDTPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +A+   +++        Q  Q  E + +    ++ +S + +L +  L  ++A
Sbjct: 164 MAITVLEMLGEARLFSQQNFQFTEPLTVIGVAFIVISYLASLALRALERRLA 215



 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++ S +      G + T  +   G + +  +G +        ++ V W   V  E  R
Sbjct: 4   DWSAVSDFMPHFWDGLLVTLQILVLGSLVSFGLGLVWALLMRVPSRWVTWPVGVVTEFVR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDH 161
           N P LV +FFL+  +         
Sbjct: 64  NTPLLVQLFFLFYVLPEWNITFSA 87


>gi|168229728|ref|ZP_02654786.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194473000|ref|ZP_03078984.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197249262|ref|YP_002147313.1| histidine ABC transporter permease HisQ [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|194459364|gb|EDX48203.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197212965|gb|ACH50362.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|205335765|gb|EDZ22529.1| histidine ABC transporter, permease protein HisQ [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 228

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGLVG-AGAKLSQNRITGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +   +           ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            TH +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +    +LS N++   I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRITGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|325520347|gb|EGC99483.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 158

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 63/141 (44%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   F++  + L     A+  E  R   ++VPRGQ+EA  A G+   +    +L P
Sbjct: 15  WDQIDIDPFVAGVVTLGFIYGAYFTETFRGAFLSVPRGQLEAGFAYGMNGWRVFHRILFP 74

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q MR  +P + + +  L+K ++L   +G AD+V         T       L    IYL++
Sbjct: 75  QMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKSTLDFFFFTLAAGAIYLAI 134

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           + +  L ++ L  + +   ++
Sbjct: 135 TTVSNLVLHHLEKRYSAGVRR 155


>gi|13475817|ref|NP_107387.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14026576|dbj|BAB53173.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 233

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 2/222 (0%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F      +           + V  F+L            R    +    L  +Y + F  
Sbjct: 6   FQQGGWGAALLAASSVTLALSVLGFIL-GAALGATAAAGRLSSRRVPAWLAHVYGTVFRG 64

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                L +  L Y        +G      G    P F +  +A+   + A+  E+ R   
Sbjct: 65  VPD-LLTIYLLYYGGSIALTQIGTLFGSDGFVGLPTFATGVLAIGIISGAYQGEVYRGAY 123

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV RGQ EA  ALGL+  ++ RLV++PQ MR  +P L + +  +LK+S+L   +G  +L
Sbjct: 124 QAVDRGQFEACKALGLSRYQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIGLVEL 183

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +         T +     +    +Y  ++++ A       A+
Sbjct: 184 MRQAQIGAGSTREPFIFYVAAAALYFVIAVVTASVFRFSEAR 225



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L     T  L+  G I    +G    AGRLS+ ++ AW+  VY  VFR +P L+ 
Sbjct: 11  WGAALLAASSVTLALSVLGFILGAALGATAAAGRLSSRRVPAWLAHVYGTVFRGVPDLLT 70

Query: 145 IFFLYKSV 152
           I+ LY   
Sbjct: 71  IYLLYYGG 78


>gi|325063349|gb|ADY67039.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 235

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 5/224 (2%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  + + ++     +     IF+ S+ L + L+L    + R    +        Y+S   
Sbjct: 9   ILSDPQYIAMLWHGLQMTFVIFIGSWSLAMTLALVLLCV-RFSSSRFADRAVAAYVS--Y 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              +PTLV + L Y   F     G  +++ G      F    + L    AA+ +E +RSG
Sbjct: 66  HRNVPTLVQLMLWYFGIFTLLPSGLTDWLIGHNAEAIF--AVVGLGLCQAAYFSEDLRSG 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +V  GQMEAA ALG  +  A R +++PQ +R+ +PPL +  ++L KNSSLA+ +G ++
Sbjct: 124 LRSVSPGQMEAAKALGHGYLSAMRFIIMPQGVRNALPPLINHSVSLFKNSSLALIIGASE 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L      I N + Q  EI L+   +YL  S++I      L+ ++
Sbjct: 184 LTHAIKEIENLSFQTFEIYLVGTVLYLFFSLLIMGAGAYLSMRL 227



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 68  AGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           +GF++   +    SD  Y   +  G   TF +       A  +  ++   R S+++    
Sbjct: 2   SGFDLSAIL----SDPQYIAMLWHGLQMTFVIFIGSWSLAMTLALVLLCVRFSSSRFADR 57

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
               YV   RN+P LV +   Y  + ++LP      ++
Sbjct: 58  AVAAYVSYHRNVPTLVQLMLWYFGIFTLLPSGLTDWLI 95


>gi|320546644|ref|ZP_08040956.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448699|gb|EFW89430.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 213

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + V S   G +L+            K  + L  LY+  +++ G P L
Sbjct: 12  LDGAAVTLQVFCIVIVLSIPFGAILAFLMQ-----IKFKPLQWLLTLYV--WIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                 V     +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGVVMDRLPAAILAFTLNYAAYFAEIFRGGISAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +    ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+      +  +   IYL +  ++ L   +   K 
Sbjct: 174 AANRDASLAPMF-VAGAIYLLMIGIVTLISKQTEKKF 209



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 37/106 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S    ++L G   T  +    ++ +   G ++        K + W+  +YV + R  P L
Sbjct: 5   SQILPSLLDGAAVTLQVFCIVIVLSIPFGAILAFLMQIKFKPLQWLLTLYVWIMRGTPLL 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + + F Y  + SV  + D          LN             +A 
Sbjct: 65  LQLIFFYYVLPSVGVVMDRLPAAILAFTLNYAAYFAEIFRGGISAI 110


>gi|295398548|ref|ZP_06808581.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294973212|gb|EFG49006.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 230

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 19/226 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T+       +FS +LG +  +          +  G          
Sbjct: 7   FQWMNIQFLLDGLWVTLQVTFYAIIFSLILGGIFGVVRFMGIPILSKALG---------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I  +  L L+ + +  +F  P L              F +   AL+ + +A I+EI+R
Sbjct: 57  LVIDIIRNLPLLLIIFFTYFALPQL--------GIRLNIFWAAVGALTIFESAMISEIIR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL A+P+GQ EA ++ GLT  +    +LLPQA+RS+ P + SQ + L+K++SLA  +  
Sbjct: 109 GGLNAIPKGQAEAGLSTGLTRVQTLIYILLPQAVRSMAPSIVSQLIALIKDTSLATIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I NQ T   I + +I  F+Y  +  +++ F   L+ +
Sbjct: 169 PELTHNAKIIYNQNTAYVIPMFVIMTFLYWLVCYILSKFSKYLSNR 214



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 43/102 (42%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  + F  +I + I+G + G  R     +++    + +++ RN+P L++IF
Sbjct: 13  QFLLDGLWVTLQVTFYAIIFSLILGGIFGVVRFMGIPILSKALGLVIDIIRNLPLLLIIF 72

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           F Y ++  +    +        + +    +    +    NA 
Sbjct: 73  FTYFALPQLGIRLNIFWAAVGALTIFESAMISEIIRGGLNAI 114


>gi|227546751|ref|ZP_03976800.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|322689655|ref|YP_004209389.1| glutamate ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|227212713|gb|EEI80594.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|320460991|dbj|BAJ71611.1| glutamate ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 366

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 114/266 (42%), Gaps = 16/266 (6%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           + +   I  ++    L   ++ +   PD    L + ++         T        + + 
Sbjct: 21  IRIVNWIAGILFAVVLVFILMRLHNPPDGENQLSWELWKPAVEREAWTDFYLPGLWMTIK 80

Query: 193 SFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           + ++ +V ++       + R       + +  + +       +  L++   ++      P
Sbjct: 81  ATIVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFWRWFAFAGLP 140

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                        SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  +
Sbjct: 141 -------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQ 187

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +     ++ +++
Sbjct: 188 SLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFNILQTLVM 247

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
              IY     +++     L +++  +
Sbjct: 248 AAVIYFIACWLLSRLAEWLPSRMQQR 273



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  +  V V
Sbjct: 56  ELWKPAVEREAWTDFYLPGLWMTIKATIVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|57242586|ref|ZP_00370523.1| MW1799 [Campylobacter upsaliensis RM3195]
 gi|57016515|gb|EAL53299.1| MW1799 [Campylobacter upsaliensis RM3195]
          Length = 211

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 18/210 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                 +   +  +G+V       L R         +   +I   +I G P ++ + +  
Sbjct: 16  YGVTILLTFCAVCIGLVFGFIL-ALIRFSPFGVLNFIVDEFID--IIRGTPVILQLMIFA 72

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            + F              T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A
Sbjct: 73  FVIF--------------TFFDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARA 118

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GL ++   R ++LPQA+++I+P L +++++L K +S+   +   D+     ++      
Sbjct: 119 MGLDYQSTMREIILPQALKNILPALANEFISLFKETSVVGFISVVDITMQSKSLQAVLYN 178

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + I+    +Y     + +L +  L  ++
Sbjct: 179 P-KPIIFTGLVYYVSVKIFSLGVRLLEKRL 207



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 30/73 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
             A A ++ +  T  L F  +    + G ++   R S   ++ +I   ++++ R  P ++
Sbjct: 7   PNAKAYVLSYGVTILLTFCAVCIGLVFGFILALIRFSPFGVLNFIVDEFIDIIRGTPVIL 66

Query: 144 VIFFLYKSVLSVL 156
            +      + +  
Sbjct: 67  QLMIFAFVIFTFF 79


>gi|163858764|ref|YP_001633062.1| amino acids ABC transporter, permease protein [Bordetella petrii
           DSM 12804]
 gi|163262492|emb|CAP44795.1| amino acids ABC transporter, permease protein [Bordetella petrii]
          Length = 230

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 111/235 (47%), Gaps = 18/235 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
             + +L       N  +     T+         +F +G++L+L      + F+       
Sbjct: 6   SDNWLLLLVGQWPNGPMGGLVATVGLALVSLALAFPIGVLLALGRISSHKIFY------- 58

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              + +T +++ +  L LI   +  +F  P+L      G        +++  AL  Y  A
Sbjct: 59  ---WPATAVVYVVRGLPLIMFIFWAYFFLPLLIGNTVSG-------VVTMAAALIIYEGA 108

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++EI+RSG+ A+P GQMEA  +LGL+H +A R ++LPQA+ + IP + SQ+++ +K +S
Sbjct: 109 YLSEIIRSGIQALPAGQMEAGRSLGLSHMQAMRKIVLPQALYNTIPSMLSQFISTVKETS 168

Query: 340 LAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L   +   +L      + N    +  E+  +    Y  L++++   +  + A++ 
Sbjct: 169 LGFVISVHELTFAAAQVNNMLLTKPFEVFSLLALTYFVLNLILTGIVKLVEARMG 223



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           G V T  LA   +  A  IG L+  GR+S++K+  W     V V R +P ++ IF+ Y 
Sbjct: 24  GLVATVGLALVSLALAFPIGVLLALGRISSHKIFYWPATAVVYVVRGLPLIMFIFWAYF 82


>gi|254437975|ref|ZP_05051469.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198253421|gb|EDY77735.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 222

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 18/201 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            S+++G+ +      L+     +  +    ++I    I G PTL+ I + Y   F  P L
Sbjct: 35  LSWIIGLGV-----VLAGRSKLRILRTPATIFIWF--IRGTPTLIQIFMIY---FGLPQL 84

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  G  ++P +++  +AL     A++AEI+RSG  A+P GQ EA  +LGL      
Sbjct: 85  -------GLGLNP-YVAGILALGLSGGAYVAEILRSGFNAIPNGQFEAGRSLGLPTWAIL 136

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V+LPQ +R ++P LT++ +N LKN+SL  A+   ++       I  T +  +  ++  
Sbjct: 137 WFVVLPQLLRIVVPALTNEAMNTLKNTSLLSAITIVEITLYAKQQIASTFRPFDYYILAA 196

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
             YL L+  +  F      + 
Sbjct: 197 IFYLILAEALNQFARWHERRY 217


>gi|50123385|ref|YP_052552.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium atrosepticum SCRI1043]
 gi|49613911|emb|CAG77364.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium atrosepticum SCRI1043]
          Length = 247

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLS------LFATRLSRHFHEKTGKALPLLYISTF 227
                  +T+  +    V S VLG +L+      +   R     +    +  PLL    F
Sbjct: 20  WLWHGFLITLGISLGTVVLSTVLGFLLAAARDSQIHVLRGVVVAYSSLFRNTPLLVQLFF 79

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG   L    +   L  + P          +  S EF++    L+ Y++AFIAE +RS
Sbjct: 80  WYFGAGQLFSSEVMQWL--NTPHSISLWGATLAWPSFEFLAGLAGLTLYSSAFIAEEIRS 137

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V RGQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSL +A+G A
Sbjct: 138 GIRGVARGQKYAAQALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGVA 197

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +  +   +   +Y+ +  ++  +      +
Sbjct: 198 ELSYASRQVETETLRTFQAFGVATVLYIVIIAVMEGWGMWRQQR 241



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 39/90 (43%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +  +     Y   +  GF+ T  ++   ++ +T++G L+ A R S   ++  +   Y 
Sbjct: 6   QSLESWLLAPQYLIWLWHGFLITLGISLGTVVLSTVLGFLLAAARDSQIHVLRGVVVAYS 65

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            +FRN P LV +FF Y     +        
Sbjct: 66  SLFRNTPLLVQLFFWYFGAGQLFSSEVMQW 95


>gi|218681463|ref|ZP_03529350.1| arginine transporter permease subunit ArtQ [Rhizobium etli CIAT
           894]
          Length = 223

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 102/208 (49%), Gaps = 7/208 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S V G ++++    L+  +  +  + + + Y+S  LI GLP L++I L +  
Sbjct: 18  MTLGVAVGSLVAGSLIAVVLAPLA-IYGNRVTRRIIMGYVS--LIRGLPELLVIFLIFYG 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                     N  G         +   ALS   AA++ EI+R  L++V  GQ EAA+ALG
Sbjct: 75  GTVLLT----NLTGSYVEVDAMSAGIAALSVVAAAYLTEILRGALLSVSAGQWEAALALG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
               +A RLV+LPQ M   +P L +Q+L +LK S+L   VG  +L+         T Q +
Sbjct: 131 FRRPRAFRLVILPQMMARALPGLGNQWLVILKESALVSVVGLEELMRKSVVAAGATHQPL 190

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
              L    +Y+S++ + +L +    +++
Sbjct: 191 AFYLTAAGLYVSITGVSSLLLKAYESRL 218



 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G + T  +A   ++  ++I  ++    +  N++   I   YV + R +P L+
Sbjct: 7   QYKEQLLQGLLMTLGVAVGSLVAGSLIAVVLAPLAIYGNRVTRRIIMGYVSLIRGLPELL 66

Query: 144 VIFFLYKSVL 153
           VIF ++    
Sbjct: 67  VIFLIFYGGT 76


>gi|194432871|ref|ZP_03065155.1| histidine ABC transporter, permease protein HisQ [Shigella
           dysenteriae 1012]
 gi|194418859|gb|EDX34944.1| histidine ABC transporter, permease protein HisQ [Shigella
           dysenteriae 1012]
 gi|332090124|gb|EGI95223.1| histidine transport system permease protein hisQ [Shigella
           dysenteriae 155-74]
          Length = 228

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQVAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|213968636|ref|ZP_03396778.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|302059835|ref|ZP_07251376.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132496|ref|ZP_07258486.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213926569|gb|EEB60122.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 232

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|146318204|ref|YP_001197916.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis 05ZYH33]
 gi|146320398|ref|YP_001200109.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis 98HAH33]
 gi|253751386|ref|YP_003024527.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|253753287|ref|YP_003026427.1| amino acid ABC transporter permease protein [Streptococcus suis
           P1/7]
 gi|253755882|ref|YP_003029022.1| amino acid ABC transporter permease protein [Streptococcus suis
           BM407]
 gi|145689010|gb|ABP89516.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis 05ZYH33]
 gi|145691204|gb|ABP91709.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis 98HAH33]
 gi|251815675|emb|CAZ51263.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis SC84]
 gi|251818346|emb|CAZ56170.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis BM407]
 gi|251819532|emb|CAR45120.1| putative amino acid ABC transporter permease protein [Streptococcus
           suis P1/7]
 gi|292558005|gb|ADE31006.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis GZ1]
 gi|319757672|gb|ADV69614.1| amino acid (glutamine) ABC transporter, permease protein
           [Streptococcus suis JS14]
          Length = 213

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 98/232 (42%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +++     + + S  LG V +       +           LL+ 
Sbjct: 1   MDYVLEVLPSLLNGAAVSLQVFFLVLILSLPLGAVFAFLMQIKFKPLQW-------LLHF 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ +   Y +                       ++ +A +   AA+ +EI
Sbjct: 54  YVLIMRGTPLLLQLIFVYYV-----------LPSVGITFDRMPAVILAFTLNYAAYFSEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ A+P+GQ EAA  L  T  +  R ++LPQ ++ ++P + ++ + L+K++SL  A+
Sbjct: 103 FRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNEVMTLVKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +DL+    T  N+      +  I   IYL +   + L   ++  K     
Sbjct: 163 GVSDLLLASRTAANRDASLAPMF-IAGAIYLLMIGAVTLISKQVEKKFDYYR 213



 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  + F  +I +  +G +         K + W+   YV + R  P L+ + F+
Sbjct: 11  LLNGAAVSLQVFFLVLILSLPLGAVFAFLMQIKFKPLQWLLHFYVLIMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D    +     LN              A 
Sbjct: 71  YYVLPSVGITFDRMPAVILAFTLNYAAYFSEIFRGGIEAI 110


>gi|126740301|ref|ZP_01755990.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126718756|gb|EBA15469.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 248

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I   +F LG+V+ LF     + +  K  +   LL I T +I  +P LVLI + Y +  
Sbjct: 34  LQIAFGAFGLGLVIGLFG-AYGKLYGGKVTRD--LLAIYTTVIRAVPELVLILILYYVGS 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D          GG        +    L     A+  E++R  + AVP GQ+EAA + G+ 
Sbjct: 91  DIINQISEAMGGGRVEINGVAAGIWVLGVVQGAYATEVLRGAIQAVPTGQIEAAKSYGMP 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M   +P L + +L   K+++L   VGF +L        + T      
Sbjct: 151 AIMIMRRVTIPAMMSFAVPGLANLWLIATKDTALLAVVGFNELTLETRQAASSTRAYFTF 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L   F+YL +++       R+  
Sbjct: 211 FLAAGFLYLMVTLCSGAVFARIEK 234


>gi|331017447|gb|EGH97503.1| arginine/ornithine ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 232

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L           +F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLTTLKLLAISLAFGLLAALPLGLMRVSKNLWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF  +  S + P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFAAVRESFLWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKVKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|315287081|gb|EFU46495.1| putative ATP synthase F0, A subunit [Escherichia coli MS 110-3]
          Length = 257

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 18/261 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIV 199
           PL   FF  + +             PFG       +          +   ++ +F++G  
Sbjct: 1   PLPPSFFWSRFMSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSF 60

Query: 200 LSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             +  T  +R        + +  + +PL+         +P L+   +      +     Q
Sbjct: 61  FGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQ 120

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F           F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R 
Sbjct: 121 F-----------FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRY 169

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           VLLP A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        
Sbjct: 170 VLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA 229

Query: 374 YLSLSIMIALFMNRLNAKIAL 394
           Y+ ++  I L M  +  K+ L
Sbjct: 230 YVLINAFIMLVMTLVERKVRL 250



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 14  IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 63

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 64  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 110


>gi|171320895|ref|ZP_02909892.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171093838|gb|EDT38972.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 231

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 9/215 (4%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ---- 243
           K+ V S V G  L++ A   +R         +   +    +I G P LV I L Y     
Sbjct: 22  KLLVISAVFGFGLAI-AIAFARLSPNPFIARMSKGFTE--VIRGTPLLVQIYLIYYGVGS 78

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L    P L    F     +   F  +  AL     A++ E++R+GL  VP+G++EAA A+
Sbjct: 79  LFVGWPALRDSVF--WPFLRDGFWYVAFALVISVGAYVGEVLRAGLRGVPKGEIEAARAM 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      R V LP+A++ ++P L  + + LLK+++LA  V   D++     I  QT + 
Sbjct: 137 GMRPSMIARRVSLPRAIQILLPTLAGETVMLLKSTALASTVAVMDVLGAANYIRAQTLRT 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E +L    IY++L+ +I     RL  ++ ++  +
Sbjct: 197 YEPLLAIAVIYVALAFVIEHAFGRLERRVPVRMPR 231



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%)

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            L     +    +   +   RLS N  +A + + + EV R  P LV I+ +Y  V S+  
Sbjct: 22  KLLVISAVFGFGLAIAIAFARLSPNPFIARMSKGFTEVIRGTPLLVQIYLIYYGVGSLFV 81

Query: 158 IPDHSIVLPFGMFLNNRGLSFPT 180
                    F  FL +       
Sbjct: 82  GWPALRDSVFWPFLRDGFWYVAF 104


>gi|91225768|ref|ZP_01260797.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
 gi|91189657|gb|EAS75932.1| arginine ABC transporter, permease protein [Vibrio alginolyticus
           12G01]
          Length = 229

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 7/212 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++   S ++G++L++     S     +     P+    T +      LV++ + + 
Sbjct: 15  WMTVQLAFTSLLVGLILAVVFA--SGEMSRRVFVKWPMTAFVTIVRGLPEILVVLFIYFG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G       F+S  +ALS   A++ ++ +R  L AV RGQ EAA AL
Sbjct: 73  -----STQVLFLITGDFIEVSPFLSGVVALSLIFASYASQTLRGALKAVGRGQREAASAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++   A   ++LPQA+R  +P LT+Q+L LLK+++L   +G  DL+           +A
Sbjct: 128 GISQAHAFVRIVLPQAVRHALPGLTNQWLVLLKDTALVSLIGVTDLLKQAQLTSAAIHEA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    IYL ++++    +  ++ K +++
Sbjct: 188 FTWYATAAAIYLGITLITQRAVKLIDKKFSIQ 219


>gi|13476743|ref|NP_108312.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14027504|dbj|BAB53773.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 385

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P   +   L   VL ++        +     +         +T+  +      S  LG 
Sbjct: 136 VPRKGLNAILLFLVLPIVSFFLLIGGVFGLPHVETSRWGGLLVTLSLSFVGIAVSLPLGT 195

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I T     L T VL  +   L    P    F+   
Sbjct: 196 VLAL-----GRRSKMPIVKTLCVVFIETVRGIPLIT-VLFFVSVMLPLFLPAGVTFD--- 246

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 +F+   I +S + AA++AE+VR GL A+P+GQ E A +LGL + +   L++LPQ
Sbjct: 247 ------KFLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMGLIVLPQ 300

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFI 373
           A+R +IP + + ++ + K++SL + +   DL+ V     +    A        ++   F+
Sbjct: 301 ALRLVIPGIVNTFIGMFKDTSLVLIISMFDLLGVVKQNFSDANWATPQTARSGLVFAAFV 360

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +      ++    K+
Sbjct: 361 FWLFCFGMSRYSMYTERRLDTGHKR 385


>gi|261212507|ref|ZP_05926792.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC341]
 gi|260838438|gb|EEX65094.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC341]
          Length = 229

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F   G       F+S  IALS   A++ A+ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFLLTGEFIEISPFISGVIALSLIFASYAAQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPAHAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSIQ 219


>gi|89899771|ref|YP_522242.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89344508|gb|ABD68711.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 222

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 16/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR---LSRHFHEKTGKALPL 221
           + F +      L      +     + + +  L IV          L+  +  K  + +  
Sbjct: 1   MDFTLGQFLHELWIARAPIVQGLGVTIVAAALAIVTGSILGVGVGLALTYGAKPLRWMTR 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y     I G P LVL+   Y +                     F +  +AL+ + ++ +
Sbjct: 61  AYTDF--IRGTPVLVLVLASYYI-----------LGAAGVQLSPFQAGVLALAVFCSSHV 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVR  L A+P GQ+EAA A+GLT  +    +LLPQA+R ++P   +    ++K S+L 
Sbjct: 108 GEIVRGALQAIPVGQIEAAKAIGLTFSQTFLYILLPQAIRQVLPTWVNTAAEMVKASTLL 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G  DL+     +I++T  ++       F+Y + +  I  F   +  K  +
Sbjct: 168 SIIGVGDLLLASQEVISRTFMSLPFYFFAGFLYFTANFAIEHFGRYVERKTKI 220



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 29/70 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T   A   ++  +I+G  VG       K + W+ R Y +  R  P LV++   
Sbjct: 19  IVQGLGVTIVAAALAIVTGSILGVGVGLALTYGAKPLRWMTRAYTDFIRGTPVLVLVLAS 78

Query: 149 YKSVLSVLPI 158
           Y  + +    
Sbjct: 79  YYILGAAGVQ 88


>gi|325519342|gb|EGC98767.1| amino acid ABC transporter, permease protein [Burkholderia sp.
           TJI49]
          Length = 231

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 11/238 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +  +   L    +       +    F  G+ +++   RLS +     G        
Sbjct: 1   MDLSVLSSYGALLMLGVLTTVKLLVISAVFGFGLAIAVAFARLSPNPLVARGSK-----A 55

Query: 225 STFLIFGLPTLVLIALKYQ----LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            T +I G P LV I L Y     L    P L   + +    +   F  +  AL     A+
Sbjct: 56  FTEVIRGTPLLVQIYLIYYGVGSLFAGWPALR--DSVLWPFLRDGFWYVAFALVISVGAY 113

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E++R+GL  VP+G++EAA A+G+      R V LP+A++ ++P L  + + +LK+++L
Sbjct: 114 VGEVLRAGLRGVPKGEIEAARAMGMRPSMIARRVWLPRAIQILLPTLAGETVMMLKSTAL 173

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A  V   D++     I  QT +  E +L    IY+ L+ +I     RL  ++ ++  +
Sbjct: 174 ASTVAVMDVLGAANYIRAQTLRTYEPLLAIAVIYVVLAFLIERVFGRLERRVPVRMPR 231



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 38/98 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SSY   +++G + T  L     +    +   V   RLS N LVA   + + EV R  P L
Sbjct: 7   SSYGALLMLGVLTTVKLLVISAVFGFGLAIAVAFARLSPNPLVARGSKAFTEVIRGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
           V I+ +Y  V S+              FL +       
Sbjct: 67  VQIYLIYYGVGSLFAGWPALRDSVLWPFLRDGFWYVAF 104


>gi|262191303|ref|ZP_06049496.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae CT 5369-93]
 gi|262032799|gb|EEY51344.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           cholerae CT 5369-93]
          Length = 246

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK-------PVLGQFNF 256
             R     +    + +P L +   + FG   L+   L +   F         P      +
Sbjct: 46  WARAIATLYTTIIRGIPDLVLMMLIFFGGQILLNNGLSWFNEFINQWLIARDPNHEWVAY 105

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F++  + +     A++AE  R  ++AV +G++EAA A G++   + R +LL
Sbjct: 106 LPDYVDISPFVAGVLTIGFIFGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILL 165

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R  IP   + +L LLK ++L   +G  D+V +       T       +    I+L 
Sbjct: 166 PQMIRHAIPGFGNNWLVLLKTTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLF 225

Query: 377 LSIMIALFMNRLNAKIALKEK 397
            + +    +  L  K ++  +
Sbjct: 226 FTSVSTGLLKLLERKFSIHTR 246


>gi|163795108|ref|ZP_02189076.1| polar amino acid uptake family ABC transporter, permease protein
           [alpha proteobacterium BAL199]
 gi|159179506|gb|EDP64035.1| polar amino acid uptake family ABC transporter, permease protein
           [alpha proteobacterium BAL199]
          Length = 239

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 7/240 (2%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
             P    ++   +  F   R +    +T+  +     FS ++G+V +             
Sbjct: 2   TTPETGINLTYFYDSFDRARMIGGFFMTIWLSLVCLFFSTIIGVVGAWLQG-----SRFV 56

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + +   YI  F       LV +   +    +     +  +     +   F    ++LS
Sbjct: 57  WTRRIAQGYIQLFRNTPP--LVQMYFFFFALGNLLPRVKNEYGYLEPLFDNFTWAAVSLS 114

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +  AF  EI RSG+ AVP    EAA ALG    +A   ++LP A R  +P L +  +NL
Sbjct: 115 FFAGAFNVEIFRSGIEAVPESTREAAEALGYNRLQAYLYIVLPLAFRVCLPALNNNLVNL 174

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +K ++LA A+   +L+ V   I + +    E+++  + +Y++L  ++   M+R    I +
Sbjct: 175 VKTTTLAYAIAVPELLYVSNQIWSDSVNVPEMMVTLLVLYVALVGLLVWGMHRWERAIRV 234



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 1/111 (0%)

Query: 83  SSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S+  A ++ GF  T WL+   +  +TIIG +    + S       I + Y+++FRN PP
Sbjct: 15  DSFDRARMIGGFFMTIWLSLVCLFFSTIIGVVGAWLQGSRFVWTRRIAQGYIQLFRNTPP 74

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           LV ++F + ++ ++LP   +       +F N    +           + +F
Sbjct: 75  LVQMYFFFFALGNLLPRVKNEYGYLEPLFDNFTWAAVSLSFFAGAFNVEIF 125


>gi|285808423|gb|ADC35949.1| putative amino acid ABC transporter permease/substrate binding
           protein [uncultured bacterium 98]
          Length = 133

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/127 (36%), Positives = 69/127 (54%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F++  I L    AA+ +EI R  L+AVPRGQ++AA  LGLT R+  RLV  PQA R 
Sbjct: 1   MPAFLAALIGLGLNYAAYESEIYRGALLAVPRGQLDAARTLGLTERQILRLVRGPQAFRL 60

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            + P+T+ ++ LLK+SSL   +   +L        +  G  +    +   +YL LS+ +A
Sbjct: 61  ALAPMTNDFIALLKDSSLVSVITVVELTKQTSIFASNIGSWVVPGAMCAAMYLVLSLPLA 120

Query: 383 LFMNRLN 389
               R+ 
Sbjct: 121 RLARRIE 127


>gi|190891791|ref|YP_001978333.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190697070|gb|ACE91155.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 227

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 88/172 (51%), Gaps = 3/172 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G+ +   Y+  F+  G P LV + L Y          Q   + G    P +    +AL
Sbjct: 42  EIGRTITRTYV--FVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFFREP-YWCAVLAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  TAA+ +EI R GL+AV   ++EAA A G++     R ++LP A+R  +P   ++ + 
Sbjct: 99  TLNTAAYCSEIFRGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGNEIIL 158

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           ++K ++LA  +   ++  + G +I  + +A EI ++   IYL++  ++   +
Sbjct: 159 MIKATALASVITIMEVTGLAGKLIADSFRAFEIFIVAGAIYLAIIFIVTRML 210


>gi|126731795|ref|ZP_01747599.1| amino acid ABC transporter, permease protein [Sagittula stellata
           E-37]
 gi|126707622|gb|EBA06684.1| amino acid ABC transporter, permease protein [Sagittula stellata
           E-37]
          Length = 231

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 90/219 (41%), Gaps = 2/219 (0%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                 +     + + S    +V  L A  + + F  +  + L   Y +TF+      ++
Sbjct: 9   WLLIDGLKLTLFVAIASMAGALVFGLLA-AIGKLFAPRPARILIDTY-TTFVRGVPELVL 66

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+ + Y +      + +   +  +     F++    L+   AAF  E+ R+   AVP GQ
Sbjct: 67  LLIIYYGVPTLVQNVSRDLGVPITLSINPFVAGIGTLTLIYAAFACEVYRAAYAAVPVGQ 126

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALGL+     R V LPQ MR  +P L + ++ ++K ++L   +   +L+      
Sbjct: 127 REAAYALGLSRAVTFRKVELPQMMRYALPGLGNVWMVVVKATALISIIQLPELMRNADIA 186

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              T Q          +YL+++ +      RL    A  
Sbjct: 187 ARSTRQPFTFFFAACLLYLAITAISMWGQGRLERWAARG 225



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 40/92 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   ++ G   T ++A + M  A + G L   G+L A +    +   Y    R +P L
Sbjct: 5   DGFGWLLIDGLKLTLFVAIASMAGALVFGLLAAIGKLFAPRPARILIDTYTTFVRGVPEL 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           V++  +Y  V +++      + +P  + +N  
Sbjct: 65  VLLLIIYYGVPTLVQNVSRDLGVPITLSINPF 96


>gi|157369455|ref|YP_001477444.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157321219|gb|ABV40316.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 224

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 10/219 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+       VF  + G +L++      R    K       LY++ F     
Sbjct: 14  PYLLQGLLITLKITVTAIVFGILWGTILAVM-----RLSPFKPISWFAALYVNLFRSVP- 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV++ L + L    P L Q             +S  +A S + AA+ +EI+R+G+I++
Sbjct: 68  --LVMVLLWFYL--VVPSLLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGIISI 123

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ  AA+ALG++H ++ +LV+LPQA R+++P L +Q + L +++SL   +  AD    
Sbjct: 124 SRGQSSAALALGMSHWQSMKLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRT 183

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             TI  + G  +E+IL   F+Y  +S+  +  ++ L  +
Sbjct: 184 ASTIGERDGTQVEMILFAGFVYFVISLAASALVSYLKKR 222



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 39/68 (57%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G + T  +  + ++   + GT++   RLS  K ++W   +YV +FR++P ++V+ +
Sbjct: 15  YLLQGLLITLKITVTAIVFGILWGTILAVMRLSPFKPISWFAALYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVLSV 155
            Y  V S+
Sbjct: 75  FYLVVPSL 82


>gi|307129009|ref|YP_003881025.1| membrane protein of an ABC superfamily putative amino-acid
           transporter [Dickeya dadantii 3937]
 gi|306526538|gb|ADM96468.1| membrane component of an ABC superfamily predicted amino-acid
           transporter [Dickeya dadantii 3937]
          Length = 364

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 78/414 (18%), Positives = 150/414 (36%), Gaps = 72/414 (17%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNL---- 57
           +     +     +R                I   +LT+  LW +  +   +    +    
Sbjct: 3   MITHTPSNPTPINRAIVW----ARRNLFSSITNSVLTLACLWLLWTLIPPLLNWAILKAN 58

Query: 58  ----------SLGIGFLSERAGF-EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIP 106
                     S G  ++   A F +   G+ P         A+++  ++         I 
Sbjct: 59  WIGSTRADCTSDGACWVFIHARFEQFMYGLYPREELWRINFALVLALIS---------IL 109

Query: 107 ATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
                 L   GR             Y+ V+  I PL+  + L+     +  +        
Sbjct: 110 PMFWRNLPHRGR-------------YIAVWCVIYPLIAWWLLFGGFGGLTRVETRQ---- 152

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                        TLT+   A     +  LGI+L+L      R  +    +AL +++I  
Sbjct: 153 ---------WGGLTLTIIIAAIGIAGALPLGILLAL-----GRRSNMPVLRALCVIFIEF 198

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +    L T++ ++           +    F+   T   + +   + +  + +A++AE+VR
Sbjct: 199 WRGVPLITVLFMS----------SVMLPLFLTEGTNIDKLLRALVGVILFQSAYVAEVVR 248

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL A+P+GQ EAA +L L + +   LV+LPQA++ +IP L +  + L K++SL + +G 
Sbjct: 249 GGLQALPKGQYEAAQSLALGYWRMQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGL 308

Query: 347 ADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            DL S            G + E  +    +Y      ++ +   L  +     K
Sbjct: 309 FDLFSSIQQATVDPAWLGMSTEGYVFAAILYWIFCFSMSRYSQHLEKRFDTGRK 362


>gi|330960989|gb|EGH61249.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 220

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    + + G ++ + A  L+  +     +    
Sbjct: 1   MYQPPGWLHEVWTAREVLWSGFLTSIQCSALAILFGTLIGMCAG-LTLTYGGFFARLPVR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL            +               F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVLAVFYMVPALGWQI-------------SAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR  L A+PRGQ+EA  A+GL   +  R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 AEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIKLLGRQIEKRVAL 219


>gi|16264163|ref|NP_436955.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|307299986|ref|ZP_07579771.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti BL225C]
 gi|307316661|ref|ZP_07596104.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti AK83]
 gi|15140288|emb|CAC48815.1| EhuC [Sinorhizobium meliloti 1021]
 gi|306897859|gb|EFN28602.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti AK83]
 gi|306904875|gb|EFN35458.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti BL225C]
          Length = 219

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 13/189 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       +AL   YI  F   G    V +   Y           F            
Sbjct: 38  LGRLSRFMAVRALATTYIEFF--RGTSIFVQLFWVY-----------FVLPFAGITLTPL 84

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  +AL     A+ AE+VR  + A+ R Q EA IAL LT  +A R ++LPQA+  ++P 
Sbjct: 85  QAGVLALGLNVGAYGAEVVRGAVKAIGREQREACIALNLTRFQAMRHIVLPQALPLMLPT 144

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +  + LLK +++   +  +D+      +  QTG  +      + +Y  ++ +I+L M 
Sbjct: 145 FGNNAIELLKGTAVVSLISLSDMTFQAQVVRAQTGSTLIPFATILLLYFVMAWLISLGMR 204

Query: 387 RLNAKIALK 395
            L  +++  
Sbjct: 205 WLERRVSRG 213



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 29/73 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  L   G   A ++    G GRLS    V  +   Y+E FR     V 
Sbjct: 7   YIGLILQGAWVTVQLTLMGSALAVVVAFAAGLGRLSRFMAVRALATTYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLP 157
           +F++Y  +     
Sbjct: 67  LFWVYFVLPFAGI 79


>gi|312962619|ref|ZP_07777109.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311283199|gb|EFQ61790.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 232

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +   +  L    L            F L   L L   R+S+   +        L
Sbjct: 1   MIFDYNVIWESMPLYLDGLLTTLKLLAISLFFGLLAALPLGLMRVSK---QPIVNGAAWL 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           Y  T++I G P LV + L Y        L QF  +  S + P          +A +  T+
Sbjct: 58  Y--TYVIRGTPMLVQLFLIYY------GLAQFEAVRESFLWPLLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPNGEIEAAKAMGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYITAGAFYLCLTFILVRLFKLAERR 222



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 39/119 (32%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           I  Y          L G + T  L    +    +    +G  R+S   +V     +Y  V
Sbjct: 2   IFDYNVIWESMPLYLDGLLTTLKLLAISLFFGLLAALPLGLMRVSKQPIVNGAAWLYTYV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            R  P LV +F +Y  +     + +  +            L+F   T    A+I   S 
Sbjct: 62  IRGTPMLVQLFLIYYGLAQFEAVRESFLWPLLSSATFCACLAFAINTSAYTAEIIAGSL 120


>gi|225350816|ref|ZP_03741839.1| hypothetical protein BIFPSEUDO_02386 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158272|gb|EEG71514.1| hypothetical protein BIFPSEUDO_02386 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 218

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 14/232 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F          F     +    I VF  VL IV+ L    +         K +  +YI 
Sbjct: 1   MFDWTFVTHYAPFFVSGAEMTLFISVFGIVLSIVVGLICASI-EIARIPVLKQIVRVYIE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L    P LV +   Y L+F  P L          V        + L     +++AE +
Sbjct: 60  --LSRNTPLLVQL---YFLYFGLPKL--------GVVWSAEQCAIVGLGFLGGSYMAEAM 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL  +P  Q E+A  LGL+  +    V++PQA+ + IP + +  + L+K SS+  A+ 
Sbjct: 107 RGGLETIPTVQRESAYVLGLSQWQTLSRVVIPQAISTSIPGIVANVIFLIKESSVVSAIA 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            AD++ +   +I       E +L+ +  YL + + I+LF   L  +   + +
Sbjct: 167 LADVMYMAKDLIGMYYNTYESLLMLVVAYLVILLPISLFGTWLERRFDYERR 218



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 40/71 (56%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T +++  G++ + ++G +  +  ++   ++  I RVY+E+ RN P LV 
Sbjct: 10  YAPFFVSGAEMTLFISVFGIVLSIVVGLICASIEIARIPVLKQIVRVYIELSRNTPLLVQ 69

Query: 145 IFFLYKSVLSV 155
           ++FLY  +  +
Sbjct: 70  LYFLYFGLPKL 80


>gi|16764040|ref|NP_459655.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56414208|ref|YP_151283.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|167550799|ref|ZP_02344555.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|167990672|ref|ZP_02571772.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168240512|ref|ZP_02665444.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168465840|ref|ZP_02699722.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168820212|ref|ZP_02832212.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194450507|ref|YP_002044698.1| glutamate/aspartate ABC transporter permease GltK [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|197264070|ref|ZP_03164144.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197363131|ref|YP_002142768.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|198245682|ref|YP_002214651.1| glutamate/aspartate ABC transporter permease GltK [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200390497|ref|ZP_03217108.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|16419176|gb|AAL19614.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56128465|gb|AAV77971.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|194408811|gb|ACF69030.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|195631617|gb|EDX50137.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197094608|emb|CAR60130.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|197242325|gb|EDY24945.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197940198|gb|ACH77531.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602942|gb|EDZ01488.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|205324183|gb|EDZ12022.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205330901|gb|EDZ17665.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205339786|gb|EDZ26550.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205343124|gb|EDZ29888.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|261245935|emb|CBG23737.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267992397|gb|ACY87282.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157263|emb|CBW16751.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|312911695|dbj|BAJ35669.1| glutamate/aspartate ABC transporter permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320084936|emb|CBY94725.1| Inner membrane amino-acid ABC transporter permease protein yecS
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321226242|gb|EFX51293.1| Glutamate Aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323128980|gb|ADX16410.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326622406|gb|EGE28751.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 224

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 108/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + ++GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIIPSLPYLLAGLVITLKITVTAVIVGIVWGTILAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + +I   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVIVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|261822383|ref|YP_003260489.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261606396|gb|ACX88882.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 246

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             LS   +T+  +   ++ +F++G +  +  T  +R        + +  + +PL+     
Sbjct: 24  WILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLSSIGTCYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+ + +      +     QF           F+S  I L  +TAA + E VR+
Sbjct: 84  WYLVVPELLPVNIGMWFKAELDPNIQF-----------FLSSMICLGLFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+PPLTS+ LNL+KNS++A  +G  
Sbjct: 133 GIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M  +  K  L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIMQVVERKTRL 239



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   IL G   T  L+    I A +IG+L G 
Sbjct: 3   IDWNWGIFLQAAPFG----------NTTYLGWILSGLQVTVTLSICAWIIAFLIGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ I   YVE+FRN+P +V  F  Y  V  +LP+     
Sbjct: 53  LRTVPNRFLSSIGTCYVELFRNVPLIVQFFTWYLVVPELLPVNIGMW 99


>gi|239831829|ref|ZP_04680158.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239824096|gb|EEQ95664.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 240

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 2/229 (0%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                   F  +   +     +     + + +  +G+ L  F   + +   E + +    
Sbjct: 2   EHYATLLSFGPDGWGASIAWGLLVTVSLALATLPVGLALG-FLVAVGKQSSEPSIRLAAN 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y + F       L L  + +        L     +  +     F +  +AL    +++ 
Sbjct: 61  IYTTIFRGL-PELLTLFLVYFGASLGLQRLLSLFGVEANVEINAFGAGMVALGFVFSSYS 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+  S   A+PRGQ E   A+GL+H +  R V+LPQ +R  +P L + +L LLK++SL 
Sbjct: 120 SEVFLSAFRAIPRGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANLWLVLLKDTSLV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +  +D++         T +      I   +YL L+I+ + F++R+  
Sbjct: 180 SVITLSDILRQTSIAARVTKEPFLFFGIACLLYLVLAIISSYFIDRIAR 228



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 69/190 (36%), Gaps = 8/190 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +  +I  G + T  LA + +     +G LV  G+ S+   +     +Y  +FR +P L
Sbjct: 13  DGWGASIAWGLLVTVSLALATLPVGLALGFLVAVGKQSSEPSIRLAANIYTTIFRGLPEL 72

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +F +Y      L            +F     +          A  FVFS     V  L
Sbjct: 73  LTLFLVYFGASLGLQR-------LLSLFGVEANVEINAFGAGMVALGFVFSSYSSEVF-L 124

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
            A R       + G A+ L +  T     LP L+ IAL    +    +L   + +   T+
Sbjct: 125 SAFRAIPRGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANLWLVLLKDTSLVSVITL 184

Query: 263 SPEFMSLYIA 272
           S       IA
Sbjct: 185 SDILRQTSIA 194


>gi|254247529|ref|ZP_04940850.1| Amino acid ABC transporter [Burkholderia cenocepacia PC184]
 gi|124872305|gb|EAY64021.1| Amino acid ABC transporter [Burkholderia cenocepacia PC184]
          Length = 237

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R   +K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKKKWLSGAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +     +  +          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQAVRGTPML-DAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 PFTMYRRVILPSALRRALPLYSNEVIVMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     +   +
Sbjct: 203 FGIAALLYLVISFTLVWLFRQAERR 227



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y    + G   T WL    +     +   +   R+S  K ++    +
Sbjct: 5   IQEYWRNYLYTDGYR---ITGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|325263519|ref|ZP_08130253.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. D5]
 gi|324031228|gb|EGB92509.1| amino acid ABC transporter, permease/substrate-binding protein
           [Clostridium sp. D5]
          Length = 224

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 98/234 (41%), Gaps = 18/234 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           + +   F     +  L    +T+   A   V   VLG V++L     SR       +   
Sbjct: 7   YRLNFNFLNVYGDMLLDGMKMTVIIVAWCLVIGLVLGTVMALLKQSKSR-----ILRMAA 61

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +Y+   ++   P LV +   +   +  P L           +    +  IAL   T+A 
Sbjct: 62  TVYVD--ILRNTPFLVQLFFFF---YGLPAL--------GIQTDAMATAIIALGINTSAQ 108

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             EI+R+GL+AV +   E + ALG T  +     +LP + R     L + ++NL+  SS+
Sbjct: 109 NCEIIRAGLLAVKKDYYECSEALGYTKIQTLWYFVLPISFRLAFKSLVNNFINLVLTSSV 168

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++   + +     I+ +T +  EI L+ +  Y   + +I+     ++ KI +
Sbjct: 169 CFSITVVETMGAAKIIVGRTSRPFEIYLMILLCYCIFTYIISFIAKFIDRKIHI 222



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 41/88 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  +    ++   ++GT++   + S ++++     VYV++ RN P LV 
Sbjct: 17  YGDMLLDGMKMTVIIVAWCLVIGLVLGTVMALLKQSKSRILRMAATVYVDILRNTPFLVQ 76

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +FF +  + ++    D        + +N
Sbjct: 77  LFFFFYGLPALGIQTDAMATAIIALGIN 104


>gi|306833383|ref|ZP_07466510.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424153|gb|EFM27292.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 213

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + V S   G +L+            K  + L  LY+  +++ G P L
Sbjct: 12  LDGAKVTLQVFCIVIVLSIPFGAILAFLMQ-----IKFKPLQWLLTLYV--WIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                 V     +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGIVMDRLPAAILAFTLNYAAYFAEIFRGGIAAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +    ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + +   IYL +  ++ L   +   K 
Sbjct: 174 AANRDA-TLAPMFVAGAIYLLMIGVVTLISKQTEKKF 209



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +   G ++        K + W+  +YV + R  P L+ + F 
Sbjct: 11  LLDGAKVTLQVFCIVIVLSIPFGAILAFLMQIKFKPLQWLLTLYVWIMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV  + D          LN              A 
Sbjct: 71  YYVLPSVGIVMDRLPAAILAFTLNYAAYFAEIFRGGIAAI 110


>gi|237732154|ref|ZP_04562635.1| arginine transporter permease subunit ArtM [Citrobacter sp. 30_2]
 gi|226907693|gb|EEH93611.1| arginine transporter permease subunit ArtM [Citrobacter sp. 30_2]
          Length = 222

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S V+ +VL+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIVVALVLALIFTVI---LTLKTPVLVWLVRAYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPALQEYPVLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E +
Sbjct: 179 LLYGRTYDVM-VFGAAGVIYLIVNGLLTLMMRLIERKALAFEHR 221



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 40/114 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + ++ A ++  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIVVALVLALIFTVILTLKTPVLVWLVRAYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPALQEYPVLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|331683979|ref|ZP_08384575.1| histidine transport system permease protein HisQ [Escherichia coli
           H299]
 gi|331078931|gb|EGI50133.1| histidine transport system permease protein HisQ [Escherichia coli
           H299]
          Length = 228

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D++         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVLKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|238853596|ref|ZP_04643965.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
 gi|238833740|gb|EEQ26008.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
          Length = 214

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 15/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L           +IF ++ V+ I L L       H + K  KA+   Y+  ++I 
Sbjct: 4   YIFSILPSLFSGAWLTIEIFFWTTVVSIPLGLLV-AFGLHSNLKLVKAILKFYV--WIIR 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   +                   V P + +  +A     AA+ AEI R GL 
Sbjct: 61  GTPLLLQLIFIFY-----------GLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQ 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ EAA  LGL+  +    ++ PQ ++ ++P + ++ +NL+K+SSL   +G  DL+
Sbjct: 110 AVPVGQFEAAQVLGLSRLQTINRIVRPQVVKIVLPSIGNELINLVKDSSLVYVIGLGDLL 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G     +    +  +++   +YL+++ ++   +  +  K
Sbjct: 170 RAGNVATARDVSLVP-LVLVGCVYLAMTAVLTALLRVVEKK 209



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S   ++  G   T  + F   + +  +G LV  G  S  KLV  I + YV + R  P L+
Sbjct: 7   SILPSLFSGAWLTIEIFFWTTVVSIPLGLLVAFGLHSNLKLVKAILKFYVWIIRGTPLLL 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            + F++  + +V  +            +N              A   
Sbjct: 67  QLIFIFYGLPTVGIVFPRYEAALVAFIINYAAYFAEIFRGGLQAVPV 113


>gi|227113890|ref|ZP_03827546.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 247

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 106/224 (47%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
                  +T+  +    V S VLG +L+       R        +    +  PLL    F
Sbjct: 20  WLWHGFLITLGISLSTIVLSTVLGFLLAAARDSQIRVLRGVVVAYSSLFRNTPLLVQLFF 79

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG   L   A+   L  + P          +  S EF++    L+ Y++AFIAE +RS
Sbjct: 80  WYFGAGQLFPSAMMQWL--NTPHALSLLGTTLAWPSFEFLAGLAGLTLYSSAFIAEEIRS 137

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V RGQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSL +A+G A
Sbjct: 138 GVRGVARGQKYAAHALGLTGWQSMRYVVLPQALKIALPPLLGQYMNIVKNSSLTMAIGVA 197

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +  +T +  +   +   +Y+ +  ++  +      +
Sbjct: 198 ELSYASRQVETETLRTFQAFGVATVLYIVIIAVMEGWGMWRQQR 241



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 42/90 (46%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q +  +     Y   +  GF+ T  ++ S ++ +T++G L+ A R S  +++  +   Y 
Sbjct: 6   QSLESWLLAPQYLLWLWHGFLITLGISLSTIVLSTVLGFLLAAARDSQIRVLRGVVVAYS 65

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            +FRN P LV +FF Y     + P      
Sbjct: 66  SLFRNTPLLVQLFFWYFGAGQLFPSAMMQW 95


>gi|329666943|gb|AEB92891.1| glutamine ABC transporter permease component [Lactobacillus
           johnsonii DPC 6026]
          Length = 216

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFVLG+V         ++     G    
Sbjct: 2   ENFIHAYSWINIRFLLQGLWVTIYVSLISIALSFVLGLVFGFIRYVKIKYLSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          ++   ++  IAL  +  A 
Sbjct: 58  ------FVIDIIRNLPLLLIIFFTYFGLPEL--------GIITNPTVASIIALVVFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ AV  GQME A + G+T+ +A   V++PQA+  +IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIAAVDPGQMEGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   +++    L +K 
Sbjct: 164 ATIIVLPELLFHAQIIYSQNTTYLIPMYVIIAIMYFIVCFSLSMVAKHLQSKY 216



 Score = 43.4 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 35/76 (46%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T +++   +  + ++G + G  R    K ++ I    +++ RN+P 
Sbjct: 9   SWINIRFLLQGLWVTIYVSLISIALSFVLGLVFGFIRYVKIKYLSAIVGFVIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           L++IFF Y  +  +  
Sbjct: 69  LLIIFFTYFGLPELGI 84


>gi|289672926|ref|ZP_06493816.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. syringae FF5]
          Length = 226

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS + G+   +  +   R            L I   L   +P LV + L +   F
Sbjct: 35  LLAIVFSSLGGLCYGVLRSLGKRWLEVP-------LRIYLELFRAIPVLVWLYLFF---F 84

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL 
Sbjct: 85  GLPIFLGLSI-------PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLG 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  VG  II +T +++ I
Sbjct: 138 LGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQQIIERTYESVLI 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   ++     L  +
Sbjct: 198 YGFLFLFFFIVCYPLSAASRVLERR 222



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ +++ G   G  R    + +    R+Y+E+FR IP LV ++  
Sbjct: 23  LITGAGRTLGISLLAIVFSSLGGLCYGVLRSLGKRWLEVPLRIYLELFRAIPVLVWLYLF 82

Query: 149 YKSVL 153
           +  + 
Sbjct: 83  FFGLP 87


>gi|169829526|ref|YP_001699684.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168994014|gb|ACA41554.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 235

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 17/220 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVL 237
                      V+GI+++    +  +      +F+    +  P++     + FGLP LV 
Sbjct: 24  FMTFTPVFLGIVIGIMVAFVRIKQIKFLTPFLNFYVSFFRGTPIIMHIMLVDFGLPMLV- 82

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
                       V+  F+    S+  P    + +A +    A+ +EI+RSG+++VP+GQ+
Sbjct: 83  ----------DGVVNTFHLSFQSSSIPILFFVILAFTFSAGAYASEIIRSGILSVPKGQL 132

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A+GLT  +A R  +LPQA    IP  T+ ++  L  +SLA  +   +L  V   + 
Sbjct: 133 EAAYAIGLTFTQAMRRYVLPQAFGKSIPNFTNVFIGFLHATSLAFFLSIKELTGVANIVA 192

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   + +E  +    IY  +SI+     +R+  ++    K
Sbjct: 193 SVNLKFLEAFIAVGIIYWGISIITESISHRIEKRVMAYSK 232


>gi|22537749|ref|NP_688600.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76787814|ref|YP_330227.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798453|ref|ZP_00780691.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|22534640|gb|AAN00473.1|AE014265_2 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76562871|gb|ABA45455.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76586187|gb|EAO62707.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
          Length = 221

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 103/231 (44%), Gaps = 14/231 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    F + L  +        +     + +  F+LG ++  F   L +  H +  + L  
Sbjct: 3   NWDAIFNLELAVKAFPSVIQGLPYTIGLSLVGFILGAIVGFFV-ALMKMSHFRLLRYLAN 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           ++IS  L+ G+P +VL+ L Y           F             +  +  +  ++A+I
Sbjct: 62  IHIS--LMRGIPLMVLLFLIY-----------FGLPFIGIQLDAVTASIVGFTMMSSAYI 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+ L+AV  GQ EAA ALGL      R +++PQA R  +P L++  L+++K+SSL 
Sbjct: 109 SEIIRAALLAVDHGQWEAARALGLKTPTIYRGIIIPQATRIALPSLSNVLLDMVKSSSLT 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   D+ +    +       +   ++   IY  +  + A+  +    ++
Sbjct: 169 AMITVPDIFNNAKIVGGTYSDYMTAYILVALIYWVICTLYAIIQDWWEKRL 219



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 41/98 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L+  G I   I+G  V   ++S  +L+ ++  +++ + R IP +V++F +Y
Sbjct: 21  IQGLPYTIGLSLVGFILGAIVGFFVALMKMSHFRLLRYLANIHISLMRGIPLMVLLFLIY 80

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             +  +    D       G  + +       +     A
Sbjct: 81  FGLPFIGIQLDAVTASIVGFTMMSSAYISEIIRAALLA 118


>gi|330817216|ref|YP_004360921.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327369609|gb|AEA60965.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 218

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L   +      L    +T++     FV S ++G+  +L     +R         +   
Sbjct: 1   MSLQNLLDFLPILLKGAIVTVEITVCSFVLSTLIGLAFALMRVSPNRLLSGGAAAVIN-- 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I GLP +V +   + ++F  P L              F +  I L    +A+ A
Sbjct: 59  -----VIRGLPIIVQL---FYIYFVLPDL--------GVQLSAFQAGCIGLGIAYSAYQA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ A+ RGQ+EAA ++G+      R V+LPQA R  +PP  +  + +LK+SSLA 
Sbjct: 103 ENFRAGIEAIDRGQIEAAQSIGMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLAS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIIL 368
            +  A++   G  I + T Q + +  
Sbjct: 163 TITVAEMTRAGQLIASSTFQNMTVYT 188



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +     + +T+IG      R+S N+L++      + V R +P +V +F++
Sbjct: 13  LLKGAIVTVEITVCSFVLSTLIGLAFALMRVSPNRLLSGGAAAVINVIRGLPIIVQLFYI 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YFVLPDLGVQ 82


>gi|191170156|ref|ZP_03031710.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           F11]
 gi|306814580|ref|ZP_07448742.1| ABC-type arginine transport system permease [Escherichia coli
           NC101]
 gi|190909672|gb|EDV69257.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           F11]
 gi|305851974|gb|EFM52426.1| ABC-type arginine transport system permease [Escherichia coli
           NC101]
 gi|324006682|gb|EGB75901.1| arginine/ornithine transport protein [Escherichia coli MS 57-2]
 gi|324013190|gb|EGB82409.1| arginine/ornithine transport protein [Escherichia coli MS 60-1]
          Length = 228

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIGAS-GKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +  +G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGASGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|311107044|ref|YP_003979897.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 13 [Achromobacter
           xylosoxidans A8]
 gi|310761733|gb|ADP17182.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 13
           [Achromobacter xylosoxidans A8]
          Length = 251

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 7/193 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE- 265
           ++R    +  +A   +Y+  F    +P +V + L Y   F  P L            P+ 
Sbjct: 52  VARTLPSRGVRAAAAVYVEVF--RNIPLIVQMFLWY---FVLPELLPTAAGDWIKQLPDA 106

Query: 266 -FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  +A+  Y +A I E +R+G+ A+P+GQ  A +ALGLT  +  R VLLP A+R+++
Sbjct: 107 SFYTAALAIGMYMSARIGEQLRAGIEALPQGQRNAGLALGLTLPQLYRHVLLPNALRTVL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P +TS  LN +KN+S+A+ +G A+L +    +   + Q  E  L     YL+L++++ + 
Sbjct: 167 PTMTSDCLNTIKNTSVALTIGLAELTAQAHAMQEFSFQVFEAFLTATMAYLALNLIVIVV 226

Query: 385 MNRLNAKIALKEK 397
           M  L  K+ +  +
Sbjct: 227 MRALEYKLRIPGR 239



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 37/85 (43%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               +Y   +L G   T   A    + A  +G  VG  R   ++ V     VYVEVFRNI
Sbjct: 16  DGGQTYLQTLLDGLSVTVKTAALAWLIALALGLAVGVARTLPSRGVRAAAAVYVEVFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIV 164
           P +V +F  Y  +  +LP      +
Sbjct: 76  PLIVQMFLWYFVLPELLPTAAGDWI 100


>gi|241666824|ref|YP_002984908.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862281|gb|ACS59946.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 234

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +F  S + G +L+L      R        +    YI  F+  G P L
Sbjct: 10  LVTLLKAVPTTLILFSLSILTGGLLALVI-VWMRTSGNPVLSSFAKGYI--FIFRGSPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + + L +        LGQF FI  S + P      +   ++L+  TA + AEI R G+ A
Sbjct: 67  IQMFLVFY------GLGQFGFIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRA 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V   ++EAA ++G++     R +L P A R  +P  +++ + ++K+++LA  V   ++  
Sbjct: 121 VSPKEIEAARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTG 180

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V   +I+QT + +E+ L    IYL L+ +I   M  L   ++   +
Sbjct: 181 VAQRLISQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRR 226


>gi|153009566|ref|YP_001370781.1| polar amino acid ABC transporter inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151561454|gb|ABS14952.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 240

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 2/229 (0%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                   F  +   +     +     + + +  +G+ L  F   + +   E + +    
Sbjct: 2   EHYATLLSFGPDGWGASIAWGLLVTVSLALATLPVGLALG-FLVAIGKQSTEPSIRLASN 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y + F       L L  + +        L     I  +     F +  +AL    +++ 
Sbjct: 61  IYTTIFRGL-PELLTLFLVYFGASLGLQRLLSLFGIEANVEINAFGAGMVALGFVFSSYS 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E+  S   A+PRGQ E   A+GL+H +  R V+LPQ +R  +P L + +L LLK++SL 
Sbjct: 120 SEVFLSAFRAIPRGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANLWLVLLKDTSLV 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +  +D++         T +      I   +YL L+I+ + F+NR+  
Sbjct: 180 SVITLSDILRQTSIAARVTKEPFLFFGIACLLYLVLAIISSYFINRIAR 228



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 68/190 (35%), Gaps = 8/190 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +  +I  G + T  LA + +     +G LV  G+ S    +     +Y  +FR +P L
Sbjct: 13  DGWGASIAWGLLVTVSLALATLPVGLALGFLVAIGKQSTEPSIRLASNIYTTIFRGLPEL 72

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + +F +Y      L            +F     +          A  FVFS     V  L
Sbjct: 73  LTLFLVYFGASLGLQR-------LLSLFGIEANVEINAFGAGMVALGFVFSSYSSEVF-L 124

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
            A R       + G A+ L +  T     LP L+ IAL    +    +L   + +   T+
Sbjct: 125 SAFRAIPRGQYEGGYAVGLSHWQTMRKVILPQLIRIALPGLANLWLVLLKDTSLVSVITL 184

Query: 263 SPEFMSLYIA 272
           S       IA
Sbjct: 185 SDILRQTSIA 194


>gi|262403804|ref|ZP_06080362.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC586]
 gi|262350308|gb|EEY99443.1| arginine ABC transporter permease protein ArtQ [Vibrio sp. RC586]
          Length = 229

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 4/167 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y        L    FI  S     F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLFLITGEFIEIS----PFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           DL+         T +A         +YL ++++    +  ++ K ++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSI 218


>gi|227890382|ref|ZP_04008187.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|268319112|ref|YP_003292768.1| hypothetical protein FI9785_623 [Lactobacillus johnsonii FI9785]
 gi|227849196|gb|EEJ59282.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus johnsonii ATCC 33200]
 gi|262397487|emb|CAX66501.1| unnamed protein product [Lactobacillus johnsonii FI9785]
          Length = 216

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SFVLG+V         ++     G    
Sbjct: 2   ENFIHAYSWINIRFLLQGLWVTIYVSLISIALSFVLGLVFGFIRYVKIKYLSAIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          ++   ++  IAL  +  A 
Sbjct: 58  ------FVIDIIRNLPLLLIIFFTYFGLPEL--------GIITNPTIASIIALVVFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ AV  GQME A + G+T+ +A   V++PQA+  +IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIAAVDPGQMEGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   +++    L +K 
Sbjct: 164 ATIIVLPELLFHAQIIYSQNTTYLIPMYVIIAVMYFIVCFSLSMVAKHLQSKY 216



 Score = 43.4 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 35/76 (46%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T +++   +  + ++G + G  R    K ++ I    +++ RN+P 
Sbjct: 9   SWINIRFLLQGLWVTIYVSLISIALSFVLGLVFGFIRYVKIKYLSAIVGFVIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           L++IFF Y  +  +  
Sbjct: 69  LLIIFFTYFGLPELGI 84


>gi|68249724|ref|YP_248836.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           86-028NP]
 gi|68057923|gb|AAX88176.1| arginine transport system permease protein [Haemophilus influenzae
           86-028NP]
          Length = 227

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K  K+   LY++ F   G P LV   L Y            +      +S  +    +A
Sbjct: 42  NKWIKSAVNLYLTLFT--GTPLLVQFFLIYAGP--GQFQWIIDSPLWYVLSNAWFCAVLA 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+  +AA+  ++    + A+P+GQ E+  ALGL+  +    +L+P A++  +P  +++ +
Sbjct: 98  LALNSAAYSTQLFHGAVKAIPKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEII 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + K ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+
Sbjct: 157 LVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216

Query: 393 ALKEK 397
              E+
Sbjct: 217 LAFER 221


>gi|307730183|ref|YP_003907407.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307584718|gb|ADN58116.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 237

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 88/218 (40%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + V S  +G  +++    ++R   ++       LY  T++  G P
Sbjct: 14  YWDGQRMSGLAVTLWLLVASVGIGFCVAIPL-AVARVSKKRWLSTPVRLY--TYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + L Y   +    +     +  +     F    +A +  T A+  EI    + +  
Sbjct: 71  LYVQLLLIYTGMYSLEFVRSHQLLD-AFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTS 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R +++P A+R  +P  +++ + +L  +++A      D++ V 
Sbjct: 130 HGEVEAARAYGMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + T Q+ +   +   IYL +S  +     R   +
Sbjct: 190 RDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERR 227



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVASVGIGFCVAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHS 162
             + S+  +  H 
Sbjct: 80  TGMYSLEFVRSHQ 92


>gi|222148882|ref|YP_002549839.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735868|gb|ACM36831.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 395

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 18/257 (7%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATR 206
               + L +     V+ F +     GL            + +     GI +SL       
Sbjct: 149 FKGTNALLLFLVLPVVSFFLLTGGFGLEHVETARWGGLMVTLILSFFGIAVSLPVGIMLA 208

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       K L +++I       L T VL      L    P    F+         + 
Sbjct: 209 LGRRSTMPVIKMLCVIFIEVVRGVPLIT-VLFMASVMLPLFLPDGWSFD---------KL 258

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +   + +S +++A++AE++R GL A+P+GQ E A +LGL++ +  RL++LPQA++ +IP 
Sbjct: 259 LRALVGVSIFSSAYMAEVIRGGLQAIPKGQFEGADSLGLSYWQKIRLIVLPQAIKLVIPG 318

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMI 381
           + + ++ L K++SL   +G  DL+ +    ++ +       A+  ++   FIY      +
Sbjct: 319 IVNTFIGLFKDTSLVSIIGMFDLLGIVILNLSDSNWATPETAVTGLVFAGFIYWLFCFSM 378

Query: 382 ALFMNRLNAKIALKEKK 398
           + +   +   +    K 
Sbjct: 379 SRYSYFMERHLDTGHKH 395



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 38/79 (48%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           TA   G + T  L+F G+  +  +G ++  GR S   ++  +C +++EV R +P + V+F
Sbjct: 180 TARWGGLMVTLILSFFGIAVSLPVGIMLALGRRSTMPVIKMLCVIFIEVVRGVPLITVLF 239

Query: 147 FLYKSVLSVLPIPDHSIVL 165
                +   LP       L
Sbjct: 240 MASVMLPLFLPDGWSFDKL 258


>gi|254718863|ref|ZP_05180674.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           sp. 83/13]
 gi|265983848|ref|ZP_06096583.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306837634|ref|ZP_07470504.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
 gi|264662440|gb|EEZ32701.1| polar amino acid ABC transporter [Brucella sp. 83/13]
 gi|306407283|gb|EFM63492.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. NF 2653]
          Length = 385

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   +S    V     ++  +   + PL++     K + ++L   
Sbjct: 92  ACWAFVNAKYEQFLYGRYPISERWRVDLTALIFAAL---LVPLLIPKVPKKGLNAILFFL 148

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +V  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 149 VFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L +++I       L T++ +A      F  P               + +   I ++ +
Sbjct: 209 KTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +             ++   F++      ++ +   +  +
Sbjct: 319 DTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 378

Query: 392 IALKEKK 398
           +    K+
Sbjct: 379 LDTGHKR 385



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|186476548|ref|YP_001858018.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184193007|gb|ACC70972.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 237

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  +G V S+    ++R   ++       LY  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASIGIGFVASIPL-AVARVSKKRWLSTPVRLY--TYVFRGTPLYVQLLLIYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +     +  +     F    +A +  T A+  EI    + A P G++EAA A G
Sbjct: 82  MYSLEFVRSHALLD-AFFRSGFHCAILAFALNTCAYTTEIFAGAIRATPHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R +++P A+R  +P  +++ + +L  +++A      D++ V     + T ++ 
Sbjct: 141 MSWLTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTATVPDVLKVARDANSATYRSF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E   +   IYL++S  +     R    
Sbjct: 201 EAFGLAALIYLAVSFALVALFRRAERH 227



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASIGIGFVASIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDH 161
             + S+  +  H
Sbjct: 80  TGMYSLEFVRSH 91


>gi|295699403|ref|YP_003607296.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438616|gb|ADG17785.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 218

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + + +LY+  F   G P L+ + L +   F  P++              + +
Sbjct: 42  RVSPIAWLRRIVVLYVEVF--QGTPLLMQLFLAF---FGLPLI--------GIDVSPWAA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R ++ PQA++  + P  
Sbjct: 89  ATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFGQQLRYIVWPQALKIAVAPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K+++LA  +GF +L   G  I N   +   I  +   IY ++   +  +   L
Sbjct: 149 GFLVQVVKSTALASIIGFIELTKTGTMITNAAFRPFPIYGMVAMIYFAMCFPLTWYARVL 208

Query: 389 NAKIALKEKK 398
             +  + + +
Sbjct: 209 EKRQKVGQHR 218



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 37/105 (35%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L+    T  L+    +   ++G ++ A R+S    +  I  +YVEVF+  P L
Sbjct: 7   WDIARNLLLAARWTVLLSLIAFVGGGVVGLVLLAMRVSPIAWLRRIVVLYVEVFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  +             + L               A
Sbjct: 67  MQLFLAFFGLPLIGIDVSPWAAATVTLTLYTSAYLVDIWRGCVEA 111


>gi|224827114|ref|ZP_03700210.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224600623|gb|EEG06810.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 243

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 5/207 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++  +S + G+ LS+    L R    +       LY  T++  G P LV + + Y  
Sbjct: 32  LTLELLFYSLLGGLALSIPLG-LMRVSRNRLVSGAVWLY--TYVFRGTPMLVQLFIIYYG 88

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 + +      + +   +    +A +  TAA+  EI+   +     G++EAA A+G
Sbjct: 89  LSQFEAVRE--SWAWTYLQEAYFCALLAFTLNTAAYTTEIIAGQIRNTHWGEIEAAKAMG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R +++P A+R  +P  +++ + +L+ +S+A  V  AD+  V   I + T    
Sbjct: 147 MSKWLMMRRIVIPAALRRALPAYSNEVVMMLQGTSIAGLVTLADVTGVARRIYSDTYMPF 206

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E  L+   IYL+ + +          +
Sbjct: 207 EPFLMAGLIYLAFTFLFVWLFKLAEKR 233



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 33/75 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L F  ++    +   +G  R+S N+LV+    +Y  VFR  P LV +F +Y  
Sbjct: 29  GLILTLELLFYSLLGGLALSIPLGLMRVSRNRLVSGAVWLYTYVFRGTPMLVQLFIIYYG 88

Query: 152 VLSVLPIPDHSIVLP 166
           +     + +      
Sbjct: 89  LSQFEAVRESWAWTY 103


>gi|310768127|gb|ADP13077.1| putative ABC transport system, inner membrane component [Erwinia
           sp. Ejp617]
          Length = 299

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 112/265 (42%), Gaps = 6/265 (2%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P  +    +   +L+++                +   +   L+      +   +  L  V
Sbjct: 15  PLRLFGAAIALFILAIVVQSVAFNPRWEWSVFAHWFFAPAILSGLGQTLLLTLTASLLSV 74

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIG 258
           L      L+R         L   YI  F    L  +++I   +  L+    +   F  + 
Sbjct: 75  LLGVLLALARLSPSWLLSGLAFSYIWLFRSLPLIVVLIILYNFSYLYDRLSLGVPFTPLT 134

Query: 259 GSTVSP-----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            +T        +F +  I L+   AA+ AEIVR G+  V  GQ EAA ALGL   + T  
Sbjct: 135 LATWKTIDVLGQFSTAVIGLTLVQAAYTAEIVRGGIAGVDHGQFEAAAALGLPSSRRTLR 194

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQA+R+IIP   ++ ++L K +++   +   +L      + N+T Q I ++++    
Sbjct: 195 IILPQALRAIIPGAFNEIISLAKGTAMVYVLAMPELFYTIQMVYNRTQQVIPLLMVAAVW 254

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           YL ++ ++++  + +   +A    +
Sbjct: 255 YLLITTLLSVVQHYVERWLARGTTR 279


>gi|271500408|ref|YP_003333433.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343963|gb|ACZ76728.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 224

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 8/170 (4%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L +  F+     T VLI L    ++  PVL              F +  +AL+ YTAA+ 
Sbjct: 55  LPVMAFVELFRNTPVLIQLI-WFYYALPVLTGLQL-------STFGAAVLALTLYTAAYS 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI R+GL ++ + Q E A ALG+++  A R V+LPQ ++ ++P LT++ + L K +SLA
Sbjct: 107 TEIFRAGLQSMEQSQWEGAKALGMSYPLALRRVILPQVLQRMLPALTNRLIELAKVTSLA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +   +L+  G  + + T + +EI+ +    Y  L    +    RL  +
Sbjct: 167 SMLAVNELMYQGRLLSSDTYRPLEILTVVALFYFVLIWPGSYLAARLERR 216


>gi|257067919|ref|YP_003154174.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256558737|gb|ACU84584.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 219

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 90/235 (38%), Gaps = 16/235 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
              +                            V   ++ +VL L    + R        +
Sbjct: 1   MTPNTSWWDWDHAAAVLPKLLLEGFKVTLIATVLGTLIALVLGLMVAIIRRS--APKLLS 58

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            P  ++  F I   P +V +                N +    V    +     L  +  
Sbjct: 59  TPFTWVVEF-IRMTPLVVQLVFA-------------NLVLSPYVDSTLVIGIWVLGIHYT 104

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            ++AE+ R+G+ +VP GQ EAA AL L   +  R V++PQA+R+ +P L +  +++ K +
Sbjct: 105 TYMAEVYRAGIDSVPTGQWEAATALSLPRVRTWRAVVVPQAIRNTLPALGNYAISMFKET 164

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              V +   +LV V     +   +  E I +   I+L+ S   +L + RL  K+A
Sbjct: 165 PFFVVIYIPELVRVAQQYGSSYFRYTEAITLAGLIFLAASYPTSLLIRRLEKKLA 219



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T      G + A ++G +V   R SA KL++      VE  R  P +V + F 
Sbjct: 21  LLEGFKVTLIATVLGTLIALVLGLMVAIIRRSAPKLLSTPFTWVVEFIRMTPLVVQLVFA 80

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG 175
              +   +       +   G+      
Sbjct: 81  NLVLSPYVDSTLVIGIWVLGIHYTTYM 107


>gi|227544223|ref|ZP_03974272.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908218|ref|ZP_07125684.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|227185794|gb|EEI65865.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300894645|gb|EFK88001.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
          Length = 215

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 19/210 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  V S  LGI++SL  T   +           +L I  +L+ G P L+ +   + 
Sbjct: 22  QIFFWTLVGSLPLGILVSLGLTSKIKPLKW-------VLEIYVWLMRGTPLLLQLIFVF- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++          V   + +  +A     AA+ AEI R G  +V +GQ EAA  L
Sbjct: 74  --YGLPII--------GIVFERYDAALVAFILNYAAYFAEIFRGGFQSVDQGQFEAARVL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            L++ +  R +++PQ ++ +IP + ++ +NL+K+SSL   +G  DL+  G    ++    
Sbjct: 124 RLSYWQTLRKIIIPQVIKIVIPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVATSRD-VT 182

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  +++   IYL L  +  L + ++    A
Sbjct: 183 LVPLMLVGLIYLILVGICTLILRQVEKCYA 212



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 38/91 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S    ++  G   T  + F  ++ +  +G LV  G  S  K + W+  +YV + R  P L
Sbjct: 7   SEILPSLFQGAALTLQIFFWTLVGSLPLGILVSLGLTSKIKPLKWVLEIYVWLMRGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + + F++  +  +  + +          LN 
Sbjct: 67  LQLIFVFYGLPIIGIVFERYDAALVAFILNY 97


>gi|76574840|gb|ABA47314.1| probable amino acid permease PA2202 [Pseudomonas cichorii]
          Length = 228

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 11/220 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F      ++P   +   A   + S + G++ ++    L        G+     +I   ++
Sbjct: 10  FTYLMVGAYPDGPLGGAALTLILSLLSGVLAAVLGLVLGVSLVLVRGRTR---WILLGVL 66

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                + ++ L +  +F  P+L        +   P   ++  ALS    A++A  V SG+
Sbjct: 67  GFFRAIPVVMLIFWTYFLLPILF-------NVDVPALFTVVCALSLIGGAYLAHSVHSGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +++  GQ  AA ALG++  +  RL++LPQA+  ++P   +Q+++L+K++SLA  +G  +L
Sbjct: 120 LSLSSGQWAAAKALGMSPWQVLRLIILPQALPIMLPSFLNQWISLIKDTSLAYVIGVGEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRL 388
             V   + N+      EI L    +Y  +   + L  NRL
Sbjct: 180 SFVATQVSNRVMVYPTEIFLFIALVYFIICSALDLVANRL 219


>gi|116629194|ref|YP_814366.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri ATCC 33323]
 gi|238853887|ref|ZP_04644250.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
 gi|282851027|ref|ZP_06260401.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311111028|ref|ZP_07712425.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus gasseri MV-22]
 gi|116094776|gb|ABJ59928.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus gasseri ATCC 33323]
 gi|238833473|gb|EEQ25747.1| ABC-type amino acid transport system, permease component
           [Lactobacillus gasseri 202-4]
 gi|282557979|gb|EFB63567.1| ABC transporter, permease protein [Lactobacillus gasseri 224-1]
 gi|311066182|gb|EFQ46522.1| amino acid ABC transporter, amino acid-binding/permease protein
           [Lactobacillus gasseri MV-22]
          Length = 216

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 19/233 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SF+LG+V         ++     G    
Sbjct: 2   ENFIHAYSWINIRFLLQGLWVTIYVSLISIALSFILGLVFGFIRYVKIKYLSAVVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+   ++  IAL  +  A 
Sbjct: 58  ------FVIDIIRNLPLLLIIFFTYFGLPEL--------GIVTNPTVASIIALVVFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ AV  GQME A + G+T+ +A   V++PQA+  +IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIAAVDPGQMEGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A  +   +L+     I +Q T   I + +I   +Y  +   +++    L +K 
Sbjct: 164 ATIIVLPELLFHAQIIYSQNTTYLIPMYVIIAIMYFIVCFSLSMIAKHLQSKY 216



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 35/76 (46%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T +++   +  + I+G + G  R    K ++ +    +++ RN+P 
Sbjct: 9   SWINIRFLLQGLWVTIYVSLISIALSFILGLVFGFIRYVKIKYLSAVVGFVIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           L++IFF Y  +  +  
Sbjct: 69  LLIIFFTYFGLPELGI 84


>gi|260567564|ref|ZP_05838034.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|260157082|gb|EEW92162.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
          Length = 314

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 14/261 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR   P      +   + +   I      + F +             + TN  I + + +
Sbjct: 67  FRRTCPSGSPVSVTARMTNHPTITSKETTMDFSVSALGGAFPQLLPAIGTNLVISIIAMI 126

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L ++     T L R        A+  + IS   I G P LV I L Y   +  P L    
Sbjct: 127 LALIGGTALTIL-RTLGIAPLNAVIGVVISF--IRGTPILVQIFLFY---YGLPAL---- 176

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G  +SP   +  +A++  ++ FI EI+R GL  +  G +EAAIALG+  +     V+
Sbjct: 177 ---GLDLSP-IQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWTKVI 232

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ    I+PPL ++   ++K ++L   +   +++     + N + + +E +L    I  
Sbjct: 233 LPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETLLCAAIILF 292

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           +++++++     L  + A + 
Sbjct: 293 AVNLVLSQCGRVLEMRFAARR 313



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 8/191 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L        ++   MI A I GT +   R      +  +  V +   R  P LV IF  
Sbjct: 110 LLPAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISFIRGTPILVQIFLF 169

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFAT 205
           Y  + ++             +  N+       +       ++     +  LGI   +  T
Sbjct: 170 YYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWT 229

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           ++     +   + +P L      I     L+ +    ++      +   +F    T+   
Sbjct: 230 KV--ILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETL--- 284

Query: 266 FMSLYIALSCY 276
             +  I  +  
Sbjct: 285 LCAAIILFAVN 295


>gi|315222682|ref|ZP_07864571.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
 gi|315188368|gb|EFU22094.1| ABC transporter, permease protein [Streptococcus anginosus F0211]
          Length = 268

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T+     + V S  LGIV+S       +  H        L+ I  +++ G P L
Sbjct: 67  LNGALVTLQVFVLVLVLSIPLGIVISFLMQVHFKLLHW-------LINIYIWIMRGTPLL 119

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA +   AA+ AEI R G++++P G
Sbjct: 120 LQLIFIYYV-----------LPSIGVRLDRLPAAIIAFTLNYAAYFAEIFRGGILSIPAG 168

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  T  +  R ++LPQ ++ ++P + ++ + L+K++SL  A+G +DL+    T
Sbjct: 169 QYEAAKVLKFTPFQTIRFIILPQVVKVVLPSVFNEVMTLVKDTSLVYALGVSDLILASRT 228

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             N+      +  I   IYL L  ++ +   ++  + +
Sbjct: 229 AANRDASLAPMF-IAGAIYLVLIGLVTIVSKQVEKRYS 265


>gi|256375588|ref|YP_003099248.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255919891|gb|ACU35402.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 290

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 21/259 (8%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L ++ F+                      +    +S    T+   A   V + VLG VL+
Sbjct: 29  LGIVAFIGYRFYDSGQFEPRMWEWMQYETVQLELISRLGNTLSAFAVASVAALVLGAVLA 88

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
             A RLS H   +            FL+     + L+ + +  +F  P +          
Sbjct: 89  --AGRLSEHAFWRIPAG--------FLVEVFRAIPLLIMIFIFYFGLPTID--------I 130

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              +F ++ + L+ Y  + +AE+ R+G+ ++PRGQ EAA ALG+   +    VLLPQA+R
Sbjct: 131 KMSQFTAVVLGLTLYNGSVLAEVFRAGVASLPRGQAEAAYALGMRKTQVMTQVLLPQALR 190

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI--INQTGQAI-EIILIWMFIYLSLS 378
           +++P + SQ + LLK+++L   + + +L+     +    Q G+ +  + ++   IY++L 
Sbjct: 191 AMLPAIISQLVVLLKDTALGFIINYKELLDYTKYLGTQGQFGRPLVPMTIVTGAIYVALC 250

Query: 379 IMIALFMNRLNAKIALKEK 397
           +++  F   L  +    +K
Sbjct: 251 LLLTWFAVWLEKRNRRSKK 269



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++    NT        + A ++G ++ AGRLS +          VEVFR IP L++IF  
Sbjct: 62  LISRLGNTLSAFAVASVAALVLGAVLAAGRLSEHAFWRIPAGFLVEVFRAIPLLIMIFIF 121

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + ++         +  G+ L N
Sbjct: 122 YFGLPTIDIKMSQFTAVVLGLTLYN 146


>gi|121610493|ref|YP_998300.1| Fis family transcriptional regulator [Verminephrobacter eiseniae
           EF01-2]
 gi|121555133|gb|ABM59282.1| transcriptional regulator, Fis family [Verminephrobacter eiseniae
           EF01-2]
          Length = 221

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 13/219 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              F    +     + V S V  I+  L  T L R +  +  + L + YI +  +  +P 
Sbjct: 11  NWRFFATGLGVTVVLSVISAVSSILAGLVITLL-RLYGPRWLRPLLVFYIDS--MRAIPV 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV++     ++F  P+L   NF         F +  +AL+ + AA+ AE++R+G+ ++  
Sbjct: 68  LVVLV---WIYFAFPILVGLNF-------APFWAALVALTLHIAAYAAEVIRAGIESIRP 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ  AA+ALG++  +  R VLLPQA   ++P   S     +K++++A  +   +L+    
Sbjct: 118 GQTRAALALGMSRAQILRKVLLPQATIRMLPAFGSILTMAIKDTAIASVIAVPELMHKAE 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           T+  Q+ + +E+    M  Y  +   +   ++RL  ++A
Sbjct: 178 TVAGQSYRPVEVSSAVMLAYFLILFPVTRGVDRLYQRLA 216



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 36/88 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++  +        G   T  L+    + + + G ++   RL   + +  +   Y++  
Sbjct: 3   LDFSPIAENWRFFATGLGVTVVLSVISAVSSILAGLVITLLRLYGPRWLRPLLVFYIDSM 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           R IP LVV+ ++Y +   ++ +      
Sbjct: 63  RAIPVLVVLVWIYFAFPILVGLNFAPFW 90


>gi|326793192|ref|YP_004311013.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326543956|gb|ADZ85815.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 224

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L      +    ++F  + +  I L +    + R    K  + +   YI   L+ 
Sbjct: 14  YTKMMLPQMMEGLGVTLQVFALTLIFAIPLGILV-AVCRLSRFKVLRKIMEFYI--LLMR 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ I   +       +             P   +  +A S   AA+ AEI R+G+ 
Sbjct: 71  GTPLLLQIIFIFFGFPILNI-----------AIPRMPAALLAFSLNYAAYFAEIFRAGIS 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ E A  LGL+ +     ++LPQA + ++PP+ ++ + L+K+++L  AVGF DL+
Sbjct: 120 SIDQGQYEGAEVLGLSKQDTFFRIILPQAFKRVLPPIANEVITLVKDTALVYAVGFDDLL 179

Query: 351 SVGGTIINQTGQAIEIILIW 370
            +G T  N+    + ++L+ 
Sbjct: 180 KIGKTATNRDASLLPLVLVA 199



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +    +I A  +G LV   RLS  K++  I   Y+ + R  P L+ I F+
Sbjct: 22  MMEGLGVTLQVFALTLIFAIPLGILVAVCRLSRFKVLRKIMEFYILLMRGTPLLLQIIFI 81

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +     +               LN 
Sbjct: 82  FFGFPILNIAIPRMPAALLAFSLNY 106


>gi|238898835|ref|YP_002924517.1| arginine transport protein (ABC superfamily, membrane) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229466595|gb|ACQ68369.1| arginine transport protein (ABC superfamily, membrane) [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 222

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 10/223 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +++   A    F+  L IVL+L         H     ++  +Y++ F   G P L
Sbjct: 9   LNGLQISVTLTAFSLFFALGLSIVLTLILG-----LHRPFLSSIVKIYLTLFT--GTPLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I L Y      P L    ++      P ++   +AL+  +AA+  ++    L A+P G
Sbjct: 62  IQIFLIYYGPGQFPSLRSCAWLWHFLSQP-WLCAMMALTLNSAAYTTQLFYGALRALPVG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  ALG++  +A   VLLP A++  +   +++ + + K++SL   +   DL+     
Sbjct: 121 QWEACQALGMSKTQAL-RVLLPFALKRALSSYSNEVVLIFKSTSLVYTITLMDLMGYTQL 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I  +T   I+  L    IY  ++ ++ L M  +  K    E++
Sbjct: 180 IYGRTYD-IKAFLAVGIIYFCINGVLTLLMRFVERKGLAFERR 221


>gi|302525505|ref|ZP_07277847.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
 gi|302434400|gb|EFL06216.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
          Length = 294

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 19/262 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V+   +  ++++ +           G        +     +       V +F LG VL++
Sbjct: 22  VLGIVVVAALIAFIVYRFIDSGQFAGRKWEWLQYAQVQSDLANAVLATVKAFALGAVLAI 81

Query: 203 FATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
               +    R       +      + TF++     + L+ L +  ++  P L       G
Sbjct: 82  VFGAVFAAGRLSDHAWVRG-----VCTFVVEFFRAIPLLILMFLFYYGLPTL-------G 129

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
              SP F ++ + L+ Y  + +AE+ R+G++A+P+GQ EAA ALG+   +    VLLPQA
Sbjct: 130 VDTSPLF-AVVLGLTLYNGSVLAEVFRAGILALPKGQSEAAYALGMRKTQVMFTVLLPQA 188

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAI-EIILIWMFIYLS 376
           +R+++P + SQ + LLK+++L   V + +L+     I +Q   G+ I    L+   IY++
Sbjct: 189 LRAMLPTIISQLVVLLKDTALGFLVTYPELLYYARYIGSQGAFGRPIVPSTLVAAAIYIA 248

Query: 377 LSIMIALFMNRLNAKIALKEKK 398
           + +++      L  +    +K 
Sbjct: 249 MCLLLTALATYLERRNRRSKKH 270



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 18/152 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R+ +    ++  +++  +  + V    ++ + +                     + Y  
Sbjct: 13  ARMRHRLYAVLGIVVVAALIAFIVYRFIDSGQFAGRK---------------WEWLQYAQ 57

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S    +    + T      G + A + G +  AGRLS +  V  +C   VE FR IP 
Sbjct: 58  VQS---DLANAVLATVKAFALGAVLAIVFGAVFAAGRLSDHAWVRGVCTFVVEFFRAIPL 114

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           L+++F  Y  + ++         +  G+ L N
Sbjct: 115 LILMFLFYYGLPTLGVDTSPLFAVVLGLTLYN 146


>gi|222102718|ref|YP_002539757.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221739319|gb|ACM40052.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 228

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 9/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +F+ S + G +L+L    L R    K  +   + ++ +F   G P LV + + Y 
Sbjct: 17  QTTIVLFLASAITGNLLAL-PVALGRISTRKWIRYPVIGFMLSF--RGTPLLVQLYIFYF 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSL----YIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                 VL     I  S + P   S     Y+ LS  TAA+ AEI R  ++ +P GQ EA
Sbjct: 74  G--VGQVLATVPAIRYSPLWPLLRSANGYAYVVLSLNTAAYCAEIWRGAILGLPIGQSEA 131

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             +LGL+ ++ T  +LLPQA R  +P +  Q + LLK ++L  A+   + ++    +  Q
Sbjct: 132 GRSLGLSKQRITVSILLPQAFRLALPAIGGQNILLLKGTALTAAITVFETMATANLVRAQ 191

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           T +  E +L    +Y  L+ +I      +  ++A +
Sbjct: 192 TFRTYEPLLAAALVYFVLASIITSGFKYMETRLASR 227


>gi|167565680|ref|ZP_02358596.1| histidine transport system permease protein [Burkholderia
           oklahomensis EO147]
          Length = 237

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 90/229 (39%), Gaps = 8/229 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                 +F +   LS   +T+          F L + L++     +R             
Sbjct: 7   QYWQNYLFSDGYRLSGLAITLWLLVVSIGLGFCLAVPLAIARASRNRLLSRAV------- 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++ T++  G P  V + L Y   +   V+    ++  S          +A +    A+  
Sbjct: 60  WLYTYVFRGTPLYVQLLLCYTGIYSLNVVHDHAWLD-SFFRSAMNCTLLAFTLNECAYAT 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI    + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA 
Sbjct: 119 EIFAGAIKSTSPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAF 178

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 179 TATVPDILKVTRDVNSATYASFQAYGIAAVLYAVVVFGLIWLFRRMEAR 227



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    L G   T WL    +     +   +   R S N+L++    +
Sbjct: 5   IGQYWQNYLFSDGYR---LSGLAITLWLLVVSIGLGFCLAVPLAIARASRNRLLSRAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLNVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|116333854|ref|YP_795381.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099201|gb|ABJ64350.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 213

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 19/209 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + +  LGI++ L  T        +      L+ I  +L+ G P L+ +   +  
Sbjct: 21  IFFWTIIVAIPLGILVGLGMT-------TRFKPLTWLINIYVWLMRGTPLLLQLIFVFYG 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                V+ Q            + +   A      A+ AEI R GL A+P GQ E+A  L 
Sbjct: 74  LPIIGVVFQ-----------RYDAALFAFILNYTAYFAEIFRGGLQAIPVGQYESARVLR 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G   +++    +
Sbjct: 123 LTRWQTLRRIVIPQVVKIVLPSIGNEVINLIKDSSLVYVIGLGDLLRAGNVAMSRD-VTL 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +++   IYL L+ +  + + RL    +
Sbjct: 182 VPLVLVGVIYLLLTAVCTIVLKRLEKHYS 210



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 39/102 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  + F  +I A  +G LVG G  +  K + W+  +YV + R  P L+ + F+
Sbjct: 11  LVSGTGMTLSIFFWTIIVAIPLGILVGLGMTTRFKPLTWLINIYVWLMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +  +  +  +        F   LN              A   
Sbjct: 71  FYGLPIIGVVFQRYDAALFAFILNYTAYFAEIFRGGLQAIPV 112


>gi|26248696|ref|NP_754736.1| histidine transport system permease hisQ [Escherichia coli CFT073]
 gi|74312825|ref|YP_311244.1| histidine transport system permease [Shigella sonnei Ss046]
 gi|82777719|ref|YP_404068.1| histidine transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|91211604|ref|YP_541590.1| histidine transport system permease hisQ [Escherichia coli UTI89]
 gi|117624498|ref|YP_853411.1| histidine transport system permease protein HisQ [Escherichia coli
           APEC O1]
 gi|157158838|ref|YP_001463652.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E24377A]
 gi|157161795|ref|YP_001459113.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           HS]
 gi|170019383|ref|YP_001724337.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170680291|ref|YP_001744508.1| histidine ABC transporter permease HisQ [Escherichia coli SMS-3-5]
 gi|188495755|ref|ZP_03003025.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           53638]
 gi|191169477|ref|ZP_03031211.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           B7A]
 gi|193062411|ref|ZP_03043506.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E22]
 gi|193068273|ref|ZP_03049237.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E110019]
 gi|194429462|ref|ZP_03061985.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           B171]
 gi|209919808|ref|YP_002293892.1| histidine ABC transporter permease [Escherichia coli SE11]
 gi|215487521|ref|YP_002329952.1| histidine/lysine/arginine/ornithine transporter subunit HisQ,
           membrane component of ABC superfamily [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218554864|ref|YP_002387777.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli IAI1]
 gi|218559221|ref|YP_002392134.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli S88]
 gi|218690468|ref|YP_002398680.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli ED1a]
 gi|218695907|ref|YP_002403574.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli 55989]
 gi|218700784|ref|YP_002408413.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli IAI39]
 gi|218705838|ref|YP_002413357.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia coli UMN026]
 gi|227887366|ref|ZP_04005171.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein HisQ [Escherichia coli 83972]
 gi|237704785|ref|ZP_04535266.1| histidine transport system permease hisQ [Escherichia sp.
           3_2_53FAA]
 gi|256017534|ref|ZP_05431399.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily protein [Shigella sp. D9]
 gi|260856352|ref|YP_003230243.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O26:H11 str. 11368]
 gi|260869030|ref|YP_003235432.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O111:H- str. 11128]
 gi|291283549|ref|YP_003500367.1| ABC-type arginine transport system permease [Escherichia coli
           O55:H7 str. CB9615]
 gi|293405774|ref|ZP_06649766.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|293410665|ref|ZP_06654241.1| histidine ABC transporter [Escherichia coli B354]
 gi|293415600|ref|ZP_06658243.1| histidine transport system permease [Escherichia coli B185]
 gi|293446645|ref|ZP_06663067.1| histidine transport system permease [Escherichia coli B088]
 gi|298381457|ref|ZP_06991056.1| histidine ABC transporter [Escherichia coli FVEC1302]
 gi|300818089|ref|ZP_07098301.1| arginine/ornithine transport protein [Escherichia coli MS 107-1]
 gi|300822182|ref|ZP_07102324.1| arginine/ornithine transport protein [Escherichia coli MS 119-7]
 gi|300896990|ref|ZP_07115469.1| arginine/ornithine transport protein [Escherichia coli MS 198-1]
 gi|300903698|ref|ZP_07121613.1| arginine/ornithine transport protein [Escherichia coli MS 84-1]
 gi|300918520|ref|ZP_07135113.1| arginine/ornithine transport protein [Escherichia coli MS 115-1]
 gi|300924577|ref|ZP_07140539.1| arginine/ornithine transport protein [Escherichia coli MS 182-1]
 gi|300936886|ref|ZP_07151773.1| arginine/ornithine transport protein [Escherichia coli MS 21-1]
 gi|300983441|ref|ZP_07176590.1| arginine/ornithine transport protein [Escherichia coli MS 45-1]
 gi|301024139|ref|ZP_07187849.1| arginine/ornithine transport protein [Escherichia coli MS 69-1]
 gi|301049066|ref|ZP_07196050.1| arginine/ornithine transport protein [Escherichia coli MS 185-1]
 gi|301303230|ref|ZP_07209355.1| arginine/ornithine transport protein [Escherichia coli MS 124-1]
 gi|301328809|ref|ZP_07221854.1| arginine/ornithine transport protein [Escherichia coli MS 78-1]
 gi|307311131|ref|ZP_07590775.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|309784982|ref|ZP_07679615.1| histidine transport system permease protein hisQ [Shigella
           dysenteriae 1617]
 gi|309793191|ref|ZP_07687619.1| arginine/ornithine transport protein [Escherichia coli MS 145-7]
 gi|312967608|ref|ZP_07781823.1| histidine transport system permease protein hisQ [Escherichia coli
           2362-75]
 gi|312973432|ref|ZP_07787604.1| histidine transport system permease protein hisQ [Escherichia coli
           1827-70]
 gi|331663824|ref|ZP_08364734.1| histidine transport system permease protein HisQ [Escherichia coli
           TA143]
 gi|331669007|ref|ZP_08369855.1| histidine transport system permease protein HisQ [Escherichia coli
           TA271]
 gi|331673811|ref|ZP_08374574.1| histidine transport system permease protein HisQ [Escherichia coli
           TA280]
 gi|331678254|ref|ZP_08378929.1| histidine transport system permease protein HisQ [Escherichia coli
           H591]
 gi|26109101|gb|AAN81304.1|AE016763_263 Histidine transport system permease protein hisQ [Escherichia coli
           CFT073]
 gi|73856302|gb|AAZ89009.1| histidine transport system permease protein [Shigella sonnei Ss046]
 gi|81241867|gb|ABB62577.1| histidine transport system permease protein [Shigella dysenteriae
           Sd197]
 gi|91073178|gb|ABE08059.1| histidine transport system permease protein hisQ [Escherichia coli
           UTI89]
 gi|115513622|gb|ABJ01697.1| histidine transport system permease protein HisQ [Escherichia coli
           APEC O1]
 gi|157067475|gb|ABV06730.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           HS]
 gi|157080868|gb|ABV20576.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E24377A]
 gi|169754311|gb|ACA77010.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170518009|gb|ACB16187.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           SMS-3-5]
 gi|188490954|gb|EDU66057.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           53638]
 gi|190900479|gb|EDV60294.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           B7A]
 gi|192932077|gb|EDV84676.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E22]
 gi|192958552|gb|EDV88991.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           E110019]
 gi|194412523|gb|EDX28822.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           B171]
 gi|195183047|dbj|BAG66607.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli O111:H-]
 gi|209764894|gb|ACI80759.1| histidine transport system permease protein [Escherichia coli]
 gi|209913067|dbj|BAG78141.1| histidine ABC transporter permease component [Escherichia coli
           SE11]
 gi|215265593|emb|CAS09996.1| histidine/lysine/arginine/ornithine transporter subunit HisQ,
           membrane component of ABC superfamily [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218352639|emb|CAU98420.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli 55989]
 gi|218361632|emb|CAQ99226.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli IAI1]
 gi|218365990|emb|CAR03734.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli S88]
 gi|218370770|emb|CAR18583.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli IAI39]
 gi|218428032|emb|CAV17819.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli ED1a]
 gi|218432935|emb|CAR13829.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia coli UMN026]
 gi|222034064|emb|CAP76805.1| Histidine transport system permease protein hisQ [Escherichia coli
           LF82]
 gi|226901151|gb|EEH87410.1| histidine transport system permease hisQ [Escherichia sp.
           3_2_53FAA]
 gi|227835716|gb|EEJ46182.1| histidine ABC superfamily ATP binding cassette transporter,
           permease protein HisQ [Escherichia coli 83972]
 gi|257755001|dbj|BAI26503.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O26:H11 str. 11368]
 gi|257765386|dbj|BAI36881.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O111:H- str. 11128]
 gi|284922296|emb|CBG35381.1| histidine ABC transporter, permease protein [Escherichia coli 042]
 gi|290763422|gb|ADD57383.1| ABC-type arginine transport system, permease component [Escherichia
           coli O55:H7 str. CB9615]
 gi|291323475|gb|EFE62903.1| histidine transport system permease [Escherichia coli B088]
 gi|291427982|gb|EFF01009.1| histidine ABC transporter [Escherichia coli FVEC1412]
 gi|291433248|gb|EFF06227.1| histidine transport system permease [Escherichia coli B185]
 gi|291471133|gb|EFF13617.1| histidine ABC transporter [Escherichia coli B354]
 gi|294492902|gb|ADE91658.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           IHE3034]
 gi|298278899|gb|EFI20413.1| histidine ABC transporter [Escherichia coli FVEC1302]
 gi|300299113|gb|EFJ55498.1| arginine/ornithine transport protein [Escherichia coli MS 185-1]
 gi|300359171|gb|EFJ75041.1| arginine/ornithine transport protein [Escherichia coli MS 198-1]
 gi|300396683|gb|EFJ80221.1| arginine/ornithine transport protein [Escherichia coli MS 69-1]
 gi|300404280|gb|EFJ87818.1| arginine/ornithine transport protein [Escherichia coli MS 84-1]
 gi|300408529|gb|EFJ92067.1| arginine/ornithine transport protein [Escherichia coli MS 45-1]
 gi|300414334|gb|EFJ97644.1| arginine/ornithine transport protein [Escherichia coli MS 115-1]
 gi|300419208|gb|EFK02519.1| arginine/ornithine transport protein [Escherichia coli MS 182-1]
 gi|300457997|gb|EFK21490.1| arginine/ornithine transport protein [Escherichia coli MS 21-1]
 gi|300525312|gb|EFK46381.1| arginine/ornithine transport protein [Escherichia coli MS 119-7]
 gi|300529233|gb|EFK50295.1| arginine/ornithine transport protein [Escherichia coli MS 107-1]
 gi|300841404|gb|EFK69164.1| arginine/ornithine transport protein [Escherichia coli MS 124-1]
 gi|300844809|gb|EFK72569.1| arginine/ornithine transport protein [Escherichia coli MS 78-1]
 gi|306908637|gb|EFN39134.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|307554369|gb|ADN47144.1| histidine transport system permease protein HisQ [Escherichia coli
           ABU 83972]
 gi|307626155|gb|ADN70459.1| ABC-type arginine transport system permease [Escherichia coli
           UM146]
 gi|308123477|gb|EFO60739.1| arginine/ornithine transport protein [Escherichia coli MS 145-7]
 gi|308927352|gb|EFP72826.1| histidine transport system permease protein hisQ [Shigella
           dysenteriae 1617]
 gi|310332027|gb|EFP99262.1| histidine transport system permease protein hisQ [Escherichia coli
           1827-70]
 gi|312287805|gb|EFR15710.1| histidine transport system permease protein hisQ [Escherichia coli
           2362-75]
 gi|312946927|gb|ADR27754.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|315061601|gb|ADT75928.1| histidine/lysine/arginine/ornithine transporter subunit
           [Escherichia coli W]
 gi|315255245|gb|EFU35213.1| arginine/ornithine transport protein [Escherichia coli MS 85-1]
 gi|315292287|gb|EFU51639.1| arginine/ornithine transport protein [Escherichia coli MS 153-1]
 gi|320178717|gb|EFW53680.1| Histidine ABC transporter, permease protein HisQ [Shigella boydii
           ATCC 9905]
 gi|320199899|gb|EFW74488.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           EC4100B]
 gi|320657373|gb|EFX25175.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320663075|gb|EFX30392.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|323156459|gb|EFZ42614.1| histidine transport system permease protein hisQ [Escherichia coli
           EPECa14]
 gi|323161645|gb|EFZ47530.1| histidine transport system permease protein hisQ [Escherichia coli
           E128010]
 gi|323168520|gb|EFZ54200.1| histidine transport system permease protein hisQ [Shigella sonnei
           53G]
 gi|323171991|gb|EFZ57635.1| histidine transport system permease protein hisQ [Escherichia coli
           LT-68]
 gi|323176766|gb|EFZ62356.1| histidine transport system permease protein hisQ [Escherichia coli
           1180]
 gi|323187967|gb|EFZ73262.1| histidine transport system permease protein hisQ [Escherichia coli
           RN587/1]
 gi|323377818|gb|ADX50086.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323944821|gb|EGB40887.1| inner membrane transport system [Escherichia coli H120]
 gi|323952101|gb|EGB47975.1| inner membrane transport system [Escherichia coli H252]
 gi|323956074|gb|EGB51827.1| inner membrane transport system [Escherichia coli H263]
 gi|324020830|gb|EGB90049.1| arginine/ornithine transport protein [Escherichia coli MS 117-3]
 gi|324117814|gb|EGC11713.1| inner membrane transport system [Escherichia coli E1167]
 gi|331059623|gb|EGI31600.1| histidine transport system permease protein HisQ [Escherichia coli
           TA143]
 gi|331064201|gb|EGI36112.1| histidine transport system permease protein HisQ [Escherichia coli
           TA271]
 gi|331069084|gb|EGI40476.1| histidine transport system permease protein HisQ [Escherichia coli
           TA280]
 gi|331074714|gb|EGI46034.1| histidine transport system permease protein HisQ [Escherichia coli
           H591]
 gi|332088439|gb|EGI93557.1| histidine transport system permease protein hisQ [Shigella boydii
           5216-82]
 gi|332100894|gb|EGJ04240.1| histidine/lysine/arginine/ornithine transporter subunit [Shigella
           sp. D9]
          Length = 228

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|330966765|gb|EGH67025.1| arginine/ornithine ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 232

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           ++  + +  ++  L F  L M         +F L   L L   R+S++            
Sbjct: 1   MIFDYNVIWDSLPLYFGGLLMTFKLLAISLTFGLLAALPLGLMRVSKNPWVNMP-----A 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTA 278
           ++ T++I G P LV + L Y        L QF+ +  S   P          +A +  T+
Sbjct: 56  WLYTYVIRGTPMLVQLFLIYY------GLAQFSAVRESFFWPWLSSATFCACLAFAINTS 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+   L A P G++EAA A+G++  K  R +LLP A+R  +P  +++ + +L+ +
Sbjct: 110 AYTAEIIAGSLKATPAGEIEAARAMGMSKAKMYRRILLPSALRRALPQYSNEVIMMLQTT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+     T+  Q     E  +     YL L+ ++         +
Sbjct: 170 SLASIVTLIDITGAARTVNAQFYLPFEAYVTAGVFYLCLTFILVRLFKIAERR 222


>gi|86360896|ref|YP_472783.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284998|gb|ABC94056.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 219

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +     I + + + G VL +F   L+  +     + +   Y    +I G 
Sbjct: 10  WIARYVIMNGIAMTVSISLLAILAGSVLGVFVG-LALVYGGIVLRLIVRAYTD--IIRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y +              G  + P F +  +AL+ + ++ + EIVR  L A+
Sbjct: 67  PVLVLVLASYYVSAAV----------GLDLGP-FSAGVLALAVFCSSHVGEIVRGALQAI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G A+L+  
Sbjct: 116 PKGQTEAAKAIGLTFAQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 176 TQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 31/68 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I+ G   T  ++   ++  +++G  VG   +    ++  I R Y ++ R  P LV++  
Sbjct: 15  VIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGIVLRLIVRAYTDIIRGTPVLVLVLA 74

Query: 148 LYKSVLSV 155
            Y    +V
Sbjct: 75  SYYVSAAV 82


>gi|51891626|ref|YP_074317.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855315|dbj|BAD39473.1| amino acid ABC transporter permease protein [Symbiobacterium
           thermophilum IAM 14863]
          Length = 219

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 26/225 (11%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+  +A   VFSF LG +L +      R+        +  +YI +F     
Sbjct: 15  RFMLDGLLITLRISALTIVFSFFLGTLLGVM-----RYSGHWLFARIAAVYIESFR---- 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                           P++        +       S  +A++ +TAA + EIVR GL +V
Sbjct: 66  --------------ASPLILLILLFRFTMPMKPVDSGTLAMTLFTAAIVGEIVRGGLNSV 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA + G T  +  + ++LPQA+R +IPPLT Q++ ++K++S     G  +L   
Sbjct: 112 DKGQWEAARSQGFTWWQTMQHIVLPQALRKMIPPLTGQFITVVKDTSYVWVTGVQELTGK 171

Query: 353 GGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  I+     T Q   I      IY  L + I         +++ 
Sbjct: 172 GVIILGKHGSTVQFFAIFGTIGLIYYVLCLTINRIGLWQERRMSW 216



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +   ++      +L G + T  ++   ++ +  +GTL+G  R S + L A I  VY+E F
Sbjct: 5   LAVLAEWHNVRFMLDGLLITLRISALTIVFSFFLGTLLGVMRYSGHWLFARIAAVYIESF 64

Query: 137 RNIP 140
           R  P
Sbjct: 65  RASP 68


>gi|260461490|ref|ZP_05809737.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259032560|gb|EEW33824.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 216

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 24/203 (11%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             +G+V      R +      T + +P+L +  F+ +GLP + L                
Sbjct: 37  LGVGLVYGPTPLRWAVRIFSDTIRGIPILVLMFFVYYGLPAIGLHL-------------- 82

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                     P F +   AL+ +  A + E VR  + ++P+GQ EAA+A+GLT R+    
Sbjct: 83  ----------PSFWAAVFALTLFKTAQVVEYVRGAVGSIPQGQSEAAMAIGLTFRQRLAY 132

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+ PQA R  +PP  +   + +K S+L   +G  DL+     +I +T +A+ + ++   I
Sbjct: 133 VIFPQAFRRFLPPWINGVTDAVKGSALVSLLGITDLMQAINQVIGRTYEAMPLYILGALI 192

Query: 374 YLSLSIMIALFMNRLNAKIALKE 396
           Y +++  ++L   RL  + +   
Sbjct: 193 YFAVNYALSLASRRLERRFSFIR 215


>gi|302521614|ref|ZP_07273956.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|302430509|gb|EFL02325.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 213

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 19/211 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             T         ++  VL L     SR         LP+  ++ F I   P LV +   Y
Sbjct: 21  FWTTLLATALGSLVAAVLGLLVAMASR---GPAWVRLPVKAVTEF-IRSTPLLVQLVGVY 76

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L                          I L  + A ++ E  R+G+ AVP+GQ EAA A
Sbjct: 77  TLFGSV---------------DPLTLGIIVLGVHYATYMGEAYRAGIDAVPKGQWEAARA 121

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L L+  +    V+LPQA+R+++P L +  + + K +     +   D+V       +    
Sbjct: 122 LSLSPGRTWGAVVLPQAVRNVLPALGNYAIAMFKETPYLAVITVGDMVLHAREYGSAHFA 181

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             E+  +   I+L  S   +L M +L  ++ 
Sbjct: 182 HAEVFTLAGLIFLVASYPTSLLMRKLEKRLG 212



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T      G + A ++G LV          V    +   E  R+ P LV +  +
Sbjct: 17  LLDGFWTTLLATALGSLVAAVLGLLVAMASRGPAW-VRLPVKAVTEFIRSTPLLVQLVGV 75

Query: 149 YKSVLSVLP 157
           Y    SV P
Sbjct: 76  YTLFGSVDP 84


>gi|302873344|ref|YP_003841977.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|307688486|ref|ZP_07630932.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|302576201|gb|ADL50213.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
          Length = 216

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 98/195 (50%), Gaps = 13/195 (6%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +   R+S++F  +      +      ++ G P ++ + + Y   +       + F     
Sbjct: 35  ISFGRMSKNFLVR-----AVTKFYISVMRGTPLMLQLIVVYFAPY-------YVFKIQLG 82

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
            S  F+++ IA     AA+ AEI RSG+ ++P GQ EAA  LG T  +    ++LPQ ++
Sbjct: 83  NSYRFIAVIIAFVLNYAAYFAEIYRSGIESIPVGQYEAAKVLGYTKSQTFFKIILPQVIK 142

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            I+PP+T++ + L+K++SLA  +   ++ +    +   +G  +  +++    Y   ++++
Sbjct: 143 RILPPVTNETITLVKDTSLAFVLSIVEMFTAAKQVAA-SGTTMMPLMVAGLFYYIFNLLV 201

Query: 382 ALFMNRLNAKIALKE 396
           A+ M ++  K++   
Sbjct: 202 AIAMEQVEKKLSYYR 216


>gi|170767557|ref|ZP_02902010.1| histidine ABC transporter, permease protein HisQ [Escherichia
           albertii TW07627]
 gi|170123891|gb|EDS92822.1| histidine ABC transporter, permease protein HisQ [Escherichia
           albertii TW07627]
          Length = 228

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRWQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSMGVKR 225



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|326775557|ref|ZP_08234822.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326655890|gb|EGE40736.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 295

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 26/254 (10%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           ++   +                  +    L     T+   A   V S +LG VL++    
Sbjct: 46  WIVYLLFDTDQFTAEKWTPFEYKGIQELLLRGLGNTLKAFAYAAVLSLLLGAVLAV---- 101

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    +  + L  L +  F                     PVL    FI  +      
Sbjct: 102 -GRLSEHRVLRWLSTLLVEFFR------------------AMPVLVMIFFIFVALKVQPL 142

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L   L+ Y  + +AE+ R+G+ +V RGQ EAA ALG+   + T  VL PQA+R+++P 
Sbjct: 143 PALVAGLTLYNGSVLAEVFRTGINSVDRGQREAAYALGMRKTQVTTFVLAPQAVRAMLPT 202

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIMIAL 383
           + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ + ++++ 
Sbjct: 203 IISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGMCMLLSW 262

Query: 384 FMNRLNAKIALKEK 397
           F   +  +     +
Sbjct: 263 FATWVARRQRRNPR 276



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 18/131 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  ++   I    ++  +  W V                  L +   F   +   P+  
Sbjct: 25  ARRRHLMYGIASTAVIVALLGWIVY----------------LLFDTDQFT-AEKWTPFEY 67

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G  NT        + + ++G ++  GRLS ++++ W+  + VE FR +P 
Sbjct: 68  KG-IQELLLRGLGNTLKAFAYAAVLSLLLGAVLAVGRLSEHRVLRWLSTLLVEFFRAMPV 126

Query: 142 LVVIFFLYKSV 152
           LV+IFF++ ++
Sbjct: 127 LVMIFFIFVAL 137


>gi|254701521|ref|ZP_05163349.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 5 str. 513]
 gi|254709862|ref|ZP_05171673.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis B2/94]
 gi|256031354|ref|ZP_05444968.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis M292/94/1]
 gi|256060864|ref|ZP_05451024.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           neotomae 5K33]
 gi|256159476|ref|ZP_05457244.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M490/95/1]
 gi|256254762|ref|ZP_05460298.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti B1/94]
 gi|260168488|ref|ZP_05755299.1| amino acid ABC transporter, permease protein [Brucella sp. F5/99]
 gi|261221941|ref|ZP_05936222.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261317403|ref|ZP_05956600.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261324861|ref|ZP_05964058.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261752069|ref|ZP_05995778.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261757956|ref|ZP_06001665.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|265988440|ref|ZP_06100997.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|265997904|ref|ZP_06110461.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|294852108|ref|ZP_06792781.1| general L-amino acid transport system permease [Brucella sp. NVSL
           07-0026]
 gi|260920525|gb|EEX87178.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261296626|gb|EEY00123.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261300841|gb|EEY04338.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261737940|gb|EEY25936.1| polar amino acid ABC transporter [Brucella sp. F5/99]
 gi|261741822|gb|EEY29748.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|262552372|gb|EEZ08362.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|264660637|gb|EEZ30898.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|294820697|gb|EFG37696.1| general L-amino acid transport system permease [Brucella sp. NVSL
           07-0026]
          Length = 385

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L+  V  V+             ++         +T+  +      S  LGI
Sbjct: 136 IPKKGLNAILFFLVFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGI 195

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I       L T++ +A      F  P         
Sbjct: 196 VLAL-----GRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP--------- 241

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 + +   I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQ
Sbjct: 242 -GVTFDKLLRALIGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQ 300

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +     +             ++   F+
Sbjct: 301 ALKLVIPGIVNTFIGLFKDTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFV 360

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +   +  ++    K+
Sbjct: 361 FWIFCFAMSRYSIFMERRLDTGHKR 385



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|254501118|ref|ZP_05113269.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
 gi|222437189|gb|EEE43868.1| ABC transporter, permease protein [Labrenzia alexandrii DFL-11]
          Length = 383

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 18/266 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P      +   +  V+       +L   +  +N  L      +     + +   V GIV 
Sbjct: 128 PSAPFKKINAILFLVVFPIIAYFLLTGLVIGDNVVLPIVETAVWGGLLVTLVIAVTGIVA 187

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           SL    A  L R       K + +++I  +    L T VL      L    P    F+  
Sbjct: 188 SLPLGVALALGRRSKMPIIKLVSIIFIEFWRGVPLIT-VLFMSSVMLPLFLPEGVTFD-- 244

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL       L++LP
Sbjct: 245 -------KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILP 297

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-----IINQTGQAIEIILIWMF 372
           QA++ +IP + + ++ L K+++L + VG  DL+    +       +   Q     L    
Sbjct: 298 QALKLVIPGIVNTFIGLFKDTTLVLIVGMFDLLGQIQSSFTDPTWSTPSQGHTGYLFAAI 357

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           I+      ++ +   +  K+    K+
Sbjct: 358 IFFVFCFGMSRYSIYMEKKLHTGHKR 383



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 61/164 (37%), Gaps = 8/164 (4%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           TA+  G + T  +A +G++ +  +G  +  GR S   ++  +  +++E +R +P + V+F
Sbjct: 168 TAVWGGLLVTLVIAVTGIVASLPLGVALALGRRSKMPIIKLVSIIFIEFWRGVPLITVLF 227

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV------FSFVLGIVL 200
                +   LP       L   +       +     +       +       +  LG+  
Sbjct: 228 MSSVMLPLFLPEGVTFDKLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRF 287

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 +     +     +P +  +   +F   TLVLI   + L
Sbjct: 288 WPMMYLI--ILPQALKLVIPGIVNTFIGLFKDTTLVLIVGMFDL 329


>gi|213162276|ref|ZP_03347986.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 226

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 90/214 (42%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGLVG-AGAKLSQNRVTGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +   +           ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            TH +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +    +LS N++   I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|325685428|gb|EGD27529.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 213

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + M +     S   +T+    +  +FS  LGI++S            +      LL  
Sbjct: 1   MKYVMEILPSLFSGAGMTLQIFFETLIFSLPLGILVSFG-------LSSRFAPLKWLLNF 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +L+ G P L+ +   +   +  P++            P +M+  +A      A+ AEI
Sbjct: 54  YVWLMRGTPLLLQLIFVF---YGLPIV--------GLTFPRYMAALVAFVLNYTAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G  A+ RGQ EAA  L LT+ +  R +++PQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGNQAIDRGQFEAAKVLQLTYGQTLRKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  DL+  G     +    +  +++   IYL L  +  L + +L    +   
Sbjct: 163 GLGDLLRAGNLATARD-VTLVPLVLVALIYLFLIGLCTLLLRQLEKHYSYYR 213



 Score = 39.5 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  + F  +I +  +G LV  G  S    + W+   YV + R  P L+ + F+
Sbjct: 11  LFSGAGMTLQIFFETLIFSLPLGILVSFGLSSRFAPLKWLLNFYVWLMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  V       +       LN              A 
Sbjct: 71  FYGLPIVGLTFPRYMAALVAFVLNYTAYFAEIFRGGNQAI 110


>gi|291521639|emb|CBK79932.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Coprococcus catus GD/7]
          Length = 216

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 101/226 (44%), Gaps = 10/226 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    +               F  ++  ++      L R         +   YIS  ++ 
Sbjct: 1   MTVMQIVQQLFGSMGITMEIFFVTLITSLILGLGLALIRMSKNPILSVIAKFYIS--VMR 58

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ + + Y   F       F F    T S    ++ I  +   AA+ AEI RSG+ 
Sbjct: 59  GTPLMLQLLVVYFGPF-------FIFGMQITPSYRLKAVLIGFALNYAAYFAEIYRSGIA 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA  LG +  +    +++PQ ++ IIPP+ ++ + L+K++SLA  +  A++ 
Sbjct: 112 AIPVGQYEAARMLGYSKTQTFAYIVMPQVIKRIIPPVANETITLVKDTSLAFTLAVAEVF 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +V   ++  +  ++   ++    Y   ++++A+F + L  K+    
Sbjct: 172 TVTKQLVA-SQSSVVPFIVAGIFYYIFNLIVAVFFDYLEKKMDYYR 216


>gi|237800638|ref|ZP_04589099.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331023497|gb|EGI03554.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 220

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    + V G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWTAREVLWSGFLTSIQCSALAIVAGTLIGMLAG-LVLTYGGFFARLPVR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL      + +  P L              F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVL-----AVFYMVPAL--------GWHISAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+P GQ+EA  A+GL   +  R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPPGQIEAGKAIGLRFSQTLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 219



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-- 140
            +    +  GF+ +   +   ++  T+IG L G              R+YV++ R  P  
Sbjct: 12  WTAREVLWSGFLTSIQCSALAIVAGTLIGMLAGLVLTYGGFFARLPVRLYVDLIRGTPVF 71

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            LV+  F     L        +  +   +F
Sbjct: 72  VLVLAVFYMVPALGWHISAFQAGAIGLTLF 101


>gi|225627245|ref|ZP_03785282.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225617250|gb|EEH14295.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
          Length = 387

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L+  V  V+             ++         +T+  +      S  LGI
Sbjct: 138 IPKKGLNAILFFLVFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGI 197

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I       L T++ +A      F  P         
Sbjct: 198 VLAL-----GRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP--------- 243

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 + +   I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQ
Sbjct: 244 -GVTFDKLLRALIGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQ 302

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +     +             ++   F+
Sbjct: 303 ALKLVIPGIVNTFIGLFKDTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFV 362

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +   +  ++    K+
Sbjct: 363 FWIFCFAMSRYSIFMERRLDTGHKR 387



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 174 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 233

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 234 SVMLPLFLPP 243


>gi|85704885|ref|ZP_01035986.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. 217]
 gi|85670703|gb|EAQ25563.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. 217]
          Length = 218

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 13/227 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +    L F    +  +  +   + + G+VL      L+R    K        Y++
Sbjct: 3   DFDFGVILNNLPFLWQGLQLSLWLTFLAVLGGVVLGTLL-ALARLSGIKPLALFAAAYVN 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                      LI + +  +F  P+       G       F S  IA   + AA+ +EI+
Sbjct: 62  LIRSVP-----LILVIFWFYFLVPLAVGRPIGG-------FYSALIAFVMFEAAYYSEIM 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V  GQ+ A  A GL + +  R ++LPQA R++IP L +Q + L +++SL   V 
Sbjct: 110 RAGIQSVRTGQVHAGQATGLGYWQVQRYIVLPQAFRNMIPILVTQGIILFQDTSLVFVVS 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             DL++    +    G+ +E+ L    +Y  +    +LF+ RL A++
Sbjct: 170 LRDLMTASSIVARTEGRLVEMYLFAALVYFVICFAGSLFVRRLQARM 216



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 2/153 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   + WL F  ++   ++GTL+   RLS  K +A     YV + R++P ++VIF+ 
Sbjct: 16  LWQGLQLSLWLTFLAVLGGVVLGTLLALARLSGIKPLALFAAAYVNLIRSVPLILVIFWF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  V   +  P          F+      +  +       +       G    L   ++ 
Sbjct: 76  YFLVPLAVGRPIGGFYSALIAFVMFEAAYYSEIMRAGIQSVRTGQVHAGQATGLGYWQVQ 135

Query: 209 RH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           R+    +     +P+L     ++F   +LV + 
Sbjct: 136 RYIVLPQAFRNMIPILVTQGIILFQDTSLVFVV 168


>gi|218548237|ref|YP_002382028.1| histidine/lysine/arginine/ornithine ABC transporter membrane
           protein [Escherichia fergusonii ATCC 35469]
 gi|218355778|emb|CAQ88391.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia fergusonii
           ATCC 35469]
 gi|323967749|gb|EGB63161.1| inner membrane transport system [Escherichia coli M863]
 gi|323977491|gb|EGB72577.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324112845|gb|EGC06821.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325496652|gb|EGC94511.1| histidine/lysine/arginine/ornithine transporter subunit ; membrane
           component of ABC superfamily [Escherichia fergusonii
           ECD227]
 gi|327252579|gb|EGE64238.1| histidine transport system permease protein hisQ [Escherichia coli
           STEC_7v]
          Length = 228

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRFSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+    I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRFSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|241205009|ref|YP_002976105.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858899|gb|ACS56566.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 268

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 17/211 (8%)

Query: 192 FSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
               +G +++L         RL+   +    + LP L     + +G+  L+   L +  +
Sbjct: 66  IGLAIGFLVALGQQSEEKPLRLAAGIYTTIFRGLPELLTLFIIYYGMQMLIQSLLTFVGY 125

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P+               F++  IALS   +A+ +E++ S   A+P+GQ EA  ALGL
Sbjct: 126 DGPPIEIN-----------AFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGDALGL 174

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD++      +  T +   
Sbjct: 175 HRGRTLRLIVLPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTKEPFF 234

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   +YL L+I+ +  +  +       E
Sbjct: 235 FYGLACCLYLVLAILSSFLLVYVERWAKRSE 265



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 7/169 (4%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q  +    D+ +   I +G   T  +A   +     IG LV  G+ S  K +     +
Sbjct: 32  LGQSTILACGDTGWGDEIALGLQVTISVAIVTLPIGLAIGFLVALGQQSEEKPLRLAAGI 91

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR +P L+ +F +Y  +  ++        L   +  +   +          A   V
Sbjct: 92  YTTIFRGLPELLTLFIIYYGMQMLI------QSLLTFVGYDGPPIEINAFLAGVIALSVV 145

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           FS     VL L A R       + G AL L    T  +  LP LV IAL
Sbjct: 146 FSAYCSEVL-LSAFRAIPKGQYEAGDALGLHRGRTLRLIVLPQLVRIAL 193


>gi|148559315|ref|YP_001258725.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|148370572|gb|ABQ60551.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
          Length = 385

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L+  V  V+             ++         +T+  +      S  LGI
Sbjct: 136 IPKKGLNAILFFLVFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGI 195

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I       L T++ +A      F  P         
Sbjct: 196 VLAL-----GRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP--------- 241

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 + +   I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQ
Sbjct: 242 -GVTFDKLLRALIGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTSLVVLPQ 300

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +     +             ++   F+
Sbjct: 301 ALKLVIPGIVNTFIGLFKDTSLVYIIGMFDLLGIVRQNFSDANWASPQAPATGLIFAGFV 360

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +   +  ++    K+
Sbjct: 361 FWIFCFAMSRYSIFMERRLDTGHKR 385



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|116255414|ref|YP_771247.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260062|emb|CAK03161.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 234

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +F  S + G +L+L      R        +    YI  F+  G P L
Sbjct: 10  LVTLLKAVPTTLILFSLSIITGGLLALVI-VWMRTSGNPVLTSFAKGYI--FIFRGSPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + + L +        LGQF FI  S + P      +   ++L+  TA + AEI R G+ A
Sbjct: 67  IQMFLVFY------GLGQFGFIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRA 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V   ++EAA ++G++     R +L P A R  +P  +++ + ++K+++LA  V   ++  
Sbjct: 121 VSPKEIEAARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTG 180

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           V   +I+QT + +E+ L    IYL L+ +I   M  L   ++   +
Sbjct: 181 VAQRLISQTYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRR 226


>gi|307546907|ref|YP_003899386.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307218931|emb|CBV44201.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 364

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 107/255 (41%), Gaps = 14/255 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P +           V       ++L  G F      +     +     +     V  + +
Sbjct: 117 PRLPAKRWAGLFALVGFPILAFVLLLGGHFGLEAVPTRQWGGLMLTLTVATVGIVGSLPI 176

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +    L R       ++L +++I  +    L T VL      L    P   +F+     
Sbjct: 177 GVVL-ALGRRSKMPLVRSLCVVFIEFWRGVPLIT-VLFMASVMLPLFVPTEVEFD----- 229

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               + +   I +  + +A++AE+VR GL A+P GQ EAA ALG+ + +   L++LPQA+
Sbjct: 230 ----KLLRALIGIMFFWSAYMAEVVRGGLQAIPSGQEEAAKALGMGYWRRMGLIVLPQAL 285

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLV---SVGGTIINQTGQAIEIILIWMFIYLSL 377
           + +IP + + ++ L K++SL + +G  DL+     G T  N  G A E  +    ++   
Sbjct: 286 KLVIPGIVNTFIALFKDTSLVLIIGLFDLLAIIRAGLTDSNWLGFATEGYVFAALMFWVF 345

Query: 378 SIMIALFMNRLNAKI 392
              ++ +   +  ++
Sbjct: 346 CFSMSRYSQYIERRL 360



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 78/201 (38%), Gaps = 5/201 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T  +A  G++ +  IG ++  GR S   LV  +C V++E +R +P + V+F   
Sbjct: 156 WGGLMLTLTVATVGIVGSLPIGVVLALGRRSKMPLVRSLCVVFIEFWRGVPLITVLFMAS 215

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +   +P       L   +       S     +       + S       +L      R
Sbjct: 216 VMLPLFVPTEVEFDKLLRALIGIMFFWSAYMAEVVRGGLQAIPSGQEEAAKALGMGYWRR 275

Query: 210 HFHEKTGKAL----PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSP 264
                  +AL    P +  +   +F   +LVLI   +  L   +  L   N++G +T   
Sbjct: 276 MGLIVLPQALKLVIPGIVNTFIALFKDTSLVLIIGLFDLLAIIRAGLTDSNWLGFATEGY 335

Query: 265 EFMSLYIALSCYTAAFIAEIV 285
            F +L   + C++ +  ++ +
Sbjct: 336 VFAALMFWVFCFSMSRYSQYI 356


>gi|304414486|ref|ZP_07395706.1| putative polar amino acid ABC transporter permease [Candidatus
           Regiella insecticola LSR1]
 gi|304283204|gb|EFL91606.1| putative polar amino acid ABC transporter permease [Candidatus
           Regiella insecticola LSR1]
          Length = 245

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 4/245 (1%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL--SLFATRLSRH 210
           + +  + D  +   + ++L +  L    L+  T+    +  F+L       L A +    
Sbjct: 1   MKLHHLTDWLLAPQYLLWLWDGFLLTLWLSSCTSVIATLLGFLLATARDSHLRALQWPVM 60

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
            +    +  PLL    F  F +  ++ ++    L+     +  F  I  S  S EF+S  
Sbjct: 61  LYSALFRNTPLLIQLFFWYFAVSKILPVSWMQWLNISHQAV--FLGITLSWPSFEFLSGL 118

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             L  Y+AAFIAE +R+G+  V  GQ  AA ALGLT+ ++ R V+LPQA++  +PPL  Q
Sbjct: 119 TGLILYSAAFIAEELRAGINGVASGQKYAAHALGLTNWQSMRYVILPQALKISMPPLLGQ 178

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           Y+N++KNSSL +A+G A+L      +  +T +  +   +   +Y+    +I  +      
Sbjct: 179 YMNIIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATLLYIMTIALIEAWGMWRQQ 238

Query: 391 KIALK 395
           ++  +
Sbjct: 239 RLKAR 243



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 43/89 (48%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T WL+    + AT++G L+   R S  + + W   +Y  
Sbjct: 5   HLTDWLLAPQYLLWLWDGFLLTLWLSSCTSVIATLLGFLLATARDSHLRALQWPVMLYSA 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +V  +LP+     
Sbjct: 65  LFRNTPLLIQLFFWYFAVSKILPVSWMQW 93


>gi|331647963|ref|ZP_08349055.1| histidine transport system permease protein HisQ [Escherichia coli
           M605]
 gi|281179394|dbj|BAI55724.1| histidine ABC transporter permease component [Escherichia coli
           SE15]
 gi|330912131|gb|EGH40641.1| histidine ABC transporter, permease protein HisQ [Escherichia coli
           AA86]
 gi|331043687|gb|EGI15825.1| histidine transport system permease protein HisQ [Escherichia coli
           M605]
          Length = 228

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +++ IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV+
Sbjct: 5   FSSVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|227114974|ref|ZP_03828630.1| glutamate/aspartate transport system permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
 gi|227327384|ref|ZP_03831408.1| glutamate/aspartate transport system permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 246

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             LS   +T+  +   ++ +F++G +  +  T  +R        + +  + +PL+     
Sbjct: 24  WILSGLQVTVTLSICAWIIAFLIGSLFGILRTVPNRFLAGIGTCYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+ + +      +     QF           F+S  I L  +TAA + E VR+
Sbjct: 84  WYLVVPELLPVNIGMWFKAELDPNIQF-----------FLSSMICLGLFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+PPLTS+ LNL+KNS++A  +G  
Sbjct: 133 GIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M  +  K  L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIMQVVERKTRL 239



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   IL G   T  L+    I A +IG+L G 
Sbjct: 3   IDWNWGIFLQAAPFG----------NTTYLGWILSGLQVTVTLSICAWIIAFLIGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ +A I   YVE+FRN+P +V  F  Y  V  +LP+     
Sbjct: 53  LRTVPNRFLAGIGTCYVELFRNVPLIVQFFTWYLVVPELLPVNIGMW 99


>gi|205351949|ref|YP_002225750.1| glutamate/aspartate transport system permease GltK [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205271730|emb|CAR36563.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326626988|gb|EGE33331.1| glutamate/aspartate transport system permease protein GltK
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 224

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIIPSLPYLLAGLVITLKITVTAVVVGIVWGTILAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R++ P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMAPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVISLSASLLVSYLKKR 222



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|153215607|ref|ZP_01950052.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587]
 gi|124114695|gb|EAY33515.1| arginine ABC transporter, permease protein [Vibrio cholerae 1587]
          Length = 229

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F           F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFFITSEFIEISPFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSIQ 219


>gi|121600257|ref|YP_992993.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei SAVP1]
 gi|121229067|gb|ABM51585.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei SAVP1]
          Length = 320

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 4/219 (1%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215
             D  +   + M+L    L    L++       +  F L I       + R +   +   
Sbjct: 79  EMDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVA 138

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS 
Sbjct: 139 FRNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLALRWPSFEFVAGWLGLSG 196

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+
Sbjct: 197 YTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLI 256

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           KNSSL +A+G A+L      +  +T +      +   +Y
Sbjct: 257 KNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLY 295



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 88  YLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 147

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 148 LLFWYFGVAALLPEPAMAW 166


>gi|769793|emb|CAA60104.1| artM [Escherichia coli K-12]
          Length = 222

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T+  + V S ++ ++L+L  T +      KT   + L+     L  G
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTII---LTLKTPVLVWLVRGYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A
Sbjct: 58  TPLLVRIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIALSVNSAAYTTQLFYGAIRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++ 
Sbjct: 117 IPEGQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  +T   + +      IYL ++ ++ L M  +  K    E++
Sbjct: 176 YSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKAVAFERR 221



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   +  L  + +I A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPLLVR 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   ++          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSVNSAAYTTQLFYGAIRAI 117


>gi|16759616|ref|NP_455233.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16764041|ref|NP_459656.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142611|ref|NP_805953.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|56414207|ref|YP_151282.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|62179262|ref|YP_215679.1| glutamate/aspartate ABC transporter [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161615118|ref|YP_001589083.1| hypothetical protein SPAB_02886 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167550798|ref|ZP_02344554.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|167990673|ref|ZP_02571773.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168231679|ref|ZP_02656737.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168236651|ref|ZP_02661709.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168240513|ref|ZP_02665445.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|168264403|ref|ZP_02686376.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168465841|ref|ZP_02699723.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|168820211|ref|ZP_02832211.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194445140|ref|YP_002039907.1| glutamate/aspartate ABC transporter permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194448493|ref|YP_002044699.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194470878|ref|ZP_03076862.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194734571|ref|YP_002113775.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197251810|ref|YP_002145640.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197261867|ref|ZP_03161941.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|198242331|ref|YP_002214652.1| glutamate/aspartate ABC transporter permease GltJ [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200389956|ref|ZP_03216567.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204930566|ref|ZP_03221496.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|207856129|ref|YP_002242780.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213425079|ref|ZP_03357829.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213580533|ref|ZP_03362359.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
 gi|213609636|ref|ZP_03369462.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213647481|ref|ZP_03377534.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|224582499|ref|YP_002636297.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|238911615|ref|ZP_04655452.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
 gi|289805230|ref|ZP_06535859.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
 gi|289823920|ref|ZP_06543520.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|25296624|pir||AE0583 glutamate/aspartate transport system permease protein GltJ STY0709
           [imported] - Salmonella enterica subsp. enterica serovar
           Typhi (strain CT18)
 gi|16419177|gb|AAL19615.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16501908|emb|CAD05135.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi]
 gi|29138242|gb|AAO69813.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|56128464|gb|AAV77970.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|62126895|gb|AAX64598.1| ABC superfamily (membrane), glutamate/aspartate transporter
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161364482|gb|ABX68250.1| hypothetical protein SPAB_02886 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403803|gb|ACF64025.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194406797|gb|ACF67016.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194457242|gb|EDX46081.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194710073|gb|ACF89294.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195631650|gb|EDX50170.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197215513|gb|ACH52910.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197240122|gb|EDY22742.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197290414|gb|EDY29770.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197936847|gb|ACH74180.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602401|gb|EDZ00947.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204320500|gb|EDZ05703.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205324294|gb|EDZ12133.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205330904|gb|EDZ17668.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205334014|gb|EDZ20778.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205339997|gb|EDZ26761.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|205343175|gb|EDZ29939.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205347134|gb|EDZ33765.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206707932|emb|CAR32221.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224467026|gb|ACN44856.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|261245936|emb|CBG23738.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. D23580]
 gi|267992398|gb|ACY87283.1| glutamate/aspartate transporter [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157264|emb|CBW16752.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. SL1344]
 gi|312911696|dbj|BAJ35670.1| glutamate/aspartate ABC transporter permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320084937|emb|CBY94726.1| Octopine transport system permease protein occM [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|321226243|gb|EFX51294.1| Glutamate Aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322613210|gb|EFY10153.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322621278|gb|EFY18135.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322623698|gb|EFY20536.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322628970|gb|EFY25749.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322631692|gb|EFY28446.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322637572|gb|EFY34274.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322641912|gb|EFY38542.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322646756|gb|EFY43262.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322651457|gb|EFY47837.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322653092|gb|EFY49426.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322658812|gb|EFY55067.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322664918|gb|EFY61111.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322668920|gb|EFY65072.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322670574|gb|EFY66707.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322675315|gb|EFY71391.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322682214|gb|EFY78239.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322684957|gb|EFY80954.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|322713728|gb|EFZ05299.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323128981|gb|ADX16411.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|323193985|gb|EFZ79187.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323197923|gb|EFZ83045.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323202030|gb|EFZ87090.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323207163|gb|EFZ92116.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323210930|gb|EFZ95793.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323214310|gb|EFZ99061.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323219285|gb|EGA03776.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323225504|gb|EGA09734.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323231063|gb|EGA15179.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323234105|gb|EGA18194.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323238200|gb|EGA22258.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323242566|gb|EGA26590.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323248457|gb|EGA32391.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323251328|gb|EGA35200.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323259256|gb|EGA42899.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323264845|gb|EGA48346.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323272318|gb|EGA55725.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326622407|gb|EGE28752.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
          Length = 246

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQEAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGL 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M+ +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMSLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   +  GF  T  L+ +  I A ++G++ G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  V  +LP 
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVVPELLPE 94


>gi|308186029|ref|YP_003930160.1| glutamate/aspartate transport system permease protein gltK [Pantoea
           vagans C9-1]
 gi|308056539|gb|ADO08711.1| Glutamate/aspartate transport system permease protein gltK [Pantoea
           vagans C9-1]
          Length = 225

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V GI+       + R    K       +Y
Sbjct: 1   MYDFDWSSITPSLPYLLNGLVITFKITITAVVFGILWGTLL-AVMRLSSFKPVSWFAKIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+I++ RGQ  AA+ALG+T  +A RL++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIISISRGQGNAALALGMTQWQAMRLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E++L    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMVLFAGLVYFVISLSASLLVSYLKRK 222



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 45/78 (57%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S +     +L G V TF +  + ++   + GTL+   RLS+ K V+W  ++YV +FR
Sbjct: 5   DWSSITPSLPYLLNGLVITFKITITAVVFGILWGTLLAVMRLSSFKPVSWFAKIYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S 
Sbjct: 65  SVPLVMVLLWFYLVVPSF 82


>gi|306842007|ref|ZP_07474680.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306287848|gb|EFM59268.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 387

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/307 (20%), Positives = 128/307 (41%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   +S    +     ++  +   + PL++     K + ++L   
Sbjct: 94  ACWAFVNAKYEQFLYGRYPISERWRIDLTALIFAAL---LVPLLIPKVPKKGLNAILFFL 150

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +V  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 151 VFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVI 210

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L +++I       L T++ +A      F  P               + +   I ++ +
Sbjct: 211 KTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 260

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + ++ L K
Sbjct: 261 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNTFIGLFK 320

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +             ++   F++      ++ +   +  +
Sbjct: 321 DTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 380

Query: 392 IALKEKK 398
           +    K+
Sbjct: 381 LDTGHKR 387



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 174 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 233

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 234 SVMLPLFLPP 243


>gi|229015972|ref|ZP_04172933.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1273]
 gi|229022189|ref|ZP_04178739.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1272]
 gi|228739120|gb|EEL89566.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1272]
 gi|228745332|gb|EEL95373.1| Polar amino acid ABC transporter, inner membrane subunit [Bacillus
           cereus AH1273]
          Length = 214

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 12/201 (5%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            + V  ++  +  + +    + K      +L I   +I  LP L++I   Y         
Sbjct: 25  VALVAIVLSFIIGSIIGILRYMKIPVVSQVLGIIVEVIRNLPLLLIIFFTY--------- 75

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F             ++ +AL+ + AA I+EIVRSGL+++ +GQ+EAA + GLT+ +A 
Sbjct: 76  --FALPEVGLKLEIITAVIVALTIFEAAMISEIVRSGLLSIEKGQIEAARSSGLTYVQAL 133

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA-IEIILIW 370
             ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     I  Q     I   ++ 
Sbjct: 134 WHIILPQALRRMVPPLVSQFISLLKDTSLAVGISLPELMHNAQIISGQNVNYMIPTFILV 193

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
             +Y  ++  +++   RL  +
Sbjct: 194 ACMYFVVNYGLSILSRRLEIR 214



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R     +V+ +  + VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSIIGILRYMKIPVVSQVLGIIVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++  V
Sbjct: 68  LLIIFFTYFALPEV 81


>gi|89070520|ref|ZP_01157809.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Oceanicola granulosus HTCC2516]
 gi|89043827|gb|EAR50025.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Oceanicola granulosus HTCC2516]
          Length = 662

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 18/214 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + S  LGI+L+L      R         + + +I   +I G+P +V +        
Sbjct: 464 LSGIILSLPLGILLAL-----GRQSDLFIINKVSVAFIE--IIRGVPLIVWLF------- 509

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L    F+   T     + + I ++ + +A+IAE+VR GL A+P GQ EAA ALGL 
Sbjct: 510 -TAQLLLNYFLPPGTNFDLLLRVIIMVTLFASAYIAEVVRGGLAALPTGQYEAADALGLD 568

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQA 363
           + K+ RLV+LPQA++  IP + + ++ L K+++L V +G  D + +  TI   T   G  
Sbjct: 569 YGKSMRLVVLPQALKISIPGIVNTFIGLFKDTTLVVFIGLLDPIGLSNTIRASTEWNGIY 628

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E+ +    ++      +  +   L  K+  + +
Sbjct: 629 WELFVFIGLLFFICCFSMGRYSLSLEKKLTREHR 662



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 36/74 (48%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+    +  SG+I +  +G L+  GR S   ++  +   ++E+ R +P +V +F     
Sbjct: 455 GFMLALIIGLSGIILSLPLGILLALGRQSDLFIINKVSVAFIEIIRGVPLIVWLFTAQLL 514

Query: 152 VLSVLPIPDHSIVL 165
           +   LP   +  +L
Sbjct: 515 LNYFLPPGTNFDLL 528


>gi|302205790|gb|ADL10132.1| glutamate transporter permease protein GluD [Corynebacterium
           pseudotuberculosis C231]
 gi|308276025|gb|ADO25924.1| glutamate transporter permease protein GluD [Corynebacterium
           pseudotuberculosis I19]
          Length = 312

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++V   L   VL  L        + +  F++ R  +   L          FS V+  ++ 
Sbjct: 28  VIVAIALIGWVLVALHSKGQLDAVKWAPFIDPRTWNTYLLPGLVGTLKSAFSSVILAIIL 87

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                L R    ++ + +       F    +P L+LI   YQ      V+          
Sbjct: 88  GVLLGLGRLSRRRSLRWICAAITEFF--RAVPVLLLIIFSYQALAMYKVVPPREL----- 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F ++  +L+ Y  A IAEI+R+G+ A+PRGQ EAA ALGL H +  + +LLPQA+ 
Sbjct: 141 ---AFTAVVFSLTMYNGAVIAEILRAGIRALPRGQTEAAQALGLGHWQTMQKILLPQAVA 197

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++P L +Q +  LK+S+L   +G+ ++V  G          +  +++   + + ++  +
Sbjct: 198 AMLPALIAQAVIALKDSALGYQIGYVEIVRQGIQSSATNRNYLPSLIVVAILMILINYSL 257

Query: 382 ALFMNRLNAKIALKEKK 398
            +   R+  ++     +
Sbjct: 258 TVLAERVERQLRAGRAR 274



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDMR-----VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD         N    ++  ++   +  W +  +++  +   +            
Sbjct: 4   RATVLYDAPGPNALRRNALYTVLTVIVAIALIGWVLVALHSKGQLDAVK----------- 52

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
                   P+    ++ T +L G V T   AFS +I A I+G L+G GRLS  + + WIC
Sbjct: 53  ------WAPFIDPRTWNTYLLPGLVGTLKSAFSSVILAIILGVLLGLGRLSRRRSLRWIC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
               E FR +P L++I F Y+++     +P   +     +F
Sbjct: 107 AAITEFFRAVPVLLLIIFSYQALAMYKVVPPRELAFTAVVF 147


>gi|156934641|ref|YP_001438557.1| arginine transporter permease subunit ArtM [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156532895|gb|ABU77721.1| hypothetical protein ESA_02475 [Cronobacter sakazakii ATCC BAA-894]
          Length = 222

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  +   S  + +VLS+  T +      KT   + ++     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTAASIAVALVLSVIFTVI---LTLKTPVLVWIVRGYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L    ++      P ++   +ALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPSLQNSPWLWHVLSEP-WLCALVALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++  G 
Sbjct: 120 GQWQSCGALGMSRKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYGQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  +    E++
Sbjct: 179 LLYGRTYDVM-VFGAAGVIYLIVNGLLTLLMRLIERRALAFERR 221



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 37/114 (32%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +  A ++  +          ++ WI R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTAASIAVALVLSVIFTVILTLKTPVLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + +   +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPSLQNSPWLWHVLSEPWLCALVALSLNSAAYTTQLFYGAIRAI 117


>gi|291007840|ref|ZP_06565813.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 230

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 93/232 (40%), Gaps = 18/232 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                +   +    L      +      ++ + VLG+V++L   R SR         L +
Sbjct: 12  KWDWDYAAEIFPMLLGALWTAIQAAVLGYLLALVLGLVIALL--RRSRVLWISVPVGLVV 69

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++        P +V +   +           F            ++  + L  + A ++
Sbjct: 70  EFV-----RSTPLIVQLFFLF-----------FVLPEVGIQMSPLLTGVVGLGLHYATYV 113

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+G+  VP GQ EAA AL L  R+    V+LPQA+   IP L +  + L K+    
Sbjct: 114 AEVYRAGIDGVPAGQWEAATALNLPTRRVWTDVILPQAIPRSIPALGNYLIALFKDVPQL 173

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           VA+   +  +V   +   T +  E I +   +YL+++++++        +  
Sbjct: 174 VAITVLEPFTVAREVTADTFRPFEAITLAGLLYLAVTLVMSYLGRLAERRFG 225



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 35/92 (38%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +   +     +L         A  G + A ++G ++   R S    ++    + VE  R
Sbjct: 14  DWDYAAEIFPMLLGALWTAIQAAVLGYLLALVLGLVIALLRRSRVLWISVPVGLVVEFVR 73

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           + P +V +FFL+  +  V       +    G+
Sbjct: 74  STPLIVQLFFLFFVLPEVGIQMSPLLTGVVGL 105


>gi|161524792|ref|YP_001579804.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189350454|ref|YP_001946082.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|160342221|gb|ABX15307.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189334476|dbj|BAG43546.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 250

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 18/205 (8%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           VLG+ L +            T    PL  +    I     + ++ L +  +F  P+L   
Sbjct: 42  VLGVALGVAM----------TLARGPLRVLLLAAIGFFRAIPVLMLIFWTYFLMPIL--- 88

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                 T  P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT  +  R V
Sbjct: 89  ----LHTDVPGLATVVCALALVGGAYLAHAVHAGIVAAGAGQWQAGLSLGLTRWQTVRHV 144

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFI 373
           LLPQA+R + P   +Q++ L+K++SLA  VG  +L  V   + N+       I L    I
Sbjct: 145 LLPQAVRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLFVAAI 204

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           YL +   +      L ++   + ++
Sbjct: 205 YLIICTSLDGAARWLLSRGPRERRR 229


>gi|157369456|ref|YP_001477445.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157321220|gb|ABV40317.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 246

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
              S   +T+  +   ++ +F +G +  +  T  +R        + +  + +PL+     
Sbjct: 24  WIWSGFQVTVALSVCAWIIAFFVGSLFGILRTVPNRFLSTLGTCYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+   +      +     QF           F+S  + L  +TAA + E VR+
Sbjct: 84  WYLVIPELLPANMGMWFKTELDPNVQF-----------FVSSMLCLGLFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+TS+ LNL+KNS++A  +G  
Sbjct: 133 AIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y++++ +I LFM  +  K+ L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFTAITLAYIAINAVIMLFMRLVERKVQL 239



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 64/182 (35%), Gaps = 17/182 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A  +G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTVALSVCAWIIAFFVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            R   N+ ++ +   YVE+FRN+P +V  F  Y  +  +LP       +           
Sbjct: 53  LRTVPNRFLSTLGTCYVELFRNVPLIVQFFTWYLVIPELLPA-----NMGMWFKTELDPN 107

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               ++      +F  + V   V +      R  R      G  LP  Y    L      
Sbjct: 108 VQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQRAAGLAMGLTLPQTYRYVLLPNAYRV 167

Query: 235 LV 236
           +V
Sbjct: 168 IV 169


>gi|262173970|ref|ZP_06041647.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus
           MB-451]
 gi|261891328|gb|EEY37315.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus
           MB-451]
          Length = 229

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 4/172 (2%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   +I GLP L+++   Y        L    FI  S     F++  IALS   A++ ++
Sbjct: 52  LMVTVIRGLPELLVVLFIYFGSTQVLFLITGEFIEIS----PFIAGVIALSLIFASYASQ 107

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R  L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   
Sbjct: 108 TLRGALKAVGRGQREAASALGIPPAHAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSL 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +G  DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 168 IGVTDLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSVQ 219


>gi|241666976|ref|YP_002985060.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862433|gb|ACS60098.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 222

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +   +L IV+ +    L R    K  + L + ++   LI   P LV I   Y    
Sbjct: 25  FLLAICGMLLAIVIGIGGVAL-RDSALKPARWLVIAFVE--LIRNTPFLVQIFFIY---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F             +  IAL     A+  EI+R G+ ++P+GQMEA +ALGL 
Sbjct: 78  -------FALPLTGIRLDPTPTAIIALGINGGAYAIEIIRGGVQSIPKGQMEAGLALGLH 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  RL++L  A+R+I P LTSQ++ L   +S+A A+   +L SV   I +++ ++ E+
Sbjct: 131 KAQVFRLIILKPALRAIYPSLTSQFVLLTLTTSIASAISAYELTSVSQRIESESFRSFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                  Y  +S ++       +A+ 
Sbjct: 191 YFTVTVFYFVISWLMMRIFALFSARY 216



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 44/84 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G + TF LA  GM+ A +IG    A R SA K   W+   +VE+ RN P LV IFF+
Sbjct: 17  LLLGCLGTFLLAICGMLLAIVIGIGGVALRDSALKPARWLVIAFVELIRNTPFLVQIFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y ++       D +      + +N
Sbjct: 77  YFALPLTGIRLDPTPTAIIALGIN 100


>gi|182435041|ref|YP_001822760.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178463557|dbj|BAG18077.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 295

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 26/260 (10%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            + +  ++   +                  +    L     T+   A   V S +LG VL
Sbjct: 40  IVALFGWIVYLLFDTDQFTAEKWTPFEYKGIQELLLRGLGNTLKAFAYAAVLSLLLGAVL 99

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           ++      R    +  + L  L +  F                     PVL    FI  +
Sbjct: 100 AV-----GRLSEHRVLRWLSTLLVEFFR------------------AMPVLVMIFFIFVA 136

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +L   L+ Y  + +AE+ R+G+ +V RGQ EAA ALG+   + T  VL PQA+
Sbjct: 137 LKVQPLPALVAGLTLYNGSVLAEVFRTGINSVDRGQREAAYALGMRKTQVTTFVLAPQAV 196

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSL 377
           R+++P + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ +
Sbjct: 197 RAMLPTIISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGM 256

Query: 378 SIMIALFMNRLNAKIALKEK 397
            ++++ F   +  +     +
Sbjct: 257 CMLLSWFATWVARRQRRNPR 276



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 18/131 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  ++   I    ++  +F W V                  L +   F   +   P+  
Sbjct: 25  ARRRHLMYGIASTAVIVALFGWIVY----------------LLFDTDQFT-AEKWTPFEY 67

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G  NT        + + ++G ++  GRLS ++++ W+  + VE FR +P 
Sbjct: 68  KG-IQELLLRGLGNTLKAFAYAAVLSLLLGAVLAVGRLSEHRVLRWLSTLLVEFFRAMPV 126

Query: 142 LVVIFFLYKSV 152
           LV+IFF++ ++
Sbjct: 127 LVMIFFIFVAL 137


>gi|153011889|ref|YP_001373102.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563777|gb|ABS17273.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 222

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 21/232 (9%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           VL +G  L    +    +T+       VF F++G+          R  + +  +    LY
Sbjct: 9   VLQYGPALLKGLVLTLQITVLCGLASVVFGFLIGV---------GRKSNVRPVRWACSLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   ++ G P L+ +   + + F  P++              F+S  IAL+ YT+A  +E
Sbjct: 60  VE--VLRGTPVLITL---FWVFFCFPIIFDVEL-------SPFISAVIALTLYTSAITSE 107

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R+ L ++ + Q +A  ALGL+       V+ PQ +   IP L S  ++L K S+L  A
Sbjct: 108 SFRAALGSIGQDQHDACKALGLSRFSKMMYVVAPQTIVRAIPNLMSNLVSLFKESALVSA 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           VG  +L+     I N T + +E++     +Y  +  ++   +N    ++ +K
Sbjct: 168 VGVVELMYTAQNISNVTARPVEVLTTAALVYFVIGWVLTRLVNAAETRLLVK 219



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 39/77 (50%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y  A+L G V T  +     + + + G L+G GR S  + V W C +YVEV 
Sbjct: 4   LDFSVVLQYGPALLKGLVLTLQITVLCGLASVVFGFLIGVGRKSNVRPVRWACSLYVEVL 63

Query: 137 RNIPPLVVIFFLYKSVL 153
           R  P L+ +F+++    
Sbjct: 64  RGTPVLITLFWVFFCFP 80


>gi|320196176|gb|EFW70800.1| Histidine ABC transporter, permease protein HisQ [Escherichia coli
           WV_060327]
          Length = 228

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 38/69 (55%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +++ IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV
Sbjct: 4   RFSSVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLV 63

Query: 144 VIFFLYKSV 152
           ++  ++  +
Sbjct: 64  LMLLIFYGL 72


>gi|34496309|ref|NP_900524.1| histidine transport system membrane protein M [Chromobacterium
           violaceum ATCC 12472]
 gi|34102162|gb|AAQ58529.1| histidine transport system membrane protein M [Chromobacterium
           violaceum ATCC 12472]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   LS   +TM        F FV+ I L++      +            
Sbjct: 6   QQYWRAFLWSDGYHLSGLAVTMWLLVLSIAFGFVVSIPLAVARVSKVKWLARAV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++ T++  G P  V +   Y   +   V+ +  F+        +    +A +  T A+ 
Sbjct: 60  -WLYTYVFRGTPLYVQLIFFYSGMYSLEVVREVGFL-NHFFREGYNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + A P G++EA  A G++     R V++P A+R  +P  +++ + +L  +++A
Sbjct: 118 TEIFAGAIKATPYGEIEAGRAYGMSPFTLYRRVIIPSALRRALPAYSNEVILMLHATTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V   +   T  +     +   +YLS++ ++     +  A+
Sbjct: 178 FTATVPDILKVARDVNAATYDSFNAFGLAALLYLSITFILVGLFRKAEAR 227



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 7/120 (5%)

Query: 83  SSYATAIL-------VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             Y  A L        G   T WL    +    ++   +   R+S  K +A    +Y  V
Sbjct: 6   QQYWRAFLWSDGYHLSGLAVTMWLLVLSIAFGFVVSIPLAVARVSKVKWLARAVWLYTYV 65

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR  P  V + F Y  + S+  + +   +  F     N  +    L             +
Sbjct: 66  FRGTPLYVQLIFFYSGMYSLEVVREVGFLNHFFREGYNCTILAFALNTCAYTTEIFAGAI 125


>gi|39935628|ref|NP_947904.1| polar amino acid ABC transport permease AapM-1 [Rhodopseudomonas
           palustris CGA009]
 gi|39649481|emb|CAE28003.1| polar amino acid ABC transport permease protein aapM-1
           [Rhodopseudomonas palustris CGA009]
          Length = 501

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 18/257 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FAT 205
           ++++ + + +     V+   + L+  GL      M     + +   V GIV S+    A 
Sbjct: 254 WRALATTVGMFAGIAVMVAALRLDRGGLPVVDTRMWGGLLVTLVVSVTGIVASMPIGIAL 313

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R       +   + +I  +    L T V+    Y L           F+ G+     
Sbjct: 314 ALGRRSTIPLIRIFSVAFIEFWRGVPLIT-VMFFATYMLPL---------FLPGNFTIDN 363

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            M + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T L++LPQA+R +IP
Sbjct: 364 LMRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKITGLIVLPQALRHVIP 423

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-----GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            L + ++ L K++SL   V   DL+            +              IY      
Sbjct: 424 GLVNSFIALFKDTSLVSIVALFDLLGQLRAAFADPTWSTPTTLFTGFAFTGLIYFVFCFG 483

Query: 381 IALFMNRLNAKIALKEK 397
           ++ +   +  ++    +
Sbjct: 484 MSRYSLSVEHRLNAHRR 500



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 57/138 (41%), Gaps = 7/138 (5%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGI--GFLSERAGFEIDQGIVPYTSDSSYATA 88
           +++  ++    ++ +  V N       ++G+  G     A   +D+G +P      +   
Sbjct: 233 LLITAVVVTALVFVLTGVRNGWRALATTVGMFAGIAVMVAALRLDRGGLPVVDTRMWG-- 290

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T  ++ +G++ +  IG  +  GR S   L+      ++E +R +P + V+FF 
Sbjct: 291 ---GLLVTLVVSVTGIVASMPIGIALALGRRSTIPLIRIFSVAFIEFWRGVPLITVMFFA 347

Query: 149 YKSVLSVLPIPDHSIVLP 166
              +   LP       L 
Sbjct: 348 TYMLPLFLPGNFTIDNLM 365


>gi|327193432|gb|EGE60331.1| octopine ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 232

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 3/172 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G+ +   Y+  F+  G P LV + L Y          Q   + G    P +    +AL
Sbjct: 47  EIGRTITRAYV--FVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFFREP-YWCAVLAL 103

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  TAA+ +EI R G++AV   ++EAA A G++     R ++LP A+R  +P   ++ + 
Sbjct: 104 TLNTAAYCSEIFRGGVLAVSAQEIEAARACGMSGILLFRRIILPIALRHALPAYGNEIIL 163

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           ++K ++LA  +   ++  + G +I  + +A EI ++   IYL++  ++   +
Sbjct: 164 MIKATALASVITIMEVTGLAGKLIADSFRAFEIFIVAGAIYLAIIFIVTRML 215


>gi|319761415|ref|YP_004125352.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|317115976|gb|ADU98464.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
          Length = 223

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 14/236 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            ++     FL+   L    L     + +      LG VL      L R   +K   A   
Sbjct: 1   MMLHIDWSFLSWELLRGFVLKGFIFSLVLTVIATLGGVLFGTLLALMRLSGKKWLMAPAT 60

Query: 222 LYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +Y++      L   ++   L   L   +P+  +              S  I    + AA+
Sbjct: 61  IYVNGMRSIPLVMVILWFFLLVPLIIGRPIGAE-------------ASAIITFVAFEAAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI+R+G+ +VPRGQ+ A  ALG+T+ +  +LV+LPQA R+++P L +Q + L +++SL
Sbjct: 108 FSEIMRAGIQSVPRGQVFAGQALGMTYSQNMKLVVLPQAFRNMLPVLLTQTIILFQDTSL 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             A+G  D++          G+ +E  L     Y  +   ++  + RL+ KIA+  
Sbjct: 168 VYAIGAYDMLKGFDVAGKNFGRPVEAYLAAAVAYFVICYSLSWAVKRLHKKIAIIR 223



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 72/193 (37%), Gaps = 8/193 (4%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF+ +  L     +   + GTL+   RLS  K +     +YV   R+IP ++VI + +
Sbjct: 20  LKGFIFSLVLTVIATLGGVLFGTLLALMRLSGKKWLMAPATIYVNGMRSIPLVMVILWFF 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             V  ++  P  +       F+      F  +       +       G  L +  ++  +
Sbjct: 80  LLVPLIIGRPIGAEASAIITFVAFEAAYFSEIMRAGIQSVPRGQVFAGQALGMTYSQNMK 139

Query: 210 H--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                +     LP+L   T ++F   +LV     Y +      L  F+  G +   P   
Sbjct: 140 LVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDM------LKGFDVAGKNFGRPVEA 193

Query: 268 SLYIALSCYTAAF 280
            L  A++ +   +
Sbjct: 194 YLAAAVAYFVICY 206


>gi|227542731|ref|ZP_03972780.1| glutamate transporter permease protein GluD [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227181497|gb|EEI62469.1| glutamate transporter permease protein GluD [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 312

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 110/261 (42%), Gaps = 15/261 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            I   V+ + L     +     +               L     T+       VF+ ++G
Sbjct: 29  VIAIAVIAWVLKVLGDNGQLAAEKWTPFLKSTTWTTYILPGLWGTLKAALVSIVFAIIIG 88

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            +L +      R    K  +    + +  F    +P L+L+   Y +     ++      
Sbjct: 89  ALLGV-----GRLSKNKAIRWFCGIIVEFF--RAIPVLILMIFAYSVFATYAIVPSAQL- 140

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   F  +   L+ Y  + IAE +R+G++++P GQ EAA ALGL+HR+    +LLP
Sbjct: 141 -------GFAGVVFGLTMYNGSVIAETLRAGILSLPTGQSEAAEALGLSHRQTIWNILLP 193

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+ +++P L SQ +  LK+++L   + + ++V  G    +     +  +++   I +++
Sbjct: 194 QAVATMLPALISQLVIALKDTALGYMILYVEVVRSGLMSASYYRNYLPALVVVAIIMIAI 253

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           +  ++    R+  ++     +
Sbjct: 254 NFGLSRLAERIERQLRAGRAR 274



 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R  N  V I   ++   +  W +  + +N + +              
Sbjct: 4   RATVLYDAPGPKARQFNRIVTIATFVIAIAVIAWVLKVLGDNGQLA-------------- 49

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
               +   P+   +++ T IL G   T   A   ++ A IIG L+G GRLS NK + W C
Sbjct: 50  ---AEKWTPFLKSTTWTTYILPGLWGTLKAALVSIVFAIIIGALLGVGRLSKNKAIRWFC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            + VE FR IP L+++ F Y    +   +P   +     +F
Sbjct: 107 GIIVEFFRAIPVLILMIFAYSVFATYAIVPSAQLGFAGVVF 147


>gi|126179310|ref|YP_001047275.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanoculleus marisnigri JR1]
 gi|125862104|gb|ABN57293.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Methanoculleus marisnigri JR1]
          Length = 228

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 3/208 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL--YISTFLIFGLPTLVLIALKYQLHF 246
           I + + + G+V++L     S  F    G A+ +   Y +  + +   T V +     L  
Sbjct: 10  ILLPALMQGLVVTLQLIACSAPFGLALGIAVAVGRQYGNPVISWICKTFVFLIKGTPLLL 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +L       G T +  F++  +       A+ AE +R  LI++  GQM AA ALG+T
Sbjct: 70  LLFILYFGLPAVGITFT-AFVASVVGFILCNGAYNAEYIRGALISIKEGQMVAAQALGMT 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+LPQA+R  IP L+++++ L+K SSLA  +   +L   G  +  +     E 
Sbjct: 129 RWQAIRNVILPQALRRAIPGLSNEFIYLIKYSSLAYMITVIELSGAGKLVATKYFTYTES 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 +YL L  +    +N L  ++A+
Sbjct: 189 FAAVGIVYLVLVTITTFAVNILEKRVAV 216



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 62/161 (38%), Gaps = 5/161 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A++ G V T  L          +G  V  GR   N +++WIC+ +V + +  P L+++F 
Sbjct: 14  ALMQGLVVTLQLIACSAPFGLALGIAVAVGRQYGNPVISWICKTFVFLIKGTPLLLLLFI 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVLSLFA 204
           LY  + +V       +    G  L N   +   +     +      V +  LG+  + + 
Sbjct: 74  LYFGLPAVGITFTAFVASVVGFILCNGAYNAEYIRGALISIKEGQMVAAQALGM--TRWQ 131

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
              +    +   +A+P L      +    +L  +    +L 
Sbjct: 132 AIRNVILPQALRRAIPGLSNEFIYLIKYSSLAYMITVIELS 172


>gi|77459312|ref|YP_348819.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77383315|gb|ABA74828.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 220

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 14/227 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +               T+ ++   + + G V+ +FA  L   + +   +A    Y+   
Sbjct: 7   WLHELWIAREALWQGFLTSVQVSALAILFGTVIGVFAG-LVLTYGKFWMRAPFRFYVDLI 65

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +  LVL            +               F +  + L+ +  + +AEIVR 
Sbjct: 66  RGTPVFVLVLACFYMAPALGWQI-------------SAFQAGALGLTLFCGSHVAEIVRG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L A+PRGQMEA  A+GLT  ++   VLLPQA+R I+P   +    ++K S+L   +G A
Sbjct: 113 ALQALPRGQMEAGKAIGLTFYQSLGYVLLPQALRQILPTWVNSSTEIVKASTLLSVIGVA 172

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L+     II +T   +E  L   F++  ++  I L    +  ++AL
Sbjct: 173 ELLLSTQQIIARTFMTLEFYLFAGFLFFVINYGIELLGRHIEKRVAL 219



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 31/82 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ +  ++   ++  T+IG   G         +    R YV++ R  P  V++  
Sbjct: 17  ALWQGFLTSVQVSALAILFGTVIGVFAGLVLTYGKFWMRAPFRFYVDLIRGTPVFVLVLA 76

Query: 148 LYKSVLSVLPIPDHSIVLPFGM 169
            +    ++            G+
Sbjct: 77  CFYMAPALGWQISAFQAGALGL 98


>gi|271970517|ref|YP_003344713.1| glutamine ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270513692|gb|ACZ91970.1| glutamine ABC transporter, permease protein, putative
           [Streptosporangium roseum DSM 43021]
          Length = 282

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 19/249 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
            +  P         F      + L         N KIF+ +  L +++ L    L+R+  
Sbjct: 46  FTNSPGWPRVQETFFNPEQFVKALPDVLSGFLLNIKIFLIAEPLILIVGLLV-ALARNLK 104

Query: 213 EKT---GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS- 268
                  +AL + Y   F          I + Y + F  P L       G    P  ++ 
Sbjct: 105 APVFFPLRALAVAYTDVFRGVPT-----ILVIYLVGFGLPAL-------GLQGMPTDLAT 152

Query: 269 -LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              IAL+    A++AE+ R+G+ +V   Q  AA +LGL+H +  R V++PQA R ++PPL
Sbjct: 153 LGVIALTLSYGAYVAEVFRAGIDSVHPSQWAAARSLGLSHGRTMRYVVVPQAARRVVPPL 212

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            + +++L K+++L   +G  + +         T       L    +++ L+I +A F + 
Sbjct: 213 LNDFVSLQKDTALVATIGPLEALRQAQIHAASTFNYTP-YLAAALLFILLTIPMARFTDY 271

Query: 388 LNAKIALKE 396
           L A+   + 
Sbjct: 272 LAARSQRRR 280


>gi|327189353|gb|EGE56521.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 268

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 5/217 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + +  +G+ +  F   L +   EK  +    +Y + F   GLP L+ + + Y 
Sbjct: 54  QVTVSVAIVTLPIGLAIG-FLVALGQQSEEKPLRLAAGIYTTIF--RGLPELLTLFIIYY 110

Query: 244 LH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                 + +L    ++G       F++  IALS   +A+ +E++ S   A+P+GQ EA  
Sbjct: 111 GMQMLIQSLLELAGYVGPPIEINAFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGD 170

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LGL   +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD++      +  T 
Sbjct: 171 SLGLHRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTK 230

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +      I   +YL L+I+ +  +  ++      E +
Sbjct: 231 EPFFFYGIACCLYLVLAILSSFLLVHIDRWAKRSEVR 267



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 62/169 (36%), Gaps = 7/169 (4%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
             Q  +    D+ +   I +G   T  +A   +     IG LV  G+ S  K +     +
Sbjct: 32  FAQSTILACGDTGWGDEIALGLQVTVSVAIVTLPIGLAIGFLVALGQQSEEKPLRLAAGI 91

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR +P L+ +F +Y  +  ++        L          +          A   V
Sbjct: 92  YTTIFRGLPELLTLFIIYYGMQMLI------QSLLELAGYVGPPIEINAFLAGVIALSVV 145

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           FS     VL L A R       + G +L L    T  +  LP LV IAL
Sbjct: 146 FSAYCSEVL-LSAFRAIPKGQYEAGDSLGLHRGRTLRLIILPQLVRIAL 193


>gi|110347223|ref|YP_666041.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110283334|gb|ABG61394.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chelativorans sp. BNC1]
          Length = 362

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 14/248 (5%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
            L  + +    + L  G F      +     +     + VF+  LG   ++    L R  
Sbjct: 125 GLVWVAMMVVVLWLMGGGFGLAAVPTSSWGGLPVTLILTVFAIGLGFPAAILL-ALGRRS 183

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           +    + L +L+I T             L          +    F+  + +  +F+   I
Sbjct: 184 NLPVVRTLSVLFIETIR----------GLPLLSLLLVASILLPLFLPEALLPDKFVRALI 233

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+ + AA++AE++R GL ++P GQ EAA ALGL + K  RL++LPQA+R +IP LT+  
Sbjct: 234 ALTIFAAAYLAEVLRGGLQSIPSGQSEAAEALGLGYWKTQRLIILPQAIRIVIPALTNTI 293

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRL 388
           + ++KN+SL + VG  DL+S G   ++         E  L    IY +L+   A F + L
Sbjct: 294 IVMIKNTSLVLVVGLFDLISSGKAALSDPAWPAPSTETFLFIGLIYFALAFSFARFADFL 353

Query: 389 NAKIALKE 396
               A K 
Sbjct: 354 ERSGAEKR 361


>gi|307705125|ref|ZP_07642002.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|307621321|gb|EFO00381.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 213

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS  ++T+   A + +FS  LG++++       +  H        L+ I  +++ G P L
Sbjct: 12  LSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKLLHH-------LINIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +P+G
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFSPFDTVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 174 AANRDASLVPMFL-AGAIYLILIGIVTILAKKVEKKYSYYR 213



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G L+        KL+  +  +Y+ + R  P L+ + F+
Sbjct: 11  LLSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S+    D          LN 
Sbjct: 71  YYVLPSIGIRLDRLPAAIIAFVLNY 95


>gi|260597265|ref|YP_003209836.1| arginine transporter permease subunit ArtM [Cronobacter turicensis
           z3032]
 gi|260216442|emb|CBA29555.1| Arginine transport system permease protein artM [Cronobacter
           turicensis z3032]
          Length = 222

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 99/230 (43%), Gaps = 10/230 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L     ++   A     + VL ++ ++  T        KT   + ++     L
Sbjct: 2   LDYLPELLKGLHTSLTLTAASIAVALVLSVIFTIVLT-------LKTPVLVWIVRGYITL 54

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P LV I L Y      P L  + ++      P ++   +ALS  +AA+  ++    
Sbjct: 55  FTGTPLLVQIFLIYYGPGQFPSLQNYPWLWHVLSEP-WLCALVALSLNSAAYTTQLFYGA 113

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +
Sbjct: 114 IRAIPEGQWQSCGALGMSRKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLME 172

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++     +  +T   + +      IYL ++ ++ L M  +  +    E++
Sbjct: 173 VMGYSQLLYGRTYDVM-VFGAAGVIYLIVNGLLTLLMRVIERRALAFERR 221



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + +  A ++  +          ++ WI R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTAASIAVALVLSVIFTIVLTLKTPVLVWIVRGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++  +           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPSLQNYPWLWHVLSEPWLCALVALSLNSAAYTTQLFYGAIRAI 117


>gi|255521708|ref|ZP_05388945.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J1-175]
          Length = 429

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 7/229 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F + +    +      +     I   S + G +L +    L R +       L  +YIS 
Sbjct: 5   FDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLL-SLPRIYKIPVLDQLARVYISF 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G P +V + + +   +  P L     I  S + P   +     +  +AA IAE++R
Sbjct: 64  F--RGTPIMVQLFIVF---YGIPALSSIVGIDLSQMDP-LYAAIATYALSSAATIAEVIR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ +V  GQ EAA ++GL+ R+    ++LPQA+   +P   +  +  LK++SLA ++G 
Sbjct: 118 AGVNSVDAGQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGNLVIGYLKDTSLAFSIGV 177

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            D+   G T+I  +  A+E+ +    IY   ++++      +  ++  K
Sbjct: 178 MDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKWIENELKKK 226



 Score = 95.8 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 3/176 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 256 MAMLKTIPLTLAMTFFPILFGFIIAIGMT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 314

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 315 MLIYLGIPLLVDF-LSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIG 373

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  
Sbjct: 374 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITG 429



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 35/75 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++    +I   I+G L+   R+    ++  + RVY+  FR  P +V +F ++  + ++
Sbjct: 24  TLYILALSLIFGFILGVLLSLPRIYKIPVLDQLARVYISFFRGTPIMVQLFIVFYGIPAL 83

Query: 156 LPIPDHSIVLPFGMF 170
             I    +     ++
Sbjct: 84  SSIVGIDLSQMDPLY 98


>gi|149204304|ref|ZP_01881271.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. TM1035]
 gi|149142189|gb|EDM30236.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           sp. TM1035]
          Length = 218

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 13/227 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +    L F    +  +  +   + + GI L      L+R    K        Y++
Sbjct: 3   DFDFDVILNNLPFLWQGLQLSLWLTFLAVLGGIALGTLL-ALARLSGIKPLAIFAAAYVN 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                      LI + +  +F  P+       G       F S  IA   + AA+ +EI+
Sbjct: 62  LIRSVP-----LILVIFWFYFLVPLALGRPIGG-------FYSALIAFVMFEAAYYSEIM 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V  GQ+ A  A GL + +  R ++LPQA R++IP L +Q + L +++SL   V 
Sbjct: 110 RAGIQSVRTGQVHAGQATGLGYWQIQRYIVLPQAFRNMIPILVTQGIILFQDTSLVFVVS 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             DL++    +    G+ +E+ L    +Y  +    +LF+ RL A++
Sbjct: 170 LRDLMTASSIVARTEGRLVEMYLFAALVYFVICFSGSLFVRRLQARM 216



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 2/153 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   + WL F  ++    +GTL+   RLS  K +A     YV + R++P ++VIF+ 
Sbjct: 16  LWQGLQLSLWLTFLAVLGGIALGTLLALARLSGIKPLAIFAAAYVNLIRSVPLILVIFWF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  V   L  P          F+      +  +       +       G    L   ++ 
Sbjct: 76  YFLVPLALGRPIGGFYSALIAFVMFEAAYYSEIMRAGIQSVRTGQVHAGQATGLGYWQIQ 135

Query: 209 RH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           R+    +     +P+L     ++F   +LV + 
Sbjct: 136 RYIVLPQAFRNMIPILVTQGIILFQDTSLVFVV 168


>gi|53719999|ref|YP_108985.1| histidine transport system permease [Burkholderia pseudomallei
           K96243]
 gi|126454676|ref|YP_001067041.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1106a]
 gi|134277781|ref|ZP_01764496.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|167720504|ref|ZP_02403740.1| histidine transport system permease protein [Burkholderia
           pseudomallei DM98]
 gi|167816701|ref|ZP_02448381.1| histidine transport system permease protein [Burkholderia
           pseudomallei 91]
 gi|167846609|ref|ZP_02472117.1| histidine transport system permease protein [Burkholderia
           pseudomallei B7210]
 gi|167895192|ref|ZP_02482594.1| histidine transport system permease protein [Burkholderia
           pseudomallei 7894]
 gi|167903578|ref|ZP_02490783.1| histidine transport system permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167919825|ref|ZP_02506916.1| histidine transport system permease protein [Burkholderia
           pseudomallei BCC215]
 gi|217421178|ref|ZP_03452683.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|237813149|ref|YP_002897600.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei MSHR346]
 gi|242317526|ref|ZP_04816542.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254184252|ref|ZP_04890842.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1655]
 gi|254195732|ref|ZP_04902158.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei S13]
 gi|254258433|ref|ZP_04949487.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1710a]
 gi|52210413|emb|CAH36395.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|126228318|gb|ABN91858.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106a]
 gi|134251431|gb|EBA51510.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 305]
 gi|169652477|gb|EDS85170.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei S13]
 gi|184214783|gb|EDU11826.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1655]
 gi|217396590|gb|EEC36607.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 576]
 gi|237505402|gb|ACQ97720.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei MSHR346]
 gi|242140765|gb|EES27167.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei 1106b]
 gi|254217122|gb|EET06506.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1710a]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + V S   G V ++    ++R    +        Y  T++  G P
Sbjct: 14  YWDGQRMSGLAVTLWLLVASLGAGFVCAVPL-AVARVSKNRWLSTPVRFY--TYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + L Y   +    + +  ++  +     F    +A +  T A+  EI    + A+ 
Sbjct: 71  LYVQLLLLYTGMYSLAFVREHAWLD-AFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIA 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R V+LP ++R  +P  +++ + +L  +++A      D++ V 
Sbjct: 130 HGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTATVPDILKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + T  A +   I   IYL++S  +     R    
Sbjct: 190 RDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    +    +   R+S N+ ++   R Y  VFR  P  V +  LY
Sbjct: 20  MSGLAVTLWLLVASLGAGFVCAVPLAVARVSKNRWLSTPVRFYTYVFRGTPLYVQLLLLY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
             + S+  + +H+ +  F     +  +    L             +  I 
Sbjct: 80  TGMYSLAFVREHAWLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIA 129


>gi|83718785|ref|YP_442304.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|167619282|ref|ZP_02387913.1| histidine transport system permease protein [Burkholderia
           thailandensis Bt4]
 gi|83652610|gb|ABC36673.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 90/224 (40%), Gaps = 8/224 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            ++ + + +S   +T+        F FV  + L++     +R                T+
Sbjct: 12  FLYWDGQRMSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPV-------RFYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +    +    F+  +          +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLLIYTGMYSLAFVRDHAFLD-TFFRSGMNCAILAFALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+  G++EAA A G++     R V+LP ++R  +P  +++ + +L  +++A      
Sbjct: 124 AIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ V     + T  A +   I   IYL++S  +     R    
Sbjct: 184 DILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    +    +   R+S N+ ++   R Y  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVASLGFGFVCAVPLAVARVSKNRWLSTPVRFYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
             + S+  + DH+ +  F     N  +    L             +  I 
Sbjct: 80  TGMYSLAFVRDHAFLDTFFRSGMNCAILAFALNTCAYTTEIFAGAIRAIA 129


>gi|148543750|ref|YP_001271120.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184153156|ref|YP_001841497.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|194468312|ref|ZP_03074298.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|227363270|ref|ZP_03847402.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|325682122|ref|ZP_08161640.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148530784|gb|ABQ82783.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183224500|dbj|BAG25017.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|194453165|gb|EDX42063.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|227071726|gb|EEI10017.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|324978766|gb|EGC15715.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 215

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             M   +  L           +IF ++ V  + L +    L      K  K +  L I  
Sbjct: 1   MSMQYISEILPSLFQGAALTLQIFFWTLVGSLPLGILV-SLGLTSKIKPLKWI--LEIYV 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           +L+ G P L+ +   +   +  P++          V   + +  +A     AA+ AEI R
Sbjct: 58  WLMRGTPLLLQLIFVF---YGLPII--------GIVFERYDAALVAFILNYAAYFAEIFR 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G  +V +GQ EAA  L L++ +  R +++PQ ++ +IP + ++ +NL+K+SSL   +G 
Sbjct: 107 GGFQSVDQGQFEAARVLRLSYWQTLRKIIIPQVIKIVIPSIGNEVINLVKDSSLVYVIGL 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            DL+  G    ++    +  +++   IYL L  +  L + ++    A
Sbjct: 167 GDLLRAGNVATSRD-VTLVPLMLVGLIYLILVGICTLILRQVEKCYA 212



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 38/91 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S    ++  G   T  + F  ++ +  +G LV  G  S  K + WI  +YV + R  P L
Sbjct: 7   SEILPSLFQGAALTLQIFFWTLVGSLPLGILVSLGLTSKIKPLKWILEIYVWLMRGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + + F++  +  +  + +          LN 
Sbjct: 67  LQLIFVFYGLPIIGIVFERYDAALVAFILNY 97


>gi|329937972|ref|ZP_08287454.1| amino acid ABC transporter transmembrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302929|gb|EGG46818.1| amino acid ABC transporter transmembrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 251

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 13/220 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +         +    ++   S +L   +S     ++R       + L   Y   F   
Sbjct: 1   MTSGLWELVLKGVWVTVQLLFLSALLATGVSFVVG-IARTHRLWIVRFLAGFYTEVF--R 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G   L++I   + + F  P    +  +          +  +AL     A+ AEIVR  L 
Sbjct: 58  GTSALIMI---FWVFFVLPPAFGWQLV-------PLWAGTLALGLTYGAYGAEIVRGALG 107

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV   Q E  +AL  T  +  R +LLPQA+  +IPP ++  + LLK ++L   +G  DL 
Sbjct: 108 AVDPAQREGGVALNFTPWQRMRKILLPQAVPEMIPPFSNLLIELLKGTALVSVMGMGDLT 167

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                +     ++ EI    + IY  ++ ++   M RL  
Sbjct: 168 FSAKLVRLALQESAEIYTYVLLIYFVIAFLLTRIMRRLER 207



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L F   + AT +  +VG  R     +V ++   Y EVFR    L++I
Sbjct: 6   WELVLKGVWVTVQLLFLSALLATGVSFVVGIARTHRLWIVRFLAGFYTEVFRGTSALIMI 65

Query: 146 FFLYKSVLSVLPI 158
           F+++  +      
Sbjct: 66  FWVFFVLPPAFGW 78


>gi|225374846|ref|ZP_03752067.1| hypothetical protein ROSEINA2194_00469 [Roseburia inulinivorans DSM
           16841]
 gi|225213307|gb|EEG95661.1| hypothetical protein ROSEINA2194_00469 [Roseburia inulinivorans DSM
           16841]
          Length = 216

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 104/222 (46%), Gaps = 11/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +S     M T  +IF+ + +  + L L      R       + +  +YIS  ++ G P 
Sbjct: 6   MISQLGSGMMTTIQIFLLTLIFSLPLGLLV-AFGRMSKNVVIRTITKIYIS--IMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ + + Y   +       + F    + S    ++ IA +   AA+ AEI R G+ ++P 
Sbjct: 63  MLQLLVVYFGPY-------YIFGVNISSSYRAYAVVIAFAINYAAYFAEIYRGGIESMPV 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG    +    ++LPQ ++ I+P +T++ + L+K++SLA ++ +A++ S   
Sbjct: 116 GQYEAAKVLGYGKTQTFVKIILPQVIKRILPSVTNEVITLVKDTSLAFSIAYAEMFSQAK 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   + +++   +     Y   + ++A  M     K++   
Sbjct: 176 ALAA-SQKSMIPFVAAAIFYYVFNYVVAFIMEFFEKKMSYYH 216



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 32/63 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +    +I +  +G LV  GR+S N ++  I ++Y+ + R  P ++ +  +
Sbjct: 10  LGSGMMTTIQIFLLTLIFSLPLGLLVAFGRMSKNVVIRTITKIYISIMRGTPLMLQLLVV 69

Query: 149 YKS 151
           Y  
Sbjct: 70  YFG 72


>gi|118590274|ref|ZP_01547677.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118437246|gb|EAV43884.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 215

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 2/214 (0%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M     + + +   G+ L  F   L++   E + +    +Y + F       L L  + +
Sbjct: 1   MVVTVCLAIVTLPFGLFLG-FLIALAKKSSEPSLRLAANIYTTLFRGL-PELLTLFLVYF 58

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L     VL +            F++  IALS   +++ +E   S    +P+GQ E   A
Sbjct: 59  GLQIAVQVLLKMAGFDFYFEVNSFIAGVIALSFVFSSYTSEAFLSAFRGIPQGQYEGGYA 118

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+  K  RLV+LPQ +R  +P L + +L LLK++SL   +G +D++   G     T +
Sbjct: 119 LGLSKGKTLRLVVLPQLIRLALPALGNSWLVLLKDTSLVSVIGLSDVMRQSGIAARVTKE 178

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 I   IYL L+++ +  + R+       E
Sbjct: 179 PFMFFGIACLIYLVLAMISSTGLVRIERWSKRGE 212


>gi|300715837|ref|YP_003740640.1| Glutamate/aspartate transport system permease [Erwinia billingiae
           Eb661]
 gi|299061673|emb|CAX58789.1| Glutamate/aspartate transport system permease [Erwinia billingiae
           Eb661]
          Length = 246

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + V ++++ +++      L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWLWSGFQVTIAVSVCAWIIALLVGSLFGIL-RTVPNRLLSTL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              Y+  F    +P +V   + Y +        +  +           F    + L  +T
Sbjct: 65  GTCYVELF--RNIPLIVQFFIWYLVIPELLPESISTWFKSELDPNIQFFTCSVLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++P GQ  A +A+GLT  +  R VLLP A R I+PP+TS+ LNL+KN
Sbjct: 123 AARVCEQVRAAIQSLPSGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMLNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++I+I L M+ +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAYESFTAITLAYVGINIVIMLLMSLVERKVRL 239



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  ++    I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTIAVSVCAWIIALLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+L++ +   YVE+FRNIP +V  F  Y  +  +LP    + 
Sbjct: 53  LRTVPNRLLSTLGTCYVELFRNIPLIVQFFIWYLVIPELLPESISTW 99


>gi|258623969|ref|ZP_05718922.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603]
 gi|258583763|gb|EEW08559.1| arginine ABC transporter, permease protein [Vibrio mimicus VM603]
          Length = 229

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y        L   +FI  S     F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLFLITGDFIEIS----PFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPAHAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSVQ 219


>gi|56478020|ref|YP_159609.1| glutamate/aspartate ABC transporter transmembrane protein
           [Aromatoleum aromaticum EbN1]
 gi|56314063|emb|CAI08708.1| putative ABC transporter protein,probable glutamate/aspartate
           transmembrane subunit [Aromatoleum aromaticum EbN1]
          Length = 247

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 21/246 (8%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                        G+   +  LS    T   +      +  LG  L +  T   R     
Sbjct: 4   HWDWLFFFRETDDGLKYYDWVLSGLGWTTLVSLASLAVALALGSALGVMRTTPKRWLVAI 63

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              +    + +PL+       F +P LV   L   +  D P +               + 
Sbjct: 64  GDAYVDVFRNIPLIVQLFMWFFVVPELVPDRLGMWMKQDLPYV---------------VI 108

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  YTAA IAE V++G+ ++ RGQ +A +ALGLT  +  R V LP A R ++P +T
Sbjct: 109 AVVGLGLYTAARIAEQVKAGINSLSRGQRDAGLALGLTEWQTYRHVRLPMAYRIVLPAMT 168

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +N+ KNS++  AVG  +L      II +T Q  EI ++    Y +L+ ++   +  +
Sbjct: 169 SEAMNIFKNSAVTYAVGILELYFQYKQIIEKTSQVFEITIVVTLAYFALAFLMNRLLAFI 228

Query: 389 NAKIAL 394
             +  +
Sbjct: 229 ERRTRV 234



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 41/87 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  ++ + +  A  +G+ +G  R +  + +  I   YV+VFRNIP +V 
Sbjct: 20  YYDWVLSGLGWTTLVSLASLAVALALGSALGVMRTTPKRWLVAIGDAYVDVFRNIPLIVQ 79

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           +F  +  V  ++P      +     ++
Sbjct: 80  LFMWFFVVPELVPDRLGMWMKQDLPYV 106


>gi|13473259|ref|NP_104826.1| glutamine ABC transporter (integral membrane protein)
           [Mesorhizobium loti MAFF303099]
 gi|14024007|dbj|BAB50612.1| glutamine ABC transporter (integral membrane protein)
           [Mesorhizobium loti MAFF303099]
          Length = 221

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 13/224 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +  + ++ V S  +G V+ L           +  +A+   Y+       L
Sbjct: 11  WRHFDKLWGGLLLSLELAVISIAIGTVIGLVLAVWY-VSAGRVVRAIIAAYVEFIRNVPL 69

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV     Y + +  P +    +           S  + LS Y+ A++ E+ RSGL AV
Sbjct: 70  ILLV-----YLVFYGVPTVVDLAY-------SAPTSFVLTLSVYSGAYLVEVFRSGLEAV 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ++A  A+GLT  +    V LP  +R  +P L++ +++L K++S+A  +   +L   
Sbjct: 118 PRGQLDAGKAIGLTPWQRLIHVRLPTMLRITLPALSNTFISLFKDTSIASVISVPELTFG 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I   T + +E+ L+   +YL    ++   +  +  +     
Sbjct: 178 AQWINFNTFRIVEVYLVTTAMYLLTGYILLFGLRLVERRFRAAR 221



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 40/79 (50%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     +   +  G + +  LA   +   T+IG ++    +SA ++V  I   YVE  
Sbjct: 5   LNFNLIWRHFDKLWGGLLLSLELAVISIAIGTVIGLVLAVWYVSAGRVVRAIIAAYVEFI 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN+P +++++ ++  V +V
Sbjct: 65  RNVPLILLVYLVFYGVPTV 83


>gi|300716001|ref|YP_003740804.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299061837|emb|CAX58953.1| Polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 238

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 94/207 (45%), Gaps = 4/207 (1%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP-V 250
            + ++G V+       ++    +  + L   Y   F   G+P L++I L Y         
Sbjct: 28  VAMMVGAVVG-SGVAAAKLSPRRPVRWLGDGYSVIF--RGIPELLIIYLFYFGGSGLITQ 84

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +GQ     G    P F+   +A+   +A++ AE+ R+G +A+  G++EAA A+G+   + 
Sbjct: 85  IGQMFGADGFIEVPPFLIGALAIGLISASYQAEVFRAGRLALNSGEIEAAQAIGMPKWRI 144

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + ++LPQ +R  +P L++ +   LK+S+L    G  +L+         T Q     LI 
Sbjct: 145 LQRIILPQVVRYALPGLSNVWQMSLKDSALISVTGIVELMRASQVAAGSTRQYFTFYLIG 204

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
              YL L+++      +   ++    +
Sbjct: 205 GTCYLLLTVLSNTAFKKAEQRLGRAHQ 231


>gi|210620908|ref|ZP_03292325.1| hypothetical protein CLOHIR_00268 [Clostridium hiranonis DSM 13275]
 gi|210155120|gb|EEA86126.1| hypothetical protein CLOHIR_00268 [Clostridium hiranonis DSM 13275]
          Length = 206

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 17/210 (8%)

Query: 187 AKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            KI V  F + +VLS+       L R       + +   YI   ++ G P L+ + + + 
Sbjct: 8   IKIVVALFAITLVLSIPAGIGVALLRISKNVIIRKVTSFYI--LIMRGTPLLLQMIVIF- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++              F +  +A      A+ AEI R G+ ++ +GQ EAA  L
Sbjct: 65  --YGLPLI--------GITFDRFTAGAVAFFFNYTAYFAEIFRGGIQSIDKGQYEAAYVL 114

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G       + ++LPQ ++ ++ P++++ + L+K++SL   +G  D++ +    +N+ G  
Sbjct: 115 GFDKVSMYKRIILPQVVKRVLAPVSNEVITLVKDTSLVYILGLNDILRISQIAMNREGSL 174

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  +     IYL    ++     +L  + +
Sbjct: 175 MP-LAWAGLIYLVFIAILTKVFEKLEKRYS 203



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 32/103 (31%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G      L    ++ +   G  V   R+S N ++  +   Y+ + R  P L+ +
Sbjct: 1   MRIMIEGIKIVVALFAITLVLSIPAGIGVALLRISKNVIIRKVTSFYILIMRGTPLLLQM 60

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             ++  +  +    D         F N              + 
Sbjct: 61  IVIFYGLPLIGITFDRFTAGAVAFFFNYTAYFAEIFRGGIQSI 103


>gi|209521573|ref|ZP_03270272.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209497984|gb|EDZ98140.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 90/230 (39%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +      +F + +GLS   +T+          FV  + L++      R            
Sbjct: 6   NQFWRAYLFWDGQGLSGLAVTLWLLVASIAIGFVCAVPLAVARVSKKRWLSTPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             + T++  G P  V + L Y   +    +   + +  +     F    +A +  T A+ 
Sbjct: 60  -RLYTYVFRGTPLYVQLLLIYTGVYSLAFVRSHSLLD-AFFRSGFHCAILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + +   G++EAA A G++     R +++P A+R  +P  +++ + +L  +++A
Sbjct: 118 TEIFAGAIRSTSHGEVEAARAYGMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T Q      +   +YL +S  +     R   +
Sbjct: 178 FTATVPDILKVARDANSATYQPFNAFGLAALLYLVVSFALVALFRRAERR 227



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 2/101 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASIAIGFVCAVPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             V S+      S  L    F +    +     ++T A   
Sbjct: 80  TGVYSLAF--VRSHSLLDAFFRSGFHCAILAFALNTCAYTT 118


>gi|188534471|ref|YP_001908268.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis
           Et1/99]
 gi|188029513|emb|CAO97390.1| Glutamate/aspartate transport system permease [Erwinia tasmaniensis
           Et1/99]
          Length = 225

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    +I   + V GI+       + R    K       +Y
Sbjct: 1   MYQFDWSTIVPNLPWLWNGMVITLQITFTAIVFGIIWGTML-AVMRLSSFKPISWFAKIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGILSIARGQGNAALALGMTRWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI    G  IE++L    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLLVSYLKKK 222



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 9/161 (5%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T  + F+ ++   I GT++   RLS+ K ++W  ++YV +FR++P ++V+ +
Sbjct: 15  WLWNGMVITLQITFTAIVFGIIWGTMLAVMRLSSFKPISWFAKIYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG-----IVLSL 202
            Y  V S L              ++             +  I      +        L+L
Sbjct: 75  FYLVVPSFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGILSIARGQGNAALAL 134

Query: 203 FATRLSRHFHEKTGKAL----PLLYISTFLIFGLPTLVLIA 239
             TR          +A     PLL     ++F   +LV + 
Sbjct: 135 GMTRWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVL 175


>gi|50123396|ref|YP_052563.1| amino acid ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613922|emb|CAG77375.1| probable amino acid ABC transporter, permease protein
           [Pectobacterium atrosepticum SCRI1043]
          Length = 231

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 5/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F  F+  R             K+ V +++L + ++L    + R    +    L   
Sbjct: 1   MALDFTTFMTGRYADVIVEGAMITLKLAVGAWLLAMFIALILLVI-RLTERRVAIWLVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S      +PTL+ + + Y       +L +   +  ++ + EF+    AL    AA+ +
Sbjct: 60  YVS--YHRNVPTLIQLMMWY--FAIPTLLPESLQMWINSFNAEFLFSMFALGLCQAAYFS 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSGL A+P GQ EA+ ALG++  ++ R V+LPQ +R+ +P L +  + L KN+SLA+
Sbjct: 116 EDIRSGLRAIPDGQNEASRALGMSFMRSMRSVILPQGIRNALPSLINHTVLLFKNTSLAM 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G A+L  +   + NQT +  E  LI    YL  S+++      L+        +
Sbjct: 176 VIGVAELTYITRDLENQTFRTFEAYLIGTLGYLIFSLLLMGAGALLSRHYQRVYAR 231



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              YA  I+ G + T  LA    + A  I  ++   RL+  ++  W+   YV   RN+P 
Sbjct: 10  TGRYADVIVEGAMITLKLAVGAWLLAMFIALILLVIRLTERRVAIWLVAAYVSYHRNVPT 69

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L+ +   Y ++ ++LP      +  F
Sbjct: 70  LIQLMMWYFAIPTLLPESLQMWINSF 95


>gi|323525628|ref|YP_004227781.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382630|gb|ADX54721.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 87/218 (39%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + V S  +G  L++    ++R   ++       LY  T++  G P
Sbjct: 14  YWDGQRMSGLAVTLWLLVASVGIGFCLAIPL-AVARVSKKRWLSTPVRLY--TYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + L Y   +    +     +  +     F    +A +  T A+  EI    + +  
Sbjct: 71  LYVQLLLIYTGMYSLEFVRSHQLLD-AFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTS 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R +++P A+R  +P  +++ + +L  +++A      D++ V 
Sbjct: 130 HGEVEAARAYGMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + T Q+ +   +   IYL +S  +     R    
Sbjct: 190 RDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERH 227



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVASVGIGFCLAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHS 162
             + S+  +  H 
Sbjct: 80  TGMYSLEFVRSHQ 92


>gi|256784801|ref|ZP_05523232.1| glutamate permease [Streptomyces lividans TK24]
          Length = 295

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 17/242 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                +        +         T+   A   V +  LG VL +   RLS H   +   
Sbjct: 47  WAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIA--RLSDHAWVRIPV 104

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+ + +        +P LVL+     L  +        +   S+      ++   L  Y 
Sbjct: 105 AIVVEF-----FRSIPVLVLMIFGLALFAE--------YTDVSSDDRPLYAVVTGLVLYN 151

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A+ +AEIVR+G++A+P+GQ E A+A+GL   ++ RL+LLPQA+ +++P + SQ + +LK+
Sbjct: 152 ASVLAEIVRAGILALPKGQAEGAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKD 211

Query: 338 SSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++L    + F +L++   T+    G   I    +   IY++L+  +  F + L  ++   
Sbjct: 212 TALGGAVLTFPELLASANTMSGYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRA 271

Query: 396 EK 397
           +K
Sbjct: 272 KK 273



 Score = 64.2 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/91 (30%), Positives = 44/91 (48%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E+   +  +  + +TSD  ++T I  G  NT   A   M+ A  +G ++G  RLS + 
Sbjct: 39  LDEKGQLDWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 98

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154
            V     + VE FR+IP LV++ F       
Sbjct: 99  WVRIPVAIVVEFFRSIPVLVLMIFGLALFAE 129


>gi|227822266|ref|YP_002826237.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
 gi|227341266|gb|ACP25484.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
          Length = 276

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 7/215 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
               + + S  +G VLS F   L R    +    +  +Y+  F   G P +  + L Y  
Sbjct: 68  VTLLLVISSIPMGAVLS-FPVALGRMSKNRFWSWIAYIYVYFF--RGTPLIAQLFLVYYG 124

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L   +P L              +       +  TAA+ AEI+R  + +VPRGQ E A AL
Sbjct: 125 LGSFRPQLESIGLWW--FFRDAWNCALFTFTLNTAAYQAEILRGAIESVPRGQHEGAAAL 182

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL  R A   V+LPQAM   + P  ++ + ++K S++   V   DL+       ++T   
Sbjct: 183 GLPERIAFFKVILPQAMIVALRPYGNEIILMIKGSAIVAIVTVFDLMGETRRAFSRTFD- 241

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++ +    +YL +   +      + A++    K+
Sbjct: 242 FQMYVWAAVLYLLIVEFLRNIWAWIEARLTRHLKR 276



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 40/97 (41%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y  + L G   T  L  S +    ++   V  GR+S N+  +WI  +YV  FR  P +
Sbjct: 56  SRYGPSFLSGLGVTLLLVISSIPMGAVLSFPVALGRMSKNRFWSWIAYIYVYFFRGTPLI 115

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
             +F +Y  + S  P  +   +  F     N  L   
Sbjct: 116 AQLFLVYYGLGSFRPQLESIGLWWFFRDAWNCALFTF 152


>gi|254197953|ref|ZP_04904375.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|169654694|gb|EDS87387.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
          Length = 315

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 4/219 (1%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215
             D  +   + M+L    L    L++       +  F L I       + R +   +   
Sbjct: 74  EMDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVA 133

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS 
Sbjct: 134 FRNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLAQRWPSFEFVAGWLGLSG 191

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+
Sbjct: 192 YTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLI 251

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           KNSSL +A+G A+L      +  +T +      +   +Y
Sbjct: 252 KNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLY 290



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 83  YLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 142

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 143 LLFWYFGVAALLPEPAMAW 161


>gi|59713573|ref|YP_206348.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114]
 gi|59481821|gb|AAW87460.1| amino acid ABC transporter permease protein [Vibrio fischeri ES114]
          Length = 286

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 10/228 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-------FATRLSRHFHEKTGKALPLLYIS 225
                    T+       +F+   G++L L           LS  + +      PL++I 
Sbjct: 58  PYFFDGLFSTLRLTFWGMLFAICFGVLLGLGRRSNFTVIRALSNSYIQLIRNIPPLVFIF 117

Query: 226 TFLIFGLPTLVLIALKYQL---HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            F  F    LV +     L   H     L Q    G + +     +  + +   +AA+I 
Sbjct: 118 IFYFFIANQLVPLLGLENLLREHSGDINLLQQFLFGSANLWENLTAGVLCIGMISAAYIG 177

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VRSGL A+P+GQ EAA  LGL+     R ++ PQ  + IIPPL  Q ++L+K+SS+  
Sbjct: 178 EVVRSGLDAIPKGQHEAAKTLGLSTWHRYRYIIAPQVFKVIIPPLAGQCISLVKDSSIIS 237

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +   +L  VG  I N +G   EI +     Y  L  +++   N    
Sbjct: 238 LISIQELTFVGTEIANSSGMIFEIWIFVALSYFVLCFILSQLFNYWER 285



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
               G  +T  L F GM+ A   G L+G GR S   ++  +   Y+++ RNIPPLV
Sbjct: 59  YFFDGLFSTLRLTFWGMLFAICFGVLLGLGRRSNFTVIRALSNSYIQLIRNIPPLV 114


>gi|254191286|ref|ZP_04897790.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938958|gb|EDO94628.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 87/218 (39%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + V S   G V ++    ++R    +        Y  T++  G P
Sbjct: 14  YWDGQRMSGLAVTLWLLVASLGAGFVCAVPL-AVARVSKNRWLSTPVRFY--TYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + L Y   +    + +  ++  +     F    +A +  T A+  EI    + A+ 
Sbjct: 71  LYVQLLLLYTGMYSLAFVREHAWLD-AFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIA 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R V+LP ++R  +P  +++ + +L  +++A      D++ V 
Sbjct: 130 HGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTATVPDILKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + T  A +   I   IYL++S  +     R    
Sbjct: 190 RDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    +    +   R+S N+ ++   R Y  VFR  P  V +  LY
Sbjct: 20  MSGLAVTLWLLVASLGAGFVCAVPLAVARVSKNRWLSTPVRFYTYVFRGTPLYVQLLLLY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
             + S+  + +H+ +  F     +  +    L             +  I 
Sbjct: 80  TGMYSLAFVREHAWLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIA 129


>gi|325964296|ref|YP_004242202.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470383|gb|ADX74068.1| amino acid ABC transporter membrane protein, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 263

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 19/263 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L V   ++   ++ L +      +   +F   +          T     +    LG ++ 
Sbjct: 13  LYVQAGIFVVAIAALILATDWEAIGNSVFNFAKIGPMFPGIFVTGLSNTLIYTFLGFIVG 72

Query: 202 LFATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           L    L    +       + +   YI  F       LV IA  Y +     V      I 
Sbjct: 73  LSGGLLLALMKLSSFPLYRWIATGYIEFFRGIPA-LLVFIAFGYGVPLAFGVSWNITVI- 130

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                     + ++L    +A+IAE +R+GL AVP+GQ+EAA +LG+   +A   +++PQ
Sbjct: 131 ----------VMVSLGMVASAYIAETLRAGLQAVPKGQLEAARSLGMPQWRAMVTIVIPQ 180

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIY 374
           A + ++PPLT++ + L K+SSL   +G      +L   G   I+  G  +  +L+    Y
Sbjct: 181 AFKIVLPPLTNEIILLTKDSSLIYVLGLTASQYELTKFGRDGISSLGAGLTPLLVAGAFY 240

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
           L ++I ++L   +  ++ A  ++
Sbjct: 241 LVITIPLSLLARKFESRSARTKR 263



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 32/79 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G  NT    F G I     G L+   +LS+  L  WI   Y+E FR IP L+V    
Sbjct: 54  FVTGLSNTLIYTFLGFIVGLSGGLLLALMKLSSFPLYRWIATGYIEFFRGIPALLVFIAF 113

Query: 149 YKSVLSVLPIPDHSIVLPF 167
              V     +  +  V+  
Sbjct: 114 GYGVPLAFGVSWNITVIVM 132


>gi|313632859|gb|EFR99809.1| amino acid ABC transporter, permease protein [Listeria seeligeri
           FSL N1-067]
          Length = 213

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           AK  +  F + +V S+    L    +  K      +L I  +++ G P L+ +   Y   
Sbjct: 15  AKTTLLVFAVTLVCSIPLGALVAIGNVSKITPLKFILNIYIWILRGTPLLLQLIFIY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P++          V     +++IA     AA+ AEI R G +++  GQ E+A  LGL
Sbjct: 72  YGLPII--------GIVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGL 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G   +++    I 
Sbjct: 124 TYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIP 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++L+   IYL+L+    +   +L  + +
Sbjct: 184 LVLVAA-IYLALTAXXXVLFKQLEKRFS 210



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G LV  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFAVTLVCSIPLGALVAIGNVSKITPLKFILNIYIWILRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGIVFDRMDAVFIAFILNY 95


>gi|110804698|ref|YP_688218.1| glutamate/aspartate transport system permease [Shigella flexneri 5
           str. 8401]
 gi|110614246|gb|ABF02913.1| glutamate/aspartate transport system permease [Shigella flexneri 5
           str. 8401]
          Length = 224

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 111/230 (48%), Gaps = 6/230 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GI+       +      +     P+ +
Sbjct: 1   MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM------RLSSFAPVSW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  AD +    TI  + G  +E+IL   F+Y  +S+  +L ++ L  + A
Sbjct: 175 LSLADFLPYRSTIGERDGTQVEMILFAGFVYFVISLSASLLVSYLKRRTA 224



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   V+W  + YV VFR+IP ++V+ +
Sbjct: 15  YLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVSWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|89901104|ref|YP_523575.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89345841|gb|ABD70044.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 367

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 108/261 (41%), Gaps = 21/261 (8%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL------SFPTLTMDTNAKIFVFSFV 195
           L+V   +     + LP+    ++  F   +    L      +     +     +   S V
Sbjct: 112 LLVASCVRMFWKTWLPLLWVVVLAAFFTLMYGNSLGLTQVDTDRWGGLPLTILLASLSLV 171

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   ++L    L R       ++   +Y+            LI++ +   F  P+     
Sbjct: 172 MSFPIALLV-ALGRRSSLPAIRSFCTIYVELIRGVP-----LISVLFMASFMFPLFMPQG 225

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F          + + + ++ + AA+ AE++R GL A+P+GQ+EAA  LGL++ +  R ++
Sbjct: 226 F-----KIDVLIRVLVGITLFAAAYSAEVIRGGLQAIPKGQVEAAATLGLSYWQTQRKIV 280

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILIWM 371
           LPQA+  ++P + + +++  K++SL   V   +L       +N         IE  +   
Sbjct: 281 LPQALAMVVPGIMNNFISTFKDTSLVTIVSLYELTGAMSLALNSDSNWRPFTIEGYIFIA 340

Query: 372 FIYLSLSIMIALFMNRLNAKI 392
            IY      ++ + + +  ++
Sbjct: 341 LIYFVFCFSMSRYSHWVEKQV 361



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  LA   ++ +  I  LV  GR S+   +   C +YVE+ R +P + V+F     
Sbjct: 158 GLPLTILLASLSLVMSFPIALLVALGRRSSLPAIRSFCTIYVELIRGVPLISVLFMASFM 217

Query: 152 VLSVLPIPDHSIVL 165
               +P      VL
Sbjct: 218 FPLFMPQGFKIDVL 231


>gi|23098014|ref|NP_691480.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776238|dbj|BAC12515.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 18/224 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M ++ + L    +T        +FS+++  +  L   RLS +   + G           +
Sbjct: 22  MDISEKLLQGIGVTFTILLASALFSYLMAFIAGL--CRLSDNVIIRKGTGF-----YVEV 74

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G   +V +   +  ++  P+L  FN +        +    IA+     A+++E+VRS 
Sbjct: 75  FRGTSLIVQL---FWFYYALPMLFGFNSLDN------WWIGVIAIGLNYGAYLSEVVRSS 125

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++AV +GQ EAA AL ++  +  RLV+ PQA+R ++P   +  + +LK +SL   +G  D
Sbjct: 126 ILAVSKGQSEAATALNMSRFQRMRLVIFPQAVRMMLPEFGNYTIQILKGTSLVSLIGLQD 185

Query: 349 LVSVGGTIINQTGQAI--EIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  G ++ N +   +   I  + +  Y  L++ +  F  +   
Sbjct: 186 ILYHGESLRNVSSMEMGGLIYFVALIFYFVLALPLIFFTRKAEK 229



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   TF +  +  + + ++  + G  RLS N ++      YVEVFR    +V +F+ 
Sbjct: 28  LLQGIGVTFTILLASALFSYLMAFIAGLCRLSDNVIIRKGTGFYVEVFRGTSLIVQLFWF 87

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y ++  +             +
Sbjct: 88  YYALPMLFGFNSLDNWWIGVI 108


>gi|255527438|ref|ZP_05394311.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296187467|ref|ZP_06855862.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
 gi|255508884|gb|EET85251.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|296047989|gb|EFG87428.1| ABC transporter, permease protein [Clostridium carboxidivorans P7]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 6/167 (3%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T  I G P L+ + L +   +  P    F  I       + +   I  +  + AFI+EI
Sbjct: 60  YTAFIRGTPALLQLFLVF---YGLPQALSFVGID-INDWSKSVFAIITFALNSGAFISEI 115

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RS  ++V  GQ EAA+++G+ + +  R +++PQA +  +P L +  ++LLK +S    +
Sbjct: 116 MRSAYLSVDAGQSEAALSIGMNNVQCLRRIIIPQAFKICLPNLGNIIISLLKETSYVFTI 175

Query: 345 GFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLN 389
           G  D++     I +     + +E  L    IY  +SI+I  F++   
Sbjct: 176 GVVDILGKAKLIGSDGYGVRQLEAFLAVALIYWVISIVIEQFISLYE 222


>gi|222106918|ref|YP_002547709.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221738097|gb|ACM38993.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 213

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 18/224 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL-- 228
           ++ +              I V S  +G ++++            +GK L  +    F+  
Sbjct: 1   MSFKLFFLLVKAAGWTLGISVISIAIGFLIAIAL-----SGAMLSGKRLYTMPTKLFISF 55

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G+P LV + L Y L           FIG     P  ++  I LS  TAA+ AE +R G
Sbjct: 56  FRGVPLLVQLLLIYNL---------LPFIG--INVPSVVAAIIGLSLCTAAYQAENLRGG 104

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
             +VP+G +EAA   G + R+    + LP A+R   P L ++ + +LK+SSL   VG  +
Sbjct: 105 FESVPKGLIEAADMAGFSGRQTFLRIKLPIALRLTFPALVNEAIMILKSSSLVSVVGIVE 164

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L  +   +   T   IE+      IYL +   +A+        +
Sbjct: 165 LTRMAQDLAASTYLPIELFSSAALIYLIICWSVAMIARITERSL 208


>gi|329766946|ref|ZP_08258474.1| hypothetical protein HMPREF0428_00171 [Gemella haemolysans M341]
 gi|328837671|gb|EGF87296.1| hypothetical protein HMPREF0428_00171 [Gemella haemolysans M341]
          Length = 214

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 19/213 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S  LG++++         F+ K       +YI  +++ G P L+ +   Y +
Sbjct: 21  VFFLVLILSIPLGVIIAFII-----RFNIKLLNYFINIYI--WIMRGTPLLLQLIFIYYV 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  IA +   AA+ AEI R G+ ++P+GQ EAA  L 
Sbjct: 74  -----------LPSVGIRFDRLPAAIIAFTLNYAAYFAEIFRGGIDSIPKGQYEAAKVLK 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R V+LPQ ++ ++P + ++ ++L+K++SL  A+G +DL+    T  N+    +
Sbjct: 123 FTQFQTIRFVILPQVIKIVLPSVFNEIMSLVKDTSLVYALGISDLILASRTAANRDASLL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +   IYL L  ++ +   R+  +     +
Sbjct: 183 PMF-VAGAIYLLLIGIVTIISKRVEKRYNYDRR 214



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  + F  +I +  +G ++        KL+ +   +Y+ + R  P L+ + F+
Sbjct: 11  LIKGALITLEVFFLVLILSIPLGVIIAFIIRFNIKLLNYFINIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV    D          LN 
Sbjct: 71  YYVLPSVGIRFDRLPAAIIAFTLNY 95


>gi|323262143|gb|EGA45705.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
          Length = 249

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQEAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGL 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M+ +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMSLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   +  GF  T  L+ +  I A ++G++ G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  V  +LP 
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVVPELLPE 94


>gi|157165564|ref|YP_001467259.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter concisus 13826]
 gi|112801999|gb|EAT99343.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter concisus 13826]
          Length = 236

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 102/245 (41%), Gaps = 17/245 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
            L  + I        +   L+         +      + +    +GI L        +  
Sbjct: 9   FLFFIIIVSLGTYFFYPRDLSEAQEIAYIKSYGVTLGLTIGGIAIGITLGFIL-AFIKFL 67

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             K    +   YI   ++ G P ++ + +             F+ +  +T S  F    I
Sbjct: 68  DIKVLNFVIDEYID--ILRGTPVILQLLI-------------FSVVIFATWSDNFYVAVI 112

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   ++A++AEIVRSG+ +V +GQMEAA A+GL +  + R ++ PQA ++I+P L +++
Sbjct: 113 ALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREIVFPQATKNILPALANEF 172

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L K +S+   +   D+     ++        E ++    +Y        L +  L  +
Sbjct: 173 ISLFKETSVVGYISVVDITMQSKSLQAVFYSP-EPVIFTGIVYYVSVKFFTLLVKLLERR 231

Query: 392 IALKE 396
           +   +
Sbjct: 232 LNRHD 236


>gi|17546978|ref|NP_520380.1| amino acid ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17429279|emb|CAD15966.1| probable amino acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 230

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 53/183 (28%), Positives = 99/183 (54%), Gaps = 8/183 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +      L + +T L++ +    L+ + +  +F  P L           + +F ++  AL
Sbjct: 50  RVSPFRLLRWPATALVYVVRGTPLLMVIFWAYFLLPTLTG-------QRTDQFNTMLTAL 102

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             + AA++AEIVR+G+ A+PRGQME+A +LGL + +A RLVLLPQA+R+++P L +Q ++
Sbjct: 103 VVFDAAYLAEIVRAGIQALPRGQMESARSLGLPYLQAMRLVLLPQALRNMLPSLVNQLVS 162

Query: 334 LLKNSSLAVAVGFADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +K +SL   +   ++  V G I  +   Q+ E+  +    Y ++   +      L  ++
Sbjct: 163 TIKETSLGYIISLPEVSFVAGQISTSVMTQSAEVYGLLALSYFAMCFGLTRVAFLLERRL 222

Query: 393 ALK 395
           A +
Sbjct: 223 AAR 225


>gi|134093510|ref|YP_001098585.1| glutamate/aspartate ABC transporter membrane protein [Herminiimonas
           arsenicoxydans]
 gi|133737413|emb|CAL60456.1| Glutamate/aspartate transport system permease protein gltK
           [Herminiimonas arsenicoxydans]
          Length = 228

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 107/227 (47%), Gaps = 11/227 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                LS    T+       +   + G +L+L     +R    K+   L   Y++     
Sbjct: 12  TWPYLLSGLKYTLQLTLTAAIGGVLFGTLLAL-----ARLSSFKSLAFLAAAYVNL---- 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQ-FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            + ++ L+ + +  +F  PV+ Q               S YI    + AA+  EI+R+G+
Sbjct: 63  -MRSIPLLLVIFWFYFLVPVVLQTITGSERPVQLGADRSAYITFIMFEAAYFCEIMRAGI 121

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ +GQ+ AA ALGL++ +A RLV+LPQA R+++P L +Q + L ++ SL   +   D 
Sbjct: 122 QSISKGQVNAAYALGLSYAQAMRLVVLPQAFRNMLPILLTQTIVLFQDVSLVSLLNVTDF 181

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           V     I  +  + +E+ L    +Y  LS  ++  + +L  +IA+  
Sbjct: 182 VGASVKIAQRDSRVVEMYLFVAIVYFVLSFALSSMVKQLQKRIAIIR 228



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 39/77 (50%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +   S     +L G   T  L  +  I   + GTL+   RLS+ K +A++   YV + 
Sbjct: 4   LDFDVISRTWPYLLSGLKYTLQLTLTAAIGGVLFGTLLALARLSSFKSLAFLAAAYVNLM 63

Query: 137 RNIPPLVVIFFLYKSVL 153
           R+IP L+VIF+ Y  V 
Sbjct: 64  RSIPLLLVIFWFYFLVP 80


>gi|221065075|ref|ZP_03541180.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220710098|gb|EED65466.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 223

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 17/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                     +N  L     ++       +     G +L+L      R   +K  +    
Sbjct: 6   DWSFFSLELFSNFVLKGLYFSVFLTVVATLGGIFFGTLLALM-----RLSGKKWLELPAT 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y++     G+ ++ L+ +        P+L                S  I    + AA+ 
Sbjct: 61  IYVN-----GMRSIPLVMVILWFFLLMPMLIGKPIGAE-------TSAIITFVAFEAAYF 108

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ ++PRGQ+ A  ALG+T+ +  RLV+LPQA R+++P L +Q + L +++SL 
Sbjct: 109 SEIMRAGIQSIPRGQVFAGQALGMTYGQNMRLVVLPQAFRNMLPVLLTQTIILFQDTSLV 168

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+G  D++          G+ IE  L     Y  +   ++ F+ RL+ KIA+  
Sbjct: 169 YAIGAYDMLKGFEIAGKNFGRPIESYLAAAVTYFVICFALSWFVKRLHKKIAIIR 223



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 2/155 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   + +L     +     GTL+   RLS  K +     +YV   R+IP ++VI + +
Sbjct: 20  LKGLYFSVFLTVVATLGGIFFGTLLALMRLSGKKWLELPATIYVNGMRSIPLVMVILWFF 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +  ++  P  +       F+      F  +       I       G  L +   +  R
Sbjct: 80  LLMPMLIGKPIGAETSAIITFVAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMR 139

Query: 210 H--FHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                +     LP+L   T ++F   +LV     Y
Sbjct: 140 LVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAY 174


>gi|53725287|ref|YP_102378.1| arginine/ornithine ABC transporter permease [Burkholderia mallei
           ATCC 23344]
 gi|67641785|ref|ZP_00440552.1| histidine transport system permease protein HisM [Burkholderia
           mallei GB8 horse 4]
 gi|121598902|ref|YP_993736.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|124383617|ref|YP_001028807.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126439876|ref|YP_001059755.1| histidine transport system permease protein [Burkholderia
           pseudomallei 668]
 gi|126449361|ref|YP_001081281.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|167001085|ref|ZP_02266886.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei PRL-20]
 gi|167825104|ref|ZP_02456575.1| histidine transport system permease protein [Burkholderia
           pseudomallei 9]
 gi|167911824|ref|ZP_02498915.1| histidine transport system permease protein [Burkholderia
           pseudomallei 112]
 gi|226199895|ref|ZP_03795445.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|254178560|ref|ZP_04885215.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|254199275|ref|ZP_04905641.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|254205585|ref|ZP_04911937.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|254296911|ref|ZP_04964364.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 406e]
 gi|254357748|ref|ZP_04974021.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|52428710|gb|AAU49303.1| arginine/ornithine ABC transporter, permease protein, putative
           [Burkholderia mallei ATCC 23344]
 gi|121227712|gb|ABM50230.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei SAVP1]
 gi|124291637|gb|ABN00906.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei NCTC 10229]
 gi|126219369|gb|ABN82875.1| histidine transport system permease protein [Burkholderia
           pseudomallei 668]
 gi|126242231|gb|ABO05324.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei NCTC 10247]
 gi|147748871|gb|EDK55945.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei FMH]
 gi|147753028|gb|EDK60093.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei JHU]
 gi|148026875|gb|EDK84896.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei 2002721280]
 gi|157807735|gb|EDO84905.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 406e]
 gi|160699599|gb|EDP89569.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei ATCC 10399]
 gi|225927951|gb|EEH23988.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia pseudomallei Pakistan 9]
 gi|238522771|gb|EEP86213.1| histidine transport system permease protein HisM [Burkholderia
           mallei GB8 horse 4]
 gi|243063039|gb|EES45225.1| putative arginine/ornithine ABC transporter, permease protein
           [Burkholderia mallei PRL-20]
          Length = 237

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 91/224 (40%), Gaps = 8/224 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            ++ + + +S   +T+          FV  + L++     SR                T+
Sbjct: 12  FLYWDGQRMSGLAVTLWLLVASLGAGFVCAVPLAVARVSKSRWLSTPV-------RFYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +    + +  ++  +     F    +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLLLYTGMYSLAFVREHAWL-DAFFRSGFHCAILAFALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A+  G++EAA A G++     R V+LP ++R  +P  +++ + +L  +++A      
Sbjct: 124 AIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ V     + T  A +   I   IYL++S  +     R    
Sbjct: 184 DILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    +    +   R+S ++ ++   R Y  VFR  P  V +  LY
Sbjct: 20  MSGLAVTLWLLVASLGAGFVCAVPLAVARVSKSRWLSTPVRFYTYVFRGTPLYVQLLLLY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
             + S+  + +H+ +  F     +  +    L             +  I 
Sbjct: 80  TGMYSLAFVREHAWLDAFFRSGFHCAILAFALNTCAYTTEIFAGAIRAIA 129


>gi|224368514|ref|YP_002602677.1| GlnP2 [Desulfobacterium autotrophicum HRM2]
 gi|223691230|gb|ACN14513.1| GlnP2 [Desulfobacterium autotrophicum HRM2]
          Length = 223

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 102/228 (44%), Gaps = 18/228 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             + + +    LS   +T++ +        + G++L +     +R +  K    +   Y+
Sbjct: 5   FNYAIEILPDMLSGAWVTIELSFVCITVGIIFGLILGV-----ARVYSSKFIYWIVTAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               + G P L+ +   Y    D  +L +             ++  +AL   T+ + AE 
Sbjct: 60  EF--LRGTPCLLQLFFIYYGLGDMGLLLK-----------PVLAAGLALGINTSVYQAEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  + ++  GQM AA A+GL   KA R ++LPQA+R +IP  +++ + + K +S+A AV
Sbjct: 107 FRGAIKSIKPGQMTAARAMGLGKWKAIRYIILPQALRLVIPSSSNEIIYMFKYTSVAFAV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +L+S          +  E  ++   +Y  +  ++A  M  +  K+
Sbjct: 167 GVPELLSQADLTGAMNFRYFESYVVAAILYTIMVFVVAKIMAMIEKKV 214



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+F  +    I G ++G  R+ ++K + WI   YVE  R  P L+ +FF+
Sbjct: 15  MLSGAWVTIELSFVCITVGIIFGLILGVARVYSSKFIYWIVTAYVEFLRGTPCLLQLFFI 74

Query: 149 YKSV 152
           Y  +
Sbjct: 75  YYGL 78


>gi|212711637|ref|ZP_03319765.1| hypothetical protein PROVALCAL_02712 [Providencia alcalifaciens DSM
           30120]
 gi|212685739|gb|EEB45267.1| hypothetical protein PROVALCAL_02712 [Providencia alcalifaciens DSM
           30120]
          Length = 262

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 4/246 (1%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL--SLFAT 205
           ++    S      H +   +  +     L    +++ T     +  F++       +   
Sbjct: 13  MFDKFFSGDFWSTHLLAPQYLEWFGYGFLLTVWISICTIIAATLLGFIVASARDSQIAPL 72

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R     +    +  PLL    F  F    ++  A    L  + P       +     S E
Sbjct: 73  RWFVSVYISIFRNTPLLVQLFFWYFASGEILPAAAMEWL--NTPHEVDIFGLTLGWPSFE 130

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++ ++ L+ YT  FIAE VRSG+  V +GQ +AA+ALGLT  ++ RLV+LPQA++  +P
Sbjct: 131 FLAGFVGLTLYTVPFIAEEVRSGIRGVRQGQKQAALALGLTSWQSMRLVILPQAVKIALP 190

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  QY+N++KNSSL +A+G A+L  V   + +Q+ Q      +   +Y+ +   +  + 
Sbjct: 191 PLLGQYMNVVKNSSLTMAIGVAELSYVSRQVDSQSLQTFAAFGLATVLYIVIIAFMEGWG 250

Query: 386 NRLNAK 391
                +
Sbjct: 251 QWRQQR 256



 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 67/175 (38%), Gaps = 6/175 (3%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F        +     Y      GF+ T W++   +I AT++G +V + R S    + W  
Sbjct: 17  FFSGDFWSTHLLAPQYLEWFGYGFLLTVWISICTIIAATLLGFIVASARDSQIAPLRWFV 76

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI----VLPFGMFLNNRGLSFPTLTMDT 185
            VY+ +FRN P LV +FF Y +   +LP                 L     SF  L    
Sbjct: 77  SVYISIFRNTPLLVQLFFWYFASGEILPAAAMEWLNTPHEVDIFGLTLGWPSFEFLAGFV 136

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              ++   F+   V S    R  R   ++   AL L    +  +  LP  V IAL
Sbjct: 137 GLTLYTVPFIAEEVRS--GIRGVRQGQKQAALALGLTSWQSMRLVILPQAVKIAL 189


>gi|52425742|ref|YP_088879.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307794|gb|AAU38294.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 223

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +    +FS ++G++ ++  +   R           ++     L    P L+ I   Y  
Sbjct: 27  LSFWAILFSVIIGVICAVVMSYRVRGLQT-------IVKAYIELSRNTPLLIQIFFLY-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F    I L+    +++AE VR+G+ +V +GQ+E+A+++G
Sbjct: 78  ---------FGLSKIGVKLEGFTCAVIGLAFLGGSYMAEAVRAGIESVSKGQVESALSIG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R V+ PQA     P + +  L L+K +S+  A+  A+L+ +   II    +  
Sbjct: 129 LTPMQTFRYVVFPQAFAVATPAIGANCLFLMKETSVVSAIAIAELMFMAKEIIGMDYKTN 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E + + +  YL + + +++F+  L  ++  
Sbjct: 189 EALFLLVVFYLIILLPVSVFIGYLERRLRR 218



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F  ++ + IIG +         + +  I + Y+E+ RN P L+ IFFL
Sbjct: 17  FVDATILTLELSFWAILFSVIIGVICAVVMSYRVRGLQTIVKAYIELSRNTPLLIQIFFL 76

Query: 149 YKSV 152
           Y  +
Sbjct: 77  YFGL 80


>gi|270262831|ref|ZP_06191102.1| transporter [Serratia odorifera 4Rx13]
 gi|270043515|gb|EFA16608.1| transporter [Serratia odorifera 4Rx13]
          Length = 228

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 2/179 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           L    T LI G+P LVL+ L +  L      L +        + P   +  I L     A
Sbjct: 48  LFGAYTTLIRGVPDLVLMLLIFYGLQIALNNLTELLGFSQIDIDP-LSAGIITLGFIYGA 106

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  E  R   +AVP+GQ+EAA A G +  +  R +L P  MR  +P + + +  +LK ++
Sbjct: 107 YFTETFRGAYMAVPKGQIEAATAYGFSGSQIFRRILFPAMMRFALPGIGNNWQVILKATA 166

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L   +G  D+V         T Q     ++   +YL  + +    +  L  + +L  K+
Sbjct: 167 LVSILGLNDVVKATQLAGKGTYQPFFFAIVAGVVYLIFTTVSNGVLLWLERRYSLGVKR 225


>gi|240122516|ref|ZP_04735472.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID332]
 gi|268681105|ref|ZP_06147967.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID332]
 gi|268621389|gb|EEZ53789.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID332]
          Length = 219

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++AVP+GQ+ A  A+GL+  +  R V LPQ     +P + +  L L+K +S+  
Sbjct: 103 EAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSVVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            VG A+L+ V   +I    +  E + +    YL + + ++L   RL  +I 
Sbjct: 163 TVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRLENRIR 213



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|213967000|ref|ZP_03395150.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301385184|ref|ZP_07233602.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302062752|ref|ZP_07254293.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302130125|ref|ZP_07256115.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213928322|gb|EEB61867.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331014303|gb|EGH94359.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 220

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    + V G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWTAREVLWAGFLTSIQCSALAIVAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL      + +  P L              F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVL-----AVFYMVPAL--------GWHISAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+PRGQ+EA  A+GL   +  R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L    +  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRHIEKRVAL 219



 Score = 36.8 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-- 140
            +    +  GF+ +   +   ++  T+IG L G              R+YV++ R  P  
Sbjct: 12  WTAREVLWAGFLTSIQCSALAIVAGTLIGMLAGLVLTYGGFFARLPIRLYVDLIRGTPVF 71

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            LV+  F     L        +  +   +F
Sbjct: 72  VLVLAVFYMVPALGWHISAFQAGAIGLTLF 101


>gi|145589171|ref|YP_001155768.1| polar amino acid ABC transporter, inner membrane subunit
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047577|gb|ABP34204.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 222

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 13/235 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            + L    +      S+    +  + ++ V + V GIV   F   L R   + +      
Sbjct: 1   MLSLDLSFYNWELFTSYILKGLLFSVQLTVIATVGGIVFGTFL-ALMRLSGKPSMVYPAT 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y++T        LV++ L + L     +                +S  I    +  AF 
Sbjct: 60  IYVNTMRSIP---LVMVILWFFLLIPMLIGRPIGAD---------LSATITFIAFEGAFF 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR+G+ +VPRGQ  AA ALG+T+ +  R V+LPQA R++IP   +Q + L +++SL 
Sbjct: 108 SEIVRAGIQSVPRGQGYAAEALGMTYGQNMRFVVLPQAFRNMIPVFMTQTIILFQDTSLV 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+G  DL+          G+ IE  ++  F Y  +   ++  + R+ AK+A+  
Sbjct: 168 YAIGAYDLLKGFEIAGKNYGRPIETYILAAFTYFIICFSLSKIVRRVQAKVAIIR 222



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 9/205 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP--L 142
           + + IL G + +  L     +   + GT +   RLS    + +   +YV   R+IP   +
Sbjct: 14  FTSYILKGLLFSVQLTVIATVGGIVFGTFLALMRLSGKPSMVYPATIYVNTMRSIPLVMV 73

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++ FFL   +L   PI          +       S        +           + ++ 
Sbjct: 74  ILWFFLLIPMLIGRPIGADLSATITFIAFEGAFFSEIVRAGIQSVPRGQGYAAEALGMTY 133

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                     +     +P+    T ++F   +LV     Y L      L  F   G +  
Sbjct: 134 GQNMRFVVLPQAFRNMIPVFMTQTIILFQDTSLVYAIGAYDL------LKGFEIAGKNYG 187

Query: 263 SPEFMSLYIALSCYTAAF-IAEIVR 286
            P    +  A + +   F +++IVR
Sbjct: 188 RPIETYILAAFTYFIICFSLSKIVR 212


>gi|86360916|ref|YP_472803.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86285018|gb|ABC94076.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 219

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 97/227 (42%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M + +  L+          ++ V    L +V++  A  L R       +AL   YI  F 
Sbjct: 1   MSVWSGYLTLILQGALVTLELTVIGSALALVMAFLAG-LGRLSRFFAVRALATAYIEFF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   + ++F  P         G T++P   +  +AL     A+ AE+VR  
Sbjct: 59  -RGTSIFVQL---FWVYFVLP-------FAGLTLTP-LQAGVLALGLNVGAYGAEVVRGA 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV R Q EA IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D
Sbjct: 107 VKAVGREQSEACIALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +      +  QTG  +      + +Y  ++  I+  M  L  ++   
Sbjct: 167 MTFQAQVVRAQTGNTLVPFAAILILYFLMASAISAAMRLLERRMTRG 213



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 3/142 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL G + T  L   G   A ++  L G GRLS    V  +   Y+E FR     V 
Sbjct: 7   YLTLILQGALVTLELTVIGSALALVMAFLAGLGRLSRFFAVRALATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F++Y  +                + LN        +     A     S      ++L  
Sbjct: 67  LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC---IALNL 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
           +R  R  H    +ALPL+  + 
Sbjct: 124 SRYQRMRHVILPQALPLMLPTF 145


>gi|330468470|ref|YP_004406213.1| polar amino acid ABC transporter inner membrane subunit
           [Verrucosispora maris AB-18-032]
 gi|328811441|gb|AEB45613.1| polar amino acid abc transporter, inner membrane subunit
           [Verrucosispora maris AB-18-032]
          Length = 260

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 101/246 (41%), Gaps = 16/246 (6%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           + P+            +        T+ +     + V + +LG  L +    ++     +
Sbjct: 1   MDPLRTLWETFFDWESMREALPEMITVGLPNTLILAVTAALLGSALGIVL-AVAGISRTR 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             +    +Y   F        +L+           +      + G    P      +ALS
Sbjct: 60  WLRWPARVYTDVFRGLPAAATILLI-------GVGLAPLGMQVWGPNPYPL---GILALS 109

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              +A+I EI RSG+ +V   Q+EAA ALG +  +A R V++PQ +R I+P   +Q + L
Sbjct: 110 LIASAYIGEIFRSGIQSVEATQLEAARALGFSWGEAMRRVIIPQGIRRILPAWVNQLIAL 169

Query: 335 LKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +K+SSL   +G      +L  +G      TG     +L+    YL+L++ +   +N ++ 
Sbjct: 170 IKDSSLVYFLGLLASQRELFRIGQDYAANTGNQ-SALLLAGLFYLALTVPLTHVVNWIDR 228

Query: 391 KIALKE 396
           ++    
Sbjct: 229 RLRHGR 234



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 1/191 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I VG  NT  LA +  +  + +G ++    +S  + + W  RVY +VFR +P    I  +
Sbjct: 25  ITVGLPNTLILAVTAALLGSALGIVLAVAGISRTRWLRWPARVYTDVFRGLPAAATILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
              +  +          P G+   +   S     +  +    V +  L    +L  +   
Sbjct: 85  GVGLAPLGMQVWGPNPYPLGILALSLIASAYIGEIFRSGIQSVEATQLEAARALGFSWGE 144

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                   + +  + +  ++   +  +   +L Y L         F        +    S
Sbjct: 145 AMRRVIIPQGIRRI-LPAWVNQLIALIKDSSLVYFLGLLASQRELFRIGQDYAANTGNQS 203

Query: 269 LYIALSCYTAA 279
             +    +  A
Sbjct: 204 ALLLAGLFYLA 214


>gi|289678215|ref|ZP_06499105.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 154

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 3/146 (2%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+       + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+
Sbjct: 9   FMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVI 68

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMF 372
           LPQA++ +IP + + ++ L K++SL + +G  DL++            G A E  +    
Sbjct: 69  LPQALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATADPAWLGMATEGYVFAAL 128

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   L  K+    K+
Sbjct: 129 VFWIFCFGMSRYSMHLERKLDTGHKR 154


>gi|254455291|ref|ZP_05068720.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082293|gb|EDZ59719.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 228

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 91/228 (39%), Gaps = 6/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N        + +         + +L   +      +        G+  P+  ++ F   
Sbjct: 1   MNAEWRWDFAIEILPQMLWATLNTILAAGVGYAIAAIVGLLFL-LGQRTPIKIVNMFNRE 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  +    L  QL F   VL QF           ++   I +  +   +++E+ R  L 
Sbjct: 60  IVEFIRSTPLLIQLFFVYFVLPQFG-----ITLSAWVCGMITIGLHFGTYLSEVYRGALE 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP+ Q EA  AL  +     R ++LPQA    IP + +  + + K++ L   +G A+L 
Sbjct: 115 GVPKTQWEACRALNFSTFYTYRKIVLPQAFPIAIPGMGNYLVGIFKDTPLLSTIGVAELF 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                +     + +E   I   I+L+LSI  A+++ +L   + L + K
Sbjct: 175 HAATAVGGYNYRYLEPYTIVGIIFLTLSIPAAMWIRKLEKNVNLAQGK 222



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           +NT   A  G   A I+G L   G+ +  K+V    R  VE  R+ P L+ +FF+Y  + 
Sbjct: 22  LNTILAAGVGYAIAAIVGLLFLLGQRTPIKIVNMFNREIVEFIRSTPLLIQLFFVYFVLP 81

Query: 154 SVLPIPDHS 162
                    
Sbjct: 82  QFGITLSAW 90


>gi|152979605|ref|YP_001345234.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
 gi|150841328|gb|ABR75299.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 219

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 100/232 (43%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +      R +    LT+  +    + S ++G++ ++      R           ++
Sbjct: 1   MNWQYIGDAVPRFIDATLLTLHLSLWSIILSIIVGMLCAVALVHKIRGLQW-------MV 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y           F           F    I L+    +++A
Sbjct: 54  KAYIELSRNTPLLIQVFFLY-----------FGLSKIGIRLDGFTCGIIGLAFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+GL AV +GQ+E+A++LGLT ++A R V+ PQA     P + +  L L+K +S+  
Sbjct: 103 EAFRAGLEAVSKGQIESALSLGLTPQQAFRYVIFPQAFAISTPAIGANCLFLMKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+  A+L+ +   II    +  E + + +  YL + + +++++  L  ++  
Sbjct: 163 AIAVAELMFLAKDIIGMDYKTNEALFLLVIFYLIILLPVSVYIRYLERRLRR 214



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+   +I + I+G L     +   + + W+ + Y+E+ RN P L+ +FFL
Sbjct: 13  FIDATLLTLHLSLWSIILSIIVGMLCAVALVHKIRGLQWMVKAYIELSRNTPLLIQVFFL 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YFGLSKIGIR 82


>gi|309390079|gb|ADO77959.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 214

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S   G +L      L + +  K    L  ++IS  +I G P LV + + Y  
Sbjct: 18  VTVFVTIISCFSGTILGSLL-ALGKIYGNKVISTLVRIFIS--IIRGTPLLVQLFIIYY- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                  +  I+    +  + AE +R  + ++   Q++AA ++G
Sbjct: 74  ----------GLPSYGIRLAPLTAAVISFIINSGVYQAEYLRGSIQSISGSQLKAAQSIG 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++LPQA+R +IP  T++++ ++K SSLA  +G  +L++    + ++  Q  
Sbjct: 124 MTKWQGIRYIILPQALRRVIPAWTNEFIYMIKYSSLAYVIGAKELMTEAKLLASRNYQFF 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  +   IYL++ +      NRL  K+ +
Sbjct: 184 NVYFLVALIYLAVIMFFVYLFNRLEKKVTI 213


>gi|187924720|ref|YP_001896362.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187715914|gb|ACD17138.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 218

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 14/197 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           +I   SFVL  VL L    L R    +        +I+  +I GLP 
Sbjct: 9   FLPILLKGAVVTIEITFCSFVLSTVLGLLL-ALMRVSDNRVVSNAAATFIN--VIRGLPI 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   + ++F  P L              F + +I L    + + AE  R+G+ A+  
Sbjct: 66  IVQL---FYIYFVLPDL--------GVQLSAFQAGFIGLGIAYSVYQAENFRAGIQAIDH 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA ++G+      R V+LPQA R  +PP  +  + +LK+SSLA  +  A++   G 
Sbjct: 115 GQIEAAQSIGMRGAMIMRRVVLPQAFRIALPPYGNTLVMMLKDSSLASTITVAEMTRAGQ 174

Query: 355 TIINQTGQAIEIILIWM 371
            I + T Q + +  +  
Sbjct: 175 LIASSTFQNMTVFTLVA 191



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 45/110 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +   +   +L G V T  + F   + +T++G L+   R+S N++V+     ++ V R 
Sbjct: 3   FQNAVEFLPILLKGAVVTIEITFCSFVLSTVLGLLLALMRVSDNRVVSNAAATFINVIRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +P +V +F++Y  +  +            G+ +               A 
Sbjct: 63  LPIIVQLFYIYFVLPDLGVQLSAFQAGFIGLGIAYSVYQAENFRAGIQAI 112


>gi|28378896|ref|NP_785788.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254557101|ref|YP_003063518.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300769711|ref|ZP_07079594.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308181097|ref|YP_003925225.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28271733|emb|CAD64639.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum WCFS1]
 gi|254046028|gb|ACT62821.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum JDM1]
 gi|300492754|gb|EFK27939.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046588|gb|ADN99131.1| glutamine ABC transporter, permease protein [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 213

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S  LG+V+ L      +           LL+   +L+ G P L
Sbjct: 12  LSGAVMTLKIFIWTLIGSLPLGLVVGLGLMSNFKPLQW-------LLHFYVWLMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V P + +   A     AA+ AEI R GL ++  G
Sbjct: 65  LQLIFVF---YGLPLI--------GIVFPRYYAALFAFILNYAAYFAEIFRGGLQSIDNG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  L L++ +  R +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 114 QYESARVLRLSYWQTIRKIVIPQVIKIVLPSVGNEVINLVKDSSLVYVIGLGDLLRAGNV 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +    +  +++   IYL+L+ +    + R+    +
Sbjct: 174 ATARD-VTLVPLVLVGIIYLALTAVTTFVLGRIEKHYS 210



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    +I +  +G +VG G +S  K + W+   YV + R  P L+ + F+
Sbjct: 11  LLSGAVMTLKIFIWTLIGSLPLGLVVGLGLMSNFKPLQWLLHFYVWLMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  +        F   LN              + 
Sbjct: 71  FYGLPLIGIVFPRYYAALFAFILNYAAYFAEIFRGGLQSI 110


>gi|328543626|ref|YP_004303735.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
 gi|326413370|gb|ADZ70433.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
          Length = 385

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 111/266 (41%), Gaps = 18/266 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P V        +  V        +L   +      L     ++     + +   V GIV 
Sbjct: 130 PSVPFKRTNAVLFLVAFPVVAYFLLTGLIVNGRVILPIVETSVWGGLLVTLVIAVTGIVA 189

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           SL       L R       + + +++I  +    L T VL      L    P    FN  
Sbjct: 190 SLPLGVLLALGRRSQMPVVRLVSVIFIEFWRGVPLIT-VLFMSSVMLPLFLPEGVTFN-- 246

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL + +   L++LP
Sbjct: 247 -------KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRYWQMMGLIILP 299

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-----IINQTGQAIEIILIWMF 372
           QA++ +IP + + ++ L K+++L + VG  DL+    +       +   Q     L    
Sbjct: 300 QALKLVIPGIVNTFIGLFKDTTLVLIVGMFDLLGQIQSSFSDPTWSSPTQGHTGYLFAGM 359

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   +  ++    K+
Sbjct: 360 VFWIFCFGMSRYSIFMEKRLNTGHKR 385


>gi|72160708|ref|YP_288365.1| amino acid ABC transporter inner membrane subunit [Thermobifida
           fusca YX]
 gi|71914440|gb|AAZ54342.1| amino acid ABC transporter, inner membrane subunit [Thermobifida
           fusca YX]
          Length = 240

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 94/221 (42%), Gaps = 13/221 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L        T   I +   VL   L++    +         +A+   Y  TF   G+  
Sbjct: 7   RLPLYLSGAGTTLLITLLGAVLAFALAMVVGVMG-TLRNPVARAIATGYTETF--RGVAA 63

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVL+   Y + F  P L  +             +  +AL     A+ AE+VR+ + AVP+
Sbjct: 64  LVLM---YWMAFAIPQLVPYKI-------DALFAAVLALGLNVGAYGAEVVRAAINAVPK 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+EA IAL ++  +  R V+LPQA   ++P   +  + L+K +++   +G +DL  V  
Sbjct: 114 AQVEATIALSMSWWRRMRAVVLPQAWAQMLPTFGNLVIELMKATAIVSLIGVSDLTRVAQ 173

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                TG+ +      +  Y  ++ ++ + M  L  +   +
Sbjct: 174 EQRASTGETVAAFTGALIAYFLIAQLLIVGMRLLERRANRR 214



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  +   G + A  +  +VG      N +   I   Y E FR +  LV+++++
Sbjct: 11  YLSGAGTTLLITLLGAVLAFALAMVVGVMGTLRNPVARAIATGYTETFRGVAALVLMYWM 70

Query: 149 YKSVLSVLP 157
             ++  ++P
Sbjct: 71  AFAIPQLVP 79


>gi|306843690|ref|ZP_07476290.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306276000|gb|EFM57709.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
          Length = 385

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   +S    V     ++  +   + PL++     K + ++L   
Sbjct: 92  ACWAFVNAKYEQFLYGRYPISERWRVDLTALIFAAL---LVPLLIPKVPKKGLNAILFFL 148

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +V  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 149 VFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L +++I       L T++ +A      F  P               + +   I ++ +
Sbjct: 209 KTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +             ++   F++      ++ +   +  +
Sbjct: 319 DTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 378

Query: 392 IALKEKK 398
           +    K+
Sbjct: 379 LDTGHKR 385



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|257142742|ref|ZP_05591004.1| histidine transport system permease protein [Burkholderia
           thailandensis E264]
          Length = 237

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 4/225 (1%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYIST 226
           G +  N   S           +++    +G+   L     ++R    +       LY  T
Sbjct: 6   GQYWQNYLFSDGYRISGLAITLWLLVVSIGLGFGLAVPLAVARASRNRAVSGAVWLY--T 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++  G P  V + L Y   +   V+    ++  S          +A +    A+  EI  
Sbjct: 64  YVFRGTPLYVQLLLCYTGIYSLSVVHDHAWL-DSFFRSAMNCTLLAFTLNECAYATEIFA 122

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA     
Sbjct: 123 GAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHETTLAFTATV 182

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 183 PDILKVTRDVNSATYASFQAYGIAAALYALIVFALIWVFRRMEAR 227



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    + G   T WL    +     +   +   R S N+ V+    +
Sbjct: 5   IGQYWQNYLFSDGYR---ISGLAITLWLLVVSIGLGFGLAVPLAVARASRNRAVSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|167572785|ref|ZP_02365659.1| histidine transport system permease protein [Burkholderia
           oklahomensis C6786]
          Length = 237

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 90/229 (39%), Gaps = 8/229 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                 +F +   LS   +T+          F L + L++     +R             
Sbjct: 7   QYWQNYLFSDGYRLSGLAITLWLLVVSIGLGFCLAVPLAIARASRNRLLSRAV------- 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++ T++  G P  V + L Y   +   V+    ++  S          +A +    A+  
Sbjct: 60  WLYTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLD-SFFRSAMNCTLLAFTLNECAYAT 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI    + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA 
Sbjct: 119 EIFAGAIKSTSPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAF 178

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 179 TATVPDILKVTRDVNSATYASFQAYGIAAVLYAVVVFGLIWLFRRMEAR 227



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 43/124 (34%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    L G   T WL    +     +   +   R S N+L++    +
Sbjct: 5   IGQYWQNYLFSDGYR---LSGLAITLWLLVVSIGLGFCLAVPLAIARASRNRLLSRAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|187732192|ref|YP_001881130.1| histidine ABC transporter permease HisQ [Shigella boydii CDC
           3083-94]
 gi|187429184|gb|ACD08458.1| histidine ABC transporter, permease protein HisQ [Shigella boydii
           CDC 3083-94]
          Length = 228

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +  + +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSELIFEGY--TTLIRGVPDLVLMLLIFFG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSELIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFFGL 72


>gi|294670249|ref|ZP_06735142.1| glutamine/glutamate ABC transporter, permease protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
 gi|291307986|gb|EFE49229.1| glutamine/glutamate ABC transporter, permease protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
          Length = 251

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 16/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYIS 225
           + +N   L+         AK+ +   V GI LSL       +   +  +    L   YI 
Sbjct: 31  LTMNWSYLAAAIPKFAEAAKLTLELSVYGIALSLAVGLPVAVVTAYRIRPFYFLARGYIE 90

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L    P L+ +   Y                       F    IAL+   A+++AE +
Sbjct: 91  --LSRNTPLLIQLFFLYY-----------GLPKIGIKWDGFTCSIIALTFLGASYMAEAL 137

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G++AVP+GQ+EA  A+GL   +  R V LPQA    +P + +  L L+K +S+  AVG
Sbjct: 138 RAGILAVPKGQIEAGKAIGLNRFQIFRYVELPQAWAVAVPAIGANILFLMKETSVVSAVG 197

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A+L+ V   II    +  E + +    YL + + ++L       ++ 
Sbjct: 198 IAELLFVTKDIIGMDYKTNEALFLLFASYLIILLPVSLSARWAEKRVR 245



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G+  +  +G  V        +   ++ R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 52  TLELSVYGIALSLAVGLPVAVVTAYRIRPFYFLARGYIELSRNTPLLIQLFFLYYGLPKI 111

Query: 156 LPI 158
              
Sbjct: 112 GIK 114


>gi|254455264|ref|ZP_05068693.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082266|gb|EDZ59692.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
          Length = 230

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 4/212 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V + ++G V +L  T L +    K+   +   Y  T +I G+P L++I L +  
Sbjct: 21  MTIAVSVSAMLVGFVFALIFTPL-KLSKYKSLNLIGNFY--TTVIRGVPELLVIYLFFFG 77

Query: 245 HFDKPVLGQFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                +     F     +    F++  +A+   + A+  E+ R  + ++ +GQ EAA  L
Sbjct: 78  GSGAIMYVASIFGYYEYIEINAFITGSLAIGIISGAYSTEVFRGAIQSIDKGQFEAAKVL 137

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++       ++LPQ +R  IP L++ +   LK++SL    G  +++         T   
Sbjct: 138 GVSKFAQFYKIILPQMLRLAIPNLSNVWQITLKDTSLISVTGLVEIMRQSYIAAGSTRDP 197

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +        +YLSL+ +    +N+L  K +  
Sbjct: 198 LFFYSFAAVLYLSLTYLSMKLINKLEVKYSRG 229


>gi|190892106|ref|YP_001978648.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190697385|gb|ACE91470.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 268

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 17/213 (7%)

Query: 192 FSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
               +G +++L         RL+   +    + LP L     + +G+  L+   L+   +
Sbjct: 66  IGLAIGFLVALGQQSEEKPLRLASGIYTTIFRGLPELLTLFIIYYGMQMLIQSLLELAGY 125

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P+               F++  IALS   +A+ +E++ S   A+P+GQ EA  +LGL
Sbjct: 126 VGPPIEIN-----------AFLAGVIALSVVFSAYCSEVLLSAFRAIPKGQYEAGDSLGL 174

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RL++LPQ +R  +P LT+ ++ LLK++S    +  AD++      +  T +   
Sbjct: 175 HRGRTLRLIILPQLVRIALPGLTNLWMVLLKDTSYVSIISLADILRQTSVAVRVTKEPFF 234

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I   +YL L+I+ +  +  ++      E +
Sbjct: 235 FYGIACCLYLVLAILSSFLLVHIDRWAKRSEVR 267



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 62/169 (36%), Gaps = 7/169 (4%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
             Q  +    D+ +   I +G   T  +A   +     IG LV  G+ S  K +     +
Sbjct: 32  FAQSTILACGDTGWGDEIALGLQVTVSVAIVTLPIGLAIGFLVALGQQSEEKPLRLASGI 91

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR +P L+ +F +Y  +  ++        L          +          A   V
Sbjct: 92  YTTIFRGLPELLTLFIIYYGMQMLI------QSLLELAGYVGPPIEINAFLAGVIALSVV 145

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           FS     VL L A R       + G +L L    T  +  LP LV IAL
Sbjct: 146 FSAYCSEVL-LSAFRAIPKGQYEAGDSLGLHRGRTLRLIILPQLVRIAL 193


>gi|126731933|ref|ZP_01747736.1| ABC transporter, membrane spanning protein (amino acid) [Sagittula
           stellata E-37]
 gi|126707465|gb|EBA06528.1| ABC transporter, membrane spanning protein (amino acid) [Sagittula
           stellata E-37]
          Length = 461

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 55/301 (18%), Positives = 120/301 (39%), Gaps = 20/301 (6%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
            G I A     LV A    A   ++   ++        P L++          +  +   
Sbjct: 176 LGHIFAGAWFPLVLAAVFFAAWWLSDAGKLGDVGSAFAPALLIAAGGLALWGGLPLVTMV 235

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             +      +        T+T+       V S  +G++L+L      R  +    K   +
Sbjct: 236 IDLALGTEVVETNKWGGLTITLVVAIFGIVISLPVGMLLAL-----GRRSNAPIIKYSSV 290

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           ++I       L +++  A     +F +P               + +   I +  + +A++
Sbjct: 291 IFIEVVRGIPLISVLFFASAMLPYFLEP----------GVDFNKLLRAMIGVVLFASAYM 340

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++R GL A+P+GQ E  ++LGL+  +  RL+++PQA+ ++IP + + ++ L K+++L 
Sbjct: 341 AEVIRGGLQAIPKGQYEGGMSLGLSFWQQMRLIIMPQALTTVIPGIVNTFIGLFKDTTLV 400

Query: 342 VAVGFADLVSVGGTII-----NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +   DL+ +    +     +    A    L    IY      ++ +   +  K+    
Sbjct: 401 LIISIFDLLGILNNTLKDPEWSTPTTAYTGYLTIALIYWIFCFGMSRYSVHMERKLDRSH 460

Query: 397 K 397
           +
Sbjct: 461 R 461



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 6/160 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T  +A  G++ +  +G L+  GR S   ++ +   +++EV R IP L+ + F  
Sbjct: 250 WGGLTITLVVAIFGIVISLPVGMLLALGRRSNAPIIKYSSVIFIEVVRGIP-LISVLFFA 308

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLFATR 206
            ++L     P           +     +   +       +       +  G+ L L   +
Sbjct: 309 SAMLPYFLEPGVDFNKLLRAMIGVVLFASAYMAEVIRGGLQAIPKGQYEGGMSLGLSFWQ 368

Query: 207 LSRHFHEK--TGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             R           +P +  +   +F   TLVLI   + L
Sbjct: 369 QMRLIIMPQALTTVIPGIVNTFIGLFKDTTLVLIISIFDL 408


>gi|116334342|ref|YP_795869.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099689|gb|ABJ64838.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 218

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 9/171 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F+I  +  L LI + +  +F  P L                +  +A++ + +  +AE
Sbjct: 56  IVGFIIDVIRNLPLILILFFTYFGLPNL--------GVKPDVIPAAILAMTIFESTMLAE 107

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG+ AV  GQME A A GLT+ +A   ++LPQA+  +IP L SQ+++L+K++SLA  
Sbjct: 108 IVRSGIQAVDPGQMEGARANGLTYWQALWYIVLPQALVKMIPALVSQFISLVKDTSLATI 167

Query: 344 VGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +   +++     I  Q T   I + +    +Y  +  ++++    L  + A
Sbjct: 168 ILLPEMLFRSQIIYGQNTNYIIPMFVAIAVMYFIVCYLLSVLARYLEKRQA 218


>gi|53716814|ref|YP_105872.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|53722005|ref|YP_110990.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|67639786|ref|ZP_00438620.1| histidine transport system permease protein HisM [Burkholderia
           mallei GB8 horse 4]
 gi|121596555|ref|YP_989820.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124382188|ref|YP_001024298.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126444820|ref|YP_001062438.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           pseudomallei 668]
 gi|126447121|ref|YP_001078282.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia mallei
           NCTC 10247]
 gi|126457790|ref|YP_001075391.1| His/Glu/Gln/Arg/opine ABC transporter permease [Burkholderia
           pseudomallei 1106a]
 gi|134279032|ref|ZP_01765745.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 305]
 gi|167002835|ref|ZP_02268625.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei PRL-20]
 gi|167723385|ref|ZP_02406621.1| histidine transport system permease protein [Burkholderia
           pseudomallei DM98]
 gi|167742356|ref|ZP_02415130.1| histidine transport system permease protein [Burkholderia
           pseudomallei 14]
 gi|167819527|ref|ZP_02451207.1| histidine transport system permease protein [Burkholderia
           pseudomallei 91]
 gi|167827900|ref|ZP_02459371.1| histidine transport system permease protein [Burkholderia
           pseudomallei 9]
 gi|167849367|ref|ZP_02474875.1| histidine transport system permease protein [Burkholderia
           pseudomallei B7210]
 gi|167906310|ref|ZP_02493515.1| histidine transport system permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|226197677|ref|ZP_03793252.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pakistan 9]
 gi|237508153|ref|ZP_04520868.1| histidine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242313957|ref|ZP_04812974.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106b]
 gi|254174148|ref|ZP_04880810.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|254183462|ref|ZP_04890054.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1655]
 gi|254190090|ref|ZP_04896599.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pasteur 52237]
 gi|254193255|ref|ZP_04899690.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei S13]
 gi|254200692|ref|ZP_04907057.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei FMH]
 gi|254204667|ref|ZP_04911020.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei JHU]
 gi|254263806|ref|ZP_04954671.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1710a]
 gi|254300363|ref|ZP_04967809.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 406e]
 gi|254356909|ref|ZP_04973184.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei 2002721280]
 gi|52212419|emb|CAH38444.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|52422784|gb|AAU46354.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|121224353|gb|ABM47884.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124290208|gb|ABM99477.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126224311|gb|ABN87816.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 668]
 gi|126231558|gb|ABN94971.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106a]
 gi|126239975|gb|ABO03087.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei NCTC 10247]
 gi|134249451|gb|EBA49532.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 305]
 gi|147748304|gb|EDK55379.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei FMH]
 gi|147754253|gb|EDK61317.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei JHU]
 gi|148025936|gb|EDK84059.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei 2002721280]
 gi|157810289|gb|EDO87459.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 406e]
 gi|157937767|gb|EDO93437.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pasteur 52237]
 gi|160695194|gb|EDP85164.1| histidine ABC transporter, permease protein [Burkholderia mallei
           ATCC 10399]
 gi|169650009|gb|EDS82702.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei S13]
 gi|184213995|gb|EDU11038.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1655]
 gi|225930286|gb|EEH26298.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei Pakistan 9]
 gi|235000358|gb|EEP49782.1| histidine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|238520390|gb|EEP83850.1| histidine transport system permease protein HisM [Burkholderia
           mallei GB8 horse 4]
 gi|242137196|gb|EES23599.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1106b]
 gi|243061530|gb|EES43716.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia mallei PRL-20]
 gi|254214808|gb|EET04193.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia pseudomallei 1710a]
          Length = 237

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 4/225 (1%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYIST 226
           G +  N   S           +++    LG+   L     ++R    +       LY  T
Sbjct: 6   GQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWLY--T 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++  G P  V + L Y   +   V+    ++  S          +A +    A+  EI  
Sbjct: 64  YVFRGTPLYVQLLLCYTGIYSLSVVHDHAWL-DSFFRSAMNCTLLAFTLNECAYATEIFA 122

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA     
Sbjct: 123 GAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTATV 182

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 183 PDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEAR 227



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 67/218 (30%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    L G   T WL    +     +   +   R S N+ V+    +
Sbjct: 5   IGQYWQNYLFSDGYR---LSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  +         L+L A        
Sbjct: 122 AGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA + Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIW 219


>gi|22127992|ref|NP_671415.1| ABC transporter permease [Yersinia pestis KIM 10]
 gi|45443740|ref|NP_995279.1| ABC transporter permease [Yersinia pestis biovar Microtus str.
           91001]
 gi|51598240|ref|YP_072431.1| ABC amino acid transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108810145|ref|YP_654061.1| ABC transporter permease [Yersinia pestis Antiqua]
 gi|108814127|ref|YP_649894.1| ABC transporter permease [Yersinia pestis Nepal516]
 gi|145601163|ref|YP_001165239.1| ABC transporter permease [Yersinia pestis Pestoides F]
 gi|150260956|ref|ZP_01917684.1| ABC transporter permease [Yersinia pestis CA88-4125]
 gi|162421222|ref|YP_001608460.1| polar amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926152|ref|ZP_02221984.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939972|ref|ZP_02228509.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166009637|ref|ZP_02230535.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213221|ref|ZP_02239256.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167401564|ref|ZP_02307058.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422869|ref|ZP_02314622.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425464|ref|ZP_02317217.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468127|ref|ZP_02332831.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis FV-1]
 gi|170026442|ref|YP_001722947.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186897481|ref|YP_001874593.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218931086|ref|YP_002348961.1| ABC transporter permease [Yersinia pestis CO92]
 gi|229839818|ref|ZP_04459977.1| ABC transporter permease [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229841903|ref|ZP_04462059.1| ABC transporter permease [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229896780|ref|ZP_04511943.1| ABC transporter permease [Yersinia pestis Pestoides A]
 gi|229904668|ref|ZP_04519779.1| ABC transporter permease [Yersinia pestis Nepal516]
 gi|270488379|ref|ZP_06205453.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294505633|ref|YP_003569695.1| ABC transporter permease [Yersinia pestis Z176003]
 gi|21961138|gb|AAM87666.1|AE014013_11 putative glutamate/aspartate ABC transport system permease protein
           [Yersinia pestis KIM 10]
 gi|45438610|gb|AAS64156.1| ABC transporter permease [Yersinia pestis biovar Microtus str.
           91001]
 gi|51591522|emb|CAH23194.1| ABC amino acid transporter, permease subunit [Yersinia
           pseudotuberculosis IP 32953]
 gi|108777775|gb|ABG20294.1| ABC transporter permease [Yersinia pestis Nepal516]
 gi|108782058|gb|ABG16116.1| ABC transporter permease [Yersinia pestis Antiqua]
 gi|115349697|emb|CAL22678.1| ABC transporter permease [Yersinia pestis CO92]
 gi|145212859|gb|ABP42266.1| ABC transporter permease [Yersinia pestis Pestoides F]
 gi|149290364|gb|EDM40441.1| ABC transporter permease [Yersinia pestis CA88-4125]
 gi|162354037|gb|ABX87985.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis Angola]
 gi|165912098|gb|EDR30738.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922012|gb|EDR39189.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991559|gb|EDR43860.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205519|gb|EDR49999.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958261|gb|EDR55282.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048946|gb|EDR60354.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055478|gb|EDR65271.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752976|gb|ACA70494.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186700507|gb|ACC91136.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229678786|gb|EEO74891.1| ABC transporter permease [Yersinia pestis Nepal516]
 gi|229691242|gb|EEO83295.1| ABC transporter permease [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696184|gb|EEO86231.1| ABC transporter permease [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700218|gb|EEO88254.1| ABC transporter permease [Yersinia pestis Pestoides A]
 gi|262363798|gb|ACY60519.1| ABC transporter permease [Yersinia pestis D106004]
 gi|262367734|gb|ACY64291.1| ABC transporter permease [Yersinia pestis D182038]
 gi|270336883|gb|EFA47660.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294356092|gb|ADE66433.1| ABC transporter permease [Yersinia pestis Z176003]
 gi|320017442|gb|ADW01014.1| ABC transporter permease [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 245

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 8/228 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
                  LT+  +A   V + +LG +L+       +        +    +  PLL    F
Sbjct: 18  WLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             F     +  +    L  + P       +  +  S EF++ ++ L+ Y+ AFIAE +R+
Sbjct: 78  WYFAASQFLPASWIPWL--NTPHEITLAGLTLAWPSFEFLAGFVGLTLYSTAFIAEELRA 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A
Sbjct: 136 GISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      +  +T +  +   +   +Y+ +  +I  +      +  ++
Sbjct: 196 ELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRTVVR 243



 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 40/89 (44%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ AT++G L+ A R S  K +      Y  
Sbjct: 5   HLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSA 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +    LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQFLPASWIPW 93


>gi|317481689|ref|ZP_07940722.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916868|gb|EFV38257.1| binding-protein-dependent transport system inner membrane component
           [Bifidobacterium sp. 12_1_47BFAA]
          Length = 366

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 114/266 (42%), Gaps = 16/266 (6%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           + +   I  ++    L   ++ +   PD    L + ++         T        + + 
Sbjct: 21  IRIVNWIAGILFAVVLVFILMRLHNPPDGENQLSWELWKPAVEREAWTDFYLPGLWMTIK 80

Query: 193 SFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           + ++ +V ++       + R       + +  + +       +  L++   ++      P
Sbjct: 81  ATIVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIVEFCRAVPVLLLMIFFWRWFAFAGLP 140

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                        SP + ++ +AL  Y  + +AE+VRSG+  +P GQ EA++ALGLT  +
Sbjct: 141 -------------SPSYWAVVLALVLYNGSVVAELVRSGVGNLPGGQREASLALGLTETQ 187

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           +   + +PQA+ +++P   +Q + +LK+++L   + + DL+     + +     ++ +++
Sbjct: 188 SLMEIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFNILQTLVM 247

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALK 395
              IY     +++     L +++  +
Sbjct: 248 AAVIYFIACWLLSRLAEWLPSRMQQR 273



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +   P     ++    L G   T       ++ A + G + G GRL  N LV  +  V V
Sbjct: 56  ELWKPAVEREAWTDFYLPGLWMTIKATIVAVVGAVVFGLVFGVGRLLPNPLVRGVSAVIV 115

Query: 134 EVFRNIPPLVVIFFLYKSV-LSVLPIPDHSIVLPFGMFLN 172
           E  R +P L+++ F ++    + LP P +  V+   +  N
Sbjct: 116 EFCRAVPVLLLMIFFWRWFAFAGLPSPSYWAVVLALVLYN 155


>gi|107023343|ref|YP_621670.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116690426|ref|YP_836049.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105893532|gb|ABF76697.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116648515|gb|ABK09156.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 237

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R    K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKRKWLSGAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +     +  +          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQAVRGTPML-DAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 PFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     +   +
Sbjct: 203 FGIAALLYLVISFTLVWLFRQAERR 227



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y    + G   T WL    +     +   +   R+S  K ++    +
Sbjct: 5   IQEYWRNYLYTDGYR---ITGVAITLWLLVVSIGLGFCLSVPLAVARVSKRKWLSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|152965191|ref|YP_001360975.1| ABC transporter inner membrane protein [Kineococcus radiotolerans
           SRS30216]
 gi|151359708|gb|ABS02711.1| binding-protein-dependent transport systems inner membrane
           component [Kineococcus radiotolerans SRS30216]
          Length = 332

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 102/256 (39%), Gaps = 27/256 (10%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
               F            +       V + V+GI   +    L R       +A+   +  
Sbjct: 56  WGFTFEAMNQSIVIRGFLLGTLLTTVLAMVIGIGGGVLLAVL-RLSGNPVLRAVSWAFTW 114

Query: 226 TFLIFGLPTLV--------LIALKYQL----------HFDKPVLGQFNF-------IGGS 260
            F       L+        L A  + L              P L  F         + G 
Sbjct: 115 FFRAIPRYVLLTFTGGLGALFATGFSLGVPFDFLLSDWLGTPELRLFTVPQGTIYDVLGG 174

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            V+   +   I L    AA++AEI R+GL++V RGQ EAA ALG++   A R V+LPQAM
Sbjct: 175 VVAGGLIGGVIGLGISEAAYMAEIARAGLLSVDRGQHEAAEALGMSKGLAMRRVVLPQAM 234

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           R I+PP  ++ + +LK++SL VA+    +L    G I  +T Q +   +  M  YL  + 
Sbjct: 235 RVIVPPTGNEVIAMLKDTSLLVAIPVNIELFYQLGQIGQRTYQVVATNMAAMLYYLIATS 294

Query: 380 MIALFMNRLNAKIALK 395
           ++ +    L  +    
Sbjct: 295 ILMVGQYFLEKRFGRG 310


>gi|157369179|ref|YP_001477168.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320943|gb|ABV40040.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 218

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 11/205 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              + S    +  +L    L      K   AL  +   + L  G P L+ + L +     
Sbjct: 19  WTLLLSLTAFLGGTLVTLPLLLLRLSKRKWALRFVRGYSELFQGTPLLMQLFLAF----- 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 F           + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL+ 
Sbjct: 74  ------FGLALFGIDVSPWTAAALALTLFTSAFLVDIWSGSIAALPKGQWEASHCLGLSF 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    V++PQA+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++ 
Sbjct: 128 GQTLVRVIVPQAVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKVF 187

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
            +    Y  +   ++ + + L  K 
Sbjct: 188 GLVALGYFLMCYPLSRYSHYLEKKF 212


>gi|311108044|ref|YP_003980897.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 16 [Achromobacter
           xylosoxidans A8]
 gi|310762733|gb|ADP18182.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 16
           [Achromobacter xylosoxidans A8]
          Length = 222

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +    ++ + + V G+ + L    L+RH  +    A   L     +    
Sbjct: 10  WRYREQLWDGIQVTLELTIIAVVAGLAIGLAGAVLTRHGPKPVKLA---LRAYVEVFRNT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P+L+ + + +           F   G     P F++  +ALS Y  A+  EI+R+GL ++
Sbjct: 67  PSLIQLFVVF-----------FVLPGLGLRMPPFVAAALALSLYFGAYAIEILRAGLDSI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PR Q+EA   LGL+  +  R ++L  A+R++ P L +Q + LL  +SLA  V   DL   
Sbjct: 116 PRSQIEAGHCLGLSTWQVYRHIVLAPALRNVYPALGTQLVILLLGTSLASQVSAEDLFHA 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           G  I ++T ++ E+  +   IY +L ++    +
Sbjct: 176 GSFIESRTYRSFEVYAVICGIYFTLVLITKALL 208



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 29/77 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     Y   +  G   T  L    ++    IG           K V    R YVEVF
Sbjct: 4   LNFQQVWRYREQLWDGIQVTLELTIIAVVAGLAIGLAGAVLTRHGPKPVKLALRAYVEVF 63

Query: 137 RNIPPLVVIFFLYKSVL 153
           RN P L+ +F ++  + 
Sbjct: 64  RNTPSLIQLFVVFFVLP 80


>gi|190894701|ref|YP_001984994.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700362|gb|ACE94444.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 219

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 14/222 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +     I + + + G VL +F   L+  +     + +   Y    +I G 
Sbjct: 10  WIARYVIMNGIAMTVSISLLAILAGSVLGVFVG-LALVYGGMILRLIVRAYTD--IIRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y +              G  + P F +  +AL+ + ++ + EIVR  L A+
Sbjct: 67  PVLVLVLASYYVSAAV----------GLDLGP-FSAGVLALAVFCSSHVGEIVRGALQAI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   VG A+L+  
Sbjct: 116 PKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVVGVAELLLR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              II++   +++   +   +Y  ++  I  F   +  K AL
Sbjct: 176 TQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 31/68 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I+ G   T  ++   ++  +++G  VG   +    ++  I R Y ++ R  P LV++  
Sbjct: 15  VIMNGIAMTVSISLLAILAGSVLGVFVGLALVYGGMILRLIVRAYTDIIRGTPVLVLVLA 74

Query: 148 LYKSVLSV 155
            Y    +V
Sbjct: 75  SYYVSAAV 82


>gi|85705012|ref|ZP_01036112.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670334|gb|EAQ25195.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 250

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I + +F  G+V+ L      + +     +   LL + T +I  +P LVLI + Y +  
Sbjct: 36  LQIALGAFGFGLVIGL-GGAYGKLYGGPLLRD--LLAVYTTVIRAVPELVLILILYYVGS 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G       ++    L     A+  E++R  + A+P GQ+EAA A G+ 
Sbjct: 93  DMINQAAIAMGYGRVEISGVVAGIWVLGVVQGAYATEVLRGAIQAIPPGQLEAARAFGMP 152

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M    P L + +L   K+++L   VGF++L          T      
Sbjct: 153 PLMTLRRVTIPAMMGFATPGLANLWLIATKDTALLAIVGFSELTLETRQAAGSTRAYFTF 212

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L    +YL +++   +   R+  
Sbjct: 213 FLAAGALYLIVTLFSGVIFARIEK 236



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G  N+  +A        +IG     G+L    L+  +  VY  V R +P LV+
Sbjct: 24  WGANLLRGLANSLQIALGAFGFGLVIGLGGAYGKLYGGPLLRDLLAVYTTVIRAVPELVL 83

Query: 145 IFFLYKSV 152
           I  LY   
Sbjct: 84  ILILYYVG 91


>gi|312867998|ref|ZP_07728202.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096402|gb|EFQ54642.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 228

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L    +LF   L + +  K  ++  ++Y++         L+L      
Sbjct: 18  PVTLLIMVVSILLSFFPALFL-ALGQIYKVKGVRSFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                     +I  S  T   +AEI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNSFFKSIGSHFNVFEINPIYYAFIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+R+A   ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTNRQAYIRIVFPQALRSALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   +Y+ +  +I    N L  ++ L
Sbjct: 197 FESYLVIFILYIVICGVIQWGFNLLEKRLTL 227



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 35/92 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  +    ++ +      +  G++   K V     VY+   R  PP+++I F
Sbjct: 12  ATLGGVPVTLLIMVVSILLSFFPALFLALGQIYKVKGVRSFSVVYLAFIRATPPILLILF 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            Y    S+L     SI   F +F  N      
Sbjct: 72  FYSLFPSLLNSFFKSIGSHFNVFEINPIYYAF 103


>gi|326779151|ref|ZP_08238416.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces cf. griseus XylebKG-1]
 gi|326659484|gb|EGE44330.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces cf. griseus XylebKG-1]
          Length = 243

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 11/210 (5%)

Query: 187 AKIFVFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             + + + VLG +L+ + A  L      +   A  +  +      G    + +   + L+
Sbjct: 19  LWVTLQATVLGALLAGVLAFALGLMAGSRLLLARGVSRVVVEFFRGTSLYIQL---FWLY 75

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P+L  +            +   +A      A+ AE+VR  + +VPRGQ EAAIAL L
Sbjct: 76  YAMPLLTGYEL-------TPVICGVVAFGLNFGAYGAEVVRGAINSVPRGQYEAAIALNL 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +  +    V+LPQA   +IP  T+  + LLK + L   +  ADL++V   + ++TG+ + 
Sbjct: 129 SPSRRLWKVILPQAWVQMIPSFTNLLIQLLKATPLLWLISAADLMTVIQQLRDRTGETLT 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             L  +  Y  L+  + + MN L      +
Sbjct: 189 AYLTLLAAYFVLAYALTMLMNLLERSAKRR 218



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T      G + A ++   +G    S   L   + RV VE FR     + +F+LY +
Sbjct: 18  GLWVTLQATVLGALLAGVLAFALGLMAGSRLLLARGVSRVVVEFFRGTSLYIQLFWLYYA 77

Query: 152 VL 153
           + 
Sbjct: 78  MP 79


>gi|283832470|ref|ZP_06352211.1| arginine ABC transporter, permease protein ArtM [Citrobacter
           youngae ATCC 29220]
 gi|291072129|gb|EFE10238.1| arginine ABC transporter, permease protein ArtM [Citrobacter
           youngae ATCC 29220]
          Length = 222

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + V S V+ ++L+L  T +      KT   + L+     L  G P 
Sbjct: 4   YLPELLKGLHTSLTLTVASIVVALILALIFTII---LTLKTPVLVWLVRAYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y      P L ++  +      P ++   IALS  +AA+  ++    + A+P 
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPLLWHLLSEP-WLCALIALSLNSAAYTTQLFYGAIRAIPE 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++ +     +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCGALGMSKKDTLA-ILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +T   + +      IYL ++ ++ L M  +  K    E +
Sbjct: 179 LLYGRTYDVM-VFGAAGVIYLIVNGLLTLMMRLIERKALAFEHR 221



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 40/114 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   +  L  + ++ A I+  +          ++ W+ R Y+ +F   P LV 
Sbjct: 4   YLPELLKGLHTSLTLTVASIVVALILALIFTIILTLKTPVLVWLVRAYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IF +Y        + ++ ++           L   +L          +  +  I
Sbjct: 64  IFLIYYGPGQFPTLQEYPLLWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAI 117


>gi|197286728|ref|YP_002152600.1| amino acid ABC transporter permease [Proteus mirabilis HI4320]
 gi|227355082|ref|ZP_03839493.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Proteus mirabilis ATCC 29906]
 gi|194684215|emb|CAR45713.1| putative amino acid ABC transporter, permease protein [Proteus
           mirabilis HI4320]
 gi|227164869|gb|EEI49716.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Proteus mirabilis ATCC 29906]
          Length = 245

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 11/235 (4%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +        + +          + SF   I+ +L    LS  +            I T 
Sbjct: 5   FLSHYLLEPHYLSWLWQGFLITLLISFWTIIIATLLGFLLSAAYDSHIAPLRWCAAIYTS 64

Query: 228 LIFGLPTLVLIALKYQ-----------LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           L    P LV +   Y            +  + P       +  S  S EF++  I L+ Y
Sbjct: 65  LFRNTPLLVQLFFWYFASGELLPQTAMIWLNTPHELSLFGLTLSWPSFEFLAGIIGLTFY 124

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +  FIA+ +R+G+  V +GQ  AA+ALGLTH ++ R V+LPQA R  +PPL  QY+N++K
Sbjct: 125 SVPFIAQELRAGIQGVRQGQKYAALALGLTHWQSMRYVILPQAFRIALPPLLGQYMNIIK 184

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           NSSL +A+G A+L      +  ++ +  E   +   +Y++   ++  +      +
Sbjct: 185 NSSLTMAIGVAELSYASRQVETESLRTFEAFGVATILYIAAIALMEAWGQWHQQR 239



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 44/92 (47%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
             Q +  Y  +  Y + +  GF+ T  ++F  +I AT++G L+ A   S    + W   +
Sbjct: 2   FAQFLSHYLLEPHYLSWLWQGFLITLLISFWTIIIATLLGFLLSAAYDSHIAPLRWCAAI 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           Y  +FRN P LV +FF Y +   +LP      
Sbjct: 62  YTSLFRNTPLLVQLFFWYFASGELLPQTAMIW 93


>gi|192291212|ref|YP_001991817.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
 gi|192284961|gb|ACF01342.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
          Length = 501

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 18/257 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FAT 205
           ++++ + + +     V+   + L+  GL      M     + +   V GIV S+    A 
Sbjct: 254 WRALATTVGMFAGIAVMVAALRLDRGGLPVVDTRMWGGLLVTLVVSVTGIVASMPIGIAL 313

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R       +   + +I  +    L T V+    Y L           F+ G+     
Sbjct: 314 ALGRRSTIPLIRIFSVAFIEFWRGVPLIT-VMFFATYMLPL---------FLPGNFTIDN 363

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            M + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T L++LPQA+R +IP
Sbjct: 364 LMRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKITGLIVLPQALRHVIP 423

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-----GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            L + ++ L K++SL   V   DL+            +              IY      
Sbjct: 424 GLVNSFIALFKDTSLVSIVALFDLLGQLRAAFADPTWSTPTTLFTGFAFTGLIYFVFCFG 483

Query: 381 IALFMNRLNAKIALKEK 397
           ++ +   +  ++    +
Sbjct: 484 MSRYSLSVEHRLNAHRR 500



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 57/138 (41%), Gaps = 7/138 (5%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGI--GFLSERAGFEIDQGIVPYTSDSSYATA 88
           +++  ++    ++ +  V N       ++G+  G     A   +D+G +P      +   
Sbjct: 233 LLITAIVVTALVFVLTGVRNGWRALATTVGMFAGIAVMVAALRLDRGGLPVVDTRMWG-- 290

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T  ++ +G++ +  IG  +  GR S   L+      ++E +R +P + V+FF 
Sbjct: 291 ---GLLVTLVVSVTGIVASMPIGIALALGRRSTIPLIRIFSVAFIEFWRGVPLITVMFFA 347

Query: 149 YKSVLSVLPIPDHSIVLP 166
              +   LP       L 
Sbjct: 348 TYMLPLFLPGNFTIDNLM 365


>gi|171911209|ref|ZP_02926679.1| amino acid ABC transporter, permease protein, putative
           [Verrucomicrobium spinosum DSM 4136]
          Length = 254

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 95/253 (37%), Gaps = 11/253 (4%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L  + +     L +L             +       +  L +       V S +  +V 
Sbjct: 10  LLAEVVWNLLLGLGMLLGIWFVFHAIKYNWHWESLWKWRWLILRGWGATVVVSALALMVS 69

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
                 L      +             L+ G P LVL+ + Y                  
Sbjct: 70  VPLGLLLMFGQRSRWIPVRLACRGCVELVRGTPLLVLLLIGYY-----------GVANAL 118

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            ++  ++     L+ + +++++EI R    ++   Q+EAA A+G   ++  R V+ PQA 
Sbjct: 119 GIAKPWLPGVCLLALFHSSYLSEIFRGAWESIGASQLEAARAVGFNQQQTWRFVIFPQAF 178

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R  +P    Q ++L+K+SSL   +G  +L  +      Q   A+E  +    +Y+ L+I 
Sbjct: 179 RRALPGTAGQMVSLIKDSSLLSVIGVEELTQMVRAANAQAYTALEGFIPLAVLYILLTIP 238

Query: 381 IALFMNRLNAKIA 393
           ++ +  R+  +  
Sbjct: 239 LSWWTRRIEERYK 251


>gi|194444936|ref|YP_002039906.1| glutamate/aspartate ABC transporter permease protein GltK
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194403599|gb|ACF63821.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
          Length = 224

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI V + V+GIV       +      +     P+ +
Sbjct: 1   MYEFDWSSIIPSLPYLLAGLVITLKITVTAVVVGIVWGTILAVM------RLSSFAPIAW 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +    ++ L+ +    +   P   Q             +S  +A S + AA+ +E
Sbjct: 55  FAKAYVNVFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++ RGQ  AA+ALG+TH ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y   S+  +L ++ L  +
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGAVYFVFSLSASLLVSYLKKR 222



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  +  + ++   + GT++   RLS+   +AW  + YV VFR+IP ++V+ +
Sbjct: 15  YLLAGLVITLKITVTAVVVGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLIVP 80


>gi|331267077|ref|YP_004326707.1| ABC transporter, membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
 gi|326683749|emb|CBZ01367.1| ABC transporter, membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
          Length = 240

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 1/215 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + + VL  + +LF   L + +  +  ++  L+Y++         L+L      
Sbjct: 18  PITLIIMIVAMVLSFLPALFL-ALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L                  +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQFLKSIGSDFDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIARVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E   +    Y+ +  +I    + L      KEK+
Sbjct: 197 FESYFVIFLQYILICGLIQWGFSVLEKGYVKKEKR 231



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 36/101 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    M+ + +    +  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGVPITLIIMIVAMVLSFLPALFLALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
               S+L     SI   F +F  +       +         
Sbjct: 74  SLFPSLLNQFLKSIGSDFDIFKLDPLYYAFIIYSLMTVGSL 114


>gi|239502915|ref|ZP_04662225.1| ABC-type arginine/histidine transport system, permease component
           [Acinetobacter baumannii AB900]
          Length = 237

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 87/220 (39%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                      +   A + V S  +G +L++    L+R       +    +++ T++  G
Sbjct: 12  YLWTDGLQMTGVAMTAWLLVLSIGIGFLLAVPL-SLARVSENIWLRGP--VWLFTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    + +   +  +          +A +  T  +  EI    + +
Sbjct: 69  TPLYIQLLIIYSGIYSFDYVHEHQTLD-AFFREGINCTILAFALNTGVYTTEIFAGAIRS 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EAA A G++  K    +++P  +R  +P   ++ + +L  +++A      D++ 
Sbjct: 128 IPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +   T        I   +Y  L+ ++     +L  +
Sbjct: 188 IARDVNAATYDTFSAFGIAAVLYAVLAFILIWIFRKLEKR 227


>gi|224368642|ref|YP_002602804.1| ABC-type amino acid transporter, permease component
           [Desulfobacterium autotrophicum HRM2]
 gi|223691358|gb|ACN14641.1| ABC-type amino acid transporter, permease component
           [Desulfobacterium autotrophicum HRM2]
          Length = 217

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 103/229 (44%), Gaps = 12/229 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
             G + N      P           +    LG V ++    L      K+     ++ + 
Sbjct: 1   MMGFYFNRLVEILPLFLKGLWMTTQIAFISLG-VCTVLGFSLGILRSGKSVILKWIIGVY 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G P +V + + +           F F         F +  +A++   +AFI EIV
Sbjct: 60  VSFVRGTPFVVQVFIIF-----------FIFPEWGLQLEAFSAALLAMAIMGSAFICEIV 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
             G+ ++ +GQ EAA + GL+  +  RLV+LPQAMR I+PPL  Q++ L+K++S+   +G
Sbjct: 109 AGGIASISKGQWEAAESSGLSRIQQMRLVILPQAMRVILPPLVGQFVLLIKDTSVVSVIG 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             DL  VG   + +  + + +  +   +Y  +S  + L  N L  K+A+
Sbjct: 169 VMDLTRVGWITVIRIPEGLMVFSLVGILYFVISYPLILLSNYLERKMAV 217



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  +AF  +   T++G  +G  R   + ++ WI  VYV   R  P +V +F +
Sbjct: 16  FLKGLWMTTQIAFISLGVCTVLGFSLGILRSGKSVILKWIIGVYVSFVRGTPFVVQVFII 75

Query: 149 YKSVLSV 155
           +      
Sbjct: 76  FFIFPEW 82


>gi|182438505|ref|YP_001826224.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178467021|dbj|BAG21541.1| putative amino acid ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 243

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 11/221 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           L      + +   + + + VLG +L+ + A  L      +   A  +  +      G   
Sbjct: 8   LFEEFPRVRSGLWVTLQATVLGALLAGVLAFALGLMAGSRLLLARGVSRVVVEFFRGTSL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            + +   + L++  P+L  +            +   +A      A+ AE+VR  + +VPR
Sbjct: 68  YIQL---FWLYYAMPLLTGYEL-------TPVICGVVAFGLNFGAYGAEVVRGAINSVPR 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAAIAL L+  +    V+LPQA   +IP  T+  + LLK + L   +  ADL++V  
Sbjct: 118 GQYEAAIALNLSPSRRLWKVILPQAWVQMIPSFTNLLIQLLKATPLLWLISAADLMTVIQ 177

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + ++TG+ +   L  +  Y  L+  + + MN L      +
Sbjct: 178 QLRDRTGETLTAYLTLLAAYFVLAYALTMLMNLLERSAKRR 218



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T      G + A ++   +G    S   L   + RV VE FR     + +F+LY +
Sbjct: 18  GLWVTLQATVLGALLAGVLAFALGLMAGSRLLLARGVSRVVVEFFRGTSLYIQLFWLYYA 77

Query: 152 VL 153
           + 
Sbjct: 78  MP 79


>gi|153800770|ref|ZP_01955356.1| membrane protein [Vibrio cholerae MZO-3]
 gi|124123745|gb|EAY42488.1| membrane protein [Vibrio cholerae MZO-3]
          Length = 229

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y           F   G       F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQV----LFFITGEFIEISPFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ E A ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQRETASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSIQ 219


>gi|269139978|ref|YP_003296679.1| glutamate/aspartate transport system permease protein [Edwardsiella
           tarda EIB202]
 gi|267985639|gb|ACY85468.1| glutamate/aspartate transport system permease protein [Edwardsiella
           tarda EIB202]
 gi|304559811|gb|ADM42475.1| Glutamate Aspartate transport system permease protein GltJ
           [Edwardsiella tarda FL6-60]
          Length = 246

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 9/235 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G        S   +T+  +   +V +F+LG +L +      R    +    +  
Sbjct: 12  QPAPFGGTTYLGWIWSGMQVTVALSLAAWVIAFLLGSLLGIL-----RTLPSRPLAMIGA 66

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAA 279
           LY+  F    +P +V     Y +  +       N+  G        F+S  + L  +TAA
Sbjct: 67  LYVELF--RNVPLIVQFFTWYLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGLFTAA 124

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + E VR+ + ++P GQ  A +A+G T  +  R VLLP A R I+PPLTS+ LNL+KNS+
Sbjct: 125 RVCEQVRAAIQSLPAGQKSAGLAMGFTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSA 184

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +A  +G  ++ +  G +++ +  A E        Y++++ ++ L M+ L  ++ L
Sbjct: 185 IASTIGLMEMAAQAGKLLDYSAHAYESFTAITLAYIAINGLLMLAMHLLERRLQL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F            ++Y   I  G   T  L+ +  + A ++G+L+G 
Sbjct: 3   IDWNWGIFLQPAPFG----------GTTYLGWIWSGMQVTVALSLAAWVIAFLLGSLLGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   ++ +A I  +YVE+FRN+P +V  F  Y  V  +LP    + 
Sbjct: 53  LRTLPSRPLAMIGALYVELFRNVPLIVQFFTWYLVVPELLPTDWGNW 99


>gi|163789691|ref|ZP_02184128.1| glutamine ABC transporter permease component [Carnobacterium sp.
           AT7]
 gi|159874913|gb|EDP68980.1| glutamine ABC transporter permease component [Carnobacterium sp.
           AT7]
          Length = 215

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 18/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +     T+ ++     FS ++G ++++      +    K    L   Y+  F    L  +
Sbjct: 13  IDGFLNTLYSSIIALFFSLIIGTLMAIL-----QLSKNKWISGLANAYVEFFKNIPLLII 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V+        +    L  F+  G       F +  I L+ YT+AFIAE VR+G++ VP+G
Sbjct: 68  VMFF------YVVVPLYWFSING-------FTAGTIGLTIYTSAFIAETVRAGIMGVPKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA ++ GLT  +  R ++LPQA + +IPPL +Q++NL+KNSS+   V   DL+  G  
Sbjct: 115 QTEAGLSTGLTQNETMRYIVLPQAFKIVIPPLGNQFINLVKNSSVLAMVTGLDLMYQGDL 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           I ++T    +  ++   IYL +++ +   M+ +  ++ +
Sbjct: 175 IASETFNTFDTYILIGLIYLIITLPLTYLMSYIERRLNV 213



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 46/93 (49%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++ GF+NT + +   +  + IIGTL+   +LS NK ++ +   YVE F+NIP L+
Sbjct: 7   TYPDVLIDGFLNTLYSSIIALFFSLIIGTLMAILQLSKNKWISGLANAYVEFFKNIPLLI 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           ++ F Y  V       +       G+ +     
Sbjct: 67  IVMFFYVVVPLYWFSINGFTAGTIGLTIYTSAF 99


>gi|293605796|ref|ZP_06688169.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292815791|gb|EFF74899.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 229

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 112/239 (46%), Gaps = 19/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +   L  G + N   L    LT+   A   + S  L ++++L           +    
Sbjct: 6   MQYWPTLLVGQYPNGP-LGGLALTLILAALGLLMSMPLALLIALA----------RVSPF 54

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L   S  L+  +  + L+ L +  +F  P L          V   F +L  AL  Y +
Sbjct: 55  GWLRVASKALVNVVRGMPLLMLIFWAYFVVPKLTG-------QVISGFWTLIFALVVYES 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+++E++RSG+ AVPRGQ+EA+ +LG+ +    R V+LPQA+ +++P +TSQ+++ +K +
Sbjct: 108 AYLSEVIRSGIEAVPRGQIEASRSLGVGYWTTMRKVVLPQALFNVLPSMTSQFVSTIKET 167

Query: 339 SLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           SL   +   +L      I N    Q +++  I   IY  +   ++  ++ L+ +I    
Sbjct: 168 SLGYVISVNELTFAANQINNLVLTQPLQVFGILAIIYFLVCFSLSRGLSWLDLRIRRSR 226


>gi|225025465|ref|ZP_03714657.1| hypothetical protein EIKCOROL_02363 [Eikenella corrodens ATCC
           23834]
 gi|224941749|gb|EEG22958.1| hypothetical protein EIKCOROL_02363 [Eikenella corrodens ATCC
           23834]
          Length = 229

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +   +  +      +T+  +A     S +LG+ +++      R          PL 
Sbjct: 11  MNWSYFWRVAPKFADAALITLKLSAYSIALSLLLGLAVAVITAYRVR----------PLY 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           + +   I       L+   + L++  P +              F    +AL    A++++
Sbjct: 61  WPARAYIELSRNTPLLIQLFFLYYGLPKV--------GIKWDGFTCGILALVFLGASYMS 112

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL++VP+GQ+EAA A+GL+  +  R V+LPQA    +P + +  L L+K +S+  
Sbjct: 113 EALRAGLLSVPKGQVEAAKAIGLSRWQVFRFVVLPQAWAVSVPAVGANVLFLIKETSVVS 172

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AV  A+L+ V   II    +  E +L+    YL + + ++L       ++ 
Sbjct: 173 AVAVAELMFVTKDIIGMDYKTNEALLLLFISYLIILLPVSLLARWAERRLR 223



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           + T  L+   +  + ++G  V        + + W  R Y+E+ RN P L+ +FFLY  + 
Sbjct: 28  LITLKLSAYSIALSLLLGLAVAVITAYRVRPLYWPARAYIELSRNTPLLIQLFFLYYGLP 87

Query: 154 SVLPI 158
            V   
Sbjct: 88  KVGIK 92


>gi|219667105|ref|YP_002457540.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219537365|gb|ACL19104.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 195

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 13/184 (7%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           H K  +A+  +Y+    I   P ++ +   Y      P +          + P F    +
Sbjct: 24  HLKLFRAINRVYVEF--IQNTPLVIQVFFVYN---GLPHI--------GLMLPVFSVGVL 70

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +  Y  A+IAE+VR+G+ A+ RGQMEAA++ G ++  A R V+LPQA R ++PPLT+Q 
Sbjct: 71  GVGVYHGAYIAEVVRAGIQAIHRGQMEAALSQGFSYWGAMRHVILPQAARVVLPPLTNQA 130

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L+KN+S+   +   DL+    +            +    +YL L   +A     L  K
Sbjct: 131 VSLIKNTSVLAMIAGGDLMYRADSWSAGNIYYGPAYVTAGLLYLLLCFPLAQLAQYLERK 190

Query: 392 IALK 395
           + + 
Sbjct: 191 MEVS 194


>gi|148658093|ref|YP_001278298.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus sp. RS-1]
 gi|148570203|gb|ABQ92348.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus sp. RS-1]
          Length = 403

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 106/213 (49%), Gaps = 19/213 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFSF LG++L+L      R       + L + YI         +++ +A       
Sbjct: 207 VVGIVFSFPLGVLLAL-----GRQSSLPVVRWLCVAYIELIRGVPFISVLFMA------- 254

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L    F+ G T+    +     +  ++AA++AE VR GL ++PRGQ EAA ALGL 
Sbjct: 255 ---QLMLPLFLPGITID-RVVRAMAGVVIFSAAYLAENVRGGLQSIPRGQYEAARALGLN 310

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQA 363
             K T L++LPQA+R++IP L  Q++ L K++SL V VG  DL+ +  T++ Q    G  
Sbjct: 311 PWKMTLLIILPQALRAVIPILVGQFIALFKDTSLVVIVGLLDLMGIARTVLAQPDFLGLQ 370

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            E+     FIY     +++ F  RL AK+    
Sbjct: 371 AEVYTFVAFIYGIFCYLMSAFSQRLEAKLHTGR 403


>gi|319945661|ref|ZP_08019913.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
 gi|319748260|gb|EFW00502.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus australis ATCC 700641]
          Length = 228

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L    +LF   L + +  K  ++  ++Y++         L+L      
Sbjct: 18  PVTLLIMVVSILLSFFPALFL-ALGQIYKVKGVRSFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                     +I  S  T   +AEI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNSFFKSIGSHFNVFEINPIYYAFIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+R+A   ++ PQA+R+ +P L +  +NL+K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTNRQAYIRIVFPQALRAALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   +Y+ +  +I    N L  ++ L
Sbjct: 197 FESYLVIFILYIVICGVIQWGFNLLEKRLTL 227



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 35/92 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  +    ++ +      +  G++   K V     VY+   R  PP+++I F
Sbjct: 12  ATLGGVPVTLLIMVVSILLSFFPALFLALGQIYKVKGVRSFSVVYLAFIRATPPILLILF 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            Y    S+L     SI   F +F  N      
Sbjct: 72  FYSLFPSLLNSFFKSIGSHFNVFEINPIYYAF 103


>gi|312278252|gb|ADQ62909.1| Amino acid (Glutamine) ABC transporter, permease protein
           [Streptococcus thermophilus ND03]
          Length = 213

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T+     + + S  LGIVL+            K    L  LY+
Sbjct: 1   MSYVLEVLPALLNGAVVTLQVFFIVIILSIPLGIVLAFLMQ-----IKFKPLNWLLTLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                 V     +  +A +   AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFVYYV-----------LPSVGIVFDRLPAAILAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P+GQ EAA  L L+  +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGILAIPKGQYEAAKMLKLSSFQTIRYIILPQVVKIVLPSIFNEIINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+    T  N+    +  + +   IYL L  ++ +    +  K 
Sbjct: 163 GVGDLLLESRTAANRDA-TLAPMFVAGAIYLILVGVVTVASKNIEKKF 209



 Score = 43.0 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 39/101 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G V T  + F  +I +  +G ++        K + W+  +YV + R  P L+ + F
Sbjct: 10  ALLNGAVVTLQVFFIVIILSIPLGIVLAFLMQIKFKPLNWLLTLYVWIMRGTPLLLQLIF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  + SV  + D          LN              A 
Sbjct: 70  VYYVLPSVGIVFDRLPAAILAFTLNYAAYFAEIFRGGILAI 110


>gi|313498369|gb|ADR59735.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 178

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K  + + +  I T  +  +P +V +   +           F F         F++
Sbjct: 2   RISKHKILRNIAIALILT--LRSIPPIVWLFFIF-----------FAFSQYVVQLSPFVA 48

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L+  T+A +AEI R  L AVP+GQ EA   LGL+  +    V++PQ +R  +P  +
Sbjct: 49  AIIGLALITSANMAEIYRGALSAVPKGQYEATKVLGLSTWQKYVHVIVPQVVRISVPAAS 108

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  + LLK++++A  +G ++L  V   I  +T + + +  I   +Y ++S+ +AL   +L
Sbjct: 109 TYCIGLLKDTAIASTIGVSELAQVANHISQETFRGLSVYAIAGLLYFAVSVFMALLSRQL 168

Query: 389 NAKIALKEKK 398
           +  +  K ++
Sbjct: 169 DIHLRAKVER 178


>gi|218517085|ref|ZP_03513925.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 219

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +     I + + + G V+ +F   L+  +     + +   Y    +I G 
Sbjct: 10  WIARYVIMNGIAMTVSISLLAILAGSVIGVFVG-LALVYGGMILRLIVRAYTD--IIRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y +              G  + P F +  +AL+ + ++ + EIVR  L A+
Sbjct: 67  PVLVLVLASYYVSAAV----------GLDLGP-FSAGVLALAIFCSSHVGEIVRGALQAI 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA A+GLT  +    VL PQAMR  +P   +    ++K S+L   +G A+L+  
Sbjct: 116 PKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              II++   +++   +   +Y  ++  I  F   +  K
Sbjct: 176 TQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYVERK 214



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I+ G   T  ++   ++  ++IG  VG   +    ++  I R Y ++ R  P LV++  
Sbjct: 15  VIMNGIAMTVSISLLAILAGSVIGVFVGLALVYGGMILRLIVRAYTDIIRGTPVLVLVLA 74

Query: 148 LYKSVLSV 155
            Y    +V
Sbjct: 75  SYYVSAAV 82


>gi|209528046|ref|ZP_03276526.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
 gi|209491532|gb|EDZ91907.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
          Length = 405

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 70/343 (20%), Positives = 143/343 (41%), Gaps = 41/343 (11%)

Query: 81  SDSSYAT-AILVGFVN--------------TFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
               Y    +L+G V+              T   + + +I  +++  L+     + +  +
Sbjct: 78  PSDQYWRLWLLLGIVSILSGLTWGFLARRQTILFSQNIVIFLSVVAMLMALLPTAISYRI 137

Query: 126 AWICRVYVEVF-----RNI---PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
             I  ++V VF     R I    PL+  +  +   + ++              ++     
Sbjct: 138 IAIALLFVFVFSSWGGRQIGSRKPLLGKWLPFSWFVLLIISLWLIGGGLGLRGVSTDLWG 197

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
              LT+  +    +  F +G++L+L      R       + L + YI          L L
Sbjct: 198 GLMLTLLMSVISILLCFPIGVLLAL-----GRQSDLPVIRGLSIAYIEIIR-----GLPL 247

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           I + +      P+     F+         +   + L+ +++A++AE VR GL A+PRGQ 
Sbjct: 248 ITILFMGQILLPL-----FLPEGMRPDRILRAIVGLTMFSSAYLAENVRGGLQAIPRGQY 302

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ALGL       L++LPQA++  IP +  Q+++L ++++L   VG  +L+ +  +I+
Sbjct: 303 EAAKALGLNPALTMVLIILPQALKISIPSIVGQFISLFQDTTLLAIVGLVELLGISRSIL 362

Query: 358 NQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 G+  E+ L    +Y     +++L   +L  ++  + +
Sbjct: 363 ANPQFLGRYAEVYLFLGVLYWLFCYLMSLASRKLEKQLNTENR 405


>gi|115359034|ref|YP_776172.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115284322|gb|ABI89838.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 225

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 7/206 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V +  +G++L +     +       G      Y  T  + G+P  +++ + Y  
Sbjct: 17  VTLELAVAALCVGMLLGIAG---ASAKLSSLGWLRHATYALTNFLRGIPEFLILLICY-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F    L    F G   +SP F +  IAL+    A+ +E+ R   IAVP GQ+EAA A G
Sbjct: 72  -FGLSHLLNAQFDGAFVISP-FSAGVIALAVVFGAYSSEMFRGAFIAVPAGQIEAARAYG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +    V LPQA R  +P L + + NLLK++SL   VG  D++         T Q  
Sbjct: 130 MTRLQTLWHVRLPQAWRICLPSLNNMWQNLLKDTSLVSIVGLEDMLRKANIAAQFTKQPF 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
              +    +Y    ++       L  
Sbjct: 190 VFYVTVGIVYFGFLVVSNPVFAWLER 215


>gi|330875047|gb|EGH09196.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330965314|gb|EGH65574.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 220

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    + V G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWTAREVLWSGFLTSIQCSALAIVAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL      + +  P L              F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVL-----AVFYMVPAL--------GWHISAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+PRGQ+EA  A+GL   +  R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 219



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP-- 140
            +    +  GF+ +   +   ++  T+IG L G              R+YV++ R  P  
Sbjct: 12  WTAREVLWSGFLTSIQCSALAIVAGTLIGMLAGLVLTYGGFFARLPIRLYVDLIRGTPVF 71

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            LV+  F     L        +  +   +F
Sbjct: 72  VLVLAVFYMVPALGWHISAFQAGAIGLTLF 101


>gi|256825959|ref|YP_003149919.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
 gi|256689352|gb|ACV07154.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
          Length = 215

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 96/225 (42%), Gaps = 16/225 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLG-IVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           ++ N   L    + ++   K+ +   V+G +V ++     +    E        L  +  
Sbjct: 4   LWDNEVALEALPVMLEAFVKVTLVVTVIGSLVAAVLGLVWAVSLRELPAVVGKPLGWALD 63

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++   P  + +   Y           FN + G  V        + +  + + ++AE  R+
Sbjct: 64  VVRMTPLPLQLLFVYFT---------FNQLSGMVV------GIVVMGIHYSTYMAESYRA 108

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +VPRGQ EAA AL L  R+    +++PQA+R+ +P L    + + K++   + +G  
Sbjct: 109 GIESVPRGQWEAATALSLPARRTWTDLIIPQALRNTLPSLGGWAIAMFKDTPFLIVIGVP 168

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++V+    +  Q     E + I   I+L  S    L M  L  K+
Sbjct: 169 EMVTAAQRVGAQNFTYTEALTIAGAIFLVASYPTFLLMRYLEKKL 213


>gi|307321919|ref|ZP_07601302.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti AK83]
 gi|306892432|gb|EFN23235.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Sinorhizobium meliloti AK83]
          Length = 217

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 12/204 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL-IFGLPTLVLIALKYQLH 245
           A I V +   G   +L    +   F      AL +  I     I   P LV +   + + 
Sbjct: 19  AVITVVATFGGFAGALIGGGILSIFLRTNIVALRIFAIGFIYCIRNTPLLVQLYFVFYVL 78

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D                       + LS + + F +E+ R+G+ +VPRGQ EAA ALGL
Sbjct: 79  PDM-----------GITISALGCGILGLSIHYSTFFSEVYRAGIASVPRGQFEAADALGL 127

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              K    ++ PQA++ I+P L +  + + K + L  A+   +L      I  QT +  E
Sbjct: 128 HTTKKWMFIVGPQAIKPILPVLGNYLVGMFKETPLLAAITVVELFGKAQNIAGQTYRYNE 187

Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389
             L+   I+L +S+  +  + +L 
Sbjct: 188 PYLMVALIFLIISVPCSFAIRKLE 211



 Score = 36.8 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    S    +L G V T    F G   A I G ++     +    +      ++   RN
Sbjct: 5   FEFAQSILPTLLQGAVITVVATFGGFAGALIGGGILSIFLRTNIVALRIFAIGFIYCIRN 64

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            P LV ++F++  +  +            G+ ++          
Sbjct: 65  TPLLVQLYFVFYVLPDMGITISALGCGILGLSIHYSTFFSEVYR 108


>gi|295699311|ref|YP_003607204.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438524|gb|ADG17693.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 220

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 12/209 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQLH 245
               + S+  G+ + L    L        G+ L   L +   L+ G P LV + L Y   
Sbjct: 20  LATTLGSWAAGVAIGLVIGFLIAVLQLFCGRWLRAALRVYIELLRGTPFLVQLFLLYYGG 79

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                        G T+ P   +  + L  Y +A+ AE  RSG  +VP+G +EAA  LGL
Sbjct: 80  PSI----------GLTLEP-MTAGIVGLGLYGSAYFAEAFRSGFQSVPKGHLEAASCLGL 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +A   +  PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +E
Sbjct: 129 TRWQAIVRIQAPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFVE 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +L+    YL+L  + +       A++A 
Sbjct: 189 TLLVLCVCYLALVELTSRAGMWAEARLAR 217



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T     +G+    +IG L+   +L   + +    RVY+E+ R  P LV +F L
Sbjct: 16  IAAGLATTLGSWAAGVAIGLVIGFLIAVLQLFCGRWLRAALRVYIELLRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y    S+    +       G+
Sbjct: 76  YYGGPSIGLTLEPMTAGIVGL 96


>gi|240947950|ref|ZP_04752377.1| arginine transporter permease subunit ArtM [Actinobacillus minor
           NM305]
 gi|257465092|ref|ZP_05629463.1| arginine transporter permease subunit ArtM [Actinobacillus minor
           202]
 gi|240297744|gb|EER48203.1| arginine transporter permease subunit ArtM [Actinobacillus minor
           NM305]
 gi|257450752|gb|EEV24795.1| arginine transporter permease subunit ArtM [Actinobacillus minor
           202]
          Length = 224

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 6/226 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LSF    + T+  +   S V+  V+++F T L      K  K     Y+  F   G
Sbjct: 1   MMDYLSFIAQGIPTSLGLMATSLVIAFVIAVFFTFLL-SMENKIVKGFVNGYLMLFT--G 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   L Y            +       S  +    +AL+  +AA+  ++    + A
Sbjct: 58  TPLLVQFFLIYSGP--GQFQWLIDSPLWILFSDAWFCAVLALALNSAAYSTQLFHGAVKA 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ E   ALGL+       +L+P A++  +P  +++ + + K +SLA  +   D++ 
Sbjct: 116 IPKGQWETCAALGLSRLDTL-KILIPYALKRALPSYSNEIILVFKGTSLASTITILDIMG 174

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               +      AI I  +   IYL ++ ++ + + +L  K+   E+
Sbjct: 175 YARQLYGTEYDAIGIYSMAGLIYLVITGIMTILLRKLEHKVLAFER 220


>gi|153949784|ref|YP_001403106.1| polar amino acid ABC transporter permease [Yersinia
           pseudotuberculosis IP 31758]
 gi|152961279|gb|ABS48740.1| polar amino amino acid ABC transporter, PAAT family, permease
           protein [Yersinia pseudotuberculosis IP 31758]
          Length = 245

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 8/228 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
                  LT+  +A   V + +LG +L+       +        +    +  PLL    F
Sbjct: 18  WLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             F     +  +    L  + P       +  +  S EF++ ++ L+ Y+ AFIAE +R+
Sbjct: 78  WYFAASQFLPASWIPWL--NTPHEITVAELTLAWPSFEFLAGFVGLTLYSTAFIAEELRA 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V +GQ  AA ALGLT  ++ R V+LPQA++  +PPL  QY+N++KNSSLA+A+G A
Sbjct: 136 GISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L      +  +T +  +   +   +Y+ +  +I  +      +  ++
Sbjct: 196 ELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRTVVR 243



 Score = 63.4 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 40/89 (44%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +     Y   +  GF+ T W++   ++ AT++G L+ A R S  K +      Y  
Sbjct: 5   HLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSA 64

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +FRN P L+ +FF Y +    LP      
Sbjct: 65  LFRNTPLLIQLFFWYFAASQFLPASWIPW 93


>gi|196248813|ref|ZP_03147513.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. G11MC16]
 gi|196211689|gb|EDY06448.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. G11MC16]
          Length = 206

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 6/188 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R    +  +    +Y+  F   G   +V +   + +++  P+L +            F
Sbjct: 19  LGRLAKSRWIRWTTNIYVEFF--RGTSLVVQL---FWVYYALPMLAKAIPFLPPLNLSSF 73

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  IA+S    A+++E VRS ++AV RGQ EAAIAL +T  +  RLV+LPQA+R ++P 
Sbjct: 74  WAGVIAVSLNYGAYVSETVRSCILAVDRGQHEAAIALNMTRFQRMRLVILPQAVRMMLPD 133

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFM 385
             +  + +LK++SL   +G  D+   G    N      I +  + +  Y  +++ +    
Sbjct: 134 FGNNLIQMLKSTSLVSLIGLTDITYAGMVFRNSNIDLGILVFTMMLVFYFLIALPLIWLT 193

Query: 386 NRLNAKIA 393
            R    ++
Sbjct: 194 RRAERAVS 201


>gi|187923550|ref|YP_001895192.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187714744|gb|ACD15968.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 237

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 87/218 (39%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + V S  +G   ++    ++R   ++       LY  T++  G P
Sbjct: 14  YWDGQRMSGLAVTLWLLVASVGIGFCAAIPL-AVARVSKKRWLSTPVRLY--TYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + L Y   +    +     +  +     F    +A +  T A+  EI    + +  
Sbjct: 71  LYVQLLLIYTGMYSLEFVRSHQLLD-AFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTS 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R +++P A+R  +P  +++ + +L  +++A      D++ V 
Sbjct: 130 HGEVEAARAYGMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + T Q+ +   +   IYL +S ++     R    
Sbjct: 190 RDANSATYQSFDAFGLAALIYLVVSFVLVALFRRAERH 227



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +         +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHS 162
             + S+  +  H 
Sbjct: 80  TGMYSLEFVRSHQ 92


>gi|111023904|ref|YP_706876.1| glutamate transport system permease protein GluD [Rhodococcus
           jostii RHA1]
 gi|110823434|gb|ABG98718.1| probable glutamate transport system permease protein GluD
           [Rhodococcus jostii RHA1]
          Length = 275

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 20/251 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +++      + S   +      +     L    L     T+       V S V G++L+ 
Sbjct: 42  IIVALGLYQLGSHGQLSPDLWSVLLDRDLMRSVLKGLLATIQCAIVSIVLSVVFGMILAA 101

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                SR           ++ +   +  GLP LVLI   +                   +
Sbjct: 102 MRMSDSRLLRG-------VVRVWVEIFRGLPLLVLIFFIF-----------LGAPQFGII 143

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P F +L + +S Y +A ++EI R+G+ ++PRGQ EAA A+G+   +  R++LLPQ +R 
Sbjct: 144 VPTFWALALGISLYNSAVMSEIFRAGIASLPRGQAEAAAAIGMRKTQIFRIILLPQGIRI 203

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIM 380
           ++P L SQ + ++K +SL   +G+ +L+  G   +   G   AI + ++   IYL +++ 
Sbjct: 204 MLPALISQVVTIVKETSLGFVIGYTELLRSGRVAVEYLGGQYAIPVYVLIAIIYLLMNVG 263

Query: 381 IALFMNRLNAK 391
           ++    R++A+
Sbjct: 264 LSKLARRIDAR 274



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 48/97 (49%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             ++L G + T   A   ++ + + G ++ A R+S ++L+  + RV+VE+FR +P LV+I
Sbjct: 71  MRSVLKGLLATIQCAIVSIVLSVVFGMILAAMRMSDSRLLRGVVRVWVEIFRGLPLLVLI 130

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           FF++        I      L  G+ L N  +      
Sbjct: 131 FFIFLGAPQFGIIVPTFWALALGISLYNSAVMSEIFR 167


>gi|81428468|ref|YP_395468.1| amino acid ABC transporter transmembrane protein [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78610110|emb|CAI55159.1| Putative amino acid ABC transporter, membrane-spanning subunit
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 213

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 13/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245
           AK+ +  F L ++ ++    L         K L  LL +  +L+ G P L+ +   +   
Sbjct: 15  AKMTLAIFSLTVIGAIPLGLLLSLGLLSKFKPLHYLLNLYVWLMRGTPLLLQLIFVF--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  PV+          V   F +  IA     AA+ AEI R G  AV  GQ+EAA  LGL
Sbjct: 72  YGLPVI--------GIVFNRFDAALIAFILNYAAYFAEIFRGGFQAVDDGQIEAASVLGL 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +    +++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G     +    + 
Sbjct: 124 TYPQTILKIIVPQTVKIVLPSVGNEVINLIKDSSLVYVIGIGDLLRAGNVASARDVNLVP 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +L+   IYL+L+ +    + RL        
Sbjct: 184 -LLLVGVIYLALTAICTWLLGRLEQYYRYYR 213


>gi|260424825|ref|ZP_05779011.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403293|gb|EEW96840.1| glutamine ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 244

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 18/229 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F M            T+   A     SF+ G+V+S+   R       K    LPL   
Sbjct: 24  IDFMMKYAPLFAKAAWTTLGIGAAGIFLSFLAGLVISVIRYR-------KIPFLLPLSTA 76

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P LV +   Y           F                  L+    +++AE 
Sbjct: 77  YVELSRNTPLLVQLFFLY-----------FGLPKAGIHISGETCAAAGLTFLGGSYMAEA 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +RSG+ +V   Q E+A ALGLT  +  R V+ PQA    +PPL +  L L+K +S+    
Sbjct: 126 LRSGIESVSVSQYESAAALGLTEHQIFRFVVFPQAFTVSLPPLCANVLFLIKETSVFSVC 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              DL+ +   +I    +  E + + +  YL + + I+   + L  ++ 
Sbjct: 186 AVPDLMYIAKDLIGLYYKTDETLWMLVISYLIILLPISAGSSLLERRLR 234



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%)

Query: 66  ERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
            + G  + + I+       YA         T  +  +G+  + + G ++   R      +
Sbjct: 11  RKGGAILKELILDIDFMMKYAPLFAKAAWTTLGIGAAGIFLSFLAGLVISVIRYRKIPFL 70

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
             +   YVE+ RN P LV +FFLY  +        
Sbjct: 71  LPLSTAYVELSRNTPLLVQLFFLYFGLPKAGIHIS 105


>gi|134282420|ref|ZP_01769125.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|134246458|gb|EBA46547.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
          Length = 315

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 4/219 (1%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215
             D  +   + M+L    L    L++       +  F L I       + R +   +   
Sbjct: 74  EMDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVA 133

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS 
Sbjct: 134 FRNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLALRWPSFEFVAGWLGLSG 191

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+
Sbjct: 192 YTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLI 251

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           KNSSL +A+G A+L      +  +T +      +   +Y
Sbjct: 252 KNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLY 290



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 83  YLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 142

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 143 LLFWYFGVAALLPEPAMAW 161


>gi|153011816|ref|YP_001373029.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563704|gb|ABS17200.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 216

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 14/225 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F            +     + + +F  G  L+L    L   +     + + L      + 
Sbjct: 5   FSTWDIFRNLIAAVPWTLYLSLIAFAGGASLALLLLVLRLTYPRTLSRPISL---YVSVF 61

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y           F        +   ++  + L  Y++A++ E     +
Sbjct: 62  QGTPLLMQLFLVY-----------FGLALIGLQTTPLLAASLCLWIYSSAYLTETWYGCV 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+P+GQ EA+ +LGL      RL++LPQA+R  +PP     + ++KN+SLA  VGF +L
Sbjct: 111 LAIPKGQWEASSSLGLKSWPQMRLIILPQAVRISVPPTVGILVQVVKNTSLASIVGFVEL 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 I N T +   +      IY  +   I+L    +  +  +
Sbjct: 171 TRASQMIANATFEPFLVYGAVSLIYFVICFSISLGGKWVEERTKI 215


>gi|115524737|ref|YP_781648.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris BisA53]
 gi|115518684|gb|ABJ06668.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris BisA53]
          Length = 500

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 20/234 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            ++ R      +T+  +    V S  +GI L+L      R       +   +++I  +  
Sbjct: 282 IVDTRMWGGLLVTLVVSVTGIVASMPIGIALAL-----GRRSTIPLIRIFSVMFIEFWRG 336

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             L T VL    Y L           F+ G+      + + I ++ +  A+ AE+VR GL
Sbjct: 337 VPLIT-VLFFATYMLPL---------FLPGNFTVDGMVRVLIGIALFAGAYNAEVVRGGL 386

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRGQ EA+ ALGL++ K T L++LPQA+R +IP L + ++ L K++SL   V   DL
Sbjct: 387 QAIPRGQAEASSALGLSYWKTTGLIVLPQALRHVIPGLVNSFIALFKDTSLVSIVALFDL 446

Query: 350 VSVGGT-----IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +          + +              IY      ++ +   +  ++   ++ 
Sbjct: 447 LGQLRAAFSDPVWSTPTTLFTGFAFTGIIYFVFCFGMSRYSLSVEHRLNAHQRH 500



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  ++ +G++ +  IG  +  GR S   L+     +++E +R +P + V+FF 
Sbjct: 287 MWGGLLVTLVVSVTGIVASMPIGIALALGRRSTIPLIRIFSVMFIEFWRGVPLITVLFFA 346

Query: 149 YKSVLSVLP 157
              +   LP
Sbjct: 347 TYMLPLFLP 355


>gi|254386080|ref|ZP_05001394.1| glutamate transporter permease [Streptomyces sp. Mg1]
 gi|194344939|gb|EDX25905.1| glutamate transporter permease [Streptomyces sp. Mg1]
          Length = 297

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 17/270 (6%)

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL-PFGMFLNNRGLSFPTLTMDTNAK 188
            +Y  VF  +  LV+ + L           D                +     T+     
Sbjct: 18  WIYSGVFVVLFALVLWWALGLMSEKGQLEADKWTPFVTDSDVWTTFLIPGLLETLKAGVI 77

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             V +  LG +L +   RLS H   +        ++  F    +  L+L        F  
Sbjct: 78  AVVIALPLGALLGI--GRLSDHAWVRVPVG---AFVEFFRAIPVLMLML--------FGS 124

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            +  QF+ +  S+      ++   L  Y +A IAEIVR+G+ ++PRGQ +AA A+G+   
Sbjct: 125 ALYVQFSSV--SSDLRPLYAVVTGLVLYNSAVIAEIVRAGVQSLPRGQADAAKAIGMRKG 182

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA-VGFADLVSVGGTIINQTGQAIEII 367
           +    VL+PQA+ +++P L SQ + +LK+++L    +G A+L+S+   I       I   
Sbjct: 183 QTMVHVLIPQAVTAMLPALVSQLVVILKDTALGGTLLGLAELLSMARQISANYSNTIATF 242

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   IY+ ++  +    + L  +    +K
Sbjct: 243 TVIALIYILVNFALTSVASFLEGRQRRSQK 272



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 21/145 (14%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +V N     +  +L  ++  W +                G +SE+   
Sbjct: 2   SSVLYDTPGPKAKVRNWIYSGVFVVLFALVLWWAL----------------GLMSEKGQL 45

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E D+     T    + T ++ G + T       ++ A  +G L+G GRLS +  V     
Sbjct: 46  EADKWTPFVTDSDVWTTFLIPGLLETLKAGVIAVVIALPLGALLGIGRLSDHAWVRVPVG 105

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSV 155
            +VE FR IP L+++ F     +  
Sbjct: 106 AFVEFFRAIPVLMLMLFGSALYVQF 130


>gi|125718885|ref|YP_001036018.1| ABC-type arginine/histidine transporter, permease protein, putative
           [Streptococcus sanguinis SK36]
 gi|125498802|gb|ABN45468.1| ABC-type arginine/histidine transporter, permease protein, putative
           [Streptococcus sanguinis SK36]
          Length = 228

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +L    L + +     +   ++Y++         L+L      
Sbjct: 18  PVTLIIMVVAILLSFIPALLL-ALGQIYKVWGVRTFSVVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +                   +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQIFKSLGSQVDVFKFNPLYYAFIIYSLMTTGSLSEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+ +A R ++ PQA+RS +P L +  +NL+K +SL   +   D+ ++     + + Q 
Sbjct: 137 GLTNFQAYRRIVFPQALRSALPNLANLVINLVKGTSLVFVMTVKDITALAKIEASHSYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   IYL +  +I      L  + AL
Sbjct: 197 SESYLVIFVIYLIICGLIQWIFRGLEKRSAL 227



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 35/93 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + I   L+  G++     V     VY+   R  PP+++I F Y
Sbjct: 14  LKGIPVTLIIMVVAILLSFIPALLLALGQIYKVWGVRTFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
               S+L     S+     +F  N       + 
Sbjct: 74  SLFPSLLNQIFKSLGSQVDVFKFNPLYYAFIIY 106


>gi|304414485|ref|ZP_07395705.1| putative amino acid transport system permease [Candidatus Regiella
           insecticola LSR1]
 gi|304283203|gb|EFL91605.1| putative amino acid transport system permease [Candidatus Regiella
           insecticola LSR1]
          Length = 241

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/230 (23%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +       FP L +   A   + S + G+  ++  T L       TG       I   ++
Sbjct: 10  WRYLLWGGFPELPLGGAALTLLISLMAGLASAILGTLLGVLLAMTTGFW---GQILAAVL 66

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                + +I L +  +F  P++   +        PE  ++  AL   T++++A  V++G+
Sbjct: 67  GFFRAIPVIMLIFWTYFLLPIIFGVDI-------PEITTVVCALMLITSSYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AV  GQ +A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  VG  +L
Sbjct: 120 LAVGAGQWQAGLSLGFNRWQVLLFIILPQALRMMVPSFVNQWIALIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   + N++    +EI L    IY  L +++   +N +  +  +  ++
Sbjct: 180 TFLATQVNNRSMVYPMEIFLFVGCIYFVLCLLLDFLVNAITNEFRVTARR 229


>gi|292487613|ref|YP_003530485.1| putative glutamate/aspartate ABC transporter inner membrane protein
           [Erwinia amylovora CFBP1430]
 gi|292898852|ref|YP_003538221.1| glutamate/aspartate ABC transporter permease [Erwinia amylovora
           ATCC 49946]
 gi|291198700|emb|CBJ45809.1| glutamate/aspartate ABC transporter, permease protein [Erwinia
           amylovora ATCC 49946]
 gi|291553032|emb|CBA20077.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia amylovora CFBP1430]
 gi|312171720|emb|CBX79978.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia amylovora ATCC BAA-2158]
          Length = 225

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI   + V GI+       + R    K       +Y
Sbjct: 1   MYQFDWSTIVPNLPWLWNGMVITLKITFTAIVFGIIWGTLL-AVMRLSSFKPLSWFAKIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPGFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGILSIARGQGNAALALGMTQWQSMQLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI    G  IE++L    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLLVSYLKKK 222



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 39/66 (59%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T  + F+ ++   I GTL+   RLS+ K ++W  ++YV +FR++P ++V+ +
Sbjct: 15  WLWNGMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPLSWFAKIYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLVVP 80


>gi|37524241|ref|NP_927585.1| hypothetical protein plu0221 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783664|emb|CAE12516.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 247

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 104/236 (44%), Gaps = 9/236 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +   N          D   +    + V+ ++    +  L                 
Sbjct: 1   MDFSVIAENWRYLLLGTFPDGPLEGAALTLVISLIAGTISIVLGTVAGIALAMLKGFWVN 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               + G    + +I L +  +F  PV+            PE  ++  AL+  T+A++A 
Sbjct: 61  LLAAVLGFFRAIPVIMLIFWTYFLLPVMLGMEI-------PEITTVVCALALITSAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V++G+IA+  GQ +A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  
Sbjct: 114 GVKAGIIAIGAGQWQAGLSLGFNRWQVLWYIVLPQALRMMVPSFINQWIALIKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG A+L  +   + N++     E+ L    IY  + + + L  N L  +  L+ +K
Sbjct: 174 VGVAELSFLATQVNNRSMVYPTEVFLFVALIYFVMCLALELTANYLVRRFTLQRRK 229


>gi|323526381|ref|YP_004228534.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323383383|gb|ADX55474.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 237

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 97/227 (42%), Gaps = 8/227 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
               ++ +   +S   +T+        F F + + L++   R+S + + +T      ++ 
Sbjct: 9   WRAFLYWDGHRISGLAVTLWLLVASLAFGFAMALPLAVA--RVSTNRYIRTP-----VHF 61

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T++  G P  V + L Y   +    +     I  +     F    +A S  T A+  EI
Sbjct: 62  YTYIFRGTPLYVQLLLIYTGIYSFEFIRS-REITDAIFRSGFYCAIMAFSLNTCAYTTEI 120

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
               + ++  G++EAA A G+      R +++P A+R  +P  +++ + +L  +S+A   
Sbjct: 121 FAGAMRSMSHGEVEAARAYGMDGITLYRRIIIPSALRRSLPLYSNEVILMLHATSVAFTA 180

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              D++ V     + T Q+ +   I   +YL++S+ +     R    
Sbjct: 181 TVPDILKVARDANSATYQSFQAFGIAALLYLTISLALVAIFRRAENH 227



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 2/101 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ +      Y  +FR  P  V +  +Y
Sbjct: 20  ISGLAVTLWLLVASLAFGFAMALPLAVARVSTNRYIRTPVHFYTYIFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             + S       S  +   +F +    +    +++T A   
Sbjct: 80  TGIYSFEF--IRSREITDAIFRSGFYCAIMAFSLNTCAYTT 118


>gi|295689851|ref|YP_003593544.1| polar amino acid ABC transporter inner membrane subunit
           [Caulobacter segnis ATCC 21756]
 gi|295431754|gb|ADG10926.1| polar amino acid ABC transporter, inner membrane subunit
           [Caulobacter segnis ATCC 21756]
          Length = 342

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 18/226 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                 L +   A   +F+  LG++L L     +R       + L   Y+ T      P 
Sbjct: 129 YWGGLALNLIVGAVCAIFALPLGVLLGL-----ARQSRLPLIRLLASAYVETA--RAAPL 181

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V++            +     +  +    +     +A++ + AA++AE VR GL+AVP+
Sbjct: 182 IVVLF--------AAAVLGPLLLPSALPLDKLGRAMVAITLFEAAYMAEAVRGGLMAVPQ 233

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALGL   +A   V+LPQA+R+  P L + ++ LLK++SL   +G  D+  V  
Sbjct: 234 GQREAARALGLGPLRALVDVVLPQALRTATPALVNSFIGLLKDTSLLYVIGVLDITGVLR 293

Query: 355 TIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             ++     G   E  +     +  L   ++     L  ++    +
Sbjct: 294 NAVSDFAWQGLEPEAYIFVGLSFWLLCFGLSRAAAALERRLQTAPR 339



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 64/203 (31%), Gaps = 11/203 (5%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A   G      +     I A  +G L+G  R S   L+  +   YVE  R  P +VV+F 
Sbjct: 128 AYWGGLALNLIVGAVCAIFALPLGVLLGLARQSRLPLIRLLASAYVETARAAPLIVVLFA 187

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF--------SFVLGIV 199
                  +LP       L   M       +           + V         +  LG +
Sbjct: 188 AAVLGPLLLPSALPLDKLGRAMVAITLFEAAYMAEAVRGGLMAVPQGQREAARALGLGPL 247

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
            +L    L +     T     L+     L+     L +I +       +  +  F + G 
Sbjct: 248 RALVDVVLPQALRTATP---ALVNSFIGLLKDTSLLYVIGVLDITGVLRNAVSDFAWQGL 304

Query: 260 STVSPEFMSLYIALSCYTAAFIA 282
              +  F+ L   L C+  +  A
Sbjct: 305 EPEAYIFVGLSFWLLCFGLSRAA 327


>gi|254713863|ref|ZP_05175674.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M644/93/1]
 gi|254717080|ref|ZP_05178891.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M13/05/1]
 gi|261218891|ref|ZP_05933172.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261321610|ref|ZP_05960807.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|260923980|gb|EEX90548.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261294300|gb|EEX97796.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
          Length = 385

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   +S    V     ++  +   + PL++     K + ++L   
Sbjct: 92  ACWAFVNAKYEQFLYGRYPISERWRVDLTALIFAAL---LVPLLIPKIPKKGLNAILFFL 148

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +V  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 149 VFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVLVLGRRSKLPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L +++I       L T++ +A      F  P               + +   I ++ +
Sbjct: 209 KTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +             ++   F++      ++ +   +  +
Sbjct: 319 DTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 378

Query: 392 IALKEKK 398
           +    K+
Sbjct: 379 LDTGHKR 385



 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLVLGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|213023865|ref|ZP_03338312.1| histidine transport system permease protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 177

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 75/174 (43%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T LI G+P LVL+ L +        +   +           ++  I L     A+  E 
Sbjct: 1   YTTLIRGVPDLVLMLLIFYGLQIALNVVTDSLGIDQIDIDPMVAGIITLGFIYGAYFTET 60

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVP+G +EAA A G TH +  R ++ P  MR  +P + + +  +LK ++L   +
Sbjct: 61  FRGAFMAVPKGHIEAATAFGFTHGQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLL 120

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D+V         T +     ++   IYL  + +    +  L  + ++  K+
Sbjct: 121 GLEDVVKATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKR 174


>gi|242241398|ref|YP_002989579.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242133455|gb|ACS87757.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 246

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 99/194 (51%), Gaps = 4/194 (2%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
               R     +    +  PLL    F  FG   L+   L   L  + P    F+F+   +
Sbjct: 55  WLPLRWLVVAYCALFRNTPLLVQLFFWYFGAGQLLPECLMQWL--NTPHTLLFSFLSWPS 112

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              EF++    L+ Y+AAFI+E VR+G+  V  GQ  AA ALGLTH +A R V+LPQA++
Sbjct: 113 F--EFLAGLFGLTLYSAAFISEEVRAGIAGVAGGQKYAACALGLTHWQAMRYVVLPQALK 170

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +PPL  QY+N++KNSSL +A+G A+L      +  +T +  +   +   +Y+++   +
Sbjct: 171 IALPPLLGQYMNIIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAVIACL 230

Query: 382 ALFMNRLNAKIALK 395
             +      +  +K
Sbjct: 231 EGWGMWRQHRQPIK 244



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 5/124 (4%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q IV +     Y   +  GF+ T  +A   ++ AT++G  + A R S    + W+   Y
Sbjct: 6   AQHIVEWLLAPQYLLWLWQGFLMTLGMAAGTVVLATLLGLALAAVRDSQWLPLRWLVVAY 65

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
             +FRN P LV +FF Y     +LP       L   +   +  L              +F
Sbjct: 66  CALFRNTPLLVQLFFWYFGAGQLLPE-----CLMQWLNTPHTLLFSFLSWPSFEFLAGLF 120

Query: 193 SFVL 196
              L
Sbjct: 121 GLTL 124


>gi|255617479|ref|XP_002539845.1| Nopaline transport system permease protein nocM, putative [Ricinus
           communis]
 gi|223501793|gb|EEF22538.1| Nopaline transport system permease protein nocM, putative [Ricinus
           communis]
          Length = 217

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 14/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + V SF+LG +L++     +R       +   L  I   +   +P ++ + L + 
Sbjct: 17  PWTIALTVVSFILGAILAVPLCC-ARTSTNAILRNGALSLI--LVCRSIPPILWLFLIF- 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F           F S  + L   TAA + EI R  + AVP GQ EAA AL
Sbjct: 73  ----------FGVGSELGSLSPFTSAVVGLGIITAANLCEIYRGAMKAVPVGQYEAAHAL 122

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    VL+PQ  R  +P L +  + LLK++++A  +G  DL      +  +T + 
Sbjct: 123 GLPTVRRYLDVLVPQIFRVSLPALATYAIGLLKDTAVASTIGVPDLALSANRVAQETFKG 182

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           IE+  ++  +Y  +SI IA     L+ ++ ++  +
Sbjct: 183 IEVYAVFGLVYFLISIAIAFATRGLDRRLRVRIAR 217


>gi|54309260|ref|YP_130280.1| arginine transporter permease subunit ArtM [Photobacterium
           profundum SS9]
 gi|46913692|emb|CAG20478.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum SS9]
          Length = 223

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 12/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++   + ++G  L+   T           +   L +IS+ +I 
Sbjct: 1   MNEQHVWQMLGGLATSLELTAVALLVGCTLAFLMT------LTLIMRTTGLHWISSGIIT 54

Query: 231 ---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G P LV I L Y        + + +F+      P F    +AL+  TAA+  ++ + 
Sbjct: 55  LFTGTPLLVQIFLIYYGPGQFEAIRE-SFLWNWLSQPWF-CAMLALALNTAAYSTQLFKG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
              A+P GQ +A  ALG+        VLLP A+R  IP  +++ + + K +SLA  +   
Sbjct: 113 AFNAIPSGQWQACRALGMDKFATL-RVLLPFAIRRAIPAYSNEVILVFKGTSLASTITIM 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+     I  QT   + +  I    YL+++ ++ L   ++  K
Sbjct: 172 DLMGYAQRINAQTYDTLVVFSIAGAFYLAVNGILTLIFRQVEKK 215


>gi|319784338|ref|YP_004143814.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170226|gb|ADV13764.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 385

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 24/267 (8%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P   +   L   VL ++        +     +         +T+  +      S  LGI
Sbjct: 136 VPRKGLNAVLLFFVLPIVAFVLLVGGMFGLPHVETSLWGGLLVTLSLSFVGIAVSLPLGI 195

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I T     L T VL      L    P    F+   
Sbjct: 196 VLAL-----GRRSKMPIIKTLCVVFIETVRGIPLIT-VLFFASVMLPLFLPEGVSFD--- 246

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 +F+   I +S + AA++AE+VR GL A+P+GQ E A +LGL + +    +++PQ
Sbjct: 247 ------KFLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMYFIVMPQ 300

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-------GGTIINQTGQAIEIILIWM 371
           A++ +IP + + ++ + K++SL + +   DL+ +             QT ++   ++   
Sbjct: 301 ALKLVIPGIVNTFIGMFKDTSLVIIISMFDLLGIVKQNFSDANWATAQTARS--GLIFAA 358

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
           F++      ++ +      ++    K+
Sbjct: 359 FVFWLFCFGMSRYSMYTERRLDTGHKR 385



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 38/79 (48%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T++  G + T  L+F G+  +  +G ++  GR S   ++  +C V++E  R IP + V+F
Sbjct: 170 TSLWGGLLVTLSLSFVGIAVSLPLGIVLALGRRSKMPIIKTLCVVFIETVRGIPLITVLF 229

Query: 147 FLYKSVLSVLPIPDHSIVL 165
           F    +   LP        
Sbjct: 230 FASVMLPLFLPEGVSFDKF 248


>gi|218678695|ref|ZP_03526592.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 219

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I + + + G VL +F   L+  +     + L   Y    +I G P LVL+   Y +
Sbjct: 22  VTVSISLLAILAGSVLGVFVG-LALVYGGVVLRLLVRAYTD--IIRGTPVLVLVLASYYV 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G  + P F +  +AL+ + ++ + EIVR  L A+P+GQ EAA A+G
Sbjct: 79  SAAV----------GLDLGP-FSAGVLALAVFCSSHVGEIVRGALQAIPKGQTEAAKAIG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    VL PQ MR  +P   +    ++K S+L   +G A+L+     II++   ++
Sbjct: 128 LTFTQTFTSVLWPQDMRQCLPAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   +   +Y  ++  I  F   +  K AL
Sbjct: 188 QFYFLAGGLYFIVNYGIEHFGKYVERKTAL 217



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 31/68 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I+ G   T  ++   ++  +++G  VG   +    ++  + R Y ++ R  P LV++  
Sbjct: 15  VIINGIGVTVSISLLAILAGSVLGVFVGLALVYGGVVLRLLVRAYTDIIRGTPVLVLVLA 74

Query: 148 LYKSVLSV 155
            Y    +V
Sbjct: 75  SYYVSAAV 82


>gi|119961590|ref|YP_946400.1| amino acid ABC transporter permease [Arthrobacter aurescens TC1]
 gi|119948449|gb|ABM07360.1| putative amino acid ABC transporter, permease protein,
           His/Glu/Gln/Arg/opine family [Arthrobacter aurescens
           TC1]
          Length = 262

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 17/238 (7%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L         N  I   +  +  V+      +      K  +    +Y  
Sbjct: 11  FFDFDAMVEVLPQLLGVGLLNTLIISIAATILGVVMGMVVAVMGISRSKWLRIPARIYTD 70

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEI 284
            F   GLP ++ I L  Q          F  +  S   P  +    IALS   +A+I EI
Sbjct: 71  LF--RGLPAILTILLIGQ---------GFARLSQSVFGPSPYPLGIIALSLIASAYIGEI 119

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ +V +GQ EA  ALG+++ K+  LV++PQ +R ++P L +Q++ ++K+SSL   +
Sbjct: 120 FRAGIQSVDKGQGEACRALGMSYSKSMALVVVPQGIRRVLPALVNQFIAIVKDSSLVYFL 179

Query: 345 GFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G      +L  VG      +G  +  +++    YL +++ +   +N  + K     ++
Sbjct: 180 GLLVSERELFRVGQDAAVLSGN-LSPLVMAGIFYLIITVPLTHLVNYFDNKFRTGRRR 236



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 72  IDQGIVPYTSDSSYATAIL-VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           I +    + +       +L VG +NT  ++ +  I   ++G +V    +S +K +    R
Sbjct: 7   ISRTFFDFDAMVEVLPQLLGVGLLNTLIISIAATILGVVMGMVVAVMGISRSKWLRIPAR 66

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           +Y ++FR +P ++ I  + +    +          P G+ 
Sbjct: 67  IYTDLFRGLPAILTILLIGQGFARLSQSVFGPSPYPLGII 106


>gi|33596591|ref|NP_884234.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis 12822]
 gi|33573292|emb|CAE37273.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella parapertussis]
          Length = 213

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               +A   +Y+  F   G   LV +   +  +F  P+             P  +   + 
Sbjct: 44  SPWLRAPAAVYVEVF--RGTSALVRL---FWFYFVLPMF--------GMKLPALLVGIVV 90

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L     A+ AE+VR  ++AVP GQ EAA+AL LT  +    ++LPQA+ +++PP  +  +
Sbjct: 91  LGANAGAYGAEVVRGAILAVPAGQREAAVALNLTRARTIWRIILPQAVPAMLPPTGNLLI 150

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            LLKN++L   +   DL   G  + ++T +  EI  + + +Y +++++I   +  L  + 
Sbjct: 151 ELLKNTALVSLITITDLTFRGQLLRSETLRTTEIFTLVLLLYFAVALVITGGIRMLERRF 210

Query: 393 ALK 395
            ++
Sbjct: 211 KVR 213


>gi|126652698|ref|ZP_01724859.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905]
 gi|126590547|gb|EAZ84665.1| amino acid ABC transporter, permease protein [Bacillus sp. B14905]
          Length = 235

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 17/220 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVL 237
                  +   V+GI+++    +         +F+    +  P++     + FGLP LV 
Sbjct: 24  FMTFTPVLLGIVIGILIAFVRIKQIIFLTPFLNFYVSFFRGTPIIMHIMLVYFGLPMLVD 83

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +           V   F+    S+  P    + +AL+    A+ +EI+RSG+++VP+GQ+
Sbjct: 84  V-----------VANTFHLSFQSSSIPILFFVILALTFSAGAYSSEIIRSGILSVPKGQL 132

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A+GLT  +A R  +LPQA    IP  T+ ++  L  +SLA  +   +L  V   + 
Sbjct: 133 EAAYAIGLTFTQAMRRYILPQAFGKSIPNFTNVFIGFLHATSLAFFLSIKELTGVANIVA 192

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   + +E  +    IY  +SI+     +R+  ++    K
Sbjct: 193 SVNLKFLEAFIAVGIIYWGISIITEWISHRIEKRVTAYSK 232


>gi|222102076|ref|YP_002546666.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84]
 gi|221728193|gb|ACM31202.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84]
          Length = 218

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 17/217 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+   A   +   +LG ++ +      R +  K    +  +YI   LI G P +
Sbjct: 16  LRGAAVTVMVAAASLLAGMILGTIIGVI-----RTYAPKYISLIAQIYIG--LIRGTPMV 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I   Y   F  P L                +  IAL+  ++A++AEIVR G +AVP G
Sbjct: 69  VQIMFIY---FALPSLLDIKL-------TALTAGMIALTVNSSAYLAEIVRGGFMAVPHG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
             EA +A+GL   +    ++ P A R ++P L +Q++  LK++SL + +G A+L   G  
Sbjct: 119 LREAGLAMGLPLHRVLLYIIGPVAFRRMVPALGNQFIIGLKDTSLLIVIGVAELTRTGQE 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I+ +  +A+EI      IYL +  ++A+    +  +I
Sbjct: 179 IMTENYRAVEIWAAVGVIYLVIISIMAIIFRVIEKRI 215



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 78/201 (38%), Gaps = 7/201 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  +A + ++   I+GT++G  R  A K ++ I ++Y+ + R  P +V I F
Sbjct: 14  ALLRGAAVTVMVAAASLLAGMILGTIIGVIRTYAPKYISLIAQIYIGLIRGTPMVVQIMF 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +Y ++ S+L I   ++         N       +       +       G+ + L   R+
Sbjct: 74  IYFALPSLLDIKLTALTAGMIALTVNSSAYLAEIVRGGFMAVPHGLREAGLAMGLPLHRV 133

Query: 208 SRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             +        + +P L     +     +L+++    +L      +   N+      + E
Sbjct: 134 LLYIIGPVAFRRMVPALGNQFIIGLKDTSLLIVIGVAELTRTGQEIMTENY-----RAVE 188

Query: 266 FMSLYIALSCYTAAFIAEIVR 286
             +    +     + +A I R
Sbjct: 189 IWAAVGVIYLVIISIMAIIFR 209


>gi|311106206|ref|YP_003979059.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 8 [Achromobacter
           xylosoxidans A8]
 gi|310760895|gb|ADP16344.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 8
           [Achromobacter xylosoxidans A8]
          Length = 269

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 11/222 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            +        +  N +I V +  LG +  L    LS        + L   Y+  F    +
Sbjct: 52  WQWSPALLRGLAMNIQISVLAMALGTLAGLVVGALS-LSPSPLLRRLTRAYVLLFRNAPI 110

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV     Y   +  P   +    G +   P+++ + I L    +A +AEI R  + ++
Sbjct: 111 LVLV-----YFTTYVFPF--ELRLGGWNLPFPDWIKVVIGLGLPASANVAEIFRGAIQSI 163

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-- 350
           P  Q EAA +L     +  R+++LPQ +R ++P   + Y ++  ++SLA  VG  DLV  
Sbjct: 164 PSAQWEAAQSLAFRRSQIFRMIVLPQCLRRMLPSWMNLYASITMSTSLASLVGVHDLVDA 223

Query: 351 -SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +V    +++T   I +    + ++ +    IA +   L  +
Sbjct: 224 ATVASNTVSRTDFTILVYFTLLALFFAYCYPIARWTRYLERR 265



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 42/87 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             ++ A+L G      ++   M   T+ G +VGA  LS + L+  + R YV +FRN P L
Sbjct: 52  WQWSPALLRGLAMNIQISVLAMALGTLAGLVVGALSLSPSPLLRRLTRAYVLLFRNAPIL 111

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V+++F        L +   ++  P  +
Sbjct: 112 VLVYFTTYVFPFELRLGGWNLPFPDWI 138


>gi|302522780|ref|ZP_07275122.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|318059837|ref|ZP_07978560.1| putative glutamate ABC transporter permease protein [Streptomyces
           sp. SA3_actG]
 gi|318077306|ref|ZP_07984638.1| putative glutamate ABC transporter permease protein [Streptomyces
           sp. SA3_actF]
 gi|302431675|gb|EFL03491.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 298

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 7/158 (4%)

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                PVL    F+  +       +L   L+ Y  + +AE+ RSG+ +V RGQ EAA AL
Sbjct: 119 FFRAMPVLVMIFFVFIALKVQPLPALVTGLTLYNGSVLAEVFRSGIASVDRGQREAAYAL 178

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +    +L+PQA+R+++P + SQ +  LK++SL   + + + +  G  I +     
Sbjct: 179 GMRKTQVMAYILIPQAVRAMLPSIISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYD 238

Query: 364 IEIILIWMFI---YLSLSIMIALFMNRLNAKIALKEKK 398
           +  I + M I   Y+ + ++++     L    A +E++
Sbjct: 239 LPFIPVVMVISPVYIGMCMLLSWLAQGL----ARRERR 272



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/64 (39%), Positives = 37/64 (57%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT        + A  +GTL+  GRLS ++LV W     VE FR +P LV+IFF+
Sbjct: 73  LLRGLGNTLKAFAISAVLALALGTLLAVGRLSEHRLVRWPATALVEFFRAMPVLVMIFFV 132

Query: 149 YKSV 152
           + ++
Sbjct: 133 FIAL 136


>gi|302023524|ref|ZP_07248735.1| amino acid ABC transporter permease protein [Streptococcus suis
           05HAS68]
          Length = 174

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 12/176 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL+    ++ G P L+ +   Y +                 +     ++ +A +   AA+
Sbjct: 11  LLHFYVLIMRGTPLLLQLIFVYYV-----------LPSVGIIFDRMPAVILAFTLNYAAY 59

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI R G+ A+P+GQ EAA  L  T  +  R ++LPQ ++ ++P + ++ + L+K++SL
Sbjct: 60  FSEIFRGGIEAIPKGQYEAAKVLKFTPVQTIRYIVLPQVVKIVLPSVFNEVMTLVKDTSL 119

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             A+G +DL+    T  N+      +  I   IYL +   + L   ++  K     
Sbjct: 120 VYALGVSDLLLASRTAANRDASLAPMF-IAGAIYLLMIGAVTLISKQVEKKFDYYR 174


>gi|329770549|ref|ZP_08261927.1| hypothetical protein HMPREF0433_01691 [Gemella sanguinis M325]
 gi|328836298|gb|EGF85967.1| hypothetical protein HMPREF0433_01691 [Gemella sanguinis M325]
          Length = 214

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 105/233 (45%), Gaps = 19/233 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+   +T++    + + S  LGI+++         F+         +YI
Sbjct: 1   MEYLIEILPSLLNGTLITLEVFFLVLILSIPLGIIIAFIM-----RFNITILNYFINIYI 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                       +  IA +   AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFIYYV-----------LPTVGVRFDRLPAAIIAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++P+GQ EAA  L     +  R ++LPQ ++ ++P + ++ ++L+K++SL  A+
Sbjct: 103 FRGGINSIPKGQYEAAKVLKFNQFQTIRFIILPQVIKIVLPSVFNEIMSLVKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           G +DL+    T  N+    + +  +   IYL L  ++ +   R+  +     +
Sbjct: 163 GISDLILASRTAANRDASLLPMF-VAGMIYLILIGIVTVVSKRVEKRYNYDRR 214


>gi|239833798|ref|ZP_04682126.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821861|gb|EEQ93430.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 218

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 1/204 (0%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            + G+  +L     S       G A  LL +    +   P    I L         +   
Sbjct: 15  LMTGVWWTLIIAVSSSIVSFFGGIAFALLVLYGNWLVRYPVRFFIWLFMGTPLLLQLFLL 74

Query: 254 FNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +  +    ++ P   +  I L  + A + +++ R+ ++ V  GQ E A +LG    +  R
Sbjct: 75  YYGLSQIGINIPAVWTGVIGLGLHFAVYNSDLFRTAILTVDPGQNEGARSLGFGSGQTLR 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +++PQA+R+ +P + +  + LLK+++L   +G  +LV      I++T    E  +    
Sbjct: 135 YIIVPQAVRNALPQVGNNLIALLKDTALVSVIGITELVHASQQAISETYSPFEFYITAAV 194

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           I+  L++++   ++ +  K+    
Sbjct: 195 IFYVLNLILEAGLHWMEKKVEAYR 218



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 35/93 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   ++ G   T  +A S  I +   G       L  N LV +  R ++ +F
Sbjct: 3   LDFSIVPPYTELLMTGVWWTLIIAVSSSIVSFFGGIAFALLVLYGNWLVRYPVRFFIWLF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
              P L+ +F LY  +  +            G+
Sbjct: 63  MGTPLLLQLFLLYYGLSQIGINIPAVWTGVIGL 95


>gi|167837295|ref|ZP_02464178.1| histidine transport system permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 237

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  +G V ++    ++R   ++        Y  T++  G P  V + L Y  
Sbjct: 25  VTLWLLVASIAIGFVCAVPL-AVARVSKKRWLSTPVRFY--TYVFRGTPLYVQLLLIYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +    F+  +     F    +A +  T A+  EI    + A+  G++EAA A G
Sbjct: 82  MYSLAFVRDHAFLD-AFFRSGFNCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R V+LP ++R  +P  +++ + +L  +++A      D++ V     + T  A 
Sbjct: 141 MGPFTMYRRVILPSSLRRALPLYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   IYL++S  +     R    
Sbjct: 201 QSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    +    +   R+S  + ++   R Y  VFR  P  V +  +Y
Sbjct: 20  VSGLAVTLWLLVASIAIGFVCAVPLAVARVSKKRWLSTPVRFYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             + S+  + DH+ +  F 
Sbjct: 80  TGMYSLAFVRDHAFLDAFF 98


>gi|313885720|ref|ZP_07819469.1| putative glutamine ABC transporter, permease protein GlnM
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619085|gb|EFR30525.1| putative glutamine ABC transporter, permease protein GlnM
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 216

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 18/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +++ L+    T+  +A   + SFV+GI +++      +  H K    +  +YI  F   
Sbjct: 8   FSDQFLAGFGHTLLASAIALIASFVIGISMAV-----GQTSHNKLLSTITTIYIEVF--R 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P LV++   Y +                     + +  I LS YT++F+A++V+SG+ 
Sbjct: 61  NIPLLVIVMFFYVVVPLY-----------GIKVTGYQAGIIGLSLYTSSFVADVVKSGIT 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EA  A GL+  + T  ++LPQA+  ++P L +Q +NL+KNSS+   V   D++
Sbjct: 110 SIPKGQKEAGFASGLSQSQVTFHIVLPQAINLVLPTLGNQIINLVKNSSILAMVAGLDIM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  I +Q+       +I    YL ++I ++L +     + A   +
Sbjct: 170 YQGDLIASQSFNVFSTYIIVGLFYLLITIPLSLMVKHWENQQAKMAR 216



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 45/94 (47%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +++   L GF +T   +   +I + +IG  +  G+ S NKL++ I  +Y+EVFRNIP L
Sbjct: 6   QNFSDQFLAGFGHTLLASAIALIASFVIGISMAVGQTSHNKLLSTITTIYIEVFRNIPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           V++ F Y  V               G+ L     
Sbjct: 66  VIVMFFYVVVPLYGIKVTGYQAGIIGLSLYTSSF 99


>gi|261407769|ref|YP_003244010.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261284232|gb|ACX66203.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 219

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 14/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + + + +    L     T+       + S  LG V +L      +          PL 
Sbjct: 1   MSMDYIVQIGKPMLEGAQTTILLFLISILASIPLGFVFTLMVRSAIK----------PLA 50

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +++   I+      L+       F  PVL     IG   V   F++  +A     AA+ A
Sbjct: 51  WLANAYIYVFRGTPLLLQLLFFCFGLPVL---PVIGEYLVLDRFVAACLAFVLNYAAYFA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL+A+ +GQ EA+  LGL   + T  V+LPQ  R  +P ++++ + L+K+++L  
Sbjct: 108 EIFRGGLLAIDKGQYEASKVLGLNRWQTTTKVILPQMFRVALPAVSNESITLVKDTALLY 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           AV   +L+    T +N+    I   +I   IYL +++++ L    L  +  
Sbjct: 168 AVAVPELLHFAYTAVNRD-VTIMPFVIAGVIYLLMTLVLTLLFKFLERRFK 217


>gi|315285930|gb|EFU45368.1| arginine/ornithine transport protein [Escherichia coli MS 110-3]
          Length = 228

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  +  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFIERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|148926584|ref|ZP_01810266.1| putative amino acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145845278|gb|EDK22372.1| putative amino acid ABC tansporter permease protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 181

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 95/199 (47%), Gaps = 22/199 (11%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            ++G  L++           KT   +   YI   +I G P ++ + +   + F       
Sbjct: 1   MIIGFSLAILHF-----SKFKTLNFIIDEYID--IIRGTPVILQLMIFAFVIF------- 46

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                  T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + 
Sbjct: 47  -------TFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKE 99

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQA ++I+P L +++++L K +S+   +   D+     ++        + I+    +
Sbjct: 100 IILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLV 158

Query: 374 YLSLSIMIALFMNRLNAKI 392
           Y     + + F  +L  ++
Sbjct: 159 YYVSVKIFSYFAKKLELRM 177


>gi|331702001|ref|YP_004398960.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329129344|gb|AEB73897.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 221

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 19/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R +         +  +   SF+L ++L LF T L++  H K        +IS   + G+
Sbjct: 19  FRSIPRILAGFPMSIGLTAISFILSLILGLFLT-LAQLSHHKLLHYPARAFISF--MRGV 75

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+ + Y                         +  IA +   +AF++E+ RS   AV
Sbjct: 76  PMLVLLFIIYFGFRA----------------DALPAAVIAFTINCSAFVSEVYRSSFSAV 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA +LGL +RK    ++ PQA R  IP L +  L+L K +SLA  +  +++   
Sbjct: 120 DHGQWEAAYSLGLPYRKVISKIVFPQAFRIAIPALGNILLDLFKGTSLAAMITVSEMFMD 179

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +       + I +    +Y     ++ +   +L  ++A 
Sbjct: 180 AQIVAGANQDYMTIYITIAVVYWFFCWLMTIGQTQLERELAR 221



 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL GF  +  L     I + I+G  +   +LS +KL+ +  R ++   R +P LV++F +
Sbjct: 25  ILAGFPMSIGLTAISFILSLILGLFLTLAQLSHHKLLHYPARAFISFMRGVPMLVLLFII 84

Query: 149 YKSV 152
           Y   
Sbjct: 85  YFGF 88


>gi|255326957|ref|ZP_05368033.1| glutamate transporter permease protein GluD [Rothia mucilaginosa
           ATCC 25296]
 gi|255296174|gb|EET75515.1| glutamate transporter permease protein GluD [Rothia mucilaginosa
           ATCC 25296]
          Length = 312

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 116/254 (45%), Gaps = 15/254 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L  ++ L           +    L      ++  L     T+   A   V S   G+V  
Sbjct: 42  LFAVYVLTVMGQKGQLEAEKWTDLFTARAWSSYYLPGLASTLSAAAVSVVTSVAFGVVFG 101

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +     +R    +  +    + +  F       ++++ + + L   K       + G   
Sbjct: 102 I-----ARLSQYRVIRWFGTVVVEFFRAVP---VLIMMIFFWLFLGK-------YSGLPP 146

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F+++ I L+ Y  + IAE++RSG+  +PRGQ EA +A+GLT  +    +LLPQA  
Sbjct: 147 AQLPFIAVVIGLTLYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPTQTLIRILLPQAFT 206

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++P + SQ++ +LK+++L   + + +L++    I +  G  ++ +++   ++++++ ++
Sbjct: 207 AMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQTLILAAALFVTVNFVL 266

Query: 382 ALFMNRLNAKIALK 395
                 +  ++A +
Sbjct: 267 TAVATGITDRLASR 280



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            +      +  ++++  L G  +T   A   ++ +   G + G  RLS  +++ W   V 
Sbjct: 59  AEKWTDLFTARAWSSYYLPGLASTLSAAAVSVVTSVAFGVVFGIARLSQYRVIRWFGTVV 118

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           VE FR +P L+++ F +  +     +P   +  
Sbjct: 119 VEFFRAVPVLIMMIFFWLFLGKYSGLPPAQLPF 151


>gi|269121061|ref|YP_003309238.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614939|gb|ACZ09307.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 239

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 80/156 (51%), Gaps = 3/156 (1%)

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           +   +     +L    FI    V  +F+   I     ++A+++EI+RSG+ ++ +GQMEA
Sbjct: 84  ILRGIPVTIQLLIFAYFILSGVVQSKFLIAVIGFGINSSAYVSEIIRSGIESLDKGQMEA 143

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV--AVGFADLVSVGGTII 357
           A ALG+ +  +   +++PQA+R+I+P L ++++ L K +S+     +   DL      + 
Sbjct: 144 ARALGMPYSMSMFEIIIPQAVRNILPALINEFIALFKETSVVGLVLINMYDLTFASKALQ 203

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++  +  E  ++   IY     + ++F   L  K+ 
Sbjct: 204 SKYYKP-EPYILAGIIYYICVKLFSIFAGTLERKLK 238


>gi|257056749|ref|YP_003134581.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586621|gb|ACU97754.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 287

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 110/267 (41%), Gaps = 22/267 (8%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
            ++  +  L +   +   V            +   +      L       +T  K F  +
Sbjct: 18  RLYAVVGVLAIAAVIGYVVYKFAEAGQFDADIWEWVLYKQIQLEVLAALGNT-VKAFATA 76

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            VL +V        +R       +   +L +  F    L  ++                 
Sbjct: 77  AVLALVFG-AIFATARLSDYAVIRVPAMLVVEFFRAVPLVVMI----------------- 118

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F F  G  +   F S+ + L+ Y  A +AE+ R+G++++P+GQ EAA A+G+   +  RL
Sbjct: 119 FFFHYGLALGAPFYSVVLGLTLYNGAVLAEVFRAGILSLPKGQSEAAYAIGMRKSQVMRL 178

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIW 370
           VLLPQA+R+++P + SQ + LLK+++L   + + +L+     + +        I I ++ 
Sbjct: 179 VLLPQALRAMMPAIISQLVVLLKDTALGFLITYEELLLYARYLGSMLEFDRPLIPITIVV 238

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             +Y+ + + +      L  +    +K
Sbjct: 239 GAMYIIMCLALTGVAKWLETRNRRSKK 265



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 18/137 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            RV +    ++  L +  +  + V                   +E   F+ D     +  
Sbjct: 13  SRVRHRLYAVVGVLAIAAVIGYVVYK----------------FAEAGQFDADIW--EWVL 54

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L    NT     +  + A + G +    RLS   ++     + VE FR +P 
Sbjct: 55  YKQIQLEVLAALGNTVKAFATAAVLALVFGAIFATARLSDYAVIRVPAMLVVEFFRAVPL 114

Query: 142 LVVIFFLYKSVLSVLPI 158
           +V+IFF +  +    P 
Sbjct: 115 VVMIFFFHYGLALGAPF 131


>gi|213022067|ref|ZP_03336514.1| arginine transporter permease subunit ArtQ [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 124

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 66/122 (54%)

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ ++ +R  L AVP GQ E+  ALGL+       +++PQ  R  +P L +Q+L LLK
Sbjct: 1   YAAYASQTLRGALKAVPSGQWESGQALGLSKTAIFFRLVMPQMWRHALPGLGNQWLVLLK 60

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++L   +   DL+    +I  +T +     +I   IYL ++++    + R++ +    E
Sbjct: 61  DTALVSLISVNDLMLQTKSIATRTQEPFNWYIIAAAIYLVITLISQYILKRIDLRATRFE 120

Query: 397 KK 398
           ++
Sbjct: 121 RR 122


>gi|331015650|gb|EGH95706.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 185

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 6/189 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R    K    +   Y++ F      ++ L+ +    +   P + ++   G  T    
Sbjct: 3   ALMRLSSNKLLANVAGAYVNYFR-----SIPLLLVITWFYLAVPFVLRW-ITGEDTPIGA 56

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG+ + +  RL++LPQA R + P
Sbjct: 57  FASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLIILPQAFRKMTP 116

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L  Q + L +++SL   VG  D ++   +  +  G+A E ++I   +Y ++S   +L +
Sbjct: 117 LLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVYFTISFAASLLV 176

Query: 386 NRLNAKIAL 394
            RL  + A+
Sbjct: 177 KRLQKRFAV 185



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 29/75 (38%)

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++   RLS+NKL+A +   YV  FR+IP L+VI + Y +V  VL                
Sbjct: 1   MLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWFYLAVPFVLRWITGEDTPIGAFASC 60

Query: 173 NRGLSFPTLTMDTNA 187
                          
Sbjct: 61  VVAFMMFEAAYFCEI 75


>gi|218463669|ref|ZP_03503760.1| octopine ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 199

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 1/161 (0%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F+  G P LV + L Y          Q   + G    P +    +AL+  TAA+ +EI
Sbjct: 23  YVFVFRGSPLLVQMFLIYYGLGQFRHELQDLGLWGFFREP-YWCAVLALTLNTAAYCSEI 81

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL AV   ++EAA A G++     R ++LP A+R  +P   ++ + ++K ++LA  +
Sbjct: 82  FRGGLQAVSVQEIEAARACGMSGVLLFRRIILPIAIRHALPAYGNEIILMIKATALASVI 141

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              ++  + G +I  + +A EI ++   IYL++  ++   +
Sbjct: 142 TIMEVTGLAGKLIADSFRAFEIFIVAGAIYLAIIFVVTRML 182


>gi|28869963|ref|NP_792582.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853208|gb|AAO56277.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 220

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    + V G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWAAREVLWAGFLTSIQCSALAIVAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL      + +  P L              F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVL-----AVFYMVPAL--------GWHISAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+PRGQ+EA  A+GL   +  R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPRGQIEAGKAIGLRFNQTLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L    +  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRHIEKRVAL 219



 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP--PLVVI 145
            +  GF+ +   +   ++  T+IG L G              R+YV++ R  P   LV+ 
Sbjct: 17  VLWAGFLTSIQCSALAIVAGTLIGMLAGLVLTYGGFFARLPIRLYVDLIRGTPVFVLVLA 76

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMF 170
            F     L        +  +   +F
Sbjct: 77  VFYMVPALGWHISAFQAGAIGLTLF 101


>gi|220925011|ref|YP_002500313.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219949618|gb|ACL60010.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 238

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L     F+  G P LV + L Y          Q   +      P + +L +ALS  T A+
Sbjct: 53  LARGYIFVFRGTPLLVQLFLIYYGLGQFRYGLQALGLWWFFREPYWCAL-LALSLNTGAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI R G++AVP G + A  A G++     R V LP A R  +P   ++ ++++K ++L
Sbjct: 112 TAEIFRGGVLAVPHGALLAGRACGMSRLTLLRRVTLPLAARQALPAYGNEIISVVKATAL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +L  +   +I Q+ +A+EI L     YL++   I + +    A ++
Sbjct: 172 ASTITILELTGIAQKLIAQSFRALEIFLCAAAFYLAIVSAIIVLVRLAEAWLS 224


>gi|325521709|gb|EGD00466.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. TJI49]
          Length = 157

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 65/141 (46%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   F++  + L     A+  E  R   ++VPRGQ+EA  A G+T+ +    ++ P
Sbjct: 14  WDQIDIDPFLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTNWQVFTRIMFP 73

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q MR  +P + + +  L+K ++L   +G AD+V         T +     LI   +YL++
Sbjct: 74  QMMRFALPGIGNNWQVLVKATALVSIIGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAI 133

Query: 378 SIMIALFMNRLNAKIALKEKK 398
           + +    +  L  + +   +K
Sbjct: 134 TTISNFVLMWLEKRYSTGVRK 154


>gi|313890158|ref|ZP_07823793.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121519|gb|EFR44623.1| putative arginine ABC transporter, permease protein ArtQ
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 213

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + + S  LG +L+            K  + L  LY+  +++ G P L
Sbjct: 12  LDGAKVTLQVFFIVIMLSIPLGALLAFLM-----KLPFKPLQWLLTLYV--WIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGITFDRMPAAILAFTMNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L H +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLRLNHLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +    +  K 
Sbjct: 174 AANRDA-TLAPMFIAGMIYLLLIGLVTILSRHIEKKF 209



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  ++ +  +G L+        K + W+  +YV + R  P L+ + F 
Sbjct: 11  LLDGAKVTLQVFFIVIMLSIPLGALLAFLMKLPFKPLQWLLTLYVWIMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D          +N              A 
Sbjct: 71  YYVLPSVGITFDRMPAAILAFTMNYAAYFAEIFRGGIEAI 110


>gi|116750585|ref|YP_847272.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699649|gb|ABK18837.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 240

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 109/233 (46%), Gaps = 3/233 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                + +   +         + T   + + ++ + + + + A  L R    +  + +  
Sbjct: 3   HYDFDWSVLWRHPYGKMLLQGVWTTVHLSLLAWAIALPVGV-AIALCRIMPCRAARLVGG 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+ T  +  +P LV +   Y             ++  +     ++   +AL  YTAA +
Sbjct: 62  AYVET--LRNIPLLVQLFFWYFAVPSLLPGKTERWLYANVRDLSYVLGVLALGTYTAARV 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VRSGL+AVP GQ  AA++ GL+     R V+LP A+R +IP L++++L   KNSSLA
Sbjct: 120 AEAVRSGLLAVPAGQFRAALSTGLSPAGTYRHVILPYALRVVIPLLSTEFLTCFKNSSLA 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + +G  +   +   I + T   +E       +YL  S+ + + M R+ +K+ +
Sbjct: 180 MTIGVMETTGMANYIDSFTFHGLETTTAASLVYLLTSLSVIVLMGRIESKMRI 232



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 35/82 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G   T  L+      A  +G  +   R+   +    +   YVE  RNIP LV
Sbjct: 15  PYGKMLLQGVWTTVHLSLLAWAIALPVGVAIALCRIMPCRAARLVGGAYVETLRNIPLLV 74

Query: 144 VIFFLYKSVLSVLPIPDHSIVL 165
            +FF Y +V S+LP      + 
Sbjct: 75  QLFFWYFAVPSLLPGKTERWLY 96


>gi|300931334|ref|ZP_07146666.1| arginine/ornithine transport protein [Escherichia coli MS 187-1]
 gi|331653751|ref|ZP_08354752.1| histidine transport system permease protein HisQ [Escherichia coli
           M718]
 gi|300460839|gb|EFK24332.1| arginine/ornithine transport protein [Escherichia coli MS 187-1]
 gi|331048600|gb|EGI20676.1| histidine transport system permease protein HisQ [Escherichia coli
           M718]
          Length = 228

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +    ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFLRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|256369177|ref|YP_003106685.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|255999337|gb|ACU47736.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
          Length = 385

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L+  V  V+             ++         +T+  +      S  LGI
Sbjct: 136 IPKKGLNAILFFLVFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGI 195

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+       R       K L +++I       L T++ +A      F  P         
Sbjct: 196 VLAF-----GRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP--------- 241

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 + +   I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQ
Sbjct: 242 -GVTFDKLLRALIGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQ 300

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +     +             ++   F+
Sbjct: 301 ALKLVIPGIVNTFIGLFKDTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFV 360

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +   +  ++    K+
Sbjct: 361 FWIFCFAMSRYSIFMERRLDTGHKR 385



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLAFGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|238920804|ref|YP_002934319.1| polar amino acid ABC transporter, inner membrane subunit
           [Edwardsiella ictaluri 93-146]
 gi|238870373|gb|ACR70084.1| polar amino acid ABC transporter, inner membrane subunit
           [Edwardsiella ictaluri 93-146]
          Length = 246

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 9/235 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G        S   +T+  +   +V +FVLG +L +      R    +    +  
Sbjct: 12  QPAPFGGTTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGIL-----RTLPSRPLAMIGA 66

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAA 279
           +Y+  F    +P +V     Y +  +       N+  G        F+S  + L  +TAA
Sbjct: 67  IYVELF--RNVPLIVQFFTWYLVVPELLPTDWGNWFKGELDPSIQFFVSSLLCLGLFTAA 124

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            I E VR+ + ++P GQ  A +A+G T  +  R VLLP A R I+PPLTS+ LNL+KNS+
Sbjct: 125 RICEQVRAAIQSLPAGQRSAGLAMGFTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSA 184

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +A  +G  D+ +  G +++ +  A E        Y++++ ++ L M+ L   + L
Sbjct: 185 IASTIGLMDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGMHLLERHLQL 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F            ++Y   I  G   T  L+ +  + A ++G+L+G 
Sbjct: 3   IDWNWGIFLQPAPFG----------GTTYLGWIWSGMQVTIALSLAAWVIAFVLGSLLGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   ++ +A I  +YVE+FRN+P +V  F  Y  V  +LP    + 
Sbjct: 53  LRTLPSRPLAMIGAIYVELFRNVPLIVQFFTWYLVVPELLPTDWGNW 99


>gi|213022525|ref|ZP_03336972.1| putative ABC transporter membrane protein [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 109

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 61/107 (57%)

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           + +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA  +   +L  
Sbjct: 1   IDKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFR 60

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I ++T +   + L    IY  ++ +++   N    ++  +E++
Sbjct: 61  QAQLITSRTLEVFTMYLAASLIYWVMATVLSALQNYFENQLNRQERE 107


>gi|163843016|ref|YP_001627420.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163673739|gb|ABY37850.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 385

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A+   + A     L G   +S    V     ++  +   + PL++     K + ++L   
Sbjct: 92  AYWAFVNAKYEQFLYGRYPISERWRVDLTALIFAAL---LVPLLIPKIPKKGLNAILFFL 148

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +V  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 149 VFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L + +I       L T++ +A      F  P               + +   I ++ +
Sbjct: 209 KTLSISFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +             ++   F++      ++ +   +  +
Sbjct: 319 DTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 378

Query: 392 IALKEKK 398
           +    K+
Sbjct: 379 LDTGHKR 385



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +   ++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSISFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|145298730|ref|YP_001141571.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851502|gb|ABO89823.1| ABC-type amino acid transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 300

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/159 (35%), Positives = 86/159 (54%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L    L   L        Q   +G        +S  + +   +AAF+AEIVR+GL AV
Sbjct: 138 QLLPASGLSRWLGTLSLSPWQEALLGPPARWENLISGTLCVGMISAAFVAEIVRAGLAAV 197

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA +LGL+ R   R V+LPQAM  ++PPLT Q + L+K++++   +   +L  V
Sbjct: 198 PKGQWEAAQSLGLSPRVRLRRVILPQAMLLMLPPLTGQLIALVKDTAIVSLISVQELTFV 257

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  + N +G   EI L+    YL + + + + ++RL AK
Sbjct: 258 GTEMANSSGLVYEIWLLVAAAYLLICLSLFVLLSRLEAK 296


>gi|23501631|ref|NP_697758.1| amino acid ABC transporter permease [Brucella suis 1330]
 gi|161618714|ref|YP_001592601.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|254704070|ref|ZP_05165898.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|260566682|ref|ZP_05837152.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261754728|ref|ZP_05998437.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|23347548|gb|AAN29673.1| amino acid ABC transporter, permease protein [Brucella suis 1330]
 gi|161335525|gb|ABX61830.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
 gi|260156200|gb|EEW91280.1| polar amino acid ABC transporter [Brucella suis bv. 4 str. 40]
 gi|261744481|gb|EEY32407.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
          Length = 385

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 127/307 (41%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   +S    V     ++  +   + PL++     K + ++L   
Sbjct: 92  ACWAFVNAKYEQFLYGRYPISERWRVDLTALIFAAL---LVPLLIPKIPKKGLNAILFFL 148

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +V  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 149 VFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVI 208

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L + +I       L T++ +A      F  P               + +   I ++ +
Sbjct: 209 KTLSISFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 258

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + ++ L K
Sbjct: 259 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNTFIGLFK 318

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +             ++   F++      ++ +   +  +
Sbjct: 319 DTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 378

Query: 392 IALKEKK 398
           +    K+
Sbjct: 379 LDTGHKR 385



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +   ++E+ R +P + V+F  
Sbjct: 172 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSISFIEMVRGVPLVTVLFMA 231

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 232 SVMLPLFLPP 241


>gi|116251958|ref|YP_767796.1| general L-amino acid transport system permease protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|3182889|sp|Q52814|AAPM_RHIL3 RecName: Full=General L-amino acid transport system permease
           protein AapM
 gi|1154896|emb|CAA57935.1| general amino acid ABC type transporter [Rhizobium leguminosarum]
 gi|115256606|emb|CAK07694.1| General L-amino acid transport system permease protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 384

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 127/307 (41%), Gaps = 22/307 (7%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    I A     + G   L      A +  +++ +   +P L+      +  L+ + + 
Sbjct: 92  ACWAFISAKYDQFIFGRYPLGERWRPAIVGILFILLL--VPMLIP--SAPRKGLNAILLF 147

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
               V+ F +     GL      +     + +    +GI +SL       L R       
Sbjct: 148 AVLPVIAFWLLHGGFGLEVVETPLWGGLMVTLVLSFVGIAVSLPVGILLALGRRSRMPVI 207

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + L + +I       L T++ +A           +    F+       + +   I +S +
Sbjct: 208 RMLCVTFIEVIRGVPLITVLFMA----------SVMLPLFLPTGWNVDKLLRALIGVSIF 257

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + + ++   K
Sbjct: 258 TSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIVNTFIGTFK 317

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +          I  ++   FI+      ++ +   +   
Sbjct: 318 DTSLVTIIGMFDLLGIVKLNFSDANWASAVTPITGLIFAGFIFWLFCFGMSRYSGFMERH 377

Query: 392 IALKEKK 398
           +    K+
Sbjct: 378 LDTGHKR 384



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 37/77 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G L+  GR S   ++  +C  ++EV R +P + V+F  
Sbjct: 171 LWGGLMVTLVLSFVGIAVSLPVGILLALGRRSRMPVIRMLCVTFIEVIRGVPLITVLFMA 230

Query: 149 YKSVLSVLPIPDHSIVL 165
              +   LP   +   L
Sbjct: 231 SVMLPLFLPTGWNVDKL 247


>gi|297564130|ref|YP_003683103.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296848579|gb|ADH70597.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 212

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/229 (20%), Positives = 95/229 (41%), Gaps = 19/229 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +        +      +    +I V  +++ +VL L           +T    P+L+ 
Sbjct: 1   MFWDFEWTFEVMPDLLGGLWVTVQITVLGYLIALVLGLAI-----AIARRTPFFGPVLHA 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I   P ++ +   + L                          + +  + AA+ AE+
Sbjct: 56  VMEFIRTTPLIIQLVFVFLLT--------------PADISAMTVGVVVIGVHYAAYTAEV 101

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+  V +GQ EAA AL L   +    ++LPQA+R  IP L +  + + K++ L +A+
Sbjct: 102 YRSGIEGVAKGQWEAARALSLPASRTWGAIVLPQAIRRTIPALGNYLIAMFKDTPLLLAI 161

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +L++    + +   + +E   +   ++L +SI  A+ + RL  + A
Sbjct: 162 SVPELLTEAQQVGSADFRIVEAYTLVGILFLLVSIPSAILIRRLERRYA 210


>gi|304395667|ref|ZP_07377550.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304356961|gb|EFM21325.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 225

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V GI+       + R    K       +Y
Sbjct: 1   MYDFDWSSIAPSLPYLLNGLVITFKITITAVVFGILWGTLL-AVMRLSTFKPISWFAKIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+I++ RGQ  AA+ALG+T  +A +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIISISRGQGNAALALGMTQWQAMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E++L    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMVLFAGLVYFVISLSASLLVSYLKRK 222



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 44/78 (56%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S +     +L G V TF +  + ++   + GTL+   RLS  K ++W  ++YV +FR
Sbjct: 5   DWSSIAPSLPYLLNGLVITFKITITAVVFGILWGTLLAVMRLSTFKPISWFAKIYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S 
Sbjct: 65  SVPLVMVLLWFYLVVPSF 82


>gi|219855154|ref|YP_002472276.1| hypothetical protein CKR_1811 [Clostridium kluyveri NBRC 12016]
 gi|219568878|dbj|BAH06862.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 230

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 9/214 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               +I  FS V+ +V+ +  T  ++    K  + +  +YIS   + G P +V + L   
Sbjct: 13  PITLEILFFSVVIALVVGMILT-YAKVGKNKVVRCIASIYISF--MRGTPMIVQLLLA-- 67

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F    L   +F   +      +   IA S   AAF AEI RS  + + +GQ+EA  ++
Sbjct: 68  --FIGIPLILDSFGISTANWNNIIYAIIAFSLNEAAFFAEIFRSAYLDIDKGQIEAGQSI 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R ++  Q     +P  T+  + L+KN+SL +A+G  DL+ +   I       
Sbjct: 126 GMTKFQTFRRIIFVQVAAKALPNTTNMIIELMKNTSLGIAIGVTDLMGMAKQISYNNYGV 185

Query: 364 --IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              E  ++  FIY  + +++ +  + + A++   
Sbjct: 186 GQTETFIVAAFIYWIMGLILTIVSSNITARLNRY 219



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL     T  + F  ++ A ++G ++   ++  NK+V  I  +Y+   R  P +V +   
Sbjct: 8   ILNALPITLEILFFSVVIALVVGMILTYAKVGKNKVVRCIASIYISFMRGTPMIVQLLLA 67

Query: 149 YKSVLSV 155
           +  +  +
Sbjct: 68  FIGIPLI 74


>gi|205351950|ref|YP_002225751.1| glutamate/aspartate transport system permease GltJ [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205271731|emb|CAR36564.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326626989|gb|EGE33332.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 246

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T   R     
Sbjct: 5   WNWGIFLQEAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPDRFLSGL 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M+ +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMSLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   +  GF  T  L+ +  I A ++G++ G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R   ++ ++ +  +YVE+FRN+P +V  F  Y  V  +LP 
Sbjct: 53  LRTVPDRFLSGLGTLYVELFRNVPLIVQFFTWYLVVPELLPE 94


>gi|55377278|ref|YP_135128.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Haloarcula marismortui ATCC 43049]
 gi|55230003|gb|AAV45422.1| glutamine-binding periplasmic protein of glutamine ABC transporter
           [Haloarcula marismortui ATCC 43049]
          Length = 226

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 19/214 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S +LG  +   A  +  +  +   +A  L+     ++ G P LV+I + Y  
Sbjct: 27  VTVALTVASILLGFAIGFPAGAIEVYGSD---RARRLVEQVGVVLRGTPLLVIIMILY-- 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                        G S  S  F++  IAL   +AA+ ++I R  L +V  GQ+EAA A+ 
Sbjct: 82  ------------FGLSVSSSAFVTATIALGLRSAAYQSQIFRGALQSVDDGQLEAARAVA 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQ 362
           ++  +A R V++PQA+R  +P   +++  +LK++S+A+ +G  +L++ G  +    Q+  
Sbjct: 130 MSRFEAIRHVVVPQALRRSVPGFQNEFTIVLKDTSIAIVIGIGELLTTGQNLYEGGQSTA 189

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+EI L    +Y  L+      ++RL+   A+ E
Sbjct: 190 ALEIFLAVSLVYFVLTFATNRSLDRLSDYYAVPE 223


>gi|322390822|ref|ZP_08064332.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
 gi|321142492|gb|EFX37960.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC 903]
          Length = 228

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 1/211 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L    +LF   L + +  K  ++  ++Y++         L+L      
Sbjct: 18  PVTLLIMVVSILLSFFPALFL-ALGQIYKVKGVRSFSVIYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                     +I  S  T   +AEI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNSFFKSIGSHFNVFEINPIYYAFIIFSLMTTGSLAEILRSAILTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT+R+A   ++ PQA+R+ +P L +  +NL+K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTNRQAYIRIVFPQALRAALPNLCNLVINLVKGTSLVFVMTIKDITAIAKVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E  L+   +Y+ +  +I    N L  ++ L
Sbjct: 197 FESYLVIFILYIVICGVIQWGFNLLEKRLTL 227



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 35/92 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T  +    ++ +      +  G++   K V     +Y+   R  PP+++I F
Sbjct: 12  ATLGGVPVTLLIMVVSILLSFFPALFLALGQIYKVKGVRSFSVIYLAFIRATPPILLILF 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
            Y    S+L     SI   F +F  N      
Sbjct: 72  FYSLFPSLLNSFFKSIGSHFNVFEINPIYYAF 103


>gi|258620247|ref|ZP_05715286.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262164884|ref|ZP_06032622.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus
           VM223]
 gi|258587605|gb|EEW12315.1| arginine ABC transporter, permease protein [Vibrio mimicus VM573]
 gi|262027264|gb|EEY45931.1| arginine ABC transporter permease protein ArtQ [Vibrio mimicus
           VM223]
          Length = 229

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 4/168 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I GLP L+++   Y        L    FI  S     F+S  IALS   A++ ++ +R 
Sbjct: 56  VIRGLPELLVVLFIYFGSTQVLFLITGEFIEIS----PFISGVIALSLIFASYASQTLRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AV RGQ EAA ALG+    A   ++LPQA+R  +P L +Q+L LLK+++L   +G  
Sbjct: 112 ALKAVGRGQREAASALGIPPAHAFFRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVT 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DL+         T +A         +YL ++++    +  ++ K +++
Sbjct: 172 DLLKQAQLTSAATHEAFTWYATAAAVYLVITLITQRAVKVIDNKFSVQ 219


>gi|157146735|ref|YP_001454054.1| hypothetical protein CKO_02509 [Citrobacter koseri ATCC BAA-895]
 gi|157083940|gb|ABV13618.1| hypothetical protein CKO_02509 [Citrobacter koseri ATCC BAA-895]
          Length = 246

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSGM 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   +      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVVPELLPENIGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMNLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNRFLSGMGTLYVELFRNVPLIVQFFTWYLVVPELLPENIGMW 99


>gi|148642866|ref|YP_001273379.1| polar amino acid ABC transporter, permease component
           [Methanobrevibacter smithii ATCC 35061]
 gi|222445099|ref|ZP_03607614.1| hypothetical protein METSMIALI_00718 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350333|ref|ZP_05975750.1| ABC transporter, permease protein, polar amino acid uptake family
           [Methanobrevibacter smithii DSM 2374]
 gi|148551883|gb|ABQ87011.1| polar amino acid ABC transporter, permease component
           [Methanobrevibacter smithii ATCC 35061]
 gi|222434664|gb|EEE41829.1| hypothetical protein METSMIALI_00718 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861117|gb|EFC93415.1| ABC transporter, permease protein, polar amino acid uptake family
           [Methanobrevibacter smithii DSM 2374]
          Length = 216

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 93/190 (48%), Gaps = 10/190 (5%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    K  + L  +YIS  ++ G P ++ + + +   +       + F    + 
Sbjct: 33  LVVAWGRMSKFKPLRWLMKVYIS--IMRGTPLMLQLIVVFFAPY-------YVFGASLSP 83

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               +S+ IA S   +A+ AEI R G+ A+P+GQ EAA  LG    +   +++LPQ ++ 
Sbjct: 84  DYRMISVIIAFSINYSAYFAEIYRGGIEAIPKGQYEAAQVLGYNKLETFFIIILPQVIKI 143

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P +T++ + L+K++SL+  +   ++ +V   I      +I  +LI    Y   ++++A
Sbjct: 144 VLPSITNEVITLVKDTSLSFVIAIPEMFTVAKQIAAAEA-SIMALLIAGVFYYIFNVIVA 202

Query: 383 LFMNRLNAKI 392
             M  +  K+
Sbjct: 203 FVMEYIEEKL 212



 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 36/69 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S+  T +  G + +  +    ++ +  +G +V  GR+S  K + W+ +VY+ + R  P +
Sbjct: 4   STVITELCGGMITSIEIFLLTLLFSLPLGLVVAWGRMSKFKPLRWLMKVYISIMRGTPLM 63

Query: 143 VVIFFLYKS 151
           + +  ++ +
Sbjct: 64  LQLIVVFFA 72


>gi|69246347|ref|ZP_00603903.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|258616329|ref|ZP_05714099.1| Glutamine transport system permease protein [Enterococcus faecium
           DO]
 gi|68195300|gb|EAN09751.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
          Length = 218

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 19/226 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T++ +    +FSF++G +  +        F +  G          
Sbjct: 7   FSWMNIRFLLEGLKVTVEVSLFSIIFSFLIGGLAGVIRFANIPFFSKILG---------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I  +  L L+ + +  +F  P +              F S   AL+ + +A ++EI R
Sbjct: 57  VVIDIIRNLPLLLIIFFTYFALPQI--------GIQMNIFWSAVAALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL AVP+GQMEA ++ GLT+ +  R ++LPQA +S+IP + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 42/106 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +I + +IG L G  R +     + I  V +++ RN+P 
Sbjct: 8   SWMNIRFLLEGLKVTVEVSLFSIIFSFLIGGLAGVIRFANIPFFSKILGVVIDIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L++IFF Y ++  +    +        + +    +         NA
Sbjct: 68  LLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNA 113


>gi|260221678|emb|CBA30483.1| hypothetical protein Csp_C23770 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 271

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 10/217 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLY 223
           F+          T+      F  +  +G++L+L         R    F+ +  + LP L 
Sbjct: 38  FIFQTLAEGLWTTVYVAVISFTLAASIGLLLALASRSKHVWLRQGARFYIEVIRGLPALV 97

Query: 224 ISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           I  ++ F G P LV +   YQ   +  +  ++            +   +AL+   +AF+A
Sbjct: 98  ILLYVTFVGAPALVNL---YQWACEGWIAKEWLPDVQVRDVSNTVRGIVALALAYSAFLA 154

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL +V R Q+EAA A+GL      RLV+ PQA+R ++P L + ++ ++K+SSL  
Sbjct: 155 EVFRAGLQSVERAQIEAAQAIGLNRWLTFRLVVWPQAVRRVLPVLGNDFIAMVKDSSLVS 214

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
            +G  D+  +G    + +   +E   +   +YL L++
Sbjct: 215 VLGVNDITQLGKLYASSSFLTVETYNVVAVLYLMLTV 251



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 4/155 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               +  G   T ++A      A  IG L+     S +  +    R Y+EV R +P LV+
Sbjct: 39  IFQTLAEGLWTTVYVAVISFTLAASIGLLLALASRSKHVWLRQGARFYIEVIRGLPALVI 98

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS-LF 203
           + ++       L    +       +              +T   I   +      L+ +F
Sbjct: 99  LLYVTFVGAPALVN-LYQWACEGWIAKEWLPDVQVRDVSNTVRGIVALALAYSAFLAEVF 157

Query: 204 ATRL--SRHFHEKTGKALPLLYISTFLIFGLPTLV 236
              L        +  +A+ L    TF +   P  V
Sbjct: 158 RAGLQSVERAQIEAAQAIGLNRWLTFRLVVWPQAV 192


>gi|226323644|ref|ZP_03799162.1| hypothetical protein COPCOM_01419 [Coprococcus comes ATCC 27758]
 gi|225207828|gb|EEG90182.1| hypothetical protein COPCOM_01419 [Coprococcus comes ATCC 27758]
          Length = 228

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 10/213 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+F+ + V  + L L         H K    L  L +  ++I G P ++ + + Y    
Sbjct: 23  LKLFIVTLVGALPLGLVI-AFGSMSHFKPLSWLARLIV--WVIRGTPLMIQLLIIYYF-- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L   N I G   +  F++  ++     A + +EI R G+  VP GQ EA + LG+T
Sbjct: 78  --PGLVLHNPIWGGGETGRFLAAAVSFIINYACYFSEIYRGGIQGVPEGQKEAGLVLGMT 135

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQA 363
             +    + L Q ++ I+PP++++ + L+K++SLA  +   +++  G   +  +     A
Sbjct: 136 KHQIFFKITLLQMIKRIVPPMSNEIITLVKDTSLARIIALQEIIWAGQAFMKGSHGISGA 195

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I  +      YL  + ++ + + RL  K+    
Sbjct: 196 IWPLFFTAVYYLIFNGILTVLLGRLEKKLEYFR 228



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 37/74 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+ VGF+ T  L    ++ A  +G ++  G +S  K ++W+ R+ V V R  P ++ +  
Sbjct: 14  ALNVGFLQTLKLFIVTLVGALPLGLVIAFGSMSHFKPLSWLARLIVWVIRGTPLMIQLLI 73

Query: 148 LYKSVLSVLPIPDH 161
           +Y     VL  P  
Sbjct: 74  IYYFPGLVLHNPIW 87


>gi|161524063|ref|YP_001579075.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189351176|ref|YP_001946804.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|221199370|ref|ZP_03572414.1| histidine ABC transporter, permease protein HisM [Burkholderia
           multivorans CGD2M]
 gi|221205728|ref|ZP_03578743.1| histidine ABC transporter, permease protein HisM [Burkholderia
           multivorans CGD2]
 gi|221211583|ref|ZP_03584562.1| histidine ABC transporter, permease protein HisM [Burkholderia
           multivorans CGD1]
 gi|160341492|gb|ABX14578.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189335198|dbj|BAG44268.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|221168944|gb|EEE01412.1| histidine ABC transporter, permease protein HisM [Burkholderia
           multivorans CGD1]
 gi|221174566|gb|EEE06998.1| histidine ABC transporter, permease protein HisM [Burkholderia
           multivorans CGD2]
 gi|221180655|gb|EEE13058.1| histidine ABC transporter, permease protein HisM [Burkholderia
           multivorans CGD2M]
          Length = 237

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R    K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKRKWLSRAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQVVRGTPML-DAFFREGMNCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 TFTMYRRVILPSALRRSLPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     R   +
Sbjct: 203 FGIAALLYLVISFTLVWLFRRAERR 227



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y    + G   T WL    +     +   +   R+S  K ++    +
Sbjct: 5   IQEYWRNYLYTDGYR---ITGVAITLWLLVVSIGLGFCLSVPLAVARVSKRKWLSRAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     N  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQVVRGTPMLDAFFREGMNCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|91782896|ref|YP_558102.1| ABC lysine/arginine/ornithine transporter, innermembrane subunit
           [Burkholderia xenovorans LB400]
 gi|91686850|gb|ABE30050.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 237

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + V S  +G   ++    ++R   ++       LY  T++  G P
Sbjct: 14  YWDGQRMSGLAVTLWLLVASVGIGFCAAIPL-AVARVSKKRWLSTPVRLY--TYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + L Y   +    +     +  +     F    +A +  T A+  EI    + +  
Sbjct: 71  LYVQLLLIYTGMYSLEFVRSHQLL-DAFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTS 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R +++P A+R  +P  +++ + +L  +++A      D++ V 
Sbjct: 130 HGEVEAARAYGMSGFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + T Q+ +   +   IYL +S  +     R    
Sbjct: 190 RDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERH 227



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +         +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHS 162
             + S+  +  H 
Sbjct: 80  TGMYSLEFVRSHQ 92


>gi|82544789|ref|YP_408736.1| histidine transport system permease protein [Shigella boydii Sb227]
 gi|81246200|gb|ABB66908.1| histidine transport system permease protein [Shigella boydii Sb227]
 gi|320174664|gb|EFW49797.1| Histidine ABC transporter, permease protein HisQ [Shigella
           dysenteriae CDC 74-1112]
 gi|320183764|gb|EFW58598.1| Histidine ABC transporter, permease protein HisQ [Shigella flexneri
           CDC 796-83]
          Length = 228

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFFG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFFGL 72


>gi|254382234|ref|ZP_04997595.1| glutamate transporter permease [Streptomyces sp. Mg1]
 gi|194341140|gb|EDX22106.1| glutamate transporter permease [Streptomyces sp. Mg1]
          Length = 292

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 26/218 (11%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   VFS +LG VL+  A RLS H   +  + +  L +  F        
Sbjct: 73  LRGLGNTLKAFAYASVFSLLLGAVLA--AGRLSVH---RPLRWIATLCVEFFR------- 120

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                        PVL    FI  +       +L   L+ Y  + +AE+ R+G+ AV RG
Sbjct: 121 -----------AMPVLVMIFFIFVALKVQPLPALVAGLTLYNGSVLAEVFRTGINAVDRG 169

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALG+   + T  VL PQA+R+++P + SQ +  LK++SL   + + + +  G  
Sbjct: 170 QREAAYALGMRKTQVTTYVLAPQALRAMLPTIISQLVVALKDTSLGYLITYEEFLHAGKL 229

Query: 356 IINQTGQAIEIILIWMF---IYLSLSIMIALFMNRLNA 390
           I +     +  I + M    IY+ + ++++ F   +  
Sbjct: 230 IASNLDYDLPFIPVVMIISPIYIGMCMLLSWFATWVAR 267



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 39/64 (60%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT        + + ++G ++ AGRLS ++ + WI  + VE FR +P LV+IFF+
Sbjct: 72  LLRGLGNTLKAFAYASVFSLLLGAVLAAGRLSVHRPLRWIATLCVEFFRAMPVLVMIFFI 131

Query: 149 YKSV 152
           + ++
Sbjct: 132 FVAL 135


>gi|120612709|ref|YP_972387.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120591173|gb|ABM34613.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 243

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 99/235 (42%), Gaps = 10/235 (4%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D  + L          L +          + + + V+ +V       L      +     
Sbjct: 6   DWQVFLQDPGGDYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNRFLVGF 65

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              ++  F    +P LV I L Y                       F+ + +AL  +T+A
Sbjct: 66  GNAWVELF--RNIPLLVQIFLWY--------HVVPAIFPVMKSVSGFILVVLALGFFTSA 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            IAE VRSG+ A+PRGQ  A +ALG T  +  R VLLP A R I+PPLTS+ +N+ KNSS
Sbjct: 116 RIAEQVRSGIQALPRGQRYAGMALGFTTVQYYRYVLLPMAFRIILPPLTSETMNIFKNSS 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +A AV   +L         +T + IEI L    +Y+  +  I   M  +  +  +
Sbjct: 176 VAFAVSVTELTMFAMQAQEETSRGIEIYLAVTGLYVVSAFAINRIMAFIEKRARV 230



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEVFRNIPPL 142
           +Y   +L  +  T  +A   ++ A + G+++G  R    N+ +      +VE+FRNIP L
Sbjct: 20  TYLQWMLSAWGWTVSVALLALVIALVAGSVIGTLRTLPDNRFLVGFGNAWVELFRNIPLL 79

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           V IF  Y  V ++ P+   
Sbjct: 80  VQIFLWYHVVPAIFPVMKS 98


>gi|89897022|ref|YP_520509.1| hypothetical protein DSY4276 [Desulfitobacterium hafniense Y51]
 gi|89336470|dbj|BAE86065.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 223

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 26/240 (10%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--LFATRLSRHFHEKT 215
                 +           L+   +++           V G++ S  L   R     + + 
Sbjct: 7   WFKWQALFSDWTIFAEGFLTTVMVSVLGLCLALALGVVFGVLGSTHLKLFRAINRVYVEF 66

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PL+    F+  GLP + L+                         P F    + +  
Sbjct: 67  IQNTPLVIQVFFVYNGLPHIGLML------------------------PVFSVGVLGVGV 102

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y  A+IAE+VR+G+ A+ RGQMEAA++ G ++  A R V+LPQA R ++PPLT+Q ++L+
Sbjct: 103 YHGAYIAEVVRAGIQAIHRGQMEAALSQGFSYWGAMRHVILPQAARVVLPPLTNQAVSLI 162

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           KN+S+   +   DL+    +            +    +YL L   +A     L  K+ + 
Sbjct: 163 KNTSVLAMIAGGDLMYRADSWSAGNIYYGPAYVTAGLLYLLLCFPLAQLAQYLERKMEVS 222



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 43/103 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            T    GF+ T  ++  G+  A  +G + G    +  KL   I RVYVE  +N P ++ +
Sbjct: 17  WTIFAEGFLTTVMVSVLGLCLALALGVVFGVLGSTHLKLFRAINRVYVEFIQNTPLVIQV 76

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           FF+Y  +  +  +     V   G+ + +       +     A 
Sbjct: 77  FFVYNGLPHIGLMLPVFSVGVLGVGVYHGAYIAEVVRAGIQAI 119


>gi|319791542|ref|YP_004153182.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315594005|gb|ADU35071.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 243

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 18/247 (7%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           +      V           +  ++ +      ++ +       V   ++GI+ +L  +  
Sbjct: 1   MGNWDWQVFLQDPGGDYPTYWQWMLSAWGWTVSVALLALVVALVLGSLIGIIRTLPDSPW 60

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
              F                L   +P LV I L Y +            I      P F+
Sbjct: 61  LVRFGNA----------WVELFRNIPLLVQIFLWYHVIPAL--------IPVMKSVPSFI 102

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            + +AL  +T+A IAE VRSG+ A+P+GQ  A +A+G T  +  R V+LP A R IIPPL
Sbjct: 103 LVVLALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTTQYYRYVILPMAYRIIIPPL 162

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           TS+ +N+ KNSS+A AV   +L         +T + IE+ L     Y+  ++ I   M  
Sbjct: 163 TSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYLAVTACYVVSALAINRLMAF 222

Query: 388 LNAKIAL 394
           +  K  +
Sbjct: 223 IEKKTRV 229



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEVFRNIPPL 142
           +Y   +L  +  T  +A   ++ A ++G+L+G  R    +  +      +VE+FRNIP L
Sbjct: 19  TYWQWMLSAWGWTVSVALLALVVALVLGSLIGIIRTLPDSPWLVRFGNAWVELFRNIPLL 78

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           V IF  Y  + +++P+          + 
Sbjct: 79  VQIFLWYHVIPALIPVMKSVPSFILVVL 106


>gi|269796950|ref|YP_003316405.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
 gi|269099135|gb|ACZ23571.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
          Length = 288

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/154 (35%), Positives = 90/154 (58%), Gaps = 2/154 (1%)

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PVL    F   +     F ++ I L+ Y AA +AEI+R+GL A+P+GQ EA  A+GLT
Sbjct: 119 GLPVLLMMLFALLAFGLSSFQAVVIGLTLYNAAIVAEILRAGLAALPKGQAEAGTAIGLT 178

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--QAI 364
             +  RLV LPQ +R ++P L SQ++ LLK+SSL   VG+ +L++   T  N  G    +
Sbjct: 179 RGQTLRLVQLPQVIRLMLPSLISQFVVLLKDSSLGFIVGYPELLNAMKTNYNFFGSDSRL 238

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + L+   +YL+++I ++     +  +++ + +K
Sbjct: 239 PLFLVVAVVYLTVNIALSRLAVYIEKRLSSRGQK 272



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 18/131 (13%)

Query: 17  KFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLG-IGFLSERAGF 70
             LYD      R       I+ A++L  +  W +      M    +       L++    
Sbjct: 4   NVLYDAPGPKTRRLERIGSIVFAVILLGLLAWMI----KGMADRGIFDDRWAVLTDP--- 56

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
                    +++  + + ++ G   T   A      A ++  ++   R S  ++V     
Sbjct: 57  -----PKGQSAEDVWKSLVVTGLGATLKAAVVAAPLALVLAFVLAILRTSGIRVVRGAAT 111

Query: 131 VYVEVFRNIPP 141
             +EV R +P 
Sbjct: 112 AVIEVLRGLPV 122


>gi|152981388|ref|YP_001351724.1| ABC-type amino acid transport system, permease component
           [Janthinobacterium sp. Marseille]
 gi|151281465|gb|ABR89875.1| ABC-type amino acid transport system, permease component
           [Janthinobacterium sp. Marseille]
          Length = 218

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 11/223 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            ++          +       V S V  ++  +    +      K+G    +  I   + 
Sbjct: 1   MISFSLWDILRNLLLAGRWTVVLSLVTFLLGGMLGLLILFFRTSKSGALRNVARIYIEIF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F         P +++  + L+ ++A+F+AEI R  +
Sbjct: 61  QGTPLLMQLFLVF-----------FGIALFGIEVPAWLAAGLTLTLWSASFLAEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRGQ EA+  L + + +  R V+LPQA+R  +PP     + ++K +++   +GF +L
Sbjct: 110 EAIPRGQWEASSVLAMNYVQQMRYVILPQALRIALPPTIGFSVQIIKGTAVTSIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 I N T     +       Y  L   ++ +   L  K 
Sbjct: 170 SKAATVITNATFMPFTVYAAAGLFYFILCWPLSRYSQFLERKF 212


>gi|312198105|ref|YP_004018166.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311229441|gb|ADP82296.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 336

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 8/168 (4%)

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               + ++ L Y +    P +            P F  L + L+ Y +AF AEI R+G++
Sbjct: 107 FWLAIPVLLLIYFIGLGLPTI--------GLDLPVFWFLVLGLTLYNSAFFAEIFRTGIV 158

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ EAA ALGL    A R V+LPQA+R ++P L SQY+ LLK++SL   + + +L+
Sbjct: 159 ALPSGQREAAAALGLGFWPAMRFVVLPQAIRRMVPSLLSQYIVLLKDTSLGFVLPYPELL 218

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G          ++  ++    Y++++  ++  + RL A+      +
Sbjct: 219 RRGQITGQYAQSVLQSYVVVAVAYVAVNASLSYLVRRLEARQRRPGGR 266


>gi|237732341|ref|ZP_04562822.1| histidine transport system permease hisQ [Citrobacter sp. 30_2]
 gi|226907880|gb|EEH93798.1| histidine transport system permease hisQ [Citrobacter sp. 30_2]
          Length = 228

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 90/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L    +T++      V + ++G+V +      SR           +    T LI 
Sbjct: 5   FSGVILQGAIVTLELALSSVVLAVLIGLVGAAAKLSQSRAMGL-------IFEGYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +                G       ++  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIALNTITDAIGIGQIDIDPMVAGIITLGFIYGAYFTETFRGAFM 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 AVPKGHIEAATAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T +     ++   IYL  + +    +  L  + ++  K+
Sbjct: 178 KATQLAGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLYLERRYSVGVKR 225



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +  A +LS ++ +  I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAAAKLSQSRAMGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|322834720|ref|YP_004214747.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321169921|gb|ADW75620.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 357

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 69/339 (20%), Positives = 129/339 (38%), Gaps = 54/339 (15%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
             F+  R G +   G+ P+         ++VG +          +       +   GR  
Sbjct: 67  WVFIHARFG-QFMYGLYPFDQRWRINVTLIVGLLT---------LAPIFFKAMPRRGR-- 114

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
                      Y+  +  + P+     LY   L                 +  R     T
Sbjct: 115 -----------YIACWMVLFPIFTWIMLYGGFL-------------GLSRVETRQWGGLT 150

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           LT+   A     +  LGI+L+L     +R       + L +++I  +    L T++ ++ 
Sbjct: 151 LTLIIAAVGIAGALPLGIMLAL-----ARRSSLPVVRILSVIFIEFWRGVPLITVLFMS- 204

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                     +    F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA
Sbjct: 205 ---------SVMLPLFMTEGTSIDKLVRALVGVVLFQSAYVAEVVRGGLQALPKGQTEAA 255

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--- 357
            +L L + K   LV+LPQA++ +IP L +  + L K++SL + +G  DL S         
Sbjct: 256 ESLALGYWKTQGLVILPQALKMVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDP 315

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              G + E  +    +Y      ++ +   L  +     
Sbjct: 316 EWLGMSTEGYVFAAAVYWIFCFSMSRYSQHLERRFHTGR 354


>gi|83592633|ref|YP_426385.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575547|gb|ABC22098.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 227

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                +     LGIV   FA  L R       + +   YI   +I G P L+ + L Y  
Sbjct: 21  VTVLCWSAGCALGIVFG-FALALLRRLPFAPLRWVVRAYIE--VIRGTPFLIQLFLLYSG 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      FIG    +    +  + L  Y +A+ AEI R G  AVP+G +EA  +L 
Sbjct: 78  G---------PFIGLRLEAT--TAGILGLGIYGSAYFAEIFRGGFEAVPKGYVEAGESLS 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R +++P  + +I+P + +  + L K + +   +   +L+    T+  +T    
Sbjct: 127 MSPLVILRRIVVPTMLVAILPAIVNMMIILTKETVVLSIITVPELMYEMQTMAAETFAVF 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E+I      Y  L  +++    R+ A++  
Sbjct: 187 EVIFGLALFYWLLVEVVSRLGRRVEARLTR 216



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 36/103 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +IL GF  T     +G     + G  +   R      + W+ R Y+EV R  P L+ 
Sbjct: 11  YGPSILRGFGVTVLCWSAGCALGIVFGFALALLRRLPFAPLRWVVRAYIEVIRGTPFLIQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +F LY     +    + +     G+ +               A
Sbjct: 71  LFLLYSGGPFIGLRLEATTAGILGLGIYGSAYFAEIFRGGFEA 113


>gi|310820157|ref|YP_003952515.1| amino acid ABC transporter permease [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393229|gb|ADO70688.1| Amino acid ABC transporter, permease protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 482

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 17/221 (7%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +     A + +   V  + L++       L R +  +    L   Y+   L+ G P
Sbjct: 275 QGHVVMFFQAAGVTLLVSVGAMALAVPLGLLLALVRLYGPRWLSRLATAYVE--LLRGTP 332

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ +   Y L+F            G      F +  + L    AA+ AE+ R+G++AVP
Sbjct: 333 VLLQL---YVLYFGL---------AGVLRLDAFSAAILGLGLNYAAYEAEVYRAGVLAVP 380

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA+ALG+T   A R V++PQA R  +P +T+ ++ LLK+SSL   +   +L    
Sbjct: 381 RGQMEAALALGMTTPLALRRVVVPQAFRVALPGVTNDFIALLKDSSLVSVISVVELTKRM 440

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +       +    +   +YL++S  ++     L AK+  
Sbjct: 441 TIVSVDVRSWLLPGALCAALYLAMSYPLSRLARWLEAKLER 481



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                  T  ++   M  A  +G L+   RL   + ++ +   YVE+ R  P L+ ++ L
Sbjct: 281 FFQAAGVTLLVSVGAMALAVPLGLLLALVRLYGPRWLSRLATAYVELLRGTPVLLQLYVL 340

Query: 149 YKSV 152
           Y  +
Sbjct: 341 YFGL 344


>gi|254178708|ref|ZP_04885363.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei ATCC 10399]
 gi|254358532|ref|ZP_04974805.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei 2002721280]
 gi|148027659|gb|EDK85680.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei 2002721280]
 gi|160699747|gb|EDP89717.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei ATCC 10399]
          Length = 315

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 4/219 (1%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215
             D  +   + M+L    L    L++       +  F L I       + R +   +   
Sbjct: 74  EMDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVA 133

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS 
Sbjct: 134 FRNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLALRWPSFEFVAGWLGLSG 191

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+
Sbjct: 192 YTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLI 251

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           KNSSL +A+G A+L      +  +T +      +   +Y
Sbjct: 252 KNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLY 290



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 83  YLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 142

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 143 LLFWYFGVAALLPEPAMAW 161


>gi|296103994|ref|YP_003614140.1| histidine/lysine/arginine/ornithine transport system permease
           protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058453|gb|ADF63191.1| histidine/lysine/arginine/ornithine transport system permease
           protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 228

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L A   ++    K    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVLIGL-AGAGAKLSANKPLALIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G       ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNSVTDAMGMGQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPKGHIEAATAYG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGVIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG      +LSANK +A I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVLIGLAGAGAKLSANKPLALIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|330823280|ref|YP_004386583.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|329308652|gb|AEB83067.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 223

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 14/236 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            ++     FL+   L    L     + +      LG V       L R   +K   A   
Sbjct: 1   MLMHIDWSFLSWELLRGFVLKGFIFSMVLTVIATLGGVFFGTLLALMRLSGKKWLMAPAT 60

Query: 222 LYISTFLIFGL-PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +Y++      L   ++   L   L   +P+  +              S  I    + AA+
Sbjct: 61  IYVNGMRSIPLVMVILWFFLLVPLIIGRPIGAE-------------ASAIITFVAFEAAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI+R+G+ +VPRGQ+ A  ALG+T+ +  +LV+LPQA R+++P L +Q + L +++SL
Sbjct: 108 FSEIMRAGIQSVPRGQVFAGQALGMTYSQNMKLVVLPQAFRNMLPVLLTQTIILFQDTSL 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             A+G  D++          G+ +E  L     Y  +   ++  + RL+ KIA+  
Sbjct: 168 VYAIGAYDMLKGFDVAGKNFGRPVEAYLAAAVAYFVICYSLSWAVKRLHKKIAIIR 223



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 71/193 (36%), Gaps = 8/193 (4%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF+ +  L     +     GTL+   RLS  K +     +YV   R+IP ++VI + +
Sbjct: 20  LKGFIFSMVLTVIATLGGVFFGTLLALMRLSGKKWLMAPATIYVNGMRSIPLVMVILWFF 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             V  ++  P  +       F+      F  +       +       G  L +  ++  +
Sbjct: 80  LLVPLIIGRPIGAEASAIITFVAFEAAYFSEIMRAGIQSVPRGQVFAGQALGMTYSQNMK 139

Query: 210 H--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                +     LP+L   T ++F   +LV     Y +      L  F+  G +   P   
Sbjct: 140 LVVLPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDM------LKGFDVAGKNFGRPVEA 193

Query: 268 SLYIALSCYTAAF 280
            L  A++ +   +
Sbjct: 194 YLAAAVAYFVICY 206


>gi|313141609|ref|ZP_07803802.1| L-cystine transport system permease protein tcyM [Helicobacter
           canadensis MIT 98-5491]
 gi|313130640|gb|EFR48257.1| L-cystine transport system permease protein tcyM [Helicobacter
           canadensis MIT 98-5491]
          Length = 215

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 5/208 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH- 245
             I +  F+LG +L L    L R +       L  LYIS F   G+P LV I L Y    
Sbjct: 1   MAIAIVGFILGAILGLIL-SLIRIYRVPILFQLATLYISFF--RGIPVLVQIFLAYYGIP 57

Query: 246 -FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +    Q+      +       +Y+  + Y +A+++EI RS ++++ +GQ+EAA ++G
Sbjct: 58  LVLRYFNHQYGLNIDISGIDAIYFMYLVYALYCSAYLSEIFRSSILSIDKGQLEAAYSVG 117

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +A  +++LPQ+M   +P + + ++ L+K +SL  A    +++ +     +++ + +
Sbjct: 118 MNTTQALFIIILPQSMLLALPNILNFFIILIKETSLVFAASVPEIMGIATLEADRSSKFL 177

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           E+ +I   IY  +SI +      L  K+
Sbjct: 178 EVYIIAALIYWVISIFLEKSFAILETKL 205



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%)

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
             +A  G I   I+G ++   R+    ++  +  +Y+  FR IP LV IF  Y  +  VL
Sbjct: 1   MAIAIVGFILGAILGLILSLIRIYRVPILFQLATLYISFFRGIPVLVQIFLAYYGIPLVL 60

Query: 157 PIPDHSIVLP 166
              +H   L 
Sbjct: 61  RYFNHQYGLN 70


>gi|317054117|ref|YP_004118142.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952112|gb|ADU71586.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 230

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 17/224 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+         +FV+ ++L+L     +R    +  + L  LY +TF   G P
Sbjct: 12  MYLHGTALTLLLTVVSLAIAFVISVLLAL-----ARDSAPRPLRGLIFLYTTTF--RGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGL 289
            L+ + L Y        L QF+ +  S + P      + + +A    TAA+  EI   GL
Sbjct: 65  LLIQLFLIYY------GLAQFDLLRASFLWPWLSSPLICVLLAFILNTAAYTTEIFAGGL 118

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             +P G++EAA A G+++    R +L P  +   +    ++ + +L  +SLA  V   ++
Sbjct: 119 RHLPAGEIEAARAFGMSYPTLARRILFPAMLSRSLSLYGNETIMMLHATSLASTVTLMEV 178

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             V   I        E  +    IYL L++ + L    L  + A
Sbjct: 179 TGVARNISLNYYIQFEPYVTAGAIYLVLTLSLVLAFRYLEKRYA 222



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A +I  L+   R SA + +  +  +Y   FR  P L+ +F +Y  +     +    +  
Sbjct: 30  IAFVISVLLALARDSAPRPLRGLIFLYTTTFRGTPLLIQLFLIYYGLAQFDLLRASFLWP 89

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
                L    L+F   T     +IF    
Sbjct: 90  WLSSPLICVLLAFILNTAAYTTEIFAGGL 118


>gi|329922570|ref|ZP_08278145.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus sp. HGF5]
 gi|328942114|gb|EGG38396.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus sp. HGF5]
          Length = 217

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 15/226 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L       +    +  FS +L IV+S FA  L R       +   ++Y+  F   G
Sbjct: 5   WIDFLPTLLKGAEITIIVAFFSAILAIVMS-FAAGLCRLSKLWIVRTATVVYVEVF--RG 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV +   + L+F  P +            P+ ++  +A+     A+ +EIVRS ++A
Sbjct: 62  TSLLVQL---FWLYFALPFI--------GIELPKMLAAILAIGLNFGAYGSEIVRSAVLA 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQ EAA+AL +   +    V+LPQA   ++PP  +Q + L+K++SL   +  ADL  
Sbjct: 111 VPKGQWEAAVALNMRPWQRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADLTY 170

Query: 352 VGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               + N       EI+++ + +Y  ++ ++++ +  L  K+    
Sbjct: 171 QAMVLRNNYISWTTEILVLLLLMYFVIATLVSMAVRLLERKLTAGR 216



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 39/89 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  +AF   I A ++    G  RLS   +V     VYVEVFR    LV 
Sbjct: 8   FLPTLLKGAEITIIVAFFSAILAIVMSFAAGLCRLSKLWIVRTATVVYVEVFRGTSLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +F+LY ++  +       +     + LN 
Sbjct: 68  LFWLYFALPFIGIELPKMLAAILAIGLNF 96


>gi|158424907|ref|YP_001526199.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331796|dbj|BAF89281.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 227

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 14/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F   +         + +    ++ + S VLG +L      + R       K L   
Sbjct: 1   MTYQFDFAVLLPFWREFAMGVWLTLQLSLISTVLGFILGTL-CAIGRADGPPWVKFLVAT 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   +I   P LV + + Y           F            ++  +AL     A+ +
Sbjct: 60  YVE--IIRNTPLLVQVFIVY-----------FGIATLGIHVSANLAAVLALVVNVGAYTS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL ++ + Q+EAA  LGL+  +    V++  A+  + P LTSQY+ L+  SS+  
Sbjct: 107 EIVRAGLESIHKSQLEAAECLGLSRPQTYWHVIVRPAIERVYPALTSQYVLLMLASSITS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +L +V   I + T ++ E  ++   +YL+LS ++ L        + ++ +K
Sbjct: 167 QISAEELTAVANRIQSDTFRSFETYIVVGVLYLALSFVVRLAFWLFGLVVFVRRRK 222



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 38/89 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +     +G   T  L+    +   I+GTL   GR      V ++   YVE+ RN P LV
Sbjct: 12  PFWREFAMGVWLTLQLSLISTVLGFILGTLCAIGRADGPPWVKFLVATYVEIIRNTPLLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +F +Y  + ++      ++     + +N
Sbjct: 72  QVFIVYFGIATLGIHVSANLAAVLALVVN 100


>gi|89897436|ref|YP_520923.1| hypothetical protein DSY4690 [Desulfitobacterium hafniense Y51]
 gi|89336884|dbj|BAE86479.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 236

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 18/242 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                  ++   F +           LT+       +FS +LG++ S+        +   
Sbjct: 10  TEREAGMNLNWEFILQNIPLYEKAAWLTLKLAFWGTLFSLLLGLICSVIMY-----YRIP 64

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             K +   YI   L    P L+ +   Y L+F  P L             E     + LS
Sbjct: 65  LLKTIMGGYIE--LSRNTPLLIQV---YFLYFGLPKL--------GVTLSETACAILGLS 111

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               +++AE +R G+ AV + Q+E+ ++LGL+  +  R V+ PQA    IP L +  + L
Sbjct: 112 FLGGSYMAEALRGGMEAVSKSQLESGLSLGLSRWQLIRYVVFPQAFSFSIPALGANCIFL 171

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LK +S+  A+   DL++V   +I    Q +E +L+ +  YL + + ++LF+  L  K+  
Sbjct: 172 LKETSVLGAIAILDLMNVTKDLIGMYYQTVESLLMLVVSYLIILLPLSLFLTWLERKVRY 231

Query: 395 KE 396
            E
Sbjct: 232 AE 233



 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 4/183 (2%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LAF G + + ++G +          L+  I   Y+E+ RN P L+ ++FLY  +  +
Sbjct: 37  TLKLAFWGTLFSLLLGLICSVIMYYRIPLLKTIMGGYIELSRNTPLLIQVYFLYFGLPKL 96

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF---H 212
                 +     G+           L     A +       G+ L L   +L R+     
Sbjct: 97  GVTLSETACAILGLSFLGGSYMAEALRGGMEA-VSKSQLESGLSLGLSRWQLIRYVVFPQ 155

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
             +     L     FL+     L  IA+   ++  K ++G +     S +      L I 
Sbjct: 156 AFSFSIPALGANCIFLLKETSVLGAIAILDLMNVTKDLIGMYYQTVESLLMLVVSYLIIL 215

Query: 273 LSC 275
           L  
Sbjct: 216 LPL 218


>gi|226951613|ref|ZP_03822077.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Acinetobacter sp. ATCC 27244]
 gi|294651270|ref|ZP_06728596.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226837643|gb|EEH70026.1| ABC glutamate/aspartate transporter, inner membrane subunit GltJ
           [Acinetobacter sp. ATCC 27244]
 gi|292822836|gb|EFF81713.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 247

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 10/246 (4%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK-IFVFSFVLGIVLSLFATRLSRH 210
           +               G       +      +   A   +  + +LG +L +      R 
Sbjct: 1   MTYSWNWGVLWQSTGVGDTTYLNWVVTGLGWLVVIAVVAWTIAMLLGSILGIM-----RT 55

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMS 268
              KT +A+   Y++ F    +P L+ + + + +  +F    +  +        +   +S
Sbjct: 56  LPNKTARAIGTAYVTLF--RNVPLLIQLFIWFYVVPNFLPAPIKNWWMSDLGANTTALIS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+G+ A+P+GQ+ A  A+G +  +  R V+LPQ+ R+I+PPL+
Sbjct: 114 ASIGLGLFTAARVCEQVRTGIEALPQGQINAGYAMGFSTAQLYRYVILPQSFRTILPPLS 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+  N +KN+S+A  VG A+++S   TI   T   IEI  I   I++ ++I +   MN L
Sbjct: 174 SELTNCVKNTSVASLVGVAEIISQMKTISEYTQNTIEIYTIVTIIFIVINICLISAMNLL 233

Query: 389 NAKIAL 394
             ++ +
Sbjct: 234 EKRLRI 239



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 41/86 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D++Y   ++ G      +A      A ++G+++G  R   NK    I   YV +FRN+P 
Sbjct: 18  DTTYLNWVVTGLGWLVVIAVVAWTIAMLLGSILGIMRTLPNKTARAIGTAYVTLFRNVPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF 167
           L+ +F  +  V + LP P  +  +  
Sbjct: 78  LIQLFIWFYVVPNFLPAPIKNWWMSD 103


>gi|217421697|ref|ZP_03453201.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
 gi|217395439|gb|EEC35457.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
          Length = 315

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 4/219 (1%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKT 215
             D  +   + M+L    L    L++       +  F L I       + R +   +   
Sbjct: 74  EMDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVA 133

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS 
Sbjct: 134 FRNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLALRWPSFEFVAGWLGLSG 191

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+
Sbjct: 192 YTSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLI 251

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           KNSSL +A+G A+L      +  +T +      +   +Y
Sbjct: 252 KNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLY 290



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 83  YLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 142

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 143 LLFWYFGVAALLPEPAMAW 161


>gi|126641538|ref|YP_001084522.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
          Length = 196

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 10/204 (4%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           ++G +L      + R  +          Y+  F       + LI + +  +F  P + +F
Sbjct: 1   MMGGILIGTPLAMMRLSNNALASNFAKFYVDLFR-----GIPLIQVIFIFYFLLPKIFEF 55

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                 T      S  +  + + AAF +EIVRSG+ ++ +GQ+ A  ALG T+ ++ R V
Sbjct: 56  ---QSDTYWGPLFSSVVTFAIFEAAFFSEIVRSGIQSISKGQVNAGYALGFTYGQSMRYV 112

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI--EIILIWMF 372
           +LPQA R+++P L +Q + L ++ SL   +   D +    T+ N  G        LI   
Sbjct: 113 VLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRADTLANTYGPETKATFYLIVAV 172

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           +Y   S +++  + RL  KIA+  
Sbjct: 173 VYFCSSFVLSQLVKRLQKKIAIIR 196


>gi|309777347|ref|ZP_07672308.1| amino acid ABC transporter, permease protein [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308914888|gb|EFP60667.1| amino acid ABC transporter, permease protein [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 213

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 91/224 (40%), Gaps = 15/224 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M    + L      +      +V +     VL+L      R        ++   YI  ++
Sbjct: 1   MDFFIQLLPAFVEGLKITLFFWVVTLAGSFVLAL-PMVYIRLSRNAVVSSIVRFYI--YI 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P L+ +   Y   F  P L                +  +A      A+  EI+R G
Sbjct: 58  MRGTPLLLQLMFVY---FGLPYL--------GIRLDRMTAAILAFLLNYTAYFTEILRGG 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++  GQ EAA  LG ++      +LLPQA+R+ IP   ++ L LLK++ L   +G  +
Sbjct: 107 VQSIDEGQKEAAKILGYSNAYTFLHILLPQALRNCIPSFINESLTLLKDTCLVSILGIDE 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+     I   T       +    IYL L++ I+  +N L  ++
Sbjct: 167 LLRYAK-IAAGTYATGLPFIYVGVIYLVLNMPISRGLNYLEKRL 209



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A + G   T +     +  + ++   +   RLS N +V+ I R Y+ + R  P L+ + F
Sbjct: 10  AFVEGLKITLFFWVVTLAGSFVLALPMVYIRLSRNAVVSSIVRFYIYIMRGTPLLLQLMF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +  +    D          LN        L     + 
Sbjct: 70  VYFGLPYLGIRLDRMTAAILAFLLNYTAYFTEILRGGVQSI 110


>gi|326318772|ref|YP_004236444.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375608|gb|ADX47877.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 243

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 10/235 (4%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           D  + L          L +          + + + V+ +V       +      K     
Sbjct: 6   DWQVFLQDPGGEYPTYLQWMLSAWGWTVSVALLALVIALVAGSVIGTIRTLPDNKFLVGF 65

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              ++  F    +P LV I L Y                       F+ + +AL  +T+A
Sbjct: 66  GNAWVELF--RNIPLLVQIFLWY--------HVVPAIFPVMKSVSGFILVVLALGFFTSA 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            IAE VRSG+ A+PRGQ  A +ALG T  +  R VLLP A R IIPPLTS+ +N+ KNSS
Sbjct: 116 RIAEQVRSGIQALPRGQRYAGMALGFTTAQYYRYVLLPMAFRIIIPPLTSETMNIFKNSS 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +A AV   +L         +T + IEI L    +Y+  +  I   M  +  +  +
Sbjct: 176 VAFAVSVTELTMFAMQAQEETSRGIEIYLAVTGLYVISAFAINRIMAFIEKRARV 230



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-NKLVAWICRVYVEVFRNIPPL 142
           +Y   +L  +  T  +A   ++ A + G+++G  R    NK +      +VE+FRNIP L
Sbjct: 20  TYLQWMLSAWGWTVSVALLALVIALVAGSVIGTIRTLPDNKFLVGFGNAWVELFRNIPLL 79

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           V IF  Y  V ++ P+   
Sbjct: 80  VQIFLWYHVVPAIFPVMKS 98


>gi|300362120|ref|ZP_07058297.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
 gi|300354739|gb|EFJ70610.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus gasseri JV-V03]
          Length = 216

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 19/230 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            + +  +        L    +T+  +      SF+LG+V         ++     G    
Sbjct: 2   ENFIHAYSWINIRFLLQGLWVTIYVSLISIALSFILGLVFGFIRYVKIKYLSTIVG---- 57

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                 F+I  +  L L+ + +  +F  P L          V+   ++  IAL  +  A 
Sbjct: 58  ------FVIDIIRNLPLLLIIFFTYFGLPEL--------GIVTNPTVASIIALVVFEGAM 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEIVRSG+ AV  GQME A + G+T+ +A   V++PQA+  +IP L SQ+++L+K++SL
Sbjct: 104 LAEIVRSGIAAVDPGQMEGARSNGMTYMQAMYHVIIPQALNKMIPSLLSQFVSLVKDTSL 163

Query: 341 AVAVGFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           A  +   +L+     I +Q T   I + +I   +Y  +   +++    L 
Sbjct: 164 ATIIVLPELLFHAQIIYSQNTTYLIPMYVIIAIMYFIVCFSLSMIAKHLQ 213



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 35/76 (46%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T +++   +  + I+G + G  R    K ++ I    +++ RN+P 
Sbjct: 9   SWINIRFLLQGLWVTIYVSLISIALSFILGLVFGFIRYVKIKYLSTIVGFVIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           L++IFF Y  +  +  
Sbjct: 69  LLIIFFTYFGLPELGI 84


>gi|321312471|ref|YP_004204758.1| sulfur-containing amino acid ABC transporter permease [Bacillus
           subtilis BSn5]
 gi|320018745|gb|ADV93731.1| sulfur-containing amino acid ABC transporter (permease) [Bacillus
           subtilis BSn5]
          Length = 235

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 3/231 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +     T+     + V   V G +++L    + R F  K   A    Y+
Sbjct: 1   MQFDFPFIVSAMKEMVKTIPLTLMMAVLPIVFGFLVAL-GNIIVRIFRIKGLVACSRFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAE 283
           S F       L ++ +   +      +  F  +G S    P  M + +ALS    A++ E
Sbjct: 60  SFFRSTPA-ILHIMLIYLGIPPVADQVSSFFHLGWSANEIPVSMFVIMALSLTAGAYLTE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSG++A+  GQ+EAA ++GLTH +  R V+LPQA+   IP  T+  +  L  +S+A  
Sbjct: 119 IIRSGILAMDTGQVEAAYSIGLTHSQTFRRVILPQALMVSIPNFTNLGIGFLHTTSIAAI 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           V   ++      + +     +E  +    IY  L++++      L  K A 
Sbjct: 179 VAVPEITGTATIVASDNYAFLEAFIGAAIIYWVLTLILESVNGVLERKAAR 229


>gi|218679442|ref|ZP_03527339.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 215

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 13/215 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F  S   G +L+L    + R    +        YI  F+  G P L+ + L +    
Sbjct: 2   LILFSLSIFFGGLLALVIVSM-RVSGNRVLSGFAKGYI--FVFRGSPLLIQMFLVFY--- 55

Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
               LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EAA +
Sbjct: 56  ---GLGQFGVIRYSFLWPFLREPMVCAILSLALCTAGYTAEIFRGGIRAVSPKEIEAARS 112

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G++     R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+QT +
Sbjct: 113 IGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQTYR 172

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +E+ L    IYL L+ +I   M  L   ++   +
Sbjct: 173 TMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRR 207


>gi|282899901|ref|ZP_06307862.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195171|gb|EFA70107.1| Amino acid ABC transporter, permease protein, 3- TM region protein,
           His/Glu/Gln/Arg/opine [Cylindrospermopsis raciborskii
           CS-505]
          Length = 340

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 19/247 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV-FSFVLGIVLSLFAT 205
            L    L    I    +   FG+      L    L     A + +  SF LG++L+L   
Sbjct: 108 LLAPIWLLTFIITIWLLGGGFGLQSVPTNLWNGLLLTLLMAFVSIALSFPLGVLLAL--- 164

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R+      +   +LYI          L LI + +      P+     F+        
Sbjct: 165 --GRNSELPVIRWFSILYIELVR-----GLPLIGILFIAQVMLPL-----FLPADWRLDR 212

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +     L  ++AA++AE VR GL ++P+GQ EAA ALGL       LV+LPQA+R++IP
Sbjct: 213 LVRGVAGLVLFSAAYMAENVRGGLQSIPKGQFEAARALGLNTFLLLILVVLPQALRAVIP 272

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIA 382
            +  Q++ L K++SL   VG  +L  +  +I+ Q    G+ +E+ +    +Y      ++
Sbjct: 273 TIVGQFIGLFKDTSLLSLVGLVELTGIARSILAQPQFLGRYMEVYIFIGAVYWLFCYSMS 332

Query: 383 LFMNRLN 389
           L   RL 
Sbjct: 333 LAARRLE 339


>gi|259909119|ref|YP_002649475.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae
           Ep1/96]
 gi|224964741|emb|CAX56258.1| Glutamate/aspartate transport system permease [Erwinia pyrifoliae
           Ep1/96]
 gi|283479147|emb|CAY75063.1| putative glutamate/aspartate ABC transport system, inner membrane
           component [Erwinia pyrifoliae DSM 12163]
          Length = 225

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI   + V GI+       + R    K       +Y
Sbjct: 1   MYQFDWSTIVPNLPWLWNGMVITLKITFTAIVFGIIWGTLL-AVMRLSSFKPVSWFAKIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPGFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGILSIARGQGNAALALGMTQWQSMQLIVLPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI    G  IE++L    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLLVSYLKKK 222



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 39/66 (59%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T  + F+ ++   I GTL+   RLS+ K V+W  ++YV +FR++P ++V+ +
Sbjct: 15  WLWNGMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPVSWFAKIYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLVVP 80


>gi|239815856|ref|YP_002944766.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802433|gb|ACS19500.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 221

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 13/229 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F          F    +     + + S V  I+  L A  L R +     + L + YI
Sbjct: 1   MEFDFSPIADNWRFFASGLGVTVALSLISAVTSILAGL-AIALLRLYGPGWLRRLLVFYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            +  +  +P LV++     ++F  P+L  F F         F +  IAL+ + AA+ AE+
Sbjct: 60  DS--MRAIPVLVVLV---WMYFAFPLLVGFTF-------APFWAAVIALTLHIAAYAAEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ ++  GQ  AA+ALG++  +  R VLLPQA   ++P   S     +K++++A  +
Sbjct: 108 IRAGIESIRPGQTRAALALGMSRAQLLRKVLLPQATIRMLPAFGSILTIAIKDTAIATVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +L+    T+  Q+ + +E+    M  Y ++   +   ++RL  ++A
Sbjct: 168 AVPELMHRAETVAGQSYRPVEVFTAVMVAYFAILFPVTRGIDRLYHRVA 216



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 32/87 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++  +        G   T  L+    + + + G  +   RL     +  +   Y++  R
Sbjct: 4   DFSPIADNWRFFASGLGVTVALSLISAVTSILAGLAIALLRLYGPGWLRRLLVFYIDSMR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIV 164
            IP LVV+ ++Y +   ++        
Sbjct: 64  AIPVLVVLVWMYFAFPLLVGFTFAPFW 90


>gi|330951201|gb|EGH51461.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 215

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R   +   +    LYI  F   G P L+ + L +           F           + +
Sbjct: 41  RTSEKSGPRVTAKLYIELF--QGTPLLMQLFLVF-----------FGVALMGMNISPWAA 87

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ +T+A++AEI R  + ++ +G+ EA+ +L LT  +  R V+LPQA+R  + P  
Sbjct: 88  AALALTLFTSAYLAEIWRGCVESISKGRWEASASLALTPFEQMRYVILPQALRIAVAPTV 147

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K +++   +GF +L   G  + N T +   +       Y  L   ++L    L
Sbjct: 148 GFSVQVVKGTAVTSIIGFTELTKTGSMLANATFEPFMVYGFVALGYFILCYPLSLCARHL 207

Query: 389 NAKI 392
             ++
Sbjct: 208 ERRL 211



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 35/107 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+G   T  L+    I   +IG L+   R S         ++Y+E+F+  P L
Sbjct: 6   WDIVRNLLIGLQWTVALSLVAFIGGGLIGLLIMGMRTSEKSGPRVTAKLYIELFQGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +F ++  V  +             + L               +  
Sbjct: 66  MQLFLVFFGVALMGMNISPWAAAALALTLFTSAYLAEIWRGCVESIS 112


>gi|325278185|ref|ZP_08143684.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324096679|gb|EGB95026.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 236

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 4/184 (2%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
            H    + L   Y+  F   G P L  + L Y          Q   +        F +L 
Sbjct: 54  SHNLLLQRLAAGYVYFF--RGSPLLAQLFLLYYGLGSFKSFWQEVGLWWFFREAWFCTL- 110

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI R  L+AV  GQ EAA AL L        V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEIFRGSLMAVAPGQYEAARALNLKRSTTFFKVILPQSLLVAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K S++A  V   DL+ V     +++    +I L    +YL +  ++   +  L A
Sbjct: 171 LILMIKASAIASLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVEVVRRLLKHLEA 229

Query: 391 KIAL 394
           ++  
Sbjct: 230 RLGR 233



 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 60/200 (30%), Gaps = 7/200 (3%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    + G + T  L         ++G L+   RLS N L+  +   YV  FR  P L
Sbjct: 17  ERYGPRFVDGLLVTAKLVAISFSLGALLGLLLALARLSHNLLLQRLAAGYVYFFRGSPLL 76

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
             +F LY  + S         +  F        L   TL             ++ +    
Sbjct: 77  AQLFLLYYGLGSFKSFWQEVGLWWFFREAWFCTLLAFTLNTAAYQAEIFRGSLMAVAPGQ 136

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGL--PTLVLIALKYQLH-----FDKPVLGQFN 255
           +    + +    T     +L  S  +  G     L+L+     +      +D   + +  
Sbjct: 137 YEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVTKLA 196

Query: 256 FIGGSTVSPEFMSLYIALSC 275
           F           +  + L  
Sbjct: 197 FSRSFDFQIYLWAAVLYLVI 216


>gi|159037030|ref|YP_001536283.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora arenicola CNS-205]
 gi|157915865|gb|ABV97292.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora arenicola CNS-205]
          Length = 325

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 9/255 (3%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
            +  + +           FG+     G+ F            + S V+G +L++   +L 
Sbjct: 47  GQLSMELWGPLIDPGNENFGLVWERLGIGFKNTLTAA-VLAILTSLVVGTLLAVLRIQLK 105

Query: 209 RHFHEK-TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI-----GGSTV 262
                + TG + PL Y+   L   L   V+     ++    PV+    F+          
Sbjct: 106 GLAQRRYTGLSAPLAYLLRGLNLTLS--VVTRFCVEVFRGLPVVITIFFVARGFPEFGVT 163

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                 L I L+ Y +  IAEI+RSG+  +P GQ EAA A+GL+  + TR+++LPQA R 
Sbjct: 164 FDTLWYLVIGLTIYNSVVIAEILRSGMEGLPGGQAEAAAAIGLSPLQTTRMIMLPQAFRI 223

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P L SQ + +LK++SL   + + + +++G  II      I++  +   +++ ++  ++
Sbjct: 224 MLPALISQLVVVLKDTSLGFIISYEETLNIGKQIIGVLDNPIQVYTVLAVLFIVVNYSLS 283

Query: 383 LFMNRLNAKIALKEK 397
                +  +++   +
Sbjct: 284 KLAQAVQNRLSRGRR 298


>gi|219847285|ref|YP_002461718.1| polar amino acid ABC transporter inner membrane subunit
           [Chloroflexus aggregans DSM 9485]
 gi|219541544|gb|ACL23282.1| polar amino acid ABC transporter, inner membrane subunit
           [Chloroflexus aggregans DSM 9485]
          Length = 410

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 22/267 (8%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R I   +    +   +LS   +            +  +      LT+       V SF L
Sbjct: 158 RQIRATLRWPLIIAWILSYPAVILILRGGLGLPIVETKLWGGLMLTLLLAISGIVLSFPL 217

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++L+L      R       +   +LYI       L T++ +            L    F
Sbjct: 218 GVLLAL-----GRRSSLPVIRTFCVLYIELIRGVPLVTVLFMG----------ALLLPLF 262

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G       +   +A++ ++AA++AE VR GL A+PRGQ+EAA ALGL   + T L+ L
Sbjct: 263 LPGGESIDALVRATVAVTLFSAAYLAENVRGGLQAIPRGQVEAARALGLNVVQTTLLITL 322

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-------GQAIEIILI 369
           PQA+R+++P L  Q++ L K++SL V +G  DL+     I+ Q        G   E  L+
Sbjct: 323 PQALRAVVPVLVGQFIALFKDTSLVVIIGLVDLLGAAQNIVGQPQWLGTPGGVWRETFLV 382

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
              +Y   S  ++    R+  +IA   
Sbjct: 383 IAAVYWLFSFTMSRVSKRIEDQIARSR 409


>gi|71083899|ref|YP_266619.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
 gi|91763030|ref|ZP_01264994.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
 gi|71063012|gb|AAZ22015.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
 gi|91717443|gb|EAS84094.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
          Length = 230

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 2/211 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V + ++G + SL  T L +  + K    +   Y +         ++ +      
Sbjct: 21  MTIAVAVTAMLIGFLFSLIFTPL-KLSNNKFLNFIGNTYTTVIRGVPELLVIYLFFFGGS 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                V   F +     ++  F++  +A+   + A+  E+ R  + ++ +GQ EAA  LG
Sbjct: 80  GAIMYVASIFGYFEYIEIN-AFITGSVAIGIISGAYSTEVFRGAIQSIDKGQFEAAKVLG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++       ++LPQ +R  IP L++ +   LK++SL    G  +++         T   +
Sbjct: 139 VSKFVQFYKIILPQMLRLAIPNLSNVWQITLKDTSLISVTGLVEIMRQSYIAAGSTRDPL 198

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                   +YL L+ +    +NRL  K +  
Sbjct: 199 FFYCFAAVLYLMLTFLSMKLINRLEVKYSRG 229


>gi|77407242|ref|ZP_00784203.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77174148|gb|EAO77056.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 214

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 10/167 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K GK +  +Y+  F     P LV +   Y         G      G  +   F +  
Sbjct: 55  SKSKVGKLISRIYVEVF--QNTPLLVQMVFVYY--------GLAIISNGHVMISAFFTAV 104

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +  Y  A+I+E++RSG+ AVP+GQ EAA+A G T  +  +L++LPQA+R+I+PP+T+Q
Sbjct: 105 LCVGLYHGAYISEVIRSGIEAVPKGQTEAALAQGFTANQTMQLIILPQAVRTILPPMTNQ 164

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            +NL+KN+S    +  AD++ V       T   I        +YL  
Sbjct: 165 VVNLIKNTSTVAIISGADIMFVAKAWAYDTTNYIPAFAGAAILYLVF 211



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++      GF+ T  ++F  ++ A I+G L G    S +K+   I R+YVEVF+N P LV
Sbjct: 19  NHFDLFFKGFLYTLGISFGALLLALILGILSGGLSTSKSKVGKLISRIYVEVFQNTPLLV 78

Query: 144 VIFFLYKSV 152
            + F+Y  +
Sbjct: 79  QMVFVYYGL 87


>gi|303247502|ref|ZP_07333774.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
 gi|302491198|gb|EFL51090.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio fructosovorans JJ]
          Length = 237

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 111/222 (50%), Gaps = 5/222 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L +    +   A + + +  LG++L +    ++  +  K  +     YI  F   G+
Sbjct: 12  WEALPYILGGIWWTAGLIIGAMALGLLLGIPL-AVAHVYGGKPMRRFVSAYIWLF--RGI 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + L Y        L Q   +    +S  F+S  + L   +AA+ ++I R  + ++
Sbjct: 69  PILVQLYLFYFGIMAY--LSQLPALSFLPLSSGFLSAVLVLGLTSAAYQSQIFRGAIQSL 126

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ++AA ALG++   A R ++LPQA+R  IP  +++Y  LLK+S+LA  +G  +++S 
Sbjct: 127 PPGQLKAARALGMSDAVAIRAIILPQALRLAIPAWSNEYSILLKDSALAFTIGVLEVMSR 186

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++   T Q + + L+   ++  L+      + RL AK+ +
Sbjct: 187 TRSVAALTHQPLPLSLLAGALFFFLTWAGIKALKRLEAKVRI 228



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 38/103 (36%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G   T  L    M    ++G  +    +   K +      Y+ +FR IP LV ++ 
Sbjct: 17  YILGGIWWTAGLIIGAMALGLLLGIPLAVAHVYGGKPMRRFVSAYIWLFRGIPILVQLYL 76

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            Y  +++ L        LP      +  L     +    ++IF
Sbjct: 77  FYFGIMAYLSQLPALSFLPLSSGFLSAVLVLGLTSAAYQSQIF 119


>gi|290476189|ref|YP_003469089.1| glutamate/aspartate ABC transporter membrane protein [Xenorhabdus
           bovienii SS-2004]
 gi|289175522|emb|CBJ82325.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Xenorhabdus bovienii SS-2004]
          Length = 224

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 5/186 (2%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            + R    K       LY++ F       LV++ L + L    P L Q            
Sbjct: 42  AMMRLSSIKILSWFATLYVNLFRSVP---LVMVLLWFYL--IVPNLLQNVLGISPRTDIR 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ RL++LPQA R++IP
Sbjct: 97  LISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTHMQSMRLIILPQAFRAMIP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q + L +++SL   +  AD       I  + G  IE+IL    +Y  +S   ++ +
Sbjct: 157 LLLTQGIVLFQDTSLVYVLSLADFFRTATNIGERDGTQIEMILFAGVVYFVISFAASMLV 216

Query: 386 NRLNAK 391
           N L  +
Sbjct: 217 NYLKKR 222



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 39/67 (58%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +    +I     GTL+   RLS+ K+++W   +YV +FR++P ++V+ + 
Sbjct: 16  LLNGLVITAKITVIAIIIGIAWGTLLAMMRLSSIKILSWFATLYVNLFRSVPLVMVLLWF 75

Query: 149 YKSVLSV 155
           Y  V ++
Sbjct: 76  YLIVPNL 82


>gi|282599865|ref|ZP_06257391.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
 gi|282567427|gb|EFB72962.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 175

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 86/156 (55%), Gaps = 8/156 (5%)

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L +  +F  PV+         T  P   ++  AL+  T+A++A  V++G++A+ +GQ  
Sbjct: 1   MLIFWTYFLLPVVLG-------TEIPGITAVVCALALITSAYLAHAVKAGILAIGKGQWH 53

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  VG A+L  +   + N
Sbjct: 54  AGMSLGFNRWQVLGYIVLPQALRMMVPSFINQWVALIKDTSLAYIVGVAELSFLATQVNN 113

Query: 359 QTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     +E+ L   FIY  + + + +  N++  K++
Sbjct: 114 REMVYPLEVFLFVAFIYFVMCLSVEIIANQIAKKLS 149


>gi|163857136|ref|YP_001631434.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii DSM 12804]
 gi|163260864|emb|CAP43166.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii]
          Length = 197

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 13/185 (7%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +  +   L Y+  F   G   LV +   Y       VL  F         P      
Sbjct: 26  SPHRWVRWPALAYVEVF--RGTSALVQLFWFYY------VLPLFGL-----KLPAVTVGI 72

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L+    A+ AE+VR  ++AV  GQ EAA+AL +T  +  R ++LPQA  +++PP  + 
Sbjct: 73  VVLAANAGAYGAEVVRGAILAVAPGQREAAVALNMTPGRIMRRIVLPQAFPAMLPPAGNL 132

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + LLKN++L   +   DL   G  +  +T +  E+ ++ + +Y +++++I   +  L  
Sbjct: 133 LIELLKNTALVSLITITDLTFRGQMLRAETLRTTEVFILLLLLYFAVALVITAGIRLLER 192

Query: 391 KIALK 395
           +  ++
Sbjct: 193 RFRVR 197


>gi|316934240|ref|YP_004109222.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris DX-1]
 gi|315601954|gb|ADU44489.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris DX-1]
          Length = 501

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 18/257 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FAT 205
           ++++ + +       V+   + L+  GL      M     + +   V GIV S+    A 
Sbjct: 254 WRALATTVGAFVGIAVVIAALRLDRGGLPIVDTRMWGGLLVTLVVSVTGIVASMPVGIAL 313

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R       +   + +I  +    L T V+    Y L           F+ G+     
Sbjct: 314 ALGRRSTIPLIRIFSVAFIEFWRGVPLIT-VMFFATYMLPL---------FLPGNFTIDN 363

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T L++LPQA+R +IP
Sbjct: 364 LVRVLIGIALFAGAYNAEVIRGGLNAIPRGQAEAASALGLSYWKTTGLIVLPQALRHVIP 423

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-----GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            L + ++ L K++SL   V   DL+            +              IY      
Sbjct: 424 GLVNSFIALFKDTSLVSIVALFDLLGQLRAAFADPTWSTPTTLFTGFAFTGLIYFVFCFG 483

Query: 381 IALFMNRLNAKIALKEK 397
           ++ +   +  ++    +
Sbjct: 484 MSRYSLSVEHRLNAHRR 500


>gi|283784425|ref|YP_003364290.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
 gi|282947879|emb|CBG87441.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           rodentium ICC168]
          Length = 246

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWNGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSGI 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMTLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWNGFQVTVALSITAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R   N+ ++ I  +YVE+FRN+P +V  F  Y  V  +LP 
Sbjct: 53  LRTVPNRFLSGIGTLYVELFRNVPLIVQFFTWYLVVPELLPE 94


>gi|291618214|ref|YP_003520956.1| HisQ [Pantoea ananatis LMG 20103]
 gi|291153244|gb|ADD77828.1| HisQ [Pantoea ananatis LMG 20103]
          Length = 228

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +L ++L L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVLLAVILGLIG-AGAKLSRNRLLSLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 72  LQIALNHLTDALGLTQFDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTGSQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  LN +  +  K+
Sbjct: 192 YFAIVAGVIYLVFTTLSNGILWWLNRRYTVGVKR 225



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  IL G + T  LA S ++ A I+G +    +LS N+L++ I   Y  + R +P LV+
Sbjct: 5   YSDVILKGTLVTLELALSSVLLAVILGLIGAGAKLSRNRLLSLIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|261406921|ref|YP_003243162.1| polar amino acid ABC transporter inner membrane subunit
           [Paenibacillus sp. Y412MC10]
 gi|261283384|gb|ACX65355.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. Y412MC10]
          Length = 236

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 11/230 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     + T   I   S   G ++ L A   +R +       +   Y++   I G 
Sbjct: 9   WTAFVNLLSAIPTTLLITAVSVTAGFMIGLIA-AFARIYKVPVLSQIATAYVTF--IRGT 65

Query: 233 PTLVLIALKYQLHFDKPVLG-----QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P L  + L Y   F  PVL      Q  +   S+  P     +I+ S    A+++E++RS
Sbjct: 66  PMLTHLLLIY---FGLPVLVDALSAQMGWGFKSSSIPMIWFAFISFSITAGAYMSEVIRS 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL+AV RGQ+EAA ++G+T  +A R ++ PQA+   +P L++  + +L  S+LA  V   
Sbjct: 123 GLLAVNRGQLEAAYSIGMTTWQALRRIVFPQALAVSLPNLSNSVIGMLHGSTLAFTVSVV 182

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           D+ +    + +   +  E  L    I+  L+++I         +I L  +
Sbjct: 183 DINAQAQIVASTNWKFFESYLAAAAIFWGLTLLIERLTAIFERRINLYNR 232



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 29/97 (29%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +    +    +IG +    R+    +++ I   YV   R  P L  +  +
Sbjct: 15  LLSAIPTTLLITAVSVTAGFMIGLIAAFARIYKVPVLSQIATAYVTFIRGTPMLTHLLLI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
           Y  +  ++      +   F                 T
Sbjct: 75  YFGLPVLVDALSAQMGWGFKSSSIPMIWFAFISFSIT 111


>gi|167033327|ref|YP_001668558.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166859815|gb|ABY98222.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 236

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 4/186 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + +   Y+  F   G P L  + L Y          Q   +        F +
Sbjct: 52  RMSRSLVLQRMAAGYVYFF--RGSPLLAQLFLLYYGLGSLKGFWQDVGLWWFFREAWFCT 109

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L +A +  TAA+ AEI R  L+AV  GQ EAA AL L        V+LPQ++   I PL 
Sbjct: 110 L-LAFTLNTAAYQAEIFRGSLMAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLG 168

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ + ++K S++A  V   DL+ V     +++    +I L    +YL +  ++   +  L
Sbjct: 169 NELILMIKASAIASLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHL 227

Query: 389 NAKIAL 394
             ++  
Sbjct: 228 EGRLGR 233



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 7/200 (3%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    L G + T  L         ++G L+   R+S + ++  +   YV  FR  P L
Sbjct: 17  ERYGPRFLDGLLVTAKLVAISFTLGAVLGLLLALARMSRSLVLQRMAAGYVYFFRGSPLL 76

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
             +F LY  + S+        +  F        L   TL             ++ +    
Sbjct: 77  AQLFLLYYGLGSLKGFWQDVGLWWFFREAWFCTLLAFTLNTAAYQAEIFRGSLMAVAPGQ 136

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGL--PTLVLIALKYQLH-----FDKPVLGQFN 255
                + +    T     +L  S  +  G     L+L+     +      +D   + +  
Sbjct: 137 HEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVTKLA 196

Query: 256 FIGGSTVSPEFMSLYIALSC 275
           F           +  + L  
Sbjct: 197 FSRSFDFQIYLWAAVLYLVI 216


>gi|158423462|ref|YP_001524754.1| polar amino acid ABC transporter permease [Azorhizobium caulinodans
           ORS 571]
 gi|158330351|dbj|BAF87836.1| polar amino acid uptake family ABC transporter permease protein 2
           [Azorhizobium caulinodans ORS 571]
          Length = 290

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 12/263 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           +R      V       V++       +        +  +           N  I V S  
Sbjct: 34  WRITLLHAVGIVGIGLVVAGGAHAQGAPGQLSAFGVIWKWFPLLMWGFGFNILISVLSMA 93

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG V  L    L+        +         F       ++L    + + F      QF 
Sbjct: 94  LGTVAGLGLG-LAAISQSAPLRQTAWGATQFFR-NAPWLVLLFFAMFMIPF------QFT 145

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +G +   P+++   I  +    A +AEIVR  + ++P GQ EAA +L  + R+   +++
Sbjct: 146 ILGKTIPFPDWVKAVIGFALPVMANMAEIVRGAVKSLPSGQWEAAESLAFSRRQTLWMII 205

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-LVSVGGTIINQTGQA---IEIILIWM 371
           LPQ ++ ++PP  + Y  +   +  A  VG  + L  +      + G+      +    M
Sbjct: 206 LPQCVKRMLPPWMNLYTLVTMATVQASIVGVTEMLTLIAQVHAAEGGRPDLLAPLYGFAM 265

Query: 372 FIYLSLSIMIALFMNRLNAKIAL 394
             +      I  F   L  +  L
Sbjct: 266 LCFFVYCYPIERFTLYLERRFQL 288



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 34/87 (39%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   ++ GF     ++   M   T+ G  +G   +S +  +        + FRN P L
Sbjct: 71  WKWFPLLMWGFGFNILISVLSMALGTVAGLGLGLAAISQSAPLRQTAWGATQFFRNAPWL 130

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V++FF    +     I   +I  P  +
Sbjct: 131 VLLFFAMFMIPFQFTILGKTIPFPDWV 157


>gi|301329183|ref|ZP_07222176.1| putative ATP synthase F0, A subunit [Escherichia coli MS 78-1]
 gi|300844488|gb|EFK72248.1| putative ATP synthase F0, A subunit [Escherichia coli MS 78-1]
          Length = 259

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 18/260 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVL 200
           L+  FF  + +             PFG       +          +   ++ +F++G   
Sbjct: 4   LLPSFFWSRFMSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFF 63

Query: 201 SLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +  T  +R        + +  + +PL+         +P L+   +      +     QF
Sbjct: 64  GILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQF 123

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                      F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R V
Sbjct: 124 -----------FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYV 172

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           LLP A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y
Sbjct: 173 LLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAY 232

Query: 375 LSLSIMIALFMNRLNAKIAL 394
           + ++  I L M  +  K+ L
Sbjct: 233 VLINAFIMLVMTLVERKVRL 252



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P +V
Sbjct: 33  TYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIV 92

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
             F  Y  +  +LP      
Sbjct: 93  QFFTWYLVIPELLPEKIGMW 112


>gi|260438223|ref|ZP_05792039.1| amino acid ABC transporter, permease protein [Butyrivibrio
           crossotus DSM 2876]
 gi|292809415|gb|EFF68620.1| amino acid ABC transporter, permease protein [Butyrivibrio
           crossotus DSM 2876]
          Length = 228

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 16/212 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI---STFLIFGLPTLVLIALKYQ 243
            K+F+ + +  I L L  T  S      T K  PL YI     ++I G P ++ + + + 
Sbjct: 23  LKLFIVTLIGAIPLGLIITFGS------TSKFPPLKYITKIFVWIIRGTPLMIQLLIIFY 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P L   N + G   S  FM+  +A     A + +EI R G+ ++P GQ EA + L
Sbjct: 77  F----PGLVLNNPVWGGGESGRFMAAAVAFIINYACYFSEIYRGGIESIPVGQDEAGLVL 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           G+   +    V L Q ++ I+PP++++ + L+K++SLA  +   +++  G   +  +   
Sbjct: 133 GMKKSQIFFKVKLKQMIKRIVPPMSNEIITLVKDTSLARIIALQEIIWAGQAFMKGSQGI 192

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             AI  +      YL    ++ + + RL  K+
Sbjct: 193 YGAIWPLFFTAVYYLVFVGLLTILLGRLEKKL 224



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A+  GF+ T  L    +I A  +G ++  G  S    + +I +++V + R  P ++ + 
Sbjct: 13  KALNTGFLQTLKLFIVTLIGAIPLGLIITFGSTSKFPPLKYITKIFVWIIRGTPLMIQLL 72

Query: 147 FLYKSVLSVLPIPDH 161
            ++     VL  P  
Sbjct: 73  IIFYFPGLVLNNPVW 87


>gi|138895922|ref|YP_001126375.1| amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267435|gb|ABO67630.1| Amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
          Length = 206

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 6/188 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R    +  +    +Y+  F   G   +V +   + +++  P+L +            F
Sbjct: 19  LGRLAKSRWIRWTTNIYVEFF--RGTSLVVQL---FWVYYALPMLAKAIPFLPPLNLSSF 73

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  IA+S    A+++E VRS ++AV RGQ EAAIAL +T  +  RLV+LPQA+R ++P 
Sbjct: 74  WAGVIAVSLNYGAYVSETVRSCILAVDRGQHEAAIALNMTRFQRMRLVILPQAVRMMLPD 133

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFM 385
             +  + +LK++SL   +G  D+   G    N      I +  + +  Y  +++ +    
Sbjct: 134 FGNNLIQMLKSTSLVSLIGLTDITYAGMVFRNSNIDLGILVFAMMLVFYFLIALPLIWLT 193

Query: 386 NRLNAKIA 393
            R    ++
Sbjct: 194 RRAERAVS 201


>gi|119946456|ref|YP_944136.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119865060|gb|ABM04537.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 224

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 91/231 (39%), Gaps = 7/231 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +F+N        L              L I + +   R S ++  K        + 
Sbjct: 1   MDFSIFINEYQFYLAGLWTTVWLVALSLLLGLFIAVPVGLLRSSENWLIKGP-----AWS 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +   G P LV + L Y       ++ +            +    +A +  T A+ AEI
Sbjct: 56  FMYFFRGTPLLVQLFLIYYGAAQFDLIHETWL--WHYFQEAWFCALLAFTLNTGAYTAEI 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  +  +P+ ++EAA A G++ R+  R + LP ++R  +P  +++ + ++  S++A  V
Sbjct: 114 IRGVISTMPKSELEAAKAYGMSERQILRRITLPNSLRRALPAYSNEIIFMIHGSAIAGIV 173

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              D+      +  +     E       +Y+ L+  +     +  ++ + +
Sbjct: 174 TIVDITGAARVVNARYYAPFEAYFGAALLYMCLTFSVIFAFKKWESRYSTR 224



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 37/105 (35%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L G   T WL    ++    I   VG  R S N L+      ++  FR  P LV +
Sbjct: 10  YQFYLAGLWTTVWLVALSLLLGLFIAVPVGLLRSSENWLIKGPAWSFMYFFRGTPLLVQL 69

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           F +Y        I +  +   F        L+F   T    A+I 
Sbjct: 70  FLIYYGAAQFDLIHETWLWHYFQEAWFCALLAFTLNTGAYTAEII 114


>gi|322831660|ref|YP_004211687.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321166861|gb|ADW72560.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 217

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 88/224 (39%), Gaps = 13/224 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF--LI 229
                 +  +     A  +     L   +      L       T +  P L++  +  L 
Sbjct: 1   MMTFTDWDIVRNLLLAARWTLLLSLTAFIGGTLVTLPLLLLRLTKRRWPTLFVRLYSELF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +           F           + +  +AL+ YT+A++ +I    +
Sbjct: 61  QGTPLLMQLFLAF-----------FGLGLFGINVSPWTAAALALTLYTSAYLVDIWSGSI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ EA+  LGL   +    V+ PQA+R  I P     + ++K ++LA  +GF +L
Sbjct: 110 AALPKGQWEASRCLGLNFGQTLWRVITPQALRIAIAPTVGFSVQVVKGTALASIIGFVEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              G  + N T +  ++  +    Y  +   ++ +   L   + 
Sbjct: 170 TKAGTMLNNVTYEPFKVFGLVALGYFLMCYPLSRYSQHLEKSLR 213


>gi|171779323|ref|ZP_02920287.1| hypothetical protein STRINF_01168 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281940|gb|EDT47371.1| hypothetical protein STRINF_01168 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 213

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + V S  +G +L+            K  + L  LY+  +++ G P L
Sbjct: 12  LDGAAVTLQVFCIVIVLSIPIGAILAFLMQ-----IKFKPLQWLLTLYV--WIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                 V     +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGVVMDRMPAAILAFTLNYAAYFAEIFRGGIAAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +    ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLNQLQTIHYIILPQVFKIVLPSVFNEIINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + +   IYL +  ++ L   +   K 
Sbjct: 174 AANRDA-TLAPMFVAGAIYLLMIGIVILISKQTEKKF 209



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +  IG ++        K + W+  +YV + R  P L+ + F 
Sbjct: 11  LLDGAAVTLQVFCIVIVLSIPIGAILAFLMQIKFKPLQWLLTLYVWIMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV  + D          LN              A 
Sbjct: 71  YYVLPSVGVVMDRMPAAILAFTLNYAAYFAEIFRGGIAAI 110


>gi|149907743|ref|ZP_01896490.1| arginine ABC transporter, permease protein [Moritella sp. PE36]
 gi|149809413|gb|EDM69342.1| arginine ABC transporter, permease protein [Moritella sp. PE36]
          Length = 221

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 14/225 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +           + T  +I  FS + G ++++  T L+          L    I  F   
Sbjct: 1   MTLDHFWLLFNGLSTTLEITFFSLLFGSMIAVLLT-LAMINKIPGLNLLARAIILVFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEIVR 286
           G P L+ I L Y          QF +I  S +        +   IALS  TAA+ + + +
Sbjct: 58  GTPLLIQIFLVYSGP------SQFEWIKDSFLWDYLRQAKICAIIALSFNTAAYSSLLFK 111

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +VPRG+ +A  ALG+  R+    V++P A+R ++P  +++ + +LK +SLA ++  
Sbjct: 112 GAIESVPRGEWDACNALGMNRRQTLA-VIVPHAIRRVLPSYSNEVILVLKGTSLASSITI 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            D++     I  QT  A+        IYL ++ ++ L   +L  K
Sbjct: 171 MDVMGYANQINGQTYDALMAFSAAGIIYLGMNGILILIFKQLEKK 215


>gi|224371423|ref|YP_002605587.1| GltK2 [Desulfobacterium autotrophicum HRM2]
 gi|223694140|gb|ACN17423.1| GltK2 [Desulfobacterium autotrophicum HRM2]
          Length = 221

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 13/224 (5%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L +    +    +I V +   G+V  +    L R    +       +YI  F     
Sbjct: 7   YDNLGYMAGGLWLTFEIAVMAITGGLVWGILLG-LGRLSSIRLVYYPASIYIHFFR---- 61

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             + LI + + ++F  PV              E  ++ ++   Y AA+ AEI+R+G+ AV
Sbjct: 62  -GIPLILVIFWIYFLVPVFLG-------RSLGELPAVVLSFILYEAAYFAEIIRAGIQAV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ  A +A GL     T  V+LPQA+  ++P L +  + + +++SLA  +G  + +  
Sbjct: 114 PVGQKRAGLATGLRPWDLTVHVILPQALSKMVPALITHCVVVFQDTSLAYVIGLREFLRR 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +  +++E+ L    +Y  +  + +   + L  +   KE
Sbjct: 174 VNLVDAREARSVELYLFAACVYFIICTLGSFLGHYLEHRSKAKE 217



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF +A   +    + G L+G GRLS+ +LV +   +Y+  FR IP ++VIF++Y  
Sbjct: 16  GLWLTFEIAVMAITGGLVWGILLGLGRLSSIRLVYYPASIYIHFFRGIPLILVIFWIYFL 75

Query: 152 VL 153
           V 
Sbjct: 76  VP 77


>gi|223939003|ref|ZP_03630888.1| polar amino acid ABC transporter, inner membrane subunit [bacterium
           Ellin514]
 gi|223892299|gb|EEF58775.1| polar amino acid ABC transporter, inner membrane subunit [bacterium
           Ellin514]
          Length = 264

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 110/248 (44%), Gaps = 13/248 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           + FF+   +++++       V     + +                +   + +       F
Sbjct: 25  LNFFIAFLLVALIFFFSFHQVNYHWNWSSIYKYRQKFFQGWVTTILISLASLGLSTCIGF 84

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L +       +    LYI   ++ G P LV I + + +  +              V 
Sbjct: 85  IFALGQRTRFLPFRYFSKLYIE--IVRGTPLLVQILIFFYVVANA-----------FRVE 131

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             ++   + LS ++ A+I+E++R+G+ +V + Q+E+A A+GLT  +  R V++PQA+R  
Sbjct: 132 NRYLVGILTLSFFSGAYISEVIRAGIESVGKSQIESARAIGLTRAQTYRYVIVPQAIRQS 191

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL  Q+++L+K+SSL   +  ++       + + T   +E  +     YL L++ I++
Sbjct: 192 LPPLAGQFVSLIKDSSLLSIISISEFTLNAQEVNSYTFSTLESYIPLAVGYLVLTLPISI 251

Query: 384 FMNRLNAK 391
           +   L  K
Sbjct: 252 WTRHLEQK 259



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 55  SNLSLGIGFLSERAGFEIDQGIVPYTSDSS----YATAILVGFVNTFWLAFSGMIPATII 110
             L+  I FL     F      V Y  + S    Y      G+V T  ++ + +  +T I
Sbjct: 23  RALNFFIAFLLVALIFFFSFHQVNYHWNWSSIYKYRQKFFQGWVTTILISLASLGLSTCI 82

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
           G +   G+ +      +  ++Y+E+ R  P LV I   +  V +   + + 
Sbjct: 83  GFIFALGQRTRFLPFRYFSKLYIEIVRGTPLLVQILIFFYVVANAFRVENR 133


>gi|167578033|ref|ZP_02370907.1| histidine transport system permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 237

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 4/225 (1%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYIST 226
           G +  N   S           +++    +G+   L     ++R    +       LY  T
Sbjct: 6   GQYWQNYLFSDGYRISGLAITLWLLVVSIGLGFGLAVPLAIARASRNRAVSGAVWLY--T 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++  G P  V + L Y   +   V+    ++  S          +A +    A+  EI  
Sbjct: 64  YVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLD-SFFRSAMNCTLLAFTLNECAYATEIFA 122

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA     
Sbjct: 123 GAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTATV 182

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 183 PDILKVTRDVNSATYASFQAYGIAAALYALIVFALIWVFRRMEAR 227



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    + G   T WL    +     +   +   R S N+ V+    +
Sbjct: 5   IGQYWQNYLFSDGYR---ISGLAITLWLLVVSIGLGFGLAVPLAIARASRNRAVSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|313618407|gb|EFR90430.1| arginine transport system permease protein ArtQ [Listeria innocua
           FSL S4-378]
          Length = 229

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 13/223 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIF 230
           N   +      +   AK  +  FV+ +V S+    +    +  K      +L I  +++ 
Sbjct: 16  NMDYIMEILPALLDGAKTTLLVFVVTLVCSIPLGAIVAVGNISKIAPLKFILNIYIWIMR 75

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   Y   +  P++          V     +++IA     AA+ AEI R G +
Sbjct: 76  GTPLLLQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFL 124

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+
Sbjct: 125 SIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLL 184

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G   +++    I ++L+   IYL+L+ ++ L   +L  + +
Sbjct: 185 RAGKIAMSRDVTLIPLVLVAA-IYLALTAILTLLFKQLEKRFS 226



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 23  ILPALLDGAKTTLLVFVVTLVCSIPLGAIVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 82

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 83  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 111


>gi|307747399|gb|ADN90669.1| glutamine ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni M1]
          Length = 233

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 14/237 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTG 216
           +   F +      L+   LT+  +    +FS ++G+   L +    +        + +  
Sbjct: 1   MDFDFILVQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL    FL + LP       K+ +H +  P L         T+ P F    + LS 
Sbjct: 61  RNTPLLIQLFFLYYALP-------KFNIHLEQIPPLDLICLSVEETLRPSFACAIVGLSF 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              +++AE +R+G  A+ + Q EA ++LG +       V+LPQA+   +P +++  + L+
Sbjct: 114 LGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLCYVILPQALAISMPSISANIIFLI 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K +S+   +   DLV++  ++ + T +  E++ +    YL + + ++  + +   ++
Sbjct: 174 KETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLD 90


>gi|148826213|ref|YP_001290966.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           PittEE]
 gi|229846208|ref|ZP_04466320.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           7P49H1]
 gi|148716373|gb|ABQ98583.1| arginine transport system permease protein [Haemophilus influenzae
           PittEE]
 gi|229811212|gb|EEP46929.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           7P49H1]
          Length = 227

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 6/227 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    LS     + T+  + V S ++   L+LF T L    ++   +A+ L      L  
Sbjct: 1   MFQEYLSVIVQGIPTSLLLTVVSLLIAFCLALFLTFLLSMENKWIKRAVNL---YLTLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y            +      +S  +    +AL+  +AA+  ++    + 
Sbjct: 58  GTPLLVQFFLIYAGP--GQFQWIIDSSLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K ++LA  +   D++
Sbjct: 116 AIPKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTALASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +      AI I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 175 GYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLAFER 221


>gi|121608890|ref|YP_996697.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121553530|gb|ABM57679.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 228

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 86/213 (40%), Gaps = 3/213 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S  + + L L      +    +    L   Y  + L+ G+P LV +   +  
Sbjct: 15  VTMTVALGSLAVAVALGLVGAA-CKLSGSRLLTLLAATY--STLVRGVPELVWLLFLFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                          +      ++    +     A++ E  R+ ++AVP GQ EA ++ G
Sbjct: 72  AQILINQTSATMGWQAVEIDPMLAGITTIGFIFGAYMTETFRAAIMAVPSGQAEAGLSFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    + LPQ +R  +P  ++ ++ L+K+++L   +G  DL+       + T  + 
Sbjct: 132 MSPLRVFWRITLPQMVRFALPSFSNNWMVLIKSTALVSVIGLNDLMHRAAMAKSATRDSF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              L+   +YL+++ +       L  + +   +
Sbjct: 192 GAYLVVCVVYLAITGVSIGVFRLLELRFSRGVR 224



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T  +A   +  A  +G +  A +LS ++L+  +   Y  + R +P LV + FL
Sbjct: 9   IAAGVTVTMTVALGSLAVAVALGLVGAACKLSGSRLLTLLAATYSTLVRGVPELVWLLFL 68

Query: 149 YKS 151
           +  
Sbjct: 69  FYG 71


>gi|327394608|dbj|BAK12030.1| histidine transport system permease protein HisQ [Pantoea ananatis
           AJ13355]
          Length = 228

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S +L ++L L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVLLAVILGLIG-AGAKLSRNRLLSLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 72  LQIALNHLTDALGLAQFDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTGSQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  LN +  +  K+
Sbjct: 192 YFAIVAGVIYLVFTTLSNGILWWLNRRYTVGVKR 225



 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  IL G + T  LA S ++ A I+G +    +LS N+L++ I   Y  + R +P LV+
Sbjct: 5   YSDVILKGTLVTLELALSSVLLAVILGLIGAGAKLSRNRLLSLIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|297191655|ref|ZP_06909053.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721589|gb|EDY65497.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 301

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 106/237 (44%), Gaps = 16/237 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         L     T+   A   V +  LG +  +     +R    +  +    
Sbjct: 50  WKPFTEAEAWTTYLLPGLANTLKAAALAMVIALPLGALFGI-----ARLSDHRWVRVPAS 104

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +  F    +  L+L A ++                 S+      ++   L  Y A+ +
Sbjct: 105 IIVEFFRAIPVLLLMLFANEFY----------SRSTNISSDLRPLYAVVTGLVLYNASVL 154

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL- 340
           AE+VR+G++++P+GQ EAA A+GL   +    VLLPQ++ +++P L SQ + ++K+++L 
Sbjct: 155 AEVVRAGILSLPKGQSEAAKAIGLRKGQTMTSVLLPQSVTAMLPALVSQLVVIVKDTALG 214

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              + FA+L++  GT+       I   ++   I++ L++++  F + L  ++   ++
Sbjct: 215 GAVLAFAELLNARGTLAAYYANVIPSFIVVAVIFIVLNLILTTFASWLEGRLRRGKR 271



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 40/91 (43%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             P+T   ++ T +L G  NT   A   M+ A  +G L G  RLS ++ V     + VE 
Sbjct: 50  WKPFTEAEAWTTYLLPGLANTLKAAALAMVIALPLGALFGIARLSDHRWVRVPASIIVEF 109

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           FR IP L+++ F  +       I      L 
Sbjct: 110 FRAIPVLLLMLFANEFYSRSTNISSDLRPLY 140


>gi|126724901|ref|ZP_01740744.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium
           HTCC2150]
 gi|126706065|gb|EBA05155.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium
           HTCC2150]
          Length = 431

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 74/334 (22%), Positives = 138/334 (41%), Gaps = 38/334 (11%)

Query: 70  FEIDQGIVPYTSDSSYATAILV--GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAW 127
           F++ + ++ +T+   +    L+  G + T  L+  G+I   I+ + +     +A    A 
Sbjct: 130 FDLPRKLLIFTALFPFIAYYLIWGGSIWTPILSLVGIIVGYIVYSRLVVSSFAAGFFGAI 189

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +  V V +                      +PD   V      + +R L    L M    
Sbjct: 190 LAAVIVWIV-----------------GGSFVPDGFAVEGSMRSVPSRDLGGFMLNMMLGV 232

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                S  +GI L+L      R       K + +++I       L TL+ +A     +F 
Sbjct: 233 TCVSLSVPIGIALAL-----GRQSSMPLIKFVCVIFIEFIRGVPLITLLFVASVMLAYFF 287

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P                F+ + I ++ ++AA+IAE+VR GL A+P+GQ EA  +LGL +
Sbjct: 288 PPE----------ATVDLFLRVVIMITLFSAAYIAEVVRGGLAALPKGQYEAGDSLGLDY 337

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII----NQTGQA 363
            +A RL++LPQA++  IP + +  + L K++ L   +   DL+ +    I    +  G  
Sbjct: 338 PQAMRLIILPQALKISIPGIVNIAVGLFKDTVLVSVISMFDLIGMIRGPIPASPDWNGVY 397

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E+      ++      I+ +   L  ++A   +
Sbjct: 398 WELFGFASVLFFICCYGISQYSQWLERRLATDHR 431


>gi|91780196|ref|YP_555403.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692856|gb|ABE36053.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 252

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 8/226 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTF 227
                  +T+  +A + V + +LG  L+L  +      R +   +    +  PLL    F
Sbjct: 15  WIWRGFAMTLALSASVAVCATLLGFALALARSAPSAALRRAAAGYVLIFRNSPLLVQLLF 74

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG   L+   L   L  + P +     +  S  + EF++ ++ L+CY+  FI E  R+
Sbjct: 75  WYFGAAVLLPDGLMNWL--NTPHVVVLGPVTLSWPTFEFVAGWLGLTCYSTTFIGEEFRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V  GQ +AA ALGLT     R V+LPQA+R   PPL  QY+N++KNSSL +A+GFA
Sbjct: 133 GMRGVRDGQYQAAAALGLTRFATFRHVILPQAVRIATPPLAGQYMNVIKNSSLTMAIGFA 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +L      +  +T +  +   +   +Y++    I + +     + A
Sbjct: 193 ELSYSSRQVETETLKTFQSFGMATLLYIAAIATIEVALLIWQRRGA 238



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 35/80 (43%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I  GF  T  L+ S  + AT++G  +   R + +  +      YV +FRN P LV
Sbjct: 11  RYVAWIWRGFAMTLALSASVAVCATLLGFALALARSAPSAALRRAAAGYVLIFRNSPLLV 70

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
            + F Y     +LP    + 
Sbjct: 71  QLLFWYFGAAVLLPDGLMNW 90


>gi|300313536|ref|YP_003777628.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300076321|gb|ADJ65720.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 223

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 14/235 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F               + T  ++     VLG+ + +F    +R       K +   
Sbjct: 1   MAYQFDFLSTFDYTDVIVKGVATTIELIAIGGVLGVAVGIFG-AWARTQGPGWLKPVVSG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   +I   P LV +   +           F          E  +  +A+     A+  
Sbjct: 60  YVE--IIRNTPFLVQLFFIF-----------FGLPSLDIHISEITAAIVAMVINLGAYST 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A+PRGQ+EAA +L ++  +  R ++L  A++ I P L+SQ + ++  S++  
Sbjct: 107 EIIRAGVQAIPRGQIEAAQSLSMSRMQIFRHIILRPALQKIWPALSSQVVIVMLGSAVCS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   +L      I  +  +A E  ++   IYL L+I++   +  +        +
Sbjct: 167 QIAVEELSFAANFIQGRNFRAFEAYIVATAIYLVLAILLRQVLRLIGHYFITARR 221



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 38/111 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S   Y   I+ G   T  L   G +    +G      R      +  +   YVE+ R
Sbjct: 6   DFLSTFDYTDVIVKGVATTIELIAIGGVLGVAVGIFGAWARTQGPGWLKPVVSGYVEIIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLDIHISEITAAIVAMVINLGAYSTEIIRAGVQAI 116


>gi|290963274|ref|YP_003494456.1| amino acid permease [Streptomyces scabiei 87.22]
 gi|260652800|emb|CBG75933.1| putative amino acid permease [Streptomyces scabiei 87.22]
          Length = 296

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 14/255 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           + +  Y            +      +   +   +F    +    +      VL     L 
Sbjct: 30  LGWLGYLIYARFDERDQWAAEKWQPLLRADVWTTFILPGLRGTLEAAGLGIVLAGSFGLL 89

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
               +R       +      +  F    +P L+LI   +   F            G TVS
Sbjct: 90  -FATARMSEHTWIRVPAAAVVEFF--RAVPLLLLIFCAFFGSFAL---------TGQTVS 137

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F ++ + L+ Y  + IAE +R+G+ ++P+GQ EAA ALG+   +   LVL+PQA+ ++
Sbjct: 138 P-FTAVVLGLTLYNGSVIAETLRAGVNSLPKGQAEAARALGMPKSQTMALVLMPQAIVAM 196

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +P + SQ++ LLK+S+L   VG+ +LV  G   I       I   L+   I+++++  + 
Sbjct: 197 MPAIVSQFVVLLKDSALGFIVGYDELVDRGLNGIAANFSNVIPAALLVATIFIAINTALD 256

Query: 383 LFMNRLNAKIALKEK 397
              + L  +I+   K
Sbjct: 257 ALAHWLQRRISRGRK 271



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 13/143 (9%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
                +    +LA ++TV   W    +Y   ++ +                 +   P   
Sbjct: 11  PGRRGVLRNRVLAAVITVALGWLGYLIYARFDERDQ-------------WAAEKWQPLLR 57

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              + T IL G   T   A  G++ A   G L    R+S +  +       VE FR +P 
Sbjct: 58  ADVWTTFILPGLRGTLEAAGLGIVLAGSFGLLFATARMSEHTWIRVPAAAVVEFFRAVPL 117

Query: 142 LVVIFFLYKSVLSVLPIPDHSIV 164
           L++IF  +    ++         
Sbjct: 118 LLLIFCAFFGSFALTGQTVSPFT 140


>gi|310766981|gb|ADP11931.1| Glutamate/aspartate transport system permease [Erwinia sp. Ejp617]
          Length = 225

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    M    KI   + V GI+       + R    K       +Y
Sbjct: 1   MYQFDWSTIVPNLPWLWNGMVITLKITFTAIVFGIIWGTLL-AVMRLSSFKPVSWFAKIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPGFLQQVLGLSPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G++++ RGQ  AA+ALG+T  ++ +L++LPQA R++IP L +Q + L +++SL   
Sbjct: 115 IIRAGILSIARGQGNAALALGMTQWQSMQLIVLPQAFRAMIPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI    G  IE++L    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTADTIGVNNGTEIEMVLFAGAVYFVISLSASLLVSYLKKK 222



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 39/66 (59%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T  + F+ ++   I GTL+   RLS+ K V+W  ++YV +FR++P ++V+ +
Sbjct: 15  WLWNGMVITLKITFTAIVFGIIWGTLLAVMRLSSFKPVSWFAKIYVNLFRSVPLVMVLLW 74

Query: 148 LYKSVL 153
            Y  V 
Sbjct: 75  FYLVVP 80


>gi|118586386|ref|ZP_01543835.1| glutamine ABC transporter, integral membrane protein [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433173|gb|EAV39890.1| glutamine ABC transporter, integral membrane protein [Oenococcus
           oeni ATCC BAA-1163]
          Length = 214

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 19/221 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           +  L     T+ ++    + S VLG + ++      +    KT   +   YI  F    L
Sbjct: 10  HSFLVAFGYTLLSSIIALIASTVLGTLFAIL-----QIVPIKTANVIARAYIEVFRNIPL 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +V+                +  +        F +  I L+ YT+AFIAE VR+G+ +V
Sbjct: 65  LIIVMFF--------------YLVVTKIVKIGGFTAGTIGLTLYTSAFIAETVRAGINSV 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ E A A GL+  +  R+++LPQA +  IP L +Q++NL+KNSS+   V   DL+  
Sbjct: 111 GIGQTEGARANGLSFWQTLRIIILPQAFKIAIPSLGNQFINLVKNSSILAFVAGGDLMYT 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +   T  +    +I    YL +++ +  +M  L  K+ 
Sbjct: 171 ANNVAATTFDSFNSYIIVGIFYLIITLPLNYYMKFLETKLK 211



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            LV F  T   +   +I +T++GTL    ++   K    I R Y+EVFRNIP L+++ F 
Sbjct: 12  FLVAFGYTLLSSIIALIASTVLGTLFAILQIVPIKTANVIARAYIEVFRNIPLLIIVMFF 71

Query: 149 YKSVLSV 155
           Y  V  +
Sbjct: 72  YLVVTKI 78


>gi|51243942|ref|YP_063826.1| glutamine transport system permease protein (GlnP) [Desulfotalea
           psychrophila LSv54]
 gi|50874979|emb|CAG34819.1| related to glutamine transport system permease protein (GlnP)
           [Desulfotalea psychrophila LSv54]
          Length = 299

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 67/272 (24%), Positives = 119/272 (43%), Gaps = 24/272 (8%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V    Y      +    + I    G    +  L     T+  +    +F+ ++G  + +
Sbjct: 29  LVWGMNYHWRWQAVLPYIYYINPQTGEGRPSVLLEGLFTTIRLSIWAMIFATLIGFSMGI 88

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH----FDKPVLGQFN--- 255
                 R       + +   YI+  LI   P LVLI + Y       F    L  F    
Sbjct: 89  M-----RTSSRLFFRLVGTTYIT--LIRNTPPLVLIFIFYYFISDQLFALLPLDDFMRNL 141

Query: 256 ----------FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                     F         F S  + L+ +  A+I EIVR+G+ AV RGQ EA+ ALGL
Sbjct: 142 SPRSQRAISLFFSKPETITPFFSGILTLALFQGAYIGEIVRAGIEAVDRGQWEASSALGL 201

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T     R V+LPQA+R+++P L ++++N +K SS+   +   +L   G  ++  +   +E
Sbjct: 202 TKWTQLRSVILPQAVRTMLPTLANEFINTIKWSSIVSIISIQELTFQGMQVMASSQATLE 261

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + LI   +YL + + ++  ++ +  +IA  ++
Sbjct: 262 VWLIITSMYLIICLFLSYIVHCIEKRIADPDR 293



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 1/113 (0%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  L+   MI AT+IG  +G  R S+      +   Y+ + RN PPLV+IF 
Sbjct: 60  VLLEGLFTTIRLSIWAMIFATLIGFSMGIMRTSSRLFFRLVGTTYITLIRNTPPLVLIFI 119

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            Y  +   L            +   ++       +       F FS +L + L
Sbjct: 120 FYYFISDQLFALLPLDDFMRNLSPRSQRAISLFFSKPETITPF-FSGILTLAL 171


>gi|171322527|ref|ZP_02911319.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171092142|gb|EDT37551.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 237

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 86/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R   +K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKKKWLSRAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +     +  S          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQFVRGTPLL-DSFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 TFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S ++     +   +
Sbjct: 203 FGIAALLYLVISFVLVWLFRQAERR 227



 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 35/106 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL    +     +   +   R+S  K ++    +Y  VFR  P  V +   Y
Sbjct: 20  ITGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLSRAVWLYTYVFRGTPLYVQLLLCY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  +    ++  F     +  L   TL             +
Sbjct: 80  TGLYSLQFVRGTPLLDSFFRDGMHCTLLAFTLNTCAYTTEIFAGAI 125


>gi|13473260|ref|NP_104827.1| glutamine ABC transporter (integral membrane protein)
           [Mesorhizobium loti MAFF303099]
 gi|14024008|dbj|BAB50613.1| glutamine ABC transporter (integral membrane protein)
           [Mesorhizobium loti MAFF303099]
          Length = 216

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 30/219 (13%)

Query: 184 DTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
             +  +   S V G++L +         R +      T + +P+L +  F+ +GLP + L
Sbjct: 21  WVSLLVVTLSLVAGVLLGVGLVYGPAPLRWAVRIFSDTIRGIPILVLMFFVYYGLPAIGL 80

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
                                     P F +  +AL+ +  A + E +R  + ++P+GQ 
Sbjct: 81  HL------------------------PSFWAAVLALTLFKTAQVIEYLRGAVASIPKGQS 116

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA+A+GLT R+    V+ PQA R  +PP  +   + +K S+L   +G  DL+     +I
Sbjct: 117 EAAMAIGLTFRQRLTFVIFPQAFRRFLPPWINGVTDAVKGSALVSLLGITDLMQAINQVI 176

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +T +A+ + ++   IY +++  ++L   RL  + A   
Sbjct: 177 GRTYEAMPLYILGALIYFAVNYALSLASRRLERRFAFIR 215



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 36/75 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  GF  T W++   +  + + G L+G G +     + W  R++ +  R IP LV++FF+
Sbjct: 12  LAKGFAVTLWVSLLVVTLSLVAGVLLGVGLVYGPAPLRWAVRIFSDTIRGIPILVLMFFV 71

Query: 149 YKSVLSVLPIPDHSI 163
           Y  + ++        
Sbjct: 72  YYGLPAIGLHLPSFW 86


>gi|312958335|ref|ZP_07772856.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311287399|gb|EFQ65959.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 219

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 17/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                FS V G++  +  T  S+  +        +L +   L   +P LV +   Y L F
Sbjct: 28  FLSIAFSTVCGVLYGVLRTLNSKLIN-------AVLRVYLELFRAIPVLVWL---YLLFF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + LS + A+ + E+VR  L ++PRGQ EA +++GL+
Sbjct: 78  GMPIFFGLSI-------PSFWCAVLVLSLWGASEVGEVVRGALHSLPRGQREAGLSIGLS 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP  + Y  ++K SSLAV +G  D++ VG  II +T +++ I
Sbjct: 131 DPQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  +  +   ++     L  + A
Sbjct: 191 YGALFLFFFFICYPLSAASKVLERRWA 217



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  +T+ G L G  R   +KL+  + RVY+E+FR IP LV ++ L
Sbjct: 16  LGKGAAQTLSISFLSIAFSTVCGVLYGVLRTLNSKLINAVLRVYLELFRAIPVLVWLYLL 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGMP 80


>gi|326403333|ref|YP_004283414.1| putative amino acid ABC transporter permease [Acidiphilium
           multivorum AIU301]
 gi|325050194|dbj|BAJ80532.1| putative amino acid ABC transporter permease protein [Acidiphilium
           multivorum AIU301]
          Length = 274

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 102/185 (55%), Gaps = 15/185 (8%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + L  +YI  F   GLP+LV+        F    L    F G +     + +
Sbjct: 94  RLSPVAPYRWLATVYIEFF--RGLPSLVV--------FIAFSLLPLAFSGLTIPWSPYGT 143

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           +++AL    +A++AE +R+G+ AVP+GQ+EAA +LG++  +A R ++L QA+R ++PPLT
Sbjct: 144 VWVALGVVGSAYMAETMRAGIQAVPKGQVEAARSLGMSSAQAMRKIVLMQALRLMVPPLT 203

Query: 329 SQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           ++ + L+K+SSL   VG +    DL   G +  N T   I  +++    YL +++ +++ 
Sbjct: 204 NELIMLIKDSSLVFVVGLSAGQFDLTEFGRSTAN-TNVNITPLVVAGLGYLLITLPLSML 262

Query: 385 MNRLN 389
           + R+ 
Sbjct: 263 VRRME 267



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +    +NT        +   ++G ++   RLS      W+  VY+E FR +P LV
Sbjct: 60  TILHGLANALLNTALYTAGAFVLGLVLGLVLALMRLSPVAPYRWLATVYIEFFRGLPSLV 119

Query: 144 VIFFLYKSVLSVLPIPDHSIVL 165
           V        L+   +       
Sbjct: 120 VFIAFSLLPLAFSGLTIPWSPY 141


>gi|283834046|ref|ZP_06353787.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
 gi|291070189|gb|EFE08298.1| glutamate/aspartate ABC transporter, permease protein [Citrobacter
           youngae ATCC 29220]
          Length = 246

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSGI 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   +      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVIPELLPENIGMWFKSELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMNLV 233

Query: 389 NAKIAL 394
             KI L
Sbjct: 234 ERKIRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A +IG+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ I  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGIGTLYVELFRNVPLIVQFFTWYLVIPELLPENIGMW 99


>gi|241204486|ref|YP_002975582.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858376|gb|ACS56043.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 384

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 127/307 (41%), Gaps = 22/307 (7%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    I A     + G   L      A +  +++ +   +P L+      +  L+ + + 
Sbjct: 92  ACWAFISAKYDQFIFGRYPLGERWRPAIVGILFILLL--VPMLIP--SAPRKGLNAILLF 147

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
               V+ F +     GL      +     + +    +GI +SL       L R       
Sbjct: 148 AVLPVIAFWLLHGGLGLEVVETPLWGGLMVTLVLSFVGIAVSLPVGILLALGRRSKMPVI 207

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + L + +I       L T++ +A           +    F+       + +   I +S +
Sbjct: 208 RMLCVTFIEVIRGVPLITVLFMA----------SVMLPLFLPTGWNVDKLLRALIGVSIF 257

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A++AE++R GL A+P+GQ E A +LGL + + TRL+++PQA++ +IP + + ++   K
Sbjct: 258 TSAYMAEVIRGGLQAIPKGQFEGADSLGLGYWQKTRLIIMPQAIKLVIPSIVNTFIGTFK 317

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +          I  ++   FI+      ++ +   +   
Sbjct: 318 DTSLVTIIGMFDLLGIVKLNFSDANWASAVTPITGLIFAGFIFWLFCFGMSRYSGFMERH 377

Query: 392 IALKEKK 398
           +    K+
Sbjct: 378 LDTGHKR 384



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 37/77 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G L+  GR S   ++  +C  ++EV R +P + V+F  
Sbjct: 171 LWGGLMVTLVLSFVGIAVSLPVGILLALGRRSKMPVIRMLCVTFIEVIRGVPLITVLFMA 230

Query: 149 YKSVLSVLPIPDHSIVL 165
              +   LP   +   L
Sbjct: 231 SVMLPLFLPTGWNVDKL 247


>gi|134296592|ref|YP_001120327.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134139749|gb|ABO55492.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 237

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R    K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKRKWLSGAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++     +  +          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQIVRGTPLL-DAFFRDGMRCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 TFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     +   +
Sbjct: 203 FGIAALLYLVISFTLVWLFRQAERR 227



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 33/104 (31%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T WL    +     +   +   R+S  K ++    +Y  VFR  P  V +   Y  
Sbjct: 22  GVAITLWLLVVSIGLGFCLSVPLAVARVSKRKWLSGAVWLYTYVFRGTPLYVQLLLCYTG 81

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           + S+  +    ++  F        L   TL             +
Sbjct: 82  LYSLQIVRGTPLLDAFFRDGMRCTLLAFTLNTCAYTTEIFAGAI 125


>gi|315299179|gb|EFU58433.1| putative ATP synthase F0, A subunit [Escherichia coli MS 16-3]
          Length = 256

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 18/260 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVL 200
           L+  FF  + +             PFG       +          +   ++ +F++G   
Sbjct: 1   LLPSFFWSRFMSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFF 60

Query: 201 SLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            +  T  +R        + +  + +PL+         +P L+   +      +     QF
Sbjct: 61  GILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQF 120

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                      F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R V
Sbjct: 121 -----------FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYV 169

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           LLP A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y
Sbjct: 170 LLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAY 229

Query: 375 LSLSIMIALFMNRLNAKIAL 394
           + ++  I L M  +  K+ L
Sbjct: 230 VLINAFIMLVMTLVERKVRL 249



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P +V
Sbjct: 30  TYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIV 89

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
             F  Y  +  +LP      
Sbjct: 90  QFFTWYLVIPELLPEKIGMW 109


>gi|172063855|ref|YP_001811506.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171996372|gb|ACB67290.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 225

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 7/206 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V +  +G++L +     +       G      Y  T  + G+P  +++ + Y  
Sbjct: 17  VTLELAVAALCVGMLLGIAG---ASAKLSSLGWLRHATYALTNFLRGIPEFLILLICY-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F    L    F G   +SP F +  IAL+    A+ +E+ R   IAVP GQ+EAA A G
Sbjct: 72  -FGLSHLLNAQFDGAIVISP-FSAGVIALAVVFGAYSSEMFRGAFIAVPAGQIEAARAYG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +    V LPQA R  +P L + + NLLK++SL   VG  D++         T Q  
Sbjct: 130 MTRLQTLWYVRLPQAWRICLPSLNNMWQNLLKDTSLVSIVGLEDMLRKANIAAQFTKQPF 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
              +    +Y             L  
Sbjct: 190 VFYVTVGIVYFGFLAASNPVFAWLER 215


>gi|170746805|ref|YP_001753065.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170653327|gb|ACB22382.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 217

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +     I + S V+  +L L    + R            + I+  ++ G+
Sbjct: 9   QDYLPILLQGVQLTILITIASLVVSTLLGLV-WAVMRVSGIAILSGFSAVMIN--ILRGI 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   Y           F             +  I L    +A+ AE  R+G+ AV
Sbjct: 66  PIIVQLFYIY-----------FVMPDFGLSLTAVQAAIIGLGIAYSAYQAENFRAGIEAV 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ+EAA+++G+      R V+LPQA+R  +PP  +  + +LK+SS A  +  A+L   
Sbjct: 115 DRGQVEAALSIGMGWGMTMRRVILPQAIRIALPPYGNIMIMMLKDSSQASTITVAELALQ 174

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  I + T +   +  +   +YL+LS+ + L +    AK
Sbjct: 175 GKLIASSTFKNTSVYTLVALMYLALSLPLILLVRHFEAK 213



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 46/131 (35%), Gaps = 3/131 (2%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
               Y   +L G   T  +  + ++ +T++G +    R+S   +++    V + + R IP
Sbjct: 7   DAQDYLPILLQGVQLTILITIASLVVSTLLGLVWAVMRVSGIAILSGFSAVMINILRGIP 66

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA---KIFVFSFVLG 197
            +V +F++Y  +               G+ +               A        +  +G
Sbjct: 67  IIVQLFYIYFVMPDFGLSLTAVQAAIIGLGIAYSAYQAENFRAGIEAVDRGQVEAALSIG 126

Query: 198 IVLSLFATRLS 208
           +   +   R+ 
Sbjct: 127 MGWGMTMRRVI 137


>gi|186472111|ref|YP_001859453.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184194443|gb|ACC72407.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 218

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 13/190 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + + +LY+  F   G P L+ + L +   F  P++              +++
Sbjct: 42  RVSPFPWLRRIVVLYVELF--QGTPLLMQLFLAF---FGLPLM--------GVDVSPWVA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L+ YT+A++ +I R  + AVPRGQ  A  +LG+T  +  R V+ PQA++  + P  
Sbjct: 89  ATVTLTLYTSAYLVDIWRGCVEAVPRGQWAAGASLGMTFAQQLRYVVWPQALKIAVAPTV 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              + ++K+++L   +GF +L   G  I N   +   I  +   +Y ++   +  +   L
Sbjct: 149 GFLVQVVKSTALTSIIGFTELTKTGTMITNAAFRPFPIYGMVAVLYFAMCFPLTWWARLL 208

Query: 389 NAKIALKEKK 398
             K    +++
Sbjct: 209 ERKQKATQQR 218



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 38/105 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
              A  +L+    T  L+    +   ++G L+ A R+S    +  I  +YVE+F+  P L
Sbjct: 7   WDIARNLLLAARWTVLLSLIAFVGGGVVGLLLLAMRVSPFPWLRRIVVLYVELFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + +F  +  +  +       +     + L               A
Sbjct: 67  MQLFLAFFGLPLMGVDVSPWVAATVTLTLYTSAYLVDIWRGCVEA 111


>gi|300937879|ref|ZP_07152671.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
 gi|300457104|gb|EFK20597.1| ABC transporter, permease protein [Escherichia coli MS 21-1]
          Length = 255

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 18/258 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSL 202
             FF  + +             PFG       +          +   ++ +F++G    +
Sbjct: 2   PSFFWSRFMSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 61

Query: 203 FATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
             T  +R        + +  + +PL+         +P L+   +      +     QF  
Sbjct: 62  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQF-- 119

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                    F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLL
Sbjct: 120 ---------FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLL 170

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ 
Sbjct: 171 PNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVL 230

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++ +I L M  +  K+ L
Sbjct: 231 INAVIMLVMTLVERKVRL 248



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 12  IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 61

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 62  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 108


>gi|262275664|ref|ZP_06053473.1| ABC-type amino acid transport system permease component [Grimontia
           hollisae CIP 101886]
 gi|262219472|gb|EEY70788.1| ABC-type amino acid transport system permease component [Grimontia
           hollisae CIP 101886]
          Length = 221

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 19/230 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    + R +    +T+   A   V +  L     L      +    +  +   + YI  
Sbjct: 6   FISMYSGRFIDGTLVTLMQTALATVLTVFLAFSFGLM-----KLSPNRLVRGFAICYIEL 60

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G   LV +   +       VL  F           F + ++ +     ++ AE+VR
Sbjct: 61  F--RGTSLLVQLFWVFY------VLPLFGL-----TLDAFTAGFVTVGLNLGSYGAELVR 107

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ AVPRGQ EAA AL + + K    ++LPQA+ +++P   +  + LLK ++L   +  
Sbjct: 108 GGIQAVPRGQWEAAKALNMPNHKRMIRIILPQALLTMLPAWGNLLIELLKGTALVALISV 167

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLS-IMIALFMNRLNAKIALK 395
           +DL+     I   T  + +     + IY  L+  +I   M  L + +  K
Sbjct: 168 SDLMFEAKQINGTTFLSAQAFGTALIIYYILARFIITPGMRLLESYMTKK 217



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y+   + G + T        +    +    G  +LS N+LV      Y+E+FR    L
Sbjct: 8   SMYSGRFIDGTLVTLMQTALATVLTVFLAFSFGLMKLSPNRLVRGFAICYIELFRGTSLL 67

Query: 143 VVIFFLYKSVLSV 155
           V +F+++  +   
Sbjct: 68  VQLFWVFYVLPLF 80


>gi|220913228|ref|YP_002488537.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219860106|gb|ACL40448.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 254

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 98/195 (50%), Gaps = 14/195 (7%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            +         + +  +Y   F       LV++ +   L    P+  +    G     P 
Sbjct: 51  AMMGISRNAGARWVARIYTDIFRGLPA-ILVILVIGIGLS---PIAREIT--GSRNPYPL 104

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                +AL+   AA+I EI RSG+ +V +GQ+EA+ ALG ++  + RLV++PQ +R ++P
Sbjct: 105 ---GILALTLIAAAYIGEIFRSGIQSVEKGQLEASRALGFSYGSSMRLVVVPQGIRRVLP 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            L +Q+++LLK+SSL   +G A    ++  +G   +  TG  +  ++    +YL L++ +
Sbjct: 162 ALVNQFISLLKDSSLVFMLGLAASDREIFRIGNDAMANTGN-LSPLVAAGVLYLILTVPL 220

Query: 382 ALFMNRLNAKIALKE 396
             F+N ++ ++    
Sbjct: 221 THFVNFIDNRLRTGR 235



 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + VG  NT  LA +  I  +++G L+    +S N    W+ R+Y ++FR +P ++VI  +
Sbjct: 25  LSVGLPNTLILAVASGILGSLLGLLLAMMGISRNAGARWVARIYTDIFRGLPAILVILVI 84

Query: 149 YKSV 152
              +
Sbjct: 85  GIGL 88


>gi|322832148|ref|YP_004212175.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167349|gb|ADW73048.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 222

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 3/174 (1%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L  G P LV I L Y      P + +  ++      P ++    AL+  +AA+  ++
Sbjct: 51  YITLFTGTPLLVQIFLIYYGPGQFPSIREIPWLWEVLSQP-WLCAMFALALNSAAYTTQL 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
               + A+P GQ ++  ALG++  +    +LLP A +  +   +++ + + K++SLA  +
Sbjct: 110 FTGAVRAIPSGQWQSCEALGMSKPQTL-RILLPYAFKRALSSYSNEVVLVFKSTSLAYTI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              D++     +  +T   + +      +YL ++ ++ L M  +  +    E++
Sbjct: 169 TLMDVMGHSQLMYGRTYDVM-VFGAAGVVYLCVNGLLTLMMRLIERRALAFERR 221


>gi|227530173|ref|ZP_03960222.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227349926|gb|EEJ40217.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 217

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + SF++G +L +      ++     G          F+I  +  L
Sbjct: 17  LQGLGITIEISVASIICSFIIGTLLGIIRYAKIKYVSAIVG----------FIIDLIRNL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ + +  +F  P +G    I          +  +AL+ + ++ +AEIVRSG+ ++   
Sbjct: 67  PLLLIIFFTYFGLPNIGVKPEI--------IPAAIMALTVFESSMVAEIVRSGINSIDYA 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A+A GLT  +A RL++LPQA+++++P L SQ+++L+K++SLA  +   +L+     
Sbjct: 119 QTEGALANGLTKWQALRLIVLPQAIKNMLPALVSQFISLVKDTSLATIIVLPELMYHAQI 178

Query: 356 IINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I  Q T   I + +    +Y  +   ++L    L+  +A
Sbjct: 179 IYGQNTNYIIPMFVALAVLYFIVCYSLSLLARYLDKHLA 217



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 42/79 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++ + +I + IIGTL+G  R +  K V+ I    +++ RN+P 
Sbjct: 9   SWVNIRFLLQGLGITIEISVASIICSFIIGTLLGIIRYAKIKYVSAIVGFIIDLIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIPD 160
           L++IFF Y  + ++   P+
Sbjct: 69  LLIIFFTYFGLPNIGVKPE 87


>gi|315102984|gb|EFT74960.1| conserved hypothetical protein [Propionibacterium acnes HL050PA2]
          Length = 198

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +GL  ++   L  ++ F  P   QF  I    V     +  I L     A++ EI RS
Sbjct: 1   MFWGLLAVLYPTLPIEVPFGGP---QFASIETEKVVTTLATTIIGLDLNENAYLTEITRS 57

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL +V  GQ EAA  LG+      R V++PQ MR II PL ++ + +LK +SL +AV F 
Sbjct: 58  GLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGNETIGMLKTTSLVLAVPFT 117

Query: 348 -DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            DL      I N+    I ++++  F YL ++ ++ +  + L
Sbjct: 118 LDLQYATSAIANRIYAPIPLLVVTAFWYLVMTSVLMIGQHFL 159


>gi|270263685|ref|ZP_06191954.1| transporter [Serratia odorifera 4Rx13]
 gi|270042569|gb|EFA15664.1| transporter [Serratia odorifera 4Rx13]
          Length = 295

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 11/269 (4%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            R +  L  +F L   V SV         +    F     LS    T+       +FS +
Sbjct: 16  LRLVGALFSVFILAAIVQSVAVNERWEWGVFAEWFFAPAVLSGLGQTLLLTLLGTLFSII 75

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-- 253
            G +L+L     +R        +L   YI  F    L  +++I   +   +D   LG   
Sbjct: 76  FGTLLAL-----ARLSRSYLLASLAWGYIWLFRSLPLILVLIILYNFSYLYDSISLGIPF 130

Query: 254 ----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F       +  +F    + L+   +A+ AEI+R G++ V  GQ EAA ALGL   +
Sbjct: 131 TSLVFASYPTIDILSQFSVAVLGLTLVQSAYTAEIIRGGILGVEYGQHEAAAALGLPGYR 190

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
            T  ++LPQA+RSI+P   ++ ++L K +S+   +   +L      I N+T Q I ++++
Sbjct: 191 RTFRIILPQALRSIVPTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNRTQQVIPLLMV 250

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               YL ++  +++    +    A    +
Sbjct: 251 ATVWYLFITTALSVIQYYIERYFARGAVR 279


>gi|330971238|gb|EGH71304.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 220

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    +   G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWNAREVLWSGFMTSIQCSALAIAAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL            +               F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVLAVFYMVPALGWQI-------------SAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILPAWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 219


>gi|186473670|ref|YP_001861012.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196002|gb|ACC73966.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 219

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 104/226 (46%), Gaps = 14/226 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L      + T+ ++ V   ++GI L L    L      K  + L ++ +      
Sbjct: 7   WWAQWLPNLLYGLLTSVEVTVACMLIGIPLGLL-FALGVGSTNKLVRRLTVILVELGRGA 65

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L+        +F  P +              F+S  +AL+  TAA+ +EI+R+GL+
Sbjct: 66  PALILLQFF-----YFGLPAVH--------ITLSSFVSSTLALAWCTAAYTSEIIRAGLL 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP GQ EAA A+GL      +L++LPQ +R  +PPL    L +L+ +SL   V   +LV
Sbjct: 113 SVPHGQREAAYAIGLKEVDTLKLIILPQGLRVSVPPLLGFALVMLQATSLCFTVALPELV 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    I   T   ++++ +   +Y ++ +   L ++ +  ++A  E
Sbjct: 173 TRANQIGTGTFLYMQVLTLTALLYAAICLPSTLLVSSIERRLARHE 218



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +L G + +  +  + M+    +G L   G  S NKLV  +  + VE+ R  P L+
Sbjct: 10  QWLPNLLYGLLTSVEVTVACMLIGIPLGLLFALGVGSTNKLVRRLTVILVELGRGAPALI 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++ F Y  + +V       +     +   
Sbjct: 70  LLQFFYFGLPAVHITLSSFVSSTLALAWC 98


>gi|294676182|ref|YP_003576797.1| amino acid ABC transporter permease [Rhodobacter capsulatus SB
           1003]
 gi|294475002|gb|ADE84390.1| amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 236

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 2/194 (1%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ--FNFIGGSTVSP 264
           ++     +      + +  T ++ G+P ++ + + Y             F    G+   P
Sbjct: 42  VAALSLSRRPGLRAMGWGYTTVMRGMPEILTLFIVYNGLGLGLNRLLDAFAPQFGAVDFP 101

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  IAL+   AAF AE++R    +VP GQ+ A +A+G+T R+    + LPQ  R  +
Sbjct: 102 PFAAGVIALALVFAAFAAEVLRGAFQSVPEGQVLAGLAIGMTGRQVFWRIKLPQLWRFAL 161

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P + + +LNLLK+++L   +   DL+      +  T Q     L    IY +L +   L 
Sbjct: 162 PGMGNLWLNLLKDTALVSVIALDDLMRATKVAVGVTKQPFTFYLAACLIYWALCLGSELV 221

Query: 385 MNRLNAKIALKEKK 398
           + RL A+     ++
Sbjct: 222 LARLEARANRGLRR 235



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 1/97 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + + +  Y     +   +L G   T  LA + +    ++G  V A  LS    +  +   
Sbjct: 1   MMETLFSYGPQG-WGDELLAGLGVTLQLAAATLPLGLLLGFFVAALSLSRRPGLRAMGWG 59

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           Y  V R +P ++ +F +Y  +   L     +    FG
Sbjct: 60  YTTVMRGMPEILTLFIVYNGLGLGLNRLLDAFAPQFG 96


>gi|304393287|ref|ZP_07375215.1| octopine transport system permease protein OccQ [Ahrensia sp.
           R2A130]
 gi|303294294|gb|EFL88666.1| octopine transport system permease protein OccQ [Ahrensia sp.
           R2A130]
          Length = 240

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 3/211 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I V  ++LG+++ + +  L + +     K    L I T LI  +P LVLI L Y    
Sbjct: 26  LQIAVGGYILGLLIGV-SGALGKIYGGPVLKW--SLEIYTTLIRAVPELVLILLLYFAGT 82

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G        +    L     A+  E++R  ++A+P+G++EA  + G+ 
Sbjct: 83  QLLSQAFMAMGYGRVDISGLAAGIAVLGFVQGAYSTEVMRGAILAIPKGEVEAGASFGMG 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    +++P  +   +P L + +L + K+++L   VG+ +L  V       T   +E 
Sbjct: 143 SFKIFHRIMIPAMLPLALPGLANLWLIITKDTALLAVVGYEELALVTRQAAGATRYYLEA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++   IYL+++++          ++    K
Sbjct: 203 YIVAGAIYLAVTLVSNQLFKLAENRVTRGRK 233



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y   S +   ++ G   +  +A  G I   +IG     G++    ++ W   +Y  + R 
Sbjct: 8   YELISEWGPNLMGGLAASLQIAVGGYILGLLIGVSGALGKIYGGPVLKWSLEIYTTLIRA 67

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSI 163
           +P LV+I  LY +   +L     ++
Sbjct: 68  VPELVLILLLYFAGTQLLSQAFMAM 92


>gi|83717832|ref|YP_439605.1| histidine ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|167616164|ref|ZP_02384799.1| histidine transport system permease protein [Burkholderia
           thailandensis Bt4]
 gi|83651657|gb|ABC35721.1| histidine ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 237

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 89/225 (39%), Gaps = 4/225 (1%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYIST 226
           G +  N   S           +++    +G+   L     ++R    +       LY  T
Sbjct: 6   GQYWQNYLFSDGYRISGLAITLWLLVVSIGLGFGLAVPLAVARASRNRAVSGAVWLY--T 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++  G P  V + L Y   +   V+    ++  S          +A +    A+  EI  
Sbjct: 64  YVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLD-SFFRSAMNCTLLAFTLNECAYATEIFA 122

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA     
Sbjct: 123 GAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTATV 182

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 183 PDILKVTRDVNSATYASFQAYGIAAALYALIVFALIWVFRRMEAR 227



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    + G   T WL    +     +   +   R S N+ V+    +
Sbjct: 5   IGQYWQNYLFSDGYR---ISGLAITLWLLVVSIGLGFGLAVPLAVARASRNRAVSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|90424050|ref|YP_532420.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           BisB18]
 gi|90106064|gb|ABD88101.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris
           BisB18]
          Length = 499

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 18/257 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FAT 205
           ++++L  L +     V+ F M L+  GL      M     + +   V GIV S+    A 
Sbjct: 252 WRALLRSLAMFAGIAVVIFVMRLDRGGLPIVDTRMWGGLLVTLVVSVTGIVTSMPVGIAL 311

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R       +   +L+I  +    L T VL    Y L           F+ G+     
Sbjct: 312 ALGRRSTIPLIRIFSVLFIEFWRGVPLIT-VLFFATYMLPL---------FLPGNFTVDG 361

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I ++ +  A+ AE++R GL A+PRGQ EAA ALGL++ K T LV++PQA+R +IP
Sbjct: 362 LVRVLIGIALFAGAYNAEVIRGGLQAIPRGQAEAASALGLSYWKITGLVVMPQALRHVIP 421

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSV-----GGTIINQTGQAIEIILIWMFIYLSLSIM 380
            L + ++ L K++SL   V   DL+            +              +Y      
Sbjct: 422 GLVNSFIALFKDTSLVSIVALFDLLGSLRASFADPTWSTPTTLFTGFAFTGIVYFVFCFG 481

Query: 381 IALFMNRLNAKIALKEK 397
           ++ +   +  ++    +
Sbjct: 482 MSRYSLFVEHRLNAHRR 498



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  ++ +G++ +  +G  +  GR S   L+     +++E +R +P + V+FF 
Sbjct: 286 MWGGLLVTLVVSVTGIVTSMPVGIALALGRRSTIPLIRIFSVLFIEFWRGVPLITVLFFA 345

Query: 149 YKSVLSVLP 157
              +   LP
Sbjct: 346 TYMLPLFLP 354


>gi|227431441|ref|ZP_03913490.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352807|gb|EEJ42984.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 219

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 19/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+  +    + SF+ G ++ +       +F +  G           +   +
Sbjct: 16  QYLLGGLGITVGVSIISVILSFIAGSIIGIVQFERIPYFSKFVG----------TINNII 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + + ++F  P L            P F +  +A+S + ++ +AEIVR GL ++
Sbjct: 66  RNLPLLLIIFFVYFVLPKL--------GIHLPIFWATVVAMSTFESSMLAEIVRGGLESI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ E A A GLT+ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  A++   
Sbjct: 118 DEGQFEGARANGLTNIQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEMTYR 177

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  I  Q     I +++    +Y  L+  ++L     + ++A
Sbjct: 178 GQIIYAQNSTYIIPVLIAITLVYFLLNYGLSLIAKWFDRRLA 219



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  ++   +I + I G+++G  +       +        + RN+P L++IF
Sbjct: 16  QYLLGGLGITVGVSIISVILSFIAGSIIGIVQFERIPYFSKFVGTINNIIRNLPLLLIIF 75

Query: 147 FLYKSVLSVLPIPDHSI 163
           F+Y  +  +        
Sbjct: 76  FVYFVLPKLGIHLPIFW 92


>gi|89056451|ref|YP_511902.1| amino acid ABC transporter permease [Jannaschia sp. CCS1]
 gi|88866000|gb|ABD56877.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Jannaschia sp. CCS1]
          Length = 251

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 111/251 (44%), Gaps = 4/251 (1%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V+I+    + +          +     +       +                 + + LS 
Sbjct: 3   VLIYAGVMAAIIYGSYTGAQNMGYNWQWSRVPQFLWTFTDDGFQLGEIFQGLGVTLQLSA 62

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
            A  L+            LL +S  +I     +  +     +     +   +  +G    
Sbjct: 63  TAFALATVLGLLVA----LLRLSDLVIGSAVAVAFLEFNRNIPLLVLLYLFYYVLGPIFG 118

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              + +  + L+ + +  I+EI R+G+ AV  GQ EAA ++G++  +  R ++LPQ++R 
Sbjct: 119 FDRYWASVLTLAVFHSVLISEIFRAGINAVATGQWEAAKSIGMSQGQTYRYIILPQSVRF 178

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++PP+  + ++L+K+S++   +  A+L ++G  II+ T  + EI      +Y++++++++
Sbjct: 179 MLPPMFGEVVHLIKSSAIVSVIAVAELTTIGRNIISDTFLSFEIWFTVALVYMAITLILS 238

Query: 383 LFMNRLNAKIA 393
           + ++ L  + A
Sbjct: 239 VGVSFLERRYA 249


>gi|116619006|ref|YP_819377.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116097853|gb|ABJ63004.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 219

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 19/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+  +    + SF+ G ++ +       +F +  G           +   +
Sbjct: 16  QYLLGGLGITVGVSIISVILSFIAGSIIGIVQFERIPYFSKFVG----------TINNII 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + + ++F  P L            P F +  +A+S + ++ +AEIVR GL ++
Sbjct: 66  RNLPLLLIIFFVYFALPKL--------GIHLPIFWATVVAMSTFESSMLAEIVRGGLESI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ E A A GLT+ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  A++   
Sbjct: 118 DEGQFEGARANGLTNIQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEMTYR 177

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  I  Q     I +++    +Y  L+  ++L     + ++A
Sbjct: 178 GQIIYAQNSTYIIPVLIAITLVYFLLNYGLSLIAKWFDRRLA 219



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  ++   +I + I G+++G  +       +        + RN+P L++IF
Sbjct: 16  QYLLGGLGITVGVSIISVILSFIAGSIIGIVQFERIPYFSKFVGTINNIIRNLPLLLIIF 75

Query: 147 FLYKSVLSVLPIPDHSI 163
           F+Y ++  +        
Sbjct: 76  FVYFALPKLGIHLPIFW 92


>gi|283783253|ref|YP_003374007.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|298252812|ref|ZP_06976606.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
 gi|283441284|gb|ADB13750.1| ABC transporter, permease protein [Gardnerella vaginalis 409-05]
 gi|297533176|gb|EFH72060.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis 5-1]
          Length = 361

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 100/233 (42%), Gaps = 14/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             L      +   + F    +    K  + + V  IV  LF   L R       +++  +
Sbjct: 56  WTLWNPALESEAWVDFYLPGLWMTLKASLLAVVGSIVFGLFFG-LCRLLPNFIIRSISAI 114

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +       +  L++   +              F         + ++ +AL  Y  + +A
Sbjct: 115 VVEFCRAVPVLMLMIFLWR-------------AFALSGMKESSYWAVVLALIMYNGSVVA 161

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VRSG+  +P GQ EA++ALGL+  ++   + +PQA+ +++P   +Q + +LK+++L  
Sbjct: 162 ELVRSGVGNLPNGQREASLALGLSEYQSLTQIEMPQAIIAMMPAAVTQLVVVLKDTALGS 221

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + + DL+     + +     ++ + +   IY  + + ++ F   L + +  +
Sbjct: 222 IIMYTDLLQESRRLGSMYFNILQTLSVAAVIYFLICLALSWFAQWLPSHLKNR 274



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 38/96 (39%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P     ++    L G   T   +   ++ + + G   G  RL  N ++  I  + VE  R
Sbjct: 61  PALESEAWVDFYLPGLWMTLKASLLAVVGSIVFGLFFGLCRLLPNFIIRSISAIVVEFCR 120

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            +P L+++ FL+++             +   + + N
Sbjct: 121 AVPVLMLMIFLWRAFALSGMKESSYWAVVLALIMYN 156


>gi|89092422|ref|ZP_01165376.1| general amino acid ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
 gi|89083510|gb|EAR62728.1| general amino acid ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
          Length = 366

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/282 (20%), Positives = 120/282 (42%), Gaps = 16/282 (5%)

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
               +     + + V  +   L   +    S+ + L +P   I++  G ++    +S   
Sbjct: 95  ELWRINLCVLMLIGVIASSQLLNKDWRNKFSIPAFLLLPFVCILILDGSWIGLEYVSTDY 154

Query: 181 LTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                 N  +   S ++   LS F   L R       K++ +L I  F    +     +A
Sbjct: 155 WGGFALNVLLAAASIIVAFPLS-FVWALGRRSEMPFIKSVSILLIEFFRGVPV-----LA 208

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +      P+     F    T   + + ++I L+ + A ++AE+ R G  AVP GQ EA
Sbjct: 209 LFFMGSVMLPL-----FFPEGTNVDKLVRVWIVLTLFMAGYMAEVFRGGFQAVPTGQYEA 263

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGL++ + T L++LPQ ++  +P + + ++ L KN++  + +G  +++S   T +  
Sbjct: 264 ADSLGLSYWQKTLLIILPQVIKVSMPNILATFVMLFKNTTFLLIIGIFEVLSTTQTALTN 323

Query: 360 T----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    G + E  L    ++      ++     +  K+    K
Sbjct: 324 SNWLGGHSTEGYLFVAIVFWICCYSMSRISASIERKLDTSHK 365


>gi|315927549|gb|EFV06882.1| binding-protein-dependent transport system inner membrane component
           family protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 143

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 1/139 (0%)

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                  T      +  +AL   ++A+IAEIVRSG+ +V +GQMEAA A+GL ++ + + 
Sbjct: 2   IFAFVIFTFIDNLYAAILALGLNSSAYIAEIVRSGINSVDKGQMEAARAMGLDYKTSMKE 61

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQA ++I+P L +++++L K +S+   +   D+     ++        + I+    +
Sbjct: 62  IILPQATKNILPALANEFISLFKETSVVGFISVIDITMQSQSLQAVLYNP-KPIIFTGLV 120

Query: 374 YLSLSIMIALFMNRLNAKI 392
           Y     + + F  +L  ++
Sbjct: 121 YYVSVKIFSYFAKKLELRM 139


>gi|300858068|ref|YP_003783051.1| glutamate ABC transporter permease [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685522|gb|ADK28444.1| glutamate ABC transport system permease protein [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302330349|gb|ADL20543.1| glutamate transporter permease protein GluD [Corynebacterium
           pseudotuberculosis 1002]
          Length = 312

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++V   L   VL  L        + +  F++ R  +   L          FS V+  ++ 
Sbjct: 28  VIVAIALIGWVLVALHSKGQLDAVKWAPFIDPRTWNTYLLPGLVGTLKSAFSSVILAIIL 87

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                L R    ++ + +       F    +P L+LI   YQ      V+          
Sbjct: 88  GVLLGLGRLSRRRSLRWICAAITEFF--RAVPVLLLIIFSYQALAMYKVVPPREL----- 140

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F ++  +L+ Y  A IAEI+R+G+ A+PRGQ EAA ALGL H +  + +LLPQA+ 
Sbjct: 141 ---AFTAVVFSLTMYNGAVIAEILRAGIRALPRGQTEAAQALGLGHWQTMQKILLPQAVA 197

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++P L +Q +  LK+S+L   +G+ ++V  G          +  +++   + + ++  +
Sbjct: 198 AMLPALIAQAVIALKDSALGYQIGYVEIVRQGIQSSATNRNYLPSLIVVAILMILINYSL 257

Query: 382 ALFMNRLNAKIALKEKK 398
            +   R+  ++     +
Sbjct: 258 TVLAERVERQLRAGGAR 274



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDMR-----VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD         N    ++  ++   +  W +  +++  +   +            
Sbjct: 4   RATVLYDAPGPNALRRNALYTVLTVIVAIALIGWVLVALHSKGQLDAVK----------- 52

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
                   P+    ++ T +L G V T   AFS +I A I+G L+G GRLS  + + WIC
Sbjct: 53  ------WAPFIDPRTWNTYLLPGLVGTLKSAFSSVILAIILGVLLGLGRLSRRRSLRWIC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
               E FR +P L++I F Y+++     +P   +     +F
Sbjct: 107 AAITEFFRAVPVLLLIIFSYQALAMYKVVPPRELAFTAVVF 147


>gi|298290389|ref|YP_003692328.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926900|gb|ADH87709.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 541

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 6/164 (3%)

Query: 232 LPTLVLIALKYQLHF-DKPVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIV 285
              L +IA  Y + F   P++ Q  F   +            +  +AL+   A FIAEI+
Sbjct: 46  FRALAIIARGYSIIFRGTPLILQMVFCYNALPLIGIKLTAISAAGLALALNEAPFIAEIL 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RS +I V RGQ+ A  ALG+T     R V+ PQA+RS++P L ++ ++ LKNSSLA  V 
Sbjct: 106 RSNVIGVDRGQVSAGQALGMTPAAIMRRVIAPQAIRSMVPALGNEAVSALKNSSLASVVA 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +L      + + T     I      +YL L+  IA+    + 
Sbjct: 166 VQELTLRSTQLASATFDFFSIFFASGLMYLILTGAIAVIQIVVE 209


>gi|251788997|ref|YP_003003718.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537618|gb|ACT06239.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 229

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 74/174 (42%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T LI G+P LVL+ L +                         +  I L     A+  E 
Sbjct: 52  YTTLIRGVPDLVLMLLIFYGLQMALNSVTETLGMDQIDIDPLAAGIITLGFIYGAYFTET 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   +AVPRGQ+EAA+A G +  K  R ++ P  MR  +P + + +  +LK+++L   +
Sbjct: 112 FRGAYLAVPRGQIEAAVAFGFSPMKVFRRIMFPSMMRFALPGIGNNWQVILKSTALVSLL 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G +D++ V       T       ++   +YL  + +    +  L  + +   +K
Sbjct: 172 GLSDVIKVTQLAGKGTHHPFFFAIVAGVLYLIFTTLSNGVLWWLEKRYSQGVRK 225


>gi|170735289|ref|YP_001774403.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169821327|gb|ACA95908.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 225

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/199 (26%), Positives = 80/199 (40%), Gaps = 4/199 (2%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +     V  L     +       G      Y  T  + G+P  +++ + Y   F    L
Sbjct: 21  LALAALCVGMLLGIAGASAKLSGVGWLTHATYALTNFLRGIPEFLILLICY---FGLSHL 77

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
               F G   +SP F +  IAL+    A+ +E+ R   IAVP GQ+EAA A G++  +  
Sbjct: 78  LNAQFDGAIVISP-FSAGVIALAVVFGAYASEMFRGAFIAVPAGQIEAARAYGMSRLQTL 136

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQA R  +P L + + NLLK++SL   VG  D++         T Q     +   
Sbjct: 137 WHVRLPQAWRICLPSLNNMWQNLLKDTSLVSIVGLEDMLRKANIAAQFTKQPFVFYVTVG 196

Query: 372 FIYLSLSIMIALFMNRLNA 390
            +Y             L  
Sbjct: 197 IVYFGFLAASNPVFAWLER 215


>gi|311280449|ref|YP_003942680.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749644|gb|ADO49396.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 246

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T   R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFIVGSLFGILRTVPHRALSSL 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   +      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVIPELLPENIGTWFKSELDPNIQF-----------FVS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMNLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A I+G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFIVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   ++ ++ +  +YVE+FRN+P +V  F  Y  +  +LP    + 
Sbjct: 53  LRTVPHRALSSLGTLYVELFRNVPLIVQFFTWYLVIPELLPENIGTW 99


>gi|293605310|ref|ZP_06687696.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292816366|gb|EFF75461.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 280

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 11/224 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            +        +  N +I V +  LG +L L    LS     +  + L   Y+  F    +
Sbjct: 63  WQWSPALLRGLGMNIQISVLAMALGTLLGLVVGALS-LSPSRLVRRLMRAYVLLFRNAPI 121

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV     Y   FD       N  G     P+++ + I L    +A +AEI R  + ++
Sbjct: 122 LVLVY-FTTYVFPFD------INLAGWRLPFPDWIKVVIGLGLPASANVAEIFRGAIQSI 174

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV-- 350
           P  Q EAA +L     +  R+V+LPQ +R ++P   +   ++  ++SLA  VG  DLV  
Sbjct: 175 PSAQWEAAQSLAFRRTQIFRMVVLPQCVRRMLPSWMNLLASITMSTSLASLVGVHDLVDT 234

Query: 351 -SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +V    + ++   I +    + ++ +    IA +   L  + A
Sbjct: 235 ATVASNTVARSDFTILVYFTLLALFFAYCYPIARWTRYLERRHA 278



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 44/97 (45%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
                   +   ++ A+L G      ++   M   T++G +VGA  LS ++LV  + R Y
Sbjct: 53  GTTPAAVQALWQWSPALLRGLGMNIQISVLAMALGTLLGLVVGALSLSPSRLVRRLMRAY 112

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V +FRN P LV+++F        + +    +  P  +
Sbjct: 113 VLLFRNAPILVLVYFTTYVFPFDINLAGWRLPFPDWI 149


>gi|262362593|gb|ACY59314.1| glutamate/aspartate transport system permease [Yersinia pestis
           D106004]
          Length = 205

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 6/209 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M    KI + + V GI+       + R    K        Y++ F       LV++ L +
Sbjct: 1   MIVTVKITLIAIVFGILWGTIL-AVMRLSPIKAISWFATAYVNVFRSIP---LVMVLLWF 56

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L    P   Q             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+A
Sbjct: 57  YL--VVPGFLQNVLGLSPKTDIRLISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALA 114

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T  ++ RLV+LPQA R+++P L +Q + L +++SL   +  AD      TI  + G 
Sbjct: 115 LGMTQGQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGT 174

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +E++L    +Y  +SI  ++ +N L  +
Sbjct: 175 QVEMVLFAGLVYFVISISASMLVNYLKKR 203



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 32/61 (52%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            + T  +    ++   + GT++   RLS  K ++W    YV VFR+IP ++V+ + Y  V
Sbjct: 1   MIVTVKITLIAIVFGILWGTILAVMRLSPIKAISWFATAYVNVFRSIPLVMVLLWFYLVV 60

Query: 153 L 153
            
Sbjct: 61  P 61


>gi|260461090|ref|ZP_05809339.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033124|gb|EEW34386.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 215

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 14/222 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +    L       + + +F+ G ++ +      R       + +   YI+ F  
Sbjct: 4   FTLWDIIRNLLLAARWTVLLSLAAFIGGAIVGMIVLFF-RISKNTWSRRIASGYIALF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L       G  + P + +  I L+ + +A++AEI RSG+
Sbjct: 61  QGTPLLMQLFLMF---FGLPML-------GLRIEP-WTAAVIGLTFFASAYLAEIWRSGV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ +A  +LGL + +  RL++LPQA      P     + L+K+++L   +GF +L
Sbjct: 110 DALPLGQWDAGASLGLHYLQELRLIILPQAFSITRAPTVGFLVQLIKSTALTSIIGFEEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           V     I N T +  ++  +   I+  +   +  +  RL   
Sbjct: 170 VRTSNAINNATFEPFKVYGLVALIFFVMCFPLTQYARRLEKH 211



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 37/108 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+ +  I   I+G +V   R+S N     I   Y+ +F+  P L
Sbjct: 7   WDIIRNLLLAARWTVLLSLAAFIGGAIVGMIVLFFRISKNTWSRRIASGYIALFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           + +F ++  +  +    +       G+                +A   
Sbjct: 67  MQLFLMFFGLPMLGLRIEPWTAAVIGLTFFASAYLAEIWRSGVDALPL 114


>gi|221197220|ref|ZP_03570267.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia multivorans CGD2M]
 gi|221203892|ref|ZP_03576910.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia multivorans CGD2]
 gi|221210915|ref|ZP_03583895.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD1]
 gi|221169871|gb|EEE02338.1| octopine transport system permease protein OccM [Burkholderia
           multivorans CGD1]
 gi|221176058|gb|EEE08487.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia multivorans CGD2]
 gi|221183774|gb|EEE16174.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Burkholderia multivorans CGD2M]
          Length = 237

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S VLG  L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIVLGFALAVPL-AIARASSNRWISGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A     AA+  EI    + A P G++EA +A G++
Sbjct: 84  SLQVVHDHVLLD-AFFRNAMNCTLLAFVLNEAAYATEIFAGAIKATPSGEIEAGMAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    V+LP A+R  +P  +++ + +L  ++LA      D++ V   + + T  + + 
Sbjct: 143 RFKLYTRVILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   IY  +   +     +L A+
Sbjct: 203 YGIAAVIYAVVVFALIWAFRKLEAR 227



 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    ++    +   +   R S+N+ ++    +
Sbjct: 5   VSQYWQNYLYTDGYR---FSGLAITLWLLVVSIVLGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLDAFFRNAMNCTLLAFVLNEAAYATEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|254477830|ref|ZP_05091215.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214028415|gb|EEB69251.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 250

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I   +F +G+++ LF     + +     +   LL I T +I  +P LVLI + Y +  
Sbjct: 36  LQIAFGAFGMGLIIGLFG-AYGKLYGGPVLRD--LLAIYTTVIRAVPELVLILILYYVGT 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D                   ++    L     A+  E++R  + AVP GQ+EAA A G+ 
Sbjct: 93  DLINKAATAMGYDRVEISGIVAGIWVLGIVQGAYATEVLRGAIKAVPPGQIEAARAYGMP 152

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M    P L + +L   K+++L   VGFA+L        + T      
Sbjct: 153 AFMTMRRVTIPAMMSFATPGLANLWLIATKDTALLAIVGFAELTLETRQAASSTRAYFTF 212

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L    +YL +++   L    +  
Sbjct: 213 FLAAGALYLLVTLFSGLIFGWIER 236



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G +N+  +AF       IIG     G+L    ++  +  +Y  V R +P LV+
Sbjct: 24  WGGNLLRGLLNSLQIAFGAFGMGLIIGLFGAYGKLYGGPVLRDLLAIYTTVIRAVPELVL 83

Query: 145 IFFLYKSVL 153
           I  LY    
Sbjct: 84  ILILYYVGT 92


>gi|212711636|ref|ZP_03319764.1| hypothetical protein PROVALCAL_02711 [Providencia alcalifaciens DSM
           30120]
 gi|212685738|gb|EEB45266.1| hypothetical protein PROVALCAL_02711 [Providencia alcalifaciens DSM
           30120]
          Length = 250

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 106/234 (45%), Gaps = 9/234 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +  +N          D   +    + ++ ++    +  L                 
Sbjct: 1   MDFSVITDNWQYLLFGAYPDGPLEGAALTLIMSVLAGAASIVLGTLGGIALAMLRGFWMN 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               + G    + +I L +  +F  P++         T  P   ++  AL+  T+A++A 
Sbjct: 61  LFAAVLGFFRAIPVIMLIFWTYFLLPIVFG-------TEIPGVTAVVCALALITSAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V++G++A+ +GQ  A ++LG    +    V+LPQA+R ++P   +Q++ L+K++SLA  
Sbjct: 114 GVKAGILAIGQGQWNAGLSLGFNRWQVLWNVVLPQALRMMVPSFINQWVALIKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           VG A+L  +   + N+     +E+ L   FIY  + + + +  N++  K++ K 
Sbjct: 174 VGVAELSFLATQVNNREMIYPLEVFLFVAFIYFVMCLSVEILANQVAKKLSDKR 227


>gi|293554038|ref|ZP_06674638.1| ABC-type amino acid transport system, permease component
           [Enterococcus faecium E1039]
 gi|293569787|ref|ZP_06680874.1| ABC-type amino acid transport system, permease component
           [Enterococcus faecium E1071]
 gi|291587535|gb|EFF19412.1| ABC-type amino acid transport system, permease component
           [Enterococcus faecium E1071]
 gi|291601820|gb|EFF32072.1| ABC-type amino acid transport system, permease component
           [Enterococcus faecium E1039]
          Length = 218

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 19/226 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T++ +    +FSF++G +  +        F +  G          
Sbjct: 7   FSWMNIRFLLEGLKVTVEVSLFSIIFSFLIGGLTGVIRFANIPFFSKILG---------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I  +  L L+ + +  +F  P +              F S   AL+ + +A ++EI R
Sbjct: 57  VVIDIIRNLPLLLIIFFTYFALPQI--------GIQMNIFWSAVAALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL AVP+GQMEA ++ GLT+ +  R ++LPQA +S+IP + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 42/106 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +I + +IG L G  R +     + I  V +++ RN+P 
Sbjct: 8   SWMNIRFLLEGLKVTVEVSLFSIIFSFLIGGLTGVIRFANIPFFSKILGVVIDIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L++IFF Y ++  +    +        + +    +         NA
Sbjct: 68  LLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNA 113


>gi|260768890|ref|ZP_05877824.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           furnissii CIP 102972]
 gi|260616920|gb|EEX42105.1| arginine/ornithine ABC transporter permease protein AotQ [Vibrio
           furnissii CIP 102972]
          Length = 246

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 10/206 (4%)

Query: 202 LFATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKPVL 251
           L   R +R     +    + +P L +   + FG   L+  +L               P  
Sbjct: 41  LAPYRWARAIATVYTTIIRGIPDLVLMMLIFFGGQILLNNSLYAINEWLNNWFMSSDPNH 100

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              +++        F++  + +     A++AE  R  ++AV +G++EAA A G++   A 
Sbjct: 101 EWVSYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMSAALAF 160

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R +LLPQ +R  +P   + +L LLK ++L   +G  D+V +       T       +   
Sbjct: 161 RRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKMPFTFYMAVS 220

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            I+L  + +    +  +  K ++  +
Sbjct: 221 IIFLLFTSVSTGLLKIVERKFSIHTR 246



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G V T  +A   ++ A ++G L    +L+  +    I  VY  + R IP LV+
Sbjct: 7   YEASIFKGAVLTIEVAVLSLLLAMLLGMLGALAKLAPYRWARAIATVYTTIIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + ++    ++  +           L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYAINEWLNNWFMSSDPNHEWVSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|59802319|ref|YP_209031.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|194099717|ref|YP_002002852.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999906|ref|ZP_04719830.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae 35/02]
 gi|240013147|ref|ZP_04720060.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae DGI18]
 gi|240015590|ref|ZP_04722130.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA6140]
 gi|240081802|ref|ZP_04726345.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA19]
 gi|240114081|ref|ZP_04728571.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae MS11]
 gi|240114680|ref|ZP_04728742.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID18]
 gi|240116882|ref|ZP_04730944.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID1]
 gi|240120218|ref|ZP_04733180.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID24-1]
 gi|240126636|ref|ZP_04739522.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae SK-92-679]
 gi|240127226|ref|ZP_04739887.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae SK-93-1035]
 gi|254492736|ref|ZP_05105907.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268595715|ref|ZP_06129882.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           35/02]
 gi|268597901|ref|ZP_06132068.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           FA19]
 gi|268600151|ref|ZP_06134318.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           MS11]
 gi|268600324|ref|ZP_06134491.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID18]
 gi|268602556|ref|ZP_06136723.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID1]
 gi|268685217|ref|ZP_06152079.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268685585|ref|ZP_06152447.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|293397954|ref|ZP_06642160.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|59719214|gb|AAW90619.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|193935007|gb|ACF30831.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae NCCP11945]
 gi|226511776|gb|EEH61121.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268549104|gb|EEZ44522.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           35/02]
 gi|268551689|gb|EEZ46708.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           FA19]
 gi|268584282|gb|EEZ48958.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           MS11]
 gi|268584455|gb|EEZ49131.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID18]
 gi|268586687|gb|EEZ51363.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID1]
 gi|268625501|gb|EEZ57901.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268625869|gb|EEZ58269.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291611900|gb|EFF40969.1| polar amino acid transport system permease [Neisseria gonorrhoeae
           F62]
 gi|317165201|gb|ADV08742.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 219

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+G++AVP+GQ+ A  A+GL+  +  R V LPQ     +P + +  L L+K +S+  
Sbjct: 103 EAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSVVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            VG A+L+ V   +I    +  E + +    YL + + ++L   R+  ++ 
Sbjct: 163 TVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENRVR 213



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|294637496|ref|ZP_06715782.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella
           tarda ATCC 23685]
 gi|291089328|gb|EFE21889.1| glutamate/aspartate ABC transporter, permease protein [Edwardsiella
           tarda ATCC 23685]
          Length = 246

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 4/188 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EF 266
           R    +    L  LY+  F    +P +V     Y +  +       N+  G    P   F
Sbjct: 54  RTLPSRPLATLGALYVELF--RNVPLIVQFFTWYLVVPELLPTDWGNWFKGELDPPIQFF 111

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  + L  +TAA + E VR+ + A+PRGQ  A +ALG T  +  R VLLP A R I+PP
Sbjct: 112 VSSLLCLGLFTAARVCEQVRAAINALPRGQKNAGLALGFTLAQTYRYVLLPNAYRVIVPP 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y++++ ++ L M+
Sbjct: 172 LTSEMLNLVKNSAIASTIGLLDMAAQAGKLLDYSAHAYESFTAITLAYIAINALLMLGMH 231

Query: 387 RLNAKIAL 394
            L  ++ L
Sbjct: 232 LLERRLQL 239



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   E A F            ++Y   I  G   T  L+ +  + A ++G+L+G 
Sbjct: 3   IDWNWGIFLEPAPFG----------GTTYLGWIGSGMQVTLALSAAAWLIALLLGSLLGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   ++ +A +  +YVE+FRN+P +V  F  Y  V  +LP    + 
Sbjct: 53  LRTLPSRPLATLGALYVELFRNVPLIVQFFTWYLVVPELLPTDWGNW 99


>gi|209546927|ref|YP_002278845.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538171|gb|ACI58105.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 225

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 9/234 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F +F+                 + +    + +V+  F   L+    +K  +     Y
Sbjct: 1   MFDFDLFVTALFGWPLAKGAMLTLVLSILVMAVSLVIGSFFG-LAAGSKKKLPRWSIASY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F       ++L        F    L Q + +  +     F++ ++AL+    A++ E
Sbjct: 60  IWLFRGAPALLILL--------FIWNGLPQLSQVFRAAWFSPFVAAFLALTLIEVAYLTE 111

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RS   AV RGQ E A ALG    +   LV LPQAMR  +P L +++++LLK++SLA  
Sbjct: 112 ILRSAFAAVGRGQREGAEALGFHRWQIFFLVTLPQAMRIAVPALVNEFISLLKSTSLATV 171

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   +L++V    I  + + +E     +  Y+++  ++ +   ++  +++   +
Sbjct: 172 ISLKELMTVTQFAIATSFRFLEWYGAALVYYMAMVSVLTVVQIKVERRLSRGHR 225



 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G + T  L+   M  + +IG+  G    S  KL  W    Y+ +FR  P L++
Sbjct: 12  FGWPLAKGAMLTLVLSILVMAVSLVIGSFFGLAAGSKKKLPRWSIASYIWLFRGAPALLI 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
           + F++  +  +  +   +   PF
Sbjct: 72  LLFIWNGLPQLSQVFRAAWFSPF 94


>gi|261314497|ref|ZP_05953694.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261303523|gb|EEY07020.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
          Length = 357

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L+  V  V+             ++         +T+  +      S  LGI
Sbjct: 108 IPKKGLNAILFFLVFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGI 167

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I       L T++ +A      F  P         
Sbjct: 168 VLAL-----GRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP--------- 213

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 + +   I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQ
Sbjct: 214 -GVTFDKLLRALIGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQ 272

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +     +             ++   F+
Sbjct: 273 ALKLVIPGIVNTFIGLFKDTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFV 332

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +   +  ++    K+
Sbjct: 333 FWIFCFAMSRYSIFMERRLDTGHKR 357



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 144 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 203

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 204 SVMLPLFLPP 213


>gi|229587793|ref|YP_002869912.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229359659|emb|CAY46507.1| putative amino acid ABC transport-system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 219

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 13/226 (5%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G+ L    L            I   S     V  +    L R  + +   A+  +Y+  F
Sbjct: 5   GLELLWVSLPQLGKGAAQTLSISFLSIAFSTVGGVLYGVL-RTLNNRLINAVLRVYLELF 63

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P LV +   Y L F  P+    +        P F    + LS + A+ + E+VR 
Sbjct: 64  --RAIPVLVWL---YLLFFGLPIFFGLSI-------PSFWCAVLVLSLWGASEVGEVVRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L ++PRGQ EA +++GL+  +    VLLPQA++ + PP  + Y  ++K SSLAV +G  
Sbjct: 112 ALHSLPRGQREAGLSIGLSDPQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVV 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           D++ VG  II +T +++ I  +    +  +   ++     L  + A
Sbjct: 172 DVIKVGQQIIERTYESVLIYGVLFLFFFFICYPLSAASKVLERRWA 217



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  +T+ G L G  R   N+L+  + RVY+E+FR IP LV ++ L
Sbjct: 16  LGKGAAQTLSISFLSIAFSTVGGVLYGVLRTLNNRLINAVLRVYLELFRAIPVLVWLYLL 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|187921592|ref|YP_001890624.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187720030|gb|ACD21253.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 245

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L +    +     + V ++ L +V+      L R    +    L   Y+S F   
Sbjct: 18  EHTTYLGWLFSGLLNTVLLTVSAYALALVVGTGFGIL-RTLPSRPASMLGTAYVSVF--R 74

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGL 289
           G+P +V   + + +  +       ++        +F+S+ I +L  YT + I E VR+G+
Sbjct: 75  GVPLIVQFFIWFFVVPELVPTELGDWFKNLPPYTQFLSVSIFSLGIYTGSRICEQVRAGI 134

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRGQ +A  ALGLT  +  R VLLP   R+I+ PLTS++L + KNS++A  +G  +L
Sbjct: 135 QALPRGQFDAGFALGLTRAQTYRYVLLPVTFRTILGPLTSEFLIISKNSAVASTIGLLEL 194

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                 +++ T Q  E  +     Y++L+  I   MN +  
Sbjct: 195 SGQARQLVDYTAQPYESFICVTLAYMALNFAILHGMNWIRR 235



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 45/106 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +  G +NT  L  S    A ++GT  G  R   ++  + +   YV VFR +P +V
Sbjct: 21  TYLGWLFSGLLNTVLLTVSAYALALVVGTGFGILRTLPSRPASMLGTAYVSVFRGVPLIV 80

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             F  +  V  ++P            +     +S  +L + T ++I
Sbjct: 81  QFFIWFFVVPELVPTELGDWFKNLPPYTQFLSVSIFSLGIYTGSRI 126


>gi|89093224|ref|ZP_01166174.1| general amino acid ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
 gi|89082520|gb|EAR61742.1| general amino acid ABC transporter, permease protein
           [Oceanospirillum sp. MED92]
          Length = 366

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/282 (20%), Positives = 120/282 (42%), Gaps = 16/282 (5%)

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPT 180
               +     + + V  +   L   +    S+ + L +P   I++  G ++    +S   
Sbjct: 95  ELWRINLCVLMLIGVIASSQLLNKDWRNKFSIPAFLLLPFVCILILDGSWIGLEYVSTDY 154

Query: 181 LTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                 N  +   S ++   LS F   L R       K++ +L I  F    +     +A
Sbjct: 155 WGGFALNVLLAAASIIVAFPLS-FVWALGRRSEMPFIKSVSILLIEFFRGVPV-----LA 208

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +      P+     F    T   + + ++I L+ + A ++AE+ R G  AVP GQ EA
Sbjct: 209 LFFMGSVMLPL-----FFPEGTNVDKLVRVWIVLTLFMAGYMAEVFRGGFQAVPTGQYEA 263

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGL++ + T L++LPQ ++  +P + + ++ L KN++  + +G  +++S   T +  
Sbjct: 264 ADSLGLSYWQKTLLIILPQVIKVSMPNILATFVMLFKNTTFLLIIGIFEVLSTTQTALTN 323

Query: 360 T----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +    G + E  L    ++      ++     +  K+    K
Sbjct: 324 SNWLGGHSTEGYLFVAIVFWICCYSMSRISASIERKLDTSHK 365


>gi|330429006|gb|AEC20340.1| glutamate/aspartate transport system permease protein [Pusillimonas
           sp. T7-7]
          Length = 142

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/126 (44%), Positives = 81/126 (64%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           +F+++ IALS YTAA  AE++RSG+ AV  GQ +AA ALGLT   + R V+LPQA R I+
Sbjct: 7   QFLTVLIALSLYTAAKAAEVIRSGIQAVSIGQKQAASALGLTEPGSYRHVILPQAFRIIM 66

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTS +LN+ KNSS+A+ +GF +L      I + + Q  E  +    IY  +++ +  F
Sbjct: 67  PPLTSDFLNVFKNSSVALTIGFMELTGQTRQIGDFSSQPFEAYIAATVIYTLVTLSVIWF 126

Query: 385 MNRLNA 390
           M R+  
Sbjct: 127 MRRIEK 132


>gi|297243521|ref|ZP_06927453.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
 gi|296888566|gb|EFH27306.1| ABC-type amino acid transporter, permease component [Gardnerella
           vaginalis AMD]
          Length = 361

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 100/233 (42%), Gaps = 14/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             L      +   + F    +    K  + + V  IV  LF   L R       +++  +
Sbjct: 56  WTLWNPALESEAWVDFYLPGLWMTLKASLLAVVGSIVFGLFFG-LCRLLPNFIIRSISAI 114

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +       +  L++   +              F         + ++ +AL  Y  + +A
Sbjct: 115 VVEFCRAVPVLMLMIFLWR-------------AFALSGMKESSYWAVVLALIMYNGSVVA 161

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VRSG+  +P GQ EA++ALGL+  ++   + +PQA+ +++P   +Q + +LK+++L  
Sbjct: 162 ELVRSGVGNLPNGQREASLALGLSEYQSLTQIEMPQAIIAMMPAAVTQLVVVLKDTALGS 221

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + + DL+     + +     ++ + +   IY  + + ++ F   L + +  +
Sbjct: 222 IIMYTDLLQESRRLGSMYFNILQTLSVAAVIYFLICLALSWFAQWLPSHLKNR 274



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 38/96 (39%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P     ++    L G   T   +   ++ + + G   G  RL  N ++  I  + VE  R
Sbjct: 61  PALESEAWVDFYLPGLWMTLKASLLAVVGSIVFGLFFGLCRLLPNFIIRSISAIVVEFCR 120

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            +P L+++ FL+++             +   + + N
Sbjct: 121 AVPVLMLMIFLWRAFALSGMKESSYWAVVLALIMYN 156


>gi|114769151|ref|ZP_01446777.1| putative amino acid ABC transporter permease protein [alpha
           proteobacterium HTCC2255]
 gi|114550068|gb|EAU52949.1| putative amino acid ABC transporter permease protein [alpha
           proteobacterium HTCC2255]
          Length = 222

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                       T  K+ + S V+ +++S F   L+R       +A+  +Y+  F   G 
Sbjct: 5   FIFWPIIIDGTLTTIKLTLASGVVALIIS-FTVGLARLSRHWVVRAIATIYLEFF--RGT 61

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +V +   Y   F  P+LG F         P  M+  +A      A+ +E+VR+ + +V
Sbjct: 62  SAIVQMFFMY---FVLPLLGVF--------LPALMAGIVACGFNLGAYGSEVVRASVQSV 110

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            R Q EAA AL  T+ +  R VL+PQA+  +IP   +  + LLK +++A  +  +DL  +
Sbjct: 111 GREQREAAKALNYTNFQLYRHVLIPQAIPVMIPSFGNLVIELLKLTAVASLITISDLTFM 170

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  QT   +E +++ M IY  LS ++      L    +   
Sbjct: 171 SQIIRVQTALTLEPLILIMVIYFILSSILVSGTKWLERYFSAGR 214



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 35/69 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I+ G + T  L  +  + A II   VG  RLS + +V  I  +Y+E FR    +V 
Sbjct: 7   FWPIIIDGTLTTIKLTLASGVVALIISFTVGLARLSRHWVVRAIATIYLEFFRGTSAIVQ 66

Query: 145 IFFLYKSVL 153
           +FF+Y  + 
Sbjct: 67  MFFMYFVLP 75


>gi|227821878|ref|YP_002825848.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227340877|gb|ACP25095.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 384

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 20/264 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L  + L ++            +++         +T+  +      S  LGI
Sbjct: 136 IPYKGLNAILLFAALPIVATILLPGGWLGLVYVETAFWGGLMVTLALSFVGIAVSLPLGI 195

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L+L      R       K L  ++I       L T VL      L    P    F+   
Sbjct: 196 LLAL-----GRRSDMPVIKMLCTVFIEIVRGIPLIT-VLFMASVMLPLFLPQGVTFD--- 246

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 +F+   I +S + +A++AE+VR GL A+P+GQ E A +LGL++ +   L++LPQ
Sbjct: 247 ------KFLRALIGVSFFASAYMAEVVRGGLQAIPKGQYEGADSLGLSYWQKMNLIVLPQ 300

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +                I  ++   F+
Sbjct: 301 ALKLVIPGIVNTFIGLFKDTSLVSIIGMFDLLGIVRFNFTDANWATAVTPITGLIFAGFV 360

Query: 374 YLSLSIMIALFMNRLNAKIALKEK 397
           +      ++ +   +   +   ++
Sbjct: 361 FWLFCFGMSRYSGFMERLLDKSQR 384



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 37/72 (51%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           TA   G + T  L+F G+  +  +G L+  GR S   ++  +C V++E+ R IP + V+F
Sbjct: 170 TAFWGGLMVTLALSFVGIAVSLPLGILLALGRRSDMPVIKMLCTVFIEIVRGIPLITVLF 229

Query: 147 FLYKSVLSVLPI 158
                +   LP 
Sbjct: 230 MASVMLPLFLPQ 241


>gi|307942364|ref|ZP_07657715.1| general L-amino acid transport system permease protein AapM
           [Roseibium sp. TrichSKD4]
 gi|307774650|gb|EFO33860.1| general L-amino acid transport system permease protein AapM
           [Roseibium sp. TrichSKD4]
          Length = 384

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 18/266 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P V    L   +  V+       +L    F +          +     + +   V GIV 
Sbjct: 129 PSVPAKGLNAFLFLVMFPIAAYYLLTGLEFGSFVVFPIVETAVWGGLLVTLVIAVTGIVA 188

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           SL    A  L R       K + +++I  +    L T VL      L    P    F+  
Sbjct: 189 SLPLGVALALGRRSQMPIIKLVSIIFIEFWRGVPLIT-VLFMASVMLPLFLPEGVNFD-- 245

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL       L++LP
Sbjct: 246 -------KLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILP 298

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMF 372
           QA++ +IP + + ++ L K+++L + VG  DL+    +  + +  A         L    
Sbjct: 299 QALKLVIPGIVNTFIGLFKDTTLVLIVGMFDLLGQIKSSFSDSTWATPSQGPTGYLFAGV 358

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++      ++ +   +  K+    K+
Sbjct: 359 VFFLFCFGMSRYSIFMEKKLHTGHKR 384



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 39/79 (49%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           TA+  G + T  +A +G++ +  +G  +  GR S   ++  +  +++E +R +P + V+F
Sbjct: 169 TAVWGGLLVTLVIAVTGIVASLPLGVALALGRRSQMPIIKLVSIIFIEFWRGVPLITVLF 228

Query: 147 FLYKSVLSVLPIPDHSIVL 165
                +   LP   +   L
Sbjct: 229 MASVMLPLFLPEGVNFDKL 247


>gi|304398230|ref|ZP_07380104.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304354096|gb|EFM18469.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 229

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 91/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            ++  L    +T++      V + +LG++ +      SR           +    T LI 
Sbjct: 5   YSDVILRGTLVTLELALTSVVLAVLLGLIGAGAKLSRSRPLAM-------IFEGYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +                        ++  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIVLNQVTDALGMAQFDIDPMVAGIITLGFIYGAYFTETFRGAFM 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ+EAA A G T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 AVPQGQIEAATAFGFTSAQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T Q     ++   IYL  + +    +  LN +  +  K+
Sbjct: 178 KATQLAGKSTWQPFYFAIVAGVIYLVFTTLSNGVLWWLNRRYTVGVKR 225



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  IL G + T  LA + ++ A ++G +    +LS ++ +A I   Y  + R +P LV+
Sbjct: 5   YSDVILRGTLVTLELALTSVVLAVLLGLIGAGAKLSRSRPLAMIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|161521538|ref|YP_001584965.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189352292|ref|YP_001947919.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160345588|gb|ABX18673.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189336314|dbj|BAG45383.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 237

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S VLG  L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIVLGFALAVPL-AIARASSNRWISGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A     AA+  EI    + A P G++EA +A G++
Sbjct: 84  SLQVVHDHVLLD-AFFRNAMNCTLLAFVLNEAAYATEIFAGAIKATPSGEIEAGMAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    V+LP A+R  +P  +++ + +L  ++LA      D++ V   + + T  + + 
Sbjct: 143 RFKLYTRVILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   IY  +   +     +L A+
Sbjct: 203 YGIAAVIYAVVVFALIWAFRKLEAR 227



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    ++    +   +   R S+N+ ++    +
Sbjct: 5   VSQYWQNYLYTDGYR---FTGLAITLWLLVVSIVLGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLDAFFRNAMNCTLLAFVLNEAAYATEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|148828330|ref|YP_001293083.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           PittGG]
 gi|148719572|gb|ABR00700.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           PittGG]
          Length = 227

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 6/202 (2%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   L+LF T L    ++   +A+ L      L  G P LV   L Y            +
Sbjct: 26  IAFCLALFLTFLLSMENKWVKRAVNL---YLTLFTGTPLLVQFFLIYAGP--GQFQWIID 80

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 +S  +    +AL+  +AA+  ++    + A+P+GQ E+  ALGL   +    +L
Sbjct: 81  SPLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTL-KIL 139

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +P A++  +P  +++ + + K ++LA  +   D++     +      AI I  I   IYL
Sbjct: 140 IPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYL 199

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            ++ +  L + +L  K+   E+
Sbjct: 200 IITGIATLLLRKLEKKVLAFER 221


>gi|51244882|ref|YP_064766.1| amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50875919|emb|CAG35759.1| probable amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 228

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 105/219 (47%), Gaps = 13/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L +          I   +  LG+ L +    L + +  +  +    LY+  F   G+P L
Sbjct: 18  LPYILQGAGVTLIIVGGAMCLGLALGI-PFALGQVYGPRPVRYFISLYVWFF--RGVPIL 74

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L+ L Y   F+   L                +  + L   +AA+ ++I +  ++++P G
Sbjct: 75  ILMFLFYFGVFELLGLNL----------SALTTTALVLGMTSAAYQSQIFKGAILSLPHG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+ AA ALG+   +A   ++LPQAMR  IP  +++Y  +LK+S+LA  VG  D+ +    
Sbjct: 125 QIRAAEALGMNRPQAICSIVLPQAMRVSIPAWSNEYSIILKDSALAYVVGAMDMFTRTHF 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + ++T + + + +    +YL ++++    + RL  K+ +
Sbjct: 185 VASRTYEHLTLFIFVGLLYLIITVIGVKVLARLEKKLHI 223



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G   T  +    M     +G     G++   + V +   +YV  FR +P L+++F 
Sbjct: 20  YILQGAGVTLIIVGGAMCLGLALGIPFALGQVYGPRPVRYFISLYVWFFRGVPILILMFL 79

Query: 148 LYKSVLSV 155
            Y  V  +
Sbjct: 80  FYFGVFEL 87


>gi|330816078|ref|YP_004359783.1| histidine ABC transporter, permease protein HisM [Burkholderia
           gladioli BSR3]
 gi|327368471|gb|AEA59827.1| histidine ABC transporter, permease protein HisM [Burkholderia
           gladioli BSR3]
          Length = 237

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 87/224 (38%), Gaps = 8/224 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +F + + LS   +T+          FV  I L++      R                T+
Sbjct: 12  FLFWDGQRLSGLAVTLWLLVASIGIGFVCAIPLAVARVSRKRWLSMPV-------RAYTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +    +   + +  +     F    +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLLIYTGMYSLEFVRSHSLLD-AFFRSGFHCAILAFALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A   G++EAA A G+      R V+LP A+R  +P  +++ + +L  +++A      
Sbjct: 124 AIRATSHGEVEAARAYGMGGWTLYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ V     + T  A +   I   IYL++S  +     R    
Sbjct: 184 DILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAFRRAERH 227



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 2/101 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    +    +   R+S  + ++   R Y  VFR  P  V +  +Y
Sbjct: 20  LSGLAVTLWLLVASIGIGFVCAIPLAVARVSRKRWLSMPVRAYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             + S+      S  L    F +    +     ++T A   
Sbjct: 80  TGMYSLEF--VRSHSLLDAFFRSGFHCAILAFALNTCAYTT 118


>gi|296160737|ref|ZP_06843551.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295889040|gb|EFG68844.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 220

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T A   V   ++G ++++      + F  +  + +  +YI  F   G P LV + L Y  
Sbjct: 26  TWAAGVVIGMLIGFLIAVL-----QLFCGRWVRGILRVYIELF--RGTPFLVQLFLLYYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G T+ P   +  + L  Y +A+ AE  RSG  +VP G +EAA  LG
Sbjct: 79  GPSF----------GLTLEP-MTAGVLGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +
Sbjct: 128 LTRWQAVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFV 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E +L+    YL+L  + +       A+IA 
Sbjct: 188 ETLLVLCVCYLALVELTSRAGMWAEARIAR 217



 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 36/81 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T     +G++   +IG L+   +L   + V  I RVY+E+FR  P LV +F L
Sbjct: 16  IAAGLATTLGTWAAGVVIGMLIGFLIAVLQLFCGRWVRGILRVYIELFRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y    S     +       G+
Sbjct: 76  YYGGPSFGLTLEPMTAGVLGL 96


>gi|239931078|ref|ZP_04688031.1| amino acid ABC transporter transmembrane protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291439448|ref|ZP_06578838.1| amino acid ABC transporter integral membrane protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291342343|gb|EFE69299.1| amino acid ABC transporter integral membrane protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 216

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 94/231 (40%), Gaps = 18/231 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  +           +T+       + SFVLG+V +L     +R      G     
Sbjct: 2   KWDWSAVVDFMPYFWDGLLVTLQILVLGSLISFVLGLVWALLMRVPTRWVTWPVGAV--- 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T  +   P LV +   + +                       +   A+  + + + 
Sbjct: 59  ----TEFVRNTPLLVQLFFLFYV-----------LPEWGITFSALTTGVFAIGLHYSTYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++ R+G+ AVP GQ EAA AL L  R+   +V+LPQA+R ++P L +  +++LK++ L 
Sbjct: 104 MQVYRAGIEAVPVGQWEAATALNLPPRRTWTVVILPQAVRRVVPALGNYVISMLKDTPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +A+   +++        Q  Q  E + +    ++ +S + +L +  L  ++
Sbjct: 164 MAITVLEMLGEARLFSQQNFQFTEPLTVIGVAFIVISYLASLALRALERRL 214



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 33/106 (31%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +      G + T  +   G + + ++G +         + V W      E  RN P LV 
Sbjct: 11  FMPYFWDGLLVTLQILVLGSLISFVLGLVWALLMRVPTRWVTWPVGAVTEFVRNTPLLVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +FFL+  +              F + L+    +         A   
Sbjct: 71  LFFLFYVLPEWGITFSALTTGVFAIGLHYSTYTMQVYRAGIEAVPV 116


>gi|296160744|ref|ZP_06843558.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295889047|gb|EFG68851.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 240

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G V        ++    +T + +  +Y + F       LV+    +  
Sbjct: 24  MTVALTLAALAVGAVFGALVAA-AKLSRLRTLRVIGDIYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ RS ++AV RG++EAA A+G
Sbjct: 82  STLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   +YL ++ +     NR  A++    K+
Sbjct: 202 TFFVVGGALYLLMTSISNRVFNRAEARVGRSFKR 235



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 39/92 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+  + T  L  + +    + G LV A +LS  + +  I  +Y  VFR +P L+V
Sbjct: 14  WGGVLLLAALMTVALTLAALAVGAVFGALVAAAKLSRLRTLRVIGDIYTTVFRGVPELLV 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I+  Y    +++            + +    +
Sbjct: 74  IYLFYFGGSTLVTTVGQWFGAEGFVGVPPFVI 105


>gi|297199263|ref|ZP_06916660.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
 gi|197716445|gb|EDY60479.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
          Length = 249

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 13/185 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       +A+  +Y   F    +P L +I L Y           F           F +
Sbjct: 45  RLSRAWPARAVAAVYTEVF--KNVPLLAIIFLTY-----------FGLASAGIRLDVFTA 91

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             ++L  + AA+++EI RS +  V  GQ EA  ALGL        ++LPQA+R  +P   
Sbjct: 92  GCLSLVVFYAAYLSEIFRSAISGVHAGQTEAGEALGLGRAGIFGHIVLPQAVRQALPGTN 151

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  ++LLK++SL V V  A+L+S G  I + T +A+E+ L+   IY +L   ++  +  L
Sbjct: 152 TMLVDLLKSTSLLVTVSAAELMSEGRLITSATFRALEVYLVISAIYFALCYPLSQLLLLL 211

Query: 389 NAKIA 393
             K+ 
Sbjct: 212 ERKVR 216



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y   ++     T        + A ++G  V   RLS       +  VY EVF+N+P L
Sbjct: 10  SDYRPDLVDALWRTVSYTVVSFVGAVLLGLAVALLRLSRAWPARAVAAVYTEVFKNVPLL 69

Query: 143 VVIFFLYKSVLSVLPI 158
            +IF  Y  + S    
Sbjct: 70  AIIFLTYFGLASAGIR 85


>gi|172060591|ref|YP_001808243.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171993108|gb|ACB64027.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 241

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 9/235 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLY 223
           + F + L N          +        S VL I  ++ +  L          A  P+  
Sbjct: 1   MDFSLLLANLPYLLVGAFPEGPLGGAALSLVLAIASAVASAGLGVALGVAMALARGPVRV 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +    I     + ++ L +  +F  PVL   +        P   ++  AL+    A++A 
Sbjct: 61  LLLAFIGFFRAIPVLMLIFWTYFLMPVLLHMDV-------PGLATVVCALALVGGAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++SLA  
Sbjct: 114 AVHAGIVAAGDGQWQAGLSLGLTRWQTVRHVLLPQAIRIMTPSFVNQWVALVKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           VG  +L  V   + N+       I L    IYL L   +      L ++    E+
Sbjct: 174 VGVPELSFVATQVNNRLMVYPAPIFLFVAAIYLVLCTSLDGAARWLLSRGLRAER 228


>gi|323154489|gb|EFZ40690.1| general L-amino acid transport system permease aapQ domain protein
           [Escherichia coli EPECa14]
          Length = 130

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 57/115 (49%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N L+  +  +Y+E+
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLARLSDNWLLRKLSTIYIEI 130


>gi|183597013|ref|ZP_02958506.1| hypothetical protein PROSTU_00245 [Providencia stuartii ATCC 25827]
 gi|188023669|gb|EDU61709.1| hypothetical protein PROSTU_00245 [Providencia stuartii ATCC 25827]
          Length = 250

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 108/207 (52%), Gaps = 13/207 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLY-----ISTFLIFGLPTLVLIALKYQLHFD 247
              L +++SL A  +S  F    G AL +L      +   ++     + +I L +  +F 
Sbjct: 25  GAALTLIISLVAGAMSIVFGTLGGVALAMLRGFWMNLFAAVLGFFRAIPVIMLIFWTYFF 84

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PV+         T  P   S+  AL+  T+A++A  V++G++A+ +GQ +A ++LG + 
Sbjct: 85  LPVVLG-------TEIPGIASVICALALITSAYLAHAVKAGILAIGKGQWQAGLSLGFSR 137

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEI 366
            +    ++LPQA+R ++P   +Q++ L+K++SLA  VG A+L  +   + N+     +EI
Sbjct: 138 WQVLWQIVLPQALRMMVPSFINQWVALIKDTSLAYIVGVAELSFLATQVNNREMVYPLEI 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            L   FIY  + + + +  N +  +++
Sbjct: 198 FLFVAFIYFVICLTLEIVANLIAKRLS 224


>gi|291279626|ref|YP_003496461.1| polar amino acid ABC transporter permease [Deferribacter
           desulfuricans SSM1]
 gi|290754328|dbj|BAI80705.1| polar amino acid ABC transporter, permease [Deferribacter
           desulfuricans SSM1]
          Length = 258

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 19/239 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
                +      +  G  +    +    +T   +   F+ + + G V  +F     R  +
Sbjct: 34  WQWFRVKKLFFEVNEGKLIFGPLIKGLFVTFKISFFSFIITNIFGFVFGIF-----RTLN 88

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
             + + L  LY+  F     P L+ I   Y +            I        F S  IA
Sbjct: 89  SFSARLLGYLYVEIF--RNTPLLIQILFFYFV------------IAPVFNISAFWSAIIA 134

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +S +  A+  EI+R+G+  V  GQ EA+ +LGL   K    ++LPQA++++I PLT+ ++
Sbjct: 135 VSMFEGAYACEIIRAGIENVDTGQWEASYSLGLNTFKTFIYIILPQAIKTVIYPLTNIFV 194

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L+K+S+L   +   DL       I++T    EI +I  F YL ++I+I   +  L+ K
Sbjct: 195 SLIKDSALVSVIAIYDLTMEAQKAISETFMTFEIWIIVAFTYLFINIIITFTIKVLHKK 253



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 11/138 (7%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYAT 87
            +Q+   L L  IF++ V            S G  +      F + +             
Sbjct: 6   LLQVFAFLFLLSIFIFAVFKGAT-------SSGYNWQW----FRVKKLFFEVNEGKLIFG 54

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   TF ++F   I   I G + G  R   +     +  +YVE+FRN P L+ I F
Sbjct: 55  PLIKGLFVTFKISFFSFIITNIFGFVFGIFRTLNSFSARLLGYLYVEIFRNTPLLIQILF 114

Query: 148 LYKSVLSVLPIPDHSIVL 165
            Y  +  V  I      +
Sbjct: 115 FYFVIAPVFNISAFWSAI 132


>gi|227551338|ref|ZP_03981387.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257887548|ref|ZP_05667201.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257896042|ref|ZP_05675695.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|293378786|ref|ZP_06624943.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|227179549|gb|EEI60521.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257823602|gb|EEV50534.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257832607|gb|EEV59028.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|292642579|gb|EFF60732.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 218

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 106/226 (46%), Gaps = 19/226 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T++ +    +FSF++G +  +          +  G          
Sbjct: 7   FSWMNVRFLLEGLKVTVEVSLFSIIFSFLIGGLAGVIRFANIPFLSKILG---------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I  +  L L+ + +  +F  P +              F S   AL+ + +A ++EI R
Sbjct: 57  IVIDIIRNLPLLLIIFFTYFALPQI--------GIQMNIFWSAVAALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL AVP+GQMEA ++ GLT+ +  R ++LPQA +S+IP + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 43/106 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +I + +IG L G  R +    ++ I  + +++ RN+P 
Sbjct: 8   SWMNVRFLLEGLKVTVEVSLFSIIFSFLIGGLAGVIRFANIPFLSKILGIVIDIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L++IFF Y ++  +    +        + +    +         NA
Sbjct: 68  LLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNA 113


>gi|91778282|ref|YP_553490.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690942|gb|ABE34140.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 240

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G V        ++    +T + +  +Y + F       LV+    +  
Sbjct: 24  MTVALTLAALAVGAVFGALVAA-AKLSRLRTLRVIGDIYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ RS ++AV RG++EAA A+G
Sbjct: 82  STLVTNVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   +YL ++ +     NR  A++    K+
Sbjct: 202 TFFVVGGALYLLMTSISNRVFNRAEARVGRSFKR 235



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 39/92 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+  + T  L  + +    + G LV A +LS  + +  I  +Y  VFR +P L+V
Sbjct: 14  WGGVLLLAALMTVALTLAALAVGAVFGALVAAAKLSRLRTLRVIGDIYTTVFRGVPELLV 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I+  Y    +++            + +    +
Sbjct: 74  IYLFYFGGSTLVTNVGQWFGAEGFVGVPPFVI 105


>gi|118587810|ref|ZP_01545220.1| probable amino-acid transmembrane abc transporter protein [Stappia
           aggregata IAM 12614]
 gi|118439432|gb|EAV46063.1| probable amino-acid transmembrane abc transporter protein [Stappia
           aggregata IAM 12614]
          Length = 241

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 16/220 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            + + +F+ G ++    T  +R    KT   +   Y   F    L  L
Sbjct: 22  LFQLLEATQYTIYLSLIAFIGGGLIGACVTA-ARVSPVKTLARIFTAYTWLFQSVPLLML 80

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +      H                    + +  IAL+ YT+A++AE+ R  L A+P G
Sbjct: 81  LFLLGLGIPHL------------FEIQVDPWRAAGIALTLYTSAYLAEVWRGALTAIPSG 128

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E   ALG+T  +   L++LPQA R  I P     + ++K +SLA  +GF DL++VG  
Sbjct: 129 QHEGGKALGMTFAQIMLLIILPQAFRLAIAPTVGFMVQIIKGTSLAYIIGFHDLMTVGKR 188

Query: 356 IINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N      Q   I  +   IY SL   ++++  RL  ++
Sbjct: 189 WANAPVPGTQPFVIYPLMAMIYFSLCFPLSVWSRRLERRL 228


>gi|330901549|gb|EGH32968.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. japonica str. M301072PT]
          Length = 219

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS + G+   +  +   R            L I   L   +P LV + L +   F
Sbjct: 28  LLAIVFSSLGGLCYGVLRSLGKRWLEVP-------LRIYLELFRAIPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL 
Sbjct: 78  GLPIFLGLSI-------PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLG 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  VG  II +T +++ I
Sbjct: 131 LGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   ++     L  +
Sbjct: 191 YGFLFLFFFIVCYPLSAASRVLERR 215



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ +++ G   G  R    + +    R+Y+E+FR IP LV ++  
Sbjct: 16  LITGAGRTLGISLLAIVFSSLGGLCYGVLRSLGKRWLEVPLRIYLELFRAIPVLVWLYLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|262366403|gb|ACY62960.1| glutamate/aspartate transport system permease [Yersinia pestis
           D182038]
          Length = 182

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 5/185 (2%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R    K        Y++ F       LV++ L + L    P   Q             
Sbjct: 1   MRRLSPIKAISWFATAYVNVFRSIP---LVMVLLWFYL--VVPGFLQNVLGLSPKTDIRL 55

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++P 
Sbjct: 56  ISAMVAFSLFEAAYYSEIIRAGIQSISRGQSSAALALGMTQGQSMRLVILPQAFRAMVPL 115

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +Q + L +++SL   +  AD      TI  + G  +E++L    +Y  +SI  ++ +N
Sbjct: 116 LLTQGIVLFQDTSLVYVLSLADFFRTATTIGERDGTQVEMVLFAGLVYFVISISASMLVN 175

Query: 387 RLNAK 391
            L  +
Sbjct: 176 YLKKR 180


>gi|49475424|ref|YP_033465.1| ABC transporter, permease protein [Bartonella henselae str.
           Houston-1]
 gi|49238230|emb|CAF27440.1| ABC transporter, permease protein [Bartonella henselae str.
           Houston-1]
          Length = 239

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 1/189 (0%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + KT KA+  L+ S F       L L  + Y L      +  +  I        F++ 
Sbjct: 49  RSNIKTAKAIATLFSSVFRSL-PELLTLFLVYYGLQSVIQAVLDYFNIEIIFSINAFIAG 107

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS   AAF  E+         +GQ EAA ALGL+       V+ PQ +R+ +P L++
Sbjct: 108 VLALSMVLAAFSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRVVFPQLIRNALPGLSN 167

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +L LLK++SL   +   DL+      +  T + +   L+   +YL  S   +  ++ L 
Sbjct: 168 NWLTLLKDTSLVSTISLVDLMQQTNLAVAATNEPMLFYLVACLLYLLFSAFFSAILHYLE 227

Query: 390 AKIALKEKK 398
            +  L  +K
Sbjct: 228 TRTQLGYQK 236


>gi|49474282|ref|YP_032324.1| ABC transporter, permease protein [Bartonella quintana str.
           Toulouse]
 gi|49239786|emb|CAF26176.1| ABC transporter, permease protein [Bartonella quintana str.
           Toulouse]
          Length = 239

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 92/226 (40%), Gaps = 2/226 (0%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L    F N        L+      + +   +LG  L L +  + R    K  KA+  L+
Sbjct: 4   SLALLSFSNGGWGMVIVLSAGMTLSLALCCGILGFPLGLLSALMIR-SDIKIVKAIATLF 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            S F       L L  + Y L      +  +  I        F++  +ALS   AAF  E
Sbjct: 63  SSVFRGL-PELLTLFLVYYGLQKIIQTVLDYFNIEIIFSINAFIAGVLALSMVLAAFSCE 121

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +         +GQ EAA ALG +       ++ PQ +R+ +P L++ +L LLK++SL   
Sbjct: 122 VWLGAFNIFDKGQYEAAKALGFSRSTTFFRIVFPQLIRNALPGLSNNWLTLLKDTSLVST 181

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +   DL+      +  T + +   L+   +YL  S   +  ++ L 
Sbjct: 182 ISLVDLMQQTNLAVAATNEPMLFYLVACLLYLLFSGFFSAILHYLE 227


>gi|237730632|ref|ZP_04561113.1| glutamate/aspartate transport system permease [Citrobacter sp.
           30_2]
 gi|226906171|gb|EEH92089.1| glutamate/aspartate transport system permease [Citrobacter sp.
           30_2]
          Length = 246

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSGI 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   +      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVIPELLPENIGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMNLV 233

Query: 389 NAKIAL 394
             KI L
Sbjct: 234 ERKIRL 239



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A +IG+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ I  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGIGTLYVELFRNVPLIVQFFTWYLVIPELLPENIGMW 99


>gi|239815920|ref|YP_002944830.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802497|gb|ACS19564.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 352

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 14/194 (7%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R       + L   YI            LI++ +   F  P+L    +          +
Sbjct: 169 GRRSGWPVVRTLSASYIELVRGVP-----LISVLFMASFLLPLLWPAGW-----QPDVLV 218

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            +   L+ + AA++AEI+R GL AVPRGQ E A+ALG       R ++LPQA+R ++P L
Sbjct: 219 RVLAGLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQRDIVLPQALRLVVPAL 278

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAI--EIILIWMFIYLSLSIMIAL 383
           T+  +  LK++SL   VG  +L    G  +    T +    E  L    +Y  L   ++ 
Sbjct: 279 TNSVVGTLKDTSLVTVVGLFELTGALGLALGGDPTWRPFYLEGYLFVAAVYWVLCFGLSR 338

Query: 384 FMNRLNAKIALKEK 397
           +   L  ++    +
Sbjct: 339 YSVWLERRLGEGAR 352



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 32/76 (42%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T  LA  G+  A  +  L+  GR S   +V  +   Y+E+ R +P + V+F   
Sbjct: 142 WGGLPLTIGLAVVGLALAFPLALLLALGRRSGWPVVRTLSASYIELVRGVPLISVLFMAS 201

Query: 150 KSVLSVLPIPDHSIVL 165
             +  + P      VL
Sbjct: 202 FLLPLLWPAGWQPDVL 217


>gi|115352502|ref|YP_774341.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|172061359|ref|YP_001809011.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115282490|gb|ABI88007.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|171993876|gb|ACB64795.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 237

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R    K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKRKWLSGAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +     +  S          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQFIRGTPLLD-SFFRDGMRCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 TFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S M+     +   +
Sbjct: 203 FGIAALLYLVISFMLVWLFRQAERR 227



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL    +     +   +   R+S  K ++    +Y  VFR  P  V +   Y
Sbjct: 20  ITGVAITLWLLVVSIGLGFCLSVPLAVARVSKRKWLSGAVWLYTYVFRGTPLYVQLLLCY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  I    ++  F        L   TL             +
Sbjct: 80  TGLYSLQFIRGTPLLDSFFRDGMRCTLLAFTLNTCAYTTEIFAGAI 125


>gi|289168138|ref|YP_003446407.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
 gi|288907705|emb|CBJ22542.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
          Length = 213

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS  ++T+   A + +FS  LG++++       +  H        L+ I  +++ G P L
Sbjct: 12  LSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKPLHH-------LINIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +P+G
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L        R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFNSFDTVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L+   IYL L  ++ +   ++  K +   
Sbjct: 174 AANRDASLVPMFLVGA-IYLILIGIVTILAKKVEKKYSYYR 213



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G L+        K +  +  +Y+ + R  P L+ + F+
Sbjct: 11  LLSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKPLHHLINIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S+    D          LN 
Sbjct: 71  YYVLPSIGIRLDRLPAAIIAFVLNY 95


>gi|222082708|ref|YP_002542073.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727387|gb|ACM30476.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 221

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 16/223 (7%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLS---LFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            L    L +     + V   +L IV+         L   +     +     Y     I G
Sbjct: 10  QLWIARLAILKGLGLTVSISLLAIVVGSLLGVLVGLCLVYGNPVLRFFVRAYTDF--IRG 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LVL+   Y +                     F +   AL+ + ++ + EIVR GL A
Sbjct: 68  TPVLVLVLASYYV-----------LSTIGIDLGPFQAGVFALAIFCSSHVGEIVRGGLQA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+GQ EAA A+GLT  +    VL PQA+R  +P   +    ++K S+L   +G A+L+ 
Sbjct: 117 IPKGQTEAAKAIGLTFGQTFAYVLWPQALRQFLPAWVNTAAEMVKASTLLSVIGVAELLL 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               II++   +++       +Y  ++  I      +  K A+
Sbjct: 177 RMQEIISRNFMSLQFYFFAGLLYFVINYGIERLGKYVERKTAV 219


>gi|90410450|ref|ZP_01218466.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
 gi|90328691|gb|EAS44975.1| Putative arginine ABC transporter, permease protein [Photobacterium
           profundum 3TCK]
          Length = 223

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 12/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N + +      + T+ ++   S ++G  L+L  T           +   L +IS  +I 
Sbjct: 1   MNEQHVWQMLGGLATSLELTAVSLLVGCTLALLMT------LTLIMRTTGLHWISRGIIT 54

Query: 231 ---GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G P LV I L Y        + + +F+      P F    +AL+  TAA+  ++ + 
Sbjct: 55  LFTGTPLLVQIFLIYYGPGQFEAVRE-SFLWNWLSQPWF-CAMLALALNTAAYSTQLFKG 112

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
              A+P GQ +A  ALG+        VLLP A+R  IP  +++ + + K +SLA  +   
Sbjct: 113 AFNAIPSGQWQACRALGMDKVATL-RVLLPFAIRRAIPAYSNEVILVFKGTSLASTITIM 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DL+     I  QT   + +  +    YL+++ ++ L   ++  K
Sbjct: 172 DLMGYAQRINAQTYDTLIVFSVAGVFYLAVNGILTLIFRQVEKK 215


>gi|322831960|ref|YP_004211987.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321167161|gb|ADW72860.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 228

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   +    +T++      + + V+G++ +      +R      G         T LI 
Sbjct: 5   YSQVIIQGTLVTLELAISSVILALVIGLIGAGGKLSKNRIVSGFFG-------CYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +            +            +  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIALNSVTESLGLTQIDIDPMSAGIITLGFIYGAYFTETFRGAFM 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ+EAA A G +  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 AVPRGQIEAATAFGFSGSQIFRRILFPAMMRFALPGIANNWQVILKATALVSLLGLNDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T Q     ++   +YL  + +    +  L+ + +L  K+
Sbjct: 178 KATQLAGKGTYQPFYFAIVAGVVYLIFTTLSNGVLVWLDRRYSLGVKR 225



 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I+ G + T  LA S +I A +IG +   G+LS N++V+     Y  + R +P LV+
Sbjct: 5   YSQVIIQGTLVTLELAISSVILALVIGLIGAGGKLSKNRIVSGFFGCYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|213970377|ref|ZP_03398506.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301381160|ref|ZP_07229578.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302063126|ref|ZP_07254667.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132573|ref|ZP_07258563.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213924848|gb|EEB58414.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 219

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS V G+   +  +   R            L I   L   +P LV + L +   F
Sbjct: 28  LLAIVFSSVGGLCYGVLRSLGKRWLEIP-------LRIYLELFRAIPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL 
Sbjct: 78  GLPIFFGLSI-------PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLG 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  VG  II +T +++ I
Sbjct: 131 LGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   ++     L  +
Sbjct: 191 YGFLFLFFFIVCYPLSAASRVLERR 215



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ +++ G   G  R    + +    R+Y+E+FR IP LV ++  
Sbjct: 16  LITGAGRTLGISLLAIVFSSVGGLCYGVLRSLGKRWLEIPLRIYLELFRAIPVLVWLYLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|17231658|ref|NP_488206.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC
           7120]
 gi|17133301|dbj|BAB75865.1| permease protein of amino acid ABC transporter [Nostoc sp. PCC
           7120]
          Length = 381

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 19/254 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           +V  +L    L   PI    I   FG+   +  L    L     A I  V SF +G++L+
Sbjct: 141 LVAPWLSLIWLLSFPIILWLIGGGFGLRPVSSNLWNGLLLTLLMAAISIVLSFPIGVLLA 200

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L      R  +    +   +LYI   ++ G+P + ++ L          +    F     
Sbjct: 201 L-----GRTSNLPVVRWFSILYIE--IVRGVPLIGILFLA--------QVMLPLFFAADV 245

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                +     L  ++AA++AE VR GL AV RGQ+EAA ALGL       L++LPQA+R
Sbjct: 246 RLDRVLRAIAGLVLFSAAYMAENVRGGLQAVSRGQVEAAKALGLNTFFVVLLIVLPQALR 305

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLS 378
           ++IP L  Q++ L K++SL   VG  +L  +  +I+ Q    G+  E+ L    IY    
Sbjct: 306 AVIPALVGQFIGLFKDTSLLSLVGLVELTGIARSILAQPQFIGRYAEVYLFIGLIYWLFC 365

Query: 379 IMIALFMNRLNAKI 392
             ++L   RL  ++
Sbjct: 366 YSMSLASRRLERQL 379


>gi|327394993|dbj|BAK12415.1| probable amino-acid ABC transporter permease protein YckJ [Pantoea
           ananatis AJ13355]
          Length = 245

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 13/222 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----RLSRHFHEKTGKALPLLYISTFLIF 230
           + +  LT+   A  F+ +  L + ++L A              K+    PL ++S   + 
Sbjct: 1   MRYQWLTLWQYADTFLAATWLTLQVTLLAFMLALVLGLLAALAKSATFAPLRWLSHGYVE 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +    ++   + + F  P L              F +  +AL     A++AE+ R+G+ 
Sbjct: 61  FIRNTPVLLQIFIVFFGLPSL--------GITMSAFTAGVLALGINVGAYLAEVFRAGIQ 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ+EAA  LG++ R+    V++PQA R++ P + +  + LL  +SL  A+   +L 
Sbjct: 113 SVPKGQLEAAWILGISRRQRFLNVVMPQAARAVWPAIINNLIQLLLGTSLLSAIALPELT 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                I  +T   I+   +   +YL LS + +   N    ++
Sbjct: 173 GTATVINARTLLYIQTFSVVALVYLFLSNLFSWLGNVAGRRL 214



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + +   YA   L     T  +     + A ++G L    + +    + W+   YVE  
Sbjct: 3   YQWLTLWQYADTFLAATWLTLQVTLLAFMLALVLGLLAALAKSATFAPLRWLSHGYVEFI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P L+ IF ++  + S+             + +N
Sbjct: 63  RNTPVLLQIFIVFFGLPSLGITMSAFTAGVLALGIN 98


>gi|291459981|ref|ZP_06599371.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417322|gb|EFE91041.1| L-cystine ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 223

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 103/225 (45%), Gaps = 15/225 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L F   T         FS V  I+L++      R +  +   AL  LY+S F   G 
Sbjct: 14  PKILKFLPATFSLALTSAFFSLVFAILLAII-----RQYRIRGLYALSSLYVSFF--RGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  +   Y                   V   F +L I +S   AAF++E +R+ L +V
Sbjct: 67  PFVAQLFWFYYGLTQ--------IFDAIKVMSPFTALVICMSANYAAFMSEDIRAALNSV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q EA +++G+   +  + ++LPQA R   P L++ ++ + K++S+   +G+ D+++ 
Sbjct: 119 SKAQYEAGLSIGMHPLQTVQRIILPQAARVAAPGLSNHFIGIFKSTSIGFMIGYKDMMAA 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            G   ++  + +E   + + +Y  +  +++    +L  K+ +  K
Sbjct: 179 VGLETSKAYRFLEGYTVSIIVYWVILSILSFGQKKLEEKLNVNYK 223


>gi|315649609|ref|ZP_07902694.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus vortex V453]
 gi|315275082|gb|EFU38457.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus vortex V453]
          Length = 217

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 15/226 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L       +    +  FS VL I +S FA  LSR       + +  +Y+  F   G
Sbjct: 5   WIDFLPTLLKGAEITVLVAFFSAVLAIAMS-FAAGLSRLSKLWIVRTVTAVYVEIF--RG 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              LV +   + L+F  P +            P+ ++  +A+     A+ +EIVRS ++A
Sbjct: 62  TSLLVQL---FWLYFALPFI--------GIELPKMLAAILAIGFNFGAYGSEIVRSAVLA 110

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQ EA++AL +   +    V+LPQA   ++PP  +Q + L+K++SL   +  ADL  
Sbjct: 111 VPKGQWEASVALNMKPWQRMWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADLTY 170

Query: 352 VGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               + N       EI+++ + +Y  ++ ++++ +  L  K     
Sbjct: 171 QAMVLRNNYISWTTEILVLLLLMYFVIATLVSMAVRLLERKWTTGR 216



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  +AF   + A  +    G  RLS   +V  +  VYVE+FR    LV 
Sbjct: 8   FLPTLLKGAEITVLVAFFSAVLAIAMSFAAGLSRLSKLWIVRTVTAVYVEIFRGTSLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +F+LY ++  +       +     +  N 
Sbjct: 68  LFWLYFALPFIGIELPKMLAAILAIGFNF 96


>gi|295111595|emb|CBL28345.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Synergistetes bacterium
           SGP1]
          Length = 220

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 105/232 (45%), Gaps = 15/232 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F   +  + L     T+      F+ +  LG++++L        +     K L  +
Sbjct: 1   MDLNFVGQVFLKMLPALPRTLSVTVLPFIAALFLGLMVTLPI-----VYKIPVLKPLCKV 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F          I   + ++F  P +         +   +     + ++  ++A+++
Sbjct: 56  YVSFFRGTPF-----IGQLFMIYFGLPRM-----FACLSAMDKIEGFVLTMALNSSAYLS 105

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R   +AV RGQ+EAA ++ L+  +  RL+++PQA+   +P + +  ++ +K SSLA 
Sbjct: 106 EIIRGAFLAVDRGQIEAAKSINLSRMQTLRLIVIPQAIPVAVPGIVNVLIDAIKGSSLAF 165

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +G  D+ +V       T +  E  +  + +Y  + +++     R   +I L
Sbjct: 166 TIGILDITAVAKIQAGITFRYFEAYMAMVMMYWFIVLVLEQMQKRYEQRIKL 217


>gi|150398177|ref|YP_001328644.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150029692|gb|ABR61809.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 223

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 15/222 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +    +I + S + G+   LF   ++R +     + L   Y+  F    L  L
Sbjct: 17  LPQLLWGLAVTLQIGITSILCGLAGGLFL-AVARLYSPPFCQFLIRTYVDVFRSIPLLVL 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            LI + Y L F    L              F+S   +LS  +AA+ AEI R+G+ A+P G
Sbjct: 76  -LIVVYYALPFVGIRL------------SPFLSAVTSLSLVSAAYTAEIFRAGIEAIPHG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+ ALGL++R     V+LPQA+R +IPPLT+  +N+LK+++LA  V   DL+     
Sbjct: 123 QFEASAALGLSNRHTMVDVILPQAVRIVIPPLTNNCINVLKDTALASVVAMPDLLKQATQ 182

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                      ++    IY+ L   + + + RL    +   +
Sbjct: 183 AQALAANPTP-LIGAAIIYVMLLWPMVIVVGRLETIFSRGRR 223



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +  + ++     G  +   RL +     ++ R YV+VFR+IP LV++  +
Sbjct: 20  LLWGLAVTLQIGITSILCGLAGGLFLAVARLYSPPFCQFLIRTYVDVFRSIPLLVLLIVV 79

Query: 149 YKSVLSVLPI 158
           Y ++  V   
Sbjct: 80  YYALPFVGIR 89


>gi|307705181|ref|ZP_07642053.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|307621266|gb|EFO00331.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 202

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 2/178 (1%)

Query: 220 PLLYISTFLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYT 277
           PL       + G P LV + L  Y +      L Q    G      P      +A +   
Sbjct: 11  PLQAFFVSFLKGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAAFAIVAFAFNE 70

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +E +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K 
Sbjct: 71  AAYASETIRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKG 130

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +SLA + G  ++ +    +     +  E  +    +Y  ++I I      +  K+A+ 
Sbjct: 131 TSLAFSAGVVEVFAQAQILGGADYRYFERFISVALVYWVVNIGIESLGRFIERKMAIS 188


>gi|308187618|ref|YP_003931749.1| Histidine transport system permease protein [Pantoea vagans C9-1]
 gi|308058128|gb|ADO10300.1| Histidine transport system permease protein [Pantoea vagans C9-1]
          Length = 229

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 9/217 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI---STFLIFGLPTLVLIALK 241
              ++ + S +L ++L L           K  ++ PL  I    T LI G+P LVL+ L 
Sbjct: 15  VTLELALTSVMLAVLLGLIGA------GAKLSRSRPLAMIFEGYTTLIRGVPDLVLMLLI 68

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
           +                        ++  I L     A+  E  R   +AVP+GQ+EAA 
Sbjct: 69  FYGLQIVLNQVTDALGMAQFDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGQIEAAT 128

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T 
Sbjct: 129 AFGFTGAQVFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTW 188

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           Q     ++   IYL  + +    +  LN +  +  K+
Sbjct: 189 QPFYFAIVAGVIYLVFTTLSNGVLWWLNRRYTVGVKR 225



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  IL G + T  LA + ++ A ++G +    +LS ++ +A I   Y  + R +P LV+
Sbjct: 5   YSDVILRGTLVTLELALTSVMLAVLLGLIGAGAKLSRSRPLAMIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|242238548|ref|YP_002986729.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130605|gb|ACS84907.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 246

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 69/246 (28%), Positives = 113/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF--- 211
                     PFG       L     +T+  +   ++ +F+LG +L +  T   R     
Sbjct: 5   WNWGIFLQSAPFGNTTYLGWLISGLQVTVALSICAWIIAFLLGSLLGIMRTVPHRLIAGI 64

Query: 212 ---HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTCYVELFRNVPLIVQFFSWYLVVPELLPTKLGMWFKAELDPNIQF-----------FVS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+G+ ++PRGQ  A +ALGLT  +  R VLLP A R +IPPLT
Sbjct: 114 SMLCLGMFTAARVCEQVRAGIQSLPRGQRAAGLALGLTLPQTYRHVLLPNAYRVVIPPLT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +
Sbjct: 174 SEMLNLVKNSAIASTIGLMDMAAQAGKLLDYSAHAYESFSAITLAYIGVNAIIMLIMQIV 233

Query: 389 NAKIAL 394
             K  L
Sbjct: 234 ERKTRL 239



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   ++ G   T  L+    I A ++G+L+G 
Sbjct: 3   IDWNWGIFLQSAPFG----------NTTYLGWLISGLQVTVALSICAWIIAFLLGSLLGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   ++L+A I   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  MRTVPHRLIAGIGTCYVELFRNVPLIVQFFSWYLVVPELLPTKLGMW 99


>gi|237808390|ref|YP_002892830.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500651|gb|ACQ93244.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 239

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  +I   +F+ GIV+ L    L +    ++    P+L + T ++  +P L+LI   Y  
Sbjct: 27  TTLEISFGAFLAGIVIGL-CCALGKLNGSRSLA--PVLNLYTTVVRAIPELILIIALYYA 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D            S     F +  + L     A+  E++R  ++A+P GQ+EA  A G
Sbjct: 84  GTDSLNAILNALGFESVEINGFATAILVLGIVQGAYATEVIRGAILAIPTGQIEAGKAFG 143

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R ++LP  M + +P L++ + ++ K+S+L   +G+ +L  +     + T    
Sbjct: 144 MPATMRFRRIILPAMMPTALPGLSNLWASVTKDSALIAVLGYQELAMITKLAASNTKFYF 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                   IYL +++      + L  +    + +
Sbjct: 204 FFFCTAALIYLVITLCSNSVFDSLERRFRRGQVR 237



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 37/71 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           + TA+L G V T  ++F   +   +IG     G+L+ ++ +A +  +Y  V R IP L++
Sbjct: 17  WGTALLKGTVTTLEISFGAFLAGIVIGLCCALGKLNGSRSLAPVLNLYTTVVRAIPELIL 76

Query: 145 IFFLYKSVLSV 155
           I  LY +    
Sbjct: 77  IIALYYAGTDS 87


>gi|13470759|ref|NP_102328.1| ABC transporter permease [Mesorhizobium loti MAFF303099]
 gi|14021502|dbj|BAB48114.1| probable permease of ABC transporter [Mesorhizobium loti
           MAFF303099]
          Length = 239

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 4/239 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                +     +  +         +     + + +  +G+ +  F   L +   E + + 
Sbjct: 1   MPAQSIWTLLSWGPDGWSDDIAYGVIVTVLLALATLPIGLTIGFFI-ALGKQSEEPSLRL 59

Query: 219 LPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              +Y + F   GLP LV L    + +      L ++     +     F++  I LS   
Sbjct: 60  AANIYTTVF--RGLPELVTLFLFFFGMPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIF 117

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +++ +E+  S   A+P+GQ E   ++GL+  +  RLV+LPQ +R   P L + +L+LLK+
Sbjct: 118 SSYASEVFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLLRIAFPGLENCWLSLLKD 177

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SL   VG A+ +   G     T  +     I   ++L L+++ +     +   +  +E
Sbjct: 178 TSLVSVVGLAETLRNAGVAARVTKHSFLFYSIAALVFLGLAVVSSFATGAILRSLGKRE 236



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 58/161 (36%), Gaps = 14/161 (8%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             ++  I  G + T  LA + +     IG  +  G+ S    +     +Y  VFR +P L
Sbjct: 15  DGWSDDIAYGVIVTVLLALATLPIGLTIGFFIALGKQSEEPSLRLAANIYTTVFRGLPEL 74

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS- 201
           V +F  +  +  +L            + +N+             A + V S +     S 
Sbjct: 75  VTLFLFFFGMPILLQHLIRYFRPEATIDVNSFV-----------AGMIVLSLIFSSYASE 123

Query: 202 --LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             L A R       + G ++ L    T  +  LP L+ IA 
Sbjct: 124 VFLSAFRAIPKGQYEGGYSIGLSKWQTMRLVILPQLLRIAF 164


>gi|114321289|ref|YP_742972.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227683|gb|ABI57482.1| L-glutamine ABC transporter membrane protein [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 218

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 12/184 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F       +   Y+S  +I G P +V     Y   F  P+       G       F +  
Sbjct: 46  FRIPVINWIVFAYVS--VIRGTPIVVQAMFIY---FALPMALDIVLTG-------FAAAS 93

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+    A+I EIV   ++++ +GQ +A +ALGL++ +    ++ P A R  IPPL +Q
Sbjct: 94  ICLAMNAGAYITEIVCGAVLSIDKGQTDAGLALGLSYPQVMLHIVGPLAFRRSIPPLGNQ 153

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++  LK+S+L + +G A+L   G  +  QTG+A+EI       YL ++  +A+ M  +  
Sbjct: 154 FIISLKDSALFLVIGVAELAQRGEQLTAQTGRALEIWTAVAVFYLIMTFTLAMIMRAIEQ 213

Query: 391 KIAL 394
           ++ +
Sbjct: 214 RMRI 217


>gi|154149257|ref|YP_001406028.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter hominis ATCC BAA-381]
 gi|153805266|gb|ABS52273.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter hominis ATCC BAA-381]
          Length = 235

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 21/223 (9%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                  +TM            LG +L+          + K    +   YI   +I G P
Sbjct: 34  NYCKSYGITMILTIGGTSIGIFLGFILAFLKFA-----NFKILNFIIDEYID--IIRGTP 86

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ + +             F F+  ++ +    +   AL   ++A++AEIVRSG+ ++ 
Sbjct: 87  IVIQLMI-------------FVFVIFASWTNNIAAAVFALGLNSSAYVAEIVRSGINSID 133

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQMEAA A+GL +  + R ++ PQA+++I+P L +++++L K +S+   V   DL    
Sbjct: 134 KGQMEAARAMGLNYTTSMRKIVFPQAIKNILPALANEFISLFKETSVVGMVAITDLTFFS 193

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++   T   ++ IL    IY        L +  L  ++   +
Sbjct: 194 KSLQA-TLYTVQPILFAAVIYYVSVKFFTLLVKLLEKRLNRND 235


>gi|115376859|ref|ZP_01464082.1| amino acid ABC transporter binding protein and permease protein
           [Stigmatella aurantiaca DW4/3-1]
 gi|115366162|gb|EAU65174.1| amino acid ABC transporter binding protein and permease protein
           [Stigmatella aurantiaca DW4/3-1]
          Length = 441

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 17/221 (7%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +     A + +   V  + L++       L R +  +    L   Y+   L+ G P
Sbjct: 234 QGHVVMFFQAAGVTLLVSVGAMALAVPLGLLLALVRLYGPRWLSRLATAYVE--LLRGTP 291

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ +   Y L+F            G      F +  + L    AA+ AE+ R+G++AVP
Sbjct: 292 VLLQL---YVLYFGL---------AGVLRLDAFSAAILGLGLNYAAYEAEVYRAGVLAVP 339

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQMEAA+ALG+T   A R V++PQA R  +P +T+ ++ LLK+SSL   +   +L    
Sbjct: 340 RGQMEAALALGMTTPLALRRVVVPQAFRVALPGVTNDFIALLKDSSLVSVISVVELTKRM 399

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +       +    +   +YL++S  ++     L AK+  
Sbjct: 400 TIVSVDVRSWLLPGALCAALYLAMSYPLSRLARWLEAKLER 440



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                  T  ++   M  A  +G L+   RL   + ++ +   YVE+ R  P L+ ++ L
Sbjct: 240 FFQAAGVTLLVSVGAMALAVPLGLLLALVRLYGPRWLSRLATAYVELLRGTPVLLQLYVL 299

Query: 149 YKSV 152
           Y  +
Sbjct: 300 YFGL 303


>gi|307706790|ref|ZP_07643595.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307617875|gb|EFN97037.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
          Length = 213

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS  ++T+   A + +FS  LG++++       +  H        L+ I  +++ G P L
Sbjct: 12  LSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKLLHH-------LINIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +P+G
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L        R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFNPFATVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 174 AANRDASLVPMFL-AGAIYLILIGIVTILAKKVEKKYSYYR 213



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G L+        KL+  +  +Y+ + R  P L+ + F+
Sbjct: 11  LLSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S+    D          LN 
Sbjct: 71  YYVLPSIGIRLDRLPAAIIAFVLNY 95


>gi|260912991|ref|ZP_05919476.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
 gi|260632981|gb|EEX51147.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Pasteurella dagmatis ATCC 43325]
          Length = 227

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 3/173 (1%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L  G P LV   L Y       V+ Q      S +S  +    + L+  +AA+  ++
Sbjct: 52  YLTLFTGTPLLVQFFLIYAGPGQFDVIVQSPV--WSLLSNAWFCAMLTLALNSAAYTTQL 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
               + A+ +GQ E+  +LGLT  +    +L+P A++  +P  +++ + + K ++LA  +
Sbjct: 110 FHGAVKAISKGQWESCASLGLTRLQTL-KILIPYALKRALPSYSNEIILVFKGTALASTI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              D++     +      A+ I  I   IYL ++ +  + + +L +++   E+
Sbjct: 169 TIMDIMGYARQLYGTEYDALTIYGIAGAIYLVITGIATVLLRKLESRVLSFER 221


>gi|16264463|ref|NP_437255.1| putative amino acid uptake ABC transporter permease protein
           [Sinorhizobium meliloti 1021]
 gi|15140600|emb|CAC49115.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
          Length = 228

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +  +  +   + + G V+ L  T           +    LY++  +I   
Sbjct: 19  WRSFDLLLEGLALSLGLAFVAILAGCVIGLI-TAFGLISRRALLRKPAGLYVT--VIRNT 75

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y           F          +  S    L+ Y+ A++AE+ R GLIA+
Sbjct: 76  PILVLVLFSY-----------FALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAI 124

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EA +A+GLT  +    +++P  +RS++P L S  ++L K++SLA A+   +L   
Sbjct: 125 PPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFE 184

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  +T + IE  ++   +Y++   ++A  M     ++A+  
Sbjct: 185 ARKINVETFRVIETWIVASCLYVATCSLLAALMRAAERRLAVPR 228



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           AF  ++   +IG +   G +S   L+     +YV V RN P LV++ F Y ++  +    
Sbjct: 36  AFVAILAGCVIGLITAFGLISRRALLRKPAGLYVTVIRNTPILVLVLFSYFALPELGVRL 95

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                    + + +             A 
Sbjct: 96  GKIESFVATLAIYSGAYLAEVFRGGLIAI 124


>gi|259501521|ref|ZP_05744423.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus iners DSM 13335]
 gi|302191506|ref|ZP_07267760.1| Glutamine ABC transporter, permease protein [Lactobacillus iners
           AB-1]
 gi|309804259|ref|ZP_07698336.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 11V1-d]
 gi|309805507|ref|ZP_07699552.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 09V1-c]
 gi|309808597|ref|ZP_07702489.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 01V1-a]
 gi|309809500|ref|ZP_07703358.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners SPIN 2503V10-D]
 gi|312871490|ref|ZP_07731584.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 3008A-a]
 gi|312872417|ref|ZP_07732486.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2062A-h1]
 gi|312874423|ref|ZP_07734453.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2052A-d]
 gi|312874570|ref|ZP_07734595.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2053A-b]
 gi|325911827|ref|ZP_08174231.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners UPII 143-D]
 gi|325913453|ref|ZP_08175819.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners UPII 60-B]
 gi|329920202|ref|ZP_08277014.1| putative glutamine ABC transporter permease protein GlnP
           [Lactobacillus iners SPIN 1401G]
 gi|259167039|gb|EEW51534.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus iners DSM 13335]
 gi|308163662|gb|EFO65932.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 11V1-d]
 gi|308165158|gb|EFO67396.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 09V1-c]
 gi|308168071|gb|EFO70197.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 01V1-a]
 gi|308170172|gb|EFO72207.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners SPIN 2503V10-D]
 gi|311089961|gb|EFQ48380.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2053A-b]
 gi|311090035|gb|EFQ48449.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2052A-d]
 gi|311091999|gb|EFQ50374.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 2062A-h1]
 gi|311093010|gb|EFQ51360.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LEAF 3008A-a]
 gi|325476333|gb|EGC79495.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners UPII 143-D]
 gi|325477222|gb|EGC80368.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners UPII 60-B]
 gi|328936423|gb|EGG32869.1| putative glutamine ABC transporter permease protein GlnP
           [Lactobacillus iners SPIN 1401G]
          Length = 219

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 15/230 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    +   L F    +     I + S +L  +L LF          +  K   + +I  
Sbjct: 4   FIHAYSWINLRFLLQGLMVTVYISIVSIILSFILGLFLGI------VRYLKIKVISHIVG 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++  L  L L+ + +  +F  P L          V+    +  IAL  +  A +AEIVR
Sbjct: 58  FIVDILRNLPLLLIIFFAYFGLPQL--------GIVTNVTCAAIIALVVFEGAMLAEIVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ AV +GQ+E A++ G+T+ +A   V++PQA+  +IP + SQ+++L+K++SLA  +  
Sbjct: 110 SGIGAVNKGQLEGALSNGMTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVL 169

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L+     I +Q T   + + +I   +Y  +   ++L  + L  + + K
Sbjct: 170 PELLYHAQIIYSQNTTYLLPMYVIVALMYFIICFTLSLIADHLQKQYSAK 219



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 38/76 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G + T +++   +I + I+G  +G  R    K+++ I    V++ RN+P 
Sbjct: 9   SWINLRFLLQGLMVTVYISIVSIILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           L++IFF Y  +  +  
Sbjct: 69  LLIIFFAYFGLPQLGI 84


>gi|121610276|ref|YP_998083.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554916|gb|ABM59065.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 223

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 107/237 (45%), Gaps = 15/237 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                    ++ + + VLG+++++ A    +       + +   
Sbjct: 1   MNYQFEFGAVFAAWPLLLKGTLMTLELSLSATVLGLIVAI-ACAWGKTSGPLPVRLVVNA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   LI   P LV +               F             +  IA+     A+  
Sbjct: 60  YIE--LIRNTPFLVQLFFF-----------FFALPAIGLRWSPHTAALIAMVVNLGAYAT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++P+GQ+EA +AL L   +  RLV+L  A+R+I P L+SQ++ L+  SS+  
Sbjct: 107 EIIRAGIESIPKGQIEAGLALNLKAHQIFRLVVLKPALRAIFPALSSQFILLMLTSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK-IALKEKK 398
            +   DL SV   + ++T ++ EI ++   IYLSL+++ +     +  + ++  +++
Sbjct: 167 VISADDLTSVAANLQSRTFRSFEIYIVVTAIYLSLALIFSFIFRTIERRSLSYPDRR 223



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G + T  L+ S  +   I+      G+ S    V  +   Y+E+ RN P LV +
Sbjct: 14  WPLLLKGTLMTLELSLSATVLGLIVAIACAWGKTSGPLPVRLVVNAYIELIRNTPFLVQL 73

Query: 146 FFLYKSVLSV 155
           FF + ++ ++
Sbjct: 74  FFFFFALPAI 83


>gi|331016474|gb|EGH96530.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 219

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS V G+   +  +   R            L I   L   +P LV + L +   F
Sbjct: 28  LLAIVFSSVGGLCYGVLRSLGKRWLEIP-------LRIYLELFRAIPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL 
Sbjct: 78  GLPIFFGLSI-------PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLG 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  VG  II +T +++ I
Sbjct: 131 LGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   ++     L  +
Sbjct: 191 YGFLFLFFFIVCYPLSAASRVLERR 215



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ +++ G   G  R    + +    R+Y+E+FR IP LV ++  
Sbjct: 16  LITGAGRTLGISLLAIVFSSVGGLCYGVLRSLGKRWLEIPLRIYLELFRAIPVLVWLYLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|317491411|ref|ZP_07949847.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920958|gb|EFV42281.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 222

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 82/178 (46%), Gaps = 3/178 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L+     L  G P LV I L Y        + Q  ++      P ++   +AL+  +AA+
Sbjct: 47  LVQGYITLFTGTPLLVQIFLIYYGPGQFDWIKQTPWLWNMLSQP-WLCAMVALALNSAAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             ++    + A+P GQ ++  ALG++  +    +LLP A +  +   +++ + + K++SL
Sbjct: 106 TTQLFYGAVKAIPSGQWQSCEALGMSRSQTL-RILLPFAFKRALSSYSNEVVLIFKSTSL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A  +   +++     +  +T   + +      IYL ++ ++ L M  +  +    E++
Sbjct: 165 AYTITLMEVMGYSQQMYGRTYDVM-VFGAAGVIYLCVNGLLTLIMRMVERRALAFERR 221


>gi|291618613|ref|YP_003521355.1| YckJ [Pantoea ananatis LMG 20103]
 gi|291153643|gb|ADD78227.1| YckJ [Pantoea ananatis LMG 20103]
          Length = 245

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 13/222 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-----RLSRHFHEKTGKALPLLYISTFLIF 230
           + +  LT+   A  F+ +  L + ++L A              K+    PL ++S   + 
Sbjct: 1   MRYQWLTLWQYADTFLAATWLTLQVTLLAFMLALVLGLLAALAKSATFAPLRWLSHGYVE 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +    ++   + + F  P L              F +  +AL     A++AE+ R+G+ 
Sbjct: 61  FIRNTPVLLQIFIVFFGLPSL--------GITMSAFTAGVLALGINVGAYLAEVFRAGIQ 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ+EAA  LG++ R+    V++PQA R++ P + +  + LL  +SL  A+   +L 
Sbjct: 113 SVPKGQLEAAWILGISRRQRFLNVVMPQAARAVWPAIINNLIQLLLGTSLLSAIALPELT 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                I  +T   I+   +   +YL LS + +   N    ++
Sbjct: 173 GTATVINARTLLYIQTFSVVALVYLFLSNLFSWLGNVAGRRL 214



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + +   YA   L     T  +     + A ++G L    + +    + W+   YVE  
Sbjct: 3   YQWLTLWQYADTFLAATWLTLQVTLLAFMLALVLGLLAALAKSATFAPLRWLSHGYVEFI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P L+ IF ++  + S+             + +N
Sbjct: 63  RNTPVLLQIFIVFFGLPSLGITMSAFTAGVLALGIN 98


>gi|73661928|ref|YP_300709.1| putative ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494443|dbj|BAE17764.1| putative ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 227

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 109/222 (49%), Gaps = 9/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      +     + V S +  ++L      L+    +K     P++ +    I  
Sbjct: 6   WLDLLYQVLQQLPLTLLMIVLSLIFALILGFI---LATIRLQKIKLLSPVVKVYISFIRS 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L+ + L Y   F  P L  F  I  +  S  F  + +A + +T A+++EI+R+G  +
Sbjct: 63  TPLLLQLFLVY---FALPQLLLFVHIDINHFSRLFF-VILAFTLHTGAYLSEIIRAGYQS 118

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V   Q+EA +++GLT+ +  + ++LPQA+R+ IP LT+Q + L+K++SLA  +G  D++ 
Sbjct: 119 VDYRQIEAGLSIGLTYPRILKEIILPQALRNSIPNLTTQIIELVKDTSLAFTIGIIDMMG 178

Query: 352 VGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAK 391
               II        +E+ ++   +Y  ++++I      ++ +
Sbjct: 179 QVKLIIGNNYGLGMLEVYIVISVVYWLIALIIQGVFTIIDKR 220



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 33/60 (55%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    +I A I+G ++   RL   KL++ + +VY+   R+ P L+ +F +Y ++  +
Sbjct: 20  TLLMIVLSLIFALILGFILATIRLQKIKLLSPVVKVYISFIRSTPLLLQLFLVYFALPQL 79


>gi|222106917|ref|YP_002547708.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221738096|gb|ACM38992.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 222

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 96/222 (43%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L        T   I+V   VLGIV+  F     R +  +    +PL  +   ++ G P 
Sbjct: 11  HLPEIFSGATTTLWIWVVGMVLGIVVG-FLVATGRRYGGRFLD-IPLGLV-VEVLRGTPF 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ I L Y             ++G S          I L+ Y+AA+ +EI R+G  +VP 
Sbjct: 68  LIQIFLVYYGG---------PYVGLSL--DPIPCGLIGLTVYSAAYYSEIFRAGYGSVPH 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G +EAA  LGLT  +  R +LLP+    ++PP  +  + LLK S++   +   +L +   
Sbjct: 117 GHVEAAECLGLTRLQIIRRILLPEMALIVLPPCVNLAIILLKESAVLSIITVPELTATVS 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I +     +E I +   IY  +    A    +  A+++   
Sbjct: 177 AIGSAQYAFLEAIFVLAVIYWVIVEATAWAARKTEARLSRLR 218



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G   T W+   GM+   ++G LV  GR    + +     + VEV R  P L+ 
Sbjct: 11  HLPEIFSGATTTLWIWVVGMVLGIVVGFLVATGRRYGGRFLDIPLGLVVEVLRGTPFLIQ 70

Query: 145 IFFLYKSVLSV 155
           IF +Y     V
Sbjct: 71  IFLVYYGGPYV 81


>gi|317492651|ref|ZP_07951078.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919401|gb|EFV40733.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 228

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V S +L + + L     +     ++     +    T LI G+P LVL+ L +  
Sbjct: 15  VTLELAVSSVLLAVAIGLLG---AAAKLSRSSVLTTIFEGYTTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+GQ+EAA +LG
Sbjct: 72  LQMVLNQITDLLGWSQFNIDPLVAGVITLGFIYGAYFTETFRGAFMAVPKGQIEAATSLG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  K  R +L P  MR  +P + + +  +LK ++L   +G  DLV         T Q  
Sbjct: 132 FSASKIFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLDDLVKATQIAGKGTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + +   ++
Sbjct: 192 YFAIVAGAIYLLFTTVSNGVLLMLEKRYSAGVRR 225



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 36/68 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  IL G + T  LA S ++ A  IG L  A +LS + ++  I   Y  + R +P LV+
Sbjct: 5   YSQLILNGALVTLELAVSSVLLAVAIGLLGAAAKLSRSSVLTTIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|260844895|ref|YP_003222673.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O103:H2 str. 12009]
 gi|257760042|dbj|BAI31539.1| histidine/lysine/arginine/ornithine transporter subunit HisQ
           [Escherichia coli O103:H2 str. 12009]
          Length = 228

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGVIYLVFTTVSNGVLLFLECRYSVGVKR 225



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|149926671|ref|ZP_01914931.1| ABC amino acid transporter, inner membrane subunit [Limnobacter sp.
           MED105]
 gi|149824600|gb|EDM83816.1| ABC amino acid transporter, inner membrane subunit [Limnobacter sp.
           MED105]
          Length = 246

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 7/240 (2%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
              +    IV    +       S    T+ T+A   V +F +G ++ +      R    K
Sbjct: 6   NWLLFFQPIVEGETLVWWEMLFSGLLWTLATSAVAGVIAFTVGSLMGVL-----RTASSK 60

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
               L   Y+  F    +P +V   L Y +  +     +   I       +F++  + L 
Sbjct: 61  PLAFLGNAYVELF--RNIPLIVQFFLWYFVVPEFIPALKEWSIEQDPTFVQFLASVVCLG 118

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +TA+ +AE V+SG++++ RGQ  A  ALGLT  +  R VLLP A R I+PP+TS+ +NL
Sbjct: 119 LFTASRVAEQVKSGILSLSRGQRAAGYALGLTEGQTYRFVLLPMAYRIIVPPMTSEAMNL 178

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +KNSS+A+ +G  +L      +   T    E  +    +Y+ +++ +   M  +  + A+
Sbjct: 179 IKNSSVALTIGLTELTFRTREMGEVTFAFFEAYIAATVLYVIVAMSVNRVMALVERRTAV 238



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 42/89 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G + T   +    + A  +G+L+G  R +++K +A++   YVE+FRNIP +V 
Sbjct: 22  WWEMLFSGLLWTLATSAVAGVIAFTVGSLMGVLRTASSKPLAFLGNAYVELFRNIPLIVQ 81

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            F  Y  V   +P      +     F+  
Sbjct: 82  FFLWYFVVPEFIPALKEWSIEQDPTFVQF 110


>gi|148655937|ref|YP_001276142.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus sp. RS-1]
 gi|148568047|gb|ABQ90192.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus sp. RS-1]
          Length = 216

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 95/220 (43%), Gaps = 15/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +F    +     +   +   G+V+ +    ++R +   + +    +Y        +  +
Sbjct: 11  FNFIVQGLWVTISVTAVALTTGVVIGIVL-AIARVYGHPSLQVAVTVYSVVIRAVPVIVI 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + I               F  I        F +  +AL   + A+  EI R  L AV  G
Sbjct: 70  IFIL--------------FFVISRYVNLSPFWAGALALGFASGAYQTEIFRGALQAVQPG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA A+G++  +A + V+LPQA+R  +P   ++   +LK+S+L  AVG  +++     
Sbjct: 116 QMIAARAIGMSRLQAIQSVVLPQALRLALPAWGNEATLVLKDSTLVFAVGVPEILRRAQQ 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +  +T +      + + +YL+L+++    +  L  +  L+
Sbjct: 176 VSARTFEPFLAFGVALLLYLALTMITTQALRWLERRYRLQ 215



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 48/149 (32%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  +    +    +IG ++   R+  +  +     VY  V R +P +V+IF L
Sbjct: 14  IVQGLWVTISVTAVALTTGVVIGIVLAIARVYGHPSLQVAVTVYSVVIRAVPVIVIIFIL 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +   + +           F +    +          +         I +S      S
Sbjct: 74  FFVISRYVNLSPFWAGALALGFASGAYQTEIFRGALQAVQPGQMIAARAIGMSRLQAIQS 133

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVL 237
               +    ALP       L+    TLV 
Sbjct: 134 VVLPQALRLALPAWGNEATLVLKDSTLVF 162


>gi|15901349|ref|NP_345953.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|111657054|ref|ZP_01407850.1| hypothetical protein SpneT_02001719 [Streptococcus pneumoniae
           TIGR4]
 gi|116516529|ref|YP_816792.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|148984846|ref|ZP_01818099.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|148988547|ref|ZP_01819980.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|148992613|ref|ZP_01822281.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|148997437|ref|ZP_01825042.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149003284|ref|ZP_01828180.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|149008125|ref|ZP_01831656.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|149011737|ref|ZP_01832933.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|149021769|ref|ZP_01835776.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483888|ref|ZP_02708840.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1873-00]
 gi|168489663|ref|ZP_02713862.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP195]
 gi|168492572|ref|ZP_02716715.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC0288-04]
 gi|168493402|ref|ZP_02717545.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC3059-06]
 gi|168575958|ref|ZP_02721873.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|169832498|ref|YP_001694909.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|194398715|ref|YP_002038132.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|221232215|ref|YP_002511368.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854945|ref|YP_002736457.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|225857128|ref|YP_002738639.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae P1031]
 gi|225859260|ref|YP_002740770.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 70585]
 gi|225861336|ref|YP_002742845.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|237649208|ref|ZP_04523460.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CCRI 1974]
 gi|237821817|ref|ZP_04597662.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|298230582|ref|ZP_06964263.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255877|ref|ZP_06979463.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298503238|ref|YP_003725178.1| amino acid ABC superfamily transporter permease [Streptococcus
           pneumoniae TCH8431/19A]
 gi|303254159|ref|ZP_07340272.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|303260725|ref|ZP_07346685.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303263052|ref|ZP_07348984.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264456|ref|ZP_07350376.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303267434|ref|ZP_07353288.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303269791|ref|ZP_07355540.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|307068147|ref|YP_003877113.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|307126931|ref|YP_003878962.1| amino acid ABC transporter permeae [Streptococcus pneumoniae
           670-6B]
 gi|14972991|gb|AAK75593.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|116077105|gb|ABJ54825.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|147756492|gb|EDK63533.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147758744|gb|EDK65741.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147760431|gb|EDK67409.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147764168|gb|EDK71100.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147922868|gb|EDK73984.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147925748|gb|EDK76823.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147928630|gb|EDK79644.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|147930005|gb|EDK80992.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|168995000|gb|ACA35612.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172042766|gb|EDT50812.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1873-00]
 gi|183571981|gb|EDT92509.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP195]
 gi|183573305|gb|EDT93833.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC0288-04]
 gi|183576655|gb|EDT97183.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC3059-06]
 gi|183578303|gb|EDT98831.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|194358382|gb|ACF56830.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
 gi|220674676|emb|CAR69249.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225720386|gb|ACO16240.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 70585]
 gi|225723987|gb|ACO19840.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|225726193|gb|ACO22045.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae P1031]
 gi|225727461|gb|ACO23312.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238833|gb|ADI69964.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Streptococcus pneumoniae TCH8431/19A]
 gi|301794515|emb|CBW36957.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae INV104]
 gi|301800339|emb|CBW32968.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae OXC141]
 gi|301802223|emb|CBW34973.1| putative amino acid ABC transporter permease protein [Streptococcus
           pneumoniae INV200]
 gi|302598885|gb|EFL65918.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|302635815|gb|EFL66318.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638128|gb|EFL68603.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302640684|gb|EFL71082.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302643025|gb|EFL73318.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646268|gb|EFL76495.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|306409684|gb|ADM85111.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
 gi|306483993|gb|ADM90862.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae 670-6B]
 gi|327389686|gb|EGE88031.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
 gi|332072294|gb|EGI82777.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332073837|gb|EGI84315.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
 gi|332074251|gb|EGI84728.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 213

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+  + T+   A + +FS  LG++++       +  H        L+ I  +++ G P L
Sbjct: 12  LNGASTTVQVFALVLLFSIPLGVLIAFALQVHWKPLHY-------LINIYIWVMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +PRG
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPRG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFSPFDRVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 174 AANRDASLVPMFL-AGAIYLILIGIVTIISKKVEKKYSYYR 213



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +  +G L+        K + ++  +Y+ V R  P L+ + F+
Sbjct: 11  LLNGASTTVQVFALVLLFSIPLGVLIAFALQVHWKPLHYLINIYIWVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S+    D          LN 
Sbjct: 71  YYVLPSIGIRLDRLPAAIIAFVLNY 95


>gi|309806886|ref|ZP_07700873.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 03V1-b]
 gi|308166752|gb|EFO68944.1| putative glutamine ABC transporter, permease protein GlnP
           [Lactobacillus iners LactinV 03V1-b]
          Length = 244

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 15/225 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    +   L F    +     I + S +L  +L LF          +  K   + +I  
Sbjct: 4   FIHAYSWINLRFLLQGLMVTVYISIVSIILSFILGLFLGI------VRYLKIKVISHIVG 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++  L  L L+ + +  +F  P L          V+    +  IAL  +  A +AEIVR
Sbjct: 58  FIVDILRNLPLLLIIFFAYFGLPQL--------GIVTNVTCAAIIALVVFEGAMLAEIVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ AV +GQ+E A++ G+T+ +A   V++PQA+  +IP + SQ+++L+K++SLA  +  
Sbjct: 110 SGIGAVNKGQLEGALSNGMTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVL 169

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +L+     I +Q T   + + +I   +Y  +   ++L  + L  
Sbjct: 170 PELLYHAQIIYSQNTTYLLPMYVIVALMYFIICFTLSLIADHLQK 214



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 38/76 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G + T +++   +I + I+G  +G  R    K+++ I    V++ RN+P 
Sbjct: 9   SWINLRFLLQGLMVTVYISIVSIILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           L++IFF Y  +  +  
Sbjct: 69  LLIIFFAYFGLPQLGI 84


>gi|240850318|ref|YP_002971711.1| amino acid ABC transporter, permease protein [Bartonella grahamii
           as4aup]
 gi|240267441|gb|ACS51029.1| amino acid ABC transporter, permease protein [Bartonella grahamii
           as4aup]
          Length = 240

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 1/189 (0%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + K  KA+  L+ + F       L L  + Y L      +  +           F++ 
Sbjct: 49  RSNIKMAKAMARLFSTVFRGL-PELLTLFLVYYGLQSLIQNVFDYFNFEIMFSINAFVAG 107

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS   AAF  E+         +GQ EAA ALGL+       ++ PQ +R+ +P L++
Sbjct: 108 VLALSMVLAAFSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRIVFPQLIRNALPGLSN 167

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +L LLK++SL   +   DL+      +  T + +   L+   +YL  S +    +  L 
Sbjct: 168 NWLTLLKDTSLVSTIALVDLMRQTNLAVAATNKPMLFYLVACLLYLLFSAVFTAILRHLE 227

Query: 390 AKIALKEKK 398
               + +KK
Sbjct: 228 TYTQIGDKK 236


>gi|300725184|ref|YP_003714512.1| putative high-affinity glutamine ABC transporter membrane protein
           [Xenorhabdus nematophila ATCC 19061]
 gi|297631729|emb|CBJ92448.1| putative high-affinity glutamine transport protein (ABC
           superfamily, membrane) [Xenorhabdus nematophila ATCC
           19061]
          Length = 247

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 105/212 (49%), Gaps = 13/212 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLY-----ISTFLIFGLPTLVLIALKYQLHFD 247
              L + +S+ A  +S       G AL +L      +   ++     + +I L +  +F 
Sbjct: 25  GAALTLAISIMAGGISIVLGIMAGVALAMLRGFWVNLLAAVLGFFRAIPVIMLIFWTYFL 84

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PV+            PE  ++  AL+  T+A++A  V++G++A+  GQ  A ++LG   
Sbjct: 85  LPVVLGMEI-------PEITTVVCALALITSAYLAHGVKAGILAISEGQWRAGLSLGFNR 137

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEI 366
            +    ++LPQA+R ++P   +Q++ L+K++SLA  VG  +L  +   + N++    +E+
Sbjct: 138 WEVLWYIILPQALRMMVPSFINQWIALIKDTSLAYIVGVGELSFLATQVNNRSMVYPMEV 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    IY  + + + L  N +  + ++K +K
Sbjct: 198 FLFVALIYFVMCLSLELIANYVARRFSVKREK 229


>gi|296159438|ref|ZP_06842263.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295890422|gb|EFG70215.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 237

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 86/218 (39%), Gaps = 4/218 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + V S  +G   ++    ++R   ++       LY  T++  G P
Sbjct: 14  YWDGQRMSGLAVTLWLLVASVGIGFCAAIPL-AVARVSKKRWLSTPVRLY--TYVFRGTP 70

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V + L Y   +    +     +  +     F    +A +  T A+  EI    + +  
Sbjct: 71  LYVQLLLIYTGMYSLEFVRSQQLLD-AFFRSGFHCAILAFALNTCAYTTEIFAGAIRSTS 129

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            G++EAA A G++     R +++P A+R  +P  +++ + +L  +++A      D++ V 
Sbjct: 130 HGEVEAARAYGMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTATVPDILKVA 189

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + T Q+ +   +   IYL +S  +     R    
Sbjct: 190 RDANSATYQSFDAFGLAALIYLVVSFALVALFRRAERH 227



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +         +   R+S  + ++   R+Y  VFR  P  V +  +Y
Sbjct: 20  MSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHS 162
             + S+  +    
Sbjct: 80  TGMYSLEFVRSQQ 92


>gi|123966464|ref|YP_001011545.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200830|gb|ABM72438.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9515]
          Length = 297

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 128/263 (48%), Gaps = 16/263 (6%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
             +K    + P              ++       +    + K+ + S +L   L      
Sbjct: 37  IGFKFDWLIKPASFSLAEHSLPYSPSDNYAWAIFIGWMNSLKVIISSLILATCLGTLIGF 96

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG-------- 258
           L R       +     YI+  +I   P L+ +   Y + F       F  +         
Sbjct: 97  L-RVGKNSFFRIFTAGYIT--VIRQTPLLIQLMCWYFVGFLSIRNNSFLNVRNIVNISNR 153

Query: 259 -----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                G   S EF +L   LS +++AFIAE++R G+ +VP GQ EA  +LG++ ++    
Sbjct: 154 GIELFGLNFSSEFSALLFGLSIFSSAFIAEVIRGGIQSVPLGQWEAFRSLGISEKQGFIK 213

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQA+ + IP LTSQYLNL KNS+LA+AVG++D+ ++  TIINQTG+A+E  +I +F 
Sbjct: 214 IIIPQALPAFIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRALECFIILLFS 273

Query: 374 YLSLSIMIALFMNRLNAKIALKE 396
           +L L+++I   M  ++  I  K 
Sbjct: 274 FLILNLLITKVMEIIDKSIMKKR 296



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 77/181 (42%), Gaps = 1/181 (0%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            +   I +Q +L   +       +NN+  N++++++     +L + A F + +  +PY+ 
Sbjct: 2   SKNKKIVLQFVLMFAVLGFLGILINNLMINLKRTDIGFKFDWLIKPASFSLAEHSLPYSP 61

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA AI +G++N+  +  S +I AT +GTL+G  R+  N         Y+ V R  P 
Sbjct: 62  SDNYAWAIFIGWMNSLKVIISSLILATCLGTLIGFLRVGKNSFFRIFTAGYITVIRQTPL 121

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN-RGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           L+ +   Y      +       V       N    L     + + +A +F  S      +
Sbjct: 122 LIQLMCWYFVGFLSIRNNSFLNVRNIVNISNRGIELFGLNFSSEFSALLFGLSIFSSAFI 181

Query: 201 S 201
           +
Sbjct: 182 A 182


>gi|330982420|gb|EGH80523.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 219

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS + G+   +  +   R            L I   L   +P LV + L +   F
Sbjct: 28  LLAIVFSSLGGLCYGVLRSLGKRWLEVP-------LQIYLELFRAIPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL 
Sbjct: 78  GLPIFLGLSI-------PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLG 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  VG  II +T +++ I
Sbjct: 131 LGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   ++     L  +
Sbjct: 191 YGFLFLFFFIVCYPLSAASRVLERR 215



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ +++ G   G  R    + +    ++Y+E+FR IP LV ++  
Sbjct: 16  LITGAGRTLGISLLAIVFSSLGGLCYGVLRSLGKRWLEVPLQIYLELFRAIPVLVWLYLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|270264105|ref|ZP_06192372.1| transporter [Serratia odorifera 4Rx13]
 gi|270041754|gb|EFA14851.1| transporter [Serratia odorifera 4Rx13]
          Length = 237

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 14/225 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                  LT+  +A   + + +LG++L+       R    +  + L + Y S F     P
Sbjct: 14  WLWDGFLLTLWLSACASLAATLLGLILTAM-----RDSSLRPLRWLAVGYSSLF--RNTP 66

Query: 234 TLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIAEIVR 286
            LV +   Y      L          +   G    P  EF++ +  L+ Y+ AFIAE +R
Sbjct: 67  LLVQLFFWYFAAGQILPSSAMQWLNTSHQIGPIAWPSFEFLAGFFGLTLYSTAFIAEEIR 126

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+  V  GQ  AA ALGLT  +A R V+LPQA++   PPL  QY+N++KNSSL +A+G 
Sbjct: 127 SGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAFPPLLGQYMNVIKNSSLTMAIGV 186

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A+L      +  +T +  +   +   +Y+++  ++  +      +
Sbjct: 187 AELSYASRQVETETLRTFQAFGVATVLYIAIIALLEGWGMWRQQR 231



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 52/119 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     Y   +  GF+ T WL+    + AT++G ++ A R S+ + + W+   Y  +F
Sbjct: 3   LDWLLAPQYLGWLWDGFLLTLWLSACASLAATLLGLILTAMRDSSLRPLRWLAVGYSSLF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           RN P LV +FF Y +   +LP      +            SF  L       ++  +F+
Sbjct: 63  RNTPLLVQLFFWYFAAGQILPSSAMQWLNTSHQIGPIAWPSFEFLAGFFGLTLYSTAFI 121


>gi|27381509|ref|NP_773038.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27354677|dbj|BAC51663.1| blr6399 [Bradyrhizobium japonicum USDA 110]
          Length = 222

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 14/229 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                     +   S +LG  + L  T L+R    +    L + 
Sbjct: 1   MTYHFDFSSLLPYWRDLLFGCGLTLAMTSISVLLGFTIGLL-TVLARRSSLRALNVLAIG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   +I   P LV +   Y           F           + +  IALS    AF A
Sbjct: 60  YIE--IIRNTPFLVQVLFIY-----------FGLPALGLSLAAWPAGVIALSLNAGAFAA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R G+  +PRGQ EA  ALGL   +  R ++   A+R+I P L SQ++ LL  SS+  
Sbjct: 107 EIIRGGIDGIPRGQFEAGAALGLHPFQVLRFIVFKPALRAIYPALASQFVLLLLTSSIVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A+   +L +   ++   T ++ EI ++   +YL ++++ +     +   
Sbjct: 167 AISAEELTAAAQSVDTLTFRSFEIYIVATLLYLLMALVFSQAFKAIERH 215



 Score = 44.2 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 39/95 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S   Y   +L G   T  +    ++    IG L    R S+ + +  +   Y+E+ R
Sbjct: 6   DFSSLLPYWRDLLFGCGLTLAMTSISVLLGFTIGLLTVLARRSSLRALNVLAIGYIEIIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P LV + F+Y  + ++             + LN
Sbjct: 66  NTPFLVQVLFIYFGLPALGLSLAAWPAGVIALSLN 100


>gi|322376869|ref|ZP_08051362.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282676|gb|EFX59683.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 213

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 100/221 (45%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS  ++T+   A + +FS  LG++++       +  H        L+ I  +++ G P L
Sbjct: 12  LSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKPLHY-------LINIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +P+G
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFSPFATVRYIILPQVTKVVLPSVFNEVMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 174 AANRDASLVPMFL-AGAIYLILIGIVTILAKKVEKKYSYYR 213



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G L+        K + ++  +Y+ + R  P L+ + F+
Sbjct: 11  LLSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKPLHYLINIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S+    D          LN 
Sbjct: 71  YYVLPSIGIRLDRLPAAIIAFVLNY 95


>gi|307130766|ref|YP_003882782.1| arginine ABC transporter membrane protein [Dickeya dadantii 3937]
 gi|306528295|gb|ADM98225.1| arginine transporter subunit; membrane component of ABC superfamily
           [Dickeya dadantii 3937]
          Length = 223

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
                +   YI+ F   G P LV I L Y        + Q +++      P ++    AL
Sbjct: 42  PIASQIAKGYITLFT--GTPLLVQIFLIYYGPGQFAAIRQIDWLWNLLSQP-WLCAVSAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG+  R+    +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPDGQWQSCAALGMNQRQTL-RILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K +SLA  +   +++  G  +  +T   + +      +YL ++ ++ L M  +  +  
Sbjct: 158 VFKGTSLAYTITLMEVMGYGQLLYGRTYDVL-VFGAAGIVYLCVNGLLTLLMRLVERRAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 RFEQR 221


>gi|229593010|ref|YP_002875129.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229364876|emb|CAY52940.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 236

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 4/180 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +    +Y+  F   G P LV + + Y          Q   +        ++   +A 
Sbjct: 57  RWVRGFTGVYVYFF--RGSPLLVQLFMLYYGLGSFKGFWQEVGLWW-FFRDAWLCTLLAF 113

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  TAA+ AEI+R  L A+  GQ EA+  LGL+     R V+LPQ++   I PL ++ + 
Sbjct: 114 TLNTAAYQAEIMRGALTAIAPGQREASQTLGLSRWTTLRKVILPQSLLVAIGPLGNELVL 173

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++K SS+A  V   DL+ V     ++T    +I L    +YL +  ++   + RL   ++
Sbjct: 174 MIKASSIASLVTIYDLMGVTKLAFSRTFD-FQIYLWAAVLYLVIVEVVRRALKRLERSLS 232


>gi|218659451|ref|ZP_03515381.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli IE4771]
          Length = 128

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 68/126 (53%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+ + ++ + EIVR  L A+P+GQ EAA A+GLT  +    VL PQAMR  +P   
Sbjct: 1   GVLALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCLPAWV 60

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +    ++K S+L   +G A+L+     II++   +++   +   +Y  ++  I  F   +
Sbjct: 61  NTAAEMVKASTLLSVIGVAELLLRTQEIISRNFMSLQFYFLAGGLYFIVNYGIEHFGKYV 120

Query: 389 NAKIAL 394
             K AL
Sbjct: 121 ERKTAL 126


>gi|170742607|ref|YP_001771262.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196881|gb|ACA18828.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 238

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 1/169 (0%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F+  G P LV + L Y          Q   +      P + +L+ ALS  T A+ AEI
Sbjct: 57  YVFVFRGTPLLVQLFLIYYGLGQFRQDLQALNLWWFFREPYWCALF-ALSLNTGAYTAEI 115

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR G++AVP G + A  A G++       V LP A R  +P   ++ + ++K+++LA  +
Sbjct: 116 VRGGVLAVPHGALLAGRACGMSRLTLLSRVTLPLAARQALPAYGNEVILVVKSTALASTI 175

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++  +   +I Q+ +A+EI       YL+    I   +    A++A
Sbjct: 176 TIMEVTGIAQKLIAQSFRALEIFCCAAAFYLAAVSAIIALVRLAEARLA 224


>gi|33599319|ref|NP_886879.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33575365|emb|CAE30828.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 252

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 7/190 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE- 265
           ++R       K L  +Y+  F    +P +V + L Y   F  P L            PE 
Sbjct: 52  VARTLPYPLVKRLAAVYVEVF--RNIPLIVQMFLWY---FVLPELLPKALGDWIKQLPEG 106

Query: 266 -FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  +++  Y +A I E +R+G+ A+P GQ +A +ALGLT  +  R VLLP A+R ++
Sbjct: 107 SFYTAALSIGVYMSARIGEQLRAGIEALPPGQRQAGLALGLTLPQLYRHVLLPNALRMVL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P +TS  LN +KN+S+A+ +G ADL +    +   + Q  E  L     YL+L++++ + 
Sbjct: 167 PTMTSDCLNTIKNTSVALTIGLADLTAQAHAMQEYSFQVFEAFLTATVAYLALNLIVIVA 226

Query: 385 MNRLNAKIAL 394
           M  L   +++
Sbjct: 227 MRALERWVSI 236



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 36/85 (42%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               +Y   +L G   T   A      A  +G  VG  R     LV  +  VYVEVFRNI
Sbjct: 16  DGGQTYLQTLLDGLAVTVQTAALAWALALGLGIAVGVARTLPYPLVKRLAAVYVEVFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIV 164
           P +V +F  Y  +  +LP      +
Sbjct: 76  PLIVQMFLWYFVLPELLPKALGDWI 100


>gi|295096602|emb|CBK85692.1| L-glutamate ABC transporter membrane protein/L-aspartate ABC
           transporter membrane protein [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 246

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSI 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVIPELLPEDLGMWFKAELDPNVQF-----------FVS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMNLV 233

Query: 389 NAKIAL 394
             K+ L
Sbjct: 234 ERKVRL 239



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 17/182 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            R   N+ ++ I  +YVE+FRN+P +V  F  Y  +  +LP       L           
Sbjct: 53  LRTVPNRFLSSIGTLYVELFRNVPLIVQFFTWYLVIPELLPE-----DLGMWFKAELDPN 107

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               ++      +F  + V   V +      R  ++     G  LP  Y    L      
Sbjct: 108 VQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRV 167

Query: 235 LV 236
           +V
Sbjct: 168 IV 169


>gi|306818522|ref|ZP_07452245.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus mulieris ATCC 35239]
 gi|307701066|ref|ZP_07638091.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
 gi|304648695|gb|EFM45997.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus mulieris ATCC 35239]
 gi|307614061|gb|EFN93305.1| ABC transporter, permease protein [Mobiluncus mulieris FB024-16]
          Length = 217

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 5/183 (2%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +  +     PL ++  F I  +    L+     ++F    L    F    +    F ++ 
Sbjct: 36  YGGRVCPFKPLAWVVQFYISIMRGTPLMLQLMVVYFGPYYL----FGVQISAEYRFYAVI 91

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G  A+P GQ EAA  LG + R+    + +PQ  R+++P +T++
Sbjct: 92  IAFAINYAAYFAEIYRGGFQAIPAGQSEAAFVLGYSQRRTFFTIKVPQMFRTVLPSITNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SLA A+ + ++ ++     + T  ++   +     Y   +I++A+ M+RL  
Sbjct: 152 VITLVKDTSLAFAISYTEMFTLAKQYASSTA-SMAPFVAAAVFYYVFNIVVAVLMDRLEK 210

Query: 391 KIA 393
            ++
Sbjct: 211 HVS 213


>gi|83721356|ref|YP_441444.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|167583162|ref|ZP_02376036.1| histidine transport system permease protein [Burkholderia
           thailandensis TXDOH]
 gi|167618322|ref|ZP_02386953.1| histidine transport system permease protein [Burkholderia
           thailandensis Bt4]
 gi|83655181|gb|ABC39244.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 237

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 89/228 (39%), Gaps = 2/228 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLY 223
           +   +    R   +      T   I ++  V+ I +    +           K L   ++
Sbjct: 1   MIELIQEYWRNYLYTDGYRFTGLAITLWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVW 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T++  G P  V + L Y   +    +     +  +          +A +  T A+  E
Sbjct: 61  LYTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPML-DAFFRDGMNCTLLAFTLNTCAYTTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    + +   G++EAA A G++     R ++LP A+R  +P  +++ + +L  +++A  
Sbjct: 120 IFAGAIKSTSYGEIEAARAYGMSTFTLYRRIVLPSALRRALPLYSNEVILMLHATTVAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               D++ +   + + T  +     I   +YL++S  +     R   +
Sbjct: 180 ATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERR 227



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 38/124 (30%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A    +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGLAITLWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     N  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|66046174|ref|YP_236015.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256881|gb|AAY37977.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 219

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 17/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS + G+   +  +   R            L I   L   +P LV + L +   F
Sbjct: 28  LLAIVFSSIGGVGYGVLRSLGKRWLEVP-------LRIYLELFRAIPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P       I      P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL 
Sbjct: 78  GLP-------IFLGVSIPAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLG 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  VG  II +T +++ I
Sbjct: 131 LGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVVDVTKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   ++     L  +
Sbjct: 191 YGFLFLFFFIVCYPLSAASRVLERR 215



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ ++I G   G  R    + +    R+Y+E+FR IP LV ++  
Sbjct: 16  LITGAGRTLGISLLAIVFSSIGGVGYGVLRSLGKRWLEVPLRIYLELFRAIPVLVWLYLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|78067202|ref|YP_369971.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           sp. 383]
 gi|77967947|gb|ABB09327.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia sp. 383]
          Length = 237

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R   +K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSIPL-AVARVSKKKWLSGAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +     +  +          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQAVRGTPML-DAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 TFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     +   +
Sbjct: 203 FGIAALLYLVISFTLVWLFRQAERR 227



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y    + G   T WL    +     +   +   R+S  K ++    +
Sbjct: 5   IQEYWRNYLYTDGYR---ITGVAITLWLLVVSIGLGFCLSIPLAVARVSKKKWLSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|315653364|ref|ZP_07906286.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|315489289|gb|EFU78929.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
          Length = 219

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 15/230 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F    +   L F    +     I + S +L  +L LF          +  K   + +I  
Sbjct: 4   FIHAYSWINLRFLLQGLMVTVYISIVSIILSFILGLFLGI------VRYLKIKVISHIVG 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F++  L  L L+ + +  +F  P L          V+    +  IAL  +  A +AEIVR
Sbjct: 58  FIVDILRNLPLLLIIFFAYFGLPQL--------GIVTNVTCAAIIALVVFEGAMLAEIVR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ AV +GQ+E A++ G+T+ +A   V++PQA+  +IP + SQ+++L+K++SLA  +  
Sbjct: 110 SGIGAVNKGQLEGALSNGMTYAQAMYHVVVPQALHFMIPAILSQFVSLIKDTSLATIIVL 169

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L+     I +Q T   + +  I   +Y  +   ++L  + L  + + K
Sbjct: 170 PELLYHAQIIYSQNTTYLLPMYAIVALMYFIICFTLSLIADHLQKQYSAK 219



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 38/76 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G + T +++   +I + I+G  +G  R    K+++ I    V++ RN+P 
Sbjct: 9   SWINLRFLLQGLMVTVYISIVSIILSFILGLFLGIVRYLKIKVISHIVGFIVDILRNLPL 68

Query: 142 LVVIFFLYKSVLSVLP 157
           L++IFF Y  +  +  
Sbjct: 69  LLIIFFAYFGLPQLGI 84


>gi|55378504|ref|YP_136354.1| glutamine ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
 gi|55231229|gb|AAV46648.1| glutamine ABC transporter permease protein [Haloarcula marismortui
           ATCC 43049]
          Length = 226

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 19/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S +LG +L   A  +  +      +A+    +   ++ G P LV+I L    
Sbjct: 26  VTVALTATSILLGFLLGFPAGAVEVYGRGPLKRAVETAGV---VLRGTPLLVIIILL--- 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F G S  S  F++  IAL   +AA+ ++I R  L +V  GQ+EAA A+G
Sbjct: 80  -----------FFGLSVSSSAFVTATIALGLRSAAYQSQIFRGALQSVDEGQLEAARAVG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQ 362
           +   +A R V++PQA+R  +P   +++  +LK++S+A+ +G  +L+++G  +    Q+  
Sbjct: 129 MGRLQAIRSVVVPQALRRSVPGFQNEFTIVLKDTSIAIVIGLGELLTIGQNLYQGGQSTA 188

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+EI L    IY  L+ +    ++ ++   ++
Sbjct: 189 ALEIFLTVSLIYFVLTFVTNRSLDYVDDHFSI 220


>gi|21224120|ref|NP_629899.1| glutamate permease [Streptomyces coelicolor A3(2)]
 gi|2687339|emb|CAA15880.1| glutamate permease [Streptomyces coelicolor A3(2)]
          Length = 299

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 112/242 (46%), Gaps = 17/242 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                +        +         T+   A   V +  LG VL +   RLS H   +   
Sbjct: 47  WAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIA--RLSDHAWVRIPV 104

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A+ + +        +P LVL+     L  +        +   S+      ++   L  Y 
Sbjct: 105 AIVVEF-----FRSIPVLVLMIFGLALFAE--------YTDVSSDDRPLYAVVTGLVLYN 151

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A+ +AEIVR+G++A+P+GQ E A+A+GL   ++ RL+LLPQA+ +++P + SQ + +LK+
Sbjct: 152 ASVLAEIVRAGILALPKGQAEGAMAIGLRKGQSMRLILLPQAVTTMLPAIVSQLVVILKD 211

Query: 338 SSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++L    + F +L++   T+    G   I    +   IY++L+  +  F + L  ++   
Sbjct: 212 TALGGAVLTFPELLASANTMSGYYGANVIASFTVVAVIYIALNFSLTTFASWLERRLRRA 271

Query: 396 EK 397
           +K
Sbjct: 272 KK 273



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 44/91 (48%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L E+   E  +  + +TSD  ++T I  G  NT   A   M+ A  +G ++G  RLS + 
Sbjct: 39  LDEKGQLEWAKWQMFFTSDEPWSTYIWPGLQNTLKAAALSMVIALPLGAVLGIARLSDHA 98

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLS 154
            V     + VE FR+IP LV++ F       
Sbjct: 99  WVRIPVAIVVEFFRSIPVLVLMIFGLALFAE 129


>gi|318060996|ref|ZP_07979717.1| glutamate transporter permease [Streptomyces sp. SA3_actG]
          Length = 300

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 107/242 (44%), Gaps = 17/242 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                             L     T+   A   V +  LG V  +   RLS H   +   
Sbjct: 47  WIKWKPFFTDSQAWTTYLLPGLGQTLLAAAISMVIALPLGAVFGIA--RLSDHVWVRVPS 104

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A  + +        +P L+++ + Y ++          +   ST      ++   L  Y 
Sbjct: 105 ATVVEF-----FRSIPVLIMMIVAYAVYAQ--------YTSVSTDDRPLYAVVTGLVLYN 151

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A+ +AEIVR+G++++P+GQ EAA A+GL   +  R +LLPQ++ +++P + SQ + ++K+
Sbjct: 152 ASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQTMRSILLPQSVTAMLPAIVSQLVVIVKD 211

Query: 338 SSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++    +GF++L++    +    G   I    I   IY+ ++  +      L  ++   
Sbjct: 212 TAIGGSILGFSELINAVRPLSAAYGANTIACFTIVAVIYIIVNFTLTSLATWLEKRLRAG 271

Query: 396 EK 397
           +K
Sbjct: 272 KK 273



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 36/88 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T   ++ T +L G   T   A   M+ A  +G + G  RLS +  V       VE FR+
Sbjct: 54  FTDSQAWTTYLLPGLGQTLLAAAISMVIALPLGAVFGIARLSDHVWVRVPSATVVEFFRS 113

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           IP L+++   Y        +      L 
Sbjct: 114 IPVLIMMIVAYAVYAQYTSVSTDDRPLY 141


>gi|296533472|ref|ZP_06896051.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296266198|gb|EFH12244.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 223

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 15/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                        +   +  LG+V  +    LS     ++ + L   +   F       L
Sbjct: 18  WPILWQGFLYTLGLSAMTVPLGLVGGVMLALLS-TAGPRSIRWLAAGWTDLFRAIPPLVL 76

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ L   L F                   + ++ I     T A+  E++R+G+ +VPRG
Sbjct: 77  -LVFLYAGLPF------------AGLDVGAWGAVAIGFFLNTGAYYGEVLRAGIESVPRG 123

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA + GL   +A   V+LPQA+R+++P L S  L ++K +S+A  V   +L+     
Sbjct: 124 QMEAARSTGLNRAQALAHVVLPQAVRNVLPDLVSNTLEVVKLTSIASVVALPELLFQARQ 183

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             N T  A  I +     Y  L   +   ++RL  K
Sbjct: 184 AQNATYNATPI-VAAAVAYFLLLWPLVRLISRLENK 218



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 38/92 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  GF+ T  L+   +    + G ++     +  + + W+   + ++FR IPPLV++
Sbjct: 18  WPILWQGFLYTLGLSAMTVPLGLVGGVMLALLSTAGPRSIRWLAAGWTDLFRAIPPLVLL 77

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            FLY  +            +  G FLN     
Sbjct: 78  VFLYAGLPFAGLDVGAWGAVAIGFFLNTGAYY 109


>gi|171059368|ref|YP_001791717.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|171060693|ref|YP_001793042.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170776813|gb|ACB34952.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
 gi|170778138|gb|ACB36277.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 247

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 10/219 (4%)

Query: 178 FPTLTMDTNAKIFVFSF-VLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTL 235
              L    +A  +  S  VL ++++L    L   F     +AL  L    T L   +P L
Sbjct: 29  ITYLDWLLSAWGWTLSVAVLALIVALAVGSLMGIFRTTPSRALVALGNSWTELFRNIPLL 88

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I L Y                     P F+ + + L  +T+A ++E V++G+  +P+G
Sbjct: 89  VQIFLWY--------HVLPQIFPSLQAIPSFILVVVGLGFFTSARVSEQVKAGIQTLPKG 140

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  A +A+GLT  +  R VLLP A R +IPPLTS+ +N++KNSS+A AV   +L      
Sbjct: 141 QRYAGLAMGLTLPQTYRYVLLPMAFRIVIPPLTSESMNIIKNSSVAFAVSVTELTMFAMQ 200

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +T + +EI L    +Y   +  I      +  ++ +
Sbjct: 201 AQEETSRGVEIYLAVTALYFISAFFINRVALFIEHRVQV 239



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 39/82 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L  +  T  +A   +I A  +G+L+G  R + ++ +  +   + E+FRNIP LV
Sbjct: 30  TYLDWLLSAWGWTLSVAVLALIVALAVGSLMGIFRTTPSRALVALGNSWTELFRNIPLLV 89

Query: 144 VIFFLYKSVLSVLPIPDHSIVL 165
            IF  Y  +  + P        
Sbjct: 90  QIFLWYHVLPQIFPSLQAIPSF 111


>gi|87309629|ref|ZP_01091763.1| amino acid ABC transporter, permease protein [Blastopirellula
           marina DSM 3645]
 gi|87287393|gb|EAQ79293.1| amino acid ABC transporter, permease protein [Blastopirellula
           marina DSM 3645]
          Length = 219

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 17/231 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F + +    L    +T+   A     + +LG+  ++            T      
Sbjct: 1   MWDWEFAIRILPEILEGLGVTLLAVAGGMTLAILLGLAWAVMRRSTLHWVSWPT------ 54

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y     I   P LV + L Y    +            S       S    L  + + + 
Sbjct: 55  -YGIVEFIRSTPLLVQLYLVYYTLAEL----------TSGWLSPLWSGIFVLGLHYSCYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+GL  VP+GQ  AA AL LT  +  R V+LPQA+  I+P L +  + + K++ L 
Sbjct: 104 AEVYRAGLNGVPQGQWIAAKALNLTTWQTYRHVVLPQAIPPILPALGNYLIAMFKDAPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            A+   D++     + NQ+ +  E + I   I+L+LSI+  + ++ L  ++
Sbjct: 164 SAITVLDVLQRAKIVGNQSFRYQEPLTIVGIIFLTLSILSGVGVSWLKRRV 214



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T      GM  A ++G      R S    V+W     VE  R+ P LV ++ +
Sbjct: 14  ILEGLGVTLLAVAGGMTLAILLGLAWAVMRRSTLHWVSWPTYGIVEFIRSTPLLVQLYLV 73

Query: 149 YKSVLSV---LPIPDHSIVLPFGMFLN 172
           Y ++  +      P  S +   G+  +
Sbjct: 74  YYTLAELTSGWLSPLWSGIFVLGLHYS 100


>gi|212716829|ref|ZP_03324957.1| hypothetical protein BIFCAT_01772 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660114|gb|EEB20689.1| hypothetical protein BIFCAT_01772 [Bifidobacterium catenulatum DSM
           16992]
          Length = 218

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 14/232 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F          F          I VF  VL I + L              K +  +YI 
Sbjct: 1   MFDWTFVTHYAPFFVNGSVMTLFISVFGIVLSIAVGLI-CAGIEIARIPVLKHIVRVYIE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L    P LV +   Y L+F  P L          V        + L     +++AE +
Sbjct: 60  --LSRNTPLLVQL---YFLYFGLPKL--------GIVWSAEQCAIVGLGFLGGSYMAEAM 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL  +P  Q E+A  LGL+  +    V++PQA+ + IP + +  + L+K SS+  A+ 
Sbjct: 107 RGGLETIPNVQRESAYVLGLSQWQTLSRVVIPQAISTSIPGVVANVIFLIKESSVVSAIA 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            AD++ +   +I       E +L+ +  YL + + I+LF   L  +   + +
Sbjct: 167 LADVMYMAKDLIGMYYSTYESLLMLVVAYLVILLPISLFGTWLERRFDYERR 218



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 39/73 (53%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G V T +++  G++ +  +G +     ++   ++  I RVY+E+ RN P LV 
Sbjct: 10  YAPFFVNGSVMTLFISVFGIVLSIAVGLICAGIEIARIPVLKHIVRVYIELSRNTPLLVQ 69

Query: 145 IFFLYKSVLSVLP 157
           ++FLY  +  +  
Sbjct: 70  LYFLYFGLPKLGI 82


>gi|271501284|ref|YP_003334309.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344839|gb|ACZ77604.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 229

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 86/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ + S VL +++ L     ++    +        Y  T LI G+P LVL+ 
Sbjct: 10  MDGARMTLQLALCSLVLSLLIGLMGAA-AKLSSSRLLSGFFSGY--TTLIRGVPDLVLML 66

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                         +  I +     A+  E  R   +AVPRGQ+EA
Sbjct: 67  LIFYGLQMVLNSITETLGVDQIDIDPMGAGIITVGFIYGAYFTETFRGAYLAVPRGQIEA 126

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+A G T  K  R ++ P  MR  +P + + +  +LK ++L   +G +D++         
Sbjct: 127 AVAFGFTPMKVFRRIMFPSMMRFALPGIGNNWQVILKATALVSLLGLSDVIKATQLAGKG 186

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           T       ++   +YL  + +    +  L  + +   +K
Sbjct: 187 THHPFFFAIVAGVLYLVFTTLSNGVLWWLEKRYSQGVRK 225


>gi|311898730|dbj|BAJ31138.1| putative glutamate ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 275

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 22/252 (8%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V+      ++L  +           G    +         +   A   + +F LG V SL
Sbjct: 26  VLGVLGIAALLWWIVAVLADKGQFDGWLWRSFEYKNVQQRIVDGALATLKAFALGAVGSL 85

Query: 203 FATRL---SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
               L    R    +  +      +  F    +P L++I   Y   F             
Sbjct: 86  VLGVLLAVGRLSDHRPVRVACTAVVQFF--RAMPLLIMIFALYTAVFTAQ---------- 133

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                   +L + LS Y  A  AEI+RSG+ AVPRGQ EA  ALGL   +   LVLLPQ+
Sbjct: 134 -----PLWALVLGLSVYNGAVQAEIIRSGINAVPRGQGEAGYALGLRKTQVMTLVLLPQS 188

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSL 377
           +R+++P +  Q +  LK++SL   + + +L+ VG  I + +     I +IL+   +Y+++
Sbjct: 189 VRAMLPAIIGQLVVTLKDTSLGYIITYPELLFVGRWIASNSDGYPYIPVILVITPLYIAM 248

Query: 378 SIMIALFMNRLN 389
            + ++     + 
Sbjct: 249 CLALSGLARWIE 260



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 23/149 (15%)

Query: 14  SRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
                LYD      R       ++  L +  +  W V  + +  +         +L    
Sbjct: 4   RSASVLYDVPGPRARARYRLFGVLGVLGIAALLWWIVAVLADKGQFDG------WLWRSF 57

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
            ++  Q  +            + G + T      G + + ++G L+  GRLS ++ V   
Sbjct: 58  EYKNVQQRI------------VDGALATLKAFALGAVGSLVLGVLLAVGRLSDHRPVRVA 105

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           C   V+ FR +P L++IF LY +V +  P
Sbjct: 106 CTAVVQFFRAMPLLIMIFALYTAVFTAQP 134


>gi|296876762|ref|ZP_06900810.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
 gi|296432264|gb|EFH18063.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus parasanguinis ATCC
           15912]
          Length = 213

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 19/226 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L   +LT+   A + + S  LGIV++      S+  H        LL I
Sbjct: 1   MQYALEILPSLLKGASLTLQVFAFVLILSIPLGIVVAFLLQLRSKILHG-------LLTI 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y +                       +  +A +   AA+ AEI
Sbjct: 54  YIWVMRGTPLLLQLIFIYYV-----------LPSIGIRIDRLPAAIMAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P GQ EAA  L L+  +  R ++LPQ ++ ++P + ++ ++L+K++SL  A+
Sbjct: 103 FRGGIVAIPTGQYEAAKVLKLSSWQTIRYIILPQVVKIVLPSVFNEVMSLIKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G +DL+    T  N+      + L    IYL L  ++ +   R+  
Sbjct: 163 GISDLILASRTAANRDASLAPMFL-AGAIYLILIGIVTIIAKRVEK 207



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 36/102 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G +V       +K++  +  +Y+ V R  P L+ + F+
Sbjct: 11  LLKGASLTLQVFAFVLILSIPLGIVVAFLLQLRSKILHGLLTIYIWVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y  + S+    D          LN              A   
Sbjct: 71  YYVLPSIGIRIDRLPAAIMAFTLNYAAYFAEIFRGGIVAIPT 112


>gi|291616686|ref|YP_003519428.1| GltK [Pantoea ananatis LMG 20103]
 gi|291151716|gb|ADD76300.1| GltK [Pantoea ananatis LMG 20103]
 gi|327393112|dbj|BAK10534.1| glutamate/aspartate transport system permease protein GltK [Pantoea
           ananatis AJ13355]
          Length = 225

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L +    +    KI + + V GI+       + R    K       LY
Sbjct: 1   MYAFDWSSIPPSLPYLFSGLMITFKITLTAVVFGILWGTLL-AVMRLSTFKPVSWFAKLY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++ F       LV++ L + L    P   Q             +S  +A S + AA+ +E
Sbjct: 60  VNLFRSVP---LVMVLLWFYL--VVPSFLQQVLGISPKTDIRLISAMVAFSLFEAAYYSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+I++ RGQ  AA+ALG+T  ++ RLV+LPQA R+++P L +Q + L +++SL   
Sbjct: 115 IIRAGIISIARGQSSAALALGMTQWQSMRLVILPQAFRAMVPLLLTQGIVLFQDTSLVYV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  AD      TI  + G  +E+IL    +Y  +S+  +L ++ L  K
Sbjct: 175 LSLADFFRTASTIGERDGTQVEMILFAGLVYFVISLSASLLVSYLKRK 222



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 42/78 (53%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S       +  G + TF +  + ++   + GTL+   RLS  K V+W  ++YV +FR
Sbjct: 5   DWSSIPPSLPYLFSGLMITFKITLTAVVFGILWGTLLAVMRLSTFKPVSWFAKLYVNLFR 64

Query: 138 NIPPLVVIFFLYKSVLSV 155
           ++P ++V+ + Y  V S 
Sbjct: 65  SVPLVMVLLWFYLVVPSF 82


>gi|157370638|ref|YP_001478627.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322402|gb|ABV41499.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 230

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 3/210 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  + + S  + + L      L + F  +  + +   Y  T L+ G+P LV++ L +  
Sbjct: 15  LSLCVMLVSLAVALTLG-MINALIKLFGPRWLRWVSTGY--TTLVRGIPELVIMLLLFFG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G      F+S  +A+     A+  E  R   + V RGQ+EAA+A G
Sbjct: 72  GEMLVNGLLGLVGLGPLRFNTFISGVLAIGFVFGAYYTETFRGAFLTVERGQLEAAMAYG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +  R VLLPQ +   IP + + +L L+K S+L   +G  D+V +       T +  
Sbjct: 132 MRPGQVFRRVLLPQMLSFAIPGINNNWLGLMKASALVSILGLEDMVWLAEQAGRATQKPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               +   IY++++ + +   +RL  + AL
Sbjct: 192 LFYFLVALIYMAITAVSSWGFSRLARRYAL 221



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G + +  +    +  A  +G +    +L   + + W+   Y  + R IP LV+
Sbjct: 5   YLPLLAHGALLSLCVMLVSLAVALTLGMINALIKLFGPRWLRWVSTGYTTLVRGIPELVI 64

Query: 145 IFFLYKSV 152
           +  L+   
Sbjct: 65  MLLLFFGG 72


>gi|330500964|ref|YP_004377833.1| amino acid ABC transporter permease [Pseudomonas mendocina NK-01]
 gi|328915250|gb|AEB56081.1| amino acid ABC transporter, permease protein [Pseudomonas mendocina
           NK-01]
          Length = 220

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 14/232 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L            I    F + IV+ L      R  H      +  L   
Sbjct: 3   FFDWDFALSILPDLLKASLNTLLITFAGFAIAIVVGLLLAIARRSKHLWLSWPVAGLIE- 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I   P L+ +   + +           F           +  + ++ + A + AE+ 
Sbjct: 62  --FIRSTPLLIQVYFLFYV-----------FPNYGLSLTALQAGILGIALHYACYTAEVY 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL AVPRGQ EA  AL ++   A R ++LPQA+R I+P L +  + +LK++ +  A+ 
Sbjct: 109 RAGLDAVPRGQWEAVTALNMSPLSAYRQIILPQALRPILPALGNYLVAMLKDTPVLSAIT 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +++     I +++ + +E I +    +L LS+ +A  + R+  ++ +  +
Sbjct: 169 VVEIMQQAKNIGSESFRYLEPITMVGIFFLLLSLALAWCVRRMEDRLEVSAR 220



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
              +    S    +L   +NT  + F+G   A ++G L+   R S +  ++W     +E 
Sbjct: 3   FFDWDFALSILPDLLKASLNTLLITFAGFAIAIVVGLLLAIARRSKHLWLSWPVAGLIEF 62

Query: 136 FRNIPPLVVIFFLYKSVLS 154
            R+ P L+ ++FL+    +
Sbjct: 63  IRSTPLLIQVYFLFYVFPN 81


>gi|219852260|ref|YP_002466692.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanosphaerula palustris E1-9c]
 gi|219546519|gb|ACL16969.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanosphaerula palustris E1-9c]
          Length = 226

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 3/217 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL--LYISTFLIFGLPTLVL 237
             T D    I + +   G++++L     S  F   TG  + L   Y S F        VL
Sbjct: 1   MTTPDFILTILLPAIGSGLLVTLGLVACSAPFGLLTGIGVALGRTYGSPFTASVCRLFVL 60

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +     L     ++  F           F++  +       A+ +E +R  L ++  GQM
Sbjct: 61  LVKGCPLLILLFIIY-FGLPSVGIRFSAFVASVLGFILCNGAYTSEYIRGALGSIRDGQM 119

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
            AA+ALG+T R+A R V+LPQAMR  IP + ++ + L+K SSLA  +   ++   G  + 
Sbjct: 120 TAALALGMTRRQAIRYVMLPQAMRRAIPGIANEMIYLIKYSSLAYMLTCIEVTGAGKIVA 179

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +     E   +   +YL+L  +     N L  +  +
Sbjct: 180 AKYFTYTETFAVVGLVYLALVTIATWMANYLEVRYRI 216



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 36/86 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           AI  G + T  L         + G  V  GR   +   A +CR++V + +  P L+++F 
Sbjct: 14  AIGSGLLVTLGLVACSAPFGLLTGIGVALGRTYGSPFTASVCRLFVLLVKGCPLLILLFI 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +Y  + SV       +    G  L N
Sbjct: 74  IYFGLPSVGIRFSAFVASVLGFILCN 99


>gi|297194202|ref|ZP_06911600.1| amino acid ABC transporter transmembrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722543|gb|EDY66451.1| amino acid ABC transporter transmembrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 216

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 90/230 (39%), Gaps = 18/230 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                      R      +T+       + SF LG+V ++     +R             
Sbjct: 3   WDWSAIADFMPRFWDGVLITLQVLVLGSLISFTLGLVWAIAFRAPTRFIRWPV------- 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            + T  I   P LV +   Y           F             +  IA+  + + + A
Sbjct: 56  NLVTEFIRTTPLLVQLFFLY-----------FVLPEWGVQFSALTTGTIAIGLHYSTYTA 104

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++ R+G+ AVP GQ EAA AL L   +    V+LPQA+R I P L +  + +LK++ L  
Sbjct: 105 QVYRAGIEAVPPGQWEAATALSLPAHRTWIAVILPQAVRRITPALGNYVIAMLKDTPLLA 164

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A+G  +++         T Q  E + +    ++ ++   +L +  L  ++
Sbjct: 165 AIGVLEMLQQSRLESASTFQYTEPLTLIGVAFVLIAYPASLLVRSLERRL 214



 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T  +   G + +  +G +      +  + + W   +  E  R  P LV +FFL
Sbjct: 15  FWDGVLITLQVLVLGSLISFTLGLVWAIAFRAPTRFIRWPVNLVTEFIRTTPLLVQLFFL 74

Query: 149 YKSVLSVLPIPDH 161
           Y  +         
Sbjct: 75  YFVLPEWGVQFSA 87


>gi|311069228|ref|YP_003974151.1| glutamine ABC transporter permease [Bacillus atrophaeus 1942]
 gi|310869745|gb|ADP33220.1| glutamine ABC transporter (permease) [Bacillus atrophaeus 1942]
          Length = 218

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/202 (26%), Positives = 103/202 (50%), Gaps = 4/202 (1%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            + G +++L+   +S       G  +  L  +   I      V +     L     +   
Sbjct: 15  LLDGFLVTLYVAFISIVLSFMFGGVIGTLRYANIPIVSNILAVAVETIRNLPLLLIIFFT 74

Query: 254 FNFIGGSTVSPEFMSLYI-ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +  +    +  E  +  I AL+ + +A ++EI+RSGL +V +GQ EAA + GL++ +   
Sbjct: 75  YFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLKSVEKGQTEAARSSGLSYVQTLF 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILI 369
           L+++PQA+R ++PP+ SQ+++LLK++SLAV +   +L+     I  Q+        I L+
Sbjct: 135 LIIMPQALRRMVPPIVSQFISLLKDTSLAVVIALPELIHNAQIINGQSADSSYFFPIFLL 194

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
             F+Y +++  ++L   +L  K
Sbjct: 195 AAFMYFAVNYSLSLAARKLELK 216



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 9/150 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S + T +L GF+ T ++AF  ++ + + G ++G  R +   +V+ I  V VE  RN+P 
Sbjct: 8   SSDHLTFLLDGFLVTLYVAFISIVLSFMFGGVIGTLRYANIPIVSNILAVAVETIRNLPL 67

Query: 142 LVVIFFLYKSVLS---------VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           L++IFF Y ++                           +   GL          A+    
Sbjct: 68  LLIIFFTYFALPEIGIKLEITAAAITALTIFESAMLSEIIRSGLKSVEKGQTEAARSSGL 127

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           S+V  + L +    L R       + + LL
Sbjct: 128 SYVQTLFLIIMPQALRRMVPPIVSQFISLL 157


>gi|295398059|ref|ZP_06808114.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
 gi|294973708|gb|EFG49480.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aerococcus viridans ATCC 11563]
          Length = 247

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 11/214 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   I   +  +G+VL L A    R         +  +++S   I G P LV + L Y 
Sbjct: 22  PTTLAIVAVATAVGLVLGL-AIAFVRIEKVPVLSQISQVFVSF--IRGTPILVQLFLVY- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++             +   +YI     TAAF +EI RS + +V   Q EAA ++
Sbjct: 78  --YGLPIV-----FTALANIEKIDYVYITYGLNTAAFFSEIFRSAISSVATDQKEAAASV 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R ++LPQA+R  IP   +  ++LL+++SLA ++G  D++     +   T ++
Sbjct: 131 GLTKLQTYRRIILPQAVRIAIPATGTMIVSLLQDTSLAFSLGVIDVIGKVRALAALTYRS 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +E   +   I++ LSI++      L  +   + K
Sbjct: 191 LEGYFVAAIIFIVLSIVLERVFAWLTKRFQFQSK 224



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 38/108 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S+   IL     T  +         ++G  +   R+    +++ I +V+V   R  P LV
Sbjct: 12  SFFPKILSALPTTLAIVAVATAVGLVLGLAIAFVRIEKVPVLSQISQVFVSFIRGTPILV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
            +F +Y  +  V     +   + +         +     +  +A   V
Sbjct: 72  QLFLVYYGLPIVFTALANIEKIDYVYITYGLNTAAFFSEIFRSAISSV 119


>gi|312115424|ref|YP_004013020.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220553|gb|ADP71921.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 244

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EF 266
           R       + L   Y+  F    +P LV + L Y   F  P L   +        P   F
Sbjct: 55  RTLPSPLVRRLSGAYVEFF--RNIPLLVQLFLWY---FVLPELLPRDIGMWLKQVPHSNF 109

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +    L  +T++ +A  + + + ++PRGQ  AA ALGLT R++   VLLP A R + PP
Sbjct: 110 YTAAFGLGLFTSSRVAVQLAAAITSMPRGQKMAATALGLTTRQSYTNVLLPMAYRIVFPP 169

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS+ LNL+KNSS+A+ +G A+L      + + T Q  +       IYL L+I I   M 
Sbjct: 170 LTSELLNLIKNSSVALTIGVAELTQSARNMDSYTFQTFQAFTAATLIYLVLNITITAVMR 229

Query: 387 RLNAKIAL 394
           R+   +++
Sbjct: 230 RIEHGVSV 237



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +YA  +L+G   T  ++    + A ++G++VG  R   + LV  +   YVE FRNIP 
Sbjct: 19  TGTYAYTLLLGLQLTLEISVIAAVVAFVVGSIVGVCRTLPSPLVRRLSGAYVEFFRNIPL 78

Query: 142 LVVIFFLYKSVLSVLPI 158
           LV +F  Y  +  +LP 
Sbjct: 79  LVQLFLWYFVLPELLPR 95


>gi|240850317|ref|YP_002971710.1| amino acid ABC transporter, permease protein [Bartonella grahamii
           as4aup]
 gi|240267440|gb|ACS51028.1| amino acid ABC transporter, permease protein [Bartonella grahamii
           as4aup]
          Length = 235

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 98/240 (40%), Gaps = 5/240 (2%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +    +   F   L +              ++   S  LG  L +     +R       +
Sbjct: 1   MIPEWLYFLFNPDLLSHYGPKFINGFIVTVELVSISCSLGFFLGMLI-AFARLSKNTFLQ 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                Y+  F   G P L  + L Y          Q   +     +  +  L+I  +  +
Sbjct: 60  YCANAYVYFF--RGSPLLAQLFLFYYGLGSMNDFWQKVGLWWFFQNAWYCCLFI-FTLNS 116

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +EI +   ++V  GQ EA+ ALGL++      V+LPQAM   + PL ++ + ++K+
Sbjct: 117 AAYQSEIFKGSFLSVTTGQREASKALGLSNSVTFFRVILPQAMIVALRPLGNELILMIKS 176

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           S+LA  +   DL+ V     ++T    ++ +    IYL +  +I  F+  +  ++    +
Sbjct: 177 SALASLITVYDLMGVAKLTYSRTFD-FQVYVWAALIYLFIVELIHRFIVFIEQRLTRYLR 235



 Score = 43.0 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 2/103 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + GF+ T  L          +G L+   RLS N  + +    YV  FR  P L  
Sbjct: 18  YGPKFINGFIVTVELVSISCSLGFFLGMLIAFARLSKNTFLQYCANAYVYFFRGSPLLAQ 77

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +F  Y  + S+        V  +  F N         T+++ A
Sbjct: 78  LFLFYYGLGSMND--FWQKVGLWWFFQNAWYCCLFIFTLNSAA 118


>gi|270292830|ref|ZP_06199041.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270278809|gb|EFA24655.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 229

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            + +   +    LS  ++T+     + +FS  LG++++       +  H        L+ 
Sbjct: 16  SMSYLFEILPSLLSGASMTLQVFVLVLIFSIPLGVLIAFALQVHWKLLHY-------LIN 68

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  +++ G P L+ +   Y +                       +  IA     AA+ AE
Sbjct: 69  IYIWIMRGTPLLLQLIFIYYV-----------LPNIGIRLDRLPAAIIAFVLNYAAYFAE 117

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+  +P+GQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A
Sbjct: 118 IFRGGIDTIPKGQYEAAKVLKFSPFATVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYA 177

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G +DL+    T  N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 178 LGISDLILASRTAANRDASLVPMFL-AGAIYLILIGIVTILAKKVEKKYSYYR 229



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G L+        KL+ ++  +Y+ + R  P L+ + F+
Sbjct: 27  LLSGASMTLQVFVLVLIFSIPLGVLIAFALQVHWKLLHYLINIYIWIMRGTPLLLQLIFI 86

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + ++    D          LN 
Sbjct: 87  YYVLPNIGIRLDRLPAAIIAFVLNY 111


>gi|190895403|ref|YP_001985695.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190699348|gb|ACE93432.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 234

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +F  S   G +L+L    + R    +        YI  F+  G P L+ + L + 
Sbjct: 18  PTTLILFSLSIFFGGLLALVIVTM-RVSGNRYLSGFAKGYI--FVFRGSPLLIQMFLVFY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EA
Sbjct: 75  ------GLGQFGVIRYSFIWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEA 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++     R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+Q
Sbjct: 129 ARSIGMSGFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQ 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T + +E+ L    IYL L+ +I   M  L   ++   +
Sbjct: 189 TYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRR 226


>gi|104781753|ref|YP_608251.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95110740|emb|CAK15453.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 236

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 4/184 (2%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +  + L   Y+  F   G P L  + L Y          Q   +        +    
Sbjct: 54  SRSRVLQRLAAGYVYFF--RGSPLLAQLFLLYYGLGSLKGFWQDVGLWW-FFREAWYCAL 110

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A +  TAA+ AEI R+ L+AV  GQ EAA AL L        V+LPQ++   I PL ++
Sbjct: 111 LAFTLNTAAYQAEIFRASLMAVAPGQYEAARALNLKRSTTFFKVVLPQSLLVAIGPLGNE 170

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++K S++A  V   DL+ V     +++    +I L    +YL +  ++   +  L A
Sbjct: 171 LIMMIKASAIASLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLLIVELVRRTLKHLEA 229

Query: 391 KIAL 394
           ++  
Sbjct: 230 RLGR 233



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 1/114 (0%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y    + G + T  L         ++G L+   RLS ++++  +   YV  FR  P L
Sbjct: 17  ERYGPRFIDGLLVTAKLVAISFTLGALLGMLLALARLSRSRVLQRLAAGYVYFFRGSPLL 76

Query: 143 VVIFFLYKSVLSV-LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             +F LY  + S+     D  +   F        L+F   T    A+IF  S +
Sbjct: 77  AQLFLLYYGLGSLKGFWQDVGLWWFFREAWYCALLAFTLNTAAYQAEIFRASLM 130


>gi|330719149|ref|ZP_08313749.1| L-cystine permease [Leuconostoc fallax KCTC 3537]
          Length = 248

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 7/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F   L  + L      +     + + S ++G+++        R       K + ++
Sbjct: 1   MNNLFQPQLIWQYLPDILSALPVTLLLTIVSTLIGVIVG-AGIAFVRMEDTPFFKQVAIV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           + S   I G P L+ + L Y   +  P L  +  +    V+P  + L+I      AAF++
Sbjct: 60  FTSF--IRGTPILIQMFLVY---YGLPFLLNYIGVNTDNVNP-LIYLFITYGLNMAAFLS 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+ L +VP  Q EAA+  G T R+    ++ PQAM   IP   +  ++LL+++SLA 
Sbjct: 114 EIIRAALESVPATQREAALTSGYTKRQMYMKIIFPQAMVIAIPSFATMVISLLQDTSLAF 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  D+V     +   T   +E  +  M I++ LS ++    + L  +     ++
Sbjct: 174 TIGVLDVVGKAKALGTATFHTVEAYISAMIIFIILSFILERVFHWLEKRSNYSSRQ 229



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 24/71 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL     T  L     +   I+G  +   R+        +  V+    R  P L
Sbjct: 11  WQYLPDILSALPVTLLLTIVSTLIGVIVGAGIAFVRMEDTPFFKQVAIVFTSFIRGTPIL 70

Query: 143 VVIFFLYKSVL 153
           + +F +Y  + 
Sbjct: 71  IQMFLVYYGLP 81


>gi|291548167|emb|CBL21275.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus sp. SR1/5]
          Length = 211

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 10/190 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R    K  + +   YIS  ++ G P ++ + + Y   +       F F    ++    
Sbjct: 32  FGRMSRNKVIRTIVSGYIS--IMRGTPLMLQLMVVYFGPY-------FIFGIRISMGYSL 82

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++++IA +   AA+ AEI R G+ ++P GQ EAA  LG    +    ++LPQ ++ I+P 
Sbjct: 83  IAVFIAFAINYAAYFAEIYRGGIESMPVGQYEAAKILGYNKVQTFFRIILPQVIKRILPS 142

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +T++ + L+K++SLA  V  A++ ++   I +     +   +I    Y   ++++A+ M 
Sbjct: 143 ITNEVITLVKDTSLAFVVAVAEMFTIAKQIASA-QTTMMPFVIAAIFYYVFNLIVAVVMQ 201

Query: 387 RLNAKIALKE 396
           ++   +    
Sbjct: 202 KVEKSMNYYR 211


>gi|972903|gb|AAA95980.1| ArtM [Haemophilus influenzae]
          Length = 227

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K  K+   LY++ F   G P LV   L Y            +      +S  +    +A
Sbjct: 42  NKWIKSAVNLYLTLFT--GTPLLVQFFLIYAGP--GQFQWIIDSPLWYVLSNAWFCAALA 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L   +AA+  ++    + A+P+GQ E+  ALGL   +    +L+P A++  +P  +++ +
Sbjct: 98  LRLNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTL-KILIPYALKRALPSYSNEII 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + K ++LA  +   D++     +      A+ I  I   IYL ++ +  L + +L  K+
Sbjct: 157 LVFKGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRKLEKKV 216

Query: 393 ALKEK 397
              E+
Sbjct: 217 LAFER 221


>gi|330432867|gb|AEC17926.1| glutamine ABC transporter permease protein [Gallibacterium anatis
           UMN179]
          Length = 219

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    + +    LT+       +FS ++GI+ ++        +  +    +   
Sbjct: 1   MDWQYVVNAIPKFIDATLLTLYLAGAGILFSLIIGIICAVLL-----VYPVRVLSRIAKA 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   +    P L+ I   Y           F                I+L+    +++A
Sbjct: 56  YIE--ISRNTPLLIQIFFLY-----------FGVAKLGIKLDSITCAIISLAFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R GL+AV +GQ+E+A+++GLT  +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EAFRGGLLAVSKGQIESALSIGLTPFQVFRYVIFPQAFAVAIPAIGANCLFLIKETSIVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+   +L+ +   II    +  E + + M  YL + + +++F+  L  +   
Sbjct: 163 AIAITELMFLAKEIIGMDYKTNEALFLLMLFYLIVLLPLSIFVRYLEKRQRR 214



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 38/70 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T +LA +G++ + IIG +     +   ++++ I + Y+E+ RN P L+ IFFL
Sbjct: 13  FIDATLLTLYLAGAGILFSLIIGIICAVLLVYPVRVLSRIAKAYIEISRNTPLLIQIFFL 72

Query: 149 YKSVLSVLPI 158
           Y  V  +   
Sbjct: 73  YFGVAKLGIK 82


>gi|317404139|gb|EFV84587.1| polar amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 227

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 14/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                    K+   + VLG +L      L+R+      +A+   
Sbjct: 1   MNYTFDFASVLEQWPLLAQGAWVTVKLSFCATVLGFILGTL-CALARNSRLGWLRAVAGG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   LI   P L+                 F         P      +AL     A+  
Sbjct: 60  YVE--LIRNTPLLIQAYFLI-----------FGLSSAGLTMPIMAGAVLALVINIGAYTC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ ++P+ Q+EA   L L+  +    V+L  A+  + P LTSQ++ L+  SS+  
Sbjct: 107 EIVRAGIESIPKDQLEAGECLALSRLQVFWHVVLRPAVERVYPSLTSQFVLLMLASSIMS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           AVG  +L+ V   I + T +  E+ ++   +YL+LS ++ L    L   +  + +K
Sbjct: 167 AVGAEELLGVANRIQSDTYRNFEVFIVLWGVYLALSWLMRLGFWLLAQVVFPRRRK 222



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T  L+F   +   I+GTL    R S    +  +   YVE+ RN P L+  
Sbjct: 14  WPLLAQGAWVTVKLSFCATVLGFILGTLCALARNSRLGWLRAVAGGYVELIRNTPLLIQA 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +FL   + S              + +N
Sbjct: 74  YFLIFGLSSAGLTMPIMAGAVLALVIN 100


>gi|307257777|ref|ZP_07539534.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306863683|gb|EFM95609.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 219

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R +    +T+  +    + S V G+++++        +  K    L   
Sbjct: 1   MNWSYVVNAIPRFIDAAIITLQLSFWGILLSLVFGLLIAIVT-----AYQVKPFYGLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 56  YIE--LSRNTPLLIQLFFLYY-----------GLPKIGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           AV  A+L+ V   II    +  E + +    YL + + I+L       K
Sbjct: 163 AVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFENK 211



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F G++ + + G L+        K    + R Y+E+ RN P L+ +FFL
Sbjct: 13  FIDAAIITLQLSFWGILLSLVFGLLIAIVTAYQVKPFYGLARGYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YYGLPKIGIK 82


>gi|123442311|ref|YP_001006290.1| amino acid transport system permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122089272|emb|CAL12119.1| amino acid transport system permease protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 230

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 3/221 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L         +  + + S  + + L L    + + F  +  + +   Y  T L+ G+P 
Sbjct: 5   YLPLLAQGAGLSLCVMLLSLAVALTLGLI-NAVIKLFGPRWLRWISTGY--TTLVRGIPE 61

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV++ L +                G      F+S  +A+     A+  E  R     V R
Sbjct: 62  LVIMLLLFFGGEMLVNGFLGLLGLGPVRFNTFVSGVLAIGIVFGAYYTETFRGAFQTVDR 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA+A G+   +  R ++LPQ +   IP + + +L L+K S+L   +G  D+V +  
Sbjct: 122 GQLEAAVAYGMRPGQVFRRIMLPQMLSFAIPGINNNWLGLMKASALISILGLEDMVWLAE 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                T +      +   IY+ ++ + +   + L  + AL 
Sbjct: 182 QAGRATQKPFLFYFLVAMIYMVITALSSWGFSLLARRYALS 222



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G   +  +    +  A  +G +    +L   + + WI   Y  + R IP LV+
Sbjct: 5   YLPLLAQGAGLSLCVMLLSLAVALTLGLINAVIKLFGPRWLRWISTGYTTLVRGIPELVI 64

Query: 145 IFFLYKSV 152
           +  L+   
Sbjct: 65  MLLLFFGG 72


>gi|186473892|ref|YP_001861234.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196224|gb|ACC74188.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 240

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G +        ++    +T + L  LY + F       LV+    +  
Sbjct: 24  MTVALTLAALAVGALFGAIVAA-AKLSRYRTARVLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ RS ++AV +G++EAA ++G
Sbjct: 82  STLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSKGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MPTMTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRASQIAAGSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   +YL ++ +     N   A++    ++
Sbjct: 202 LFFVVGGALYLVMTGISNRVFNHAEARVGRSFRR 235



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 38/92 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+  + T  L  + +    + G +V A +LS  +    +  +Y  VFR +P L+V
Sbjct: 14  WGGVLLLAALMTVALTLAALAVGALFGAIVAAAKLSRYRTARVLGDLYTTVFRGVPELLV 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I+  Y    +++            + +    +
Sbjct: 74  IYLFYFGGSTLVTTVGQWFGAEGFVGVPPFVI 105


>gi|323170778|gb|EFZ56428.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli LT-68]
          Length = 246

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 112/237 (47%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             LY+  F    +P +V     Y +        +  +           F+S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIDMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMTLVERKVRL 239



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIDMW 99


>gi|315640022|ref|ZP_07895148.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484231|gb|EFU74701.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 213

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 107/232 (46%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + L  + +S   +T+       + S  LGI+ + F          K      ++ +
Sbjct: 1   MAYFLSLFPQLMSGIGVTLKLFLLTIIGSVPLGIIFAFF-------LSSKFAPLRWVMQV 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +L+ G P L+ +   +   +  P++          V   F +   A     AA+ AEI
Sbjct: 54  YIWLMRGTPLLLQLIFVF---YGLPLIN--------IVFERFDAALFAFVLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ ++P+GQ EAA  L L   +  R +++PQ  +  +P + ++ +NL+K++SL   +
Sbjct: 103 FRGGIQSIPQGQYEAAQVLRLNPIQTIRKIIIPQVTKITLPSVGNEVINLVKDTSLIYIL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G +D++ +G   + +    +  +L    +YL+++ +  + + +L  ++    
Sbjct: 163 GLSDVMRLGKIAMERD-TTLVPLLGVAIVYLAMTGICTVVLRQLENRLDYYR 213



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L    +I +  +G +      S    + W+ +VY+ + R  P L+ + F+
Sbjct: 11  LMSGIGVTLKLFLLTIIGSVPLGIIFAFFLSSKFAPLRWVMQVYIWLMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +  + +      F   LN              + 
Sbjct: 71  FYGLPLINIVFERFDAALFAFVLNYAAYFAEIFRGGIQSI 110


>gi|270262368|ref|ZP_06190640.1| transporter [Serratia odorifera 4Rx13]
 gi|270044244|gb|EFA17336.1| transporter [Serratia odorifera 4Rx13]
          Length = 220

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 27/197 (13%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ------LHFD-KPVLGQFNFIGGST 261
           R         L  +Y+S F   G P +  + + Y       + FD  P       +  + 
Sbjct: 44  RLSPLWPLSWLSRIYVSLF--RGTPLIAQLFMIYYGLPQFGIEFDPFPAALIGLSLNTAA 101

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
            + E +                  R+ + ++ +GQ EAA ++G+T  +  R V+LPQA R
Sbjct: 102 YTSETL------------------RAAISSIEKGQWEAAASIGMTRWQTMRRVILPQAAR 143

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           + +PPL + ++ L+K++SLA  +   +L      I ++T +   + L    IY  ++ ++
Sbjct: 144 TALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITSRTLEVFTLYLAASLIYWVMATLL 203

Query: 382 ALFMNRLNAKIALKEKK 398
           +   NRL A +  ++++
Sbjct: 204 SALQNRLEAHVNRQDQE 220



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L+  GM    ++G L+   RLS    ++W+ R+YV +FR  P +  +F +
Sbjct: 15  LLKGAILTLQLSLGGMALGLLLGFLLALMRLSPLWPLSWLSRIYVSLFRGTPLIAQLFMI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       D       G+ LN
Sbjct: 75  YYGLPQFGIEFDPFPAALIGLSLN 98


>gi|257898670|ref|ZP_05678323.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|293572583|ref|ZP_06683557.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterococcus faecium E980]
 gi|257836582|gb|EEV61656.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|291607366|gb|EFF36714.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterococcus faecium E980]
          Length = 218

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 15/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F    +   + F    +    ++ +FS +   ++      +      +      L  I
Sbjct: 1   MDFSGAFSWMNVRFLLEGLKVTVEVSLFSIIFSFLIGGLTGVI------RFANIPFLSKI 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I  +  L L+ + +  +F  P +              F S   AL+ + +A ++EI
Sbjct: 55  LGIVIDIIRNLPLLLIIFFTYFALPQI--------GIQMNIFWSAVAALTIFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL AVP+GQMEA ++ GLT+ +  R ++LPQA +S+IP + SQ ++L+K++SLAV +
Sbjct: 107 FRAGLNAVPKGQMEAGLSTGLTYVETMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVII 166

Query: 345 GFADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 167 SLPELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 43/106 (40%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +I + +IG L G  R +    ++ I  + +++ RN+P 
Sbjct: 8   SWMNVRFLLEGLKVTVEVSLFSIIFSFLIGGLTGVIRFANIPFLSKILGIVIDIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L++IFF Y ++  +    +        + +    +         NA
Sbjct: 68  LLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNA 113


>gi|168487564|ref|ZP_02712072.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1087-00]
 gi|183569640|gb|EDT90168.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CDC1087-00]
          Length = 213

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+  + T+   A + +FS  LG++++       +  H        L+ I  +++ G P L
Sbjct: 12  LNGASTTVQVFALVLLFSIPLGVLIAFTLQVHWKPLHY-------LINIYIWVMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +PRG
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPRG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFSPFDRVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 174 AANRDASLVPMFL-AGAIYLILIGIVTIISKKVEKKYSYYR 213


>gi|167855355|ref|ZP_02478122.1| ArtM protein [Haemophilus parasuis 29755]
 gi|167853503|gb|EDS24750.1| ArtM protein [Haemophilus parasuis 29755]
          Length = 227

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 97/225 (43%), Gaps = 6/225 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     + T+  +   S ++   L++  T L      +  K +   +++ F   G 
Sbjct: 3   QEYFMVIVQGIPTSLLLTFVSLIVAFFLAVGMTFLL-SMENRLVKGIVNGFLTLFT--GT 59

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV   L Y      P +    F   S +S  +    + L+  ++A+   +    + A+
Sbjct: 60  PLLVQFFLIYAGPGQFPWIVASPF--WSLLSDAWFCAMLTLALNSSAYTTLLFHGAVKAI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ E   ALGL+  +    +L+P A++  +P  +++ + + K +SLA  +   D++  
Sbjct: 118 PKGQWETCAALGLSRLQTL-KILVPYALKRALPSYSNEIILVFKGTSLASTITIMDIMGY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +      A+ I  +   +YL ++ ++ + + R+  K+   E+
Sbjct: 177 ARQLYGTEYDALTIYGLAGVVYLVITGIMTVILRRVERKVLSFER 221


>gi|297624236|ref|YP_003705670.1| polar amino acid ABC transporter inner membrane subunit [Truepera
           radiovictrix DSM 17093]
 gi|297165416|gb|ADI15127.1| polar amino acid ABC transporter, inner membrane subunit [Truepera
           radiovictrix DSM 17093]
          Length = 408

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 78/312 (25%), Positives = 134/312 (42%), Gaps = 35/312 (11%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           F  +    + G+  AT++G  +G+    +  L   +  ++   F      V  FFL   +
Sbjct: 125 FWESVRWPYVGVSVATVLGFALGSALQGSAPLKRALPWLWAAAF------VGAFFLLYGL 178

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             V   P   +          R      LT   +      SF +G+ L+L      R   
Sbjct: 179 PGVRSGPWRVVP--------TREWGGMMLTFVLSFVGIGVSFPIGVALAL-----GRRSK 225

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               K   + YI   +I G P +  +       F   ++    F  G           +A
Sbjct: 226 LPAIKLFCIAYIE--IIRGAPLISWL-------FIASLMVPLIFNVGPERVSALTRALVA 276

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ ++AA++AE VR GL AVP+GQ EAA ALGL+  +A RL++LPQA++++IP +  Q +
Sbjct: 277 LTLFSAAYMAENVRGGLQAVPKGQSEAARALGLSGWQAMRLIILPQALKAVIPAIVGQAI 336

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQA-------IEIILIWMFIYLSLSIMIALFM 385
            L K++SL + VG AD   V   +  Q           +E+ L    +Y   +  +++  
Sbjct: 337 GLFKDTSLVLIVGLADFFQVHNIVAQQNASLQVVGGIRLELSLFLAVVYWFFAYRMSVAS 396

Query: 386 NRLNAKIALKEK 397
            +L  ++ +  +
Sbjct: 397 RQLEKELGVGTR 408



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + TF L+F G+  +  IG  +  GR S    +   C  Y+E+ R  P +  +F     
Sbjct: 196 GMMLTFVLSFVGIGVSFPIGVALALGRRSKLPAIKLFCIAYIEIIRGAPLISWLFIASLM 255

Query: 152 VLSVLPIPDHSIV 164
           V  +  +    + 
Sbjct: 256 VPLIFNVGPERVS 268


>gi|167585824|ref|ZP_02378212.1| histidine transport system permease protein [Burkholderia ubonensis
           Bu]
          Length = 237

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 90/230 (39%), Gaps = 6/230 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT---RLSRHFHEKTGKALPL 221
           +   +    R   +      T   I ++  V+ I L    +    ++R   +K       
Sbjct: 1   MIDLIQEYWRNYLYTDGYRLTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLSGAVW 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY  T++  G P  V + L Y   +    +     +  +          +A +  T A+ 
Sbjct: 61  LY--TYVFRGTPLYVQLLLCYTGLYSLQAVRGTPML-DAFFREGMNCTLLAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + A   G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A
Sbjct: 118 TEIFAGAIKATSYGEIEAARAYGMSTFTMYRRVILPSALRRALPLYSNEVILMLHATTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ +   + + T  +     I   +YL +S  +     +   +
Sbjct: 178 FTATVPDILKIARDVNSATYMSFHAFGIAALLYLVISFTLVWLFRQAERR 227



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 3/85 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y    L G   T WL    +     +   +   R+S  K ++    +
Sbjct: 5   IQEYWRNYLYTDGYR---LTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVL 156
           Y  VFR  P  V +   Y  + S+ 
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQ 86


>gi|56697502|ref|YP_167870.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679239|gb|AAV95905.1| glutamate/aspartate ABC transporter, permease protein [Ruegeria
           pomeroyi DSS-3]
          Length = 218

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 17/218 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                   L++       V   VLG +L+L           +    LPL  +S   +  +
Sbjct: 14  PFLWQGLQLSLLLTFLAVVGGIVLGTLLALM----------RLSGILPLSLLSAGYVNLI 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            ++ LI + +  +F  P+       G       F S  IA   + AA+ +EI+R+G+ +V
Sbjct: 64  RSVPLILVIFWFYFLVPLALGRPIGG-------FYSALIAFVMFEAAYYSEIIRAGIQSV 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ+ A  A GL + +  R V+LPQA R+++P L +Q + L +++SL   V   D ++V
Sbjct: 117 RQGQVHAGQATGLNYWQIQRYVVLPQAFRNMVPILVTQGIILFQDTSLVFVVSLRDFMTV 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              +    G+  E+ +    +Y  +    +LF+ RL  
Sbjct: 177 SSIVARTEGRLAEMYVFAALVYFVICFAGSLFVRRLQK 214



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 36/71 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   +  L F  ++   ++GTL+   RLS    ++ +   YV + R++P ++VIF+ 
Sbjct: 16  LWQGLQLSLLLTFLAVVGGIVLGTLLALMRLSGILPLSLLSAGYVNLIRSVPLILVIFWF 75

Query: 149 YKSVLSVLPIP 159
           Y  V   L  P
Sbjct: 76  YFLVPLALGRP 86


>gi|270292048|ref|ZP_06198263.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|293364294|ref|ZP_06611020.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307702740|ref|ZP_07639692.1| nopaline transport system permease protein nocM [Streptococcus
           oralis ATCC 35037]
 gi|322374985|ref|ZP_08049499.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|270279576|gb|EFA25418.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|291317140|gb|EFE57567.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307623856|gb|EFO02841.1| nopaline transport system permease protein nocM [Streptococcus
           oralis ATCC 35037]
 gi|321280485|gb|EFX57524.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 240

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 1/214 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + + VL  + +LF   L + +  +  ++  L+Y++         L+L      
Sbjct: 18  PITLIIMIVAMVLSFLPALFL-ALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L                  +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQFLKSIGSDFDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIARVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E   +    Y+ +  +I    + L      KEK
Sbjct: 197 FESYFVIFLQYILICGLIQWGFSLLEKGYVKKEK 230



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 36/101 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    M+ + +    +  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGVPITLIIMIVAMVLSFLPALFLALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
               S+L     SI   F +F  +       +         
Sbjct: 74  SLFPSLLNQFLKSIGSDFDIFKLDPLYYAFIIYSLMTVGSL 114


>gi|66045741|ref|YP_235582.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256448|gb|AAY37544.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 220

 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 26/241 (10%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FATRLSRHFHE 213
            P      +      L +  L+    +    A   +   + G+VL+   F  RL    + 
Sbjct: 3   QPPGWLQELWNAREVLWSGFLTSIQCSALAIAAGTLIGMLAGLVLTYGGFFARLPIRLYV 62

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              +  P+  +   + + +P L                              F +  I L
Sbjct: 63  DLIRGTPVFVLVLAVFYMVPAL------------------------GWQISAFQAGAIGL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    
Sbjct: 99  TLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILPTWVNSSTE 158

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++A
Sbjct: 159 IVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVA 218

Query: 394 L 394
           L
Sbjct: 219 L 219


>gi|297627339|ref|YP_003689102.1| polar amino acid ABC transporter, inner membrane protein
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923104|emb|CBL57691.1| polar amino acid ABC transporter, inner membrane protein
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 212

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 14/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A + + +F LG VL++           +  + + +  IS F++     +  I     ++F
Sbjct: 15  ALVTLGAFGLGFVLAIPLM------FARRARLMVVRGISGFIVDLARGIPPIVWLLMIYF 68

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L          +     +  I L   TA ++AEI R G++AV +GQ EAA ALGL 
Sbjct: 69  GLPNL--------GIMLDPIPAAIIGLGIITAGYLAEIFRGGMLAVRKGQFEAANALGLG 120

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
              +   V+ PQAMR++ P LT+  + L+K+SS+A  +G  ++V    +    + + + +
Sbjct: 121 GWTSFTRVVAPQAMRAMQPGLTTYSIGLIKDSSIASVIGVTEMVYTANSYAKISKEGVLL 180

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                 IYL +S+ + L   R+ A 
Sbjct: 181 FFEAALIYLVISVPLGLLARRIEAH 205


>gi|206560950|ref|YP_002231715.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|198036992|emb|CAR52913.1| histidine transport system permease protein [Burkholderia
           cenocepacia J2315]
          Length = 237

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 84/205 (40%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R    K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKRKWLSGAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +     +  +          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQAVRGTPML-DAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 TFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S  +     +   +
Sbjct: 203 FGIAALLYLVISFTLVWLFRQAERR 227



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y    + G   T WL    +     +   +   R+S  K ++    +
Sbjct: 5   IQEYWRNYLYTDGYR---ITGVAITLWLLVVSIGLGFCLSVPLAVARVSKRKWLSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|332093515|gb|EGI98573.1| histidine transport system permease protein hisQ [Shigella boydii
           3594-74]
          Length = 204

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 9/208 (4%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPV 250
            + ++G++ +      +R           +    T LI G+P LVL+ L +  L      
Sbjct: 2   LAVIIGLIGAGGKLSQNRLSGL-------IFEGYTTLIRGVPDLVLMLLIFFGLQIALNT 54

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A G T  + 
Sbjct: 55  VTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQV 113

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T +     ++ 
Sbjct: 114 FRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVC 173

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEKK 398
             IYL  + +    +  L  + ++  K+
Sbjct: 174 GVIYLVFTTVSNGVLLFLERRYSVGVKR 201


>gi|241895358|ref|ZP_04782654.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871332|gb|EER75083.1| L-cystine ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 233

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 85/171 (49%), Gaps = 10/171 (5%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAA 279
           +L+   ++    P LV + + +              +G S +SP  +++    LS  T A
Sbjct: 62  ILWFYVWIFRSTPMLVQLFVVFY---------GLPKLGISWLSPSGWIAAIWVLSLNTGA 112

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           + +E +R+ + ++P  Q EAA ALG+T R+    ++LPQA R  IP L + +++L+K++S
Sbjct: 113 YASEAIRAAISSIPDTQREAAAALGMTDRQIFMRIILPQATRISIPTLANSFISLVKDTS 172

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           LA  V   ++  +   +     + +++ L+   IY     ++++    +  
Sbjct: 173 LASVVTIVEMFYLSQQLAAVNFEPLKMYLLVAAIYALFVTILSIPQRYIQR 223


>gi|307709175|ref|ZP_07645634.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
 gi|307620121|gb|EFN99238.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
          Length = 213

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS  ++T+     + +FS  LG++++       +  H        L+ I  +++ G P L
Sbjct: 12  LSGASMTLQVFVLVLIFSIPLGVLIAFALQVHWKLLHH-------LINIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +P+G
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  T     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFTPFATVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 174 AANRDASLVPMFL-AGAIYLILIGIVTILAKKVEKKYSYYR 213



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G L+        KL+  +  +Y+ + R  P L+ + F+
Sbjct: 11  LLSGASMTLQVFVLVLIFSIPLGVLIAFALQVHWKLLHHLINIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S+    D          LN 
Sbjct: 71  YYVLPSIGIRLDRLPAAIIAFVLNY 95


>gi|242239985|ref|YP_002988166.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132042|gb|ACS86344.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 229

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 86/219 (39%), Gaps = 3/219 (1%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                   ++ + S VL +V+ L     ++    +        Y  T LI G+P LVL+ 
Sbjct: 10  MDGARMTLQLAICSLVLALVIGLVGAA-AKLSSSRLLSGCFSAY--TTLIRGVPDLVLML 66

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L +                        ++  I L     A+  E  R   +AVPRGQ+EA
Sbjct: 67  LIFYGLQMVLNSLTDTLGMEQIDIDPLVAGIITLGFIYGAYFTETFRGAYLAVPRGQIEA 126

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+A G +  K  R ++ P  MR  +P + + +  +LK ++L   +G +D++         
Sbjct: 127 AVAFGFSPMKVFRRIMFPSMMRFALPGIGNNWQVILKATALVSLLGLSDVIKATQLAGKG 186

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                   ++   +YL  + +    +  L  + +   +K
Sbjct: 187 AHHPFFFAIVAGALYLIFTTLSNGVLWWLEKRYSAGVRK 225



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  I+ G   T  LA   ++ A +IG +  A +LS+++L++     Y  + R +P LV+
Sbjct: 5   YSELIMDGARMTLQLAICSLVLALVIGLVGAAAKLSSSRLLSGCFSAYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|299820601|ref|ZP_07052491.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299818096|gb|EFI85330.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 213

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 105/228 (46%), Gaps = 19/228 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L     T+       + S  LG +++L           +  + +   Y+
Sbjct: 1   MTYVLQIMPALLEGLKTTLQVFFYTLLLSIPLGAIIAL-----GNVSKIRPLRWIIDTYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y   +  P            +   + ++  A     AA+ AEI
Sbjct: 56  --WIMRGTPLLLQLIFIY---YGAPYFHL--------ILERYEAVLFAFVLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++++ +GQ E+A  LGL++ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGILSIEKGQYESAKVLGLSYGQTVRKIVLPQVIKRVLPAIGNEVINLVKDSSLVYVL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  DL+  G    N+    I  +++   IYL L+ ++ L   R+    
Sbjct: 163 GLGDLLRAGKIASNRDVTLIP-LVLVGLIYLLLTAVLTLLFKRIEKHY 209



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
               A+L G   T  + F  ++ +  +G ++  G +S  + + WI   YV + R  P L+
Sbjct: 6   QIMPALLEGLKTTLQVFFYTLLLSIPLGAIIALGNVSKIRPLRWIIDTYVWIMRGTPLLL 65

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            + F+Y        I +    + F   LN 
Sbjct: 66  QLIFIYYGAPYFHLILERYEAVLFAFVLNY 95


>gi|170703753|ref|ZP_02894468.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170131336|gb|EDS99948.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 237

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  LS+    ++R    K       LY  T++  G P  V + L Y   +
Sbjct: 27  LWLLVVSIGLGFCLSVPL-AVARVSKRKWLSRAVWLY--TYVFRGTPLYVQLLLCYTGLY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +     +  S          +A +  T A+  EI    + A   G++EAA A G++
Sbjct: 84  SLQFVRGTPLLD-SFFRDGMRCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP A+R  +P  +++ + +L  +++A      D++ +   + + T  +   
Sbjct: 143 TFTMYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +YL +S M+     +   +
Sbjct: 203 FGIAALLYLVISFMLVWLFRQAERR 227



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 34/106 (32%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL    +     +   +   R+S  K ++    +Y  VFR  P  V +   Y
Sbjct: 20  ITGVAITLWLLVVSIGLGFCLSVPLAVARVSKRKWLSRAVWLYTYVFRGTPLYVQLLLCY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  +    ++  F        L   TL             +
Sbjct: 80  TGLYSLQFVRGTPLLDSFFRDGMRCTLLAFTLNTCAYTTEIFAGAI 125


>gi|148379137|ref|YP_001253678.1| ABC transporter, permease protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|148288621|emb|CAL82702.1| ABC transporter, permease protein [Clostridium botulinum A str.
           ATCC 3502]
          Length = 221

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 5/172 (2%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I    I       L+A  + L+F  P +     I        F +  IAL+  TA+F
Sbjct: 51  LYQIFGLYITFFRATPLVAQLFILYFGFPCI-----IPALKSMTAFQATVIALTLNTASF 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE +R+ L +V  GQ+EA  ++G+T  +    V+LPQA    +P + +Q++ ++K S+L
Sbjct: 106 MAETLRASLESVDVGQLEACYSMGMTRYQTMMRVVLPQAFVVALPSIGNQFIGIIKGSAL 165

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              VG AD+++        + +  E  L    IYL + I +      L  +I
Sbjct: 166 GFTVGLADIMAKAKMEAALSIRFFEAYLCVTLIYLVIVIFVEKIQRLLEKRI 217


>gi|91778421|ref|YP_553629.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691081|gb|ABE34279.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 248

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S VLG ++ +    ++     K  + L   Y+   LI   P +V +   +  
Sbjct: 23  VTLGLTAVSTVLGAIVGIAGASVA-VAGPKWARWLVAGYVE--LIRNTPFIVQLFFVF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F          E  +  +A++    A+  EIVR+G+ ++ RGQ++AA ALG
Sbjct: 78  ---------FGLPSLGIHIDEVQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+  R V+LPQA+ ++ P L SQ L ++  S++   +   DL      I ++  ++ 
Sbjct: 129 LHGRQVFRYVVLPQAIANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
           E  LI    YL LSI++   +NRL  
Sbjct: 189 ESYLIITATYLVLSIVLRQILNRLGR 214



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 39/95 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA  +  G   T  L     +   I+G    +  ++  K   W+   YVE+ R
Sbjct: 6   DFSGFGLYAGMLARGVAVTLGLTAVSTVLGAIVGIAGASVAVAGPKWARWLVAGYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P +V +FF++  + S+    D        M +N
Sbjct: 66  NTPFIVQLFFVFFGLPSLGIHIDEVQAAILAMTVN 100


>gi|170743938|ref|YP_001772593.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168198212|gb|ACA20159.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 385

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 20/228 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +    V S  LGI+L+L      R       +   +++I  +    L T+
Sbjct: 173 WGGMLVTIVVSLVGIVASLPLGILLAL-----GRRSRLPIVRLACVIFIEFWRGVPLITV 227

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A           +    F+ G       +   I ++ ++AA++AE+VR GL A+P+G
Sbjct: 228 LFMA----------NVMLPLFLPGDITVDRLLRPLIGVALFSAAYMAEVVRGGLQAIPKG 277

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A +LGL++ +  RLV+LPQA+R +IP + + ++ L K+++L   VG  D +    +
Sbjct: 278 QTEGANSLGLSYWQGMRLVILPQALRIVIPGIVNSFIALFKDTTLVSIVGIFDFIRTIES 337

Query: 356 IINQTGQAIEI-----ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                  A               Y      ++ +   +  ++A  + +
Sbjct: 338 ARIDPNWAAPTVVTTGYAFAALFYFVFCFGMSRYALFVERRLAAGQTR 385



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 37/71 (52%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T++  G + T  ++  G++ +  +G L+  GR S   +V   C +++E +R +P + V+F
Sbjct: 170 TSLWGGMLVTIVVSLVGIVASLPLGILLALGRRSRLPIVRLACVIFIEFWRGVPLITVLF 229

Query: 147 FLYKSVLSVLP 157
                +   LP
Sbjct: 230 MANVMLPLFLP 240


>gi|170740014|ref|YP_001768669.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168194288|gb|ACA16235.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 223

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 14/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                     +   + V+G+ +++    L R         L   
Sbjct: 1   MSYEFEFGEVFASWPELAWGALHTLVLSGLAMVIGMAVAVLG-ALGRTSGPAWLSGLIGA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   +I   P L+ I + +   F  P L       G  + P+  +  +AL     A+  
Sbjct: 60  YIE--VIRNTPFLIQIFVIF---FGLPSL-------GLRLDPD-SAALLALVVNVGAYGI 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++  GQ+EA   LGL   +  R V+L  A+++I P LTSQ++ L+ NSS+  
Sbjct: 107 EIIRAGIESIDHGQIEAGRTLGLRPLQIFRYVVLKPAIQAIYPSLTSQFILLMLNSSVCS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A+  ++L +  G I ++  ++ E+ L+   IY +LS+++      +      K
Sbjct: 167 AIAASELTAAAGDIQSRNFRSFEVYLVVTGIYFALSVVLWGLFAGIERAFLRK 219



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G ++T  L+   M+    +  L   GR S    ++ +   Y+EV RN P L+ IF ++  
Sbjct: 20  GALHTLVLSGLAMVIGMAVAVLGALGRTSGPAWLSGLIGAYIEVIRNTPFLIQIFVIFFG 79

Query: 152 VLSV 155
           + S+
Sbjct: 80  LPSL 83


>gi|327191403|gb|EGE58428.1| octopine ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 234

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +F  S   G +L+L    + R    +        YI  F+  G P L+ + L + 
Sbjct: 18  PTTLILFSLSIFFGGLLALVIVTM-RVSGNRYLSGFAKGYI--FVFRGSPLLIQMFLVFY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EA
Sbjct: 75  ------GLGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIEA 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++     R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+Q
Sbjct: 129 ARSIGMSGFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQ 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T + +E+ L    IYL L+ +I   M  L   ++   +
Sbjct: 189 TYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRR 226


>gi|302522278|ref|ZP_07274620.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|302431173|gb|EFL02989.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 300

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 107/242 (44%), Gaps = 17/242 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                             L     T+   A   V +  LG V  +   RLS H   +   
Sbjct: 47  WIKWKPFFTDSQAWTTYLLPGLGQTLLAAAISMVIALPLGAVFGIA--RLSDHVWVRVPS 104

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           A  + +        +P L+++ + Y ++          +   ST      ++   L  Y 
Sbjct: 105 ATVVEF-----FRSIPVLIMMIVAYAVYAQ--------YTSVSTDDRPLYAVVTGLVLYN 151

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A+ +AEIVR+G++++P+GQ EAA A+GL   +  R +LLPQ++ +++P + SQ + ++K+
Sbjct: 152 ASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQTMRSILLPQSVTAMLPAIVSQLVVIVKD 211

Query: 338 SSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++    +GF++L++    +    G   I    I   IY+ ++  +      L  ++   
Sbjct: 212 TAIGGSILGFSELINAVRPLSAAYGANTIACFTIVGVIYIIVNFTLTSLATWLEKRLRAG 271

Query: 396 EK 397
           +K
Sbjct: 272 KK 273



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 36/88 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T   ++ T +L G   T   A   M+ A  +G + G  RLS +  V       VE FR+
Sbjct: 54  FTDSQAWTTYLLPGLGQTLLAAAISMVIALPLGAVFGIARLSDHVWVRVPSATVVEFFRS 113

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           IP L+++   Y        +      L 
Sbjct: 114 IPVLIMMIVAYAVYAQYTSVSTDDRPLY 141


>gi|242240517|ref|YP_002988698.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132574|gb|ACS86876.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 245

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 15/223 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI----STFLI 229
                     DT       +  + ++  L A  L       T  ++ L+          I
Sbjct: 3   YQWLALWRYADTFLSAAWLALQITLLAFLLAVALGLLSALATSSSVALIRWLSHVYVEFI 62

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P L+ I + +           F           F +  +AL     A+++E  R+G+
Sbjct: 63  RNTPVLLQIFIVF-----------FALPSIGITLNAFTAGVLALGINVGAYLSETFRAGI 111

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +VP+GQ+EAA  LG+  R+    V+LPQA R++ P + +  + LL  +SL  A+   +L
Sbjct: 112 QSVPKGQLEAAWILGMPRRQMFLHVVLPQAARAVWPAIINNLIQLLLGTSLLSAIALPEL 171

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 I  +T   I+   +   IYL LS + +   N    ++
Sbjct: 172 TGTATVINARTLLYIQTFSVVALIYLLLSNLFSWLGNVAGRRL 214


>gi|314922832|gb|EFS86663.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 gi|314966263|gb|EFT10362.1| conserved hypothetical protein [Propionibacterium acnes HL082PA2]
 gi|314980789|gb|EFT24883.1| conserved hypothetical protein [Propionibacterium acnes HL110PA3]
 gi|315090238|gb|EFT62214.1| conserved hypothetical protein [Propionibacterium acnes HL110PA4]
 gi|315093427|gb|EFT65403.1| conserved hypothetical protein [Propionibacterium acnes HL060PA1]
 gi|327327044|gb|EGE68825.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Propionibacterium acnes HL103PA1]
          Length = 198

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +GL  ++   L  ++ F  P   QF  I    V     +  I L     A++ EI RS
Sbjct: 1   MFWGLLAVLYPTLPIEVPFGGP---QFASIETEQVVTTLATTIIGLDLNENAYLTEITRS 57

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL +V  GQ EAA  LG+      R V++PQ MR II PL ++ + +LK +SL +AV F 
Sbjct: 58  GLESVDVGQTEAAKTLGMKPSLIMRRVIIPQPMRVIILPLGNETIGMLKTTSLVLAVPFT 117

Query: 348 -DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            DL      + N+    I ++++  F YL ++ ++ +  + L
Sbjct: 118 LDLQYATSAMANRIYAPIPLLVVTAFWYLVMTSVLMIGQHFL 159


>gi|254472990|ref|ZP_05086388.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211957711|gb|EEA92913.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 199

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 11/207 (5%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            S +L ++L+     + R        A   L+IS F   G P LV + L Y   +  P L
Sbjct: 4   VSMILALILA-SLFAIIRVVRFPVLDAATRLFISFF--RGTPLLVQLFLFY---YGLPQL 57

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F      T      +  + L+ + +A++AE +R+ ++ V R Q EAA ++G++  +  
Sbjct: 58  VSF-----LTAIDGVTAAIVGLTLHFSAYMAESIRAAILGVDRSQWEAAKSIGMSTGQMM 112

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA R   P L + +++L+K++SLA  +G  +L+         +    E  ++  
Sbjct: 113 RRIILPQAARVAAPTLINYFIDLIKSTSLAFTLGVTELMGAAQKEAAGSFLYFETFIVVA 172

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
            IY  +   +A   +++  +++    +
Sbjct: 173 VIYWVVVESLAFVQSKIENRLSKAVSR 199


>gi|330967849|gb|EGH68109.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 219

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS V G+   +  +   R            L I   L   +P LV + L +   F
Sbjct: 28  LLAIVFSSVGGLCYGVLRSLGKRWLEIP-------LRIYLELFRAIPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + LS + A+ + E++R GL ++PRGQ EA +A+GL 
Sbjct: 78  GLPIFFGLSI-------PAFWCAVLVLSLWGASEVGEVMRGGLRSIPRGQREAGLAIGLG 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  VG  II +T +++ I
Sbjct: 131 LGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   ++     L  +
Sbjct: 191 YGFLFLFFFIVCYPLSAASRVLERR 215



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ +++ G   G  R    + +    R+Y+E+FR IP LV ++  
Sbjct: 16  LITGAGRTLGISLLAIVFSSVGGLCYGVLRSLGKRWLEIPLRIYLELFRAIPVLVWLYLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|261409441|ref|YP_003245682.1| ectoine/hydroxyectoine ABC transporter permease EhuC [Paenibacillus
           sp. Y412MC10]
 gi|261285904|gb|ACX67875.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Paenibacillus sp. Y412MC10]
          Length = 217

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 19/228 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA--TRLSRHFHEKTGKALPLLYISTFLI 229
               L       +    +  FS +L I +S  A   RLS+ +  +T  A     +   + 
Sbjct: 5   WIDFLPTLLKGAEITIIVAFFSAILAIAMSFAAGLCRLSKLWIVRTATA-----VYVEIF 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G   LV +   + L+F  P +            P+ ++  +A+     A+ +EIVRS +
Sbjct: 60  RGTSLLVQL---FWLYFALPFI--------GIELPKMLAAILAIGLNFGAYGSEIVRSAV 108

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVP+GQ EAA+AL +   +    V+LPQA   ++PP  +Q + L+K++SL   +  ADL
Sbjct: 109 LAVPKGQWEAAVALNMKPWQRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADL 168

Query: 350 VSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 + N       EI+++ +F+Y  ++ ++++ +  L  K+    
Sbjct: 169 TYQAMVLRNNYISWTTEILVLLLFMYFVIATLVSMAVRLLERKLTAGR 216



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 66/191 (34%), Gaps = 1/191 (0%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  +AF   I A  +    G  RLS   +V     VYVE+FR    LV 
Sbjct: 8   FLPTLLKGAEITIIVAFFSAILAIAMSFAAGLCRLSKLWIVRTATAVYVEIFRGTSLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLSLF 203
           +F+LY ++  +       +     + LN        +     A     +   + + +  +
Sbjct: 68  LFWLYFALPFIGIELPKMLAAILAIGLNFGAYGSEIVRSAVLAVPKGQWEAAVALNMKPW 127

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
               +    + + + LP        +    +LV       L +   VL        + + 
Sbjct: 128 QRLWNVILPQASLRMLPPFGNQLVELIKSTSLVYFITMADLTYQAMVLRNNYISWTTEIL 187

Query: 264 PEFMSLYIALS 274
              + +Y  ++
Sbjct: 188 VLLLFMYFVIA 198


>gi|167922531|ref|ZP_02509622.1| histidine transport system permease protein [Burkholderia
           pseudomallei BCC215]
          Length = 237

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 89/225 (39%), Gaps = 4/225 (1%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT-RLSRHFHEKTGKALPLLYIST 226
           G +  N   S           +++    LG+   L     ++R    +       LY  T
Sbjct: 6   GQYWQNYLFSDGYRLSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWLY--T 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++  G P  V + L Y   +   V+    ++  S          +A +    A+  EI  
Sbjct: 64  YVFRGTPLYVQLLLCYTGIYSLSVVHDHAWL-DSFFRSAMNCTLLAFTLNECAYATEIFA 122

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             + +   G++EA +A G++  K    V+LP A+R  +P  +++ + +L  ++LA     
Sbjct: 123 GTIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTATV 182

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            D++ V   + + T  + +   I   +Y  +   +     R+ A+
Sbjct: 183 PDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLFRRMEAR 227



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 67/218 (30%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    L G   T WL    +     +   +   R S N+ V+    +
Sbjct: 5   IGQYWQNYLFSDGYR---LSGLAITLWLLVVSLGLGFGLAVPLAIARASRNRAVSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  +         L+L A        
Sbjct: 122 AGTIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA + Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIW 219


>gi|257125595|ref|YP_003163709.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049534|gb|ACV38718.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 245

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G        S+   TM             G+ L+ F  + + +      K + ++     
Sbjct: 34  GKEWQIYMNSYLITTMGLTVGGAAIGIFFGMALAFFKFQKTNNEIVNMIKDV-VIDEYVD 92

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P ++ + +   +                 V   +    IAL   +AA++ E VRS
Sbjct: 93  IMRGTPMVLQLLILSVV---------------IAVFDNYWVAVIALGMNSAAYVEETVRS 137

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++ +GQMEAA A G+ +R A   +++PQA+++I+P L ++++NL K +S+   +   
Sbjct: 138 GIESIDKGQMEAARATGMPYRMAMNEIIMPQAVKNILPALVNEFINLFKETSIVGYISVV 197

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           D+     ++      +++ IL    +Y     + +    RL  ++ 
Sbjct: 198 DITMNSKSLQAVYY-SVKPILFTGVVYYVSVKLFSFIGKRLEMRLK 242


>gi|84499806|ref|ZP_00998094.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Oceanicola batsensis HTCC2597]
 gi|84392950|gb|EAQ05161.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Oceanicola batsensis HTCC2597]
          Length = 434

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 101/211 (47%), Gaps = 19/211 (9%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            S  +GIVL+L      R       K + +++I       L TL+ +A     +F  P  
Sbjct: 239 LSLPIGIVLAL-----GRRSQMPLIKWICVIFIEFIRGVPLITLLFVANVVLAYFLPP-- 291

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                    +     + + I ++ + +A+IAE++R GL A+P+GQ EAA +LGL + +A 
Sbjct: 292 --------GSNFDLILRVIIMITMFASAYIAEVIRGGLAALPKGQYEAADSLGLDYPQAM 343

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VSVGGTIINQ--TGQAIEII 367
           RL++LPQA++  IP + +  + L K+++L   +   D+  +  G  + +    G   E+ 
Sbjct: 344 RLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDMVGMIRGPILASTDWNGVYWELF 403

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +    ++  +   I+ +   L  ++    K+
Sbjct: 404 IFAALLFFIVCYNISQYSQWLERQLDTGHKR 434


>gi|318057584|ref|ZP_07976307.1| putative amino acid ABC transporter permease protein [Streptomyces
           sp. SA3_actG]
 gi|318076839|ref|ZP_07984171.1| putative amino acid ABC transporter permease protein [Streptomyces
           sp. SA3_actF]
          Length = 244

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 13/226 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     L    L      +    +  V   ++   LS     ++   +    + +  + +
Sbjct: 1   MGDFFSLFFDSLDDVGSGLWVTVQATVLGALVAFALSFVFGFMANSAYLLV-RGISRVIV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G    V +   + L +  P+L  +                +A      A+ +E+
Sbjct: 60  EFF--RGTSLYVQV---FWLFYALPLLTGYQL-------DPLFCGVVAFGINYGAYGSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L AVPR Q EAA+AL  +  +  R V+LPQA   +IP  TS  + LLK + L   +
Sbjct: 108 VRGALNAVPRAQFEAAVALNFSPVQRMRKVILPQAWVQMIPSFTSLLIMLLKATPLLWLI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              D+ +V   + ++TG      L  + IY  L+ ++ L MN L  
Sbjct: 168 TAVDITAVVQQMRDRTGATAPAYLTLLVIYFVLAYLLTLGMNALER 213



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 27/62 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T      G + A  +  + G    SA  LV  I RV VE FR     V +F+L+ +
Sbjct: 18  GLWVTVQATVLGALVAFALSFVFGFMANSAYLLVRGISRVIVEFFRGTSLYVQVFWLFYA 77

Query: 152 VL 153
           + 
Sbjct: 78  LP 79


>gi|289642307|ref|ZP_06474455.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           symbiont of Datisca glomerata]
 gi|289507839|gb|EFD28790.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           symbiont of Datisca glomerata]
          Length = 285

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 5/186 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
             T +     +    ++  +  L  + +   + F   VL  +         P    + I 
Sbjct: 94  IATTRISAARWYRWAVVGAVELLRGVPVVIAIFFAAQVLPVYGL-----KLPPLWYIVIG 148

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ Y +  I+EIVR+G++AVP+GQ +AA ALGLTH +  R+VLLPQA RS++P L SQ +
Sbjct: 149 LTAYNSVIISEIVRAGILAVPKGQRDAASALGLTHGQTLRIVLLPQAFRSMLPALISQLV 208

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +LK++SL   + + +L+      I      I+  L+   I++ ++ ++      L A++
Sbjct: 209 VILKDTSLGAFISYEELLRRALIAIQTLHNPIQTYLVIGGIFILINYLVTRLATYLEARL 268

Query: 393 ALKEKK 398
           + +  +
Sbjct: 269 SGRRAR 274



 Score = 36.8 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 4/128 (3%)

Query: 64  LSERAGFEIDQGIVPYTSDSS----YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119
           L+    F+  +    +             +  G V+T   A   M  + ++G L+   R+
Sbjct: 40  LAANGQFDGSRWSPLFNPGDEDFADLWRLLGGGLVHTLTAAALAMSLSLLLGVLIATTRI 99

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           SA +   W     VE+ R +P ++ IFF  + +            +  G+   N  +   
Sbjct: 100 SAARWYRWAVVGAVELLRGVPVVIAIFFAAQVLPVYGLKLPPLWYIVIGLTAYNSVIISE 159

Query: 180 TLTMDTNA 187
            +     A
Sbjct: 160 IVRAGILA 167


>gi|227875260|ref|ZP_03993402.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus mulieris ATCC 35243]
 gi|269978149|ref|ZP_06185099.1| probable amino-acid ABC transporter permease protein [Mobiluncus
           mulieris 28-1]
 gi|227844165|gb|EEJ54332.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus mulieris ATCC 35243]
 gi|269933658|gb|EEZ90242.1| probable amino-acid ABC transporter permease protein [Mobiluncus
           mulieris 28-1]
          Length = 217

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 5/183 (2%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +  +     PL ++  F I  +    L+     ++F    L    F    +    F ++ 
Sbjct: 36  YGGRVCPFKPLAWVVQFYISIMRGTPLMLQLMVVYFGPYYL----FGVQISAEYRFYAVI 91

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA +   AA+ AEI R G  A+P GQ EAA  LG + R+    + +PQ  R+++P +T++
Sbjct: 92  IAFAINYAAYFAEIYRGGFQAIPAGQSEAAFVLGYSQRRTFFTIKVPQMFRTVLPSITNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SLA A+ + ++ ++     + T  ++   +     Y   +I++A+ M+RL  
Sbjct: 152 VITLVKDTSLAFAISYTEMFTLAKQYASATA-SMAPFVAAAVFYYVFNIVVAVLMDRLEK 210

Query: 391 KIA 393
            ++
Sbjct: 211 HVS 213


>gi|149187234|ref|ZP_01865532.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
 gi|148838770|gb|EDL55709.1| amino acid ABC transporter, permease protein [Vibrio shilonii AK1]
          Length = 300

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 3/191 (1%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV---LGQFNFIG 258
           +F    +  F +      PL++I  F  F    L+ +    +L           Q    G
Sbjct: 106 VFLRVPANIFIQLVRNIPPLVFIFIFYFFISNQLIPLLGLSELLRGSSSEISGWQSFLFG 165

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             ++    +S  I +   ++A++AEIVR+GL A+P+GQ EA  +LGL+     R V+ PQ
Sbjct: 166 PQSLWENLLSGVICIGLLSSAYVAEIVRAGLNAIPKGQWEAGQSLGLSTWHQYRDVIAPQ 225

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            + +I P L  Q ++L+K++S+   +   ++  VG  I N +G   EI LI    Y  L 
Sbjct: 226 VLTTISPALAGQAISLVKDTSIVSLISIQEMTFVGTEIANSSGLIFEIWLIVGLCYFLLC 285

Query: 379 IMIALFMNRLN 389
             ++L   +L 
Sbjct: 286 FSLSLLFKKLE 296



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 64/166 (38%), Gaps = 9/166 (5%)

Query: 62  GFLSERAGFEIDQGI-------VPYTSDSSYAT-AILVGFVNTFWLAFSGMIPATIIGTL 113
            +   R+   I+          + +T  S+      + G ++T  L+  GM+ A  +GTL
Sbjct: 37  AWFGYRSSIGINYHWRWSQAFELVFTPTSNGGLPYFVQGAISTLRLSIWGMLLALSLGTL 96

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +G  + S    +     +++++ RNIPPLV IF  Y  + + L        L  G     
Sbjct: 97  LGLAKHSNMVFLRVPANIFIQLVRNIPPLVFIFIFYFFISNQLIPLLGLSELLRGSSSEI 156

Query: 174 RGLSFPTLTMDTNAKIFVFSFV-LGIVLSLFATRLSRHFHEKTGKA 218
            G         +  +  +   + +G++ S +   + R       K 
Sbjct: 157 SGWQSFLFGPQSLWENLLSGVICIGLLSSAYVAEIVRAGLNAIPKG 202


>gi|138895921|ref|YP_001126374.1| amino acid ABC transporter permease [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248812|ref|ZP_03147512.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Geobacillus sp. G11MC16]
 gi|134267434|gb|ABO67629.1| Amino acid ABC transporter (permease) [Geobacillus
           thermodenitrificans NG80-2]
 gi|196211688|gb|EDY06447.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Geobacillus sp. G11MC16]
          Length = 237

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/233 (23%), Positives = 92/233 (39%), Gaps = 15/233 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                   +         LT+      +  S VLGI+ +L      R       +     
Sbjct: 3   WDWNIVKDVFPLIFRAMWLTLGLTLACYAVSLVLGIIWTLL-----RRAPWAWFRWTVNG 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +    I   P LV +   +      P +       G T+SP   +  I L  + + + +
Sbjct: 58  VLEF--IRSTPPLVQLYFLFYAWPLVPHV-------GVTLSP-IAAAIIGLGVHYSTYTS 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RSG+ AV +GQ EAA+AL  +  +    V+LPQA+  IIP L +  + + K      
Sbjct: 108 EVYRSGIDAVDKGQWEAALALNFSRARTWTKVILPQAIPPIIPMLGNYLIIMFKEIPTTA 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++G   ++        Q    +E   I  F +L LS   +LF+  L  K+  +
Sbjct: 168 SIGVMGMMLTAKMYGAQHWVYLEPFTIVAFFFLLLSYPSSLFVQWLEKKMNRR 220


>gi|88596920|ref|ZP_01100156.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562122|ref|YP_002343901.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|88190609|gb|EAQ94582.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359828|emb|CAL34615.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284925734|gb|ADC28086.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|315928204|gb|EFV07521.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929759|gb|EFV08929.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 233

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 10/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+  F  +  +++ LF   +S +F  K  + +  LYI        P L+ +   Y 
Sbjct: 18  WLTIKLSFFGIIFSLIIGLFCILMS-YFKIKILENICKLYIEF--SRNTPLLIQLFFLYY 74

Query: 244 ------LHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 +H +  P L         T+ P F    + LS    +++AE +R+G  A+ + Q
Sbjct: 75  ALPKFNIHLEQIPPLDLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA ++LG +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++
Sbjct: 135 FEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSL 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + T +  E++ +    YL + + ++  + +   ++
Sbjct: 195 NSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLD 90


>gi|300901165|ref|ZP_07119270.1| putative ATP synthase F0, A subunit [Escherichia coli MS 198-1]
 gi|300959228|ref|ZP_07171304.1| putative ATP synthase F0, A subunit [Escherichia coli MS 175-1]
 gi|300314173|gb|EFJ63957.1| putative ATP synthase F0, A subunit [Escherichia coli MS 175-1]
 gi|300355404|gb|EFJ71274.1| putative ATP synthase F0, A subunit [Escherichia coli MS 198-1]
          Length = 255

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 115/259 (44%), Gaps = 18/259 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLS 201
           +  FF  + +             PFG       +          +   ++ +F++G    
Sbjct: 1   LPSFFWSRFMSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFG 60

Query: 202 LFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +  T  +R        + +  + +PL+         +P L+   +      +     QF 
Sbjct: 61  ILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQF- 119

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                     F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VL
Sbjct: 120 ----------FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL 169

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LP A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+
Sbjct: 170 LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYV 229

Query: 376 SLSIMIALFMNRLNAKIAL 394
            ++  I L M  +  K+ L
Sbjct: 230 LINAFIMLVMTLVERKVRL 248



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P +V
Sbjct: 29  TYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIV 88

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
             F  Y  +  +LP      
Sbjct: 89  QFFTWYLVIPELLPEKIGMW 108


>gi|295098054|emb|CBK87144.1| L-histidine ABC transporter membrane protein/L-arginine ABC
           transporter membrane protein/L-lysine ABC transporter
           membrane protein/L-ornithine ABC transporter membrane
           protein [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 228

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L A   ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELAISSVVLAVLIGL-AGAGAKLSANRPLALIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNGVTDAIGMEQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPKGHIEAATAYG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGVIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG      +LSAN+ +A I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELAISSVVLAVLIGLAGAGAKLSANRPLALIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|257056921|ref|YP_003134753.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586793|gb|ACU97926.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 236

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 15/216 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +  V   V   +LS  A  L+        + +   Y+  +   G   +V +   + +
Sbjct: 18  VTLQATVGGIVFATILSFVAG-LAMLSRFVAVRVVARTYVEIW--RGTSEVVQL---FWI 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+L  F  +          +  + L     A+ AEIVR  + AVP+ Q E A+AL 
Sbjct: 72  YFVLPILTGFQLL-------PLWAGIVVLGLNFGAYGAEIVRGAVQAVPKEQHEGAVALN 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII--NQTGQ 362
            +  +  R V+LPQA+  ++PP  + ++ LLK +SL   +   ++      ++    TG+
Sbjct: 125 FSTSQRLRRVILPQALVEMMPPFNNLFIQLLKGTSLLTFITVPEMTHQAQVVLVPAYTGE 184

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              I  I +  YL +SI+I L M  L    ++K  +
Sbjct: 185 VALIFSILLVFYLLVSIVITLVMRGLERWASVKVGR 220



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 37/75 (49%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + + + + + I  G + T      G++ ATI+  + G   LS    V  + R YVE++R 
Sbjct: 2   FDNTAHFVSVIADGLLVTLQATVGGIVFATILSFVAGLAMLSRFVAVRVVARTYVEIWRG 61

Query: 139 IPPLVVIFFLYKSVL 153
              +V +F++Y  + 
Sbjct: 62  TSEVVQLFWIYFVLP 76


>gi|114567254|ref|YP_754408.1| amino acid ABC transporter permease [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114338189|gb|ABI69037.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 195

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 75/163 (46%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I L   +     ++  +  +         +   +  S   +A+ AEI R+ + A  +G
Sbjct: 15  VYIRLVQGIPIVLLLMILYYILFAQVDIDPVLIAVVGFSLNFSAYAAEIFRTAIDATDKG 74

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA ALG +       V LPQAM  I+P    ++++++K +S+   +   DL  +   
Sbjct: 75  QLEAAYALGFSQYAGFFKVTLPQAMLHILPIYKGEFVSMVKMTSVVGYIAIQDLTKMSDI 134

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I ++T  A   +    FIY  L+ +    M R+  +I  K +K
Sbjct: 135 IRSRTFDAFFPLFATAFIYFVLTYLFIYLMGRVEIQIDPKRRK 177


>gi|239931079|ref|ZP_04688032.1| amino acid ABC transporter transmembrane protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291439449|ref|ZP_06578839.1| amino acid ABC transporter permease protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291342344|gb|EFE69300.1| amino acid ABC transporter permease protein [Streptomyces
           ghanaensis ATCC 14672]
          Length = 238

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 13/223 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +         +    ++ V S +L   +S     ++R       + L   Y   F   
Sbjct: 1   MTSGLWELVLEGVWVTIQLLVLSALLATAVSFVVG-VARTHRLWIVRFLAGFYTEVF--R 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G   LV+I   + + F  P    +  +          +  +AL     A+ +EIVR  L 
Sbjct: 58  GTSALVMI---FWVFFVLPPAFGWQLV-------PLWAGTLALGLTYGAYGSEIVRGALA 107

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV   Q E  IAL  T  +  RL+LLPQA+  +IPP ++  + LLK ++L   +G  DL 
Sbjct: 108 AVDPAQREGGIALSFTPWQRMRLILLPQAVPEMIPPFSNLLVELLKGTALVSIMGMGDLA 167

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  +     ++ EI    + IY  ++ ++   M  L  K+ 
Sbjct: 168 FSGNLVRLALQESAEIYTYILLIYFVIAFLLTRLMRGLEKKLK 210



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L     + AT +  +VG  R     +V ++   Y EVFR    LV+I
Sbjct: 6   WELVLEGVWVTIQLLVLSALLATAVSFVVGVARTHRLWIVRFLAGFYTEVFRGTSALVMI 65

Query: 146 FFLYKSVLSVLPI 158
           F+++  +      
Sbjct: 66  FWVFFVLPPAFGW 78


>gi|319794876|ref|YP_004156516.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315597339|gb|ADU38405.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 220

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 14/225 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + F               +     +     VLG+++       +R       +A+   
Sbjct: 1   MNIEFDFGAVLAEWPLLLRGVAWTVGLTAIGTVLGMIVGTL-CAWARSGGPAWLRAIVGT 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   LI   P +V +   +   F  P         G  +SPE ++  IA+     A+  
Sbjct: 60  YVE--LIRNTPFIVQLFFIF---FGLPA-------AGVKLSPE-VASVIAMVMNLGAYST 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ+EAA++L L+  +    V+LP A++ + P + SQ + ++  S++  
Sbjct: 107 EIIRAGIEATPKGQIEAAVSLALSKSQVFLRVVLPPALKKVWPSMVSQIIIVMLGSAVCG 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +   +L      I ++  +A E  +I   IYL+LS+ +   +N 
Sbjct: 167 QISTEELSYAANLIQSRNFRAFEAFIIATLIYLALSVALRRLLNW 211



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L   G +   I+GTL    R      +  I   YVE+ RN P +V +
Sbjct: 14  WPLLLRGVAWTVGLTAIGTVLGMIVGTLCAWARSGGPAWLRAIVGTYVELIRNTPFIVQL 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FF++  + +        +     M +N
Sbjct: 74  FFIFFGLPAAGVKLSPEVASVIAMVMN 100


>gi|307727664|ref|YP_003910877.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588189|gb|ADN61586.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 220

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T A       ++G V+++      + F  +  +AL  LYI  F   G P LV + L Y  
Sbjct: 26  TWAAGVAIGMLIGFVIAVL-----QLFCGRWVRALLRLYIELF--RGTPFLVQLFLLYYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G T+ P   +  + L  Y +A+ AE  RSG  +VP G +EAA  LG
Sbjct: 79  GPSF----------GLTLEP-MTAGVLGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +
Sbjct: 128 MTRTQAVLRIQMPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFV 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E +L+    YL+L  + +       A+IA 
Sbjct: 188 ETLLMLCVCYLALVELTSRAGMWAEARIAR 217



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 36/81 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I VG   T     +G+    +IG ++   +L   + V  + R+Y+E+FR  P LV +F L
Sbjct: 16  IAVGLATTLGTWAAGVAIGMLIGFVIAVLQLFCGRWVRALLRLYIELFRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y    S     +       G+
Sbjct: 76  YYGGPSFGLTLEPMTAGVLGL 96


>gi|312114909|ref|YP_004012505.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220038|gb|ADP71406.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 214

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 1/189 (0%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +  H  T + L   Y + F         L+ + +        +     +        F++
Sbjct: 24  KTSHIATARGLAEAYTTIFRALPELL-TLLLIYFGGQILLQKIAAATGLPVDVQVSPFVA 82

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL+    A+ +E++ + L AV RGQ+EAA + G++ R+  R V LPQ +R  +P L 
Sbjct: 83  GLVALALVFGAYSSEVILAALNAVERGQIEAARSFGMSPRQVFRRVRLPQMLRFALPGLG 142

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +L LLK++SL   +  +DL+      +  T +  +   +   IYL+++ +  L + R 
Sbjct: 143 NNWLVLLKDTSLVSVIALSDLLRETTIAVQATREPFKFYAVACVIYLAMTALSTLAIARA 202

Query: 389 NAKIALKEK 397
                   +
Sbjct: 203 ERAAGRGFR 211


>gi|253687585|ref|YP_003016775.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754163|gb|ACT12239.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 246

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             LS   +T+  +   ++ +F++G +  +  T  +R        + +  + +PL+     
Sbjct: 24  WILSGLQVTVTLSICAWIIAFLVGSLFGILRTVPNRFVAGIGTCYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+  ++      +     QF           F+S  I L  +TAA + E VR+
Sbjct: 84  WYLVVPELLPASIGMWFKAELDPNIQF-----------FLSSMICLGLFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+PPLTS+ LNL+KNS++A  +G  
Sbjct: 133 GIQSLPRGQKAAGLAMGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M  +  K  L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFTAITLAYVGINAIIMLIMQIVERKTRL 239



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   IL G   T  L+    I A ++G+L G 
Sbjct: 3   IDWNWGIFLQAAPFG----------NTTYLGWILSGLQVTVTLSICAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ VA I   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNRFVAGIGTCYVELFRNVPLIVQFFTWYLVVPELLPASIGMW 99


>gi|158424240|ref|YP_001525532.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331129|dbj|BAF88614.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 234

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 101/214 (47%), Gaps = 14/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ V S VLG+ L +    +   +    G+ + L      ++   P LV + + +  
Sbjct: 25  LTIQLSVSSIVLGLALGIMLASVRAMYGGLIGRIIKL---YVEVVRNTPFLVQLFIIF-- 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PVL                +  I ++    A+  EI+R+G+ AV R Q+EA  +LG
Sbjct: 80  -FGLPVL--------GVRVDATAAALIGMTINLGAYTTEIIRAGIDAVHRSQVEAGQSLG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R +++P A+  + P L SQ++ +   SS+  A+   +L SV   I +Q+ ++ 
Sbjct: 131 MTTYQIYRHIIIPPAIAKVYPALCSQFILMTLASSVCSAISAEELSSVTAQIESQSYRSF 190

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E+ +I   IYL+LS+++      +   +  +  K
Sbjct: 191 EVYVIATLIYLALSMVLRGIFALVGWYLFKRRPK 224



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 48/104 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L G + T  L+ S ++    +G ++ + R     L+  I ++YVEV RN P LV
Sbjct: 14  NYRDELLSGLLLTIQLSVSSIVLGLALGIMLASVRAMYGGLIGRIIKLYVEVVRNTPFLV 73

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +F ++  +  +    D +     GM +N    +   +    +A
Sbjct: 74  QLFIIFFGLPVLGVRVDATAAALIGMTINLGAYTTEIIRAGIDA 117


>gi|157414760|ref|YP_001482016.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385724|gb|ABV52039.1| polar amino acid transport system permease protein [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|315931092|gb|EFV10066.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 233

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 109/237 (45%), Gaps = 14/237 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTG 216
           +   F +      L+   LT+  +    +FS ++G+   L +    +        + +  
Sbjct: 1   MDFDFILVQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL    FL + LP       K+ +H +  P L         T+ P F    + LS 
Sbjct: 61  RNTPLLIQLFFLYYALP-------KFNIHLEQIPPLDLICLSVEETLRPSFACAIVGLSF 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              +++AE +R+G  A+ + Q EA ++LG +     R V+LPQA+   +P +++  + L+
Sbjct: 114 LGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLI 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K +S+   +   DLV++  ++ + T +  E++ +    YL + + ++  + +   ++
Sbjct: 174 KETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLD 90


>gi|239813838|ref|YP_002942748.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239800415|gb|ACS17482.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 244

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 20/249 (8%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
                   V           +  ++ +      ++ +       V   ++GI+ +L    
Sbjct: 1   MGSNWDWQVFLQDPGGKYPTYWQWMLSAWGWTVSVALLALVVALVLGSLVGIIRTL---- 56

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPE 265
                   +   + L      L   +P LV I L Y  +    PV+            P 
Sbjct: 57  ------PNSPWLIRLGNAWVELFRNIPLLVQIFLWYHVIPALVPVMKG---------VPS 101

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+ + +AL  +T+A IAE VRSG+ A+P+GQ  A +A+G T  +  R V+LP A R IIP
Sbjct: 102 FVLVVLALGFFTSARIAEQVRSGIQALPKGQRYAGMAVGFTTPQYYRYVILPMAYRIIIP 161

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PLTS+ +N+ KNSS+A AV   +L         +T + IE+ L    +Y+  +  I   M
Sbjct: 162 PLTSETMNIFKNSSVAFAVSVTELTMFAMQAQEETSRGIEVYLAVTGLYVISAFAINRIM 221

Query: 386 NRLNAKIAL 394
             +  K  +
Sbjct: 222 AYIEKKTRV 230



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPL 142
           +Y   +L  +  T  +A   ++ A ++G+LVG  R   N   +  +   +VE+FRNIP L
Sbjct: 20  TYWQWMLSAWGWTVSVALLALVVALVLGSLVGIIRTLPNSPWLIRLGNAWVELFRNIPLL 79

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           V IF  Y  + +++P+          + 
Sbjct: 80  VQIFLWYHVIPALVPVMKGVPSFVLVVL 107


>gi|149925440|ref|ZP_01913704.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Limnobacter sp. MED105]
 gi|149825557|gb|EDM84765.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Limnobacter sp. MED105]
          Length = 275

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 81/200 (40%), Positives = 122/200 (61%), Gaps = 16/200 (8%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIA----------------LKYQLHFDKPVLGQFN 255
           +    + +PLL     + F +   + IA                L +    + PV G+F+
Sbjct: 74  YINLFRNVPLLLQLLAIYFAITQFLPIASQAWSVGDSVFLSKSGLAFPSFSEAPVRGRFS 133

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             GG  +SPE++++ +AL  YTAAF+AEIVR+G+ AV  G  + A+ALGL++ + TR V+
Sbjct: 134 IEGGWVLSPEYLAVLLALVVYTAAFVAEIVRAGVQAVRPGMRQGALALGLSNAQTTRYVV 193

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LP A+R ++P L++QYLNLLKN+SL VAVG+ +LVSV  T INQ+G+A+E +LI +  Y 
Sbjct: 194 LPLALRVVVPSLSNQYLNLLKNASLGVAVGYPELVSVANTAINQSGKAVECVLIILVTYA 253

Query: 376 SLSIMIALFMNRLNAKIALK 395
            LS + A  MN LN ++   
Sbjct: 254 LLSAVAAGLMNALNTRVNRG 273


>gi|157371562|ref|YP_001479551.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157323326|gb|ABV42423.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 228

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 2/175 (1%)

Query: 225 STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            T LI G+P LVL+ L +  L      L +        + P   +  I L     A+  E
Sbjct: 52  YTTLIRGVPDLVLMLLIFYGLQIALNNLTELLGFAQIDIDP-LSAGIITLGFIYGAYFTE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AV +GQ+EAA A G T  +  R +L P  MR  +P + + +  +LK ++L   
Sbjct: 111 TFRGAYMAVSKGQIEAATAYGFTGSQIFRRILFPAMMRFALPGIGNNWQVILKATALVSI 170

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  D+V         T Q     ++   +YL  + +    +  L  + +L  ++
Sbjct: 171 LGLNDVVKATQLAGKGTYQPFFFAIVAGVVYLVFTTVSNGVLLWLERRYSLGVRR 225


>gi|170721982|ref|YP_001749670.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169759985|gb|ACA73301.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 239

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 91/227 (40%), Gaps = 2/227 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L    F +                + +    +G+ L L    L+    ++  +A    + 
Sbjct: 5   LSLLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVV-ALAARSRKRLPRAWSTTFS 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F       L L+ + Y        L       G  +   F++  IA S   AAF +EI
Sbjct: 64  TVFRGL-PELLTLLIIYYGCQIAAQQLLAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
             +    +P+GQ+EA  ALGL  R A   V+LPQ  R  +P L++ +L+LLK++SL   +
Sbjct: 123 WLAAFKTLPKGQLEACAALGLGKRTAFFKVVLPQLTRIALPGLSNNWLSLLKDTSLVSTI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL+      ++ T + +    +    YL  S +       +  +
Sbjct: 183 SLVDLMRQTNLAVSVTKEPMFFYGVACLGYLLFSALSGRVFAYIERR 229



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L G + T  LA + +     +G +V     S  +L       +  VFR +P L+ 
Sbjct: 15  WGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWSTTFSTVFRGLPELLT 74

Query: 145 IFFLYKS 151
           +  +Y  
Sbjct: 75  LLIIYYG 81


>gi|94986057|ref|YP_605421.1| amino acid ABC transporter permease [Deinococcus geothermalis DSM
           11300]
 gi|94556338|gb|ABF46252.1| amino acid ABC transporter membrane protein, PAAT family
           [Deinococcus geothermalis DSM 11300]
          Length = 231

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 18/196 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +      S ++G +L +     +R F       L  +Y+   ++ G+P +VL+++ Y  
Sbjct: 30  VSLCALGVSVMVGTLLGV-----ARVFRMPLLGWLGNIYVE--VVRGIPLIVLLSVVY-- 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L              F +  +AL  Y+AA+ +EIVR GL +VP GQ+EAA +LG
Sbjct: 81  -YGLPAL--------GLTLASFPAAVLALGLYSAAYTSEIVRGGLGSVPIGQIEAARSLG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+   A R V+LPQA R  +P L +++++L+  SSLA AV   +L + G  I   T +  
Sbjct: 132 LSRAGALRYVVLPQAWRVALPALGNEFISLILGSSLASAVTLQELFAQGKYITGVTYRQF 191

Query: 365 EIILIWMFIYLSLSIM 380
           E+  +   IY  L+ +
Sbjct: 192 EVYAVLALIYFLLTFI 207



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 32/55 (58%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           ++   +  + ++GTL+G  R+    L+ W+  +YVEV R IP +V++  +Y  + 
Sbjct: 30  VSLCALGVSVMVGTLLGVARVFRMPLLGWLGNIYVEVVRGIPLIVLLSVVYYGLP 84


>gi|268592304|ref|ZP_06126525.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Providencia rettgeri DSM 1131]
 gi|291312085|gb|EFE52538.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Providencia rettgeri DSM 1131]
          Length = 250

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 9/235 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +   N          D   +    + V+ ++    +  L                 
Sbjct: 1   MDFSIIEQNWQYLLFGTFPDGPLEGAALTLVISLLAGAASIVLGTLGGIALAMLRGFWVN 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               I G    + +I L +  +F  P+L            P   ++  AL+  T+A++A 
Sbjct: 61  LFAAILGFFRAIPVIMLIFWTYFLLPILLGMEI-------PGIATVVCALALITSAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V++G++A+  GQ +A ++LG +  +    V+LPQA+R ++P   +Q++ L+K++SLA  
Sbjct: 114 AVKAGILAIGAGQWQAGLSLGFSRWQVLWNVVLPQALRMMVPSFINQWVALIKDTSLAYV 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           VG A+L  +   + N+     +E+ L   FIY  +   + +  NR+  K++ + +
Sbjct: 174 VGVAELSFLATQVNNREMVYPLEVFLFVAFIYFVMCFAVEIIANRVATKLSAQHQ 228


>gi|225628152|ref|ZP_03786187.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
 gi|225616977|gb|EEH14024.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella ceti str.
           Cudo]
          Length = 281

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 14/261 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR   P      +   + +   I      + F +             + TN  I + + +
Sbjct: 34  FRQTCPSGSPVSVTARMTNHPTITSKETTMDFSVSALGGAFPQLLPAIGTNLVISIIAMI 93

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L ++     T L R        A+  + IS   I G P LV I L Y   +  P L    
Sbjct: 94  LALIGGTALTIL-RTLGIAPLNAVIGVVISF--IRGTPILVQIFLFY---YGLPAL---- 143

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G  +SP   +  +A++  ++ FI EI+R GL  +  G +EAAIALG+  +     V+
Sbjct: 144 ---GLDLSP-IQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWTKVI 199

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ    I+PPL ++   ++K ++L   +   +++     + N + + +E +L    I  
Sbjct: 200 LPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETLLCAAIILF 259

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           +++++++     L  + A + 
Sbjct: 260 AVNLVLSQCGRVLEMRFAARR 280



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 8/191 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L        ++   MI A I GT +   R      +  +  V +   R  P LV IF  
Sbjct: 77  LLPAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISFIRGTPILVQIFLF 136

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFAT 205
           Y  + ++             +  N+       +       ++     +  LGI   +  T
Sbjct: 137 YYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWT 196

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           ++     +   + +P L      I     L+ +    ++      +   +F    T+   
Sbjct: 197 KV--ILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETL--- 251

Query: 266 FMSLYIALSCY 276
             +  I  +  
Sbjct: 252 LCAAIILFAVN 262


>gi|225574974|ref|ZP_03783584.1| hypothetical protein RUMHYD_03053 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037821|gb|EEG48067.1| hypothetical protein RUMHYD_03053 [Blautia hydrogenotrophica DSM
           10507]
          Length = 220

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 90/188 (47%), Gaps = 15/188 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R     T   + ++        G P ++ + + Y   +       F F    T     ++
Sbjct: 48  RPLRWLTSAYISVM-------RGTPLMLQLMVVYFGPY-------FFFGISITQGYSMIA 93

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + I  S   AA+ AEI R G+ ++P GQ EAA  LG    +    ++LPQ ++ I+P +T
Sbjct: 94  VLIGFSLNYAAYFAEIYRGGIESMPVGQYEAAQILGYKKSQTFVHIILPQVIKRILPAVT 153

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ + L+K++SLA  +  A++ ++   I + +   +   +I    Y   ++++A+ M+++
Sbjct: 154 NEVITLVKDTSLAFVLAVAEMFTIAKQIAS-SQTTMMPFVIAAVFYYVFNLLVAVVMDKI 212

Query: 389 NAKIALKE 396
             +++   
Sbjct: 213 EKRLSYYR 220


>gi|330951075|gb|EGH51335.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 277

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 69  GFLQGAALTLFVSVCSIVVSVALGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 128

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 129 IYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIF 188

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 189 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 248

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 249 VLYWIMSIGLELLQSRLERHYG 270


>gi|313899533|ref|ZP_07833042.1| ABC transporter, permease protein [Clostridium sp. HGF2]
 gi|312955640|gb|EFR37299.1| ABC transporter, permease protein [Clostridium sp. HGF2]
          Length = 260

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 88/187 (47%), Gaps = 14/187 (7%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
              +K       LY+  F   G P +V   + Y  H  +PVL                + 
Sbjct: 69  RIIKKILHGFVGLYVWIF--RGTPMMVQALIIY--HGLRPVLN----------WSPVTAG 114

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
              +S  T A++AEI+R+G+ ++ +GQ EAA +LG+T  +    ++LPQA+R+  P + +
Sbjct: 115 ITIISINTGAYMAEIIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIGN 174

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +++  +K+SS+   +G  +L     ++       +   ++   +YL L+ +    ++ + 
Sbjct: 175 EFIVNIKDSSMLNVIGVIELYFQSSSVAGSLMLYVPTFIVAAILYLLLTTLATQLLSFVE 234

Query: 390 AKIALKE 396
            ++ +  
Sbjct: 235 GRMNMPR 241


>gi|297567185|ref|YP_003686157.1| polar amino acid ABC transporter inner membrane subunit
           [Meiothermus silvanus DSM 9946]
 gi|296851634|gb|ADH64649.1| polar amino acid ABC transporter, inner membrane subunit
           [Meiothermus silvanus DSM 9946]
          Length = 364

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 12/213 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +       VF  V G+V+++      R       + L  +Y   F       L
Sbjct: 154 LQAFWKNVWMFCVAEVFILVWGLVIAVARMVPGRA--GSPIRFLATVYTDAFR-----GL 206

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             I   Y +    P+      +      P      +AL+    A++AE+ R+GL ++   
Sbjct: 207 PTIISIYLIALGLPLAN----VPLVRDWPPEWLAVLALTVSYGAYVAEVYRAGLDSIHPS 262

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA +LGL+  +  R V++PQA+R IIPPL + ++ L K+++L   VG  D  +    
Sbjct: 263 QWAAARSLGLSFSQTLRFVIIPQAVRRIIPPLLNDFIALQKDTALVNVVGVIDGFNQAKI 322

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           I +     +  +     +++ ++I    F++RL
Sbjct: 323 IASNRFN-LSAVTTVAILFMLITIPQTRFVDRL 354


>gi|213614416|ref|ZP_03371242.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
          Length = 178

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 18/184 (9%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +     F  +LG VL+L      R       + L   YIS F   G 
Sbjct: 13  PYLLKGAVFTLQLSIGGMFFGLLLGFVLALM-----RMSPLWPVRWLARFYISIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +  + + Y        L QF             +  I LS  TAA+ +E +R+ + A+
Sbjct: 66  PLIAQLFMIYY------GLPQFG-----IELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA ++G+T  +  R  +LPQA R  +PPL++ +++L+K++SLA  +   +L   
Sbjct: 115 DKGQWEAAASIGMTPWQTLRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQ 174

Query: 353 GGTI 356
              I
Sbjct: 175 AQLI 178



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 43/101 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G V T  L+  GM    ++G ++   R+S    V W+ R Y+ +FR  P +  +F 
Sbjct: 14  YLLKGAVFTLQLSIGGMFFGLLLGFVLALMRMSPLWPVRWLARFYISIFRGTPLIAQLFM 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +Y  +       D       G+ LN    +  TL    +A 
Sbjct: 74  IYYGLPQFGIELDPIPAAMIGLSLNTAAYTSETLRAAISAI 114


>gi|315612441|ref|ZP_07887354.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315315422|gb|EFU63461.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 240

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 1/214 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + + VL  + +LF   L + +  +  ++  L+Y++         L+L      
Sbjct: 18  PITLIIMIVAMVLSFLPALFL-ALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L                  +I  S  T    +EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQFLKSIGSDLDIFKLDPLYYAFIIYSLMTVGSFSEILRSAILTVDKGQLEAAHAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIARVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E   +    Y+ +  +I    + L      KEK
Sbjct: 197 FESYFVIFLQYILICGLIQWGFSLLEKGYVKKEK 230



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 36/101 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    M+ + +    +  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGVPITLIIMIVAMVLSFLPALFLALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
               S+L     SI     +F  +       +        F
Sbjct: 74  SLFPSLLNQFLKSIGSDLDIFKLDPLYYAFIIYSLMTVGSF 114


>gi|258545566|ref|ZP_05705800.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
 gi|258519266|gb|EEV88125.1| general amino acid ABC superfamily ATP binding cassette
           transporter, permease protein [Cardiobacterium hominis
           ATCC 15826]
          Length = 339

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 18/253 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +        VL VL        +     +         LT+   +   +FS   GI+L+L
Sbjct: 97  LWALLFALLVLPVLSWYLLRGGVFGLPEVRPNLWGGMMLTLVVASAGLLFSLPFGILLAL 156

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R       + + + +I  +    L T++ +A      F  P     N       
Sbjct: 157 -----GRTSDMPFLRGVCVAFIELWRGVPLVTVLFMANVMLPLFLPPSWHIDN------- 204

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               M   I ++ + +A++AE+VR GL A+PRGQ EAA +LGL +    RL++LPQA+ +
Sbjct: 205 ---LMRALIGVALFASAYMAEVVRGGLQAIPRGQFEAADSLGLGYWAKMRLIILPQALTT 261

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSV---GGTIINQTGQAIEIILIWMFIYLSLSI 379
           +IP +T+ ++ L K+++L   +G  D + +    G      G  +E       +Y  L  
Sbjct: 262 VIPGITNTFVGLFKDTTLVSIIGLYDFLGIVHSAGQDPAWLGHGMEGYAFCALVYFLLCY 321

Query: 380 MIALFMNRLNAKI 392
            ++    R+    
Sbjct: 322 GMSHTSYRIERHF 334


>gi|75906961|ref|YP_321257.1| amino acid ABC transporter permease [Anabaena variabilis ATCC
           29413]
 gi|75700686|gb|ABA20362.1| neutral amino acid ABC transporter membrane protein / L-glutamate
           ABC transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Anabaena variabilis ATCC
           29413]
          Length = 381

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 19/254 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLS 201
           +V  +L    L   PI    I   FG+   +  L    L     A I  V SF +G++L+
Sbjct: 141 LVAPWLSLIWLLSFPIILWLIGGGFGLRPVSSNLWNGLLLTLLMAAISIVLSFPIGVLLA 200

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L      R  +    +   +LYI   +I G+P + ++ L          +    F     
Sbjct: 201 L-----GRTSNLPVVRWFSILYIE--IIRGVPLIGILFLA--------QVMLPLFFAADV 245

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                +     L  ++AA++AE VR GL AV RGQ+EAA ALGL       L++LPQA+R
Sbjct: 246 RLDRVLRAIAGLVLFSAAYMAENVRGGLQAVSRGQVEAAKALGLNTFFVVLLIVLPQALR 305

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLS 378
           ++IP +  Q++ L K++SL   VG  +L  +  +I+ Q    G+  E+ L    IY    
Sbjct: 306 AVIPAVVGQFIGLFKDTSLLSLVGLVELTGIARSILAQPQFIGRYAEVYLFIGLIYWLFC 365

Query: 379 IMIALFMNRLNAKI 392
             ++L   RL  ++
Sbjct: 366 YSMSLASRRLERQL 379


>gi|309973358|gb|ADO96559.1| Arginine ABC transporter, permease protein ArtM [Haemophilus
           influenzae R2846]
          Length = 227

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 3/174 (1%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   L  G P LV   L Y            +      +S  +    +AL+  +AA+  +
Sbjct: 51  LYLTLFTGTPLLVQFFLIYAGP--GQFQWIIDSPLWFFLSNAWFCATLALALNSAAYSTQ 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +    + A+ +GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K ++LA  
Sbjct: 109 LFHGAVKAIHKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTALAST 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   D++     +      AI I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 168 ITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLAFER 221


>gi|220914865|ref|YP_002490173.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219952616|gb|ACL63006.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 248

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 98/245 (40%), Gaps = 4/245 (1%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           + + +            + F +F +            T  ++  +S  L +V+ +     
Sbjct: 1   MLEIIGPFFRGMYERTGMNFNIFYDPYEYGRFVSGASTTLQLIFWSLSLSLVIGVLG-AW 59

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++       +     YI  F     P + L+   + L    P +    +     V   F 
Sbjct: 60  AQGAKSPALRVGVGAYIQAFR-NTPPMIQLLFFYFGLGAFTPAIDMGGY--SQPVVSSFA 116

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              I+L  +  AF  EI R+G+ AVP   +EAA +L  +  +    + LP A R  +P L
Sbjct: 117 WAVISLGIFGGAFNVEIFRAGIEAVPDSTLEAAESLCFSRLQTYLYITLPLAFRISLPAL 176

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T+  ++L K +SLA  +   ++  V   + +      E++L+    Y+ +  ++A  ++ 
Sbjct: 177 TNNLVSLAKTTSLAYIITVPEMTYVLNQVWSDNLNVPEMMLVLFGFYIVVVTLLAAGLHA 236

Query: 388 LNAKI 392
           +  K+
Sbjct: 237 IERKL 241



 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 5/104 (4%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +      + ER G   +    PY     Y    + G   T  L F  +  + +IG L   
Sbjct: 5   IGPFFRGMYERTGMNFNIFYDPYE----YGR-FVSGASTTLQLIFWSLSLSLVIGVLGAW 59

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
            + + +  +      Y++ FRN PP++ + F Y  + +  P  D
Sbjct: 60  AQGAKSPALRVGVGAYIQAFRNTPPMIQLLFFYFGLGAFTPAID 103


>gi|330973076|gb|EGH73142.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 146

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 78/140 (55%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
              G  T    F S  +A   + AA+  EIVR+G+ ++ +GQM AA ALG+ + +  RL+
Sbjct: 7   WITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKGQMGAAQALGMNYSQMMRLI 66

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R + P L  Q + L +++SL   VG  D ++   +  +  G+A E ++I   +Y
Sbjct: 67  ILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRSSGDIIGRANEFLIIAGLVY 126

Query: 375 LSLSIMIALFMNRLNAKIAL 394
            ++S   +L + RL  + A+
Sbjct: 127 FTISFAASLLVKRLQKRFAV 146


>gi|283955889|ref|ZP_06373379.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792549|gb|EFC31328.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 1336]
          Length = 233

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 109/237 (45%), Gaps = 14/237 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTG 216
           +   F +      L+   LT+  +    +FS ++G+   L +    +        + +  
Sbjct: 1   MDFDFILVQAPAFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL    FL + LP       K+ +H +  P L         T+ P F    + LS 
Sbjct: 61  RNTPLLIQLFFLYYALP-------KFNIHLEQIPPLDLICLSVEETLRPSFACAIVGLSF 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              +++AE +R+G  A+ + Q EA ++LG +     R V+LPQA+   +P +++  + L+
Sbjct: 114 LGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLI 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K +S+   +   DLV++  ++ + T +  E++ +    YL + + ++  + +   ++
Sbjct: 174 KETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLD 90


>gi|209518060|ref|ZP_03266890.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501466|gb|EEA01492.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 240

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 91/214 (42%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G V        ++    ++ + +   Y + F       LV+    +  
Sbjct: 24  MTIALTLAALAVGAVFGALVAA-AKLSRHRSLRVIGDFYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F    +A+   + A+ AE+ RS ++AV +G++EAA A G
Sbjct: 82  STLLTTVGQWFGAEGFVGVPPFAIGALAVGMISGAYQAEVYRSAVLAVSKGELEAARATG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+         T Q +
Sbjct: 142 MHTLLVARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAAGSTHQYL 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +   IYL ++ +     N   A++    K+
Sbjct: 202 TFFAVGGAIYLVMTGISNRVFNHAEARVGRSFKR 235



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 39/92 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+  + T  L  + +    + G LV A +LS ++ +  I   Y  VFR +P L+V
Sbjct: 14  WGGVLLLASLMTIALTLAALAVGAVFGALVAAAKLSRHRSLRVIGDFYTTVFRGVPELLV 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I+  Y    ++L            + +    +
Sbjct: 74  IYLFYFGGSTLLTTVGQWFGAEGFVGVPPFAI 105


>gi|260904763|ref|ZP_05913085.1| ABC amino acid transporter, permease component [Brevibacterium
           linens BL2]
          Length = 219

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 95/231 (41%), Gaps = 16/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F        L     T+       + + VLG+++++    L R  +        L+
Sbjct: 3   WNWEFAAEALPILLRGFVNTLIATVIGTLIAVVLGLIIAVAIRSLPRWINW-------LI 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +    +   P ++ +   Y +    P         G    P  +  +I +  + + +++
Sbjct: 56  RLLVAFVRNTPLVMQLMFVYFIFAGIP---------GLVDVPALVIGFIVIGIHYSTYMS 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ +VP GQ EAA AL L   +    ++LPQA+R+ +P L +  + + K++    
Sbjct: 107 ESYRAGIDSVPPGQHEAATALSLPPVRKFTAIVLPQALRATVPSLGNYAVAMFKDTPFLF 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+   +LV+             E   +   I+L+ S   +L + R+  ++A
Sbjct: 167 AISVVELVTSAQQFGAAKFAYTEAFTLAGLIFLAASYPTSLLIQRMEKRLA 217



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 43/102 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GFVNT      G + A ++G ++     S  + + W+ R+ V   RN P ++ + F+
Sbjct: 15  LLRGFVNTLIATVIGTLIAVVLGLIIAVAIRSLPRWINWLIRLLVAFVRNTPLVMQLMFV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           Y     +  + D   ++   + +     ++ + +        
Sbjct: 75  YFIFAGIPGLVDVPALVIGFIVIGIHYSTYMSESYRAGIDSV 116


>gi|304415312|ref|ZP_07395997.1| membrane component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
 gi|304282830|gb|EFL91308.1| membrane component of arginine ABC transporter [Candidatus Regiella
           insecticola LSR1]
          Length = 222

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 99/218 (45%), Gaps = 7/218 (3%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T+  + + S  L +V +L  T +      KT     L+ I   L  G P 
Sbjct: 4   YLWQIMTGLSTSLTLTMVSLSLALVFALLFTLI---LTLKTPLLTSLVRIYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI-VRSGLIAVP 293
           LV I L Y      P + Q+ ++  +   P ++   IAL+  +AA+         + A+P
Sbjct: 61  LVQIFLIYYGPGQFPSIQQYPWLWHTLSQP-WLCAMIALALNSAAYTTPYCFYGAVQAIP 119

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ ++  ALG++  ++   +L P A++  +   +++ + + K++SL   +   D++   
Sbjct: 120 AGQWQSCAALGMSSAQSM-RILFPFAIKRSLSSYSNEVILVFKSTSLVYTITLMDIMGQS 178

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +  +T   + + +    +YLS++ ++ L M  L  +
Sbjct: 179 QMLYGRTYDVM-VFVAAGIVYLSINTLLTLLMRWLERR 215



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 5/118 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I+ G   +  L    +  A +   L          L+  + R+Y+ +F   P LV 
Sbjct: 4   YLWQIMTGLSTSLTLTMVSLSLALVFALLFTLILTLKTPLLTSLVRIYITLFTGTPLLVQ 63

Query: 145 IFFLYKS-----VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           IF +Y        +   P   H++  P+   +    L+    T        V +   G
Sbjct: 64  IFLIYYGPGQFPSIQQYPWLWHTLSQPWLCAMIALALNSAAYTTPYCFYGAVQAIPAG 121


>gi|227112258|ref|ZP_03825914.1| ABC transporter permease protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 221

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 13/231 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +   L    L      +    ++++ + VLG  L L    L R F ++        
Sbjct: 1   MHYQWDFSLVWHNLPVLLKGLGVTLELWLLAGVLGTALGLVLG-LFRVFGKRWLSLPARC 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++  F     P L+ +      ++  PVL    F   +  +        A       +  
Sbjct: 60  FVEIF--RNTPVLIQLI---WFYYAFPVLVGIQFSTFAAAALALTLYSAA-------YCT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+GL ++  GQ E A ALG+      R V+LPQ +R+++P LT++ + L K +SLA 
Sbjct: 108 EIFRAGLQSIDHGQWEGAKALGMRQAVILRRVVLPQVLRNMLPALTNRMIELAKVTSLAS 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   +L+  G  + +   + +EI+ +   +Y  L    +    RL  +  
Sbjct: 168 ILAVNELMYQGRLLSSTYYRPLEILTVVALLYFVLIWPGSYLAARLERRFR 218



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++        +L G   T  L     +  T +G ++G  R+   + ++   R +VE+FR
Sbjct: 6   DFSLVWHNLPVLLKGLGVTLELWLLAGVLGTALGLVLGLFRVFGKRWLSLPARCFVEIFR 65

Query: 138 NIPPLVVIFFLYKSVL 153
           N P L+ + + Y +  
Sbjct: 66  NTPVLIQLIWFYYAFP 81


>gi|268590403|ref|ZP_06124624.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
 gi|291314317|gb|EFE54770.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rettgeri DSM 1131]
          Length = 246

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 115/247 (46%), Gaps = 18/247 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF-- 211
                      PFG       L     +T+  +   ++ +F++G    +  T  +R    
Sbjct: 4   NWNWGIFLQEAPFGNTTYLGWLISGLEVTVTLSICAWIIAFLVGSFFGILRTVPNRFLAF 63

Query: 212 ----HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
               + +  + +PL+         +P L+  ++      D     QF           F+
Sbjct: 64  LGTAYVELFRNVPLIVQFFTWYLVIPELLPRSIGDWFKMDLDPNYQF-----------FI 112

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+PP+
Sbjct: 113 SSMLCLGLFTAARMTEQVRAAIQSLPRGQKSAALAMGLTLPQTYRYVLLPNAYRVILPPM 172

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++++I + M  
Sbjct: 173 TSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVGINVIIMILMTL 232

Query: 388 LNAKIAL 394
           L  K+ L
Sbjct: 233 LERKVRL 239



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 10/111 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           ++   G   + A F           +++Y   ++ G   T  L+    I A ++G+  G 
Sbjct: 3   INWNWGIFLQEAPFG----------NTTYLGWLISGLEVTVTLSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            R   N+ +A++   YVE+FRN+P +V  F  Y  +  +LP          
Sbjct: 53  LRTVPNRFLAFLGTAYVELFRNVPLIVQFFTWYLVIPELLPRSIGDWFKMD 103


>gi|324016085|gb|EGB85304.1| putative ATP synthase F0, A subunit [Escherichia coli MS 117-3]
          Length = 255

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 18/258 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSL 202
             FF  + +             PFG       +          +   ++ +F++G    +
Sbjct: 2   PSFFWSRFMSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 61

Query: 203 FATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
             T  +R        + +  + +PL+         +P L+   +      +     QF  
Sbjct: 62  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQF-- 119

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                    F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLL
Sbjct: 120 ---------FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLL 170

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           P A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ 
Sbjct: 171 PNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVL 230

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++  I L M  +  K+ L
Sbjct: 231 INAFIMLVMTLVERKVRL 248



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 12  IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 61

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 62  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 108


>gi|91778289|ref|YP_553497.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           xenovorans LB400]
 gi|91690949|gb|ABE34147.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 220

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T A       ++G ++++      + F  +  + +  +YI  F   G P LV + L Y  
Sbjct: 26  TWAAGVAIGMLIGFLIAVL-----QLFCGRWVRGILRVYIELF--RGTPFLVQLFLLYYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G T+ P   +  + L  Y +A+ AE  RSG  +VP G +EAA  LG
Sbjct: 79  GPSF----------GLTLEP-MTAGVLGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +
Sbjct: 128 LTRWQAVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFV 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E +L+    YL+L  + +       A+IA 
Sbjct: 188 ETLLVLCVCYLALVELTSRAGMWAEARIAR 217



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 35/81 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T     +G+    +IG L+   +L   + V  I RVY+E+FR  P LV +F L
Sbjct: 16  IAAGLATTLGTWAAGVAIGMLIGFLIAVLQLFCGRWVRGILRVYIELFRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y    S     +       G+
Sbjct: 76  YYGGPSFGLTLEPMTAGVLGL 96


>gi|295111597|emb|CBL28347.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Synergistetes bacterium
           SGP1]
          Length = 226

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 11/230 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      +  S   L       +   S    +++       SR+++    K   +++ 
Sbjct: 1   MIFQFDYFLKMFSIIFLGFKNTVSMAFLSLFFAVLIGFVLAA-SRYYNIPVLKQFSVVFT 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F     P +  + + Y                       F ++ I LS   AA++ E 
Sbjct: 60  SFF--RSTPFIAQLFVFYYGFAQVSAT--------VRGLSSFWAVVIVLSLSFAAYMGEN 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  + +V RGQ EA I++G+T  +  R +++PQA R  +P + + + NL K++SLA  V
Sbjct: 110 IRGAISSVDRGQFEAGISIGMTPWQTIRRIVIPQAARVALPGMVNSFANLFKSTSLAFTV 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D+ S     +N T + +E  +  + +Y  +  +++   + L   +  
Sbjct: 170 GVMDMTSCAKNEVNLTYRYLEGFVALLIVYWVILALVSYGQSLLERYLNR 219



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 2/135 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +GF NT  +AF  +  A +IG ++ A R     ++     V+   FR+ P +  +F  
Sbjct: 15  IFLGFKNTVSMAFLSLFFAVLIGFVLAASRYYNIPVLKQFSVVFTSFFRSTPFIAQLFVF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--FSFVLGIVLSLFATR 206
           Y     V             + + +   +         A   V    F  GI + +   +
Sbjct: 75  YYGFAQVSATVRGLSSFWAVVIVLSLSFAAYMGENIRGAISSVDRGQFEAGISIGMTPWQ 134

Query: 207 LSRHFHEKTGKALPL 221
             R         + L
Sbjct: 135 TIRRIVIPQAARVAL 149


>gi|271500848|ref|YP_003333873.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344403|gb|ACZ77168.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 223

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 84/188 (44%), Gaps = 5/188 (2%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                   L   YI+ F   G P LV I L Y        + + +++      P ++   
Sbjct: 39  LKTPVLSVLAKGYITLFT--GTPLLVQIFLIYYGPGQFESIRRIDWLWNLLSQP-WLCAV 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
            AL+  +AA+  ++    + A+P GQ ++  ALG+  R+    +LLP A +  +   +++
Sbjct: 96  SALALNSAAYTTQLFYGAVRAIPSGQWQSCAALGMNQRQTL-RILLPFAFKRALSSYSNE 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + + K +SLA  +   +++  G  +  +T   + +      +YL ++ ++ L M  +  
Sbjct: 155 VVLVFKGTSLAYTITLMEVMGYGQLLYGRTYDVL-VFGAAGIVYLCVNGLLTLLMRLIER 213

Query: 391 KIALKEKK 398
           +    E++
Sbjct: 214 RALRFEQR 221


>gi|257868424|ref|ZP_05648077.1| ABC-type amino acid transporter [Enterococcus gallinarum EG2]
 gi|257802588|gb|EEV31410.1| ABC-type amino acid transporter [Enterococcus gallinarum EG2]
          Length = 250

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 4/178 (2%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  +    I G P LV +   Y +++  P L Q   I  S+ + + + +YI     TAAF
Sbjct: 56  LAAVFVSFIRGTPILVQL---YVVYYGVPALLQMIQIDVSSWN-KIIFIYITYGLNTAAF 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +E  R+ +++VP  Q EA+IA GLT  +  R V+LPQ +R  +P   +  + LL+++SL
Sbjct: 112 QSETFRAAILSVPVTQKEASIACGLTKTQMYRQVILPQVVRVALPAFGTTTIALLQDTSL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A  +G  D+V     I   T   +E  +    ++++LS ++      L  +++  + K
Sbjct: 172 AFTIGVVDVVGKARAIGAVTFHTLEGYVGAAILFITLSFLLERVFTGLERRMSFSKTK 229


>gi|134102703|ref|YP_001108364.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915326|emb|CAM05439.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 220

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 93/232 (40%), Gaps = 18/232 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                +   +    L      +      ++ + VLG+V++L   R SR         L +
Sbjct: 2   KWDWDYAAEIFPMLLGALWTAIQAAVLGYLLALVLGLVIALL--RRSRVLWISVPVGLVV 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++        P +V +   +           F            ++  + L  + A ++
Sbjct: 60  EFV-----RSTPLIVQLFFLF-----------FVLPEVGIQMSPLLTGVVGLGLHYATYV 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ R+G+  VP GQ EAA AL L  R+    V+LPQA+   IP L +  + L K+    
Sbjct: 104 AEVYRAGIDGVPAGQWEAATALNLPTRRVWTDVILPQAIPRSIPALGNYLIALFKDVPQL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           VA+   +  +V   +   T +  E I +   +YL+++++++        +  
Sbjct: 164 VAITVLEPFTVAREVTADTFRPFEAITLAGLLYLAVTLVMSYLGRLAERRFG 215



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 35/92 (38%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +   +     +L         A  G + A ++G ++   R S    ++    + VE  R
Sbjct: 4   DWDYAAEIFPMLLGALWTAIQAAVLGYLLALVLGLVIALLRRSRVLWISVPVGLVVEFVR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           + P +V +FFL+  +  V       +    G+
Sbjct: 64  STPLIVQLFFLFFVLPEVGIQMSPLLTGVVGL 95


>gi|46202162|ref|ZP_00208411.1| COG0765: ABC-type amino acid transport system, permease component
           [Magnetospirillum magnetotacticum MS-1]
          Length = 219

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 13/213 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F  + +  + K+ + +   GIVL      L+R             Y++         L
Sbjct: 14  LPFIQVGLLFSLKLTLVAMSGGIVLGTLL-ALARLSGANWLARAATAYVNVMRSIP---L 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ L + L            + G+ +  E  S  I  + + AAF AEI+R+G+ +VP+G
Sbjct: 70  VLVILWFFLA--------IPLLTGAPMGAE-TSALITFTVFEAAFYAEIMRAGINSVPKG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA ALGL   +    V+LPQA R++ P L +Q + L ++SSL  A+G  DL+     
Sbjct: 121 QTWAAQALGLNRVQTMTSVVLPQAFRAMTPLLLTQTIVLFQDSSLVYAIGAKDLLKAAEI 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
                 + +E+ L    +Y ++   ++  + RL
Sbjct: 181 AGKNYNRPVEMYLFAAGLYFAICFSLSQVVKRL 213



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 34/69 (49%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG + +  L    M    ++GTL+   RLS    +A     YV V R+IP ++VI + + 
Sbjct: 19  VGLLFSLKLTLVAMSGGIVLGTLLALARLSGANWLARAATAYVNVMRSIPLVLVILWFFL 78

Query: 151 SVLSVLPIP 159
           ++  +   P
Sbjct: 79  AIPLLTGAP 87


>gi|330900855|gb|EGH32274.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 277

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 69  GFLQGAALTLFVSVCSIVVSVALGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 128

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 129 IYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIF 188

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 189 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 248

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 249 VLYWIMSIGLELLQSRLERHYG 270


>gi|99080137|ref|YP_612291.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99036417|gb|ABF63029.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 442

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/289 (22%), Positives = 121/289 (41%), Gaps = 18/289 (6%)

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            ++ AG +    +   + +   E+   I  +V     +  V S +      IV      +
Sbjct: 169 VMIAAGFVVGYFVYKAVSQATSELIGLISGVVGAVVWWLFVASFIASVLAGIVPLALESV 228

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +R      L++         S  +GIVL+L      R       K L + +I       
Sbjct: 229 ESRQFGGFMLSILIGVVAIGLSLPIGIVLAL-----GRQSDLLIVKTLCVGFIEFIRGVP 283

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L TL+ +A      F  P           T     M ++I ++ + +A++AE++R GL A
Sbjct: 284 LITLLFVASTLLNIFMPP----------GTNFDIIMRVFIMVTLFASAYMAEVIRGGLAA 333

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD--- 348
           +P+GQ E A +LGL + +A RL+++PQA++  IP + S ++ + K+++L   +G  D   
Sbjct: 334 LPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPGIVSTFIGVFKDTTLVSVIGLFDPLN 393

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L +      N  G   E+      ++      ++ +   L  K+    +
Sbjct: 394 LTNAIRADANWNGLVWELYGFIALLFFVFCFGMSRYSMYLERKLQTGHR 442


>gi|149202379|ref|ZP_01879352.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144477|gb|EDM32508.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 250

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I + +F  G+V+ L A    + +     +   LL I T +I  +P LVLI + Y +  
Sbjct: 36  LQIALGAFGFGLVIGL-AGAYGKLYGGPLLRD--LLAIYTTVIRAVPELVLILILYYVGS 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G       ++    L     A+  E++R  + A+P GQ+EAA A G+ 
Sbjct: 93  DLINQAAIAMGYGRIEISGVVAGIWVLGVVQGAYATEVLRGAIQAIPPGQLEAARAFGMP 152

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M    P L + +L   K+++L   VGF++L          T      
Sbjct: 153 PLMTLRRVTIPAMMSFATPGLANLWLIATKDTALLAIVGFSELTLETRQAAGSTRAYFTF 212

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L    +YL +++       R+  
Sbjct: 213 FLAAGALYLLVTLFSGAIFARIEK 236



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G  N+  +A        +IG     G+L    L+  +  +Y  V R +P LV+
Sbjct: 24  WGANLLRGLANSLQIALGAFGFGLVIGLAGAYGKLYGGPLLRDLLAIYTTVIRAVPELVL 83

Query: 145 IFFLYKSV 152
           I  LY   
Sbjct: 84  ILILYYVG 91


>gi|291569088|dbj|BAI91360.1| putative ABC transporter permease protein [Arthrospira platensis
           NIES-39]
          Length = 405

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 112/255 (43%), Gaps = 18/255 (7%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           +  +   + ++              ++        LT+  +    +  F LG++L+L   
Sbjct: 166 WLPFSWFMLLIISLWLIGGGLGLRGVSTDLWGGLMLTLLMSVISILLCFPLGVLLAL--- 222

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R       + L + YI          L LI + +      P+     F+        
Sbjct: 223 --GRQSDLPVIRGLSIAYIEVIR-----GLPLITILFMGQILLPL-----FLPEGMRPDR 270

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   + L+ +++A++AE VR GL A+PRGQ EAA ALG+       L++LPQA++  IP
Sbjct: 271 ILRAIVGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGINAPLTMALIILPQALKISIP 330

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIA 382
            +  Q+++L ++++L   VG  +L+ +  +I+      G+  E+ L    +Y     +++
Sbjct: 331 SIVGQFISLFQDTTLLAIVGLVELLGISRSILANPRFLGRYAEVYLFVGILYWLFCYLMS 390

Query: 383 LFMNRLNAKIALKEK 397
           L   +L  ++  + +
Sbjct: 391 LASRKLEKQLNTENR 405


>gi|284052501|ref|ZP_06382711.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira platensis str. Paraca]
          Length = 405

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 18/260 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P +  +  +   + ++              ++        LT+  +    +  F LG++L
Sbjct: 161 PQLGKWLPFSWFMLLIISLWLIGGGLGLRGVSTDLWGGLMLTLLMSVISILLCFPLGVLL 220

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +L      R       + L + YI          L LI + +      P+     F+   
Sbjct: 221 AL-----GRQSDLPVIRGLSIAYIEVIR-----GLPLITILFMGQILLPL-----FLPEG 265

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 +   + L+ +++A++AE VR GL A+PRGQ EAA ALG+       L++LPQA+
Sbjct: 266 MRPDRILRAIVGLTMFSSAYLAENVRGGLQAIPRGQYEAAKALGINAPLTMALIILPQAL 325

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSL 377
           +  IP +  Q+++L ++++L   VG  +L+ +  +I+      G+  E+ L    +Y   
Sbjct: 326 KISIPSIVGQFISLFQDTTLLAIVGLVELLGISRSILANPRFLGRYAEVYLFVGILYWLF 385

Query: 378 SIMIALFMNRLNAKIALKEK 397
             +++L   +L  ++  + +
Sbjct: 386 CYLMSLASRKLEKQLNTENR 405


>gi|227823543|ref|YP_002827516.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
 gi|227342545|gb|ACP26763.1| putative amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 221

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 13/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T  K+ +   VLG  L  F   L+R       +A+  +Y+  F   G P LV +   + 
Sbjct: 20  WTTIKLTLICVVLGCSLGFFIG-LARTSRSTVLRAISSVYVEFF--RGTPVLVQL---FW 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F  P++               +S  IAL+ Y  A  +E  R+ L ++   Q++A +AL
Sbjct: 74  IFFCLPLILDVEL-------SNLISGVIALTLYMGAISSETFRASLKSIGPEQLDACVAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL  R     V+LPQA+   IP L S  ++L K S+L  AVG ADL+ VG  I N T + 
Sbjct: 127 GLPRRVQVTSVILPQAVLRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNISNNTARP 186

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           IE++ +   IY  ++  +   +  +  ++
Sbjct: 187 IEVLTVVALIYFLIAFPLTRAVTLVERRV 215



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 38/79 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    +  A+ +G   T  L    ++    +G  +G  R S + ++  I  VYVE F
Sbjct: 3   LDFSIILRFQEALALGLWTTIKLTLICVVLGCSLGFFIGLARTSRSTVLRAISSVYVEFF 62

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           R  P LV +F+++  +  +
Sbjct: 63  RGTPVLVQLFWIFFCLPLI 81


>gi|222080875|ref|YP_002540238.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725554|gb|ACM28643.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 220

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V S +LGI   L           K  +A+ L+ +      G P LVL+   Y    
Sbjct: 23  LQVTVLSLLLGIPFGLLLALGV-LARSKALRAVSLILVEVG--RGAPALVLLQFIY---- 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           F +  IAL+  T A+ +EI+R+ L ++  GQ EAA ALGL 
Sbjct: 76  -------FGLPSVGLTIESFAAAVIALAWNTGAYTSEIIRASLQSIAHGQREAAEALGLN 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R VLLPQ +R  +P L    + + + +SL   +   +LVS    I + T +    
Sbjct: 129 RTDELRFVLLPQGLRVALPALLGFSILIFQGTSLCFTIALPELVSRAYEIGSTTFRYFPA 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +L    +Y  +SI  AL ++ +  + +L  + 
Sbjct: 189 LLCAGALYACISIPAALLVSHVEKRASLYAQH 220


>gi|302186220|ref|ZP_07262893.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 220

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    +   G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWNAREVLWSGFLTSIQCSALAIAAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL            +               F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVLAVFYMVPALGWQI-------------SAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPRGQLEAGKAIGLCFGQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 219


>gi|282864978|ref|ZP_06274032.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282560403|gb|EFB65951.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 295

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 26/254 (10%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +I ++   + +                +    L     T+   A   V S  LG VL++ 
Sbjct: 37  LIAWVLHLLFATDQFTGQKWTPFTYKGIQELLLRGLGNTLKAFAYAAVLSLALGAVLAV- 95

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R    +  + L  L +  F                     PVL    FI  +   
Sbjct: 96  ----GRLSVHRPVRWLSTLLVEFFR------------------AMPVLVMIFFIFVALKV 133

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
               +L   L+ Y  + +AE+ R+G+ +V RGQ EAA ALG+   + T  VL PQA+R++
Sbjct: 134 QPLPALVAGLTLYNGSVLAEVFRTGINSVERGQREAAYALGMRKTQVTTHVLAPQAVRAM 193

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSLSIM 380
           +P + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ + ++
Sbjct: 194 LPTIISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGMCML 253

Query: 381 IALFMNRLNAKIAL 394
           ++ F   +  +   
Sbjct: 254 LSWFATWVARRQRR 267



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 23/149 (15%)

Query: 9   VTRYFSRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           +TR  +    LYD      R  +++  +   L++  +  W ++                 
Sbjct: 1   MTRSTAHATALYDIPGPATRKRHLAYGVASVLVIAALIAWVLH----------------L 44

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L     F   Q   P+T        +L G  NT        + +  +G ++  GRLS ++
Sbjct: 45  LFATDQFT-GQKWTPFTYKG-IQELLLRGLGNTLKAFAYAAVLSLALGAVLAVGRLSVHR 102

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V W+  + VE FR +P LV+IFF++ ++
Sbjct: 103 PVRWLSTLLVEFFRAMPVLVMIFFIFVAL 131


>gi|86149175|ref|ZP_01067407.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85840533|gb|EAQ57790.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 233

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 10/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+  F  +  +++ LF   +S +F  K  + +  LYI        P L+ +   Y 
Sbjct: 18  WLTIKLSFFGIIFSLIIGLFCILMS-YFKIKILENICKLYIEF--SRNTPLLIQLFFLYY 74

Query: 244 ------LHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 +H +  P L         T+ P F    + LS    +++AE +R+G  A+ + Q
Sbjct: 75  ALPKFNIHLEQIPPLDLICLSIEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA ++LG +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++
Sbjct: 135 FEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSL 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + T +  E++ +    YL + + ++  + +   ++
Sbjct: 195 NSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLD 90


>gi|323165238|gb|EFZ51028.1| general L-amino acid transport system permease aapM domain protein
           [Shigella sonnei 53G]
          Length = 168

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 3/144 (2%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+
Sbjct: 22  FMAEGTNIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVI 81

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMF 372
           LPQA++ +IP L +  + L K++SL + +G  DL S            G + E  +    
Sbjct: 82  LPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAAL 141

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           IY      ++ +   L  +     
Sbjct: 142 IYWIFCFSMSRYSQHLEKRFNTGR 165


>gi|309390081|gb|ADO77961.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Halanaerobium praevalens DSM 2228]
          Length = 228

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 14/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L +         ++  +S ++G+V+ L     ++ +  K  +AL  +Y        L   
Sbjct: 11  LPYLLEGTLVTIQLTFWSLLIGVVIGL-PVAFAQAYGNKLVQALVAVYERLARSIPLL-- 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
               +   L+F  P+LG    I        F +  I +   +AA+ ++I R  + +V   
Sbjct: 68  ---LILLLLNFGLPMLGLQISI--------FKAAVIGIGLRSAAYQSQIYRGAIQSVGGS 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA++LG++  KA   ++ PQA+R  +PP+ ++   +LK++SLA  +G  +L+  G  
Sbjct: 117 QMNAALSLGMSKMKAFFYIISPQAIRIALPPVANESAIVLKDTSLAFTIGVVELLRQGEY 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I    + + I L    IY  L+ ++   ++    K  +
Sbjct: 177 FIATANRPMLIYLTIAAIYFVLTTIVNGALSLFEKKYKI 215


>gi|306828837|ref|ZP_07462029.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304429015|gb|EFM32103.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 240

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 1/214 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + + VL  + +LF   L + +  +  ++  L+Y++         L+L      
Sbjct: 18  PITLIIMIVAMVLSFLPALFL-ALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L                  +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQFLKSIGSDLDIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIARVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E   +    Y+ +  +I    + L      KEK
Sbjct: 197 FESYFVIFLQYILICGLIQWGFSLLEKGYVKKEK 230



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 35/101 (34%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    M+ + +    +  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGVPITLIIMIVAMVLSFLPALFLALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
               S+L     SI     +F  +       +         
Sbjct: 74  SLFPSLLNQFLKSIGSDLDIFKLDPLYYAFIIYSLMTVGSL 114


>gi|289678375|ref|ZP_06499265.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 277

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 69  GFLQGAALTLFVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 128

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 129 IYLGLPQLGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIF 188

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 189 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 248

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 249 VLYWIMSIGLELLQSRLERHYG 270


>gi|186473899|ref|YP_001861241.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196231|gb|ACC74195.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 220

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 12/209 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLH 245
               + ++V G+ + L    L        G+ +  +L +   L  G P LV + L Y   
Sbjct: 20  LVTTLGTWVAGVAIGLLVGFLIAVLQLFCGRWVRGMLRVYIELFRGTPFLVQLFLLYYGG 79

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                        G T+ P   +  + L  Y +A+ AE  RSG  ++PRG +EAA  LGL
Sbjct: 80  PSI----------GITLEP-LTAGVLGLGLYGSAYFAEAFRSGFQSIPRGHLEAASCLGL 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +E
Sbjct: 129 TRWQAVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFVE 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +L+    YL+L  + +       A+IA 
Sbjct: 189 TLLMLCVCYLALVELTSRAGMWAEARIAR 217



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 37/81 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G V T     +G+    ++G L+   +L   + V  + RVY+E+FR  P LV +F L
Sbjct: 16  IAAGLVTTLGTWVAGVAIGLLVGFLIAVLQLFCGRWVRGMLRVYIELFRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y    S+    +       G+
Sbjct: 76  YYGGPSIGITLEPLTAGVLGL 96


>gi|331008515|gb|EGH88571.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 220

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 26/241 (10%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FATRLSRHFHE 213
            P      +      L +  L+    +    A   +   + G+VL+   F  RL    + 
Sbjct: 3   QPPGWLQELWTAREVLWSGFLTSIQCSALAIAAGTLIGMLAGLVLTYGGFFARLPIRLYV 62

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              +  P+  +   + + +P L                              F +  I L
Sbjct: 63  DLIRGTPVFVLVLAVFYMVPAL------------------------GWQISAFQAGAIGL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    
Sbjct: 99  TLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILPTWVNSSTE 158

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++A
Sbjct: 159 IVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVA 218

Query: 394 L 394
           L
Sbjct: 219 L 219


>gi|296103388|ref|YP_003613534.1| glutamate/aspartate transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057847|gb|ADF62585.1| glutamate/aspartate transport system permease protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 246

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 18/246 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGILRTVPNRFLSSI 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   +      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVVPELLPENIGMWFKSELDPNVQF-----------FVS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+T
Sbjct: 114 SMMCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L MN +
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMNLV 233

Query: 389 NAKIAL 394
             KI L
Sbjct: 234 ERKIRL 239



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ I  +YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNRFLSSIGTLYVELFRNVPLIVQFFTWYLVVPELLPENIGMW 99


>gi|190891145|ref|YP_001977687.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696424|gb|ACE90509.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 263

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 11/226 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L +       N  I + +  LG V+      L      +     P+ Y     +     
Sbjct: 45  WLPYLASGFLMNVVISLSAMTLGTVVGTIFGIL------QLMPYRPVRYPVVAYVQAFRN 98

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              + L +   +  P   +    G     P+++   I L+   +A++AEI R  ++++P 
Sbjct: 99  APHLVLIFATTYIFPF--EIVVFGNYLPFPDWLKAVIGLAIPASAYVAEITRGAILSIPT 156

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EAA  LG +  +A R ++LPQ +R  +PP  +   ++   +SLA  VG  +L+    
Sbjct: 157 TQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLHAAT 216

Query: 355 TIINQTGQ---AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                  +    I   ++ M  + +L   IA    RL  +     +
Sbjct: 217 DASTAVRRLDFTIIAYIVVMAAFFTLCYPIARLTRRLERRFNAGSR 262



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  GF+    ++ S M   T++GT+ G  +L   + V +    YV+ FRN P LV+
Sbjct: 45  WLPYLASGFLMNVVISLSAMTLGTVVGTIFGILQLMPYRPVRYPVVAYVQAFRNAPHLVL 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           IF                 ++ FG +L         + +   A  +V     G +LS+  
Sbjct: 105 IFATTYIFP--------FEIVVFGNYLPFPDWLKAVIGLAIPASAYVAEITRGAILSIPT 156

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           T+          ++  L +I             + +   +     +            + 
Sbjct: 157 TQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLHAAT 216

Query: 265 EFMSLYIALSCYTAAFI 281
           +  +    L     A+I
Sbjct: 217 DASTAVRRLDFTIIAYI 233


>gi|251796881|ref|YP_003011612.1| polar amino acid ABC transporter inner membrane protein
           [Paenibacillus sp. JDR-2]
 gi|247544507|gb|ACT01526.1| polar amino acid ABC transporter, inner membrane subunit
           [Paenibacillus sp. JDR-2]
          Length = 216

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 15/222 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L F          +   + VL  VL      L    + +      +L +    I 
Sbjct: 7   FSYHNLIFIMKGFGITLWVAFIAIVLSFVLGSITGTL---RYMRIPVVSRILGVIVEFIR 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            LP L+++   Y           F             S  + L+ + AA I+EIVRSGL 
Sbjct: 64  NLPLLLILFFTY-----------FAMPDVGLKLGVMSSAIVGLAVFEAAMISEIVRSGLS 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P GQ+EAA + GLT+ +    ++LPQ +R ++PP+ SQ+++LLK++SLA+ +   +L+
Sbjct: 113 SIPIGQVEAARSSGLTYTQTVWHIVLPQGLRRMVPPIVSQFISLLKDTSLAIVISLPELM 172

Query: 351 SVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                +I Q     + I+ +   +Y +++  ++L   RL  K
Sbjct: 173 HNSKIVIAQNFDYTLPILALVAVLYFTVNYALSLAAKRLENK 214



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 42/81 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ GF  T W+AF  ++ + ++G++ G  R     +V+ I  V VE  RN+P L+++FF 
Sbjct: 15  IMKGFGITLWVAFIAIVLSFVLGSITGTLRYMRIPVVSRILGVIVEFIRNLPLLLILFFT 74

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y ++  V            G+
Sbjct: 75  YFAMPDVGLKLGVMSSAIVGL 95


>gi|224367655|ref|YP_002601818.1| AapM [Desulfobacterium autotrophicum HRM2]
 gi|223690371|gb|ACN13654.1| AapM [Desulfobacterium autotrophicum HRM2]
          Length = 364

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 14/218 (6%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
                +     + VF         +F   L R       KA  ++YI            L
Sbjct: 154 NKWGGLPLTLLLSVFGLTAAYPFGVFL-ALGRQSRMPVIKAFSVVYIELIRGVP-----L 207

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           I+L +      P+L     +       + +   +A+  +TAA+IAE+VR GL  + RGQ 
Sbjct: 208 ISLLFMSSVVFPLL-----LPEGVTLNKILRAQVAIIMFTAAYIAEVVRGGLQGMNRGQY 262

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA +LGL + +  RL++LPQA++ +IPP  S  ++  K++SL V +   DL+    T +
Sbjct: 263 EAAESLGLNYFQTMRLIILPQALKIVIPPSVSILISAFKDTSLVVIIALYDLLKTTQTTL 322

Query: 358 NQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +     G + E  +    IY      ++ +  RL  ++
Sbjct: 323 SHPQWMGFSAEAYIFVALIYFVCCFFMSNYSRRLEREL 360


>gi|315180584|gb|ADT87498.1| amino acid ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 246

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 10/206 (4%)

Query: 202 LFATRLSRHF---HEKTGKALPLLYISTFLIFGLPTLVLIALKY-------QLHFDKPVL 251
           L   R +R     +    + +P L +   + FG   L+  +L               P  
Sbjct: 41  LAPYRWARAIATVYTTIIRGIPDLVLMMLIFFGGQILLNNSLYAINEWLNNWFMSSDPNH 100

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              +++        F++  + +     A++AE  R  ++AV +G++EAA A G+    A 
Sbjct: 101 EWVSYLPDYIDVSPFIAGVLTIGFIFGAYMAETFRGAIMAVDKGELEAAKAYGMGAALAF 160

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R +LLPQ +R  +P   + +L LLK ++L   +G  D+V +       T       +   
Sbjct: 161 RRILLPQMIRHALPGFGNNWLVLLKTTALVSIIGLEDMVRMSSLAAGSTKMPFTFYMAVS 220

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            I+L  + +    +  +  K ++  +
Sbjct: 221 IIFLLFTSVSTGLLKIVERKFSIHTR 246



 Score = 38.4 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  +I  G V T  +A   ++ A ++G L    +L+  +    I  VY  + R IP LV+
Sbjct: 7   YEASIFKGAVLTIEVAVLSLLLAMLLGMLGALAKLAPYRWARAIATVYTTIIRGIPDLVL 66

Query: 145 IFFLYKS--------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           +  ++          + ++    ++  +           L          A +    F+ 
Sbjct: 67  MMLIFFGGQILLNNSLYAINEWLNNWFMSSDPNHEWVSYLPDYIDVSPFIAGVLTIGFIF 126

Query: 197 GIVLS 201
           G  ++
Sbjct: 127 GAYMA 131


>gi|257866172|ref|ZP_05645825.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257872503|ref|ZP_05652156.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257875807|ref|ZP_05655460.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
 gi|257800106|gb|EEV29158.1| amino acid ABC transporter [Enterococcus casseliflavus EC30]
 gi|257806667|gb|EEV35489.1| amino acid ABC transporter [Enterococcus casseliflavus EC10]
 gi|257809973|gb|EEV38793.1| amino acid ABC transporter [Enterococcus casseliflavus EC20]
          Length = 218

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 19/226 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        +    +T++ +    +FSF++G +  +        F +  G          
Sbjct: 7   FSAINIRFLIDGLRVTVEVSILSILFSFIIGGIAGILRFSSIPVFSKVLG---------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I  +  L L+ + +  +F  P +G    I        F S  +AL+ + +A ++EI R
Sbjct: 57  VVIDVIRNLPLLLIIFFTYFALPQIGIRFNI--------FWSAVVALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL +VP+GQMEA ++ GL++ +  R +++PQA ++++P + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNSVPKGQMEAGLSTGLSYVEVLRSIVVPQAFKAMLPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + L    +Y  +   ++L    L  +
Sbjct: 169 PELTHHARIIYGQNTNYVLPMFLAMTVLYFLVCYALSLLSGFLEKR 214



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 39/78 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             ++ G   T  ++   ++ + IIG + G  R S+  + + +  V ++V RN+P L++IF
Sbjct: 13  RFLIDGLRVTVEVSILSILFSFIIGGIAGILRFSSIPVFSKVLGVVIDVIRNLPLLLIIF 72

Query: 147 FLYKSVLSVLPIPDHSIV 164
           F Y ++  +    +    
Sbjct: 73  FTYFALPQIGIRFNIFWS 90


>gi|255322521|ref|ZP_05363666.1| ABC transporter, permease protein [Campylobacter showae RM3277]
 gi|255300429|gb|EET79701.1| ABC transporter, permease protein [Campylobacter showae RM3277]
          Length = 236

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 17/233 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              +   LN         +      + +    +G+ L      L +  + K    L   Y
Sbjct: 21  YYFYPTELNEAQRLAYLKSYGVTLGLTIGGTAIGVTLGFILAFL-KFLNIKILSFLIDEY 79

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   ++ G P ++ + +             F+ +  +T S  F    IAL   ++A++AE
Sbjct: 80  VD--ILRGTPIILQLLI-------------FSVVIFATWSDNFYVALIALGLNSSAYVAE 124

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           IVRSG+ +V +GQMEAA A+GL +  + R V+ PQA ++I+P L +++++L K +S+   
Sbjct: 125 IVRSGINSVDKGQMEAARAMGLNYYVSMREVVFPQATKNILPALANEFISLFKETSVVGY 184

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   D+     ++        E ++    +Y          +  L  ++   +
Sbjct: 185 ISVIDITMQSKSLQAVFYSP-EPVIFTGIVYYVSVKFFTFLVKILERRLNRHD 236


>gi|187919539|ref|YP_001888570.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717977|gb|ACD19200.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 240

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 93/214 (43%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G V        ++    +T + +  +Y + F       LV+    +  
Sbjct: 24  MTVALTLAALAVGAVFGALVAA-AKLSRFRTLRVIGDIYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ     G    P F+   +A+   + A+ AE+ RS ++AV RG++EAA ++G
Sbjct: 82  STLVTSVGQLFGAEGFVGVPPFVVGALAVGMISGAYQAEVYRSAVLAVSRGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   +YL ++ +     NR  A +    K+
Sbjct: 202 TFFVVGGALYLIMTSISNRVFNRAEAHVGRSFKR 235



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+  + T  L  + +    + G LV A +LS  + +  I  +Y  VFR +P L+V
Sbjct: 14  WGGVLLLAALMTVALTLAALAVGAVFGALVAAAKLSRFRTLRVIGDIYTTVFRGVPELLV 73

Query: 145 IFFLYKSV 152
           I+  Y   
Sbjct: 74  IYLFYFGG 81


>gi|306825909|ref|ZP_07459248.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432270|gb|EFM35247.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 240

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 1/214 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + + VL  + +LF   L + +  +  ++  L+Y++         L+L      
Sbjct: 18  PITLIIMIVAMVLSFLPALFL-ALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L                  +I  S  T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLLNQFLKSIGSDFNIFKLDPLYYAFIIYSLMTVGSLSEILRSAILTVDKGQLEAAHAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +A   ++ PQA+RS +P L +  +N++K +SL   +   D+ ++     +   Q 
Sbjct: 137 GLTTTQAYLRIVFPQALRSALPNLANLVINIVKGTSLVFVMTIKDITAIARVEASYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E   +    Y+ +  +I    + L      KEK
Sbjct: 197 FESYFVIFLQYILICGLIQWGFSLLEKGYLKKEK 230



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 4/105 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    M+ + +    +  G++   + V     VY+   R  PP+++I F Y
Sbjct: 14  LKGVPITLIIMIVAMVLSFLPALFLALGQIYKVRGVRSFSLVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
               S+ P   +  +   G   N   L          + + V S 
Sbjct: 74  ----SLFPSLLNQFLKSIGSDFNIFKLDPLYYAFIIYSLMTVGSL 114


>gi|260769233|ref|ZP_05878166.1| arginine ABC transporter permease protein ArtM [Vibrio furnissii
           CIP 102972]
 gi|260614571|gb|EEX39757.1| arginine ABC transporter permease protein ArtM [Vibrio furnissii
           CIP 102972]
          Length = 222

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 3/179 (1%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +T     +      L  G P LV I L Y        + +   +    +S  +    +A
Sbjct: 40  MRTPLLHWVSRAVITLFTGTPLLVQIFLVYYGPGQFEWIRE--SVLWVWLSKPWFCAMVA 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+  TAA+ +++ +    A+P GQ +A  ALG+        VLLP A+R  +P  +++ +
Sbjct: 98  LALNTAAYSSQLFKGAFNAIPDGQWQACRALGMNKIATL-RVLLPYALRRAVPAYSNEVI 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            + K +SLA  +   DL+     I  QT   + +  +    YLS++ ++ L   ++  K
Sbjct: 157 LVFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGVAGLFYLSVNGLLTLVFRQIERK 215


>gi|260463339|ref|ZP_05811540.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259030929|gb|EEW32204.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 385

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P   +   L   VL ++        +     +         +T+  +      S  LG 
Sbjct: 136 VPRKGLNAILLFLVLPIVSFFLLVGGMFGLPHVETSRWGGLLITLSLSFVGIAVSLPLGT 195

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I       L T VL  +   L    P    F+   
Sbjct: 196 VLAL-----GRRSKMPIVKMLCVIFIEAVRGIPLIT-VLFFVSVMLPLFLPAGVTFD--- 246

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 +++   I +S + AA++AE+VR GL A+P+GQ E A +LGL + +   L++LPQ
Sbjct: 247 ------KYLRALIGVSLFAAAYMAEVVRGGLQAIPKGQYEGADSLGLGYWQKMSLIVLPQ 300

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-----EIILIWMFI 373
           A++ +IP + + ++ + K++SL + +   DL+ +     +    A        ++   F+
Sbjct: 301 ALKLVIPGIVNTFIGMFKDTSLVLIISMFDLLGIVKQNFSDANWATAQTAKSGLVFAAFV 360

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +      ++    K+
Sbjct: 361 FWLFCFGMSRYSMYTERRLDTGHKR 385



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +P+   S +      G + T  L+F G+  +  +GT++  GR S   +V  +C +++E  
Sbjct: 165 LPHVETSRWG-----GLLITLSLSFVGIAVSLPLGTVLALGRRSKMPIVKMLCVIFIEAV 219

Query: 137 RNIPPLVVIFFLYKSVLSVLP 157
           R IP + V+FF+   +   LP
Sbjct: 220 RGIPLITVLFFVSVMLPLFLP 240


>gi|224367456|ref|YP_002601619.1| amino acid transport system, permease protein (HisMQ-family
           protein) [Desulfobacterium autotrophicum HRM2]
 gi|223690172|gb|ACN13455.1| amino acid transport system, permease protein (HisMQ-family
           protein) [Desulfobacterium autotrophicum HRM2]
          Length = 225

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 101/230 (43%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + +    L F      T   I + +  +G+VL L               A  ++Y 
Sbjct: 1   MLESLIVIKDALPFLIRGSLTTGAIVLGAMFIGLVLGLTM-------------ACGMVYG 47

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             ++   +   V       +     +     F       P  +++ + L   TAA+ A I
Sbjct: 48  RKWVRRVVGFYVWFFQGVPVLVLLFLFYFGLFNFMGLTFPAVVAVTLVLGMTTAAYQANI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++P GQ +AA ALG+++ +A   ++LPQ +R  IP  ++++  +LK+S+LA  +
Sbjct: 108 FRGAMLSIPSGQFKAANALGMSNVQAIVYIVLPQVLRISIPAWSNEFSIILKDSALAFVI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  ++++    + ++T Q + + +    +Y  L+      +  L  K+ +
Sbjct: 168 GAPEIMARTQFVASRTYQHLPLYITAGLLYFVLTWSGVKGLRALENKVRI 217


>gi|223039606|ref|ZP_03609893.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter rectus RM3267]
 gi|222879177|gb|EEF14271.1| amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter rectus RM3267]
          Length = 236

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 17/245 (6%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           VL  + I    +   +   LN         +      + +    +G+ L      L +  
Sbjct: 9   VLFFVVIVSAGVYYFYPTELNEAQRLAYLKSYGVTLGLTIGGTAIGVTLGFILAFL-KFL 67

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           + K    L   Y+   ++ G P ++ + +             F+ +  +T S  F    I
Sbjct: 68  NIKILSFLIDEYVD--ILRGTPIILQLLI-------------FSVVIFATWSDNFYVALI 112

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL   ++A++AEIVRSG+ +V +GQMEAA A+GL +  + R V+ PQA ++I+P L +++
Sbjct: 113 ALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLNYYVSMREVVFPQATKNILPALANEF 172

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L K +S+   +   D+     ++        E ++    +Y          +  L  +
Sbjct: 173 ISLFKETSVVGYISVIDITMQSKSLQAVFYSP-EPVIFTGIVYYVSVKFFTFLVKILERR 231

Query: 392 IALKE 396
           +   +
Sbjct: 232 LNRHD 236


>gi|84496803|ref|ZP_00995657.1| putative glutamate transporter permease protein [Janibacter sp.
           HTCC2649]
 gi|84383571|gb|EAP99452.1| putative glutamate transporter permease protein [Janibacter sp.
           HTCC2649]
          Length = 295

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 113/257 (43%), Gaps = 11/257 (4%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+++                  +    +        +    +    K    S VL    
Sbjct: 28  LLMLVAAWVVLRKMADANQLQGAMWKPFVTDRAVWRDYLVPGLWGTLKAAAISIVLAGTF 87

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L    + R       + L    +  F    +P L+++   + L+         N +  S
Sbjct: 88  GLIFG-IGRLSTIAPIRWLCGAVVEFF--RSVPVLIMMIFAFGLYAQ-------NSVFAS 137

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            ++P   ++  AL+ Y  A IAE+VRSG+ ++P+GQ EA +A+GLT  +  R + LPQA+
Sbjct: 138 DINP-LAAVITALTLYNGAVIAELVRSGVYSLPKGQGEAGLAVGLTTGQVLRSIQLPQAL 196

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            +++P L  Q++ +LK+S+L   + +++L+S G  + +     +   ++   +++ ++  
Sbjct: 197 TAMLPALIGQFVTVLKDSALGYQITYSELLSGGKILGSNFANTVPAYIVVAIVFILINYS 256

Query: 381 IALFMNRLNAKIALKEK 397
           ++     +  +++ + +
Sbjct: 257 LSRLAIYVEHRLSRRGR 273



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   ++ G   T   A   ++ A   G + G GRLS    + W+C   VE FR++P L++
Sbjct: 62  WRDYLVPGLWGTLKAAAISIVLAGTFGLIFGIGRLSTIAPIRWLCGAVVEFFRSVPVLIM 121

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           + F +               L
Sbjct: 122 MIFAFGLYAQNSVFASDINPL 142


>gi|322388046|ref|ZP_08061652.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
 gi|321141067|gb|EFX36566.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus infantis ATCC 700779]
          Length = 238

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/249 (22%), Positives = 106/249 (42%), Gaps = 19/249 (7%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           L      +  I      + +   +    LS  T+T+   A + +FS  LGI+++      
Sbjct: 9   LMFIYAIIGTIIFRRWNMSYLFEILPSLLSGATMTLQVFALVLLFSIPLGILVAFCLQVH 68

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            +  H        ++ +  +++ G P L+ +   Y +                       
Sbjct: 69  WKPLHY-------MIDVYIWVMRGTPLLLQLIFIYYV-----------LPSIGIRLDRVP 110

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  IA +   AA+ AEI R G+  +P+GQ EAA  L        R ++LPQ  + ++P +
Sbjct: 111 AAIIAFTLNYAAYFAEIFRGGIATIPQGQYEAAKVLKFKPIDTVRYIILPQVTKIVLPSV 170

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ ++L+K++SL  A+G +DL+    T  N+    I + L    IYL +  ++ +   +
Sbjct: 171 FNEVMSLVKDTSLVYALGISDLILASRTAANRDASLIPMFL-AGAIYLLMIGIVTIIAKK 229

Query: 388 LNAKIALKE 396
           L  K +   
Sbjct: 230 LEKKFSYYR 238


>gi|300933044|ref|ZP_07148300.1| glutamate ABC transport system, permease protein [Corynebacterium
           resistens DSM 45100]
          Length = 228

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 10/236 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +       +    L     T+       + S +LG VL+       R       +++   
Sbjct: 1   MNAELWSEMGPDLLPAFWTTVKLTFWSALGSMILGTVLTAM-----RVSPVGILRSIATF 55

Query: 223 YISTFLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           YI+T     L  +VL A L   ++ D  + GQ       T +  F    +A   YT++F+
Sbjct: 56  YINTVRNTPLTLIVLFASLGLYVNLDIALAGQ---GATFTTTNNFRLAVLAFVLYTSSFV 112

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE +RSG+  VP GQ EAA +LGL+  +  R ++ PQA+R  I PL +  + L KN+++A
Sbjct: 113 AESLRSGINTVPFGQAEAARSLGLSFFQNFRHIIFPQALRGAIVPLGNTLIALTKNTTIA 172

Query: 342 VAVGFADLVSVGG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G A+   +   T+ N   Q   I  +    ++ L++ + L       ++A+K 
Sbjct: 173 SVIGVAEASLLMKSTVENHANQVFVIFGVIALGFVILTLPMGLAFGAAGKRLAVKR 228



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L F   + + I+GT++ A R+S   ++  I   Y+   RN P  +++ F 
Sbjct: 13  LLPAFWTTVKLTFWSALGSMILGTVLTAMRVSPVGILRSIATFYINTVRNTPLTLIVLFA 72

Query: 149 YKSVL 153
              + 
Sbjct: 73  SLGLY 77


>gi|300980890|ref|ZP_07175236.1| putative arginine/ornithine transport protein [Escherichia coli MS
           200-1]
 gi|300307703|gb|EFJ62223.1| putative arginine/ornithine transport protein [Escherichia coli MS
           200-1]
          Length = 228

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 88/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L      +    +    +   Y +         L+L+   Y L
Sbjct: 15  VTLELAISSVVLAVIIGLIGAS-GKLSQNRLSGLIFEGYTTLIRGVPGFVLMLLIF-YGL 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 + +   +G   + P  ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 73  QIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T +  
Sbjct: 132 FTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +  +G+LS N+L   I   Y  + R +P  V++  
Sbjct: 8   VILQGALVTLELAISSVVLAVIIGLIGASGKLSQNRLSGLIFEGYTTLIRGVPGFVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|253688086|ref|YP_003017276.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754664|gb|ACT12740.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 222

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 81/174 (46%), Gaps = 3/174 (1%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L  G P LV I L Y        + Q  ++      P ++   +AL+  +AA+  ++
Sbjct: 51  YITLFTGTPLLVQIFLIYYGPGQFTSIQQIPWLWNLLSQP-WLCAMVALALNSAAYTTQL 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
               + A+P GQ ++  ALG+  R+    +LLP A +  +   +++ + + K++SLA  +
Sbjct: 110 FYGAVKAIPAGQWQSCAALGMNQRQTL-RILLPFAFKRALSSYSNEVVLVFKSTSLAYTI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++     +  +T   + +      IYL ++ ++ L M  +  +  + E++
Sbjct: 169 TLMEVMGYSQLMYGRTYDVM-VFGAAGIIYLCVNGLLTLLMRWVERRALVFERR 221


>gi|187477189|ref|YP_785213.1| amino acid ABC transporter permease [Bordetella avium 197N]
 gi|115421775|emb|CAJ48286.1| amino acid ABC transporter, permease protein [Bordetella avium
           197N]
          Length = 222

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 14/228 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              F + +           + T   +      LG +  L    +      +  + + + Y
Sbjct: 6   HSFFNLEIYAEVFPHLLKGLWTTIWLSAIVIPLGALAGLALALVMTQAGPRALRWMVIGY 65

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F  F    LVL+ L Y           F +        +  ++ +A     A++ AE
Sbjct: 66  IDFFRAFPP--LVLLILVY-----------FGWPFLGIELDKLTAVIVAFVLNNASYYAE 112

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R+G+ AVP+GQMEAA + GL   +A   V++PQA+R+++P L    + ++K +++A  
Sbjct: 113 VFRAGIEAVPKGQMEAARSTGLGRGQALGFVVIPQAVRNVLPDLVGNSIEVVKLTTIASV 172

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           V   +L+               ++L    +YL L   +  ++ RL  +
Sbjct: 173 VALPELLRAARDAQALVYSPSPVVL-AALMYLVLLWPLTRWLGRLEHR 219


>gi|307352564|ref|YP_003893615.1| polar amino acid ABC transporter inner membrane subunit
           [Methanoplanus petrolearius DSM 11571]
 gi|307155797|gb|ADN35177.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanoplanus petrolearius DSM 11571]
          Length = 222

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 3/208 (1%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEK--TGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           I + + + G+V+++    +S  F      G A+   Y      F      +      L  
Sbjct: 10  ILLPALLTGLVVTVQLIVVSAPFGLLAGIGVAIGRTYGGRCTSFLCKAFAMFVKGCPLLL 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +L       G T +  F +  I      AA+ +E +R  + +V  GQ+ AA +LG+T
Sbjct: 70  LLFILYFTLPSIGITFT-AFEASVIGFIMCNAAYNSEYIRGAIKSVKEGQIIAARSLGMT 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             ++   ++LPQA+R  IP L+++++ L+K SSLA  +   +L   G  I  +     E 
Sbjct: 129 KYQSIFYIVLPQALRRAIPGLSNEFIYLIKYSSLAFMLTLVELTGAGKLIATKYFTYTET 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +    IYL L  +  +    L  K A+
Sbjct: 189 FIFVGAIYLILVTITTVGAGMLEKKFAV 216


>gi|229593009|ref|YP_002875128.1| putative amino acid ABC transporter membrane protein [Pseudomonas
           fluorescens SBW25]
 gi|229364875|emb|CAY52939.1| putative amino acid BAC transport system, membrane protein
           [Pseudomonas fluorescens SBW25]
          Length = 239

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 2/233 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L    F ++   S           + +    LG+ L L A  L+     +  +     + 
Sbjct: 5   LSLLSFASDGWGSALLAGALVTIALALACVPLGLPLGL-AVALAARSRRRWLRTGATAFS 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F       L L+ + Y        L       G      F++  IA S   AAF +EI
Sbjct: 64  TVFRGL-PELLTLLIIYYGCQIAARKLFAAMGYQGEVAINTFVAAMIAFSLVFAAFSSEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
             S L  +P+GQ+EAA  LGL+     R V+LPQ  R  +P L++ +L+LLK++SL   +
Sbjct: 123 WLSALKTLPKGQLEAAAMLGLSKGTTFRRVVLPQLTRIALPGLSNNWLSLLKDTSLVSTI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              DL+      ++ T + +    +    YL  S +     + L    +  ++
Sbjct: 183 SLVDLMRQTSLAVSVTKEPMLFYTVACLGYLFFSALSGRVFHVLERCFSRHQQ 235



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 30/71 (42%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           +   + +A+L G + T  LA + +     +G  V     S  + +      +  VFR +P
Sbjct: 11  ASDGWGSALLAGALVTIALALACVPLGLPLGLAVALAARSRRRWLRTGATAFSTVFRGLP 70

Query: 141 PLVVIFFLYKS 151
            L+ +  +Y  
Sbjct: 71  ELLTLLIIYYG 81


>gi|319938930|ref|ZP_08013294.1| inner membrane amino-acid ABC transporter permease YecS
           [Streptococcus anginosus 1_2_62CV]
 gi|319811980|gb|EFW08246.1| inner membrane amino-acid ABC transporter permease YecS
           [Streptococcus anginosus 1_2_62CV]
          Length = 213

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T+     + V S  LGIV+S       +  H        L+ I  +++ G P L
Sbjct: 12  LNGALVTLQVFVLVLVLSIPLGIVISFLMQIHFKLLHW-------LINIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA +   AA+ AEI R G++++P G
Sbjct: 65  LQLIFIYYV-----------LPNIGVRLDRLPAAIIAFTLNYAAYFAEIFRGGILSIPAG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  T  +    ++LPQ ++ ++P + ++ + L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFTPFQTIWFIILPQVVKVVLPSVFNEVMTLVKDTSLVYALGVSDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             N+      +  I   IYL L  ++ +   ++  + +
Sbjct: 174 AANRDASLAPMF-IAGAIYLVLIGLVTIVSKQVEKRYS 210


>gi|239635972|ref|ZP_04676989.1| L-cystine transport system permease protein TcyL [Staphylococcus
           warneri L37603]
 gi|239598437|gb|EEQ80917.1| L-cystine transport system permease protein TcyL [Staphylococcus
           warneri L37603]
          Length = 229

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 5/205 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-- 244
             + + +  +GI++      L R           ++Y S F     P +V + + Y    
Sbjct: 19  LAVTLIAMCVGILIG-SIFALIRLHQIPVLSQFVVIYNSFF--RSTPLIVQLFVFYYGVP 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F        +      + P  +   I  S +  A+++E ++ GL++V   Q+EAA  +G
Sbjct: 76  AFILWFNAICHTSMNPDMVPPLLIAAITFSLHATAYLSESIKGGLLSVDTKQIEAAQTVG 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+     R ++ PQA    +P + +Q++ LLK +SLA AV   +++++   + N+  Q +
Sbjct: 136 LSKWNVYRRIVFPQAFGYALPNIENQFIMLLKGTSLAFAVQVTEIMAISTEMANEGYQFV 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
            +  +    Y +L+I+I L  ++L 
Sbjct: 196 PVYTVAAIFYWALAIIIELIFHKLE 220



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  +    M    +IG++    RL    +++    +Y   FR+ P +V +F  Y
Sbjct: 12  LKGVPNTLAVTLIAMCVGILIGSIFALIRLHQIPVLSQFVVIYNSFFRSTPLIVQLFVFY 71

Query: 150 KSVLSVLPIPDH 161
             V + +   + 
Sbjct: 72  YGVPAFILWFNA 83


>gi|261340701|ref|ZP_05968559.1| histidine transport system permease protein HisQ [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317117|gb|EFC56055.1| histidine transport system permease protein HisQ [Enterobacter
           cancerogenus ATCC 35316]
          Length = 228

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L A   ++    K    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGL-AGAGAKLSANKPLALIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNGVTDAIGMDQIDIDPMVAGIITLGFIYGAYFTETFRGAYMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  +      +  L  + ++  K+
Sbjct: 192 YFAVVCGVIYLVFTTASNGVLLLLERRYSVGVKR 225



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG      +LSANK +A I   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELALSSVVLAVLIGLAGAGAKLSANKPLALIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|119510483|ref|ZP_01629616.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Nodularia spumigena
           CCY9414]
 gi|119464905|gb|EAW45809.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Nodularia spumigena
           CCY9414]
          Length = 383

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 18/258 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++  +     +LS   I            ++    +   LT+   +   V SF +G++L+
Sbjct: 141 IIAPWLSLAWLLSFPVILWLLGGGFGLQAVSTNLWNGLLLTLLMASVSIVLSFPIGVLLA 200

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L      R  +    +   + YI   ++ GLP + ++ L          +    F+    
Sbjct: 201 L-----GRTSYLPVVRWFCIFYIE--IVRGLPLIGILFLA--------QVMLPLFLPTEL 245

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                +     L  ++AA++AE +R GL A+PRGQ+EAA ALGL       L++LPQA+R
Sbjct: 246 RLDRLLRGVAGLVLFSAAYMAENLRGGLQAIPRGQVEAAKALGLNTPLVVILIILPQALR 305

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLS 378
           ++IP +  Q++ L K++SL   VG  +L  +  +I+ Q    G+  E+ L    IY    
Sbjct: 306 AVIPAIVGQFIGLFKDTSLLSLVGLVELTGISRSILAQPQFLGRYAEVYLFIGLIYWIFC 365

Query: 379 IMIALFMNRLNAKIALKE 396
            +++L   RL  ++ + +
Sbjct: 366 YLMSLASRRLERQLNISQ 383


>gi|302521615|ref|ZP_07273957.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
 gi|302430510|gb|EFL02326.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sp. SPB78]
          Length = 244

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 13/226 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     L    L      +    +  V   ++   LS     ++   +    + +  + +
Sbjct: 1   MGDFFSLFFDSLDDVGSGLWVTVQATVLGALVAFALSFVFGFMANSTYLLV-RGISRVIV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F   G    V +   + L +  P+L       G  ++P F    +A      A+ +E+
Sbjct: 60  EFF--RGTSLYVQV---FWLFYALPMLT------GYQLNPLF-CGVVAFGINYGAYGSEV 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L AVPR Q EAA+AL  +  +  R V+LPQA   +IP  TS  + LLK + L   +
Sbjct: 108 VRGALNAVPRAQFEAAVALNFSPVQRMRKVILPQAWVQMIPSFTSLLIMLLKATPLLWLI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              D+ +V   + ++TG      L  + IY  L+ ++ L MN L  
Sbjct: 168 TAVDITAVVQQMRDRTGATAPAYLTLLVIYFVLAYLLTLGMNALER 213



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T      G + A  +  + G    S   LV  I RV VE FR     V +F+L+ +
Sbjct: 18  GLWVTVQATVLGALVAFALSFVFGFMANSTYLLVRGISRVIVEFFRGTSLYVQVFWLFYA 77

Query: 152 VL 153
           + 
Sbjct: 78  LP 79


>gi|209517851|ref|ZP_03266685.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501684|gb|EEA01706.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 237

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 89/231 (38%), Gaps = 8/231 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  +F +    +   +T+       V  FVL + L++     +R+           
Sbjct: 6   RQYWQNYLFTDGFNYTGLVITLWLLVASIVLGFVLAVPLAIARASRNRYISGPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++ T++  G P  V + L Y   +    +     +  S          +A +    A+ 
Sbjct: 60  -WLYTYIFRGTPLYVQLLLIYTGLYSLHFVHSHAML-DSFFRNAMNCTLLAFALNECAYA 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    +     G++EAA A G++  K    ++LP A+R  +P  +++ + +L  ++LA
Sbjct: 118 TEIFAGSIRETSHGEIEAAQAYGMSKFKLYTRIILPSALRRALPSYSNEVILMLHATTLA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                 D++ V   + + T    +   I   +Y S+   +     ++  ++
Sbjct: 178 FTATIPDILKVARDVNSATYATFQAYGIAAILYASIVFALIWGFRKMEIRL 228



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G V T WL  + ++   ++   +   R S N+ ++    +Y  +FR  P  V +  +Y  
Sbjct: 22  GLVITLWLLVASIVLGFVLAVPLAIARASRNRYISGPVWLYTYIFRGTPLYVQLLLIYTG 81

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           + S+  +  H+++  F     N  L    L     A       +
Sbjct: 82  LYSLHFVHSHAMLDSFFRNAMNCTLLAFALNECAYATEIFAGSI 125


>gi|209516393|ref|ZP_03265249.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503155|gb|EEA03155.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 220

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 12/209 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQLH 245
               + ++  G+ + L    L        G+ L   L +   L+ G P LV + L Y   
Sbjct: 20  LATTLGTWAAGVAIGLVIGFLIAVLQLFCGRWLRAALRVYIELLRGTPFLVQLFLLYYGG 79

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                        G T+ P   +  + L  Y +A+ AE  RSG  +VPRG +EAA  LGL
Sbjct: 80  PSI----------GLTLEP-MTAGIVGLGLYGSAYFAEAFRSGFQSVPRGHLEAASCLGL 128

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T  +A   +  PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +E
Sbjct: 129 TRWQAIVRIQAPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFVE 188

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +L+    YL+L  + +       A++A 
Sbjct: 189 TLLVLCVCYLALVELTSRAGMWAEARLAR 217



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T     +G+    +IG L+   +L   + +    RVY+E+ R  P LV +F L
Sbjct: 16  IAAGLATTLGTWAAGVAIGLVIGFLIAVLQLFCGRWLRAALRVYIELLRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y    S+    +       G+
Sbjct: 76  YYGGPSIGLTLEPMTAGIVGL 96


>gi|222823696|ref|YP_002575270.1| ABC transporter, His/Glu/Gln/Arg/opine family (permease protein)
           [Campylobacter lari RM2100]
 gi|222538918|gb|ACM64019.1| conserved hypothetical protein, ABC transporter,
           His/Glu/Gln/Arg/opine family (permease protein)
           [Campylobacter lari RM2100]
          Length = 215

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 14/216 (6%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                      K+ ++      ++ LF   +S +F       +  +YI        P L+
Sbjct: 11  PMFIQASWLTLKLAIYGVFFSFLVGLFCMGVS-YFKFSFLNTICKIYIEF--SRNTPLLI 67

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            +   Y        L +F           F    I LS    +++AE +R+G+ AV + Q
Sbjct: 68  QLFFLYY------ALPEFG-----IHLSSFACAVIGLSFLGGSYMAESLRAGMEAVKKQQ 116

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+ ++LGL+  +  R +++PQA+   +P +++  + LLK +S+   +  ADLV V   +
Sbjct: 117 YESGLSLGLSKWQNFRYIIMPQALGIAMPSISANIIFLLKETSVVSIIALADLVYVAKDL 176

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I    ++ E +   +  YL L + ++L +NR+  ++
Sbjct: 177 IGLYYKSNEALFALVLCYLILILPLSLVLNRIEKRL 212



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +     T  LA  G+  + ++G             +  IC++Y+E  RN P L+ +FFL
Sbjct: 13  FIQASWLTLKLAIYGVFFSFLVGLFCMGVSYFKFSFLNTICKIYIEFSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y ++      
Sbjct: 73  YYALPEFGIH 82


>gi|330831727|ref|YP_004394679.1| putative amino-acid ABC transporter permease YckJ [Aeromonas
           veronii B565]
 gi|328806863|gb|AEB52062.1| Probable amino-acid ABC transporter permease protein YckJ
           [Aeromonas veronii B565]
          Length = 222

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 10/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R F       L +LYIS F   G P LV + L   L++  P L              F
Sbjct: 43  IVRVFRVPAIHWLAMLYISFF--RGTPLLVQLFL---LYYGLPQLFPIF-----VGMDAF 92

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L+ + AA++AE +R+ ++ + + QMEAA+++G++  +A + ++LPQA R   P 
Sbjct: 93  TAAIVGLTLHFAAYMAESIRAAILGIHKSQMEAALSIGMSRYQAMQRIILPQAARIATPS 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L + +++++K++SLA  +G A+++       + + +  E  +    IY  + I      +
Sbjct: 153 LMNYFIDMIKSTSLAFTLGVAEIMGKAQMEASSSFKFFESFMAVALIYWVVVIFFTRLQH 212

Query: 387 RLNAKIAL 394
            L  ++  
Sbjct: 213 LLEIRLNR 220


>gi|167841038|ref|ZP_02467722.1| histidine transport system permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 237

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 87/223 (39%), Gaps = 4/223 (1%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFL 228
           +  N   +           +++    +GI   L     ++R    K       LY  T++
Sbjct: 8   YWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKRKWLAGAVWLY--TYV 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + L Y   +    +     +  +          +A +  T A+  EI    
Sbjct: 66  FRGTPLYVQLLLCYTGLYSLQAVRGTPML-DAFFRDGMNCTLLAFTLNTCAYTTEIFAGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +   G++EAA A G++     R ++LP A+R  +P  +++ + +L  +++A      D
Sbjct: 125 IKSTSYGEIEAARAYGMSTFTLYRRIVLPSALRRALPLYSNEVILMLHATTVAFTATVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++ +   + + T  +     I   +YL++S  +     R   +
Sbjct: 185 ILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERR 227



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 38/124 (30%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A    +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGLAITMWLLVVSIGIGFCLSVPLAVARVSKRKWLAGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     N  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|148925846|ref|ZP_01809533.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145844832|gb|EDK21936.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 233

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 102/216 (47%), Gaps = 10/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+  F  +  +++ LF   +S +F  K  + +  LYI        P L+ +   Y 
Sbjct: 18  WLTIKLSFFGIIFSLIIGLFCILMS-YFKIKILENICKLYIEF--SRNTPLLIQLFFLYY 74

Query: 244 ------LHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 +H +  P L         T+ P F  + + LS    +++AE +R+G  A+ + Q
Sbjct: 75  ALPKFNIHLEQIPPLDLICLSVEETLRPSFACVIVGLSFLGGSYMAESLRAGFEAIRKQQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA ++LG +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++
Sbjct: 135 FEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSL 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + T +  E++ +    YL + + ++  + +   ++
Sbjct: 195 NSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLD 90


>gi|24112047|ref|NP_706557.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 301]
 gi|30062158|ref|NP_836329.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 2457T]
 gi|110804697|ref|YP_688217.1| glutamate/aspartate transport system permease [Shigella flexneri 5
           str. 8401]
 gi|24050871|gb|AAN42264.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 301]
 gi|30040403|gb|AAP16135.1| glutamate/aspartate transport system permease [Shigella flexneri 2a
           str. 2457T]
 gi|110614245|gb|ABF02912.1| glutamate/aspartate transport system permease [Shigella flexneri 5
           str. 8401]
 gi|281600011|gb|ADA72995.1| Glutamate/aspartate transport system permease [Shigella flexneri
           2002017]
 gi|313649700|gb|EFS14124.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           flexneri 2a str. 2457T]
          Length = 246

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWVWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRL 239



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWVWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|86153641|ref|ZP_01071844.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|85842602|gb|EAQ59814.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni HB93-13]
          Length = 233

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 101/216 (46%), Gaps = 10/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+  F  +  +++ LF   +S +F  K  + +  LYI        P L+ +   Y 
Sbjct: 18  WLTIKLSFFGIIFSLIIGLFCILMS-YFKIKILENICKLYIEF--SRNTPLLIQLFFLYY 74

Query: 244 ------LHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 +H +  P L         T+ P F    + LS    +++AE +R+G  A+ + Q
Sbjct: 75  ALPKFNIHLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA ++LG +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++
Sbjct: 135 FEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSL 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + T +  E++ +    YL + + ++  + +   ++
Sbjct: 195 NSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLN 90


>gi|74311190|ref|YP_309609.1| glutamate/aspartate transport system permease [Shigella sonnei
           Ss046]
 gi|170681365|ref|YP_001742771.1| glutamate/aspartate ABC transporter permease GltJ [Escherichia coli
           SMS-3-5]
 gi|193063371|ref|ZP_03044461.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E22]
 gi|193069039|ref|ZP_03049997.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E110019]
 gi|194429737|ref|ZP_03062253.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli B171]
 gi|218553196|ref|YP_002386109.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli IAI1]
 gi|218694094|ref|YP_002401761.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli 55989]
 gi|256020606|ref|ZP_05434471.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily protein [Shigella sp. D9]
 gi|260842880|ref|YP_003220658.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O103:H2 str. 12009]
 gi|260853905|ref|YP_003227796.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O26:H11 str. 11368]
 gi|260866802|ref|YP_003233204.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O111:H- str. 11128]
 gi|293413950|ref|ZP_06656599.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B185]
 gi|293418766|ref|ZP_06661201.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B088]
 gi|300817826|ref|ZP_07098040.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|300823029|ref|ZP_07103163.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|307312630|ref|ZP_07592262.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|331667008|ref|ZP_08367882.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA271]
 gi|331676314|ref|ZP_08377026.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H591]
 gi|73854667|gb|AAZ87374.1| glutamate/aspartate transport system permease [Shigella sonnei
           Ss046]
 gi|170519083|gb|ACB17261.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli SMS-3-5]
 gi|192930955|gb|EDV83559.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E22]
 gi|192957583|gb|EDV88028.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E110019]
 gi|194412218|gb|EDX28524.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli B171]
 gi|218350826|emb|CAU96520.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli 55989]
 gi|218359964|emb|CAQ97508.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli IAI1]
 gi|257752554|dbj|BAI24056.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O26:H11 str. 11368]
 gi|257758027|dbj|BAI29524.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O103:H2 str. 12009]
 gi|257763158|dbj|BAI34653.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli O111:H- str. 11128]
 gi|291325294|gb|EFE64709.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B088]
 gi|291434008|gb|EFF06981.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B185]
 gi|300524378|gb|EFK45447.1| ABC transporter, permease protein [Escherichia coli MS 119-7]
 gi|300529523|gb|EFK50585.1| ABC transporter, permease protein [Escherichia coli MS 107-1]
 gi|306907332|gb|EFN37837.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli W]
 gi|315059909|gb|ADT74236.1| glutamate and aspartate transporter subunit [Escherichia coli W]
 gi|320198221|gb|EFW72825.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli EC4100B]
 gi|323153621|gb|EFZ39869.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli EPECa14]
 gi|323158892|gb|EFZ44903.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli E128010]
 gi|323179869|gb|EFZ65426.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1180]
 gi|323184991|gb|EFZ70358.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1357]
 gi|323379527|gb|ADX51795.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli KO11]
 gi|323945129|gb|EGB41191.1| inner membrane transport system [Escherichia coli H120]
 gi|324116728|gb|EGC10643.1| inner membrane transport system [Escherichia coli E1167]
 gi|331066232|gb|EGI38116.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA271]
 gi|331076372|gb|EGI47654.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H591]
 gi|332104147|gb|EGJ07493.1| glutamate/aspartate transport system permease [Shigella sp. D9]
          Length = 246

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMTLVERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|309779617|ref|ZP_07674376.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308921558|gb|EFP67196.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 258

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 11/209 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            N  I + +  LG ++ L    L      +  + L  +Y+  F       LV     Y +
Sbjct: 53  INVGISLLAVGLGTLVGLAIGAL-HLSPVRGLRHLAGVYVIAFRNAPWLVLV-----YGI 106

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P   +    G     P+++ +  AL+   +A +AEI R  + ++P+ Q EAA +L 
Sbjct: 107 AYAVPF--EIVVRGHVIPFPDWLKVTFALALPASAHVAEIFRGAVQSIPQTQWEAAASLA 164

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTG 361
            T R     ++LPQ ++ ++P   + Y  +   ++LA  VG  DL+         +N+T 
Sbjct: 165 FTRRDILWRIVLPQCVQRMLPSWMNLYAVITMGTALASLVGVHDLLDTAQIASNTVNRTP 224

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +      + ++      I+    R+  
Sbjct: 225 FTVLTYFTVLALFFLYCYPISRLTRRMER 253



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 42/85 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++ A+L G      ++   +   T++G  +GA  LS  + +  +  VYV  FRN P LV+
Sbjct: 43  WSPALLRGLGINVGISLLAVGLGTLVGLAIGALHLSPVRGLRHLAGVYVIAFRNAPWLVL 102

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++ +  +V   + +  H I  P  +
Sbjct: 103 VYGIAYAVPFEIVVRGHVIPFPDWL 127


>gi|121608198|ref|YP_996005.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552838|gb|ABM56987.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 222

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 17/233 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
                  ++N  L     ++    +  +   +LG +L+L      R   +K  +    +Y
Sbjct: 7   SFYNQELISNFVLKGLYFSLQLTLEAAIGGILLGTLLALM-----RLSGKKWLEMPAAIY 61

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++     G+ ++ L+ +        P +               +S  I    + AA+ +E
Sbjct: 62  VN-----GMRSIPLVMVILWFFLLMPAIIGRPIGAE-------VSAVITFIAFEAAYFSE 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ A+PRGQ+ A  ALG+T+ +  +LVLLPQA+R+++P L +Q + L +++SL  A
Sbjct: 110 IMRAGIAAIPRGQVHAGQALGMTYAQNMQLVLLPQALRNMLPVLLTQIIILFQDTSLVYA 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G  DL+          G+ IE  L    +Y +L   ++  + RL+ KIA+  
Sbjct: 170 IGAYDLLKGFELAGKNFGRPIEAYLAATVLYFALCFTLSWLVKRLHRKIAIIR 222



 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 42/100 (42%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   +  L     I   ++GTL+   RLS  K +     +YV   R+IP ++VI + +
Sbjct: 19  LKGLYFSLQLTLEAAIGGILLGTLLALMRLSGKKWLEMPAAIYVNGMRSIPLVMVILWFF 78

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             + +++  P  + V     F+      F  +     A I
Sbjct: 79  LLMPAIIGRPIGAEVSAVITFIAFEAAYFSEIMRAGIAAI 118


>gi|223984172|ref|ZP_03634322.1| hypothetical protein HOLDEFILI_01615 [Holdemania filiformis DSM
           12042]
 gi|223963868|gb|EEF68230.1| hypothetical protein HOLDEFILI_01615 [Holdemania filiformis DSM
           12042]
          Length = 210

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 13/220 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLP 233
            L     ++   A + +  F + ++LSL    L +   + +G+AL PL      L+ G P
Sbjct: 1   MLKQILPSLLAGAGVTLQVFFVTLMLSLPLACLLQALQQFSGRALKPLFRGYITLMRGTP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ +   +   F  P L       G T+S E MS+YIA +    A+  EI+R  L AV 
Sbjct: 61  LLLQLMFIF---FGMPYL-------GLTLSRE-MSIYIAFTLNYTAYFIEILRGALSAVD 109

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EA   LG + R     + LPQA+R+ +P + ++ LNL+K++SL   +G ++L+  G
Sbjct: 110 PGQAEAGKMLGFSRRYIYFRIQLPQALRTAMPAIGNEVLNLVKDTSLIYVLGASELLKAG 169

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + +N T       +    +YL++    +  + R+  +I+
Sbjct: 170 RSAVN-TYATALPFVFVGILYLAMCGGFSWILGRIEKRIS 208


>gi|309791170|ref|ZP_07685702.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
 gi|308226732|gb|EFO80428.1| polar amino acid ABC transporter, inner membrane subunit
           [Oscillochloris trichoides DG6]
          Length = 393

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 28/266 (10%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP L+    LY   + ++       ++               LTM  ++   + SF LG+
Sbjct: 149 IPLLISWVLLYPIAILIIRGGVGLPIVE------TNLWGGLLLTMILSSSGIILSFPLGV 202

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L+L      R  +    K   + YI       L T++ +A           L    F+ 
Sbjct: 203 LLAL-----GRRSNLPIIKGFCVAYIELIRGVPLVTVLFMA----------QLMLPLFLP 247

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                   +   +A++ ++AA++AE VR GL ++PRGQ EAA ALGL   + T L+ LPQ
Sbjct: 248 DQVRIDSVLRAMVAVTLFSAAYLAENVRGGLQSLPRGQTEAARALGLNPVQTTLLITLPQ 307

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-------GQAIEIILIWM 371
           A+R++IP L  Q+++L K++SL V VG  DL+ +  TI +Q        G   E +L+  
Sbjct: 308 ALRAVIPVLVGQFISLFKDTSLVVIVGLIDLLGIARTIYSQAEWKDFTGGVWRETLLVVA 367

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEK 397
            IY   S  ++    ++  K+++  +
Sbjct: 368 LIYWIFSFTMSRTSKKIEEKMSVGYR 393


>gi|170781633|ref|YP_001709965.1| putative glutamate permease [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156201|emb|CAQ01343.1| putative glutamate permease [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 215

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 19/223 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+       +F+  LG+V++       R     + +A   +Y+          
Sbjct: 11  FLRGFGGTLRLLLTTVLFALPLGVVIAAM-----RISPVASLRATSTIYVELLRNTP--- 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+L+   + +               S   P   +  +AL+ YTA F AE +RSG+ +VP 
Sbjct: 63  LLLVFTFFSV----------VITSISGALPFMTAAVLALTLYTAPFFAEAIRSGINSVPV 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++GLT  +    V+LPQA+R++IPPL +  + L KN+S+A A    +L +VG 
Sbjct: 113 GQAEAARSIGLTFSQTLGSVILPQAVRTVIPPLINVVIALTKNTSIAGAYFIYELFNVGR 172

Query: 355 TIINQTGQAIE-IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + N  G A+  + +   F YL +++ +    + L  ++A+  
Sbjct: 173 DVANANGDAVVWVFVGVAFFYLIITVPLGQLADHLEKRVAVSR 215



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L GF  T  L  + ++ A  +G ++ A R+S    +     +YVE+ RN P L+V 
Sbjct: 8   LDVFLRGFGGTLRLLLTTVLFALPLGVVIAAMRISPVASLRATSTIYVELLRNTPLLLVF 67

Query: 146 FFLYKSVLSV 155
            F    + S+
Sbjct: 68  TFFSVVITSI 77


>gi|313498370|gb|ADR59736.1| Polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 219

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 5/203 (2%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G  LSL  T +S       G    L   S   +     L LI ++        +L QF +
Sbjct: 17  GYWLSLQVTAVSLLIGIPLGLLFALWVGSKKRL--NRALALIFIEVGRGGPVLILLQFFY 74

Query: 257 IGGSTVS---PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
            G  T       F +  +AL+  T ++ +EI+R GL AVP+GQ EAA  LGL+   A R+
Sbjct: 75  FGLPTTGLTLSSFTASILALAWSTGSYTSEIIRGGLGAVPQGQREAARTLGLSSWDALRI 134

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ +R  +PPL    L +L+ +SL   +   +LV V   I + T + + ++L+   +
Sbjct: 135 IILPQGLRIALPPLLGFSLVILQTTSLCFTIALPELVGVANDIGSATFEYMSVLLLTGLM 194

Query: 374 YLSLSIMIALFMNRLNAKIALKE 396
           Y ++ +   +F+ R    ++  E
Sbjct: 195 YAAVCVPATIFVGRYEKHLSRYE 217


>gi|15889179|ref|NP_354860.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15156998|gb|AAK87645.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 267

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 102/214 (47%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G+++  F   L+    EK+ +    +Y + F       L L  + Y +
Sbjct: 55  VTISLALATLPVGLLIG-FLIALAAQSEEKSLRLAAGIYTTIFRGL-PELLTLFIVYYGV 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +  +    G      F++  +ALS   +++ +E++ S   A+P+GQ EA  ALG
Sbjct: 113 QMLLQSVAGYVGFSGPVEINAFVAGMLALSVVFSSYASEVLLSAFKAIPKGQYEAGDALG 172

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +   L+++PQ +R  +P +T+ ++ LLK++S    +G AD++   G     + +A 
Sbjct: 173 LSRSRTMVLIIIPQLVRIALPGMTNLWVILLKDTSYVSIIGLADIIRQTGIAARVSKEAF 232

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I   +YL L+++ ++ +  ++      E +
Sbjct: 233 FFYGIACLLYLILALISSVGIGFIDRWSRKSEAR 266



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 72/197 (36%), Gaps = 8/197 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G   T  LA + +    +IG L+     S  K +     +Y  +FR +P L+ 
Sbjct: 45  WGDEIAFGVKVTISLALATLPVGLLIGFLIALAAQSEEKSLRLAAGIYTTIFRGLPELLT 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  V  +L      +     + +N              A   VFS     VL L A
Sbjct: 105 LFIVYYGVQMLLQSVAGYVGFSGPVEIN-------AFVAGMLALSVVFSSYASEVL-LSA 156

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            +       + G AL L    T ++  +P LV IAL    +    +L   +++    ++ 
Sbjct: 157 FKAIPKGQYEAGDALGLSRSRTMVLIIIPQLVRIALPGMTNLWVILLKDTSYVSIIGLAD 216

Query: 265 EFMSLYIALSCYTAAFI 281
                 IA      AF 
Sbjct: 217 IIRQTGIAARVSKEAFF 233


>gi|23098013|ref|NP_691479.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
 gi|22776237|dbj|BAC12514.1| amino acid ABC transporter permease [Oceanobacillus iheyensis
           HTE831]
          Length = 234

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 93/232 (40%), Gaps = 15/232 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                 M      L    +T+      F+F+ + G     F    +R    +    +   
Sbjct: 4   WSWETFMDALPFVLQGLGITVGLTISCFLFAMIFG-----FFWTFARRVKNRPFNFIVTW 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +    I   P LV +   Y      PV+       G T+ P F+   + L  + + +I 
Sbjct: 59  TMEF--IRSTPPLVQLFFIYFAFPSVPVI-------GMTLHP-FVCAVLGLGIHFSTYIG 108

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI RSG+ +V +GQ EA+ +L  +     R ++LPQA+   IP L + ++ + K   +  
Sbjct: 109 EIYRSGIESVEKGQWEASTSLNFSTLDKWRKIILPQAIPPTIPMLGNYFIIMFKEVPITS 168

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +    ++ +  T   Q    +E I I   I+L LS   A+ + +L  K   
Sbjct: 169 TISVGGIMLMARTYGAQNWSYLEPITIVGIIFLLLSYPSAVLIKKLELKYNR 220



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 30/68 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  L  S  + A I G      R   N+   +I    +E  R+ PPLV +FF+Y
Sbjct: 17  LQGLGITVGLTISCFLFAMIFGFFWTFARRVKNRPFNFIVTWTMEFIRSTPPLVQLFFIY 76

Query: 150 KSVLSVLP 157
            +  SV  
Sbjct: 77  FAFPSVPV 84


>gi|325265330|ref|ZP_08132055.1| amino acid ABC transporter, permease protein [Clostridium sp. D5]
 gi|324029509|gb|EGB90799.1| amino acid ABC transporter, permease protein [Clostridium sp. D5]
          Length = 218

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 102/212 (48%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 +FS  LG++++       R    K  + +  +YIS  ++ G P ++ + + Y  
Sbjct: 22  IFFSTVLFSLPLGLLVAF-----GRMSRIKVIQWIAKVYIS--IMRGTPLMLQLMVVYFG 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +       + F    T S    ++ IA +   AA+ AEI R G+ ++P GQ EAA  LG
Sbjct: 75  PY-------YIFGIRITASYRLTAVLIAFAINYAAYFAEIYRGGIESMPVGQYEAAKLLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
               +    ++ PQ ++ I+P +T++ + L+K++SLA A+ +A++ +    I   +  +I
Sbjct: 128 YNRVQTFFRIIFPQVIKRILPSVTNEVITLVKDTSLAFAIAYAEMFTTAKQIAA-SQTSI 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++     Y   ++++A+ M  +  K+    
Sbjct: 187 VPLVAAGIFYYLFNLIVAVVMEFIEKKLNYYR 218



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  + FS ++ +  +G LV  GR+S  K++ WI +VY+ + R  P ++ +  +Y  
Sbjct: 15  GMIGTIGIFFSTVLFSLPLGLLVAFGRMSRIKVIQWIAKVYISIMRGTPLMLQLMVVYFG 74


>gi|307262179|ref|ZP_07543830.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306868156|gb|EFM99981.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 219

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R +    +T+  +    + S V G+++++        +  K    L   
Sbjct: 1   MNWSYVVNAIPRFIDAAIITLQLSFWGILLSLVFGLLIAIVT-----AYQVKPFYGLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 56  YIE--LSRNTPLLIQLFFLYY-----------GLPKIGIKWDGFTCGIIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           AV  A+L+ V   II    +  E + +    YL + + I+L       K
Sbjct: 163 AVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFENK 211



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F G++ + + G L+        K    + R Y+E+ RN P L+ +FFL
Sbjct: 13  FIDAAIITLQLSFWGILLSLVFGLLIAIVTAYQVKPFYGLARGYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YYGLPKIGIK 82


>gi|257878165|ref|ZP_05657818.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257881051|ref|ZP_05660704.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257884712|ref|ZP_05664365.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257889636|ref|ZP_05669289.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257892424|ref|ZP_05672077.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260559212|ref|ZP_05831398.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|261207745|ref|ZP_05922430.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289565820|ref|ZP_06446262.1| glutamine ABC transporter permease glnP [Enterococcus faecium
           D344SRF]
 gi|293563128|ref|ZP_06677593.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1162]
 gi|294614006|ref|ZP_06693936.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1636]
 gi|294617099|ref|ZP_06696765.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1679]
 gi|294623310|ref|ZP_06702172.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium U0317]
 gi|314939891|ref|ZP_07847097.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314943738|ref|ZP_07850477.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314949694|ref|ZP_07853012.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314953240|ref|ZP_07856179.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314993680|ref|ZP_07859028.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314997403|ref|ZP_07862354.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|257812393|gb|EEV41151.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257816709|gb|EEV44037.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|257820550|gb|EEV47698.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257825996|gb|EEV52622.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257828803|gb|EEV55410.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260074969|gb|EEW63285.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|260078128|gb|EEW65834.1| amino acid ABC transporter [Enterococcus faecium TC 6]
 gi|289162363|gb|EFD10221.1| glutamine ABC transporter permease glnP [Enterococcus faecium
           D344SRF]
 gi|291593113|gb|EFF24692.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1636]
 gi|291596636|gb|EFF27863.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1679]
 gi|291597278|gb|EFF28467.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium U0317]
 gi|291604906|gb|EFF34375.1| glutamate/aspartate transport system permease protein GltK
           [Enterococcus faecium E1162]
 gi|313588538|gb|EFR67383.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313591854|gb|EFR70699.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313594706|gb|EFR73551.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597601|gb|EFR76446.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313640854|gb|EFS05434.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313643952|gb|EFS08532.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 218

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 19/226 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T++ +    +FSF++G +  +        F +  G          
Sbjct: 7   FSWMNIRFLLEGLKVTVEVSLFSIIFSFLIGGLTGVIRFANIPFFSKILG---------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I  +  L L+ + +  +F  P +              F S   AL+ + +A ++EI R
Sbjct: 57  VVIDIIRNLPLLLIIFFTYFALPQI--------GIQMNIFWSAVAALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL AVP+GQMEA ++ GLT+ ++ R ++LPQA +S+IP + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNAVPKGQMEAGLSTGLTYVESMRTIVLPQAFKSMIPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + +I   +Y  +   ++L    L  +
Sbjct: 169 PELSHQARIIYGQNTNYVLPMFIIMTLMYFVVCYALSLLSGYLEKR 214



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 42/106 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +I + +IG L G  R +     + I  V +++ RN+P 
Sbjct: 8   SWMNIRFLLEGLKVTVEVSLFSIIFSFLIGGLTGVIRFANIPFFSKILGVVIDIIRNLPL 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L++IFF Y ++  +    +        + +    +         NA
Sbjct: 68  LLIIFFTYFALPQIGIQMNIFWSAVAALTIFESAMLSEIFRAGLNA 113


>gi|163793104|ref|ZP_02187080.1| amino acid ABC transporter, permease protein [alpha proteobacterium
           BAL199]
 gi|159181750|gb|EDP66262.1| amino acid ABC transporter, permease protein [alpha proteobacterium
           BAL199]
          Length = 449

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 16/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYI 224
            +F +   L+    T      + +    +GI  +L       L R       +     +I
Sbjct: 222 FIFQSTWNLAPVQTTNWGGLFLTLVISGIGISTALPSGVILALGRRSKMPVIRVFCTAFI 281

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F    L T++ +A          V     F+  +    + + + +A+  + AA++AEI
Sbjct: 282 ELFRSVPLITILFMA----------VTMMPLFLPVTLNPDKLVLVIVAVCIFAAAYMAEI 331

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL A+  GQ EAA A+GL + K   L+++PQA++ +IP +   ++ LLK+++L   +
Sbjct: 332 VRGGLQAINTGQYEAARAVGLNYWKMMTLIVMPQALKLMIPNIVGNFIGLLKDTTLVSII 391

Query: 345 GFADLV---SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G  D++      G      G   E +L   F++  +   ++ +   L  
Sbjct: 392 GLYDILLMVRASGQDPKWLGMHTEPMLFAAFVFFVICFAMSKYSQHLER 440


>gi|307250982|ref|ZP_07532908.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306857010|gb|EFM89140.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 219

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R +    +T+  +    + S + G+++++        +  K    L   
Sbjct: 1   MNWSYVVNAIPRFIDAAIITLQLSFWGILLSLIFGLLIAVVT-----AYQVKPFYGLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 56  YIE--LSRNTPLLIQLFFLYY-----------GLPKIGIKWDGFTCGIIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           AV  A+L+ V   II    +  E + +    YL + + I+L       K
Sbjct: 163 AVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFENK 211



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F G++ + I G L+        K    + R Y+E+ RN P L+ +FFL
Sbjct: 13  FIDAAIITLQLSFWGILLSLIFGLLIAVVTAYQVKPFYGLARGYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YYGLPKIGIK 82


>gi|170695842|ref|ZP_02886983.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139266|gb|EDT07453.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 220

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T A   V   ++G V+++      + F  +  +AL  +YI  F   G P LV + L Y  
Sbjct: 26  TWAAGVVIGMLIGFVIAVL-----QLFCGRWVRALLRVYIELF--RGTPFLVQLFLLYYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G T+ P   +  + L  Y +A+ AE  RSG  +VP G +EAA  LG
Sbjct: 79  GPSF----------GLTLEP-MTAGVLGLGLYGSAYFAEAFRSGFESVPPGHLEAASCLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +
Sbjct: 128 LTRMQAVLRIQMPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFV 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E +L+    YL+L  + +       A+IA 
Sbjct: 188 ETLLMLCVCYLALVELTSRAGMWAEARIAR 217



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 36/81 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T     +G++   +IG ++   +L   + V  + RVY+E+FR  P LV +F L
Sbjct: 16  IAAGLATTLGTWAAGVVIGMLIGFVIAVLQLFCGRWVRALLRVYIELFRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y    S     +       G+
Sbjct: 76  YYGGPSFGLTLEPMTAGVLGL 96


>gi|82543097|ref|YP_407044.1| glutamate-aspartate transport system permease [Shigella boydii
           Sb227]
 gi|187733686|ref|YP_001879337.1| glutamate/aspartate ABC transporter permease GltJ [Shigella boydii
           CDC 3083-94]
 gi|81244508|gb|ABB65216.1| glutamate-aspartate transport system permease [Shigella boydii
           Sb227]
 gi|187430678|gb|ACD09952.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Shigella boydii CDC 3083-94]
 gi|320185367|gb|EFW60137.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella flexneri CDC 796-83]
 gi|332097750|gb|EGJ02724.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           boydii 3594-74]
          Length = 246

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAIIMLVMTLVERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|290473278|ref|YP_003466144.1| putative high-affinity glutamine ABC transporter membrane protein
           [Xenorhabdus bovienii SS-2004]
 gi|289172577|emb|CBJ79346.1| putative high-affinity glutamine transport protein (ABC
           superfamily, membrane) [Xenorhabdus bovienii SS-2004]
          Length = 249

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 106/236 (44%), Gaps = 9/236 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +   N          D   +    + V+ I+  + +  L                 
Sbjct: 1   MDFTVITENWRYLLLGTFPDGPLEGAALTLVISIMAGVISIVLGTVAGVALAMLRGFWVN 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               I G    + +I L +  +F  PV+            PE  ++  AL+  T+A++A 
Sbjct: 61  LLAAILGFFRAIPVIMLIFWTYFLLPVVLGMEI-------PEITTVVCALALITSAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V++G++A+  GQ  A ++LG    +    ++LPQA+R ++P   +Q++ L+K++SLA  
Sbjct: 114 GVKAGILAIGEGQWRAGLSLGFNRWEVLWYIVLPQALRMMVPSFINQWIALIKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG A+L  +   + N++    +E+ L    +Y  + + + L  N +  + +++ ++
Sbjct: 174 VGVAELSFLATQVNNRSMVYPMEVFLFVALVYFVMCLSLELIANSVARRFSMQRQR 229


>gi|182435532|ref|YP_001823251.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326776169|ref|ZP_08235434.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178464048|dbj|BAG18568.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326656502|gb|EGE41348.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 313

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 93/232 (40%), Gaps = 18/232 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSF-VLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           +      +          A   + +    G+               +     P+ + +T 
Sbjct: 46  LAPEMWDIFNYAGIRQNIADALLATLKAFGLAAVGSLVLGVVLVVGRLSDHKPVRWAATT 105

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I    +L L+   Y +              G        +L   LS Y     AE++R+
Sbjct: 106 FIELFRSLPLLITIYAIWV------------GFLTDHSMWALAAGLSVYNGCVQAEVLRA 153

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +VP+GQ EAA ALG++  +    VL+PQA+RS++P +  Q +  LK++SL   + + 
Sbjct: 154 GINSVPKGQSEAAYALGMSKTQVMVSVLMPQAVRSMLPTIIGQLVVTLKDTSLGFIILYP 213

Query: 348 DLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L+     I + T        +  I++   +Y+++ ++++     +  +   
Sbjct: 214 ELLQTARLIASNTQVNGQYPYVSTIVVIGTLYIAMCLLLSALATWIEKRGRR 265



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 33/61 (54%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            + T        + + ++G ++  GRLS +K V W    ++E+FR++P L+ I+ ++   
Sbjct: 67  LLATLKAFGLAAVGSLVLGVVLVVGRLSDHKPVRWAATTFIELFRSLPLLITIYAIWVGF 126

Query: 153 L 153
           L
Sbjct: 127 L 127


>gi|33595039|ref|NP_882682.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33565116|emb|CAE35911.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis]
          Length = 252

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 7/190 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE- 265
           ++R       K L  +Y+  F    +P +V + L Y   F  P L            PE 
Sbjct: 52  VARTLPYSLVKRLAAVYVEVF--RNIPLIVQMFLWY---FVLPELLPKALGDWIKQLPEG 106

Query: 266 -FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  +++  Y +A I E +R+G+ A+P GQ +A +ALGLT  +  R VLLP A+R ++
Sbjct: 107 SFYTAALSIGVYMSARIGEQLRAGIEALPPGQRQAGLALGLTLPQLYRHVLLPNALRMVL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P +TS  LN +KN+S+A+ +G ADL +    +   + Q  E  L     YL+L++++ + 
Sbjct: 167 PTMTSDCLNTIKNTSVALTIGLADLTAQAHAMQEYSFQVFEAFLTATVAYLALNLIVIVA 226

Query: 385 MNRLNAKIAL 394
           M  L   +++
Sbjct: 227 MRALERWVSI 236



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 36/85 (42%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               +Y   +L G   T   A      A  +G  VG  R     LV  +  VYVEVFRNI
Sbjct: 16  DGGQTYLQTLLDGLAVTVQTAALAWALALGLGIAVGVARTLPYSLVKRLAAVYVEVFRNI 75

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIV 164
           P +V +F  Y  +  +LP      +
Sbjct: 76  PLIVQMFLWYFVLPELLPKALGDWI 100


>gi|315655535|ref|ZP_07908434.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
 gi|315656552|ref|ZP_07909439.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315490190|gb|EFU79816.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 51333]
 gi|315492507|gb|EFU82111.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 217

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +  +     PL +I  F I  +    L+     ++F    L +            F +  
Sbjct: 36  YAGRVVPFKPLNWIVQFYISIMRGTPLMLQLMVVYFGPYYLFKVPISASYN----FWAAI 91

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA S   AA+ AEI R G  A+P+GQ EAA  LG + ++    + LPQ  R+++P +T++
Sbjct: 92  IAFSVNYAAYFAEIYRGGFQAIPQGQTEAAFVLGYSQQRTFYTIKLPQMFRTVLPSITNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SLA  + F ++ S+     + T  ++   +     Y   ++++A+ MN+L  
Sbjct: 152 VITLVKDTSLAQVISFLEMFSIAREYASTTA-SMAPFVAAGIFYYVFNMVVAMTMNKLEK 210

Query: 391 KIALKE 396
           +++  +
Sbjct: 211 RVSKYQ 216


>gi|307727657|ref|YP_003910870.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588182|gb|ADN61579.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 240

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G V        ++    +  +    +Y + F       LV+    +  
Sbjct: 24  MTVALTLAALAVGAVFGALVAA-AKLSRVRVLRVTGDIYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ RS ++AV RG++EAA ++G
Sbjct: 82  STLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   +YL ++ +     N   A++    K+
Sbjct: 202 TFFVVGGALYLLMTSISNRVFNHAEARVGRSFKR 235



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 39/92 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+  + T  L  + +    + G LV A +LS  +++     +Y  VFR +P L+V
Sbjct: 14  WGGVLLLAALMTVALTLAALAVGAVFGALVAAAKLSRVRVLRVTGDIYTTVFRGVPELLV 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I+  Y    +++            + +    +
Sbjct: 74  IYLFYFGGSTLVTTVGQWFGAEGFVGVPPFVI 105


>gi|91977032|ref|YP_569691.1| amino acid ABC transporter permease [Rhodopseudomonas palustris
           BisB5]
 gi|91683488|gb|ABE39790.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodopseudomonas palustris BisB5]
          Length = 502

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 20/229 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R      +T+  +    V S  +GI L+L      R       +   + +I  +    L 
Sbjct: 288 RQWGGLLVTLVVSVTGIVGSMPIGIALAL-----GRRSTIPLIRLFCIGFIEFWRGVPLI 342

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           T VL    Y L           F+ G+      + + I ++ +  A+ AE+VR GL A+P
Sbjct: 343 T-VLFFATYMLPL---------FLPGNFTIDGLLRVLIGIALFAGAYNAEVVRGGLNAIP 392

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV- 352
           RGQ EAA ALGL++ K T L++LPQA+R +IP L + ++ L K++SL   V   DL+   
Sbjct: 393 RGQGEAASALGLSYAKTTGLIVLPQALRHVIPGLVNSFIALFKDTSLVSIVALFDLLGQL 452

Query: 353 ----GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                    +              IY      ++ +   +  ++    +
Sbjct: 453 RAAFADPTWSTPNTLFTGFAFTGLIYFVFCFGMSRYSLFVEHRLNAHRR 501



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL 90
           +I+  L+ +I     N     +    L  GI  +   A   +D+G +P      +     
Sbjct: 238 VIVTALVLLIGGGLRNGARAPLMSLALFAGIALVI--AVLRLDRGGLPIVGTRQWG---- 291

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G + T  ++ +G++ +  IG  +  GR S   L+   C  ++E +R +P + V+FF   
Sbjct: 292 -GLLVTLVVSVTGIVGSMPIGIALALGRRSTIPLIRLFCIGFIEFWRGVPLITVLFFATY 350

Query: 151 SVLSVLP 157
            +   LP
Sbjct: 351 MLPLFLP 357


>gi|121606346|ref|YP_983675.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120595315|gb|ABM38754.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 221

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +++V + V+G ++    T  +  +  + G       +   L   +P LV I L Y   F
Sbjct: 15  FRLWVVAMVVGALMGTLRTLPNSPWLVRLGN------VWVELFRNIPLLVQIFLWY---F 65

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +            P F+ + +AL  +T+A IAE VR+G+ A+ RGQ  A +ALG T
Sbjct: 66  VVPKM-----FPAMQQIPGFVLVVLALGFFTSARIAEQVRAGIQALARGQRYAGMALGFT 120

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LP A R I+PPLTS+ +NLLKNSS+A AV  A+L         +T + +EI
Sbjct: 121 TAQTYRYVILPMAFRIILPPLTSESMNLLKNSSVAFAVSIAELTMFAMQAQEETSRGVEI 180

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +    +Y   +  +   M     K+ +
Sbjct: 181 YIAVTALYAISAFAVNRLMALAEKKMQI 208



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 104 MIPATIIGTLVGAGRLSAN-KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            + A ++G L+G  R   N   +  +  V+VE+FRNIP LV IF  Y  V  + P     
Sbjct: 18  WVVAMVVGALMGTLRTLPNSPWLVRLGNVWVELFRNIPLLVQIFLWYFVVPKMFPAMQQI 77

Query: 163 I 163
            
Sbjct: 78  P 78


>gi|111023726|ref|YP_706698.1| glutamate transport system permease protein GluC [Rhodococcus
           jostii RHA1]
 gi|110823256|gb|ABG98540.1| glutamate transport system permease protein GluC [Rhodococcus
           jostii RHA1]
          Length = 226

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 6/226 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +++ +     T+   A   V + +LG +L+       R       + +   Y++ F   
Sbjct: 7   YSDQLIDAFWTTVQLTAFSAVGALILGTILAAM-----RVSPIPVARGVGTAYVTIFRNT 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L TL++I   + L     V               F    + LS YTAAF+ E +RSG+ 
Sbjct: 62  PL-TLIIIFCSFGLFQTMGVKLAPEQSPTFFEENNFRLAVLGLSVYTAAFVCESLRSGIN 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V  GQ EA  +LGLT  +  RL++LPQA R++  PL S  + L KN+++A  +G A+  
Sbjct: 121 TVHVGQAEAGRSLGLTFSQNLRLIVLPQAFRAVTAPLGSVLIALTKNTTIASVIGVAEAS 180

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +I        +  I+   ++ L++ + L    L+ +  +  
Sbjct: 181 LLMKEMIENEAAIFVVGGIFALGFVILTLPMGLLFGYLSKRYEVAR 226



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 46/105 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y+  ++  F  T  L     + A I+GT++ A R+S   +   +   YV +FRN P  
Sbjct: 5   SKYSDQLIDAFWTTVQLTAFSAVGALILGTILAAMRVSPIPVARGVGTAYVTIFRNTPLT 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           ++I F    +   + +       P     NN  L+   L++ T A
Sbjct: 65  LIIIFCSFGLFQTMGVKLAPEQSPTFFEENNFRLAVLGLSVYTAA 109


>gi|296162373|ref|ZP_06845166.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. Ch1-1]
 gi|295887406|gb|EFG67231.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Burkholderia sp. Ch1-1]
          Length = 220

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 94/214 (43%), Gaps = 1/214 (0%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                   T A   + + + G  L++FAT          G AL +L ++ F         
Sbjct: 1   MSTLDWNWTFAWSILPALLTGFQLTVFATCFGAIIAFVVGLALTMLRMTRFAWLTFSANA 60

Query: 237 LIALKYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            ++          +   F  +      +  F++  I L  Y +A  +EI R+G+  +  G
Sbjct: 61  FVSFVRGTPLLVQLYVLFYVLPKWGMSASAFVTGVIGLGVYYSASCSEIYRAGIEGIAPG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA+ LGL  R+    ++LPQA+R+++P L +Q + + K +SL   +   +L++    
Sbjct: 121 QWEAALTLGLPIRRVWSGIVLPQALRTVLPMLGNQVVAMFKETSLMSTITVMELLAQATN 180

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +   + +E + +   +Y  +S   A  + RL 
Sbjct: 181 VGSIQYRYVEPLTLAGLLYFVVSYGSAKLIRRLE 214



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T   S   A+L GF  T +    G I A ++G  +   R++    + +    +V   R 
Sbjct: 8   WTFAWSILPALLTGFQLTVFATCFGAIIAFVVGLALTMLRMTRFAWLTFSANAFVSFVRG 67

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            P LV ++ L+  +          +    G+ +           
Sbjct: 68  TPLLVQLYVLFYVLPKWGMSASAFVTGVIGLGVYYSASCSEIYR 111


>gi|33865375|ref|NP_896934.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 8102]
 gi|33632544|emb|CAE07356.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 8102]
          Length = 296

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 13/267 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P              ++  L   T+    + K+ +   VL  +L 
Sbjct: 31  LIRTGLGLGFGWLSRPAGFALAETALPYAPSDSYLWALTIGWLNSLKVILAGLVLATLLG 90

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIG-- 258
           + A   +R+   +  ++L   Y+   LI  +P L+ +   Y + F   P +     I   
Sbjct: 91  VAAGA-ARNSGNRLLRSLAGTYV--ALIRQVPLLLQLLFWYFVAFLGLPSMPVGGLIQLS 147

Query: 259 -------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  G  +S EF ++   L+ +T A IAEIVR G+ AVPRGQ EA  +LGL      
Sbjct: 148 NQGIQLLGLNLSVEFCAVLTGLTVFTGASIAEIVRGGINAVPRGQWEAFRSLGLNEGLGL 207

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE  L+ +
Sbjct: 208 RRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIEGFLLLL 267

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
             +L L+++I+  M  LN  +  + ++
Sbjct: 268 LSFLLLNLLISGGMAALNGAVLSRVRR 294



 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 61/110 (55%)

Query: 51  NMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATII 110
           N+ ++ L LG G+LS  AGF + +  +PY    SY  A+ +G++N+  +  +G++ AT++
Sbjct: 30  NLIRTGLGLGFGWLSRPAGFALAETALPYAPSDSYLWALTIGWLNSLKVILAGLVLATLL 89

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
           G   GA R S N+L+  +   YV + R +P L+ + F Y      LP   
Sbjct: 90  GVAAGAARNSGNRLLRSLAGTYVALIRQVPLLLQLLFWYFVAFLGLPSMP 139


>gi|330901738|gb|EGH33157.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330981317|gb|EGH79420.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 220

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 26/241 (10%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FATRLSRHFHE 213
            P      +      L +  L+    +    A   +   + G+VL+   F  RL    + 
Sbjct: 3   QPPGWLQELWNAREVLWSGFLTSIQCSALAIAAGTLIGMLAGLVLTYGGFFARLPIRLYV 62

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              +  P+  +   + + +P L                              F +  I L
Sbjct: 63  DLIRGTPVFVLVLAVFYMVPAL------------------------GWQISAFQAGAIGL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    
Sbjct: 99  TLFCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTE 158

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++A
Sbjct: 159 IVKASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVA 218

Query: 394 L 394
           L
Sbjct: 219 L 219


>gi|322392133|ref|ZP_08065595.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
 gi|321145033|gb|EFX40432.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus peroris ATCC 700780]
          Length = 229

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            + + + +    L+   +T+   A + VFS  LGI+++       +  H        ++ 
Sbjct: 16  SMSYLLEILPSLLNGAAMTLQVFALVLVFSIPLGILIAFCLQIHWKLLHY-------MID 68

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  +++ G P L+ +   Y +  +                    +  IA +   AA+ AE
Sbjct: 69  VYIWVMRGTPLLLQLIFIYYVLPNV-----------GIRFDRVPAAIIAFTLNYAAYFAE 117

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+  +P+GQ EAA  L  T     R ++LPQ  + ++P + ++ ++L+K++SL  A
Sbjct: 118 IFRGGIATIPQGQYEAAKVLKFTPLATVRYIILPQVTKIVLPSVFNEIMSLVKDTSLVYA 177

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G +DL+    T  N+    I + L    IYL +  ++ +   +L  K +   
Sbjct: 178 LGVSDLILASRTAANRDASLIPMFL-AGAIYLLMIGIVTIVAKKLEKKFSYYR 229



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 4/108 (3%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLV 125
           + I   I+      SY   IL   +N    T  +    ++ +  +G L+        KL+
Sbjct: 4   YAIMGTIIFRRCSMSYLLEILPSLLNGAAMTLQVFALVLVFSIPLGILIAFCLQIHWKLL 63

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            ++  VY+ V R  P L+ + F+Y  + +V    D          LN 
Sbjct: 64  HYMIDVYIWVMRGTPLLLQLIFIYYVLPNVGIRFDRVPAAIIAFTLNY 111


>gi|291450578|ref|ZP_06589968.1| amino acid ABC transporter [Streptomyces albus J1074]
 gi|291353527|gb|EFE80429.1| amino acid ABC transporter [Streptomyces albus J1074]
          Length = 139

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 76/126 (60%)

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + L+ + AA+ AEIVR+G+++V  GQ++AA +LG+   +  R ++LPQAMRSI+P  
Sbjct: 9   AAVLGLALHQAAYAAEIVRAGVLSVDAGQLQAAASLGIPRLRQIRRIVLPQAMRSILPNA 68

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ ++L K +S+   +   +L      I  + G+ + ++++    Y+ L+ ++++  + 
Sbjct: 69  ANEIISLFKGTSIVSVMAIGELFYQVQVIYGRNGRVVPLLMVATLWYVLLTTVLSVVQHH 128

Query: 388 LNAKIA 393
           +  + A
Sbjct: 129 VEKRFA 134


>gi|326793482|ref|YP_004311302.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas mediterranea MMB-1]
 gi|326544246|gb|ADZ89466.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas mediterranea MMB-1]
          Length = 220

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 14/196 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L      L R +   + + +   Y+   LI   P +V +   +           F  
Sbjct: 32  GVALGTLCAVL-RQYGGASPRRIVASYVE--LIRNTPFIVQLFFIF-----------FGL 77

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                +   + +  IAL+    A+  EI+R+GL ++P+GQ+EAA  LG+T R+    V+ 
Sbjct: 78  PSIGVMLTPWQASVIALTINLGAYSTEIIRAGLGSIPKGQVEAAKVLGMTFRQTLTRVIF 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
             A   I P LTSQ + ++  S++   +   +L      + ++  +A E  L+   +YL 
Sbjct: 138 VPAFEKIYPALTSQCIIVMLGSAVISQISVEELTYAANLVQSRNFRAFESYLVTALLYLG 197

Query: 377 LSIMIALFMNRLNAKI 392
           L++++      +  ++
Sbjct: 198 LAMIMRYVFKLIGKRL 213


>gi|291542412|emb|CBL15522.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus bromii L2-63]
          Length = 216

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 89/205 (43%), Gaps = 13/205 (6%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            IF+ + +  I L L    +      K  K L   ++  ++I G P ++ + + + +   
Sbjct: 20  IIFIVTLLAAIPLGLII-SMGSMSKFKPLKWLTKTFV--WIIRGTPLMLQLFVVFYVPPL 76

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                      GS       +  IA     AA+ +EI R G+ +VP+GQ EA   LG+T 
Sbjct: 77  VS--------NGSVTFARMNAALIAFIINYAAYFSEIFRGGIESVPKGQYEAGQVLGMTK 128

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    ++L Q ++ I  P+ ++ + L+K++SL+  +   +++        Q    I  +
Sbjct: 129 GQIFFKIVLLQVVKKITAPMGNEIITLVKDTSLSSVIAIPEILMRAKDFSMQ--GLIWPL 186

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
                 +L+   ++ L  + +  K+
Sbjct: 187 FYSAVFFLAFCGILTLLFSFIEKKL 211



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 31/63 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF     +    ++ A  +G ++  G +S  K + W+ + +V + R  P ++ +F +
Sbjct: 11  LLEGFGENCIIFIVTLLAAIPLGLIISMGSMSKFKPLKWLTKTFVWIIRGTPLMLQLFVV 70

Query: 149 YKS 151
           +  
Sbjct: 71  FYV 73


>gi|260223280|emb|CBA33684.1| General L-amino acid transport system permease protein aapM
           [Curvibacter putative symbiont of Hydra magnipapillata]
          Length = 367

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           + +  +  +  V+ +    +++   +F  ++  +     +     +   S  +   L+L 
Sbjct: 120 MFWKAWLGLAWVVVLGSFFMLMSGDVFGMSKVDTDRWGGLPLTLLLSSLSMAMAFPLALL 179

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L R  +    K+L  +Y+            LI++ +   F  P+L    F       
Sbjct: 180 I-ALGRRSNLPAIKSLCTIYVELIRGVP-----LISVLFMASFMFPLLMPQGF-----NI 228

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              + +   ++ + AA++AE++R GL AVP+GQ+EAA  LGL++ +  R ++LPQA+  +
Sbjct: 229 DVLVRVPAGITLFAAAYMAEVIRGGLQAVPKGQIEAAATLGLSYWQTQRKIVLPQALSMV 288

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG----QAIEIILIWMFIYLSLSI 379
           +P + + +++  K++SL   V   +L       +N         IE  L    IY     
Sbjct: 289 VPGIMNNFISTFKDTSLVTIVSLYELTGSMSLALNSDADWRPYKIEGYLFIALIYFGFCF 348

Query: 380 MIALFMNRLNAKI 392
            ++ +   +  ++
Sbjct: 349 SMSRYSLWIEKQV 361



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           M  A  +  L+  GR S    +  +C +YVE+ R +P + V+F        ++P   +  
Sbjct: 170 MAMAFPLALLIALGRRSNLPAIKSLCTIYVELIRGVPLISVLFMASFMFPLLMPQGFNID 229

Query: 164 VL 165
           VL
Sbjct: 230 VL 231


>gi|297519677|ref|ZP_06938063.1| arginine transporter permease subunit ArtM [Escherichia coli OP50]
          Length = 181

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
                L   YI+ F   G P LV I L Y      P L ++  +      P ++   IAL
Sbjct: 1   PVLVWLVRGYITLFT--GTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEP-WLCALIAL 57

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  +AA+  ++    + A+P GQ ++  ALG++ +     +LLP A +  +   +++ + 
Sbjct: 58  SLNSAAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLA-ILLPYAFKRSLSSYSNEVVL 116

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K++SLA  +   +++     +  +T   + +      IYL ++ ++ L M  +  K  
Sbjct: 117 VFKSTSLAYTITLMEVMGYSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLMMRLIERKAL 175

Query: 394 LKEKK 398
             E++
Sbjct: 176 AFERR 180


>gi|295697136|ref|YP_003590374.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
 gi|295412738|gb|ADG07230.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           tusciae DSM 2912]
          Length = 214

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 14/223 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L      M     +     VL +++ LF   L+R +     +A+   Y+   +I G P
Sbjct: 6   QYLGPIGQGMFVTVALTALGTVLALIIGLFG-ALARQYGPWPLRAVVGAYVE--VIRGTP 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ +   +           F           F +  I LS Y  A+  E+ R+GL ++P
Sbjct: 63  QILQLFAVF-----------FGLTQYGIQLDAFTAAAIWLSAYGGAYAVELFRAGLHSIP 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             Q EA+ ALG++     R V+LPQA+ +I+P + S  +  +KNSSLA  +G  D++   
Sbjct: 112 HEQREASAALGISRWTTLRKVILPQALATILPAMVSFLVLQVKNSSLAFTIGVMDIMRRA 171

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +N T QA  + L+ +  Y  L+  ++     L  ++A   
Sbjct: 172 ELGVNATSQATLLYLMAVAAYFILNFPLSRLGIALERRVAQYR 214



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I  G   T  L   G + A IIG      R      +  +   YVEV R  P ++
Sbjct: 6   QYLGPIGQGMFVTVALTALGTVLALIIGLFGALARQYGPWPLRAVVGAYVEVIRGTPQIL 65

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            +F ++  +       D        +       +        ++ 
Sbjct: 66  QLFAVFFGLTQYGIQLDAFTAAAIWLSAYGGAYAVELFRAGLHSI 110


>gi|157368267|ref|YP_001476256.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320031|gb|ABV39128.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 237

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 10/234 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     L    LS+          +   + +   +L    T + R    +  + L + Y 
Sbjct: 1   MNLDWLLAPEYLSWLWRGFLLTLWLSACASLAATLLGFLLTAM-RDSRLRALRWLAVGYS 59

Query: 225 STFLIFGLPTLVLIALKYQ-----LHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYT 277
           S F     P LV +   Y      L          +   G    P  EF++ +  L+ Y+
Sbjct: 60  SLF--RNTPLLVQLFFWYFAAGQILPSAAMQWLNTSHQIGPLEWPSFEFLAGFFGLTLYS 117

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +AFIAE +RSG+  V  GQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KN
Sbjct: 118 SAFIAEEIRSGIRGVAGGQKYAANALGLTGWQAMRYVVLPQALKIAMPPLLGQYMNVIKN 177

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SSL +A+G A+L      +  +T +  +   +   +Y+++  ++  +      +
Sbjct: 178 SSLTMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALLEGWGMWRQQR 231



 Score = 63.0 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 52/119 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     Y + +  GF+ T WL+    + AT++G L+ A R S  + + W+   Y  +F
Sbjct: 3   LDWLLAPEYLSWLWRGFLLTLWLSACASLAATLLGFLLTAMRDSRLRALRWLAVGYSSLF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           RN P LV +FF Y +   +LP      +            SF  L       ++  +F+
Sbjct: 63  RNTPLLVQLFFWYFAAGQILPSAAMQWLNTSHQIGPLEWPSFEFLAGFFGLTLYSSAFI 121


>gi|283832261|ref|ZP_06352002.1| histidine transport system permease protein HisQ [Citrobacter
           youngae ATCC 29220]
 gi|291071903|gb|EFE10012.1| histidine transport system permease protein HisQ [Citrobacter
           youngae ATCC 29220]
          Length = 228

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 89/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L    +T++      V + ++G+V +      SR           +    T LI 
Sbjct: 5   FSGVILQGAIVTLELALSSVVLAVLIGLVGAAAKLSQSRALGL-------IFEAYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +                        ++  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIALNAVTDAMGISQIDIDPMVAGIITLGFIYGAYFTETFRGAFM 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+G +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 AVPKGHIEAATAFGFTSSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T +     ++   IYL  + +    +  L  + ++  K+
Sbjct: 178 KATQLAGKSTWEPFYFAVVCGVIYLVFTTVSNGVLLYLERRYSVGVKR 225



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +  A +LS ++ +  I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAAAKLSQSRALGLIFEAYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|167561988|ref|ZP_02354904.1| histidine transport system permease protein [Burkholderia
           oklahomensis EO147]
 gi|167574925|ref|ZP_02367799.1| histidine transport system permease protein [Burkholderia
           oklahomensis C6786]
          Length = 237

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 90/228 (39%), Gaps = 2/228 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLY 223
           +   +    R   +      T   I ++  V+ I +    +           K L   ++
Sbjct: 1   MIELIQEYWRNYLYTDGYRFTGLAITLWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVW 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T++  G P  V + L Y   +   V+     +  +          +A +  T A+  E
Sbjct: 61  LYTYVFRGTPLYVQLLLCYTGLYSLQVVRGAPML-DAFFRDGMNCTLLAFTLNTCAYTTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    + A   G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A  
Sbjct: 120 IFAGAIKATTYGEIEAARAYGMSTFTLYRRVVLPSALRRALPLYSNEVILMLHATTVAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               D++ +   + + T  +     I   +YL++S  +     R   +
Sbjct: 180 ATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERR 227



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 38/124 (30%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A    +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGLAITLWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     N  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQVVRGAPMLDAFFRDGMNCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|17987492|ref|NP_540126.1| general L-amino acid transport system permease protein AAPM
           [Brucella melitensis bv. 1 str. 16M]
 gi|256044434|ref|ZP_05447338.1| general L-amino acid transport system permease protein AAPM
           [Brucella melitensis bv. 1 str. Rev.1]
 gi|260563785|ref|ZP_05834271.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|265990854|ref|ZP_06103411.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17983190|gb|AAL52390.1| general l-amino acid transport system permease protein aapm
           [Brucella melitensis bv. 1 str. 16M]
 gi|260153801|gb|EEW88893.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|263001638|gb|EEZ14213.1| amino acid ABC transporter permease [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 343

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 21/307 (6%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A    + A     L G   +S    V     ++  +   + PL++     K + ++L   
Sbjct: 50  ACWAFVNAKYEQFLYGRYPISERWRVDLTALIFAAL---LVPLLIPKIPKKGLNAILFFL 106

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTG 216
              +V  F +     GL +    +     + +    +GI +SL       L R       
Sbjct: 107 VFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGIVPALGRRSKLPVI 166

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K L +++I       L T++ +A      F  P               + +   I ++ +
Sbjct: 167 KTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP----------GVTFDKLLRALIGVALF 216

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQA++ +IP + + ++ L K
Sbjct: 217 ASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQALKLVIPGIVNTFIGLFK 276

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++SL   +G  DL+ +     +             ++   F++      ++ +   +  +
Sbjct: 277 DTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFVFWIFCFAMSRYSIFMERR 336

Query: 392 IALKEKK 398
           +    K+
Sbjct: 337 LDTGHKR 343



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G +   GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 130 LWGGLLVTLVLSFVGIAVSLPLGIVPALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 189

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 190 SVMLPLFLPP 199


>gi|53728921|ref|ZP_00348273.1| COG0765: ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209155|ref|YP_001054380.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae L20]
 gi|126097947|gb|ABN74775.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
          Length = 219

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R +    +T+  +    + S + G+++++        +  K    L   
Sbjct: 1   MNWSYVINAIPRFIDAAIITLQLSFWGILLSLIFGLLIAVIT-----AYQVKPFNRLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 56  YIE--LSRNTPLLIQLFFLYY-----------GLPKIGIKWDGFTCGIIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           AV  A+L+ V   II    +  E + +    YL + + I+L       K
Sbjct: 163 AVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFENK 211



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F G++ + I G L+        K    + R Y+E+ RN P L+ +FFL
Sbjct: 13  FIDAAIITLQLSFWGILLSLIFGLLIAVITAYQVKPFNRLARGYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YYGLPKIGIK 82


>gi|317053914|ref|YP_004117939.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951909|gb|ADU71383.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 239

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 93/228 (40%), Gaps = 6/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+  T+T+  +   ++   +LG +L       SR   +  G      YI+ F   
Sbjct: 15  WGGVLLNAATVTVTVSLCAWLLGAILGSLLCWMQIGGSRWQQKLAG-----GYITLFR-G 68

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV+    +       + G+   I G      F++  IA+   + A+ + + R    
Sbjct: 69  VPELLVIYLFYFGGRQVVALFGEMLDIAGPYDVNGFVAGAIAIGLISGAYQSGVFRGAYH 128

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P+G +EAA   G+      R +++PQA+++ +P + +Q+ +++K S+L    G  + +
Sbjct: 129 VIPKGTLEAATVTGMGRLMMFRRMIVPQALKTALPGMGNQWQSVIKESALVSVTGLVETM 188

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   T  N T        +   IYL ++         +       +++
Sbjct: 189 NQISTASNSTQMPFFFYSVGAVIYLIITTCSDFIFRYVEKVAMRGQQR 236



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           ID  ++ +  D  +   +L     T  ++    +   I+G+L+   ++  ++    +   
Sbjct: 3   IDWQLLGF-GDEGWGGVLLNAATVTVTVSLCAWLLGAILGSLLCWMQIGGSRWQQKLAGG 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           Y+ +FR +P L+VI+  Y     V+ +    + +     +N
Sbjct: 62  YITLFRGVPELLVIYLFYFGGRQVVALFGEMLDIAGPYDVN 102


>gi|163744467|ref|ZP_02151827.1| polar amino acid uptake family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161381285|gb|EDQ05694.1| polar amino acid uptake family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 250

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 3/204 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I   +F  G+++ LF     + +     +   LL + T +I  +P LVLI + Y +  
Sbjct: 36  LQIAFGAFGFGLLIGLFG-AYGKLYGGVVLRD--LLAVYTTVIRAVPELVLILILYYVGT 92

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G       ++    L     A+  E++R  + A+P GQ+EAA A G+ 
Sbjct: 93  DLINQLSQAMGYGRVEISGVVAGIWVLGVVQGAYATEVLRGAIQAIPPGQIEAARAYGMP 152

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V +P  M    P L + +L   K+++L   VGF++L          T      
Sbjct: 153 PLMLMRRVTIPAMMSFATPGLANLWLIATKDTALLAIVGFSELTLETRQAAASTRAYFTF 212

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            L    +YL +++   +   R+  
Sbjct: 213 FLAAGALYLIVTLCSGVVFARIEK 236



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 25/177 (14%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G  N+  +AF       +IG     G+L    ++  +  VY  V R +P LV+
Sbjct: 24  WGGNLLRGLANSLQIAFGAFGFGLLIGLFGAYGKLYGGVVLRDLLAVYTTVIRAVPELVL 83

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-VLSLF 203
           I  LY                          L           ++ +   V GI VL + 
Sbjct: 84  ILILYYVGT---------------------DLINQLSQAMGYGRVEISGVVAGIWVLGVV 122

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI---ALKYQLHFDKPVLGQFNFI 257
               +        +A+P   I     +G+P L+L+    +   + F  P L     I
Sbjct: 123 QGAYATEVLRGAIQAIPPGQIEAARAYGMPPLMLMRRVTIPAMMSFATPGLANLWLI 179


>gi|307246615|ref|ZP_07528686.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307255600|ref|ZP_07537405.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307260051|ref|ZP_07541763.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306852487|gb|EFM84721.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306861449|gb|EFM93438.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306865887|gb|EFM97763.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 219

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R +    +T+  +    + S + G+++++        +  K    L   
Sbjct: 1   MNWSYVINAIPRFIDAAIITLQLSFWGILLSLIFGLLIAIVT-----AYQVKPFYGLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 56  YIE--LSRNTPLLIQLFFLYY-----------GLPKIGIKWDGFTCGIIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           AV  A+L+ V   II    +  E + +    YL + + I+L       K
Sbjct: 163 AVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFENK 211



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F G++ + I G L+        K    + R Y+E+ RN P L+ +FFL
Sbjct: 13  FIDAAIITLQLSFWGILLSLIFGLLIAIVTAYQVKPFYGLARGYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YYGLPKIGIK 82


>gi|298346993|ref|YP_003719680.1| amino acid ABC transporter membrane protein [Mobiluncus curtisii
           ATCC 43063]
 gi|304389300|ref|ZP_07371265.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|298237054|gb|ADI68186.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii ATCC 43063]
 gi|304327418|gb|EFL94651.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 217

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +  +     PL +I  F I  +    L+     ++F    L +            F +  
Sbjct: 36  YAGRVVPFKPLNWIVQFYISIMRGTPLMLQLMVVYFGPYYLFKVPISASYN----FWAAI 91

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IA S   AA+ AEI R G  A+P+GQ EAA  LG + ++    + LPQ  R+++P +T++
Sbjct: 92  IAFSVNYAAYFAEIYRGGFQAIPQGQTEAAFVLGYSQQRTFYTIKLPQMFRTVLPSITNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K++SLA  + F ++ S+     + T  ++   +     Y   ++++A+ MN+L  
Sbjct: 152 VITLVKDTSLAQVISFLEMFSIAREYASTTA-SMAPFVAAGIFYYVFNMVVAVTMNKLEK 210

Query: 391 KIALKE 396
           +++  +
Sbjct: 211 RVSKYQ 216


>gi|219871254|ref|YP_002475629.1| arginine transporter permease subunit ArtM [Haemophilus parasuis
           SH0165]
 gi|219691458|gb|ACL32681.1| arginine transporter permease subunit ArtM [Haemophilus parasuis
           SH0165]
          Length = 227

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 97/225 (43%), Gaps = 6/225 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     + T+  +   S ++   L++  T L      +  K +   +++ F   G 
Sbjct: 3   QEYFMVIAQGIPTSLLLTFVSLIVAFFLAVGMTFLL-SMENRLVKGIVNGFLTLFT--GT 59

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV   L Y      P +    F   S +S  +    + L+  +AA+   +    + A+
Sbjct: 60  PLLVQFFLIYAGPGQFPWIVASPF--WSLLSDAWFCAMLTLALNSAAYTTLLFHGAVKAI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ E   ALGL+  +    +L+P A++  +P  +++ + + K +SLA  +   D++  
Sbjct: 118 PKGQWETCAALGLSRLQTL-KILVPYALKRALPSYSNEIILVFKGTSLASTITIMDIMGY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +      A+ I  +   +YL ++ ++ + + R+  K+   E+
Sbjct: 177 ARQLYGTEYDALTIYGLAGAVYLVITGIMTVILRRVERKVLSFER 221


>gi|170695849|ref|ZP_02886990.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170139273|gb|EDT07460.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 240

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G V        ++    +  + +   Y + F       LV+    +  
Sbjct: 24  MTVALTLAALAVGAVFGALIAA-AKLSRLRVLRVIGETYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ RS ++AV RG++EAA ++G
Sbjct: 82  STLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   +YL ++ +     NR  A++    K+
Sbjct: 202 TFFVVGGALYLLMTSISNRVFNRAEARVGRSFKR 235



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 39/92 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+  + T  L  + +    + G L+ A +LS  +++  I   Y  VFR +P L+V
Sbjct: 14  WGGVLLLAALMTVALTLAALAVGAVFGALIAAAKLSRLRVLRVIGETYTTVFRGVPELLV 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I+  Y    +++            + +    +
Sbjct: 74  IYLFYFGGSTLVTTVGQWFGAEGFVGVPPFVI 105


>gi|83950535|ref|ZP_00959268.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
 gi|83838434|gb|EAP77730.1| glutamate/aspartate ABC transporter, permease protein [Roseovarius
           nubinhibens ISM]
          Length = 218

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 13/225 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +    L F    +  +  + + + + GIVL      L R             Y++
Sbjct: 3   DFDFSVIADNLPFLWQGLQLSLWLTLLAIIGGIVLGTLL-ALMRLSGLWWLALPAAGYVN 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                      LI + +  +F  P+       G       F S  IA   + AA+ +EI+
Sbjct: 62  LIRSVP-----LILVIFWFYFLVPLALGRPIGG-------FYSALIAFVMFEAAYYSEII 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++ +GQ+ AA A+GL++ +  R V+LPQA R++IP L +Q + L +++SL   V 
Sbjct: 110 RAGIQSIRQGQVHAAQAVGLSYWQTQRYVVLPQAFRNMIPILVTQGIILFQDTSLVFVVS 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             D ++    +    G+ +E+ +    +Y  +    +LF+ RL  
Sbjct: 170 LRDFMTASSIVARTEGRLVEMYIFAALVYFVICFAGSLFVRRLKK 214



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 35/71 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   + WL    +I   ++GTL+   RLS    +A     YV + R++P ++VIF+ 
Sbjct: 16  LWQGLQLSLWLTLLAIIGGIVLGTLLALMRLSGLWWLALPAAGYVNLIRSVPLILVIFWF 75

Query: 149 YKSVLSVLPIP 159
           Y  V   L  P
Sbjct: 76  YFLVPLALGRP 86


>gi|319404357|emb|CBI77957.1| ABC transporter, permease protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 221

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S +LG+ L L    +    + +  KA+  L+ S F       L L  + Y L
Sbjct: 9   MTLSLALCSIILGLPLGLMNATMI-QSNIRILKAIATLFSSVFRGL-PEILTLFFVYYGL 66

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +  F  I        F++  +A S   AAF  E+  +      + Q EAA  LG
Sbjct: 67  QNCIQAIFDFLNIDIIFSINAFIAGVLAFSMVFAAFSCEVWLAAFKMFDKSQYEAAQVLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       ++ PQ + + +P L++ +L LLK++SL   +   DL+         T + I
Sbjct: 127 LSRSTTFFRIVFPQLLHNALPGLSNNWLTLLKDTSLVSTISLLDLMRQTNLAATATNEPI 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L+   +YL  S + +  +  L+   + + K+
Sbjct: 187 LFYLVACLLYLLFSAVSSAILRYLDKMHSSRNKR 220


>gi|315650944|ref|ZP_07903984.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315486790|gb|EFU77132.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 216

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 10/187 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R    KT   L  +YIS  ++ G P ++ + + Y   +       + F    T S  
Sbjct: 36  AFGRMSKIKTVSYLCKIYIS--IMRGTPLMLQLMVVYFGPY-------YIFGVSITGSYR 86

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            ++  I      AA+ AEI RSG+ ++  GQ EAA  LG T  +   +++LPQ ++ I+P
Sbjct: 87  IVATVIGFVINYAAYFAEIYRSGIQSMSGGQYEAAKILGYTKSQTFFVIILPQVIKRILP 146

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +T++ + L+K++SLA  +  A++ ++   + + T  ++   +     Y   + ++A  M
Sbjct: 147 SVTNEVITLVKDTSLAFTISVAEMFTMAKALASST-TSMYPFVCAALFYYIFNAIVAFVM 205

Query: 386 NRLNAKI 392
             +  K+
Sbjct: 206 EFIEKKL 212


>gi|313107728|ref|ZP_07793910.1| hypothetical protein PA39016_001060055 [Pseudomonas aeruginosa
           39016]
 gi|187939707|gb|ACD38849.1| polar amino acid uptake transporter family protein [Pseudomonas
           aeruginosa]
 gi|310880412|gb|EFQ39006.1| hypothetical protein PA39016_001060055 [Pseudomonas aeruginosa
           39016]
          Length = 223

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 13/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L      +    ++ + S ++G+V   F   L         +    L
Sbjct: 1   MNYQFDFHFLGGSLPALLDGLKVTLELALVSNLIGLVAG-FGLSLMTLSRWFFIRWPAQL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++  F     P L+ I       +  P+L               +  ++AL     AF A
Sbjct: 60  FVEFF--RCTPALLQIV---WFFYCLPMLFGLFIE-------PIVMGFLALGLNLTAFNA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ AVPR Q++A+ ALGL   + T  V+LPQA+RS +P L +  +  L+ S+L  
Sbjct: 108 EAYRAGVQAVPREQLDASTALGLKPWQRTLHVVLPQALRSAVPVLMTNGIGSLQQSALVA 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V  +DL+ VG ++  +  + +E   +   +Y +LS+ +   +  L  +  L  ++
Sbjct: 168 IVAVSDLMYVGKSLATEAYRPLETYTLIALVYFALSLPVGQLVQYLERRQDLAVQR 223



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA    +   + G  +    LS    + W  +++VE FR  P L+ I +
Sbjct: 16  ALLDGLKVTLELALVSNLIGLVAGFGLSLMTLSRWFFIRWPAQLFVEFFRCTPALLQIVW 75

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
            +  +  +  +    IV+ F
Sbjct: 76  FFYCLPMLFGLFIEPIVMGF 95


>gi|25028402|ref|NP_738456.1| glutamate transport system permiase GluC [Corynebacterium efficiens
           YS-314]
 gi|259507459|ref|ZP_05750359.1| glutamate transport system permease protein GluC [Corynebacterium
           efficiens YS-314]
 gi|23493687|dbj|BAC18656.1| glutamate transport system permiase GluC [Corynebacterium efficiens
           YS-314]
 gi|259164947|gb|EEW49501.1| glutamate transport system permease protein GluC [Corynebacterium
           efficiens YS-314]
          Length = 249

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 3/248 (1%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
               +  P+P  +        L                ++ V+S +  ++L    T + R
Sbjct: 4   IITFTTDPLPFLTEEKFPMSTLWADLGPSLLPAFWVTIQLTVYSAIGSMILGTILTAM-R 62

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               K  +++   YI+T     L TLV++   + L+ +  +               F   
Sbjct: 63  VSPVKILRSISTAYINTVRNTPL-TLVILFCSFGLYQNLGLTLAGRDSSTFLADNNFRLA 121

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +    YT+AF+AE +RSG+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +
Sbjct: 122 VLGFILYTSAFVAESLRSGINTVHFGQAEAARSLGLGFSDIFRSIIFPQAVRAAIIPLGN 181

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             + L KN+++A  +G  +   +   TI N       +  I+   ++ L++ + L + +L
Sbjct: 182 TLIALTKNTTIASVIGVGEASLLMKSTIENHANMLFVVFAIFAVGFMILTLPMGLGLGKL 241

Query: 389 NAKIALKE 396
             K+A+K+
Sbjct: 242 AEKMAVKK 249



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 42/99 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     I + I+GT++ A R+S  K++  I   Y+   RN P  +VI F 
Sbjct: 33  LLPAFWVTIQLTVYSAIGSMILGTILTAMRVSPVKILRSISTAYINTVRNTPLTLVILFC 92

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              +   L +          +  NN  L+     + T+A
Sbjct: 93  SFGLYQNLGLTLAGRDSSTFLADNNFRLAVLGFILYTSA 131


>gi|309811071|ref|ZP_07704869.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
 gi|308435035|gb|EFP58869.1| ABC transporter, permease protein [Dermacoccus sp. Ellin185]
          Length = 226

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 13/232 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F +   L    +T+       V S VLG ++++      R       + L   YI+ F 
Sbjct: 4   LFSDYHLLDALWMTIKLTLVAAVGSLVLGTLVAVL-----RMSPVPMLRFLGTSYINIFR 58

Query: 229 IFGLPTLVL---IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              L  ++L   + L  +L  +       +F   +     F    I L+ Y AA++ E +
Sbjct: 59  NTPLTLIILSCNLVLWAKLGVELADSKSPDFFTSNN----FRLAVIGLTVYHAAYVCEAL 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  +P GQ EAA ++GLT  ++ R V+LPQA R  I PL +  + L KN+++AV +G
Sbjct: 115 RSGVNTIPLGQAEAARSIGLTFSQSLREVILPQAFRGAIVPLGNALIALTKNTTVAVVIG 174

Query: 346 FADLVSV-GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++ ++      +  G   +        +++L++   L +  L  K+A+K 
Sbjct: 175 VMEMAAMLAKVTEDDPGLLNQAFFASALAFVALTLPTGLLVGYLGKKLAVKR 226



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 43/101 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L     + + ++GTLV   R+S   ++ ++   Y+ +FRN P  ++I   
Sbjct: 10  LLDALWMTIKLTLVAAVGSLVLGTLVAVLRMSPVPMLRFLGTSYINIFRNTPLTLIILSC 69

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
              + + L +       P     NN  L+   LT+   A +
Sbjct: 70  NLVLWAKLGVELADSKSPDFFTSNNFRLAVIGLTVYHAAYV 110


>gi|296102998|ref|YP_003613144.1| allantoate transport membrane protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057457|gb|ADF62195.1| allantoate transport membrane protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 219

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 11/224 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M             +       + S V  +  ++    L           + L+     L
Sbjct: 1   MMTTFTDWDIIRNLLLAGRWTILLSLVAFVGGAVVTLPLLLLRLTGGRMFMRLIRGYIEL 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P L+ + L +           F           + +  +AL+ YT+AF+ +I    
Sbjct: 61  FQGTPLLMQLFLAF-----------FGVALFGIDVSPWTAASLALTFYTSAFLLDIWFGS 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P+GQ EA+  LGLT  +    V+ PQA+R  I P     + ++K ++LA  +GF +
Sbjct: 110 IRALPKGQWEASRCLGLTFGQTLYRVVAPQALRIAIAPTVGFAVQVIKGTALASIIGFIE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   G  + N T Q  ++  +    Y  L   ++ +   L  K 
Sbjct: 170 LTKAGTMLTNVTYQPFKVFALVALGYFILCYPLSRYSRYLETKF 213


>gi|257460053|ref|ZP_05625157.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Campylobacter gracilis
           RM3268]
 gi|257442494|gb|EEV17633.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Campylobacter gracilis
           RM3268]
          Length = 234

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 17/204 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             V+GI L      L +  + K    +   Y+   +I G P ++ + +            
Sbjct: 48  GIVIGIALGFMLAFL-KFLNNKFLSFIIDEYVD--IIRGTPIVIQLMV------------ 92

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F FI  +T S    +   AL   ++A++AEIVRSG+ +V RGQMEAA A+GL +  A +
Sbjct: 93  -FVFIIFATWSNNIAAAIFALGLNSSAYVAEIVRSGINSVDRGQMEAARAMGLGYGTAMK 151

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            ++ PQA+++I+P L +++++L K +S+   V   DL     ++       ++ IL    
Sbjct: 152 EIIFPQAIKNILPALANEFISLFKETSVVGLVAITDLTFFSKSMQAALY-TVQPILFAAV 210

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           +Y +     +  +  L +++   +
Sbjct: 211 LYYASVKFFSFLVKMLESRLNRND 234


>gi|157144752|ref|YP_001452071.1| hypothetical protein CKO_00479 [Citrobacter koseri ATCC BAA-895]
 gi|157081957|gb|ABV11635.1| hypothetical protein CKO_00479 [Citrobacter koseri ATCC BAA-895]
          Length = 228

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGLVG-AGAKLSQNRVTGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G       ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNAVTDAMGIGQIDIDPMVAGIITLGFIYGAYFTETFRGAFMAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T +  
Sbjct: 132 FTGSQIFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  + ++  K+
Sbjct: 192 YFAVVCGLIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            I  G + T  LA S ++ A +IG +    +LS N++   I   Y  + R +P LV++  
Sbjct: 8   VIFQGALVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|308178203|ref|YP_003917609.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter arilaitensis Re117]
 gi|307745666|emb|CBT76638.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter arilaitensis Re117]
          Length = 263

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 13/258 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   L+  ++  L          +  F  ++        +    K  +F  ++     L 
Sbjct: 15  IQIALFFVIIIALAALVDWKKASYAFFSFDKLGPMFPDMILVGLKNTIFYTIISFAFGLA 74

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L       +         +    F     +L+ L + +   +    Q          
Sbjct: 75  LGLLLALMKMASFAPYRWFATAFIEFFRGIPAILVLLAFGIGLPQAFGTQ---------W 125

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P+ +++  AL   +AA+IAE +R+GL AVP+GQ EAA +LG+   +A   +++PQA R +
Sbjct: 126 PQSVNVMCALGLVSAAYIAETLRAGLQAVPKGQTEAARSLGMPAWRAMVTIVIPQAFRIV 185

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +PP+T++ + L K++SLA  +G      ++   G   I Q    I  +++    YL ++I
Sbjct: 186 LPPMTNEIILLTKDTSLAFILGATIAQYEMTKFGRDGITQLDAGITPLVVAGLFYLVITI 245

Query: 380 MIALFMNRLNAKIALKEK 397
            ++L   +  ++    ++
Sbjct: 246 PLSLVARKFESRTTKTKR 263



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 29/76 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ILVG  NT +           +G L+   ++++     W    ++E FR IP ++V+   
Sbjct: 54  ILVGLKNTIFYTIISFAFGLALGLLLALMKMASFAPYRWFATAFIEFFRGIPAILVLLAF 113

Query: 149 YKSVLSVLPIPDHSIV 164
              +           V
Sbjct: 114 GIGLPQAFGTQWPQSV 129


>gi|222082285|ref|YP_002541650.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726964|gb|ACM30053.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 224

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 14/222 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +            L        T   + V + +L +++      + R    +  + + + 
Sbjct: 1   MHYTLQFRSIREYLPLLWDAAYTTLYLSVLAIILSVIIGCGL-AIMRRSQSRFARFVAVA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI            L+ + Y ++F  P +              F +  I L+  +A ++A
Sbjct: 60  YIEVMRNTP-----LLVILYIVYFALPAM--------GLRFSSFAAASIGLTLNSAGYMA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+GL+A+  GQ EAA A G    +  R ++L Q  R I  PL +Q + ++  SSLA 
Sbjct: 107 EIIRAGLVAIAHGQFEAARAQGFNPVQTYRHIILQQVFRVIYAPLGNQVIAVILASSLAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           AV   D+ S   T+ + + +  E  L+   +YL L   + L 
Sbjct: 167 AVAVEDVASWMQTVGSTSFRFFETFLVAAAVYLVLCQTVNLI 208



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + S   Y   +      T +L+   +I + IIG  +   R S ++   ++   Y+EV 
Sbjct: 5   LQFRSIREYLPLLWDAAYTTLYLSVLAIILSVIIGCGLAIMRRSQSRFARFVAVAYIEVM 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P LV+++ +Y ++ ++            G+ LN+ G     +     A  
Sbjct: 65  RNTPLLVILYIVYFALPAMGLRFSSFAAASIGLTLNSAGYMAEIIRAGLVAIA 117


>gi|319407434|emb|CBI81085.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella sp. 1-1C]
          Length = 250

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T   +    V +  +G+++ +  T           +A+   ++   ++  +P L
Sbjct: 34  LDGFKNTAILSIYSLVLAVFMGVIIGMIRTLPKTSIINNFLRAVGTFWVE--IMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +   P  + +  AL  +T+A IAE VRSG+ ++P G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAMNFPPILLIICALGFFTSARIAEQVRSGIESIPSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G    ++ R ++LP+A+R+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFNTYQSYRYIILPRAIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  L+   +Y+ +S+ I + M  +   I +
Sbjct: 204 TIEEVSHVYENYLLVTLLYIVISLFIFVLMTIIEKAIRI 242



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVF 136
             +Y   +L GF NT  L+   ++ A  +G ++G  R        N  +  +   +VE+ 
Sbjct: 26  SHTYLDTLLDGFKNTAILSIYSLVLAVFMGVIIGMIRTLPKTSIINNFLRAVGTFWVEIM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           RNIP LV +F  Y  V  + P   +   +
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPAMNFPPI 114


>gi|227510176|ref|ZP_03940225.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227513104|ref|ZP_03943153.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227083679|gb|EEI18991.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227190381|gb|EEI70448.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 214

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S  LG VL+L           K    + LL +  +L+ G P L
Sbjct: 13  LSGTKMTLSIFFWTLICSIPLGAVLALGLVS-------KFKPLVWLLNLYDWLMRGTPLL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  PV+          +   + +   A      A+ AEI R G  +VPRG
Sbjct: 66  LQLIFVF---YGLPVI--------GIIFERYDAALFAFILNYTAYFAEIFRGGFQSVPRG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  L L++ +  R +++PQ  + ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 115 QFESARVLRLSYGQTIRKIIIPQVFKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNV 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +    +  +++   IYL+L+ +  + +  +  + ++
Sbjct: 175 ATARD-VTLLPLVLVGIIYLALTAICTIVLKVIEKRSSV 212


>gi|260904716|ref|ZP_05913038.1| amino acid ABC transporter membrane protein [Brevibacterium linens
           BL2]
          Length = 280

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 22/253 (8%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++ F ++K   +            F        L     T+       + + V+G+V +L
Sbjct: 34  LIAFIIWKFADAGQLDAAKWYPFTFSQIQ-LVLLQGMAATLKVAVVASLLALVVGVVFAL 92

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R   +K       + +  F   G+P L+LI   + +                  
Sbjct: 93  L-----RLSSKKVISVPGTIVLEFF--RGVPVLLLIFAMFLIF--------------GNT 131

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F S+ I L+ Y    +AEI+R+G++AVP+GQ EAA+A+GL   +   LVL+PQA+R+
Sbjct: 132 IGAFWSVVIGLTLYNGMVLAEIIRAGILAVPKGQREAAMAIGLRPGQVMSLVLMPQALRA 191

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P + +Q + LLK+S+L   V + DL+     I  +    +   L+   +++ +++++A
Sbjct: 192 MMPTIIAQIVVLLKDSALGFIVTYQDLLYQVNLIGREYNNLLPTFLVGAVLFIIINMIVA 251

Query: 383 LFMNRLNAKIALK 395
                L  ++  K
Sbjct: 252 GIARWLEKRLQRK 264



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 56/140 (40%), Gaps = 18/140 (12%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R +NI + I+ AL+L  +  + +    +                 AG        P+T 
Sbjct: 16  ARRNNIILSIVSALVLAGLIAFIIWKFAD-----------------AGQLDAAKWYPFTF 58

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  +A    + A ++G +    RLS+ K+++    + +E FR +P 
Sbjct: 59  SQ-IQLVLLQGMAATLKVAVVASLLALVVGVVFALLRLSSKKVISVPGTIVLEFFRGVPV 117

Query: 142 LVVIFFLYKSVLSVLPIPDH 161
           L++IF ++    + +     
Sbjct: 118 LLLIFAMFLIFGNTIGAFWS 137


>gi|116617492|ref|YP_817863.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096339|gb|ABJ61490.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 248

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 7/236 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F   L    L      + T   + + S ++G+++        +       K + ++
Sbjct: 1   MNNFFQPHLIWEYLPDVLSALPTTLLLTLVSTIIGVIVG-AGIAFVKMEDTPIFKQIAVV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           + S   I G P L+ + L Y   +  P+   +  I    VSP  + L+I      AAF++
Sbjct: 60  FTSF--IRGTPILIQMFLVY---YGLPMFLGYVGINTDDVSP-LIYLFITYGLNMAAFLS 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+ L +VP  Q EAA+  G T R+    ++ PQA+   +P   +  ++LL+++SLA 
Sbjct: 114 EIIRAALESVPASQREAALTSGYTKRQMYFKIIFPQAVIIAVPSFATMVISLLQDTSLAF 173

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  D+V     +   T   +E  +  M I++ LS ++  F   +  +     +K
Sbjct: 174 TIGVLDVVGKAKALGTATFHTVEAYISAMIIFIILSFILERFFRWIEKRSNFTSRK 229


>gi|145589172|ref|YP_001155769.1| polar amino acid ABC transporter, inner membrane subunit
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047578|gb|ABP34205.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 260

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V+    T  +     +    L   ++  F    +P LV + L Y             FI 
Sbjct: 62  VMGTLRTLPADTRLNRFLVRLSTTWVELF--RNIPILVQVFLWY--------HVIPAFIL 111

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                P ++ + +AL  +T+A IAE VR+G+ ++P GQ  AA ALGL   ++ R V+LP 
Sbjct: 112 PLKALPSYLLVSLALGFFTSARIAEQVRAGIQSLPSGQRAAATALGLNTFQSYRYVILPM 171

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R +IPPLTS+ +NL+KNSS+A AV   +L         +T   +EI L    +Y   +
Sbjct: 172 ALRIVIPPLTSESMNLIKNSSVAFAVSVPELTLFAMQAQEETSHGVEIYLAVTILYALSA 231

Query: 379 IMIALFMNRLNAK 391
             I   M  +  +
Sbjct: 232 FAINRAMALIEKR 244



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVE 134
            +D SY   ++  +  T  +A  G+I + ++G ++G  R        N+ +  +   +VE
Sbjct: 29  NADPSYLDWLMKAWGWTLAVAGLGLIISLLLGAVMGTLRTLPADTRLNRFLVRLSTTWVE 88

Query: 135 VFRNIPPLVVIFFLY 149
           +FRNIP LV +F  Y
Sbjct: 89  LFRNIPILVQVFLWY 103


>gi|53718671|ref|YP_107657.1| histidine transport system permease [Burkholderia pseudomallei
           K96243]
 gi|53725158|ref|YP_102513.1| amino acid ABC transporter permease [Burkholderia mallei ATCC
           23344]
 gi|67639859|ref|ZP_00438689.1| histidine transport system permease protein HisM [Burkholderia
           mallei GB8 horse 4]
 gi|121601274|ref|YP_992326.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124386360|ref|YP_001028960.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126440775|ref|YP_001058138.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 668]
 gi|126451011|ref|YP_001081125.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei NCTC 10247]
 gi|126454024|ref|YP_001065373.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1106a]
 gi|134281215|ref|ZP_01767924.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 305]
 gi|166999940|ref|ZP_02265769.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei PRL-20]
 gi|167718614|ref|ZP_02401850.1| histidine transport system permease protein [Burkholderia
           pseudomallei DM98]
 gi|167737642|ref|ZP_02410416.1| histidine transport system permease protein [Burkholderia
           pseudomallei 14]
 gi|167814777|ref|ZP_02446457.1| histidine transport system permease protein [Burkholderia
           pseudomallei 91]
 gi|167823231|ref|ZP_02454702.1| histidine transport system permease protein [Burkholderia
           pseudomallei 9]
 gi|167851713|ref|ZP_02477221.1| histidine transport system permease protein [Burkholderia
           pseudomallei B7210]
 gi|167900310|ref|ZP_02487711.1| histidine transport system permease protein [Burkholderia
           pseudomallei 7894]
 gi|167908462|ref|ZP_02495667.1| histidine transport system permease protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167916790|ref|ZP_02503881.1| histidine transport system permease protein [Burkholderia
           pseudomallei 112]
 gi|167918056|ref|ZP_02505147.1| histidine transport system permease protein [Burkholderia
           pseudomallei BCC215]
 gi|217419487|ref|ZP_03450993.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 576]
 gi|226194407|ref|ZP_03790005.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei Pakistan 9]
 gi|237811357|ref|YP_002895808.1| histidine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|242316832|ref|ZP_04815848.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1106b]
 gi|254178338|ref|ZP_04884993.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei ATCC 10399]
 gi|254181370|ref|ZP_04887967.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1655]
 gi|254190770|ref|ZP_04897277.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254196811|ref|ZP_04903235.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei S13]
 gi|254199420|ref|ZP_04905786.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei FMH]
 gi|254205735|ref|ZP_04912087.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei JHU]
 gi|254260887|ref|ZP_04951941.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1710a]
 gi|254298303|ref|ZP_04965755.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 406e]
 gi|254357892|ref|ZP_04974165.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei 2002721280]
 gi|52209085|emb|CAH35026.1| histidine transport system permease protein [Burkholderia
           pseudomallei K96243]
 gi|52428581|gb|AAU49174.1| amino acid ABC transporter, permease protein [Burkholderia mallei
           ATCC 23344]
 gi|121230084|gb|ABM52602.1| histidine ABC transporter, permease protein [Burkholderia mallei
           SAVP1]
 gi|124294380|gb|ABN03649.1| histidine ABC transporter, permease protein [Burkholderia mallei
           NCTC 10229]
 gi|126220268|gb|ABN83774.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 668]
 gi|126227666|gb|ABN91206.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1106a]
 gi|126243881|gb|ABO06974.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei NCTC 10247]
 gi|134247521|gb|EBA47606.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 305]
 gi|147749016|gb|EDK56090.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei FMH]
 gi|147753178|gb|EDK60243.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei JHU]
 gi|148027019|gb|EDK85040.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei 2002721280]
 gi|157808288|gb|EDO85458.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 406e]
 gi|157938445|gb|EDO94115.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei Pasteur 52237]
 gi|160699377|gb|EDP89347.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei ATCC 10399]
 gi|169653554|gb|EDS86247.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei S13]
 gi|184211908|gb|EDU08951.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1655]
 gi|217396791|gb|EEC36807.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 576]
 gi|225933492|gb|EEH29481.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei Pakistan 9]
 gi|237503007|gb|ACQ95325.1| histidine ABC transporter, permease protein [Burkholderia
           pseudomallei MSHR346]
 gi|238520467|gb|EEP83927.1| histidine transport system permease protein HisM [Burkholderia
           mallei GB8 horse 4]
 gi|242140071|gb|EES26473.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1106b]
 gi|243064058|gb|EES46244.1| histidine ABC transporter, permease protein HisM [Burkholderia
           mallei PRL-20]
 gi|254219576|gb|EET08960.1| histidine ABC transporter, permease protein HisM [Burkholderia
           pseudomallei 1710a]
          Length = 237

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 88/223 (39%), Gaps = 4/223 (1%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFL 228
           +  N   +           +++    +GI   L     ++R   +K       LY  T++
Sbjct: 8   YWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWLY--TYV 65

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  V + L Y   +    +     +  +          +A +  T A+  EI    
Sbjct: 66  FRGTPLYVQLLLCYTGLYSLQAVRGTPML-DAFFRDGMNCTLLAFTLNTCAYTTEIFAGA 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A   G++EAA A G++     R ++LP A+R  +P  +++ + +L  +++A      D
Sbjct: 125 IKATSYGEIEAARAYGMSTFTLYRRIVLPSALRRALPLYSNEVILMLHATTVAFTATVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++ +   + + T  +     I   +YL++S  +     R   +
Sbjct: 185 ILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERR 227



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 38/124 (30%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K +A    +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     N  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|329117083|ref|ZP_08245800.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
 gi|326907488|gb|EGE54402.1| ABC transporter, permease protein [Streptococcus parauberis NCFD
           2020]
          Length = 215

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 8/177 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K   L  +  F +  +  + +I + + L+F  P              P  +   I  +  
Sbjct: 46  KQTWLRQLIKFYVSFMRGVPMIVVLFVLYFGLPYY--------GFQLPALLCALIGFTMV 97

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA++AE+ R  + AV  GQ EAA ALGL +    + V+LPQA R  +P L +  ++++K
Sbjct: 98  SAAYMAEVFRGSIEAVDFGQWEAARALGLPYASIVKQVILPQAFRIAVPSLGNVIIDMVK 157

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +SSL   +   D+      I ++    + + ++   IY  ++I++      +  K+A
Sbjct: 158 SSSLTAMITVPDIFQNAKIIGSREWDYMSMYILVALIYWGITIVLEKSQAVIEEKLA 214


>gi|307701964|ref|ZP_07638972.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           NCTC 12261]
 gi|307616609|gb|EFN95798.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           NCTC 12261]
          Length = 213

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 19/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS  ++T+   A + +FS  LG++++       +  H        L+ I  +++ G P L
Sbjct: 12  LSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKPLHH-------LINIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA     AA+ AEI R G+  +P G
Sbjct: 65  LQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAEIFRGGIDTIPNG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFSPFATVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 174 AANRDASLVPMFL-AGAIYLILIGIVTILAKKVEKKYSYYR 213



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    +I +  +G L+        K +  +  +Y+ + R  P L+ + F+
Sbjct: 11  LLSGASMTLQVFALVLIFSIPLGVLIAFALQVHWKPLHHLINIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S+    D          LN 
Sbjct: 71  YYVLPSIGIRLDRLPAAIIAFVLNY 95


>gi|209518061|ref|ZP_03266891.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501467|gb|EEA01493.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 250

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/177 (31%), Positives = 90/177 (50%), Gaps = 12/177 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R            +YI  F   G P L+ + L Y        +GQF  I  S + P    
Sbjct: 44  RVSPHWLPNRFARVYILVF--RGSPLLIQMFLVYY------GMGQFGIIRESFMWPVLRD 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            +M   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+     R V+ P A+R  +
Sbjct: 96  PYMCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLSGFALLRRVIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ +I
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVI 212



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L     T  L F  ++   ++  L+   R+S + L     RVY+ VFR  P L+ +
Sbjct: 12  LRQLLGAVPATLGLFFCSLVLGGLLSLLIVTMRVSPHWLPNRFARVYILVFRGSPLLIQM 71

Query: 146 FFLYKSVLSVLPIPDHSIVL 165
           F +Y  +     I +  +  
Sbjct: 72  FLVYYGMGQFGIIRESFMWP 91


>gi|331003782|ref|ZP_08327276.1| hypothetical protein HMPREF0491_02138 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412165|gb|EGG91560.1| hypothetical protein HMPREF0491_02138 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 216

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 102/222 (45%), Gaps = 10/222 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N   ++         +    F+ +L  +         R    K    +  +YIS  ++ 
Sbjct: 1   MNILDIALKLAPGMLVSIQIFFTTLLLSLPLGLVVAFGRLSKIKVVSYICKIYIS--IMR 58

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P ++ + + Y   +       + F    + S   ++  I      AA+ AEI RSG+ 
Sbjct: 59  GTPLMLQLMVVYFGPY-------YIFGVSISGSYRVIATVIGFVINYAAYFAEIYRSGIQ 111

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P GQ EAA  LG +  +   +++LPQ ++ I+P +T++ + L+K++SLA  +  A++ 
Sbjct: 112 SMPSGQYEAAKILGYSKSQTFFIIILPQVIKRILPSITNEVITLVKDTSLAFTISVAEMF 171

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++   + + T  ++   +     Y   + ++A  M+ +  K+
Sbjct: 172 TMAKALASST-TSMYPFVCAALFYYMFNAIVAFVMDMIEKKL 212


>gi|254693492|ref|ZP_05155320.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 3 str. Tulya]
 gi|261213750|ref|ZP_05928031.1| ABC-type amino acid transporter permease [Brucella abortus bv. 3
           str. Tulya]
 gi|260915357|gb|EEX82218.1| ABC-type amino acid transporter permease [Brucella abortus bv. 3
           str. Tulya]
          Length = 343

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L+  V  V+             ++         +T   +      S  LGI
Sbjct: 94  IPKKGLNAILFFLVFPVVAFFLLVGGWFGLPYVETPLWGGLLVTQVLSFVGIAVSLPLGI 153

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I       L T++ +A      F  P         
Sbjct: 154 VLAL-----GRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP--------- 199

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 + +   I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQ
Sbjct: 200 -GVTFDKLLRALIGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQ 258

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +     +             ++   F+
Sbjct: 259 ALKLVIPGIVNTFIGLFKDTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFV 318

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +   +  ++    K+
Sbjct: 319 FWIFCFAMSRYSIFMERRLDTGHKR 343



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 130 LWGGLLVTQVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 189

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 190 SVMLPLFLPP 199


>gi|259909373|ref|YP_002649729.1| Putative amino acid ABC transporter, permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|224964995|emb|CAX56523.1| Putative amino acid ABC transporter, permease protein [Erwinia
           pyrifoliae Ep1/96]
 gi|283479445|emb|CAY75361.1| putative ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
          Length = 221

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V +   G+VL +    L      K      +  +   LI   
Sbjct: 11  WPYWPELVSGLWVTIQLTVMATTGGVVLGIVGAAL---RSGKPSLLSRIWGVYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPNLGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LG+T R+    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGMTRRQTFMRVVLPPALKRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              I ++T  + E+ L+   +YL+LSI +   +
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLMYLALSIAMRQLL 209



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 39/96 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   ++ G   T  L         ++G +  A R     L++ I  VYVE+ 
Sbjct: 5   LNFPALWPYWPELVSGLWVTIQLTVMATTGGVVLGIVGAALRSGKPSLLSRIWGVYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLIN 100


>gi|254500818|ref|ZP_05112969.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222436889|gb|EEE43568.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 237

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 2/204 (0%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + +  +G++L  F   L++   E + K    +Y + F       L L  + + +  
Sbjct: 27  VSLALATLPIGLILG-FLIALAKKSSEPSLKLAANIYTTIFRGL-PELLTLFLVYFGVQI 84

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                 +            F++  +ALS   +++ +E   S    +P+GQ E   ALGL+
Sbjct: 85  AIQEFIKLLGYDIYFEVNSFVAGMVALSLVFSSYASEAFLSAFNGIPQGQYEGGYALGLS 144

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R ++LPQ +R  +P L + +L LLK +SL   +G ADLV   G     T +    
Sbjct: 145 RYKTMRFIILPQLIRLALPALGNLWLILLKETSLVSVIGLADLVREAGIAARVTKEPFLF 204

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
             + + IYL L+++ ++ + R+  
Sbjct: 205 FGLVLVIYLLLTMISSVGLLRIER 228



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G + T  LA + +    I+G L+   + S+   +     +Y  +FR +P L+ 
Sbjct: 15  WGDTIASGVLITVSLALATLPIGLILGFLIALAKKSSEPSLKLAANIYTTIFRGLPELLT 74

Query: 145 IFFLYKSV 152
           +F +Y  V
Sbjct: 75  LFLVYFGV 82


>gi|254245480|ref|ZP_04938801.1| Glutamine ABC transporter [Burkholderia cenocepacia PC184]
 gi|124870256|gb|EAY61972.1| Glutamine ABC transporter [Burkholderia cenocepacia PC184]
          Length = 252

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V    LG+ ++L              + L L +I  F       + ++ L +  +F  PV
Sbjct: 53  VLGVALGVAMALARG---------PARVLLLAFIGFFR-----AIPVLMLIFWTYFLMPV 98

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   N        P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT  + 
Sbjct: 99  LLHMNV-------PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQT 151

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  V   + N+       I L 
Sbjct: 152 VRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLF 211

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              IYL L   +      L ++    ++
Sbjct: 212 VALIYLVLCTSLDGGARWLLSRGPRTQR 239


>gi|15903398|ref|NP_358948.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|182684457|ref|YP_001836204.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|15459002|gb|AAL00159.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|182629791|gb|ACB90739.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
          Length = 232

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 102/233 (43%), Gaps = 19/233 (8%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            + +   +    L+  + T+   A + +FS  LG++++       +  H        L+ 
Sbjct: 19  SMSYLFEILPSLLNGASTTVQVFALVLLFSIPLGVLIAFALQVHWKPLHY-------LIN 71

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  +++ G P L+ +   Y +                       +  IA     AA+ AE
Sbjct: 72  IYIWVMRGTPLLLQLIFIYYV-----------LPSIGIRLDRLPAAIIAFVLNYAAYFAE 120

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R G+  +PRGQ EAA  L  +     R ++LPQ  + ++P + ++ ++L+K++SL  A
Sbjct: 121 IFRGGIDTIPRGQYEAAKVLKFSPFDRVRYIILPQVTKIVLPSVFNEVMSLVKDTSLVYA 180

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G +DL+    T  N+    + + L    IYL L  ++ +   ++  K +   
Sbjct: 181 LGISDLILASRTAANRDASLVPMFL-AGAIYLILIGIVTIISKKVEKKYSYYR 232



 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 82  DSSYATAILVGFVN----TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
             SY   IL   +N    T  +    ++ +  +G L+        K + ++  +Y+ V R
Sbjct: 19  SMSYLFEILPSLLNGASTTVQVFALVLLFSIPLGVLIAFALQVHWKPLHYLINIYIWVMR 78

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
             P L+ + F+Y  + S+    D          LN 
Sbjct: 79  GTPLLLQLIFIYYVLPSIGIRLDRLPAAIIAFVLNY 114


>gi|298485705|ref|ZP_07003784.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298159731|gb|EFI00773.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 198

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 18/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V S +LG V     T L+R         +   Y S F    L          Q+  
Sbjct: 3   LCSIVVSVLLGFV-----TALARLSSSAVAFGIASFYASFFRGTPLLI--------QILL 49

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L Q   + G+       +  IALS    A+++EI R+G+I V  GQ EAA+AL L 
Sbjct: 50  IYLGLPQLGIVPGAI-----TAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALR 104

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE+
Sbjct: 105 PAQIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEM 164

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     +Y  +SI + L  +RL     
Sbjct: 165 LTTAAVLYWIMSIGLELLQSRLERHYG 191


>gi|194016486|ref|ZP_03055100.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
 gi|194011959|gb|EDW21527.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
          Length = 253

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 7/215 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   I +F+ ++G  L        R         L  +Y+S   I G P LV + + + 
Sbjct: 22  PTTLLIVLFATLIGSFLGFIL-AYFRIERIPVLHQLSAIYVSF--IRGTPILVQMFIVFY 78

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                      +     ++  + + LYI     TAA+ +EI RS L +VP  Q EAA ++
Sbjct: 79  GLPGVLATIGLD----ISMWNKLIFLYITYGLNTAAYFSEIFRSALSSVPASQYEAAASI 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R  L+PQA +  +P +    +NLL+N+SLA  +G  D++    T+     + 
Sbjct: 135 GLTKWQIYRRTLIPQAGKIALPNIGVAIVNLLQNTSLAFTLGVMDIIGKVQTLGALYYRV 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +E   I   I++ LS+++    + L   I   + +
Sbjct: 195 LEGYFIAAVIFIMLSLLLEKAFDLLEKWINTPKTR 229



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 35/106 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L     T  +     +  + +G ++   R+    ++  +  +YV   R  P LV +F ++
Sbjct: 18  LSALPTTLLIVLFATLIGSFLGFILAYFRIERIPVLHQLSAIYVSFIRGTPILVQMFIVF 77

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             +  VL      I +   +          T    +       S V
Sbjct: 78  YGLPGVLATIGLDISMWNKLIFLYITYGLNTAAYFSEIFRSALSSV 123


>gi|302551653|ref|ZP_07303995.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469271|gb|EFL32364.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           viridochromogenes DSM 40736]
          Length = 238

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 13/223 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +         +    ++ V S ++   +S     ++R       + L   Y   F   
Sbjct: 1   MTSGLWELVLKGVWVTIQLLVCSALMAAAVSFVVG-VARTHRLWIVRFLAGFYTEVF--R 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G   LV+I   + + F  P    +  +          +  +AL     A+ +EIVR  L 
Sbjct: 58  GTSALVMI---FWVFFVLPPAFGWQLV-------PLWAGTLALGLTYGAYGSEIVRGALS 107

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV   Q E  IAL  T  +  RL+LLPQA+  +IPP ++  + LLK ++L   +G  DL 
Sbjct: 108 AVDPAQKEGGIALSFTPWQRMRLILLPQAVPEMIPPFSNLLIELLKGTALVSIMGMGDLA 167

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  +     ++ EI    + IY  ++ ++   M  L  K+ 
Sbjct: 168 FSGNLVRLALQESAEIYTYILLIYFVIAFLLTRVMRGLEKKLK 210



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L     + A  +  +VG  R     +V ++   Y EVFR    LV+I
Sbjct: 6   WELVLKGVWVTIQLLVCSALMAAAVSFVVGVARTHRLWIVRFLAGFYTEVFRGTSALVMI 65

Query: 146 FFLYKSVLSVLPI 158
           F+++  +      
Sbjct: 66  FWVFFVLPPAFGW 78


>gi|284007898|emb|CBA73837.1| arginine ABC transporter, permease protein [Arsenophonus nasoniae]
          Length = 225

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 17/221 (7%)

Query: 194 FVLGIVLSLFATRLSRHFHEKT----------GKALPLLYISTFLIFGLPTLVLIA---- 239
            +LG++L++  T                     + LP L +  F+ +G    +++     
Sbjct: 1   MILGLLLAMLFTAWESIRWRPVALLGSCWVTLIRGLPELLVVLFVYYGTLQFIMLLGDGI 60

Query: 240 ---LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              + +     +     F           F     AL+   AA+ ++ +R  L A+P GQ
Sbjct: 61  DINIIFWHTTWQVDPEWFFPQNNQFDFIPFFCGVFALALLYAAYASQTLRGALKAIPSGQ 120

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            ++  ALGL        +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +I
Sbjct: 121 WQSGQALGLNRNVIFLRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSI 180

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +N+T +     LI   IYL+++++    + R+  +    E+
Sbjct: 181 VNRTQEPFTWYLIVALIYLAITLVSQFILRRIELRTTQFER 221


>gi|289626773|ref|ZP_06459727.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289648366|ref|ZP_06479709.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|330868474|gb|EGH03183.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 277

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/202 (28%), Positives = 99/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 69  GFLQGAALTLFVSVCSIVVSVAFGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 128

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 129 IYLGLPQIGIVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSAGQREAALALALRPAQIF 188

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V +PQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 189 WRVTVPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 248

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 249 VLYWIMSIGLELLQSRLERHYG 270


>gi|209546986|ref|YP_002278904.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538230|gb|ACI58164.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 224

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 7/223 (3%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +      +     +FV S VLG  L L    L R+   K   A   L   T +I G
Sbjct: 1   MYEFIDQLLYGLKNTILVFVLSCVLGTGLGLLIAIL-RNSRRKIIAA--SLQAYTAIIRG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L++I L Y               GG      F +   AL+   +A+ AEI R  + A
Sbjct: 58  VPELLIILLMYFGGTAL----LSAVFGGYVEINAFAAGVTALTIVFSAYAAEIFRGAINA 113

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +  GQ EAA++LGL   +   LV++PQ +   +P   +  ++L+K++SL   VG  D++ 
Sbjct: 114 IAPGQSEAAMSLGLPQWQIWLLVIIPQMVPIALPAFCNLCISLIKDTSLISVVGLTDVMR 173

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           V           +   L    IYL+L+ +  L    +    A+
Sbjct: 174 VAYVGAGSLRAPLPFYLAASAIYLTLTSLSLLSFKLIERHYAI 216



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT  +     +  T +G L+   R S  K++A   + Y  + R +P L++I  +
Sbjct: 8   LLYGLKNTILVFVLSCVLGTGLGLLIAILRNSRRKIIAASLQAYTAIIRGVPELLIILLM 67

Query: 149 YKSVL 153
           Y    
Sbjct: 68  YFGGT 72


>gi|253689073|ref|YP_003018263.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755651|gb|ACT13727.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 221

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 13/231 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   +   L    L      +    ++++ + VLG VL L    L R F ++       +
Sbjct: 1   MHYQWDFSLVWDNLPVLLKGLGVTLELWLLAGVLGTVLGLVFG-LFRVFGKRWLSLPARV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++  F     P L+ +      ++  PVL    F   +  +        A       +  
Sbjct: 60  FVEIF--RNTPVLIQLI---WFYYAFPVLVGIQFSTFAAAALALTLYSAA-------YCT 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+GL ++  GQ E A ALG+      R V+LPQ +R+++P LT++ + L K +SLA 
Sbjct: 108 EIFRAGLQSIDHGQWEGAKALGMRQAVILRRVVLPQVLRNMLPALTNRMIELAKVTSLAS 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   +L+  G  + +   + +EI+ +   +Y  L    +    RL  +  
Sbjct: 168 ILAVNELMYQGRLLSSTYYRPLEILTVVALLYFILIWPGSYLAARLERRFR 218



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 35/76 (46%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++        +L G   T  L     +  T++G + G  R+   + ++   RV+VE+FR
Sbjct: 6   DFSLVWDNLPVLLKGLGVTLELWLLAGVLGTVLGLVFGLFRVFGKRWLSLPARVFVEIFR 65

Query: 138 NIPPLVVIFFLYKSVL 153
           N P L+ + + Y +  
Sbjct: 66  NTPVLIQLIWFYYAFP 81


>gi|301799826|emb|CBW32397.1| putative glutamine transporter [Streptococcus pneumoniae OXC141]
          Length = 378

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 5/168 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +          I +    LG +L +      +    K    L  LY+  F   G 
Sbjct: 9   PKYLPYFNYGAVVTILISICVIFLGTILGVVL-AFGQCSKFKPLVWLANLYVWIF--RGT 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V I + + L        Q   +G        +   + +S  + A+++E VR+G+ AV
Sbjct: 66  PMMVQIMIAFALMHINAPTIQIGILG--VDFSRLIPGILIISMNSGAYVSETVRAGINAV 123

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           P+GQ+EAA +LG+  + A R V+LPQA+++I+P L ++++ ++K+SSL
Sbjct: 124 PKGQLEAAYSLGIRPKNAMRYVILPQAVKNILPALGNEFITIIKDSSL 171



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T  ++   +   TI+G ++  G+ S  K + W+  +YV +FR  P +V 
Sbjct: 11  YLPYFNYGAVVTILISICVIFLGTILGVVLAFGQCSKFKPLVWLANLYVWIFRGTPMMVQ 70

Query: 145 IFFLYKSVLSVLPIPD 160
           I   +  +    P   
Sbjct: 71  IMIAFALMHINAPTIQ 86


>gi|153952019|ref|YP_001398496.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939465|gb|ABS44206.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. doylei 269.97]
          Length = 233

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 10/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+  F  +  +++ LF   +S +F  K  + +  LYI        P L+ +   Y 
Sbjct: 18  WLTIKLSFFGIIFSLIIGLFCILMS-YFKIKILENICKLYIEF--SRNTPLLIQLFFLYY 74

Query: 244 LHF-------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                       P L         T+ P F    + LS    +++AE +R+G  A+ + Q
Sbjct: 75  ALPKFNIHLEQIPPLSLICLSVEETLIPSFACAIVGLSFLGGSYMAESLRAGFEAIRKHQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA ++LG +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++
Sbjct: 135 FEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSL 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + T +  E++ +    YL + + ++  + +   ++
Sbjct: 195 NSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 37/78 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVL 165
           LY ++       +    L
Sbjct: 72  LYYALPKFNIHLEQIPPL 89


>gi|84515669|ref|ZP_01003030.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Loktanella vestfoldensis SKA53]
 gi|84510111|gb|EAQ06567.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Loktanella vestfoldensis SKA53]
          Length = 497

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 18/261 (6%)

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           P   +       +L  L      ++     +  +       L +       V S  LGI 
Sbjct: 252 PLGAIGVDGLFPLLPQLRGALDGVMPWGLPYTASENFGGFMLAIIIGTSGIVLSLPLGIA 311

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
           L+L      R       K + + +I   +I G+P +V +     L           F+  
Sbjct: 312 LAL-----GRQSSMPLIKWVCVSFIE--VIRGVPLIVWLFTASTL--------LNYFLPP 356

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
            T     + + I ++ + +A++AE+VR GL A+P+GQ EAA +LGL + K+ RL++LPQA
Sbjct: 357 GTTFDLLLRVIIMVTLFASAYLAEVVRGGLAALPKGQYEAADSLGLDYWKSMRLIILPQA 416

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLS 376
           ++  IP + + ++ L K+++L V +G  D + +   I       G   E+ +    ++  
Sbjct: 417 LKISIPGIVNTFIGLFKDTTLVVFIGLRDPLGLTNAIRATSEWNGIYWELYIFVGGLFFM 476

Query: 377 LSIMIALFMNRLNAKIALKEK 397
               ++ +   L  ++    +
Sbjct: 477 FCFFMSRYSMYLERRLRTDHR 497


>gi|325570407|ref|ZP_08146184.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
 gi|325156617|gb|EGC68794.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus casseliflavus ATCC 12755]
          Length = 218

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 109/226 (48%), Gaps = 19/226 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        +    +T++ +    +FSF++G +  +        F +  G          
Sbjct: 7   FSAINIRFLIDGLRVTVEVSILSILFSFIIGGIAGILRFSSIPVFSKVLG---------- 56

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +I  +  L L+ + +  +F  P +G    I        F S  +AL+ + +A ++EI R
Sbjct: 57  VVIDVIRNLPLLLIIFFTYFALPQIGIRFNI--------FWSAVVALTIFESAMLSEIFR 108

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL AVP+GQMEA ++ GL++ +  R +++PQA ++++P + SQ ++L+K++SLAV +  
Sbjct: 109 AGLNAVPKGQMEAGLSTGLSYVEVLRSIVVPQAFKAMLPAIVSQLISLIKDTSLAVIISL 168

Query: 347 ADLVSVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L      I  Q T   + + L    +Y  +   ++L    L  +
Sbjct: 169 PELTHHARIIYGQNTNYVLPMFLAMTVLYFLVCYALSLLSGFLEKR 214



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 44/101 (43%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             ++ G   T  ++   ++ + IIG + G  R S+  + + +  V ++V RN+P L++IF
Sbjct: 13  RFLIDGLRVTVEVSILSILFSFIIGGIAGILRFSSIPVFSKVLGVVIDVIRNLPLLLIIF 72

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F Y ++  +    +        + +    +         NA
Sbjct: 73  FTYFALPQIGIRFNIFWSAVVALTIFESAMLSEIFRAGLNA 113


>gi|226322422|ref|ZP_03797940.1| hypothetical protein COPCOM_00193 [Coprococcus comes ATCC 27758]
 gi|225209144|gb|EEG91498.1| hypothetical protein COPCOM_00193 [Coprococcus comes ATCC 27758]
          Length = 214

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 94/218 (43%), Gaps = 13/218 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     I V    +G ++      L +  + K GKA+  +YI  ++I   P +
Sbjct: 10  LPMMFEGLKLTILIAVVGITIGFLIGSLCGYLLQSKY-KIGKAIAEVYI--WIIRATPLM 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V     Y   F  P L   +    +            ++  + AFI+EIV+  L+++  G
Sbjct: 67  VQALYGY---FVIPKLLGVDIGSTAV-------GIGVIALNSGAFISEIVKGALMSIDPG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA  +LGLT  +    +++P A ++ +P L +Q++  +K+++L  A+   ++      
Sbjct: 117 QKEAGASLGLTSAQTMIHLVIPPAFKAALPALFNQFIISVKDTALLSAIAVNEITHQAQA 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               + +AI         YL +  ++ +   ++  K+ 
Sbjct: 177 YAALSFKAIPTYTALAAFYLVILSVLIIVQKQIERKMR 214



 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  +A  G+    +IG+L G    S  K+   I  VY+ + R  P +V   + 
Sbjct: 13  MFEGLKLTILIAVVGITIGFLIGSLCGYLLQSKYKIGKAIAEVYIWIIRATPLMVQALYG 72

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 73  YFVIPKL 79


>gi|86151590|ref|ZP_01069804.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|121612476|ref|YP_001000174.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|167005132|ref|ZP_02270890.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85841219|gb|EAQ58467.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|87250268|gb|EAQ73226.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 233

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 100/216 (46%), Gaps = 10/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+  F  +  +++ LF   +S +F  K  + +  LYI        P L+ +   Y 
Sbjct: 18  WLTIKLSFFGIIFSLIIGLFCILMS-YFKIKILENICKLYIEF--SRNTPLLIQLFFLYY 74

Query: 244 ------LHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                 +H +  P L         T+ P F      LS    +++AE +R+G  A+ + Q
Sbjct: 75  ALPKFNIHLEQIPPLDLICLSVEETLRPSFACAIAGLSFLGGSYMAESLRAGFEAIRKQQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA ++LG +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++
Sbjct: 135 FEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSL 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + T +  E++ +    YL + + ++  + +   ++
Sbjct: 195 NSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLD 90


>gi|330942300|gb|EGH44928.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 277

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/133 (35%), Positives = 76/133 (57%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            V     +  IALS    A+++EI R+G+I V  GQ EAA+AL L   +    V LPQAM
Sbjct: 138 IVPGAITAGVIALSLNYGAYLSEIFRAGIIGVSVGQREAALALALRPAQIFWRVTLPQAM 197

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++     +Y  +SI 
Sbjct: 198 RTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAAVLYWIMSIG 257

Query: 381 IALFMNRLNAKIA 393
           + L  +RL     
Sbjct: 258 LELLQSRLERHYG 270


>gi|189023947|ref|YP_001934715.1| Tetracycline resistance protein [Brucella abortus S19]
 gi|189019519|gb|ACD72241.1| Tetracycline resistance protein [Brucella abortus S19]
          Length = 289

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L+  V  V+             ++         +T+  +      S  LGI
Sbjct: 40  IPKKGLNAILFFLVFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGI 99

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I       L T++ +A      F  P         
Sbjct: 100 VLAL-----GRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP--------- 145

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 + +   I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQ
Sbjct: 146 -GVTFDKLLRALIGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQ 204

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +     +             ++   F+
Sbjct: 205 ALKLVIPGIVNTFIGLFKDTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFV 264

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +   +  ++    K+
Sbjct: 265 FWIFCFAMSRYSIFMERRLDTGHKR 289



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 76  LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 135

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 136 SVMLPLFLPP 145


>gi|170767831|ref|ZP_02902284.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia albertii TW07627]
 gi|170123319|gb|EDS92250.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia albertii TW07627]
          Length = 246

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLAMTLVERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|148559776|ref|YP_001259773.1| amino acid ABC transporter permease [Brucella ovis ATCC 25840]
 gi|256370355|ref|YP_003107866.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
 gi|148371033|gb|ABQ61012.1| amino acid ABC transporter, permease protein [Brucella ovis ATCC
           25840]
 gi|256000518|gb|ACU48917.1| amino acid ABC transporter, permease protein [Brucella microti CCM
           4915]
          Length = 281

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 14/261 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR   P      +   + +   I      + F +             + TN  I + + +
Sbjct: 34  FRQTCPSGSPVSVTARMTNHPTITSKETTMDFSVSALGGAFPQLLPAIGTNLVISIIAMI 93

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L ++     T L R        A+  + IS   I G P LV I L Y   +  P L    
Sbjct: 94  LALIGGTALTIL-RTLGIAPLNAVIGVVISF--IRGTPILVQIFLFY---YGLPAL---- 143

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G  +SP   +  +A++  ++ FI EI+R GL  +  G +EAAIALG+  +     V+
Sbjct: 144 ---GLDLSP-IQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWTKVI 199

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ    I+PPL ++   ++K ++L   +   +++     + N + + +E +L    I  
Sbjct: 200 LPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETLLCAAIILF 259

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           +++++++     L  + A + 
Sbjct: 260 AVNLVLSQCGRVLEMRFAARR 280



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 8/191 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L        ++   MI A I GT +   R      +  +  V +   R  P LV IF  
Sbjct: 77  LLPAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISFIRGTPILVQIFLF 136

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFAT 205
           Y  + ++             +  N+       +       ++     +  LGI   +  T
Sbjct: 137 YYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWT 196

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           ++     +   + +P L      I     L+ +    ++      +   +F    T+   
Sbjct: 197 KV--ILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETL--- 251

Query: 266 FMSLYIALSCY 276
             +  I  +  
Sbjct: 252 LCAAIILFAVN 262


>gi|319948858|ref|ZP_08022971.1| putative ABC transporter permease protein [Dietzia cinnamea P4]
 gi|319437460|gb|EFV92467.1| putative ABC transporter permease protein [Dietzia cinnamea P4]
          Length = 214

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 24/214 (11%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                   V  F++   L L    L R            L + T  I   P +V +   Y
Sbjct: 21  FRITLLATVVGFLIAAALGLVVAVLRRAAPAVI---TVPLRMVTEFIRLTPLVVQLLFAY 77

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC---YTAAFIAEIVRSGLIAVPRGQMEA 299
            L                   P+F +L I +     + A ++AE+ R+G+ AVPRGQ EA
Sbjct: 78  FL------------------LPQFTALQIGIGVIGVHYATYMAEVYRAGIDAVPRGQWEA 119

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A AL L   +  R V+LPQA+R+ +P L +  ++L K++    A+   ++V+       +
Sbjct: 120 AQALSLPAGRTWRAVVLPQAIRNTVPALGNYAISLFKDTPFLFAITVVEMVTAAQQYGAR 179

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             Q +E I +   I+L  S   ++ + RL   +A
Sbjct: 180 NFQYLEPITLAGVIFLLASYPTSILIRRLEKSLA 213


>gi|315124013|ref|YP_004066017.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315017735|gb|ADT65828.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 233

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 108/237 (45%), Gaps = 14/237 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTG 216
           +   F +      L+   LT+  +    +FS ++G+   L +    +        + +  
Sbjct: 1   MDFDFILVQAPVFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL    FL + LP       K+ +H +  P L         T+ P F      LS 
Sbjct: 61  RNTPLLIQLFFLYYALP-------KFNIHLEQIPPLDLICLSVEETLRPSFACAIAGLSF 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              +++AE +R+G  A+ + Q EA ++LG +     R V+LPQA+   +P +++  + L+
Sbjct: 114 LGGSYMAESLRAGFEAIRKQQFEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLI 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           K +S+   +   DLV++  ++ + T +  E++ +    YL + + ++  + +   ++
Sbjct: 174 KETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 36/79 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  VFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLD 90


>gi|302337319|ref|YP_003802525.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634504|gb|ADK79931.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 219

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 18/230 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +++ F        L      +  +    +F+ ++G+V+ +      R+ H+     +  +
Sbjct: 4   MLIRFVTRNFRFYLEGLETALSASIISLLFALIIGLVVGII-----RYSHKGILGTIAKI 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S   I   P LV +   Y + F  P L          V   F +  I LS  + A+IA
Sbjct: 59  YVSA--IRNTPLLVQL---YFVFFGLPRL--------GIVLSAFQTGVIGLSFNSGAYIA 105

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+V++G  A+PRGQ+EAA ++GL+  +  RL+L+PQA   I+P +  Q + L+K++ L  
Sbjct: 106 EMVKAGFQAIPRGQIEAAESIGLSVHQRFRLILIPQAALQIVPAVGGQMVQLIKDTCLLS 165

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   ++      + N+T   ++  L    IYL +++++ + ++    KI
Sbjct: 166 LLAITEITKAATEVGNKTYMFLQAFLFAGIIYLIVNMLLNIAIDLFERKI 215



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L G       +   ++ A IIG +VG  R S   ++  I ++YV   RN P LV +
Sbjct: 13  FRFYLEGLETALSASIISLLFALIIGLVVGIIRYSHKGILGTIAKIYVSAIRNTPLLVQL 72

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +F++  +  +  +         G+  N+       +     A 
Sbjct: 73  YFVFFGLPRLGIVLSAFQTGVIGLSFNSGAYIAEMVKAGFQAI 115


>gi|260598728|ref|YP_003211299.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Cronobacter turicensis z3032]
 gi|260217905|emb|CBA32479.1| Histidine transport system permease protein hisQ [Cronobacter
           turicensis z3032]
          Length = 228

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 9/229 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLI 229
            +   L    +T++      V S  +G+V +    +LSR+      + L L++   T LI
Sbjct: 5   FSQVILQGALVTLELALSAVVLSVAIGLVGA--GAKLSRN------RPLALVFEAYTTLI 56

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G+P LVL+ L +                        ++  I L     A+  E  R   
Sbjct: 57  RGVPDLVLMLLIFYGLQIALNSVTDALGFSQFDIDPMIAGIITLGFIYGAYFTETFRGAF 116

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVPRG +EAA A G T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+
Sbjct: 117 LAVPRGHIEAATAFGFTGSQTFRRILFPSMMRYALPGIGNNWQVILKATALVSLLGLEDV 176

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V         T Q     ++   IYL  + +    +  L  +  +  K+
Sbjct: 177 VKATQLAGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLERRYTVGVKR 225



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 36/68 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL G + T  LA S ++ +  IG +    +LS N+ +A +   Y  + R +P LV+
Sbjct: 5   FSQVILQGALVTLELALSAVVLSVAIGLVGAGAKLSRNRPLALVFEAYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|262043353|ref|ZP_06016481.1| histidine transport system permease HisQ [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259039305|gb|EEW40448.1| histidine transport system permease HisQ [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 235

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L A   ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 22  VTLELALSSVVLAVLIGL-AGAGAKLSSNRPLALVFEGY--TTLIRGVPDLVLMLLIFYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 79  LQIALNSVTDVLGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKGHIEAATAFG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 139 FSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 198

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  +  +  K+
Sbjct: 199 YFAIVCGLIYLVFTTVSNGVLLLLERRYTVGVKR 232



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL G + T  LA S ++ A +IG      +LS+N+ +A +   Y  + R +P LV+
Sbjct: 12  FSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLSSNRPLALVFEGYTTLIRGVPDLVL 71

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 72  MLLIFYGL 79


>gi|260459413|ref|ZP_05807668.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259034967|gb|EEW36223.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 239

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 102/239 (42%), Gaps = 4/239 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                +     +  +         +     + + +  +G+ +  F   L +   E + + 
Sbjct: 1   MPAQSIWTLLSWGPDGWSDDIAYGIVVTVLLALATLPIGLTIGFFI-ALGKQSEEPSLRL 59

Query: 219 LPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              +Y + F   GLP LV L    + +      L ++     +     F++  I LS   
Sbjct: 60  AANIYTTVF--RGLPELVTLFLFFFGVPILLQHLIRYFRPEATIDVNSFVAGMIVLSLIF 117

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +++ +E+  S   A+P+GQ E   A+GL++ +  R V+LPQ +R   P L + +L+LLK+
Sbjct: 118 SSYASEVFLSAFRAIPKGQYEGGYAIGLSYGQTMRKVILPQLLRIAFPGLENCWLSLLKD 177

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SL   VG A+ +   G     T  +     +   ++L L+I+ +   + +   +   E
Sbjct: 178 TSLVSVVGLAETLRNAGVAARVTKHSFLFYGVAALVFLGLAIVSSFATSAILRSLGKWE 236



 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 70/207 (33%), Gaps = 29/207 (14%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             ++  I  G V T  LA + +     IG  +  G+ S    +     +Y  VFR +P L
Sbjct: 15  DGWSDDIAYGIVVTVLLALATLPIGLTIGFFIALGKQSEEPSLRLAANIYTTVFRGLPEL 74

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG-IVLS 201
           V +F  +  V                       L          A I V SFV G IVLS
Sbjct: 75  VTLFLFFFGV--------------------PILLQHLIRYFRPEATIDVNSFVAGMIVLS 114

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L  +  +        +A+P                 I L Y     K +L Q   I    
Sbjct: 115 LIFSSYASEVFLSAFRAIPKGQYEGGYA--------IGLSYGQTMRKVILPQLLRIAFPG 166

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +   ++SL    S  +   +AE +R+ 
Sbjct: 167 LENCWLSLLKDTSLVSVVGLAETLRNA 193


>gi|295109555|emb|CBL23508.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus obeum A2-162]
          Length = 215

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 96/222 (43%), Gaps = 12/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L   T+       IF  + +  + L +      R    K    +   YIS  ++ G P 
Sbjct: 6   MLQQLTVGFGQTLLIFCLTLLFSLPLGMVVY-FGRVSRFKPLSWIIKAYIS--IMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ + L Y   F    +   N+        +F ++ +  S   AA+ AEI RSG+ ++  
Sbjct: 63  MLQLLLWYFGPFYLWGMNIGNY--------KFTAIILGCSLNYAAYFAEIYRSGIESILV 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG    +    ++LPQ ++ ++P +T++ + L+K++SL  +V + ++ ++  
Sbjct: 115 GQYEAAQLLGYNKSQTFFKIVLPQVVKIVLPSVTNEVITLVKDTSLVYSVSYIEMFALAK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            I       +   +I    Y   + ++A  M     K+    
Sbjct: 175 QIAAA-QTTVIPFVIAGVFYYIFNFVVAWVMEWFEKKLNYYR 215



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 34/73 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              + VGF  T  +    ++ +  +G +V  GR+S  K ++WI + Y+ + R  P ++ +
Sbjct: 7   LQQLTVGFGQTLLIFCLTLLFSLPLGMVVYFGRVSRFKPLSWIIKAYISIMRGTPLMLQL 66

Query: 146 FFLYKSVLSVLPI 158
              Y     +  +
Sbjct: 67  LLWYFGPFYLWGM 79


>gi|251789978|ref|YP_003004699.1| arginine transporter permease subunit ArtM [Dickeya zeae Ech1591]
 gi|247538599|gb|ACT07220.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 223

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 85/185 (45%), Gaps = 5/185 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
                L   YI+ F   G P LV I L Y        + + +++      P ++    AL
Sbjct: 42  PVLSMLAKGYITLFT--GTPLLVQIFLIYYGPGQFESIRRIDWLWSLLSQP-WLCAVSAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++ R+    +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPSGQWQSCAALGMSQRQTL-RILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K +SLA  +   +++  G  +  +T   + +      +YL ++ ++ L M  +  +  
Sbjct: 158 VFKGTSLAYTITLMEVMGYGQLLYGRTYDVL-VFGAAGIVYLCVNGLLTLLMRLVERRAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 RFEQR 221


>gi|227114776|ref|ZP_03828432.1| histidine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 229

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 72/175 (41%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T LI G+P LVL+ L +            +            +  I L     A+  E
Sbjct: 51  CYTTLIRGIPDLVLMLLIFYGLQIVLNGVTESIGLDQIDIDPLTAGIITLGFIYGAYFTE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + +  +LK ++L   
Sbjct: 111 TFRGAYLAVPRGQIEAAVAFGFSPMKVFRRILFPSMMRFALPGIGNNWQVILKATALVSL 170

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  D++         T +     L+   +YL  + +    +  L    +   KK
Sbjct: 171 LGLNDVIKATQLAGKGTHEPFYFALVAGAMYLIFTTVSNGVLWWLERHYSQGVKK 225


>gi|153954684|ref|YP_001395449.1| hypothetical protein CKL_2066 [Clostridium kluyveri DSM 555]
 gi|219855153|ref|YP_002472275.1| hypothetical protein CKR_1810 [Clostridium kluyveri NBRC 12016]
 gi|146347542|gb|EDK34078.1| Hypothetical protein CKL_2066 [Clostridium kluyveri DSM 555]
 gi|219568877|dbj|BAH06861.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 236

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 95/240 (39%), Gaps = 17/240 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS------LFATRLSRHFHEKTGKA 218
           + + +      +S   +T+       + + V+G++ S      +F      HF     K 
Sbjct: 5   MEYMIQCIKPIISKFPITLYMAVTATILALVVGLIFSVIVKKNIFLLSKVIHFINSFLKG 64

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +P+L I   L + +PT++             +     F       P+ M    A      
Sbjct: 65  IPVLVILYILYYSMPTIL-----------VSLGDSLGFKYDIKNPPKLMFGIFAFGITYI 113

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            ++ +++ S    +PRGQ EA  ++G T  +  + +++PQ +   +P   + ++N+LK +
Sbjct: 114 PYMCDMIISAYDTIPRGQTEACDSIGFTTFQTMQKIIIPQMVVVCVPIFGNHFVNILKAT 173

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           SLA  V   +++         T + +E  ++   IY  + I        + A      +K
Sbjct: 174 SLAYMVSIIEMMGAAKNYATGTQRFMETYIVAALIYWIICIAFDKLFALIEANTGKYRRK 233


>gi|329997346|ref|ZP_08302729.1| arginine/ornithine transport protein [Klebsiella sp. MS 92-3]
 gi|328539095|gb|EGF65131.1| arginine/ornithine transport protein [Klebsiella sp. MS 92-3]
          Length = 235

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L A   ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 22  VTLELALSSVVLAVLIGL-AGAGAKLSSNRPLALVFEGY--TTLIRGVPDLVLMLLIFYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 79  LQIALNSVTDALGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKGHIEAATAFG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 139 FSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 198

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  +  +  K+
Sbjct: 199 YFAIVCGLIYLVFTTVSNGVLLLLERRYTVGVKR 232



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL G + T  LA S ++ A +IG      +LS+N+ +A +   Y  + R +P LV+
Sbjct: 12  FSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLSSNRPLALVFEGYTTLIRGVPDLVL 71

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 72  MLLIFYGL 79


>gi|311895158|dbj|BAJ27566.1| putative glutamate ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 214

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 18/225 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +        T+       V + VLG V++ F     R    K  +     +++      
Sbjct: 8   WSTYWHGFLGTLWLTLVSAVLALVLGAVVAGF-----RVSPVKPLRVFGTGWVTVLRNTP 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L  L  I +                       P F    +AL CYT+AF+ E +RSG+  
Sbjct: 63  LTLLFFIVV-------------LGLPRFDITLPFFTFAVLALGCYTSAFVCETLRSGVNT 109

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ EAA +LGLT  +  RLV+LPQA RS++ PL S  + L KN+++A +    +L+ 
Sbjct: 110 VPTGQGEAARSLGLTFGQTLRLVVLPQAYRSVVAPLGSVMIALAKNTAIAGSFSVVELLG 169

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              TI       +   +     YL L++ I+   N L  ++A+  
Sbjct: 170 TYRTINELGYDIVWTFVWIAAGYLVLTLAISALFNLLERRVAVSR 214



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 30/72 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            +    GF+ T WL     + A ++G +V   R+S  K +      +V V RN P  ++ 
Sbjct: 8   WSTYWHGFLGTLWLTLVSAVLALVLGAVVAGFRVSPVKPLRVFGTGWVTVLRNTPLTLLF 67

Query: 146 FFLYKSVLSVLP 157
           F +   +     
Sbjct: 68  FIVVLGLPRFDI 79


>gi|222102717|ref|YP_002539756.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221739318|gb|ACM40051.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 240

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 2/238 (0%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +        F +             + KI + ++++G+VL L    +++       ++  
Sbjct: 4   NMAWFTLLSFGDQGWSDELLQGAWLSIKISLSAYLIGLVLGLVG-AIAKLSKSVVARSFA 62

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             Y +T +      LV+  + Y        L   + +        F++  I+L      +
Sbjct: 63  GTY-TTVIRSVPDILVIFLIYYSATDALSYLLSMSGLSVEFQLNGFIAAAISLGVVQGGY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E++R  ++AV RGQ EAA A+GLT ++A  LV++PQ +   +P L + +L +LK SSL
Sbjct: 122 STEVLRGAIVAVARGQTEAAFAVGLTRKQAFFLVIIPQMLPLALPGLGNLWLIVLKESSL 181

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +GF +LV VG      T   +        ++L +S    L  + L  K +L  ++
Sbjct: 182 VSLIGFTELVLVGKMAAGATRHYLLFYAAVGVVFLIMSGASTLVFHYLEVKTSLTWRR 239


>gi|85705013|ref|ZP_01036113.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670335|gb|EAQ25196.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 261

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 9/234 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                + L      +     I V + VLG  L++    L++        A   ++ +  +
Sbjct: 32  WDWLPQYLPLALEGLWRTIWILVVTVVLGFTLAVPLG-LAQAAGPWYLAAPARIFCT--I 88

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEI 284
           I G P L+ I L Y  +    +  Q+ +I GS + P     +    +AL+   A +  E+
Sbjct: 89  IRGTPLLLQIWLLY--YGLGSLFPQYPWIRGSELWPYLRQAWPYAVLALTLSYAGYEGEV 146

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G  +V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   +
Sbjct: 147 MRGGFASVQKGQLEAARAFGMPRFTIFRRIWLPQAIRNVLPTLGGETILQLKATPLVATI 206

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++ SV   +   T    E +L+   +Y+ ++ +IAL    +  ++  + ++
Sbjct: 207 TVIEIYSVSNRVRADTFIVYEPLLLLALVYMIIAGLIALMFRWVENRVPTRRQQ 260



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T W+    ++    +   +G  + +    +A   R++  + R  P L+
Sbjct: 37  QYLPLALEGLWRTIWILVVTVVLGFTLAVPLGLAQAAGPWYLAAPARIFCTIIRGTPLLL 96

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            I+ LY  + S+ P            +L      
Sbjct: 97  QIWLLYYGLGSLFPQYPWIRGSELWPYLRQAWPY 130


>gi|302188037|ref|ZP_07264710.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. syringae 642]
          Length = 218

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 18/230 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
                      L     ++   A   ++   +G+ L++      +            ++ 
Sbjct: 5   FSNWSVWLPELLEGYKFSLQICALALLWGVPVGLFLAIGTDSKIKMLR---------IFS 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +  G    VLI L++  +F  P +                +  +AL   TAA+ +EI
Sbjct: 56  ICIVELGRGAPVLILLQF-FYFGLPNVH--------VSLSSAAASILALGWSTAAYTSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL AVP GQ EAA+ LGL    A R+V++PQAMR  +PPL    L +L+ +SL   +
Sbjct: 107 IRGGLKAVPPGQREAAVTLGLAPATAMRIVIVPQAMRICLPPLLGFALVMLQTTSLCFTI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              ++VS    I + T Q + ++++   +Y ++ I   + ++++  +++ 
Sbjct: 167 ALPEIVSRANEIGSATFQYMSVLMLTGLMYAAVCIPATIVVSQMERRLSR 216


>gi|261821245|ref|YP_003259351.1| arginine transporter permease subunit ArtM [Pectobacterium wasabiae
           WPP163]
 gi|261605258|gb|ACX87744.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 222

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 84/185 (45%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT     L  +   L  G P LV I L Y        + Q  ++      P ++   +AL
Sbjct: 40  KTPVVSLLAKVYITLFTGTPLLVQIFLIYYGPGQFTAIQQIPWLWNLLSQP-WLCAMVAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG+  ++    +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVKAIPAGQWQSCAALGMDQKQTL-RILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K++SLA  +   +++     +  +T   + +      IYL ++ ++ L M  +  +  
Sbjct: 158 VFKSTSLAYTITLMEVMGYSQLMYGRTYDVM-VFGAAGIIYLCVNGLLTLLMRWVERRSL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 AFERR 221


>gi|28870259|ref|NP_792878.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|28853506|gb|AAO56573.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 219

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 17/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS V G+   +  +   R            L I   L   +P LV + L +   F
Sbjct: 28  LLAIVFSSVGGLCYGVLRSLGKRWLEIP-------LRIYLELFRAIPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + LS + A+ + E+VR GL ++PRGQ EA +A+GL 
Sbjct: 78  GLPIFFGLSI-------PAFWCAVLVLSLWGASEVGEVVRGGLRSIPRGQREAGLAIGLG 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP+ + Y  L+K SSLAV +G  D+  VG  II +T +++ I
Sbjct: 131 LGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLAVLIGVIDITKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   ++     L  +
Sbjct: 191 YGFLFLFFFIVCYPLSAASRVLEGR 215



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ +++ G   G  R    + +    R+Y+E+FR IP LV ++  
Sbjct: 16  LITGAGRTLGISLLAIVFSSVGGLCYGVLRSLGKRWLEIPLRIYLELFRAIPVLVWLYLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|260461177|ref|ZP_05809426.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033211|gb|EEW34473.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 237

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V  F+LG +    A    R         +   Y + F       L +  L Y  
Sbjct: 25  VTFALSVLGFLLGALFGAVA-AGGRLSTRALPSWVAKGYGTVFRGVPD-LLTIYLLYYGG 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G+F    G    P F +  +A+   + A+ AE+ R   +AV  GQ EA+ ALG
Sbjct: 83  SIALTEIGKFFGSAGFVGLPTFATGVLAIGIISGAYQAEVYRGAYLAVDLGQFEASKALG 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  ++ RLV++PQ MR  +P L + +  +LK+S+L   +G  +L+           +  
Sbjct: 143 LSRFQSLRLVIVPQLMRHALPGLGNVWQLVLKDSALISVIGLVELMRQSQIGAGSMREPF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +Y  ++ +         A+
Sbjct: 203 VFYVAAATLYFLIAAVTGSVFRYGEAR 229



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L+    TF L+  G +   + G +   GRLS   L +W+ + Y  VFR +P L+ 
Sbjct: 15  WGGALLLAAGVTFALSVLGFLLGALFGAVAAGGRLSTRALPSWVAKGYGTVFRGVPDLLT 74

Query: 145 IFFLYKSV 152
           I+ LY   
Sbjct: 75  IYLLYYGG 82


>gi|239820264|ref|YP_002947449.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805117|gb|ACS22183.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 264

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 98/249 (39%), Gaps = 15/249 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
             +   +      +            F +    R L    L       +      L + +
Sbjct: 24  LALAGAWALVKHFAGASAASAGYDWDFAVLWKYRSLLISGLLYTLLFTVVCVVLGLLVGV 83

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
                RLS + +         L     +    P LV +      ++  PVL         
Sbjct: 84  VTGLGRLSTNPYI-----TAPLRAYIEVFRCTPVLVQLV---WFYYALPVLTGLEL---- 131

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +  + L+ Y  AF +EIVR G+I++  GQ EA  ALG+T  +  R +LLPQA 
Sbjct: 132 ---SATAAATLCLTLYGGAFYSEIVRGGIISIEAGQTEAGKALGMTRLQLLRRILLPQAF 188

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + ++PPL SQ +  LKN+SL   +   DL+  G  I + T + +E+       Y ++ + 
Sbjct: 189 KKMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIAHDTYRPLELYTFIAIAYFAVLLP 248

Query: 381 IALFMNRLN 389
           I ++  R+ 
Sbjct: 249 ITIWAKRME 257


>gi|148257735|ref|YP_001242320.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp.
           BTAi1]
 gi|146409908|gb|ABQ38414.1| amino acid ABC transporter ATP-binding protein, PAAT family / amino
           acid ABC transporter membrane protein, PAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 536

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 6/164 (3%)

Query: 232 LPTLVLIALKYQLHF-DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIV 285
              L  IA  Y + F   P++ Q  F   +           ++  +AL+C  A FIAE++
Sbjct: 46  FWLLAAIARGYTVIFRGTPLILQMVFAYDALPHIGIKLPAVLAAGLALACNEAPFIAEML 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG++ V RGQ+ A  ALG+T     R ++ PQA+R++IP   ++ ++ LKNSSLA  + 
Sbjct: 106 RSGVLGVDRGQLLAGQALGMTPGVLMRRIIAPQAIRTMIPAFGNEAVSALKNSSLASVIA 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             +L      + + T     I      IYL L+  I++    L 
Sbjct: 166 VQELTLRSTQLASSTFDFFSIFFASGLIYLVLTGAISVIQLALE 209



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 3/131 (2%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L+G   T  +   G+I   ++G ++   +LS   L+A I R Y  +FR  P ++ + F
Sbjct: 12  YLLMGIELTLQVTALGLIGGLLLGIILAGMQLSRFWLLAAIARGYTVIFRGTPLILQMVF 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM---DTNAKIFVFSFVLGIVLSLFA 204
            Y ++  +       +     +  N        L       +    +    LG+   +  
Sbjct: 72  AYDALPHIGIKLPAVLAAGLALACNEAPFIAEMLRSGVLGVDRGQLLAGQALGMTPGVLM 131

Query: 205 TRLSRHFHEKT 215
            R+      +T
Sbjct: 132 RRIIAPQAIRT 142


>gi|315605385|ref|ZP_07880428.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312954|gb|EFU61028.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 225

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 22/209 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   V S +LG+ + L              +  PL ++    +  +  +  + L +  +F
Sbjct: 30  ALSVVLSLILGVFVGLGMRS----------RWRPLRWLMQLYLEFVRIMPQLVLLFVAYF 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +   N  G         +  +  + +  A + ++VR  LIA+PR Q E+A ALGLT
Sbjct: 80  GLTRVAGINLDG-------ITASVLVFTLWGGAEMGDLVRGALIAIPRHQYESAYALGLT 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE- 365
            R+  R V+LPQ +R + PP  +    ++K +SL V +G  +++ VG  II+        
Sbjct: 133 PRQTMRRVILPQTLRRLAPPAVNLITRMIKTTSLVVLIGVVEVLKVGQQIIDSNRFTYPT 192

Query: 366 ----IILIWMFIYLSLSIMIALFMNRLNA 390
               I  +   +Y  +   I+L    +  
Sbjct: 193 ASLWIYGLIFVLYFLICWPISLLSRHMEK 221



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + I+G  VG G  S  + + W+ ++Y+E  R +P LV++F  
Sbjct: 18  ILEGLGVTVGISALSVVLSLILGVFVGLGMRSRWRPLRWLMQLYLEFVRIMPQLVLLFVA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  V  I    I     +F   
Sbjct: 78  YFGLTRVAGINLDGITASVLVFTLW 102


>gi|197284574|ref|YP_002150446.1| arginine transporter permease subunit ArtM [Proteus mirabilis
           HI4320]
 gi|194682061|emb|CAR41584.1| arginine ABC transporter, permease protein [Proteus mirabilis
           HI4320]
          Length = 222

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 95/227 (41%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +      + T+  +   + ++   LS+  T +      K     P++ +   L  G
Sbjct: 1   MWDYIVDILPGLPTSLSLTFVALLVAFTLSVLMTFI---LALKVPVISPIVKVYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   L Y      P L +F  +     +P F    + L+  +AA+   +    + A
Sbjct: 58  TPLLVQFFLIYYGPGQFPSLKEFPLLWELLSTPWF-CAMVTLALNSAAYSTLLFHGAVRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++  +    V+LP A +  +   +++ + + K++SLA  +   +L  
Sbjct: 117 IPAGQWQSCQALGMSPLQT-ANVILPYAFKRALSSYSNEVVLIFKSTSLASTITLLELTG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  Q    + + +    IYL+++ ++ L M  +  K    E +
Sbjct: 176 YSRQVFGQNYDVM-VFVAAGIIYLAINGILTLLMRLIEKKALAFEHR 221


>gi|148555537|ref|YP_001263119.1| polar amino acid ABC transporter inner membrane subunit
           [Sphingomonas wittichii RW1]
 gi|148500727|gb|ABQ68981.1| polar amino acid ABC transporter, inner membrane subunit
           [Sphingomonas wittichii RW1]
          Length = 362

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 69/280 (24%), Positives = 105/280 (37%), Gaps = 28/280 (10%)

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP-------- 179
           +  +Y E  R  P LVV+     ++ S+         L F  F     L           
Sbjct: 85  LFGIYPEAERWRPILVVLILGAATLWSLPRAHWTRATLAFWGFAIVASLLLMAGGRLGLS 144

Query: 180 ------TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +     + +FS  LG    +    L+R       +      I       L 
Sbjct: 145 PVPTSAWGGLPITMLLTIFSLALGFPFGIVL-ALARRSDMPVYRWTATALIEVMRAMPLV 203

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A           +     +     +       +A    ++A+IAE+VR GL  VP
Sbjct: 204 TLLFVA----------SVMAPLLLPAGVTADNLTRALVAFVLSSSAYIAEVVRGGLQGVP 253

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ E+A ALGL        ++LPQA+R  + PLTS  + ++KNSSL + VG  DL+S G
Sbjct: 254 PGQRESARALGLGRSTVLLSIILPQAIRKALAPLTSTVVVIIKNSSLVLVVGLFDLLSAG 313

Query: 354 GTIINQTGQAI---EIILIWMFIYLSLSIMIALFMNRLNA 390
              +N         E  L+   IY  +    A +   L  
Sbjct: 314 RVSLNDPAWPTPYAETYLVIALIYFVICYGFARYALHLER 353



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 26/74 (35%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L    +      G ++   R S   +  W     +EV R +P + ++F     
Sbjct: 153 GLPITMLLTIFSLALGFPFGIVLALARRSDMPVYRWTATALIEVMRAMPLVTLLFVASVM 212

Query: 152 VLSVLPIPDHSIVL 165
              +LP    +  L
Sbjct: 213 APLLLPAGVTADNL 226


>gi|187919546|ref|YP_001888577.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187717984|gb|ACD19207.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 220

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 14/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T    +     +GI++      L + F  +  + +  LYI  F   G P LV + L Y  
Sbjct: 22  TTLGTWAAGVAIGILIGFLIAVL-QLFCGRWVRGVLRLYIELF--RGTPFLVQLFLLYYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G T+ P   +  + L  Y +A+ AE  RSG  +VP G +EAA  LG
Sbjct: 79  GPSF----------GLTLEP-MTAGVLGLGLYGSAYFAEAFRSGFQSVPPGHLEAASCLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +
Sbjct: 128 LTRWQAVLRIQVPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFV 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E +L+    YL+L  + +        +IA 
Sbjct: 188 ETLLVLCVCYLALVELTSRAGMWAETRIAR 217



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 35/81 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T     +G+    +IG L+   +L   + V  + R+Y+E+FR  P LV +F L
Sbjct: 16  IAAGLATTLGTWAAGVAIGILIGFLIAVLQLFCGRWVRGVLRLYIELFRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           Y    S     +       G+
Sbjct: 76  YYGGPSFGLTLEPMTAGVLGL 96


>gi|330961754|gb|EGH62014.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 277

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 1/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-FLIFGLPTLVLIALKYQLHFDKPVL 251
            F+ G  L+LF +  S       G    L  +S+  + FG+ +      +      + +L
Sbjct: 69  GFLQGAALTLFVSVCSIVVSVVLGFVTALARLSSSAVAFGIASFYASFFRGTPLLIQILL 128

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                     V    M+  IALS    A+++EI R+G+I V  GQ EAA+AL L   +  
Sbjct: 129 IYLGLPQVGIVPGAIMAGVIALSLNYGAYLSEIFRAGIIGVAAGQREAALALALRPAQIF 188

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
             V LPQAMR+IIPP T+Q++++LK+SSL   +G  +++ +  +    + + IE++    
Sbjct: 189 WRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYIEMLTTAA 248

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  +SI + L  +RL     
Sbjct: 249 VLYWIMSIGLELLQSRLEKHYG 270


>gi|307320838|ref|ZP_07600248.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306893548|gb|EFN24324.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 220

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +  +  +   + + G V+ L  T           +    LY++  +I   
Sbjct: 11  WRSFDLLLEGLALSLGLAFVAILAGCVIGLI-TAFGLVSRRALLRKPAGLYVT--VIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y           F          +  S    L+ Y+ A++AE+ R GLIA+
Sbjct: 68  PILVLVLFSY-----------FALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EA +A+GLT  +    +++P  +RS++P L S  ++L K++SLA A+   +L   
Sbjct: 117 PPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFE 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  +T + IE  ++   +Y++   ++A  M     ++A+  
Sbjct: 177 ARKINVETFRVIETWIVASCLYVATCSLLAALMRAAERRLAVPR 220



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           AF  ++   +IG +   G +S   L+     +YV V RN P LV++ F Y ++  +    
Sbjct: 28  AFVAILAGCVIGLITAFGLVSRRALLRKPAGLYVTVIRNTPILVLVLFSYFALPELGVRL 87

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                    + + +             A 
Sbjct: 88  GKIESFVATLAIYSGAYLAEVFRGGLIAI 116


>gi|289804697|ref|ZP_06535326.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 190

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 10/199 (5%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             V G +L++           +     P+ + +   +    ++ L+ +    +   P   
Sbjct: 2   GIVWGTILAVM----------RLSSFAPIAWFAKAYVNVFRSIPLVMVLLWFYLIVPGFL 51

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+ALG+TH ++ +
Sbjct: 52  QNVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMK 111

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           L++LPQA R+++P L +Q + L +++SL   +  AD      TI  + G  +E+IL    
Sbjct: 112 LIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGA 171

Query: 373 IYLSLSIMIALFMNRLNAK 391
           +Y  +S+  +L ++ L  +
Sbjct: 172 VYFVISLSASLLVSYLKKR 190



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
              + GT++   RLS+   +AW  + YV VFR+IP ++V+ + Y  V 
Sbjct: 1   MGIVWGTILAVMRLSSFAPIAWFAKAYVNVFRSIPLVMVLLWFYLIVP 48


>gi|212704551|ref|ZP_03312679.1| hypothetical protein DESPIG_02611 [Desulfovibrio piger ATCC 29098]
 gi|212671950|gb|EEB32433.1| hypothetical protein DESPIG_02611 [Desulfovibrio piger ATCC 29098]
          Length = 275

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 102/219 (46%), Gaps = 14/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
             F              +  +G+VL +    L + +     + L  LY+  F   G+P L
Sbjct: 49  FPFIMGGTLVTVGSVALALGMGLVLGVPMAVL-QVYGNALARRLVGLYVWFF--RGVPIL 105

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ L   L           F+    +   F+   + + C + A+ ++I R  + ++P+G
Sbjct: 106 VLLFLSQGL-----------FLSMGWILEPFLLSCLVMGCISTAYQSQIFRGAIESLPQG 154

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q++AA ALG+    A   ++LPQA+R  IP   +++  LLK+S++   +G  ++++    
Sbjct: 155 QLKAARALGMRDMTAITCIILPQALRLSIPGWANEFSILLKDSAVCYLLGTMEIMARVNA 214

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +T + +    +   IY  L++++   + RL  K+ +
Sbjct: 215 VAQRTHEHLAFFALAGVIYFVLTLIVLKLLRRLENKVQI 253


>gi|190151021|ref|YP_001969546.1| aino acid ABC transporter permease [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264380|ref|ZP_07545967.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|189916152|gb|ACE62404.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
 gi|306870267|gb|EFN02024.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 219

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R +    +T+  +    + S + G+++++        +  K    L   
Sbjct: 1   MNWSYVVNAIPRFIDAAIITLQLSFWGILLSLIFGLLIAVVT-----AYQVKPFYGLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 56  YIE--LSRNTPLLIQLFFLYY-----------GLPKIGIKWDGFTCGIIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           AV  A+L+ V   II    +  E + +    YL + + I+L       K
Sbjct: 163 AVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFENK 211



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F G++ + I G L+        K    + R Y+E+ RN P L+ +FFL
Sbjct: 13  FIDAAIITLQLSFWGILLSLIFGLLIAVVTAYQVKPFYGLARGYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YYGLPKIGIK 82


>gi|172064621|ref|YP_001812271.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171998106|gb|ACB69022.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 258

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 92/242 (38%), Gaps = 3/242 (1%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
                 P      +    M    + L       +    + V S  L + +   A  +++ 
Sbjct: 9   MQAQAEPERIARALERSVMSELQQYLPALLRGAEVTIVLAVLSVALAVCIG-MAGAMAKL 67

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +   +    Y  T LI G+P  V + L +             F   +     F++  
Sbjct: 68  SGSRVLVSAATAY--TTLIRGVPEFVTMLLVFYGGQILLNRLAAVFGLHAPGVDAFVTAV 125

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +     A+  E  R  ++ VPRGQMEAA A G +   A R +L PQ  +  +P + + 
Sbjct: 126 VTIGFIFGAYYTETFRGAMLGVPRGQMEAARAYGFSEWLAFRRILFPQMAQLALPAVVNN 185

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L LLK +++A  +G  D++ +       T   +   L    +YL ++      + R   
Sbjct: 186 WLVLLKTTAIASLIGLHDVMFISDHAGRTTQAPMTFYLAACAVYLLVTSGSTACLARARV 245

Query: 391 KI 392
           ++
Sbjct: 246 RM 247



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           +    Y  A+L G   T  LA   +  A  IG      +LS ++++      Y  + R +
Sbjct: 28  SELQQYLPALLRGAEVTIVLAVLSVALAVCIGMAGAMAKLSGSRVLVSAATAYTTLIRGV 87

Query: 140 PPLVVIFFLYKSV 152
           P  V +  ++   
Sbjct: 88  PEFVTMLLVFYGG 100


>gi|119026276|ref|YP_910121.1| hypothetical protein BAD_1258 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118765860|dbj|BAF40039.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 236

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 13/233 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F +      L+    T+       +F+ ++ ++        +  F +       L+  
Sbjct: 5   YDFMVTDFPTVLAGLPKTLILTFWSTLFALLIALIFGCVILSNAPAFKQ-------LVVA 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSCYTAAF 280
               I G+P  V +   Y  +    V      IG    +P     F +  +A++C   A+
Sbjct: 58  LNTFIKGVPLAVQLLFCY--YAVPFVAKWLGSIGIYDFNPRHISYFPAAVVAIACNFGAY 115

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I ++V S + AV RGQ+E+A ++G+T  +    V++PQA+   +P +T+ ++ LLK +SL
Sbjct: 116 ITDVVVSSVKAVDRGQIESAQSVGMTGLQTALHVIVPQAVVISLPSMTNYFIWLLKGTSL 175

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +++           Q +E  +    IY  +   I     RL  ++ 
Sbjct: 176 ASLINVTEMLITAQISAADGYQYLEAYIDAALIYWVVCAAIEFGSERLFKRVG 228


>gi|319407361|emb|CBI81008.1| ABC transporter, permease protein [Bartonella sp. 1-1C]
          Length = 234

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 2/227 (0%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L    F N         +      + + S +LG+ L L    +    + +  KA+  L+
Sbjct: 4   SLSLLSFSNGGWGMVILKSAGITLSLALCSIILGLPLGLMNATII-QSNIRILKAIATLF 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            S F       L L  + Y L      +  F  I        F++  +A S   AAF  E
Sbjct: 63  SSVFRGL-PEILTLFFVYYGLQNCIQAIFDFLNIDIIFSINAFIAGVLAFSMVFAAFSCE 121

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +  +      + Q EAA  LGL+       ++ PQ + + +P L++ +L LLK++SL   
Sbjct: 122 VWLAAFKMFDKSQYEAAQVLGLSRSTTFFRIVFPQLLHNALPGLSNNWLTLLKDTSLVST 181

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +   DL+         T + I   L+   +YL  S + +  +  L+ 
Sbjct: 182 ISLLDLMRQTNLAATATNEPILFYLVACLLYLLFSAVSSAILRYLDK 228


>gi|119718791|ref|YP_925756.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardioides sp. JS614]
 gi|119539452|gb|ABL84069.1| amino acid ABC transporter membrane protein, PAAT family
           [Nocardioides sp. JS614]
          Length = 241

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 100/217 (46%), Gaps = 13/217 (5%)

Query: 183 MDTNAKIFVFS--FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              N K+F+ +   +L +  ++   R +        + L ++Y   F       +V +  
Sbjct: 33  FWLNVKMFLAAEPLILLLGGAVAIVRSTVSPLLTPIRLLAVVYTDFFRGVPTILVVFLF- 91

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
                F  P LG         V         AL     A++AE++R+G+ +V   Q+ +A
Sbjct: 92  ----AFGIPALGLQGVPNDLAVL-----GTAALVLSYGAYVAEVIRAGIDSVHPSQVASA 142

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALGL+  +A R V+LPQ +R ++PPL + +++L K+++L  AVG  + +       N  
Sbjct: 143 EALGLSRAQAMRFVVLPQGVRRVVPPLINDFVSLQKDTALVGAVGVFESLFAAQDYGNFN 202

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                  L+    +++L+I IA F + +  ++  +E+
Sbjct: 203 FNYTP-YLVTAAFFVALTIPIARFTDWMGRRMMERER 238


>gi|239833264|ref|ZP_04681592.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821327|gb|EEQ92896.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 225

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 96/234 (41%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +           M   A++ + + V G ++   A  ++R       + L   Y+
Sbjct: 1   MTFDFSVVLLRWHMLVDGMALTAQLALITTVTGFIIGT-ACAIARRSGGPVLRRLATAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            +  I   P LV I + Y           F                +AL+    A+ AEI
Sbjct: 60  ES--IRNTPFLVQIFVIY-----------FGLSSLGYSFGAIFVAVVALTVNVGAYTAEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G  ++  GQ EA   LGL+  +    V L  AM  + P LTSQ++ L+  SS+   +
Sbjct: 107 MRAGFDSIQEGQWEAGECLGLSSTQLYWHVGLRPAMERVYPALTSQFILLMLASSVTSQI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L + G  I ++T +  E  L+   IYL LS+ +      L   +  + ++
Sbjct: 167 SAEELTAAGNFIQSETYRPFETYLVIAVIYLFLSLGMRALFWGLGMALFPRRRR 220



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 35/87 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  LA    +   IIGT     R S   ++  +   YVE  RN P LV I
Sbjct: 12  WHMLVDGMALTAQLALITTVTGFIIGTACAIARRSGGPVLRRLATAYVESIRNTPFLVQI 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           F +Y  + S+        V    + +N
Sbjct: 72  FVIYFGLSSLGYSFGAIFVAVVALTVN 98


>gi|110803729|ref|YP_698645.1| glutamine ABC transporter permease [Clostridium perfringens SM101]
 gi|110684230|gb|ABG87600.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens SM101]
          Length = 213

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 15/207 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F+ + +L I L +    L R  + K    +  LY+   ++ G P L+ +   +   F
Sbjct: 19  LGVFILTLLLSIPLGMIVAIL-RLSNIKIVNFISSLYV--LVMRGTPLLLQLIFIF---F 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P++              F +  IA +   AA+  EI RSG+  + +GQ EA+  LGL+
Sbjct: 73  GLPII--------GISIDRFPAAIIAFTLNYAAYFGEIFRSGIKDIDKGQFEASKILGLS 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                + ++LPQ+ +  +P +T++ + L+K++SL   VG  +L+  G    N+    + +
Sbjct: 125 KWFTFKKIILPQSFKKTLPSITNEVITLVKDTSLVYVVGIGELLRAGKIASNRDASLLPL 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            LI +   L L  ++    NRL  K +
Sbjct: 185 FLIGIIY-LLLIGILTKIFNRLEKKYS 210



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G  NT  +    ++ +  +G +V   RLS  K+V +I  +YV V R  P L+ + F+
Sbjct: 11  IIEGLKNTLGVFILTLLLSIPLGMIVAILRLSNIKIVNFISSLYVLVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  +  +    D          LN 
Sbjct: 71  FFGLPIIGISIDRFPAAIIAFTLNY 95


>gi|89053120|ref|YP_508571.1| amino acid ABC transporter permease [Jannaschia sp. CCS1]
 gi|88862669|gb|ABD53546.1| L-aspartate ABC transporter membrane protein / L-glutamate ABC
           transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-asparagine ABC
           transporter membrane protein [Jannaschia sp. CCS1]
          Length = 445

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 7/214 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
              F+ +FV+G    + +  L        G+   L  I+ F +  +  +  + L   L  
Sbjct: 236 FGGFLLAFVIGASGIILSMPLGVML--ALGRQSDLFIINKFSVIFIEVIRGVPLIVWLFT 293

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            + +LG F   G  T     + + I ++ ++AA+IAE++R GL A+PRGQ E A +LGL 
Sbjct: 294 AQLLLGYFLPPG--TNFDLMVRVIIMVTLFSAAYIAEVIRGGLAALPRGQYEGADSLGLN 351

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQA 363
           + ++ +L++LPQA++  IP + S ++ L K+++L V +G  D +     I   T   G  
Sbjct: 352 YWQSMQLIVLPQALKISIPGIVSSFIGLFKDTTLVVFIGLFDPIGFSNAIRADTDWNGIY 411

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E+ +     +      ++ +   L  K+A   +
Sbjct: 412 WELFIFIGLCFFICCFGMSRYSQWLERKLATDHR 445



 Score = 36.1 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 25/175 (14%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFL--SERAGFEID 73
              LYD     + +       L    LW  +     +  +   LG   +     A   + 
Sbjct: 137 APVLYDTLPRKLLLLTAAMPFLCAWLLWGGSIWTPLLVAAGFGLGYAVIKFGSVALGAMT 196

Query: 74  QGIVPYTSDSSYATAIL-----------------------VGFVNTFWLAFSGMIPATII 110
             I+       Y   +L                        GF+  F +  SG+I +  +
Sbjct: 197 STILAIVVPLLYWLFLLGPLVSVMDSILPIGIQAVQSREFGGFLLAFVIGASGIILSMPL 256

Query: 111 GTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           G ++  GR S   ++     +++EV R +P +V +F     +   LP   +  ++
Sbjct: 257 GVMLALGRQSDLFIINKFSVIFIEVIRGVPLIVWLFTAQLLLGYFLPPGTNFDLM 311


>gi|319950337|ref|ZP_08024256.1| polar amino acid ABC transporter, inner membrane subunit [Dietzia
           cinnamea P4]
 gi|319436029|gb|EFV91230.1| polar amino acid ABC transporter, inner membrane subunit [Dietzia
           cinnamea P4]
          Length = 276

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 108/258 (41%), Gaps = 12/258 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV--FSFVLGIVL 200
           +++  +   +              +  F+ +  +    L             S VL +V 
Sbjct: 28  ILVIGIAYVIYLQFQKAGQLKAFMWEPFVTDPEVWTSYLIPGLKGTFTAAGISIVLAVVF 87

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L    + R       +    + +  F    +P L+++   Y  +F    L         
Sbjct: 88  GLLFG-MGRLSPFAPLRWFCSVIVEFF--RAVPVLLMMVFAYFGYFATSDLV-------P 137

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  ++  AL+ Y  A IAE+VRSG+  +P+GQ EA +++GLT  +  R + LPQA+
Sbjct: 138 NQHAPLAAVVTALTLYNGAVIAELVRSGVHGLPKGQSEAGLSVGLTSGQVLRSIQLPQAL 197

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            +++P L  Q + +LK+S+L   + + +L++   T+ +     +   ++   +++ ++  
Sbjct: 198 TAMLPALVGQLVVVLKDSALGYGITYLELLNWSKTLGSAYANTVPAYIVAGILFIVINYS 257

Query: 381 IALFMNRLNAKIALKEKK 398
           +  F   L  ++  +  +
Sbjct: 258 LTKFAVYLEGRMKKRRAR 275



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 16/134 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R+ +  + ++ A+L+  I            +         F+ E             T 
Sbjct: 15  ARLRHRVLTVVGAILVIGIAYVIYLQFQKAGQLK------AFMWEPF----------VTD 58

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              + + ++ G   TF  A   ++ A + G L G GRLS    + W C V VE FR +P 
Sbjct: 59  PEVWTSYLIPGLKGTFTAAGISIVLAVVFGLLFGMGRLSPFAPLRWFCSVIVEFFRAVPV 118

Query: 142 LVVIFFLYKSVLSV 155
           L+++ F Y    + 
Sbjct: 119 LLMMVFAYFGYFAT 132


>gi|224823569|ref|ZP_03696678.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224604024|gb|EEG10198.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 229

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 10/235 (4%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L F        L    +T+   A   +  F+L + L++     +R    +T  AL   Y
Sbjct: 5   YLGFAFEHGQELLDGLWITLKLLALSSLGGFLLALPLAV-----ARVSPNRTVAALARGY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            + F   G P LV I + Y        +   N      ++  F    +AL+   AA++AE
Sbjct: 60  SALF--RGTPLLVQIFILYYGFSQFEAVR--NSPAWFVLADAFNCALLALTLNIAAYMAE 115

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R+G+I VP G+ EAA+A G+    +   ++LP+A+    P L ++ ++ LK S+LA  
Sbjct: 116 DLRAGIIGVPHGEKEAALAYGMGRCGSYLHIILPRAIGIAAPALGNEVVSQLKASALASV 175

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   ++  V      Q+    + +++   +Y++++++++L       +I   + +
Sbjct: 176 ITVLEVTGVARRFSAQSYST-DPLIVAGLLYVAVTLLLSLLARLAERRINCHQPR 229



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 38/111 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L     +   ++   +   R+S N+ VA + R Y  +FR  P LV 
Sbjct: 12  HGQELLDGLWITLKLLALSSLGGFLLALPLAVARVSPNRTVAALARGYSALFRGTPLLVQ 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           IF LY        + +           N   L+         A+      +
Sbjct: 72  IFILYYGFSQFEAVRNSPAWFVLADAFNCALLALTLNIAAYMAEDLRAGII 122


>gi|126731794|ref|ZP_01747598.1| probable amino acid ABC transporter, permease protein [Sagittula
           stellata E-37]
 gi|126707621|gb|EBA06683.1| probable amino acid ABC transporter, permease protein [Sagittula
           stellata E-37]
          Length = 238

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 4/220 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++   S  LG +L++    L+R    +  + +   YI  F   G P 
Sbjct: 8   NLPRFLGGAWLTIQLAAISCGLGFLLAV-PIALARLSRNEVLRGVATSYIFFF--RGTPL 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L  + L Y              +      P F    ++L+  +AA+ +EI+R  + A+P+
Sbjct: 65  LAQLFLIYYGSGQFRPALDAVGLWTFFRDPWF-CAILSLTLNSAAYASEILRGAIQAIPK 123

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G++EAA ALGLT     RL++LP+A+R   P  +++ +  ++ +SL   +   ++  V  
Sbjct: 124 GEIEAAEALGLTRLLRLRLIVLPRALRIGWPAYSNEVVYQIQATSLVSIITVLEITGVAR 183

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           T+ ++     E   +   +YL L         R+  ++  
Sbjct: 184 TVGSRDFTFFEAFGLAAVLYLILVYGFLYVSRRIEMRLNR 223



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 37/110 (33%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  LA        ++   +   RLS N+++  +   Y+  FR  P L  +F +
Sbjct: 12  FLGGAWLTIQLAAISCGLGFLLAVPIALARLSRNEVLRGVATSYIFFFRGTPLLAQLFLI 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           Y       P  D   +  F        +   TL     A   +   +  I
Sbjct: 72  YYGSGQFRPALDAVGLWTFFRDPWFCAILSLTLNSAAYASEILRGAIQAI 121


>gi|118590273|ref|ZP_01547676.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118437245|gb|EAV43883.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 275

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 94/258 (36%), Gaps = 5/258 (1%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R     +    L    +       + + +        +             +I   S ++
Sbjct: 19  RWTKTRIFGHVLMALWIVSGAWLLYYLAINIASPFVLKYWPEYLSGFFVTLQIVGLSLLI 78

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G +LSL     +R             Y+  F   G P L    L Y          +   
Sbjct: 79  GAILSLPIAA-ARASKWWLLSKPAYCYVYFF--RGTPLLAQTFLVYYGAGTFQPQLEAIG 135

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           + G      F  +  A S  T+A+ AEI+R  +  V RGQ E A ALG+  +     ++L
Sbjct: 136 LWGLFREAWF-CVIFAFSLNTSAYQAEILRGAIQNVSRGQWEGAAALGINKKITFFKIIL 194

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+   + P  ++ + +LK S++A  V   DL        +++    +  +    IYL 
Sbjct: 195 PQALIVALRPYGNEIILMLKGSAIAAIVTVFDLFGETRRAYSRSYD-FQAYIWAAVIYLF 253

Query: 377 LSIMIALFMNRLNAKIAL 394
           L  M+    +R+  ++  
Sbjct: 254 LVEMLRRLWDRIEIRLTR 271



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 28/74 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L GF  T  +    ++   I+   + A R S   L++     YV  FR  P L  
Sbjct: 57  YWPEYLSGFFVTLQIVGLSLLIGAILSLPIAAARASKWWLLSKPAYCYVYFFRGTPLLAQ 116

Query: 145 IFFLYKSVLSVLPI 158
            F +Y    +  P 
Sbjct: 117 TFLVYYGAGTFQPQ 130


>gi|26990306|ref|NP_745731.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148547398|ref|YP_001267500.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24985260|gb|AAN69195.1|AE016554_2 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|148511456|gb|ABQ78316.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|313498468|gb|ADR59834.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 236

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 4/180 (2%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + +   Y+  F   G P L  + L Y          Q   +        F +L +A +
Sbjct: 58  VLQRMAAGYVYFF--RGSPLLAQLFLLYYGLGSLKGFWQDVGLWWFFRDAWFCTL-LAFT 114

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             TAA+ AEI R  L+AV  GQ EAA AL L        V+LPQ++   I PL ++ + +
Sbjct: 115 LNTAAYQAEIFRGSLMAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILM 174

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +K S++A  V   DL+ V     +++    +I L    +YL +  ++   +  L A++  
Sbjct: 175 IKASAIASLVTIYDLMGVTKLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHLEARLGR 233


>gi|146279203|ref|YP_001169361.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145557444|gb|ABP72056.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 218

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 16/186 (8%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           RLSR F     +AL  +YI  F   G    V +   + ++F  P         G T+SP 
Sbjct: 40  RLSRFFAV---RALATVYIEFF--RGTSIFVQL---FWVYFVLP-------FAGITLSP- 83

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  + L     A+ AE+VR  +++VP+ Q+EA +AL LT  +  R V+LPQA+  ++P
Sbjct: 84  LAAGVLTLGLNVGAYGAEVVRGAVLSVPKDQLEATVALNLTRFQRMRHVILPQALPLMLP 143

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +  + LLK +++   +   D+      +  QTG  +   +  + +Y ++++ I   +
Sbjct: 144 TFGNNAIELLKATAVVSLISLPDMTFQAQVVRAQTGNTLLPFVTILVLYYAMAMAIGGGV 203

Query: 386 NRLNAK 391
             L  +
Sbjct: 204 RLLERR 209



 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 3/142 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T I  G + T  L   G   A +     G  RLS    V  +  VY+E FR     V 
Sbjct: 7   YLTLIAGGALMTAQLTLYGSALALVAAFAAGLARLSRFFAVRALATVYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F++Y  +            L  G+      +      +   A + V    L   ++L  
Sbjct: 67  LFWVYFVLPFAGIT---LSPLAAGVLTLGLNVGAYGAEVVRGAVLSVPKDQLEATVALNL 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
           TR  R  H    +ALPL+  + 
Sbjct: 124 TRFQRMRHVILPQALPLMLPTF 145


>gi|283852209|ref|ZP_06369482.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
 gi|283572435|gb|EFC20422.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. FW1012B]
          Length = 237

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 5/223 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   L +    +   A +   +  LG+VL +    +S  +  +  +     Y+  F   G
Sbjct: 11  SWEALPYILGGLWWTAGLIFGAMALGLVLGIPL-AISHVYGGRLARRAVAGYVWLF--RG 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV + L Y        L +   +    +S  F S  + L   +AA+ ++I R  +  
Sbjct: 68  VPILVQLYLFYFGIMAY--LSEIPALSFLPLSSGFFSAVVVLGLTSAAYQSQIFRGAIRG 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ+ AA ALG++   A R ++LPQA+R  IP  +++Y  LLK+S+LA  +G  ++++
Sbjct: 126 LPPGQLRAARALGMSDATAIRAIILPQALRLSIPAWSNEYSILLKDSALAFTIGVLEVMA 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              ++   T Q + + ++   ++  L+      + RL AK+ +
Sbjct: 186 RTRSVAATTHQPLPLSILAGALFFFLTWAGIKALKRLEAKVRI 228



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            +       IL G   T  L F  M    ++G  +    +   +L       YV +FR +
Sbjct: 9   QASWEALPYILGGLWWTAGLIFGAMALGLVLGIPLAISHVYGGRLARRAVAGYVWLFRGV 68

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           P LV ++  Y  +++ L        LP      +  +     +    ++IF
Sbjct: 69  PILVQLYLFYFGIMAYLSEIPALSFLPLSSGFFSAVVVLGLTSAAYQSQIF 119


>gi|323529859|ref|YP_004232011.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386861|gb|ADX58951.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 220

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T A       ++G V+++      + F  +  + L   YI  F   G P LV + L Y  
Sbjct: 26  TWAAGVAIGMLIGFVIAVL-----QLFCGRWVRGLLRFYIELF--RGTPFLVQLFLLYYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G T+ P   +  + L  Y +A+ AE  RSGL +VP G +EAA  LG
Sbjct: 79  GPSV----------GLTLEP-MTAGVLGLGMYGSAYFAEAFRSGLQSVPPGHLEAASCLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +A   + +PQ +  I+P LT+  + L K +++   V   +L  V   I + T   +
Sbjct: 128 LTRTQAVLRIQMPQMLVLIVPALTNLIIVLSKETAVLSIVTVPELTFVLTGIGSATFAFV 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E +L+    YL+L  + +       A+IA 
Sbjct: 188 ETLLMLCVCYLALVELTSRAGMWAEARIAR 217



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 37/99 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T     +G+    +IG ++   +L   + V  + R Y+E+FR  P LV +F L
Sbjct: 16  IAAGLATTLGTWAAGVAIGMLIGFVIAVLQLFCGRWVRGLLRFYIELFRGTPFLVQLFLL 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y    SV    +       G+ +               +
Sbjct: 76  YYGGPSVGLTLEPMTAGVLGLGMYGSAYFAEAFRSGLQS 114


>gi|167587239|ref|ZP_02379627.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 245

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 9/236 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +F NN          D        S VL I  +  +  L          A     +
Sbjct: 1   MEFSLFANNLPYLLVGAFPDGPLGGAALSLVLAIASACASAVLGVALGVAMALARGWARV 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                 G    + ++ L +  +F  P+L         T  P   ++  AL+    A++A 
Sbjct: 61  LLLAFIGFFRAIPVLMLIFWTYFLMPML-------LHTDVPGLATVVCALALIGGAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  
Sbjct: 114 AVHAGIVAAGAGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVSLVKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG  +L  V   + N+       I L    IYL L   +      L +     E+ 
Sbjct: 174 VGVPELSFVATQVNNRLMVYPAPIFLFVAAIYLVLCTSLDGAARWLLSWRPRAERH 229


>gi|152970317|ref|YP_001335426.1| glutamine ABC transporter permease component [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206577693|ref|YP_002238436.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|238894801|ref|YP_002919535.1| glutamine ABC transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288935410|ref|YP_003439469.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290509460|ref|ZP_06548831.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
 gi|330010550|ref|ZP_08306783.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150955166|gb|ABR77196.1| glutamine ABC transporter permease component [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|206566751|gb|ACI08527.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|238547117|dbj|BAH63468.1| glutamine ABC transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288890119|gb|ADC58437.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289778854|gb|EFD86851.1| polar amino acid transport system permease [Klebsiella sp. 1_1_55]
 gi|328534487|gb|EGF61075.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 221

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + + G+ + +    +      ++G+   L  +    +  +
Sbjct: 11  WPHWPELLAGLWVTVQLTVLATIGGLAIGILGAAI------RSGRPGMLSRVWGGYVEII 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                +   + + F  P LG     G         +  +A+     A+  EIVR+G+   
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKMTAGE--------AALLAMVVNLGAYSTEIVRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGL+  +    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLSRTQTFVRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I ++T  + E+ L+   IYL+LSI +   +     K
Sbjct: 177 ANLIQSRTFLSFEVYLVTTGIYLALSIAMRQLLMAAGRK 215



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 38/96 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    +   +L G   T  L     I    IG L  A R     +++ +   YVE+ 
Sbjct: 5   LHFSELWPHWPELLAGLWVTVQLTVLATIGGLAIGILGAAIRSGRPGMLSRVWGGYVEII 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKMTAGEAALLAMVVN 100


>gi|302537787|ref|ZP_07290129.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
 gi|302446682|gb|EFL18498.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
          Length = 292

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 30/261 (11%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L ++ ++   +                  +    L     T+   A   V S VLG VL
Sbjct: 38  ILGLLAWILYLLFDTDQFTAAKWSPFEYEGIQELLLKGLGNTLKAFAYASVLSLVLGAVL 97

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +       R    +  +    L +  F                     PVL    FI  +
Sbjct: 98  AT-----GRLSVHRPVRWAATLCVEFFR------------------AMPVLVMIFFIFVA 134

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +L   L+ Y  + +AE+ R+G+ AV +GQ EAA ALG+   +    VL PQA+
Sbjct: 135 LKVQPLPALVAGLTLYNGSVLAEVFRTGVNAVEKGQREAAYALGMRKTQVMTFVLAPQAV 194

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSL 377
           R+++P + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ +
Sbjct: 195 RAMLPTIISQLVVALKDTSLGFLITYEEFLHAGKLIASNLDYDLPFIPVVMIISPIYIGM 254

Query: 378 SIMIALFMNRLNAKIALKEKK 398
            ++++ F       +A +E++
Sbjct: 255 CMLLSWFATW----VARRERR 271



 Score = 53.8 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 20/132 (15%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEID-QGIVPYT 80
            R  +    I    ++  +  W +                  L +   F         Y 
Sbjct: 23  ARRRHFLYGIASTAVILGLLAWILY----------------LLFDTDQFTAAKWSPFEYE 66

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
                   +L G  NT        + + ++G ++  GRLS ++ V W   + VE FR +P
Sbjct: 67  G---IQELLLKGLGNTLKAFAYASVLSLVLGAVLATGRLSVHRPVRWAATLCVEFFRAMP 123

Query: 141 PLVVIFFLYKSV 152
            LV+IFF++ ++
Sbjct: 124 VLVMIFFIFVAL 135


>gi|114770264|ref|ZP_01447802.1| putative glutamine ABC transporter permease protein [alpha
           proteobacterium HTCC2255]
 gi|114549101|gb|EAU51984.1| putative glutamine ABC transporter permease protein [alpha
           proteobacterium HTCC2255]
          Length = 277

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    L +   A       VLG++++L           K     PL             +
Sbjct: 69  LDAFKLNIMIFAWSAPAIAVLGLMIALARDA-------KAPALFPLRIFGAAFTDIFRGV 121

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I   Y + F  P LG          +  F+   +AL    +A++AEI R+G+ +V   
Sbjct: 122 PVILTVYLIGFGIPGLGL-----PRPWNSPFIWGSLALILTYSAYVAEIFRAGIDSVHPS 176

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA++LGL+ R+  R V+LPQA+R+++P   +  + L K+ SL   +G  ++    G 
Sbjct: 177 QRSAALSLGLSERQVMRDVILPQAVRNVVPSQMNMLIALQKDVSLLSFIGPVEIFRQAG- 235

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +           +    I+L ++I    + + L A+  ++E++
Sbjct: 236 VYKSLFANFTPYVGAAIIFLIVTIPATRYADYLMAR-QMRERR 277


>gi|86360357|ref|YP_472245.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284459|gb|ABC93518.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 234

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 13/218 (5%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   +F  S   G +L+L    + R    +        YI  F+  G P L+ + L + 
Sbjct: 18  PTTLILFSLSIFFGGLLALVIVTM-RVSGNRYLSGFAKGYI--FVFRGSPLLIQMFLVFY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++EA
Sbjct: 75  ------GLGQFGVIRYSFLWPFLREPMVCAILSLALCTAGYTAEIFRGGIRAVSPKEIEA 128

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ++G++     R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+Q
Sbjct: 129 ARSIGMSGFLLVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLISQ 188

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           T + +E+ L    IYL L+ +I   M  L   ++   +
Sbjct: 189 TYRTMEVFLCAAIIYLVLNFIILQGMALLEYSLSRHRR 226


>gi|302531068|ref|ZP_07283410.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
 gi|302439963|gb|EFL11779.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
          Length = 246

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 107/242 (44%), Gaps = 16/242 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
                     ++           +     + V + ++G +L +    +     ++  +  
Sbjct: 3   QFFNTFLNWQYIWEVFPDLLKTGLLNTLILSVAAAIIGTLLGMVLAVMG-LSTKRWLRWP 61

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +Y   F       L ++ +   +              G   +  +     ALS   AA
Sbjct: 62  ARVYTDIFRGLPA-ILTILVIGQGVGL---------LARGLVGNNPYPLGIAALSLIAAA 111

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +I EI R+G+ +V +GQ+EA+ ALG+++ KA  LV++PQ +R ++P L +Q++ L+K+S+
Sbjct: 112 YIGEIFRAGIQSVDKGQLEASRALGMSYTKAMLLVVIPQGVRRVLPALVNQFIALVKDST 171

Query: 340 LAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L   +GF     +L  +G  +   TG  +  ++    +YL +++ +   +N ++ ++   
Sbjct: 172 LVYFLGFLTSQRELFRIGQDLAANTGN-LSPLVAAGVVYLVITVPLTHLVNYIDKRLQTG 230

Query: 396 EK 397
            K
Sbjct: 231 RK 232



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 4/188 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +NT  L+ +  I  T++G ++    LS  + + W  RVY ++FR +P ++ I  + + 
Sbjct: 25  GLLNTLILSVAAAIIGTLLGMVLAVMGLSTKRWLRWPARVYTDIFRGLPAILTILVIGQG 84

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           V  +      +   P G+   +   +     +       V          + +S     L
Sbjct: 85  VGLLARGLVGNNPYPLGIAALSLIAAAYIGEIFRAGIQSVDKGQLEASRALGMSYTKAML 144

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                +   + LP L      +    TLV          +   +GQ        +SP   
Sbjct: 145 LVVIPQGVRRVLPALVNQFIALVKDSTLVYFLGFLTSQRELFRIGQDLAANTGNLSPLVA 204

Query: 268 SLYIALSC 275
           +  + L  
Sbjct: 205 AGVVYLVI 212


>gi|156933098|ref|YP_001437015.1| hypothetical protein ESA_00908 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531352|gb|ABU76178.1| hypothetical protein ESA_00908 [Cronobacter sakazakii ATCC BAA-894]
          Length = 228

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L    +T++      V S  +G+V +    +LSR+          +    T LI 
Sbjct: 5   FSQVILQGALVTLELALSAVVLSVAIGLVGA--GAKLSRNRPMAL-----IFEAYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +                        ++  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIALNAITDALGFSQFDIDPMIAGIITLGFIYGAYFTETFRGAYL 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+G +EAA A G T  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 AVPKGHIEAATAFGFTGSQTFRRILFPSMMRYALPGIGNNWQVILKATALVSLLGLEDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T Q     ++   IYL  + +    +  L  +  +  K+
Sbjct: 178 KATQLAGKSTWQPFYFAIVCGLIYLVFTTLSNGVLLLLERRYTVGVKR 225



 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 36/68 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL G + T  LA S ++ +  IG +    +LS N+ +A I   Y  + R +P LV+
Sbjct: 5   FSQVILQGALVTLELALSAVVLSVAIGLVGAGAKLSRNRPMALIFEAYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|146340848|ref|YP_001205896.1| putative amino acid ABC transport, permease [Bradyrhizobium sp.
           ORS278]
 gi|146193654|emb|CAL77671.1| putative amino acid ABC transport, permease protein [Bradyrhizobium
           sp. ORS278]
          Length = 506

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 18/230 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           L      +     + +   V+GIV S+    A  L R       +   + +I       L
Sbjct: 286 LPVVDTRLWGGMLVTLVVTVIGIVASMPIGIALALGRRSTIPLIRIFSIAFIELVRGVPL 345

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            T VL    Y L           F+ G+      +   I ++ ++ A++AE++R GL A+
Sbjct: 346 IT-VLFFATYMLPL---------FLPGNLRIDGLVRALIGVALFSGAYMAEVIRGGLQAI 395

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ EAA ALGL+  K T  ++LPQA+R +IP + + +++L K++SL   V   DL+  
Sbjct: 396 PRGQAEAASALGLSWWKTTSFIVLPQALRHVIPGIVNSFISLFKDTSLVSIVALFDLLGS 455

Query: 353 -----GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                   +      A         IY +    ++ +   +  ++    +
Sbjct: 456 LKASFADPVWATPTTAFTGFAFTGLIYFAFCFGMSRYSLLVERRLNAHRR 505



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +   G++ +  IG  +  GR S   L+      ++E+ R +P + V+FF 
Sbjct: 293 LWGGMLVTLVVTVIGIVASMPIGIALALGRRSTIPLIRIFSIAFIELVRGVPLITVLFFA 352

Query: 149 YKSVLSVLP 157
              +   LP
Sbjct: 353 TYMLPLFLP 361


>gi|57237521|ref|YP_178535.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni RM1221]
 gi|205355341|ref|ZP_03222112.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|57166325|gb|AAW35104.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni RM1221]
 gi|205346575|gb|EDZ33207.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|315057887|gb|ADT72216.1| Amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 233

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 10/216 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+  F  +  +++ LF   +S +F  K  + +  LYI        P L+ +   Y 
Sbjct: 18  WLTIKLSFFGIIFSLIIGLFCILMS-YFKIKILENICKLYIEF--SRNTPLLIQLFFLYY 74

Query: 244 LHF-------DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
                       P L         T+ P F    + LS    +++AE +R+G  A+ + Q
Sbjct: 75  ALPKFNIHLEQIPPLNLICLSVEETLRPSFACAIVGLSFLGGSYMAESLRAGFEAIRKQQ 134

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EA ++LG +     R V+LPQA+   +P +++  + L+K +S+   +   DLV++  ++
Sbjct: 135 FEAGLSLGFSKFGNLRYVILPQALAISMPSISANIIFLIKETSVVSIIALPDLVNLMKSL 194

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + T +  E++ +    YL + + ++  + +   ++
Sbjct: 195 NSLTYKTDELLFLLFMGYLCIILPLSFILLKFEKRL 230



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  AFLTAAWLTIKLSFFGIIFSLIIGLFCILMSYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLN 90


>gi|319782448|ref|YP_004141924.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317168336|gb|ADV11874.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 223

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L      + T   +   SFV  +++ +    ++        +A    YI 
Sbjct: 4   NFSFRTIVEYLPLFGQGLVTTVWLSALSFVGALIVGIVLCAMNLQRG-WLFRAPAKAYID 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              +   P L  +   Y L+F  P L          V PE +   +ALS  + A+IAEI+
Sbjct: 63  A--VRATPLLAQL---YFLYFGLPRL--------GFVLPELVVGILALSLNSGAYIAEII 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G++++PRGQ+EA++A G+T+ +  RLV+LPQA +  IPPL  Q + L+K+S+L   + 
Sbjct: 110 RAGILSIPRGQVEASVASGMTYVQRMRLVVLPQAFKVTIPPLLGQAIVLVKDSALLSLIS 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFI 373
            ++L   G  + +      E  L     
Sbjct: 170 VSELTRAGQLLASDRFMPAEGFLTIAAF 197



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 37/88 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y      G V T WL+    + A I+G ++ A  L    L     + Y++  R  P L  
Sbjct: 13  YLPLFGQGLVTTVWLSALSFVGALIVGIVLCAMNLQRGWLFRAPAKAYIDAVRATPLLAQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           ++FLY  +  +  +    +V    + LN
Sbjct: 73  LYFLYFGLPRLGFVLPELVVGILALSLN 100


>gi|182440605|ref|YP_001828324.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326781279|ref|ZP_08240544.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178469121|dbj|BAG23641.1| putative ABC transporter permease protein [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|326661612|gb|EGE46458.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 292

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 11/180 (6%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +AL   Y   F    L   +LI +     F  P L     + G T  P  +    AL   
Sbjct: 118 RALATAYTDFFRGLPLIICLLIVV-----FGVPALR----LEGVTTDPVLLGGG-ALVLT 167

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            +A++AE+ R+G+ +V   Q  AA +LGL+  +A R V+LPQA+R ++PPL +  ++L K
Sbjct: 168 YSAYVAEVFRAGIESVHPSQRAAARSLGLSGGQALRFVVLPQAVRRVVPPLLNDLVSLQK 227

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++ L    G  D V     I ++        ++   ++++L+I +    + + A++  + 
Sbjct: 228 DTGLVSIAGAVDAVYAAQIIASKDFNYTP-YVVAGLVFVALTIPMTRLTDWVTARMDRRR 286


>gi|149202380|ref|ZP_01879353.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144478|gb|EDM32509.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 275

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 9/234 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                + L      +     I V + VLG  L++    L++        A   L+ +  +
Sbjct: 46  WDWLPQYLPLALEGLWRTIWILVVTVVLGFALAVPLG-LAQAAGPWYLAAPARLFCT--I 102

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEI 284
           I G P L+ I L Y       +  Q+ +I GS + P     +    +AL+   A +  E+
Sbjct: 103 IRGTPLLLQIWLLYYG--LGSLFPQYPWIRGSELWPYLRQAWPYAVLALTLSYAGYEGEV 160

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G  +V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   +
Sbjct: 161 MRGGFASVQKGQLEAARAFGMPRFTIFRRIWLPQAIRNVLPTLGGETILQLKATPLVATI 220

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++ SV   +   T    E +L+   +Y+ ++ +IAL    +  ++  + + 
Sbjct: 221 TVIEIYSVSSRVRADTFIVYEPLLLLALVYMIIAGLIALMFRWIENRVPSRPRH 274



 Score = 43.0 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 33/94 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L G   T W+    ++    +   +G  + +    +A   R++  + R  P L+
Sbjct: 51  QYLPLALEGLWRTIWILVVTVVLGFALAVPLGLAQAAGPWYLAAPARLFCTIIRGTPLLL 110

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            I+ LY  + S+ P            +L      
Sbjct: 111 QIWLLYYGLGSLFPQYPWIRGSELWPYLRQAWPY 144


>gi|157369428|ref|YP_001477417.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157321192|gb|ABV40289.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 295

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 11/263 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L  +F L   + SV         +    F     LS    T+       +FS + G +L+
Sbjct: 22  LFSVFILAAILQSVATNERWEWGVFAEWFFAPAVLSGLGKTLLLTLLGTLFSIIFGTLLA 81

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ------FN 255
           L     +R        +L   YI  F    L  ++++   +   +D   LG       F 
Sbjct: 82  L-----ARLSRSYLLASLAWGYIWLFRSLPLILVLIVLYNFSYLYDSISLGIPFTSLVFA 136

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 +  +F    + L+   +A+ AEI+R G+I V  GQ EAA ALGL   + T  ++
Sbjct: 137 SYPTIDILSQFSVAVLGLTLVQSAYTAEIIRGGIIGVEYGQHEAAAALGLPGYRRTFRII 196

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+RSIIP   ++ ++L K +S+   +   +L      I N+T Q I ++++    YL
Sbjct: 197 LPQALRSIIPTGFNEIISLAKGTSIVYVLALPELFYTIQVIYNRTQQVIPLLMVATVWYL 256

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            ++  +++    +    A    +
Sbjct: 257 FITTALSVIQYYIERYFARGAVR 279


>gi|111221812|ref|YP_712606.1| amino acid ABC transporter membrane protein [Frankia alni ACN14a]
 gi|111149344|emb|CAJ61032.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Frankia alni ACN14a]
          Length = 248

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 6/171 (3%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            LP+  ++         L +I + Y + F  P L     + G    P  +    AL    
Sbjct: 54  FLPVRLLAAAYTDLFRGLPVILVLYLVGFGVPALR----LRGLPTDPLVLGGA-ALVLTY 108

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A++AE+ R+G+ +V   Q+ AA +LGLTH +  R V+LPQA+R + PPL +  ++L K+
Sbjct: 109 SAYVAEVFRAGIESVHPSQVAAARSLGLTHAQTMRRVVLPQAVRRVTPPLLNDAISLQKD 168

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           SSL   +G  D V       +         ++   ++L++++ +    + L
Sbjct: 169 SSLVSVLGVVDAVRAAQIATSANFNY-SPYVLAGLMFLAITVPLTRVTDHL 218


>gi|257869445|ref|ZP_05649098.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
 gi|257803609|gb|EEV32431.1| amino acid ABC transporter [Enterococcus gallinarum EG2]
          Length = 218

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 2/200 (1%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            + G+ +++  + LS  F    G    +L  +    F     V+I +   L     +   
Sbjct: 15  LIDGLRVTIEVSVLSIIFSFLIGGLAGVLRFTNIPFFSKILGVVIDVIRNLPLLLIIFFT 74

Query: 254 FNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +  +    +    F S  +AL+ + +A ++EI R+GL AVP+GQMEA ++ GL++ +  R
Sbjct: 75  YFALPQIGIRFNIFWSAVVALTIFESAMLSEIFRAGLNAVPKGQMEAGLSTGLSYVQVLR 134

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-TGQAIEIILIWM 371
            +++PQA ++++P + SQ ++L+K++SLAV +   +L      I  Q T   + + L   
Sbjct: 135 SIVMPQAFKAMLPAIVSQLISLIKDTSLAVIISLPELTHHARIIYGQNTNYVLPMFLAMT 194

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            +Y  +   ++L    L A+
Sbjct: 195 VLYFIVCYALSLLSRFLEAR 214



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 42/102 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  ++   +I + +IG L G  R +     + I  V ++V RN+P L++I
Sbjct: 12  LRFLIDGLRVTIEVSVLSIIFSFLIGGLAGVLRFTNIPFFSKILGVVIDVIRNLPLLLII 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           FF Y ++  +    +        + +    +         NA
Sbjct: 72  FFTYFALPQIGIRFNIFWSAVVALTIFESAMLSEIFRAGLNA 113


>gi|165977126|ref|YP_001652719.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877227|gb|ABY70275.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 219

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R +    +T+  +    + S V G+++++        +  K    L   
Sbjct: 1   MNWSYVVNAIPRFIDAAIITLQLSFWGILLSLVFGLLIAIVT-----AYQVKPFYGLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y            +          F    IAL    A+++A
Sbjct: 56  YIE--LSRNTPLLIQLFFLYY-----------SLPKIGIKWDGFTCGIIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQTEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           AV  A+L+ V   II    +  E + +    YL + + I+L       K
Sbjct: 163 AVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFENK 211



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F G++ + + G L+        K    + R Y+E+ RN P L+ +FFL
Sbjct: 13  FIDAAIITLQLSFWGILLSLVFGLLIAIVTAYQVKPFYGLARGYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y S+  +   
Sbjct: 73  YYSLPKIGIK 82


>gi|239818199|ref|YP_002947109.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239804776|gb|ACS21843.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 222

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 17/237 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            D +      +      L    +T    A  F  +  +G++++L A   SR     T   
Sbjct: 1   MDFTWDFSAVLQHWPVLLKGVGVTAGLWAVAFPSAMAIGLLIALGARSKSRLVGAAT--- 57

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                    L   +P L+ +   +           F  + G  ++P +++  +ALS   +
Sbjct: 58  ----RGYMELFRNIPILIQLVWFFY---------AFPILTGWQLTP-YVAALLALSLNAS 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI R G+ ++P GQ E A ALG+   +  R V+LPQ ++ ++P  T++ + L KN+
Sbjct: 104 AYCSEIFRGGIASLPAGQWEGARALGMRRVQVLRRVVLPQVLKRMLPAFTNRGIELAKNT 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           S+A  +   +L+  G  +     + +EI+     +Y  L    A   +RL  ++AL+
Sbjct: 164 SIASVIAVHELMYQGRALSAAYYRPLEILTAVAVVYFVLIYPGAYAASRLEKRLALR 220



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 38/87 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   +   +L G   T  L       A  IG L+  G  S ++LV    R Y+E+FR
Sbjct: 6   DFSAVLQHWPVLLKGVGVTAGLWAVAFPSAMAIGLLIALGARSKSRLVGAATRGYMELFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           NIP L+ + + + +   +        V
Sbjct: 66  NIPILIQLVWFFYAFPILTGWQLTPYV 92


>gi|78779550|ref|YP_397662.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           MIT 9312]
 gi|78713049|gb|ABB50226.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Prochlorococcus marinus str. MIT 9312]
          Length = 297

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 16/257 (6%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
             +       P        P     ++       +    + K+ + S VL   +      
Sbjct: 37  IGFNFNWLTKPASFSLAEHPLPYSPSDSYAWALFMGWMNSLKVIISSLVLASFIGTLIGF 96

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF------------ 254
           L R       + +   YI+  +I   P L+ +   Y + F       F            
Sbjct: 97  L-RVGKNSFFRIITAGYIT--VIRQTPLLIQLMCWYFVGFLSIRNNSFLNLSNVVNISNK 153

Query: 255 -NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
              + G  +S EF +L   LS +++AFIAE++R G+ +VP GQ EA  +LG++ ++    
Sbjct: 154 GIELFGLNLSSEFSALLFGLSIFSSAFIAEVIRGGIQSVPVGQWEAFRSLGISEKQGFIK 213

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQA+ + IP LTSQYLNL KNS+LA+A+G+AD+ ++  TIINQTG+A+E  +I +  
Sbjct: 214 IIIPQALPAFIPGLTSQYLNLAKNSTLAIAIGYADIYAINDTIINQTGRAVECFMILLCS 273

Query: 374 YLSLSIMIALFMNRLNA 390
           +L L+++I   M  ++ 
Sbjct: 274 FLILNLVITKVMGIIDK 290



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            +   I  QI+L   +        NN+  N+ ++ +     +L++ A F + +  +PY+ 
Sbjct: 2   SKNKKIFFQILLVFGVLGFLGILTNNLIINLTRTGIGFNFNWLTKPASFSLAEHPLPYSP 61

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             SYA A+ +G++N+  +  S ++ A+ IGTL+G  R+  N     I   Y+ V R  P 
Sbjct: 62  SDSYAWALFMGWMNSLKVIISSLVLASFIGTLIGFLRVGKNSFFRIITAGYITVIRQTPL 121

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPF------GMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           L+ +   Y      +       +         G+ L    LS     +     IF  +F+
Sbjct: 122 LIQLMCWYFVGFLSIRNNSFLNLSNVVNISNKGIELFGLNLSSEFSALLFGLSIFSSAFI 181

Query: 196 LGIVLS 201
             ++  
Sbjct: 182 AEVIRG 187


>gi|254251720|ref|ZP_04945038.1| hypothetical protein BDAG_00916 [Burkholderia dolosa AUO158]
 gi|124894329|gb|EAY68209.1| hypothetical protein BDAG_00916 [Burkholderia dolosa AUO158]
          Length = 237

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 88/214 (41%), Gaps = 4/214 (1%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           +    +     + V S  LG  LS+    ++R   +K       LY  T++  G P  V 
Sbjct: 18  YRFTGVAITLWLLVVSIGLGFCLSVPL-AVARVSKKKWLSGAVWLY--TYVFRGTPLYVQ 74

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           + L Y   +   V+     +  +          +A +  T A+  EI    + A   G++
Sbjct: 75  LLLCYTGLYSLQVVRGTPML-DAFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATTYGEI 133

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A G++     R V+LP A+R  +P  +++ + +L  +++A      D++ +   + 
Sbjct: 134 EAARAYGMSTFTMYRRVILPSALRRSLPLYSNEVILMLHATTVAFTATVPDILKIARDVN 193

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + T  +     I   +YL +S  +     +   +
Sbjct: 194 SATYMSFHAFGIAALLYLMISFTLVWLFRQAERR 227



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  K ++    +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGVAITLWLLVVSIGLGFCLSVPLAVARVSKKKWLSGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQVVRGTPMLDAFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|288960221|ref|YP_003450561.1| ABC transporter permease protein [Azospirillum sp. B510]
 gi|288912529|dbj|BAI74017.1| ABC transporter permease protein [Azospirillum sp. B510]
          Length = 221

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 12/189 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R    +        ++  F     P LV +      ++  PVL        +  +    
Sbjct: 44  ARISPRRWVAWPARGFVELF--RNTPVLVQLI---WFYYALPVLSGIQLPAFAAAALALS 98

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
               A       + AEI R G+ +VP GQ EA  ALG+   +  R ++LP A+R ++P  
Sbjct: 99  LNASA-------YYAEIYRGGIQSVPAGQWEAGRALGMGRVRLLRRIILPLAVRRMVPAF 151

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           T++ + L KN+S+A  +   +L+       +Q    +E   +   IY  L     L    
Sbjct: 152 TNRAVELAKNTSVASIITVHELMYTARLFSSQNYIPMETFTVVAMIYFLLIYPFTLASYA 211

Query: 388 LNAKIALKE 396
           L  + A   
Sbjct: 212 LERRFAAGR 220



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 37/95 (38%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            R+S  + VAW  R +VE+FRN P LV + + Y ++  +  I   +          N   
Sbjct: 44  ARISPRRWVAWPARGFVELFRNTPVLVQLIWFYYALPVLSGIQLPAFAAAALALSLNASA 103

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
            +  +       +    +  G  L +   RL R  
Sbjct: 104 YYAEIYRGGIQSVPAGQWEAGRALGMGRVRLLRRI 138


>gi|148273186|ref|YP_001222747.1| putative glutamate ABC transporter, permease [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831116|emb|CAN02068.1| putative glutamate ABC transpoter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 215

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 19/223 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L     T+       +F+  LG+V++       R     + +A   +Y+          
Sbjct: 11  FLRGFGGTLRLLGLTVLFALPLGVVIAAM-----RISPVASLRATSTVYVELLRNTP--- 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+L+   + +               S   P   +  +AL+ YTA F AE +RSG+ +VP 
Sbjct: 63  LLLVFTFFSV----------VITSISGALPFMTAAVLALTLYTAPFFAEAIRSGINSVPV 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++GLT  +    V+LPQA+R++IPPL +  + L KN+S+A A    +L +VG 
Sbjct: 113 GQAEAARSIGLTFSQTLGSVILPQAVRTVIPPLINVVIALTKNTSIAGAYFIYELFNVGR 172

Query: 355 TIINQTGQAIE-IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + N  G A+  + +   F YL +++ +    + L  ++A+  
Sbjct: 173 DVANANGNAVVWVFVGVAFFYLIITVPLGQLADHLEKRVAVSR 215



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               L GF  T  L    ++ A  +G ++ A R+S    +     VYVE+ RN P L+V 
Sbjct: 8   LDVFLRGFGGTLRLLGLTVLFALPLGVVIAAMRISPVASLRATSTVYVELLRNTPLLLVF 67

Query: 146 FFLYKSVLSV 155
            F    + S+
Sbjct: 68  TFFSVVITSI 77


>gi|91209695|ref|YP_539681.1| GltJ subunit of glutamate ABC transporter [Escherichia coli UTI89]
 gi|91071269|gb|ABE06150.1| GltJ, subunit of glutamate ABC transporter [Escherichia coli UTI89]
 gi|307627915|gb|ADN72219.1| glutamate and aspartate transporter subunit [Escherichia coli
           UM146]
          Length = 246

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|52840737|ref|YP_094536.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52627848|gb|AAU26589.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 221

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 85/195 (43%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIVL++             G  L +        F +   + I     L      +     
Sbjct: 20  GIVLTMQLLTGGMLIGVLLGSLLSICRHQGIACFVINRFISILRGTPLILQLSFIYFAVP 79

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +         ++  +A    ++A+ AEI+R+G+ ++P+GQ EAA+ L +      + ++L
Sbjct: 80  VLLGMRPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALTLQIPSFYLWKDIIL 139

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQ +R+I P + ++ + LLK ++L   +G  DL+    T+  Q       + I  F Y S
Sbjct: 140 PQVVRNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFTYFMPLCITGFYYYS 199

Query: 377 LSIMIALFMNRLNAK 391
           L +++     ++  +
Sbjct: 200 LVLLLEALGKKIEKR 214


>gi|148261727|ref|YP_001235854.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidiphilium cryptum JF-5]
 gi|326405221|ref|YP_004285303.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
 gi|146403408|gb|ABQ31935.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidiphilium cryptum JF-5]
 gi|325052083|dbj|BAJ82421.1| putative ABC transporter permease protein [Acidiphilium multivorum
           AIU301]
          Length = 242

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 103/240 (42%), Gaps = 16/240 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    + +   +   + +     + V + ++G+V+ L A            +    
Sbjct: 9   QQTFFDAHMIAHVMPTLLRVGLPNTILLAVLASLIGMVVGL-AIATGLLARPAVVRLACR 67

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+       L  L  I   Y +    P+ G   F      +  +    +++     A++
Sbjct: 68  VYVDI-----LRGLPHILTIYLIGQGLPIAGLSLF-----GNDTYAYAALSIGLIEGAYM 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R+GL +V RGQ+EAA  LG+T  +  R ++LPQ +R ++PPLT Q++ ++K ++L 
Sbjct: 118 AEIFRAGLQSVERGQIEAARTLGMTRWQTMRDIILPQGIRRVLPPLTGQFILVIKGTALV 177

Query: 342 VAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +G      ++ S+           +  +     +YL+L++ +   +N    ++  + +
Sbjct: 178 FLLGLTSSQREIFSIAQD-SAINNANLSPLTAAGILYLALTVPMTYAVNAWERRLRGERQ 236



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 4/189 (2%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VG  NT  LA    +   ++G  +  G L+   +V   CRVYV++ R +P ++ I+ + +
Sbjct: 28  VGLPNTILLAVLASLIGMVVGLAIATGLLARPAVVRLACRVYVDILRGLPHILTIYLIGQ 87

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
            +         +    +               +       V    +    +L  TR    
Sbjct: 88  GLPIAGLSLFGNDTYAYAALSIGLIEGAYMAEIFRAGLQSVERGQIEAARTLGMTRWQTM 147

Query: 211 FHEK----TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
                     + LP L     L+     LV +        +   + Q + I  + +SP  
Sbjct: 148 RDIILPQGIRRVLPPLTGQFILVIKGTALVFLLGLTSSQREIFSIAQDSAINNANLSPLT 207

Query: 267 MSLYIALSC 275
            +  + L+ 
Sbjct: 208 AAGILYLAL 216


>gi|331701267|ref|YP_004398226.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329128610|gb|AEB73163.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 214

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 97/216 (44%), Gaps = 19/216 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S  LG ++ L          +K      LL    +++ G P L
Sbjct: 13  LSGTKMTLSIFFWTLICSIPLGALVGLGLI-------QKFKPLTWLLNFYVWIMRGTPLL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V   + +   A      A+  EI R G  +VP+G
Sbjct: 66  LQLIFVF---YGLPIIH--------IVFQRYDAAMFAFILNYTAYFGEIFRGGFQSVPKG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  L L++ +  R +++PQ  + ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 115 QFESAKVLRLSYGQTIRKIVIPQVFKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNV 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +  +++   IYL+L+ +  + +  +  +
Sbjct: 175 ATARD-VTLLPLILVGIIYLALTAVCTIVLKLIEKR 209



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 38/100 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                A+L G   T  + F  +I +  +G LVG G +   K + W+   YV + R  P L
Sbjct: 6   QEILPALLSGTKMTLSIFFWTLICSIPLGALVGLGLIQKFKPLTWLLNFYVWIMRGTPLL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           + + F++  +  +  +        F   LN          
Sbjct: 66  LQLIFVFYGLPIIHIVFQRYDAAMFAFILNYTAYFGEIFR 105


>gi|260461732|ref|ZP_05809978.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785284|ref|YP_004144760.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032373|gb|EEW33638.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171172|gb|ADV14710.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 250

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 3/211 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V +F LG+++ +      + +     +   LL + T LI  +P LVLI L Y    
Sbjct: 37  IGIGVGAFALGLLIGI-GGAFGKLYGGPVRRD--LLQVYTTLIRAVPELVLILLIYFAVP 93

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G       M+  +AL     A+  E++R  ++AVP+GQ+EA  A G+ 
Sbjct: 94  DLINRLLDTLGYGRIDVSGPMAGIVALGFVQGAYATEVLRGAILAVPQGQIEAGRAFGMN 153

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R + +P  +   IP L + +L   K ++L   VGF +L          T      
Sbjct: 154 PTMLMRRITMPAMLPFAIPGLANLWLVAFKGTALLAVVGFNELTLETRQAAGTTKAYFTF 213

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +    +YL L+++  + + R+        +
Sbjct: 214 FMAAGVLYLLLTLISNVLIGRVEHWARRGRQ 244


>gi|332111812|gb|EGJ11792.1| putative ABC transporter protein glutamate/aspartate transmembrane
           subunit [Rubrivivax benzoatilyticus JA2]
          Length = 245

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 11/228 (4%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG   +   L++          +   + ++ +V       L R   ++        +   
Sbjct: 22  FGRGGDITYLNWLMSAWGWTLSVSALALIVALVFGSLMGIL-RTTPDRRLVWFGNAWTEL 80

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV I L Y                     P F+ +  AL  +T+A I+E VR
Sbjct: 81  F--RNIPLLVQIFLWY--------HALPALFKPLQAFPSFVLVVFALGFFTSARISEQVR 130

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+PPLTS+ +N++KNSS+A AV  
Sbjct: 131 AGIQSLPRGQRYAGLAMGLTLPQTYRYVLLPMAFRIIVPPLTSEAMNIIKNSSVAFAVSI 190

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+L         +T + IE+ L    +Y   +  I      +  ++ +
Sbjct: 191 AELTMFALQAGEETSRNIEMYLAVTVLYFFSAFAINRVALVIENRVRV 238



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 42/87 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++  +  T  ++   +I A + G+L+G  R + ++ + W    + E+FRNIP LV
Sbjct: 29  TYLNWLMSAWGWTLSVSALALIVALVFGSLMGILRTTPDRRLVWFGNAWTELFRNIPLLV 88

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            IF  Y ++ ++             +F
Sbjct: 89  QIFLWYHALPALFKPLQAFPSFVLVVF 115


>gi|168207981|ref|ZP_02633986.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens E str. JGS1987]
 gi|182627284|ref|ZP_02954973.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens D str. JGS1721]
 gi|170660732|gb|EDT13415.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens E str. JGS1987]
 gi|177907297|gb|EDT70025.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens D str. JGS1721]
          Length = 213

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 19/229 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + L    +     T+       + S  LGI++++      R  + K    +  LY+
Sbjct: 1   MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAIL-----RLSNIKIVNFISSLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ +   +   F  P++              F +  IA +   AA+  EI
Sbjct: 56  --LVMRGTPLLLQLIFIF---FGLPII--------GVSIDRFPAAIIAFTLNYAAYFGEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+  + +GQ EA+  LGL+     + ++LPQ+ +  +P + ++ + L+K++SL   V
Sbjct: 103 FRSGIKDIDKGQFEASKILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVV 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +L+  G    N+    + + LI +   L L  ++    NRL  K +
Sbjct: 163 GIGELLRAGKIASNRDASLLPLFLIGIIY-LLLIGILTKIFNRLEKKYS 210



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G  NT  +    ++ +  +G +V   RLS  K+V +I  +YV V R  P L+ + F+
Sbjct: 11  IIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  +  +    D          LN 
Sbjct: 71  FFGLPIIGVSIDRFPAAIIAFTLNY 95


>gi|92112665|ref|YP_572593.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795755|gb|ABE57894.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 243

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 9/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F      +    T+   A   V  F L +V ++   R  R           L+   T ++
Sbjct: 10  FYQKALWTGFVNTLWLVAVSAVCGFALAVVFAVTRLRGPRPLAM-------LVTGVTTVV 62

Query: 230 FGLPTLVLIALKY-QLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            G P LV +   Y  +    P +      +    +   F    +  +    A+  E++R 
Sbjct: 63  RGTPLLVQLFFFYDGVGRLLPEIPGVRESLIWPLLRDPFFYGALTFTLSVGAYTGEVLRG 122

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L++VP G++ A  A GL   +    + LP+A++  +P LT + + LLK+  L   +   
Sbjct: 123 ALLSVPEGELAAGRAFGLNRWQILYRLWLPRAIQMCLPTLTGELILLLKSVPLVSTIALM 182

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           DL+     + ++T    E +L+   IYL+L++++   M  +  + 
Sbjct: 183 DLLKAANMVRDETFLVYEPLLLIAGIYLALTLVLTSVMRLIEQRF 227



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +D  Y  A+  GFVNT WL     +    +  +    RL   + +A +      V R 
Sbjct: 5   WLTDPFYQKALWTGFVNTLWLVAVSAVCGFALAVVFAVTRLRGPRPLAMLVTGVTTVVRG 64

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P LV +FF Y  V  +LP             L      +  LT   +   +    + G 
Sbjct: 65  TPLLVQLFFFYDGVGRLLPEIPGVRESLIWPLL-RDPFFYGALTFTLSVGAYTGEVLRGA 123

Query: 199 VLSLFATRLS--RHFHEKTGKALPLLYISTFLIFGLPTL 235
           +LS+    L+  R F     + L  L++   +   LPTL
Sbjct: 124 LLSVPEGELAAGRAFGLNRWQILYRLWLPRAIQMCLPTL 162


>gi|255261957|ref|ZP_05341299.1| histidine transport system permease protein HisQ [Thalassiobium sp.
           R2A62]
 gi|255104292|gb|EET46966.1| histidine transport system permease protein HisQ [Thalassiobium sp.
           R2A62]
          Length = 237

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 2/222 (0%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F +                + ++S  LG+V+ L    L +       +     Y      
Sbjct: 10  FGSTGWGDDLLRGAWITITLALWSMTLGLVMGLGLAAL-KLSRFVLLRWFAEGYTLFIRG 68

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                ++LI           +L  F     + V P+F++    LS   AA+  EI R   
Sbjct: 69  MPEFLILLIVFFGSDQLINALLNAFGSDARAEV-PKFVAAVAGLSAIFAAYACEIFRGAY 127

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AVP GQ+EAA A+GL+  K  R V  PQ  R  IP L + ++ +LK++SLA  +   +L
Sbjct: 128 LAVPAGQIEAAQAVGLSVGKVFRRVRFPQMWRYAIPGLGNLWMVVLKDTSLAAVIALDEL 187

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +        G+ +        +YL ++++  L       +
Sbjct: 188 LRISKLGGETEGRQLTFFAAAGALYLMMTLLSDLGRAWAEQR 229



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  LA   M    ++G  + A +LS   L+ W    Y    R +P  ++
Sbjct: 15  WGDDLLRGAWITITLALWSMTLGLVMGLGLAALKLSRFVLLRWFAEGYTLFIRGMPEFLI 74

Query: 145 IFFLYKSV 152
           +  ++   
Sbjct: 75  LLIVFFGS 82


>gi|91789744|ref|YP_550696.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698969|gb|ABE45798.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 222

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 17/220 (7%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           +    ++   A   +   + G +L+L      +           L+  +TF + G+ ++ 
Sbjct: 20  NGFIFSIQLTAIATLGGIIFGTILALMRLSGRKF----------LMLPATFYVNGMRSVP 69

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+ +    +   P L               +S  I    + AA+ +EI+R+G+ ++ RGQ
Sbjct: 70  LVMVILWFYLLVPTLIGRPIGAE-------LSAIITFVAFEAAYFSEIMRAGIQSISRGQ 122

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           + A  ALG+T+ +  RLV+LPQA R+++P L +Q + L +++SL  A+G  DL+    T 
Sbjct: 123 VHAGQALGMTYGQNMRLVVLPQAFRNMVPILLTQTIILFQDTSLVYAIGAYDLLKGLTTA 182

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               G+  E  L+   +Y  +   ++  + +L  KIA+  
Sbjct: 183 GKIYGRPEEAYLLAAVVYFVMCFGLSYVVKQLQNKIAIVR 222



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 64/170 (37%), Gaps = 2/170 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +    +  +  GF+ +  L     +   I GT++   RLS  K +      YV   
Sbjct: 6   LSFLNWDIISRFVKNGFIFSIQLTAIATLGGIIFGTILALMRLSGRKFLMLPATFYVNGM 65

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R++P ++VI + Y  V +++  P  + +     F+      F  +       I       
Sbjct: 66  RSVPLVMVILWFYLLVPTLIGRPIGAELSAIITFVAFEAAYFSEIMRAGIQSISRGQVHA 125

Query: 197 GIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           G  L +   +  R     +     +P+L   T ++F   +LV     Y L
Sbjct: 126 GQALGMTYGQNMRLVVLPQAFRNMVPILLTQTIILFQDTSLVYAIGAYDL 175


>gi|150017368|ref|YP_001309622.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149903833|gb|ABR34666.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 221

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           K+ +   +L +V+ L    +  +F  +    +   YI   L    P 
Sbjct: 11  NLPLYEKAAWLTLKLAIVGILLSLVIGLL-CGIILYFKVRVLDKIVQAYIE--LSRNTPL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   + L+F  P L             E     I L+    +++AE  RSG+ AV +
Sbjct: 68  LVQI---FFLYFGLPKL--------GFKMGEATCAIIGLAFLGGSYMAEAFRSGVEAVSK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+E+ I++GL+  +  R V++PQA    +P +++  + LLK +S+  A+   DL ++  
Sbjct: 117 TQIESGISIGLSKGQLIRYVIIPQAFSVSMPSISANCIFLLKETSVLGAISIMDLTNLTK 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I    +  E + + + IYL + + ++  M+ +  K+   E
Sbjct: 177 DLIGMYYRTFESLSLLVLIYLIMILPLSFLMSWIERKVRYAE 218



 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 37/92 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA  G++ + +IG L G       +++  I + Y+E+ RN P LV IFFLY  +  +
Sbjct: 22  TLKLAIVGILLSLVIGLLCGIILYFKVRVLDKIVQAYIELSRNTPLLVQIFFLYFGLPKL 81

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                 +     G+                 A
Sbjct: 82  GFKMGEATCAIIGLAFLGGSYMAEAFRSGVEA 113


>gi|187921591|ref|YP_001890623.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187720029|gb|ACD21252.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 225

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 6/211 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M    +I   + + G++       L R   ++  +     Y++ F       LV++ L +
Sbjct: 20  MGVTLQITFVAILCGLLWGTVLAVLHR-SPQRAVRVFAQGYVALFRSIP---LVMLLLWF 75

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L   + +   FN   G  V    +S  +A S   AAF  EI+R+G+ ++PRGQ +AA+A
Sbjct: 76  FLIVPQFLKALFNLPAGVDVR--LISAMVAYSLLEAAFFCEIIRAGIESLPRGQAQAALA 133

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T  +  R V+LPQA R+++P   +Q + + +++SL   +   D       I  + G 
Sbjct: 134 LGMTAGQTMRYVILPQAFRAMVPVALTQCIVIFQDTSLVYVIALGDFFRRVSAIGERDGT 193

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + ++L     Y S++  + + +  +  ++A
Sbjct: 194 VVPMLLFAGVAYWSITTGLTVTVKVVRTRLA 224



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 31/66 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  + F  ++   + GT++     S  + V    + YV +FR+IP ++++ + +
Sbjct: 17  LAGMGVTLQITFVAILCGLLWGTVLAVLHRSPQRAVRVFAQGYVALFRSIPLVMLLLWFF 76

Query: 150 KSVLSV 155
             V   
Sbjct: 77  LIVPQF 82


>gi|92117597|ref|YP_577326.1| amino acid ABC transporter permease [Nitrobacter hamburgensis X14]
 gi|91800491|gb|ABE62866.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Nitrobacter hamburgensis X14]
          Length = 506

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 20/233 (8%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +N R      +T+  +    V S  +GI L+L      R       +   + +I  +  
Sbjct: 288 IVNTRLWGGLLVTLVVSVTGIVASIPIGIALAL-----GRRSTIPLIRIFSIAFIEFWRG 342

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             L T VL    Y L           F+ G+      + + I ++ +  A+ AE++R GL
Sbjct: 343 IPLIT-VLFFATYMLPL---------FLPGNFTVDGLVRVLIGVALFAGAYNAEVIRGGL 392

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRGQ EAA ALGL++ K T L+++PQA+R +IP L + ++ L K++SL   V   DL
Sbjct: 393 AAIPRGQAEAAHALGLSYWKTTGLIVMPQALRHVIPGLVNSFIALFKDTSLVSIVALFDL 452

Query: 350 VSV-----GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +                           IY      ++ +   +  ++    +
Sbjct: 453 LGSLRASFADPTWATPTTLFTGFAFAGIIYFVFCFGMSRYSLFVEHRLNAHRR 505


>gi|152986120|ref|YP_001349969.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PA7]
 gi|150961278|gb|ABR83303.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PA7]
          Length = 229

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 4/191 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLH 245
           A + +   +L ++L++    L   F     + L     +   ++ G+P LVLI L +   
Sbjct: 13  AWLTLQLALLSMLLAIMLGLLGAAFRLSPVRWLAWCGDLYATVVRGIPDLVLILLIFYGG 72

Query: 246 --FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 V  QF +     ++P F+S    L     A+++E  R   +A+P+GQ EA  A 
Sbjct: 73  QALLNWVAPQFGYDDYIDLNP-FVSGVGTLGFIFGAYLSETFRGAFMAIPKGQGEAGYAY 131

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++HR+    V +PQ +R  IP  T+ +L L+K ++L   VG  D++       + T + 
Sbjct: 132 GMSHRQVFFRVQVPQMIRLAIPGFTNNWLVLVKATALISVVGLQDMMFKAKQASDATREP 191

Query: 364 IEIILIWMFIY 374
               L    +Y
Sbjct: 192 FTYYLAVAGLY 202



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 40/90 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I+ G   T  LA   M+ A ++G L  A RLS  + +AW   +Y  V R IP LV+
Sbjct: 5   YGATIVDGAWLTLQLALLSMLLAIMLGLLGAAFRLSPVRWLAWCGDLYATVVRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           I  ++    ++L            + LN  
Sbjct: 65  ILLIFYGGQALLNWVAPQFGYDDYIDLNPF 94


>gi|224371422|ref|YP_002605586.1| GltJ2 [Desulfobacterium autotrophicum HRM2]
 gi|223694139|gb|ACN17422.1| GltJ2 [Desulfobacterium autotrophicum HRM2]
          Length = 240

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 3/229 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    + +       +     + T   + + ++ + +VL +      R FH K  +AL L
Sbjct: 3   NYTFDWSVLWRQPYGAMMLSGIWTTLTLSLAAWCVAVVLGIGVAA-CRVFHNKCLRALGL 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F    +P LV +   Y            +++  +     F      L  YTA+ +
Sbjct: 62  GYVLVF--RNIPFLVQLFFWYFAAPLLLPRSIQDWMYDTVPEYAFWCGATGLGMYTASRV 119

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+G +A+   Q  AA A GL   +    V+LP A R IIP  T+++L   KNS+L 
Sbjct: 120 AEQFRAGFLAISEDQYRAAYATGLRPAQVYGYVILPYAFRIIIPAFTTEFLTCFKNSALT 179

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           + +G  ++      I + T   +E        YL+++  +AL M R+  
Sbjct: 180 MTIGVMEITHTAYIIDSFTWHGLETTTAASLCYLTIAQGVALVMWRIEK 228



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 39/85 (45%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   +L G   T  L+ +    A ++G  V A R+  NK +  +   YV VFRNIP 
Sbjct: 13  RQPYGAMMLSGIWTTLTLSLAAWCVAVVLGIGVAACRVFHNKCLRALGLGYVLVFRNIPF 72

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLP 166
           LV +FF Y +   +LP      +  
Sbjct: 73  LVQLFFWYFAAPLLLPRSIQDWMYD 97


>gi|50121594|ref|YP_050761.1| arginine transporter permease subunit ArtM [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612120|emb|CAG75570.1| arginine transport system permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 222

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 81/174 (46%), Gaps = 3/174 (1%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L  G P LV I L Y        + Q  ++      P ++   +AL+  +AA+  ++
Sbjct: 51  YITLFTGTPLLVQIFLIYYGPGQFTSIQQIPWLWSLLSQP-WLCAMVALALNSAAYTTQL 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
               + A+P GQ ++  ALG+  ++    +LLP A +  +   +++ + + K++SLA  +
Sbjct: 110 FYGAVKAIPAGQWQSCAALGMNQKQTL-RILLPFAFKRALSSYSNEVVLVFKSTSLAYTI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++     +  +T   + +      IYL ++ ++ L M  +  +  + E++
Sbjct: 169 TLMEVMGYSQLMYGRTYDVM-VFGAAGIIYLCVNGLLTLLMRWVERRSLVFERR 221


>gi|307306766|ref|ZP_07586507.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306902057|gb|EFN32655.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 220

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R        +  +  +   + + G V+ L  T           +    LY++  +I   
Sbjct: 11  WRSFDLLLEGLALSLGLAFVAILAGCVIGLI-TAFGLISRRALLRKPAGLYVT--VIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+   Y           F          +  S    L+ Y+ A++AE+ R GLIA+
Sbjct: 68  PILVLVLFSY-----------FALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EA +A+GLT  +    +++P  +RS++P L S  ++L K++SLA A+   +L   
Sbjct: 117 PPGQREAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFE 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  +T + +E  ++   +Y++   ++A  M     ++A+  
Sbjct: 177 ARKINVETFRVVETWIVASCLYVATCSLLAALMRAAERRLAVPR 220



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           AF  ++   +IG +   G +S   L+     +YV V RN P LV++ F Y ++  +    
Sbjct: 28  AFVAILAGCVIGLITAFGLISRRALLRKPAGLYVTVIRNTPILVLVLFSYFALPELGVRL 87

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                    + + +             A 
Sbjct: 88  GKIESFVATLAIYSGAYLAEVFRGGLIAI 116


>gi|300927241|ref|ZP_07142972.1| putative ATP synthase F0, A subunit [Escherichia coli MS 182-1]
 gi|300951154|ref|ZP_07165018.1| putative ATP synthase F0, A subunit [Escherichia coli MS 116-1]
 gi|300996683|ref|ZP_07181508.1| putative ATP synthase F0, A subunit [Escherichia coli MS 200-1]
 gi|300304461|gb|EFJ58981.1| putative ATP synthase F0, A subunit [Escherichia coli MS 200-1]
 gi|300416791|gb|EFK00102.1| putative ATP synthase F0, A subunit [Escherichia coli MS 182-1]
 gi|300449583|gb|EFK13203.1| putative ATP synthase F0, A subunit [Escherichia coli MS 116-1]
 gi|315292093|gb|EFU51445.1| putative ATP synthase F0, A subunit [Escherichia coli MS 153-1]
 gi|324006309|gb|EGB75528.1| putative ATP synthase F0, A subunit [Escherichia coli MS 57-2]
 gi|324010471|gb|EGB79690.1| putative ATP synthase F0, A subunit [Escherichia coli MS 60-1]
          Length = 253

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 18/256 (7%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFA 204
           FF  + +             PFG       +          +   ++ +F++G    +  
Sbjct: 2   FFWSRFMSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILR 61

Query: 205 TRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           T  +R        + +  + +PL+         +P L+   +      +     QF    
Sbjct: 62  TVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQF---- 117

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                  F+S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP 
Sbjct: 118 -------FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPN 170

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++
Sbjct: 171 AYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLIN 230

Query: 379 IMIALFMNRLNAKIAL 394
             I L M  +  K+ L
Sbjct: 231 AFIMLVMTLVERKVRL 246



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P +V
Sbjct: 27  TYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIV 86

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
             F  Y  +  +LP      
Sbjct: 87  QFFTWYLVIPELLPEKIGMW 106


>gi|169334070|ref|ZP_02861263.1| hypothetical protein ANASTE_00463 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258787|gb|EDS72753.1| hypothetical protein ANASTE_00463 [Anaerofustis stercorihominis DSM
           17244]
          Length = 216

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 100/219 (45%), Gaps = 11/219 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             +  +  M T+ +IFV + +  + L L      R       + L  +YIS  ++ G P 
Sbjct: 6   MFTDLSSGMVTSIEIFVLTLLFSLPLGLVV-AFGRMSKIAPVRWLVKIYIS--IMRGTPL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ + + +   +       + F    + S   +++ I  +   AA+ AEI R G+ ++P 
Sbjct: 63  MLQLMVVFWGPY-------YIFGMQISSSYRMVAVLIGFAVNYAAYFAEIYRGGIESMPD 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA  LG    +   +++ PQ ++ I+P   ++ + L+K++SL+  +   ++ ++  
Sbjct: 116 GQYEAAKLLGYNKFQTFFIIIFPQVIKRILPATANEVITLVKDTSLSFVIAIPEMFTMAK 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I      ++   +     Y   + ++A  M  +  K++
Sbjct: 176 QIAAA-QSSVAAFIAAGLFYYIFNFIVAFVMEGIEKKLS 213



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 31/61 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V +  +    ++ +  +G +V  GR+S    V W+ ++Y+ + R  P ++ +  +
Sbjct: 10  LSSGMVTSIEIFVLTLLFSLPLGLVVAFGRMSKIAPVRWLVKIYISIMRGTPLMLQLMVV 69

Query: 149 Y 149
           +
Sbjct: 70  F 70


>gi|50121972|ref|YP_051139.1| histidine ABC transporter permease [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612498|emb|CAG75948.1| histidine ABC transporter permease protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 229

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 72/175 (41%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T LI G+P LVL+ L +            +            +  I L     A+  E
Sbjct: 51  CYTTLIRGIPDLVLMLLIFYGLQIVLNGVTESIGLEQIDIDPLTAGVITLGFIYGAYFTE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + +  +LK ++L   
Sbjct: 111 TFRGAYLAVPRGQIEAAVAFGFSPIKVFRRILFPSMMRFALPGIGNNWQVILKATALVSL 170

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  D++         T +     L+   +YL  + +    +  L    +   KK
Sbjct: 171 LGLNDVIKATQLAGKGTHEPFYFALVAGAMYLIFTTVSNGVLWWLERHYSQGVKK 225


>gi|330431656|gb|AEC16715.1| arginine transporter permease subunit ArtM [Gallibacterium anatis
           UMN179]
          Length = 226

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 6/225 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     + T+  + V + V+   L++  T L         K +  +YI+ F   G 
Sbjct: 3   QEYFVTIAQGIPTSLLLTVVALVIAFFLAILFTFLLA-LGNPIIKKIIGVYITLFT--GT 59

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I L Y            +    S +S  +    +AL+  +AA+  ++    + A+
Sbjct: 60  PLLVQIFLIYSGP--GQFQWIVDGPLWSLLSNAWFCAMLALALNSAAYSTQLFYGAVKAI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ E+  ALGL+  +    +L+P A++  +P  T++ + + K +SLA  +   D++  
Sbjct: 118 SKGQWESCAALGLSRAQTL-KILIPYALKRALPSYTNEIILVFKGTSLASTITIMDIMGY 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +      A+ I  +   IYL ++ +   F+ +L  ++ + E+
Sbjct: 177 ARQLYGTEYNALLIYGLAGVIYLVITGVATYFLRKLEQRVLVFER 221


>gi|330811618|ref|YP_004356080.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379726|gb|AEA71076.1| Putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 218

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 14/229 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + L            I +  F++ IVL LF   + R   +          I  
Sbjct: 4   FDWSYAAQILPDLLRASLNTVGITLIGFLIAIVLGLFL-AIGRRSRKFWLSWPATAVIEF 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             I   P L+ +   Y +  +  +      +G            + +  + A +IAE+ R
Sbjct: 63  --IRSTPLLIQVYFLYYVLPNYGLSLTAMQVG-----------ILGIGLHYACYIAEVYR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SGL AVPR Q EA  AL +    A R ++LPQA+R I+PPL +  + +LK++ +  A+  
Sbjct: 110 SGLDAVPRAQWEAVTALNIAPYDAYRNIILPQALRPIVPPLGNYLVAMLKDTPVLSAITV 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +++     I ++  + +E I +    +L+LS+ +A  + RL  ++ L+
Sbjct: 170 VEIMQQAKNIGSENFRYLEPITMVGLFFLALSLALAYLVRRLETRMELR 218



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  ++  +     +L   +NT  +   G + A ++G  +  GR S    ++W     +E
Sbjct: 2   TLFDWSYAAQILPDLLRASLNTVGITLIGFLIAIVLGLFLAIGRRSRKFWLSWPATAVIE 61

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             R+ P L+ ++FLY  + +         V   G+ L+             +A
Sbjct: 62  FIRSTPLLIQVYFLYYVLPNYGLSLTAMQVGILGIGLHYACYIAEVYRSGLDA 114


>gi|330821191|ref|YP_004350053.1| amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
 gi|327373186|gb|AEA64541.1| amino acid ABC transporter, permease protein [Burkholderia gladioli
           BSR3]
          Length = 223

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 100/227 (44%), Gaps = 20/227 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L     T+  +      S  LG+++++        FH +    + + YI  F  F
Sbjct: 17  IYPLLLQGLKWTLLLSLVAAPVSIALGMLIAIGY-----SFHHRVANLVLIAYIDLFRSF 71

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  L L  + Y L F    L              F ++ +AL+   + +  EI R+G+ 
Sbjct: 72  PVVVL-LALIYYGLPFFGITL------------SSFAAVVLALALNNSGYYGEIFRAGIE 118

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP GQ EAA +LG    +    ++LPQA+R+++ PL S  L L K++S+A  V   +L+
Sbjct: 119 SVPHGQREAARSLGFGRSREIAYIVLPQAVRNVLAPLASNTLELFKSTSIASLVSLPELL 178

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                   QT      ++    I+  L   +A ++ RL  + AL  +
Sbjct: 179 RSSRVAQEQTYNPTP-LMAAAVIFFLLLWPLARWVARLE-RQALSRR 223



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 37/94 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+      +  +G L+  G    +++   +   Y+++FR+ P +V++  +
Sbjct: 21  LLQGLKWTLLLSLVAAPVSIALGMLIAIGYSFHHRVANLVLIAYIDLFRSFPVVVLLALI 80

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           Y  +            +   + LNN G       
Sbjct: 81  YYGLPFFGITLSSFAAVVLALALNNSGYYGEIFR 114


>gi|215485687|ref|YP_002328118.1| glutamate/aspartate transport system permease GltJ; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|312965094|ref|ZP_07779331.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 2362-75]
 gi|215263759|emb|CAS08095.1| glutamate/aspartate transport system permease GltJ; membrane
           component of ABC superfamily [Escherichia coli O127:H6
           str. E2348/69]
 gi|312290185|gb|EFR18068.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 2362-75]
          Length = 246

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSILCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|325278186|ref|ZP_08143685.1| amino acid ABC transporter, permease protein [Pseudomonas sp.
           TJI-51]
 gi|324096680|gb|EGB95027.1| amino acid ABC transporter, permease protein [Pseudomonas sp.
           TJI-51]
          Length = 239

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + +    +G+ L L    L+    ++  +A    + + F       L L+ + Y  
Sbjct: 25  VTVSLALACLPIGLPLGLVV-ALAARSRKRLPRAWATTFSTVFRGL-PELLTLLIIYYGC 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +       G  +   F++  IA S   AAF +EI  +    +P+GQ EA  ALG
Sbjct: 83  QIAAQKVLAALGYEGEFLINTFVAAMIAFSLVFAAFSSEIWLAAFKTLPKGQWEACSALG 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+ R     VLLPQ  R  +P L++ +L+LLK++SL   +   DL+      ++ T + +
Sbjct: 143 LSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQTNLAVSVTKEPM 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
               +    YL  + +       +  +
Sbjct: 203 FFYGVACLGYLLFAALSGRVFAYIERR 229



 Score = 39.2 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L G + T  LA + +     +G +V     S  +L       +  VFR +P L+ 
Sbjct: 15  WGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLPELLT 74

Query: 145 IFFLYKS 151
           +  +Y  
Sbjct: 75  LLIIYYG 81


>gi|171318277|ref|ZP_02907438.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171096541|gb|EDT41437.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 248

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 16/208 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF------LIFGLPTLVLIALKYQLHFDKP 249
           LG+  +             T +  P    + F      +  G P L+ + L Y       
Sbjct: 23  LGLFFASLVLGGLLSLVIVTMRVSPHWLPNRFARAYILVFRGSPLLIQMFLVYY------ 76

Query: 250 VLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            LGQF  I  S + P     ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL
Sbjct: 77  GLGQFGVIRESFIWPLLREPYVCAVLSLALCTAGYTAEILRGGLMAVPVGQIEAGYSIGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +     R V+ P A+R  +P  +++ + L+K+++LA  V   ++  V   II QT +  E
Sbjct: 137 SGFALLRSVIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTE 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + +    IYL L+ ++   +  L  +++
Sbjct: 197 VFVCAALIYLGLNFIVVRLLGALEWRLS 224


>gi|91786597|ref|YP_547549.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91695822|gb|ABE42651.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas sp. JS666]
          Length = 229

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 11/240 (4%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               IV     F +   L F    +     +     ++G  L      +       T   
Sbjct: 1   MWAQIVEELPRFFSYYNLIFFAKALGVTFALSAIGCIVGFSLGFVLAAVRLTTRPATRPL 60

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              + +   L   +P LV + L +           F F G       F    I++     
Sbjct: 61  RVAVTVFIELFRRIPFLVTLMLVF-----------FVFQGMHADLSMFNVALISVCLIAT 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAEIVRSGL +V R Q +AA+ L  ++ +  RLV++PQA + I+PP+   ++  +K++
Sbjct: 110 AFIAEIVRSGLESVHRNQWDAAVTLNFSYLQTLRLVIVPQAWKVILPPVFGFFVLFIKDT 169

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +LA  +G  +L   G  + N+   A  +    + +Y  LS  +A F   L  K+A    +
Sbjct: 170 ALASQIGVVELAFAGKAMNNKGFSAALVYGTVLALYFMLSYPLAHFGKYLERKLAPTRNR 229


>gi|70733738|ref|YP_257378.1| glutamine/glutamate ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68348037|gb|AAY95643.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 219

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 13/224 (5%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G+ L    L            I + S     +  +    L R    K       +Y+  F
Sbjct: 5   GLELLLVSLPQLARGAAQTLSISLLSIAFSTLGGVLYGVL-RSLQRKVLDVPLRIYLELF 63

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P LV +   Y L F  P+    +        P F    + LS + A+ + E+VR 
Sbjct: 64  --RAIPVLVWL---YLLFFGFPIFFGLSI-------PSFTCAVLVLSLWGASEVGEVVRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L ++PRGQ EA +++GL+  +    VLLPQA++ + PP  + Y  ++K SSLAV +G  
Sbjct: 112 ALQSLPRGQREAGLSIGLSGAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVV 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ VG  II +T +++ I  +    +  +   ++     L  +
Sbjct: 172 DVIKVGQQIIERTYESVLIYGVLFLFFFFICYPLSAASRVLERR 215



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 32/65 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++   +  +T+ G L G  R    K++    R+Y+E+FR IP LV ++ L
Sbjct: 16  LARGAAQTLSISLLSIAFSTLGGVLYGVLRSLQRKVLDVPLRIYLELFRAIPVLVWLYLL 75

Query: 149 YKSVL 153
           +    
Sbjct: 76  FFGFP 80


>gi|262044439|ref|ZP_06017500.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259038219|gb|EEW39429.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 221

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + + G+ + +    +      ++G+   L  +    +  +
Sbjct: 11  WPHWPELLAGLWVTVQLTVLATIGGLAIGILGAAI------RSGRPGMLSRVWGGYVEII 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                +   + + F  P LG     G         +  +A+     A+  EIVR+G+   
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKMTAGE--------AALLAMMVNLGAYSTEIVRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGL+  +    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLSRTQTFVRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I ++T  + E+ L+   IYL+LSI +   +     K
Sbjct: 177 ANLIQSRTFLSFEVYLVTTGIYLALSIAMRQLLMAAGRK 215



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 38/96 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    +   +L G   T  L     I    IG L  A R     +++ +   YVE+ 
Sbjct: 5   LHFSELWPHWPELLAGLWVTVQLTVLATIGGLAIGILGAAIRSGRPGMLSRVWGGYVEII 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKMTAGEAALLAMMVN 100


>gi|171741001|ref|ZP_02916808.1| hypothetical protein BIFDEN_00063 [Bifidobacterium dentium ATCC
           27678]
 gi|283455610|ref|YP_003360174.1| glutamine transport system permease glnP [Bifidobacterium dentium
           Bd1]
 gi|306823352|ref|ZP_07456727.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309802737|ref|ZP_07696841.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171276615|gb|EDT44276.1| hypothetical protein BIFDEN_00063 [Bifidobacterium dentium ATCC
           27678]
 gi|283102244|gb|ADB09350.1| glnP2 Glutamine transport system permease protein glnP
           [Bifidobacterium dentium Bd1]
 gi|304553059|gb|EFM40971.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308220801|gb|EFO77109.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 218

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 14/224 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               F     +    I VF   L I + L              + +  +YI   L    P
Sbjct: 9   HYAPFFVTGSEMTLFISVFGIALAIAVGLV-CAGVEIARIPVLRQIVRVYIE--LSRNTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +   Y L+F  P L          V        + L     +++AE +R GL  +P
Sbjct: 66  LLVQL---YFLYFGLPKL--------GVVWSAEQCAIVGLGFLGGSYMAEAMRGGLETIP 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             Q E+A  LG    +    V++PQA+ + IP + +  + L+K SS+  A+  AD++ + 
Sbjct: 115 NVQRESAYVLGFNTWQTLSRVVIPQAVSTSIPGVVANVIFLIKESSVVSAIALADVMYMA 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +I       E + + +  YL + + I+LF   L  +   + +
Sbjct: 175 KDLIGMYYSTYESLFMLVVAYLIILLPISLFGTWLERRFDYERR 218



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 42/80 (52%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ +T  + YA   + G   T +++  G+  A  +G +     ++   ++  I RVY+E+
Sbjct: 1   MLDWTFITHYAPFFVTGSEMTLFISVFGIALAIAVGLVCAGVEIARIPVLRQIVRVYIEL 60

Query: 136 FRNIPPLVVIFFLYKSVLSV 155
            RN P LV ++FLY  +  +
Sbjct: 61  SRNTPLLVQLYFLYFGLPKL 80


>gi|158424304|ref|YP_001525596.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331193|dbj|BAF88678.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 231

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 15/242 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG--IVLSLFATRLSRHFHEKTG 216
               IV  +  F     L F      T   +     +LG  I L L  TR++R       
Sbjct: 1   MWSQIVEEWPRFATYYNLIFIAKAAGTTLALSALGCILGSLIGLGLAVTRVTRARWLLPL 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + + L++   F       LV + L +           F F       P F+   ++++  
Sbjct: 61  RLVALVFTEVFRRVPF--LVTLMLCF-----------FAFQATGYDIPLFVVAAVSVTMI 107

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             AF+ EI+R G  +V R Q EAA  +  +     RLV+LPQA R ++PP    ++  +K
Sbjct: 108 AGAFLGEIIRGGFNSVHRNQWEAAETMNFSLIDTIRLVVLPQAWRIVLPPAFGFFVMFIK 167

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++LA  +G  +L  VG  + N+   A     + + +Y  +S  ++     L A++A   
Sbjct: 168 DTALASQIGVIELTYVGKVLNNKGFSAALSFGVILIVYFLISYPLSRLGAHLEARLASSR 227

Query: 397 KK 398
            +
Sbjct: 228 HR 229


>gi|86357517|ref|YP_469409.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
 gi|86281619|gb|ABC90682.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 381

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 99/228 (43%), Gaps = 20/228 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +      SF LGI+L+L      R       +   +++I       L T+
Sbjct: 169 WGGLLVTLVLSFVGIAVSFPLGIILAL-----GRRSQMPVIRTFCVVFIEVVRGVPLITV 223

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A           +    F+       + +   I +S + +A++AE++R GL A+P+G
Sbjct: 224 LFMA----------SVMLPLFLPAGWTVDKLLRAVIGVSIFASAYMAEVIRGGLQAIPKG 273

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A +LGL + +  RLV++PQA++ +IP + + ++ + K++SL   +   DL+ +   
Sbjct: 274 QFEGADSLGLGYWQKMRLVIMPQAIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGIVRL 333

Query: 356 -----IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                        +  ++   F +      ++ +   +   +    K+
Sbjct: 334 NFVDPNWATAVTPLTGLIFAGFAFWLFCFGMSRYSAFIERHLDTGHKR 381



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 11/141 (7%)

Query: 21  DMRVHNISVQIILALLLT-VIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPY 79
           D R     V I+  LLL  ++         N +    +   I F     GF ++    P 
Sbjct: 109 DERWRPTLVGILFVLLLVPMLIPSAPRKGVNALLLFGVLPIISFFLLYGGFGLEIVETP- 167

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
                    +  G + T  L+F G+  +  +G ++  GR S   ++   C V++EV R +
Sbjct: 168 ---------LWGGLLVTLVLSFVGIAVSFPLGIILALGRRSQMPVIRTFCVVFIEVVRGV 218

Query: 140 PPLVVIFFLYKSVLSVLPIPD 160
           P + V+F     +   LP   
Sbjct: 219 PLITVLFMASVMLPLFLPAGW 239


>gi|227112028|ref|ZP_03825684.1| arginine transporter permease subunit ArtM [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|227329262|ref|ZP_03833286.1| arginine transporter permease subunit ArtM [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 222

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 3/174 (1%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L  G P LV I L Y        + Q  ++      P ++   +AL+  +AA+  ++
Sbjct: 51  YITLFTGTPLLVQIFLIYYGPGQFTSIQQIPWLWNLLSQP-WLCAMVALALNSAAYTTQL 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
               + A+P GQ ++  ALG+  ++    +LLP A +  +   +++ + + K++SLA  +
Sbjct: 110 FYGAVKAIPAGQWQSCAALGMDQKQTL-RILLPFAFKRALSSYSNEVVLVFKSTSLAYTI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++     +  +T   + +      IYL ++ ++ L M  +  +    E++
Sbjct: 169 TLMEVMGYSQLMYGRTYDVM-VFGAAGIIYLCVNGLLTLLMRWVERRSLAFERR 221


>gi|117620598|ref|YP_858703.1| amino-acid ABC transporter permease protein YckJ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117562005|gb|ABK38953.1| probable amino-acid ABC transporter permease protein YckJ
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 222

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 10/188 (5%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R F       L +LYIS F   G P LV + L   L++  P L              F
Sbjct: 43  IVRVFRVPVIHWLAMLYISFF--RGTPLLVQLFL---LYYGLPQLFPIF-----VGMDAF 92

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +  + L+ + AA++AE +R+ +I + + QMEAA+++G++  +A + ++LPQA R   P 
Sbjct: 93  TAAIVGLTLHFAAYMAESIRASIIGIHKSQMEAALSIGMSRYQAMQRIILPQAARIATPS 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L + +++++K++SLA  +G A+++       + + +  E  +    +Y  + I      +
Sbjct: 153 LMNYFIDMIKSTSLAFTLGVAEIMGKAQMEASSSFKFFESFMAVALVYWVVVIFFTRLQH 212

Query: 387 RLNAKIAL 394
            L  ++  
Sbjct: 213 LLEVRLNR 220



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +A  G + A ++   +   R+    ++ W+  +Y+  FR  P LV +F L
Sbjct: 16  LLKYLGTTMEMALWGFVLALVLSLALAIVRVFRVPVIHWLAMLYISFFRGTPLLVQLFLL 75

Query: 149 YKSVLSVLP 157
           Y  +  + P
Sbjct: 76  YYGLPQLFP 84


>gi|319404433|emb|CBI78036.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella rochalimae ATCC BAA-1498]
          Length = 250

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T   +    V +  +G+++ +  T           +A+   ++   ++  +P L
Sbjct: 34  LDGFKNTAILSIYSLVLAVFMGVIIGMIRTLPKTSIINNFLRAVGTFWVE--IMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +   P  + +  AL  +T+A IAE VRSG+ ++P G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAMNFPPILLIICALGFFTSARIAEQVRSGIESIPSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G    ++ R ++LP+A+R+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFNTYQSYRYIILPRAIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  L+   +Y+ +S+ I + M  +   I +
Sbjct: 204 TIEEVSHVYENYLLVTLLYIVISLFIFILMTIIERAIRI 242



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVF 136
             +Y   +L GF NT  L+   ++ A  +G ++G  R        N  +  +   +VE+ 
Sbjct: 26  SHTYLDTLLDGFKNTAILSIYSLVLAVFMGVIIGMIRTLPKTSIINNFLRAVGTFWVEIM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           RNIP LV +F  Y  V  + P   +   +
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPAMNFPPI 114


>gi|121606345|ref|YP_983674.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120595314|gb|ABM38753.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 222

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 8/208 (3%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGLPTLVLIALKYQLHFDK 248
           F+FS  L ++ +L    L             +L I  T  + G+ ++ L+ +        
Sbjct: 22  FLFSVQLTVIATLGGIVLGTLLALMRLSGKQVLVIPATIYVNGMRSIPLVMVILWFFLLV 81

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           P +               +S  I    + AA+ +EIVR+G+ ++ RGQ+ A  ALG+T+ 
Sbjct: 82  PTIIGRPIGAE-------LSATITFVAFEAAYFSEIVRAGIQSISRGQVNAGRALGMTYA 134

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  +L++LPQA R+++P L +Q + L +++SL  A+G  DL+    T     G+  E  L
Sbjct: 135 QNMKLIILPQAFRNMVPVLLTQTIILFQDTSLVYAIGAYDLLKGFTTAGKIYGRPEEAYL 194

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +Y  L   ++  + RLN++IA+  
Sbjct: 195 LAAVVYFVLCYSLSYMVKRLNSRIAIIR 222



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 72/191 (37%), Gaps = 8/191 (4%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ +  L     +   ++GTL+   RLS  +++     +YV   R+IP ++VI + +  
Sbjct: 21  GFLFSVQLTVIATLGGIVLGTLLALMRLSGKQVLVIPATIYVNGMRSIPLVMVILWFFLL 80

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-- 209
           V +++  P  + +     F+      F  +       I       G  L +   +  +  
Sbjct: 81  VPTIIGRPIGAELSATITFVAFEAAYFSEIVRAGIQSISRGQVNAGRALGMTYAQNMKLI 140

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
              +     +P+L   T ++F   +LV     Y L      L  F   G     PE   L
Sbjct: 141 ILPQAFRNMVPVLLTQTIILFQDTSLVYAIGAYDL------LKGFTTAGKIYGRPEEAYL 194

Query: 270 YIALSCYTAAF 280
             A+  +   +
Sbjct: 195 LAAVVYFVLCY 205


>gi|16119459|ref|NP_396165.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15161997|gb|AAK90606.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 216

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 13/222 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L F    ++    +   +   G+ L L    ++R       + +   ++   LI 
Sbjct: 4   FSFSDLLFLATALEWTFLMAAIALAFGVPLGLAL-AIARTSGSTVLRVIASAFVE--LIQ 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L L+   Y   F  PVL   +        P  +++  A + YTA F+ +I R G+ 
Sbjct: 61  GIPLLGLLMFFY---FGIPVLAGKDV-------PTVVAVGAAYTIYTAVFLGDIWRGGIQ 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV + Q EA   LGL+  +    ++ PQA R  +P      + L+KN+SLA  VG  +L 
Sbjct: 111 AVRQAQWEAGACLGLSWLQQFVHIIGPQAFRIALPATVGFLVQLIKNTSLASVVGLVELA 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G  I   T Q + +  +   IY ++   +  +   L A++
Sbjct: 171 RAGQMISAGTFQPLLVYTLVAAIYFTICFPLTTWSRTLEARL 212



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 28/65 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +      TF +A   +     +G  +   R S + ++  I   +VE+ + IP L ++ F 
Sbjct: 12  LATALEWTFLMAAIALAFGVPLGLALAIARTSGSTVLRVIASAFVELIQGIPLLGLLMFF 71

Query: 149 YKSVL 153
           Y  + 
Sbjct: 72  YFGIP 76


>gi|307329671|ref|ZP_07608829.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306884729|gb|EFN15757.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 289

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 104/254 (40%), Gaps = 26/254 (10%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L ++ ++   ++          +      +    L+    T+       V S  LG VL
Sbjct: 32  LLALLGWVVYLLIHTGQFAYRKWMPFEYKGIQELLLNGLAGTLKAFGIAAVLSLALGGVL 91

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +       R    +  + +  L +  F                     PVL    F+  +
Sbjct: 92  A-----AGRLSEHRPVRWVATLLVEFFR------------------AMPVLVMIFFVFVA 128

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +L   L+ Y  + +AE+ R+G+ +V RGQ EAA +LGL   +    VL+PQ +
Sbjct: 129 LKVQPLPALVTGLTLYNGSVLAEVFRAGVNSVDRGQREAAYSLGLRKTQVMTSVLVPQGV 188

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSL 377
           R+++P + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ +
Sbjct: 189 RAMLPAIISQLVVALKDTSLGFLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGM 248

Query: 378 SIMIALFMNRLNAK 391
            ++++ F N +  +
Sbjct: 249 CMLLSWFANWVAKR 262



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 18/131 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  +    +    +L  +  W V                  L     F   +  +P+  
Sbjct: 17  TRRRHRIYALAGTAVLLALLGWVVY----------------LLIHTGQFAYRK-WMPFEY 59

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T        + +  +G ++ AGRLS ++ V W+  + VE FR +P 
Sbjct: 60  KG-IQELLLNGLAGTLKAFGIAAVLSLALGGVLAAGRLSEHRPVRWVATLLVEFFRAMPV 118

Query: 142 LVVIFFLYKSV 152
           LV+IFF++ ++
Sbjct: 119 LVMIFFVFVAL 129


>gi|288961243|ref|YP_003451582.1| octopine/nopaline transport system permease protein [Azospirillum
           sp. B510]
 gi|288913551|dbj|BAI75038.1| octopine/nopaline transport system permease protein [Azospirillum
           sp. B510]
          Length = 249

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 6/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    +T+  +    V   VLG +L+    R++  F  +T        I+T L  
Sbjct: 27  WGLPLLCAALMTVALSVSGLVVGAVLGALLAYA--RIAGGFIART----AADAITTVLRG 80

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV+    +        +G     GG    P F++  +AL   +AA+ AE+ R    
Sbjct: 81  VPDLLVIYLFYFGGSQILSWIGNAAGYGGFIGLPVFLTGVLALGVVSAAYQAEVFRGAFN 140

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +PRGQ+E+A A G+      R VL PQ  R  +P + + +  +LK+S+L   +G  +L+
Sbjct: 141 VIPRGQIESARAAGMGPLLMFRRVLAPQVFRHALPGMGNVWQLILKDSALISVIGLVELL 200

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T +        + +YL+++ +          +     ++
Sbjct: 201 RAAQVGAGSTREPFLFYSAALLLYLAITSLSGQAFRWAEIRSLRPFRR 248


>gi|254450542|ref|ZP_05063979.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Octadecabacter antarcticus 238]
 gi|198264948|gb|EDY89218.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Octadecabacter antarcticus 238]
          Length = 252

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 1/234 (0%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT 215
            PI   +      + +               A++F+ S VL ++  L     ++    + 
Sbjct: 9   RPIFTLNHEKGHAVDVLTGWWDDFFWGSVVVAQVFLASLVLMVIFGLLGAA-AKLSSNRI 67

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            + +   Y   F       ++L+           +   FN        P F +  IA++ 
Sbjct: 68  FQKIANGYTIVFRGTPEILVILLLYFGSAIALTAIAQVFNPEIKFLDVPPFWAGTIAIAL 127

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              ++  E  R   + V  G +EAA ALG+   +    V + +  R  +P   +  L+L+
Sbjct: 128 IVGSYATETFRGAFLGVKPGSIEAAQALGMNGFQVFFYVRVAEMWRLALPAFGNHMLSLI 187

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           K+++L   +G  + + V    I  TG    + ++   IYL  S +I L +  L 
Sbjct: 188 KDTALISIIGLNETLFVAKQAIATTGAPFIMYIMVGVIYLGFSTVITLTVMTLE 241


>gi|6685718|sp|P72295|OCCQ_RHIME RecName: Full=Octopine transport system permease protein occQ
 gi|1519472|gb|AAB07518.1| OccQ [Sinorhizobium meliloti]
          Length = 237

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 89/228 (39%), Gaps = 6/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L    +T+   +  F    V G + +  +   S                 T L  
Sbjct: 14  WGSDMLRATGMTVAVASSAFTIGLVFGCLGATASFSKSLALQAAASSYT------TALRG 67

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV+    +        +G      G   +P F++  +A+   +AA+  +++R  ++
Sbjct: 68  IPDLLVIYLFYFGSSSLISGVGSLFGSDGFVSAPAFLTGALAIGLVSAAYQTQVLRGAVL 127

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +G++EA  A G+ +    R ++LPQA R  +P + + +  +LK S+L   +G  +L+
Sbjct: 128 ALNKGEIEAGRAYGMGYFLLFRRIILPQAARHALPGVGNVWQLVLKESALISVIGLVELM 187

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T Q     L    +YL ++ +         A+     ++
Sbjct: 188 RQAQVGSGSTRQPFSFYLTAAALYLLITFISGQAFRLAEARSMRGLRR 235


>gi|227327249|ref|ZP_03831273.1| histidine ABC transporter permease protein [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 229

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 72/175 (41%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T LI G+P LVL+ L +            +            +  I L     A+  E
Sbjct: 51  CYTTLIRGIPDLVLMLLIFYGLQIVLNGVTESIGLDQIDIDPLTAGIITLGFIYGAYFTE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + +  +LK ++L   
Sbjct: 111 TFRGAYLAVPRGQIEAAVAFGFSPMKVFRRILFPSMMRFALPGIGNNWQVILKATALVSL 170

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  D++         T +     L+   +YL  + +    +  L    +   KK
Sbjct: 171 LGLNDVIKATQLAGKGTHEPFYFALVAGAMYLIFTTISNGVLWWLERHYSQGVKK 225


>gi|227511852|ref|ZP_03941901.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227084942|gb|EEI20254.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
          Length = 253

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 106/230 (46%), Gaps = 8/230 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLI 229
           ++   +      + +   + ++  V+ +++      +     EK  K L  ++ +    +
Sbjct: 1   MDFHFMIDSLPKLISVIPMTIYISVVSVIVGFALAAIIAIAREKKIKVLSQIFAVLVSFV 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE----FMSLYIALSCYTAAFIAEIV 285
            G P LV +   Y +++  P    +    G  V P      +    A S   AA ++E +
Sbjct: 61  RGTPILVQL---YVIYYGLPQFLYYLQNQGVNVKPGSLPHLVIAISAYSLNAAANLSETI 117

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RS   +V + Q +AA+++G+T   + R +++PQ + ++IP  ++ +L+L+K+++L   +G
Sbjct: 118 RSAYHSVDKDQYQAALSVGMTPSLSMRRIVIPQLIPNLIPNFSNFFLDLIKDTALVYNIG 177

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             ++++    I +   + +E  L  + +YL +  +    ++     +  +
Sbjct: 178 IIEIMAKSNIIASFGFKYLETYLDALLLYLVICFVFGKILSLTETYVTRR 227


>gi|148259697|ref|YP_001233824.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidiphilium cryptum JF-5]
 gi|146401378|gb|ABQ29905.1| amino acid ABC transporter membrane protein, PAAT family
           [Acidiphilium cryptum JF-5]
          Length = 250

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 66/250 (26%), Positives = 120/250 (48%), Gaps = 16/250 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++  +           +          +    L      +   A     +FVLG+VL L 
Sbjct: 6   ILAIVLALAAEFAKWREIGRTFFEPRLIEFTILHGLANALLNTALYTAGAFVLGLVLGLV 65

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              + R       + L  +YI  F   GLP+LV+        F    L    F G +   
Sbjct: 66  LALM-RLSPVAPYRWLATVYIEFF--RGLPSLVV--------FIAFSLLPLAFSGLTIPW 114

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             + ++++AL    +A++AE +R+G+ AVP+GQ+EAA +LG++  +A R ++L QA+R +
Sbjct: 115 SPYGTVWVALGVVGSAYMAETMRAGIQAVPKGQVEAARSLGMSSAQAMRKIVLMQALRLM 174

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +PPLT++ + L+K+SSL   VG +    DL   G +  N T   I  +++    YL +++
Sbjct: 175 VPPLTNELIMLIKDSSLVFVVGLSAGQFDLTEFGRSTAN-TNVNITPLVVAGLGYLLITL 233

Query: 380 MIALFMNRLN 389
            +++ + R+ 
Sbjct: 234 PLSMLVRRME 243



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +    +NT        +   ++G ++   RLS      W+  VY+E FR +P LV
Sbjct: 36  TILHGLANALLNTALYTAGAFVLGLVLGLVLALMRLSPVAPYRWLATVYIEFFRGLPSLV 95

Query: 144 VIFFLYKSVLSVLPIPDHSIVL 165
           V        L+   +       
Sbjct: 96  VFIAFSLLPLAFSGLTIPWSPY 117


>gi|332041345|gb|EGI77707.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 231

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 15/191 (7%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
               R       +  + +P L    F  F  P L+  AL+  L+                
Sbjct: 51  WAPLRAFAWLCVEVQRNIPPLAHLLFWYFAAPELLPEALRDWLY---------------G 95

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
            + E ++  +AL+ Y AAF+ E +RSG+ +VP  Q EA  ALGL      R ++LPQA+R
Sbjct: 96  HNFEAIAAVVALTLYAAAFMGEDLRSGIRSVPAVQFEAGRALGLGFLPTMRFIILPQALR 155

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              PPL SQ LNL KNSSLA  +G A+L+     +  +T ++ E        YL++S+ I
Sbjct: 156 IATPPLLSQTLNLWKNSSLATVIGTAELMYAAAKVETETFRSFEAFAFATVCYLTVSLAI 215

Query: 382 ALFMNRLNAKI 392
                    + 
Sbjct: 216 GALAAWFARRY 226



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 33/84 (39%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   +L G   +  L    ++ A  +   +   RLS    +     + VEV RNIPP
Sbjct: 11  AGPYHETLLAGLAMSLRLLVISLMLALPLAAALALLRLSPWAPLRAFAWLCVEVQRNIPP 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVL 165
           L  + F Y +   +LP      + 
Sbjct: 71  LAHLLFWYFAAPELLPEALRDWLY 94


>gi|317053173|ref|YP_004119527.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953500|gb|ADU72971.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 229

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 94/227 (41%), Gaps = 11/227 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             +   L      +     +  F  ++G +                     ++++  F+ 
Sbjct: 12  LFSYYNLLLLLQGLGITLALSAFGCLIGFLAGFVLAVTINTKAALLSPLRGVVHVYFFIF 71

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P LV + L +           F           F    I++    AA++ EI+RSGL
Sbjct: 72  RRIPFLVTLFLVF-----------FISQYSGLRFSTFTVALISVCIIAAAYLGEIIRSGL 120

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +V   Q EAA+ L  ++ +  R V++PQ++  +IPP  S ++  +K+++LA  +G  +L
Sbjct: 121 ESVHHNQWEAAVTLNFSYLQTLRYVIIPQSLTVVIPPTFSFFVMYIKDTTLASQIGVMEL 180

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            S    + ++   A  +  + + +Y  +S  ++    RL  KIA   
Sbjct: 181 TSASKILSDKGYSATLVYAVVLMLYFIVSYPLSRLGKRLERKIATAR 227


>gi|221197901|ref|ZP_03570947.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221204541|ref|ZP_03577558.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221175398|gb|EEE07828.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221181833|gb|EEE14234.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 250

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 9/236 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLY 223
           + F +  +N          D        S VL I  ++ +  L          A  P   
Sbjct: 1   MDFSLLFSNLPYLLVGAFPDGPLGGAALSLVLAIASAVASAALGVGLGVAMALARGPARA 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +    I     + ++ L +  +F  P+L         T  P   S+  AL+    A++A 
Sbjct: 61  LLLAFIGFFRAIPVLMLIFWTYFLMPIL-------LHTDVPGLASVVCALALVGGAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++SLA  
Sbjct: 114 AVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG  +L  V   + N+       I L    IYL +   +      L ++   +  +
Sbjct: 174 VGVPELSFVATQVNNRLMVYPAPIFLFVAAIYLIICTSLDGAARWLLSRGPRERGR 229


>gi|27379559|ref|NP_771088.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27352711|dbj|BAC49713.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 506

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 40/320 (12%)

Query: 84  SYATAILVGFVNTFWLAF-SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           ++    L G   + W+ F    +  ++I  L+G G  +  + +A     +V         
Sbjct: 220 TWLRDQLQGTGQSVWVDFAITAVIVSLIAFLLGGGVRAGWRALASSIATFV--------- 270

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
            +   +    L    +P     L  G+ +              +    V S  +GI L+L
Sbjct: 271 AIAIVIKLMGLDHGGLPVVETSLWGGLLVTLV----------VSVTGIVTSLPIGIALAL 320

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R       +   + +I  +    L T VL    Y L           F+ G+  
Sbjct: 321 -----GRRSTIPLIRIFSIAFIEFWRGVPLIT-VLFFATYMLPL---------FLPGNFT 365

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               +   I ++ +T A+ AE VR GL A+PRGQ EAA ALGL+  K T L++LPQA+R 
Sbjct: 366 VDGLVRALIGIALFTGAYQAENVRGGLAAIPRGQGEAAAALGLSWWKTTSLIVLPQALRH 425

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ-----TGQAIEIILIWMFIYLSL 377
           +IP L + +++L K++SL   V   DL+       +         A         IY   
Sbjct: 426 VIPNLVNSFISLFKDTSLVSIVALFDLLGSLRASFSDPKWSTPSTAFTGFAFAGIIYFLF 485

Query: 378 SIMIALFMNRLNAKIALKEK 397
              ++ +   +  ++    +
Sbjct: 486 CFGMSRYSLFVEHRLNAHRR 505


>gi|16128637|ref|NP_415187.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|26246628|ref|NP_752668.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli CFT073]
 gi|89107523|ref|AP_001303.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. W3110]
 gi|110640876|ref|YP_668604.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli 536]
 gi|117622863|ref|YP_851776.1| glutamate and aspartate transporter subunit [Escherichia coli APEC
           O1]
 gi|157155111|ref|YP_001461824.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E24377A]
 gi|157160142|ref|YP_001457460.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli HS]
 gi|170020989|ref|YP_001725943.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|170080233|ref|YP_001729553.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170080334|ref|YP_001729654.1| glutamate/aspartate ABC transporter membrane protein [Escherichia
           coli str. K-12 substr. DH10B]
 gi|188496270|ref|ZP_03003540.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli 53638]
 gi|191168688|ref|ZP_03030468.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli B7A]
 gi|191173965|ref|ZP_03035483.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli F11]
 gi|194439894|ref|ZP_03071957.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli 101-1]
 gi|209917915|ref|YP_002291999.1| glutamate/aspartate ABC transporter permease [Escherichia coli
           SE11]
 gi|218549770|ref|YP_002383561.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia fergusonii ATCC 35469]
 gi|218557585|ref|YP_002390498.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli S88]
 gi|218688470|ref|YP_002396682.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli ED1a]
 gi|218703988|ref|YP_002411507.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli UMN026]
 gi|227884373|ref|ZP_04002178.1| GltJ subunit of glutamate ABC superfamily ATP binding cassette
           transporter [Escherichia coli 83972]
 gi|237707379|ref|ZP_04537860.1| glutamate/aspartate transporter gltJ [Escherichia sp. 3_2_53FAA]
 gi|238899931|ref|YP_002925727.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|253774362|ref|YP_003037193.1| polar amino acid ABC transporter inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254160733|ref|YP_003043841.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|256023734|ref|ZP_05437599.1| glutamate and aspartate transporter subunit [Escherichia sp.
           4_1_40B]
 gi|293403916|ref|ZP_06647910.1| glutamate Aspartate transport system permease gltJ [Escherichia
           coli FVEC1412]
 gi|293408780|ref|ZP_06652619.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B354]
 gi|298379691|ref|ZP_06989296.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli FVEC1302]
 gi|300907832|ref|ZP_07125448.1| putative ATP synthase F0, A subunit [Escherichia coli MS 84-1]
 gi|300920530|ref|ZP_07136956.1| putative ATP synthase F0, A subunit [Escherichia coli MS 115-1]
 gi|300931589|ref|ZP_07146901.1| putative ATP synthase F0, A subunit [Escherichia coli MS 187-1]
 gi|300989987|ref|ZP_07179063.1| putative ATP synthase F0, A subunit [Escherichia coli MS 45-1]
 gi|301025219|ref|ZP_07188788.1| putative ATP synthase F0, A subunit [Escherichia coli MS 69-1]
 gi|301028863|ref|ZP_07192038.1| putative ATP synthase F0, A subunit [Escherichia coli MS 196-1]
 gi|301049844|ref|ZP_07196783.1| putative ATP synthase F0, A subunit [Escherichia coli MS 185-1]
 gi|301302136|ref|ZP_07208269.1| putative ATP synthase F0, A subunit [Escherichia coli MS 124-1]
 gi|301643930|ref|ZP_07243957.1| putative ATP synthase F0, A subunit [Escherichia coli MS 146-1]
 gi|306812921|ref|ZP_07447114.1| glutamate and aspartate transporter subunit [Escherichia coli
           NC101]
 gi|307137271|ref|ZP_07496627.1| glutamate and aspartate transporter subunit [Escherichia coli H736]
 gi|312970729|ref|ZP_07784910.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1827-70]
 gi|331641158|ref|ZP_08342293.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H736]
 gi|331645811|ref|ZP_08346914.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli M605]
 gi|331651667|ref|ZP_08352686.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli M718]
 gi|331656674|ref|ZP_08357636.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA206]
 gi|331662020|ref|ZP_08362943.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA143]
 gi|331672186|ref|ZP_08372978.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA280]
 gi|331682071|ref|ZP_08382695.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H299]
 gi|84028709|sp|P0AER4|GLTJ_ECOL6 RecName: Full=Glutamate/aspartate transport system permease protein
           gltJ
 gi|84028710|sp|P0AER3|GLTJ_ECOLI RecName: Full=Glutamate/aspartate transport system permease protein
           gltJ
 gi|26107027|gb|AAN79211.1|AE016757_115 Glutamate/aspartate transport system permease protein gltJ
           [Escherichia coli CFT073]
 gi|624630|gb|AAA60980.1| GltJ [Escherichia coli]
 gi|1651273|dbj|BAA35306.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K12 substr. W3110]
 gi|1778572|gb|AAB40855.1| glutamate/aspartate transport system permease protein [Escherichia
           coli]
 gi|1786874|gb|AAC73755.1| glutamate and aspartate transporter subunit [Escherichia coli str.
           K-12 substr. MG1655]
 gi|110342468|gb|ABG68705.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli 536]
 gi|115511987|gb|ABJ00062.1| glutamate and aspartate transporter subunit [Escherichia coli APEC
           O1]
 gi|157065822|gb|ABV05077.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli HS]
 gi|157077141|gb|ABV16849.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli E24377A]
 gi|169755917|gb|ACA78616.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli ATCC 8739]
 gi|169888068|gb|ACB01775.1| glutamate and aspartate transporter subunit; membrane component of
           ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|169888169|gb|ACB01876.1| glutamate and aspartate transporter subunit; membrane component of
           ABC superfamily [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188491469|gb|EDU66572.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli 53638]
 gi|190901280|gb|EDV61049.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli B7A]
 gi|190905741|gb|EDV65362.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli F11]
 gi|194421188|gb|EDX37212.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli 101-1]
 gi|209911174|dbj|BAG76248.1| glutamate/aspartate ABC transporter permease component [Escherichia
           coli SE11]
 gi|218357311|emb|CAQ89946.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia fergusonii ATCC 35469]
 gi|218364354|emb|CAR02029.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli S88]
 gi|218426034|emb|CAR06851.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli ED1a]
 gi|218431085|emb|CAR11961.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli UMN026]
 gi|222032407|emb|CAP75146.1| glutamate/aspartate transport system permease protein [Escherichia
           coli LF82]
 gi|226898589|gb|EEH84848.1| glutamate/aspartate transporter gltJ [Escherichia sp. 3_2_53FAA]
 gi|227838459|gb|EEJ48925.1| GltJ subunit of glutamate ABC superfamily ATP binding cassette
           transporter [Escherichia coli 83972]
 gi|238861327|gb|ACR63325.1| glutamate and aspartate transporter subunit [Escherichia coli
           BW2952]
 gi|242376427|emb|CAQ31129.1| gltJ, subunit of GltIJKL glutamate ABC transporter [Escherichia
           coli BL21(DE3)]
 gi|253325406|gb|ACT30008.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253972634|gb|ACT38305.1| glutamate and aspartate transporter subunit [Escherichia coli B
           str. REL606]
 gi|253976828|gb|ACT42498.1| glutamate and aspartate transporter subunit [Escherichia coli
           BL21(DE3)]
 gi|260450179|gb|ACX40601.1| polar amino acid ABC transporter, inner membrane subunit
           [Escherichia coli DH1]
 gi|281177802|dbj|BAI54132.1| glutamate/aspartate ABC transporter permease component [Escherichia
           coli SE15]
 gi|284920454|emb|CBG33515.1| glutamate/aspartate ABC transporter, permease protein [Escherichia
           coli 042]
 gi|291428502|gb|EFF01527.1| glutamate Aspartate transport system permease gltJ [Escherichia
           coli FVEC1412]
 gi|291471958|gb|EFF14441.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli B354]
 gi|294491275|gb|ADE90031.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli IHE3034]
 gi|298279389|gb|EFI20897.1| glutamate/aspartate transport system permease gltJ [Escherichia
           coli FVEC1302]
 gi|299878151|gb|EFI86362.1| putative ATP synthase F0, A subunit [Escherichia coli MS 196-1]
 gi|300298396|gb|EFJ54781.1| putative ATP synthase F0, A subunit [Escherichia coli MS 185-1]
 gi|300396148|gb|EFJ79686.1| putative ATP synthase F0, A subunit [Escherichia coli MS 69-1]
 gi|300400464|gb|EFJ84002.1| putative ATP synthase F0, A subunit [Escherichia coli MS 84-1]
 gi|300407262|gb|EFJ90800.1| putative ATP synthase F0, A subunit [Escherichia coli MS 45-1]
 gi|300412469|gb|EFJ95779.1| putative ATP synthase F0, A subunit [Escherichia coli MS 115-1]
 gi|300460613|gb|EFK24106.1| putative ATP synthase F0, A subunit [Escherichia coli MS 187-1]
 gi|300842688|gb|EFK70448.1| putative ATP synthase F0, A subunit [Escherichia coli MS 124-1]
 gi|301077700|gb|EFK92506.1| putative ATP synthase F0, A subunit [Escherichia coli MS 146-1]
 gi|305853684|gb|EFM54123.1| glutamate and aspartate transporter subunit [Escherichia coli
           NC101]
 gi|307552517|gb|ADN45292.1| glutamate/aspartate transport system permease [Escherichia coli ABU
           83972]
 gi|309700893|emb|CBJ00190.1| glutamate/aspartate ABC transporter, permease protein [Escherichia
           coli ETEC H10407]
 gi|310337378|gb|EFQ02516.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 1827-70]
 gi|312945194|gb|ADR26021.1| glutamate and aspartate transporter subunit [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315135320|dbj|BAJ42479.1| glutamate Aspartate transport system permease [Escherichia coli
           DH1]
 gi|315255040|gb|EFU35008.1| putative ATP synthase F0, A subunit [Escherichia coli MS 85-1]
 gi|315616424|gb|EFU97041.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli 3431]
 gi|320194171|gb|EFW68803.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli WV_060327]
 gi|323191286|gb|EFZ76550.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli RN587/1]
 gi|323938416|gb|EGB34670.1| inner membrane transport system [Escherichia coli E1520]
 gi|323943069|gb|EGB39228.1| inner membrane transport system [Escherichia coli E482]
 gi|323952775|gb|EGB48643.1| inner membrane transport system [Escherichia coli H252]
 gi|323963222|gb|EGB58790.1| inner membrane transport system [Escherichia coli H489]
 gi|323967601|gb|EGB63017.1| inner membrane transport system [Escherichia coli M863]
 gi|323972109|gb|EGB67323.1| inner membrane transport system [Escherichia coli TA007]
 gi|323976363|gb|EGB71453.1| inner membrane transport system [Escherichia coli TW10509]
 gi|324114775|gb|EGC08743.1| inner membrane transport system [Escherichia fergusonii B253]
 gi|325498167|gb|EGC96026.1| glutamate and aspartate transporter subunit [Escherichia fergusonii
           ECD227]
 gi|327254339|gb|EGE65961.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Escherichia
           coli STEC_7v]
 gi|331037956|gb|EGI10176.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H736]
 gi|331044563|gb|EGI16690.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli M605]
 gi|331049945|gb|EGI22003.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli M718]
 gi|331054922|gb|EGI26931.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA206]
 gi|331060442|gb|EGI32406.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA143]
 gi|331070653|gb|EGI42016.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli TA280]
 gi|331080750|gb|EGI51924.1| glutamate/aspartate transport system permease protein GltJ
           [Escherichia coli H299]
          Length = 246

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|288959840|ref|YP_003450180.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
 gi|288912148|dbj|BAI73636.1| general L-amino acid transport system permease protein
           [Azospirillum sp. B510]
          Length = 357

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 14/219 (6%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +  +  + V   V    L++    L+R       + L +L+I            LI
Sbjct: 150 RWSGLPVSLLLAVVGLVGAFPLAVLL-ALARRSAMGGVRTLAVLFIEVTRGVP-----LI 203

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A+ Y      P++     +       + +   IA+  + +A++AEI+R+GL ++P GQ E
Sbjct: 204 AVLYVATLLLPLM-----LPAGAAIDKLLRAQIAIILFVSAYLAEIIRAGLQSIPAGQYE 258

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII- 357
           AA ALGL + ++ RLV+LPQA+R++IP + +  + L ++++L + +G  DL++   T   
Sbjct: 259 AAQALGLGYWQSMRLVILPQALRTVIPSIVTLAIGLFQDTTLIIVIGLFDLLNTARTAAK 318

Query: 358 --NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                G   E       IYL++ +  + +   L  ++  
Sbjct: 319 DPAWLGFYDEAFGFVALIYLTVCVAASRYSLWLERRLQR 357



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   +  LA  G++ A  +  L+   R SA   V  +  +++EV R +P + V++   
Sbjct: 151 WSGLPVSLLLAVVGLVGAFPLAVLLALARRSAMGGVRTLAVLFIEVTRGVPLIAVLYVAT 210

Query: 150 KSVLSVLPIPDHSIVL 165
             +  +LP       L
Sbjct: 211 LLLPLMLPAGAAIDKL 226


>gi|260426627|ref|ZP_05780606.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Citreicella sp. SE45]
 gi|260421119|gb|EEX14370.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Citreicella sp. SE45]
          Length = 438

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 19/304 (6%)

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           ++ F  +   T+ G +  A        +      Y+    ++   +V+  LY  VL+   
Sbjct: 150 FILFWLIWGGTVWGPICVALGFVIGWAIIRYASPYIGALGSVILAIVVPLLYWFVLAGPL 209

Query: 158 IPDHSIVLPFGMFL-NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
               + +LP G+    ++ +    L M         S  LGIVL+L             G
Sbjct: 210 DDLLASILPIGLEQVQSKQMGGFMLAMIIGISGIALSLPLGIVLAL-------------G 256

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +   L  I+   +  +  +  + L   L     +L  F   G  T     + + I ++ +
Sbjct: 257 RQSDLFLINKCSVIFIEVIRGVPLIVWLFTASLLLNYFLPPG--TNFDLMLRVIIMVTLF 314

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A+IAE+VR GL A+P+GQ EAA ALGL + K+ RLV+LPQA++  IP + + ++ L K
Sbjct: 315 SSAYIAEVVRGGLAALPKGQYEAADALGLDYWKSMRLVILPQALKISIPGIVNTFIGLFK 374

Query: 337 NSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +++L V +G  D + +   I   T   G   E+ +     +      +  +   L  K+ 
Sbjct: 375 DTTLVVFIGLLDPIGLSNAIRASTEWNGIYWELFVFIGLCFFIFCFSMGRYSLFLEKKLR 434

Query: 394 LKEK 397
            + +
Sbjct: 435 REHR 438



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+    +  SG+  +  +G ++  GR S   L+     +++EV R +P +V +F     
Sbjct: 231 GFMLAMIIGISGIALSLPLGIVLALGRQSDLFLINKCSVIFIEVIRGVPLIVWLFTASLL 290

Query: 152 VLSVLPIPDHSIVL 165
           +   LP   +  ++
Sbjct: 291 LNYFLPPGTNFDLM 304


>gi|239833864|ref|ZP_04682192.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821927|gb|EEQ93496.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 369

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 8/262 (3%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           ++ I   V +  +      ++          F + L  +          TN  IF  S +
Sbjct: 113 WQVISYAVAVLIICAGAWFMIVNDAAVSRTFFDVSLIAKSAGTVLKAFGTNIVIFFVSAI 172

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L +V +L    ++R    K GK + +L  +T        L  I   Y + F  P+ G   
Sbjct: 173 LILVWALVI-AIARTLPGKAGKPIRVL--ATLYSDLFRGLPAIITIYLIGFGLPLTGLPI 229

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               S+         IAL+    A+ +E+ R+G+ +V   Q+ AA +LGL++ +  R V+
Sbjct: 230 LKDLSSN----AYAIIALTLTYGAYTSEVYRAGIESVHPSQIAAARSLGLSYARTMRYVV 285

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +P A+R IIPPL +  ++L K+++L   +G  D  +    I       +  +     +++
Sbjct: 286 VPLAVRGIIPPLMNNCISLQKDTALVAIIGTIDAFNQSKIIAANYFN-LSAVTTVAILFI 344

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            ++I  A F++RL  +   K +
Sbjct: 345 VITIPQARFVDRLIERDRRKMR 366


>gi|77461681|ref|YP_351188.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77385684|gb|ABA77197.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 226

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 18/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T++  A   +F   +GIV +L      R F    G       +   LI   P L
Sbjct: 18  LRGALFTLELTAIGALFGVGVGIVGALVRAWNIRPFSTIFG-------VYVELIRNTPFL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   +           F          E+ +  +A+     A+  EI+R+G+ A+PRG
Sbjct: 71  VQLFFIF-----------FGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPRG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA AL ++  +A R V+L  A+  + P L+SQ + ++  S++   +   +L      
Sbjct: 120 QLEAAAALAMSRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANF 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I ++  +A E   +   IYL ++++I   +N L  + 
Sbjct: 180 IQSRNFRAFETYALTTLIYLCMALLIRQLLNWLGRRY 216



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         +L G + T  L   G +    +G +    R    +  + I  VYVE+ R
Sbjct: 6   DFLPVVENTDLLLRGALFTLELTAIGALFGVGVGIVGALVRAWNIRPFSTIFGVYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|260889289|ref|ZP_05900552.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Leptotrichia hofstadii F0254]
 gi|260860700|gb|EEX75200.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Leptotrichia hofstadii F0254]
          Length = 245

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           VL          +   +    IAL   +AA++ E +RSG+ ++ +GQMEAA A G+ +R 
Sbjct: 100 VLQLLTLSFVVVIFNNYWIALIALGLNSAAYVEETIRSGIESIDKGQMEAARATGMPYRM 159

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           A   +++PQA+++I+P L ++++NL K +++   +   D+     ++      +++ IL 
Sbjct: 160 AMNEIIMPQAIKNILPALLNEFINLFKETAVVGYISVVDITMNSKSLQAVYY-SVKPILF 218

Query: 370 WMFIYLSLSIMIALFMNRLNAKIA 393
              +Y     + +    RL  ++ 
Sbjct: 219 TGLVYYISVKLFSFIGKRLEMRLK 242


>gi|288550054|ref|ZP_05969126.2| glutamate/aspartate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316572|gb|EFC55510.1| glutamate/aspartate ABC transporter, permease protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 250

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 18/243 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 9   WNWGIFLQQAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGILRTVPNRFLSSL 68

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   +      +     QF           F+S
Sbjct: 69  GTLYVELFRNVPLIVQFFTWYLVIPELLPENIGMWFKAELDPNVQF-----------FVS 117

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 118 SMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 177

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++  I L MN +
Sbjct: 178 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMNLV 237

Query: 389 NAK 391
             K
Sbjct: 238 ERK 240



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ +  I A +IG+L G 
Sbjct: 7   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLIGSLFGI 56

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 57  LRTVPNRFLSSLGTLYVELFRNVPLIVQFFTWYLVIPELLPENIGMW 103


>gi|153853974|ref|ZP_01995307.1| hypothetical protein DORLON_01298 [Dorea longicatena DSM 13814]
 gi|149753356|gb|EDM63287.1| hypothetical protein DORLON_01298 [Dorea longicatena DSM 13814]
          Length = 214

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 15/226 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE---KTGKALPLLYISTF 227
           ++ + L      M    K+ V   V+GI +      L  +  +   K GKA+  +YI  +
Sbjct: 1   MDMKFLDVLLPMMFEGLKLTVLIAVVGIGIGFLIGSLCGYLLQSKYKVGKAIAEVYI--W 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I   P +V     Y   F  P L   +                 ++  + AFI+EIV+ 
Sbjct: 59  IIRATPLMVQALYGY---FVIPKLVGVDISSTIV-------GIGVIALNSGAFISEIVKG 108

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L+ +  GQ EA  +LGLT  +    +++P A +S +P L +Q++  +K+++L  A+   
Sbjct: 109 ALMGIDPGQKEAGASLGLTSSQTMLHLIIPPAFKSALPALFNQFITSVKDTALLSAIAVN 168

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++          + +AI         YL +  ++ +   ++  K+ 
Sbjct: 169 EITHQAQAYAALSFKAIPTYTALAVFYLIILSILIIVQKQIERKMR 214



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 36/82 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  +A  G+    +IG+L G    S  K+   I  VY+ + R  P +V   + 
Sbjct: 13  MFEGLKLTVLIAVVGIGIGFLIGSLCGYLLQSKYKVGKAIAEVYIWIIRATPLMVQALYG 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
           Y  +  ++ +   S ++  G+ 
Sbjct: 73  YFVIPKLVGVDISSTIVGIGVI 94


>gi|134295678|ref|YP_001119413.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138835|gb|ABO54578.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 241

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   V +    +  +L    L        G   PL  +    I     + ++ L +  +F
Sbjct: 27  ALSLVLAMASAVASALLGVALGVGMALARG---PLRVLLLAFIGFFRAIPVLMLIFWTYF 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT
Sbjct: 84  LMPMLLHMDV-------PGLATVVCALALIGGAYLAHAVHAGIVAAGEGQRQAGLSLGLT 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
             +  R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  V   + N+       
Sbjct: 137 RWQTVRHVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAP 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I L    +YL L   +      L   ++ +E+
Sbjct: 197 IFLFVAVLYLVLCTSLDGAARWL---LSRRER 225


>gi|148240913|ref|YP_001220414.1| inner membrane amino-acid ABC transporter permease protein
           [Bradyrhizobium sp. BTAi1]
 gi|146411289|gb|ABQ39742.1| Inner membrane amino-acid ABC transporter permease protein
           [Bradyrhizobium sp. BTAi1]
          Length = 360

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 7/244 (2%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
               P        G++++   L    +      +    S   G+ ++L  T ++      
Sbjct: 112 WSVRPASWTPRLLGLWISALALIVWMMGGGLGLEEVPTSAWGGLPVTLILTVVAIGIAFP 171

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV----LGQFNFIGGSTVSPEFMSLY 270
            G  L L   ST     +  +V I     L     +    +    F+  + +  +F+   
Sbjct: 172 VGILLALARRSTMPAVRIAAVVTIESVRGLPLLSILFVASIMLPLFLPEALLPDKFVRAL 231

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +AL+ + AA++AE++R GL A+PRGQ EAA ALGL   +    V+LPQA+R +IP L + 
Sbjct: 232 VALTIFAAAYLAEVIRGGLQAIPRGQYEAAAALGLPFWRTQYRVILPQAIRVVIPALANT 291

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNR 387
            + ++KN+SL + VG  DL+S G   +          E  L    I+ +LS   A F + 
Sbjct: 292 IIVMIKNTSLVLVVGLFDLISSGKAALADPAWPSPAAETFLFIGGIFFALSFSFARFADF 351

Query: 388 LNAK 391
           L  +
Sbjct: 352 LERR 355



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 59/196 (30%), Gaps = 15/196 (7%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L    +  A  +G L+   R S    V     V +E  R +P L ++F     
Sbjct: 154 GLPVTLILTVVAIGIAFPVGILLALARRSTMPAVRIAAVVTIESVRGLPLLSILFVASIM 213

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV----FSFVLGIVLSLFATRL 207
           +   LP           +       +     +       +    +     + L  + T+ 
Sbjct: 214 LPLFLPEALLPDKFVRALVALTIFAAAYLAEVIRGGLQAIPRGQYEAAAALGLPFWRTQY 273

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL-----------HFDKPVLGQFNF 256
                +     +P L  +  ++    +LVL+   + L            +  P    F F
Sbjct: 274 RVILPQAIRVVIPALANTIIVMIKNTSLVLVVGLFDLISSGKAALADPAWPSPAAETFLF 333

Query: 257 IGGSTVSPEFMSLYIA 272
           IGG   +  F     A
Sbjct: 334 IGGIFFALSFSFARFA 349


>gi|302542075|ref|ZP_07294417.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302459693|gb|EFL22786.1| glutamate permease [Streptomyces himastatinicus ATCC 53653]
          Length = 311

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 22/196 (11%)

Query: 209 RHFHEKTGKALPLLYISTF-----LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           R    K  + L   +I  F     LI      VL+                  +G +  S
Sbjct: 92  RLSDHKPVRWLATGFIELFRAIPLLITIYVLWVLLLTYR------------TDLGLTGDS 139

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F +L + L+ Y  +  AE++R+G+ +VPRGQ EAA ALG++  +    VL+PQA+R++
Sbjct: 140 TGFWALVVGLTVYNGSVQAEVLRAGINSVPRGQREAAYALGMSKTQVMTTVLIPQAVRAM 199

Query: 324 IPPLTSQYLNLLKNSSLAVAVGF-----ADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           +P + SQ +  LK++SL   + +           G  ++N     + +I++   IY+++ 
Sbjct: 200 LPTIISQLVVTLKDTSLGYVITYQELLFQLQQLAGNIVVNDDNPYVPVIIVGGTIYIAMC 259

Query: 379 IMIALFMNRLNAKIAL 394
           + ++     +  +   
Sbjct: 260 LALSALATWIERRGRR 275



 Score = 43.8 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 35/62 (56%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +     + + ++G L+   RLS +K V W+   ++E+FR IP L+ I+ L+  
Sbjct: 66  GVLTTLQVFAVASVLSLVLGVLLAVARLSDHKPVRWLATGFIELFRAIPLLITIYVLWVL 125

Query: 152 VL 153
           +L
Sbjct: 126 LL 127


>gi|126727121|ref|ZP_01742958.1| putative glutamine ABC transporter permease protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126703549|gb|EBA02645.1| putative glutamine ABC transporter permease protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 287

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 13/222 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    + +   A       +LG++++L           K+    PL             +
Sbjct: 79  LEAFKINIMIFAWSAPAIAILGLLIALARD-------VKSPALFPLKIFGAVFTDVFRGV 131

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I   Y + F  P LG          +  ++   +AL    +A++AEI RSG+ +V   
Sbjct: 132 PVILTVYLIGFGIPGLGL-----PRPWNSPYIWGSLALILTYSAYVAEIFRSGIDSVHHS 186

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA++LGL+ R+  R V+LPQA+R+++P   +  + L K+ SL   +G  ++    G 
Sbjct: 187 QRSAALSLGLSERQVMRDVVLPQAIRNVVPSQMNMLIALQKDVSLLSFIGPVEIFRQAGV 246

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +         +    I+L ++I    + + L A+ + + +
Sbjct: 247 FKSLLAN-FTPYVGAALIFLIVTIPATRYADYLMARQSRERR 287


>gi|271499711|ref|YP_003332736.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270343266|gb|ACZ76031.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 246

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             +S   +T+  +   +V +F+LG +L +  T   R        + +  + +PL+     
Sbjct: 24  WIISGLQVTVSLSLCAWVIAFLLGSLLGILRTVPHRLLSGIGTCYVEMFRNVPLIVQFFS 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+   L      +     QF           F+S    L  +TAA + E VR+
Sbjct: 84  WYLVVPELLPTKLGMWFKAELDPNIQF-----------FLSSMFCLGMFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+PPLTS+ LNL+KNS++A  +G  
Sbjct: 133 GIQSLPRGQKAAGLAIGLTLAQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLM 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M  +  K  L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFSAITLAYVGINAIIMLLMQIVERKTRL 239



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I+ G   T  L+    + A ++G+L+G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIISGLQVTVSLSLCAWVIAFLLGSLLGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   ++L++ I   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPHRLLSGIGTCYVEMFRNVPLIVQFFSWYLVVPELLPTKLGMW 99


>gi|186472110|ref|YP_001859452.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184194442|gb|ACC72406.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 248

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 14/228 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F     +         +     +   S VLG ++   A  +      K  + L   
Sbjct: 1   MSYTFDFSSFDLYAGMLVRGVGVTLGLTAISTVLGGLVG-MAGAVVAASGPKWARWLIAG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  +A++    A+  
Sbjct: 60  YVEAIRNTPFLV-------------QLFFVFFGLPSLGIHIDEIQAAILAMTVNLGAYAI 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ ++PRGQ++AA ALGL  R+  R V+LPQA+ ++ P L SQ L ++  S++  
Sbjct: 107 EIVRAGIDSIPRGQVQAAQALGLQGRQVFRHVVLPQAIANVFPALLSQVLIVMLGSAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +   DL      I ++  ++ E  +I    YL+LSI++   +NRL  
Sbjct: 167 QISVPDLTYAANYIQSRNFRSFEAYVIITATYLALSIVLRQLLNRLGK 214



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S   YA  ++ G   T  L     +   ++G        S  K   W+   YVE  R
Sbjct: 6   DFSSFDLYAGMLVRGVGVTLGLTAISTVLGGLVGMAGAVVAASGPKWARWLIAGYVEAIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P LV +FF++  + S+    D        M +N
Sbjct: 66  NTPFLVQLFFVFFGLPSLGIHIDEIQAAILAMTVN 100


>gi|227524319|ref|ZP_03954368.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227088550|gb|EEI23862.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
          Length = 214

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 102/219 (46%), Gaps = 19/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+       + S  LG VL+L           K    + LL +  +L+ G P L
Sbjct: 13  LSGTKMTLSIFFWTLICSIPLGAVLALGLVS-------KFKPLVWLLNLYDWLMRGTPLL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  PV+          +   + +   A      A+ AEI R G  +VPRG
Sbjct: 66  LQLIFVF---YGLPVI--------GIIFERYDAALFAFILNYTAYFAEIFRGGFQSVPRG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  L L++ +  R +++PQ  + ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 115 QFESACVLRLSYGQTIRKIIIPQVFKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNV 174

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +    +  +++   IYL+L+ +  + +  +  + ++
Sbjct: 175 ATARD-VTLLPLVLVGIIYLALTAICTIVLKVIEKRSSV 212


>gi|190891585|ref|YP_001978127.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696864|gb|ACE90949.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 381

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 100/228 (43%), Gaps = 20/228 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +      SF LGI+L+L      R       + + +++I       L T+
Sbjct: 169 WGGLLVTLVLSFVGIAVSFPLGIILAL-----GRRSQMPVIRTVCIVFIEVVRGVPLITV 223

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A           +    F+       + +   I +S + +A++AE++R GL A+P+G
Sbjct: 224 LFMA----------SVMLPLFLPAGWTVDKLLRAIIGVSIFASAYMAEVIRGGLQAIPKG 273

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A +LGL + +  RL+++PQA++ +IP + + ++ + K++SL   +   DL+ +   
Sbjct: 274 QFEGADSLGLGYWQKMRLIIMPQAIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGIVRL 333

Query: 356 -----IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                        +  ++   F +      ++ +   +   +    K+
Sbjct: 334 NFVDPNWATAVTPLTGLIFAGFSFWLFCFGMSRYSAFMERHLDTGHKR 381



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +C V++EV R +P + V+F  
Sbjct: 168 LWGGLLVTLVLSFVGIAVSFPLGIILALGRRSQMPVIRTVCIVFIEVVRGVPLITVLFMA 227

Query: 149 YKSVLSVLPIPD 160
              +   LP   
Sbjct: 228 SVMLPLFLPAGW 239


>gi|82699627|ref|YP_414201.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis biovar Abortus 2308]
 gi|254689009|ref|ZP_05152263.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 6 str. 870]
 gi|254697144|ref|ZP_05158972.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 2 str. 86/8/59]
 gi|254707028|ref|ZP_05168856.1| binding-protein dependent transport system inner membrane protein
           [Brucella pinnipedialis M163/99/10]
 gi|254730040|ref|ZP_05188618.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 4 str. 292]
 gi|256113278|ref|ZP_05454146.1| binding-protein dependent transport system inner membrane protein
           [Brucella melitensis bv. 3 str. Ether]
 gi|256257259|ref|ZP_05462795.1| binding-protein dependent transport system inner membrane protein
           [Brucella abortus bv. 9 str. C68]
 gi|256264231|ref|ZP_05466763.1| amino acid ABC transporter permease [Brucella melitensis bv. 2 str.
           63/9]
 gi|260545547|ref|ZP_05821288.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260754502|ref|ZP_05866850.1| ABC-type arginine transport system, permease component [Brucella
           abortus bv. 6 str. 870]
 gi|260757723|ref|ZP_05870071.1| ABC transporter permease [Brucella abortus bv. 4 str. 292]
 gi|260761548|ref|ZP_05873891.1| ABC transporter permease [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883531|ref|ZP_05895145.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|265994690|ref|ZP_06107247.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|82615728|emb|CAJ10724.1| Binding-protein-dependent transport systems inner membrane
           component:Tetracycline resistance protein [Brucella
           melitensis biovar Abortus 2308]
 gi|260096954|gb|EEW80829.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260668041|gb|EEX54981.1| ABC transporter permease [Brucella abortus bv. 4 str. 292]
 gi|260671980|gb|EEX58801.1| ABC transporter permease [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674610|gb|EEX61431.1| ABC-type arginine transport system, permease component [Brucella
           abortus bv. 6 str. 870]
 gi|260873059|gb|EEX80128.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|262765803|gb|EEZ11592.1| polar amino acid ABC transporter [Brucella melitensis bv. 3 str.
           Ether]
 gi|263094477|gb|EEZ18299.1| amino acid ABC transporter permease [Brucella melitensis bv. 2 str.
           63/9]
 gi|326408767|gb|ADZ65832.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis M28]
 gi|326538485|gb|ADZ86700.1| binding-protein-dependent transport systems inner membrane
           component:Tetracycline resistance protein [Brucella
           melitensis M5-90]
          Length = 343

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 20/265 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           IP   +   L+  V  V+             ++         +T+  +      S  LGI
Sbjct: 94  IPKKGLNAILFFLVFPVVAFFLLVGGWFGLPYVETPLWGGLLVTLVLSFVGIAVSLPLGI 153

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL+L      R       K L +++I       L T++ +A      F  P         
Sbjct: 154 VLAL-----GRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMASVMLPLFLPP--------- 199

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 + +   I ++ + +A++AE+VR GL A+PRGQ E A ALGL++ + T LV+LPQ
Sbjct: 200 -GVTFDKLLRALIGVALFASAYMAEVVRGGLQAIPRGQYEGADALGLSYWQKTGLVVLPQ 258

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFI 373
           A++ +IP + + ++ L K++SL   +G  DL+ +     +             ++   F+
Sbjct: 259 ALKLVIPGIVNTFIGLFKDTSLVYIIGMFDLLGIVRQNFSDANWASPQTPATGLIFAGFV 318

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           +      ++ +   +  ++    K+
Sbjct: 319 FWIFCFAMSRYSIFMERRLDTGHKR 343



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +  +++E+ R +P + V+F  
Sbjct: 130 LWGGLLVTLVLSFVGIAVSLPLGIVLALGRRSKLPVIKTLSIIFIEMVRGVPLVTVLFMA 189

Query: 149 YKSVLSVLPI 158
              +   LP 
Sbjct: 190 SVMLPLFLPP 199


>gi|312867750|ref|ZP_07727956.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
 gi|311096813|gb|EFQ55051.1| ABC transporter, permease protein [Streptococcus parasanguinis
           F0405]
          Length = 213

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 19/226 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L   +LT+   A + + S  LGIV++      S+  H        LL I
Sbjct: 1   MQYALEILPSLLKGASLTLQVFAFVLILSIPLGIVVAFLLQLRSKILHG-------LLTI 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + +++ G P L+ +   Y +                       +   A +   AA+ AEI
Sbjct: 54  NIWIMRGTPLLLQLIFIYYV-----------LPSIGIRIDRLPAAITAFTLNYAAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G++A+P GQ EAA  L L+  +  R ++LPQ ++ ++P + ++ ++L+K++SL  A+
Sbjct: 103 FRGGIVAIPTGQYEAAKVLKLSSWQTIRYIILPQVVKIVLPSVFNEVMSLIKDTSLVYAL 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G +DL+    T  N+      + L   F YL L  ++ +   ++  
Sbjct: 163 GISDLILASRTAANRDASLAPMFLAGAF-YLILIGIVTIIAKQVEK 207


>gi|224369137|ref|YP_002603301.1| GlnP4 [Desulfobacterium autotrophicum HRM2]
 gi|223691854|gb|ACN15137.1| GlnP4 [Desulfobacterium autotrophicum HRM2]
          Length = 213

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 15/223 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + + F    +     + + +  +G  +      L R +   T + +   Y  + ++  +
Sbjct: 5   FKMMQFLLPGLGVTLCVTLIALFMGCCIGAIMAVL-RVYGGVTARTIATSY--SIVVRAI 61

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V+I + Y +            +        FMS  +AL   + A+  EI R  +++V
Sbjct: 62  PVVVIIFILYFV------------VSEFVDLSPFMSGALALGFASGAYQTEIFRGAILSV 109

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQM AA  +G+   KA R +++PQAMR  IP L ++   +LK+SSL   +G  +L+  
Sbjct: 110 PQGQMTAARGIGMGRAKAIRCIIMPQAMRIAIPSLINEVSLVLKDSSLVFVIGVPELLRR 169

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                  T + +         Y+ L+++++  +  +  + A+ 
Sbjct: 170 AQYASASTMEPLLAFGTAALFYILLTLVLSKVLEAIEQRFAVS 212


>gi|163758476|ref|ZP_02165564.1| putative transport system permease abc transporter protein [Hoeflea
           phototrophica DFL-43]
 gi|162284765|gb|EDQ35048.1| putative transport system permease abc transporter protein [Hoeflea
           phototrophica DFL-43]
          Length = 243

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 3/206 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            + ++ V  +VLG ++ +      + +     + +  L + T L+  +P LVLI L Y  
Sbjct: 31  VSLQVAVGGYVLGFLIGIGGAA-GKLYGGPILRDI--LDVYTTLVRAVPELVLILLLYYA 87

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D                    +    +     A+  E++R    AVP GQ+EAA A G
Sbjct: 88  GTDALNQFMALIGAEPMDISGLAAGIFVIGVVQGAYQTEVLRGAFKAVPHGQIEAARAYG 147

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R + LP  +   +P L + +L   K+++L   VG A+L  V       T    
Sbjct: 148 MTSFQVLRRITLPGMLPHAVPGLANLWLIATKDTALLAVVGVAELTLVTRQAGGTTKSYF 207

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
                   +YL ++++  + + R+  
Sbjct: 208 LFFFAAGLLYLMVTLISNVGIRRIER 233



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   +  +A  G +   +IG    AG+L    ++  I  VY  + R +P LV+
Sbjct: 21  WGGVLLKGLAVSLQVAVGGYVLGFLIGIGGAAGKLYGGPILRDILDVYTTLVRAVPELVL 80

Query: 145 IFFLYKSVLSV 155
           I  LY +    
Sbjct: 81  ILLLYYAGTDA 91


>gi|320178444|gb|EFW53412.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella boydii ATCC 9905]
 gi|332094326|gb|EGI99377.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           boydii 5216-82]
          Length = 246

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGIWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +  G +++ +  A E        Y+ ++  I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRL 239



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGIW 99


>gi|296159866|ref|ZP_06842687.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295889849|gb|EFG69646.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 248

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S VLG ++ +    ++     K  + +   Y+   LI   P +V +   +  
Sbjct: 23  VTLGLTAVSTVLGAIVGIAGASVA-VAGPKWARWVVASYVE--LIRNTPFIVQLFFVF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F          E  +  +A++    A+  EIVR+G+ ++ RGQ++AA ALG
Sbjct: 78  ---------FGLPSLGIHIDEVQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+  R V+LPQA+ ++ P L SQ L ++  S++   +   DL      I ++  ++ 
Sbjct: 129 LHGRQVFRYVVLPQAIANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
           E  LI    YL LSI++   +NRL  
Sbjct: 189 ESYLIITATYLLLSIVLRQILNRLGR 214



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 39/95 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA  +  G   T  L     +   I+G    +  ++  K   W+   YVE+ R
Sbjct: 6   DFSGFGLYAGMLARGVAVTLGLTAVSTVLGAIVGIAGASVAVAGPKWARWVVASYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P +V +FF++  + S+    D        M +N
Sbjct: 66  NTPFIVQLFFVFFGLPSLGIHIDEVQAAILAMTVN 100


>gi|71064882|ref|YP_263609.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK
           [Psychrobacter arcticus 273-4]
 gi|71037867|gb|AAZ18175.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK
           [Psychrobacter arcticus 273-4]
          Length = 223

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  K+   + V GI L      L R    K  +    LY++ F    L  ++L       
Sbjct: 20  TTLKVLFLAIVGGISLGTVL-ALMRLSGIKALEIPAKLYVNYFRSVPLLLVLL-----WF 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P++  +       +   F S  +A   + AA+ +E+VR+G+ ++  GQ+ AA ALG
Sbjct: 74  YFAVPMIYFWVAGKYLQLDTAFTSCVVAFMMFEAAYFSEVVRAGIQSIGSGQVNAAKALG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T+ +  RL++LPQA R ++P +  Q + L ++++L  A+G  D            G   
Sbjct: 134 MTYGQTMRLIILPQAFRKMLPLILQQCIILFQDTTLVFAIGLTDFFRAAYVRGELMGLLT 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             IL    +Y  +S+  ++ + +L  ++ 
Sbjct: 194 PYILGAGAVYFIISLSASIGVQQLQKRLR 222



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  + F  ++    +GT++   RLS  K +    ++YV  FR++P L+V+ + 
Sbjct: 14  LMGGMLTTLKVLFLAIVGGISLGTVLALMRLSGIKALEIPAKLYVNYFRSVPLLLVLLWF 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y +V  +        +     F +
Sbjct: 74  YFAVPMIYFWVAGKYLQLDTAFTS 97


>gi|167836672|ref|ZP_02463555.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia thailandensis MSMB43]
          Length = 249

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 11/173 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 78  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 130

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA++ + P   +Q+++L+K++SLA  VG
Sbjct: 131 HAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVKIMTPSFVNQWVSLVKDTSLAYIVG 190

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L  V   + N+      +I L    IYL L   + +    L   +A + +
Sbjct: 191 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTALDVAATWL---LAGRRR 240


>gi|104782329|ref|YP_608827.1| arginine/ornithine ABC transporter permease [Pseudomonas
           entomophila L48]
 gi|95111316|emb|CAK16036.1| Arginine/ornithine ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 229

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 8/223 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    L++         +  LG++ +  A RLS            +  + T ++ G+P L
Sbjct: 10  LEGAWLSVSLALLAMALAITLGLIGA--ACRLSPLKWLA-----AVGDVYTTVVRGIPDL 62

Query: 236 VLIALKYQLHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           VLI L +    D    L              F++    +     A+++E  R   +A+PR
Sbjct: 63  VLILLVFYGGQDLVNRLALALGYEQYIDINPFIAGVCTMGFIFGAYLSETFRGAFLAIPR 122

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA  A G++  +    + +PQ +R  +P  T+ +L L K+++L   +G  D++    
Sbjct: 123 GQAEAGAAYGMSGLQVFWRISVPQMVRLALPGFTNNWLVLTKSTALISVIGLQDMMFKAK 182

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              + T Q     L    +YL L+ +  + +  +  + ++  K
Sbjct: 183 NAADATHQPFTFFLAVAGLYLLLTSVSLVLLRGVEKRYSVGVK 225


>gi|237801379|ref|ZP_04589840.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806662|ref|ZP_04593366.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024238|gb|EGI04295.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027776|gb|EGI07831.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 225

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 14/207 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I  F+ +L ++LSL    L R    +  +    +Y+   ++ G+  LVL+   + L
Sbjct: 24  VTLQITFFAELLVLMLSLMI-ALMRLSPIRVLRWFATIYVE--VLRGISALVLL---FYL 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P+                 +  + L    +A+ +EI+RS LI V +GQ +A  AL 
Sbjct: 78  FFILPLF--------GVRLSPMTTGVLGLGLTFSAYGSEIIRSALINVSKGQRDALRALD 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
                A R ++LPQA+  +IPP+ +Q + LLK +SL   +   DL   G  ++   GQ  
Sbjct: 130 FGPVNAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLVTTLGQQT 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
            I  I +  Y  ++  ++  + R    
Sbjct: 190 LIWSIVLICYFVMAWPLSWLVRRYERH 216



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G + T  + F   +   ++  ++   RLS  +++ W   +YVEV R I  LV+
Sbjct: 14  IARQLAHGSLVTLQITFFAELLVLMLSLMIALMRLSPIRVLRWFATIYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGVRLSPMTTGVLGL 98


>gi|226366163|ref|YP_002783946.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226244653|dbj|BAH55001.1| glutamate ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 226

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 6/226 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +++ +     T+   A   V + +LG +L+       R       + +   Y++ F   
Sbjct: 7   YSDQLIDAFWTTVQLTAFSAVGALILGTILAAM-----RVSPIPVARGVGAAYVTIFRNT 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L TL++I   + L     V               F    + LS YTAAF+ E +RSG+ 
Sbjct: 62  PL-TLIIIFCSFGLFQTMGVKLAPEQSPTFFEENNFRLAVLGLSIYTAAFVCESLRSGIN 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V  GQ EA  +LGLT  +  RL++LPQA R++  PL S  + L KN+++A  +G A+  
Sbjct: 121 TVHVGQAEAGRSLGLTFSQNLRLIVLPQAFRAVTAPLGSVLIALTKNTTIASVIGVAEAS 180

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +I        +  I+   ++ L++ + L    L+ +  +  
Sbjct: 181 LLMKEMIENEAAIFVVGGIFALGFVILTLPMGLLFGYLSKRFEVAR 226



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 46/105 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y+  ++  F  T  L     + A I+GT++ A R+S   +   +   YV +FRN P  
Sbjct: 5   SKYSDQLIDAFWTTVQLTAFSAVGALILGTILAAMRVSPIPVARGVGAAYVTIFRNTPLT 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           ++I F    +   + +       P     NN  L+   L++ T A
Sbjct: 65  LIIIFCSFGLFQTMGVKLAPEQSPTFFEENNFRLAVLGLSIYTAA 109


>gi|85717303|ref|ZP_01048257.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           sp. Nb-311A]
 gi|85695892|gb|EAQ33796.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           sp. Nb-311A]
          Length = 506

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 20/227 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +    V S  +GI L+L      R       +   + +I  +    L T 
Sbjct: 294 WGGLLVTLVVSVTGIVSSIPIGIALAL-----GRRSTLPLIRIFSIAFIEFWRGVPLIT- 347

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL    Y L           F+ G+      + + I ++ +  A+ AE++R GL A+P G
Sbjct: 348 VLFFATYMLPL---------FLPGNFTIDGLVRVLIGIALFAGAYNAEVIRGGLAAIPSG 398

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV--- 352
           Q EAA ALGL++ K T L+++PQA+R++IP L + ++ L K++SL   V   DL+ +   
Sbjct: 399 QAEAAHALGLSYWKTTGLIVMPQAVRNVIPGLVNSFIALFKDTSLVSIVALFDLLGILRA 458

Query: 353 --GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                                 IY +    ++ +   +  ++    +
Sbjct: 459 SFADPAWATPTTLFTGFAFTGLIYFAFCFSMSRYSLFVEHRLNAHRR 505



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  ++ +G++ +  IG  +  GR S   L+      ++E +R +P + V+FF 
Sbjct: 293 LWGGLLVTLVVSVTGIVSSIPIGIALALGRRSTLPLIRIFSIAFIEFWRGVPLITVLFFA 352

Query: 149 YKSVLSVLP 157
              +   LP
Sbjct: 353 TYMLPLFLP 361


>gi|322805718|emb|CBZ03283.1| amino acid ABC transporter, permease protein [Clostridium botulinum
           H04402 065]
          Length = 221

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 86/182 (47%), Gaps = 10/182 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K   ++  +++S F   G P +  +   Y              I          +  
Sbjct: 46  LKIKVLYSISKIWVSFF--RGTPLIAQLFFLYFGIVQL--------IPSLKNMDAMTAAI 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K S+LA  +G  ++++V  +    + + +E     + IY  +      F N L  
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQSEGASSYRFLESFTAVIIIYWIIISAFGYFQNILER 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|150376684|ref|YP_001313280.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150031231|gb|ABR63347.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 220

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 18/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V   ++G++ +      S    +  G            I   P LVL+   Y    
Sbjct: 29  VVAIVVGCMIGLITAFGLVSKSVALRKPAG-------FYVTAIRNTPILVLVLFSY---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          +  S  + L+ Y+ A++AE+ R GLIA+P GQ EA +A+GLT
Sbjct: 78  -------FALPELGVRLGKIESFVLTLAIYSGAYLAEVFRGGLIAIPPGQREAGLAIGLT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    + +P  +RS++P L S  ++L K++SLA A+   +L      I  ++ + IE 
Sbjct: 131 EMQIRTSITIPLMLRSVLPSLGSTIISLFKDTSLAAAIAVPELTFEARKINVESFRVIET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++   +Y++   ++A  M  +  ++A+  
Sbjct: 191 WIVASCLYVATCSLLAALMRGVERRLAVPR 220



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 30/89 (33%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           A   ++   +IG +   G +S +  +      YV   RN P LV++ F Y ++  +    
Sbjct: 28  AVVAIVVGCMIGLITAFGLVSKSVALRKPAGFYVTAIRNTPILVLVLFSYFALPELGVRL 87

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
                    + + +             A 
Sbjct: 88  GKIESFVLTLAIYSGAYLAEVFRGGLIAI 116


>gi|283786382|ref|YP_003366247.1| histidine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
 gi|282949836|emb|CBG89459.1| histidine ABC transporter, permease protein [Citrobacter rodentium
           ICC168]
          Length = 228

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L     ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGLVG-AGAKLSQNRVTGLIFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   IG   + P  ++  I L     A+  E  R   +AVP G +EAA A 
Sbjct: 72  LQIALNAVTEAMGIGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPTGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V         T + 
Sbjct: 131 GFTSSQTFRRIMFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAVVCGVIYLIFTTVSNGVLLFLERRYSVGVKR 225



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +    +LS N++   I   Y  + R +P LV++  
Sbjct: 8   VILQGAIVTLELALSSVVLAVLIGLVGAGAKLSQNRVTGLIFEGYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|238027409|ref|YP_002911640.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           glumae BGR1]
 gi|237876603|gb|ACR28936.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           glumae BGR1]
          Length = 241

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G V       L +    +T + L   Y + F       LV+    +  
Sbjct: 25  MTIVLTLSALAIGSVFGGLVAAL-KLSRRRTLRVLGDAYTTVFR-GVPELLVIYLFYFGG 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F    +A+   + A+ AE+ R+ ++AV RG++EAA A+G
Sbjct: 83  SSLVTTVGQWFGADGFVGVPPFAIGAVAVGMISGAYQAEVYRAAVLAVSRGELEAARAIG 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +    A R VL+PQ +R  +P L + +   LK+S+L    G A+L+         T +  
Sbjct: 143 MPRLTAVRRVLIPQVLRFALPGLGNVWQLSLKDSALISVTGLAELLRATQVAAGSTHEYF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +         A++    K+
Sbjct: 203 LFFVAGGVLYLLMTSLSNRVFGTAEARVGRSFKR 236



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 59/154 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              + + +L+G + T  L  S +   ++ G LV A +LS  + +  +   Y  VFR +P 
Sbjct: 12  SQGWGSVLLLGALMTIVLTLSALAIGSVFGGLVAALKLSRRRTLRVLGDAYTTVFRGVPE 71

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+VI+  Y    S++            + +    +    + M + A          + +S
Sbjct: 72  LLVIYLFYFGGSSLVTTVGQWFGADGFVGVPPFAIGAVAVGMISGAYQAEVYRAAVLAVS 131

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                 +R        A+  + I   L F LP L
Sbjct: 132 RGELEAARAIGMPRLTAVRRVLIPQVLRFALPGL 165


>gi|227873563|ref|ZP_03991805.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Oribacterium sinus F0268]
 gi|227840587|gb|EEJ50975.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Oribacterium sinus F0268]
          Length = 245

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 107/254 (42%), Gaps = 22/254 (8%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
              +  +LS          + F      R L    +T+  +    + S  LGI+  LF  
Sbjct: 9   LLTFNILLSANAEKPPVYTILFAGNNFQRLLWGLFVTLRVSLIAVLLSLPLGILFGLFMR 68

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R      +   + +  LY++   I     LVL+ L Y   F    +  F+  G       
Sbjct: 69  R-----KDPISRGISQLYLAFIRIMPP--LVLLFLVY---FGTARIAGFHLSGE------ 112

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             S  +  + +  A + ++VR+ + ++P+ Q E+  +LGL+  +  R +++PQ +R +IP
Sbjct: 113 -ASGILVFTLWGTAEMGDLVRAAIGSIPKHQKESGRSLGLSSWQIYRYIIIPQTVRRLIP 171

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIM 380
              +    ++K +SL V +G  +++  G  II+         +I I  +  F+Y  +   
Sbjct: 172 LSINLITRMIKTTSLIVLIGVVEVLKTGQQIIDANRFQYPKASIVIYAVIFFLYFIVCFP 231

Query: 381 IALFMNRLNAKIAL 394
           I+     L  K+ +
Sbjct: 232 ISQLGKYLEKKLKV 245



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   ++ +  +G L G      + +   I ++Y+   R +PPLV++F +
Sbjct: 38  LLWGLFVTLRVSLIAVLLSLPLGILFGLFMRRKDPISRGISQLYLAFIRIMPPLVLLFLV 97

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y     +             +F   
Sbjct: 98  YFGTARIAGFHLSGEASGILVFTLW 122


>gi|163856555|ref|YP_001630853.1| glutamine ABC transporter permease protein [Bordetella petrii DSM
           12804]
 gi|163260283|emb|CAP42585.1| glutamine transport system permease protein [Bordetella petrii]
          Length = 219

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 12/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F   +    +           KI  +  V G +L   A  ++R +  +   A+  +YI
Sbjct: 1   MQFDWSVIWASMPNLLDGTLMTVKITFWGLVGGFLLGALAG-VARAYGPRLLSAIAQVYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P++                +    L   + A+IAEI
Sbjct: 60  --AVIRGTPIVVQVMFIY---FALPLMVP------GLRVDAIWAAIATLIINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L++V +G  EA  A+GL   K    ++ P A R +IPPL +Q +  LK+SSL + +
Sbjct: 109 VRGSLLSVHKGLKEAGQAMGLPFYKILLHIIGPVAFRRMIPPLGNQCIISLKDSSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G A+L   G  I+    +A+EI      IYL L+  +AL +     ++ +
Sbjct: 169 GVAELTRQGQEIMASNFRAVEIWSAVAIIYLILTGALALALRLAEKRMRI 218



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 39/69 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F G++   ++G L G  R    +L++ I +VY+ V R  P +V + F+
Sbjct: 15  LLDGTLMTVKITFWGLVGGFLLGALAGVARAYGPRLLSAIAQVYIAVIRGTPIVVQVMFI 74

Query: 149 YKSVLSVLP 157
           Y ++  ++P
Sbjct: 75  YFALPLMVP 83


>gi|310766722|gb|ADP11672.1| Putative amino acid ABC transporter, permease protein [Erwinia sp.
           Ejp617]
          Length = 221

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V +   G+ L +    L      K      +  +   LI   
Sbjct: 11  WPYWPELVSGLWVTIQLTVMATTGGVALGIVGAAL---RSGKPSLLSRIWGVYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPNLGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LG+T R+    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGMTRRQTFMRVVLPPALKRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              I ++T  + E+ L+   +YL+LSI +   +
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLMYLALSIAMRQLL 209



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 38/96 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   ++ G   T  L          +G +  A R     L++ I  VYVE+ 
Sbjct: 5   LNFPALWPYWPELVSGLWVTIQLTVMATTGGVALGIVGAALRSGKPSLLSRIWGVYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLIN 100


>gi|222087816|ref|YP_002546354.1| nopaline ABC transporter [Agrobacterium radiobacter K84]
 gi|221725264|gb|ACM28420.1| nopaline ABC transporter [Agrobacterium radiobacter K84]
          Length = 222

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                +   S +LG +L LF   + +    +    +   Y  T ++ GLP L++I + Y 
Sbjct: 13  QVTVLVAAASGILGTLLGLFV-AVIKLSQLRLPVLIGQAY--TTIVRGLPELLVILVVYF 69

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                         G       F +   AL+    A+ AEI R  + ++P+GQ EAA++L
Sbjct: 70  GGTAAIT----ALTGRYVEISAFAAGVAALTVVFGAYCAEIFRGAIQSIPQGQTEAALSL 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +   LV+LPQ +R  +P   + +++LLK++SL   VG  D++ V           
Sbjct: 126 GLASWQVWLLVILPQMIRVALPAFGNLWVSLLKDTSLISIVGLTDIMRVAFIGAGSMRAP 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   L    +YL+++ +       L  ++
Sbjct: 186 LTFYLAASALYLAMTSLSLASFRLLERRL 214


>gi|29828502|ref|NP_823136.1| glutamate transporter permease [Streptomyces avermitilis MA-4680]
 gi|29605605|dbj|BAC69671.1| putative glutamate ABC transporter permease [Streptomyces
           avermitilis MA-4680]
          Length = 296

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 3/155 (1%)

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L  +     PVL    FI  +       +L   L+ Y  + +AE+ RSG+ +V RGQ EA
Sbjct: 110 LVVEFFRAMPVLVMIFFIFVALKVQPLPALVAGLTLYNGSVLAEVFRSGVESVERGQREA 169

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALG+   +    VL+PQA+R+++P + SQ +  LK++SL   + + + +  G  I + 
Sbjct: 170 AFALGMRKTQVMAHVLVPQAVRAMLPAIISQLVVALKDTSLGYLITYEEFLHAGKLIASN 229

Query: 360 TGQAIEIILIWMF---IYLSLSIMIALFMNRLNAK 391
               +  I + M    IY+ + ++++ F   ++ +
Sbjct: 230 LDYDLPFIPVVMVISPIYIGMCMLLSWFAQWVSRR 264



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 18/131 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  +    ++  ++L  +  W V                  L +   F   +  +P+  
Sbjct: 19  TRQRHRLYGVLSTVVLLALVGWIVY----------------LLFDTGQFTYTK-WMPFEY 61

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G  NT        + +  +G L+  GRLS +  V W+  + VE FR +P 
Sbjct: 62  KG-IQELLLRGLGNTLKAFGIAAVLSLALGGLLATGRLSDHAPVRWVATLVVEFFRAMPV 120

Query: 142 LVVIFFLYKSV 152
           LV+IFF++ ++
Sbjct: 121 LVMIFFIFVAL 131


>gi|46190618|ref|ZP_00121272.2| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189438954|ref|YP_001954035.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|322689600|ref|YP_004209334.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691561|ref|YP_004221131.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|189427389|gb|ACD97537.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|291516169|emb|CBK69785.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|320456417|dbj|BAJ67039.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|320460936|dbj|BAJ71556.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 219

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 14/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      R   F          I VF  +L I + L              + +  +YI
Sbjct: 1   MTFDWSFVQRYAPFFVNGTLMTLFISVFGILLAIAVGLV-CAGVEIARIPVARQIVRIYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P LV +   Y L+F  P L          V        + L     +++AE 
Sbjct: 60  E--LSRNTPLLVQL---YFLYFGLPKL--------GVVWSAETCAIVGLGFLGGSYMAEA 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL AVP  Q E A  LGLT  +    V+LPQA+ + IP + +  + L K SS+  A+
Sbjct: 107 MRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVSAI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             AD++ +   +I       E + + +  YL + + I++F   L  +   + +
Sbjct: 167 ALADVMYMAKDLIGMYYSTYESLFMLVVAYLVILLPISIFGTWLERRFDYERR 219



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 40/78 (51%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA   + G + T +++  G++ A  +G +     ++   +   I R+Y+E+ R
Sbjct: 4   DWSFVQRYAPFFVNGTLMTLFISVFGILLAIAVGLVCAGVEIARIPVARQIVRIYIELSR 63

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV ++FLY  +  +
Sbjct: 64  NTPLLVQLYFLYFGLPKL 81


>gi|330820726|ref|YP_004349588.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia gladioli BSR3]
 gi|327372721|gb|AEA64076.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia gladioli BSR3]
          Length = 243

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 14/220 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F  FL  + L +          + + + +    L   A  L+     +  + +  LYI 
Sbjct: 1   MFDSFLAPKYLLWLWQGFGVTLGLALAAGLSSTCLG-AALALAGRSRWRAVRGVARLYIG 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-----------EFMSLYIALS 274
            F     P LV +   Y             ++    V P           EF++ ++ LS
Sbjct: 60  AF--RNTPLLVQLFFWYFGAATLLPDEAIAWLNAQHVLPTPAGALRWPSFEFLAGWLGLS 117

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           CYTAAF+A    SG+  V  GQ +AA ALGLT  +A R ++LPQA+R  +PPL  QY+NL
Sbjct: 118 CYTAAFVAGEFASGIAGVREGQWQAAAALGLTPWQAFRHIVLPQAVRIALPPLFGQYMNL 177

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +KNSSL +A+G A+L      +  ++ +  E   +   +Y
Sbjct: 178 VKNSSLTMAIGLAELSYASRQVETESFRTFEAFGVATLLY 217



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 6/160 (3%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF  T  LA +  + +T +G  +     S  + V  + R+Y+  FRN P LV 
Sbjct: 10  YLLWLWQGFGVTLGLALAAGLSSTCLGAALALAGRSRWRAVRGVARLYIGAFRNTPLLVQ 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN----RGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           +FF Y    ++LP    + +    +        R  SF  L        +  +FV G   
Sbjct: 70  LFFWYFGAATLLPDEAIAWLNAQHVLPTPAGALRWPSFEFLAGWLGLSCYTAAFVAGEFA 129

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           S  A    R    +   AL L     F    LP  V IAL
Sbjct: 130 SGIAG--VREGQWQAAAALGLTPWQAFRHIVLPQAVRIAL 167


>gi|170741315|ref|YP_001769970.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168195589|gb|ACA17536.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 227

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 14/224 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                        ++   +  +G  L    T + R       + L  +Y+    I   P 
Sbjct: 13  RWPSFLDGALLTLELSGIATAVGGALG-GITAIGRRSRHAALRRLCEVYVEA--IRNTPL 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y           F                +AL+    A+  EIVR+GL A+PR
Sbjct: 70  LVQIFLVY-----------FGLASLGFRFSALTVAALALTINVGAYTTEIVRAGLDAIPR 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA  L L+  +  R V+L  A+  + P LTSQ++ L+  SS+   +   +L +V  
Sbjct: 119 GQIEAAEGLALSRAQIYRHVVLLPAIERVYPSLTSQFVLLMLASSVTSQISAEELTAVAN 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            I + T +A E  ++   IY++LS ++      L   +  + ++
Sbjct: 179 YIQSDTYRAFETYIVVALIYVALSFIMRAGFWGLGLVLFPRRRR 222



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 41/103 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             + L G + T  L+         +G +   GR S +  +  +C VYVE  RN P LV I
Sbjct: 14  WPSFLDGALLTLELSGIATAVGGALGGITAIGRRSRHAALRRLCEVYVEAIRNTPLLVQI 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           F +Y  + S+        V    + +N    +   +    +A 
Sbjct: 74  FLVYFGLASLGFRFSALTVAALALTINVGAYTTEIVRAGLDAI 116


>gi|254389485|ref|ZP_05004712.1| glutamate transport system permease protein gluD [Streptomyces
           clavuligerus ATCC 27064]
 gi|294815862|ref|ZP_06774505.1| Putative glutamate ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444204|ref|ZP_08218938.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197703199|gb|EDY49011.1| glutamate transport system permease protein gluD [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328461|gb|EFG10104.1| Putative glutamate ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
          Length = 291

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 3/161 (1%)

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L  +     PVL    FI  +       +L   L+ Y  + +AE+ R+G+ +V RGQ EA
Sbjct: 106 LLVEFFRAMPVLVMIFFIFVALKVQPLPALVAGLTLYNGSVLAEVFRAGVHSVDRGQREA 165

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGL   +    VL+PQA+R+++P + SQ +  LK++SL   + + + +  G  I + 
Sbjct: 166 AYALGLRKTQVMTYVLVPQAVRAMLPAIISQLVVALKDTSLGYLITYEEFLHAGKLIASN 225

Query: 360 TGQAIEIILIWMF---IYLSLSIMIALFMNRLNAKIALKEK 397
               +  I + M    IY+ L ++++ F   +  +     K
Sbjct: 226 LDYDLPFIPVVMVISPIYIGLCMLLSWFATWVARRQRRSPK 266



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 18/131 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  +     +  L +  +  W V+                 L E   F   +   P+  
Sbjct: 15  TRRRHRLYGAVATLAILALLGWIVH----------------LLFETGQFTAAK-WTPFEY 57

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G  NT        + + ++G L+  GRLS +  V W+  + VE FR +P 
Sbjct: 58  KG-IQELLLRGLGNTLKAFAYASVLSLLLGGLLACGRLSDHAPVRWVSTLLVEFFRAMPV 116

Query: 142 LVVIFFLYKSV 152
           LV+IFF++ ++
Sbjct: 117 LVMIFFIFVAL 127


>gi|170696123|ref|ZP_02887258.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170138938|gb|EDT07131.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 258

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 106/214 (49%), Gaps = 17/214 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-----YISTFLIFGLPTLVLIALKYQLH 245
           +    L +VLS+ +  LS       G AL L       +   ++     + ++ L +   
Sbjct: 23  LGGAALTVVLSVVSALLSAVVGLAGGVALALTRGGAYVVLLGIVAFFRAIPVLMLIFWTF 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L   +        P  +++  ALS    A+++  V +G+++V  GQ +AA++LGL
Sbjct: 83  FLMPMLLHIDV-------PGLVAVVCALSLIGGAYLSHAVHAGIVSVGAGQQQAALSLGL 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +A R V+LPQA+R ++P   +Q+++L+K++SLA  VG  +   +   + ++      
Sbjct: 136 TRWQALRHVVLPQAVRIMLPSFVNQWVSLVKDTSLAYIVGVPEFTFLANQVNSRLMIYPA 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I +    +YL L   +    +    ++ L+E++
Sbjct: 196 QIFVFVGIVYLVLCSALQWIAS----RMLLRERR 225


>gi|330817963|ref|YP_004361668.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           gladioli BSR3]
 gi|327370356|gb|AEA61712.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           gladioli BSR3]
          Length = 237

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 89/228 (39%), Gaps = 2/228 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP-LLY 223
           +   +    R   +      T   I ++  V+ I L    +           + L   ++
Sbjct: 1   MIELIQEYWRNYLYTDGYRFTGVAITLWLLVVSIGLGFCLSVPLACARVSKRRWLSGSVW 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           + T++  G P  V + L Y   +   V+     +             +A +  T A+  E
Sbjct: 61  LYTYVFRGTPLYVQLLLCYTGLYSLQVVRDTTML-NQFFRDGMHCTLLAFTLNTCAYTTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    + +   G++EAA A G++     R V+LP A+R  +P  +++ + +L  +++A  
Sbjct: 120 IFAGAIKSTAYGEIEAARAYGMSTFTLYRRVILPSALRRALPLYSNEVILMLHATTVAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               D++ +   + + T  +     I   +YL++S  +     +   +
Sbjct: 180 ATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRQAERR 227



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y      G   T WL    +     +   +   R+S  + ++    +
Sbjct: 5   IQEYWRNYLYTDGYR---FTGVAITLWLLVVSIGLGFCLSVPLACARVSKRRWLSGSVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + D +++  F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQVVRDTTMLNQFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|121608199|ref|YP_996006.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121552839|gb|ABM56988.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 251

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 8/170 (4%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L   +P LV I L Y +     +   F  + G+   P F  + +AL  +T+A IAE 
Sbjct: 78  WVELFRNIPLLVQIFLWYHV-----LPSMFPVLKGA---PGFALVVLALGFFTSARIAEQ 129

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+  +P GQ  A +A+G T  +  R VLLP A R IIPPLTS+ +N+ KNSS+A AV
Sbjct: 130 VRAGIQTLPSGQRYAGLAMGFTTLQTYRYVLLPMAFRIIIPPLTSEMMNIFKNSSVAFAV 189

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             A+L         +T + IE+ L    +Y+  +++I   M  +  ++ +
Sbjct: 190 SVAELTMFAMQAQEETARGIEVYLAVTALYIISALIINRIMVFIEKRVRI 239



 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIP 140
           D++Y   +L  +  T  ++   +  A + G+++G  R L    ++  +   +VE+FRNIP
Sbjct: 27  DTTYLDWMLSAWGWTISVSLLALALALVAGSVIGTLRTLQDRPMIVRLGNAWVELFRNIP 86

Query: 141 PLVVIFFLYKSVLSVLP 157
            LV IF  Y  + S+ P
Sbjct: 87  LLVQIFLWYHVLPSMFP 103


>gi|306841171|ref|ZP_07473887.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
 gi|306845329|ref|ZP_07477904.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306274245|gb|EFM56057.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO1]
 gi|306288797|gb|EFM60115.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella sp. BO2]
          Length = 220

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 14/219 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           +               +V   + G+VL L    L++ +  +    L   YI   +I G P
Sbjct: 8   QYWPILLRGFGLTILCWVLGTIFGMVLGLII-VLAQRYGPRPLGWLIQAYIE--IIRGTP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +   + L++  P++                +  + L+ Y + + AEI RSG +AVP
Sbjct: 65  FLVQL---FVLYYGGPLV--------GLRLDALPAGLLGLTIYGSPYFAEIFRSGFLAVP 113

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ+EAA A+G++       +LLP ++ S +P L +  + L K + +   +   +L+   
Sbjct: 114 RGQLEAARAIGMSEPTIVWRILLPLSLVSALPALVNFSIILTKETVILSIITVPELMYQV 173

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +T + +E  L+    +  L   I+ F  RL  +I
Sbjct: 174 QRMSTETFRYLEANLVLALFFWGLVETISRFGRRLETRI 212



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 37/104 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L GF  T      G I   ++G ++   +    + + W+ + Y+E+ R  P LV
Sbjct: 8   QYWPILLRGFGLTILCWVLGTIFGMVLGLIIVLAQRYGPRPLGWLIQAYIEIIRGTPFLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +F LY     V    D       G+ +               A
Sbjct: 68  QLFVLYYGGPLVGLRLDALPAGLLGLTIYGSPYFAEIFRSGFLA 111


>gi|270261833|ref|ZP_06190105.1| transporter [Serratia odorifera 4Rx13]
 gi|270043709|gb|EFA16801.1| transporter [Serratia odorifera 4Rx13]
          Length = 230

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 3/210 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  + + S  + + L L    L + F  +  + L   Y  T L+ G+P LV++ L +  
Sbjct: 15  LSLCVMLVSLAVALALGLI-NALIKLFGPRWLRWLSTGY--TTLVRGIPELVIMLLLFFG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                         G      F+S  +A+     A+  E  R   + V RGQ+EAA+A G
Sbjct: 72  GEMLVNGFLGLLGLGPLRFNTFISGVLAIGFVFGAYYTETFRGAFLTVERGQLEAAMAYG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +  R VLLPQ +   IP + + +L L+K S+L   +G  D+V +       T +  
Sbjct: 132 MRPGQVFRRVLLPQMLSFAIPGINNNWLGLMKASALVSILGLEDMVWLAEQAGRATQKPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               +   IY+ ++ + +   + L  + AL
Sbjct: 192 LFYFLVALIYMVITAISSWGFSLLARRYAL 221


>gi|222102265|ref|YP_002546855.1| ABC-type amino acid transport system, permease component
           [Agrobacterium radiobacter K84]
 gi|221728382|gb|ACM31391.1| ABC-type amino acid transport system, permease component
           [Agrobacterium radiobacter K84]
          Length = 356

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/254 (21%), Positives = 114/254 (44%), Gaps = 14/254 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           ++  K ++S   +     +L  G+ +     +     +     + V        ++L   
Sbjct: 112 YWGSKLLISWPVVILLLWLLMAGILVAPPIPTNQWGGLPITLIVSVIGLATAFPIALLL- 170

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L+R       + L + +I       L  ++ IA          +L     +       +
Sbjct: 171 ALARRSSMGILRTLAVAFIECLRGIPLIAVLYIA----------MLIIPMALPSEATLDK 220

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   I ++ + +A++AE++R+GL ++P GQ+EAA +LG  + + T+LV+LPQA+R++IP
Sbjct: 221 LLRAQIGITLFVSAYLAEVIRAGLQSIPAGQLEAAYSLGFGYWRTTQLVVLPQALRAVIP 280

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIA 382
            + +  + +L N+SL   +G +DL++ G          G   E  +    IY ++S + +
Sbjct: 281 AIVNLSIGILLNTSLLAVIGISDLLNTGKIAATDPVWLGFYTEAFVFTGAIYFAISFVAS 340

Query: 383 LFMNRLNAKIALKE 396
            +   L  ++A   
Sbjct: 341 RYSLWLERRLAAGR 354


>gi|319899029|ref|YP_004159122.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
 gi|319402993|emb|CBI76548.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
          Length = 233

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 88/226 (38%), Gaps = 2/226 (0%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L    F N         +      + +   ++G+ L L    +    + K  KA+  L+
Sbjct: 4   NLSLLSFSNGGWSMVILSSAGMTLSLALCCIIVGLPLGLL-NAIMIQSNIKIVKAIATLF 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            S F       L L  + Y L      +  F  I        F++  +A S   AAF  E
Sbjct: 63  SSVFRGL-PELLTLFLVYYGLQNFIQAIFDFLNIEIIFSINAFIAGVLAFSMVFAAFSCE 121

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +         + Q EAA  LGL+       ++ PQ +R+ +P L++ +L LLK++SL   
Sbjct: 122 VWLGAFRIFDKSQYEAAQVLGLSCSTTFFRIVFPQLIRNALPGLSNNWLTLLKDTSLVST 181

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +   DL+         T + I   L+   IYL  S + +  +  L 
Sbjct: 182 ISLLDLMRQTNLAAAATNEPILFYLLACLIYLLFSAVSSTILRYLE 227



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 8/152 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL     T  LA   +I    +G L      S  K+V  I  ++  VFR +P L+ 
Sbjct: 15  WSMVILSSAGMTLSLALCCIIVGLPLGLLNAIMIQSNIKIVKAIATLFSSVFRGLPELLT 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  +         + +     FLN   +      +       +        + L A
Sbjct: 75  LFLVYYGL--------QNFIQAIFDFLNIEIIFSINAFIAGVLAFSMVFAAFSCEVWLGA 126

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
            R+      +  + L L   +TF     P L+
Sbjct: 127 FRIFDKSQYEAAQVLGLSCSTTFFRIVFPQLI 158


>gi|297567747|ref|YP_003686718.1| hypothetical protein Mesil_3399 [Meiothermus silvanus DSM 9946]
 gi|296852196|gb|ADH65210.1| hypothetical protein Mesil_3399 [Meiothermus silvanus DSM 9946]
          Length = 363

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 7/284 (2%)

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            RL    L   +    V      P  + +  L  +    L        L  G+     G+
Sbjct: 84  ARLGPAGLALLVLAAVVVGVVLFPHSLALPALLLAGAYALGNLARRWGLALGLTAIGVGV 143

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                         + S +L +   + A  L           LPLL         L   V
Sbjct: 144 VLLLPIPIQLWSGLMLSVLLAVSSMVLAFPLGLALALAKAGRLPLLRALATGYVELVRGV 203

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            +     L F    L    F+      P+ +   +  + + AA++AE VR GL AVP+GQ
Sbjct: 204 PLVSVLFLAFVTLPL----FLPEGFRPPQVLRAIVGFTLFAAAYLAENVRGGLQAVPQGQ 259

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALGL        V+LPQA+R++IP +  Q++ L K++SL V +G  DL+ +   +
Sbjct: 260 REAAYALGLNGFHTAYYVVLPQALRAVIPAIVGQFIALFKDTSLVVLIGLLDLLGMAQAV 319

Query: 357 INQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +       +  E+ L    +YL++S   +     +  ++ +  +
Sbjct: 320 LANPLYLHREREVYLFLALVYLAVSGTFSYLGRLIERRLGVGSR 363


>gi|168215245|ref|ZP_02640870.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens CPE str. F4969]
 gi|170713367|gb|EDT25549.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens CPE str. F4969]
          Length = 213

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 19/229 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + L    +     T+       + S  LGI++++      R  + K    +  LY+
Sbjct: 1   MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAIL-----RLSNIKIVNFISSLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ +   +   F  P++              F +  IA +   AA+  EI
Sbjct: 56  --LVMRGTPLLLQLIFIF---FGLPII--------GVSIDRFPAAIIAFTLNYAAYFGEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+  + +GQ EA+  LGL+     + ++LPQ+ +  +P + ++ + L+K++SL   V
Sbjct: 103 FRSGIKDIDKGQFEASKILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVV 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +L+  G    N+    + + LI +   L L  ++    NRL  K +
Sbjct: 163 GIGELLRAGKIASNRDAALLPLFLIGIIY-LLLIGILTKIFNRLEKKYS 210



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G  NT  +    ++ +  +G +V   RLS  K+V +I  +YV V R  P L+ + F+
Sbjct: 11  IIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  +  +    D          LN 
Sbjct: 71  FFGLPIIGVSIDRFPAAIIAFTLNY 95


>gi|313680182|ref|YP_004057921.1| polar amino acid ABC transporter, inner membrane subunit
           [Oceanithermus profundus DSM 14977]
 gi|313152897|gb|ADR36748.1| polar amino acid ABC transporter, inner membrane subunit
           [Oceanithermus profundus DSM 14977]
          Length = 371

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 18/292 (6%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           +    V    +S   L        +    ++P  + +     + +        ++V+ F 
Sbjct: 95  MWIGAVAVFAVSFPVLFPLTRVYLLITVLSLPVGITVGHYLSARVVHAAAAFGALVILFL 154

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           ++     L   + T+       VF+F LG++L+L      R       +AL +LYI   L
Sbjct: 155 LWGKTDRLGGFSFTLMLTVLASVFAFPLGLLLAL-----GRTGKWPVFRALSILYIE--L 207

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G+P + ++ L Y +           F+  S   P   S+ +  S + AA++AE VR G
Sbjct: 208 IRGVPLITVLFLSYYM--------VPLFLPASWEVPTLFSIVVGFSMFAAAYLAEYVRGG 259

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  VP+GQ EAA ALGL+  ++ R ++LPQA+RS+IP L  Q + + K++SL   +G  D
Sbjct: 260 IQGVPKGQYEAAWALGLSGTQSARYIILPQAIRSVIPALIGQLIAIFKDTSLVYILGLFD 319

Query: 349 LVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L+ +  T+       G   E++L    +Y   + +++    +L   + L  +
Sbjct: 320 LLFMAITVARNPKFLGTEREVLLFIALVYFVGAALMSYASRKLERAMGLGTR 371



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 65/198 (32%), Gaps = 5/198 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L GF  T  L     + A  +G L+  GR     +   +  +Y+E+ R +P + V+F  Y
Sbjct: 162 LGGFSFTLMLTVLASVFAFPLGLLLALGRTGKWPVFRALSILYIELIRGVPLITVLFLSY 221

Query: 150 KSVLSVLPIPDHSIVLP----FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             V   LP       L              L+              +     + LS   +
Sbjct: 222 YMVPLFLPASWEVPTLFSIVVGFSMFAAAYLAEYVRGGIQGVPKGQYEAAWALGLSGTQS 281

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN-FIGGSTVSP 264
                  +     +P L      IF   +LV I   + L F    + +   F+G      
Sbjct: 282 ARYIILPQAIRSVIPALIGQLIAIFKDTSLVYILGLFDLLFMAITVARNPKFLGTEREVL 341

Query: 265 EFMSLYIALSCYTAAFIA 282
            F++L   +     ++ +
Sbjct: 342 LFIALVYFVGAALMSYAS 359


>gi|311278731|ref|YP_003940962.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308747926|gb|ADO47678.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 228

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 90/225 (40%), Gaps = 1/225 (0%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI-STFLIFGLP 233
            L   +  +   A + +   +  +VL++              + L L++   T LI G+P
Sbjct: 1   MLYGFSQVIFQGALVTLELAISSVVLAVLIGLAGAAAKLSGNRGLALIFEGYTTLIRGVP 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVL+ L +                        ++  I L     A+  E  R   +AVP
Sbjct: 61  DLVLMLLIFYGLQIALNTITDAMGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAFLAVP 120

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +G +EAA A G T R+  R +L P  MR  +P + + +  +LK ++L   +G  D+V   
Sbjct: 121 KGHIEAATAFGFTSRQTFRRILFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKAT 180

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 T +     ++   IYL  + +    +  L  + ++  K+
Sbjct: 181 QLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  I  G + T  LA S ++ A +IG    A +LS N+ +A I   Y  + R +P LV+
Sbjct: 5   FSQVIFQGALVTLELAISSVVLAVLIGLAGAAAKLSGNRGLALIFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|298291728|ref|YP_003693667.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296928239|gb|ADH89048.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 227

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 94/224 (41%), Gaps = 14/224 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                        ++   + V G ++ +F   + R       + L   Y+    I   P 
Sbjct: 13  RWRSLLDGATLTLELAFIAVVCGAIIGVFG-AIGRRGGNPLIERLCGAYVE--GIRNTPL 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I L Y           F           F    +AL+    A+  EI+R+G  ++ R
Sbjct: 70  LVQIFLVY-----------FGLSSLGLKFSAFTVAAVALTINVGAYTTEIMRAGFDSIVR 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA  LGL+  +    V++   +  + P LTSQ++ L+  SS+   +   +L +V  
Sbjct: 119 GQIEAAEGLGLSKAQIYWHVIIWPGIERVYPALTSQFVLLMLASSVTSQISAEELTAVAN 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            I ++T ++ E  ++   IY++LS ++      L   +  + ++
Sbjct: 179 YIQSETYRSFETYIVVALIYVALSFVMRFGFWLLGLALFPRRRR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 44/104 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             ++L G   T  LAF  ++   IIG     GR   N L+  +C  YVE  RN P LV I
Sbjct: 14  WRSLLDGATLTLELAFIAVVCGAIIGVFGAIGRRGGNPLIERLCGAYVEGIRNTPLLVQI 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           F +Y  + S+        V    + +N    +   +    ++ +
Sbjct: 74  FLVYFGLSSLGLKFSAFTVAAVALTINVGAYTTEIMRAGFDSIV 117


>gi|318077286|ref|ZP_07984618.1| glutamate transporter permease [Streptomyces sp. SA3_actF]
          Length = 269

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 111/257 (43%), Gaps = 17/257 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +    +     + L                   L     T+   A   V +  LG V  +
Sbjct: 1   MWWLVVKLDDKNQLDWIKWKPFFTDSQAWTTYLLPGLGQTLLAAAISMVIALPLGAVFGI 60

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
              RLS H   +   A  + +        +P L+++ + Y ++          +   ST 
Sbjct: 61  A--RLSDHVWVRVPSATVVEF-----FRSIPVLIMMIVAYAVYAQ--------YTSVSTD 105

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                ++   L  Y A+ +AEIVR+G++++P+GQ EAA A+GL   +  R +LLPQ++ +
Sbjct: 106 DRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQTEAAQAIGLRKGQTMRSILLPQSVTA 165

Query: 323 IIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIM 380
           ++P + SQ + ++K++++    +GF++L++    +    G   I    I   IY+ ++  
Sbjct: 166 MLPAIVSQLVVIVKDTAIGGSILGFSELINAVRPLSAAYGANTIACFTIVAVIYIIVNFT 225

Query: 381 IALFMNRLNAKIALKEK 397
           +      L  ++   +K
Sbjct: 226 LTSLATWLEKRLRAGKK 242



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 36/88 (40%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T   ++ T +L G   T   A   M+ A  +G + G  RLS +  V       VE FR+
Sbjct: 23  FTDSQAWTTYLLPGLGQTLLAAAISMVIALPLGAVFGIARLSDHVWVRVPSATVVEFFRS 82

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           IP L+++   Y        +      L 
Sbjct: 83  IPVLIMMIVAYAVYAQYTSVSTDDRPLY 110


>gi|319780313|ref|YP_004139789.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166201|gb|ADV09739.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 215

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 14/226 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     +    L       + + +F+ G ++ +      R    K  + +   YI+ F  
Sbjct: 4   FTFWDIVRNLLLAARWTVLLSLAAFIGGGIVGMIVLFF-RIAKNKWSRRVASGYIALF-- 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L +   F  P+L       G  + P + +  + L+ + +A++AEI RSG+
Sbjct: 61  QGTPLLMQLFLMF---FGLPML-------GLRIEP-WTAAALGLTFFASAYLAEIWRSGV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ +A  +LGL + +  RL++LPQA      P     + L+K+++L   +GF +L
Sbjct: 110 AALPLGQWDAGASLGLHYLQELRLIILPQAFSITRAPTVGFLVQLIKSTALTSIIGFEEL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           V     I N T +  ++  +   I+  +   +  +  RL  + A +
Sbjct: 170 VRTSNAINNATFEPFKVYGLVALIFFVMCFPLTQYARRLEKQAAAR 215



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 37/108 (34%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L+    T  L+ +  I   I+G +V   R++ NK    +   Y+ +F+  P L
Sbjct: 7   WDIVRNLLLAARWTVLLSLAAFIGGGIVGMIVLFFRIAKNKWSRRVASGYIALFQGTPLL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           + +F ++  +  +    +       G+                 A   
Sbjct: 67  MQLFLMFFGLPMLGLRIEPWTAAALGLTFFASAYLAEIWRSGVAALPL 114


>gi|298491369|ref|YP_003721546.1| polar amino acid ABC transporter inner membrane subunit ['Nostoc
           azollae' 0708]
 gi|298233287|gb|ADI64423.1| polar amino acid ABC transporter, inner membrane subunit ['Nostoc
           azollae' 0708]
          Length = 340

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 19/251 (7%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLSLFAT 205
           ++  + L   PI    I   FG+   +  L    L     A +  V SF +G++L+L   
Sbjct: 104 WIAPTWLLSFPINIWLIGGGFGLQSVSTNLWNGLLLTLLMAIVSIVLSFPIGVILAL--- 160

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                   +T       + S   I  +  L +I + +      P+     F+        
Sbjct: 161 -------GRTSNLFLTRWFSILYIEIVRGLPIIGILFIAQVMLPL-----FLPTELRLDR 208

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +     L  ++AA++AE VR GL ++PRGQ EA+ ALG        L++LPQA+R++IP
Sbjct: 209 LIRGIAGLVLFSAAYMAENVRGGLQSIPRGQTEASKALGFNTPLVVILIILPQALRAVIP 268

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIA 382
            +  Q+++L K++SL   VG  +L  +  +I+ Q    G+  E+ +    IY      ++
Sbjct: 269 AIVGQFISLFKDTSLLSLVGLVELTGIARSILAQPQFLGRYAEVYIFIGLIYCLFCYSMS 328

Query: 383 LFMNRLNAKIA 393
           L   +L  ++ 
Sbjct: 329 LASRKLEKQLG 339


>gi|91781145|ref|YP_556352.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693805|gb|ABE37002.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 281

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 12/212 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            N  I + +  +G V+ L    L+   H   G+ +  L++  F          + L Y  
Sbjct: 78  LNVLISLGAIAIGSVIGLAVGALA-LSHSFVGR-VARLWVQAFRNAP-----WLVLIYFT 130

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P   +F   G +   P+++ + + L+   +A IAE+ R  + ++P  Q EAA +L 
Sbjct: 131 TYVFPF--EFTVFGATLPFPDWLKVTLGLALPASANIAEVFRGAVASIPTTQWEAASSLA 188

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTG 361
            +H +    V+LPQ +R ++PP  + Y  +   ++L+  VG  DL+       +   ++ 
Sbjct: 189 FSHTQILWHVVLPQCVRRMLPPWMNVYAIITMGTALSSLVGIHDLIDTAQIASSTVARSS 248

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +  + I+ +    I+ F   L  + A
Sbjct: 249 FTVLTYVATLVIFFAYCYPISQFTRWLERRFA 280


>gi|170732943|ref|YP_001764890.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169816185|gb|ACA90768.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 241

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V    LG+ ++L              + L L +I  F       + ++ L +  +F  PV
Sbjct: 42  VLGVALGVAMALARG---------PARVLLLAFIGFFR-----AIPVLMLIFWTYFLMPV 87

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   +        P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT  + 
Sbjct: 88  LLHMDV-------PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQT 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  V   + N+       I L 
Sbjct: 141 VRYVLLPQAIRIMRPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPAPIFLF 200

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              IYL L   +      L ++    ++
Sbjct: 201 VALIYLVLCTSLDGGARWLLSRGPRTQR 228


>gi|218507341|ref|ZP_03505219.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 157

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 5/157 (3%)

Query: 245 HFDKPVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
               P+L Q   I             ++++   ++ + +A++ EI RS ++A+P+GQ EA
Sbjct: 1   FQGTPMLMQLFVIYYGLPLIGITVNAWIAVAAGVTLHASAYLGEIWRSTIMALPKGQDEA 60

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALGL +R     V+LPQA+R  +P      + L+K +SLA  +GF +L   G  + N 
Sbjct: 61  AKALGLGYRTRIIYVILPQALRISLPSTVGFLVQLVKGTSLAAIIGFTELTRAGQIVSNA 120

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           T Q + +  +   +Y +L   ++ F  +L  + A   
Sbjct: 121 TYQPLIVFGLVGALYFALCWPLSHFSFQLEKRFASAR 157


>gi|213052443|ref|ZP_03345321.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
          Length = 187

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 11/184 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
            + +  + +PL+         +P L+   L      +     QF           F+S  
Sbjct: 8   LYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNIQF-----------FLSSM 56

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+
Sbjct: 57  ICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSE 116

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M+ +  
Sbjct: 117 MMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMSLVER 176

Query: 391 KIAL 394
           K+ L
Sbjct: 177 KVRL 180


>gi|21221279|ref|NP_627058.1| amino acid ABC transporter transmembrane protein [Streptomyces
           coelicolor A3(2)]
 gi|256787536|ref|ZP_05525967.1| amino acid ABC transporter transmembrane protein [Streptomyces
           lividans TK24]
 gi|289771431|ref|ZP_06530809.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           lividans TK24]
 gi|6689162|emb|CAB65559.1| probable amino acid ABC transporter protein, integral membrane
           component [Streptomyces coelicolor A3(2)]
 gi|289701630|gb|EFD69059.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           lividans TK24]
          Length = 233

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 92/223 (41%), Gaps = 13/223 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +         +    ++  FS +L   +S     ++R       + L   Y   F   
Sbjct: 1   MTSGLWELVLQGVWVTVQLLFFSSLLATAVSFVVG-IARSHRLWIVRFLAGFYTEVF--R 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G   LV+I   + + F  P    +  +          +  +AL     A+ +EIVR  L 
Sbjct: 58  GTSALVMI---FWVFFVLPPAFGWQLV-------PMWAGTLALGLTYGAYGSEIVRGSLA 107

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV   Q E  IAL  T  +  +L+LLPQA+  +IPP ++  + LLK ++L   +G  DL 
Sbjct: 108 AVDPAQKEGGIALSFTPWQRMKLILLPQAVPEMIPPFSNLLIELLKGTALVSIMGMGDLA 167

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                +     ++ EI    + IY  ++ ++   M  L  K+ 
Sbjct: 168 FSANLVRLALQESAEIYTYVLLIYFVIAFLLTRVMRGLEKKLK 210



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 33/79 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L F   + AT +  +VG  R     +V ++   Y EVFR    LV+I
Sbjct: 6   WELVLQGVWVTVQLLFFSSLLATAVSFVVGIARSHRLWIVRFLAGFYTEVFRGTSALVMI 65

Query: 146 FFLYKSVLSVLPIPDHSIV 164
           F+++  +          + 
Sbjct: 66  FWVFFVLPPAFGWQLVPMW 84


>gi|300811765|ref|ZP_07092238.1| putative arginine ABC transporter, permease protein ArtQ
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|313124503|ref|YP_004034762.1| glutamine ABC transporter permease component [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|300497264|gb|EFK32313.1| putative arginine ABC transporter, permease protein ArtQ
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|312281066|gb|ADQ61785.1| Glutamine ABC transporter permease component [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 213

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 19/232 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + M +     S   +T+    +  +FS  LGI++S   +  SR    K      LL  
Sbjct: 1   MKYVMEILPSLFSGAGMTLQIFFETLIFSLPLGILVSFGLS--SRFAPLKW-----LLNF 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +L+ G P L+ +   +   +  P++            P +M+  +A      A+ AEI
Sbjct: 54  YVWLMRGTPLLLQLIFVF---YGLPIV--------GLTFPRYMAALVAFVLNYTAYFAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G  A+ RGQ EAA  L LT+ +  R +++PQ ++ ++P + ++ +NL+K+SSL   +
Sbjct: 103 FRGGNQAIDRGQFEAAKVLQLTYGQTLRKIVIPQVIKIVLPSIGNEVINLVKDSSLVYVI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  DL+  G     +    +  +++   IYL L  +  L + +L    +   
Sbjct: 163 GLGDLLRAGNLATARD-VTLVPLVLVALIYLLLIGLCTLLLRQLEKHYSYYR 213



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  + F  +I +  +G LV  G  S    + W+   YV + R  P L+ + F+
Sbjct: 11  LFSGAGMTLQIFFETLIFSLPLGILVSFGLSSRFAPLKWLLNFYVWLMRGTPLLLQLIFV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  V       +       LN              A 
Sbjct: 71  FYGLPIVGLTFPRYMAALVAFVLNYTAYFAEIFRGGNQAI 110


>gi|291530248|emb|CBK95833.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Eubacterium siraeum 70/3]
          Length = 219

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 +FS ++G+V ++        +     + +  +YI   +    P LV +   Y  
Sbjct: 23  LGVLGIIFSIIIGLVCAVVQY-----YKVPVIRRIVSVYIE--ISRNTPLLVQLFFIYY- 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                             +         L+    +++AE  RSGL +V + Q E+A +LG
Sbjct: 75  ----------GLPKVGIPTDAETCGIAGLAFLGGSYMAEAFRSGLESVDKIQTESAYSLG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +A R V+LPQAM   IP   +  + L+K +S+  A+   DL+ +   ++       
Sbjct: 125 MNKMQAMRYVILPQAMSVSIPAFVANVIFLMKETSVFSAISLLDLMFMAKDLMGMYNDTT 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           E + + +  YL + + I++    +  ++  
Sbjct: 185 EALCLLVGFYLIILLPISIVGTIVERRVRR 214



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 34/78 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y        + T  L   G+I + IIG +    +     ++  I  VY+E+ RN P LV 
Sbjct: 9   YLPLFGEAALLTVKLGVLGIIFSIIIGLVCAVVQYYKVPVIRRIVSVYIEISRNTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHS 162
           +FF+Y  +  V    D  
Sbjct: 69  LFFIYYGLPKVGIPTDAE 86


>gi|239814893|ref|YP_002943803.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239801470|gb|ACS18537.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 273

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 11/222 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +  N +I V +  LG +  L    +S     +  +     Y+  F    +
Sbjct: 56  WTWLPALLRGLLANIEISVLAMALGTLAGLLVGAVS-LSPLRVLRVAARWYVQVFRNAPV 114

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LV     Y   +  P   + + +  +   P+++ + + L+   +A +AEI R  + ++
Sbjct: 115 LVLV-----YFTTYVFPF--ELHLVSWTFPFPDWIKVVLGLALPASANVAEIFRGAIQSI 167

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q EAA +L     +  RL++LPQ +R ++PP  + Y ++  +++LA  VG  D+V  
Sbjct: 168 PSAQWEAAQSLAFRRSEIFRLIVLPQCLRRMLPPWMNLYASITMSTALASLVGVHDVVDT 227

Query: 353 GGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                N   +T   I +    + ++ +    IA     L  +
Sbjct: 228 AQIASNTVARTDFTILVYFTLLGLFFACCYPIARATRALERR 269



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 43/97 (44%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
                 +    ++  A+L G +    ++   M   T+ G LVGA  LS  +++    R Y
Sbjct: 46  GTTPTAFVHLWTWLPALLRGLLANIEISVLAMALGTLAGLLVGAVSLSPLRVLRVAARWY 105

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V+VFRN P LV+++F        L +   +   P  +
Sbjct: 106 VQVFRNAPVLVLVYFTTYVFPFELHLVSWTFPFPDWI 142


>gi|315639021|ref|ZP_07894191.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
 gi|315480933|gb|EFU71567.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
          Length = 233

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 105/237 (44%), Gaps = 12/237 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTG 216
           +   F +      +    LT+  +    VFS ++G    L      +        + +  
Sbjct: 1   MDFHFILTHIPAFVEAAWLTLKLSFWGVVFSLIIGFFCVLMHFFKLKFMGNLCQIYIEFS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL + LP L      + L    P L         ++ P F    + LS  
Sbjct: 61  RNTPLLIQLFFLYYALPKL-----GFHLETIFP-LNLLCLSVDESLRPAFACAIVGLSFL 114

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AE +R+G  +V + Q EA ++LG +     R V+LPQA+   +  +++  + L+K
Sbjct: 115 GGAYMAEALRAGFESVKKQQFEAGLSLGFSAFGNLRYVILPQALAVAMSGISANIIFLIK 174

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +S+   +   DLV++  ++ + T +  E++ +    YL + + ++L ++ +  ++ 
Sbjct: 175 ETSVVSIIALPDLVTLMKSLNSLTYKTDELLFMLFMGYLCIILPLSLMLSFVEKRLR 231



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 39/83 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++  A +     T  L+F G++ + IIG           K +  +C++Y+E  RN P L+
Sbjct: 8   THIPAFVEAAWLTLKLSFWGVVFSLIIGFFCVLMHFFKLKFMGNLCQIYIEFSRNTPLLI 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLP 166
            +FFLY ++  +    +    L 
Sbjct: 68  QLFFLYYALPKLGFHLETIFPLN 90


>gi|310830297|ref|YP_003965397.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308753203|gb|ADO44346.1| polar amino acid ABC transporter, inner membrane subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 222

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 14/227 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           ++   + VLG+++S+    +++    +  + +  +Y
Sbjct: 1   MYQFNFRPVFDNLDMLFYGAWLTVQLSFSAMVLGLIVSILG-AVAKTSGGRVLRFIVDIY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +    I   P L+ I   Y           F             +  +AL     A+  E
Sbjct: 60  VEA--IRNTPFLIQIFFIY-----------FGLPAIGISMSPNTAALVALVINVGAYGTE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ +VP+GQ+EA  AL L   +  R V+L  A+R+I P LTSQ++ L+  SS+   
Sbjct: 107 IIRAGIESVPQGQVEAGRALALNKVQIFRYVILKPALRNIYPSLTSQFIYLMLTSSVVSI 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +   DL + G  +  +T    EI L    IY  L+   +     L  
Sbjct: 167 ISANDLAAAGADLSARTFANFEIYLALTIIYFLLAFGFSTLFGALRR 213



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 41/94 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +         +  G   T  L+FS M+   I+  L    + S  +++ +I  +YVE  RN
Sbjct: 6   FRPVFDNLDMLFYGAWLTVQLSFSAMVLGLIVSILGAVAKTSGGRVLRFIVDIYVEAIRN 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P L+ IFF+Y  + ++      +      + +N
Sbjct: 66  TPFLIQIFFIYFGLPAIGISMSPNTAALVALVIN 99


>gi|75675719|ref|YP_318140.1| amino acid ABC transporter, inner membrane component [Nitrobacter
           winogradskyi Nb-255]
 gi|74420589|gb|ABA04788.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Nitrobacter winogradskyi Nb-255]
          Length = 506

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 20/227 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +    V S  +GI L+L      R       +   + +I  +    L T 
Sbjct: 294 WGGLLVTLVVSVTGIVSSIPIGIALAL-----GRRSTLPLIRVFSIAFIEFWRGVPLIT- 347

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL    Y L           F+ G+      + + I ++ +  A+ AE++R GL AVP G
Sbjct: 348 VLFFATYMLPL---------FLPGNFTVDGLVRVLIGIALFAGAYNAEVIRGGLAAVPGG 398

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV--- 352
           Q EAA ALGL++ K T L+++PQA+R +IP L + ++ L K++SL   V   DL+ +   
Sbjct: 399 QAEAAHALGLSYWKTTGLIVMPQAVRHVIPGLVNSFIALFKDTSLVSIVALFDLLGILRA 458

Query: 353 --GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                                 IY +    I+ +   +  ++    +
Sbjct: 459 SFADPTWATPTTLFTGFAFTGLIYFAFCFSISRYSLFVEHRLNAHRR 505



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  ++ +G++ +  IG  +  GR S   L+      ++E +R +P + V+FF 
Sbjct: 293 LWGGLLVTLVVSVTGIVSSIPIGIALALGRRSTLPLIRVFSIAFIEFWRGVPLITVLFFA 352

Query: 149 YKSVLSVLP 157
              +   LP
Sbjct: 353 TYMLPLFLP 361


>gi|251790534|ref|YP_003005255.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247539155|gb|ACT07776.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 246

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             +S   +T+  +   ++ +F+LG +L +  T   R        + +  + +PL+     
Sbjct: 24  WIISGLQVTVSLSLCAWIIAFLLGSLLGILRTVPHRLLSGIGTCYVEMFRNVPLIVQFFS 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+   L      +     QF           F+S    L  +TAA + E VR+
Sbjct: 84  WYLVIPELLPAKLGMWFKAELDPNIQF-----------FLSSMFCLGMFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ  A +A+GLT  +  R VLLP A R I+PPLTS+ LNL+KNS++A  +G  
Sbjct: 133 GIQSLPRGQKAAGLAIGLTLPQTYRYVLLPNAYRVIVPPLTSEMLNLVKNSAIASTIGLM 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M  +  K  L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFSAITLAYVGINAIIMLLMQIVERKTRL 239



 Score = 64.6 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I+ G   T  L+    I A ++G+L+G 
Sbjct: 3   IDWNWGIFLQPAPFG----------NTTYLGWIISGLQVTVSLSLCAWIIAFLLGSLLGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   ++L++ I   YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPHRLLSGIGTCYVEMFRNVPLIVQFFSWYLVIPELLPAKLGMW 99


>gi|199597488|ref|ZP_03210917.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229552063|ref|ZP_04440788.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|258508265|ref|YP_003171016.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|258539477|ref|YP_003173976.1| amino acid ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|199591511|gb|EDY99588.1| ABC-type amino acid transport system, permease component
           [Lactobacillus rhamnosus HN001]
 gi|229314580|gb|EEN80553.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus rhamnosus LMS2-1]
 gi|257148192|emb|CAR87165.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|257151153|emb|CAR90125.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
 gi|259649583|dbj|BAI41745.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 218

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 14/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+   A   V +  LG++LS+      +    K GK+L   Y+  F   G P L
Sbjct: 12  LSGVKMTLGIFAITLVGAIPLGLILSVGLIPKPKSLLGKAGKSLLEGYVWVF--RGTPLL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V   F +  +A     AA+ AEI R G  A+  G
Sbjct: 70  LQLMFIF---YGLPII--------GIVFDRFSAALVAFILNYAAYFAEIFRGGFGAIDEG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+  L +T  +A R V++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 119 QFEASTVLNMTRWQALRFVVIPQVVKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGN- 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I +     +  +++   IYL L++++     R+ A  +   
Sbjct: 178 IASARDVTLLPLVLVGVIYLLLTLILTFLQKRIEAAFSYYR 218


>gi|161619872|ref|YP_001593759.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           canis ATCC 23365]
 gi|161336683|gb|ABX62988.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella canis ATCC 23365]
          Length = 281

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 14/261 (5%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR   P      +   + +   I      + F +             + TN  I + + +
Sbjct: 34  FRRTCPSGSPVSVTARMTNHPTITSKETTMDFSVSALGGAFPQLLPAIGTNLVISIIAMI 93

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           L ++     T L R        A+  + IS   I G P LV I L Y   +  P L    
Sbjct: 94  LALIGGTALTIL-RTLGIAPLNAVIGVVISF--IRGTPILVQIFLFY---YGLPAL---- 143

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G  +SP   +  +A++  ++ FI EI+R GL  +  G +EAAIALG+  +     V+
Sbjct: 144 ---GLDLSP-IQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWTKVI 199

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ    I+PPL ++   ++K ++L   +   +++     + N + + +E +L    I  
Sbjct: 200 LPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETLLCAAIILF 259

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           +++++++     L  + A + 
Sbjct: 260 AVNLVLSQCGRVLEMRFAARR 280



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 8/191 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L        ++   MI A I GT +   R      +  +  V +   R  P LV IF  
Sbjct: 77  LLPAIGTNLVISIIAMILALIGGTALTILRTLGIAPLNAVIGVVISFIRGTPILVQIFLF 136

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT---NAKIFVFSFVLGIVLSLFAT 205
           Y  + ++             +  N+       +       ++     +  LGI   +  T
Sbjct: 137 YYGLPALGLDLSPIQAGILAIAFNSSIFITEIMRGGLSGMDSGPVEAAIALGIKGKVIWT 196

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           ++     +   + +P L      I     L+ +    ++      +   +F    T+   
Sbjct: 197 KV--ILPQLYIRIMPPLVNELTTIVKGTALLSVITVVEVLRTAQQVANASFRPLETL--- 251

Query: 266 FMSLYIALSCY 276
             +  I  +  
Sbjct: 252 LCAAIILFAVN 262


>gi|152969251|ref|YP_001334360.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206577704|ref|YP_002239697.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Klebsiella pneumoniae 342]
 gi|238893715|ref|YP_002918449.1| glutamate/aspartate transport system permease [Klebsiella
           pneumoniae NTUH-K2044]
 gi|288936539|ref|YP_003440598.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510405|ref|ZP_06549775.1| glutamate/aspartate transport system permease [Klebsiella sp.
           1_1_55]
 gi|330005984|ref|ZP_08305450.1| putative ATP synthase F0, A subunit [Klebsiella sp. MS 92-3]
 gi|150954100|gb|ABR76130.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566762|gb|ACI08538.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Klebsiella pneumoniae 342]
 gi|238546031|dbj|BAH62382.1| glutamate/aspartate transport system permease [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|288891248|gb|ADC59566.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777121|gb|EFD85119.1| glutamate/aspartate transport system permease [Klebsiella sp.
           1_1_55]
 gi|328536021|gb|EGF62429.1| putative ATP synthase F0, A subunit [Klebsiella sp. MS 92-3]
          Length = 246

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 10/242 (4%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                     PFG       L          +   ++ +F++G +  +      R    +
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWSGFQITVALSISAWIIAFLVGSLFGIL-----RTVPNR 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               +   Y+  F    +P +V     Y +   F    +G +           F+S  + 
Sbjct: 60  FLSGIGTCYVELF--RNVPLIVQFFTWYLVVPEFLPENIGMWFKSELDPNIQFFVSSMLC 117

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+TS+ +
Sbjct: 118 LGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMM 177

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NL+KNS++A  +G AD+ +  G +++ +  A E        Y+ ++ +I L M  +  K+
Sbjct: 178 NLVKNSAIASTIGLADMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLIMYVVERKV 237

Query: 393 AL 394
            L
Sbjct: 238 RL 239



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 66/182 (36%), Gaps = 17/182 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ S  I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWSGFQITVALSISAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            R   N+ ++ I   YVE+FRN+P +V  F  Y  V   LP       +           
Sbjct: 53  LRTVPNRFLSGIGTCYVELFRNVPLIVQFFTWYLVVPEFLPE-----NIGMWFKSELDPN 107

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               ++      +F  + V   V +      R  ++     G  LP  Y    L      
Sbjct: 108 IQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRV 167

Query: 235 LV 236
           +V
Sbjct: 168 IV 169


>gi|326692920|ref|ZP_08229925.1| ABC-type amino acid transport system, permease component
           [Leuconostoc argentinum KCTC 3773]
          Length = 219

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 19/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+  +    + S + G ++ +       +F +  G           +   +
Sbjct: 16  MYLLGGLGITVGVSLISVILSLIFGSIVGIIQFERIPYFSKFVG----------TINNVI 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + + ++F  P +              F +  IA+S + +A +AEIVR GL +V
Sbjct: 66  RNLPLLLIIFFVYFALPKI--------GIHLSVFWATIIAMSTFESAMLAEIVRGGLESV 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ E A A GL++ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  A+L+  
Sbjct: 118 DIGQFEGARANGLSNMQTMIYIILPQAYKKMIPPIISQLISLVKDTSLAMGIVLAELMYR 177

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +  Q     I ++++   +Y  L+  ++L     + K+A
Sbjct: 178 GQIVYAQNSTYIIPVLIVITLVYFVLNYGLSLVARWADRKLA 219



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  ++   +I + I G++VG  +       +        V RN+P L++IF
Sbjct: 16  MYLLGGLGITVGVSLISVILSLIFGSIVGIIQFERIPYFSKFVGTINNVIRNLPLLLIIF 75

Query: 147 FLYKSVLSVLPIPDHSI 163
           F+Y ++  +        
Sbjct: 76  FVYFALPKIGIHLSVFW 92


>gi|260430204|ref|ZP_05784178.1| ABC transporter permease protein [Citreicella sp. SE45]
 gi|260418676|gb|EEX11932.1| ABC transporter permease protein [Citreicella sp. SE45]
          Length = 221

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 8/204 (3%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
             LG++ ++    +S       G  L ++ +ST     +P+LV I          P++  
Sbjct: 17  LALGLLNTVKIAAVSIVLGVLVGLVLAMMRLSTRRWLNIPSLVFIEFYRNTP---PIVHF 73

Query: 254 FNFIGGSTVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
           F F     V        +++  +ALS  + AF AE+ R G++++ RGQ E   ALG+TH 
Sbjct: 74  FWFFYALPVMLAVSLDPYVAAVLALSTQSGAFYAEVFRGGIVSIERGQWEGGRALGMTHS 133

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R V++PQA+  ++PP   +   LLK ++LA  + +ADL+     +  +T + +E+  
Sbjct: 134 ALMRRVIVPQAIARMVPPFIERSFELLKTTALASTLAYADLLYQAMMVNAETFRPLEVYT 193

Query: 369 IWMFIYLSLSIMIALFMNRLNAKI 392
               +YL L +  + F     A++
Sbjct: 194 TIALMYLVLLVTASQFARLAEARL 217



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 4/186 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + +G +NT  +A   ++   ++G ++   RLS  + +     V++E +RN PP+V  F+ 
Sbjct: 17  LALGLLNTVKIAAVSIVLGVLVGLVLAMMRLSTRRWLNIPSLVFIEFYRNTPPIVHFFWF 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  +L +     V          G  +  +       I    +  G  L +  + L 
Sbjct: 77  FYALPVMLAVSLDPYVAAVLALSTQSGAFYAEVFRGGIVSIERGQWEGGRALGMTHSALM 136

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       +A+  + +  F+      L   AL   L +   +L Q   +   T  P  + 
Sbjct: 137 RR--VIVPQAIARM-VPPFIERSFELLKTTALASTLAY-ADLLYQAMMVNAETFRPLEVY 192

Query: 269 LYIALS 274
             IAL 
Sbjct: 193 TTIALM 198


>gi|238028318|ref|YP_002912549.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           glumae BGR1]
 gi|237877512|gb|ACR29845.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           glumae BGR1]
          Length = 237

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 85/214 (39%), Gaps = 4/214 (1%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           +    +     + V S  LG  LS+     +R    K       LY  T++  G P  V 
Sbjct: 18  YHITGVAITLWLLVVSIGLGFCLSVPL-ACARVSKRKWLAGAVWLY--TYVFRGTPLYVQ 74

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           + L Y   +    +     +             +A +  T A+  EI    + A   G++
Sbjct: 75  LLLCYTGLYSLQAVRGTPLL-NEFFRDGMHCTLLAFTLNTCAYTTEIFAGAIKATAYGEI 133

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA A G++     R V+LP A+R  +P  +++ + +L  +++A      D++ +   + 
Sbjct: 134 EAARAYGMSTFTLYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVPDILKIARDVN 193

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + T  +     I   +YL++S  +     +   +
Sbjct: 194 SATYMSFHAFGIAALLYLAISFTLVWLFRQAERR 227



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I +    Y     Y    + G   T WL    +     +   +   R+S  K +A    +
Sbjct: 5   IQEYWRNYLYTDGY---HITGVAITLWLLVVSIGLGFCLSVPLACARVSKRKWLAGAVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  +    ++  F     +  L   TL          
Sbjct: 62  YTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPLLNEFFRDGMHCTLLAFTLNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|328886198|emb|CCA59437.1| glutamate permease [Streptomyces venezuelae ATCC 10712]
          Length = 285

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 56/254 (22%), Positives = 101/254 (39%), Gaps = 26/254 (10%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L +  ++   +                  +    L     T+   A   V S  LG VL
Sbjct: 30  ILALAGWILYLLFDNDQFTSTKWSPFLYQGIQELLLEGLGNTLKAFAYAAVLSLALGAVL 89

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +       R    +  + +  L +  F                     PVL    FI  +
Sbjct: 90  AT-----GRLSEHRALRWISTLLVEFFR------------------AMPVLVMIFFIFVA 126

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +L   L+ Y  + +AE+ R+G+ AV RGQ EAA ALG+   +    VL PQA+
Sbjct: 127 LKVQALPALVAGLTLYNGSVLAEVFRTGIHAVARGQGEAAYALGMRKTQVMTYVLAPQAV 186

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSL 377
           R+++P + SQ +  LK++SL   + + + +  G  I +        I ++L+   IY+ +
Sbjct: 187 RAMLPAIISQLVVALKDTSLGFLITYEEFLHAGKLIASNLDYDLPFIPVVLVISPIYIGM 246

Query: 378 SIMIALFMNRLNAK 391
            ++++ F   +  +
Sbjct: 247 CMLLSWFATWVARR 260



 Score = 53.8 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 58/131 (44%), Gaps = 18/131 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  ++   +   +++  +  W +  +++N + ++             ++  Q +     
Sbjct: 15  ARRRHLLYGLASTVVILALAGWILYLLFDNDQFTSTK------WSPFLYQGIQEL----- 63

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G  NT        + +  +G ++  GRLS ++ + WI  + VE FR +P 
Sbjct: 64  -------LLEGLGNTLKAFAYAAVLSLALGAVLATGRLSEHRALRWISTLLVEFFRAMPV 116

Query: 142 LVVIFFLYKSV 152
           LV+IFF++ ++
Sbjct: 117 LVMIFFIFVAL 127


>gi|262041259|ref|ZP_06014470.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259041375|gb|EEW42435.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 246

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 10/242 (4%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                     PFG       L          +   ++ +F++G +  +      R    +
Sbjct: 5   WNWGIFLQQAPFGNTTYLGWLWGGFQITVALSISAWIIAFLVGSLFGIL-----RTVPNR 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               +   Y+  F    +P +V     Y +   F    +G +           F+S  + 
Sbjct: 60  FLSGIGTCYVELF--RNVPLIVQFFTWYLVVPEFLPENIGMWFKSELDPNIQFFVSSMLC 117

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  +TAA + E VR+ + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+TS+ +
Sbjct: 118 LGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVIVPPMTSEMM 177

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           NL+KNS++A  +G AD+ +  G +++ +  A E        Y+ ++ +I L M  +  K+
Sbjct: 178 NLVKNSAIASTIGLADMAAQAGKLLDYSAHAWESFTAITLAYVFINAVIMLIMYVVERKV 237

Query: 393 AL 394
            L
Sbjct: 238 RL 239



 Score = 58.8 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 66/182 (36%), Gaps = 17/182 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   +  GF  T  L+ S  I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWLWGGFQITVALSISAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            R   N+ ++ I   YVE+FRN+P +V  F  Y  V   LP       +           
Sbjct: 53  LRTVPNRFLSGIGTCYVELFRNVPLIVQFFTWYLVVPEFLPE-----NIGMWFKSELDPN 107

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
               ++      +F  + V   V +      R  ++     G  LP  Y    L      
Sbjct: 108 IQFFVSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRV 167

Query: 235 LV 236
           +V
Sbjct: 168 IV 169


>gi|227356756|ref|ZP_03841141.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Proteus mirabilis ATCC 29906]
 gi|227163046|gb|EEI47981.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Proteus mirabilis ATCC 29906]
          Length = 222

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 95/227 (41%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +      + T+  +   + ++   LS+  T +      K     P++ +   L  G
Sbjct: 1   MWDYIVDILPGLPTSLSLTFVALLVAFTLSVLMTFI---LALKVPVISPIVKVYITLFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   L Y      P L ++  +     +P F    + L+  +AA+   +    + A
Sbjct: 58  TPLLVQFFLIYYGPGQFPSLKEYPLLWELLSTPWF-CAMVTLALNSAAYSTLLFHGAVRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++  +    V+LP A +  +   +++ + + K++SLA  +   +L  
Sbjct: 117 IPAGQWQSCQALGMSPLQT-ANVILPYAFKRALSSYSNEVVLIFKSTSLASTITLLELTG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  Q    + + +    IYL+++ ++ L M  +  K    E +
Sbjct: 176 YSRQVFGQNYDVM-VFVAAGIIYLAINGILTLLMRLIEKKALAFEHR 221



 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 40/119 (33%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   +  L F  ++ A  +  L+         +++ I +VY+ +F   P L
Sbjct: 2   WDYIVDILPGLPTSLSLTFVALLVAFTLSVLMTFILALKVPVISPIVKVYITLFTGTPLL 61

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           V  F +Y        + ++ ++           +    L     + +     V  I   
Sbjct: 62  VQFFLIYYGPGQFPSLKEYPLLWELLSTPWFCAMVTLALNSAAYSTLLFHGAVRAIPAG 120


>gi|104784170|ref|YP_610668.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95113157|emb|CAK17885.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 219

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 17/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   +F+ + G++  +  T  +R  +        LL +   L   +P LV + L +   F
Sbjct: 28  ALGILFATLGGVLYGVLTTLGNRALNL-------LLQVYLELFRAIPVLVWLYLVF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + L  + A+ + E+VR  L ++PRGQ EA +++GL 
Sbjct: 78  GLPIFFGLSI-------PSFWCAVLVLGLWGASEVGEVVRGALQSLPRGQREAGLSIGLG 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP  + Y  ++K SSLAV +G  D++ VG  II +T +++ I
Sbjct: 131 GWQLYGYVLLPQALKRMTPPTINIYTRIIKTSSLAVLIGVVDVIKVGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  +  +   ++     L  + A
Sbjct: 191 YGALFLFFFLVCYPLSAASRVLERRWA 217



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++  G++ AT+ G L G      N+ +  + +VY+E+FR IP LV ++ +
Sbjct: 16  LAAGAAQTLTISALGILFATLGGVLYGVLTTLGNRALNLLLQVYLELFRAIPVLVWLYLV 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|309804200|ref|ZP_07698277.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 11V1-d]
 gi|309805504|ref|ZP_07699549.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 09V1-c]
 gi|309808678|ref|ZP_07702570.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 01V1-a]
 gi|312871462|ref|ZP_07731556.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 3008A-a]
 gi|312872438|ref|ZP_07732507.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2062A-h1]
 gi|312874450|ref|ZP_07734480.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2052A-d]
 gi|312874526|ref|ZP_07734551.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2053A-b]
 gi|315653363|ref|ZP_07906285.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|325911895|ref|ZP_08174299.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners UPII 143-D]
 gi|325913433|ref|ZP_08175799.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners UPII 60-B]
 gi|329920206|ref|ZP_08277018.1| putative glutamine ABC transporter permease protein GlnM
           [Lactobacillus iners SPIN 1401G]
 gi|308163603|gb|EFO65873.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 11V1-d]
 gi|308165155|gb|EFO67393.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 09V1-c]
 gi|308168152|gb|EFO70278.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LactinV 01V1-a]
 gi|311089917|gb|EFQ48336.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2053A-b]
 gi|311090062|gb|EFQ48476.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2052A-d]
 gi|311092020|gb|EFQ50395.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 2062A-h1]
 gi|311092982|gb|EFQ51332.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners LEAF 3008A-a]
 gi|315489288|gb|EFU78928.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus iners ATCC 55195]
 gi|325476401|gb|EGC79563.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners UPII 143-D]
 gi|325477202|gb|EGC80348.1| putative glutamine ABC transporter, permease protein GlnM
           [Lactobacillus iners UPII 60-B]
 gi|328936427|gb|EGG32873.1| putative glutamine ABC transporter permease protein GlnM
           [Lactobacillus iners SPIN 1401G]
          Length = 212

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + +   + T+  +     FS ++G++ +L      R  H      +  +Y+  F   
Sbjct: 8   HWPQFMQGLSSTIMCSLIAIFFSLIIGVICALVEVSPCRIPHL-----IARIYVEIFRNI 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  +V+I      +   P +              F +  IAL+ YT+AFI+E V+SG+ 
Sbjct: 63  PLLIIVMIF-----YLVVPQM--------GLKLTGFGAGTIALTLYTSAFISETVKSGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQME A + G+++ +A R V+LPQA++ +IPPL +Q+++L+KNSS+   V   DL+
Sbjct: 110 SIGIGQMEGARSNGMSYVQAMRYVVLPQALKVVIPPLGNQFISLIKNSSVLAFVAGFDLM 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I   + + +   ++   +YL L++ ++ +M  L  K+A
Sbjct: 170 YQADVISLASFETVNTYVVVGLLYLVLTLPLSYYMRYLEEKLA 212



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++    + G  +T   +   +  + IIG +     +S  ++   I R+YVE+FRNIP L+
Sbjct: 7   NHWPQFMQGLSSTIMCSLIAIFFSLIIGVICALVEVSPCRIPHLIARIYVEIFRNIPLLI 66

Query: 144 VIFFLYKSVLSV 155
           ++   Y  V  +
Sbjct: 67  IVMIFYLVVPQM 78


>gi|221212964|ref|ZP_03585940.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
 gi|221167177|gb|EED99647.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
          Length = 250

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 9/236 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLY 223
           + F +  +N          D        S VL I  ++ +  L          A  P   
Sbjct: 1   MDFSLLFSNLPYLLVGAFPDGPLGGAALSLVLAIASAVASAALGVGLGVAMALARGPARA 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +    I     + ++ L +  +F  P+L         T  P   S+  AL+    A++A 
Sbjct: 61  LLLAFIGFFRAIPVLMLIFWTYFLMPIL-------LHTDVPGLASVVCALALVGGAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++SLA  
Sbjct: 114 AVHAGIVAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVALVKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG  +L  V   + N+       I L    IYL +   +      L ++   +  +
Sbjct: 174 VGVPELSFVATQVNNRLMVYPAPIFLFVAAIYLIMCTSLDGAARWLLSRAPRERGR 229


>gi|297194203|ref|ZP_06911601.1| amino acid ABC transporter transmembrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722542|gb|EDY66450.1| amino acid ABC transporter transmembrane protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 251

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 12/187 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R    +  + +  +Y   F   G   LVL+   + L F  P L  +  +          
Sbjct: 38  ARTHRSRAVRFVAGVYTEIF--RGTSALVLM---FWLFFVVPPLMGWQLV-------PMW 85

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +AL     A+ AEIVR  L +V   Q EA IAL  T  +  RL+LLPQA+  ++P  
Sbjct: 86  AAVLALGLSYGAYGAEIVRGALNSVAVSQREAGIALSFTPWQRLRLILLPQAVPEMVPSF 145

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  + LLK ++L   +G  D+      +   T ++ +I  I + IY  L+  +   M  
Sbjct: 146 CNLLIELLKGTALVSLLGVGDVSFAAYLVRLATQESAQIYTISLVIYFVLAFALTRSMKA 205

Query: 388 LNAKIAL 394
           L  +   
Sbjct: 206 LERRTKR 212



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L       A  +   VG  R   ++ V ++  VY E+FR    LV+
Sbjct: 6   WQNWVLPGIWITVQLLVYSAALAAAVAFTVGTARTHRSRAVRFVAGVYTEIFRGTSALVL 65

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +F+L+  V  ++      + 
Sbjct: 66  MFWLFFVVPPLMGWQLVPMW 85


>gi|167739494|ref|ZP_02412268.1| histidine transport system permease protein [Burkholderia
           pseudomallei 14]
          Length = 194

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 3/186 (1%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            ++R    +        Y  T++  G P  V + L Y   +    + +  ++  +     
Sbjct: 2   AVARVSKNRWLSTPVRFY--TYVFRGTPLYVQLLLLYTGMYSLAFVREHAWLD-AFFRSG 58

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    +A +  T A+  EI    + A+  G++EAA A G++     R V+LP ++R  +P
Sbjct: 59  FHCAILAFALNTCAYTTEIFAGAIRAIAHGEVEAARAYGMSPFTMYRRVILPSSLRRALP 118

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             +++ + +L  +++A      D++ V     + T  A +   I   IYL++S  +    
Sbjct: 119 LYSNEVILMLHATTVAFTATVPDILKVARDANSATYMAFQSFGIAALIYLAVSFALVAAF 178

Query: 386 NRLNAK 391
            R    
Sbjct: 179 RRAERH 184


>gi|295400466|ref|ZP_06810444.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312112429|ref|YP_003990745.1| polar amino acid ABC transporter inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
 gi|294977369|gb|EFG52969.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311217530|gb|ADP76134.1| polar amino acid ABC transporter, inner membrane subunit
           [Geobacillus sp. Y4.1MC1]
          Length = 236

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 104/228 (45%), Gaps = 7/228 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +PF        +    +TM          F +G+V++L      R +  K   A+   Y+
Sbjct: 5   IPFMWTAFKEIIKALPVTMMLTLIPLFVGFFIGLVVALI-----RVYKVKGLLAIANGYV 59

Query: 225 STFLIFGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S      +   ++LI   + L  D  V  +      + + P    +  ALS    A+++E
Sbjct: 60  SFLRGTPIIMHVMLIYFGFPLLIDA-VAAKLGISVQTQLIPISTFVLTALSLSAGAYLSE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++RSG++++P+GQ+EAA ++G+   +    ++LPQA+   IP  T+ ++  L  SS+A  
Sbjct: 119 VIRSGILSIPKGQVEAAYSVGMNTFQTMVRIILPQALAQSIPNFTNIFVGFLHTSSIAFL 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           V   +L      + +   + +E  +    IY  ++I++    + +  +
Sbjct: 179 VSQKELTGAANIVASTNLKFLEAYIAAGIIYWLVTILVEGLSSLVEKR 226


>gi|116254799|ref|YP_770635.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259447|emb|CAK10585.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 228

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V S ++G  +++  + +     ++       ++IS F   G+P LV + L Y L  
Sbjct: 32  VTISVVSILIGFAIAIVVSAML-LSRQRLLALQARIFISFF--RGVPLLVQLLLIYNL-- 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P  ++  I LS  TAA+ AE +R G  +VP G +E+A  +G+T
Sbjct: 87  ---------LPAIGINVPSIVAAIIGLSLCTAAYQAENLRGGFSSVPAGLVESAEMVGMT 137

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +  P A+R   P L ++ + +LK SSL   VG  +L  +   +   T   +EI
Sbjct: 138 PVQIFRRIKAPIALRLTFPALVNEAILILKASSLVSVVGVIELTRMAQDLAGSTFLPLEI 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                 IYL ++ ++AL    +   +
Sbjct: 198 FASAGLIYLVINWIVALAGGLVERSL 223



 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 4/195 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  ++   ++    I  +V A  LS  +L+A   R+++  FR +P LV +  +
Sbjct: 24  LLQAAIYTVTISVVSILIGFAIAIVVSAMLLSRQRLLALQARIFISFFRGVPLLVQLLLI 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  + ++       +    G+ L         L    ++          +V         
Sbjct: 84  YNLLPAIGINVPSIVAAIIGLSLCTAAYQAENLRGGFSSVPAGLVESAEMVGMTPVQIFR 143

Query: 209 RHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R       +   P L     LI    +LV +    +L      L    F+     +    
Sbjct: 144 RIKAPIALRLTFPALVNEAILILKASSLVSVVGVIELTRMAQDLAGSTFLPLEIFAS--- 200

Query: 268 SLYIALSCYTAAFIA 282
           +  I L       +A
Sbjct: 201 AGLIYLVINWIVALA 215


>gi|293193554|ref|ZP_06609824.1| amino acid ABC transporter, permease protein [Actinomyces
           odontolyticus F0309]
 gi|292819910|gb|EFF78912.1| amino acid ABC transporter, permease protein [Actinomyces
           odontolyticus F0309]
          Length = 225

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +    R L      +     I   S VL +VL +F     R       +  PL ++    
Sbjct: 8   VIFEGRNLVRILEGLGVTVGISALSVVLSLVLGVFVGLGMR------SRWRPLRWLMQIY 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +  +  +  + L +  +F    +   N  G         +  +  + +  A + ++VR  
Sbjct: 62  LEFVRIMPQLVLLFVAYFGLTRVAGINLDG-------ITASVLVFTLWGGAEMGDLVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           LIA+PR Q E+A ALGLT R+  R V+LPQ +R + PP  +    ++K +SL V +G  +
Sbjct: 115 LIAIPRHQYESAYALGLTPRQTMRRVILPQTLRRLAPPAVNLITRMIKTTSLVVLIGVVE 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           ++ VG  II+            I  +   +Y  +   I+L    +  
Sbjct: 175 VLKVGQQIIDANRFNYPTASLWIYGLIFALYFLICWPISLLSRHMEK 221



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 79/199 (39%), Gaps = 5/199 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + ++G  VG G  S  + + W+ ++Y+E  R +P LV++F  
Sbjct: 18  ILEGLGVTVGISALSVVLSLVLGVFVGLGMRSRWRPLRWLMQIYLEFVRIMPQLVLLFVA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRL 207
           Y  +  V  I    I     +F    G     L       I    +     L L     +
Sbjct: 78  YFGLTRVAGINLDGITASVLVFTLWGGAEMGDLVRGALIAIPRHQYESAYALGLTPRQTM 137

Query: 208 SRHFHEKTGKAL--PLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTVS 263
            R    +T + L  P + + T +I     +VLI +   L   + ++   +FN+   S   
Sbjct: 138 RRVILPQTLRRLAPPAVNLITRMIKTTSLVVLIGVVEVLKVGQQIIDANRFNYPTASLWI 197

Query: 264 PEFMSLYIALSCYTAAFIA 282
              +     L C+  + ++
Sbjct: 198 YGLIFALYFLICWPISLLS 216


>gi|218512654|ref|ZP_03509494.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 172

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 13/182 (7%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               L R       +    LYI  F     P L+ + + Y                    
Sbjct: 2   VMIALMRTSPYALPRWFAYLYIEVF--QATPLLMQLFVFYY-----------GVALVGLD 48

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              +++  I L+ +++AF+ EI R G+ AVP GQ EAA ALGL +R     V+LPQA + 
Sbjct: 49  VSAWIAAAIGLTAHSSAFLGEIWRGGIEAVPLGQTEAARALGLPYRHRMLDVVLPQAFKI 108

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P      + L+K +SL   +GF +L   G  I N T Q + +  +   IY +L   ++
Sbjct: 109 SLPATIGFLVGLVKGTSLVAIIGFTELTRAGQIISNNTFQPLIVFGMVGAIYFALCWPLS 168

Query: 383 LF 384
           L 
Sbjct: 169 LL 170


>gi|124486253|ref|YP_001030869.1| hypothetical protein Mlab_1437 [Methanocorpusculum labreanum Z]
 gi|124363794|gb|ABN07602.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanocorpusculum labreanum Z]
          Length = 228

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +  FS ++G +  +  T L + +  +  +    +Y+  F   GLP +VL+      
Sbjct: 21  VTLLLVGFSLLIGFICGIILT-LGQVYGPRPVRWFVGVYVWFF--RGLPNIVLLF----- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +     F   S   P F      L   +AA+ ++I R  + ++  GQM AA +LG
Sbjct: 73  -----LFYFALFPFMSWDMPVFGVAVTVLGLRSAAYQSQIFRGAIQSLSEGQMLAARSLG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +A R ++LPQ++R  +P  +++Y  LL +S++A  +G A+L++    +I++TG+ +
Sbjct: 128 MTKWQAIRSIILPQSLRLSLPGWSNEYPVLLTDSAVAYVIGVAELLTRTSQVISRTGEPM 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + L    I++ L+    + +  +  K+ +
Sbjct: 188 LLYLTCAVIFILLNYGGMMIIQYIEKKVRI 217



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  L    ++   I G ++  G++   + V W   VYV  FR +P +V++F 
Sbjct: 14  YLLGGVGVTLLLVGFSLLIGFICGIILTLGQVYGPRPVRWFVGVYVWFFRGLPNIVLLFL 73

Query: 148 LYKSVLSVLPI 158
            Y ++   +  
Sbjct: 74  FYFALFPFMSW 84


>gi|326382187|ref|ZP_08203879.1| ABC amino acid transporter, permease component [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326198917|gb|EGD56099.1| ABC amino acid transporter, permease component [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 214

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 95/228 (41%), Gaps = 16/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTF 227
           +  + +        +    KI + + V+G ++++    +         + L + ++ +T 
Sbjct: 2   IDWSWQRAEDALPVLWDGFKITLLATVIGFLVAMILGLVVAVIRRSGPRWLAIPVHAATE 61

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +   P +V +   Y L      L QF                  L  + A+++AE+ R+
Sbjct: 62  FVRLTPIVVQLLFVYAL------LPQF---------TPLTIGIAVLGVHYASYMAEVYRA 106

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VP GQ EAA AL L   +  R V+LPQ  R+ +P L +  +++ K++     +   
Sbjct: 107 GIEEVPVGQWEAARALSLPGTRTWRAVILPQVARNSLPALGNNAVSMFKDTPYLFTISVV 166

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +LV+   T        +E   +    +L  S   ++ + RL   +A +
Sbjct: 167 ELVTAAQTYGAAHFAYLEAFTLAGAFFLVASYPTSVLIRRLERLLAHR 214



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  GF  T      G + A I+G +V   R S  + +A       E  R  P +V + F
Sbjct: 15  VLWDGFKITLLATVIGFLVAMILGLVVAVIRRSGPRWLAIPVHAATEFVRLTPIVVQLLF 74

Query: 148 LYKSVLSVLP 157
           +Y  +    P
Sbjct: 75  VYALLPQFTP 84


>gi|120403415|ref|YP_953244.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956233|gb|ABM13238.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 291

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 15/216 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
                 L     T+   A   V +  LG VL +   RLS H   +   +     +     
Sbjct: 59  LWRTYVLPGIEGTLTAAAVSIVLALALGFVLGV--GRLSTHTAIRWASS-----VFVEFF 111

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P L+++   Y L+    V          +       +   L+ Y  A IAEIVR+G+
Sbjct: 112 RAVPVLIMMIFAYFLYAFYDVFP--------SKHLALAGVITGLTLYNGAVIAEIVRAGV 163

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRGQ EAA ALGLT  +  R +LLPQA+ S++P L SQ + +LK+++L   + F ++
Sbjct: 164 HALPRGQTEAASALGLTWGQTMRSILLPQAITSMLPVLISQLVVVLKDTALGYQITFVEM 223

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           V  G  I +  G  I  +++   + ++L+  ++   
Sbjct: 224 VRQGTVIGSAYGNYIPALIVIALLMIALNFTLSWLA 259



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 72/208 (34%), Gaps = 7/208 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+ +   + T +L G   T   A   ++ A  +G ++G GRLS +  + W   V+VE FR
Sbjct: 53  PFLTADLWRTYVLPGIEGTLTAAAVSIVLALALGFVLGVGRLSTHTAIRWASSVFVEFFR 112

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---- 193
            +P L+++ F Y         P   + L  G+       +   +     A +        
Sbjct: 113 AVPVLIMMIFAYFLYAFYDVFPSKHLALA-GVITGLTLYNGAVIAEIVRAGVHALPRGQT 171

Query: 194 -FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVL 251
                + L+   T  S    +     LP+L     ++     L   I     +     + 
Sbjct: 172 EAASALGLTWGQTMRSILLPQAITSMLPVLISQLVVVLKDTALGYQITFVEMVRQGTVIG 231

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             +     + +    + + +  +    A
Sbjct: 232 SAYGNYIPALIVIALLMIALNFTLSWLA 259


>gi|15596086|ref|NP_249580.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PAO1]
 gi|107100347|ref|ZP_01364265.1| hypothetical protein PaerPA_01001372 [Pseudomonas aeruginosa PACS2]
 gi|116048813|ref|YP_792387.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218893142|ref|YP_002442011.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           LESB58]
 gi|254239242|ref|ZP_04932565.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           C3719]
 gi|254245176|ref|ZP_04938498.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           2192]
 gi|296390757|ref|ZP_06880232.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PAb1]
 gi|313105772|ref|ZP_07792035.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           39016]
 gi|9946789|gb|AAG04278.1|AE004523_6 arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           PAO1]
 gi|115584034|gb|ABJ10049.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126171173|gb|EAZ56684.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           C3719]
 gi|126198554|gb|EAZ62617.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           2192]
 gi|218773370|emb|CAW29182.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           LESB58]
 gi|310878537|gb|EFQ37131.1| arginine/ornithine transport protein AotQ [Pseudomonas aeruginosa
           39016]
          Length = 229

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S +L IVL L      R    +       LY    ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALLSMLLAIVLGLLGAAF-RLSPVRWLAWCGDLY--ATVVRGIPDLVLILLIFY 70

Query: 244 LHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                   V  Q  +     ++P F+S    L     A+++E  R   +A+P+GQ EA  
Sbjct: 71  GGQGLLNWVAPQLGYDDYIDLNP-FVSGVGTLGFIFGAYLSETFRGAFMAIPKGQGEAGY 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++HR+    + +PQ +R  IP  T+ +L L+K ++L   VG  D++       + T 
Sbjct: 130 AYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVGLQDMMFKAKQASDATR 189

Query: 362 QAIEIILIWMFIY 374
           +     L    +Y
Sbjct: 190 EPFTYYLAVAGLY 202



 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 40/90 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I+ G   T  LA   M+ A ++G L  A RLS  + +AW   +Y  V R IP LV+
Sbjct: 5   YGATIVDGAWLTLQLALLSMLLAIVLGLLGAAFRLSPVRWLAWCGDLYATVVRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           I  ++     +L      +     + LN  
Sbjct: 65  ILLIFYGGQGLLNWVAPQLGYDDYIDLNPF 94


>gi|319780067|ref|YP_004139543.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317165955|gb|ADV09493.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 269

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 13/251 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L    L ++      +   +       GL     ++   A   V  F+L + L L   
Sbjct: 23  IVLILIALGLVLSAAFFMRWDWLPQYYEMGLIGLWRSLWILAVTCVLGFLLAVPLGLAQA 82

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP- 264
             S  F            +   +I G P L+ + L Y       +  Q+ +I  S + P 
Sbjct: 83  AGSFWFAAPA-------KVFCTVIRGTPLLIQLWLLYYG--LGSLFPQYPWIRESWMWPY 133

Query: 265 ---EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +    +AL+   A +  E++R     VP+GQ+EAA A G++  KA R + LPQA+ 
Sbjct: 134 LRQAWPYGVLALTLSFAGYEGEVMRGAFAGVPKGQLEAARAFGMSRWKAFRRIWLPQAIY 193

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT + +  LK++ L   +   D+ +V   +   T    E +L+   IY++++ ++
Sbjct: 194 RALPTLTGETVLQLKSTPLVATISVIDIFAVSSKVRQDTYLTYEPLLLLALIYMTITGIL 253

Query: 382 ALFMNRLNAKI 392
               +R+ A+I
Sbjct: 254 VFAFSRIEARI 264



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 58/154 (37%), Gaps = 3/154 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L+G   + W+     +   ++   +G  + + +   A   +V+  V R  P L+
Sbjct: 47  QYYEMGLIGLWRSLWILAVTCVLGFLLAVPLGLAQAAGSFWFAAPAKVFCTVIRGTPLLI 106

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            ++ LY  + S+ P            +L  +   +  L +  +   +    + G    + 
Sbjct: 107 QLWLLYYGLGSLFPQYPWIRESWMWPYL-RQAWPYGVLALTLSFAGYEGEVMRGAFAGVP 165

Query: 204 ATRL--SRHFHEKTGKALPLLYISTFLIFGLPTL 235
             +L  +R F     KA   +++   +   LPTL
Sbjct: 166 KGQLEAARAFGMSRWKAFRRIWLPQAIYRALPTL 199


>gi|302560484|ref|ZP_07312826.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           griseoflavus Tu4000]
 gi|302478102|gb|EFL41195.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           griseoflavus Tu4000]
          Length = 233

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 13/223 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +         +    ++ V S +L   +S     ++R       + L   Y   F   
Sbjct: 1   MTSGLWELVLHGVWVTIQLLVLSSLLATAVSFVVG-VARTHRLWIVRFLAGFYTEVF--R 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G   LV+I   + + F  P    +  +          +  +AL     A+ AEIVR  L 
Sbjct: 58  GTSALVMI---FWVFFVLPPAFGWQLV-------PLWAGTLALGLTYGAYGAEIVRGALA 107

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV   Q E  IAL  T  +  +L+LLPQA+  +IPP ++  + LLK ++L   +G  DL 
Sbjct: 108 AVDPAQREGGIALSFTPWQRMKLILLPQAVPEMIPPFSNLLIELLKGTALVSIMGMGDLA 167

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  +     ++ EI    + IY  ++ ++   M  L  K+ 
Sbjct: 168 FSGNLVRLALQESAEIYTYILLIYFVIAFLLTRSMRGLEKKLK 210



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L     + AT +  +VG  R     +V ++   Y EVFR    LV+I
Sbjct: 6   WELVLHGVWVTIQLLVLSSLLATAVSFVVGVARTHRLWIVRFLAGFYTEVFRGTSALVMI 65

Query: 146 FFLYKSVLSVLPI 158
           F+++  +      
Sbjct: 66  FWVFFVLPPAFGW 78


>gi|218248365|ref|YP_002373736.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 8801]
 gi|218168843|gb|ACK67580.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 8801]
          Length = 401

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T     V SF  GI+L+L      R       + L + YI          L LI + +  
Sbjct: 205 TAIVSIVLSFPFGILLAL-----GRQSSLNVIRWLSIAYIEVIR-----GLPLIGILFMA 254

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P++     +   +     +      + ++AA++AE VR GL +VP+GQ+EAA ALG
Sbjct: 255 QIMLPLI-----LPVGSRPDRVIRAIAGFTLFSAAYLAENVRGGLQSVPKGQIEAAKALG 309

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TG 361
           L        ++LPQA++++IP +  Q+++L K++SL   VG  DL+ +  +I+      G
Sbjct: 310 LNPIFVLIFIVLPQALKAVIPSIVGQFISLFKDTSLLAIVGLVDLLGISQSILANPKFIG 369

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  E+ L    IY      ++    +L  K+
Sbjct: 370 RYGEVYLFIAVIYWIFCYSMSWASRKLEQKL 400



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 69/202 (34%), Gaps = 19/202 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T   A   ++ +   G L+  GR S+  ++ W+   Y+EV R +P + ++F   
Sbjct: 196 FSGLILTLLTAIVSIVLSFPFGILLALGRQSSLNVIRWLSIAYIEVIRGLPLIGILFMAQ 255

Query: 150 KSVLSVLPIPDHS------------IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             +  +LP+                    +       GL          AK    + +  
Sbjct: 256 IMLPLILPVGSRPDRVIRAIAGFTLFSAAYLAENVRGGLQSVPKGQIEAAKALGLNPIFV 315

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++  +    L        G+ + L             L ++ L   L   + +L    FI
Sbjct: 316 LIFIVLPQALKAVIPSIVGQFISL-------FKDTSLLAIVGLVDLLGISQSILANPKFI 368

Query: 258 GGSTVSPEFMSLYIALSCYTAA 279
           G       F+++   + CY+ +
Sbjct: 369 GRYGEVYLFIAVIYWIFCYSMS 390


>gi|119387801|ref|YP_918835.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378376|gb|ABL73139.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 222

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 14/227 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +  F        L           ++ + + VLG+++S+    +++    +  + L  +Y
Sbjct: 1   MYQFNFQPVFGNLDLLLYGAWLTVRLSLMAMVLGLIVSVLG-AVAKTSGIRPLRWLTDVY 59

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   +I   P LV I   +           F             +  +AL     A+  E
Sbjct: 60  VE--VIRNTPFLVQIFFIF-----------FGLPAAGISMSPNTAALVALVVNVGAYGTE 106

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R+G+ ++PRGQ+EA  ALGL+  +  R V++  A+R+I P LTSQ++ L+  SS+   
Sbjct: 107 IIRTGIESIPRGQIEAGRALGLSPVQIFRHVVMIPALRNIYPSLTSQFIYLMLTSSVVSI 166

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +   DL S G  +  +T  + EI L+   +Y  L++  +     +  
Sbjct: 167 ISANDLASAGADLNARTFASFEIYLVLTILYFLLALGFSTMFGAIRR 213



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 39/94 (41%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +         +L G   T  L+   M+   I+  L    + S  + + W+  VYVEV RN
Sbjct: 6   FQPVFGNLDLLLYGAWLTVRLSLMAMVLGLIVSVLGAVAKTSGIRPLRWLTDVYVEVIRN 65

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P LV IFF++  + +       +      + +N
Sbjct: 66  TPFLVQIFFIFFGLPAAGISMSPNTAALVALVVN 99


>gi|260441513|ref|ZP_05795329.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae DGI2]
 gi|291044876|ref|ZP_06570585.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291011770|gb|EFE03766.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 219

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +  P+ +    +      LT++ +    V S + G+ +++      R F+        L 
Sbjct: 1   MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAYRIRPFY-------ALA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 54  RAYIELSRNTPLLIQLFFLYY-----------GLPKMGIKWDGFTCGVIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR+ ++AVP+GQ+ A  A+GL+  +  R V LPQ     +P + +  L L+K +S+  
Sbjct: 103 EAVRADILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSVVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            VG A+L+ V   +I    +  E + +    YL + + ++L   R+  ++ 
Sbjct: 163 TVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENRVR 213



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G++ + + G  V        +    + R Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELSVYGVVLSLLFGLPVAVVTAYRIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|229817170|ref|ZP_04447452.1| hypothetical protein BIFANG_02429 [Bifidobacterium angulatum DSM
           20098]
 gi|229784959|gb|EEP21073.1| hypothetical protein BIFANG_02429 [Bifidobacterium angulatum DSM
           20098]
          Length = 224

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 14/237 (5%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
              V  F      R   F    M+    I +   +L +V+ L              + + 
Sbjct: 2   EERVAMFDWSFVQRYAPFFVKGMEMTLFISIIGIILALVVGLI-CAGVELARVPVARQIV 60

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +YI   +    P LV +   Y L F  P L          V        + L     ++
Sbjct: 61  RVYIE--ISRNTPLLVQL---YFLFFGLPKL--------GIVWSAETCAIVGLGFLGGSY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE +R+GL AVP  Q E A  LG T  ++   V+LPQA+   IP + +  + L K SS+
Sbjct: 108 MAEAMRAGLQAVPEVQRETAYVLGFTPMQSLTRVVLPQAVSGAIPGIVANVIFLFKESSV 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             A+  AD++ +   +I       E + + +  YL + + I+L    L  +     +
Sbjct: 168 VSAIALADVMYMAKDLIGMYYSTYESLAMLVVSYLIVLLPISLIGTWLERRFDYARR 224



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 40/80 (50%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA   + G   T +++  G+I A ++G +     L+   +   I RVY+E+ R
Sbjct: 9   DWSFVQRYAPFFVKGMEMTLFISIIGIILALVVGLICAGVELARVPVARQIVRVYIEISR 68

Query: 138 NIPPLVVIFFLYKSVLSVLP 157
           N P LV ++FL+  +  +  
Sbjct: 69  NTPLLVQLYFLFFGLPKLGI 88


>gi|186474523|ref|YP_001863494.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184198482|gb|ACC76444.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 236

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 8/221 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   LS   +T+          F+  I L++      R              I T+++ 
Sbjct: 15  WDGHRLSGLAVTLWLLVASVGVGFLASIPLAIARASKRRWISSPV-------RIYTYVLR 67

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P  V + L Y   +    +     +  +     F    +A +  T A++ E+    + 
Sbjct: 68  GTPLYVQLLLVYTGIYRFEFVRSHQMLE-AFFRSGFHCAILAFALNTCAYMTEMFAGAIR 126

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A P G++EAA A G+   K  R V++P A+R  +P  +++ + +L  +++A      D++
Sbjct: 127 ATPYGEVEAARAYGMNWLKMYRRVIVPSALRRALPSYSNEVILMLHATTVAFTATVPDML 186

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            V     + T  + E   +    Y+++S  +     R    
Sbjct: 187 KVARDANSATYHSFEAFGLAALTYVAVSFTLVAAFRRTERH 227



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 85  YATAIL-------VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           Y  A L        G   T WL  + +    +    +   R S  + ++   R+Y  V R
Sbjct: 8   YWRAFLCWDGHRLSGLAVTLWLLVASVGVGFLASIPLAIARASKRRWISSPVRIYTYVLR 67

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
             P  V +  +Y  +     +  H ++  F 
Sbjct: 68  GTPLYVQLLLVYTGIYRFEFVRSHQMLEAFF 98


>gi|116254867|ref|YP_770703.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259515|emb|CAK10653.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 252

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   S  L   +S+    L+R       +     +  T L++    + L+ L    +F
Sbjct: 33  LILSALSIALAFPVSIL-FALARLSRSPLLR-----WPVTALVYFTRGVPLLMLILWSYF 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P F+++   L  Y +AF++E+VR+G++A+  GQM+A  ALG +
Sbjct: 87  LVPLLTGADV-------PSFVTMLTTLVVYQSAFLSEVVRAGIVALGPGQMDAGRALGHS 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
           +  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL      + NQ   Q  +
Sbjct: 140 YIGAMRFIILPQALYNMIPSIISTFVSTIKDTTLGYVINVPDLTFAASQVNNQLLTQPFQ 199

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LI   +Y ++   +  F NRL   I  + 
Sbjct: 200 VFLILAIVYFAICWTLTYFANRLERSITRRR 230



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+   +  A  +  L    RLS + L+ W     V   R +P L++I + Y
Sbjct: 26  LGGLANTLILSALSIALAFPVSILFALARLSRSPLLRWPVTALVYFTRGVPLLMLILWSY 85

Query: 150 KSVL 153
             V 
Sbjct: 86  FLVP 89


>gi|255024101|ref|ZP_05296087.1| hypothetical protein LmonocyFSL_12858 [Listeria monocytogenes FSL
           J1-208]
          Length = 125

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/123 (30%), Positives = 74/123 (60%), Gaps = 1/123 (0%)

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A     AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++
Sbjct: 1   MAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNE 60

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NL+K+SSL   +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +L  
Sbjct: 61  VINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAVLTVLFKQLEK 119

Query: 391 KIA 393
           + +
Sbjct: 120 RFS 122


>gi|330816514|ref|YP_004360219.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327368907|gb|AEA60263.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 259

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 18/238 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +            L +   S     +     + VFS +LGI+  +    L      +   
Sbjct: 1   MQAFIENFLDWQLLISSLPSLLYTGLVNTLVLSVFSTLLGILAGMVL-ALMAVSPTRWLT 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-EFMSLYIALSCY 276
               +Y+  F       ++L+           V      +G +   P  +    +AL+  
Sbjct: 60  TPARIYVDVFRGLPAALVILV-----------VGQGLAPVGLALFGPNPYPLAIVALALI 108

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           ++A+IAEI RSG+ +V RGQ+ A  ALG+++  + R V++PQ +R I+P L +Q+++++K
Sbjct: 109 SSAYIAEIFRSGIQSVGRGQLYACQALGMSYWSSMRHVIVPQGIRRILPALANQFISIVK 168

Query: 337 NSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +SSL   +G      DL ++G      T   +  ++    +YL +++ +   +N L+ 
Sbjct: 169 DSSLVYFLGLLTSQRDLFTIGQNTAVNTAN-LSPLVAAGAVYLLITVPLTHAINHLDR 225



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 68/191 (35%), Gaps = 10/191 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK- 150
           G VNT  L+    +   + G ++    +S  + +    R+YV+VFR +P  +VI  + + 
Sbjct: 25  GLVNTLVLSVFSTLLGILAGMVLALMAVSPTRWLTTPARIYVDVFRGLPAALVILVVGQG 84

Query: 151 ----SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
                +    P P    ++   +  +          + +  +  +++      L +    
Sbjct: 85  LAPVGLALFGPNPYPLAIVALALISSAYIAEIFRSGIQSVGRGQLYACQ---ALGMSYWS 141

Query: 207 LSRHFHEKTG--KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             RH     G  + LP L      I    +LV          D   +GQ   +  + +SP
Sbjct: 142 SMRHVIVPQGIRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIGQNTAVNTANLSP 201

Query: 265 EFMSLYIALSC 275
              +  + L  
Sbjct: 202 LVAAGAVYLLI 212


>gi|319950338|ref|ZP_08024257.1| glutamine ABC transporter membrane protein [Dietzia cinnamea P4]
 gi|319436030|gb|EFV91231.1| glutamine ABC transporter membrane protein [Dietzia cinnamea P4]
          Length = 220

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 11/231 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              +F +   L    +T+  +    + + +LG ++++      R       + L   Y++
Sbjct: 1   MGDIFADYDVLGAVWVTIQLSILGSIGALILGTLVAVL-----RVSPVAVLRGLGTSYVN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           TF    L  L++ ++   L F   +    +F         F    I L+ Y AA+I E +
Sbjct: 56  TFRNLPLTLLMVFSIL-GLSFILQLSVSDDFARN-----AFWWAAIMLAVYHAAYICEAL 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP GQ EAA ++GL   ++ R V+LPQA R  I PL S  + L+KNS++A  +G
Sbjct: 110 RSGVNTVPVGQAEAARSIGLGFGQSLREVILPQAFRGAIAPLGSVIIALIKNSTVAAVIG 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             D   +   I    G ++     +  +++ L++ I L+   L+ K+A+K 
Sbjct: 170 VGDSAGLLQVITENEGASLPTFFFFAMVFVILTLPIGLWTTSLSRKLAVKR 220



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 38/99 (38%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L     T  L+  G I A I+GTLV   R+S   ++  +   YV  FRN+P  +++ F  
Sbjct: 11  LGAVWVTIQLSILGSIGALILGTLVAVLRVSPVAVLRGLGTSYVNTFRNLPLTLLMVFSI 70

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             +  +L +           +     L+         A 
Sbjct: 71  LGLSFILQLSVSDDFARNAFWWAAIMLAVYHAAYICEAL 109


>gi|260575377|ref|ZP_05843376.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022297|gb|EEW25594.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 295

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 103/264 (39%), Gaps = 20/264 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +     Y+    VL           G ++ N  L     T+       V + V+G+ + L
Sbjct: 32  LQTGMNYRWQWGVLADFVIRRDPVSGDWVPNIILLGLFTTLRLALWGGVVALVVGLAIGL 91

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN------- 255
                 R     T + L  +Y+           + I   +      P+ G  +       
Sbjct: 92  M-----RVVPSPTARTLAAVYVGLIRNIPPLVFLFIFYFFLSSQVIPLTGLQSAVRSASP 146

Query: 256 --------FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                     G       F+S   A+  Y AAFIAEI+R+G+ AV  GQMEAA ALG+  
Sbjct: 147 QTLAALEVLFGPPRQIGPFLSAAAAIGLYAAAFIAEIIRAGVNAVGTGQMEAAQALGMGW 206

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
             A R V+LPQA+  +  PL ++++ ++K S+LA  V   DL          T    E+ 
Sbjct: 207 ASAMRRVILPQALARVWAPLANEFILMIKFSALASLVSVPDLTFQAQQAGITTRSMFEVW 266

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
           L+   IY  +   +A     L  +
Sbjct: 267 LLVAAIYFVICFGLASLFGALERR 290



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 9/136 (6%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           +     + +++   +     + +  +   M   N     G L   A F I +  V   S 
Sbjct: 7   KARFGLIDVVVLCTVAAAVWFVLARLQTGM---NYRWQWGVL---ADFVIRRDPV---SG 57

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 IL+G   T  LA  G + A ++G  +G  R+  +     +  VYV + RNIPPL
Sbjct: 58  DWVPNIILLGLFTTLRLALWGGVVALVVGLAIGLMRVVPSPTARTLAAVYVGLIRNIPPL 117

Query: 143 VVIFFLYKSVLSVLPI 158
           V +F  Y  + S +  
Sbjct: 118 VFLFIFYFFLSSQVIP 133


>gi|206560034|ref|YP_002230798.1| putative amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
 gi|198036075|emb|CAR51969.1| putative amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 252

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 13/213 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-----YISTFLIFGLPTLVLIALKYQLH 245
           +    L +VL+  +   S       G A+ L       +   +I     + ++ L +  +
Sbjct: 34  LGGAALSLVLAFASAVASAVLGVALGVAMALARGPARMLLLAVIGFFRAIPVLMLIFWTY 93

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  PVL   +        P   ++  AL+    A++A  V +G++A   GQ +A ++LGL
Sbjct: 94  FLMPVLLHMDV-------PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGL 146

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +  R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  V   + N+      
Sbjct: 147 TRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLMVYPA 206

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I L    IYL L   +      L ++    ++
Sbjct: 207 PIFLFVALIYLVLCTSLDGAARWLLSRGPRTQR 239


>gi|163868115|ref|YP_001609319.1| ABC transporter, permease protein [Bartonella tribocorum CIP
           105476]
 gi|161017766|emb|CAK01324.1| ABC transporter, permease protein [Bartonella tribocorum CIP
           105476]
          Length = 240

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 1/189 (0%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + K  KA+  L+ + F       L L  + Y L      +  +  +        F++ 
Sbjct: 49  RSNIKMAKAIAHLFSTVFRGL-PELLTLFLVYYGLQSLIQNIFDYFNLEVMFSINAFVAG 107

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS   AAF  E+         +GQ EAA ALGL+       ++ PQ +R+ +P L++
Sbjct: 108 VLALSMVFAAFSCEVWLGAFNIFDKGQYEAAKALGLSRSTTFFRIVFPQLIRNALPGLSN 167

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +L LLK++SL   +   DL+      +  T + +   L+   +YL  S   A  +  L 
Sbjct: 168 NWLTLLKDTSLVSTIALVDLMRQTNLAVAATNKPMLFYLVACLLYLLFSAFFAAILRHLE 227

Query: 390 AKIALKEKK 398
                  KK
Sbjct: 228 TYTQRGYKK 236


>gi|332040230|gb|EGI76610.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 228

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 39/120 (32%), Positives = 72/120 (60%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P F +  + L  + +A++AEI+R GL++V RGQ EAA+A GL+  +    V+ PQA+R +
Sbjct: 90  PGFWAGALGLGLHGSAYVAEILRGGLLSVHRGQREAALAAGLSPLQVFVCVVWPQALRVM 149

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           + PL + Y+ LLK+SSL   +   +L+     I +++   + I L+    Y +++  +++
Sbjct: 150 LAPLLNTYVTLLKDSSLCALIATEELMLAARAIASESFLPLHIFLLVGVFYFAIAFPLSM 209


>gi|325063350|gb|ADY67040.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 252

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 8/201 (3%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            + ++L           +  K   L +  T L++    + L+ L    +F  P+    + 
Sbjct: 37  ALAIALAFPVSILMAMARLSKWRLLRWPVTGLVYVTRGVPLLMLILWSYFLVPLWTGADV 96

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P F+ +   L  Y  AF++E+VR+G++A+  GQM+AA ALG ++  A R ++L
Sbjct: 97  -------PSFVIMLTTLVIYQGAFLSEVVRAGIVALGAGQMDAARALGHSYLGAMRFIIL 149

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYL 375
           PQA+ ++IP + S ++  +K+++L   +   DL      + NQ   Q  ++ LI   +Y 
Sbjct: 150 PQALYNMIPSMISTFVATIKDTTLGYVINVPDLTFAASQVNNQLLTQPFQVFLILAVVYY 209

Query: 376 SLSIMIALFMNRLNAKIALKE 396
           ++   +    N +  +IA + 
Sbjct: 210 AICWSLTYLANAVERRIAKRR 230



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 30/66 (45%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+   +  A  +  L+   RLS  +L+ W     V V R +P L++I + Y
Sbjct: 26  LGGLANTIILSALAIALAFPVSILMAMARLSKWRLLRWPVTGLVYVTRGVPLLMLILWSY 85

Query: 150 KSVLSV 155
             V   
Sbjct: 86  FLVPLW 91


>gi|322831659|ref|YP_004211686.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321166860|gb|ADW72559.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 221

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              +      + T  ++ V + V G+ + +    + R  + KT +A+  +Y+    I   
Sbjct: 11  WPYMPELLAGLWTTIELTVMATVGGVAIGICGAAI-RCGNHKTLRAVWGVYVEA--IRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P +G     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPAIGLKMTAGE--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT  +    ++LP +++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLTRSQTFLRIVLPPSLKRIYPSLVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I ++T  + E+ L+    YL LS+ +   +     ++
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLFYLLLSVAMRQLLLLAGRRV 216



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++   Y   +L G   T  L     +    IG    A R   +K +  +  VYVE  
Sbjct: 5   LNFSALWPYMPELLAGLWTTIELTVMATVGGVAIGICGAAIRCGNHKTLRAVWGVYVEAI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPAIGLKMTAGEAALLAMLIN 100


>gi|206562621|ref|YP_002233384.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
 gi|198038661|emb|CAR54621.1| histidine transport system permease [Burkholderia cenocepacia
           J2315]
          Length = 237

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 87/229 (37%), Gaps = 8/229 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                 ++ +    S   +T+        F F L + L++     +R             
Sbjct: 7   QYWQNYLYSDGYRFSGLAITLWLLVVSIAFGFALAVPLAIARASSNRWISGPV------- 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++ T++  G P  V + + Y   +   V+     +  +          +A      A+  
Sbjct: 60  WLYTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLD-TFFRNAMNCTLLAFVLNECAYAT 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI    + A   G++EA +A G++  K    ++LP A+R  +P  +++ + +L  ++LA 
Sbjct: 119 EIFAGAIKATSSGEIEAGMAYGMSRFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAF 178

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                D++ V   + + T  + +   I   +Y  +   +     +L  +
Sbjct: 179 TATVPDILKVTRDVNSATYMSFQAYGIAAVLYAVVVFALIWAFRKLETR 227



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 65/218 (29%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    +     +   +   R S+N+ ++    +
Sbjct: 5   VSQYWQNYLYSDGYR---FSGLAITLWLLVVSIAFGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLDTFFRNAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSSGEIEAGMAYGMSRFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAVVVFALIW 219


>gi|218699019|ref|YP_002406648.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli IAI39]
 gi|218369005|emb|CAR16759.1| glutamate and aspartate transporter subunit ; membrane component of
           ABC superfamily [Escherichia coli IAI39]
          Length = 246

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 111/227 (48%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTF 227
              S   +T+  +   ++ +F++G +  +  T  +R        + +  + +PL+     
Sbjct: 24  WIWSGFQVTIALSICAWIIAFLVGSLFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+   +      +     QF           F+S  + L  +TAA + E VR+
Sbjct: 84  WYLVIPELLPEKIGMWFKAELDPNIQF-----------FLSSMLCLGLFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KNS++A  +G  
Sbjct: 133 AIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++  I L M  +  K+ L
Sbjct: 193 DMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRL 239



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+L G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSLFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|327194083|gb|EGE60957.1| putative ArtM, ABC-type arginine/histidine transport system,
           permease component ArtM [Rhizobium etli CNPAF512]
          Length = 252

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 5/233 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                                  + V S V G +L++    L++       +     Y +
Sbjct: 23  MMDFSWIFNYWPLIVAGAIQTLLLLVISVVFGFILAIGL-ALAQVNGPVWLRGCAKAYCT 81

Query: 226 TFLIFGLPTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +F   G P L+ +  L Y +    P++           V   F    ++ +   AA+ AE
Sbjct: 82  SF--RGTPLLIQLWLLYYGVGSLLPMIPGLRTSFLWPIVREGFFFAAVSFTLNYAAYEAE 139

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  L+AVP+G++EA  A G++     R + LP+A+R  +P +  + +  LK + LA  
Sbjct: 140 VLRGALLAVPKGELEAGRAFGMSRWTLLRRIWLPRAIRIALPTIGGEVVLQLKATPLAFT 199

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           V   DL +V   +   T    E ++I    Y+ L+++I      +  ++ ++ 
Sbjct: 200 VTVMDLYAVAYKVRQDTLLVYEPLIIVTVFYVCLTLVITRAFRLVELQVPIRR 252



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 44/118 (37%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++++ ++ ++   +Y   I+ G + T  L    ++   I+   +   +++    +    +
Sbjct: 18  QLEERMMDFSWIFNYWPLIVAGAIQTLLLLVISVVFGFILAIGLALAQVNGPVWLRGCAK 77

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            Y   FR  P L+ ++ LY  V S+LP+            +               A 
Sbjct: 78  AYCTSFRGTPLLIQLWLLYYGVGSLLPMIPGLRTSFLWPIVREGFFFAAVSFTLNYAA 135


>gi|261867469|ref|YP_003255391.1| arginine transporter permease subunit ArtM [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412801|gb|ACX82172.1| arginine transport system permease protein [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 227

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 95/227 (41%), Gaps = 6/227 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    LS     + T+  + V S  +          +      K  K+   LY++ F   
Sbjct: 1   MFQEYLSVIAQGIPTSLLLTVVSLAIAF-FLALVLTVLLTMGNKAVKSAVNLYLTLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y            N    S +S  +    + L+  ++A+  ++    + 
Sbjct: 58  GTPLLVQFFLIYAGP--GQFQWIVNSPLWSVLSNAWFCAALTLALNSSAYSTQLFHGAVK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+ Q E+  ALGL+  +    +L+P A++  +P  +++ + + K ++LA  +   D++
Sbjct: 116 AIPKVQWESCEALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTALASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +      A+ I  I   IYL ++ +  L + RL  K+   E+
Sbjct: 175 GYARQLYGTDYDALTIYGIAGGIYLIITGIATLLLRRLENKVLAFER 221


>gi|86750027|ref|YP_486523.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris HaA2]
 gi|86573055|gb|ABD07612.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris HaA2]
          Length = 501

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 105/259 (40%), Gaps = 20/259 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++  L   +   + I    +       +  R      +T+  +    V S  +GI L+L 
Sbjct: 257 LLMTLATFIGIAVVIAWLRLDRGGLPIVGTRQWGGLLVTLVVSVTGIVASMPIGIALAL- 315

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       +   + +I  +    L T VL    Y L           F+ G+   
Sbjct: 316 ----GRRSTIPLIRLFSVGFIEFWRGVPLIT-VLFFATYMLPL---------FLPGNFTI 361

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              M + I ++ +  A+ AE+VR GL A+PRGQ EAA ALGL++ K T L++LPQA+R +
Sbjct: 362 DGLMRVLIGVALFAGAYNAEVVRGGLNAIPRGQAEAASALGLSYAKTTGLIVLPQALRHV 421

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSV-----GGTIINQTGQAIEIILIWMFIYLSLS 378
           IP L + ++ L K++SL   V   DL+            +              IY    
Sbjct: 422 IPGLVNSFIALFKDTSLVSIVALFDLLGQLRAAFADPTWSTPTTLFTGFAFTGLIYFVFC 481

Query: 379 IMIALFMNRLNAKIALKEK 397
             ++ +   +  ++    +
Sbjct: 482 FGMSRYSLFVEHRLNAHRR 500


>gi|312139385|ref|YP_004006721.1| glutamate abc transporter integral membrane subunit gluc
           [Rhodococcus equi 103S]
 gi|325672734|ref|ZP_08152430.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
 gi|311888724|emb|CBH48036.1| putative glutamate ABC transporter integral membrane subunit GluC
           [Rhodococcus equi 103S]
 gi|325556611|gb|EGD26277.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Rhodococcus equi ATCC 33707]
          Length = 227

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 7/219 (3%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
              T+       + + + G +L+       R       +     Y++ F    L TL+++
Sbjct: 15  FWTTVQLTFWSALGALIWGTILAAM-----RVSPVPILRIFATWYVNIFRNTPL-TLIIV 68

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                L+ +  V               F    +    YTAAF+ E +RSG+  VP GQ E
Sbjct: 69  FCSVGLYQNLGVHFAPEDSSTFIDQNNFRLAVLGFVVYTAAFVCESLRSGINTVPIGQAE 128

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-II 357
           AA +LGLT  +  R+++LPQA R++I PL S  + L KN+++A A+G A+   +  T I 
Sbjct: 129 AARSLGLTFTQGIRMIVLPQAFRAVIAPLGSVLIALTKNTTIASAIGVAEASLLMKTMIE 188

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           N+  +   +  I+   ++ L++ +      L  ++A+K 
Sbjct: 189 NEADKLFLVFGIFAIGFMILTLPVGFLFGYLGKRLAVKR 227



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 43/105 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +Y   ++  F  T  L F   + A I GT++ A R+S   ++      YV +FRN P  
Sbjct: 5   DTYGDQLVSAFWTTVQLTFWSALGALIWGTILAAMRVSPVPILRIFATWYVNIFRNTPLT 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           ++I F    +   L +          +  NN  L+     + T A
Sbjct: 65  LIIVFCSVGLYQNLGVHFAPEDSSTFIDQNNFRLAVLGFVVYTAA 109


>gi|148982289|ref|ZP_01816696.1| cystine transport system permease protein [Vibrionales bacterium
           SWAT-3]
 gi|145960554|gb|EDK25911.1| cystine transport system permease protein [Vibrionales bacterium
           SWAT-3]
          Length = 139

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 75/128 (58%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  I L+ + AA++AE +R+ +I + R QMEA++++G+T  +A R V+LPQA R  +
Sbjct: 6   AFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRVILPQATRVAL 65

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L + +++++K++SLA  +G A++++      + + +  E  L    IY  + +++   
Sbjct: 66  PSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWGVVVILTRI 125

Query: 385 MNRLNAKI 392
                 K+
Sbjct: 126 QIWAEVKL 133


>gi|329910724|ref|ZP_08275365.1| amino acid ABC transporter, permease protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327546104|gb|EGF31167.1| amino acid ABC transporter, permease protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 198

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 11/171 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +  + +  +YI  F   G   LV +   + +    P   +            F    
Sbjct: 19  SPWRGVRWVANIYIEVF--RGTSLLVQLFWLFFVLPLPPFDVRL---------TPFSVAV 67

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + L     A+ AE++R  L +VPRGQ+EAA+AL ++       ++LPQA+ + IPP T+ 
Sbjct: 68  LGLGLNIGAYGAEVMRGALSSVPRGQIEAAVALNISPFHRFFNIVLPQALANAIPPSTNL 127

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + LLK +SL   +  ADL      ++  T +  EI  I + IY  ++  I
Sbjct: 128 LIELLKGTSLVSLITLADLTFRANQLVEATFRTTEIFTIALVIYFVIAQAI 178


>gi|117618047|ref|YP_855200.1| arginine transporter permease subunit ArtM [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117559454|gb|ABK36402.1| arginine ABC transporter, permease protein ArtM [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 220

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 6/220 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      +    ++  FS +LG+   L A  ++     +      L+ +   +  G
Sbjct: 1   MQDYLMTLLGGLAITLQLTAFSLLLGV---LMAAAMTWVLERRIPVVTQLVQLWVLIFTG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L+ I L Y        L +        +   +    +AL   TAA+   + +  L A
Sbjct: 58  TPLLIQIFLIYYGPGQFAWLKEGPL--WPLLKQPWFCAVLALGFNTAAYSTRLFKGALDA 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G++EA  ALG +  +    + +  A R ++P  +++ + +LK SSLA  +   D++ 
Sbjct: 116 IPAGEVEACRALGFSAGQTLW-MKVRHAARRLVPAYSNEVILVLKGSSLASTITIMDVMG 174

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   +  QT   + +  +   +YL+++ ++ +       +
Sbjct: 175 LAQRLNAQTYDTLAVFTVAGALYLTMNGLLTIGFRWCERR 214


>gi|171058821|ref|YP_001791170.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170776266|gb|ACB34405.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 366

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 15/241 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             VL  G F   +  +     +     +   S VL   +++ A  L R       ++L  
Sbjct: 137 FFVLMGGGFGLAKVGTDQWGGLPLTVTLATLSIVLAFPIAV-AVALGRRSKLPAIRSLCT 195

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+            LI++ +   F  P+L         T     + + + ++ ++AA++
Sbjct: 196 LYVELIRGVP-----LISVLFMASFMFPLLM-----PSGTSPDVLLRVLVGITLFSAAYM 245

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR+GL A+P GQ+EAA ++GL   +  RLV+LPQA+ +++P L + ++ + K++SL 
Sbjct: 246 AEIVRAGLQAIPAGQLEAAASVGLGWWQTQRLVVLPQALAAVVPSLMNNFIAIFKDTSLI 305

Query: 342 VAVGFADLVSVGGTIINQT--GQAI--EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             V   +L    G  ++     +    E  L    IY  +   ++ +   + A++     
Sbjct: 306 TVVSLYELTGSLGLALSGDPVWRPFKIEGYLFITAIYFVICFAMSRYSLWVEAQLGRSRN 365

Query: 398 K 398
           +
Sbjct: 366 R 366



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 74/207 (35%), Gaps = 11/207 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  LA   ++ A  I   V  GR S    +  +C +YVE+ R +P + V+F     
Sbjct: 157 GLPLTVTLATLSIVLAFPIAVAVALGRRSKLPAIRSLCTLYVELIRGVPLISVLFMASFM 216

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS----FVLGIVLSLFATRL 207
              ++P      VL   +       +     +       + +        + L  + T+ 
Sbjct: 217 FPLLMPSGTSPDVLLRVLVGITLFSAAYMAEIVRAGLQAIPAGQLEAAASVGLGWWQTQR 276

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-------FDKPVLGQFNFIGGS 260
                +     +P L  +   IF   +L+ +   Y+L           PV   F   G  
Sbjct: 277 LVVLPQALAAVVPSLMNNFIAIFKDTSLITVVSLYELTGSLGLALSGDPVWRPFKIEGYL 336

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRS 287
            ++  +  +  A+S Y+    A++ RS
Sbjct: 337 FITAIYFVICFAMSRYSLWVEAQLGRS 363


>gi|307130054|ref|YP_003882070.1| membrane protein of an ABC superfamily glutamate and aspartate
           transporter [Dickeya dadantii 3937]
 gi|306527583|gb|ADM97513.1| membrane component of an ABC superfamily glutamate and aspartate
           transporter [Dickeya dadantii 3937]
          Length = 246

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             +S   +T+  +   +V +F+LG +L +  T  +R        + +  + +PL+     
Sbjct: 24  WIISGLQVTVTLSLCAWVIAFLLGSLLGILRTVPNRLLAGIGTCYVELFRNVPLIVQFFS 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+   +      +     QF           F+S    L  +TAA + E VR+
Sbjct: 84  WYLVVPELLPTKIGMWFKAELDPNIQF-----------FLSSMFCLGMFTAARVCEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ ++PRGQ  A +A+GLT  +  R VLLP A R ++PPLTS+ LNL+KNS++A  +G  
Sbjct: 133 GIQSLPRGQKAAGLAIGLTLPQTYRYVLLPNAYRVVVPPLTSEMLNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++ +I L M  +  K  L
Sbjct: 193 DMAAQAGKLLDYSAHAYESFSAITLAYIGINAIIMLIMQIVEHKTRL 239



 Score = 63.4 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   I+ G   T  L+    + A ++G+L+G 
Sbjct: 3   IDWNWGIFLQSAPFG----------NTTYLGWIISGLQVTVTLSLCAWVIAFLLGSLLGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+L+A I   YVE+FRN+P +V  F  Y  V  +LP      
Sbjct: 53  LRTVPNRLLAGIGTCYVELFRNVPLIVQFFSWYLVVPELLPTKIGMW 99


>gi|88601347|ref|YP_501525.1| amino acid ABC transporter permease [Methanospirillum hungatei
           JF-1]
 gi|88186809|gb|ABD39806.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Methanospirillum hungatei JF-1]
          Length = 218

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 11/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     I V +F  G++++L    ++       G  +         ++G   L  + 
Sbjct: 1   MDQISFIFDIMVPAFANGLLITLALVAITAPIGFLLGVGVA-----CGRVYGGKGLSWLM 55

Query: 240 LKYQLHFDKPVLGQFNFIGGS------TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             Y + F    L    FI          V   F++  +      +A+ +E +R  +++V 
Sbjct: 56  HIYTIFFRGCPLLLLLFILYFGLPSVGIVLTPFVASVLGFIFCNSAYNSEYIRGSILSVK 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ+ AA ALG+T  +A   ++LPQA+R  IP ++++++ L+K SSLA  +   +L    
Sbjct: 116 EGQLIAAKALGMTKNQAILNIVLPQALRRSIPGISNEFIYLIKYSSLAYMITVIELTGAS 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             I  +     E  +    +YL L  +     N L  K A+
Sbjct: 176 KLIATKYFAYNETFIAVAIVYLLLVTITTFGANALEKKYAI 216


>gi|311694312|gb|ADP97185.1| ABC transporter, membrane spanning protein [marine bacterium HP15]
          Length = 217

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 99/219 (45%), Gaps = 18/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+    T+  +    V   +LG+++       ++  +   G  L +L     +I      
Sbjct: 17  LTGVWNTIIISVVAIVVGTILGLIVGFLRAESNKAVNVLFGSVLDVLRSVPLIIQ----- 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +++   +      P+               F++  I LS YT AF++E+ RSG  +V   
Sbjct: 72  LILFSTFVGAMGNPL-------------APFVAGSIVLSLYTMAFMSEVFRSGFESVSPS 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
              AA +LG+T  +    + LP  +R++ P      L+++K+S+L   +G+ +L+     
Sbjct: 119 MQTAARSLGMTKWQTIYHIRLPIGLRAVFPSWLGVALSVIKDSALVSVIGYMELLRTSEQ 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +I++T Q +EI++     Y  +S  ++ +   +  K+A+
Sbjct: 179 LISRTQQPLEILIGVGIFYFIISYPLSHYGRYVERKMAI 217


>gi|296271868|ref|YP_003654499.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096043|gb|ADG91993.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 219

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 97/226 (42%), Gaps = 20/226 (8%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           + L           +     I      L I+  L   R++R  +    + +  +Y++ F 
Sbjct: 3   LSLYITYWPLLFKGLLFTIYICSIGIFLAILGGLILYRINR-INLLITRLIYSIYLTVF- 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS---LYIALSCYTAAFIAEIV 285
             G P LV + L Y               GG  +  E  +     + LS Y AA+ AEI 
Sbjct: 61  -RGTPLLVQVYLVYY--------------GGPFIGLELTAEQVGILGLSLYGAAYFAEIF 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG  ++P+G +EAA  LG + ++  R + LP+ +  I+PP  +  + L+K S++   + 
Sbjct: 106 RSGFESIPKGHIEAAYDLGYSRQQILRYIQLPEMLGLILPPSINLTIILIKESAILSIIT 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++L +   T+  +T   +E  +     Y  ++ ++A   +    +
Sbjct: 166 VSELTTAAVTMGTETFSMVEPYVFLALSYWCITFIVAKIGSWCENR 211



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +  G + T ++   G+  A + G ++         +   I  +Y+ VFR  P LV
Sbjct: 8   TYWPLLFKGLLFTIYICSIGIFLAILGGLILYRINRINLLITRLIYSIYLTVFRGTPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            ++ +Y     +        V   G+ L 
Sbjct: 68  QVYLVYYGGPFIGLELTAEQVGILGLSLY 96


>gi|227823073|ref|YP_002827045.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
 gi|227342074|gb|ACP26292.1| putative transmembrane component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 222

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 14/222 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +               +   + VLGI++S+      R  ++   KA+    +   +I 
Sbjct: 9   WLHDAAGAIAHGAAMTLLLIACTTVLGILISILLAAARRSRYDLLSKAVA---VYVEVIR 65

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P LV +   +           F            ++  +A++   AA+  EIV +GL 
Sbjct: 66  NTPFLVQLFFIF-----------FGLPTIGIRLDPIVAAILAMTLNMAAYTTEIVGAGLD 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP+GQ EAA+ALGL   +    V+LPQA++ I P LTSQ + ++  S++   +   +L 
Sbjct: 115 AVPKGQSEAALALGLRAPQVFIKVVLPQALKVIFPALTSQVVIMMLESAVVSQIAVRELA 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +  +T ++ E  L+   IYL LS+ I  F      ++
Sbjct: 175 HEADLLQARTFRSFETYLVVTMIYLGLSMAIRRFFVAGGRRV 216



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 40/92 (43%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L     +   +I  L+ A R S   L++    VYVEV RN P LV +FF++  + ++
Sbjct: 24  TLLLIACTTVLGILISILLAAARRSRYDLLSKAVAVYVEVIRNTPFLVQLFFIFFGLPTI 83

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
               D  +     M LN    +   +    +A
Sbjct: 84  GIRLDPIVAAILAMTLNMAAYTTEIVGAGLDA 115


>gi|89899770|ref|YP_522241.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89344507|gb|ABD68710.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 220

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 18/204 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
              +G+V+S               + L   Y++       P LVL+   Y          
Sbjct: 35  GMAIGLVVSFAL-----ISPVAIARNLAGAYVTVT--RNTPLLVLVLFTY---------- 77

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F          +  S    L+ Y+  ++AE+ R+G+++VP+G  EA  A+GLT  +   
Sbjct: 78  -FALPDLGVRLGDIESFVATLAIYSGGYLAEVFRAGMLSVPKGLSEAGQAIGLTRMQIRF 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +++P   R+++P L S  ++L K++SLA A+   +L      I  ++ + +E  +I   
Sbjct: 137 SIIMPIMFRNVLPALGSTVISLFKDTSLAAAIAVPELTYQARKINVESFRVVETWIIASL 196

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           +Y+    ++A+   R+   +A+  
Sbjct: 197 LYVCTCAVLAMLFRRVERHLAIPR 220


>gi|238792193|ref|ZP_04635828.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           intermedia ATCC 29909]
 gi|238728430|gb|EEQ19949.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           intermedia ATCC 29909]
          Length = 230

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 2/193 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + + F  +  + +   Y  T L+ G+P LV++ L +                G   
Sbjct: 32  LINAVIKLFGPRWLRWISTGY--TTLVRGIPELVIMLLLFFGGEMLVNGFLSLLGVGPVR 89

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F+S  +A+     A+  E  R     V RGQ+EAAIA G++  +  R ++LPQ +  
Sbjct: 90  FNTFISGVLAIGIVFGAYYTETFRGAFQTVDRGQLEAAIAYGMSPAQVFRRIMLPQMLSF 149

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            IP + + +L L+K S+L   +G  D+V +       T +      +   IY+ ++ + +
Sbjct: 150 AIPGINNNWLGLMKASALISILGLEDMVWLAEQAGRATQKPFLFYFLVAMIYMVITALSS 209

Query: 383 LFMNRLNAKIALK 395
              + L+ + AL 
Sbjct: 210 WGFSLLSRRYALS 222


>gi|325063884|gb|ADY67574.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 222

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 14/204 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +    L  V+ +    ++R    K  + L + ++    I   P LV I   +    
Sbjct: 25  IGLAIAGMSLATVIGVLG-VVARRSRFKLLRGLVIGFVEA--IRNTPFLVQIFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F            ++  IAL+    A+  EI+R G+ ++P+GQ+EA +ALGL 
Sbjct: 78  -------FALPQIGIKLNPTVTAIIALALNGGAYAIEIIRGGVDSIPKGQVEAGLALGLH 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++L  A+R++ P LTSQ++ L   +S+  ++   +L SV   I   T ++ E+
Sbjct: 131 RAQIFRHIILKPALRAVYPSLTSQFIMLTLTTSVCTSIAAYELTSVAQQIEADTFRSFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
                 +YL +S ++    + ++ 
Sbjct: 191 YFSITLLYLVISSLMMGVFSLISR 214



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+  + T  LA +GM  AT+IG L    R S  KL+  +   +VE  RN P LV IFF+
Sbjct: 17  LLLACLATIGLAIAGMSLATVIGVLGVVARRSRFKLLRGLVIGFVEAIRNTPFLVQIFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  +    + ++     + LN    +   +    ++ I       G+ L L   ++ 
Sbjct: 77  FFALPQIGIKLNPTVTAIIALALNGGAYAIEIIRGGVDS-IPKGQVEAGLALGLHRAQIF 135

Query: 209 RHFHEKT 215
           RH   K 
Sbjct: 136 RHIILKP 142


>gi|312132395|ref|YP_003999734.1| hism3 [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772678|gb|ADQ02166.1| HisM3 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 219

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 14/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      R   F          I VF  +L I + L              + +  +YI
Sbjct: 1   MTFDWSFVQRYAPFFVNGTLMTLFISVFGILLAIAVGLV-CAGVEIARIPVARQIVRIYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P LV +   Y L+F  P L          V        + L     +++AE 
Sbjct: 60  E--LSRNTPLLVQL---YFLYFGLPKL--------GVVWSAETCAIVGLGFLGGSYMAEA 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL AVP  Q E A  LGLT  +    V+LPQA+ + IP + +  + L K SS+  A+
Sbjct: 107 MRGGLEAVPNVQRETAYVLGLTSTQIITRVILPQAVSTAIPGVVANVIFLFKESSVVSAI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             AD++ +   +I       E + + +  YL + + I++F   L  +   + +
Sbjct: 167 ALADVMYMAKDLIGMYYSTYESLFVLVVAYLVILLPISIFGTWLERRFDYERR 219



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 40/78 (51%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA   + G + T +++  G++ A  +G +     ++   +   I R+Y+E+ R
Sbjct: 4   DWSFVQRYAPFFVNGTLMTLFISVFGILLAIAVGLVCAGVEIARIPVARQIVRIYIELSR 63

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV ++FLY  +  +
Sbjct: 64  NTPLLVQLYFLYFGLPKL 81


>gi|294782144|ref|ZP_06747470.1| amino acid ABC transporter, permease protein [Fusobacterium sp.
           1_1_41FAA]
 gi|294480785|gb|EFG28560.1| amino acid ABC transporter, permease protein [Fusobacterium sp.
           1_1_41FAA]
          Length = 240

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 18/245 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
              +++ +   D  +   F        +    LT+       + S V+GI+ S       
Sbjct: 8   GIILINSIKNGDRKMDWEFIAKYTPEFIHAGILTLKIGGIGIMLSIVVGILGSWVLYE-- 65

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + K  K + + Y+   L    P LV +   + L++  P +       G   SPE   
Sbjct: 66  ---NFKFFKQIIIGYVE--LSRNTPLLVQL---FFLYYGLPKI-------GIKFSPEL-C 109

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L+    +++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT
Sbjct: 110 GIIGLTFLGGSYMIETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLT 169

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  + +LK +S+  A+   D++ V   +I    +  E + + +  YL + + ++LF   L
Sbjct: 170 ANIIFMLKETSVFSAISLIDMMFVTKDLIGLYYKTEESLFMLVVGYLIILLPLSLFGVWL 229

Query: 389 NAKIA 393
             K+ 
Sbjct: 230 ERKLK 234


>gi|259416339|ref|ZP_05740259.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Silicibacter sp. TrichCH4B]
 gi|259347778|gb|EEW59555.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Silicibacter sp. TrichCH4B]
          Length = 442

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 63/291 (21%), Positives = 122/291 (41%), Gaps = 18/291 (6%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +      G +    +   + +   E+   I  +V  F  +  V S+      S+V     
Sbjct: 167 MPVSAALGFVLGYVVYKALAQSASELIGLIVGVVAAFVWWLFVASLFSSALASVVPLALE 226

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            + +R      L++         S  +GIVL+L      R       K L + +I     
Sbjct: 227 PVESRQFGGFMLSITIGVVAIGLSLPIGIVLAL-----GRQSDLLIVKTLCVGFIEFIRG 281

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             L TL+ +A      F  P           T     M ++I ++ + +A++AE++R GL
Sbjct: 282 VPLITLLFVASTLLNIFMPP----------GTNFDIIMRVFIMVTLFASAYMAEVIRGGL 331

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ E A +LGL + +A RL+++PQA++  IP + S ++ + K+++L   +G  D 
Sbjct: 332 AALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPGIVSTFIGVFKDTTLVSVIGLFDP 391

Query: 350 VSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +++   I       G   E+      ++      ++ +   L  K+    +
Sbjct: 392 LNLTNAIRADADWNGLVWELYGFIALLFFVFCFGMSRYSMYLERKLQTGHR 442


>gi|222081581|ref|YP_002540945.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726260|gb|ACM29349.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 216

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 15/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  + T   +   + +LG+ L++     SR    +  +A   LY+S +   G P L
Sbjct: 9   WPALLDGLLTTVTVSFSALLLGVPLAVLLAAASRS--GRLQRAAAGLYVSFW--RGTPIL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + + L           F+G     P  ++  +AL+  TAAF +EI R+GL+AVPRG
Sbjct: 65  VQLLVIFYL---------LPFLGLELEPP--VAAALALALNTAAFQSEIYRAGLLAVPRG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA  LGLT  +    + +PQA+R+++P L  +   L+KNSSL   +   D+      
Sbjct: 114 QIEAAEMLGLTAAQTFLCIEVPQAVRTMLPALVGEMQALVKNSSLVSVIAVMDVTRRAQQ 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   T + +E     + +Y+++   +A     +  ++    ++
Sbjct: 174 VAASTFRPLEAYASALLLYVAVGAALAGIGLLMERRLTQGARR 216



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G + T  ++FS ++    +  L+ A   S  +L      +YV  +R  P LV +
Sbjct: 9   WPALLDGLLTTVTVSFSALLLGVPLAVLLAAASRSG-RLQRAAAGLYVSFWRGTPILVQL 67

Query: 146 FFLYK 150
             ++ 
Sbjct: 68  LVIFY 72


>gi|330944618|gb|EGH46568.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 164

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 10/170 (5%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + I   L   +P LV + L +   F  P+    +        P F    + LS + A+ +
Sbjct: 1   MRIYLELFRAIPVLVWLYLFF---FGLPIFLGLSI-------PAFWCAVLVLSLWGASEV 50

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E+VR GL ++PRGQ EA +A+GL   +    VLLPQA++ + PP+ + Y  L+K SSLA
Sbjct: 51  GEVVRGGLRSIPRGQREAGLAIGLGLGQLYGRVLLPQALKRLTPPVINVYTRLIKTSSLA 110

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           V +G  D+  VG  II +T +++ I       +  +   ++     L  +
Sbjct: 111 VLIGVVDVTKVGQQIIERTYESVLIYGFLFLFFFIVCYPLSAASRVLERR 160


>gi|241554154|ref|YP_002979367.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863460|gb|ACS61122.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 252

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 102/211 (48%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   S  L   +S+    L+R       +     +  T L++    + L+ L    +F
Sbjct: 33  LILSALSIALAFPVSIL-FALARLSRSPLLR-----WPVTALVYFTRGVPLLMLILWSYF 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P F+++   L  Y +AF++E+VR+G++A+  GQM+A  ALG  
Sbjct: 87  LVPLLTGADV-------PSFVTMLTTLVVYQSAFLSEVVRAGIVALGPGQMDAGRALGHG 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
           +  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL      + NQ   Q  +
Sbjct: 140 YLGAMRFIILPQALYNMIPSIISTFVSTIKDTTLGYVINVPDLTFAASQVNNQLLTQPFQ 199

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + LI   +Y ++   +  F NRL   I  + 
Sbjct: 200 VFLILAIVYFAICWTLTYFANRLERSITRRR 230



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+   +  A  +  L    RLS + L+ W     V   R +P L++I + Y
Sbjct: 26  LGGLANTLILSALSIALAFPVSILFALARLSRSPLLRWPVTALVYFTRGVPLLMLILWSY 85

Query: 150 KSVL 153
             V 
Sbjct: 86  FLVP 89


>gi|319782289|ref|YP_004141765.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168177|gb|ADV11715.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 359

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 14/221 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     IFV + ++G  L++    L R       +   L      +I G+ +L LI+
Sbjct: 150 WGGLALTLFIFVTTCLIGFPLAICLALLRRSELPWISRTTGL------IIDGVRSLPLIS 203

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +      P       +       +   + +  + + +A+ AEIVR G+  V  GQ EA
Sbjct: 204 ILFTFAVVLP-----FALPQWLQGDKLYRVILGSALFFSAYQAEIVRGGMQGVATGQEEA 258

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+ALG+ + +    +LLPQAMR+ +P   +Q++   K +SL V VGF ++++ G      
Sbjct: 259 AMALGMRYWQRISRILLPQAMRNAMPATINQFVISFKETSLVVIVGFFEILASGNAAYGT 318

Query: 360 ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                  +E+     FIY      ++ +   L  ++++ E+
Sbjct: 319 GEWRFAYVEVYAFIAFIYFIFVFSLSRYGAFLERRMSVSER 359


>gi|218661449|ref|ZP_03517379.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli IE4771]
          Length = 222

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 13/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ +   VLG  L      L+R       +A+   Y+  F   G P L+ +   + 
Sbjct: 21  WMTIKLTIICIVLGCSLGFLVG-LARTSRNLALRAIAGTYVEFF--RGTPVLIQL---FW 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F  P+L                S  IAL+ Y  A  +E  R+ L ++ R Q++A +AL
Sbjct: 75  IFFCLPLLLGVEL-------SNLASGVIALTLYMGAITSETFRASLKSIGREQLDACVAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL  R     V+LPQA+   +P L S  ++L K S+L  AVG ADL+ VG  I N T + 
Sbjct: 128 GLPQRVRVVNVVLPQAVLRAVPTLLSNCVSLFKESALVSAVGMADLMFVGQNISNNTARP 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +E++ +   IY  ++  +   ++ +  +I
Sbjct: 188 VEVLTVVALIYFVIAFPLTRAVSLVEGRI 216



 Score = 54.6 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 33/66 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L+G   T  L    ++    +G LVG  R S N  +  I   YVE FR  P L+ +F+
Sbjct: 15  ALLLGLWMTIKLTIICIVLGCSLGFLVGLARTSRNLALRAIAGTYVEFFRGTPVLIQLFW 74

Query: 148 LYKSVL 153
           ++  + 
Sbjct: 75  IFFCLP 80


>gi|213691640|ref|YP_002322226.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523101|gb|ACJ51848.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457727|dbj|BAJ68348.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 219

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 14/233 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      R   F          I VF  +L + + L              + +  +YI
Sbjct: 1   MTFDWSFVQRYAPFFVNGTLMTLFISVFGILLAVAVGLV-CAGVEIARIPVARQIVRIYI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P LV +   Y L+F  P L          V        + L     +++AE 
Sbjct: 60  E--LSRNTPLLVQL---YFLYFGLPKL--------GVVWSAETCAIVGLGFLGGSYMAEA 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL AVP  Q E A  LGLT  +    V+LPQA+ + IP + +  + L K SS+  A+
Sbjct: 107 MRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVSAI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             AD++ +   +I       E + + +  YL + + I++F   L  +     +
Sbjct: 167 ALADVMYMAKDLIGMYYSTYESLFMLIVAYLVILLPISIFGTWLERRFDYGRR 219



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 40/78 (51%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA   + G + T +++  G++ A  +G +     ++   +   I R+Y+E+ R
Sbjct: 4   DWSFVQRYAPFFVNGTLMTLFISVFGILLAVAVGLVCAGVEIARIPVARQIVRIYIELSR 63

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV ++FLY  +  +
Sbjct: 64  NTPLLVQLYFLYFGLPKL 81


>gi|296106040|ref|YP_003617740.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila 2300/99 Alcoy]
 gi|295647941|gb|ADG23788.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 197

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 19/209 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       +   +LG +LS+   +         G A  ++     ++ G P ++ ++  Y
Sbjct: 1   MQLLTGGMLIGVLLGTLLSICRHQ---------GVACFVINRFISILRGTPLILQLSFIY 51

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  PVL               ++  +A    ++A+ AEI+R+G+ ++P+GQ EAA+ 
Sbjct: 52  ---FAVPVLLGM-------RPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALT 101

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L +      + ++LPQ +++I P + ++ + LLK ++L   +G  DL+    T+  Q   
Sbjct: 102 LQIPTFYLWKDIILPQVIKNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFT 161

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + I  F Y SL +++     ++  +
Sbjct: 162 YFMPLCITGFYYYSLVLLLEALGKKIEKR 190


>gi|238759069|ref|ZP_04620239.1| Histidine transport system permease protein hisM [Yersinia aldovae
           ATCC 35236]
 gi|238702746|gb|EEP95293.1| Histidine transport system permease protein hisM [Yersinia aldovae
           ATCC 35236]
          Length = 154

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 63/137 (45%)

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           N +  +          +AL+  T A+  EI    + AVP G++EAA A G +  K  R +
Sbjct: 7   NDLLNAFFRSGLNCTILALTLNTCAYTTEIFAGAIRAVPHGEIEAARAYGFSRFKLYRCI 66

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LP A+R  +P  +++ + +L +++LA      D++ +   I   T Q      I   +Y
Sbjct: 67  ILPSALRIALPAYSNEVILMLHSTALAFTATVPDILKIARDINAATYQPFYAFGIAAVLY 126

Query: 375 LSLSIMIALFMNRLNAK 391
           L +S  +     +   +
Sbjct: 127 LIISYTLISLFRQAEKR 143


>gi|152971236|ref|YP_001336345.1| histidine and lysine/arginine/ornithine transport system ABC
           transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238895827|ref|YP_002920563.1| histidine transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|150956085|gb|ABR78115.1| histidine and lysine/arginine/ornithine transport system (ABC
           superfamily, membrane) [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238548145|dbj|BAH64496.1| histidine transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 228

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L A   ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGL-AGAGAKLSSNRPLALVFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNSVTDALGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  +  +  K+
Sbjct: 192 YFAIVCGLIYLVFTTVSNGVLLLLERRYTVGVKR 225



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL G + T  LA S ++ A +IG      +LS+N+ +A +   Y  + R +P LV+
Sbjct: 5   FSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLSSNRPLALVFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|119383547|ref|YP_914603.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373314|gb|ABL68907.1| L-glutamate ABC transporter membrane protein / L-asparagine ABC
           transporter membrane protein / L-glutamine ABC
           transporter membrane protein / L-aspartate ABC
           transporter membrane protein [Paracoccus denitrificans
           PD1222]
          Length = 484

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 19/215 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 S  LG++L+L     +R       K L +++I       L TL+ +A     +F
Sbjct: 285 VAGIALSLPLGVILAL-----ARRSDLPVIKLLAVMFIEFIRGVPLITLLFVASLLLNYF 339

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P           T     + + I ++ + AA++AE++R GL A+P+GQ EAA ALGL 
Sbjct: 340 LPP----------GTNFDIILRVIIMVTLFAAAYMAEVIRGGLAALPKGQYEAADALGLD 389

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---- 362
           + KA RL++LPQA++  IP + S ++ + K+++L V VG  D +      I  + +    
Sbjct: 390 YWKAQRLIILPQALKISIPGIVSTFIGMFKDTTLVVFVGLFDPLKAMADTIRASFEWKGA 449

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             E  +    I+  L   ++ +   L  ++    +
Sbjct: 450 YWEPYIFVGAIFFILCFGMSRYSMYLERRLKRDHR 484


>gi|294636990|ref|ZP_06715312.1| arginine ABC transporter, permease protein ArtM [Edwardsiella tarda
           ATCC 23685]
 gi|291089818|gb|EFE22379.1| arginine ABC transporter, permease protein ArtM [Edwardsiella tarda
           ATCC 23685]
          Length = 222

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 86/183 (46%), Gaps = 4/183 (2%)

Query: 217 KALPLLYISTFLIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           + L LL      +F G P LV I L Y        + +  ++  +   P ++   +AL+ 
Sbjct: 42  RGLTLLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRETPWLWSALSQP-WLCAMLALAL 100

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            +AA+  ++    + A+P GQ ++  ALG++  +    +LLP A +  +   +++ + + 
Sbjct: 101 NSAAYSTQLFYGAMRAIPNGQWQSCAALGMSKGQTL-RILLPYAFKRALSSYSNEVVLIF 159

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K++SLA  +   +++     +  +T   + +      +YL ++ ++ L M  +  +    
Sbjct: 160 KSTSLAYTITLMEVMGYAQQLYGRTYDVM-VFGAAGVVYLCVNGLLTLMMRLIERRALAF 218

Query: 396 EKK 398
           E++
Sbjct: 219 EQR 221


>gi|303253105|ref|ZP_07339254.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248741|ref|ZP_07530754.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|302647787|gb|EFL77994.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854668|gb|EFM86858.1| Binding-protein-dependent transport system inner membrane component
           family protein [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 219

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +      +    +T+  +    + S V G+++++        +  K    L   
Sbjct: 1   MNWSYVVNAIPLFIDAAIITLQLSFWGILLSLVFGLLIAIVT-----AYQVKPFYGLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   Y                       F    IAL    A+++A
Sbjct: 56  YIE--LSRNTPLLIQLFFLYY-----------GLPKIGIKWDGFTCGIIALVFLGASYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL   +  R V+ PQA    IP + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQAEAAKAIGLNRFQVFRYVIFPQAWAVSIPAIGANVLFLIKETSVIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           AV  A+L+ V   II    +  E + +    YL + + I+L       K
Sbjct: 163 AVAVAELMFVTKDIIGMDYKTNEALFLLFASYLVILLPISLLARHFENK 211



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  L+F G++ + + G L+        K    + R Y+E+ RN P L+ +FFL
Sbjct: 13  FIDAAIITLQLSFWGILLSLVFGLLIAIVTAYQVKPFYGLARGYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 73  YYGLPKIGIK 82


>gi|258545835|ref|ZP_05706069.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Cardiobacterium hominis ATCC 15826]
 gi|258518851|gb|EEV87710.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Cardiobacterium hominis ATCC 15826]
          Length = 238

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 81/215 (37%), Gaps = 8/215 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ +F  ++ +   L A  L +       +     Y  T L+ G+P L+ + L Y 
Sbjct: 19  WVTLELSIFGLLVSLAFGLLAC-LGKMSKNPWLRVPA--YTYTTLVRGVPDLIQLFLIYY 75

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +    +     A++AE  R G +A+P+GQ+EAA A 
Sbjct: 76  GGQYLLNALAEKLGWPHLDMNPLGTGIFVIGFVMGAYMAESFRGGFLAIPKGQIEAARAY 135

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+ +     +  PQ +R  +P L + +L L+KN++L   +G  D+V +           
Sbjct: 136 GLSRKSIFWRISWPQMLRYALPSLGNNWLVLMKNTALVSIIGLQDIVRIANAAARSAQKK 195

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                          +L L+      +  L  + +
Sbjct: 196 DLFAGFWFYGAMAAWFLILTTFSIAILWWLRRRYS 230


>gi|239834625|ref|ZP_04682953.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822688|gb|EEQ94257.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 223

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 14/229 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            +   F M                  KI   S VLG+ L +    L R    +       
Sbjct: 1   MMQYTFDMGPVLAAWPALLNGAIQTLKISSISMVLGLALGIVFM-LMRMSSVRVISLTAF 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YI   LI   P LV +   +   F  P L       G T+S E  +  +A++   AA+ 
Sbjct: 60  GYIE--LIRNTPFLVQLFFIF---FGMPSL-------GVTLSAE-QAAILAMTLNCAAYA 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR G+ ++  GQ+EA  ALGL      R ++   A+R++ P L SQ++ ++ NSSL 
Sbjct: 107 AEIVRGGVESIKAGQIEAGKALGLHTFDIYRFIIFRPAIRAVYPALCSQFILMMLNSSLV 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++   +L  VG  I ++T ++ EI  +   IYL+LS   ++ +  +  
Sbjct: 167 ASISAEELTYVGQMIDSETFRSFEIYFVLGVIYLALSQFFSIVLQIIGR 215



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 41/87 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G + T  ++   M+    +G +    R+S+ ++++     Y+E+ RN P LV +
Sbjct: 15  WPALLNGAIQTLKISSISMVLGLALGIVFMLMRMSSVRVISLTAFGYIELIRNTPFLVQL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FF++  + S+             M LN
Sbjct: 75  FFIFFGMPSLGVTLSAEQAAILAMTLN 101


>gi|330430556|gb|AEC21890.1| polar amino acid ABC transporter inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 226

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 10/208 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                        G VL+LFA         K        Y+S F    L  L+L      
Sbjct: 25  QVTLVAIACGIAWGTVLALFA-----VSKLKALNIFAHAYVSLFRSIPLIMLLL-----W 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                P +    F    ++    +S  +A S   AAF AEI+R+G++ + RGQ  AA +L
Sbjct: 75  FFLIVPQVLTAVFDLSPSIDIRLVSAMVAFSLLEAAFFAEIIRAGILGLSRGQFYAARSL 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R ++LPQA ++++P + +Q + + +++SL   +   D      +I  + G  
Sbjct: 135 GMTPYQTMRYIILPQAFKAMLPIMLTQCIVIFQDTSLVYVIALGDFFRNAVSIGERDGTL 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I+++L    +Y  +   +++ +  +  +
Sbjct: 195 IQMLLFAGLVYWVICSTLSIVVKMVQQR 222



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + +G   T  +    +      GT++    +S  K +      YV +FR+IP ++++ + 
Sbjct: 16  LFIGARITLQVTLVAIACGIAWGTVLALFAVSKLKALNIFAHAYVSLFRSIPLIMLLLWF 75

Query: 149 YKSVLSV 155
           +  V  V
Sbjct: 76  FLIVPQV 82


>gi|304395378|ref|ZP_07377261.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304356672|gb|EFM21036.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 222

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V +   G+ L +    L         +   L  I   LI   
Sbjct: 11  WPYWPELLSGLWVTLQLTVLATTGGVALGIAGAALRSGKPSWMSR---LWGIYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPALGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT  +    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLTRSQTFLRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I ++T  + E+ L+   IYL+LSI +   +  +  K
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLIYLALSIAMRHLLLAIGRK 215



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G   T  L          +G    A R      ++ +  +YVE+ 
Sbjct: 5   LNFPALWPYWPELLSGLWVTLQLTVLATTGGVALGIAGAALRSGKPSWMSRLWGIYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPALGLKLTAGEAALLAMLIN 100


>gi|222082604|ref|YP_002541969.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727283|gb|ACM30372.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 257

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 98/255 (38%), Gaps = 15/255 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +   F    +L+ L +     +L   +       +   + +  +         LG++L +
Sbjct: 15  LPWLFGALIILAALWLLADLSLLSTLIEWLPYLGTGFLMNILISLLAMAGGTTLGVILGI 74

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                      K  +   + Y+  F     P LVLI     +        +    G    
Sbjct: 75  LELA-----PLKIVRYPVVFYVQVF--RNAPHLVLIFATTYIF-----PFEIVIAGHYLP 122

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P+++   I L+   +A++AEI R  + ++   Q EAA  LG +  +A R ++LPQ  R 
Sbjct: 123 FPDWLKAVIGLAIPASAYVAEITRGAIQSIATTQWEAAKGLGFSRLQALRWIILPQCARR 182

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSLSI 379
            +PP  + + ++   ++LA  VG  +L+           +    +   ++ M  +  L  
Sbjct: 183 SLPPWMNLFASITMGTALASLVGVHELLHAATDASTAVRRLDFTVLAYIVVMTAFFVLCY 242

Query: 380 MIALFMNRLNAKIAL 394
            I+    RL  ++ +
Sbjct: 243 PISSLTRRLERRLKV 257



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 39/85 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  GF+    ++   M   T +G ++G   L+  K+V +    YV+VFRN P LV+
Sbjct: 43  WLPYLGTGFLMNILISLLAMAGGTTLGVILGILELAPLKIVRYPVVFYVQVFRNAPHLVL 102

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           IF         + I  H +  P  +
Sbjct: 103 IFATTYIFPFEIVIAGHYLPFPDWL 127


>gi|190895199|ref|YP_001985492.1| nopaline ABC transporter permease [Rhizobium etli CIAT 652]
 gi|190700860|gb|ACE94942.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 221

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 7/223 (3%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  +    + +     +F  S +LG +L L    L              +   T +I G
Sbjct: 1   MHGFIDQFVIGLKNTLLVFFLSCMLGTILGLLIAILRNSPRTSIA---ACMRAYTGVIRG 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P L++I L Y              +G       F +   AL+   + + AEI R  + A
Sbjct: 58  VPELLIILLMYFGGTALLT----AAVGRYIEINAFAAGVTALTVVFSGYAAEIFRGAINA 113

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAAIALGL+  +   L+++PQ +   +P   +  ++L+K++SL   VG  D++ 
Sbjct: 114 VAPGQREAAIALGLSRWQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLISVVGLTDVMR 173

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           V           +   L    IYL+L+ +  L    +  + AL
Sbjct: 174 VAYIGAGSLRTPLPFYLAASAIYLTLTSLSLLSFRLVERRYAL 216



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 30/65 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            ++G  NT  + F   +  TI+G L+   R S    +A   R Y  V R +P L++I  +
Sbjct: 8   FVIGLKNTLLVFFLSCMLGTILGLLIAILRNSPRTSIAACMRAYTGVIRGVPELLIILLM 67

Query: 149 YKSVL 153
           Y    
Sbjct: 68  YFGGT 72


>gi|253689165|ref|YP_003018355.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251755743|gb|ACT13819.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 229

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 87/228 (38%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L    +T++  A   V +  +G++ +      +R                T LI 
Sbjct: 5   YSQLILDGAIMTLELAASSLVLALAIGLIGASAKLSSNRLLAGCFS-------CYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +            +            +  I L     A+  E  R   +
Sbjct: 58  GIPDLVLMLLIFYGLQIVLNGVTESMGVAQIDIDPLTAGIITLGFIYGAYFTETFRGAYL 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + +  +LK ++L   +G  D++
Sbjct: 118 AVPRGQIEAAVAFGFSPMKVFRRILFPSMMRFALPGIGNNWQVILKATALVSLLGLNDVI 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                      +     L+   +YL  + +    +  L    +   KK
Sbjct: 178 KATQLAGKGAHEPFYFALVAGAMYLIFTTISNGVLWWLERHYSQGVKK 225



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  IL G + T  LA S ++ A  IG +  + +LS+N+L+A     Y  + R IP LV+
Sbjct: 5   YSQLILDGAIMTLELAASSLVLALAIGLIGASAKLSSNRLLAGCFSCYTTLIRGIPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|154245547|ref|YP_001416505.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154159632|gb|ABS66848.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 227

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 14/219 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F     N         +     + V S + G +L      + R +     +   + Y+
Sbjct: 3   YEFDFSFLNEYWPDLLNGVWLTLGMTVASVLPGFILGTL-CAVGRLYGPPYVQRAVVFYV 61

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                       LI   + L F   VL       G+ + P F +  IAL     A+ AEI
Sbjct: 62  EAIRNTP-----LIIQVFWLFFGLAVL-------GAKIGP-FPAAVIALVVNVGAYTAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G  ++P+GQ+EAA  L LT  +A   V LPQA+  + P L SQ++ ++  +++   +
Sbjct: 109 MRAGFRSIPKGQIEAAHCLALTPTQALWSVQLPQAVERVYPALVSQFVLMMLATAIMSQI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
              +L  V   I + T +  E+ L+   IYL+++ ++ L
Sbjct: 169 SAEELTGVAYMIQSFTFRGFEVYLVIAVIYLAMASLLRL 207



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 36/75 (48%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++  + Y   +L G   T  +  + ++P  I+GTL   GRL     V      YVE  R
Sbjct: 6   DFSFLNEYWPDLLNGVWLTLGMTVASVLPGFILGTLCAVGRLYGPPYVQRAVVFYVEAIR 65

Query: 138 NIPPLVVIFFLYKSV 152
           N P ++ +F+L+  +
Sbjct: 66  NTPLIIQVFWLFFGL 80


>gi|300313150|ref|YP_003777242.1| glutamate/aspartate ABC transporter permease [Herbaspirillum
           seropedicae SmR1]
 gi|300075935|gb|ADJ65334.1| ABC-type glutamate/aspartate transport system, permease component
           protein [Herbaspirillum seropedicae SmR1]
          Length = 249

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 12/242 (4%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
                    + P G+   +  L+    T+ T A  ++ + +LG +         R   + 
Sbjct: 4   NWNWGIFWEMSPDGIPYIDTLLAGLKWTLATAACAWIMALILGTIFGTL-----RTTTKP 58

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE--FMSLYIA 272
               +   Y+  F    +P LV + L Y   F  P L            P+  F++  +A
Sbjct: 59  WVVRIANGYVELF--RNIPLLVQMFLWY---FVMPELLPAFIGDWIKSLPDASFVTATLA 113

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  +T++ +A  V +G+ A+PRGQ  A  ALGLT  +  R VLLP A R IIP LT+++ 
Sbjct: 114 LGFFTSSRVAVQVTTGIQALPRGQRMAGAALGLTPVQTYRYVLLPMAFRIIIPALTNEFA 173

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++KNSS+A+ +G  +L +   ++   T Q  E +     IY+ +S++       L    
Sbjct: 174 AIIKNSSVALTIGLVELTAATYSMREFTFQTFEALTGATIIYVIISVIALFMARLLEKVT 233

Query: 393 AL 394
           A+
Sbjct: 234 AV 235



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 61/157 (38%), Gaps = 10/157 (6%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G   T   A    I A I+GT+ G  R +    V  I   YVE+FRNIP LV
Sbjct: 19  PYIDTLLAGLKWTLATAACAWIMALILGTIFGTLRTTTKPWVVRIANGYVELFRNIPLLV 78

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            +F  Y  +  +LP      +         + L   +    T A  F  S  + + ++  
Sbjct: 79  QMFLWYFVMPELLPAFIGDWI---------KSLPDASFVTATLALGFFTSSRVAVQVTTG 129

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              L R      G AL L  + T+    LP    I +
Sbjct: 130 IQALPR-GQRMAGAALGLTPVQTYRYVLLPMAFRIII 165


>gi|291302058|ref|YP_003513336.1| ectoine/hydroxyectoine ABC transporter permease EhuC
           [Stackebrandtia nassauensis DSM 44728]
 gi|290571278|gb|ADD44243.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Stackebrandtia nassauensis DSM 44728]
          Length = 246

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 16/221 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           L      +     I V   VLG + +L   F   L         + +    I  F   G 
Sbjct: 7   LQNSWDQLLEGLWITVLVTVLGCLGTLVISFILGLMAGSKNIATRGVARTIIEFF--RGT 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +V +   +   F  P++ +  F     V        + L+    A+ +EIVR  + AV
Sbjct: 65  SLVVQL---FWFVFAMPIMFKVKFDSVIAV------GIVVLALNYGAYGSEIVRGAINAV 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q EA +AL  T  +   LV++PQA   ++PP ++  + +LK S+L   +G  DL   
Sbjct: 116 PKAQWEACVALNFTFWQKLSLVIIPQAWVGMVPPFSNLAIQVLKGSALVSLIGLVDLTLA 175

Query: 353 GGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +  +     AI I    + IY  +S +IA  M  L  +
Sbjct: 176 AQQLRTKASAEGAIVIFAALLVIYFIMSFLIAAGMRYLERR 216



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 28/72 (38%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  +   G +   +I  ++G    S N     + R  +E FR    +V +
Sbjct: 11  WDQLLEGLWITVLVTVLGCLGTLVISFILGLMAGSKNIATRGVARTIIEFFRGTSLVVQL 70

Query: 146 FFLYKSVLSVLP 157
           F+   ++  +  
Sbjct: 71  FWFVFAMPIMFK 82


>gi|126736640|ref|ZP_01752380.1| amino acid ABC transporter, permease protein [Roseobacter sp. CCS2]
 gi|126713953|gb|EBA10824.1| amino acid ABC transporter, permease protein [Roseobacter sp. CCS2]
          Length = 432

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 19/258 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           VI       +    +   +   PF   + +R +    L M         S  LGIVL+L 
Sbjct: 190 VIAAFITWFIGGYIVDAIAPAEPFLEAVASRNMGGFMLNMILGVVCVSLSLPLGIVLAL- 248

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       K + +++I       L TL+ +A      F  P           T  
Sbjct: 249 ----GRQSDMPIIKWICVVFIEFIRGVPLITLLFVANVVLAFFLPP----------GTTF 294

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              + + I ++ ++AA+IAE++R GL A+P+GQ EAA +LGL + +A RL++LPQA++  
Sbjct: 295 DLILRVIIMITMFSAAYIAEVIRGGLAALPKGQYEAADSLGLDYAQAMRLIILPQALKIS 354

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGG----TIINQTGQAIEIILIWMFIYLSLSI 379
           IP + +  + L K++ L   +   DL+ +      +     G   E+ +    ++  +  
Sbjct: 355 IPGIVNVAVGLFKDTVLVSVISMFDLLGMIRGPILSSTEWNGVYWELFMAASVLFFVVCY 414

Query: 380 MIALFMNRLNAKIALKEK 397
            I+ +   L  ++A   +
Sbjct: 415 GISQYSQWLERRLATDHR 432


>gi|219670587|ref|YP_002461022.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219540847|gb|ACL22586.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 221

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 18/233 (7%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              F +           LT+       +FS +LG++ S+        +     K +   Y
Sbjct: 4   NWEFILQNIPLYEKAAWLTLKLAFWGTLFSLLLGLICSVIMY-----YRIPLLKTIMGGY 58

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   L    P L+ +   Y L+F  P L             E     + LS    +++AE
Sbjct: 59  IE--LSRNTPLLIQV---YFLYFGLPKL--------GVTLSETACAILGLSFLGGSYMAE 105

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +R G+ AV + Q+E+ ++LGL+  +  R V+ PQA    IP L +  + LLK +S+  A
Sbjct: 106 ALRGGMEAVSKSQIESGLSLGLSRWQLIRYVVFPQAFSFSIPALGANCIFLLKETSVLGA 165

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   DL++V   +I    Q +E +L+ +  YL + + ++LF+  L  K+   E
Sbjct: 166 IAILDLMNVTKDLIGMYYQTVESLLMLVVSYLIILLPLSLFLTWLERKVRYAE 218



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LAF G + + ++G +          L+  I   Y+E+ RN P L+ ++FLY  +  +
Sbjct: 22  TLKLAFWGTLFSLLLGLICSVIMYYRIPLLKTIMGGYIELSRNTPLLIQVYFLYFGLPKL 81

Query: 156 LPIPDHSIVLPFGM 169
                 +     G+
Sbjct: 82  GVTLSETACAILGL 95


>gi|311107899|ref|YP_003980752.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 14 [Achromobacter
           xylosoxidans A8]
 gi|310762588|gb|ADP18037.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 14
           [Achromobacter xylosoxidans A8]
          Length = 229

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 16/221 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +    +   +LG V+ +  +   R  H+       LL +   ++ G 
Sbjct: 14  PFLLKGFWETLKISFVAIIAGSLLGFVIGVIRSYRIRGVHQ-------LLGLYIHILRGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV +   Y  +F  P  G               + +++LS YT+ ++AEIV   + AV
Sbjct: 67  PFLVQL---YIFYFVLPSTGI-----EMLHWDSGTAAFVSLSVYTSCYVAEIVMGAIQAV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ E A+ LGL   +  RLV+LPQAMR I+ P++  Y+ L+K++++   VG  +L   
Sbjct: 119 PRGQTEGAMTLGLRPFQILRLVILPQAMRLIVQPMSGVYVMLIKSTAILSVVGITELTRQ 178

Query: 353 GGT-IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G   II    +++ I  +   IY      +    N L  ++
Sbjct: 179 GEVFIITFPAKSLFIYGMIAAIYFIYCYPLLRLANWLEKRL 219



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 35/76 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  ++F  +I  +++G ++G  R    + V  +  +Y+ + R  P LV ++  
Sbjct: 16  LLKGFWETLKISFVAIIAGSLLGFVIGVIRSYRIRGVHQLLGLYIHILRGTPFLVQLYIF 75

Query: 149 YKSVLSVLPIPDHSIV 164
           Y  + S      H   
Sbjct: 76  YFVLPSTGIEMLHWDS 91


>gi|300172546|ref|YP_003771711.1| glutamine ABC transporter permease [Leuconostoc gasicomitatum LMG
           18811]
 gi|299886924|emb|CBL90892.1| glutamine ABC transporter, permease protein [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 219

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 19/210 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +    + S + G ++ +       +F +  G           +   +  L L+ + + +
Sbjct: 28  VSVISVILSLIFGSIVGIIQFERLPYFSKFVG----------TINNIIRNLPLLLIIFFV 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P +            P F +  IA+S + +A +AEIVR GL +V  GQ E A A G
Sbjct: 78  YFALPKI--------GIHLPIFWATVIAMSTFESAMLAEIVRGGLESVDNGQFEGARANG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L++ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  +++   G  +  Q    I
Sbjct: 130 LSNMQTMIYIVLPQAYKKMIPPIISQLISLVKDTSLALGIVLSEMTYRGQIVYAQNSTYI 189

Query: 365 -EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +++    +Y  L+  ++L     + K+A
Sbjct: 190 VPVLIAITLVYFLLNYGLSLLAKWADHKLA 219



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 33/76 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++   +I + I G++VG  +       +        + RN+P L++IFF
Sbjct: 17  YLLGGLGITVGVSVISVILSLIFGSIVGIIQFERLPYFSKFVGTINNIIRNLPLLLIIFF 76

Query: 148 LYKSVLSVLPIPDHSI 163
           +Y ++  +        
Sbjct: 77  VYFALPKIGIHLPIFW 92


>gi|184157758|ref|YP_001846097.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|294842164|ref|ZP_06786847.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. 6014059]
 gi|183209352|gb|ACC56750.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii ACICU]
          Length = 219

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTG 216
            +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  
Sbjct: 1   MNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYHVRVLNRIAQFYIELS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL +GLP L                              F    I L+  
Sbjct: 61  RNTPLLIQLFFLYYGLPKL------------------------GIKIDGFACGVIGLTFL 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K
Sbjct: 97  GGSYMAEAFRAGLQSVAKGQIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGANCLFLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  +
Sbjct: 157 ESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLEHR 211


>gi|83592338|ref|YP_426090.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575252|gb|ABC21803.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 365

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 14/237 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L  G+F      +     +     +     V  + L +    L R       +     +I
Sbjct: 140 LVGGVFGLRPVDTSQWGGLMLTLVLAYVGIVAALPLGMVL-ALGRRSSMPVVRISCTTFI 198

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +    L + VL      L    P    F+         + +   I ++ + +A++AE+
Sbjct: 199 ELWRGVPLIS-VLFMASVMLPLFLPTGVTFD---------KLLRALIGITLFQSAYMAEV 248

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL A+PRGQ EAA ALGL   ++T L++LPQA++ +IP + + ++ L K+++L + +
Sbjct: 249 IRGGLQAIPRGQFEAASALGLGFWRSTGLIILPQALKLVIPGVVNTFIALFKDTTLVLII 308

Query: 345 GFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D++    + I     +  A+E  +   F +      ++ +   L +K+    +K
Sbjct: 309 GLLDILGTVQSAIVDPAWSRVAVEGYIFAGFCFWIFCFGMSRYSQALESKLHTGHRK 365



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 36/66 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA+ G++ A  +G ++  GR S+  +V   C  ++E++R +P + V+F     
Sbjct: 157 GLMLTLVLAYVGIVAALPLGMVLALGRRSSMPVVRISCTTFIELWRGVPLISVLFMASVM 216

Query: 152 VLSVLP 157
           +   LP
Sbjct: 217 LPLFLP 222


>gi|255262639|ref|ZP_05341981.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Thalassiobium sp. R2A62]
 gi|255104974|gb|EET47648.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Thalassiobium sp. R2A62]
          Length = 432

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 19/258 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +   +    +    IP   I       + +R L    L M         S  +GI L+L 
Sbjct: 190 IAAAVLVWTIGGFIIPSSEITEGAMQSVQSRDLGGFMLNMMLGVTCVSLSLPIGIALAL- 248

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R       K + +++I       L TL+ +A     +F  P              
Sbjct: 249 ----GRQSSMPIIKYICVVFIEFIRGVPLITLLFVASVMLSYFFPPE----------ATV 294

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F+ + I ++ ++AA+IAE+VR GL A+P+GQ EAA +LGL + +A RL++LPQA++  
Sbjct: 295 DLFLRVVIMITIFSAAYIAEVVRGGLAALPKGQYEAADSLGLDYTQAMRLIILPQALKIS 354

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADL--VSVGGTIINQ--TGQAIEIILIWMFIYLSLSI 379
           IP + +  + L K+++L   +   D+  +  G  + +    G   E+      ++  +  
Sbjct: 355 IPGIVNVSVGLFKDTTLVSVISMFDMVGMIRGPILASTEWNGVYWELFAFAALLFFIVCY 414

Query: 380 MIALFMNRLNAKIALKEK 397
            I+ +   L  ++A   K
Sbjct: 415 GISQYSQWLERRLATDHK 432


>gi|85059071|ref|YP_454773.1| arginine transporter permease subunit ArtM [Sodalis glossinidius
           str. 'morsitans']
 gi|84779591|dbj|BAE74368.1| arginine ABC transporter permease component [Sodalis glossinidius
           str. 'morsitans']
          Length = 222

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 87/185 (47%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T    PL+ +   L  G P LV I L Y        L    ++      P ++   +AL
Sbjct: 40  RTPVLAPLVTVYITLFTGTPLLVQIFLIYYGPGQFAGLHAIPWLWQLLSQP-WLCAMVAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++  +A   +L+P A++  +   +++ + 
Sbjct: 99  ALNSAAYSTQLFAGAMRAIPDGQWQSCTALGMSRVQAL-RLLMPFAIKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K++SLA  +   D++     +  +T   + +      IYL ++ ++ L M  L  +  
Sbjct: 158 VFKSTSLAYTITLMDVMGQSQLLYGRTYDVM-VFGAAGIIYLCVNGVLTLLMRSLERRAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 RFEQQ 221


>gi|220923580|ref|YP_002498882.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219948187|gb|ACL58579.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 223

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 14/219 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                     +   +  +G+V+++    L++       + +   
Sbjct: 1   MSYEFEFGEVFAYWPELAAGALHTLVLSSLAMAIGMVVAVLG-ALAKTSGPVWLRWIVDA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   LI   P L+ I + +           F             +  +AL     A+  
Sbjct: 60  YIE--LIRNTPFLIQIFVIF-----------FGLPSAGLRLEPNSAALLALVVNVGAYGI 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++  GQ+EA  +LGL   +  R V+L  A+++I P LTSQ++ L+ NSS+  
Sbjct: 107 EIIRAGIDSIDPGQIEAGKSLGLKPLQIFRYVVLKPAIQAIYPALTSQFILLMLNSSVCS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           A+  ++L +  G I ++  ++ E+ L+   IY +LS+++
Sbjct: 167 AIAASELTAAAGDIQSRNFRSFEVYLVVTGIYFALSVVL 205



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 34/78 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    +Y   +  G ++T  L+   M    ++  L    + S    + WI   Y+E+ R
Sbjct: 6   EFGEVFAYWPELAAGALHTLVLSSLAMAIGMVVAVLGALAKTSGPVWLRWIVDAYIELIR 65

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P L+ IF ++  + S 
Sbjct: 66  NTPFLIQIFVIFFGLPSA 83


>gi|18310307|ref|NP_562241.1| amino acid ABC transporter [Clostridium perfringens str. 13]
 gi|110800931|ref|YP_695975.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           perfringens ATCC 13124]
 gi|18144987|dbj|BAB81031.1| probable amino acid ABC transporter [Clostridium perfringens str.
           13]
 gi|110675578|gb|ABG84565.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium perfringens ATCC 13124]
          Length = 213

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 19/229 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + L    +     T+       + S  LGI++++      R  + K    +  LY+
Sbjct: 1   MNYIITLMPSIIEGLKNTLGVFILTLLLSIPLGIIVAIL-----RLSNIKIVNFISSLYV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ +   +   F  P++              F +  IA +   AA+  EI
Sbjct: 56  --LVMRGTPLLLQLIFIF---FGLPII--------GVSIDRFPAAIIAFTLNYAAYFGEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+  + RGQ EA+  LGL+     + ++LPQ+ +  +P + ++ + L+K++SL   V
Sbjct: 103 FRSGIKDIDRGQFEASKILGLSKWFTFKKIILPQSFKKTLPSIANEVITLVKDTSLVYVV 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +L+  G    N+    + + LI +   L L  ++    NRL  K +
Sbjct: 163 GIGELLRAGKIASNRDASLLPLFLIGIIY-LLLIGILTKIFNRLEKKYS 210



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G  NT  +    ++ +  +G +V   RLS  K+V +I  +YV V R  P L+ + F+
Sbjct: 11  IIEGLKNTLGVFILTLLLSIPLGIIVAILRLSNIKIVNFISSLYVLVMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  +  +    D          LN 
Sbjct: 71  FFGLPIIGVSIDRFPAAIIAFTLNY 95


>gi|15800368|ref|NP_286380.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 EDL933]
 gi|15829947|ref|NP_308720.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. Sakai]
 gi|168752224|ref|ZP_02777246.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758297|ref|ZP_02783304.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764669|ref|ZP_02789676.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767101|ref|ZP_02792108.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4486]
 gi|168777605|ref|ZP_02802612.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779145|ref|ZP_02804152.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4076]
 gi|168786504|ref|ZP_02811511.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC869]
 gi|168802436|ref|ZP_02827443.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC508]
 gi|195939392|ref|ZP_03084774.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809108|ref|ZP_03251445.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4206]
 gi|208815017|ref|ZP_03256196.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822912|ref|ZP_03263230.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4042]
 gi|209397185|ref|YP_002269289.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4115]
 gi|217326418|ref|ZP_03442502.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. TW14588]
 gi|254791818|ref|YP_003076655.1| glutamate and aspartate ABC transporter membrane protein
           [Escherichia coli O157:H7 str. TW14359]
 gi|261224123|ref|ZP_05938404.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257817|ref|ZP_05950350.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291281604|ref|YP_003498422.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O55:H7 str. CB9615]
 gi|12513561|gb|AAG54988.1|AE005244_6 glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. EDL933]
 gi|13360151|dbj|BAB34116.1| glutamate/aspartate transport system permease [Escherichia coli
           O157:H7 str. Sakai]
 gi|187767198|gb|EDU31042.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013879|gb|EDU52001.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002687|gb|EDU71673.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354852|gb|EDU73271.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363462|gb|EDU81881.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365367|gb|EDU83783.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373635|gb|EDU92051.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC869]
 gi|189375565|gb|EDU93981.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC508]
 gi|208728909|gb|EDZ78510.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4206]
 gi|208731665|gb|EDZ80353.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4045]
 gi|208737105|gb|EDZ84789.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4042]
 gi|209158585|gb|ACI36018.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. EC4115]
 gi|209776918|gb|ACI86771.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776920|gb|ACI86772.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776922|gb|ACI86773.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776924|gb|ACI86774.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|209776926|gb|ACI86775.1| glutamate/aspartate transport system permease [Escherichia coli]
 gi|217322639|gb|EEC31063.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O157:H7 str. TW14588]
 gi|254591218|gb|ACT70579.1| glutamate and aspartate transporter subunit, membrane component of
           ABC superfamily [Escherichia coli O157:H7 str. TW14359]
 gi|290761477|gb|ADD55438.1| Glutamate/aspartate ABC transporter, permease protein GltJ
           [Escherichia coli O55:H7 str. CB9615]
 gi|320193060|gb|EFW67700.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. EC1212]
 gi|320638105|gb|EFX07869.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O157:H7 str. G5101]
 gi|320643509|gb|EFX12679.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O157:H- str. 493-89]
 gi|320648844|gb|EFX17471.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O157:H- str. H 2687]
 gi|320654428|gb|EFX22475.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320660110|gb|EFX27640.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664908|gb|EFX32043.1| Glutamate/aspartate ABC transporter permease protein GltJ
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326341404|gb|EGD65196.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. 1044]
 gi|326345816|gb|EGD69555.1| Glutamate Aspartate transport system permease protein GltJ
           [Escherichia coli O157:H7 str. 1125]
          Length = 246

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 5/237 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++A  +G  D+ +    +++ +  A E        Y+ ++  I L M  +  K+ L
Sbjct: 183 SAIASTIGLVDMAAQASKLLDYSAHAWESFTAITLAYVFINAFIMLVMTLVERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMW 99


>gi|91789328|ref|YP_550280.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91698553|gb|ABE45382.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 220

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     + V S ++G+V  + A    R       K     Y+   LI   P 
Sbjct: 13  QWPLLAKGVLWTVGLTVISAMMGVVAGV-AFAWVRSHGAPWLKWGVGTYVE--LIRNTPF 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   +   F  P         G  +SPE ++  IA+    +A+  EI+R+G+ A P+
Sbjct: 70  IVQLFFVF---FGLPA-------AGIKLSPE-VASIIAMVINLSAYATEIIRAGIDATPK 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA++L L   +    V+LP A+R + P L SQ + ++  S++   +   +L     
Sbjct: 119 GQIEAAMSLALNRMQTFVRVVLPPALRKVWPSLVSQIIIVMLGSAVCGQISTEELSYAAN 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I ++  +A E  ++   +YL+L++ +   +N L  + 
Sbjct: 179 LIQSRNFRAFEAYIVATLVYLTLAVGVRQLLNWLGPRF 216



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + S  S    +  G + T  L     +   + G      R      + W    YVE+ 
Sbjct: 5   LDFISVLSQWPLLAKGVLWTVGLTVISAMMGVVAGVAFAWVRSHGAPWLKWGVGTYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPI 158
           RN P +V +FF++  + +    
Sbjct: 65  RNTPFIVQLFFVFFGLPAAGIK 86


>gi|209518289|ref|ZP_03267115.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501309|gb|EEA01339.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 277

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 98/257 (38%), Gaps = 12/257 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P +     +  +   +  +   S      +                N  I V +   G 
Sbjct: 27  TPGVAAALGVLIAAALLWVLSPDSGSHGDTLARFVDWAPTLAHGFALNVLISVGAIATGS 86

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           VL L    L           L  L++  F       LV     Y   +  P   +F+  G
Sbjct: 87  VLGLLIGAL--GLAASWPGRLARLWVQAFRNAPWLVLV-----YFTTYVFPF--EFSVFG 137

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            +   P+++ + +AL+   +A IAE+ R  + ++P  Q EAA +L  +  +    ++LPQ
Sbjct: 138 TTLPFPDWLKVTLALALPASANIAEVFRGAVASIPTTQWEAAGSLAFSRGQILLHIVLPQ 197

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYL 375
            +R ++PP  + Y  +   ++LA  VG  DL+       +   ++   +   L  M I+ 
Sbjct: 198 CVRRMLPPWMNVYAIITMGTALASLVGVHDLIDTAQIASSTVARSSFTVLTYLATMVIFF 257

Query: 376 SLSIMIALFMNRLNAKI 392
           +    I+LF   L  + 
Sbjct: 258 AYCYPISLFTRWLERRF 274


>gi|89899834|ref|YP_522305.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89344571|gb|ABD68774.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 227

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 18/227 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +       +    R LS    T + +A   VF FVLG + ++      RH        
Sbjct: 1   MTYVFEFSDVLAAWPRLLSGLKYTAELSAAGIVFGFVLGTLSAIV-----RHQKLPVLNG 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +  +Y+    I   P LV   L +   F    L       G  +S EF +  +AL+    
Sbjct: 56  IVSVYVEA--IRNTPFLVQAFLVF---FGLSTL-------GIRLSAEFCAA-LALTLNAG 102

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+R+GL A  +GQ+EAA +LG+        V+L  A+  + P LTSQ++ L+ ++
Sbjct: 103 AYTCEIMRAGLDATHKGQIEAAESLGMGWPAIYWHVMLLPAIEKVYPALTSQFVLLMLST 162

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           S+   +   +L  V   + ++T ++ E+ L+   IYL+LS +  +  
Sbjct: 163 SITSQISAEELTGVANIVQSETFRSFEVYLLVGAIYLALSFVFRMIF 209



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L+ +G++   ++GTL    R     ++  I  VYVE  RN P LV  F +
Sbjct: 17  LLSGLKYTAELSAAGIVFGFVLGTLSAIVRHQKLPVLNGIVSVYVEAIRNTPFLVQAFLV 76

Query: 149 YKSV 152
           +  +
Sbjct: 77  FFGL 80


>gi|27382025|ref|NP_773554.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355195|dbj|BAC52179.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 222

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 14/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F       GL           ++ + + VL + + +    L      +  + L L 
Sbjct: 1   MNYTFDFSPVLDGLPDLLWGCAGTLELALSAMVLALAIGIGGVVL------RESRVLALR 54

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++    +  +     +   Y + F  P++       G  + P   +  IAL     A+  
Sbjct: 55  WLVIAFVEAIRNTPFLGQIYFIFFALPLV-------GVRLDPTLTA-IIALGVNGGAYAI 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R G+ ++ +GQ+EA +AL L+  +  RL++L  A+R+I P LTSQ++ L   +S+A 
Sbjct: 107 EIIRGGVQSINKGQVEAGLALSLSRAQVFRLIVLKPALRAIYPSLTSQFIMLTLTTSIAS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A+   +L SVG TI   T ++ E+  +   +Y ++S M+      +NA+ 
Sbjct: 167 AISAYELTSVGQTIETNTFRSFEVYGVVTLLYFAMSWMLMQMFALINARY 216



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 32/67 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  LA S M+ A  IG      R S    + W+   +VE  RN P L  I+F+
Sbjct: 17  LLWGCAGTLELALSAMVLALAIGIGGVVLRESRVLALRWLVIAFVEAIRNTPFLGQIYFI 76

Query: 149 YKSVLSV 155
           + ++  V
Sbjct: 77  FFALPLV 83


>gi|330953425|gb|EGH53685.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 179

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 1/177 (0%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            L L Y   F    +   V +     +      +       G  +   F +  I L+ + 
Sbjct: 3   GLVLTYGGFFARLPIRLYVDLIRGTPVFVLVLAVFYMVPALGWQI-SAFQAGAIGLTLFC 61

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K 
Sbjct: 62  GSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILPTWVNSSTEIVKA 121

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S+L   +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 122 STLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 178


>gi|323162955|gb|EFZ48790.1| general L-amino acid transport system permease protein aapM
           [Escherichia coli E128010]
          Length = 154

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 3/134 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   + +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP
Sbjct: 18  LIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIP 77

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIA 382
            L +  + L K++SL + +G  DL S            G + E  +    IY      ++
Sbjct: 78  GLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPTWLGMSTEGYVFAALIYWIFCFSMS 137

Query: 383 LFMNRLNAKIALKE 396
            +   L  +     
Sbjct: 138 RYSQHLEKRFNTGR 151


>gi|238762601|ref|ZP_04623571.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
 gi|238699246|gb|EEP91993.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
          Length = 231

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 2/193 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + + F  +  + +   Y  T L+ G+P LV++ L +                G   
Sbjct: 32  LINAVIKLFGPRWLRWISTGY--TTLVRGIPELVIMLLLFFGGEMLVNGFLGLLGLGPVR 89

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F+S  +A+     A+  E  R     V RGQ+EAA+A G+   +  R ++LPQ +  
Sbjct: 90  FNTFISGVLAIGIVFGAYYTETFRGAFQTVDRGQLEAAMAYGMRPSQVFRRIMLPQMLSF 149

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            IP + + +L L+K S+L   +G  D+V +       T +      +   IY+ ++ + +
Sbjct: 150 AIPGINNNWLGLMKASALISILGLEDMVWLAEQAGRATQKPFLFYFLVAMIYMVITALSS 209

Query: 383 LFMNRLNAKIALK 395
              + L  + AL 
Sbjct: 210 WGFSLLARRYALS 222


>gi|238897255|ref|YP_002922932.1| polar amino acid ABC transporter permease [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229465010|gb|ACQ66784.1| polar amino acid ABC transporter permease [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 225

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 105/229 (45%), Gaps = 9/229 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +   N          D        +  + I+  + ++ L   +      +  +   
Sbjct: 1   MDFSVISENWRYLLCGAYPDGPIGGAALTLWISILAGIASSVLGVIWGIGLALSRGICSG 60

Query: 225 STFLIFGLP-TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
               + G    + +I L + ++F  P+   ++        P+  ++   L+  T+A++A 
Sbjct: 61  ILSAVLGFFRAIPVIMLIFWIYFLLPIAFGWDI-------PKITTVVCGLALITSAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V+SG++AV +GQ  A ++LGL   +  R ++LPQ +R + P   +Q+++L+K++SLA  
Sbjct: 114 AVKSGIVAVGQGQWSAGLSLGLNSWQILRFIILPQVLRVMFPSFVNQWISLIKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           VG  +L  +   + N+T   ++E+ L    IY  L  ++   +N    K
Sbjct: 174 VGVNELTFLATQVNNRTMVHSMEVFLFVGLIYFILCFILDFSVNYFLKK 222


>gi|226306243|ref|YP_002766203.1| glutamate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
 gi|226185360|dbj|BAH33464.1| glutamate ABC transporter permease protein [Rhodococcus
           erythropolis PR4]
          Length = 226

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 101/214 (47%), Gaps = 2/214 (0%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             T  ++  FS +  +++ +    + R       + L   Y++ F    L TL+L+   +
Sbjct: 15  FWTTIQLTFFSAIGAVIIGVLIAAM-RVSPVPVARFLGTAYVTVFRNTPL-TLILLFCLF 72

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L     V    +          F    + LS YTAAF+ E +RSG+  VP GQ EA  +
Sbjct: 73  GLSQTLGVNLAKSDSPTFLTDNNFRLAVLGLSVYTAAFVCESLRSGINTVPVGQAEAGRS 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+  +  RL++LPQA R++  PL S  + L KNS++A  +G ++  ++   +I     
Sbjct: 133 LGLSFAQNLRLIVLPQAFRAVTAPLGSVLIALTKNSTIAAVIGVSEASALMKKMIENEAA 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  I+   ++ L++ + L   +L+ +  +  
Sbjct: 193 IFVVGGIFAVGFVILTLPMGLIFGKLSKRFEVSR 226



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 47/105 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y   IL  F  T  L F   I A IIG L+ A R+S   +  ++   YV VFRN P  
Sbjct: 5   SKYGDQILEAFWTTIQLTFFSAIGAVIIGVLIAAMRVSPVPVARFLGTAYVTVFRNTPLT 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +++ F    +   L +       P  +  NN  L+   L++ T A
Sbjct: 65  LILLFCLFGLSQTLGVNLAKSDSPTFLTDNNFRLAVLGLSVYTAA 109


>gi|213647380|ref|ZP_03377433.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
          Length = 151

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/149 (30%), Positives = 82/149 (55%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
             +   P   Q             +S  +A S + AA+ +EI+R+G+ ++ RGQ  AA+A
Sbjct: 1   WFYLIVPGFLQNVLGLSPKTDIRLISAMVAFSMFEAAYYSEIIRAGIQSISRGQSSAALA 60

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+TH ++ +L++LPQA R+++P L +Q + L +++SL   +  AD      TI  + G 
Sbjct: 61  LGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFFRTASTIGERDGT 120

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +E+IL    +Y  +S+  +L ++ L  +
Sbjct: 121 QVEMILFAGAVYFVISLSASLLVSYLKKR 149


>gi|148284121|ref|YP_001248211.1| amino acid ABC transporter permease protein [Orientia tsutsugamushi
           str. Boryong]
 gi|146739560|emb|CAM79290.1| amino acid ABC transporter permease protein [Orientia tsutsugamushi
           str. Boryong]
          Length = 208

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 22/200 (11%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F FV+ ++L++     SR    K  K    +YIS F   G P ++ + + Y    
Sbjct: 20  FSAVCFGFVIAVLLTV-----SRMSKYKLLKFGANIYISVF--RGTPLIIQLYVIYF--- 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          +S  F +  +  S  + A++AEI++SG+ +V + Q+EAA+AL + 
Sbjct: 70  ------------SFKLSNVFYAGVLVFSLNSGAYVAEIIKSGINSVDKWQIEAALALNIP 117

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +    + ++LPQA+R IIP L ++ +NLLK SS+   +G  DL+     +   T      
Sbjct: 118 YFYIMKDIVLPQALRKIIPSLVNEVINLLKESSIISVLGGMDLMGRAKILSQATYDFFTP 177

Query: 367 ILIWMFIYLSLSIMIALFMN 386
           ++     Y  L ++++    
Sbjct: 178 MISVALCYYILVLILSFLAQ 197



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +G   T   AFS +    +I  L+   R+S  KL+ +   +Y+ VFR  P ++ ++ +
Sbjct: 8   IALGIPVTLQYAFSAVCFGFVIAVLLTVSRMSKYKLLKFGANIYISVFRGTPLIIQLYVI 67

Query: 149 YKSV 152
           Y S 
Sbjct: 68  YFSF 71


>gi|145637072|ref|ZP_01792735.1| arginine transport system permease protein [Haemophilus influenzae
           PittHH]
 gi|145269726|gb|EDK09666.1| arginine transport system permease protein [Haemophilus influenzae
           PittHH]
          Length = 219

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 6/222 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    LS     + T+  + V S ++   L+LF T L    ++   +A+ L      L  
Sbjct: 1   MFQEYLSVIVQGIPTSLLLTVVSLLIAFCLALFLTFLLSMENKWIKRAVNL---YLTLFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y            +      +S  +    +AL+  +AA+  ++    + 
Sbjct: 58  GTPLLVQFFLIYAGP--GQFQWIIDSSLWYVLSNAWFCAVLALALNSAAYSTQLFHGAVK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K ++LA  +   D++
Sbjct: 116 AIPKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTALASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                +      AI I  I   IYL ++ +  L + +L  K+
Sbjct: 175 GYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216


>gi|27379091|ref|NP_770620.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27352241|dbj|BAC49245.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 219

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R  +          ++ V + + G+V+ + A  ++ +      + L   YI  F     
Sbjct: 7   WRYQNQLIDGAIVTLELTVIAALAGLVIGV-AGAVALNGRITPLRWLVRGYIELF--RNT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P+L+ I + +           F         P F +  +ALS Y  A+  EI+R+GL +V
Sbjct: 64  PSLIQIFIVF-----------FVLPNFGLKLPAFEAAAVALSLYFGAYSVEIIRAGLDSV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q+EA   LGL+  +  R +LLP A+R+  P +TSQ++ LL  +SLA  V   +L  V
Sbjct: 113 PKNQIEAGQCLGLSGWQVFRHILLPPALRNAYPAVTSQFVLLLLGTSLASQVAADELFHV 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            G I ++T ++ E+  +   +Y ++++      
Sbjct: 173 AGFIESRTYRSFEVYAVICAVYFAMAMSFKALF 205



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y   ++ G + T  L     +   +IG             + W+ R Y+E+FRN
Sbjct: 3   FLPLWRYQNQLIDGAIVTLELTVIAALAGLVIGVAGAVALNGRITPLRWLVRGYIELFRN 62

Query: 139 IPPLVVIFFLYKSVLSV 155
            P L+ IF ++  + + 
Sbjct: 63  TPSLIQIFIVFFVLPNF 79


>gi|26990305|ref|NP_745730.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida KT2440]
 gi|148547399|ref|YP_001267501.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida F1]
 gi|24985259|gb|AAN69194.1|AE016554_1 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|148511457|gb|ABQ78317.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida F1]
 gi|313498469|gb|ADR59835.1| Polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida BIRD-1]
          Length = 239

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 2/227 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L    F +                + +    +G+ L L    L+    ++  +A    + 
Sbjct: 5   LSLLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVV-ALAARSRKRLPRAWATTFS 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F       L L+ + Y        +       G  +   F++  IA S   AAF +EI
Sbjct: 64  TVFRGL-PELLTLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
             +    +P+GQ+EA  ALGL+ R     VLLPQ  R  +P L++ +L+LLK++SL   +
Sbjct: 123 WLAAFKTLPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL+      ++ T + +    +    YL  + +       +  +
Sbjct: 183 SLVDLMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERR 229



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L G + T  LA + +     +G +V     S  +L       +  VFR +P L+ 
Sbjct: 15  WGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLPELLT 74

Query: 145 IFFLYKS 151
           +  +Y  
Sbjct: 75  LLIIYYG 81


>gi|259908948|ref|YP_002649304.1| arginine transporter permease subunit ArtM [Erwinia pyrifoliae
           Ep1/96]
 gi|224964570|emb|CAX56083.1| Arginine transport system permease protein [Erwinia pyrifoliae
           Ep1/96]
 gi|283478954|emb|CAY74870.1| Arginine ABC transport system, inner membrane component [Erwinia
           pyrifoliae DSM 12163]
 gi|310767149|gb|ADP12099.1| arginine transporter permease subunit ArtM [Erwinia sp. Ejp617]
          Length = 223

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L      L  G P LV I L Y      P +   +++      P ++   +ALS  +AA+
Sbjct: 47  LTRGYITLFTGTPLLVQIFLIYYGPGQFPSVQNISWLWSLLSQP-WLCALLALSLNSAAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
              +    + A+P GQ +A  ALG+  +     +LLP A +  +   +++ + + K++SL
Sbjct: 106 TTLLFHGAVRAIPSGQWQACAALGMDRKDQL-RILLPYAFKRALSSYSNEVVLVFKSTSL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A  +   +++  G  +  +T   I +      IYL ++ ++ L M  +  +    E++
Sbjct: 165 AYTITLMEVMGHGQLLYGRTYD-IGVFAAAGVIYLCVNGLLTLLMRLIERRALAFERR 221


>gi|197302609|ref|ZP_03167664.1| hypothetical protein RUMLAC_01338 [Ruminococcus lactaris ATCC
           29176]
 gi|197298507|gb|EDY33052.1| hypothetical protein RUMLAC_01338 [Ruminococcus lactaris ATCC
           29176]
          Length = 228

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + +  LG++++  +    R     T        I  +++ G P ++ + + Y  
Sbjct: 25  LFFVTLLGALPLGLIIAFGSMSHFRPLKYIT-------NIIVWVVRGTPLMIQMLIIYYF 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L   N + G   S  F++  +A     A + + I R G+ +VP+GQ EA + LG
Sbjct: 78  ----PGLVLNNVVWGGGESGRFVAASVAFIFNYACYFSVIYRGGIQSVPQGQTEAGLVLG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--- 361
           +T  +    + L Q ++ I+PP++++ + L+K++SLA  +   +++  G + +  +    
Sbjct: 134 MTKSQIFFKITLMQMIKRIVPPMSNEIITLVKDTSLARIIALQEIIWAGQSFLKGSQGIS 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            AI  +      YL  + ++ + + RL  K+
Sbjct: 194 GAIWPMFFAAVYYLVFNGILTVLLGRLEKKL 224



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 31/60 (51%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VGF+ T  L F  ++ A  +G ++  G +S  + + +I  + V V R  P ++ +  +Y 
Sbjct: 17  VGFLQTLKLFFVTLLGALPLGLIIAFGSMSHFRPLKYITNIIVWVVRGTPLMIQMLIIYY 76


>gi|307609295|emb|CBW98771.1| hypothetical protein LPW_05701 [Legionella pneumophila 130b]
          Length = 215

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 19/209 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       +   +LG +LS+   +         G A  ++     ++ G P ++ ++  Y
Sbjct: 19  MQLLTGGMLIGVLLGTLLSICRHQ---------GVACFVINRFISILRGTPLILQLSFIY 69

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  PVL               ++  +A    ++A+ AEI+R+G+ ++P+GQ EAA+ 
Sbjct: 70  ---FAVPVLLGM-------RPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALT 119

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L +      + ++LPQ  R+I P + ++ + LLK ++L   +G  DL+    T+  Q   
Sbjct: 120 LQIPTFYLWKDIILPQVARNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFT 179

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + I  F Y SL +++     ++  +
Sbjct: 180 YFMPLCITGFYYYSLVLLLEALGKKIEKR 208


>gi|307729013|ref|YP_003906237.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583548|gb|ADN56946.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 225

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 6/211 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M    +I V + + G+        LS   H +  +     Y+S F    L  L+L     
Sbjct: 20  MKITLQITVVAILAGLAWGTVLAVLSLSTH-RALRIFSQAYVSLFRSIPLVMLLL----- 73

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P L +  F   STV    +S   A S   AAF  EI+R+G+ ++PRGQ++A  A
Sbjct: 74  WFFLIVPQLLKALFSLPSTVDLRLVSALTAYSLVEAAFFCEIIRAGIASLPRGQLQAGYA 133

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T R+  R V+LPQA R+++P   +Q + + +++SL   +   D       I  + G 
Sbjct: 134 LGMTSRQTMRYVILPQAFRAMVPLALTQCIVIFQDTSLVYVIALGDFFRRVTAIGERDGT 193

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + ++L+   +Y +++ ++    N +  ++A
Sbjct: 194 IVPMLLVAGAVYWAITSVLIAVTNGVRTRLA 224



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 33/69 (47%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  +    ++     GT++    LS ++ +    + YV +FR+IP ++++ 
Sbjct: 14  DVLLSGMKITLQITVVAILAGLAWGTVLAVLSLSTHRALRIFSQAYVSLFRSIPLVMLLL 73

Query: 147 FLYKSVLSV 155
           + +  V  +
Sbjct: 74  WFFLIVPQL 82


>gi|302560483|ref|ZP_07312825.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           griseoflavus Tu4000]
 gi|302478101|gb|EFL41194.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           griseoflavus Tu4000]
          Length = 216

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 92/231 (39%), Gaps = 18/231 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                              +T+       + SF LG+V +L     +R      G     
Sbjct: 2   KWDWSAVSDFMPYFWDGLLVTLQILVLGSLISFALGLVWALLMRVPTRWVTWPVGAV--- 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T  +   P LV +   + +                       +   A+  + + + 
Sbjct: 59  ----TEFVRNTPLLVQLFFLFYV-----------LPEWGITFSALTTGVFAIGLHYSTYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++ R+G+ AVP GQ EAA AL L  R+    V+LPQA+R ++P L +  +++LK++ L 
Sbjct: 104 MQVYRAGIEAVPVGQWEAATALNLPLRRTWTAVILPQAVRRVVPALGNYVISMLKDTPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +A+   +++        Q  Q  E + +  F ++ +S + +L +  L  ++
Sbjct: 164 MAITVLEMLGEARLFSQQNFQFTEPLTVIGFAFIVISYLASLALRALERRL 214



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 66/206 (32%), Gaps = 7/206 (3%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++ S +      G + T  +   G + +  +G +         + V W      E  R
Sbjct: 4   DWSAVSDFMPYFWDGLLVTLQILVLGSLISFALGLVWALLMRVPTRWVTWPVGAVTEFVR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV-FSFVL 196
           N P LV +FFL+  +              F + L+    +         A     +    
Sbjct: 64  NTPLLVQLFFLFYVLPEWGITFSALTTGVFAIGLHYSTYTMQVYRAGIEAVPVGQWEAAT 123

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            + L L  T  +    +   + +P L      +     L++     ++  +  +  Q NF
Sbjct: 124 ALNLPLRRTWTAVILPQAVRRVVPALGNYVISMLKDTPLLMAITVLEMLGEARLFSQQNF 183

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIA 282
                ++       I  +    +++A
Sbjct: 184 QFTEPLT------VIGFAFIVISYLA 203


>gi|218437715|ref|YP_002376044.1| polar amino acid ABC transporter inner membrane protein [Cyanothece
           sp. PCC 7424]
 gi|218170443|gb|ACK69176.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7424]
          Length = 402

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 71/304 (23%), Positives = 126/304 (41%), Gaps = 19/304 (6%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            +  F  A   +      G +          L+        ++ +++P L     L    
Sbjct: 114 LMILFIFAAICVFFTVTSGLMTSLILWGMLLLLILCAVGGKKLGQSVPSLGTWLGLIWLG 173

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
             ++          F   +    +S   LT+       V SF  G++L+L      R   
Sbjct: 174 TFLIVW-WLLRGGLFLDLVPLSLISGLILTLSVAIVSIVLSFPFGVLLAL-----GRQSS 227

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + L + YI     F L  ++ +A    L    P+                +     
Sbjct: 228 LPVIRWLSIAYIELIRGFPLIGILFMAQV-MLPLVLPL---------GVRPDSIVRAIAG 277

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            + ++AA++AE VR GL +VPRGQ EAA ALGL       L++LPQA++++IP L  Q++
Sbjct: 278 FTLFSAAYLAENVRGGLQSVPRGQTEAAKALGLNPLLVLSLIVLPQALKAVIPTLVGQFI 337

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +L K++SL   VG  DL+ +  +I+      G+ +E+ L   F+Y      ++L   ++ 
Sbjct: 338 SLFKDTSLLAIVGLVDLLGISQSILANPKYQGRNVEVYLFIGFMYWLCCSAMSLASRKIE 397

Query: 390 AKIA 393
            K++
Sbjct: 398 TKMS 401


>gi|29375395|ref|NP_814549.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|255971263|ref|ZP_05421849.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|255973883|ref|ZP_05424469.1| ABC-type amino acid transport system [Enterococcus faecalis T2]
 gi|256617691|ref|ZP_05474537.1| ABC-type amino acid transport system [Enterococcus faecalis ATCC
           4200]
 gi|256761568|ref|ZP_05502148.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256854333|ref|ZP_05559697.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256957329|ref|ZP_05561500.1| ABC-type amino acid transport system [Enterococcus faecalis DS5]
 gi|256959935|ref|ZP_05564106.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|256964361|ref|ZP_05568532.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704]
 gi|257077675|ref|ZP_05572036.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|257081063|ref|ZP_05575424.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|257086160|ref|ZP_05580521.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|257089233|ref|ZP_05583594.1| ABC amino acid transporter permease [Enterococcus faecalis CH188]
 gi|257415374|ref|ZP_05592368.1| ABC-type amino acid transport system [Enterococcus faecalis
           AR01/DG]
 gi|257418408|ref|ZP_05595402.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|257421057|ref|ZP_05598047.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|29342855|gb|AAO80619.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|255962281|gb|EET94757.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|255966755|gb|EET97377.1| ABC-type amino acid transport system [Enterococcus faecalis T2]
 gi|256597218|gb|EEU16394.1| ABC-type amino acid transport system [Enterococcus faecalis ATCC
           4200]
 gi|256682819|gb|EEU22514.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256709893|gb|EEU24937.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|256947825|gb|EEU64457.1| ABC-type amino acid transport system [Enterococcus faecalis DS5]
 gi|256950431|gb|EEU67063.1| ABC-type amino acid transporter [Enterococcus faecalis Merz96]
 gi|256954857|gb|EEU71489.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704]
 gi|256985705|gb|EEU73007.1| ABC-type amino acid transporter [Enterococcus faecalis JH1]
 gi|256989093|gb|EEU76395.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|256994190|gb|EEU81492.1| ABC-type amino acid transport system [Enterococcus faecalis D6]
 gi|256998045|gb|EEU84565.1| ABC amino acid transporter permease [Enterococcus faecalis CH188]
 gi|257157202|gb|EEU87162.1| ABC-type amino acid transport system [Enterococcus faecalis
           ARO1/DG]
 gi|257160236|gb|EEU90196.1| ABC amino acid transporter [Enterococcus faecalis T11]
 gi|257162881|gb|EEU92841.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|295113979|emb|CBL32616.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Enterococcus sp. 7L76]
          Length = 213

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 19/206 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S  LGI+++            K  + L  LYI  +L+ G P L+ +   +  
Sbjct: 21  VFFFTLLGSIPLGIIIAFILQ-----SSFKPLRYLINLYI--WLMRGTPLLLQLIFVF-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P++          V   + +   A     AA+ AEI R G+ A+P+GQ EAA  L 
Sbjct: 72  -YGLPLI--------GIVFERYDAALFAFILNYAAYFAEIFRGGIQAIPQGQYEAAKVLR 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    ++LPQ ++ ++P + ++ +NL+K++SL   +G  DL+  G   +++    +
Sbjct: 123 LTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLRAGKIAMSRD-VTL 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
             + +   IYL  + ++ +   ++  
Sbjct: 182 VPLALVGVIYLLFTAILTVASKKIEK 207



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 40/104 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A++ G   T  + F  ++ +  +G ++     S+ K + ++  +Y+ + R  P L+ 
Sbjct: 7   ILPALVSGAGMTLKVFFFTLLGSIPLGIIIAFILQSSFKPLRYLINLYIWLMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F++  +  +  + +      F   LN              A 
Sbjct: 67  LIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQAI 110


>gi|107022692|ref|YP_621019.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116689641|ref|YP_835264.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105892881|gb|ABF76046.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647730|gb|ABK08371.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 241

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 22/208 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V    LGI ++L              + L L +I  F       + ++ L +  +F  PV
Sbjct: 42  VLGVALGIAMALARG---------PARVLLLAFIGFFR-----AIPVLMLIFWTYFLMPV 87

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   +        P   ++  AL+    A++A  V +G++A   GQ +A ++LGLT  + 
Sbjct: 88  LLHMDV-------PGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLGLTRWQT 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  +   + N+       I L 
Sbjct: 141 VRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFIATQVNNRLMVYPAPIFLF 200

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              IYL L   +      L ++    ++
Sbjct: 201 VALIYLVLCTSLDGGARWLLSRGPRTQR 228


>gi|188534298|ref|YP_001908095.1| arginine transporter permease subunit ArtM [Erwinia tasmaniensis
           Et1/99]
 gi|188029340|emb|CAO97217.1| Arginine transport system permease protein [Erwinia tasmaniensis
           Et1/99]
          Length = 222

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 3/178 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L      L  G P LV I L Y      P +    ++ G    P ++   +ALS  +AA+
Sbjct: 47  LTRGYITLFTGTPLLVQIFLIYYGPGQFPAIQSIPWLWGLLSQP-WLCALLALSLNSAAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
              +    + A+P GQ +A  ALG+  ++    +LLP A++  +   +++ + + K++SL
Sbjct: 106 TTLLFHGAVRAIPSGQWQACAALGMGRKEQL-RILLPYALKRALSSYSNEVVLVFKSTSL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A  +   +++  G  +  +T   I +      IYL ++ ++ L M  +  +    E++
Sbjct: 165 AYTITLMEVMGHGQLLYGRTYD-ISVFAAAGVIYLCVNGLLTLLMRLVERRALAFERR 221


>gi|107026979|ref|YP_624490.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116691824|ref|YP_837357.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105896353|gb|ABF79517.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116649824|gb|ABK10464.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 237

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIALGFALAVPL-AIARASSNRWISGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A      A+  EI    + A   G++EA +A G++
Sbjct: 84  SLQVVHDHVLL-DTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGMAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    ++LP A+R  +P  +++ + +L  ++LA      D++ V   + + T  + + 
Sbjct: 143 RFKLYTRIVLPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +Y  +   +     +L  +
Sbjct: 203 YGIAAVLYAVVVFALIWAFRKLETR 227



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 65/218 (29%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    +     +   +   R S+N+ ++    +
Sbjct: 5   VGQYWQSYLYSDGYR---FSGLAITLWLLVVSIALGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLDTFFRNAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSAGEIEAGMAYGMSRFKLYTRIVLPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAVVVFALIW 219


>gi|293606725|ref|ZP_06689078.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292814875|gb|EFF74003.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 230

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 11/226 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE--KTGKALPLLYISTF 227
           + N R +S  T    T     + +    +VLS+ A       H   +     P+     F
Sbjct: 7   YYNWRIVSQYTGQFATGLANTLIAAGASLVLSVLAGVPLALLHMSHRAAVWRPVAAYVQF 66

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I   P LV I L Y   +  P+L     I G+    E +   +A++ + AA+++EI+R 
Sbjct: 67  -IRSTPLLVQIYLVY---YAVPML-----IPGAKGWSEMVLGIMAMTLHHAAYMSEIIRV 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +VPRGQ+E A A G+ + +  R V+LPQA  + +PPL  Q   L+K++SL   +   
Sbjct: 118 GIESVPRGQIEGAKACGMNYHQRLRYVVLPQAFVNTLPPLLGQTAVLIKDTSLLSLITVF 177

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +LV+ G  + +      E  L     YL +  ++ L    ++  +A
Sbjct: 178 ELVAAGVQMNSDRIVPNESFLTIAAGYLLIYGVMLLLSRGVSHWLA 223



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y      G  NT   A + ++ + + G  +    +S    V      YV+  R+ P L
Sbjct: 14  SQYTGQFATGLANTLIAAGASLVLSVLAGVPLALLHMSHRAAVWRPVAAYVQFIRSTPLL 73

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           V I+ +Y +V  ++P       +  G+      
Sbjct: 74  VQIYLVYYAVPMLIPGAKGWSEMVLGIMAMTLH 106


>gi|15891574|ref|NP_357246.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15160006|gb|AAK90031.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 260

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 11/225 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L +       N  I + +  +G  + +    +      +  +A  L Y+  F     P
Sbjct: 44  QWLPYLAKGFAMNVLISILAIAIGTFIGVVLG-IMELAPYRIVRAPALTYVQIF--RNAP 100

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVLI     +        +    G     P+++   + L+   +A IAEI R  + ++P
Sbjct: 101 HLVLIFAATYIF-----PFEIVAFGNYIPFPDWIKAVVGLAIPASAHIAEITRGAIQSIP 155

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV- 352
             Q EAA  LG +  +  R ++LPQ ++  +PP  + Y ++   ++LA  VG  +L+   
Sbjct: 156 TAQWEAAQGLGFSRNQTLRWIILPQCVKRSLPPWMNLYSSITMGTALASLVGVHELLHAA 215

Query: 353 --GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               T + +    + + L  +  +      ++ F  RL  + A +
Sbjct: 216 TDASTAVQRNDFTVVVYLTVLMAFFLFCYPVSRFTQRLERRFASR 260



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +  GF     ++   +   T IG ++G   L+  ++V      YV++FRN P LV
Sbjct: 44  QWLPYLAKGFAMNVLISILAIAIGTFIGVVLGIMELAPYRIVRAPALTYVQIFRNAPHLV 103

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +IF         +    + I  P  +
Sbjct: 104 LIFAATYIFPFEIVAFGNYIPFPDWI 129


>gi|93005167|ref|YP_579604.1| amino acid ABC transporter permease [Psychrobacter cryohalolentis
           K5]
 gi|92392845|gb|ABE74120.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Psychrobacter cryohalolentis K5]
          Length = 222

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 101/231 (43%), Gaps = 10/231 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + +          +     T+       +    LG VL+L      R    K  +    L
Sbjct: 1   MNMTELATAYPGLMGGMLTTLKVLFLAILGGLSLGTVLALM-----RLSGIKALEIPAKL 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++ F    L  ++L       +F  P++  +       +   F S  +A   + AA+ +
Sbjct: 56  YVNYFRSVPLLLVLL-----WFYFAVPMIYFWVAGKYLQLDTAFTSCVVAFMMFEAAYFS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+VR+G+ ++  GQ+ AA ALG+T+ +  RL++LPQA R ++P +  Q + L ++++L  
Sbjct: 111 EVVRAGIQSIGSGQVNAAKALGMTYGQTMRLIILPQAFRKMLPLILQQCIILFQDTTLVF 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+G  D            G     IL    +Y  +S+  ++ + ++  ++ 
Sbjct: 171 AIGLTDFFRAAYVRGELMGLLTPYILGAGAVYFIISLSASIGVQQVQKRLR 221



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  + F  ++    +GT++   RLS  K +    ++YV  FR++P L+V+ + 
Sbjct: 13  LMGGMLTTLKVLFLAILGGLSLGTVLALMRLSGIKALEIPAKLYVNYFRSVPLLLVLLWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y +V  +        +     F +
Sbjct: 73  YFAVPMIYFWVAGKYLQLDTAFTS 96


>gi|330812508|ref|YP_004356970.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380616|gb|AEA71966.1| putative ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 226

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 14/229 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      +             ++     +LG+ L +    + R ++ +   A+  +
Sbjct: 1   MAYQFDFLPVVQNTELLLRGALFTLELTAIGTLLGVSLGIVG-AVVRAWNIRPFAAIFGV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   LI   P LV +   +           F          E+ +  +A+     A+  
Sbjct: 60  YVE--LIRNTPFLVQLFFIF-----------FGLPSLGLQISEWQAAVLAMVINLGAYST 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A+PRGQ+EAA AL ++  +A R V+L  A+  + P L+SQ + ++  S++  
Sbjct: 107 EIIRAGIQAIPRGQLEAAAALAMSRFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L      I ++  +A E   +   IYL ++++I  F+N +  +
Sbjct: 167 QIATEELSFAANFIQSRNFRAFETYALTTLIYLCMALLIRQFLNWVGRR 215



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 40/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +         +L G + T  L   G +    +G +    R    +  A I  VYVE+ R
Sbjct: 6   DFLPVVQNTELLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWNIRPFAAIFGVYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGLQISEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|167588450|ref|ZP_02380838.1| histidine transport system permease protein [Burkholderia ubonensis
           Bu]
          Length = 237

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 86/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S VLG +L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIVLGFLLAVPL-AIARASSNRWVSGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+   N +  +          +A      A+  EI    + A   G++EA +A G++
Sbjct: 84  SLQVVHD-NVLLDAFFRDAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGLAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    ++LP A+R  +P  +++ + +L  ++LA      D++ V   + + T  +   
Sbjct: 143 RFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFHA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +Y  +   +     +L A+
Sbjct: 203 YGIAAALYAVVVFALIWAFRKLEAR 227



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 68/218 (31%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y      G   T WL    ++   ++   +   R S+N+ V+    +
Sbjct: 5   ISQYWQNYLYTDGYR---FSGLAITLWLLVVSIVLGFLLAVPLAIARASSNRWVSGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + D+ ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHDNVLLDAFFRDAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSAGEIEAGLAYGMSRFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA + Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYMSFHAYGIAAALYAVVVFALIW 219


>gi|298291225|ref|YP_003693164.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927736|gb|ADH88545.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 248

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 7/244 (2%)

Query: 151 SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH 210
               +      +  + +  +  NR +    +T+       + S ++G V +L     SR 
Sbjct: 7   WFKDLYETTGLNFTVFYDPYDWNRYVDGVRMTVVLTVSTILASLLIGAVGALLQGAPSRI 66

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                   + L           P LV I   Y         GQ  F              
Sbjct: 67  VRGAINGFVVL-------FRNTPPLVQIFFFYFGIGAILPAGQDQFGLRQPFIDNVDWAI 119

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IALS +  AF  EI RSG+ AVP+  +EAA ALG T  KA   V+LP A+R  +P L + 
Sbjct: 120 IALSLFAGAFNVEIFRSGIEAVPKTTVEAAEALGYTRLKAYVYVILPLALRVCLPALNNN 179

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +NLLK ++LA A+   + +     I +++    E++L+    Y  L  ++   M+R   
Sbjct: 180 LVNLLKTTTLAYAIAVPETLYAVKQIWSESQNVFEMMLVLFVTYGILVGILVWIMHRWEK 239

Query: 391 KIAL 394
            + +
Sbjct: 240 SLHI 243



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 5/119 (4%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +      L E  G        PY          + G   T  L  S ++ + +IG +   
Sbjct: 4   IPAWFKDLYETTGLNFTVFYDPYD-----WNRYVDGVRMTVVLTVSTILASLLIGAVGAL 58

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
            + + +++V      +V +FRN PPLV IFF Y  + ++LP       L      N   
Sbjct: 59  LQGAPSRIVRGAINGFVVLFRNTPPLVQIFFFYFGIGAILPAGQDQFGLRQPFIDNVDW 117


>gi|115360208|ref|YP_777346.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|172062640|ref|YP_001810291.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|115285496|gb|ABI91012.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
 gi|171995157|gb|ACB66075.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 237

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 87/229 (37%), Gaps = 8/229 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                 ++ +    S   +T+        F F L + L++     +R             
Sbjct: 7   QYWQNYLYTDGYRFSGLAITLWLLVVSIAFGFALAVPLAIARASSNRWISGPV------- 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++ T++  G P  V + + Y   +   V+     +  +          +A      A+  
Sbjct: 60  WLYTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLD-TFFRNAMNCTLLAFVLNECAYAT 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI    + A   G++EA +A G++  K    ++LP A+R  +P  +++ + +L  ++LA 
Sbjct: 119 EIFAGAIKATSAGEIEAGMAYGMSRFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAF 178

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                D++ V   + + T  + +   I   +Y  +   +     +L  +
Sbjct: 179 TATVPDILKVTRDVNSATYMSFQAYGIAAVLYAIVVFTLIWAFRKLETR 227



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 64/218 (29%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y      G   T WL    +     +   +   R S+N+ ++    +
Sbjct: 5   IGQYWQNYLYTDGYR---FSGLAITLWLLVVSIAFGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLDTFFRNAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSAGEIEAGMAYGMSRFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y       I 
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAIVVFTLIW 219


>gi|328555066|gb|AEB25558.1| L-cystine transport system permease protein TcyM [Bacillus
           amyloliquefaciens TA208]
 gi|328913423|gb|AEB65019.1| L-cystine transport system permease protein TcyM [Bacillus
           amyloliquefaciens LL3]
          Length = 235

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 3/219 (1%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVL 237
              T+     + V   + G  ++L      R F  K   A    Y+S F        ++L
Sbjct: 15  MMKTVPLTLAMTVIPIIAGFFIAL-GNITVRVFRIKWLFAFSAFYVSFFRSTPAILHIML 73

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           I L   L  D     +F+    +   P  + + +ALS    A++ EI+RSG++AV  GQ 
Sbjct: 74  IYLGVPLIADH-FSREFHLGWSANQIPVAVFVIMALSLTAGAYMTEILRSGIMAVDTGQA 132

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA ++GLT  +  R V+LPQA    +P  T+  +  L  +S+A  V   ++        
Sbjct: 133 EAAYSIGLTRGQMIRRVILPQAFMISLPNFTNIGIGFLHTTSIAAIVAVPEITGTATIAA 192

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     +E  +    IY  L++++    +    + A  +
Sbjct: 193 SDNYAFLEAFIGAAVIYWGLTLILEAVNSLAEKRAARYQ 231


>gi|330816869|ref|YP_004360574.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           gladioli BSR3]
 gi|327369262|gb|AEA60618.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           gladioli BSR3]
          Length = 241

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + + ++G V        ++    +  + L   Y + F       LV+    +  
Sbjct: 25  MTIVLTLSALLIGSVFGGLVAA-AKLSRFRLLRVLGDCYTTVFR-GVPELLVIYLFYFGG 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F    +A+   + A+ AE+ R+ ++AV RG++EAA A+G
Sbjct: 83  SSLVTTIGQWFGADGFVGVPPFAIGAVAVGMISGAYQAEVYRAAVLAVSRGELEAARAIG 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +    A R +L+PQ +R  +P L + +   LK+S+L    G A+L+         T +  
Sbjct: 143 MPRLTAARRILIPQVLRFALPGLGNVWQLSLKDSALISVTGLAELLRATQVAAGSTHEYF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++        +  A +    K+
Sbjct: 203 LFFVAGGVLYLLMTGASNRIFGKAEAHVGRSFKR 236



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 60/151 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           + + +L+G + T  L  S ++  ++ G LV A +LS  +L+  +   Y  VFR +P L+V
Sbjct: 15  WGSVLLLGALMTIVLTLSALLIGSVFGGLVAAAKLSRFRLLRVLGDCYTTVFRGVPELLV 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I+  Y    S++            + +    +    + M + A          + +S   
Sbjct: 75  IYLFYFGGSSLVTTIGQWFGADGFVGVPPFAIGAVAVGMISGAYQAEVYRAAVLAVSRGE 134

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
              +R        A   + I   L F LP L
Sbjct: 135 LEAARAIGMPRLTAARRILIPQVLRFALPGL 165


>gi|298290397|ref|YP_003692336.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926908|gb|ADH87717.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 238

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 2/232 (0%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L +    +     +      T   + + S  + I++  F   L+         AL  
Sbjct: 1   MFGLDYSWLSDPVYQDWLLRGTLTTIGLALASSAIAILIGAFG-ALALSLRIAWLDALIE 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L++  F     P L ++   + L      +          +   F    ++LS +  A  
Sbjct: 60  LFVELFR-NTPPLLQMLFFYFTLSTIGLRVTDPATGLSVPLLSAFDCALVSLSLFGGALC 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  RSGL ++P    EAA +LG +     R + +P A R  +P LT+   NL K +S A
Sbjct: 119 IEAFRSGLESLPHSVTEAARSLGYSRWARFRRIEMPIASRICLPALTNILTNLFKTTSQA 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+   G I N T +  E++L+ + IY+SL  +++  M+R+   +A
Sbjct: 179 SVITVPELMYYAGQIYNDTFRTAEVMLLVLLIYVSLVSLLSWGMSRIEQALA 230



 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F +D   +   SD  Y   +L G + T  LA +    A +IG             +  + 
Sbjct: 2   FGLDYSWL---SDPVYQDWLLRGTLTTIGLALASSAIAILIGAFGALALSLRIAWLDALI 58

Query: 130 RVYVEVFRNIPPLVVIFFLYK 150
            ++VE+FRN PPL+ + F Y 
Sbjct: 59  ELFVELFRNTPPLLQMLFFYF 79


>gi|256825960|ref|YP_003149920.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
 gi|256689353|gb|ACV07155.1| amino acid ABC transporter membrane protein [Kytococcus sedentarius
           DSM 20547]
          Length = 245

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 89/220 (40%), Gaps = 14/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                       ++ V   ++G V+++    ++             + I  F   G   +
Sbjct: 12  WPRFVDGFWVTVQLSVGGALVGFVVAVVLG-IAASTGTAWLTGPARVIIEFF--RGTSLV 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + +    P +  ++            +  +A      A+ AE+VR  L AVP+G
Sbjct: 69  VQLFFIFYV---IPTVTGYDI-------GSLGTGILAFGLNYGAYGAEVVRGSLKAVPKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E   AL +++  A R V+ PQA   ++P L +  + L+K ++LA  +   D+  V   
Sbjct: 119 QWETTTALSMSYPTALRRVIWPQAWALMLPGLNNLAVMLVKGTALASLILLTDITEVADR 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +T    E   +   +YL++++  + F+  L  +   K
Sbjct: 179 -ARRTMSTYEAFGVAAVLYLAIALAFSAFLRWLEVRAHRK 217



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 32/72 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +     + GF  T  L+  G +   ++  ++G    +    +    RV +E FR    +V
Sbjct: 10  TAWPRFVDGFWVTVQLSVGGALVGFVVAVVLGIAASTGTAWLTGPARVIIEFFRGTSLVV 69

Query: 144 VIFFLYKSVLSV 155
            +FF++  + +V
Sbjct: 70  QLFFIFYVIPTV 81


>gi|307945341|ref|ZP_07660677.1| nopaline transport system permease protein NocQ [Roseibium sp.
           TrichSKD4]
 gi|307771214|gb|EFO30439.1| nopaline transport system permease protein NocQ [Roseibium sp.
           TrichSKD4]
          Length = 237

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 2/203 (0%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S   G+ L  F   ++++  E + K    +Y + F       L L  + Y L  
Sbjct: 27  VSLAITSLPFGLFLG-FIIAVAKNSSEPSLKMAANIYTTIFRGL-PELLTLFMVYYGLQI 84

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                 +            F++  +ALS   +++ +E   S    +P+GQ E   ALGL+
Sbjct: 85  AIREGIRLLGYDVQIDINSFVAGVVALSFVFSSYASEAFLSAFRGIPQGQYEGGYALGLS 144

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H K  RL+++PQ +R  +P L + +L LLK+++L   VG  D++   G     T +    
Sbjct: 145 HTKTMRLIIVPQLIRLALPALGNLWLVLLKDTALVSVVGLEDILREVGVAARNTKEPFLF 204

Query: 367 ILIWMFIYLSLSIMIALFMNRLN 389
             +   +YL L+++ +  ++++ 
Sbjct: 205 FGLACVLYLILAMISSAGLSKIE 227



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 8/156 (5%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G + T  LA + +     +G ++   + S+   +     +Y  +FR +P L+ 
Sbjct: 15  WGDEIAHGVLITVSLAITSLPFGLFLGFIIAVAKNSSEPSLKMAANIYTTIFRGLPELLT 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  +   +            +   +  +   +      A  FVFS        L A
Sbjct: 75  LFMVYYGLQIAIREGIR-------LLGYDVQIDINSFVAGVVALSFVFSSYASEAF-LSA 126

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            R       + G AL L +  T  +  +P L+ +AL
Sbjct: 127 FRGIPQGQYEGGYALGLSHTKTMRLIIVPQLIRLAL 162


>gi|206576837|ref|YP_002237301.1| histidine ABC transporter, permease protein HisQ [Klebsiella
           pneumoniae 342]
 gi|288934235|ref|YP_003438294.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290508438|ref|ZP_06547809.1| histidine transport system permease [Klebsiella sp. 1_1_55]
 gi|206565895|gb|ACI07671.1| histidine ABC transporter, permease protein HisQ [Klebsiella
           pneumoniae 342]
 gi|288888964|gb|ADC57282.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777832|gb|EFD85829.1| histidine transport system permease [Klebsiella sp. 1_1_55]
          Length = 228

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 3/214 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +++ L A   ++    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVLIGL-AGAGAKLSSNRPLALVFEGY--TTLIRGVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+G +EAA A G
Sbjct: 72  LQIALNSVTDALGMAQFDIDPMIAGIITLGFIYGAYFTETFRGAYLAVPKGHIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +  R +L P  MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FSGGQTFRRILFPAMMRYALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   IYL  + +    +  L  +  +  K+
Sbjct: 192 YFAIVCGLIYLVFTTLSNGVLLLLERRYTVGVKR 225



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 37/68 (54%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           ++  IL G + T  LA S ++ A +IG      +LS+N+ +A +   Y  + R +P LV+
Sbjct: 5   FSQVILQGALVTLELALSSVVLAVLIGLAGAGAKLSSNRPLALVFEGYTTLIRGVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|110633916|ref|YP_674124.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110284900|gb|ABG62959.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chelativorans sp. BNC1]
          Length = 237

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 97/209 (46%), Gaps = 2/209 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +   G+    F   L++   E + +    +Y + F       L L  + Y  
Sbjct: 25  VTISLALVTLPFGLAAG-FTVALAKTSEEPSLRLAANIYTTIFRGL-PELLTLFLVFYGA 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 + +      +     F++  +AL    +A+ +E+  S   A+PRGQ E A A+G
Sbjct: 83  QIAVQQITRVLGATATIEINAFVAGIVALGAVFSAYASEVFVSAFRAIPRGQYEGAYAVG 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+ R+  +LV+LPQ +R  +P L++ +L LLK +SL   +G AD++   G     + +A 
Sbjct: 143 LSRRRTMQLVILPQLIRLALPGLSNLWLILLKETSLVSVIGLADILRQTGIAARVSKEAF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               I   +YL LS++ +   + +  +++
Sbjct: 203 LFFGIACLLYLGLSVLSSFAFSAIERRVS 231



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I +G + T  LA   +      G  V   + S    +     +Y  +FR +P L+ 
Sbjct: 15  WGDEIALGVLVTISLALVTLPFGLAAGFTVALAKTSEEPSLRLAANIYTTIFRGLPELLT 74

Query: 145 IFFLYKS 151
           +F ++  
Sbjct: 75  LFLVFYG 81


>gi|311108045|ref|YP_003980898.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 17 [Achromobacter
           xylosoxidans A8]
 gi|310762734|gb|ADP18183.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 17
           [Achromobacter xylosoxidans A8]
          Length = 216

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 8/206 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A  +  + VL I L++ A         +  ++ PL +++  L   +  + L+ L    +F
Sbjct: 15  ALQWTVALVL-IALAIGAPLGLGLALLRGHRSAPLRWLAAALQQLVQGVPLLGLLMFFYF 73

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV             P   ++ +A   YTAAF+ +I   G+ AV   Q EAA  LGL+
Sbjct: 74  GMPVFLGIEV-------PALTAVSVAFIIYTAAFLGQIWYGGIQAVKHEQWEAAACLGLS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+ PQA R  +PP     + L+K +SLA  VGF +L   G      T Q + +
Sbjct: 127 KWHQFRHVIAPQAFRLSLPPTVGFLVQLIKGTSLASVVGFVELARAGQIASAATFQPLLV 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                 +Y +  + + ++   L  + 
Sbjct: 187 YSCVALLYFAACLPLTMWARNLEGRF 212


>gi|257070102|ref|YP_003156357.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560920|gb|ACU86767.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 277

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 18/219 (8%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                T+   A   V +F  G++L+L     +R    +  KA+ + +I  F    +  +V
Sbjct: 73  HGLWGTLKVTALAAVVAFPFGLLLAL-----ARMSRFRLLKAVAVTWIEFFRGIPMLLVV 127

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
              L     F                 P F  L + +   ++A  AE+ R+G+ AV +GQ
Sbjct: 128 YAFLLALPAFG-------------VTFPRFWMLVVPMILVSSAATAEVFRAGIKAVDKGQ 174

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA A+GL+ R +   V+LPQA+R ++P L    + LLK+S+L   V + +L   G T+
Sbjct: 175 HEAADAIGLSRRDSLIYVVLPQAVRLVLPSLILALVTLLKDSTLGYVVSYNELQFQGKTL 234

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++ T   ++  L+   IY+ +++M+      L+A++  +
Sbjct: 235 VSITRYLVQTYLVVSVIYIVINLMLTRVALSLDARMKAR 273



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 35/86 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G   T  +     + A   G L+   R+S  +L+  +   ++E FR IP L+V
Sbjct: 67  YLAFLGHGLWGTLKVTALAAVVAFPFGLLLALARMSRFRLLKAVAVTWIEFFRGIPMLLV 126

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMF 170
           ++    ++ +         +L   M 
Sbjct: 127 VYAFLLALPAFGVTFPRFWMLVVPMI 152


>gi|322508068|gb|ADX03522.1| Putative amino acid transport protein [Acinetobacter baumannii
           1656-2]
 gi|323517650|gb|ADX92031.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 211

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 26/218 (11%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLP 233
           L+   +++ +     +   +  I+++     L+R   F+ +  +  PLL    FL +GLP
Sbjct: 10  LTTLKISIISIILAIIVGLICSILITYHVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLP 69

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L                              F    I L+    +++AE  R+GL +V 
Sbjct: 70  KL------------------------GIKIDGFACGVIGLTFLGGSYMAEAFRAGLQSVA 105

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V 
Sbjct: 106 KGQIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVT 165

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +I    +  E + + +  YL + + +++  + L  +
Sbjct: 166 KDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLEHR 203


>gi|292487795|ref|YP_003530670.1| arginine ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292899025|ref|YP_003538394.1| arginine ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198873|emb|CBJ45983.1| arginine ABC transporter, permease protein [Erwinia amylovora ATCC
           49946]
 gi|291553217|emb|CBA20262.1| Arginine ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
 gi|312171914|emb|CBX80171.1| Arginine ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 223

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 3/178 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L      L  G P LV I L Y      P +   +++      P ++   +ALS  +AA+
Sbjct: 47  LTRGYITLFTGTPLLVQIFLIYYGPGQFPSVQNVSWLWSLLSQP-WLCALLALSLNSAAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
              +    + A+P GQ +A  ALG+  +     +LLP A +  +   +++ + + K++SL
Sbjct: 106 TTLLFHGAVRAIPSGQWQACAALGMDRKDQL-RILLPYAFKRALSSYSNEVVLVFKSTSL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           A  +   +++  G  +  +T   I +      +YL ++ ++ L M  +  +    E++
Sbjct: 165 AYTITLMEVMGQGQLLYGRTYD-IGVFAAAGVVYLCVNGLLTLLMRLIERRALAFERR 221


>gi|190894983|ref|YP_001985276.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700644|gb|ACE94726.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 222

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 13/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ +   VLG  L      L+R       +A+   Y+  F   G P L+ +   + 
Sbjct: 21  WMTIKLTIICVVLGCSLGFLVG-LARASRNLALRAIAGTYVEFF--RGTPVLIQL---FW 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F  P++                S  I L+ Y  A  +E  R+ L ++ R Q++A +AL
Sbjct: 75  IFFCLPLILGVEL-------SNLASGVITLTLYMGAITSETFRASLKSIGREQLDACVAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL  R     V+LPQA+   IP L S  ++L K S+L  AVG ADL+ VG  I N T + 
Sbjct: 128 GLPQRVQVVNVVLPQAVPRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNISNNTARP 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +E++ +   IY  ++  +   ++ +  +I
Sbjct: 188 VEVLTVVALIYFVIAFPLTRAVSLMEGRI 216



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 34/68 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L+G   T  L    ++    +G LVG  R S N  +  I   YVE FR  P L+ +F+
Sbjct: 15  ALLLGLWMTIKLTIICVVLGCSLGFLVGLARASRNLALRAIAGTYVEFFRGTPVLIQLFW 74

Query: 148 LYKSVLSV 155
           ++  +  +
Sbjct: 75  IFFCLPLI 82


>gi|124027567|ref|YP_001012887.1| glutamate/aspartate transport system permease protein [Hyperthermus
           butylicus DSM 5456]
 gi|123978261|gb|ABM80542.1| glutamate/aspartate transport system permease protein [Hyperthermus
           butylicus DSM 5456]
          Length = 228

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +    F +G+++      L  +      +    +     +I G+P LV++ L Y    
Sbjct: 26  LILTFGGFGIGLIVGPLLAFLEVYGPRPLARLAAAV---EEVIRGIPLLVIMFLVY---- 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F             +  +++   + A+ ++I+RS ++++P GQ EAA+ALG++
Sbjct: 79  -------FGLPELGVRLDPLTAAVVSIGIRSLAYQSQIIRSAILSIPAGQWEAALALGMS 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A   V+ PQA R  IP L +Q+   LK++S+A A+G A++ +    +       +  
Sbjct: 132 PLEAFVNVIAPQAFRIAIPGLVNQFTVDLKDTSIAYAIGVAEIFTQSVHVAQIILDYLSP 191

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L    IY  L+   +   + L  ++A+
Sbjct: 192 LLFVGLIYFILTYTASSLASILYRRVAI 219



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 35/77 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +   Y   IL G  NT  L F G     I+G L+    +   + +A +     EV R 
Sbjct: 8   FENLEPYIGVILSGLPNTLILTFGGFGIGLIVGPLLAFLEVYGPRPLARLAAAVEEVIRG 67

Query: 139 IPPLVVIFFLYKSVLSV 155
           IP LV++F +Y  +  +
Sbjct: 68  IPLLVIMFLVYFGLPEL 84


>gi|86357101|ref|YP_468993.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86281203|gb|ABC90266.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 260

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 11/226 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L +       N  I + +  LG V+      L      +     P+ Y     +     
Sbjct: 42  WLPYLASGFLMNVVISLSAMTLGTVVGTIFGIL------QLMPYRPVRYPVVAYVQAFRN 95

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              + L +   +  P   +    G     P+++   I L+   +A++AEI R  ++++P 
Sbjct: 96  APHLVLIFATTYIFPF--EIVVFGNYLPFPDWLKAVIGLAIPASAYVAEITRGAILSIPT 153

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EAA  LG +  +A R ++LPQ +R  +PP  +   ++   +SLA  VG  +L+    
Sbjct: 154 TQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLHAAT 213

Query: 355 TIINQTGQ---AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                  +    I   ++ M  + +L   IA    RL        +
Sbjct: 214 DASTAVRRLDFTIIAYIVVMAAFFTLCYPIARLTRRLEQHFNAGSR 259



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 8/197 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  GF+    ++ S M   T++GT+ G  +L   + V +    YV+ FRN P LV+
Sbjct: 42  WLPYLASGFLMNVVISLSAMTLGTVVGTIFGILQLMPYRPVRYPVVAYVQAFRNAPHLVL 101

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           IF                 ++ FG +L         + +   A  +V     G +LS+  
Sbjct: 102 IFATTYIFP--------FEIVVFGNYLPFPDWLKAVIGLAIPASAYVAEITRGAILSIPT 153

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           T+          ++  L +I             + +   +     +            + 
Sbjct: 154 TQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLHAAT 213

Query: 265 EFMSLYIALSCYTAAFI 281
           +  +    L     A+I
Sbjct: 214 DASTAVRRLDFTIIAYI 230


>gi|257083726|ref|ZP_05578087.1| ABC-type amino acid transport system [Enterococcus faecalis Fly1]
 gi|256991756|gb|EEU79058.1| ABC-type amino acid transport system [Enterococcus faecalis Fly1]
          Length = 213

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 19/206 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S  LGI+++            K  + L  LYI  +L+ G P L+ +   +  
Sbjct: 21  VFFFTLLGSIPLGIIIAFILQ-----SSFKPLRYLINLYI--WLMRGTPLLLQLIFVF-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P++          V   + +   A     AA+ AEI R G+ A+P+GQ EAA  L 
Sbjct: 72  -YGLPLI--------GIVFERYDAALFAFILNYAAYFAEIFRGGIQAIPQGQYEAAKVLR 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    ++LPQ ++ ++P + ++ +NL+K++SL   +G  DL+  G   +++    +
Sbjct: 123 LTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLRAGKIAMSRD-VTL 181

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
             + +   IYL  + ++ +   ++  
Sbjct: 182 VPLALVGLIYLLFTAILTVASKKIEK 207



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 40/104 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A++ G   T  + F  ++ +  +G ++     S+ K + ++  +Y+ + R  P L+ 
Sbjct: 7   ILPALVSGAGMTLKVFFFTLLGSIPLGIIIAFILQSSFKPLRYLINLYIWLMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F++  +  +  + +      F   LN              A 
Sbjct: 67  LIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQAI 110


>gi|257060311|ref|YP_003138199.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 8802]
 gi|256590477|gb|ACV01364.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 8802]
          Length = 401

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T     V SF  GI+L+L      R       + L + YI          L LI + +  
Sbjct: 205 TAIVSIVLSFPFGILLAL-----GRQSSLNVIRWLSIAYIEVIR-----GLPLIGILFMA 254

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P++     +   +     +      + ++AA++AE VR GL +VP+GQ+EAA ALG
Sbjct: 255 QIMLPLI-----LPVGSRPERVIRAIAGFTLFSAAYLAENVRGGLQSVPKGQIEAAKALG 309

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TG 361
           L        ++LPQA++++IP +  Q+++L K++SL   VG  DL+ +  +I+      G
Sbjct: 310 LNPIFVLIFIVLPQALKAVIPSIVGQFISLFKDTSLLAIVGLVDLLGISQSILANPKFIG 369

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +  E+ L    IY      ++    +L  K+
Sbjct: 370 RYGEVYLFIAVIYWIFCYSMSWASRKLEQKL 400



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 69/202 (34%), Gaps = 19/202 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T   A   ++ +   G L+  GR S+  ++ W+   Y+EV R +P + ++F   
Sbjct: 196 FSGLILTLLTAIVSIVLSFPFGILLALGRQSSLNVIRWLSIAYIEVIRGLPLIGILFMAQ 255

Query: 150 KSVLSVLPIPDHS------------IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             +  +LP+                    +       GL          AK    + +  
Sbjct: 256 IMLPLILPVGSRPERVIRAIAGFTLFSAAYLAENVRGGLQSVPKGQIEAAKALGLNPIFV 315

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++  +    L        G+ + L             L ++ L   L   + +L    FI
Sbjct: 316 LIFIVLPQALKAVIPSIVGQFISL-------FKDTSLLAIVGLVDLLGISQSILANPKFI 368

Query: 258 GGSTVSPEFMSLYIALSCYTAA 279
           G       F+++   + CY+ +
Sbjct: 369 GRYGEVYLFIAVIYWIFCYSMS 390


>gi|257455524|ref|ZP_05620756.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK
           [Enhydrobacter aerosaccus SK60]
 gi|257447093|gb|EEV22104.1| ABC glutamate/aspartate transporter, inner membrane subunit GltK
           [Enhydrobacter aerosaccus SK60]
          Length = 223

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 10/232 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + +          +    +T        +    LG +L+L      R    +       L
Sbjct: 1   MNMMELQAAMPGLMGGLWITFKVLFLAIIGGLALGTILALM-----RLSGIRILAVPAKL 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++ F       L+L+ L +  +F  P++         T+   F S  +A   + AA+ +
Sbjct: 56  YVNFFRSVP---LLLVLLWF--YFAVPMVYNLVTGTYLTLDTAFTSCVVAFMVFEAAYFS 110

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ ++ +GQ+ AA ALG+T+ +  R ++LPQA R + P L  Q + L ++++L  
Sbjct: 111 EIVRAGIQSIGKGQVNAAKALGMTYGQTMRFIILPQAFRKMFPLLLQQSIILFQDTTLVF 170

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A+G  D         +  G     IL+    Y  +S+  +  +N L  +  +
Sbjct: 171 AIGLVDFFRASYVRGDLMGLLTPYILLAGAFYFVVSLTASTAVNHLRKRFRM 222



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 3/192 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   TF + F  +I    +GT++   RLS  +++A   ++YV  FR++P L+V+ + 
Sbjct: 13  LMGGLWITFKVLFLAIIGGLALGTILALMRLSGIRILAVPAKLYVNFFRSVPLLLVLLWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y +V  V  +   + +     F +             +  +      +G      A  L 
Sbjct: 73  YFAVPMVYNLVTGTYLTLDTAFTSCVVAFMVFEAAYFSEIVRAGIQSIGKGQVNAAKALG 132

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +T + + L     F       L    + +Q       +G  +F   S V  + M 
Sbjct: 133 -MTYGQTMRFIIL--PQAFRKMFPLLLQQSIILFQDTTLVFAIGLVDFFRASYVRGDLMG 189

Query: 269 LYIALSCYTAAF 280
           L         AF
Sbjct: 190 LLTPYILLAGAF 201


>gi|153941265|ref|YP_001390764.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum F str. Langeland]
 gi|152937161|gb|ABS42659.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. Langeland]
 gi|295318836|gb|ADF99213.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum F str. 230613]
          Length = 221

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 85/182 (46%), Gaps = 10/182 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K   ++  +++S F   G P +  +   Y              +          +  
Sbjct: 46  LKIKVLYSISKIWVSFF--RGTPLIAQLFFLYFGIVQL--------MPSLKNMDAMTAAI 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K S+LA  +G  ++++V  +    + + +E     + IY  +        N L  
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQSEGASSYRFLESFTAVIIIYWIIISAFGYLQNILER 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|296532450|ref|ZP_06895174.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
 gi|296267225|gb|EFH13126.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Roseomonas cervicalis ATCC 49957]
          Length = 226

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 13/183 (7%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +     + L  LY+   ++ G+P LVLI   Y                     P F +  
Sbjct: 53  YGGAFARFLARLYVD--ILRGIPVLVLILFTYY-----------GLALFGINVPAFWAGV 99

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+ +  A +AE +R  + +VP GQMEAA A+GL   +    V+LPQA+R ++PP  + 
Sbjct: 100 IALTAFATAHVAETLRGAVESVPAGQMEAAKAIGLRFPQRLAYVVLPQALRRMLPPWVNT 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L ++K ++L   +G  +L+     ++ +    I+  L     YL ++  IA     L  
Sbjct: 160 GLEVVKGTTLLSVIGVVELLLASQQVMARNYLIIDFYLTAGLFYLVINAAIAQLGAALER 219

Query: 391 KIA 393
           + +
Sbjct: 220 RFS 222


>gi|222106269|ref|YP_002547060.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737448|gb|ACM38344.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 260

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 11/223 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L +       N  I + +  LG VL +    L +    +  +    +Y+  F      
Sbjct: 44  QWLPYLGSGFAMNIVISLSAMTLGSVLGILLGML-QMVPFRLVRYPAAVYVQVFR-NAPH 101

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +++ A  Y   F+  V       G     P+++   + L+   +A+IAEI R  ++++P
Sbjct: 102 LVLIFATTYIFPFEIIV------FGNYLSFPDWVKAMVGLAIPASAYIAEITRGAILSIP 155

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             Q EAA  LG +  +A R ++LPQ +R  +PP  +   ++   +SLA  VG  +L+   
Sbjct: 156 TAQWEAAQGLGFSRWQALRWIILPQCLRRSLPPWMNVLASITMGTSLASLVGVHELLHAA 215

Query: 354 GTIINQTGQ---AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                   +    +   ++ M  + +L   IA    RL  +  
Sbjct: 216 TDASTSVRRLDFTVIAYVVVMAAFFALCYPIARLTRRLERRFK 258



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 8/143 (5%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +  GF     ++ S M   +++G L+G  ++   +LV +   VYV+VFRN P LV
Sbjct: 44  QWLPYLGSGFAMNIVISLSAMTLGSVLGILLGMLQMVPFRLVRYPAAVYVQVFRNAPHLV 103

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +IF                 ++ FG +L+        + +   A  ++     G +LS+ 
Sbjct: 104 LIFATTYIFP--------FEIIVFGNYLSFPDWVKAMVGLAIPASAYIAEITRGAILSIP 155

Query: 204 ATRLSRHFHEKTGKALPLLYIST 226
             +          +   L +I  
Sbjct: 156 TAQWEAAQGLGFSRWQALRWIIL 178


>gi|78063223|ref|YP_373131.1| ABC His/Glu/Gln/Arg/opine transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77971108|gb|ABB12487.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia sp. 383]
          Length = 237

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIALGFALAVPL-AIARASSNRWISGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A      A+  EI    + A   G++EA +A G++
Sbjct: 84  SLQVVHNHVLLD-TFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGMAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    ++LP A+R  +P  +++ + +L  ++LA      D++ V   + + T  + + 
Sbjct: 143 RFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +Y  +   +     +L  +
Sbjct: 203 YGIAAVLYAVVVFTLIWAFRKLETR 227



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 64/218 (29%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    +     +   +   R S+N+ ++    +
Sbjct: 5   VSQYWQSYLYTDGYR---FSGLAITLWLLVVSIALGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + +H ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHNHVLLDTFFRNAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSAGEIEAGMAYGMSRFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y       I 
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAVVVFTLIW 219


>gi|83593587|ref|YP_427339.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83576501|gb|ABC23052.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 232

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 1/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              K+ + +   G+VL L  T L +       +A+   Y   F       +VLI      
Sbjct: 16  MTIKLVLGAVSFGLVLGLIGTTL-KLSRNALARAVGNAYTDLFRGLPELLVVLIMYYGAE 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              + ++     +  +     ++   ++L     A+ +E+ R  ++A+PRG +EAA A G
Sbjct: 75  ALVRWLVNDVLALDVAVSISPYVGGVLSLGLIFGAYASEVFRGAILAIPRGHVEAARAFG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R ++LPQ  R  +P L + +L  LK+++L  A+G  +L+         T    
Sbjct: 135 MGPVLTYRRIILPQVWRVALPGLGNLFLVSLKDTALVSAIGLNELMRSANIAGRSTRDYF 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L   F+YL+++++    +  L  +
Sbjct: 195 TFLLAAAFLYLAMTMVSMAVIALLERR 221



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 33/74 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G   T  L    +    ++G +    +LS N L   +   Y ++FR +P L+V
Sbjct: 6   YGDLLITGAAMTIKLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGLPELLV 65

Query: 145 IFFLYKSVLSVLPI 158
           +  +Y    +++  
Sbjct: 66  VLIMYYGAEALVRW 79


>gi|257487793|ref|ZP_05641834.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 174

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 9/179 (5%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           G     L I  ++     T V + +    +    +  Q +          F +  I L+ 
Sbjct: 4   GGFFARLPIRLYVDLIRGTPVFVLVLAVFYMVPALGWQIS---------AFQAGAIGLTL 54

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  + ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++
Sbjct: 55  FCGSHVSEIVRGALQAIPRGQLEAGKAIGLRFGQSLRYVLLPQAMRQILPTWVNSSTEIV 114

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           K S+L   +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 115 KASTLLSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 173


>gi|187779945|ref|ZP_02996418.1| hypothetical protein CLOSPO_03541 [Clostridium sporogenes ATCC
           15579]
 gi|187773570|gb|EDU37372.1| hypothetical protein CLOSPO_03541 [Clostridium sporogenes ATCC
           15579]
          Length = 221

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 85/182 (46%), Gaps = 10/182 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K   ++  +++S F   G P +  +   Y              I          +  
Sbjct: 46  LKIKVLYSISKIWVSFF--RGTPLIAQLFFLYFGIVQL--------IPSLKNMDAMTAAI 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K S+LA  +G  ++++V  +    + + +E     + IY  +        N L  
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQSEGASSYRFLESFTAVIIIYWIIISAFGYLQNILER 215

Query: 391 KI 392
           K+
Sbjct: 216 KM 217


>gi|261368433|ref|ZP_05981316.1| amino acid ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
 gi|282569524|gb|EFB75059.1| amino acid ABC transporter, permease protein [Subdoligranulum
           variabile DSM 15176]
          Length = 219

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 13/218 (5%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
             L         +F+  LG+V++  +         +       +    ++I G P ++ I
Sbjct: 15  FWLNCQLFGLTLLFAVPLGLVVAFGSM-------NRFAPLRGAVKTFVWIIRGTPLMLQI 67

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            + Y      P L  F     S  S   ++  +A +   A + +EI R G+ AVP+GQ E
Sbjct: 68  LVIY----LGPGLLGFTSPWPSGSSGRLVAAVVAFAINYACYFSEIYRGGIEAVPKGQTE 123

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A   LG+T  +    V L Q ++ I+PP+ ++ + L+K++SLA  +   D++ +      
Sbjct: 124 AGQVLGMTRSQIFFKVTLLQVIKRILPPMGNEIITLVKDTSLANVIANKDIIMMAKEYSA 183

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    I  +      +L     + L    L  ++A   
Sbjct: 184 K--GLIWPLFSTAIFFLVFVGALTLLFGWLEKRLAYFR 219


>gi|186473893|ref|YP_001861235.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184196225|gb|ACC74189.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 250

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP---- 264
           R             YI  F   G P L+ + L Y        LGQF  I  S + P    
Sbjct: 44  RVSPHWLPNRFARAYILVF--RGSPLLIQMFLVYY------GLGQFGVIRESFLWPVLRE 95

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            ++   ++L+  TA + AEI+R GL+AVP GQ+EA  ++GL+     R ++ P A+R  +
Sbjct: 96  PYVCAVLSLALCTAGYTAEIIRGGLMAVPVGQIEAGYSIGLSGFSLLRRIIGPIALRQCL 155

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           P  +++ + L+K+++LA  V   ++  V   II QT +  E+ +    IYL L+ ++
Sbjct: 156 PAYSTEAVLLVKSTALASLVTVWEVTGVAQQIIQQTYRTTEVFICAALIYLFLNFVV 212


>gi|104781754|ref|YP_608252.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95110741|emb|CAK15454.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 239

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 2/227 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L    F +                + +    +G+ L L    L+    ++  +A    + 
Sbjct: 5   LSLLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVV-ALAARSRKRLPRAWATTFS 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F       L L+ + Y        +       G  +   F++  IA S   AAF +EI
Sbjct: 64  TVFRGL-PELLTLLIIYYGCQIAAQKILAALGYPGEVLINTFLAAMIAFSLVFAAFSSEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
                  +P+GQ+EA  ALGL  R     V+LPQ  R  +P L++ +L+LLK++SL   +
Sbjct: 123 WLMAFKTLPKGQLEACSALGLGRRTGFFKVVLPQLARIALPGLSNNWLSLLKDTSLVSTI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL+      ++ T + +    +   +YL  S +       L  +
Sbjct: 183 SLIDLMRQTNLAVSVTKEPMFFYGVACLVYLLFSALSGRVFALLERR 229



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L G + T  LA + +     +G +V     S  +L       +  VFR +P L+ 
Sbjct: 15  WGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLPELLT 74

Query: 145 IFFLYKS 151
           +  +Y  
Sbjct: 75  LLIIYYG 81


>gi|206579704|ref|YP_002237384.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|206568762|gb|ACI10538.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
          Length = 250

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 6/229 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI--STFLIF 230
              L+F              + V+ ++  LF+T L         + +P +      FL F
Sbjct: 1   MFSLAFIRDNFTFILSALPVTLVITLLSLLFSTLLGAALAWVIIRQVPGVQWGAKVFLSF 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAFIAEIVR 286
                VL+ L +  +    +           +        ++   ALS   +A+ AE  R
Sbjct: 61  SRSVPVLVMLYFFFYVWPWIAAGLFGGPQDNMYHYKLSPLVAAVTALSLIFSAYFAETFR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G  AV +GQ EAA ++GL+     R ++ PQA  S +P  TS  ++L+K++SL   +  
Sbjct: 121 AGWNAVDKGQREAAWSIGLSGFTQFRRIIFPQAAVSALPNFTSVLIDLIKDTSLVYTITV 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            DL++       +    +E   + + IY+ L + IA  +  +   +  +
Sbjct: 181 IDLMAKANIAAARGFHFVEAYCVVLVIYIVLCLAIARALRSVERFLRAR 229


>gi|187921004|ref|YP_001890036.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187719442|gb|ACD20665.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 265

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 18/209 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LGIV    A  L    H +       +++  F       ++L+        
Sbjct: 30  LILSVISAALGIVAG-MALALCAVSHTRWLTWPVRVFVDVFRGLPAALVILV-------- 80

Query: 247 DKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              V      IG S   P  +    +AL+  ++A+IAEI RSG+ +V RGQM A  ALG+
Sbjct: 81  ---VGQGLAPIGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRGQMSACQALGM 137

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361
           T+    R V++PQ +R I+P L +Q+++++K+SSL   +G      DL ++G      T 
Sbjct: 138 TYWSGMRYVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIGQNAAVNTA 197

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +  ++    +YL +++ +   +N L+ 
Sbjct: 198 N-LSPLVAAGAVYLLITVPLTHAINHLDR 225



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 4/188 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK- 150
           G VNT  L+        + G  +    +S  + + W  RV+V+VFR +P  +VI  + + 
Sbjct: 25  GLVNTLILSVISAALGIVAGMALALCAVSHTRWLTWPVRVFVDVFRGLPAALVILVVGQG 84

Query: 151 ---SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
                LS+     + + +     +++  ++    +   +      S    + ++ ++   
Sbjct: 85  LAPIGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRGQMSACQALGMTYWSGMR 144

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                +   + LP L      I    +LV          D   +GQ   +  + +SP   
Sbjct: 145 YVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIGQNAAVNTANLSPLVA 204

Query: 268 SLYIALSC 275
           +  + L  
Sbjct: 205 AGAVYLLI 212


>gi|77414369|ref|ZP_00790524.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77159559|gb|EAO70715.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
          Length = 174

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 13/184 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +  H +  + L  ++IS  L+ G+P +VL+ L Y           F             +
Sbjct: 2   KMSHLRLLRYLANIHIS--LMRGIPLMVLLFLIY-----------FGLPFIGIQLDAVTA 48

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +  +  ++A+I+EI+R+ L+AV  GQ EAA ALGL      R +++PQA R  +P L+
Sbjct: 49  SIVGFTMMSSAYISEIIRAALLAVDHGQWEAARALGLKTPTIYRGIIIPQATRIALPSLS 108

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  L+++K SSL   +   D+ +    +       +   ++   IY  +  + A+  +  
Sbjct: 109 NVLLDMVKGSSLTAMITVPDIFNNAKIVGGTYSDYMTAYILVALIYWVICTLYAIIQDWW 168

Query: 389 NAKI 392
             ++
Sbjct: 169 EKRL 172


>gi|289673930|ref|ZP_06494820.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
          Length = 166

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 11/173 (6%)

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +   LI G P  VL+   + +                     F +  I L+ +  + +
Sbjct: 4   IRLYVDLIRGTPVFVLVLAVFYM-----------VPALGWQISAFQAGAIGLTLFCGSHV 52

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 53  SEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 112

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 113 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 165


>gi|269139578|ref|YP_003296279.1| arginine transporter permease subunit [Edwardsiella tarda EIB202]
 gi|267985239|gb|ACY85068.1| arginine transporter permease subunit [Edwardsiella tarda EIB202]
 gi|304559466|gb|ADM42130.1| Arginine ABC transporter, permease protein ArtM [Edwardsiella tarda
           FL6-60]
          Length = 222

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 84/185 (45%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +     PL+     L  G P LV I L Y        +    ++  +   P ++   +AL
Sbjct: 40  RPLILTPLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRDTPWLWSALSQP-WLCAMLAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++  +    +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYSTQLFYGAMRAIPNGQWQSCAALGMSKAQTL-RILLPYAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K++SLA  +   +++     +  +T   + +      +YL ++ ++ L M  +  +  
Sbjct: 158 IFKSTSLAYTITLMEVMGYAQQLYGRTYDVM-VFGAAGLVYLCVNGLLTLMMRMIERRAL 216

Query: 394 LKEKK 398
             E++
Sbjct: 217 AFEQR 221


>gi|163857135|ref|YP_001631433.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii DSM 12804]
 gi|163260863|emb|CAP43165.1| putative inner membrane component of binding-protein-dependent
           transport system [Bordetella petrii]
          Length = 223

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 1/217 (0%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
              +     A   + +    +V+++ AT L        G  L +L  +       P  VL
Sbjct: 1   MNPIFDWAFAWEILPALGSALVITVQATVLGMLLAVVLGLVLAMLRRAPMRWVSAPVAVL 60

Query: 238 IALKYQLHFDKPVLGQFNFIGGS-TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           I           +   F  +  S        +  +AL  + AA+ AE+ R+G+ +VPRGQ
Sbjct: 61  IEFVRSTPLLVQMYFLFYVLPQSGARMSPLATGILALGVHYAAYCAEVYRAGIESVPRGQ 120

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA AL ++  +    V+LPQA+  ++P L +  + + K++ L  A+   +L+     I
Sbjct: 121 LEAATALNMSPWRTAVGVVLPQAIPPVVPALGNYLVAMFKDTPLLSAITVVELLQQSKII 180

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + T +  E + +   ++L LS++ A  + RL A + 
Sbjct: 181 GSATFRYTEPLTLVGLLFLLLSLIAAWGVRRLEAWLK 217


>gi|71737926|ref|YP_274852.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289627188|ref|ZP_06460142.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289648678|ref|ZP_06480021.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|71558479|gb|AAZ37690.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320324043|gb|EFW80126.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320329012|gb|EFW85011.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330868025|gb|EGH02734.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330985343|gb|EGH83446.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 220

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    +   G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWTAREVLWSGFLTSIQCSALAIAAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL            +               F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVLAVFYMVPALGWQI-------------SAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+P GQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 219


>gi|309795478|ref|ZP_07689895.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|308120853|gb|EFO58115.1| ABC transporter, permease protein [Escherichia coli MS 145-7]
 gi|323958406|gb|EGB54112.1| inner membrane transport system [Escherichia coli H263]
          Length = 216

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 17/216 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            +   ++ +F++G    +  T  +R        + +  + +PL+         +P L+  
Sbjct: 5   LSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPE 64

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +      +     QF           F+S  + L  +TAA + E VR+ + ++PRGQ  
Sbjct: 65  KIGMWFKAELDPNIQF-----------FLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKN 113

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KNS++A  +G  D+ +  G +++
Sbjct: 114 AALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLD 173

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  A E        Y+ ++  I L M  +  K+ L
Sbjct: 174 YSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRL 209



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 34/68 (50%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +
Sbjct: 2   TIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPEL 61

Query: 156 LPIPDHSI 163
           LP      
Sbjct: 62  LPEKIGMW 69


>gi|119489534|ref|ZP_01622295.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Lyngbya sp. PCC 8106]
 gi|119454613|gb|EAW35760.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Lyngbya sp. PCC 8106]
          Length = 404

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 129/334 (38%), Gaps = 25/334 (7%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
               Y    +V       L+   ++     G L     +   + +  I  +   +   +P
Sbjct: 77  PSDQYWRLWIV-------LSLICLLAGLTWGILARNVPVLFRQNIVIIISIVCMMMTIVP 129

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS------- 193
             +    L   ++ ++               N       +  +     +++         
Sbjct: 130 VGIPYRILLIGMVLLVVASAWGGKQLSKTQPNLTKWLPFSWFICLIISVWLIGGGLGLES 189

Query: 194 ----FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                  G++L+L  + +S       G  L L   S+  I    ++  I +   L     
Sbjct: 190 VSTNLWGGLMLTLLMSIISILLCFPIGVMLALGRQSSLPIIRFLSIAYIEVIRGLPLITI 249

Query: 250 VLGQFN----FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +         F+         +   + L+ +++A++AE VR GL A+PRGQ+EAA ALGL
Sbjct: 250 LFMGQVLVPLFLPEGMRPDRILRAIVGLTMFSSAYLAENVRGGLQAIPRGQIEAAKALGL 309

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQ 362
           +      LV+LPQA++  IP +  Q+++L ++++L   VG  +L+ +  +I+      G+
Sbjct: 310 STPLTLGLVVLPQALKISIPSIVGQFISLFQDTTLLAIVGLVELLGMSRSILANPKFLGR 369

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             E+ L    +Y     +++    +L  ++  + 
Sbjct: 370 YSEVYLFIGILYWLFCYLMSQASRKLEQQLNTER 403


>gi|145592264|ref|YP_001154266.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum arsenaticum DSM 13514]
 gi|145284032|gb|ABP51614.1| polar amino acid ABC transporter, inner membrane subunit
           [Pyrobaculum arsenaticum DSM 13514]
          Length = 199

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/204 (27%), Positives = 84/204 (41%), Gaps = 12/204 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L      + T   + + SF +G+ L      L R F  K        Y+  F   G
Sbjct: 6   YFDALLSVVGGIPTTMALALLSFAIGMGLGSILL-LVRFFLPKPLSWFASAYVEAF--RG 62

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV I + Y        +G F    G  + P F +  IAL   +AA+ AEI RS + A
Sbjct: 63  TPLLVQIFIIYF------GVGGFLKDYGINIDP-FTAGVIALGLNSAAYQAEIFRSAVQA 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF--ADL 349
           +P  Q   A A      +  R ++LPQA+R  +P L ++ + L+K+SSL   +G    D+
Sbjct: 116 IPVEQYLTAEAYAFGKTQTFRYIILPQALRIALPALMNEMVLLIKDSSLVSVIGVTPPDI 175

Query: 350 VSVGGTIINQTGQAIEIILIWMFI 373
                   ++     E  L    I
Sbjct: 176 FRRADYYASRHFTYFEAYLAAATI 199



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 83  SSYATAILV---GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            +Y  A+L    G   T  LA         +G+++   R    K ++W    YVE FR  
Sbjct: 4   ENYFDALLSVVGGIPTTMALALLSFAIGMGLGSILLLVRFFLPKPLSWFASAYVEAFRGT 63

Query: 140 PPLVVIFFLYKSV 152
           P LV IF +Y  V
Sbjct: 64  PLLVQIFIIYFGV 76


>gi|300313166|ref|YP_003777258.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300075951|gb|ADJ65350.1| ABC-type amino acid transport system, permease protein
           [Herbaspirillum seropedicae SmR1]
          Length = 227

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 95/236 (40%), Gaps = 14/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +      ++   S VLG  +      ++        + L L 
Sbjct: 1   MNYTFDFMSVFANWDRLLMGAWLTIQLSALSIVLGFAVGTL-CAIAGKSRLALVRGLVLA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   +I   P LV + L +           F             +  IAL+    A+  
Sbjct: 60  YVE--IIRNTPLLVQVFLVF-----------FGLASIGWKLSAETAAVIALTVNVGAYTT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++  GQ+EAA  LG++       V+L  A+  + P LTSQ++ L+  SS+  
Sbjct: 107 EIMRAGINSIHPGQIEAAECLGMSRFHVYWHVVLLPAVERVYPSLTSQFILLMLASSITS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +L +    + ++T ++ E+  +    YL LS +       ++    ++++K
Sbjct: 167 QISAEELTATANLVQSETFRSFEVYAVIAVAYLVLSFLFRGAFWAISQIAFVRKRK 222



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 36/78 (46%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S  +    +L+G   T  L+   ++    +GTL      S   LV  +   YVE+ R
Sbjct: 6   DFMSVFANWDRLLMGAWLTIQLSALSIVLGFAVGTLCAIAGKSRLALVRGLVLAYVEIIR 65

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV +F ++  + S+
Sbjct: 66  NTPLLVQVFLVFFGLASI 83


>gi|227517777|ref|ZP_03947826.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227554922|ref|ZP_03984969.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229546661|ref|ZP_04435386.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|229548747|ref|ZP_04437472.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293383501|ref|ZP_06629412.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|293386673|ref|ZP_06631247.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294779832|ref|ZP_06745218.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300859984|ref|ZP_07106072.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307270135|ref|ZP_07551452.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307271415|ref|ZP_07552689.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307276212|ref|ZP_07557342.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307284361|ref|ZP_07564526.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|312901656|ref|ZP_07760926.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312905049|ref|ZP_07764174.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312907119|ref|ZP_07766112.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312951823|ref|ZP_07770714.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|312979302|ref|ZP_07791000.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|227074774|gb|EEI12737.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227175948|gb|EEI56920.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229306140|gb|EEN72136.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|229308228|gb|EEN74215.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|291079135|gb|EFE16499.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|291083890|gb|EFE20853.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294453106|gb|EFG21522.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300850802|gb|EFK78551.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306503301|gb|EFM72553.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306507124|gb|EFM76264.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306511910|gb|EFM80906.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|306513504|gb|EFM82119.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310626896|gb|EFQ10179.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630226|gb|EFQ13509.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310631628|gb|EFQ14911.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311287896|gb|EFQ66452.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311291267|gb|EFQ69823.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315027598|gb|EFT39530.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315030507|gb|EFT42439.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
 gi|315031301|gb|EFT43233.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315035305|gb|EFT47237.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315145197|gb|EFT89213.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
 gi|315148312|gb|EFT92328.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315151625|gb|EFT95641.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315154250|gb|EFT98266.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315154877|gb|EFT98893.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315159961|gb|EFU03978.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315161884|gb|EFU05901.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315166987|gb|EFU11004.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
 gi|315170860|gb|EFU14877.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315172709|gb|EFU16726.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
 gi|315573427|gb|EFU85618.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315576571|gb|EFU88762.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|315581345|gb|EFU93536.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|323479998|gb|ADX79437.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           62]
 gi|327534392|gb|AEA93226.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
 gi|329577681|gb|EGG59109.1| ABC transporter, permease protein [Enterococcus faecalis TX1467]
          Length = 214

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 19/206 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S  LGI+++            K  + L  LYI  +L+ G P L+ +   +  
Sbjct: 22  VFFFTLLGSIPLGIIIAFILQ-----SSFKPLRYLINLYI--WLMRGTPLLLQLIFVF-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P++          V   + +   A     AA+ AEI R G+ A+P+GQ EAA  L 
Sbjct: 73  -YGLPLI--------GIVFERYDAALFAFILNYAAYFAEIFRGGIQAIPQGQYEAAKVLR 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    ++LPQ ++ ++P + ++ +NL+K++SL   +G  DL+  G   +++    +
Sbjct: 124 LTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLRAGKIAMSRD-VTL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
             + +   IYL  + ++ +   ++  
Sbjct: 183 VPLALVGVIYLLFTAILTVASKKIEK 208



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 40/104 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A++ G   T  + F  ++ +  +G ++     S+ K + ++  +Y+ + R  P L+ 
Sbjct: 8   ILPALVSGAGMTLKVFFFTLLGSIPLGIIIAFILQSSFKPLRYLINLYIWLMRGTPLLLQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F++  +  +  + +      F   LN              A 
Sbjct: 68  LIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQAI 111


>gi|254421401|ref|ZP_05035119.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196188890|gb|EDX83854.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 216

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 14/230 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                L+   ++    T  T     +     G+V +L    L R    K    +  LYI 
Sbjct: 1   MDEFTLSRIFINLVIATKWTIILSLIAFVGGGLVGALIT--LMRISSNKLLSRISWLYIE 58

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F                L     +      +         ++  IAL+ YT+AF+ +I 
Sbjct: 59  FF------------QGTPLLLQLFLAFFGFSVVTGINLSPLVAAAIALTAYTSAFLGDIW 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + AVPRGQ +AA A+G  +    RL++LPQA+R  I P     + ++K +SLA  +G
Sbjct: 107 RGSIQAVPRGQWQAASAIGFGYFDQLRLIILPQAVRLAIAPTVGFLVQVIKGTSLASIIG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           F +L      I N T Q++ I  +   IY +L   ++ +  RL  K+A K
Sbjct: 167 FTELSRAASLINNVTLQSLLIFGLAGLIYFALCYPLSTWSQRLEKKLAYK 216


>gi|16800918|ref|NP_471186.1| hypothetical protein lin1851 [Listeria innocua Clip11262]
 gi|16414353|emb|CAC97082.1| lin1851 [Listeria innocua Clip11262]
          Length = 213

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 107/208 (51%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           AK  +  FV+ +V S+    +    +  K      +L I  +++ G P L+ +   Y   
Sbjct: 15  AKTTLLVFVVTLVCSIPLGAIVAVGNISKIAPLKFILNIYIWIMRGTPLLLQLIFIY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P++          V     +++IA     AA+ AEI R G +++  GQ E+A  LGL
Sbjct: 72  YGLPII--------GVVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGL 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G   +++    I 
Sbjct: 124 TYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIP 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++L+   IYL+L+ ++ L   +L  + +
Sbjct: 184 LVLVAA-IYLALTAILTLLFKQLEKRFS 210



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFVVTLVCSIPLGAIVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGVVFDRMDAVFIAFILNY 95


>gi|254179862|ref|ZP_04886461.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|184210402|gb|EDU07445.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
          Length = 246

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 11/173 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 63  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 116 HAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 175

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L  V   + N+      +I L    IYL L   + +   RL   +A + +
Sbjct: 176 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTALDVAATRL---LAHRRR 225


>gi|119387393|ref|YP_918427.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119377968|gb|ABL72731.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 226

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 18/225 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
           +     F        +    LT+       +  FVLG  +++     +R       K + 
Sbjct: 2   YEFDFSFLNDYMPDLIHGIWLTIGMTVASILPGFVLGTAVAV-----ARLRGRPWVKRIA 56

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +Y+            LI   + L F    L              F +  IAL     A+
Sbjct: 57  TVYVEAIRNTP-----LIIQVFWLFFGLAALQ--------VHIGPFAAAVIALVINVGAY 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI+R+G  ++PRGQ+EAA  L L+  ++   + +PQA+  + P L SQ++ ++  +S+
Sbjct: 104 TAEIMRAGFQSIPRGQLEAADCLALSPFQSLIQIEVPQAVERVYPALVSQFVLMMLATSI 163

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +   +L  V   I + T +  E+ L+    YL L+  +   +
Sbjct: 164 MSQISAEELTGVAYMIQSFTFRGFEVYLVIAVFYLGLASALRFVL 208



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 42/95 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++  + Y   ++ G   T  +  + ++P  ++GT V   RL     V  I  VYVE  R
Sbjct: 5   DFSFLNDYMPDLIHGIWLTIGMTVASILPGFVLGTAVAVARLRGRPWVKRIATVYVEAIR 64

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P ++ +F+L+  + ++             + +N
Sbjct: 65  NTPLIIQVFWLFFGLAALQVHIGPFAAAVIALVIN 99


>gi|218662211|ref|ZP_03518141.1| amino acid ABC transporter permease [Rhizobium etli IE4771]
          Length = 229

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 5/232 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                 +               + V S   G ++++     ++    +  + L   Y + 
Sbjct: 1   MSFTWISSYWPLLLTGAWQTVSLLVISVTFGFIIAIGL-AFAQVSGGRLTRLLARGYCTF 59

Query: 227 FLIFGLPTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F   G P L+ +  L Y +    P++      +    +   F    ++ +   AA+ AE+
Sbjct: 60  F--RGTPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEV 117

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L+AVP+G++EA  A GL+  K TR + LP+A+R  +P +  + +  LK + LA  V
Sbjct: 118 LRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKATPLAFTV 177

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              DL +V   +   T    E +L+    YL+L+ +IA     L A + ++ 
Sbjct: 178 TVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAHVPVRR 229



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 40/110 (36%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  SSY   +L G   T  L    +    II   +   ++S  +L   + R Y   FR 
Sbjct: 3   FTWISSYWPLLLTGAWQTVSLLVISVTFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P L+ ++ LY  V S+LP+        F   L               A 
Sbjct: 63  TPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAA 112


>gi|170735092|ref|YP_001774206.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169821130|gb|ACA95711.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 240

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 1/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + +    +   A   ++    +T + L  LY + F       LV+    +  
Sbjct: 23  LMTVALTLAALAVGAVIGAAIAAAKLSRYRTLRLLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G
Sbjct: 82  STLVTAVGQWFGAEGFIGVPPFVVGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+       N T Q  
Sbjct: 142 MPRSMVLRRILVPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +     NR  A +    ++
Sbjct: 202 VFFVAGGALYLLMTGLSNRVFNRAEAIVGRSFRR 235


>gi|29831771|ref|NP_826405.1| amino acid ABC transporter integral membrane protein [Streptomyces
           avermitilis MA-4680]
 gi|29608888|dbj|BAC72940.1| putative polar amino acid ABC transporter permease protein
           [Streptomyces avermitilis MA-4680]
          Length = 216

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 86/215 (40%), Gaps = 16/215 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
            N   L            + + + VLG +++        L++    K  +   L      
Sbjct: 3   WNWSTLGDFMPRFWDGVLVTLEALVLGSLIAFALGLVWALAQRSSLKAVRWPVLAVTEF- 61

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I   P LV +   + +                       +  I L  + + + AE+ R+
Sbjct: 62  -IRNTPLLVQLFFFFYV-----------LPEWGITLSALATGVIGLGLHYSTYTAEVYRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  VP GQ EAA AL L   +    V+LPQA+R ++P L +  + +LK+S + + +G  
Sbjct: 110 GIDGVPVGQWEAATALSLPRSRTWTAVILPQALRRVVPALGNYVIAMLKDSPMLMTIGVL 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +++       ++T    E I++    ++ ++   +
Sbjct: 170 EMLGEARQFGSRTFHMNEPIVLVGVAFIVIAYPAS 204



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 28/81 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T      G + A  +G +    + S+ K V W      E  RN P LV +FF 
Sbjct: 15  FWDGVLVTLEALVLGSLIAFALGLVWALAQRSSLKAVRWPVLAVTEFIRNTPLLVQLFFF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           +  +               G+
Sbjct: 75  FYVLPEWGITLSALATGVIGL 95


>gi|56697874|ref|YP_168245.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56679611|gb|AAV96277.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 259

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 7/237 (2%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           P  + +  +      R LS   +T+  +    + S V+GI  +            +  +A
Sbjct: 24  PRWNFIWLYDEKQAGRILSGLWMTVKLSIACVLLSLVIGIAGAWLQG-----TRNRALRA 78

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               YI  F     P + L+   + L    PV+   +      V        I+LS +  
Sbjct: 79  SVQGYIQFFR-NTPPLVQLLFFYFALGQFTPVVTGTDGWTEIPVISATGWAIISLSFFAG 137

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF  EI R+G+ AVP    EA  ALG++  +    V+ P A+R  IP L +  +NL+K +
Sbjct: 138 AFNVEIFRAGIEAVPHSTREAEEALGMSRTQTFTNVVFPLALRVSIPALNNNLVNLVKTT 197

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + A A+   +L+    +I N    A    +L+   +YL L  ++   MN    K+ +
Sbjct: 198 TQAFAIAVPELLYESVSIWNDFPSAQNPTMLLLFVVYLGLVGVLVFGMNSWERKMRI 254



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 45/99 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L+ + ++ + +IG      + + N+ +    + Y++ FRN PPLV + F 
Sbjct: 40  ILSGLWMTVKLSIACVLLSLVIGIAGAWLQGTRNRALRASVQGYIQFFRNTPPLVQLLFF 99

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y ++    P+   +        ++  G +  +L+    A
Sbjct: 100 YFALGQFTPVVTGTDGWTEIPVISATGWAIISLSFFAGA 138


>gi|297517480|ref|ZP_06935866.1| glutamine ABC transporter permease protein [Escherichia coli OP50]
          Length = 195

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 12/207 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        +            I V     G+V+ L A   +R F       + L++I
Sbjct: 1   MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAG-FARTFGGWIANHVALVFI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I G P +V +   Y   F  P+               F +  + +   + A+IAEI
Sbjct: 60  E--VIRGTPIVVQVMFIY---FALPMAF------NDLRIDPFTAAVVTIMINSGAYIAEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++++ +G  EA +ALGL+  +  R V+LP A+R ++PPL +Q++  +K++SL + +
Sbjct: 109 TRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIKDTSLFIVI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWM 371
           G A+L   G  II    +A+EI     
Sbjct: 169 GVAELTRQGQEIIAGNFRALEIWSAVA 195



 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++       ++ G   T W++  G+    +IG L G  R     +   +  V++EV R
Sbjct: 4   DWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFARTFGGWIANHVALVFIEVIR 63

Query: 138 NIPPLVVIFFLYKSVLSVL 156
             P +V + F+Y ++    
Sbjct: 64  GTPIVVQVMFIYFALPMAF 82


>gi|284009202|emb|CBA76273.1| amino acid ABC transporter, permease protein [Arsenophonus
           nasoniae]
          Length = 245

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 8/231 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVL------SLFATRLSRHFHEKTGKALPLLYI 224
             +       +T+  +    VFS +LG V+       +   R     +    +  PLL  
Sbjct: 15  YFDWIWQGLLITIGISFCAIVFSSLLGFVVVAARDSHIVFLRWLAISYISLFRNTPLLIQ 74

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F  F +  ++  ++   L  + P       +  +  S EF++  I L  Y+  FIAE 
Sbjct: 75  LFFWYFAVGGILPESVMQWL--NTPHQLTILGLQLAWPSFEFLAGVIGLILYSTPFIAEE 132

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+  V +GQ  AA+ALGL+  +A R V+LPQA++  +PPL  QY+N++KNSSL +A+
Sbjct: 133 LRAGIYGVKQGQNFAALALGLSDWQAMRYVVLPQALKIAMPPLLGQYMNIVKNSSLTMAI 192

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G A+L  V   I +Q+ Q      +   +Y+++  ++  +      ++ +K
Sbjct: 193 GVAELSYVSRQIESQSLQTFTAFGLATILYIAIIAVMEAWGQWRQQRLLIK 243



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 3/153 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  G + T  ++F  ++ ++++G +V A R S    + W+   Y+ +FRN P L+ 
Sbjct: 15  YFDWIWQGLLITIGISFCAIVFSSLLGFVVVAARDSHIVFLRWLAISYISLFRNTPLLIQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +FF Y +V  +LP      +           L              V   +L     +  
Sbjct: 75  LFFWYFAVGGILPESVMQWLNTP---HQLTILGLQLAWPSFEFLAGVIGLILYSTPFIAE 131

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
              +  +  K G+    L +       +  +VL
Sbjct: 132 ELRAGIYGVKQGQNFAALALGLSDWQAMRYVVL 164


>gi|320007606|gb|ADW02456.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 291

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 30/261 (11%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L ++ ++   +                  +    L     T+   A   V S  LG VL
Sbjct: 34  ILGLLAWIIYLLFDTDQFTSAKWTPFTYKGIQELLLRGLGNTLKAFAYAAVLSLALGAVL 93

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           ++      R    K  + +  + +  F                     PVL    FI  +
Sbjct: 94  AV-----GRLSVHKPVRWVSTVLVEFFR------------------AMPVLVMIFFIFVA 130

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +L   L+ Y  + +AE+ R+G+ +V RGQ EAA ALG+   + T  VL PQA+
Sbjct: 131 LKVQPLPALVAGLTLYNGSVLAEVFRTGINSVERGQGEAAYALGMRKTQVTTHVLAPQAV 190

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF---IYLSL 377
           R+++P + SQ +  LK++SL   + + + +  G  I +     +  I + M    IY+ +
Sbjct: 191 RAMLPTIISQLVVALKDTSLGYLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPIYIGM 250

Query: 378 SIMIALFMNRLNAKIALKEKK 398
            ++++ F       +A +E++
Sbjct: 251 CMLLSWFATW----VARRERR 267



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 23/149 (15%)

Query: 9   VTRYFSRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGF 63
           +T   +    LYD      R  +    +I   ++  +  W +                  
Sbjct: 1   MTHATASATALYDIPGPVTRRRHFLYGVISTAVILGLLAWIIY----------------L 44

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L +   F   +   P+T        +L G  NT        + +  +G ++  GRLS +K
Sbjct: 45  LFDTDQFTSAK-WTPFTYKG-IQELLLRGLGNTLKAFAYAAVLSLALGAVLAVGRLSVHK 102

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V W+  V VE FR +P LV+IFF++ ++
Sbjct: 103 PVRWVSTVLVEFFRAMPVLVMIFFIFVAL 131


>gi|50086541|ref|YP_048051.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           ADP1]
 gi|49532515|emb|CAG70229.1| putative amino acid transport protein (ABC superfamily, membrane)
           (gluP) [Acinetobacter sp. ADP1]
          Length = 222

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 14/204 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +   V G+ L +      R +  +    +  +Y+   +I   P LV +   +    
Sbjct: 25  ILLTLIGTVFGLALGIIGGA-CRAWQVQPLSTIFRIYVE--MIRNTPFLVQLFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F           + +  +A+     A+  EIVR+G+ A P+GQ+EAA +L +T
Sbjct: 78  -------FGLPAIGVTMNAWTASILAMIINLGAYSTEIVRAGIQATPKGQIEAAASLAMT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LP ++  I P L SQ + ++  SS+   +   +L  V   I ++  +  EI
Sbjct: 131 RFQILRHVVLPPSLGRIWPALCSQIIIVMLGSSVCSQISMEELTFVANFIQSRNFRGFEI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            ++   +YL L+I+I   + R+  
Sbjct: 191 YIVIAVLYLILAIVIRALLMRIGR 214



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 76/214 (35%), Gaps = 2/214 (0%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S   Y   I  G   T  L   G +    +G + GA R    + ++ I R+YVE+ R
Sbjct: 6   DFSSVLPYTGMIAEGLGRTILLTLIGTVFGLALGIIGGACRAWQVQPLSTIFRIYVEMIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVL 196
           N P LV +FF++  + ++    +        M +N    S   +     A          
Sbjct: 66  NTPFLVQLFFIFFGLPAIGVTMNAWTASILAMIINLGAYSTEIVRAGIQATPKGQIEAAA 125

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            + ++ F            G+  P L     ++    ++       +L F    +   NF
Sbjct: 126 SLAMTRFQILRHVVLPPSLGRIWPALCSQIIIVMLGSSVCSQISMEELTFVANFIQSRNF 185

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             G  +      LY+ L+    A +  I R+   
Sbjct: 186 -RGFEIYIVIAVLYLILAIVIRALLMRIGRACFK 218


>gi|241895708|ref|ZP_04783004.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871075|gb|EER74826.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 214

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 98/228 (42%), Gaps = 14/228 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M    + L      +     +FV + +  + L +    L+        K +   Y+  ++
Sbjct: 1   MDYIIQILPSILSGLKMTIGVFVLTLIGSVPLGILV-SLALRSDIYLLKWVMNAYV--WI 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P L+ I   Y       ++            P F +  +      AA+ AEI R G
Sbjct: 58  MRGTPLLLQIVFVYYGLSLANIMTL----------PRFEAAVVTFILNYAAYFAEIFRGG 107

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P GQ + A  LGL+  +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  D
Sbjct: 108 IQSIPDGQYDGAKVLGLSKFQTMRKIVLPQVFKIVMPSMGNEVVNLVKDSSLVYVIGLGD 167

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+  G    ++    +  +L+ +   + +++   +   R  +K+    
Sbjct: 168 LMRAGNIAASRDVTLVPYLLVGLVYLVLIALA-TIIQRRTESKLNYYR 214



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 33/88 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
               +IL G   T  +    +I +  +G LV     S   L+ W+   YV + R  P L+
Sbjct: 6   QILPSILSGLKMTIGVFVLTLIGSVPLGILVSLALRSDIYLLKWVMNAYVWIMRGTPLLL 65

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            I F+Y  +     +           F+
Sbjct: 66  QIVFVYYGLSLANIMTLPRFEAAVVTFI 93


>gi|254393590|ref|ZP_05008722.1| amino acid ABC transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294812811|ref|ZP_06771454.1| Putative polar amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326441239|ref|ZP_08215973.1| amino acid ABC transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197707209|gb|EDY53021.1| amino acid ABC transporter integral membrane protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294325410|gb|EFG07053.1| Putative polar amino acid ABC transporter permease protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 216

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 13/179 (7%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L++H      + LP+  ++ F +   P LV +   Y +                   
Sbjct: 39  VWALAQHSGPAAVR-LPVTAVTEF-VRNTPLLVQLFFLYYV-----------LPEWGITL 85

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
               +  + L  + + + AE+ R+G+  VP GQ EAA AL L+ R+    V+LPQA+R +
Sbjct: 86  SATATGILGLGLHYSTYTAEVYRAGIDGVPEGQWEAATALNLSRRRTWSGVILPQALRRV 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            P L +  + +LK++ +   +G  +++       ++T   +E   +    +L LS   +
Sbjct: 146 APALGNYVIAMLKDTPMLFVIGVMEMLGAARQFSSETFLTVEAFTVVGVAFLVLSCPAS 204


>gi|170698478|ref|ZP_02889550.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170136649|gb|EDT04905.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 237

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 87/229 (37%), Gaps = 8/229 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
                 ++ +    S   +T+        F F L + L++     +R             
Sbjct: 7   QYWQNYLYTDGYRFSGLAITLWLLVVSIAFGFALAVPLAIARASSNRWISGPV------- 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++ T++  G P  V + + Y   +   V+     +  +          +A      A+  
Sbjct: 60  WLYTYVFRGTPLYVQLLMCYTGIYSLQVVHNHVLLD-TFFRNAMNCTLLAFVLNECAYAT 118

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI    + A   G++EA +A G++  K    ++LP A+R  +P  +++ + +L  ++LA 
Sbjct: 119 EIFAGAIKATSAGEIEAGMAYGMSRFKLYTRIVLPSALRRSLPSYSNEVILMLHATTLAF 178

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                D++ V   + + T  + +   I   +Y  +   +     +L  +
Sbjct: 179 TATVPDILKVTRDVNSATYMSFQAYGIAAVLYAIVVFTLIWAFRKLETR 227



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 64/218 (29%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    +     +   +   R S+N+ ++    +
Sbjct: 5   VSQYWQNYLYTDGYR---FSGLAITLWLLVVSIAFGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + +H ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHNHVLLDTFFRNAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSAGEIEAGMAYGMSRFKLYTRIVLPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y       I 
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAIVVFTLIW 219


>gi|262274234|ref|ZP_06052046.1| ABC polar amino acid transporter inner membrane protein [Grimontia
           hollisae CIP 101886]
 gi|262222044|gb|EEY73357.1| ABC polar amino acid transporter inner membrane protein [Grimontia
           hollisae CIP 101886]
          Length = 201

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 10/182 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           F  K   A+ ++YIS F   G P LV + L   L++  P +              F +  
Sbjct: 24  FKVKGLDAVVIVYISFF--RGTPLLVQLFL---LYYGLPQVFPIF-----VGMDAFTAAV 73

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I LS + +A++AE +R  ++ + + QMEA++++G+T  +A + ++LPQA R   P L + 
Sbjct: 74  IGLSLHFSAYMAESIRGAILGIDKHQMEASLSVGMTEIQAMQRIILPQAARVATPSLMNY 133

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K++SLA  +G A++++      + + +  E  L    IY  + I        +  
Sbjct: 134 FIDMIKSTSLAFTLGVAEIMAKAQMEASSSFKFFESFLAVALIYWLVVIFFTRIQTVMEV 193

Query: 391 KI 392
           ++
Sbjct: 194 RL 195


>gi|167033328|ref|YP_001668559.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166859816|gb|ABY98223.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 239

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 91/227 (40%), Gaps = 2/227 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L    F +                + +    +G+ L L    L+    ++  +A    + 
Sbjct: 5   LSLLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVV-ALAARSRKRLPRAWATTFS 63

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + F       L L+ + Y        +       G  +   F++  IA S   AAF +EI
Sbjct: 64  TVFRGL-PELLTLLIIYYGCQIAAQKILAAMGYEGEFLINTFLAAMIAFSLVFAAFSSEI 122

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
             +    +P+GQ+EA  ALGL+ R     VLLPQ  R  +P L++ +L+LLK++SL   +
Sbjct: 123 WLAAFKTLPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTI 182

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL+      ++ T + +    +    YL  + +       +  +
Sbjct: 183 SLVDLMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERR 229



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L G + T  LA + +     +G +V     S  +L       +  VFR +P L+ 
Sbjct: 15  WGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLPELLT 74

Query: 145 IFFLYKS 151
           +  +Y  
Sbjct: 75  LLIIYYG 81


>gi|271501780|ref|YP_003334806.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345335|gb|ACZ78100.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 221

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 87/220 (39%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + + GI + +    L         +   L  +    I   
Sbjct: 11  WPYWPELLAGLWVTVQLTVMATLGGIAIGICGAALRSGKPTFVSR---LWGLYVEAIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +               F   G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQLFFI-----------VFGLPGLGLKLTAGQAALLAMLVNLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA  LGL+  +    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAARVLGLSRTQTFTRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I ++T  + E+ L+    YL LS+++   +  +  + 
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLCYLVLSMLMRQLLLLVGRRF 216



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G   T  L     +    IG    A R      V+ +  +YVE  
Sbjct: 5   LHFAALWPYWPELLAGLWVTVQLTVMATLGGIAIGICGAALRSGKPTFVSRLWGLYVEAI 64

Query: 137 RNIPPLVVIFFLYKSVL 153
           RN P +V +FF+   + 
Sbjct: 65  RNTPFVVQLFFIVFGLP 81


>gi|238026654|ref|YP_002910885.1| Polar amino acid ABC transporter inner membrane subunit
           [Burkholderia glumae BGR1]
 gi|237875848|gb|ACR28181.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia glumae BGR1]
          Length = 237

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 92/224 (41%), Gaps = 8/224 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            ++ + +  S   +T+   A      FV  + L++   R+SR         L      T+
Sbjct: 12  FLYHDGQRFSGLVVTLWLLAASIGIGFVCAVPLAVA--RVSRRRWLCVPVRL-----YTY 64

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +  G P  V + L Y   +   V+   + +  +     +    +A +  T A+  EI   
Sbjct: 65  VFRGTPLYVQLLLIYTGLYSLEVVRSHSLL-DAFFRSGYHCTVLAFALNTCAYTTEIFAG 123

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + A   G++EAA A G+      R V+LP A+R  +P  +++ + +L  +++A      
Sbjct: 124 AIRATAHGEVEAARAYGMGGWTLYRRVILPSALRRALPLYSNEVILMLHATTVAFTATVP 183

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D++ V     + T  A +   +   +YL++S  +     R    
Sbjct: 184 DILKVARDANSATYLAFQSFGVAALLYLAVSFALVAAFRRAERH 227



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 2/101 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G V T WL  + +    +    +   R+S  + +    R+Y  VFR  P  V +  +Y
Sbjct: 20  FSGLVVTLWLLAASIGIGFVCAVPLAVARVSRRRWLCVPVRLYTYVFRGTPLYVQLLLIY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
             + S+      S  L    F +    +     ++T A   
Sbjct: 80  TGLYSLEV--VRSHSLLDAFFRSGYHCTVLAFALNTCAYTT 118


>gi|154508368|ref|ZP_02044010.1| hypothetical protein ACTODO_00865 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798002|gb|EDN80422.1| hypothetical protein ACTODO_00865 [Actinomyces odontolyticus ATCC
           17982]
          Length = 225

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +    R L      +     I   S VL +VL +F     R       +  PL ++    
Sbjct: 8   VIFEGRNLVRILEGLGVTVGISALSVVLSLVLGVFVGLGMR------SRWRPLRWLMQLY 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +  +  +  + L +  +F    +   N  G         +  +  + +  A + ++VR  
Sbjct: 62  LEFVRIMPQLVLLFVAYFGLTRVAGINLDG-------ITASVLVFTLWGGAEMGDLVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           LIA+PR Q E+A ALGLT R+  R V+LPQ +R + PP  +    ++K +SL V +G  +
Sbjct: 115 LIAIPRHQYESAYALGLTPRQTMRRVILPQTLRRLAPPAVNLITRMVKTTSLVVLIGVVE 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           ++ VG  II+            I  +    Y  +   I+L    +  
Sbjct: 175 VLKVGQQIIDANRFNYPTASLWIYGLIFAAYFLICWPISLLSRHMEK 221



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + ++G  VG G  S  + + W+ ++Y+E  R +P LV++F  
Sbjct: 18  ILEGLGVTVGISALSVVLSLVLGVFVGLGMRSRWRPLRWLMQLYLEFVRIMPQLVLLFVA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  V  I    I     +F   
Sbjct: 78  YFGLTRVAGINLDGITASVLVFTLW 102


>gi|209885183|ref|YP_002289040.1| general L-amino acid transport system permease protein AapM
           [Oligotropha carboxidovorans OM5]
 gi|209873379|gb|ACI93175.1| general L-amino acid transport system permease protein AapM
           [Oligotropha carboxidovorans OM5]
          Length = 454

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/256 (23%), Positives = 108/256 (42%), Gaps = 18/256 (7%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATR 206
           ++ LS         V+   + L+  GL            + +   V GIV S+    A  
Sbjct: 209 RAALSSALTFAGIAVVIVALRLDQGGLPIVDTRQWGGLLVTLVVSVTGIVASMPVGIALA 268

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       +A  +++I  +    L T VL    Y L           F+ G       
Sbjct: 269 LGRTSRIPLLRAFSVMFIEFWRGVPLIT-VLFFATYMLPL---------FLPGDFTIDAL 318

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           + + + ++ +  A+ AE++R GL+A+PRGQ EAA ALGL++ K T L++LPQA+R +IP 
Sbjct: 319 VRVLVGIALFAGAYNAEVIRGGLLAIPRGQREAANALGLSYWKTTGLIVLPQALRHVIPS 378

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSV-----GGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           L + ++ L K+++L + V   DL+          +                IY      +
Sbjct: 379 LVNSFIALFKDTTLVLIVALFDLLGQLRATFADPVWATPTTLFTGFAFTGIIYWIGCFAM 438

Query: 382 ALFMNRLNAKIALKEK 397
           + +   +  ++    +
Sbjct: 439 SRYSLFVERRLDPHRR 454


>gi|148360894|ref|YP_001252101.1| amino acid (glutamine) ABC transporter permease [Legionella
           pneumophila str. Corby]
 gi|148282667|gb|ABQ56755.1| amino acid (glutamine) ABC transporter, permease [Legionella
           pneumophila str. Corby]
          Length = 215

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 19/209 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       +   +LG +LS+   +         G A  ++     ++ G P ++ ++  Y
Sbjct: 19  MQLLTGGMLIGVLLGTLLSICRHQ---------GVACFVINRFISILRGTPLILQLSFIY 69

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  PVL               ++  +A    ++A+ AEI+R+G+ ++P+GQ EAA+ 
Sbjct: 70  ---FAVPVLLGM-------RPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALT 119

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L +      + ++LPQ +++I P + ++ + LLK ++L   +G  DL+    T+  Q   
Sbjct: 120 LQIPTFYLWKDIILPQVIKNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFT 179

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + I  F Y SL +++     ++  +
Sbjct: 180 YFMPLCITGFYYYSLVLLLEALGKKIEKR 208


>gi|229490772|ref|ZP_04384607.1| glutamate transport system permease protein GluC [Rhodococcus
           erythropolis SK121]
 gi|229322162|gb|EEN87948.1| glutamate transport system permease protein GluC [Rhodococcus
           erythropolis SK121]
          Length = 226

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 2/214 (0%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             T  ++  FS +  +++ +    + R       + L   Y++ F    L TL+L+   +
Sbjct: 15  FWTTIQLTFFSAIGAVIIGVLIAAM-RVSPVPVARFLGAAYVTVFRNTPL-TLILLFCLF 72

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L     V    +      V   F    + LS YTAAF+ E +RSG+  VP GQ EA  +
Sbjct: 73  GLSQTLGVNLAKSDSPTFLVDNNFRLAVLGLSVYTAAFVCESLRSGINTVPVGQAEAGRS 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+  +  RL++LPQA R++  PL S  + L KNS++A  +G ++  ++   +I     
Sbjct: 133 LGLSFAQNLRLIVLPQAFRAVTAPLGSVLIALTKNSTIAAVIGVSEASALMKKMIENEAA 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  I+   ++ L++ + L   +L+ +  +  
Sbjct: 193 IFVVGGIFAVGFVILTLPMGLIFGKLSKRFEVSR 226



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 47/105 (44%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y   +L  F  T  L F   I A IIG L+ A R+S   +  ++   YV VFRN P  
Sbjct: 5   SKYGDQLLEAFWTTIQLTFFSAIGAVIIGVLIAAMRVSPVPVARFLGAAYVTVFRNTPLT 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +++ F    +   L +       P  +  NN  L+   L++ T A
Sbjct: 65  LILLFCLFGLSQTLGVNLAKSDSPTFLVDNNFRLAVLGLSVYTAA 109


>gi|116334030|ref|YP_795557.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
 gi|116099377|gb|ABJ64526.1| ABC-type amino acid transport system, permease component
           [Lactobacillus brevis ATCC 367]
          Length = 229

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 19/226 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              +      +     + V +F L  +  +  T L++  H +    L   YIS   + G+
Sbjct: 17  WSSIPQILSGLPMTIFLTVMAFGLATIWGMLLT-LAQLSHVRVLHGLARAYISF--MRGV 73

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV++ + Y             F  G T  P   +  I+ +   AAF++E+ RS  + +
Sbjct: 74  PMLVVLFIVY-------------FGFGLTAVP---AAIISFTLGAAAFVSEVFRSAFLGI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA ++GL +RK  R +++PQA R  IP L +  L++ K +SLA  +   D+   
Sbjct: 118 DHGQYEAAYSIGLPYRKVMRFIIIPQAFRISIPALGNILLDMFKGTSLAAMITVTDMFMQ 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +       + I +    +Y    ++I    N+L   +     K
Sbjct: 178 AKIVAGANQDYMTIYITIAILYWLCCVVITTGQNQLERWLDFDRPK 223



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T +L       ATI G L+   +LS  +++  + R Y+   R +P LVV+F +
Sbjct: 23  ILSGLPMTIFLTVMAFGLATIWGMLLTLAQLSHVRVLHGLARAYISFMRGVPMLVVLFIV 82

Query: 149 YKSVLSVLPIP 159
           Y          
Sbjct: 83  YFGFGLTAVPA 93


>gi|169830102|ref|YP_001700260.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168994590|gb|ACA42130.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 253

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 9/250 (3%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
            +V          +   F        +      +     +   S VLG +  L     ++
Sbjct: 6   SAVFIHKKKVGEEMDKYFDATYIWSAIPVLLPFLKITFLVAGSSIVLGTIFGLLLAA-AK 64

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               K  + L  LY  T ++   P++VL+ L Y   +  P L +   +   ++    + +
Sbjct: 65  LSSVKLLRKLANLY--TTIMRCTPSIVLLFLVY---YGVPALAENFGLNLHSIETA-IFV 118

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +  +   AA ++E++RS  +A+P+GQ EAA+++GLT  +A R ++ PQA+   +P   +
Sbjct: 119 VVTFTLQFAAIMSEVMRSAYLAIPKGQFEAAVSVGLTPIQAYRRIIFPQALVVALPNFGN 178

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNR 387
             + LL+  +LA  +G  D+V     II       A+EI +    IY  LSI+I    + 
Sbjct: 179 GMIALLQEGALAYTIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIIIEKIFSI 238

Query: 388 LNAKIALKEK 397
           L       +K
Sbjct: 239 LEKVFGRGKK 248



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +L     TF +A S ++  TI G L+ A +LS+ KL+  +  +Y  + R  P +
Sbjct: 29  WSAIPVLLPFLKITFLVAGSSIVLGTIFGLLLAAAKLSSVKLLRKLANLYTTIMRCTPSI 88

Query: 143 VVIFFLYKSVL 153
           V++F +Y  V 
Sbjct: 89  VLLFLVYYGVP 99


>gi|328957173|ref|YP_004374559.1| putative amino acid ABC transporter, membrane-spanning subunit
           [Carnobacterium sp. 17-4]
 gi|328673497|gb|AEB29543.1| putative amino acid ABC transporter, membrane-spanning subunit
           [Carnobacterium sp. 17-4]
          Length = 211

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 19/221 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L     T+     I + +  LG +++       R +  K    +  +YI  +++ 
Sbjct: 7   ITPNLLDGLKTTLLLFLIIVIATIPLGFLIACI-----RVYAPKWISWIIQVYI--YIMR 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ + + +   F  P++              F +         AA+ AEI R G++
Sbjct: 60  GTPLLLQLMVVF---FGLPLV--------GITFDRFSAAVFTFIINYAAYYAEIFRGGIL 108

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EA   LG+      R +++PQ MR ++P + ++ + L+K++SL   +G  +L+
Sbjct: 109 SIPKGQFEAIRVLGIGKINGFRKIIIPQVMRVVLPSVGNEVIALVKDTSLIYILGIGELL 168

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G  I   T  ++        IYL ++ ++ L +N +  K
Sbjct: 169 RAGQ-IAANTYASLIPYAAVGAIYLVVTGLVTLLLNAIEKK 208



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 37/94 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L    +I    +G L+   R+ A K ++WI +VY+ + R  P L+ +  +
Sbjct: 11  LLDGLKTTLLLFLIIVIATIPLGFLIACIRVYAPKWISWIIQVYIYIMRGTPLLLQLMVV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +  +  V    D      F   +N          
Sbjct: 71  FFGLPLVGITFDRFSAAVFTFIINYAAYYAEIFR 104


>gi|296102999|ref|YP_003613145.1| allantoate transport membrane protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057458|gb|ADF62196.1| allantoate transport membrane protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 221

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + + G+ + +F   +      ++G+A     I    +  +
Sbjct: 11  WPHWPALLAGLWVTIQLTVMATLGGLAIGIFGAVI------RSGRATWFSRIWGGYVEII 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                +   + + F  P +G     G         +  +A+     A+  EIVR+G+   
Sbjct: 65  RNTPFVVQLFFIVFGLPNMGLKMTAGE--------AALLAMVINLGAYSTEIVRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT  +    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLTRTQTFIRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I ++T  + E+ L+   IYL+LSI +   M     K
Sbjct: 177 ANLIQSRTFLSFEVYLVTTGIYLALSITLRQLMMAAGRK 215



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 35/96 (36%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    +  A+L G   T  L     +    IG      R       + I   YVE+ 
Sbjct: 5   LHFSELWPHWPALLAGLWVTIQLTVMATLGGLAIGIFGAVIRSGRATWFSRIWGGYVEII 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNMGLKMTAGEAALLAMVIN 100


>gi|257056920|ref|YP_003134752.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586792|gb|ACU97925.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 223

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 18/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            +      F   +    L    +T+         ++VLG+V +L      R         
Sbjct: 1   MNSVWDWQFAFEVLPAILHGLLVTIQATVLGSALAYVLGLVFALLRRSPIRLVSGGV--- 57

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               ++    +   P LV +   + +            + G T+SP  ++  I L  + A
Sbjct: 58  ----WLFMEFVRSTPLLVQLFFLFYV----------LPLVGITLSP-MVTGVIGLGLHYA 102

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            + AE+ R+G+ AVP+GQ EAA AL L   +    V+LPQA+  ++P L +  +++ K +
Sbjct: 103 TYTAEVYRAGIEAVPKGQWEAATALSLPRTRTWTAVILPQAITRVLPALGNYTISMFKET 162

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L +A+G  D+V       +   + +E I I   ++L LS   +L +  L  +  L ++
Sbjct: 163 PLLLAIGVLDIVGAAQEEASLAFRYVEPITIAGILFLLLSYPSSLLVRYLERRFGLAKQ 221



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 42/110 (38%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +        AIL G + T      G   A ++G +    R S  +LV+    +++E  R
Sbjct: 6   DWQFAFEVLPAILHGLLVTIQATVLGSALAYVLGLVFALLRRSPIRLVSGGVWLFMEFVR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + P LV +FFL+  +  V       +    G+ L+    +         A
Sbjct: 66  STPLLVQLFFLFYVLPLVGITLSPMVTGVIGLGLHYATYTAEVYRAGIEA 115


>gi|123966463|ref|YP_001011544.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9515]
 gi|123200829|gb|ABM72437.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9515]
          Length = 339

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 18/275 (6%)

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
             ++ +   ++ V+      +    ++  + +V             + +  R     TLT
Sbjct: 76  WFLSLLSITFITVYGPKWNWLRKNLIFGWMGTVPLGIYLLNGGLGLVPVMTRHWGGLTLT 135

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +   +   +FS  +GIVL+L   R S  F  +   +        F I  +  + LIA+ +
Sbjct: 136 ILITSCSILFSLPIGIVLAL--CRRSSMFLIQKLSS--------FYIDVMRAVPLIAVLF 185

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P+     F+             IA + + +A+IAE +R GL ++P  Q+EAA +
Sbjct: 186 FGQLLIPL-----FLPVGLEIERVWRAIIAFTLFVSAYIAEDIRGGLQSIPNNQIEAAKS 240

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--- 359
           LGL   +    +L+PQA+R  +P +T+Q + L +N+SL   +G  +L+ V  +I+     
Sbjct: 241 LGLNKYQVNIFILIPQALRVALPAITNQLIGLFQNTSLMSILGLMELLGVSRSILANPEF 300

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            GQ IE+ +    +Y     ++A    +L  ++ +
Sbjct: 301 IGQYIEVYIWLASVYWLFCTVMAFVSKKLEQRMTI 335


>gi|187919666|ref|YP_001888697.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia phytofirmans PsJN]
 gi|187718104|gb|ACD19327.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phytofirmans PsJN]
          Length = 248

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 14/206 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S VLG ++ +    ++     K  + +   Y+   LI   P +V +   +  
Sbjct: 23  VTLGLTAVSTVLGGIVGIAGASVA-VAGPKWARWVVASYVE--LIRNTPFIVQLFFVF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F          E  +  +A++    A+  EIVR+G+ ++ RGQ++AA ALG
Sbjct: 78  ---------FGLPSLGIHIDEVQAAILAMTVNLGAYAIEIVRAGIDSISRGQIQAAQALG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+  R ++LPQA+ ++ P L SQ L ++  S++   +   DL      I ++  ++ 
Sbjct: 129 LHGRQVFRFIVLPQAIANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
           E  LI    YL LSI +   +NRL  
Sbjct: 189 ESYLIITATYLVLSIALRQILNRLGR 214



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 38/95 (40%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    Y   +  G   T  L     +   I+G    +  ++  K   W+   YVE+ R
Sbjct: 6   DFSGFGLYGGMLARGVAVTLGLTAVSTVLGGIVGIAGASVAVAGPKWARWVVASYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P +V +FF++  + S+    D        M +N
Sbjct: 66  NTPFIVQLFFVFFGLPSLGIHIDEVQAAILAMTVN 100


>gi|260904764|ref|ZP_05913086.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Brevibacterium linens BL2]
          Length = 263

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 13/185 (7%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L+        +    + +  F   G   LV +   + L +  P+L               
Sbjct: 42  LAMTSLHAWMRIPARIIVEFF--RGTSLLVQL---FWLFYVFPLL--------GVDLDPI 88

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +    AL+    A+ AE+VRS +  V +GQ E AIAL L+  +    V+ PQA   +IP 
Sbjct: 89  LCGIGALALNYGAYSAEVVRSSIKTVDKGQWEGAIALSLSPTRRMVRVIFPQAWALMIPS 148

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  + LLK +++   +   DL      +   T        I + IY  ++ +I   MN
Sbjct: 149 LATLLIQLLKGTAVVSFITLQDLTEKIDQLRQSTNDTYFAFTIGLIIYFVIAWLIQEGMN 208

Query: 387 RLNAK 391
            L  +
Sbjct: 209 FLERR 213


>gi|239833586|ref|ZP_04681914.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821649|gb|EEQ93218.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 240

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 3/216 (1%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                +I V  + LG+++ +F   L + +     +   LL + T ++  +P LVLI + Y
Sbjct: 26  FWHTLQIAVGGYSLGLLIGMFG-ALGKLYGGPIIRD--LLEVYTTVVRAVPELVLILILY 82

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
               D        F  G        +    +     A+  E++R  + A+  GQ+EAA A
Sbjct: 83  YAGTDLLNQLLALFGHGKVDISGLAAGIFVIGVVQGAYSTEVLRGAIKAIAPGQIEAARA 142

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
            G+   K  R + +P  +   IP + + +L   K+++L   VGF++L  V       T  
Sbjct: 143 FGMPPSKMLRRITIPAMLPFAIPGIANLWLISTKDTALLAVVGFSELTLVTRQAAGTTKH 202

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +    +YL L+++  +F+  +  +      +
Sbjct: 203 YLLFFMAAGVLYLGLTLISNVFIGIVERRARRGFAR 238



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 1/82 (1%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I+  ++       +   +L GF +T  +A  G     +IG     G+L    ++  +  V
Sbjct: 6   INWSLLALNPPG-WGGVLLQGFWHTLQIAVGGYSLGLLIGMFGALGKLYGGPIIRDLLEV 64

Query: 132 YVEVFRNIPPLVVIFFLYKSVL 153
           Y  V R +P LV+I  LY +  
Sbjct: 65  YTTVVRAVPELVLILILYYAGT 86


>gi|168180075|ref|ZP_02614739.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226948680|ref|YP_002803771.1| amino acid ABC transporter permease [Clostridium botulinum A2 str.
           Kyoto]
 gi|182668898|gb|EDT80874.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum NCTC 2916]
 gi|226841764|gb|ACO84430.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A2 str. Kyoto]
          Length = 221

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 85/182 (46%), Gaps = 10/182 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K   ++  +++S F   G P +  +   Y              +          +  
Sbjct: 46  LKIKVLYSISKIWVSFF--RGTPLIAQLFFLYFGIVQL--------VPSLKNMDAMTAAI 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTSIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K S+LA  +G  ++++V  +    + + +E     + IY  +        N L  
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQSEGASSYRFLESFTAVIIIYWIIISAFGYLQNILER 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|113460400|ref|YP_718462.1| arginine transporter permease subunit ArtM [Haemophilus somnus
           129PT]
 gi|170717498|ref|YP_001783480.1| arginine ABC transporter permease [Haemophilus somnus 2336]
 gi|112822443|gb|ABI24532.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Haemophilus somnus 129PT]
 gi|168825627|gb|ACA30998.1| binding-protein-dependent transport systems inner membrane
           component [Haemophilus somnus 2336]
          Length = 227

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLS-----RHFHEKTGKALPLLYISTFLIFGL 232
                  T A+    S +L IV  L A  L+         EK   +LP + +   +  G 
Sbjct: 1   MIKDYFLTIAQGIPTSLILTIVALLVAFFLALTLTFALSMEKKWLSLP-INLFLTIFTGT 59

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSG 288
           P LV   L Y         GQF++I  S + P     +    + L+  + A+  ++    
Sbjct: 60  PLLVQFFLIYAGP------GQFSWIVNSFLWPLLSSAWFCAILTLALNSTAYSTQLFYGA 113

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+ +GQ E+ +ALGL+  +    +L+P A++  +P  +++ + + K +SLA  +   D
Sbjct: 114 VKAISKGQWESCVALGLSRWQTL-KILVPYALKRALPSYSNEIILVFKGTSLASIITILD 172

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++     +      A+ I  I   IYL ++ +  L + RL  K+ + E+
Sbjct: 173 IMGYARQLYGTEYDALTIYGIAGVIYLIITGIATLLLRRLERKVLVFER 221


>gi|330821199|ref|YP_004350061.1| cystine ABC transporter permease [Burkholderia gladioli BSR3]
 gi|327373194|gb|AEA64549.1| cystine ABC transporter permease [Burkholderia gladioli BSR3]
          Length = 217

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 81/211 (38%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  + + +  +GI L L    L+R             Y+S      + TL L+      
Sbjct: 15  VSLLLALCAVAVGIPLGLLL-ALARWRRVPVLDRAIAAYVSVMRPTPVVTLCLLVF---- 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P   +  +ALS  T AF  EI R+ L+A+P  Q+EA  A G
Sbjct: 70  ---------FVMPAAGLDLPPMAAATLALSLNTTAFNCEIWRAALLALPADQLEAGAAFG 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +    ++LPQ  R+ + PL S+   LLK +  A  +G  D+    G I   T   +
Sbjct: 121 FSGWQTLVRIVLPQLWRASLGPLVSEITLLLKITPAASVIGIVDITRAAGRIGADTYDPL 180

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              L    +Y  +  +       L  + A +
Sbjct: 181 PPFLAATVLYTLIIALGVQGQRLLERRAAQR 211



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 1/107 (0%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            SSY  A+L G   +  LA   +     +G L+   R     ++      YV V R  P 
Sbjct: 3   TSSYL-ALLQGAGVSLLLALCAVAVGIPLGLLLALARWRRVPVLDRAIAAYVSVMRPTPV 61

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + +   ++  + +              + LN    +         A 
Sbjct: 62  VTLCLLVFFVMPAAGLDLPPMAAATLALSLNTTAFNCEIWRAALLAL 108


>gi|313623357|gb|EFR93582.1| probable amino-acid ABC transporter permease protein YckA [Listeria
           innocua FSL J1-023]
          Length = 213

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 107/208 (51%), Gaps = 13/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           AK  +  FV+ +V S+    +    +  K      +L I  +++ G P L+ +   Y   
Sbjct: 15  AKTTLLVFVVTLVCSIPLGAIVAVGNISKIAPLKFILNIYIWIMRGTPLLLQLIFIY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P++          V     +++IA     AA+ AEI R G +++  GQ E+A  LGL
Sbjct: 72  YGLPII--------GIVFDRMDAVFIAFILNYAAYFAEIFRGGFLSIENGQYESAKVLGL 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           T+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G   +++    I 
Sbjct: 124 TYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIP 183

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++L+   IYL+L+ ++ L   +L  + +
Sbjct: 184 LVLVAA-IYLALTAILTLLFKQLEKRFS 210



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A+L G   T  +    ++ +  +G +V  G +S    + +I  +Y+ + R  P L+ 
Sbjct: 7   ILPALLDGAKTTLLVFVVTLVCSIPLGAIVAVGNISKIAPLKFILNIYIWIMRGTPLLLQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + F+Y  +  +  + D    +     LN 
Sbjct: 67  LIFIYYGLPIIGIVFDRMDAVFIAFILNY 95


>gi|312142892|ref|YP_003994338.1| polar amino acid ABC transporter, inner membrane subunit
           [Halanaerobium sp. 'sapolanicus']
 gi|311903543|gb|ADQ13984.1| polar amino acid ABC transporter, inner membrane subunit
           [Halanaerobium sp. 'sapolanicus']
          Length = 229

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 102/219 (46%), Gaps = 14/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F         ++  +S +LG+V+ L     ++ +  K      + + +        ++
Sbjct: 12  LPFLLRGTVVTIQLTFWSLLLGVVIGLPL-AFAQVYGNKI-----VTFFTAIYERIARSI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +   +++  P+L            P F +  + +   ++A+ ++I R  + +V   
Sbjct: 66  PLLVILLLINYALPML--------GFRIPVFRAAVLGIGLRSSAYQSQIYRGAIQSVSGS 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q++AA++LG+    A   ++ PQA+R  IPP+T++   +LK++SLA  +G  +LV  G  
Sbjct: 118 QLKAAMSLGMNKLTAFSHIIAPQAIRIAIPPVTNESAIVLKDTSLAFTIGVVELVRQGDY 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I  + + + I L    IY  L+  I L ++    K  +
Sbjct: 178 FIATSNEPMVIYLTVAAIYFILTTTINLALSLFEKKYKI 216


>gi|66046195|ref|YP_236036.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256902|gb|AAY37998.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 216

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 14/227 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +      L      +    ++ V  F+L ++L LF     R         L   Y+
Sbjct: 1   MEFDIAFAWSILPELFQGLLVTVQVVVLGFMLAVLLGLFLALTLR-SQITIVHRLSKGYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S F     P +V +   Y L F  P+             P   +  I L CY AA+IAE 
Sbjct: 60  SFF--RNTPLMVQL---YVLFFALPL--------AGITFPAVTTGVIGLGCYYAAYIAEA 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  +  +P GQ EAA AL        R ++LPQA++ ++P L +  + + K + L   +
Sbjct: 107 YRGAIDDIPAGQWEAARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +L      I   T +  E   +   ++L++S+  +L    L  +
Sbjct: 167 TIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 213


>gi|296110979|ref|YP_003621360.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832510|gb|ADG40391.1| glutamine ABC transporter, permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 219

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 19/210 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +    + S + G V+ +        F +  G           +   +  L L+ + + +
Sbjct: 28  VSVISVILSLIFGSVVGIIQFERLPFFSKFVG----------TINNVIRNLPLLLIIFFV 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P +            P F +  IA+S + +A +AEIVR GL +V  GQ E A A G
Sbjct: 78  YFALPKI--------GIHLPIFWATVIAMSTFESAMLAEIVRGGLESVDIGQFEGARANG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA- 363
           L++ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  +++   G  +  Q     
Sbjct: 130 LSNMQTMIYIILPQAYKRMIPPIISQLISLVKDTSLAMGIVLSEMTYRGQIVYAQNSTYI 189

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I +++    +Y  L+  ++L     + K+A
Sbjct: 190 IPVLIAITLVYFLLNYGLSLIARWADHKLA 219



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++   +I + I G++VG  +       +        V RN+P L++IFF
Sbjct: 17  YLLGGLGITVGVSVISVILSLIFGSVVGIIQFERLPFFSKFVGTINNVIRNLPLLLIIFF 76

Query: 148 LYKSVLSVLPIPDHSI 163
           +Y ++  +        
Sbjct: 77  VYFALPKIGIHLPIFW 92


>gi|239834533|ref|ZP_04682861.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822596|gb|EEQ94165.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 216

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 13/186 (6%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +        +    L++S   + G+P LV   L          L  +         P  +
Sbjct: 42  AALSRRVWLRRFAALWVSF--LRGVPLLVQ-LL----------LCYYLLPVIGINVPALV 88

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  + +   ++A+++EI R  +IA+P GQ EAA A+G+  R     ++LPQA R  +P L
Sbjct: 89  AAVVTVGICSSAYVSEIWRGAIIALPPGQAEAATAIGMGPRDIWTRIILPQAARLSLPAL 148

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            ++ + L+K SSL   VG  ++          T + +E+ +    IYL +++ +A     
Sbjct: 149 VNEMILLVKASSLVSVVGILEVTRASQAQAATTFRPLEVYVAAACIYLLINLCLAAVGRY 208

Query: 388 LNAKIA 393
           L  +++
Sbjct: 209 LEHRMS 214


>gi|158426029|ref|YP_001527321.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332918|dbj|BAF90403.1| amino acid ABC transporter, permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 224

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 14/228 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             +      ++   +  +G+V+++    L +    +  + L   
Sbjct: 1   MNYVFQFGDVFNAWPELLMGALLTIRLSAMAMAIGLVVAVV-CALGKTGGPRPVRWLVDT 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   +I   P LV I L +           F             +  +A+     A+  
Sbjct: 60  YVE--VIRNTPFLVQIFLIF-----------FGLPRMGIRLDANEAALLAMVVNIGAYAT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+  + +GQ+EA +ALGL   +    +++  A+++I P LTSQ++ L+  SS+  
Sbjct: 107 EIVRAGIETIHKGQIEAGLALGLKPVQVFTYIVIFPALKAIYPALTSQFILLMLTSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           A+   +L ++   +  QT ++ EI ++   +YL++S+M A     +  
Sbjct: 167 AISAEELTAIANNLQAQTFRSFEIYIVVTAMYLAMSLMFAAVFELIYR 214



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/203 (20%), Positives = 76/203 (37%), Gaps = 2/203 (0%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L+G + T  L+   M    ++  +   G+    + V W+   YVEV RN P LV I
Sbjct: 14  WPELLMGALLTIRLSAMAMAIGLVVAVVCALGKTGGPRPVRWLVDTYVEVIRNTPFLVQI 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           F ++  +  +    D +      M +N    +   +       I       G+ L L   
Sbjct: 74  FLIFFGLPRMGIRLDANEAALLAMVVNIGAYATEIVRAGIE-TIHKGQIEAGLALGLKPV 132

Query: 206 RLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           ++  +       KA+     S F++  L + V+ A+  +         Q        +  
Sbjct: 133 QVFTYIVIFPALKAIYPALTSQFILLMLTSSVVSAISAEELTAIANNLQAQTFRSFEIYI 192

Query: 265 EFMSLYIALSCYTAAFIAEIVRS 287
              ++Y+A+S   AA    I R+
Sbjct: 193 VVTAMYLAMSLMFAAVFELIYRA 215


>gi|158425755|ref|YP_001527047.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332644|dbj|BAF90129.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 224

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V   VLG++  +     +R    K  +   +LY+                      
Sbjct: 25  VELTVVGGVLGVLFGIV-CAWARSLGPKWLRPPVVLYVELIRNTPFLI------------ 71

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            +     F          E  +   A+     A+  EI+R+G+ A PRGQ EA  +L +T
Sbjct: 72  -QLFFIFFGLPSLGVSLTEMQAAIFAMVINLGAYGCEIIRAGIEATPRGQFEAGASLAMT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+L  A++ I P L+SQ + ++  S++   +   D+      I ++T +A E+
Sbjct: 131 RIQTFRHVVLVPALQRIWPALSSQIVIVMFGSAVCSQIAVEDITFAAQFIQSRTFRAFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++   +YL L++++   M  L   +  + +
Sbjct: 191 YILATILYLVLALVLRQVMRALGTLLFPRRR 221



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 37/95 (38%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y +   Y   I  G   T  L   G +   + G +    R    K +     +YVE+ R
Sbjct: 6   DYGAIVPYTPLIAKGVGITVELTVVGGVLGVLFGIVCAWARSLGPKWLRPPVVLYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P L+ +FF++  + S+           F M +N
Sbjct: 66  NTPFLIQLFFIFFGLPSLGVSLTEMQAAIFAMVIN 100


>gi|317047472|ref|YP_004115120.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316949089|gb|ADU68564.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 239

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 1/187 (0%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++   ++  + L   Y + F       LV+    +       ++GQ     G   +P F+
Sbjct: 44  AKLSTQRWLRWLGEAYSTVFRGI-PELLVIYLFYFGGSGLITLIGQMFGADGFIEAPPFL 102

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              +A+   + ++  E+ R+  +A+ +G++EAA+A+G+   +  + +LLPQ +R  +P +
Sbjct: 103 IGALAIGLISGSYQGEVYRAARLALAKGEIEAAVAIGMPRWRIAQRILLPQVVRYALPGM 162

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +   LK+S+L    G  +L+         T       L+    YL L+++      R
Sbjct: 163 SNVWQMSLKDSALVSVTGIVELMRASQIAAGSTRDYFTFYLVGGACYLVLTLLSNHAFRR 222

Query: 388 LNAKIAL 394
             +++  
Sbjct: 223 AESRLGR 229


>gi|222082286|ref|YP_002541651.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726965|gb|ACM30054.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 221

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 13/223 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L            +   + ++G +       L+R       + L LL++  F      +
Sbjct: 4   YLPLFLKAAVLTIWLSWLALMIGAIAG-GLVALARTSRWLPLRVLALLFVEFFR-----S 57

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           + ++ + +  +F  PV+   +    +  +        A        ++E++R+G+ +V R
Sbjct: 58  IPILIVMFFAYFGLPVMFGIDISTFTAATLALALHATAT-------MSEVMRAGIESVGR 110

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA + G+T  +  R V+ PQA+R ++PP    Y+  LK SSLA  +G+ +L   G 
Sbjct: 111 GQWEAAQSSGMTFGQTMRHVVGPQALRVVLPPSVGVYVTTLKESSLASIIGYVELTKTGL 170

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +   TG     +L+   +Y  ++  I+L    L  +  +  K
Sbjct: 171 LVRESTGGGFAPLLMLGVLYFLINYGISLAGGVLERRYNVGTK 213



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 36/70 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY    L   V T WL++  ++   I G LV   R S    +  +  ++VE FR+IP L+
Sbjct: 3   SYLPLFLKAAVLTIWLSWLALMIGAIAGGLVALARTSRWLPLRVLALLFVEFFRSIPILI 62

Query: 144 VIFFLYKSVL 153
           V+FF Y  + 
Sbjct: 63  VMFFAYFGLP 72


>gi|190895142|ref|YP_001985435.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700803|gb|ACE94885.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 222

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 14/226 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F   +                     S +L +VL +    L R  +    +    ++I
Sbjct: 3   YDFDFSVVWDAWPILLDGTLKALYYTAVSSILALVLGVLVM-LMRRSNVSPVRITARVFI 61

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +I   P LV +   +   F  P +G    +          +   AL+  TAA+IAE+
Sbjct: 62  E--VIRNTPFLVQLFFIF---FGLPSIGLKFSVS--------FAAIAALTVNTAAYIAEV 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R G+  +P GQ+EA  ALGL  R+    ++L  ++R++ P L++Q++ L+  SS+  ++
Sbjct: 109 LRGGVDGLPYGQIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLTSSVVASI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              +L      I +Q+ ++ E+  +   IYL+LSI I+ F+     
Sbjct: 169 SAPELTYSAQIIESQSFRSFEVYFVVTGIYLALSICISSFLRLFGR 214



 Score = 43.0 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 36/78 (46%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++        +L G +   +      I A ++G LV   R S    V    RV++EV R
Sbjct: 6   DFSVVWDAWPILLDGTLKALYYTAVSSILALVLGVLVMLMRRSNVSPVRITARVFIEVIR 65

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV +FF++  + S+
Sbjct: 66  NTPFLVQLFFIFFGLPSI 83


>gi|300858067|ref|YP_003783050.1| glutamate ABC transporter permease [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685521|gb|ADK28443.1| glutamate ABC transport system permease protein [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205789|gb|ADL10131.1| glutamate ABC-type transporter, permease component [Corynebacterium
           pseudotuberculosis C231]
 gi|302330348|gb|ADL20542.1| glutamate ABC-type transporter, permease component [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276024|gb|ADO25923.1| glutamate ABC-type transporter, permease component [Corynebacterium
           pseudotuberculosis I19]
          Length = 228

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 7/231 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
               L    L     T+   A   + +   G +L+       R    +  + L  LY++T
Sbjct: 4   MWSQLGPAILPAFWATIKLTALAAMGAMACGTLLTAM-----RVSPVRILRTLAALYVNT 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                L TLV++   + L+    +               F    +    YT+AF++E +R
Sbjct: 59  VRNIPL-TLVVLFYSFGLYQTLGLSLASRESATFLADNNFRLATLGFILYTSAFVSECLR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+  V  GQ EAA +LGL+  +    ++ PQA+R+ I PL +  + L KN+++A  +G 
Sbjct: 118 SGINTVDFGQAEAARSLGLSFSQTFNKIIFPQAIRAAIVPLGNTLIALTKNTTIASVIGV 177

Query: 347 ADLVSVGGTII-NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +   +I N   Q   I   +   +++L++ +  F+  L+ ++A+K+
Sbjct: 178 GEASLLMKEVIENHASQLFVIFGCFALGFMALTLPMRYFLGALSTRMAVKK 228



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 45/105 (42%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S    AIL  F  T  L     + A   GTL+ A R+S  +++  +  +YV   RNIP  
Sbjct: 6   SQLGPAILPAFWATIKLTALAAMGAMACGTLLTAMRVSPVRILRTLAALYVNTVRNIPLT 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +V+ F    +   L +   S      +  NN  L+     + T+A
Sbjct: 66  LVVLFYSFGLYQTLGLSLASRESATFLADNNFRLATLGFILYTSA 110


>gi|239907739|ref|YP_002954480.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
 gi|239797605|dbj|BAH76594.1| amino acid ABC transporter permease protein [Desulfovibrio
           magneticus RS-1]
          Length = 237

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/223 (26%), Positives = 113/223 (50%), Gaps = 5/223 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   + +    +   A + + + ++G VL +    L  + H  T KA+       +L  G
Sbjct: 11  SWEAMPYILGGLWWTAGLILGAMLVGFVLGVPLAVLHVYGHPLTRKAVA---GYVWLFRG 67

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P LV + L Y        L +   +    +S  F+S  I L   +AA+ ++I R  + +
Sbjct: 68  VPILVQLYLFYFGIMAY--LSEIPALSFLPLSSGFLSAVIVLGLTSAAYQSQIFRGAMAS 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ++AA ALG++   A R ++LPQA+R  IP  +++Y  LLK+S+LA  +G  ++++
Sbjct: 126 LPAGQLKAARALGMSDAVAIRSIILPQALRLAIPAWSNEYSILLKDSALAFTIGVLEVMA 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              ++   T Q + + ++   ++  L+      + RL AK+ +
Sbjct: 186 RTRSVAATTHQPLPLSILAGALFFFLTWAGIKTLKRLEAKVRI 228



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 41/116 (35%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            +       IL G   T  L    M+   ++G  +    +  + L       YV +FR +
Sbjct: 9   QASWEAMPYILGGLWWTAGLILGAMLVGFVLGVPLAVLHVYGHPLTRKAVAGYVWLFRGV 68

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           P LV ++  Y  +++ L        LP      +  +     +    ++IF  +  
Sbjct: 69  PILVQLYLFYFGIMAYLSEIPALSFLPLSSGFLSAVIVLGLTSAAYQSQIFRGAMA 124


>gi|254503514|ref|ZP_05115665.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222439585|gb|EEE46264.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 242

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 3/209 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V  F LG+++ + A    + +     +   LL + T +I  +P LVLI L Y    
Sbjct: 32  LQLAVGGFSLGLMIGI-AGAFGKLYGGPILRD--LLEVYTTVIRAVPELVLILLLYYAGT 88

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D                    +    +     A+  E++R  + AVP GQ+EAA A G++
Sbjct: 89  DTVNALLGLVGLPRVDISGLAAGIFVIGVVQGAYQTEVLRGAIKAVPPGQIEAARAYGMS 148

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  R + LP  +   IP L++ +L   K+++L   VGF++L  V       T   +  
Sbjct: 149 PLKTLRRITLPAMLPYAIPGLSNLWLIATKDTALLAVVGFSELTLVTRQAAGSTKAYMLF 208

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 +YL+L+++    +  +  +    
Sbjct: 209 FCAAGLMYLTLTLVSNRVIAIIEKRARRG 237



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 31/71 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L GF  +  LA  G     +IG     G+L    ++  +  VY  V R +P LV+
Sbjct: 20  WGGVLLEGFAASLQLAVGGFSLGLMIGIAGAFGKLYGGPILRDLLEVYTTVIRAVPELVL 79

Query: 145 IFFLYKSVLSV 155
           I  LY +    
Sbjct: 80  ILLLYYAGTDT 90


>gi|160899041|ref|YP_001564623.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160364625|gb|ABX36238.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 360

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 111/261 (42%), Gaps = 14/261 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            +  L   F      + +  +    +++  G+       S     +     + V + + G
Sbjct: 111 GVAALPRFFGRAGMAMLLAGLTGFGVLMAGGVAGLAPVPSDLWGGLPLTLFLAVIACLAG 170

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           + L +    L R       + L   +I            LI L +   F  P+L     +
Sbjct: 171 VPLGILL-ALGRRSSLPLIRILCTGFIEAVRGVP-----LITLLFFGAFVLPML-----V 219

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                    + + + L+ ++AA++AE+ R GL AVP+GQ+ AA A+G T  +  R V+LP
Sbjct: 220 PAQWRVDPMVRIAVCLAAFSAAYLAEVFRGGLQAVPQGQVMAAQAMGFTRVQVLRHVVLP 279

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIY 374
           QA+R  I P  S ++  +K++SL   V   D+       ++        +E+ ++   +Y
Sbjct: 280 QALRVTIAPTVSNFIGAVKDTSLVAIVNIYDITGSLKMAMSDPHWIAYFVEMYMVVCTVY 339

Query: 375 LSLSIMIALFMNRLNAKIALK 395
           L + + IA +   L ++ AL+
Sbjct: 340 LLIGLGIARYGRFLESRYALQ 360



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T +LA    +    +G L+  GR S+  L+  +C  ++E  R +P + ++FF 
Sbjct: 152 LWGGLPLTLFLAVIACLAGVPLGILLALGRRSSLPLIRILCTGFIEAVRGVPLITLLFFG 211

Query: 149 YKSVLSVLPIPDHSIVL 165
              +  ++P       +
Sbjct: 212 AFVLPMLVPAQWRVDPM 228


>gi|172062269|ref|YP_001809920.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171994786|gb|ACB65704.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 223

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 13/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L      +     + V +  +G+VL      L+        +    L
Sbjct: 1   MNYHFDFSFLAGSLGALLDGLKVTVVLAVAANAMGLVLGFVLCLLA-MSRWAIVRWPAQL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I  F     P L+ I   +              +             +AL     AF A
Sbjct: 60  FIEFF--RCTPALLQIIWFFYCI----------PMMVDVFIDPIAMGVLALGLNLTAFNA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+G+ AVP+  ++AA+ALGL   + T  V+LPQA+R+ +P L +  +  L+ S+L  
Sbjct: 108 EAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRTAMPVLLTNGIGSLQQSALVA 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V  ADL+ V  +I  +  + +E   +   +Y +LS+ IA  ++ +  +  +  ++
Sbjct: 168 IVAVADLMYVAKSIATEAYRPLETYSVVALVYFALSLPIAKLVHVIERRQDVAVQR 223



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV---V 144
           A+L G   T  LA +      ++G ++    +S   +V W  ++++E FR  P L+    
Sbjct: 16  ALLDGLKVTVVLAVAANAMGLVLGFVLCLLAMSRWAIVRWPAQLFIEFFRCTPALLQIIW 75

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
            F+    ++ V   P    VL  G+
Sbjct: 76  FFYCIPMMVDVFIDPIAMGVLALGL 100


>gi|291561847|emb|CBL40647.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [butyrate-producing bacterium SS3/4]
          Length = 219

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 95/213 (44%), Gaps = 15/213 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  +FS  LG++++       R    +    +   YIS  ++ G P ++ + + Y 
Sbjct: 22  QIFVITLLFSLPLGLIVAF-----GRLSKNRVISMIVKFYIS--IMRGTPLMLQLMVVYF 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +       + F           + +I      AA+ AEI RSG+ ++P GQ EAA  L
Sbjct: 75  GPY-------YLFHIKVGSGYRLTATFIGFVINYAAYFAEIYRSGIQSMPIGQYEAAQIL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +    ++LPQ ++ I+P +T++ + L+K++SL+  +  A++ ++   +       
Sbjct: 128 GYTKAQTFFKIILPQVIKRILPSITNEVITLVKDTSLSFTLSVAEMFTIAKALAASQTNM 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I   +     Y   ++++A+ M  +  K+    
Sbjct: 188 IP-FVAAGIFYYVFNLIVAVVMEWIEKKLDYYR 219



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 33/63 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + +  +    ++ +  +G +V  GRLS N++++ I + Y+ + R  P ++ +  +
Sbjct: 13  LASGMLISTQIFVITLLFSLPLGLIVAFGRLSKNRVISMIVKFYISIMRGTPLMLQLMVV 72

Query: 149 YKS 151
           Y  
Sbjct: 73  YFG 75


>gi|293392694|ref|ZP_06637013.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291424811|gb|EFE98021.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 218

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 11/205 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              + S       +L    L      K   AL L+     L  G P L+ + L +     
Sbjct: 19  WTLLLSLTAFFGGTLVTLPLLLLRLSKRRWALRLVRAYAELFQGTPLLMQLFLAF----- 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 F           + +  +AL+ +T+AF+ +I    + A+P+GQ EAA  LGL  
Sbjct: 74  ------FGLALFGIDVSPWAAAALALTLFTSAFLVDIWSGSIAALPKGQWEAARCLGLGF 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    V++PQA+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++ 
Sbjct: 128 GQTLLRVIVPQAVRIAIAPTVGFSVQVIKGTALASIIGFVELTKAGTMLNNVTYQPFKVF 187

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
            +    Y  +   ++ + + L  K 
Sbjct: 188 GLVALGYFLMCYPLSRYSHYLEKKF 212


>gi|154174776|ref|YP_001408465.1| glutamineABC transporter membrane-spanning permease [Campylobacter
           curvus 525.92]
 gi|112802739|gb|EAU00083.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter curvus 525.92]
          Length = 217

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        +    LT++      +FS ++G+  +L      +         +PL+
Sbjct: 1   MDFEFIAKFYPMYVKAAMLTINIAFWGILFSLIVGMFCTLVKFYKVKFL-------IPLI 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   + L++  P L              F    I L+    +++A
Sbjct: 54  NCYIELSRNTPLLIQL---FFLYYGLPKL--------GVQIGSFTCAVIGLTFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R G  AV + Q+EA +++GL+  +  R V++PQA    +P +++  + LLK +S+  
Sbjct: 103 ESFRLGFEAVRKSQIEAGLSIGLSQNQLLRYVIVPQAFGVSLPSISANVIFLLKETSIVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            V  ADLV V   II    +  E + + +  YL L + I+L +  L  ++ +  
Sbjct: 163 IVALADLVYVAKDIIGLYYKTDEALFMLVVSYLILILPISLALTWLEKRMRVAR 216


>gi|167897973|ref|ZP_02485375.1| histidine transport system permease protein [Burkholderia
           pseudomallei 7894]
          Length = 235

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 78/186 (41%), Gaps = 3/186 (1%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            ++R    +       LY  T++  G P  V + L Y   +   V+    ++  S     
Sbjct: 43  AIARASRNRAVSGAVWLY--TYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWL-DSFFRSA 99

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
                +A +    A+  EI    + +   G++EA +A G++  K    V+LP A+R  +P
Sbjct: 100 MNCTLLAFTLNECAYATEIFAGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALP 159

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             +++ + +L  ++LA      D++ V   + + T  + +   I   +Y  +   +    
Sbjct: 160 SYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIWLF 219

Query: 386 NRLNAK 391
            R+ A+
Sbjct: 220 RRMEAR 225



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 66/218 (30%), Gaps = 9/218 (4%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y    L G   T WL          +   +   R S N+ V+    +
Sbjct: 5   IGQYWQNYLFSDGYR---LSGLAITLWLLVV--SLGLGLAVPLAIARASRNRAVSGAVWL 59

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH+ +  F     N  L   TL     A    
Sbjct: 60  YTYVFRGTPLYVQLLLCYTGIYSLSVVHDHAWLDSFFRSAMNCTLLAFTLNECAYATEIF 119

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  +         L+L A        
Sbjct: 120 AGAIKSTAPGEIEAGLAYGMSRFKLYTRVILPSALRRALPSYSNEVILMLHATTLAFTAT 179

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA + Y     A I 
Sbjct: 180 VPDILKVTRDVNSATYASFQAYGIAAALYAVVVFALIW 217


>gi|134098325|ref|YP_001103986.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338]
 gi|291004255|ref|ZP_06562228.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338]
 gi|133910948|emb|CAM01061.1| glutamate permease [Saccharopolyspora erythraea NRRL 2338]
          Length = 291

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/244 (21%), Positives = 105/244 (43%), Gaps = 19/244 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF---ATRLSRHFHEKTG 216
            +                   + +       V +F  G VL+L       L R       
Sbjct: 39  FYQTGQFDASKWEWLLYEQIQVELVRALGNTVGAFATGAVLALAFGAVFALGRLSDHAWL 98

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +      +  F       + L+ L + L++  P        G      ++ S+ + L+ Y
Sbjct: 99  RVPCAGIVEFFR-----AIPLVILIFFLYYAAP--------GLGVNFGQYWSVVLGLTLY 145

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             + +AE+ R+G+ A+PRGQ EAA ++G+   +  R V+LPQ++R ++P + SQ + LLK
Sbjct: 146 NGSVLAEVFRAGVNALPRGQTEAAYSIGMRKNQVMRFVVLPQSVRMMLPAIISQLVVLLK 205

Query: 337 NSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +S+L   + + +L+     +          I + ++   +Y+S+ +++  F N L+ +  
Sbjct: 206 DSALGFLITYQELLYYARYLGGVPTLDRPIIPVSMVVAALYISMCLLLTWFANFLDRRNR 265

Query: 394 LKEK 397
             +K
Sbjct: 266 RGKK 269



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 2/125 (1%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
             +   F+  +    +         ++    NT     +G + A   G +   GRLS + 
Sbjct: 39  FYQTGQFDASKW--EWLLYEQIQVELVRALGNTVGAFATGAVLALAFGAVFALGRLSDHA 96

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
            +   C   VE FR IP +++IFFLY +   +         +  G+ L N  +       
Sbjct: 97  WLRVPCAGIVEFFRAIPLVILIFFLYYAAPGLGVNFGQYWSVVLGLTLYNGSVLAEVFRA 156

Query: 184 DTNAK 188
             NA 
Sbjct: 157 GVNAL 161


>gi|197294963|ref|YP_002153504.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|254250401|ref|ZP_04943720.1| hypothetical protein BCPG_05293 [Burkholderia cenocepacia PC184]
 gi|124879535|gb|EAY66891.1| hypothetical protein BCPG_05293 [Burkholderia cenocepacia PC184]
 gi|195944442|emb|CAR57044.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 240

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 1/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + +    +   A   ++    +T + L  LY + F       LV+    +  
Sbjct: 23  LMTVALTLAALAVGAVIGAAIAAAKLSRYRTLRLLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G
Sbjct: 82  STLVTAVGQWFGAEGFIGVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+       N T Q  
Sbjct: 142 MPRSMVLRRILVPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +     NR  A +    ++
Sbjct: 202 VFFVAGGALYLLMTGLSNRVFNRAEAIVGRSFRR 235


>gi|42779691|ref|NP_976938.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
 gi|42735608|gb|AAS39546.1| amino acid ABC transporter, permease protein [Bacillus cereus ATCC
           10987]
          Length = 217

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 12/185 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R       + +   YI  F    +P LV + L +   F  P       I         
Sbjct: 43  IIRTSKITILRFISRTYIELF--RSIPILVWLFLFF---FGLP-------ITLGIDVSST 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++   ALS +    I EIVR  L ++P+GQ+EA  ++G+  ++  + VL+PQA+R +IP 
Sbjct: 91  VAAITALSLWGITEIGEIVRGALQSLPKGQVEAGKSIGMNKKQLYQYVLIPQAIRRMIPA 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             + ++ +++ +SL V +G  +++  G  I+ +TG+A  I       Y  L   ++++  
Sbjct: 151 TINIFIRIIQTTSLTVLIGVTEVIKAGQQIVERTGEAFLIYGCLFIFYFLLCYPLSIWSR 210

Query: 387 RLNAK 391
           +L  +
Sbjct: 211 KLETR 215



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   +I +TI G L G  R S   ++ +I R Y+E+FR+IP LV +F  
Sbjct: 16  LLKGLEQTLLIACFTIIISTIGGILFGIIRTSKITILRFISRTYIELFRSIPILVWLFLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|119945247|ref|YP_942927.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119863851|gb|ABM03328.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 223

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 14/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   + V S +LGIV+++    L +    K    +  ++I T           + L Y 
Sbjct: 23  FTTIHVSVLSMLLGIVIAVLL-ALGKMSDSKVFYNMANIWIETARNLPA-----LFLIYM 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F            G  +SP F S++ AL    A ++AE  R G  ++P  Q  AA +L
Sbjct: 77  AYFGL-------GAYGIHLSPYF-SVFSALVFINAGYLAETFRGGFQSIPTTQYSAAKSL 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   K  R V+LPQ  R I  P+T+Q++  +  SSL + VG  +L      + + + + 
Sbjct: 129 GMNSLKVYRHVILPQMFRRIYHPMTNQFVWSILMSSLGILVGMNELSGETQRLQSTSFRT 188

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +E  ++   +Y  ++ ++ L    +  K+
Sbjct: 189 LEFFIVAAAMYFVITKLVLLASGLIAKKV 217



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 35/70 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   M+   +I  L+  G++S +K+   +  +++E  RN+P L +I+  
Sbjct: 18  LLSGAFTTIHVSVLSMLLGIVIAVLLALGKMSDSKVFYNMANIWIETARNLPALFLIYMA 77

Query: 149 YKSVLSVLPI 158
           Y  + +    
Sbjct: 78  YFGLGAYGIH 87


>gi|152987100|ref|YP_001348448.1| putative amino acid permease [Pseudomonas aeruginosa PA7]
 gi|150962258|gb|ABR84283.1| probable amino acid permease [Pseudomonas aeruginosa PA7]
          Length = 225

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 18/201 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            S VLG+VL +    L        GK   LL         +P L    L +  +F  P++
Sbjct: 39  VSAVLGLVLGVALAVL-------PGKPRLLLVTLLGFFRAIPVL---MLIFWTYFLLPIV 88

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              +        P   ++  ALS    A++A  V +G+ ++P GQ  AA ALGL   +  
Sbjct: 89  FHVDV-------PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQVL 141

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIW 370
           RLV+LPQA+  ++P   +Q+++L+K++SLA  +G  +L  V   + N+      EI L  
Sbjct: 142 RLVILPQALPVMLPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLFV 201

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
             +Y      + LF   L+ +
Sbjct: 202 ALLYFLFCTSLDLFAGFLSRR 222


>gi|10954823|ref|NP_053243.1| hypothetical protein pTi-SAKURA_p004 [Agrobacterium tumefaciens]
 gi|16119838|ref|NP_396543.1| ABC transporter, membrane spanning protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
 gi|462723|sp|P35118|NOCQ_AGRT5 RecName: Full=Nopaline transport system permease protein nocQ
 gi|154754|gb|AAA50512.1| transport protein [Agrobacterium tumefaciens]
 gi|6498176|dbj|BAA87628.1| tiorf3 [Agrobacterium tumefaciens]
 gi|15163492|gb|AAK90984.1| ABC transporter, membrane spanning protein (nopaline)
           [Agrobacterium tumefaciens str. C58]
          Length = 236

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 9/227 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                  +       +T+   A  + F  + G + +  A +LSR +  +      L  + 
Sbjct: 8   WGDAGWGDELARGAMMTVVVAACSYFFGIIFGSLFA--AAKLSRFWSLRL-----LGDVY 60

Query: 226 TFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           T ++ G+P L++I L +       + +        G    P F+   + +S    A+  E
Sbjct: 61  TTVVRGVPELLIIFLVFFGGGTLLRTIANGLFGYEGYIEPPIFVIGVLCISVSAGAYATE 120

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R+ ++AVP GQ+EAA ++G+      R VL+PQA R  +P L + +   LK++SL   
Sbjct: 121 VIRAAVLAVPPGQIEAAKSIGMGPWLRLRRVLIPQAARFALPGLGNVWQFTLKDTSLISV 180

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           VG  +++         T Q     +    I+L LS +      +   
Sbjct: 181 VGLVEIMRTAAMGAGSTKQPFTFYITAFVIFLLLSSVSNRGFLKAEK 227



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 1/140 (0%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  G + T  +A        I G+L  A +LS    +  +  VY  V R +P L++
Sbjct: 13  WGDELARGAMMTVVVAACSYFFGIIFGSLFAAAKLSRFWSLRLLGDVYTTVVRGVPELLI 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           IF ++    ++L    + +    G ++         L +  +A  +    +   VL++  
Sbjct: 73  IFLVFFGGGTLLRTIANGLFGYEG-YIEPPIFVIGVLCISVSAGAYATEVIRAAVLAVPP 131

Query: 205 TRLSRHFHEKTGKALPLLYI 224
            ++        G  L L  +
Sbjct: 132 GQIEAAKSIGMGPWLRLRRV 151


>gi|238920411|ref|YP_002933926.1| arginine transporter permease subunit ArtM [Edwardsiella ictaluri
           93-146]
 gi|238869980|gb|ACR69691.1| octopine transport system permease protein OccM [Edwardsiella
           ictaluri 93-146]
          Length = 223

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 84/185 (45%), Gaps = 3/185 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +     PL+     L  G P LV I L Y        +    ++  +   P ++   +AL
Sbjct: 41  RPLILTPLVQGYITLFTGTPLLVQIFLIYYGPGQFAWIRDTPWLWSALSQP-WLCAMLAL 99

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG++  +    +LLP A +  +   +++ + 
Sbjct: 100 ALNSAAYSTQLFYGAMRAIPNGQWQSCAALGMSKAQTL-RILLPYAFKRALSSYSNEVVL 158

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K++SLA  +   +++     +  +T   + +      +YL ++ ++ L M  +  +  
Sbjct: 159 IFKSTSLAYTITLMEVMGYAQQLYGRTYDVM-VFGAAGLVYLCVNGLLTLMMRMIERRAL 217

Query: 394 LKEKK 398
             E++
Sbjct: 218 AFEQR 222


>gi|319404358|emb|CBI77958.1| ABC transporter, permease protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 235

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 5/215 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                K+   S  +G++L +  T   R  + K  + L   YI  F     P L  + L Y
Sbjct: 26  FIVTLKLVSISCSIGLLLGILIT-FIRLSNNKPLQYLARAYIYFF--RSSPLLAQLFLFY 82

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                     Q   +     +  +  L+I  S  +AA+ AEI R  L+AV   Q EA+ A
Sbjct: 83  YGLGSLSSFWQQIGLWWFFQNAWYCCLFI-FSLNSAAYQAEIFRGSLLAVAAEQREASKA 141

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL        ++ PQAM   + PL ++++ + K+S++A  V   DL+     I ++T  
Sbjct: 142 LGLNRSTTFFKIIFPQAMVVALRPLGNEFILMTKSSAIASLVTVYDLMGTTKLIYSRTFD 201

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             ++ +    IYL +  +I   +  +   +    +
Sbjct: 202 -FQVYVWAAIIYLIIVELIHRVIILIEHYLTRYLR 235



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y+  +  GF+ T  L         ++G L+   RLS NK + ++ R Y+  FR+ P L 
Sbjct: 17  RYSLKLFDGFIVTLKLVSISCSIGLLLGILITFIRLSNNKPLQYLARAYIYFFRSSPLLA 76

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +F  Y  + S+        +  +  F N         ++++ A
Sbjct: 77  QLFLFYYGLGSL--SSFWQQIGLWWFFQNAWYCCLFIFSLNSAA 118


>gi|227499009|ref|ZP_03929146.1| ABC amino acid transporter permease [Acidaminococcus sp. D21]
 gi|226904458|gb|EEH90376.1| ABC amino acid transporter permease [Acidaminococcus sp. D21]
          Length = 229

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 5/212 (2%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQL 244
              + +F  +L +V  L    L   + ++  + +   Y I    I   P +V + + Y  
Sbjct: 11  YLSVTLFVTLLSVVPGLILAALLAVWKDQGSRIVSGGYRIFISFIRSTPFIVQLFVVY-- 68

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L     +  S + P    L I  + + A + AEI+R  L A+  G+ EAA +LG
Sbjct: 69  -FGVPQLLSGAGVDVSDLPPLLFVLVI-FALHVAGYGAEILRGSLAAIQPGEKEAAASLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++LPQA    IPPL ++ ++ LK ++L   VG  D++     +   + + +
Sbjct: 127 MTDAQIYRRIVLPQAFVLSIPPLVNEVISTLKGTALIFNVGIVDVMRQAELMGGNSQRYL 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E+ +    +Y ++   + L    L     + E
Sbjct: 187 ELYVDVAILYGAMIFALTLLGRALEHHFRISE 218


>gi|226330765|ref|ZP_03806283.1| hypothetical protein PROPEN_04685 [Proteus penneri ATCC 35198]
 gi|225201560|gb|EEG83914.1| hypothetical protein PROPEN_04685 [Proteus penneri ATCC 35198]
          Length = 222

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 6/227 (2%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +      + T+  +   + ++   LS+  T             +   YI+ F   G
Sbjct: 1   MWDYIVDILPGLPTSLSLTFVALLVAFTLSVLMT-FVLALKTPVISQIVKAYITLFT--G 57

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P LV   L Y      PVL  F  +     +P F    + L+  +AA+   +    + A
Sbjct: 58  TPLLVQFFLIYYGPGQFPVLKNFPTMWELLSTPWF-CAMVTLALNSAAYSTLLFYGAVRA 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ ++  ALG++  +    V+LP A +  +   +++ + + K++SLA  +   +L  
Sbjct: 117 IPSGQWQSCQALGMSPVQT-ARVILPYAFKRALSSYSNEVVLIFKSTSLASTITLLELTG 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +  Q+   + + +    IYL ++ ++ L M  +  K    E +
Sbjct: 176 YSRQVFGQSYDVM-VFVAAGIIYLCINGILTLLMRLIEKKALEFEHR 221



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 38/116 (32%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   IL G   +  L F  ++ A  +  L+         +++ I + Y+ +F   P L
Sbjct: 2   WDYIVDILPGLPTSLSLTFVALLVAFTLSVLMTFVLALKTPVISQIVKAYITLFTGTPLL 61

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           V  F +Y        + +   +           +    L     + +  +  V  I
Sbjct: 62  VQFFLIYYGPGQFPVLKNFPTMWELLSTPWFCAMVTLALNSAAYSTLLFYGAVRAI 117


>gi|160945458|ref|ZP_02092684.1| hypothetical protein FAEPRAM212_02982 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443189|gb|EDP20194.1| hypothetical protein FAEPRAM212_02982 [Faecalibacterium prausnitzii
           M21/2]
          Length = 215

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 13/197 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG+V++  +    R                 ++I G P ++ I + Y      P L   N
Sbjct: 27  LGLVVAFGSMSRCRLLSGAV-------KTFVWVIRGTPLMLQIIVIY----LGPGLLGMN 75

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               S      ++  +A +   A + +EI R G+ AVP+GQ EA   LG+T  +    V 
Sbjct: 76  NPWPSGSGGRMVAAVVAFAINYACYFSEIYRGGIEAVPKGQTEAGQVLGMTRTQIFFKVT 135

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L Q ++ I+PP+ ++ + L+K++SLA  +   +++ +      +    I  +      +L
Sbjct: 136 LLQVVKRILPPMGNEIITLVKDTSLANTIANKEIIMMAKEYSAK--GLIWPLFSTALFFL 193

Query: 376 SLSIMIALFMNRLNAKI 392
                + L  N    K+
Sbjct: 194 VFVGALTLLFNWAEKKL 210


>gi|148544726|ref|YP_001272096.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri DSM 20016]
 gi|184154078|ref|YP_001842419.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|194466985|ref|ZP_03072972.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|227363851|ref|ZP_03847956.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|227544433|ref|ZP_03974482.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300908280|ref|ZP_07125745.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|325683061|ref|ZP_08162577.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
 gi|148531760|gb|ABQ83759.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus reuteri DSM 20016]
 gi|183225422|dbj|BAG25939.1| glutamine ABC transporter permease component [Lactobacillus reuteri
           JCM 1112]
 gi|194454021|gb|EDX42918.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus reuteri 100-23]
 gi|227071078|gb|EEI09396.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM2-3]
 gi|227185596|gb|EEI65667.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri CF48-3A]
 gi|300894527|gb|EFK87884.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri SD2112]
 gi|324977411|gb|EGC14362.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus reuteri MM4-1A]
          Length = 217

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 108/217 (49%), Gaps = 2/217 (0%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +D  + I +   + G+ +++  + +S       G  L ++  +           +I
Sbjct: 1   MQNFIDAYSWINIRFLLEGLWITIEVSVISIIISFILGTFLGIIRYANIKYLSAIVGFII 60

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            +   L     +   +  +    + PE + +  +ALS + +A +AEIVRSG+ ++  GQ 
Sbjct: 61  DIIRNLPLLLIIFFTYFGLPNIGIKPEIIPAAIMALSIFESAMVAEIVRSGINSIDYGQT 120

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E A+A GLT  +A R+++LPQA+++++P L SQ+++L+K++SLA  +   +L+     I 
Sbjct: 121 EGALANGLTKWQALRIIVLPQAIKNMMPALVSQFISLVKDTSLATIIVLPELMYHAQIIY 180

Query: 358 NQ-TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            Q T   I + +    +Y  +   ++L    L+  IA
Sbjct: 181 GQNTNYIIPMFVALAVLYFIVCYSLSLVARYLHKHIA 217



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 40/79 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   T  ++   +I + I+GT +G  R +  K ++ I    +++ RN+P 
Sbjct: 9   SWINIRFLLEGLWITIEVSVISIIISFILGTFLGIIRYANIKYLSAIVGFIIDIIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIPD 160
           L++IFF Y  + ++   P+
Sbjct: 69  LLIIFFTYFGLPNIGIKPE 87


>gi|317053831|ref|YP_004117856.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951826|gb|ADU71300.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 245

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 12/225 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF- 227
           M      L     T    A + +   +L  VL++    L+          L  L      
Sbjct: 1   MSYQWLTLWNYGETFLAAAWLTLQVTLLAFVLAVTLGLLAALAKAAALAPLRWLSHCYVE 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I   P L+ I + +           F           F +  +AL     A+++E  R+
Sbjct: 61  FIRNTPVLLQIFIIF-----------FGLPSLGITMSAFTAGVLALGINVGAYLSETFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ +VP+GQ+EAA  LG+  R+    V+LPQA R++ P + +  + LL  +SL  A+   
Sbjct: 110 GIQSVPKGQLEAAWILGIPRRQVFLSVVLPQAARAVWPAIINNLIQLLLGTSLLSAIALP 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L      I  +T   I+   +   +YL LS + +   +    ++
Sbjct: 170 ELTGTATVINARTLLYIQTFSVVALVYLLLSNLFSWLGSLAGRRM 214



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 8/166 (4%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + +  +Y    L     T  +     + A  +G L    + +A   + W+   YVE  
Sbjct: 3   YQWLTLWNYGETFLAAAWLTLQVTLLAFVLAVTLGLLAALAKAAALAPLRWLSHCYVEFI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFS 193
           RN P L+ IF ++  + S+             + +N       T      +        +
Sbjct: 63  RNTPVLLQIFIIFFGLPSLGITMSAFTAGVLALGINVGAYLSETFRAGIQSVPKGQLEAA 122

Query: 194 FVLGI-----VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
           ++LGI      LS+   + +R         L  L + T L+  +  
Sbjct: 123 WILGIPRRQVFLSVVLPQAARAVWPAIINNLIQLLLGTSLLSAIAL 168


>gi|300715446|ref|YP_003740249.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299061282|emb|CAX58391.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 222

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + V G+ L +    L         +   L      LI   
Sbjct: 11  WPYWPELLSGLWVTIQLTVLATVGGVSLGILGAALRSGKPSLVSR---LWGGYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPNLGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT  +    V+LP +++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLTRLQTFMRVVLPPSLKRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              I ++T  + E+ L+   IYL+LSI++   +
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLIYLALSIVMRQLL 209



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G   T  L     +    +G L  A R     LV+ +   YVE+ 
Sbjct: 5   LNFPALWPYWPELLSGLWVTIQLTVLATVGGVSLGILGAALRSGKPSLVSRLWGGYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLIN 100


>gi|170016505|ref|YP_001727424.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
 gi|169803362|gb|ACA81980.1| ABC-type amino acid transport system, permease component
           [Leuconostoc citreum KM20]
          Length = 219

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 19/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+  +    + S + G V+ +       +F +  G           +   +
Sbjct: 16  MYLLGGLGITVGVSIISVILSLIFGSVVGIIQFERLPYFSKFVG----------TINNVI 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+ + + ++F  P +            P F +  +A+S + +A +AEIVR GL ++
Sbjct: 66  RNLPLLLIIFFVYFALPKI--------GIHLPIFWATVVAMSTFESAMLAEIVRGGLESI 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ E A A GL++ +    ++LPQA + +IPP+ SQ ++L+K++SLA+ +  A++   
Sbjct: 118 DIGQFEGARANGLSNMQTMIYIILPQAYKKMIPPIISQLISLVKDTSLAMGIVLAEMTYR 177

Query: 353 GGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              I  Q     I +++    +Y  L+  ++L     + K+A
Sbjct: 178 SQIIYAQNSTYIIPVLVAITLVYFVLNYGLSLIARWADHKLA 219



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 33/77 (42%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G   T  ++   +I + I G++VG  +       +        V RN+P L++IF
Sbjct: 16  MYLLGGLGITVGVSIISVILSLIFGSVVGIIQFERLPYFSKFVGTINNVIRNLPLLLIIF 75

Query: 147 FLYKSVLSVLPIPDHSI 163
           F+Y ++  +        
Sbjct: 76  FVYFALPKIGIHLPIFW 92


>gi|227514871|ref|ZP_03944920.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227086718|gb|EEI22030.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 237

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 19/226 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +  +  + V  F L  VL +    L R    +        YIS   + G+
Sbjct: 28  FDSLPTILSGLPMSLFLLVVCFALANVLGILIM-LMRTSSHRFLSWPARFYISF--LRGI 84

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV++ + Y                         +  ++ +   AAFIAE  RS  + V
Sbjct: 85  PMLVILFITYFGF----------------NMAALPAAILSFTIAPAAFIAEYYRSAFLGV 128

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA +LGL +      V+LPQA R  +P L +  L+L K +SLA  +  +++   
Sbjct: 129 DEGQFEAARSLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKGTSLAAMITVSEMFME 188

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +       + I ++   IY  +  +++   + L   +A   K+
Sbjct: 189 AKVVAGAAQDYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLATWSKE 234



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   + +L       A ++G L+   R S+++ ++W  R Y+   R IP LV++F  
Sbjct: 34  ILSGLPMSLFLLVVCFALANVLGILIMLMRTSSHRFLSWPARFYISFLRGIPMLVILFIT 93

Query: 149 YKSV 152
           Y   
Sbjct: 94  YFGF 97


>gi|166366535|ref|YP_001658808.1| amino acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
 gi|166088908|dbj|BAG03616.1| amino acid ABC-transporter permease protein [Microcystis aeruginosa
           NIES-843]
          Length = 331

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 18/259 (6%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           F N P  +  ++    +L++  I    +   F   +    LS   LT+       + SF 
Sbjct: 88  FPNCPAFLQRWWGLLWLLTLPLIAWLLLGGLFLKAIPLDDLSGLILTLLVAIASMILSFP 147

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG++L+L      R       + L + YI       L  L L+ + +      P++    
Sbjct: 148 LGVLLAL-----GRQSELPAIRWLSIGYIEL-----LRGLPLLGILFMAQVMLPLI---- 193

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
            +   T     +      + + AA++AE VR GL A+P+GQ+EAA ALGL       L++
Sbjct: 194 -LPAGTRPERVIRAIAGFTLFAAAYLAENVRGGLQAIPKGQIEAAKALGLKPIFVLLLIV 252

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMF 372
           LPQA++++IP +  Q+++L K++SL   VG  DL+ + G+++      G   E+ L   F
Sbjct: 253 LPQALKAVIPAIVGQFISLFKDTSLLAIVGLVDLLGMAGSVLANPKFIGDYPEVYLFLAF 312

Query: 373 IYLSLSIMIALFMNRLNAK 391
           IY      ++L   RL  +
Sbjct: 313 IYWIFCYSMSLASRRLEQR 331



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 68/202 (33%), Gaps = 19/202 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  +A + MI +  +G L+  GR S    + W+   Y+E+ R +P L ++F   
Sbjct: 128 LSGLILTLLVAIASMILSFPLGVLLALGRQSELPAIRWLSIGYIELLRGLPLLGILFMAQ 187

Query: 150 KSVLSVLPIPDHS------------IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             +  +LP                     +       GL          AK      +  
Sbjct: 188 VMLPLILPAGTRPERVIRAIAGFTLFAAAYLAENVRGGLQAIPKGQIEAAKALGLKPIFV 247

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++L +    L        G+ + L             L ++ L   L     VL    FI
Sbjct: 248 LLLIVLPQALKAVIPAIVGQFISL-------FKDTSLLAIVGLVDLLGMAGSVLANPKFI 300

Query: 258 GGSTVSPEFMSLYIALSCYTAA 279
           G       F++    + CY+ +
Sbjct: 301 GDYPEVYLFLAFIYWIFCYSMS 322


>gi|10954672|ref|NP_066607.1| hypothetical protein pRi1724_p027 [Agrobacterium rhizogenes]
 gi|10567336|dbj|BAB16145.1| riorf26 [Agrobacterium rhizogenes]
          Length = 220

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 13/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +  + V   V+G VL+ F   ++R       + L   +I   +I  +P + L+ L Y 
Sbjct: 15  PVSLGVAVGGIVIGCVLACFL-VMARLSRNNVSRFLS--WIFLEIIRCIPMIALLFLLYY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                  L QF+ +  S   P          IALS    A+I+EI R G+++VP G++ A
Sbjct: 72  ------GLSQFSAVRSSIFWPILREPLWCAIIALSLKACAYISEIYRIGIMSVPEGEILA 125

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + G    +  R +++  A R ++P L+++++ L+K SSLA  +   D+  +   + ++
Sbjct: 126 ARSFGFKGFRLYRSIIVSHAARIVLPALSNEFVVLIKASSLASLITLMDITGLASGLASE 185

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             Q +  + +    YL  + ++      L  ++A+
Sbjct: 186 LFQPLPALTVAAIYYLVFNTLVLSAFQHLERRLAI 220


>gi|114707669|ref|ZP_01440564.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536913|gb|EAU40042.1| amino acid ABC transporter, permease protein [Fulvimarina pelagi
           HTCC2506]
          Length = 235

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 3/213 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + V +  +G+ +      L++   ++       +Y + F   GLP L+ + L Y 
Sbjct: 23  FVTGSLAVCTLPIGLAVGFLL-ALAKQSGDRLLFISANIYTTIF--RGLPELLTLFLVYF 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              +                  F+S  IAL    +A+ +E+  +   A+PRGQ E A AL
Sbjct: 80  GVNNLLKSFSDATGLPDIALSSFVSGMIALGLVFSAYASEVFVAAFRAIPRGQYEGANAL 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+      RLV+ PQ +R  +P L++ ++ LLK+++L   +G  D++         T + 
Sbjct: 140 GIGSFMTMRLVIFPQLVRIALPGLSNLWMILLKDTALVSVIGLTDILRQSQIAARVTREP 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                  + +YL L+++ ++ + R++      E
Sbjct: 200 FLFFGTAILLYLVLTLISSIAIGRIDQWSKRGE 232



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 68/191 (35%), Gaps = 22/191 (11%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G   T  LA   +     +G L+   + S ++L+     +Y  +FR +P L+ 
Sbjct: 14  WGDDIAHGVFVTGSLAVCTLPIGLAVGFLLALAKQSGDRLLFISANIYTTIFRGLPELLT 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLF 203
           +F +Y  V ++L     +  LP                      I + SFV G++ L L 
Sbjct: 74  LFLVYFGVNNLLKSFSDATGLPD---------------------IALSSFVSGMIALGLV 112

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
            +  +        +A+P          G+ + + + L       +  L   + +    + 
Sbjct: 113 FSAYASEVFVAAFRAIPRGQYEGANALGIGSFMTMRLVIFPQLVRIALPGLSNLWMILLK 172

Query: 264 PEFMSLYIALS 274
              +   I L+
Sbjct: 173 DTALVSVIGLT 183


>gi|54293481|ref|YP_125896.1| hypothetical protein lpl0530 [Legionella pneumophila str. Lens]
 gi|53753313|emb|CAH14760.1| hypothetical protein lpl0530 [Legionella pneumophila str. Lens]
          Length = 215

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 95/209 (45%), Gaps = 19/209 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       +   +LG +LS+   +         G A  ++     ++ G P ++ ++  Y
Sbjct: 19  MQLLTGGMLIGVLLGTLLSICRHQ---------GVACFVINRFISILRGTPLILQLSFIY 69

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  PVL               ++  +A    ++A+ AEI+R+G+ ++P+GQ EAA+ 
Sbjct: 70  ---FAVPVLLGM-------RPSILVAGIVAFGLNSSAYFAEILRAGIESLPKGQFEAALT 119

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L +      + ++LPQ  R+I P + ++ + LLK ++L   +G  DL+    T+  Q   
Sbjct: 120 LQIPTFYLWKDIILPQVARNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFT 179

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + I  F Y SL +++     ++  +
Sbjct: 180 YFMPLCITGFYYYSLVLLLEALGKKIEKR 208


>gi|328887002|emb|CCA60241.1| glutamate permease [Streptomyces venezuelae ATCC 10712]
          Length = 304

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 17/242 (7%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
                     G   +   L     T+       V +  LG +L +     SR    ++ +
Sbjct: 50  WTKWEPFFTDGRVWDTYILPALKNTVIAAGLAMVIALPLGALLGV-----SRLSDHRSVR 104

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +    +  F    +  L+L A                F   S  +    ++   L  Y 
Sbjct: 105 VVAGTVVEFFRAIPVLILMLFANAAY----------SEFTDISPETRPLYAVVTGLVLYN 154

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A+ +AE+VR+G++A+P GQ +AA A+G+   +    VLLPQ++ +++P L SQ + ++K+
Sbjct: 155 ASVLAEVVRAGILALPTGQTDAAKAIGMRKGQTMTYVLLPQSVTAMLPALVSQLVVIVKD 214

Query: 338 SSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++L    +GF++L++    +    G   I    +   +++ L+  +  F   L  ++   
Sbjct: 215 TALGGALLGFSELLASVRPMSANYGANTIACFTVVAVLFVLLNFALTTFAAWLEGRLRRG 274

Query: 396 EK 397
           ++
Sbjct: 275 KR 276



 Score = 56.5 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 36/77 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T    + T IL    NT   A   M+ A  +G L+G  RLS ++ V  +    VE FR 
Sbjct: 57  FTDGRVWDTYILPALKNTVIAAGLAMVIALPLGALLGVSRLSDHRSVRVVAGTVVEFFRA 116

Query: 139 IPPLVVIFFLYKSVLSV 155
           IP L+++ F   +    
Sbjct: 117 IPVLILMLFANAAYSEF 133


>gi|303256339|ref|ZP_07342355.1| general amino acid ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|330999034|ref|ZP_08322759.1| general L-amino acid transport system permease protein AapM
           [Parasutterella excrementihominis YIT 11859]
 gi|302861068|gb|EFL84143.1| general amino acid ABC transporter, permease protein
           [Burkholderiales bacterium 1_1_47]
 gi|329575776|gb|EGG57302.1| general L-amino acid transport system permease protein AapM
           [Parasutterella excrementihominis YIT 11859]
          Length = 366

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 14/235 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G F  ++        +     + +F       L +    L R       + L + YI
Sbjct: 132 MLGGCFGLSKIDPDYWGGLPLTIILTLFGMTASTPLGILL-ALGRRSKMSAIRMLCIGYI 190

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L T++ +A      F  P++    F         F  + I +  +  A++AE 
Sbjct: 191 ELVRGVPLITVLFVA-----SFIFPLILPPGF-----RIDAFWRIVIGIVLFQTAYMAET 240

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL  +P+GQ EAA +LGL+  +    V+LPQA+ ++IP   +  L+   ++SL   V
Sbjct: 241 IRGGLQTIPKGQYEAAASLGLSKYQIYTSVILPQALVTVIPAFVNNLLSTFMDTSLVTIV 300

Query: 345 GFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              DL       +   N     +E  L    IY   S++++ +   L  +I   +
Sbjct: 301 SMYDLTGSLRLALGDPNWRNFFLEGYLFIAIIYFVFSLIMSRYSIWLEKRIQRSK 355



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 31/78 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T  L   GM  +T +G L+  GR S    +  +C  Y+E+ R +P + V+F  
Sbjct: 146 YWGGLPLTIILTLFGMTASTPLGILLALGRRSKMSAIRMLCIGYIELVRGVPLITVLFVA 205

Query: 149 YKSVLSVLPIPDHSIVLP 166
                 +LP         
Sbjct: 206 SFIFPLILPPGFRIDAFW 223


>gi|327393301|dbj|BAK10723.1| arginine transport system permease protein ArtQ [Pantoea ananatis
           AJ13355]
          Length = 143

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 66/129 (51%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + +   C+  A+ ++ +R  L AVP GQ E+  ALG+        +++PQ  R  +P L 
Sbjct: 12  VLLLWPCFMLAYASQTLRGALKAVPIGQWESGQALGMKKSAIFFRLIMPQMWRHALPGLG 71

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q+L LLK+++L   +   DL+    +I  +T +     L+   IYL++++     + R+
Sbjct: 72  NQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWFLVAAAIYLAITLFSQAVLRRI 131

Query: 389 NAKIALKEK 397
             +    E+
Sbjct: 132 ELRTTRFER 140


>gi|315640806|ref|ZP_07895906.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483418|gb|EFU73914.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 218

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 15/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F    +   L F    +    ++ + S +L  +       L         + + L   
Sbjct: 1   MSFFDAFSFINLRFLLDGLIVTIEVSLVSIILSFLFGAIMGTLRFSAIPFVSRIVGL--- 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++  +  L L+ + +  +F  P +G    I        F S  IAL+ + +A ++EI
Sbjct: 58  ---IVDIIRNLPLLLIIFFTYFALPQIGIKFDI--------FWSAVIALTIFESAMLSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL AVP+GQMEA ++ GLT+ +    +++PQA RS++P + SQ ++L+K++SLAV +
Sbjct: 107 FRAGLNAVPKGQMEAGLSTGLTYLQVMFSIMIPQAFRSMVPAIVSQLISLVKDTSLAVII 166

Query: 345 GFADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +       I  Q     I + +     Y  +  +++L       K
Sbjct: 167 SLPEFTHNAKIIYGQNSNYVIPMYVALTLGYFVICYLLSLLSKYFETK 214



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 45/102 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G + T  ++   +I + + G ++G  R SA   V+ I  + V++ RN+P L++I
Sbjct: 12  LRFLLDGLIVTIEVSLVSIILSFLFGAIMGTLRFSAIPFVSRIVGLIVDIIRNLPLLLII 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           FF Y ++  +    D        + +    +         NA
Sbjct: 72  FFTYFALPQIGIKFDIFWSAVIALTIFESAMLSEIFRAGLNA 113


>gi|291302057|ref|YP_003513335.1| polar amino acid ABC transporter inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
 gi|290571277|gb|ADD44242.1| polar amino acid ABC transporter, inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
          Length = 242

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 9/228 (3%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH------EKTGKALPLLYIS 225
            +  L    + +       +   VLG+++++      R          +  +  PLL   
Sbjct: 14  WDPLLEGFIIILAVTILASIICLVLGLIVAIALRSGPRWLSAPLFGVMEFIRNTPLLVQL 73

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F  FG+     I +   +            IG       F    I L  + + + AE+ 
Sbjct: 74  FFAWFGIALA--IGVSDTIFTVPTFSIGGWEIGPLDFGGPFFVGVIVLGIHYSTYTAEVY 131

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  VP+GQ EA  AL L  R   + V+LPQA+R +IP L +  +++ K   + +A+G
Sbjct: 132 RAGIDGVPKGQWEAITALSLPKRYGWQHVILPQALRRVIPALGNYIISMFKEVPVLIAIG 191

Query: 346 FADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            AD++             A+E   I   I+L+ S  IA+ M +L  ++
Sbjct: 192 LADMIYKTQEFQAANFAGAVEGYTIAGLIFLAASYPIAVAMRKLENRL 239



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 5/113 (4%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L GF+    +     I   ++G +V     S  + ++      +E  RN P LV +
Sbjct: 14  WDPLLEGFIIILAVTILASIICLVLGLIVAIALRSGPRWLSAPLFGVMEFIRNTPLLVQL 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           FF +  +   + + D    +            +    +D     FV   VLGI
Sbjct: 74  FFAWFGIALAIGVSDTIFTV-----PTFSIGGWEIGPLDFGGPFFVGVIVLGI 121


>gi|15890699|ref|NP_356371.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158968|gb|AAK89156.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 252

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 10/228 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +     +              +    L I L+   + L       T + L L    T L+
Sbjct: 12  YWLLLLIGQYPNGPLGGLANTLILSALAIALAFPVSILMALARLSTWRVLRL--PVTALV 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
           +    + L+ L    +F  P+    +        P F  +   L  Y  AF++E+VR+G+
Sbjct: 70  YVTRGVPLLMLILWTYFLIPLWTGADV-------PSFAIMLATLVVYQGAFLSEVVRAGI 122

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQM+AA ALG ++  A R ++LPQA+ ++IP + S ++  +K+++L   +   DL
Sbjct: 123 VALGVGQMDAAKALGHSYGSAMRFIILPQALYNMIPSMISTFVATIKDTTLGYVINVPDL 182

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                 + NQ   Q  ++ LI   +Y +L   +    N +  +IA + 
Sbjct: 183 TFAASQVNNQLLTQPFQVFLILAVVYYALCWSLTYLANAVERRIARRR 230



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+   +  A  +  L+   RLS  +++       V V R +P L++I + Y
Sbjct: 26  LGGLANTLILSALAIALAFPVSILMALARLSTWRVLRLPVTALVYVTRGVPLLMLILWTY 85

Query: 150 KSVLSV 155
             +   
Sbjct: 86  FLIPLW 91


>gi|294631808|ref|ZP_06710368.1| glutamate permease [Streptomyces sp. e14]
 gi|292835141|gb|EFF93490.1| glutamate permease [Streptomyces sp. e14]
          Length = 308

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 17/258 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV   +        L       +L          L     T+   A   V +  LG    
Sbjct: 32  LVWWVYRGLHDKGQLDWAKWKPLLAGSESWTTYILPGLKNTLIAAALSMVIALPLGAFFG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +     +R       +    + +  F    +P L+L+     L           +   S+
Sbjct: 92  I-----ARLSDHVWVRVPATVVVEFF--RAIPVLILMIFGNALFAQ--------YTDVSS 136

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                 ++   L  Y A+ +AEIVR+G++A+P+GQ EAA A+GL   +    +LLPQA+ 
Sbjct: 137 DDRPLYAVVTGLVLYNASVLAEIVRAGILALPKGQTEAAQAIGLRKTQVMTSILLPQAVT 196

Query: 322 SIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSI 379
           +++P + SQ + ++K+++L  A+  F +L++  G + +  G   I    +   IY+ L+ 
Sbjct: 197 AMLPAIVSQLVVIVKDTALGGAILTFPELLASVGPMSSYYGANTIACFTVVAVIYVVLNF 256

Query: 380 MIALFMNRLNAKIALKEK 397
            +  F + L  ++   +K
Sbjct: 257 ALTSFASWLERRLRRGKK 274



 Score = 66.1 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 49/144 (34%), Gaps = 21/144 (14%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N+   I+  L L  +  W                    L ++   
Sbjct: 3   ASVLYDAQGPRAKRRNVVYSIVFVLALAALVWWVYRG----------------LHDKGQL 46

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +  +         S+ T IL G  NT   A   M+ A  +G   G  RLS +  V     
Sbjct: 47  DWAKWKPLLAGSESWTTYILPGLKNTLIAAALSMVIALPLGAFFGIARLSDHVWVRVPAT 106

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLS 154
           V VE FR IP L+++ F       
Sbjct: 107 VVVEFFRAIPVLILMIFGNALFAQ 130


>gi|86360206|ref|YP_472095.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284308|gb|ABC93368.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 229

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 5/232 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                 +               + V S V G ++++     ++    +  + L   Y + 
Sbjct: 1   MSFTWISSYWPLLLTGAWQTVALLVISVVFGFIIAIGL-AFAQVSGGRLTRLLARGYCTF 59

Query: 227 FLIFGLPTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F   G P L+ +  L Y +    P++      +    +   F    ++ +   AA+ AE+
Sbjct: 60  F--RGTPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEV 117

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L+AVP+G++EA  A GL+  K TR + LP+A+R  +P +  + +  LK + LA  V
Sbjct: 118 LRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKATPLAFTV 177

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              DL +V   +   T    E +L+    YL+L+ +IA  +  L A++ ++ 
Sbjct: 178 TVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVLRGLEAQVPVRR 229



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 41/110 (37%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  SSY   +L G   T  L    ++   II   +   ++S  +L   + R Y   FR 
Sbjct: 3   FTWISSYWPLLLTGAWQTVALLVISVVFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P L+ ++ LY  V S+LP+        F   L               A 
Sbjct: 63  TPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAA 112


>gi|115360582|ref|YP_777719.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115285910|gb|ABI91385.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 240

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 1/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + +    +   A   ++    ++ + L  LY + F       LV+    +  
Sbjct: 23  LMTVALTLAALAVGAVIGAAIAAAKLSRHRSARLLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ R+ ++AV +G++EAA A+G
Sbjct: 82  STLVTTVGQWFGAEGFIGVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+       + T Q  
Sbjct: 142 MPRAMVLRRILVPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +     NR  A +    ++
Sbjct: 202 VFFVAGGALYLVMTGLSNRVFNRAEAIVGRSFRR 235


>gi|227113888|ref|ZP_03827544.1| binding-protein-dependent transport system inner membrane component
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 144

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 81/131 (61%), Gaps = 1/131 (0%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           +  AL+   +A++A  V++G++A+ RGQ +A ++LGL+  +    ++LPQA+R ++P   
Sbjct: 1   MVCALALIASAYLAHGVKAGIVAIGRGQWQAGLSLGLSRWQVLWQIVLPQALRMMVPSFI 60

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNR 387
           +Q+++L+K++SLA  VG  +L  +   + N++    +E+ L    +Y    + + L  N 
Sbjct: 61  NQWISLIKDTSLAYIVGVGELTFLATQVNNRSMVYPMEVFLFVALVYFVFCLSLELLANG 120

Query: 388 LNAKIALKEKK 398
           +N++ + +EK+
Sbjct: 121 VNSRFSQQEKQ 131


>gi|308185787|ref|YP_003929918.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056297|gb|ADO08469.1| putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 222

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V +   G+ L +    L         +   L  I   LI   
Sbjct: 11  WPYWPELLSGLWVTIQLTVLATTGGVALGIAGAALRSGKPSWMSR---LWGIYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPALGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT  +    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLTRSQTFLRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I ++T  + E+ L+   IYL+LSI +   +  +  K
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLIYLALSIAMRHLLLAIGRK 215



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G   T  L          +G    A R      ++ +  +YVE+ 
Sbjct: 5   LNFPALWPYWPELLSGLWVTIQLTVLATTGGVALGIAGAALRSGKPSWMSRLWGIYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPALGLKLTAGEAALLAMLIN 100


>gi|156741440|ref|YP_001431569.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
 gi|156232768|gb|ABU57551.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
          Length = 403

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 19/224 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                LT+       V SF LG++L+L      R         L ++YI         ++
Sbjct: 196 WGGLLLTLLLTVVGIVLSFPLGVLLAL-----GRQSKLPVIHWLCVIYIELIRGVPFISV 250

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A           L    F+ G T+    +     +  ++AA++AE VR GL ++PRG
Sbjct: 251 LFMA----------QLMLPLFLPGVTID-RVVRAMAGVIIFSAAYLAENVRGGLQSIPRG 299

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALGL+  K T L++LPQA+R++IP L  Q++ L K++SL V VG  DL+ +  T
Sbjct: 300 QYEAARALGLSAWKMTLLIILPQALRAVIPILVGQFIALFKDTSLVVIVGLLDLMGIART 359

Query: 356 IINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++ Q    G   E+     F+Y     +++ F  RL A++    
Sbjct: 360 VLAQPDFLGLQAEVYTFVAFVYGVFCYLMSAFSQRLEAQLHTGR 403


>gi|326329396|ref|ZP_08195720.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
 gi|325952722|gb|EGD44738.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Nocardioidaceae bacterium Broad-1]
          Length = 284

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 104/252 (41%), Gaps = 19/252 (7%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS------FVLGIVLSLFAT 205
            L V+  P    V  + +  ++   SF  +       I +F        VLG ++++   
Sbjct: 44  GLLVVSSPGWDRVRDYFLSWSHARDSFAAIGEGFWINIRIFLVAEPCVLVLGALVAVA-- 101

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R +        + L   Y   F       +V+I          P LG          S  
Sbjct: 102 RQTTSPWLAPLRLLATGYTDLFRGVPSIMVVVI-----CGIGIPALGL-----SGVTSSL 151

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F     AL     A++AE+ R+G++A+   Q+ +A AL LT  +  R V+LPQA+R ++P
Sbjct: 152 FWLTTFALVLCYGAYVAEVFRAGILAIHPTQVASAEALALTRAQTMRFVVLPQAVRRVVP 211

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL +  ++L K+++L  AVG  + +                +L+    +L +++ +    
Sbjct: 212 PLMNDLVSLQKDTALISAVGVFEALRAAQDYQGYNFNGTP-LLVAAAYFLVVAVPLTRLT 270

Query: 386 NRLNAKIALKEK 397
           + L  +   KE+
Sbjct: 271 DWLMRRQIEKEQ 282


>gi|222109052|ref|YP_002551318.1| nopaline ABC transporter [Agrobacterium radiobacter K84]
 gi|221727974|gb|ACM31024.1| nopaline ABC transporter [Agrobacterium radiobacter K84]
          Length = 236

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 9/227 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                  +  +    +T+   A  ++F  + G + +  A +LSR +  +      L  + 
Sbjct: 8   WGDAGWGDELVRGAMMTVVVAACSYLFGIIFGSIFA--AAKLSRFWSLRL-----LGDVY 60

Query: 226 TFLIFGLPTLVLIALKYQLH--FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           T ++ G+P L++I L +       + +        G      F+   + +S    A+  E
Sbjct: 61  TTVVRGVPELLIIFLVFFGGGTLLRTIANGLFGYEGYIEPQIFVIGVLCISVSAGAYATE 120

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R+ ++AVP GQ+EAA ++G+      R VL+PQA R  +P L + +   LK++SL   
Sbjct: 121 VIRAAVLAVPPGQIEAAKSIGMGPWLRLRRVLIPQAARFALPGLGNVWQFTLKDTSLISV 180

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           VG  +++         T Q     +    I+L LS +      +   
Sbjct: 181 VGLVEIMRTAAMGAGSTKQPFTFYITAFVIFLVLSSVSNRGFLKAEK 227



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 1/140 (0%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   ++ G + T  +A    +   I G++  A +LS    +  +  VY  V R +P L++
Sbjct: 13  WGDELVRGAMMTVVVAACSYLFGIIFGSIFAAAKLSRFWSLRLLGDVYTTVVRGVPELLI 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           IF ++    ++L    + +    G ++  +      L +  +A  +    +   VL++  
Sbjct: 73  IFLVFFGGGTLLRTIANGLFGYEG-YIEPQIFVIGVLCISVSAGAYATEVIRAAVLAVPP 131

Query: 205 TRLSRHFHEKTGKALPLLYI 224
            ++        G  L L  +
Sbjct: 132 GQIEAAKSIGMGPWLRLRRV 151


>gi|27379575|ref|NP_771104.1| ABC transporter permease ATP-binding protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27352727|dbj|BAC49729.1| blr4464 [Bradyrhizobium japonicum USDA 110]
          Length = 540

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 6/173 (3%)

Query: 232 LPTLVLIALKYQLHF-DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIV 285
              L  IA  Y + F   P++ Q  F   +           ++  +AL+C  A FIAE++
Sbjct: 46  FWLLAAIARAYTVIFRGTPLILQMVFAYDALPHIGIKLPAVLAAGLALACNEAPFIAEML 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G++ V RGQ+ A  ALG+T R     V+ PQA+R++IP   ++ ++ LKNSSLA  V 
Sbjct: 106 RAGVLGVDRGQVTAGQALGMTPRILMWRVIAPQAIRTMIPAFGNEAVSALKNSSLASVVA 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +L      + + T     I      +YL L+  I++    +   + L   K
Sbjct: 166 VQELTLRSTQLASSTFDFFSIFFASGLLYLVLTATISVIQLFVEWLLDLDRAK 218



 Score = 40.3 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 46/131 (35%), Gaps = 3/131 (2%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  +   G+    I+G ++   +LS   L+A I R Y  +FR  P ++ + F
Sbjct: 12  YLLEGIELTLEVTALGLGGGLILGLILAGMQLSRFWLLAAIARAYTVIFRGTPLILQMVF 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM---DTNAKIFVFSFVLGIVLSLFA 204
            Y ++  +       +     +  N        L       +         LG+   +  
Sbjct: 72  AYDALPHIGIKLPAVLAAGLALACNEAPFIAEMLRAGVLGVDRGQVTAGQALGMTPRILM 131

Query: 205 TRLSRHFHEKT 215
            R+      +T
Sbjct: 132 WRVIAPQAIRT 142


>gi|328544437|ref|YP_004304546.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
 gi|326414179|gb|ADZ71242.1| ABC transporter, permease protein, putative [Polymorphum gilvum
           SL003B-26A1]
          Length = 237

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +   G+V+      L++   E + +    +Y + F       L L  + Y +
Sbjct: 25  VTVGLALATLPFGLVIGFLL-ALAKKADEPSLRMAANIYTTLFRGL-PELLTLFLVYYGV 82

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                   +            F++  +AL+   +++ +E   S    +P+GQ E   ALG
Sbjct: 83  QILLQQAARAAGFNAFIEVNSFVAGMVALALVFSSYASEAFLSAFRGIPQGQYEGGYALG 142

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +   L++LPQ +R  +P L + +L LLK ++L   +G +DL+   G     T +  
Sbjct: 143 LTRLRTLHLIILPQLVRLALPALGNLWLILLKETALVSVIGLSDLIRQSGIAARVTKEPF 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               +   IYL L+++ +  + R+ A     E +
Sbjct: 203 LFFGVACLIYLLLAVISSFGIVRIEAWSKRGEAR 236



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 63/191 (32%), Gaps = 21/191 (10%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G + T  LA + +    +IG L+   + +    +     +Y  +FR +P L+ 
Sbjct: 15  WGDEIAYGVLVTVGLALATLPFGLVIGFLLALAKKADEPSLRMAANIYTTLFRGLPELLT 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLF 203
           +F +Y  V                       L         NA I V SFV G+V L+L 
Sbjct: 75  LFLVYYGV--------------------QILLQQAARAAGFNAFIEVNSFVAGMVALALV 114

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
            +  +        + +P          GL  L  + L       +  L     +    + 
Sbjct: 115 FSSYASEAFLSAFRGIPQGQYEGGYALGLTRLRTLHLIILPQLVRLALPALGNLWLILLK 174

Query: 264 PEFMSLYIALS 274
              +   I LS
Sbjct: 175 ETALVSVIGLS 185


>gi|87124566|ref|ZP_01080415.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Synechococcus sp. RS9917]
 gi|86168138|gb|EAQ69396.1| Amino acid ABC transporter, permease protein, 3-TM
           region,His/Glu/Gln/Arg/opine [Synechococcus sp. RS9917]
          Length = 345

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +++R      LT+       + +  LG++L+L      R       +    LY+      
Sbjct: 127 VSSRTWGGLVLTLLLTGASGLLALPLGVMLAL-----GRSSDLPVLRHGSRLYVDLMRAV 181

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L   VL   +  +    PV  + N +         +   +A + + +A++AE VR GL 
Sbjct: 182 PLIA-VLFFGQLLIPLFLPVQLELNRV---------LRAVLAFALFASAYVAEDVRGGLQ 231

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P  Q EAA ALGL+  ++ +LV+LPQA++  IP LT+Q + LL+N+SL   +G  +L+
Sbjct: 232 SIPSTQKEAAAALGLSAWQSLQLVVLPQALQIAIPALTNQAIGLLQNTSLMALLGLVELL 291

Query: 351 SVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +  +++      G+ +E+ +    +Y  L   +AL   RL  
Sbjct: 292 GISRSLLANPAFIGRHLEVYVWLASLYWLLCTAMALLARRLER 334



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 5/183 (2%)

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + A  +G ++  GR S   ++    R+YV++ R +P + V+FF    +   LP+      
Sbjct: 147 LLALPLGVMLALGRSSDLPVLRHGSRLYVDLMRAVPLIAVLFFGQLLIPLFLPVQLELNR 206

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL----- 219
           +   +       S             + S       +L  +           +AL     
Sbjct: 207 VLRAVLAFALFASAYVAEDVRGGLQSIPSTQKEAAAALGLSAWQSLQLVVLPQALQIAIP 266

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L   +  L+     + L+ L   L   + +L    FIG       +++    L C   A
Sbjct: 267 ALTNQAIGLLQNTSLMALLGLVELLGISRSLLANPAFIGRHLEVYVWLASLYWLLCTAMA 326

Query: 280 FIA 282
            +A
Sbjct: 327 LLA 329


>gi|107028496|ref|YP_625591.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686492|ref|YP_839739.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105897660|gb|ABF80618.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652207|gb|ABK12846.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 240

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 100/236 (42%), Gaps = 11/236 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS----------RHFHEKTGKALPLL 222
              L       +    + + + ++ + L+L A  +           +    +T + L  L
Sbjct: 1   MAILEMLGFGTEGWGGVLLLAALMTVALTLAALAVGAMIGAAIAAAKLSRYRTLRLLGDL 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y + F       LV+    +        +GQ+    G    P F+   +A+   + A+ A
Sbjct: 61  YTTVFR-GVPELLVIYLFYFGGSTLVTAVGQWFGAEGFIGVPPFVIGALAVGMISGAYQA 119

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+ ++AV +G++EAA ++G+      R +L+PQ +R  +P + + +   LK+S+L  
Sbjct: 120 EVYRAAVLAVSKGELEAARSIGMPRSMVLRRILVPQVLRFALPGIGNVWQLSLKDSALIS 179

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G A+L+       N T Q     +    +YL ++ +     NR  A +    ++
Sbjct: 180 VTGLAELLRTSQIAANSTHQYFVFFVAGGALYLLMTGLSNRVFNRAEAIVGRSFRR 235


>gi|171318276|ref|ZP_02907437.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171096540|gb|EDT41436.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 240

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 1/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + +    +   A   ++    ++ + L  LY + F       LV+    +  
Sbjct: 23  LMTVALTLAALAVGAVIGAAIAAAKLSRHRSARLLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G
Sbjct: 82  STLVTTIGQWFGAEGFIGVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+       + T Q  
Sbjct: 142 MPRGMVLRRILVPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +     NR  A +    ++
Sbjct: 202 VFFVAGGTLYLVMTGLSNRVFNRAEAIVGRSFRR 235


>gi|330872635|gb|EGH06784.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 179

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 2/162 (1%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
           A RL +    K  + L   Y  + L+ G+P L+ + L Y    +        F       
Sbjct: 9   ARRLGQDLAYKPLQWLGSTY--STLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLAL 66

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F +  IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  
Sbjct: 67  SAFSAGVIALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIA 126

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +P L + ++ L+K+++L   +G  +++      +  T QA  
Sbjct: 127 LPGLGNLFMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFT 168


>gi|309777758|ref|ZP_07672707.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914524|gb|EFP60315.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 256

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 105/244 (43%), Gaps = 23/244 (9%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-------- 209
            PD      + +F +N  L +  + +     +      L I L L   R  R        
Sbjct: 7   KPDGMFAQAWWIFQDNIPLFWYGIKITLLLAVCGTLIGLVIGLLLGGIRAVRIEERDSAV 66

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
               ++       LY+  F   G P +V   + Y  H  +P+L                +
Sbjct: 67  SRIIKRILHGFVGLYVWIF--RGTPMMVQALIIY--HGLRPILN----------WSPVTA 112

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
               +S  T A++AEI+R+G+ ++ +GQ EAA +LG+T  +    ++LPQA+R+  P + 
Sbjct: 113 GITIISINTGAYMAEIIRAGIQSIDKGQNEAARSLGMTSTQTMMSIILPQAIRNSFPSIG 172

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++  +K+SS+   +G  +L     ++       +   ++   +YL L+ +    ++ +
Sbjct: 173 NEFIVNIKDSSMLNVIGVIELYFQSSSVAGSLMLYVPTFIVAAILYLLLTTLATQLLSFV 232

Query: 389 NAKI 392
             ++
Sbjct: 233 EGRM 236


>gi|288934310|ref|YP_003438369.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288889039|gb|ADC57357.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 250

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 6/229 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI--STFLIF 230
              L+F              + V+ ++  LF+T L         + +P +      FL F
Sbjct: 1   MFSLAFIRDNFTFILSALPVTLVITLLSLLFSTLLGAALAWVIIRQVPGVQWGAKVFLSF 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAFIAEIVR 286
                VL+ L +  +    +           +        ++   ALS   +A+ AE  R
Sbjct: 61  SRSVPVLVMLYFFFYVWPWIAAGLFGGPQDNMYHYKLSPLVAAVTALSLIFSAYFAETFR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G  AV +GQ EAA ++GL+     R ++ PQA  S +P  TS  ++L+K++SL   +  
Sbjct: 121 AGWNAVDKGQREAAWSIGLSGFTQFRRIIFPQAAVSALPNFTSVLIDLIKDTSLVYTITV 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            DL++       +    +E   + + IY++L + IA  +  +   +  +
Sbjct: 181 IDLMAKANIAAARGFHFVEAYCVVLVIYIALCLAIARALRSVERFLRAR 229


>gi|170701276|ref|ZP_02892242.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|172064906|ref|YP_001815618.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|170133799|gb|EDT02161.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|171997148|gb|ACB68065.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 240

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 1/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + +    +   A   ++    ++ + L  LY + F       LV+    +  
Sbjct: 23  LMTVALTLAALAVGAVIGAAIAAAKLSRHRSARLLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G
Sbjct: 82  STLVTTVGQWFGAEGFIGVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+       + T Q  
Sbjct: 142 MPRAMVLRRILVPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAASSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +     NR  A +    ++
Sbjct: 202 VFFVAGGALYLVMTGLSNRVFNRAEAIVGRSFRR 235


>gi|70730424|ref|YP_260165.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68344723|gb|AAY92329.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 236

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 4/207 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S  +G VLSL    L R  H    +    L+  T++  G P  + + + Y  
Sbjct: 25  MTLWLLVASLAMGFVLSLPLAIL-RTSHWALLRWPVQLF--TYVFRGTPLYIQLLICYSG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    + Q   +  +          +A +  T A+  EI    + ++P G++EAA A G
Sbjct: 82  LYGIAAIRQQPLLE-AFFRDAMNCTLLAFTLNTCAYTVEIFAGAIRSIPYGEIEAAHAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +    ++LP A+R  +P  +++ + +L  +S+A      D++ V       T    
Sbjct: 141 LSGWRLYWRLILPSALRRALPYYSNEVILMLHATSVAFTATIPDILKVARDANAATFMTF 200

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +   I   +YL LS  +         +
Sbjct: 201 QAFGIAGLLYLGLSFGLVAAFRLAERR 227



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 36/106 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    ++   +   R S   L+ W  +++  VFR  P  + +   Y
Sbjct: 20  LTGLAMTLWLLVASLAMGFVLSLPLAILRTSHWALLRWPVQLFTYVFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             +  +  I    ++  F     N  L   TL             +
Sbjct: 80  SGLYGIAAIRQQPLLEAFFRDAMNCTLLAFTLNTCAYTVEIFAGAI 125


>gi|318060995|ref|ZP_07979716.1| glutamate transporter permease [Streptomyces sp. SA3_actG]
 gi|318077285|ref|ZP_07984617.1| glutamate transporter permease [Streptomyces sp. SA3_actF]
          Length = 238

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 110/247 (44%), Gaps = 21/247 (8%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSR 209
                 +  + F        L    +T+   A   V S + G VL+          R   
Sbjct: 7   PIPRVEAREIVFDFLDGYDLLGAFWVTVKLTALSAVGSLIWGTVLAAMRVGPVPLMRGFA 66

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             +    + +PL  I  F   GL   + IAL                  G   +  F   
Sbjct: 67  TGYINIVRNIPLTVIIVFASLGLFQTLGIALG---------------AEGDFKAINFRLA 111

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L  YT++F+ E VRSG+  VP GQ EAA ALGL+ R+   L++LPQA RS++ PL +
Sbjct: 112 VLGLILYTSSFVCEAVRSGINTVPMGQAEAARALGLSFRQVLALIILPQAFRSVVNPLAN 171

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             + L KN+++A A+G  +   +   +I    + + I L++ F ++ L++   L +  ++
Sbjct: 172 VLIALTKNTTIAAAIGVGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVS 231

Query: 390 AKIALKE 396
            K+A+K 
Sbjct: 232 KKVAIKR 238



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     + + I GT++ A R+    L+      Y+ + RNIP  V+I F 
Sbjct: 26  LLGAFWVTVKLTALSAVGSLIWGTVLAAMRVGPVPLMRGFATGYINIVRNIPLTVIIVFA 85

Query: 149 YKSVLSV 155
              +   
Sbjct: 86  SLGLFQT 92


>gi|317047032|ref|YP_004114680.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316948649|gb|ADU68124.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 222

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + V G+ L +    L        G+   +  I   LI   
Sbjct: 11  WPHWPELLAGLWITIQLTVLATVGGVALGILGAALRTGKPSLAGR---IWGIYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPNLGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT  +    V+LP +++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLTRSQTFLRVVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I ++T  + E+ L+   IYL+LSI +   +  +  K
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLIYLALSIAMRQLLLAVGRK 215



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 37/96 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   +   +L G   T  L     +    +G L  A R     L   I  +YVE+ 
Sbjct: 5   LNFAALWPHWPELLAGLWITIQLTVLATVGGVALGILGAALRTGKPSLAGRIWGIYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLIN 100


>gi|227549083|ref|ZP_03979132.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078865|gb|EEI16828.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 228

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 3/226 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L        T  K+ V+S +  ++L    T + R       + L   YI+T     
Sbjct: 5   WADLLPDLWPAFWTTIKLTVYSAIGAMILGTLLTAM-RVSPVGILRGLSGFYINTVRNTP 63

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L TLV++   + L+ +  +               F    +    YT+ F+AE +RSG+  
Sbjct: 64  L-TLVILFCSFGLYQNLGLQLASRESSTFIADQNFRLAVLGFILYTSCFVAESLRSGINT 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA +LGL   +   L++LPQA+R+ I PL +  + L KN+++A  +G A+   
Sbjct: 123 VHVGQSEAARSLGLGFGQIFSLIILPQALRAAIIPLGNTLIALTKNTTIASVIGVAEASL 182

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  + I     +   I  ++   ++ L++ + L +  L+ ++A+K 
Sbjct: 183 LMKSTIEMHANELFVIFGVFALGFIILTLPMGLALGWLSERLAVKR 228



 Score = 43.8 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +   F  T  L     I A I+GTL+ A R+S   ++  +   Y+   RN P  +VI F 
Sbjct: 12  LWPAFWTTIKLTVYSAIGAMILGTLLTAMRVSPVGILRGLSGFYINTVRNTPLTLVILFC 71

Query: 149 YKSVLSV 155
              +   
Sbjct: 72  SFGLYQN 78


>gi|119898555|ref|YP_933768.1| amino acid ABC transporter permease [Azoarcus sp. BH72]
 gi|119670968|emb|CAL94881.1| amino acid ABC transporter, permease protein [Azoarcus sp. BH72]
          Length = 222

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +     V GI L +    + R +       +  +Y+   +I   P LV +   +    
Sbjct: 25  LALTAVGAVFGIGLGILG-AICRAWKLAPFDRIFGVYVE--VIRNTPFLVQLFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          E+ +  +A+     A+  EI+R+G+ A PRGQ+EAA +L LT
Sbjct: 78  -------FGLPSLGVKMTEWQAAVLAMVINLGAYSTEIIRAGIQATPRGQIEAAESLALT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+L  A+  + P LTSQ + ++  S++   +   +L      I ++  +A E 
Sbjct: 131 RSQIFRHVVLRPALAKVWPALTSQVIIVMLGSAVCSQIATEELTFAANFIQSRNFRAFET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   IY +++++I   + ++  +  +   +
Sbjct: 191 YFVTTAIYFAMALLIRQLLIQIGQRYVVGRAR 222



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 38/111 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +      A  +L G   T  L   G +    +G L    R         I  VYVEV R
Sbjct: 6   DFAPVFDNADLLLSGAGFTLALTAVGAVFGIGLGILGAICRAWKLAPFDRIFGVYVEVIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVKMTEWQAAVLAMVINLGAYSTEIIRAGIQAT 116


>gi|159904018|ref|YP_001551362.1| ABC-type amino acid transport system, permease component
           [Prochlorococcus marinus str. MIT 9211]
 gi|159889194|gb|ABX09408.1| ABC-type amino acid transport system, permease component
           [Prochlorococcus marinus str. MIT 9211]
          Length = 339

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 18/277 (6%)

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            L + +    V + R   P V        + +V             + +++R     TLT
Sbjct: 75  WLFSLLALTTVTLLRPGLPWVRKLIPIAWISAVPVGIYLLSGGLGLLPISSRYWGGLTLT 134

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +   A   + +F LG++ ++   R S HF  K        Y+S   I  L  + LIA+ +
Sbjct: 135 LFLMASSALIAFPLGMIFAI--GRQSEHFLIK--------YLSAIYIDTLRAIPLIAILF 184

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P+   F            +   IA + + +A++AE +R GL A+P  Q+EAA A
Sbjct: 185 FGQLLIPLFLPFGL-----EINRVLRAVIAFALFVSAYVAEDIRGGLQAIPTSQIEAAKA 239

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--- 359
           LGLT  +  + ++LPQA+   IP L +Q + LL+N+SL   +G  +L+ +  +I+     
Sbjct: 240 LGLTDFQIKQFIVLPQAITIAIPALANQAIGLLQNTSLMAILGLVELLGISRSILANPEF 299

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            G+ +E+ +    IY  +  +IA+    +  ++ + +
Sbjct: 300 IGRYVEVYVWLALIYWLVCTVIAILSRHIEQRMKIGK 336



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 5/199 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G   T +L  S  + A  +G +   GR S + L+ ++  +Y++  R IP + ++FF 
Sbjct: 127 YWGGLTLTLFLMASSALIAFPLGMIFAIGRQSEHFLIKYLSAIYIDTLRAIPLIAILFFG 186

Query: 149 YKSVLSVLPIPDHSI-----VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
              +   LP           V+ F +F++          +       + +     +    
Sbjct: 187 QLLIPLFLPFGLEINRVLRAVIAFALFVSAYVAEDIRGGLQAIPTSQIEAAKALGLTDFQ 246

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             +        T     L   +  L+     + ++ L   L   + +L    FIG     
Sbjct: 247 IKQFIVLPQAITIAIPALANQAIGLLQNTSLMAILGLVELLGISRSILANPEFIGRYVEV 306

Query: 264 PEFMSLYIALSCYTAAFIA 282
             +++L   L C   A ++
Sbjct: 307 YVWLALIYWLVCTVIAILS 325


>gi|13488462|ref|NP_109469.1| ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14028216|dbj|BAB54808.1| ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 219

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 100/234 (42%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +      +      +       V S +    L      + R      G   P L +
Sbjct: 1   MGFNLDFALSTIPTIVGAIGATLLATVLSCLGASALGFSLEMIRR------GGGAPGLAV 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              + F   T VL A  Y L+F  P                     + LS Y + ++AE+
Sbjct: 55  RFLIDFIRSTPVL-AWLYFLYFVMPFY--------GIRLGAMTVGVMGLSLYYSGYLAEV 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            ++G+ A+P+GQ EAA AL L+ R     V+ PQ +R++  PL +  +++LK +     +
Sbjct: 106 FKAGIDAIPKGQQEAARALSLSRRDTVVFVIAPQMLRNVAAPLGNYVVSILKATPYLAIL 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++     I ++T +  E + +   ++L+L++++A  + R+  ++    ++
Sbjct: 166 AVPEMLGRAFDIASETYRYAEPLTVAGILFLALALIVAYGVKRIEQRLLASGRR 219


>gi|330890819|gb|EGH23480.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 220

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 14/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    +   G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWTAREVLWSGFLTSIQCSALAIAAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL            +               F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVLAVFYMVPALGWQI-------------SAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+P GQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +G A+L+     +I +T   +E  L   F++  ++  I +   ++  ++AL
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIEILGRQIEKRVAL 219


>gi|300718064|ref|YP_003742867.1| octopine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299063900|emb|CAX61020.1| octopine ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 239

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 90/227 (39%), Gaps = 4/227 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
                F  +               + + +F+LG V+       ++    +  + L   Y 
Sbjct: 5   WQLLSFGPDGWGPVLLKAAGVTVSVSLCAFLLGSVIGSLV-AWAKIGGNRWMRRLAEGY- 62

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAE 283
            T ++ G+P L++I + Y               + G      F++  +A+   + A  AE
Sbjct: 63  -TVVLRGIPDLIVIYIFYFGGRQVLAFFGHALGMQGPFDISGFVAGALAIGLISGAGQAE 121

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R    ++P+G +EAA  +G+      R V++PQA+ + IP L +Q+ + +K S+L   
Sbjct: 122 VFRGSYHSIPKGTLEAATVVGMGKWLMFRRVIVPQALTTAIPGLGNQWQSAIKESALVSV 181

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            G  + ++        T        +   IYL ++ +    + +   
Sbjct: 182 TGLVETMNQVQVASGSTQMPFFFFAVGAVIYLLITTVSEFVIRQAEK 228


>gi|167569999|ref|ZP_02362873.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia oklahomensis C6786]
          Length = 247

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 8/167 (4%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 63  IVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA++ + P   +Q+++L+K++SLA  VG
Sbjct: 116 HAGIRAAGAGQWQAGLSLGLTRWQTVRYVLLPQAVKIMTPSFVNQWVSLVKDTSLAYIVG 175

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L  V   + N+      ++ L    IYL L   + +    L A+
Sbjct: 176 VPELSFVATQVNNRLMVYPAQVFLFVGVIYLILCTALDVAATWLLAR 222


>gi|221197498|ref|ZP_03570545.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221204171|ref|ZP_03577189.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221176337|gb|EEE08766.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221184052|gb|EEE16452.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 223

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 17/233 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            ++     F        L    +T+           VLG VL LFA             A
Sbjct: 1   MNYHFDFSFLGGSVGALLDGLKVTVVLAVAANAMGLVLGFVLCLFAMSR---------WA 51

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L       F+ F   T  L+ + +  +    ++  F                +AL     
Sbjct: 52  LVRWPAQLFIEFFRCTPALLQIIWFFYCIPMMVDVF--------IDPITMGVLALGLNLT 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF AE  R+G+ AVP+  ++AA+ALGL   + T  V+LPQA+R+ +P L +  +  L+ S
Sbjct: 104 AFNAEAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRNAMPVLLTNGIGSLQQS 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   V  ADL+ V  ++  Q  + +E   +   +Y +LS+ IA  ++ +  +
Sbjct: 164 ALVAIVAVADLMYVAKSLATQAYRPLETYSVVALVYFALSLPIARLVHVIERR 216



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA +      ++G ++    +S   LV W  ++++E FR  P L+ I +
Sbjct: 16  ALLDGLKVTVVLAVAANAMGLVLGFVLCLFAMSRWALVRWPAQLFIEFFRCTPALLQIIW 75

Query: 148 LYKSVLSV 155
            +  +  +
Sbjct: 76  FFYCIPMM 83


>gi|255524919|ref|ZP_05391867.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
 gi|255511397|gb|EET87689.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium carboxidivorans P7]
          Length = 232

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 102/248 (41%), Gaps = 17/248 (6%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             +   V S +   D  + L F   L    L    +T++ +     F F++G +      
Sbjct: 1   MIITTIVASFVLGRDDIMDLSFLKVLMPMLLDGLKITLEVSMFGIFFGFLIGCLSGFALQ 60

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
                   K  K +  +Y   ++I G P +V       ++F  P +   +          
Sbjct: 61  -----CKNKITKVIANIY--LWIIRGTPLIVQAL---YVYFVIPKITGHDIQSN------ 104

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +  I +S  + AFIAEIVR  L  +  GQ EA ++LGLT  +    V++P A +S++P
Sbjct: 105 -AAGIIVISLNSGAFIAEIVRGSLEGIDLGQKEAGVSLGLTPFQTLWHVVIPPAFKSMLP 163

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +Q++  +K++++   +   ++          T   I+        YL +  ++ +  
Sbjct: 164 ALFNQFIITVKDTAILSVIVVNEITKQIQNYAAVTFDTIQAYSAGAVFYLVIISILIIIQ 223

Query: 386 NRLNAKIA 393
            ++  ++ 
Sbjct: 224 KQIERRVK 231



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 30/70 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++  G+    +IG L G      NK+   I  +Y+ + R  P +V   ++
Sbjct: 30  LLDGLKITLEVSMFGIFFGFLIGCLSGFALQCKNKITKVIANIYLWIIRGTPLIVQALYV 89

Query: 149 YKSVLSVLPI 158
           Y  +  +   
Sbjct: 90  YFVIPKITGH 99


>gi|254518097|ref|ZP_05130153.1| polar amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
 gi|226911846|gb|EEH97047.1| polar amino acid ABC transporter [Clostridium sp. 7_2_43FAA]
          Length = 221

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 13/190 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           ++R+F+ K    +   YI        P L+ +   Y                       F
Sbjct: 42  VARYFNIKWVNVISKGYIEF--SRNTPLLIQVFFLYY-----------GLTKLGVKLSGF 88

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
               I LS    A++AE  R G+ AV + Q+E+  ALGL+  +  R +++P +    IP 
Sbjct: 89  ACGVIGLSFLGGAYMAESFRGGIDAVAKSQIESGQALGLSKTQILRYIVMPMSFSISIPS 148

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           + +  + L+K +S+  ++  A+L+ V   +I    +  E +++ +  YL + + I++   
Sbjct: 149 IVANCIFLVKETSIIGSIAVAELMFVTKDVIGMYYKTNEALILVVVFYLMILLPISIISR 208

Query: 387 RLNAKIALKE 396
            L  ++   E
Sbjct: 209 ILERRLRHGE 218



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                  T  LA   +I + +IG ++   R    K V  I + Y+E  RN P L+ +FFL
Sbjct: 15  FFQATAITIKLAIISIILSILIGVIIEVARYFNIKWVNVISKGYIEFSRNTPLLIQVFFL 74

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 75  YYGLTKL 81


>gi|222081929|ref|YP_002541294.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726608|gb|ACM29697.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 227

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 14/236 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F             L +    ++ V S V+G+VL      + R       + +   
Sbjct: 1   MSYQFDFASLLPYWKEFALGVWLTLQLSVISTVIGLVLGTL-CAIGRADGGPWLRGIIAT 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   +I   P LV + L Y           F            M+  +AL     A+  
Sbjct: 60  YVE--VIRNTPLLVQVFLVY-----------FGIATLGVHVSANMAAVVALVVNVGAYTC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL ++ + Q+EAA  LGL+ R+    V++  A+  + P LTSQY+ L+  SS+  
Sbjct: 107 EIVRAGLQSIHKAQLEAAECLGLSRRQTYWHVIIRPAIERVYPALTSQYVLLMLASSITS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +   +L +V   I + T ++ E  ++   +YL LS ++ + +  L   + ++ +K
Sbjct: 167 QISAEELTAVANRIQSDTFRSFETYIVVGVLYLLLSFVVRIALWLLGLGLFVRRRK 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 34/81 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S   Y     +G   T  L+    +   ++GTL   GR      +  I   YVEV R
Sbjct: 6   DFASLLPYWKEFALGVWLTLQLSVISTVIGLVLGTLCAIGRADGGPWLRGIIATYVEVIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           N P LV +F +Y  + ++   
Sbjct: 66  NTPLLVQVFLVYFGIATLGVH 86


>gi|149203335|ref|ZP_01880305.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. TM1035]
 gi|149143168|gb|EDM31207.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. TM1035]
          Length = 429

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 101/228 (44%), Gaps = 19/228 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R +    + +         S  LGI+L+L      R       K + +++I       L 
Sbjct: 217 RDMGGFMINLMLGVVCVSLSLPLGILLAL-----GRQSSMPIIKWICVVFIEFIRGVPLI 271

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           T     + + I ++ +++A+IAE++R GL A+P
Sbjct: 272 TLLFVANVVLAYFLPP----------GTNFDLILRVIIMITMFSSAYIAEVIRGGLAALP 321

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA +LGL + +A +L++LPQA++  IP + +  + L K+++L   +   D+V + 
Sbjct: 322 RGQYEAADSLGLDYAQAMQLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDIVGMI 381

Query: 354 G----TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                      G   E+      ++      I+ +   L  ++    +
Sbjct: 382 RGPILASAEWNGVYWELFGFACVLFFITCYGISQYSQWLERQLRTDHR 429


>gi|302337320|ref|YP_003802526.1| polar amino acid ABC transporter inner membrane protein
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634505|gb|ADK79932.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 220

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 18/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T   +     FS +LGI+  +       +      + +  +Y+  F        
Sbjct: 17  LHGFPNTFLLSVVPLFFSLILGIIGGVLG-----NSKISVLRVIAKIYVYLFRNIPF--- 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             +   Y  ++  P L            P   +  +AL+    +++ EI+R GL  + R 
Sbjct: 69  --LIFVYVAYYGFPYL--------GVNIPPLTTAVVALAINHGSYMTEIMRGGLNTIRRE 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EA+ ++GL   +   LV++PQ +  + P +  Q + L+K++S+   +G ++L  +G  
Sbjct: 119 QIEASASIGLNIFQQYSLVIIPQTIMEVAPSIVGQTILLVKDTSIISVIGISELTRIGRQ 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I   T     +       Y  L  +  +  N   AK+ 
Sbjct: 179 ITMLTNSPFLVFFYVAVFYYVLCFLFQMLSNWSEAKVK 216



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 42/98 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF NTF L+   +  + I+G + G    S   ++  I ++YV +FRNIP L+ ++  
Sbjct: 16  LLHGFPNTFLLSVVPLFFSLILGIIGGVLGNSKISVLRVIAKIYVYLFRNIPFLIFVYVA 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
           Y     +             + +N+       +    N
Sbjct: 76  YYGFPYLGVNIPPLTTAVVALAINHGSYMTEIMRGGLN 113


>gi|23465687|ref|NP_696290.1| amino acid ABC transporter permease [Bifidobacterium longum
           NCC2705]
 gi|23326365|gb|AAN24926.1| probable permease protein for ABC transporter system for
           amino-acids [Bifidobacterium longum NCC2705]
          Length = 320

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 14/242 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
              + +      + +      L    L +       V   +L  +++L   R SR     
Sbjct: 87  WPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALV--RTSRSPILF 144

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + L L+Y  T ++ G+P +V++   Y + F  P LG F  I  S +        IA+ 
Sbjct: 145 PLRILALIY--TTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVL------GTIAVV 193

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              +A+++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++
Sbjct: 194 MGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISM 253

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            K+  L   +G  D V      +  T       ++   +++ +S+   L  +    ++  
Sbjct: 254 QKDVGLISVLGAVDAVRAAQIDVASTYN-FTPYVVASLLFILMSVPFILLNDWYTERLRK 312

Query: 395 KE 396
           +E
Sbjct: 313 RE 314


>gi|290508513|ref|ZP_06547884.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|289777907|gb|EFD85904.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 250

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 92/229 (40%), Gaps = 6/229 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+F              + V+ ++  LF+T L         + +P +     +    
Sbjct: 1   MFSLAFIRDNFTFILSALPVTLVITLLSLLFSTLLGAALAWVIIRQVPGVQWGAKVFLSF 60

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVS------PEFMSLYIALSCYTAAFIAEIVR 286
              V + +     F           GG   +         ++   ALS   +A+ AE  R
Sbjct: 61  SRSVPVLVMMYFFFYVWPWIAAGLFGGPQDNMYHYKLSPLVAAVTALSLIFSAYFAETFR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G  AV +GQ EAA ++GL+     R ++ PQA  S +P  TS  ++L+K++SL   +  
Sbjct: 121 AGWNAVDKGQREAAWSIGLSGFTQFRRIIFPQAAVSALPNFTSVLIDLIKDTSLVYTITV 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            DL++       +    +E   + + IY+ L + IA  +  +   +  +
Sbjct: 181 IDLMAKANIAAARGFHFVEAYCVVLVIYIVLCLAIARALRSVERFLRAR 229


>gi|170748629|ref|YP_001754889.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170655151|gb|ACB24206.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 245

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 14/247 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +    G  L  R L++          +   + + G  L   A  L      + G+ +  L
Sbjct: 1   MTPLVGDALAPRYLAWLLQGFGVTLALSAATCLAGTALGFAACGLLEA-GGRAGRGVVTL 59

Query: 223 YISTFLIFGLPTLVLIALKYQL-----------HFDKPVLGQFNFIGGSTVSPEFMSLYI 271
             S  ++   P LV + + Y               + P +           + E ++ + 
Sbjct: 60  --SVGIVRNTPLLVQLFIWYFAVAAALPHGVTAWLNAPHVLDLGLGALRWPAYESLAGFC 117

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ Y  A+IAE +R+G+ AV   Q EAA+ALGL   +A R ++LPQA+R    P+  QY
Sbjct: 118 GLALYAGAYIAEELRAGIGAVRSTQREAALALGLAPVQAFRHIVLPQALRVAWLPIVGQY 177

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           LN LKN+SL + +G A+L      +  +T +  +   I   +Y+  +  +      L  +
Sbjct: 178 LNTLKNTSLTMTIGLAELSYASRQVETETFETFQAFGIATLLYVGAAAAVETAGQILGRR 237

Query: 392 IALKEKK 398
                + 
Sbjct: 238 FRPPGRH 244



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L GF  T  L+ +  +  T +G        +  +    +  + V + RN P LV
Sbjct: 12  RYLAWLLQGFGVTLALSAATCLAGTALGFAACGLLEAGGRAGRGVVTLSVGIVRNTPLLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
            +F  Y +V + LP    + 
Sbjct: 72  QLFIWYFAVAAALPHGVTAW 91


>gi|153814547|ref|ZP_01967215.1| hypothetical protein RUMTOR_00761 [Ruminococcus torques ATCC 27756]
 gi|317500589|ref|ZP_07958810.1| hypothetical protein HMPREF1026_00753 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089310|ref|ZP_08338211.1| hypothetical protein HMPREF1025_01794 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848041|gb|EDK24959.1| hypothetical protein RUMTOR_00761 [Ruminococcus torques ATCC 27756]
 gi|316898022|gb|EFV20072.1| hypothetical protein HMPREF1026_00753 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330405491|gb|EGG85023.1| hypothetical protein HMPREF1025_01794 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 228

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + +  LG+V++  +    +           L  I  ++I G P ++ + + Y  
Sbjct: 25  LFFVTLLGAVPLGLVIAFGSMSRFKPLSY-------LTKIIVWIIRGTPLMIQLLIIYFF 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L   N I G   +  F++  +A     A + +EI R G+  VP GQ EA + LG
Sbjct: 78  ----PGLVMGNNIWGGGEAGRFLAAAVAFIFNYACYFSEIYRGGIQGVPHGQEEAGLVLG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---G 361
           +T  +    V L Q ++ I+PP++++ + L+K++SLA  +   +++  G   +  +    
Sbjct: 134 MTRSQIFFKVTLLQMVKRIVPPMSNEIITLVKDTSLARIIALQEIIWAGQAFLKGSQGIA 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I  +      YL  + ++ + + RL  K+
Sbjct: 194 GVIWPLFFTAVYYLIFNGILTVLLGRLEKKL 224



 Score = 37.2 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 33/60 (55%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           +GF+ T  L F  ++ A  +G ++  G +S  K ++++ ++ V + R  P ++ +  +Y 
Sbjct: 17  IGFLQTLKLFFVTLLGAVPLGLVIAFGSMSRFKPLSYLTKIIVWIIRGTPLMIQLLIIYF 76


>gi|304394879|ref|ZP_07376763.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357132|gb|EFM21495.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 241

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 6/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                LS   +T+  +   ++   +LG VL       SR         L   YI+ F   
Sbjct: 17  WGGVLLSAAAVTVSVSLCAWLLGAMLGSVLCWMQIAGSRWQQR-----LAAGYITLFR-G 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV+    +        +G      G      F++  IA+   + A+ + + R    
Sbjct: 71  VPELLVIYLFYFGGRQVVSTVGTALGFQGPFDVNGFVADAIAIGLISGAYQSGVFRGAFY 130

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P G +EAA   G+      R +++PQA+R+ +P + +Q+ +++K S+L    G  + +
Sbjct: 131 AIPGGTLEAATVTGMGRLMMFRRIIVPQALRTALPGMGNQWQSVIKESALVSVTGLVETM 190

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   T  N T  +     +   IYL ++    +    +       +++
Sbjct: 191 NQVSTAANSTQMSFFFYSVGAVIYLIITTCSDMVFRYVEKFAMRGQQR 238



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 39/91 (42%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D  +   +L     T  ++    +   ++G+++   +++ ++    +   Y+ +FR +P 
Sbjct: 14  DEGWGGVLLSAAAVTVSVSLCAWLLGAMLGSVLCWMQIAGSRWQQRLAAGYITLFRGVPE 73

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           L+VI+  Y     V+     ++       +N
Sbjct: 74  LLVIYLFYFGGRQVVSTVGTALGFQGPFDVN 104


>gi|169630136|ref|YP_001703785.1| putative glutamate ABC transporter, permease [Mycobacterium
           abscessus ATCC 19977]
 gi|169242103|emb|CAM63131.1| Putative glutamate ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 286

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 15/283 (5%)

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
               +       + R+   VF  +  +V  + ++  V +     +               
Sbjct: 6   VMYDAPGPKGRALNRIIAVVFTALVGVVAAWVIWTLVANEQLTTEKWSPFLRLNTWTTYI 65

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   VF+  LG VL +      R    +  + +    +  F    +P L
Sbjct: 66  LPGLLGTVTAAALSIVFALALGAVLGI-----GRLSEHRAVRWICSALVEFF--RAIPVL 118

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L+   Y L+  + V          +    F ++   LS Y  + IAEI+RSG+ ++P+G
Sbjct: 119 ILMVFSYYLYGQQAVFP--------SEYLAFAAVVTGLSLYNGSVIAEILRSGIQSLPKG 170

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA+ALG+   +  RL+LLPQ++ +++P L SQ +  LK+S+L  A G+ ++V  G  
Sbjct: 171 QSEAAVALGMRKSQMMRLILLPQSISAMLPALISQMVIALKDSALGYAFGYIEVVRSGIR 230

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  G  +  +++   I + ++  ++    R+  ++     K
Sbjct: 231 SASYYGNYLPALVVVAVIMIIINFALSSLATRIERQLRQGRTK 273



 Score = 73.8 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 17/139 (12%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R  N  + ++   L+ V+  W +  +  N + +                  +   P+   
Sbjct: 16  RALNRIIAVVFTALVGVVAAWVIWTLVANEQLT-----------------TEKWSPFLRL 58

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           +++ T IL G + T   A   ++ A  +G ++G GRLS ++ V WIC   VE FR IP L
Sbjct: 59  NTWTTYILPGLLGTVTAAALSIVFALALGAVLGIGRLSEHRAVRWICSALVEFFRAIPVL 118

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           +++ F Y         P  
Sbjct: 119 ILMVFSYYLYGQQAVFPSE 137


>gi|157693108|ref|YP_001487570.1| amino acid ABC transporter ATP-binding protein [Bacillus pumilus
           SAFR-032]
 gi|157681866|gb|ABV63010.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bacillus pumilus SAFR-032]
          Length = 232

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 9/230 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F               +     I + S    I++ L      R       K L  +Y+
Sbjct: 1   MTFTARDWLGIFLQVLERLPLTFLIMIVSLFFAIIIGLL-FACIRIKQIPVLKQLASVYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S       P +V + L Y   F  P L     I         + + +  S +T A+++E+
Sbjct: 60  SFT--RSTPLIVQLFLIY---FGLPQLLLVAGIQ-INHWDRMLFVMMTFSLHTGAYLSEV 113

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RS   +V + Q+EAA  +G+T  +A   +++PQA    +P L +  ++L+K++++A  +
Sbjct: 114 FRSAYSSVGKDQLEAAYIVGMTDTQALIRIIIPQAFLIALPNLGNYTIDLVKDTAIAFTI 173

Query: 345 GFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  D++     I+         E+ +I   +Y  + + I L    L  K 
Sbjct: 174 GLIDMMGQVKIILGNNYGIGMFEVYVIIAVVYWLICMSIELITMLLERKF 223



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 38/100 (38%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           TF +    +  A IIG L    R+    ++  +  VY+   R+ P +V +F +Y  +  +
Sbjct: 22  TFLIMIVSLFFAIIIGLLFACIRIKQIPVLKQLASVYLSFTRSTPLIVQLFLIYFGLPQL 81

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           L +    I     M       S  T    +      +S V
Sbjct: 82  LLVAGIQINHWDRMLFVMMTFSLHTGAYLSEVFRSAYSSV 121


>gi|320353113|ref|YP_004194452.1| PAAT family amino acid ABC transporter membrane protein 1
           [Desulfobulbus propionicus DSM 2032]
 gi|320121615|gb|ADW17161.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfobulbus propionicus DSM 2032]
          Length = 226

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 89/195 (45%)

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
             +    +          A+ L+Y +  L   L   V       +     +     F   
Sbjct: 23  AGIVVLAMLLGLALGIVIAIGLVYGNRLLRLLLGFYVWFFRGVPVLVLLFLFYFGLFTYL 82

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +     F S+ + L   T A+ A I R  ++++PRGQ  AA ALG++  +  R ++LPQ 
Sbjct: 83  NLPLNAFFSVAVVLGMTTGAYQANIFRGAILSLPRGQFRAASALGMSDVQTIRSIILPQV 142

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  IP  +++Y  +LK+S+LA  +G  ++++    + ++T Q + + L    +Y  L+ 
Sbjct: 143 LRLSIPAWSNEYSIILKDSALAFVIGAPEIMARAQFVASRTYQHLPLYLTAGLLYFLLTW 202

Query: 380 MIALFMNRLNAKIAL 394
           +    + +L  ++ +
Sbjct: 203 LGVWGLRKLEQRLRI 217


>gi|319783614|ref|YP_004143090.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169502|gb|ADV13040.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 239

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 101/239 (42%), Gaps = 4/239 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                +     +     L            + + +  +G+ +  F   L++   E + + 
Sbjct: 1   MPAQSIWTLLSWGPEGWLDDIAYGALITIALALATLPIGLTIGFFI-ALAKQSEEPSLRL 59

Query: 219 LPLLYISTFLIFGLPTLV-LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
              +Y + F   GLP LV L    + +      L ++     +     F++  I L+   
Sbjct: 60  AANIYTTVF--RGLPELVTLFLFFFGMPILLQHLVRYFRPDVTIDVNSFVAGMIVLALIF 117

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +++ +E+  S   A+P+GQ E   A+GL++    R V++PQ +R   P L + +L+LLK+
Sbjct: 118 SSYASEVFLSAFRAIPKGQYEGGYAIGLSNWLTMRKVIVPQLLRIAFPGLENCWLSLLKD 177

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SL   VG A+ +         T  A     +   ++L L+++ +   N +   +  +E
Sbjct: 178 TSLVSVVGLAETLRNASIAARVTKHAFLFFGVASLVFLGLAVLSSFATNAILRSLGRRE 236



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 69/205 (33%), Gaps = 29/205 (14%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G + T  LA + +     IG  +   + S    +     +Y  VFR +P LV 
Sbjct: 17  WLDDIAYGALITIALALATLPIGLTIGFFIALAKQSEEPSLRLAANIYTTVFRGLPELVT 76

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG-IVLSLF 203
           +F  +  +  +L            + +N                    SFV G IVL+L 
Sbjct: 77  LFLFFFGMPILLQHLVRYFRPDVTIDVN--------------------SFVAGMIVLALI 116

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
            +  +        +A+P                 I L   L   K ++ Q   I    + 
Sbjct: 117 FSSYASEVFLSAFRAIPKGQYEGGYA--------IGLSNWLTMRKVIVPQLLRIAFPGLE 168

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSG 288
             ++SL    S  +   +AE +R+ 
Sbjct: 169 NCWLSLLKDTSLVSVVGLAETLRNA 193


>gi|260662200|ref|ZP_05863096.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
 gi|260553583|gb|EEX26475.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
          Length = 235

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 99/214 (46%), Gaps = 4/214 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + + V+G++L++    + R    K     P++ +    + G P +V + + Y 
Sbjct: 19  PVTLLIAIVAAVVGLLLAILV-AVVRERQVKVLA--PIVAVIVSFVRGTPIIVQLYVVYY 75

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L     V+  + +       P  +  + A S    A ++E +RS   AV  GQ EAA+A
Sbjct: 76  GLPQLLVVMKGWGWNTNPNGLPALVIAFTAFSLNAMANLSESIRSAYHAVDYGQYEAAVA 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+T  +A   +++PQ + ++IP  T+ +L+L+K+++L   +G  +++     I     +
Sbjct: 136 VGMTPLRAMIQIVVPQLIANLIPNFTNIFLDLIKDTALVYNIGIVEIMGEANIISAIGFK 195

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +E  +  + IY+ +    A     +   I  + 
Sbjct: 196 YLETYVDALIIYIIICWFFAKLFQVIELIIRRRH 229


>gi|260555375|ref|ZP_05827596.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Acinetobacter baumannii ATCC 19606]
 gi|260411917|gb|EEX05214.1| ectoine/hydroxyectoine ABC transporter, permease EhuD
           [Acinetobacter baumannii ATCC 19606]
          Length = 219

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTG 216
            +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  
Sbjct: 1   MNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL +GLP L                              F    I L+  
Sbjct: 61  RNTPLLIQLFFLYYGLPKL------------------------GIKIDGFTCGVIGLTFL 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K
Sbjct: 97  GGSYMAEAFRAGLQSVAKGQIDSAKSIGLQPTQIFRYVIFPQALAISIPAIGANCLFLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  K
Sbjct: 157 ESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLEHK 211


>gi|319899107|ref|YP_004159200.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella clarridgeiae 73]
 gi|319403071|emb|CBI76626.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella clarridgeiae 73]
          Length = 250

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 10/215 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T   +    + +  +G+++ +  T           +A+   ++ T  +  +P L
Sbjct: 34  LDGFKNTAILSIYSLILAVFVGVIIGMIRTLPKTSIINSFLRAIGAFWVET--MRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +   P  + +  AL  +T+A IAE +RSG+ ++P G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAMNFPPILLITCALGFFTSARIAEQIRSGIESIPSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G    ++ R ++LP+A+R+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFNTYQSYRYIILPRAIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            I +     E  L+   +Y+ +S+ I + M  +  
Sbjct: 204 TIEEVSHVYENYLLVTILYILISLFIFVIMTIIER 238



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVF 136
             +Y   +L GF NT  L+   +I A  +G ++G  R        N  +  I   +VE  
Sbjct: 26  SHTYLDTLLDGFKNTAILSIYSLILAVFVGVIIGMIRTLPKTSIINSFLRAIGAFWVETM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           RNIP LV +F  Y  V  + P   +   +
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPAMNFPPI 114


>gi|306833702|ref|ZP_07466829.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424472|gb|EFM27611.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 226

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 3/208 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L    +LF   L R +  K      ++Y++         L+L      
Sbjct: 18  PVTLGIMVVSILLSFFPALFL-ALGRIYKVKGVTGFSVIYLAFIRSTPAILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +L    F             YI     T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLINQLLKATGF--NIFDINPIYYAYIIFGLMTTGSLSEIIRSAILTVDKGQLEAAQAI 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +A   ++ PQA+R  +P L +  +NL+K +SL   +   D+ ++           
Sbjct: 135 GLSTSQAYIRIVFPQAIRQALPNLCNLVINLVKGTSLVFVMTVKDITAIAKIEAAYGYHY 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E   +   IY+ +  +I      L  +
Sbjct: 195 FESYFVIFIIYIMICGLIQYGFKFLEKR 222



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +    ++ +      +  GR+   K V     +Y+   R+ P +++I F 
Sbjct: 13  ILSGIPVTLGIMVVSILLSFFPALFLALGRIYKVKGVTGFSVIYLAFIRSTPAILLILFF 72

Query: 149 YKSVLSV 155
           Y    S+
Sbjct: 73  YSLFPSL 79


>gi|294498829|ref|YP_003562529.1| sulfur-containing amino acid ABC transporter permease TcyM
           [Bacillus megaterium QM B1551]
 gi|295704151|ref|YP_003597226.1| sulfur-containing amino acid ABC transporter permease TcyM
           [Bacillus megaterium DSM 319]
 gi|294348766|gb|ADE69095.1| sulfur-containing amino acid ABC transporter, permease protein TcyM
           [Bacillus megaterium QM B1551]
 gi|294801810|gb|ADF38876.1| sulfur-containing amino acid ABC transporter, permease protein TcyM
           [Bacillus megaterium DSM 319]
          Length = 236

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 93/195 (47%), Gaps = 2/195 (1%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           A    R    K    +  +Y+S F        +++I L + L F   +   + +   +  
Sbjct: 39  AVAAVRINSVKIITPIANVYVSFFRGTPAILHIMVIYLGFPL-FINKLSSYYGWGFNANS 97

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P  + + IALS    A+++EI+RSGL+AV +GQ+EAA A+G+   ++ + ++ PQA   
Sbjct: 98  IPIVVFVLIALSFTAGAYMSEIIRSGLLAVEKGQIEAAYAIGMNRFQSMKRIVFPQAFAL 157

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L + ++  L  SS+A  V   +L      + +   + +E  +    IY  L+++I 
Sbjct: 158 SLPNLCNIFIGFLHTSSIAFIVSQKELNGAANIVASNNLKFLEAYIAAALIYWMLTMLIE 217

Query: 383 LFMNRLNAKIALKEK 397
                L  K+ +  +
Sbjct: 218 GITALLERKLTVYNR 232


>gi|271967567|ref|YP_003341763.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270510742|gb|ACZ89020.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 214

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 14/218 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      +    ++   SF+   V+ L  T + R       + +   Y+ TF    L  
Sbjct: 7   HLPEFWEGLIVTLQLTAASFLGAAVVGLVITAM-RVSPVGVLRGIGTAYVETFQNLPLLV 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                          VL  F        +   ++  + ++ Y AA+IAE +RSG+ AV  
Sbjct: 66  -------------LLVLAVFGLPEIGIKADLLVTAIVVIALYEAAYIAEALRSGVNAVSA 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALGLT  ++ R V+LPQA+R++I PL + ++ L  N+SLA A+G  DL +   
Sbjct: 113 GQGEAARALGLTFGQSLRHVILPQALRTVIQPLGNIFIALTMNTSLAAAIGVVDLTAAAN 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +     Q I I +     Y  ++        RL  ++
Sbjct: 173 RVNLMEAQPIPIFVGAGLAYALIAACAGFVTGRLERRL 210



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +      G + T  L  +  + A ++G ++ A R+S   ++  I   YVE F+N
Sbjct: 7   HLPEFWEGLIVTLQLTAASFLGAAVVGLVITAMRVSPVGVLRGIGTAYVETFQN 60


>gi|161521797|ref|YP_001585224.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189352041|ref|YP_001947668.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160345847|gb|ABX18932.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189336063|dbj|BAG45132.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 223

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 17/233 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            ++     F        L    +T+           VLG VL LFA             A
Sbjct: 1   MNYHFDFSFLAGSVGALLDGLKVTVVLAVAANAMGLVLGFVLCLFAMSR---------WA 51

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           L       F+ F   T  L+ + +  +    ++  F                +AL     
Sbjct: 52  LVRWPAQLFIEFFRCTPALLQIIWFFYCIPMMVDVF--------IDPITMGVLALGLNLT 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF AE  R+G+ AVP+  ++AA+ALGL   + T  V+LPQA+R+ +P L +  +  L+ S
Sbjct: 104 AFNAEAYRAGVQAVPKEHLDAAVALGLRPWQRTIFVVLPQALRNAMPVLLTNGIGSLQQS 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   V  ADL+ V  ++  Q  + +E   +   +Y +LS+ IA  ++ +  +
Sbjct: 164 ALVAIVAVADLMYVAKSLATQAYRPLETYSVVALVYFALSLPIARLVHVIERR 216



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   T  LA +      ++G ++    +S   LV W  ++++E FR  P L+ I +
Sbjct: 16  ALLDGLKVTVVLAVAANAMGLVLGFVLCLFAMSRWALVRWPAQLFIEFFRCTPALLQIIW 75

Query: 148 LYKSVLSV 155
            +  +  +
Sbjct: 76  FFYCIPMM 83


>gi|116252666|ref|YP_768504.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115257314|emb|CAK08409.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 220

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 103/223 (46%), Gaps = 18/223 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +G       L     T   +   F  +FV G++LSL      +       +    LY++
Sbjct: 10  DYGAEWLPLLLRAMVNTALLSICAFALAFVFGLLLSLC-----QKSSFAALRYFAALYVT 64

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             ++ G+P L ++ L Y           F   G   V   F +    L+   AA +AE+ 
Sbjct: 65  --IMRGVPLLAVLFLLY-----------FGLPGIGVVFDAFGAAIAGLALCFAAQVAELF 111

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL A+P GQ EAA+A G T  ++   ++LPQ  R I+ P+   +++LLK+SSLA  + 
Sbjct: 112 RAGLKAIPAGQSEAALAAGFTPAQSFVWIILPQVARVILAPMIITFVSLLKDSSLASLIT 171

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             +LV  G ++  +    ++I +     Y +++   ++   RL
Sbjct: 172 VDELVLTGRSMATEYFLPLQIYVAVGLCYFAIAGPFSVLSRRL 214



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L   VNT  L+      A + G L+   + S+   + +   +YV + R +P L V
Sbjct: 15  WLPLLLRAMVNTALLSICAFALAFVFGLLLSLCQKSSFAALRYFAALYVTIMRGVPLLAV 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +F LY  +  +  + D       G+ L               A 
Sbjct: 75  LFLLYFGLPGIGVVFDAFGAAIAGLALCFAAQVAELFRAGLKAI 118


>gi|308175098|ref|YP_003921803.1| L-cystine transport system permease TcyM [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607962|emb|CBI44333.1| L-cystine transport system permease protein TcyM [Bacillus
           amyloliquefaciens DSM 7]
          Length = 235

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 3/222 (1%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT- 234
           +     T+     + V   + G  ++L      R F  K   A    Y+S F        
Sbjct: 12  IKQMMKTVPLTLAMTVIPIIAGFFIAL-GNITVRIFRIKWLLAFSAFYVSFFRSTPAILH 70

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++LI L   L  D      F+    +   P  + + +ALS    A++ EI+RSG++AV  
Sbjct: 71  IMLIYLGVPLIADH-FSRTFHLGWSANQIPVAVFVIMALSLTAGAYMTEILRSGIMAVDT 129

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++GLT  +  R V+LPQA    +P  T+  +  L  +S+A  V   ++     
Sbjct: 130 GQAEAAYSIGLTRGQMIRRVILPQAFMISLPNFTNIGIGFLHTTSIAAIVAVPEITGTAT 189

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +     +E  +    IY  L++++         + A  +
Sbjct: 190 IAASDNYAFLEAFIGAAVIYWGLTLILEAVNTLAEKRAARYQ 231


>gi|159026343|emb|CAO86432.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 241

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 18/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + SF LG++L+L      R       + L + YI       L  L L+ + +  
Sbjct: 47  VAIASMILSFPLGVLLAL-----GRQSELPAIRWLSIGYIEL-----LRGLPLLGILFMA 96

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P++     +   T     +      + + AA++AE VR GL A+P+GQ+EAA ALG
Sbjct: 97  QVMLPLI-----LPAGTRPERVIRAIAGFTLFAAAYLAENVRGGLQAIPKGQIEAARALG 151

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TG 361
           L       L++LPQA++++IP +  Q+++L K++SL   VG  DL+ + G+++      G
Sbjct: 152 LKPIFVLLLIVLPQALKAVIPAIVGQFISLFKDTSLLAIVGLVDLLGMAGSVLANPKFIG 211

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              E+ L   FIY      ++L   RL  +
Sbjct: 212 DYPEVYLFLAFIYWIFCYSMSLASRRLEQR 241



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 5/195 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  +A + MI +  +G L+  GR S    + W+   Y+E+ R +P L ++F   
Sbjct: 38  LSGLILTLLVAIASMILSFPLGVLLALGRQSELPAIRWLSIGYIELLRGLPLLGILFMAQ 97

Query: 150 KSVLSVLPIPDHSI-----VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
             +  +LP           +  F +F            +    K  + +     +  +F 
Sbjct: 98  VMLPLILPAGTRPERVIRAIAGFTLFAAAYLAENVRGGLQAIPKGQIEAARALGLKPIFV 157

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             L             ++     L      L ++ L   L     VL    FIG      
Sbjct: 158 LLLIVLPQALKAVIPAIVGQFISLFKDTSLLAIVGLVDLLGMAGSVLANPKFIGDYPEVY 217

Query: 265 EFMSLYIALSCYTAA 279
            F++    + CY+ +
Sbjct: 218 LFLAFIYWIFCYSMS 232


>gi|227818924|ref|YP_002822895.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337923|gb|ACP22142.1| amino acid ABC transporter, permease protein [Sinorhizobium fredii
           NGR234]
          Length = 226

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 4/207 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I VF   LG+   +    + R    +       +Y + F   G P LV I + Y    
Sbjct: 21  LLISVFGVALGLPFGIAL-AVIRASKHRMLSRSADIYCAVF--RGTPMLVQIFVIYY-GL 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            +    + N +    V     +  +A+   T A+ AEI R+ L+++PRG +EA+ A GL+
Sbjct: 77  GQLSAIRSNPVIWWIVGDSLHAAILAVVLNTGAYTAEIFRTALLSLPRGLIEASQACGLS 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V  P A+R  +P  +S+   ++K SSLA  +   ++      ++++T   ++I
Sbjct: 137 VWSTFRHVRFPLAVRQALPAYSSEVAIIVKESSLASTITVLEITGYAKRLMSETFAIMDI 196

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +I    YL ++++    +  +  K++
Sbjct: 197 FIITSAFYLMMNVISLTSLKLIERKLS 223



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 4/134 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  ++  G+      G  +   R S +++++    +Y  VFR  P LV IF +
Sbjct: 13  LLVGAKITLLISVFGVALGLPFGIALAVIRASKHRMLSRSADIYCAVFRGTPMLVQIFVI 72

Query: 149 YKSVLS-VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF---VFSFVLGIVLSLFA 204
           Y  +        +  I    G  L+   L+    T    A+IF   + S   G++ +  A
Sbjct: 73  YYGLGQLSAIRSNPVIWWIVGDSLHAAILAVVLNTGAYTAEIFRTALLSLPRGLIEASQA 132

Query: 205 TRLSRHFHEKTGKA 218
             LS     +  + 
Sbjct: 133 CGLSVWSTFRHVRF 146


>gi|224826828|ref|ZP_03699928.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224601048|gb|EEG07231.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 237

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 88/220 (40%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                 +    +     + V S  +G VL++    ++R       +    ++  T++  G
Sbjct: 12  YLWSDGYHLSGVAMTLWLLVASIGIGFVLAVPL-AVARVSPNPLIRGP--VWFYTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +    +     +  +          +A +  T A+  EI    + A
Sbjct: 69  TPLYIQLLVFYTGIYSIESVRAQPLLD-AFFREGINCTLLAFALNTCAYTVEIFAGAIRA 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            P G++EAA A G++     R V+LP A+R  +P  +++ + +L +++LA      D++ 
Sbjct: 128 TPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHSTTLAFTATVPDILK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           V   + + T  + E   I   +Y  +   +     R   +
Sbjct: 188 VARDVNSATYASFEAFGIAGALYAVIVFALVWLFRRGEQR 227



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +    ++   +   R+S N L+      Y  VFR  P  + +   Y
Sbjct: 20  LSGVAMTLWLLVASIGIGFVLAVPLAVARVSPNPLIRGPVWFYTYVFRGTPLYIQLLVFY 79

Query: 150 KSVLSV 155
             + S+
Sbjct: 80  TGIYSI 85


>gi|70730912|ref|YP_260653.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68345211|gb|AAY92817.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 213

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 14/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + +F +G+VL      L R  + K  + L  + + T         +       
Sbjct: 13  PWTLSVTLGAFCIGVVLGFPLCAL-RLSNLKLCRWLAAILVLTLRSIPPIVWLFFIFF-- 69

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                         GG      F +  + L   TAA ++E+ R    A+P+GQ EAA  L
Sbjct: 70  -----------GIGGGYIALSPFAAAVLGLGLITAAHMSEVYRGAFAAIPQGQYEAAQVL 118

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            L+  +    V+LPQ +R  IP   +  + LLK+S++A  +G  D+      +  QT Q 
Sbjct: 119 NLSAPQRFFDVMLPQLVRIAIPTSATYAIGLLKDSAVASTIGVGDVSFQAYQMSQQTFQG 178

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +E+  +   +YL LS+ +ALF   L+A +  +  +
Sbjct: 179 LEVYSVAALVYLILSVPVALFSRWLSATLKQRIAR 213



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               +L G   T  +         ++G  + A RLS  KL  W+  + V   R+IPP+V 
Sbjct: 4   ILLVLLRGVPWTLSVTLGAFCIGVVLGFPLCALRLSNLKLCRWLAAILVLTLRSIPPIVW 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +FF++  +               G+
Sbjct: 64  LFFIFFGIGGGYIALSPFAAAVLGL 88


>gi|332041715|gb|EGI78067.1| polar amino acid ABC transporter inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 222

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 105/235 (44%), Gaps = 13/235 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            +VL F  F  +   S+    +  +  + V + + GI        L R    K+ + +  
Sbjct: 1   MMVLDFSFFTWDVFRSYVLGGLWFSLALTVIATLGGIFFGTLL-ALMRLSGIKSLEMVAA 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y++         L+++ L + L             G         S  I    + AA+ 
Sbjct: 60  VYVNGMRSIP---LLMVLLWFFLLVPLVTGHPIGAEG---------SAVITFIAFEAAYF 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+R+G+ ++PRGQ+ A  A+G+++ +  + V+LPQA R+++P L +Q + L +++SL 
Sbjct: 108 SEIMRAGIQSIPRGQVFAGYAMGMSYAQNMKFVILPQAFRNMLPVLMTQTIILFQDTSLV 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   DL+       N      E  ++   +Y  +   ++  + RL  KIA+  
Sbjct: 168 YIITAHDLLHGFTVAGNNLSHPREAYILAALLYFVICYSLSNAVKRLQQKIAIIR 222



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 70/200 (35%), Gaps = 8/200 (4%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             + + +L G   +  L     +     GTL+   RLS  K +  +  VYV   R+IP L
Sbjct: 12  DVFRSYVLGGLWFSLALTVIATLGGIFFGTLLALMRLSGIKSLEMVAAVYVNGMRSIPLL 71

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V+ + +  V  V   P  +       F+      F  +       I       G  + +
Sbjct: 72  MVLLWFFLLVPLVTGHPIGAEGSAVITFIAFEAAYFSEIMRAGIQSIPRGQVFAGYAMGM 131

Query: 203 FATRLSR--HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
              +  +     +     LP+L   T ++F   +LV I   + L      L  F   G +
Sbjct: 132 SYAQNMKFVILPQAFRNMLPVLMTQTIILFQDTSLVYIITAHDL------LHGFTVAGNN 185

Query: 261 TVSPEFMSLYIALSCYTAAF 280
              P    +  AL  +   +
Sbjct: 186 LSHPREAYILAALLYFVICY 205


>gi|325267600|ref|ZP_08134252.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Kingella denitrificans ATCC 33394]
 gi|324980950|gb|EGC16610.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Kingella denitrificans ATCC 33394]
          Length = 219

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   + +    R      LT++  A   V S  +G+  ++        +       L   
Sbjct: 1   MNWHYIIQAAPRFFHAAKLTLELAAYGIVLSLAVGLAAAVCM-----AYRLPVLDRLSRG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   L    P L+ +   Y                       F    IAL      ++A
Sbjct: 56  YVE--LSRNTPLLIQLFFLYY-----------GLPKIGIKIDGFTCGVIALVFLGGGYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R+GL+AVP+GQ EAA A+GL + +  R V+LPQA    +P + +  L L+K +S+  
Sbjct: 103 EALRAGLLAVPKGQTEAAKAIGLGNVQIFRYVVLPQAWAVSLPAIAANVLFLIKETSVIG 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           AV  A+L+ V   II    +  E + +    YL + + ++++      K+  
Sbjct: 163 AVSVAELMFVTKDIIGMDYKTNEALFLLFVSYLIILLPVSVWARYAERKVRR 214



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  LA  G++ +  +G            ++  + R YVE+ RN P L+ +FFLY  +  +
Sbjct: 20  TLELAAYGIVLSLAVGLAAAVCMAYRLPVLDRLSRGYVELSRNTPLLIQLFFLYYGLPKI 79

Query: 156 LPIPD 160
               D
Sbjct: 80  GIKID 84


>gi|319780066|ref|YP_004139542.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317165954|gb|ADV09492.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 283

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 3/205 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            + +I + +  LG+++        + +     +   LL + T ++  +P LVLI L Y  
Sbjct: 68  HSIEIALGATCLGLLIGT-GGAYGKLYGGPVVRD--LLAVYTTIVRAVPELVLILLLYYA 124

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D                    +    L     A+  E++R  ++A+P+GQ+EAA A G
Sbjct: 125 GTDLINQALTAMGYQRVDVSGLAAGIAVLGFVQGAYSTEVIRGAILAIPQGQIEAARAYG 184

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R + LP  +   IP L + +L   K+++L   VGF +L          T    
Sbjct: 185 MSPGLMLRRITLPSMLPFAIPGLANLWLIATKDTALLAVVGFYELALATRQAAGVTKAYF 244

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
                   +YL LS+   L + R+ 
Sbjct: 245 TFFFAAGVLYLLLSLFSNLVIGRVE 269



 Score = 43.8 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 73/173 (42%), Gaps = 7/173 (4%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I + + PY     +  A+LVG +++  +A        +IGT    G+L    +V  +  
Sbjct: 46  GITELLSPYPPG--WGGALLVGLLHSIEIALGATCLGLLIGTGGAYGKLYGGPVVRDLLA 103

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           VY  + R +P LV+I  LY +   +    + ++       ++  GL+     +      +
Sbjct: 104 VYTTIVRAVPELVLILLLYYAGTDL---INQALTAMGYQRVDVSGLAAGIAVLGFVQGAY 160

Query: 191 VFSFVLGIVLSLFATRL--SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
               + G +L++   ++  +R +    G  L  + + + L F +P L  + L 
Sbjct: 161 STEVIRGAILAIPQGQIEAARAYGMSPGLMLRRITLPSMLPFAIPGLANLWLI 213


>gi|307289497|ref|ZP_07569443.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306499515|gb|EFM68886.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|315164602|gb|EFU08619.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
          Length = 214

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 96/206 (46%), Gaps = 19/206 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S  LGI+++            K  + L  LYI  +L+ G P L+ +   +  
Sbjct: 22  VFFFTLLGSIPLGIIIAFILQ-----SSFKPLRYLINLYI--WLMRGTPLLLQLIFVF-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P++          V   + +   A     AA+ AEI R G+ A+P+GQ EAA  L 
Sbjct: 73  -YGLPLI--------GIVFERYDAALFAFILNYAAYFAEIFRGGIQAIPQGQYEAAKVLR 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    ++LPQ ++ ++P + ++ +NL+K++SL   +G  DL+  G   +++    +
Sbjct: 124 LTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLRAGKIAMSRD-VTL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
             + +   IYL  + ++ +   ++  
Sbjct: 183 VPLALVGVIYLFFTAILTVASKKIEK 208



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 40/104 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A++ G   T  + F  ++ +  +G ++     S+ K + ++  +Y+ + R  P L+ 
Sbjct: 8   ILPALVSGAGMTLKVFFFTLLGSIPLGIIIAFILQSSFKPLRYLINLYIWLMRGTPLLLQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F++  +  +  + +      F   LN              A 
Sbjct: 68  LIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFRGGIQAI 111


>gi|188534745|ref|YP_001908542.1| Putative amino acid ABC transporter, permease protein [Erwinia
           tasmaniensis Et1/99]
 gi|188029787|emb|CAO97666.1| Putative amino acid ABC transporter, permease protein [Erwinia
           tasmaniensis Et1/99]
          Length = 221

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V     G+ L +    L         +A     +   LI   
Sbjct: 11  WPYWPELVSGLWVTIQLTVMVTTGGVALGILGAALRSGRPSLLSRA---WGVYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPNLGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT R+    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLTRRQTFMRVVLPPALKRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              I ++T  + E+ L+   +YL+LSI +   +
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLMYLALSIAMRQLL 209



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 37/96 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   ++ G   T  L          +G L  A R     L++    VYVE+ 
Sbjct: 5   LNFPALWPYWPELVSGLWVTIQLTVMVTTGGVALGILGAALRSGRPSLLSRAWGVYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLIN 100


>gi|170754761|ref|YP_001781055.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum B1 str. Okra]
 gi|169119973|gb|ACA43809.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum B1 str. Okra]
          Length = 221

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 84/182 (46%), Gaps = 10/182 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K   ++  +++S F   G P +  +   Y              I          +  
Sbjct: 46  LKIKVLYSISKIWVSFF--RGTPLIAQLFFLYFGIVQL--------IPSLKNMDAMTAAI 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + +  PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIAFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K S+LA  +G  ++++V  +    + + +E     + IY  +        N L  
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQSEGASSYRFLESFTAVIIIYWIIISAFGYLQNILER 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|24636877|sp|Q8RQL5|GLUC_COREF RecName: Full=Glutamate transport system permease protein gluC
 gi|20126699|dbj|BAB88900.1| gluC [Corynebacterium efficiens]
          Length = 228

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 7/230 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              L    L    +T+       + S +LG +L+       R    K  +++   YI+T 
Sbjct: 5   WADLGPSLLPAFWVTIQLTVYSAIGSMILGTILTAM-----RVSPVKILRSISTAYINTV 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               L TLV++   + L+ +  +               F    +    YT+AF+AE +RS
Sbjct: 60  RNTPL-TLVILFCSFGLYQNLGLTLAGRDSSTFLADNNFRLAVLGFILYTSAFVAESLRS 118

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +  + L KN+++A  +G  
Sbjct: 119 GINTVHFGQAEAARSLGLGFSDIFRSIIFPQAVRAAIIPLGNTLIALTKNTTIASVIGVG 178

Query: 348 DLVSVGG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +   TI N       +  I+   ++ L++ + L + +L  K+A+K+
Sbjct: 179 EASLLMKSTIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLAEKMAVKK 228



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 42/99 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     I + I+GT++ A R+S  K++  I   Y+   RN P  +VI F 
Sbjct: 12  LLPAFWVTIQLTVYSAIGSMILGTILTAMRVSPVKILRSISTAYINTVRNTPLTLVILFC 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              +   L +          +  NN  L+     + T+A
Sbjct: 72  SFGLYQNLGLTLAGRDSSTFLADNNFRLAVLGFILYTSA 110


>gi|49082046|gb|AAT50423.1| PA2925 [synthetic construct]
          Length = 238

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 88/228 (38%), Gaps = 4/228 (1%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           VL                 +     + + +  LG +L++    ++R       +    LY
Sbjct: 4   VLDEYWQAYLWTDGLQLTGLAMTLWLLILAVALGFLLAIPL-AVARTCGNPLLRYPVWLY 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T++  G P  + +   Y   +    +   +F+  +     F    +A    T A++ E
Sbjct: 63  --TYVFRGTPLYIQLLFFYTGVYSLNAIRAQDFL-NAFFRDGFNCTVLAFVLNTCAYMTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    +   P G++EAA A G+      R ++LP A+R  +P  +++ + +L ++S+A  
Sbjct: 120 IFAGAIRNTPHGEVEAARAYGMGGFTLYRRIVLPSALRRALPYFSNEVILMLHSTSVAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               DL+ V   + + T        I   +Y   + ++     R   +
Sbjct: 180 ATVPDLLKVARDVNSATYAPFLSFGIAGALYAGTAFLLIWLFRRGELR 227



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    +    ++   +   R   N L+ +   +Y  VFR  P  + + F Y
Sbjct: 20  LTGLAMTLWLLILAVALGFLLAIPLAVARTCGNPLLRYPVWLYTYVFRGTPLYIQLLFFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             V S+  I     +  F 
Sbjct: 80  TGVYSLNAIRAQDFLNAFF 98


>gi|54296523|ref|YP_122892.1| hypothetical protein lpp0554 [Legionella pneumophila str. Paris]
 gi|53750308|emb|CAH11702.1| hypothetical protein lpp0554 [Legionella pneumophila str. Paris]
          Length = 215

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 19/209 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       +   +LG +LS+   +         G A  ++     ++ G P ++ ++  Y
Sbjct: 19  MQLLTGGMLIGVLLGTLLSICRHQ---------GVAGFVINRFISILRGTPLILQLSFIY 69

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              F  PVL               ++  +A    ++A+ AEI+RSG+ ++P+GQ EAA+ 
Sbjct: 70  ---FAVPVLLGM-------RPSILVAGIVAFGLNSSAYFAEILRSGIESLPKGQFEAALT 119

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           L +      + ++LPQ +++I P + ++ + LLK ++L   +G  DL+    T+  Q   
Sbjct: 120 LQIPTFYLWKDIILPQVIKNIFPAMINEMIALLKETALISTIGGMDLMRQAQTLAAQQFT 179

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + I  F Y SL +++     ++  +
Sbjct: 180 YFMPLCITGFYYYSLVLLLEALGKKIEKR 208


>gi|124265637|ref|YP_001019641.1| putative ABC transporter protein glutamate/aspartate transmembrane
           subunit [Methylibium petroleiphilum PM1]
 gi|124258412|gb|ABM93406.1| putative ABC transporter protein, putative glutamate/aspartate
           transmembrane subunit [Methylibium petroleiphilum PM1]
          Length = 246

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 91/178 (51%), Gaps = 8/178 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + + L    T +   +P LV + L Y            +        P F+ +  AL  +
Sbjct: 70  RLVFLGNAWTEIFRNVPLLVQVFLWY--------HVIPSLFTSLRSVPSFVLVVFALGFF 121

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+A IAE V++G+ ++PRGQ  A +A+GLT  +  R VLLP A R +IPPLTS+ +N++K
Sbjct: 122 TSARIAEQVKAGIQSLPRGQSYAGLAMGLTLGQTYRHVLLPMAFRIVIPPLTSESMNIIK 181

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           NSS+A AV  A+L         +T + +E+ L    +Y   +  I   M  +  ++ +
Sbjct: 182 NSSVAFAVSIAELTMFAMQAQEETSRGVEVYLAVTALYFISAFAINRIMLVVEERLRV 239



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 42/87 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++  +  T  +A   ++ A ++G+LVG  R   +K + ++   + E+FRN+P LV
Sbjct: 30  TYLDWMISAWGWTLSVALLALLVALLVGSLVGILRTLPDKRLVFLGNAWTEIFRNVPLLV 89

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            +F  Y  + S+             +F
Sbjct: 90  QVFLWYHVIPSLFTSLRSVPSFVLVVF 116


>gi|297627338|ref|YP_003689101.1| Polar amino acid ABC transporter, inner membrane subunit
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296923103|emb|CBL57690.1| Polar amino acid ABC transporter, inner membrane subunit
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 218

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 98/232 (42%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          L      +  + ++   + V+G+   L              +  PL ++
Sbjct: 1   MSDTFSFWWANLPQMLGGLVVSLELTGLALVIGMPFGLLLAIGMG------SRLAPLRWL 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++     +  + + Y ++F  P +               +   IAL+  T  +  E 
Sbjct: 55  CIGVVEVGRGVPALVMLYVVYFGLPAIH--------WSPTAMVCAVIALAFTTGGYTGEY 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL++V  G  EA +AL +      R V++PQ MR  IP L    + + + +SLA ++
Sbjct: 107 IRGGLVSVGEGTWEAGLALAMPTADVLRFVVVPQGMRVAIPSLMGLAIQIFQATSLAYSI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++L +   +I + + +A+EI  +   IY  ++I      NR+  +++L+E
Sbjct: 167 TVSELTAQAYSISSSSFRALEIFGLAGIIYAIITIPATWVANRVERRLSLRE 218



 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 80  TSDSSYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +   S+  A    +L G V +  L    ++     G L+  G  S    + W+C   VEV
Sbjct: 2   SDTFSFWWANLPQMLGGLVVSLELTGLALVIGMPFGLLLAIGMGSRLAPLRWLCIGVVEV 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            R +P LV+++ +Y  + ++   P   
Sbjct: 62  GRGVPALVMLYVVYFGLPAIHWSPTAM 88


>gi|237801378|ref|ZP_04589839.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806661|ref|ZP_04593365.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024237|gb|EGI04294.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027775|gb|EGI07830.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 216

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 13/182 (7%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               K    L   Y+S F     P +V +   Y L F  P+             P   + 
Sbjct: 45  RSQAKLVHYLSKGYLSFF--RNTPLMVQL---YVLFFALPL--------AGITFPAITTG 91

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I L CY AA+IAE  R  +  +P GQ EAA AL        R ++LPQA++ ++P L +
Sbjct: 92  VIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFDRGDTWRRLILPQALKPMLPVLGN 151

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             + + K + L   +   +L      I   T +  E   +   ++L++S+  +L    L 
Sbjct: 152 YLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLE 211

Query: 390 AK 391
            +
Sbjct: 212 RR 213


>gi|148379377|ref|YP_001253918.1| amino acid ABC transporter permease [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933606|ref|YP_001383753.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. ATCC 19397]
 gi|153935113|ref|YP_001387303.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A str. Hall]
 gi|148288861|emb|CAL82945.1| putative ABC transporter, membrane protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152929650|gb|ABS35150.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. ATCC 19397]
 gi|152931027|gb|ABS36526.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A str. Hall]
          Length = 221

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 84/182 (46%), Gaps = 10/182 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K   ++  +++S F   G P +  +   Y              I             
Sbjct: 46  LKIKVLYSISKIWVSFF--RGTPLIAQLFFLYFGIVQL--------IPSLKNMDAMTVAI 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ + ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTPIQSMKRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K S+LA  +G  ++++V  +    + + +E     + IY  +        N L  
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQSEGASSYRFLESFTAVIIIYWIIISAFGYLQNILER 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|145297728|ref|YP_001140569.1| arginine transporter permease subunit ArtM [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850500|gb|ABO88821.1| ABC-type arginine transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 220

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 11/194 (5%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L A  ++    ++   A  L+ +   +  G P L+ I L Y         GQF ++    
Sbjct: 28  LMAAAMTWVLEQRIPVATQLVQLWVLIFTGTPLLIQIFLIYYGP------GQFEWLKSGP 81

Query: 262 VSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
           + P     +    +AL   TAA+   + +  L A+P G++EA  ALG +  +    + + 
Sbjct: 82  LWPLLKQPWFCAVLALGFNTAAYSTRLFKGALDAIPSGEVEACRALGFSAGQTLW-MKVR 140

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
            A R ++P  +++ + +LK SSLA  +   D++ +   +  QT   + +  +   +YL++
Sbjct: 141 HAARRLVPAYSNEVILVLKGSSLASTITIMDVMGLAQRLNAQTYDTLAVFTVAGALYLTM 200

Query: 378 SIMIALFMNRLNAK 391
           + ++ +       +
Sbjct: 201 NGLLTIGFRWCERR 214


>gi|159186208|ref|NP_356121.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159141342|gb|AAK88906.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 222

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 14/204 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +    L  VL +    ++R    K  + L + ++    I   P LV I   +    
Sbjct: 25  IGLAIAGMSLATVLGVLG-VVARRSRFKLLRGLVIGFVEA--IRNTPFLVQIFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F            ++  IAL+    A+  EI+R G+ ++P+GQ+EA +ALGL 
Sbjct: 78  -------FALPQIGIKLNPTVTAIIALALNGGAYAIEIIRGGVDSIPKGQVEAGLALGLH 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++L  A+R++ P LTSQ++ L   +S+  ++   +L SV   I   T ++ E+
Sbjct: 131 RAQIFRHIILKPALRAVYPSLTSQFIMLTLTTSVCTSIAAYELTSVAQKIEADTFRSFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
                 +YL +S ++      ++ 
Sbjct: 191 YFSITLLYLVISSLMMGIFALISR 214



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+  + T  LA +GM  AT++G L    R S  KL+  +   +VE  RN P LV IFF+
Sbjct: 17  LLLACLATIGLAIAGMSLATVLGVLGVVARRSRFKLLRGLVIGFVEAIRNTPFLVQIFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  +    + ++     + LN    +   +    ++ I       G+ L L   ++ 
Sbjct: 77  FFALPQIGIKLNPTVTAIIALALNGGAYAIEIIRGGVDS-IPKGQVEAGLALGLHRAQIF 135

Query: 209 RHFHEKT 215
           RH   K 
Sbjct: 136 RHIILKP 142


>gi|298486823|ref|ZP_07004879.1| ABC-type amino acid transport system, permease component
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298158690|gb|EFH99754.1| ABC-type amino acid transport system, permease component
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 216

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y L F  P+             P   +  I L CY AA+IAE  R  +  +P GQ
Sbjct: 67  LMVQLYVLFFALPL--------AGITFPAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL  +     R ++LPQA++ ++P L +  + + K + L   +   +L      I
Sbjct: 119 WEAARALDFSRSDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQI 178

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T +  E   +   ++L++S+  +L    L  +
Sbjct: 179 AGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 213


>gi|304395806|ref|ZP_07377689.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357100|gb|EFM21464.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 239

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 88/202 (43%), Gaps = 2/202 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + ++G V+       ++    +  + L   Y   F       LV+    +        +G
Sbjct: 30  ALLVGAVVG-SGVAAAKLSPHRAVRWLGESYSVIFRGI-PELLVIYLFYFGGSGLITQIG 87

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q     G   +P F+   +A+   + ++ AE+ R+  +A+ +G++EAA+A+G+   +  +
Sbjct: 88  QLFGADGFIEAPPFLIGALAIGLISGSYQAEVYRAARLALAKGEIEAAVAIGMPRWRIRQ 147

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +LLPQ  R  +P L++ +   LK+S+L    G  +L+         T       L+   
Sbjct: 148 RILLPQVARYALPGLSNVWQMSLKDSALVSVTGIVELMRASQIAAGSTRDYFSFYLVGGA 207

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
            YL L+++      R  +++  
Sbjct: 208 CYLLLTLLSNRAFLRAESRLGR 229



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 36/70 (51%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             +   IL   + T  L+F  ++   ++G+ V A +LS ++ V W+   Y  +FR IP L
Sbjct: 10  DGWGRLILSATLTTLLLSFCALLVGAVVGSGVAAAKLSPHRAVRWLGESYSVIFRGIPEL 69

Query: 143 VVIFFLYKSV 152
           +VI+  Y   
Sbjct: 70  LVIYLFYFGG 79


>gi|257784250|ref|YP_003179467.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
 gi|257472757|gb|ACV50876.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
          Length = 217

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 14/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L            I  F  +  +++ L + ++S          L  +Y+   L  G P 
Sbjct: 9   HLPLYAEAAKITLTISFFGVIFSLIVGLISAQIS-LSKIPILSQLNSVYVE--LSRGTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ + L Y           F             +  + L+    +++AE  R+G  +V  
Sbjct: 66  LIQLFLIY-----------FGLTKVGLKMDAEAAAVVGLTFLGGSYMAEAFRAGFESVAA 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q E+A  LGL+  +  + V+LPQA+   +P   +  + L+K SS+   +  ADL+ V  
Sbjct: 115 IQFESAQVLGLSKIQTLQHVILPQALSVAVPGFVANVIFLIKESSVVSGIALADLMYVTK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            II       E + + +  Y+ + + I+L  + L  ++    +
Sbjct: 175 DIIGMQYDTTEALFMLVIAYVIILVPISLIGSWLERRLDYARR 217



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++F G+I + I+G +     LS   +++ +  VYVE+ R  P L+ +F +Y  +  V
Sbjct: 20  TLTISFFGVIFSLIVGLISAQISLSKIPILSQLNSVYVELSRGTPLLIQLFLIYFGLTKV 79

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
               D       G+                 +   +
Sbjct: 80  GLKMDAEAAAVVGLTFLGGSYMAEAFRAGFESVAAI 115


>gi|227514517|ref|ZP_03944566.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087074|gb|EEI22386.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 224

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 19/210 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + S  LGI++SL  T   +           +L +  +L+ G P L+ +   + 
Sbjct: 31  QLFFWTLIGSLPLGIIVSLGLTSKIKPLKW-------VLEMYVWLMRGTPLLLQLIFVF- 82

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++          V   + +  +A     AA+ AEI R GL ++ +GQ E A  L
Sbjct: 83  --YGLPII--------GIVFQRYDAALVAFILNYAAYFAEIFRGGLQSISQGQYEGARVL 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            L++ +  R +++PQ ++ +IP + ++ +NL+K+SSL   +G  DL+  G    ++    
Sbjct: 133 RLSYWQTVRKIVIPQVVKIVIPSIGNEVINLIKDSSLVYVIGLGDLLRAGNVATSRDVTL 192

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + ++L+ +   L +  +  + +  +  + +
Sbjct: 193 VPLLLVGLIY-LLMVGVCTVILRWVEKRYS 221



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 36/101 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L F  +I +  +G +V  G  S  K + W+  +YV + R  P L+ + F+
Sbjct: 22  LFQGAGLTLQLFFWTLIGSLPLGIIVSLGLTSKIKPLKWVLEMYVWLMRGTPLLLQLIFV 81

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +  +  +  +            LN              +  
Sbjct: 82  FYGLPIIGIVFQRYDAALVAFILNYAAYFAEIFRGGLQSIS 122


>gi|226951614|ref|ZP_03822078.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter sp. ATCC 27244]
 gi|294651271|ref|ZP_06728597.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226837644|gb|EEH70027.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter sp. ATCC 27244]
 gi|292822837|gb|EFF81714.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, permease protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 227

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 10/237 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +   +  L              ++T+       +    +G +L+L      R    K   
Sbjct: 1   MEWLTSFLNDLQQSGPALWHGFSITIKVVVIATIGGIFIGTLLALM-----RLSSIKVLN 55

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +   Y++ F      ++ L+ +    +F  P +         T+    +S  +A   + 
Sbjct: 56  LIAQAYVNLFR-----SIPLLLVLMWFYFAVPFIYTSITGKYLTIDTALVSSIVAFMLFE 110

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +EIVR+G+ ++P+GQ+ AA ALG+++ ++ RL++LPQA R + P L  Q + L ++
Sbjct: 111 AAYFSEIVRAGIQSIPKGQVAAAAALGMSYGQSMRLIILPQAFRKMTPLLLQQTIILFQD 170

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++  A+G  D         +  G   + IL    +Y ++S +    + RL  ++ +
Sbjct: 171 STMVYAIGLLDFFRTNYVRGDLMGLLTQYILFAGLVYFTVSAIATFAVKRLQRRLRV 227



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+  GF  T  +     I    IGTL+   RLS+ K++  I + YV +FR+IP L+V+
Sbjct: 15  GPALWHGFSITIKVVVIATIGGIFIGTLLALMRLSSIKVLNLIAQAYVNLFRSIPLLLVL 74

Query: 146 FFLYKSVLSVL 156
            + Y +V  + 
Sbjct: 75  MWFYFAVPFIY 85


>gi|2668596|gb|AAC71071.1| membrane protein [Pseudomonas aeruginosa PAO1]
          Length = 229

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 6/193 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S +L IVL L      R    +       LY    ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALLSMLLAIVLGLLGAAF-RLSPVRWLAWCGDLY--ATVVRGIPDLVLILLIFY 70

Query: 244 LHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                   V  Q  +     ++P F+S    L     A+++E  R   +A+P+GQ EA  
Sbjct: 71  GGQGLLNWVAPQLGYDDYIDLNP-FVSGVGTLGFIFGAYLSETFRGAFMAIPKGQGEAGY 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
             G++HR+    + +PQ +R  IP  T+ +L L+K ++L   VG  D++       + T 
Sbjct: 130 GYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVGLQDMMFKAKQASDATR 189

Query: 362 QAIEIILIWMFIY 374
           +     L    +Y
Sbjct: 190 EPFTYYLAVAGLY 202



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 40/90 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I+ G   T  LA   M+ A ++G L  A RLS  + +AW   +Y  V R IP LV+
Sbjct: 5   YGATIVDGAWLTLQLALLSMLLAIVLGLLGAAFRLSPVRWLAWCGDLYATVVRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           I  ++     +L      +     + LN  
Sbjct: 65  ILLIFYGGQGLLNWVAPQLGYDDYIDLNPF 94


>gi|298717121|ref|YP_003729763.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361310|gb|ADI78091.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 241

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 91/228 (39%), Gaps = 6/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+   +T+  +   ++   +LG +L       SR         L   YI+ F   
Sbjct: 17  WGGVLLNAAAVTVSVSLCAWLLGALLGSMLCWMQIAGSRWQQR-----LAAGYITLFR-G 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV+    +        +G      G      F++  IA+   + A+ + + R    
Sbjct: 71  VPELLVIYLFYFGGRQVVSAVGTALGFQGPFDVNGFVAGAIAIGLISGAYQSGVFRGAFY 130

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P G +EAA   G+      R +++PQA+R+ +P + +Q+ +++K S+L    G  + +
Sbjct: 131 AIPGGTLEAATVTGMGRLMMFRRIIVPQALRTALPGMGNQWQSVIKESALVSVTGLVETM 190

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   T  N T  +     +   IYL ++    +    +       +++
Sbjct: 191 NQVSTAANSTQMSFFFYSVGAVIYLIITTCSDMVFRYVEKFAMRGQQR 238



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 39/91 (42%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           D  +   +L     T  ++    +   ++G+++   +++ ++    +   Y+ +FR +P 
Sbjct: 14  DEGWGGVLLNAAAVTVSVSLCAWLLGALLGSMLCWMQIAGSRWQQRLAAGYITLFRGVPE 73

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           L+VI+  Y     V+     ++       +N
Sbjct: 74  LLVIYLFYFGGRQVVSAVGTALGFQGPFDVN 104


>gi|146338610|ref|YP_001203658.1| ABC transporter permease/ATP-binding protein [Bradyrhizobium sp.
           ORS278]
 gi|146191416|emb|CAL75421.1| Putative ABC transporter (ATP-binding/permease protein)
           [Bradyrhizobium sp. ORS278]
          Length = 542

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 6/171 (3%)

Query: 232 LPTLVLIALKYQLHF-DKPVLGQFNFIGGSTVSPEF-----MSLYIALSCYTAAFIAEIV 285
              L  IA  Y + F   P++ Q  F   +           ++  +AL+C  A FIAE++
Sbjct: 46  FWLLAAIARGYTVIFRGTPLILQMVFAYDALPHIGIKLPAVLAAGLALACNEAPFIAEML 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG++ V RGQ+ A  ALG+T     R ++ PQA+R++IP   ++ ++ LKNSSLA  + 
Sbjct: 106 RSGVLGVDRGQLLAGQALGMTPGVLMRRIIAPQAIRTMIPAFGNEAVSALKNSSLASVIA 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L      + + T     I      +YL L+  I++    L   + L  
Sbjct: 166 VQELTLRSTQLASSTFDFFSIFFASGLLYLGLTGAISVIQLALEWMLDLDR 216



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 3/131 (2%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            ++ G   T  +   G+I   ++G ++ A +LS   L+A I R Y  +FR  P ++ + F
Sbjct: 12  YLIQGIELTLQVTALGLIGGLVLGLILAAMQLSRFWLLAAIARGYTVIFRGTPLILQMVF 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM---DTNAKIFVFSFVLGIVLSLFA 204
            Y ++  +       +     +  N        L       +    +    LG+   +  
Sbjct: 72  AYDALPHIGIKLPAVLAAGLALACNEAPFIAEMLRSGVLGVDRGQLLAGQALGMTPGVLM 131

Query: 205 TRLSRHFHEKT 215
            R+      +T
Sbjct: 132 RRIIAPQAIRT 142


>gi|259502845|ref|ZP_05745747.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|312870480|ref|ZP_07730600.1| arginine ABC transporter, permease protein ArtQ [Lactobacillus oris
           PB013-T2-3]
 gi|259169212|gb|EEW53707.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus antri DSM 16041]
 gi|311094037|gb|EFQ52361.1| arginine ABC transporter, permease protein ArtQ [Lactobacillus oris
           PB013-T2-3]
          Length = 213

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 19/210 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + S  LGI++SL      R           +L I  +L+ G P L+ +   + 
Sbjct: 20  QIFFWTLIGSLPLGILVSLGLISKIRPLKW-------ILEIYVWLMRGTPLLLQLIFVF- 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++          V   + +  +A     AA+ AEI R G  A+  GQ EAA  L
Sbjct: 72  --YGLPII--------GIVFQRYDAALVAFILNYAAYFAEIFRGGFQAIDEGQFEAARVL 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            L++ +  R +++PQ ++ +IP + ++ +NL+K+SSL   +G  DL+  G    ++    
Sbjct: 122 RLSYWQTLRKIVIPQVVKIVIPSIGNEVINLVKDSSLVYVIGLGDLLRAGNVATSRD-VT 180

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  +L+   IYL L  +  L + ++  + A
Sbjct: 181 LLPLLLVGLIYLILVGICTLILRKVEQRYA 210



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           SS   ++  G   T  + F  +I +  +G LV  G +S  + + WI  +YV + R  P L
Sbjct: 5   SSILPSLFQGASLTLQIFFWTLIGSLPLGILVSLGLISKIRPLKWILEIYVWLMRGTPLL 64

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + + F++  +  +  +            LN              A 
Sbjct: 65  LQLIFVFYGLPIIGIVFQRYDAALVAFILNYAAYFAEIFRGGFQAI 110


>gi|229829990|ref|ZP_04456059.1| hypothetical protein GCWU000342_02096 [Shuttleworthia satelles DSM
           14600]
 gi|229791288|gb|EEP27402.1| hypothetical protein GCWU000342_02096 [Shuttleworthia satelles DSM
           14600]
          Length = 216

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 97/212 (45%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 VFS  LG++++      +   H        +L I   ++ G P ++ + + Y  
Sbjct: 20  IFLLTLVFSLPLGMLVAFGYMSKNPILHW-------ILKIYISIMRGTPLMLQLIVVYFG 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +    +   +   G        ++ IA +   AA+ AEI RSG+ ++P GQ EAA  LG
Sbjct: 73  PYYIFGIQISSAYRG-------TAVIIAFALNYAAYFAEIYRSGIESMPAGQYEAARVLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +    ++LPQ ++ I+P +T++ + L+K++SLA ++ +A++ +    +       +
Sbjct: 126 YSGSQTFFKIILPQVIKRILPSVTNEVITLVKDTSLAFSIAYAEMFTQAKALAASAHNVL 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++     Y   + ++A  M  +   +   +
Sbjct: 186 P-LIAAGIFYYVFNFIVAEIMALIEKSMRYYD 216



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 31/60 (51%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +    ++ +  +G LV  G +S N ++ WI ++Y+ + R  P ++ +  +Y  
Sbjct: 13  GMLTTVEIFLLTLVFSLPLGMLVAFGYMSKNPILHWILKIYISIMRGTPLMLQLIVVYFG 72


>gi|322373222|ref|ZP_08047758.1| ABC-type amino acid transport system permease component
           [Streptococcus sp. C150]
 gi|321278264|gb|EFX55333.1| ABC-type amino acid transport system permease component
           [Streptococcus sp. C150]
          Length = 228

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 1/209 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +LF   L + +  +  K   ++Y++         L+L      
Sbjct: 18  PVTLGIMVVAILLSFLPALFL-ALGQIYQVRGVKTFSVIYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                     +I  S  T   ++EI+RS L+ V +GQ+EAA A+
Sbjct: 77  PSLLNQFFKGIGSHVDVFKVNPLYYAFIIYSLMTTGSLSEIIRSALLTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT R+A   ++ PQA+++ +P L +  +N++K +SL   +   D+ ++         Q 
Sbjct: 137 GLTTRQAYLRIVFPQALKAALPNLCNLVINIVKGTSLVFVMTIKDITAIARVEAAYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E   +   +YL +  +I +  N    K+
Sbjct: 197 FESYFVIFILYLIICGIIQVLFNLGERKL 225


>gi|307150942|ref|YP_003886326.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7822]
 gi|306981170|gb|ADN13051.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7822]
          Length = 398

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 23/261 (8%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
             F   K    +  +      L    FL    L    L +   +   +  F+L IV+++ 
Sbjct: 146 TAFSGKKIGQQIPSLSSWLSPLWLLTFLVIWWLLRGGLFLQPVSLSLISGFILTIVVAIV 205

Query: 204 ----------ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
                        L R       + L + YI          L LI + +      P++  
Sbjct: 206 SIFLCFPFGVLLALGRQSSLPVIRWLSIGYIEIIR-----GLPLIGILFMAQVMLPLVLP 260

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                 S V           + ++AA++AE +R GL +VPRGQ EAAIALGL       L
Sbjct: 261 LGVRPDSIVR-----AIAGYTIFSAAYLAENIRGGLQSVPRGQTEAAIALGLNPLLVLGL 315

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIW 370
           ++LPQA++++IP +  Q+++L K++SL   VG  DL+ +  +I+      G+ +E+ L  
Sbjct: 316 IILPQALKAVIPTIVGQFISLFKDTSLLAIVGLVDLLGISQSILANPKYQGRNVEVYLFI 375

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
            FIY      ++L   +L  K
Sbjct: 376 AFIYWLCCSAMSLASRKLEQK 396


>gi|49474412|ref|YP_032454.1| amino acid permease [Bartonella quintana str. Toulouse]
 gi|49239916|emb|CAF26314.1| Amino acid permease [Bartonella quintana str. Toulouse]
          Length = 250

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+  +    + +   GI++    T  +        +A+  +++   ++  +P L
Sbjct: 34  LDGFKNTVILSVSSLILAVFFGIIIGTMRTLPNTSIIRCLLRAIGGIWVE--IMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +      + +  AL  +T+A IAE VRSG+ A+P G
Sbjct: 92  VQVFLWY---FVVPKVYPL-----AMNFSPILLVTCALGFFTSARIAEQVRSGIEAIPSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G T  +  R ++LP+A+R I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFTTYQTYRYIILPRALRMIMPPLTSEAMGIVKNSSIAFAVSIYELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  LI   +Y+ +++ I + M  +   + +
Sbjct: 204 TIEEVSHVYENYLIVTILYIFIALCIFIIMTIIEKMLKI 242



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRVYVEVF 136
             +Y   +L GF NT  L+ S +I A   G ++G  R   N      L+  I  ++VE+ 
Sbjct: 26  SHTYLDTLLDGFKNTVILSVSSLILAVFFGIIIGTMRTLPNTSIIRCLLRAIGGIWVEIM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLP 157
           RNIP LV +F  Y  V  V P
Sbjct: 86  RNIPLLVQVFLWYFVVPKVYP 106


>gi|323529852|ref|YP_004232004.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386854|gb|ADX58944.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 240

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 2/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G          ++    +  + +  +Y + F       LV+    +  
Sbjct: 24  MTVALTLAALAVGAGFGALVAA-AKLSRLRALRVVGDIYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ RS ++AV RG++EAA ++G
Sbjct: 82  STLVTTVGQWFGAEGFVGVPPFVIGALAVGMISGAYQAEVYRSAVLAVSRGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MPTLTMARRILIPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAAGSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++   +YL ++ +     N   A++    K+
Sbjct: 202 TFFVVGGALYLLMTSISNRVFNHAEARVGRSFKR 235



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L+  + T  L  + +      G LV A +LS  + +  +  +Y  VFR +P L+V
Sbjct: 14  WGGVLLLAALMTVALTLAALAVGAGFGALVAAAKLSRLRALRVVGDIYTTVFRGVPELLV 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           I+  Y    +++            + +    +
Sbjct: 74  IYLFYFGGSTLVTTVGQWFGAEGFVGVPPFVI 105


>gi|324324591|gb|ADY19851.1| amino acid ABC transporter, permease protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 217

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 12/185 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R       + +   YI  FL   +P LV + L +   F  P       I         
Sbjct: 43  IIRTSKITILRFISRTYIELFL--SIPILVWLFLFF---FGLP-------IALGIDVSST 90

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           ++   ALS +    I EIVR  L ++P+GQ+EA  ++G+  ++  + VL+PQA+R +IP 
Sbjct: 91  VAAITALSLWGITEIGEIVRGALQSLPKGQVEAGKSIGMNKKQLYQYVLIPQAIRRMIPA 150

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             + ++ +++ +SL V +G  +++  G  I+ +TG+A  I       Y  L   ++++  
Sbjct: 151 TINIFIRIIQTTSLTVLIGVTEVIKAGQQIVERTGEAFLIYGCLFIFYFLLCYPLSVWSR 210

Query: 387 RLNAK 391
           +L  +
Sbjct: 211 KLETR 215



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   +I +TI G L G  R S   ++ +I R Y+E+F +IP LV +F  
Sbjct: 16  LLKGLEQTLLIACFTIIISTIGGILFGIIRTSKITILRFISRTYIELFLSIPILVWLFLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|310816974|ref|YP_003964938.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Ketogulonicigenium vulgare Y25]
 gi|308755709|gb|ADO43638.1| glutamate/glutamine/aspartate/asparagine transport system
           permeaseprotein BztC [Ketogulonicigenium vulgare Y25]
          Length = 457

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 18/214 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V S  LGI+L+L      R  +      L + +I   +I G+P +V +        
Sbjct: 259 ISGIVLSLPLGILLAL-----GRKSNMFIINKLSVAFIE--IIRGVPLIVWLF------- 304

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L    F+   +     + + I ++ ++AA+IAE+VR GL A+P+GQ EAA ALGL 
Sbjct: 305 -TASLLLNYFLPPGSNFDLMLRVIIMVTLFSAAYIAEVVRGGLAAIPKGQYEAADALGLD 363

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQA 363
           + +A RL++LPQA++  IP + + ++ L K+++L V +G  D V++  +I   T   G  
Sbjct: 364 YWRAMRLIILPQALKISIPGIVNTFIGLFKDTTLVVFIGMMDPVNLLNSIRANTAWNGIY 423

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E+ L    ++  +   ++ +   L  ++  + +
Sbjct: 424 WELFLFVGLMFFVVCFSMSRYSIYLEKRLRREHR 457



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 60/144 (41%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R   I   +   ++  + FL     + N +  S   LG  F    A   I +  +P   
Sbjct: 180 PRYGAILGIVAAVVVGLLFFLNPFAMIANRLGISGNPLGFAFPIVGALTRIGEIALPGVG 239

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
               A+  + GF  +F +  SG++ +  +G L+  GR S   ++  +   ++E+ R +P 
Sbjct: 240 LPGVASRDIGGFTLSFIIGISGIVLSLPLGILLALGRKSNMFIINKLSVAFIEIIRGVPL 299

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVL 165
           +V +F     +   LP   +  ++
Sbjct: 300 IVWLFTASLLLNYFLPPGSNFDLM 323


>gi|33240124|ref|NP_875066.1| ABC-type amino acid transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33237651|gb|AAP99718.1| ABC-type amino acid transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 339

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 68/271 (25%), Positives = 124/271 (45%), Gaps = 12/271 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FV 195
           R  P L ++  +  + L++       I         +       L       + + S + 
Sbjct: 69  RWRPALWIVLIIILTALTLCESKWRWIGKSLPFAWISITPIGIYLLAGGLGLLPIASRYW 128

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI------ALKYQLHFDKP 249
            G+ L++  T  S  F    G AL L   S   I    + + I       L   L F + 
Sbjct: 129 GGLTLTILLTASSALFSLPLGVALALGRQSKLSIIKKISSIYIDAMRSVPLISVLFFGQL 188

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           ++  F  +G            IA + + +A+IAE +R GL A+P  Q+EA  A+GL + +
Sbjct: 189 LIPLFLPVG--IEISRVWRAAIAFTLFVSAYIAEDIRGGLQAIPNTQIEAGKAIGLNNIQ 246

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEI 366
            T+ ++LPQA+R  +P LT+Q + LL+N+SL   +G  +L+ +G +++      G+ IE+
Sbjct: 247 ITQFIVLPQALRIALPALTNQAIGLLQNTSLMAILGLVELLGIGRSLLANPEFIGRYIEV 306

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +    IY  + +++AL    L  K+++  +
Sbjct: 307 YVWLAAIYWLVCMIMALLARNLEQKLSINRR 337


>gi|328950980|ref|YP_004368315.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
 gi|328451304|gb|AEB12205.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinithermus hydrothermalis DSM 14884]
          Length = 376

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 18/230 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N        LT+       V SF LG++L+L      R       + L  LYI T    
Sbjct: 162 VNTNLWGGLLLTLLITLLTVVLSFPLGLLLAL-----GRTSRLPAIRILATLYIETVRGV 216

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L +++ +A                F+  +   P+ + +    + + AA++AE +R GL 
Sbjct: 217 PLVSVLFLAWI----------MVPLFVPEAWRPPQLVRVIAGFTLFAAAYLAEYIRGGLQ 266

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP+GQ EAA ALGL   +    ++LPQA+RS+IP L  Q + + K++SL   VG  DL+
Sbjct: 267 GVPKGQYEAAWALGLNGFQTAYYIILPQAIRSVIPALIGQVIAIFKDTSLVAIVGLLDLL 326

Query: 351 SVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  +++   N  G   E+ L  + +Y   + +++    +L   + L  +
Sbjct: 327 GIAQSVLANPNYLGLEREVYLFLLVVYFIGAGLMSYASRQLERAMGLGTR 376


>gi|320324764|gb|EFW80838.1| amino acid ABC transporter protein, permease protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320328871|gb|EFW84870.1| amino acid ABC transporter protein, permease protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330890404|gb|EGH23065.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. mori str. 301020]
          Length = 216

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y L F  P+             P   +  I L CY AA+IAE  R  +  +P GQ
Sbjct: 67  LMVQLYVLFFALPL--------AGITFPAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL  +     R ++LPQA++ ++P L +  + + K + L   +   +L      I
Sbjct: 119 WEAARALDFSRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQI 178

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T +  E   +   ++L++S+  +L    L  +
Sbjct: 179 AGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 213


>gi|261823406|ref|YP_003261512.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261607419|gb|ACX89905.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 369

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 108/235 (45%), Gaps = 14/235 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+F  +   S     +     +F  + V+G+ +S+    L R       + L +++I
Sbjct: 139 MSGGLFGLSYVPSSEWGGLPLTILLFSGTVVIGMPVSILL-ALGRRSPLPFLRGLSVVFI 197

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L T++ +A          V     F+       + + + I ++ + A + AE+
Sbjct: 198 EGLRGVPLITILFVA----------VNVFPLFLPAGMEINKLLRIIIGIALFFACYQAEV 247

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL +VPRGQ EAA+AL L++   T  ++LPQA+R  +P +T+  +  +KN+S  + +
Sbjct: 248 IRGGLQSVPRGQYEAAMALNLSYWHTTTKIILPQALRICLPAMTNHIIAAMKNTSFVIII 307

Query: 345 GFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D+++   +++         IE  +    IYL    +++ +   +  +I    
Sbjct: 308 GLFDILTATSSVMQDPLWRRYYIETYIFISAIYLLFGFLLSRYALWVEKRIDASR 362



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   S +      G   T  L    ++    +  L+  GR S    +  +  V++E  
Sbjct: 146 LSYVPSSEWG-----GLPLTILLFSGTVVIGMPVSILLALGRRSPLPFLRGLSVVFIEGL 200

Query: 137 RNIPPLVVIFFLYKSVLSVLP 157
           R +P + ++F         LP
Sbjct: 201 RGVPLITILFVAVNVFPLFLP 221


>gi|171321441|ref|ZP_02910389.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171093287|gb|EDT38487.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 237

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 83/205 (40%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIALGFALAVPL-AIARASSNRWISGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A      A+  EI    + A   G++EA +A G++
Sbjct: 84  SLQVVHNHVLLD-AFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEIEAGMAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    ++LP A+R  +P  +++ + +L  ++LA      D++ V   + + T  + + 
Sbjct: 143 RFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +Y  +   +     +L  +
Sbjct: 203 YGIAAVLYAIVVFTLIWAFRKLETR 227



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 64/218 (29%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y      G   T WL    +     +   +   R S+N+ ++    +
Sbjct: 5   ISQYWQNYLYTDGYR---FSGLAITLWLLVVSIALGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + +H ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHNHVLLDAFFRNAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSAGEIEAGMAYGMSRFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y       I 
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAIVVFTLIW 219


>gi|209547536|ref|YP_002279454.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538780|gb|ACI58714.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 220

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R   F    +  +  + V S ++G V+ L     +     +       +Y++      +
Sbjct: 11  WRNFDFLLSGLALSLGLAVISILIGAVIGLVV-AFALTSKNRLAVVPARVYVTVIRNLPI 69

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LVL A              F          +  S  + LS Y+ A++AE+ R+GL+++
Sbjct: 70  LVLVLFAF-------------FALPQMGLRLDKIKSFVLVLSLYSGAYLAEVFRAGLLSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K++SLA A+   +L   
Sbjct: 117 PKGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  ++   +Y++   +IA  M  +  ++AL  
Sbjct: 177 ARKINVESFRVIETWMVTSALYVATCFLIAAVMRFVERRLALPR 220


>gi|290473964|ref|YP_003466838.1| arginine ABC transporter membrane protein [Xenorhabdus bovienii
           SS-2004]
 gi|289173271|emb|CBJ80046.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus
           bovienii SS-2004]
          Length = 222

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 96/228 (42%), Gaps = 10/228 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     ++       + +F+L +VL+                 L   YI+ F   
Sbjct: 4   YIKDILPGLQTSLSLTVTALLAAFILSVVLTFIL-----TMRLPILSQLVKGYITLFT-- 56

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y      P + ++ ++      P ++   + L+  +AA+  ++    + 
Sbjct: 57  GTPLLVQFFLIYYGPGQFPSIKEYPWLWQLMSEP-WLCAMVTLALNSAAYSTQLFYGAVR 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ ++  ALG++   +   +LLP A +  +   +++ + + K++SLA  +   D++
Sbjct: 116 AIPTGQWQSCQALGMSKTHSM-RILLPYAFKRALSSYSNEVVLIFKSTSLASTITLLDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                   ++   + + +    IYL ++ ++ L M  +  +    E++
Sbjct: 175 GYSQLQFGRSYD-VTVFVAAGVIYLCVNALLTLLMRIIERRALSFEQR 221



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 39/114 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   +  L  + ++ A I+  ++         +++ + + Y+ +F   P LV 
Sbjct: 4   YIKDILPGLQTSLSLTVTALLAAFILSVVLTFILTMRLPILSQLVKGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            F +Y        I ++  +           +    L     +    +  V  I
Sbjct: 64  FFLIYYGPGQFPSIKEYPWLWQLMSEPWLCAMVTLALNSAAYSTQLFYGAVRAI 117


>gi|330718492|ref|ZP_08313092.1| ABC-type amino acid transport system, permease component
           [Leuconostoc fallax KCTC 3537]
          Length = 220

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 101/210 (48%), Gaps = 19/210 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +    V SFV+G +L +       +F    G           +I  +  L L+ + +  
Sbjct: 29  VSVVSIVLSFVIGSILGVIRYEKIPYFSRFVG----------LIIDIVRNLPLLLIIFFT 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P                  S  IA++ + +  +AEI+R GL ++  GQ E A + G
Sbjct: 79  YFALP--------RFGVHLSILTSAIIAMTAFESMMVAEIIRGGLKSIDFGQTEGARSTG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +++ +    ++LPQA +++IPPL SQ+++L+K++SLA A+   +L+     +  Q    +
Sbjct: 131 MSNAQTMWHIILPQAYKTMIPPLISQFISLVKDTSLATAIVLPELMYRAQIVYGQDNTYM 190

Query: 365 -EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I+L+   +Y  ++  ++L     ++K+A
Sbjct: 191 VPILLLIAAMYFVVNYGLSLLAKWFDSKLA 220



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 35/73 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  ++   ++ + +IG+++G  R       +    + +++ RN+P L++I
Sbjct: 16  LKYLLGGLGITILVSVVSIVLSFVIGSILGVIRYEKIPYFSRFVGLIIDIVRNLPLLLII 75

Query: 146 FFLYKSVLSVLPI 158
           FF Y ++      
Sbjct: 76  FFTYFALPRFGVH 88


>gi|296388586|ref|ZP_06878061.1| histidine transport system permease HisM [Pseudomonas aeruginosa
           PAb1]
          Length = 237

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 88/228 (38%), Gaps = 4/228 (1%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           VL                 +     + + +  LG +L++    ++R       +    LY
Sbjct: 4   VLDEYWQAYLWTDGLQLTGLAMTLWLLILAVALGFLLAIPL-AVARTCGNPLLRYPVWLY 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T++  G P  + +   Y   +    +   +F+  +     F    +A    T A++ E
Sbjct: 63  --TYVFRGTPLYIQLLFFYTGVYSLNAIRAQDFL-NAFFRDGFNCTVLAFVLNTCAYMTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    +   P G++EAA A G+      R ++LP A+R  +P  +++ + +L ++S+A  
Sbjct: 120 IFAGAIRNTPHGEVEAARAYGMGSFTLYRRIVLPSALRRALPYFSNEVILMLHSTSVAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               DL+ V   + + T        I   +Y   + ++     R   +
Sbjct: 180 ATVPDLLKVARDVNSATYAPFLSFGIAGALYAGTAFLLIWLFRRGELR 227



 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    +    ++   +   R   N L+ +   +Y  VFR  P  + + F Y
Sbjct: 20  LTGLAMTLWLLILAVALGFLLAIPLAVARTCGNPLLRYPVWLYTYVFRGTPLYIQLLFFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             V S+  I     +  F 
Sbjct: 80  TGVYSLNAIRAQDFLNAFF 98


>gi|307729014|ref|YP_003906238.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307583549|gb|ADN56947.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 245

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G V  +      R       +AL   Y+S F   G+P +V   + + +  +       +
Sbjct: 47  IGTVFGVM-----RTLPNGGARALSAAYVSMF--RGVPLIVQFFIWFFVVPELLPGRAGD 99

Query: 256 FIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           ++       +F+ +  ++L  YT + I E VR+G+ A P GQ  AA ALGLT  +A R V
Sbjct: 100 WLKSLPSHAQFLIASVVSLGVYTGSRICEQVRAGIQARPVGQFHAAFALGLTRAQAYRHV 159

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           LLP   R+I+ PLTS++L + KNS++A  +G  +L      +++ T Q  E  +     Y
Sbjct: 160 LLPVTFRTILGPLTSEFLIISKNSAVASTIGLLELSGEARQLVDYTAQPYESFICVTLAY 219

Query: 375 LSLSIMIALFMNRLNAKIAL 394
           + L+  I   M  +  + AL
Sbjct: 220 VGLNFAILRGMRWVRRRTAL 239



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 34/83 (40%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
             ++Y   +L G VNT  L       A  IGT+ G  R   N     +   YV +FR +P
Sbjct: 18  EAATYFDWLLSGLVNTVELTLLAFALALAIGTVFGVMRTLPNGGARALSAAYVSMFRGVP 77

Query: 141 PLVVIFFLYKSVLSVLPIPDHSI 163
            +V  F  +  V  +LP      
Sbjct: 78  LIVQFFIWFFVVPELLPGRAGDW 100


>gi|76574839|gb|ABA47313.1| ABC-type amino acid transport system, permease component
           [Pseudomonas cichorii]
          Length = 246

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 14/239 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            + L FG  L  + L           ++ +   ++   L      L+R    +       
Sbjct: 1   MLHLMFGELLGPQYLHLLFDGFLLTLRLSILVCLIATALGFLVC-LARISSSRLWSWPAR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQ---------LHFDKPVLGQFNFIGGSTVSP--EFMSLY 270
            Y+S F     P LV +   Y          L     +  + N  G     P  EF++ +
Sbjct: 60  GYLSLF--RNTPLLVQLFFWYFGVSALLPEELVSWLNMPHEINLAGLLIEWPSFEFIAGF 117

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             L+ Y++AFIAE  R+G+ +V   Q  A  ALGL   +  R V+LPQA+R+ + PL  Q
Sbjct: 118 WGLTLYSSAFIAEEFRAGVASVRPQQRTAGQALGLRPAQVWRYVVLPQAVRTALGPLLGQ 177

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Y+N+LKNSSL +A+G A+L      +  +T +A +   I   +Y+    +I      + 
Sbjct: 178 YMNVLKNSSLTMAIGLAELSYASRQVETETFKAFQAFGIATLLYIVSIALIEAIGQMIQ 236



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 4/173 (2%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   +  GF+ T  L+    + AT +G LV   R+S+++L +W  R Y+ +FRN P 
Sbjct: 11  GPQYLHLLFDGFLLTLRLSILVCLIATALGFLVCLARISSSRLWSWPARGYLSLFRNTPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV +FF Y  V ++LP    S  L     +N  GL     + +  A  +  +      ++
Sbjct: 71  LVQLFFWYFGVSALLPEELVSW-LNMPHEINLAGLLIEWPSFEFIAGFWGLTLYSSAFIA 129

Query: 202 ---LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
                     R      G+AL L     +    LP  V  AL   L     VL
Sbjct: 130 EEFRAGVASVRPQQRTAGQALGLRPAQVWRYVVLPQAVRTALGPLLGQYMNVL 182


>gi|222082456|ref|YP_002541821.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727135|gb|ACM30224.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 213

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 18/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+  +    +  F + I+LS       RH             I      G+P L
Sbjct: 10  LQASIYTVTISVVSILIGFAIAILLSGMLLSQRRHLMLPA-------QIFISFFRGVPLL 62

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y L                   P  ++  I LS  TAA+ AE +R G  +VP G
Sbjct: 63  VQLLLIYNL-----------LPVIGINVPSIVAAIIGLSLCTAAYQAENLRGGFASVPTG 111

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
            +E+A  +GL+ R+  R + +P A+R   P L ++ + +LK SSL   VG  +L  +   
Sbjct: 112 LVESAEMVGLSPRQIFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELTRMAQD 171

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   T   +++      IYL+++ ++AL  + +  ++
Sbjct: 172 LAGSTFLPLQLFASAGLIYLAINWIVALAGSLIERRL 208


>gi|209516855|ref|ZP_03265705.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502671|gb|EEA02677.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 242

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 2/176 (1%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             +   +    +  PLL    F  FG  TL+       L+   PV      I   +   E
Sbjct: 50  ARAAALYVLAFRNSPLLVQLLFWYFGAATLLPQPWMEWLNASHPVSLWGCTIAWPSF--E 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++ ++ L+CY+ AFI E  R+G+  V   Q +AA ALGLT   A R V+LPQA+R   P
Sbjct: 108 FVAGWVGLTCYSTAFIGEEFRAGMRGVKETQHQAAAALGLTPLAAFRYVILPQAIRIATP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           PL  QY+NL+KNSSLA+ +G A+L  V   +  +T +  +       +Y+ +   I
Sbjct: 168 PLAGQYMNLVKNSSLAMTIGLAELSYVSRQVDTETFKTFQAFGAATVLYIVIIAFI 223



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 36/79 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  GF+ T  L+      AT+ G  +   R + N ++A    +YV  FRN P LV 
Sbjct: 9   YLGWIAHGFLMTLVLSACAGAAATLAGFGLALARNARNGMLARAAALYVLAFRNSPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y    ++LP P    
Sbjct: 69  LLFWYFGAATLLPQPWMEW 87


>gi|293606724|ref|ZP_06689077.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
 gi|292814874|gb|EFF74002.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Achromobacter piechaudii ATCC 43553]
          Length = 229

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 12/218 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F         KI   + + G +L      + R +H +    L  LYI   ++ G P L
Sbjct: 13  LPFLLKGFWVTLKISFVAIIAGSLLGFVIGVI-RSYHIRGIHQLLGLYI--HILRGTPFL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y  +F  P  G               + +++LS YT+ +++EIV   + +VPRG
Sbjct: 70  VQL---YIFYFVLPSTGI-----ELLHWDSGTAAFVSLSVYTSCYVSEIVMGAIQSVPRG 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A+ LGL   +  RLV+LPQAMR I+ P++  Y+ L+K++++   VG  +L   G  
Sbjct: 122 QTEGAMTLGLRPLQILRLVVLPQAMRLIVQPMSGVYVMLIKSTAILSVVGITELTRQGEV 181

Query: 356 -IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            II    +++ I  +   IY      +    N L  ++
Sbjct: 182 FIITFPAKSLFIYGMIAAIYFIYCYPLLRLANWLEKRL 219



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 35/76 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  ++F  +I  +++G ++G  R    + +  +  +Y+ + R  P LV ++  
Sbjct: 16  LLKGFWVTLKISFVAIIAGSLLGFVIGVIRSYHIRGIHQLLGLYIHILRGTPFLVQLYIF 75

Query: 149 YKSVLSVLPIPDHSIV 164
           Y  + S      H   
Sbjct: 76  YFVLPSTGIELLHWDS 91


>gi|257440785|ref|ZP_05616540.1| amino acid ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
 gi|257196759|gb|EEU95043.1| amino acid ABC transporter, permease protein [Faecalibacterium
           prausnitzii A2-165]
          Length = 212

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 13/197 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG+V+S  +    +           L+    ++I G P ++ I + Y      P L   N
Sbjct: 24  LGLVVSFGSMSRCKPLAG-------LVKTFVWIIRGTPLMLQIIVIY----LGPGLLGMN 72

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               S      ++  +A +   A + +EI R G+ AVP+GQ EA   LG+T  +    V 
Sbjct: 73  NPWPSGSGGRMVAAVVAFAINYACYFSEIYRGGIEAVPKGQTEAGQVLGMTKTQIFFKVT 132

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L Q ++ I+PP+ ++ + L+K++SLA  +   +++ +      +    I  +      +L
Sbjct: 133 LLQVVKRILPPMGNEIITLVKDTSLANTIANKEIIMMAKEYSAK--GLIWPLFSTALFFL 190

Query: 376 SLSIMIALFMNRLNAKI 392
                + +  N    K+
Sbjct: 191 VFVGALTILFNWAEKKL 207


>gi|330969959|gb|EGH70025.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 216

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y L F  P+             P   +  I L CY AA+IAE  R  +  +P GQ
Sbjct: 67  LMVQLYVLFFALPL--------AGITFPAVTTGVIGLGCYYAAYIAEAYRGAIDDIPAGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL        R ++LPQA++ ++P L +  + + K + L   +   +L      I
Sbjct: 119 WEAARALDFNRSDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQI 178

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T +  E   +   ++L++S+  +L    L  +
Sbjct: 179 AGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 213


>gi|302339788|ref|YP_003804994.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636973|gb|ADK82400.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 357

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 106/225 (47%), Gaps = 18/225 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++       TLT+  ++   ++SF +GI L+L      R       + L + YI  F   
Sbjct: 138 VSTNDWGGLTLTLILSSLGLLYSFPIGIALAL-----GRRSSWPVIRGLSVAYIEFFRGI 192

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L T++ +A      F  P +             + + + + ++C+ +A++AE++R GL 
Sbjct: 193 PLITILFMASVVVPFFLPPQIS----------VDKIIRIIVGMTCFQSAYLAEVIRGGLQ 242

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EA+ +LG        L++LPQ ++  +  +    ++ LK+++L + +G  DL+
Sbjct: 243 SIPKGQYEASDSLGFGFSLQQYLIILPQVLKVTVANIGGISISFLKDTTLVLIIGMFDLL 302

Query: 351 SVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   + + +   G   E  L    IY  +   I+   NR+  K+
Sbjct: 303 GMVSPLASDSNWLGMEPEGYLFAGLIYWLICFTISRITNRIEEKV 347


>gi|262368885|ref|ZP_06062214.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
 gi|262316563|gb|EEY97601.1| ABC glutamate/aspartate transporter [Acinetobacter johnsonii SH046]
          Length = 227

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 104/229 (45%), Gaps = 2/229 (0%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              +      L      +     I +   ++  +  +F   L       + + L L+   
Sbjct: 1   MEWLTAFTHDLQLSAPALWHGLSITLKVVIIATIGGIFIGTLLALMRLSSIRILNLIAQG 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              +F    L+L+ + +  +F  P +         T+    +S  +A   + AA+ +EIV
Sbjct: 61  YVNLFRSIPLLLVLMWF--YFAVPFIYTTVTGNYLTIDTALVSSIVAFMLFEAAYFSEIV 118

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ ++P+GQ  AA ALG+T+ ++ RL++LPQA R + P L  Q + L ++S++  A+G
Sbjct: 119 RAGIQSIPKGQSAAAYALGMTYGQSMRLIILPQAFRKMTPLLLQQTIILFQDSTMVYAIG 178

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             D         +      + IL    +Y ++S++    + RL  ++++
Sbjct: 179 LLDFFRTNYVRGDLMSLLTQYILFAGLVYFTISMLATYAVKRLQRRLSV 227



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 37/69 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G   T  +     I    IGTL+   RLS+ +++  I + YV +FR+IP L+V+ +
Sbjct: 17  ALWHGLSITLKVVIIATIGGIFIGTLLALMRLSSIRILNLIAQGYVNLFRSIPLLLVLMW 76

Query: 148 LYKSVLSVL 156
            Y +V  + 
Sbjct: 77  FYFAVPFIY 85


>gi|256391966|ref|YP_003113530.1| polar amino acid ABC transporter inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
 gi|256358192|gb|ACU71689.1| polar amino acid ABC transporter, inner membrane subunit
           [Catenulispora acidiphila DSM 44928]
          Length = 258

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 11/229 (4%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
                L + +F ++         ++    +     +L + L +   R ++       +  
Sbjct: 27  FRESFLSWSVFRSSMPDILRGFWLNIQIFMVAEPIILILGLGVALIRTTKSPGLLPFRLT 86

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             LY   F   G+PTL+LI +   + F  P L         T     +   +AL+    A
Sbjct: 87  ATLYADVF--RGVPTLLLILV---VGFGIPALQL-----SGTPKDPVVLGVVALTLSYVA 136

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++E+ R+GL +V   Q  AA ALGL+ R+  R V+LPQA+R+++PPL + +  L K+++
Sbjct: 137 YVSEVFRAGLDSVHPSQRAAATALGLSERQTLRFVVLPQAIRNVVPPLLNDFSALQKDTA 196

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           L   +G  + +       + T       +    +++++++ +A + +RL
Sbjct: 197 LVSTLGVVESLRQAQIHESLTFNYTP-YVGAALLFIAVTVPLARYTDRL 244


>gi|218458510|ref|ZP_03498601.1| amino acid ABC transporter permease [Rhizobium etli Kim 5]
          Length = 229

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 5/232 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                 +               + V S   G ++++     ++    +  + L   Y + 
Sbjct: 1   MSFTWISSYWPLLLTGAWQTVSLLVISVTFGFIIAIGL-AFAQVSGGRLTRLLARGYCTF 59

Query: 227 FLIFGLPTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F   G P L+ +  L Y +    P++      +    +   F    ++ +   AA+ AE+
Sbjct: 60  F--RGTPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEV 117

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L+AVP+G++EA  A GL+  K TR + LP+A+R  +P +  + +  LK + LA  V
Sbjct: 118 LRGALLAVPKGELEAGRAFGLSPWKLTRRIWLPRAIRIALPTIAGEIVMQLKATPLAFTV 177

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              DL +V   +   T    E +L+    YL+L+ +IA     L A++ ++ 
Sbjct: 178 TVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAQVPVRR 229



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 40/110 (36%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  SSY   +L G   T  L    +    II   +   ++S  +L   + R Y   FR 
Sbjct: 3   FTWISSYWPLLLTGAWQTVSLLVISVTFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P L+ ++ LY  V S+LP+        F   L               A 
Sbjct: 63  TPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAA 112


>gi|182441008|dbj|BAG24133.1| probable amino acid permease [Pseudomonas cichorii]
          Length = 228

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 102/204 (50%), Gaps = 13/204 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-----YISTFLIFGLPTLVLIALKYQLH 245
           +    L ++LSL +  L+       G AL L+     ++   ++     + ++ L +  +
Sbjct: 23  LGGAALTLILSLLSGVLAAALGLILGVALVLVRGRTRWVLLAVLGFFRAIPVVMLIFWTY 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L + +        P   ++  ALS    A++A  V SG+I++  GQ  AA ALG+
Sbjct: 83  FLLPILFKIDV-------PALFTVVCALSLIGGAYLAHSVHSGIISLSSGQWAAAKALGM 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           +  +  RL++LPQA+  ++P   +Q+++L+K++SLA  +G  +L  V   + N+      
Sbjct: 136 SSWQVLRLIILPQALPIMLPSFLNQWISLIKDTSLAYVIGVGELSFVATQVSNRVMVYPT 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRL 388
           EI L    +Y  +   + L  +RL
Sbjct: 196 EIFLFIALVYFIICSALDLIASRL 219


>gi|77456454|ref|YP_345959.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380457|gb|ABA71970.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 209

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 13/218 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L            I   S  +  V  +    L R  + +   AL  +Y+  F      
Sbjct: 1   MSLPQLAKGAGQTLSISFLSIAISTVGGVLYGVL-RTLNVRWLNALLRIYLELFR----- 54

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            + ++   Y L F  P+    +        P F    + LS + A+ + E+ R  L ++P
Sbjct: 55  AIPVLVWLYLLFFGLPIFFGLSL-------PSFWCAVLVLSLWGASEVGEVARGALHSLP 107

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA +++GL   +    VLLPQA++ + PP  + Y  ++K SSLAV +G  D++ VG
Sbjct: 108 RGQREAGLSIGLNAAQLYGYVLLPQALKRMTPPTINVYTRIIKTSSLAVLIGVVDVIKVG 167

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             II +T +++ I       +  +   ++     L  +
Sbjct: 168 QQIIERTYESVLIYGALFLFFFFICYPLSAASRVLERR 205



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  +T+ G L G  R    + +  + R+Y+E+FR IP LV ++ L
Sbjct: 6   LAKGAGQTLSISFLSIAISTVGGVLYGVLRTLNVRWLNALLRIYLELFRAIPVLVWLYLL 65

Query: 149 YKSVL 153
           +  + 
Sbjct: 66  FFGLP 70


>gi|124026132|ref|YP_001015248.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           NATL1A]
 gi|123961200|gb|ABM75983.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Prochlorococcus marinus str.
           NATL1A]
          Length = 344

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 18/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +R     TLT+       +FS  +GIVL+L      RH      + L  ++I      
Sbjct: 128 IMSRQWGGLTLTILLTVCSSLFSLPIGIVLALC-----RHSSLPIIQKLSSIFIDV---- 178

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  + LIA+ +      P+     F+              A + + +A+IAE +R GL 
Sbjct: 179 -MRAIPLIAVLFFGQLLIPL-----FLPVEIEIDRVWRAIFAFTLFVSAYIAEDIRGGLQ 232

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P  Q+EAA +LGL   +  + +L+PQA+R  +P LT+Q + L +N+SL   +G  +L+
Sbjct: 233 SIPNTQIEAANSLGLNQYQIIQFILIPQALRIALPALTNQSIGLFQNTSLMAILGLVELL 292

Query: 351 SVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +G +I+      GQ IE+ +    +Y  +  ++A+    L  ++ +
Sbjct: 293 GIGRSILANPEFIGQYIEVYVWLACVYWIVCTIMAVLARHLEQRMTI 339



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L     + +  IG ++   R S+  ++  +  ++++V R IP + V+FF    
Sbjct: 135 GLTLTILLTVCSSLFSLPIGIVLALCRHSSLPIIQKLSSIFIDVMRAIPLIAVLFFGQLL 194

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +   LP+      +   +F     +S             + +  +    SL   +     
Sbjct: 195 IPLFLPVEIEIDRVWRAIFAFTLFVSAYIAEDIRGGLQSIPNTQIEAANSLGLNQYQIIQ 254

Query: 212 HEKTGKAL-----PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
                +AL      L   S  L      + ++ L   L   + +L    FIG       +
Sbjct: 255 FILIPQALRIALPALTNQSIGLFQNTSLMAILGLVELLGIGRSILANPEFIGQYIEVYVW 314

Query: 267 MSLYIALSCYTAAFIA 282
           ++    + C   A +A
Sbjct: 315 LACVYWIVCTIMAVLA 330


>gi|77457435|ref|YP_346940.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77381438|gb|ABA72951.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 236

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ + + ++   +TM   +    F F++ I LS+   R+S HF+ +       
Sbjct: 6   QEYWKAFLYTDGQNITGLAMTMWLLSASIFFGFIVSIPLSIA--RVSPHFYIRWPVQF-- 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    +     +  S          +A +  T A+ 
Sbjct: 62  ---YTYLFRGTPLYIQLLICYTGIYSLAAVRAQPLLD-SFFRDAMNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P A+R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMNHGEVEAAKAYGLTGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   IYL+++  +         +
Sbjct: 178 FTATIPDILKVARDANSATFLTFQSFGIAALIYLTITFALVGLFRLAERR 227



 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 38/120 (31%), Gaps = 7/120 (5%)

Query: 83  SSYATAIL-------VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             Y  A L        G   T WL  + +    I+   +   R+S +  + W  + Y  +
Sbjct: 6   QEYWKAFLYTDGQNITGLAMTMWLLSASIFFGFIVSIPLSIARVSPHFYIRWPVQFYTYL 65

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FR  P  + +   Y  + S+  +    ++  F     N  +    L             +
Sbjct: 66  FRGTPLYIQLLICYTGIYSLAAVRAQPLLDSFFRDAMNCTILAFALNTCAYTTEIFAGAI 125


>gi|134290994|ref|YP_001114763.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134134183|gb|ABO58508.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 240

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 1/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + +            ++    ++ + L  LY + F       LV+    +  
Sbjct: 23  LMTVALTLAALAVGAAIGAVIAAAKLSRHRSARLLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G
Sbjct: 82  STLVTAVGQWFGADGFIGVPPFVIGALAVGMISGAYQAEVYRAAVLAVAKGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+       N T Q  
Sbjct: 142 MPRGMVLRRILVPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQVAANSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +     NR  A +    ++
Sbjct: 202 LFFVAGGALYLLMTALSNRVFNRAEALVGRSFRR 235


>gi|15598121|ref|NP_251615.1| histidine transport system permease HisM [Pseudomonas aeruginosa
           PAO1]
 gi|107102474|ref|ZP_01366392.1| hypothetical protein PaerPA_01003536 [Pseudomonas aeruginosa PACS2]
 gi|116050927|ref|YP_790249.1| histidine ABC transporter, inner membrane permease [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|218890876|ref|YP_002439742.1| histidine transport system permease HisM [Pseudomonas aeruginosa
           LESB58]
 gi|313108082|ref|ZP_07794241.1| histidine transport system permease HisM [Pseudomonas aeruginosa
           39016]
 gi|9949019|gb|AAG06313.1|AE004718_10 histidine transport system permease HisM [Pseudomonas aeruginosa
           PAO1]
 gi|115586148|gb|ABJ12163.1| histidine ABC transporter, inner membrane permease [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|218771101|emb|CAW26866.1| histidine transport system permease HisM [Pseudomonas aeruginosa
           LESB58]
 gi|310880743|gb|EFQ39337.1| histidine transport system permease HisM [Pseudomonas aeruginosa
           39016]
          Length = 237

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 88/228 (38%), Gaps = 4/228 (1%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           VL                 +     + + +  LG +L++    ++R       +    LY
Sbjct: 4   VLDEYWQAYLWTDGLQLTGLAMTLWLLILAVALGFLLAIPL-AVARTCGNPLLRYPVWLY 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T++  G P  + +   Y   +    +   +F+  +     F    +A    T A++ E
Sbjct: 63  --TYVFRGTPLYIQLLFFYTGVYSLNAIRAQDFL-NAFFRDGFNCTVLAFVLNTCAYMTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I    +   P G++EAA A G+      R ++LP A+R  +P  +++ + +L ++S+A  
Sbjct: 120 IFAGAIRNTPHGEVEAARAYGMGGFTLYRRIVLPSALRRALPYFSNEVILMLHSTSVAFT 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               DL+ V   + + T        I   +Y   + ++     R   +
Sbjct: 180 ATVPDLLKVARDVNSATYAPFLSFGIAGALYAGTAFLLIWLFRRGELR 227



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL    +    ++   +   R   N L+ +   +Y  VFR  P  + + F Y
Sbjct: 20  LTGLAMTLWLLILAVALGFLLAIPLAVARTCGNPLLRYPVWLYTYVFRGTPLYIQLLFFY 79

Query: 150 KSVLSVLPIPDHSIVLPFG 168
             V S+  I     +  F 
Sbjct: 80  TGVYSLNAIRAQDFLNAFF 98


>gi|222081580|ref|YP_002540944.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726259|gb|ACM29348.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 216

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 88/223 (39%), Gaps = 14/223 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +   A +      + +++ +      R        +L +     F     
Sbjct: 6   FNDLPLYLSGLAITAAVSACGICIAVLVGILLALSLRSRLRPL--SLAVRVYVEFARGAP 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LVL  L Y       VL              +++  + L  Y A   AEI R+G  AV
Sbjct: 64  LALVLFLLYYGGPQFGLVL------------SPYVAGIVGLGLYGAGPFAEIFRAGFNAV 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+G+ EAA  LGLT  +    V LPQAMR  +PP   Q +NL+K S++   +   +L  V
Sbjct: 112 PKGECEAAAMLGLTPGQTFLYVELPQAMRLTLPPSIGQAINLVKESAVLSVITLGELTKV 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            GTI + +   +   +    +Y +L   IA        ++A K
Sbjct: 172 AGTISSISFAVVTPYVTVALLYWALVETIARIGFYAERRLAAK 214



 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  ++  G+  A ++G L+     S  + ++   RVYVE  R  P  +V+F L
Sbjct: 12  YLSGLAITAAVSACGICIAVLVGILLALSLRSRLRPLSLAVRVYVEFARGAPLALVLFLL 71

Query: 149 YKSVLSV 155
           Y      
Sbjct: 72  YYGGPQF 78


>gi|83952545|ref|ZP_00961276.1| ABC polar amino acid transporter, inner membrane subunit
           [Roseovarius nubinhibens ISM]
 gi|83836218|gb|EAP75516.1| ABC polar amino acid transporter, inner membrane subunit
           [Roseovarius nubinhibens ISM]
          Length = 221

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 15/235 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            D  I   F + +           +     I      +G++  LFA  L      +  + 
Sbjct: 1   MDQLIEQFFNIEIMIAAWPTILRGLWMTLAICAVVIPMGLLGGLFA-ALGMLSQNRALRW 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             + ++  F       L LI +   L F    L              F ++ IA     +
Sbjct: 60  ATVGFVDFFRAIPPLVL-LIFVYSGLPFAGLRL------------SPFAAVAIAFLLNNS 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI R+G+ +V  GQ EAA + GL   +    V+LPQA+R+++P L S  + ++K +
Sbjct: 107 AYYGEIFRAGIGSVGTGQTEAARSTGLGASQTMAYVVLPQAVRNVLPDLISNTIEVVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           SLA  V  A+++       + T  A   +++   IYL +   +   ++R   +IA
Sbjct: 167 SLASVVSLAEMLYAADMARSVTYSA-SPLVLAAGIYLVILWPLVRLVSRFERRIA 220



 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL G   T  +    +    + G     G LS N+ + W    +V+ FR IPPLV++
Sbjct: 18  WPTILRGLWMTLAICAVVIPMGLLGGLFAALGMLSQNRALRWATVGFVDFFRAIPPLVLL 77

Query: 146 FFLYKSVL 153
            F+Y  + 
Sbjct: 78  IFVYSGLP 85


>gi|330427241|gb|AEC18575.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Pusillimonas sp. T7-7]
          Length = 279

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 74/306 (24%), Positives = 125/306 (40%), Gaps = 42/306 (13%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +   G+I  TI+G L G        LV W                     
Sbjct: 15  LLEGTKMTVKITLLGLIGGTILGFLAGVITTYVKVLVTW--------------------- 53

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
             + ++V+ I    I+L    +L +  LS          +I +   +L    +     LS
Sbjct: 54  KTTAIAVVSIVALYILLRLASWLGDTVLSGVPDWAWLTLQIVLAVLLLVRFAAYIPVALS 113

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
                       L  +   +I G P +V +   Y   F  P++  +            ++
Sbjct: 114 -----------FLAQVYILVIRGTPIVVQVMFIY---FALPLIFGWRI-------DAVLA 152

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
               L   + A+I+EIVR  L++VP+G  EA  A+GL   K    ++ P A+R +IP + 
Sbjct: 153 AIFTLVINSGAYISEIVRGALLSVPKGLKEAGQAMGLPFYKILAYIIGPVALRRMIPAMG 212

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q +  LK+SSL + +G A+L   G  II    +++EI      +YL L+  IAL +  +
Sbjct: 213 NQCIISLKDSSLFIVIGVAELTRQGQEIIASNFRSVEIWGAVAVLYLILTGFIALTLKFI 272

Query: 389 NAKIAL 394
             +  +
Sbjct: 273 EHRTQI 278


>gi|307725562|ref|YP_003908775.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307586087|gb|ADN59484.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 265

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 18/209 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LGIV    A  L    H +       +++  F       ++L+        
Sbjct: 30  LILSVISTALGIVAG-MALALCAVSHTRWLTWPVRVFVDIFRGLPAALVILV-------- 80

Query: 247 DKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              V      +G     P  +    +AL+  ++A+IAEI RSG+ +V RGQM A  ALG+
Sbjct: 81  ---VGQGLAPVGLLVFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRGQMSACQALGM 137

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361
           T+    R V++PQ +R I+P L +Q+++++K+SSL   +G      DL ++G      T 
Sbjct: 138 TYWSGMRHVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIGQNAAVNTA 197

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +  ++    +YL +++ +   +N L+ 
Sbjct: 198 N-LSPLVAAGAVYLLITVPLTHAINHLDR 225



 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 4/188 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G VNT  L+        + G  +    +S  + + W  RV+V++FR +P  +VI  + + 
Sbjct: 25  GLVNTLILSVISTALGIVAGMALALCAVSHTRWLTWPVRVFVDIFRGLPAALVILVVGQG 84

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +  V  +       P  +       S     +  +    V    +    +L  T  S   
Sbjct: 85  LAPVGLLVFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRGQMSACQALGMTYWSGMR 144

Query: 212 HEKTG----KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           H        + LP L      I    +LV          D   +GQ   +  + +SP   
Sbjct: 145 HVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIGQNAAVNTANLSPLVA 204

Query: 268 SLYIALSC 275
           +  + L  
Sbjct: 205 AGAVYLLI 212


>gi|288561032|ref|YP_003424518.1| amino acid ABC transporter permease protein [Methanobrevibacter
           ruminantium M1]
 gi|288543742|gb|ADC47626.1| amino acid ABC transporter permease protein [Methanobrevibacter
           ruminantium M1]
          Length = 217

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 103/212 (48%), Gaps = 11/212 (5%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             M T+ +IF+ + +  I L L      R    K  +     YIS  ++ G P ++ + +
Sbjct: 12  WGMGTSIEIFLLTLLFSIPLGLAVAA-GRMSSFKPLQWFMKAYIS--IMRGTPLMLQLIV 68

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +   +       + F    +     +++ IA +   AA+ AEI R G+ ++P GQ EAA
Sbjct: 69  VFFGPY-------YIFGMTLSRDYRMIAVIIAFTINYAAYFAEIFRGGIESIPNGQYEAA 121

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             LG T  +   +++LPQ ++ ++P +T++ + L+K++SL+  +   ++ +V   I    
Sbjct: 122 QVLGYTRVQTFFIIILPQVVKIVLPSITNEVITLVKDTSLSFVLAIPEMFTVAKQIA-AA 180

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +I  +LI    Y   + ++A+ M R   ++
Sbjct: 181 EASISALLIAGGFYYVFNALVAIIMERFEKRL 212



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 31/63 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  +    ++ +  +G  V AGR+S+ K + W  + Y+ + R  P ++ +  +
Sbjct: 10  LLWGMGTSIEIFLLTLLFSIPLGLAVAAGRMSSFKPLQWFMKAYISIMRGTPLMLQLIVV 69

Query: 149 YKS 151
           +  
Sbjct: 70  FFG 72


>gi|311742428|ref|ZP_07716237.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Aeromicrobium marinum DSM 15272]
 gi|311314056|gb|EFQ83964.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Aeromicrobium marinum DSM 15272]
          Length = 285

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 21/209 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V + + G+V +       +    +  +    + +  F    +P L+LI   + L+  
Sbjct: 82  LAIVGALLFGVVFA-----AGKLSDHRVVRWPCWVVVEFF--RAVPLLMLIFFVWSLY-- 132

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                          +     L + L  Y  + +AE  R+G+ AVP GQ+EAA ALGL  
Sbjct: 133 ------------GFSTNIIAPLVVGLILYNGSVLAETFRAGMNAVPTGQVEAAYALGLRK 180

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
               R+V LPQA++ ++P L SQ +  LK++SL   +    L   G  I N+ G  ++  
Sbjct: 181 NAVMRIVQLPQAIKIMLPALVSQCIVALKDTSLGYYIVAPGLTYAGRQIWNEFGNRLQTA 240

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L+   IY+ L+++++LF   L  +++ KE
Sbjct: 241 LVLAAIYIVLNLLLSLFATWLQKRLSSKE 269



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y   I    + T   A   ++ A + G +  AG+LS +++V W C V VE FR +P 
Sbjct: 62  TPAYLEVIGRSLLETLRAAGLAIVGALLFGVVFAAGKLSDHRVVRWPCWVVVEFFRAVPL 121

Query: 142 LVVIFFLYKSV 152
           L++IFF++   
Sbjct: 122 LMLIFFVWSLY 132


>gi|218507774|ref|ZP_03505652.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli Brasil 5]
          Length = 338

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 100/228 (43%), Gaps = 20/228 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +      SF LGI+L+L      R       + + +++I       L T+
Sbjct: 126 WGGLLVTLVLSFVGIAVSFPLGIILAL-----GRRSQMPVIRTVCIVFIEVVRGVPLITV 180

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A           +    F+       + +   I +S + +A++AE++R GL A+P+G
Sbjct: 181 LFMA----------SVMLPLFLPAGWTVDKLLRAIIGVSIFASAYMAEVIRGGLQAIPKG 230

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A +LGL + +  RL+++PQA++ +IP + + ++ + K++SL   +   DL+ +   
Sbjct: 231 QFEGADSLGLGYWQKMRLIIMPQAIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGIVRL 290

Query: 356 -----IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                        +  ++   F +      ++ +   +   +    K+
Sbjct: 291 NFVDPNWATAVTPLTGLIFAGFSFWLFCFGMSRYSAFMERHLDTGHKR 338



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +C V++EV R +P + V+F  
Sbjct: 125 LWGGLLVTLVLSFVGIAVSFPLGIILALGRRSQMPVIRTVCIVFIEVVRGVPLITVLFMA 184

Query: 149 YKSVLSVLPIPD 160
              +   LP   
Sbjct: 185 SVMLPLFLPAGW 196


>gi|308186172|ref|YP_003930303.1| ABC transport system, permease protein [Pantoea vagans C9-1]
 gi|308056682|gb|ADO08854.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 239

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 2/204 (0%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + ++G V+       ++    +  + L   Y   F       LV+    +        
Sbjct: 28  FAALLVGAVVG-SGVAAAKLSPHRAVRWLGEGYSVIFRGI-PELLVIYLFYFGGSGLITQ 85

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +GQ     G   +P F+   +A+   + ++ AE+ R+  +A+ +G++EAA+A+G+   + 
Sbjct: 86  IGQLFGADGFIEAPPFLIGALAIGLISGSYQAEVYRAARLALAKGEIEAAVAIGMPRWRI 145

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + +LLPQ  R  +P L++ +   LK+S+L    G  +L+         T       L+ 
Sbjct: 146 RQRILLPQVARYALPGLSNVWQMSLKDSALVSVTGIVELMRASQIAAGSTRDYFSFYLVG 205

Query: 371 MFIYLSLSIMIALFMNRLNAKIAL 394
              YL L+++      R  +++  
Sbjct: 206 GACYLLLTLLSNRAFLRAESRLGR 229


>gi|91778560|ref|YP_553768.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691220|gb|ABE34418.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 247

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 13/204 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-----ISTFLIFGLPTLVLIALKYQLH 245
           +    L +VLS+ +  LS       G AL L       +   ++     + ++ L +   
Sbjct: 23  LGGAALTVVLSVVSALLSAAVGLAGGVALSLTRGGARLLLIGIVAFFRAIPVLMLIFWTF 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L   +        P   ++  ALS    A+++  V +G+++V  GQ +AA++LGL
Sbjct: 83  FLMPILLHVDV-------PGLAAVVCALSLIGGAYLSHAVHAGIVSVGAGQQQAALSLGL 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +A R V+LPQA+R ++P   +Q+++L+K++SLA  VG  +   +   + ++      
Sbjct: 136 TRWQALRYVVLPQAVRIMMPSFVNQWVSLVKDTSLAYIVGVPEFTFLANQVNSRLMIYPA 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRL 388
           +I +    +YL L   +  F  R+
Sbjct: 196 QIFVFVGIVYLLLCSALQWFAYRV 219


>gi|86136435|ref|ZP_01055014.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85827309|gb|EAQ47505.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 258

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 9/232 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                +        + T   I V + VLG +L++    L++        A    + +  +
Sbjct: 32  WDWIPKYAPLALEGLWTTIWILVVTTVLGFLLAIPLG-LAQAIGPWYLSAPARAFCT--V 88

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEI 284
           I G P L+ I L Y  +    +  QF +I  S + P     +    +AL+   A +  E+
Sbjct: 89  IRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVMALTLSYAGYEGEV 146

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R     V +GQ+EAA + G+      R + LPQA+R+++P L  + +  LK + L   +
Sbjct: 147 MRGAFSGVAKGQLEAAKSFGMPRFTMFRRIWLPQAIRNVLPTLGGETILQLKATPLVATI 206

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              ++ +V   + + T    E +L+    Y+ ++ +I L   R  A+I  + 
Sbjct: 207 TVVEIYAVSSRVRSDTFIVYEPLLLLALAYMVIAGLIGLAFKRFEARIPQRR 258



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 34/104 (32%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   L G   T W+     +   ++   +G  +      ++   R +  V R  P L+ 
Sbjct: 38  YAPLALEGLWTTIWILVVTTVLGFLLAIPLGLAQAIGPWYLSAPARAFCTVIRGTPLLLQ 97

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           I+ LY  + S+ P            +L             + A 
Sbjct: 98  IWLLYYGLGSLFPQFPWIRSSELWPYLRQAWPYAVMALTLSYAG 141


>gi|289522552|ref|ZP_06439406.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289504388|gb|EFD25552.1| glutamine ABC transporter, glutamine-binding protein/permease
           protein [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 221

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 14/219 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + L  + L           K+ +    +G+VL L      + +  KT + +  +Y 
Sbjct: 1   MLDALVLIQKSLPTLLEGTFVTIKLTILIVAMGLVLGLIL-AFCQTYGSKTLRIVVAVYD 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F    +P LVL+ L +               G       F +  +AL    AA++ +I
Sbjct: 60  RIF--RSIPELVLLLLVFY-----------GMPGIGLRLSPFYAAVVALGLRAAAYMGQI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R   ++V   Q+ AA +LG++  KA   V+ PQAMR+ IPP  ++Y  +LK++SLA A+
Sbjct: 107 FRGSFMSVGSDQLTAAYSLGMSEYKAFIYVIFPQAMRAFIPPFANEYAIILKDTSLAYAI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           G  +L+  G  II    + + I L    IY  L+  +A 
Sbjct: 167 GVVELLRQGQYIITVEYEPLPIFLAIAGIYFVLTFGVAR 205


>gi|255019253|ref|ZP_05291379.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL F2-515]
          Length = 173

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/170 (27%), Positives = 92/170 (54%), Gaps = 12/170 (7%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L I  +++ G P L+ +   Y   +  P++          V     +++IA     AA+
Sbjct: 8   ILNIYIWIMRGTPLLLQLIFIY---YGLPII--------GVVFDRMDAVFIAFILNYAAY 56

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL
Sbjct: 57  FAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSL 116

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              +G  DL+  G   +++    I ++L+   IYL+L+ ++ +   +L  
Sbjct: 117 VYILGIGDLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTVLFKQLEN 165


>gi|194017355|ref|ZP_03055967.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
 gi|194011223|gb|EDW20793.1| L-cystine transport system permease protein TcyL [Bacillus pumilus
           ATCC 7061]
          Length = 232

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 13/228 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             + +  + L    LT         F+ ++G++ +       R       K L ++Y+S 
Sbjct: 7   DWLRIFLQVLERLPLTFFIIIVSLFFAIIIGLLFACI-----RIKQIPVLKQLAVIYLSF 61

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                 P +V + L Y   F  P L     I         + + +  S +T A+++E+ R
Sbjct: 62  T--RSTPLIVQLFLIY---FGLPQLLLVAGIQ-INHWDRVLFVMMTFSLHTGAYLSEVFR 115

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S   +V + Q+EAA  +G+T  +A   +++PQA    +P L +  ++L+K++++A  +G 
Sbjct: 116 SAYSSVGKDQLEAAYIVGMTDTQALIRIIIPQAFLIALPNLGNYTIDLVKDTAIAFTIGL 175

Query: 347 ADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            D++     I+         E+ +I   +Y  + + I L    L  K 
Sbjct: 176 IDIMGQVKIILGNNYGIGMFEVYVIIAIVYWLICMSIELITMLLERKF 223


>gi|241205166|ref|YP_002976262.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240859056|gb|ACS56723.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 220

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 18/223 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +G       L     T   +   F  +FV G++LSL      +       +    LY++
Sbjct: 10  DYGAEWLPLLLRAMVNTALLSVCAFALAFVFGLLLSLC-----QKSSFAALRYFAALYVT 64

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             ++ G+P L ++ L Y           F   G   V   F +    L+   AA +AE+ 
Sbjct: 65  --IVRGVPLLAVLFLIY-----------FGLPGVGIVLDAFGAAIAGLALCFAAQVAELF 111

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL A+P GQ EAA+A G T  ++  L++LPQ  R I+ P+   +++LLK+SSLA  + 
Sbjct: 112 RAGLKAIPAGQSEAALAAGFTPAQSFVLIILPQVARVILAPMIITFVSLLKDSSLASLIT 171

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             +LV  G ++  +    ++I +     Y +++   ++   RL
Sbjct: 172 VNELVLTGRSMATEYFLPLQIYIAVGLCYFAIAWPFSVLSRRL 214



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L   VNT  L+      A + G L+   + S+   + +   +YV + R +P L V
Sbjct: 15  WLPLLLRAMVNTALLSVCAFALAFVFGLLLSLCQKSSFAALRYFAALYVTIVRGVPLLAV 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +F +Y  +  V  + D       G+ L               A 
Sbjct: 75  LFLIYFGLPGVGIVLDAFGAAIAGLALCFAAQVAELFRAGLKAI 118


>gi|330719365|ref|ZP_08313965.1| polar amino acid ABC transporter permease [Leuconostoc fallax KCTC
           3537]
          Length = 213

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 19/230 (8%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + + + +    L+    T+       + S  LGI++SL            T + L   YI
Sbjct: 1   MAYLLEILPSLLNGLQSTLGVFFVTLIGSIPLGILVSLGL-----RSEFFTIRWLLNGYI 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             +++ G P L+ +   Y                     P F +  IA     AA++AEI
Sbjct: 56  --WIMRGTPLLLQLIFIYY-----------GLGMMGISFPRFEAAVIAFIINYAAYLAEI 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R GL +VP+GQ +AA  LG    +    ++LPQ ++ ++P + ++ +NL+K++SL   +
Sbjct: 103 FRGGLQSVPKGQYDAAKVLGFNKIQTFFKIILPQVIKIVVPSVGNEVINLVKDTSLVYVI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D++  G    ++    +  +L+ +   L ++ ++ L +     ++ +
Sbjct: 163 GLGDILRAGNIAASRDVTLVPYLLVGLLY-LLMTAIVTLVLRNSEKRLNI 211



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  +T  + F  +I +  +G LV  G  S    + W+   Y+ + R  P L+ + F+
Sbjct: 11  LLNGLQSTLGVFFVTLIGSIPLGILVSLGLRSEFFTIRWLLNGYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +               +N 
Sbjct: 71  YYGLGMMGISFPRFEAAVIAFIINY 95


>gi|307320131|ref|ZP_07599551.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306894177|gb|EFN24943.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 241

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 3/209 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I V  + LG+ L +      + +     +   LL   T ++  +P LVLI L Y    
Sbjct: 31  IEIAVGGYALGLALGI-GGAFGKLYGGPVLRD--LLECYTTVVRAVPELVLILLLYYAGT 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G+      ++    +     A+  E++R  + AVP GQ+EAA A G++
Sbjct: 88  DLLNQFLGAIGVGAVDISGLVAGIFVIGVVQGAYSTEVLRGAIKAVPAGQIEAARAYGMS 147

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R + LP  +   IP L + +L   K+++L   VGF++L  V       T   +  
Sbjct: 148 PLLVLRRITLPAMLPYAIPGLANLWLIATKDTALLAVVGFSELTLVTRQAAGATKAYLLF 207

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 +YL+L+++  +F+  L       
Sbjct: 208 FCAAGALYLALTLVSNVFIGMLERHARRG 236


>gi|71735563|ref|YP_274485.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|71556116|gb|AAZ35327.1| amino acid ABC transporter protein, permease protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 216

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 13/182 (7%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                    L   Y+S F     P +V +   Y L F  P+             P   + 
Sbjct: 45  RSQITIVHRLSKGYLSFF--RNTPLVVQL---YVLFFALPL--------AGITFPAITTG 91

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I L CY AA+IAE  R  +  +P GQ EAA AL  +     R ++LPQA++ ++P L +
Sbjct: 92  VIGLGCYYAAYIAEAYRGAIDDIPAGQWEAARALDFSRGDTWRRIILPQALKPMLPVLGN 151

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
             + + K + L   +   +L      I   T +  E   +   ++L++S+  +L    L 
Sbjct: 152 YLIGMFKETPLLAVITIPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLE 211

Query: 390 AK 391
            +
Sbjct: 212 RR 213


>gi|312171453|emb|CBX79711.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora ATCC BAA-2158]
          Length = 221

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + V G+ L +    L      K   A  L  +   LI   
Sbjct: 11  WPFWPQLISGLWATIQLTVMATVGGVALGMVGAAL---RSGKPTLASRLWGVYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPNLGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIRVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA  LGLT ++    V+LP AM+ I P L SQ + ++  SS+   V F +L   
Sbjct: 117 PKGQWEAARVLGLTRQQTFIRVVLPPAMKRIYPALVSQCIIVMLGSSVVSQVSFEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              I ++T  + E+ L+   +YL+LSI +   +
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLLYLALSIAMRQLL 209



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + S   +   ++ G   T  L     +    +G +  A R     L + +  VYVE+ 
Sbjct: 5   LNFPSLWPFWPQLISGLWATIQLTVMATVGGVALGMVGAALRSGKPTLASRLWGVYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLIN 100


>gi|78355232|ref|YP_386681.1| amino acid ABC transporter permease [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78217637|gb|ABB36986.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 222

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 13/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +  I   + +LG+ + +    + + +     + L  LY+  F   G+P LVL+ L Y  
Sbjct: 21  VSLLIVAGAMMLGLAMGI-PMAVGQVYGSPFLRRLIGLYVWFF--RGVPILVLMFLFYFG 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F+   L                +  + L   +AA+ ++I R  + A+P GQ++AA A+G
Sbjct: 78  VFELLGLNL----------SAISATALVLGMTSAAYQSQIFRGSIQALPAGQLKAARAMG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +A R V+LPQA+R  +P  +++Y  +LK+S+LA  VG  D+ +    + ++T + +
Sbjct: 128 MSDSQAIRAVILPQALRLSLPGWSNEYSIILKDSALAYVVGAMDIFTRTHFVASRTYEHL 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + +    +Y  +++     +  L  K+ +
Sbjct: 188 PLFIAAGALYFVITLTGVKLLAALEKKVRI 217



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 32/68 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + +  +    M+    +G  +  G++  +  +  +  +YV  FR +P LV++F 
Sbjct: 14  YILQGGLVSLLIVAGAMMLGLAMGIPMAVGQVYGSPFLRRLIGLYVWFFRGVPILVLMFL 73

Query: 148 LYKSVLSV 155
            Y  V  +
Sbjct: 74  FYFGVFEL 81


>gi|182678575|ref|YP_001832721.1| polar amino acid ABC transporter, inner membrane subunit
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634458|gb|ACB95232.1| polar amino acid ABC transporter, inner membrane subunit
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 385

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 110/278 (39%), Gaps = 13/278 (4%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSI----VLPFGMFLNNRGLSFPTLTMDTNAKI 189
           E +R +  L++ F L   +L  +    H+      L F +      L     T      +
Sbjct: 108 ERWRVVTVLLLGFVLIAWLLWPIRKGAHTDKRVAALLFFLLYPLIALILLRGTPWLGLPL 167

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                  GI LSL    +        G  L L   ST  +  L + + I     +     
Sbjct: 168 VDTDLWGGIFLSLVVAGVGIVVSLPLGIFLALGRRSTLPVVSLASTLFIEFVRGVPMITV 227

Query: 250 VLGQFN----FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +         F+  S      +   I ++ + +A++AE+VR GL AVP+GQ E A ALGL
Sbjct: 228 LFMANFMLPLFLPASMSVDRLIRPLIGVALFASAYMAEVVRGGLQAVPKGQFEGAAALGL 287

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV---GGTIINQTGQ 362
              K  +LV+LPQA+  +IP + + ++ L K+++L  AVG  D +             G 
Sbjct: 288 PPWKTLQLVVLPQALAHVIPGIVNTFIGLFKDTTLVAAVGIFDFLRTVDSARLDPAWAGP 347

Query: 363 AIEI--ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            I     L     Y      ++ +   +  ++A  + +
Sbjct: 348 TISASGYLFAALFYFVFCFGMSRYSIGVERRLARGQAR 385


>gi|313622667|gb|EFR93034.1| L-cystine transport system permease protein TcyM [Listeria innocua
           FSL J1-023]
          Length = 236

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 14  MAMLKTIPLTLVMTFFPILFGFIIAILLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 72

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F+    +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 73  MLIYLGIPLIVDF-LSKSFDLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIG 131

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA  + +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 132 QMEAAYSMGYTHGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 191

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA  +
Sbjct: 192 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYQ 232


>gi|170761003|ref|YP_001786791.1| His/Glu/Gln/Arg/opine ABC transporter permease [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407992|gb|ACA56403.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Clostridium botulinum A3 str. Loch Maree]
          Length = 221

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 85/182 (46%), Gaps = 10/182 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K   ++  +++S F   G P +  +   Y              I          +  
Sbjct: 46  LKIKVLYSISKIWVSFF--RGTPLIAQLFFLYFGIVQL--------IPSLKNMDAMTAAI 95

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L    +A+++E +R  + +V +GQ+EA++++G+T  ++ R ++ PQA R  +P L++ 
Sbjct: 96  IGLGFNASAYMSETLRGAISSVDKGQIEASLSIGMTSIQSMRRIVFPQAARVALPALSNS 155

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++++K S+LA  +G  ++++V  +    + + +E     + IY  +        N L  
Sbjct: 156 FVDIIKGSALAFTLGVVEIMAVAQSEGASSYRFLESFTAVIIIYWIIISAFGYLQNILER 215

Query: 391 KI 392
           ++
Sbjct: 216 RM 217


>gi|319408773|emb|CBI82430.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella schoenbuchensis R1]
          Length = 250

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T   +    + +  +G+++    T        +  +A+  +++   ++  +P L
Sbjct: 34  LDGFKNTAILSVSSLILAVFVGVIIGTIRTLPHTSIINRVLRAIGRVWVE--IMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +      + +  AL  +T+A +AE VRSG+ ++  G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAINFSPIVLITCALGFFTSARVAEQVRSGIESISSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G T  ++ R ++LP+A+R+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFTTGQSYRYIILPRAIRTILPPLTSEAMGIVKNSSIAFAVSINELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  LI   +Y+ +++ I + M  +   + +
Sbjct: 204 TIEEVSHVYENYLIVTILYIVIALFIFIMMTIIEKMLKI 242



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRVYVEVF 136
             +Y   +L GF NT  L+ S +I A  +G ++G  R   +     +++  I RV+VE+ 
Sbjct: 26  THTYLDTLLDGFKNTAILSVSSLILAVFVGVIIGTIRTLPHTSIINRVLRAIGRVWVEIM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           RNIP LV +F  Y  V  + P   +   +
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPAINFSPI 114


>gi|163839929|ref|YP_001624334.1| glutamate transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
 gi|162953405|gb|ABY22920.1| glutamate transport system permease protein [Renibacterium
           salmoninarum ATCC 33209]
          Length = 512

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/257 (22%), Positives = 112/257 (43%), Gaps = 20/257 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V+ F+                L     +    L     T+       V S +LG+VL++ 
Sbjct: 248 VLAFIIYKFAESGQFSAKKWSLFTFPLVQQNILQGLGSTLSAFGVAAVGSLILGMVLAVG 307

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
                R      G         T L   +P L+L+AL +   +  P +       G    
Sbjct: 308 RLSDRRWISVPVG-------WFTELFRAVPLLILMALMF---YGLPSI-------GFQGM 350

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
             F+++ + L  Y  + +AE++R+G++AVP+GQ EAA A+GL   +   ++LLPQA+R++
Sbjct: 351 TPFIAVVVGLILYNGSVLAEVIRAGILAVPKGQSEAAYAIGLRKTRVMTMILLPQAVRTM 410

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIYLSLSIM 380
           +P + +Q +  LK+++L   + + +L+        QT      I   +I   +Y+   ++
Sbjct: 411 LPVIIAQLVVALKDTALGFIITYQELLYKINYYGGQTSYETPIIPAAIIGGTLYVGCCLI 470

Query: 381 IALFMNRLNAKIALKEK 397
           +A       +++    K
Sbjct: 471 LAGLAKFAESRLRRSPK 487



 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 15/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L            +F FS +  ++L +    L R       +AL   Y++      L  
Sbjct: 7   NLELFGEGFKNTIILFFFSAIFALILGVIVGAL-RVSPVTPMRALGTFYVNVIRNTPLTL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS-LYIALSCYTAAFIAEIVRSGLIAVP 293
           + L           P             +P F+    IALS YTA +++E +R+G+  VP
Sbjct: 66  VFLFFFFGYPKLGFP-------------NPGFVPLAIIALSLYTATYVSEAIRAGINTVP 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EA+ A+GL   +   LV+LPQA R+++PP+ S ++ LLKN+++A      +  ++ 
Sbjct: 113 VGQAEASRAIGLPFGQTMSLVILPQAFRAVVPPMMSVFIALLKNTTVAAGFSVLEAGAIR 172

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +  +   A++ +L     ++ L  +++L   +L  ++  + 
Sbjct: 173 SNLSERGYPAMQSLLWVALGFIILVAVLSLVQRKLENEVESRR 215



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 33/77 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF NT  L F   I A I+G +VGA R+S    +  +   YV V RN P  +V  F 
Sbjct: 11  FGEGFKNTIILFFFSAIFALILGVIVGALRVSPVTPMRALGTFYVNVIRNTPLTLVFLFF 70

Query: 149 YKSVLSVLPIPDHSIVL 165
           +     +       + L
Sbjct: 71  FFGYPKLGFPNPGFVPL 87


>gi|163795107|ref|ZP_02189075.1| polar amino acid uptake family ABC transporter, permease protein
           [alpha proteobacterium BAL199]
 gi|159179505|gb|EDP64034.1| polar amino acid uptake family ABC transporter, permease protein
           [alpha proteobacterium BAL199]
          Length = 300

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 109/288 (37%), Gaps = 14/288 (4%)

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            L  A RL+            +   R    + ++  L  S          +      + L
Sbjct: 22  LLPAADRLAERVRREREVGAPIPQLRARHGVWLVGILVLSAGVAQAQTGAATESVLAILL 81

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               L F     +        +    +  +L   ++S     + G  L    ++ F    
Sbjct: 82  KWTPLLFQGFIFNLAISFLAMAGGTAVGTALGLWQISLLPPVRAGSWL----VTQFFRNA 137

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              ++L    + + F      Q    G     P+++     L+    A ++E+VR  + +
Sbjct: 138 PWLVLLFFCMFLMPF------QIKIFGLVIPLPDWVKATFGLALPVMANVSELVRGAIQS 191

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ E+A +L    R+   +++LPQ ++ ++PP  + Y  L   + LA  VG +++++
Sbjct: 192 IPSGQWESAESLAFNRRQTLWMIILPQCVKRMLPPWMNLYAILTMATVLASVVGVSEVMT 251

Query: 352 VGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + G +++    +T   +      +  +      IAL   RL  + A+K
Sbjct: 252 LTGRVLSAEGGRTDLLVPFYSYILLWFFLYCYPIALLTVRLERRFAVK 299



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +  GF+    ++F  M   T +GT +G  ++S    V     +  + FRN P LV+
Sbjct: 83  WTPLLFQGFIFNLAISFLAMAGGTAVGTALGLWQISLLPPVRAGSWLVTQFFRNAPWLVL 142

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +FF    +   + I    I LP  +
Sbjct: 143 LFFCMFLMPFQIKIFGLVIPLPDWV 167


>gi|283457666|ref|YP_003362251.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283133666|dbj|BAI64431.1| ABC-type amino acid transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 312

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 122/263 (46%), Gaps = 20/263 (7%)

Query: 138 NIPPLVVIFFLYKSVLSVLPI-----PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           NI  L+V       VL+V+       P+    L       +  L     T+   A   V 
Sbjct: 33  NIAALIVFAIFAVYVLTVMGEKGQLEPEKWTDLFTARAWTSYYLPGLASTLSAAAISVVT 92

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S   G++  +     +R    +  + +  + +  F       ++++ + + L   K    
Sbjct: 93  SIAFGLLFGI-----ARLSQYRVFRWIGTVVVEFFRAVP---VLIMMIFFWLFLGK---- 140

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              + G       F+++ I L+ Y  + IAE++RSG+  +PRGQ EA +A+GLT  +   
Sbjct: 141 ---YSGLPPAQLPFIAVVIGLTLYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPSQTLI 197

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +L+PQA  +++P + SQ++ +LK+++L   + + +L++    I +  G  ++ +L+   
Sbjct: 198 QILIPQAFTAMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQTLLLAAA 257

Query: 373 IYLSLSIMIALFMNRLNAKIALK 395
           +++ ++ ++      +  ++A +
Sbjct: 258 LFVIVNFILTAVATGITDRLASR 280



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 40/92 (43%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           +      +  ++ +  L G  +T   A   ++ +   G L G  RLS  ++  WI  V V
Sbjct: 60  EKWTDLFTARAWTSYYLPGLASTLSAAAISVVTSIAFGLLFGIARLSQYRVFRWIGTVVV 119

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           E FR +P L+++ F +  +     +P   +  
Sbjct: 120 EFFRAVPVLIMMIFFWLFLGKYSGLPPAQLPF 151


>gi|271500709|ref|YP_003333734.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270344264|gb|ACZ77029.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 246

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 8/173 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P+ ++S   +  +    ++   + + F  P L                +  +AL     A
Sbjct: 50  PVRWLSHGYVEFIRNTPVLLQIFIIFFGLPSL--------GITMSATTAGILALGINVGA 101

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++E  R+G+ +VP+GQ+EAA  LG+        V+LPQA R++ P + +  + LL  +S
Sbjct: 102 YLSETFRAGIQSVPKGQLEAAWILGIPRWHIFLSVVLPQATRAVWPAIINNLIQLLLGTS 161

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L  A+   +L      I  +T   I+   I   IYL LS + +   +    ++
Sbjct: 162 LLSAIALPELTGTATVINARTLLYIQTFSIVTVIYLLLSNLFSWLGHLAGRRL 214


>gi|170736176|ref|YP_001777436.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169818364|gb|ACA92946.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 237

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 83/205 (40%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIALGFALAVPL-AIARASSNRWISGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              ++     +  +          +A      A+  EI    + A   G++EA +A G++
Sbjct: 84  SLQLVHDHVLL-DTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEVEAGMAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    ++LP A+R  +P  +++ + +L  ++LA      D++ V   + + T  + + 
Sbjct: 143 RFKLHTRIILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +Y  +   +     +L  +
Sbjct: 203 YGIAAVLYAVVVFALIWAFRKLETR 227



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 65/218 (29%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    +     +   +   R S+N+ ++    +
Sbjct: 5   VGQYWQSYLYSDGYR---FSGLAITLWLLVVSIALGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQLVHDHVLLDTFFRNAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G V +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSAGEVEAGMAYGMSRFKLHTRIILPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAVVVFALIW 219


>gi|189439739|ref|YP_001954820.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|239622295|ref|ZP_04665326.1| polar amino acid ABC transporter [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|312133132|ref|YP_004000471.1| hism5 [Bifidobacterium longum subsp. longum BBMN68]
 gi|322688698|ref|YP_004208432.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322690684|ref|YP_004220254.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|189428174|gb|ACD98322.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|239514292|gb|EEQ54159.1| polar amino acid ABC transporter [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|311774131|gb|ADQ03619.1| HisM5 [Bifidobacterium longum subsp. longum BBMN68]
 gi|320455540|dbj|BAJ66162.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|320460034|dbj|BAJ70654.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 311

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 14/242 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
              + +      + +      L    L +       V   +L  +++L   R SR     
Sbjct: 78  WPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALV--RTSRSPILF 135

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + L L+Y  T ++ G+P +V++   Y + F  P LG F  I  S +        IA+ 
Sbjct: 136 PLRILALIY--TTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVL------GTIAVV 184

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              +A+++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++
Sbjct: 185 MGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISM 244

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            K+  L   +G  D V      +  T       ++   +++ +S+   L  +    ++  
Sbjct: 245 QKDVGLISVLGAVDAVRAAQIDVASTYN-FTPYVVASLLFILMSVPFILLNDWYTERLRK 303

Query: 395 KE 396
           +E
Sbjct: 304 RE 305


>gi|296139502|ref|YP_003646745.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296027636|gb|ADG78406.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 298

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/271 (22%), Positives = 108/271 (39%), Gaps = 21/271 (7%)

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +   +V         V+     K  L          ++    F     +     T+    
Sbjct: 47  VAIGFVAAMFAFAVWVLWVMGNKGQLEW----SKWDMIVDSRFWTTYLIPGLWGTLLAAV 102

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V + VLG VL L      R    +  + +    +  F    +  L+L A        
Sbjct: 103 VSIVLAMVLGTVLGL-----GRLSDHRGVRWISGAVVELFRAIPVLILILFAYYAFAAAS 157

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                Q            F ++   L+ Y  + IAEI+RSG+ ++P+GQ EAA ALGL  
Sbjct: 158 LFPSSQL----------AFAAVVFGLTMYNGSVIAEIIRSGINSLPKGQSEAASALGLRK 207

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  RL+LLPQA+ +++P L SQ +  LK+S+L   +G+ ++V  G             +
Sbjct: 208 SQLMRLILLPQAITAMLPALISQMVVALKDSALGYIIGYTEIVRQGIQAGITYRSLFVAL 267

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++   I + ++  +      +  K+  +E++
Sbjct: 268 IVVAVIMIVINYGLTRLARWVERKM--RERR 296



 Score = 64.6 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 22/172 (12%)

Query: 4   NARKTVTRYFSRMKFLYDMR-----VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLS 58
             +        +   L+D R       +  V I     +    +W +             
Sbjct: 17  PPKAPKINPKQKGSVLFDARGPKQQRRDTVVAIGFVAAMFAFAVWVLWV----------- 65

Query: 59  LGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR 118
                +  +   E  +  +   S   + T ++ G   T   A   ++ A ++GT++G GR
Sbjct: 66  -----MGNKGQLEWSKWDMIVDSRF-WTTYLIPGLWGTLLAAVVSIVLAMVLGTVLGLGR 119

Query: 119 LSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           LS ++ V WI    VE+FR IP L++I F Y +  +    P   +     +F
Sbjct: 120 LSDHRGVRWISGAVVELFRAIPVLILILFAYYAFAAASLFPSSQLAFAAVVF 171


>gi|116072942|ref|ZP_01470204.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. RS9916]
 gi|116068247|gb|EAU73999.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. RS9916]
          Length = 300

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 81/151 (53%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R H   +Q+ + ++L  +    +NN+  N+ ++ L L   +LS  AGF + +  +PY S 
Sbjct: 4   RSHRWLLQLGIVVVLLTLTGVLINNLAVNLIRTGLGLSFEWLSRPAGFALAEHPLPYRSS 63

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             YA A+LVG++N+  +  +G++ AT++G L GA R S N L+  +  +YV + R +P L
Sbjct: 64  DPYAWALLVGWLNSLKVILAGLVTATVLGVLAGAARRSINPLLRQLAALYVGLIRQVPLL 123

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           + + F Y   L  LP  + S +       N 
Sbjct: 124 LQLLFWYFVALLGLPRTNPSPLGSLLTLTNQ 154



 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 88/270 (32%), Positives = 131/270 (48%), Gaps = 16/270 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P        P     ++       +    + K+ +   V   VL 
Sbjct: 33  LIRTGLGLSFEWLSRPAGFALAEHPLPYRSSDPYAWALLVGWLNSLKVILAGLVTATVLG 92

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-------------QLHFDK 248
           + A   +R       + L  LY+   LI  +P L+ +   Y              L    
Sbjct: 93  VLAGA-ARRSINPLLRQLAALYVG--LIRQVPLLLQLLFWYFVALLGLPRTNPSPLGSLL 149

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            +  Q   + G  +S EF ++ + LS +T A IAE+VR GL +VPRGQ EA  +LGL+  
Sbjct: 150 TLTNQGISVLGVHLSVEFTAVLLGLSVFTGASIAEVVRGGLDSVPRGQWEAFRSLGLSEA 209

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R V+LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE  L
Sbjct: 210 MGLRRVVLPQALPAILPGLTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIEGFL 269

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           + +F +L L+++I   M  LN  +  + + 
Sbjct: 270 LLLFSFLLLNLIINAAMQLLNRAVISRRQH 299


>gi|312959432|ref|ZP_07773949.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311286149|gb|EFQ64713.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 236

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 95/230 (41%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ + + ++   +TM   +   V  FV+ I LS+     +R   ++  +    
Sbjct: 6   QEYWRPFLYSDGQHITGLAMTMWLLSAALVIGFVVSIPLSI-----ARVSRKRLVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    +     +  +          +A +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSIAAVRAQPVLD-AFFRDAMNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GL+  K    V++P A+R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   IYL+++  +         +
Sbjct: 178 FTATIPDILKVARDANSATFMTFQSFGIAALIYLAVTFALVGLFRLAERR 227



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + ++   ++   +   R+S  +LV W  + Y  +FR  P  + +   Y
Sbjct: 20  ITGLAMTMWLLSAALVIGFVVSIPLSIARVSRKRLVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  +    ++  F     N  +    L             +
Sbjct: 80  TGIYSIAAVRAQPVLDAFFRDAMNCTILAFALNTCAYTTEIFAGAI 125


>gi|299821271|ref|ZP_07053159.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
 gi|299816936|gb|EFI84172.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Listeria grayi DSM 20601]
          Length = 254

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 3/222 (1%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT- 234
           L+    T+     +  F  + G ++++      +  H +  + +   Y+S F        
Sbjct: 31  LTAMVKTIPLTLAMTFFPLLFGFLIAIL-MSFIQIKHVRILEPISKFYVSFFRSTPAILH 89

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++LI L   L  DK +  QF+    +   P  + + IALS    +++ E +RSG+IAV  
Sbjct: 90  IMLIYLGIPLIVDK-LSSQFDLGLSANKIPVAIFVIIALSFTAGSYLTESIRSGIIAVDA 148

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA ++G+THR+  R VL PQA    +P  T+  +  L  +S+A  V   ++     
Sbjct: 149 GQIEAAYSIGMTHREMLRRVLFPQAFIIALPNFTNLAIGFLHTTSIAAIVAVPEITGTAT 208

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + +     ++  +    IY  L+++I      L  K+ + +
Sbjct: 209 IVASDNYAFLDAFIAAAIIYWLLTMIIEAIHALLEKKLTVYQ 250


>gi|224825591|ref|ZP_03698696.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224602512|gb|EEG08690.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 237

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 91/230 (39%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +T+          FVL + L++     +R       +    
Sbjct: 6   QQYWQAYLWSDGYHITGVAMTLWLLTASIAIGFVLAVPLAV-----ARVSPNPLIRG--P 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           ++  T++  G P  + + + Y   +    +     +  +          +A +  T A+ 
Sbjct: 59  VWFYTYVFRGTPLYIQLLVFYTGIYSIESVRAQPLLD-AFFREGINCTLLAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + A P G++EAA A G++     R V+LP A+R  +P  +++ + +L +++LA
Sbjct: 118 VEIFAGAIRATPYGEIEAARAYGMSSFTLYRRVILPSALRRALPYYSNEVILMLHSTTLA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V   + + T  + E   I   +Y  +   +     R   +
Sbjct: 178 FTATVPDILKVARDVNSATYASFEAFGIAGALYAVIVFALVWLFRRGEQR 227



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 27/66 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    ++   +   R+S N L+      Y  VFR  P  + +   Y
Sbjct: 20  ITGVAMTLWLLTASIAIGFVLAVPLAVARVSPNPLIRGPVWFYTYVFRGTPLYIQLLVFY 79

Query: 150 KSVLSV 155
             + S+
Sbjct: 80  TGIYSI 85


>gi|257485081|ref|ZP_05639122.1| amino acid ABC transporter protein, permease protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|330987290|gb|EGH85393.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331010992|gb|EGH91048.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 216

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y L F  P+             P   +  I L CY AA+IAE  R  +  +P GQ
Sbjct: 67  LMVQLYVLFFALPL--------AGITFPAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL  +     R ++LPQA++ ++P L +  + + K + L   +   +L      I
Sbjct: 119 WEAARALDFSRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVIAIPELFQAAKQI 178

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T +  E   +   ++L++S+  +L    L  +
Sbjct: 179 AGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 213


>gi|154687482|ref|YP_001422643.1| YtmM [Bacillus amyloliquefaciens FZB42]
 gi|154353333|gb|ABS75412.1| YtmM [Bacillus amyloliquefaciens FZB42]
          Length = 235

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 3/222 (1%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT- 234
           +     T+     + V   + G  ++L      R F  K   A    Y+S F        
Sbjct: 12  IKQMMKTVPLTLAMTVIPIIAGFFIAL-GNITVRIFRIKWLLACSAFYVSFFRSTPAILH 70

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++LI L   L  D+     F+    +   P  + + +ALS    A++ EI+RSG++AV  
Sbjct: 71  IMLIYLGVPLIADQ-FSRAFHLGWSANQIPVAVFVIMALSLTAGAYMTEILRSGIMAVDT 129

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++GLT  +  R V+LPQA    +P  T+  +  L  +S+A  V   ++     
Sbjct: 130 GQAEAAYSIGLTRSQMIRRVVLPQAFMISLPNFTNIGIGFLHTTSIAAIVAVPEITGTAT 189

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +     +E  +    IY  L++++    +    + A  +
Sbjct: 190 IAASDNYAFLEAFIGAAVIYWGLTLILEAVNSLAEKRAARYQ 231


>gi|113955270|ref|YP_730399.1| polar amino acid ABC transporter permease [Synechococcus sp.
           CC9311]
 gi|113882621|gb|ABI47579.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. CC9311]
          Length = 299

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 77/169 (45%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R      Q+I+ L+L  +    +NN+  N+ ++ L L   +L   AGF + +  +PY   
Sbjct: 3   RSKRWWWQLIIVLVLLTVMGILINNLAVNLIRTGLGLSFDWLWRPAGFALSEHPLPYQPS 62

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S A A+L+G++N+  +  +G++ AT++G   GA R S N L+  +  +YV   R IP L
Sbjct: 63  DSTAWALLMGWLNSLRVIVAGIVLATLLGVSTGAARRSLNPLLRQLAALYVGSIRQIPLL 122

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           + + F Y      LP    + +       N              A + V
Sbjct: 123 LQLLFWYFVAFLGLPSEPFAPLGAVIHLSNQGISLLGVTLSVEFAAVLV 171



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 16/262 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P        P     ++       +    + ++ V   VL  +L 
Sbjct: 32  LIRTGLGLSFDWLWRPAGFALSEHPLPYQPSDSTAWALLMGWLNSLRVIVAGIVLATLLG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG--- 258
           +     +R       + L  LY+ +  I  +P L+ +   Y + F       F  +G   
Sbjct: 92  VSTGA-ARRSLNPLLRQLAALYVGS--IRQIPLLLQLLFWYFVAFLGLPSEPFAPLGAVI 148

Query: 259 ----------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                     G T+S EF ++ + LS +T A IAE+VR GL +VPRGQ EA  +LG+T  
Sbjct: 149 HLSNQGISLLGVTLSVEFAAVLVGLSVFTGASIAEVVRGGLDSVPRGQWEAFRSLGMTEG 208

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R ++LPQA+ +I+P L+SQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE  L
Sbjct: 209 LGLRRIVLPQALPAILPALSSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIEGFL 268

Query: 369 IWMFIYLSLSIMIALFMNRLNA 390
           + +  +L L+++I   M  LN 
Sbjct: 269 LLLLSFLLLNLLINGGMQLLNR 290


>gi|49081868|gb|AAT50334.1| PA0889 [synthetic construct]
          Length = 230

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 6/193 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S +L IVL L      R    +       LY    ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALLSMLLAIVLGLLGAAF-RLSPVRWLAWCGDLY--ATVVRGIPDLVLILLIFY 70

Query: 244 LHFDK--PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                   V  Q  +     ++P F+S    L     A+++E  R   +A+P+GQ EA  
Sbjct: 71  GGQGLLNWVAPQLGYDDYIDLNP-FVSGVGTLGFIFGAYLSETFRGVFMAIPKGQGEAGY 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++HR+    + +PQ +R  IP  T+ +L L+K ++L   VG  D++       + T 
Sbjct: 130 AYGMSHRQVFFRIQVPQMIRLAIPGFTNNWLVLVKATALISVVGLQDMMFKAKQASDATR 189

Query: 362 QAIEIILIWMFIY 374
           +     L    +Y
Sbjct: 190 EPFTYYLAVAGLY 202



 Score = 39.5 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 40/90 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I+ G   T  LA   M+ A ++G L  A RLS  + +AW   +Y  V R IP LV+
Sbjct: 5   YGATIVDGAWLTLQLALLSMLLAIVLGLLGAAFRLSPVRWLAWCGDLYATVVRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNR 174
           I  ++     +L      +     + LN  
Sbjct: 65  ILLIFYGGQGLLNWVAPQLGYDDYIDLNPF 94


>gi|326938358|gb|AEA14254.1| glutamine transport system permease protein glnP [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 221

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 18/185 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++      V SF++G V+ +         + K      +L +   +I  LP L
Sbjct: 16  LKGLLITLEVALVAIVLSFIIGSVIGIL-------RYTKIPVVSQVLGVVVEVIRNLPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I   Y           F             +  +AL+ + AA I+EIVRSGL+++ +G
Sbjct: 69  LIIFFTY-----------FALPEAGLKLEIITAAIVALTIFEAAMISEIVRSGLLSIEKG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA + GLT+ +A   ++LPQA+R ++PPL SQ+++LLK++SLAV +   +L+     
Sbjct: 118 QIEAARSSGLTYVQALWHIILPQALRRMVPPLVSQFISLLKDTSLAVVISLPELMHNAQI 177

Query: 356 IINQT 360
           I  Q 
Sbjct: 178 ISGQN 182



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   +L G + T  +A   ++ + IIG+++G  R +   +V+ +  V VEV RN+P 
Sbjct: 8   TGDHILFLLKGLLITLEVALVAIVLSFIIGSVIGILRYTKIPVVSQVLGVVVEVIRNLPL 67

Query: 142 LVVIFFLYKSVLSV 155
           L++IFF Y ++   
Sbjct: 68  LLIIFFTYFALPEA 81


>gi|257056914|ref|YP_003134746.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586786|gb|ACU97919.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 241

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 16/211 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +     VL +++S+F   L+R       +    + I  F   G    + +   + L F
Sbjct: 22  LLVTALGTVLMLLVSVFLGLLARSS-NLLSRGSARVVIEFF--RGTSLPIQL---WWLFF 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L       G    P  +   +A      A+ AE+VR  L AVPR Q EAA+AL L+
Sbjct: 76  ALPLL-------GIKFDPILV-GVLAFGLNYGAYGAEVVRGSLEAVPRPQWEAAVALNLS 127

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+ PQA+  +IP + + ++ LLK++ L   +   DL+++G +     G    I
Sbjct: 128 PTQRMTRVVWPQAIALMIPSMNNLFIQLLKSTPLLYTISLVDLMTMGESFHEAGGDRTLI 187

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L+ M IY  L+  + L  N     +A+K +
Sbjct: 188 YLVLMAIYFVLAYAVTLLSNMAE--VAVKAR 216



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI--PPL 142
           +   ++ G   T  +   G +   ++   +G    S+N L     RV +E FR    P  
Sbjct: 10  WTDNLVRGLGITLLVTALGTVLMLLVSVFLGLLARSSNLLSRGSARVVIEFFRGTSLPIQ 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +   F    +L +   P    VL FG+
Sbjct: 70  LWWLFFALPLLGIKFDPILVGVLAFGL 96


>gi|327190792|gb|EGE57860.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 359

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 100/228 (43%), Gaps = 20/228 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +      SF LGI+L+L      R       + + +++I       L T+
Sbjct: 147 WGGLLVTLVLSFVGIAVSFPLGIILAL-----GRRSQMPVIRTVCIVFIEVVRGVPLITV 201

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A           +    F+       + +   I +S + +A++AE++R GL A+P+G
Sbjct: 202 LFMA----------SVMLPLFLPAGWTVDKLLRAIIGVSIFASAYMAEVIRGGLQAIPKG 251

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A +LGL + +  RL+++PQA++ +IP + + ++ + K++SL   +   DL+ +   
Sbjct: 252 QFEGADSLGLGYWQKMRLIIMPQAIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGIVRL 311

Query: 356 -----IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                        +  ++   F +      ++ +   +   +    K+
Sbjct: 312 NFVDPNWATAVTPLTGLIFAGFSFWLFCFGMSRYSAFMERHLDTGHKR 359



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +C V++EV R +P + V+F  
Sbjct: 146 LWGGLLVTLVLSFVGIAVSFPLGIILALGRRSQMPVIRTVCIVFIEVVRGVPLITVLFMA 205

Query: 149 YKSVLSVLPIPD 160
              +   LP   
Sbjct: 206 SVMLPLFLPAGW 217


>gi|320095230|ref|ZP_08026930.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977834|gb|EFW09477.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 256

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 16/215 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
           +N   L+         A + V    +GI  SL           F       +   Y+   
Sbjct: 38  VNPEVLAEYAPLYAKAAVLTVKIAAIGIAGSLAVGLVCAAVTQFRIPVIGRIVTAYVE-- 95

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L    P LV +   Y           F                + L     A++AE +R+
Sbjct: 96  LSRNTPLLVQLFFIY-----------FGLPRVGVKWSGETCAVVGLVFLGGAYMAEALRA 144

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL +V   Q E+A +LGL+  +  R V LPQA+   +PPL +  + L+K +S+   V   
Sbjct: 145 GLDSVAPIQWESAASLGLSPAQVLRFVALPQALAVSVPPLAANTIFLIKETSVVSVVALP 204

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           DLV V   +I  +    E +++ +  YL + + ++
Sbjct: 205 DLVYVAKDLIGISYNTSEALVLLVASYLVVLLPVS 239



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA       V T  +A  G+  +  +G +  A       ++  I   YVE+ RN P LV 
Sbjct: 46  YAPLYAKAAVLTVKIAAIGIAGSLAVGLVCAAVTQFRIPVIGRIVTAYVELSRNTPLLVQ 105

Query: 145 IFFLYKSVLSV 155
           +FF+Y  +  V
Sbjct: 106 LFFIYFGLPRV 116


>gi|110635477|ref|YP_675685.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110286461|gb|ABG64520.1| amino acid ABC transporter membrane protein, PAAT family
           [Chelativorans sp. BNC1]
          Length = 295

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 14/218 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT---GKALPLLYISTFLIFGLPTLVLIA 239
              N  IFV + +  +V  L    ++R    KT    +A+  LY   F          I 
Sbjct: 87  FWVNIYIFVVAEICVLVWGLIV-AVARLIPGKTAAPIRAIATLYTDIFRGMPA-----II 140

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             Y + F  P+ G       S          IAL+    A++AE+ R+G+ ++   Q+ A
Sbjct: 141 TIYLIGFGLPLSGLPILKDLSVE----TYAIIALTLTFGAYVAEVYRAGIESIHWSQVAA 196

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGLT+ +  R V++PQA+R I+PPL + ++ L K+++L   +G  D  +    + + 
Sbjct: 197 ARSLGLTYMQTMRYVIVPQAVRRIVPPLLNDFIGLQKDTALVNVIGSIDAFNQAKILSSN 256

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               +  + +  F+++ ++I  A F++R+  +   + +
Sbjct: 257 YFN-LSPVTVVAFLFVVITIPQARFVDRILEREQRRTR 293


>gi|313107729|ref|ZP_07793911.1| hypothetical protein PA39016_001060056 [Pseudomonas aeruginosa
           39016]
 gi|187939706|gb|ACD38848.1| polar amino acid uptake transporter family protein [Pseudomonas
           aeruginosa]
 gi|310880413|gb|EFQ39007.1| hypothetical protein PA39016_001060056 [Pseudomonas aeruginosa
           39016]
          Length = 221

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 16/226 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVL----SLFATRLSRHFHEKTGKALPLLYISTFLI 229
             L F    +         +F LG  L    + F   L R+   +  K   +L++  F  
Sbjct: 5   FTLVFAYWHVLLKGLGLTLAFTLGCALLGSLAGFGLALLRNVRSRLLKVPAILFVEFF-- 62

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ +   + + F  PV+   +        P ++S+ I+L+ +  A  +E  R  L
Sbjct: 63  RGTPLLIQL---FWVFFCFPVVFGLDI-------PPYVSVAISLTLFMTAITSETFRGAL 112

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++   Q +A +ALGLT R     V+ PQA+   +PPL S  ++L K S+L  +VG ADL
Sbjct: 113 KSIAAEQHDACVALGLTMRVKVFYVVFPQALLRAVPPLLSNLVSLFKESALISSVGVADL 172

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + VG  I N T + +E +     IY  ++  +   +  + A++  +
Sbjct: 173 MFVGQNISNSTARPVEFLSAVAVIYFLVAFPLTRLVGVVEARMLRR 218



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 34/80 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +T   +Y   +L G   T        +  ++ G  +   R   ++L+     ++VE F
Sbjct: 3   LDFTLVFAYWHVLLKGLGLTLAFTLGCALLGSLAGFGLALLRNVRSRLLKVPAILFVEFF 62

Query: 137 RNIPPLVVIFFLYKSVLSVL 156
           R  P L+ +F+++     V 
Sbjct: 63  RGTPLLIQLFWVFFCFPVVF 82


>gi|241206674|ref|YP_002977770.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860564|gb|ACS58231.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 222

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 14/215 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
               G+        T   + V + VLGIVLS+     +R       + +  LY+   ++ 
Sbjct: 9   WLWDGMGALAYGACTTLALTVSTSVLGIVLSILGAA-ARRGPYPWLRKVVGLYVE--IMR 65

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P LV +   +           F             +  +A++   AA+  E+V +GL 
Sbjct: 66  NTPFLVQLFFIF-----------FGLPSLGIRLDPITAAVLAMTLNMAAYTIEVVGAGLD 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PRGQ EAA ALGL  R     ++LPQA+  I P LTSQ + ++  S++   +   +L 
Sbjct: 115 AIPRGQKEAAQALGLRPRLVFFKIILPQAIAIIFPALTSQIIIMMLESAVVSQISVRELA 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                + ++T ++ E  L+   IYLS+S  +   +
Sbjct: 175 QEADLLQSRTFRSFETYLVATLIYLSMSAALRRLL 209



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 4/114 (3%)

Query: 79  YTSDSSYAT----AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           Y+ D ++      A+  G   T  L  S  +   ++  L  A R      +  +  +YVE
Sbjct: 3   YSLDFNWLWDGMGALAYGACTTLALTVSTSVLGIVLSILGAAARRGPYPWLRKVVGLYVE 62

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + RN P LV +FF++  + S+    D        M LN    +   +    +A 
Sbjct: 63  IMRNTPFLVQLFFIFFGLPSLGIRLDPITAAVLAMTLNMAAYTIEVVGAGLDAI 116


>gi|126653498|ref|ZP_01725591.1| putative amino acid ABC transporter, permease protein [Bacillus sp.
           B14905]
 gi|126589776|gb|EAZ83910.1| putative amino acid ABC transporter, permease protein [Bacillus sp.
           B14905]
          Length = 253

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 9/239 (3%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
             +   F        +      +     +   S VLG +  L     ++    K  + L 
Sbjct: 17  EEMDKYFDATYIWSAIPVLLPFLKITFLVAGSSIVLGTIFGLLLAA-AKLSSVKLLRKLA 75

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            LY  T ++   P++VL+ L Y   +  P L +   +   ++    + + +  +   AA 
Sbjct: 76  NLY--TTIMRCTPSIVLLFLVY---YGVPALAENFGLNLHSIETA-IFVVVTFTLQFAAI 129

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++E++RS  +A+P+GQ EAA+++GLT  +A R ++ PQA+   +P   +  + LL+  +L
Sbjct: 130 MSEVMRSAYLAIPKGQFEAAVSVGLTPIQAYRRIIFPQALVVALPNFGNGMIALLQEGAL 189

Query: 341 AVAVGFADLVSVGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A  +G  D+V     II       A+EI +    IY  LSI+I      L       +K
Sbjct: 190 AYTIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIIIEKIFTILEKIFGRGKK 248



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 37/71 (52%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +L     TF +A S ++  TI G L+ A +LS+ KL+  +  +Y  + R  P +
Sbjct: 29  WSAIPVLLPFLKITFLVAGSSIVLGTIFGLLLAAAKLSSVKLLRKLANLYTTIMRCTPSI 88

Query: 143 VVIFFLYKSVL 153
           V++F +Y  V 
Sbjct: 89  VLLFLVYYGVP 99


>gi|89091826|ref|ZP_01164781.1| hypothetical protein MED92_06661 [Oceanospirillum sp. MED92]
 gi|89083561|gb|EAR62778.1| hypothetical protein MED92_06661 [Oceanospirillum sp. MED92]
          Length = 221

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 96/209 (45%), Gaps = 14/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + V S VLGI +++F   +++  + K    + + +I   +    P L  I + Y 
Sbjct: 22  FVTLHVSVLSMVLGIAIAVFL-AIAKMNNTKPFNYVAVGWIE--IARNTPALFQIYMAY- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F           +M++  AL    A ++AE  R G  ++P  Q  A+ +L
Sbjct: 78  ----------FGLGAFGIHLSPYMAVLSALVFINAGYLAETFRGGFQSIPDAQYNASKSL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R ++LPQ  R I  P+T+Q++  +  SSL + VG ++L      + + + + 
Sbjct: 128 GMTSFQTYRYIILPQMFRRIYHPMTNQFVWSILMSSLGILVGMSELSGETQRLQSLSFRT 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +E  ++   +Y  ++  + +  + L+ ++
Sbjct: 188 LEFFIVTAVLYYIITKFVLICASLLSKRL 216



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 29/70 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   M+    I   +   +++  K   ++   ++E+ RN P L  I+  
Sbjct: 17  LLQGAFVTLHVSVLSMVLGIAIAVFLAIAKMNNTKPFNYVAVGWIEIARNTPALFQIYMA 76

Query: 149 YKSVLSVLPI 158
           Y  + +    
Sbjct: 77  YFGLGAFGIH 86


>gi|319948859|ref|ZP_08022972.1| ABC amino acid transporter, permease component [Dietzia cinnamea
           P4]
 gi|319437461|gb|EFV92468.1| ABC amino acid transporter, permease component [Dietzia cinnamea
           P4]
          Length = 243

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 11/162 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G   LV +   + L F  P+L       G  + P F    +AL     A+ AE+VR 
Sbjct: 61  FFRGTSLLVQL---FWLFFVLPLL-------GYELDPLF-CGILALGLNYGAYAAEVVRG 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L AVP  Q EAA+AL  T  +    ++ PQA   +IPPL +  + LLK S+LA  +   
Sbjct: 110 SLAAVPAPQWEAALALNFTSWQRLYRIVFPQAWVQMIPPLNNLLIQLLKGSALASFILLQ 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           DL    G +   TG  +    I + +Y  ++ ++ LFMN L 
Sbjct: 170 DLTFHIGELRRVTGDTVFAFGIGLVLYFLIAYVLTLFMNMLE 211


>gi|189184716|ref|YP_001938501.1| probable glutamine transport system permease protein GlnP [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181487|dbj|BAG41267.1| probable glutamine transport system permease protein GlnP [Orientia
           tsutsugamushi str. Ikeda]
          Length = 205

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 22/200 (11%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F F++ ++L++     SR    K  K    +YIS F   G P ++ + + Y    
Sbjct: 17  FSAVCFGFIIAVLLTV-----SRMSKYKLLKFGANIYISVF--RGTPLIIQLYVIYF--- 66

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          +S  F +  +  S  + A++AEI++SG+ +V + Q+EAA+AL + 
Sbjct: 67  ------------SFKLSNVFYAGVLVFSLNSGAYVAEIIKSGINSVDKWQIEAALALNIP 114

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +    + ++LPQA+R IIP L ++ +NLLK SS+   +G  DL+     +   T      
Sbjct: 115 YFYIMKDIVLPQALRKIIPSLVNEVINLLKESSIISVLGGMDLMGRAKILSQATYDFFTP 174

Query: 367 ILIWMFIYLSLSIMIALFMN 386
           ++     Y  L ++++    
Sbjct: 175 MISVALCYYILVLILSFLAQ 194



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 33/64 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I +G   T   AFS +    II  L+   R+S  KL+ +   +Y+ VFR  P ++ ++ +
Sbjct: 5   IALGIPVTLQYAFSAVCFGFIIAVLLTVSRMSKYKLLKFGANIYISVFRGTPLIIQLYVI 64

Query: 149 YKSV 152
           Y S 
Sbjct: 65  YFSF 68


>gi|222080930|ref|YP_002540293.1| octopine ABC transporter [Agrobacterium radiobacter K84]
 gi|221725609|gb|ACM28698.1| octopine ABC transporter [Agrobacterium radiobacter K84]
          Length = 224

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 104/224 (46%), Gaps = 14/224 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L +       + ++ V +F  G+V+  FA  ++R+        L   Y+  F     P 
Sbjct: 13  YLPYLIGGALLSLELSVLAFAGGMVIG-FALAIARNEGGPILSRLVRAYVVFFT--NTPQ 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   Y + F  P L          V   F ++ I ++    A++ EI+R+GL +V +
Sbjct: 70  LVQI---YVIFFGLPDL--------GVVFSPFAAVLIGMTLNAGAYLTEILRAGLASVHQ 118

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            +++AA  LG++  ++ R V++P   R  +PPL++QY+ +   +S+A   G  +L     
Sbjct: 119 EELDAAETLGMSRLQSLRYVIVPHVFRVAMPPLSNQYILMTLGTSMAAVFGVEELTGRAF 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            + + T ++IEI      +Y+ ++ M  + +  +   +     +
Sbjct: 179 NVNSTTFRSIEIFTTIAGLYVVITFMATILLAVVGRYVFRARVR 222



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 42/96 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y+  +SY   ++ G + +  L+        +IG  +   R     +++ + R YV  F
Sbjct: 5   LHYSQITSYLPYLIGGALLSLELSVLAFAGGMVIGFALAIARNEGGPILSRLVRAYVVFF 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            N P LV I+ ++  +  +  +      +  GM LN
Sbjct: 65  TNTPQLVQIYVIFFGLPDLGVVFSPFAAVLIGMTLN 100


>gi|118473702|ref|YP_887060.1| glutamate permease [Mycobacterium smegmatis str. MC2 155]
 gi|118174989|gb|ABK75885.1| glutamate permease [Mycobacterium smegmatis str. MC2 155]
          Length = 226

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 6/226 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +   +    T+       V + +LG VL+       R         +   Y++     
Sbjct: 7   YRDEIFAAFWTTIQLTVYSAVGALILGTVLAAM-----RLAPVPVMNWMGTAYVNVVRNT 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L TL+++   + +     +         S     F    + L+ YTA+F+ E +RSG+ 
Sbjct: 62  PL-TLIILFCSFGVGQTLRITLVDPNSPTSIADSNFRLAVLGLTVYTASFVCETIRSGVN 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP GQ EAA +LG T  +  R +LLPQA R++I PL S  + L+KN+++A A+G A+  
Sbjct: 121 TVPLGQAEAARSLGFTFGQNLRYILLPQAFRAVIIPLGSVLIALIKNTTIASAIGVAEAA 180

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +I  T   + +  I    ++ L++ + LF   L  ++A+  
Sbjct: 181 LLMKAMIENTAALLTVGTIMALGFILLTLPVGLFFGWLGKRLAVAR 226



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 32/73 (43%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   I   F  T  L     + A I+GT++ A RL+   ++ W+   YV V RN P  
Sbjct: 5   DEYRDEIFAAFWTTIQLTVYSAVGALILGTVLAAMRLAPVPVMNWMGTAYVNVVRNTPLT 64

Query: 143 VVIFFLYKSVLSV 155
           ++I F    V   
Sbjct: 65  LIILFCSFGVGQT 77


>gi|89897021|ref|YP_520508.1| hypothetical protein DSY4275 [Desulfitobacterium hafniense Y51]
 gi|219667106|ref|YP_002457541.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|89336469|dbj|BAE86064.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219537366|gb|ACL19105.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 215

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 112/232 (48%), Gaps = 26/232 (11%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F  ++          T+       V SFV+G +L +     +R+        L  +YI  
Sbjct: 5   FQPYVFRFLAEGLMTTLYIAGMTIVLSFVVGTILGI-----ARYSKNPILAPLAAIYIE- 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            ++  +P L+ I +   +   +PV                 +  +A++ +T+A IAE+VR
Sbjct: 59  -VVRNIPLLLFILMFRFMTRLEPVN----------------AGILAMTVFTSAIIAEVVR 101

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL ++ +GQ EAA + GL++ +  R ++LPQA+R +IPPL SQ++ ++K++S   AVG 
Sbjct: 102 GGLNSIDKGQWEAAKSQGLSYVQILRYIILPQALRKMIPPLVSQFITVVKDTSYVWAVGI 161

Query: 347 ADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +L   G  I+ Q   T Q   +  +    Y  L+  +++      A+ A++
Sbjct: 162 EELTGKGLIIMGQFGSTPQVFTLFGMIALTYFVLNYALSVIARNQQARSAMQ 213



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 36/63 (57%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G + T ++A   ++ + ++GT++G  R S N ++A +  +Y+EV RNIP L+ I
Sbjct: 10  FRFLAEGLMTTLYIAGMTIVLSFVVGTILGIARYSKNPILAPLAAIYIEVVRNIPLLLFI 69

Query: 146 FFL 148
              
Sbjct: 70  LMF 72


>gi|163739218|ref|ZP_02146630.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
 gi|161387618|gb|EDQ11975.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis BS107]
          Length = 258

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 101/232 (43%), Gaps = 9/232 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                         + T   I V + +LG  L++    L++            ++ +  +
Sbjct: 32  WDWIPTYAPLALEGLWTTIWILVVTSILGFALAVPLG-LAQAVGPWYLSTPARIFCT--V 88

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEI 284
           I G P L+ I L Y  +    +  QF +I  S + P     +    +AL+   A +  E+
Sbjct: 89  IRGTPLLLQIWLLY--YGLGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGEV 146

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R     V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   +
Sbjct: 147 MRGAFSGVAKGQLEAAKAYGMPRLTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVATI 206

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D+ +V   + + T    E +L+   +Y++++ +I L   R   ++  + 
Sbjct: 207 TVLDIYAVSSRVRSDTFIVYEPLLLLALVYMAIAGVITLAFKRFEDRVPQRR 258



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 33/94 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +YA   L G   T W+     I    +   +G  +      ++   R++  V R  P L+
Sbjct: 37  TYAPLALEGLWTTIWILVVTSILGFALAVPLGLAQAVGPWYLSTPARIFCTVIRGTPLLL 96

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            I+ LY  + S+ P            +L      
Sbjct: 97  QIWLLYYGLGSLFPQFPWIRSSELWPYLRQAWPY 130


>gi|330939241|gb|EGH42644.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 216

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y L F  P+             P   +  I L CY AA+IAE  R  +  +P GQ
Sbjct: 67  LMVQLYVLFFALPL--------AGITFPAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL        R ++LPQA++ ++P L +  + + K + L   +   +L      I
Sbjct: 119 WEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQI 178

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T +  E   +   ++L++S+  +L    L  +
Sbjct: 179 AGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 213


>gi|313905462|ref|ZP_07838826.1| polar amino acid ABC transporter, inner membrane subunit
           [Eubacterium cellulosolvens 6]
 gi|313469646|gb|EFR64984.1| polar amino acid ABC transporter, inner membrane subunit
           [Eubacterium cellulosolvens 6]
          Length = 218

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 83/168 (49%), Gaps = 5/168 (2%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            ++I G P ++ + + +      P L       G  +S  F++  +A     + + +EI 
Sbjct: 53  IWVIRGTPLMLQLYVIFY----GPGLLGHPVWNGLGLSGRFIAALVAFVINYSCYFSEIY 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ ++P GQ EA   LG+T  +  R V+L Q ++ I+PP++++ + L+K++SLA  + 
Sbjct: 109 RGGIQSIPVGQYEAGQVLGMTKGQIFREVVLLQVIKRIVPPMSNEIITLVKDTSLANVIS 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A+++  G       G    +       YL  S ++ +  + +  K++
Sbjct: 169 VAEIIFTGNAFSKSNGLIWPLFYT-GVFYLLFSGVLTMAFSFIEKKLS 215


>gi|289672940|ref|ZP_06493830.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 216

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y L F  P+             P   +  I L CY AA+IAE  R  +  +P GQ
Sbjct: 67  LMVQLYVLFFALPL--------AGITFPAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL        R ++LPQA++ ++P L +  + + K + L   +   +L      I
Sbjct: 119 WEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQI 178

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T +  E   +   ++L++S+  +L    L  +
Sbjct: 179 AGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 213


>gi|260550581|ref|ZP_05824790.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           RUH2624]
 gi|260406292|gb|EEW99775.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           RUH2624]
          Length = 219

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTG 216
            +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  
Sbjct: 1   MNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL +GLP L                              F    I L+  
Sbjct: 61  RNTPLLIQLFFLYYGLPKL------------------------GIKIDGFTCGVIGLTFL 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K
Sbjct: 97  GGSYMAEAFRAGLQSVAKGQIDSAKSIGLQPIQIFRYVIFPQALAISIPAIGANCLFLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  +
Sbjct: 157 ESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLEHR 211


>gi|221198892|ref|ZP_03571937.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2M]
 gi|221205152|ref|ZP_03578168.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221174943|gb|EEE07374.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2]
 gi|221181343|gb|EEE13745.1| histidine transport system permease protein HisQ [Burkholderia
           multivorans CGD2M]
          Length = 240

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 1/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   + +    +   A   ++    ++ + L  LY + F       LV+    +  
Sbjct: 23  LMTVALTLAALAVGAVIGAAIAAAKLSRYRSARLLGDLYTTVFR-GVPELLVIYLFYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ+    G    P F+   +A+   + A+ AE+ R+ ++AV +G++EAA ++G
Sbjct: 82  STLVTAVGQWFGAEGFIGVPPFVIGALAVGMISGAYQAEVYRAAVLAVSKGELEAARSIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +L+PQ +R  +P + + +   LK+S+L    G A+L+       N T Q  
Sbjct: 142 MPRSMVLRRILVPQVLRFALPGIGNVWQLSLKDSALISVTGLAELLRTSQIAANSTHQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL ++ +     NR  A +    ++
Sbjct: 202 VFFVAGGALYLLMTGLSNRVFNRAEAIVGRSFRR 235


>gi|319780314|ref|YP_004139790.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166202|gb|ADV09740.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 218

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 14/201 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   +   + + G +LS+      R+      +A+        ++   P LV +   +  
Sbjct: 19  TTILLIAVTTLAGTLLSILGAAGRRNGPVLLKRAIA---CYVEVMRNTPFLVQLFFIF-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F            ++  +A++   AA+  EIV +GL AVP GQ EAA+ALG
Sbjct: 74  ---------FGLPSLGVRLDPLLAAMLAMTLNMAAYTIEIVGAGLDAVPGGQTEAALALG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+    ++LPQA++ I P LTSQ + ++  S++   +   +L      +  +T ++ 
Sbjct: 125 LRPRQVFVKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTYEADMLQARTFRSF 184

Query: 365 EIILIWMFIYLSLSIMIALFM 385
           E   +   +YL+LS+ +   +
Sbjct: 185 ETYFVVTLVYLALSMALRRLL 205



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 40/96 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L     +  T++  L  AGR +   L+      YVEV RN P LV +FF++  
Sbjct: 16  GAATTILLIAVTTLAGTLLSILGAAGRRNGPVLLKRAIACYVEVMRNTPFLVQLFFIFFG 75

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + S+    D  +     M LN    +   +    +A
Sbjct: 76  LPSLGVRLDPLLAAMLAMTLNMAAYTIEIVGAGLDA 111


>gi|315182021|gb|ADT88934.1| hypothetical transmembrane permease component of ABC transporter
           [Vibrio furnissii NCTC 11218]
          Length = 239

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 5/209 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI   S  L  +L+L    L R    +  +     +IS F   G P +  + L Y 
Sbjct: 17  WMTLKITFISVSLAALLAL-PMSLLRIQRARVYRWPVQWFISFF--RGTPLIAQLFLLYY 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
               +                 F    +A +  + A+  EI+R  + +V  G++EAA ++
Sbjct: 74  GS-GQFRPWLMEMGLWHFFRDPFNCALLAFTFNSLAYQTEILRGAIQSVDAGEIEAAKSM 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+ +    R ++LP A R   P L ++ + +LK  ++A  +   DL+       +QT   
Sbjct: 133 GMNNSLLYRHIVLPLAYRIAFPALGNECILMLKGGAVASVITVMDLMGQTRRAFSQTFD- 191

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I    +   +YL ++ +  +   +    +
Sbjct: 192 ISTYFLAAGLYLIIATVFVMVWRQAERYL 220



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  +  A ++   +   R+   ++  W  + ++  FR  P +  +F L
Sbjct: 12  LLDGAWMTLKITFISVSLAALLALPMSLLRIQRARVYRWPVQWFISFFRGTPLIAQLFLL 71

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y       P      +  F 
Sbjct: 72  YYGSGQFRPWLMEMGLWHFF 91


>gi|116254852|ref|YP_770688.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259500|emb|CAK10638.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 229

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 17/240 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTG 216
           +   +        L+    T+       VF F + I L+         TRL    +    
Sbjct: 1   MNFTWISSYWPLLLTGAWQTVCLLVISVVFGFAIAIGLAFAQVSGGRLTRLLARSYCTFF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL     L +G+ +L+ +    +     P+L +  F              ++ +  
Sbjct: 61  RGTPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFF-----------AAVSFTLN 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AE++R  L+AVP+G++EA  A GL+     R + LP+A+R  +P +  + +  LK
Sbjct: 110 YAAYEAEVLRGALLAVPKGELEAGRAFGLSPWMLIRRIWLPRAIRIALPTIAGEIVMQLK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + LA  V   DL +V   +   T    E +L+    YL+L+ +IA     L A++ ++ 
Sbjct: 170 ATPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRSLEAQVPVRR 229



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 40/110 (36%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  SSY   +L G   T  L    ++    I   +   ++S  +L   + R Y   FR 
Sbjct: 3   FTWISSYWPLLLTGAWQTVCLLVISVVFGFAIAIGLAFAQVSGGRLTRLLARSYCTFFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P L+ ++ LY  V S+LP+        F   L               A 
Sbjct: 63  TPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAA 112


>gi|319407362|emb|CBI81009.1| ABC transporter, permease protein [Bartonella sp. 1-1C]
          Length = 235

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 5/215 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                K+   S  +G++L +  T   R  + K  + L   YI  F     P L  + L Y
Sbjct: 26  FIVTLKLVSISCSIGLLLGILIT-FIRLSNNKPLQYLARAYIYFF--RSSPLLAQLFLFY 82

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                     Q   +     +  +  L+I  S  +AA+ AEI R  L+AV   Q EA+ A
Sbjct: 83  YGLGSLSSFWQQIGLWWFFQNAWYCCLFI-FSLNSAAYQAEIFRGSLLAVAAEQREASKA 141

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL        ++ PQAM   + PL ++++ + K+S++A  V   DL+     I ++T  
Sbjct: 142 LGLNRSTIFFKIIFPQAMVVALRPLGNEFILMTKSSAIASLVTVYDLMGTTKLIYSRTFD 201

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             ++ +    IYL +  +I   +  +   +    +
Sbjct: 202 -FQVYVWAAIIYLIIVELIHRIIILIEHYLTRYLR 235



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y+  +  GF+ T  L         ++G L+   RLS NK + ++ R Y+  FR+ P L 
Sbjct: 17  RYSLKLFDGFIVTLKLVSISCSIGLLLGILITFIRLSNNKPLQYLARAYIYFFRSSPLLA 76

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +F  Y  + S+        +  +  F N         ++++ A
Sbjct: 77  QLFLFYYGLGSL--SSFWQQIGLWWFFQNAWYCCLFIFSLNSAA 118


>gi|298291226|ref|YP_003693165.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927737|gb|ADH88546.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 285

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 91/263 (34%), Gaps = 12/263 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R  P   ++F    ++ +              + +  +           N  I + +  +
Sbjct: 31  RLAPVHALLFGAGLALFAGTAWAQADNAQLPPLEVIVKWAPLLLSGFAFNILISMIAMAI 90

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G    L    L           +       F     P LVL+     L     V  Q   
Sbjct: 91  GTGAGLGVG-LGMISENPLLARICWALTQFF--RNAPWLVLLFFVMFL-----VPFQVTI 142

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G     P+++   +  S    A +AEIVR  + +VP  Q EAA +L  T R+    ++L
Sbjct: 143 FGVQIPLPDWVKATVGFSLPVMANVAEIVRGAVRSVPSTQWEAAESLAFTPRQTMWRIIL 202

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-LVSVGGTIINQTGQA---IEIILIWMF 372
           PQ ++ ++PP  + Y  +   +  A  VG ++ L         + G+      +    +F
Sbjct: 203 PQCVKRMLPPWMNLYSLVTMATVQASIVGVSEMLTLTAQVHTAEGGRPELFAPLYGFALF 262

Query: 373 IYLSLSIMIALFMNRLNAKIALK 395
            +      I  F  RL  +  ++
Sbjct: 263 CFFLYCYPIDRFTARLERRFHIR 285



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 41/85 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  +L GF     ++   M   T  G  VG G +S N L+A IC    + FRN P LV+
Sbjct: 69  WAPLLLSGFAFNILISMIAMAIGTGAGLGVGLGMISENPLLARICWALTQFFRNAPWLVL 128

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +FF+   V   + I    I LP  +
Sbjct: 129 LFFVMFLVPFQVTIFGVQIPLPDWV 153


>gi|297199925|ref|ZP_06917322.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
 gi|197710393|gb|EDY54427.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Streptomyces
           sviceus ATCC 29083]
          Length = 231

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 13/223 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +         + T  ++  FS +L   +S     ++R       + L   Y   F   
Sbjct: 1   MTSGLWELVFKGIWTTVQLLFFSAILAAAVSFVVG-VARTHRLWIVRFLAGFYTEVF--R 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G   LV+I   + + F  P    +  +          +  +AL     A+ +EIVR  L 
Sbjct: 58  GTSALVMI---FWVFFVLPPAFGWQLV-------PMWAGTLALGLTYGAYGSEIVRGALG 107

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV   Q E  IAL  T  +  RL+LLPQA+  +IPP ++  + LLK ++L   +G  DL 
Sbjct: 108 AVDPAQQEGGIALSFTPWQRMRLILLPQAVPEMIPPFSNLLIELLKGTALVSVMGMGDLA 167

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  +     ++  I    + IY  ++ ++   M  L  K+ 
Sbjct: 168 FSGNLVRLALQESAGIYTYLLLIYFVIAFLLTRLMRGLEKKLK 210



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T  L F   I A  +  +VG  R     +V ++   Y EVFR    LV+I
Sbjct: 6   WELVFKGIWTTVQLLFFSAILAAAVSFVVGVARTHRLWIVRFLAGFYTEVFRGTSALVMI 65

Query: 146 FFLYKSVLSVLPIPDHSIV 164
           F+++  +          + 
Sbjct: 66  FWVFFVLPPAFGWQLVPMW 84


>gi|167902770|ref|ZP_02489975.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei NCTC 13177]
          Length = 262

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 78  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 130

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 131 HAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 190

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 191 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 227


>gi|319942092|ref|ZP_08016411.1| hypothetical protein HMPREF9464_01630 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804476|gb|EFW01354.1| hypothetical protein HMPREF9464_01630 [Sutterella wadsworthensis
           3_1_45B]
          Length = 220

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 91/228 (39%), Gaps = 14/228 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              +    + L           ++     +L + +    T ++R++         ++Y  
Sbjct: 1   MLDLAFMGKVLPLYYEGALLTLRVGAIGILLALAVG-MVTAVARYWRIPILNTAAVIYTE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                  P LV +   Y           F                I L+    +++AE +
Sbjct: 60  F--SRNTPLLVQLFFLY-----------FGLPKVGIRISGEWCAIIGLAFIGGSYMAEAL 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL +V   Q E+A  LGLT  +   LV+LPQA    +PPL +  + L+K  S+  A+ 
Sbjct: 107 RAGLESVSTVQTESARVLGLTPFQTMMLVVLPQAFAVSVPPLVANIIFLIKEISVVSAIA 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             DL+ V   +I  + +  E +++ +  Y+ L + I+L    L  K+ 
Sbjct: 167 LPDLMYVTKDLIGNSYKTDESLILLVSAYVVLLLPISLLGYWLEKKVR 214



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 34/100 (34%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +   G++ A  +G +    R     ++     +Y E  RN P LV +FFLY  
Sbjct: 17  GALLTLRVGAIGILLALAVGMVTAVARYWRIPILNTAAVIYTEFSRNTPLLVQLFFLYFG 76

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +  V            G+           L     +   V
Sbjct: 77  LPKVGIRISGEWCAIIGLAFIGGSYMAEALRAGLESVSTV 116


>gi|302337868|ref|YP_003803074.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301635053|gb|ADK80480.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 216

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 14/227 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +++  + L           KI  FS  + + L L    L+     K      ++   T +
Sbjct: 3   IYIIIQYLPDFLKAALETLKIAFFSACIALFLGLV---LATVNQAKIRLLSMIIDAYTII 59

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +   P LV +   Y +++  P+L              ++S  IA S  T A++ EI R G
Sbjct: 60  MRSTPLLVQL---YFIYYGLPLL--------GIQVNPYVSSVIAFSLNTGAYVVEIFRGG 108

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L  + +GQ  AA +LG+      R ++ PQ ++ +I PL SQ+  L+K++SLA  +   +
Sbjct: 109 LEGIDKGQFYAAYSLGMGWFACLRYIIFPQVLQRVIAPLLSQFSYLIKDTSLAAVLVVQE 168

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           L      + + T + +E ++I M IY  L I+  L       K A +
Sbjct: 169 LTYTYRNVSSSTYRPMEALVIPMIIYFLLYIVFRLASMSFETKKASR 215


>gi|300784267|ref|YP_003764558.1| amino acid ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299793781|gb|ADJ44156.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 286

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 18/267 (6%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
             +  +  LVV+ FL             +      +             + T       +
Sbjct: 18  RTYAVVGTLVVLAFLGYIGWRFYDSGQFTARKWEWLQYAQVQRDLGNAVLSTLQAFAAAA 77

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            +  I  ++FA    R       + +    +  F          + L +  +F  P +  
Sbjct: 78  VLALIFGAIFAA--GRLSDHAWVRGIAGFVVEFFRAIPA-----LILMFVFYFGLPTV-- 128

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                    +  F+ +   L+ Y  + +AE+ R+G+ ++P+GQ EAA ALG+   +   L
Sbjct: 129 ------GVPTSPFLGVVFGLTLYNGSVLAEVFRAGIQSLPKGQSEAAYALGMRKTQVMFL 182

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAI-EIILIW 370
           VLLPQA+R+++P + SQ + LLK+++L   + + +L+     I +Q   G+ I    ++ 
Sbjct: 183 VLLPQAVRAMLPTIISQLVVLLKDTALGFIITYQELLYYARYIGSQGTFGRPIVPSTIVA 242

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             IY+ + +++      L  +    +K
Sbjct: 243 TAIYVVMCLLLTALATYLERRNRRSKK 269



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 18/152 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R+   +  ++  L++     +                G  F             + Y  
Sbjct: 13  ARLRYRTYAVVGTLVVLAFLGYI---------------GWRFYDSGQFTARKWEWLQYAQ 57

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +    ++T     +  + A I G +  AGRLS +  V  I    VE FR IP 
Sbjct: 58  VQ---RDLGNAVLSTLQAFAAAAVLALIFGAIFAAGRLSDHAWVRGIAGFVVEFFRAIPA 114

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           L+++F  Y  + +V       + + FG+ L N
Sbjct: 115 LILMFVFYFGLPTVGVPTSPFLGVVFGLTLYN 146


>gi|251788515|ref|YP_003003236.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537136|gb|ACT05757.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 221

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 86/220 (39%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++   + + GI + +    L         +   L  +   LI   
Sbjct: 11  WPYWPELLAGLWVTVQLTTMATLGGIAIGICGAALRSGKPTFVSR---LWGLYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +               F   G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQLFFI-----------VFGLPGLGLKLTAGQAALLAMLVNLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA  LGL+  +    V+LP A++ I P L SQ + ++  SS+   V F +L   
Sbjct: 117 PKGQWEAARVLGLSRAQTFTRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSFEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I ++T  + E+ L+    YL LS+++   +     + 
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLCYLVLSMLMRQLLLLAGRRF 216



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 32/77 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G   T  L     +    IG    A R      V+ +  +YVE+ 
Sbjct: 5   LHFAALWPYWPELLAGLWVTVQLTTMATLGGIAIGICGAALRSGKPTFVSRLWGLYVELI 64

Query: 137 RNIPPLVVIFFLYKSVL 153
           RN P +V +FF+   + 
Sbjct: 65  RNTPFVVQLFFIVFGLP 81


>gi|242240069|ref|YP_002988250.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242132126|gb|ACS86428.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 240

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 4/230 (1%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F          +   T   + V + ++G   SL    ++        +      I + + 
Sbjct: 7   FSERGWGGLLLMAALTTLCLTVAALLIG---SLVGAAVAAAKLSSRRRWRVAGEIYSVVF 63

Query: 230 FGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            G+P L++I L Y         +G++    G    P F+   +A+   +A++  E+ R+ 
Sbjct: 64  RGIPELLIIYLFYFGGSGVLTQVGRWFGADGFIELPPFLIGALAIGLISASYQGEVYRAA 123

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
            +AV  G++EAA+A+G+   +    +LLPQ  R  +P L++ +   LK+S+L    G  +
Sbjct: 124 RLAVNAGELEAALAMGMPAWRRAYRILLPQVARYALPGLSNVWQMSLKDSALVSVTGIVE 183

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           ++         T Q     L    IYL L++   +   RL  K++   ++
Sbjct: 184 VMRASQMAAGSTRQYFLFYLAGAAIYLILTVFSNISFARLEQKMSQPHQR 233


>gi|227823544|ref|YP_002827517.1| putative permease component of ABC transporter protein
           [Sinorhizobium fredii NGR234]
 gi|227342546|gb|ACP26764.1| putative permease component of ABC transporter protein
           [Sinorhizobium fredii NGR234]
          Length = 220

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 13/227 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +     +         +    ++ V + ++G+VL  F   L         +   +L++
Sbjct: 1   MGYSFDFQSVSFGPLWEGLIVTLELTVAANLIGVVLG-FPLALLIMSRFAPVRLPAMLFV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F     P +V I   +       V   FN   GS          +AL     AF AE 
Sbjct: 60  EFF--RCTPAIVQIVWFFY-----CVPMLFNVFLGSMTM-----GILALGLNLMAFNAEA 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+ + AVPR Q++A IALGL   + T  ++LP A+R+ IP L +  + + + ++L   V
Sbjct: 108 YRAAIQAVPREQLDAGIALGLNPLQRTLYIVLPTAVRASIPVLLTNGIGIFQQTALVAIV 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL+    T+  +T + IE   I   +Y ++S  ++  +  L  +
Sbjct: 168 AVQDLMYQAKTLATETYRPIETFTIVALVYFAVSFPVSQIVGFLERR 214



 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 6/162 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L  +  +   ++G  +    +S    V     ++VE FR  P +V I + 
Sbjct: 15  LWEGLIVTLELTVAANLIGVVLGFPLALLIMSRFAPVRLPAMLFVEFFRCTPAIVQIVWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  V  +         +  G+      L          A   V    L   ++L    L 
Sbjct: 75  FYCVPMLF--NVFLGSMTMGILALGLNLMAFNAEAYRAAIQAVPREQLDAGIALGLNPLQ 132

Query: 209 RHFHE----KTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           R  +         ++P+L  +   IF    LV I     L +
Sbjct: 133 RTLYIVLPTAVRASIPVLLTNGIGIFQQTALVAIVAVQDLMY 174


>gi|218671516|ref|ZP_03521186.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli GR56]
          Length = 339

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 100/228 (43%), Gaps = 20/228 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +      SF LGI+L+L      R       + + +++I       L T+
Sbjct: 127 WGGLLVTLVLSFVGIAVSFPLGIILAL-----GRRSQMPVIRTVCIVFIEVVRGVPLITV 181

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A           +    F+       + +   I +S + +A++AE++R GL A+P+G
Sbjct: 182 LFMA----------SVMLPLFLPAGWTVDKLLRAIIGVSIFASAYMAEVIRGGLQAIPKG 231

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A +LGL + +  RLV++PQA++ +IP + + ++ + K++SL   +   DL+ +   
Sbjct: 232 QFEGADSLGLGYWQKMRLVIMPQAIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGIVRL 291

Query: 356 -----IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                        +  ++   F +      ++ +   +   +    K+
Sbjct: 292 NFVDPNWATAVTPLTGLIFAGFAFWLFCFGMSRYSAFVERHLDTGHKR 339



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +C V++EV R +P + V+F  
Sbjct: 126 LWGGLLVTLVLSFVGIAVSFPLGIILALGRRSQMPVIRTVCIVFIEVVRGVPLITVLFMA 185

Query: 149 YKSVLSVLPIPD 160
              +   LP   
Sbjct: 186 SVMLPLFLPAGW 197


>gi|84489758|ref|YP_447990.1| polar amino acid ABC transporter permease [Methanosphaera
           stadtmanae DSM 3091]
 gi|84373077|gb|ABC57347.1| predicted ABC-type polar amino acid transport system, permease
           protein [Methanosphaera stadtmanae DSM 3091]
          Length = 216

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 11/208 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  +IF+ + +  I L L      R    K  + +  +YIS  ++ G P ++ + + +  
Sbjct: 16  TTLEIFILTLLFAIPLGLVV-AWGRMSKIKPIQWIMRIYIS--VMRGTPLMLQLIVVFFG 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +       +     ++ S   +++ IA     AA+ AEI R G+ ++P+GQ EAA  LG
Sbjct: 73  PY-------YILGVSTSSSYRLIAVLIAFIINYAAYFAEIFRGGIESIPKGQYEAAQILG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +   +++LPQ  + ++P +T++ + L+K++SL+  +   +L +V   +      +I
Sbjct: 126 YTKMETFFIIILPQVFKIVLPSITNEVITLVKDTSLSFVLAIPELFTVAKQVAASEA-SI 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
             + I    Y  L+ ++A  M  L  K+
Sbjct: 185 LALFIAGIFYYILNAIVAFIMELLEKKL 212



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 35/68 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +  T ++ G + T  +    ++ A  +G +V  GR+S  K + WI R+Y+ V R  P ++
Sbjct: 5   TVLTELMGGLITTLEIFILTLLFAIPLGLVVAWGRMSKIKPIQWIMRIYISVMRGTPLML 64

Query: 144 VIFFLYKS 151
            +  ++  
Sbjct: 65  QLIVVFFG 72


>gi|56697875|ref|YP_168246.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56679612|gb|AAV96278.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 295

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 91/267 (34%), Gaps = 12/267 (4%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V     +PP  ++  L               +      L              N  I VF
Sbjct: 36  VRWLAGMPPQFILLLLLAWPTMAFAQTASYGMGDAFAALWRWIPFLTFQGFVFNVVISVF 95

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S ++G V    A  L +       + L       F       ++ I L            
Sbjct: 96  SMLIGTVAG-AALGLGQISRNNWLRRLSWGVTQLFRNAPWLVILFIVL-------LAFPF 147

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +F   G     P +M   I LS    A I+EIVR  +++VP  Q EAA +L  T  +   
Sbjct: 148 EFEIFGVVIPVPAWMKAVIGLSLPIMANISEIVRGAVMSVPSAQWEAAESLSFTRTQTLW 207

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-LVSVGGTIINQTGQA---IEIIL 368
            ++LPQ  + +IPP  + Y  L   + L   +G  + +      +  +  +    +    
Sbjct: 208 QIILPQCFKRMIPPWMNWYAILTMATPLCSMLGVGEIITFSRQAMEAENNRPELLVPFFG 267

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
             + ++ +    IA     L  + A+K
Sbjct: 268 YALVLFFAYCYPIARITIALEKRYAVK 294



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 16/193 (8%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F      +P+ +          GFV    ++   M+  T+ G  +G G++S N  +  + 
Sbjct: 71  FAALWRWIPFLT--------FQGFVFNVVISVFSMLIGTVAGAALGLGQISRNNWLRRLS 122

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
               ++FRN P LV++F +  +               FG+ +         + +      
Sbjct: 123 WGVTQLFRNAPWLVILFIVLLAFP--------FEFEIFGVVIPVPAWMKAVIGLSLPIMA 174

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +   V G V+S+ + +          +   L  I     F       +     L    P
Sbjct: 175 NISEIVRGAVMSVPSAQWEAAESLSFTRTQTLWQIILPQCFKRMIPPWMNWYAILTMATP 234

Query: 250 VLGQFNFIGGSTV 262
           +          T 
Sbjct: 235 LCSMLGVGEIITF 247


>gi|260222555|emb|CBA32233.1| hypothetical protein Csp_D31110 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 227

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 14/230 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHFHEKTGKALPLLYISTF 227
           +      L+    T+   A   V    LG+  +    R        +  +A+   Y+   
Sbjct: 11  LAEWPLLLTGVGWTLALTAVAVVAGTALGVGCAWVRARGFGADHAPRWLQAVVGGYVE-- 68

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           LI   P +V +   +           F             + +IA+     A+  EI+R+
Sbjct: 69  LIRNTPFIVQLFFIF-----------FGLPAAGFKLSAETASFIAMVINLGAYATEIIRA 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL A P+GQ+EAA++L L   +    V+LP A++ I P L SQ + ++  SS+   +   
Sbjct: 118 GLEATPKGQIEAAVSLALNRLQTFTYVVLPPALKKIWPSLISQVVIVMLGSSVCGQISTK 177

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +L      I +   ++ E  ++   +YL LS ++   +N L A      +
Sbjct: 178 ELSYAADLIQSNNFRSFEAFMVVGAVYLLLSFVVRHVLNWLGATFVFGRR 227



 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 6/109 (5%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGT------LVGAGRLSANKLVAWICRVYVEVFRNI 139
              +L G   T  L    ++  T +G         G G   A + +  +   YVE+ RN 
Sbjct: 14  WPLLLTGVGWTLALTAVAVVAGTALGVGCAWVRARGFGADHAPRWLQAVVGGYVELIRNT 73

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           P +V +FF++  + +              M +N    +   +     A 
Sbjct: 74  PFIVQLFFIFFGLPAAGFKLSAETASFIAMVINLGAYATEIIRAGLEAT 122


>gi|320458985|dbj|BAJ69606.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 311

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 14/242 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
              + +      + +      L    L +       V   +L  +++L   R SR     
Sbjct: 78  WPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALV--RTSRSPILF 135

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + L L+Y  T ++ G+P +V++   Y + F  P LG F  I  S +        IA+ 
Sbjct: 136 PLRILALIY--TTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVL------GTIAVV 184

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              +A+++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++
Sbjct: 185 MGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISM 244

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            K+  L   +G  D V      +  T       ++   +++ +S+   L  +    ++  
Sbjct: 245 QKDVGLISVLGAVDAVRAAQIDVASTYN-FTPYVVASLLFILMSVPFILLNDWYTERLRK 303

Query: 395 KE 396
           +E
Sbjct: 304 RE 305


>gi|307544953|ref|YP_003897432.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216977|emb|CBV42247.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 240

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 76/171 (44%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL   T +I  +P LVLI L Y    +           G      F +    ++    A+
Sbjct: 62  LLACYTTIIRAVPELVLILLLYFAMPEALNQLLAVAGLGEVEVSPFAAGIAVIALVQGAY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E++R  + A+P GQ+EAA +LG++  K  R + LP  +   +P L++ +L   K+++L
Sbjct: 122 ATEVMRGAIRAIPYGQIEAAYSLGMSTAKTFRRITLPAMLPGALPGLSNLWLIATKDTAL 181

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              VGF +L          T   +  +     +YL +S++  L    L  +
Sbjct: 182 LAVVGFTELTLAARQAAGATKHHLLFLCAAGVLYLLVSLISNLVFKALERR 232



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L G   +  +A  G +   +IG    AG+LS   ++  +   Y  + R +P LV+
Sbjct: 19  WGGALLDGLWLSLQVAGGGYLLGLLIGMAGAAGKLSGGPVIRDLLACYTTIIRAVPELVL 78

Query: 145 IFFLYKSVLSV 155
           I  LY ++   
Sbjct: 79  ILLLYFAMPEA 89


>gi|299133837|ref|ZP_07027031.1| polar amino acid ABC transporter, inner membrane subunit [Afipia
           sp. 1NLS2]
 gi|298591673|gb|EFI51874.1| polar amino acid ABC transporter, inner membrane subunit [Afipia
           sp. 1NLS2]
          Length = 454

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 18/256 (7%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATR 206
           ++ LS         ++   + L+  GL      +     + +   + GIV S+    A  
Sbjct: 208 RAGLSSALTFAGIAIVIVALRLDQGGLPVVDTRLWGGLLVTLVVSITGIVASMPVGIALA 267

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           L R       +   + +I  +    L T VL    Y L           F+ G       
Sbjct: 268 LGRTSRIPLLRIFCVAFIEFWRGVPLIT-VLFFATYMLPL---------FLPGDFTIDAL 317

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           + + + ++ +  A+ AE++R GL+A+PRGQ EAA ALGL++ K T L++LPQA+R +IP 
Sbjct: 318 VRVLVGIALFAGAYNAEVIRGGLLAIPRGQREAANALGLSYWKTTGLIVLPQALRHVIPA 377

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMI 381
           L + ++ L K+++L + V   DL+            A              IY      +
Sbjct: 378 LVNSFIALFKDTTLVLIVSLFDLLGQLRAAFADPTWATPTTLFTGFAFTGIIYWVGCFAM 437

Query: 382 ALFMNRLNAKIALKEK 397
           + +   +  ++    +
Sbjct: 438 SRYSLFVERRLNAHRQ 453


>gi|283954241|ref|ZP_06371765.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283794259|gb|EFC33004.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 449

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 106/235 (45%), Gaps = 14/235 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTG 216
           +   F +      L+   LT+  +    +FS ++G+   L      +        + +  
Sbjct: 1   MDFDFILAQAPVFLTAAWLTIKLSFFGIIFSLIIGLFCILMGYFKIKILENICKLYIEFS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           +  PLL    FL + LP       K+ +H +  P L         T+ P F    + LS 
Sbjct: 61  RNTPLLIQLFFLYYALP-------KFNIHLEQIPPLNLICLSVEETLRPSFACAIVGLSF 113

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              +++AE +R+G  A+ + Q EA +ALG +     R V+LPQA+   +P +++  + L+
Sbjct: 114 LGGSYMAESLRAGFEAIKKQQFEAGLALGFSKFGNLRYVILPQALAISMPSISANIIFLI 173

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           K +S+   +   DLV++  ++ + T +  E++ +    YL + + ++  + +   
Sbjct: 174 KETSVVSIIALPDLVNLMKSLNSLTYKTDELLFLLFMGYLCIILPLSFILLKFEK 228



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 101/256 (39%), Gaps = 17/256 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ + +L   +     +            LN   L      +    +I   S V+  +  
Sbjct: 207 LLFMGYLCIILPLSFILLKFEKGCFMLELLNTDTLLRLWQGLFITLEISFISIVITSIGG 266

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           LF   L       + K + +       +  +  + L+   + ++F  P    ++      
Sbjct: 267 LFLGILM------SFKNVYIYTFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDL----- 315

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                 +  I  S +    + ++VR  L ++P+ Q E+A +LGL   ++   V++PQA+R
Sbjct: 316 --GSVSAAIIVFSIWGCFEMMDLVRISLQSIPKHQYESASSLGLNTVQSFVYVIIPQAVR 373

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSL 377
            + P   +    ++K+++ A  +G  +LV VG  II            I  +  FI+ +L
Sbjct: 374 RLTPMSMNLLTRMIKSTTFAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFTL 433

Query: 378 SIMIALFMNRLNAKIA 393
              I L+  +L  K +
Sbjct: 434 CYPITLYSRKLEKKWS 449



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 36/79 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L     T  L+F G+I + IIG           K++  IC++Y+E  RN P L+ +FF
Sbjct: 12  VFLTAAWLTIKLSFFGIIFSLIIGLFCILMGYFKIKILENICKLYIEFSRNTPLLIQLFF 71

Query: 148 LYKSVLSVLPIPDHSIVLP 166
           LY ++       +    L 
Sbjct: 72  LYYALPKFNIHLEQIPPLN 90



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 1/89 (1%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           FE    ++   +  +    +  G   T  ++F  ++  +I G  +G      N  +   C
Sbjct: 226 FEKGCFMLELLNTDTLLR-LWQGLFITLEISFISIVITSIGGLFLGILMSFKNVYIYTFC 284

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           R+ +E  R +P LV +F +Y         
Sbjct: 285 RLGLEFVRVMPLLVWLFVVYFGFPRWFGW 313


>gi|270263424|ref|ZP_06191693.1| transporter [Serratia odorifera 4Rx13]
 gi|270042308|gb|EFA15403.1| transporter [Serratia odorifera 4Rx13]
          Length = 218

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 11/205 (5%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              + S       +L    L      K   A+  +   + L  G P L+ + L +     
Sbjct: 19  WTLLLSLTAFFGGTLVTLPLLLLRLSKRKWAMRFVRFYSELFQGTPLLMQLFLAF----- 73

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                 F           + +  +AL+ +T+AF+ +I    + A+P+GQ EA+  LGL+ 
Sbjct: 74  ------FGLALFGIDVSPWAAAALALTLFTSAFLVDIWSGSIAALPKGQWEASRCLGLSF 127

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    V++PQA+R  I P     + ++K ++LA  +GF +L   G  + N T Q  ++ 
Sbjct: 128 GQTLGRVIVPQAVRIAIAPTVGFSVQVIKGTALASIIGFIELTKAGTMLNNVTYQPFKVF 187

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
            +    Y  +   ++ + + L  K 
Sbjct: 188 GLVALGYFLMCYPLSRYSHYLEKKF 212


>gi|91781327|ref|YP_556534.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693987|gb|ABE37184.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 227

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 13/225 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            G            +              +G V+S       +       +    LYIS 
Sbjct: 1   MGFDPQVIHSLSTLIDGWLLTVELTLLGAIGSVVSGHLALALQLTRCAPLRWFARLYISF 60

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             + G P LV +   + L F  P++G    +GG       ++  + L   + A+ AEI+R
Sbjct: 61  --MRGTPALVQL---FMLFFTLPLIG----LGGR----PMLAAALTLGLNSGAYTAEILR 107

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L  V  GQ +AAIALG++  +    + LPQ +++ +P L +++  LLK + LA  V  
Sbjct: 108 GNLRVVTTGQYDAAIALGMSPSRIALRIALPQMLKASLPALINEFTILLKTTPLASVVAV 167

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L   G  +I +T  + +++L+    YL++++ +     R+  K
Sbjct: 168 TELTYAGQIVIARTYTSTQVMLLVSVGYLAVALPVIYAARRMQRK 212



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 3/126 (2%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            + ++ G++ T  L   G I + + G L  A +L+    + W  R+Y+   R  P LV +
Sbjct: 11  LSTLIDGWLLTVELTLLGAIGSVVSGHLALALQLTRCAPLRWFARLYISFMRGTPALVQL 70

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF---VFSFVLGIVLSL 202
           F L+ ++  +       +     + LN+   +   L  +           +  LG+  S 
Sbjct: 71  FMLFFTLPLIGLGGRPMLAAALTLGLNSGAYTAEILRGNLRVVTTGQYDAAIALGMSPSR 130

Query: 203 FATRLS 208
            A R++
Sbjct: 131 IALRIA 136


>gi|239503579|ref|ZP_04662889.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii AB900]
          Length = 219

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTG 216
            +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  
Sbjct: 1   MNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL +GLP L                              F    I L+  
Sbjct: 61  RNTPLLIQLFFLYYGLPKL------------------------GIKIDGFTCGVIGLTFL 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K
Sbjct: 97  GGSYMAEAFRAGLQSVAKGQIDSAKSIGLQPIQIFRYVVFPQALAISIPAIGANCLFLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  +
Sbjct: 157 ESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLEHR 211


>gi|292487347|ref|YP_003530219.1| putative ABC transporter inner membrane protein [Erwinia amylovora
           CFBP1430]
 gi|292898592|ref|YP_003537961.1| ABC transporter permease [Erwinia amylovora ATCC 49946]
 gi|291198440|emb|CBJ45548.1| ABC transporter, permease protein [Erwinia amylovora ATCC 49946]
 gi|291552766|emb|CBA19811.1| putative ABC transport system, inner membrane component [Erwinia
           amylovora CFBP1430]
          Length = 221

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 94/213 (44%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + V G+ L +    L      K   A  L  +   LI   
Sbjct: 11  WPFWPQLISGLWATIQLTVMATVGGVALGMVGAAL---RSGKPTLASRLWGVYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPNLGLKLTAGE--------AALLAMLINLGAYSTEIIRAGIRVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA  LGLT ++    V+LP AM+ I P L SQ + ++  SS+   V F +L   
Sbjct: 117 PKGQWEAARVLGLTRQQTFIRVVLPPAMKRIYPALVSQCIIVMLGSSVVSQVSFEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              I ++T  + E+ L+   +YL+LSI +   +
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLLYLALSIAMRQLL 209



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 38/96 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   +   ++ G   T  L     +    +G +  A R     L + +  VYVE+ 
Sbjct: 5   LNFPALWPFWPQLISGLWATIQLTVMATVGGVALGMVGAALRSGKPTLASRLWGVYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLIN 100


>gi|220929054|ref|YP_002505963.1| polar amino acid ABC transporter inner membrane subunit
           [Clostridium cellulolyticum H10]
 gi|219999382|gb|ACL75983.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulolyticum H10]
          Length = 248

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 8/219 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    +++       +F+ VLG++L+       +    +  + +  LYI   L   +P
Sbjct: 22  WILQGIQISLSLMLLSSLFAVVLGVLLTF-----GQLSKYRVIRFISFLYIE--LCRNIP 74

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +   Y + F +        +  +  +  F +    LS  ++ +I+EI+R G+  V 
Sbjct: 75  TLIWLLFFYYV-FPELFSEPIKTMLNNNQALNFWAAIAGLSISSSGYISEIIRGGISGVS 133

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           + Q+ AA  LG +  +    ++ PQA+R   PPL S+ ++ +KNSSLA+A+   ++V   
Sbjct: 134 KEQVSAARTLGHSQWEIWIYIIWPQAIRICFPPLVSRLIHNMKNSSLALALSVHEIVWAT 193

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I + T + IE  +I    +L ++ + +     +  + 
Sbjct: 194 QQIESITFRGIEATIIATLFFLCINYVFSRLGLSVEKRF 232



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 50/117 (42%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   IL G   +  L     + A ++G L+  G+LS  +++ +I  +Y+E+ RNIP 
Sbjct: 16  SGQYLEWILQGIQISLSLMLLSSLFAVVLGVLLTFGQLSKYRVIRFISFLYIELCRNIPT 75

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           L+ + F Y     +   P  +++           ++  +++        +   + G+
Sbjct: 76  LIWLLFFYYVFPELFSEPIKTMLNNNQALNFWAAIAGLSISSSGYISEIIRGGISGV 132


>gi|254255036|ref|ZP_04948353.1| ABC-type arginine/histidine transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124899681|gb|EAY71524.1| ABC-type arginine/histidine transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 236

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S VLG  L++    ++R   E+       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIVLGFALAVPL-AIARASSERWIAGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A      A+  EI    + A   G++EA +A G++
Sbjct: 84  SLQVVHDHVLLD-TFFRDAMNCTLLAFVLNECAYATEIFAGAIKATAAGEIEAGVAFGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    +++P A+R  +P  +++ + +L  ++LA      D++ V   + + T  + + 
Sbjct: 143 RVKLYTRIVVPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +Y  +   +     +L A+
Sbjct: 203 YGIAAVLYAVVVFALIWAFRKLEAR 227



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 65/218 (29%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    ++    +   +   R S+ + +A    +
Sbjct: 5   VSQYWQNYLYTDGYR---FSGLAITLWLLVVSIVLGFALAVPLAIARASSERWIAGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLDTFFRDAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATAAGEIEAGVAFGMSRVKLYTRIVVPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y     A I 
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAVVVFALIW 219


>gi|299770574|ref|YP_003732600.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. DR1]
 gi|298700662|gb|ADI91227.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. DR1]
          Length = 219

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTG 216
            +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  
Sbjct: 1   MNWQYIHSVLPQFFSATLTTLKISIISIILAILVGLICSILITYRVRVLNRIAQFYIELS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL +GLP L                              F    I L+  
Sbjct: 61  RNTPLLIQLFFLYYGLPKL------------------------GIKIDGFACGVIGLTFL 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K
Sbjct: 97  GGSYMAEAFRAGLQSVAKGQIDSAKSIGLQPIQIFRYVIFPQALAISIPAIGANCLFLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  +
Sbjct: 157 ESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLEHR 211


>gi|283833318|ref|ZP_06353059.1| transport and binding protein [Citrobacter youngae ATCC 29220]
 gi|291070956|gb|EFE09065.1| transport and binding protein [Citrobacter youngae ATCC 29220]
          Length = 261

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 14/238 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + +   L+ + L +      T   + +   VL  + ++    L R    +  KA+  
Sbjct: 1   MHAMDWQGVLSGQPLQWIISGFLTTLWVTLAGVVLATLFTILLLSL-RLTGNRFAKAVVG 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG-----------STVSPEFMSLY 270
           +++S F     P LV +   Y   ++        FI               ++PEF+   
Sbjct: 60  VWVSVF--RNTPLLVQLMFWYFAAWNWLPREMITFINAEHPWSVLPGDVWWLTPEFLCSA 117

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             L  +T+AF+ E V SGL AV  GQ EAA+A G +     R +LLPQ + +   P+  Q
Sbjct: 118 WGLGVFTSAFLIEEVSSGLQAVSGGQREAAVAQGFSAWAILRHILLPQGLANAWQPIVGQ 177

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           YLNL+K SSLA  +GFA+L      I +    A+E   +   +YL   I++ + + RL
Sbjct: 178 YLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLLTGIVLDILLTRL 235



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 41/73 (56%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ T W+  +G++ AT+   L+ + RL+ N+    +  V+V VFRN P LV +
Sbjct: 15  LQWIISGFLTTLWVTLAGVVLATLFTILLLSLRLTGNRFAKAVVGVWVSVFRNTPLLVQL 74

Query: 146 FFLYKSVLSVLPI 158
            F Y +  + LP 
Sbjct: 75  MFWYFAAWNWLPR 87


>gi|262278739|ref|ZP_06056524.1| amino acid ABC transporter membrane protein [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259090|gb|EEY77823.1| amino acid ABC transporter membrane protein [Acinetobacter
           calcoaceticus RUH2202]
          Length = 219

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTG 216
            +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  
Sbjct: 1   MNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL +GLP L                              F    I L+  
Sbjct: 61  RNTPLLIQLFFLYYGLPKL------------------------GIKIDGFACGVIGLTFL 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K
Sbjct: 97  GGSYMAEAFRAGLQSVAKGQIDSAKSIGLQPIQIFRYVIFPQALAISIPAIGANCLFLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  +
Sbjct: 157 ESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLEHR 211


>gi|167562818|ref|ZP_02355734.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia oklahomensis EO147]
          Length = 206

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 11/173 (6%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 22  IVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 74

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA++ + P   +Q+++L+K++SLA  VG
Sbjct: 75  HAGIRAAGAGQWQAGLSLGLTRWQTVRYVLLPQAVKIMTPSFVNQWVSLVKDTSLAYIVG 134

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +L  V   + N+      ++ L    IYL L   + +    L   +A + +
Sbjct: 135 VPELSFVATQVNNRLMVYPAQVFLFVGVIYLILCTALDVAATWL---LARRRR 184


>gi|241554175|ref|YP_002979388.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863481|gb|ACS61143.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 229

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 17/240 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTG 216
           +   +        L+    T+       VF F + I L+         TRL    +    
Sbjct: 1   MNFTWISSYWPLLLTGAWQTVCLLVISVVFGFAIAIGLAFAQVSGGRLTRLLARSYCTFF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL     L +G+ +L+ +    +     P+L +  F              ++ +  
Sbjct: 61  RGTPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFF-----------AAVSFTLN 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ AE++R  L+AVP+G++EA  A GL+     R + LP+A+R  +P +  + +  LK
Sbjct: 110 YAAYEAEVLRGALLAVPKGELEAGRAFGLSPWMLIRRIWLPRAIRIALPTIAGEIVMQLK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + LA  V   DL +V   +   T    E +L+    YL+L+ +IA     L A++ ++ 
Sbjct: 170 ATPLAFTVTVMDLYAVANKVRQDTLLVYEPLLVVTLFYLALTAVIARVFRGLEAQVPVRR 229



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 40/110 (36%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  SSY   +L G   T  L    ++    I   +   ++S  +L   + R Y   FR 
Sbjct: 3   FTWISSYWPLLLTGAWQTVCLLVISVVFGFAIAIGLAFAQVSGGRLTRLLARSYCTFFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P L+ ++ LY  V S+LP+        F   L               A 
Sbjct: 63  TPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAA 112


>gi|150395401|ref|YP_001325868.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150026916|gb|ABR59033.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 241

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/175 (26%), Positives = 77/175 (44%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL   T ++  +P LVLI L Y    D        F  G+      M+    +     A+
Sbjct: 62  LLECYTTVVRAVPELVLILLLYYAGTDLLNQVLGAFGIGTVDISGLMAGIFVIGVVQGAY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E++R  + AVP GQ+EAA A G++     R + LP  +   IP L + +L   K+++L
Sbjct: 122 STEVLRGAIKAVPAGQIEAARAYGMSPFMVLRRITLPAMLPYAIPGLANLWLIATKDTAL 181

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              VGF++L  V       T   +        +YL+L+++  +F+  L       
Sbjct: 182 LAVVGFSELTLVTRQAAGATKAYLLFFCAAGALYLALTLVSNVFIGMLERHARRG 236


>gi|15964315|ref|NP_384668.1| putative transport system permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307307051|ref|ZP_07586790.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15073492|emb|CAC45134.1| Amino-acid ABC transporter permease [Sinorhizobium meliloti 1021]
 gi|306901991|gb|EFN32590.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 241

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 3/209 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            +I V  + LG+ L +      + +     +   LL   T ++  +P LVLI L Y    
Sbjct: 31  IEIAVGGYALGLALGI-GGAFGKLYGGPVLRD--LLECYTTVVRAVPELVLILLLYYAGT 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G+      ++    +     A+  E++R  + AVP GQ+EAA A G++
Sbjct: 88  DLLNQLLGAIGVGAVDISGLVAGIFVIGVVQGAYSTEVLRGAIKAVPAGQIEAARAYGMS 147

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R + LP  +   IP L + +L   K+++L   VGF++L  V       T   +  
Sbjct: 148 PLLVLRRITLPAMLPYAIPGLANLWLIATKDTALLAVVGFSELTLVTRQAAGATKAYLLF 207

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 +YL+L+++  +F+  L       
Sbjct: 208 FCAAGALYLALTLVSNVFIGMLERHARRG 236


>gi|146312499|ref|YP_001177573.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145319375|gb|ABP61522.1| L-arginine ABC transporter membrane protein / L-lysine ABC
           transporter membrane protein / L-histidine ABC
           transporter membrane protein / L-ornithine ABC
           transporter membrane protein [Enterobacter sp. 638]
          Length = 228

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 89/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L    +T++      V + ++G+V +      +R           +    T LI 
Sbjct: 5   FSGVILQGALVTLELALSSVVLAVLIGLVGAGAKLSSNRILAL-------VFEAYTTLIR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P LVL+ L +                        ++  I L     A+  E  R   +
Sbjct: 58  GVPDLVLMLLIFYGLQIALNSVTDAIGMSQIDIDPMVAGIITLGFIYGAYFTETFRGAYM 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVPRG +EAA A G T  +  R ++ P  MR  +P + + +  +LK ++L   +G  D+V
Sbjct: 118 AVPRGHIEAATAFGFTASQIFRRIMFPAMMRFALPGIGNNWQVILKATALVSLLGLEDVV 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                    T +     ++   IYL  + +    +  L  + ++  K+
Sbjct: 178 KATQLAGKSTWEPFYFAVVCGLIYLVFTTVSNGVLLLLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 37/65 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A +IG +    +LS+N+++A +   Y  + R +P LV++  
Sbjct: 8   VILQGALVTLELALSSVVLAVLIGLVGAGAKLSSNRILALVFEAYTTLIRGVPDLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|290893634|ref|ZP_06556616.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
 gi|290556836|gb|EFD90368.1| amino acid ABC transporter [Listeria monocytogenes FSL J2-071]
          Length = 235

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 13  MAMLKTIPLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG++AV  G
Sbjct: 72  MLIYLGIPLLVDF-LSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 131 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA  +
Sbjct: 191 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYQ 231


>gi|163792482|ref|ZP_02186459.1| hypothetical protein BAL199_16583 [alpha proteobacterium BAL199]
 gi|159182187|gb|EDP66696.1| hypothetical protein BAL199_16583 [alpha proteobacterium BAL199]
          Length = 238

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 80/214 (37%), Gaps = 1/214 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +FVLG+V+       ++  +    + L   Y +         ++ +      
Sbjct: 25  WTLLLATVAFVLGVVIG-SLGAGAKLSYLPPLRWLGQGYTTVIRGVPDLLVIYLLFFGGN 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +        G      F    IAL   + A+  E++R  ++AVP GQ+EAA A G
Sbjct: 84  QAVMAIARSLFGYDGYIELNAFTIGAIALGTVSGAYSTEVIRGAVLAVPAGQIEAARACG 143

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R +L+PQ  R  +P L + +   LK++SL   VG  +++         T +  
Sbjct: 144 MSGWLLFRRILVPQVARYALPGLGNVWQLTLKDTSLISIVGLVEIMRSASIASGSTQKPF 203

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    +YL L+                  ++
Sbjct: 204 VFYVSAACLYLVLTAGSNRAFGLAELWANRGVRR 237



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 37/84 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   ++ G + T  LA    +   +IG+L    +LS    + W+ + Y  V R +P L+V
Sbjct: 15  WGDEMVRGALWTLLLATVAFVLGVVIGSLGAGAKLSYLPPLRWLGQGYTTVIRGVPDLLV 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
           I+ L+      +     S+    G
Sbjct: 75  IYLLFFGGNQAVMAIARSLFGYDG 98


>gi|119383470|ref|YP_914526.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373237|gb|ABL68830.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 220

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                ++   + G+ L L    L + +  +    +   YI   +I G P LV +   + L
Sbjct: 19  VTVLCWILGTIFGMALGLMI-ALIQRYGPRWLGWIIQAYIE--VIRGTPFLVQL---FVL 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  P++                +  + L+ Y + + AEI RSG  AVP GQ+EAA A+G
Sbjct: 73  YYGGPLI--------GLRLDALPAGLLGLTIYGSPYFAEIFRSGFRAVPHGQIEAARAIG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R VLLP  + S +P L +  + L K + +   +   +L+     +  +T + +
Sbjct: 125 MAEPTIVRRVLLPLGLVSSLPALVNFSIILTKETVILSIITVPELMYQVSRMSTETFRYL 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           E  L+    + +L   I+    RL  +I
Sbjct: 185 EANLVLALFFWALVETISRVGRRLETRI 212



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y  A+L GF  T      G I    +G ++   +    + + WI + Y+EV 
Sbjct: 1   MEWSILEQYGPALLRGFGVTVLCWILGTIFGMALGLMIALIQRYGPRWLGWIIQAYIEVI 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           R  P LV +F LY     +    D       G+ +               A
Sbjct: 61  RGTPFLVQLFVLYYGGPLIGLRLDALPAGLLGLTIYGSPYFAEIFRSGFRA 111


>gi|300172351|ref|YP_003771516.1| L-cystine permease [Leuconostoc gasicomitatum LMG 18811]
 gi|299886729|emb|CBL90697.1| L-cystine permease protein [Leuconostoc gasicomitatum LMG 18811]
          Length = 234

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 7/237 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +    + +      +     + V S ++G +L L    L R++       L  L+ 
Sbjct: 1   MNFDIGFIFQVMGQIIRYVPITIYMAVVSLIIGGMLGLVV-ALVRYYKVP---GLSQLFS 56

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS---PEFMSLYIALSCYTAAFI 281
               I     L+L+ L   L   +        +G        P  +   I LS      +
Sbjct: 57  IVITILKGVPLILVFLVIFLITSQNFNHFAKAVGWHVRYGDLPMSVLAIIGLSLMATVGL 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E  R    +V + Q +AA +LG+T  +  R VL+PQ M   +P + + ++NL+K +++A
Sbjct: 117 SEAFRGAFESVKQVQFDAARSLGMTQLQTIRRVLIPQTMPVALPMIINMFINLIKGTAIA 176

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             V   ++ S      +   +  E  +    IY  ++I+I      L  ++  K K+
Sbjct: 177 SLVSVVEIFSAATQAASSNYKYFEAYIAAALIYWMMTIVIERGAVFLEVRMDKKIKR 233


>gi|331695543|ref|YP_004331782.1| ectoine/hydroxyectoine ABC transporter permease EhuC
           [Pseudonocardia dioxanivorans CB1190]
 gi|326950232|gb|AEA23929.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Pseudonocardia dioxanivorans CB1190]
          Length = 236

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 15/226 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            LS  +  +       +   VL IVLS  A  L+     +T + +  +Y+    + G   
Sbjct: 7   FLSVLSQGLPETLIATIGGIVLTIVLSFGAG-LALLSPSRTVRVIARVYVE--GLRGTSE 63

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   + ++F  PVL  F  +          +  + L     A+ AEIVR  + +VPR
Sbjct: 64  VVQL---FWIYFALPVLVGFQLV-------PIWAGILVLGLNHGAYGAEIVRGAVQSVPR 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+E AIAL L+  +  R V+LPQA+  +IPP  + ++ LLK+++L   V   ++     
Sbjct: 114 AQVEGAIALSLSPAQRMRRVILPQAVVEMIPPFNNLFIQLLKSTALLSFVSVNEITRQAQ 173

Query: 355 TII--NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++      QA +I L+ + +YL L+++I   M  L    A +  +
Sbjct: 174 QVLVPRFNAQAFQIFLLLLVMYLILALVITAVMRTLERLAAARVGR 219



 Score = 43.0 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 33/70 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++ + +  G   T      G++   ++    G   LS ++ V  I RVYVE  R    +V
Sbjct: 6   TFLSVLSQGLPETLIATIGGIVLTIVLSFGAGLALLSPSRTVRVIARVYVEGLRGTSEVV 65

Query: 144 VIFFLYKSVL 153
            +F++Y ++ 
Sbjct: 66  QLFWIYFALP 75


>gi|282862286|ref|ZP_06271348.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282562625|gb|EFB68165.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 215

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V S V+ +VL +      R       +     +++      L  L LI        
Sbjct: 19  VSITVVSSVIALVLGVLIAGF-RVSPVPPLRVFGTAWVTLLRNTPLTLLFLIFFFVVPEI 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P +              F+   +AL  YT++F+ E VRSG+  VP GQ EAA ++G+T
Sbjct: 78  LFPGM------------SPFLLGSLALGLYTSSFVCEAVRSGINTVPLGQAEAARSIGMT 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R+V+LPQA R++IPPL+S ++ L KNS++A A    +L      + ++    + +
Sbjct: 126 FAQTLRMVILPQATRTVIPPLSSIFIALTKNSAIAGAFSVTELFGWQKLMSDRGYDIVPV 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL ++  I+     L  ++ +  
Sbjct: 186 FIWVALGYLVVTFAISGLFRLLERRMEVAR 215



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  +     + A ++G L+   R+S    +      +V + RN P  ++    +  
Sbjct: 14  GFIGTVSITVVSSVIALVLGVLIAGFRVSPVPPLRVFGTAWVTLLRNTPLTLLFLIFFFV 73

Query: 152 VLSVLPIPDHSIVL 165
           V  +L       +L
Sbjct: 74  VPEILFPGMSPFLL 87


>gi|260462849|ref|ZP_05811054.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259031493|gb|EEW32764.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 269

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 104/251 (41%), Gaps = 13/251 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L    L ++      +   +       GL     ++   A   V  F+L + L L   
Sbjct: 23  IVLILVALGLVLGAIFFMRWDWLPQYYEMGLLGIWRSLWILAVTCVLGFLLAVPLGLAQA 82

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP- 264
             S  F         L      +I G P L+ + L Y       +  Q+ +I  S + P 
Sbjct: 83  TGSFWFA-------ALAKAFCTVIRGTPLLIQLWLLYYG--LGSLFPQYPWIRESWMWPY 133

Query: 265 ---EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +    +AL+   A +  E++R     VP+GQ+EAA A G++  K  R + LPQA  
Sbjct: 134 LRQAWPYGVLALTLSFAGYEGEVMRGAFAGVPKGQLEAARAFGMSRWKIFRRIWLPQAFY 193

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P LT + +  LK++ L   +   D+ +V   +   T    E +L+   IY++++ ++
Sbjct: 194 RALPTLTGETVLQLKSTPLVATISVIDIFAVSSKVRQDTYLTYEPLLLLALIYMTITGIL 253

Query: 382 ALFMNRLNAKI 392
                R+ A+I
Sbjct: 254 VFAFGRIEARI 264



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 56/154 (36%), Gaps = 3/154 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    L+G   + W+     +   ++   +G  + + +   A + + +  V R  P L+
Sbjct: 47  QYYEMGLLGIWRSLWILAVTCVLGFLLAVPLGLAQATGSFWFAALAKAFCTVIRGTPLLI 106

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            ++ LY  + S+ P            +L  +   +  L +  +   +    + G    + 
Sbjct: 107 QLWLLYYGLGSLFPQYPWIRESWMWPYL-RQAWPYGVLALTLSFAGYEGEVMRGAFAGVP 165

Query: 204 ATRL--SRHFHEKTGKALPLLYISTFLIFGLPTL 235
             +L  +R F     K    +++       LPTL
Sbjct: 166 KGQLEAARAFGMSRWKIFRRIWLPQAFYRALPTL 199


>gi|227325812|ref|ZP_03829836.1| Polar amino acid ABC transporter, inner membrane subunit precursor
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 369

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 54/235 (22%), Positives = 107/235 (45%), Gaps = 14/235 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+F  +   S     +     +F  + V+G+ +S+    L R       + L +++I
Sbjct: 139 MSGGVFGLSYVPSSEWGGLPLTILLFSGTVVIGMPVSVLL-ALGRRSPLPFLRGLSVIFI 197

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L T++ +A          V     F+       + + + I ++ + A + AE+
Sbjct: 198 EGLRGVPLITILFVA----------VNVFPLFLPAGMEINKLLRIIIGIALFFACYQAEV 247

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL +VPRGQ EAA+AL L +   T  ++LPQA+R  +P +T+  +  +KN+S  + +
Sbjct: 248 IRGGLQSVPRGQYEAAMALNLGYWHTTTKIILPQALRICLPAMTNHIIAAMKNTSFVIII 307

Query: 345 GFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D+++   +++         IE  L    IYL    +++ +   +  +I    
Sbjct: 308 GLFDILTATSSVMQDPLWRRYYIETYLFISAIYLLFGFLLSRYALWVEKRIDASR 362


>gi|295835695|ref|ZP_06822628.1| glutamate permease [Streptomyces sp. SPB74]
 gi|197698111|gb|EDY45044.1| glutamate permease [Streptomyces sp. SPB74]
          Length = 214

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++ +L +VL        R     + +     +++      L  L    L     F
Sbjct: 19  LELTVYASLLALVLGFVMASF-RVAPVGSLRVFGTAWVTVLRNTPLTLLFFAVLLGLPRF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +  Q                 +AL CYT+AFI E +RSG+  VP+GQ EAA +LG++
Sbjct: 78  GLVLPFQLF-------------AVLALGCYTSAFICEALRSGINTVPKGQGEAARSLGMS 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA RS+IPP+ SQ + L KNS++A A    +L+    T+       + +
Sbjct: 125 FGQTLTAVILPQAFRSVIPPVGSQLIALAKNSAIAGAFSVTELLGTYKTLNELGFDIVWV 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL L++ I+   N L  +  +  
Sbjct: 185 FVWIAVGYLLLTLAISALFNYLEHRWGVSR 214



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A ++G ++ + R++    +      +V V RN P  ++ F +   
Sbjct: 14  GFLGTLELTVYASLLALVLGFVMASFRVAPVGSLRVFGTAWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|158425496|ref|YP_001526788.1| putative amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158332385|dbj|BAF89870.1| putative amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 235

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 32/222 (14%)

Query: 185 TNAKIFVFSFVLGIVLSLF--ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           T     + S +LG++ +L     R S H + +  +A+PL+    F+ F LPTL L     
Sbjct: 25  TLLFSTLVSLILGVMATLHSRMLRWSIHGYVEFFRAIPLIVNVFFVYFVLPTLGLDL--- 81

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                                  F ++   L+ + +A   EIVR+G+ AVP  Q  +A A
Sbjct: 82  ---------------------SPFAAVVFGLTLWGSANGIEIVRAGIEAVPAHQWRSAWA 120

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG- 361
           LG+   +    ++ PQA+R I+PP T     L++ +SL   VG  + + VG  II ++  
Sbjct: 121 LGMRQWEVYWHIVAPQAIRLIVPPFTGLLTLLVQATSLGALVGVTEFLKVGQIIIERSAV 180

Query: 362 -----QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 A  +    + +Y  +   ++     L  ++  K  +
Sbjct: 181 MNGVSPAFLVYGFVLAVYFIICSALSWLSRYLERRLGRKSNR 222



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 5/152 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I  G   T  LA   ++ +T++  ++G      ++++ W    YVE FR IP +V +
Sbjct: 8   WPLIQKGLGMTLGLAVVTLLFSTLVSLILGVMATLHSRMLRWSIHGYVEFFRAIPLIVNV 67

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           FF+Y  + ++         + FG+ L         +     A   V +       +L   
Sbjct: 68  FFVYFVLPTLGLDLSPFAAVVFGLTLWGSANGIEIVRAGIEA---VPAHQWRSAWALGMR 124

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           +   ++H    +A+ L+      +  L  LV 
Sbjct: 125 QWEVYWHIVAPQAIRLIVPPFTGL--LTLLVQ 154


>gi|282857470|ref|ZP_06266702.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Pyramidobacter piscolens W5455]
 gi|282584689|gb|EFB90025.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Pyramidobacter piscolens W5455]
          Length = 150

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 5/151 (3%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            ++F  P L     + G     +     + L+  + A+++EI+R   +AV RGQ+EAA +
Sbjct: 1   MIYFGLPRL-----VAGLASMGKIEGFMLTLALNSGAYMSEIIRGAFLAVDRGQIEAAKS 55

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           + LT  +  RL+++PQA+   +P + +  ++ +K SSLA  +G  D+ +V       T +
Sbjct: 56  INLTRMQTLRLIVIPQAVPVAVPGIVNNLIDAIKGSSLAFTIGILDITAVAKIQAGITFR 115

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             E  +  + +Y  + + +     R   K+ 
Sbjct: 116 YFEAYMSMVIMYWLIVLALEQLQKRCEDKLK 146


>gi|167815880|ref|ZP_02447560.1| ABC transporter, permease protein [Burkholderia pseudomallei 91]
          Length = 262

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 78  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 130

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A +ALGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 131 HAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 190

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 191 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 227


>gi|291616826|ref|YP_003519568.1| OccQ [Pantoea ananatis LMG 20103]
 gi|291151856|gb|ADD76440.1| OccQ [Pantoea ananatis LMG 20103]
          Length = 243

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 1/187 (0%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    +  + L   Y   F       LV+    +        +GQ     G   +P F+
Sbjct: 48  AKLSSHRPLRWLGEGYSVIFRGI-PELLVIYLFYFGGSGLITQIGQIFGAQGFIEAPPFL 106

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              +A+   + ++ AE+ R+  +A+ RG++EAA+A G++  +  + +LLPQ  R  +P L
Sbjct: 107 IGALAIGLISGSYQAEVYRAARLALSRGEVEAAVATGMSRWRIRQRILLPQVARYALPGL 166

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +   LK+S+L    G  +L+         T       LI    YL L+++      R
Sbjct: 167 SNVWQMSLKDSALVSVTGIVELMRASQVAAGSTRDYFTFYLIGGGCYLLLTVLSNRAFLR 226

Query: 388 LNAKIAL 394
           + A++  
Sbjct: 227 VEARLGR 233


>gi|253690351|ref|YP_003019541.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756929|gb|ACT15005.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 369

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/235 (23%), Positives = 109/235 (46%), Gaps = 14/235 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+F  +   S     +     +F  + V+G+ +S+    L R       + L +++I
Sbjct: 139 MSGGVFGLSDVPSSEWGGLPLTILLFSGTVVIGMPVSVLL-ALGRRSPLPFLRGLSVIFI 197

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L T++ +A+     F  P   + N         + + + I ++ + A + AE+
Sbjct: 198 EGLRGVPLITILFVAVNVFPLF-LPAGMEIN---------KLLRIIIGIALFFACYQAEV 247

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL +VPRGQ EAA+AL L +   T  ++LPQA+R  +P +T+  +  +KN+S  + +
Sbjct: 248 IRGGLQSVPRGQYEAAMALNLGYWHTTTKIVLPQALRICLPAMTNHIIAAMKNTSFVIII 307

Query: 345 GFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D+++   +++         IE  L    IYL    +++ +   +  +I    
Sbjct: 308 GLFDILTATSSVMQDPLWRRYYIETYLFISAIYLLFGFLLSRYALWVEKRIDASR 362


>gi|255027829|ref|ZP_05299815.1| hypothetical protein LmonocytFSL_18331 [Listeria monocytogenes FSL
           J2-003]
          Length = 235

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 13  MAMLKTIPLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 72  MLIYLGIPLLVDF-LSKSFGLGVXANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 131 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA   
Sbjct: 191 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYR 231


>gi|154508367|ref|ZP_02044009.1| hypothetical protein ACTODO_00864 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798001|gb|EDN80421.1| hypothetical protein ACTODO_00864 [Actinomyces odontolyticus ATCC
           17982]
          Length = 219

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 12/226 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFLI 229
           +N   L+         A + +    +GIV SL    L +     +   A  +      L 
Sbjct: 1   MNLDILARYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIRQYRIPVATQIAVAYVELS 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P LV +   Y           F                + L     A++AE +RSGL
Sbjct: 61  RNTPLLVQLFFIY-----------FGLPRVGIKWSGETCAIVGLIFLGGAYMAEALRSGL 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++   Q E++ ALGLT  +  R V LPQA+ + +PPL +  + L+K +S+   V   DL
Sbjct: 110 DSIATIQWESSAALGLTRTQTLRHVALPQAIATSVPPLAANVIFLIKETSVVSVVALPDL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           V V   +I  +    E +++ +  YL + + +++    +  K+   
Sbjct: 170 VYVAKDLIGMSYNTSEALILLVIAYLVILLPVSIAARLIEKKVRRG 215



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 41/108 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA   +   + T  +A  G++ +  +G LV A R     +   I   YVE+ RN P LV
Sbjct: 8   RYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIRQYRIPVATQIAVAYVELSRNTPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
            +FF+Y  +  V            G+           L    ++   +
Sbjct: 68  QLFFIYFGLPRVGIKWSGETCAIVGLIFLGGAYMAEALRSGLDSIATI 115


>gi|163759018|ref|ZP_02166104.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Hoeflea phototrophica DFL-43]
 gi|162283422|gb|EDQ33707.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Hoeflea phototrophica DFL-43]
          Length = 235

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 16/215 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + + + G +++L  T + R       K +   YI  F    L              
Sbjct: 28  IYLSLIALIGGGLIALVIT-IVRTSPYLNAKRVAAGYIWLFQSVPLLM-----------L 75

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +      I G  V+P +++  IAL  Y +A++A++ R  + ++P GQ E A ALGL+
Sbjct: 76  LFLIGLGIPRILGVNVNP-WLAASIALVVYASAYLADVWRGAVESIPAGQWEGARALGLS 134

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K  RLV+LPQA+R  + P     + ++K +SLA  +GF DL+S+G    N      E 
Sbjct: 135 FLKIVRLVILPQAVRISLAPTVGFTVQIIKGTSLAYIIGFYDLMSIGKRWANAPVSGTEP 194

Query: 367 ILIW---MFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +I+     IY  L   ++++  RL  ++     K
Sbjct: 195 YVIFPLMALIYFCLCFPLSVWARRLERRLGAVSSK 229


>gi|319761803|ref|YP_004125740.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330826337|ref|YP_004389640.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317116364|gb|ADU98852.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329311709|gb|AEB86124.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 237

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 3/171 (1%)

Query: 225 STFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            T+ + G P L+ + L Y      +       +    +     F    ++ S  TAA+ A
Sbjct: 58  FTYFMRGTPLLIQVYLIYYGVAQLEWVQARWDDVWPWTNFKEPFFCALLSFSLNTAAYTA 117

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +   +    +G++EAA A+G+      R ++LP A+R ++P   ++ + +L +SSLA 
Sbjct: 118 ETLAGSIRETSKGEVEAARAMGMGPWMLMRRIVLPSAIRRMLPAYGNEVVMMLHSSSLAS 177

Query: 343 AV-GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            V    DL      +        E  L    IYL +++ +      +  + 
Sbjct: 178 TVPALTDLTGAASRVYADFYLPFEAYLFAAAIYLCITLCLIGATRLVERRF 228


>gi|113475661|ref|YP_721722.1| polar amino acid ABC transporter inner membrane subunit
           [Trichodesmium erythraeum IMS101]
 gi|110166709|gb|ABG51249.1| polar amino acid ABC transporter, inner membrane subunit
           [Trichodesmium erythraeum IMS101]
          Length = 403

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 68/325 (20%), Positives = 129/325 (39%), Gaps = 15/325 (4%)

Query: 81  SDSSYAT-AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
               Y    ++VG +++ +    G+I             +    L   I  + V VF   
Sbjct: 77  PRDQYWRIWVIVGIISSLFGFSWGVIARNSAQLFTLPVLIGIAFLPVIILIIPVNVF--F 134

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV---- 195
             L++   +     +             G +L+   L    L +           V    
Sbjct: 135 KLLLLGMVILVVATAWSGKKLSIKNSKLGKYLSFYWLIAFILIVWLIGGGLGLKSVSTND 194

Query: 196 -LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
             G++L++    +S       G  L L   ST  +  + ++  I +   L     +    
Sbjct: 195 WGGLMLTVLMAVVSIFLSFPLGVLLALGRQSTLPVIRIFSIGYIEIIRGLPLISILFMGQ 254

Query: 255 N----FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+             + L+ ++AA++AE VR GL +V RGQ EAA ALGL    +
Sbjct: 255 ILIPLFLPDGMRPDRIFRAILGLTLFSAAYLAENVRGGLQSVLRGQSEAAKALGLNTPLS 314

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEII 367
             L++LPQA++  IP +  Q+++L ++++L   VG  +L+ +  +I+ Q    G   E+ 
Sbjct: 315 LGLIVLPQALKVAIPSIVGQFISLFQDTTLLSIVGLVELLGISRSILAQPEFLGDYAEVY 374

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKI 392
           L    I+  +   +++   +L  K+
Sbjct: 375 LFDGIIFWIVCYAMSVGSRQLEKKL 399


>gi|16804385|ref|NP_465870.1| hypothetical protein lmo2347 [Listeria monocytogenes EGD-e]
 gi|47096045|ref|ZP_00233647.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|224503523|ref|ZP_03671830.1| hypothetical protein LmonFR_13622 [Listeria monocytogenes FSL
           R2-561]
 gi|254826828|ref|ZP_05231515.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|254831228|ref|ZP_05235883.1| hypothetical protein Lmon1_07717 [Listeria monocytogenes 10403S]
 gi|254901127|ref|ZP_05261051.1| hypothetical protein LmonJ_14973 [Listeria monocytogenes J0161]
 gi|254938338|ref|ZP_05270035.1| amino acid ABC transporter [Listeria monocytogenes F6900]
 gi|255028989|ref|ZP_05300940.1| hypothetical protein LmonL_07141 [Listeria monocytogenes LO28]
 gi|16411835|emb|CAD00425.1| lmo2347 [Listeria monocytogenes EGD-e]
 gi|47015642|gb|EAL06573.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258599206|gb|EEW12531.1| amino acid ABC transporter [Listeria monocytogenes FSL N3-165]
 gi|258610950|gb|EEW23558.1| amino acid ABC transporter [Listeria monocytogenes F6900]
          Length = 235

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 13  MAMLKTIPLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 72  MLIYLGIPLLVDF-LSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 131 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA   
Sbjct: 191 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYR 231


>gi|319405906|emb|CBI79538.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella sp. AR 15-3]
          Length = 250

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T   +    + +  +G+++ +  T           +A+   ++   ++  +P L
Sbjct: 34  LDGFKNTAILSIYSLILAIFVGVIIGMIRTLPKTSIINNFLRAIGTFWVE--IMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +      + +  AL  +T+A IAE VRSG+ ++P G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAINFSPILLIICALGFFTSARIAEQVRSGIESIPSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G    ++ R ++LP+A+R+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFNTYQSYRYIILPRAIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  L+   +Y+ +S+ I + M  +   I +
Sbjct: 204 TIEEVSHVYENYLLVTILYIIISLFIFVLMTIIERMIRI 242



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVF 136
             +Y   +L GF NT  L+   +I A  +G ++G  R        N  +  I   +VE+ 
Sbjct: 26  SHTYLDTLLDGFKNTAILSIYSLILAIFVGVIIGMIRTLPKTSIINNFLRAIGTFWVEIM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
           RNIP LV +F  Y  V  + P   +   +
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPAINFSPI 114


>gi|207722318|ref|YP_002252754.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206587495|emb|CAQ18077.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 259

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 11/219 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             N  L    LT+         S   GI  +L   RL              L  +   + 
Sbjct: 18  FPNGPLGGAALTLWMALLACAASTAAGIAFALLLDRLDHLGTRAAAGLACALRGTLATLR 77

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P L+L+   Y L            +      PE  ++  AL+   AA+IA+ +++GL 
Sbjct: 78  AVPVLMLMFWAYFLI----------PMALGVAVPETATVVTALAAVGAAYIAQSMQAGLR 127

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ  AA+ALG++  +A   V+LPQA R ++P + +Q+++ +K++SLA  VG  +L 
Sbjct: 128 AVGTGQRNAALALGMSPGQALLAVVLPQAWRIMLPSVANQWVSTVKDTSLAYIVGVVELS 187

Query: 351 SVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +    + ++      E+      +Y  L   I L    L
Sbjct: 188 TAASQVNSRIVAYPAEVFAAVAVLYFVLCSGIELLPRWL 226


>gi|255023478|ref|ZP_05295464.1| L-cystine transport system permease protein TcyM [Listeria
           monocytogenes FSL J1-208]
          Length = 235

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 13  MAMLKTIPLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG++AV  G
Sbjct: 72  MLIYLGIPLLVDF-LSKSFGLGITANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 131 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA  +
Sbjct: 191 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYQ 231


>gi|325523119|gb|EGD01520.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 240

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 1/189 (0%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +    +  +A   LY + F       LV+    +       ++G++  + G    P F+ 
Sbjct: 47  KLSRVRVLRAAGDLYTTVFR-GVPELLVIYLFYFGGSSLVTMVGRWFGVDGFIGLPPFLI 105

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +A+   + A+ AE+ R  ++AV RG++EAA A+G+      R +L+PQ +R  +P + 
Sbjct: 106 GALAVGMISGAYQAEVYRGAVLAVSRGELEAARAIGMPTATLMRRILIPQVLRYALPGIG 165

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +   LK+S+L    G A+L+         T Q     +    +YL ++ M     N  
Sbjct: 166 NVWQLSLKDSALISVTGLAELLRASQVAAGSTHQYFVFFIAGGTLYLLMTAMSNRIFNHA 225

Query: 389 NAKIALKEK 397
            +++A   +
Sbjct: 226 ESRVARTFR 234


>gi|257387739|ref|YP_003177512.1| polar amino acid ABC transporter inner membrane subunit
           [Halomicrobium mukohataei DSM 12286]
 gi|257170046|gb|ACV47805.1| polar amino acid ABC transporter, inner membrane subunit
           [Halomicrobium mukohataei DSM 12286]
          Length = 238

 Score =  116 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 102/213 (47%), Gaps = 9/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + S  LG +       +   +   + +++       F    +  LV++     L
Sbjct: 27  VTVLLTITSLSLGFLAGFPMGAI-EVYGPDSLRSVVGTVGVVFRGTPIVVLVVV-----L 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+               F++  +AL   + A+ +++ R  + ++  GQME A ++G
Sbjct: 81  YFGLPIPQLGTVPALDIQVTPFLAAALALGLRSGAYQSQVFRGAIQSISEGQMEGARSIG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-- 362
           ++  +A R V+ PQA+R  IP   +++  +LK++S+A A+G A+L++    +  Q G+  
Sbjct: 141 MSKLQAIRHVIFPQAIRRSIPGFQNEFTIVLKDTSVAFAIGLAELLTRAENLYLQPGRGT 200

Query: 363 -AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +E+IL    IY  L++     ++RL+ + A+
Sbjct: 201 AVMEVILTITAIYFVLTVATNRTLDRLHDRYAI 233


>gi|289177408|gb|ADC84654.1| Transporter [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 253

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 97/245 (39%), Gaps = 11/245 (4%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN-AKIFVFSFVLGIVLSLFATRLSRHFH 212
              P          G ++ +            N A + +F  V GI L++    +     
Sbjct: 19  QPQPTNTAQTAAKGGPYMFDWAFVAKYAPFFVNGAWMTLFISVFGIALAILTGIICAAI- 77

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +T +   L  I+T  I       L+   Y L+F  P +          V    +   + 
Sbjct: 78  -ETARIPVLRQITTVYIEVSRNTPLLVQLYFLYFGLPKM--------GFVWSAELCAIVG 128

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L     +++AE +R+GL +VP+ Q E A  LG    +    V++PQA+    P + +  +
Sbjct: 129 LGFLGGSYMAESMRAGLQSVPQIQRENAYMLGFNTWQTLTRVIVPQAVSISTPGIVANVI 188

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L+K SS+  A+  AD++ +   ++       E + + +  YL + + I++    L  + 
Sbjct: 189 FLIKESSVVSAIALADVMYMAKDLMGMYYNTYEALFMLIVTYLIILLPISILGTWLERRF 248

Query: 393 ALKEK 397
               +
Sbjct: 249 DYARR 253



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 36/71 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T +++  G+  A + G +  A   +   ++  I  VY+EV RN P LV 
Sbjct: 45  YAPFFVNGAWMTLFISVFGIALAILTGIICAAIETARIPVLRQITTVYIEVSRNTPLLVQ 104

Query: 145 IFFLYKSVLSV 155
           ++FLY  +  +
Sbjct: 105 LYFLYFGLPKM 115


>gi|114771235|ref|ZP_01448655.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [alpha proteobacterium HTCC2255]
 gi|114548160|gb|EAU51047.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [alpha proteobacterium HTCC2255]
          Length = 434

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 116/262 (44%), Gaps = 18/262 (6%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            I  + +    +  + S L I  HSI+      + +  L    L +         S  +G
Sbjct: 188 VIASIALPVLWWLFITSPLSISLHSIMPIGSEAIESDRLGGFMLAVLIGVTGIALSLPIG 247

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I+L+L      R  +    KA+ + +I       L TL+ +A      F  P        
Sbjct: 248 ILLAL-----GRQSNLPILKAVCVCFIEFIRGVPLITLLFVASTLLNIFLPP-------- 294

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
              +     + + I ++ + +A++AE+VR GL A+P+GQ EAA +LGL + KA RL+++P
Sbjct: 295 --GSNFDLILRVMIMVTLFASAYMAEVVRGGLAALPKGQYEAADSLGLDYWKAQRLIIMP 352

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIY 374
           QA++  IP + S ++ L K+++L   +G  D + +   I   +   G   E+      I+
Sbjct: 353 QALKISIPGIVSTFIGLFKDTTLVSIIGLLDPLGLSTNIRADMAWNGILWELYGFVGLIF 412

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
                 ++ +   L  K+A   
Sbjct: 413 FIFCFSMSRYSMYLERKLATGH 434


>gi|298487228|ref|ZP_07005277.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298158252|gb|EFH99323.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 220

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 14/231 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    +   G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWTAREVLWSGFLTSIQCSALAIAAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL            +               F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVLAVFYMVPALGWQI-------------SAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+P GQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRV 217


>gi|289625713|ref|ZP_06458667.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646322|ref|ZP_06477665.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330869650|gb|EGH04359.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 216

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y L F  P+             P   +  I L CY AA+IAE  R  +  +P GQ
Sbjct: 67  LMVQLYVLFFALPL--------AGITFPAITTGVIGLGCYYAAYIAEAYRGAIDDIPAGQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL        R ++LPQA++ ++P L +  + + K + L   +   +L      +
Sbjct: 119 WEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQV 178

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T +  E   +   ++L++S+  +L    L  +
Sbjct: 179 AGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 213


>gi|260461850|ref|ZP_05810096.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785375|ref|YP_004144851.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032491|gb|EEW33756.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171263|gb|ADV14801.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 214

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/151 (33%), Positives = 88/151 (58%)

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D PV+ +   I  +      +S  IAL+ +  A+I+++V SG+ A+P GQ EA IA GL+
Sbjct: 64  DIPVVVKLFAIYYAFGIDASISGVIALTLHQGAYISDVVTSGIRALPTGQWEAGIASGLS 123

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+    ++LPQA+R  +PPLTSQ++ ++KNSS  + +   DL  +   I  +T + +E 
Sbjct: 124 GRQVFTRIILPQAIRITVPPLTSQFIQVVKNSSTVMLIAIEDLTFMTQQIEQETFRGMEA 183

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +    +YL L+++IA  M+ +   +  + +
Sbjct: 184 AIAVTVLYLMLALLIAGAMSAVQVLMDRERR 214



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 34/70 (48%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   +  G   T  ++   +  + +IG++VG  +++A   +       VEV R+IP +
Sbjct: 9   WEYRALLFQGLGTTLRISLISIALSFLIGSVVGCLKVTAGFHLRKSLDTCVEVIRDIPVV 68

Query: 143 VVIFFLYKSV 152
           V +F +Y + 
Sbjct: 69  VKLFAIYYAF 78


>gi|114764422|ref|ZP_01443648.1| putative transport system permease abc transporter protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114543176|gb|EAU46194.1| putative transport system permease abc transporter protein
           [Roseovarius sp. HTCC2601]
          Length = 276

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R  P L+    +   +     +   + +    +      L      +     +   S + 
Sbjct: 21  RLAPLLMPHRLVMAGLALAALLAIITQMEWSWL---PVYLPKIGDGLLVTLVLLASSVIA 77

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G  L+L    + +       + L   + +  +I G P L+ + L Y       +  QF  
Sbjct: 78  GFALALPLGAV-QVTGPAPLRWLATGFCT--VIRGTPLLLQLWLIYYG--LGALFAQFPE 132

Query: 257 IGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           I GS + P     +   ++ L+   AA+  EI+R     VPRG++EAA A G+      R
Sbjct: 133 IRGSWLWPYLRQAWPYGFLTLTLSFAAYQGEIMRGAFAGVPRGELEAARAFGMPRLMVFR 192

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V  P+A+   +P L  + +  LK + L   +   DL +V   +   T    E +L+ + 
Sbjct: 193 RVWFPRAVHRALPTLAGEIILQLKATPLVATITVTDLYAVITRVRQDTYLTYEPLLLLIA 252

Query: 373 IYLSLSIMIALFMNRLNAKI 392
           IYL LS  + + +  L  ++
Sbjct: 253 IYLCLSGTLTIVLRWLEGRV 272



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 3/153 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  G + T  L  S +I    +   +GA +++    + W+   +  V R  P L+ 
Sbjct: 56  YLPKIGDGLLVTLVLLASSVIAGFALALPLGAVQVTGPAPLRWLATGFCTVIRGTPLLLQ 115

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           ++ +Y  + ++              +L  +   +  LT+  +   +    + G    +  
Sbjct: 116 LWLIYYGLGALFAQFPEIRGSWLWPYL-RQAWPYGFLTLTLSFAAYQGEIMRGAFAGVPR 174

Query: 205 TRL--SRHFHEKTGKALPLLYISTFLIFGLPTL 235
             L  +R F          ++    +   LPTL
Sbjct: 175 GELEAARAFGMPRLMVFRRVWFPRAVHRALPTL 207


>gi|1166637|gb|AAA85770.1| histidine transport system permease protein HisQ [Escherichia coli]
          Length = 228

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 5/215 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ- 243
              ++ + S VL +++ L      +    +    +   Y  T LI G+P LVL+ L +  
Sbjct: 15  CTLELAISSVVLAVIIGLIG-AGGKLSQNRLSGLIFEGY--TTLIRGVPYLVLMLLIFYG 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L      + +   +G   + P  ++  I L     A+  E  R   +AV +G +EAA A 
Sbjct: 72  LQIALNTVTEAMGVGQMDIDP-MVAGIITLGFIYGAYFTETFRCAFMAVAKGHIEAATAF 130

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V         T + 
Sbjct: 131 GFTRGQMCRRIMFPSMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLAGKSTWEP 190

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               ++   IYL  + +    +  L  + ++  K+
Sbjct: 191 FYFAIVCGLIYLVFTTVSNGVLLFLERRYSVGVKR 225



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 35/65 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + T  LA S ++ A IIG +   G+LS N+L   I   Y  + R +P LV++  
Sbjct: 8   VILQGALCTLELAISSVVLAVIIGLIGAGGKLSQNRLSGLIFEGYTTLIRGVPYLVLMLL 67

Query: 148 LYKSV 152
           ++  +
Sbjct: 68  IFYGL 72


>gi|315122675|ref|YP_004063164.1| general L-amino acid transport system permease protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313496077|gb|ADR52676.1| general L-amino acid transport system permease protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 386

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 110/271 (40%), Gaps = 9/271 (3%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R  P LV +      +  ++P      +    +F      SF  L       I   S   
Sbjct: 116 RWRPILVFVLGSILLIPMLMPSLPRKFLNGVLLFFLFPIFSFFVLYGGFGLTIVETSLWG 175

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN- 255
           G++++L  +          G  L L   S  L+  +  +  + L   +     +      
Sbjct: 176 GLLVTLVISLFGIIVSMPLGILLALGRSSNILVLRVVCITFVELFRGVPLVTVLFMTSVM 235

Query: 256 ---FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F+  +    + +   + ++ + +A+IAE+ R GL ++ +GQ EAA +LGL + +  R
Sbjct: 236 LPLFLPDAWDVDKLLRALLGVAAFASAYIAEVFRGGLQSISKGQFEAANSLGLNYFQTMR 295

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEII 367
            +++PQ ++ +IP + + ++ L K+S+L   +   D++ V     + +           +
Sbjct: 296 FIIIPQTIKRVIPGIVNTFIGLFKDSTLISIINMFDILGVVRANFSDSSWVSSVTPTTGL 355

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   F++      I+L+   +   +    KK
Sbjct: 356 IFVGFVFWIFCFSISLYSVFIERTLHKGSKK 386



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 39/79 (49%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T++  G + T  ++  G+I +  +G L+  GR S   ++  +C  +VE+FR +P + V+F
Sbjct: 171 TSLWGGLLVTLVISLFGIIVSMPLGILLALGRSSNILVLRVVCITFVELFRGVPLVTVLF 230

Query: 147 FLYKSVLSVLPIPDHSIVL 165
                +   LP       L
Sbjct: 231 MTSVMLPLFLPDAWDVDKL 249


>gi|313673707|ref|YP_004051818.1| polar amino acid abc transporter, inner membrane subunit
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940463|gb|ADR19655.1| polar amino acid ABC transporter, inner membrane subunit
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 290

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/226 (22%), Positives = 104/226 (46%), Gaps = 4/226 (1%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF--HEKTGKALPLLYISTFLIFGLP 233
           +    +++      F+   + G ++S     +   F  +    + +P L +     F + 
Sbjct: 65  IYTVKISIFVLILSFITGLITGFIISSTKGVIKELFEVYVVVLRNIPPLIVMFIFYFFIG 124

Query: 234 TLVLIALKYQLHFDKPVLGQFN--FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +     L  +  F   +             +   F+S  I L+ Y +A+IAEI+R G+  
Sbjct: 125 SSFTDVLNLETIFSNRLFASIITAIFTPEQIFIPFISAAIGLAFYESAYIAEIIRGGING 184

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ++A IALGL   +    +++PQA+   +P L  Q+++++KN+++A  V   +L  
Sbjct: 185 VEKGQIDAGIALGLNRVQVYLYIVIPQAIEKTLPSLIGQFVSIIKNTAIASIVAIPELTF 244

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               I+  +   +EI +    IY+ +++ ++   +R   +I  K K
Sbjct: 245 QAMEILASSRLILEIWITIFLIYMVMNLFVSSVASRAELRIRRKYK 290



 Score = 36.1 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 34/68 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G + T  ++   +I + I G + G    S   ++  +  VYV V RNIPPL+V+F  
Sbjct: 60  ITKGVIYTVKISIFVLILSFITGLITGFIISSTKGVIKELFEVYVVVLRNIPPLIVMFIF 119

Query: 149 YKSVLSVL 156
           Y  + S  
Sbjct: 120 YFFIGSSF 127


>gi|67923501|ref|ZP_00516976.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501]
 gi|67854643|gb|EAM49927.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Crocosphaera watsonii WH 8501]
          Length = 391

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 14/249 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
            F     L  +      + L  G F            +     + + S +L     +   
Sbjct: 154 TFSNWLSLIWVLTFFLLLGLLQGAFFLRPVRLDDFSGLILTLFVAIISIILSFPFGVLL- 212

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R       + L + YI          L LI + +      P++     +        
Sbjct: 213 ALGRQSELPVIRWLSIAYIELIR-----GLPLIGILFMAQVMLPLI-----LPQDMRIQR 262

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +      + ++AA++AE VR GL +VP+GQ EAA ALGL        V+LPQA+R +IP
Sbjct: 263 VIRAIAGFTLFSAAYLAENVRGGLQSVPKGQTEAAKALGLNGFFVLIFVVLPQALRVVIP 322

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIA 382
            +  Q+++L K++SL   VG  DL+ +  +I+      G+  E+ +    IY      ++
Sbjct: 323 AIVGQFISLFKDTSLLAIVGLVDLLGMSQSILANPKFIGRYGEVYIFVAAIYWVFCYSMS 382

Query: 383 LFMNRLNAK 391
           L   +L  K
Sbjct: 383 LLSRQLENK 391


>gi|222480217|ref|YP_002566454.1| polar amino acid ABC transporter, inner membrane subunit
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222453119|gb|ACM57384.1| polar amino acid ABC transporter, inner membrane subunit
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 267

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 105/213 (49%), Gaps = 9/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S +LG V+   A  +  +      + +     +  ++     +V+I +    
Sbjct: 59  LTIGLTAASILLGFVVGFPAGAVEVYGDGPLKRVVS----AAGIVLRGTPIVVILIVMYF 114

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P +     +G +++S    +  + L   +AA+ ++I R+ L +V  GQ+EA  ++G
Sbjct: 115 VVGVPQIN----LGVASISSAMTAGILGLGLRSAAYQSQIFRATLSSVDDGQLEAGRSIG 170

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-QTGQA 363
           L+  +A R V++PQA+R  IP   +++  +LK++S+  A+G A+L++ G  + + QT   
Sbjct: 171 LSRFEAVRYVVVPQALRRSIPGFQNEFTIVLKDTSIVFAIGLAELLTRGYDLFSEQTTAV 230

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +E+IL    IY  L+      ++RL    A+ E
Sbjct: 231 LEVILFISAIYFVLTFTTNRALDRLGDYYAIPE 263


>gi|49475423|ref|YP_033464.1| ABC transporter, permease protein [Bartonella henselae str.
           Houston-1]
 gi|49238229|emb|CAF27439.1| ABC transporter, permease protein [Bartonella henselae str.
           Houston-1]
          Length = 235

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 6/241 (2%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
            IP+    L     LN  GL F    + T   +F+ +  LG  L +F T   R  + K  
Sbjct: 1   MIPEWLYFLFNPALLNRYGLKFIDGFLVTFELVFI-ACSLGFFLGMFIT-FVRLSNNKLL 58

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +     Y+  F   G P L  + L Y          Q   +     +  +  ++I  +  
Sbjct: 59  RYFAHAYVYFF--RGSPLLAQLFLFYYGLGSMNSFWQQVGLWWFFQNAWYCCIFI-FALN 115

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           +AA+ +EI +   ++V  GQ+EA+ ALGL+       ++LPQAM   + PL ++++ ++K
Sbjct: 116 SAAYQSEIFKGSFLSVKAGQIEASKALGLSSSTTFFKIILPQAMVVALRPLGNEFILMIK 175

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +S++A  +   DL+ +     ++T    ++ +    IYL +  ++  F+  +   +    
Sbjct: 176 SSAIASLITIYDLMGIAKLTYSRTFD-FQVYIWVALIYLLVVALVHRFIIAIERHLTRYL 234

Query: 397 K 397
           +
Sbjct: 235 R 235



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 2/104 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    + GF+ TF L F        +G  +   RLS NKL+ +    YV  FR  P L 
Sbjct: 17  RYGLKFIDGFLVTFELVFIACSLGFFLGMFITFVRLSNNKLLRYFAHAYVYFFRGSPLLA 76

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +F  Y  + S+        V  +  F N          +++ A
Sbjct: 77  QLFLFYYGLGSMNS--FWQQVGLWWFFQNAWYCCIFIFALNSAA 118


>gi|217963555|ref|YP_002349233.1| L-cystine transport system permease protein TcyM [Listeria
           monocytogenes HCC23]
 gi|217332825|gb|ACK38619.1| L-cystine transport system permease protein TcyM [Listeria
           monocytogenes HCC23]
 gi|307571869|emb|CAR85048.1| polar amino acid ABC transporter, permease protein [Listeria
           monocytogenes L99]
          Length = 236

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 14  MAMLKTIPLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 72

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG++AV  G
Sbjct: 73  MLIYLGIPLLVDF-LSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIMAVDIG 131

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 132 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 191

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA  +
Sbjct: 192 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYQ 232


>gi|163744468|ref|ZP_02151828.1| polar amino acid uptake family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161381286|gb|EDQ05695.1| polar amino acid uptake family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 256

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 57/258 (22%), Positives = 108/258 (41%), Gaps = 23/258 (8%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  L+         L    IP+++ +   G++     L        T    F+ +  LG+
Sbjct: 16  LALLLGAVVWCAVALRWDWIPEYAPLALEGLWRTIWILVV------TCVLGFLLAIPLGL 69

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
             ++    LS               +   +I G P L+ I L Y       +  Q  +I 
Sbjct: 70  AQAIGPWYLS-----------VPARVFCTVIRGTPLLLQIWLLYYG--LGSLFPQIPWIR 116

Query: 259 GSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           GS + P     +    +AL+   A +  E++R    +V +GQ+EAA A G+      R +
Sbjct: 117 GSELWPYLRQAWPYAVLALTLSYAGYEGEVMRGAFSSVNKGQLEAANAFGMPRFTMFRRI 176

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
            LPQA+R+++P L  + +  LK + L   +   +L +V   + + T    E +++    Y
Sbjct: 177 WLPQAIRNVLPTLGGETILQLKATPLVATITVVELYAVSSRVRSDTFIVYEPLILLAVFY 236

Query: 375 LSLSIMIALFMNRLNAKI 392
           + ++ +IAL   R   ++
Sbjct: 237 MIIAGIIALMFRRFENRV 254



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 33/93 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   L G   T W+     +   ++   +G  +      ++   RV+  V R  P L+ 
Sbjct: 38  YAPLALEGLWRTIWILVVTCVLGFLLAIPLGLAQAIGPWYLSVPARVFCTVIRGTPLLLQ 97

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           I+ LY  + S+ P            +L      
Sbjct: 98  IWLLYYGLGSLFPQIPWIRGSELWPYLRQAWPY 130


>gi|317053674|ref|YP_004118808.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952779|gb|ADU72252.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 267

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 15/183 (8%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               +  +    +Y   F       L ++ +   L      L              +   
Sbjct: 55  ISPSRWVRLPARMYTDLFRGL-PSILTILLIGQGLARFSYQLFG---------PSPYPLG 104

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
             ALS   +A++ EI R+G+ +V RGQMEA  ALG+++ +A RLV++PQ +R ++P + +
Sbjct: 105 IFALSLIASAYMGEIFRAGIQSVERGQMEACRALGMSYSRAMRLVVIPQGIRRVLPAIVN 164

Query: 330 QYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           Q++ ++K+SSL   +G      +L  VG      TG  +  +++    YL +++ +   +
Sbjct: 165 QFIAIIKDSSLVYLLGLMTNQRELFRVGQDAAVLTGN-LSPLMLAGLFYLIITVPLTHMV 223

Query: 386 NRL 388
           N +
Sbjct: 224 NYV 226



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 39/82 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G VNT  ++ +  +  T++G L+    +S ++ V    R+Y ++FR +P ++ I  +
Sbjct: 25  LATGLVNTLIISLAATVLGTLLGLLLALLGISPSRWVRLPARMYTDLFRGLPSILTILLI 84

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
            + +             P G+F
Sbjct: 85  GQGLARFSYQLFGPSPYPLGIF 106


>gi|326204746|ref|ZP_08194601.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
 gi|325985117|gb|EGD45958.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium papyrosolvens DSM 2782]
          Length = 387

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 63/302 (20%), Positives = 120/302 (39%), Gaps = 21/302 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +     +   +   T++   V     +       I       +       +  + +  
Sbjct: 95  GIIKAVSFSIIAIFAITLLLPFVSIA--TRVWAFTQILLTLAGFWIGHKFKFIKKYYFLG 152

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-FVFSFVLGIVLSLFATRLSRH 210
            L  +PI    +     M   N  L    L     A +  V SF +G++L+L      R 
Sbjct: 153 WLLSVPIILILLNGVGNMKDVNTNLWGGFLLTVLIAVVDIVLSFPIGVLLAL-----GRR 207

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 +   ++YI            LI + +      P+     F+G        + + 
Sbjct: 208 SKLVVIRWFCIIYIEVIRGVP-----LITVLFGAQLLLPL-----FLGNGLELNNVLRVM 257

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + AA++AE VR G+  +P+GQ EAA ALGL + +    V++PQA+RS++P L   
Sbjct: 258 IGFTLFNAAYVAETVRGGMQIIPQGQYEAAQALGLNYVQRITFVIMPQALRSVVPALVGS 317

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNR 387
            + + K++SL   V   DL+ +   ++      G+ +E+ L    ++  +  +I+    R
Sbjct: 318 VIEVFKDTSLVAIVSLMDLLGIAKRVVANPQFLGRQMEVFLFVAAVFFVICTVISKISKR 377

Query: 388 LN 389
           + 
Sbjct: 378 ME 379



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 33/59 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           +  GF+ T  +A   ++ +  IG L+  GR S   ++ W C +Y+EV R +P + V+F 
Sbjct: 177 LWGGFLLTVLIAVVDIVLSFPIGVLLALGRRSKLVVIRWFCIIYIEVIRGVPLITVLFG 235


>gi|218510923|ref|ZP_03508801.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 250

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 108/237 (45%), Gaps = 14/237 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
            +L  G  L     +     +     + +        ++L    L+R    +  +   +L
Sbjct: 25  WLLMAGTLLPPNVPTSQWGGLPITLLVSLTGLATAFPIALLL-ALARRSEMRILRIFAVL 83

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I       L  ++ +A          +L     +    ++ + +   I ++ + +A++A
Sbjct: 84  FIECLRGVPLIAVLYVA----------MLIVPMALPADALTDKLLRAQIGITLFVSAYLA 133

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++R+GL ++P GQ EAA +LGL + +  +LV+LPQA+R +IP + +  + +L N+SL  
Sbjct: 134 EVIRAGLQSIPAGQTEAAYSLGLGYWRTVQLVVLPQALRIVIPAVVNLSIGILLNTSLLT 193

Query: 343 AVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G +DL++   T     N  G   E  +    +Y ++S   + +   L  K+  ++
Sbjct: 194 VIGISDLLNGAKTAATDPNWLGFYSEAFVFAACVYFAISFGASRYSIWLEPKLRTRK 250



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++ +G+  A  I  L+   R S  +++     +++E  R +P + V++     
Sbjct: 44  GLPITLLVSLTGLATAFPIALLLALARRSEMRILRIFAVLFIECLRGVPLIAVLYVAMLI 103

Query: 152 VLSVLP 157
           V   LP
Sbjct: 104 VPMALP 109


>gi|318059838|ref|ZP_07978561.1| putative glutamate ABC transporter permease protein [Streptomyces
           sp. SA3_actG]
 gi|318077305|ref|ZP_07984637.1| putative glutamate ABC transporter permease protein [Streptomyces
           sp. SA3_actF]
          Length = 214

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + +  LG V++ F     R     + +     +++      L  L    L    
Sbjct: 21  LTVYASLLALALGFVMASF-----RVAPVGSLRVFGTAWVTVLRNTPLTLLFFAVLLGLP 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F   +  Q                 +AL CYT+AFI E +RSG+  VP+GQ EAA +LG
Sbjct: 76  RFGLVLPFQLF-------------AVLALGCYTSAFICEALRSGINTVPKGQGEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    V+LPQA R++IPP+ SQ + L KNS++A A    +L+    T+       +
Sbjct: 123 MSFGQTLTAVILPQAFRAVIPPVGSQLIALAKNSAIAGAFSVTELLGTYKTLNELGFNIV 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + +     YL L++ I+   N L  +  +  
Sbjct: 183 WVFVWIAVGYLILTLAISALFNYLEHRWRVPR 214



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A  +G ++ + R++    +      +V V RN P  ++ F +   
Sbjct: 14  GFLGTLELTVYASLLALALGFVMASFRVAPVGSLRVFGTAWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|330981547|gb|EGH79650.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 236

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 94/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +   V  F + I LS+     +R   ++  +    
Sbjct: 6   QEYWKPFLYTDGVNVTGLAMTMWLLSASIVIGFCVSIPLSI-----ARVSGKRWVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSLAAVREQPML-DAFFRDAMNCTILAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 41.1 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + ++    +   +   R+S  + V W  + Y  +FR  P  + +   Y
Sbjct: 20  VTGLAMTMWLLSASIVIGFCVSIPLSIARVSGKRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSLAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAI 125


>gi|323184372|gb|EFZ69748.1| histidine transport system permease protein hisQ [Escherichia coli
           1357]
          Length = 164

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 1/162 (0%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           ++ + Y L      + +   +G   + P  ++  I L     A+  E  R   +AVP+G 
Sbjct: 1   MLLIFYGLQIALNTVTEAMGVGQIDIDP-MVAGIITLGFIYGAYFTETFRGAFMAVPKGH 59

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EAA A G T  +  R ++ P  MR  +P + + +  +LK+++L   +G  D+V      
Sbjct: 60  IEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQVILKSTALVSLLGLEDVVKATQLA 119

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              T +     ++   IYL  + +    +  L  + ++  K+
Sbjct: 120 GKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERRYSVGVKR 161


>gi|221195858|ref|ZP_03568911.1| permease protein of ABC transporter system [Atopobium rimae ATCC
           49626]
 gi|221184332|gb|EEE16726.1| permease protein of ABC transporter system [Atopobium rimae ATCC
           49626]
          Length = 217

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 14/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L            I  F  V  +++ L  T +      KT      + +   L    P 
Sbjct: 9   YLPLYATAARITIGISFFGIVASLIVGLICTVVV---QAKTPVLRQCVSVYVELSRNTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV + L Y           F            ++  + L+    +++AE +RSG  +V R
Sbjct: 66  LVQLFLIY-----------FGLTKIGIKMDAEVAAVVGLTFLGGSYMAEALRSGFDSVER 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q E+A  LGL+ +++   V+LPQA+   +P L +  + L+K SS+  A+  ADL+ V  
Sbjct: 115 IQEESAWVLGLSQKQSLWYVVLPQALSVSLPSLVANTIFLIKESSVVSAIALADLMFVAK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +I       E + + +  Y+ + + ++L  +RL  +     +
Sbjct: 175 DLIGMMYNTTEALFMLVVAYILILVPVSLMGSRLERRFDYARR 217



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 35/76 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++F G++ + I+G +      +   ++     VYVE+ RN P LV +F +Y  +  +
Sbjct: 20  TIGISFFGIVASLIVGLICTVVVQAKTPVLRQCVSVYVELSRNTPLLVQLFLIYFGLTKI 79

Query: 156 LPIPDHSIVLPFGMFL 171
               D  +    G+  
Sbjct: 80  GIKMDAEVAAVVGLTF 95


>gi|154495952|ref|ZP_02034648.1| hypothetical protein BACCAP_00233 [Bacteroides capillosus ATCC
           29799]
 gi|150274835|gb|EDN01891.1| hypothetical protein BACCAP_00233 [Bacteroides capillosus ATCC
           29799]
          Length = 255

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 8/176 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +  +  ++I G P ++ I   + +     +     F  G   S  F ++ +A     A +
Sbjct: 82  ICRLVVWVIRGTPLILQIIALFYVPGMLDL-----FTWGGGESSRFAAVAVAFIINYACY 136

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            +EI R G+ +VP GQ EA   LG+T  +    V L Q ++ I+PP++++ + L+K++SL
Sbjct: 137 FSEIYRGGIQSVPVGQQEAGQVLGMTRTQIFFKVTLLQMIKRIVPPMSNEIITLVKDTSL 196

Query: 341 AVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A A+   +++ V  + +         +  +      YL  S ++ L + RL  K+A
Sbjct: 197 ARAISLKEVIWVAESFMKGNQGISGLLWPLFFVAVYYLVFSGVVTLLLGRLEKKLA 252


>gi|118590988|ref|ZP_01548388.1| putative transport system permease abc transporter protein [Stappia
           aggregata IAM 12614]
 gi|118436510|gb|EAV43151.1| putative transport system permease abc transporter protein [Stappia
           aggregata IAM 12614]
          Length = 242

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 75/175 (42%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL + T +I  +P LVLI L Y    D                    +    +     A+
Sbjct: 63  LLEVYTTVIRAVPELVLILLLYYAGTDAVNSLLMLAGLPRVDISGLAAGIFVIGVVQGAY 122

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E++R  + A+P GQ+EAA A G++  K  R + LP  +   IP L++ +L   K+++L
Sbjct: 123 STEVLRGAIKAIPPGQIEAARAYGMSPFKTLRRITLPAMLPYAIPGLSNLWLIATKDTAL 182

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              VGF++L  V       T   +        +YL+L+++    +  +  +    
Sbjct: 183 LAVVGFSELTLVTRQAAGATKAYMLFYCAAGVLYLTLTLVSNRVIGHIERRARRG 237


>gi|15890305|ref|NP_355977.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158506|gb|AAK88762.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|325062202|gb|ADY65892.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 234

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 14/202 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V S VLG    +    L R  +    + +   Y+   +I   P LV + + Y 
Sbjct: 22  WLTIKLSVLSIVLGCAFGILLASL-RSINGGIVRIIVDGYVE--VIRNTPFLVQLFIVY- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G         +  I ++   AA+  EI+R+G+ AV + Q+EA  AL
Sbjct: 78  ----------FGLPGLGFRVGADTAALIGMTINLAAYSTEIIRAGIEAVHKSQIEAGEAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R V++  A+  + P L SQ++ ++  SS+  A+   +L +    + +QT ++
Sbjct: 128 GFTKYQIYRHVIIVPAIAKVYPSLCSQFVLMMLASSICSAISTHELAAAAAFVESQTYRS 187

Query: 364 IEIILIWMFIYLSLSIMIALFM 385
            E+ ++   IYL+L++ + L +
Sbjct: 188 FEVYIVVTLIYLALALSLRLIL 209



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 36/89 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G   T  L+   ++     G L+ + R     +V  I   YVEV RN P LV
Sbjct: 12  QYQNELLSGIWLTIKLSVLSIVLGCAFGILLASLRSINGGIVRIIVDGYVEVIRNTPFLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +F +Y  +  +            GM +N
Sbjct: 72  QLFIVYFGLPGLGFRVGADTAALIGMTIN 100


>gi|209546611|ref|YP_002278529.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537855|gb|ACI57789.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 229

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 5/232 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                 +               + V S V G ++++     ++    +  + L   Y + 
Sbjct: 1   MSFTWISSYWPLLLTGAWQTVSLLVISVVFGFIIAIGL-AFAQVSGGRLTRLLARGYCTF 59

Query: 227 FLIFGLPTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F   G P L+ +  L Y +    P++      +    +   F    ++ +   AA+ AE+
Sbjct: 60  F--RGTPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAAYEAEV 117

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  L+AVP+G++EA  A GL+  K  R + LP+A+R  +P +  + +  LK + LA  V
Sbjct: 118 LRGALLAVPKGELEAGRAFGLSPLKLVRRIWLPRAIRIALPTIAGEIVMQLKATPLAFTV 177

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              DL +V   +   T    E +L+    YL L+ +IA     L A++ ++ 
Sbjct: 178 TVMDLYAVANKVRQDTLLVYEPLLVVTVFYLVLTAVIARVFRGLEAQVPVRR 229



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 41/110 (37%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +T  SSY   +L G   T  L    ++   II   +   ++S  +L   + R Y   FR 
Sbjct: 3   FTWISSYWPLLLTGAWQTVSLLVISVVFGFIIAIGLAFAQVSGGRLTRLLARGYCTFFRG 62

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            P L+ ++ LY  V S+LP+        F   L               A 
Sbjct: 63  TPLLIQLWLLYYGVGSLLPMVPGIRQSLFWPILREGFFFAAVSFTLNYAA 112


>gi|66047103|ref|YP_236944.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63257810|gb|AAY38906.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 236

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+   R+SR+   +       
Sbjct: 6   QEYWKPFLYTDGVNVTGLAMTMWLLSASIAIGFCVSIPLSIA--RVSRNRWVRWPVQF-- 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 62  ---YTYLFRGTPLYIQLLICYTGIYSLAAVREQPML-DAFFRDAMNCTILAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  VTGLAMTMWLLSASIAIGFCVSIPLSIARVSRNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSLAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAI 125


>gi|46908517|ref|YP_014906.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b F2365]
 gi|47092445|ref|ZP_00230235.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|254825078|ref|ZP_05230079.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|254854299|ref|ZP_05243647.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|254933325|ref|ZP_05266684.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|300763905|ref|ZP_07073901.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|46881789|gb|AAT05083.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019222|gb|EAL09965.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes str. 4b H7858]
 gi|258607691|gb|EEW20299.1| amino acid ABC transporter [Listeria monocytogenes FSL R2-503]
 gi|293584886|gb|EFF96918.1| amino acid ABC transporter [Listeria monocytogenes HPB2262]
 gi|293594321|gb|EFG02082.1| amino acid ABC transporter [Listeria monocytogenes FSL J1-194]
 gi|300515246|gb|EFK42297.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL N1-017]
 gi|328465382|gb|EGF36629.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 1816]
 gi|328471566|gb|EGF42446.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes 220]
          Length = 235

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 13  MAMLKTIPLTLAMTFFPILFGFIIAIGMT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 72  MLIYLGIPLLVDF-LSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 131 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA   
Sbjct: 191 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYR 231


>gi|325272613|ref|ZP_08138972.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas sp. TJI-51]
 gi|324102255|gb|EGB99742.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas sp. TJI-51]
          Length = 237

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 87/220 (39%), Gaps = 4/220 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                 +    +     + V S  +G  L++    ++R       +    ++  T++  G
Sbjct: 12  YLWFDGYQLSGVAMTLWLLVASIAIGGTLAVPL-AVARVSSNPLLRMP--VWFYTYVFRG 68

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  + + + Y   +   V+     +  +          +A +  T A+  EI    + A
Sbjct: 69  TPLYIQLLILYTGIYSLQVVRDQPTL-DAFFREGMNCTLLAFALNTCAYTTEIFAGAIRA 127

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            P G++EA  A G++     R ++LP A+R  +P  +++ + +L +++LA      DL+ 
Sbjct: 128 TPYGEIEAGRAYGMSTFTLYRRIILPSALRRSLPYYSNEVILMLHSTTLAFTATVPDLLK 187

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           V   + + T  + E   +   +Y  +   +     R   +
Sbjct: 188 VARDVNSATYSSFEAFGLAAVLYALMVFTLVWLFRRCEVR 227



 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T WL  + +     +   +   R+S+N L+      Y  VFR  P  + +  LY
Sbjct: 20  LSGVAMTLWLLVASIAIGGTLAVPLAVARVSSNPLLRMPVWFYTYVFRGTPLYIQLLILY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + D   +  F     N  L    L             +
Sbjct: 80  TGIYSLQVVRDQPTLDAFFREGMNCTLLAFALNTCAYTTEIFAGAI 125


>gi|297156306|gb|ADI06018.1| glutamate transporter permease [Streptomyces bingchenggensis BCW-1]
          Length = 287

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 3/155 (1%)

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           +  +     PVL    FI  +       +L   L+ Y  + +AE+ R+G+ +V RGQ EA
Sbjct: 106 IVVEFFRAMPVLVMIFFIFVALKVQPLPALVAGLTLYNGSVLAEVFRAGVNSVERGQREA 165

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LGL   +    VL+PQ +R+++P + SQ +  LK++SL   + + + +  G  I   
Sbjct: 166 AYSLGLRKTQVMAYVLVPQGVRAMLPAIISQLVVALKDTSLGFLITYEEFLHAGKLIAGN 225

Query: 360 TGQAIEIILIWMFI---YLSLSIMIALFMNRLNAK 391
               +  I + M I   Y+ + ++++ F N +  +
Sbjct: 226 LDYGLPFIPVVMVISPVYIGMCMLLSWFANWVAKR 260



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT          +  +G ++ AGRLS +  V W+  + VE FR +P LV+IFF+
Sbjct: 64  LLRGLGNTLKAFALAAALSLALGAVLAAGRLSDHGPVRWVATIVVEFFRAMPVLVMIFFI 123

Query: 149 YKSV 152
           + ++
Sbjct: 124 FVAL 127


>gi|302522779|ref|ZP_07275121.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
 gi|302431674|gb|EFL03490.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. SPB78]
          Length = 214

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + +  LG V++ F     R     + +     +++      L  L    L    
Sbjct: 21  LTVYASLLALALGFVMASF-----RVAPVGSLRVFGTAWVTVLRNTPLTLLFFAVLLGLP 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F   +  Q                 +AL CYT+AFI E +RSG+  VP+GQ EAA +LG
Sbjct: 76  RFGLVLPFQLF-------------AVLALGCYTSAFICEALRSGINTVPKGQGEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    V+LPQA R++IPP+ SQ + L KNS++A A    +L+    T+       +
Sbjct: 123 MSFGQTLTAVILPQAFRAVIPPVGSQLIALAKNSAIAGAFSVTELLGTYKTLNELGFNIV 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + +     YL L++ I+   N L  +  +  
Sbjct: 183 WVFVWIAVGYLILTLAISALFNYLEHRWGVPR 214



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A  +G ++ + R++    +      +V V RN P  ++ F +   
Sbjct: 14  GFLGTLELTVYASLLALALGFVMASFRVAPVGSLRVFGTAWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|163742410|ref|ZP_02149797.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161384360|gb|EDQ08742.1| polar amino acid uptake family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 258

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 9/232 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                         + T   I V + +LG  L++    L++            ++ +  +
Sbjct: 32  WDWIPTYAPLALEGLWTTIWILVVTSILGFALAVPLG-LAQAVGPWYLSTPARIFCT--V 88

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEI 284
           I G P L+ I L Y       +  QF +I  S + P     +    +AL+   A +  E+
Sbjct: 89  IRGTPLLLQIWLLYYG--LGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGEV 146

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R     V +GQ+EAA A G+      R + LPQA+R+++P L  + +  LK + L   +
Sbjct: 147 MRGAFSGVAKGQLEAAKAYGMPRLTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVATI 206

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              D+ +V   + + T    E +L+   +Y++++ +I L   R   ++  + 
Sbjct: 207 TVLDIYAVSSRVRSDTFIVYEPLLLLALVYMAIAGVITLAFKRFEDRVPQRR 258



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 33/94 (35%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +YA   L G   T W+     I    +   +G  +      ++   R++  V R  P L+
Sbjct: 37  TYAPLALEGLWTTIWILVVTSILGFALAVPLGLAQAVGPWYLSTPARIFCTVIRGTPLLL 96

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            I+ LY  + S+ P            +L      
Sbjct: 97  QIWLLYYGLGSLFPQFPWIRSSELWPYLRQAWPY 130


>gi|327393251|dbj|BAK10673.1| octopine transport system permease protein OccQ [Pantoea ananatis
           AJ13355]
          Length = 239

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 1/187 (0%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++    +  + L   Y   F       LV+    +        +GQ     G   +P F+
Sbjct: 44  AKLSSHRPLRWLGEGYSVIFRGI-PELLVIYLFYFGGSGLITQIGQIFGAQGFIEAPPFL 102

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              +A+   + ++ AE+ R+  +A+ RG++EAA+A G++  +  + +LLPQ  R  +P L
Sbjct: 103 IGALAIGLISGSYQAEVYRAARLALSRGEVEAAVATGMSRWRIRQRILLPQVARYALPGL 162

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           ++ +   LK+S+L    G  +L+         T       LI    YL L+++      R
Sbjct: 163 SNVWQMSLKDSALVSVTGIVELMRASQVAAGSTRDYFTFYLIGGGCYLLLTVLSNRAFLR 222

Query: 388 LNAKIAL 394
           + A++  
Sbjct: 223 VEARLGR 229


>gi|241554228|ref|YP_002979441.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863534|gb|ACS61196.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 213

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V S ++G  +++  + +     ++       ++IS F   G+P LV + L Y L  
Sbjct: 17  VTISVVSILIGFAIAIVISAML-LSQQRLLVLPAKIFISFF--RGVPLLVQLLLIYNL-- 71

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P  ++  + LS  TAA+ AE +R G  +VP G +E+A  +G++
Sbjct: 72  ---------LPAIDINVPSIVAAIVGLSLCTAAYQAENLRGGFASVPMGLVESAEMVGMS 122

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R +  P A+R   P L ++ + +LK SSL   VG  +L  +   +   T   +EI
Sbjct: 123 PVQIFRRIKAPIALRLTFPALVNEAILILKASSLVSVVGVIELTRMAQDLAGSTFLPLEI 182

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                 IY  ++ ++AL    +   +
Sbjct: 183 FASAGLIYFIINWIVALAGGLIERSL 208



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 1/192 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L   + T  ++   ++    I  ++ A  LS  +L+    ++++  FR +P LV +  +
Sbjct: 9   LLQASIYTVTISVVSILIGFAIAIVISAMLLSQQRLLVLPAKIFISFFRGVPLLVQLLLI 68

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  + ++       +    G+ L         L     +          +V         
Sbjct: 69  YNLLPAIDINVPSIVAAIVGLSLCTAAYQAENLRGGFASVPMGLVESAEMVGMSPVQIFR 128

Query: 209 RHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           R       +   P L     LI    +LV +    +L      L    F+     +   +
Sbjct: 129 RIKAPIALRLTFPALVNEAILILKASSLVSVVGVIELTRMAQDLAGSTFLPLEIFASAGL 188

Query: 268 SLYIALSCYTAA 279
             +I       A
Sbjct: 189 IYFIINWIVALA 200


>gi|209547106|ref|YP_002279024.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538350|gb|ACI58284.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 240

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 94/211 (44%), Gaps = 3/211 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I   ++++G+ L LF   L +       +    L   T ++  +P LVLI   Y    
Sbjct: 30  LFISFGAYLVGMALGLFG-ALGKLSGVPPVRF--ALNFYTTVVRAVPELVLIVALYYAGT 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D           G       ++    L     A++ E++R  ++++P GQ+EAA A G+ 
Sbjct: 87  DGLNRALSWAGIGPIEVNGLVAAIAVLGFVQGAYMTEVLRGAILSIPAGQLEAAKAFGMR 146

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++LP  + + +P   + +L+++K+S+L   VG+ +L        + T Q +  
Sbjct: 147 PTLRFRRIILPSLIPNALPGFANLWLSVIKDSALIAVVGYQELALAARVAASNTKQYMLF 206

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L    +YL+++I+  L  + L A     ++
Sbjct: 207 FLAAAMLYLAITIISNLLFSALEAHFRRGQR 237


>gi|313608296|gb|EFR84288.1| arginine transport system permease protein ArtQ [Listeria
           monocytogenes FSL F2-208]
          Length = 120

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 36/115 (31%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
             AA+ AEI R G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+
Sbjct: 1   NYAAYFAEIFRGGFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLV 60

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           K+SSL   +G  DL+  G   +++    I  +++   IYL+L+ ++ +   +L  
Sbjct: 61  KDSSLVYILGIGDLLRAGKIAMSRDVTLIP-LVLVAVIYLALTAILTVLFKQLEK 114


>gi|260769493|ref|ZP_05878426.1| probable amino acid ABC transporter permease protein [Vibrio
           furnissii CIP 102972]
 gi|260614831|gb|EEX40017.1| probable amino acid ABC transporter permease protein [Vibrio
           furnissii CIP 102972]
          Length = 239

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 7/210 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI   S  L  +L+L    L R    +  +     +IS F   G P +  + L Y 
Sbjct: 17  WMTLKITFISVSLAALLAL-PMSLLRIQCSRVYRWPVQWFISFF--RGTPLIAQLFLLYY 73

Query: 244 LHFDK-PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P L +            F    +A +  + A+  EI+R  + +V  G++EAA +
Sbjct: 74  GSGQFRPWLMEMGL--WHFFRDPFNCALLAFTFNSLAYQTEILRGAIQSVDAGEIEAAKS 131

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+ +    R ++LP A R   P L ++ + +LK  ++A  +   DL+       +QT  
Sbjct: 132 MGMNNSLLYRHIVLPLAYRIAFPALGNECILMLKGGAVASVITVMDLMGQTRRAFSQTFD 191

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I    +   +YL ++ +  +   +    +
Sbjct: 192 -ISTYFLAAGLYLIIATVFVMAWRQAERYL 220



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  +  A ++   +   R+  +++  W  + ++  FR  P +  +F L
Sbjct: 12  LLDGAWMTLKITFISVSLAALLALPMSLLRIQCSRVYRWPVQWFISFFRGTPLIAQLFLL 71

Query: 149 YKSVLSVLPIPDHSIVLPFG 168
           Y       P      +  F 
Sbjct: 72  YYGSGQFRPWLMEMGLWHFF 91


>gi|261820774|ref|YP_003258880.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261604787|gb|ACX87273.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 229

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 71/175 (40%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
             T LI G+P LVL+ L +            +            +  I L     A+  E
Sbjct: 51  CYTTLIRGIPDLVLMLLIFYGLQIVLNGVTESIGLEQIDIDPLTAGVITLGFIYGAYFTE 110

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             R   +AVPRGQ+EAA+A G +  K  R +L P  MR  +P + + +  +LK ++L   
Sbjct: 111 TFRGAYLAVPRGQIEAAVAFGFSPLKVFRRILFPSMMRFALPGIGNNWQVILKATALVSL 170

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +G  D++           +     L+   +YL  + +    +  L    +   KK
Sbjct: 171 LGLNDVIKATQLAGKGAHEPFYFALVAGAMYLIFTTVSNGVLWWLERHYSQGVKK 225


>gi|254477906|ref|ZP_05091291.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria sp. R11]
 gi|214028491|gb|EEB69327.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria sp. R11]
          Length = 259

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 9/233 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                +        + T   I V + +LG  L++    L++        A   L+ +  +
Sbjct: 32  WDWIPQYAPLAAEGLWTTVWILVVTSILGFALAVPLG-LAQAIGPWYLAAPARLFCT--I 88

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEI 284
           I G P L+ I L Y       +  QF +I  S + P     +    +AL+   A +  E+
Sbjct: 89  IRGTPLLLQIWLLYYG--LGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGEV 146

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R     V +GQ+EAA + G+      R + LPQA+R+++P L  + +  LK + L   +
Sbjct: 147 MRGAFSGVAKGQLEAAKSFGMPRMTMFRRIWLPQAVRNVLPTLGGETILQLKATPLVATI 206

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              D+ +V   + + T    E +L+   +Y++++ +I L       K+   ++
Sbjct: 207 TVLDIYAVSSRVRSDTFIVYEPLLLLALVYMAIAGVITLGFRWFENKVPSAQR 259



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 31/94 (32%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA     G   T W+     I    +   +G  +      +A   R++  + R  P L+
Sbjct: 37  QYAPLAAEGLWTTVWILVVTSILGFALAVPLGLAQAIGPWYLAAPARLFCTIIRGTPLLL 96

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            I+ LY  + S+ P            +L      
Sbjct: 97  QIWLLYYGLGSLFPQFPWIRSSELWPYLRQAWPY 130


>gi|13474336|ref|NP_105904.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14025089|dbj|BAB51690.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 221

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 3/206 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            + +I V + ++G+++ +      + +     +   LL + T ++  +P LVLI L Y  
Sbjct: 6   HSLEIAVGATIVGLLIGICG-AYGKLYGGPVVRD--LLAVYTTVVRAVPELVLILLLYYA 62

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             D                   ++    L     A+  E++R  ++A+P+GQ+EAA A G
Sbjct: 63  GTDLINQVLTAIGYQRVDISGLVAGIAVLGFCQGAYSTEVMRGAILAIPQGQIEAARAFG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R + LP  +   IP L + +L   K+++L   VGF +L          T   +
Sbjct: 123 MSPSLLLRRITLPAMLPFAIPGLANLWLIATKDTALLAVVGFFELTLATRQAAGVTKAYL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
              L    +YL++++     + R   
Sbjct: 183 IFYLAAGVLYLAVTLFSNFLLGRAEK 208


>gi|227113606|ref|ZP_03827262.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 221

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + + GI + +F   L         +   L  +   LI   
Sbjct: 11  FPFWPELLEGLWVTIELTVMATLGGIAIGIFGAALRSGKPTLLSR---LWGVYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPSLGLKLTAGQ--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAARVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I ++T  + E+ L     YL LS+++   +     + 
Sbjct: 177 ANLIQSRTFLSFEVYLATTLCYLVLSVLMRQLLLLAGRRF 216



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++   +   +L G   T  L     +    IG    A R     L++ +  VYVE+ 
Sbjct: 5   LNFSALFPFWPELLEGLWVTIELTVMATLGGIAIGIFGAALRSGKPTLLSRLWGVYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + S+             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPSLGLKLTAGQAALLAMLIN 100


>gi|300722505|ref|YP_003711795.1| arginine ABC transporter membrane protein [Xenorhabdus nematophila
           ATCC 19061]
 gi|297629012|emb|CBJ89597.1| arginine transport protein (ABC superfamily, membrane) [Xenorhabdus
           nematophila ATCC 19061]
          Length = 222

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 96/228 (42%), Gaps = 10/228 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L     ++       + +F+L +VL++                L   YI+ F   
Sbjct: 4   YIRDILPGLQTSLSLTFTALLTAFILSVVLTMIL-----TIKLPVVSQLVKGYITLFT-- 56

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y      P + ++ ++      P ++   + L+  +AA+  ++    + 
Sbjct: 57  GTPLLVQFFLIYYGPGQFPSIKEYPWLWQLISEP-WLCAMVTLALNSAAYSTQLFYGAVK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P GQ ++  ALG++   +   +LLP A +  +   +++ + + K++SLA  +   D++
Sbjct: 116 AIPAGQWQSCQALGMSKIHSM-RILLPYAFKRALSSYSNEVILIFKSTSLASTITLLDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                   ++   + + +    IYL ++ ++ L M  L  +    E +
Sbjct: 175 GYSQLQFGRSYD-VTVFVAAGIIYLCINGLLTLLMRMLEQRALSFEHR 221



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   +  L F+ ++ A I+  ++         +V+ + + Y+ +F   P LV 
Sbjct: 4   YIRDILPGLQTSLSLTFTALLTAFILSVVLTMILTIKLPVVSQLVKGYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            F +Y        I ++  +           +    L     +    +  V  I   
Sbjct: 64  FFLIYYGPGQFPSIKEYPWLWQLISEPWLCAMVTLALNSAAYSTQLFYGAVKAIPAG 120


>gi|270159601|ref|ZP_06188257.1| amino acid ABC transporter permease protein [Legionella longbeachae
           D-4968]
 gi|289165608|ref|YP_003455746.1| transporter subunit: permease component of ABC superfamily
           transporter [Legionella longbeachae NSW150]
 gi|269987940|gb|EEZ94195.1| amino acid ABC transporter permease protein [Legionella longbeachae
           D-4968]
 gi|288858781|emb|CBJ12686.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Legionella longbeachae NSW150]
          Length = 212

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 10/175 (5%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL+     ++ G P ++ ++  Y   F  P L           +   M+  I     ++A
Sbjct: 47  PLINGFISIMRGTPVILQLSFIY---FAVPALIG-------IKANIMMAGLITFGLNSSA 96

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +IAEI+R+G+  +P+GQ EAA  L + +    + ++LPQ +++++P   ++ + LLK ++
Sbjct: 97  YIAEILRAGIEHLPKGQFEAAKTLHIPNFYLWKDIVLPQVIKNVLPAFINEMIALLKETA 156

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L   +G  DL+    ++  +       + I  F Y +L ++I     ++  + AL
Sbjct: 157 LIATIGGMDLMRRAQSVAAEQFTYFLPLCIAGFYYYALVLLIETLGKKIEQRGAL 211


>gi|167750527|ref|ZP_02422654.1| hypothetical protein EUBSIR_01503 [Eubacterium siraeum DSM 15702]
 gi|167656453|gb|EDS00583.1| hypothetical protein EUBSIR_01503 [Eubacterium siraeum DSM 15702]
 gi|291557064|emb|CBL34181.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Eubacterium siraeum V10Sc8a]
          Length = 219

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 80/190 (42%), Gaps = 13/190 (6%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             + +++     + +  +YI   +    P LV +   Y                    + 
Sbjct: 38  CAVVQYYKVPVIRRIVSVYIE--ISRNTPLLVQLFFIYY-----------GLPKVGIPTD 84

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
                   L+    +++AE  RSGL +V + Q E+A +LG+   +A R V+LPQAM   I
Sbjct: 85  AETCGIAGLAFLGGSYMAEAFRSGLESVDKIQTESAYSLGMNKMQAMRYVILPQAMSVSI 144

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P   +  + L+K +S+  A+   DL+ +   ++       E + + +  YL + + I++ 
Sbjct: 145 PAFVANVIFLMKETSVFSAISLLDLMFMAKDLMGMYNDTTEALCLLVGFYLIILLPISIV 204

Query: 385 MNRLNAKIAL 394
              +  ++  
Sbjct: 205 GTIVERRVRR 214


>gi|83593423|ref|YP_427175.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83576337|gb|ABC22888.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 243

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 7/190 (3%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP-- 264
           + R    K  + L   Y+  F    +P LV + L Y   F  P L   ++       P  
Sbjct: 52  IMRTLPSKGLQRLGAAYVEVF--RNIPLLVQLFLWY---FVLPELLPPSWGLWLKQIPDA 106

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  + + C+T+A +AE +R+G+  +PRGQ  A+ ALGLT  +  R +LLP A+R ++
Sbjct: 107 PFYTSVVGIGCFTSARVAEQIRAGITTLPRGQAMASTALGLTLPQTYRYILLPMALRIVL 166

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           PPLTS++LN +KN+S+A+ +   +L +    +   + Q  E       IY+ +++++   
Sbjct: 167 PPLTSEFLNTVKNTSVALTISLMELTARTRAMQEFSFQVFEAFAAATLIYVLINVVVVAV 226

Query: 385 MNRLNAKIAL 394
           M  +  ++A+
Sbjct: 227 MRVIEHRVAV 236



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 39/82 (47%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + +Y   ++ G   T   A +    A ++G ++G  R   +K +  +   YVEVFRNIP 
Sbjct: 18  NGTYLDTLMSGLYWTMATALAAWALALVLGGMIGIMRTLPSKGLQRLGAAYVEVFRNIPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           LV +F  Y  +  +LP      
Sbjct: 78  LVQLFLWYFVLPELLPPSWGLW 99


>gi|296110572|ref|YP_003620953.1| ABC transporter amino acid permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832103|gb|ADG39984.1| ABC transporter amino acid permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 222

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 96/234 (41%), Gaps = 15/234 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               +   +    +    LT+     I + S ++G V+S    +       K  +    +
Sbjct: 3   FDWHYFFHVFPLLIKALPLTLYLAVGIVIVSLIVGGVISYLGLQ-----SFKPLRWFASV 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S F    +P +V I L Y   +  P L     I           +  AL    AA++A
Sbjct: 58  YVSGF--RAVPAVVQIFLAY---YGLPEL-----IPALKTVSPQTIIIFALGFKYAAYMA 107

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RS + +V  GQ EAA AL +   +    VL PQA  + +P + +  + +LK +SL  
Sbjct: 108 ETFRSAIHSVDYGQQEAAKALHIKQSQYVLRVLWPQAAVNALPTVGNYIIGILKETSLVF 167

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G +++   G  +   + + +E+ +    IY +L +  +     +  +    E
Sbjct: 168 VIGVSEMFGEGKLLAGASFKYLEVYVAVGLIYWALVVAYSSLQRAVEWRFKRFE 221



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 35/69 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++     T +LA   +I + I+G ++    L + K + W   VYV  FR +P +V IF  
Sbjct: 15  LIKALPLTLYLAVGIVIVSLIVGGVISYLGLQSFKPLRWFASVYVSGFRAVPAVVQIFLA 74

Query: 149 YKSVLSVLP 157
           Y  +  ++P
Sbjct: 75  YYGLPELIP 83


>gi|119383778|ref|YP_914834.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373545|gb|ABL69138.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 223

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 11/221 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           MF +        L  +   +  + +   G++ +L    L             LL   T  
Sbjct: 5   MFASGISPQDYWLMAEGAWRTILMTLSAGVLATLLGVALGLLKLMPWRGLRHLLDTVTDS 64

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +  +P LV + L Y                       F +  +AL  + A +I+E+VR  
Sbjct: 65  LRCVPLLVQVTLIYS-----------GLAVLGFRISAFTAGTVALGLFAAGYISEVVREA 113

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP     AA  LG+T  +    V+LP  +R   P      L ++K++S+   +G+ +
Sbjct: 114 VQAVPGNLRRAARGLGMTRFQEYWYVILPLGIRQGFPSWLGIILGIVKDTSVVAVIGYVE 173

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           L+     II +T   + ++ +    Y  +   +++   RL 
Sbjct: 174 LLRATQNIITRTQDPLPLLSLAAVFYFLICFPLSMLGRRLE 214


>gi|284802788|ref|YP_003414653.1| hypothetical protein LM5578_2545 [Listeria monocytogenes 08-5578]
 gi|284995930|ref|YP_003417698.1| hypothetical protein LM5923_2495 [Listeria monocytogenes 08-5923]
 gi|293596749|ref|ZP_05264035.2| amino acid ABC transporter [Listeria monocytogenes J2818]
 gi|284058350|gb|ADB69291.1| hypothetical protein LM5578_2545 [Listeria monocytogenes 08-5578]
 gi|284061397|gb|ADB72336.1| hypothetical protein LM5923_2495 [Listeria monocytogenes 08-5923]
 gi|293592041|gb|EFG00376.1| amino acid ABC transporter [Listeria monocytogenes J2818]
          Length = 236

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 14  MAMLKTIPLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 72

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 73  MLIYLGIPLLVDF-LSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIG 131

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 132 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 191

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA   
Sbjct: 192 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYR 232


>gi|57504977|ref|ZP_00370929.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|305432023|ref|ZP_07401190.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|57019249|gb|EAL55955.1| amino acid ABC transporter, permease protein [Campylobacter coli
           RM2228]
 gi|304445107|gb|EFM37753.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 219

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + + F    +    KI + + ++ I+   F   +++++ ++  + L   YI  F   
Sbjct: 5   FNAQNIEFLMQGLVLTLKIALATCIISIIFGTFL-AITKNYGDRFSRLLATCYIDIFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  L ++A  + L    P + Q  +              I  S YT++ +AEI+R GL 
Sbjct: 64  PL-LLWMLAACFVLPSFFPQMPQAFW------------GTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G +       ++LPQ  R ++P L SQ +  +K+++    +  A+L 
Sbjct: 111 SIPKGQFEAAYSQGFSKFFTLFYIILPQTFRKVVPSLLSQIVTTVKDTAYLAGLQIAELT 170

Query: 351 SVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIA 393
                I+ +     EI+        IY ++   +++ +     K A
Sbjct: 171 YNSKNILARLTSFDEILATIGFVAVIYFAICFSLSMLVRYYAKKTA 216



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G V T  +A +  I + I GT +   +   ++    +   Y+++FRN P L+ +   
Sbjct: 13  LMQGLVLTLKIALATCIISIIFGTFLAITKNYGDRFSRLLATCYIDIFRNTPLLLWMLAA 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
              + S  P    +     G  L    +    +    N+ 
Sbjct: 73  CFVLPSFFPQMPQAFWGTIGFSLYTSSVMAEIIRGGLNSI 112


>gi|330958425|gb|EGH58685.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 225

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 14/213 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I   + +L +VLS FA  L R    +  +    LY+   ++ G+  LVL+   + L
Sbjct: 24  VTLQITFLAELLVLVLS-FAIALMRLSPFRALRWFATLYVE--VLRGISALVLL---FYL 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P+                 +  + L    +A+ +EI+RS LI V +GQ +A  AL 
Sbjct: 78  FFILPLF--------GIRLSPMTTGVLGLGLTFSAYGSEIIRSALINVSQGQRDAVRALD 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
                A R ++LPQA+  +IPP+ +Q + LLK +SL   +   DL   G  ++   GQ  
Sbjct: 130 FGPVSAFRRIILPQALPFMIPPMGNQLVELLKTTSLVSLITLTDLTFSGSQLVTTLGQQT 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I  I +  Y  ++  ++  + R         +
Sbjct: 190 LIWSIVLVCYFMMAWPLSWLVRRYERHATAWRR 222



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G + T  + F   +   ++   +   RLS  + + W   +YVEV R I  LV+
Sbjct: 14  IARQVAHGALVTLQITFLAELLVLVLSFAIALMRLSPFRALRWFATLYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|297564129|ref|YP_003683102.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296848578|gb|ADH70596.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 242

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 13/222 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L           ++ +    L  VL++    +    H    +A+  +Y+  F   G+ 
Sbjct: 6   QRLPLYAEGAWVTIQLTLGGIALAFVLAMVFGIMGTIRH-WLPRAVATVYVEVF--RGIA 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVL+   + + F  P L  +             +  +A+     A+ AE+VRS + AVP
Sbjct: 63  ALVLM---FWMAFALPQLTGYQLADNF-------AAILAVGLNLGAYGAEVVRSSINAVP 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R Q+EA +AL L+  + TRLV+LPQA   ++P   +  + L+K ++++  +G ADL +V 
Sbjct: 113 RPQVEATVALNLSWFQRTRLVVLPQAWAQMLPTFGNLNIELMKATAVSYLIGVADLTAVA 172

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +   TG+ +   +    +Y  ++ ++ L M  L  +   K
Sbjct: 173 QNMRQATGETVIAFIGAFVLYYLIAQVLILGMRLLERRANRK 214



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L   G+  A ++  + G      + L   +  VYVEVFR I  LV++F++  +
Sbjct: 14  GAWVTIQLTLGGIALAFVLAMVFGIMGTIRHWLPRAVATVYVEVFRGIAALVLMFWMAFA 73

Query: 152 VLSV 155
           +  +
Sbjct: 74  LPQL 77


>gi|312972460|ref|ZP_07786634.1| general L-amino acid transport system permease aapM domain protein
           [Escherichia coli 1827-70]
 gi|310334837|gb|EFQ01042.1| general L-amino acid transport system permease aapM domain protein
           [Escherichia coli 1827-70]
          Length = 180

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 13/187 (6%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + L +++I  +    L T++ ++           +    F+   T   + +   + 
Sbjct: 1   MPIVRILSVIFIEFWRGVPLITVLFMS----------SVMLPLFMAEGTSIDKLIRALVG 50

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  +
Sbjct: 51  VILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTII 110

Query: 333 NLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            L K++SL + +G  DL S            G + E  +    IY      ++ +   L 
Sbjct: 111 ALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEGYVFAALIYWIFCFSMSRYSQHLE 170

Query: 390 AKIALKE 396
            +     
Sbjct: 171 KRFNTGR 177


>gi|257063101|ref|YP_003142773.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
 gi|256790754|gb|ACV21424.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
          Length = 230

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 6/213 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               +I   + + G V       L+R         L L++IS   I G P LV + + Y 
Sbjct: 22  PVTFEIVAVATLFG-VALAILLALARIKKVPVLSQLALVFISF--IRGTPLLVQMFIVY- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P+L    F            + I  S     F+AEI RS + +VP  Q EAA ++
Sbjct: 78  --YGMPILLWNVFRVDVNGWQRLTFVMITYSLNQGGFMAEIFRSAIESVPASQTEAAYSV 135

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +    ++LPQA+R+ IP  +   ++L +++SLA  +G  D++     I + T   
Sbjct: 136 GLSGAQTFLRIVLPQAVRTAIPSFSVNLVSLFQDTSLAFMLGVVDVMGRAELIQSATHHV 195

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +E  +I   I++ +SI + +F   L+ ++    
Sbjct: 196 LECYVIITVIFIVISIALRMFFIYLDKRLQYGR 228


>gi|111023903|ref|YP_706875.1| glutamate transport system permease protein GluC [Rhodococcus
           jostii RHA1]
 gi|110823433|gb|ABG98717.1| glutamate transport system permease protein GluC [Rhodococcus
           jostii RHA1]
          Length = 215

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 19/209 (9%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             V + + G +L+ F     R       +++   Y+ TF       +  + L        
Sbjct: 25  STVLALIGGTILASF-----RVSPIPLLQSIGSGYVETFRNVPTAVIYFMTL-------- 71

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                F F       P F +   AL+ Y +AF  E VRSG+ A+P GQ EA  ++GLT  
Sbjct: 72  -----FAFPQLGIKIPFFWAAVAALAIYYSAFFCEAVRSGINAIPVGQFEAGRSIGLTFG 126

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
            + R ++LPQA RS++PPL + ++ L K+S++A A G A+L++    +I +  QA+  IL
Sbjct: 127 GSLRYIVLPQAFRSVVPPLINVFIALTKSSAIASAFGVAELLTRAEGVIAEESQAVLWIL 186

Query: 369 IWM-FIYLSLSIMIALFMNRLNAKIALKE 396
                +YL ++I      N +  K+A+  
Sbjct: 187 AATSLLYLVITIPAGTIANLVEKKVAVAR 215



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A++ GF  T  L     + A I GT++ + R+S   L+  I   YVE FRN+P  V+
Sbjct: 7   HFGALMEGFAVTLTLIGVSTVLALIGGTILASFRVSPIPLLQSIGSGYVETFRNVPTAVI 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            F    +   +             + +         +    NA   
Sbjct: 67  YFMTLFAFPQLGIKIPFFWAAVAALAIYYSAFFCEAVRSGINAIPV 112


>gi|89091827|ref|ZP_01164782.1| hypothetical protein MED92_06666 [Oceanospirillum sp. MED92]
 gi|89083562|gb|EAR62779.1| hypothetical protein MED92_06666 [Oceanospirillum sp. MED92]
          Length = 217

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L+    T+  +        VLG+++       +++ +   G  L +L         +P
Sbjct: 15  FILTGVWNTILISGLSIFVGSVLGVIVGFARAESNKYVNFLFGSVLDVL-------RSVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            ++ + L             F  + GS + P F++  I LS YT AF+AE+ R G  +V 
Sbjct: 68  LIIQLVL----------FSTFMGVMGSPL-PPFVAGTIILSLYTMAFMAEVFRGGFESVN 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
              + A  +LG+T+ +  R V  P  +RS+ P      L+++K+S+L   +G+ +L+   
Sbjct: 117 NSMIIAGRSLGMTYWQTIRHVRFPIGLRSVFPAWLGVALSVIKDSALVSVIGYVELLRTS 176

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I++T Q +EI++     Y  +S  ++++  R+  K AL
Sbjct: 177 DQLISRTQQPLEILIGVGLFYFLISYPLSVYGRRIERKHAL 217



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 1/135 (0%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S    IL G  NT  ++   +   +++G +VG  R  +NK V ++    ++V R++P 
Sbjct: 9   SWSDTGFILTGVWNTILISGLSIFVGSVLGVIVGFARAESNKYVNFLFGSVLDVLRSVP- 67

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L++   L+ + + V+  P    V    +           +       +     + G  L 
Sbjct: 68  LIIQLVLFSTFMGVMGSPLPPFVAGTIILSLYTMAFMAEVFRGGFESVNNSMIIAGRSLG 127

Query: 202 LFATRLSRHFHEKTG 216
           +   +  RH     G
Sbjct: 128 MTYWQTIRHVRFPIG 142


>gi|330983104|gb|EGH81207.1| amino acid ABC transporter protein, permease [Pseudomonas syringae
           pv. aptata str. DSM 50252]
          Length = 121

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 49/106 (46%)

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  +  +P GQ EAA AL        R ++LPQA++ ++P L +  + + K + L   + 
Sbjct: 13  RGAIDDIPAGQWEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVIT 72

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L      I   T +  E   +   ++L++S+  +L    L  +
Sbjct: 73  IPELFQAAKQIAGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 118


>gi|310659739|ref|YP_003937460.1| ABC transporter permease [Clostridium sticklandii DSM 519]
 gi|308826517|emb|CBH22555.1| putative transporter subunit: permease component of ABC superfamily
           transporter [Clostridium sticklandii]
          Length = 223

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 11/206 (5%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + + ++G+   +F   + R+F       +   Y+S F   G P ++ + L +   F  P 
Sbjct: 27  LLAMLIGLGFGIFIG-IVRYFKLPGIDLILRGYVSFF--RGTPLMIQLFLFF---FGLPQ 80

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L              F +  + +S  +AA+IAE  R+ +++V + Q +A +++GLT  + 
Sbjct: 81  L-----FPSLGNIGAFEASVLIMSMNSAAYIAETTRAAILSVDKLQQDAGLSVGLTLWQT 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V LPQA+R  IP   + ++ +++ ++L   +G  DL+ +G        +  EI L  
Sbjct: 136 MLYVQLPQALRVAIPSFGNTFIGIIQGTALTFMLGLNDLMGLGKMKAAVNYKFFEIYLAV 195

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             IY +++++I      L    +   
Sbjct: 196 GLIYWAITLIIGQANKYLEIHYSKGR 221



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 4/155 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  +    M+     G  +G  R      +  I R YV  FR  P ++ +F  
Sbjct: 15  LLSALPITLSVGLLAMLIGLGFGIFIGIVRYFKLPGIDLILRGYVSFFRGTPLMIQLFLF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF----VLGIVLSLFA 204
           +  +  + P   +       + + +   +         A + V        L + L+L+ 
Sbjct: 75  FFGLPQLFPSLGNIGAFEASVLIMSMNSAAYIAETTRAAILSVDKLQQDAGLSVGLTLWQ 134

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           T L     +    A+P    +   I     L  + 
Sbjct: 135 TMLYVQLPQALRVAIPSFGNTFIGIIQGTALTFML 169


>gi|148652491|ref|YP_001279584.1| polar amino acid ABC transporter inner membrane subunit
           [Psychrobacter sp. PRwf-1]
 gi|148571575|gb|ABQ93634.1| polar amino acid ABC transporter, inner membrane subunit
           [Psychrobacter sp. PRwf-1]
          Length = 224

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 10/222 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               +S   +T+       V    LG VL++      R    K  +    LY++ F    
Sbjct: 12  YPSLISGMIVTLKVLLLAIVGGMALGTVLAMM-----RLSGIKALELPAKLYVNFFRSVP 66

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L  ++L       +F  P++         T    F S  +A   + AA+ +E+VR+G+ +
Sbjct: 67  LLLILL-----WFYFAVPMIYNGLTGSYITFDTAFTSCVVAFMVFEAAYFSEVVRAGIQS 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +   Q+ AA ALG+T+ +  RL++LPQA R + P +  Q + L ++++L  A+G +D   
Sbjct: 122 IGSAQVNAAKALGMTYAQTMRLIILPQAFRKMTPLILQQCIILFQDTTLVFAIGLSDFFR 181

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                    G     IL    +Y  +S++ ++ + RL   + 
Sbjct: 182 SAYVRGELMGYLTPYILGAGAVYFIISLIASIGVQRLQKSMR 223



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  +    ++    +GT++   RLS  K +    ++YV  FR++P L+++ + 
Sbjct: 15  LISGMIVTLKVLLLAIVGGMALGTVLAMMRLSGIKALELPAKLYVNFFRSVPLLLILLWF 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y +V  +      S +     F +
Sbjct: 75  YFAVPMIYNGLTGSYITFDTAFTS 98


>gi|28871280|ref|NP_793899.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213970885|ref|ZP_03399008.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301383765|ref|ZP_07232183.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302133659|ref|ZP_07259649.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|28854530|gb|AAO57594.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213924408|gb|EEB57980.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|331015688|gb|EGH95744.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 236

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+   R+SR+   +       
Sbjct: 6   QEYWKPFLYTDGVNITGLAMTMWLLSASIAIGFCVSIPLSIA--RVSRNRWVRWPVQF-- 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 62  ---YTYLFRGTPLYIQLLICYTGIYSIAAVREQPML-DAFFRDAMNCTILAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  ITGLAMTMWLLSASIAIGFCVSIPLSIARVSRNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSIAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAI 125


>gi|85704452|ref|ZP_01035554.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670860|gb|EAQ25719.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 248

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 97/230 (42%), Gaps = 4/230 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L F  F N+         M  + K+      + +V+ +     ++    +  + +   YI
Sbjct: 18  LNFSPFYNSYDWGRLVEGMWVSVKLITAIIAVSLVIGVIG-AGAQTSRLRIIRWMVSAYI 76

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F     P + L+   + L    P +    +   +     F    IA+  +  ++  EI
Sbjct: 77  EIFR-NTPPIVQLLFFYFGLGAITPQVDMGGWYEPAI--GSFGWAVIAIGIFGGSYNVEI 133

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG+ AVP    EAA +LG +  K    V  P A+R  +P LT+  ++L K SSLA  +
Sbjct: 134 FRSGIEAVPASTKEAAESLGFSGFKIFVYVTFPLALRICLPALTNNIVSLAKTSSLAYVI 193

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              ++      I + +    E++L+    Y+ L  +IA  M  +  KIAL
Sbjct: 194 AVPEITYSLSGIWSDSVNVPEMMLLLFGYYIVLIAIIARIMTMIERKIAL 243



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 47/109 (43%), Gaps = 5/109 (4%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           ++     L +  G        P+ +   +   ++ G   +  L  + +  + +IG +   
Sbjct: 5   IAPFFERLYDTTGLNFS----PFYNSYDWGR-LVEGMWVSVKLITAIIAVSLVIGVIGAG 59

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            + S  +++ W+   Y+E+FRN PP+V + F Y  + ++ P  D     
Sbjct: 60  AQTSRLRIIRWMVSAYIEIFRNTPPIVQLLFFYFGLGAITPQVDMGGWY 108


>gi|307308378|ref|ZP_07588083.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|306901179|gb|EFN31786.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 222

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 14/228 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                    ++   S V G+ L +    L R       + + + 
Sbjct: 1   MQYSFDFAPVFAAWPMFLEGAIQTLRMSAISMVAGLALGIVFM-LMRISRLGPVRTIAIG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   LI   P LV +   Y           F             +  +A+S   AA+ A
Sbjct: 60  YIE--LIRNTPFLVQVFFIY-----------FGMPTLGIKLGGEEAAILAMSLNCAAYAA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR G+ ++  GQ+EA  ALGL      R ++   A+R++ P L SQ++ ++ NSSL  
Sbjct: 107 EIVRGGVQSIRPGQIEAGRALGLHTIDIYRFIVFRPAIRAVYPALCSQFILMMLNSSLVA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +V   +L  +  T+  QT ++ EI  +   IYL LS   ++ +  +  
Sbjct: 167 SVSAEELTYMAQTLDAQTFRSFEIYFVLGAIYLLLSQFFSVALQFIGR 214



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q    +    +     L G + T  ++   M+    +G +    R+S    V  I   Y
Sbjct: 1   MQYSFDFAPVFAAWPMFLEGAIQTLRMSAISMVAGLALGIVFMLMRISRLGPVRTIAIGY 60

Query: 133 VEVFRNIPPLVVIFFLYKSVL 153
           +E+ RN P LV +FF+Y  + 
Sbjct: 61  IELIRNTPFLVQVFFIYFGMP 81


>gi|307296170|ref|ZP_07576000.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|306496144|gb|EFM65724.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
          Length = 214

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 19/206 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + S  LGI+++            K  + L  LYI  +L+ G P L+ +   +  
Sbjct: 22  VFFFTLLGSIPLGIIIAFILQ-----SSFKPLRYLINLYI--WLMRGTPLLLQLIFVF-- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P++          V   + +   A     AA+ AEI   G+ A+P+GQ EAA  L 
Sbjct: 73  -YGLPLI--------GIVFERYDAALFAFILNYAAYFAEIFHGGIQAIPQGQYEAAKVLR 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    ++LPQ ++ ++P + ++ +NL+K++SL   +G  DL+  G   +++    +
Sbjct: 124 LTRFQTVTRIILPQVVKIVLPSVGNEIINLVKDTSLIYVLGLGDLLRAGKIAMSRD-VTL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
             + +   IYL  + ++ +   ++  
Sbjct: 183 VPLALVGVIYLLFTAILTVASKKIEK 208



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 40/104 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
              A++ G   T  + F  ++ +  +G ++     S+ K + ++  +Y+ + R  P L+ 
Sbjct: 8   ILPALVSGAGMTLKVFFFTLLGSIPLGIIIAFILQSSFKPLRYLINLYIWLMRGTPLLLQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + F++  +  +  + +      F   LN              A 
Sbjct: 68  LIFVFYGLPLIGIVFERYDAALFAFILNYAAYFAEIFHGGIQAI 111


>gi|325121843|gb|ADY81366.1| polar amino acid transport system permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 211

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 8/177 (4%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           T +   L  I+ F I       L+   + L++  P L              F    I L+
Sbjct: 35  TYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL--------GIKIDGFACGVIGLT 86

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L
Sbjct: 87  FLGGSYMAEAFRAGLQSVAKGQIDSAKSIGLQPIQIFRYVIFPQALAISIPAIGANCLFL 146

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +K SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  +
Sbjct: 147 IKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLIILLPVSILTSYLEHR 203


>gi|308177957|ref|YP_003917363.1| glutamate ABC transporter inner membrane subunit GluD [Arthrobacter
           arilaitensis Re117]
 gi|307745420|emb|CBT76392.1| glutamate ABC transporter, inner membrane subunit GluD
           [Arthrobacter arilaitensis Re117]
          Length = 303

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 107/256 (41%), Gaps = 16/256 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V + +                   G    N  L     T+       + S + G++  +
Sbjct: 32  IVAWIIMGLAAKDQMQVSQWDDFIEGSTWKNYLLPGLWNTLKAALFGIIGSVIFGLIFGV 91

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    K       + +  F    +  +++    +           F        
Sbjct: 92  -----GRLSQNKLINGFCTVIVEFFRAVPVLLMIVFFNVF-----------FARSLALPG 135

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                ++  AL  Y  + +AE+VRSG+  +PRGQ EA IA+GLT   + R + +PQA+ +
Sbjct: 136 DTAMWAVVAALVFYNGSVVAELVRSGVHNLPRGQREAGIAIGLTRGMSLRHIEIPQALVA 195

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P L  Q++ +LK+S+L   + F +L+    T  +  G  ++ +++   I++ ++  ++
Sbjct: 196 MLPALIGQFVVILKDSALGYIISFNELLFFARTYSSPNGNVLQALIVAAAIFILINFTLS 255

Query: 383 LFMNRLNAKIALKEKK 398
                ++++++ + KK
Sbjct: 256 KIAVLVSSRLSSRVKK 271



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 17/144 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            +   + + I+ AL+   I  W +  +                  +   ++ Q    +  
Sbjct: 14  AKRRILLINIVGALIAAGIVAWIIMGLAA----------------KDQMQVSQ-WDDFIE 56

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S++   +L G  NT   A  G+I + I G + G GRLS NKL+   C V VE FR +P 
Sbjct: 57  GSTWKNYLLPGLWNTLKAALFGIIGSVIFGLIFGVGRLSQNKLINGFCTVIVEFFRAVPV 116

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVL 165
           L++I F        L +P  + + 
Sbjct: 117 LLMIVFFNVFFARSLALPGDTAMW 140


>gi|118469776|ref|YP_887059.1| glutamate transporter permease GluD [Mycobacterium smegmatis str.
           MC2 155]
 gi|118171063|gb|ABK71959.1| glutamate transporter permease protein GluD [Mycobacterium
           smegmatis str. MC2 155]
          Length = 299

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 112/260 (43%), Gaps = 15/260 (5%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            I  LVV F L++         +               L     T+   A       ++ 
Sbjct: 28  VIGTLVVAFVLWQLWTKNQLTSEKWEPFLTANLWKTYVLPGVQGTLTAAAVS-----IVL 82

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            +    A  + R    +  + +  + +  F    +P L+++   Y  +    V       
Sbjct: 83  ALALGLALGVGRLAPIRPIRWVCTVIVEFF--RAVPVLIMMIFAYFFYAAYDVFP----- 135

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
              +       +   L+ Y  + IAEIVR+G+ ++PRGQ EAA +LGL+  +  R++ LP
Sbjct: 136 ---SKHLALAGVITGLTLYNGSVIAEIVRAGVHSLPRGQSEAAASLGLSWWQTMRMIQLP 192

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA+ +++P L SQ + +LK++++   + F ++V  G  I +  G  +  +++   + +S+
Sbjct: 193 QAITAMLPVLVSQLVVVLKDTAIGYQITFVEMVRQGTVIGSSYGNYLPALIVIAVLMISV 252

Query: 378 SIMIALFMNRLNAKIALKEK 397
           +  ++    R+  ++    +
Sbjct: 253 NFALSALATRIERRLRRSTR 272



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 17/148 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            RV N  +  + A++ T++  + +  ++   + +                  +   P+ +
Sbjct: 15  ARVRNGILTAVSAVIGTLVVAFVLWQLWTKNQLT-----------------SEKWEPFLT 57

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            + + T +L G   T   A   ++ A  +G  +G GRL+  + + W+C V VE FR +P 
Sbjct: 58  ANLWKTYVLPGVQGTLTAAAVSIVLALALGLALGVGRLAPIRPIRWVCTVIVEFFRAVPV 117

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L+++ F Y    +    P   + L   +
Sbjct: 118 LIMMIFAYFFYAAYDVFPSKHLALAGVI 145


>gi|261884808|ref|ZP_06008847.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 221

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/198 (26%), Positives = 100/198 (50%), Gaps = 18/198 (9%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
              +  T   +      +GIVL      L +  + K    +   YI   ++ G P L+ +
Sbjct: 39  YVDSYFTTLGLTFGGIFIGIVLGFILAFL-KFLNIKILSFIIDEYID--IVRGTPVLLQL 95

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            +             F F+  +T+S  F +  IAL   ++A++AEIVRSG+ +V +GQME
Sbjct: 96  MI-------------FAFVILATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQME 142

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA A+GL++  + R ++ PQA+++I+P L +++++L K +S+   +G  DL     ++  
Sbjct: 143 AARAMGLSYSVSMRQIIFPQAVKNILPALANEFISLFKETSVVGLIGIFDLTMQSKSLQA 202

Query: 359 QTGQAIEIILIWMFIYLS 376
                +  + ++  +Y+ 
Sbjct: 203 T--LLVPSLSLFAGVYIL 218



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 42/92 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P +   +   A +  +  T  L F G+    ++G ++   +    K++++I   Y+++ R
Sbjct: 28  PVSITDAQKGAYVDSYFTTLGLTFGGIFIGIVLGFILAFLKFLNIKILSFIIDEYIDIVR 87

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
             P L+ +      +L+ L    ++ V+  G+
Sbjct: 88  GTPVLLQLMIFAFVILATLSDNFYAAVIALGL 119


>gi|126667082|ref|ZP_01738057.1| putative amino acid ABC transporter permease protein [Marinobacter
           sp. ELB17]
 gi|126628488|gb|EAZ99110.1| putative amino acid ABC transporter permease protein [Marinobacter
           sp. ELB17]
          Length = 241

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 98/243 (40%), Gaps = 18/243 (7%)

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
                     D+              L+   +T+  +    +   V+ I+L++     S+
Sbjct: 12  FLTTESGQGMDYEFHWNVVFQNMPELLNGAFVTLHVSVLAMLLGIVIAILLAIAKMNNSK 71

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                     P  YI+T  +        +   Y  +F    L              ++++
Sbjct: 72  ----------PYCYIATTWVEIARNTPALFQIYMAYFGLGAL--------GIHLSPYVAV 113

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
             AL    A ++ E  R G  ++P  Q  A+ +LG+T  +  R ++LPQ +R I  P+T+
Sbjct: 114 LSALVFINAGYLTETFRGGFQSIPNTQYSASKSLGMTSIQVYRYIILPQMLRRIYHPMTN 173

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           Q++  +  SSL + VG  +L      + + + + +E  ++   +Y  ++ ++ +  + L+
Sbjct: 174 QFVWSILMSSLGILVGMGELSGTTQRLQSLSFRTLEFFMVAAVMYFIITKLVLISSSLLS 233

Query: 390 AKI 392
            K+
Sbjct: 234 RKL 236



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   M+   +I  L+   +++ +K   +I   +VE+ RN P L  I+  
Sbjct: 37  LLNGAFVTLHVSVLAMLLGIVIAILLAIAKMNNSKPYCYIATTWVEIARNTPALFQIYMA 96

Query: 149 YKSVLSVLPI 158
           Y  + ++   
Sbjct: 97  YFGLGALGIH 106


>gi|288960220|ref|YP_003450560.1| ABC transporter permease protein [Azospirillum sp. B510]
 gi|288912528|dbj|BAI74016.1| ABC transporter permease protein [Azospirillum sp. B510]
          Length = 223

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 13/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +     V G+ +      + R    ++     L +   +          +   +   +
Sbjct: 25  LLLSFCGIVAGVAIGGVLAAM-RLSGRRSLSWPALAFTEFYRNTPP-----LVHFFWFFY 78

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+             P F +   AL   +AAF AE+ R G+++V RGQ EA  ALG+ 
Sbjct: 79  GLPMAFGLTL-------PPFAAALAALGIQSAAFFAEVFRGGILSVERGQWEAGRALGMG 131

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++LPQA R +  P   +   L+K ++LA A+ F + +     I+ QT + +E+
Sbjct: 132 RARLMRRIILPQAARRMAAPFVERSFELVKTTTLAAALAFHETIYSAMVIVTQTYRPLEV 191

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   ++  +    +     L A+      +
Sbjct: 192 YTVVAGLFFIVLFSASQLAEWLEARGRRAGAR 223



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           A  +L G   T  L+F G++    IG ++ A RLS  + ++W    + E +RN PPLV  
Sbjct: 14  ADILLAGLGQTLLLSFCGIVAGVAIGGVLAAMRLSGRRSLSWPALAFTEFYRNTPPLVHF 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           F+ +  +     +                   F  +       +    +  G  L +   
Sbjct: 74  FWFFYGLPMAFGLTLPPFAAALAALGIQSAAFFAEVFRGGILSVERGQWEAGRALGMGRA 133

Query: 206 RLSRHF 211
           RL R  
Sbjct: 134 RLMRRI 139


>gi|167841845|ref|ZP_02468529.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia thailandensis MSMB43]
          Length = 229

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 13/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L       N  L                +    I  ++   R++R       +AL   Y 
Sbjct: 9   LRHLFSYYNAALLVQGFVATLVLSAVGCAAGFAIGFAVAVVRVTRTRALAPVRALLFAYC 68

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       LV + L +           F           F    +++S   +A++ EI
Sbjct: 69  VVFRRIPF--LVKLMLVF-----------FASQSSGAKLSTFAVALVSVSLIASAYLGEI 115

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VRSGL +V   Q EAA+ L   + K  R V++PQA R I+PP    ++  +K+++LA  +
Sbjct: 116 VRSGLESVHPNQREAAVTLNFGYLKMLRYVVVPQAWRVIVPPTFGFFVMFIKDTALASQI 175

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  +L S G  + ++   A  +    + +Y  +S  ++ F   L   +A    +
Sbjct: 176 GVMELTSAGKVLNDKGFSAGLVYGAILLLYFVMSYPLSRFGKHLEKSLAATRNR 229



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 83  SSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANK---LVAWICRVYVEVFRN 138
           S Y  A+LV GFV T  L+  G      IG  V   R++  +    V  +   Y  VFR 
Sbjct: 14  SYYNAALLVQGFVATLVLSAVGCAAGFAIGFAVAVVRVTRTRALAPVRALLFAYCVVFRR 73

Query: 139 IPPLVVIFFLYKSV 152
           IP LV +  ++ + 
Sbjct: 74  IPFLVKLMLVFFAS 87


>gi|254994369|ref|ZP_05276559.1| amino acid ABC transporter, permease protein [Listeria
           monocytogenes FSL J2-064]
          Length = 235

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 13  MAMLKTIPLTLAMTFFPILFGFIIAIGMT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 72  MLIYLGIPLLVDF-LSKSFGLGISANKIPVVIFVIIALSFTAGAYLTEILRSGIIAVDIG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 131 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L    A   
Sbjct: 191 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNXAKYR 231


>gi|218198736|gb|EEC81163.1| hypothetical protein OsI_24129 [Oryza sativa Indica Group]
          Length = 180

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 13/187 (6%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               + L +++I  +    L T++ ++           +    F+   T   + +   + 
Sbjct: 1   MPVVRVLSVIFIEFWRGVPLITVLFMS----------SVMLPLFMAEGTTIDKLIRALVG 50

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +  + +A++AE+VR GL A+P+GQ EAA +L L + K   LV+LPQA++ +IP L +  +
Sbjct: 51  VILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQGLVILPQALKLVIPGLVNTII 110

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            L K++SL + +G  DL S            G + E  +    IY      ++ +   L 
Sbjct: 111 ALFKDTSLVIIIGLFDLFSSVQQATVDPVWLGMSTEGYVFAALIYWIFCFSMSRYSQHLE 170

Query: 390 AKIALKE 396
            +     
Sbjct: 171 KRFNTGR 177


>gi|257070103|ref|YP_003156358.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560921|gb|ACU86768.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 232

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 14/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + V  + L ++L      ++R       +    +Y+  F    L +          
Sbjct: 17  TTVALTVIGYALALILGTLL-AVARVSPIPPLRGAATVYVEIFRNIPLLS---------- 65

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +L  F       + P F    + L+  +AAF+ E VRSG+  VP G  EAA ++G
Sbjct: 66  ---LLILISFGLPDVGLLLPYFWCGVLGLTLSSAAFVCENVRSGINTVPIGHAEAARSIG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L      RLV+LPQA RS++ PL + ++  +  S+L  A+   ++  V  T+  +  QA+
Sbjct: 123 LGFFGTLRLVVLPQAFRSMVQPLVNVFIGTVIGSALCSAIAVQEVTWVTQTLNIRYAQAV 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + LI   +YL LS+  A     +   +A
Sbjct: 183 LMFLIAGAVYLILSLGGAALGGVIERAVA 211



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 39/84 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L   G   A I+GTL+   R+S    +     VYVE+FRNIP L ++  +
Sbjct: 11  LLQGIGTTVALTVIGYALALILGTLLAVARVSPIPPLRGAATVYVEIFRNIPLLSLLILI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
              +  V  +  +      G+ L+
Sbjct: 71  SFGLPDVGLLLPYFWCGVLGLTLS 94


>gi|118589036|ref|ZP_01546443.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
 gi|118438365|gb|EAV44999.1| amino acid ABC transporter, permease protein [Stappia aggregata IAM
           12614]
          Length = 367

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 18/266 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           P      +   +  V+       +L   +F +   L      +     + +   V GIV 
Sbjct: 112 PNAPFKKINAILFLVVFPIVAYYLLTGLVFGDVVILPIVETAVWGGLLVTLVIAVTGIVA 171

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           SL    A  L R       K + +++I  +         LI + +      P+     F+
Sbjct: 172 SLPLGIALALGRRSKMPIIKLVSIIFIEFWRGVP-----LITVLFMSSVVLPL-----FL 221

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + + + I ++ ++AA++AE+VR GL A+P+GQ E A+ALGL       L++LP
Sbjct: 222 PDGVTFDKLLRVLIGVTLFSAAYMAEVVRGGLQAIPKGQYEGAMALGLRFWPMMYLIILP 281

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMF 372
           QA++ +IP + + ++ L K+++L + VG  DL+    +       +         L    
Sbjct: 282 QALKLVIPGIVNTFIGLFKDTTLVLIVGMFDLLGQIQSSFTDPTWSTPSTGHTGYLFAAV 341

Query: 373 IYLSLSIMIALFMNRLNAKIALKEKK 398
           ++ +    ++ +   +  K+    K+
Sbjct: 342 VFWTFCFGMSRYSIFMENKLHTGHKR 367



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 37/72 (51%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           TA+  G + T  +A +G++ +  +G  +  GR S   ++  +  +++E +R +P + V+F
Sbjct: 152 TAVWGGLLVTLVIAVTGIVASLPLGIALALGRRSKMPIIKLVSIIFIEFWRGVPLITVLF 211

Query: 147 FLYKSVLSVLPI 158
                +   LP 
Sbjct: 212 MSSVVLPLFLPD 223


>gi|50122415|ref|YP_051582.1| putative amino acid ABC transporter permease [Pectobacterium
           atrosepticum SCRI1043]
 gi|261822706|ref|YP_003260812.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|49612941|emb|CAG76392.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium atrosepticum SCRI1043]
 gi|261606719|gb|ACX89205.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 222

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 14/219 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +    ++ V + + GI + +    L         +   L  I   LI   P
Sbjct: 12  PFWPELLAGLWVTIELTVMATLGGIAIGICGAALRSGKPTLLSR---LWGIYVELIRNTP 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   P
Sbjct: 69  FVVQL---FFIVFGLPSLGWKLTAGE--------AALLAMLINLGAYSTEIIRAGIQVTP 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V + +L    
Sbjct: 118 KGQWEAARVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I ++T  + E+ L     YL LS+++   +     + 
Sbjct: 178 NLIQSRTFLSFEVYLATTLCYLVLSVLMRQLLLLAGRRF 216



 Score = 39.9 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++   +   +L G   T  L     +    IG    A R     L++ +  +YVE+ 
Sbjct: 5   LNFSALLPFWPELLAGLWVTIELTVMATLGGIAIGICGAALRSGKPTLLSRLWGIYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P +V +FF+   + S+
Sbjct: 65  RNTPFVVQLFFIVFGLPSL 83


>gi|84685380|ref|ZP_01013278.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666537|gb|EAQ13009.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Rhodobacterales bacterium HTCC2654]
          Length = 433

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 22/297 (7%)

Query: 104 MIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           +    ++      G ++   LV+ I  +   +   + P++   FL   +   +      +
Sbjct: 156 IWTPLLVAAGPALGFVAYRYLVSVIGNLASVIVAVLIPVLFWLFLVGPLSQAI----DGV 211

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           V      + +R      L++         S VLG++L+L      R       K L + +
Sbjct: 212 VPLGIEVVESRLFGGFMLSVWIGVVAIAISLVLGVILAL-----GRQSDLLIVKYLSVGF 266

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I       L TL+ +A      F  P           T     + + I  + + +A+IAE
Sbjct: 267 IEFIRGVPLITLLFVASTLLNIFMPP----------GTNFDIILRVMIMATLFASAYIAE 316

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R GL A+PRGQ EAA ALGL + KA RL++LPQA++  IP + S ++ L K+++L   
Sbjct: 317 VIRGGLAALPRGQYEAADALGLDYWKAQRLIILPQALKISIPGIVSTFIGLFKDTTLVSI 376

Query: 344 VGFAD---LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +G  D   L        N  G   E+      ++      ++ +   L  K+    +
Sbjct: 377 IGLLDPIGLTGSIRADANWNGIVWELYGFIALLFFISCFSMSRYSMWLEKKLRTDHR 433



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 37/77 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  GF+ + W+    +  + ++G ++  GR S   +V ++   ++E  R +P + ++F  
Sbjct: 223 LFGGFMLSVWIGVVAIAISLVLGVILALGRQSDLLIVKYLSVGFIEFIRGVPLITLLFVA 282

Query: 149 YKSVLSVLPIPDHSIVL 165
              +   +P   +  ++
Sbjct: 283 STLLNIFMPPGTNFDII 299


>gi|315283401|ref|ZP_07871605.1| L-cystine transport system permease protein TcyM [Listeria marthii
           FSL S4-120]
 gi|313612950|gb|EFR86888.1| L-cystine transport system permease protein TcyM [Listeria marthii
           FSL S4-120]
          Length = 237

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 3/214 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKY 242
                +  F  + G ++++  T L R +H +  + +   Y+S F        ++LI L  
Sbjct: 22  PLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHIMLIYLGI 80

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L  D  +   F+    +   P  + + IALS    A++ EI+RSG+IAV  GQMEAA +
Sbjct: 81  PLIVDF-LSKSFDLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYS 139

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   + +    
Sbjct: 140 MGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYA 199

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +E  +    IY  L+++I      L   IA  +
Sbjct: 200 FLEAFIGAALIYWFLTMLIEAINYILEKNIAKYQ 233


>gi|260461091|ref|ZP_05809340.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033125|gb|EEW34387.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 218

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 14/201 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   +   + + G +LS+      R+      +A+        ++   P LV +   +  
Sbjct: 19  TTILLIAVTTLAGTLLSILGAAGRRNGPVALKRAIA---CYVEVMRNTPFLVQLFFIF-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F            ++  +A++   AA+  EIV +GL AVP GQ EAA+ALG
Sbjct: 74  ---------FGLPSLGIRLDPILAAMLAMTLNMAAYTIEIVGAGLDAVPGGQTEAALALG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+    ++LPQA++ I P LTSQ + ++  S++   +   +L      +  +T ++ 
Sbjct: 125 LRPRQVFIKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTYEADMLQARTFRSF 184

Query: 365 EIILIWMFIYLSLSIMIALFM 385
           E   +   +YL LS+ +   +
Sbjct: 185 ETYFVVTLVYLLLSMALRRLL 205



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 39/96 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L     +  T++  L  AGR +    +      YVEV RN P LV +FF++  
Sbjct: 16  GAATTILLIAVTTLAGTLLSILGAAGRRNGPVALKRAIACYVEVMRNTPFLVQLFFIFFG 75

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + S+    D  +     M LN    +   +    +A
Sbjct: 76  LPSLGIRLDPILAAMLAMTLNMAAYTIEIVGAGLDA 111


>gi|121609554|ref|YP_997361.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554194|gb|ABM58343.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 223

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 14/228 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L            + + +  +G+ + +    L+R       +    +
Sbjct: 1   MDYTFQFGSVWAALPRLAQGAQLTVLLSLAAIAIGLAIGVL-CALARTSRRAWLRWPAAV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+ +  I   P L+ + L Y           F             +  + +S    A+  
Sbjct: 60  YVES--IRNTPFLIQLFLIY-----------FGLASLGLRLDPIDAALVGMSINCGAYAT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ A+  GQ+EAA ALG       R V++  A+R++ P L SQ+L ++  S++  
Sbjct: 107 EIVRAGIDAIAGGQLEAAHALGFPVPAIVRHVIVFPALRAVFPALASQFLLVMLGSAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +   +L  V   I  +  +  E+ ++   IYL+++  + L    +  
Sbjct: 167 TISVEELTGVAHLIETENFRPFEVYIVVTGIYLAIAFSLKLVFAAVER 214



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 35/84 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L+ + +     IG L    R S    + W   VYVE  RN P L+ +F +
Sbjct: 17  LAQGAQLTVLLSLAAIAIGLAIGVLCALARTSRRAWLRWPAAVYVESIRNTPFLIQLFLI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  + S+    D       GM +N
Sbjct: 77  YFGLASLGLRLDPIDAALVGMSIN 100


>gi|29829029|ref|NP_823663.1| glutamate transporter permease [Streptomyces avermitilis MA-4680]
 gi|29606135|dbj|BAC70198.1| putative glutamate ABC transporter permease [Streptomyces
           avermitilis MA-4680]
          Length = 301

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 17/256 (6%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
                  +    L                         T+   A   V +  LG VL + 
Sbjct: 33  WWVITSLNDKDQLAWEKWKPFFSSTEAWTTYLWPGLQNTLKAAALSMVIAMPLGAVLGIA 92

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             RLS H   +   ++ + +        +P L+L+     L+ +        +   S+  
Sbjct: 93  --RLSDHRWVRVPVSIVVEF-----FRAIPVLILMIFGVALYSE--------YTNVSSDD 137

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
               ++   L  Y A+ +AEIVR+G++++P+GQ EAA+A+GL   +  R +LLPQA+  +
Sbjct: 138 RPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQSEAAMAIGLRKNQVMRFILLPQAVTVM 197

Query: 324 IPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
           +P + SQ + ++K+++L    + F++L++  G +    G   I    I   IY++++  +
Sbjct: 198 LPAIVSQLVVIVKDTALGGAVLTFSELLASVGPMSGYYGANTIASFTIVALIYIAINFSL 257

Query: 382 ALFMNRLNAKIALKEK 397
             F + L  ++   +K
Sbjct: 258 TTFASWLEGRLRRGKK 273



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 39/88 (44%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++S  ++ T +  G  NT   A   M+ A  +G ++G  RLS ++ V     + VE FR 
Sbjct: 54  FSSTEAWTTYLWPGLQNTLKAAALSMVIAMPLGAVLGIARLSDHRWVRVPVSIVVEFFRA 113

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           IP L+++ F          +      L 
Sbjct: 114 IPVLILMIFGVALYSEYTNVSSDDRPLY 141


>gi|313607195|gb|EFR83666.1| L-cystine transport system permease protein TcyM [Listeria
           monocytogenes FSL F2-208]
          Length = 235

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 13  MAMLKTIPLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 72  MLIYLGIPLLVDF-LSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 131 QMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA  +
Sbjct: 191 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYQ 231


>gi|224499026|ref|ZP_03667375.1| hypothetical protein LmonF1_04713 [Listeria monocytogenes Finland
           1988]
          Length = 235

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H +  + +   Y+S F        +
Sbjct: 13  MAMLKTIPLTLAMTFFPILFGFIIAIGLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHI 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +   F     +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 72  MLIYLGIPLLVDF-LSKSFGLGISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIG 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH ++ R VLLPQA    +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 131 QMEAAYSVGYTHGQSIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA   
Sbjct: 191 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYR 231


>gi|226224892|ref|YP_002758999.1| amino acid ABC transporter (permease) [Listeria monocytogenes
           Clip81459]
 gi|225877354|emb|CAS06068.1| Putative amino acid ABC transporter (permease) [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
          Length = 235

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 3/233 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +P  +      +     T+     +  F  + G ++++  T L R +H +  + +   Y+
Sbjct: 1   MPLDVTFIGTAVMAMLKTIPLTLAMTFFPILFGFIIAIGMT-LIRMYHVRFLEPIAKFYV 59

Query: 225 STFLIFGLPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S F        ++LI L   L  D  +   F     +   P  + + IALS    A++ E
Sbjct: 60  SFFRSTPAILHIMLIYLGIPLLVDF-LSKSFGLGISANKIPVVIFVIIALSFTAGAYLTE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+RSG+IAV  GQMEAA ++G TH +A R VLLPQA    +P  T+  +  L  +S+A  
Sbjct: 119 ILRSGIIAVDIGQMEAAYSVGYTHGQAIRKVLLPQAFMIALPNFTNLCIGFLHTTSIAAI 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           V   ++  +   + +     +E  +    IY  L+I+I      L   IA   
Sbjct: 179 VAVPEITGMATIVASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYR 231


>gi|319779070|ref|YP_004129983.1| Histidine ABC transporter, permease protein HisM [Taylorella
           equigenitalis MCE9]
 gi|317109094|gb|ADU91840.1| Histidine ABC transporter, permease protein HisM [Taylorella
           equigenitalis MCE9]
          Length = 231

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 51/229 (22%), Positives = 90/229 (39%), Gaps = 17/229 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + + S ++GI +S+    LS     KT    PL+    F   G P L
Sbjct: 11  LRDCITALPMTLFLSLVSVIIGICISIP---LSVMLQRKTI-FTPLIKAYVFFFTGSPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEF-------MSLYIALSCYTAAFIAEIVRSG 288
           V +   Y  +F  P +    FI      P F       + ++ AL   T A+  +I    
Sbjct: 67  VQL---YIFYFGIPSI---GFIQDLMQQPGFEFLKDGKIYIFAALGLNTGAYTTQIFSGS 120

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  + R ++EAA A G+  +   R V+LP ++R  +P  +++ L  +  +SLA  V   +
Sbjct: 121 IQNMDRKELEAAYAYGMDRKLTMRRVILPSSLRRALPAYSNEVLMTIHATSLASTVTINE 180

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +      +   +          IYL L+            ++ L  K
Sbjct: 181 VTNAASLFNSTFYEPFIAYTAAGIIYLCLTFSFIYLYKLFEKRVVLASK 229


>gi|288959823|ref|YP_003450163.1| hypothetical protein AZL_a00880 [Azospirillum sp. B510]
 gi|288912131|dbj|BAI73619.1| hypothetical protein AZL_a00880 [Azospirillum sp. B510]
          Length = 263

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 15/229 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  +   L    + +  +A       ++G++L +      R           + Y+  F 
Sbjct: 47  LDWSPHLLQGFAMNVLISASAIALGTLIGLILGVLELSSLRLLRLP-----AITYVQIFR 101

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
                 +++ A  Y L F      +    G     P+++   + L+   +A IAEI R  
Sbjct: 102 -NAPHLVLIFATTYALPF------EIAIGGWHVPFPDWLKAVVGLAVPASAHIAEIARGA 154

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P  Q EAA +LG    +  R ++LPQ +R  +P   + Y ++   S+LA  VG  +
Sbjct: 155 IQSIPAAQWEAAGSLGFGRLQTLRWIILPQGLRRSLPAWMNLYASIAMGSALASLVGVGE 214

Query: 349 LVSV---GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L+       T + +T   I + L  +  + +    I+    RL  + A+
Sbjct: 215 LLHAATDASTAVRRTDFTIAVYLTVLVAFFAYCYPISRLTQRLERRFAV 263



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 41/81 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF     ++ S +   T+IG ++G   LS+ +L+      YV++FRN P LV+IF  
Sbjct: 53  LLQGFAMNVLISASAIALGTLIGLILGVLELSSLRLLRLPAITYVQIFRNAPHLVLIFAT 112

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
             ++   + I    +  P  +
Sbjct: 113 TYALPFEIAIGGWHVPFPDWL 133


>gi|332161760|ref|YP_004298337.1| amino acid transport system permease protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665990|gb|ADZ42634.1| amino acid transport system permease protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 231

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 2/193 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + + F  +  + +   Y  T L+ G+P LV++ L +                G   
Sbjct: 32  LINAVIKLFGPRWLRWISTGY--TTLVRGIPELVIMLLLFFGGEMLVNGFFGLLGLGPVR 89

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F+S  +A+     A+  E  R     V RGQ+EAA+A G+  R+    ++LPQ +  
Sbjct: 90  FNTFVSGVLAIGIVFGAYYTETFRGAFQTVERGQLEAAVAYGMRPRQVFWRIMLPQMLSF 149

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            IP + + +L L+K S+L   +G  D+V +       T +      +   IY+ ++ + +
Sbjct: 150 AIPGINNNWLGLMKASALISILGLEDMVWLAEQAGRATQKPFLFYFLVAMIYMVITALSS 209

Query: 383 LFMNRLNAKIALK 395
              + L  + AL 
Sbjct: 210 WGFSLLARRYALS 222


>gi|322386192|ref|ZP_08059825.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269772|gb|EFX52699.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 230

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 7/212 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +F  VL   L       ++   E T   L   YI  F++   P +VL+ L +   + 
Sbjct: 24  LWIMFVTVLIGSLLGGLLAWAQVVEEPTFAGLARGYI--FILRCTPPIVLLFLVF---YG 78

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P   ++            + + I +    AA IAE+ ++  +AVP+GQ EA +++GLT 
Sbjct: 79  IPEFLKWWLGLDINNWSRTVFVIITMILLFAAMIAEVFKAAYLAVPKGQTEAGLSIGLTP 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIE 365
            +    ++LPQA R  +P LT+ +LNL+++++LA  +G  D++  G  +I++     ++E
Sbjct: 139 VQTFLRIILPQAFRIALPNLTTAFLNLMRDAALAYTIGAVDVMGAGQNLISRNLGNYSLE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                  IY  ++++++L    L   + +KE+
Sbjct: 199 TYTAVALIYWGIALVVSLASQLLEKSLTVKER 230


>gi|317970285|ref|ZP_07971675.1| polar amino acid ABC transporter, inner membrane subunit
           [Synechococcus sp. CB0205]
          Length = 403

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 64/294 (21%), Positives = 116/294 (39%), Gaps = 26/294 (8%)

Query: 102 SGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDH 161
             +  +     +                 +     R  P +  + +L    L    +   
Sbjct: 126 LSVAISQRWWGITALLLACRWWAGRLGPALPAAFRRGWPVIWPLLYLLGMTLIAGGLGLP 185

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                    ++        LT+   +   +  F LG++L+L      R       + L +
Sbjct: 186 V--------VSPSRWGGLLLTLIEASFAILLCFPLGVLLAL-----GRRSRLPLLRWLSV 232

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LYI    I G P + L+ L   +            + G             L+ + AA++
Sbjct: 233 LYIEF--IRGAPLITLLFLGQNILGLL--------LPGGFSPDRVWRAAWVLTFFAAAYV 282

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE VRSGL+A+P GQMEAA ALGL   +A   V+LPQA+R  +P +  Q++NLL++++L 
Sbjct: 283 AEAVRSGLVALPPGQMEAARALGLPVHQAMLKVVLPQALRVALPAMVGQFINLLQDTTLL 342

Query: 342 VAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +G  +L+     ++      G+  E+ L+   ++      + L    L  ++
Sbjct: 343 SLIGLFELLGTARAVMANPAFLGKDAEVYLVLAVLFWCCCAALGLGSRALETRL 396


>gi|304396807|ref|ZP_07378687.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304355603|gb|EFM19970.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 216

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 11/179 (6%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +         +   L+ G P +V + + +           F            ++  IA
Sbjct: 45  RRFWLWRCAGRLYISLMRGTPAIVQLFVVF-----------FTLPRLGLGGHPMLAAVIA 93

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           +   + A++AEI+R     V RGQ EAA  LGL+       V+ PQ +RS +P L S++ 
Sbjct: 94  IGFNSGAYVAEILRVNQSLVTRGQREAARTLGLSRWLTWWYVINPQVVRSSLPMLVSEFT 153

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            LLK + LA  V   +L   G  +I +T +A +++L+    YL +++ +     RL  +
Sbjct: 154 ILLKTTPLASVVALTELTYAGQIVIARTYEATQVLLLVAAGYLLIALPLMRIARRLELR 212


>gi|206560033|ref|YP_002230797.1| putative amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
 gi|198036074|emb|CAR51968.1| putative amino acid transport system, membrane protein
           [Burkholderia cenocepacia J2315]
          Length = 247

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 68/208 (32%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH------FHEKTGKALPLLYISTF 227
                  LT+   A   V + V G++L++      R        +    +  PLL    F
Sbjct: 18  WLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGRAPRTVAAAYVVAFRNTPLLVQLLF 77

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG+ +L+       L+    V      +  +  S EF++ ++ LS YTAAF+AE   +
Sbjct: 78  WYFGVASLLPDTWIAWLNARHAV--SVGPVTLAWPSFEFVAGWVGLSAYTAAFVAEECEA 135

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  QY+NL+KNSSLA+A+G A
Sbjct: 136 GLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFGQYMNLVKNSSLAMAIGVA 195

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +L      +  +T Q      +   +Y+
Sbjct: 196 ELSYASRQVETETFQTFAAFGVATVLYV 223



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 2/158 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  LA +  + AT+ G L+   R +  +    +   YV  FRN P LV 
Sbjct: 15  YLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGRAPRTVAAAYVVAFRNTPLLVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL--SL 202
           + F Y  V S+LP    + +                        + + ++    V     
Sbjct: 75  LLFWYFGVASLLPDTWIAWLNARHAVSVGPVTLAWPSFEFVAGWVGLSAYTAAFVAEECE 134

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              R  R        AL L  + +     LP  V IAL
Sbjct: 135 AGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 172


>gi|46578803|ref|YP_009611.1| His/Glu/Gln/Arg/opine ABC transporter permease [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120603590|ref|YP_967990.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris DP4]
 gi|46448215|gb|AAS94870.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio vulgaris str. Hildenborough]
 gi|120563819|gb|ABM29563.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Desulfovibrio vulgaris DP4]
 gi|311232666|gb|ADP85520.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris RCH1]
          Length = 225

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 101/230 (43%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + +    L +            + S  LG  + +    +++ +  +  + L  LY+
Sbjct: 1   MLDKLLVIWDALPYILEGSAVTIATVLGSLALGFCMGV-PMAVAQVYGGRPVRYLVGLYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F                +     +     F         F +  + L   +AA+ ++I
Sbjct: 60  WFFR------------GMPILVLLFLFYFGLFQALDLNLSAFTASCLVLGMASAAYQSQI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++A+P+GQ++AA ALG++   A R ++LPQA+R  IP  +++Y  LLK+S+LA  +
Sbjct: 108 FRGSILALPQGQLKAARALGMSDGAAIRSIVLPQALRLSIPAWSNEYSILLKDSALAFVL 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  ++++    + ++T + + + +    +Y  +++     +  L  K  +
Sbjct: 168 GTPEIMARTHFVASRTYEHLPLYMTAGALYFIITLAGLKVLRHLERKTRI 217


>gi|33240125|ref|NP_875067.1| ABC-type amino acid transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
 gi|33237652|gb|AAP99719.1| ABC-type amino acid transport system permease component
           [Prochlorococcus marinus subsp. marinus str. CCMP1375]
          Length = 299

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 16/257 (6%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
             +     + P              ++       +    + K+   S  +   +  F   
Sbjct: 37  LGFNYSWLLRPASFALAEHSLPFSPSDSYAWALFIGWLNSLKVIFASLFIATFIGFFVG- 95

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-------------DKPVLGQ 253
           ++R         +   YI+  +I   P L+ +   Y + F                +  Q
Sbjct: 96  IARIGTNILLNLISTGYIT--IIRQTPLLLQLMFWYFVGFLGLKDKAIAPLRGILSISNQ 153

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
              + G  +S EF +L + LS +T A+IAE+VR G+ +VPRGQ EA  +LGL+       
Sbjct: 154 GINLLGINLSAEFSALLLGLSVFTGAYIAEVVRGGINSVPRGQWEAFKSLGLSDIHGLYK 213

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +++PQA+ +IIP LTSQYLNL KNS+LA+A+G+AD+ +V  TIINQTG+AIE  ++ +  
Sbjct: 214 IIIPQALPAIIPGLTSQYLNLAKNSTLAIAIGYADIYAVNDTIINQTGRAIECFILLLLS 273

Query: 374 YLSLSIMIALFMNRLNA 390
           +L L+I+I+  M  +N 
Sbjct: 274 FLFLNIIISSLMEMVNK 290



 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 63/125 (50%)

Query: 29  VQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATA 88
           +QI L LL+  +    +NN+  N+  + L     +L   A F + +  +P++   SYA A
Sbjct: 9   LQIGLLLLVIGLLSILINNIIVNLYNTGLGFNYSWLLRPASFALAEHSLPFSPSDSYAWA 68

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + +G++N+  + F+ +  AT IG  VG  R+  N L+  I   Y+ + R  P L+ + F 
Sbjct: 69  LFIGWLNSLKVIFASLFIATFIGFFVGIARIGTNILLNLISTGYITIIRQTPLLLQLMFW 128

Query: 149 YKSVL 153
           Y    
Sbjct: 129 YFVGF 133


>gi|73661927|ref|YP_300708.1| ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494442|dbj|BAE17763.1| ABC-type amino acid transport system permease component
           [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
          Length = 232

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 88/186 (47%), Gaps = 4/186 (2%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVS 263
            + R           ++Y S F     P +V + + Y     F   +     +     + 
Sbjct: 37  AMIRLKRIPVLSQFIIIYNSFF--RSTPLIVQLFIVYYGLPAFILFLNEHLQWHINPDIF 94

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
              +  +I  S +  A+++E ++SGL +V   Q+EAA ++GLT     + ++LPQA    
Sbjct: 95  SPLIIAFIVFSLHAVAYLSESIKSGLQSVDYEQIEAAQSVGLTRFHIYKEIVLPQAFAYA 154

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P + +Q++ L+K +SLA AV   ++++V   I N+  + I +  +    Y  L++++  
Sbjct: 155 LPNIENQFIMLIKGTSLAFAVQVTEIMAVSHIIANEGYRFITVYTVAAMFYWLLAMILEY 214

Query: 384 FMNRLN 389
             N++ 
Sbjct: 215 IFNKME 220


>gi|298293524|ref|YP_003695463.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930035|gb|ADH90844.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 223

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 12/227 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTF 227
           M  N   L+     +     + +  +V G VL L    +       T + +   L     
Sbjct: 1   MTFNPAILTDNWREILDGMLLTILIWVAGTVLGLVIGLVVAIVQLFTNRWVAAPLTFYVA 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L+ G P L+ + + Y                G  ++P  ++    L+ Y  A+ +EI R+
Sbjct: 61  LMRGTPFLIQLFVIYYGG----------PFFGLDLTP-LVAGMAGLALYGGAYFSEIFRA 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G ++VP GQ+EAA  +G++     R V LPQ +  I+P L +  + L K +++   +   
Sbjct: 110 GFLSVPVGQIEAARIMGISRLSIVRHVQLPQMLVIILPALANMTVLLSKETAVLSVITVN 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L SV  +I + T    E +L    +Y +   ++     RL  ++  
Sbjct: 170 ELTSVIQSIGSTTFAFAETLLFLALVYWAFLEIVTAAARRLEKRVGR 216



 Score = 37.6 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              IL G + T  +  +G +   +IG +V   +L  N+ VA     YV + R  P L+ +
Sbjct: 12  WREILDGMLLTILIWVAGTVLGLVIGLVVAIVQLFTNRWVAAPLTFYVALMRGTPFLIQL 71

Query: 146 FFLYKSVL 153
           F +Y    
Sbjct: 72  FVIYYGGP 79


>gi|190894164|ref|YP_001984458.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190699825|gb|ACE93908.1| nopaline ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 240

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 7/208 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F  S   G +L L    L R+   K+  +    Y  T +I G+P L++I L Y    
Sbjct: 35  LLVFALSCAFGTLLGLLIAVL-RNSTRKSVSSCMRAY--TGIIRGVPELLIILLTYFGGT 91

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                      GG      F +   AL+   + + AEI R  + AV  GQ EAA ALGL+
Sbjct: 92  AL----LSAIAGGYIEINAFAAGVAALTVVFSGYAAEIFRGAINAVAPGQREAAAALGLS 147

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +   L+++PQ +   +P   +  ++L+K++SL   VG  D++ V           +  
Sbjct: 148 NSQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLISVVGLTDVMRVAYIGAGSLRAPLPF 207

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            L    IYL+L+ +  L    L  + +L
Sbjct: 208 YLAASAIYLALTSLSLLSFRLLERRYSL 235



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G  NT  +        T++G L+   R S  K V+   R Y  + R +P L++I   
Sbjct: 27  FLSGLKNTLLVFALSCAFGTLLGLLIAVLRNSTRKSVSSCMRAYTGIIRGVPELLIILLT 86

Query: 149 YKSVL 153
           Y    
Sbjct: 87  YFGGT 91


>gi|320095185|ref|ZP_08026891.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977890|gb|EFW09527.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 292

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 102/238 (42%), Gaps = 10/238 (4%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
             +    F        L      +  N +I V + VLG+ +       +R          
Sbjct: 60  PRTQETFFSGRHFAASLPQVAAGLWLNVRILVIA-VLGVAVLATVLAAARTLGGPV--FF 116

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           P+ +++         +  + + Y + F  P L   + I      P  +   IAL    ++
Sbjct: 117 PIRFLAAAYTDIFRGIPFLVVLYLVGFGIPALNPNDRI------PTAVLGTIALVLTYSS 170

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++AE++R+GL ++   Q  AA +LGLTH +  R++++PQA+R + P L + ++++ K+  
Sbjct: 171 YVAEVLRAGLESIHPSQRYAARSLGLTHGQTLRMIIVPQAIRKVTPALMNDFISMQKDVG 230

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L   +G  D +        +T   +   ++   +++ +S       +   AK+  +E+
Sbjct: 231 LISVLGAVDAIRAAQQYQAKTYN-MTSYVVAGVLFILMSFPFIRLSDWYTAKLRKREQ 287


>gi|222148523|ref|YP_002549480.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221735509|gb|ACM36472.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 267

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 2/208 (0%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                 +   +   G+++  F   L+    E+  +    +Y + F       L L  + Y
Sbjct: 53  FKVTVTLAAATLPFGLLIG-FLMALATQSSERMLRQAAAIYTTIFRGL-PELLTLFIVYY 110

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                   +              F +  IAL+   +++ AE+++S   A+P GQ EA  A
Sbjct: 111 GSQILIQAVLASMGFEERIEINAFFAGMIALALVFSSYCAEVLQSAFRAIPSGQYEAGFA 170

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GL+  K   LV++PQ +R  +P + + ++NLLK+++L   +G +D++   G     T +
Sbjct: 171 IGLSRTKTMLLVIVPQLIRIALPGIVNLWMNLLKDTALVSVIGLSDIIRQTGIAARVTKE 230

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNA 390
           A     I   +YL L+I+ ++ +  +  
Sbjct: 231 AFLFYTIACALYLVLAILSSIAVGYIEN 258



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 8/167 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  GF  T  LA + +    +IG L+     S+ +++     +Y  +FR +P L+ 
Sbjct: 45  WGDEIGFGFKVTVTLAAATLPFGLLIGFLMALATQSSERMLRQAAAIYTTIFRGLPELLT 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y     ++     S+     + +N              A   VFS     VL   A
Sbjct: 105 LFIVYYGSQILIQAVLASMGFEERIEIN-------AFFAGMIALALVFSSYCAEVLQ-SA 156

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            R       + G A+ L    T L+  +P L+ IAL   ++    +L
Sbjct: 157 FRAIPSGQYEAGFAIGLSRTKTMLLVIVPQLIRIALPGIVNLWMNLL 203


>gi|26991431|ref|NP_746856.1| amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|24986504|gb|AAN70320.1|AE016673_5 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
          Length = 213

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + V +F +G+VL      L R    K    L  + + T         
Sbjct: 5   LMMLLNGIPWTIAVTVLAFCVGVVLGFPICAL-RMSRVKVLSILAAMLVLTLRSIPPIVW 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +                     GG      F +  + L   TAA ++E+ R    A+P G
Sbjct: 64  LFFIFF-------------GIGGGYISLSPFTAAVVGLGLITAAHMSEVYRGAFAAIPAG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L+  +    V+LPQ +R  IP   +  + LLK+S++A  +G  ++      
Sbjct: 111 QFEAAYVLNLSAPQRFFDVVLPQLVRIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQ 170

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  QT Q + +      +YL LS+ +ALF   L+A +  +  +
Sbjct: 171 VSQQTFQGLSVYTAAAVVYLVLSVPVALFSRWLSATLKQRIAR 213



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               +L G   T  +         ++G  + A R+S  K+++ +  + V   R+IPP+V 
Sbjct: 4   ILMMLLNGIPWTIAVTVLAFCVGVVLGFPICALRMSRVKVLSILAAMLVLTLRSIPPIVW 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +FF++  +               G+
Sbjct: 64  LFFIFFGIGGGYISLSPFTAAVVGL 88


>gi|289676778|ref|ZP_06497668.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 206

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 86/199 (43%), Gaps = 4/199 (2%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S V+G  +S+    ++R   ++  +     Y  T+L  G P  + + + Y   +    + 
Sbjct: 3   SIVIGFCVSIPL-SIARVSGKRWVRWPVQFY--TYLFRGTPLYIQLLICYTGIYSLAAVR 59

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +   +  +          +A +  T A+  EI    + ++  G++EAA A GLT  K   
Sbjct: 60  EQPML-DAFFRDAMNCTILAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLTGWKLYA 118

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V++P  +R  +P  +++ + +L ++++A      D++ V     + T    +   I   
Sbjct: 119 YVIMPSVLRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAV 178

Query: 373 IYLSLSIMIALFMNRLNAK 391
           +YL+++ ++         +
Sbjct: 179 MYLTVTFILVGLFRLAERR 197


>gi|51245288|ref|YP_065172.1| amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
 gi|50876325|emb|CAG36165.1| probable amino acid ABC transporter, permease protein [Desulfotalea
           psychrophila LSv54]
          Length = 473

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 69/312 (22%), Positives = 125/312 (40%), Gaps = 21/312 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ILVG   +  +    +  +  +  + G G   A  L A +    +   + +   V  + L
Sbjct: 180 ILVGLAASILV---CLAVSLSVRAIWGDGGAWALGLSAALLVYPLFALKQLSETVWRWNL 236

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
              V  ++            + +         LT+         +  +GI+L+L      
Sbjct: 237 LCVVYPLIAYFLFVGDAFGLVLVETHFWGGLFLTLVVAGTGMATAMPIGILLAL-----G 291

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + L + +I       L + VL           P    F+         + + 
Sbjct: 292 RCSKMIVIRTLCIGFIELVRGVPLIS-VLFMASVMFPLFLPENMSFD---------KLLR 341

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I ++ + AA+IAE++R GL A+P+GQ EAA ALG T+ K   +++LPQ +R +IP L 
Sbjct: 342 ALIGVAFFYAAYIAEVIRGGLQAIPKGQYEAAEALGWTYWKKMSVIILPQTLRMVIPGLA 401

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFM 385
           + +L+LLK+++L   +G  DL+ V    +      G   E  +    ++      I+ + 
Sbjct: 402 NNFLSLLKDTTLVAVIGLLDLLGVAKAALADAAWLGFTKEAYVFAGLVFWIFCFAISRYS 461

Query: 386 NRLNAKIALKEK 397
           N L  K     +
Sbjct: 462 NFLEKKYHTNYR 473


>gi|85057595|ref|YP_456511.1| ABC-type amino acid ABC transporter, permease component [Aster
           yellows witches'-broom phytoplasma AYWB]
 gi|84789700|gb|ABC65432.1| ABC-type amino acid ABC transporter, permease component [Aster
           yellows witches'-broom phytoplasma AYWB]
          Length = 629

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 84/222 (37%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                + +      + T   + + S ++G +L++  T +     +     L ++ I   +
Sbjct: 401 FIQAQKTIPSYLEGLKTTLILAIDSLIIGFLLAIVCTLIKNIKLDSHKNNLLMVAIIKMI 460

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              + TL  +     +     ++           S    +    L   + A I  I+   
Sbjct: 461 NTSINTLFFVLKGIPVAAQAMLIYYSITFLFKGSSNPLHAGIFVLMLNSLASITMILMQN 520

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  + +GQ+EA+ +LG+  ++    ++ PQ ++  +P +  Q +  +K+SS    +G  +
Sbjct: 521 IKFLDKGQIEASHSLGMNQKQVFFFIVFPQTLKRSVPFIFQQLITNIKDSSFFAIIGITE 580

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           L     + +  T   I   ++  F YL +  M       L  
Sbjct: 581 LSWQAQSNMGSTFNPILPFVMISFFYLIIISMTGFLSKILEK 622


>gi|317487125|ref|ZP_07945928.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316921609|gb|EFV42892.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 339

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 19/219 (8%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
              T++      + +F LG+ L+L      R F  K       +Y+  F       LV +
Sbjct: 138 FMTTLEVGIIATLCAFWLGVFLTLV-----RFFENKVMTGFVKVYVDVFRALPTIVLVSL 192

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                +H+  P +G +         P  +S  + L+   +AF +EI+RSG+ AV  GQ+E
Sbjct: 193 -----IHYGAPFIGIY--------LPLMVSGILTLTLNHSAFFSEILRSGVSAVGHGQLE 239

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LGL   K  RL++ PQA ++ +PPLT Q++ LLK + +   VG  +L+     + +
Sbjct: 240 AARSLGLGTFKTFRLIVFPQAFKTAMPPLTGQFVALLKETVICSVVGIPELLREALVVQS 299

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            T      ++I    YL L + +      L  +++   +
Sbjct: 300 WTANPTP-LIIATIGYLLLLVPLTRLSRYLEVRMSTVRQ 337



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 10/183 (5%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+  GF+ T  +     + A  +G  +   R   NK++    +VYV+VFR +P +V++
Sbjct: 131 MKALAGGFMTTLEVGIIATLCAFWLGVFLTLVRFFENKVMTGFVKVYVDVFRALPTIVLV 190

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVLGIV- 199
             ++     +       +     + LN+       L    +A          S  LG   
Sbjct: 191 SLIHYGAPFIGIYLPLMVSGILTLTLNHSAFFSEILRSGVSAVGHGQLEAARSLGLGTFK 250

Query: 200 ---LSLFATRLSRHFHEKTGKALPLLYISTFL-IFGLPTLVLIALKYQLHFDKPVLGQFN 255
              L +F           TG+ + LL  +    + G+P L+  AL  Q     P      
Sbjct: 251 TFRLIVFPQAFKTAMPPLTGQFVALLKETVICSVVGIPELLREALVVQSWTANPTPLIIA 310

Query: 256 FIG 258
            IG
Sbjct: 311 TIG 313


>gi|227820777|ref|YP_002824747.1| putative amino acid ABC transporter, inner membrane component
           [Sinorhizobium fredii NGR234]
 gi|227339776|gb|ACP23994.1| putative amino acid ABC transporter, inner membrane component
           [Sinorhizobium fredii NGR234]
          Length = 241

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 2/180 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL   T ++  +P LVLI L Y    D           G+      M+    +     A+
Sbjct: 62  LLECYTTIVRAVPELVLILLLYYAGTDLLNQFLGAMGIGTVDISGLMAGIFVIGVVQGAY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E++R  + AVP GQ+EAA A G++  K  R + LP  +   IP L + +L   K+++L
Sbjct: 122 STEVLRGAIKAVPAGQIEAARAYGMSPTKVLRRITLPAMLPYAIPGLANLWLIATKDTAL 181

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK--EKK 398
              VGF++L  V       T            +YL L+++  LF+  +         E++
Sbjct: 182 LAVVGFSELTLVTRQAAGTTKAYFLFFCAAGALYLVLTLVSNLFIGVIERHARRGFAERR 241


>gi|224437620|ref|ZP_03658573.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter cinaedi CCUG 18818]
 gi|313144071|ref|ZP_07806264.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129102|gb|EFR46719.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 219

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N     F    +     + V + V+ I+L  F   ++R++  +  + L  +YI TF   
Sbjct: 5   FNETNFHFLLDGLYLTLMVAVATCVISIILGTFL-AITRNYGGRIARTLAAIYIETFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L   +L A+             F        +   +   I  S YT++ +AEI+R GL 
Sbjct: 64  PLLLWMLTAV-------------FVLPSFFGRADPAVWGTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G +       ++LPQ  R +IP L SQ +   K++S    +  A+L 
Sbjct: 111 SIPKGQFEAAYSQGFSQFFTLFYIILPQTFRKVIPSLLSQIITTFKDTSFLAGLQIAELT 170

Query: 351 SVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIA 393
                I+ Q     EI+L   +   IY  +   +++ +  L+ K A
Sbjct: 171 YQSKIILAQLTSFEEILLMIGVVASIYFVVCFSLSVLVRYLDKKTA 216



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 66/199 (33%), Gaps = 5/199 (2%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + +    +L G   T  +A +  + + I+GT +   R    ++   +  +Y+E FRN P 
Sbjct: 6   NETNFHFLLDGLYLTLMVAVATCVISIILGTFLAITRNYGGRIARTLAAIYIETFRNTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVL 196
           L+ +      + S     D ++    G  L    +    +    N+         +S   
Sbjct: 66  LLWMLTAVFVLPSFFGRADPAVWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGF 125

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
               +LF   L + F +     L  +  +      L  L +  L YQ       L  F  
Sbjct: 126 SQFFTLFYIILPQTFRKVIPSLLSQIITTFKDTSFLAGLQIAELTYQSKIILAQLTSFEE 185

Query: 257 IGGSTVSPEFMSLYIALSC 275
           I         +   +  S 
Sbjct: 186 ILLMIGVVASIYFVVCFSL 204


>gi|170742606|ref|YP_001771261.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168196880|gb|ACA18827.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 232

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 68/170 (40%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T L      LV+  L +        +       G    P F     AL   + A+ AE+ 
Sbjct: 61  TILRGVPDLLVIYLLYFGGSAALGSVAGLFGATGFVGLPPFAVGVGALGIISGAYQAEVF 120

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R   +A+ RG +EAA A+G++     R V+ P   R+ +P L + +  LLK+S+L    G
Sbjct: 121 RGAYLALDRGLIEAARAVGMSPALLFRRVVAPLVARTALPGLGNVWQILLKDSALVSVTG 180

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +L+         T Q     L    +YL ++ + +    R  A     
Sbjct: 181 LVELLRQAQVGAGSTRQPFTFYLAAGALYLLITSLSSWGFARAEAHARRG 230


>gi|49081924|gb|AAT50362.1| PA2202 [synthetic construct]
          Length = 226

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   VLG+ L++             GK   LL         +P L    L +  +F  P+
Sbjct: 42  VLGLVLGVALAVL-----------PGKPRLLLVALLGFFRAIPVL---MLIFWTYFLLPI 87

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +   +        P   ++  ALS    A++A  V +G+ ++P GQ  AA ALGL   + 
Sbjct: 88  VFHVDV-------PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQV 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            RLV+LPQA+  ++P   +Q+++L+K++SLA  +G  +L  V   + N+      EI L 
Sbjct: 141 LRLVILPQALPVMLPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLF 200

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
              +Y  L   + L    L  +
Sbjct: 201 VALLYFLLCTSLDLAAAFLARR 222


>gi|39935696|ref|NP_947972.1| polar amino acid ABC transport system protein AapM-2
           [Rhodopseudomonas palustris CGA009]
 gi|39649549|emb|CAE28071.1| polar amino acid ABC transport system protein, aapM-2
           [Rhodopseudomonas palustris CGA009]
          Length = 360

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P L     +    + +         LP G  +++       +T+      F  S  + +
Sbjct: 113 MPRLWGARLVVAWPVVIGLCLALMSGLPGGAVVSSNQWGGLPITLLVWVICFATSVPIAV 172

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +LSL     +R    +  + L + YI       +  + ++A+ Y      P+      + 
Sbjct: 173 LLSL-----ARRSRMRIVRWLAIGYIEL-----MRAIPMVAILYFATLILPM-----ALP 217

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS    +     + L+ +  A++AE+VR GL AVPRGQ EAA+ALGL + ++ RL++LPQ
Sbjct: 218 GSVPLDKLPRAIVMLALFWTAYVAEVVRGGLQAVPRGQEEAALALGLGYWRSMRLIVLPQ 277

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYL 375
           A+R+++P L +  +  L  +SL   +G  D++             G   E  L+   +Y 
Sbjct: 278 ALRAVVPGLVNLGIGFLLATSLLAVIGIMDILGAAKAAAADPEWLGYYKEAFLVVALVYF 337

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +    + +   L  ++     +
Sbjct: 338 VMCYSGSRYSLWLERRLGTFNGR 360


>gi|312866273|ref|ZP_07726492.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098246|gb|EFQ56471.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 263

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 8/219 (3%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTF 227
                 +         K F  +F + +V +L  + L+        + +P+L     + T 
Sbjct: 1   MFSDFHYLLDLFPQILKAFPITFFIVLVSTLAGSLLALLLAVVRLEKVPILNQLTLVYTS 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I G P +V + + Y   +  P L     I  + V  +   +YIA S    A+  EI+RS
Sbjct: 61  FIQGTPVIVQLFIVY---YGVPYLLGLLGIDIAGV-SKLTFMYIAYSLNAGAYFGEIIRS 116

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +  VPR Q +AA ++G+   +  R  +LPQA++ +IP +    ++LL+NSSLA  +G  
Sbjct: 117 AIANVPRHQFDAAYSIGMDKVQTYRYYILPQAVKEMIPNIELSIVSLLQNSSLATYLGIY 176

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           D++     +   T   IE  +    I++ LS++I L   
Sbjct: 177 DIMGKAQLVGTNTAHQIEAFIDASIIFIVLSVVIHLAFK 215


>gi|241766695|ref|ZP_04764536.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241362978|gb|EER58663.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 216

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 14/217 (6%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F          L +     + + +F  G +L +    L         + +        + 
Sbjct: 4   FTFWDIAKQLLLALRWTVGLSLIAFAGGSLLGMALLVLRLARLPGAQRFVAAYVQ---VF 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P L+ + L Y           F        +   ++  + L  Y++A++ EI R  +
Sbjct: 61  QGTPLLMQLFLTY-----------FGLAMVGVDTSPLLAASVCLILYSSAYLCEIWRGCV 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVPRGQ EA+ +L +   +  R V+LPQA+R  I P     + ++K ++L   +GF ++
Sbjct: 110 EAVPRGQWEASASLAMGFTEQLRHVILPQALRMGIAPTAGFSVQIIKGTALTSVIGFIEI 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
              G  I N T +   I      +Y +L   ++L+  
Sbjct: 170 TKAGQLIANATFEPFLIYGCVAALYFALCFPLSLWSQ 206


>gi|226196429|ref|ZP_03792011.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|225931646|gb|EEH27651.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
          Length = 247

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 63  VVVISFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 116 HAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 175

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 176 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 212


>gi|320546925|ref|ZP_08041227.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448443|gb|EFW89184.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 226

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 3/208 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + S ++    +LF   L R    K      ++Y++         L+L      
Sbjct: 18  PVTLGIMIVSILISFFPALFL-ALGRIHKVKGVTGFSVVYLAFIRSTPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 VL    F     ++P + +  I     T   ++EI+RS L+ V +GQ+EAA+A+
Sbjct: 77  PSLINQVLKASGF-NVFDINPIYYAFVI-FGLMTTGSLSEIIRSSLLTVNKGQLEAALAI 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT ++A   ++ PQA++  +P L +  +NL+K +SL   +   D+ ++           
Sbjct: 135 GLTKKQAYLRIIFPQAIKQALPNLCNLVINLVKGTSLVFVMTVKDITAIAKVEAAYGYHY 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E   +   IY+ +  +I      L  +
Sbjct: 195 FESYFVIFVIYIVICGLIQYAFKVLEKR 222



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 61/203 (30%), Gaps = 12/203 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ +      +  GR+   K V     VY+   R+ PP+++I F Y
Sbjct: 14  LAGIPVTLGIMIVSILISFFPALFLALGRIHKVKGVTGFSVVYLAFIRSTPPILLILFFY 73

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF------------SFVLG 197
               S++     +                    M T +   +                L 
Sbjct: 74  SLFPSLINQVLKASGFNVFDINPIYYAFVIFGLMTTGSLSEIIRSSLLTVNKGQLEAALA 133

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I L+     L   F +   +ALP L      +    +LV +     +     V   + + 
Sbjct: 134 IGLTKKQAYLRIIFPQAIKQALPNLCNLVINLVKGTSLVFVMTVKDITAIAKVEAAYGYH 193

Query: 258 GGSTVSPEFMSLYIALSCYTAAF 280
              +    F+   +       AF
Sbjct: 194 YFESYFVIFVIYIVICGLIQYAF 216


>gi|157145939|ref|YP_001453258.1| hypothetical protein CKO_01692 [Citrobacter koseri ATCC BAA-895]
 gi|157083144|gb|ABV12822.1| hypothetical protein CKO_01692 [Citrobacter koseri ATCC BAA-895]
          Length = 259

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 101/238 (42%), Gaps = 23/238 (9%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH----------FHEKTGKALPLL 222
              L +  +      +  +  F+  + ++L    LS                 G+ L   
Sbjct: 1   MLTLDWQGVLSGQPLQWVISGFLTTLWVTLAGVLLSTLLAIILLALRLSGNAFGRRLVAA 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-----------PEFMSLYI 271
           ++S F     P LV +   Y   ++       +F+                 PEF+    
Sbjct: 61  WVSLF--RNTPLLVQLMFWYFAAWNFLPRDVIDFVNTDHFWSILPGDVWWLTPEFLCSAW 118

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  +T+AF+ E + SGL AV  GQ EAA++ G +     R +LLPQ + +   P+  QY
Sbjct: 119 GLGVFTSAFLVEEIASGLQAVSAGQREAAVSQGFSAWTTLRHILLPQGLANAWQPIVGQY 178

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           LNL+K SSLA  +GFA+L      I +    A+E   +   +YL   I++ L + RLN
Sbjct: 179 LNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLLTGIVLGLLLTRLN 236



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 49/115 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ GF+ T W+  +G++ +T++  ++ A RLS N     +   +V +FRN P LV +
Sbjct: 15  LQWVISGFLTTLWVTLAGVLLSTLLAIILLALRLSGNAFGRRLVAAWVSLFRNTPLLVQL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            F Y +  + LP      V     +    G  +        +   +  F    ++
Sbjct: 75  MFWYFAAWNFLPRDVIDFVNTDHFWSILPGDVWWLTPEFLCSAWGLGVFTSAFLV 129


>gi|21492783|ref|NP_659858.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|21467208|gb|AAM54871.1| nopaline ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 231

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 7/233 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                +        +      +     +F  S   G +L L    L R+   K+  +   
Sbjct: 1   MRSQEYWRLALYAFVDQFLSGLKNTLLVFALSCAFGTLLGLLIAVL-RNSTRKSVSSCMR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T +I G+P L++I L Y               GG      F +   AL+   + + 
Sbjct: 60  AY--TGIIRGVPELLIILLTYFGGTAL----LSAIAGGYIEINAFAAGVAALTVVFSGYA 113

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI R  + AV  GQ EAA ALGL++ +   L+++PQ +   +P   +  ++L+K++SL 
Sbjct: 114 AEIFRGAINAVAPGQREAAAALGLSNAQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLI 173

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             VG  D++ V           +   L    IYL+L+ +  L    L  + +L
Sbjct: 174 SVVGLTDVMRVAYIGAGSLRAPLPFYLAASAIYLALTSLSLLSFRLLERRYSL 226



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G  NT  +        T++G L+   R S  K V+   R Y  + R +P L++I   
Sbjct: 18  FLSGLKNTLLVFALSCAFGTLLGLLIAVLRNSTRKSVSSCMRAYTGIIRGVPELLIILLT 77

Query: 149 YKSVL 153
           Y    
Sbjct: 78  YFGGT 82


>gi|319408409|emb|CBI82064.1| ABC transporter, permease protein [Bartonella schoenbuchensis R1]
          Length = 237

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 3/180 (1%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            + K  K +  L+ S F   GLP L+ + L Y  L      +  + +I  +     F + 
Sbjct: 50  SNIKIFKVIATLFSSVF--RGLPELLTLFLVYHGLQNLIQAIFNYFYIETTFSINAFTAG 107

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +ALS   AAF  E+         +GQ EAA ALG +       ++ PQ  R+ +P L++
Sbjct: 108 VLALSMVFAAFSCEVWLGAFKIFDKGQYEAAKALGFSCFTTFFRIVFPQLTRNALPGLSN 167

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            +L LLK++SL   +   DL+      +  T + +    +   +YL  S + +  +  L 
Sbjct: 168 TWLTLLKDTSLVSTISLVDLMRQTNLAVAATNKPMFFYFVACLLYLLFSAVSSTILRYLE 227


>gi|167836529|ref|ZP_02463412.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis MSMB43]
          Length = 217

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 14/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + V SF +G VL++    ++     K      + +    +I  +P +V + + + 
Sbjct: 17  PWTLILTVSSFAIGAVLAIPVCAIA---SAKNSVVKAVSHSIILVIRSVPPIVWLFIIF- 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F    G        S    L   TA  + EI R  + AV  GQ EAA  L
Sbjct: 73  ----------FGIGNGILPLSPVTSAIAGLGLITAVNLGEIYRGAMKAVSSGQFEAAKVL 122

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +    VL+PQ  R  +P   +  + LLK++++A  +G  ++      +  QT + 
Sbjct: 123 GLSGIRQYTDVLVPQIFRVALPSAATYAIGLLKDTAVASTIGVPEMAQAAYRVSQQTFKG 182

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +E+ +I   +Y  +S+++A     L+ ++  +  +
Sbjct: 183 LEVYVISGLLYFGISLVMAYISRNLDKRLRQRIAR 217


>gi|254250639|ref|ZP_04943958.1| transport system membrane protein [Burkholderia cenocepacia PC184]
 gi|124879773|gb|EAY67129.1| transport system membrane protein [Burkholderia cenocepacia PC184]
          Length = 220

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 11/178 (6%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
               + +   L  G P LV + L Y                G T  P   +  + L+ Y 
Sbjct: 52  VRAAIRVYVELFRGTPFLVQLFLLYYGGPAF----------GLTFDP-LTAGVVGLALYA 100

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+  E  RSG  AVP+G +EAA  LGL+  + T  V LPQ M  I+P LT+  + L K 
Sbjct: 101 GAYFTEAFRSGFSAVPQGHVEAASCLGLSRWQTTFRVQLPQMMVLILPALTNLAIVLSKE 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++   V   +L  V   I + +   +E +L     YL L  M       +  ++A +
Sbjct: 161 TAVLSIVTVPELTFVLTGIGSASFAFVETLLALSVCYLLLVEMATWAGTAVERRVARR 218


>gi|311107900|ref|YP_003980753.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 15 [Achromobacter
           xylosoxidans A8]
 gi|310762589|gb|ADP18038.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 15
           [Achromobacter xylosoxidans A8]
          Length = 230

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 11/223 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE--KTGKALPLLY 223
               F N R +S  T    T     + +    +VLS+ A       H   +     P+  
Sbjct: 3   WLLDFYNWRIVSQYTGQFATGLANTLIAAGASLVLSVLAGIPLALAHMSPRALVWRPVAA 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              F I   P LV I L Y   +  P+L     + G+    E +   +A++ + AA+++E
Sbjct: 63  YVQF-IRSTPLLVQIYLVY---YAVPML-----VPGAKGWSEMLLGIMAMTLHHAAYMSE 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R G+ +VPRGQ+E A A G+ + +  R V+LPQA  + +PPL  Q   L+K++SL   
Sbjct: 114 IIRVGIESVPRGQIEGAKACGMNYGQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSL 173

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           +   +LV+ G  + +      E  L     YL +   + L   
Sbjct: 174 ITVFELVAAGVQMNSDRIVPNESFLTIAAGYLLIYACMLLLSR 216



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 37/93 (39%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y      G  NT   A + ++ + + G  +    +S   LV      YV+  R+ P L
Sbjct: 14  SQYTGQFATGLANTLIAAGASLVLSVLAGIPLALAHMSPRALVWRPVAAYVQFIRSTPLL 73

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           V I+ +Y +V  ++P       +  G+      
Sbjct: 74  VQIYLVYYAVPMLVPGAKGWSEMLLGIMAMTLH 106


>gi|227529348|ref|ZP_03959397.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350776|gb|EEJ41067.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 225

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 23/243 (9%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
                        P         LS   L++   A  FV S V+GI++ L      R   
Sbjct: 3   WEHFFNIPGFFDAPLAWQSLPTILSGLPLSIILLAICFVTSNVVGILIMLM-----RISK 57

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +    +   YIS F   G+P LV++ L Y                         +  ++
Sbjct: 58  YRFLSGIARFYISFF--RGVPMLVVLFLTYF----------------GLNMAALPAAVLS 99

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            +   +AF+AE  RS L  V + Q ++A ALG+++R     ++LPQA R ++P L +  L
Sbjct: 100 FTVVPSAFLAEYYRSALKGVSQTQYDSAKALGMSYRIMMTYIILPQAFRIVLPSLGNVLL 159

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++ K++SLA  +  +++      +       + I +    IY  +  +++    R+   +
Sbjct: 160 DMFKSTSLAAMITVSEMFMKAKVVAGVNQDYMTIYIEIAIIYWIVCCVLSWGEQRVENHL 219

Query: 393 ALK 395
            L 
Sbjct: 220 QLY 222



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   +  L     + + ++G L+   R+S  + ++ I R Y+  FR +P LVV+F  
Sbjct: 25  ILSGLPLSIILLAICFVTSNVVGILIMLMRISKYRFLSGIARFYISFFRGVPMLVVLFLT 84

Query: 149 YKSV 152
           Y  +
Sbjct: 85  YFGL 88


>gi|218463668|ref|ZP_03503759.1| octopine ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 150

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 69/141 (48%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +G      G    P F++  +AL   +AA+ AE+ R    +V RG++EAA A+G+     
Sbjct: 1   MGGLFGYQGFIGMPAFLTGTLALGVVSAAYQAEVFRGAYRSVARGEIEAASAVGMRRWPK 60

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R ++ P  +R  IP L + +  +LK S+L    G  +L+         T +  E  L+ 
Sbjct: 61  FRRIVAPLVLRYAIPGLGNTWQLVLKESALVSVTGLVELLRQSQIAAGSTRRPFEFYLMA 120

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
           + +YL ++   ++   R+ A+
Sbjct: 121 VVLYLVITWFSSILFRRMEAR 141


>gi|163742836|ref|ZP_02150220.1| amino acid ABC transporter, permease protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383800|gb|EDQ08185.1| amino acid ABC transporter, permease protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 446

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 18/256 (7%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N P  +  + L  +V+ +  I          + +         LT          S  +G
Sbjct: 196 NKPDRLHKYALATAVVVIFAIVYAFFGSWEPVQVKTNLWGGLFLTFVIAGIGITVSLPMG 255

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           I+L+L     +R       K L + +I       L T++ +A          V     F+
Sbjct: 256 ILLAL-----ARRSELPAVKVLAVSFIELVRSVPLITVLFMA----------VTMVPLFL 300

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + +   + +  + +A++AE VR GL  V  GQ EAA +LGL + K   LV+LP
Sbjct: 301 PQGVELNKLVQAIVGVCLFFSAYMAETVRGGLQVVAVGQTEAAKSLGLGYWKTMYLVVLP 360

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA++++IP + S ++ L K+++L   +G  D++ +   I   +   G   E ++    IY
Sbjct: 361 QALKAMIPNIVSNFIALFKDTTLVSIIGLYDMLLMLKAIGRNSSWIGLHHEPLIFGAAIY 420

Query: 375 LSLSIMIALFMNRLNA 390
             +   ++ +   L  
Sbjct: 421 FIICFAMSKYSQHLEN 436


>gi|56695435|ref|YP_165783.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Ruegeria pomeroyi DSS-3]
 gi|56677172|gb|AAV93838.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Ruegeria pomeroyi DSS-3]
          Length = 437

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 68/314 (21%), Positives = 123/314 (39%), Gaps = 32/314 (10%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  G +     A  G +   +I + V     S   ++       V        ++  F
Sbjct: 153 WLLWGGTIWGPIAALLGFVLGWVIYSAVSKTMSSLIGILLGAAAALVWW-----LVLAGF 207

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F+      +    +      FG F+         L++         S  LGIVL+L    
Sbjct: 208 FVGVFDSVLAIGIEAVESRKFGGFM---------LSITIGVVAIACSLPLGIVLAL---- 254

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R       K + + +I       L TL+ +A      F  P           T     
Sbjct: 255 -GRQSDLLIVKYICVGFIEFIRGVPLITLLFVASTLLNIFMPP----------GTNFDII 303

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           + + I ++ + AA++AE++R GL A+P+GQ E A +LGL + +A RL+++PQA++  IP 
Sbjct: 304 LRVLIMVTLFAAAYMAEVIRGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPG 363

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIAL 383
           + S ++ + K++ L   +G  D + +   I    N  G   EI      I+      ++ 
Sbjct: 364 IVSTFIGVFKDTVLVSIIGLLDPLGLSNAIRADANWNGIVWEIYGFIALIFFVFCFGMSR 423

Query: 384 FMNRLNAKIALKEK 397
           +   L  K+    +
Sbjct: 424 YSMYLERKLHTGHR 437


>gi|239820512|ref|YP_002947697.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
 gi|239805365|gb|ACS22431.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 226

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 13/233 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + L    L            +  +  +LG  LS+    L R+      +A    Y+ 
Sbjct: 1   MFDITLLWSVLPALVEGAGLTLALTAWVILLGTALSI-PVALGRNARAAGLRAAAHAYVL 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFI 281
            F   G P LV + L Y         GQF+ I  S + P     +  + IAL   +AA+ 
Sbjct: 60  FF--RGTPALVQLFLLYYGA------GQFDLIRHSVLWPVLRDPYWCVVIALGLNSAAYT 111

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            + + + L A+PRG  EAA  LGL   +A  L+ LP A+R+ +P   ++ +   K +SLA
Sbjct: 112 GKTLGAALAAIPRGTREAARVLGLGRAQAFGLIDLPLAVRAALPAFGNEIILTCKATSLA 171

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             V   +L      +  +T    EI L    +YL+++ ++   +  L A +  
Sbjct: 172 STVTLLELTGSARLLTAETYAPYEIFLGAGLVYLAINYVLLRGVRALEASLHR 224


>gi|71733796|ref|YP_273643.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257486646|ref|ZP_05640687.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289625250|ref|ZP_06458204.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289647247|ref|ZP_06478590.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|298488753|ref|ZP_07006781.1| histidine transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|71554349|gb|AAZ33560.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|298156671|gb|EFH97763.1| histidine transport system permease protein [Pseudomonas savastanoi
           pv. savastanoi NCPPB 3335]
 gi|320325645|gb|EFW81707.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320327072|gb|EFW83086.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330867261|gb|EGH01970.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330984856|gb|EGH82959.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331010124|gb|EGH90180.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 236

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 92/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+     +R    +  +    
Sbjct: 6   QEYWKPFLYTDGVNITGLAMTMWLLSASIAIGFCVSIPLSI-----ARVSKNRWVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSIAAVREQPML-DAFFRDAMNCTILAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  ITGLAMTMWLLSASIAIGFCVSIPLSIARVSKNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSIAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAI 125


>gi|254469494|ref|ZP_05082899.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
 gi|211961329|gb|EEA96524.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudovibrio sp. JE062]
          Length = 372

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 64/253 (25%), Positives = 122/253 (48%), Gaps = 18/253 (7%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           L  S+                  +++  L    LTM        FS  +GIVL+L     
Sbjct: 135 LMASMTYPFVAFWLIWGGFGLEPVSSTKLGGLLLTMIIGVSGISFSLPIGIVLAL----- 189

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           SR  +    K+L +++I       L TL+ +A    L++  P    F+ +         +
Sbjct: 190 SRSSNLPIVKSLAVIFIEFIRGVPLITLLFVA-HVLLNYFLPKGVNFDIV---------L 239

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            + I ++ + +A++AE++R GL A+P+GQ EAA ALGL++ ++ RL++LPQA++  IP +
Sbjct: 240 RVVIMVTLFASAYMAEVIRGGLAALPKGQYEAADALGLSYWQSMRLIILPQALKISIPGI 299

Query: 328 TSQYLNLLKNSSLAVAVGFADLVS-VGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALF 384
            + ++ L K+++L + +G  D +  V  T+ +Q   G  +E+     F++      ++ +
Sbjct: 300 VNTFIGLFKDTTLVLIIGLMDPLGLVAPTLADQRWNGIFVELYAFIAFMFFIFCFAMSRY 359

Query: 385 MNRLNAKIALKEK 397
              L  K+    +
Sbjct: 360 SMYLERKLHTGHR 372



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 36/76 (47%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G + T  +  SG+  +  IG ++   R S   +V  +  +++E  R +P + ++F  +
Sbjct: 163 LGGLLLTMIIGVSGISFSLPIGIVLALSRSSNLPIVKSLAVIFIEFIRGVPLITLLFVAH 222

Query: 150 KSVLSVLPIPDHSIVL 165
             +   LP   +  ++
Sbjct: 223 VLLNYFLPKGVNFDIV 238


>gi|222102595|ref|YP_002539634.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
 gi|221739196|gb|ACM39929.1| ABC transporter membrane spanning protein (nopaline) [Agrobacterium
           vitis S4]
          Length = 256

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 89/253 (35%), Gaps = 11/253 (4%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS---- 208
           +   P       L  G       L              + +  L ++LS+    L     
Sbjct: 1   MRPGPWLHWPRELREGFAHMLEKLHLLGFAEGGWGPALIGAAALTLLLSVLGFMLGACFG 60

Query: 209 ------RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                 R    +  + +   Y + F       L +    Y        +  F        
Sbjct: 61  SLAAAGRLSSARIPRVIASAYATVFRGVPD-LLTIYLFYYGGSVALTTVAHFFGANSFVG 119

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P   +  +A+   + A+ AE+ R   +AV RGQ +AA AL L+  +   LV+LPQ +R 
Sbjct: 120 LPALATGVVAIGMISGAYQAEVYRGAYLAVERGQFDAAKALDLSRSQMLLLVILPQLLRH 179

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            IP L++ +  +LK+S+L   VG  +L+         T +     L    +Y  ++ +  
Sbjct: 180 AIPGLSNVWQLVLKDSALISVVGLVELMRQSQIGAGSTREPFLFYLAAACLYFVMAGVTG 239

Query: 383 LFMNRLNAKIALK 395
            F      + +  
Sbjct: 240 RFFRSAEVRTSRG 252



 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A++     T  L+  G +     G+L  AGRLS+ ++   I   Y  VFR +P L+ 
Sbjct: 34  WGPALIGAAALTLLLSVLGFMLGACFGSLAAAGRLSSARIPRVIASAYATVFRGVPDLLT 93

Query: 145 IFFLYKSV 152
           I+  Y   
Sbjct: 94  IYLFYYGG 101


>gi|116494751|ref|YP_806485.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|191638263|ref|YP_001987429.1| Glutamine ABC transporter, permease protein [Lactobacillus casei
           BL23]
 gi|227535252|ref|ZP_03965301.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|301066312|ref|YP_003788335.1| amino acid ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|116104901|gb|ABJ70043.1| amino acid ABC transporter membrane protein, PAAT family
           [Lactobacillus casei ATCC 334]
 gi|190712565|emb|CAQ66571.1| Glutamine ABC transporter, permease protein [Lactobacillus casei
           BL23]
 gi|227187136|gb|EEI67203.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|300438719|gb|ADK18485.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei str. Zhang]
 gi|327382296|gb|AEA53772.1| ABC transporter, permease protein [Lactobacillus casei LC2W]
 gi|327385491|gb|AEA56965.1| ABC transporter, permease protein [Lactobacillus casei BD-II]
          Length = 218

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 13/194 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+   A   + S  LG++LS+      +    K GK L   Y+  F   G P L
Sbjct: 12  LSGVKMTLGIFAITLIGSIPLGLILSVGLIPKPKSILGKAGKGLLEGYVWVF--RGTPLL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V   F +  +A     AA+ AEI R G  A+  G
Sbjct: 70  LQLMFIF---YGLPII--------GLVFDRFSAALVAFILNYAAYFAEIFRGGFGAIDEG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+  L +T  +A R V++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 119 QFEASTVLNMTRWQALRYVVIPQVVKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNI 178

Query: 356 IINQTGQAIEIILI 369
              +    + ++L+
Sbjct: 179 ASARDVTLVPLVLV 192


>gi|269219726|ref|ZP_06163580.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269210968|gb|EEZ77308.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 219

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 86/224 (38%), Gaps = 18/224 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A     S  +G+V ++      R+      K    LYI   L    
Sbjct: 11  PYFLEGALVTVRVAAVGIAASLAIGLVCAII-----RYLDVPVAKRAVGLYIE--LSRNT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   Y                   V     S  I LS     ++AE  RSG  +V
Sbjct: 64  PLIVQLFFIYY-----------GLPKAGVVLSSEASAIIGLSFLGGGYMAEAFRSGFDSV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
              Q E+A +LG+T   A   V++PQA+   +  L +  + L+K +S+   V   DLV V
Sbjct: 113 GTIQWESAQSLGMTRVNAMVYVIVPQALSRSVAALVANVIFLVKETSVVSVVALNDLVYV 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               I       E + + +  Y+++ + ++L    L  +    E
Sbjct: 173 AREKIGNDYDTTEALFLLVAFYIAIILPVSLAGAYLERRARRAE 216



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    L G + T  +A  G+  +  IG +    R     +      +Y+E+ RN P +V 
Sbjct: 9   YLPYFLEGALVTVRVAAVGIAASLAIGLVCAIIRYLDVPVAKRAVGLYIELSRNTPLIVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +FF+Y  +     +         G+     G          ++   +
Sbjct: 69  LFFIYYGLPKAGVVLSSEASAIIGLSFLGGGYMAEAFRSGFDSVGTI 115


>gi|260467392|ref|ZP_05813564.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259028852|gb|EEW30156.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 103/234 (44%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +      +      + T     V S +    L      + R     TG A+     
Sbjct: 1   MGFNVDFALSTVPMIIGAIGTTLLATVLSCLGASALGFIFE-MIRRGGGVTGLAVR---- 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             FLI  + +  ++A  Y L+F  P                     + LS Y + ++AE+
Sbjct: 56  --FLIDFIRSTPVLAWLYFLYFVLPFY--------GIRLGAMTVGILGLSLYYSGYLAEV 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            ++G+ A+P+GQ EAA AL LT R     V+ PQ +R++  PL +  +++LK +     +
Sbjct: 106 FKAGIDAIPKGQQEAARALSLTRRDTVVFVIAPQMLRNVAAPLGNYLVSILKATPYLAIL 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +++     I ++T +  E + +   ++L+L+++IA  + R+  ++    ++
Sbjct: 166 AVPEMLGRAFDIASETYRYAEPLTVAGIVFLALALLIAYGVKRIEQRLLAVGRR 219


>gi|295096062|emb|CBK85152.1| amino acid ABC transporter membrane protein 1, PAAT family (TC
           3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 248

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 14/226 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L +      T   + +   +L  +L+LF   L R    + G  +   ++S F     P
Sbjct: 13  QPLHWILSGFLTTLWVTLAGIMLASLLALFFMLL-RLSGGRFGTLIVSGWVSLF--RNTP 69

Query: 234 TLVLIALKYQLHFD---------KPVLGQFNFIGGSTVS--PEFMSLYIALSCYTAAFIA 282
            LV +   Y   ++               ++ + G      PEF+     L  +T+AF+ 
Sbjct: 70  LLVQLLFWYFAAWNGLPQGLRDAVNADHSWSILPGDVWWFTPEFLCSAWGLGVFTSAFLI 129

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E V SGL +VP GQ EAA+A G +  +  R +LLPQ + +   P+  QYLNL+K SSLA 
Sbjct: 130 EEVESGLRSVPAGQREAALAQGFSSWRLFRYILLPQGLANAWQPVVGQYLNLMKLSSLAS 189

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            +GFA+L      I +    A+E   +   +YL   ++    + RL
Sbjct: 190 GIGFAELTYQVRQIESYNAHALEAFTVGTVLYLLTGMVTGSVLVRL 235



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 50/150 (33%), Gaps = 3/150 (2%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL GF+ T W+  +G++ A+++       RLS  +    I   +V +FRN P LV + F
Sbjct: 17  WILSGFLTTLWVTLAGIMLASLLALFFMLLRLSGGRFGTLIVSGWVSLFRNTPLLVQLLF 76

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            Y +  + LP      V       +   L               +   +     L     
Sbjct: 77  WYFAAWNGLPQGLRDAVNAD---HSWSILPGDVWWFTPEFLCSAWGLGVFTSAFLIEEVE 133

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           S       G+    L            ++L
Sbjct: 134 SGLRSVPAGQREAALAQGFSSWRLFRYILL 163


>gi|257069403|ref|YP_003155658.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256560221|gb|ACU86068.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 297

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 112/234 (47%), Gaps = 11/234 (4%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            +    G    N  L     T+ ++    V + + G++         R       +    
Sbjct: 53  WLNAVNGNAWTNYYLPGLQFTLQSSGIAVVTAMIFGLIFGFL-----RLAPFAIIRGASG 107

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +  F    +P LV++   Y     +           ++    + ++ I L+ Y  A I
Sbjct: 108 IVVEFF--RAVPVLVMMFFLYFFLSRRVAPTGLF----ASEDSAYFAVIIGLTVYNGAVI 161

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE++RSG+ ++P+GQ EAA A+G+T+ ++ R+V +PQA+ +++P L SQ++ +LK+S+L 
Sbjct: 162 AELIRSGVRSLPKGQREAAAAIGMTNNQSLRIVEVPQALTAMLPSLLSQFVVILKDSALG 221

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +GF +L+     + +     ++ +++   I++ ++ ++      L  +++ +
Sbjct: 222 FLIGFYELLQYSRQLGSGYSNILQSLVMAALIFIVINYLLTRVATWLAGRLSSR 275



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            +   + +++    L G   T   +   ++ A I G + G  RL+   ++     + VE 
Sbjct: 53  WLNAVNGNAWTNYYLPGLQFTLQSSGIAVVTAMIFGLIFGFLRLAPFAIIRGASGIVVEF 112

Query: 136 FRNIPPLVVIFFLYK 150
           FR +P LV++FFLY 
Sbjct: 113 FRAVPVLVMMFFLYF 127


>gi|72382451|ref|YP_291806.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Prochlorococcus marinus str.
           NATL2A]
 gi|72002301|gb|AAZ58103.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Prochlorococcus marinus str. NATL2A]
          Length = 344

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 18/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + +R     TLT+       + S  +GI+L+L      RH      + L  ++I      
Sbjct: 128 IMSRQWGGLTLTILLTVCSSLLSLPIGIILALC-----RHSSLPIIQKLSSIFIDV---- 178

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  + LIA+ +      P+     F+              A + + +A+IAE +R GL 
Sbjct: 179 -MRAIPLIAVLFFGQLLIPL-----FLPVEIEIDRVWRAIFAFTLFVSAYIAEDIRGGLQ 232

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P  Q+EAA +LGL   +  + +L+PQA+R  +P LT+Q + L +N+SL   +G  +L+
Sbjct: 233 SIPNTQIEAANSLGLNQYQIIQFILIPQALRIALPALTNQSIGLFQNTSLMAILGLVELL 292

Query: 351 SVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +G +I+      GQ IE+ +    +Y  +  ++A+    L  ++ +
Sbjct: 293 GIGRSILANPEFIGQYIEVYVWLACVYWIVCTIMAVLARHLEQRMTI 339



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 68/196 (34%), Gaps = 5/196 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L     + +  IG ++   R S+  ++  +  ++++V R IP + V+FF    
Sbjct: 135 GLTLTILLTVCSSLLSLPIGIILALCRHSSLPIIQKLSSIFIDVMRAIPLIAVLFFGQLL 194

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +   LP+      +   +F     +S             + +  +    SL   +     
Sbjct: 195 IPLFLPVEIEIDRVWRAIFAFTLFVSAYIAEDIRGGLQSIPNTQIEAANSLGLNQYQIIQ 254

Query: 212 HEKTGKAL-----PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
                +AL      L   S  L      + ++ L   L   + +L    FIG       +
Sbjct: 255 FILIPQALRIALPALTNQSIGLFQNTSLMAILGLVELLGIGRSILANPEFIGQYIEVYVW 314

Query: 267 MSLYIALSCYTAAFIA 282
           ++    + C   A +A
Sbjct: 315 LACVYWIVCTIMAVLA 330


>gi|88601349|ref|YP_501527.1| amino acid ABC transporter permease [Methanospirillum hungatei
           JF-1]
 gi|88186811|gb|ABD39808.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Methanospirillum hungatei JF-1]
          Length = 223

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 2/200 (1%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPL--LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           GIVL+L     +       G  L L  +Y S  +   + T V       +     +    
Sbjct: 16  GIVLTLGLVASALIIGAGVGLPLALGQVYGSLPVRSAIATFVWFFRGLPVLVLLFLFYFG 75

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            F       P F    + L  + AA+ +++ R  + ++  GQM AA +LG++  +A + +
Sbjct: 76  IFPALGLDLPAFYVGAVVLGLWGAAYQSQVFRGAIQSISEGQMIAARSLGMSRFQAIKSI 135

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R  +P  ++QY  +L  SS+  A+G A+L++    I++QT   + I L    I+
Sbjct: 136 ILPQALRIALPGWSNQYPEILTESSVCYAIGVAELLTRSSQIVSQTYVTMPIYLACAVIF 195

Query: 375 LSLSIMIALFMNRLNAKIAL 394
           + LS      ++ +  KIA+
Sbjct: 196 ILLSYAGTSCIHMVEKKIAI 215


>gi|219852262|ref|YP_002466694.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanosphaerula palustris E1-9c]
 gi|219546521|gb|ACL16971.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanosphaerula palustris E1-9c]
          Length = 225

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 80/177 (45%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           AL  +Y    L   + T V I           +     F         F    + L   +
Sbjct: 41  ALAQVYGKRLLSAIVATYVWIFRGLPNLVLLFLFYFGLFPLAGLDVDPFFVGIVVLGLRS 100

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ ++I R  + ++  GQM AA +LG++  +A   V+LPQA R  +P  +++Y  LL +
Sbjct: 101 GAYQSQIFRGAIQSIGDGQMLAARSLGMSRVQAITSVILPQAFRIALPGWSNEYPILLTD 160

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           S++  A+G  ++++    I+ QT Q + + LI   IY+ L+       + +  +  +
Sbjct: 161 SAVCYAIGIMEILTRANNIVTQTYQPMPVFLICAGIYILLNYGGLKIFHFVEKRYRI 217


>gi|237731335|ref|ZP_04561816.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
 gi|226906874|gb|EEH92792.1| polar amino acid ABC transporter [Citrobacter sp. 30_2]
          Length = 261

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 14/238 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + +   L+ + L +      T   + +   VL  ++++    L R    +  KA+  
Sbjct: 1   MHAMDWQGVLSGQPLQWIISGFLTTLWVTLAGIVLATLIAISLLGL-RLTGNRLAKAMVG 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG-----------STVSPEFMSLY 270
           +++S F     P LV +   Y   ++       +FI               ++PEF+   
Sbjct: 60  VWVSVF--RNTPLLVQLMFWYFAAWNWLPRDVISFINADHPWSILPGDVWWLTPEFICSA 117

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             L  +T+AF+ E + SGL AV  GQ EAA+A G +     R +LLPQ + +   P+  Q
Sbjct: 118 WGLGVFTSAFLVEEIASGLQAVSAGQREAAVAQGFSSWAIFRHILLPQGLANAWQPIVGQ 177

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           YLNL+K SSLA  +GFA+L      I +    A+E   +   +YL   I++ + + RL
Sbjct: 178 YLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTVLYLFTGIILGMLLTRL 235



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 4/153 (2%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ T W+  +G++ AT+I   +   RL+ N+L   +  V+V VFRN P LV +
Sbjct: 15  LQWIISGFLTTLWVTLAGIVLATLIAISLLGLRLTGNRLAKAMVGVWVSVFRNTPLLVQL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL----NNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            F Y +  + LP    S +     +     +   L+   +       +F  +F++  + S
Sbjct: 75  MFWYFAAWNWLPRDVISFINADHPWSILPGDVWWLTPEFICSAWGLGVFTSAFLVEEIAS 134

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                 +        +      I   ++     
Sbjct: 135 GLQAVSAGQREAAVAQGFSSWAIFRHILLPQGL 167


>gi|294085012|ref|YP_003551772.1| polar amino acid uptake family ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664587|gb|ADE39688.1| polar amino acid uptake family ABC transporter, permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 296

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 94/267 (35%), Gaps = 14/267 (5%)

Query: 135 VFRNIPPL--VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
              N+PP   +V+                  ++     L              N  I +F
Sbjct: 37  WLANLPPWTGLVLMLPLLLWPFTSHAAGSFTLITAFGILTKWMPFLLKSGFLFNIVISLF 96

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S + G +  +    L++       + L       F       ++ I L         +  
Sbjct: 97  SMLFGTIFGIILG-LAQISKIAPIRRLSWFITQLFRNSPWLVILFIVL-------LALPF 148

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +    G     P++M     LS    A I+EIVR  + +VP  Q EA+ +L  + ++   
Sbjct: 149 EIVIFGYIIYVPDWMKAVFGLSLPIMANISEIVRGAVQSVPTAQWEASESLAFSRQQTLW 208

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIIL 368
            ++LPQ  + +IPP  + Y  L   + L   +G  +++++    +          +    
Sbjct: 209 RIILPQCFKRMIPPWMNWYAILTMATPLCSLLGVEEIITLSRQAMEAENNHPELLVPFYS 268

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALK 395
             + ++      IA F  RL  K A+K
Sbjct: 269 FALGLFFIYCYPIARFTMRLERKYAVK 295



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 8/100 (8%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F I    +P+   S        GF+    ++   M+  TI G ++G  ++S    +  + 
Sbjct: 72  FGILTKWMPFLLKS--------GFLFNIVISLFSMLFGTIFGIILGLAQISKIAPIRRLS 123

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
               ++FRN P LV++F +  ++   + I  + I +P  M
Sbjct: 124 WFITQLFRNSPWLVILFIVLLALPFEIVIFGYIIYVPDWM 163


>gi|284009201|emb|CBA76271.1| amino acid ABC transporter, permease protein [Arsenophonus
           nasoniae]
          Length = 244

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 13/210 (6%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-----TFLIFGLPTLVLIALKYQLHFD 247
              L +++SL A  +S       G AL +L          ++     + +I L +  +F 
Sbjct: 25  GAALTLLISLLAGGISIFLGIAGGIALAMLKGWWANLLAAVLGFFRAIPVIMLIFWSYFL 84

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            PVL         T  PE  ++  AL+   +A++A  V++G++A+ +GQ +A ++LG T 
Sbjct: 85  LPVLLG-------TDIPELTTVICALALIASAYLAHGVKAGILAIGQGQWQAGMSLGFTR 137

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEI 366
                 ++LPQA+R ++P   +Q++ L+K++SLA  VG A+L  +   + N+     +EI
Sbjct: 138 WAVLWHIILPQALRMMLPSFINQWIALIKDTSLAYIVGVAELSFLATQVNNREMIYPMEI 197

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            L    IY  +   + +  N++  ++    
Sbjct: 198 FLFVALIYFIMCFSLEMIANQILRRLEKNR 227


>gi|330877313|gb|EGH11462.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330966544|gb|EGH66804.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 236

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+   R+SR+   +       
Sbjct: 6   QEYWKPFLYTDGVNITGLAMTMWLLSASIAIGFCVSIPLSIA--RVSRNRWVRWPVQF-- 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 62  ---YTYLFRGTPLYIQLLICYTGIYSIAAVREQPML-DAFFRDAMNCTILAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAAMYLTVTFILVGLFRLAERR 227



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  ITGLAMTMWLLSASIAIGFCVSIPLSIARVSRNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSIAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAI 125


>gi|293193555|ref|ZP_06609825.1| amino acid ABC transporter, permease protein [Actinomyces
           odontolyticus F0309]
 gi|292819911|gb|EFF78913.1| amino acid ABC transporter, permease protein [Actinomyces
           odontolyticus F0309]
          Length = 219

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 16/228 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
           +N   L+         A + +    +GIV SL         R +       +   Y+   
Sbjct: 1   MNLDILARYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIRQYRIPVAAQIAAAYVE-- 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L    P LV +   Y           F                I L     A++AE +RS
Sbjct: 59  LSRNTPLLVQLFFIY-----------FGLPRVGIKWSGETCAIIGLIFLGGAYMAEALRS 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL ++   Q E++ ALGLT  +  R V LPQA+ + +PPL +  + L+K +S+   V   
Sbjct: 108 GLDSIATIQWESSAALGLTRTQTLRHVALPQAIATSVPPLAANVIFLIKETSVVSVVALP 167

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           DLV V   +I  +    E +++ +  YL + + +++    +  K+   
Sbjct: 168 DLVYVAKDLIGMSYNTSEALILLVIAYLVILLPVSIAARLIEKKVRRG 215



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 36/75 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA   +   + T  +A  G++ +  +G LV A R     + A I   YVE+ RN P LV
Sbjct: 8   RYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIRQYRIPVAAQIAAAYVELSRNTPLLV 67

Query: 144 VIFFLYKSVLSVLPI 158
            +FF+Y  +  V   
Sbjct: 68  QLFFIYFGLPRVGIK 82


>gi|76809245|ref|YP_333449.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei 1710b]
 gi|126440194|ref|YP_001058921.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 668]
 gi|126451643|ref|YP_001066164.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 1106a]
 gi|134282328|ref|ZP_01769033.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|217421609|ref|ZP_03453113.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
 gi|242317304|ref|ZP_04816320.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254188734|ref|ZP_04895245.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254198163|ref|ZP_04904585.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|254260903|ref|ZP_04951957.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|76578698|gb|ABA48173.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei 1710b]
 gi|126219687|gb|ABN83193.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 668]
 gi|126225285|gb|ABN88825.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|134246366|gb|EBA46455.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 305]
 gi|157936413|gb|EDO92083.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|169654904|gb|EDS87597.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei S13]
 gi|217395351|gb|EEC35369.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 576]
 gi|242140543|gb|EES26945.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254219592|gb|EET08976.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
          Length = 247

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 63  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 116 HAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 175

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 176 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 212


>gi|167036207|ref|YP_001671438.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862695|gb|ABZ01103.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 219

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 17/207 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   +F+ + G++  + AT  +R  +         L +   L   +P LV + L +   F
Sbjct: 28  ALGILFATLGGVLYGVLATLGNRALNIA-------LQVYLELFRAIPVLVWLYLVF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + L+ + A+ + E+VR  L ++PRGQ EA +++GL 
Sbjct: 78  GLPIFFALSI-------PSFWCAVLVLALWGASEVGEVVRGALRSLPRGQREAGLSIGLA 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    VLLPQA++ + PP  + Y  ++K SSLAV +G  +++  G  II +T +++ I
Sbjct: 131 GWQLYGYVLLPQALKRMTPPTINIYTRIIKTSSLAVLIGVVEVIKAGQQIIERTYESVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  +  +   ++     L  + A
Sbjct: 191 YGALFLFFFIVCYPLSAASRVLERRWA 217



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 33/62 (53%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++  G++ AT+ G L G      N+ +    +VY+E+FR IP LV ++ ++  
Sbjct: 19  GAAQTLAISALGILFATLGGVLYGVLATLGNRALNIALQVYLELFRAIPVLVWLYLVFFG 78

Query: 152 VL 153
           + 
Sbjct: 79  LP 80


>gi|163868114|ref|YP_001609318.1| ABC transporter, permease protein [Bartonella tribocorum CIP
           105476]
 gi|161017765|emb|CAK01323.1| ABC transporter, permease protein [Bartonella tribocorum CIP
           105476]
          Length = 235

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 5/240 (2%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +    +   F   L NR  S          ++   S  LG  L +     +R       +
Sbjct: 1   MIPEWLYFIFNPDLLNRYGSKFIDGFIVTVELVSISCSLGFFLGMLI-AFARLSKNMFLQ 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                Y+  F   G P L  + L Y          Q   +     +  +  L+I  +  +
Sbjct: 60  YFANAYVYFF--RGSPLLAQLFLFYYGLGSMNNFWQQIGLWWFFQNAWYCCLFI-FTLNS 116

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ +EI +   ++V  GQ EA+ ALGL++      V+LPQAM   + PL ++ + ++K+
Sbjct: 117 AAYQSEIFKGSFLSVTTGQREASKALGLSNSVTFFRVILPQAMIVALRPLGNELILMIKS 176

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           S++A  V   DL+ +     ++T    ++ +    IYL +  +I  F+  +   +    +
Sbjct: 177 SAIASLVTVYDLMGIAKLTYSRTFD-FQVYVWAALIYLFIVELIHRFIVFIEHHLTRYLR 235



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 2/104 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y +  + GF+ T  L          +G L+   RLS N  + +    YV  FR  P L 
Sbjct: 17  RYGSKFIDGFIVTVELVSISCSLGFFLGMLIAFARLSKNMFLQYFANAYVYFFRGSPLLA 76

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            +F  Y  + S+        +  +  F N         T+++ A
Sbjct: 77  QLFLFYYGLGSM--NNFWQQIGLWWFFQNAWYCCLFIFTLNSAA 118


>gi|116326668|ref|YP_796442.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
 gi|116106486|gb|ABJ71627.1| ABC-type amino acid transport system, permease component
           [Lactobacillus casei ATCC 334]
          Length = 229

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 91/213 (42%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI   + ++G++L +    L R F  +  + +  LY+  F I     L+ +     
Sbjct: 23  WVTVKIAAVALIVGLILGIILGVL-RTFKNRPLRVVLRLYLEFFRIVPTVVLLFLF---- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            ++  P    FN  G            +  + + AA +++IVR  L +VP+ Q E+  A+
Sbjct: 78  -YYILPRQLNFNLPGDQL-------ATLVFALWVAAEMSDIVRGALSSVPQHQRESGKAI 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R VL+PQA+   IP   +    ++K +SL + +   D++++G  II      
Sbjct: 130 GLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQIIEANNHT 189

Query: 364 -----IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +    Y  +   ++ +  RL  K
Sbjct: 190 HPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKK 222



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 35/66 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   +I   I+G ++G  R   N+ +  + R+Y+E FR +P +V++F  
Sbjct: 18  LLGGLWVTVKIAAVALIVGLILGIILGVLRTFKNRPLRVVLRLYLEFFRIVPTVVLLFLF 77

Query: 149 YKSVLS 154
           Y  +  
Sbjct: 78  YYILPR 83


>gi|16801503|ref|NP_471771.1| hypothetical protein lin2441 [Listeria innocua Clip11262]
 gi|16414963|emb|CAC97668.1| lin2441 [Listeria innocua Clip11262]
          Length = 235

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 3/214 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKY 242
                +  F  + G ++++  T L R +H +  + +   Y+S F        ++LI L  
Sbjct: 20  PLTLAMTFFPILFGFIIAILLT-LIRMYHVRFLEPIAKFYVSFFRSTPAILHIMLIYLGI 78

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L  D  +    +    +   P  + + IALS    A++ EI+RSG+IAV  GQMEAA +
Sbjct: 79  PLIVDF-LSKSLDLSISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYS 137

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G TH +A R VLLPQA  + +P  T+  +  L  +S+A  V   ++  +   + +    
Sbjct: 138 MGYTHGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYA 197

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +E  +    IY  L+I+I      L   IA  +
Sbjct: 198 FLEAFIGAALIYWFLTILIEAINYILEKNIAKYQ 231


>gi|116491637|ref|YP_811181.1| ABC-type amino acid transport system, permease component
           [Oenococcus oeni PSU-1]
 gi|290891246|ref|ZP_06554308.1| hypothetical protein AWRIB429_1698 [Oenococcus oeni AWRIB429]
 gi|116092362|gb|ABJ57516.1| amino acid ABC transporter membrane protein, PAAT family
           [Oenococcus oeni PSU-1]
 gi|290479210|gb|EFD87872.1| hypothetical protein AWRIB429_1698 [Oenococcus oeni AWRIB429]
          Length = 220

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 12/221 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      L      ++    +F  + +    L +    L         + L   Y+  ++
Sbjct: 1   MHYIFSILPDILSGLNITVGLFFLTLIGATPLGIL-MALGMRSQFFVLRWLLNAYV--WV 57

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P ++ +   Y   F  P+           V P+  +  +      + + AEI R G
Sbjct: 58  IRGTPLMLQLMFVY---FGLPIASN-----NEIVFPKMTAAVVVFILNYSGYFAEIFRGG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + A+P+ Q +AA  LG+  R+  + ++LPQ    ++P   ++ +NL+K++SL   +   D
Sbjct: 110 IQAIPQAQYDAAGVLGINRRQTFQKIILPQVFNIVLPSFGNEIINLIKDTSLGYVISLVD 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++ +           +   +I   IYL  + +  L M R+ 
Sbjct: 170 ILYIAQGHAVAD-VTLLPYVIVAAIYLIFTALATLIMKRIE 209



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    IL G   T  L F  +I AT +G L+  G  S   ++ W+   YV V R  P ++
Sbjct: 6   SILPDILSGLNITVGLFFLTLIGATPLGILMALGMRSQFFVLRWLLNAYVWVIRGTPLML 65

Query: 144 VIFFLYKSVL 153
            + F+Y  + 
Sbjct: 66  QLMFVYFGLP 75


>gi|292670512|ref|ZP_06603938.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Selenomonas noxia ATCC 43541]
 gi|292647922|gb|EFF65894.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Selenomonas noxia ATCC 43541]
          Length = 235

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 92/233 (39%), Gaps = 6/233 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L F             +T+   A   +F+  +G   ++      R    + G ++   Y+
Sbjct: 5   LDFMQETFLLVWQGAGVTLSLTALALIFAAPVGFYFAVL-----RVRGYRVGGSIARFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAE 283
           S      L   +L+           ++      I        F       +  T A + E
Sbjct: 60  SFVRGTPLILQILLLYSLLPSLLNVLVKDIGLEINVFEAVDPFWYAVFIFTINTIALLTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             RS L+A+P+GQ+EA +A GL+  +    V++PQA+   +P + +  +NL+K +SLA  
Sbjct: 120 AFRSALLAIPKGQLEAGLAGGLSELQTYLHVIIPQALVVALPSIANITVNLIKGTSLAFL 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   D+ +VG    +     IE  L    +YL L  ++ L       ++    
Sbjct: 180 MTVKDITAVGKVAASYGYNYIEAYLDVFLVYLVLCTVVQLLFAAAERRVGAFR 232


>gi|52144758|ref|YP_082070.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|51978227|gb|AAU19777.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
          Length = 217

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 7/179 (3%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +T K   L +IS   I    ++ ++   +   F  P       I         ++   A
Sbjct: 44  VRTSKITILRFISRTYIELFRSIPILVWLFLFFFGLP-------IALGIDVSSTVAAITA 96

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           LS +    I EIVR  L ++P+GQ+EA  ++GL   +  + VL+PQA+R +IP   + ++
Sbjct: 97  LSLWGITEIGEIVRGALQSLPKGQVEAGKSIGLNKNQLYQYVLIPQAIRRMIPATINIFI 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +++ +SL V +G  +++  G  I+ +TG+A  I       Y  L   ++++  +L  +
Sbjct: 157 RIIQTTSLTVLIGVTEVIKAGQQIVERTGEAFLIYGCLFIFYFLLCYPLSIWSRKLETR 215



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   +I +TI G L G  R S   ++ +I R Y+E+FR+IP LV +F  
Sbjct: 16  LLKGLEQTLLIALFTIIISTIGGILFGIVRTSKITILRFISRTYIELFRSIPILVWLFLF 75

Query: 149 YKSVL 153
           +  + 
Sbjct: 76  FFGLP 80


>gi|311694311|gb|ADP97184.1| putative amino acid ABC transporter permease protein [marine
           bacterium HP15]
          Length = 221

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 98/224 (43%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + +            + V + +LG+V+++    +++  + K    +  +++   +    
Sbjct: 11  FQNMPQLLNGAFVTLHVSVLAMLLGVVIAILL-AIAKMNNTKFFSQVATVWVE--IARNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L  I + Y           F           ++++  AL    A ++ E  R G  ++
Sbjct: 68  PALFQIYMAY-----------FGLGAFGIHLSPYVAVLSALVFINAGYLTETFRGGFQSI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q  A+ +LG+T  +  R ++LPQ +R I  P+T+Q++  +  SSL + VG ++L   
Sbjct: 117 PSTQYSASKSLGMTSIQTYRYIILPQMLRRIYHPMTNQFVWSILMSSLGILVGMSELSGT 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              + + + + +E  ++   +Y  ++ ++    + L  ++   E
Sbjct: 177 TQRLQSLSFRTLEFFIVAAVMYFVITKLVLFGSSLLARRLFKGE 220



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   M+   +I  L+   +++  K  + +  V+VE+ RN P L  I+  
Sbjct: 17  LLNGAFVTLHVSVLAMLLGVVIAILLAIAKMNNTKFFSQVATVWVEIARNTPALFQIYMA 76

Query: 149 YKSVLSVLPI 158
           Y  + +    
Sbjct: 77  YFGLGAFGIH 86


>gi|302188856|ref|ZP_07265529.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
 gi|330949983|gb|EGH50243.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae Cit 7]
          Length = 236

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 92/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+     +R    +  +    
Sbjct: 6   QEYWKPFLYTDGVNVTGLAMTMWLLSASIAIGFCVSIPLSI-----ARVSKNRWVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSIAAVREQPML-DAFFRDAMNCTILAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  VTGLAMTMWLLSASIAIGFCVSIPLSIARVSKNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSIAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAI 125


>gi|237798793|ref|ZP_04587254.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021646|gb|EGI01703.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 236

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 94/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+     +R   ++  +    
Sbjct: 6   QEYWKPFLYTDGVNVTGLAMTMWLLSASIAIGFCVSIPLSI-----ARVSTKRWVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSLAAVREQPVL-DAFFRDAMNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P A+R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYTYVIMPSALRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAAMYLTVTFILVGLFRLAERR 227



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S  + V W  + Y  +FR  P  + +   Y
Sbjct: 20  VTGLAMTMWLLSASIAIGFCVSIPLSIARVSTKRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +    L             +
Sbjct: 80  TGIYSLAAVREQPVLDAFFRDAMNCTILAFALNTCAYTTEIFAGAI 125


>gi|159037031|ref|YP_001536284.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora arenicola CNS-205]
 gi|157915866|gb|ABV97293.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora arenicola CNS-205]
          Length = 235

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 13/226 (5%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLS------RHFHEKTGKALPLLYISTFLIFGL 232
             LT+       + + +LG ++++               +    + +PL  +  F  FGL
Sbjct: 15  FWLTLQICVLAAIGALILGTIVAVLRISPVPPLQAVGTAYVNIFRNMPLTIVMFFAAFGL 74

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P     AL     F +       F    T  P F    IAL  YTAAF+ E +RSG+ AV
Sbjct: 75  P-----ALGSNADFLRIPGLDIVFSRLGTDLPYFRFGLIALVLYTAAFVCEALRSGVNAV 129

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVS 351
           P GQ EAA +LGLT  +  R V+LPQ+  + + PL S  + ++KNS+L    G   DL  
Sbjct: 130 PAGQAEAARSLGLTFTQNLRHVVLPQSWAASVVPLGSVIIAMIKNSALIGFFGVVGDLSQ 189

Query: 352 VGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               + +  G+    + +     YL +++ + + ++R+  + A+  
Sbjct: 190 TADQLTSAGGEPFIPVAIGISIGYLIMTVPLGVLLDRIERRQAVAR 235



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 GF  T  +     I A I+GT+V   R+S    +  +   YV +FRN+P  +V+
Sbjct: 8   FDVFAGGFWLTLQICVLAAIGALILGTIVAVLRISPVPPLQAVGTAYVNIFRNMPLTIVM 67

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           FF    + ++    D   +    +  +  G   P       A + 
Sbjct: 68  FFAAFGLPALGSNADFLRIPGLDIVFSRLGTDLPYFRFGLIALVL 112


>gi|317403730|gb|EFV84215.1| amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 230

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 15/199 (7%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              V S + GI L+L       H   +     P+     F I   P LV I L Y   + 
Sbjct: 33  ASLVLSVLAGIPLALA------HMSARAWVWRPVAGYVQF-IRSTPLLVQIYLVY---YA 82

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+L     + G+    E +   +A++ + AA+++EI+R G+ +VPRGQ+E A A G+ +
Sbjct: 83  VPML-----VPGAKGWSEMLLGILAMTLHHAAYMSEIIRVGIESVPRGQIEGAKACGMNY 137

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R V+LPQA  + +PPL  Q   L+K++SL   +   +LV+ G  + ++     E  
Sbjct: 138 HQRLRYVVLPQAFANTLPPLLGQTAVLIKDTSLLSLITVFELVAAGVQMNSERIVPTESF 197

Query: 368 LIWMFIYLSLSIMIALFMN 386
           L     YL +  ++ L   
Sbjct: 198 LTIAAGYLLIYAVMLLLSR 216



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y      G VNT   A + ++ + + G  +    +SA   V      YV+  R+ P LV
Sbjct: 15  QYTGQFATGLVNTLIAAGASLVLSVLAGIPLALAHMSARAWVWRPVAGYVQFIRSTPLLV 74

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
            I+ +Y +V  ++P       +  G+      
Sbjct: 75  QIYLVYYAVPMLVPGAKGWSEMLLGILAMTLH 106


>gi|293552748|ref|ZP_06673409.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1039]
 gi|291603057|gb|EFF33248.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1039]
          Length = 179

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 11/174 (6%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            LPL     F +     +  + L + L+F  P                  +  I  +  +
Sbjct: 11  WLPLNVFIRFYLSFFRGIPALVLLFLLYFGLPYQL-----------SALTASVICFTITS 59

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +AFI EI R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  ++L+K 
Sbjct: 60  SAFIGEIYRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKG 119

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SLA  +   ++      I  +T     + ++   IY  + I I      L  +
Sbjct: 120 TSLAATITVPEIFQKAKIIGGRTFDYFSLYILVALIYWVICIGIEKVQQYLEKR 173


>gi|296117709|ref|ZP_06836293.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
 gi|295969440|gb|EFG82681.1| glutamate permease [Corynebacterium ammoniagenes DSM 20306]
          Length = 228

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 3/227 (1%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +  + L           ++  +S +  I+L    T + R       +++   YIS     
Sbjct: 4   MWEQLLPGLWPAFWLTIQLTFWSAIGAIILGTILTAM-RVSPVAILRSISTFYISVVRNT 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  +VL    + L+ +  +               F    +    YT+AF+AE +RSG+ 
Sbjct: 63  PLTLIVL-FCSFGLYQNLGMALASRESSTFLADNNFRLAIVGFILYTSAFVAESLRSGIN 121

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V  GQ EAA ++GL+     R ++ PQA+R+ I PL +  + L KN+++A  +G A+  
Sbjct: 122 TVDFGQAEAARSIGLSFSDMFRKIVFPQAVRAAIVPLGNTLIALTKNTTIASTIGVAEAS 181

Query: 351 SVGG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   TI N   Q   I  ++   ++ L++ + L + +L+ K+A+K+
Sbjct: 182 LLMKSTIENHANQLFIIFFVFALGFIILTLPMGLGLGKLSEKMAVKK 228



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 43/99 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +   F  T  L F   I A I+GT++ A R+S   ++  I   Y+ V RN P  +++ F 
Sbjct: 12  LWPAFWLTIQLTFWSAIGAIILGTILTAMRVSPVAILRSISTFYISVVRNTPLTLIVLFC 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              +   L +   S      +  NN  L+     + T+A
Sbjct: 72  SFGLYQNLGMALASRESSTFLADNNFRLAIVGFILYTSA 110


>gi|157369178|ref|YP_001477167.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157320942|gb|ABV40039.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 221

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 93/220 (42%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      + T  ++   + ++G+ L +    +         +   +  I   ++   
Sbjct: 11  WPYLPELLAGLLTTIELTALATLIGVALGICGAAIRSGKANLVSR---VWGIYVEVVRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPSLGWKLTAGQ--------AALLAMVINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGL+  +    ++LP +++ I P L SQ + ++  SS+   V F +L   
Sbjct: 117 PKGQWEAGRVLGLSRSQTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSFEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I ++T  + E+ L+    YL LSI++   +     + 
Sbjct: 177 ANLIQSRTFLSFEVYLVTALFYLLLSILMRQLLLAAGRRF 216



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G + T  L     +    +G    A R     LV+ +  +YVEV 
Sbjct: 5   LNFPALWPYLPELLAGLLTTIELTALATLIGVALGICGAAIRSGKANLVSRVWGIYVEVV 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P +V +FF+   + S+
Sbjct: 65  RNTPFVVQLFFIVFGLPSL 83


>gi|256831908|ref|YP_003160635.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Jonesia denitrificans DSM 20603]
 gi|256685439|gb|ACV08332.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Jonesia denitrificans DSM 20603]
          Length = 218

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 22/210 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + + VLG+VL++      R        A+ L +IS F I   P +V +   Y 
Sbjct: 28  YVTLVSSLIAAVLGLVLAIGRRSAPRPI------AVVLTFISDF-IRMTPIVVQLLFAYY 80

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L  D                       I    + A ++AE+ R+G+ +VP+GQ EA  AL
Sbjct: 81  LFLD---------------MEPITIGIIIFGIHYATYMAEVYRAGIDSVPQGQWEATTAL 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            ++  +    V++PQA+R+ +P L +  +++ K++   +A+   ++V    T        
Sbjct: 126 SMSRARTWIAVIIPQAVRATVPALGNYVISMFKDTPFLIAITVTEIVRAAQTYGGNHFTY 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           IE I +   I+L+ S   +L ++RL  ++A
Sbjct: 186 IEAITLTGVIFLASSYPTSLLISRLEKRLA 215



 Score = 36.8 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++     + A ++G ++  GR SA + +A +     +  R  P +V + F Y   L +
Sbjct: 26  TLYVTLVSSLIAAVLGLVLAIGRRSAPRPIAVVLTFISDFIRMTPIVVQLLFAYYLFLDM 85

Query: 156 LP 157
            P
Sbjct: 86  EP 87


>gi|110347319|ref|YP_666136.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium sp. BNC1]
 gi|110287495|gb|ABG65553.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chelativorans sp. BNC1]
          Length = 232

 Score =  115 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 108/240 (45%), Gaps = 19/240 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
            +   L FG + N      P         I + S VL    ++    L+R    +  +  
Sbjct: 7   QYWPYLLFGSYPN-----GPLGGFTMTLVIAIVSLVLTFPSAVLV-ALARTSEVRVLEHA 60

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             L+++  ++ G+P L+LI   Y           F  +   T    F SL +A+  +  A
Sbjct: 61  AFLFVT--IVRGIPLLMLIFWVYF----------FLPVALGTPISPFWSLILAIVVFQTA 108

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +++E++R+ + A+P+GQ EAA++LGL++      V LPQA+ + IP + +Q+ +++K +S
Sbjct: 109 YLSEVLRAAIEALPKGQTEAALSLGLSYFPRIWKVTLPQALYNSIPGILNQFTSMIKETS 168

Query: 340 LAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L   +   +L      + N    +   +  +    Y ++   +   +  L A+I  +  +
Sbjct: 169 LGYVLAVEELTYAANKVNNFILVKPFSVFALLALTYFAVCFTLTQLVRLLEARIENRFTR 228



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 40/94 (42%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ Q   PY    SY    L GF  T  +A   ++       LV   R S  +++     
Sbjct: 3   DVVQQYWPYLLFGSYPNGPLGGFTMTLVIAIVSLVLTFPSAVLVALARTSEVRVLEHAAF 62

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           ++V + R IP L++IF++Y  +   L  P     
Sbjct: 63  LFVTIVRGIPLLMLIFWVYFFLPVALGTPISPFW 96


>gi|254250414|ref|ZP_04943733.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124879548|gb|EAY66904.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 261

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 11/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      M  N  I   +  LG +  L    L         +     Y+  F     P 
Sbjct: 46  WLPALGNAMLVNIGISALAIALGTLAGLVLGPL-TLSRLGIARVAARAYVQVF--RNAPL 102

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVLI     +        +  F   S   P++  + + L+   +A  AEI R  + ++P 
Sbjct: 103 LVLIYFSTYVF-----PFEIRFGHASLPFPDWFKVTLGLALPASANFAEIFRGAIQSIPH 157

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q +AA +L  +  +  R ++LPQ +R ++PP  + Y ++   ++LA  VG  DL+    
Sbjct: 158 AQWDAARSLAFSRVQVFRWIILPQCVRRMLPPWMNLYASITMATALASLVGVHDLLDTAQ 217

Query: 355 TIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              N   +A   + +    + ++ +    IA F   L  + A
Sbjct: 218 VASNTVARADFTVVVYFTVLGLFFAYCYPIARFTRLLERRHA 259



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++  A+    +    ++   +   T+ G ++G   LS   +     R YV+VFRN P LV
Sbjct: 45  TWLPALGNAMLVNIGISALAIALGTLAGLVLGPLTLSRLGIARVAARAYVQVFRNAPLLV 104

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +I+F        +     S+  P   
Sbjct: 105 LIYFSTYVFPFEIRFGHASLPFPDWF 130


>gi|83746650|ref|ZP_00943699.1| Hypothetical Protein RRSL_03560 [Ralstonia solanacearum UW551]
 gi|207739615|ref|YP_002258008.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726603|gb|EAP73732.1| Hypothetical Protein RRSL_03560 [Ralstonia solanacearum UW551]
 gi|206592995|emb|CAQ59901.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 259

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 11/219 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             N  L    LT+         S   GI  +L   RL              L  +   + 
Sbjct: 18  FPNGPLGGAALTLWMALLACAASTAAGIAFALLLDRLDHLGTRAAAGLACALRGALATLR 77

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P L+L+   Y L            +      PE  ++  AL+   AA+IA+ +++GL 
Sbjct: 78  AVPVLMLMFWAYFLI----------PMALGVAVPETATVVTALATVGAAYIAQSMQAGLR 127

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ  AA+ALG++  +A   V+LPQA R ++P + +Q+++ +K++SLA  VG  +L 
Sbjct: 128 AVGTGQRNAALALGMSPGQALLAVVLPQAWRIMLPSVANQWVSTVKDTSLAYIVGVVELS 187

Query: 351 SVGGTIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +    + ++      E+      +Y  L   I L    L
Sbjct: 188 TAASQVNSRIVAYPAEVFAAVAVLYFVLCSGIELLPRWL 226


>gi|302059461|ref|ZP_07251002.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
          Length = 236

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+   R+SR+   +       
Sbjct: 6   QEYWKPFLYTDGVNITGLAMTMWLLSASIAIGFFVSIPLSIA--RVSRNRWVRWPVQF-- 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 62  ---YTYLFRGTPLYIQLLICYTGIYSIAAVREQPMLD-AFFRDAMNCTILAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  ITGLAMTMWLLSASIAIGFFVSIPLSIARVSRNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSIAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAI 125


>gi|300718193|ref|YP_003742996.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
 gi|299064029|emb|CAX61149.1| polar amino acid ABC transporter, inner membrane subunit [Erwinia
           billingiae Eb661]
          Length = 216

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 18/207 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + S VLG +        S        + +  LY+S  L+ G P +V + + +  
Sbjct: 25  LTALAALVSLVLGQIGCYLQLCRS-----WPPRLIGRLYVS--LMRGTPAIVQLFVVF-- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F            ++  +A+   + A++AEI+R     V RGQ+EAA  LG
Sbjct: 76  ---------FTLPLLGLGGQPLLAAVVAIGMNSGAYVAEILRVNRRLVSRGQLEAARTLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       ++ PQ MR+ +P L +++  LLK + LA  V   +L   G  +I ++ +A 
Sbjct: 127 LSRWLTWWYIINPQVMRASLPMLVNEFTILLKTTPLASVVALTELTYAGQIVIARSYEAT 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++L+    YL +++ +      L  +
Sbjct: 187 QVMLLVSLGYLLIALPLIRAARWLEQR 213


>gi|330428744|gb|AEC20078.1| amino-acid ABC transporter permease y4tG [Pusillimonas sp. T7-7]
          Length = 230

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 97/217 (44%), Gaps = 14/217 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +    +  V  F +  VL L    L +    +       L      I   P L
Sbjct: 20  LPILLKGLVVTIQATVLGFAVAAVLGLVLAAL-KSSRLRIISWPARLITEF--IRDTPLL 76

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y +                 V P F++  +AL    +A+ +E+ R+G+ ++ RG
Sbjct: 77  VQLFFLYYV-----------LPEYGIVLPAFLTGALALGIQYSAYTSEVYRAGIESITRG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA AL L+  +   ++++PQA+  IIP L +  ++++K+  +   V   ++++V   
Sbjct: 126 QTEAACALDLSPLRTFSVIIVPQAIPRIIPALGNYLVSIMKDVPVLSVVSVLEMLNVAKI 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I ++T   +  + +   +YL L+++ +  +  L+ ++
Sbjct: 186 IGDRTFNYLIPLSMVGGLYLILTLVASAAVRHLDQRL 222



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 77  VPYTSDSSYATA------ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           + + + S++  A      +L G V T      G   A ++G ++ A + S  ++++W  R
Sbjct: 5   IEWDTTSNWLFATSILPILLKGLVVTIQATVLGFAVAAVLGLVLAALKSSRLRIISWPAR 64

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLP 157
           +  E  R+ P LV +FFLY  +     
Sbjct: 65  LITEFIRDTPLLVQLFFLYYVLPEYGI 91


>gi|49082028|gb|AAT50414.1| PA2203 [synthetic construct]
          Length = 239

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYIST 226
              L    LT+       + + ++G  L++      R        +    +  PLL    
Sbjct: 12  RWLLDGFLLTLGLALLSCLLATLIGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLF 71

Query: 227 FLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F  FG+P L+  AL   L+   + P+L   +F        EF++    L+ YT+AF+AE 
Sbjct: 72  FWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAGAWGLTLYTSAFVAEE 123

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ +V   Q  A +ALGLT R+  R+V+LPQA+R+ +PPL  QY+N LKNSSLA+A+
Sbjct: 124 FRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKNSSLAMAI 183

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G A+L      +  +T +  +   I   +Y+    +I  F   L  
Sbjct: 184 GLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQQ 229



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 53/112 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L GF+ T  LA    + AT+IG  +   RLS  +L++W  R Y+ +FRN P LV
Sbjct: 9   QYLRWLLDGFLLTLGLALLSCLLATLIGAPLAIARLSRRRLLSWPARAYLALFRNTPLLV 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            +FF Y  V ++LP    S +            SF  L       ++  +FV
Sbjct: 69  QLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSFEFLAGAWGLTLYTSAFV 120


>gi|300741912|ref|ZP_07071933.1| glutamate transport system permease protein GluD [Rothia
           dentocariosa M567]
 gi|300381097|gb|EFJ77659.1| glutamate transport system permease protein GluD [Rothia
           dentocariosa M567]
          Length = 311

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NI  ++V       VLSV+          +      +      +    +        V+ 
Sbjct: 31  NIAAILVFIAFAVYVLSVMGAKGQLEAEKWTDLFTAKAWGSYYMPGLVSTLQAAGISVIT 90

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            +       ++R    +  +    + +  F        VL+ + +   F    L +F++I
Sbjct: 91  SIAFGVVFGMARLAQNRVLRWFGTIVVEFFRAVP----VLMMMIFFWLF----LSRFSWI 142

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             S +   F+++ I L+ Y  + IAE++RSG+  +PRGQ EA +A+GLT  +  R +L+P
Sbjct: 143 NPSQL--PFLAVVIGLTFYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPGQTLRTILMP 200

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA  S++P + SQ++ +LK+++L   + + +L++    I +  G  ++ +L+   +++ +
Sbjct: 201 QAFNSMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQTLLLAAALFVIV 260

Query: 378 SIMIALFMNRLNAKIALK 395
           +  +      L++ +A +
Sbjct: 261 NFALTALATWLSSFLASR 278



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 48/128 (37%), Gaps = 17/128 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            +       I   L+     ++ ++ +    +                    +      +
Sbjct: 23  AKARTRVFNIAAILVFIAFAVYVLSVMGAKGQLE-----------------AEKWTDLFT 65

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++ +  + G V+T   A   +I +   G + G  RL+ N+++ W   + VE FR +P 
Sbjct: 66  AKAWGSYYMPGLVSTLQAAGISVITSIAFGVVFGMARLAQNRVLRWFGTIVVEFFRAVPV 125

Query: 142 LVVIFFLY 149
           L+++ F +
Sbjct: 126 LMMMIFFW 133


>gi|295699404|ref|YP_003607297.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438617|gb|ADG17786.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 257

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 70/130 (53%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               E  +  +A+S    A+  EIVR+G+ ++ RGQ++AA ALGL  R+  R V+LPQA+
Sbjct: 85  IHIDEVQAAILAMSVNLGAYATEIVRAGIDSISRGQVQAAQALGLQGRQVFRYVVLPQAL 144

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            ++ P L  Q L ++  S++   +   DL      I ++  ++ E  +I    YL +SI+
Sbjct: 145 ANVFPALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITATYLLMSIV 204

Query: 381 IALFMNRLNA 390
           +   +NR   
Sbjct: 205 LRQLLNRFGR 214


>gi|170735290|ref|YP_001774404.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169821328|gb|ACA95909.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 231

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/234 (22%), Positives = 106/234 (45%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + L  +        +    ++ V S      L++    ++R    +       L++
Sbjct: 1   MNDFLSLIAQSGPDVARGVWITLQLLVLSCTFAFALAVPL-AVARTSERRWLSVPSRLFM 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAF 280
           S F   G P LV I + Y        L QF+ +  S +       F     AL+   AA+
Sbjct: 60  SVF--RGTPLLVQIFVLYY------GLAQFSIVRASPLWLLVGGSFSCALCALTLNLAAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE +R G+  VP G+ EAA+A G++    T  V++P+A+  + P L ++ +  LK+++L
Sbjct: 112 MAEDIRGGIAGVPAGEKEAALAFGMSRFMLTWFVVVPRAIGIVAPTLGNEIVLQLKSTAL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +   DL  V   I  +T    + +++   +Y+ ++ +++  + R+  ++  
Sbjct: 172 ASTITVLDLTGVARRISIETY-TTDALMLAGIVYVGITAVLSTVLKRVEGRLNR 224



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 30/77 (38%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L       A  +   +   R S  + ++   R+++ VFR  P LV IF LY  
Sbjct: 18  GVWITLQLLVLSCTFAFALAVPLAVARTSERRWLSVPSRLFMSVFRGTPLLVQIFVLYYG 77

Query: 152 VLSVLPIPDHSIVLPFG 168
           +     +    + L  G
Sbjct: 78  LAQFSIVRASPLWLLVG 94


>gi|89072895|ref|ZP_01159452.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
 gi|89051417|gb|EAR56872.1| putative amino acid ABC transporter, permease protein
           [Photobacterium sp. SKA34]
          Length = 311

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 112/231 (48%), Gaps = 10/231 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYI 224
                      T+  +    +F+ + G++L+L         RL  + + +  + +P L  
Sbjct: 74  EMPYFFQGVFSTIRISLWGMLFAAIFGLLLALARRSPLLFLRLPANAYIQLVRNIPPLVF 133

Query: 225 STFLIFGLPTLVLIALK----YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
                F + + ++  L     ++ +  +  + Q    G S +     S  + +    AA+
Sbjct: 134 VFIFYFFISSQLVPLLGLNDLFRFYNGQENVLQSFLFGSSRLWENLFSGILCVGLIAAAY 193

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE++R+GL ++ +GQ EAA +LGL+     R V+ PQA+  I+P L  Q+++++K+SS+
Sbjct: 194 IAEVIRAGLDSIDKGQWEAADSLGLSKLDRFRFVIFPQAIAGIVPALAGQFISIVKDSSI 253

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +   ++  VG  + N +G   EI L+   +YL L + ++L  N+L  +
Sbjct: 254 ISLISIQEITFVGSEMANSSGLIFEIWLLVGAVYLILCLSLSLLFNKLEKR 304



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 9/157 (5%)

Query: 62  GFLSERAGFEIDQGI-------VPYTSDSSY-ATAILVGFVNTFWLAFSGMIPATIIGTL 113
           G+L  R+   I           + ++S  +        G  +T  ++  GM+ A I G L
Sbjct: 43  GWLYYRSSIGIHYHWQWQEAFDLIFSSSQNNEMPYFFQGVFSTIRISLWGMLFAAIFGLL 102

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPL-VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +   R S    +      Y+++ RNIPPL  V  F +     ++P+   + +  F     
Sbjct: 103 LALARRSPLLFLRLPANAYIQLVRNIPPLVFVFIFYFFISSQLVPLLGLNDLFRFYNGQE 162

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
           N   SF   +      +F     +G++ + +   + R
Sbjct: 163 NVLQSFLFGSSRLWENLFSGILCVGLIAAAYIAEVIR 199


>gi|257139193|ref|ZP_05587455.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 262

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 22/199 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V    LG+ L+L    L        G                  + ++ L +  +F  PV
Sbjct: 57  VLGVALGVALALATGALRGALIVVIG--------------FFRAIPVLMLIFWTYFLLPV 102

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   +        P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT R+ 
Sbjct: 103 LLHADV-------PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRRQT 155

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            R VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+      +I L 
Sbjct: 156 VRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNRLMVYPAQIFLF 215

Query: 370 WMFIYLSLSIMIALFMNRL 388
              IYL L   + +    L
Sbjct: 216 VGVIYLILCTALDVAATWL 234


>gi|227487310|ref|ZP_03917626.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227092736|gb|EEI28048.1| glutamate ABC superfamily ATP binding cassette transporter,
           permease protein [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 312

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 110/260 (42%), Gaps = 10/260 (3%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I   V+   +   VL VL          +  FL +   +   L             ++  
Sbjct: 25  IATFVIAIAVIAWVLKVLGDNGQLAAEKWTPFLKSTTWTTYILPGLWGTLKAALVSIILA 84

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           ++      + R    K  +    + +  F    +P L+L+   Y +     ++       
Sbjct: 85  IIIGALLGVGRLSKNKAIRWFCGIIVEFF--RAIPVLILMIFAYSVFATYAIVPSAQL-- 140

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                  F  +   L+ Y  + IAE +R+G++++P GQ EAA ALGL+HR+    +LLPQ
Sbjct: 141 ------GFAGVVFGLTMYNGSVIAETLRAGILSLPTGQSEAAEALGLSHRQTIWNILLPQ 194

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ +++P L SQ +  LK+++L   + + ++V  G    +     +  +++   I ++++
Sbjct: 195 AVATMLPALISQLVIALKDTALGYMILYVEVVRSGLMSASYYRNYLPALVVVAIIMIAIN 254

Query: 379 IMIALFMNRLNAKIALKEKK 398
             ++    R+  ++     +
Sbjct: 255 FGLSRLAERIERQLRAGRAR 274



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 22/161 (13%)

Query: 15  RMKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAG 69
           R   LYD      R  N  V I   ++   +  W +  + +N + +              
Sbjct: 4   RATVLYDAPGPKARQFNRIVTIATFVIAIAVIAWVLKVLGDNGQLA-------------- 49

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
               +   P+   +++ T IL G   T   A   +I A IIG L+G GRLS NK + W C
Sbjct: 50  ---AEKWTPFLKSTTWTTYILPGLWGTLKAALVSIILAIIIGALLGVGRLSKNKAIRWFC 106

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            + VE FR IP L+++ F Y    +   +P   +     +F
Sbjct: 107 GIIVEFFRAIPVLILMIFAYSVFATYAIVPSAQLGFAGVVF 147


>gi|254391812|ref|ZP_05007007.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197705494|gb|EDY51306.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
          Length = 302

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 17/267 (6%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V     +  +        +    L     S  +          L     T+       + 
Sbjct: 32  VGFLAVLAVVAWWVLGVMAERDQLASEKWSPFVTDAKVWTTFLLPGLGETLKAAGISMLI 91

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +  LG  L +   RLS H   +    +P+  +  F    +P L+L+   YQ         
Sbjct: 92  ALPLGAALGI--GRLSDHAWVR----IPVGAVVEF-FRAIPVLLLMVFAYQAFVQ----- 139

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F    +      ++   L  Y A+ IAEIVR+G++++P GQ +AA A+G+   +A  
Sbjct: 140 ---FTTIESDFRPMYAVITGLVLYNASVIAEIVRAGILSLPNGQTDAAKAIGMRKGQAMA 196

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIW 370
            VLLPQA+ +++P L SQ + ++K+++L    +GF++L+     I    G   I  + + 
Sbjct: 197 HVLLPQAVTAMLPALVSQLVVIVKDTALGGALLGFSELLYQNRAITANYGANTIAALTVI 256

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             I++ ++  +  F + L  +I   +K
Sbjct: 257 ALIFILVNFALTSFASWLEGRIRRGKK 283



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 21/145 (14%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  NI   +    +L V+  W +                G ++ER   
Sbjct: 12  TSVLYDAPGPRAKRRNILYTVGFLAVLAVVAWWVL----------------GVMAERDQL 55

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
             ++     T    + T +L G   T   A   M+ A  +G  +G GRLS +  V     
Sbjct: 56  ASEKWSPFVTDAKVWTTFLLPGLGETLKAAGISMLIALPLGAALGIGRLSDHAWVRIPVG 115

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSV 155
             VE FR IP L+++ F Y++ +  
Sbjct: 116 AVVEFFRAIPVLLLMVFAYQAFVQF 140


>gi|53719420|ref|YP_108406.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|121598906|ref|YP_992992.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|254178126|ref|ZP_04884781.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia mallei ATCC 10399]
 gi|52209834|emb|CAH35806.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|121227716|gb|ABM50234.1| ABC transporter, permease protein [Burkholderia mallei SAVP1]
 gi|160699165|gb|EDP89135.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia mallei ATCC 10399]
          Length = 247

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 63  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A +ALGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 116 HAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 175

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 176 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 212


>gi|227542732|ref|ZP_03972781.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227181498|gb|EEI62470.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 226

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 8/228 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              L    L    +T+       + +F+LG++L+       R       + +   YI T 
Sbjct: 5   WADLWPGLLGAFWVTIKLTFFSAIGAFILGVILTAM-----RVSPVAILRGIARFYIET- 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +   P  ++I       +    L           +  F    +A   YT+ F+AE +RS
Sbjct: 59  -VRNTPLTLIILFCSIGLYQNLGLTLAPENDNFIKNNNFWLAVLAFVLYTSTFVAESLRS 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V  GQ EAA +LGL+  +  R V+ PQA +S + PL +  + L KN+++A  +G A
Sbjct: 118 GINTVHFGQAEAARSLGLSFTQTFRFVVFPQAFKSAVVPLGNTLIALTKNTTIASVIGVA 177

Query: 348 DLVSVGG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   +   TI N     I + +I+   ++ +++ + L   R   + A+
Sbjct: 178 EASLLMKSTIENHANHTILVFMIFALGFIIITLPMGLLFTRYTRRKAV 225



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 35/82 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L  F  T  L F   I A I+G ++ A R+S   ++  I R Y+E  RN P  ++I
Sbjct: 9   WPGLLGAFWVTIKLTFFSAIGAFILGVILTAMRVSPVAILRGIARFYIETVRNTPLTLII 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPF 167
            F    +   L +        F
Sbjct: 69  LFCSIGLYQNLGLTLAPENDNF 90


>gi|121601743|ref|YP_988905.1| amino acid ABC transporter, permease protein [Bartonella
           bacilliformis KC583]
 gi|120613920|gb|ABM44521.1| amino acid ABC transporter, permease protein [Bartonella
           bacilliformis KC583]
          Length = 240

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 12/188 (6%)

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +   ++         + LP L I   +  GL +L+   L Y              I  + 
Sbjct: 52  IRIAKIIATSFSAIFRGLPELLILFLVYHGLQSLIQTVLDY------------LKIEMTF 99

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F++  +ALS   AAF  EI  S L    +GQ EAA ALG +       ++ PQ +R
Sbjct: 100 SINAFIASVLALSMVFAAFSCEIWISALKVFNKGQYEAAKALGFSSSTTFFRIVFPQLIR 159

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           + +P L++ +L LLK++SL   +   DL+      ++ TG+ +   L+   +YL  S   
Sbjct: 160 NALPGLSNNWLTLLKDTSLVSTISLVDLMRQTNLAVSATGKPMLFYLVACLLYLLFSAFS 219

Query: 382 ALFMNRLN 389
           +L +  L 
Sbjct: 220 SLILRYLE 227


>gi|300694623|ref|YP_003750596.1| amino-acid ABC transporter protein [Ralstonia solanacearum PSI07]
 gi|299076660|emb|CBJ35998.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           PSI07]
          Length = 230

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 13/210 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   +F LG+VLS+     +R    +  + + + ++S   I G P L+ + L Y +
Sbjct: 28  VAIGASACAFALGLVLSIVLL-WARLSRYRILRGMVMAWVSA--IRGTPALIHMLLAYYV 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L   +            +   AL+C T+A++ EI+R  L +VP  Q  AA ALG
Sbjct: 85  ---VPPLLGLSI-------SPLAAGIGALACNTSAYLVEILRGALSSVPDTQRAAAQALG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +   +  R VLLPQ     IPPLTS++  LLK SSL   +   +L +V      Q+   +
Sbjct: 135 MREPQVWRHVLLPQVFYRAIPPLTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPL 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++  +   +Y  +   ++        +++ 
Sbjct: 195 QVFAMTAAVYFVILSCVSAASRVCERRVSW 224


>gi|298291389|ref|YP_003693328.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296927900|gb|ADH88709.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 458

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 105/258 (40%), Gaps = 18/258 (6%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FAT 205
            ++          +  L    +  + GL +          + +   V GIV SL    A 
Sbjct: 211 GRAAARATMWVFLAFGLLVLAWDIDFGLPYVETRQWGGLLVTLVIAVTGIVASLPLGIAL 270

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L R       + L +++I  +    L T VL    Y L    P           +    
Sbjct: 271 ALGRRSQMPIVRLLSVVFIEFWRGVPLIT-VLFFATYMLPLFLPQ---------GSNPDG 320

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   + ++ ++AA++AE++R GL A+P+GQ E A+A+GLT  +  RL++LPQA+  +IP
Sbjct: 321 LLRALVGVALFSAAYMAEVIRGGLQAIPKGQYEGAMAVGLTWSQMMRLIILPQALTLVIP 380

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIM 380
            + + +++L K+++L + V   D +            A  +           +Y      
Sbjct: 381 GIVNSFISLFKDTTLVLIVSIFDFLGQLRASFTDPNWASPVTLYTGFAFAGVVYFLFCFG 440

Query: 381 IALFMNRLNAKIALKEKK 398
           ++ +   +  ++    + 
Sbjct: 441 MSRYSLFVERRLNTSHRH 458



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 90/255 (35%), Gaps = 14/255 (5%)

Query: 31  IILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSE---RAGFEIDQGIVPYTSDSSYAT 87
           I+ AL++       +  +  +   +  +    FL+       ++ID G+ PY     +  
Sbjct: 190 ILTALVVMAAIGGVIRLIGGDGRAAARATMWVFLAFGLLVLAWDIDFGL-PYVETRQWG- 247

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
               G + T  +A +G++ +  +G  +  GR S   +V  +  V++E +R +P + V+FF
Sbjct: 248 ----GLLVTLVIAVTGIVASLPLGIALALGRRSQMPIVRLLSVVFIEFWRGVPLITVLFF 303

Query: 148 LYKSVLSVLPIPDHS----IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
               +   LP   +       L      +   ++              +   + + L+  
Sbjct: 304 ATYMLPLFLPQGSNPDGLLRALVGVALFSAAYMAEVIRGGLQAIPKGQYEGAMAVGLTWS 363

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV 262
                    +     +P +  S   +F   TLVLI   +  L   +      N+    T+
Sbjct: 364 QMMRLIILPQALTLVIPGIVNSFISLFKDTTLVLIVSIFDFLGQLRASFTDPNWASPVTL 423

Query: 263 SPEFMSLYIALSCYT 277
              F    +    + 
Sbjct: 424 YTGFAFAGVVYFLFC 438


>gi|313115584|ref|ZP_07801043.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622099|gb|EFQ05595.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 224

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 22/210 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   + S  LGI+L +              KA+  LY+    I        + L + ++F
Sbjct: 30  AVSVIISLPLGILLGVLM-----TSRNPVIKAVLRLYLEFVRIMP-----QMVLLFLVYF 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  +N  G         +  I    +  A ++++VR  LIA+P+ Q E+A ALG++
Sbjct: 80  GTTRAFGWNLSGE-------TASIIVFVLWGTAEMSDLVRGALIAIPKHQYESAEALGMS 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----G 361
             +    +++PQ +R +IP   +    ++K +SL + +G  +++ V   II         
Sbjct: 133 RAQTYWYIIIPQTVRRLIPLSINLITRMIKTTSLVLMIGVVEVIKVAQQIIEANRTASPN 192

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            A  I L    +Y  +   I+L  + L  K
Sbjct: 193 AAFGIYLTVFVLYFFVCWPISLLASYLEKK 222



 Score = 39.5 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G      ++   +I +  +G L+G    S N ++  + R+Y+E  R +P +V++F +
Sbjct: 18  LLGGLGVALKISAVSVIISLPLGILLGVLMTSRNPVIKAVLRLYLEFVRIMPQMVLLFLV 77

Query: 149 YKSVLSVLPI 158
           Y         
Sbjct: 78  YFGTTRAFGW 87


>gi|28869818|ref|NP_792437.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853063|gb|AAO56132.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|331014463|gb|EGH94519.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 262

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 11/211 (5%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           N  I + +  LG V  L    L      +  +    L++  F          + L Y   
Sbjct: 58  NILISLVAIGLGSVFGLLVGALG-LSPFRLLRLPARLWVQVFRNAP-----WLVLIYFTT 111

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P   +    G     P+++ + + L+   +A +AEI R  + ++P  Q EAA +L  
Sbjct: 112 YVFPF--EIKIAGTYIAFPDWVKVTLGLALPASANVAEIFRGAVASIPSTQWEAARSLAF 169

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQ 362
           T  +  R ++LPQ  + ++PP  + Y  +   ++LA  VG  D++         +NQTG 
Sbjct: 170 TRGQIFRSIILPQCFKRMLPPWMNLYAVITMGTALASLVGVHDVIDTAQIASNTVNQTGF 229

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + I    + ++ +    I+   + L  + A
Sbjct: 230 TVVIYCSLLVLFFAYCYPISRLTHYLERRYA 260



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 53/117 (45%)

Query: 53  EKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112
            +  +++ +  L   A F    G   + +   ++ A+  GF     ++   +   ++ G 
Sbjct: 15  RRRLVTVSLAVLLVSALFYWASGRPIFNALVQWSPALAGGFAQNILISLVAIGLGSVFGL 74

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           LVGA  LS  +L+    R++V+VFRN P LV+I+F        + I    I  P  +
Sbjct: 75  LVGALGLSPFRLLRLPARLWVQVFRNAPWLVLIYFTTYVFPFEIKIAGTYIAFPDWV 131


>gi|291616414|ref|YP_003519156.1| YckJ [Pantoea ananatis LMG 20103]
 gi|291151444|gb|ADD76028.1| YckJ [Pantoea ananatis LMG 20103]
 gi|327392854|dbj|BAK10276.1| probable amino-acid ABC transporter permease protein YckJ [Pantoea
           ananatis AJ13355]
          Length = 221

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 14/219 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + V G+ + +    L         +   L  +   LI   
Sbjct: 11  WPYWPELLSGLWVTIQLTVLATVGGVSIGIIGAALRSGKPSWLSR---LWGLYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPNLGLKLTAGE--------AALLAMLVNLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT  +    V+LP +++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAGRVLGLTRSQTFLRVVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I ++T  + E+  +   IYL+LSI++   +  +  K
Sbjct: 177 ANLIQSRTFLSFEVYSVTTLIYLALSIVMRQLLLAIGRK 215



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G   T  L     +    IG +  A R      ++ +  +YVE+ 
Sbjct: 5   LNFPALWPYWPELLSGLWVTIQLTVLATVGGVSIGIIGAALRSGKPSWLSRLWGLYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKLTAGEAALLAMLVN 100


>gi|125718886|ref|YP_001036019.1| ABC-type arginine/histidine transporter, permease protein, putative
           [Streptococcus sanguinis SK36]
 gi|125498803|gb|ABN45469.1| ABC-type arginine/histidine transporter, permease protein, putative
           [Streptococcus sanguinis SK36]
 gi|325688945|gb|EGD30953.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 230

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 101/194 (52%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             ++   E++   L   YI  F++   P +VL+ L +   +  P   ++           
Sbjct: 42  AWAQIAEEQSFAGLARGYI--FILRCTPPIVLLFLVF---YGIPEFLEWWLGLDINNWSR 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I +    AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P
Sbjct: 97  TVFVIITMILLFAAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            LT+ +LNL+++++LA  +G  D++  G  +I++     ++E       IY  ++++++L
Sbjct: 157 NLTTSFLNLMRDAALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSL 216

Query: 384 FMNRLNAKIALKEK 397
               L   + +KE+
Sbjct: 217 ASQLLEKSLTVKER 230


>gi|220929053|ref|YP_002505962.1| polar amino acid ABC transporter inner membrane subunit
           [Clostridium cellulolyticum H10]
 gi|219999381|gb|ACL75982.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulolyticum H10]
          Length = 227

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 18/228 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L    + +          F+LG+ L+L           +  K + +  I T +I 
Sbjct: 17  FPQGPLGGLAINVFLAVITMASGFILGLFLAL----------GRISKNIVIRRIVTCVIE 66

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L L+ + +  +F  P+L            P  +S Y++L+ Y+A   AEI R GL 
Sbjct: 67  ITRALPLLLIVFWFYFFIPLLAG-------RPLPILLSAYLSLTFYSAVNQAEIFRGGLT 119

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++ +GQ + A   GL+H +    ++LPQ +R ++P      ++L K++S+   +G  DL 
Sbjct: 120 SIDKGQWQVASCTGLSHYQCMTYIILPQVLRMMLPSFVGFLISLFKDTSVIYIIGIIDLT 179

Query: 351 SVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  +  +   + I   ++   +Y  L  +++ F  +  +K A   K
Sbjct: 180 QIGIMLSQREPDKLIFSYILVAMLYFILCFILSHFAKKWESKQARWSK 227



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G     +LA   M    I+G  +  GR+S N ++  I    +E+ R +P L+++F+ Y
Sbjct: 22  LGGLAINVFLAVITMASGFILGLFLALGRISKNIVIRRIVTCVIEITRALPLLLIVFWFY 81

Query: 150 KSVLSVLPIP 159
             +  +   P
Sbjct: 82  FFIPLLAGRP 91


>gi|226944245|ref|YP_002799318.1| polar amino acid ABC transporter inner membrane permease
           [Azotobacter vinelandii DJ]
 gi|226719172|gb|ACO78343.1| polar amino acid ABC transporter, inner membrane permease component
           [Azotobacter vinelandii DJ]
          Length = 264

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 87/226 (38%), Gaps = 11/226 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                        N  I + +  LG +L L    +               ++        
Sbjct: 47  WEWSPALLKGFALNILISLLAIGLGTLLGL---AIGALNLSPLRLLRLPGWLWVQAFRNA 103

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVLI     +        +    G     P+++ + + L+   +A +AE+ R  + ++
Sbjct: 104 PLLVLIYFTTYVF-----PFEIRVAGHYLPFPDWLKVTLGLALPASANVAEVFRGAVASI 158

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  Q EAA +LG    +  R ++LPQ  + ++PP  + Y  +   ++LA  VG  DL+  
Sbjct: 159 PATQWEAARSLGFGRGQILRAIILPQCCKRMLPPWMNLYAVITMGTALASLVGVHDLIDT 218

Query: 353 GGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                  +N+ G  + I    + ++ +    I+ F   L  + A +
Sbjct: 219 AQIATNTVNRVGFTVLIYASVLGLFFAYCYPISRFTRYLERRHAFQ 264



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 43/91 (47%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     ++ A+L GF     ++   +   T++G  +GA  LS  +L+     ++V+ FRN
Sbjct: 43  FAPLWEWSPALLKGFALNILISLLAIGLGTLLGLAIGALNLSPLRLLRLPGWLWVQAFRN 102

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            P LV+I+F        + +  H +  P  +
Sbjct: 103 APLLVLIYFTTYVFPFEIRVAGHYLPFPDWL 133


>gi|320095231|ref|ZP_08026931.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977835|gb|EFW09478.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 225

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 92/211 (43%), Gaps = 22/211 (10%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +A     S VLG+ + L              +  PL ++    +  +  +  I L +  
Sbjct: 28  VSAVSVALSLVLGVGVGLAMRS----------RLAPLRWLMRAYLEFVRIMPQIVLLFLA 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F    L   N  G         +  +  + + AA + ++VR  LI++PR Q E+A ALG
Sbjct: 78  YFGLTRLTGVNLDG-------ITASVLVFTLWGAAEMGDLVRGALISIPRHQYESAEALG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--- 361
           L  R+A R V+LPQ +R + PP  +    ++K +SL V +G  +++ VG  II+      
Sbjct: 131 LDARQAMRFVILPQTVRRLAPPAVNLVTRMVKTTSLVVLIGVVEVLKVGQQIIDANRFEY 190

Query: 362 --QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              A+ +  +    Y  +   I+L    L  
Sbjct: 191 PTAALWVYGVVFVAYFLVCWPISLLSRHLEK 221



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   +  + ++G  VG    S    + W+ R Y+E  R +P +V++F  
Sbjct: 18  ILEGLAVTLGVSAVSVALSLVLGVGVGLAMRSRLAPLRWLMRAYLEFVRIMPQIVLLFLA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  +  +    I     +F   
Sbjct: 78  YFGLTRLTGVNLDGITASVLVFTLW 102


>gi|218671002|ref|ZP_03520673.1| polar amino acid ABC transporter permease [Rhizobium etli GR56]
          Length = 255

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 7/238 (2%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
            P  + +  +      R +    +T++ +      S ++GI+ +      S        +
Sbjct: 23  HPKWNFIFFYEPSQWARFVGGLAVTVELSVACVALSLIIGILGAWAQGAPS-----PFVR 77

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            L   YI  F     P + L+   + L    P +   +      V        ++LS + 
Sbjct: 78  CLTQGYIQVFR-NTPPMIQLLFFYFALGQFTPTITGTDGWTEEPVISNIGWAIVSLSFFA 136

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            AF  EI R+G+ A+P+   EA  ALG+   +    V+LP A+R  +P L +  +NL+K 
Sbjct: 137 GAFNIEIFRAGIEAIPQTTKEACEALGMNRLQTYAYVVLPLALRVSLPALNNNLVNLVKT 196

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI-YLSLSIMIALFMNRLNAKIAL 394
           ++ A+A+   +L+    +I N    A    +  +F+ Y+ L   +AL MNR    + +
Sbjct: 197 TTQAIAIAVPELLYQMVSIWNDYASAQNAAMTVLFVSYILLVGALALAMNRWERALRI 254



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 1/126 (0%)

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
            F  E A        + +   S +A   + G   T  L+ + +  + IIG L    + + 
Sbjct: 14  SFFRELAQTHPKWNFIFFYEPSQWAR-FVGGLAVTVELSVACVALSLIIGILGAWAQGAP 72

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
           +  V  + + Y++VFRN PP++ + F Y ++    P    +        ++N G +  +L
Sbjct: 73  SPFVRCLTQGYIQVFRNTPPMIQLLFFYFALGQFTPTITGTDGWTEEPVISNIGWAIVSL 132

Query: 182 TMDTNA 187
           +    A
Sbjct: 133 SFFAGA 138


>gi|170696518|ref|ZP_02887642.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170138565|gb|EDT06769.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 248

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 14/206 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S +LG ++ +    ++     K  + +   Y+   LI   P +V +   +  
Sbjct: 23  VTLGLTAISTLLGALVGIAGASVA-VAGPKWARWVVASYVE--LIRNTPFIVQLFFVF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F          E  +  +A++    A+  EIVR+G+ ++ RGQ++AA ALG
Sbjct: 78  ---------FGLPTLGIHIDEMQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+  R ++LPQA+ ++ P L SQ L ++  S++   +   DL      + ++  ++ 
Sbjct: 129 LHGRQVFRYIVLPQALANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFVQSRNFRSF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
           E  LI    YL LSI++   +NR   
Sbjct: 189 ESYLIITATYLLLSIVLRQIINRFGR 214



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 39/95 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA  +  G   T  L     +   ++G    +  ++  K   W+   YVE+ R
Sbjct: 6   DFSGFGLYAGMLARGVAVTLGLTAISTLLGALVGIAGASVAVAGPKWARWVVASYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P +V +FF++  + ++    D        M +N
Sbjct: 66  NTPFIVQLFFVFFGLPTLGIHIDEMQAAILAMTVN 100


>gi|317507275|ref|ZP_07965019.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Segniliparus
           rugosus ATCC BAA-974]
 gi|316254426|gb|EFV13752.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Segniliparus
           rugosus ATCC BAA-974]
          Length = 291

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 11/191 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R SR       +AL   Y+  F   GLP L++I L   L F  P L     + G      
Sbjct: 106 RTSRGPVLFPLRALATGYVDLF--RGLPVLLVIFL---LGFGAPALR----LKGLPKEAL 156

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F     AL    +A++AE+ R+G+ +VP+ Q  AA ALGL      R V+LPQA+R++ P
Sbjct: 157 FWGAA-ALVLTYSAYVAEVFRAGVESVPQTQRLAARALGLRGGATMRFVVLPQAIRAVAP 215

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L +  ++L K+S L   +G  D +                 ++   ++++L+I +A F 
Sbjct: 216 ALLNDLVSLQKDSGLIAVLGVVDAIRAAQIQTASDFN-FTPYVVAGALFVALTIPLARFT 274

Query: 386 NRLNAKIALKE 396
           +    + +  E
Sbjct: 275 DWYARRKSWHE 285


>gi|254500256|ref|ZP_05112407.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222436327|gb|EEE43006.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 241

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 3/137 (2%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +     + +  +AL+ YT+A+++E+ R  + +VP GQ E   ALGL   +   L++LPQA
Sbjct: 93  AIQVDPWFAAGLALTLYTSAYLSEVWRGAITSVPLGQHEGGRALGLAFAQIMILIILPQA 152

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLS 376
            R  I P     + ++K +SLA  +GF DL+++G    N      Q   I  +   IY S
Sbjct: 153 FRLAIAPTVGFMVQIIKGTSLAYIIGFHDLMAIGKRWANSPVPGTQPFVIYPMMAMIYFS 212

Query: 377 LSIMIALFMNRLNAKIA 393
           L   ++L+   L  ++ 
Sbjct: 213 LCYPLSLWARHLEKRLG 229


>gi|296129395|ref|YP_003636645.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
 gi|296021210|gb|ADG74446.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
          Length = 292

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 6/228 (2%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                     + +      + A ++    VLG+  +L A  ++       G  L +   +
Sbjct: 45  RGVFDPERWAVLWDPPKNQSAADVWRSLLVLGLGATLRAAAVAAPLAFVLGLLLAVWRTT 104

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F         +I    +L    PVL    F         F ++   L+ Y  A IAEIV
Sbjct: 105 RFTAARGVASAII----ELFRGLPVLLMMFFALLGFGWSAFAAVVFGLTVYNMAIIAEIV 160

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL ++P+GQ EAA A+GL+  +  RLVLLPQA+R++ P L +Q + LLK+SSL   VG
Sbjct: 161 RAGLASLPKGQSEAAYAVGLSRGQTLRLVLLPQALRTMAPSLVAQLVVLLKDSSLGFIVG 220

Query: 346 FADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +A+L++         G    + +  +    YL ++I ++    RL  +
Sbjct: 221 YAELLNAIKNNAQYFGNTSVVALFAVGAGTYLVVNIALSRLAMRLQGR 268



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 32/73 (43%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           ++   + + +++G   T   A      A ++G L+   R +       +    +E+FR +
Sbjct: 64  SAADVWRSLLVLGLGATLRAAAVAAPLAFVLGLLLAVWRTTRFTAARGVASAIIELFRGL 123

Query: 140 PPLVVIFFLYKSV 152
           P L+++FF     
Sbjct: 124 PVLLMMFFALLGF 136


>gi|78213329|ref|YP_382108.1| amino acid ABC transporter permease [Synechococcus sp. CC9605]
 gi|78197788|gb|ABB35553.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. CC9605]
          Length = 296

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 81/236 (34%), Positives = 115/236 (48%), Gaps = 13/236 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P              ++  L   T+    + K+     VL  VL 
Sbjct: 31  LIRTGLGLGFGWLGRPAGFALAETALPYAPSDSYLWALTIGWLNSLKVIAAGLVLATVLG 90

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIG-- 258
           + A   +R    +  ++L   Y+   LI  +P L+ +   Y + F   P +     I   
Sbjct: 91  VAAGA-ARSSSNRHLRSLGGGYV--ALIRQVPLLLQLLFWYFVAFLGLPSVPVGGLIRLS 147

Query: 259 -------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  G  +S EF ++ + L+ +T A IAEIVR G+ AVPRGQ EA  +LGL      
Sbjct: 148 NQGIQLLGLNLSVEFCAVLVGLTVFTGASIAEIVRGGINAVPRGQWEAFRSLGLGEGLGV 207

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG AIE  
Sbjct: 208 RRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGHAIEGF 263



 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 74/138 (53%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R   + VQ+ +A +L  +    +NN+  N+ ++ L LG G+L   AGF + +  +PY   
Sbjct: 2   RQRRLLVQVGVAAVLIGLLALLINNLAVNLIRTGLGLGFGWLGRPAGFALAETALPYAPS 61

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SY  A+ +G++N+  +  +G++ AT++G   GA R S+N+ +  +   YV + R +P L
Sbjct: 62  DSYLWALTIGWLNSLKVIAAGLVLATVLGVAAGAARSSSNRHLRSLGGGYVALIRQVPLL 121

Query: 143 VVIFFLYKSVLSVLPIPD 160
           + + F Y      LP   
Sbjct: 122 LQLLFWYFVAFLGLPSVP 139


>gi|22537108|ref|NP_687959.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|25010989|ref|NP_735384.1| hypothetical protein gbs0935 [Streptococcus agalactiae NEM316]
 gi|76787817|ref|YP_329663.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798873|ref|ZP_00781081.1| amino acid ABC transporter, permease protein SP1502 [Streptococcus
           agalactiae 18RS21]
 gi|77409385|ref|ZP_00786084.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77411031|ref|ZP_00787386.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77413253|ref|ZP_00789450.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|22533969|gb|AAM99831.1|AE014235_4 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|23095389|emb|CAD46594.1| unknown [Streptococcus agalactiae NEM316]
 gi|76562874|gb|ABA45458.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76585769|gb|EAO62319.1| amino acid ABC transporter, permease protein SP1502 [Streptococcus
           agalactiae 18RS21]
 gi|77160713|gb|EAO71827.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77162955|gb|EAO73911.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77171994|gb|EAO75164.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
          Length = 213

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 18/194 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     +   S  LGIV++          H K  + L   YI  +++ G P L
Sbjct: 12  LVGAQVTLQVFFIVICLSIPLGIVVAFLM-----KVHFKPLQWLLTTYI--WIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y                         +  IA +   AA+ AEI R G+ ++P+G
Sbjct: 65  LQLIFFYY-----------FLPSVGISFDRMPAAIIAFTMNYAAYFAEIFRGGIESIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +  +    ++LPQ  + ++P + ++ + L+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKFSKFQTVWYIVLPQVFKIVLPSVFNETITLVKDSSLVYILGVGDLLLESKT 173

Query: 356 IINQTGQAIEIILI 369
             N+      + + 
Sbjct: 174 AANRDATLAPMFIA 187



 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  + F  +  +  +G +V        K + W+   Y+ + R  P L+ + F 
Sbjct: 11  LLVGAQVTLQVFFIVICLSIPLGIVVAFLMKVHFKPLQWLLTTYIWIMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV    D          +N 
Sbjct: 71  YYFLPSVGISFDRMPAAIIAFTMNY 95


>gi|325520348|gb|EGC99484.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Burkholderia sp. TJI49]
          Length = 237

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 4/205 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S V G  L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIVAGFALAVPL-AIARASSNRWISGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A     AA+  EI    + A   G++EA +A G++
Sbjct: 84  SLQVVHNHVLLD-AFFRNAMNCTLLAFVLNEAAYATEIFAGAIKATAAGEIEAGLAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    ++LP A+R  +P  +++ + +L  ++LA      D++ +   + + T  + + 
Sbjct: 143 RFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTATVPDVLKITRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   IY ++   +     +L A+
Sbjct: 203 YGIAAVIYAAVVFALIWAFRKLEAR 227



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 67/218 (30%), Gaps = 7/218 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           I Q    Y     Y      G   T WL    ++    +   +   R S+N+ ++    +
Sbjct: 5   ISQYWQSYLYTDGYR---FSGLAITLWLLVVSIVAGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + +H ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHNHVLLDAFFRNAMNCTLLAFVLNEAAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G + +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATAAGEIEAGLAYGMSRFKLYTRIILPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            P + +      S     F +  IA   Y A   A I 
Sbjct: 182 VPDVLKITRDVNSATYMSFQAYGIAAVIYAAVVFALIW 219


>gi|253581220|ref|ZP_04858477.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847497|gb|EES75470.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39BFAA]
          Length = 225

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+       VFS +LG +L +       +   K  K +  +Y+    I      
Sbjct: 19  WQGLWVTIRIALISMVFSIILGFLLGMVM-----NIPNKIIKFICRIYLEIVRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         +  I  + +  A + ++VRS LI++P+ 
Sbjct: 70  -QLVLLFLVYFGAAKHLGMNLSGE-------TAAVIVFTFWGTAEMGDLVRSALISIPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q ++   LGL   +    ++LPQ +R ++P   +    ++K +SL   +G  +++ VG  
Sbjct: 122 QYDSGYGLGLNKWQVYLYIILPQTIRRLLPSAVNLLTRMIKTTSLVALIGVVEVLKVGKQ 181

Query: 356 IINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+ +       A+ +     F+Y  +    +     L  K A
Sbjct: 182 IIDASRYTNPTAALWVYGAVFFMYFIICFPFSRLSRVLEKKFA 224



 Score = 43.0 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  +A   M+ + I+G L+G      NK++ +ICR+Y+E+ R +P LV++F +
Sbjct: 18  LWQGLWVTIRIALISMVFSIILGFLLGMVMNIPNKIIKFICRIYLEIVRIMPQLVLLFLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y      L +          +F   
Sbjct: 78  YFGAAKHLGMNLSGETAAVIVFTFW 102


>gi|29653827|ref|NP_819519.1| arginine transport system permease protein [Coxiella burnetii RSA
           493]
 gi|29541090|gb|AAO90033.1| arginine transport system permease protein [Coxiella burnetii RSA
           493]
          Length = 223

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 3/220 (1%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGL 232
             +      + ++  I +   +  +VL LF   L   F E     L   + +  F+I G 
Sbjct: 1   MNILQYWPQLLSSVVITIELMLSALVLGLFLAALLTVFSESGFSFLEAPVNVFVFIIRGT 60

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV I + Y        L +   I  S +   F    IAL+  T+A+   ++R  + ++
Sbjct: 61  PLLVQIFIIYYGSGQFHWLRE--TILWSVLKRPFGCAIIALAINTSAYTTVLLRGAIRSI 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA  +   D++ V
Sbjct: 119 PTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGTITLMDIMGV 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +I  T + I +  +   IY  L+ +I      L  K+
Sbjct: 179 TRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKL 218


>gi|107029118|ref|YP_626213.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686986|ref|YP_840233.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170734709|ref|YP_001773823.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|105898282|gb|ABF81240.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652701|gb|ABK13340.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169820747|gb|ACA95328.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 229

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 15/214 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +A      F +G  +++     +R        A  LL+    +   +P LV + L +  
Sbjct: 31  LSAVGCAAGFAVGFAVAVVRVTRTRALAP----ARALLFAYCLVFRRIPFLVTLMLVF-- 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           F    +++S   +A++ EIVRSGL +V   Q EAA+ L 
Sbjct: 85  ---------FASQSSGAKLSTFAVALVSVSLIASAYLGEIVRSGLESVHPNQREAAVTLN 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
             + K  R V++PQA R I+PP    ++  +K+++LA  +G  +L S G  + ++   A 
Sbjct: 136 FGYLKMLRYVVVPQAWRVIVPPTFGFFVMFIKDTALASQIGVMELTSAGKVLNDKGFSAG 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +    + +Y ++S  ++ F   L   +A    +
Sbjct: 196 LVYGAILLLYFAMSYPLSRFGKHLEKSLAATRNR 229


>gi|330957732|gb|EGH57992.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 236

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+     +R    +  +    
Sbjct: 6   QEYWKPFLYTDGVNVTGLAMTMWLLSASIAIGFCVSIPLSI-----ARVSKNRWVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSLAAVREQPVL-DAFFRDAMNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P A+R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGSIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAIMYLTVTFILVGLFRLAERR 227



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 37/106 (34%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  VTGLAMTMWLLSASIAIGFCVSIPLSIARVSKNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +    L             +
Sbjct: 80  TGIYSLAAVREQPVLDAFFRDAMNCTILAFALNTCAYTTEIFAGSI 125


>gi|261343546|ref|ZP_05971191.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
 gi|282568695|gb|EFB74230.1| glutamate/aspartate ABC transporter, permease protein [Providencia
           rustigianii DSM 4541]
          Length = 246

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 18/247 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFP-TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF-- 211
                      PFG       L     +T+  +   ++ +F++G    +  T  +R    
Sbjct: 4   NWNWGIFLENAPFGNTTYLGWLISGLEVTVTLSICAWIIAFLVGSFFGILRTVPNRFLAF 63

Query: 212 ----HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
               + +  + +PL+         +P L+  ++      +     QF           F+
Sbjct: 64  IGTAYVELFRNVPLIVQFFTWYLVIPELLPQSIGDWFKMELDPNYQF-----------FI 112

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           S  + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+PP+
Sbjct: 113 SSMLCLGLFTAARMTEQVRAAIQSLPRGQKSAALAMGLTLPQTYRYVLLPNAYRVILPPM 172

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           TS+ LNL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++++I L M+ 
Sbjct: 173 TSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVGINLIIMLLMSL 232

Query: 388 LNAKIAL 394
           L  K+ L
Sbjct: 233 LERKVRL 239



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           ++   G   E A F           +++Y   ++ G   T  L+    I A ++G+  G 
Sbjct: 3   INWNWGIFLENAPFG----------NTTYLGWLISGLEVTVTLSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            R   N+ +A+I   YVE+FRN+P +V  F  Y  +  +LP       +     +     
Sbjct: 53  LRTVPNRFLAFIGTAYVELFRNVPLIVQFFTWYLVIPELLPQ-----SIGDWFKMELDPN 107

Query: 177 SFPTLTMDTNAKIFVFS 193
               ++      +F  +
Sbjct: 108 YQFFISSMLCLGLFTAA 124


>gi|320326493|gb|EFW82545.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331784|gb|EFW87722.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 206

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 3/155 (1%)

Query: 214 KTGKALPLLYI---STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           KT    PL ++    + L+ G+P L+ + L Y    +        F         F +  
Sbjct: 41  KTSPYKPLQWLGSTYSTLVRGIPELLWVLLIYFGTVNGMRALGKLFDIPDLALSAFSAGV 100

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL     A+  E+ R  ++A+P+G  EA +ALG++  +    ++LPQ  R  +P L + 
Sbjct: 101 IALGICFGAYATEVFRGAILAIPKGHREAGLALGMSRSRILFKLVLPQMWRIALPGLGNL 160

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           ++ L+K+++L   +G  +++      +  T QA  
Sbjct: 161 FMILMKDTALVSVIGLEEIMRHAQIAVGFTKQAFT 195


>gi|296389384|ref|ZP_06878859.1| putative amino acid permease [Pseudomonas aeruginosa PAb1]
          Length = 238

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYIST 226
              L    LT+       + + ++G  L++      R        +    +  PLL    
Sbjct: 12  RWLLDGFLLTLGLALLSCLLATLIGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLF 71

Query: 227 FLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F  FG+P L+  AL   L+   + P+L   +F        EF++    L+ YT+AF+AE 
Sbjct: 72  FWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAAAWGLTLYTSAFVAEE 123

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ +V   Q  A +ALGLT R+  R+V+LPQA+R+ +PPL  QY+N LKNSSLA+A+
Sbjct: 124 FRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKNSSLAMAI 183

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G A+L      +  +T +  +   I   +Y+    +I  F   L  
Sbjct: 184 GLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQQ 229



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 53/112 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L GF+ T  LA    + AT+IG  +   RLS  +L++W  R Y+ +FRN P LV
Sbjct: 9   QYLRWLLDGFLLTLGLALLSCLLATLIGAPLAIARLSRRRLLSWPARAYLALFRNTPLLV 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            +FF Y  V ++LP    S +            SF  L       ++  +FV
Sbjct: 69  QLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSFEFLAAAWGLTLYTSAFV 120


>gi|167824250|ref|ZP_02455721.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 9]
          Length = 250

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 78  VVVISFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 130

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 131 HAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 190

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 191 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 227


>gi|116254188|ref|YP_770026.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258836|emb|CAK09942.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 222

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 14/215 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
               G+        T   + V + VLGIVLS+     +R       + L  LY+   ++ 
Sbjct: 9   WLWDGMGALAYGAGTTLALTVSTSVLGIVLSILGAA-ARRGPYPWLRKLVGLYVE--IMR 65

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P LV +   +           F             +  +A++   AA+  E+V +GL 
Sbjct: 66  NTPFLVQLFFIF-----------FGLPSLGIRLDPITAAVLAMTLNMAAYTIEVVGAGLD 114

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+PRGQ EAA ALGL  R     ++LPQA+  I P LTSQ + ++  S++   +   +L 
Sbjct: 115 AIPRGQKEAAQALGLRPRLVFFKIILPQAIAIIFPALTSQIIIMMLESAVVSQISVRELA 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
                + ++T ++ E  L+   IYLS+S  +   +
Sbjct: 175 QEADLLQSRTFRSFETYLVATLIYLSMSAALRRLL 209



 Score = 43.8 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 4/114 (3%)

Query: 79  YTSDSSYAT----AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
           Y+ D ++      A+  G   T  L  S  +   ++  L  A R      +  +  +YVE
Sbjct: 3   YSLDFNWLWDGMGALAYGAGTTLALTVSTSVLGIVLSILGAAARRGPYPWLRKLVGLYVE 62

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           + RN P LV +FF++  + S+    D        M LN    +   +    +A 
Sbjct: 63  IMRNTPFLVQLFFIFFGLPSLGIRLDPITAAVLAMTLNMAAYTIEVVGAGLDAI 116


>gi|330889584|gb|EGH22245.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 236

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 91/230 (39%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+     +R    +  +    
Sbjct: 6   QEYWKPFLYTDGVNITGLAMTMWLLSASIAIGFCVSIPLSI-----ARVSKNRWVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSIAAVREQPML-DAFFRDAMNCTLLAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GL   K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLNGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  ITGLAMTMWLLSASIAIGFCVSIPLSIARVSKNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  L   TL             +
Sbjct: 80  TGIYSIAAVREQPMLDAFFRDAMNCTLLAFTLNTCAYTTEIFAGAI 125


>gi|149913101|ref|ZP_01901635.1| hypothetical protein RAZWK3B_03895 [Roseobacter sp. AzwK-3b]
 gi|149813507|gb|EDM73333.1| hypothetical protein RAZWK3B_03895 [Roseobacter sp. AzwK-3b]
          Length = 428

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 68/310 (21%), Positives = 123/310 (39%), Gaps = 25/310 (8%)

Query: 98  WLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLP 157
            L F+G+ P      + G   L     +  +   YV   R     V       + L+ L 
Sbjct: 134 LLIFTGLYPFIAFWLIWGGTLLVPLVALIGLVAGYVVFLR-----VETKGFATAALTGLV 188

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV---LSL---FATRLSRHF 211
                  L   +                N   F+ + +LG V   LSL       L R  
Sbjct: 189 AVVLVWWLGGYVSTAASETLALEPVQSRNMGGFMLNMILGTVCVSLSLPFGILLALGRQS 248

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                K + +++I       L TL+ +A     +F  P           +     + + I
Sbjct: 249 DMPIIKWICVIFIEFIRGVPLITLLFVANVVLAYFLPP----------GSNFDLILRVII 298

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            ++ + +A+IAE++R GL A+PRGQ EAA +LGL + ++ RL++LPQA++  IP + +  
Sbjct: 299 MITMFASAYIAEVIRGGLAALPRGQYEAADSLGLDYAQSMRLIILPQALKISIPGIVNVS 358

Query: 332 LNLLKNSSLAVAVGFADLVSVGG----TIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           + L K+++L   +   DLV +            G   E+    + ++  +   I+ +   
Sbjct: 359 VGLFKDTTLVSVISMFDLVGMIRGPILAATEWNGVYWELWGFAVVLFFVVCYGISQYSQW 418

Query: 388 LNAKIALKEK 397
           L  ++    +
Sbjct: 419 LERQLQRDHR 428


>gi|121601784|ref|YP_988958.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Bartonella bacilliformis KC583]
 gi|121602217|ref|YP_988989.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Bartonella bacilliformis KC583]
 gi|120613961|gb|ABM44562.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Bartonella bacilliformis KC583]
 gi|120614394|gb|ABM44995.1| glutamate/aspartate ABC transporter, permease protein GltJ
           [Bartonella bacilliformis KC583]
          Length = 250

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T   +    + +  +G+V+    T  +      T +A+  +++   ++  +P L
Sbjct: 34  LDGFKNTAVLSISSLILAVFVGVVIGTVRTLPNTSVINNTFRAIGGIWVE--IMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +      + +  AL  +T+A IAE VRSG+ ++P G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAMNFSPIILITCALGFFTSARIAEQVRSGIESIPSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G T  ++ R +++P+A+R+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAIGFTTYQSYRYIMIPRAIRTILPPLTSEAMGIVKNSSIAFAVSIHELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  ++   +Y+ +S+ I + M  +   + +
Sbjct: 204 TIEEVSHVYENYMLVTILYIIISLFIFVMMAIMEKMLKI 242



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV-----AWICRVYVEVF 136
             +Y   +L GF NT  L+ S +I A  +G ++G  R   N  V       I  ++VE+ 
Sbjct: 26  SHTYLDTLLDGFKNTAVLSISSLILAVFVGVVIGTVRTLPNTSVINNTFRAIGGIWVEIM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIP 159
           RNIP LV +F  Y  V  + P  
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPA 108


>gi|77406485|ref|ZP_00783540.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77174920|gb|EAO77734.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 213

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 18/194 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+         S  LGIV++          H K  + L   YI  +++ G P L
Sbjct: 12  LVGAQVTLQVFFIXICLSIPLGIVVAFLM-----KVHFKPLQWLLTTYI--WIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y                         +  IA +   AA+ AEI R G+ ++P+G
Sbjct: 65  LQLIFFYY-----------FLPSVGISFDRMPAAIIAFTMNYAAYFAEIFRGGIESIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +  +    ++LPQ  + ++P + ++ + L+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKFSKFQTVWYIVLPQVFKIVLPSVFNETITLVKDSSLVYILGVGDLLLESKT 173

Query: 356 IINQTGQAIEIILI 369
             N+      + + 
Sbjct: 174 AANRDATLAPMFIA 187



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  + F  +  +  +G +V        K + W+   Y+ + R  P L+ + F 
Sbjct: 11  LLVGAQVTLQVFFIXICLSIPLGIVVAFLMKVHFKPLQWLLTTYIWIMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV    D          +N 
Sbjct: 71  YYFLPSVGISFDRMPAAIIAFTMNY 95


>gi|325978428|ref|YP_004288144.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|325178356|emb|CBZ48400.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 227

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 14/229 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        +      +    ++  F  +  +VL L    L +++       +  +YI 
Sbjct: 1   MFNWEFIRANIPLYQEALVLTIRLAFFGILGALVLGLLI-SLIKYYKIPVLSQICQVYIE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L    P L+ +   Y L+F  P +          V    M   + L     +++AE  
Sbjct: 60  --LSRNTPLLIQL---YFLYFGLPKI--------GIVLSSEMCAVVGLIFLGGSYMAESF 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSGL A+ + Q E  +++GL   +    V+ PQA+   +P L +  + L+K +S+   V 
Sbjct: 107 RSGLEAISKTQYEVGLSIGLKPVQNFFYVIFPQALAVSLPSLVANVIFLIKETSVFSIVA 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            ADL+ V   +I    +  E +L+ +  YL + + I+L    +  ++  
Sbjct: 167 LADLMYVAKDLIGLYYETDEALLMLVLAYLIVLLPISLVARLIERRLRR 215



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 44/97 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V T  LAF G++ A ++G L+   +     +++ IC+VY+E+ RN P L+ ++FLY  +
Sbjct: 18  LVLTIRLAFFGILGALVLGLLISLIKYYKIPVLSQICQVYIELSRNTPLLIQLYFLYFGL 77

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             +  +    +    G+          +      A  
Sbjct: 78  PKIGIVLSSEMCAVVGLIFLGGSYMAESFRSGLEAIS 114


>gi|238753991|ref|ZP_04615350.1| ABC-type amino acid transport system permease component [Yersinia
           ruckeri ATCC 29473]
 gi|238707743|gb|EEQ00102.1| ABC-type amino acid transport system permease component [Yersinia
           ruckeri ATCC 29473]
          Length = 259

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 13/236 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY----- 223
           M       ++  L   T  +  +    L I++SL A   S       G AL +       
Sbjct: 1   MDFTIITDNWRYLLWGTYPEGPLGGAALTILISLMAGVASAILGVIFGVALAMSRGVWAG 60

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I   ++     + +I L +  +F  P++   +        PE  ++  AL+   AA++A 
Sbjct: 61  ILAAVLGFFRAIPVIMLIFWTYFLLPIVFGVDI-------PEITTVVFALALIAAAYLAH 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            V++G++AV  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  
Sbjct: 114 AVKAGIMAVGEGQWQAGLSLGFNRWQVLAYVVLPQALRIMVPSFINQWISLIKDTSLAYI 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           VG  +L  +   + N++    +E+ L    IY  L +M+ +F N +N +   K+ +
Sbjct: 174 VGVNELTFLATQVNNRSMVYPMEVFLFVGLIYFVLCLMLDVFANAINRRFNPKKNR 229


>gi|126733841|ref|ZP_01749588.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           sp. CCS2]
 gi|126716707|gb|EBA13571.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           sp. CCS2]
          Length = 277

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 106/279 (37%), Gaps = 13/279 (4%)

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
             G  R +  +       + +     +  +  I            +              
Sbjct: 6   AAGMTRRARYEAQQRKRSLMIAATSTLAVVACIVIFVPMTPGWEKVQRSFFNGAVLADTF 65

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L    + +   +       +LG++++L           K+    PL           
Sbjct: 66  PKLLDAFKINLMIFSWSAPAIAILGLLIALARDA-------KSPALFPLRIFGATFTDVF 118

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             + +I   Y + F  P LG          +  ++   +AL    +A++AEI RSG+ +V
Sbjct: 119 RGVPVILTVYLIGFGIPGLGL-----PRPWNSPYIWGSLALILTYSAYVAEIFRSGIDSV 173

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q  AA++LGL+ R+  R V+LPQA+R+++P   +  + L K+ SL   +G  ++   
Sbjct: 174 HQSQRSAALSLGLSERQVMRDVVLPQAIRNVVPSQMNMLIALQKDVSLLSFIGPVEIFRQ 233

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            G   + T       +    I+L ++I    + + L AK
Sbjct: 234 AGVFKSLTAN-FTPYVGAAIIFLIVTIPATRYADYLMAK 271


>gi|320008165|gb|ADW03015.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 304

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 15/240 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
                  F          +P L     A  F     L +       RLS H   +    +
Sbjct: 48  WVKWEPFFTSPQPWETYIWPGLQNTLKAAFFALLIALPLGALFGIGRLSDHRWMRMPSGV 107

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            + +        +P L+L+      + +        F   +T      ++   L  Y A+
Sbjct: 108 VVEF-----FRAIPVLILMITANAAYAE--------FTTLATEDRLLYAVVTGLVLYNAS 154

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            +AEIVR+G++++PRGQ +AA A+G+   +  R VLLPQ++ +++P + SQ + ++K+++
Sbjct: 155 VLAEIVRAGILSLPRGQTDAAKAIGMRKGQTMRYVLLPQSVTAMLPAIVSQIVVIVKDTA 214

Query: 340 L-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L    + F +L++    +    G   I    I   IY++L+  +  F + L  ++   +K
Sbjct: 215 LGGAVLTFPELLASVRPMSANYGANTIACFTIIALIYMALNFALTSFASWLEGRLRRGKK 274



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 43/95 (45%)

Query: 61  IGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS 120
              L+E+   +  +    +TS   + T I  G  NT   AF  ++ A  +G L G GRLS
Sbjct: 37  FSSLAEKQQLDWVKWEPFFTSPQPWETYIWPGLQNTLKAAFFALLIALPLGALFGIGRLS 96

Query: 121 ANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
            ++ +     V VE FR IP L+++     +    
Sbjct: 97  DHRWMRMPSGVVVEFFRAIPVLILMITANAAYAEF 131


>gi|121610412|ref|YP_998219.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121555052|gb|ABM59201.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 231

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 9/232 (3%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
              +  +          L+    T++  A     S +LG ++SL     +     +  +A
Sbjct: 1   MTWNATVVLWAQYGASLLAGLATTLELAAIAIAGSLLLGTLVSL-----ASLSRWRPIRA 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +   Y+    +  +P LV     Y    +   L    +I    +    ++   AL  Y+A
Sbjct: 56  IAAAYVDF--VRCVPLLVHAMFWYFGATELLPLAVKEWIYEQDL--SMIAGATALIVYSA 111

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           +F+AE +RSG+ ++  GQ+EAA ALG    ++ R V+ PQA+ ++IPPL  Q + + KN+
Sbjct: 112 SFVAEDIRSGIRSISGGQIEAARALGFGFLRSFRWVIFPQAIEAVIPPLIGQAMVITKNT 171

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           S+ + +G  +L++    + + T + +E        YL +  ++ L   R   
Sbjct: 172 SVTLMIGVVELINATRRVQDATFRIVEPYAFATLSYLIVCSLLTLLAMRYER 223



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 36/82 (43%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y  ++L G   T  LA   +  + ++GTLV    LS  + +  I   YV+  R +P LV
Sbjct: 12  QYGASLLAGLATTLELAAIAIAGSLLLGTLVSLASLSRWRPIRAIAAAYVDFVRCVPLLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVL 165
              F Y     +LP+     + 
Sbjct: 72  HAMFWYFGATELLPLAVKEWIY 93


>gi|91786596|ref|YP_547548.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91695821|gb|ABE42650.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 222

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 14/234 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L +       + +I   +F  G+++ L    + R +     + +   Y+
Sbjct: 1   MQFDYTPVLERLPYLIGGAWLSLQIAFLAFAFGMLIGLGGASV-RAYGPPWARRIVGAYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F     P LV I   +           F       +   + ++ I +     A++ EI
Sbjct: 60  VFFT--NTPQLVQIFFIF-----------FALPDAGILLSPYQAVLIGMVLNAGAYLTEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G  +V + ++EAA  LG +  +  R V+LP   R + PPL++QY+ +   SS+A   
Sbjct: 107 QRAGFESVRQLELEAAETLGFSRIQTIRYVILPHIARVLFPPLSNQYILMTLGSSMAAVF 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  +L      I ++T ++IE+  +   +Y+ L+++  L +  +  +    + +
Sbjct: 167 GVEELTGRAYNINSETFRSIEVFSVAAVLYIVLTLIATLSLAFVGKRFFRAKMR 220



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 35/95 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            YT        ++ G   +  +AF       +IG    + R         I   YV  F 
Sbjct: 4   DYTPVLERLPYLIGGAWLSLQIAFLAFAFGMLIGLGGASVRAYGPPWARRIVGAYVVFFT 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P LV IFF++ ++     +      +  GM LN
Sbjct: 64  NTPQLVQIFFIFFALPDAGILLSPYQAVLIGMVLN 98


>gi|213022683|ref|ZP_03337130.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 235

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 18/238 (7%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMD-TNAKIFVFSFVLGIVLSLFATRLSR----- 209
                     PFG       L          +   ++ +F++G +  +  T  +R     
Sbjct: 5   WNWGIFLQEAPFGNTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGILRTVPNRFLSGL 64

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + +  + +PL+         +P L+   L      +     QF           F+S
Sbjct: 65  GTLYVELFRNVPLIVQFFTWYLVVPELLPEDLGMWFKAELDPNIQF-----------FLS 113

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+T
Sbjct: 114 SMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMT 173

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           S+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M+
Sbjct: 174 SEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVMS 231



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   + A F           +++Y   +  GF  T  L+ +  I A ++G++ G 
Sbjct: 3   IDWNWGIFLQEAPFG----------NTTYLGWLWSGFQVTVALSITAWIIAFLVGSIFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  V  +LP 
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVVPELLPE 94


>gi|15597399|ref|NP_250893.1| amino acid permease [Pseudomonas aeruginosa PAO1]
 gi|107101630|ref|ZP_01365548.1| hypothetical protein PaerPA_01002674 [Pseudomonas aeruginosa PACS2]
 gi|116050136|ref|YP_791047.1| putative amino acid permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891844|ref|YP_002440711.1| putative amino acid permease [Pseudomonas aeruginosa LESB58]
 gi|254235229|ref|ZP_04928552.1| hypothetical protein PACG_01120 [Pseudomonas aeruginosa C3719]
 gi|254240625|ref|ZP_04933947.1| hypothetical protein PA2G_01284 [Pseudomonas aeruginosa 2192]
 gi|313110963|ref|ZP_07796803.1| putative amino acid permease [Pseudomonas aeruginosa 39016]
 gi|9948225|gb|AAG05591.1|AE004646_12 probable amino acid permease [Pseudomonas aeruginosa PAO1]
 gi|115585357|gb|ABJ11372.1| putative amino acid permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167160|gb|EAZ52671.1| hypothetical protein PACG_01120 [Pseudomonas aeruginosa C3719]
 gi|126194003|gb|EAZ58066.1| hypothetical protein PA2G_01284 [Pseudomonas aeruginosa 2192]
 gi|218772070|emb|CAW27849.1| probable amino acid permease [Pseudomonas aeruginosa LESB58]
 gi|310883305|gb|EFQ41899.1| putative amino acid permease [Pseudomonas aeruginosa 39016]
          Length = 238

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYIST 226
              L    LT+       + + ++G  L++      R        +    +  PLL    
Sbjct: 12  RWLLDGFLLTLGLALLSCLLATLIGAPLAIARLSRRRLLSWPARAYLALFRNTPLLVQLF 71

Query: 227 FLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           F  FG+P L+  AL   L+   + P+L   +F        EF++    L+ YT+AF+AE 
Sbjct: 72  FWYFGVPALLPEALVSWLNTPHETPLLDWPSF--------EFLAGAWGLTLYTSAFVAEE 123

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ +V   Q  A +ALGLT R+  R+V+LPQA+R+ +PPL  QY+N LKNSSLA+A+
Sbjct: 124 FRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTALPPLLGQYMNALKNSSLAMAI 183

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G A+L      +  +T +  +   I   +Y+    +I  F   L  
Sbjct: 184 GLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEAFGQALQQ 229



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 53/112 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L GF+ T  LA    + AT+IG  +   RLS  +L++W  R Y+ +FRN P LV
Sbjct: 9   QYLRWLLDGFLLTLGLALLSCLLATLIGAPLAIARLSRRRLLSWPARAYLALFRNTPLLV 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            +FF Y  V ++LP    S +            SF  L       ++  +FV
Sbjct: 69  QLFFWYFGVPALLPEALVSWLNTPHETPLLDWPSFEFLAGAWGLTLYTSAFV 120


>gi|170721101|ref|YP_001748789.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida W619]
 gi|169759104|gb|ACA72420.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida W619]
          Length = 221

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 14/214 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V   +LG+ + +      R +  +    L  LY+   LI   P +V +   + 
Sbjct: 22  WFTLQLTVVGTLLGVAIGVLG-AGVRAWRVRPFDMLFGLYVE--LIRNTPFIVQLFFIF- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F          E+ +  +A+     A+  EI+R+G+ A+P+GQ+EAA AL
Sbjct: 78  ----------FGLPALGIRLTEWQAAVLAMVINLGAYSTEIIRAGIQAIPKGQLEAAAAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            ++  +A R V+L  A+  + P LTSQ + ++  S++   +   +L      I ++  +A
Sbjct: 128 AMSRFEAFRHVVLQPALAKVWPALTSQIVIVMLGSAVCSQIATEELSFAANFIQSRNFRA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            E  L+   +YL ++I +   +  L  ++ +  +
Sbjct: 188 FETYLLTTVLYLVMAIALRQLLAWLGQRLLMGRR 221



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 37/100 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L   G +    IG L    R    +    +  +YVE+ RN P +V +FF+
Sbjct: 17  LLKGAWFTLQLTVVGTLLGVAIGVLGAGVRAWRVRPFDMLFGLYVELIRNTPFIVQLFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + ++             M +N    S   +     A 
Sbjct: 77  FFGLPALGIRLTEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|288905438|ref|YP_003430660.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|288732164|emb|CBI13729.1| putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
          Length = 227

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 14/229 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        +      +    ++  F  +  +VL L    L +++       +  +YI 
Sbjct: 1   MFNWEFIRANIPLYQEALVLTIRLAFFGILGALVLGLLI-SLIKYYKIPVLSQICQVYIE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L    P L+ +   Y L+F  P +          +    M   + L     +++AE  
Sbjct: 60  --LSRNTPLLIQL---YFLYFGLPKI--------GIILSSEMCAVVGLIFLGGSYMAESF 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSGL A+ + Q E  +++GL   +    V+ PQA+   +P L +  + L+K +S+   V 
Sbjct: 107 RSGLEAISKTQYEVGLSIGLKPVQNFFYVIFPQALAVSLPSLVANVIFLIKETSVFSIVA 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            ADL+ V   +I    +  E +L+ +  YL + + I+L    +  ++  
Sbjct: 167 LADLMYVAKDLIGLYYETDEALLMLVLAYLIVLLPISLVARLIERRLRR 215



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 44/97 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V T  LAF G++ A ++G L+   +     +++ IC+VY+E+ RN P L+ ++FLY  +
Sbjct: 18  LVLTIRLAFFGILGALVLGLLISLIKYYKIPVLSQICQVYIELSRNTPLLIQLYFLYFGL 77

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             +  I    +    G+          +      A  
Sbjct: 78  PKIGIILSSEMCAVVGLIFLGGSYMAESFRSGLEAIS 114


>gi|322513521|ref|ZP_08066622.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinobacillus ureae ATCC 25976]
 gi|322120674|gb|EFX92565.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Actinobacillus ureae ATCC 25976]
          Length = 227

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 6/227 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L+     M T+  +   S ++  VL++  T L      K  K +   Y+  F   
Sbjct: 1   MFQDYLAVIAQGMPTSLSLTAVSLLIAFVLAVVFTFLL-SMENKLIKVMVNGYLMLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y  H         +      +S  +    +AL+  +AA+  ++    + 
Sbjct: 58  GTPLLVQFFLIY--HGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ E   ALGL+       +L+P A+R  +P  +++ + + K +SLA  +   D++
Sbjct: 116 AIPKGQWETCAALGLSRLDTL-KILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +      AI I  I   IYL ++ ++ + + R+ AK+ + E+
Sbjct: 175 GYARQLYGTKYDAITIYGIAGAIYLVITGIMTILLRRVEAKVLVFER 221


>gi|317486179|ref|ZP_07945018.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
 gi|316922570|gb|EFV43817.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bilophila
           wadsworthia 3_1_6]
          Length = 229

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 2/200 (1%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLL--YISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           G V++L     S       G  L +L  Y  +F+   +   V       +     +    
Sbjct: 21  GSVVTLITVIGSLALGFCIGLPLAVLQVYGPSFIRRLIGVYVWFFRGMPILLLLFLFYFG 80

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            F           +  + L   +AA+ ++I R  +  +P GQ  AA ALG+   +A R +
Sbjct: 81  LFEVIGLNLSTITASCLVLGMASAAYQSQIFRGSIETLPVGQFRAARALGMNDGQAIRHI 140

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R  IP  ++++  LLK+S+L   +G  ++++    + ++T + + + +    +Y
Sbjct: 141 VLPQALRLSIPGWSNEFSILLKDSALCFVLGTPEIMARTHFVASRTYEHLPLYITAGLLY 200

Query: 375 LSLSIMIALFMNRLNAKIAL 394
             ++++    +  L  K+ +
Sbjct: 201 FGITLVGVHILRVLERKVHI 220


>gi|227504863|ref|ZP_03934912.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium striatum ATCC 6940]
 gi|227198554|gb|EEI78602.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium striatum ATCC 6940]
          Length = 228

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 7/231 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
               L         LT+       + S +LG +L+       R       + L   YI T
Sbjct: 4   MWSQLGPELWPAFWLTIKLTLWSALGSMILGTILTAM-----RVSPVGILRFLATAYI-T 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            +     TLV++   + L+    V           +        +    YT+AF+AE +R
Sbjct: 58  IVRNTPLTLVVLFCSFGLYQTLGVTLASRESATFLIDNNVRLAIVGFILYTSAFVAESLR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+  V  GQ EAA +LGL+  +    ++ PQA+R+ I PL +  + L KN+++A  +G 
Sbjct: 118 SGINTVDFGQAEAARSLGLSFTQTFSTIVFPQAVRAAIVPLGNTLIALTKNTTIASVIGV 177

Query: 347 ADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +  + I     Q   I LI+   ++ L++ + L + +L+ K+A+K+
Sbjct: 178 AEASLLMKSTIEFHASQLFVIFLIFAAGFIILTLPMGLGLGKLSEKLAVKK 228



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 43/99 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +   F  T  L     + + I+GT++ A R+S   ++ ++   Y+ + RN P  +V+ F 
Sbjct: 12  LWPAFWLTIKLTLWSALGSMILGTILTAMRVSPVGILRFLATAYITIVRNTPLTLVVLFC 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              +   L +   S      +  NN  L+     + T+A
Sbjct: 72  SFGLYQTLGVTLASRESATFLIDNNVRLAIVGFILYTSA 110


>gi|332179314|gb|AEE15003.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermodesulfobium narugense DSM 14796]
          Length = 216

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 26/206 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +FS   GI+L +     +++  +     +  +YI +                    + P
Sbjct: 29  IIFSTFFGIILGV-----AKYSKKPIVSQIAAIYIDSIR------------------NIP 65

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +L            P   +  +A++ +T A IAEIVR GL ++ +GQ EAA + G ++ +
Sbjct: 66  LLLFILACRFMIPIPPIQAAILAMTIFTTAMIAEIVRGGLNSIDKGQWEAAASQGFSYTQ 125

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               ++LPQA+R +IPPL SQ++  +K++S   AVG  +L   G  I+ Q  +  ++ ++
Sbjct: 126 TLIYIVLPQAIRKVIPPLISQFITTIKDTSFTWAVGIEELTGRGMIIMGQYAEPAQVFVL 185

Query: 370 WMFI---YLSLSIMIALFMNRLNAKI 392
           +  I   Y  ++  +++       K+
Sbjct: 186 FGMIALTYFVINYTLSVIARNQQKKM 211



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 52/145 (35%), Gaps = 4/145 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   +I +T  G ++G  + S   +V+ I  +Y++  RNIP L+ I   
Sbjct: 14  LLKGLQVTLTIAVFTIIFSTFFGIILGVAKYSKKPIVSQIAAIYIDSIRNIPLLLFILAC 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG----LSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
              +           +  F   +        L+         A    FS+   ++  +  
Sbjct: 74  RFMIPIPPIQAAILAMTIFTTAMIAEIVRGGLNSIDKGQWEAAASQGFSYTQTLIYIVLP 133

Query: 205 TRLSRHFHEKTGKALPLLYISTFLI 229
             + +       + +  +  ++F  
Sbjct: 134 QAIRKVIPPLISQFITTIKDTSFTW 158


>gi|319744951|gb|EFV97281.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 224

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 18/194 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     +   S  LGIV++          H K  + L   YI  +++ G P L
Sbjct: 23  LVGAQVTLQVFFIVICLSIPLGIVVAFLM-----KVHFKPLQWLLTTYI--WIMRGTPLL 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y                         +  IA +   AA+ AEI R G+ ++P+G
Sbjct: 76  LQLIFFYY-----------FLPSVGISFDRMPAAIIAFTMNYAAYFAEIFRGGIESIPKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  +  +    ++LPQ  + ++P + ++ + L+K+SSL   +G  DL+    T
Sbjct: 125 QYEAAKVLKFSKFQTVWYIVLPQVFKIVLPSVFNETITLVKDSSLVYILGVGDLLLESKT 184

Query: 356 IINQTGQAIEIILI 369
             N+      + + 
Sbjct: 185 AANRDATLAPMFIA 198



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +LVG   T  + F  +  +  +G +V        K + W+   Y+ + R  P L+ + F 
Sbjct: 22  LLVGAQVTLQVFFIVICLSIPLGIVVAFLMKVHFKPLQWLLTTYIWIMRGTPLLLQLIFF 81

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV    D          +N 
Sbjct: 82  YYFLPSVGISFDRMPAAIIAFTMNY 106


>gi|313115583|ref|ZP_07801042.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622098|gb|EFQ05594.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 219

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-----MSLYIALSC 275
           L  +      +P L  I   Y QL  + P+L Q  FI              +     L+ 
Sbjct: 36  LACAVIQYDKVPVLRQIVGVYIQLSRNTPLLVQLFFIYYGLPKVGIRTNAEICGIAGLAF 95

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              +++AE  RSGL A+   Q E+A +LG+   +  R ++LPQAM + +P   +  + LL
Sbjct: 96  LGGSYMAEAFRSGLEAIEPIQTESAYSLGMNRWQTMRYIILPQAMSTSMPAFMANVIFLL 155

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           K +S+  A+   DL+     +I    + IE + + +  YL + + +++  + +  ++ 
Sbjct: 156 KETSVFSAISLMDLMFTAKDLIGMYSKTIECLFLLVVFYLIILLPVSIVGSLIERRLR 213


>gi|227487311|ref|ZP_03917627.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227092737|gb|EEI28049.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 226

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 8/228 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              L    L    +T+       + +F+LG++L+       R       +++   YI T 
Sbjct: 5   WADLWPGLLGAFWVTIKLTFFSAIGAFILGVILTAM-----RVSPVAILRSIARFYIET- 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +   P  ++I       +    L           +  F    +A   YT+ F+AE +RS
Sbjct: 59  -VRNTPLTLIILFCSIGLYQNLGLTLAPENDNFIKNNNFWLAVLAFVLYTSTFVAESLRS 117

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V  GQ EAA +LGL+  +  R V+ PQA +S + PL +  + L KN+++A  +G A
Sbjct: 118 GINTVHFGQAEAARSLGLSFTQTFRFVVFPQAFKSAVVPLGNTLIALTKNTTIASVIGVA 177

Query: 348 DLVSVGG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +   +   TI N     I + +I+   ++ +++ + L   R   + A+
Sbjct: 178 EASLLMKSTIENHANHTILVFMIFALGFIIITLPMGLLFTRYTRRKAV 225



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 35/82 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L  F  T  L F   I A I+G ++ A R+S   ++  I R Y+E  RN P  ++I
Sbjct: 9   WPGLLGAFWVTIKLTFFSAIGAFILGVILTAMRVSPVAILRSIARFYIETVRNTPLTLII 68

Query: 146 FFLYKSVLSVLPIPDHSIVLPF 167
            F    +   L +        F
Sbjct: 69  LFCSIGLYQNLGLTLAPENDNF 90


>gi|218886665|ref|YP_002435986.1| polar amino acid ABC transporter inner membrane protein
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757619|gb|ACL08518.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 226

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 101/230 (43%), Gaps = 13/230 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L +              +  LG++L +    +++ +     + +   Y+
Sbjct: 1   MLESITTIIEALPYILEGSLVTVATVFGAMALGLLLGV-PMSVAQVYGALPVRLVVGFYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F                +     +     F         F +  + L   +AA+ ++I
Sbjct: 60  WFFR------------GMPILVLLLLFYFGLFQLIGLNLSAFTASCLVLGMTSAAYQSQI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  ++A+P+GQ+ AA ALG++   A R ++LPQA+R  IP  +++Y  LLK+S+LA  +
Sbjct: 108 FRGAILALPQGQLRAARALGMSDGTAIRSIVLPQALRLSIPGWSNEYSILLKDSALAFVL 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  ++++    + ++T + + + +    +Y  ++++    + RL  K+ +
Sbjct: 168 GTPEIMARTHFVASRTYEHLPLYMTAGALYFVITLIGLKVLRRLEHKLHI 217


>gi|167911014|ref|ZP_02498105.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 112]
          Length = 193

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 9   VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 61

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 62  HAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 121

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 122 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 158


>gi|158423211|ref|YP_001524503.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330100|dbj|BAF87585.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 466

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 70/317 (22%), Positives = 124/317 (39%), Gaps = 28/317 (8%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF--RNIPPLV----VIFF 147
           +N+F L++ G +           G  S       +  + V        P L       F 
Sbjct: 166 LNSFILSWIG-LGGVFTAIGKAVGLPSGFWPDYVVSALLVSAIVGAVAPLLAGSRRSAFR 224

Query: 148 LYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
               V +VL +   ++ + FG+ ++  R      +T+       + S  LGI+L+L    
Sbjct: 225 ATLVVFAVLGVVLAAVNINFGLEWVETRQWGGMMVTLVIAVTGIIASLPLGILLAL---- 280

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
             R            L+I  +    L T VL    Y L           F+ G       
Sbjct: 281 -GRRSKMPLMHIASTLFIEFWRGVPLVT-VLFFATYMLPL---------FLPGRFTIDGL 329

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +   + ++ + +A++AE+VR GL A+P+GQ E A+ALGL      RLV+LPQA++ +IP 
Sbjct: 330 LRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMALGLPGTLMMRLVVLPQALKLVIPG 389

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI-----ILIWMFIYLSLSIMI 381
           + + ++ L K+++L + V   DL+ V          A               Y      +
Sbjct: 390 IVNTFIALFKDTTLVLIVSIFDLLGVLRAAFTDPSWATPTTLYTGFGFAGLFYFIFCFGM 449

Query: 382 ALFMNRLNAKIALKEKK 398
           + +   L  ++    + 
Sbjct: 450 SRYSLALEKRLDRNHRH 466



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 8/159 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +A +G+I +  +G L+  GR S   L+     +++E +R +P + V+FF    
Sbjct: 256 GMMVTLVIAVTGIIASLPLGILLALGRRSKMPLMHIASTLFIEFWRGVPLVTVLFFATYM 315

Query: 152 VLSVLPIPDHSIVL---PFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVLSLFAT 205
           +   LP       L     G+ L         +     A     +  +  LG+  +L   
Sbjct: 316 LPLFLPGRFTIDGLLRALVGVALFASAYMAEVVRGGLQAIPKGQYEGAMALGLPGTLMMR 375

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            +     +     +P +  +   +F   TLVLI   + L
Sbjct: 376 LVV--LPQALKLVIPGIVNTFIALFKDTTLVLIVSIFDL 412


>gi|213419684|ref|ZP_03352750.1| glutamate/aspartate transport system permease protein GltJ
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
          Length = 142

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/129 (38%), Positives = 81/129 (62%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+S  I L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+P
Sbjct: 7   FLSSMICLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVP 66

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           P+TS+ +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M
Sbjct: 67  PMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAVIMLVM 126

Query: 386 NRLNAKIAL 394
           + +  K+ L
Sbjct: 127 SLVERKVRL 135


>gi|303253513|ref|ZP_07339652.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248384|ref|ZP_07530407.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307261838|ref|ZP_07543502.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|302647623|gb|EFL77840.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306855122|gb|EFM87302.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306868455|gb|EFN00268.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 227

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 10/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + +FVL ++L+   +  S+           ++     L  G P LV   L Y  
Sbjct: 19  LTAVSLLIAFVLAVILTFLLSMESKLIK-------AIVNGYLMLFTGTPLLVQFFLIY-- 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H         +      +S  +    +AL+  +AA+  ++    + A+P+GQ E   ALG
Sbjct: 70  HGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCAALG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       +L+P A+R  +P  +++ + + K +SLA  +   D++     +      AI
Sbjct: 130 LSRLDTL-KILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEYDAI 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 189 TIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|260575385|ref|ZP_05843384.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022305|gb|EEW25602.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 250

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 93/239 (38%), Gaps = 3/239 (1%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           +L ++     +  L    +      +     +  +  I   +F LG  + +      + +
Sbjct: 1   MLGIIGATAAASTLDLLAWSPPGWGANLLRGLLNSILIATGAFWLGAAIGICG-AYGKLY 59

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                +   LL + T ++  +P LVLI + Y    D                    +   
Sbjct: 60  GGPVLRD--LLAVYTTVVRAVPELVLILILYYAGTDAVNQMLVALGYERIQLSGLAAGIG 117

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L     A+  E++R  ++AVP GQ+EAA A+G+      R + LP  +   +P L + +
Sbjct: 118 VLGIVQGAYATEVLRGAILAVPAGQIEAARAMGMPPVLLARRITLPAMLSFALPGLANLW 177

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           L   K+++L   VGFA+L          T       +    +YL++S+   L   RL A
Sbjct: 178 LVATKDTALLAVVGFAELTQETRQAAGATKAYFTFFMAAGVLYLAISLGSGLVFGRLEA 236



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 31/75 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G +N+  +A         IG     G+L    ++  +  VY  V R +P LV+
Sbjct: 24  WGANLLRGLLNSILIATGAFWLGAAIGICGAYGKLYGGPVLRDLLAVYTTVVRAVPELVL 83

Query: 145 IFFLYKSVLSVLPIP 159
           I  LY +    +   
Sbjct: 84  ILILYYAGTDAVNQM 98


>gi|257868426|ref|ZP_05648079.1| L-cystine transport system permease tcyM [Enterococcus gallinarum
           EG2]
 gi|257802590|gb|EEV31412.1| L-cystine transport system permease tcyM [Enterococcus gallinarum
           EG2]
          Length = 236

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 5/236 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    L   +  + T   + + + V+G V+ L    L R +  K     P+L +
Sbjct: 1   MSFQLSIMIEALKTASHYIGTTLFMALTALVIGAVVGLII-ALIRLYRIKILA--PVLQV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP--EFMSLYIALSCYTAAFIA 282
              ++ G+P +++I   Y +   +  +   +                  ALS  +A   +
Sbjct: 58  IVTVLKGVPVVLVILALYLISAKQFDIWAESMHWTLRFKDFNMVWIAIAALSLMSAINSS 117

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R    AV +GQ +AA ++G+T+ +  R VLLPQA    +P  ++  ++L+K S+LA 
Sbjct: 118 EIFRGAFAAVKKGQFDAAKSIGMTNLQVIRRVLLPQAWPISLPMFSNLLISLVKASALAS 177

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            V   D+ +       Q  + +E  +    IY  +S++I      L  ++  K ++
Sbjct: 178 MVSVVDVFAAAKITAQQNYRFLEAYVAVAIIYWLISLVIEKGTQLLENRLLRKLRR 233


>gi|170700298|ref|ZP_02891311.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170134785|gb|EDT03100.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 261

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 11/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      M  N  I   +  +G +  L    L         + +   Y+  F     P 
Sbjct: 46  WLPVLGKAMLVNIGISTIAIAIGTLTGLVLGPL-TLSRLGIARVMARAYVQLF--RNAPL 102

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVLI     +        +  F   S   P++  + + L+   +A  AEI R  + ++P 
Sbjct: 103 LVLIYFSTYVF-----PFEIRFGHASLPFPDWFKVTLGLALPASANFAEIFRGAIQSIPH 157

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q +AA +L  +  +  R ++LPQ +R ++PP  + Y ++   ++LA  VG  DL+    
Sbjct: 158 AQWDAARSLAFSRVQVFRWIILPQCVRRMLPPWMNLYASIAMATALASLVGVHDLLDTAQ 217

Query: 355 TIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              N   +A   + +    + ++ +    IA F   L  + A
Sbjct: 218 VASNTVARADFTVVVYFTVLGMFFAYCYPIARFTRLLERRHA 259



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 36/86 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   +    +    ++   +   T+ G ++G   LS   +   + R YV++FRN P LV
Sbjct: 45  TWLPVLGKAMLVNIGISTIAIAIGTLTGLVLGPLTLSRLGIARVMARAYVQLFRNAPLLV 104

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +I+F        +     S+  P   
Sbjct: 105 LIYFSTYVFPFEIRFGHASLPFPDWF 130


>gi|145593976|ref|YP_001158273.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora tropica CNB-440]
 gi|145303313|gb|ABP53895.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora tropica CNB-440]
          Length = 235

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 13/226 (5%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGL 232
             LT+       + + +LG  +++         R     +  T + LPL  +  F  FGL
Sbjct: 15  FWLTLQICFLAAIGALILGSAVAVLRISPVPPLRALGTAYVNTFRNLPLTIVMFFAAFGL 74

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P     AL     F +       F    T  P F    IAL  YT+AF+ E +RSG+ AV
Sbjct: 75  P-----ALGSNADFLRIPGLDLVFSRLGTDLPYFRFALIALVLYTSAFVCEALRSGVNAV 129

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVS 351
           P GQ EAA +LGLT  +  R V+LPQ+  + + PL S  + ++KNS+L    G   DL  
Sbjct: 130 PAGQAEAARSLGLTFIQNLRHVVLPQSWTASVVPLGSVIIAMIKNSALIGFFGVIGDLSQ 189

Query: 352 VGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               + +  G+    + +     YL +++ +   ++R+  + A+  
Sbjct: 190 TADQLTSAGGEPFIPVAIGISIGYLIMTVPLGALLDRIERRQAVAR 235



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 GF  T  + F   I A I+G+ V   R+S    +  +   YV  FRN+P  +V+
Sbjct: 8   FDVFAGGFWLTLQICFLAAIGALILGSAVAVLRISPVPPLRALGTAYVNTFRNLPLTIVM 67

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           FF    + ++    D   +    +  +  G   P       A +   S  +
Sbjct: 68  FFAAFGLPALGSNADFLRIPGLDLVFSRLGTDLPYFRFALIALVLYTSAFV 118


>gi|108799121|ref|YP_639318.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119868236|ref|YP_938188.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108769540|gb|ABG08262.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. MCS]
 gi|119694325|gb|ABL91398.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. KMS]
          Length = 226

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 6/226 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              +       T+       V + +LG VL+       R         L   Y++     
Sbjct: 7   YRAQIFEAFWTTIQLTVYSAVGALILGTVLAGM-----RLSPVPMLSWLGTAYVNVIRNT 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L TL+++   + +     +         S     F    + L+ YTA+F+ E VRSG+ 
Sbjct: 62  PL-TLIILFCSFGVSQTLGITLVDPQSSTSIEDSNFRLAVLGLTVYTASFVCETVRSGVN 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP GQ EAA +LGLT  +  R++LLPQA RS++ PL S  + L KN+++A A+G A+  
Sbjct: 121 TVPLGQAEAARSLGLTFSQNLRMILLPQAFRSVVIPLGSVLIALTKNTTIASAIGVAEAA 180

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +I  T   + +  I+   ++ L++ + L    L  ++A+  
Sbjct: 181 LLMKEMIENTAALLVVGSIFALGFIILTLPLGLVFGWLGKRLAVAR 226



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I   F  T  L     + A I+GT++   RLS   +++W+   YV V RN P  ++
Sbjct: 7   YRAQIFEAFWTTIQLTVYSAVGALILGTVLAGMRLSPVPMLSWLGTAYVNVIRNTPLTLI 66

Query: 145 IFFLYKSVLSV 155
           I F    V   
Sbjct: 67  ILFCSFGVSQT 77


>gi|330898592|gb|EGH30011.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 232

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 94/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +   V  F + I LS+     +R   ++  +    
Sbjct: 6   QEYWKPFLYTDGVNVTGLAMTMWLLSASIVIGFCVSIPLSI-----ARVSGKRWVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSLAAVREQPML-DAFFRDAMNCTILAFTLNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + ++    +   +   R+S  + V W  + Y  +FR  P  + +   Y
Sbjct: 20  VTGLAMTMWLLSASIVIGFCVSIPLSIARVSGKRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSLAAVREQPMLDAFFRDAMNCTILAFTLNTCAYTTEIFAGAI 125


>gi|317403731|gb|EFV84216.1| amino acid ABC transporter [Achromobacter xylosoxidans C54]
          Length = 229

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+  +    +   +LG V+ +  +   R  H+  G  + +L        G 
Sbjct: 14  PFLLKGFWETLKISFVAIIAGSLLGFVIGVIRSYRVRGLHQLLGLYIHVL-------RGT 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV + + Y +     +                 + +++LS YT+ ++AEIV   + AV
Sbjct: 67  PFLVQLYIFYFVLPGTGI--------ALLHWDSATAAFVSLSVYTSCYVAEIVSGAIRAV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRGQ E A+ LGL   +  RLV+LPQAMR I+ P++  Y+ L+K++++   VG  +L   
Sbjct: 119 PRGQTEGAMTLGLRPLQILRLVILPQAMRLIVQPMSGVYVMLIKSTAILSVVGITELTRQ 178

Query: 353 GGT-IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G   II    +++ I  +   IY      +      L  ++
Sbjct: 179 GEVFIITFPAKSLFIYGLIAAIYFLYCYPLLRLATWLEKRL 219



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  ++F  +I  +++G ++G  R    + +  +  +Y+ V R  P LV ++  
Sbjct: 16  LLKGFWETLKISFVAIIAGSLLGFVIGVIRSYRVRGLHQLLGLYIHVLRGTPFLVQLYIF 75

Query: 149 YKSVLSVLPIPDHSIV 164
           Y  +        H   
Sbjct: 76  YFVLPGTGIALLHWDS 91


>gi|311111808|ref|YP_003983030.1| glutamine ABC transporter permease [Rothia dentocariosa ATCC 17931]
 gi|310943302|gb|ADP39596.1| glutamine ABC superfamily ATP binding cassette transporter,
           permease protein [Rothia dentocariosa ATCC 17931]
          Length = 311

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 120/258 (46%), Gaps = 10/258 (3%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           NI  ++V       VLSV+          +      +      L    +        V+ 
Sbjct: 31  NIAAILVFIAFAVYVLSVMGAKGQLEAEKWTDLFTAKAWGSYYLPGLVSTLQAAGISVIT 90

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
            +       ++R    +  +    + +  F        VL+ + +   F    L +F++I
Sbjct: 91  SIAFGVIFGMARLAQNRVLRWFGTIVVEFFRAVP----VLMMMIFFWLF----LSRFSWI 142

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
             S +   F+++ I L+ Y  + IAE++RSG+  +PRGQ EA +A+GLT  +  R +L+P
Sbjct: 143 NPSQL--PFLAVVIGLTFYNGSVIAELLRSGVKQLPRGQGEAGLAIGLTPGQTLRTILMP 200

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           QA  +++P + SQ++ +LK+++L   + + +L++    I +  G  ++ +L+   +++ +
Sbjct: 201 QAFNAMMPSMLSQFVVILKDTALGYIISYPELLASARRIGSGDGNVLQTLLLAAALFVIV 260

Query: 378 SIMIALFMNRLNAKIALK 395
           +  +      L++ +A +
Sbjct: 261 NFALTALATWLSSFLASR 278



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 17/128 (13%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            +       I   L+     ++ ++ +    +                    +      +
Sbjct: 23  AKARTRVFNIAAILVFIAFAVYVLSVMGAKGQLE-----------------AEKWTDLFT 65

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++ +  L G V+T   A   +I +   G + G  RL+ N+++ W   + VE FR +P 
Sbjct: 66  AKAWGSYYLPGLVSTLQAAGISVITSIAFGVIFGMARLAQNRVLRWFGTIVVEFFRAVPV 125

Query: 142 LVVIFFLY 149
           L+++ F +
Sbjct: 126 LMMMIFFW 133


>gi|228477743|ref|ZP_04062372.1| ABC-type amino acid transport permease component [Streptococcus
           salivarius SK126]
 gi|228250632|gb|EEK09843.1| ABC-type amino acid transport permease component [Streptococcus
           salivarius SK126]
          Length = 228

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 89/209 (42%), Gaps = 1/209 (0%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V + +L  + +LF   L + +  +  K   ++Y++         L+L      
Sbjct: 18  PVTLGIMVVAILLSFLPALFL-ALGQIYKVRGVKTFSIVYLAFIRATPPILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                     +I  S  T   ++EI+RS L+ V +GQ+EAA A+
Sbjct: 77  PSLLNQFFKGIGSHIDVFKVNPLYYAFIIYSLMTTGSLSEIIRSALLTVDKGQLEAAQAI 136

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT R+A   ++ PQA++S +P L +  +N++K +SL   +   D+ ++         Q 
Sbjct: 137 GLTTRQAYLRIVFPQALKSALPNLCNLVINIVKGTSLVFVMTIKDITAIARVEAAYGYQY 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E   +   +YL +  +I +  N    K+
Sbjct: 197 FESYFVIFILYLIICGIIQVLFNLGERKL 225


>gi|227329359|ref|ZP_03833383.1| putative amino acid ABC transporter, permease protein
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 221

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 92/220 (41%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + + GI + +F   L         +   L  +   LI   
Sbjct: 11  FPFWPELLEGLWVTIELTVMATLGGIAIGIFGAALRSGKPTLLSR---LWGVYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQL---FFIVFGLPSLGLKLTAGQ--------AALLAMLINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V + +L   
Sbjct: 117 PKGQWEAARVLGLTRMQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I ++T  + E+ L     YL LS+++   +     + 
Sbjct: 177 ANLIQSRTFLSFEVYLATTLCYLMLSVLMRQLLLLAGRRF 216



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++   +   +L G   T  L     +    IG    A R     L++ +  VYVE+ 
Sbjct: 5   LNFSALFPFWPELLEGLWVTIELTVMATLGGIAIGIFGAALRSGKPTLLSRLWGVYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + S+             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPSLGLKLTAGQAALLAMLIN 100


>gi|19553157|ref|NP_601159.1| glutamate ABC-type transporter, permease component [Corynebacterium
           glutamicum ATCC 13032]
 gi|62390792|ref|YP_226194.1| glutamate permease [Corynebacterium glutamicum ATCC 13032]
 gi|22002045|sp|P48244|GLUC_CORGL RecName: Full=Glutamate transport system permease protein gluC
 gi|21324722|dbj|BAB99345.1| ABC-type transporter, permease components (glutamate)
           [Corynebacterium glutamicum ATCC 13032]
 gi|41326130|emb|CAF20293.1| GLUTAMATE PERMEASE [Corynebacterium glutamicum ATCC 13032]
          Length = 228

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 7/230 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              L    L    +T+       + + + G +L+       R    K  + L   YI+T 
Sbjct: 5   WADLGPSLLPAFWVTIKLTIYSAIGAMIFGTILTTM-----RVSPVKILRTLSTAYINTV 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               L TLV++   + L+ +  +           V   F    +    YT+ F+AE +RS
Sbjct: 60  RNTPL-TLVVLFCSFGLYQNLGLTLAGRESSTFLVDNNFRLAVLGFILYTSTFVAESLRS 118

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +  + L KN+++A  +G  
Sbjct: 119 GINTVHFGQAEAARSLGLGFGATFRSIIFPQAVRAAIVPLGNTLIALTKNTTIASVIGVG 178

Query: 348 DLVSVGG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +   TI N       +  I+   ++ L++ + L + +L+ ++A+K+
Sbjct: 179 EASLLMKATIENHANMLFVVFAIFAVGFMILTLPMGLGLGKLSERLAVKK 228



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 38/97 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     I A I GT++   R+S  K++  +   Y+   RN P  +V+ F 
Sbjct: 12  LLPAFWVTIKLTIYSAIGAMIFGTILTTMRVSPVKILRTLSTAYINTVRNTPLTLVVLFC 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
              +   L +          +  NN  L+     + T
Sbjct: 72  SFGLYQNLGLTLAGRESSTFLVDNNFRLAVLGFILYT 108


>gi|315652804|ref|ZP_07905778.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315485006|gb|EFU75414.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 221

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 6/178 (3%)

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGS-----TVSPEFMSLYIALSC 275
           L  +  L   +P L  +   Y +L  + P+L Q  FI             F+   + L+ 
Sbjct: 38  LVCTLILHKKIPLLRQLVSIYVELSRNTPLLIQLFFIYYGLPKLGIKIDAFVCGVLGLAF 97

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
              +++ E  RSG+ ++ + Q E+A++LGL+H +A   +LLPQA+    P   +  + LL
Sbjct: 98  LGGSYMCEAFRSGIESIDKIQEESALSLGLSHNQALFYILLPQAVSISTPAFVANIIFLL 157

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           K +S+  A+   DL+     +I    + +E + + +F YL + + +++  + +  K+ 
Sbjct: 158 KETSVFSAISLMDLMFTAKDLIGIYYKTVESLALLVFFYLIILLPVSILGSYVERKVR 215


>gi|326776168|ref|ZP_08235433.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|326656501|gb|EGE41347.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 215

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 17/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   V + VLG++++ F     R       +     +++      L              
Sbjct: 23  AVSSVIALVLGVIIAGF-----RVSPVPPLRYFGTAWVTLMRNTPLTL--------LFLI 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+ +  F G       F+   +AL  YT++F+ E VRSG+  VP GQ EAA ++G+T
Sbjct: 70  FFFVVPEILFPG----MSPFVLGSLALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMT 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  ++V+LPQA R++IPPL+S ++ L KNS++A A   A+L      + ++    + +
Sbjct: 126 FAQTLQIVVLPQATRTVIPPLSSIFIALTKNSAIAGAFSVAELFGWQKLMSDKGYDIVPV 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL ++  I+     L  ++ +  
Sbjct: 186 FIWVAIGYLVVTFTISGLFRLLERRMEVAR 215



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  +     + A ++G ++   R+S    + +    +V + RN P  ++    +  
Sbjct: 14  GFIGTVSITAVSSVIALVLGVIIAGFRVSPVPPLRYFGTAWVTLMRNTPLTLLFLIFFFV 73

Query: 152 VLSVLPIPDHSIVL 165
           V  +L       VL
Sbjct: 74  VPEILFPGMSPFVL 87


>gi|145295857|ref|YP_001138678.1| hypothetical protein cgR_1782 [Corynebacterium glutamicum R]
 gi|140845777|dbj|BAF54776.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 228

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/215 (25%), Positives = 102/215 (47%), Gaps = 3/215 (1%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                K+ ++S +  ++     T + R    K  + L   YI+T     L TLV++   +
Sbjct: 16  FWVTIKLTIYSAIGAMIFGTILTAM-RVSPVKILRTLSTAYINTVRNTPL-TLVVLFCSF 73

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L+ +  +           V   F    +    YT+ F+AE +RSG+  V  GQ EAA +
Sbjct: 74  GLYQNLGLTLAGRESSTFLVDNNFRLAVLGFILYTSTFVAESLRSGINTVHFGQAEAARS 133

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG-TIINQTG 361
           LGL      R ++ PQA+R+ I PL +  + L KN+++A  +G  +   +   TI N   
Sbjct: 134 LGLGFGATFRSIIFPQAVRAAIVPLGNTLIALTKNTTIASVIGVGEASLLMKATIENHAN 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +  I+   ++ L++ + L + +L+ ++A+K+
Sbjct: 194 MLFVVFAIFAVGFMILTLPMGLGLGKLSERLAVKK 228



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     I A I GT++ A R+S  K++  +   Y+   RN P  +V+ F 
Sbjct: 12  LLPAFWVTIKLTIYSAIGAMIFGTILTAMRVSPVKILRTLSTAYINTVRNTPLTLVVLFC 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
              +   L +          +  NN  L+     + T
Sbjct: 72  SFGLYQNLGLTLAGRESSTFLVDNNFRLAVLGFILYT 108


>gi|114763148|ref|ZP_01442574.1| ABC transporter permease protein [Pelagibaca bermudensis HTCC2601]
 gi|114544201|gb|EAU47210.1| ABC transporter permease protein [Roseovarius sp. HTCC2601]
          Length = 223

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 14/190 (7%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R +  +  + L  +YI  F    +P LVL+ + Y             F+G       F
Sbjct: 47  MMRLYSVRPVQILTRIYIDVF--RSIPLLVLLIIVYY---------ALPFVG--VRLSPF 93

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S   AL+  + A+ AEI RSG+ A+P+GQ EAA ALGL HR+    V+LPQ++R +IPP
Sbjct: 94  ASAMTALTMVSGAYTAEIFRSGIEAIPKGQFEAAAALGLGHRQTMVDVILPQSIRMVIPP 153

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LT+  +N++K+++LA  V   DL+                ++    IYL+  + + L ++
Sbjct: 154 LTNNSINVVKDTALASVVAMPDLLKQATQAQALAANP-SPLIGAAAIYLAFLLPLVLLVS 212

Query: 387 RLNAKIALKE 396
           RL  ++   +
Sbjct: 213 RLERRLNRGK 222



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 43/83 (51%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++ +  + +   +     +L G   T  L  + ++   ++G  +   RL + + V  + R
Sbjct: 2   DLFETFLNFEVLARSFPMLLKGLWLTLKLGAASILAGLVLGLALCMMRLYSVRPVQILTR 61

Query: 131 VYVEVFRNIPPLVVIFFLYKSVL 153
           +Y++VFR+IP LV++  +Y ++ 
Sbjct: 62  IYIDVFRSIPLLVLLIIVYYALP 84


>gi|260550663|ref|ZP_05824872.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
 gi|260406374|gb|EEW99857.1| glutamate/aspartate transporter [Acinetobacter sp. RUH2624]
          Length = 280

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLP 233
              + T    F+ +F+LG +L +  T  ++      + + +  + +PL+    F  F  P
Sbjct: 56  FTMVWTAVVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFP 115

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                 L   L      +    +          +    AL  YTAA ++E VR+G+  V 
Sbjct: 116 E----FLPDSLSAGSGDVVAGGWWKNILNHHPAVIGVFALGLYTAARVSEHVRAGINTVS 171

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +  
Sbjct: 172 RGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 231

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 232 KTMREETSQDIIILILSTPVYLIITYTIKFVMAWIEKRMAV 272



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y+   ++   +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FR
Sbjct: 40  AYSEAPTWLQMLGSGVFTMVWTAVVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFR 99

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           NIP +V +FF        LP       L  G      G  +  +     A I VF+  L
Sbjct: 100 NIPLIVQLFFWAFVFPEFLPD-----SLSAGSGDVVAGGWWKNILNHHPAVIGVFALGL 153


>gi|323698174|ref|ZP_08110086.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458106|gb|EGB13971.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 364

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 18/224 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++        L++   A   + S   GI+L+L      R        ++ +  I      
Sbjct: 150 VDQSMWGGLMLSLGLAAVGIILSVPFGILLAL-----GRQSRMVGVSSVCVGLIELIRGV 204

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L T++ +A    +    PV  Q N           + + + +  +++A+IAE+VR GL 
Sbjct: 205 PLITILFMASV-MMPLFLPVNLQIN---------NLLRVQVGIILFSSAYIAEVVRGGLQ 254

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ++AA ALGL+    T  V+LPQA+R ++P L  + + L K++SL + VG  D +
Sbjct: 255 AVPGGQLDAAKALGLSPWMITLFVVLPQALRYVLPALIGRCIALFKDTSLVIIVGLLDFL 314

Query: 351 SVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +           G  +E  +    +Y  +   ++ +   L  +
Sbjct: 315 GMAKAASQDQHWLGHEVEGYVFCAVVYWCICFGMSRYGRSLEKR 358


>gi|56808075|ref|ZP_00365870.1| COG0765: ABC-type amino acid transport system, permease component
           [Streptococcus pyogenes M49 591]
          Length = 219

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + + S  LG +L+            K  +    LY+  +++ G P L
Sbjct: 18  LDGALVTLQVFFIVIILSIPLGAILAFLM-----KIPFKPLQWFLTLYV--WMMRGTPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 71  LQLIFFYYV-----------LPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 120 QYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +   ++  + 
Sbjct: 180 AANRDA-TLAPMFIAGLIYLLLIGLVTIISKQVEKRF 215



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  +I +  +G ++        K + W   +YV + R  P L+ + F 
Sbjct: 17  LLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFF 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D          LN              A 
Sbjct: 77  YYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAI 116


>gi|125973969|ref|YP_001037879.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum ATCC 27405]
 gi|256005805|ref|ZP_05430757.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 2360]
 gi|281418129|ref|ZP_06249149.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum JW20]
 gi|125714194|gb|ABN52686.1| amino acid ABC transporter membrane protein, PAAT family
           [Clostridium thermocellum ATCC 27405]
 gi|255990251|gb|EEU00381.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 2360]
 gi|281409531|gb|EFB39789.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum JW20]
 gi|316939833|gb|ADU73867.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium thermocellum DSM 1313]
          Length = 220

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 96/212 (45%), Gaps = 13/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 +F+  LG++++     +SR +  +      L+    ++I G P ++ + + +  
Sbjct: 21  LFILTLLFALPLGMIIAF--GSMSRFYPLRW-----LVRTFVWVIRGTPLMLQLIIIFF- 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L    F   S  S  F++  +A     A + +EI R G+ ++P GQ EA   LG
Sbjct: 73  ---GPGLLNMPFSWPSGESGRFVAATVAFVINYACYFSEIYRGGIESIPVGQYEAGQVLG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +    V L Q ++ I+PP+ ++ + L+K++SLA  +   +++ + G   N+    I
Sbjct: 130 MTKTQIFFHVTLLQVIKRIVPPIGNEVITLVKDTSLARIIANKEIIMMAGEYSNK--GLI 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +      +L     + + +N +  K+    
Sbjct: 188 WPLFATGIYFLVFVGGLTILLNWVEKKLGYFR 219


>gi|317053174|ref|YP_004119528.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953501|gb|ADU72972.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 222

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 103/226 (45%), Gaps = 14/226 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +    F     L +       + ++ V +F  G+V+++  T + R+  +  GK      I
Sbjct: 1   MNLNFFPILDQLPYLLGGAWISLQLAVLAFAFGMVIAMICTSILRYGPKLAGK-----CI 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           + +++F   T   +   Y L F  P +          +   F ++ I  +    A++ EI
Sbjct: 56  NAYVVFATNT-PQLVQIYFLFFALPEV--------GILLSPFTAVLIGATFNAGAYLCEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G  +V R ++EAA  LG +  +  R V+LP  ++ +  PL++Q++ +   +S+A   
Sbjct: 107 QRAGFDSVRRMEIEAAEVLGFSRVQIIRYVILPHVIKVMFRPLSNQFIVMTLGTSMASMF 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           G  +L      + +QT  ++E   +   IY++++I+    +  +  
Sbjct: 167 GVEELTGRTYNLSSQTYLSVESFSVAAVIYIAITIVATFALAIMGR 212


>gi|295698918|ref|YP_003606811.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438131|gb|ADG17300.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 248

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 2/180 (1%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             +   +    +  PLL    F  FG  TL+       L  +       +    +  S E
Sbjct: 50  ARAAALYVLAFRNSPLLVQLLFWYFGAATLLPQPWMEWL--NASHTVSLSGWTIAWPSFE 107

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++ ++ L+CYT AF+ E  R+G+  V   Q +AA ALGLT   A R V+LPQA+R   P
Sbjct: 108 FVAGWVGLTCYTTAFVGEEFRAGMRGVNDAQHQAAAALGLTPLAAFRYVILPQAIRIATP 167

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  QY+NL+KNSSLA+ +G A+L  V   +  +T +  +       +Y+++  +I   +
Sbjct: 168 PLAGQYMNLVKNSSLAMTIGLAELSYVSRQVDTETFKTFQAFGAATVLYIAIIAVIEAVL 227



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 36/79 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  GF+ T  L+      AT+ G  +   R + N ++A    +YV  FRN P LV 
Sbjct: 9   YLGWIAHGFLMTLVLSACAGAAATLAGFGLALARNARNGMLARAAALYVLAFRNSPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y    ++LP P    
Sbjct: 69  LLFWYFGAATLLPQPWMEW 87


>gi|261343376|ref|ZP_05971021.1| arginine ABC transporter, permease protein ArtM [Providencia
           rustigianii DSM 4541]
 gi|282568516|gb|EFB74051.1| arginine ABC transporter, permease protein ArtM [Providencia
           rustigianii DSM 4541]
          Length = 222

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 94/223 (42%), Gaps = 10/223 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     ++       + +F+L I+ +L           KT      + +   L  G P L
Sbjct: 9   LPGLPTSLSLTFSALLVAFILAILFTLI-------LSLKTPVVSQAVKVYITLFTGTPLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L Y        L  +  +     +P ++   +AL+  +AA+   +    + A+P G
Sbjct: 62  VQFFLIYNGPSQFKSLQDYPALWEFISTP-WVCAMVALALNSAAYSTLLFHGAVKAIPSG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q ++  ALG++  +    ++LP A +  +   +++ + + K++SLA  +   D++     
Sbjct: 121 QWQSCQALGMSKLQTM-RIILPYAFKRSLSSYSNEVVLIFKSTSLASTITMLDIMGYSSQ 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  QT   +   +    IYL ++ ++ + M  +  K    E++
Sbjct: 180 VFGQTWDVM-AFVAAGIIYLVVNAILTIVMRLIERKALAFEQR 221


>gi|126731769|ref|ZP_01747573.1| probable ABC transporter permease protein [Sagittula stellata E-37]
 gi|126707596|gb|EBA06658.1| probable ABC transporter permease protein [Sagittula stellata E-37]
          Length = 364

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 106/235 (45%), Gaps = 14/235 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L  G+F      S     +     +F  + ++G+ +++    L R       K + +++I
Sbjct: 140 LFGGVFGMPFVPSTDWGGLPLTMILFSGTVLIGMPVAVLL-ALGRRSPLPVAKGVSVVFI 198

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                  L T++ +A          V     F+       + + + + ++ + A + AE+
Sbjct: 199 EALRGVPLITILFVA----------VNVFPLFLPAGVEVNKLLRITVGIAVFFACYQAEV 248

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL A+P GQ EAA +L LT+ + TR ++LPQA+R  +P +T+  +  +KN+S  + +
Sbjct: 249 IRGGLQAIPTGQYEAADSLNLTYWQTTRRIILPQALRISLPAITNHIIAAMKNTSFVIII 308

Query: 345 GFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           G  D+++    ++         +E  L    IYL     ++L+  ++   I    
Sbjct: 309 GLFDILTATTAVMQDPLWRRYYVEAYLFVAAIYLFFGYALSLYARQVEKWINQGR 363


>gi|114766876|ref|ZP_01445798.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Pelagibaca bermudensis HTCC2601]
 gi|114540922|gb|EAU43982.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Roseovarius sp. HTCC2601]
          Length = 438

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 18/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +    L M         S  LGIVL+L      R           +++I   +I G+P
Sbjct: 227 NDMGGFMLAMIIGVSGIALSLPLGIVLAL-----GRQSDLFIINKCSVIFIE--VIRGVP 279

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V +            L    F+   T     + + I ++ +++A+IAE+VR GL A+P
Sbjct: 280 LIVWLF--------TASLLLNYFLPPGTNFDLMLRVIIMVTLFSSAYIAEVVRGGLAALP 331

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA ALGL + K+ RL++LPQA++  IP + + ++ L K+++L V +G  D + + 
Sbjct: 332 KGQYEAADALGLDYWKSMRLIILPQALKISIPGIVNTFIGLFKDTTLVVFIGLLDPIGLS 391

Query: 354 GTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I   T   G   E+ +     +      +  +   L  K+  + +
Sbjct: 392 NAIRASTDWNGIYWELFVFIGLCFFIFCFSMGRYSLFLEKKLRREHR 438



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 35/74 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+    +  SG+  +  +G ++  GR S   ++     +++EV R +P +V +F     
Sbjct: 231 GFMLAMIIGVSGIALSLPLGIVLALGRQSDLFIINKCSVIFIEVIRGVPLIVWLFTASLL 290

Query: 152 VLSVLPIPDHSIVL 165
           +   LP   +  ++
Sbjct: 291 LNYFLPPGTNFDLM 304


>gi|152986056|ref|YP_001348447.1| putative amino acid permease [Pseudomonas aeruginosa PA7]
 gi|150961214|gb|ABR83239.1| probable amino acid permease [Pseudomonas aeruginosa PA7]
          Length = 238

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 10/187 (5%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF--DKPVLGQFNFIGGSTVS 263
                 +    +  PLL    F  FG+P L+   L   L+   + P+L   +F       
Sbjct: 51  SWPARAYLALFRNTPLLVQLFFWYFGVPALLPEELVSWLNTPHETPLLDWPSF------- 103

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
            EF++    L+ YT+AF+AE  R+G+ +V   Q  A +ALGLT R+  R+V+LPQA+R+ 
Sbjct: 104 -EFLAGAWGLTLYTSAFVAEEFRAGIASVRPEQRAAGLALGLTQRQVWRVVVLPQALRTA 162

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +PPL  QY+N LKNSSLA+A+G A+L      +  +T +  +   I   +Y+    +I  
Sbjct: 163 LPPLLGQYMNALKNSSLAMAIGLAELSYASRQVETETFKTFQAFGIATLLYIGAIALIEA 222

Query: 384 FMNRLNA 390
           F   L  
Sbjct: 223 FGQALQQ 229



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 53/112 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L GF+ T  L+    + AT++G  +   RLS  +L++W  R Y+ +FRN P LV
Sbjct: 9   QYLRWLLDGFLLTLGLSLLSCLLATLVGAPLAIARLSRRRLLSWPARAYLALFRNTPLLV 68

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
            +FF Y  V ++LP    S +            SF  L       ++  +FV
Sbjct: 69  QLFFWYFGVPALLPEELVSWLNTPHETPLLDWPSFEFLAGAWGLTLYTSAFV 120


>gi|239945338|ref|ZP_04697275.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239991795|ref|ZP_04712459.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291448800|ref|ZP_06588190.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
 gi|291351747|gb|EFE78651.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
          Length = 214

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++  L +VL        R     + + L  ++++      L  L    L     F
Sbjct: 19  VELTVYASALALVLGFLMASF-RVAPVGSFRVLGTVWVTVLRNTPLTLLFFAVLLGLPRF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +  Q                 IAL CYT+AFI E++RSG+  VP+GQ EAA +LG+ 
Sbjct: 78  GLVLPFQLF-------------AVIALGCYTSAFICEVLRSGINTVPKGQGEAARSLGMN 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA RS+IPP+ S  + L KNS++A A    +L+    T+       I  
Sbjct: 125 FGQTLSTVVLPQAFRSVIPPVGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSIIWS 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+   N +  +  +  
Sbjct: 185 FIWIAVGYLIITLTISAVFNVMEKRWGVAR 214



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L       A ++G L+ + R++       +  V+V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASALALVLGFLMASFRVAPVGSFRVLGTVWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|85703853|ref|ZP_01034956.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. 217]
 gi|85671173|gb|EAQ26031.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius sp. 217]
          Length = 429

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 19/228 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R +    + +         S  LGI+L+L      R       K + +++I       L 
Sbjct: 217 RDMGGFMINLMLGVVCVSLSLPLGILLAL-----GRQSSMPIIKWICVVFIEFIRGVPLI 271

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           T     + + I ++ +++A+IAE++R GL A+P
Sbjct: 272 TLLFVANVVLAYFLPP----------GTNFDLILRVIIMITMFSSAYIAEVIRGGLAALP 321

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA  +LGL + ++ +L++LPQA++  IP + +  + L K+++L   +   D+V + 
Sbjct: 322 RGQYEAGDSLGLDYAQSMQLIILPQALKISIPGIVNVAVGLFKDTTLVSVISMFDIVGMI 381

Query: 354 G----TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                      G   E+      ++      I+ +   L  ++    +
Sbjct: 382 RGPILASSEWNGVYWELFGFACVLFFITCYGISQYSQWLERQLRTDHR 429



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 36/74 (48%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+    L    +  +  +G L+  GR S+  ++ WIC V++E  R +P + ++F     
Sbjct: 221 GFMINLMLGVVCVSLSLPLGILLALGRQSSMPIIKWICVVFIEFIRGVPLITLLFVANVV 280

Query: 152 VLSVLPIPDHSIVL 165
           +   LP   +  ++
Sbjct: 281 LAYFLPPGTNFDLI 294


>gi|295836168|ref|ZP_06823101.1| glutamate permease [Streptomyces sp. SPB74]
 gi|295825886|gb|EDY42198.2| glutamate permease [Streptomyces sp. SPB74]
          Length = 227

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 10/236 (4%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +  + F        L    +T+   A   V S + G VL+       R       +   
Sbjct: 2   EAREIVFDFLDGYDLLGAFWVTVKLTALSAVGSLIWGTVLAAM-----RVGPVPLMRGFA 56

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             YI+      L  +++                 N       +  F    + L  YT+ F
Sbjct: 57  TGYINIVRNIPLTVIIVFT-----SLGLSQTLSINLGASDFKTINFRLAVLGLILYTSTF 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E VRSG+  VP GQ EAA ALGL  R+   L++LPQA RS++ PL +  + L KN+++
Sbjct: 112 VCEAVRSGINTVPMGQAEAARALGLNFRQVLTLIILPQAFRSVVNPLANVLIALTKNTTI 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A A+G  +   +   +I    + + I L++ F ++ L++   L +  ++ K+A+K 
Sbjct: 172 AAAIGVGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVSKKVAIKR 227



 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     + + I GT++ A R+    L+      Y+ + RNIP  V+I F 
Sbjct: 16  LLGAFWVTVKLTALSAVGSLIWGTVLAAMRVGPVPLMRGFATGYINIVRNIPLTVIIVFT 75

Query: 149 YKSVLSV 155
              +   
Sbjct: 76  SLGLSQT 82


>gi|227514608|ref|ZP_03944657.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087019|gb|EEI22331.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 234

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 99/216 (45%), Gaps = 4/216 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + + V+G++L++    + R    K     P++ +    + G P +V + + Y 
Sbjct: 19  PVTLLIAIVAAVVGLLLAILV-AVVRERQVKVLA--PIVAVIVSFVRGTPIIVQLYVVYY 75

Query: 244 -LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L     V+  + +       P  +  + A S    A ++E +RS   AV  GQ EAA+A
Sbjct: 76  GLPQLLVVMKGWGWNTNPNGLPALVIAFTAFSLNVMANLSESIRSAYHAVDYGQYEAAVA 135

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+T  +A   +++PQ + ++IP  T+ +L+L+K+++L   +G  +++     I     +
Sbjct: 136 VGMTPLRAIIQIVVPQLIANLIPNFTNIFLDLIKDTALVYNIGIVEIMGEANIISAIGFK 195

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +E  +  + IY+ +    A     +   I     +
Sbjct: 196 YLETYVDALIIYIIICWFFAKLFQVIELIIRRSSSR 231


>gi|319899030|ref|YP_004159123.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
 gi|319402994|emb|CBI76549.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
          Length = 235

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 5/215 (2%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                K+   S  +G++L +  T   R  + K  + L   YI  F     P L  + L Y
Sbjct: 26  FIVTLKLVSISCSMGLLLGILIT-FIRLSNNKILQYLARAYIYFF--RSSPLLAQLFLFY 82

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                     +   +     +  +  L+I  S  +AA+ AEI R  L+AV   Q EA+ A
Sbjct: 83  YGLGSLNNFWEQIGLWWFFQNAWYCCLFI-FSLNSAAYQAEIFRGSLLAVATEQREASKA 141

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL+       ++LPQAM + + PL ++++ + K+S++A  V   DL+     I ++T  
Sbjct: 142 LGLSRSITFFKIILPQAMVTALRPLGNEFILMTKSSTIASLVTVYDLMGTTKLIYSRTFD 201

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             ++ +    IYL +  +I  F+  +   +    +
Sbjct: 202 -FQVYIWVAIIYLIIVELIHRFIILIEHYLTRYLR 235



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S Y+  ++ GF+ T  L         ++G L+   RLS NK++ ++ R Y+  FR+ P L
Sbjct: 16  SRYSLKLIDGFIVTLKLVSISCSMGLLLGILITFIRLSNNKILQYLARAYIYFFRSSPLL 75

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
             +F  Y  + S+    +   +  F        L   +L             +L + 
Sbjct: 76  AQLFLFYYGLGSLNNFWEQIGLWWFFQNAWYCCLFIFSLNSAAYQAEIFRGSLLAVA 132


>gi|298486824|ref|ZP_07004880.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298158691|gb|EFH99755.1| Amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 227

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 43  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 89

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 90  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPF 149

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP  +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 150 MIPPTGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMTWPLS 209

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 210 WLVKRYEQH 218



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATII--GTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            A  +  G   T  +     +   ++    ++   RLS  + + W   VYVEV R I  L
Sbjct: 14  IARQLAHGAWITLQITVLAELLVLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISAL 73

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           V++F+L+  +               G+
Sbjct: 74  VLLFYLFFILPLFGIRLSPMTTGVLGL 100


>gi|298294126|ref|YP_003696065.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930637|gb|ADH91446.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 242

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 8/214 (3%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                F F+FV G+++ +     +R              +   +  G+PTL++I L +  
Sbjct: 26  LFLASFAFAFVFGVLIGVATLSRNRLLQ-------AAWRVYASIFMGVPTLLVIFLVFYG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +      +G       F +   AL+   AA+IAE+VR  +  +P+GQ E A AL 
Sbjct: 79  G-SAMLAAVLGELGSEIDISPFGAGVTALAVVYAAYIAELVRGAIENLPKGQFEGARALA 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +        V+LPQ MR  +P L + +  +LK + L    G  DLV+        T +  
Sbjct: 138 IPPIIMWGKVILPQVMRLALPGLVNVWSFMLKETPLVSLAGLQDLVAASKIAAGATKEPF 197

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +    ++++ S         L  ++    ++
Sbjct: 198 VFFIATALVFIAFSAATLKLATILEIRLDRGLRR 231



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G + T  L  +    A + G L+G   LS N+L+    RVY  +F  +P L+V
Sbjct: 12  YLRQLGEGALITLELFLASFAFAFVFGVLIGVATLSRNRLLQAAWRVYASIFMGVPTLLV 71

Query: 145 IFFLYKSV 152
           IF ++   
Sbjct: 72  IFLVFYGG 79


>gi|268590213|ref|ZP_06124434.1| arginine ABC transporter, permease protein ArtM [Providencia
           rettgeri DSM 1131]
 gi|291314494|gb|EFE54947.1| arginine ABC transporter, permease protein ArtM [Providencia
           rettgeri DSM 1131]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 93/223 (41%), Gaps = 10/223 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     ++       + +F+L I+ +L           KT      + I   L  G P L
Sbjct: 9   LPGLPTSLSLTFSALIVAFILAILFTLV-------LSLKTPVVSQAVKIYITLFTGTPLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L Y        L  +  +     +P ++   +AL+  +AA+   +    + A+P G
Sbjct: 62  VQFFLIYNGPSQFKSLQDYPMLWEIISTP-WICAMVALALNSAAYSTLLFHGAVKAIPSG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q ++  ALG++  +    ++LP A +  +   +++ + + K++SLA  +   D++     
Sbjct: 121 QWQSCQALGMSKMQTM-RIILPYAFKRSLSSYSNEVVLIFKSTSLASTITMLDVMGYSQL 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           I  Q+   +   +    IYL ++ ++ + M  +  K    E +
Sbjct: 180 IFGQSWNVM-AFVAAGIIYLVVNAILTVLMRLIERKALEFEHR 221


>gi|319408408|emb|CBI82063.1| ABC transporter, permease protein [Bartonella schoenbuchensis R1]
          Length = 235

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 5/240 (2%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           +    +  PF     N         +    ++   S  +G  L +  T L+     K  +
Sbjct: 1   MFPEWLHFPFNTEFLNHYGPRFIDGLIITLELTFISCFIGFFLGILIT-LAHLSSNKPLQ 59

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            L   Y   F   G P L  + L Y          Q   +     S  +  L+I  +  +
Sbjct: 60  YLSRAYTYFF--RGSPLLAQLFLFYYGLGSMSDFWQKIGLWWFFQSAWYCCLFI-FALNS 116

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA+ A+I      +V  GQ EA+ ALGL++      +L+PQAM   + PL ++++ ++K+
Sbjct: 117 AAYQAKIFIGSFQSVATGQHEASKALGLSNSTTFFRILIPQAMILALRPLGNEFILIIKS 176

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           S++A  V   DL+ +   I  +T    ++ +    IYL +  +I  F+  +  ++    +
Sbjct: 177 SAIASLVTIYDLMGIAKLIYARTFD-FQVYVWVAIIYLFIVELIHGFIVLIERRLTRHLR 235



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 1/111 (0%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G + T  L F        +G L+    LS+NK + ++ R Y   FR  P L  
Sbjct: 18  YGPRFIDGLIITLELTFISCFIGFFLGILITLAHLSSNKPLQYLSRAYTYFFRGSPLLAQ 77

Query: 145 IFFLYKSVLSV-LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +F  Y  + S+        +   F          F   +    AKIF+ SF
Sbjct: 78  LFLFYYGLGSMSDFWQKIGLWWFFQSAWYCCLFIFALNSAAYQAKIFIGSF 128


>gi|291550028|emb|CBL26290.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Ruminococcus torques L2-14]
          Length = 228

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 9/206 (4%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
             F+ +LG +            H K    +    I  +++ G P ++ + + Y      P
Sbjct: 25  LFFATLLGAIPLGLVIAFGSMSHFKPLSYI--TNIIVWIVRGTPLMIQMLIIYYF----P 78

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L   N I G   S  F++  +A     A + + I R G+  +P+GQ EA + LG+T  +
Sbjct: 79  GLVLGNPIWGGGESGRFLAASVAFIFNYACYFSVIYRGGIQGIPQGQTEAGLVLGMTKHQ 138

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEI 366
               V L Q ++ I+PP++++ + L+K++SLA  +   +++  G   +  +     AI  
Sbjct: 139 IFFKVKLLQMVKRIVPPMSNEIITLVKDTSLARIIALQEIIWAGQAFLKGSQGISGAIWP 198

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
           +    F YL  + ++ + + +L  K+
Sbjct: 199 MFFTAFYYLIFNGILTVLLGKLEKKL 224



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 36/71 (50%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
           VGF+ T  L F+ ++ A  +G ++  G +S  K +++I  + V + R  P ++ +  +Y 
Sbjct: 17  VGFLQTLKLFFATLLGAIPLGLVIAFGSMSHFKPLSYITNIIVWIVRGTPLMIQMLIIYY 76

Query: 151 SVLSVLPIPDH 161
               VL  P  
Sbjct: 77  FPGLVLGNPIW 87


>gi|227873564|ref|ZP_03991806.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Oribacterium sinus F0268]
 gi|227840588|gb|EEJ50976.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Oribacterium sinus F0268]
          Length = 217

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 18/232 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + + F        +    LT+       +FS ++G+  SL         + K      ++
Sbjct: 1   MDIAFIKQYIPMYVEAGKLTLGIAFLGILFSLLIGLAASLI-------LYYKIPFWRRVV 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +   L    P LV +   + L+F  P L               +   I LS    A++ 
Sbjct: 54  QVYVELSRNTPLLVQL---FFLYFGLPKL--------GIRFSSELCGVIGLSFLGGAYMT 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL  V + Q E+A +LGL+  +  R V+ PQA+   IP + +  + L+K +S+  
Sbjct: 103 EAFRSGLSTVQKIQKESAQSLGLSKGQIMRYVIFPQALSVSIPAIVANMIFLIKETSVFS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +  ADL+ V   +I    +  E +L+ +  YL + + +++  N L  ++ +
Sbjct: 163 GIALADLMYVSKDLIGLYYKTEEALLMLVISYLIMLLPLSILGNVLERRMRI 214



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +AF G++ + +IG                + +VYVE+ RN P LV +FFLY  +  +
Sbjct: 20  TLGIAFLGILFSLLIGLAASLILYYKIPFWRRVVQVYVELSRNTPLLVQLFFLYFGLPKL 79

Query: 156 LPI 158
              
Sbjct: 80  GIR 82


>gi|78779549|ref|YP_397661.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           MIT 9312]
 gi|78713048|gb|ABB50225.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Prochlorococcus marinus str. MIT 9312]
          Length = 343

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 30/233 (12%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL------FATRLSRHFHEKTGKALPLLYI 224
           +  R     TLT+   +   +FS  +GI+L+L      F  + S   +    +A+PL+ +
Sbjct: 128 VMTRHWGGLTLTILITSCSILFSLPIGILLALCRRSSIFLIQKSSSLYIDVMRAVPLISV 187

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F       L+ + L   L  D                       IA + + +A+IAE 
Sbjct: 188 LFF----GQLLIPLFLPVGLEID-----------------RVWRAVIAFTFFVSAYIAED 226

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           ++ GL ++P+ Q+EAA +LGL   +    +L+PQA+R  +P +T+Q + L +N+SL   +
Sbjct: 227 IKGGLQSIPKNQIEAAKSLGLNKYQINIYILIPQALRVALPAITNQLIGLFQNTSLMAIL 286

Query: 345 GFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  +L+ V  +I+      GQ IE+ +    +Y     ++A    +L  K+ +
Sbjct: 287 GLMELLGVSRSILANPEFIGQYIEVYIWLASVYWLFCTIMAFVSKKLEQKMTI 339



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 5/198 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   T  +    ++ +  IG L+   R S+  L+     +Y++V R +P + V+FF  
Sbjct: 133 WGGLTLTILITSCSILFSLPIGILLALCRRSSIFLIQKSSSLYIDVMRAVPLISVLFFGQ 192

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +   LP+      +   +      +S             +    +    SL   +   
Sbjct: 193 LLIPLFLPVGLEIDRVWRAVIAFTFFVSAYIAEDIKGGLQSIPKNQIEAAKSLGLNKYQI 252

Query: 210 HFHEKTGKAL-----PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           + +    +AL      +      L      + ++ L   L   + +L    FIG      
Sbjct: 253 NIYILIPQALRVALPAITNQLIGLFQNTSLMAILGLMELLGVSRSILANPEFIGQYIEVY 312

Query: 265 EFMSLYIALSCYTAAFIA 282
            +++    L C   AF++
Sbjct: 313 IWLASVYWLFCTIMAFVS 330


>gi|27382710|ref|NP_774239.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27355882|dbj|BAC52864.1| amino acid ABC transporter permease protein [Bradyrhizobium
           japonicum USDA 110]
          Length = 243

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 2/237 (0%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            ++          N  G       + +   + + + VL  +++L    L         KA
Sbjct: 1   MNYHWNWGIFFEPNPMGTGTYLDMLLSGLVLTLKTAVLAWIIALVFGSLVGVMRTLPSKA 60

Query: 219 LPLL-YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                +        +P LV + L + +  +        ++     +P F +  I +  + 
Sbjct: 61  AYRFGFCWVEFFRNMPLLVQLFLWFFVLPELLPKSAGLWLKQLPNAP-FWTAAIGIGFFM 119

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A +A  +++G+ ++PRGQ  AA ALGLT  +  R VLLP A R I+PPLTS++LN +KN
Sbjct: 120 SARVAVQLQAGIGSLPRGQKMAATALGLTTVQGYRYVLLPMAFRIILPPLTSEFLNTIKN 179

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +++A+ +G  +L     ++   + Q  E       +YL ++ ++   M  L   +A+
Sbjct: 180 TAVAITIGLIELTGQARSMQEFSFQVFEAFTAATILYLLVNAVVVTAMRFLERYVAI 236



 Score = 56.1 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 36/82 (43%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +Y   +L G V T   A    I A + G+LVG  R   +K        +VE FRN+P 
Sbjct: 18  TGTYLDMLLSGLVLTLKTAVLAWIIALVFGSLVGVMRTLPSKAAYRFGFCWVEFFRNMPL 77

Query: 142 LVVIFFLYKSVLSVLPIPDHSI 163
           LV +F  +  +  +LP      
Sbjct: 78  LVQLFLWFFVLPELLPKSAGLW 99


>gi|330831198|ref|YP_004394150.1| ABC-type arginine transporter, permease [Aeromonas veronii B565]
 gi|328806334|gb|AEB51533.1| ABC-type arginine transporter, permease protein [Aeromonas veronii
           B565]
          Length = 220

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 14/199 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIVL+   T +      +   A  L+ +   L  G P L+ I L Y         GQF +
Sbjct: 26  GIVLAALMTWV---LELRLPVATQLVQLWVLLFTGTPLLIQIFLIYYGP------GQFEW 76

Query: 257 IGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           +  S + P     +    +AL   TAA+   + +  L A+P G++EA  ALG   R+   
Sbjct: 77  LKASPLWPLLKQPWFCAVLALGLNTAAYSTRLFKGALDAIPAGEVEACRALGFNGRQTLW 136

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            + +  A R ++P  +++ + +LK SSLA  +   D++ +   +  QT   + +  +   
Sbjct: 137 -MKVRHAARHLVPAYSNEVILVLKGSSLASTITIMDIMGLAQGLNAQTYDTLAVFGVAGG 195

Query: 373 IYLSLSIMIALFMNRLNAK 391
           +YL+++ ++ +       +
Sbjct: 196 LYLAMNGLLTIGFRWCEKR 214


>gi|311103232|ref|YP_003976085.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 2 [Achromobacter
           xylosoxidans A8]
 gi|310757921|gb|ADP13370.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 2
           [Achromobacter xylosoxidans A8]
          Length = 220

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 84/166 (50%), Gaps = 7/166 (4%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              + G   + LI + +  +F  P++                S  IA + + AA+ +EI+
Sbjct: 58  AVYVNGFRAVPLILVIFWFYFLVPLIVG-------KPVGALPSALIAFTLFEAAYYSEII 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL +V  GQ +AA A GL+  +A R V+LPQA+R+++P L +Q + L +++SL   + 
Sbjct: 111 RAGLQSVRSGQWQAAAASGLSRAQALRFVVLPQALRNMMPVLITQAIVLFQDTSLVYVIS 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             D ++    + N+  + IE+ L    +Y  L   ++L  +    +
Sbjct: 171 LRDFMTSTSIVANRDNRLIEMYLFAALVYFVLCASLSLAAHLAAKR 216


>gi|242238357|ref|YP_002986538.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech703]
 gi|242130414|gb|ACS84716.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 14/209 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + + G+ + +    L         +   L      LI   
Sbjct: 11  WPYWPELLAGLWVTIELTVMATLGGVAIGVLGAALRSGRPTLISR---LWGWYVELIRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +               F   G         +  +A+     A+  EI+R+G+   
Sbjct: 68  PFVVQLFFI-----------VFGLPGLGLKLNAGQAALLAMLVNLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V F +L   
Sbjct: 117 PKGQWEAARVLGLTKTQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSFEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMI 381
              I ++T  + E+ L+    YL+LS+++
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLFYLALSMLM 205



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G   T  L     +    IG L  A R     L++ +   YVE+ 
Sbjct: 5   LHFAALWPYWPELLAGLWVTIELTVMATLGGVAIGVLGAALRSGRPTLISRLWGWYVELI 64

Query: 137 RNIPPLVVIFFLYKSVL 153
           RN P +V +FF+   + 
Sbjct: 65  RNTPFVVQLFFIVFGLP 81


>gi|296156735|ref|ZP_06839573.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893334|gb|EFG73114.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 220

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 15/214 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A +      LG+V  + A   ++       K + L Y+          LV ++     
Sbjct: 21  VTALVSAIGIPLGVVAGIVAAYAAQSR--TFLKPVALAYVELVRNIPYLILVYLSF---- 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F        +            YT  + +EI+R+ L +VPRGQ +A+++LG
Sbjct: 75  ---------FGLPKLGIGASAMTVAIGCTVFYTGGYFSEILRAALRSVPRGQTQASLSLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R V+ PQ    + PP TS  + + K+S++   +   ++      +   T   +
Sbjct: 126 MTFWQTQRHVIAPQLFGYVTPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYV 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E++     IY   S+++A    RL   I  + + 
Sbjct: 186 EVLGTTALIYWICSVLLASVGRRLETAIGRRARH 219



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 1/85 (1%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++  G+    + G +      S   L   +   YVE+ RNIP L++++ 
Sbjct: 14  VLLDGLRVTALVSAIGIPLGVVAGIVAAYAAQSRTFL-KPVALAYVELVRNIPYLILVYL 72

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
            +  +  +        V        
Sbjct: 73  SFFGLPKLGIGASAMTVAIGCTVFY 97


>gi|158423073|ref|YP_001524365.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
 gi|158329962|dbj|BAF87447.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +    L IV+ +    L R       + L   ++   +I   P LV I   Y    
Sbjct: 25  FVLALGGMALAIVIGIGGVLL-RDSRHAPVRFLVKAFVE--VIRNTPFLVQIFFIY---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F             +  IAL     A+  EI+R G+ ++ RGQ+EA +ALGL 
Sbjct: 78  -------FALPLAGVRLDPTPTAIIALGINGGAYAIEIIRGGVQSISRGQVEAGLALGLH 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                RL++L  A+R++ P LTSQ++ L   +S+A A+   +L SV   I + + ++ E+
Sbjct: 131 KALVFRLIVLKPALRAVYPSLTSQFILLTLTTSIASAISAYELTSVAQRIESDSFRSFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                F+YL +S M+  F   ++A+ 
Sbjct: 191 FGTATFMYLVISWMMMRFFALISARY 216



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 42/84 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + TF LA  GM  A +IG      R S +  V ++ + +VEV RN P LV IFF+
Sbjct: 17  LLAGCLGTFVLALGGMALAIVIGIGGVLLRDSRHAPVRFLVKAFVEVIRNTPFLVQIFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y ++       D +      + +N
Sbjct: 77  YFALPLAGVRLDPTPTAIIALGIN 100


>gi|253689674|ref|YP_003018864.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756252|gb|ACT14328.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 221

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 14/219 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                    +    ++ V + + GI + +    L         +   L  I   LI   P
Sbjct: 12  PFWPELLAGLWVTIELTVMATLGGIAIGICGAALRSGKPTLLSR---LWGIYVELIRNTP 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +V +   + + F  P LG     G         +  +A+     A+  EI+R+G+   P
Sbjct: 69  FVVQL---FFIVFGLPSLGWKLTAGQ--------AALLAMLINLGAYSTEIIRAGIQVTP 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA  LGLT  +    V+LP A++ I P L SQ + ++  SS+   V + +L    
Sbjct: 118 KGQWEAARVLGLTRVQTFLRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             I ++T  + E+ L     YL+LS+++   +     + 
Sbjct: 178 NLIQSRTFLSFEVYLATTLCYLALSVLMRQLLLLAGRRF 216



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +++   +   +L G   T  L     +    IG    A R     L++ +  +YVE+ 
Sbjct: 5   LNFSALLPFWPELLAGLWVTIELTVMATLGGIAIGICGAALRSGKPTLLSRLWGIYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P +V +FF+   + S+
Sbjct: 65  RNTPFVVQLFFIVFGLPSL 83


>gi|254464505|ref|ZP_05077916.1| polar amino acid uptake family ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
 gi|206685413|gb|EDZ45895.1| polar amino acid uptake family ABC transporter, permease protein
           [Rhodobacterales bacterium Y4I]
          Length = 253

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 9/211 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T   I V S  LG +L++    L++             + +  +I G P L+ I L Y 
Sbjct: 47  WTTIWILVVSTFLGFLLAVPLG-LAQAVGPWYLSIPARTFCT--IIRGTPLLLQIWLLYY 103

Query: 244 LHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                 +  QF +I  S + P     +    +AL+   A +  E++R     V +GQ+EA
Sbjct: 104 G--LGSLFPQFPWIRSSELWPYLRQAWPYAVLALTLSYAGYEGEVMRGAFSGVAKGQLEA 161

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A + G+      R V LPQA+R+++P L  + +  LK + L   +   ++ +V   +   
Sbjct: 162 AKSFGMPRFTIFRRVWLPQAVRNVLPTLGGETILQLKATPLVATITVMEIYAVSSRVRAD 221

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           T    E +L+   +Y++++ +IAL   RL  
Sbjct: 222 TFIVYEPLLLLALVYMAIAGVIALAFRRLEK 252



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 31/93 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   L G   T W+         ++   +G  +      ++   R +  + R  P L+ 
Sbjct: 38  YAPLALEGLWTTIWILVVSTFLGFLLAVPLGLAQAVGPWYLSIPARTFCTIIRGTPLLLQ 97

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           I+ LY  + S+ P            +L      
Sbjct: 98  IWLLYYGLGSLFPQFPWIRSSELWPYLRQAWPY 130


>gi|237785697|ref|YP_002906402.1| glutamate ABC transporter permease [Corynebacterium kroppenstedtii
           DSM 44385]
 gi|237758609|gb|ACR17859.1| glutamate ABC transport system, permease protein [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 312

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 15/254 (5%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
            + +     +                     L     T+       + + +LG VL    
Sbjct: 36  GWTISVLAKNGQLEASKWDPFIKSTTWTTYILPGLWGTLKAAFVSIILAMLLGAVLGT-- 93

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
               R  H    + +  + +  F    +P L+L+   YQL  +  V          +   
Sbjct: 94  ---GRLHHRWIVRRICGVIVEFF--RAIPVLILMIFAYQLFAEYAVFP--------SEQL 140

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F ++   L+ Y  A IAE++RSG+ A+P GQ EAA+ALGLTHR+  R++LLPQA+ S++
Sbjct: 141 AFAAVVFGLTLYNGAVIAEVLRSGIEALPSGQSEAALALGLTHRQTMRIILLPQAVASML 200

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L +Q +  LK+S+L   +G+ ++V  G    +     +  +++   I + ++I +A F
Sbjct: 201 PALIAQMVIALKDSALGYQIGYVEVVRSGIQSASYYRNFLAALVVVAVIMIIVNIGLAKF 260

Query: 385 MNRLNAKIALKEKK 398
             R+  ++     +
Sbjct: 261 AERIELQLRAGRAR 274



 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 46/93 (49%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           P+   +++ T IL G   T   AF  +I A ++G ++G GRL    +V  IC V VE FR
Sbjct: 55  PFIKSTTWTTYILPGLWGTLKAAFVSIILAMLLGAVLGTGRLHHRWIVRRICGVIVEFFR 114

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
            IP L+++ F Y+        P   +     +F
Sbjct: 115 AIPVLILMIFAYQLFAEYAVFPSEQLAFAAVVF 147


>gi|167581947|ref|ZP_02374821.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis TXDOH]
          Length = 246

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 22/199 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V    LG+ L+L    L        G                  + ++ L +  +F  PV
Sbjct: 57  VLGVALGVALALATGALRGALIVVIG--------------FFRAIPVLMLIFWTYFLLPV 102

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   +        P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT R+ 
Sbjct: 103 LLHADV-------PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRRQT 155

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            R VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+      +I L 
Sbjct: 156 VRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNRLMVYPAQIFLF 215

Query: 370 WMFIYLSLSIMIALFMNRL 388
              IYL L   + +    L
Sbjct: 216 VGVIYLILCTALDVAATWL 234


>gi|53728960|ref|ZP_00348280.1| COG4160: ABC-type arginine/histidine transport system, permease
           component [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|126208815|ref|YP_001054040.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae L20]
 gi|190150672|ref|YP_001969197.1| arginine transporter permease ArtM [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307250611|ref|ZP_07532552.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307257418|ref|ZP_07539187.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307264020|ref|ZP_07545620.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126097607|gb|ABN74435.1| arginine transport system permease protein ArtM [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|189915803|gb|ACE62055.1| arginine transport system permease protein ArtM [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306857352|gb|EFM89467.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306864070|gb|EFM95984.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306870631|gb|EFN02375.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 227

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 10/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + +FVL ++L+   +  S+           ++     L  G P LV   L Y  
Sbjct: 19  LTAVSLLIAFVLAVILTFLLSMESKLIK-------AIVNGYLMLFTGTPLLVQFFLIY-- 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H         +      +S  +    +AL+  +AA+  ++    + A+P+GQ E   ALG
Sbjct: 70  HGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCAALG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       +L+P A+R  +P  +++ + + K +SLA  +   D++     +      AI
Sbjct: 130 LSRLDTL-KILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEYDAI 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 189 TIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|303328127|ref|ZP_07358566.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
 gi|302861953|gb|EFL84888.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Desulfovibrio sp. 3_1_syn3]
          Length = 230

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 14/203 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L                S  +G+VL +    +S+ +     + L  LY+  F   G+
Sbjct: 8   FNALPAILAGSFVTIGNVTASLAMGLVLGVPL-AVSQVYGGPWLRRLVALYVWFF--RGV 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+ L Y L           FI     +  F+   + L C + A+ ++I R  + ++
Sbjct: 65  PILVLLFLCYGL-----------FISLGLPADPFLICCLVLGCTSTAYQSQIFRGAIESL 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ++AA ALG+      R ++LPQA+R  IP   +++  LLK+S++   +G  D+++ 
Sbjct: 114 PQGQLKAARALGMNDFTGIRCIVLPQALRLSIPGWANEFSILLKDSAICYVLGTQDIMAR 173

Query: 353 GGTIINQTGQAIEIILIWMFIYL 375
              +  +T + + +      IY 
Sbjct: 174 TSFVAARTHEHLALYAAAGLIYF 196



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           AIL G   T     + +    ++G  +   ++     +  +  +YV  FR +P LV++F 
Sbjct: 13  AILAGSFVTIGNVTASLAMGLVLGVPLAVSQVYGGPWLRRLVALYVWFFRGVPILVLLFL 72

Query: 148 LYKSVLSV 155
            Y   +S+
Sbjct: 73  CYGLFISL 80


>gi|302537786|ref|ZP_07290128.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
 gi|302446681|gb|EFL18497.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. C]
          Length = 214

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++ +L +VL        R     + +    ++++      L  L    L     F
Sbjct: 19  VELTVYASLLALVLGFLMASF-RVAPVGSFRVFGTVWVTVLRNTPLTLLFFAVLLGLPRF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +  Q                 +AL CYT+AFI E +RSG+  VP+GQ EAA +LG++
Sbjct: 78  GLVLPFQLF-------------AVLALGCYTSAFICEALRSGINTVPKGQGEAARSLGMS 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA RS+IPP+ S  + L KNS++A A    +L+    T+       I  
Sbjct: 125 FGQTLGTVVLPQAFRSVIPPIGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSIIWT 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+   N L  +  +  
Sbjct: 185 FVWIAVGYLIITLSISAVFNVLEKRYGVAR 214



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A ++G L+ + R++          V+V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASLLALVLGFLMASFRVAPVGSFRVFGTVWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|254421950|ref|ZP_05035668.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
 gi|196189439|gb|EDX84403.1| ABC transporter, permease protein, putative [Synechococcus sp. PCC
           7335]
          Length = 240

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 93/230 (40%), Gaps = 14/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F   +                ++ + +   G+V+ +    L R    +    + L 
Sbjct: 17  MHYSFDFSVIWDNFGVLIAGAWLTLRLSLLAVAFGLVIGIIG-SLFRTSGNRLLNGIALA 75

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   +I   P L+ +   +   F  P L                +  ++L+    A+  
Sbjct: 76  YVE--IIRNTPYLIQLFFIF---FGLPAL--------GLKLSAEQAAIVSLAINFGAYST 122

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G+ ++P+GQ+EA +A+G       R +++P A+ +I   L  Q +  +  +S+  
Sbjct: 123 EIVRAGVESIPKGQVEAGLAIGFNKLDVFRHIVIPPALANIYSSLVGQVILAVLFTSVVS 182

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   DL   G  +  +T ++ EI      +YL++  ++      + A+ 
Sbjct: 183 QIAAEDLTYAGNYLDARTFRSFEIYFTLAILYLAIVWIVKALAYVIEARF 232



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 40/96 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++        ++ G   T  L+   +    +IG +    R S N+L+  I   YVE+ R
Sbjct: 22  DFSVIWDNFGVLIAGAWLTLRLSLLAVAFGLVIGIIGSLFRTSGNRLLNGIALAYVEIIR 81

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           N P L+ +FF++  + ++             + +N 
Sbjct: 82  NTPYLIQLFFIFFGLPALGLKLSAEQAAIVSLAINF 117


>gi|184155645|ref|YP_001843985.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|183226989|dbj|BAG27505.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
          Length = 229

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 19/226 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +  +  + V  F L  VL +    L R    +        YIS   + G+
Sbjct: 20  FDSLPTILSGLPMSLFLLVVCFALANVLGILIM-LMRTSSHRFLSWPARFYISF--LRGI 76

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV++ + Y                         +  ++ +   AAFIAE  RS  + V
Sbjct: 77  PMLVILFITYFGF----------------NMAALPAAILSFTIAPAAFIAEYYRSAFLGV 120

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA +LGL +      V+LPQA R  +P L +  L+L K +SLA  +  +++   
Sbjct: 121 DEGQFEAARSLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKGTSLAAMITVSEMFME 180

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +       + I ++   IY  +  +++   + L   +A   K+
Sbjct: 181 AKVVAGAAQDYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLATWSKE 226



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   + +L       A ++G L+   R S+++ ++W  R Y+   R IP LV++F  
Sbjct: 26  ILSGLPMSLFLLVVCFALANVLGILIMLMRTSSHRFLSWPARFYISFLRGIPMLVILFIT 85

Query: 149 YKSV 152
           Y   
Sbjct: 86  YFGF 89


>gi|237812178|ref|YP_002896629.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
 gi|254297702|ref|ZP_04965155.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|157806935|gb|EDO84105.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|237504085|gb|ACQ96403.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei MSHR346]
          Length = 247

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 63  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 116 HAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 175

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 176 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 212


>gi|126730763|ref|ZP_01746573.1| ABC-type amino acid transport system, permease component [Sagittula
           stellata E-37]
 gi|126708929|gb|EBA07985.1| ABC-type amino acid transport system, permease component [Sagittula
           stellata E-37]
          Length = 221

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 11/218 (5%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           +  +  D   K  + +   G+V+ + +         ++G     + +    + G    V 
Sbjct: 7   YAPILWDGFLKTLLVAAGAGVVMLVTSFAFGVAGVSRSGWLRWPIRVMVEFLRGTSAYVQ 66

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +   Y           F            +   I L     ++ +E+VR  +++VPR Q 
Sbjct: 67  LFWAY-----------FALPLFGIYIDAIIVGIIVLGLNVGSYGSEVVRGAILSVPRDQT 115

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E A+AL L+  ++ R V+LPQA+ S+IPP+ +  ++LLK + L   +  ADL      + 
Sbjct: 116 EGAVALNLSRFQSMRYVILPQALVSMIPPMGNLAIDLLKITPLVSLITIADLTFQAQVVR 175

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            QT   I I    + +Y  LS  +A    +  A  +  
Sbjct: 176 QQTNDTILIYGFVLVVYFILSSAVAHVFTKAGAHFSRG 213



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 35/88 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA  +  GF+ T  +A    +   +     G   +S +  + W  RV VE  R     V 
Sbjct: 7   YAPILWDGFLKTLLVAAGAGVVMLVTSFAFGVAGVSRSGWLRWPIRVMVEFLRGTSAYVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +F+ Y ++       D  IV    + LN
Sbjct: 67  LFWAYFALPLFGIYIDAIIVGIIVLGLN 94


>gi|171741233|ref|ZP_02917040.1| hypothetical protein BIFDEN_00307 [Bifidobacterium dentium ATCC
           27678]
 gi|283455404|ref|YP_003359968.1| putative Glutamate transport ATP-binding protein gluA
           [Bifidobacterium dentium Bd1]
 gi|306823530|ref|ZP_07456905.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Bifidobacterium dentium ATCC 27679]
 gi|309802946|ref|ZP_07697047.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171276847|gb|EDT44508.1| hypothetical protein BIFDEN_00307 [Bifidobacterium dentium ATCC
           27678]
 gi|283102038|gb|ADB09144.1| Putative Glutamate transport ATP-binding protein gluA
           [Bifidobacterium dentium Bd1]
 gi|304553237|gb|EFM41149.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Bifidobacterium dentium ATCC 27679]
 gi|308220413|gb|EFO76724.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 292

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 113/255 (44%), Gaps = 12/255 (4%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +V+  +    L + P         F        L      +  N K+ V + + G+ +  
Sbjct: 43  IVLAAIIVVGLEMSPGWPRVKETFFSPEYFAASLPEVLAGLWLNVKVLVVALI-GVAIFA 101

Query: 203 FATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
               L R  +      L +L  + T ++ G+P +V++   Y + F  P LG F  I  S 
Sbjct: 102 TLIALVRTSNNPVLFPLRVLAALYTTIMRGVPMIVVL---YLIGFGIPGLGIFGRIDPSL 158

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +        IA+    +A++AE++R+G   V   Q  +A +LGLT  + TR++++PQA+R
Sbjct: 159 L------GTIAVVMGYSAYVAEVLRAGFNDVHPSQRASARSLGLTAGQTTRMIVIPQALR 212

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + P L + ++++ K+  L   +G  D V      +  T       ++   +++ +S+  
Sbjct: 213 KVAPALMNDFISMQKDVGLISVLGAVDAVRAAQIEVASTYN-FTPYVVASLLFILMSVPF 271

Query: 382 ALFMNRLNAKIALKE 396
            L  +   A++  +E
Sbjct: 272 ILLNDWYTARLRKRE 286



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK---LVAWICRVYVEVFRNIPPLVVIF 146
           L G      +    +I   I  TL+   R S N     +  +  +Y  + R +P +VV++
Sbjct: 80  LAGLWLNVKVLVVALIGVAIFATLIALVRTSNNPVLFPLRVLAALYTTIMRGVPMIVVLY 139

Query: 147 FLYKSVLSVLPIPDHSIVLPFGM 169
            +   +  +         L   +
Sbjct: 140 LIGFGIPGLGIFGRIDPSLLGTI 162


>gi|313617523|gb|EFR89868.1| L-cystine transport system permease protein TcyM [Listeria innocua
           FSL S4-378]
          Length = 236

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 3/221 (1%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-L 235
                T+     +  F  + G ++++  T L R +H    + +   Y+S F        +
Sbjct: 14  MAMLKTIPLTLAMTFFPILFGFIIAILLT-LIRMYHVCFLEPIAKFYVSFFRSTPAILHI 72

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +LI L   L  D  +    +    +   P  + + IALS    A++ EI+RSG+IAV  G
Sbjct: 73  MLIYLGIPLIVDF-LSKSLDLSISANKIPVVVFVIIALSFTAGAYLTEILRSGIIAVDIG 131

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QMEAA ++G TH +A R VLLPQA  + +P  T+  +  L  +S+A  V   ++  +   
Sbjct: 132 QMEAAYSMGYTHGQAIRKVLLPQAFMTSLPNFTNLCIGFLHTTSIAAIVAVPEITGMATI 191

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +     +E  +    IY  L+I+I      L   IA  +
Sbjct: 192 VASDNYAFLEAFIGAALIYWFLTILIEAINYILEKNIAKYQ 232


>gi|256380866|ref|YP_003104526.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255925169|gb|ACU40680.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 286

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 6/179 (3%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             PL  ++T  +     L LI L Y + F  P L     +GG    P  +   IAL    
Sbjct: 111 WFPLRALATGYVDLFRGLPLIILLYLVGFGLPALR----LGGVPTDPVVLGG-IALVLTY 165

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A++AE+ R+G+ ++   Q+ AA +LGL HR+  RLV+LPQA+R + P L + ++ L K+
Sbjct: 166 SAYVAEVFRAGIESIHPSQIAAARSLGLDHRRTLRLVVLPQAVRRVTPALLNDFVALQKD 225

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             L   +G  D V     +  +T       ++   +++ L+I      + +  + A ++
Sbjct: 226 CGLISVLGAVDAVRAAQIVQAKTFN-FTPYVVAALLFVLLAIPSGRLADAVARRAAERQ 283


>gi|222102300|ref|YP_002546890.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84]
 gi|221728417|gb|ACM31426.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Agrobacterium radiobacter K84]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 18/229 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +      L     T+     +     VLG+++       +R    +  +   L ++
Sbjct: 1   MRDLLMWVPLLLDGLAQTLLLFLIVLALGSVLGLLVGF-----ARLARIRLVRYAALTFV 55

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F    L         + L+F  P L              + +  I  S   AA+ +E 
Sbjct: 56  EFFRGVSLYV-----TLFWLYFAAPFL--------GMQLSVWEAAVIGCSLTHAAYSSEY 102

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+ +++VP  Q EAA+AL ++  +  R V+LPQA+ +++P + ++++ LLK +S+   +
Sbjct: 103 VRAAVLSVPVSQTEAAVALSMSAFQRVRYVVLPQALVALLPLMGNEFVMLLKGTSIVSLI 162

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G A+L     +II  T Q + ++L  + IY  L+  +      +  +  
Sbjct: 163 GLAELTEQAHSIIVSTYQPVPVLLTVLGIYFILAQALIRLTQWMERRFG 211



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G   T  L    +   +++G LVG  RL+  +LV +    +VE FR +   V 
Sbjct: 7   WVPLLLDGLAQTLLLFLIVLALGSVLGLLVGFARLARIRLVRYAALTFVEFFRGVSLYVT 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +F+LY +   +            G  L +
Sbjct: 67  LFWLYFAAPFLGMQLSVWEAAVIGCSLTH 95


>gi|89214059|gb|ABD64371.1| amino acid ABC transporter permease protein 1 [Pseudomonas
           chlororaphis]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++     +LG+ L +     +     K      L  +   LI   P LV +   +    
Sbjct: 25  LELTAIGALLGVGLGIVG---AVVRAWKIQPFSALFGVYVELIRNTPFLVQLFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          E+ +  +A+     A+  EI+R+G+ A+PRGQ+EAA AL +T
Sbjct: 78  -------FGLPSLGLQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQLEAAAALAMT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+L  A+  + P L+SQ + ++  S++   +   +L      I ++  +A E 
Sbjct: 131 RLEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANFIQSRNFRAFET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   IYL ++++I   +N +  + 
Sbjct: 191 YALTTLIYLCMALLIRQLLNWVGRRY 216



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 3/147 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  L   G +    +G +    R    +  + +  VYVE+ RN P LV +FF+
Sbjct: 17  LLRGALFTLELTAIGALLGVGLGIVGAVVRAWKIQPFSALFGVYVELIRNTPFLVQLFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  + S+             M +N    S   +     A        L    +L  TRL 
Sbjct: 77  FFGLPSLGLQISEWQAAVLAMVINLGAYSTEIIRAGIQAIPR---GQLEAAAALAMTRLE 133

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTL 235
              H     AL  ++ +      +  L
Sbjct: 134 AFRHVVLLPALGKVWPALSSQIIIVML 160


>gi|327192285|gb|EGE59250.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 220

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +    +G+V++      SR        AL    +   +I  LP LVL+   +    
Sbjct: 29  VISILIGAAIGLVVAFALISRSRF-------ALVPARVYVTVIRNLPILVLVLFAF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          +  S  + LS Y+ A++AE+ R+GL+++PRG  EA +A+GLT
Sbjct: 78  -------FALPQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ P  +R+++P L+S  ++L K++SLA A+   +L      I  ++ + IE 
Sbjct: 131 GMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFRVIET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++   +Y++   +IA  M  +  ++AL  
Sbjct: 191 WMVTSALYVATCFLIAALMRLVERRLALPR 220


>gi|146342964|ref|YP_001208012.1| glutamate/aspartate ABC transporter permease [Bradyrhizobium sp.
           ORS278]
 gi|146195770|emb|CAL79797.1| glutamate/aspartate ABC transporter (permease protein)
           [Bradyrhizobium sp. ORS278]
          Length = 243

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 8/224 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +  L+   +T+ T+   ++ + + G ++ +      R    K    +  LY+  F   
Sbjct: 21  YFDMLLAGLKVTIVTSLSAWLIALIFGTIVGIL-----RSLPSKLAGWIGFLYVEFF--R 73

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P LV + L + +  +        ++     +P F +    +  + +A +A  + +G+ 
Sbjct: 74  NMPLLVQLFLWFFVLPELLPRAAGLWLKQMPNAPFFTAAV-GIGLFMSARVAVQLAAGIG 132

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++PRGQ  AA ALGLT  +  R VLLP A R I+PPLTS++LN +KNS++A+ +G  +L 
Sbjct: 133 SLPRGQKMAATALGLTTLQVYRYVLLPMAFRIILPPLTSEFLNTVKNSAVAITIGLIELT 192

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                +   + Q  E       +YL ++I++ + M  L   +A+
Sbjct: 193 GAARAMQEFSFQVFEAFSAATLMYLVINIIVVIGMRLLERAVAI 236



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/84 (34%), Positives = 41/84 (48%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           T   +Y   +L G   T   + S  + A I GT+VG  R   +KL  WI  +YVE FRN+
Sbjct: 16  TGAGTYFDMLLAGLKVTIVTSLSAWLIALIFGTIVGILRSLPSKLAGWIGFLYVEFFRNM 75

Query: 140 PPLVVIFFLYKSVLSVLPIPDHSI 163
           P LV +F  +  +  +LP      
Sbjct: 76  PLLVQLFLWFFVLPELLPRAAGLW 99


>gi|119960817|ref|YP_948500.1| glutamate permease [Arthrobacter aurescens TC1]
 gi|119947676|gb|ABM06587.1| Glutamate permease [Arthrobacter aurescens TC1]
          Length = 289

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 8/185 (4%)

Query: 214 KTGKALPLLYISTF-LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
             G AL LL IS    I     +VL  L+       PV+    F+     + +F ++ + 
Sbjct: 85  PLGIALCLLRISLIPWIRIPTQVVLEFLR-----GMPVVLMMLFVLLVFATGQFQAVVVG 139

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L  Y AA  AEI+R+G+ ++P+GQ EA +A+GL   ++   +  PQA+R ++P L +Q +
Sbjct: 140 LVLYNAAIFAEILRAGIQSLPKGQREAGLAIGLRSFQSRMSIEFPQAVRRMLPSLVAQLV 199

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            LLK++SL   VG+ +L+     + +  G         +   IY+ +++ ++     +  
Sbjct: 200 VLLKDTSLGYIVGYEELLRKIQIMADFLGPDFLFPAFFVGAAIYILINLTVSRIAIMIER 259

Query: 391 KIALK 395
           + + K
Sbjct: 260 RGSKK 264


>gi|296156266|ref|ZP_06839105.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893772|gb|EFG73551.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 247

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 13/204 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-----ISTFLIFGLPTLVLIALKYQLH 245
           +    L +VLS+ +  LS       G AL L       +   ++     + ++ L +   
Sbjct: 23  LGGAALTVVLSVVSALLSAAVGLAGGVALSLTRGGARLLLIGIVAFFRAIPVLMLIFWTF 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L   +        P   ++  ALS    A+++  V +G+ +V   Q +AA++LGL
Sbjct: 83  FLMPILLHIDV-------PGLAAVVCALSLIGGAYLSHAVHAGIASVGAAQQQAALSLGL 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +A R V+LPQA+R ++P   +Q+++L+K++SLA  VG  +   +   + ++      
Sbjct: 136 TRWQALRYVVLPQAVRIMMPSFVNQWVSLVKDTSLAYIVGVPEFTFLANQVNSRLMIYPA 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRL 388
           +I +    +YL L   +  F  R+
Sbjct: 196 QIFVFVGIVYLLLCSALQWFAYRV 219


>gi|209546901|ref|YP_002278819.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538145|gb|ACI58079.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               K+ V   VLG  L      L+R       +A+   YI  F   G P L+ +   + 
Sbjct: 21  WMTIKLTVICIVLGCSLGFLVG-LARASGNLALRAVSGAYIEFF--RGTPVLIQL---FW 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           + F  P++                S  IAL+ Y  A  +E  R+ L ++   Q++A +AL
Sbjct: 75  IFFCLPLILGVEL-------SNLASGVIALTLYMGAITSETFRASLKSIGLEQLDACVAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL        V+LPQA+   IP L S  ++L K S+L  AVG ADL+ VG  I N T + 
Sbjct: 128 GLPRSAQVINVVLPQAVLRAIPTLLSNCVSLFKESALVSAVGMADLMFVGQNISNNTARP 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +E++ +   IY +++  +   ++ +  +I  K
Sbjct: 188 VEVLTVVALIYFAIAFPLTRAVSLIEGRILKK 219



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 34/68 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L+G   T  L    ++    +G LVG  R S N  +  +   Y+E FR  P L+ +F+
Sbjct: 15  ALLLGLWMTIKLTVICIVLGCSLGFLVGLARASGNLALRAVSGAYIEFFRGTPVLIQLFW 74

Query: 148 LYKSVLSV 155
           ++  +  +
Sbjct: 75  IFFCLPLI 82


>gi|148985283|ref|ZP_01818506.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|149003316|ref|ZP_01828205.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|168486796|ref|ZP_02711304.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|237650053|ref|ZP_04524305.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CCRI 1974]
 gi|237822718|ref|ZP_04598563.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758499|gb|EDK65497.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147922481|gb|EDK73600.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|183570292|gb|EDT90820.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|301799734|emb|CBW32300.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae OXC141]
          Length = 225

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIEISILSVLLSMMFGTVMGIIM-----TSHSRIIRFLTRLYLDFTRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCYPISKLSTHLEKH 222



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + + GT++G    S ++++ ++ R+Y++  R +P LV++F +
Sbjct: 18  ILQGLGVTIEISILSVLLSMMFGTVMGIIMTSHSRIIRFLTRLYLDFTRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|254780172|ref|YP_003064585.1| general L-amino acid transport system permease protein [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254039849|gb|ACT56645.1| general L-amino acid transport system permease protein [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 386

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 116/267 (43%), Gaps = 18/267 (6%)

Query: 139 IPPLVVIF--FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
            P L+  F      S+L     P  S  + +G    +   +     +     I  F  ++
Sbjct: 131 TPMLIPSFPRKFLNSILLFGLFPIFSFFVLYGGLGLSIVETSLWGGLLVTLVISFFGIII 190

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            + L +    L R+ +    +   + +I  F    L T++ +A           +    F
Sbjct: 191 SMPLGILL-ALGRNSNIPVLRYACITFIELFRGVPLVTVLFMA----------SIMLPLF 239

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +  +    + +   + +S + +A+IAE++R GL ++ +GQ EAA +LGL++ +  RL+++
Sbjct: 240 LPDTWDVDKLLRALLGVSAFASAYIAEVLRGGLQSISKGQFEAANSLGLSYLQKMRLIIM 299

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWM 371
           PQ ++ +IP + + ++ L K+SSL   +   DL+ +     +++           ++   
Sbjct: 300 PQVIKRVIPGIVNTFIGLFKDSSLISIINMFDLLGIVRVNFSESTWISSVTPTTGLIFIG 359

Query: 372 FIYLSLSIMIALFMNRLNAKIALKEKK 398
           F++      I+L+   +   +    KK
Sbjct: 360 FVFWIFCFSISLYSVFIEKTLHKGSKK 386



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 40/79 (50%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           T++  G + T  ++F G+I +  +G L+  GR S   ++ + C  ++E+FR +P + V+F
Sbjct: 171 TSLWGGLLVTLVISFFGIIISMPLGILLALGRNSNIPVLRYACITFIELFRGVPLVTVLF 230

Query: 147 FLYKSVLSVLPIPDHSIVL 165
                +   LP       L
Sbjct: 231 MASIMLPLFLPDTWDVDKL 249


>gi|119946082|ref|YP_943762.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119864686|gb|ABM04163.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 14/228 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      +     L      + T  ++ V S VLG++L  +          +  KA  L 
Sbjct: 1   MSYNLDFYGLVPYLPQFVAGVGTTIQLTVISTVLGLILGTYCAA------GRISKARWLN 54

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I    I        I   + + F  P L              + +  IA+     A+ A
Sbjct: 55  WICAVYIEVTRNTPFIIQLFFIFFGLPAL--------GIKLSAWQAGMIAMVFNLGAYSA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A   GQ EAA  LGLTHR+    V+LP A + + P L SQ + ++  S++  
Sbjct: 107 EIIRAGIEATAIGQWEAAKTLGLTHRQIFMHVILPPAYQRVYPALVSQCIIVMLGSAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +   +L      + +++  + E  ++   IYL L+I++    + L  
Sbjct: 167 QISVEELTFAANFVQSRSFLSFESYMLTALIYLFLAILMRQLFSLLKK 214



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 43/107 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    + G   T  L     +   I+GT   AGR+S  + + WIC VY+EV RN P ++
Sbjct: 12  PYLPQFVAGVGTTIQLTVISTVLGLILGTYCAAGRISKARWLNWICAVYIEVTRNTPFII 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            +FF++  + ++             M  N    S   +     A   
Sbjct: 72  QLFFIFFGLPALGIKLSAWQAGMIAMVFNLGAYSAEIIRAGIEATAI 118


>gi|190894702|ref|YP_001984995.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700363|gb|ACE94445.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 220

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +    +G+V++      SR        AL    +   +I  LP LVL+   +    
Sbjct: 29  VISILIGAAIGLVVAFALISRSRF-------ALVPARVYVTVIRNLPILVLVLFAF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          +  S  + LS Y+ A++AE+ R+GL+++PRG  EA +A+GLT
Sbjct: 78  -------FALPQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ P  +R+++P L+S  ++L K++SLA A+   +L      I  ++ + IE 
Sbjct: 131 GMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFRVIET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++   +Y++   +IA  M  +  ++AL  
Sbjct: 191 WMVTSALYVATCFLIAALMRLVERRLALPR 220


>gi|330719151|ref|ZP_08313751.1| L-cystine permease [Leuconostoc fallax KCTC 3537]
          Length = 234

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 90/234 (38%), Gaps = 1/234 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +    + +S     +     +   S ++G  L L A  L R++       L    I
Sbjct: 1   MNFDIGFIFQVVSQIVRYVPVTIYMAFVSLIIGGALGL-AVALVRYYKVPILSQLFSTLI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +      L  + L+           +     +       P      I LS      ++E 
Sbjct: 60  TMLKGVPLILVFLVVFLIASQNFNHLAKAMGWQIRYGDLPMSALAIIGLSLMAMVGLSEA 119

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R    +V + Q +AA +LG+T  +  R VL+PQ +   +P + +  +NL+K +++A  V
Sbjct: 120 FRGAFESVKQVQFDAARSLGMTKMQTIRRVLIPQTLPVALPMIINMLINLIKGTAIASLV 179

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              ++ S      +   +  E  +    IY  ++I+I      L +++    ++
Sbjct: 180 SVVEIFSAATQAASSNYKYFEAYIAAAMIYWLMTIVIERGAVLLESRMDKSLRR 233


>gi|293393703|ref|ZP_06638012.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
 gi|291423825|gb|EFE97045.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Serratia odorifera DSM 4582]
          Length = 242

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 107/221 (48%), Gaps = 11/221 (4%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
           +P   +   A   V S + G+  +L  T L        G    LL         +P    
Sbjct: 18  WPDGPLGGAALTLVISLMAGVASALLGTVLGILLAMSRGALAALLAAVLGFFRAIPV--- 74

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           I L +  +F  P++            PE  ++  AL+   AA++A  V++G++A+  GQ 
Sbjct: 75  IMLIFWTYFLLPIVFGVEI-------PEITTVVCALALIAAAYLAHAVKAGIVAIGPGQW 127

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           +A ++LGLT  +   L++LPQA+R ++P   +Q+++L+K++SLA  VG  +L  +   + 
Sbjct: 128 QAGLSLGLTRWQTLALIVLPQALRMMVPSFINQWISLIKDTSLAYIVGVGELTFLATQVN 187

Query: 358 NQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           N++    +E+ L    +Y    + + L  + LN + + + K
Sbjct: 188 NRSMAYPMEVFLFVALVYFVFCLALDLLASGLNKRFSPQTK 228


>gi|218672025|ref|ZP_03521694.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli GR56]
          Length = 238

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +  +G VL       ++        AL  +Y + F       L++  + +  
Sbjct: 21  MTLAVTATALAIGAVLG-AIVAGAKLSGNPFFVALGNVYTTVFR-GVPELLIIYLIYFGG 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G+     G    P F +  +A+   + A+ AE+ R   +A+ +G++EAA A+G
Sbjct: 79  SSAVTSIGKAMGYEGFLGLPSFAAGALAVGIISGAYQAEVFRGAFLAISKGELEAASAIG 138

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +++PQ +R  IP L + +   LK+S+L    G A+L+         T Q  
Sbjct: 139 MHRGMRFRRIIIPQVLRFAIPGLGNVWQLSLKDSALISVTGLAELMRTSQVAAGSTRQYF 198

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +YL L+ +     N    +
Sbjct: 199 LFFIAGGCLYLILTSLSDRIFNGAERR 225



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 33/71 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   ++   + T  +  + +    ++G +V   +LS N     +  VY  VFR +P L++
Sbjct: 11  WGALLIFAALMTLAVTATALAIGAVLGAIVAGAKLSGNPFFVALGNVYTTVFRGVPELLI 70

Query: 145 IFFLYKSVLSV 155
           I+ +Y    S 
Sbjct: 71  IYLIYFGGSSA 81


>gi|119944194|ref|YP_941874.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119862798|gb|ABM02275.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 216

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 79/211 (37%), Gaps = 1/211 (0%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                + + G  +++  +  +       G    +       +      V + L     F 
Sbjct: 3   WSAWLTLIGGAGVTVSLSLAAILLSLPLGLLFGVFRWQKIAVLNGLLAVYVTLIRSTPFV 62

Query: 248 KPVLGQFNFIGGSTV-SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              L  F  +    +      +  + L+    AF +EI R+ L      Q+EAA A G++
Sbjct: 63  TLALFVFFGLPEIGIDMNPIPAAILVLTLNLTAFSSEIWRAALDNFSSEQLEAAEAYGMS 122

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K   L++ PQ  R+ + PLTS+   L+K +     +G  ++      I  QT   +  
Sbjct: 123 RIKTFWLIIFPQLWRANLGPLTSEITILIKGTPAVAVIGVVEITRAASRIGAQTYDPLPP 182

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L+ M +Y    ++I      L  K+  K K
Sbjct: 183 FLMAMILYTLFVVIIVKSQRLLEKKMTKKYK 213


>gi|331700615|ref|YP_004397574.1| polar amino acid ABC transporter inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
 gi|329127958|gb|AEB72511.1| polar amino acid ABC transporter, inner membrane subunit
           [Lactobacillus buchneri NRRL B-30929]
          Length = 229

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               KI   + ++G++L +    L R F  +  + +  LY+  F I     L+ +     
Sbjct: 23  WVTVKIAAVALIVGLILGIILGVL-RTFKNRPLRVVLRLYLEFFRIVPTVVLLFLF---- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            ++  P    FN  G            +  + + AA +++IVR  LI+VP+ Q E+  A+
Sbjct: 78  -YYILPRQLNFNLPGDQL-------ATLVFALWVAAEMSDIVRGALISVPQHQRESGKAI 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R VL+PQA+   IP   +    ++K +SL + +   D++++G  II      
Sbjct: 130 GLNRYQLYRYVLIPQAISLEIPATINLATRVIKTTSLLMLISVMDVINIGQQIIEANNHT 189

Query: 364 -----IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +    Y  +   ++ +  RL  K
Sbjct: 190 HPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKK 222



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 35/66 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   +I   I+G ++G  R   N+ +  + R+Y+E FR +P +V++F  
Sbjct: 18  LLGGLWVTVKIAAVALIVGLILGIILGVLRTFKNRPLRVVLRLYLEFFRIVPTVVLLFLF 77

Query: 149 YKSVLS 154
           Y  +  
Sbjct: 78  YYILPR 83


>gi|307255255|ref|ZP_07537070.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259690|ref|ZP_07541413.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861804|gb|EFM93783.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866230|gb|EFM98095.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 227

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 6/227 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L+     + T+  +   S ++  VL++  T L      K  K +   Y+  F   
Sbjct: 1   MFQDYLAVIAQGIPTSLSLTAVSLLIAFVLAVVFTFLL-SMENKLIKVMVNGYLMLFT-- 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y  H         +      +S  +    +AL+  +AA+  ++    + 
Sbjct: 58  GTPLLVQFFLIY--HGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+P+GQ E   ALGL+       +L+P A+R  +P  +++ + + K +SLA  +   D++
Sbjct: 116 AIPKGQWETCAALGLSRLDTL-KILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +      AI I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 175 GYARQLYGTEYDAITIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|229593271|ref|YP_002875390.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229365137|emb|CAY53375.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++     +LG+ L      + R +  +       +Y+   LI   P LV +   +    
Sbjct: 25  LELTAIGAILGVALGTVG-AVVRAWKIQPFAWCFGVYVE--LIRNTPFLVQLFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          E+ +  +A+     A+  EI+R+G+ A+PRGQ+EAA AL +T
Sbjct: 78  -------FGLPSLGLKITEWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQLEAAAALAMT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+L  A+  + P L+SQ + ++  S++   +   +L      I ++  +A E 
Sbjct: 131 RFEAFRHVVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANFIQSRNFRAFET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +   +YL +++MI   +N +  +  ++  +
Sbjct: 191 YALTTLVYLCMALMIRQLLNWIGRRFVMRNSR 222



 Score = 39.9 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 42/111 (37%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    +    +L G + T  L   G I    +GT+    R    +  AW   VYVE+ R
Sbjct: 6   DFVPVLANTDLLLRGALFTLELTAIGAILGVALGTVGAVVRAWKIQPFAWCFGVYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGLKITEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|323350547|ref|ZP_08086209.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|322123229|gb|EFX94914.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 230

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             ++   E++   L   YI  F++   P +VL+ L +   +  P   ++           
Sbjct: 42  AWAQISEEQSFAGLARGYI--FILRCTPPIVLLFLVF---YGIPEFLEWWLGLDINNWSR 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I +    AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P
Sbjct: 97  TVFVIITMILLFAAMIAEVFKAAYLAVPKGQTEAGLSIGLTPAQTFLRIVLPQAFRIALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            LT+  LNL+++++LA  +G  D++  G  +I++     ++E       IY  ++++++L
Sbjct: 157 NLTTALLNLMRDAALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSL 216

Query: 384 FMNRLNAKIALKEK 397
               L   + +KE+
Sbjct: 217 ASQLLEKSLTVKER 230


>gi|257790889|ref|YP_003181495.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|317488400|ref|ZP_07946954.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
 gi|325830513|ref|ZP_08163966.1| putative glutamate/glutamine/aspartate/asparagine transport system
           permease protein BztB [Eggerthella sp. HGA1]
 gi|257474786|gb|ACV55106.1| polar amino acid ABC transporter, inner membrane subunit
           [Eggerthella lenta DSM 2243]
 gi|316912504|gb|EFV34059.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Eggerthella sp.
           1_3_56FAA]
 gi|325487422|gb|EGC89863.1| putative glutamate/glutamine/aspartate/asparagine transport system
           permease protein BztB [Eggerthella sp. HGA1]
          Length = 220

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 27/231 (11%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T+  +A   + S VLG V+S+      R  + +  + +  +YI  
Sbjct: 8   FTWVNMRFLLQGLGMTLLISALAILCSVVLGTVISVM-----RTSNARVLRGIATVYIEI 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F                   + P+L    F       P   +  +A + +T+A +AEIVR
Sbjct: 63  FK------------------NTPLLLWIMFTFFVAQLPPIGAAVLAFTLFTSASVAEIVR 104

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVG 345
            GL +VP GQ EAA + G +  +   L++LPQA+R+++P L SQ++  +K++S L  A+ 
Sbjct: 105 GGLASVPHGQYEAARSQGFSTVQTYVLIILPQALRNMVPALLSQFVTTIKDTSYLWGAMA 164

Query: 346 FADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L+  G  +    N T Q   I  I   IY  +   ++  +     ++ 
Sbjct: 165 LQELMGRGMILMNSYNSTAQIFAIFGIMALIYFIVCFTLSQIVRAYQRRLK 215



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 66/195 (33%), Gaps = 4/195 (2%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +           +L G   T  ++   ++ + ++GT++   R S  +++  I  VY+E+F
Sbjct: 4   IAALFTWVNMRFLLQGLGMTLLISALAILCSVVLGTVISVMRTSNARVLRGIATVYIEIF 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF----LNNRGLSFPTLTMDTNAKIFVF 192
           +N P L+ I F +                 F       +   GL+         A+   F
Sbjct: 64  KNTPLLLWIMFTFFVAQLPPIGAAVLAFTLFTSASVAEIVRGGLASVPHGQYEAARSQGF 123

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S V   VL +    L         + +  +  +++L   +    L+     L        
Sbjct: 124 STVQTYVLIILPQALRNMVPALLSQFVTTIKDTSYLWGAMALQELMGRGMILMNSYNSTA 183

Query: 253 QFNFIGGSTVSPEFM 267
           Q   I G      F+
Sbjct: 184 QIFAIFGIMALIYFI 198


>gi|118586385|ref|ZP_01543834.1| glutamine ABC transporter, integral membrane protein [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433172|gb|EAV39889.1| glutamine ABC transporter, integral membrane protein [Oenococcus
           oeni ATCC BAA-1163]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/160 (30%), Positives = 94/160 (58%), Gaps = 9/160 (5%)

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+ + + ++F  PV+G +         P F +  IA++ + +  +AEI+R GL+A+P 
Sbjct: 70  LPLLLIIFFVYFALPVIGIY--------LPVFWATVIAMTVFESTMLAEIIRGGLLAIPI 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E A ++G+T+++A   ++LPQA++ +IPP+ SQ ++L+K++SLAV +  A++   G 
Sbjct: 122 GQTEGARSVGMTNQQALLNIILPQAIKKMIPPIISQLISLVKDTSLAVGIVLAEMTFRGQ 181

Query: 355 TIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I  Q     I + +    +Y  L+  ++L     + ++A
Sbjct: 182 IIYAQNSNYTIPVFIALAIMYFILNYGLSLIARWFDHRMA 221


>gi|154248468|ref|YP_001419426.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154162553|gb|ABS69769.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 473

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 18/231 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           L      +     + +   V GI +SL       L R       KAL +++I  +    L
Sbjct: 253 LPQVETRLWGGLLVTLVIAVTGITVSLPFGILLALGRRSKLPLVKALSIIFIEFWRGVPL 312

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            T VL    Y L           F+ G       +   + ++ + +A++AE+VR GL A+
Sbjct: 313 IT-VLFFATYMLPL---------FLPGRLTIDGLLRALVGVALFASAYMAEVVRGGLQAI 362

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ E A+A+GL      RLV+LPQA++ +IP + + ++ L K+++L + V   DL+  
Sbjct: 363 PKGQYEGAMAVGLPSSLMLRLVVLPQALKLVIPGIVNNFIGLFKDTTLVLIVSIFDLLGS 422

Query: 353 GGTIINQTGQA-----IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                     A              IY      ++ +   L  ++   ++ 
Sbjct: 423 MRAAFTDPNWASPTTLFTGFGFAGIIYFVFCFGMSRYSMALEKRLDRAQRH 473


>gi|302186712|ref|ZP_07263385.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae 642]
          Length = 225

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 41  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 88  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPF 147

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 148 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 207

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 208 WLVRRYEQH 216



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  +     +   ++  ++   RLS  + + W   VYVEV R I  LV+
Sbjct: 14  IARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|26991430|ref|NP_746855.1| amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|24986503|gb|AAN70319.1|AE016673_4 amino acid ABC transporter, permease protein [Pseudomonas putida
           KT2440]
 gi|313500660|gb|ADR62026.1| Amino acid ABC transporter, permease protein [Pseudomonas putida
           BIRD-1]
          Length = 219

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 1/198 (0%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-FDKPVLGQFN 255
           G VLS+  T +S       G  L L   S       P+LV++ L              F 
Sbjct: 18  GFVLSMQVTAVSLGLGVVLGLLLALGVSSPSRWLRYPSLVVVELGRGAPALILLQYFYFG 77

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               +     F +  +A++  TAA+ +EI+R G+ +V  GQ EAA  +GL    A R V+
Sbjct: 78  LPSVNLTLTSFWAAALAMAYCTAAYTSEIIRGGIESVAAGQTEAAEVIGLNRFDALRFVI 137

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQA+R  +P L    + + + SSL   +   ++VS   +I + T + + ++++   +Y 
Sbjct: 138 LPQALRVALPSLLGFSIMMFQASSLCFTIALPEIVSRASSIGSSTFEYMPVLILAGLMYA 197

Query: 376 SLSIMIALFMNRLNAKIA 393
           ++     L +  L  ++A
Sbjct: 198 AVCAPATLGVAALEKRLA 215


>gi|221197499|ref|ZP_03570546.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221204172|ref|ZP_03577190.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221176338|gb|EEE08767.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221184053|gb|EEE16453.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 221

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 17/209 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   +   +LG VLSL     SR       +     Y+  F   G P L+ +   + + F
Sbjct: 27  ATCAIVGSLLGFVLSLLRMSPSR-----WLRGPVAAYVEFF--RGTPLLIQL---FWVFF 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV+ +          P ++S+ I+L+ Y AA  +E  R  L ++   Q +A IAL L+
Sbjct: 77  CFPVVLRLPI-------PPYLSVLISLTLYMAAITSETFRGSLKSIAGEQHDACIALSLS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                  V+ PQA+   IPPL S  ++L K S+L  +VG ADL+ VG  + N T + +E 
Sbjct: 130 PHVKIVYVIFPQALLRAIPPLLSNVVSLFKESALISSVGIADLMFVGQNVSNSTARPVEF 189

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +     IY  ++  +   +  + +++  +
Sbjct: 190 LTTVAVIYFLVAFPLTRLVGVVESRMLRR 218



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 39/87 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   ++ G   T     +  I  +++G ++   R+S ++ +      YVE F
Sbjct: 3   LDFSVVWPYWFVLVKGLALTLAYTATCAIVGSLLGFVLSLLRMSPSRWLRGPVAAYVEFF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           R  P L+ +F+++     VL +P    
Sbjct: 63  RGTPLLIQLFWVFFCFPVVLRLPIPPY 89


>gi|186471955|ref|YP_001863273.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184198264|gb|ACC76227.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 246

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 13/204 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST-----FLIFGLPTLVLIALKYQLH 245
           +    L +++S+ +  LS       G AL +   +T      ++     + ++ L +   
Sbjct: 23  LGGAALTLIMSVMSALLSAVTGLTAGIALSMTRGATHLALVTIVGFFRAIPVLMLIFWTF 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L   +        P   ++  AL+    A+++  V++G+ AV  GQ +AA +LGL
Sbjct: 83  FLMPMLLHVDV-------PGLAAVVCALALVGGAYLSHSVQAGIAAVGAGQRQAAASLGL 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +  R VLLPQA+R + P   +Q+++L K++SLA  VG  +   +   + N+     +
Sbjct: 136 TCWQTLRYVLLPQAVRIMTPSFVNQWVSLTKDTSLAYIVGVPEFTFLANQVNNRLMVYPV 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRL 388
           +I L    +YL L   +     RL
Sbjct: 196 QIFLFVGLVYLLLCSALQFVATRL 219


>gi|116491603|ref|YP_811147.1| ABC-type amino acid transport system, permease component
           [Oenococcus oeni PSU-1]
 gi|290891210|ref|ZP_06554272.1| hypothetical protein AWRIB429_1662 [Oenococcus oeni AWRIB429]
 gi|116092328|gb|ABJ57482.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Oenococcus oeni PSU-1]
 gi|290479174|gb|EFD87836.1| hypothetical protein AWRIB429_1662 [Oenococcus oeni AWRIB429]
          Length = 222

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/160 (30%), Positives = 94/160 (58%), Gaps = 9/160 (5%)

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+ + + ++F  PV+G +         P F +  IA++ + +  +AEI+R GL+A+P 
Sbjct: 70  LPLLLIIFFVYFVLPVIGIY--------LPVFWATVIAMTVFESTMLAEIIRGGLLAIPI 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ E A ++G+T+++A   ++LPQA++ +IPP+ SQ ++L+K++SLAV +  A++   G 
Sbjct: 122 GQTEGARSVGMTNQQALLNIILPQAIKKMIPPIISQLISLVKDTSLAVGIVLAEMTFRGQ 181

Query: 355 TIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I  Q     I + +    +Y  L+  ++L     + ++A
Sbjct: 182 IIYAQNSNYTIPVFIALAIMYFILNYGLSLIARWFDHRMA 221


>gi|330448490|ref|ZP_08312138.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492681|dbj|GAA06635.1| amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 310

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 5/249 (2%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           + +     ++  P  +  LP+  F         +L     A +F     LG   SL   R
Sbjct: 57  WQWHKAFDLVFTPGRNGELPY-FFQGVISTIRLSLWGMVFAAVFGLLLALGRRSSLIFFR 115

Query: 207 LSRHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVLG---QFNFIGGSTV 262
           +  + + +  + +P L+++  F  F    LV +     L  +        Q+   G + +
Sbjct: 116 VPANAYIQLVRNIPPLVFVFIFYFFISSQLVPLLGLDDLFRNYHGHENRLQYFLFGDAQL 175

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                S  + +    AA+IAE++RSG+ A+ +GQ EAA +LGL+     R V+ PQA+  
Sbjct: 176 WENLFSGILCIGLIAAAYIAEVIRSGIDAIAKGQWEAADSLGLSKWDRFRYVIFPQAIAG 235

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I+P L  Q+++++K+SS+   +   ++  VG  I N +G   EI L+   +YL L + ++
Sbjct: 236 IVPALAGQFISIVKDSSIISLISIQEMTFVGSEIANSSGLIFEIWLLVGAVYLVLCLSLS 295

Query: 383 LFMNRLNAK 391
           L  ++L  +
Sbjct: 296 LLFSKLEKR 304



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 9/166 (5%)

Query: 62  GFLSERAGFEIDQGI---VPYTSDSSYAT-----AILVGFVNTFWLAFSGMIPATIIGTL 113
           G+L  R+   I+        +    +            G ++T  L+  GM+ A + G L
Sbjct: 43  GWLYYRSSIGINYHWQWHKAFDLVFTPGRNGELPYFFQGVISTIRLSLWGMVFAAVFGLL 102

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPL-VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +  GR S+          Y+++ RNIPPL  V  F +     ++P+     +        
Sbjct: 103 LALGRRSSLIFFRVPANAYIQLVRNIPPLVFVFIFYFFISSQLVPLLGLDDLFRNYHGHE 162

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           NR   F          +F     +G++ + +   + R   +   K 
Sbjct: 163 NRLQYFLFGDAQLWENLFSGILCIGLIAAAYIAEVIRSGIDAIAKG 208


>gi|170694836|ref|ZP_02885986.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140196|gb|EDT08374.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 265

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 18/209 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LGIV    A  L    H +       +++  F       ++L+        
Sbjct: 30  LILSVISTALGIVAG-MALALCAVSHTRWLTWPVRVFVDVFRGLPAALVILV-------- 80

Query: 247 DKPVLGQFNFIGGSTVSP-EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              V      +G S   P  +    +AL+  ++A+IAEI RSG+ +V R QM A  ALG+
Sbjct: 81  ---VGQGLAPVGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRRQMSACQALGM 137

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA----DLVSVGGTIINQTG 361
           T+    R V++PQ +R I+P L +Q+++++K+SSL   +G      DL ++G      T 
Sbjct: 138 TYWSGMRHVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIGQNAAVNTA 197

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +  ++    +YL +++ +   +N L+ 
Sbjct: 198 N-LSPLVAAGAVYLLITVPLTHAINHLDR 225



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 4/188 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK- 150
           G VNT  L+        + G  +    +S  + + W  RV+V+VFR +P  +VI  + + 
Sbjct: 25  GLVNTLILSVISTALGIVAGMALALCAVSHTRWLTWPVRVFVDVFRGLPAALVILVVGQG 84

Query: 151 ---SVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
                LS+     + + +     +++  ++    +   +      S    + ++ ++   
Sbjct: 85  LAPVGLSLFGPNPYPLAIVALALVSSAYIAEIFRSGIQSVGRRQMSACQALGMTYWSGMR 144

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                +   + LP L      I    +LV          D   +GQ   +  + +SP   
Sbjct: 145 HVIVPQGVRRILPALANQFISIVKDSSLVYFLGLLTSQRDLFTIGQNAAVNTANLSPLVA 204

Query: 268 SLYIALSC 275
           +  + L  
Sbjct: 205 AGAVYLLI 212


>gi|126463864|ref|YP_001044977.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126105675|gb|ABN78205.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 221

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 15/235 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               I L F + +  + L      +    K+      LG+V  LF   L    H +  + 
Sbjct: 1   MQDFIRLFFNLEVMTQTLPLLMQGLWMTVKLCAAVIALGLVGGLFL-ALGALSHRRWLRW 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            P   +  FL    P ++LI +   L F    +              F ++ +A     +
Sbjct: 60  -PAFAVIDFLRALPPLVLLIFIYSGLPFAGLAI------------SPFAAVAVAFFLNNS 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R+G+ +VP GQ EAA A GLT  +    V+LPQA+R+++P L S  + ++K +
Sbjct: 107 AYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHVVLPQAVRNVLPDLLSNTVEVVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           SLA  V  A+L+       + T  A  ++L  +   L L   +   ++R   ++A
Sbjct: 167 SLASVVSLAELLYSANMARSLTYNASPLVLAALVY-LVLLWPLVRLVSRYQRRLA 220



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L  + +    + G  +  G LS  + + W     ++  R +PPLV++ F+
Sbjct: 21  LMQGLWMTVKLCAAVIALGLVGGLFLALGALSHRRWLRWPAFAVIDFLRALPPLVLLIFI 80

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +            +    FLNN             +
Sbjct: 81  YSGLPFAGLAISPFAAVAVAFFLNNSAYYAEIYRAGIQS 119


>gi|107022691|ref|YP_621018.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116689640|ref|YP_835263.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105892880|gb|ABF76045.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116647729|gb|ABK08370.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 240

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 8/208 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH------FHEKTGKALPLLYISTF 227
                  LT+   A   V + V G++L++      +        +    +  PLL    F
Sbjct: 11  WLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKTPRAAAAAYVVAFRNTPLLVQLLF 70

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG+ +L+       L+    V      +   +   EF++ ++ LS YTAAF+AE   +
Sbjct: 71  WYFGVASLLPETWIAWLNARHAVSVGPFTLAWPSF--EFVAGWVGLSAYTAAFVAEECEA 128

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  QY+NL+KNSSLA+A+G A
Sbjct: 129 GLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFGQYMNLVKNSSLAMAIGVA 188

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +L      +  +T Q      +   +Y+
Sbjct: 189 ELSYASRQVETETFQTFAAFGVATLLYI 216



 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 2/158 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  LA +  + AT+ G L+   R +  K        YV  FRN P LV 
Sbjct: 8   YLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKTPRAAAAAYVVAFRNTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL--SL 202
           + F Y  V S+LP    + +                        + + ++    V     
Sbjct: 68  LLFWYFGVASLLPETWIAWLNARHAVSVGPFTLAWPSFEFVAGWVGLSAYTAAFVAEECE 127

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              R  R        AL L  + +     LP  V IAL
Sbjct: 128 AGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165


>gi|313500661|gb|ADR62027.1| Amino acid ABC transporter, permease protein [Pseudomonas putida
           BIRD-1]
          Length = 213

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 14/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + V +F +G+VL      L R    K    L  + + T         
Sbjct: 5   LMMLLNGIPWTIAVTVLAFCVGVVLGFPICAL-RMSRFKVLSILAAMLVLTLRSIPPIVW 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +                     GG      F +  + L   TAA ++E+ R    A+P G
Sbjct: 64  LFFIFF-------------GIGGGYISLSPFTAAVVGLGLITAAHMSEVYRGAFAAIPAG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L+  +    V+LPQ +R  IP   +  + LLK+S++A  +G  ++      
Sbjct: 111 QFEAAYVLNLSAPQRFFDVVLPQLVRIAIPTSATYAIGLLKDSAVASTIGVGEISFQAYQ 170

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  QT Q + +      +YL LS+ +ALF   L+A +  +  +
Sbjct: 171 VSQQTFQGLSVYSAAAVVYLVLSVPVALFSRWLSATLKQRIAR 213



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
               +L G   T  +         ++G  + A R+S  K+++ +  + V   R+IPP+V 
Sbjct: 4   ILMMLLNGIPWTIAVTVLAFCVGVVLGFPICALRMSRFKVLSILAAMLVLTLRSIPPIVW 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +FF++  +               G+
Sbjct: 64  LFFIFFGIGGGYISLSPFTAAVVGL 88


>gi|289674516|ref|ZP_06495406.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
 gi|302186817|ref|ZP_07263490.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
 gi|330900039|gb|EGH31458.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330938795|gb|EGH42320.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 221

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++     +LG+ L +    + R +  +    +  +Y+   LI   P LV +   +    
Sbjct: 25  LELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE--LIRNTPFLVQLFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          E+ +  +A+     A+  EIVR+G+ A+P+GQ+EA+ AL ++
Sbjct: 78  -------FGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAIPKGQLEASAALAMS 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+L  A+  + P L+SQ + ++  SS+   +   +L      I ++  ++ E 
Sbjct: 131 RYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATEELSFYANFIQSRNFRSFET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++   IYL+++++I   +  +  +   + +
Sbjct: 191 YIVTTLIYLAMALLIRQLLAWIGRRYISRNR 221



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQSIDLLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAI 116


>gi|224371698|ref|YP_002605862.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
 gi|223694415|gb|ACN17698.1| ABC-type branched-chain amino acid transport-system, permease
           component [Desulfobacterium autotrophicum HRM2]
          Length = 384

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 113/273 (41%), Gaps = 18/273 (6%)

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTL 181
             ++A++    V     +  L V   +   +   LP+            ++        L
Sbjct: 124 RPVMAFVIFAAVCAVTALRLLGVRMIMGMWLFLPLPLYFLINGGMGLTVVDQSLWGGLML 183

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
           +    A   + S  LGI+L+L      R       ++L +  I +     L T++ +A  
Sbjct: 184 STGLAAIGIIMSIPLGILLAL-----GRRSEWVVIRSLSIGMIESIRGVPLITILFMA-- 236

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
                    +    F+         + + I +  ++AA+IAE+VR GL A+P+GQ+EAA 
Sbjct: 237 --------SVMLPIFLPREMNINNLLRVQIGIILFSAAYIAEVVRGGLQAIPQGQIEAAT 288

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT- 360
           +LGL     T  V+LPQA+R ++P L  + + L K++SL + VG  D + +         
Sbjct: 289 SLGLPGWVVTAFVVLPQALRHVVPSLIGRCVALFKDTSLVIIVGLLDFLGMIKASAQDPD 348

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G   E  +    +Y  +   ++ +   +  +
Sbjct: 349 WLGYDAEAYVFCALVYWIICFSMSRYGRSIEHR 381



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 15/148 (10%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            ++  G + +  LA  G+I +  +G L+  GR S   ++  +    +E  R +P + ++F
Sbjct: 175 QSLWGGLMLSTGLAAIGIIMSIPLGILLALGRRSEWVVIRSLSIGMIESIRGVPLITILF 234

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
                             +   +FL         L +     +F  +++  +V       
Sbjct: 235 MA---------------SVMLPIFLPREMNINNLLRVQIGIILFSAAYIAEVVRGGLQAI 279

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   T   LP   ++ F++     
Sbjct: 280 PQGQIEAATSLGLPGWVVTAFVVLPQAL 307


>gi|254453112|ref|ZP_05066549.1| ABC transporter, membrane spanning protein [Octadecabacter
           antarcticus 238]
 gi|198267518|gb|EDY91788.1| ABC transporter, membrane spanning protein [Octadecabacter
           antarcticus 238]
          Length = 215

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 14/222 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L F    +     + + SF+ G V+ L A  L+R    +        YI+ F   G P
Sbjct: 7   PELFFLLQGLKWTLLLTLISFIGGGVIGL-AIALARVSSLRILNWSAAAYIAVF--QGTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ + + +        L +FN          ++++  A + + +AF+ +I R  + ++P
Sbjct: 64  LLMQLFVIFY----GLALMEFNV-------DAWVAVSFAFTAHASAFLGDIWRGTIQSLP 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EA+ ALG+ +    R ++LPQA++  +P      + L K +SLA  VGF +L   G
Sbjct: 113 RGQTEASNALGIGYISRMRDIILPQAIKISLPATIGFAVQLTKGTSLAAIVGFVELARAG 172

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             + N   Q + +  I   IY  +   ++++ + +  K++L 
Sbjct: 173 QIVSNLIFQPLLVYGIVGVIYFFVCWPMSIWGSAMERKLSLG 214



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 38/100 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  L     I   +IG  +   R+S+ +++ W    Y+ VF+  P L+ +F +
Sbjct: 12  LLQGLKWTLLLTLISFIGGGVIGLAIALARVSSLRILNWSAAAYIAVFQGTPLLMQLFVI 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  +  +    D  + + F    +              + 
Sbjct: 72  FYGLALMEFNVDAWVAVSFAFTAHASAFLGDIWRGTIQSL 111


>gi|332179315|gb|AEE15004.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermodesulfobium narugense DSM 14796]
          Length = 225

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 13/181 (7%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              ++ K +  +Y+    I   P ++ +   Y      P L          V P F    
Sbjct: 53  SQFRSAKIINRIYVEF--IQNTPLVIQVFFLYN---GLPHLD--------IVLPVFAVGV 99

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I +  Y  A+IAE+VR+G+ A+ RGQ+EAA + G T  +A R ++LPQA   I PPLT+Q
Sbjct: 100 IGVGVYHGAYIAEVVRAGIQAIHRGQLEAAYSQGFTFWQAMRYIILPQAKIIIFPPLTNQ 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            ++L+KN+S+   V   DL+    +  +         ++   +YLSL + +A F + L  
Sbjct: 160 AVSLIKNTSVMAMVAGGDLMYHADSWSSNNLYYGPAYIVVGLLYLSLCLPLARFADYLER 219

Query: 391 K 391
           K
Sbjct: 220 K 220



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 GFV T  ++F G++ A ++G + G    S  +    I R+YVE  +N P ++ +
Sbjct: 19  WRIFAEGFVTTISVSFLGLLLALVLGLIFGVLATSQFRSAKIINRIYVEFIQNTPLVIQV 78

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           FFLY  +  +  +     V   G+ + +       +     A 
Sbjct: 79  FFLYNGLPHLDIVLPVFAVGVIGVGVYHGAYIAEVVRAGIQAI 121


>gi|253990335|ref|YP_003041691.1| arginine permease ArtM [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781785|emb|CAQ84948.1| arginine transport system permease protein artm [Photorhabdus
           asymbiotica]
          Length = 222

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 91/224 (40%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +      +  +  + + +  +   LSL  T +      K      L+     L  G P 
Sbjct: 4   YIQQILPGLQISLSLTIAALFVAFTLSLLFTII---LTMKLPVLTQLVKTYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV   L Y      P + ++         P F    + L+  +AA+  ++    + A+P 
Sbjct: 61  LVQFFLVYYGPGQFPSIKEYPLFWQLLSEPWF-CAMVTLALNSAAYSTQLFYGAVKAIPA 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ  +  ALG++  ++   +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWHSCQALGMSKAQSM-RILLPYAFKRALSSYSNEVVLIFKSTSLASTITLLEVMGYSR 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +   A+   +    IYL ++ ++ L M  +  +    E +
Sbjct: 179 ILFGRNYDAM-AFVAAGVIYLCVNGILTLLMRMIERRALAFEHR 221



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 35/117 (29%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   +  L  + +  A  +  L          ++  + + Y+ +F   P LV 
Sbjct: 4   YIQQILPGLQISLSLTIAALFVAFTLSLLFTIILTMKLPVLTQLVKTYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            F +Y        I ++ +            +    L     +    +  V  I   
Sbjct: 64  FFLVYYGPGQFPSIKEYPLFWQLLSEPWFCAMVTLALNSAAYSTQLFYGAVKAIPAG 120


>gi|119383896|ref|YP_914952.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373663|gb|ABL69256.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 219

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +               TN  I + +  L ++     T L        G     + +
Sbjct: 1   MDFDLAAFGDAFPRLLPAALTNLTIALVAMTLALIGGTVLTVLRTTG---IGLLTGAIGV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I G P LV I L Y   +  P L                +  +A++  ++ FI EI
Sbjct: 58  LISFIRGTPILVQIFLFY---YGLPAL--------GLDLTPIQAGVLAIALNSSIFITEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL  +  G +EAAIALG+  R     V+LPQ    I+PPL ++   ++K ++L   +
Sbjct: 107 MRGGLSGMDPGPVEAAIALGVRARTIWTRVILPQLYIRILPPLVNELTTIVKGTALLSVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +++     I N T + +E +L    +  +L++ I+    R+  + A + 
Sbjct: 167 TVVEVLRTAQQIANTTFRPLEALLAAAIVLFALNLAISQLGRRIETRFAARR 218


>gi|303250563|ref|ZP_07336760.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307252992|ref|ZP_07534879.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650551|gb|EFL80710.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859521|gb|EFM91547.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 227

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 10/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + +FVL ++L+   +  S+           ++     L  G P LV   L Y  
Sbjct: 19  LTAVSLLIAFVLAVILTFLLSMESKLIK-------AIVNGYLMLFTGTPLLVQFFLIY-- 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H         +      +S  +    +AL+  +AA+  ++    + A+P+GQ E   ALG
Sbjct: 70  HGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCAALG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       +L+P A+R  +P  +++ + + K +SLA  +   D++     +      AI
Sbjct: 130 LSRLDTL-KILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEYDAI 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 189 TIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|184155294|ref|YP_001843634.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
 gi|183226638|dbj|BAG27154.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
          Length = 234

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 98/214 (45%), Gaps = 2/214 (0%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQ-L 244
           A + +   ++  V+ L    L     E+  K L P++ +    + G P +V + + Y  L
Sbjct: 18  APVTLLIAIVAAVVGLLLAILVAVVRERQVKGLAPIVAVIVSFVRGTPIIVQLYVVYYGL 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                V+  + +       P  +  + A S    A ++E +RS   AV  GQ EAA+A+G
Sbjct: 78  PQLLVVMKGWGWNTNPNGLPALVITFTAFSLNAMANLSESIRSAYHAVDYGQYEAAVAVG 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +A   +++PQ + ++IP  T+ +L+L+K+++L   +G  +++     I     + +
Sbjct: 138 MTPLRAIIQIVVPQLIANLIPNFTNIFLDLIKDTALVYNIGIVEIMGEANIISAIGFKYL 197

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E  +  + IY+ +    A     +   I     +
Sbjct: 198 ETYVDALIIYIIICWFFAKLFQVIELIIRRSSSR 231


>gi|170696122|ref|ZP_02887257.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170138937|gb|EDT07130.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 246

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 4/232 (1%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS--RHFHE 213
           + + +  +   +  +L +  L    L+   +    +  F L +        ++     + 
Sbjct: 1   MHLMNFWLDPRYLGWLAHGFLITLILSACVSVCATLLGFGLAMARIAQHRAVATAAKLYV 60

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              +  PLL    F  FG  TL+  A    L  + P +           S E  + ++ L
Sbjct: 61  LVFRNSPLLVQLLFWYFGAATLLPSAWMTWL--NTPHVLSAGPFALHWPSFELFAGWLGL 118

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +CY+ AFIAE  R+G+  V   Q +A+ ALG+T     R V+LPQA+R   PPL  QY+N
Sbjct: 119 TCYSTAFIAEEFRAGIRGVGIAQYQASAALGMTRYATLRHVVLPQAVRIATPPLAGQYMN 178

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           ++KNSSL +A+G A+L      +  ++ +  +       +Y+    +I + +
Sbjct: 179 IVKNSSLTMAIGVAELSYASRQVDTESFRTFQAFGTATVLYVGTIALIEMAL 230



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++ +  D  Y   +  GF+ T  L+    + AT++G  +   R++ ++ VA   ++YV 
Sbjct: 2   HLMNFWLDPRYLGWLAHGFLITLILSACVSVCATLLGFGLAMARIAQHRAVATAAKLYVL 61

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           VFRN P LV + F Y    ++LP    +       +LN   +              +F+ 
Sbjct: 62  VFRNSPLLVQLLFWYFGAATLLPSAWMT-------WLNTPHVLSAGPFALHWPSFELFAG 114

Query: 195 VLGI 198
            LG+
Sbjct: 115 WLGL 118


>gi|126740302|ref|ZP_01755991.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126718757|gb|EBA15470.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 258

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 13/221 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A      F+L I L L    +   +     +          +I G P L
Sbjct: 43  LEGLWTTIWILAVSTFLGFLLAIPLGL-TQAIGPWYLSVPARTFCT------IIRGTPLL 95

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + I L Y       +  QF +I  S + P     +     AL+   A +  E++R    +
Sbjct: 96  LQIWLLYYG--LGSLFPQFPWIRSSELWPYLRQAWPYAVTALTLSYAGYEGEVMRGAFSS 153

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ+EAA + G+      R + LPQA+ +++P L  + +  LK + L   +   ++ S
Sbjct: 154 VAKGQLEAAKSFGMPRFTMFRRIWLPQAIGNVLPTLGGETILQLKATPLVATITVVEIYS 213

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V   + + T    E +L+   +Y+ ++ +I L   R   ++
Sbjct: 214 VSSRVRSDTFIVYEPLLLLALVYMVIAGLIGLAFKRFENRL 254



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 34/104 (32%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   L G   T W+         ++   +G  +      ++   R +  + R  P L+ 
Sbjct: 38  YAPLALEGLWTTIWILAVSTFLGFLLAIPLGLTQAIGPWYLSVPARTFCTIIRGTPLLLQ 97

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           I+ LY  + S+ P            +L        T    + A 
Sbjct: 98  IWLLYYGLGSLFPQFPWIRSSELWPYLRQAWPYAVTALTLSYAG 141


>gi|330807873|ref|YP_004352335.1| histidine ABC transporter, permease protein component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375981|gb|AEA67331.1| histidine ABC transporter, permease protein component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 236

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 94/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +T+   +   +  F++ I LS+   R+S  F+ +       
Sbjct: 6   QEYWRPFLYSDGVNVTGLAMTLWLLSASLLIGFLVSIPLSIA--RVSPKFYVRWPVQF-- 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    +     +  S          +A +  T A+ 
Sbjct: 62  ---YTYLFRGTPLYIQLLICYTGIYSIAAVRAQPML-DSFFRDAMNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P A+R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMNHGEVEAAKAYGLTGWKLYTYVIMPSALRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   IYL+++  +         +
Sbjct: 178 FTATVPDVLKVARDANSATFLTFQSFGIAALIYLTVTFALVGLFRLAERR 227



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + ++   ++   +   R+S    V W  + Y  +FR  P  + +   Y
Sbjct: 20  VTGLAMTLWLLSASLLIGFLVSIPLSIARVSPKFYVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  +    ++  F     N  +    L             +
Sbjct: 80  TGIYSIAAVRAQPMLDSFFRDAMNCTILAFALNTCAYTTEIFAGAI 125


>gi|306831519|ref|ZP_07464677.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304426304|gb|EFM29418.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 227

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 94/228 (41%), Gaps = 14/228 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        +      +    ++  F  +   VL L    L +++       +  +YI 
Sbjct: 1   MFNWEFIRANIPLYQEALVLTIRLAFFGILGAFVLGLLI-SLIKYYKIPVLSQICQVYIE 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             L    P L+ +   Y L+F  P +          V    M   + L     +++AE  
Sbjct: 60  --LSRNTPLLIQL---YFLYFGLPKI--------GIVLSSEMCAVVGLIFLGGSYMAESF 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSGL A+ + Q E  +++GL   +    V+ PQA+   +P L +  + L+K +S+   V 
Sbjct: 107 RSGLEAISKTQYEVGLSIGLKPVQNFFYVIFPQALAVSLPSLVANVIFLIKETSVFSIVA 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ADL+ V   +I    +  E +L+ +  YL + + I+L    +  ++ 
Sbjct: 167 LADLMYVAKDLIGLYYETDEALLMLVLAYLIVLLPISLVARLIERRLR 214



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 44/97 (45%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V T  LAF G++ A ++G L+   +     +++ IC+VY+E+ RN P L+ ++FLY  +
Sbjct: 18  LVLTIRLAFFGILGAFVLGLLISLIKYYKIPVLSQICQVYIELSRNTPLLIQLYFLYFGL 77

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             +  +    +    G+          +      A  
Sbjct: 78  PKIGIVLSSEMCAVVGLIFLGGSYMAESFRSGLEAIS 114


>gi|254473461|ref|ZP_05086858.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
 gi|211957577|gb|EEA92780.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
          Length = 236

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 2/188 (1%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +   E + +A   +Y + F   GLP L+ + L Y             F         F++
Sbjct: 48  KKSQEPSLRAAANVYTTIF--RGLPELLTLFLVYYGGQILIQQVLSLFGDIYFEVNAFIA 105

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             IALS   +++ +E   S   A+ +GQ E A ALGL +    RLV+LPQ +R  +P L+
Sbjct: 106 GMIALSLVFSSYASEAFLSAFRAIKQGQYEGAAALGLGYAHTMRLVILPQLVRLALPALS 165

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +L LLK +SL   +G AD++         T +      +   IYL L+++ +  ++RL
Sbjct: 166 NLWLILLKETSLVSIIGLADIIRYSNMAARTTKEPFLFFSVACAIYLVLAVISSGGISRL 225

Query: 389 NAKIALKE 396
           +A     E
Sbjct: 226 DAWAKRGE 233


>gi|126434727|ref|YP_001070418.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126234527|gb|ABN97927.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. JLS]
          Length = 226

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 6/226 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              +       T+       V + +LG VL+       R         L   Y++     
Sbjct: 7   YRAQIFEAFWTTIQLTVYSAVGALILGTVLAGI-----RLSPVPMLSWLGTAYVNVIRNT 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L TL+++   + +     +         S     F    + L+ YTA+F+ E VRSG+ 
Sbjct: 62  PL-TLIILFCSFGVSQTLGITLVDPQSSTSIEDSNFRLAVLGLTVYTASFVCETVRSGVN 120

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP GQ EAA +LGLT  +  R++LLPQA RS+I PL S  + L KN+++A A+G A+  
Sbjct: 121 TVPLGQAEAARSLGLTFSQNLRMILLPQAFRSVIIPLGSVLIALTKNTTIASAIGVAEAA 180

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +I  T   + +  I+   ++ L++ + L    L  ++A+  
Sbjct: 181 LLMKEMIENTAALLVVGSIFALGFIILTLPLGLVFGWLGKRLAVAR 226



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I   F  T  L     + A I+GT++   RLS   +++W+   YV V RN P  ++
Sbjct: 7   YRAQIFEAFWTTIQLTVYSAVGALILGTVLAGIRLSPVPMLSWLGTAYVNVIRNTPLTLI 66

Query: 145 IFFLYKSVLSV 155
           I F    V   
Sbjct: 67  ILFCSFGVSQT 77


>gi|291518712|emb|CBK73933.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 157

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 1/154 (0%)

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
            L+  + F  P +     + GS     F +  +A     A + +EI R G+ ++P+GQ E
Sbjct: 1   MLQLLIIFYGPGIFFGTNLWGSGDGGRFTAALVAFVFNYACYFSEIFRGGIQSIPKGQYE 60

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA  LGLT  +    ++L Q ++ I+PP++++ + L+K++SLA  + F +++  G   I 
Sbjct: 61  AAAVLGLTKTQTFFKIVLLQVVKRIVPPISNEVITLVKDTSLARVIAFYEIIWEGERFIK 120

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             G    +     F YL  S ++ L    +  ++
Sbjct: 121 SAGIIWPLFYTGAF-YLIFSGLLTLLFGYIEKRL 153


>gi|289677304|ref|ZP_06498194.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 201

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 6/192 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ + S  L IVL L    L R    +    L  LY  + ++ G+P LVLI L + 
Sbjct: 14  WLTLQLALSSMALAIVLGLIGVAL-RLSPVRWIAWLGDLY--STVVRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    V     F     + P  M+    L     A+++E  R   +A+P+GQ EA +
Sbjct: 71  GGQDLLNRVAPLLGFDDYIDLDP-LMAGICTLGFIFGAYLSETFRGAFMAIPKGQAEAGM 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A GL+  K    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGLSSGKVFFRILVPQMIRLAIPGFTNNWLVLTKATALISVVGLQDMMFKAKQAADATR 189

Query: 362 QAIEIILIWMFI 373
           +     L    +
Sbjct: 190 EPFTFFLAVAAM 201



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/68 (36%), Positives = 35/68 (51%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  LA S M  A ++G +  A RLS  + +AW+  +Y  V R IP LV+
Sbjct: 5   YGAVILEGAWLTLQLALSSMALAIVLGLIGVALRLSPVRWIAWLGDLYSTVVRGIPDLVL 64

Query: 145 IFFLYKSV 152
           I  ++   
Sbjct: 65  ILLIFYGG 72


>gi|238924363|ref|YP_002937879.1| putative ABC-type polar amino acid transport system, permease
           protein [Eubacterium rectale ATCC 33656]
 gi|238876038|gb|ACR75745.1| predicted ABC-type polar amino acid transport system, permease
           protein [Eubacterium rectale ATCC 33656]
 gi|291525137|emb|CBK90724.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium rectale DSM 17629]
 gi|291529374|emb|CBK94960.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium rectale M104/1]
          Length = 218

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 94/226 (41%), Gaps = 12/226 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
               +    +S    T +      +FS  LG++ +     LSR    K      ++ +  
Sbjct: 1   MFWTVTQALMSGLWTTFEIFILTLIFSLPLGLIFAFGL--LSRFKPVK-----AVMNVFV 53

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++I G P ++ + + +      P L     I     +    +  +A     A + + I R
Sbjct: 54  WVIRGTPLMLQLIIIFY----GPGLWLHQAIWSGDETGRITATVVAFVINYACYFSVIFR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+  VP GQ EA   LG+T ++    + L Q ++ ++PP++++ + L+K++SLA  +  
Sbjct: 110 GGIEGVPAGQREAGQVLGMTKQQIFFKITLLQMIKRVVPPMSNEIITLVKDTSLARIIAA 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L   G   +   G    +       YL    ++ L  N +  K+
Sbjct: 170 YELTFAGAAFMKSDGLTWPLFYT-GVFYLVFVGILTLLFNYIEKKL 214



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +   A++ G   TF +    +I +  +G +   G LS  K V  +  V+V V R  P +
Sbjct: 3   WTVTQALMSGLWTTFEIFILTLIFSLPLGLIFAFGLLSRFKPVKAVMNVFVWVIRGTPLM 62

Query: 143 VVIFFLYKSVLSVLPIPDH 161
           + +  ++      L     
Sbjct: 63  LQLIIIFYGPGLWLHQAIW 81


>gi|154508314|ref|ZP_02043956.1| hypothetical protein ACTODO_00811 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797948|gb|EDN80368.1| hypothetical protein ACTODO_00811 [Actinomyces odontolyticus ATCC
           17982]
          Length = 290

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 114/265 (43%), Gaps = 8/265 (3%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +  R+I   +    +   VL  + +           F N +        +     + +  
Sbjct: 28  QTVRSILISLASTIVVAGVLIAVVVHSDGWEATRNTFFNGKYFIEAFPQVLAGLWLNIRI 87

Query: 194 FVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            ++ ++ +++FAT L+           P+ +++         +  + + Y + F  P L 
Sbjct: 88  LLISVLGVAVFATLLAAARTLAGPVFFPIRFLAAAYTDIFRGVPFLVVLYLIGFGIPALN 147

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                  +T  P      +AL    ++++AE++R+GL +V   Q  AA +LGL+H +  R
Sbjct: 148 P------TTRIPTAFLGTVALILTYSSYVAEVLRAGLDSVHPSQRYAARSLGLSHGQTLR 201

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           ++++PQA+R + P L + ++++ K+  L   +G  D +     +  +T   +   ++   
Sbjct: 202 MIIVPQAIRKVTPALMNDFISMQKDVGLISVLGAVDAIRSAQMVQAKTYN-MTSYVVAGL 260

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +++ LS       +   A++  +E+
Sbjct: 261 LFIILSFPFIRLSDWYTARLRKREQ 285


>gi|223039434|ref|ZP_03609722.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter rectus RM3267]
 gi|222879230|gb|EEF14323.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter rectus RM3267]
          Length = 217

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 88/234 (37%), Gaps = 18/234 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        +     T+  +    + S ++GI  +L      +          P++
Sbjct: 1   MDFEFIKEFTQMFVKAGIFTVKLSLYGILLSLIIGIFCTLVKFYKIKVL-------TPVI 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +    P L+ +   Y                       F      L+    +++A
Sbjct: 54  NGYIEVSRNTPLLIQLFFLYY-----------GLSKFGLNLSAFTCAVTGLAFLGGSYMA 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R G  AV + Q+EAA+++ LT  +  R V+LPQA    IP + +  + L+K +S+  
Sbjct: 103 ESFRLGFEAVKKTQIEAALSVALTQGQILRYVILPQAFSVSIPSIAANVIFLIKETSVVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   DLV     II       E + + +  YL + + I+L +  L  ++ +  
Sbjct: 163 IIALPDLVYATKDIIGLYYMTDEALFMLVVSYLIIILPISLVLFWLEKRMRVGR 216



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 35/76 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     +    +   + T  L+  G++ + IIG      +    K++  +   Y+EV 
Sbjct: 1   MDFEFIKEFTQMFVKAGIFTVKLSLYGILLSLIIGIFCTLVKFYKIKVLTPVINGYIEVS 60

Query: 137 RNIPPLVVIFFLYKSV 152
           RN P L+ +FFLY  +
Sbjct: 61  RNTPLLIQLFFLYYGL 76


>gi|254470837|ref|ZP_05084240.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
 gi|211959979|gb|EEA95176.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
          Length = 222

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 14/225 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + +           +I VFS ++GI L++      R+      +   L  +   +    
Sbjct: 12  WQEIPQLAEGAIVTLQIAVFSMLIGITLAVLLAVARRNEGSIASR---LASVWIEVARNT 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ I L Y           F           + ++  A++   A ++AEI+R G  +V
Sbjct: 69  PCLLQIYLAY-----------FGLGALGINISSYAAVLGAIAFNNAGYLAEILRGGFNSV 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q  AA +LG+   +    V+LPQ  R    P+ +Q +  L N+SL + +G  +L   
Sbjct: 118 PQTQYAAARSLGMNSFRVYSYVVLPQVFRVTFRPIMNQSMWALLNTSLGMVIGLKELTGA 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +++ +  E  L+   +Y  ++ +I      +  +     +
Sbjct: 178 TQFAQSRSFRTFEFFLVAAAMYYVIAKIILGLAALVQWRFLKGGR 222



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  +A   M+    +  L+   R +   + + +  V++EV RN P L+ I+  
Sbjct: 18  LAEGAIVTLQIAVFSMLIGITLAVLLAVARRNEGSIASRLASVWIEVARNTPCLLQIYLA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + ++         +   +  NN
Sbjct: 78  YFGLGALGINISSYAAVLGAIAFNN 102


>gi|293365030|ref|ZP_06611747.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307702259|ref|ZP_07639219.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|291316480|gb|EFE56916.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307624272|gb|EFO03249.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 225

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +  T  SR             +++ F +  +  +
Sbjct: 19  LQGLGVTIGISILSVLLSMIFGTVMGIIMTSHSRVIR----------FLTRFYLEFIRIM 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 69  PQLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNFQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCFPISKLSTHLEKH 222



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 37/68 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + I GT++G    S ++++ ++ R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMIFGTVMGIIMTSHSRVIRFLTRFYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|293364949|ref|ZP_06611666.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307703200|ref|ZP_07640146.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
 gi|291316399|gb|EFE56835.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|307623275|gb|EFO02266.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus oralis ATCC 35037]
          Length = 219

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 90/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY   +  I+   ++L  +
Sbjct: 182 PEQVFSLYILIALIYFIFNFAISSLSHKLAKR 213



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|94988718|ref|YP_596819.1| histidine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94992541|ref|YP_600640.1| histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS2096]
 gi|94542226|gb|ABF32275.1| histidine transport system permease protein [Streptococcus pyogenes
           MGAS9429]
 gi|94546049|gb|ABF36096.1| Histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS2096]
          Length = 213

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + + S  LG +L+            K  +    LY+  +++ G P L
Sbjct: 12  LDGALVTLQVFFIVIILSIPLGTILAFLM-----KIPFKPLQWFLTLYV--WMMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +   ++  + 
Sbjct: 174 AANRDA-TLAPMFIAGLIYLLLIGLVTIISKQVEKRF 209



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 36/100 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  +I +  +GT++        K + W   +YV + R  P L+ + F 
Sbjct: 11  LLDGALVTLQVFFIVIILSIPLGTILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D          LN              A 
Sbjct: 71  YYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAI 110


>gi|15889637|ref|NP_355318.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157535|gb|AAK88103.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 229

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 5/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              +              + V S  +G VL++     ++    +  K L   Y + F   
Sbjct: 5   WVAKYWPLLLSGAWQTLALLVISVSIGFVLAIGL-AFAQVSGGRVTKILARAYCTFF--R 61

Query: 231 GLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P L+ + L Y     F   + G         +   F    ++ +   AA+ AE++R  
Sbjct: 62  GTPLLIQLWLLYYGVGSFLPMIPGLRQSFMWPVLREGFFFAAVSFTLNYAAYEAEVLRGA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L+AVP+G++EA  A G+      R + LP+A+R  +P +T + +  LK + LA  V   D
Sbjct: 122 LLAVPKGELEAGRAFGMGRFTLIRRIWLPRAIRIALPTITGEVVMQLKATPLAFTVTVMD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L +V   +   T    E +++    YL L+ +IA     +  ++ ++ 
Sbjct: 182 LYAVAYKVRQDTLLVYEPLIVVTVFYLILTAIIARCFGLVERQVPVRR 229



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 34/104 (32%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  L    +    ++   +   ++S  ++   + R Y   FR  P L+ 
Sbjct: 9   YWPLLLSGAWQTLALLVISVSIGFVLAIGLAFAQVSGGRVTKILARAYCTFFRGTPLLIQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           ++ LY  V S LP+            L               A 
Sbjct: 69  LWLLYYGVGSFLPMIPGLRQSFMWPVLREGFFFAAVSFTLNYAA 112


>gi|222082709|ref|YP_002542074.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727388|gb|ACM30477.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 220

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 11/221 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  ++        +F+  ++ +L    ++     K+G       +   +I  LP L
Sbjct: 11  WRSFDQLLEGLLLSLGLAFISILIGALIGLLVAFALTAKSGWVRRPAALYVTIIRNLPIL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+   Y        L Q  F  G        S    LS Y+ A++AE+ R+GL+++P+G
Sbjct: 71  VLVLFAYF------ALPQMGFRIGKVQ-----SFIAVLSIYSGAYLAEVFRAGLLSIPKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
             EA +A+GLT  +    ++ P   R+++P L+S  ++L K++SLA A+   +L      
Sbjct: 120 LSEAGLAIGLTPMQIRVSIIAPLMFRNVLPSLSSTVISLFKDTSLAAAIAVPELTFEARK 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I  ++ + IE  L+   +Y+   +++A  M  +  ++A+  
Sbjct: 180 INVESFRVIETWLVTSGLYVFTCVVLAALMRVVERRLAVPR 220



 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 1/149 (0%)

Query: 100 AFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIP 159
           AF  ++   +IG LV     + +  V     +YV + RN+P LV++ F Y ++  +    
Sbjct: 28  AFISILIGALIGLLVAFALTAKSGWVRRPAALYVTIIRNLPILVLVLFAYFALPQMGFRI 87

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGIVLSLFATRLSRHFHEKTGKA 218
                    + + +             +     S   L I L+    R+S          
Sbjct: 88  GKVQSFIAVLSIYSGAYLAEVFRAGLLSIPKGLSEAGLAIGLTPMQIRVSIIAPLMFRNV 147

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFD 247
           LP L  +   +F   +L       +L F+
Sbjct: 148 LPSLSSTVISLFKDTSLAAAIAVPELTFE 176


>gi|116617494|ref|YP_817865.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096341|gb|ABJ61492.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 234

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 77/193 (39%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            L RH+       L  + I+      L  + L+           V     +       P 
Sbjct: 41  ALVRHYKVPVLSQLFTIMITILKGVPLILVFLLIFMVTSQNFNRVAKALGWHMHYGDLPM 100

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            +   I LS      ++E  R    +V   Q +AA +LG+T+ +  R VL+PQA    +P
Sbjct: 101 SLLAIIGLSLMAMVGLSEAFRGAFESVKTVQFDAARSLGMTNLQTIRRVLIPQAFPVALP 160

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +  +NL+K +++A  +   ++ S      +   +  E  +    IY  ++I+I    
Sbjct: 161 MIINMLINLIKGTAIASLISVVEIFSTATQAASSNYKYFEAYIAAAIIYWLMTIVIERAA 220

Query: 386 NRLNAKIALKEKK 398
             L  ++  K ++
Sbjct: 221 VLLEGRMDKKTRR 233


>gi|315612796|ref|ZP_07887707.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315314906|gb|EFU62947.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 225

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 90/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +        +H +  + L   Y+    I      
Sbjct: 19  LQGLGVTIGISILSVLLSMIFGTVMGIIM-----TYHSRVIRFLTRFYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNFQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCFPISKLSTHLEKH 222



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 36/68 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + I GT++G      ++++ ++ R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMIFGTVMGIIMTYHSRVIRFLTRFYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|262068033|ref|ZP_06027645.1| amino acid ABC transporter, permease protein [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378255|gb|EFE85773.1| amino acid ABC transporter, permease protein [Fusobacterium
           periodonticum ATCC 33693]
          Length = 219

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +GI+LS+    L      +  K    + I    L    P LV +   + L++  P +   
Sbjct: 26  IGIMLSIVVGILGSWVLYENFKFFKQIIIGYVELSRNTPLLVQL---FFLYYGLPKI--- 79

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
               G   SPE     I L+    +++ E  RS L  + + Q E+A++LG+T  +  R V
Sbjct: 80  ----GIKFSPEL-CGIIGLTFLGGSYMIETFRSALETIDKIQKESALSLGMTKWQTMRYV 134

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQ+    +P LT+  + +LK +S+  A+   D++ V   +I    +  E + + +  Y
Sbjct: 135 ILPQSFVISLPGLTANIIFMLKETSVFSAISLIDMMFVTKDLIGLYYKTEESLFMLVVGY 194

Query: 375 LSLSIMIALFMNRLNAKIA 393
           L + + ++LF   L  K+ 
Sbjct: 195 LIILLPLSLFGVWLERKLK 213


>gi|153011343|ref|YP_001372557.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563231|gb|ABS16728.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 224

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 14/184 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + S   G++  L    + R +  K  + L + YI  F    +  +VLI + Y L F
Sbjct: 28  FLIGIASIFFGVLSGLLI-SIVRIYGPKVLRYLAIAYIDVFRAMPV-LVVLILIYYALPF 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              + S  ++ S   AA+ AE+ RSG+ +VPRGQ EAA ALG+ 
Sbjct: 86  I------------GIRFSAWTSAIMSFSMVMAAYSAEVFRSGIESVPRGQFEAASALGIP 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                  V+LPQA+R IIPP TS  +++ K+++LA  V   +L+               +
Sbjct: 134 FPVTLWKVVLPQAIRIIIPPTTSNCVSMFKDTALASTVALPELLKEAQDAQALYANPTPL 193

Query: 367 ILIW 370
           I   
Sbjct: 194 IGAA 197



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 39/84 (46%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  G +NTF +  + +    + G L+   R+   K++ ++   Y++VFR +P LVV+  
Sbjct: 19  ALGRGLLNTFLIGIASIFFGVLSGLLISIVRIYGPKVLRYLAIAYIDVFRAMPVLVVLIL 78

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFL 171
           +Y ++  +               +
Sbjct: 79  IYYALPFIGIRFSAWTSAIMSFSM 102


>gi|56708861|ref|YP_164902.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56680546|gb|AAV97211.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 262

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 15/235 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYIS 225
                + L      +     +   S  LG +L++   FA  +   +     +    L   
Sbjct: 33  WDWLPKYLPLAMEGLWRTVWLLAASTFLGFLLAVPLGFAQAVGPWYLAVPARVFCTL--- 89

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFI 281
              I G P L+ I L Y  +    V  Q + I  S + P     +    +AL+   A + 
Sbjct: 90  ---IRGTPLLLQIWLLY--YGLGSVFPQIDGIRDSVLWPYLRQAWPYALLALTLSFAGYE 144

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E++R     V RGQ+EAA + G+      R + LPQA+ +++P L  + +  LK + L 
Sbjct: 145 GEVMRGAFSGVNRGQLEAARSFGMPRFTLFRRIWLPQAINNVLPTLGGETILQLKATPLV 204

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   ++ +V   +   T    E +L+   +Y+ ++ +IAL    L  ++  + 
Sbjct: 205 ATITVVEIFAVSSRVRQDTFVIYEPLLLLALVYMVIAGLIALAFRWLENRVPTRR 259



 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 33/93 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T WL  +      ++   +G  +      +A   RV+  + R  P L+ 
Sbjct: 39  YLPLAMEGLWRTVWLLAASTFLGFLLAVPLGFAQAVGPWYLAVPARVFCTLIRGTPLLLQ 98

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           I+ LY  + SV P  D         +L      
Sbjct: 99  IWLLYYGLGSVFPQIDGIRDSVLWPYLRQAWPY 131


>gi|293193927|ref|ZP_06609887.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinomyces odontolyticus F0309]
 gi|292819821|gb|EFF78828.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinomyces odontolyticus F0309]
          Length = 290

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 115/265 (43%), Gaps = 8/265 (3%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +  R+I   +    +   VL  + +           F N +        + +   + +  
Sbjct: 28  QTVRSILISLASTIVVAGVLIAVVVNSDGWEATRNTFFNGKYFVEAFPQVLSGLWLNIRI 87

Query: 194 FVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            ++ ++ +++FAT L+           P+ +++         +  + + Y + F  P L 
Sbjct: 88  LLISVLGVAVFATLLAAARTLAGPVFFPIRFLAAAYTDIFRGVPFLVVLYLIGFGIPALN 147

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                  +T  P      +AL    ++++AE++R+GL +V   Q  AA +LGL+H +  R
Sbjct: 148 P------TTRIPTAFLGTVALILTYSSYVAEVLRAGLDSVHPSQRYAARSLGLSHGQTLR 201

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           ++++PQA+R + P L + ++++ K+  L   +G  D +     +  +T   +   ++   
Sbjct: 202 MIIVPQAIRKVTPALMNDFISMQKDVGLISVLGAVDAIRSAQMVQAKTYN-MTSYVVAGL 260

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           +++ LS       +   A++  +E+
Sbjct: 261 LFIILSFPFIRLSDWYTARLRKREQ 285


>gi|229588841|ref|YP_002870960.1| histidine ABC transporter permease [Pseudomonas fluorescens SBW25]
 gi|229360707|emb|CAY47565.1| histidine ABC transport system, permease protein [Pseudomonas
           fluorescens SBW25]
          Length = 236

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 91/230 (39%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ + + ++   +TM       V  FV+ I LS+     +R       +    
Sbjct: 6   QEYWRPFLYSDGQHITGLAMTMWLLTAALVIGFVVSIPLSI-----ARVSRNPLVRWPVQ 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y  T+L  G P  + + + Y   +    +     +  +          +  +  T A+ 
Sbjct: 61  FY--TYLFRGTPLYIQLLICYTGIYSIAAVRAQPVL-DAFFRDAMNCTILTFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GL+  K    V++P A+R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGSIRSMAHGEVEAAKAYGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   IYL+++  +         +
Sbjct: 178 FTATIPDILKVARDANSATFMTFQSFGIAALIYLTVTFALVGLFRLAERR 227



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + ++   ++   +   R+S N LV W  + Y  +FR  P  + +   Y
Sbjct: 20  ITGLAMTMWLLTAALVIGFVVSIPLSIARVSRNPLVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  +    ++  F     N  +    L             +
Sbjct: 80  TGIYSIAAVRAQPVLDAFFRDAMNCTILTFALNTCAYTTEIFAGSI 125


>gi|227546292|ref|ZP_03976341.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|317483334|ref|ZP_07942327.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium
           sp. 12_1_47BFAA]
 gi|227213273|gb|EEI81145.1| amino acid ABC superfamily ATP binding cassette transporter
           permease protein [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|316915216|gb|EFV36645.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Bifidobacterium
           sp. 12_1_47BFAA]
          Length = 295

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 14/242 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
              + +      + +      L    L +       V   +L  +++L   R SR     
Sbjct: 62  WPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALV--RTSRSPILF 119

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + L L+Y  T ++ G+P +V++   Y + F  P LG F  I  S +        IA+ 
Sbjct: 120 PLRILALIY--TTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVL------GTIAVV 168

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              +A+++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++
Sbjct: 169 MGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISM 228

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            K+  L   +G  D V      +  T       ++   +++ +S+   L  +    ++  
Sbjct: 229 QKDVGLISVLGAVDAVRAAQIDVASTYN-FTPYVVASLLFILMSVPFILLNDWYTERLRK 287

Query: 395 KE 396
           +E
Sbjct: 288 RE 289


>gi|154246017|ref|YP_001416975.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154160102|gb|ABS67318.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 224

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 14/202 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++     VLG+ L + A   ++    +  + L   Y+                    
Sbjct: 23  VTLELIAVGGVLGVTLGI-ACAWAKTQGPRWLRPLVEAYVELIRNTPFLI---------- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +     F          E  +  +A+     A+  EI+R+G+ A P+GQ EA  +L 
Sbjct: 72  ---QLFFIFFGLPAIGVGLTEMQAAILAMVINLGAYACEIIRAGIEATPKGQFEAGASLA 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R V+L  A++ I P L+SQ + ++  S++   +   +L      I ++T +A 
Sbjct: 129 MSRVQTFRHVVLVPALQKIWPALSSQIVIVMFGSAVCSQISVEELTFAANFIQSRTFRAF 188

Query: 365 EIILIWMFIYLSLSIMIALFMN 386
           E  ++   +YL+L++++   M 
Sbjct: 189 EAYIVATVLYLALAVLVRQVMR 210



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 38/95 (40%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S  +YA  I  G   T  L   G +    +G      +    + +  +   YVE+ R
Sbjct: 6   DFSSLGAYAPVIAKGVAVTLELIAVGGVLGVTLGIACAWAKTQGPRWLRPLVEAYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P L+ +FF++  + ++             M +N
Sbjct: 66  NTPFLIQLFFIFFGLPAIGVGLTEMQAAILAMVIN 100


>gi|115351570|ref|YP_773409.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115281558|gb|ABI87075.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 241

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 9/205 (4%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLIFGLPTLVLIALKYQL 244
                  S VL I  ++ +  L          A  PL  +    I     + ++ L +  
Sbjct: 22  PLGGAALSLVLAIASAVASAGLGVALGVAMALARGPLRVLLLAFIGFFRAIPVLMLIFWT 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+L            P   ++  AL+    A++A  V +G++A   GQ +A ++LG
Sbjct: 82  YFLLPML-------LHVDVPGLATVVCALALIGGAYLAHAVHAGIVAAGDGQWQAGLSLG 134

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QA 363
           LT  +  R VLLPQA+R + P   +Q++ L+K++SLA  VG  +L  V   + N+     
Sbjct: 135 LTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGVPELSFVATQVNNRLMVYP 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRL 388
             I L    +YL L   +      L
Sbjct: 195 APIFLFVAALYLVLCTSLDGAARWL 219


>gi|241666825|ref|YP_002984909.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240862282|gb|ACS59947.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 241

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +  +G VL       ++         L  +Y + F       L++  + +  
Sbjct: 24  MTLAVTATALAIGAVLGAIVAA-AKLSGNLVLVTLGNVYTTVFR-GVPELLIIYLIYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +GQ     G    P F++  +A+   + A+ AE+ RS  +A+ +G++EAA A+G
Sbjct: 82  SSAVTSIGQAMGYEGFLGLPSFIAGALAVGIISGAYQAEVFRSAFLAISKGELEAASAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +++PQ  R  IP L + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MHRGMRLRRIIMPQVFRLAIPGLGNVWQLSLKDSALISVTGLAELMRTSQVAAGSTRQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +YL L+ +     N    +
Sbjct: 202 LFFIAGGCLYLLLTSLSDRIFNGAERR 228



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 40/85 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   ++   + T  +  + +    ++G +V A +LS N ++  +  VY  VFR +P L++
Sbjct: 14  WGALLIAAALMTLAVTATALAIGAVLGAIVAAAKLSGNLVLVTLGNVYTTVFRGVPELLI 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           I+ +Y    S +     ++     +
Sbjct: 74  IYLIYFGGSSAVTSIGQAMGYEGFL 98


>gi|257139194|ref|ZP_05587456.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis E264]
          Length = 274

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 2/238 (0%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
           S       +      ++         +      A +  F+            R +   + 
Sbjct: 31  SNEMNAWLAPKYLMWLWQGFLLTLGLSFAAAVAATLAGFALASARHARRAWLRRAAAAYV 90

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
              +  PL+    F  FG+ +L+   +   L+  +  +     +     S EF++ ++ L
Sbjct: 91  VAFRNTPLVVQLLFWYFGVASLLPEPVMAWLNTRRAAVVG--GVELHWPSFEFVAGWVGL 148

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S YT+AF+AE  ++GL  VP GQ  AA ALGL+ R+  R V+LPQA+R  +PPL  QY+N
Sbjct: 149 SGYTSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQYMN 208

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+KNSSL +A+G A+L      +  +T +      +   +Y++    +  F      +
Sbjct: 209 LIKNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYIAAIAAVEAFAQWTARR 266


>gi|163855574|ref|YP_001629872.1| polar amino acid transport system permease protein [Bordetella
           petrii DSM 12804]
 gi|163259302|emb|CAP41602.1| polar amino acid transport system permease protein [Bordetella
           petrii]
          Length = 221

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/142 (28%), Positives = 67/142 (47%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F         P F +L IAL+   A ++AE  R GL AVP  QM AA +LG++  KA
Sbjct: 76  MAYFGLGAVGVDIPSFTALLIALTFNNAGYLAETFRGGLSAVPPTQMAAARSLGMSPTKA 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
              V+ PQ    +  P  +Q    L NSSL   +G  +L        +++ +  E  ++ 
Sbjct: 136 YVHVIFPQVFVLVFLPYMNQLNWALLNSSLGSIIGVRELTGATQAAQSESFRTFEFFIVA 195

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             +Y  +S +I++    +  ++
Sbjct: 196 AGMYYVISKLISIVAALVTWRL 217


>gi|116248748|ref|YP_764589.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253398|emb|CAK11786.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 229

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R   F    +  +  + V S ++G  + L     +     +       +Y++      +
Sbjct: 20  WRNFDFLLSGLALSLGLAVISILIGAAIGLVV-AFALTSKNRFAVVPARIYVTVIRNLPI 78

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             LVL                F          +  S  + LS Y+ A++AE+ R+GL+++
Sbjct: 79  LVLVLFVF-------------FALPQMGLRLDKIKSFVLVLSLYSGAYLAEVFRAGLLSI 125

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           PRG  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K++SLA A+   +L   
Sbjct: 126 PRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFA 185

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              I  ++ + IE  ++   +Y++   +IA  M  +  ++AL  
Sbjct: 186 ARKINVESFRVIETWMVTSALYVATCFLIAAVMRFVERRLALPR 229


>gi|182441007|dbj|BAG24132.1| probable amino acid permease [Pseudomonas cichorii]
          Length = 246

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 14/236 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           L FG  L  + L           ++ +   ++   L      L+R    +        Y+
Sbjct: 4   LMFGELLGPQYLHLLFDGFLLTLRLSILVCLIATALGFLIC-LARISSSRFWSWPARGYL 62

Query: 225 STFLIFGLPTLVLIALKYQ---------LHFDKPVLGQFNFIGGSTVSP--EFMSLYIAL 273
           S F     P LV +   Y          L     +  + N  G     P  EF++ +  L
Sbjct: 63  SLF--RNTPLLVQLFFWYFGVSALLPEDLVSWLNMPHEVNLAGLLIEWPSFEFIAGFWGL 120

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + Y++AFIAE  R+G+ +V   Q  A  A GL   +  R V+LPQA+R+ + PL  Q +N
Sbjct: 121 TLYSSAFIAEEFRAGVASVRPQQRIAGQAQGLRPVQVWRYVVLPQAVRTALGPLLGQCMN 180

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +LKNSSL +A+G A+L      +  +T +A +   I   +Y++   +I      + 
Sbjct: 181 VLKNSSLTMAIGLAELSYASRQVETETFKAFQAFGIATLLYIASIALIEAIGQVIQ 236



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 4/173 (2%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              Y   +  GF+ T  L+    + AT +G L+   R+S+++  +W  R Y+ +FRN P 
Sbjct: 11  GPQYLHLLFDGFLLTLRLSILVCLIATALGFLICLARISSSRFWSWPARGYLSLFRNTPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV +FF Y  V ++LP  D    L     +N  GL     + +  A  +  +      ++
Sbjct: 71  LVQLFFWYFGVSALLPE-DLVSWLNMPHEVNLAGLLIEWPSFEFIAGFWGLTLYSSAFIA 129

Query: 202 ---LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
                     R      G+A  L  +  +    LP  V  AL   L     VL
Sbjct: 130 EEFRAGVASVRPQQRIAGQAQGLRPVQVWRYVVLPQAVRTALGPLLGQCMNVL 182


>gi|171320702|ref|ZP_02909716.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171094062|gb|EDT39158.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 261

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 11/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      M  N  I   +  LG +  L    L         +     Y+  F     P 
Sbjct: 46  WLPALGKAMLVNIGISALAIALGTLAGLVLGPL-TLSRLGIARGAARAYVQLF--RNAPL 102

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVLI     +        +  F   +   P++  + + L+   +A  AEI R  + ++P 
Sbjct: 103 LVLIYFSTYVF-----PFEIRFGHAALPFPDWFKVTLGLALPASANFAEIFRGAIQSIPH 157

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q +AA +L  +  +  R ++LPQ +  ++PP  + Y ++   ++LA  VG  DL+    
Sbjct: 158 AQWDAARSLAFSRVQVFRWIILPQCISRMLPPWMNLYASIAMATALASLVGVHDLLDTAQ 217

Query: 355 TIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              N   +A   + +    + ++ +    IA F   L  + A
Sbjct: 218 VASNTVARADFTVVVYFTVLGLFFAYCYPIARFTRLLERRHA 259



 Score = 43.4 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 36/86 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++  A+    +    ++   +   T+ G ++G   LS   +     R YV++FRN P LV
Sbjct: 45  TWLPALGKAMLVNIGISALAIALGTLAGLVLGPLTLSRLGIARGAARAYVQLFRNAPLLV 104

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +I+F        +     ++  P   
Sbjct: 105 LIYFSTYVFPFEIRFGHAALPFPDWF 130


>gi|117621263|ref|YP_855305.1| glutamine transport system permease protein GlnP [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117562670|gb|ABK39618.1| glutamine transport system permease protein GlnP [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 220

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 13/204 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + + +   +  +    L++     T     +L +   L   +P LV + L +   F
Sbjct: 24  LAISLLAILFATLGGVGYGVLAQQGGRLT---RGVLRVYLELFRVVPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + L+ + A+ + E+VR GL ++ RGQ EA +ALGL+
Sbjct: 78  GLPIFFGLDI-------PAFWCAVLVLALWGASEVGEVVRGGLGSLARGQQEAGLALGLS 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R VLLPQA++ + PP  + Y  ++K SSLAV +G  +++ VG  II +T  ++ I
Sbjct: 131 RWQLYRHVLLPQALQRLTPPTINIYTRIIKTSSLAVLIGVVEVIKVGQQIIERTYGSLLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
             +    +  +   ++L   RL  
Sbjct: 191 YGLLFLFFFLVCYPLSLASRRLEQ 214



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + VG   T  ++   ++ AT+ G   G       +L   + RVY+E+FR +P LV ++  
Sbjct: 16  LAVGAGQTLAISLLAILFATLGGVGYGVLAQQGGRLTRGVLRVYLELFRVVPVLVWLYLF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +     +   +      +           +       +       G+ L L   +L 
Sbjct: 76  FFGLPIFFGLDIPAFWCAVLVLALWGASEVGEVVRGGLGSLARGQQEAGLALGLSRWQLY 135

Query: 209 RHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALK 241
           RH            P + I T +I      VLI + 
Sbjct: 136 RHVLLPQALQRLTPPTINIYTRIIKTSSLAVLIGVV 171


>gi|330970979|gb|EGH71045.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 236

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 93/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F + I LS+   R+SR+   +       
Sbjct: 6   QEYWKPFLYTDGVNVTGLAMTMWLLSASIAIGFCVSIPLSIA--RVSRNRWVRWPVQF-- 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    + +   +  +          +A +  T A+ 
Sbjct: 62  ---YTYLFRGTPLYIQLLICYTGIYSLAAVREQPML-DAFFRDAMNCTILAFTLNTRAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GLT  K    V++P  +R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSVLRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   I   +YL+++ ++         +
Sbjct: 178 FTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTFILVGLFRLAERR 227



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +     +   +   R+S N+ V W  + Y  +FR  P  + +   Y
Sbjct: 20  VTGLAMTMWLLSASIAIGFCVSIPLSIARVSRNRWVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  + +  ++  F     N  +   TL             +
Sbjct: 80  TGIYSLAAVREQPMLDAFFRDAMNCTILAFTLNTRAYTTEIFAGAI 125


>gi|323525257|ref|YP_004227410.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382259|gb|ADX54350.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 245

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 1/168 (0%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVR 286
           +  G+P +V   + +    +       ++       P+F+ +  ++L  YT + I E VR
Sbjct: 72  IFRGVPLIVQFFIWFFAVPELLPTAAGDWFKSLPSHPQFLLASVVSLGVYTGSRICEQVR 131

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A P GQ  AA ALGLT  +A R VLLP   R+I+ PLTS++L + KNS++A  +G 
Sbjct: 132 AGISARPVGQFHAAFALGLTRTQAYRYVLLPVTFRTILGPLTSEFLIISKNSAVASTIGL 191

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +L      +++ T Q  E  +     Y+ L+  I   M  +  + AL
Sbjct: 192 LELSGQARQLVDYTAQPYESFICVTLAYMGLNFAILRGMGWVRRRTAL 239



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 34/90 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   +L G VNT  L       A  +GT+ G  R   N+        YV +FR +P +V
Sbjct: 21  TYLDWLLSGLVNTVELTLLAFTLALAMGTVFGVLRTLPNRAARAAGAAYVSIFRGVPLIV 80

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
             F  + +V  +LP                
Sbjct: 81  QFFIWFFAVPELLPTAAGDWFKSLPSHPQF 110


>gi|134295677|ref|YP_001119412.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134138834|gb|ABO54577.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 262

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 10/224 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDT--NAKIFVFSFVLGIVLSLFAT------RLSR 209
            P  S  L FG+        +    +     A   + + V G++L++         R+  
Sbjct: 15  RPPRSHHLMFGLAPKYLSWLWQGFLVTLGLAAASALAASVGGLLLAVMRHARGAAPRMLA 74

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             +    +  PLL    F  FG+ +L+       L  +         +  +  S EF++ 
Sbjct: 75  AGYVVALRNTPLLVQLLFWYFGVASLLPDTWIAWL--NARHRLDIGPLTLAWPSFEFVAG 132

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
           ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  
Sbjct: 133 WVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFG 192

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           QY+NL+KNSSLA+A+G A+L      +  +T +      I   +
Sbjct: 193 QYMNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAFGIATVL 236



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 4/165 (2%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y + +  GF+ T  LA +  + A++ G L+   R +       +   YV   RN
Sbjct: 24  FGLAPKYLSWLWQGFLVTLGLAAASALAASVGGLLLAVMRHARGAAPRMLAAGYVVALRN 83

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P LV + F Y  V S+LP    +  L     L+   L+    + +  A     S     
Sbjct: 84  TPLLVQLLFWYFGVASLLPDTWIAW-LNARHRLDIGPLTLAWPSFEFVAGWVGLSAYTAA 142

Query: 199 VLS---LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            ++       R  R        AL L  + +     LP  V IAL
Sbjct: 143 FVAEECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 187


>gi|301793878|emb|CBW36273.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae INV104]
          Length = 225

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIEISILSVLLSMMFGTVMGIIM-----TSHSRIIRFLTRLYLDFTRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + + AA + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGAAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCYPISKLSTHLEKH 222



 Score = 43.4 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + + GT++G    S ++++ ++ R+Y++  R +P LV++F +
Sbjct: 18  ILQGLGVTIEISILSVLLSMMFGTVMGIIMTSHSRIIRFLTRLYLDFTRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|270263423|ref|ZP_06191692.1| transporter [Serratia odorifera 4Rx13]
 gi|270042307|gb|EFA15402.1| transporter [Serratia odorifera 4Rx13]
          Length = 221

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              +      + T  ++   + ++G+ L +    +      ++GKA  L +I    +  +
Sbjct: 11  WPYMPELLAGLLTTIELTALATLMGVALGICGAAI------RSGKANLLSHIWGIYVEVV 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                +   + + F  P LG     G         +  +A+     A+  EI+R+G+   
Sbjct: 65  RNTPFVVQLFFIVFGLPSLGWKLTAGQ--------AALLAMVINLGAYSTEIIRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LG +  +    ++LP +++ I P L SQ + ++  SS+   V F +L   
Sbjct: 117 PKGQWEAGRVLGFSRSQTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSFEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I ++T  + E+ L+    YL LS+++   +     + 
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLFYLLLSVLMRQLLLAAGRRF 216



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G + T  L     +    +G    A R     L++ I  +YVEV 
Sbjct: 5   LNFPALWPYMPELLAGLLTTIELTALATLMGVALGICGAAIRSGKANLLSHIWGIYVEVV 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P +V +FF+   + S+
Sbjct: 65  RNTPFVVQLFFIVFGLPSL 83


>gi|167894369|ref|ZP_02481771.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 7894]
 gi|167919031|ref|ZP_02506122.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei BCC215]
          Length = 241

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 66/235 (28%), Positives = 110/235 (46%), Gaps = 4/235 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKTG 216
            D  +   + M+L    L    L++       +  F L I       + R +   +    
Sbjct: 1   MDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS Y
Sbjct: 61  RNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLALRWPSFEFVAGWLGLSGY 118

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+K
Sbjct: 119 TSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLIK 178

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           NSSL +A+G A+L      +  +T +      +   +Y++   ++      +  +
Sbjct: 179 NSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYVAAVALVEAAAQWMLRR 233



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 9   YLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 69  LLFWYFGVAALLPEPAMAW 87


>gi|134102704|ref|YP_001108365.1| putative amino acid ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007839|ref|ZP_06565812.1| putative amino acid ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133915327|emb|CAM05440.1| putative amino acid ABC transporter permease protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 235

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 14/207 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +    LG+V + FA  L+R    +  + +  +YI  F    +     I L +   +
Sbjct: 18  IYLTLGGAALGLVFA-FAAGLARGARSRVLRGIGFVYIEFFRGAAV-----IVLAFWFVY 71

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L       G  + P   +  +ALS    A+ AE+VR  + AVP+ Q+EAA AL +T
Sbjct: 72  ALPSL-------GWQLEP-LWAGILALSLNIGAYGAEVVRGAIRAVPQAQVEAATALNMT 123

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQA  +++PP T+  + LLK S++   V   +L   G  + N T  +   
Sbjct: 124 GWQRMRRVVLPQAFVAMVPPFTNNLIELLKASAVVSVVSIPELTLQGQLVRNGTQASAAT 183

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
               +  Y  ++++    M  +  + A
Sbjct: 184 FGGLLIGYGLIALVFVGLMRIVEFRAA 210



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 32/67 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T +L   G     +     G  R + ++++  I  VY+E FR    +V+ F+ 
Sbjct: 10  LLEGALYTIYLTLGGAALGLVFAFAAGLARGARSRVLRGIGFVYIEFFRGAAVIVLAFWF 69

Query: 149 YKSVLSV 155
             ++ S+
Sbjct: 70  VYALPSL 76


>gi|260663041|ref|ZP_05863934.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|260552662|gb|EEX25662.1| amino acid ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
          Length = 229

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 19/226 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +  +  + V  F L  VL +    L R    +        YIS   + G+
Sbjct: 20  FDSLPTILSGLPMSLFLLVVCFALANVLGILIM-LMRISSHRFLSWPARFYISF--LRGI 76

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV++ + Y                         +  ++ +   AAFIAE  RS  + V
Sbjct: 77  PMLVILFITYFGF----------------NMAALPAAILSFTIAPAAFIAEYYRSAFLGV 120

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ EAA +LGL +      V+LPQA R  +P L +  L+L K +SLA  +  +++   
Sbjct: 121 DEGQFEAARSLGLPYHNIILNVILPQAFRIALPSLGNVMLDLFKGTSLAAMITVSEMFME 180

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +       + I ++   IY  +  +++   + L   +A   K+
Sbjct: 181 AKVVAGAAQDYMSIYIVVAVIYWLVCCLLSFGQSFLEGHLATWSKE 226



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   + +L       A ++G L+   R+S+++ ++W  R Y+   R IP LV++F  
Sbjct: 26  ILSGLPMSLFLLVVCFALANVLGILIMLMRISSHRFLSWPARFYISFLRGIPMLVILFIT 85

Query: 149 YKSV 152
           Y   
Sbjct: 86  YFGF 89


>gi|254389484|ref|ZP_05004711.1| glutamate transport system permease protein gluC [Streptomyces
           clavuligerus ATCC 27064]
 gi|294815861|ref|ZP_06774504.1| Putative glutamate ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
 gi|326444203|ref|ZP_08218937.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197703198|gb|EDY49010.1| glutamate transport system permease protein gluC [Streptomyces
           clavuligerus ATCC 27064]
 gi|294328460|gb|EFG10103.1| Putative glutamate ABC transporter permease [Streptomyces
           clavuligerus ATCC 27064]
          Length = 214

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++  FS +L + L  F     R       +A+  ++++      L  L    L     F
Sbjct: 19  VELTFFSSLLALALG-FLMAGFRVAPVGALRAIGTVWVTVLRNTPLTLLFFAVLLGLPRF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V P  +   +AL CYT+AFI E +RSG+  VPRGQ EAA +LG++
Sbjct: 78  GL-------------VLPFTVFAVLALGCYTSAFICEALRSGINTVPRGQGEAARSLGMS 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +   +V+LPQA R++IPP+ S  + L KNS++A A    +L+S   T+       +  
Sbjct: 125 FGQTLTVVILPQAFRTVIPPVGSTLIALAKNSAIAGAFSVTELLSTYKTLSELGYNIVWT 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+   N L  +  +  
Sbjct: 185 FVWIAVGYLIITLTISALFNVLEKRYGVAR 214



 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L F   + A  +G L+   R++    +  I  V+V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTFFSSLLALALGFLMAGFRVAPVGALRAIGTVWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|167587240|ref|ZP_02379628.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 240

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 194 FVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            V G+ LS+      R        +  T +  PLL    F  FG+ +L+       L+  
Sbjct: 31  IVGGLALSILRHTRRRVLRAAVAAYVVTFRNTPLLVQLLFWYFGVASLLPDTWVAWLNAG 90

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
                    +   +   EF++ ++ LS YTAAF+AE   +GL  VP  Q +AA ALGLT 
Sbjct: 91  HAWHAGPFTLAWPSF--EFVAGWVGLSAYTAAFVAEECEAGLRGVPLAQRDAAAALGLTP 148

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +A R V+LPQA+R  +PPL  Q +NL+KNSSLA+A+G A+L      +  +T +     
Sbjct: 149 LQALRYVILPQAVRIALPPLFGQTMNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAF 208

Query: 368 LIWMFI 373
            +   +
Sbjct: 209 GVATVL 214



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 1/117 (0%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  L+ +  + A + G  +   R +  +++      YV  FRN P LV 
Sbjct: 8   YLSWLCQGFLLTLGLSAASALAAIVGGLALSILRHTRRRVLRAAVAAYVVTFRNTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           + F Y  V S+LP    +  L  G   +    +    + +  A     S      ++
Sbjct: 68  LLFWYFGVASLLPDTWVAW-LNAGHAWHAGPFTLAWPSFEFVAGWVGLSAYTAAFVA 123


>gi|322376965|ref|ZP_08051458.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282772|gb|EFX59779.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 225

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIGISILSVLLSMIFGTVMGIIM-----TSHSRIVRFLTRLYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNIQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCFPISKLSTHLEKH 222



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + I GT++G    S +++V ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMIFGTVMGIIMTSHSRIVRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|266625817|ref|ZP_06118752.1| ABC transporter, permease protein, polar amino acid uptake family
           [Clostridium hathewayi DSM 13479]
 gi|288862281|gb|EFC94579.1| ABC transporter, permease protein, polar amino acid uptake family
           [Clostridium hathewayi DSM 13479]
          Length = 200

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 76/188 (40%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R         +  +++S      +  L+ +A                     +V P  + 
Sbjct: 8   RRAKTPVVSQICAVFVSFMRGVPMVILLYVAYYALPVMVYSYGVSIGREFDVSVVPPAVY 67

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL+   AA+ +EI R+ L AV  GQ EAA ++G+T  +A   ++ PQAM   +P L 
Sbjct: 68  AIAALTLDQAAYSSEIFRAALGAVDEGQREAAYSVGMTKLQAMTRIVFPQAMAVAMPNLG 127

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             +L L+K +SLA  VG  ++ +    +       IE  LI   IY  +S         +
Sbjct: 128 GLFLGLVKGTSLAYYVGVYEITATANLLAMPALNFIEAYLITTVIYELISFFFNRLFGTV 187

Query: 389 NAKIALKE 396
             ++    
Sbjct: 188 ETRLKRFR 195


>gi|297156307|gb|ADI06019.1| putative glutamate ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 214

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++ +L + L +           +     PL    T  +  L    L  L + +  
Sbjct: 19  VELTVYASLLALALGVLMA------GFRVAPVAPLRVFGTAWVTVLRNTPLTLLFFAVML 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P            V P F    +AL CYT+AFI E VRSG+  VP GQ EAA +LG+ 
Sbjct: 73  GLP--------RFGLVLPFFTFAVLALGCYTSAFICEAVRSGINTVPVGQGEAARSLGMN 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA R++IPP+ S  + L KNS++A +    +L+     +  +    I  
Sbjct: 125 FPQTLGSVVLPQAFRTVIPPIGSTLIALAKNSAIAGSFSVTELLGTYKPLNERGYSIIWT 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+   + L  +  +  
Sbjct: 185 FVWIALGYLIITLAISALFHVLERRWGVPR 214



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A  +G L+   R++    +      +V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASLLALALGVLMAGFRVAPVAPLRVFGTAWVTVLRNTPLTLLFFAVMLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|239834534|ref|ZP_04682862.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822597|gb|EEQ94166.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 220

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 18/208 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   +F   LG+V++L      + +  +    L   YI   +I G P LV +   + L
Sbjct: 23  CWALGTLFGMALGLVIALV-----QRYGPRPVSWLIQAYIE--IIRGTPFLVQL---FVL 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  P++                +  + L+ Y + + AEI R+G +AVP GQ+EAA A+G
Sbjct: 73  YYGGPLI--------GLRLEALTAGLVGLTVYGSPYFAEIFRAGFLAVPAGQLEAARAIG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R +LLP  + S +P L +  + L K + +   +   +L+     +  +T + +
Sbjct: 125 MSEPTIVRRILLPLGLVSALPALVNFSIILTKETVILSIITVPELMYSVQRMSTETFRYL 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           E  L+    + +L   I+     L A+I
Sbjct: 185 EANLVLALFFWALVETISRAGRWLEARI 212



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 7/206 (3%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y   +  GF  T      G +    +G ++   +    + V+W+ + Y+E+ R  P L
Sbjct: 7   EQYWPILSNGFALTILCWALGTLFGMALGLVIALVQRYGPRPVSWLIQAYIEIIRGTPFL 66

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V +F LY     +    +       G+ +               A            + +
Sbjct: 67  VQLFVLYYGGPLIGLRLEALTAGLVGLTVYGSPYFAEIFRAGFLAVP-AGQLEAARAIGM 125

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R      G    L  +  F I      V++++        P L  ++    ST 
Sbjct: 126 SEPTIVRRILLPLGLVSALPALVNFSIILTKETVILSII-----TVPELM-YSVQRMSTE 179

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSG 288
           +  ++   + L+ +  A +  I R+G
Sbjct: 180 TFRYLEANLVLALFFWALVETISRAG 205


>gi|222080874|ref|YP_002540237.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725553|gb|ACM28642.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 214

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 92/228 (40%), Gaps = 14/228 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++   L      +     + + SF +G +L++      R       +  P+ ++++  I 
Sbjct: 1   MSAADLLMFVRGLAWTTALTMGSFAIGAILAIPLLAARR------SRFFPVRFLASVAIQ 54

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +  +  I   + + F   +               F++    L    AA +AEI R  L 
Sbjct: 55  IVRAIPPILWLFIIFFGLGI--------SLFPISPFVAALAGLGLIAAANMAEIYRGALS 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++  GQ EA  AL L      R V+ PQA R  +P   S  + L+K +++A  +G  +L 
Sbjct: 107 SIHHGQWEACAALDLGRWSTMRDVVAPQAFRVALPSGASYLIGLMKETAVASTIGVTELA 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             G  +   T + +EI       Y+ LS+ +A      +A +  +  +
Sbjct: 167 YQGNQLSQLTFRGLEIFAFVGLFYIFLSLPVAWLSRLADAHLRSRVAR 214



 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 32/81 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  L         I+   + A R S    V ++  V +++ R IPP++ +F +
Sbjct: 9   FVRGLAWTTALTMGSFAIGAILAIPLLAARRSRFFPVRFLASVAIQIVRAIPPILWLFII 68

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           +  +   L      +    G+
Sbjct: 69  FFGLGISLFPISPFVAALAGL 89


>gi|165920615|ref|ZP_02219586.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA
           334]
 gi|165916817|gb|EDR35421.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA
           334]
          Length = 223

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F+I G P LV I + Y        L +   I  S +   F    IAL+  T+A+   
Sbjct: 52  VFVFIIRGTPLLVQIFIIYYGSGQFHWLRE--TILWSVLKRPFGCAVIALAINTSAYTTV 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA  
Sbjct: 110 LLRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGT 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+
Sbjct: 170 ITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKL 218


>gi|154246380|ref|YP_001417338.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
 gi|154160465|gb|ABS67681.1| polar amino acid ABC transporter, inner membrane subunit
           [Xanthobacter autotrophicus Py2]
          Length = 234

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V S   G    +    L+     + G    L+     +I   P LV + + Y  
Sbjct: 23  MTVWLSVASIAAGTFFGVV---LASLRSVRGGPVRFLVDAYVEVIRNTPFLVQLFIIY-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L                +  I ++   AA+  EI+R+G+ ++ + Q+EA  ALG
Sbjct: 78  -FGLPTL--------GFRVGAVTAALIGMTINLAAYSTEIIRAGIESIHKSQIEAGEALG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R +++  A+  + P L SQ++ ++  SS+  A+   +L +      +Q+ ++ 
Sbjct: 129 LTQLQIYRDIIILPAVAKVYPSLCSQFVLMMLASSVCSAISTPELTAAASYAQSQSYRSF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           E+ +    IYL+L++ +   +  +  ++
Sbjct: 189 EVYIAVTLIYLALALTLRGALALIGWRL 216



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  G + T WL+ + +   T  G ++ + R      V ++   YVEV RN P LV
Sbjct: 12  QYREQLFDGLLMTVWLSVASIAAGTFFGVVLASLRSVRGGPVRFLVDAYVEVIRNTPFLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +F +Y  + ++            GM +N
Sbjct: 72  QLFIIYFGLPTLGFRVGAVTAALIGMTIN 100


>gi|157150519|ref|YP_001450273.1| amino acid permease protein SP0710 [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157075313|gb|ABV09996.1| amino acid ABC transporter, permease protein SP0710 [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 225

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S VLG +  +  T  S     K  + L   Y+    I      
Sbjct: 19  LQGLGVTIGISVISVLLSMVLGTLFGIIMTSRS-----KIVRLLTRFYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G S       S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGES-------SAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT  +    V++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTKFQLYYYVIIPQVLRRLLPQAINLITRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+     I      I    + +Y  +   I+     L    +
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFLVCFPISKLAGHLEKHWS 224



 Score = 44.2 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + ++GTL G    S +K+V  + R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISVISVLLSMVLGTLFGIIMTSRSKIVRLLTRFYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|24379911|ref|NP_721866.1| putative amino acid ABC transporter, integral membrane protein
           [Streptococcus mutans UA159]
 gi|290580109|ref|YP_003484501.1| putative amino acid ABC transporter integral membrane protein
           [Streptococcus mutans NN2025]
 gi|24377890|gb|AAN59172.1|AE014984_7 putative amino acid ABC transporter, integral membrane protein
           [Streptococcus mutans UA159]
 gi|254997008|dbj|BAH87609.1| putative amino acid ABC transporter integral membrane protein
           [Streptococcus mutans NN2025]
          Length = 216

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 27/220 (12%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+  +    V S +LG +L++      R+   K  + +  +YI           
Sbjct: 14  LQGLWLTLYISFISIVLSTILGTILAVM-----RNGKNKPLRWIASIYIEFVR------- 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                      + P L     +          +   A + +T+A +AEI+R GL A+  G
Sbjct: 62  -----------NVPNLLWIFIVFLVFQMKSTPAGITAFTVFTSAALAEIIRGGLNAIDNG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q EA +A GLT+ +    ++ PQA+R ++P + SQ++ ++K++S L   +   +L     
Sbjct: 111 QTEAGLAQGLTNSQIFIYIIFPQAIRKMLPAIISQFVTVIKDTSFLYSVIALQELFGKSQ 170

Query: 355 TIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++ +     Q   +  I    Y  ++ +I+ F  RL  K
Sbjct: 171 ILMGKYFEADQVFALYGIVAVTYFIINFIISSFSRRLAKK 210



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 39/71 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +    +L G   T +++F  ++ +TI+GT++   R   NK + WI  +Y+E  RN+P 
Sbjct: 6   TPTNLNFLLQGLWLTLYISFISIVLSTILGTILAVMRNGKNKPLRWIASIYIEFVRNVPN 65

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 66  LLWIFIVFLVF 76


>gi|313113063|ref|ZP_07798698.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624614|gb|EFQ07934.1| ABC transporter, permease protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 214

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 82/197 (41%), Gaps = 13/197 (6%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LG+V++  +    +                 ++I G P ++ I + Y      P L   N
Sbjct: 27  LGLVVAFGSMSRCKPLSGAV-------KTFVWVIRGTPLMLQIIVIY----LGPGLLGMN 75

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
               S      ++  +A +   A + +EI R G+ AVP+GQ EA   LG+T  +    V 
Sbjct: 76  NPWPSGSGGRMVAAVVAFAINYACYFSEIYRGGIEAVPKGQTEAGQVLGMTKTQIFFKVT 135

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           L Q ++ I+ P+ ++ + L+K++SLA  +   +++ +      +    I  +      +L
Sbjct: 136 LLQVVKRILAPMGNEVITLVKDTSLANTIANKEIIMMAKEYSAK--GLIWPLFSTAIFFL 193

Query: 376 SLSIMIALFMNRLNAKI 392
                + L       K+
Sbjct: 194 VFVGALTLLFGWAEKKL 210


>gi|308446221|ref|XP_003087125.1| hypothetical protein CRE_25053 [Caenorhabditis remanei]
 gi|308261293|gb|EFP05246.1| hypothetical protein CRE_25053 [Caenorhabditis remanei]
          Length = 210

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 30/202 (14%)

Query: 196 LGIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +G++ S+  T   R F      + +  +  PLL    FL +GLP L              
Sbjct: 25  VGLICSILITYRVRVFDKIAKIYIELSRNTPLLIQLFFLYYGLPKL-------------- 70

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                           F    I L+    +++AE  R+GL AV +GQ+++  ++GL   +
Sbjct: 71  ----------GIKIDGFSCGVIGLTFLGGSYMAEAFRAGLQAVAKGQIDSGESIGLNPLQ 120

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             + V+ PQA+   IP + +  L L+K SS+  A+   +L+ V   +I    +  E + +
Sbjct: 121 VFQYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFL 180

Query: 370 WMFIYLSLSIMIALFMNRLNAK 391
            +  YL + + +++  + L  +
Sbjct: 181 LIMSYLIILLPVSILTSYLEYR 202


>gi|302541693|ref|ZP_07294035.1| glutamate transport system permease GluD [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302459311|gb|EFL22404.1| glutamate transport system permease GluD [Streptomyces
           himastatinicus ATCC 53653]
          Length = 286

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 24/260 (9%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +++    +   L V              ++  + L    L     A        L +  
Sbjct: 28  LVLLALIGWVIYLLVDTGQFAYRKWMPFEYVGIQELLLRGLANTLKAFALAAVLSLALGA 87

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L A RLS H   +  + L  L +  F                     PVL    F+  +
Sbjct: 88  VLAAGRLSDH---RPVRWLATLVVEFFR------------------AMPVLVMIFFVFVA 126

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  +L   L+ Y  + +AE+ R+G+ AV RGQ EAA +LGL   +    VL+PQ +
Sbjct: 127 LKVQPLPALVTGLTLYNGSVLAEVFRAGVAAVDRGQREAAYSLGLRKTQVMTYVLVPQGV 186

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI---YLSL 377
           R+++P + SQ +  LK++SL   + + + +  G  I +     +  I + M I   Y+ +
Sbjct: 187 RAMLPAIISQLVVALKDTSLGFLITYEEFLHAGKLIASNLDYDLPFIPVVMVISPVYIGM 246

Query: 378 SIMIALFMNRLNAKIALKEK 397
            ++++   N +  +     K
Sbjct: 247 CMLLSWCANWVAKRQRRSVK 266



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 20/130 (15%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG-IVPYTSD 82
             +    +I  L+L  +  W +                  L +   F   +     Y   
Sbjct: 17  RRHRLYGVIATLVLLALIGWVIY----------------LLVDTGQFAYRKWMPFEYVG- 59

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +L G  NT        + +  +G ++ AGRLS ++ V W+  + VE FR +P L
Sbjct: 60  --IQELLLRGLANTLKAFALAAVLSLALGAVLAAGRLSDHRPVRWLATLVVEFFRAMPVL 117

Query: 143 VVIFFLYKSV 152
           V+IFF++ ++
Sbjct: 118 VMIFFVFVAL 127


>gi|161521798|ref|YP_001585225.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189352040|ref|YP_001947667.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
 gi|160345848|gb|ABX18933.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189336062|dbj|BAG45131.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 221

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +    LT+   A   +   +LG VLSL     SR       +     Y+  F   
Sbjct: 11  YWWVLVKGLGLTLAYTATCAIVGSLLGFVLSLLRMSPSR-----WLRGPVAAYVEFF--R 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P L+ +   + + F  PV+ +          P ++S+ I+L+ Y AA  +E  R  L 
Sbjct: 64  GTPLLIQL---FWVFFCFPVVLRLPI-------PPYLSVLISLTLYMAAITSETFRGSLK 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++   Q +A IAL L+       V+ PQA+   IPPL S  ++L K S+L  +VG ADL+
Sbjct: 114 SIAGEQHDACIALSLSPHVKIVYVIFPQALLRAIPPLLSNVVSLFKESALISSVGIADLM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            VG  + N T + +E +     IY  ++  +   +  + +++  +
Sbjct: 174 FVGQNVSNSTARPVEFLTTVAVIYFLVAFPLTRLVGVVESRMLRR 218



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 39/87 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   ++ G   T     +  I  +++G ++   R+S ++ +      YVE F
Sbjct: 3   LDFSVVWPYWWVLVKGLGLTLAYTATCAIVGSLLGFVLSLLRMSPSRWLRGPVAAYVEFF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           R  P L+ +F+++     VL +P    
Sbjct: 63  RGTPLLIQLFWVFFCFPVVLRLPIPPY 89


>gi|154705949|ref|YP_001424930.1| hypothetical protein CBUD_1592 [Coxiella burnetii Dugway 5J108-111]
 gi|154355235|gb|ABS76697.1| hypothetical protein CBUD_1592 [Coxiella burnetii Dugway 5J108-111]
          Length = 223

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F+I G P LV I + Y        L +   I  S +   F    IAL+  T+A+   
Sbjct: 52  VFVFIIRGTPLLVQIFIIYYGSGQFHWLRE--TILWSVLKRPFGCAVIALAINTSAYTTV 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA  
Sbjct: 110 LLRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGT 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+
Sbjct: 170 ITLMDIMGVTRHLIAMTYEVIPLFFLVGIIYFVLNALIMSVFYFLEKKL 218


>gi|86360897|ref|YP_472784.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284999|gb|ABC94057.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 220

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 18/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +    +G+V++   T  SR        AL    +   +I  LP LVL+   +    
Sbjct: 29  VISILIGAAIGLVVAFALTSTSRF-------ALVPARVYVTVIRNLPILVLVLFAF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          +  S  + LS Y+ A++AE+ R+GL+++PRG  EA +A+GLT
Sbjct: 78  -------FALPQMGLRLDKMKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ P  +R+++P L+S  ++L K++SLA A+   +L      I  ++ + IE 
Sbjct: 131 AMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFRVIET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++   +Y++   +IA  M  +  ++AL  
Sbjct: 191 WMVTSALYVATCFLIAALMRLVERRLALPR 220


>gi|311104487|ref|YP_003977340.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 5 [Achromobacter
           xylosoxidans A8]
 gi|310759176|gb|ADP14625.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 5
           [Achromobacter xylosoxidans A8]
          Length = 237

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 85/215 (39%), Gaps = 6/215 (2%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+      ++ +  +G   +L   R            +  +  ++        LV    
Sbjct: 16  MTIQVAVCAYLLALAIGTFFALITLR------PTLLARIIWIPYASIFTGVPSLLVGFLF 69

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y        L     +G       FM+   AL     A++A+++RS +  VP GQ EAA
Sbjct: 70  YYGGSEIVASLLAPFGVGQRVEITPFMAAVAALGMVYGAYLADLIRSAIQNVPHGQFEAA 129

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
             L +        V+LPQ +R  +P +T+ ++ +LK+++L   +G  ++++        T
Sbjct: 130 RVLLVPRTTIWLKVILPQMLRLALPGMTNMWIVVLKDTALISLIGLKEIMAYAKLASGVT 189

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            +     L+    +L+++ +      R+    A  
Sbjct: 190 KEPFVYYLLAAAFFLTMTWLTYYVARRVETWAARG 224


>gi|300697249|ref|YP_003747910.1| amino acid ABC transporter permease [Ralstonia solanacearum
           CFBP2957]
 gi|299073973|emb|CBJ53510.1| Amino acid ABC transporter, permease protein [Ralstonia
           solanacearum CFBP2957]
          Length = 227

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 85/210 (40%), Gaps = 11/210 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            N  I + +  LG V  L    L R    +  + L   Y+          LV     Y +
Sbjct: 22  VNVGISLLAVGLGTVAGLAVGAL-RLSPLRPVQRLAGGYVIALRNVPWLVLV-----YFM 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P   +    G     P+++ + +AL+   +A +AE+ R  ++++P  Q EAA +L 
Sbjct: 76  SYAVPF--EIELRGHVLPFPDWLKVTLALALPASAHVAELFRGAVLSIPSTQWEAAASLA 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTG 361
              R     ++LPQ +R ++P   +    +   ++LA  VG  DL+         +N+T 
Sbjct: 134 FRRRDILWRIVLPQCVRRMLPSWMNLVAIITMGTALASLVGVHDLLDTAQIASNTVNRTP 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +      + ++      IA    RL  +
Sbjct: 194 FTVATYFTVLGLFFLYCYPIARLTRRLEHR 223



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 42/85 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A A+L G      ++   +   T+ G  VGA RLS  + V  +   YV   RN+P LV+
Sbjct: 12  WAPALLRGLSVNVGISLLAVGLGTVAGLAVGALRLSPLRPVQRLAGGYVIALRNVPWLVL 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++F+  +V   + +  H +  P  +
Sbjct: 72  VYFMSYAVPFEIELRGHVLPFPDWL 96


>gi|209546302|ref|YP_002278192.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539159|gb|ACI59092.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 241

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +  +G VL       ++        AL  +Y + F       L++  + +  
Sbjct: 24  MTLAVTATALAIGAVLG-AIVAGAKLSGNPFLVALGNVYTTVFR-GVPELLIIYLIYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G+     G    P F +  +A+   + ++ AE+ R   +A+ +G++EAA A+G
Sbjct: 82  SSAVTSIGKAMGYEGFLGLPSFAAGALAVGIISGSYQAEVFRGAFLAISKGELEAASAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +++PQ +R  IP L + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MHRAMRFRRIIMPQVLRLAIPGLGNVWQLSLKDSALISVTGLAELMRTSQVAAGSTRQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +YL L+ +     N    +
Sbjct: 202 LFFIAGGCLYLILTSLSDRIFNGAERR 228



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 35/71 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +++  + T  +  + +    ++G +V   +LS N  +  +  VY  VFR +P L++
Sbjct: 14  WGALLILATLMTLAVTATALAIGAVLGAIVAGAKLSGNPFLVALGNVYTTVFRGVPELLI 73

Query: 145 IFFLYKSVLSV 155
           I+ +Y    S 
Sbjct: 74  IYLIYFGGSSA 84


>gi|159904019|ref|YP_001551363.1| ABC-type amino acid transport system, permease component
           [Prochlorococcus marinus str. MIT 9211]
 gi|159889195|gb|ABX09409.1| ABC-type amino acid transport system, permease component
           [Prochlorococcus marinus str. MIT 9211]
          Length = 297

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 15/260 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+           + P              ++  L    +    + K+   S ++  ++ 
Sbjct: 32  LLRAGLGINFGWLLRPAGFALAEHSLKYSPSDSYLWAIFMGWLNSLKVIFASLLIATIIG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF------------DKP 249
                ++R  +      L   Y+S  LI  +P L+ +   Y + F               
Sbjct: 92  FLVG-IARTGNNILIGLLSSAYVS--LIRQIPLLLQLMFWYFVGFLSISNSFYPINNIVE 148

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
           +  Q     G   S EF +L + LS +T A+I+E+VR G+ +V +GQ EA  +LGL+   
Sbjct: 149 ISNQGLIFLGFNFSAEFSALLLGLSVFTGAYISEVVRGGIQSVAKGQWEAFRSLGLSETA 208

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
               V++PQA+ +I+P LTSQYLNL KNS+LA+AVG+AD+ ++  T+I QTG+A+E  ++
Sbjct: 209 GLYKVIMPQALPAILPGLTSQYLNLAKNSTLAIAVGYADIYAISDTVITQTGRAVEGFIL 268

Query: 370 WMFIYLSLSIMIALFMNRLN 389
            +  +L L+++I+  M  +N
Sbjct: 269 LLTGFLFLNLIISNLMEIIN 288



 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 81/180 (45%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R   I +Q  +   + +I    +NN+  N+ ++ L +  G+L   AGF + +  + Y+ 
Sbjct: 2   ERRKAIVLQGAICAGIFLILAILINNLSVNLLRAGLGINFGWLLRPAGFALAEHSLKYSP 61

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             SY  AI +G++N+  + F+ ++ ATIIG LVG  R   N L+  +   YV + R IP 
Sbjct: 62  SDSYLWAIFMGWLNSLKVIFASLLIATIIGFLVGIARTGNNILIGLLSSAYVSLIRQIPL 121

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+ + F Y      +    + I     +            + + +A +   S   G  +S
Sbjct: 122 LLQLMFWYFVGFLSISNSFYPINNIVEISNQGLIFLGFNFSAEFSALLLGLSVFTGAYIS 181


>gi|320547239|ref|ZP_08041532.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448127|gb|EFW88877.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 215

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 27/222 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S ++G +L++      R+      + +  +YI         
Sbjct: 11  FILQGLWLTLYISFISIVLSTIIGTILAVM-----RNGKNPVLRLISSIYIEFVR----- 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                        + P L     I          +   A + +T+A +AEI+R GL  V 
Sbjct: 61  -------------NVPNLLWIFIIFLVFQMKSTPAGITAFTVFTSAALAEIIRGGLNGVD 107

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G+TH +    ++ PQA R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 108 HGQTEAGLSQGMTHFQIFIYIVFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQELFGK 167

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++ +     Q   +  +   IY  ++  I++   RL  K
Sbjct: 168 SQILMGRYFEASQVFTLYAVIAAIYFVINFTISMISRRLAKK 209



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 39/71 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  + IL G   T +++F  ++ +TIIGT++   R   N ++  I  +Y+E  RN+P 
Sbjct: 5   TPTNISFILQGLWLTLYISFISIVLSTIIGTILAVMRNGKNPVLRLISSIYIEFVRNVPN 64

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 65  LLWIFIIFLVF 75


>gi|307704542|ref|ZP_07641449.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           SK597]
 gi|307621907|gb|EFO00937.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           SK597]
          Length = 225

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIGISILSVLLSMIFGTVMGIIM-----TSHSRIVRFLTRLYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCFPISKLSTHLEKH 222



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + I GT++G    S +++V ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMIFGTVMGIIMTSHSRIVRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|296158679|ref|ZP_06841509.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891247|gb|EFG71035.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 248

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 97/229 (42%), Gaps = 11/229 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F     L F    M     +      +GIVL      ++   + KT    P+  + T L+
Sbjct: 12  FFTRFTLEFLLEAMGRTLAMTALGCGVGIVLGTL---IAVIRYTKTRLLAPVRIVLTMLV 68

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                +  +   + + F           G  +    F    +++     AF++E++R+GL
Sbjct: 69  EVFRRIPFLVNLFIVMFALQ--------GFGSEVSLFTIATVSICIVATAFLSEVIRAGL 120

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +VPR Q+EAA  + L   +   LVLLPQ+ + I+PP  +  +  +K++SLA  +G  +L
Sbjct: 121 ESVPRQQIEAAEVMNLGFTRTLFLVLLPQSWKVILPPAFAFMVMFIKDTSLASQMGVVEL 180

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              G  ++N+      +    +  Y  LS  ++     L  ++A    +
Sbjct: 181 TFTGKVLMNRGFSPFLVYGAVLAAYFILSYPLSRLGAYLENRLASPRSR 229


>gi|302522279|ref|ZP_07274621.1| glutamate transporter permease [Streptomyces sp. SPB78]
 gi|302431174|gb|EFL02990.1| glutamate transporter permease [Streptomyces sp. SPB78]
          Length = 222

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 9/231 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L    +T+   A   V S + G VL+       R       +     YI+
Sbjct: 1   MFDFLDGYDLLGAFWVTVKLTALSAVGSLIWGTVLAAM-----RVGPVPLMRGFATGYIN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L  +    + +        L  +    G   +  F    + L  YT++F+ E V
Sbjct: 56  IVRNIPLTVI----IVFASLGLAQTLTIYLGAEGDFKAINFRLAVLGLILYTSSFVCEAV 111

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP GQ EAA ALGL+ R+   L++LPQA RS++ PL +  + L KN+++A A+G
Sbjct: 112 RSGINTVPMGQAEAARALGLSFRQVLALIILPQAFRSVVNPLANVLIALTKNTTIAAAIG 171

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   +   +I    + + I L++ F ++ L++   L +  ++ K+A+K 
Sbjct: 172 VGEAAVLMKEMIENEAELVLISLVFAFGFVVLTLPTGLILGWVSKKVAIKR 222



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     + + I GT++ A R+    L+      Y+ + RNIP  V+I F 
Sbjct: 10  LLGAFWVTVKLTALSAVGSLIWGTVLAAMRVGPVPLMRGFATGYINIVRNIPLTVIIVFA 69

Query: 149 YKSVLSV 155
              +   
Sbjct: 70  SLGLAQT 76


>gi|90418081|ref|ZP_01225993.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337753|gb|EAS51404.1| permease protein, ABC-type amino acid transporter [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 236

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 97/227 (42%), Gaps = 3/227 (1%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           F                  + + +  +G+V       L++   ++       +Y + F  
Sbjct: 10  FGPTGWGDDIAWGALVTVSLALATLPIGLVFGFLL-SLAKQSDDRYLSLSANIYTTIF-- 66

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            GLP L+ + + Y            +          F+S  IAL    +AF +E+  S  
Sbjct: 67  RGLPELLTLFVVYFGANGLLRSITQSTGLPDIALSSFVSGMIALGFVFSAFASEVFLSAF 126

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P GQ E A ALGL   +   LV+LPQ +R  +P L + ++NLLK+++L   +G AD+
Sbjct: 127 RAIPHGQREGAAALGLGPARIMILVILPQIIRIALPGLANLWMNLLKDTALVSVIGLADI 186

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   G     T +      + + +YL L+++ ++ +  ++      +
Sbjct: 187 MRQTGIAARVTREPFYFFGVAIVLYLVLTMLSSIAIGGIDRWTRRGD 233



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 10/167 (5%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++ +     +   I  G + T  LA + +    + G L+   + S ++ ++    +Y 
Sbjct: 5   WTLIGFGPTG-WGDDIAWGALVTVSLALATLPIGLVFGFLLSLAKQSDDRYLSLSANIYT 63

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
            +FR +P L+ +F +Y     +L     S  LP         ++  +      A  FVFS
Sbjct: 64  TIFRGLPELLTLFVVYFGANGLLRSITQSTGLPD--------IALSSFVSGMIALGFVFS 115

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                V  L A R   H   +   AL L      ++  LP ++ IAL
Sbjct: 116 AFASEVF-LSAFRAIPHGQREGAAALGLGPARIMILVILPQIIRIAL 161


>gi|86360356|ref|YP_472244.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
 gi|86284458|gb|ABC93517.1| octopine ABC transporter, permease protein [Rhizobium etli CFN 42]
          Length = 241

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +  +G VL +     ++        A   +Y + F       L++  + +  
Sbjct: 24  MTLAVTATALAIGAVLGVIV-AGAKLSGNPLLVAFGNVYTTVFR-GVPELLIIYLIYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G+     G    P F +  +A+   + ++ AE+ R   +A+ +G++EAA A+G
Sbjct: 82  SSAVTSIGKAMGYEGFLGLPSFAAGALAVGIISGSYQAEVFRGAYLAISKGELEAASAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +++PQ +R  IP L + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MHRGMRFRRIIIPQVLRFAIPGLGNVWQLSLKDSALISVTGLAELMRTSQVAAGSTRQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +YL L+ +     N    +
Sbjct: 202 LFFIAGGCLYLILTSLSDRIFNGAERR 228



 Score = 39.5 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 35/71 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +++  + T  +  + +    ++G +V   +LS N L+     VY  VFR +P L++
Sbjct: 14  WGALLILAALMTLAVTATALAIGAVLGVIVAGAKLSGNPLLVAFGNVYTTVFRGVPELLI 73

Query: 145 IFFLYKSVLSV 155
           I+ +Y    S 
Sbjct: 74  IYLIYFGGSSA 84


>gi|27381501|ref|NP_773030.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27354669|dbj|BAC51655.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 222

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 11/217 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +         +     +  +           K      L+     ++   P L
Sbjct: 11  WHAMPALLWGCVGTLGLALAGMTLAMMIGVAGVAARDAKAAWLRALVISFVEIVRNTPFL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I   + L F  P++       G  ++P   +  IAL     A+  EI+R G+ ++ +G
Sbjct: 71  VQI---FFLFFALPLI-------GLKLNPT-ATAIIALGVNGGAYAIEIIRGGVQSIHKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EA  ALGL   +  R ++L  A+R+  P LT Q++ L   SS+  AV   +L SV   
Sbjct: 120 QIEAGYALGLHKGQVFRFIVLKPALRASYPSLTGQFIMLTLTSSICSAVSAYELTSVAQR 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I + T ++ E+     F+YL++S ++ L    ++ + 
Sbjct: 180 IESDTFRSFEVYFSVTFLYLAISWLLMLGFAVISHRF 216



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++       A+L G V T  LA +GM  A +IG    A R +    +  +   +VE+ 
Sbjct: 5   LDFSVVWHAMPALLWGCVGTLGLALAGMTLAMMIGVAGVAARDAKAAWLRALVISFVEIV 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P LV IFFL+ ++  +
Sbjct: 65  RNTPFLVQIFFLFFALPLI 83


>gi|68535731|ref|YP_250436.1| glutamate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|260578184|ref|ZP_05846104.1| glutamate transport system permease protein GluC [Corynebacterium
           jeikeium ATCC 43734]
 gi|68263330|emb|CAI36818.1| glutamate ABC transport system, permease protein [Corynebacterium
           jeikeium K411]
 gi|258603723|gb|EEW16980.1| glutamate transport system permease protein GluC [Corynebacterium
           jeikeium ATCC 43734]
          Length = 228

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 8/235 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +       +    L    +T+       V S + GI+L+       R       + L   
Sbjct: 1   MNPELWSEMKPELLPAFWVTVKLTFFSAVGSLIFGIILTAM-----RVSPVGILRNLSAW 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI+      L  ++L+A     +    +L   N          F    +A   YT+ F+A
Sbjct: 56  YINIVRNTPLTLIILLASMGLYYNLGLLLAVEN--DSFIEKQNFRLAVLAFVAYTSCFVA 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +RSG+  VP GQ EAA +LGL+  +  R V+ PQA+R  I PL +  + L KN+++A 
Sbjct: 114 ESLRSGINTVPFGQAEAARSLGLSFGQNFRHVIFPQALRGAIVPLGNTLIALTKNTTIAS 173

Query: 343 AVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +G A+   +  T+        + I  +    ++ L++   LF      + A+K 
Sbjct: 174 VIGVAEASLLMKTLTEDYASDILVIFGVIAIGFIILTLPTGLFFGWAGKRWAVKR 228



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L F   + + I G ++ A R+S   ++  +   Y+ + RN P  ++I   
Sbjct: 13  LLPAFWVTVKLTFFSAVGSLIFGIILTAMRVSPVGILRNLSAWYINIVRNTPLTLIILLA 72

Query: 149 YKSVLSVLPIPDHSIVLPF 167
              +   L +        F
Sbjct: 73  SMGLYYNLGLLLAVENDSF 91


>gi|331007195|ref|ZP_08330406.1| general amino acid ABC transporter, permease protein [gamma
           proteobacterium IMCC1989]
 gi|330418990|gb|EGG93445.1| general amino acid ABC transporter, permease protein [gamma
           proteobacterium IMCC1989]
          Length = 368

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 109/260 (41%), Gaps = 14/260 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L   +    ++   L +P   I++  G  L    +S           +   + ++     
Sbjct: 118 LPKDYRNKIAIPLFLVLPFIWIIILNGKLLGLEHVSTDYWGGFALNVLMAAASIIVAFPL 177

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
            F   L R       + + ++ I  F    +     +AL +      P+     F    T
Sbjct: 178 SFLWALGRRSEMPFARTVCVILIEFFRGVPV-----LALFFMGSVMLPL-----FFPEGT 227

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
              + + ++I L  + + ++AE+ R G  A+P+GQ EAA ++GL++ +   L++LPQ ++
Sbjct: 228 NVDKLIRVWIVLILFMSGYMAEVFRGGFQAIPQGQYEAADSIGLSYWQKNLLIILPQNIK 287

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQAIEIILIWMFIYLSL 377
             +P + + ++ L KN++  + +G  +++S     +  +    G + E  +    ++   
Sbjct: 288 ISMPNILATFIMLFKNTTFLLIIGIFEILSTTQAALTNSNWLGGHSTEGYVFVALLFWIC 347

Query: 378 SIMIALFMNRLNAKIALKEK 397
              +++  N +  K+    +
Sbjct: 348 CFSMSMISNSIERKLETSHR 367


>gi|315652803|ref|ZP_07905777.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
 gi|315485005|gb|EFU75413.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Eubacterium saburreum DSM 3986]
          Length = 223

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 85/201 (42%), Gaps = 22/201 (10%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           LGI++ +        F     KA+  +Y+    I        + L + + F    +   +
Sbjct: 39  LGILVGVLM-----TFKNPILKAVLRVYLEFIRIMP-----QLVLLFIVFFGSTRVLGVD 88

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
             G        ++  I  S +  A + ++VR  +I++P+ Q E+  ALGL+ R+    ++
Sbjct: 89  ISGD-------LAAVIVFSLWGTAEMGDLVRGAIISIPKHQYESGEALGLSKRQIFIYII 141

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----GQAIEIILIW 370
           +PQ ++ ++P   +    ++K +SL + +G  +++ V   II          A  + L  
Sbjct: 142 IPQTIKRLVPLSINLITRMIKTTSLVLIIGVVEVIKVAQQIIEANRTSSPNAAFGVYLAV 201

Query: 371 MFIYLSLSIMIALFMNRLNAK 391
             +Y      I++    L  +
Sbjct: 202 FLMYFIACTPISMLARYLEKR 222


>gi|190895058|ref|YP_001985351.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700719|gb|ACE94801.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|327194399|gb|EGE61259.1| putative amino acid ABC transporter permease [Rhizobium etli
           CNPAF512]
          Length = 213

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V S ++G  +++    LS          +    I      G+P LV + L Y L  
Sbjct: 17  VTISVVSILIGFAIAIL---LSGMLLSGRSLFVRSAQIFISFFRGVPLLVQLLLIYNL-- 71

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P  ++  I LS  TAA+ AE +R G  +VP G +E+A  +GLT
Sbjct: 72  ---------LPAIGINVPSIVAAIIGLSLCTAAYQAENLRGGFASVPLGLLESAEMVGLT 122

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  R + +P A+R   P L ++ + +LK SSL   VG  +L  +   +   T   ++I
Sbjct: 123 PRQVFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELTRMAQDLAGSTFLPLQI 182

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                 IYL ++ ++AL    +  ++
Sbjct: 183 FASAGLIYLMINWLVALAGGMIENRL 208


>gi|307708869|ref|ZP_07645329.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
 gi|307620205|gb|EFN99321.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK564]
          Length = 226

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYQIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 74  ----------FGLPRVGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPIQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRLR 213



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F+ T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFLLTLHIAVWGILGSFLLGLIVSIIRHYQIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  V  +    +    G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRVGIVLSSEVCATLGLVFLGGSYMAESFRSGLEA 111


>gi|213692816|ref|YP_002323402.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213524277|gb|ACJ53024.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
          Length = 295

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 14/242 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
              + +      + +      L    L +       V   +L  +++L   R SR     
Sbjct: 62  WPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIALV--RTSRSPILF 119

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + L L+Y  T ++ G+P +V++   Y + F  P LG F  I  S +        IA+ 
Sbjct: 120 PLRILALIY--TTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSVL------GTIAVV 168

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              +A+++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R + P L + ++++
Sbjct: 169 MGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALRKVAPALMNDFISM 228

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            K+  L   +G  D V      +  T       ++   +++ +S+   L  +    ++  
Sbjct: 229 QKDVGLISVLGAVDAVRAAQIDVASTYN-FTPYVVASLLFILMSVPFILLNDWYTERLRK 287

Query: 395 KE 396
           +E
Sbjct: 288 RE 289


>gi|319793874|ref|YP_004155514.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315596337|gb|ADU37403.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 352

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 60/270 (22%), Positives = 106/270 (39%), Gaps = 15/270 (5%)

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           I  V +     +      +  +   L V+ +    +++  G+   +   +     +    
Sbjct: 90  IAVVVLSAVTVLSAWPRSWRWWLVPLWVVALVLFVLLMRGGVMGLSHVPTSRWGGLPLTI 149

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            + V    L          L R       + L   YI            LI++ +   F 
Sbjct: 150 GLAVVGLAL-AFPLALLLALGRRSGWPVVRTLSASYIELVRGVP-----LISVLFMASFL 203

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+L    +          + +   L+ + AA++AEI+R GL AVPRGQ E A+ALG   
Sbjct: 204 LPLLWPAGW-----QPDVLVRVLAGLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGR 258

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQA 363
               R ++LPQA+R ++P LT+  +  LK++SL   VG  +L    G  +          
Sbjct: 259 WPVQRDIVLPQALRLVVPALTNSVVGTLKDTSLVTVVGLFELTGALGLALGGDPIWRPFY 318

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +E  L    +Y  L   ++ +   L  ++A
Sbjct: 319 LEGYLFIAAVYWVLCFGLSRYSVWLERRLA 348


>gi|167748155|ref|ZP_02420282.1| hypothetical protein ANACAC_02899 [Anaerostipes caccae DSM 14662]
 gi|167652147|gb|EDR96276.1| hypothetical protein ANACAC_02899 [Anaerostipes caccae DSM 14662]
          Length = 219

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 14/223 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                R +      M     I     VL +V+  F   + R++       +  +YI   L
Sbjct: 3   WLFIERNIPLYIEAMKLTLGIGALGVVLSVVIG-FLCSMVRYYRVPVLNRIVGIYIE--L 59

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
               P L+ +   Y                       F+   I L+   A++++E  R G
Sbjct: 60  SRNTPLLIQLFFLYY-----------GLPKIGIKLNAFVIAVIGLTFLGASYMSEAFRGG 108

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L AV + Q E+ +++GLT  +  R ++LPQA+   +P + +  + LLK +S+  A+  AD
Sbjct: 109 LEAVNKIQEESGLSIGLTKPQLMRYIILPQALAIAMPSVGANVIFLLKETSVFSAIALAD 168

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+ V   +I    +  E + + +  YL + + I++  + L  K
Sbjct: 169 LMFVAKDLIGMYYKTNEALFMLVVAYLIILLPISVIFSVLERK 211



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 37/92 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +   G++ + +IG L    R     ++  I  +Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLGIGALGVVLSVVIGFLCSMVRYYRVPVLNRIVGIYIELSRNTPLLIQLFFLYYGLPKI 79

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
               +  ++   G+                 A
Sbjct: 80  GIKLNAFVIAVIGLTFLGASYMSEAFRGGLEA 111


>gi|110679457|ref|YP_682464.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
 gi|109455573|gb|ABG31778.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 269

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 96/234 (41%), Gaps = 11/234 (4%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
               +      +F            +D     +    +LG+ L++   R +R       +
Sbjct: 41  PAVRASFFDASVFAETFPTLLQAFMIDVMIFAWSVPLILGLGLAIALARGARAPALFPLR 100

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
               +Y+  F    +     I   Y + F  P LG          +  ++   +AL    
Sbjct: 101 IFGAVYVDVFRGVPV-----ILTIYLIGFGIPGLGL-----PRPWNSPYIWGTVALVLTY 150

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           +A++AE++RSG+ +V   Q  AAI LGL+ R   R V+LPQA+R ++P   +  + L K+
Sbjct: 151 SAYVAEVLRSGIESVHASQRNAAICLGLSERDTMRYVVLPQAIRRVVPANMNMLVALQKD 210

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +L   +G  +++   G I           L+   I+L +++    + + L  +
Sbjct: 211 VALLSFIGPVEILRQAG-IYKSLLANFTPYLVAAVIFLMVTVPATRYADYLLNR 263


>gi|330819468|ref|YP_004348330.1| transport system membrane protein [Burkholderia gladioli BSR3]
 gi|327371463|gb|AEA62818.1| transport system membrane protein [Burkholderia gladioli BSR3]
          Length = 220

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 92/229 (40%), Gaps = 14/229 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +    L      +      ++ S  LG+ +  FA  L++    +  +A   +YI 
Sbjct: 3   NFDPAVITHNLPQIGGGLALTLGSWIASVALGLAIG-FAAALAQQLGGRGARAAIRVYIE 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F   G P LV + L Y                G T+ P   +   +LS Y  A+  E  
Sbjct: 62  LF--RGTPFLVQLFLLYYGGPAF----------GLTLDP-LPAGIASLSLYAGAYFTEAF 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG  A+P G +EAA  LGLT  +    + LPQ +  I+P LT+  + L K +++   V 
Sbjct: 109 RSGFAAIPAGHLEAAACLGLTRWQTIARIQLPQMLALILPALTNLTIVLSKETAVLSIVT 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +L  V   I + +   +E +L     YL L  +          ++  
Sbjct: 169 VPELTFVLTGIGSASFAFVETLLALSVCYLLLVELATWAGALAERRVGR 217


>gi|262282450|ref|ZP_06060218.1| amino acid permease [Streptococcus sp. 2_1_36FAA]
 gi|262261741|gb|EEY80439.1| amino acid permease [Streptococcus sp. 2_1_36FAA]
          Length = 225

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/221 (22%), Positives = 89/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S +LG  L +  T  S     K  + L   Y+    I      
Sbjct: 19  LQGLGVTIGISVISVLLSMILGTFLGIIMTSRS-----KIVRLLTRFYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G S       S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGES-------SAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT  +    V++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTKFQLYYYVIIPQVLRRLLPQAINLITRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y  +   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFLVCFPISKLAGHLEKH 222



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + I+GT +G    S +K+V  + R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISVISVLLSMILGTFLGIIMTSRSKIVRLLTRFYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|153011888|ref|YP_001373101.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563776|gb|ABS17272.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 222

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 91/229 (39%), Gaps = 13/229 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            F            +    ++ V++ ++G+V       LS +      + +   YI  F 
Sbjct: 6   FFFVLNAWPALLEGLKITLQLTVWANIIGLVAGFPLALLS-NARIAPIRWIARFYIDLF- 63

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
               P LV +   +              I     SP FM + I L     AF  E  R+ 
Sbjct: 64  -RCTPVLVQVVWFFFC---------IPMIFEVWWSPVFMGVLI-LGMNQTAFNGEAFRAA 112

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P  Q +A +ALGL     TR ++LPQA+R+  P L +  + + + SSL   VG AD
Sbjct: 113 IQSIPAAQRDAGVALGLGRWNYTRYIVLPQAIRTATPVLITNAIGIFQQSSLVALVGVAD 172

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           L+  G  +  QT + IE        YL ++I           ++    K
Sbjct: 173 LMYQGKQLSTQTYRPIETFTFLAAFYLVVAIPFGRLAAFFEHRLERMNK 221



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 2/156 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  L     I   + G  +     +    + WI R Y+++FR  P LV +
Sbjct: 13  WPALLEGLKITLQLTVWANIIGLVAGFPLALLSNARIAPIRWIARFYIDLFRCTPVLVQV 72

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
            + +  +  +  +    + +   +   N+              I       G+ L L   
Sbjct: 73  VWFFFCIPMIFEVWWSPVFMGVLILGMNQTAFNGEAFRAAIQSIPAAQRDAGVALGLGRW 132

Query: 206 RLSRH--FHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             +R+    +    A P+L  +   IF   +LV + 
Sbjct: 133 NYTRYIVLPQAIRTATPVLITNAIGIFQQSSLVALV 168


>gi|15675231|ref|NP_269405.1| putative amino acid ABC transporter permease [Streptococcus
           pyogenes M1 GAS]
 gi|71903621|ref|YP_280424.1| histidine transport system permease protein M [Streptococcus
           pyogenes MGAS6180]
 gi|71910797|ref|YP_282347.1| histidine transporter permease [Streptococcus pyogenes MGAS5005]
 gi|94990607|ref|YP_598707.1| histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS10270]
 gi|209559536|ref|YP_002286008.1| Amino acid ABC transporter, permease protein [Streptococcus
           pyogenes NZ131]
 gi|251782501|ref|YP_002996803.1| histidine transport system permease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|13622400|gb|AAK34126.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes M1 GAS]
 gi|71802716|gb|AAX72069.1| histidine transport system permease protein M [Streptococcus
           pyogenes MGAS6180]
 gi|71853579|gb|AAZ51602.1| histidine transport system permease protein [Streptococcus pyogenes
           MGAS5005]
 gi|94544115|gb|ABF34163.1| Histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS10270]
 gi|209540737|gb|ACI61313.1| Amino acid ABC transporter, permease protein [Streptococcus
           pyogenes NZ131]
 gi|242391130|dbj|BAH81589.1| histidine transport system permease protein [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323127387|gb|ADX24684.1| Amino acid ABC transporter, permease protein [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 213

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + + S  LG +L+            K  +    LY+  +++ G P L
Sbjct: 12  LDGALVTLQVFFIVIILSIPLGAILAFLM-----KIPFKPLQWFLTLYV--WMMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +   ++  + 
Sbjct: 174 AANRDA-TLAPMFIAGLIYLLLIGLVTIISKQVEKRF 209



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  +I +  +G ++        K + W   +YV + R  P L+ + F 
Sbjct: 11  LLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D          LN              A 
Sbjct: 71  YYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAI 110


>gi|257485080|ref|ZP_05639121.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289625714|ref|ZP_06458668.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289646323|ref|ZP_06477666.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|289672939|ref|ZP_06493829.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. syringae FF5]
 gi|330869651|gb|EGH04360.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330890405|gb|EGH23066.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330982502|gb|EGH80605.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|330987289|gb|EGH85392.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331010993|gb|EGH91049.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 225

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 41  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 88  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPF 147

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 148 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 207

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 208 WLVKRYEQH 216



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  +     +   ++  ++   RLS  + + W   VYVEV R I  LV+
Sbjct: 14  IARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|294815490|ref|ZP_06774133.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|326443841|ref|ZP_08218575.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|294328089|gb|EFG09732.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
          Length = 292

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 17/267 (6%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           V     +  +        +    L     S  +          L     T+       + 
Sbjct: 22  VGFLAVLAVVAWWVLGVMAERDQLASEKWSPFVTDAKVWTTFLLPGLGETLKAAGISMLI 81

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +  LG  L +   RLS H   +    +P+  +  F    +P L+L+   YQ         
Sbjct: 82  ALPLGAALGI--GRLSDHAWVR----IPVGAVVEF-FRAIPVLLLMVFAYQAFVQ----- 129

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F    +      ++   L  Y A+ IAEIVR+G++++P GQ +AA A+G+   +A  
Sbjct: 130 ---FTTIESDFRPMYAVITGLVLYNASVIAEIVRAGILSLPNGQTDAAKAIGMRKGQAMA 186

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIW 370
            VLLPQA+ +++P L SQ + ++K+++L    +GF++L+     I    G   I  + + 
Sbjct: 187 HVLLPQAVTAMLPALVSQLVVIVKDTALGGALLGFSELLYQNRAITANYGANTIAALTVI 246

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
             I++ ++  +  F + L  +I   +K
Sbjct: 247 ALIFILVNFALTSFASWLEGRIRRGKK 273



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 21/145 (14%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  NI   +    +L V+  W +                G ++ER   
Sbjct: 2   TSVLYDAPGPRAKRRNILYTVGFLAVLAVVAWWVL----------------GVMAERDQL 45

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
             ++     T    + T +L G   T   A   M+ A  +G  +G GRLS +  V     
Sbjct: 46  ASEKWSPFVTDAKVWTTFLLPGLGETLKAAGISMLIALPLGAALGIGRLSDHAWVRIPVG 105

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSV 155
             VE FR IP L+++ F Y++ +  
Sbjct: 106 AVVEFFRAIPVLLLMVFAYQAFVQF 130


>gi|66046194|ref|YP_236035.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256901|gb|AAY37997.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 225

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 41  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 88  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDALRALDFGPISAFRRIILPQALPF 147

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 148 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 207

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 208 WLVRRYEQH 216



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  +     +   ++  ++   RLS  + + W   VYVEV R I  LV+
Sbjct: 14  IARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|298290459|ref|YP_003692398.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926970|gb|ADH87779.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 224

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 87/224 (38%), Gaps = 14/224 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F               +    ++ +   VLG+ L + A   +R       +     
Sbjct: 1   MNYAFDYGWLFEYWPVLAKGLAVTVELTLVGGVLGVALGV-ACAWARALGPSWLRPFVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                 + + F  P L             E  +  +A+     A+  
Sbjct: 60  YVELIRNTPFL-----IQLFFIFFGLPAL--------GLRMGELEAANLAMVVNLGAYGC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +LG++  +    V+L  A++ I P L+SQ + ++  S+   
Sbjct: 107 EIIRAGIQATPKGQFEAGASLGMSRIQTFWHVVLVPALQRIWPALSSQIVIVMLGSAAVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            +   DL      I ++T +A E   +   IYL+L+I +   + 
Sbjct: 167 QIATEDLTFAANFIQSRTFRAFEAYFVSTLIYLALAIALRQLLR 210



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G   T  L   G +    +G      R      +      YVE+ RN P L+ 
Sbjct: 13  YWPVLAKGLAVTVELTLVGGVLGVALGVACAWARALGPSWLRPFVAAYVELIRNTPFLIQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +FF++  + ++             M +N
Sbjct: 73  LFFIFFGLPALGLRMGELEAANLAMVVN 100


>gi|66043567|ref|YP_233408.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254274|gb|AAY35370.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
 gi|330971845|gb|EGH71911.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 221

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 101/231 (43%), Gaps = 14/231 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + L           ++     +LG+ L +    + R +  +    +  +Y+  
Sbjct: 5   FDFTPVLQNLDVLLRGALFTLELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE- 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI   P LV +   +           F          E+ +  +A+     A+  EIVR
Sbjct: 63  -LIRNTPFLVQLFFIF-----------FGLPSLGVQITEWQAAVLAMVINLGAYSTEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL ++  +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMSRYEAFRHVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L      I ++  ++ E  ++   IYL+++++I   +  +  +   + +
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLIRQLLAWIGRRYISRNR 221



 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQNLDVLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAI 116


>gi|317049371|ref|YP_004117019.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316950988|gb|ADU70463.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 216

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 + +  LY+S  L+ G P +V + + +           F            ++  
Sbjct: 45  RRAWIWRFIGRLYVS--LMRGTPAIVQLFVVF-----------FTLPRLGLGGQPMLAAV 91

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +A+   + A++AEI+R     V RGQ+EAA  LGL+       V+ PQ MR+ +P L ++
Sbjct: 92  VAIGLNSGAYVAEILRVNRSLVTRGQLEAARTLGLSRALTWWYVINPQVMRASLPMLVNE 151

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +  LLK + LA  V   +L   G  +I +T  A +++L+    YL +++ +     RL A
Sbjct: 152 FTILLKTTPLASVVALTELTYAGQIVIARTYDATQVLLLVAAGYLVIALPLISAARRLEA 211

Query: 391 K 391
           K
Sbjct: 212 K 212


>gi|254360616|ref|ZP_04976765.1| possible arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261493367|ref|ZP_05989893.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261496633|ref|ZP_05993013.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|153091156|gb|EDN73161.1| possible arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica PHL213]
 gi|261307836|gb|EEY09159.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261311011|gb|EEY12188.1| putative arginine ABC superfamily ATP binding cassette transporter,
           membrane protein [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 227

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +  K L   +I+ F   G P L+   L Y        + +        +S  +    +A
Sbjct: 42  NRPLKWLVNGFITLFT--GTPLLIQFFLIYSGPGQFEWITE--SAAWVLLSDAWFCAMLA 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+  +AA+   +    + A+P+GQ E   ALGL+       +L+P A++  +P  +++ +
Sbjct: 98  LALNSAAYSTLLFHGAVKAIPKGQWETCAALGLSRLDTL-KILVPYALKRALPSYSNEIV 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + K +SLA  +   D++     +      A+ I  +   IYL ++ ++ + + +L +++
Sbjct: 157 LVFKGTSLASTITIMDIMGYARQLYGTEYDALSIYGMAGVIYLVITGIMTIVLRKLESRV 216

Query: 393 ALKEK 397
              E+
Sbjct: 217 LAFER 221


>gi|320008164|gb|ADW03014.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 228

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 21/242 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEK 214
            +  + F        L    +T+       + S + G +L+          R     +  
Sbjct: 2   EAREIVFDFLEGYDLLGAFWVTVKLTVYSALGSLIWGTLLAGMRVGPVPLMRGFGTAYVN 61

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + +PL  I  F   GL   + + L                 GG      F    + LS
Sbjct: 62  VIRNIPLTVIIVFASLGLFQTLQVQLG---------------GGGDFEVINFRLAVLGLS 106

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            YTAAF+ E +RSG+  VP GQ EAA ALGL+  +  RL++LPQA R+++ PL +  + L
Sbjct: 107 LYTAAFVCEALRSGINTVPAGQAEAARALGLSFTQVLRLIILPQAFRAVVNPLANVLIAL 166

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            KN+++A A+G  +   +   +I    Q I I  ++ F ++ L++   L +  ++ K+A+
Sbjct: 167 TKNTTVAAAIGVVEAAYLMKDMIEAEAQLILISAVFAFGFICLTLPTGLLLGWVSKKVAV 226

Query: 395 KE 396
           K 
Sbjct: 227 KR 228



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 28/67 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     + + I GTL+   R+    L+      YV V RNIP  V+I F 
Sbjct: 16  LLGAFWVTVKLTVYSALGSLIWGTLLAGMRVGPVPLMRGFGTAYVNVIRNIPLTVIIVFA 75

Query: 149 YKSVLSV 155
              +   
Sbjct: 76  SLGLFQT 82


>gi|19746201|ref|NP_607337.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS8232]
 gi|94994530|ref|YP_602628.1| Histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS10750]
 gi|139473660|ref|YP_001128376.1| putative amino acid ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
 gi|306827253|ref|ZP_07460540.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
 gi|19748383|gb|AAL97836.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS8232]
 gi|94548038|gb|ABF38084.1| Histidine transport system permease protein hisM [Streptococcus
           pyogenes MGAS10750]
 gi|134271907|emb|CAM30145.1| putative amino acid ABC transporter permease protein [Streptococcus
           pyogenes str. Manfredo]
 gi|304430400|gb|EFM33422.1| polar amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pyogenes ATCC 10782]
          Length = 213

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + + S  LG +L+            K  +    LY+  +++ G P L
Sbjct: 12  LDGALVTLQVFFIVIILSIPLGAILAFLM-----KVPFKPLQWFLTLYV--WMMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +   ++  + 
Sbjct: 174 AANRDA-TLAPMFIAGLIYLLLIGLVTIISKQVEKRF 209



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  +I +  +G ++        K + W   +YV + R  P L+ + F 
Sbjct: 11  LLDGALVTLQVFFIVIILSIPLGAILAFLMKVPFKPLQWFLTLYVWMMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D          LN              A 
Sbjct: 71  YYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAI 110


>gi|304393286|ref|ZP_07375214.1| octopine transport system permease protein OccM [Ahrensia sp.
           R2A130]
 gi|303294293|gb|EFL88665.1| octopine transport system permease protein OccM [Ahrensia sp.
           R2A130]
          Length = 232

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 99/231 (42%), Gaps = 5/231 (2%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            +            +    ++   +   G +L++    L +    +   A+   Y +  +
Sbjct: 4   WYWLPDYGWRFVEGIWVTLELLGIALFFGFLLAIPIG-LVQVTGPRWLGAIARGYCT--M 60

Query: 229 IFGLPTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G P L+ +  L Y L    P   +  N      +   F     A     AA+   I+R
Sbjct: 61  IRGTPLLIQLWLLYYGLGSLFPYFPELRNSFIWPILREAFPYAAFAFILSVAAYEGHIMR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
               +VP+G++EAA A+G+      R + LP+A+++++P L  + +  LK+  LA  +  
Sbjct: 121 GAFASVPKGELEAARAMGMGRFTVLRRIWLPRAIQNVLPTLAGEAVLTLKSVPLASTITI 180

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            D+  VGG +  +T +  E ++   FIYL ++ ++ +    L  ++    +
Sbjct: 181 FDVFGVGGIVRQETYRIYEPLIFVGFIYLLITAVLVVLFRWLENRVPSANR 231



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   T  L    +    ++   +G  +++  + +  I R Y  + R  P L+ 
Sbjct: 10  YGWRFVEGIWVTLELLGIALFFGFLLAIPIGLVQVTGPRWLGAIARGYCTMIRGTPLLIQ 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           ++ LY  + S+ P         F    N+             A  F+ S  
Sbjct: 70  LWLLYYGLGSLFP--------YFPELRNSFIWPILREAFPYAAFAFILSVA 112


>gi|187926113|ref|YP_001892458.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|241665601|ref|YP_002983960.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|187727867|gb|ACD29031.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|240867628|gb|ACS65288.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 230

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 4/189 (2%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           L         +  PLL    F  FG   L+    +   + +    +G +     S    E
Sbjct: 33  LPARALVAFLRKTPLLVQLFFWYFGAAQLLGEDVVGAIIGWGGIAVGAWRLPAPSF---E 89

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F++    ++ Y  AF +E +R+G+ AVPRGQ EAA++LG T R A   V+LPQA+R    
Sbjct: 90  FLAAAFGIALYAGAFFSEELRAGIRAVPRGQREAALSLGFTPRAAFLRVVLPQALRVSAL 149

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           PL  Q  N +KN+SLA+ +G A+L      +   T  A +   +   +Y  + +++    
Sbjct: 150 PLLGQCANTIKNTSLAMGIGLAELAYSARQVETDTLLAFQAFAVATVLYAGVILLLQWVA 209

Query: 386 NRLNAKIAL 394
            R+  ++  
Sbjct: 210 PRVLRRLGW 218


>gi|58698603|ref|ZP_00373500.1| amino acid ABC transporter, permease protein SP1502 [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630094|ref|YP_002726885.1| amino acid ABC transporter, permease [Wolbachia sp. wRi]
 gi|58534873|gb|EAL58975.1| amino acid ABC transporter, permease protein SP1502 [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225592075|gb|ACN95094.1| amino acid ABC transporter, permease [Wolbachia sp. wRi]
          Length = 215

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 10/173 (5%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +PL+     +I G P ++ +++ Y   F  P +              F +  IA    + 
Sbjct: 46  IPLINGIISVIRGTPLILQLSVVY---FMTPTIAGIKL-------NIFSAGIIAFGLNSC 95

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI+R+G+  + + Q EAA  L +      R ++LPQ +++I+P + ++ + LLK +
Sbjct: 96  AYIAEILRAGIETISKNQFEAAKTLQIPSFYMWRDIILPQVIKNILPAMINEIIALLKET 155

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   +G  D++     +  +       + +    Y +L ++I     ++  K
Sbjct: 156 ALISTIGGVDIMRSAQMLAAEQFTYFIPLCLAGAYYYALVLLIEYIGKKIEQK 208


>gi|70728644|ref|YP_258394.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68342943|gb|AAY90549.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 236

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 88/230 (38%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ +   ++   +TM   +      F++ I LS+      R+           
Sbjct: 6   QEYWRPFLYSDGYHVTGLAMTMWLLSASICIGFLVSIPLSIARVSPKRYIRWPV------ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    +     +  +          +A +  T A+ 
Sbjct: 60  -QFYTYLFRGTPLYIQLLICYTGIYSIAAIRAQPVL-DAFFRDAMNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    + ++  G++EAA A GL+  K    V++P A+R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRSMAHGEVEAAKAYGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ +     + T    +   I   IYL ++  +         +
Sbjct: 178 FTATIPDILKIARDANSATFLTFQSFGIAAIIYLCVTFALVGLFRLAERR 227



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 3/124 (2%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + +   P+     Y    + G   T WL  + +    ++   +   R+S  + + W  + 
Sbjct: 5   LQEYWRPFLYSDGY---HVTGLAMTMWLLSASICIGFLVSIPLSIARVSPKRYIRWPVQF 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  +FR  P  + +   Y  + S+  I    ++  F     N  +    L          
Sbjct: 62  YTYLFRGTPLYIQLLICYTGIYSIAAIRAQPVLDAFFRDAMNCTILAFALNTCAYTTEIF 121

Query: 192 FSFV 195
              +
Sbjct: 122 AGAI 125


>gi|221197900|ref|ZP_03570946.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
 gi|221204542|ref|ZP_03577559.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221175399|gb|EEE07829.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2]
 gi|221181832|gb|EEE14233.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans CGD2M]
          Length = 251

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 8/224 (3%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------ 211
            P   I+L               LT+   A   + + V G++L++     +         
Sbjct: 6   RPHRRIMLGLAPKYLFWLWHGFLLTLGLAAASALAATVGGLLLAVARHARASGLRALAAG 65

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
           +    +  PLL    F  FG+ +L+       L+    +      +  +  S EF++ ++
Sbjct: 66  YVVAFRNTPLLVQLLFWYFGVASLLPDTWTAWLNARHEL--GMGPLTLAWPSFEFVAGWV 123

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  QY
Sbjct: 124 GLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIALPPLFGQY 183

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +NL+KNSSLA+A+G A+L      +  +T +      +   +Y+
Sbjct: 184 MNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAFGVATVLYV 227



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 60/159 (37%), Gaps = 4/159 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  LA +  + AT+ G L+   R +    +  +   YV  FRN P LV 
Sbjct: 19  YLFWLWHGFLLTLGLAAASALAATVGGLLLAVARHARASGLRALAAGYVVAFRNTPLLVQ 78

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--- 201
           + F Y  V S+LP    +  L     L    L+    + +  A     S      ++   
Sbjct: 79  LLFWYFGVASLLPDTWTAW-LNARHELGMGPLTLAWPSFEFVAGWVGLSAYTAAFVAEEC 137

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               R  R        AL L  + +     LP  V IAL
Sbjct: 138 EAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 176


>gi|330820725|ref|YP_004349587.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327372720|gb|AEA64075.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 239

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-----YISTFLIFGLPTLVLIALKYQLH 245
           +    L +VL++ +   S       G AL +           +I     + ++ L +  +
Sbjct: 24  LGGAALTLVLAVASAIASGLLGFAAGIALAMAGRAARVPLLVVIGFFRAIPVLMLIFWTY 83

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L   +        P   ++  ALS    A++A  V +G++AV   Q +A ++LGL
Sbjct: 84  FLLPILFHVDV-------PGLAAVVCALSLIGGAYLAHSVHAGIVAVGDAQWQAGLSLGL 136

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +  R V+LPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+     I
Sbjct: 137 TRWQTLREVVLPQAVRIMAPSFVNQWVSLVKDTSLAYIVGVNELSFVATQVNNRLMVYPI 196

Query: 365 EIILIWMFIYLSLSIMIALF-MNRLNAK 391
            + L   F+YL L   +    M+    +
Sbjct: 197 PVFLFVAFLYLVLCTALDRVAMSWFARR 224


>gi|319779071|ref|YP_004129984.1| Histidine ABC transporter, permease protein HisQ [Taylorella
           equigenitalis MCE9]
 gi|317109095|gb|ADU91841.1| Histidine ABC transporter, permease protein HisQ [Taylorella
           equigenitalis MCE9]
          Length = 234

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 85/221 (38%), Gaps = 3/221 (1%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           ++ + S +L +V+  F   L R    +    +   Y +   + G+P 
Sbjct: 10  YLPRVLEGALVTLEVALLSVILAVVIG-FIGALFRLSKNRIISFIGTFYSTF--VRGVPD 66

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V + + +             F         F +  + LS    AF  E  R  ++A+P+
Sbjct: 67  IVWMLMIFYSIQIGLNQVTEYFDWDYIEISPFFAGVLTLSFIYGAFFTETFRGAILAIPK 126

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           G +EA  A G++  + +  ++ P  MR  IP + + +L L K ++L   +G  D+  +  
Sbjct: 127 GSIEAGEAYGMSKMQVSSRIIFPLMMRFAIPGMKNNWLVLNKATALVSLIGLEDMTLIAH 186

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              + T  +    L+   I+L  S +       L    +  
Sbjct: 187 NAGSATHLSFAFNLLSALIFLIASWLSLSLFKYLEVHYSRG 227



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 3/118 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T  +A   +I A +IG +    RLS N+++++I   Y    R +P +V 
Sbjct: 10  YLPRVLEGALVTLEVALLSVILAVVIGFIGALFRLSKNRIISFIGTFYSTFVRGVPDIVW 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +  ++    S+    +         ++         LT+      F      G +L++
Sbjct: 70  MLMIFY---SIQIGLNQVTEYFDWDYIEISPFFAGVLTLSFIYGAFFTETFRGAILAI 124


>gi|225858525|ref|YP_002740035.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|225721060|gb|ACO16914.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
          Length = 225

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 92/221 (41%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++ +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIEISILSVLLSMMFGTVMGIIM-----TSHSRIIRFLTRLYLDFTRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + + AA + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGAAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL + +G  ++  VG  
Sbjct: 122 QFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVILIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCYPISKLSTHLEKH 222



 Score = 43.4 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + + GT++G    S ++++ ++ R+Y++  R +P LV++F +
Sbjct: 18  ILQGLGVTIEISILSVLLSMMFGTVMGIIMTSHSRIIRFLTRLYLDFTRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|91778559|ref|YP_553767.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691219|gb|ABE34417.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 246

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 8/231 (3%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEK 214
           H +                 +T+  +A + V + +LG  L++      R        +  
Sbjct: 2   HLVNFWLDPRYLGWLAHGFLITLVLSACVSVCATLLGFGLAMAQIAQQRSVAAAARLYVL 61

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             +  PLL    F  FG  TL+     +    + P +           S E  + ++ L+
Sbjct: 62  VFRNSPLLVQLLFWYFGAATLLP--QPWMTWLNTPHVLGAAPFALHWPSFELFAGWLGLT 119

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           CY+ AFIAE  R+G+  V   Q +A  ALG+T     R V+LPQA+R   PPL  QY+N+
Sbjct: 120 CYSTAFIAEEFRAGIRGVGIAQYQAGAALGMTRYTTLRHVILPQAVRIATPPLAGQYMNI 179

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           +KNSSL +A+G A+L  +   +  ++ +  +       +Y+    +I +  
Sbjct: 180 VKNSSLTMAIGVAELSYMSRQVDTESFRTFQAFGTATVLYIGTIALIEIAQ 230



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +V +  D  Y   +  GF+ T  L+    + AT++G  +   +++  + VA   R+YV 
Sbjct: 2   HLVNFWLDPRYLGWLAHGFLITLVLSACVSVCATLLGFGLAMAQIAQQRSVAAAARLYVL 61

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           VFRN P LV + F Y    ++LP P  +       +LN   +              +F+ 
Sbjct: 62  VFRNSPLLVQLLFWYFGAATLLPQPWMT-------WLNTPHVLGAAPFALHWPSFELFAG 114

Query: 195 VLGI 198
            LG+
Sbjct: 115 WLGL 118


>gi|81176505|gb|ABB59527.1| OccQ [Agrobacterium tumefaciens]
          Length = 269

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 88/246 (35%), Gaps = 3/246 (1%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             + ++                G   +  G      T  T A  F   F +G+V      
Sbjct: 18  TGIRRAAKRSRAGNAMDYSQLMGFGPDGWGYDMLRATAMTMAVAF-SGFTIGLVFGCLGA 76

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             S        +A    Y +T L      LV+    +        +       G   +  
Sbjct: 77  AAS-LSSSGALQAAASGY-TTALRGIPDLLVIYLFYFGSSSVISNVASLFGSSGFVGAST 134

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F+   +A+   + A+  +++R  ++A+ +G++EA  A G+      R ++LPQA R  +P
Sbjct: 135 FLIGALAIGVVSGAYQTQVLRGAVLALNKGEIEAGRAYGMGALLLFRRIVLPQAARYALP 194

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + + +  +LK S+L   +G  +L+         T Q     L    +YL ++ +     
Sbjct: 195 GVGNVWQLVLKESALISVIGLVELMRQAQVGSGSTRQPFSFYLTAAALYLLITFVSGQVF 254

Query: 386 NRLNAK 391
                +
Sbjct: 255 RLAETR 260


>gi|254248929|ref|ZP_04942249.1| ABC-type arginine/histidine transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124875430|gb|EAY65420.1| ABC-type arginine/histidine transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 236

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 84/205 (40%), Gaps = 5/205 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V S  LG  L++    ++R    +       LY  T++  G P  V + + Y   +
Sbjct: 27  LWLLVVSIALGFALAVPL-AIARASSNRWISGPVWLY--TYVFRGTPLYVQLLMCYTGIY 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+     +  +          +A      A+  EI    + A   G++EA +A G++
Sbjct: 84  SLQVVHDHVLL-DTFFRNAMNCTLLAFVLNECAYATEIFAGAIKATSAGEVEAGMAYGMS 142

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             K    ++LP A+R  +P  +++ + +L  ++LA      D++ V   + + T  + + 
Sbjct: 143 RFKLHTRIILPSALRRSLPSYSNEVILMLHATTLAFTATVPDILKVTRDVNSATYMSFQA 202

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             I   +Y ++   +     +L  +
Sbjct: 203 YGIAAVLY-AVVFALIWAFRKLETR 226



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 64/213 (30%), Gaps = 7/213 (3%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           + Q    Y     Y      G   T WL    +     +   +   R S+N+ ++    +
Sbjct: 5   VGQYWQSYLYSDGYR---FSGLAITLWLLVVSIALGFALAVPLAIARASSNRWISGPVWL 61

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           Y  VFR  P  V +   Y  + S+  + DH ++  F     N  L    L     A    
Sbjct: 62  YTYVFRGTPLYVQLLMCYTGIYSLQVVHDHVLLDTFFRNAMNCTLLAFVLNECAYATEIF 121

Query: 192 FSFV----LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +     G V +  A  +SR            L  S         L+L A        
Sbjct: 122 AGAIKATSAGEVEAGMAYGMSRFKLHTRIILPSALRRSLPSYSNEVILMLHATTLAFTAT 181

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            P + +      S     F +  IA   Y   F
Sbjct: 182 VPDILKVTRDVNSATYMSFQAYGIAAVLYAVVF 214


>gi|300693528|ref|YP_003749501.1| amino acid ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
 gi|299075565|emb|CBJ34858.1| Amino acid ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
          Length = 227

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 11/210 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            N  I + +  LG V  L    L      +  + L   Y+          LV     Y +
Sbjct: 22  INIGISLLAVGLGTVAGLAVGTL-HLSPLRPVRRLARWYVIALRNVPWLVLV-----YGM 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P   +    G     P+++ + +AL+   +A +AEI R  ++++P  Q EAA +L 
Sbjct: 76  SYAVPF--EIVLRGHVLPFPDWLKVTLALALPASAHVAEIFRGAVLSIPSTQWEAAASLA 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTG 361
              R+    ++LPQ +R ++P   + Y  +   ++LA  VG  DL+         +N+T 
Sbjct: 134 FGRREILWRIVLPQCVRRMLPSWMNLYAVITMGTALASLVGVHDLLDTAQIASNTVNRTP 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +      + ++      IA    RL  +
Sbjct: 194 FTVVTYFTVLGLFFLYCYPIARLTRRLEHR 223



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 40/85 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A A+L G      ++   +   T+ G  VG   LS  + V  + R YV   RN+P LV+
Sbjct: 12  WAPALLRGLSINIGISLLAVGLGTVAGLAVGTLHLSPLRPVRRLARWYVIALRNVPWLVL 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++ +  +V   + +  H +  P  +
Sbjct: 72  VYGMSYAVPFEIVLRGHVLPFPDWL 96


>gi|323356726|ref|YP_004223122.1| amino acid ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323273097|dbj|BAJ73242.1| ABC-type amino acid transport system, permease component
           [Microbacterium testaceum StLB037]
          Length = 299

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 108/260 (41%), Gaps = 19/260 (7%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            +V+    +            +       + N              A        L +  
Sbjct: 26  LVVLAVVGFFVWRLADTGQFTAQKWSAFTYTNVWIEILKATGATLAAFAAAAVGALALGF 85

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L   RLS H   +        +  T +I     + ++   + L++  PV+         
Sbjct: 86  LLAIGRLSDHRWVR--------WPFTAVIEVFRAIPVLVFMFLLYYGFPVI--------G 129

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                + ++ IAL CY  + +AE++R+G+ ++PRGQ EA  A+GL      RLVLLPQA+
Sbjct: 130 IRMEPYWAVVIALVCYNGSVLAEVIRAGVESLPRGQAEAGYAIGLRKAGVMRLVLLPQAV 189

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSL 377
           R+++P + +Q +  LK+++L   + + +L+     I  Q       +   ++   IY++L
Sbjct: 190 RAMMPVIIAQLVVTLKDTALGFVITYPELLFYAKYIGAQPVVGSPIVPATIVVGIIYIAL 249

Query: 378 SIMIALFMNRLNAKIALKEK 397
            ++++   N +  ++    +
Sbjct: 250 CLILSFVANLVEKRLRRSPR 269


>gi|145297674|ref|YP_001140515.1| ABC-type glutamine/glutamate transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850446|gb|ABO88767.1| ABC-type glutamine/glutamate transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 220

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 13/205 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + + +   +  +    L++     T   L LL +   L   +P LV + L +   F
Sbjct: 24  LAISLLAILFATLGGVAYGVLAQQGGRLT---LGLLRVYLELFRVVPVLVWLYLFF---F 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+    +        P F    + L+ + A+ + E+VR GL ++ RGQ EA +ALGL+
Sbjct: 78  GLPIFFGLDI-------PAFWCAVLVLALWGASEVGEVVRGGLGSLARGQQEAGLALGLS 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R VLLPQA++ + PP  + Y  ++K SSLAV +G  +++ VG  II +T  ++ I
Sbjct: 131 TWQLYRHVLLPQALQRLTPPTINIYTRIIKTSSLAVLIGVVEVIKVGQQIIERTYASVLI 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
             +    +  +   ++L   RL  K
Sbjct: 191 YGLLFLFFFLVCYPLSLASRRLEQK 215



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           + +G   T  ++   ++ AT+ G   G       +L   + RVY+E+FR +P LV ++  
Sbjct: 16  LAIGAGQTLAISLLAILFATLGGVAYGVLAQQGGRLTLGLLRVYLELFRVVPVLVWLYLF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +     +   +      +           +       +       G+ L L   +L 
Sbjct: 76  FFGLPIFFGLDIPAFWCAVLVLALWGASEVGEVVRGGLGSLARGQQEAGLALGLSTWQLY 135

Query: 209 RHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALK 241
           RH            P + I T +I      VLI + 
Sbjct: 136 RHVLLPQALQRLTPPTINIYTRIIKTSSLAVLIGVV 171


>gi|291454549|ref|ZP_06593939.1| glutamate transporter permease [Streptomyces albus J1074]
 gi|291357498|gb|EFE84400.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 221

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 10/231 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F    +   L    +T+         S VLG VL+       R       +     Y++
Sbjct: 1   MFDFLQDYDLLGAFWVTVKLTLLSGAGSLVLGTVLAAM-----RVSPVPLMRGFATAYVN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L  +++               +    G       F    + LS YTAAF+ E V
Sbjct: 56  IVRNIPLTVIIVFT-----SLGLADTFRLTLGGEGVKEVAFRMAVLGLSTYTAAFVCESV 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP GQ EAA ALGL   +   L++LPQA R++I PL +  + L KN+++A A+G
Sbjct: 111 RSGINTVPVGQAEAARALGLNFTQVLTLIVLPQAFRTVIGPLANVLIALTKNTTVAAAIG 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   +   ++    Q + I  ++   ++ L++   L +  L  ++A+K 
Sbjct: 171 VGEASLLMKEMVENEAQLVLITAVFALGFVILTLPTGLLLGWLGKRLAVKR 221



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L       + ++GT++ A R+S   L+      YV + RNIP  V+I F 
Sbjct: 10  LLGAFWVTVKLTLLSGAGSLVLGTVLAAMRVSPVPLMRGFATAYVNIVRNIPLTVIIVFT 69

Query: 149 YKSVLSVLP 157
              +     
Sbjct: 70  SLGLADTFR 78


>gi|83592120|ref|YP_425872.1| amino acid ABC transporter permease [Rhodospirillum rubrum ATCC
           11170]
 gi|83575034|gb|ABC21585.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodospirillum rubrum ATCC 11170]
          Length = 367

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 18/262 (6%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            +P L     L   +L  L        +  G+ +         LT+         +F L 
Sbjct: 119 GLPRLWGRNLLVAWILVPLLAVLVMAGVFSGLRVGTDQWGGLPLTLLLTTVAMGGAFPLA 178

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +VL+L                     ++  +I G+  + LI + Y      P++     +
Sbjct: 179 VVLALARRSR----------FRLFRLMAVCVIEGVRGVPLITVLYGAILLVPLM-----L 223

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
              T   + +    A+  +TA+++AEI+R+GL A+P GQ EAA +LGL +    RLV+LP
Sbjct: 224 PAGTAIDKLLRAQGAILLFTASYLAEIIRAGLQAIPPGQYEAARSLGLGYGLTMRLVVLP 283

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA+R +IP + +  + +L++++L   +G  DL+S            G   E   +   +Y
Sbjct: 284 QALRLVIPSIVTLAIGILQDTTLVAVIGIHDLLSASKLAATDPDWLGFYTEGFCLVATLY 343

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
            +L    + +   L   +A  +
Sbjct: 344 FALCFAASRYSLWLERYLARGQ 365


>gi|14601702|ref|NP_148243.1| ABC transporter, permease protein [Aeropyrum pernix K1]
 gi|5105584|dbj|BAA80897.1| ABC transporter, permease protein [Aeropyrum pernix K1]
          Length = 220

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 103/211 (48%), Gaps = 14/211 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I + S  +G  +SL  T  +R    K  +     YI+ F   G P LV I + + 
Sbjct: 17  MYTLAITIISLSMGFTISLILTA-ARFLGFKPLRMAAEAYINFF--RGTPLLVQILMVF- 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F           F S  IA+   + A+ AEI+R  +  +P  QM  A +L
Sbjct: 73  ----------FGLPSLGVNLSAFYSAVIAIGLNSGAYQAEILRVAIKGIPEEQMLVARSL 122

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  + V++PQA+R+ IP LT++ + LLK SSLA  +G  +L  VG  +++ T +A
Sbjct: 123 GLSEIEIMKGVVIPQAVRNAIPGLTNETVILLKESSLASVIGVMELTRVGEYMVSATFRA 182

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +E  L+   IYL+LS++    + R    +A+
Sbjct: 183 LEAYLLIALIYLALSMIAFRMLKRAEKSLAI 213



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 32/88 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + IL G + T  +    +     I  ++ A R    K +      Y+  FR  P LV 
Sbjct: 8   YQSFILRGIMYTLAITIISLSMGFTISLILTAARFLGFKPLRMAAEAYINFFRGTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           I  ++  + S+             + LN
Sbjct: 68  ILMVFFGLPSLGVNLSAFYSAVIAIGLN 95


>gi|270292250|ref|ZP_06198464.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279296|gb|EFA25139.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 226

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF++G+++S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLVGLIVSVI-----RHYRVPIFSQLATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRLR 213



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     + + +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLVGLIVSVIRHYRVPIFSQLATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEA 111


>gi|262277478|ref|ZP_06055271.1| general L-amino acid transport system permease protein AapM [alpha
           proteobacterium HIMB114]
 gi|262224581|gb|EEY75040.1| general L-amino acid transport system permease protein AapM [alpha
           proteobacterium HIMB114]
          Length = 348

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 101/249 (40%), Gaps = 14/249 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
                L +       ++   G        +     +     I +F+ +    L +    +
Sbjct: 108 YLFLFLIIPFPILSLMLFSGGFLGLMPVETREWGGLFLTLVISIFAIIFCFPLGVLL-AM 166

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R  +    +   + +I  +    L T VL           P           T   + +
Sbjct: 167 GRRSNLPVVRYFSVGFIEFWRGVPLIT-VLFMAGVMFPLLLP---------AGTNMDKLV 216

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            + IA++ + AA++AE+VR GL AV RGQ +A+ A+G+ + K+   ++LPQA++ +IP +
Sbjct: 217 RVIIAITLFEAAYMAEVVRGGLQAVGRGQYDASKAIGMGYWKSHIFIILPQALKLVIPGI 276

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSV---GGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            + ++ L K++ L   VG  +++ +     T     G A E  +    +Y      ++ +
Sbjct: 277 ANTFIALFKDTPLVFVVGLLEILGMVNLAKTNPAWLGMATEGYVFVALVYWIFCFAMSRY 336

Query: 385 MNRLNAKIA 393
              +  K+ 
Sbjct: 337 SLSIEEKLK 345



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 32/74 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++   +I    +G L+  GR S   +V +    ++E +R +P + V+F     
Sbjct: 142 GLFLTLVISIFAIIFCFPLGVLLAMGRRSNLPVVRYFSVGFIEFWRGVPLITVLFMAGVM 201

Query: 152 VLSVLPIPDHSIVL 165
              +LP   +   L
Sbjct: 202 FPLLLPAGTNMDKL 215


>gi|146311433|ref|YP_001176507.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter sp. 638]
 gi|145318309|gb|ABP60456.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Enterobacter sp. 638]
          Length = 258

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 14/224 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L +   L  + + +      T   + +   V+   L++    L R    KTG+A+  
Sbjct: 1   MPALDWQGVLTGQPVQWLLSGFLTTLWVTLAGMVIASGLAILFLLL-RTAGGKTGRAVVS 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG-----------STVSPEFMSLY 270
           +++S F     P LV +   Y   ++       ++I G              +PEF+   
Sbjct: 60  VWVSLF--RNTPLLVQLLFWYFAAWNWLPFTLRDYINGEHTWSILPGDVWWFTPEFLCSA 117

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             L  +T+AF+ E + SGL AV RGQ +AA+A G +  +  R +LLPQ +     P+  Q
Sbjct: 118 WGLGVFTSAFLVEEIESGLQAVSRGQRQAALAQGFSSWQLFRFILLPQGLAHAWQPVVGQ 177

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           YLNL+K SSLA  +GFA+L      I +    A+E   +   +Y
Sbjct: 178 YLNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFTVGTVLY 221



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L GF+ T W+  +GM+ A+ +  L    R +  K    +  V+V +FRN P LV + 
Sbjct: 16  QWLLSGFLTTLWVTLAGMVIASGLAILFLLLRTAGGKTGRAVVSVWVSLFRNTPLLVQLL 75

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           F Y +  + LP      +     +    G  +        +   +  F    ++
Sbjct: 76  FWYFAAWNWLPFTLRDYINGEHTWSILPGDVWWFTPEFLCSAWGLGVFTSAFLV 129


>gi|325836760|ref|ZP_08166227.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|325491138|gb|EGC93427.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 225

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 53/212 (25%), Positives = 98/212 (46%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I + S ++ +VL L    L R    K  + +  LY++T  I  +P LVL+ L Y  
Sbjct: 24  VTLEISLISVMISVVLGLVMGMLMRV-KTKVVRLICRLYLNTVRI--VPQLVLLFLAY-- 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F        N  G        ++  +  S +  A + ++VR  L ++P+ Q E A+A+G
Sbjct: 79  -FGLSKSFGINLSGE-------VASILVFSFWGIAEMGDLVRGALDSIPKHQYETALAIG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+  + +++PQ +R ++P   +    ++K +SL V +G  ++V VG  II  +   +
Sbjct: 131 LNQRQIYQYIIIPQTIRRLLPQTINLVTRIIKTTSLIVLIGVVEVVKVGQQIIEASRLTV 190

Query: 365 E-----IILIWMFIYLSLSIMIALFMNRLNAK 391
                 I  +   +Y  +   I+L   +L   
Sbjct: 191 PTAALWIYGVIFLLYFLICYPISLAATKLEKH 222


>gi|254382235|ref|ZP_04997596.1| glutamate transport system permease gluC [Streptomyces sp. Mg1]
 gi|194341141|gb|EDX22107.1| glutamate transport system permease gluC [Streptomyces sp. Mg1]
          Length = 214

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++ +L +VL        R     + +    ++++      L  L    L     F
Sbjct: 19  VQLTVYASLLALVLGFLMASF-RVAPVGSFRVFGTVWVTVLRNTPLTLLFFAVLLGLPRF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +  Q                 +AL CYT+AFI E++RSG+  VP GQ EAA +LG++
Sbjct: 78  GLVLPFQVF-------------AVLALGCYTSAFICEVLRSGINTVPTGQGEAARSLGMS 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA RS+IPP+ S  + L KNS++A A    +L+    T+       +  
Sbjct: 125 FGQTLGSVVLPQAFRSVIPPIGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSIVWT 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+L  + L  +  +  
Sbjct: 185 FVWIAVGYLIITLSISLLFHVLEKRYGVAR 214



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A ++G L+ + R++          V+V V RN P  ++ F +   
Sbjct: 14  GFLGTVQLTVYASLLALVLGFLMASFRVAPVGSFRVFGTVWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|167581948|ref|ZP_02374822.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis TXDOH]
          Length = 241

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 2/235 (0%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                +      ++         +      A +  F+            R +        
Sbjct: 1   MNAWLAPKYLMWLWQGFLLTLGLSFAAAVAATLAGFALASARHARRAWLRRAAAASVVAF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    F  FG+ +L+   +   L+  +  +     +     S EF++ ++ LSCY
Sbjct: 61  RNTPLVVQLLFWYFGVASLLPEPVMAWLNTRRAAVVG--GVELHWPSFEFVAGWVGLSCY 118

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+AF+AE  ++GL  VP GQ  AA ALGL+ R+  R V+LPQA+R  +PPL  QY+NL+K
Sbjct: 119 TSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQYMNLIK 178

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           NSSL +A+G A+L      +  +T +      +   +Y++    +  F      +
Sbjct: 179 NSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYIAAIAAVEAFAQWTARR 233


>gi|254252391|ref|ZP_04945709.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124895000|gb|EAY68880.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 252

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 8/163 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  +   +I     + ++ L +  +F  P L   +        P   ++  AL+    A
Sbjct: 68  PLRVLLLAVIGFFRAIPVLMLIFWTYFLMPTLLHMDV-------PGLATVVCALALVGGA 120

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++S
Sbjct: 121 YLAHAVHAGIVAAGAGQRQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTS 180

Query: 340 LAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
           LA  VG  +L  V   + ++       I L    IYL L   +
Sbjct: 181 LAYIVGVPELSFVATQVNSRLMVYPAPIFLFVAAIYLVLCTSL 223


>gi|15902667|ref|NP_358217.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|116516015|ref|YP_816113.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|221231513|ref|YP_002510665.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854221|ref|YP_002735733.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|15458206|gb|AAK99427.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116076591|gb|ABJ54311.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|220673973|emb|CAR68483.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225723804|gb|ACO19657.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|332075993|gb|EGI86459.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 225

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 90/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIGISILSVLLSMMFGTVMGIIM-----TSHSRIIRFLTRLYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCYPISKLSTHLEKH 222



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + + GT++G    S ++++ ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMMFGTVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|222081148|ref|YP_002540511.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725827|gb|ACM28916.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 234

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 14/198 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               ++ V S +LG    +    L R    K  + L   Y+   +I   P LV + + Y 
Sbjct: 22  WLTIRLSVLSIILGSAFGIVLASL-RSVRGKWVRFLVDAYVE--VIRNTPFLVQLFIVY- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F   G         +  I ++   AA+  EI+R+G+ AV + Q+EA  AL
Sbjct: 78  ----------FGLPGIGLRVGADTAALIGMTINLAAYSTEIIRAGIEAVHKSQIEAGEAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G T  +  R V++  A+  + P L SQ++ ++  SS+  A+   +L +    + +QT ++
Sbjct: 128 GFTRFQIYRHVIIVPAVAKVYPALCSQFVLMMLASSICSAISTHELAASAAFVESQTYRS 187

Query: 364 IEIILIWMFIYLSLSIMI 381
            E+ ++   +YL+L++++
Sbjct: 188 FEVYIVVTLMYLALALVL 205



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 41/94 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +++ + Y    L G   T  L+   +I  +  G ++ + R    K V ++   YVEV RN
Sbjct: 7   FSALAQYQGEFLSGLWLTIRLSVLSIILGSAFGIVLASLRSVRGKWVRFLVDAYVEVIRN 66

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P LV +F +Y  +  +            GM +N
Sbjct: 67  TPFLVQLFIVYFGLPGIGLRVGADTAALIGMTIN 100


>gi|192291279|ref|YP_001991884.1| polar amino acid ABC transporter inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
 gi|192285028|gb|ACF01409.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodopseudomonas palustris TIE-1]
          Length = 362

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 18/263 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +P L     +    + +         LP G  +++       +T+      F  S  + +
Sbjct: 115 MPRLWGARLVVAWPVVIGLCLALMSGLPGGAVVSSNQWGGLPITLLVWVICFATSVPIAV 174

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +LSL     +R    +  + L + YI       +  + ++A+ Y      P+      + 
Sbjct: 175 LLSL-----ARRSRMRIVRWLAIGYIEL-----MRAIPMVAILYFATLILPM-----ALP 219

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           GS    +     + L+ +  A++AE+VR GL AVPRGQ EAA+ALGL + ++ RL++LPQ
Sbjct: 220 GSVPLDKLPRAIVMLALFWTAYVAEVVRGGLQAVPRGQEEAALALGLGYWRSMRLIVLPQ 279

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYL 375
           A+R+++P L +  +  L  +SL   +G  D++             G   E  L+   +Y 
Sbjct: 280 ALRAVVPGLVNLGIGFLLATSLLAVIGIMDIIGAAKAAAADPEWLGYYKEAFLVVALVYF 339

Query: 376 SLSIMIALFMNRLNAKIALKEKK 398
            +    + +   L  ++     +
Sbjct: 340 VMGYSGSRYSLWLERRLGTFSGR 362


>gi|302337441|ref|YP_003802647.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634626|gb|ADK80053.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 212

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 22/208 (10%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                S VLGI++ +              + +   YI                       
Sbjct: 24  ASVAISLVLGIIIGILGY-----LQIPIIRYIVSAYIIAMR----------------GLP 62

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
              L    F  GS VSP  ++  + LS Y  A+IAEIVR+G+ A+P+GQ E A ++GL+ 
Sbjct: 63  PLTLLLLVFFSGSFVSP-IVTAIVVLSVYHGAYIAEIVRAGISAIPKGQHEGADSIGLSV 121

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
                 V++PQ   SIIP L  QY+ L+K+++L  A+G  +L++    I+    + I + 
Sbjct: 122 IAKMVHVIMPQVWLSIIPSLVGQYIILIKDTTLISAIGVMELLNNARQIMQVVYRPITVY 181

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +I    +  +   +      L  +I  K
Sbjct: 182 VIVAVFFFVICFFLENLSKHLERRIKAK 209


>gi|282865053|ref|ZP_06274106.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces sp. ACTE]
 gi|282559976|gb|EFB65525.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces sp. ACTE]
          Length = 244

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 9/181 (4%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           K LP+  +S  ++       L    + L++  P L  +            +   +A    
Sbjct: 47  KLLPVRGVSRVVVEFFRGTSLYIQLFWLYYAMPQLTGYEL-------TPLLCGIVAFGLN 99

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+ AEIVR  + +VPR Q EAA+AL +T     R V++PQA   +IP  T+  + LLK
Sbjct: 100 YGAYGAEIVRGAIKSVPRAQYEAAVALNMTPFHRMRKVIMPQAWVQMIPSFTNLLIQLLK 159

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + L   +  ADL++    I ++TG+ +   L+ +  Y  L+  + L MN L    A K 
Sbjct: 160 ATPLLWLISAADLMTAVEHIRSRTGETLTAYLLLLAAYFVLAYALTLLMNLLER--AAKR 217

Query: 397 K 397
           +
Sbjct: 218 R 218


>gi|116686948|ref|YP_840195.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|116652663|gb|ABK13302.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 221

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 18/208 (8%)

Query: 194 FVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            +LG+ L+L A       R S        +  PLL     L +G   +V           
Sbjct: 1   MLLGVPLALAAGARHTPLRWSARGWLMLIRGTPLLVQLYLLYYGFGQIV----------- 49

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P     +      +   F    +ALS   +A++A I+R  +  VP G++EA  A G+T 
Sbjct: 50  -PREWMRDSWASPLLRDAFWYAIVALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTR 108

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +  R ++ P+A R  +P LT + + LLK++ LA  V   D++    T+  +T +  E +
Sbjct: 109 TQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVMGTANTLRFETLRVYEPL 168

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALK 395
                +Y+ L  ++ +   RL  +I   
Sbjct: 169 AGAAIVYVVLVALLTIPAARLEQRINRY 196


>gi|323698677|ref|ZP_08110589.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio sp. ND132]
 gi|323458609|gb|EGB14474.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfovibrio desulfuricans ND132]
          Length = 222

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 14/207 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F +               T   +      +GI   +    +SR +  K    +  +
Sbjct: 1   MSYQFSIEPIINNWDLFVGGALTTLLLTALGSAVGIGAGILG-AVSRAWKLKILHPVYTV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+    +   P LV +   Y + F  P L              + + ++A++    A+  
Sbjct: 60  YVE--CVRNTPFLVQL---YFIFFGLPAL--------GVKLSGWEASFLAMALNLGAYST 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++PRGQ+EAA +L L+  +  R V+L  A++++ P L SQ + ++  SS+  
Sbjct: 107 EIIRAGVQSIPRGQVEAAESLALSRWQTFRFVILRPALKNVWPALCSQIIIVMLGSSVCS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILI 369
            V   +L      I ++T +A EI   
Sbjct: 167 QVAAQELTYTANLIQSRTFRAFEIYAF 193


>gi|284032886|ref|YP_003382817.1| polar amino acid ABC transporter inner membrane subunit [Kribbella
           flavida DSM 17836]
 gi|283812179|gb|ADB34018.1| polar amino acid ABC transporter, inner membrane subunit [Kribbella
           flavida DSM 17836]
          Length = 293

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 96/237 (40%), Gaps = 13/237 (5%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
              + +    +  G            L +       V   VLG+ L++  T     F   
Sbjct: 59  WPRVRETFFNVDRGWEALPVVAQGLWLNIRVMLVCAVLIVVLGLTLAILRTLRGPIFF-- 116

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             +     Y   F    L       + + L F  P L        + +        +AL 
Sbjct: 117 PLRIFAAAYTDVFRGLPLL-----LVIFLLGFGVPALQLRGLPNQAVIW-----GGVALV 166

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              ++++AE+ R+G+ ++   Q  AA +LGL+HR+  R V+LPQA+R ++PPL + +++L
Sbjct: 167 LTYSSYVAEVFRAGIESIHPSQRAAARSLGLSHRQTLRFVVLPQAVRRVLPPLLNDFVSL 226

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            K+S L   +G  D +        +        ++   ++++L+I +    + +  +
Sbjct: 227 QKDSGLIAVLGVIDAIRAAQLETAEDFN-FTPYVVAGMLFVALTIPLTRLTDWVARR 282


>gi|184154979|ref|YP_001843319.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|260663374|ref|ZP_05864265.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|183226323|dbj|BAG26839.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum IFO 3956]
 gi|260552226|gb|EEX25278.1| glutamine ABC transporter permease component [Lactobacillus
           fermentum 28-3-CHN]
 gi|299782992|gb|ADJ40990.1| Glutamine ABC transporter permease component [Lactobacillus
           fermentum CECT 5716]
          Length = 215

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 98/210 (46%), Gaps = 19/210 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + S  LGI++SL  T   +           +L +  +L+ G P L+ +   + 
Sbjct: 22  QLFFWTLIGSLPLGIIVSLGLTSKIKPLKW-------VLEMYVWLMRGTPLLLQLIFVF- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++          V   + +  +A     AA+ AEI R GL ++ +GQ E A  L
Sbjct: 74  --YGLPII--------GIVFQRYDAALVAFILNYAAYFAEIFRGGLQSISQGQYEGARVL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
            L++ +  R +++PQ ++ +IP + ++ +NL+K+SSL   +G  DL+  G    ++    
Sbjct: 124 RLSYWQTVRKIVIPQVVKIVIPSIGNEVINLIKDSSLVYVIGLGDLLRAGNVATSRDVTL 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + ++L+ +   L +  +  + +  +  + +
Sbjct: 184 VPLLLVGLIY-LLMVGVCTVILRWVEKRYS 212



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 36/101 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  L F  +I +  +G +V  G  S  K + W+  +YV + R  P L+ + F+
Sbjct: 13  LFQGAGLTLQLFFWTLIGSLPLGIIVSLGLTSKIKPLKWVLEMYVWLMRGTPLLLQLIFV 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +  +  +  +            LN              +  
Sbjct: 73  FYGLPIIGIVFQRYDAALVAFILNYAAYFAEIFRGGLQSIS 113


>gi|182435531|ref|YP_001823250.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178464047|dbj|BAG18567.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 215

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 17/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   V +  LG++++ F     R       +     +++      L              
Sbjct: 23  AVSSVIALFLGVIIAGF-----RVSPVPPLRYFGTAWVTLMRNTPLTL--------LFLI 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+ +  F G       F+   +AL  YT++F+ E VRSG+  VP GQ EAA ++G+T
Sbjct: 70  FFFVVPEILFPG----MSPFVLGSLALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMT 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  ++V+LPQA R++IPPL+S ++ L KNS++A A   A+L      + ++    + +
Sbjct: 126 FAQTLQIVVLPQATRTVIPPLSSIFIALTKNSAIAGAFSVAELFGWQKLMSDKGYDIVPV 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL ++  I+     L  ++ +  
Sbjct: 186 FIWVAIGYLVVTFTISGLFRLLERRMEVAR 215



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 30/74 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  +     + A  +G ++   R+S    + +    +V + RN P  ++    +  
Sbjct: 14  GFIGTVSITAVSSVIALFLGVIIAGFRVSPVPPLRYFGTAWVTLMRNTPLTLLFLIFFFV 73

Query: 152 VLSVLPIPDHSIVL 165
           V  +L       VL
Sbjct: 74  VPEILFPGMSPFVL 87


>gi|86357910|ref|YP_469802.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86282012|gb|ABC91075.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 222

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 14/211 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                    + V   +L + + +     +R    K  ++  + ++   ++   P LV I 
Sbjct: 18  FWGSLGTLGLAVAGMILALAIGILGVA-ARTSKNKLVQSPVIAFVE--IVRNTPFLVQIF 74

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             Y   F  P++       G  ++P   +  IAL     A+  EI+R G+ +V +GQ+EA
Sbjct: 75  FIY---FALPLM-------GIRLNPT-ATAIIALGINGGAYAIEIIRGGVESVNKGQVEA 123

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             ALGL      RL++L  A+R+I P LTSQ++ L   +S+  ++   +L S    I + 
Sbjct: 124 GFALGLHKADVFRLIVLKPALRAIYPSLTSQFVMLTLTTSVCTSIAAYELTSAAQRIESD 183

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           T ++ E+      IYL +S ++      ++ 
Sbjct: 184 TFRSFEVYFSVTAIYLVISSLMMGIFALISR 214



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 43/84 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  LA +GMI A  IG L  A R S NKLV      +VE+ RN P LV IFF+
Sbjct: 17  LFWGSLGTLGLAVAGMILALAIGILGVAARTSKNKLVQSPVIAFVEIVRNTPFLVQIFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y ++  +    + +      + +N
Sbjct: 77  YFALPLMGIRLNPTATAIIALGIN 100


>gi|76808662|ref|YP_333448.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 1710b]
 gi|167845798|ref|ZP_02471306.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei B7210]
 gi|254260946|ref|ZP_04952000.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
 gi|254297703|ref|ZP_04965156.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|76578115|gb|ABA47590.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 1710b]
 gi|157808031|gb|EDO85201.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 406e]
 gi|254219635|gb|EET09019.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1710a]
          Length = 241

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 4/218 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKTG 216
            D  +   + M+L    L    L++       +  F L I       + R +   +    
Sbjct: 1   MDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS Y
Sbjct: 61  RNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLAQRWPSFEFVAGWLGLSGY 118

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+K
Sbjct: 119 TSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLIK 178

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           NSSL +A+G A+L      +  +T +      +   +Y
Sbjct: 179 NSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLY 216



 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 9   YLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 69  LLFWYFGVAALLPEPAMAW 87


>gi|270292249|ref|ZP_06198463.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279295|gb|EFA25138.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 225

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +         H +  + L   Y+    I      
Sbjct: 19  LQGLGVTIGISILSVILSMIFGTVMGIIM-----TTHSRVIRFLTRFYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNFQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCFPISKLSTHLEKH 222



 Score = 43.8 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 37/68 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   +I + I GT++G    + ++++ ++ R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVILSMIFGTVMGIIMTTHSRVIRFLTRFYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|307704543|ref|ZP_07641450.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           SK597]
 gi|307621908|gb|EFO00938.1| amino acid ABC transporter, permease protein [Streptococcus mitis
           SK597]
          Length = 226

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALTMLVVAYLMMLLPISLVFSWIERRLR 213



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 44/111 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEA 111


>gi|161831065|ref|YP_001596414.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA
           331]
 gi|161762932|gb|ABX78574.1| amino acid ABC transporter, permease protein [Coxiella burnetii RSA
           331]
          Length = 223

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 49/169 (28%), Positives = 89/169 (52%), Gaps = 2/169 (1%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +  F+I G P LV I + Y        L +   I  S +   F    IAL+  T+A+   
Sbjct: 52  VFVFIIRGTPLLVQIFIIYYGSGQFHWLRE--TILWSVLKRPFGCAIIALAINTSAYTTV 109

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           ++R  + ++P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA  
Sbjct: 110 LLRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAGT 169

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+
Sbjct: 170 ITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKL 218


>gi|293570941|ref|ZP_06681986.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E980]
 gi|291609004|gb|EFF38281.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E980]
          Length = 219

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTF 227
           M+      S    ++    +  V++  +G V   L                LPL     F
Sbjct: 1   MYFPLIDFSLMWTSLPFVLQGLVYTLGIGFVSFVLGNLVGLLLTVLGLLDWLPLNVFIRF 60

Query: 228 L---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G+P LVL+ L Y               G         +  I  +  ++AFI EI
Sbjct: 61  YLSFFRGIPALVLLFLLY--------------FGLPYQLSALTASVICFTITSSAFIGEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  ++L+K +SLA  +
Sbjct: 107 YRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++      I  +T     + ++   IY  + I I      L  +
Sbjct: 167 TVPEIFQKAKIIGGRTFDYFSLYILVALIYWVICIGIEKVQQYLEKR 213


>gi|148239751|ref|YP_001225138.1| ABC-type amino acid transport system permease component
           [Synechococcus sp. WH 7803]
 gi|147848290|emb|CAK23841.1| ABC-type amino acid transport system permease component
           [Synechococcus sp. WH 7803]
          Length = 328

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 14/242 (5%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
             S L +    + L  G  + +   S     +     + VFS V+ + L +    L R  
Sbjct: 86  SWSWLLMMPLGLWLLAGGGVLDPVPSRLWGGLVLTLLLTVFSGVIALPLGVLL-ALGRCS 144

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
              T + L  +YI      G+  + LIA+ +      P+     F+         +   +
Sbjct: 145 ELTTARQLSKIYID-----GMRAVPLIAVLFFGQLLLPL-----FLPVQIEINRLLRAVV 194

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           A   + AA++AE VR GL AVP  Q EAA ALGL   +  RLV+LPQA+R  +P LT+Q 
Sbjct: 195 AFGLFAAAYVAEDVRGGLQAVPPTQSEAAAALGLGPWQIQRLVILPQALRIAVPALTNQA 254

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + LL+N+SL   +G  +L+ +  +++      G+ +E+ +    +Y  L   +AL   + 
Sbjct: 255 VGLLQNTSLMAILGLVELLGISQSLLANPAYIGRHLEVYVWLAALYWLLCTAMALMARQF 314

Query: 389 NA 390
             
Sbjct: 315 ER 316


>gi|228477639|ref|ZP_04062268.1| ABC-type amino acid transport permease component [Streptococcus
           salivarius SK126]
 gi|228250528|gb|EEK09739.1| ABC-type amino acid transport permease component [Streptococcus
           salivarius SK126]
          Length = 230

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 101/194 (52%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             +    +K  + L   Y+  F++   P +VL+ L +   +  P    +          +
Sbjct: 42  AWASLSKDKALENLAKGYV--FILRCTPPIVLLFLVF---YGVPEFLNWWLGLDINDWSK 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + + +    +A I+E+ ++   A+P+GQ+EA +++GLT  +    ++ PQA +  +P
Sbjct: 97  LIFVLVTMVLLFSAMISEVFKAAYQAIPKGQLEAGLSIGLTSEQTFVRIIAPQAFKVALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            +T+  LNL+++++LA  +GF D++  G  +I++     ++E      F+Y  ++++++L
Sbjct: 157 NITTAILNLMRDAALAYTIGFIDVMGKGNLLISRHLGNYSLETYTAVAFVYWGIALILSL 216

Query: 384 FMNRLNAKIALKEK 397
                  ++++KE+
Sbjct: 217 ISRIAEQQLSVKER 230


>gi|78066234|ref|YP_369003.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77966979|gb|ABB08359.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia sp. 383]
          Length = 241

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 22/223 (9%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F             L + +     V    LG+ ++L                 P+  +  
Sbjct: 18  FPEGPLGGAALSLLLAIASAIASAVLGIALGVAMALARG--------------PVRVLLL 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             I     + ++ L +  +F  P+L   +        P   ++  AL+    A++A  V 
Sbjct: 64  AFIGFFRAIPVLMLIFWTYFLMPMLLHMDV-------PGLATVVCALALIGGAYLAHAVH 116

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++SLA  VG 
Sbjct: 117 AGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTSLAYIVGV 176

Query: 347 ADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRL 388
            +L  V   + N+       I L    IYL L   +      L
Sbjct: 177 PELSFVATQVNNRLMVYPAPIFLFVALIYLVLCTSLDGAARWL 219


>gi|323529955|ref|YP_004232107.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323386957|gb|ADX59047.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 248

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 14/206 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   S +LG ++ +    ++     +  + +   Y+   LI   P +V +   +  
Sbjct: 23  VTLALTAVSTLLGGLVGIAGASVA-VAGPRWARWVVASYVE--LIRNTPFIVQLFFVF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F          E  +  +A++    A+  EIVR+G+ ++ RGQ++AA ALG
Sbjct: 78  ---------FGLPSLGIHIDEIQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+  R ++LPQA+ ++ P L SQ L ++  S++   +   DL      I ++  ++ 
Sbjct: 129 LHGRQVFRYIVLPQALANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
           E  +I    YL LSI +   +NR   
Sbjct: 189 ESYVIITATYLLLSIALRQILNRFGR 214



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 39/95 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    YA  +  G   T  L     +   ++G    +  ++  +   W+   YVE+ R
Sbjct: 6   DFSGFGLYAGMLARGIAVTLALTAVSTLLGGLVGIAGASVAVAGPRWARWVVASYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P +V +FF++  + S+    D        M +N
Sbjct: 66  NTPFIVQLFFVFFGLPSLGIHIDEIQAAILAMTVN 100


>gi|260430904|ref|ZP_05784876.1| glutamine ABC transporter permease protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418345|gb|EEX11603.1| glutamine ABC transporter permease protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 277

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 13/222 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    + +   A       VLG++++L           K+    PL             +
Sbjct: 69  LEAFKINVMIFAWSAPAIAVLGLLIALARD-------TKSPALFPLRIFGAAFTDIFRGV 121

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I   Y + F  P LG          +  ++   +AL    +A++AEI RSG+ +V   
Sbjct: 122 PVILTVYLIGFGIPGLGL-----TRPWNSPYIWGSLALILTYSAYVAEIFRSGIDSVHHS 176

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA++LGLT  +  R V+LPQA+R+++P   +  + L K+ SL   +G  ++    G 
Sbjct: 177 QRAAALSLGLTEGQVMRDVVLPQAVRNVVPSQMNMLIALQKDVSLLSFIGPVEIFRQAGV 236

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             +         +    I+L ++I    + + L AK   + +
Sbjct: 237 FKSLLAN-FTPYVGAAIIFLIVTIPATRYADHLMAKQMRERR 277


>gi|116050135|ref|YP_791048.1| amino acid ABC transporter permease [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296389385|ref|ZP_06878860.1| amino acid ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|313110964|ref|ZP_07796804.1| putative amino acid permease [Pseudomonas aeruginosa 39016]
 gi|115585356|gb|ABJ11371.1| putative amino acid transport system permease [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|310883306|gb|EFQ41900.1| putative amino acid permease [Pseudomonas aeruginosa 39016]
          Length = 225

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 22/192 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   VLG+ L++             GK   LL         +P L    L +  +F  P+
Sbjct: 42  VLGLVLGVALAVL-----------PGKPRLLLVTLLGFFRAIPVL---MLIFWTYFLLPI 87

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +   +        P   ++  ALS    A++A  V +G+ ++P GQ  AA ALGL   + 
Sbjct: 88  VFHVDV-------PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQV 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            RLV+LPQA+  ++P   +Q+++L+K++SLA  +G  +L  V   + N+      EI L 
Sbjct: 141 LRLVILPQALPVMLPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLF 200

Query: 370 WMFIYLSLSIMI 381
              +Y  L   +
Sbjct: 201 VALLYFLLCTSL 212


>gi|324989769|gb|EGC21712.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
 gi|324992503|gb|EGC24424.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324995967|gb|EGC27878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|325697413|gb|EGD39299.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
 gi|327460727|gb|EGF07062.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327488811|gb|EGF20610.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
          Length = 230

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             ++   E++   L   YI  F++   P +VL+ L +   +  P   ++           
Sbjct: 42  AWAQIAEEQSFAGLARGYI--FILRCTPPIVLLFLVF---YGIPEFLEWWLGLDINNWSR 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I +    AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P
Sbjct: 97  TVFVIITMILLFAAMIAEVFKAAYLAVPKGQTEAGLSIGLTPLQTFLRIVLPQAFRIALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            LT+  LNL+++++LA  +G  D++  G  +I++     ++E       IY  ++++++L
Sbjct: 157 NLTTALLNLMRDAALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSL 216

Query: 384 FMNRLNAKIALKEK 397
               L   + +KE+
Sbjct: 217 ASQLLEKSLTVKER 230


>gi|294085011|ref|YP_003551771.1| polar amino acid uptake family ABC transporter permease [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664586|gb|ADE39687.1| polar amino acid uptake family ABC transporter, permease protein
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 250

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 8/237 (3%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           P  + +  +      + LS   +T+  +    + S V+GI+ +      ++       + 
Sbjct: 16  PRWNFIWMYQPVQQGKILSGIWMTIQLSVACLLLSMVIGILGAF-----AQGSRNALLRN 70

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               YI  F         L+   + L    P      ++    +S    +  I+LS +  
Sbjct: 71  FVQGYIQFFRNTPPYV-QLLFFYFALGQFTPTYSPDGWLEVPIISNVGWA-IISLSFFAG 128

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AF  EI R+G+ AVP    EA+ +LG T  +  R V+LP A R  +P L +  +NL+K +
Sbjct: 129 AFNVEIFRAGIEAVPESTKEASESLGFTRGQTFRYVVLPLAARVSLPALNNNLVNLVKTT 188

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           + A  +   +L+     I N    A+   +L+   +Y+ L  ++   MN+    + +
Sbjct: 189 TQAFGIAVPELLYQSVVIWNDYPSALYPTMLLVFVVYILLVGILVSGMNKWEKSMRI 245



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L+ + ++ + +IG L    + S N L+    + Y++ FRN PP V + F 
Sbjct: 32  ILSGIWMTIQLSVACLLLSMVIGILGAFAQGSRNALLRNFVQGYIQFFRNTPPYVQLLFF 91

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           Y ++    P       L   +  N                + +F
Sbjct: 92  YFALGQFTPTYSPDGWLEVPIISNVGWAIISLSFFAGAFNVEIF 135


>gi|255326958|ref|ZP_05368034.1| permease protein of ABC transporter for glutamate [Rothia
           mucilaginosa ATCC 25296]
 gi|255296175|gb|EET75516.1| permease protein of ABC transporter for glutamate [Rothia
           mucilaginosa ATCC 25296]
          Length = 227

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 24/225 (10%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGL 232
               +       + SFVLG VL+L         R     +  T +  PL  + TF I G+
Sbjct: 20  FMTNIQLTFWAALGSFVLGTVLALMRISPVPSLRWVGTAYVHTVRNTPLTIMMTFAILGV 79

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            T      ++QL F       F           F+   IALS Y +AFI E +RSG+  V
Sbjct: 80  WT------QFQLSFSHDFDTNF-----------FVYAVIALSIYHSAFICEAIRSGVNTV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EAA A+GL      RLV+ PQA+R  I PL +  + L KNS++A     A+   +
Sbjct: 123 PKGQAEAARAIGLGFFGTARLVIFPQALRGAITPLGNTLIALTKNSTVASVASVAEASGL 182

Query: 353 GGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++I       + I +++   ++ + + I       + K+A+K 
Sbjct: 183 MKSMIEFDANMVLAIFIMFAMGFVIIVVPIGALTTWSSRKLAVKR 227



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 33/96 (34%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           F+    L F   + + ++GT++   R+S    + W+   YV   RN P  +++ F    V
Sbjct: 20  FMTNIQLTFWAALGSFVLGTVLALMRISPVPSLRWVGTAYVHTVRNTPLTIMMTFAILGV 79

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            +   +                 LS         A 
Sbjct: 80  WTQFQLSFSHDFDTNFFVYAVIALSIYHSAFICEAI 115


>gi|167620109|ref|ZP_02388740.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis Bt4]
          Length = 236

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 22/199 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V    LG+ L+L    L        G                  + ++ L +  +F  PV
Sbjct: 57  VLGVALGVALALATGALRGALIVVIG--------------FFRAIPVLMLIFWTYFLLPV 102

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   +        P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT R+ 
Sbjct: 103 LLHADV-------PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRRQT 155

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            R VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+      +I L 
Sbjct: 156 VRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNRLMVYPAQIFLF 215

Query: 370 WMFIYLSLSIMIALFMNRL 388
              IYL L   + +    L
Sbjct: 216 VGVIYLILCTALDVAATWL 234


>gi|21910444|ref|NP_664712.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28896019|ref|NP_802369.1| amino acid ABC transporter (permease protein) [Streptococcus
           pyogenes SSI-1]
 gi|21904642|gb|AAM79515.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes MGAS315]
 gi|28811269|dbj|BAC64202.1| putative amino acid ABC transporter (permease protein)
           [Streptococcus pyogenes SSI-1]
          Length = 213

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + + S  LG +L+            K  +    LY+  +++ G P L
Sbjct: 12  LDGALVTLQVFFIVIILSIPLGAILAFLM-----KIPFKPLQWFLTLYV--WMMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +   ++  + 
Sbjct: 174 ATNRDA-TLAPMFIAGLIYLLLIGLVTIISKQVEKRF 209



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 35/100 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  +I +  +G ++        K + W   +YV + R  P L+ + F 
Sbjct: 11  LLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLTLYVWMMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + SV    D          LN              A 
Sbjct: 71  YYVLPSVGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAI 110


>gi|325062128|gb|ADY65818.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 221

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 14/215 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L            + + + V+G VL+     L R         + L Y   F   G   
Sbjct: 6   YLPMLWQGAVVTMTMTLAALVVGTVLAFCFGIL-RVEGGPILSTVALCYTEVF--RGTSL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV +   +  ++  P++                +  + L+ +   + AEIVR  L +V  
Sbjct: 63  LVQL---FWFYYALPLV--------GLSFDPVTTGVMVLAAHAGGYGAEIVRGALSSVSV 111

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+EAA AL  T  +    + LPQA+  ++P   +  +  LK SSL   +   DL     
Sbjct: 112 QQLEAARALNFTRMQTLFRISLPQAIVEMMPSFGNLAIETLKLSSLVSLISITDLTFAAQ 171

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +I N T  +  I  I +  Y ++S+++   +  + 
Sbjct: 172 SIRNLTLDSTSIYSITLLCYFAMSLILMAIIRVIE 206



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 33/71 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G V T  +  + ++  T++    G  R+    +++ +   Y EVFR    LV 
Sbjct: 6   YLPMLWQGAVVTMTMTLAALVVGTVLAFCFGILRVEGGPILSTVALCYTEVFRGTSLLVQ 65

Query: 145 IFFLYKSVLSV 155
           +F+ Y ++  V
Sbjct: 66  LFWFYYALPLV 76


>gi|254509570|ref|ZP_05121637.1| glutamine ABC transporter permease protein [Rhodobacteraceae
           bacterium KLH11]
 gi|221533281|gb|EEE36269.1| glutamine ABC transporter permease protein [Rhodobacteraceae
           bacterium KLH11]
          Length = 269

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 106/268 (39%), Gaps = 13/268 (4%)

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
            + +     +  +  I+FL         +          +    + L    + +   A  
Sbjct: 15  SLVIATISTVSVVAAIYFLVPLAPGWAKVQQSFFNGETLVKTFPKLLEAFRINVMIFACS 74

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
                +LG++++L           K+    PL             + +I   Y + F  P
Sbjct: 75  APAIAILGLLIALARDA-------KSPALFPLRIFGAAFTDIFRGVPVILTVYLIGFGIP 127

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            LG          +  ++   +AL    +A++AEI RSG+ +V   Q  AA++LGL+ R+
Sbjct: 128 GLGL-----PRPWNSPYIWGSLALILTYSAYVAEIFRSGIDSVHHSQRAAALSLGLSERQ 182

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LPQA+R+++P   +  + L K+ SL   +G  ++    G   +         + 
Sbjct: 183 VMRDVVLPQAIRNVVPSQMNMLIALQKDVSLLSFIGPVEIFRQAGVFKSLLAN-FTPYVG 241

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              I+L ++I    + + L A+   + +
Sbjct: 242 AAIIFLIVTIPATRYADHLMARQMRERR 269


>gi|294675894|ref|YP_003576509.1| glutamate/aspartate ABC transporter permease BztC [Rhodobacter
           capsulatus SB 1003]
 gi|3182936|sp|Q52665|BZTC_RHOCA RecName: Full=Glutamate/glutamine/aspartate/asparagine transport
           system permease protein BztC
 gi|1655714|gb|AAB17888.1| BztC [Rhodobacter capsulatus SB 1003]
 gi|294474714|gb|ADE84102.1| glutamate/aspartate ABC transporter, permease protein BztC
           [Rhodobacter capsulatus SB 1003]
          Length = 434

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 19/260 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LVV    +    + +     S +      +++       L +       V S  LGI+L+
Sbjct: 190 LVVAALFWLYAAAPIEAALQSALPLALPEVDSDQFGGFLLALVIGVTAIVVSLPLGILLA 249

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L      R       K+L +  I       L TL+  A     +F  P           T
Sbjct: 250 L-----GRQSDMLIVKSLSVGIIEFVRGVPLITLLFTASLLLQYFLPP----------GT 294

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                + + I ++ + AA+IAE++R GL A+PRGQ EAA ALGL + +A RL+++PQA++
Sbjct: 295 NFDLILRVVILVTLFAAAYIAEVIRGGLAALPRGQYEAADALGLDYWQAQRLIIMPQALK 354

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFAD----LVSVGGTIINQTGQAIEIILIWMFIYLSL 377
             IP + S ++ L K+++L   VG  D    + +V  + +   G   E  +    I+   
Sbjct: 355 ISIPGIVSSFIGLFKDTTLVAFVGLFDPLKGISNVVRSDMAWKGTYWEPYIFVALIFFLF 414

Query: 378 SIMIALFMNRLNAKIALKEK 397
           +  ++ +   L  K+    +
Sbjct: 415 NFSMSRYSMYLERKLKRDHR 434


>gi|87120915|ref|ZP_01076807.1| ABC-type amino acid transport system, permease component
           [Marinomonas sp. MED121]
 gi|86163753|gb|EAQ65026.1| ABC-type amino acid transport system, permease component
           [Marinomonas sp. MED121]
          Length = 371

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 56/262 (21%), Positives = 108/262 (41%), Gaps = 16/262 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            ++V   +   +  V  +     ++   ++    GL   +        I +F  ++G +L
Sbjct: 120 VVLVWRRISMKLKLVYIVAFLPALIFVLLYGGVFGLDSVSSNKFGGLIITIFLGLIGSIL 179

Query: 201 SL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           SL       L R       +   +  I  F    + T + +            L    F+
Sbjct: 180 SLPLGIFLALGRRSTRPVIRIFCVSVIELFRAMPMITWLFMG----------ALVLQLFL 229

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                  + + +   L   +AA  AEI+R+GL A+P GQ EA+ ALG+ + +   +V++P
Sbjct: 230 PNGMEVDKMIRVVFILVLVSAASKAEIIRAGLQAIPVGQFEASAALGVGYWRTMSMVIMP 289

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIY 374
           Q ++  IP + + ++ + K++SL   +G  D +SVG   +N        IE+ +    IY
Sbjct: 290 QVLKVSIPAMLNSFIGMFKDTSLVAIIGLLDFLSVGMATMNSDEWGKYGIEVYIFVAMIY 349

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
             +   I+ F   L  ++    
Sbjct: 350 FVILFTISRFSLTLEKQLETGH 371


>gi|239631652|ref|ZP_04674683.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526117|gb|EEQ65118.1| ABC-type amino acid transport system protein [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 218

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 13/194 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+   A   + S  LG++LS+      +    K GK L   Y+  F   G P L
Sbjct: 12  LSGVKMTLGIFAITLIGSIPLGLILSVGLIPKPKSILGKAGKGLLEGYVWVF--RGTPLL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   +   +  P++          V   F +  +A     A + AEI R G  A+  G
Sbjct: 70  LQLMFIF---YGLPII--------GLVFDRFSAALVAFILNYATYFAEIFRGGFGAIDEG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+  L +T  +A R V++PQ ++ ++P + ++ +NL+K+SSL   +G  DL+  G  
Sbjct: 119 QFEASTVLNMTRWQALRYVVIPQVVKIVLPSIGNEVINLVKDSSLVYVIGLGDLLRAGNI 178

Query: 356 IINQTGQAIEIILI 369
              +    + ++L+
Sbjct: 179 ASARDVTLVPLVLV 192


>gi|69248090|ref|ZP_00604619.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
 gi|258616183|ref|ZP_05713953.1| transport system membrane protein [Enterococcus faecium DO]
 gi|68194564|gb|EAN09056.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Enterococcus faecium DO]
          Length = 219

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTF 227
           M+      S    ++    +  V++  +G V   L                LPL     F
Sbjct: 1   MYFPLIDFSLMWTSLPFVLQGLVYTLGIGFVSFLLGNLVGLLLTVLGLLDWLPLNVFIRF 60

Query: 228 L---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G+P LVL+ L Y               G         +  I  +  ++AFI EI
Sbjct: 61  YLSFFRGIPALVLLFLLY--------------FGLPYQLSALTASVICFTITSSAFIGEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  ++L+K +SLA  +
Sbjct: 107 YRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++      I  +T     + ++   IY  + I I      L  +
Sbjct: 167 TVPEIFQKAKIIGGRTFDYFSLYILVALIYWVICIGIEKVQQYLEKR 213


>gi|325686600|gb|EGD28626.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
 gi|327462743|gb|EGF09065.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 230

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             ++   E++   L   YI  F++   P +VL+ L +   +  P   ++           
Sbjct: 42  AWAQIAEEQSFAGLARGYI--FILRCTPPIVLLFLVF---YGIPEFLEWWLGLDINNWSR 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I +    AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P
Sbjct: 97  TVFVIITMILLFAAMIAEVFKAAYLAVPKGQTEAGLSIGLTPAQTFLRIVLPQAFRIALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            LT+  LNL+++++LA  +G  D++  G  +I++     ++E       IY  ++++++L
Sbjct: 157 NLTTALLNLMRDAALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSL 216

Query: 384 FMNRLNAKIALKEK 397
               L   + +KE+
Sbjct: 217 ASQLLEKSLTVKER 230


>gi|307708311|ref|ZP_07644778.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus mitis NCTC 12261]
 gi|307615757|gb|EFN94963.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus mitis NCTC 12261]
          Length = 219

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFCLTLYISLIAIVLSTLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|209546710|ref|YP_002278628.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537954|gb|ACI57888.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 213

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V S ++G  +++    LS       G  +    I      G+P LV + L Y L  
Sbjct: 17  VTISVVSILIGFAIAIL---LSGMLLSGRGLFVRPAQIFISFFRGVPLLVELLLIYNL-- 71

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                            P  ++  I LS  TAA+ AE +R G  +VP G +E+A  +GLT
Sbjct: 72  ---------LPVIGINVPSIVAAIIGLSLCTAAYQAENLRGGFASVPLGLVESAEMVGLT 122

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
            R+  R + +P A+R   P L ++ + +LK SSL   VG  +L  +   +   T   +++
Sbjct: 123 PRQIFRRIKVPIALRLTFPALVNEAILILKASSLVSVVGIVELTRMAQDLAGSTFLPLQL 182

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
                 IYL ++ ++A     +  ++
Sbjct: 183 FASAGLIYLVINWLVAHAGVLIENRL 208


>gi|49474283|ref|YP_032325.1| ABC transporter, permease protein [Bartonella quintana str.
           Toulouse]
 gi|49239787|emb|CAF26177.1| ABC transporter, permease protein [Bartonella quintana str.
           Toulouse]
          Length = 235

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 107/239 (44%), Gaps = 6/239 (2%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           P+    L     LN  GL F +  + T   +F+ +  LG +L +  T  +R  + K  + 
Sbjct: 3   PEWLHFLFNPALLNRYGLKFISGFLITFELVFI-ACSLGFILGMLIT-FARLLNNKFLRY 60

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               Y+  F   G P L  + L Y          Q   +     +  +  ++I  +  +A
Sbjct: 61  FANTYVYFF--RGSPLLAQLFLFYYGLGSMGSFWQQIGLWWFFQNAWYCCIFI-FALNSA 117

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ +EI +   ++V   Q EA+ ALGL+       ++LPQAM   + PL ++++ ++K+S
Sbjct: 118 AYQSEIFKGSFLSVTARQREASKALGLSSSTTFFRIILPQAMVLALRPLGNEFILMIKSS 177

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++A  V   DL+ +     ++T    ++ +    IYL +  +I  F+  +   +    +
Sbjct: 178 AIASLVTIYDLMGIAKLTYSRTFD-FQVYVWAALIYLLIVELIHRFIVVIERHLTRYLR 235



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 34/90 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    + GF+ TF L F       I+G L+   RL  NK + +    YV  FR  P L 
Sbjct: 17  RYGLKFISGFLITFELVFIACSLGFILGMLITFARLLNNKFLRYFANTYVYFFRGSPLLA 76

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            +F  Y  + S+        +  F      
Sbjct: 77  QLFLFYYGLGSMGSFWQQIGLWWFFQNAWY 106


>gi|83941462|ref|ZP_00953924.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Sulfitobacter sp. EE-36]
 gi|83847282|gb|EAP85157.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Sulfitobacter sp. EE-36]
          Length = 431

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 19/223 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R +    L M         S  +GI+L+L      R       K + +++I       L 
Sbjct: 219 RNMGGFMLNMILGVICVSLSLPMGILLAL-----GRQSSLPIIKLICVVFIEFIRGVPLI 273

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           T     + + I ++ + +A+IAE++R GL A+P
Sbjct: 274 TLLFVANVVLAYFLPP----------GTNFDLILRVIIMITMFASAYIAEVIRGGLAALP 323

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VS 351
           RGQ EAA +LGL + +A RL++LPQA++  IP + +  + L K+++L   +   DL  + 
Sbjct: 324 RGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSIISMFDLVGMI 383

Query: 352 VGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  + +    G   E+      ++  +   I+ +   L  ++
Sbjct: 384 RGPILASTDWNGVYWELWGFAALLFFVVCYGISQYSQWLERQL 426


>gi|87121345|ref|ZP_01077235.1| putative transport system permease abc transporter protein
           [Marinomonas sp. MED121]
 gi|86163502|gb|EAQ64777.1| putative transport system permease abc transporter protein
           [Marinomonas sp. MED121]
          Length = 242

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 93/237 (39%), Gaps = 3/237 (1%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           +        V     F            +  + +I +  F+ G+V+  F   L +     
Sbjct: 1   MFIDYQSMSVWQLLAFEAPGWGGTLLSGLLLSLEIAILGFLFGLVIGFFG-ALGKLGKSI 59

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             +   L    T ++  +P LVLI L Y    +            +     F++  + +S
Sbjct: 60  VCRD--LWSCYTTVVRAIPELVLILLIYFALPNLLNSLLSLVGISNIEINGFIAGVLVIS 117

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               A+  E+VRS ++A+P GQ+EAA A  +   K    + LP  +   +P L++ +L  
Sbjct: 118 FVQGAYATEVVRSAMLAIPAGQIEAAHAFAMPKYKILYRISLPAMLPHALPGLSNLWLIA 177

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            K+++L   VGF +L          T + +  + +   +YL +S++          +
Sbjct: 178 TKDTALLAVVGFTELTLAARQAAGATKEQLLFLTVAGGLYLCISLVSDALFKYFIRR 234


>gi|172039038|ref|YP_001805539.1| amino acid ABC transporter permease, His/Glu/Gln/Arg/opine
           [Cyanothece sp. ATCC 51142]
 gi|171700492|gb|ACB53473.1| amino acid ABC transporter permease protein, His/Glu/Gln/Arg/opine
           [Cyanothece sp. ATCC 51142]
          Length = 391

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 69/291 (23%), Positives = 120/291 (41%), Gaps = 19/291 (6%)

Query: 103 GMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++ A  I  +  A  L+   L      +  ++ +  P     +      ++   +    
Sbjct: 116 SVLLAIPISLISSAMLLAILFLFIIFVVLGQQISQTFPN-FKNWLSLLWFITFFLLLGLL 174

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F   +     S   LT+       V SF  GI+L+L      R  +    + L + 
Sbjct: 175 QGAFFLRDVRLDDFSGLILTIFVAVISIVLSFPFGILLAL-----GRQSNLPVIRWLSIG 229

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI          L LI + +      P++     +         +      + ++AA++A
Sbjct: 230 YIELIR-----GLPLIGILFMAQVMLPLI-----LPQEMRIQRVVRAIAGFTLFSAAYLA 279

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E VR GL +VP+GQ+EAA A+GL       LV+LPQA+R +IP +  Q+++L K++SL  
Sbjct: 280 ENVRGGLQSVPKGQIEAAKAVGLNGFFVLILVVLPQALRVVIPTIVGQFISLFKDTSLLA 339

Query: 343 AVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            VG  DL+ +  +I+      G   E+ L    IY      ++L   +L  
Sbjct: 340 IVGLVDLLGISQSILANPKFIGTYGEVYLFVAAIYWIFCYSMSLLSRKLEK 390



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 19/205 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T ++A   ++ +   G L+  GR S   ++ W+   Y+E+ R +P + ++F   
Sbjct: 188 FSGLILTIFVAVISIVLSFPFGILLALGRQSNLPVIRWLSIGYIELIRGLPLIGILFMAQ 247

Query: 150 KSVLSVLPIPDHS------------IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             +  +LP                     +       GL          AK    +    
Sbjct: 248 VMLPLILPQEMRIQRVVRAIAGFTLFSAAYLAENVRGGLQSVPKGQIEAAKAVGLNGFFV 307

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++L +    L        G+ + L             L ++ L   L   + +L    FI
Sbjct: 308 LILVVLPQALRVVIPTIVGQFISL-------FKDTSLLAIVGLVDLLGISQSILANPKFI 360

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIA 282
           G       F++    + CY+ + ++
Sbjct: 361 GTYGEVYLFVAAIYWIFCYSMSLLS 385


>gi|87124568|ref|ZP_01080417.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. RS9917]
 gi|86168140|gb|EAQ69398.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. RS9917]
          Length = 301

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 88/272 (32%), Positives = 132/272 (48%), Gaps = 18/272 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P        P     ++       +    + K+ V   +L  +L 
Sbjct: 32  LIRTGLGLSFRWLSRPAGFALAEHPLPYAPSDSYAWALLMGWLNSLKVIVAGLILATLLG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD-----------KPV 250
           + A   +R       + L  LY+   LI  +P L+ +   Y + F             P 
Sbjct: 92  VSAGA-ARRSANALLRWLAALYVG--LIRQIPLLLQLLFWYFVAFLGLPPASEPLSPLPA 148

Query: 251 LGQFNFIG----GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           L + +  G    G  +S EF ++ + LS ++ A IAE+VR GL AVPRGQ EA  +LGL 
Sbjct: 149 LLRLSNQGIELLGVPLSVEFSAVLVGLSVFSGAAIAELVRGGLDAVPRGQWEAFRSLGLP 208

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LPQA+ +I+P L+SQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE 
Sbjct: 209 EGLGLRRVILPQALPAILPGLSSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIEG 268

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L+ +  +L L+++I   M  LN  +     +
Sbjct: 269 FLLLLLSFLLLNLLINGGMQLLNRVVVSGRHR 300



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/142 (31%), Positives = 74/142 (52%)

Query: 24  VHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDS 83
                +Q ++ L    +    VNN+  N+ ++ L L   +LS  AGF + +  +PY    
Sbjct: 4   RRRWWLQALVVLAALTLLGLLVNNLTVNLIRTGLGLSFRWLSRPAGFALAEHPLPYAPSD 63

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SYA A+L+G++N+  +  +G+I AT++G   GA R SAN L+ W+  +YV + R IP L+
Sbjct: 64  SYAWALLMGWLNSLKVIVAGLILATLLGVSAGAARRSANALLRWLAALYVGLIRQIPLLL 123

Query: 144 VIFFLYKSVLSVLPIPDHSIVL 165
            + F Y      LP     +  
Sbjct: 124 QLLFWYFVAFLGLPPASEPLSP 145


>gi|289168269|ref|YP_003446538.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
 gi|288907836|emb|CBJ22676.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
          Length = 226

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRLR 213



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F+ T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFLLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEA 111


>gi|290960129|ref|YP_003491311.1| binding-protein-dependent ABC transporter transmembrane protein
           [Streptomyces scabiei 87.22]
 gi|260649655|emb|CBG72770.1| putative binding-protein-dependent transport system integral
           membrane component [Streptomyces scabiei 87.22]
          Length = 216

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 84/217 (38%), Gaps = 16/217 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYIS 225
           M  +   L            + + + + G +L+        L++    K  +        
Sbjct: 1   MTWDWSTLDDFMPAFRDGVLVTLQALLWGSLLAFSLGLVWALAQRSSLKAVRWPVKAVTE 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I   P LV +   + +                       +  + L  + + + AE+ 
Sbjct: 61  F--IRNTPLLVQLFFLFYV-----------LPEWGLTLSALATGVLGLGLHYSTYTAEVY 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+  VP GQ EAA AL L   +    V+LPQA+R + P L +  + +LK+S + + +G
Sbjct: 108 RAGIDGVPAGQWEAATALSLPRSRTWTAVILPQALRRVAPALGNYVIAMLKDSPMLMTIG 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             +++       ++T Q  E I+     ++ ++   +
Sbjct: 168 VLEMLGEARQFGSRTFQMNEAIVTVGIAFILIAYPAS 204



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 33/78 (42%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   +  A   G + T      G + A  +G +    + S+ K V W  +   E  R
Sbjct: 4   DWSTLDDFMPAFRDGVLVTLQALLWGSLLAFSLGLVWALAQRSSLKAVRWPVKAVTEFIR 63

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P LV +FFL+  +   
Sbjct: 64  NTPLLVQLFFLFYVLPEW 81


>gi|237665991|ref|ZP_04525979.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237658938|gb|EEP56490.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 221

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 13/193 (6%)

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              +  +F  K  + +   YI   L    P LV I   + L+F  P L            
Sbjct: 39  VCSIILYFKVKILEKIVQAYIE--LSRNTPLLVQI---FFLYFGLPKL--------GLKM 85

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
            E     I L+    +++AE  RSGL AV + Q+E+ I++GL+  +  R V++PQA    
Sbjct: 86  SETTCAVIGLAFLGGSYMAEAFRSGLEAVSKSQIESGISIGLSKTQLIRYVIIPQAFSIS 145

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P +++ ++ LLK +S+  A+   ++ ++   +I    +  E + + + +YL + + I+ 
Sbjct: 146 MPSISANFIFLLKETSILGAISIIEVTNLTKDLIGMYYRTFESLAMLVIVYLIIILPISF 205

Query: 384 FMNRLNAKIALKE 396
            ++ L  K+   E
Sbjct: 206 VLSLLERKLRYAE 218


>gi|218678602|ref|ZP_03526499.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 894]
          Length = 134

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/127 (40%), Positives = 83/127 (65%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
             +L +A+   +A+FIAE VR  + A+P+ Q EAA +LGL+ R     ++LPQ  R ++P
Sbjct: 1   MAALLLAIVVSSASFIAETVRGAIDALPKAQWEAAGSLGLSRRDTVNDIILPQVFRVVLP 60

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              +QY++L KN++L +AVG+ DL ++ GTI NQTG ++E I+I M  YL LS +I+  +
Sbjct: 61  SFGNQYISLTKNTALGIAVGYPDLFNIYGTIANQTGHSLEGIIIVMASYLILSWIISSSV 120

Query: 386 NRLNAKI 392
              N ++
Sbjct: 121 YWANRRL 127


>gi|153011817|ref|YP_001373030.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
 gi|151563705|gb|ABS17201.1| polar amino acid ABC transporter, inner membrane subunit
           [Ochrobactrum anthropi ATCC 49188]
          Length = 226

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 14/213 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                  +     I   +  LG+ L             K  + +   Y+           
Sbjct: 13  WPSLLNGLVMTIVITAVASFLGVCLGTL-CAWGSLKARKFLRIIIRCYVEFTRNTPF--- 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             +   + + F  P L                +  +A++    A+  EI+R+G+ A PRG
Sbjct: 69  --LGQIFFIFFGLPTL--------GLKMNSLTAAIVAMTFNLTAYACEIIRAGIEATPRG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA+ ALGL   +   LV++P A + + P +TSQ + +L  S+L   +  A+L  V   
Sbjct: 119 QFEASDALGLKPVQTFFLVVIPPAFQRVWPAMTSQLVIILLASALCSQISVAELSYVANV 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           I ++T +  E  ++   +YL L+I     +  +
Sbjct: 179 IASRTFRNFEAYIVVTILYLFLAIFFRKLLVWV 211



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 39/98 (39%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            +  +    S   ++L G V T  +          +GTL   G L A K +  I R YVE
Sbjct: 2   SLSSFIDVLSAWPSLLNGLVMTIVITAVASFLGVCLGTLCAWGSLKARKFLRIIIRCYVE 61

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
             RN P L  IFF++  + ++    +        M  N
Sbjct: 62  FTRNTPFLGQIFFIFFGLPTLGLKMNSLTAAIVAMTFN 99


>gi|327468421|gb|EGF13906.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
 gi|327472448|gb|EGF17879.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 230

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             ++   E++   L   YI  F++   P +VL+ L +   +  P   ++           
Sbjct: 42  AWAQIAEEQSFAGLARGYI--FILRCTPPIVLLFLVF---YGIPEFLEWWLGLDINNWSR 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I +    AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P
Sbjct: 97  TVFVIITMILLFAAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIVLPQAFRIALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            LT+  LNL+++++LA  +G  D++  G  +I++     ++E       IY  ++++++L
Sbjct: 157 NLTTALLNLMRDAALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSL 216

Query: 384 FMNRLNAKIALKEK 397
               L   + +KE+
Sbjct: 217 ASQLLEKSLTVKER 230


>gi|315612722|ref|ZP_07887633.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|315314832|gb|EFU62873.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
          Length = 219

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSTQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY   +  I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFIFNFAISSLSHMLAKR 213



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|126667083|ref|ZP_01738058.1| ABC transporter, membrane spanning protein (amino acid)
           [Marinobacter sp. ELB17]
 gi|126628489|gb|EAZ99111.1| ABC transporter, membrane spanning protein (amino acid)
           [Marinobacter sp. ELB17]
          Length = 217

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 98/221 (44%), Gaps = 18/221 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L     T+  +    V   +LG+ +       S+  +   G  L +L     +I    
Sbjct: 15  FILIGVMNTVTISIVAIVLGTLLGLAVGFLRAESSKVVNVLLGSVLDILRSVPLIIQ--- 71

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             +++   +      P+               F++  I LS YT AF++E+ RSG  +V 
Sbjct: 72  --LILFSTFVGAMGYPL-------------DPFVAGSIILSLYTMAFMSEVFRSGFESVH 116

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +    +A +LG+++ +    + LP  +R++ P      L+++K+S+L   +G+ +L+   
Sbjct: 117 QSMRTSARSLGMSYWQTIFYIRLPIGLRAVFPSWLGVALSVIKDSALVSVIGYMELLRTS 176

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I++T Q + I++     Y  +S  ++ +   +  K+A+
Sbjct: 177 DQLISRTQQPLMILIGVGIFYFIISYPLSSYGRYVERKMAI 217



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 35/69 (50%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S    IL+G +NT  ++   ++  T++G  VG  R  ++K+V  +    +++ R++P 
Sbjct: 9   SWSDTGFILIGVMNTVTISIVAIVLGTLLGLAVGFLRAESSKVVNVLLGSVLDILRSVPL 68

Query: 142 LVVIFFLYK 150
           ++ +     
Sbjct: 69  IIQLILFST 77


>gi|330950462|gb|EGH50722.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 225

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 41  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 88  LSPMATGVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPF 147

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 148 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 207

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 208 WLVKRYEQH 216



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  +     +   ++  ++   RLS  + + W   VYVEV R I  LV+
Sbjct: 14  IARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMATGVLGL 98


>gi|329118223|ref|ZP_08246933.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465644|gb|EGF11919.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 239

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 16/227 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF---ATRLSRHFHEKTGKALPLLYIST 226
           F+N   L          AK+ +   + GI LSL    A  +   +  +   A    YI  
Sbjct: 20  FMNWTYLFNAVPKFAEAAKLTLELSLYGIALSLLFGLAVAVVTAYKIRPLYAPARAYIE- 78

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            L    P L+ +   Y                       F    IAL+   A+++AE +R
Sbjct: 79  -LSRNTPLLIQLFFLYY-----------GLPKAGIKWDGFTCGVIALAFLGASYMAEALR 126

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G++AVP+GQ+EA  A+GL+  +  R V LPQA    +P + +  L L+K +S+  AVG 
Sbjct: 127 AGILAVPQGQIEAGKAVGLSRWQVFRYVELPQAWAVALPAVGANVLFLIKETSVVSAVGV 186

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+L+ V   II    +  E +L+    YL + + ++L       ++ 
Sbjct: 187 AELLFVTKDIIGMDYKTNEALLLLFAAYLVILLPLSLLARWAENRVR 233



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L+  G+  + + G  V        + +    R Y+E+ RN P L+ +FFLY  +   
Sbjct: 40  TLELSLYGIALSLLFGLAVAVVTAYKIRPLYAPARAYIELSRNTPLLIQLFFLYYGLPKA 99

Query: 156 LPI 158
              
Sbjct: 100 GIK 102


>gi|307352566|ref|YP_003893617.1| polar amino acid ABC transporter inner membrane subunit
           [Methanoplanus petrolearius DSM 11571]
 gi|307155799|gb|ADN35179.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanoplanus petrolearius DSM 11571]
          Length = 236

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 13/227 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF-ATRLSRHFHEKTGKALPLLYISTF 227
           +      L+   +T+   A       ++G+ +++         + +K  KA   +++  F
Sbjct: 8   IDWAPYLLTGIFVTLGLTAAGLGLGVIIGLPMAIGQVYSTGIRWVDKIMKAFIAVFVWFF 67

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              GLP LVL+ L Y         G F  +G   ++P F+   I L    AA+ ++I R 
Sbjct: 68  --RGLPILVLLFLFYF--------GIFPLMGMGDLAPFFVGA-IVLGLRGAAYQSQIFRG 116

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++  GQM AA +LG+T   A + V+LPQ+ R  +P  +++Y N+L +S++  A+G A
Sbjct: 117 AIQSISEGQMTAARSLGMTKLSAIKNVILPQSFRIALPGWSNEYPNILTDSAVCYAIGVA 176

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +L++    I +QT +   I L+   +++ L+      +  L  +IA+
Sbjct: 177 ELLTRSSQIASQTYEY-TIYLVCAVLFIILNYAGTKGLLILENRIAI 222


>gi|255280681|ref|ZP_05345236.1| amino acid ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
 gi|255268618|gb|EET61823.1| amino acid ABC transporter, permease protein [Bryantella
           formatexigens DSM 14469]
          Length = 218

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 12/210 (5%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                   +FS  LG++L+       R           L+ +  ++I G P ++ + + +
Sbjct: 17  FQIFFFTLIFSLPLGLLLAFGTISKCRPLSY-------LIQLIVWIIRGTPLMLQLIIIF 69

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                 P L   + I     +    +  +A +   A + + I R G+  VP GQ EA   
Sbjct: 70  Y----GPGLWFGHNIWSGGEAGRITATVVAFTINYACYFSVIFRGGIEGVPAGQREAGQV 125

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T  +    V L Q ++ I+PP++++ + L+K++SLA  +   +L   G + +   G 
Sbjct: 126 LGMTKSQIFFKVTLLQMIKRIVPPMSNEIITLVKDTSLARIIAAQELTFAGYSFMKSAGL 185

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +       YL    ++ L  N +  K+
Sbjct: 186 TWPLFYT-GVFYLVFVGILTLLFNYIEKKL 214


>gi|207724365|ref|YP_002254762.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206589583|emb|CAQ36544.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 227

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 11/210 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            N  I + +  LG V  L    L R    +  + L   Y+          LV     Y +
Sbjct: 22  VNVGISLLAVGLGTVAGLAVGAL-RLSPLRPVQRLAGGYVIALRNVPWLVLV-----YFM 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P   +    G     P+++ + +AL+   +A +AEI R  ++++P  Q EAA +L 
Sbjct: 76  SYALPF--EIVLRGHVLPFPDWLKVTLALALPASAHVAEIFRGAVLSIPSTQWEAAASLA 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTG 361
              R     ++LPQ +R ++P   +    +   ++LA  VG  DL+         +N+T 
Sbjct: 134 FRRRDILWRIVLPQCVRRMLPSWMNLVAIIAMGTALASLVGVHDLLDTAQIASNTVNRTP 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +      + ++      IA    RL  +
Sbjct: 194 FTVATYFTVLGLFFLYCYPIARLTRRLEHR 223



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 42/85 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A A+L G      ++   +   T+ G  VGA RLS  + V  +   YV   RN+P LV+
Sbjct: 12  WAPALLRGLSVNVGISLLAVGLGTVAGLAVGALRLSPLRPVQRLAGGYVIALRNVPWLVL 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++F+  ++   + +  H +  P  +
Sbjct: 72  VYFMSYALPFEIVLRGHVLPFPDWL 96


>gi|171317738|ref|ZP_02906920.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097088|gb|EDT41941.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 255

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + S V+GI L+L A       R S        +  PLL     L +G   +V        
Sbjct: 32  IASVVIGIPLALAASSRHAPYRWSARGWIMLIRGTPLLVQLYLLYYGFGQIV-------- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P     +      +   F    +ALS    A++A I+R  +  VP G++EA  A G
Sbjct: 84  ----PREWMRDSWASPLLRDAFWYAVVALSVNEGAYVATILRGAIAGVPAGEIEAGYAYG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T     R ++ P+A R  +P LT + + LLK++ LA  V   D++    T+  +T +  
Sbjct: 140 MTRAGVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVMGTANTLRFETLRVY 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E +     +Y+ L  ++ +   RL   +   
Sbjct: 200 EPLAGAAIVYVVLVALLTIPAARLEKHLNRY 230


>gi|159042876|ref|YP_001531670.1| glutamate/glutamine/aspartate/asparagine ABC transport system
           permease [Dinoroseobacter shibae DFL 12]
 gi|157910636|gb|ABV92069.1| glutamate/glutamine/aspartate/asparagine ABC transport system
           permease [Dinoroseobacter shibae DFL 12]
          Length = 432

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 114/263 (43%), Gaps = 19/263 (7%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +  L      +  +  +      S+V      + +R +    +           S  LGI
Sbjct: 185 VAALFATLLFWIFISPLAVNALSSVVALSLPQVESRFIGGFMINFILGTSGIALSLPLGI 244

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L+L      R  +    K + +++I       L TL+ +A     +F  P         
Sbjct: 245 ALAL-----GRQSNLPIIKGVCVVFIEFIRGVPLITLLFVASVMLAYFLPP--------- 290

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             T     + + I ++ + +A+IAE +R GL A+PRGQ EA  +LGL + ++ RL++LPQ
Sbjct: 291 -GTSFDLVLRVIIMITLFASAYIAEAIRGGLAALPRGQYEAGDSLGLDYWQSMRLIILPQ 349

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-IINQT---GQAIEIILIWMFIY 374
           A++  IP + +  + L K+++L   +   D++ +    I++ T   G   E++     ++
Sbjct: 350 ALKISIPSIVNIAIGLFKDTTLVSIISMFDMLGMIQGPILSSTEWFGVYWELLGFAGVLF 409

Query: 375 LSLSIMIALFMNRLNAKIALKEK 397
                 I+ +   L  ++A + +
Sbjct: 410 FVFCYGISQYSQWLERQLATEHR 432


>gi|306822262|ref|ZP_07455643.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|304554424|gb|EFM42330.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
          Length = 234

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 4/226 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F M       +           + VFS  LG++       +  +        + LL  
Sbjct: 1   MTFDMQYALEHFTDILQAAPVAIWVTVFSAFLGLLGGAIFCTIRLNSIPLLSTIIGLL-- 58

Query: 225 STFLIFGLPTLVLIALK-YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
              LI   P LV + +  Y +     +L     +  +          +  S Y + +  E
Sbjct: 59  -VSLIRSTPILVQLYVVCYGMPRITALLHHDPKLAANVNIYPNTVAIVTFSLYASVYFCE 117

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R     V  GQ EA  +L L    A   +++PQA  + +P L++  +++LKN+SL   
Sbjct: 118 IFRGAYYTVDEGQREAIRSLNLPPLHALLRIVVPQAAINAVPNLSNSVIDMLKNTSLLYT 177

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +   D+++    I +++ + IEI      +YL ++I++      L 
Sbjct: 178 ISVMDIMARATIIGSESFKFIEIYTDAFIVYLGIAIVLFALFALLE 223


>gi|330977256|gb|EGH77212.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 221

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++     +LG+ L +    + R +  +    +  +Y+   LI   P LV +   +    
Sbjct: 25  LELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE--LIRNTPFLVQLFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          E+ +  +A+     A+  EIVR+G+ A+P+GQ+EA+ AL ++
Sbjct: 78  -------FGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAIPKGQLEASAALAVS 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+L  A+  + P L+SQ + ++  SS+   +   +L      I ++  ++ E 
Sbjct: 131 RYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATEELSFYANFIQSRNFRSFET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            ++   IYL+++++I   +  +  +   + +
Sbjct: 191 YIVTTLIYLAMALLIRQLLAWIGRRYISRNR 221



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQSIDLLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAI 116


>gi|15601991|ref|NP_245063.1| arginine transporter permease subunit ArtM [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|12720339|gb|AAK02210.1| ArtM [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 227

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/233 (21%), Positives = 97/233 (41%), Gaps = 18/233 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL--PLLYISTFL 228
           +           + T+  +   S V+   L+L        F    G  L    ++    L
Sbjct: 1   MFQDYFMVIAQGIPTSLLLTFVSLVVAFFLALLL-----TFGLSIGNKLVKCGIHTYLTL 55

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEI 284
             G P LV   L Y         GQF ++  S + P     +    + L+  +AA+   +
Sbjct: 56  FTGTPLLVQFFLIYAGP------GQFEWLVDSALWPLLSNAWFCAMLTLALNSAAYSTLL 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
               + A+ +GQ E+  ALGLT  +    +L+P A++  +P  +++ + + K ++LA  +
Sbjct: 110 FHGAVKAISKGQWESCAALGLTRMETL-KILIPYALKRALPSYSNEIILVFKGTALASTI 168

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              D++     +      A+ I  I   IYL ++ +  L + +L +K+   E+
Sbjct: 169 TIMDIMGYARQLYGTEYDALTIYGIAGMIYLIITAIATLLLRKLESKVLSFER 221


>gi|289168424|ref|YP_003446693.1| ABC-type amino acid transporter, membrane-spanning permease
           [Streptococcus mitis B6]
 gi|307704347|ref|ZP_07641264.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
 gi|288907991|emb|CBJ22831.1| ABC-type amino acid transporter, membrane-spanning permease
           [Streptococcus mitis B6]
 gi|307622107|gb|EFO01127.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK597]
          Length = 219

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|83747213|ref|ZP_00944256.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum
           UW551]
 gi|207739074|ref|YP_002257467.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83726188|gb|EAP73323.1| Amino acid ABC transporter permease protein [Ralstonia solanacearum
           UW551]
 gi|206592446|emb|CAQ59352.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 227

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 85/210 (40%), Gaps = 11/210 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            N  I + +  LG V  L    L R    +  + L   Y+          LV     Y +
Sbjct: 22  VNVGISLLAVGLGTVAGLAVGAL-RLSPLRPVQRLAGGYVIALRNVPWLVLV-----YFM 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P   +    G     P+++ + +AL+   +A +AEI R  ++++P  Q EAA +L 
Sbjct: 76  SYAVPF--EIVLRGHVLPFPDWLKVTLALALPASAHVAEIFRGAVLSIPSTQWEAAASLA 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTG 361
              R     ++LPQ +R ++P   +    +   ++LA  VG  DL+         +N+T 
Sbjct: 134 FRRRDILWRIVLPQCVRRMLPSWMNLVAIIAMGTALASLVGVHDLLDTAQIASNTVNRTP 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +      + ++      IA    RL  +
Sbjct: 194 FTVATYFTVLGLFFLYCYPIARLTRRLEHR 223



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 42/85 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A A+L G      ++   +   T+ G  VGA RLS  + V  +   YV   RN+P LV+
Sbjct: 12  WAPALLRGLSVNVGISLLAVGLGTVAGLAVGALRLSPLRPVQRLAGGYVIALRNVPWLVL 71

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++F+  +V   + +  H +  P  +
Sbjct: 72  VYFMSYAVPFEIVLRGHVLPFPDWL 96


>gi|326803926|ref|YP_004321744.1| putative glutamine ABC transporter, permease protein GlnP
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651679|gb|AEA01862.1| putative glutamine ABC transporter, permease protein GlnP
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 215

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/155 (30%), Positives = 82/155 (52%), Gaps = 9/155 (5%)

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L L+ + +  +F  P +G    I        F +   A++ + +  I+EI+R G+ AVP+
Sbjct: 65  LPLLLIIFFTYFALPQIGLRLNI--------FWAAVAAMTIFESCMISEIIRGGMNAVPK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQMEA ++ G T  +   L++LPQA+RS++P + SQ + L+K++SLA  +   +L     
Sbjct: 117 GQMEAGLSTGFTRGQVIILIILPQAIRSMLPSIVSQLIALIKDTSLATVISLPELTHNAR 176

Query: 355 TIINQ-TGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            I  Q T   I I +   F+Y     +++    RL
Sbjct: 177 IIYGQETSYVIPIFVAMTFLYWITCFLLSRLAKRL 211



 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 34/67 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ + ++GT +G  R      +A    + V+  RN+P L++IFF 
Sbjct: 15  LLEGLWVTLKVTGITILLSLLLGTFLGVIRYLKLPFIAKGVGLVVDTIRNLPLLLIIFFT 74

Query: 149 YKSVLSV 155
           Y ++  +
Sbjct: 75  YFALPQI 81


>gi|227833321|ref|YP_002835028.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184305|ref|ZP_06043726.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454337|gb|ACP33090.1| glutamate ABC transport system, permease protein [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 228

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 7/231 (3%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
               L         LT+       + + +LG +L+       R       + +   YI+T
Sbjct: 4   MWAALGPELWPAFWLTIQLTFWSAIGAMLLGTILTAM-----RVSPVGILRWIATTYITT 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                L TL+++   + L+ +  +           V   F    +    YT+AF+AE +R
Sbjct: 59  VRNTPL-TLIILFCSFGLYQNLGLTLASKDSSTFLVDNNFRLAIVGFVLYTSAFVAESLR 117

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+  V  GQ EAA +LGL+  +    ++ PQA+R+ I PL +  + L KN+++A A+G 
Sbjct: 118 SGINTVDFGQAEAARSLGLSFSQTFSTIIFPQAVRAAIVPLGNTLIALTKNTTIASAIGV 177

Query: 347 ADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +  + I     Q   I  I+   ++ L++ + + + +L+  +A+K+
Sbjct: 178 AEASLLMKSTIEMHASQLFLIFFIFAAGFIILTLPMGVGLGKLSETLAVKK 228



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 43/99 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +   F  T  L F   I A ++GT++ A R+S   ++ WI   Y+   RN P  ++I F 
Sbjct: 12  LWPAFWLTIQLTFWSAIGAMLLGTILTAMRVSPVGILRWIATTYITTVRNTPLTLIILFC 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
              +   L +   S      +  NN  L+     + T+A
Sbjct: 72  SFGLYQNLGLTLASKDSSTFLVDNNFRLAIVGFVLYTSA 110


>gi|29653826|ref|NP_819518.1| arginine ABC transporter permease [Coxiella burnetii RSA 493]
 gi|153208871|ref|ZP_01947093.1| arginine ABC transporter, permease protein [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154707334|ref|YP_001424931.1| arginine transport system permease protein [Coxiella burnetii
           Dugway 5J108-111]
 gi|161831604|ref|YP_001596413.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA
           331]
 gi|165920607|ref|ZP_02219578.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA
           334]
 gi|212218911|ref|YP_002305698.1| arginine transport system permease protein [Coxiella burnetii
           CbuK_Q154]
 gi|29541089|gb|AAO90032.1| arginine transport system permease protein [Coxiella burnetii RSA
           493]
 gi|120575660|gb|EAX32284.1| arginine ABC transporter, permease protein [Coxiella burnetii 'MSU
           Goat Q177']
 gi|154356620|gb|ABS78082.1| arginine transport system permease protein [Coxiella burnetii
           Dugway 5J108-111]
 gi|161763471|gb|ABX79113.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA
           331]
 gi|165916809|gb|EDR35413.1| arginine ABC transporter, permease protein [Coxiella burnetii RSA
           334]
 gi|212013173|gb|ACJ20553.1| arginine transport system permease protein [Coxiella burnetii
           CbuK_Q154]
          Length = 221

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 7/203 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + + + G+ L++  T L+     K  K++ +  I+ F+      LVL A+ + 
Sbjct: 16  MVTLAVSLCAVIFGMGLAILFT-LTEFSQLKFLKSI-VKSITAFIRGLPELLVLFAIYFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L        S     F +  +AL    AA+  + +R  L+A+P+GQ EA  A+
Sbjct: 74  GSALLTKL-----FHRSVQVSAFSAGVLALGMIFAAYATQTLRGALLAIPKGQTEAGKAM 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL      + ++LPQA    +P L + +L LLK+S+L   +G  DL++      + T + 
Sbjct: 129 GLPGWIIFKRIVLPQAWHHALPGLGNLWLVLLKDSALVALIGLGDLMNKAQLAASTTREP 188

Query: 364 IEIILIWMFIYLSLSIMIALFMN 386
            +  ++  F++L L+ +  L + 
Sbjct: 189 FKFYVMAAFLFLLLTSVSQLVLK 211


>gi|299770479|ref|YP_003732505.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. DR1]
 gi|298700567|gb|ADI91132.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. DR1]
          Length = 280

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLP 233
              + T    F+ +F+LG +L +  T  ++      + + +  + +PL+    F  F  P
Sbjct: 56  FTMVWTAVIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFP 115

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                 L   L      +    +          +    AL  YTAA ++E +R+G+  V 
Sbjct: 116 E----FLPDSLSAGSGDVVAGGWWKNILNQQPAVIGVFALGLYTAARVSEHIRAGINTVS 171

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +  
Sbjct: 172 RGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 231

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 232 KTMREETSQDIIILILSTPVYLIITYSIKFIMAWIEKRMAV 272



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 3/117 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    ++   +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FR
Sbjct: 40  AHAEAPTWLQMLGSGVFTMVWTAVIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFR 99

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           NIP +V +FF        LP    +     G  +                 +F    
Sbjct: 100 NIPLIVQLFFWAFVFPEFLPDSLSAGS---GDVVAGGWWKNILNQQPAVIGVFALGL 153


>gi|171318959|ref|ZP_02908089.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171095844|gb|EDT40788.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 240

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 8/208 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTF 227
                  LT+   A   + + V G++L++         R     +    +  PLL    F
Sbjct: 11  WLWQGFLLTLGLAAAAALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQLLF 70

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG+ +L+       L+    +      +  +  S EF++ ++ LS YTAAF+AE   +
Sbjct: 71  WYFGVASLLPETWITWLNARHELSMG--PLTLAWPSFEFVAGWVGLSAYTAAFVAEECEA 128

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  QY+NL+KNSSLA+A+G A
Sbjct: 129 GLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFGQYMNLVKNSSLAMAIGVA 188

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +L      +  +T +      +   +Y+
Sbjct: 189 ELSYASRQVETETFKTFAAFGVATVLYV 216



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 62/159 (38%), Gaps = 4/159 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  LA +  + AT+ G L+   R +    V  +   YV  FRN P LV 
Sbjct: 8   YLSWLWQGFLLTLGLAAAAALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--- 201
           + F Y  V S+LP    +  L     L+   L+    + +  A     S      ++   
Sbjct: 68  LLFWYFGVASLLPETWITW-LNARHELSMGPLTLAWPSFEFVAGWVGLSAYTAAFVAEEC 126

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               R  R        AL L  + +     LP  V IAL
Sbjct: 127 EAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165


>gi|172060590|ref|YP_001808242.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171993107|gb|ACB64026.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 240

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 8/185 (4%)

Query: 197 GIVLSLFATRLSRHF------HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           G++L++      R        +    +  PLL    F  FG+ +L+       L+    V
Sbjct: 34  GLLLAVMRHARGRVLRTAAAAYVVAFRNTPLLVQLLFWYFGVASLLPDTWIAWLNARHEV 93

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +  +  S EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++
Sbjct: 94  --SAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQS 151

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+R  +PPL  QY+NL+KNSSLA+A+G A+L      +  +T +      + 
Sbjct: 152 LRYVVLPQAVRIALPPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAFGVA 211

Query: 371 MFIYL 375
             +Y+
Sbjct: 212 TVLYV 216



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 4/159 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  LA +  + AT  G L+   R +  +++      YV  FRN P LV 
Sbjct: 8   YLSWLWQGFLLTLGLAAASAVAATAGGLLLAVMRHARGRVLRTAAAAYVVAFRNTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--- 201
           + F Y  V S+LP    +  L     ++   L+    + +  A     S      ++   
Sbjct: 68  LLFWYFGVASLLPDTWIAW-LNARHEVSAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEEC 126

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               R  R        AL L  + +     LP  V IAL
Sbjct: 127 EAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165


>gi|71735859|ref|YP_274486.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556412|gb|AAZ35623.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320328872|gb|EFW84871.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 225

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 41  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 88  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPF 147

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 148 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 207

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 208 WLVKRYEQH 216



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  +     +   ++  ++   RLS  + + W   VYVEV R I  LV+
Sbjct: 14  IARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|209552183|ref|YP_002284099.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539776|gb|ACI59707.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 216

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 16/207 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I V +  + + L+L    ++ H   +T   + +      +  G+P LV++   Y +
Sbjct: 19  LQVTIGVVAIGISLGLTLALGLVNNHAGIRTFALVAV-----EIFRGIPALVML---YIV 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P            V     S  +AL      F+A++ ++G++A+P GQ EAA ALG
Sbjct: 71  YFGLPQFE--------VVMDAIPSASVALGISMGGFLADVFKAGILAIPLGQREAAAALG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+   A   V+LPQ +R + PP+    ++  + ++LA  +   +L+S   T+     + +
Sbjct: 123 LSRSTAFTRVILPQTIRIVTPPVLGYVISYFQATALAYTIAVPELMSRSYTVAADNFRFL 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E++ +  F+Y  + I  A ++NRL+ +
Sbjct: 183 EVLTMAGFLYAVICIPSARWVNRLSNR 209


>gi|322833012|ref|YP_004213039.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168213|gb|ADW73912.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 217

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 11/174 (6%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
                 +   L+ G P +V + + +           F            ++  +A+   +
Sbjct: 51  WRVTGRLYVSLMRGTPAIVQLFVVF-----------FTLPRLGLGGQPMLAAVLAIGLNS 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AEI+R     V RGQ EAA  LGL        V+ PQ +R+ +P L +++  LLK 
Sbjct: 100 GAYVAEILRVNQSLVTRGQREAARTLGLNRWLTWWYVINPQVIRASLPMLVNEFTILLKT 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + LA  V   +L   G  +I +T  A +++L+    YL +++ +   +  L AK
Sbjct: 160 TPLASVVALTELTYAGQIVIARTYDATQVLLLVSAGYLLIALPLISAVRHLEAK 213


>gi|314938648|ref|ZP_07845928.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|314944092|ref|ZP_07850755.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|314950330|ref|ZP_07853611.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
 gi|314951102|ref|ZP_07854164.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|314992312|ref|ZP_07857746.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|314996123|ref|ZP_07861194.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313589680|gb|EFR68525.1| ABC transporter, permease protein [Enterococcus faecium TX0133a01]
 gi|313593128|gb|EFR71973.1| ABC transporter, permease protein [Enterococcus faecium TX0133B]
 gi|313596736|gb|EFR75581.1| ABC transporter, permease protein [Enterococcus faecium TX0133A]
 gi|313597319|gb|EFR76164.1| ABC transporter, permease protein [Enterococcus faecium TX0133C]
 gi|313642036|gb|EFS06616.1| ABC transporter, permease protein [Enterococcus faecium TX0133a04]
 gi|313643347|gb|EFS07927.1| ABC transporter, permease protein [Enterococcus faecium TX0082]
          Length = 219

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTF 227
           M+      S    ++    +  V++  +G V   L                LPL     F
Sbjct: 1   MYFPLIDFSLMWTSLPFVLQGLVYTLGIGFVSFLLGNLVGLLLTVLGLLDWLPLNVFIRF 60

Query: 228 L---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G+P LVL+ L Y               G         +  I  +  ++AFI EI
Sbjct: 61  YLSFFRGIPALVLLFLLY--------------FGLPYQLSALTASVICFTITSSAFIGEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  ++L+K +SLA  +
Sbjct: 107 YRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++      I  +T     + ++   IY  + I I      L  +
Sbjct: 167 TVPEIFQKAKIIGGRTFDYFSLYILVALIYWVICIGIEKVQQYLEKR 213


>gi|270293189|ref|ZP_06199400.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279168|gb|EFA25014.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 219

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 90/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSVQILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+     L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSRMLAKR 213



 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|320007607|gb|ADW02457.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces flavogriseus ATCC 33331]
          Length = 214

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
             S          ++ V++ +L +VL        R     + + +  ++++      L  
Sbjct: 7   NWSLYGKGFLGTVELTVYASILALVLGFVMASF-RVAPVGSLRVIGTVWVAVLRNTPLTL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L    L     F   +  Q                 +AL CYT+AFI E +RSG+  VP 
Sbjct: 66  LFFAVLLGLPRFGLVLPFQVF-------------AVLALGCYTSAFICEALRSGINTVPT 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LG++  +    V+LPQA RS+IPP+ S  + L KNS++A A    +L+    
Sbjct: 113 GQGEAARSLGMSFGQTLGNVVLPQAFRSVIPPVGSTLIALAKNSAIAGAFSVTELLGTYK 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           T+       I   +     YL +++ I+   N L  +  +  
Sbjct: 173 TLNELGYSIIWTFVWIAVGYLIITLAISALFNVLEKRWGVAR 214



 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     I A ++G ++ + R++    +  I  V+V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASILALVLGFVMASFRVAPVGSLRVIGTVWVAVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|241895818|ref|ZP_04783114.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241870861|gb|EER74612.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 218

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 110/227 (48%), Gaps = 19/227 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        +    +T++      + SF++G +L +       +  +  G          
Sbjct: 8   FSWVNMRFLMMGLGVTIEVAVVSIILSFIIGSILGVIRYVKIPYLSQIVG---------- 57

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F+I  +  L L+ + +  +F  P +G    +          S   AL+ + +  +AEI+R
Sbjct: 58  FIIDLIRNLPLLLIIFFTYFALPKIGIHFGV--------ITSTIFALTIFESTMLAEIIR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG++AVP+GQ+E A++ GL  ++A   ++LPQA + +IPP+ SQ+++L+K++SLA  +  
Sbjct: 110 SGIMAVPKGQLEGALSNGLNFKQALWHIILPQAYKKMIPPIVSQFVSLIKDTSLATIIML 169

Query: 347 ADLVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++      +  Q   A I +      IY  L+ +I+   + L+ ++
Sbjct: 170 PEVTYRAQIVYAQEPSAIISMFFALAVIYFILNFIISKIGDMLDRRM 216



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 44/106 (41%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +++G   T  +A   +I + IIG+++G  R      ++ I    +++ RN+P 
Sbjct: 9   SWVNMRFLMMGLGVTIEVAVVSIILSFIIGSILGVIRYVKIPYLSQIVGFIIDLIRNLPL 68

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           L++IFF Y ++  +           F + +    +    +     A
Sbjct: 69  LLIIFFTYFALPKIGIHFGVITSTIFALTIFESTMLAEIIRSGIMA 114


>gi|227818595|ref|YP_002822566.1| ArtQ, ABC-type arginine transport system, permease component ArtQ
           [Sinorhizobium fredii NGR234]
 gi|36958850|gb|AAQ87275.1| Histidine transport system permease protein hisQ [Sinorhizobium
           fredii NGR234]
 gi|227337594|gb|ACP21813.1| putative ArtQ, ABC-type arginine transport system, permease
           component ArtQ [Sinorhizobium fredii NGR234]
          Length = 240

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 3/212 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I + ++++GI + L A  + +    +  + +  LY  T  I  +P L+LI   Y    
Sbjct: 30  VLISLGAYLVGIAIGL-AGAIGKLKGNRPVRFVLDLY--TTAIRAIPELILIIGLYYAGT 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D            +     F++    L     A++ E+ R  ++A+P GQ+EAA A G+ 
Sbjct: 87  DGLNRILAVLGLPAVEINGFVAAVAVLGIVQGAYMTEVFRGAILAIPVGQIEAAAAFGMR 146

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++LP  M + +P L + ++ + K+S+L   VG+ +L          T      
Sbjct: 147 PSLRFRRIVLPALMPNALPGLANLWMCVTKDSALIAVVGYQELALATRIAAGNTKHYFLF 206

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +YL+++++  +  + L  +    + K
Sbjct: 207 FLASAALYLAITLISNVVFSALETRFRRGQPK 238



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G ++T  ++    +    IG     G+L  N+ V ++  +Y    R IP L++
Sbjct: 18  WGGVLLAGALSTVLISLGAYLVGIAIGLAGAIGKLKGNRPVRFVLDLYTTAIRAIPELIL 77

Query: 145 IFFLYKSVL 153
           I  LY +  
Sbjct: 78  IIGLYYAGT 86


>gi|227551495|ref|ZP_03981544.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257884577|ref|ZP_05664230.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257898521|ref|ZP_05678174.1| amino acid ABC transporter [Enterococcus faecium Com15]
 gi|227179392|gb|EEI60364.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecium TX1330]
 gi|257820415|gb|EEV47563.1| amino acid ABC transporter [Enterococcus faecium 1,231,501]
 gi|257836433|gb|EEV61507.1| amino acid ABC transporter [Enterococcus faecium Com15]
          Length = 219

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTF 227
           M+      S    ++    +  V++  +G V   L                LPL     F
Sbjct: 1   MYFPLIDFSLMWTSLPFVLQGLVYTLGIGFVSFVLGNLVGLLLTVLGLLDWLPLNVFIRF 60

Query: 228 L---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G+P LVL+ L Y               G         +  I  +  ++AFI EI
Sbjct: 61  YLSFFRGIPALVLLFLLY--------------FGLPYQLSALTASVICFTITSSAFIGEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  ++L+K +SLA  +
Sbjct: 107 YRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++      I  +T     + ++   IY  + I I      L  +
Sbjct: 167 TVPEIFQKAKIIGGRTFDYFSLYILVALIYWIICIGIEKVQQYLEKR 213


>gi|212709679|ref|ZP_03317807.1| hypothetical protein PROVALCAL_00727 [Providencia alcalifaciens DSM
           30120]
 gi|212687490|gb|EEB47018.1| hypothetical protein PROVALCAL_00727 [Providencia alcalifaciens DSM
           30120]
          Length = 222

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 92/225 (40%), Gaps = 10/225 (4%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L     ++         +F+L I  +L           KT      + +   L  G P
Sbjct: 7   QILPGLPTSLSLTFSALFVAFILAIFFTLI-------LSLKTPVVSQAVKVYITLFTGTP 59

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV   L Y        L  +  +     +P ++   +AL+  +AA+   +    + A+P
Sbjct: 60  LLVQFFLIYNGPSQFKSLQDYPMLWEFISTP-WICAMVALALNSAAYSTLLFHGAVKAIP 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ ++  ALG+   +    ++LP A +  +   +++ + + K++SLA  +   D++   
Sbjct: 119 SGQWQSCQALGMNKLQTM-RIILPYAFKRSLSSYSNEVVLIFKSTSLASTITMLDIMGYS 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +  QT   +   +    IYL ++ ++ L M  +  K    E++
Sbjct: 178 SQVFGQTWDVM-AFVAAGIIYLVVNAILTLIMRLIERKALAFEQR 221


>gi|290510007|ref|ZP_06549377.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|289776723|gb|EFD84721.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 250

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 2/177 (1%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                +  PLL    F  F    L+ +A+K  ++ +         +   T  PEF+    
Sbjct: 62  WVSLFRNTPLLVQLLFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLT--PEFLCSMW 119

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + +   P+  QY
Sbjct: 120 GLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLANAWQPIVGQY 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           LNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L + + + + RL
Sbjct: 180 LNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAMGVALTRL 236



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ T W++ +G++ AT++  L+ A RL   +    +   +V +FRN P LV +
Sbjct: 16  LQWIISGFLTTVWVSVAGILLATLLAVLLLALRLGGGRAGRGLVTAWVSLFRNTPLLVQL 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL----NNRGLSFPTLTMDTNAKIFVFSFVL 196
            F Y +  ++LP+    +V     +     N   L+   L       +F  +F++
Sbjct: 76  LFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLTPEFLCSMWGLGVFTSAFLV 130


>gi|206578453|ref|YP_002240193.1| putative amino acid ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|206567511|gb|ACI09287.1| putative amino acid ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
          Length = 250

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 2/177 (1%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                +  PLL    F  F    L+ +A+K  ++ +         +   T  PEF+    
Sbjct: 62  WVSLFRNTPLLVQLLFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLT--PEFLCSMW 119

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + +   P+  QY
Sbjct: 120 GLGIFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLANAWQPIVGQY 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           LNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L + + + + RL
Sbjct: 180 LNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAMGVALTRL 236



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ T W++ +G++ AT++  L+ A RL   +    +   +V +FRN P LV +
Sbjct: 16  LQWIISGFLTTVWVSVAGILLATLLAVLLLALRLGGGRAGRGLVAAWVSLFRNTPLLVQL 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL----NNRGLSFPTLTMDTNAKIFVFSFVL 196
            F Y +  ++LP+    +V     +     N   L+   L       IF  +F++
Sbjct: 76  LFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLTPEFLCSMWGLGIFTSAFLV 130


>gi|227818836|ref|YP_002822807.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|36959094|gb|AAQ87519.1| Transporter [Sinorhizobium fredii NGR234]
 gi|227337835|gb|ACP22054.1| probable amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 222

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 13/190 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               ++R    +  +   ++++   ++   P LV I   Y   F  P++       G  +
Sbjct: 40  ILGVVARTSKSEIARTPVIVFVE--VVRNTPFLVQIFFIY---FALPLM-------GIRL 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +P  ++  +AL     A+  EI+R G+ +V RGQ+EA  ALGL      RL++L  A+R+
Sbjct: 88  NPT-VTAILALGINGGAYAIEIIRGGVESVSRGQIEAGFALGLHKADVFRLIVLKPALRA 146

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I P LTSQ++ L   +S+  ++   +L S    I + T ++ E+      IYL +S ++ 
Sbjct: 147 IYPSLTSQFIMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFTVTAIYLVISTLMM 206

Query: 383 LFMNRLNAKI 392
                ++   
Sbjct: 207 GLFALVSRHY 216


>gi|83854939|ref|ZP_00948469.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Sulfitobacter sp. NAS-14.1]
 gi|83842782|gb|EAP81949.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Sulfitobacter sp. NAS-14.1]
          Length = 431

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 19/223 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R +    L M         S  +GI+L+L      R       K + +++I       L 
Sbjct: 219 RNMGGFMLNMILGVICVSLSLPMGILLAL-----GRQSSLPIIKLICVVFIEFIRGVPLI 273

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           T     + + I ++ + +A+IAE++R GL A+P
Sbjct: 274 TLLFVANVVLAYFLPP----------GTNFDLILRVIIMITMFASAYIAEVIRGGLAALP 323

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VS 351
           RGQ EAA +LGL + +A RL++LPQA++  IP + +  + L K+++L   +   DL  + 
Sbjct: 324 RGQYEAADSLGLDYAQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVSIISMFDLVGMI 383

Query: 352 VGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            G  + +    G   E+      ++  +   I+ +   L  ++
Sbjct: 384 RGPILASTDWNGVYWELWGFAALLFFVVCYGISQYSQWLERQL 426


>gi|163745604|ref|ZP_02152964.1| ABC transporter permease protein [Oceanibulbus indolifex HEL-45]
 gi|161382422|gb|EDQ06831.1| ABC transporter permease protein [Oceanibulbus indolifex HEL-45]
          Length = 223

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 15/237 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
               + F + +  R        +     +   +   G +L +    L R +  K  + L 
Sbjct: 2   EIFDIFFNLDVMRRAFPILMRGLVNTILLGFSAIFFGGILGVLVC-LVRLYAAKPFRLLA 60

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +LY   F    +  +VLI + Y L F               V   F++  IAL+   AA+
Sbjct: 61  VLYTDIFRAIPV-LVVLILVYYALPFA------------GIVFSSFVAATIALALVLAAY 107

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE+VR+G+ AVPRGQ EA  ALGL+     R V+LPQA R +IPPL S  + ++K++SL
Sbjct: 108 TAEVVRAGIEAVPRGQFEACDALGLSFATTMRKVILPQAFRMMIPPLASYAVAIMKDTSL 167

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           A  V   DL+               ++L  +   +++   +  F   L        +
Sbjct: 168 ASVVAMDDLLKQATDAQALFANPTPLLLAALLY-IAILWPMVRFTGWLEQHYKRGYR 223



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G VNT  L FS +    I+G LV   RL A K    +  +Y ++FR IP LVV+  +
Sbjct: 20  LMRGLVNTILLGFSAIFFGGILGVLVCLVRLYAAKPFRLLAVLYTDIFRAIPVLVVLILV 79

Query: 149 YKSVL 153
           Y ++ 
Sbjct: 80  YYALP 84


>gi|163747480|ref|ZP_02154831.1| ABC transporter, membrane spanning protein (amino acid)
           [Oceanibulbus indolifex HEL-45]
 gi|161379236|gb|EDQ03654.1| ABC transporter, membrane spanning protein (amino acid)
           [Oceanibulbus indolifex HEL-45]
          Length = 217

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 14/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L F          +  F+ V G +L LF   L          ALPL ++ 
Sbjct: 1   MFDTALTFNDLMFMLKGAGVTLSVTAFAVVGGTLLGLFFGVL--RSQISPWAALPLTFV- 57

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +   +P L+ + L             F  I G  +SP F++  I L+ YT+A+  EIV
Sbjct: 58  LDIFRSVPLLIQLILA----------NAFQAIAGWGISP-FVTSCIVLALYTSAYCTEIV 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  + AVP     AA +LG+T  +    ++ P A+R  +P      L ++K+S+L + +G
Sbjct: 107 RGAIEAVPSVTRRAARSLGMTWGQDLTQIVFPMALRVGLPSWIGLTLGVMKDSALVMWLG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+     ++ +  + + I+L+   IY +LS  IA   +RL  +
Sbjct: 167 IIELLRSSQILVTRLQEPMFILLVTGAIYFALSFPIARLGSRLEKR 212


>gi|257880921|ref|ZP_05660574.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|294620773|ref|ZP_06699979.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium U0317]
 gi|257816579|gb|EEV43907.1| amino acid ABC transporter [Enterococcus faecium 1,231,502]
 gi|291599630|gb|EFF30641.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium U0317]
          Length = 220

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTF 227
           M+      S    ++    +  V++  +G V   L                LPL     F
Sbjct: 2   MYFPLIDFSLMWTSLPFVLQGLVYTLGIGFVSFLLGNLVGLLLTVLGLLDWLPLNVFIRF 61

Query: 228 L---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G+P LVL+ L Y               G         +  I  +  ++AFI EI
Sbjct: 62  YLSFFRGIPALVLLFLLY--------------FGLPYQLSALTASVICFTITSSAFIGEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  ++L+K +SLA  +
Sbjct: 108 YRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++      I  +T     + ++   IY  + I I      L  +
Sbjct: 168 TVPEIFQKAKIIGGRTFDYFSLYILVALIYWVICIGIEKVQQYLEKR 214


>gi|329296933|ref|ZP_08254269.1| polar amino acid ABC transporter inner membrane subunit [Plautia
           stali symbiont]
          Length = 199

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 11/184 (5%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +     K G A  L  I   LI   P +V +   + + F  P L      G         
Sbjct: 20  AALRSGKPGWASRLWGIYVELIRNTPFVVQL---FFIVFGLPNLRLKLTAGE-------- 68

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  +A+     A+  EI+R+G+  +PRGQ EA   LGL+  +    V+LP +++ I P L
Sbjct: 69  AALLAMLINLGAYSTEIIRAGIQVMPRGQWEAGRVLGLSRTQTFIRVVLPPSLQRIYPAL 128

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            SQ + ++  SS+   V + +L      I ++T  + E+ L+   IYL+LSI +   +  
Sbjct: 129 ISQCIIVMLGSSVVSQVSYEELTFAANLIQSRTFLSFEVYLVTTLIYLALSIAMRQLLLT 188

Query: 388 LNAK 391
           L  K
Sbjct: 189 LGRK 192


>gi|255263364|ref|ZP_05342706.1| glutamine ABC transporter permease protein [Thalassiobium sp.
           R2A62]
 gi|255105699|gb|EET48373.1| glutamine ABC transporter permease protein [Thalassiobium sp.
           R2A62]
          Length = 277

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 100/246 (40%), Gaps = 6/246 (2%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             ++ +++ ++P+      +    F  +         +D              ++++   
Sbjct: 32  LAVFAAIVLLVPMAPGWAKVKKSFFNWDVFTKTFPKLLDAFLIDIAIFAWCAPLIAIVGL 91

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            ++     ++    PL  I          + +I   Y + F  P LG          +  
Sbjct: 92  LVALARDVRSPALFPLRIIGAAYTDIFRGVPVILTVYLIGFGIPGLGL-----PRPYNSP 146

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++   +AL    +A++AEI RSG+ +V + Q  A+ +LGL+ R     V+LPQA+R +IP
Sbjct: 147 YIWGSLALILTYSAYVAEIFRSGIDSVHKSQRAASESLGLSDRDTMWFVILPQAIRHVIP 206

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              + ++ L K+ +L   +G  ++    G +           +    I+L++++    + 
Sbjct: 207 AQMNMFIALQKDVALLSFIGPVEIFRQAG-VQKSLLANFTPYVGAALIFLAITVPATRYA 265

Query: 386 NRLNAK 391
           + L  K
Sbjct: 266 DYLMNK 271


>gi|304437586|ref|ZP_07397541.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369399|gb|EFM23069.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 232

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 2/233 (0%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   +                   +   S VL    + F   + R    + G  +  LY+
Sbjct: 1   MELDLDFMQETFLLIWQGAGVTLSLTALSLVLAAPPA-FCFAVLRVRGHRVGGTIARLYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV-SPEFMSLYIALSCYTAAFIAE 283
           S      L   +L+           ++               F       +  T A + E
Sbjct: 60  SFVRGTPLVLQILLLYSLLPSLLNLLVKAAGSSFNVFEAVDPFWYAVFIFTLNTIALLTE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
             RS L+A+P+GQ+EA    GL+  +    V+LPQA+   +P + +  +NL+K +SLA  
Sbjct: 120 AFRSALLAIPKGQLEAGAVCGLSEAETYLHVILPQALVVALPSIANITVNLIKGTSLAFL 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   D+++VG    +     IE  L    +YL L  ++ L       ++    
Sbjct: 180 MTVKDIMAVGKVAASYGYNYIEAYLDVFIVYLILCTIVQLLFAAAERRVGAFR 232


>gi|149010669|ref|ZP_01832040.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|303255871|ref|ZP_07341912.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|303259974|ref|ZP_07345948.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303261380|ref|ZP_07347328.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264047|ref|ZP_07349968.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303266939|ref|ZP_07352815.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303269237|ref|ZP_07355013.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|147765150|gb|EDK72079.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|301801565|emb|CBW34260.1| amino-acid ABC transporter integral membrane protein [Streptococcus
           pneumoniae INV200]
 gi|302597255|gb|EFL64360.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|302637514|gb|EFL68001.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638893|gb|EFL69354.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302641244|gb|EFL71615.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302643513|gb|EFL73784.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646452|gb|EFL76678.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
          Length = 225

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIGISILSVLLSMMFGTVMGIIM-----TSHSRIIRFLTRLYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S+ I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSVIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTTSFWIYGTILILYFAVCYPISKLSTHLEKH 222



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + + GT++G    S ++++ ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMMFGTVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|284044553|ref|YP_003394893.1| polar amino acid ABC transporter inner membrane subunit
           [Conexibacter woesei DSM 14684]
 gi|283948774|gb|ADB51518.1| polar amino acid ABC transporter, inner membrane subunit
           [Conexibacter woesei DSM 14684]
          Length = 279

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 9/248 (3%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           VV+      ++   P         F                  + K+F+    + +VL L
Sbjct: 28  VVVIGGLAVLVGTSPGWPDVRETFFSWEAFKTSFPDVLRGFWLDVKLFLIVEAIVLVLGL 87

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
            A  L R          P+  +       L  +  I L Y + F  P L     + G   
Sbjct: 88  -AIALGRTTQAPAL--FPVRLLLAVYTDVLRGIPTILLVYLVGFGIPALA----LNGLPT 140

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P  +    AL    +A++AE+ R+GL +V   Q  AA+A+GL   +A R V+LPQA+R 
Sbjct: 141 DPVVLGGA-ALVLTYSAYVAEVYRAGLDSVHPSQRAAALAVGLNRVQALRFVVLPQAVRR 199

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPPL + +++L K+ +L   +G  +   V     +        ++    +Y+ +++ +A
Sbjct: 200 VIPPLLNDFISLQKDVALISVLGPLEAFRVAQIEASSNFNYTP-LIAAALLYICVTVPLA 258

Query: 383 LFMNRLNA 390
            F++R+  
Sbjct: 259 RFVDRMQK 266


>gi|126667701|ref|ZP_01738669.1| amino acid ABC transporter [Marinobacter sp. ELB17]
 gi|126627804|gb|EAZ98433.1| amino acid ABC transporter [Marinobacter sp. ELB17]
          Length = 217

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 83/200 (41%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ +               G  + ++ I    +   P    I L         +   +  
Sbjct: 18  GLGVGSLVAVAVAFLSVVGGLVVAVISIYINKVVSWPLRFFIWLFMTTPLLLQLYFLYFG 77

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +G   + P  +   + L  +  A+ A+I  + + +V  GQ EA+ ++G  H      +++
Sbjct: 78  LGEWILIPAILVGILGLGFHYMAYNADIFIATIKSVSGGQYEASRSIGFGHVATIFYIIV 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA    IP L +  + ++K++S+  A+G A+LV      I+ T +  E  ++   +Y  
Sbjct: 138 PQAFIRAIPQLGNNMILMVKDTSVLSAIGVAELVHASQYAISVTFRPFEFFIVIALLYYV 197

Query: 377 LSIMIALFMNRLNAKIALKE 396
           ++I + L    L  + A + 
Sbjct: 198 INIFMELGQAWLERQTAYRR 217


>gi|254252392|ref|ZP_04945710.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
 gi|124895001|gb|EAY68881.1| ABC-type amino acid transport system permease component
           [Burkholderia dolosa AUO158]
          Length = 309

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 4/239 (1%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R    +  +F    S L         +   +  +L +  L    L + +         +L
Sbjct: 47  RGRATIAALFRFVPSALRRAHSSMLGLAPKYLSWLWHGFLLTLGLAVASALAATAGGLLL 106

Query: 197 GIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            ++      A R     +    +  PLL    F  FG+ +L+       L  +       
Sbjct: 107 AVLRHARGAAPRAIASAYVVAFRNTPLLVQLLFWYFGVASLLPDTWIAWL--NARHDASI 164

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             +  +  S EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALG T  ++ R V
Sbjct: 165 GPVTLAWPSFEFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGFTPMQSLRYV 224

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +LPQA+R  +PPL  QY+NL+KNSSLA+A+G A+L      +  +T +      +   +
Sbjct: 225 VLPQAVRIALPPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAFGVATVL 283



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 36/79 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  LA +  + AT  G L+   R +       I   YV  FRN P LV 
Sbjct: 77  YLSWLWHGFLLTLGLAVASALAATAGGLLLAVLRHARGAAPRAIASAYVVAFRNTPLLVQ 136

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V S+LP    + 
Sbjct: 137 LLFWYFGVASLLPDTWIAW 155


>gi|83721079|ref|YP_442969.1| amino acid ABC transporter permease [Burkholderia thailandensis
           E264]
 gi|83654904|gb|ABC38967.1| amino acid ABC transporter, permease protein [Burkholderia
           thailandensis E264]
          Length = 247

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 22/199 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V    LG+ L+L    L        G                  + ++ L +  +F  PV
Sbjct: 42  VLGVALGVALALATGALRGALIVVIG--------------FFRAIPVLMLIFWTYFLLPV 87

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L   +        P   ++  ALS    A++A  V +G+ A   GQ +A ++LGLT R+ 
Sbjct: 88  LLHADV-------PGLAAVVCALSLVGGAYLAHSVHAGIRAAGDGQRQAGLSLGLTRRQT 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            R VLLPQA+R + P   +Q+++L+K++SLA  VG  +L  V   + N+      +I L 
Sbjct: 141 VRYVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVGVPELSFVATQVNNRLMVYPAQIFLF 200

Query: 370 WMFIYLSLSIMIALFMNRL 388
              IYL L   + +    L
Sbjct: 201 VGVIYLILCTALDVAATWL 219


>gi|57242452|ref|ZP_00370390.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           upsaliensis RM3195]
 gi|57016737|gb|EAL53520.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           upsaliensis RM3195]
          Length = 233

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 12/237 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTG 216
           +   F +      +    LT+  +    VFS ++G    L      +        + +  
Sbjct: 1   MDFHFILTHIPAFVEAAWLTLKLSFWGVVFSLIIGFFCVLMHFFKLKFMGNLCQIYIEFS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL + LP L      + L    P L         ++ P F    + LS  
Sbjct: 61  RNTPLLIQLFFLYYALPKL-----GFHLETIFP-LNLLCLSVDESLRPAFACAIVGLSFL 114

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A++AE +R+G  +V + Q EA ++LG +     R V+LPQA+   +  +++  + L+K
Sbjct: 115 GGAYMAEALRAGFESVKKQQFEAGLSLGFSAFGNLRYVILPQALAVAMSGISANIIFLIK 174

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +S+   +   DLV++  ++ + T +  E++ +    YL L + ++L ++ L  ++ 
Sbjct: 175 ETSVVSIIALPDLVTLMKSLNSLTYKTDELLFMLFMGYLCLILPLSLILSWLEKRLR 231



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 39/83 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++  A +     T  L+F G++ + IIG           K +  +C++Y+E  RN P L+
Sbjct: 8   THIPAFVEAAWLTLKLSFWGVVFSLIIGFFCVLMHFFKLKFMGNLCQIYIEFSRNTPLLI 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLP 166
            +FFLY ++  +    +    L 
Sbjct: 68  QLFFLYYALPKLGFHLETIFPLN 90


>gi|53719421|ref|YP_108407.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|124385114|ref|YP_001026325.1| general L-amino acid transport system permease protein aapQ
           [Burkholderia mallei NCTC 10229]
 gi|126438631|ref|YP_001058920.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 668]
 gi|126450446|ref|YP_001080401.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei NCTC 10247]
 gi|126452880|ref|YP_001066163.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease
           [Burkholderia pseudomallei 1106a]
 gi|167815881|ref|ZP_02447561.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 91]
 gi|167824251|ref|ZP_02455722.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 9]
 gi|167902771|ref|ZP_02489976.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei NCTC 13177]
 gi|167911016|ref|ZP_02498107.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 112]
 gi|237812177|ref|YP_002896628.1| general L-amino acid transport system permease protein AapQ
           [Burkholderia pseudomallei MSHR346]
 gi|242316618|ref|ZP_04815634.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
 gi|254179863|ref|ZP_04886462.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|254188733|ref|ZP_04895244.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|52209835|emb|CAH35807.1| putative amino acid transport system, membrane protein
           [Burkholderia pseudomallei K96243]
 gi|124293134|gb|ABN02403.1| general L-amino acid transport system permease protein aapQ
           [Burkholderia mallei NCTC 10229]
 gi|126218124|gb|ABN81630.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 668]
 gi|126226522|gb|ABN90062.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106a]
 gi|126243316|gb|ABO06409.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia mallei NCTC 10247]
 gi|157936412|gb|EDO92082.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pasteur 52237]
 gi|184210403|gb|EDU07446.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1655]
 gi|237504603|gb|ACQ96921.1| general L-amino acid transport system permease protein AapQ
           [Burkholderia pseudomallei MSHR346]
 gi|242139857|gb|EES26259.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 1106b]
          Length = 241

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 4/218 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKTG 216
            D  +   + M+L    L    L++       +  F L I       + R +   +    
Sbjct: 1   MDAWLAPKYLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS Y
Sbjct: 61  RNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLALRWPSFEFVAGWLGLSGY 118

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+K
Sbjct: 119 TSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLIK 178

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           NSSL +A+G A+L      +  +T +      +   +Y
Sbjct: 179 NSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLY 216



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 9   YLMWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 69  LLFWYFGVAALLPEPAMAW 87


>gi|302554579|ref|ZP_07306921.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472197|gb|EFL35290.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
          Length = 298

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 60/274 (21%), Positives = 116/274 (42%), Gaps = 17/274 (6%)

Query: 126 AWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
                + V        L+   +        L               +         T+  
Sbjct: 15  RRNVVLTVIFLVATAALLWWVYKALKDKGQLEWALWEPFFSGTEAWSTYIWPGLQNTLKA 74

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
            A   + +  LG VL +   RLS H   +   A+ + +        +P LVL+     L 
Sbjct: 75  AALAVIIALPLGAVLGIA--RLSDHAWVRVPAAVVVEF-----FRSIPVLVLMIFGLALF 127

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                     +   S+      ++   L  Y A+ +AEIVR+G++++P+GQ EAA A+GL
Sbjct: 128 AQ--------YTNVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPQGQGEAAKAIGL 179

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTG-QA 363
              +  RL+LLPQA+ +++P + SQ + ++K+++L    + +++L+S   T+    G   
Sbjct: 180 RKGQLMRLILLPQAVTAMLPAIVSQLVVIVKDTALGGAVLTYSELLSSANTMSGYYGANV 239

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I    +   I+++L+  +  F + L  ++   +K
Sbjct: 240 IASFTVVAVIFIALNFALTSFASWLERRLRRAKK 273



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 21/156 (13%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N+ + +I  +    +  W                    L ++   
Sbjct: 2   SSVLYDAQGPRAKRRNVVLTVIFLVATAALLWWV----------------YKALKDKGQL 45

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E       ++   +++T I  G  NT   A   +I A  +G ++G  RLS +  V     
Sbjct: 46  EWALWEPFFSGTEAWSTYIWPGLQNTLKAAALAVIIALPLGAVLGIARLSDHAWVRVPAA 105

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           V VE FR+IP LV++ F          +      L 
Sbjct: 106 VVVEFFRSIPVLVLMIFGLALFAQYTNVSSDDRPLY 141


>gi|237650052|ref|ZP_04524304.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CCRI 1974]
 gi|237822719|ref|ZP_04598564.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CCRI 1974M2]
          Length = 226

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +    V+LPQA    +P  ++  + L+K +S+  AV   DL+ V   +I    + 
Sbjct: 124 GLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALTDLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRLR 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|183603450|ref|ZP_02717005.2| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|183576997|gb|EDT97525.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
          Length = 418

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 18/214 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y
Sbjct: 1   MHIAVWGILGSFLLGLIVSII-----RHYRILVLAQVATAYIE--LSRNTPLLIQLFFLY 53

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F       V    +   + L     +++AE  RSGL A+ + Q E  +A
Sbjct: 54  -----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLA 102

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    +
Sbjct: 103 IGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYE 162

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               + + +  YL + + I+L  + +  ++ +++
Sbjct: 163 TDIALAMLVVAYLIMLLPISLVFSWIERRLPMQD 196



 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 22/256 (8%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L+ I  ++  +   LP+ D  I + F      R L    +T+  +    + S + G V+
Sbjct: 177 MLLPISLVFSWIERRLPMQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFGTVM 236

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +         H +  + L  LY+    I        + L + ++F        N  G  
Sbjct: 237 GIIM-----TSHSRIIRFLTRLYLEFIRIMP-----QLVLLFIVYFGLARNFNINISGE- 285

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                  S  I  + +  A + ++VR  + ++P+ Q E+  +LGLT+ +    +++PQ +
Sbjct: 286 ------TSAIIVFTLWGTAEMGDLVRGAITSLPKHQFESGQSLGLTNVQLYYHIIIPQVL 339

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYL 375
           R ++P   +    ++K +SL V +G  ++  VG  II+     I      I    + +Y 
Sbjct: 340 RRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILVLYF 399

Query: 376 SLSIMIALFMNRLNAK 391
           ++   I+     L   
Sbjct: 400 AVCYPISKLSTHLEKH 415



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +SL   ++  R    +    +      +    IL G   T  ++   ++ + + GT++G 
Sbjct: 181 ISLVFSWIERR--LPMQDSGIQVLFQGNNLLRILQGLGVTIGISILSVLLSMMFGTVMGI 238

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
              S ++++ ++ R+Y+E  R +P LV++F +Y  +    
Sbjct: 239 IMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIVYFGLARNF 278



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 38/91 (41%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ + ++G +V   R     ++A +   Y+E+ RN P L+ +FFLY  +  +  +
Sbjct: 3   IAVWGILGSFLLGLIVSIIRHYRILVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV 62

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
               +    G+          +      A  
Sbjct: 63  LSSEVCATLGLVFLGGSYMAESFRSGLEAIS 93


>gi|306829072|ref|ZP_07462262.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304428158|gb|EFM31248.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 219

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 90/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+     L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSRMLAKR 213



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|152968870|ref|YP_001333979.1| glutamate/aspartate ABC transporter membrane protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|262042355|ref|ZP_06015517.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|330006745|ref|ZP_08305699.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150953719|gb|ABR75749.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|259040263|gb|EEW41372.1| glutamate/aspartate ABC superfamily ATP binding cassette
           transporter, membrane protein [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328535746|gb|EGF62186.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 247

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                +  PLL    F  F    L+ +A+K  ++ +         +   T  PEF+    
Sbjct: 59  WVSLFRNTPLLVQLLFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLT--PEFLCSMW 116

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + +   P+  QY
Sbjct: 117 GLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLANAWQPIVGQY 176

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL--N 389
           LNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L + + + + RL   
Sbjct: 177 LNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAMGVALTRLGPG 236

Query: 390 AKIALKEKK 398
            K+    + 
Sbjct: 237 RKLQRSARH 245



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ T W++ +G++ AT++  L+ A RL   +    +   +V +FRN P LV +
Sbjct: 13  LQWIISGFLTTVWVSVAGILLATLLAVLLLALRLGGGRAGRGLVAAWVSLFRNTPLLVQL 72

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL----NNRGLSFPTLTMDTNAKIFVFSFVL 196
            F Y +  ++LP+    +V     +     N   L+   L       +F  +F++
Sbjct: 73  LFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLTPEFLCSMWGLGVFTSAFLV 127


>gi|322411895|gb|EFY02803.1| Amino acid ABC transporter, permease protein [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 213

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + + S  LG +L+            K  +   +LY+  +++ G P L
Sbjct: 12  LDGALVTLQVFFIVIILSIPLGAILAFLM-----KIPFKPLQWFLILYV--WMMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+ A+P+G
Sbjct: 65  LQLIFFYYV-----------LPSFGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAIPKG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L   +  R ++LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLKPLQTIRYIILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +   ++  + 
Sbjct: 174 AANRDA-TLAPMFIAGLIYLLLIGLVTIISKQVEKRF 209



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 34/100 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  +I +  +G ++        K + W   +YV + R  P L+ + F 
Sbjct: 11  LLDGALVTLQVFFIVIILSIPLGAILAFLMKIPFKPLQWFLILYVWMMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           Y  + S     D          LN              A 
Sbjct: 71  YYVLPSFGISFDRMPAAILAFTLNYAAYFAEIFRGGIEAI 110


>gi|322376964|ref|ZP_08051457.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321282771|gb|EFX59778.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 226

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVIAYLIMLLPISLVFSWIERRLR 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 44/111 (39%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEA 111


>gi|309779618|ref|ZP_07674377.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|308921559|gb|EFP67197.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 248

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 4/234 (1%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
               L +G                 +  + + + VL +V  +   RL    H++  + L 
Sbjct: 2   RHAGLDYGFLAEAYERHALLQGAKVSLLVMLSTVVLSLVFGVGLARLLVSPHKRV-RWLA 60

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             +I        PTLV +   + +           +   + ++P F ++ + LS + AAF
Sbjct: 61  QGFIELT--RNTPTLVQLCCAFLVVNTLITQTLSQWQLTNPLTPFFWAVTL-LSLHKAAF 117

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE +R+G+ AVP   +EAA +LG + R+    V LP A+R+  P L +  + L+K SSL
Sbjct: 118 HAEALRAGIEAVPPAMLEAATSLGFSARERLWRVQLPLALRAAWPSLMNNTVELVKASSL 177

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A A+   DL      I  Q    +E +++ +  Y  ++  +      +  ++ +
Sbjct: 178 ASAIAVGDLTYSALMIWTQRDNVLECMVLLLLFYGVVTYAVHALGVWIEGRLRM 231



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 5/154 (3%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L G   +  +  S ++ + + G  +    +S +K V W+ + ++E+ RN P LV +  
Sbjct: 19  ALLQGAKVSLLVMLSTVVLSLVFGVGLARLLVSPHKRVRWLAQGFIELTRNTPTLVQLCC 78

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            +  V +++        L   +      ++  +L         + + +  +  ++     
Sbjct: 79  AFLVVNTLITQTLSQWQLTNPLTPFFWAVTLLSLHKAAFHAEALRAGIEAVPPAMLEAAT 138

Query: 208 S-----RHFHEKTGKALPLLYISTFLIFGLPTLV 236
           S     R    +    L L      L+     LV
Sbjct: 139 SLGFSARERLWRVQLPLALRAAWPSLMNNTVELV 172


>gi|225378343|ref|ZP_03755564.1| hypothetical protein ROSEINA2194_04004 [Roseburia inulinivorans DSM
           16841]
 gi|225209780|gb|EEG92134.1| hypothetical protein ROSEINA2194_04004 [Roseburia inulinivorans DSM
           16841]
          Length = 226

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 94/229 (41%), Gaps = 16/229 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYI 224
           G  LN   +       +  A + +   +LGIV ++   F     +++     + +  +YI
Sbjct: 5   GNILNWEFILKYLPMYEKAAWLTLRIGLLGIVFAIIVGFVCSTIQYYKVPVLRQIVAVYI 64

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P LV +   Y                    +         L+    +++AE 
Sbjct: 65  E--LSRNTPLLVQLFFIYY-----------GLPKIGIQTNAEACGVAGLAFLGGSYMAEA 111

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSGL A+   Q E+A +LG+   +  R ++LPQAM   +P   +  + LLK +S+  A+
Sbjct: 112 FRSGLEAIEPIQTESAYSLGMNRCQTMRYIILPQAMSISVPAFVANVIFLLKETSVFSAI 171

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              DL+     +I    +  E + + +  YL L + I++  + L  ++ 
Sbjct: 172 SLMDLMFTAKDLIGLYYKTTESLFLLVVFYLILLLPISILGSLLERRLR 220



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 35/93 (37%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +   G++ A I+G +    +     ++  I  VY+E+ RN P LV +FF+Y  +  +
Sbjct: 27  TLRIGLLGIVFAIIVGFVCSTIQYYKVPVLRQIVAVYIELSRNTPLLVQLFFIYYGLPKI 86

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
               +       G+                 A 
Sbjct: 87  GIQTNAEACGVAGLAFLGGSYMAEAFRSGLEAI 119


>gi|222106141|ref|YP_002546932.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221737320|gb|ACM38216.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 229

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 9/230 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                             + V S VLG V+++     ++       + L   Y + F   
Sbjct: 5   WIGNYWPLLLTGAWQTLALLVISVVLGFVMAIGL-AFAQVSGGPVTRVLARGYSTFF--R 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVR 286
           G P L+ + L Y  +    +L     I  S + P     F    ++ +   AA+ AE++R
Sbjct: 62  GTPLLIQLWLLY--YGVGSLLPMIPGIRQSLIWPLLREGFFFAAVSFTLNYAAYEAEVLR 119

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L+AVP+G++EA  A G+      R V LP+A+R  +P +  + +  LK + LA  V  
Sbjct: 120 GALLAVPKGELEAGRAFGMGRFTLIRRVWLPRAIRIALPTIAGEVVMQLKATPLAFTVTV 179

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            DL +V   +   T    E +++    YL+++ +IA     + A++ ++ 
Sbjct: 180 MDLYAVAYKVRQDTLLVYEPLIVVTLFYLAITAIIARCFRMVEAQVPIRR 229



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++   +Y   +L G   T  L    ++   ++   +   ++S   +   + R Y   F
Sbjct: 1   MDFSWIGNYWPLLLTGAWQTLALLVISVVLGFVMAIGLAFAQVSGGPVTRVLARGYSTFF 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPD 160
           R  P L+ ++ LY  V S+LP+  
Sbjct: 61  RGTPLLIQLWLLYYGVGSLLPMIP 84


>gi|124384742|ref|YP_001026324.1| glutamine ABC transporter [Burkholderia mallei NCTC 10229]
 gi|126451385|ref|YP_001080402.1| amino acid ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|254358531|ref|ZP_04974804.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia mallei 2002721280]
 gi|124292762|gb|ABN02031.1| glutamine ABC transporter [Burkholderia mallei NCTC 10229]
 gi|126244255|gb|ABO07348.1| amino acid ABC transporter, permease protein [Burkholderia mallei
           NCTC 10247]
 gi|148027658|gb|EDK85679.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia mallei 2002721280]
          Length = 247

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  AL     A++A  V
Sbjct: 63  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALLLVGGAYLAHSV 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A +ALGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 116 HAGIRAAGDGQWQAGLALGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 175

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 176 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 212


>gi|116628271|ref|YP_820890.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101548|gb|ABJ66694.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 226

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+V+S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 22  HIAVMGIIGSFLLGLVVSVI-----RHYRVPILSQLSTAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V        + L     +++AE  RSGL AV + Q E  +++
Sbjct: 74  ----------FGLPRIGLVLSSETCAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   ++    + 
Sbjct: 124 GLTPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLMGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DVALGMLVVAYLLMLLPISLVFSWIERRLR 213



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G+I + ++G +V   R     +++ +   Y+E+ 
Sbjct: 1   MDWSIVQQYLPFYQKAFFLTLHIAVMGIIGSFLLGLVVSVIRHYRVPILSQLSTAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +         G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGLVLSSETCAVVGLIFLGGSYMAESFRSGLEA 111


>gi|39938942|ref|NP_950708.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39722051|dbj|BAD04541.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 597

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 84/228 (36%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                + +      + T   + + S ++G +L++  T +     +       ++ I   L
Sbjct: 370 FIQAQKTIPSYLKGLKTTLILAIDSLIVGFLLAIICTLIKNIKLDYHKNNFLIVAIIKIL 429

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              +  L  +     +      +                +    L   + A I  I+   
Sbjct: 430 NTSINALFFVLKGIPVAAQAMFIYYSITFLFKGNFNPLHAGIFVLILNSLASITMILMQN 489

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  + +GQ+EAA +LG+  ++    ++ PQ ++  +P +  Q +  +K+SS    +G A+
Sbjct: 490 IKFLDKGQIEAAHSLGMNQKQVFLSIVFPQTLKRSVPFILQQLITNIKDSSFFAIIGVAE 549

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L     + +  T   I   ++    YL +  M       L   I LK+
Sbjct: 550 LSWKAQSNMGATLNPILPFVMISCFYLIIISMTGFLSKMLEKNIKLKK 597


>gi|306825706|ref|ZP_07459045.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432067|gb|EFM35044.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 219

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY   +  I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFIFNFAISSLSHMLAKR 213



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|195978013|ref|YP_002123257.1| amino acid ABC transporter membrane-spanning permease
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
 gi|195974718|gb|ACG62244.1| amino acid ABC transporter membrane-spanning permease
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 209

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + V S  LG +L+            K  + L  LYI  +++ G P L
Sbjct: 8   LDGALITLQVFFIVIVLSIPLGALLAFLT-----RVDFKPLQWLLTLYI--WVMRGTPLL 60

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+  +P G
Sbjct: 61  LQLIFFYYV-----------LPSVGVTFDRMPAAILAFTLNYAAYFAEIFRGGIETIPNG 109

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L+  +  R V+LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 110 QYEAAKVLKLSPVQTVRYVILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 169

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +   ++  + 
Sbjct: 170 AANRDA-TLAPMFIAGLIYLLLIGLVTILSKQVEKRF 205



 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  ++ +  +G L+        K + W+  +Y+ V R  P L+ + F 
Sbjct: 7   LLDGALITLQVFFIVIVLSIPLGALLAFLTRVDFKPLQWLLTLYIWVMRGTPLLLQLIFF 66

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV    D          LN 
Sbjct: 67  YYVLPSVGVTFDRMPAAILAFTLNY 91


>gi|328956551|ref|YP_004373937.1| glutamine transport system permease protein GlnP [Carnobacterium
           sp. 17-4]
 gi|328672875|gb|AEB28921.1| glutamine transport system permease protein GlnP [Carnobacterium
           sp. 17-4]
          Length = 219

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 25/208 (12%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S V G +L L      R++ +K    +   YI  F                   
Sbjct: 29  LCVVILSIVFGTLLGLI-----RNYEKKFFGKIAGFYIELFR--------------NTPL 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +LG    I GST+    +   IAL  YTAA +AEIVR GL ++P+GQ EAA + G +
Sbjct: 70  LLWMLGCAFLIPGSTI---LVKASIALFLYTAAVVAEIVRGGLNSIPKGQFEAAHSQGFS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQA 363
             +    ++LPQ  + IIP L SQ +  +K++S    +G  +    G  I   + +T + 
Sbjct: 127 FFQTLVYIILPQTFKKIIPSLLSQVITTIKDTSFLAGLGIMEFTRSGQVILGKVTKTSEV 186

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
             I      +Y  +   +++ +   + K
Sbjct: 187 FLIYGFLAVVYFIICFALSVLVRNWHKK 214



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 34/78 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +I + + GTL+G  R    K    I   Y+E+FRN P L+ +   
Sbjct: 17  LLDGLKTTLLISLCVVILSIVFGTLLGLIRNYEKKFFGKIAGFYIELFRNTPLLLWMLGC 76

Query: 149 YKSVLSVLPIPDHSIVLP 166
              +     +   SI L 
Sbjct: 77  AFLIPGSTILVKASIALF 94


>gi|169833411|ref|YP_001694086.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168995913|gb|ACA36525.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 219

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSDQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|163733599|ref|ZP_02141042.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           litoralis Och 149]
 gi|161393387|gb|EDQ17713.1| glutamine ABC transporter, permease protein, putative [Roseobacter
           litoralis Och 149]
          Length = 270

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 103/250 (41%), Gaps = 11/250 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV++  +    L+       +      +F            +D     +    +LG+ L+
Sbjct: 26  LVLVAMILLVPLAPGWQAVKASFFDAAVFAETFPTLLQAFMIDVMIFAWSVPLILGLGLA 85

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +   R +R       +    +Y+  F    +     I   Y + F  P LG         
Sbjct: 86  IALARGARAPALFPLRIFGAVYVDVFRGVPV-----ILTIYLIGFGIPGLGL-----PRP 135

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
            +  ++   +AL    +A++AE++RSG+ +V   Q  AAI LGL+ R   R V+LPQA+R
Sbjct: 136 WNSPYIWGTVALVLTYSAYVAEVLRSGIESVHASQRNAAICLGLSERDTMRYVVLPQAIR 195

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P   +  + L K+ +L   +G  +++   G I           L+   I+L +++  
Sbjct: 196 RVVPANMNMLVALQKDVALLSFIGPVEILRQAG-IYKSLLANFTPYLVAAVIFLMVTVPA 254

Query: 382 ALFMNRLNAK 391
             + + L  +
Sbjct: 255 TRYADYLLNR 264


>gi|77465462|ref|YP_354965.1| ABC polar amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389880|gb|ABA81064.1| ABC polar amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
          Length = 221

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 15/235 (6%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
               I L F + +  + L      +    ++      LG+V  LF   L    H +  + 
Sbjct: 1   MQDFIRLFFNLEVMAQTLPLLMQGLWMTVRLCAAVIALGLVGGLFL-ALGALSHRRWLRW 59

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
            P   +  FL    P ++LI +   L F    +              F ++ +A     +
Sbjct: 60  -PAFAVIDFLRALPPLVLLIFIYSGLPFAGLAI------------SPFAAVAVAFFLNNS 106

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI R+G+ +VP GQ EAA A GLT  +    V+LPQA+R+++P L S  + ++K +
Sbjct: 107 AYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHVVLPQAVRNVLPDLLSNTVEVVKLT 166

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           SLA  V  A+L+       + T  A  ++L  +   L L   +   ++R   ++A
Sbjct: 167 SLASVVSLAELLYSANMARSLTYNASPLVLAALVY-LVLLWPLVRLVSRYQRRLA 220



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  L  + +    + G  +  G LS  + + W     ++  R +PPLV++ F+
Sbjct: 21  LMQGLWMTVRLCAAVIALGLVGGLFLALGALSHRRWLRWPAFAVIDFLRALPPLVLLIFI 80

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +            +    FLNN             +
Sbjct: 81  YSGLPFAGLAISPFAAVAVAFFLNNSAYYAEIYRAGIQS 119


>gi|254460499|ref|ZP_05073915.1| amino acid ABC transporter, permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206677088|gb|EDZ41575.1| amino acid ABC transporter, permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 431

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 19/228 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R +    L           S  +GI+L+L      R       K + +++I       L 
Sbjct: 219 RDMGGFMLNFILGVVCVSLSLPIGILLAL-----GRQSDMIIIKWICVVFIEFIRGVPLI 273

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           +     + + I ++ ++AA+IAE+VR GL A+P
Sbjct: 274 TLLFVANVVLGYFLPP----------GSNFDLILRVIIMITMFSAAYIAEVVRGGLAALP 323

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ EAA +LGL + ++ RL++LPQA++  IP + +  + L K++ L   +   DLV + 
Sbjct: 324 KGQAEAAGSLGLDYAQSMRLIILPQALKISIPGIVNVAVGLFKDTVLVSVISMFDLVGMI 383

Query: 354 G----TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                      G   E+ L  +  +  +   I+ +   L  ++A   +
Sbjct: 384 RGPILASTEWNGVYWELWLAAVLFFFPICYGISQYSQWLERQLATGHR 431


>gi|29375693|ref|NP_814847.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227518372|ref|ZP_03948421.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227552901|ref|ZP_03982950.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229550389|ref|ZP_04439114.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|293383316|ref|ZP_06629231.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|293387527|ref|ZP_06632076.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294780988|ref|ZP_06746340.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|300859666|ref|ZP_07105754.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307268769|ref|ZP_07550137.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|307273808|ref|ZP_07555030.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|307274581|ref|ZP_07555761.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|307278847|ref|ZP_07559910.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|307288578|ref|ZP_07568562.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|312899592|ref|ZP_07758918.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|312903650|ref|ZP_07762826.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|312905823|ref|ZP_07764843.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|312909122|ref|ZP_07767981.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|312951369|ref|ZP_07770267.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|29343154|gb|AAO80917.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           V583]
 gi|227074050|gb|EEI12013.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX0104]
 gi|227177973|gb|EEI58945.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis HH22]
 gi|229304511|gb|EEN70507.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis ATCC 29200]
 gi|291079339|gb|EFE16703.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           R712]
 gi|291083037|gb|EFE20000.1| amino acid ABC transporter, permease protein [Enterococcus faecalis
           S613]
 gi|294451934|gb|EFG20384.1| ABC transporter, permease protein [Enterococcus faecalis PC1.1]
 gi|295112701|emb|CBL31338.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Enterococcus sp. 7L76]
 gi|300850484|gb|EFK78233.1| ABC transporter, permease protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306500485|gb|EFM69818.1| ABC transporter, permease protein [Enterococcus faecalis TX0109]
 gi|306504518|gb|EFM73725.1| ABC transporter, permease protein [Enterococcus faecalis TX0860]
 gi|306508733|gb|EFM77823.1| ABC transporter, permease protein [Enterococcus faecalis TX2134]
 gi|306509493|gb|EFM78541.1| ABC transporter, permease protein [Enterococcus faecalis TX0855]
 gi|306514897|gb|EFM83444.1| ABC transporter, permease protein [Enterococcus faecalis TX4248]
 gi|310628162|gb|EFQ11445.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 512]
 gi|310630629|gb|EFQ13912.1| ABC transporter, permease protein [Enterococcus faecalis TX0102]
 gi|310633003|gb|EFQ16286.1| ABC transporter, permease protein [Enterococcus faecalis TX0635]
 gi|311290546|gb|EFQ69102.1| ABC transporter, permease protein [Enterococcus faecalis DAPTO 516]
 gi|311293271|gb|EFQ71827.1| ABC transporter, permease protein [Enterococcus faecalis TX0470]
 gi|315028074|gb|EFT40006.1| ABC transporter, permease protein [Enterococcus faecalis TX2137]
 gi|315031595|gb|EFT43527.1| ABC transporter, permease protein [Enterococcus faecalis TX0017]
 gi|315034963|gb|EFT46895.1| ABC transporter, permease protein [Enterococcus faecalis TX0027]
 gi|315148454|gb|EFT92470.1| ABC transporter, permease protein [Enterococcus faecalis TX4244]
 gi|315150403|gb|EFT94419.1| ABC transporter, permease protein [Enterococcus faecalis TX0012]
 gi|315153640|gb|EFT97656.1| ABC transporter, permease protein [Enterococcus faecalis TX0031]
 gi|315156542|gb|EFU00559.1| ABC transporter, permease protein [Enterococcus faecalis TX0043]
 gi|315158368|gb|EFU02385.1| ABC transporter, permease protein [Enterococcus faecalis TX0312]
 gi|315160939|gb|EFU04956.1| ABC transporter, permease protein [Enterococcus faecalis TX0645]
 gi|315165528|gb|EFU09545.1| ABC transporter, permease protein [Enterococcus faecalis TX1302]
 gi|315170968|gb|EFU14985.1| ABC transporter, permease protein [Enterococcus faecalis TX1342]
 gi|315573709|gb|EFU85900.1| ABC transporter, permease protein [Enterococcus faecalis TX0309B]
 gi|315577478|gb|EFU89669.1| ABC transporter, permease protein [Enterococcus faecalis TX0630]
 gi|315582676|gb|EFU94867.1| ABC transporter, permease protein [Enterococcus faecalis TX0309A]
 gi|327534748|gb|AEA93582.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis OG1RF]
 gi|329576392|gb|EGG57905.1| putative glutamine ABC transporter permease protein GlnP
           [Enterococcus faecalis TX1467]
          Length = 221

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 4/159 (2%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L ++  ++  + P L     I          +  ++ + +T A +AEI+R GL  V +G
Sbjct: 57  LLASIYVEVVRNIPNLLWIYVIFLIFKIKSTPAGIVSFTVFTTAALAEIIRGGLNGVDKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q+EAA + G ++ +    ++LPQA+R+++P + SQ++ ++K++S L   +   +L     
Sbjct: 117 QIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSY 176

Query: 355 TI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +     QTGQ   I  I   IY  ++  I+ F   L+ 
Sbjct: 177 ILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSR 215



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+ I
Sbjct: 16  FQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWI 75

Query: 146 FFLYKSV 152
           + ++   
Sbjct: 76  YVIFLIF 82


>gi|332042181|gb|EGI78507.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 226

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 92/183 (50%), Gaps = 14/183 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  H +    + + Y    ++  LP L+L+ + Y           F F         F +
Sbjct: 54  RALHLRVLSLVVVAYAD--VMRSLPPLILLIVVY-----------FGFPSIGLPLSAFAT 100

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
            ++ALS   AA+  E + +G++++P GQMEAA + GL+  +A R V+LPQA+R  +PPLT
Sbjct: 101 TWLALSLVLAAYAEESIWAGIVSLPDGQMEAARSTGLSWWQAMRWVVLPQALRRSVPPLT 160

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ +++ KN++L   V  +++++      + +G     + +    YL + + + +    +
Sbjct: 161 NRVISITKNTALGSVVALSEILNQAQAASSTSGNPTP-LTLGALAYLVVFLPVVMLARWI 219

Query: 389 NAK 391
             +
Sbjct: 220 ERR 222


>gi|221212965|ref|ZP_03585941.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
 gi|221167178|gb|EED99648.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia multivorans CGD1]
          Length = 240

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 8/209 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYIST 226
                   LT+   A   + + V G++L++     +         +    +  PLL    
Sbjct: 10  FWLWHGFLLTLGLAAASALAATVGGLLLAVARHARASGLRALAAGYVVAFRNTPLLVQLL 69

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F  FG+ +L+       L+    +      +  +  S EF++ ++ LS YTAAF+AE   
Sbjct: 70  FWYFGVASLLPDTWTAWLNARHEL--GMGPLTLAWPSFEFVAGWVGLSAYTAAFVAEECE 127

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  QY+NL+KNSSLA+A+G 
Sbjct: 128 AGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIALPPLFGQYMNLVKNSSLAMAIGV 187

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           A+L      +  +T +      +   +Y+
Sbjct: 188 AELSYASRQVETETFKTFAAFGVATVLYV 216



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 60/159 (37%), Gaps = 4/159 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  LA +  + AT+ G L+   R +    +  +   YV  FRN P LV 
Sbjct: 8   YLFWLWHGFLLTLGLAAASALAATVGGLLLAVARHARASGLRALAAGYVVAFRNTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--- 201
           + F Y  V S+LP    +  L     L    L+    + +  A     S      ++   
Sbjct: 68  LLFWYFGVASLLPDTWTAW-LNARHELGMGPLTLAWPSFEFVAGWVGLSAYTAAFVAEEC 126

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               R  R        AL L  + +     LP  V IAL
Sbjct: 127 EAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 165


>gi|238762251|ref|ZP_04623223.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
 gi|238699598|gb|EEP92343.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
          Length = 222

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 14/214 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
               +I   S  L +VLS F   L R    +  + +    I    + G   LV +   + 
Sbjct: 18  WVTVQITFLSATLALVLS-FVFALLRLSPLRPVRVITAASIEF--LRGTSALVQL---FY 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L F  P+                 +  I L    ++F AEIVR  ++ V +GQ +A  AL
Sbjct: 72  LFFILPLF--------GISISPMTTAVIGLGLNFSSFGAEIVRGAIVNVSQGQRDALRAL 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
                 A R ++LPQA+  ++PPL +  + LLK++S+   +  +DL   G ++I   G  
Sbjct: 124 DFPPLMAFRRIILPQALPFMLPPLGNLLVELLKSTSVVSLITLSDLTFAGASLITTLGDQ 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I  + +  Y +++  +   +           +
Sbjct: 184 TLIWSMVLLCYFAMAWPLTRLVAHYERHHTRYRQ 217



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 30/88 (34%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  + F     A ++  +    RLS  + V  I    +E  R    LV +F+L
Sbjct: 13  LARGAWVTVQITFLSATLALVLSFVFALLRLSPLRPVRVITAASIEFLRGTSALVQLFYL 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +  +               G+ LN    
Sbjct: 73  FFILPLFGISISPMTTAVIGLGLNFSSF 100


>gi|171059884|ref|YP_001792233.1| polar amino acid ABC transporter inner membrane subunit [Leptothrix
           cholodnii SP-6]
 gi|170777329|gb|ACB35468.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptothrix cholodnii SP-6]
          Length = 225

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 14/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                        +  F+ V+G+ L + A    R +  K        Y+   LI   P +
Sbjct: 13  WPALLRGAAFTLGLSAFAAVIGVALGI-ACGWVRAWGPKPLAWGVATYVE--LIRNTPFI 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   +   F  P L       G  +SPE +S  IA+     A+  EIVR+G+   PRG
Sbjct: 70  VQLFFIF---FGLPSL-------GLRLSPE-VSSVIAMVVNLGAYAGEIVRAGIEGTPRG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA +L L   +    V+LP ++  + P L SQ + ++  S++   +   +L      
Sbjct: 119 QIEAARSLALDEAQVFIRVVLPPSLGRVWPALVSQIVIVMLGSAVCGQISAQELSYAANL 178

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I ++  +A E  LI   IYL L+I +   +N L  +
Sbjct: 179 IQSRNFRAFEAYLIAAGIYLLLAIGVRQALNWLGPR 214



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 33/70 (47%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+L G   T  L+    +    +G   G  R    K +AW    YVE+ RN P +V +
Sbjct: 13  WPALLRGAAFTLGLSAFAAVIGVALGIACGWVRAWGPKPLAWGVATYVELIRNTPFIVQL 72

Query: 146 FFLYKSVLSV 155
           FF++  + S+
Sbjct: 73  FFIFFGLPSL 82


>gi|169796220|ref|YP_001714013.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|184157851|ref|YP_001846190.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|213157046|ref|YP_002319091.1| glutamate/aspartate transport system permease protein GltJ
           [Acinetobacter baumannii AB0057]
 gi|215483675|ref|YP_002325896.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|239502272|ref|ZP_04661582.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB900]
 gi|294838745|ref|ZP_06783428.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013113]
 gi|294841310|ref|ZP_06785993.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6014059]
 gi|294859045|ref|ZP_06796814.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013150]
 gi|301347721|ref|ZP_07228462.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB056]
 gi|301596774|ref|ZP_07241782.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB059]
 gi|169149147|emb|CAM87026.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|183209445|gb|ACC56843.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|193077141|gb|ABO11919.2| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
 gi|213056206|gb|ACJ41108.1| glutamate/aspartate transport system permease protein GltJ
           [Acinetobacter baumannii AB0057]
 gi|213989092|gb|ACJ59391.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|322508166|gb|ADX03620.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii 1656-2]
 gi|323517740|gb|ADX92121.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 280

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLP 233
              + T    F+ +F+LG +L +  T  ++      + + +  + +PL+    F  F  P
Sbjct: 56  FTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFP 115

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                 L   L      +    +          +    AL  YTAA ++E VR+G+  V 
Sbjct: 116 E----FLPDSLSAGSGDVVAGGWWKNILNQQPAVIGVFALGLYTAARVSEHVRAGINTVS 171

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +  
Sbjct: 172 RGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 231

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 232 KTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKRMAV 272



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 3/117 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    ++   +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FR
Sbjct: 40  AYAEAPTWLQMLGSGVFTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFR 99

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           NIP +V +FF        LP    +     G  +                 +F    
Sbjct: 100 NIPLIVQLFFWAFVFPEFLPDSLSAGS---GDVVAGGWWKNILNQQPAVIGVFALGL 153


>gi|330965817|gb|EGH66077.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 225

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    LY+   ++ G+  LVL+   + L F  P+            
Sbjct: 41  FVIALLRLSPYRALRWFATLYVE--VLRGISALVLL---FYLFFILPLF--------GIR 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 88  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDALRALDFGPVSAFRRIILPQALPF 147

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 148 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 207

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 208 WLVRRYEQH 216



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  + F   +   ++  ++   RLS  + + W   +YVEV R I  LV+
Sbjct: 14  IARQLAHGAWVTLQITFLAELLVLVLAFVIALLRLSPYRALRWFATLYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|158313075|ref|YP_001505583.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EAN1pec]
 gi|158108480|gb|ABW10677.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EAN1pec]
          Length = 235

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 59/246 (23%), Positives = 103/246 (41%), Gaps = 12/246 (4%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           ++  P         +G    +  L    +  +   +    S    +   +  T L+    
Sbjct: 1   MAGRPEQRSEHRADYGWSHIDAVLDNLDIFREGFVQTLRLSLFAAVSALILGTGLAA--- 57

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            +     PL +  T  +  +    L  + + + F  P +          V   F    +A
Sbjct: 58  MRVSPVPPLRWAGTAYVETVRNTPLTIVFFFVVFVLPQVD--------IVFSYFTFAVMA 109

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+ Y  A + E VRSG+  V  GQ EAA ALGLT  +  RLV+LPQA R+++ PL S   
Sbjct: 110 LTIYHTALVCEAVRSGVNGVDAGQAEAARALGLTFSQTLRLVVLPQAFRNVVQPLGSVGS 169

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            L++N+S+A A G  +L  +   +     G  I ++L  +  YL L++ +A  +     +
Sbjct: 170 ALIRNTSIAAAFGVQELTGISQRLTTANPGDVIAVLLAGIVCYLVLTLSLAWAVGLTERR 229

Query: 392 IALKEK 397
           +    +
Sbjct: 230 LTRTPR 235



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 38/85 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GFV T  L+    + A I+GT + A R+S    + W    YVE  RN P  +V FF+   
Sbjct: 33  GFVQTLRLSLFAAVSALILGTGLAAMRVSPVPPLRWAGTAYVETVRNTPLTIVFFFVVFV 92

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGL 176
           +  V  +  +       + + +  L
Sbjct: 93  LPQVDIVFSYFTFAVMALTIYHTAL 117


>gi|330957138|gb|EGH57398.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 221

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + L           ++     +LG+ L +    + R +  +    +  +Y+  
Sbjct: 5   FDFTPVLQNLDVLLRGALFTLELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE- 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI   P LV +   +           F          E+ +  +A+     A+  EIVR
Sbjct: 63  -LIRNTPFLVQLFFIF-----------FGLPSLGVQITEWQAAVLAMVVNLGAYSTEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +L      I ++  ++ E  ++   IYL+++++I   +  +  +   + +
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLIRQLLAWIGRRYISRSR 221



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQNLDVLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVVNLGAYSTEIVRAGIQAI 116


>gi|328944592|gb|EGG38753.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 230

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             ++   E++   L   YI  F++   P +VL+ L +   +  P   ++           
Sbjct: 42  AWAQIAEEQSFAGLARGYI--FILRCTPPIVLLFLVF---YGIPEFLEWWLGLDINNWSR 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I +    AA IAE+ ++  +AVP+GQ EA +++GLT  +    ++LPQA R  +P
Sbjct: 97  TVFVIITMILLFAAMIAEVFKAAYLAVPKGQTEAGLSIGLTPVQTFLRIILPQAFRIALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            LT+  LNL+++++LA  +G  D++  G  +I++     ++E       IY  ++++++L
Sbjct: 157 NLTTALLNLMRDAALAYTIGAVDVMGAGQNLISRNLGNYSLETYTALALIYWGIALVVSL 216

Query: 384 FMNRLNAKIALKEK 397
               L   + +KE+
Sbjct: 217 VSQLLEKSLTVKER 230


>gi|317487127|ref|ZP_07945930.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
 gi|316921611|gb|EFV42894.1| binding-protein-dependent transport system inner membrane component
           [Bilophila wadsworthia 3_1_6]
          Length = 328

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 66/314 (21%), Positives = 114/314 (36%), Gaps = 22/314 (7%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G V     A  G++P       +G        ++     + V       P +     
Sbjct: 22  FLWGLVVALIAAAWGLLPPAGTSLGIGGWLGMGLYMLLAAVPMIVTTMDKRRPQLAGTAA 81

Query: 149 YKSVLSVLPIPDH-----SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL- 202
               L +L +  +        +   MF N   +      +    +  +  F+   VLS+ 
Sbjct: 82  ALGFLGLLGLVFYRYSGAQWDMLGMMFFNRELIVETWPILLGGLENTLLIFICSAVLSVT 141

Query: 203 --FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
                 + R  +          ++  F    +  LV I + Y L F              
Sbjct: 142 IAPIIAIIRTLNNPIFNCAIDAFVDVFRSLPILVLV-IFIYYALPFL------------E 188

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
             S  F +    L     AF+ E  R+G+ +V RG +EAA +LGL   +  R V+LP A+
Sbjct: 189 IHSTPFAAGVCGLFLSALAFMIEYFRAGIESVSRGHVEAARSLGLGVIQTMRFVILPLAI 248

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R ++PPLT   + LLK ++    VG  +L+     I+        ++ I   +YL L + 
Sbjct: 249 RVVLPPLTGHLVGLLKATAFVSVVGMPELLKRAMEIVEWKANPTPLVTI-TIMYLILLLP 307

Query: 381 IALFMNRLNAKIAL 394
           +      L  ++A 
Sbjct: 308 LMYGSTLLERRLAR 321



 Score = 39.9 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 38/97 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G  NT  +     + +  I  ++   R   N +       +V+VFR++P LV++
Sbjct: 118 WPILLGGLENTLLIFICSAVLSVTIAPIIAIIRTLNNPIFNCAIDAFVDVFRSLPILVLV 177

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            F+Y ++  +            G+FL+          
Sbjct: 178 IFIYYALPFLEIHSTPFAAGVCGLFLSALAFMIEYFR 214


>gi|182435042|ref|YP_001822761.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326775558|ref|ZP_08234823.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
 gi|178463558|dbj|BAG18078.1| putative glutamate ABC transporter permease protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326655891|gb|EGE40737.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces cf. griseus XylebKG-1]
          Length = 214

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++  L +VL        R     + + L  ++++      L  L    L     F
Sbjct: 19  VELTVYASALALVLGFLMASF-RVAPVGSFRVLGTVWVTVLRNTPLTLLFFAVLLGLPRF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +  Q                 +AL CYT+AFI E++RSG+  VPRGQ EAA +LG+ 
Sbjct: 78  GLVLPFQVF-------------AVLALGCYTSAFICEVLRSGINTVPRGQGEAARSLGMN 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA RS+IPP+ S  + L KNS++A A    +L+    T+       I  
Sbjct: 125 FGQTLSTVVLPQAFRSVIPPVGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSIIWS 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+   N +  +  +  
Sbjct: 185 FIWIAVGYLIITLTISAVFNVMEKRWGVAR 214



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L       A ++G L+ + R++       +  V+V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASALALVLGFLMASFRVAPVGSFRVLGTVWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|315612797|ref|ZP_07887708.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis ATCC 49296]
 gi|315314907|gb|EFU62948.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis ATCC 49296]
          Length = 231

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF++G+++S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 27  HIAVWGILGSFLVGLIVSVI-----RHYRVPIFSQLATAYIE--LSRNTPLLIQLFFLY- 78

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 79  ----------FGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 129 GLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 188

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 189 DIALAMLVVAYLIMLLPISLVFSWIERRLR 218



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 45/116 (38%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +   I+ ++    Y       F  T  +A  G++ + ++G +V   R     + + +   
Sbjct: 1   MGGSILDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLVGLIVSVIRHYRVPIFSQLATA 60

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y+E+ RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  YIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEA 116


>gi|148997217|ref|ZP_01824871.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|168486795|ref|ZP_02711303.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|168575369|ref|ZP_02721305.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|307067317|ref|YP_003876283.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|147756917|gb|EDK63957.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|183570244|gb|EDT90772.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|183578523|gb|EDT99051.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|306408854|gb|ADM84281.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
          Length = 226

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRLR 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|315144630|gb|EFT88646.1| ABC transporter, permease protein [Enterococcus faecalis TX2141]
          Length = 221

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 4/159 (2%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L ++  ++  + P L     I          +  ++ + +T A +AEI+R GL  V +G
Sbjct: 57  LLASIYVEVVRNIPNLLWIYVIFLIFKIKSIPAGIVSFTVFTTAALAEIIRGGLNGVDKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q+EAA + G ++ +    ++LPQA+R+++P + SQ++ ++K++S L   +   +L     
Sbjct: 117 QIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSY 176

Query: 355 TI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +     QTGQ   I  I   IY  ++  I+ F   L+ 
Sbjct: 177 ILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSR 215



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+ I
Sbjct: 16  FQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWI 75

Query: 146 FFLYKSV 152
           + ++   
Sbjct: 76  YVIFLIF 82


>gi|307706281|ref|ZP_07643094.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus mitis SK321]
 gi|307618314|gb|EFN97468.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus mitis SK321]
          Length = 225

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIGISILSVLLSMIFGTVMGIIM-----TSHSRIVRFLTRLYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  AL LT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALDLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCFPISKLSTHLEKH 222



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + I GT++G    S +++V ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMIFGTVMGIIMTSHSRIVRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|257878297|ref|ZP_05657950.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257889502|ref|ZP_05669155.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257892557|ref|ZP_05672210.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260559848|ref|ZP_05832027.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|293559677|ref|ZP_06676205.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1162]
 gi|293569921|ref|ZP_06681008.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1071]
 gi|294615206|ref|ZP_06695087.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1636]
 gi|294620020|ref|ZP_06699385.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1679]
 gi|257812525|gb|EEV41283.1| amino acid ABC transporter [Enterococcus faecium 1,230,933]
 gi|257825862|gb|EEV52488.1| amino acid ABC transporter [Enterococcus faecium 1,231,410]
 gi|257828936|gb|EEV55543.1| amino acid ABC transporter [Enterococcus faecium 1,231,408]
 gi|260074072|gb|EEW62395.1| amino acid ABC transporter [Enterococcus faecium C68]
 gi|291587669|gb|EFF19546.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1071]
 gi|291591930|gb|EFF23558.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1636]
 gi|291593742|gb|EFF25251.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1679]
 gi|291606352|gb|EFF35758.1| L-cystine transport system permease protein TcyB [Enterococcus
           faecium E1162]
          Length = 220

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTF 227
           M+      S    ++    +  V++  +G V   L                LPL     F
Sbjct: 2   MYFPLIDFSLMWTSLPFVLQGLVYTLGIGFVSFLLGNLVGLLLTVLGLLDWLPLNVFIRF 61

Query: 228 L---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G+P LVL+ L Y               G         +  I  +  ++AFI EI
Sbjct: 62  YLSFFRGIPALVLLFLLY--------------FGLPYQLSALTASVICFTITSSAFIGEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  ++L+K +SLA  +
Sbjct: 108 YRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++      I  +T     + ++   IY  + I I      L  +
Sbjct: 168 TVPEIFQKAKIIGGRTFDYFSLYILVALIYWVICIGIEKVQQYLEKR 214


>gi|32266982|ref|NP_861014.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter hepaticus ATCC 51449]
 gi|32263034|gb|AAP78080.1| putative ABC-type amino-acid transporter permease protein
           [Helicobacter hepaticus ATCC 51449]
          Length = 219

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            G   N   L F    +     + + + V+ I+   F   ++R++  +   +L  +YI  
Sbjct: 1   MGNVFNQSNLHFLLDGLYLTLVVALATCVISIIFGTFL-AITRNYGGRIISSLAAIYIEV 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    L   +L A+         VL  F       +        I  S YT++ +AEI+R
Sbjct: 60  FRNTPLLLWMLTAVF--------VLPSFFGRAEPAIW-----GTIGFSLYTSSVMAEIIR 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL +VP+GQ EAA + G +       ++LPQ  R +IP + SQ +   K++S    +  
Sbjct: 107 GGLNSVPKGQFEAAYSQGFSQFFTLFYIILPQTFRKVIPSMLSQIITTFKDTSFLAGLQI 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFI---YLSLSIMIALFMNRLNAKIA 393
           A+L      I+ Q     EI+ +   I   Y  +   +++ +  L+ K+A
Sbjct: 167 AELTYQSKIILAQLASFQEILAMIGLIAGVYFVICFSLSVLVRYLDKKMA 216



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S    +L G   T  +A +  + + I GT +   R    ++++ +  +Y+EVFRN P 
Sbjct: 6   NQSNLHFLLDGLYLTLVVALATCVISIIFGTFLAITRNYGGRIISSLAAIYIEVFRNTPL 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVL 196
           L+ +      + S     + +I    G  L    +    +    N+         +S   
Sbjct: 66  LLWMLTAVFVLPSFFGRAEPAIWGTIGFSLYTSSVMAEIIRGGLNSVPKGQFEAAYSQGF 125

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
               +LF   L + F +     L  +  +      L  L +  L YQ       L  F  
Sbjct: 126 SQFFTLFYIILPQTFRKVIPSMLSQIITTFKDTSFLAGLQIAELTYQSKIILAQLASFQE 185

Query: 257 IGGSTVSPEFMSLYIALSC 275
           I         +   I  S 
Sbjct: 186 ILAMIGLIAGVYFVICFSL 204


>gi|87121346|ref|ZP_01077236.1| polar amino acid uptake family ABC transporter, permease protein
           [Marinomonas sp. MED121]
 gi|86163503|gb|EAQ64778.1| polar amino acid uptake family ABC transporter, permease protein
           [Marinomonas sp. MED121]
          Length = 279

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 9/232 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           V     +            +     + V SF+ G ++++    L +         L L +
Sbjct: 49  VNNLSWYWIPEYQDAILEGLWRTLILLVTSFITGFLIAIPIG-LVQVTGPSFLAKLALSF 107

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAA 279
            +  LI G P L+ I L Y       +  + +++  S + P     +   +IAL+   AA
Sbjct: 108 CT--LIRGTPLLLQIWLLYYG--VGSIFPEIDWLRESFLWPYLTDAWPYAFIALTLSVAA 163

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  EI+R     VP+G++EAA A G+   K    + LP+A++  +P +  + +  LK + 
Sbjct: 164 YEGEIMRGAFAGVPKGELEAAKAFGMPPFKILSRIWLPRAIQRTLPVIGGEVILQLKATP 223

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L   +   D  +V   I  +T    E +L+   IYLSL+ +IAL  + L  +
Sbjct: 224 LVATITLIDTYAVFSKIRQETYIVYEPLLLMTGIYLSLAGIIALLFHYLEKR 275



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 37/95 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y  AIL G   T  L  +  I   +I   +G  +++    +A +   +  + R  P L+ 
Sbjct: 60  YQDAILEGLWRTLILLVTSFITGFLIAIPIGLVQVTGPSFLAKLALSFCTLIRGTPLLLQ 119

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
           I+ LY  V S+ P  D         +L +      
Sbjct: 120 IWLLYYGVGSIFPEIDWLRESFLWPYLTDAWPYAF 154


>gi|229546204|ref|ZP_04434929.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|256852767|ref|ZP_05558137.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|307291100|ref|ZP_07570985.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|229308728|gb|EEN74715.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus faecalis TX1322]
 gi|256711226|gb|EEU26264.1| amino acid ABC transporter [Enterococcus faecalis T8]
 gi|306497754|gb|EFM67286.1| ABC transporter, permease protein [Enterococcus faecalis TX0411]
 gi|315030717|gb|EFT42649.1| ABC transporter, permease protein [Enterococcus faecalis TX4000]
          Length = 221

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 4/159 (2%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L ++  ++  + P L     I          +  ++ + +T A +AEI+R GL  V +G
Sbjct: 57  LLASIYVEVVRNIPNLLWIYVIFLIFKIKSTPAGIVSFTVFTTAALAEIIRGGLNGVDKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q+EAA + G ++ +    ++LPQA+R+++P + SQ++ ++K++S L   +   +L     
Sbjct: 117 QIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSY 176

Query: 355 TI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +     QTGQ   I  I   IY  ++  I+ F   L+ 
Sbjct: 177 ILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSR 215



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +++F  +I +TI GT++   R   N  +  +  +YVEV RNIP L+ I
Sbjct: 16  FQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWI 75

Query: 146 FFLYKSV 152
           + ++   
Sbjct: 76  YVIFLIF 82


>gi|210611519|ref|ZP_03288939.1| hypothetical protein CLONEX_01129 [Clostridium nexile DSM 1787]
 gi|319936516|ref|ZP_08010931.1| polar amino acid ABC transporter [Coprobacillus sp. 29_1]
 gi|210151966|gb|EEA82973.1| hypothetical protein CLONEX_01129 [Clostridium nexile DSM 1787]
 gi|319808408|gb|EFW04963.1| polar amino acid ABC transporter [Coprobacillus sp. 29_1]
          Length = 219

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 14/219 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           KI     +  IV+ LF   L RH+       +   YI  F     P 
Sbjct: 9   YLPLYEKACILTLKIGWIGILFAIVIGLF-CALIRHYKVPVLSTIAGGYIEFF--RNTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV +   + L+F  P L       G ++  EF  +        A ++AE  RSGL +V +
Sbjct: 66  LVQL---FFLYFGLPKL-------GISIGAEFCGVLGLALLGGA-YMAEAFRSGLESVEQ 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            QME+A++LG++ ++A R ++LPQA+   +P   +  + LLK +S+  A+   DL+    
Sbjct: 115 IQMESALSLGMSRQQAVRHIILPQAISISVPAFVANIIFLLKETSVFSAISLMDLMFTAK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +I    +  E +++ +  YL + + ++L  + +  K+ 
Sbjct: 175 DLIGLYYKTTECLVLLVIFYLIILLPVSLIGSIVERKVR 213



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           SY        + T  + + G++ A +IG      R     +++ I   Y+E FRN P LV
Sbjct: 8   SYLPLYEKACILTLKIGWIGILFAIVIGLFCALIRHYKVPVLSTIAGGYIEFFRNTPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
            +FFLY  +  +        
Sbjct: 68  QLFFLYFGLPKLGISIGAEF 87


>gi|254250730|ref|ZP_04944049.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
 gi|124879864|gb|EAY67220.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia cenocepacia PC184]
          Length = 245

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 95/212 (44%), Gaps = 11/212 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   + VLG+ + +              +  PL+      I   P +V +   +   F
Sbjct: 42  LALTAVATVLGVAVGVLGAAAYSADARAAVRLRPLIGAYVEAIRNTPFVVQLFFIF---F 98

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L             E+ +  +A++    A+  EIVR+G+ AVP+G +EAA AL ++
Sbjct: 99  GLPAL--------GVHIDEYTAAILAMTLNLGAYSVEIVRAGVAAVPKGHLEAASALAMS 150

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQA+  + P L+SQ +  +  S++   +  ADL      I ++  +A E 
Sbjct: 151 RAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYAASYIQSRNFRAFET 210

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +    YL++++++   +  +  ++  +  +
Sbjct: 211 YFVITLAYLAMALLLRATLGAMGRRLFTRRVR 242


>gi|293377065|ref|ZP_06623275.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
 gi|292644281|gb|EFF62381.1| ABC transporter, permease protein [Enterococcus faecium PC4.1]
          Length = 220

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTF 227
           M+      S    ++    +  V++  +G V   L                LPL     F
Sbjct: 2   MYFPLIDFSLMWTSLPFVLQGLVYTLGIGFVSFVLGNLVGLLLTVLGLLDWLPLNVFIRF 61

Query: 228 L---IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                 G+P LVL+ L Y               G         +  I  +  ++AFI EI
Sbjct: 62  YLSFFRGIPALVLLFLLY--------------FGLPYQLSALTASVICFTITSSAFIGEI 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  L  V  GQ +A +A G +     + ++LPQA R  +P L++  ++L+K +SLA  +
Sbjct: 108 YRGSLAGVSSGQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATI 167

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++      I  +T     + ++   IY  + I I      L  +
Sbjct: 168 TVPEIFQKAKIIGGRTFDYFSLYILVALIYWIICIGIEKVQQYLEKR 214


>gi|331266848|ref|YP_004326478.1| ABC transporter membrane-spanning permease,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
 gi|326683520|emb|CBZ01138.1| ABC transporter membrane-spanning permease,polar amino acid
           transport system; glutamine transport,putative
           [Streptococcus oralis Uo5]
          Length = 219

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSVQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY   +  I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFIFNFAISSLSHMLAKR 213



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|322373495|ref|ZP_08048031.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
 gi|321278537|gb|EFX55606.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
          Length = 226

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+V+S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 22  HIAVLGIIGSFLLGLVVSVI-----RHYRVPILSQLSTAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V        + L     +++AE  RSGL AV + Q E  +++
Sbjct: 74  ----------FGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DVALGMLVVAYLLMLLPISLVFSWIERRLR 213



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G+I + ++G +V   R     +++ +   Y+E+ 
Sbjct: 1   MDWSIVQQYLPFYQKAFFLTLHIAVLGIIGSFLLGLVVSVIRHYRVPILSQLSTAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +         G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEA 111


>gi|225858526|ref|YP_002740036.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|225720933|gb|ACO16787.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
          Length = 226

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIILLPISLVFSWIERRLR 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|183598118|ref|ZP_02959611.1| hypothetical protein PROSTU_01483 [Providencia stuartii ATCC 25827]
 gi|188020277|gb|EDU58317.1| hypothetical protein PROSTU_01483 [Providencia stuartii ATCC 25827]
          Length = 246

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 17/227 (7%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTGKALPLLYISTF 227
             LS   +T+  +   ++ +F++G    +  T  +R        + +  + +PL+     
Sbjct: 24  WLLSGLEVTVALSICAWIIAFLVGSFFGILRTVPNRFLAMIGTVYVELFRNVPLIVQFFT 83

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +P L+  ++      D     QF           F+S  + L  +TAA + E VR+
Sbjct: 84  WYLVIPELLPRSIGDWFKMDLDPNYQF-----------FISSTLCLGLFTAARMTEQVRA 132

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++PRGQ  A +A+GLT  +  R VLLP A R I+PP+TS+ LNL+KNS++A  +G  
Sbjct: 133 AIQSLPRGQKNAGLAMGLTLPQTYRYVLLPNAYRVILPPMTSEMLNLVKNSAIASTIGLV 192

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +  G +++ +  A E        Y+ ++++I L MN L  K+ L
Sbjct: 193 DMAAQAGKLLDYSAHAWESFTAITLAYVGINLIIMLLMNLLERKVRL 239



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 10/111 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           ++   G   + A F           +++Y   +L G   T  L+    I A ++G+  G 
Sbjct: 3   INWNWGIFLQEAPFG----------NTTYLGWLLSGLEVTVALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            R   N+ +A I  VYVE+FRN+P +V  F  Y  +  +LP          
Sbjct: 53  LRTVPNRFLAMIGTVYVELFRNVPLIVQFFTWYLVIPELLPRSIGDWFKMD 103


>gi|325062400|gb|ADY66090.1| polar amino acid uptake family ABC transporter, permease protein
           [Agrobacterium sp. H13-3]
          Length = 238

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 12/183 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +  +  P L    F  F L TL L           P+L              F    
Sbjct: 60  LFVEVFRNTPPLLQMLFAYFTLSTLGLKVTDPSTGLQMPLL------------SAFACAS 107

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I+LS +  A   E  RSG+  +PR  +EAA +LG +       V  P A+R  +P +T+ 
Sbjct: 108 ISLSLFGGALAIEAFRSGIETMPRSIIEAARSLGYSRWSRFWKVEAPIAVRISLPAITNI 167

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             NL K +S A  +   +L+   G I N T + +E++++ + IY+ L  ++   M+RL A
Sbjct: 168 LTNLFKTTSQASVITVPELMYYAGQIYNDTFRTLEVMILVLVIYVGLVSILTFAMSRLEA 227

Query: 391 KIA 393
            +A
Sbjct: 228 WMA 230



 Score = 43.8 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F +D   +   +D +Y   +L G +NT  LA      A +IG L           +  I 
Sbjct: 2   FGLDYSWL---TDPAYQQWLLTGVLNTLKLAALSSSAAIVIGLLGALALTLRIFWLDAII 58

Query: 130 RVYVEVFRNIPPLVVIFFLYK 150
            ++VEVFRN PPL+ + F Y 
Sbjct: 59  ELFVEVFRNTPPLLQMLFAYF 79


>gi|266626099|ref|ZP_06119034.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288861995|gb|EFC94293.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 234

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 6/173 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            + G+PTLVLI L   L+   P +     +  S V  +   +  +LS  T+A +AE++R+
Sbjct: 63  FMRGIPTLVLIFL---LYLGLPQVMAALGVDLSGV-SKTSYIIASLSLSTSANMAEMMRA 118

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
             +AV +GQ EAA ++G+    A   ++ PQA    IP L +  + L K +SLA  VG  
Sbjct: 119 AYLAVEKGQREAAYSVGMKGSSAFFRIIFPQAFGIAIPMLGNNIILLFKETSLAFTVGVI 178

Query: 348 DLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           D++     I + +     +E+ L    I+ ++  ++               ++
Sbjct: 179 DILGKARAISSASYGSNRLEVYLAAGIIFWAVCALLEQLSKWAEKLYTKGRRQ 231



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 41/72 (56%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL  F  T  +    ++ + +IGTLV AG LS+++++  I + Y+   R IP LV+
Sbjct: 13  YIPRILKAFPMTVEILSLSLLFSLVIGTLVAAGALSSHRILGRISKGYISFMRGIPTLVL 72

Query: 145 IFFLYKSVLSVL 156
           IF LY  +  V+
Sbjct: 73  IFLLYLGLPQVM 84


>gi|255318801|ref|ZP_05360027.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter radioresistens SK82]
 gi|262378935|ref|ZP_06072092.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter radioresistens SH164]
 gi|255304057|gb|EET83248.1| polar amino acid ABC transporter, inner membrane subunit
           [Acinetobacter radioresistens SK82]
 gi|262300220|gb|EEY88132.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Acinetobacter radioresistens SH164]
          Length = 227

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 5/214 (2%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               T     V    LG +L      L R    +    +   Y++ F      ++ L+ +
Sbjct: 19  WYGMTITLKVVCIATLGGILIGTLLALMRLSSFRILNLVAQAYVNLFR-----SIPLLLV 73

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
               +F  P +         T+    +S  +A   + AA+ +EIVR+G+ ++PRGQ  AA
Sbjct: 74  LMWFYFAVPFIYTTITGRFLTIDTALVSSIVAFMLFEAAYFSEIVRAGIQSIPRGQSAAA 133

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            ALG+T+ +  RLV+LPQA R + P L  Q + L ++S++  A+G  D         +  
Sbjct: 134 YALGMTYSQNMRLVVLPQAFRKMTPLLLQQTIILFQDSTMVYAIGLLDFFRSNYVRGDLM 193

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               + IL    +Y ++S +    + RL  ++ +
Sbjct: 194 SLLTQYILFAGLVYFTISALATYTVRRLQKRLHV 227



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 38/71 (53%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A+  G   T  +     +   +IGTL+   RLS+ +++  + + YV +FR+IP L+V+
Sbjct: 15  GPALWYGMTITLKVVCIATLGGILIGTLLALMRLSSFRILNLVAQAYVNLFRSIPLLLVL 74

Query: 146 FFLYKSVLSVL 156
            + Y +V  + 
Sbjct: 75  MWFYFAVPFIY 85


>gi|209516320|ref|ZP_03265177.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209503256|gb|EEA03255.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 254

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 70/130 (53%)

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               E  +  +A++    A+  EIVRSG+ ++ RGQ++AA ALGL  R+  R V+LPQA+
Sbjct: 85  IHIDEIQAAILAMTVNLGAYATEIVRSGIDSISRGQVQAAQALGLHGRQVFRYVVLPQAL 144

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            ++ P L  Q L ++  S++   +   DL      I ++  ++ E  +I    YL +SI+
Sbjct: 145 ANVFPALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITATYLLMSIV 204

Query: 381 IALFMNRLNA 390
           +   +NR   
Sbjct: 205 LRQLLNRFGR 214


>gi|148989074|ref|ZP_01820474.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147925571|gb|EDK76648.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
          Length = 225

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 91/221 (41%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +         H +  + L  LY+    I      
Sbjct: 19  LQGLGVTIGISILSVLLSMMFGTVMGIIM-----TSHSRIIRFLTRLYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S+ I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------TSVIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILILYFAVCYPISKLSTHLEKH 222



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + + GT++G    S ++++ ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMMFGTVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|238893279|ref|YP_002918013.1| glutamate/aspartate transport system inner membrane component
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238545595|dbj|BAH61946.1| glutamate/aspartate transport system inner membrane component
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 250

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 4/189 (2%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                +  PLL    F  F    L+ +A+K  ++ +         +   T  PEF+    
Sbjct: 62  WVSLFRNTPLLVQLLFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLT--PEFLCSMW 119

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + +   P+  QY
Sbjct: 120 GLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLANAWQPIVGQY 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL--N 389
           LNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L   + + + RL   
Sbjct: 180 LNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGAAMGVALTRLGPG 239

Query: 390 AKIALKEKK 398
            K+    + 
Sbjct: 240 RKLQRSARH 248



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ T W++ +G++ AT++  L+ A RL   +    +   +V +FRN P LV +
Sbjct: 16  LQWIISGFLTTVWVSVAGILLATLLAVLLLALRLGGGRAGRGLVAAWVSLFRNTPLLVQL 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL----NNRGLSFPTLTMDTNAKIFVFSFVL 196
            F Y +  ++LP+    +V     +     N   L+   L       +F  +F++
Sbjct: 76  LFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLTPEFLCSMWGLGVFTSAFLV 130


>gi|88800373|ref|ZP_01115939.1| amino acid ABC transporter [Reinekea sp. MED297]
 gi|88776950|gb|EAR08159.1| amino acid ABC transporter [Reinekea sp. MED297]
          Length = 217

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 90/217 (41%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                T    +  + + G+ +++F   +        G  + ++ +    +   P    I 
Sbjct: 1   MEFDFTPVITYFPTLMKGLGVAIFVAIIVALMSVLGGLLVAVISVYINKVLSWPLRFFIW 60

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L         +   +  IG   + P  +   + L  +  A+ A+I  + L +V  GQ EA
Sbjct: 61  LFMTTPLLLQLYLLYFGIGEWVLIPAVVVGILGLGFHYMAYNADIFVATLKSVSDGQYEA 120

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           + +LG  H      +L+PQA    IP + +  + ++K++S+  A+G A+LV      I+ 
Sbjct: 121 SRSLGFGHTATIFYILVPQAFIRSIPQIGNNMILMVKDTSVLSAIGVAELVYASQYAISV 180

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +  E  ++   +Y  +++ + L    L    A + 
Sbjct: 181 SFRPFEFFIVIAIMYYIINVFMELGQVWLERLTAYRR 217


>gi|57242095|ref|ZP_00370035.1| amino acid ABC transporter, permease protein [Campylobacter
           upsaliensis RM3195]
 gi|315638190|ref|ZP_07893372.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter upsaliensis JV21]
 gi|57017287|gb|EAL54068.1| amino acid ABC transporter, permease protein [Campylobacter
           upsaliensis RM3195]
 gi|315481726|gb|EFU72348.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter upsaliensis JV21]
          Length = 219

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + ++F    +    KI + + V+ I+   F   +++++ ++  + L   YI  F   
Sbjct: 5   FNAQNINFLMQGLALTLKIALATCVISILFGTFL-AITKNYGDRFSRFLASAYIDIFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                 L+       F  PV             P+     I  S YT++ +AEI+R GL 
Sbjct: 64  P-----LLLWMLAACFVLPVFFG--------QFPQAFWGTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R ++P + SQ +  +K+++    +G A+L 
Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRRVVPSMLSQIITTIKDTAYLAGLGIAELT 170

Query: 351 SVGGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNRLNAKIA 393
               TI+       EI+ I  F   IY  +   +++ +     K A
Sbjct: 171 YKSKTILANLKSFEEILAIIGFVAGIYFVICFSLSMLVRYYAKKTA 216



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 61/192 (31%), Gaps = 5/192 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +A +  + + + GT +   +   ++   ++   Y+++FRN P L+ +   
Sbjct: 13  LMQGLALTLKIALATCVISILFGTFLAITKNYGDRFSRFLASAYIDIFRNTPLLLWMLAA 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVLGIVLSLF 203
              +         +     G  L    +    +    N+         +S   G   +LF
Sbjct: 73  CFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLF 132

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L + F       L  +  +      L  L +  L Y+       L  F  I      
Sbjct: 133 YIILPQTFRRVVPSMLSQIITTIKDTAYLAGLGIAELTYKSKTILANLKSFEEILAIIGF 192

Query: 264 PEFMSLYIALSC 275
              +   I  S 
Sbjct: 193 VAGIYFVICFSL 204


>gi|326803651|ref|YP_004321469.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651650|gb|AEA01833.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 230

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 12/223 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           + F  +++      F    +LG++L+       R + + T           F++   P +
Sbjct: 17  IPFIPVSLFILIISFTLGNLLGLILAYGLEAKQRWYQQIT-------KTYIFIMRCTPPI 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V+I L +   +  P L ++          + + + IAL+    A I+ + ++   AV +G
Sbjct: 70  VMIFLVF---YGLPQLLKWWLKINIHDFSQAVFVIIALTLLYGANISVVFKASYDAVNKG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA +ALGL+  +    +LLPQA+R  +P + +  ++LLKN++LA  +G  D++  G  
Sbjct: 127 QREAGLALGLSEARTFFRILLPQALRIALPNIGNSTVSLLKNTALAYTIGLIDVMGAGQL 186

Query: 356 IINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            IN+     ++E  L    IY  ++ +I + ++ L  +I+  E
Sbjct: 187 FINRNMGNFSLETDLAVAIIYWIIAGLIMVSIHLLEKEISKGE 229


>gi|322386069|ref|ZP_08059708.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269913|gb|EFX52834.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 231

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 90/220 (40%), Gaps = 14/220 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L            I V+  +   ++ L    + RH+       L   YI   L    P
Sbjct: 13  QYLPLYQKAFFLTLHIAVWGILGAFLVGLLV-SIIRHYRIPVLAQLATAYIE--LSRNTP 69

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ +   Y           F       V    +   + L     +++AE  RSGL AV 
Sbjct: 70  LLIQLFFLY-----------FGLPRIGIVLSSEVCATLGLIFLGGSYMAESFRSGLEAVS 118

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           + Q E  +A+GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V 
Sbjct: 119 QTQHEIGLAIGLTPVQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVA 178

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +I    +    + + +  YL + + I+L  + +  ++ 
Sbjct: 179 KDLIGLYYETDIALAMLVVAYLIMLLPISLLFSWIERRLR 218



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 46/116 (39%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +   ++ ++    Y       F  T  +A  G++ A ++G LV   R     ++A +   
Sbjct: 1   MGGSLLDWSIVEQYLPLYQKAFFLTLHIAVWGILGAFLVGLLVSIIRHYRIPVLAQLATA 60

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y+E+ RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  YIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLIFLGGSYMAESFRSGLEA 116


>gi|315174636|gb|EFU18653.1| ABC transporter, permease protein [Enterococcus faecalis TX1346]
          Length = 221

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 4/159 (2%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L ++  ++  + P L     I          +  ++ + +T A +AEI+R GL  V +G
Sbjct: 57  LLASIYVEVVRNIPNLLWIYVIFLILKIKSTPAGIVSFTVFTTAALAEIIRGGLNGVDKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q+EAA + G ++ +    ++LPQA+R+++P + SQ++ ++K++S L   +   +L     
Sbjct: 117 QIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSY 176

Query: 355 TI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +     QTGQ   I  I   IY  ++  I+ F   L+ 
Sbjct: 177 ILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSR 215



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+ I
Sbjct: 16  FQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWI 75

Query: 146 FFLYKSV 152
           + ++  +
Sbjct: 76  YVIFLIL 82


>gi|307132299|ref|YP_003884315.1| amino acid ABC transporter permease, 3-TM region,
           His/Glu/Gln/Arg/opine [Dickeya dadantii 3937]
 gi|306529828|gb|ADM99758.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Dickeya dadantii 3937]
          Length = 221

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)

Query: 237 LIALKYQLHFDKPVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L  L  +   + P + Q  FI     G         +  +A+     A+  EI+R+G+  
Sbjct: 56  LWGLYVEAIRNTPFVVQLFFIVFGLPGLGLKLTAGQAALLAMLVNLGAYSTEIIRAGIQV 115

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
            P+GQ EAA  LGL+  +    V+LP A++ I P L SQ + ++  SS+   V F +L  
Sbjct: 116 TPKGQWEAARVLGLSRAQTFTRVILPPALQRIYPALVSQCIIVMLGSSVVSQVSFEELTF 175

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               I ++T  + E+ L+    YL+LS+++   +     + 
Sbjct: 176 AANLIQSRTFLSFEVYLVTTLCYLALSMLMRQLLLLAGRRF 216


>gi|228477197|ref|ZP_04061835.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|228251216|gb|EEK10387.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
          Length = 225

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S VLG +  +  T  S     K  + L  +Y+    I      
Sbjct: 19  LQGLGVTIGISIVSVLLSLVLGTLFGIVMTSKS-----KIVRFLSRIYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G        +S  I  + +  A + ++VR  + ++PR 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGE-------LSAIIVFTLWGTAEMGDLVRGSITSLPRH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGLT+ +    V++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGRALGLTNGQLYTYVIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   ++     L  +
Sbjct: 182 IIDSNRLTIPTASFWIYGTILILYFAICYPVSKLSTYLENR 222



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + ++GTL G    S +K+V ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISIVSVLLSLVLGTLFGIVMTSKSKIVRFLSRIYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|209546900|ref|YP_002278818.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538144|gb|ACI58078.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 220

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 17/230 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    F        L    +++   A + V   VLG  L+L           K  +   +
Sbjct: 2   NYTFDFNAVSIAPLLQGLWVSLQLTAAVNVLGVVLGFGLALLIM-----SPIKVVRLPFM 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L++  F     P +V I     + +  P+L                   +AL     AF 
Sbjct: 57  LFVEFF--RCTPAIVQIV---WIFYCVPMLF-------DVFLDPMTMGIMALGLNLMAFN 104

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+ + AVPR Q++A IALGL   +    ++ P A R+ IP L +  + + + S+L 
Sbjct: 105 AEAYRASIQAVPREQLDAGIALGLNPLQRVLYIVFPTAFRASIPVLLTNGIVIFQQSALV 164

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   DL+  G T+  +T + IE   +   IY ++S  I   +  L  +
Sbjct: 165 AIVAIQDLMYQGKTLATETYRPIETFTVVALIYFAVSFPITQIVGLLERR 214



 Score = 36.8 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 2/160 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  L  +  +   ++G  +    +S  K+V     ++VE FR  P +V I ++
Sbjct: 15  LLQGLWVSLQLTAAVNVLGVVLGFGLALLIMSPIKVVRLPFMLFVEFFRCTPAIVQIVWI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FATR 206
           +  V  +  +    + +       N           +   +       GI L L      
Sbjct: 75  FYCVPMLFDVFLDPMTMGIMALGLNLMAFNAEAYRASIQAVPREQLDAGIALGLNPLQRV 134

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           L   F      ++P+L  +  +IF    LV I     L +
Sbjct: 135 LYIVFPTAFRASIPVLLTNGIVIFQQSALVAIVAIQDLMY 174


>gi|330969960|gb|EGH70026.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 197

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 13  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 59

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 60  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDALRALDFGPINAFRRIILPQALPF 119

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 120 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 179

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 180 WLVRRYEQH 188



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            ++   RLS  + + W   VYVEV R I  LV++F+L+  +               G+
Sbjct: 13  FVIALMRLSPFRALRWFATVYVEVLRGISALVLLFYLFFILPLFGIRLSPMTTGVLGL 70


>gi|257887403|ref|ZP_05667056.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257895895|ref|ZP_05675548.1| amino acid ABC transporter [Enterococcus faecium Com12]
 gi|257823457|gb|EEV50389.1| amino acid ABC transporter [Enterococcus faecium 1,141,733]
 gi|257832460|gb|EEV58881.1| amino acid ABC transporter [Enterococcus faecium Com12]
          Length = 209

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 18/217 (8%)

Query: 179 PTLTMDTNAKIFVFSFVLGIV-LSLFATRLSRHFHEKTGKALPLLYISTFL---IFGLPT 234
              ++    +  V++  +G V   L                LPL     F      G+P 
Sbjct: 1   MWTSLPFVLQGLVYTLGIGFVSFVLGNLVGLLLTVLGLLDWLPLNVFIRFYLSFFRGIPA 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVL+ L Y               G         +  I  +  ++AFI EI R  L  V  
Sbjct: 61  LVLLFLLY--------------FGLPYQLSALTASVICFTITSSAFIGEIYRGSLAGVSS 106

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ +A +A G +     + ++LPQA R  +P L++  ++L+K +SLA  +   ++     
Sbjct: 107 GQWDAGLASGFSFFGVLKYIVLPQAFRISVPALSNVAMDLVKGTSLAATITVPEIFQKAK 166

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I  +T     + ++   IY  + I I      L  +
Sbjct: 167 IIGGRTFDYFSLYILVALIYWIICIGIEKVQQYLEKR 203


>gi|86608410|ref|YP_477172.1| polar amino acid ABC transporter permease [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556952|gb|ABD01909.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 402

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 18/258 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +   +++  +L +        + P    +    LS   LT+   A   +  F +G++L+L
Sbjct: 160 LASIWVWALILPLCLELLLGNLGPNWPAVRTEQLSGLLLTLILAAAAMIIGFPIGVLLAL 219

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                      +  +ALP++ I   L+  L   V +       +         F  G   
Sbjct: 220 ----------GRANRALPVIRIFCTLVIELVRGVPLTTILFAAWLL-----VPFFLGGIS 264

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               +   +A   +TA ++AE VR GL ++P GQ+EAA ALGL   + T LV+LPQA+R+
Sbjct: 265 VNLIIRAEVAFILFTAVYVAEDVRGGLQSIPLGQLEAARALGLNPFQVTALVILPQALRA 324

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSI 379
            +P L +++L L K++SL   VG  DL+  G  +    N  G   E++     IY     
Sbjct: 325 AVPALVNEFLTLFKDTSLVFIVGLIDLLQAGRVVFTNPNWLGTQREVLFFIGLIYFICCF 384

Query: 380 MIALFMNRLNAKIALKEK 397
            +A    ++   + L ++
Sbjct: 385 AMAYAAQQVEKALGLGKR 402


>gi|288936937|ref|YP_003440996.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|288891646|gb|ADC59964.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 250

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 2/177 (1%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                +  PLL    F  F    L+ +A+K  ++ +         +   T  PEF+    
Sbjct: 62  WVSLFRNTPLLVQLLFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLT--PEFLCSMW 119

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L  +T+AF+ E + SGL AV  GQ EAA++ G T  +  R +LLPQ + +   P+  QY
Sbjct: 120 GLGVFTSAFLVEEIASGLRAVSHGQREAALSQGFTPWQELRFILLPQGLANAWQPIVGQY 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           LNL+K SSLA  +GFA+L      I +    A+E   +   +YL+L + + + + RL
Sbjct: 180 LNLMKLSSLASGIGFAELTYQVRQIESYNAHALEAFAVGTALYLALGVAMGVALTRL 236



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ T W++ +G++ AT++  L+ A RL   +    +   +V +FRN P LV +
Sbjct: 16  LQWIISGFLTTVWVSVAGILLATLLAVLLLALRLGGGRAGRGLVAAWVSLFRNTPLLVQL 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL----NNRGLSFPTLTMDTNAKIFVFSFVL 196
            F Y +  ++LP+    +V     +     N   L+   L       +F  +F++
Sbjct: 76  LFWYFAAWNLLPLAVKEVVNDEHAWSILPGNVWWLTPEFLCSMWGLGVFTSAFLV 130


>gi|163816015|ref|ZP_02207385.1| hypothetical protein COPEUT_02195 [Coprococcus eutactus ATCC 27759]
 gi|158448825|gb|EDP25820.1| hypothetical protein COPEUT_02195 [Coprococcus eutactus ATCC 27759]
 gi|295093671|emb|CBK82762.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Coprococcus sp. ART55/1]
          Length = 228

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 98/215 (45%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + +F LG++++L +    +           L+    +++ G P ++ + + Y  
Sbjct: 25  LFFVTLLGAFPLGLLIALGSMSKFKPLSY-------LMKFIVWIVRGTPLMIQLLIIYYF 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L   N + G      F++  ++     A + +EI R G+  +P GQ EA + LG
Sbjct: 78  ----PGLVFHNPVWGGGEGGRFVAASVSFIVNYACYFSEIYRGGIQGIPVGQEEAGLVLG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--- 361
           +T ++    V L Q ++ I+P ++++ + L+K++SLA  +   +++  G   +  +    
Sbjct: 134 MTPKQIFFKVKLLQMIKKIVPAMSNEIITLVKDTSLARIIALQEIIWAGQAFMKGSQGIS 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            AI  +    F YL  + ++ + + +L  K+    
Sbjct: 194 GAIWPLFFCAFYYLIWNGVLTVLLGKLEKKLDFFR 228



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  L F  ++ A  +G L+  G +S  K ++++ +  V + R  P ++ +  
Sbjct: 14  ALNTGFIQTLKLFFVTLLGAFPLGLLIALGSMSKFKPLSYLMKFIVWIVRGTPLMIQLLI 73

Query: 148 LYKSVLSVLPIPDH 161
           +Y     V   P  
Sbjct: 74  IYYFPGLVFHNPVW 87


>gi|111021336|ref|YP_704308.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
 gi|110820866|gb|ABG96150.1| ABC amino acid transporter, permease component [Rhodococcus jostii
           RHA1]
          Length = 214

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 22/207 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+      F+ S VLG+V++L      R                +  I   P +
Sbjct: 18  LEGFKITLIATVLGFLISVVLGLVIALIRQAAPRWVSVPV-------RAVSEFIRLTPLV 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y        L                   + L  + + ++AE+ R+G+ AVP G
Sbjct: 71  VQLLFVYYTFTGLSPLQI---------------GVVVLGIHYSTYMAEVYRAGIEAVPVG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA AL +   +  R ++LPQA+R ++P L +  +++ K++    A+   ++V+    
Sbjct: 116 QWEAARALSIAPTRTWRAIILPQAIRRVVPALGNYAVSMFKDTPFLFAITVVEMVTAAQQ 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIA 382
              +  Q +E + +   I+L  S   +
Sbjct: 176 FGARHFQYLEPLTLAGVIFLVASYPTS 202



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L GF  T      G + + ++G ++   R +A + V+   R   E  R  P +V + F
Sbjct: 16  VLLEGFKITLIATVLGFLISVVLGLVIALIRQAAPRWVSVPVRAVSEFIRLTPLVVQLLF 75

Query: 148 LYKSVLSVLP 157
           +Y +   + P
Sbjct: 76  VYYTFTGLSP 85


>gi|293608329|ref|ZP_06690632.1| predicted protein [Acinetobacter sp. SH024]
 gi|292828902|gb|EFF87264.1| predicted protein [Acinetobacter sp. SH024]
 gi|325121937|gb|ADY81460.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 280

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLP 233
              + T    F+ +F+LG +L +  T  ++      + + +  + +PL+    F  F  P
Sbjct: 56  FTMVWTAIIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFP 115

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                 L   L      +    +          +    AL  YTAA ++E +R+G+  V 
Sbjct: 116 E----FLPDSLSAGSGDVVAGGWWKNILNQQPAVIGVFALGLYTAARVSEHIRAGINTVS 171

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +  
Sbjct: 172 RGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 231

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 232 KTMREETSQDIIILILSTPVYLIITYSIKFVMAWIEKRMAV 272



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 3/117 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    ++   +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FR
Sbjct: 40  AYAEAPTWLQMLGSGVFTMVWTAIIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFR 99

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           NIP +V +FF        LP    +     G  +                 +F    
Sbjct: 100 NIPLIVQLFFWAFVFPEFLPDSLSAGS---GDVVAGGWWKNILNQQPAVIGVFALGL 153


>gi|15890239|ref|NP_355911.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158429|gb|AAK88696.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 221

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 14/215 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L            I + + V+G VL+ F   L R         + L Y   F   G   
Sbjct: 6   YLPMLWQGAVVTMTITLAALVVGTVLAFFFGIL-RVEGGPILSTVALCYTEVF--RGTSL 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV +   +  ++  P++                +  + L+ +   + AEIVR  L +V  
Sbjct: 63  LVQL---FWFYYALPLI--------GLSFDPVTTGVMVLAAHAGGYGAEIVRGALSSVSV 111

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+EAA AL  T  +    + LPQA+  ++P   +  +  LK SSL   +  ADL     
Sbjct: 112 QQLEAARALNFTRMQTLFRISLPQAVVEMMPAFGNLAIETLKLSSLVSLISIADLTFAAQ 171

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +I N T  +  I  I +  Y ++S+++ + +  + 
Sbjct: 172 SIRNLTLDSTSIYSITLLCYFAMSLILMVIIRVIE 206



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 33/71 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G V T  +  + ++  T++    G  R+    +++ +   Y EVFR    LV 
Sbjct: 6   YLPMLWQGAVVTMTITLAALVVGTVLAFFFGILRVEGGPILSTVALCYTEVFRGTSLLVQ 65

Query: 145 IFFLYKSVLSV 155
           +F+ Y ++  +
Sbjct: 66  LFWFYYALPLI 76


>gi|296156267|ref|ZP_06839106.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893773|gb|EFG73552.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 246

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 8/231 (3%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEK 214
           H +                 +T+  +A + V + +LG  L++      R        +  
Sbjct: 2   HLMNFWLDPRYLGWLAHGFLITLILSACVSVCATLLGFGLAMAQIAQQRSVAAAARLYVL 61

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             +  PLL    F  FG  TL+     +    + P +           S E  + ++ L+
Sbjct: 62  VFRNSPLLVQLLFWYFGAATLLP--QPWMTWLNTPHVLSAGPFALHWPSFELFAGWLGLT 119

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
           CY+ AFIAE  R+G+  V   Q +A  ALG+T   A R V+LPQA+R   PPL  QY+N+
Sbjct: 120 CYSTAFIAEEFRAGIRGVGIAQYQAGAALGMTRYTALRHVILPQAVRIATPPLAGQYMNI 179

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           +KNSSL +A+G A+L  +   +  ++ +  +       +Y+    +I + +
Sbjct: 180 VKNSSLTMAIGVAELSYMSRQVDTESFRTFQAFGTATVLYIGTIALIEIAL 230



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++ +  D  Y   +  GF+ T  L+    + AT++G  +   +++  + VA   R+YV 
Sbjct: 2   HLMNFWLDPRYLGWLAHGFLITLILSACVSVCATLLGFGLAMAQIAQQRSVAAAARLYVL 61

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           VFRN P LV + F Y    ++LP P  +       +LN   +              +F+ 
Sbjct: 62  VFRNSPLLVQLLFWYFGAATLLPQPWMT-------WLNTPHVLSAGPFALHWPSFELFAG 114

Query: 195 VLGI 198
            LG+
Sbjct: 115 WLGL 118


>gi|319405830|emb|CBI79462.1| ABC transporter, permease protein [Bartonella sp. AR 15-3]
          Length = 235

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 4/189 (2%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R  + K  + L   YI  F     P L  + L Y          Q   +     +  +  
Sbjct: 51  RVSNNKPLQYLARAYIYFF--RSSPLLAQLFLFYYGLGSLSSFWQQIGLWWFFQNAWYCC 108

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           L+I  S  ++A+ AEI R  L+AV   Q EA+ ALGL        ++ PQAM + + PL 
Sbjct: 109 LFI-FSLNSSAYQAEIFRGSLLAVATEQREASKALGLDRFTIFFKIIFPQAMVAALRPLG 167

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++++ + K+S++A  V   DL+     I ++T    ++ +    IYL +   I   +  +
Sbjct: 168 NEFILMTKSSAIASLVTVYDLMGTTKLIYSRTFD-FQVYVWAAIIYLIIVEFIHRVIILI 226

Query: 389 NAKIALKEK 397
              +    +
Sbjct: 227 EHYLTRYLR 235


>gi|167719669|ref|ZP_02402905.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei DM98]
          Length = 241

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 4/218 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKTG 216
            D  +   + M+L    L    L++       +  F L I       + R +   +    
Sbjct: 1   MDAWLAPKYLMWLWQGFLLTLGLSLAAAVMATLAGFALAIARHAKRASPRRAAAAYVVAF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    F  FG+  L+       L  + P       +     S EF++ ++ LS Y
Sbjct: 61  RNTPLVVQLLFWYFGVAALLPEPAMAWL--NAPHALDVGGLALRWPSFEFVAGWLGLSGY 118

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+AF+AE  ++GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+K
Sbjct: 119 TSAFVAEEFQAGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLIK 178

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           NSSL +A+G A+L      +  +T +      +   +Y
Sbjct: 179 NSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLY 216



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 35/79 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 9   YLMWLWQGFLLTLGLSLAAAVMATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V ++LP P  + 
Sbjct: 69  LLFWYFGVAALLPEPAMAW 87


>gi|76801537|ref|YP_326545.1| glutamine/glutamate/polar amino acids ABC transporter permease
           [Natronomonas pharaonis DSM 2160]
 gi|76557402|emb|CAI48979.1| ABC-type transport system permease protein II 1 (probable
           substrates glutamine/glutamate/polar amino acids)
           [Natronomonas pharaonis DSM 2160]
          Length = 262

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 9/259 (3%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI-- 198
           PL +    ++     L   D   V      L    L    LT+ +    F+  F  G   
Sbjct: 3   PLALQATDWQFAWVTLQTTDWQFVWENRAILLQGFLVTVLLTLVSVLLGFLAGFPAGAIE 62

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V      R +        +  P++ +     FGLP    +     + F    LG      
Sbjct: 63  VYGRGPLRSAVRTVGVLLRGTPIVVLMVLFFFGLP----LPDPGDITFSSITLGNTTIPE 118

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
            S     F +  +AL   +AA+ +++ R  + ++  GQ+ AA ++GL+  +A R V++PQ
Sbjct: 119 FSVGFEAFFAAMLALGLRSAAYQSQVFRGAIQSIDEGQVAAARSVGLSKYEAIRHVVVPQ 178

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYL 375
           A+R  +P   +++  +LK++S+A A+G A+L++ G  +  Q GQ+   +E+IL    IY 
Sbjct: 179 ALRRSVPGFQNEFTIVLKDTSIAFAIGLAELLTRGYDLFTQPGQSTAVLEVILAVSLIYF 238

Query: 376 SLSIMIALFMNRLNAKIAL 394
            L+      ++ L+   A+
Sbjct: 239 VLTFTTNRALDALSDYYAI 257


>gi|255321555|ref|ZP_05362713.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter showae RM3277]
 gi|255301411|gb|EET80670.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter showae RM3277]
          Length = 217

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+ ++  +L +V+ +F T L + +  K    +   YI   +    P L+ +   Y    
Sbjct: 21  VKLSLYGILLSLVIGIFCT-LVKFYKVKILMPIVNGYIE--VSRNTPLLIQLFFLYY--- 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                              F      L+    +++AE  R G  AV + Q+EAA+++ LT
Sbjct: 75  --------GLSKFGLNLSAFTCAVAGLAFLGGSYMAESFRLGFEAVKKTQIEAALSVALT 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQA    IP + +  + L+K +S+   +   DLV     II       E 
Sbjct: 127 QGQILRYVILPQAFSVSIPSIAANVIFLIKETSVISIIALPDLVYATKDIIGLYYMTDEA 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + + +  YL + + I+L +  L  ++ +  
Sbjct: 187 LFMLVVSYLIIILPISLVLFWLEKRMRVGR 216



 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           T  L+  G++ + +IG      +    K++  I   Y+EV RN P L+ +FFLY  +
Sbjct: 20  TVKLSLYGILLSLVIGIFCTLVKFYKVKILMPIVNGYIEVSRNTPLLIQLFFLYYGL 76


>gi|126667700|ref|ZP_01738668.1| amino acid ABC transporter, permease protein [Marinobacter sp.
           ELB17]
 gi|126627803|gb|EAZ98432.1| amino acid ABC transporter, permease protein [Marinobacter sp.
           ELB17]
          Length = 218

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 90/229 (39%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     + +    +    +T+D +A+   F F +   L        + F     +     
Sbjct: 1   MDFNLMVEVTPLLIEAAWVTIDVSARSMFFGFFVACGLVFL-----QSFRFAPIRWFARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YIS  ++ G P  V + L +                G  + P    +++  +    A+++
Sbjct: 56  YIS--VVRGTPYFVQLLLVFYGGPSI----------GVRLDPITCGVFVG-AFNIGAYMS 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R  + +V  GQ EAA ++G    +    ++LPQA   +I  +    + L+KNSSL  
Sbjct: 103 EAIRGSIESVDSGQTEAARSVGFGKVQTMVSIVLPQAAPLMIRSVGVLAIVLVKNSSLVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L      +I  T + +EI  +   +Y+ +   +   +     +
Sbjct: 163 IISVVELTYQAQRLIGSTYKPLEIFTLSALMYIVIVYAVMGIIELAYRR 211


>gi|107022812|ref|YP_621139.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|105893001|gb|ABF76166.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia cenocepacia AU 1054]
          Length = 255

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             S +LG+ L+L A       R S        +  PLL     L +G   +V        
Sbjct: 32  AASVLLGVPLALAAGARHTPLRWSARGWLMLIRGTPLLVQLYLLYYGFGQIV-------- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P     +      +   F    +ALS   +A++A I+R  +  VP G++EA  A G
Sbjct: 84  ----PREWMRDSWASPLLRDAFWYAIVALSVNESAYVATILRGAIAGVPAGEIEAGHAYG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++ P+A R  +P LT + + LLK++ LA  V   D++    T+  +T +  
Sbjct: 140 MTRTQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVMGTANTLRFETLRVY 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E +     +Y+ L  ++ +   RL  +I   
Sbjct: 200 EPLAGAAIVYVVLVALLTIPAARLEQRINRY 230


>gi|330951202|gb|EGH51462.1| amino acid ABC transporter permease [Pseudomonas syringae Cit 7]
          Length = 221

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++     +LG+ L +    + R +  +    +  +Y+   LI   P LV +   +    
Sbjct: 25  LELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE--LIRNTPFLVQLFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          E+ +  +A+     A+  EIVR+G+ A+P+GQ+EA+ AL + 
Sbjct: 78  -------FGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAIPKGQLEASAALAMN 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+L  A+  + P L+SQ + ++  SS+   +   +L      I ++  ++ E 
Sbjct: 131 RYEAFRHVVLVPALGKVWPALSSQIIIVMLGSSVCSQIATEELSFFANFIQSRNFRSFET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++   IYL+++++I   +  +  + 
Sbjct: 191 YIVTTLIYLAMALLIRQLLAWIGRRY 216



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQSIDLLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAI 116


>gi|328886197|emb|CCA59436.1| amino acid ABC transporter, permease protein [Streptomyces
           venezuelae ATCC 10712]
          Length = 214

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++  L +VL        R     + +    ++++      L  L      + +  
Sbjct: 19  VELTVYASALALVLGFLMASF-RVAPVGSFRVFGTVWVTVLRNTPLTLL-----FFAVML 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P            V P  +   +AL CYT+AFI E +RSG+  VPRGQ EAA +LG+T
Sbjct: 73  GLP--------RFGLVLPFELFAVLALGCYTSAFICEALRSGINTVPRGQGEAARSLGMT 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA R++IPP+ S  + L KNS++A A    +L+    T+       +  
Sbjct: 125 FSQTLGTVVLPQAFRTVIPPIGSTLIALAKNSAIAGAFSVTELLGTYKTLSELGYNIVWT 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+   N L  +  +  
Sbjct: 185 FVWIAVGYLIITLGISALFNVLEKRWGVAR 214



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L       A ++G L+ + R++          V+V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASALALVLGFLMASFRVAPVGSFRVFGTVWVTVLRNTPLTLLFFAVMLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|218458286|ref|ZP_03498377.1| ABC transporter, membrane spanning protein [Rhizobium etli Kim 5]
          Length = 204

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 7/209 (3%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +VF  ++G+  +    + SR         + LL   T  +  +P L+LI   Y    D  
Sbjct: 1   YVFGILIGLTGATGKLKGSRA-------VVTLLDFYTTAVRAIPELILIIGLYYAGTDGI 53

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                     S     F++  + L     A++ E++R  ++A+P GQ+EAA A G+    
Sbjct: 54  NRMLSTLGFPSIEINGFLAAVVVLGIVQGAYMIEVLRGAILAIPIGQIEAASAFGMRPWL 113

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+LP  M + +P + + ++++ K+S+L   VG+ +L          T       L 
Sbjct: 114 RFRRVVLPALMPNALPGMANLWMSVTKDSALIAVVGYQELALATRLAAGNTKHYFLFFLA 173

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +YL+++++  +    L       + K
Sbjct: 174 AAVLYLAITLVSNVVFGGLETHFRRGQPK 202


>gi|260555282|ref|ZP_05827503.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC
           19606]
 gi|260411824|gb|EEX05121.1| glutamate/aspartate transporter [Acinetobacter baumannii ATCC
           19606]
          Length = 280

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLP 233
              + T    F+ +F+LG +L +  T  ++      + + +  + +PL+    F  F  P
Sbjct: 56  FTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFP 115

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                 L   L      +    +          +    AL  YTAA ++E VR+G+  V 
Sbjct: 116 E----FLPDSLSAGSGDVVAGGWWKNILNQQPAIIGVFALGLYTAARVSEHVRAGINTVS 171

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +  
Sbjct: 172 RGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 231

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 232 KTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKRMAV 272



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 3/117 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    ++   +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FR
Sbjct: 40  AYAEAPTWLQMLGSGVFTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFR 99

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           NIP +V +FF        LP    +     G  +                 +F    
Sbjct: 100 NIPLIVQLFFWAFVFPEFLPDSLSAGS---GDVVAGGWWKNILNQQPAIIGVFALGL 153


>gi|194397718|ref|YP_002037266.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194357385|gb|ACF55833.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
          Length = 219

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|15888715|ref|NP_354396.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15156457|gb|AAK87181.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 223

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 14/223 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F               +    ++     VLGI L +F     R    K  +     
Sbjct: 1   MKYTFDFGWLLEYYPQIAKGIAITLELIAIGGVLGIALGIF-CAWVRALGPKWLRPPVAT 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  IA+     A+  
Sbjct: 60  YVELIRNTPFLI-------------QLFFIFFGLPSLGLQLSELSAANIAMVVNLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I P L+SQ + ++  SS+  
Sbjct: 107 EIIRAGIQATPKGQFEAGASLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +   DL      I ++T +A E  ++   IYL L+I++   +
Sbjct: 167 QIAAEDLTFAANFIQSRTFRAFEAYMVSTVIYLVLAILLRQLL 209


>gi|315168385|gb|EFU12402.1| ABC transporter, permease protein [Enterococcus faecalis TX1341]
          Length = 221

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 4/159 (2%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L ++  ++  + P L     I          +  ++ + +T A +AEI+R GL  V +G
Sbjct: 57  LLASIYVEVVRNIPNLLWIYVIFLIFKIKSTPAGIVSFTVFTTAALAEIIRGGLNGVDKG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q+EAA + G ++ +    ++LPQA+R+++P + SQ++ ++K++S L   +   +L     
Sbjct: 117 QIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSY 176

Query: 355 TI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +     QTGQ   I  I   IY  ++  I+ F   L+ 
Sbjct: 177 ILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSR 215



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+ I
Sbjct: 16  FQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWI 75

Query: 146 FFLYKSV 152
           + ++   
Sbjct: 76  YVIFLIF 82


>gi|229820932|ref|YP_002882458.1| polar amino acid ABC transporter, inner membrane subunit
           [Beutenbergia cavernae DSM 12333]
 gi|229566845|gb|ACQ80696.1| polar amino acid ABC transporter, inner membrane subunit
           [Beutenbergia cavernae DSM 12333]
          Length = 294

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 113/253 (44%), Gaps = 11/253 (4%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L++       +  +             +F +   L+F    +       +++ VL +  
Sbjct: 27  ILLLAGIAVVVLTRLGEKGQLDPDKWLPLFTSRSWLNFFLPGLQNTLVAALYAIVLALAF 86

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            L    L R       + +    +  F       ++++ +   L      +   + +   
Sbjct: 87  GLLFG-LGRLAPLAPVRWVCGTVVEFFRAVP---VLMMMIVIYLGLGFSRVVDASLV--- 139

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 +++   L+ Y  A IAE+VRSG+  +PRGQ EAA A+G+TH ++ R+V LPQA+
Sbjct: 140 ----PLIAVVGGLTLYNGAVIAELVRSGVFGLPRGQKEAAYAVGMTHGQSLRVVELPQAL 195

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
            +++P L SQ++ +LK+S+L   V + +L+     +    G  ++ +L    I++ ++ +
Sbjct: 196 LAMLPSLVSQFVVILKDSALGSWVTYGELLQFSRQLGTSDGNLLQTLLTAAVIFIVINYV 255

Query: 381 IALFMNRLNAKIA 393
           +      L ++I+
Sbjct: 256 LTRAAQYLASRIS 268



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 37/77 (48%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            +P  +  S+    L G  NT   A   ++ A   G L G GRL+    V W+C   VE 
Sbjct: 52  WLPLFTSRSWLNFFLPGLQNTLVAALYAIVLALAFGLLFGLGRLAPLAPVRWVCGTVVEF 111

Query: 136 FRNIPPLVVIFFLYKSV 152
           FR +P L+++  +Y  +
Sbjct: 112 FRAVPVLMMMIVIYLGL 128


>gi|163868658|ref|YP_001609867.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella tribocorum CIP 105476]
 gi|161018314|emb|CAK01872.1| glutamate/aspartate transport system permease protein GltJ
           [Bartonella tribocorum CIP 105476]
          Length = 250

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+  +    + +   G+++    T           + L  L++   ++  +P L
Sbjct: 34  LDGFKNTVILSITSLILAIFCGVIIGTMRTLPKTSIINCVCRTLGALWVE--IMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +      + +  AL  +T+A IAE VRSG+ A+  G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAMKFSPILLITCALGFFTSARIAEQVRSGIEAISSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G T  ++ R ++LP+A+R+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFTTYQSYRYIILPRAIRAIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  L+   +Y+ +++ + + M  +   + +
Sbjct: 204 AIEEISHVYENYLLVTILYIFIALCVFIVMTVIEQMLKI 242



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV-----AWICRVYVEVF 136
             +Y   +L GF NT  L+ + +I A   G ++G  R      +       +  ++VE+ 
Sbjct: 26  SHTYLDTLLDGFKNTVILSITSLILAIFCGVIIGTMRTLPKTSIINCVCRTLGALWVEIM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIP 159
           RNIP LV +F  Y  V  + P  
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPA 108


>gi|49475802|ref|YP_033843.1| amino acid permease [Bartonella henselae str. Houston-1]
 gi|49238609|emb|CAF27850.1| Amino acid permease [Bartonella henselae str. Houston-1]
          Length = 250

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T   +    + +  LG+++    T  +      + + +   YI   ++  +P L
Sbjct: 34  LESLKNTFVLSISSLILAIFLGVIVGTMRTLPNTSMTNCSFRTI--GYIWVEVMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +      + +  AL  +T+A IAE VRSG+ A+  G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAINYSPILLITCALGFFTSARIAEQVRSGIEAISSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G T  +  R ++LP+AMR+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFTTYQIYRYIILPRAMRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  LI   +Y+ +++ I + M  +   + +
Sbjct: 204 TIEEMSHVYENYLIVTILYIFIALFIFIIMTVIEQMLKI 242



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV-----AWICRVYVEVF 136
             +Y   +L    NTF L+ S +I A  +G +VG  R   N  +       I  ++VEV 
Sbjct: 26  SHTYLDTLLESLKNTFVLSISSLILAIFLGVIVGTMRTLPNTSMTNCSFRTIGYIWVEVM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIP 159
           RNIP LV +F  Y  V  + P  
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPA 108


>gi|300718268|ref|YP_003743071.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia
           billingiae Eb661]
 gi|299064104|emb|CAX61224.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia
           billingiae Eb661]
          Length = 268

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 14/239 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
               +     +L  G            L +  +      S V G++L L      R    
Sbjct: 35  EWHQVWLRLPLLLTGSQQGWPWSGGFVLNIYISIVSMALSTVFGLLLGLAMMAKRRWL-- 92

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
               +LP   +  FL      ++L ++ Y L +        +  G S          + L
Sbjct: 93  ----SLPARALMNFLRNAPWLVLLFSMLYLLPYHA------SLFGISFTFSPLFKAIVGL 142

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S  TAA  AE++R  + +V  GQ E+A ++G ++ +  RLV+LPQA R IIP   + Y  
Sbjct: 143 SLPTAANFAEVIRGAVQSVHSGQWESARSMGYSYWQIYRLVILPQAFRRIIPGWMNLYAL 202

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL--IWMFIYLSLSIMIALFMNRLNA 390
           L  +++LA   G  ++V++  T +   G++  +      + ++      IAL   RL  
Sbjct: 203 LTISTALATVTGVQEVVTLLRTTLATEGESTLVYFYVTVLLMFFFYCYPIALLARRLEK 261


>gi|146306127|ref|YP_001186592.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145574328|gb|ABP83860.1| L-ornithine ABC transporter membrane protein / L-arginine ABC
           transporter membrane protein [Pseudomonas mendocina ymp]
          Length = 229

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 93/216 (43%), Gaps = 6/216 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + S  L I+L L    L R    +    L   Y    LI G+P LVLI L + 
Sbjct: 14  WLTLTLALCSMALAILLGLTGAAL-RLSPLRWLANLGDAY--ATLIRGIPDLVLILLIFY 70

Query: 244 LHFDKP--VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
              D    +     +     ++P F++    +     A+++E  R   +A+ +GQ EA  
Sbjct: 71  GGQDLVNRIAPSLGYTAYIDINP-FVAGVFTMGFIFGAYLSETFRGAFMAIAKGQAEAGA 129

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           A G++  +    +L+PQ +R  IP  T+ +L L K ++L   VG  D++       + T 
Sbjct: 130 AYGMSSAQVFFRILVPQMIRFAIPGFTNNWLVLTKATALISVVGLQDMMFKAKNAADATR 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     L    +YL L+ +  L +  +  + ++  +
Sbjct: 190 EPFTFYLAVAALYLLLTSVSLLALRAVERRYSVGTR 225



 Score = 41.5 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 11/117 (9%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I+ G   T  LA   M  A ++G    A RLS  + +A +   Y  + R IP LV+
Sbjct: 5   YGPIIVEGAWLTLTLALCSMALAILLGLTGAALRLSPLRWLANLGDAYATLIRGIPDLVL 64

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           I  ++     ++     S+     + +N              A +F   F+ G  LS
Sbjct: 65  ILLIFYGGQDLVNRIAPSLGYTAYIDINPFV-----------AGVFTMGFIFGAYLS 110


>gi|320010632|gb|ADW05482.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Streptomyces flavogriseus ATCC 33331]
          Length = 244

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              G    + +   + L++  P L  +            +   +A      A+ +EIVR 
Sbjct: 61  FFRGTSLYIQL---FWLYYAMPQLTGYEL-------TPLLCGVVAFGLNYGAYGSEIVRG 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + +VPR Q EAA+AL +T     R V++PQA   +IP  T+  + LLK + L   +  A
Sbjct: 111 AINSVPRAQYEAAVALNMTPLHRMRKVIMPQAWVQMIPSFTNLLIQLLKCTPLLWLISAA 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           D ++    I + TG+ +   L+ + +Y  L+  + L MN L      +
Sbjct: 171 DFMTTIEHIRSLTGETLTAYLLLLAVYFVLAYTLTLLMNLLERSAKRR 218


>gi|15597398|ref|NP_250892.1| amino acid permease [Pseudomonas aeruginosa PAO1]
 gi|107101629|ref|ZP_01365547.1| hypothetical protein PaerPA_01002673 [Pseudomonas aeruginosa PACS2]
 gi|218891845|ref|YP_002440712.1| putative amino acid permease [Pseudomonas aeruginosa LESB58]
 gi|254235228|ref|ZP_04928551.1| hypothetical protein PACG_01119 [Pseudomonas aeruginosa C3719]
 gi|254240624|ref|ZP_04933946.1| hypothetical protein PA2G_01283 [Pseudomonas aeruginosa 2192]
 gi|9948224|gb|AAG05590.1|AE004646_11 probable amino acid permease [Pseudomonas aeruginosa PAO1]
 gi|126167159|gb|EAZ52670.1| hypothetical protein PACG_01119 [Pseudomonas aeruginosa C3719]
 gi|126194002|gb|EAZ58065.1| hypothetical protein PA2G_01283 [Pseudomonas aeruginosa 2192]
 gi|218772071|emb|CAW27850.1| probable amino acid permease [Pseudomonas aeruginosa LESB58]
          Length = 225

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 22/192 (11%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   VLG+ L++             GK   LL         +P L    L +  +F  P+
Sbjct: 42  VLGLVLGVALAVL-----------PGKPRLLLVALLGFFRAIPVL---MLIFWTYFLLPI 87

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +   +        P   ++  ALS    A++A  V +G+ ++P GQ  AA ALGL   + 
Sbjct: 88  VFHVDV-------PALATVVCALSLIGGAYLAHSVYAGIHSLPAGQWAAARALGLRPWQV 140

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILI 369
            RLV+LPQA+  ++P   +Q+++L+K++SLA  +G  +L  V   + N+      EI L 
Sbjct: 141 LRLVILPQALPVMLPSFLNQWVSLIKDTSLAYVIGVGELSFVATQVSNRVMVHPTEIFLF 200

Query: 370 WMFIYLSLSIMI 381
              +Y  L   +
Sbjct: 201 VALLYFLLCTSL 212


>gi|284992300|ref|YP_003410854.1| polar amino acid ABC transporter inner membrane subunit
           [Geodermatophilus obscurus DSM 43160]
 gi|284065545|gb|ADB76483.1| polar amino acid ABC transporter, inner membrane subunit
           [Geodermatophilus obscurus DSM 43160]
          Length = 215

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 14/189 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + L   Y+ TF    L T+V   + + L        Q +F+ G      F  
Sbjct: 40  RVSPIPPLRGLATFYVETFRNTPL-TVVFFFIIFGLP-------QIDFVIGF-----FPG 86

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +++  YTAAF+ E VRSG+ AV  GQ EAA ALGLT  +A R V+LPQA R+++PPL 
Sbjct: 87  AVLSVGLYTAAFVCEAVRSGVNAVSGGQAEAARALGLTFGQALREVVLPQAFRTVVPPLG 146

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVG-GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           +  + ++KN+S+A     +DL S+    +    G    +++  +  Y+ +++  AL +N+
Sbjct: 147 NVLIAMVKNTSIAAGFSVSDLSSLLPRLVNADAGDLTLVLVGVVVGYMVITLPSALAVNQ 206

Query: 388 LNAKIALKE 396
           +  ++A+  
Sbjct: 207 IERRVAILR 215



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 35/75 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L  F+ T  L+    + A ++GTL+ A R+S    +  +   YVE FRN P  VV FF+
Sbjct: 11  FLDAFLTTLGLSLLAGLLALVLGTLLAAMRVSPIPPLRGLATFYVETFRNTPLTVVFFFI 70

Query: 149 YKSVLSVLPIPDHSI 163
              +  +  +     
Sbjct: 71  IFGLPQIDFVIGFFP 85


>gi|124022921|ref|YP_001017228.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           MIT 9303]
 gi|123963207|gb|ABM77963.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9303]
          Length = 297

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 115/237 (48%), Gaps = 16/237 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+        +    P        P     ++       +    + K+ +   VL  V+ 
Sbjct: 32  LIRTDMGLSFLWLGRPAGFALAEHPLSYRPSDSYAWALCMGWLNSLKVILCGLVLATVIG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG--- 258
           + A   +R       +AL   Y+   LI  +P L+ +   Y + F          +G   
Sbjct: 92  VLAGA-ARSSSNLLLRALSSGYV--ALIRQIPLLLQLLFWYFVAFLSLSGTPLAPLGALI 148

Query: 259 ----------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                     G  +S EF +L + LS +TAA IAEIVR GL +VP GQ EA  +LGL   
Sbjct: 149 RVSNQGIELLGLNLSVEFSALLVGLSIFTAASIAEIVRGGLNSVPSGQWEAFRSLGLPEG 208

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              R V+LPQA+ +I+P LTSQYLNL KNS+LA+AVG+AD+ +V  T I QTG+AIE
Sbjct: 209 FGLRRVVLPQALPAILPGLTSQYLNLAKNSTLAIAVGYADVYAVSDTTITQTGRAIE 265



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 6/204 (2%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R  +  +Q+ +AL L  I    +NN+  N+ ++++ L   +L   AGF + +  + Y   
Sbjct: 3   RSQHFCLQVGVALALLTILGVLINNLAVNLIRTDMGLSFLWLGRPAGFALAEHPLSYRPS 62

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SYA A+ +G++N+  +   G++ AT+IG L GA R S+N L+  +   YV + R IP L
Sbjct: 63  DSYAWALCMGWLNSLKVILCGLVLATVIGVLAGAARSSSNLLLRALSSGYVALIRQIPLL 122

Query: 143 VVIFFLYKSVLSV------LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           + + F Y             P+     V   G+ L    LS     +     IF  + + 
Sbjct: 123 LQLLFWYFVAFLSLSGTPLAPLGALIRVSNQGIELLGLNLSVEFSALLVGLSIFTAASIA 182

Query: 197 GIVLSLFATRLSRHFHEKTGKALP 220
            IV     +  S  +       LP
Sbjct: 183 EIVRGGLNSVPSGQWEAFRSLGLP 206


>gi|302336263|ref|YP_003801470.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Olsenella uli DSM 7084]
 gi|301320103|gb|ADK68590.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Olsenella uli DSM 7084]
          Length = 280

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 91/226 (40%), Gaps = 14/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F      +F         ++ + + ++ I L      L R    +    L  + I+
Sbjct: 55  FWAFFARPTTWAFLFQGFLGTMEVSLTAGLIAIALGFVLM-LGRVSGSRILGGLCRVVIN 113

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F       L+         +                 P F  + + +    +  +AE+ 
Sbjct: 114 FFRGVPSLLLIYFFFMVVPQYG-------------VRMPSFWMITLPVGLAASGVLAEVF 160

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AVP+GQ EAA +LG+   K    ++ PQA+R +IP L SQ + ++K++++A  V 
Sbjct: 161 RAGVNAVPQGQSEAAYSLGMRRMKVMFKIVFPQAVRYVIPSLISQLVVVVKDTTVAYVVS 220

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + D++     +I+     +    +   IY+ L+  I      +  +
Sbjct: 221 YPDMLQNARVLISNYSALVSTYFVVAIIYILLNYAINQAAIAVARR 266



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 45/92 (48%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + +  +    +  GF+ T  ++ +  + A  +G ++  GR+S ++++  +CRV +  FR
Sbjct: 57  AFFARPTTWAFLFQGFLGTMEVSLTAGLIAIALGFVLMLGRVSGSRILGGLCRVVINFFR 116

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            +P L++I+F +  V           ++   +
Sbjct: 117 GVPSLLLIYFFFMVVPQYGVRMPSFWMITLPV 148


>gi|225860689|ref|YP_002742198.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229177|ref|ZP_06962858.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255599|ref|ZP_06979185.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502497|ref|YP_003724437.1| amino acid ABC superfamily transporter permease [Streptococcus
           pneumoniae TCH8431/19A]
 gi|225726493|gb|ACO22344.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238092|gb|ADI69223.1| amino acid ABC superfamily ATP binding cassette transporter
           permease [Streptococcus pneumoniae TCH8431/19A]
 gi|327390246|gb|EGE88588.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 226

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANIIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRLR 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|218517086|ref|ZP_03513926.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 170

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 11/179 (6%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           AL    I   +I  LP LVL+   +           F          +  S  + LS Y+
Sbjct: 3   ALVPARIYVTVIRNLPILVLVLFAF-----------FALPQMGLRLDKMKSFVLVLSLYS 51

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A++AE+ R+GL+++PRG  EA +A+GLT  +    ++ P  +R+++P L+S  ++L K+
Sbjct: 52  GAYLAEVFRAGLLSIPRGLTEAGLAIGLTGMQIRSSIIAPLMLRNVLPSLSSTIISLFKD 111

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +SLA A+   +L      I  ++ + IE  ++   +Y++   +IA  M  +  ++AL  
Sbjct: 112 TSLAAAIAVPELTFAARKINVESFRVIETWMVTSALYVATCFLIAALMRLVERRLALPR 170


>gi|168482935|ref|ZP_02707887.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1873-00]
 gi|172043646|gb|EDT51692.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1873-00]
          Length = 226

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 18/208 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVELPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              + + +  YL + + I+L  + +  +
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERR 211



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|293391347|ref|ZP_06635681.1| arginine transport system permease protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951881|gb|EFE02000.1| arginine transport system permease protein [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 228

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 97/228 (42%), Gaps = 6/228 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            +    LS     + T+  + V S  +          +      K  K+   LY++ F  
Sbjct: 1   MMFQEYLSIIAQGIPTSLLLTVVSLAIAF-FLALVLTVLLAMGNKAVKSAVNLYLTLFT- 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P LV   L Y            N    S +S  +    +AL+  +AA+  ++    +
Sbjct: 59  -GTPLLVQFFLIYAGP--GQFQWIVNSPLWSVLSNAWFCAALALALNSAAYSTQLFHGAV 115

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+P+GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K ++LA  +   D+
Sbjct: 116 KAIPKGQWESCEALGLSRFQTL-KILIPYALKRALPSYSNEIILVFKGTALASTITIMDI 174

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +     +      A+ I  I   IYL ++ +  L + RL  K+   E+
Sbjct: 175 MGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRRLENKVLAFER 222


>gi|221231514|ref|YP_002510666.1| putative amino-acid ABC transporter integral membrane protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225854222|ref|YP_002735734.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
 gi|220673974|emb|CAR68484.1| putative amino-acid ABC transporter integral membrane protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225722358|gb|ACO18211.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae JJA]
          Length = 206

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 18/211 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y
Sbjct: 1   MHIAVWGILGSFLLGLIVSII-----RHYRILVLSQVATAYIE--LSRNTPLLIQLFFLY 53

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F       V    +   + L     +++AE  RSGL A+ + Q E  +A
Sbjct: 54  -----------FGLPRIGIVLSSEVCATLGLVFLGDSYMAESFRSGLEAISQTQQEIGLA 102

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    +
Sbjct: 103 IGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYE 162

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               + + +  YL + + I+L  + +  ++ 
Sbjct: 163 TDIALAMLVVAYLIMLLPISLVFSWIERRLR 193



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 38/91 (41%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ + ++G +V   R     +++ +   Y+E+ RN P L+ +FFLY  +  +  +
Sbjct: 3   IAVWGILGSFLLGLIVSIIRHYRILVLSQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV 62

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
               +    G+          +      A  
Sbjct: 63  LSSEVCATLGLVFLGDSYMAESFRSGLEAIS 93


>gi|119945246|ref|YP_942926.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
 gi|119863850|gb|ABM03327.1| ABC polar amino acid transporter inner membrane protein
           [Psychromonas ingrahamii 37]
          Length = 216

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 14/208 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V + V+G +L L    L R    K+   +   ++       L   +++   Y    
Sbjct: 23  IYISVVAIVIGTILGLLIGFL-RAESNKSVNLVLGGFLDILRSVPLIIQLILFSTYVGAM 81

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+               F++  I LS YT AF++E+ RSG  +VP     A+ +LG+T
Sbjct: 82  GHPL-------------SPFIAGSIILSLYTMAFMSEVFRSGFDSVPTSMRTASRSLGMT 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           + +    + +P  MR++ P      L+++K+S+L   +G+ +L+  G  +I++T + + I
Sbjct: 129 YLQTVIHIRVPIGMRAVFPSWLGVALSVIKDSALVSVIGYMELLRTGEQLISRTQEPLMI 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           ++     Y  +S  ++ +   +  K+A+
Sbjct: 189 LIGIGLFYFMISYPLSRYGKHVERKMAI 216



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 38/70 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G +NT +++   ++  TI+G L+G  R  +NK V  +   ++++ R++P ++ +   
Sbjct: 15  ILTGILNTIYISVVAIVIGTILGLLIGFLRAESNKSVNLVLGGFLDILRSVPLIIQLILF 74

Query: 149 YKSVLSVLPI 158
              V ++   
Sbjct: 75  STYVGAMGHP 84


>gi|325293282|ref|YP_004279146.1| Inner membrane arginine ABC transporter permease protein
           [Agrobacterium sp. H13-3]
 gi|325061135|gb|ADY64826.1| Inner membrane arginine ABC transporter permease protein
           [Agrobacterium sp. H13-3]
          Length = 267

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 2/186 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + + +  +G+V+  F   L+    EK+ +    +Y + F       L L  + Y +
Sbjct: 55  VTISLALATLPVGLVIG-FLIALAAQSEEKSLRLAAGVYTTIFRGL-PELLTLFIVYYGI 112

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    +  I G      F++  +ALS   +++ +E++ S   A+P+GQ EA  ALG
Sbjct: 113 QMLLQSAAGYVGITGPVEINAFVAGMVALSVVFSSYSSEVLLSAFKAIPKGQYEAGHALG 172

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+      LV++PQ +R  +P +T+ ++ LLK++S    +G AD+V   G     + +A 
Sbjct: 173 LSRGHTMVLVIIPQLVRIALPGMTNLWVILLKDTSYVSIIGLADIVRQTGIAARVSKEAF 232

Query: 365 EIILIW 370
               I 
Sbjct: 233 FFYGIA 238



 Score = 39.5 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 8/197 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   I  G   T  LA + +    +IG L+     S  K +     VY  +FR +P L+ 
Sbjct: 45  WGDEIAFGVKVTISLALATLPVGLVIGFLIALAAQSEEKSLRLAAGVYTTIFRGLPELLT 104

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F +Y  +  +L      + +   + +N              A   VFS     VL L A
Sbjct: 105 LFIVYYGIQMLLQSAAGYVGITGPVEIN-------AFVAGMVALSVVFSSYSSEVL-LSA 156

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            +       + G AL L    T ++  +P LV IAL    +    +L   +++    ++ 
Sbjct: 157 FKAIPKGQYEAGHALGLSRGHTMVLVIIPQLVRIALPGMTNLWVILLKDTSYVSIIGLAD 216

Query: 265 EFMSLYIALSCYTAAFI 281
                 IA      AF 
Sbjct: 217 IVRQTGIAARVSKEAFF 233


>gi|167836673|ref|ZP_02463556.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis MSMB43]
          Length = 241

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 4/235 (1%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKTG 216
            D  +   + M+L    L    L+        +  F L I         R +   +    
Sbjct: 1   MDAWLAPKYLMWLWQGFLLTLGLSFAAAVAATLAGFALAIARHAKRAWPRRAAAAYVVAF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    F  FG+ +L+   +   L  +         +     S EF++ ++ LSCY
Sbjct: 61  RNTPLVVQLLFWYFGVASLLPEPVMAWL--NARHAAALGGVELHWPSFEFVAGWVGLSCY 118

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+AF+AE  ++GL  VP  Q  AA ALGL+  +  R V+LPQA+R  +PPL  QY+NL+K
Sbjct: 119 TSAFVAEEFQAGLRGVPAAQHHAASALGLSPLQTFRFVVLPQAVRIALPPLFGQYMNLIK 178

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           NSSL +A+G A+L      +  +T +      +   +Y++    +  F      +
Sbjct: 179 NSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYIAAVAAVEAFAQWTVRR 233



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 36/79 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+F+  + AT+ G  +   R +           YV  FRN P +V 
Sbjct: 9   YLMWLWQGFLLTLGLSFAAAVAATLAGFALAIARHAKRAWPRRAAAAYVVAFRNTPLVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V S+LP P  + 
Sbjct: 69  LLFWYFGVASLLPEPVMAW 87


>gi|126179312|ref|YP_001047277.1| polar amino acid ABC transporter, inner membrane subunit
           [Methanoculleus marisnigri JR1]
 gi|125862106|gb|ABN57295.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Methanoculleus marisnigri JR1]
          Length = 225

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 11/190 (5%)

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
             L + +  +  +    +Y+  F   GLP LVL+ L +   F    LG  +         
Sbjct: 39  MALGQVYGSRPVRWAVGVYVWFF--RGLPILVLLFLFWFGIFPGLGLGNLS--------- 87

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F+   + L    AA+ ++I R  + +V  GQM AA +LG++   A R V+LPQAMR  +
Sbjct: 88  AFVVGAVVLGLRGAAYQSQIFRGAIQSVGEGQMIAARSLGMSRLTAIRSVILPQAMRIAL 147

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  +++Y N+L +S++  A+G  +L+++   ++ QT   + + L    I++ L+      
Sbjct: 148 PGWSNEYPNILTDSAVCYAIGVVELLTITSRMVTQTNITMPVYLATAGIFIILNYGGLKL 207

Query: 385 MNRLNAKIAL 394
           ++RL A+IA+
Sbjct: 208 LHRLEARIAI 217



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 35/69 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G  +T  L  + ++   ++G  +  G++  ++ V W   VYV  FR +P LV+
Sbjct: 10  WFPYLLSGVASTLGLVLAALVLGLLLGLPMALGQVYGSRPVRWAVGVYVWFFRGLPILVL 69

Query: 145 IFFLYKSVL 153
           +F  +  + 
Sbjct: 70  LFLFWFGIF 78


>gi|288905751|ref|YP_003430973.1| amino acid ABC transporter, integral membrane protein
           [Streptococcus gallolyticus UCN34]
 gi|325978784|ref|YP_004288500.1| putative amino acid ABC transporter integral membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
 gi|288732477|emb|CBI14049.1| Putative amino acid ABC transporter, integral membrane protein
           [Streptococcus gallolyticus UCN34]
 gi|325178712|emb|CBZ48756.1| putative amino acid ABC transporter integral membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 215

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 27/222 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S ++G VL++      R+      + +  +YI         
Sbjct: 11  FILQGLWLTIYISFISIVLSTLIGTVLAVM-----RNGKNPILRWISSIYIEFVR----- 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                        + P L     I          +   A + +T+A +AEI+R GL  V 
Sbjct: 61  -------------NVPNLLWIFIIFLVFQMKSTPAGITAFTVFTSAALAEIIRGGLNGVD 107

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA +A G+T+ +    ++ PQA R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 108 DGQTEAGLAQGMTNFQIFIYIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQELFGK 167

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++ +     Q   +  +   IY  ++  I+    RL  K
Sbjct: 168 SQILMGRYFEADQVFTLYALIAAIYFVINFTISTISRRLAKK 209



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 40/71 (56%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  + IL G   T +++F  ++ +T+IGT++   R   N ++ WI  +Y+E  RN+P 
Sbjct: 5   TPTNISFILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPILRWISSIYIEFVRNVPN 64

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 65  LLWIFIIFLVF 75


>gi|257488010|ref|ZP_05642051.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|330985959|gb|EGH84062.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331008684|gb|EGH88740.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 262

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 11/211 (5%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           N  I + +  LG +  L    L      +  +    L++  F          + L Y   
Sbjct: 58  NILISLVAIALGSIFGLLVGALG-LSPFRLLRLPARLWVQVFRNAP-----WLVLIYFTT 111

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P   +    G     P+++ + + L+   +A +AEI R  + ++P  Q EAA +L  
Sbjct: 112 YVFPF--EIKVAGTYIAFPDWVKVTLGLALPASANVAEIFRGAVASIPATQWEAARSLAF 169

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQ 362
           T  +  R ++LPQ ++ ++PP  + Y  +   ++LA  VG  D++         +NQT  
Sbjct: 170 TRGQIFRSIILPQCLKRMLPPWMNLYAVITMGTALASLVGVHDVIDTAQIASNTVNQTSF 229

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + I    + ++ +    I+   + L  + A
Sbjct: 230 TVIIYCSLLALFFAYCYPISRLTHYLERRYA 260



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 45/91 (49%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +++   ++ A+  GF     ++   +   +I G LVGA  LS  +L+    R++V+VFRN
Sbjct: 41  FSALLQWSPALAAGFAQNILISLVAIALGSIFGLLVGALGLSPFRLLRLPARLWVQVFRN 100

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            P LV+I+F        + +    I  P  +
Sbjct: 101 APWLVLIYFTTYVFPFEIKVAGTYIAFPDWV 131


>gi|293375605|ref|ZP_06621879.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292645822|gb|EFF63858.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 225

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 100/235 (42%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  +    +        +    +I + S ++ +VL L      R    K  + +  
Sbjct: 1   MEEWGISVLFEGKNFIRLLQGLGVTLEISLISVMISVVLGLVMGMFMRV-KTKVVRLICR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY++T  I  +P LVL+ L Y   F        N  G        ++  +  S +  A +
Sbjct: 60  LYLNTVRI--VPQLVLLFLAY---FGLSKSFGINLSGE-------VASILVFSFWGIAEM 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++VR  L ++P+ Q E A+A+GL  R+  + +++PQ +R ++P   +    ++K +SL 
Sbjct: 108 GDLVRGALDSIPKHQYETALAIGLNQRQIYQYIIIPQTIRRLLPQTINLVTRIIKTTSLI 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           V +G  ++V VG  II  +   +      I  +   +Y  +   I+L   +L   
Sbjct: 168 VLIGVVEVVKVGQQIIEASRLTVPTAALWIYGVIFLLYFLICYPISLAATKLEKH 222


>gi|13474097|ref|NP_105665.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
 gi|14024849|dbj|BAB51451.1| amino acid ABC transporter, permease protein [Mesorhizobium loti
           MAFF303099]
          Length = 218

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 14/201 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   +   + + G +LS+      R+       A+        ++   P LV +   +  
Sbjct: 19  TTILLIAVTTLAGTLLSILGAAGRRNGPVLLRHAIA---WYVEVMRNTPFLVQLFFIF-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F            ++  +A++   AA+  EIV +GL AVP GQ EAA+ALG
Sbjct: 74  ---------FGLPSLGIRLDPILAAMLAMTLNMAAYTIEIVGAGLDAVPGGQTEAALALG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L  R+    ++LPQA++ I P LTSQ + ++  S++   +   +L      +  +T ++ 
Sbjct: 125 LRPRQVFIKIVLPQALKIIYPALTSQIVIMMLESAVVSQIAVRELTYEADMLQARTFRSF 184

Query: 365 EIILIWMFIYLSLSIMIALFM 385
           E   +   +YL++S+ +   +
Sbjct: 185 ETYFVVTLVYLAMSMALRRLL 205



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 40/96 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L     +  T++  L  AGR +   L+      YVEV RN P LV +FF++  
Sbjct: 16  GAATTILLIAVTTLAGTLLSILGAAGRRNGPVLLRHAIAWYVEVMRNTPFLVQLFFIFFG 75

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + S+    D  +     M LN    +   +    +A
Sbjct: 76  LPSLGIRLDPILAAMLAMTLNMAAYTIEIVGAGLDA 111


>gi|251788879|ref|YP_003003600.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537500|gb|ACT06121.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 240

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 1/175 (0%)

Query: 225 STFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            + +  G+P L++I L Y         +G++    G    P F+   +A+   +A++  E
Sbjct: 59  YSIVFRGIPELLIIYLFYFGGSGVLTQVGRWFGADGFIELPPFLIGALAIGLISASYQGE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R+  +AV  G++EAA A+G+   +    +LLPQ MR  +P L++ +   LK+S+L   
Sbjct: 119 VYRAARLAVNHGELEAARAMGMPRWRIGVRILLPQVMRFALPGLSNVWQMSLKDSALVSV 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            G  +L+         T       L    +YL L++       RL   ++    +
Sbjct: 179 TGIIELMRASQMAAGSTRDYFLFYLAGAALYLVLTVFSNTAFARLERILSRPYHR 233


>gi|313673709|ref|YP_004051820.1| polar amino acid abc transporter, inner membrane subunit
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940465|gb|ADR19657.1| polar amino acid ABC transporter, inner membrane subunit
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 259

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 96/209 (45%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +++ + + G++ ++  + +S       G  +    +S F        + I          
Sbjct: 51  LYLGTLIKGLMATIEISFISIFLGIGIGIVVAFGSLSPFYSIKTICKIYILTIRNTPLMT 110

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
            +L  +  +G       F      LS +  ++I+EIVR  ++++ + Q  +  ALG++  
Sbjct: 111 QILINYFVVGNIFHINGFWVAVFTLSLFEGSYISEIVRGSILSIDKQQWLSGYALGMSRI 170

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +  + V+LPQ+   IIP L++  ++ +K+SSL   +   +L       +++T    EI  
Sbjct: 171 QVLKKVILPQSYPIIIPSLSNILVSTVKDSSLLSIISIYELTFEAQKAVSETFMTFEIWF 230

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +  F+YLS++I+I + +  L  K     +
Sbjct: 231 MVAFLYLSINIIITILLKLLEKKFMRWRR 259



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 34/78 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G + T  ++F  +     IG +V  G LS    +  IC++Y+   RN P +  
Sbjct: 52  YLGTLIKGLMATIEISFISIFLGIGIGIVVAFGSLSPFYSIKTICKIYILTIRNTPLMTQ 111

Query: 145 IFFLYKSVLSVLPIPDHS 162
           I   Y  V ++  I    
Sbjct: 112 ILINYFVVGNIFHINGFW 129


>gi|149010775|ref|ZP_01832146.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147765256|gb|EDK72185.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP19-BS75]
          Length = 219

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|115359033|ref|YP_776171.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115284321|gb|ABI89837.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 231

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 14/229 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + L  +        +    ++ V S  L   L++    ++R    +       L++
Sbjct: 1   MNDFLSLIVQSGPDVARGIWITLELLVLSCTLAFALAVPL-AVARTSACRWLSTPTRLFM 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAF 280
           S F   G P LV I + Y        L QF+ +  S +       F     AL+   AA+
Sbjct: 60  SVF--RGTPLLVQIFVLYY------GLAQFSIVRASPLWLLVGGSFSCALCALTLNLAAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE +R G+  VP G+ EAA+A G++    T  V++P+A+  + P L ++ +  LK+++L
Sbjct: 112 MAEDIRGGIAGVPAGEKEAALAFGMSRFMLTWFVIVPRAIGIVAPTLGNEIVLQLKSTAL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           A  +   DL  V   I  +T    + +++   +Y+ ++ +++  + R+ 
Sbjct: 172 ASTITVLDLTGVARRISIETY-TTDALMLAGIVYVGITAVLSTVLKRVE 219



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L       A  +   +   R SA + ++   R+++ VFR  P LV IF LY  
Sbjct: 18  GIWITLELLVLSCTLAFALAVPLAVARTSACRWLSTPTRLFMSVFRGTPLLVQIFVLYYG 77

Query: 152 VLSVLPIPDHSIVLPFG 168
           +     +    + L  G
Sbjct: 78  LAQFSIVRASPLWLLVG 94


>gi|327188019|gb|EGE55249.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CNPAF512]
          Length = 260

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 14/226 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L +       N  I + +  LG V+      L      +     P+ Y     +     
Sbjct: 45  WLPYLASGFLMNVVISLSAMTLGTVVGTIFGIL------QLVPYRPVRYPVVAYVQAFRN 98

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
              + L +   +  P   +    G     P+++   I L+   +A++AEI R  ++++P 
Sbjct: 99  APHLVLIFATTYIFPF--EIVVFGNYLPFPDWLKAVIGLAIPASAYVAEITRGAILSIPT 156

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q EAA  LG +  +A R ++LPQ +R  +PP  +   ++   +SLA  VG  +L+    
Sbjct: 157 TQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILASITMGTSLASLVGVHELLHAAT 216

Query: 355 TIINQTGQ---AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                  +    I   ++ M  + +L   IA    RL        +
Sbjct: 217 DASTAVRRLDFTIIAYIVVMAAFFTLCYPIA---RRLEQHFNAGSR 259



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 74/218 (33%), Gaps = 14/218 (6%)

Query: 64  LSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK 123
           L   A F + + +V +         +  GF+    ++ S M   T++GT+ G  +L   +
Sbjct: 30  LWSLADFTLGRELVEWLP------YLASGFLMNVVISLSAMTLGTVVGTIFGILQLVPYR 83

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
            V +    YV+ FRN P LV+IF                 ++ FG +L         + +
Sbjct: 84  PVRYPVVAYVQAFRNAPHLVLIFATTYIFP--------FEIVVFGNYLPFPDWLKAVIGL 135

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  +V     G +LS+  T+          ++  L +I             + +   
Sbjct: 136 AIPASAYVAEITRGAILSIPTTQWEAAKGLGFSRSQALRWIILPQCLRRSLPPWMNILAS 195

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +     +            + +  +    L     A+I
Sbjct: 196 ITMGTSLASLVGVHELLHAATDASTAVRRLDFTIIAYI 233


>gi|270292047|ref|ZP_06198262.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
 gi|270279575|gb|EFA25417.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M143]
          Length = 230

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 88/176 (50%), Gaps = 2/176 (1%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           IS   IF L     I L + + +  P   ++          + + + + +    +A +AE
Sbjct: 55  ISKGYIFTLRCTPPIVLLFLVFYGLPEFLKWWLGLDINNWSKTIFVLLTMILLFSAIVAE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + ++   A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++++LA  
Sbjct: 115 VFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRDAALAYT 174

Query: 344 VGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GF D++  G  +I++     ++E       +Y  ++++I+     L   +  K +
Sbjct: 175 IGFVDVMGAGNLLISRNLGNYSLETYTAVALLYWGIALVISSLSRLLEKSLETKGR 230


>gi|170734678|ref|YP_001773792.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820716|gb|ACA95297.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 255

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             S +LG+ L+L A       R S        +  PLL     L +G   +V        
Sbjct: 32  AASVLLGVPLALAAGARHTPLRWSARGWLMLIRGTPLLVQLYLLYYGFGQIV-------- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P     +      +   F    +ALS   +A++A I+R  +  VP G++EA  A G
Sbjct: 84  ----PREWMRDSWASPLLRDAFWYAIVALSVNESAYVATILRGAIAGVPAGEIEAGHAYG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++ P+A R  +P LT + + LLK++ LA  V   D++    T+  +T +  
Sbjct: 140 MTRMQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVMGTANTLRFETLRVY 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E +     +Y+ L  ++ +   RL  +I   
Sbjct: 200 EPLAGAAIVYVVLVALLTIPAARLEQRINRY 230


>gi|241113592|ref|YP_002973427.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861800|gb|ACS59466.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 220

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 18/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +    +G+V++   T  SR        A+    +   +I  LP LVL+   +    
Sbjct: 29  VISILIGAAIGLVVAFALTSKSRF-------AVVPARVYVTVIRNLPILVLVLFVF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          +  S  + LS Y+ A++AE+ R+GL+++PRG  EA +A+GLT
Sbjct: 78  -------FALPQMGLRLDKIKSFVLVLSLYSGAYLAEVFRAGLLSIPRGLTEAGLAIGLT 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ P  +R+++P L+S  ++L K++SLA A+   +L      I  ++ + IE 
Sbjct: 131 GMQIRSSIIAPLMLRNVLPSLSSTIISLFKDTSLAAAIAVPELTFAARKINVESFRVIET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++   +Y++   +IA  M  +   +AL  
Sbjct: 191 WMVTSALYVAACFLIAAVMRVVERSLALPR 220


>gi|107023049|ref|YP_621376.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686710|ref|YP_839957.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|170735479|ref|YP_001774593.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|105893238|gb|ABF76403.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652425|gb|ABK13064.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
 gi|169821517|gb|ACA96098.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 228

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 95/212 (44%), Gaps = 11/212 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   + VLG+ + +              +  PL+      I   P +V +   +   F
Sbjct: 25  LALTAVATVLGVAVGVLGAAAYSADARAAVRLRPLIGAYVEAIRNTPFVVQLFFIF---F 81

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L             E+ +  +A++    A+  EIVR+G+ AVP+G +EAA AL ++
Sbjct: 82  GLPAL--------GVHIDEYTAAILAMTLNLGAYSVEIVRAGVAAVPKGHLEAASALAMS 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQA+  + P L+SQ +  +  S++   +  ADL      I ++  +A E 
Sbjct: 134 RAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYAASYIQSRNFRAFET 193

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +    YL++++++   +  +  ++  +  +
Sbjct: 194 YFVITLAYLAMALLLRATLGAMGRRLFTRRVR 225


>gi|329906186|ref|ZP_08274377.1| Glutamate Aspartate transport system permease protein gltJ
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327547319|gb|EGF32155.1| Glutamate Aspartate transport system permease protein gltJ
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 247

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 112/241 (46%), Gaps = 9/241 (3%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA-KIFVFSFVLGIVLSLFATRLSRHFHE 213
                      P G+      L    +     A   +V +  +G ++        R    
Sbjct: 4   NWNWQIFWAPSPDGVGTYMDTLVSGLVWTLATALTAWVMALFIGAIVGTI-----RTMPN 58

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +    L   Y+  F    +P LV + L Y +  +       N++     +P F++  I L
Sbjct: 59  RWAVRLANGYVELF--RNIPLLVQMFLWYFVMPELVPASMGNWLKAMPNAP-FITAVICL 115

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
             +T++ +A  V +G+ A+PRGQ  A  ALGLT  +  R VLLP A R ++PPLTS++LN
Sbjct: 116 GFFTSSRVAVQVSAGIQALPRGQTLAGTALGLTLPQTYRHVLLPMAFRIVLPPLTSEFLN 175

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++KNSS+A+ +G  +L +   ++   + Q  E       IY+ ++I++   M  L  K+A
Sbjct: 176 IIKNSSVALTIGLMELTARARSMSEFSFQVFEAFTAVTIIYIVVNIIVVNLMGLLEKKVA 235

Query: 394 L 394
           +
Sbjct: 236 V 236



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 38/74 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   ++ G V T   A +  + A  IG +VG  R   N+    +   YVE+FRNIP LV
Sbjct: 20  TYMDTLVSGLVWTLATALTAWVMALFIGAIVGTIRTMPNRWAVRLANGYVELFRNIPLLV 79

Query: 144 VIFFLYKSVLSVLP 157
            +F  Y  +  ++P
Sbjct: 80  QMFLWYFVMPELVP 93


>gi|149189500|ref|ZP_01867784.1| amino acid ABC transporter, permease [Vibrio shilonii AK1]
 gi|148836657|gb|EDL53610.1| amino acid ABC transporter, permease [Vibrio shilonii AK1]
          Length = 215

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 88/223 (39%), Gaps = 14/223 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
             R L          A I V S +    + L     +     K        YI+ F    
Sbjct: 1   MYRYLDSFIEGFAITASISVASIIGSFCIGLLVM-FACISQSKVLSKTGYTYINVFRNIP 59

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
                 I   + + +  P L  F           + +  +ALS    A+ A+++R+ +  
Sbjct: 60  F-----IVQVFFIFYGLPELRIF--------IDPYTTGVLALSIAVGAYCADVLRAAVQQ 106

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V R  +EAA + GL      R ++LP A+R+ I PL S ++NL+  +S+   V   +L  
Sbjct: 107 VDRDVIEAAQSFGLKRLTIYRKIILPIALRNSIKPLGSIFVNLILTTSILSTVTLNELTG 166

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               I  +T +  E+    +  Y  L+ ++++ +   + ++  
Sbjct: 167 TAKIIAAETFRPFEVYFFLLLFYCVLTYILSILITLAHKRLNR 209



 Score = 44.9 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 41/77 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y  + + GF  T  ++ + +I +  IG LV    +S +K+++     Y+ VFRNIP +V
Sbjct: 3   RYLDSFIEGFAITASISVASIIGSFCIGLLVMFACISQSKVLSKTGYTYINVFRNIPFIV 62

Query: 144 VIFFLYKSVLSVLPIPD 160
            +FF++  +  +    D
Sbjct: 63  QVFFIFYGLPELRIFID 79


>gi|315605386|ref|ZP_07880429.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312955|gb|EFU61029.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 219

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 12/226 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFLI 229
           +N   L+         A + +    +GIV SL    L +     +   A  +      L 
Sbjct: 1   MNLDILARYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIRQYRIPLAAQIGAAYVELS 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P LV +   Y           F                + L     A++AE +RSGL
Sbjct: 61  RNTPLLVQLFFIY-----------FGLPRVGIKWSGETCAIVGLIFLGGAYMAEALRSGL 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++   Q E+A ALGLT  +  R V LPQA+ + +PPL +  + L+K +S+   V   DL
Sbjct: 110 DSIATIQWESASALGLTPAQTLRHVALPQAIATSVPPLAANVIFLIKETSVVSVVALPDL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           V V   +I  +    E + + +  YL + + +++    +   +   
Sbjct: 170 VYVAKDLIGMSYNTSEALALLIIAYLVILLPVSIAARLIEKAVRRG 215



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 42/108 (38%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA   +   + T  +A  G++ +  +G LV A R     L A I   YVE+ RN P LV
Sbjct: 8   RYAPLYVDAAILTLRIAAIGIVGSLAVGLLVAAIRQYRIPLAAQIGAAYVELSRNTPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
            +FF+Y  +  V            G+           L    ++   +
Sbjct: 68  QLFFIYFGLPRVGIKWSGETCAIVGLIFLGGAYMAEALRSGLDSIATI 115


>gi|197294378|ref|YP_001798919.1| ABC-type arginine transport system,permease component [Candidatus
           Phytoplasma australiense]
 gi|171853705|emb|CAM11602.1| ABC-type arginine transport system,permease component [Candidatus
           Phytoplasma australiense]
          Length = 354

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 7/223 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR---LSRHFHEKTGKALPLLY--ISTF 227
              L        T+  I + S +LG +L+L   +   L +H+ +   K L  +Y   S F
Sbjct: 128 WSTLPTYKKGFITSFIISIDSVILGFLLALIFVKTKTLIKHYQKTNQKNLMRVYRTFSFF 187

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +   +  L  I L  Q      +   F  +  +T++  F +    L   TAA + +I+  
Sbjct: 188 INKTISFLNAIPLTIQALLVFNLFNLFQILRNNTMN--FYAALFVLVLNTAANLVKIMMH 245

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            +  + +GQ+EA  ALG++H++    ++  Q ++   P +  Q++N +KN+SL   +G +
Sbjct: 246 NIKILSQGQIEAGYALGMSHKQVFHYIIFEQGIKRSYPSVGQQFINNIKNTSLFQIIGLS 305

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L+                 +I   IYL +  +    ++++  
Sbjct: 306 SLLLQAQRNTTLDFDLWTPYIIVCAIYLIIVFITNFILDKIKK 348


>gi|86360504|ref|YP_472392.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284606|gb|ABC93665.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 230

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 15/214 (7%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             IFV S ++G + ++   R          + L + Y   F   G+P +V+I L Y   +
Sbjct: 26  LAIFVLSTIIGSLFAMVEYR-----RVPVLRQLVVAYKVAF--KGVPMVVVIFLAY---Y 75

Query: 247 DKPVLGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
             P   QF             +P +++L +AL+   AAF AE+V+  L +   GQ +AA 
Sbjct: 76  GLPSALQFLTSLVGVEYNGHSTPNWVTLIVALTACVAAFQAEVVKGALNSFDTGQADAAY 135

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           +LG   R+  R V+LPQ + + IP L + ++ ++K  SL  A+   D+ +          
Sbjct: 136 SLGYKKRQLFRRVMLPQVIVAAIPDLANSFMVIMKALSLGFAIEVVDIFAQSQLTAALNF 195

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
             +E  L+ + IY+ ++  +    +R    + ++
Sbjct: 196 YYLEAFLVAVVIYMVIAYAVTQIADRTERALRVR 229


>gi|315444882|ref|YP_004077761.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. Spyr1]
 gi|315263185|gb|ADT99926.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium sp. Spyr1]
          Length = 226

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 2/214 (0%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             T  ++ V S +  +VL      + R         +   Y++      L TL+++   +
Sbjct: 15  FWTTVQLTVLSAIGALVLGTVLAAM-RLAPVPMLNWIGTAYVNLVRNTPL-TLIILFCSF 72

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L     +               F    + L+ YTA+F+ E VR+G+  +P GQ EAA +
Sbjct: 73  GLAQTLGMTLADRQSPTFIADSGFRLAVLGLTVYTASFVCETVRAGVNTIPLGQAEAARS 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGLT  +  R+VLLPQA R+++ PL S  + L KN+++A A+G A+   +   +I  T  
Sbjct: 133 LGLTFGQNLRIVLLPQAFRAVVIPLGSVLIALTKNTTIASAIGVAEAALLMKEMIENTAA 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + +  I+   ++ L++ + L    L  ++A+  
Sbjct: 193 VLVVGGIFALGFVILTLPLGLVFGWLGKRLAVAR 226



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 34/74 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I   F  T  L     I A ++GT++ A RL+   ++ WI   YV + RN P  ++
Sbjct: 7   YREEIFAAFWTTVQLTVLSAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNLVRNTPLTLI 66

Query: 145 IFFLYKSVLSVLPI 158
           I F    +   L +
Sbjct: 67  ILFCSFGLAQTLGM 80


>gi|307706134|ref|ZP_07642953.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
 gi|307618534|gb|EFN97682.1| binding-protein-dependent transport system inner membrane component
           family protein [Streptococcus mitis SK321]
          Length = 219

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V + ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLATLIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ AT+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLATLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|228476994|ref|ZP_04061632.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|228251013|gb|EEK10184.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
          Length = 226

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+V+S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 22  HIAVLGILGSFLLGLVVSVI-----RHYRVPILSQLSTAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V        + L     +++AE  RSGL AV + Q E  +++
Sbjct: 74  ----------FGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DVALGMLVVAYLLMLLPISLVFSWIERRLR 213



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     +++ +   Y+E+ 
Sbjct: 1   MDWSIVQQYLPFYQKAFFLTLHIAVLGILGSFLLGLVVSVIRHYRVPILSQLSTAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +         G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEA 111


>gi|209546709|ref|YP_002278627.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537953|gb|ACI57887.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 90/232 (38%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +                 I++   +   V+        ++      +AL  +  
Sbjct: 1   MTFDINVLIGQWPAIVSGAGVTIMIWILGTIAAAVIGFLMAVARQYGGVLIDRALGAV-- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ I L Y             F+G         +  I +S Y AA+ +EI
Sbjct: 59  -VAVLRGTPFLIQIFLVYYGG---------PFVGLEL--DPLPAGLIGISVYGAAYFSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG  AVP+G +EA   +GLT  +  R +LLP+    ++PP  +  + L+K +++   +
Sbjct: 107 FRSGFQAVPKGHIEAGECVGLTKGQIVRRILLPEMTMLVLPPSVNMVVILMKETAVLSII 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L +    I +Q    +E +      Y  L  +     N    K++   
Sbjct: 167 TVPELTATLSAIGSQQYAFVEALSALALFYWVLVEVTGWLGNLAETKLSRFR 218



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 33/102 (32%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             AI+ G   T  +   G I A +IG L+   R     L+       V V R  P L+ I
Sbjct: 12  WPAIVSGAGVTIMIWILGTIAAAVIGFLMAVARQYGGVLIDRALGAVVAVLRGTPFLIQI 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F +Y     V    D       G+ +               A
Sbjct: 72  FLVYYGGPFVGLELDPLPAGLIGISVYGAAYFSEIFRSGFQA 113


>gi|322386068|ref|ZP_08059707.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321269912|gb|EFX52833.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 189

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 26/207 (12%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
            +F  V+GI+++          H +  + L   Y+    I        + L + ++F   
Sbjct: 1   MIFGTVMGIIMT---------SHSRVVRFLTRFYLEFIRIMP-----QLVLLFIVYFGLA 46

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
                N  G         S  I  + +  A + ++VR  + ++P+ Q E+  ALGLT+ +
Sbjct: 47  RNFNINISGE-------TSAVIVFTLWGTAEMGDLVRGAITSLPKHQFESGQALGLTNFQ 99

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE---- 365
               +++PQ +R ++P   +    ++K +SL V +G  ++  VG  II+     I     
Sbjct: 100 LYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASF 159

Query: 366 -IILIWMFIYLSLSIMIALFMNRLNAK 391
            I    + +Y ++   I+     L   
Sbjct: 160 WIYGTILVLYFAVCFPISKLSTHLEKH 186


>gi|289642306|ref|ZP_06474454.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           symbiont of Datisca glomerata]
 gi|289507838|gb|EFD28789.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           symbiont of Datisca glomerata]
          Length = 216

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 20/214 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V + +LG+VL+ F     R       +A+  +Y+ T +     T+VL A  + L
Sbjct: 21  ICGLVAVAALLLGVVLAGF-----RVSPVPPLRAVGTVYV-TLVRNCPLTIVLFAFAFGL 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                F      L+ YTAAF+ E VRSG+ AV  GQ EAA ++G
Sbjct: 75  P------------EVGINGSYFAFGVTGLTVYTAAFVCEAVRSGIGAVETGQAEAARSIG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQA 363
           LT  ++ RLV+LPQA+R++IPPL +  + ++KNS++  A G   +L SV  T+    G+ 
Sbjct: 123 LTFGQSLRLVILPQAIRAVIPPLGNVGIAMVKNSAIVGAFGVGGELYSVASTLNGARGEP 182

Query: 364 -IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + +    +  YL + I   L +     ++ +  
Sbjct: 183 ALPVYAGVVIGYLVIVIPAGLLVLAAEKRLRVAR 216



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  +     + A ++G ++   R+S    +  +  VYV + RN P  +V+F     
Sbjct: 14  GLLGTLTICGLVAVAALLLGVVLAGFRVSPVPPLRAVGTVYVTLVRNCPLTIVLFAFAFG 73

Query: 152 VLSVLPIPDHSIVLPFGMFLN 172
           +  V     +      G+ + 
Sbjct: 74  LPEVGINGSYFAFGVTGLTVY 94


>gi|225860605|ref|YP_002742114.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|225727812|gb|ACO23663.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|327390342|gb|EGE88683.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 219

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISNLSHMLAKR 213



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|158321702|ref|YP_001514209.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158141901|gb|ABW20213.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 221

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 13/207 (6%)

Query: 190 FVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
             F  +L  +L      L  +F+ +  K L   YI   L    P L+ +   Y       
Sbjct: 25  LAFFGILASLLIGMICSLILYFNVRWLKTLVKAYIE--LSRNTPLLIQLYFLY------- 75

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
               F       V  E  S  I LS    +++AE  R GL AV + Q+E+ ++LGL+  +
Sbjct: 76  ----FGLTKVGIVLSENTSAIIGLSFLGGSYMAEAFRGGLEAVSKFQIESGLSLGLSKMQ 131

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R +++PQA+   +P + +  + LLK +S+  A+   DL++V   +I    Q  + +L+
Sbjct: 132 IVRHIMIPQAISFSVPAIGANCIFLLKETSIFGAISTLDLMNVTKDLIGMYYQTFDSLLM 191

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  YL + + ++ F+  L  K+   E
Sbjct: 192 LVVAYLIILLPLSFFLTWLERKVRYAE 218



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 1/139 (0%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           + T  LAF G++ + +IG +         + +  + + Y+E+ RN P L+ ++FLY  + 
Sbjct: 20  LLTLKLAFFGILASLLIGMICSLILYFNVRWLKTLVKAYIELSRNTPLLIQLYFLYFGLT 79

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
            V  +   +     G+                 A +  F    G+ L L   ++ RH   
Sbjct: 80  KVGIVLSENTSAIIGLSFLGGSYMAEAFRGGLEA-VSKFQIESGLSLGLSKMQIVRHIMI 138

Query: 214 KTGKALPLLYISTFLIFGL 232
               +  +  I    IF L
Sbjct: 139 PQAISFSVPAIGANCIFLL 157


>gi|323525256|ref|YP_004227409.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1001]
 gi|323382258|gb|ADX54349.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1001]
          Length = 225

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 10/218 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T+   A   +F    G VL++        F   T +AL +   +   +F    L
Sbjct: 17  LSGMLITLQITAVAILFGLAWGTVLAI--------FSLSTHRALRIFTQAYVSLFRSIPL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++ L + L    P L +  F   ST+    +S   A S   AAF  EI+R+G+ ++PRG
Sbjct: 69  VMLLLWFFL--IVPQLLKALFNLPSTIDLRLISALTAYSLLEAAFFCEIIRAGIASLPRG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q++A  ALG+T  +  R V+LPQA R+++P   +Q + + +++SL   +   D       
Sbjct: 127 QLQAGHALGMTSGQTLRYVILPQAFRAMVPLALTQCIVIFQDTSLVYVIALGDFFRRVTA 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I  + G  + ++++    Y +++ M+    N +  + A
Sbjct: 187 IGERDGNIVPMLIVAGVAYWAITTMLIAITNGVRMRFA 224



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 34/69 (49%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G + T  +    ++     GT++    LS ++ +    + YV +FR+IP ++++ 
Sbjct: 14  DVLLSGMLITLQITAVAILFGLAWGTVLAIFSLSTHRALRIFTQAYVSLFRSIPLVMLLL 73

Query: 147 FLYKSVLSV 155
           + +  V  +
Sbjct: 74  WFFLIVPQL 82


>gi|260582107|ref|ZP_05849901.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae NT127]
 gi|260094739|gb|EEW78633.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae NT127]
          Length = 227

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 3/174 (1%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +   L  G P LV   L Y            +      +S  +    +AL+  +AA+  +
Sbjct: 51  LYLTLFTGTPLLVQFFLIYAGP--GQFQWIIDSPLWYVLSNAWFCAALALALNSAAYSTQ 108

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +    + A+P+GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K ++LA  
Sbjct: 109 LFHGAVKAIPKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTALAST 167

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +   D++     +      AI I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 168 ITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLAFER 221


>gi|220925012|ref|YP_002500314.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
 gi|219949619|gb|ACL60011.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium nodulans ORS 2060]
          Length = 232

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 2/211 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + +  F++G V+   A   ++       +A   +Y +T L      LV+  L +  
Sbjct: 22  TTLALALCGFLVGAVIGALAAS-AKLSGLLPLRAAADVY-TTLLRGVPDLLVIYLLYFGG 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +       G    P F     AL   + A+ AE+ R   +A+ RGQ+EAA A+G
Sbjct: 80  SAALGSVAGLFGASGFVGLPPFAVGVAALGIISGAYQAEVFRGAYLALDRGQIEAARAVG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R V+ P   R+ +P L + +  LLK+S+L    G  +L+         T Q  
Sbjct: 140 MSPALLFRRVVTPLVARTALPGLGNVWQILLKDSALVSVTGLVELLRQAQVGAGSTRQPF 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              L    +YL+++ +     +R  A     
Sbjct: 200 TFYLAAAALYLAITTLSTWGFSRAEAHARRG 230



 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 32/68 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L+    T  LA  G +   +IG L  + +LS    +     VY  + R +P L+V
Sbjct: 12  WGPALLLAAGTTLALALCGFLVGAVIGALAASAKLSGLLPLRAAADVYTTLLRGVPDLLV 71

Query: 145 IFFLYKSV 152
           I+ LY   
Sbjct: 72  IYLLYFGG 79


>gi|301512791|ref|ZP_07238028.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB058]
          Length = 280

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLP 233
              + T    F+ +F+LG +L +  T  ++      + + +  + +PL+    F  F   
Sbjct: 56  FTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVF- 114

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
              L  L   L      +    +          +    AL  YTAA ++E VR+G+  V 
Sbjct: 115 ---LEFLPDSLSAGSGDVVAGGWWKNILNQQPAVIGVFALGLYTAARVSEHVRAGINTVS 171

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +  
Sbjct: 172 RGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 231

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 232 KTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKRMAV 272



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 3/117 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    ++   +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FR
Sbjct: 40  AYAEAPTWLQMLGSGVFTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFR 99

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           NIP +V +FF     L  LP    +     G  +                 +F    
Sbjct: 100 NIPLIVQLFFWAFVFLEFLPDSLSAGS---GDVVAGGWWKNILNQQPAVIGVFALGL 153


>gi|238928187|ref|ZP_04659947.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas flueggei ATCC 43531]
 gi|238884147|gb|EEQ47785.1| amino-acid ABC superfamily ATP binding cassette transporter
           permease protein [Selenomonas flueggei ATCC 43531]
          Length = 225

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 2/218 (0%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                    +   S VL    + F   + R    + G  +  LY+S      L   +L+ 
Sbjct: 9   WQGAGVTLSLTALSLVLAAPPA-FCFAVLRVRGHRVGGTIARLYVSFVRGTPLVLQILLL 67

Query: 240 LKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                     ++               F       +  T A + E+ RS L+A+P+GQ+E
Sbjct: 68  YSLLPSLLNLLVKAAGSSFNVFEAVDPFWYAVFIFTLNTVALLTEVFRSALLAIPKGQLE 127

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           A    GL+  +    V+LPQA+   +P + +  +NL+K +SLA  +   D+++VG    +
Sbjct: 128 AGAVCGLSEAETYLHVILPQALVVALPSIANITVNLIKGTSLAFLMTVKDIMAVGKVAAS 187

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                IE  L    +YL L  ++ L       ++    
Sbjct: 188 YGYNYIEAYLDVFIVYLILCTIVQLLFAAAERRVGAFR 225


>gi|237797983|ref|ZP_04586444.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020834|gb|EGI00891.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 221

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 98/226 (43%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + L           ++     +LG+ L +    + R +  +    +  +Y+  
Sbjct: 5   FDFTPVLQNLDVLLRGALFTLELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE- 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI   P LV +   +           F          E+ +  +A+     A+  EIVR
Sbjct: 63  -LIRNTPFLVQLFFIF-----------FGLPSLGVQITEWQAAVLAMVVNLGAYSTEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L      I ++  ++ E  ++   IYL+++++I   +  +  + 
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLIRQLLAWIGRRY 216



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQNLDVLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVVNLGAYSTEIVRAGIQAI 116


>gi|15902668|ref|NP_358218.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|116516616|ref|YP_816114.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|15458207|gb|AAK99428.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116077192|gb|ABJ54912.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
          Length = 226

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  +I 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRIR 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|167034161|ref|YP_001669392.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166860649|gb|ABY99056.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 226

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 + +  L++  F          + L Y   +  P   Q    G     P+++ + 
Sbjct: 47  SPLAPLRGVARLWVQVFRNAP-----WLVLIYFTSYVFPFEIQ--VAGTWLAFPDWLKVT 99

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I L+   +A +AEI R  + ++P  Q EAA +L  +  +  R ++LPQ +R ++PP  + 
Sbjct: 100 IGLALPASANVAEIFRGAVASIPATQWEAARSLAFSRVQIFRSIILPQCLRRMLPPWMNL 159

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
           Y  +   ++LA  VG  DL+          N++G  + +    + ++ +    IA    R
Sbjct: 160 YAVVTMGTALASLVGVHDLIDSAQIAANTVNRSGFTVLVYFSVLALFFAYCYPIARLTQR 219

Query: 388 LNAKIA 393
           L  + A
Sbjct: 220 LERRYA 225


>gi|319946730|ref|ZP_08020964.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus australis ATCC 700641]
 gi|319746778|gb|EFV99037.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus australis ATCC 700641]
          Length = 225

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +      S +LG +L +         H K  + L   Y+    I      
Sbjct: 19  LQGLGVTIGISIISVFLSMILGTLLGIVM-----TSHSKVIRLLTRFYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G S       S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGES-------SAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+  +  R +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLSKVQLYRYIIIPQVLRRLLPQAINLITRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y  +   I+    +L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFIVCFPISKLAGQLENH 222



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   +  + I+GTL+G    S +K++  + R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISIISVFLSMILGTLLGIVMTSHSKVIRLLTRFYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|145224551|ref|YP_001135229.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium gilvum PYR-GCK]
 gi|145217037|gb|ABP46441.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium gilvum PYR-GCK]
          Length = 226

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 2/214 (0%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
             T  ++ V S +  +VL      + R         +   Y++      L TL+++   +
Sbjct: 15  FWTTVQLTVLSAIGALVLGTVLAAM-RLAPVPMLNWIGTAYVNLVRNTPL-TLIILFCSF 72

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L     +               F    + L+ YTA+F+ E VR+G+  +P GQ EAA +
Sbjct: 73  GLAQTLGLTLADRQSPTFIADSGFRLAVLGLTVYTASFVCETVRAGVNTIPLGQAEAARS 132

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGLT  +  R+VLLPQA R+++ PL S  + L KN+++A A+G A+   +   +I  T  
Sbjct: 133 LGLTFGQNLRIVLLPQAFRAVVIPLGSVLIALTKNTTIASAIGVAEAALLMKEMIENTAA 192

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + +  I+   ++ L++ + L    L  ++A+  
Sbjct: 193 VLVVGGIFALGFVILTLPLGLVFGWLGKRLAVAR 226



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I   F  T  L     I A ++GT++ A RL+   ++ WI   YV + RN P  ++
Sbjct: 7   YREEIFAAFWTTVQLTVLSAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNLVRNTPLTLI 66

Query: 145 IFFLYKSVLSV 155
           I F    +   
Sbjct: 67  ILFCSFGLAQT 77


>gi|326382188|ref|ZP_08203880.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326198918|gb|EGD56100.1| ABC transporter permease protein [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 243

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 51/174 (29%), Positives = 86/174 (49%), Gaps = 8/174 (4%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
           ++P+ +I+  LI       L+   + L +  P+L       G  + P F    +AL    
Sbjct: 48  SMPVRFIARVLIEFFRGTSLVVQLFWLFYVLPLL-------GYQLDPVF-CGILALGLNY 99

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A+ AE+VR  L AVP  Q+EAA+AL  + R+    V+ PQA   +IP L +  ++LLK 
Sbjct: 100 GAYGAEVVRGALTAVPAAQVEAAVALNFSARQRLTRVVFPQAWAMMIPSLGNLLIHLLKG 159

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++ A  +   DL +    +   TG  +    + + IYL L+ ++ L +N   A+
Sbjct: 160 TAFASFITLQDLTAGIVDLQKTTGDTLFSFGVGLVIYLILAYLVTLLINLAEAR 213


>gi|302188038|ref|ZP_07264711.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas syringae pv. syringae 642]
          Length = 215

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 14/227 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           +   +      +  +  + + SF+LG +L++    + R     T +A+ +    T  +  
Sbjct: 3   SLIFIMALLKAVPWSLALTLSSFLLGALLAIPLC-MMRISKHATLRAIAI--SLTVFMRS 59

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +P +V +   +           F+F         F++  + L   TAA +AEI R  L+A
Sbjct: 60  IPPIVWLFFIF-----------FSFSEYVVQLNAFVAAMLGLGLITAANLAEIYRGALLA 108

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ EA+  LGL  R     V++PQ  R  +P  ++  + LLK++++A  +G  ++  
Sbjct: 109 IPHGQREASHVLGLGFRDRAMSVMVPQVFRYSLPACSTYAIGLLKDTAIASTIGVPEVAQ 168

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           V   +  QT + +EI  +   +YL +S  +A     ++A +  + ++
Sbjct: 169 VAYQLSQQTFKGLEIYALAGCLYLLVSFAMAWLSRTVDANLRARIER 215



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 35/85 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +  A+L     +  L  S  +   ++   +   R+S +  +  I        R+IPP+V 
Sbjct: 6   FIMALLKAVPWSLALTLSSFLLGALLAIPLCMMRISKHATLRAIAISLTVFMRSIPPIVW 65

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +FF++ S    +   +  +    G+
Sbjct: 66  LFFIFFSFSEYVVQLNAFVAAMLGL 90


>gi|298294125|ref|YP_003696064.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296930636|gb|ADH91445.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 258

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 9/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      +     I     VLG+ L+      +R    +    L  +++  F    L
Sbjct: 12  WESLPALLDGLKVTMIITAIPLVLGLALAFPIC-FARMSERRLPALLAEIFVVFFRGAPL 70

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L+ +             G    + GS     F    +AL+   AA++ E++R  L+AV
Sbjct: 71  LILLYLVYYGLGQIAALREGPLWILFGS----PFGCAIVALALNHAAYMTEVLRGSLMAV 126

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P G +EA+ ALG++ R     V +P A+R  +    ++ ++ +K +++   V   DL +V
Sbjct: 127 PGGIVEASEALGISRRNVFIWVRMPLAIRYGLKAYQNEVISFIKGTAIVSVVTITDLTAV 186

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMI----ALFMNRLNAKIA 393
             TI  QT      IL     Y +   +I     L+   LN   A
Sbjct: 187 ANTIFEQTYDPFTPILCAAAFYWAFVNLIRVGFTLWGRWLNRHNA 231



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 39/93 (41%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            +          A+L G   T  +    ++    +   +   R+S  +L A +  ++V  
Sbjct: 5   PIDPALAWESLPALLDGLKVTMIITAIPLVLGLALAFPICFARMSERRLPALLAEIFVVF 64

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           FR  P L++++ +Y  +  +  + +  + + FG
Sbjct: 65  FRGAPLLILLYLVYYGLGQIAALREGPLWILFG 97


>gi|209551037|ref|YP_002282954.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536793|gb|ACI56728.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 18/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+         + V+GI+        +R    +  +A  + ++   ++   P L
Sbjct: 18  LWGSLGTIWLALAGMALALVIGII-----GVAARTSKIRLVRAPVIGFVE--IVRNTPFL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I   Y   F  P++       G  ++P  ++  IAL     A+  EI+R G+ +V +G
Sbjct: 71  VQIFFIY---FALPLM-------GIRLNPT-VTAIIALGINGGAYAIEIIRGGVESVSKG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EA  ALGL      RL++L  A+R+I P LTSQ++ L   +S+  ++   +L S    
Sbjct: 120 QIEAGFALGLHKGDVFRLIVLKPALRAIYPSLTSQFVMLTLTTSVCTSIAAYELTSAAQR 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I + T ++ E+      IYL +S ++      ++   
Sbjct: 180 IESDTFRSFEVYFSVTTIYLVISTLMMGLFALISRHY 216



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 45/84 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T WLA +GM  A +IG +  A R S  +LV      +VE+ RN P LV IFF+
Sbjct: 17  LLWGSLGTIWLALAGMALALVIGIIGVAARTSKIRLVRAPVIGFVEIVRNTPFLVQIFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y ++  +    + ++     + +N
Sbjct: 77  YFALPLMGIRLNPTVTAIIALGIN 100


>gi|183598312|ref|ZP_02959805.1| hypothetical protein PROSTU_01702 [Providencia stuartii ATCC 25827]
 gi|188020486|gb|EDU58526.1| hypothetical protein PROSTU_01702 [Providencia stuartii ATCC 25827]
          Length = 222

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 92/223 (41%), Gaps = 10/223 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     ++         +F+L ++ +L           KT      + +   L  G P L
Sbjct: 9   LPGLPTSLSLTFSALFVAFILAVLFTLI-------LSLKTPIISQAVKVYITLFTGTPLL 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V   L Y        L  +  +     +P ++   IAL+  +AA+   +    + A+P G
Sbjct: 62  VQFFLIYNGPSQFKSLQNYPVLWEFISTP-WVCAMIALALNSAAYSTLLFHGAVKAIPSG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q ++  ALG++  +    ++LP A +  +   +++ + + K++SLA  +   D++     
Sbjct: 121 QWQSCQALGMSKAQTM-RIILPYAFKRSLSSYSNEVVLIFKSTSLASTITMMDIMGYSSQ 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  Q+   +   +    IYL ++ ++ + M  +       E++
Sbjct: 180 VFGQSWDVM-AFVAAGIIYLVVNAILTIIMRFIERHALAFEQR 221


>gi|165976776|ref|YP_001652369.1| arginine transporter permease subunit ArtM [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165876877|gb|ABY69925.1| arginine transport system permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 227

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 10/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + +FVL ++L+   +  S+           ++     L  G P LV   L Y  
Sbjct: 19  LTAVSLLIAFVLAVILTFLLSMESKLIK-------AIVNGYLMLFTGTPLLVQFFLIY-- 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H         +      +S  +    +AL+  +AA+  ++    + A+P+GQ E   ALG
Sbjct: 70  HGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQRETCAALG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       +L+P A+R  +P  +++ + + K +SLA  +   D++     +      AI
Sbjct: 130 LSRLDTL-KILIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEYDAI 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I  I   IYL  + ++ + + R+ AK+   E+
Sbjct: 189 TIYGIAGAIYLVSTGIMTILLRRVEAKVLAFER 221


>gi|283954478|ref|ZP_06371998.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 414]
 gi|283794095|gb|EFC32844.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 414]
          Length = 219

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + + F    +    KI + + ++ IV   F   +++++ +K  K L   YI  F   
Sbjct: 5   FNAQNIEFLMQGLFLTLKIALATCIISIVFGTFL-AITKNYGDKLSKFLAACYIDIFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                 L+       F  PV             P+     I  S YT++ +AEI+R GL 
Sbjct: 64  P-----LLLWMLAACFVLPVFFG--------QFPQAFWGTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L 
Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 170

Query: 351 SVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIA 393
               TI+ +     EI+    +   IY  +   +++ +     K A
Sbjct: 171 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTA 216



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 5/192 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +A +  I + + GT +   +   +KL  ++   Y+++FRN P L+ +   
Sbjct: 13  LMQGLFLTLKIALATCIISIVFGTFLAITKNYGDKLSKFLAACYIDIFRNTPLLLWMLAA 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVLGIVLSLF 203
              +         +     G  L    +    +    N+         +S   G   +LF
Sbjct: 73  CFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLF 132

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L + F +     L  +  +      L  L +  L Y        L  F  I      
Sbjct: 133 YIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILAKLTSFEEILAMIGV 192

Query: 264 PEFMSLYIALSC 275
              +   I  S 
Sbjct: 193 VAGIYFIICFSL 204


>gi|167719667|ref|ZP_02402903.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei DM98]
          Length = 223

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 59  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 111

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 112 HAGIRAAGDGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 171

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 172 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 208


>gi|257784251|ref|YP_003179468.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
 gi|257472758|gb|ACV50877.1| polar amino acid ABC transporter, inner membrane subunit [Atopobium
           parvulum DSM 20469]
          Length = 225

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 23/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  V S  LGI++ LF T  ++           LL +   ++  +P LVL+ + + 
Sbjct: 25  YIGLISVVLSIPLGILVGLFMTSNNKIVRT-------LLRVYLEIVRVMPQLVLLFVVF- 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F        NF G         +  +  + + AA + ++VR  L ++P  Q + A  L
Sbjct: 77  --FGTSEWFDVNFDGIE-------ASIVVFTFWGAAELGDLVRGALESIPASQYDGAFVL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+ ++    V+LPQA+R ++PP  +    ++K +SL   +G  +L+ VG  I +     
Sbjct: 128 GLSRQQTFFQVILPQALRRLLPPAINLITRMIKTTSLCNLIGVVELLRVGSQITDFYRFM 187

Query: 364 IE------IILIWMFIYLSLSIMIALFMNRLNA 390
                   I     F+Y +    ++    RL  
Sbjct: 188 FPTDGALWIYGAIFFLYFAACFPLSYLSRRLER 220



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T ++    ++ +  +G LVG    S NK+V  + RVY+E+ R +P LV++F +
Sbjct: 16  LFGGLATTVYIGLISVVLSIPLGILVGLFMTSNNKIVRTLLRVYLEIVRVMPQLVLLFVV 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +        +    I     +F   
Sbjct: 76  FFGTSEWFDVNFDGIEASIVVFTFW 100


>gi|171778288|ref|ZP_02919494.1| hypothetical protein STRINF_00336 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282988|gb|EDT48412.1| hypothetical protein STRINF_00336 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 230

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 94/177 (53%), Gaps = 5/177 (2%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L     F++   P +VLI L +   +  P   ++            + + +A++   AA 
Sbjct: 55  LARGYVFILRCTPPIVLIFLVF---YGLPRFLEWWLGIDVNGWSRSIFVILAMTLLFAAS 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I+E+ +S  +A+P+GQ+EA +++GL+  +    +LLPQA R  +P +TS  +NLLK+ +L
Sbjct: 112 ISEVFKSSYLALPKGQLEAGLSIGLSEPQTFVRILLPQAFRIALPNITSAVINLLKDIAL 171

Query: 341 AVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A  +G  DL+  G  II++     ++E       IY  L++++++  + +  ++  K
Sbjct: 172 AYTIGLVDLMGEGNLIISRNMGNYSLETYTAVAVIYWILALILSVVTHIVENQLETK 228


>gi|160894717|ref|ZP_02075492.1| hypothetical protein CLOL250_02268 [Clostridium sp. L2-50]
 gi|156863651|gb|EDO57082.1| hypothetical protein CLOL250_02268 [Clostridium sp. L2-50]
          Length = 228

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 97/215 (45%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + +F LG++++  +    +           L+    +++ G P ++ + + Y  
Sbjct: 25  LFFVTLLGAFPLGLLIAFGSMSKFKPLSY-------LMKFIVWIVRGTPLMIQMLIIYYF 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P L   N I G      F++  ++     A + +EI R G+  +P GQ EA + LG
Sbjct: 78  ----PGLVFHNPIWGGGEGGRFVAASVSFIVNYACYFSEIYRGGIQGIPVGQEEAGLVLG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--- 361
           +T R+    V L Q ++ I+P ++++ + L+K++SLA  +   +++  G   +  +    
Sbjct: 134 MTPRQIFFKVKLLQMIKKIVPAMSNEIITLVKDTSLARIIALQEIIWAGQAFMKGSQGIS 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            AI  +    F YL  + ++ + + +L  K+    
Sbjct: 194 GAIWPLFFCAFYYLIWNGVLTVLLGKLEKKLDFFR 228



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+  GF+ T  L F  ++ A  +G L+  G +S  K ++++ +  V + R  P ++ +  
Sbjct: 14  ALNTGFIQTLKLFFVTLLGAFPLGLLIAFGSMSKFKPLSYLMKFIVWIVRGTPLMIQMLI 73

Query: 148 LYKSVLSVLPIPDH 161
           +Y     V   P  
Sbjct: 74  IYYFPGLVFHNPIW 87


>gi|2961080|gb|AAC05644.1| unknown [Pseudomonas marginalis pv. alfalfae]
          Length = 154

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 57/97 (58%), Positives = 70/97 (72%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L  FNF+GG  + PE ++L +AL+ YTAAFIAEIVRSG+ +V  GQ EAA +LGL     
Sbjct: 2   LSGFNFVGGWVLIPELLALTLALTVYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPT 61

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            R V++PQA+R IIPPLTSQYLNL KNSSLA  +   
Sbjct: 62  LRKVIIPQALRVIIPPLTSQYLNLAKNSSLAAGIRLP 98


>gi|320324765|gb|EFW80839.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
          Length = 225

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 41  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 88  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPF 147

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  + 
Sbjct: 148 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLN 207

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 208 WLVKRYEQH 216



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  +     +   ++  ++   RLS  + + W   VYVEV R I  LV+
Sbjct: 14  IARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|330891107|gb|EGH23768.1| amino acid ABC transporter permease [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 262

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 11/211 (5%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           N  I + +  LG +  L    L      +  +    L++  F          + L Y   
Sbjct: 58  NILISLVAITLGSIFGLLVGALG-LSPFRLLRLPARLWVQVFRNAP-----WLVLIYFTT 111

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +  P   +    G     P+++ + + L+   +A +AEI R  + ++P  Q EAA +L  
Sbjct: 112 YVFPF--EIKVAGTYIAFPDWVKVTLGLALPASANVAEIFRGAVASIPATQWEAARSLAF 169

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI---INQTGQ 362
           T  +  R ++LPQ ++ ++PP  + Y  +   ++LA  VG  D++         +NQT  
Sbjct: 170 TRGQIFRSIILPQCLKRMLPPWMNLYAVITMGTALASLVGVHDVIDTAQIASNTVNQTSF 229

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            + I    + ++ +    I+   + L  + A
Sbjct: 230 TVIIYCSLLALFFAYCYPISRLTHYLERRYA 260



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 45/91 (49%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +++   ++ A+  GF     ++   +   +I G LVGA  LS  +L+    R++V+VFRN
Sbjct: 41  FSALLQWSPALAAGFAQNILISLVAITLGSIFGLLVGALGLSPFRLLRLPARLWVQVFRN 100

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            P LV+I+F        + +    I  P  +
Sbjct: 101 APWLVLIYFTTYVFPFEIKVAGTYIAFPDWV 131


>gi|225868657|ref|YP_002744605.1| amino acid ABC transporter permease protein [Streptococcus equi
           subsp. zooepidemicus]
 gi|225870390|ref|YP_002746337.1| amino acid ABC transporter permease protein [Streptococcus equi
           subsp. equi 4047]
 gi|225699794|emb|CAW93605.1| putative amino acid ABC transporter permease protein [Streptococcus
           equi subsp. equi 4047]
 gi|225701933|emb|CAW99456.1| putative amino acid ABC transporter permease protein [Streptococcus
           equi subsp. zooepidemicus]
          Length = 213

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 19/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     + V S  LG +L+            K  + L  LYI  +++ G P L
Sbjct: 12  LDGALITLQVFFIVIVLSIPLGALLAFLM-----RVDFKPLQWLLTLYI--WVMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  +A +   AA+ AEI R G+  +P G
Sbjct: 65  LQLIFFYYV-----------LPSVGVTFDRMPAAILAFTLNYAAYFAEIFRGGIETIPNG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L L+  +  R V+LPQ  + ++P + ++ +NL+K+SSL   +G  DL+    T
Sbjct: 114 QYEAAKVLKLSPVQTVRYVILPQVFKIVLPSVFNEVINLVKDSSLVYVLGVGDLLLASKT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             N+    +  + I   IYL L  ++ +   ++  + 
Sbjct: 174 AANRDA-TLAPMFIAGLIYLLLIGLVTILSKQVEKRF 209



 Score = 43.0 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  + F  ++ +  +G L+        K + W+  +Y+ V R  P L+ + F 
Sbjct: 11  LLDGALITLQVFFIVIVLSIPLGALLAFLMRVDFKPLQWLLTLYIWVMRGTPLLLQLIFF 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV    D          LN 
Sbjct: 71  YYVLPSVGVTFDRMPAAILAFTLNY 95


>gi|320546926|ref|ZP_08041228.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
 gi|320448444|gb|EFW89185.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus equinus ATCC 9812]
          Length = 230

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 7/207 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +   +L   L       S+   EK+  +    Y+  F++   P +VLI L +   + 
Sbjct: 24  LWVLVLTILFGSLLGLFLAWSQLSGEKSLSSFARGYV--FILRCTPPIVLIFLVF---YG 78

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P   ++            + + +A++    A I+E+ +S   A+P+GQ+EA +++GLT 
Sbjct: 79  LPRFIEWWLGIDVNGWSRAVFVILAMTLLFGASISEVFKSSYQALPKGQLEAGLSIGLTE 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIE 365
            +    +LLPQA R  +P + +  +NLLK+ +LA  +G  DL+  G  II++     ++E
Sbjct: 139 YQTFIRILLPQAFRIALPNIVTAIINLLKDIALAYTIGLVDLMGEGNLIISRNMGNYSLE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
                  +Y  L+  ++   +    ++
Sbjct: 199 TYTAVAIVYWVLAFFLSFIAHVTENEL 225


>gi|306825910|ref|ZP_07459249.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432271|gb|EFM35248.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 230

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 97/219 (44%), Gaps = 7/219 (3%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                     +F   L   L       +R   +K+  A+   YI T           I L
Sbjct: 17  WQALPMTLSILFFTTLLGSLFGGLLAWARVGEDKSFAAISKGYIFTLRCTPP-----IVL 71

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + + +  P   ++          + + + + +    AA +AE+ ++   A+P+GQ EA 
Sbjct: 72  LFLVFYGLPEFLKWWLGLDINNWSKTIFVLLTMILLFAAIVAEVFKAAYQAIPKGQTEAG 131

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +++GLT  +    ++ PQA +  +P +T+  LNL+++++LA  +GF D++  G  +I++ 
Sbjct: 132 LSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRDAALAYTIGFVDVMGAGNLLISRN 191

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               ++E       +Y  ++++I+     L   +  K +
Sbjct: 192 LGNYSLETYTAVALLYWGIALVISSLSRLLEKSLETKGR 230


>gi|170289917|ref|YP_001736733.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173997|gb|ACB07050.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 211

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 19/229 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L +  L     T++           LGI + +  +R         G    L    
Sbjct: 1   MFWYDLASSLLVGTMNTLELLLISAPLGAGLGIAIGILGSRK--------GFLSILARAF 52

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           + +  G P LV + + +           F             S  I+    ++A+I+E  
Sbjct: 53  SSIFRGFPLLVTLFIVF-----------FGLTDFGIYLSPTASAIISFILCSSAYISEYF 101

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++++  GQ  AA A+G+   +    +++PQA+R  +P ++++ + +++ SSLA AVG
Sbjct: 102 RGAILSIDEGQSLAAKAIGMNETQEFLHIIVPQAIRRALPSISNEIVYMVQYSSLAFAVG 161

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++ SV  +  +   + +EI  I   IYLS++ ++ L   +L  ++ +
Sbjct: 162 VQEVYSVAKSFNSLYFRPLEIFSILALIYLSMTALVTLAFRKLTERLRI 210


>gi|240850843|ref|YP_002972243.1| glutamate-aspartate ABC transporter permease component GltJ
           [Bartonella grahamii as4aup]
 gi|240267966|gb|ACS51554.1| glutamate-aspartate ABC transporter permease component GltJ
           [Bartonella grahamii as4aup]
          Length = 250

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 10/219 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+  +    + + + G+++    T           + +  +++   ++  +P L
Sbjct: 34  LDGLKNTVILSITSLILAVLCGVIIGTMRTLPKTSIINYIFRTIGAIWVE--IMRNIPLL 91

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P +        +      + +  AL  +T+A IAE VRSG+ A+P G
Sbjct: 92  VQVFLWY---FVVPKIY-----PPAMKFSPILLITCALGFFTSARIAEQVRSGIEAIPSG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA+A+G T  ++ R ++LP+A+R+I+PPLTS+ + ++KNSS+A AV   +L+     
Sbjct: 144 QRYAAMAMGFTTYQSYRYIILPRAIRTIMPPLTSEAMGIVKNSSIAFAVSINELMQFQYQ 203

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I +     E  L+   +Y+ +++ + + M  +   + +
Sbjct: 204 AIEEVSHVYENYLLVTILYILIALFVFIVMTVIEQILKI 242



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA-----NKLVAWICRVYVEVF 136
             +Y   +L G  NT  L+ + +I A + G ++G  R        N +   I  ++VE+ 
Sbjct: 26  SHTYLDTLLDGLKNTVILSITSLILAVLCGVIIGTMRTLPKTSIINYIFRTIGAIWVEIM 85

Query: 137 RNIPPLVVIFFLYKSVLSVLPIP 159
           RNIP LV +F  Y  V  + P  
Sbjct: 86  RNIPLLVQVFLWYFVVPKIYPPA 108


>gi|190895402|ref|YP_001985694.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
 gi|190699347|gb|ACE93431.1| octopine ABC transporter, permease protein [Rhizobium etli CIAT
           652]
          Length = 241

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +  +G VL       ++        +L  +Y + F       L++  + +  
Sbjct: 24  MTLAVTATALAIGAVLG-AIVAGAKLSGNPLLVSLGNVYTTVFR-GVPELLIIYLIYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G+     G    P F +  +A+   + ++ AE+ R   +A+ +G++EAA A+G
Sbjct: 82  SSAVTSIGKAMGYEGFLGLPSFAAGALAVGIISGSYQAEVFRGAYLAIAKGELEAASAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +++PQ +R  IP L + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MHRGMRFRRIIIPQVLRFAIPGLGNVWQLSLKDSALISVTGLAELMRTSQVAAGSTRQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +YL L+ +     N    +
Sbjct: 202 LFFIAGGCLYLILTSLSDRIFNGAERR 228



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 36/71 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +++  + T  +  + +    ++G +V   +LS N L+  +  VY  VFR +P L++
Sbjct: 14  WGALLILAALMTLAVTATALAIGAVLGAIVAGAKLSGNPLLVSLGNVYTTVFRGVPELLI 73

Query: 145 IFFLYKSVLSV 155
           I+ +Y    S 
Sbjct: 74  IYLIYFGGSSA 84


>gi|13474335|ref|NP_105903.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
 gi|14025088|dbj|BAB51689.1| ABC transporter, permease protein [Mesorhizobium loti MAFF303099]
          Length = 230

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 13/235 (5%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             +       GL      +   A      F++ + + L             G        
Sbjct: 3   WNWLPQYWEMGLMGIWRALWILAVTCALGFLIAVPVGLAQAA---------GSIWVAAPA 53

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAF 280
             F      T +L+ L    +    +  Q+ +I  S + P     +    +AL+   A +
Sbjct: 54  KVFCTIIRGTPLLLQLWLLYYGLGSLFPQYPWIRESWMWPYLRQAWPYGVLALTLSFAGY 113

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E++R     VP+GQ+EAA A G++  K  + +LLPQA    +P LT + +  LK++ L
Sbjct: 114 EGEVMRGAFAGVPQGQLEAARAFGMSRWKIFQRILLPQAFYRALPTLTGETVLQLKSTPL 173

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +   D+ +V G +   T    E +L+   IY++++ ++ L ++R+ A+I +K
Sbjct: 174 VATISVIDIFAVAGKVRQDTYLTYEPLLLLALIYMAITGILVLALSRIEARIPVK 228


>gi|148983987|ref|ZP_01817306.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|225856306|ref|YP_002737817.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|147924134|gb|EDK75246.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|225724961|gb|ACO20813.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|301799653|emb|CBW32213.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae OXC141]
          Length = 219

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|331002713|ref|ZP_08326228.1| hypothetical protein HMPREF0491_01090 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330407126|gb|EGG86630.1| hypothetical protein HMPREF0491_01090 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 223

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 88/210 (41%), Gaps = 22/210 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + S  LGI++ +        F     KA+  +Y+    I        + L + + F
Sbjct: 30  LIAVLISIPLGILVGILM-----TFKNPIIKAVFRIYLEFIRIMP-----QLVLLFIVFF 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               +   +  G        ++  I  S +  A + ++VR  +I++P+ Q E++ ALGL 
Sbjct: 80  GSTRVLGADISGD-------LAAVIVFSLWGIAEMGDLVRGAIISIPKHQYESSEALGLD 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----G 361
            R+    +++PQ ++ +IP   +    ++K +SL + +G  +++ V   II         
Sbjct: 133 KRQTFIYIIIPQTVKRLIPLSINLITRMIKTTSLVLMIGVVEVIKVAQQIIEANRTSSPN 192

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            A  + L    +Y      I++F   L  +
Sbjct: 193 AAFGVYLAVFIMYFIACTPISMFARYLEKR 222



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 33/67 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G      ++   ++ +  +G LVG      N ++  + R+Y+E  R +P LV++F +
Sbjct: 18  LLGGLGIALRISLIAVLISIPLGILVGILMTFKNPIIKAVFRIYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSV 155
           +     V
Sbjct: 78  FFGSTRV 84


>gi|197295419|ref|YP_002153960.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944898|emb|CAR57507.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 228

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 95/212 (44%), Gaps = 11/212 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   + VLG+ + +              +  PL+      I   P +V +   +   F
Sbjct: 25  LALTAVATVLGVAVGVLGAAAYSADARAAVRLRPLIGAYVEAIRNTPFVVQLFFIF---F 81

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L             E+ +  +A++    A+  EIVR+G+ AVP+G +EAA AL ++
Sbjct: 82  GLPAL--------GVHIDEYTAAILAMTLNLGAYSVEIVRAGVAAVPKGHLEAASALAMS 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQA+  + P L+SQ +  +  S++   +  ADL      I ++  +A E 
Sbjct: 134 RAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYAASYIQSRNFRAFET 193

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             +    YL++++++   +  +  ++  +  +
Sbjct: 194 YFVITLAYLAMALLLRATLGAMGRRLFTRRVR 225


>gi|190895057|ref|YP_001985350.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|190700718|gb|ACE94800.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|327194398|gb|EGE61258.1| putative amino acid ABC transporter permease [Rhizobium etli
           CNPAF512]
          Length = 222

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 90/232 (38%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +                 I++       V+        ++      KAL  +  
Sbjct: 1   MTFDINVIIEQWPAIVSGAGVTIMIWILGTTAAAVIGFLVAVARQYGGVLIDKALGGV-- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ I L Y             FIG         +  I +S Y AA+ +EI
Sbjct: 59  -VAVLRGTPFLIQIFLVYYGG---------PFIGLDL--DPVPAGLIGISIYGAAYFSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG  AVP+G +EA   +GLT R+    +LLP+    ++PP  +  + L+K +++   +
Sbjct: 107 FRSGFQAVPKGHIEAGECVGLTRRQIVWRILLPEMTMLVLPPSVNMVVILMKETAVLSII 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L +    I +Q    +E + +    Y  L  +     N    K++   
Sbjct: 167 TVPELTATLSAIGSQQYAFVEALSVLALFYWVLVELTGWLGNIAETKLSRLR 218



 Score = 36.1 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 32/102 (31%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             AI+ G   T  +   G   A +IG LV   R     L+       V V R  P L+ I
Sbjct: 12  WPAIVSGAGVTIMIWILGTTAAAVIGFLVAVARQYGGVLIDKALGGVVAVLRGTPFLIQI 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F +Y     +    D       G+ +               A
Sbjct: 72  FLVYYGGPFIGLDLDPVPAGLIGISIYGAAYFSEIFRSGFQA 113


>gi|311104486|ref|YP_003977339.1| arginine/ornithine transporter AotM [Achromobacter xylosoxidans A8]
 gi|310759175|gb|ADP14624.1| arginine/ornithine transport protein AotM [Achromobacter
           xylosoxidans A8]
          Length = 229

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 94/231 (40%), Gaps = 10/231 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M  + +        +   A       +  +V+ L           + G            
Sbjct: 1   MHFDFQVAWDSLPKLLAGAGTTFAVLLPVLVIGLLLALPVALASFRPGPRALFASSYIGF 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF----MSLYIALSCYTAAFIAEI 284
             G+P+LVL+ L Y        L QF+ +  + +   F    +  ++ L+   + F+AEI
Sbjct: 61  FRGVPSLVLLYLIYS------GLPQFSIVRDTFLWNVFSNAYVCAWLGLALTHSGFMAEI 114

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL A+P+G +EAA  LGL   +    + +P   R ++    ++ L ++K+++   A+
Sbjct: 115 IRGGLAAIPKGTIEAAQTLGLKPAQILFRLRIPLVARYVLRAYQNELLIMVKSTAAVSAI 174

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              DL +   T+ + T      ++    IY  ++  I L  +  + ++   
Sbjct: 175 TLVDLTAAANTVFDYTYDPFTPLITAAAIYWCITNSIRLGFSIADRRLNRY 225


>gi|294101062|ref|YP_003552920.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
 gi|293616042|gb|ADE56196.1| polar amino acid ABC transporter, inner membrane subunit
           [Aminobacterium colombiense DSM 12261]
          Length = 224

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 97/221 (43%), Gaps = 13/221 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           + L +         +I   +  LG+ + L               A+  +Y S  +   + 
Sbjct: 9   QSLPYLLQGTLVTLRIVALALALGLCMGLPL-------------AIGQVYGSASIQKMVK 55

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
             V I           +     F      +  F +  + L   +AA+ ++I R  ++++ 
Sbjct: 56  AYVWIFRGLPNLVLLFLFFFGIFPSLRIDASAFSTAVVVLGLRSAAYQSQIFRGSILSLG 115

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQM AA +LG+   +A   ++LPQA+R  +P  +++Y  LL +SS+  A+G  ++++  
Sbjct: 116 EGQMLAARSLGMNKLQAIIWIILPQALRIALPGWSNEYPILLTDSSVTYAIGVLEILTRA 175

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++++T + + I L    I++ L+      ++ +  K+ +
Sbjct: 176 NLVVSRTYKPMPIFLTCAIIFILLNYGGMRLLHMIENKMRI 216



 Score = 36.1 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            +L G + T  +    +     +G  +  G++  +  +  + + YV +FR +P
Sbjct: 13  YLLQGTLVTLRIVALALALGLCMGLPLAIGQVYGSASIQKMVKAYVWIFRGLP 65


>gi|290956974|ref|YP_003488156.1| glutamate uptake system protein [Streptomyces scabiei 87.22]
 gi|260646500|emb|CBG69597.1| glutamate uptake system [Streptomyces scabiei 87.22]
          Length = 225

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 5/227 (2%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           FL+N              K+ VFS +  ++       + R       +    +Y++    
Sbjct: 4   FLSNYNDPTFLGAFWMTVKLTVFSAIGSLIWGTVLAAM-RVSPVPLMRGFGTVYVNVVRN 62

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             L  +    + +       +       G    +  F    +    YTAAF+ E +RSG+
Sbjct: 63  IPLTVI----IVFSSLGLADIFRVTMGAGNDVKATAFRLAILGFVAYTAAFVCEALRSGI 118

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             VP GQ EAA A+GL   +   L++LPQA R++I PL +  + L KN+++A A+G  + 
Sbjct: 119 NTVPVGQAEAARAIGLNFTQVLGLIVLPQAFRAVIGPLANVLIALTKNTTVAAAIGVWEA 178

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +   +I +  Q + I  I+ F ++ L++   L +  L+ ++A+K 
Sbjct: 179 AYLMKGMIEKEAQTLLIGAIFAFGFVVLTLPTGLILGWLSKRLAVKR 225



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 29/59 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            L  F  T  L     I + I GT++ A R+S   L+     VYV V RNIP  V+I F
Sbjct: 13  FLGAFWMTVKLTVFSAIGSLIWGTVLAAMRVSPVPLMRGFGTVYVNVVRNIPLTVIIVF 71


>gi|149005716|ref|ZP_01829455.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|303260099|ref|ZP_07346072.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303261283|ref|ZP_07347231.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303263948|ref|ZP_07349869.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|303265939|ref|ZP_07351835.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|303268321|ref|ZP_07354118.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|307126806|ref|YP_003878837.1| glutamine ABC transporter membrane-spanning permease [Streptococcus
           pneumoniae 670-6B]
 gi|147762656|gb|EDK69616.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|302637417|gb|EFL67904.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638794|gb|EFL69256.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302642159|gb|EFL72509.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS458]
 gi|302644523|gb|EFL74774.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS457]
 gi|302646353|gb|EFL76579.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS397]
 gi|306483868|gb|ADM90737.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 670-6B]
 gi|332077037|gb|EGI87499.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 219

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISNLSHMLAKR 213



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|227509546|ref|ZP_03939595.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190908|gb|EEI70975.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 190

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 19/206 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   SF+  ++L LF T L++  H K        +IS   + G+P LVL+ + Y    
Sbjct: 3   LYLTAISFIGALILGLFLT-LAQMSHFKLLHWPARAFISF--MRGVPMLVLLFIIYFGFG 59

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IA +   +AF++E+ RS   AV RGQ EAA +LGL 
Sbjct: 60  AN----------------ALPAAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLP 103

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R     V+ PQA R  IP L +  L+L K++SLA  +  +++      I       + I
Sbjct: 104 YRTVIAKVIFPQAFRIAIPALGNILLDLFKSTSLAAMITVSEMFMDAKIIAGAYQDYMSI 163

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++   IY     ++ +   +L   +
Sbjct: 164 YIVMAIIYWFFCWLMTVGQTQLEHAL 189



 Score = 36.5 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           + +L     I A I+G  +   ++S  KL+ W  R ++   R +P LV++F +Y   
Sbjct: 2   SLYLTAISFIGALILGLFLTLAQMSHFKLLHWPARAFISFMRGVPMLVLLFIIYFGF 58


>gi|172062268|ref|YP_001809919.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171994785|gb|ACB65703.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 221

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLS--RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           A    F+    +V SL    LS  R    +  +     ++  F   G P L+ +   + +
Sbjct: 20  ALTLAFTVTCALVGSLLGFVLSLLRMSPSRWLRGPVTAFVEFF--RGTPLLIQL---FWV 74

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  PV+ +          P ++S+ I+L+ Y AA  +E  R  L ++   Q +A IAL 
Sbjct: 75  FFCFPVVLRLPI-------PPYLSVLISLTLYMAAITSETFRGSLKSIAGEQHDACIALS 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       V+ PQA+   IPPL S  ++L K S+L  +VG ADL+ VG  + N T + +
Sbjct: 128 LSPHVKIVYVIFPQALLRAIPPLLSNVVSLFKESALISSVGIADLMFVGQNVSNSTARPV 187

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E +     IY  ++  +   +  + +++  +
Sbjct: 188 EFLTTVAVIYFLVAFPLTRLVGVVESRMLRR 218



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 38/87 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y   +  G   T     +  +  +++G ++   R+S ++ +      +VE F
Sbjct: 3   LDFSVVWPYWLVLAKGLALTLAFTVTCALVGSLLGFVLSLLRMSPSRWLRGPVTAFVEFF 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           R  P L+ +F+++     VL +P    
Sbjct: 63  RGTPLLIQLFWVFFCFPVVLRLPIPPY 89


>gi|163857805|ref|YP_001632103.1| amino acid ABC transporter, permease protein [Bordetella petrii DSM
           12804]
 gi|163261533|emb|CAP43835.1| amino acid ABC transporter, permease protein [Bordetella petrii]
          Length = 229

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 16/233 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  + +    L     T+  +         LG ++ +  +   R  H+  G  + +
Sbjct: 3   HEYWSTAVTVMPFLLKGFLETLKISFVAIAAGSALGFLIGVLRSYRIRVVHQLLGLYIHM 62

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L        G P LV +   Y  +F  P  G       S       + +++LS YT++++
Sbjct: 63  L-------RGTPFLVQL---YVFYFVLPSSGVAWLEWDSD-----TAAFVSLSVYTSSYV 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIV + ++AVPRGQ+E A+ LGL   +A RLV+LPQAMR I+ P++  Y+ L+K++++ 
Sbjct: 108 AEIVMNAILAVPRGQVEGALTLGLRPLQALRLVILPQAMRLIVQPMSGVYVMLIKSTAIV 167

Query: 342 VAVGFADLVSVGGT-IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             VG  +L   G   +I    +++ I  +   IY      +    N +  ++A
Sbjct: 168 SVVGITELTRQGEVFMITYPSKSLFIYALIALIYFLYCYPLLRLANWVEKRVA 220



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 38/77 (49%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +++  +    +L GF+ T  ++F  +   + +G L+G  R    ++V  +  +Y+ + R 
Sbjct: 6   WSTAVTVMPFLLKGFLETLKISFVAIAAGSALGFLIGVLRSYRIRVVHQLLGLYIHMLRG 65

Query: 139 IPPLVVIFFLYKSVLSV 155
            P LV ++  Y  + S 
Sbjct: 66  TPFLVQLYVFYFVLPSS 82


>gi|329121396|ref|ZP_08250021.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Dialister micraerophilus DSM 19965]
 gi|327469686|gb|EGF15153.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Dialister micraerophilus DSM 19965]
          Length = 218

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 88/221 (39%), Gaps = 14/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L        T  +I  F  VL ++  LF   + R+        +   YI   L  
Sbjct: 5   YIFKYLHLFVDAGLTTLRIAFFGIVLSLLFGLFI-SVIRYKKVPIISQICKFYIE--LSR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P LV +   Y           F                  L    A+++AE  RSGL 
Sbjct: 62  NTPLLVQLFFLY-----------FGLPKAGIHISGENCALSGLVFLGASYMAETFRSGLE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V + Q+E+A ALG+   +  R V++PQA+   IP + +  + L+K +S+       DL+
Sbjct: 111 SVAKSQIESAAALGMGEYQIFRFVIIPQAVSVSIPSVCANIIFLIKETSVFSVCAIPDLM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            V   +I    +  E + + +  YL + + +++    L  K
Sbjct: 171 YVAKDLIGLYYKTDETLFMLVIAYLIILLPVSIIAYLLERK 211



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 36/76 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    +   + T  +AF G++ + + G  +   R     +++ IC+ Y+E+ RN P LV 
Sbjct: 9   YLHLFVDAGLTTLRIAFFGIVLSLLFGLFISVIRYKKVPIISQICKFYIELSRNTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           +FFLY  +        
Sbjct: 69  LFFLYFGLPKAGIHIS 84


>gi|306831849|ref|ZP_07465005.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426047|gb|EFM29163.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 215

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 27/222 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S ++G VL++      R+      + +  +YI         
Sbjct: 11  FILQGLWLTIYISFISIVLSTLIGTVLAVM-----RNGKNPIFRWISSIYIEFVR----- 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                        + P L     I          +   A + +T+A +AEI+R GL  V 
Sbjct: 61  -------------NVPNLLWIFIIFLVFQMKSTPAGITAFTVFTSAALAEIIRGGLNGVD 107

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA +A G+T+ +    ++ PQA R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 108 DGQTEAGLAQGMTNFQIFIYIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQELFGK 167

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++ +     Q   +  +   IY  ++  I+    RL  K
Sbjct: 168 SQILMGRYFEADQVFTLYALIAAIYFVINFTISTISRRLAKK 209



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 39/71 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  + IL G   T +++F  ++ +T+IGT++   R   N +  WI  +Y+E  RN+P 
Sbjct: 5   TPTNISFILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPIFRWISSIYIEFVRNVPN 64

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 65  LLWIFIIFLVF 75


>gi|254488499|ref|ZP_05101704.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           GAI101]
 gi|214045368|gb|EEB86006.1| amino acid ABC transporter, permease protein [Roseobacter sp.
           GAI101]
          Length = 431

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 19/228 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R +    L M         S  LGI+L+L      R       K + +++I       L 
Sbjct: 219 RNMGGFMLNMILGVICVSLSLPLGILLAL-----GRQSSLPIIKLICVVFIEFIRGVPLI 273

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           TL+ +A     +F  P           T     + + I ++ + +A+IAE++R GL A+P
Sbjct: 274 TLLFVANVVLAYFLPP----------GTNFDLILRVIIMITMFASAYIAEVIRGGLAALP 323

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL--VS 351
           RGQ E A +LGL + ++ RL++LPQA++  IP + +  + L K+++L   +   DL  + 
Sbjct: 324 RGQYEGAESLGLDYAQSMRLIILPQALKISIPGIVNVAVGLFKDTTLVSIISMFDLVGMI 383

Query: 352 VGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            G  + +    G   E+      ++  +   I+ +   L  ++    +
Sbjct: 384 RGPILASTDWNGVYWELWGFAAALFFVVCYGISQYSQWLERQLQTDHR 431


>gi|148994405|ref|ZP_01823628.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|149005819|ref|ZP_01829558.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|168488380|ref|ZP_02712579.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP195]
 gi|168492228|ref|ZP_02716371.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|307126897|ref|YP_003878928.1| glutamine ABC transporter membrane-spanning permease [Streptococcus
           pneumoniae 670-6B]
 gi|147762759|gb|EDK69719.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|147927241|gb|EDK78275.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|183573086|gb|EDT93614.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae SP195]
 gi|183573530|gb|EDT94058.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|306483959|gb|ADM90828.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 670-6B]
 gi|332074507|gb|EGI84983.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17570]
 gi|332077127|gb|EGI87589.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 226

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 18/208 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              + + +  YL + + I+L  + +  +
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERR 211



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|282864977|ref|ZP_06274031.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
 gi|282560402|gb|EFB65950.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces sp. ACTE]
          Length = 214

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 + +  LG V++ F     R     + +A+  ++++      L  L    L    
Sbjct: 21  LTVYASLLALALGFVMASF-----RVAPVSSLRAIGTVWVAVLRNTPLTLLFFAVLLGLP 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F   +  Q                 +AL CYT+AFI E +RSG+  VP GQ EAA +LG
Sbjct: 76  RFGLVLPFQLF-------------AVLALGCYTSAFICEALRSGINTVPTGQGEAARSLG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    V+LPQA RS+IPP+ S  + L KNS++A A    +L+    T+       I
Sbjct: 123 MSFSQTLSNVVLPQAFRSVIPPVGSTLIALAKNSAIAGAFSVTELLGTYKTLNELGYSII 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +     YL +++ I+   N +  +  +  
Sbjct: 183 WSFVWIAVGYLIITLAISALFNLMEKRWGVAR 214



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 29/64 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A  +G ++ + R++    +  I  V+V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASLLALALGFVMASFRVAPVSSLRAIGTVWVAVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|126659707|ref|ZP_01730836.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Cyanothece sp. CCY0110]
 gi|126619052|gb|EAZ89792.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Cyanothece sp. CCY0110]
          Length = 391

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 74/307 (24%), Positives = 128/307 (41%), Gaps = 23/307 (7%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV-----EVFRNIPPLVVIFF 147
             N+  L    ++   I+   V    +S+ KL+  +    V     +      P V  + 
Sbjct: 100 LFNSINLIILALVALIIVLLAVPISLISSVKLLGILFLFVVFLIIGQRISQKFPNVKSWL 159

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
               +LS   +      + F   +     S   LT+       + SF  G++L+L     
Sbjct: 160 SLIWILSFFLLLGLLQGILFLGNVRLDDFSGLILTVFVAIISIILSFPFGVLLAL----- 214

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R  +    + L + YI          L LI + +      P++     +         +
Sbjct: 215 GRQSNLPIIRWLSISYIELIR-----GLPLIGILFMAQVMLPLI-----LPQEMRIQRVI 264

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
                 + ++AA++AE VR GL +VP+GQ EAA ALGL       LV+LPQA+R +IP +
Sbjct: 265 RAIAGFTLFSAAYLAENVRGGLQSVPQGQTEAAKALGLNTFFVLILVVLPQALRVVIPTI 324

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALF 384
             Q+++L K++SL   VG  DL+ +  +I+      G+  E+ +    IY      ++L 
Sbjct: 325 VGQFISLFKDTSLLAIVGLVDLLGISQSILANPKFIGRYGEVYIFVAAIYWIFCYSMSLI 384

Query: 385 MNRLNAK 391
             +L  K
Sbjct: 385 SRQLEKK 391



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 19/205 (9%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G + T ++A   +I +   G L+  GR S   ++ W+   Y+E+ R +P + ++F   
Sbjct: 188 FSGLILTVFVAIISIILSFPFGVLLALGRQSNLPIIRWLSISYIELIRGLPLIGILFMAQ 247

Query: 150 KSVLSVLPIPDHS------------IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
             +  +LP                     +       GL          AK    +    
Sbjct: 248 VMLPLILPQEMRIQRVIRAIAGFTLFSAAYLAENVRGGLQSVPQGQTEAAKALGLNTFFV 307

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           ++L +    L        G+ + L             L ++ L   L   + +L    FI
Sbjct: 308 LILVVLPQALRVVIPTIVGQFISL-------FKDTSLLAIVGLVDLLGISQSILANPKFI 360

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIA 282
           G       F++    + CY+ + I+
Sbjct: 361 GRYGEVYIFVAAIYWIFCYSMSLIS 385


>gi|319940825|ref|ZP_08015164.1| polar amino acid ABC transporter [Sutterella wadsworthensis
           3_1_45B]
 gi|319805707|gb|EFW02488.1| polar amino acid ABC transporter [Sutterella wadsworthensis
           3_1_45B]
          Length = 227

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K    +  LYI          LVL+   + L     VL     +    +    ++  I 
Sbjct: 48  VKWLSYIAKLYIDLMRAVP---LVLVLFWFFL-LMPEVLKIAFGLDHPVMIGANLTAIIT 103

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
              + AA+ AEI+R+G+ ++ RGQ  AA  LGLT+ +  R V+LPQA+R+++P L +Q +
Sbjct: 104 FVLFEAAYFAEIMRAGIQSIGRGQFFAATGLGLTYGQTMRYVILPQAIRNMLPVLLTQTI 163

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            L +++SL   +  +D +     I  + GQ + +       YLS+S+ +++ + RL  K+
Sbjct: 164 ILFQDTSLVYVISGSDFMGAVAKIAQRDGQLVLMYSFAALCYLSVSLSLSMLIRRLQTKM 223

Query: 393 ALKE 396
           +   
Sbjct: 224 SAAR 227


>gi|213971835|ref|ZP_03399937.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
 gi|301383372|ref|ZP_07231790.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato Max13]
 gi|302064065|ref|ZP_07255606.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato K40]
 gi|302134967|ref|ZP_07260957.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213923381|gb|EEB56974.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato T1]
          Length = 221

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + +           ++     +LG+ L +     +     K      +L I  
Sbjct: 5   FDFTPVLQNIDVLLRGALFTLELTAIGTLLGVSLGIVG---AVVRAWKIQPFATILAIYV 61

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI   P LV +   +           F          E+ +  +A+     A+  EI+R
Sbjct: 62  ELIRNTPFLVQLFFIF-----------FGLPSLGVQISEWQAAVLAMVINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L      I ++  ++ E  ++   IYL+++++I   +  +  + 
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLIRQLLAWIGRRY 216



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQNIDVLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATILAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|116255413|ref|YP_771246.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260061|emb|CAK03160.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 241

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +  +G VL       ++         L  +Y + F       L++  + +  
Sbjct: 24  MTLAVTATALAIGAVLGAIVAA-AKLSGNIILVTLGNVYTTVFR-GVPELLIIYLIYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G+     G    P F++  +A+   + ++ AE+ R   +A+ +G++EAA A+G
Sbjct: 82  SSAVTAIGKAMGYEGFLGLPSFIAGALAVGIISGSYQAEVFRGAFLAISKGELEAASAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +++PQ  R  IP L + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MHRGMRLRRIIMPQVFRLAIPGLGNVWQLSLKDSALISVTGLAELMRTSQVAAGSTRQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +YL L+ +     N    +
Sbjct: 202 LFFIAGGCLYLLLTSLSDRVFNGAERR 228



 Score = 37.6 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 36/71 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   ++   + T  +  + +    ++G +V A +LS N ++  +  VY  VFR +P L++
Sbjct: 14  WGALLIAATLMTLAVTATALAIGAVLGAIVAAAKLSGNIILVTLGNVYTTVFRGVPELLI 73

Query: 145 IFFLYKSVLSV 155
           I+ +Y    S 
Sbjct: 74  IYLIYFGGSSA 84


>gi|331002712|ref|ZP_08326227.1| hypothetical protein HMPREF0491_01089 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330407125|gb|EGG86629.1| hypothetical protein HMPREF0491_01089 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 227

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 97/232 (41%), Gaps = 12/232 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-HFHEKTGKALPL 221
           + L     ++   +          A + +   +LGI+ ++    L     H+K      L
Sbjct: 1   MYLGESNIMDFEFIRQVIPLYIHAALLTLKIGILGIISAIAIGLLCTLILHKKIPILKQL 60

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + I        P L+ +   Y   +  P L               +     L+    +++
Sbjct: 61  VSIYIEFSRNTPLLIQLFFIY---YGLPKL--------GIKVDADICGVFGLAFLGGSYM 109

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  RSG+  + + Q E+A++LGL+H +A   +LLPQA+    P   +  + LLK +S+ 
Sbjct: 110 CEAFRSGIETIDKIQEESALSLGLSHNQALFYILLPQAVSISTPAFVANIIFLLKETSVF 169

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A+   DL+     +I    + +E + + +F YL + + +++  + +  ++ 
Sbjct: 170 SAISLMDLMFTAKDLIGLYYKTVESLALLVFFYLIILLPVSMLGSYIERRVR 221



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           + T  +   G+I A  IG L          ++  +  +Y+E  RN P L+ +FF+Y  + 
Sbjct: 26  LLTLKIGILGIISAIAIGLLCTLILHKKIPILKQLVSIYIEFSRNTPLLIQLFFIYYGLP 85

Query: 154 SVLPIPDHSIVLPFGM 169
            +    D  I   FG+
Sbjct: 86  KLGIKVDADICGVFGL 101


>gi|315181772|gb|ADT88685.1| arginine ABC transporter, permease protein [Vibrio furnissii NCTC
           11218]
          Length = 141

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 1/133 (0%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
              +S  +    +AL+  TAA+ +++ +    A+P GQ +A  ALG+        VLLP 
Sbjct: 3   WVWLSKPWFCAMVALALNTAAYSSQLFKGAFNAIPDGQWQACRALGMNKIATL-RVLLPY 61

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+R  +P  +++ + + K +SLA  +   DL+     I  QT   + +  +    YLS++
Sbjct: 62  ALRRAVPAYSNEVILVFKGTSLASTITIMDLMGYAQRINAQTYDTLTVFGVAGLFYLSVN 121

Query: 379 IMIALFMNRLNAK 391
            ++ L   ++  K
Sbjct: 122 GLLTLVFRQIERK 134


>gi|312863467|ref|ZP_07723705.1| amino acid ABC transporter, permease protein [Streptococcus
           vestibularis F0396]
 gi|322516240|ref|ZP_08069172.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|311101003|gb|EFQ59208.1| amino acid ABC transporter, permease protein [Streptococcus
           vestibularis F0396]
 gi|322125304|gb|EFX96669.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 226

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                    SF+LG+V+S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 22  HIAVLGIFGSFLLGLVVSVI-----RHYRVPVLSQLSTAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V        + L     +++AE  RSGL AV + Q E  +++
Sbjct: 74  ----------FGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DVALGMLVVAYLLMLLPISLVFSWIERRLR 213



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 42/111 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G+  + ++G +V   R     +++ +   Y+E+ 
Sbjct: 1   MDWSIVQQYLPFYQKAFFLTLHIAVLGIFGSFLLGLVVSVIRHYRVPVLSQLSTAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +         G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEA 111


>gi|237808391|ref|YP_002892831.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500652|gb|ACQ93245.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 229

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 17/240 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF------HEKTG 216
           +   +        L     T+          F L +VL+L      +        +    
Sbjct: 1   MDFSWITHYWPLLLKGAEQTIALLVISVSLGFCLAVVLALLQVMGPKPLAKFSSGYCTLL 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL     L +G+ +L+ +    +  F  PVL +  F              +  +  
Sbjct: 61  RGTPLLVQLWLLYYGVGSLLPMIPGIRHSFMWPVLREGFFF-----------ASVTFTLN 109

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
            AA+ A ++R+ L++VP+G++EA  A G++     R V LP+A+R  +P +  + +  LK
Sbjct: 110 YAAYEAVVLRAALLSVPKGEIEAGKAFGMSRWTLIRRVWLPRAIRIALPTIAGEVVLQLK 169

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + LA  V   DL SV   I   T    E +++    Y++LS +I     R   ++ ++ 
Sbjct: 170 ATPLAFTVTVMDLYSVAYKIRQDTLLVYEPLILVAVFYVALSALIVKVFGRFERQLPVRR 229



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 50/158 (31%), Gaps = 7/158 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  L    +     +  ++   ++   K +A     Y  + R  P LV 
Sbjct: 9   YWPLLLKGAEQTIALLVISVSLGFCLAVVLALLQVMGPKPLAKFSSGYCTLLRGTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG-------MFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           ++ LY  V S+LP+                  F +               +  + S   G
Sbjct: 69  LWLLYYGVGSLLPMIPGIRHSFMWPVLREGFFFASVTFTLNYAAYEAVVLRAALLSVPKG 128

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            + +  A  +SR    +       + I+   I G   L
Sbjct: 129 EIEAGKAFGMSRWTLIRRVWLPRAIRIALPTIAGEVVL 166


>gi|327194082|gb|EGE60956.1| ABC transporter, membrane spanning protein [Rhizobium etli
           CNPAF512]
          Length = 240

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 5/213 (2%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA-LPLLYISTFLIFGLPTLVLIALKYQLH 245
             I + ++ LGIV+ L  +        K G+A L +L   T  +  +P L+LI   Y   
Sbjct: 30  ILISLGAYFLGIVIGLAGSA----GKLKGGRAILVILDFYTTAMRAVPELILIIGLYYAG 85

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D                  F++    L     A++ E++R  ++A+P GQ+EAA A G+
Sbjct: 86  TDGINRLLSALGFPPVEVNGFLAAVAVLGIVQGAYVTEVLRGAILAIPVGQIEAASAFGM 145

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
                 R ++LP  M + +P LT+ ++++ K+S+L   VG+ +L          T     
Sbjct: 146 GPWLRFRRIVLPALMPNALPGLTNLWMSVTKDSALIAVVGYQELALATRLAAGNTKHYFL 205

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                  IYL +++   +    L A     + K
Sbjct: 206 FFFAAAVIYLMITLFSNVVFGSLEAYFRRGQPK 238



 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I + + PY     +  A+L G ++T  ++        +IG    AG+L   + +  I  
Sbjct: 6   SIVELLSPYPPG--WGGALLSGALSTILISLGAYFLGIVIGLAGSAGKLKGGRAILVILD 63

Query: 131 VYVEVFRNIPPLVVIFFLYKSVL 153
            Y    R +P L++I  LY +  
Sbjct: 64  FYTTAMRAVPELILIIGLYYAGT 86


>gi|320530103|ref|ZP_08031173.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
 gi|320137536|gb|EFW29448.1| ABC transporter, permease protein [Selenomonas artemidis F0399]
          Length = 235

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 1/195 (0%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGST 261
           F   + R    + G  +   Y+S      L   +L+           V+ Q    +    
Sbjct: 38  FYFAVLRVRGRRVGGTIVRCYVSFVRGTPLILQILLLYSLLPSLLNVVVKQAGLDVNVFD 97

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F       +  + A + E  RS L+A+P+GQ+EA +A GL+       V+LPQA+ 
Sbjct: 98  AVDPFWYAVFIFTINSIALLTEAFRSALLAIPKGQLEAGLASGLSAPATYLHVILPQALV 157

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + +  +NL+K +SLA  +   D+++VG    +     IE  L    +YL L  ++
Sbjct: 158 VALPSICNITVNLIKGTSLAFLMTVKDIMAVGKIAASYGYNYIEAYLDVFVVYLVLCTIV 217

Query: 382 ALFMNRLNAKIALKE 396
            L       ++    
Sbjct: 218 QLLFAAAERRVGAFR 232


>gi|15900515|ref|NP_345119.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|111656912|ref|ZP_01407736.1| hypothetical protein SpneT_02001839 [Streptococcus pneumoniae
           TIGR4]
 gi|14972082|gb|AAK74759.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
          Length = 219

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++     +R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAV-----TRNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVTRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|322377818|ref|ZP_08052307.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
 gi|321281241|gb|EFX58252.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           M334]
          Length = 219

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V + ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLATLIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYHIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ AT+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLATLIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|239944757|ref|ZP_04696694.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239991222|ref|ZP_04711886.1| putative glutamate ABC transporter permease protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291448219|ref|ZP_06587609.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
 gi|291351166|gb|EFE78070.1| glutamate transporter permease [Streptomyces roseosporus NRRL
           15998]
          Length = 215

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 17/210 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   + + VLG+V++ F     R       +     +++      L              
Sbjct: 23  AVSSLIALVLGVVVAGF-----RVSPVPPLRYFGTAWVTLMRNTPLTL--------LFLI 69

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              V+ +  F G       F+   +AL  YT++F+ E VRSG+  VP GQ EAA ++G+T
Sbjct: 70  FFFVVPEILFPG----MSPFVLGSLALGFYTSSFVCEAVRSGINTVPLGQAEAARSIGMT 125

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  ++V+LPQA R++IPPL+S ++ L KNS++A A   A+L      + ++    + +
Sbjct: 126 FAQTLQIVVLPQATRTVIPPLSSIFIALTKNSAIAGAFSNAELFGWQKLMSDKGYDIVPV 185

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL ++  I+     L  ++ +  
Sbjct: 186 FIWVAIGYLIITFTISGLFRLLERRMEVAR 215



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A   GF+ T  +     + A ++G +V   R+S    + +    +V + RN P  ++   
Sbjct: 10  AFRDGFIGTVSITAVSSLIALVLGVVVAGFRVSPVPPLRYFGTAWVTLMRNTPLTLLFLI 69

Query: 148 LYKSVLSVLPIPDHSIVL 165
            +  V  +L       VL
Sbjct: 70  FFFVVPEILFPGMSPFVL 87


>gi|149203650|ref|ZP_01880619.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. TM1035]
 gi|149142767|gb|EDM30809.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. TM1035]
          Length = 217

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 17/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   V   +LGI+  +   +L              L     +   +P L+ + L    
Sbjct: 24  VTAISVVIGTLLGILFGVIRMQLGPVLAAP-------LTFFLDIFRSVPLLIQLVLG--- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F  +        F    I LS YT+A+ AEIVR G+ AVP     AA +LG
Sbjct: 74  -------NAFVGMVLQLQISGFTVACIVLSLYTSAYCAEIVRGGIDAVPEITRRAARSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R ++LP A R  +P      L ++K+S+L   V   +L+     +I +  + +
Sbjct: 127 LTWGQDMRYIVLPLATRVALPSWIGLALGVMKDSALVYVVQVTELLKSTQILITRLQEPL 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++LI    Y  +S  +A F   L  + +
Sbjct: 187 FLLLICGAFYFVISFPLARFGGYLEKRWS 215


>gi|148988973|ref|ZP_01820373.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147925470|gb|EDK76547.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
          Length = 219

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVPVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|313896702|ref|ZP_07830250.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312974619|gb|EFR40086.1| ABC transporter, permease protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 235

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 1/195 (0%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF-IGGST 261
           F   + R    + G  +   Y+S      L   +L+           V+ Q    +    
Sbjct: 38  FYFAVLRVRGRRVGGTIVRCYVSFVRGTPLILQILLLYSLLPSLLNVVVKQVGLDVNVFD 97

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F       +  + A + E  RS L+A+P+GQ+EA +A GL+       V+LPQA+ 
Sbjct: 98  AVDPFWYAVFIFTINSIALLTEAFRSALLAIPKGQLEAGLASGLSAPATYLHVILPQALV 157

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P + +  +NL+K +SLA  +   D+++VG    +     IE  L    +YL L  ++
Sbjct: 158 VALPSICNITVNLIKGTSLAFLMTVKDIMAVGKIAASYGYNYIESYLDVFVVYLVLCTIV 217

Query: 382 ALFMNRLNAKIALKE 396
            L       ++    
Sbjct: 218 QLLFAAAERRVGAFR 232


>gi|190894984|ref|YP_001985277.1| putative amino acid ABC transporter permease [Rhizobium etli CIAT
           652]
 gi|218516890|ref|ZP_03513730.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
 gi|190700645|gb|ACE94727.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 220

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 17/230 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +    F        L    +++   A   +   VLG  L+L           K  +   +
Sbjct: 2   NYTFDFSAVSIAPLLQGLWVSLQLTAAANIIGIVLGFGLALLIM-----SPIKIVRLPFM 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L++  F     P +V I     + +  P+L                   +AL     AF 
Sbjct: 57  LFVEFF--RCTPAIVQIV---WIFYCVPMLF-------DVFLDPMTMGIMALGLNLMAFN 104

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+ + AVPR Q++A IALGL   +    ++ P A R+ IP L +  + + + S+L 
Sbjct: 105 AEAYRASIQAVPREQLDAGIALGLNPLQRVLYIVFPTAFRASIPVLLTNGIVIFQQSALV 164

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             V   DL+  G T+  +T + IE   +   IY ++S  I   +  L  +
Sbjct: 165 AIVAIQDLMYQGKTLATETYRPIETFTVVALIYFAVSFPITQIVGLLERR 214



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 2/160 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  L  +  I   ++G  +    +S  K+V     ++VE FR  P +V I ++
Sbjct: 15  LLQGLWVSLQLTAAANIIGIVLGFGLALLIMSPIKIVRLPFMLFVEFFRCTPAIVQIVWI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FATR 206
           +  V  +  +    + +       N           +   +       GI L L      
Sbjct: 75  FYCVPMLFDVFLDPMTMGIMALGLNLMAFNAEAYRASIQAVPREQLDAGIALGLNPLQRV 134

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           L   F      ++P+L  +  +IF    LV I     L +
Sbjct: 135 LYIVFPTAFRASIPVLLTNGIVIFQQSALVAIVAIQDLMY 174


>gi|212213033|ref|YP_002303969.1| arginine transport system permease protein [Coxiella burnetii
           CbuG_Q212]
 gi|212011443|gb|ACJ18824.1| arginine transport system permease protein [Coxiella burnetii
           CbuG_Q212]
          Length = 221

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 7/203 (3%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + + + G+ L++  T L+     K  K++ +  I+ F+      LVL A+ + 
Sbjct: 16  MVTLAVSLCAVIFGMGLAILFT-LTEFSQLKFLKSI-VKSITAFIRGLPELLVLFAIYFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L        S     F +  +AL    AA+  + +R  L+A+P+GQ EA  A+
Sbjct: 74  GSALLTKL-----FHRSVQVSAFSAGVLALGMIFAAYAVQTLRGALLAIPKGQTEAGKAM 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL      + ++LPQA    +P L + +L LLK+S+L   +G  DL++      + T + 
Sbjct: 129 GLPGWIIFKRIVLPQAWHHALPGLGNLWLVLLKDSALVALIGLGDLMNKAQLAASTTREP 188

Query: 364 IEIILIWMFIYLSLSIMIALFMN 386
            +  ++  F++L L+ +  L + 
Sbjct: 189 FKFYVMAAFLFLLLTSVSQLVLK 211


>gi|330814054|ref|YP_004358293.1| glutamate Aspartate transport system permease protein GltK
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487149|gb|AEA81554.1| glutamate Aspartate transport system permease protein GltK
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 347

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 60/282 (21%), Positives = 119/282 (42%), Gaps = 19/282 (6%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           + V + R    +     +++  L+ +          F      + +      +     IF
Sbjct: 63  INVWIKRFTYGMYPNDQIWRINLAFVIFFISIGSYFFVSSKIKKYIFIFLTLVFPFLAIF 122

Query: 191 VFS------------FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
           +F                G+ L+LF +  S  F    G  L +   S   +    ++  I
Sbjct: 123 LFHGGSLGLEEVETRVWGGLFLTLFISVFSIIFCFPIGVLLAMGRRSNLPVIKYFSIGFI 182

Query: 239 ALKYQLHFDKPVLGQFN----FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            L   +     +         F+   T   + + + IA++ + +A+IAE+VR GL A+PR
Sbjct: 183 ELWRGVPLITVLFMAAVMFPVFLPSGTNLDKLIRVIIAITLFESAYIAEVVRGGLQAIPR 242

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS--- 351
           GQ +AA ++G+ + K+  L++LPQA++ +IP + + ++ L K++ L + VG  +L+    
Sbjct: 243 GQYDAANSIGMGYWKSHLLIILPQALKIVIPGVANTFIALFKDTPLILVVGLMELLGMVN 302

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +  T     G A E  +   F+Y      ++ +   L  K+ 
Sbjct: 303 MAKTNPAWLGLATEGYVFAAFVYFIFCFSMSRYSLSLENKLK 344



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 33/74 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T +++   +I    IG L+  GR S   ++ +    ++E++R +P + V+F     
Sbjct: 141 GLFLTLFISVFSIIFCFPIGVLLAMGRRSNLPVIKYFSIGFIELWRGVPLITVLFMAAVM 200

Query: 152 VLSVLPIPDHSIVL 165
               LP   +   L
Sbjct: 201 FPVFLPSGTNLDKL 214


>gi|260461733|ref|ZP_05809979.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|319785285|ref|YP_004144761.1| polar amino acid ABC transporter inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032374|gb|EEW33639.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|317171173|gb|ADV14711.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 268

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 13/254 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L    L ++      +   +        ++    ++       VF FVL + L L A 
Sbjct: 22  VVLIVIGLVLITAAAVFMRWDWLADYYMLAIAGLWRSIWILIVTCVFGFVLALPLGL-AQ 80

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP- 264
            +   +     KA         +I G P L+ I L Y       +  Q+ +I  S + P 
Sbjct: 81  VVGPSWLSLPAKAFCT------VIRGTPLLLQIWLLYYG--LGSLFPQYPWIRESDIWPL 132

Query: 265 ---EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +    +AL+   A ++ E++R     VP GQ+EA  A G+   K  R V LPQA+ 
Sbjct: 133 VRQAWPYAVLALTLSFAGYVGEVMRGAFAGVPSGQLEAGRAFGMNRWKLFRRVWLPQAIH 192

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L  + +  LK++ L   +   DL +V   +   T    E +L+    Y+ L+ ++
Sbjct: 193 KALPTLAGETVMQLKSTPLVATITVVDLYAVSARVRQDTLVIYEPLLLLALTYMVLTGLL 252

Query: 382 ALFMNRLNAKIALK 395
               +R+ A+I ++
Sbjct: 253 VWIFSRIEARIPVR 266



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 7/156 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    + G   + W+     +   ++   +G  ++     ++   + +  V R  P L+ 
Sbjct: 47  YYMLAIAGLWRSIWILIVTCVFGFVLALPLGLAQVVGPSWLSLPAKAFCTVIRGTPLLLQ 106

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I+ LY  + S+ P              +   L          A    F+  +G V+   A
Sbjct: 107 IWLLYYGLGSLFPQYPWIRE------SDIWPLVRQAWPYAVLALTLSFAGYVGEVM-RGA 159

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
                    + G+A  +     F    LP  +  AL
Sbjct: 160 FAGVPSGQLEAGRAFGMNRWKLFRRVWLPQAIHKAL 195


>gi|227508307|ref|ZP_03938356.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227511319|ref|ZP_03941368.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227523525|ref|ZP_03953574.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227085472|gb|EEI20784.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227089290|gb|EEI24602.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227192196|gb|EEI72263.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 229

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 94/229 (41%), Gaps = 18/229 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            + L           +    KI   + + GI+L +    L R F  +  + +  LY+  F
Sbjct: 7   SVLLEGTNFMRLLGGLWVTVKIAAVALIAGIILGIALGVL-RTFKNRPLRIVLRLYLEFF 65

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +     L+ +      ++  P    FN        P      +  + +  A +++IVR 
Sbjct: 66  RVVPTVVLLFLF-----YYILPKQMNFNL-------PADQLATLVFALWVGAEMSDIVRG 113

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            LI+VP+ Q+E+  A+GL+  +    VL+PQ++   IP   +    ++K +S+ + +   
Sbjct: 114 ALISVPKHQIESGKAIGLSRFQLYWYVLIPQSINLEIPATINLATRVIKTTSILLLISVM 173

Query: 348 DLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           D++++G  II             +  +    Y  +   ++ +  RL  K
Sbjct: 174 DVINIGQQIIEANNHTYPTGVFWVYGLIFLFYFLIDYPLSWWAKRLEKK 222



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 42/97 (43%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +    + +    +L G   T  +A   +I   I+G  +G  R   N+ +  + R+Y+E F
Sbjct: 6   ISVLLEGTNFMRLLGGLWVTVKIAAVALIAGIILGIALGVLRTFKNRPLRIVLRLYLEFF 65

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R +P +V++F  Y  +   +     +  L   +F   
Sbjct: 66  RVVPTVVLLFLFYYILPKQMNFNLPADQLATLVFALW 102


>gi|332042180|gb|EGI78506.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 224

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 14/220 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F + +  +   +    + T   +      LG    L    +      +  +   + +I 
Sbjct: 8   FFNLPIYGQVFPYLLQGLWTTVWLSALVIPLGAAGGLGLALVLNQSTRRAPRWAAVAFID 67

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F  F    L++      ++F  P L            P+  ++ +      AA+ AE+ 
Sbjct: 68  FFRAFPPLVLLVF-----VYFGLPFL--------GWEIPKLGAVLLGFLLNNAAYYAEVF 114

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL AVP GQMEAA + GLT  +A R V++PQA+++++P L S  + ++K +++A  VG
Sbjct: 115 RAGLEAVPSGQMEAARSTGLTRMQALRHVVVPQAVKNVLPDLVSNSIEVVKLTTIASVVG 174

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             +L+       +       ++L    +YL L   +  +M
Sbjct: 175 LPELLRAARDAQSLVYNPSPVVL-AALMYLVLLWPLTRWM 213


>gi|327193818|gb|EGE60695.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CNPAF512]
          Length = 252

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 18/217 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             N  L     T+  +A     +F   I+ +L     SR           L +  T L++
Sbjct: 21  YPNGPLGGLANTLILSALSITLAFPASILFALARLSKSRV----------LRWPVTALVY 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               + L+ L    +F  P+L   +        P F+++   L  Y +AF++E+VR+G++
Sbjct: 71  FTRGVPLLMLILWSYFLVPLLTGADV-------PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+AA ALG ++  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL 
Sbjct: 124 ALGPGQMDAARALGHSYMGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMN 386
                + NQ   Q  ++ LI   +Y ++   +  F N
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220



 Score = 43.4 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+   +  A     L    RLS ++++ W     V   R +P L++I + Y
Sbjct: 26  LGGLANTLILSALSITLAFPASILFALARLSKSRVLRWPVTALVYFTRGVPLLMLILWSY 85

Query: 150 KSVL 153
             V 
Sbjct: 86  FLVP 89


>gi|325293714|ref|YP_004279578.1| octopine transport system permease protein occM [Agrobacterium sp.
           H13-3]
 gi|325061567|gb|ADY65258.1| octopine transport system permease protein occM [Agrobacterium sp.
           H13-3]
          Length = 229

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 5/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              +              + V S  +G +L++     ++    +  K L   Y + F   
Sbjct: 5   WIAKYWPLLLSGAWQTLALLVISVSIGFLLAIGL-AFAQVSGGRVTKILARAYCTFF--R 61

Query: 231 GLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P L+ + L Y     F   + G         +   F    ++ +   AA+ AE++R  
Sbjct: 62  GTPLLIQLWLLYYGVGSFLPMIPGLRQSFMWPVLREGFFFAAVSFTLNYAAYEAEVLRGA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L+AVP+G++EA  A G+      R + LP+A+R  +P +  + +  LK + LA  V   D
Sbjct: 122 LLAVPKGELEAGRAFGMGRFTLIRRIWLPRAIRIALPTIAGEVVMQLKATPLAFTVTVMD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L +V   +   T    E +++    YL L+ +IA     +  ++ ++ 
Sbjct: 182 LYAVAYKVRQDTLLVYEPLIVVTVFYLILTAIIARCFGLIEQQVPVRR 229



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 34/104 (32%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  L    +    ++   +   ++S  ++   + R Y   FR  P L+ 
Sbjct: 9   YWPLLLSGAWQTLALLVISVSIGFLLAIGLAFAQVSGGRVTKILARAYCTFFRGTPLLIQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           ++ LY  V S LP+            L               A 
Sbjct: 69  LWLLYYGVGSFLPMIPGLRQSFMWPVLREGFFFAAVSFTLNYAA 112


>gi|301630317|ref|XP_002944268.1| PREDICTED: hypothetical protein LOC100492530 [Xenopus (Silurana)
           tropicalis]
          Length = 511

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 15/179 (8%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTL--------VLIALKYQLHFDKPVLGQFNFIGGST 261
           +   +  + +PLL         +P +         L+ + + L F            G  
Sbjct: 76  NAWVEFCRNIPLLVHIFLWYHVIPAMFPALKALPGLVLVVFALGFFTSARIAEQVRSGIQ 135

Query: 262 VSPE---FMSLYIALSCY----TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
             P    +  + +  + +     AA+ +EI+R+G+ ++ RGQ+ A  ALG+T+ +  RLV
Sbjct: 136 SLPRGQRYAGMALGFTTFQYYRYAAYFSEIMRAGIQSIARGQVFAGQALGMTYGQNMRLV 195

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +LPQA+R+++P L +Q + L +++SL  A+G  D++          G+ IE  L    +
Sbjct: 196 ILPQALRNMLPVLLTQTIILFQDTSLVYAIGAYDMLKGFEVAGKNFGRPIEAYLAAAVL 254



 Score = 39.5 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIPPL 142
           +Y   +L  +  T  ++   ++ A ++G ++G  R L  +     +   +VE  RNIP L
Sbjct: 29  TYLDWMLSAWGWTVSVSLLSLLVALVVGVVIGTLRTLEDSPWTVRLGNAWVEFCRNIPLL 88

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           V IF  Y  + ++ P       L   +F
Sbjct: 89  VHIFLWYHVIPAMFPALKALPGLVLVVF 116


>gi|329937973|ref|ZP_08287455.1| amino acid ABC transporter transmembrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329302930|gb|EGG46819.1| amino acid ABC transporter transmembrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 216

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 88/221 (39%), Gaps = 18/221 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                              +T+   A   + SF LG+V +L     +R      G     
Sbjct: 2   KWDWGAVADFMPHFWDGLLVTLQALALGSLISFALGLVWALLMRTPTRWVRWPVG----- 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             + T  I   P LV +   + +               +       +   A+  + + + 
Sbjct: 57  --VVTEFIRNTPLLVQLFFLFYV-----------LPEWNITFSALTTGVFAIGLHYSTYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++ R+G+ AVP GQ EAA AL L  R+    V+LPQA+R ++P L +  +++LK++ L 
Sbjct: 104 MQVYRAGIEAVPVGQWEAATALNLPLRRTWTAVILPQAIRRVVPALGNYVISMLKDTPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +A+   +++        +  Q  E + +    ++ +S   +
Sbjct: 164 MAITVLEMLGQARLFSQEHFQFTEPLTVIGVAFILISYPAS 204



 Score = 43.4 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 32/102 (31%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T      G + +  +G +      +  + V W   V  E  RN P LV +FFL
Sbjct: 15  FWDGLLVTLQALALGSLISFALGLVWALLMRTPTRWVRWPVGVVTEFIRNTPLLVQLFFL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           +  +              F + L+    +         A   
Sbjct: 75  FYVLPEWNITFSALTTGVFAIGLHYSTYTMQVYRAGIEAVPV 116


>gi|327191404|gb|EGE58429.1| octopine ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 241

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 2/207 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   +  +G VL       ++        A   +Y + F       L++  + +  
Sbjct: 24  MTLAVTATALAIGAVLG-AIVAGAKLSGNPLLVAFGNVYTTVFR-GVPELLIIYLIYFGG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G+     G    P F +  +A+   + ++ AE+ R   +A+ +G++EAA A+G
Sbjct: 82  SSAVTSIGKVMGYEGFLGLPSFAAGALAVGIISGSYQAEVFRGAYLAIAKGELEAASAIG 141

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +      R +++PQ +R  IP L + +   LK+S+L    G A+L+         T Q  
Sbjct: 142 MHRGMRFRRIIIPQVLRFAIPGLGNVWQLSLKDSALISVTGLAELMRTSQVAAGSTRQYF 201

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +YL L+ +     N    +
Sbjct: 202 LFFIAGGCLYLILTSLSDRIFNGAERR 228



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 35/71 (49%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +++  + T  +  + +    ++G +V   +LS N L+     VY  VFR +P L++
Sbjct: 14  WGALLILAALMTLAVTATALAIGAVLGAIVAGAKLSGNPLLVAFGNVYTTVFRGVPELLI 73

Query: 145 IFFLYKSVLSV 155
           I+ +Y    S 
Sbjct: 74  IYLIYFGGSSA 84


>gi|288905474|ref|YP_003430696.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|306831557|ref|ZP_07464715.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978464|ref|YP_004288180.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288732200|emb|CBI13765.1| putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
 gi|304426342|gb|EFM29456.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178392|emb|CBZ48436.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 230

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 7/207 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +   +L   L       S+   EK+  +    Y+  F++   P +VLI L +   + 
Sbjct: 24  LWVLVLTILFGSLLGLFLAWSQLSGEKSLSSFARGYV--FILRCTPPIVLIFLVF---YG 78

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P   ++            + + +A++   AA I+E+ +S   A+P+GQ+EA +++GLT 
Sbjct: 79  LPRFLEWWLGIDVNGWSRSVFVILAMTLLFAASISEVFKSSYQALPKGQLEAGLSIGLTD 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIE 365
            +    +LLPQA R  +P +T+  +NLLK+ +LA  +G  DL+  G  +I++     ++E
Sbjct: 139 YQTFVRILLPQAFRIALPNITTAIINLLKDIALAYTIGLVDLMGAGNLVISRNLGNYSLE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
                  IY  L++++A+  + +  ++
Sbjct: 199 TYTAVAIIYWVLALILAVGTHFIENEL 225


>gi|42519234|ref|NP_965164.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41583522|gb|AAS09130.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|329667256|gb|AEB93204.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 225

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T+  I V S ++G+ L      L R    +  K +  +Y+  F I  +PT+VL+ L Y 
Sbjct: 23  WTSVWIAVLSLIIGLALGALFGVL-RTSKSRLVKVIFRIYLEFFRI--VPTVVLLFLFYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +  QFN        P  +   IA + + +A  ++IVR  LI+VP+ Q E+ +AL
Sbjct: 80  I-----LPRQFNL-----NWPASVMAVIAFALWVSAEFSDIVRGALISVPKIQRESGLAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    VLLPQA +  +P   +    ++K +SL + +   D+++VG  I+    Q 
Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189

Query: 364 -----IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +  F+Y  +   ++L+  RL+ +
Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   + W+A   +I    +G L G  R S ++LV  I R+Y+E FR +P +V++F  
Sbjct: 18  LLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRIVPTVVLLFLF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   + V+    F   
Sbjct: 78  YYILPRQFNLNWPASVMAVIAFALW 102


>gi|307706282|ref|ZP_07643095.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus mitis SK321]
 gi|307618315|gb|EFN97469.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus mitis SK321]
          Length = 226

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRITILAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAVSQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + ++L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPVSLVFSWIERRLR 213



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F+ T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFLLTLHIAVWGILGSFLLGLIVSIIRHYRITILAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEA 111


>gi|307246271|ref|ZP_07528352.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306852880|gb|EFM85104.1| Arginine ABC transporter permease protein artM [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 227

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 10/213 (4%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   + +FVL ++L+   +  S+           ++     L  G P LV   L Y  
Sbjct: 19  LTAVSLLIAFVLAVILTFLLSMESKLIK-------AIVNGYLMLFTGTPLLVQFFLIY-- 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           H         +      +S  +    +AL+  +AA+  ++    + A+P+GQ E   ALG
Sbjct: 70  HGPGQFQWIVDSFAWQFLSDAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWETCAALG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+       +L+  A+R  +P  +++ + + K +SLA  +   D++     +      AI
Sbjct: 130 LSRLDTL-KILISYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGTEYDAI 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I  I   IYL ++ ++ + + R+ AK+   E+
Sbjct: 189 TIYGIAGAIYLVITGIMTILLRRVEAKVLAFER 221


>gi|257082920|ref|ZP_05577281.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
 gi|256990950|gb|EEU78252.1| ABC-type amino acid transport system [Enterococcus faecalis E1Sol]
          Length = 215

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 4/159 (2%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L ++  ++  + P L     I          +  ++ + +T A +AEI+R GL  V +G
Sbjct: 51  LLASIYVEVVRNIPNLLWIYVIFLIFKIKSTPAGIVSFTVFTTAALAEIIRGGLNGVDKG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q+EAA + G ++ +    ++LPQA+R+++P + SQ++ ++K++S L   +   +L     
Sbjct: 111 QIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSY 170

Query: 355 TI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +     QTGQ   I  I   IY  ++  I+ F   L+ 
Sbjct: 171 ILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSR 209



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +++F  +I +TI GT++   R   N  +  +  +YVEV RNIP L+ I
Sbjct: 10  FQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWI 69

Query: 146 FFLYKSV 152
           + ++   
Sbjct: 70  YVIFLIF 76


>gi|71734611|ref|YP_272589.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257481839|ref|ZP_05635880.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289624458|ref|ZP_06457412.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289651581|ref|ZP_06482924.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|71555164|gb|AAZ34375.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|320322171|gb|EFW78267.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320331822|gb|EFW87760.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330866608|gb|EGH01317.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330986784|gb|EGH84887.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009474|gb|EGH89530.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 221

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 98/226 (43%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + +           ++     +LG+ L +    + R +  +    +  +Y+  
Sbjct: 5   FDFTPVLQNIDVLLRGALFTLELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE- 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI   P LV +   +           F          E+ +  +A+     A+  EI+R
Sbjct: 63  -LIRNTPFLVQLFFIF-----------FGLPSLGVQISEWQAAVLAMVINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L      I ++  ++ E  ++   IYL+++++I   +  +  + 
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLIRQLLAWIGRRY 216



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQNIDVLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|33863168|ref|NP_894728.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9313]
 gi|33635085|emb|CAE21071.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9313]
          Length = 297

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 16/262 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+        +    P        P     ++       +    + K+ +   +L  V+ 
Sbjct: 32  LIRTDMGLSFLWLGRPAGFALAEHPLSYRPSDSYAWALCMGWLNSLKVILCGLILATVIG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG--- 258
           + A   +R       +A+   Y+   LI  +P L+ +   Y + F          +G   
Sbjct: 92  VLAGA-ARSSRNLLLRAMSSGYV--ALIRQIPLLLQLLFWYFVAFLSLSGTPLAPLGALI 148

Query: 259 ----------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                     G  +S EF +L + LS +TAA IAEIVR GL +VP GQ EA  +LGL  R
Sbjct: 149 RVSNQGIELLGLHLSVEFSALLVGLSVFTAASIAEIVRGGLNSVPSGQWEAFRSLGLPER 208

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
              R V+LPQA+ +I+P LTSQYLNL KNS+LA+AVG+AD+ +V  T I QTG+AIE   
Sbjct: 209 FGLRRVVLPQALPAILPGLTSQYLNLAKNSTLAIAVGYADVYAVSDTTITQTGRAIEGFF 268

Query: 369 IWMFIYLSLSIMIALFMNRLNA 390
           + +  +L L+++I   M  LN 
Sbjct: 269 LLLISFLLLNLLITGGMEVLNR 290



 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 6/204 (2%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R  +  +Q+ +AL L  I    +NN+  N+ ++++ L   +L   AGF + +  + Y   
Sbjct: 3   RSQHFCLQVGVALALLTILGVLINNLAVNLIRTDMGLSFLWLGRPAGFALAEHPLSYRPS 62

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SYA A+ +G++N+  +   G+I AT+IG L GA R S N L+  +   YV + R IP L
Sbjct: 63  DSYAWALCMGWLNSLKVILCGLILATVIGVLAGAARSSRNLLLRAMSSGYVALIRQIPLL 122

Query: 143 VVIFFLYKSVLSV------LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           + + F Y             P+     V   G+ L    LS     +     +F  + + 
Sbjct: 123 LQLLFWYFVAFLSLSGTPLAPLGALIRVSNQGIELLGLHLSVEFSALLVGLSVFTAASIA 182

Query: 197 GIVLSLFATRLSRHFHEKTGKALP 220
            IV     +  S  +       LP
Sbjct: 183 EIVRGGLNSVPSGQWEAFRSLGLP 206


>gi|170749710|ref|YP_001755970.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170656232|gb|ACB25287.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 249

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 63/252 (25%), Positives = 113/252 (44%), Gaps = 9/252 (3%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           +I  +      +      +  + +  +  +R ++   +T+       + S V+G V +L 
Sbjct: 1   MIATIQAWFQQLYETTGFNFTVFYDPYDWDRYVAGLRMTLLLGISTILASLVIGAVGALL 60

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTV 262
            +  SR           L+     +    P LV I   Y  L    P +   + +    +
Sbjct: 61  QSGPSRVLR-------ALVNGFVVVFRNTPPLVQIFFFYFGLGTLLPDIRSADGLRAPIL 113

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           +       I+LS +  AF  EI RSG+ AVPR  +EAA ALG T  KA R V+LP A+R 
Sbjct: 114 N-NVQWAIISLSLFAGAFNVEIFRSGIEAVPRTTVEAAEALGYTRFKAYRYVVLPLALRV 172

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L +  +NLLK ++LA A+   + +     I +++   +E++L+ +  Y  L  ++ 
Sbjct: 173 CLPALNNNLINLLKTTTLAYAIAVPETLYAVKQIWSESQNVLEMMLVLLATYAVLVGVLV 232

Query: 383 LFMNRLNAKIAL 394
             M+R    + +
Sbjct: 233 WIMHRWERALRI 244



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +      L E  GF       PY          + G   T  L  S ++ + +IG +   
Sbjct: 5   IQAWFQQLYETTGFNFTVFYDPYD-----WDRYVAGLRMTLLLGISTILASLVIGAVGAL 59

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
            +   ++++  +   +V VFRN PPLV IFF Y  + ++LP    +  L   +  N + 
Sbjct: 60  LQSGPSRVLRALVNGFVVVFRNTPPLVQIFFFYFGLGTLLPDIRSADGLRAPILNNVQW 118


>gi|145297673|ref|YP_001140514.1| ABC-type glutamine/glutamate transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142850445|gb|ABO88766.1| ABC-type glutamine/glutamate transporter, permease protein
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 221

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 9/212 (4%)

Query: 190 FVFSFVLGIVLSLFATRLSRH----FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           F +SF+LG + +                 T   + LL ++   +        I    +L 
Sbjct: 3   FDWSFILGTLPAFGKAVWVTLQLGAMVIFTSLGVALLNVTLLSLQKPLLAAFIRGYVELA 62

Query: 246 FDKPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            + P+L Q  F+             F +  IA++     ++ E +R+G+ AVP  Q+EA 
Sbjct: 63  RNTPLLIQLFFLYFGLPALGLSPSGFATAVIAMTFLGGGYLTEALRAGIQAVPTSQLEAG 122

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+GL+  +  R V LPQA  + +P L + ++ LLK +++A AV   +L+      I   
Sbjct: 123 RAIGLSRWQLLRHVQLPQAWLASLPALFANFIFLLKETTVASAVAVPELLYTTKNYIALY 182

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +  E++ +   + + + + ++L +  L  ++
Sbjct: 183 YKTYEMLAVLTLMCVLIFLPLSLALRALERRL 214


>gi|84515092|ref|ZP_01002455.1| putative glutamine ABC transporter permease protein [Loktanella
           vestfoldensis SKA53]
 gi|84511251|gb|EAQ07705.1| putative glutamine ABC transporter permease protein [Loktanella
           vestfoldensis SKA53]
          Length = 296

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 13/248 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ ++  S      I      +   +    R L    + M     +     V  +VL++ 
Sbjct: 52  LMAWVVTSAAQWPRIKLQFFSIDAMIAAFPRVLQGFWVNMQVWLTVLACVLVWALVLAVV 111

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             R  R       + + ++YI  F       LVL+        + P L       G+   
Sbjct: 112 --RSLRAPWFAPFRLMVVIYIDIFRGVPALLLVLLFGFGIPALNLPGLPNSGLFWGA--- 166

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
                   A+    AA++AEI RSG+ AV  GQ  AA +LGL+  +  R  +LPQA+R++
Sbjct: 167 -------FAMVLSYAAYVAEIYRSGIDAVHEGQRAAAKSLGLSEWQTLRYAILPQALRNV 219

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +P L +  + L K+ +L   +G  D V         T      +++   ++L  +I +A 
Sbjct: 220 VPALMNIVVALQKDVALLSVIGVRDAVREAQIYTATTFNY-SSLIVAAALFLLATIPMAR 278

Query: 384 FMNRLNAK 391
             + L  +
Sbjct: 279 LADYLTRR 286


>gi|225854140|ref|YP_002735652.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
 gi|225723253|gb|ACO19106.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae JJA]
          Length = 219

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNSVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNSVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|148989075|ref|ZP_01820475.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147925572|gb|EDK76649.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP6-BS73]
          Length = 206

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 18/211 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y
Sbjct: 1   MHIAVWGILGSFLLGLIVSII-----RHYRILVLSQVATAYIE--LSRNTPLLIQLFFLY 53

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F       V    +   + L     +++AE  RSGL A+ + Q E  +A
Sbjct: 54  -----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLA 102

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    +
Sbjct: 103 IGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYE 162

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               + + +  YL + + I+L  + +  ++ 
Sbjct: 163 TDIALAMLVVAYLIMLLPISLVFSWIERRLR 193



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 38/91 (41%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ + ++G +V   R     +++ +   Y+E+ RN P L+ +FFLY  +  +  +
Sbjct: 3   IAVWGILGSFLLGLIVSIIRHYRILVLSQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV 62

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
               +    G+          +      A  
Sbjct: 63  LSSEVCATLGLVFLGGSYMAESFRSGLEAIS 93


>gi|86605964|ref|YP_474727.1| polar amino acid ABC transporter permease [Synechococcus sp.
           JA-3-3Ab]
 gi|86554506|gb|ABC99464.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. JA-3-3Ab]
          Length = 401

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 18/258 (6%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +   +++  +L +        + P    +    LS   LT+   A   +  F +G++L+L
Sbjct: 159 LASIWVWALILPLCLELLLGNLGPNWPAVRAEQLSGLLLTLILAAAAMIIGFPIGVLLAL 218

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                      +  +ALP++ I   L+  L   V +       +         F  G   
Sbjct: 219 ----------GRANRALPVIRIFCTLVIELVRGVPLTTILFAAWLL-----VPFFLGGIS 263

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
               +   +A   +TA ++AE VR GL ++P GQ+EAA ALGL   + T LV+LPQA+R+
Sbjct: 264 VNLIIRAEVAFILFTAVYVAEDVRGGLQSIPLGQLEAARALGLNPFQVTALVILPQALRA 323

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSI 379
            +P L +++L L K++SL   VG  DL+  G  +    N  G   E++     IY     
Sbjct: 324 AVPALVNEFLTLFKDTSLVFIVGLIDLLQAGRVVFTNPNWLGTQREVLFFIGLIYFICCF 383

Query: 380 MIALFMNRLNAKIALKEK 397
            +A    ++   + L ++
Sbjct: 384 AMAYAAQQVEKALGLGKR 401


>gi|301799735|emb|CBW32301.1| putative amino-acid ABC transporter integral membrane protein
           [Streptococcus pneumoniae OXC141]
          Length = 206

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 92/211 (43%), Gaps = 18/211 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y
Sbjct: 1   MHIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIHLFFLY 53

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F       V    +   + L     +++AE  RSGL A+ + Q E  +A
Sbjct: 54  -----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLA 102

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    +
Sbjct: 103 IGLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYE 162

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               + + +  YL + + I+L  + +  ++ 
Sbjct: 163 TDIALAMLVVAYLIMLLPISLVFSWIERRLR 193



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 38/91 (41%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ + ++G +V   R     ++A +   Y+E+ RN P L+ +FFLY  +  +  +
Sbjct: 3   IAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELSRNTPLLIHLFFLYFGLPRIGIV 62

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
               +    G+          +      A  
Sbjct: 63  LSSEVCATLGLVFLGGSYMAESFRSGLEAIS 93


>gi|78184423|ref|YP_376858.1| amino acid ABC transporter permease [Synechococcus sp. CC9902]
 gi|78168717|gb|ABB25814.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. CC9902]
          Length = 300

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 16  MKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG 75
            +     R     VQ+ + + L       +NN+  N+ ++ L L  G+L   AGF + + 
Sbjct: 2   PQMFRQGRFW---VQLCVVVALIAFAGLLINNITVNLIRTGLGLDFGWLWRPAGFALAET 58

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
            +PY    SYA A+ +G++N+  +   G++ AT +G   GA R S N+L+  +   YV +
Sbjct: 59  ALPYAPTDSYAWALTIGWLNSLKVILVGLLLATTLGVAAGAARSSRNRLLRSLSGGYVAL 118

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
            R +P L+ + F Y      LP      ++ F 
Sbjct: 119 IRQVPLLLQLLFWYFVAFLGLPDTPVGGLIHFS 151



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 81/234 (34%), Positives = 116/234 (49%), Gaps = 13/234 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P               +      T+    + K+ +   +L   L 
Sbjct: 35  LIRTGLGLDFGWLWRPAGFALAETALPYAPTDSYAWALTIGWLNSLKVILVGLLLATTLG 94

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF----DKPVLGQFNF- 256
           + A   +R    +  ++L   Y+   LI  +P L+ +   Y + F    D PV G  +F 
Sbjct: 95  VAAGA-ARSSRNRLLRSLSGGYV--ALIRQVPLLLQLLFWYFVAFLGLPDTPVGGLIHFS 151

Query: 257 -----IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                + G  +S EF S+   L  +T A IAEIVR G+ AV RGQ EA  +LGL+     
Sbjct: 152 NQGIRLLGLNLSVEFCSVLTGLVVFTGASIAEIVRGGINAVSRGQWEAFRSLGLSEGLGL 211

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE
Sbjct: 212 RRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 265


>gi|107022813|ref|YP_621140.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686947|ref|YP_840194.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105893002|gb|ABF76167.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652662|gb|ABK13301.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 244

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 83/215 (38%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   SF  G++L + A  L +         L  LY            +L+A     
Sbjct: 28  LTFGVAAASFCTGVLLGI-AGALGKLSRYAAFVWLARLYTMLVRALPELLCLLLAFYAVA 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +  L     + G      F+   ++L     A++ +I R+ L  VP GQ+EAA A G
Sbjct: 87  PAIENALHGSGIVSGDFAFDPFVVAALSLGFIQGAYLTDIFRAALANVPVGQIEAAHAYG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQA 363
           +T  +    + LP A R  +P + + +LN  K++S    +G F DL+         T   
Sbjct: 147 MTPWQTFTRIRLPAAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHY 206

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   L+   ++L LSI        L        ++
Sbjct: 207 VFFYLVTAALFLLLSITSTGIFAALERHANRGTRR 241


>gi|322374751|ref|ZP_08049265.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|321280251|gb|EFX57290.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 219

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 89/212 (41%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    V S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIVLSTLIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSVQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+     L   
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSRILAKH 213



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   ++ +T+IGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIVLSTLIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|15902576|ref|NP_358126.1| amino acid ABC transporter permease [Streptococcus pneumoniae R6]
 gi|116516319|ref|YP_816030.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|182683538|ref|YP_001835285.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|303253932|ref|ZP_07340053.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
 gi|15458107|gb|AAK99336.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae R6]
 gi|116076895|gb|ABJ54615.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae D39]
 gi|182628872|gb|ACB89820.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae CGSP14]
 gi|301801476|emb|CBW34168.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae INV200]
 gi|302599108|gb|EFL66133.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae BS455]
          Length = 219

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKIKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|325970437|ref|YP_004246628.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta sp. Buddy]
 gi|324025675|gb|ADY12434.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 217

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 18/198 (9%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + ++  +     +R + +        L++   L    P +V I   Y +           
Sbjct: 38  ISLIGGILRCSQARIWRKG-------LWLYMSLFQNTPLVVQIFFFYYV----------- 79

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 V   F    + L+ YT AF   +V + ++A+P+ Q EA+++ G ++ +    V+
Sbjct: 80  LPRMGLVLSPFAVGCLGLALYTGAFGIAVVEASILAIPKQQSEASMSQGFSYLQTMVHVV 139

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +PQAM+  +P LT+Q +NL+KNSS+   +   DL+    +  ++T       L+   +YL
Sbjct: 140 IPQAMKIALPSLTNQAVNLIKNSSVLAMIAGGDLMYRSDSWASETAVYGPTFLVTGLLYL 199

Query: 376 SLSIMIALFMNRLNAKIA 393
           S+ + ++  + R+ AK+ 
Sbjct: 200 SICLPLSRLVKRMEAKVR 217


>gi|306833703|ref|ZP_07466830.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304424473|gb|EFM27612.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 230

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 7/207 (3%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              +   +L   L       S+   EK+  +    Y+  F++   P +VLI L +   + 
Sbjct: 24  LWVLVLTILFGSLLGLFLAWSQLSGEKSLPSFARGYV--FILRCTPPIVLIFLVF---YG 78

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P   ++            + + +A++   AA I+E+ +S   A+P+GQ+EA +++GLT 
Sbjct: 79  LPRFLEWWLGIDVNGWSRSVFVILAMTLLFAASISEVFKSSYQALPKGQLEAGLSIGLTD 138

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIE 365
            +    +LLPQA R  +P +T+  +NLLK+ +LA  +G  DL+  G  +I++     ++E
Sbjct: 139 YQTFVRILLPQAFRIALPNITTAIINLLKDIALAYTIGLVDLMGAGNLVISRNLGNYSLE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
                  IY  L++++A+  + +  ++
Sbjct: 199 TYTAVAIIYWVLALILAVGTHFIENEL 225


>gi|163791027|ref|ZP_02185448.1| putative ABC-type amino-acid transporter permease protein
           [Carnobacterium sp. AT7]
 gi|159873672|gb|EDP67755.1| putative ABC-type amino-acid transporter permease protein
           [Carnobacterium sp. AT7]
          Length = 219

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     ++  +  + + S +LG +L L      R++ +K        YI  F        
Sbjct: 18  LDGLRTSLVISLCVIILSILLGTLLGLV-----RNYEKKILGKFASFYIELFR------- 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                         +LG    I GST+    +   +AL  YTAA +AEIVR GL A+P+G
Sbjct: 66  -------NTPLLLWMLGCAFLIPGSTI---LVKGSLALFLYTAAVVAEIVRGGLNAIPKG 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA + G +  +    ++LPQ  + IIP L SQ +  +K++S    +G  +    G  
Sbjct: 116 QFEAAHSQGFSFFQTLLYIILPQTFKKIIPSLLSQVITTIKDTSFLAGLGIMEFTRSGQV 175

Query: 356 I---INQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           I   + +T +   I      +Y  +   +++ + 
Sbjct: 176 ILGKVTKTSEVFLIYGFLAVVYFIICFTLSVLVR 209



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 32/72 (44%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
                  +L G   +  ++   +I + ++GTL+G  R    K++      Y+E+FRN P 
Sbjct: 10  TQPNLLFLLDGLRTSLVISLCVIILSILLGTLLGLVRNYEKKILGKFASFYIELFRNTPL 69

Query: 142 LVVIFFLYKSVL 153
           L+ +      + 
Sbjct: 70  LLWMLGCAFLIP 81


>gi|229589728|ref|YP_002871847.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229361594|emb|CAY48471.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 261

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 91/233 (39%), Gaps = 6/233 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
                  ++  L          A  F  + ++ +V     + L           L +L +
Sbjct: 29  WLLWFTPHSPVLKALMQWSPALAAGFGQNILISLVAIALGSVLGLLVGALALSPLRVLRL 88

Query: 225 ST-FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
                +        + L Y   +  P   + +        P+++ + I L+   +A +AE
Sbjct: 89  PARIWVQIFRNAPWLVLIYFTTYVFPF--EIHVGSAYISFPDWVKVTIGLALPASANVAE 146

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I R  + ++P  Q EAA +L  T  +  R ++LPQ  + ++PP  + Y  +   ++LA  
Sbjct: 147 IFRGAIASIPSTQWEAARSLAFTRGQIFRSIILPQCFKRMLPPWMNLYAVITMGTALASL 206

Query: 344 VGFADLVSVGGTI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           VG  D++         +N TG  + I L  + ++ +    I+    RL  + A
Sbjct: 207 VGVHDVIDTAQIASNTVNMTGFTVVIYLSLLVLFFAYCYPISRLTQRLERRYA 259



 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 43/86 (50%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++ A+  GF     ++   +   +++G LVGA  LS  +++    R++V++FRN P LV
Sbjct: 45  QWSPALAAGFGQNILISLVAIALGSVLGLLVGALALSPLRVLRLPARIWVQIFRNAPWLV 104

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +I+F        + +    I  P  +
Sbjct: 105 LIYFTTYVFPFEIHVGSAYISFPDWV 130


>gi|218682668|ref|ZP_03530269.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli CIAT 894]
          Length = 223

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 86/223 (38%), Gaps = 14/223 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      +        +    ++     VLGI L +      R       K +   
Sbjct: 1   MSYHFEFGWLLQYYPEIIKGILVTLELIAIGGVLGISLGIV-CAWVRALGPAWLKPVVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+           +             +             PE  +  +A+     A+  
Sbjct: 60  YVELIRNTPFLIQLFFIFFGLPSLGLQL-------------PELTAANLAMVINLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I P L+SQ + ++  SS+  
Sbjct: 107 EIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +   DL      I ++T +A E  ++   IYL ++I++   +
Sbjct: 167 QIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVMAILLRQVL 209


>gi|300718267|ref|YP_003743070.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia
           billingiae Eb661]
 gi|299064103|emb|CAX61223.1| polar amino acid ABC transporter, innermembrane subunit [Erwinia
           billingiae Eb661]
          Length = 236

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 2/232 (0%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L +   L+     +    +    ++   S V+ IV+ L A  L   F      AL  
Sbjct: 1   MFGLDYSWLLDPTYQQWLLQGVVQTLELAALSSVIAIVIGL-AGALGLTFKIAWLDALIE 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L++  F     P L ++   + L                 +   F S  ++LS +  A  
Sbjct: 60  LFVELFR-NTPPLLQMLFFYFTLTQIGFTATDPVTGLQVPLVSAFASATVSLSLFGGALC 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  RSG  AVP+  +EAA +LG +       V  P A R  +PPLT+   NL K +S A
Sbjct: 119 IEAFRSGFDAVPKATLEAARSLGYSRWGLFVHVQAPIASRICLPPLTNVLTNLFKTTSQA 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   +L+   G I N T + +E++L+ + IY+ L  ++  F+  +  ++A
Sbjct: 179 SVITVPELMYAAGQIYNDTFRTLEVMLLVLLIYVVLVSLLVWFIGWVERRLA 230



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 3/93 (3%)

Query: 70  FEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWIC 129
           F +D   +    D +Y   +L G V T  LA    + A +IG     G       +  + 
Sbjct: 2   FGLDYSWL---LDPTYQQWLLQGVVQTLELAALSSVIAIVIGLAGALGLTFKIAWLDALI 58

Query: 130 RVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHS 162
            ++VE+FRN PPL+ + F Y ++  +       
Sbjct: 59  ELFVELFRNTPPLLQMLFFYFTLTQIGFTATDP 91


>gi|254250620|ref|ZP_04943939.1| ABC-type arginine/histidine transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124879754|gb|EAY67110.1| ABC-type arginine/histidine transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 440

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 28/207 (13%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
           R S        +  PLL     L +G   +V            P     +      +   
Sbjct: 238 RWSARGWLMLIRGTPLLVQLYLLYYGFGQIV------------PREWMRDSWASPLLRDA 285

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    +ALS   +A++A I+R  +  VP G++EA  A G+T  +  R ++ P+A R  +P
Sbjct: 286 FWYAIVALSVNESAYVATILRGAIAGVPAGEIEAGHAYGMTRLQVLRRIVGPRAWRLALP 345

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL------IWMFIYLSLSI 379
            LT + + LLK++ LA  V   D++     +  +T +  E +       + +     L+I
Sbjct: 346 ALTGEAILLLKSTVLASTVTVFDVMGTANRLRFETLRVYEPLAGAAIVYVVLVA--LLTI 403

Query: 380 MIALFMNRLNA--------KIALKEKK 398
             A    R+N         ++  + ++
Sbjct: 404 PAARLEQRINRYLTRQPDERVPARRRR 430


>gi|172063854|ref|YP_001811505.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
 gi|171996371|gb|ACB67289.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MC40-6]
          Length = 231

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 14/229 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + L  +        +    ++ V S  L   L++    ++R    +       L++
Sbjct: 1   MNDFLSLIEQSGPDVARGIWITLELLVLSCTLAFALAVPL-AVARTSAYRWLSIPSRLFM 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS----PEFMSLYIALSCYTAAF 280
           S F   G P LV I + Y        L QF+ +  S +       F     AL+   AA+
Sbjct: 60  SVF--RGTPLLVQIFVLYY------GLAQFSIVRASPLWLLVGGSFSCALCALTLNLAAY 111

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE +R G+  VP G+ EAA+A G++    T  V++P+A+  + P L ++ +  LK+++L
Sbjct: 112 MAEDIRGGIAGVPVGEKEAALAFGMSRFMLTWFVIVPRAIGIVAPTLGNEIVLQLKSTAL 171

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           A  +   DL  V   I  +T    + +++   +Y+ ++ +++  + R+ 
Sbjct: 172 ASTITVLDLTGVARRISIETY-TTDALMLAGIVYVGITAVLSTALKRVE 219



 Score = 41.1 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 31/77 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L       A  +   +   R SA + ++   R+++ VFR  P LV IF LY  
Sbjct: 18  GIWITLELLVLSCTLAFALAVPLAVARTSAYRWLSIPSRLFMSVFRGTPLLVQIFVLYYG 77

Query: 152 VLSVLPIPDHSIVLPFG 168
           +     +    + L  G
Sbjct: 78  LAQFSIVRASPLWLLVG 94


>gi|163857806|ref|YP_001632104.1| amino acid ABC transporter, permease protein [Bordetella petrii DSM
           12804]
 gi|163261534|emb|CAP43836.1| amino acid ABC transporter, permease protein [Bordetella petrii]
          Length = 230

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 5/200 (2%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
              GI L+            +  +  P+   +   I  +    L+   Y +++  P    
Sbjct: 29  LAAGISLACSVALGVPLALARMARRAPIWRPAAGYIQFIRATPLLVQIYLVYYALPY--- 85

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
             F+  +    E +   +AL+ +  A+++EIVR G+ +VPRGQ+E A A+G+  R+  R 
Sbjct: 86  --FVPAAKSWSELILGIVALTLHHTAYMSEIVRVGIQSVPRGQIEGAKAVGMDFRQRLRY 143

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+LPQA  + +PPL  Q   L+K++SL   +   +LV+ G  + ++     E  L     
Sbjct: 144 VVLPQAFANTLPPLLGQTAVLIKDTSLLSLIAVFELVAAGVLMNSERIVPNESFLTIAAG 203

Query: 374 YLSLSIMIALFMNRLNAKIA 393
           YL +   +      +   +A
Sbjct: 204 YLLIYACMLGLSRLVGLWLA 223



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 33/86 (38%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            YA     G  NT   A   +  +  +G  +   R++    +      Y++  R  P LV
Sbjct: 15  QYAGQFADGLANTLLAAGISLACSVALGVPLALARMARRAPIWRPAAGYIQFIRATPLLV 74

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
            I+ +Y ++   +P       L  G+
Sbjct: 75  QIYLVYYALPYFVPAAKSWSELILGI 100


>gi|299541860|ref|ZP_07052183.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725598|gb|EFI66239.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 235

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 104/237 (43%), Gaps = 9/237 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        +      +     +   S +LG +  L     ++    K       L
Sbjct: 1   MDKYFDATYIWNAIPVLLPFLKITFLVAGSSIILGTLFGLLLAA-AKLSSVKWLTKFANL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y  T ++   P++VL+ L Y   +  P L +   +   ++    + + +  +   AA ++
Sbjct: 60  Y--TTIMRCTPSIVLLFLVY---YGVPALAENVGLNLHSIETA-IFVVVTFTLQFAAIMS 113

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++RS  +A+P+GQ EAA+++GLT  +A R ++ PQA+   +P   +  + LL+  +LA 
Sbjct: 114 EVIRSAYLAIPKGQFEAAVSVGLTPFQAYRRIIFPQALVVALPNFGNGMIALLQEGALAY 173

Query: 343 AVGFADLVSVGGTIINQ--TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +G  D+V     II       A+EI +    IY  LSI+I      L       +K
Sbjct: 174 TIGLIDIVGKANLIIASNINAHALEIYIALAIIYWVLSIIIEKIFTILEKVFGKGKK 230


>gi|283956262|ref|ZP_06373742.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791982|gb|EFC30771.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 1336]
          Length = 219

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + + F    +    KI + + ++ IV   F   +++++ ++  K L   YI  F   
Sbjct: 5   FNAQNIEFLMQGLFLTLKIALATCIISIVFGTFL-AITKNYGDRLSKFLAACYIDIFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                 L+       F  PV             P+     I  S YT++ +AEI+R GL 
Sbjct: 64  P-----LLLWMLAACFVLPVFFG--------QFPQAFWGTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L 
Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 170

Query: 351 SVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIA 393
               TI+ +     EI+    +   IY  +   +++ +     K A
Sbjct: 171 YNSKTILAKLRSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTA 216



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 5/192 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +A +  I + + GT +   +   ++L  ++   Y+++FRN P L+ +   
Sbjct: 13  LMQGLFLTLKIALATCIISIVFGTFLAITKNYGDRLSKFLAACYIDIFRNTPLLLWMLAA 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVLGIVLSLF 203
              +         +     G  L    +    +    N+         +S   G   +LF
Sbjct: 73  CFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLF 132

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L + F +     L  +  +      L  L +  L Y        L  F  I      
Sbjct: 133 YIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILAKLRSFEEILAMIGV 192

Query: 264 PEFMSLYIALSC 275
              +   I  S 
Sbjct: 193 VAGIYFIICFSL 204


>gi|167842410|ref|ZP_02469094.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia thailandensis MSMB43]
          Length = 243

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   SF  G++L + A  L +         L  LY +          +L+A     
Sbjct: 28  LTFGVAAASFCAGVLLGI-AGALGKLSRHAPLAWLARLYTTLVRALPELLCLLLAFYAVA 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +  L     +        F+   ++L     A++ +I R+ L+ VP GQ+EAA A G
Sbjct: 87  PAVEHALRDSGIVSDGFAFDPFVVAALSLGFIQGAYLTDIFRAALVNVPAGQVEAAHAYG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQA 363
           +T  +    + LP A R  +P + + +LN  K++S    +G F DL+         T   
Sbjct: 147 MTPWQTLTRIRLPAAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHY 206

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   L+   ++L LSI        L    +   ++
Sbjct: 207 VFFYLVTAALFLLLSIASTGIFAALERHASRGTRR 241


>gi|163748060|ref|ZP_02155379.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45]
 gi|161378666|gb|EDQ03116.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Oceanibulbus indolifex HEL-45]
          Length = 164

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 1/164 (0%)

Query: 229 IFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + GLP LVLI L +         +G    + G     +F +    +     A+  E  R 
Sbjct: 1   MRGLPDLVLILLVFFGGQVTLNNIGAMTGLWGYVEVSQFAAGAGTIGVIFGAYFTETFRG 60

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            ++A+PRGQ+EA ++ G+      R ++ PQ +R  +P  T+ +L  LK ++L   +G  
Sbjct: 61  AIMAIPRGQIEAGLSCGMHKSLIFRHIIGPQMIRFGLPGFTNNWLVQLKTTALVSVIGLQ 120

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           DLV    T    TGQ    +     IYL L+ +  L    +  +
Sbjct: 121 DLVYNAFTAWRSTGQLFTFMAAAFAIYLLLTGVSDLLFRAVERR 164


>gi|227818594|ref|YP_002822565.1| ArtM, ABC-type arginine/histidine transport system, permease
           component ArtM [Sinorhizobium fredii NGR234]
 gi|36958849|gb|AAQ87274.1| Transporter [Sinorhizobium fredii NGR234]
 gi|227337593|gb|ACP21812.1| putative ArtM, ABC-type arginine/histidine transport system,
           permease component ArtM [Sinorhizobium fredii NGR234]
          Length = 229

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 5/228 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                             + V S   G +L++    L++    +  K     Y +   + 
Sbjct: 5   WIFSYWPLLAAGAVQTVLLLVISVGCGFILAIGL-ALAQVVGPRWLKLFARGYCT--CLR 61

Query: 231 GLPTLVLI-ALKYQLHFDKPVLGQFNF-IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           G P L+ +  L Y +    P++           +   F    ++ +   AA+ AE++R  
Sbjct: 62  GTPLLIQLWLLYYGVGSLLPMIPGLRASFLWPILREGFFFAAVSFTLNYAAYEAEVLRGA 121

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L+AVP+G++EA  + G++     R + LP+A+R  +P +  + +  LK + LA  V   D
Sbjct: 122 LLAVPKGELEAGRSFGMSSSTLFRRIWLPRAIRIALPTIAGEVVLQLKATPLAFTVTVMD 181

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L +V   +   T    E +++    Y+ L+++I      + A++ ++ 
Sbjct: 182 LYAVAYKVRQDTLLVYEPLMVVTVFYVCLTLIITRAFKIVEAQVPVRR 229


>gi|257056748|ref|YP_003134580.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256586620|gb|ACU97753.1| amino acid ABC transporter membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 215

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 13/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L           K+FVFS +  +VL      L R       +A    Y++ F    L  
Sbjct: 7   NLDLYGPGFLNTIKLFVFSAIGSLVLGTILAML-RVSPVPILRAAGAAYVTLFRNTPLTL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L    +      D   L              F +  +AL+ YTAAF+ E+VRSG+  VP 
Sbjct: 66  LFFFFVFAFPLLDVVEL------------SYFWAAVVALTMYTAAFVCEVVRSGINTVPV 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A+GLT  +    ++LPQA RS++PP+ S  + LLKN+++A      +  ++  
Sbjct: 114 GQAEAARAIGLTFGQTLSHIVLPQATRSVVPPMVSTMIALLKNTTIAAGFSVVEAGAIQN 173

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  +    +  +L     ++ L   + L    L  + ++  
Sbjct: 174 YLSERGYSVLVGLLWVALGFVILITPMTLLQRSLEKRWSVAR 215



 Score = 43.0 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
            GF+NT  L     I + ++GT++   R+S   ++      YV +FRN P
Sbjct: 13  PGFLNTIKLFVFSAIGSLVLGTILAMLRVSPVPILRAAGAAYVTLFRNTP 62


>gi|307329226|ref|ZP_07608391.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306885125|gb|EFN16146.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 215

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 17/200 (8%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIV++ F     R       +A    +++      L  L LIA          V+ Q  F
Sbjct: 33  GIVIAGF-----RVSPIPPLRAFGTAWVTLLRNTPLTLLFLIAFF--------VIPQIFF 79

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G S     F+    AL CYT++F+ E VRSG+ AVP GQ EAA +LG+T  +  RL++ 
Sbjct: 80  PGTS----PFVLAMGALGCYTSSFVCEAVRSGINAVPLGQAEAARSLGMTFFQTLRLIVF 135

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA RS+IPP++S ++ L KNS++A A    +L +V   + ++      I L     YL 
Sbjct: 136 PQATRSVIPPMSSIFIALTKNSAIAGAFSNTELFNVSKLLSDKGFAIGWIFLWIALCYLV 195

Query: 377 LSIMIALFMNRLNAKIALKE 396
           ++  I+     L +++ +  
Sbjct: 196 ITFAISGLFRLLESRLEVAR 215



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 31/84 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +      GF+ T  +  +    A ++G ++   R+S    +      +V + RN P  ++
Sbjct: 7   HLPQFREGFLGTLSITAASAALALVLGIVIAGFRVSPIPPLRAFGTAWVTLLRNTPLTLL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFG 168
               +  +  +        VL  G
Sbjct: 67  FLIAFFVIPQIFFPGTSPFVLAMG 90


>gi|298485184|ref|ZP_07003278.1| amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298160296|gb|EFI01323.1| amino acid ABC transporter, permease protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 221

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 98/226 (43%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + +           ++     +LG+ L +    + R +  +    +  +Y+  
Sbjct: 5   FDFTPVLQNIDVLLRGALFTLELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE- 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI   P LV +   +           F          E+ +  +A+     A+  EIVR
Sbjct: 63  -LIRNTPFLVQLFFIF-----------FGLPSLGVQITEWQAAVLAMVINLGAYSTEIVR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALSKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L      I ++  ++ E  ++   IYL+++++I   +  +  + 
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLIRQLLAWIGRRY 216



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQNIDVLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQITEWQAAVLAMVINLGAYSTEIVRAGIQAI 116


>gi|157362893|ref|YP_001469660.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
 gi|157313497|gb|ABV32596.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermotoga lettingae TMO]
          Length = 224

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 14/213 (6%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           N  +  F  ++GI    F   L R++            I          LV     Y ++
Sbjct: 20  NLVLLPFVLIMGIFFG-FIIALIRYYKIPVLSQFFAFAIEIVRGSPFLLLV-----YAVY 73

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P                F +  + L+  +  +++E+ RSGL+A+ +GQ EAA ALG+
Sbjct: 74  FVLPYF--------GIELQSFETAVVVLTITSTVYLSEVFRSGLLAIDKGQFEAADALGM 125

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           +      L++LPQ ++  +P +  Q +  +K++S+   +G A++V     ++  T     
Sbjct: 126 SFANKLFLIILPQVLQITLPSIVGQIVLTIKDTSIVSLIGMAEIVRTSRQVMQITLDPFT 185

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             LI    + ++   + L   +L  +I    KK
Sbjct: 186 AFLIVAGYFAAVCYPLILVSRKLEQRILKGGKK 218


>gi|157165596|ref|YP_001466616.1| 6,7-dimethyl-8-ribityllumazine synthase [Campylobacter concisus
           13826]
 gi|112800728|gb|EAT98072.1| ABC-type amino acid transport system, permease component
           [Campylobacter concisus 13826]
          Length = 217

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 14/209 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I     V  I++ +F   + + +  K    L   Y+   L    P L+ +   + L
Sbjct: 19  LTIEIAFLGIVFSILIGIFCMAV-KFYKLKFLSKLVDCYVE--LSRNTPLLIQL---FFL 72

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  P L              F      LS    ++++E  R G  AV + Q+EA +++ 
Sbjct: 73  YYGLPKL--------GVSMSGFTCAVAGLSFLGGSYMSESFRLGFEAVRKSQIEAGLSIA 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  R V+LPQA    +P +++  + LLK +S+   V  ADLV V   +I    +  
Sbjct: 125 LSKNQLLRYVILPQAFSVALPSISANVIFLLKETSIVSIVALADLVYVAKDLIGLYYKTD 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E + + +  YL + + ++L ++ +  ++ 
Sbjct: 185 EALFMLVISYLVIILPVSLALSYVEKRVR 213



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 38/79 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     +    +   V T  +AF G++ + +IG    A +    K ++ +   YVE+ 
Sbjct: 1   MDFEFIEKFYPLFVKAGVLTIEIAFLGIVFSILIGIFCMAVKFYKLKFLSKLVDCYVELS 60

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P L+ +FFLY  +  +
Sbjct: 61  RNTPLLIQLFFLYYGLPKL 79


>gi|266625008|ref|ZP_06117943.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288863103|gb|EFC95401.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 219

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 85/222 (38%), Gaps = 12/222 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF-HEKTGKALPLLYISTFLI 229
           +N   +          A + V    +GI  ++    L     + K      ++ +   + 
Sbjct: 1   MNWEIIGKYLPLYQKAAVLTVKIGFMGIAAAIMIGLLCTIIQYYKIPVIRRIVSVYIEIS 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P +V +   Y                    +         L+    ++++E  RSG+
Sbjct: 61  RNTPLMVQLFFIYY-----------GLPKIGIQTDAAACGVAGLAFLGGSYMSEAFRSGI 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AV   Q E+A +LGL+  +    V+LPQA    +P   +  + LLK +S+  A+   DL
Sbjct: 110 EAVAPIQEESAYSLGLSKLQTFSYVILPQAFSISVPAFMANVIFLLKETSVFSAISLMDL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +     +I    +  E + + +  YL + + +++  + L  +
Sbjct: 170 MFTAKDLIGLYYKTAESLFLLVVFYLIILLPVSVLGSLLERR 211



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y        V T  + F G+  A +IG L    +     ++  I  VY+E+ RN P +V 
Sbjct: 9   YLPLYQKAAVLTVKIGFMGIAAAIMIGLLCTIIQYYKIPVIRRIVSVYIEISRNTPLMVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +FF+Y  +  +    D +     G+                 A   +
Sbjct: 69  LFFIYYGLPKIGIQTDAAACGVAGLAFLGGSYMSEAFRSGIEAVAPI 115


>gi|266625007|ref|ZP_06117942.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
 gi|288863102|gb|EFC95400.1| amino acid ABC transporter, permease protein [Clostridium hathewayi
           DSM 13479]
          Length = 224

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 22/210 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 S  LGI+L +        +     +A+   Y+    I        + L + ++F
Sbjct: 30  MISVAISIPLGIILGILM-----TWKNPICRAILRCYLEFVRIMP-----QMVLLFLVYF 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  ++  G        ++  I  + + AA ++++VR  LI++P  Q E+A ALGL+
Sbjct: 80  GTTRAFGWDLSGE-------LASVIVFTVWGAAEMSDLVRGSLISIPIHQYESAEALGLS 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----G 361
             ++ + ++LPQA+R +IP   +    ++K +SL + +G  +++ V   II         
Sbjct: 133 RIQSYQYIVLPQAVRRLIPLSINLITRMIKTTSLILMIGVVEVLKVAQQIIEANRMGSPN 192

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            A  I L   F+Y      I+L    L  +
Sbjct: 193 AAFGIYLTVFFLYFIACWPISLLAKYLEKR 222


>gi|226196378|ref|ZP_03791960.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
 gi|225931595|gb|EEH27600.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei Pakistan 9]
          Length = 231

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 4/208 (1%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKTGKALPLLYIST 226
           M+L    L    L++       +  F L I       + R +   +    +  PL+    
Sbjct: 1   MWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQLL 60

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F  FG+  L+       L  + P       +     S EF++ ++ LS YT+AF+AE  +
Sbjct: 61  FWYFGVAALLPEPAMAWL--NAPHALDVGGLALRWPSFEFVAGWLGLSGYTSAFVAEEFQ 118

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL  VP GQ  AA ALGL+  +A R V+LPQA+R  +PPL  QY+NL+KNSSL +A+G 
Sbjct: 119 AGLRGVPAGQHHAASALGLSPLQAFRFVVLPQAVRIALPPLFGQYMNLIKNSSLTMAIGV 178

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIY 374
           A+L      +  +T +      +   +Y
Sbjct: 179 AELSYASRQVETETFRTFAAFGVSTVLY 206



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 34/77 (44%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +  GF+ T  L+ +  + AT+ G  +   R +           YV  FRN P +V + 
Sbjct: 1   MWLWQGFLLTLGLSLAAAVTATLAGFALAIARHAKRASPRRAAAAYVVAFRNTPLVVQLL 60

Query: 147 FLYKSVLSVLPIPDHSI 163
           F Y  V ++LP P  + 
Sbjct: 61  FWYFGVAALLPEPAMAW 77


>gi|169832815|ref|YP_001694169.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168995317|gb|ACA35929.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 206

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 18/209 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y
Sbjct: 1   MHIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY 53

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F       V    +   + L     +++AE  RSGL A+ + Q E  +A
Sbjct: 54  -----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLA 102

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +  R V+LPQA   ++P  ++  + L+K +S+  AV  ADL+ V   +I    +
Sbjct: 103 IGLTPLQVFRYVVLPQATAVVLPSFSANVIFLIKKTSVFSAVALADLMYVAKDLIGLYYE 162

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + + +  YL + + I+L  + +  +
Sbjct: 163 TDIALAMLVVAYLIMLLPISLVFSWIERR 191



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 38/91 (41%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ + ++G +V   R     ++A +   Y+E+ RN P L+ +FFLY  +  +  +
Sbjct: 3   IAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV 62

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
               +    G+          +      A  
Sbjct: 63  LSSEVCATLGLVFLGGSYMAESFRSGLEAIS 93


>gi|148985284|ref|ZP_01818507.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147922482|gb|EDK73601.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP3-BS71]
          Length = 226

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIHLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRLR 213



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIHLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|296272603|ref|YP_003655234.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296096777|gb|ADG92727.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 226

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 11/165 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I   P +V +   +           F             +  IA+     A+  EI+R+
Sbjct: 63  VIRNTPFIVQLFFIF-----------FGLPAIGFKLTAMEAGIIAMVVNLGAYSTEIIRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ A  +GQ EA   +GL   +    ++LPQA   I P L SQ + ++  SS+   +   
Sbjct: 112 GVEATGKGQWEAGKTMGLKWSQIFIHIILPQAFHKISPALVSQCVIVMLGSSVLSQISVE 171

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +L      I ++T  + E   I   IYL  +I++   +  ++ K+
Sbjct: 172 ELTFSANFIQSRTFLSFESYFIVTAIYLVFAIILRFILTLISEKL 216


>gi|197295286|ref|YP_002153827.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944765|emb|CAR57370.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 255

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             S +LG+ L+L A       R S        +  PLL     L +G   +V        
Sbjct: 32  AASVLLGVPLALAAGARHAPLRWSARGWLMLIRGTPLLVQLYLLYYGFGQIV-------- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P     +      +   F    +ALS   +A++A I+R  +  VP G++EA  A G
Sbjct: 84  ----PREWMRDSWASPLLRDAFWYAIVALSVNESAYVATILRGAIAGVPAGEIEAGHAYG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++ P+A R  +P LT + + LLK++ LA  V   D++    T+  +T +  
Sbjct: 140 MTRMQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVMGTANTLRFETLRVY 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E +     +Y+ L  ++ +   R+  +I   
Sbjct: 200 EPLAGAAIVYVVLVALLTIPAARVEQRINRY 230


>gi|85707347|ref|ZP_01038430.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. 217]
 gi|85668155|gb|EAQ23033.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. 217]
          Length = 217

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 90/228 (39%), Gaps = 13/228 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L+   L F          +   S V+G +L +    +              L   
Sbjct: 1   MFDTALSANDLVFLAKGAGITILVTAISVVIGTLLGILFGVIRVQLGPVLA---APLTFF 57

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +   +P L+ + L             F  +        F    I LS YT+A+ AEIV
Sbjct: 58  LDIFRSVPLLIQLVLG----------NAFVGMVLQLQISGFTVACIVLSLYTSAYCAEIV 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVP     AA +LGLT  +  R ++LP A R  +P      L ++K+S+L   V 
Sbjct: 108 RGGIDAVPEITRRAARSLGLTWGQDMRYIVLPLATRVALPSWIGLALGVMKDSALVYVVQ 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L+     +I +  + + ++LI    Y  +S  +A F   L  + +
Sbjct: 168 VTELLKSTQILITRLQEPLFLLLICGAFYFIISFPLARFGGYLEKRWS 215


>gi|293392695|ref|ZP_06637014.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           subunit [Serratia odorifera DSM 4582]
 gi|291424812|gb|EFE98022.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           subunit [Serratia odorifera DSM 4582]
          Length = 221

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 14/197 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  ++   + ++G+ L +    +       T +   L      L+   P +V +   + +
Sbjct: 23  TTIELTALATLMGVSLGIVGAAIRSGRPSLTSRIWGL---YVELVRNTPFVVQL---FFI 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P LG     G         +  +A+     A+  EI+R+G+   P+GQ EA   LG
Sbjct: 77  VFGLPSLGWKLTAGQ--------AALLAMVINLGAYSTEIIRAGIQVTPKGQWEAGRVLG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +  +    ++LP +++ I P L SQ + ++  SS+   V F +L      I ++T  + 
Sbjct: 129 FSRSQTFLRIVLPPSLQRIYPALVSQCIIVMLGSSVVSQVSFEELTFAANLIQSRTFLSF 188

Query: 365 EIILIWMFIYLSLSIMI 381
           E+ L+    YL LS+++
Sbjct: 189 EVYLVTTLFYLLLSVLM 205



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   +   +L G + T  L     +    +G +  A R     L + I  +YVE+ 
Sbjct: 5   LNFPALWPFMPELLAGLLTTIELTALATLMGVSLGIVGAAIRSGRPSLTSRIWGLYVELV 64

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P +V +FF+   + S+
Sbjct: 65  RNTPFVVQLFFIVFGLPSL 83


>gi|291460391|ref|ZP_06599781.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291416958|gb|EFE90677.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 208

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 16/215 (7%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSR---HFHEKTGKALPLLYISTFLIFGLPTLVLI 238
                A++ +    LGI+ S+    L     ++     + +   Y+   L    P LV +
Sbjct: 1   MYFDAARLTLGIAALGILFSVLIGALCSVTEYYKLPILRRIASAYVE--LSRNTPLLVQL 58

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              + L+F  P L               +   + LS    A++ E  R+GL AV   Q E
Sbjct: 59  ---FFLYFGLPKL--------GIRMSSALCGVVGLSFLGGAYMTESFRAGLEAVEGVQRE 107

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA++LGLT  ++   V+ PQA+   +P L +  + L+K +S+  A+  ADL+ V   +I 
Sbjct: 108 AALSLGLTPLQSMGYVIFPQALALSVPSLVANVIFLIKETSVFSAIALADLMYVAKDLIG 167

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              Q  E + + +  YL L + I++    L  ++ 
Sbjct: 168 LYYQTEEALFMLVLSYLVLLLPISILGTLLERRLR 202



 Score = 43.0 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A  G++ + +IG L          ++  I   YVE+ RN P LV +FFLY  +  +
Sbjct: 9   TLGIAALGILFSVLIGALCSVTEYYKLPILRRIASAYVELSRNTPLLVQLFFLYFGLPKL 68

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                 ++    G+          +      A
Sbjct: 69  GIRMSSALCGVVGLSFLGGAYMTESFRAGLEA 100


>gi|257067918|ref|YP_003154173.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
 gi|256558736|gb|ACU84583.1| amino acid ABC transporter membrane protein [Brachybacterium
           faecium DSM 4810]
          Length = 257

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 7/227 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
               +  N + L   +  +     +   + VLG +L+L  + +           + +L  
Sbjct: 7   FFESLGPNFQILLERSPQVLDGVWVTALATVLGALLALAISFVLGLLQIAPIFIVRILAR 66

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
                F   +LV+     QL +   VL Q  +  G  + P  +   +AL     A+ AE+
Sbjct: 67  VFVEFFRGTSLVV-----QLFWLAFVLPQLPYPLGFQLDPLLI-GVLALGLNYGAYGAEV 120

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  + +VP+GQ EA  AL L+  +    +++PQA   +IP L++ ++ LLK S++  ++
Sbjct: 121 VRGSIGSVPKGQYEAISALSLSPARGMFRIVIPQAWALMIPSLSNLWIQLLKGSAIVGSI 180

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              DL      + ++TG      L  +  Y  ++ +I + MN L  +
Sbjct: 181 TLYDLFFQVEQVRDRTGTWF-AYLFALVAYYLIAWVIVIVMNGLEIR 226



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T      G + A  I  ++G  +++   +V  + RV+VE FR    +V +F+L 
Sbjct: 26  LDGVWVTALATVLGALLALAISFVLGLLQIAPIFIVRILARVFVEFFRGTSLVVQLFWLA 85

Query: 150 KSVLSVL 156
             +  + 
Sbjct: 86  FVLPQLP 92


>gi|320531679|ref|ZP_08032619.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136099|gb|EFW28107.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 218

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 8/185 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G   PL  +    +     +  + L   +    P +            P F S+ +AL
Sbjct: 40  RVGPIPPLRALGAAWVTVACNIPNLCLMVLIGLALPHV--------GITIPLFWSVVVAL 91

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              ++ F+ E VRSG+ +VP+GQ+EAA ALG+      R ++LPQA+   I PL + ++ 
Sbjct: 92  IFSSSGFVCETVRSGINSVPKGQIEAARALGMPFGLIIRGIVLPQALARTIQPLVNIFIA 151

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            L  SSLA A+G  +L +V   I       +   L     YL+++         L  ++ 
Sbjct: 152 CLIGSSLAAAIGVVELTAVTQKINQDRAAGVITFLTSGLTYLAIAFAATKLGGLLERRLE 211

Query: 394 LKEKK 398
              K+
Sbjct: 212 FMGKE 216


>gi|78066233|ref|YP_369002.1| ABC polar amino acid transporter, inner membrane subunit
           [Burkholderia sp. 383]
 gi|77966978|gb|ABB08358.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia sp. 383]
          Length = 240

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)

Query: 197 GIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           G++L++         R     +    +  PLL    F  FG+ +L+       L+    +
Sbjct: 34  GLLLAVMRHARGTAPRAVAAAYVVAFRNTPLLVQLLFWYFGVASLLPDTWIAWLNARHAL 93

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +   +   EF++ ++ LS YTAAF+AE   +GL  V R Q +AA ALGLT  ++
Sbjct: 94  SIGPFTLAWPSF--EFVAGWVGLSAYTAAFVAEECEAGLRGVRRAQHDAAAALGLTPMQS 151

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQA+R  +PPL  QY+NL+KNSSLA+A+G A+L      +  +T +      + 
Sbjct: 152 LRYVVLPQAVRIALPPLFGQYMNLVKNSSLAMAIGVAELSYASRQVETETFKTFAAFGVA 211

Query: 371 MFIYL 375
             +Y+
Sbjct: 212 TVLYV 216



 Score = 40.3 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 55/158 (34%), Gaps = 2/158 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GFV T  LA +  + AT  G L+   R +       +   YV  FRN P LV 
Sbjct: 8   YLSWLWQGFVLTLGLAAASAVVATAGGLLLAVMRHARGTAPRAVAAAYVVAFRNTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL--SL 202
           + F Y  V S+LP    + +                        + + ++    V     
Sbjct: 68  LLFWYFGVASLLPDTWIAWLNARHALSIGPFTLAWPSFEFVAGWVGLSAYTAAFVAEECE 127

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              R  R        AL L  + +     LP  V IAL
Sbjct: 128 AGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165


>gi|218458226|ref|ZP_03498317.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Kim 5]
          Length = 202

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 13/171 (7%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +R       +AL + ++   ++   P LV I   Y   F  P++       G  ++P  +
Sbjct: 45  ARTSKIPLVRALVIGFVE--VVRNTPFLVQIFFIY---FALPLM-------GIRLNPT-V 91

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
           +  IAL     A+  EI+R G+ ++ +GQ+EA  ALGL      RL++L  A+R+I P L
Sbjct: 92  TAIIALGINGGAYAIEIIRGGVESISKGQIEAGFALGLHKGDVFRLIVLKPALRAIYPSL 151

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           TSQ++ L   +S+  ++   +L S    I + T ++ E+      IYL +S
Sbjct: 152 TSQFVMLTLTTSVCTSIAAYELTSAAQRIESDTFRSFEVYFTVTAIYLVIS 202



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/84 (34%), Positives = 45/84 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  LA +GM+ A +IG L  A R S   LV  +   +VEV RN P LV IFF+
Sbjct: 17  LLWGSLGTMGLALAGMLLALLIGVLGVAARTSKIPLVRALVIGFVEVVRNTPFLVQIFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y ++  +    + ++     + +N
Sbjct: 77  YFALPLMGIRLNPTVTAIIALGIN 100


>gi|145297727|ref|YP_001140568.1| ABC-type arginine transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142850499|gb|ABO88820.1| ABC-type arginine transporter, permease protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 216

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 10/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            LS           + + S V G+VL+L  +             +  L   T LI GLP 
Sbjct: 1   MLSLLLDAAWMTLGLVLASLVGGMVLALGLSAAELSKQPWLVWPVATL---TTLIRGLPE 57

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+++   Y           F   G       F    +ALS   A++  + +R+ L AVP 
Sbjct: 58  LLVVLFIYFGSTQV----LFLITGEYVEFSPFACGVLALSLLFASYATQTLRAALNAVPA 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ  AA+ALGL        ++LPQA R  +P L +Q+L LLK+++L   +G  +++    
Sbjct: 114 GQRLAALALGLGKGHIFFRIVLPQAWRHALPGLGNQWLVLLKDTALVSLIGVNEMMRQAQ 173

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMN---RLNAKIA 393
                T +          IYL++S++    +    R   +  
Sbjct: 174 MASASTYEPFTWYAAAALIYLAISLVSEFGLKQAARYTRRYG 215


>gi|72161212|ref|YP_288869.1| amino acid ABC transporter permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thermobifida fusca YX]
 gi|71914944|gb|AAZ54846.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Thermobifida fusca YX]
          Length = 224

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 14/224 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +   + T+       +FSF+LG++L+       R       + +  +Y+ T     L TL
Sbjct: 12  IDGFSWTVRLALFSALFSFILGVILTAM-----RVSPIGLLRGVSTVYVETVRNSPL-TL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+     L+    +      +  S     F    I LS YTA F++E +RSG+  +P G
Sbjct: 66  VLLFCGLGLNSALGL-----SLADSVAWDVFWWAVIGLSAYTACFVSETLRSGINTIPVG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA--VGFADLVSVG 353
           Q EAA +LGLT  +  RL+++PQA+R++I PL S  + L+KN+++A    +G  +     
Sbjct: 121 QAEAARSLGLTFTQILRLIIIPQALRTVIGPLGSVLIALIKNTTVASVAGLGVQEASRQM 180

Query: 354 GTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             + +Q     +   + +   +L L++ +  F + L+ ++A+  
Sbjct: 181 KLMFDQGIAPVLPTFVGFAIGFLVLTLPVGYFFSWLSKRMAVVR 224



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 39/87 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + GF  T  LA    + + I+G ++ A R+S   L+  +  VYVE  RN P  +V+ F  
Sbjct: 12  IDGFSWTVRLALFSALFSFILGVILTAMRVSPIGLLRGVSTVYVETVRNSPLTLVLLFCG 71

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGL 176
             + S L +     V     +    GL
Sbjct: 72  LGLNSALGLSLADSVAWDVFWWAVIGL 98


>gi|227530661|ref|ZP_03960710.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus vaginalis ATCC 49540]
 gi|227349442|gb|EEJ39733.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus vaginalis ATCC 49540]
          Length = 225

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 18/229 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +       +     + T+  I V S  +G++L      L R    +  + + LLY+  F
Sbjct: 7   SVLFEGTNFARLMGGLWTSVWIAVVSLAIGLLLGTIFGLL-RTLPSRIIRFILLLYLEFF 65

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I  +PT+VL+ L Y +     +  QFN        P      +A S + AA  ++IVR 
Sbjct: 66  RI--VPTVVLLFLVYYI-----LPRQFN-----VNLPATWMAVLAFSLWVAAEFSDIVRG 113

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L +VP+ Q E+ +ALGL   +  R VLLPQA++  +P   +    ++K +SL + +   
Sbjct: 114 ALESVPKHQRESGLALGLNQWQLFRYVLLPQAIQLELPATINLATRVIKTTSLLLMISVM 173

Query: 348 DLVSVGGTIINQTGQA-----IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D+++VG  II    Q        +  +   +Y  +   ++L+   L AK
Sbjct: 174 DVINVGQQIIEANNQTHPTGIFWVYGLIFILYFIVDYPLSLWAKHLTAK 222



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +    ++GT+ G  R   ++++ +I  +Y+E FR +P +V++F +
Sbjct: 18  LMGGLWTSVWIAVVSLAIGLLLGTIFGLLRTLPSRIIRFILLLYLEFFRIVPTVVLLFLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   +  +    F   
Sbjct: 78  YYILPRQFNVNLPATWMAVLAFSLW 102


>gi|227522632|ref|ZP_03952681.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
 gi|227090212|gb|EEI25524.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus hilgardii ATCC 8290]
          Length = 204

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 19/220 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              +         +  +   SF+  ++L LF T L++    K        +IS   + G+
Sbjct: 3   FHSIPKILAGFPMSLYLTAISFIGALILGLFLT-LAQMSRFKLLHWSARAFISF--MRGV 59

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LVL+ + Y                         +  IA +   +AF++E+ RS   AV
Sbjct: 60  PMLVLLFIIYFGFGAN----------------ALPAAVIAFTINCSAFVSEVFRSSFSAV 103

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            RGQ EAA +LGL +R     V+ PQA R  IP L +  L+L K++SLA  +  +++   
Sbjct: 104 DRGQWEAAYSLGLPYRTVIAKVIFPQAFRIAIPALGNILLDLFKSTSLAAMITVSEMFMD 163

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I       + I ++   IY     ++ +   +L   +
Sbjct: 164 AKIIAGAYQDYMSIYIVMAIIYWFFCWLMTVGQTQLEHAL 203



 Score = 39.5 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 33/64 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL GF  + +L     I A I+G  +   ++S  KL+ W  R ++   R +P LV++F +
Sbjct: 9   ILAGFPMSLYLTAISFIGALILGLFLTLAQMSRFKLLHWSARAFISFMRGVPMLVLLFII 68

Query: 149 YKSV 152
           Y   
Sbjct: 69  YFGF 72


>gi|57237747|ref|YP_178995.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni RM1221]
 gi|86150632|ref|ZP_01068854.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151103|ref|ZP_01069319.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86152473|ref|ZP_01070678.1| amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|88596150|ref|ZP_01099387.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613743|ref|YP_001000593.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157415176|ref|YP_001482432.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|167005524|ref|ZP_02271282.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|205356402|ref|ZP_03223167.1| putative ABC type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|218562538|ref|YP_002344317.1| putative ABC-type amino-acid transporter permease [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|315124412|ref|YP_004066416.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|57166551|gb|AAW35330.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni RM1221]
 gi|85838893|gb|EAQ56160.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85842273|gb|EAQ59519.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85843358|gb|EAQ60568.1| amino acid ABC transporter, permease protein [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|87248909|gb|EAQ71872.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190991|gb|EAQ94963.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112360244|emb|CAL35039.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|157386140|gb|ABV52455.1| putative polar amino acid transport system permease protein
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|205345787|gb|EDZ32425.1| putative ABC type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|284926152|gb|ADC28504.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315018134|gb|ADT66227.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315058358|gb|ADT72687.1| Putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni S3]
 gi|315927531|gb|EFV06864.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315932600|gb|EFV11531.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 219

 Score =  111 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + + F    +    KI + + ++ IV   F   +++++ ++  K L   YI  F   
Sbjct: 5   FNAQNIEFLMQGLFLTLKIALATCIISIVFGTFL-AITKNYGDRLSKFLAACYIDIFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                 L+       F  PV             P+     I  S YT++ +AEI+R GL 
Sbjct: 64  P-----LLLWMLAACFVLPVFFG--------QFPQAFWGTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L 
Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 170

Query: 351 SVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIA 393
               TI+ +     EI+    +   IY  +   +++ +     K A
Sbjct: 171 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTA 216



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 5/192 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +A +  I + + GT +   +   ++L  ++   Y+++FRN P L+ +   
Sbjct: 13  LMQGLFLTLKIALATCIISIVFGTFLAITKNYGDRLSKFLAACYIDIFRNTPLLLWMLAA 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVLGIVLSLF 203
              +         +     G  L    +    +    N+         +S   G   +LF
Sbjct: 73  CFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLF 132

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L + F +     L  +  +      L  L +  L Y        L  F  I      
Sbjct: 133 YIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILAKLTSFEEILAMIGV 192

Query: 264 PEFMSLYIALSC 275
              +   I  S 
Sbjct: 193 VAGIYFIICFSL 204


>gi|212218910|ref|YP_002305697.1| arginine transport system permease protein [Coxiella burnetii
           CbuK_Q154]
 gi|212013172|gb|ACJ20552.1| arginine transport system permease protein [Coxiella burnetii
           CbuK_Q154]
          Length = 173

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 2/170 (1%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               F+I G P LV I + Y        L +   I  S +   F    IAL+  T+A+  
Sbjct: 1   MFFFFIIRGTPLLVQIFIIYYGSGQFHWLRE--TILWSVLKRPFGCAVIALAINTSAYTT 58

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            ++R  + ++P G++EAA ALGL+  KA + +++P+A+R ++P  +++ + +LK +SLA 
Sbjct: 59  VLLRGAIRSIPTGEIEAAKALGLSRWKAYQRIIIPRAIRIVLPAYSNEVIMILKGTSLAG 118

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   D++ V   +I  T + I +  +   IY  L+ +I      L  K+
Sbjct: 119 TITLMDIMGVTRHLIAMTYEVIPLFFLAGIIYFVLNALIMSVFYFLEKKL 168


>gi|306833971|ref|ZP_07467095.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
 gi|304423972|gb|EFM27114.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus bovis ATCC 700338]
          Length = 215

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 27/222 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S ++G VL++      R+      + +  +YI    +  +P
Sbjct: 11  FILQGLWLTIYISFIAIVLSTLIGTVLAVM-----RNGKNPILRWISSIYIEF--VRNVP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I + + +   K                   +   A + +T+A +AEI+R GL  V 
Sbjct: 64  NLLWIFIIFLIFQMKSTP----------------AGITAFTVFTSAALAEIIRGGLNGVD 107

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA +A G+T+ +    ++ PQA R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 108 DGQTEAGLAQGMTNLQIFIYIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQELFGK 167

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++ +     Q   +  +   IY  ++  I+    RL  K
Sbjct: 168 SQILMGRYFEANQVFTLYALIAAIYFVINFTISTISRRLAKK 209



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 40/71 (56%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  + IL G   T +++F  ++ +T+IGT++   R   N ++ WI  +Y+E  RN+P 
Sbjct: 5   TPTNISFILQGLWLTIYISFIAIVLSTLIGTVLAVMRNGKNPILRWISSIYIEFVRNVPN 64

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 65  LLWIFIIFLIF 75


>gi|167562820|ref|ZP_02355736.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia oklahomensis EO147]
          Length = 241

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PL+    F  FG+ +L+   +   L  +         +     S EF++ ++ LSC
Sbjct: 60  FRNTPLVVQLLFWYFGVASLLPEPVMAWL--NARHAIAVGGVELHWPSFEFVAGWVGLSC 117

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE   +GL  VP GQ  AA ALGL   +  R V+LPQA+R  +PPL  QY+NL+
Sbjct: 118 YTSAFVAEEFHAGLRGVPAGQYHAASALGLAPLQTLRFVVLPQAVRIALPPLFGQYMNLI 177

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           KNSSL +A+G A+L      +  +T +      +   +Y++   ++         +
Sbjct: 178 KNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYIAAVAVVEALAQWTVRR 233



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 34/79 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT  G  +   R +           YV  FRN P +V 
Sbjct: 9   YLMWLWQGFLLTLGLSLAAAVAATFAGFALAIARHAKRAWPRRAAAAYVVAFRNTPLVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V S+LP P  + 
Sbjct: 69  LLFWYFGVASLLPEPVMAW 87


>gi|150017369|ref|YP_001309623.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149903834|gb|ABR34667.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 225

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 12/221 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +            +FV + +  I + + +         +T K+  +L+I+   +     +
Sbjct: 9   IFQENNIKRLFEGLFVTAEIAFISIIIGSILGILIGLSRTTKSKAILFINRVYLEAFRII 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             +   +  +F        N  G            I  S + AA + +IVR  L ++P+ 
Sbjct: 69  PTLVWLFVFYFGVTTALNINLSGEVVS-------VIVFSLWGAAEMGDIVRGSLQSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+E+  ALGL + +  R VL+PQA+R +IP   +    ++K +SL V +G  D+V +G  
Sbjct: 122 QIESGKALGLNYYQIYRYVLMPQAIRRMIPGTINLATRMIKTTSLVVLIGVIDVVKMGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II  +          I     F+Y  +   ++    RL +K
Sbjct: 182 IIESSRFQFPTASFWIYGFIFFLYFIICYPLSKISKRLESK 222


>gi|307693895|ref|ZP_07636132.1| putative ABC-type polar amino acid transport system, permease
           protein [Ruminococcaceae bacterium D16]
          Length = 250

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 99/226 (43%), Gaps = 22/226 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLF-ATRLSRHFHEKTGKALPLL-------------YISTFLI 229
                  + +  LG+++S     R +     +     PLL              +  ++I
Sbjct: 26  QLFFITLIGALPLGLIISFGSMNRWAPLGFLRKPGRSPLLNRLLGLQPISLVCRLLVWII 85

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
            G P ++ I   + +        Q  F   S  S   +++ +A     A + +EI R G+
Sbjct: 86  RGTPLVLQIIALFYVP-----GMQKWFSWPSGESGRMLAVCVAFIINYACYFSEIYRGGI 140

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             VP+GQ EA   LG+T  +  R + L Q ++ I+PP++++ + L+K++SLA  +   ++
Sbjct: 141 QGVPKGQQEAGQVLGMTKLQIFRHITLLQMIKRIVPPMSNEIITLVKDTSLARVIALQEV 200

Query: 350 VSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +G + +   +     +  +      YL  S ++ L + +L  K+
Sbjct: 201 IWMGESFMKGNSGIAGLVWPLFFTAVYYLIFSGVVTLLLGQLEKKM 246


>gi|297199926|ref|ZP_06917323.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
 gi|197710394|gb|EDY54428.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sviceus ATCC 29083]
          Length = 216

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 88/219 (40%), Gaps = 18/219 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                       +      +T+   A   + SFVLG+V +L     SR      G     
Sbjct: 2   EWDWSAVGDFMPQFWDGLLVTLQALALGSLISFVLGLVWALLMRAPSRFVRWPVG----- 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             + T  +   P LV +   + +                       +  I +  + + + 
Sbjct: 57  --VVTEFVRNTPLLVQLFFLFYV-----------LPEWGVTLSALATGVIGIGLHYSTYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++ R+G+ AVP GQ EAA AL L   +  ++V+LPQA+R ++P L +  +++LK+  + 
Sbjct: 104 MQVYRAGIEAVPAGQWEAATALNLPRVRTWQVVILPQAIRRVVPALGNYVISMLKDIPML 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           + +   +++        +  Q  E + +    ++ +S +
Sbjct: 164 MVITVLEMLGQARLFAQEHFQFTEPLTVIGVAFIVISYL 202



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 38/110 (34%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +++   +      G + T      G + + ++G +      + ++ V W   V  E  R
Sbjct: 4   DWSAVGDFMPQFWDGLLVTLQALALGSLISFVLGLVWALLMRAPSRFVRWPVGVVTEFVR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           N P LV +FFL+  +               G+ L+    +         A
Sbjct: 64  NTPLLVQLFFLFYVLPEWGVTLSALATGVIGIGLHYSTYTMQVYRAGIEA 113


>gi|255973160|ref|ZP_05423746.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|255976203|ref|ZP_05426789.1| amino acid ABC transporter permease [Enterococcus faecalis T2]
 gi|256618701|ref|ZP_05475547.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ATCC 4200]
 gi|256762125|ref|ZP_05502705.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256958614|ref|ZP_05562785.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis DS5]
 gi|256962287|ref|ZP_05566458.1| amino acid ABC transporter permease [Enterococcus faecalis Merz96]
 gi|256965482|ref|ZP_05569653.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704]
 gi|257078032|ref|ZP_05572393.1| amino acid ABC transporter permease [Enterococcus faecalis JH1]
 gi|257085622|ref|ZP_05579983.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis Fly1]
 gi|257086472|ref|ZP_05580833.1| amino acid ABC transporter permease [Enterococcus faecalis D6]
 gi|257089529|ref|ZP_05583890.1| ABC polar amino acid transporter permease [Enterococcus faecalis
           CH188]
 gi|257415731|ref|ZP_05592725.1| amino acid ABC transporter permease [Enterococcus faecalis AR01/DG]
 gi|257422966|ref|ZP_05599956.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|255964178|gb|EET96654.1| amino acid ABC transporter, permease [Enterococcus faecalis T1]
 gi|255969075|gb|EET99697.1| amino acid ABC transporter permease [Enterococcus faecalis T2]
 gi|256598228|gb|EEU17404.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis ATCC 4200]
 gi|256683376|gb|EEU23071.1| amino acid ABC transporter, permease [Enterococcus faecalis T3]
 gi|256949110|gb|EEU65742.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis DS5]
 gi|256952783|gb|EEU69415.1| amino acid ABC transporter permease [Enterococcus faecalis Merz96]
 gi|256955978|gb|EEU72610.1| ABC-type amino acid transporter [Enterococcus faecalis HIP11704]
 gi|256986062|gb|EEU73364.1| amino acid ABC transporter permease [Enterococcus faecalis JH1]
 gi|256993652|gb|EEU80954.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Enterococcus faecalis Fly1]
 gi|256994502|gb|EEU81804.1| amino acid ABC transporter permease [Enterococcus faecalis D6]
 gi|256998341|gb|EEU84861.1| ABC polar amino acid transporter permease [Enterococcus faecalis
           CH188]
 gi|257157559|gb|EEU87519.1| amino acid ABC transporter permease [Enterococcus faecalis ARO1/DG]
 gi|257164790|gb|EEU94750.1| ABC amino acid transporter [Enterococcus faecalis X98]
 gi|323480356|gb|ADX79795.1| ABC transporter, permease protein [Enterococcus faecalis 62]
          Length = 215

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 4/159 (2%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L ++  ++  + P L     I          +  ++ + +T A +AEI+R GL  V +G
Sbjct: 51  LLASIYVEVVRNIPNLLWIYVIFLIFKIKSTPAGIVSFTVFTTAALAEIIRGGLNGVDKG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q+EAA + G ++ +    ++LPQA+R+++P + SQ++ ++K++S L   +   +L     
Sbjct: 111 QIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSY 170

Query: 355 TI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +     QTGQ   I  I   IY  ++  I+ F   L+ 
Sbjct: 171 ILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSR 209



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +++F  +I +TI GT++   R   +  +  +  +YVEV RNIP L+ I
Sbjct: 10  FQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTHGPLKLLASIYVEVVRNIPNLLWI 69

Query: 146 FFLYKSV 152
           + ++   
Sbjct: 70  YVIFLIF 76


>gi|55821558|ref|YP_140000.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823486|ref|YP_141927.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55737543|gb|AAV61185.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739471|gb|AAV63112.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
 gi|312278895|gb|ADQ63552.1| Amino acid (Glutamine) ABC transporter permease protein
           [Streptococcus thermophilus ND03]
          Length = 226

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+V+S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 22  HIAVMGIIGSFLLGLVVSVI-----RHYRVPILSQLSTAYIE--LSRNTPFLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V        + L     +++AE  RSGL AV + Q E  +++
Sbjct: 74  ----------FGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEAVSQTQHEVGLSI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA+   +P  ++  + L+K +S+  AV  ADL+ V   ++    + 
Sbjct: 124 GLTPFQVFRYVVLPQAVAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLMGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DVALGMLVVAYLLMLLPISLVFSWIERRLR 213



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G+I + ++G +V   R     +++ +   Y+E+ 
Sbjct: 1   MDWSIVQQYLPFYQKAFFLTLHIAVMGIIGSFLLGLVVSVIRHYRVPILSQLSTAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +         G+          +      A
Sbjct: 61  RNTPFLIQLFFLYFGLPRIGLVLSSEACAVVGLIFLGGSYMAESFRSGLEA 111


>gi|329944506|ref|ZP_08292671.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328530271|gb|EGF57150.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 218

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 14/212 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I V S++ G+VL      + R       +AL   +++         L+          
Sbjct: 19  LVISVLSYLGGLVLG-SLMAIFRVGPIPPLRALGAAWVTVACNIPNLCLM---------- 67

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              VL            P F S+ +AL   ++ F+ E VRSG+ +V +GQ+EAA ALG+ 
Sbjct: 68  ---VLVGLALPHAGITIPLFWSVIVALIFSSSGFVCETVRSGINSVSKGQIEAARALGMP 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R ++LPQA+   I PL + ++  L  SSLA AVG  +L +V   I       +  
Sbjct: 125 FGLIIRGIVLPQALARTIQPLVNIFIACLIGSSLAAAVGVVELTAVTQRINQDRAAGVIT 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L     YL+++         L  ++    K+
Sbjct: 185 FLTSGLTYLAIAFAATRLGGLLERRLEFMGKE 216



 Score = 39.5 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 47/140 (33%), Gaps = 9/140 (6%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++    +   ++G+L+   R+     +  +   +V V  NIP L ++  +  +
Sbjct: 14  GLLATLVISVLSYLGGLVLGSLMAIFRVGPIPPLRALGAAWVTVACNIPNLCLMVLVGLA 73

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA-------KIFVFSFVLGIVL--SL 202
           +            +   +  ++ G    T+    N+                G+++   +
Sbjct: 74  LPHAGITIPLFWSVIVALIFSSSGFVCETVRSGINSVSKGQIEAARALGMPFGLIIRGIV 133

Query: 203 FATRLSRHFHEKTGKALPLL 222
               L+R         +  L
Sbjct: 134 LPQALARTIQPLVNIFIACL 153


>gi|165873651|gb|ABY67951.1| phosphate-solubilizing protein [Burkholderia cepacia]
          Length = 140

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 61/131 (46%)

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   F++  + L     A+  E  R   ++VPRGQ+EA  A G+T  +    ++ P
Sbjct: 10  WDQIDIDPFLAGVLVLGFIYGAYFTETFRGAFLSVPRGQLEAGSAYGMTSWQVFTRIMFP 69

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSL 377
           Q MR  +P + + +  L+K+++L   +G AD+V         T +     LI   +YL++
Sbjct: 70  QMMRFALPGIGNNWQVLVKSTALVSIIGLADVVKASQDAGKGTLRFFFFTLIAGAVYLAI 129

Query: 378 SIMIALFMNRL 388
           + +    +  L
Sbjct: 130 TTISNFVLMWL 140


>gi|330874082|gb|EGH08231.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 221

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 98/226 (43%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + +           ++     +LG+ L +    + R +  +    +  +Y+  
Sbjct: 5   FDFTPVLQNIDALLRGALFTLELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE- 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI   P LV +   +           F          E+ +  +A+     A+  EI+R
Sbjct: 63  -LIRNTPFLVQLFFIF-----------FGLPSLGVQISEWQAAVLAMVINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L      I ++  ++ E  ++   IYL+++++I   +  +  + 
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLIRQLLAWIGRRY 216



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T       A+L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQNIDALLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|325063356|gb|ADY67046.1| amino acid ABC transporter, permease protein [Agrobacterium sp.
           H13-3]
          Length = 216

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 89/220 (40%), Gaps = 14/220 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             +      + T   + +    L +++ +      R  +     +LP+     F      
Sbjct: 7   NDIPLYAAGLFTTLTVSIAGIALAVIIGIVLAAALRSRYMVI--SLPVRLYVEFARGAPL 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+L    Y       +L                +  + L  Y A   AEI R+G  AVP
Sbjct: 65  ALILFLFYYGGPQLGLIL------------SPCAAGIVGLGLYGAGPFAEIFRAGFNAVP 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RG++EAA  LG+T       + +PQA+   +P    Q +NL+K S++   +  ++L  V 
Sbjct: 113 RGEIEAAGMLGITSGDTFLHIQMPQALALTLPASVGQAINLVKESAVLSVITLSELTKVA 172

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           GTI + T   +   L    +Y ++  +++     L ++++
Sbjct: 173 GTISSITFAVVTPYLTIALLYWAIVEILSRLGLYLESRLS 212



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%)

Query: 91  VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYK 150
            G   T  ++ +G+  A IIG ++ A   S   +++   R+YVE  R  P  +++F  Y 
Sbjct: 14  AGLFTTLTVSIAGIALAVIIGIVLAAALRSRYMVISLPVRLYVEFARGAPLALILFLFYY 73

Query: 151 SVLSV 155
               +
Sbjct: 74  GGPQL 78


>gi|194398286|ref|YP_002037360.1| ABC transporter permease [Streptococcus pneumoniae G54]
 gi|194357953|gb|ACF56401.1| ABC transporter, permease protein [Streptococcus pneumoniae G54]
          Length = 226

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 18/208 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL A+ + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              + + +  YL + + I+L  + +  +
Sbjct: 184 DIALAMLVXAYLIMLLPISLVFSWIERR 211



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P L+ +FFLY  +  +  +    +    G+          +      A  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAIS 113


>gi|83719898|ref|YP_442970.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis E264]
 gi|167620110|ref|ZP_02388741.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis Bt4]
 gi|83653723|gb|ABC37786.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia thailandensis E264]
          Length = 241

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 2/235 (0%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
                +      ++         +      A +  F+            R +   +    
Sbjct: 1   MNAWLAPKYLMWLWQGFLLTLGLSFAAAVAATLAGFALASARHARRAWLRRAAAAYVVAF 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PL+    F  FG+ +L+   +   L+  +  +     +     S EF++ ++ LS Y
Sbjct: 61  RNTPLVVQLLFWYFGVASLLPEPVMAWLNTRRAAVVG--GVELHWPSFEFVAGWVGLSGY 118

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           T+AF+AE  ++GL  VP GQ  AA ALGL+ R+  R V+LPQA+R  +PPL  QY+NL+K
Sbjct: 119 TSAFVAEEFQAGLRGVPAGQYRAAGALGLSPRQTFRFVVLPQAVRIALPPLFGQYMNLIK 178

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           NSSL +A+G A+L      +  +T +      +   +Y++    +  F      +
Sbjct: 179 NSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYIAAIAAVEAFAQWTARR 233


>gi|70730911|ref|YP_260652.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf-5]
 gi|68345210|gb|AAY92816.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 220

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 1/215 (0%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              + T    +      G VLS+  T  S       G  L L   +       P+L+++ 
Sbjct: 1   MNQILTMWLAWFPELWKGFVLSIQVTAASLALGVVLGLLLALGVSAPRRAVRYPSLLIVE 60

Query: 240 LKYQLH-FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           L              F           F +  +AL+  TAA+ +EI+R G+ AV +GQ E
Sbjct: 61  LGRGAPALILLQYFYFGLPSAGLTLSSFWAAALALAYCTAAYTSEIIRGGIEAVAQGQNE 120

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA  +GL    A R ++LPQAMR  +P L    + + + +SL   +   ++VS    I +
Sbjct: 121 AAEVIGLNRFDALRFIILPQAMRVALPSLLGFSIMMFQAASLCFTIALPEIVSRASAIGS 180

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            T + + ++ +   +Y ++     L +  L  K+A
Sbjct: 181 STFEYMPVLTLAGLMYAAVCAPATLGVAALEKKLA 215


>gi|210630270|ref|ZP_03296360.1| hypothetical protein COLSTE_00244 [Collinsella stercoris DSM 13279]
 gi|210160596|gb|EEA91567.1| hypothetical protein COLSTE_00244 [Collinsella stercoris DSM 13279]
          Length = 290

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 103/250 (41%), Gaps = 19/250 (7%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +++ F +Y+   +    P +     +G        ++    +     + + +  + +VL 
Sbjct: 46  VLLGFVVYQFWATGQLDPRYWEFFTWGS-----TWAYLMAGLRGTLTVALTAGAIALVLG 100

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L    L R    +   AL  +    F       L+         +               
Sbjct: 101 LALM-LGRTSGIRWLAALCRVVTDFFRGVPSLLLIYFFFLVVPQYG-------------I 146

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               F  + + ++   +  +AE+ R+G+ AVPRGQ EAA+ALG+   +    ++LPQA+R
Sbjct: 147 RMSSFWMITLPVALAASGVLAEVFRAGMNAVPRGQTEAALALGMRPFRVKLKIVLPQAIR 206

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            +IP L SQ + ++K++++A  V + D++     +I      +   L+   IY+ L+  I
Sbjct: 207 YVIPSLISQLVVVVKDTTVAYVVSYPDMLQNARVLITNYDALVSTYLVVAVIYILLNYAI 266

Query: 382 ALFMNRLNAK 391
                 +  +
Sbjct: 267 NQLSVYVARR 276



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 38/84 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T  +A +    A ++G  +  GR S  + +A +CRV  + FR +P L++I
Sbjct: 75  WAYLMAGLRGTLTVALTAGAIALVLGLALMLGRTSGIRWLAALCRVVTDFFRGVPSLLLI 134

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGM 169
           +F +  V           ++   +
Sbjct: 135 YFFFLVVPQYGIRMSSFWMITLPV 158


>gi|183602354|ref|ZP_02963720.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683331|ref|YP_002469714.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241191292|ref|YP_002968686.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196698|ref|YP_002970253.1| ABC transporter permease [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218273|gb|EDT88918.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219620981|gb|ACL29138.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240249684|gb|ACS46624.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240251252|gb|ACS48191.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295794285|gb|ADG33820.1| permease protein of ABC transporter system [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 218

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 94/228 (41%), Gaps = 10/228 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             +   ++         A + +F  V GI L++    +      +T +   L  I+T  I
Sbjct: 1   MFDWAFVAKYAPFFVNGAWMTLFISVFGIALAILTGIICAAI--ETARIPVLRQITTVYI 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
                  L+   Y L+F  P +          V    +   + L     +++AE +R+GL
Sbjct: 59  EVSRNTPLLVQLYFLYFGLPKM--------GFVWSAELCAIVGLGFLGGSYMAESMRAGL 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            +VP+ Q E A  LG    +    V++PQA+    P + +  + L+K SS+  A+  AD+
Sbjct: 111 QSVPQIQRENAYMLGFNTWQTLTRVIVPQAVSISTPGIVANVIFLIKESSVVSAIALADV 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           + +   ++       E + + +  YL + + I++    L  +     +
Sbjct: 171 MYMAKDLMGMYYNTYEALFMLIVTYLIILLPISILGTWLERRFDYARR 218



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 36/71 (50%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G   T +++  G+  A + G +  A   +   ++  I  VY+EV RN P LV 
Sbjct: 10  YAPFFVNGAWMTLFISVFGIALAILTGIICAAIETARIPVLRQITTVYIEVSRNTPLLVQ 69

Query: 145 IFFLYKSVLSV 155
           ++FLY  +  +
Sbjct: 70  LYFLYFGLPKM 80


>gi|117618504|ref|YP_855199.1| arginine ABC transporter, permease protein ArtQ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117559911|gb|ABK36859.1| arginine ABC transporter, permease protein ArtQ [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 216

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 7/216 (3%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            LS           + + S V G+VL+L  +             +  L   T LI GLP 
Sbjct: 1   MLSLLLDAAWMTLGLALASLVGGMVLALAFSAAELSKQRALVWPVATL---TTLIRGLPE 57

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+++   Y           F   G       F    +ALS   A++  + +R+ L AVP 
Sbjct: 58  LLVVLFIYFGSTQV----LFLITGEYVEFSPFACGVLALSLLFASYATQTLRAALNAVPA 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ  AA+ALGL  R     ++LPQA R  +P L +Q+L LLK+++L   +G  +++    
Sbjct: 114 GQRLAALALGLGKRHIFFRIVLPQAWRHALPGLGNQWLVLLKDTALVSLIGVNEMMRQAQ 173

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                T Q          IYL++S++    + + + 
Sbjct: 174 MASASTYQPFTWYAAAALIYLAISLVSEFGLKQASR 209


>gi|28872358|ref|NP_794977.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855613|gb|AAO58672.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|330965546|gb|EGH65806.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331017860|gb|EGH97916.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 221

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 98/226 (43%), Gaps = 14/226 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F      + +           ++     +LG+ L +    + R +  +    +  +Y+  
Sbjct: 5   FDFTPVLQNIDVLLRGALFTLELTAIGTLLGVSLGIVG-AVVRAWKIQPFATIFAIYVE- 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI   P LV +   +           F          E+ +  +A+     A+  EI+R
Sbjct: 63  -LIRNTPFLVQLFFIF-----------FGLPSLGVQISEWQAAVLAMVINLGAYSTEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+P+GQ+EA+ AL +   +A R V+L  A+  + P L+SQ + ++  S++   +  
Sbjct: 111 AGIQAIPKGQLEASAALAMNRYEAFRYVVLVPALGKVWPALSSQIIIVMLGSAVCSQIAT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L      I ++  ++ E  ++   IYL+++++I   +  +  + 
Sbjct: 171 EELSFFANFIQSRNFRSFETYIVTTLIYLAMALLIRQLLAWIGRRY 216



 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +T        +L G + T  L   G +    +G +    R    +  A I  +YVE+ R
Sbjct: 6   DFTPVLQNIDVLLRGALFTLELTAIGTLLGVSLGIVGAVVRAWKIQPFATIFAIYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P LV +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFLVQLFFIFFGLPSLGVQISEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|325690798|gb|EGD32799.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
 gi|327463112|gb|EGF09433.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
          Length = 219

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S V G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTVFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 PGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSRKLSQRWA 215



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +T+ GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTVFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|16273099|ref|NP_439333.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           Rd KW20]
 gi|260581122|ref|ZP_05848943.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae RdAW]
 gi|1168524|sp|P45089|ARTM_HAEIN RecName: Full=Arginine ABC transporter permease protein ArtM
 gi|1574102|gb|AAC22828.1| arginine ABC transporter, permease protein (artM) [Haemophilus
           influenzae Rd KW20]
 gi|260092251|gb|EEW76193.1| ectoine/hydroxyectoine ABC transporter, permease EhuC [Haemophilus
           influenzae RdAW]
          Length = 227

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K  K+   LY++ F   G P LV   L Y            +      +S  +    +A
Sbjct: 42  NKWIKSAVNLYLTLFT--GTPLLVQFFLIYAGP--GQFQWIIDSPLWYVLSNAWFCAALA 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+  +AA+  ++    + A+P+GQ E+  ALGL   +    +L+P A++  +P  +++ +
Sbjct: 98  LALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTL-KILIPYALKRALPSYSNEII 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + K ++LA  +   D++     +      A+ I  I   IYL ++ +  L + +L  K+
Sbjct: 157 LVFKGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRKLEKKV 216

Query: 393 ALKEK 397
              E+
Sbjct: 217 LAFER 221


>gi|222106504|ref|YP_002547295.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
 gi|221737683|gb|ACM38579.1| ABC transporter membrane spanning protein (amino acid)
           [Agrobacterium vitis S4]
          Length = 222

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 14/204 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + +    +  ++ +F   ++R    +  ++  + ++   LI   P LV I   +    
Sbjct: 25  IGLAIAGMSIATIIGIFG-VVARRSPSRILRSATIGFVE--LIRNTPFLVQIFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F            ++  +AL     A+  EI+R G+ ++ +GQ+EA +ALGL 
Sbjct: 78  -------FALPQIGVRLNPTVTAIVALGLNGGAYAIEIIRGGVDSIGKGQVEAGLALGLH 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++L  A+R++ P LTSQ++ L   +S+  ++   +L SV   I   T ++ E+
Sbjct: 131 RAQILRHIILKPALRAVYPSLTSQFVMLTLTTSVCTSIAAYELTSVAQKIEADTFRSFEV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
                 +YL +S ++      ++ 
Sbjct: 191 YFSITLLYLVISSLMMGAFALISR 214



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 3/147 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +++  + T  LA +GM  ATIIG      R S ++++      +VE+ RN P LV IFF+
Sbjct: 17  LILACLATIGLAIAGMSIATIIGIFGVVARRSPSRILRSATIGFVELIRNTPFLVQIFFI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           + ++  +    + ++     + LN    +   +    ++         G+ L L   ++ 
Sbjct: 77  FFALPQIGVRLNPTVTAIVALGLNGGAYAIEIIRGGVDSIGK-GQVEAGLALGLHRAQIL 135

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTL 235
           RH   K   AL  +Y S    F + TL
Sbjct: 136 RHIILKP--ALRAVYPSLTSQFVMLTL 160


>gi|229816475|ref|ZP_04446775.1| hypothetical protein COLINT_03528 [Collinsella intestinalis DSM
           13280]
 gi|229807942|gb|EEP43744.1| hypothetical protein COLINT_03528 [Collinsella intestinalis DSM
           13280]
          Length = 286

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 14/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            +  F       +    +     + + +  + +VL L    L R    +  +A   +   
Sbjct: 61  YWMFFTQLSTWRYLLAGLRGTLTVALTAGGIALVLGLALM-LGRTSGIRVLEAACRVVTD 119

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F          + L Y      P                F  L + ++   +  +AE+ 
Sbjct: 120 FFRGVPS-----LLLIYFFFLVVPQY--------GIRMSSFWMLALPVALAASGVLAEVF 166

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ AVPRGQ EAA+ALG++  +    ++LPQA+R +IP L SQ + ++K++++A  V 
Sbjct: 167 RAGVNAVPRGQTEAALALGMSPFRVKLKIVLPQAIRYVIPSLISQLVVVVKDTTVAYVVS 226

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + D++     +I      +   L+   IY+ L+  I      +  +
Sbjct: 227 YPDMLQNARVLITNYDALVSTYLVVAVIYILLNYAINQLSVYVARR 272



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 37/84 (44%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  +A +    A ++G  +  GR S  +++   CRV  + FR +P L++I
Sbjct: 71  WRYLLAGLRGTLTVALTAGGIALVLGLALMLGRTSGIRVLEAACRVVTDFFRGVPSLLLI 130

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGM 169
           +F +  V           +L   +
Sbjct: 131 YFFFLVVPQYGIRMSSFWMLALPV 154


>gi|209552105|ref|YP_002284021.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539698|gb|ACI59629.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 222

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 13/226 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    +        +    +      V G +L L    +SR       + L  +Y+  
Sbjct: 4   FDITFVAKYWQTLLSGLGLTLEFTAICIVSGTLLGLLLALMSR-SPNALVRTLVRMYVE- 61

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI G+P L+L+   + + F  PV+              F S  +AL+ +  A   E  R
Sbjct: 62  -LIRGVPVLILL---FWIFFCLPVVTGLEI-------SNFFSSTLALTLFMGAATCESFR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           + L ++P  Q +A  ALGLT++     V++P      IP L S  + L K SSLA AVG 
Sbjct: 111 AALKSIPHEQYDACTALGLTNKSRLLDVVVPLMAMRAIPNLLSNTVALFKESSLASAVGT 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L+ +G  I N T + IE++ +   +Y  +  ++   ++    ++
Sbjct: 171 VELMYIGQNIANSTARPIEVLTVVGILYFIVGFVLTRLVSLAETRV 216


>gi|332076440|gb|EGI86903.1| amino ABC transporter, permease , 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Streptococcus pneumoniae GA41301]
          Length = 219

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKIKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|329298255|ref|ZP_08255591.1| arginine transporter permease subunit ArtQ [Plautia stali symbiont]
          Length = 152

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 58/108 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M++ +AL+   +A+ ++ +R  L AVP GQ+E+  ALG+        +++PQ  R  +P 
Sbjct: 13  MTVGLALAMLYSAYASQTLRGALKAVPSGQLESGQALGMKKSAIFFRLIMPQMWRHALPG 72

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           L +Q+L LLK+++L       DL+    +I  +  +     L+   IY
Sbjct: 73  LGNQWLVLLKDTALVSLTSVNDLMLQTKSIATRNQEPFTWYLVAAAIY 120


>gi|312115906|ref|YP_004013502.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311221035|gb|ADP72403.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 358

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
                S  LGIVL+L      R       + L + +I  +    L T++ +A        
Sbjct: 159 TGIAASLPLGIVLALM-----RRSSWPVPRWLAICFIEFWRGVPLVTVLFMAAV------ 207

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
             +L  F   G S   P       A++ + +A++AE++R GL +VP  Q+ A  ALGL +
Sbjct: 208 --MLPLFLPEGASVNKP--ARALFAIAVFASAYMAEVIRGGLQSVPENQVTAGRALGLRY 263

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-----NQTGQ 362
            +   LV+LPQA+RS +P +   ++ LLK+++L + +G  D + +          + +  
Sbjct: 264 SQILALVILPQAIRSALPGIAGTFIGLLKDTTLVLVIGLFDFLGMIQLAAADPAWSASTT 323

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +        ++ SL   IA     L    A   +
Sbjct: 324 TLTGYAFAALVFWSLCYAIARVSAYLERVTAESRR 358



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 35/79 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++++G+  +  +G ++   R S+  +  W+   ++E +R +P + V+F     
Sbjct: 149 GLTLTLLVSYTGIAASLPLGIVLALMRRSSWPVPRWLAICFIEFWRGVPLVTVLFMAAVM 208

Query: 152 VLSVLPIPDHSIVLPFGMF 170
           +   LP           +F
Sbjct: 209 LPLFLPEGASVNKPARALF 227


>gi|163843976|ref|YP_001628380.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis ATCC 23445]
 gi|163674699|gb|ABY38810.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella suis ATCC 23445]
          Length = 232

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 14/233 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            + F +             + TN  I + + +L ++     T L R        A+  + 
Sbjct: 13  TMDFSVSALGGAFPQLLPAIGTNLVISIIAMILALIGGTALTIL-RTLGIAPLNAVIGVV 71

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           IS   I G P LV I L Y   +  P L                +  +A++  ++ FI E
Sbjct: 72  ISF--IRGTPILVQIFLFY---YGLPAL--------GLDLSPIQAGILAIAFNSSIFITE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R GL  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   
Sbjct: 119 IMRGGLSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSV 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 179 ITVVEVLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 231


>gi|330686403|gb|EGG98003.1| ABC transporter, permease protein [Staphylococcus epidermidis
           VCU121]
          Length = 227

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 103/214 (48%), Gaps = 9/214 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                 +     +     + + + +L  +L L  T + R            +Y S   + 
Sbjct: 5   QWLDLFNQVVQQLPITLIMIICALILATILGLILT-IIRIKQVPYLSTCVRIYQSF--MR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P L+ + L Y   F  P       I  +     F  + +A S ++AA+++E+ R+G +
Sbjct: 62  STPLLLQLFLVY---FALPQFLLIFHININHFDRLFF-IILAFSLHSAAYLSEVFRAGYL 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V   Q+EA +++GL++ +  + +++PQA+R+ IP LT+Q + L+K++SLA  +G  D++
Sbjct: 118 SVDYRQIEAGLSVGLSYPRILKDIIIPQALRNSIPNLTTQIIELIKDTSLAFTIGIIDMM 177

Query: 351 SVGGTIINQTGQA--IEIILIWMFIYLSLSIMIA 382
                II        +E+ ++   IY  L+++I 
Sbjct: 178 GQVQLIIGNNYGLGMLEVYVVISIIYWLLALIIQ 211



 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 35/76 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    +I ATI+G ++   R+     ++   R+Y    R+ P L+ +F +Y ++   
Sbjct: 20  TLIMIICALILATILGLILTIIRIKQVPYLSTCVRIYQSFMRSTPLLLQLFLVYFALPQF 79

Query: 156 LPIPDHSIVLPFGMFL 171
           L I   +I     +F 
Sbjct: 80  LLIFHININHFDRLFF 95


>gi|190892981|ref|YP_001979523.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190698260|gb|ACE92345.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 230

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 15/228 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    LT+     IFV S ++G + ++   R          + L + Y   F   G+
Sbjct: 12  WDILGAVPLTLAMALVIFVLSTIIGSLFAMVEYR-----RIPVLRQLVVAYKVAF--KGV 64

Query: 233 PTLVLIALKYQLHFDKPVLGQF--NFIGG---STVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P +V+I L Y   +  P   QF  + +GG      +P +++L +AL+   AAF AE+V+ 
Sbjct: 65  PMVVVIFLAY---YGLPSTLQFLTSLVGGEYNGHSTPNWVTLIVALTACVAAFQAEVVKG 121

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L +   GQ +AA +LG    +  R V+LPQ + + IP L + ++ ++K  SL  A+   
Sbjct: 122 ALNSFDTGQADAAYSLGYRKSQLFRRVMLPQVVVAAIPDLANSFMVIMKALSLGFAIEVV 181

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           D+ +            +E  L+ + IY+ ++  +    +R    + ++
Sbjct: 182 DIFAQSQLTAALNFYYLEAFLVAVVIYMVIAYAVTQIADRTERALRVR 229


>gi|241203420|ref|YP_002974516.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857310|gb|ACS54977.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 230

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+     IFVFS ++G + ++   R      E       L+     +  G+
Sbjct: 12  WDILGAVPVTLAMALGIFVFSTIVGSLFAMVEYRRVPLLRE-------LVVAYKVVFKGV 64

Query: 233 PTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P +++I L Y   +  P   QF             +P +++L +AL+   AAF AE+V+ 
Sbjct: 65  PMVIVIFLAY---YGLPPTLQFLTSLVGIDYNGHSTPNWITLIVALTACVAAFQAEVVKG 121

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L +   GQ +AA +LG    +  R V+LPQ + + IP L +  + ++K  SL  A+   
Sbjct: 122 ALNSFDNGQADAAYSLGYKRSQVFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVV 181

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +            +E  LI + IY+ ++ ++    +R+   + +
Sbjct: 182 DIFAQSQLTAALNFYYLEAFLIAVVIYMVIAYIVTYAADRMERALRV 228


>gi|302671819|ref|YP_003831779.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus
           B316]
 gi|302396292|gb|ADL35197.1| amino acid ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 224

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 92/235 (39%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   +      +      +  + +I + S V+ IVL L    L      +  KA+  
Sbjct: 1   MHNLGIDVLFKGTNMIRLLKGLWVSVEISLISVVISIVLGLAVGVLM-TSKNRALKAVLR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+ T  I        + L + ++F    +   +           +S  I    +  A +
Sbjct: 60  LYLETVRIMP-----QMVLLFIVYFGSTRVFGLDISAE-------ISAIIVFVFWGTAEM 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++VR  + ++P+ Q E+A ALG    +    ++ PQ +R ++P   +    ++K +SL 
Sbjct: 108 GDLVRGSIKSIPKIQYESAYALGFNKTQVHFYIIFPQTLRRLLPLSINLVTRMIKTTSLV 167

Query: 342 VAVGFADLVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +G  +++ V   II    +     A  +  +   +Y  +   I+     L  +
Sbjct: 168 MMIGIVEVLKVAQQIIEANRRSSPNAAFGVFAVVFLLYFVVCWPISRLAASLEKR 222



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 37/80 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +      +    +L G   +  ++   ++ + ++G  VG    S N+ +  + R+Y+E  
Sbjct: 6   IDVLFKGTNMIRLLKGLWVSVEISLISVVISIVLGLAVGVLMTSKNRALKAVLRLYLETV 65

Query: 137 RNIPPLVVIFFLYKSVLSVL 156
           R +P +V++F +Y     V 
Sbjct: 66  RIMPQMVLLFIVYFGSTRVF 85


>gi|220910018|ref|YP_002485329.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7425]
 gi|219866629|gb|ACL46968.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7425]
          Length = 341

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   LT+  +A   V +F LG++L+L      R       +     YI   ++ GLP +
Sbjct: 140 WNGLLLTLLLSAVSIVLAFPLGVLLAL-----GRQSSLPLLRGFSTTYIE--ILRGLPLI 192

Query: 236 -VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            VL   +  L    P   + +           +     L  + AA++AE VR GL +VPR
Sbjct: 193 GVLFMAQVMLPLVLPADLRLD---------RLLRAIAGLVLFNAAYLAENVRGGLQSVPR 243

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA ALG        L++LPQA+R++IP +  Q+++L+K++SL       +L  +  
Sbjct: 244 GQIEAAQALGFNIPLTLLLIVLPQALRTVIPAIVGQFISLIKDTSLLSLFALLELTGIAR 303

Query: 355 TIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +I+ Q    G   E+ L    IY      ++ +  RL 
Sbjct: 304 SILAQPQFLGHYTEVYLFIGLIYWFFCFTLSHYSRRLE 341


>gi|153952480|ref|YP_001398011.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939926|gb|ABS44667.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 219

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + + F    +    KI + + ++ IV   F   +++++ ++  K L   YI  F   
Sbjct: 5   FNAQNIQFLMQGLFLTLKIALATCIISIVFGTFL-AITKNYGDRLSKFLAACYIDIFRNT 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                 L+       F  PV             P+     I  S YT++ +AEI+R GL 
Sbjct: 64  P-----LLLWMLAACFVLPVFFG--------QFPQAFWGTIGFSLYTSSVMAEIIRGGLN 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L 
Sbjct: 111 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 170

Query: 351 SVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIA 393
               TI+ +     EI+    +   IY  +   +++ +     K A
Sbjct: 171 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTA 216



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 5/194 (2%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             ++ G   T  +A +  I + + GT +   +   ++L  ++   Y+++FRN P L+ + 
Sbjct: 11  QFLMQGLFLTLKIALATCIISIVFGTFLAITKNYGDRLSKFLAACYIDIFRNTPLLLWML 70

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVLGIVLS 201
                +         +     G  L    +    +    N+         +S   G   +
Sbjct: 71  AACFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFT 130

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           LF   L + F +     L  +  +      L  L +  L Y        L  F  I    
Sbjct: 131 LFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILAKLTSFEEILAMI 190

Query: 262 VSPEFMSLYIALSC 275
                +   I  S 
Sbjct: 191 GVVAGIYFIICFSL 204


>gi|237750083|ref|ZP_04580563.1| amino acid abc transporter [Helicobacter bilis ATCC 43879]
 gi|229374270|gb|EEO24661.1| amino acid abc transporter [Helicobacter bilis ATCC 43879]
          Length = 221

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 95/231 (41%), Gaps = 18/231 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
            G   +   L      +     + + S +  +V  L   RL         K+  + YI  
Sbjct: 1   MGELFSLTTLWRVLDGVGVLLFVALISIIFSVVGGLIMGRLM------IVKSKIMQYICR 54

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F +  +  + LIA  + +++  P                     I  S +  A + ++VR
Sbjct: 55  FFLESVRIVPLIAWLFIIYYGIPSSFDL-------HISAITCGIIVFSMWGIAEMGDLVR 107

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           + ++ +P+ Q E+A+ALG +  +    +++PQA+++++P   + +  ++K +SL   +G 
Sbjct: 108 ASILNIPKHQRESALALGFSTWQIEYYIIIPQALKALMPSSINLFGRIIKTTSLLPLIGV 167

Query: 347 ADLVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +L+ VG  +I   G+        +    + IY  L    +   N L  K 
Sbjct: 168 VELLKVGQQLIEVVGRHDASVNFIVYGAILLIYFMLCYPFSYIGNYLEKKF 218


>gi|330941854|gb|EGH44591.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 117

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 67/114 (58%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           ++EIVR  L A+PRGQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L
Sbjct: 3   VSEIVRGALQAIPRGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTL 62

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +G A+L+     +I +T   +E  L   F++  ++  I L   ++  ++AL
Sbjct: 63  LSVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFLINYAIELLGRQIEKRVAL 116


>gi|257418946|ref|ZP_05595940.1| ABC amino acid transporter permease [Enterococcus faecalis T11]
 gi|257160774|gb|EEU90734.1| ABC amino acid transporter permease [Enterococcus faecalis T11]
          Length = 215

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 81/159 (50%), Gaps = 4/159 (2%)

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +L ++  ++  + P L     I          +  ++ + +T A +AEI+R GL  V +G
Sbjct: 51  LLASIYVEVVRNIPNLLWIYVIFLIFKIKSTPAGIVSFTVFTTAALAEIIRGGLNGVDKG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q+EAA + G ++ +    ++LPQA+R+++P + SQ++ ++K++S L   +   +L     
Sbjct: 111 QIEAARSQGFSNWQILYHIVLPQAIRNVLPAIVSQFVTVIKDTSFLYSVIALQELFGKSY 170

Query: 355 TI---INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +     QTGQ   I  I   IY  ++  I+ F   L+ 
Sbjct: 171 ILMGRYAQTGQVFTIYGIVALIYFIINFSISQFSRWLSR 209



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +++F  +I +TI GT++   R   N  +  +  +YVEV RNIP L+ I
Sbjct: 10  FQFLFNGLKLTLYISFVSIILSTIFGTILAVLRNQTNGPLKLLASIYVEVVRNIPNLLWI 69

Query: 146 FFLYKSV 152
           + ++   
Sbjct: 70  YVIFLIF 76


>gi|170702188|ref|ZP_02893094.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170132897|gb|EDT01319.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 241

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 8/170 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  +    I     + ++ L +  +F  P+L            P   ++  AL+    A
Sbjct: 57  PLRVLLLAFIGFFRAIPVLMLIFWTYFLLPML-------LHVDVPGLATVVCALALIGGA 109

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++S
Sbjct: 110 YLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTS 169

Query: 340 LAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRL 388
           LA  VG  +L  V   + N+       I L    +YL L   +      L
Sbjct: 170 LAYIVGVPELSFVATQVNNRLMVYPAPIFLFVAALYLVLCTSLDGAARWL 219


>gi|120403416|ref|YP_953245.1| polar amino acid ABC transporter inner membrane subunit
           [Mycobacterium vanbaalenii PYR-1]
 gi|119956234|gb|ABM13239.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Mycobacterium vanbaalenii PYR-1]
          Length = 226

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 6/221 (2%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+    T+       + + VLG VL+       R         +   Y++      L TL
Sbjct: 12  LAAFWTTIQLTVLAAIGALVLGTVLAAM-----RLAPVPMLNWIGTAYVNIVRNTPL-TL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +++   + L     +               F    + L+ YTA+F+ E VRSG+  VP G
Sbjct: 66  IILFSSFGLSQTLGLTLADRQSATFIADSGFRLAVLGLTVYTASFVCETVRSGVNTVPLG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LG T  +  R+VLLPQA R+++ PL S  + L KN+++A A+G A+   +   
Sbjct: 126 QAEAARSLGFTFGQNLRIVLLPQAFRAVLIPLGSVLIALTKNTTIASAIGVAEAALLMKE 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +I  T   + +  I+   ++ L++ + L    L  ++A+  
Sbjct: 186 MIENTAAVLVVGGIFALGFVILTLPLGLLFGWLGKRMAVAH 226



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 33/71 (46%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL  F  T  L     I A ++GT++ A RL+   ++ WI   YV + RN P  ++
Sbjct: 7   YRAEILAAFWTTIQLTVLAAIGALVLGTVLAAMRLAPVPMLNWIGTAYVNIVRNTPLTLI 66

Query: 145 IFFLYKSVLSV 155
           I F    +   
Sbjct: 67  ILFSSFGLSQT 77


>gi|319441563|ref|ZP_07990719.1| glutamate ABC transport system, permease protein [Corynebacterium
           variabile DSM 44702]
          Length = 229

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 3/226 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                           K+ V S +  ++L    T + R       + +  +YI+T     
Sbjct: 6   WADMGPQLWSVFWMTIKLTVVSGIGALILGTILTAM-RVCPVGILRTVATVYINTIRNTP 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L  L+LI      +    +L   +      V   F    +A   YT+ F+AE +RSG+  
Sbjct: 65  LTLLILIVSLGLYYNLNLLLAN-DSSTSFIVDQNFRLAVVAFVAYTSTFVAESLRSGINT 123

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P GQ EAA +LGLT  +  R V+ PQA+R  I PL +  + L KN+++A  +G ++   
Sbjct: 124 IPFGQAEAARSLGLTFMQNFRYVIFPQALRGSIVPLGNTLIALTKNTTIASVIGVSEASL 183

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  T+        + I  I    ++ L++   LF      + A+K 
Sbjct: 184 LMKTMTENYASDILWIFGIIAVGFMILTLPTGLFFGWAGKRWAVKR 229



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +   F  T  L     I A I+GT++ A R+    ++  +  VY+   RN P  ++I  +
Sbjct: 13  LWSVFWMTIKLTVVSGIGALILGTILTAMRVCPVGILRTVATVYINTIRNTPLTLLILIV 72


>gi|312963773|ref|ZP_07778244.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
 gi|311281808|gb|EFQ60418.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas fluorescens WH6]
          Length = 222

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 12/205 (5%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            +G +L +    +         +     + +   LI   P LV +   +           
Sbjct: 29  AIGAILGVAVGTVGAVVRAWKIQPFAWFFGVYVELIRNTPFLVQLFFIF----------- 77

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F          E+ +  +A+     A+  EI+R+G+ A+PRGQ+EAA AL +T  +A R 
Sbjct: 78  FGLPSLGLKITEWQAAVLAMVINLGAYSTEIIRAGIQAIPRGQLEAAAALAMTRFEAFRH 137

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           V+L  A+  + P L+SQ + ++  S++   +   +L      I ++  +A E   +   +
Sbjct: 138 VVLLPALGKVWPALSSQIIIVMLGSAVCSQIATEELSFAANFIQSRNFRAFETYALTTLV 197

Query: 374 YLSLSIMIALFMNRLNAKIALKEKK 398
           YL +++MI   +N +  +  ++  +
Sbjct: 198 YLCMALMIRQLLNWIGRRFVMRNSR 222


>gi|307727763|ref|YP_003910976.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1003]
 gi|307588288|gb|ADN61685.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1003]
          Length = 248

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 24/192 (12%)

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           V      R     + +  +  P +    F+ FGLP+L                       
Sbjct: 47  VAGPAWARWVVASYVELIRNTPFIVQLFFVFFGLPSL----------------------- 83

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                 E  +  +A++    A+  EIVR+G+ ++ RGQ++AA ALGL  R+  R V+LPQ
Sbjct: 84  -GIHIDEIQAAILAMTVNLGAYAIEIVRAGIDSISRGQVQAAQALGLHGRQVFRYVVLPQ 142

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ ++ P L SQ L ++  S++   +   DL      I ++  ++ E  +I    YL LS
Sbjct: 143 ALANVFPALLSQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITATYLLLS 202

Query: 379 IMIALFMNRLNA 390
           I +   +NR   
Sbjct: 203 IALRQILNRFGR 214


>gi|225856390|ref|YP_002737901.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
 gi|225724420|gb|ACO20272.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae P1031]
          Length = 206

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 18/209 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       + SF+LG+++S+      RH+       +   YI   L    P L+ +   +
Sbjct: 1   MHIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQL---F 50

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L+F  P++          V    +   + L    ++++AE  RSGL A+ + Q E  +A
Sbjct: 51  FLYFGLPLI--------GIVLSSEVCATLGLVFLGSSYMAESFRSGLEAISQTQQEIGLA 102

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +  R V+LPQA   ++P  ++  + L+K +S+  AV  ADL+ V   +I    +
Sbjct: 103 IGLTPLQVFRYVVLPQATAVVLPSFSANVIFLIKKTSVFSAVALADLMYVAKDLIGLYYE 162

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               + + +  YL + + I+L  + +  +
Sbjct: 163 TDIALAMLVVAYLIMLLPISLVFSWIERR 191



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 38/91 (41%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ + ++G +V   R     ++A +   Y+E+ RN P L+ +FFLY  +  +  +
Sbjct: 3   IAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELSRNTPLLIQLFFLYFGLPLIGIV 62

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
               +    G+          +      A  
Sbjct: 63  LSSEVCATLGLVFLGSSYMAESFRSGLEAIS 93


>gi|301793798|emb|CBW36189.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae INV104]
          Length = 219

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL  V +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNTVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 AIEII---LIWMFIYLSLSIMIALFMNRLNAK 391
             ++    ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLCILIALIYFSFNLAISSLSHMLAKR 213



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|168492768|ref|ZP_02716911.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
 gi|183576840|gb|EDT97368.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC3059-06]
          Length = 219

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKIKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVPVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|116070917|ref|ZP_01468186.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. BL107]
 gi|116066322|gb|EAU72079.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. BL107]
          Length = 300

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 9/160 (5%)

Query: 9   VTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           + + F R +F           Q+ + + L       +NN+  N+ ++ L L  G+L   A
Sbjct: 1   MPQIFRRGRFW---------AQLCVVVALITFAGVLINNITVNLIRTGLGLDFGWLWRPA 51

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           GF + +  +PY    SYA A+ +G++N+  +   G++ AT +G   GA R S N+LV  +
Sbjct: 52  GFALAETALPYAPTDSYAWALFIGWLNSLKVILVGLLLATTLGVAAGAARSSRNRLVRSL 111

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
              YV + R +P L+ + F Y      LP      ++ F 
Sbjct: 112 SGGYVALIRQVPLLLQLLFWYFVAFLGLPETPVGGLIHFS 151



 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 115/234 (49%), Gaps = 13/234 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P               +       +    + K+ +   +L   L 
Sbjct: 35  LIRTGLGLDFGWLWRPAGFALAETALPYAPTDSYAWALFIGWLNSLKVILVGLLLATTLG 94

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF----DKPVLGQFNF- 256
           + A   +R    +  ++L   Y+   LI  +P L+ +   Y + F    + PV G  +F 
Sbjct: 95  VAAGA-ARSSRNRLVRSLSGGYV--ALIRQVPLLLQLLFWYFVAFLGLPETPVGGLIHFS 151

Query: 257 -----IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                + G  +S EF ++   L  +T A IAEIVR G+ AV RGQ EA  +LGL+     
Sbjct: 152 NQGIRLLGLNLSVEFCAVLTGLVVFTGASIAEIVRGGINAVSRGQWEAFRSLGLSEGLGL 211

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE
Sbjct: 212 RRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIE 265


>gi|330809874|ref|YP_004354336.1| Amino-acid ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327377982|gb|AEA69332.1| Amino-acid ABC transporter, permease component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 236

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 92/230 (40%), Gaps = 8/230 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                  ++ + + ++   +T+   +      FV+ I LS+   R+S  F+ +       
Sbjct: 6   QEYWRSFVYSDGQQITGLAMTLWLLSASLFIGFVVSIPLSIA--RVSPRFYVRWPVQF-- 61

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T+L  G P  + + + Y   +    +     +  +          +A +  T A+ 
Sbjct: 62  ---YTYLFRGTPLYIQLLICYTGIYSLAAIRAQPVLD-AFFRDAMNCTILAFALNTCAYT 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI    +  +  G++EAA A GL+  K    V++P A+R  +P  +++ + +L ++++A
Sbjct: 118 TEIFAGAIRNIAHGEVEAAKAYGLSGWKLYAFVIMPSALRRSLPYYSNEVILMLHSTTVA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 D++ V     + T    +   +   IYL+++  +          
Sbjct: 178 FTATVPDILKVARDANSATFLTFQSFGVAALIYLAVTFTLVGLFRIAERH 227



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 35/106 (33%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T WL  + +    ++   +   R+S    V W  + Y  +FR  P  + +   Y
Sbjct: 20  ITGLAMTLWLLSASLFIGFVVSIPLSIARVSPRFYVRWPVQFYTYLFRGTPLYIQLLICY 79

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
             + S+  I    ++  F     N  +    L             +
Sbjct: 80  TGIYSLAAIRAQPVLDAFFRDAMNCTILAFALNTCAYTTEIFAGAI 125


>gi|283457667|ref|YP_003362252.1| amino acid ABC transporter permease [Rothia mucilaginosa DY-18]
 gi|283133667|dbj|BAI64432.1| ABC-type amino acid transport system, permease component [Rothia
           mucilaginosa DY-18]
          Length = 227

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 14/232 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +      L      ++      + SFV+G VL+L      R     + + +   Y+  
Sbjct: 8   GALLAKYDVLGAFMTNIELTFWAAIGSFVIGTVLALM-----RISPVPSLRWVGTAYVHL 62

Query: 227 FLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                L  L+ +A L     F       F+       +  F+   I LS Y AAFI E +
Sbjct: 63  VRNTPLTILMTLAILGVWTQFQLSFSHDFD-------TNFFVYAVIVLSIYHAAFICEAI 115

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP+GQ EAA A+GL      RLV+ PQA+R  I PL +  + L KN+++A    
Sbjct: 116 RSGVNTVPKGQAEAARAIGLGFFDTARLVIFPQALRGSITPLGNTLIALAKNTTVASVAS 175

Query: 346 FADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+   +  ++I       + I +I+   ++ + + I +     + K+A+K 
Sbjct: 176 VAEASGMMKSMIEFDANMVLAIFMIFAMGFVIIVVPIGVLTTWSSRKLAVKR 227



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L  F+    L F   I + +IGT++   R+S    + W+   YV + RN P  +++    
Sbjct: 17  LGAFMTNIELTFWAAIGSFVIGTVLALMRISPVPSLRWVGTAYVHLVRNTPLTILMTLAI 76

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             V +   +                 LS         A 
Sbjct: 77  LGVWTQFQLSFSHDFDTNFFVYAVIVLSIYHAAFICEAI 115


>gi|206577721|ref|YP_002238971.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935885|ref|YP_003439944.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290512971|ref|ZP_06552335.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|206566779|gb|ACI08555.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288890594|gb|ADC58912.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289774584|gb|EFD82588.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 239

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 6/199 (3%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ-FN 255
           G+   + A +LSRH   +   A       + +  G+P L++I L Y              
Sbjct: 36  GVGGVIAAAKLSRHAPARWFGA-----AWSVVFRGIPELLVIYLFYFGGSGMISWVGRLF 90

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
              G    P F+   +A+   ++++ AE+ R+  +A+  G++EAA A+G+   +  + +L
Sbjct: 91  GADGFIEVPPFLIGALAIGLISSSYQAEVYRAARLALMPGEVEAATAIGMPRWRILQRIL 150

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           LPQ +R  +P L++ +   LK+S+L    G  +L+         T       LI    YL
Sbjct: 151 LPQIIRYSLPGLSNVWQMSLKDSALVSVTGIVELMRASQIAAGSTRDYFLFYLIGGGCYL 210

Query: 376 SLSIMIALFMNRLNAKIAL 394
            L+++      R  + +  
Sbjct: 211 ILTLLSNRAFTRAESHLNR 229


>gi|116750586|ref|YP_847273.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116699650|gb|ABK18838.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 218

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 8/210 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS-TFLIFGL 232
             L      ++  A   V +F +  V                   +P +Y   T  +   
Sbjct: 1   MDLQVIARNLEFMAGGLVVTFEITAVALAGGLLWGILLGLGRLSRIPWIYYPVTVYVHFF 60

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            +  LI + +  +F  PV+              F+S  IA   + AA+ AEIVR G+ +V
Sbjct: 61  RSQPLILVIFWFYFLVPVMTGKPL-------GAFVSTLIAFVAFEAAYFAEIVRGGVQSV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ  A  + GL + +    ++LPQA+R+++P LT+Q + + +++SLA  +G  + +  
Sbjct: 114 SGGQAAAGYSCGLRYHQVQLYIILPQALRNMLPALTTQAVVIFQDTSLAYVIGLREFLRR 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
              +  +  ++IE+ L    +YL L  + +
Sbjct: 174 VNLVDTREARSIELYLFAGTVYLVLCFLGS 203


>gi|319940742|ref|ZP_08015083.1| polar amino acid ABC transporter [Sutterella wadsworthensis
           3_1_45B]
 gi|319805802|gb|EFW02576.1| polar amino acid ABC transporter [Sutterella wadsworthensis
           3_1_45B]
          Length = 366

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 94/264 (35%), Gaps = 15/264 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM-DTNAKIFVFSFVLG 197
           IP       +   +   +       +L  G   N   +             I +F     
Sbjct: 109 IPACWTRQGVRMLLWGWVAAFFAFFILMLGGVFNLEPIGTDMWGGLPLTVIITLFGMAAS 168

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
             L +    + R        AL   YI       L T VL    +      P   Q    
Sbjct: 169 SPLGILL-AIGRRSRMPIVSALSTGYIELVRGVPLIT-VLFVATFVFPLLLPEWLQ---- 222

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   F  + I ++ + AA++AE VR GL  + +GQ  AA +LG T R+  + V+LP
Sbjct: 223 -----CDAFWRVAIGIALFQAAYMAETVRGGLQTISQGQYAAARSLGFTERQCYQYVILP 277

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIY 374
           QA+ +IIP   +  L+   ++SL   V   DL       +         IE  +    +Y
Sbjct: 278 QALVAIIPAFVNSLLSCFMDTSLVTVVSMYDLTGSLKLALGDAVWRAYFIEGYVFIALVY 337

Query: 375 LSLSIMIALFMNRLNAKIALKEKK 398
              S +I+ +   L  ++   + +
Sbjct: 338 FISSFIISRYSQWLELRLKGAKAR 361


>gi|239928550|ref|ZP_04685503.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
 gi|291436875|ref|ZP_06576265.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
 gi|291339770|gb|EFE66726.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
          Length = 304

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 115/265 (43%), Gaps = 17/265 (6%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
               +  L+   F   +    L               +         T+   A     + 
Sbjct: 24  FLVVLAALLWWVFSTLNDKGQLEWFLWKPFFTSAEPWSTYIWPGLQNTLKAAALSVAIAL 83

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
            LG V  +   RLS H   +    + + +        +P LVL+     L  +       
Sbjct: 84  PLGAVFGIA--RLSDHAWIRVPAGIVVEF-----FRAIPVLVLMIFGLALFAE------- 129

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            +   S+      ++   L  Y A+ +AEIVR+G++++P+GQ E A+A+GL   +  RL+
Sbjct: 130 -YTNVSSDDRPLYAVVTGLVLYNASVLAEIVRAGILSLPKGQAEGAMAIGLRKNQVMRLI 188

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIWMF 372
           LLPQA+ +++P + SQ + ++K+++L    + F +L++   T+    G   I  + +   
Sbjct: 189 LLPQAVTAMLPAIVSQLVVIVKDTALGGAVLTFPELLASANTMSGYYGANVIASLTVVSV 248

Query: 373 IYLSLSIMIALFMNRLNAKIALKEK 397
           ++++L+  +  F + L A++   ++
Sbjct: 249 LFIALNFALTSFASWLEARLRRSKR 273



 Score = 66.9 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 21/156 (13%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N+    +  ++L  +  W  + + +  +         FL +    
Sbjct: 2   SSVLYDAQGPRAKRRNVVFTAVFLVVLAALLWWVFSTLNDKGQLE------WFLWKPF-- 53

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
                   +TS   ++T I  G  NT   A   +  A  +G + G  RLS +  +     
Sbjct: 54  --------FTSAEPWSTYIWPGLQNTLKAAALSVAIALPLGAVFGIARLSDHAWIRVPAG 105

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           + VE FR IP LV++ F          +      L 
Sbjct: 106 IVVEFFRAIPVLVLMIFGLALFAEYTNVSSDDRPLY 141


>gi|15900609|ref|NP_345213.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|111658698|ref|ZP_01409341.1| hypothetical protein SpneT_02000206 [Streptococcus pneumoniae
           TIGR4]
 gi|14972185|gb|AAK74853.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|301793879|emb|CBW36274.1| putative amino-acid ABC transporter integral membrane protein
           [Streptococcus pneumoniae INV104]
          Length = 206

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 18/211 (8%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y
Sbjct: 1   MHIAVWGILGSFLLGLIVSII-----RHYRILVLAQVATAYIE--LSRNTPLLIQLFFLY 53

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F       V    +   + L     +++AE  RSGL A+ + Q E  +A
Sbjct: 54  -----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLEAISQTQQEIGLA 102

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GLT  +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    +
Sbjct: 103 IGLTPLQVFYYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYE 162

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               + + +  YL + + I+L  + +  ++ 
Sbjct: 163 TDIALAMLVVAYLIMLLPISLVFSWIERRLR 193



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 38/91 (41%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ + ++G +V   R     ++A +   Y+E+ RN P L+ +FFLY  +  +  +
Sbjct: 3   IAVWGILGSFLLGLIVSIIRHYRILVLAQVATAYIELSRNTPLLIQLFFLYFGLPRIGIV 62

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
               +    G+          +      A  
Sbjct: 63  LSSEVCATLGLVFLGGSYMAESFRSGLEAIS 93


>gi|268319379|ref|YP_003293035.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
 gi|262397754|emb|CAX66768.1| ABC transporter permease component [Lactobacillus johnsonii FI9785]
          Length = 225

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T+  I V S ++G+ L      L R    +  K +  +Y+  F +  +PT+VL+ L Y 
Sbjct: 23  WTSVWIAVLSLIIGLALGALFGVL-RTSKSRLVKVIFRIYLEFFRM--VPTVVLLFLFYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +  QFN        P  +   IA + + +A  ++IVR  LI+VP+ Q E+ +AL
Sbjct: 80  I-----LPRQFNL-----NWPASVMAVIAFALWVSAEFSDIVRGALISVPKIQRESGLAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    VLLPQA +  +P   +    ++K +SL + +   D+++VG  I+    Q 
Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189

Query: 364 -----IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +  F+Y  +   ++L+  RL+ +
Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   + W+A   +I    +G L G  R S ++LV  I R+Y+E FR +P +V++F  
Sbjct: 18  LLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRMVPTVVLLFLF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   + V+    F   
Sbjct: 78  YYILPRQFNLNWPASVMAVIAFALW 102


>gi|209547541|ref|YP_002279459.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538785|gb|ACI58719.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 223

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 87/226 (38%), Gaps = 14/226 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      +        +    ++     VLGI L +      R       K +   
Sbjct: 1   MSYHFEFGWLLQYYPEIIKGILVTLELIAIGGVLGISLGIV-CAWVRALGPAWLKPVVAS 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+           +             +             PE  +  +A+     A+  
Sbjct: 60  YVELIRNTPFLIQLFFIFFGLPSLGLQL-------------PELTAANLAMVINLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I P L+SQ + ++  SS+  
Sbjct: 107 EIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            +   DL      I ++T +A E  ++   IYL ++I++   +  +
Sbjct: 167 QIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVMAILLRQVLGVI 212


>gi|324997391|ref|ZP_08118503.1| amino acid ABC transporter membrane protein [Pseudonocardia sp. P1]
          Length = 215

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 9/224 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L              V  FV+  + SL    L          AL     +   +   
Sbjct: 1   MDVLLDNIDVYWRGLVGTVGLFVIAAIGSLLLGTLVAGLRVSPVPALRSFGSAYVTVMRN 60

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             L L+   +   + +  L +  F         F    I L+ YTAAF+ E+VRSG+  V
Sbjct: 61  TPLTLVLFFFAFAYPRLELVELPF---------FALACIGLTLYTAAFVCEVVRSGINTV 111

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA ALG T  +    V+LPQA+R+++PP+T+  + LLKN+++A      ++ +V
Sbjct: 112 PVGQAEAARALGFTFTQTLGQVVLPQAVRAVVPPMTNVQIALLKNTTIASGFAVFNMGNV 171

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +  +    +  +L     ++ L   + L   RL+A+  +  
Sbjct: 172 YSVLSERGYNVLVGLLWVALFFIILVAPLTLLQRRLDARWGVAR 215



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 29/69 (42%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
                G V T  L     I + ++GTLV   R+S    +      YV V RN P  +V+F
Sbjct: 9   DVYWRGLVGTVGLFVIAAIGSLLLGTLVAGLRVSPVPALRSFGSAYVTVMRNTPLTLVLF 68

Query: 147 FLYKSVLSV 155
           F   +   +
Sbjct: 69  FFAFAYPRL 77


>gi|324991488|gb|EGC23421.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK353]
          Length = 219

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S + G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTIFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 PGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAVIYFLINFAISSFSRKLSQRWA 215



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P 
Sbjct: 9   TATNLLFILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPN 68

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 69  LLWIFTIFLVF 79


>gi|145633093|ref|ZP_01788825.1| arginine ABC transporter permease protein [Haemophilus influenzae
           3655]
 gi|144986319|gb|EDJ92898.1| arginine ABC transporter permease protein [Haemophilus influenzae
           3655]
          Length = 227

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K  K+   LY++ F   G P LV   L Y            +      +S  +    +A
Sbjct: 42  NKWIKSAVNLYLTLFT--GTPLLVQFFLIYAGP--GQFQWIIDSPLWYVLSNAWFCAALA 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+  +AA+  ++    + A+P+GQ E+  ALGL   +    +L+P A++  +P  +++ +
Sbjct: 98  LALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTL-KILIPYALKRALPSYSNEII 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + K ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+
Sbjct: 157 LVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216

Query: 393 ALKEK 397
              E+
Sbjct: 217 LAFER 221


>gi|167570000|ref|ZP_02362874.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia oklahomensis C6786]
          Length = 241

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 2/176 (1%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PL+    F  FG+ +L+   +   L  +         +     S EF++ ++ LSC
Sbjct: 60  FRNTPLVVQLLFWYFGVASLLPEPVMTWL--NARHAIAVGGVELHWPSFEFVAGWVGLSC 117

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YT+AF+AE   +GL  VP GQ  AA ALGL   +  R V+LPQA+R  +PPL  QY+NL+
Sbjct: 118 YTSAFVAEEFHAGLRGVPAGQYHAASALGLAPLQTLRFVVLPQAVRIALPPLFGQYMNLI 177

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           KNSSL +A+G A+L      +  +T +      +   +Y++   ++         +
Sbjct: 178 KNSSLTMAIGVAELSYASRQVETETFRTFAAFGVSTVLYIAAVAVVEALAQWTVRR 233



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 34/79 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L+ +  + AT  G  +   R +           YV  FRN P +V 
Sbjct: 9   YLMWLWQGFLLTLGLSLAAAVAATFAGFALAIARHAKRAWPRRAAAAYVVAFRNTPLVVQ 68

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           + F Y  V S+LP P  + 
Sbjct: 69  LLFWYFGVASLLPEPVMTW 87


>gi|158424111|ref|YP_001525403.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331000|dbj|BAF88485.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 221

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+     +     V G++++L +   SR       + L   +I          L
Sbjct: 22  LQGLGMTLMVCCAVIPLGLVGGLIVALGSRARSRL-----ARGLLAGFIDVLRALPPLVL 76

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            LIA+   L F    L              F  + +AL   T+A+  E+ R+GL +V  G
Sbjct: 77  -LIAISAGLPFAGIRL------------SPFACVTLALFLNTSAYYGEVYRAGLDSVSHG 123

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA   GL+  +A   V++PQA+R+++P L S  + ++K +SLA  V   +++     
Sbjct: 124 QWEAARCTGLSASQAMFYVIIPQAVRNVLPDLVSNTVEVVKLTSLASVVALPEMLYSADM 183

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             + T  +  I+L  +   L+L   +   M+RL  ++ 
Sbjct: 184 ARSLTFNSSPIMLAALIY-LALLWPVVRLMSRLEHRLG 220



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 37/98 (37%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +  + +    + G +V  G  + ++L   +   +++V R +PPLV++  + 
Sbjct: 22  LQGLGMTLMVCCAVIPLGLVGGLIVALGSRARSRLARGLLAGFIDVLRALPPLVLLIAIS 81

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             +            +   +FLN             ++
Sbjct: 82  AGLPFAGIRLSPFACVTLALFLNTSAYYGEVYRAGLDS 119


>gi|149201667|ref|ZP_01878641.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144715|gb|EDM32744.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 247

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 8/215 (3%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            +T+  +      S V+G++ +      SR      G  +             P LV + 
Sbjct: 36  WMTIKLSVVSIFLSLVVGVLGAAVQGAPSRTLRVAVGLFVA-------FFRNTPPLVQLY 88

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             Y        +   N +    +   F    I+LS +  A   EI R+G+ AVPR  +EA
Sbjct: 89  FFYFAIGTVLRITGENGLPQPLI-SNFGWAIISLSLFAGALNVEIFRAGVEAVPRSTVEA 147

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A ALG T  +    ++LP A+R  +P L +  +NL+K ++LA A+   +L+ V   I ++
Sbjct: 148 AEALGYTRLQIYTDIVLPLAVRVSLPALGTNLVNLVKTTTLAYAIAVPELLYVSAQIWSE 207

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                E++ + +  Y+ L  ++   ++R    + +
Sbjct: 208 DLNVREMMNVLLVSYVGLVAILVWVLHRWEKALRI 242



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 82  DSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              Y     + G   T  L+   +  + ++G L  A + + ++ +     ++V  FRN P
Sbjct: 23  SDDYNRGRYVSGLWMTIKLSVVSIFLSLVVGVLGAAVQGAPSRTLRVAVGLFVAFFRNTP 82

Query: 141 PLVVIFFLYKSV 152
           PLV ++F Y ++
Sbjct: 83  PLVQLYFFYFAI 94


>gi|145639303|ref|ZP_01794909.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittII]
 gi|145271606|gb|EDK11517.1| arginine ABC transporter permease protein [Haemophilus influenzae
           PittII]
 gi|301169916|emb|CBW29520.1| arginine transporter subunit [Haemophilus influenzae 10810]
 gi|309751179|gb|ADO81163.1| Arginine ABC transporter, permease protein ArtM [Haemophilus
           influenzae R2866]
          Length = 227

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K  K+   LY++ F   G P LV   L Y            +      +S  +    +A
Sbjct: 42  NKWIKSAVNLYLTLFT--GTPLLVQFFLIYAGP--GQFQWIIDSPLWYVLSNAWFCAALA 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+  +AA+  ++    + A+P+GQ E+  ALGL   +    +L+P A++  +P  +++ +
Sbjct: 98  LALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTL-KILIPYALKRALPSYSNEII 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + K ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+
Sbjct: 157 LVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216

Query: 393 ALKEK 397
              E+
Sbjct: 217 LAFER 221


>gi|291301452|ref|YP_003512730.1| polar amino acid ABC transporter inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
 gi|290570672|gb|ADD43637.1| polar amino acid ABC transporter, inner membrane subunit
           [Stackebrandtia nassauensis DSM 44728]
          Length = 220

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 19/216 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                 F  + V+G +L+L     +        +     Y   F    L           
Sbjct: 21  WLTLASFALALVIGGILALMHVSPA-----PPARWAATAYTQFFRNIPLLV--------- 66

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L  F  +G       ++   I L  YT A + E +RSG+ ++  GQ EAA ++
Sbjct: 67  --ILVLFLFGFTALGIGKGMASWIWAIIGLGTYTGALVGETLRSGINSISLGQAEAARSI 124

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  ++   V+LPQA R+++PPL S ++ L+KNS+LA AVG  +L  V   +      +
Sbjct: 125 GLTFGQSLSSVILPQAFRTVVPPLGSLFIALVKNSALASAVGIIELSGVADQLQEDRNVS 184

Query: 364 IEIILI---WMFIYLSLSIMIALFMNRLNAKIALKE 396
           + I  I    +  YL +++  +  +     + A+  
Sbjct: 185 VSIWTIVIGVILFYLIINLPASYLIRVAEKRAAISR 220



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +       +  GFV T WL  +    A +IG ++    +S      W    Y + FRN
Sbjct: 2   FQNLDYVLPILAQGFVTTLWLTLASFALALVIGGILALMHVSPAPPARWAATAYTQFFRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           IP LV++        ++      +  + 
Sbjct: 62  IPLLVILVLFLFGFTALGIGKGMASWIW 89


>gi|77462293|ref|YP_351797.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Rhodobacter sphaeroides 2.4.1]
 gi|77386711|gb|ABA77896.1| ABC glutamate/glutamine/aspartate/asparagine transporter, inner
           membrane subunit BztC [Rhodobacter sphaeroides 2.4.1]
          Length = 442

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/279 (24%), Positives = 117/279 (41%), Gaps = 19/279 (6%)

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +L A    +       + P++   FL   V   L          +   + +       L 
Sbjct: 179 RLAARFGTIAAVAAAALVPVLWWLFLAGDVSDDLARLTGRSFPLWLEEVRSDKFGGFVLA 238

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +         S  LGI+L+L      R       KAL + +I       L  L+  A   
Sbjct: 239 VTIGVSGIALSLPLGIILAL-----GRRSDMFLIKALSVSFIEFIRGVPLIALLFTASLL 293

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
             +F  P           T     + + I ++ + AA+IAE++R GL A+PRGQ EAA A
Sbjct: 294 LNYFLPP----------GTTFDIILRVIIMVTLFAAAYIAEVIRGGLAALPRGQYEAADA 343

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-LVSVGGTIINQT- 360
           LGL + KA RL++LPQA++  IP + S ++ + K+++L V VG  D L  +   +   T 
Sbjct: 344 LGLDYWKAQRLIILPQALKISIPGIVSTFIGMFKDTTLVVFVGLLDPLKGITDAVRASTD 403

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G   E  +    I+ + +  ++ +   L  ++    +
Sbjct: 404 WKGIYWEPYIFVGLIFFAFNFAMSRYSMHLERRLKTDHR 442



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 33/74 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GFV    +  SG+  +  +G ++  GR S   L+  +   ++E  R +P + ++F     
Sbjct: 234 GFVLAVTIGVSGIALSLPLGIILALGRRSDMFLIKALSVSFIEFIRGVPLIALLFTASLL 293

Query: 152 VLSVLPIPDHSIVL 165
           +   LP      ++
Sbjct: 294 LNYFLPPGTTFDII 307


>gi|195973407|gb|ACG63350.1| allantoate transport membrane protein [Klebsiella oxytoca M5al]
          Length = 221

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 14/213 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                     +    ++ V + + G+ + +F          ++G+      I    +  +
Sbjct: 11  WPHWPELLAGLWVTIQLTVLATIGGLTIGIFGAA------VRSGRPTWFSRIWGGYVELI 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                +   + + F  P LG     G         +  +A+     A+  EIVR+G+   
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKMTAGE--------AALLAMVVNLGAYSTEIVRAGIQVT 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+GQ EA   LGLT  +    V+LP A++ I P L SQ + ++  SS+   V +  L   
Sbjct: 117 PKGQWEAGRVLGLTRTQTFIQVILPPALQRIYPALVSQCIIVMLGSSVGCQVSYEKLTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              I ++T  + E+ L+   IYL+LSI +   +
Sbjct: 177 AHLIQSRTFLSFEVYLVTTGIYLALSITMRQLL 209



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 35/96 (36%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    +   +L G   T  L     I    IG    A R       + I   YVE+ 
Sbjct: 5   LHFSELWPHWPELLAGLWVTIQLTVLATIGGLTIGIFGAAVRSGRPTWFSRIWGGYVELI 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           RN P +V +FF+   + ++             M +N
Sbjct: 65  RNTPFVVQLFFIVFGLPNLGLKMTAGEAALLAMVVN 100


>gi|170749709|ref|YP_001755969.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
 gi|170656231|gb|ACB25286.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium radiotolerans JCM 2831]
          Length = 283

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 80/229 (34%), Gaps = 16/229 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                L+     +  +        V GI L L      R           L + +T +  
Sbjct: 67  WAPLLLTGFAFNVAISLMAMAIGTVAGIGLGLAMLAEGRILPR-------LAWCATQVFR 119

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            +P LVL+     L     V  Q    G     P+++      S    A +AEIVR  + 
Sbjct: 120 NVPWLVLLFFVMFL-----VPFQVTVFGVRVPLPDWVKATFGFSLPVMANVAEIVRGAVR 174

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-L 349
           +VP  Q EAA +L  T R+    ++LPQ  + ++PP  + Y  +   +  A  VG  + L
Sbjct: 175 SVPNTQWEAAESLAFTRRQTLWRIILPQCAKRMLPPWMNVYSLIAMATVQASIVGVTEML 234

Query: 350 VSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                    + G+      +    +  +      I  F   L  +   +
Sbjct: 235 TLTAQVHAAEGGRPELFAPLYGFALLCFFLYCYPIDRFTAALERRFETR 283



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 41/85 (48%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +A  +L GF     ++   M   T+ G  +G   L+  +++  +     +VFRN+P LV+
Sbjct: 67  WAPLLLTGFAFNVAISLMAMAIGTVAGIGLGLAMLAEGRILPRLAWCATQVFRNVPWLVL 126

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +FF+   V   + +    + LP  +
Sbjct: 127 LFFVMFLVPFQVTVFGVRVPLPDWV 151


>gi|330821514|ref|YP_004350376.1| asparagine transport system permease protein [Burkholderia gladioli
           BSR3]
 gi|327373509|gb|AEA64864.1| asparagine transport system permease protein [Burkholderia gladioli
           BSR3]
          Length = 220

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 14/206 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A++ V    LGIV    A    R    +  +AL L Y+          LV ++     
Sbjct: 21  VTAQVCVLGIPLGIVAGTLA-AYCRAMPSRLLRALSLAYVEIVRNVPFLILVYLSF---- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P F     A + YT  +  EI+R+ L ++  GQ++AA +LG
Sbjct: 76  ---------FGLPKLGLRVPAFAIGVAATAFYTGGYFCEILRAALASLSHGQVQAARSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   +  R V+LPQ    + P  TS  + + K+SS+   +  A++      +   T   +
Sbjct: 127 LNAFQVQRHVVLPQIFGFLAPATTSLTIMMFKDSSIFSVMSLAEMTYQSNLLTADTFAYV 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
           E++     IY S S+++ +       
Sbjct: 187 EVLGTTALIYWSCSVLLDIAGQWAER 212



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 33/67 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +   G+    + GTL    R   ++L+  +   YVE+ RN+P L++++  
Sbjct: 15  LLEGLKVTAQVCVLGIPLGIVAGTLAAYCRAMPSRLLRALSLAYVEIVRNVPFLILVYLS 74

Query: 149 YKSVLSV 155
           +  +  +
Sbjct: 75  FFGLPKL 81


>gi|126461169|ref|YP_001042283.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|221638147|ref|YP_002524409.1| Polar amino acid ABC transporter inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|126102833|gb|ABN75511.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|221158928|gb|ACL99907.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 442

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 69/279 (24%), Positives = 117/279 (41%), Gaps = 19/279 (6%)

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +L A    +       + P++   FL   V   L          +   + +       L 
Sbjct: 179 RLAARFGTIAAVAAAALVPVLWWLFLAGDVSDDLARLTGRTFPLWLEEVRSDKFGGFVLA 238

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           +         S  LGI+L+L      R       KAL + +I       L  L+  A   
Sbjct: 239 VTIGVSGIALSLPLGIILAL-----GRRSDMFLIKALSVSFIEFIRGVPLIALLFTASLL 293

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
             +F  P           T     + + I ++ + AA+IAE++R GL A+PRGQ EAA A
Sbjct: 294 LNYFLPP----------GTTFDIILRVIIMVTLFAAAYIAEVIRGGLAALPRGQYEAADA 343

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-LVSVGGTIINQT- 360
           LGL + KA RL++LPQA++  IP + S ++ + K+++L V VG  D L  +   +   T 
Sbjct: 344 LGLDYWKAQRLIILPQALKISIPGIVSTFIGMFKDTTLVVFVGLLDPLKGITDAVRASTD 403

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G   E  +    I+ + +  ++ +   L  ++    +
Sbjct: 404 WKGIYWEPYIFVGLIFFAFNFAMSRYSMHLERRLKTDHR 442



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 33/74 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GFV    +  SG+  +  +G ++  GR S   L+  +   ++E  R +P + ++F     
Sbjct: 234 GFVLAVTIGVSGIALSLPLGIILALGRRSDMFLIKALSVSFIEFIRGVPLIALLFTASLL 293

Query: 152 VLSVLPIPDHSIVL 165
           +   LP      ++
Sbjct: 294 LNYFLPPGTTFDII 307


>gi|322385753|ref|ZP_08059397.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
 gi|321270491|gb|EFX53407.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus cristatus ATCC 51100]
          Length = 213

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS    T+   A + VFS  LGI+L+       +           LL+I  +++ G P L
Sbjct: 12  LSGAATTLQVFALVLVFSIPLGIMLAFSMQIRLKPLQW-------LLHIYIWIMRGTPLL 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +   Y +                       +  IA +   AA+ AEI R G+ ++P G
Sbjct: 65  LQLIFIYYV-----------LPSLGIRLDRIPAAIIAFTLNYAAYFAEIFRGGISSIPTG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  L  T  +  RL++LPQ ++ ++P + ++ + L+K++SL  A+G +DL+    T
Sbjct: 114 QYEAAKVLKFTPVQTIRLIILPQVVKIVLPSVFNEVMTLVKDTSLVYALGISDLILASRT 173

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             N+      +  +   IYL L  +  L   ++  K +
Sbjct: 174 AANRDASLAPMF-VAGLIYLLLIGLATLVAKQVEKKFS 210



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +    ++ +  +G ++        K + W+  +Y+ + R  P L+ + F+
Sbjct: 11  LLSGAATTLQVFALVLVFSIPLGIMLAFSMQIRLKPLQWLLHIYIWIMRGTPLLLQLIFI 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S+    D          LN 
Sbjct: 71  YYVLPSLGIRLDRIPAAIIAFTLNY 95


>gi|119387584|ref|YP_918618.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378159|gb|ABL72922.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 217

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 13/228 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L      F          + + S + G VL +    +   +      A PL+++ 
Sbjct: 1   MFDTALTTADFVFLAKGAGMTIVVTIISVIAGTVLGIVFGVI--RYQLGAIWAAPLIFV- 57

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +   +P L+ + L             F           F    I LS YTAA+ AEIV
Sbjct: 58  LDIFRSIPLLIQLVLA----------NAFMGTILRLNMSGFTVACIVLSMYTAAYCAEIV 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVP     AA +LG++  +  R ++LP A R  +P      L ++K+S+L   V 
Sbjct: 108 RGGIEAVPATTRRAARSLGMSWGQDMREIVLPLATRVALPSWIGLALGVMKDSALVYVVQ 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L+     +I +  + + +++I    Y  +S  +A F   L  + +
Sbjct: 168 VTELLRSTQILITRLQEPLLLLMICGAFYFVISFPLARFGGYLEKRWS 215


>gi|92112290|ref|YP_572218.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795380|gb|ABE57519.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 213

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 82/221 (37%), Gaps = 14/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N            T   I   S  +G+V  L    L R         L +LYIS     
Sbjct: 1   MNASAWQMLLEGAWTTVWISAVSIAIGVVAGLVI-ALIRLARIPIVDQLLVLYISVARAT 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L TL L            +                ++  +AL+  T AF AEI RS   
Sbjct: 60  PLVTLALFIFLSAPDLGLDLNRS-------------VAGILALTLNTTAFNAEIWRSAFR 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
              R Q EAA+A G+T     R ++LPQ + + +P L ++   L+K S     +G  DL 
Sbjct: 107 NFSRDQREAAMATGMTPWITFRRIMLPQMVITSLPGLVNEMSFLIKGSPAIAVIGIVDLT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            V   I   T + +  IL+   +Y+ +   +         +
Sbjct: 167 RVTNRISAVTYEPLPPILVAGALYMMVIGCLVWLQRIFERR 207



 Score = 38.0 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 38/97 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T W++   +    + G ++   RL+   +V  +  +Y+ V R  P + + 
Sbjct: 6   WQMLLEGAWTTVWISAVSIAIGVVAGLVIALIRLARIPIVDQLLVLYISVARATPLVTLA 65

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
            F++ S   +    + S+     + LN    +     
Sbjct: 66  LFIFLSAPDLGLDLNRSVAGILALTLNTTAFNAEIWR 102


>gi|329939957|ref|ZP_08289239.1| glutamate uptake system protein [Streptomyces griseoaurantiacus
           M045]
 gi|329300783|gb|EGG44679.1| glutamate uptake system protein [Streptomyces griseoaurantiacus
           M045]
          Length = 228

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 21/242 (8%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEK 214
            +  + F        L+   +T+       + S V G +L+          R    F+  
Sbjct: 2   EAREIVFDFLEGYDVLAAFWVTVKLTFFSAIGSLVWGTLLAGMRVSPVPLMRGFGTFYVN 61

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           T + +PL  I  F   GL  +  + L     F                   F    + LS
Sbjct: 62  TVRNIPLTVIIVFSSLGLADVFGMTLGASNDFKAL---------------SFRLSILGLS 106

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            YTAAF+ E +RSG+  VP GQ EAA ALGL+  +  R+++LPQA R+ I PL +  + L
Sbjct: 107 AYTAAFVCEALRSGINTVPMGQAEAARALGLSFTQVLRMIVLPQAFRAAIVPLANVLIAL 166

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            KN+++A A+G  +   +   +I      + I  I+   ++ L++ + L +  L  ++A+
Sbjct: 167 TKNTTVAAAIGVGEAALLMKEMIENEAATVLIAFIFALGFVVLTLPMGLILGWLGKRLAV 226

Query: 395 KE 396
           K 
Sbjct: 227 KR 228



 Score = 43.4 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 30/69 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L  F  T  L F   I + + GTL+   R+S   L+      YV   RNIP  V+I F  
Sbjct: 17  LAAFWVTVKLTFFSAIGSLVWGTLLAGMRVSPVPLMRGFGTFYVNTVRNIPLTVIIVFSS 76

Query: 150 KSVLSVLPI 158
             +  V  +
Sbjct: 77  LGLADVFGM 85


>gi|325696133|gb|EGD38024.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 219

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S + G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTIFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 PGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSRKLSQRWA 215



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|225853390|ref|YP_002733623.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis ATCC 23457]
 gi|265993715|ref|ZP_06106272.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis bv. 3 str. Ether]
 gi|265999280|ref|ZP_05465661.2| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis bv. 2 str. 63/9]
 gi|225641755|gb|ACO01669.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis ATCC 23457]
 gi|262764696|gb|EEZ10617.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis bv. 3 str. Ether]
 gi|263093031|gb|EEZ17181.1| his/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           melitensis bv. 2 str. 63/9]
          Length = 232

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 14/233 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            + F +             + TN  I + + +L ++     T L R        A+  + 
Sbjct: 13  TMDFSVSALGGAFPQLLPAIGTNLVISIIAMILALIGGTALTIL-RTLGIAPLNAVIGVV 71

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           IS   I G P LV I L Y   +  P L                +  +A++  ++ FI E
Sbjct: 72  ISF--IRGTPILVQIFLFY---YGLPAL--------GLDLSPIQAGILAIAFNSSIFITE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R GL  +  G +EAAIALG+  +     V+LPQ    I+PPL ++    +K ++L   
Sbjct: 119 IMRGGLSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSV 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 179 ITVVEVLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 231


>gi|88855457|ref|ZP_01130121.1| glutamate permease [marine actinobacterium PHSC20C1]
 gi|88815364|gb|EAR25222.1| glutamate permease [marine actinobacterium PHSC20C1]
          Length = 309

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 25/206 (12%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
              + + V+GI+ S   T  S+     T                        +  +L   
Sbjct: 86  AAAILAIVVGILFSFGRTAASKWIRIPTS-----------------------ILLELFRG 122

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+L    F+     +  + +  I L+ Y  A I E +R+G+ ++P+GQ E  +++GLT 
Sbjct: 123 MPLLLLILFVFLLFSTGSYWAGVIGLAVYNGAIIGEALRAGISSLPKGQREGGLSVGLTS 182

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--QAIE 365
            +   ++  PQA R ++P + +Q + LLK++SLA  V + +L      + N  G      
Sbjct: 183 LQTRFIIEFPQAFRQMLPIILAQLVVLLKDTSLAYVVSYPELARTIKNLQNFYGSRYLFT 242

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
           +  +   IYL +++ ++        +
Sbjct: 243 LFAVGFVIYLVMNLTLSYIARYAAKR 268



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 13/130 (10%)

Query: 16  MKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
           M  LYD      R ++    +I A+ +     W    +      +N +       +   F
Sbjct: 3   MSVLYDAPGPKTRRNSTIASVISAVAILAGLTWVFFTLAAPRVNANGA------EQPGMF 56

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +     +   SD     A   G  +T  +A +  I A ++G L   GR +A+K +     
Sbjct: 57  D--PSRLDILSDPEVWGAFGGGVADTLRMAGAAAILAIVVGILFSFGRTAASKWIRIPTS 114

Query: 131 VYVEVFRNIP 140
           + +E+FR +P
Sbjct: 115 ILLELFRGMP 124


>gi|126464335|ref|YP_001045448.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|126106146|gb|ABN78676.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 370

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 119/291 (40%), Gaps = 20/291 (6%)

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            L G      +  +  +  VY+        L +    +     V      S+ +   MF 
Sbjct: 93  MLFGLYPYDEHWRLVLMMAVYLGTV----VLSLWPRCWNLRFLVPLWIVSSLSIGILMFG 148

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFL 228
              GL +   +      + +  F   +++ +       L R       + + +++I    
Sbjct: 149 GVLGLRYVPTSEWGGLPLTMLLFTGTVLIGMPVAVLLALGRRAPLPVARGVSVVFIEALR 208

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              L T++ +A          V     F+       + + + + ++ + A + AE++R G
Sbjct: 209 GVPLITILFVA----------VNVFPLFLPAGVEVNKLLRITVGIAIFFACYQAEVIRGG 258

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+P GQ EAA +L L++ + TR ++LPQA+R  +P +T+  +  +KN+S  + +G  D
Sbjct: 259 LQAIPTGQYEAAASLSLSYWQTTRRIILPQALRISLPAITNHIIAAMKNTSFVIIIGLFD 318

Query: 349 LVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++    ++         IE  L    +YL     ++L+  ++   IA   
Sbjct: 319 ILTATTAVMQDPLWRKFYIEAYLFVAAVYLFFGYALSLYARQVEKWIASGR 369


>gi|171780125|ref|ZP_02921029.1| hypothetical protein STRINF_01913 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281473|gb|EDT46908.1| hypothetical protein STRINF_01913 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 215

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 27/222 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S ++G VL++      R+        +  +YI         
Sbjct: 11  FILQGLWLTIYISFISIVLSTLIGTVLAVM-----RNGKNPVLHLISSIYIEFVR----- 60

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                        + P L     I          +   A + +T+A +AEI+R GL  V 
Sbjct: 61  -------------NVPNLLWIFIIFLVFQMKSTPAGITAFTVFTSAALAEIIRGGLNGVD 107

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA +A G+T+ +    ++ PQA R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 108 HGQTEAGLAQGMTNFQIFIYIVFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQELFGK 167

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++ +     Q   +  +   IY  ++  I+    RL  K
Sbjct: 168 SQILMGRYFEASQVFTLYALIAAIYFVINFSISTISRRLAKK 209



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 39/71 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  + IL G   T +++F  ++ +T+IGT++   R   N ++  I  +Y+E  RN+P 
Sbjct: 5   TPTNLSFILQGLWLTIYISFISIVLSTLIGTVLAVMRNGKNPVLHLISSIYIEFVRNVPN 64

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 65  LLWIFIIFLVF 75


>gi|149020351|ref|ZP_01835243.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|147930653|gb|EDK81635.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
          Length = 226

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 18/208 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF+LG+++S+      RH+       +   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLLGLIVSII-----RHYRIPVLAQVATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL  + + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATLGLVFLGGSYMAESFRSGLETISQTQQEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTPLQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              + + +  YL + + I+L  + +  +
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERR 211



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 42/95 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     ++A +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLLGLIVSIIRHYRIPVLAQVATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
           RN P L+ +FFLY  +  +  +    +    G+  
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATLGLVF 95


>gi|125718376|ref|YP_001035509.1| ABC transporter membrane-spanning permease, arginine/histidine
           transport, putative [Streptococcus sanguinis SK36]
 gi|323351207|ref|ZP_08086863.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
 gi|125498293|gb|ABN44959.1| ABC transporter membrane-spanning permease, arginine/histidine
           transport, putative [Streptococcus sanguinis SK36]
 gi|322122431|gb|EFX94142.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis VMC66]
          Length = 219

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S + G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTIFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 PGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSRKLSQRWA 215



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P 
Sbjct: 9   TTTNLLFILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPN 68

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 69  LLWIFTIFLVF 79


>gi|330939242|gb|EGH42645.1| amino acid ABC transporter permease [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 225

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    +  +    +Y+   ++ G+  LVL+   + L F  P+                 +
Sbjct: 47  RLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIRLSPMTT 93

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  +IPP+ 
Sbjct: 94  GVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRQIILPQALPFMIPPMG 153

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++  + R 
Sbjct: 154 NQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLSWLVKRY 213

Query: 389 NAK 391
              
Sbjct: 214 EQH 216



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  +     +   ++  L+   RLS  + + W   VYVEV R I  LV+
Sbjct: 14  IARQLATGAWITLQITVLAELLVLVLSLLIALMRLSPFRALRWFATVYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|331267078|ref|YP_004326708.1| ABC transporter, membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
 gi|326683750|emb|CBZ01368.1| ABC transporter, membrane-spanning permease-amino acid transport
           [Streptococcus oralis Uo5]
          Length = 230

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            IF L     I L + + +  P   ++          + + + + +    AA +AE+ ++
Sbjct: 59  YIFTLRCTPPIVLLFLVFYGLPEFLKWWLGLDINNWSKTIFVLLTMILLFAAIVAEVFKA 118

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
              A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++++LA  +GF 
Sbjct: 119 AYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRDAALAYTIGFV 178

Query: 348 DLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           D++  G  +I++     ++E       +Y  ++++I+     L   +  K +
Sbjct: 179 DVMGAGNLLISRNLGNYSLETYTAVALLYWGIALVISSLSRLLEKSLETKGR 230


>gi|237740703|ref|ZP_04571184.1| amino acid ABC transporter [Fusobacterium sp. 2_1_31]
 gi|229422720|gb|EEO37767.1| amino acid ABC transporter [Fusobacterium sp. 2_1_31]
          Length = 240

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 109/245 (44%), Gaps = 18/245 (7%)

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
              +++ +   D  +   F        ++   LT+       V S ++GI+ S       
Sbjct: 8   GIILINSIKNGDRKMDWEFIAKYTPEFINAGILTLKIGGIGIVLSIIVGILGSWILYE-- 65

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              + K  K + + Y+   L    P LV +   + L+F  P +       G  +SPE   
Sbjct: 66  ---NFKFFKQIVIGYVE--LSRNTPLLVQL---FFLYFGLPKV-------GLRLSPEL-C 109

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L+    +++ E  RS L  + + Q E+A++LG+T+ +  R V+LPQ+    +P LT
Sbjct: 110 GIIGLTFLGGSYMIETFRSALETIDKIQKESALSLGMTNWQTMRYVILPQSFVISLPGLT 169

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  + +LK +S+  A+   D++ V   +I    +  E + + +  YL + + ++L    L
Sbjct: 170 ANIIFMLKETSVFSAISLMDMMFVTKDLIGLYYKTEESLFMLVVGYLIILLPLSLLGVWL 229

Query: 389 NAKIA 393
             K+ 
Sbjct: 230 ERKLK 234



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    +   + T  +   G++ + I+G L         K    I   YVE+ RN P LV 
Sbjct: 30  YTPEFINAGILTLKIGGIGIVLSIIVGILGSWILYENFKFFKQIVIGYVELSRNTPLLVQ 89

Query: 145 IFFLYKSVLSV 155
           +FFLY  +  V
Sbjct: 90  LFFLYFGLPKV 100


>gi|222082455|ref|YP_002541820.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727134|gb|ACM30223.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 222

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 12/229 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTF 227
           M  +   L      + + A + +  ++LG + +     L     +  G  L   L     
Sbjct: 1   MSFDINVLLDQWPAIVSGAGVTIMIWILGTIAAAIIGFLVAVGRQYGGLLLDKTLGFVVA 60

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P L+ I L Y             F+G S       +  I +S Y AA+ +EI RS
Sbjct: 61  ILRGTPFLIQIFLVYYGG---------PFVGLSL--DPLPAGLIGISIYGAAYFSEIFRS 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G  AVPRG +EA   +GLT  +  R +LLP+    ++PP  +  + L+K +++   +   
Sbjct: 110 GFQAVPRGHIEAGECVGLTQGQIVRRILLPEMTMLVLPPSLNMAIILMKETAVLSIITVP 169

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L +    I +Q    +E + +    Y  L  +     N    K++   
Sbjct: 170 ELTATLSAIGSQQYAFVEALSMLALFYWVLVELTGWLGNLAETKLSRFR 218



 Score = 37.2 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 34/102 (33%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             AI+ G   T  +   G I A IIG LV  GR     L+       V + R  P L+ I
Sbjct: 12  WPAIVSGAGVTIMIWILGTIAAAIIGFLVAVGRQYGGLLLDKTLGFVVAILRGTPFLIQI 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           F +Y     V    D       G+ +               A
Sbjct: 72  FLVYYGGPFVGLSLDPLPAGLIGISIYGAAYFSEIFRSGFQA 113


>gi|328885476|emb|CCA58715.1| glutamate permease [Streptomyces venezuelae ATCC 10712]
          Length = 296

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 17/252 (6%)

Query: 133 VEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +     +  +        +  + L     S  +          L     T+   A   + 
Sbjct: 22  IVFLAVLALVAWWVLAALNDKNQLAADKWSPFVTDSRVWTTYLLPGLMETLKAAALSILI 81

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +  LG +L +   RLS H   +     P+  +  F    +P L+L+     L+ +     
Sbjct: 82  ALPLGALLGI--GRLSDHRWVRV----PVGAVVEF-FRAIPVLLLMMFAAALYRE----- 129

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F   S+      ++   L  Y A+ IAE+VR+G++++PRGQ +AA ALG+   +   
Sbjct: 130 ---FTTISSDFRPLYAVVTGLVLYNASVIAEVVRAGVLSLPRGQGDAAEALGMRKGQTMT 186

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTG-QAIEIILIW 370
            VLLPQA+  ++P L SQ + ++K+++L    +G+A+L+S    I    G   I    + 
Sbjct: 187 YVLLPQAVTVMLPALVSQLVVIVKDTALGGALLGYAELLSQNRQITANYGANTIATFTVI 246

Query: 371 MFIYLSLSIMIA 382
             IY+ ++ ++ 
Sbjct: 247 ALIYIVINAIVT 258



 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 21/142 (14%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N+   I+   +L ++  W +                  L+++   
Sbjct: 2   SSVLYDTPGPRAKRRNVLFTIVFLAVLALVAWWVLAA----------------LNDKNQL 45

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
             D+     T    + T +L G + T   A   ++ A  +G L+G GRLS ++ V     
Sbjct: 46  AADKWSPFVTDSRVWTTYLLPGLMETLKAAALSILIALPLGALLGIGRLSDHRWVRVPVG 105

Query: 131 VYVEVFRNIPPLVVIFFLYKSV 152
             VE FR IP L+++ F     
Sbjct: 106 AVVEFFRAIPVLLLMMFAAALY 127


>gi|148997218|ref|ZP_01824872.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|168575368|ref|ZP_02721304.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|307067316|ref|YP_003876282.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|147756918|gb|EDK63958.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|183578425|gb|EDT98953.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae MLV-016]
 gi|306408853|gb|ADM84280.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
          Length = 225

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 90/228 (39%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L      +    +I + S +L ++       +    H +  + L  LY+    
Sbjct: 8   VLFQGNNLLRILQGLGVTIEISILSVLLSMMFRTVMGIIM-TSHSRIIRFLTRLYLEFIR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        + L + ++F        N  G         S  I  + +  A + ++VR  
Sbjct: 67  IMP-----QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P+ Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  +
Sbjct: 115 ITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVE 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           +  VG  II+     I      I    + +Y ++   I+     L   
Sbjct: 175 VTKVGQQIIDSNRLTIPTASFWIYGTILVLYFAVCYPISKLSTHLEKH 222



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 37/68 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + +  T++G    S ++++ ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIEISILSVLLSMMFRTVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|271968859|ref|YP_003343055.1| amino acid ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270512034|gb|ACZ90312.1| ABC-type amino acid transport system permease component-like
           protein [Streptosporangium roseum DSM 43021]
          Length = 367

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 105/207 (50%), Gaps = 12/207 (5%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + + V G++L++      + F     +AL + YI  F   G+P++VLI   Y + F  P+
Sbjct: 171 ILAMVFGLLLAIGRLLPGKGFW--PVRALCIAYIDVF--RGIPSVVLI---YLVCFGLPL 223

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +   +     +   +ALS   +A+ AE+ R+G+ ++ + Q  AA+++GL+    
Sbjct: 224 TE----VPILSEGDPILYAVVALSLTYSAYNAELYRAGIESINKSQTSAALSMGLSQPDV 279

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R V+LPQ  R+I  P+ S ++ L K+++L + VG  D  S    I +     +  +   
Sbjct: 280 LRFVILPQMSRNIAAPMLSTFIGLQKDTALVIVVGIIDAFSQAK-IYSANDFNLSAVTAV 338

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKEK 397
            F+++ ++I     ++ L A+ + ++K
Sbjct: 339 CFLFVLITIPQTRLVDYLLARSSTRKK 365



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSA---NKLVAWICRVYVEVFRNIPPLVVIFFLY 149
            +    +A    I A + G L+  GRL        V  +C  Y++VFR IP +V+I+ + 
Sbjct: 159 LLINVEIAIGAQILAMVFGLLLAIGRLLPGKGFWPVRALCIAYIDVFRGIPSVVLIYLVC 218

Query: 150 KSVLSVLPIP 159
             +       
Sbjct: 219 FGLPLTEVPI 228


>gi|54288386|gb|AAV31674.1| predicted abc-type amino acid transport system permease component
           [uncultured alpha proteobacterium EBAC2C11]
          Length = 227

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 16/224 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +   L            + + +F+ G  ++   T L      +  K+  L  ++   I+
Sbjct: 12  PHGIILFQLLAAARFTIYLSLIAFIGGGAVACIITLL------RISKSPALQKVAALFIW 65

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
              ++ L+ L + +    P L   N          + +   AL  +TAA++AE+ R  + 
Sbjct: 66  IFQSVPLLMLLFLIGLGMPGLLDINI-------DPWTAATCALVLFTAAYLAEVWRGAVE 118

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQ EA+ AL + +    R V+ PQA++  I P     + ++K +SLA  +GF DL+
Sbjct: 119 SVAKGQWEASYALNIKYSLLLRKVIFPQAIKFGIAPTVGFMVQIIKGTSLAYIIGFNDLM 178

Query: 351 SVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             G    N      +   +  +   +Y  +   +ALF  +L AK
Sbjct: 179 LAGKRWANAPVPGSEPFVVFPLMAVMYFCICYPLALFARKLEAK 222


>gi|325695481|gb|EGD37381.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 230

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             ++   E++   L   YI  F++   P +VL+ L +   +  P   ++           
Sbjct: 42  AWAQISEEQSFAGLARGYI--FILRCTPPIVLLFLVF---YGIPEFLEWWLGLDINNWSR 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I +    AA IAE+ ++  +AVP+GQ EA +++GL   +    ++LPQA R  +P
Sbjct: 97  TVFVIITMILLFAAMIAEVFKAAYLAVPKGQTEAGLSIGLAPVQTFLRIVLPQAFRIALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            LT+  LNL+++++LA  +G  D++  G  +I++     ++E       IY  ++++++L
Sbjct: 157 NLTTALLNLMRDAALAYTIGAVDVMGAGQNLISRNLGNYSLETYTAVALIYWGIALVVSL 216

Query: 384 FMNRLNAKIALKEK 397
               L   + +KE+
Sbjct: 217 ASQLLEKSLIVKER 230


>gi|325964013|ref|YP_004241919.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470100|gb|ADX73785.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 216

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 18/223 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                  T+  +A   V + VLG +L+      +R       +   ++Y+       L T
Sbjct: 11  YWEGFLRTLFLSAVSGVIALVLGTLLA-----AARVSPVAALRGFSMVYVEVLRNTPL-T 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +        L        QF            ++  IALS YTAAFIAE VRSG+ +VP 
Sbjct: 65  IAFFFAAIVLPRLGVKFEQFE-----------VAAIIALSTYTAAFIAEAVRSGVNSVPV 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G+   +   L++LPQA+R+++PPL +  + L+KNSS+A A    +L   G 
Sbjct: 114 GQAEAARSIGMNFGQVLNLIILPQALRTVVPPLINILIALVKNSSVAGAFFVLELFGYGR 173

Query: 355 TIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + N  G A I ++L   F YL L++ + +  + +  K+A+  
Sbjct: 174 QLANANGDAVIAVLLGTAFFYLLLTVPLGILASTVERKVAIAR 216



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 35/76 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T +L+    + A ++GTL+ A R+S    +     VYVEV RN P  +  FF 
Sbjct: 11  YWEGFLRTLFLSAVSGVIALVLGTLLAAARVSPVAALRGFSMVYVEVLRNTPLTIAFFFA 70

Query: 149 YKSVLSVLPIPDHSIV 164
              +  +    +   V
Sbjct: 71  AIVLPRLGVKFEQFEV 86


>gi|289168270|ref|YP_003446539.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
 gi|288907837|emb|CBJ22677.1| ABC transporter membrane-spanning permease-amino acid transport
           [Streptococcus mitis B6]
          Length = 225

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 89/221 (40%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + G V+ +         H K  + L  LY+    I      
Sbjct: 19  LQGLGVTIGISILSVLLSMMFGTVMGIIM-----TSHSKIVRFLTRLYLEFIRIMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFIVYFGLARNFNINISGK-------TSAIIVFTLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL + +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  
Sbjct: 122 QFESGQALGLINVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+     I      I    + +Y ++   I+     L   
Sbjct: 182 IIDSNRLTIPTASFWIYGTILVLYFAVCFPISKLSTHLEKH 222



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + + GT++G    S +K+V ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMMFGTVMGIIMTSHSKIVRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|313891398|ref|ZP_07825014.1| putative glutamine ABC transporter, permease protein GlnP
           [Dialister microaerophilus UPII 345-E]
 gi|313120173|gb|EFR43349.1| putative glutamine ABC transporter, permease protein GlnP
           [Dialister microaerophilus UPII 345-E]
          Length = 218

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 14/221 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
              + L        T  +I  F  VL ++  LF   + R+        +   YI   L  
Sbjct: 5   YIFKYLHLFVDAGLTTLRIAFFGIVLSLLFGLFI-SVIRYKKVPIISQICKFYIE--LSR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P LV +   Y           F                  L    A+++AE  RSGL 
Sbjct: 62  NTPLLVQLFFLY-----------FGLPKAGIHISGENCALSGLVFLGASYMAEAFRSGLE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V + Q+E+A ALG+   +  R +++PQA+   IP + +  + L+K +S+       DL+
Sbjct: 111 SVAKSQIESAAALGMGEYQIFRFIIIPQAVSVSIPSVCANIIFLIKETSVFSVCAIPDLM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            V   +I    +  E + + +  YL + + +++    L  K
Sbjct: 171 YVAKDLIGLYYKTDETLFMLVISYLIILLPVSIIAYLLERK 211



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 36/76 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    +   + T  +AF G++ + + G  +   R     +++ IC+ Y+E+ RN P LV 
Sbjct: 9   YLHLFVDAGLTTLRIAFFGIVLSLLFGLFISVIRYKKVPIISQICKFYIELSRNTPLLVQ 68

Query: 145 IFFLYKSVLSVLPIPD 160
           +FFLY  +        
Sbjct: 69  LFFLYFGLPKAGIHIS 84


>gi|253581221|ref|ZP_04858478.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847498|gb|EES75471.1| polar amino acid ABC transporter [Ruminococcus sp. 5_1_39BFAA]
          Length = 219

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 14/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V   +L IV+ L    + ++F     + +   YI   L    P L+ +   Y  
Sbjct: 19  LTLHMAVIGVLLAIVVGLV-CSMIKYFRIPVLRQIVECYIE--LSRNTPLLIQLFFLY-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F       V          L+    +++AE  RSGL  VP  Q+E+A++LG
Sbjct: 74  ---------FGLPKIGIVLSSEQCAITGLTFLGGSYMAEAFRSGLDNVPPIQVESALSLG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +    ++LPQA+ + IP   +  + L+K +S+  AV  ADL+ V   +I    +  
Sbjct: 125 MSKSQVFTNIILPQAVSNSIPAFCANAIFLIKETSVFSAVALADLMFVTKDLIGIYYKTD 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E + + +  YL + + I+L  + +  ++   E
Sbjct: 185 EALFMLVIAYLIILLPISLICSFVERRVRYAE 216



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +A  G++ A ++G +    +     ++  I   Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLHMAVIGVLLAIVVGLVCSMIKYFRIPVLRQIVECYIELSRNTPLLIQLFFLYFGLPKI 79

Query: 156 LP 157
             
Sbjct: 80  GI 81


>gi|83950195|ref|ZP_00958928.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83838094|gb|EAP77390.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 246

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 104/240 (43%), Gaps = 8/240 (3%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
           + P    ++ +    +   R L+   +T         FS ++G + +            K
Sbjct: 10  LWPDWFFNLAVVSDEYNRGRYLAGLWMTAKLAVVSIFFSLIIGAIGAAVQGA-----QSK 64

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           T + L   +++ F       LV +   Y        +   N +    +   F    I+LS
Sbjct: 65  TLRVLVGFFVAFFRNTPP--LVQLYFFYFAIGTVLRITGDNGLPQPLIG-NFGWAIISLS 121

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +  A   EI R+G+ AVP+  +EAA ALG T  +    ++LP A+R  +P L +  +NL
Sbjct: 122 LFAGALNVEIFRAGIEAVPKSTVEAAEALGYTRLQIYTDIVLPLAVRISLPALGTNLVNL 181

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +K ++LA A+   +L+ V   I ++     E++ + +  Y+ L  ++   ++R    + +
Sbjct: 182 VKTTTLAYAIAVPELLYVSAQIWSEDLNVREMMNVLLISYVGLVAILVWVLHRWEKALRI 241



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 82  DSSYATA-ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              Y     L G   T  LA   +  + IIG +  A + + +K +  +   +V  FRN P
Sbjct: 22  SDEYNRGRYLAGLWMTAKLAVVSIFFSLIIGAIGAAVQGAQSKTLRVLVGFFVAFFRNTP 81

Query: 141 PLVVIFFLYKSV 152
           PLV ++F Y ++
Sbjct: 82  PLVQLYFFYFAI 93


>gi|254245481|ref|ZP_04938802.1| Glutamate/aspartate transport system permease protein [Burkholderia
           cenocepacia PC184]
 gi|124870257|gb|EAY61973.1| Glutamate/aspartate transport system permease protein [Burkholderia
           cenocepacia PC184]
          Length = 265

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 4/213 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV--LSLFATRLSRHFHEKTGKALPLL 222
             +  +L    L    L   +     V   +L ++      A R +   +    +  PLL
Sbjct: 31  PKYLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKAPRAAAAAYVVAFRNTPLL 90

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               F  FG+ +L+       L+    V      +   +   EF++ ++ LS YTAAF+A
Sbjct: 91  VQLLFWYFGVASLLPETWIAWLNARHAVSVGPFTLAWPSF--EFVAGWVGLSAYTAAFVA 148

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  QY+NL+KNSSLA+
Sbjct: 149 EECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFGQYMNLVKNSSLAM 208

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           A+G A+L      +  +T Q      +   +Y+
Sbjct: 209 AIGVAELSYASRQVETETFQTFAAFGVATLLYI 241



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 56/158 (35%), Gaps = 2/158 (1%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  LA +  + AT+ G L+   R +  K        YV  FRN P LV 
Sbjct: 33  YLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGKAPRAAAAAYVVAFRNTPLLVQ 92

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL--SL 202
           + F Y  V S+LP    + +                        + + ++    V     
Sbjct: 93  LLFWYFGVASLLPETWIAWLNARHAVSVGPFTLAWPSFEFVAGWVGLSAYTAAFVAEECE 152

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
              R  R        AL L  + +     LP  V IAL
Sbjct: 153 AGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 190


>gi|239635973|ref|ZP_04676990.1| L-cystine transport system permease protein TcyL [Staphylococcus
           warneri L37603]
 gi|239598438|gb|EEQ80918.1| L-cystine transport system permease protein TcyL [Staphylococcus
           warneri L37603]
          Length = 227

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 101/214 (47%), Gaps = 9/214 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                       +     + + + +L  +L L  T + R            +Y S   + 
Sbjct: 5   QWLDLFKQVVQQLPITLVMIICALILATILGLILT-MIRIKQVPYLSTCVRVYQSF--MR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P L+ + L Y       ++ Q N             + +A S ++AA+++E+ R+G +
Sbjct: 62  STPLLLQLFLVYFALPQFLLIFQINI----NHFDRLFFIILAFSLHSAAYLSEVFRAGYV 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V   Q+EA +++GL++ +  + +++PQA+R+ IP LT+Q + L+K++SLA  +G  D++
Sbjct: 118 SVDYRQIEAGLSVGLSYPRILKDIIIPQALRNSIPNLTTQIIELIKDTSLAFTIGIIDMM 177

Query: 351 SVGGTIINQTGQA--IEIILIWMFIYLSLSIMIA 382
                II        +E+ ++   IY  L+++I 
Sbjct: 178 GQVQLIIGNNYGLGMLEVYVVISIIYWLLALIIQ 211



 Score = 40.3 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 35/76 (46%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +    +I ATI+G ++   R+     ++   RVY    R+ P L+ +F +Y ++   
Sbjct: 20  TLVMIICALILATILGLILTMIRIKQVPYLSTCVRVYQSFMRSTPLLLQLFLVYFALPQF 79

Query: 156 LPIPDHSIVLPFGMFL 171
           L I   +I     +F 
Sbjct: 80  LLIFQININHFDRLFF 95


>gi|226363679|ref|YP_002781461.1| ABC transporter permease protein [Rhodococcus opacus B4]
 gi|226242168|dbj|BAH52516.1| putative ABC transporter permease protein [Rhodococcus opacus B4]
          Length = 214

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 85/224 (37%), Gaps = 22/224 (9%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                            L    +T+      F+ S VLG+V++L      R         
Sbjct: 1   MSVHWSWDRAFEALPVLLEGFKITLIATVLGFLISVVLGLVIALIRQAAPRWVSAPV--- 57

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                  +  I   P +V +   Y        L                     L  + +
Sbjct: 58  ----RAVSEFIRLTPLVVQLLFVYYTFTGLSPLQI---------------GVAVLGIHYS 98

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            ++AE+ R+G+ AVP GQ EAA AL +   +  R ++LPQA+R ++P L +  +++ K++
Sbjct: 99  TYMAEVYRAGIEAVPVGQWEAARALSIAPARTWRAIILPQAIRRVVPALGNYAVSMFKDT 158

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
               A+   ++V+       +  Q +E + +   I+L  S   +
Sbjct: 159 PFLFAITVVEMVTAAQQFGARHFQYLEPLTLAGVIFLLASYPTS 202



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L GF  T      G + + ++G ++   R +A + V+   R   E  R  P +V + F
Sbjct: 16  VLLEGFKITLIATVLGFLISVVLGLVIALIRQAAPRWVSAPVRAVSEFIRLTPLVVQLLF 75

Query: 148 LYKSVLSVLP 157
           +Y +   + P
Sbjct: 76  VYYTFTGLSP 85


>gi|116751319|ref|YP_848006.1| polar amino acid ABC transporter inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
 gi|116700383|gb|ABK19571.1| polar amino acid ABC transporter, inner membrane subunit
           [Syntrophobacter fumaroxidans MPOB]
          Length = 222

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 29/229 (12%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYIST 226
              L    +T+           VLGI  ++         RL+   +    + +PLL +  
Sbjct: 13  PYMLEGSLVTVVVVVGAMALGLVLGIPFAVGQVYGGPGVRLAIAAYVWFFRGVPLLVLLF 72

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
              FGL +L+ + L                         F    I L   ++A+ ++I R
Sbjct: 73  LFYFGLCSLLDLNL-----------------------SAFTVAIIVLGSISSAYQSQIFR 109

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             ++++P GQ++AA ALG++  KA   V+LPQA+R  IP  +++Y  +LK+S++  A+G 
Sbjct: 110 GAILSLPEGQLKAARALGMSDAKAVFFVILPQALRLSIPGWSNEYSIVLKDSAVTYALGV 169

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           A++++    +  +T Q + + +    IYL L+      +  L +K+ +K
Sbjct: 170 AEIMARTHFVATRTYQHLPLYMAAGAIYLLLTYAGVKGLRLLESKVRIK 218


>gi|256828612|ref|YP_003157340.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
 gi|256577788|gb|ACU88924.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfomicrobium baculatum DSM 4028]
          Length = 222

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 98/223 (43%), Gaps = 15/223 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFAT---RLSRHFHEKTGKALPLLYISTFLIFGL 232
           L      +   A + V + V  + L LF      + + +     + L  LY+  F     
Sbjct: 8   LLDAMPYVLQGATVTVIAVVGAMFLGLFIGVPLAVGQVYGPWAVRTLCGLYVWFFR---- 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                      +     +     F           +  I L   + A+ ++I R  ++++
Sbjct: 64  --------GVPILVLLFLFYFGLFNLVGLNLNAVAAAIIVLGMTSGAYQSQIFRGSILSL 115

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ++AA ALG++   A R ++LPQA+R  IP  +++Y  +LK+S+LA  +G +++++ 
Sbjct: 116 SKGQLKAARALGMSDGLAIRSIILPQALRLSIPGWSNEYSIILKDSALAFVLGASEIMAR 175

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              + ++T Q + + +    +Y  L+    + +  L  +  +K
Sbjct: 176 THFVASRTYQHLPMYVSAAVLYFLLTWAGVIALRALEKRFRIK 218



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 21/54 (38%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            +L G   T       M     IG  +  G++     V  +C +YV  FR +P 
Sbjct: 14  YVLQGATVTVIAVVGAMFLGLFIGVPLAVGQVYGPWAVRTLCGLYVWFFRGVPI 67


>gi|296139503|ref|YP_003646746.1| polar amino acid ABC transporter inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
 gi|296027637|gb|ADG78407.1| polar amino acid ABC transporter, inner membrane subunit
           [Tsukamurella paurometabola DSM 20162]
          Length = 227

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 20/237 (8%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALP 220
              ++         +T+       V + V G++L+  A       R   +F+    +  P
Sbjct: 4   MWDYMGPLLWPAFWMTIKLTVFSGVIALVWGMILAGMAVGPVPIMRSFANFYVNVVRNTP 63

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L  I  F   GL  ++ + L  Q                      F    + LS YTAAF
Sbjct: 64  LTLIILFCWMGLFMMLGLTLAPQ-------------NDSFIKENNFRLAILGLSFYTAAF 110

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E +RSG+  VP GQ EAA ALGL        ++LPQA+R+++ P+ S  + L KNS++
Sbjct: 111 VCETLRSGINTVPVGQAEAARALGLPFFTVFGTIVLPQAIRAVVAPMGSVLIALTKNSTI 170

Query: 341 AVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A  +G ++   +  + +     +I  I  I    ++ L++ + L    L  ++A+K 
Sbjct: 171 ASVIGVSEAALLMKSSVETYPDSIYTIFAIIAVGFVILTLPLGLLFTYLANRLAVKR 227



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +   F  T  L     + A + G ++    +    ++      YV V RN P  ++I F 
Sbjct: 12  LWPAFWMTIKLTVFSGVIALVWGMILAGMAVGPVPIMRSFANFYVNVVRNTPLTLIILFC 71

Query: 149 YKSVLSVLPIPDHSIVLPF 167
           +  +  +L +        F
Sbjct: 72  WMGLFMMLGLTLAPQNDSF 90


>gi|260463586|ref|ZP_05811785.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mesorhizobium opportunistum WSM2075]
 gi|259030677|gb|EEW31954.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Mesorhizobium opportunistum WSM2075]
          Length = 219

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 15/234 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + +        L         + +  +  FVL   L L    + R     TG  + +L  
Sbjct: 1   MIWDWSFTLEILPVLAQAAIVSVEATLIGFVLAATLGLVL-AVVRIAVPWTGWTISVLVE 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI   P L+ I   Y           F F     V   F +  +A+  + AA+ +E+
Sbjct: 60  ---LIRSTPLLIQIFFIY-----------FVFPKFGLVLDAFTAGVLAIGIHYAAYCSEV 105

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G   + RGQ EA+IAL L+     R +++PQA+  I+P L +  + L K + L  A+
Sbjct: 106 YRAGFDNIHRGQWEASIALNLSAWTTFRDIIIPQAIPPIVPALGNYLVALFKETPLLSAI 165

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              +L+     I + T +  E I +    +L++S++ A  +  L   +  +  +
Sbjct: 166 AVMELMQTAKIIGSDTFRYTEPITLVGLFFLAMSLVSAALIRALERLLNRRSTR 219


>gi|293364295|ref|ZP_06611021.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307702739|ref|ZP_07639691.1| nopaline transport system permease protein nocM [Streptococcus
           oralis ATCC 35037]
 gi|315612440|ref|ZP_07887353.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|322374986|ref|ZP_08049500.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
 gi|291317141|gb|EFE57568.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus oralis ATCC 35037]
 gi|307623855|gb|EFO02840.1| nopaline transport system permease protein nocM [Streptococcus
           oralis ATCC 35037]
 gi|315315421|gb|EFU63460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis ATCC 49296]
 gi|321280486|gb|EFX57525.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C300]
          Length = 230

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 88/176 (50%), Gaps = 2/176 (1%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           IS   IF L     I L + + +  P   ++          + + + + +    AA +AE
Sbjct: 55  ISKGYIFTLRCTPPIVLLFLVFYGLPEFLKWWLGLDINNWSKTIFVLLTMILLFAAIVAE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + ++   A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++++LA  
Sbjct: 115 VFKAAYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRDAALAYT 174

Query: 344 VGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           +GF D++  G  +I++     ++E       +Y  ++++I+     L   +  K +
Sbjct: 175 IGFVDVMGAGNLLISRNLGNYSLETYTAVALLYWGIALVISSLSRLLEKSLETKGR 230


>gi|16119458|ref|NP_396164.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15161996|gb|AAK90605.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 222

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 11/163 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I   P L+ I + +           F             +  +ALS Y  A+ +EI+RS
Sbjct: 62  IIRNTPALLQIFIIF-----------FVLPTIGLKFSPIHASIVALSIYFGAYASEILRS 110

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL ++P  Q+EA + LGLT  +    ++LP A+R+I P +TSQ++ LL  +S+A  V   
Sbjct: 111 GLNSIPPSQIEAGVCLGLTRWQVLSRIVLPPAIRNIYPSMTSQFVLLLLGTSIASQVSTD 170

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L    G I ++T ++ E+  +   IY +L +   +    +  
Sbjct: 171 ELFHAAGFIDSRTYRSFEVYALTCGIYFTLVVFFKIVFALVGR 213



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 29/75 (38%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y    + G + T  L  S      IIG +      S  K      R Y+E+ RN
Sbjct: 6   FRPLWRYEDQFIDGVLTTLLLTVSATAIGLIIGIIGAVVLRSGPKPARIGVRAYIEIIRN 65

Query: 139 IPPLVVIFFLYKSVL 153
            P L+ IF ++  + 
Sbjct: 66  TPALLQIFIIFFVLP 80


>gi|71083648|ref|YP_266368.1| putative amino-acid ABC transporter permease protein yhdY
           [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062761|gb|AAZ21764.1| Similar to amino-acid ABC transporter permease protein yhdY
           [Candidatus Pelagibacter ubique HTCC1062]
          Length = 426

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 117/264 (44%), Gaps = 19/264 (7%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRN    +    +   +  +L     S       ++        +LT   +    +F F 
Sbjct: 179 FRN-YLSLYYTLILPIISFILIYYLISGGSFGLEWVETGAWGGLSLTFIVSFFSLIFCFP 237

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G++L+L      R       K   L +I  +    L T++ ++           +    
Sbjct: 238 IGMMLAL-----GRRSDLPVVKYSSLSFIEFWRGVPLITVLFMS----------AVMFPM 282

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + + + +A++ + AA+ AE++R GL A+PRGQ +AA +LG+ + K    V+
Sbjct: 283 FLPDGTYVDKLIRVVVAITLFEAAYTAEVIRGGLQALPRGQYDAAKSLGMGYWKLHIFVI 342

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD---LVSVGGTIINQTGQAIEIILIWMF 372
           LPQA++ +IP + + +L L+K++ L   VG  +   ++++  T     G ++E  +    
Sbjct: 343 LPQALKLVIPGIANTFLALVKDTPLIFVVGLLEVVGMLNLAKTNPEWLGFSMEGYVFAGI 402

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           I+  +   ++ +  +L  K     
Sbjct: 403 IFWIICYSMSKYSQKLELKYKTDR 426



 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF ++F  +I    IG ++  GR S   +V +    ++E +R +P + V+F     
Sbjct: 220 GLSLTFIVSFFSLIFCFPIGMMLALGRRSDLPVVKYSSLSFIEFWRGVPLITVLFMSAVM 279

Query: 152 VLSVLPIPDHSIVL 165
               LP   +   L
Sbjct: 280 FPMFLPDGTYVDKL 293


>gi|324993848|gb|EGC25767.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK405]
 gi|324994831|gb|EGC26744.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK678]
 gi|325687272|gb|EGD29294.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK72]
          Length = 219

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S + G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTIFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 PGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSRKLSQRWA 215



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P 
Sbjct: 9   TATNLLFILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPN 68

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 69  LLWIFTIFLVF 79


>gi|170734677|ref|YP_001773791.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820715|gb|ACA95296.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 244

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 83/215 (38%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   SF  G++L + A  L +         L  LY            +L+A     
Sbjct: 28  LTFGVAAASFCTGVLLGI-AGALGKLSRYAALVWLARLYTMLVRALPELLCLLLAFYAVA 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +  L     + G      F+   ++L     A++ +I R+ L  VP GQ+EAA A G
Sbjct: 87  PAIENALRGSGIVSGDFAFDPFVVAALSLGFIQGAYLTDIFRAALANVPVGQIEAAHAYG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQA 363
           +T  +    + LP A R  +P + + +LN  K++S    +G F DL+         T   
Sbjct: 147 MTPWQTFARIRLPAAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHY 206

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   L+   ++L LSI        L        ++
Sbjct: 207 VFFYLVTAALFLLLSITSTGIFAVLERHANRGTRR 241


>gi|72382452|ref|YP_291807.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Prochlorococcus marinus str.
           NATL2A]
 gi|72002302|gb|AAZ58104.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Prochlorococcus marinus str. NATL2A]
          Length = 299

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 77/237 (32%), Positives = 117/237 (49%), Gaps = 16/237 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+     +       P        P     ++       +    + K+ V S +L   L 
Sbjct: 32  LIRTGLGFNFSWLFKPASFALAEHPLPYTSSDSYAWALFIGWLNSLKVIVSSLILATFLG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI---- 257
                 +R         +   YI+  +I   P L+ +   Y + F       F  I    
Sbjct: 92  TLIG-FARTGTNSLLGLISAGYIT--IIRQTPLLLQLMFWYFVGFLGLKDNMFIQIKNIF 148

Query: 258 ---------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                     G T S EF++L   LS +T+A+IAE++R G+++V RGQ EA  +LG++ R
Sbjct: 149 NISNKGIEFSGLTFSSEFLALLFGLSIFTSAYIAEVIRGGILSVSRGQWEAFRSLGISER 208

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           K    ++LPQA+ +IIP LTSQYLNL KNS+LA+AVG++D+ ++  TIINQTG+AIE
Sbjct: 209 KGLIRIILPQALPAIIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRAIE 265



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 9/180 (5%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           +   + +Q  ++++   +F   +NN+  N+ ++ L     +L + A F + +  +PYTS 
Sbjct: 3   KNQKLFLQFGISIIFFGLFGILINNLTINLIRTGLGFNFSWLFKPASFALAEHPLPYTSS 62

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SYA A+ +G++N+  +  S +I AT +GTL+G  R   N L+  I   Y+ + R  P L
Sbjct: 63  DSYAWALFIGWLNSLKVIVSSLILATFLGTLIGFARTGTNSLLGLISAGYITIIRQTPLL 122

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + + F Y               L   MF+  + +   +      + +   S  L ++  L
Sbjct: 123 LQLMFWYFVGFLG---------LKDNMFIQIKNIFNISNKGIEFSGLTFSSEFLALLFGL 173


>gi|56697507|ref|YP_167875.1| polar amino acid ABC transporter permease [Ruegeria pomeroyi DSS-3]
 gi|56679244|gb|AAV95910.1| polar amino acid uptake family ABC transporter, permease protein
           [Ruegeria pomeroyi DSS-3]
          Length = 264

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 98/269 (36%), Gaps = 13/269 (4%)

Query: 132 YVEVFRNIPPLVVI-FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            V V   +P  +    F   ++   L +      +     L        T     N  I 
Sbjct: 3   PVRVLAAVPVWIPFALFFLCALWPSLALAQSGEAVRPFHALWRWAPFLITKGFLFNILIS 62

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
               ++G  + +    L +    +  + +       F       ++ I +         +
Sbjct: 63  FLCLIIGTGVGVLLG-LCQISLLRPVRRISWFITQLFRNSPWLVILFIVM-------LAL 114

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
             +    G +   P ++   + LS    A I+EIVR  + +VP  Q EAA AL  T ++ 
Sbjct: 115 PFEVTIFGKAYFVPAWIKAVVGLSLPIMANISEIVRGAIRSVPNTQWEAAEALAFTRQQT 174

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII----NQTGQAIEI 366
              ++LPQ  + +IPP  + Y  L   + L   +G  +++++    I    N+    +  
Sbjct: 175 MWRIILPQCFKRMIPPWMNWYAILTMATPLVSILGVEEVMNLTRQAIVAEENRPELLMPF 234

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               + ++ +    IA    RL  K A+K
Sbjct: 235 YGFVLLLFFAYCYPIARLTLRLERKFAVK 263



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 8/175 (4%)

Query: 73  DQGIVPYTSDSSYATAIL-VGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
            + + P+ +   +A  ++  GF+    ++F  +I  T +G L+G  ++S  + V  I   
Sbjct: 34  GEAVRPFHALWRWAPFLITKGFLFNILISFLCLIIGTGVGVLLGLCQISLLRPVRRISWF 93

Query: 132 YVEVFRNIPPLVVIFFLYKS-------VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMD 184
             ++FRN P LV++F +  +             +P     +          +S       
Sbjct: 94  ITQLFRNSPWLVILFIVMLALPFEVTIFGKAYFVPAWIKAVVGLSLPIMANISEIVRGAI 153

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            +     +     +  +   T       +   + +P       ++     LV I 
Sbjct: 154 RSVPNTQWEAAEALAFTRQQTMWRIILPQCFKRMIPPWMNWYAILTMATPLVSIL 208


>gi|301344837|ref|ZP_07225578.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB056]
          Length = 211

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 26/218 (11%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGKALPLLYISTFLIFGLP 233
           L+   +++ +     +   +  I+++     L+R   F+ +  +  PLL    FL +GLP
Sbjct: 10  LTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLP 69

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L                              F    I L+    +++AE  R+GL +V 
Sbjct: 70  KL------------------------GIKIDGFTCGVIGLTFLGGSYMAEAFRAGLQSVA 105

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K SS+  A+   +L+ V 
Sbjct: 106 KGQIDSAKSIGLQPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVT 165

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +I    +  E + + +  YL + + +++  + L  +
Sbjct: 166 KDLIGMDYKTTEALFLLIIAYLIILLPVSILTSYLEHR 203



 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 33/72 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                + T  ++   +I A I+G +         +++  I + Y+E+ RN P L+ +FFL
Sbjct: 5   FFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFL 64

Query: 149 YKSVLSVLPIPD 160
           Y  +  +    D
Sbjct: 65  YYGLPKLGIKID 76


>gi|332040047|gb|EGI76432.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 225

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 85/224 (37%), Gaps = 10/224 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N   L      +       V  FVL  +LS     L     E  G+           I  
Sbjct: 7   NWTALWEHRDLLLNGLGTTVLLFVLAAMLSFVLGCLLAWLLE--GRDNAPRRTLRLGINA 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L  L  +   Y L++  P L              + +  I LSCY AA+ AE++R   + 
Sbjct: 65  LRMLPFLIFIYLLYYGLPSLD--------IRLEAWDAGLIGLSCYYAAYYAEVLRGARLV 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G ++AA A G    KA   ++LPQ +        +  +  LK++S    +   +L +
Sbjct: 117 LPSGSLDAAYAHGYRRGKAFLRIVLPQLVMRTRGESGNLLIMCLKDTSFLGIITVTELTA 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
               + ++    +E  ++ + +Y +L I +   M R       +
Sbjct: 177 AANAMSSRYFIPMEAFVLVLGLYWALGITVDALMRRFGRYGRQR 220


>gi|325267601|ref|ZP_08134253.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Kingella denitrificans ATCC 33394]
 gi|324980951|gb|EGC16611.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Kingella denitrificans ATCC 33394]
          Length = 222

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 18/232 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +     +  + L      +   AKI   S  +  V       L R       +A   LY+
Sbjct: 1   MVLDWLMEGQNLQRLAAGLWLTAKISFISVGISCVTGTAFGLLMR-SRNALLRAGCFLYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I  +P LV + L   L+F  P     +  G                 +  A + ++
Sbjct: 60  EAVRI--IPILVWLFL---LYFGLPEWTGIHLDG-------LWVCVWIFVLWGTAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L ++ + Q+EA +ALGL  R+    +  PQ +R ++P   + +  ++K SSLA  +
Sbjct: 108 VRGALQSIDKHQIEAGLALGLNRRQVFLYIEAPQGLRRVLPSAINLFTRMVKTSSLAALI 167

Query: 345 GFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  ++V VG  II  +       ++ +  +   +Y  +   ++L  NRL  K
Sbjct: 168 GVIEVVKVGQQIIENSLLTQPNASLWVYGLIFILYFIVCYPLSLVANRLEKK 219



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 41/98 (41%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ +  +      +  G   T  ++F  +  + + GT  G    S N L+   C +Y+E 
Sbjct: 2   VLDWLMEGQNLQRLAAGLWLTAKISFISVGISCVTGTAFGLLMRSRNALLRAGCFLYLEA 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            R IP LV +F LY  +     I    + +   +F+  
Sbjct: 62  VRIIPILVWLFLLYFGLPEWTGIHLDGLWVCVWIFVLW 99


>gi|313885683|ref|ZP_07819432.1| putative glutamine ABC transporter, permease protein GlnP
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619048|gb|EFR30488.1| putative glutamine ABC transporter, permease protein GlnP
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 218

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 19/231 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           + +  F M   +  L    LT+  ++   V + +LGI+L            +  G     
Sbjct: 2   NPLFLFSMPQFSFLLQGLWLTITVSSITIVIALILGIILGTLRFENIPILSDLLG----- 56

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                 +I  +  L L+ + +  +F  P +              F S   A+S + +  +
Sbjct: 57  -----LIIDTIRNLPLLLIIFFTYFALPQI--------GIRFSVFWSTVAAMSLFESCMV 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI+RSGL  +P+GQ EA  A GLT  +   L+LLPQA+R++I  + SQ + L+K++SLA
Sbjct: 104 SEIIRSGLKGLPKGQAEAGYAAGLTTWQVLSLILLPQAVRNMITSIISQLIALIKDTSLA 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEI-ILIWMFIYLSLSIMIALFMNRLNAK 391
             +   +++     I NQ   AI I   I   +Y  +   ++L   R   K
Sbjct: 164 TIIALPEIMHNAKIIYNQDVSAIIITFFIVAVLYFLVCYSLSLLGRRFEVK 214



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 39/86 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +       + +L G   T  ++   ++ A I+G ++G  R     +++ +  + ++  RN
Sbjct: 5   FLFSMPQFSFLLQGLWLTITVSSITIVIALILGIILGTLRFENIPILSDLLGLIIDTIRN 64

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIV 164
           +P L++IFF Y ++  +         
Sbjct: 65  LPLLLIIFFTYFALPQIGIRFSVFWS 90


>gi|121610411|ref|YP_998218.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121555051|gb|ABM59200.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 249

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 8/167 (4%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            + +     +L+ L +  +   P L      G       F S+ + L  +  A++++ +R
Sbjct: 64  LVFYMRSVPLLMHLLWIHYLVLPWLMGHGLSG-------FTSVLVTLVIFNGAYLSQTIR 116

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A+ RGQ EAA A+G  H  A R V+ PQAMR++ P +  Q + L+K +SL   +G 
Sbjct: 117 AGMQALHRGQYEAARAMGFGHLAALRRVVGPQAMRNVTPSIVGQLVILIKETSLGSLIGL 176

Query: 347 ADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           A+       + ++ G +++++  +    + +L   + L    L  + 
Sbjct: 177 AETTQQFLDLNDRLGNRSLQVFALLSLTFFALCYPLTLIGRWLEKRY 223


>gi|293365031|ref|ZP_06611748.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
 gi|291316481|gb|EFE56917.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus oralis ATCC 35037]
          Length = 231

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF++G+++S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 27  HIAVWGILGSFLVGLIVSVI-----RHYRVPIFSQLATAYIE--LSRNTPLLIQLFFLY- 78

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 79  ----------FGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+ PQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 129 GLTSVQVFRYVVFPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 188

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 189 DIALAMLVVAYLIMLLPISLVFSWIERRLR 218



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 45/116 (38%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           +   I+ ++    Y       F  T  +A  G++ + ++G +V   R     + + +   
Sbjct: 1   MGGSILDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLVGLIVSVIRHYRVPIFSQLATA 60

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y+E+ RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  YIELSRNTPLLIQLFFLYFGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEA 116


>gi|148926600|ref|ZP_01810282.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845294|gb|EDK22388.1| putative ABC-type amino-acid transporter permease protein
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|307747817|gb|ADN91087.1| Amino acid ABC transporter, permease protein PEB1 [Campylobacter
           jejuni subsp. jejuni M1]
          Length = 221

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            N + + F    +    KI + + ++ IV   F   +++++ ++  K L   YI  F   
Sbjct: 7   FNAQNIEFLMQGLFLTLKIALATCIISIVFGTFL-AITKNYGDRLSKFLAACYIDIFRNT 65

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                 L+       F  PV             P+     I  S YT++ +AEI+R GL 
Sbjct: 66  P-----LLLWMLAACFVLPVFFG--------QFPQAFWGTIGFSLYTSSVMAEIIRGGLN 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P+GQ EAA + G         ++LPQ  R IIP L SQ +  +K+++    +G A+L 
Sbjct: 113 SIPKGQFEAAYSQGFGKFFTLFYIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELT 172

Query: 351 SVGGTIINQTGQAIEIIL---IWMFIYLSLSIMIALFMNRLNAKIA 393
               TI+ +     EI+    +   IY  +   +++ +     K A
Sbjct: 173 YNSKTILAKLTSFEEILAMIGVVAGIYFIICFSLSMLVRYYAKKTA 218



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 5/192 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +A +  I + + GT +   +   ++L  ++   Y+++FRN P L+ +   
Sbjct: 15  LMQGLFLTLKIALATCIISIVFGTFLAITKNYGDRLSKFLAACYIDIFRNTPLLLWMLAA 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI-----FVFSFVLGIVLSLF 203
              +         +     G  L    +    +    N+         +S   G   +LF
Sbjct: 75  CFVLPVFFGQFPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLF 134

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L + F +     L  +  +      L  L +  L Y        L  F  I      
Sbjct: 135 YIILPQTFRKIIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILAKLTSFEEILAMIGV 194

Query: 264 PEFMSLYIALSC 275
              +   I  S 
Sbjct: 195 VAGIYFIICFSL 206


>gi|119897620|ref|YP_932833.1| putative amino acid permease [Azoarcus sp. BH72]
 gi|119670033|emb|CAL93946.1| putative amino acid permease [Azoarcus sp. BH72]
          Length = 362

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 21/228 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                LT+         +F L IVL+L      R       +A+  +Y+       L   
Sbjct: 151 WGGLPLTLMLAVGGIATAFPLAIVLAL-----GRSGPLPAMRAVSSVYVELIRSVPLVPA 205

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A  + +    P   Q +             + +A++ + AA++AE +R  L+A+P G
Sbjct: 206 LFLA-SFLVPLLLPADWQVDV---------LFRVQVAITLFAAAYLAEAIRGALLALPDG 255

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q +AA ALGL   +  R +LLPQA+R+  P + + ++NL K++SL V V   +L      
Sbjct: 256 QRQAAAALGLGWWQTQRHILLPQALRNATPSIANSFINLFKDTSLVVVVSLYELTGALEI 315

Query: 356 IIN-----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +      ++ Q +E  +    IY +    ++    RL  + A +  +
Sbjct: 316 ALAGDAEWRSYQ-LEGYVFIGAIYWTGCFALSRASRRLEQRDAARAGR 362



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 4/160 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  LA  G+  A  +  ++  GR      +  +  VYVE+ R++P +  +F  
Sbjct: 150 LWGGLPLTLMLAVGGIATAFPLAIVLALGRSGPLPAMRAVSSVYVELIRSVPLVPALFLA 209

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVF----SFVLGIVLSLFA 204
              V  +LP      VL           +         A + +          + L  + 
Sbjct: 210 SFLVPLLLPADWQVDVLFRVQVAITLFAAAYLAEAIRGALLALPDGQRQAAAALGLGWWQ 269

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T+      +    A P +  S   +F   +LV++   Y+L
Sbjct: 270 TQRHILLPQALRNATPSIANSFINLFKDTSLVVVVSLYEL 309


>gi|238750305|ref|ZP_04611807.1| ABC-type amino acid transport system permease component [Yersinia
           rohdei ATCC 43380]
 gi|238711538|gb|EEQ03754.1| ABC-type amino acid transport system permease component [Yersinia
           rohdei ATCC 43380]
          Length = 249

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 105/225 (46%), Gaps = 11/225 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   + S + G+  ++    L        G    +L       
Sbjct: 10  WTYLLWGTFPDGPLGGAALTVLISLMAGVASAILGIFLGILLAMSRGVWAGILAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   AA++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIAAAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +   + N++    +E+ L    IY  L + + +  N LN + +
Sbjct: 180 TFLATQVNNRSMVYPMEVFLFVALIYFVLCLALDVLANGLNRRFS 224


>gi|225026585|ref|ZP_03715777.1| hypothetical protein EUBHAL_00835 [Eubacterium hallii DSM 3353]
 gi|224956077|gb|EEG37286.1| hypothetical protein EUBHAL_00835 [Eubacterium hallii DSM 3353]
          Length = 136

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           ++  F +  IA     AA+ +EI R G+ +V +GQ EA   LG+T  +    ++L Q ++
Sbjct: 3   MNSRFTAAVIAFVINYAAYFSEIYRGGIESVSKGQYEAGQVLGMTKTQIFFKIILLQVIK 62

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            IIPPL+++ + L K++SLA  +G A+++        Q    I  +      +L  + ++
Sbjct: 63  RIIPPLSNEVITLTKDTSLARIIGLAEIIMCAERFTKQ--GLIWPLFSTAVFFLVFNGIL 120

Query: 382 ALFMNRLNAKI 392
            +    +  K+
Sbjct: 121 TILFGWIEKKM 131


>gi|168576494|ref|ZP_02722368.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|307067223|ref|YP_003876189.1| amino acid ABC transporter permease [Streptococcus pneumoniae
           AP200]
 gi|183577685|gb|EDT98213.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae MLV-016]
 gi|306408760|gb|ADM84187.1| ABC-type amino acid transport system, permease component
           [Streptococcus pneumoniae AP200]
          Length = 219

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A + EI+R GL AV +GQ EA ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALVEIIRGGLNAVDKGQYEAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 50.3 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|251792009|ref|YP_003006729.1| arginine transporter permease subunit ArtM [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533396|gb|ACS96642.1| arginine transport system permease protein [Aggregatibacter
           aphrophilus NJ8700]
          Length = 227

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 11/178 (6%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA---- 279
           +   L  G P LV   L Y         GQF ++  S +   F + +   +   A     
Sbjct: 51  LYLTLFTGTPLLVQFFLIYAGP------GQFQWVVDSPLWSLFSNAWFCAALALALNSAA 104

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           +  ++    + A+P+GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K ++
Sbjct: 105 YSTQLFHGAVKAIPKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTA 163

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           LA  +   D++     +      A+ I  I   IYL ++ +  L + +L  ++   E+
Sbjct: 164 LASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRKLENRVLAFER 221


>gi|239982701|ref|ZP_04705225.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 212

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 10/222 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L    +T+         S VLG VL+       R       +     Y++      L  
Sbjct: 1   MLGAFWVTVKLTLLSGAGSLVLGTVLAAM-----RVSPVPLMRGFATAYVNIVRNIPLTV 55

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +++               +    G       F    + LS YTAAF+ E VRSG+  VP 
Sbjct: 56  IIVFT-----SLGLADTFRLTLGGEGVKEVAFRMAVLGLSTYTAAFVCESVRSGINTVPV 110

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ALGL   +   L++LPQA R++I PL +  + L KN+++A A+G  +   +  
Sbjct: 111 GQAEAARALGLNFTQVLTLIVLPQAFRTVIGPLANVLIALTKNTTVAAAIGVGEASLLMK 170

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++    Q + I  ++   ++ L++   L +  L  ++A+K 
Sbjct: 171 EMVENEAQLVLITAVFALGFVILTLPTGLLLGWLGKRLAVKR 212



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L       + ++GT++ A R+S   L+      YV + RNIP  V+I F 
Sbjct: 1   MLGAFWVTVKLTLLSGAGSLVLGTVLAAMRVSPVPLMRGFATAYVNIVRNIPLTVIIVFT 60

Query: 149 YKSVLSVLP 157
              +     
Sbjct: 61  SLGLADTFR 69


>gi|325062210|gb|ADY65900.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 217

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A       ++GI+  +   +L  ++      +LPL ++   +   +P L+ + L    
Sbjct: 24  VTAVAVTAGTLMGIIFGVIRFQLGAYW------SLPLTFV-LDVFRSVPLLIQLVLGNAF 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                +             P F +  + LS YTAA+  EIVR G+ AVP     A  +LG
Sbjct: 77  QSIAKLGW-----------PPFTTSCVVLSLYTAAYCTEIVRGGIEAVPSNTRRACRSLG 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++LP A R  +P      L ++K+S+L + +G  +L+     ++ +  + +
Sbjct: 126 MTWSQDMRYIVLPLATRVSLPAWIGLTLGVMKDSALVLWLGLIELLRASQILVTRLQEPL 185

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I++I   IY  +S  IA F   L  + +
Sbjct: 186 TILMICGAIYFLISFPIARFGGYLERRWS 214


>gi|325289251|ref|YP_004265432.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324964652|gb|ADY55431.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 233

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 13/212 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  F+F   LG+V++L      R        A+  LY+S   + G P LV + L + 
Sbjct: 25  FVAALSFMFGLALGVVIALV-----RIKKRPVPYAIATLYVSF--MRGTPALVQLFLIF- 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P L     I  +  +    +  I  S + AAF++E +RS  +AV  GQ+EAA ++
Sbjct: 77  --YGLPQLLLLLNIDINDWNVAIFA-IITFSLHIAAFLSEAIRSSYLAVGNGQLEAAYSI 133

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-- 361
           GL   +A RLV+LPQ +   +P L +  L LLK +S+A  +G  D++      +      
Sbjct: 134 GLNDFQALRLVMLPQVLNLSLPTLGNNALILLKETSVAFTIGLVDIMGQAQVYLQIHYGM 193

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               + L+    Y  L + I   +  +  + A
Sbjct: 194 NMFGVYLLISLFYWLLCLAIERGVAYMEKRYA 225


>gi|54302944|ref|YP_132937.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
 gi|46916372|emb|CAG23137.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum SS9]
          Length = 315

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 4/195 (2%)

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ----LHFDKPVLGQFNF 256
           SL   RL    + +  + +P L       F + + ++ A+        H       Q   
Sbjct: 114 SLMILRLPAQAYIQLVRNIPPLVFVFIFYFFISSQLVPAIGLADTLRYHTGDINGLQHFL 173

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G S +     S  + +   +AA+IAEI+RSGL A+ +GQ EAA +LGL+     + V+ 
Sbjct: 174 FGSSKLWENLFSGVLCVGLISAAYIAEIIRSGLDAIAKGQWEAADSLGLSRWSRFKDVIF 233

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA   ++PPL  Q+++L+K+SS+   +   ++  VG  + N +G   EI L+    YL 
Sbjct: 234 PQAFAGVVPPLAGQFISLVKDSSIISLISIQEMTFVGSEMANSSGLIFEIWLLVGAGYLV 293

Query: 377 LSIMIALFMNRLNAK 391
           L + ++L  +RL  +
Sbjct: 294 LCLGLSLLFSRLEKR 308



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 1/132 (0%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL-VVIF 146
               GFV T  L+  GMI A ++G  +G  R S+  ++    + Y+++ RNIPPL  V  
Sbjct: 81  YFFQGFVTTIRLSLWGMIFAGLLGLFLGLARRSSLMILRLPAQAYIQLVRNIPPLVFVFI 140

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F +     ++P    +  L +     N    F   +      +F     +G++ + +   
Sbjct: 141 FYFFISSQLVPAIGLADTLRYHTGDINGLQHFLFGSSKLWENLFSGVLCVGLISAAYIAE 200

Query: 207 LSRHFHEKTGKA 218
           + R   +   K 
Sbjct: 201 IIRSGLDAIAKG 212


>gi|213156956|ref|YP_002319001.1| ABC-type amino acid transport system [Acinetobacter baumannii
           AB0057]
 gi|215483767|ref|YP_002325992.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|294837739|ref|ZP_06782422.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           6013113]
 gi|294859374|ref|ZP_06797143.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           6013150]
 gi|301510864|ref|ZP_07236101.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii AB058]
 gi|301596926|ref|ZP_07241934.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii AB059]
 gi|213056116|gb|ACJ41018.1| ABC-type amino acid transport system [Acinetobacter baumannii
           AB0057]
 gi|213988347|gb|ACJ58646.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
          Length = 219

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 100/235 (42%), Gaps = 26/235 (11%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTG 216
            +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  
Sbjct: 1   MNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL +GLP L                              F    I L+  
Sbjct: 61  RNTPLLIQLFFLYYGLPKL------------------------GIKIDGFTCGVIGLTFL 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K
Sbjct: 97  GGSYMAEAFRAGLQSVAKGQIDSAKSIGLQPTQIFRYVIFPQALAISIPAIGANCLFLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  +
Sbjct: 157 ESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIIAYLIILLPVSILTSYLEHR 211



 Score = 36.5 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 33/72 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                + T  ++   +I A I+G +         +++  I + Y+E+ RN P L+ +FFL
Sbjct: 13  FFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELSRNTPLLIQLFFL 72

Query: 149 YKSVLSVLPIPD 160
           Y  +  +    D
Sbjct: 73  YYGLPKLGIKID 84


>gi|307702258|ref|ZP_07639218.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus oralis ATCC 35037]
 gi|307624271|gb|EFO03248.1| amino ABC transporter, permease protein His/Glu/Gln/Arg/opine
           family [Streptococcus oralis ATCC 35037]
          Length = 226

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                  + SF++G+++S+      RH+       L   YI   L    P L+ +   Y 
Sbjct: 22  HIAVWGILGSFLVGLIVSVI-----RHYRVPIFSQLATAYIE--LSRNTPLLIQLFFLY- 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F       V    +   + L     +++AE  RSGL AV + Q E  +A+
Sbjct: 74  ----------FGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEAVSQTQHEIGLAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R V+ PQA    +P  ++  + L+K +S+  AV  ADL+ V   +I    + 
Sbjct: 124 GLTSVQVFRYVVFPQATAVALPSFSANVIFLIKETSVFSAVALADLMYVAKDLIGLYYET 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              + + +  YL + + I+L  + +  ++ 
Sbjct: 184 DIALAMLVVAYLIMLLPISLVFSWIERRLR 213



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G++ + ++G +V   R     + + +   Y+E+ 
Sbjct: 1   MDWSIVEQYLPLYQKAFFLTLHIAVWGILGSFLVGLIVSVIRHYRVPIFSQLATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATVGLIFLGGSYMAESFRSGLEA 111


>gi|152994485|ref|YP_001339320.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150835409|gb|ABR69385.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 220

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 95/231 (41%), Gaps = 18/231 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
            +     +  ++  LS    T++      +   VLG V +      +R           +
Sbjct: 1   MLYFSDLLQYSDVFLSGLKTTVELTVLTTILGVVLGTVCATVRQYGNRASQR-------V 53

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           + +   LI   P +V +   +           F       +   + +  IAL+    A+ 
Sbjct: 54  VSVYVELIRNTPFIVQLFFIF-----------FGLPAIGMMLSPWEASMIALTINLGAYS 102

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI+R+GL ++  GQ+EAA  LGL  R+    V+   A   I P LTSQ + ++  S++ 
Sbjct: 103 TEIIRAGLASISNGQIEAAKVLGLNFRQTLTRVIFIPAFEKIYPALTSQCIIVMLGSAVI 162

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +   DL      + ++  +A E  L+   +YL LSI++    N L  ++
Sbjct: 163 SQISVQDLTYAANLVQSRNFRAFESYLVTALLYLGLSILLRFAFNALGKRL 213



 Score = 39.9 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 40/94 (42%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           ++    Y+   L G   T  L     I   ++GT+    R   N+    +  VYVE+ RN
Sbjct: 4   FSDLLQYSDVFLSGLKTTVELTVLTTILGVVLGTVCATVRQYGNRASQRVVSVYVELIRN 63

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P +V +FF++  + ++  +          + +N
Sbjct: 64  TPFIVQLFFIFFGLPAIGMMLSPWEASMIALTIN 97


>gi|91780197|ref|YP_555404.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692857|gb|ABE36054.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 231

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/173 (27%), Positives = 89/173 (51%), Gaps = 9/173 (5%)

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + LP L +   ++     + ++ L +   F  PVL   +        P   ++  AL+  
Sbjct: 55  RGLPHLLL-LAVVGLFRAIPVLMLIFWTFFLMPVLLHVDV-------PGLATVVCALALI 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             A+++  V++G++AV  GQ +AA +LG+T  +A R VLLPQA+R++ P   +Q+++L+K
Sbjct: 107 GGAYLSHSVQAGIVAVGDGQWQAAQSLGMTRGQALRHVLLPQAIRTMTPSFVNQWVSLIK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++SLA  VG  +   +   + ++      +I L    +YL L       + RL
Sbjct: 167 DTSLAYIVGVPEFTFLANQVNSRLMVYPAQIFLFVGLVYLVLCCTFQWGVTRL 219


>gi|171320701|ref|ZP_02909715.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171094061|gb|EDT39157.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 244

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 9/220 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +    +T++ +    + S   G+VL+      S                   +    PT
Sbjct: 29  FVHGMGVTLELSIATALGSLACGVVLAALLVSPSAALARPA-------RAFVEVTRNTPT 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV +   + L  +  +      +GG+ ++P F+   I +S +  AF AE +R+GL AVPR
Sbjct: 82  LVQLFCAF-LVVNMLISAALRDLGGNPLTP-FVWSVIVISLHKGAFHAEALRAGLEAVPR 139

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
             +EAA +LG + R+    V LP A+R  +P L +  ++L+K +++A A+   D+     
Sbjct: 140 ATLEAAQSLGYSRRQRLWHVQLPLAVRFALPALVNNLVDLVKMTTVASAIAVGDVTYASI 199

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I  Q    +E++++ +  +  L+  + L    L  ++ +
Sbjct: 200 MIWTQRDNVLELMILILLFFGMLTFTVNLAGRWLEHRLRI 239



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  L+ +  + +   G ++ A  +S +  +A   R +VEV RN P LV +F  
Sbjct: 29  FVHGMGVTLELSIATALGSLACGVVLAALLVSPSAALARPARAFVEVTRNTPTLVQLFCA 88

Query: 149 YKSV 152
           +  V
Sbjct: 89  FLVV 92


>gi|57168604|ref|ZP_00367737.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           coli RM2228]
 gi|305433022|ref|ZP_07402178.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|57020109|gb|EAL56786.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           coli RM2228]
 gi|304443723|gb|EFM36380.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 233

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 8/183 (4%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLY 270
           + +  +  PLL    FL + LP       K+ +H +  P L          + P F    
Sbjct: 56  YIEFSRNTPLLIQLFFLYYALP-------KFDIHLEQIPPLNLICLSVDEALRPAFACAI 108

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + LS    +++AE  R+G  A+ + Q EA ++LG T     R V++PQA+   +P +++ 
Sbjct: 109 VGLSFLGGSYMAESFRAGFEAIKKQQFEAGLSLGFTKLNNLRYVIMPQALGVCLPGISAN 168

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + L+K +S+   +   DLV+V   + + T +  E++L+    YL + + I+LF+  L  
Sbjct: 169 IVFLIKETSVVSIIALPDLVTVMKGLNSLTYKTDELLLLLFLGYLCIILPISLFLFFLEK 228

Query: 391 KIA 393
           + +
Sbjct: 229 RFS 231


>gi|167738654|ref|ZP_02411428.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei 14]
          Length = 176

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 8   VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 60

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 61  HAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 120

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 121 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 157


>gi|241204561|ref|YP_002975657.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858451|gb|ACS56118.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 225

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 14/208 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L      + T   + + SF   + + +    ++     +  +     +I 
Sbjct: 4   NFSFRAIVEYLPLFGQGLFTTVWLSLLSFAGALAVGIVLVAMN-LQPARLFRLPARAFID 62

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                      L+A  Y L+F  P L          + PE +   +ALS  + A+IAEI+
Sbjct: 63  AVRATP-----LLAQLYFLYFGLPRL--------GFILPELVVGILALSLNSGAYIAEII 109

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G++++ RGQ+EA IA G+T  +  R V+LPQA +  IPPL  Q + L+K+S+L   + 
Sbjct: 110 RAGILSIHRGQVEAGIASGMTFIQRMRFVILPQAFKVTIPPLLGQAIVLVKDSALLSLIS 169

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFI 373
            A+L   G  + +      E  +     
Sbjct: 170 VAELTRAGQLLASDRFMPAEGFMTIAAF 197


>gi|90414858|ref|ZP_01222824.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
 gi|90324036|gb|EAS40627.1| putative amino acid ABC transporter, permease protein
           [Photobacterium profundum 3TCK]
          Length = 315

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 4/195 (2%)

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ----LHFDKPVLGQFNF 256
           SL   RL    + +  + +P L       F + + ++ A+        H       Q   
Sbjct: 114 SLMILRLPAQAYIQLVRNIPPLVFVFIFYFFISSQLVPAIGLADTLRHHAGDINGLQHFL 173

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G S +     S  + +   +AA+IAEI+RSGL A+ +GQ EAA +LGL+     R V+ 
Sbjct: 174 FGSSKLWENLFSGVLCVGLISAAYIAEIIRSGLDAIAKGQWEAADSLGLSRWSRFRDVIF 233

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA   I+PPL  Q+++L+K+SS+   +   ++  VG  + N +G   EI L+    YL 
Sbjct: 234 PQAFAGIVPPLAGQFISLVKDSSIISLISIQEMTFVGSEMANSSGLIFEIWLLVGVGYLV 293

Query: 377 LSIMIALFMNRLNAK 391
           L + ++L  +RL  +
Sbjct: 294 LCLGLSLLFSRLEKR 308



 Score = 39.9 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 1/168 (0%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL-VVIF 146
               GFV T  L+  GMI A ++G  +G  R S+  ++    + Y+++ RNIPPL  V  
Sbjct: 81  YFFQGFVTTIRLSLWGMIFAGLLGLFLGLARRSSLMILRLPAQAYIQLVRNIPPLVFVFI 140

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F +     ++P    +  L       N    F   +      +F     +G++ + +   
Sbjct: 141 FYFFISSQLVPAIGLADTLRHHAGDINGLQHFLFGSSKLWENLFSGVLCVGLISAAYIAE 200

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           + R   +   K       S  L        +I  +       P+ GQF
Sbjct: 201 IIRSGLDAIAKGQWEAADSLGLSRWSRFRDVIFPQAFAGIVPPLAGQF 248


>gi|116671349|ref|YP_832282.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116611458|gb|ABK04182.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Arthrobacter sp. FB24]
          Length = 216

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 18/223 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                  T+  +A   V + VLG VL+      +R       +   + Y+       L T
Sbjct: 11  YWEGFLRTLFLSAVSGVIALVLGTVLA-----AARVSPVAALRGFSMTYVEILRNTPL-T 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +        L        QF            ++  IALS YTAAFIAE VRSG+ +VP 
Sbjct: 65  IAFFFAAIVLPRLGVKFEQFE-----------VAAIIALSAYTAAFIAEAVRSGVNSVPV 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G+   +   L++LPQA+R++IPPL +  + L+KNSS+A A    +L   G 
Sbjct: 114 GQAEAARSIGMKFGQVLSLIILPQALRTVIPPLINILIALVKNSSVAGAFFVLELFGYGR 173

Query: 355 TIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + N  G A + ++L   F YL +++ + +  + +  K+A+  
Sbjct: 174 QLANANGDAVLAVLLGVAFFYLLITVPLGILASTVERKVAIAR 216



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T +L+    + A ++GT++ A R+S    +      YVE+ RN P  +  FF 
Sbjct: 11  YWEGFLRTLFLSAVSGVIALVLGTVLAAARVSPVAALRGFSMTYVEILRNTPLTIAFFFA 70

Query: 149 YKSVLSVLPIPDHSIV 164
              +  +    +   V
Sbjct: 71  AIVLPRLGVKFEQFEV 86


>gi|315633805|ref|ZP_07889094.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Aggregatibacter segnis ATCC 33393]
 gi|315477055|gb|EFU67798.1| arginine ABC superfamily ATP binding cassette transporter, permease
           protein [Aggregatibacter segnis ATCC 33393]
          Length = 226

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            +F L ++ ++           K  K+   LY++ F   G P LV   L Y         
Sbjct: 26  IAFSLALLFTILL-----SIGNKVVKSAVNLYLTLFT--GTPLLVQFFLIYAGP------ 72

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAA----FIAEIVRSGLIAVPRGQMEAAIALGLTH 307
           GQF +I  S +   F + +   +   A     +  ++    + A+P+GQ E+  ALGL+ 
Sbjct: 73  GQFQWIVDSPLWLLFSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCEALGLSR 132

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +    +LLP A++  +P  +++ + + K ++LA  +   D++     +      A+ I 
Sbjct: 133 LQTL-KILLPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDALTIY 191

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I   IYL ++ +  L + +L  K+   E+
Sbjct: 192 GIAGGIYLVITGIATLLLRKLENKVLAFER 221


>gi|167840668|ref|ZP_02467352.1| ABC transporter, inner-membrane component [Burkholderia
           thailandensis MSMB43]
          Length = 217

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 16/214 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-ISTFLIFGLPTLVLIALKYQ 243
              ++ V + ++G+V       L        G+A  L Y +  +LI G P L  + + Y 
Sbjct: 17  VTLEVSVLAALVGMVAGFTLNAL----RLAFGRAFALPYGVFIWLIRGTPYLSQLVIIY- 71

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F             +  ++L+ Y +A+ AEI R+   +VPRGQ+EAA A 
Sbjct: 72  ----------FGLPMIGVTMSAVEATVVSLALYASAYFAEIFRAAWASVPRGQLEAAAAF 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++ R   R + LPQA+   +P + +Q + ++K S++A  +   +L      ++  T   
Sbjct: 122 GVSRRATFRAIELPQALAFALPLIANQTILVIKESAVASIITVPELTMTASDVVASTYTY 181

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I    + +  Y  L+  ++L   R  A+I    K
Sbjct: 182 IGPYALLIACYWLLTQAVSLLAQRATARIPFLRK 215


>gi|167919030|ref|ZP_02506121.1| amino acid ABC transporter, His/Glu/Gln/Arg/opine family, permease
           protein [Burkholderia pseudomallei BCC215]
          Length = 242

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 79/157 (50%), Gaps = 8/157 (5%)

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I     + ++ L +  +F  PVL   +        P   ++  ALS    A++A  V
Sbjct: 78  VVVIGFFRAIPVLMLIFWTYFLLPVLLHADV-------PGLAAVVCALSLVGGAYLAHSV 130

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +G+ A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q+++L+K++SLA  VG
Sbjct: 131 HAGIRAAGAGQWQAGLSLGLTRWQTVRHVLLPQAVRIMTPSFVNQWVSLVKDTSLAYIVG 190

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMI 381
             +L  V   + N+      +I L    IYL L   +
Sbjct: 191 VPELSFVATQVNNRLMVYPAQIFLFVGVIYLILCTAL 227


>gi|302551654|ref|ZP_07303996.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469272|gb|EFL32365.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           viridochromogenes DSM 40736]
          Length = 216

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 87/221 (39%), Gaps = 18/221 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +                  +T+       + SFVLG+V +L     SR      G     
Sbjct: 2   NWDWSAVSDFMPDFWKGLLVTLQILLLGSLISFVLGLVWALLMRVPSRWVTWPVGAV--- 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
               T  +   P LV +   + +                       +   A+  + + + 
Sbjct: 59  ----TEFVRNTPLLVQLFFLFYV-----------LPEWGLTFSALSTGVFAIGLHYSTYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++ R+G+ AVP GQ EAA AL L  R+    V+LPQA+R +IP L +  + +LK++ + 
Sbjct: 104 MQVYRAGIEAVPVGQWEAATALNLPLRRTWTAVILPQAVRRVIPALGNYVIAMLKDTPML 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +A+   +++        +  Q  E + +    ++ +S + +
Sbjct: 164 MAITVLEMLGHARLFSQEHFQFTEPLTVIGAAFIVISYLAS 204


>gi|37525532|ref|NP_928876.1| arginine transporter permease subunit ArtM [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784960|emb|CAE13878.1| Arginine transport system permease protein artM [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 222

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 95/224 (42%), Gaps = 6/224 (2%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +      + T+  + V + +   ++S+  T +      K      L+     L  G P 
Sbjct: 4   YIQQILPGLQTSLSLTVTALLAAFMMSVLFTMV---LTMKLPVLTQLVKAYITLFTGTPL 60

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV   L Y      P +  + ++      P ++   + L+  +AA+   +    + A+P 
Sbjct: 61  LVQFFLIYYGPGQFPAIKAYPWLWQLLSEP-WLCAMVTLALNSAAYSTLLFYGAVKAIPA 119

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ ++  ALG++  ++ + +LLP A +  +   +++ + + K++SLA  +   +++    
Sbjct: 120 GQWQSCQALGMSKAQSMQ-ILLPYAFKRALSSYSNEVVLIFKSTSLASTITLLEVMGYSQ 178

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +  +    +   +    IYL ++ ++ L M  +  +    E+ 
Sbjct: 179 LLFGRNYDVM-AFIAAGVIYLCVNGILTLLMRIIERRALAFERH 221



 Score = 39.9 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 37/117 (31%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   +  L  + ++ A ++  L          ++  + + Y+ +F   P LV 
Sbjct: 4   YIQQILPGLQTSLSLTVTALLAAFMMSVLFTMVLTMKLPVLTQLVKAYITLFTGTPLLVQ 63

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            F +Y        I  +  +           +    L     + +  +  V  I   
Sbjct: 64  FFLIYYGPGQFPAIKAYPWLWQLLSEPWLCAMVTLALNSAAYSTLLFYGAVKAIPAG 120


>gi|91763311|ref|ZP_01265275.1| amino-acid ABC transporter permease protein yhdY-like protein
           [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717724|gb|EAS84375.1| amino-acid ABC transporter permease protein yhdY-like protein
           [Candidatus Pelagibacter ubique HTCC1002]
          Length = 426

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 117/264 (44%), Gaps = 19/264 (7%)

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFV 195
           FRN    +    +   +  +L     S       ++        +LT   +    +F F 
Sbjct: 179 FRN-YLSLYYTLILPIISFILIYYLISGGSFGLEWVETGAWGGLSLTFIVSFFSLIFCFP 237

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +G++L+L      R       K   L +I  +    L T++ ++           +    
Sbjct: 238 IGMMLAL-----GRRSDLPVVKYSSLSFIEFWRGVPLITVLFMS----------AVMFPM 282

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+   T   + + + +A++ + AA+ AE++R GL A+PRGQ +AA +LG+ + K    V+
Sbjct: 283 FLPDGTYVDKLIRVVVAITLFEAAYTAEVIRGGLQALPRGQYDAAKSLGMGYWKLHIFVI 342

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD---LVSVGGTIINQTGQAIEIILIWMF 372
           LPQA++ +IP + + +L L+K++ L   VG  +   ++++  T     G ++E  +    
Sbjct: 343 LPQALKLVIPGIANTFLALVKDTPLIFVVGLLEVVGMLNLAKTNPEWLGFSMEGYVFAGI 402

Query: 373 IYLSLSIMIALFMNRLNAKIALKE 396
           I+  +   ++ +  +L  K     
Sbjct: 403 IFWIICYSMSKYSQKLELKYKTDR 426



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G   TF ++F  +I    IG ++  GR S   +V +    ++E +R +P + V+F   
Sbjct: 218 WGGLSLTFIVSFFSLIFCFPIGMMLALGRRSDLPVVKYSSLSFIEFWRGVPLITVLFMSA 277

Query: 150 KSVLSVLPIPDHSIVL 165
                 LP   +   L
Sbjct: 278 VMFPMFLPDGTYVDKL 293


>gi|306828836|ref|ZP_07462028.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
 gi|304429014|gb|EFM32102.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus mitis ATCC 6249]
          Length = 230

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            IF L     I L + + +  P   ++          + + + + +    AA +AE+ ++
Sbjct: 59  YIFTLRCTPPIVLLFLVFYGLPEFLKWWLGLDINNWSKTIFVLLTMILLFAAIVAEVFKA 118

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
              A+P+GQ EA +++GLT  +    ++ PQA +  +P +T+  LNL+++++LA  +GF 
Sbjct: 119 AYQAIPKGQTEAGLSIGLTPSQTFWRIIFPQAFQVALPNITTAILNLMRDAALAYTIGFV 178

Query: 348 DLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           D++  G  +I++     ++E       +Y  ++++I+     L   +  K +
Sbjct: 179 DVMGAGNLLISRNLGNYSLETYTAVALLYWGIALVISSLSRLLEKSLETKGR 230


>gi|224368516|ref|YP_002602679.1| GlnP3 [Desulfobacterium autotrophicum HRM2]
 gi|223691232|gb|ACN14515.1| GlnP3 [Desulfobacterium autotrophicum HRM2]
          Length = 219

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            ++  +AL   ++AF ++I R  ++++  GQ+EAA A+GL+       V++PQ +R  I 
Sbjct: 83  MVAAILALGLCSSAFQSQIFRGAILSIQSGQLEAAKAMGLSLPGTIFHVVIPQMIRLSIG 142

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALF 384
           P T+++ + LK++SLA  VG  +++     +I  T      + L    +Y +L+ +   F
Sbjct: 143 PWTNEFSSELKDTSLAYVVGVVEIMRNAKYVIAYTYGNTAAVYLFVGILYFTLTRIGTYF 202

Query: 385 MNRLNAKI 392
             +L  K+
Sbjct: 203 FYKLEEKL 210


>gi|311107043|ref|YP_003979896.1| amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine
           family domain-containing protein 12 [Achromobacter
           xylosoxidans A8]
 gi|310761732|gb|ADP17181.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein 12
           [Achromobacter xylosoxidans A8]
          Length = 227

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 101/219 (46%), Gaps = 11/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS    T+       V   +LG +L++     +R +  +       +Y++ F      +L
Sbjct: 18  LSGLRFTLLLTLTSTVGGVLLGTLLAV-----ARLYGGRLAAWPATVYVNLFR-----SL 67

Query: 236 VLIALKYQLHFDKPV-LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            L+ + + ++F  P  L          V     S +I    + AA+ +EI+R+G+ +V  
Sbjct: 68  PLVLVIFLIYFILPYALQAITGSERPIVLGAMGSAFITFILFEAAYFSEIIRAGVGSVGP 127

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ  A  ALGL H +  R V+LPQA R+++P L +Q + + + ++L   +   D +    
Sbjct: 128 GQYAAGSALGLRHGQVLRKVILPQAFRNMLPVLLTQVIVIFQETALVYVLSLTDFLGAAT 187

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I  +  + +E+ ++   ++  +S   +  +  L A+I 
Sbjct: 188 KIAQRDNRLVEMYMLVALVFFVISFTASRGVRALRARIG 226



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 77/201 (38%), Gaps = 10/201 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L  +  +   ++GTL+   RL   +L AW   VYV +FR++P ++VIF +
Sbjct: 17  ILSGLRFTLLLTLTSTVGGVLLGTLLAVARLYGGRLAAWPATVYVNLFRSLPLVLVIFLI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  +   L     S        + +  ++F        ++I          +        
Sbjct: 77  YFILPYALQAITGSERPIVLGAMGSAFITFILFEAAYFSEIIRAGVG---SVGPGQYAAG 133

Query: 209 RHFHEKTGKALP-LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF- 266
                + G+ L  ++    F       L  + + +Q      VL   +F+G +T   +  
Sbjct: 134 SALGLRHGQVLRKVILPQAFRNMLPVLLTQVIVIFQETALVYVLSLTDFLGAATKIAQRD 193

Query: 267 -----MSLYIALSCYTAAFIA 282
                M + +AL  +  +F A
Sbjct: 194 NRLVEMYMLVALVFFVISFTA 214


>gi|260575386|ref|ZP_05843385.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022306|gb|EEW25603.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 256

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 96/238 (40%), Gaps = 9/238 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             VL        + L      +     I V + VLG+ L++               A P 
Sbjct: 22  WCVLNLRWDWLPKYLPMIGQGIWRTIWILVVTTVLGMALAVPLGL--AQAVGPWFLAAPA 79

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYT 277
               T +      L L  L + L    P   QF +I  S++ P     +    +AL+   
Sbjct: 80  RVFCTVIRGTPLLLQLWLLYFGLGSLFP---QFPWIKDSSLWPYLRQAWPYAVLALTLSF 136

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           A +  E++R     V RGQ+EAA A+G+      R + LPQA+   +P L  + +  LK 
Sbjct: 137 AGYEGEVMRGAFKGVQRGQLEAARAMGMPRLTILRRIWLPQALHRALPTLGGEVVLQLKA 196

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + L   +   D+ SV   +   T    E +L+   +Y++++ ++ L    L  ++  +
Sbjct: 197 TPLVATITVVDIYSVASRVRQDTFIVYEPLLLLAVVYMAITGLLVLAFRWLEHRVPAR 254



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 31/93 (33%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  G   T W+     +    +   +G  +      +A   RV+  V R  P L+ 
Sbjct: 35  YLPMIGQGIWRTIWILVVTTVLGMALAVPLGLAQAVGPWFLAAPARVFCTVIRGTPLLLQ 94

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           ++ LY  + S+ P            +L      
Sbjct: 95  LWLLYFGLGSLFPQFPWIKDSSLWPYLRQAWPY 127


>gi|220913268|ref|YP_002488577.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219860146|gb|ACL40488.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 216

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 18/223 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                  T+  +A   V + VLG +L+      +R       +    +Y+       L T
Sbjct: 11  YWEGFLRTLFLSAVSGVIALVLGTLLA-----AARVSPVAALRGFSTVYVEVLRNTPL-T 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +        L        QF            ++  IALS YTAAFIAE VRSG+ +VP 
Sbjct: 65  IAFFFAAIVLPRLGVKFEQFE-----------IAAIIALSTYTAAFIAEAVRSGVNSVPV 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA ++G+   +   L++LPQA+R++IPPL +  + L+KNSS+A A    +L   G 
Sbjct: 114 GQAEAARSIGMGFGQVLSLIILPQALRTVIPPLINILIALVKNSSVAGAFFVLELFGYGR 173

Query: 355 TIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            + N  G A I ++L   F YL L++ + +  + +  K+A+  
Sbjct: 174 QLANANGDAVITVLLGTAFFYLLLTVPLGILASTVERKVAIAR 216



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 35/76 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T +L+    + A ++GTL+ A R+S    +     VYVEV RN P  +  FF 
Sbjct: 11  YWEGFLRTLFLSAVSGVIALVLGTLLAAARVSPVAALRGFSTVYVEVLRNTPLTIAFFFA 70

Query: 149 YKSVLSVLPIPDHSIV 164
              +  +    +   +
Sbjct: 71  AIVLPRLGVKFEQFEI 86


>gi|39938943|ref|NP_950709.1| ABC-type amino acid transport system, periplasmic component [Onion
           yellows phytoplasma OY-M]
 gi|39722052|dbj|BAD04542.1| ABC-type amino acid transport system, periplasmic component [Onion
           yellows phytoplasma OY-M]
          Length = 609

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 81/222 (36%), Gaps = 14/222 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL-----PLL 222
                         + T   + +   ++G + +   T + +   H K    +       L
Sbjct: 383 WHQIKETFPSYLEGLKTTLILAIDGLIIGFLFATSYTLIKNSQSHNKIILNINKGTTYFL 442

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               F++ G+P      L +           F             +    L   + A I 
Sbjct: 443 DTFFFILKGIPVAAQAMLVFY-GIGYLCKDLFEIKR-------LYAGLFVLVLNSLANIT 494

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            I+   +  + +GQ+EAA +LG+  ++    ++ PQ ++  +P +  Q++  +K+SS   
Sbjct: 495 VILMQNIKFLDKGQIEAAHSLGMNQKQVFFSIIFPQTLKRSVPFIIQQFITNIKDSSFFA 554

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            +G A+L     + +  T   I   ++    YLS+  +  L 
Sbjct: 555 IIGIAELSWQAQSNMGSTFNPILPFVMISCFYLSIISIANLL 596


>gi|85704451|ref|ZP_01035553.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
 gi|85670859|gb|EAQ25718.1| polar amino acid uptake family ABC transporter, permease protein
           [Roseovarius sp. 217]
          Length = 237

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 15/229 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L    L +  +      + V G++L              T   LP   ++   
Sbjct: 17  ITWVPFILKGFGLNLVMSVLAMALATVSGVILGFMQISPV------TLIRLPAKLVTNLF 70

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
                 ++L A+ + + F   + G     G   + P+++      S    A ++EI+R  
Sbjct: 71  RNSPWLVILFAIMFLVPFQITLPG-----GDKVMVPDWLKATFGFSLPVMANVSEILRGA 125

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P GQ E+A +L  T  +  R ++LPQ +R ++PP  + Y  L   + +A  +G  +
Sbjct: 126 VASIPSGQWESAESLAFTRGQTLRHIILPQCIRRMLPPWMNWYALLTLMTPMAAILGVNE 185

Query: 349 LVSVGGTIINQTGQ----AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +      +   G      I   L  M I+  +   I++   RL  + A
Sbjct: 186 ALGNTQAAMEAAGSRPEFLIPFYLFLMTIFFVVIYPISICTRRLEKRFA 234



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 40/82 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   IL GF     ++   M  AT+ G ++G  ++S   L+    ++   +FRN P LV
Sbjct: 18  TWVPFILKGFGLNLVMSVLAMALATVSGVILGFMQISPVTLIRLPAKLVTNLFRNSPWLV 77

Query: 144 VIFFLYKSVLSVLPIPDHSIVL 165
           ++F +   V   + +P    V+
Sbjct: 78  ILFAIMFLVPFQITLPGGDKVM 99


>gi|295107460|emb|CBL05003.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Gordonibacter pamelaeae 7-10-1-b]
          Length = 220

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 105/231 (45%), Gaps = 27/231 (11%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L    +T+  +A   + S VLG V+S+      R  + +  + +  +YI  
Sbjct: 8   FTWVNIRFLLQGLGMTLLISALAILCSVVLGAVISVM-----RTSNSRVLRGVATVYIEI 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F                   + P+L    F       P   +  +A + +T+A +AEIVR
Sbjct: 63  FK------------------NTPLLLWIMFTFFVAQLPPIGAAVLAFTLFTSASVAEIVR 104

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVG 345
            GL +VP GQ EAA + G +  +   L++LPQA+R+++P L SQ++  +K++S L  A+ 
Sbjct: 105 GGLASVPFGQYEAAKSQGFSTVQTYLLIILPQALRNMVPALLSQFVTTIKDTSYLWGAMA 164

Query: 346 FADLVSVGGTIINQTGQAIEIILIW---MFIYLSLSIMIALFMNRLNAKIA 393
             +L+  G  ++N     ++I  I+     IY  +   ++  +     ++ 
Sbjct: 165 LQELMGRGMILMNSYNSTVQIFAIFGIMALIYFVVCFTLSQIVRAYQRRLK 215



 Score = 53.4 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 66/195 (33%), Gaps = 4/195 (2%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +           +L G   T  ++   ++ + ++G ++   R S ++++  +  VY+E+F
Sbjct: 4   IAALFTWVNIRFLLQGLGMTLLISALAILCSVVLGAVISVMRTSNSRVLRGVATVYIEIF 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMF----LNNRGLSFPTLTMDTNAKIFVF 192
           +N P L+ I F +                 F       +   GL+         AK   F
Sbjct: 64  KNTPLLLWIMFTFFVAQLPPIGAAVLAFTLFTSASVAEIVRGGLASVPFGQYEAAKSQGF 123

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S V   +L +    L         + +  +  +++L   +    L+     L        
Sbjct: 124 STVQTYLLIILPQALRNMVPALLSQFVTTIKDTSYLWGAMALQELMGRGMILMNSYNSTV 183

Query: 253 QFNFIGGSTVSPEFM 267
           Q   I G      F+
Sbjct: 184 QIFAIFGIMALIYFV 198


>gi|330427592|gb|AEC18926.1| polar amino acid ABC transporter, inner membrane subunit
           [Pusillimonas sp. T7-7]
          Length = 223

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 39/124 (31%), Positives = 71/124 (57%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              + +  +A+     A+  EIVR+G+ ++P+GQ+EA +AL L+  +  R V+L  A+++
Sbjct: 87  WSPYTAALVAMVFNLGAYATEIVRAGIESIPKGQIEAGLALNLSRLEVFRFVVLKPALKA 146

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           I P LTSQ++ L+  SS+   +   DL SV   + ++T ++ EI ++   IYL L++   
Sbjct: 147 IYPALTSQFILLMLASSVVSVISADDLTSVAANLQSETFRSFEIYIVVTGIYLLLTLAFT 206

Query: 383 LFMN 386
               
Sbjct: 207 FVFR 210


>gi|320174702|gb|EFW49834.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella dysenteriae CDC 74-1112]
          Length = 132

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/125 (37%), Positives = 77/125 (61%)

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            + L  +TAA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS
Sbjct: 1   MLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTS 60

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + +NL+KNS++A  +G  D+ +  G +++ +  A E        Y+ ++ +I L M  + 
Sbjct: 61  EMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAIIMLVMTLVE 120

Query: 390 AKIAL 394
            K+ L
Sbjct: 121 RKVRL 125


>gi|271501472|ref|YP_003334498.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           dadantii Ech586]
 gi|270345027|gb|ACZ77792.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech586]
          Length = 240

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 2/214 (0%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF--GLPTLVLIALKYQL 244
           A   +F  ++ +++              T +   +   +  ++F      L++    +  
Sbjct: 20  ALTTLFLTMVALLIGALVGAAVAAAKLSTRRFWRVAGETYSIVFRGIPELLIIYLFYFGG 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                 +G++    G    P F+   +A+   +A++  E+ R+  +AV  G++EAA A+G
Sbjct: 80  SGVLTQIGRWFGAEGFIELPPFLIGALAIGLISASYQGEVYRAARLAVSSGELEAASAMG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++H +    +LLPQ MR  +P L++ +   LK+S+L    G  +L+         T    
Sbjct: 140 MSHWRIGWRILLPQVMRFALPGLSNVWQMSLKDSALVSVTGIIELMRASQMAAGSTRDYF 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              L    +YL L++       RL   ++   ++
Sbjct: 200 LFYLAGAALYLILTVFSNAAFARLERMLSQPYRR 233


>gi|327461006|gb|EGF07339.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 219

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S + G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTIFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 SGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSRKLSQRWA 215



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|171318960|ref|ZP_02908090.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171095845|gb|EDT40789.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 241

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 8/170 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  +    I     + ++ L +  +F  P+L            P   ++  AL+    A
Sbjct: 57  PLRVLLLAFIGFFRAIPVLMLIFWTYFLLPML-------LHVDVPGLATVVCALALIGGA 109

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++A  V +G++A   GQ +A ++LGLT  +  R VLLPQA+R + P   +Q++ L+K++S
Sbjct: 110 YLAHAVHAGIVAAGDGQWQAGLSLGLTRWQTVRYVLLPQAIRIMTPSFVNQWVALVKDTS 169

Query: 340 LAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRL 388
           LA  VG  +L  V   + N+       I L    +YL L   +      L
Sbjct: 170 LAYIVGVPELSFVATQVNNRLMVYPAPIFLFVAALYLVLCTSLDGAARWL 219


>gi|145635026|ref|ZP_01790732.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           PittAA]
 gi|145267634|gb|EDK07632.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           PittAA]
          Length = 227

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 6/202 (2%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   L+LF T L    ++   +A+ L      L  G P LV   L Y            +
Sbjct: 26  IAFCLALFLTFLLSMENKWVKRAVNL---YLTLFTGTPLLVQFFLIYAGP--GQFQWIID 80

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 +S  +    +AL+  +AA+  ++    + A+P+GQ E+  ALGL   +    +L
Sbjct: 81  SPLWYVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTL-KIL 139

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +P A++  +P  +++ + + K ++LA  +   D++     +      A+ I  I   IYL
Sbjct: 140 IPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYL 199

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            ++ +  L + +L  K+   E+
Sbjct: 200 IITGIATLLLRKLEKKVLAFER 221


>gi|116250818|ref|YP_766656.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255466|emb|CAK06542.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 230

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 15/227 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+     IFVFS ++G + ++   R      E       L+     +  G+
Sbjct: 12  WDILGAVPVTLAMALGIFVFSTIVGSLFAMVEYRRVPLLRE-------LVVAYKVVFKGV 64

Query: 233 PTLVLIALKYQLHFDKPVLGQF-----NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           P +++I L Y   +  P   QF             +P +++L +AL+   AAF AE+V+ 
Sbjct: 65  PMVIVIFLAY---YGLPPTLQFLTSLVGIDYNGHSTPNWITLIVALTACVAAFQAEVVKG 121

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L +   GQ +AA +LG    +  R V+LPQ + + IP L +  + ++K  SL  A+   
Sbjct: 122 ALNSFDNGQADAAYSLGYKRSQLFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVV 181

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D+ +            +E  LI + IY+ ++ ++    +R+   + +
Sbjct: 182 DIFAQSQLTAALNFYYLEAFLIAVVIYMVIAYIVTYAADRMERALRV 228


>gi|188532630|ref|YP_001906427.1| GltJ protein [Erwinia tasmaniensis Et1/99]
 gi|188027672|emb|CAO95523.1| GltJ protein [Erwinia tasmaniensis Et1/99]
          Length = 255

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 8/206 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT------GKALPLLYIST 226
              +S    T   +    +FS +L ++L       SR             +  PLL    
Sbjct: 17  QWIISGFLTTFYVSLIASLFSTLLVVLLLAMRLSPSRIAQGAVSAFVSLFRNTPLLVQLL 76

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F  F     +  + ++ +    P       I  S ++PEF+ +   L  +TAAF+ E V+
Sbjct: 77  FWYFAAWGALPQSWRFYIGDIHPWATFPGDI--SWLTPEFLCVVWGLGLFTAAFLVEEVQ 134

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +GL +VP+GQ EAAI+ G +     R +LLPQA+ +   P+  QYLNL+K SSLA  +GF
Sbjct: 135 AGLNSVPKGQREAAISQGFSRWTLLREILLPQALTNAWQPVAGQYLNLMKLSSLATGIGF 194

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMF 372
           ++L      I +    A E   +   
Sbjct: 195 SELTYQVSRIESYNAHAFEGFAVGTA 220



 Score = 59.2 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 3/152 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ TF+++    + +T++  L+ A RLS +++       +V +FRN P LV +
Sbjct: 16  LQWIISGFLTTFYVSLIASLFSTLLVVLLLAMRLSPSRIAQGAVSAFVSLFRNTPLLVQL 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
            F Y +    LP      +   G              +       V+   L     L   
Sbjct: 76  LFWYFAAWGALPQSWRFYI---GDIHPWATFPGDISWLTPEFLCVVWGLGLFTAAFLVEE 132

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
             +       G+    +         L  ++L
Sbjct: 133 VQAGLNSVPKGQREAAISQGFSRWTLLREILL 164


>gi|209547105|ref|YP_002279023.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538349|gb|ACI58283.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 229

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 5/210 (2%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFD 247
           + + S VLG  +++    +++       K     Y + F   G P L+ + L Y  L   
Sbjct: 23  LLLISVVLGFAIAIGL-AIAQVGKNPVLKMAAKGYCTFF--RGTPLLIQLWLIYYGLGSY 79

Query: 248 KPVLGQFNFIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            P +          +  E      +AL+   AA+  EI+R  L+AVPRG++EAA A G+ 
Sbjct: 80  LPFIPGLRSSFLWPIMREGLFFAAVALTLNFAAYQGEILRGTLLAVPRGELEAAKAAGMR 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R + LP+A+R  +P    + +  LK + +  +V   DL      I   T    E 
Sbjct: 140 PGMVLRRIWLPRAIRIGLPTFAGEVILQLKATPIVFSVTVMDLYGAAYKIRQDTLLVYEP 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++    Y++L+ +I     R    +  + 
Sbjct: 200 LIVVAAFYVALTFVITQVFQRFENAVPTRR 229



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 59/153 (38%), Gaps = 3/153 (1%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G + T  L    ++    I   +   ++  N ++    + Y   FR  P L+
Sbjct: 8   PYRELLLQGALLTCMLLLISVVLGFAIAIGLAIAQVGKNPVLKMAAKGYCTFFRGTPLLI 67

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            ++ +Y  + S LP             +   GL F  + +  N   +    + G +L++ 
Sbjct: 68  QLWLIYYGLGSYLPFIPGLRSSFLWPIM-REGLFFAAVALTLNFAAYQGEILRGTLLAVP 126

Query: 204 ATRL--SRHFHEKTGKALPLLYISTFLIFGLPT 234
              L  ++    + G  L  +++   +  GLPT
Sbjct: 127 RGELEAAKAAGMRPGMVLRRIWLPRAIRIGLPT 159


>gi|29828503|ref|NP_823137.1| glutamate transporter permease [Streptomyces avermitilis MA-4680]
 gi|29605606|dbj|BAC69672.1| putative glutamate ABC transporter permease [Streptomyces
           avermitilis MA-4680]
          Length = 214

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++  L +VL        R     + +A    +++      L  L    L     F
Sbjct: 19  VELTVYASALALVLGFLMASF-RVAPVASLRAFGTAWVTVLRNTPLTLLFFAVLLGLPRF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                          V P  +   +AL CYT+AFI E +RSG+  VPRGQ EAA +LG+T
Sbjct: 78  GL-------------VLPFEVFAVLALGCYTSAFICEALRSGINTVPRGQGEAARSLGMT 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +   +V+LPQA RS+I P+ S  + L KNS++A A    +L+    T+       +  
Sbjct: 125 FEQTLSVVVLPQAFRSVISPVGSTLIALAKNSAIAGAFSVNELLGTYKTLSELGYNIVWT 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+   N L  +  +  
Sbjct: 185 FVWIAVGYLIITLTISAIFNFLERRWGVAR 214



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T  L       A ++G L+ + R++    +      +V V RN P  ++ F +
Sbjct: 11  FAKGFLGTVELTVYASALALVLGFLMASFRVAPVASLRAFGTAWVTVLRNTPLTLLFFAV 70

Query: 149 YKSVLSV 155
              +   
Sbjct: 71  LLGLPRF 77


>gi|86138598|ref|ZP_01057171.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. MED193]
 gi|85824658|gb|EAQ44860.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. MED193]
          Length = 268

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 13/210 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + V G  L+     ++++ +    +     +I  FL  G P  +     Y L  +   
Sbjct: 48  VLAVVTGFFLANLL-AVAKNSNSSWARKPAEWFI--FLFRGSPLFIQFFFAYSLFLNLKS 104

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F       +S  +    I L   TAA+ AEI    L ++PRG +EAA A GLT    
Sbjct: 105 VSSFF----DPLSSAWAGALIVLFLNTAAYSAEIFYGALQSIPRGDIEAADAYGLTGWSR 160

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAI 364
            R V+ P  MR   P  T++ + L   ++L    GF       D +     + ++T    
Sbjct: 161 FRKVMWPTTMRLAWPAYTNEAIFLFHATTLVFVSGFPAWRQKGDALYYAKYLADKTFNPF 220

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               I  F ++ L+++I  F   +N ++  
Sbjct: 221 VPYPILAFYFILLTLVIIFFFGLINKRLNR 250


>gi|297156742|gb|ADI06454.1| putative glutamate ABC transporter permease protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 215

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       +A    +++      L  L LI           V+ Q  F G S     +  
Sbjct: 40  RVSPIPPLRAFGTAWVTLLRNTPLTLLFLITFF--------VMPQILFPGTS----PYKL 87

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL CYT+ FI E VRSG+  VP GQ EAA +LG+T  +  R+++LPQA R++IPPL+
Sbjct: 88  AVGALGCYTSTFICEAVRSGIGTVPIGQAEAARSLGMTFFQTLRMIILPQATRTVIPPLS 147

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S ++ L KNS++A A    +L SV   + ++      I L     YL ++  I+     L
Sbjct: 148 SIFIALTKNSAIAGAFSVTELFSVSKLLSDKGYPIGWIFLWIAVAYLVITFSISGLFRLL 207

Query: 389 NAKIALKE 396
             ++ +  
Sbjct: 208 ERRMEVSR 215


>gi|296129396|ref|YP_003636646.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
 gi|296021211|gb|ADG74447.1| polar amino acid ABC transporter, inner membrane subunit
           [Cellulomonas flavigena DSM 20109]
          Length = 218

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 14/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L          A++ + +    +V+ L    + R     + +A    Y        L  
Sbjct: 9   NLPAYLTGFRLTAQLTLVAGAGALVIGLVVAAM-RVSPLGSLRAFAAAYTELLRNMPLTL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +          F   VL QF    G  +   + +  + L+ YT+AF+AE VRSG+ AV  
Sbjct: 68  I--------FFFAVLVLPQF----GVILPLGYWTAVVCLTAYTSAFVAEAVRSGINAVGV 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA A+GLT  ++   V+LPQA+R++IPPL +  + L KN+S+A      +LV+ G 
Sbjct: 116 GQAEAARAIGLTFGQSLTTVILPQAVRTVIPPLINVIIALTKNTSVAAGFAVVELVASGR 175

Query: 355 TIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  Q     + +++     YL +++      N L  K+A   
Sbjct: 176 RLAQQNPADVVLVLVGVALFYLVVTVPAGQLANLLERKVAFAR 218



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 29/68 (42%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L GF  T  L       A +IG +V A R+S    +      Y E+ RN+P  ++ FF
Sbjct: 12  AYLTGFRLTAQLTLVAGAGALVIGLVVAAMRVSPLGSLRAFAAAYTELLRNMPLTLIFFF 71

Query: 148 LYKSVLSV 155
               +   
Sbjct: 72  AVLVLPQF 79


>gi|218513115|ref|ZP_03509955.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli 8C-3]
          Length = 122

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 1/123 (0%)

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
            TAA+ AEI+R  + +VP GQ EAA ALG+    A R ++LPQA    + P  ++ + L+
Sbjct: 1   NTAAYQAEILRGAIESVPHGQHEAAAALGIHKVIAFRKIVLPQAFIVALRPYGNEIILLI 60

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           K S++   +   DL+       ++T    +  L     YL++   +      +  ++   
Sbjct: 61  KGSAVVAIITVLDLMGETRYAFSRTFDY-QTYLWAAIFYLTIVEALRHLWAWIERRLTRH 119

Query: 396 EKK 398
            K+
Sbjct: 120 LKR 122


>gi|161524793|ref|YP_001579805.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189350453|ref|YP_001946081.1| polar amino acid transporter permease [Burkholderia multivorans
           ATCC 17616]
 gi|160342222|gb|ABX15308.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia multivorans ATCC 17616]
 gi|189334475|dbj|BAG43545.1| polar amino acid transport system permease protein [Burkholderia
           multivorans ATCC 17616]
          Length = 240

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 2/166 (1%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
            +  PLL    F  FG+ +L+  +    L+     + +   +  +  S EF++ ++ LS 
Sbjct: 59  FRNTPLLVQLLFWYFGVASLLPDSWTAWLNAG--HVWRAGPLALAWPSFEFVAGWVGLSA 116

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           YTAAF+AE   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  Q +NL+
Sbjct: 117 YTAAFVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIALPPLFGQIMNLV 176

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           KNSSLA+A+G A+L      +  +T +      I   +Y++    I
Sbjct: 177 KNSSLAMAIGVAELSYASRQVETETFKTFAAFGIATLLYVATVAAI 222



 Score = 39.5 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 59/165 (35%), Gaps = 4/165 (2%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +     Y   +  GF+ T  LA +  + A I G L+   R +    +      YV  FRN
Sbjct: 2   FGLAPKYLGWLGQGFLLTLGLAAASAVAAAIGGLLLAVLRHARVAPLRAAAAAYVVAFRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
            P LV + F Y  V S+LP    +  L  G       L+    + +  A     S     
Sbjct: 62  TPLLVQLLFWYFGVASLLPDSWTAW-LNAGHVWRAGPLALAWPSFEFVAGWVGLSAYTAA 120

Query: 199 VLS---LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            ++       R  R        AL L  + +     LP  V IAL
Sbjct: 121 FVAEECEAGLRGVRRAQHDAAAALGLTPLQSLRYVVLPQAVRIAL 165


>gi|262278836|ref|ZP_06056621.1| glutamate/aspartate transport system permease GltJ [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259187|gb|EEY77920.1| glutamate/aspartate transport system permease GltJ [Acinetobacter
           calcoaceticus RUH2202]
          Length = 280

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 104/221 (47%), Gaps = 10/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLP 233
              + T    F+ +F+LG +L +  T  ++      + + +  + +PL+    F  F  P
Sbjct: 56  FTMVWTAIIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFP 115

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                 L   +      +    +          +    AL  YTAA ++E +R+G+  V 
Sbjct: 116 E----FLPDSISAGSGDVVAGGWWKNLLNQQPAVVGVFALGLYTAARVSEHIRAGINTVS 171

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +  
Sbjct: 172 TGQKFAASAVGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 231

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 232 KTMREETSQDIIILILSTPVYLIITYSIKFVMAWIEKRMAV 272



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 3/117 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            +    ++   +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FR
Sbjct: 40  AHAEAPTWLQMLGSGVFTMVWTAIIAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFR 99

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           NIP +V +FF        LP    +     G  +                 +F    
Sbjct: 100 NIPLIVQLFFWAFVFPEFLPDSISAGS---GDVVAGGWWKNLLNQQPAVVGVFALGL 153


>gi|15900608|ref|NP_345212.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
 gi|111658697|ref|ZP_01409340.1| hypothetical protein SpneT_02000205 [Streptococcus pneumoniae
           TIGR4]
 gi|14972184|gb|AAK74852.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae TIGR4]
          Length = 225

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/228 (19%), Positives = 89/228 (39%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L      +     I + S +L ++       +    H +  + L  LY+    
Sbjct: 8   VLFQGNNLLRILQGLGVTIGISILSVLLSMMFRTVMGIIM-TSHSRIIRFLTRLYLEFIR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        + L + ++F        N  G         S  I  + +  A + ++VR  
Sbjct: 67  IMP-----QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P+ Q E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  +
Sbjct: 115 ITSLPKHQFESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVE 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           +  VG  II+     I      I    + +Y ++   I+     L   
Sbjct: 175 VTKVGQQIIDSNRLTIPTASFWIYGTILILYFAVCYPISKLSTHLEKH 222



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 37/68 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + +  T++G    S ++++ ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVLLSMMFRTVMGIIMTSHSRIIRFLTRLYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|307131971|ref|YP_003883987.1| Octopine transport system permease occQ [Dickeya dadantii 3937]
 gi|306529500|gb|ADM99430.1| Octopine transport system permease protein occQ [Dickeya dadantii
           3937]
          Length = 240

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 1/175 (0%)

Query: 225 STFLIFGLPTLVLIALKYQLHFD-KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            + +  G+P L++I L Y         +G++    G    P F+   +A+   +A++  E
Sbjct: 59  YSIVFRGIPELLIIYLFYFGGSGVLTQVGRWFGADGFLELPPFLIGALAIGLISASYQGE 118

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + R+  +AV  G++EAA A+G++  +    +LLPQ MR  +P L++ +   LK+S+L   
Sbjct: 119 VYRAARLAVNSGELEAARAIGMSRWRIGVRILLPQVMRFALPGLSNVWQMSLKDSALVSV 178

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            G  +L+         T       L    IYL L++       RL   ++    +
Sbjct: 179 TGIVELMRASQMAAGSTRDYFLFYLAGAAIYLILTVFSNTAFARLEQTLSQPYHR 233


>gi|258645925|ref|ZP_05733394.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403294|gb|EEW96841.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 225

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T  +I + S +  ++  LF   L      +  K +   Y+    I        + L + 
Sbjct: 23  WTTVEISLLSVIGSVIFGLFTG-LFMTLQNRAAKLISRFYLEFIRIMP-----QLVLLFI 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F        +  G       F +  I    + AA + ++VR  LI++P+ Q E+A AL
Sbjct: 77  AYFGITRAFGISLSG-------FTASVIVFILWGAAEMGDLVRGALISIPKSQYESAEAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+ R+  R +++PQ++R ++PP  + +  ++K +SL V +G  +++  G  II      
Sbjct: 130 GLSRRQMYRFIIIPQSLRRLLPPAINLFTRIIKTTSLVVLIGVVEMLKTGQQIIEANRYT 189

Query: 364 IE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
                  I     F+Y      ++     L  K
Sbjct: 190 APDAALWIYAAIFFLYFLACYPLSRMAAYLEKK 222



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 35/92 (38%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
           + S    +L G   T  ++   +I + I G   G      N+    I R Y+E  R +P 
Sbjct: 11  EGSNGLRLLSGLWTTVEISLLSVIGSVIFGLFTGLFMTLQNRAAKLISRFYLEFIRIMPQ 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           LV++F  Y  +     I          +F+  
Sbjct: 71  LVLLFIAYFGITRAFGISLSGFTASVIVFILW 102


>gi|170739980|ref|YP_001768635.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168194254|gb|ACA16201.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 227

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 14/203 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F             +   T  ++   + VLG+++ +    + R         L   Y+
Sbjct: 3   YRFDFEALAEYWPDFLMGALTTLEMTAVATVLGLLIGIL-CAVGRRSPRAWLSRLCGGYV 61

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T  +   P L+ +   Y           F         P   +  + L     A+  EI
Sbjct: 62  ET--VRNTPYLIQVFFLY-----------FGLASAGLRLPVLTAAILTLVVNVGAYTGEI 108

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+G+  +P GQ+EAA ALGLT  +  R ++L  A+  + P LTSQ++ ++  SS+   +
Sbjct: 109 VRAGMDTIPPGQVEAAEALGLTRAQIYRDIILRPALERVYPALTSQFVLMMLASSVTSQI 168

Query: 345 GFADLVSVGGTIINQTGQAIEII 367
              +L +V   I + T ++ E  
Sbjct: 169 SAEELTAVANNITSITFRSFETY 191



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 37/78 (47%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + + + Y    L+G + T  +     +   +IG L   GR S    ++ +C  YVE  R
Sbjct: 6   DFEALAEYWPDFLMGALTTLEMTAVATVLGLLIGILCAVGRRSPRAWLSRLCGGYVETVR 65

Query: 138 NIPPLVVIFFLYKSVLSV 155
           N P L+ +FFLY  + S 
Sbjct: 66  NTPYLIQVFFLYFGLASA 83


>gi|319792872|ref|YP_004154512.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
 gi|315595335|gb|ADU36401.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus EPS]
          Length = 223

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 14/229 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                    ++ + + VLG+V+++F     +       + +   
Sbjct: 1   MNYQFQFDAVFAAWPLLLKGTWITVQLSLIATVLGLVVAIF-CAWGKTSGPGWLRFIVNA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   +I   P LV +               F             +  +A+     A+  
Sbjct: 60  YIE--VIRNTPFLVQLFFF-----------FFALPAIGLRWSPQTAALVAMVVNLGAYAT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++P+GQ+EA  AL L   +  R V++  A+++I P LTSQ++ L+ +S++  
Sbjct: 107 EIIRAGIESIPKGQIEAGRALNLKPWEIFRFVIIKPALKAIYPALTSQFILLMLSSAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL SV   + +QT ++ EI ++   IYL+L++  +     +  +
Sbjct: 167 VISADDLTSVAANLQSQTFRSFEIYIVVAAIYLALALAFSAMFKLIYKR 215



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +  +    +L G   T  L+    +   ++      G+ S    + +I   Y+EV RN
Sbjct: 7   FDAVFAAWPLLLKGTWITVQLSLIATVLGLVVAIFCAWGKTSGPGWLRFIVNAYIEVIRN 66

Query: 139 IPPLVVIFFLYKSVLSV 155
            P LV +FF + ++ ++
Sbjct: 67  TPFLVQLFFFFFALPAI 83


>gi|119963944|ref|YP_948499.1| glutamate permease [Arthrobacter aurescens TC1]
 gi|119950803|gb|ABM09714.1| Glutamate permease [Arthrobacter aurescens TC1]
          Length = 216

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 105/222 (47%), Gaps = 14/222 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            + V S ++ +++      + R       +   + Y+       L T+
Sbjct: 8   LPEYWDGFLRTLYLSVISGIIALIVGTLLAAM-RVSPVAALRGFSMFYVEVARNTPL-TI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +       L        QF            ++  IALS YTAAFIAE VRSG+ +VP G
Sbjct: 66  IFFFAAIVLPRLGVKFEQFE-----------VAAIIALSSYTAAFIAEAVRSGVNSVPVG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ++G+T  +    ++LPQA+R++IPPL +  + L+KNSS+A A    +L   G  
Sbjct: 115 QAEAARSVGMTFTQVLGFIVLPQAVRTVIPPLINILIALVKNSSVAGAFFVLELFGYGRQ 174

Query: 356 IINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + N  G Q + I+L   F YL +++ + L  + +  K+A+  
Sbjct: 175 LSNDYGNQVLWILLGVAFFYLLITVPLGLLAHFVERKVAIAR 216



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 35/76 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GF+ T +L+    I A I+GTL+ A R+S    +      YVEV RN P  ++ FF 
Sbjct: 11  YWDGFLRTLYLSVISGIIALIVGTLLAAMRVSPVAALRGFSMFYVEVARNTPLTIIFFFA 70

Query: 149 YKSVLSVLPIPDHSIV 164
              +  +    +   V
Sbjct: 71  AIVLPRLGVKFEQFEV 86


>gi|317494654|ref|ZP_07953066.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917256|gb|EFV38603.1| inner membrane binding protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 244

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 101/207 (48%), Gaps = 11/207 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   + S + G+  ++  T L        G    +L         +P    I L +  +F
Sbjct: 27  ALTLLMSLIAGLASAILGTLLGVALAMSRGWLGAVLATVLGFFRAIPV---IMLIFWTYF 83

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P++   +        PE  ++  AL+   ++++A  + +G+ AV RGQ +A ++LGL 
Sbjct: 84  LLPIVFGVDI-------PEITTVVCALALIASSYLAHAIAAGIHAVGRGQWQAGLSLGLN 136

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
             +    V+LPQA+R ++P   +Q+++L+K++SLA  VG ++L  +   + N++    +E
Sbjct: 137 RWQVLGNVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVSELTFLATQVNNRSMVYPME 196

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           + +    +Y  + + + L  N L+ + 
Sbjct: 197 VFMFVAGVYFVMCLALDLAANHLSRRF 223


>gi|160899823|ref|YP_001565405.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160365407|gb|ABX37020.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 266

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 56/230 (24%), Positives = 100/230 (43%), Gaps = 16/230 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +    F  +          L     +        L + L L A RL+R    +  +   
Sbjct: 50  EARFWEFFAWPTTWAFLAKGLLGTLASSAMAAVIALSLGLVLLAGRLAR---PRIVRWPS 106

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +  I    + G PTL+LI + +                       +  L + +   TAA 
Sbjct: 107 IAVIEF--LRGTPTLLLIYVCF-----------LVLPAAGIKLGTYWMLTLPIGLSTAAV 153

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AE+ R+G++AVPRGQ +AA +LGLT  +  R V+ PQA+R I+P L +Q + ++K+++ 
Sbjct: 154 VAEVYRAGVLAVPRGQTDAARSLGLTEVQVFRFVVFPQALRYIVPALVAQLVIVVKDTTF 213

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              V + +L+     +I      + + L+   +Y  ++  I+    RLN 
Sbjct: 214 GYIVTYGELMQNAKVLIANYHALVPVYLVVAVLYCLVNYAISRASRRLNR 263



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 1/89 (1%)

Query: 82  DSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
                 A L  G + T   +    + A  +G ++ AGRL+  ++V W     +E  R  P
Sbjct: 58  AWPTTWAFLAKGLLGTLASSAMAAVIALSLGLVLLAGRLARPRIVRWPSIAVIEFLRGTP 117

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            L++I+  +  + +         +L   +
Sbjct: 118 TLLLIYVCFLVLPAAGIKLGTYWMLTLPI 146


>gi|322373223|ref|ZP_08047759.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
 gi|321278265|gb|EFX55334.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
          Length = 230

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 100/194 (51%), Gaps = 7/194 (3%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             +    +K  + L   Y+  F++   P +VL+ L +   +  P    +          +
Sbjct: 42  AWASLSKDKALENLAKGYV--FILRCTPPIVLLFLVF---YGVPEFLNWWLGLDINNWSK 96

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + + +    +A I+E+ ++   A+P+GQ+EA +++GLT  +A   ++ PQA +  +P
Sbjct: 97  LIFVLVTMVLLFSALISEVFKAAYQAIPKGQLEAGLSIGLTPEQAFVRIVAPQAFKVALP 156

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIAL 383
            +T+  LNL+++++LA  +GF D++  G  +I++     ++E       +Y  ++++++L
Sbjct: 157 NITTAILNLMRDAALAYTIGFIDVMGKGNLLISRHLGNYSLETYTAVALVYWGIALILSL 216

Query: 384 FMNRLNAKIALKEK 397
                  ++++K +
Sbjct: 217 ISRMTEQQLSIKAR 230


>gi|221370065|ref|YP_002521161.1| Polar amino acid ABC transporter, inner membrane subunit precursor
           [Rhodobacter sphaeroides KD131]
 gi|221163117|gb|ACM04088.1| Polar amino acid ABC transporter, inner membrane subunit precursor
           [Rhodobacter sphaeroides KD131]
          Length = 370

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 57/291 (19%), Positives = 119/291 (40%), Gaps = 20/291 (6%)

Query: 112 TLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFL 171
            L G      +  +  +  VY+        L +    +     V      S+ +   MF 
Sbjct: 93  MLFGLYPYDEHWRLVLMMAVYLGTV----VLSLWPRCWNLRFLVPLWIVSSLSIGILMFG 148

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFL 228
              GL +   +      + +  F   +++ +       L R       + + +++I    
Sbjct: 149 GVLGLRYVPTSEWGGLPLTMLLFTGTVLIGMPVAVLLALGRRAPLPVARGVSVVFIEALR 208

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              L T++ +A          V     F+       + + + + ++ + A + AE++R G
Sbjct: 209 GVPLITILFVA----------VNVFPLFLPAGVEVNKLLRITVGIAIFFACYQAEVIRGG 258

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L A+P GQ EAA +L L++ + TR ++LPQA+R  +P +T+  +  +KN+S  + +G  D
Sbjct: 259 LQAIPTGQYEAAASLSLSYWQTTRRIILPQALRISLPAITNHIIAAMKNTSFVIIIGLFD 318

Query: 349 LVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++    ++         IE  L    +YL     ++L+  ++   IA   
Sbjct: 319 ILTATTAVMQDPLWRKFYIEAYLFVAAVYLFFGYALSLYARQVEKWIASGR 369


>gi|317054118|ref|YP_004118143.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952113|gb|ADU71587.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 229

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 3/193 (1%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSP 264
            L +    +  KA+   Y  T L  G+P LVL+ L +  +        +   +  S    
Sbjct: 35  ALGKQSGIRWVKAIVTPY--TLLARGIPDLVLMLLVFYSVPALLNSGLENIGLNYSVEFS 92

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F++  + L     A++ E  R  L  +P  ++EAA A G T R     ++LPQ +R  +
Sbjct: 93  PFIASLVTLGFIFGAYMTETFRYALTNIPHSEIEAAQAFGFTGRAIFLRIILPQLIRLAL 152

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P  T+ +L L+K ++LA  +G  D++         TG+     L+    YL+++++    
Sbjct: 153 PGFTNNWLVLVKATALASLLGLQDIMFSAKGAAESTGKPFTFYLLAAGFYLAVTLLSVAA 212

Query: 385 MNRLNAKIALKEK 397
           ++RL+ +  L  +
Sbjct: 213 LHRLSLRYTLAVR 225


>gi|218658873|ref|ZP_03514803.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli IE4771]
          Length = 216

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 15/180 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
                +T+  +      SF LGI+L+L      R       + + +++I       L T+
Sbjct: 39  WGGLLVTLVLSFVGIAVSFPLGIILAL-----GRRSQMPVIRTVCIVFIEVVRGVPLITV 93

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + +A           +    F+       + +   I +S + +A++AE++R GL A+P+G
Sbjct: 94  LFMA----------SVMLPLFLPAGWTVDKLLRAIIGVSIFASAYMAEVIRGGLQAIPKG 143

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E A +LGL + +  RLV++PQA++ +IP + + ++ + K++SL   +   DL+ +   
Sbjct: 144 QFEGADSLGLGYWQKMRLVIMPQAIKLVIPGIVNTFIGMFKDTSLVSIISMFDLLGIVRL 203



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G + T  L+F G+  +  +G ++  GR S   ++  +C V++EV R +P + V+F  
Sbjct: 38  LWGGLLVTLVLSFVGIAVSFPLGIILALGRRSQMPVIRTVCIVFIEVVRGVPLITVLFMA 97

Query: 149 YKSVLSVLPIPD 160
              +   LP   
Sbjct: 98  SVMLPLFLPAGW 109


>gi|86360226|ref|YP_472115.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284328|gb|ABC93388.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 251

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 104/217 (47%), Gaps = 9/217 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF 230
           +   L       +        + +L  +    A  +S  F        PLL +  T L++
Sbjct: 11  DYWLLLLIGQYPNGPLGGLANTLILSALSIALAFPISILFAMARLSKAPLLRWPVTALVY 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               + L+ L    +F  P+L   +        P F+++   L  Y +AF++E+VR+G++
Sbjct: 71  FTRGVPLLMLILWSYFLVPLLTGADV-------PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+A+ ALG ++  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL 
Sbjct: 124 ALGPGQMDASRALGHSYVGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMN 386
                + NQ   Q  ++ LI   +Y ++   +  F N
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220



 Score = 45.3 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 27/64 (42%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+   +  A  I  L    RLS   L+ W     V   R +P L++I + Y
Sbjct: 26  LGGLANTLILSALSIALAFPISILFAMARLSKAPLLRWPVTALVYFTRGVPLLMLILWSY 85

Query: 150 KSVL 153
             V 
Sbjct: 86  FLVP 89


>gi|170702189|ref|ZP_02893095.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170132898|gb|EDT01320.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 240

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 8/206 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTF 227
                  LT+   A   + + V G++L++         R     +    +  PLL    F
Sbjct: 11  WLWQGFLLTLGLAAASALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQLLF 70

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG+ +L+       L+    +      +  +  S EF++ ++ LS YTAAF+AE   +
Sbjct: 71  WYFGVASLLPDTWITWLNARHEL--SAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEECEA 128

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  QY+NL+KNSSLA+A+G A
Sbjct: 129 GLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFGQYMNLVKNSSLAMAIGVA 188

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFI 373
           +L      +  +T +      +   +
Sbjct: 189 ELSYASRQVETETFKTFAAFGVATVL 214



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 62/159 (38%), Gaps = 4/159 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  LA +  + AT+ G L+   R +    V  +   YV  FRN P LV 
Sbjct: 8   YLSWLWQGFLLTLGLAAASALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--- 201
           + F Y  V S+LP    +  L     L+   L+    + +  A     S      ++   
Sbjct: 68  LLFWYFGVASLLPDTWITW-LNARHELSAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEEC 126

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               R  R        AL L  + +     LP  V IAL
Sbjct: 127 EAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165


>gi|302525506|ref|ZP_07277848.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
 gi|302434401|gb|EFL06217.1| ectoine/hydroxyectoine ABC transporter, permease EhuD [Streptomyces
           sp. AA4]
          Length = 215

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 13/222 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L        T  ++F+ +    +VL      L R       +A+   Y++      L  
Sbjct: 7   NLDLFGPFFLTTIELFLIAGACSLVLGTILAML-RVSPVPVLRAIGTTYVTVLRNTPLTL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +        L F  P+L              F +  +AL+ YT+AFI E+VRSG+  VP 
Sbjct: 66  V-----FAFLVFAYPLLD-------IVKIDYFPTAAVALTIYTSAFICEVVRSGINTVPL 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA  ALGL+  +    ++LPQA+RS++PPL S  + LLKN+++A     A+  ++  
Sbjct: 114 GQAEAGRALGLSSGQILGGIVLPQALRSVVPPLVSMLIALLKNTTIASGFSVAEAGAIRQ 173

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  +    +  +L     ++ L  +++L    L  + ++  
Sbjct: 174 YVSERGDNQMIALLWVALGFIILVSVLSLVQRSLEKRWSVAR 215



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           F+ T  L       + ++GT++   R+S   ++  I   YV V RN P  +V  FL  + 
Sbjct: 15  FLTTIELFLIAGACSLVLGTILAMLRVSPVPVLRAIGTTYVTVLRNTPLTLVFAFLVFAY 74

Query: 153 LSVLP 157
             +  
Sbjct: 75  PLLDI 79


>gi|237808727|ref|YP_002893167.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
 gi|237500988|gb|ACQ93581.1| polar amino acid ABC transporter, inner membrane subunit [Tolumonas
           auensis DSM 9187]
          Length = 222

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 14/181 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ +++ V GI+L       +R    +  +    +Y+   LI   P +V +   +  
Sbjct: 23  VTLELTLYATVGGILLGTLGAA-ARTSRSRPIRLSAGIYVE--LIRNTPFIVQLFFIF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           + +  IA++    A+ AEI+R+G+ A P+GQ EA   LG
Sbjct: 78  ---------FGLPAMGVKLTAWQAGLIAMTVNLGAYSAEILRAGIEATPKGQWEAGRTLG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +    ++LP A + I   L  Q + ++  SS+   +   +L      I +++  + 
Sbjct: 129 LTRFQIFTRIVLPPAFQRIYSSLVGQCIIVMLGSSVISQISVEELTFSANFIQSRSFLSF 188

Query: 365 E 365
           E
Sbjct: 189 E 189



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 39/89 (43%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  G + T  L     +   ++GTL  A R S ++ +     +YVE+ RN P +V
Sbjct: 12  PYLPELGQGLLVTLELTLYATVGGILLGTLGAAARTSRSRPIRLSAGIYVELIRNTPFIV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +FF++  + ++             M +N
Sbjct: 72  QLFFIFFGLPAMGVKLTAWQAGLIAMTVN 100


>gi|330831199|ref|YP_004394151.1| arginine ABC transporter permease ArtQ [Aeromonas veronii B565]
 gi|328806335|gb|AEB51534.1| Arginine ABC transporter, permease protein ArtQ [Aeromonas veronii
           B565]
          Length = 216

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 7/191 (3%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            LS           + + S V G+VL+L  +             +  L   T LI GLP 
Sbjct: 1   MLSLLLDAAWMTLGLALASLVGGMVLALAFSAAELSKKRALVWPVATL---TTLIRGLPE 57

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+++   Y           F   G       F    +ALS   A++  + +R+ L AVP 
Sbjct: 58  LLVVLFIYFGSTQV----LFLITGEYVEFSPFACGVLALSLLFASYATQTLRAALNAVPA 113

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ  AA+ALGL+       ++LPQA R  +P L +Q+L LLK+++L   +G  +++    
Sbjct: 114 GQRLAALALGLSKSHIFFRIVLPQAWRHALPGLGNQWLVLLKDTALVSLIGVNEMMRQAQ 173

Query: 355 TIINQTGQAIE 365
                T Q   
Sbjct: 174 MASASTYQPFT 184


>gi|124026133|ref|YP_001015249.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           NATL1A]
 gi|123961201|gb|ABM75984.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Prochlorococcus marinus str.
           NATL1A]
          Length = 299

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 76/237 (32%), Positives = 116/237 (48%), Gaps = 16/237 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+     +       P        P     ++       +    + K+ V S +L     
Sbjct: 32  LIRTGLGFNFSWLFKPASFALAEHPLPYTSSDSYAWALFIGWLNSLKVIVSSLILATFFG 91

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI---- 257
                 +R         +   YI+  +I   P L+ +   Y + F       F  I    
Sbjct: 92  TLIG-FARTGTNSLLGLISAGYIT--IIRQTPLLLQLMFWYFVGFLGLKDNMFIQIKNIF 148

Query: 258 ---------GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                     G T S EF++L   LS +T+A+IAE++R G+++V RGQ EA  +LG++ R
Sbjct: 149 NISNKGIEFSGLTFSSEFLALLFGLSIFTSAYIAEVIRGGILSVSRGQWEAFRSLGISER 208

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           K    ++LPQA+ +IIP LTSQYLNL KNS+LA+AVG++D+ ++  TIINQTG+AIE
Sbjct: 209 KGLIRIILPQALPAIIPGLTSQYLNLAKNSTLAIAVGYSDIYAINDTIINQTGRAIE 265



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           +   + +Q  ++++   +F   +NN+  N+ ++ L     +L + A F + +  +PYTS 
Sbjct: 3   KNQKLFLQFGISIIFFGLFGILINNLTINLIRTGLGFNFSWLFKPASFALAEHPLPYTSS 62

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SYA A+ +G++N+  +  S +I AT  GTL+G  R   N L+  I   Y+ + R  P L
Sbjct: 63  DSYAWALFIGWLNSLKVIVSSLILATFFGTLIGFARTGTNSLLGLISAGYITIIRQTPLL 122

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           + + F Y               L   MF+  + +   +      + +   S  L ++  L
Sbjct: 123 LQLMFWYFVGFLG---------LKDNMFIQIKNIFNISNKGIEFSGLTFSSEFLALLFGL 173


>gi|330902473|gb|EGH33506.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 192

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 13/189 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 8   FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 54

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 55  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPF 114

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 115 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 174

Query: 383 LFMNRLNAK 391
             + R    
Sbjct: 175 WLVKRYEQH 183



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%)

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           +   ++  ++   RLS  + + W   VYVEV R I  LV++F+L+  +            
Sbjct: 1   LLFLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVLLFYLFFILPLFGIRLSPMTT 60

Query: 165 LPFGM 169
              G+
Sbjct: 61  GVLGL 65


>gi|169796308|ref|YP_001714101.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|169149235|emb|CAM87117.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
          Length = 224

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 26/234 (11%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTGK 217
           +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  +
Sbjct: 7   NWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELSR 66

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             PLL    FL +GLP L                              F    I L+   
Sbjct: 67  NTPLLIQLFFLYYGLPKL------------------------GIKIDGFTCGVIGLTFLG 102

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K 
Sbjct: 103 GSYMAEAFRAGLQSVAKGQIDSAKSIGLQPTQIFRYVIFPQALAISIPAIGANCLFLIKE 162

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SS+  A+   +L+ V   +I    +  E + + +  YL + + +++  + L  +
Sbjct: 163 SSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIIAYLIILLPVSILTSYLEHR 216



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 4/89 (4%)

Query: 76  IVPYTSDSSY----ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
           ++ ++ +  Y            + T  ++   +I A I+G +         +++  I + 
Sbjct: 1   MLEFSLNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQF 60

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPD 160
           Y+E+ RN P L+ +FFLY  +  +    D
Sbjct: 61  YIELSRNTPLLIQLFFLYYGLPKLGIKID 89


>gi|284048144|ref|YP_003398483.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
 gi|283952365|gb|ADB47168.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidaminococcus fermentans DSM 20731]
          Length = 263

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 16/217 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                   S  +  VL+L          E+  +     YI  F     P L  I +   +
Sbjct: 30  LAVVSITASLGIASVLALARN-YCTRPAERVFRWAATAYIELF--RNTPLLFWIFIG-TV 85

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P + +   +        F    IAL+ + +A IAEI+R GL A+ +GQ EA  A G
Sbjct: 86  FFPAPGVRRMLGLSSVETKLLFKC-TIALTIFESAIIAEIIRGGLNAISKGQFEAGYAQG 144

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN------ 358
               +    ++LPQA R IIP L SQ + ++K++S    V   +L++    +++      
Sbjct: 145 FNMVQVMWYIILPQAFRKIIPTLMSQVITIIKDTSFLANVATIELMARVNKVLSGAALYN 204

Query: 359 -----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                       +      +Y  ++  ++  +  + A
Sbjct: 205 GTGKINVSDVFVLFGFAALVYFIINYSLSCVVRHVQA 241



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS----ANKLVAWICR 130
           G +    +    + ++ G   T  LA   +  +  I +++   R      A ++  W   
Sbjct: 6   GSIAMLKNPDIVSFLMKGVCFTLLLAVVSITASLGIASVLALARNYCTRPAERVFRWAAT 65

Query: 131 VYVEVFRNIPPLVVIFF 147
            Y+E+FRN P L  IF 
Sbjct: 66  AYIELFRNTPLLFWIFI 82


>gi|312198104|ref|YP_004018165.1| polar amino acid ABC transporter inner membrane protein [Frankia
           sp. EuI1c]
 gi|311229440|gb|ADP82295.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EuI1c]
          Length = 214

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 14/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      + T  ++   SF+L + + +     +R       +A  L+Y+ T        
Sbjct: 7   HLDVFGSGLSTTLQLTALSFLLALGVGVVV-ATARVCPAAPLRAAGLVYVETVRNTPPLV 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+L+ +             +           F+S  + L  YT AF+AE + SG+ +VP 
Sbjct: 66  LILLFV-------------YGLPKTGVRYSLFVSAVLVLGGYTGAFVAEALLSGIRSVPV 112

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA +LGLT     R V+LPQA R+++PPL +    L++N+SLA  +G  +L +  G
Sbjct: 113 GQAEAARSLGLTFTGTLRHVVLPQAFRAVVPPLGALLSALVRNTSLAAPIGVLELTARAG 172

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +       + I L     YL +++ +      +  ++A+  
Sbjct: 173 QLNTSDPSPVWIYLAAAAAYLVVTLPLGGVTRLIERRVAVTR 214



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +      G   T  L     + A  +G +V   R+     +     VYVE  RN PPLV+
Sbjct: 7   HLDVFGSGLSTTLQLTALSFLLALGVGVVVATARVCPAAPLRAAGLVYVETVRNTPPLVL 66

Query: 145 IFFLYKSVLSV 155
           I      +   
Sbjct: 67  ILLFVYGLPKT 77


>gi|218670451|ref|ZP_03520122.1| ABC transporter, membrane spanning protein [Rhizobium etli GR56]
          Length = 198

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 14/195 (7%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +GI + + +    R       K     Y+   LI   P L+ +   Y   F  P L    
Sbjct: 9   VGIAVGI-SCAWVRALGPAWLKPPVTAYVE--LIRNTPFLIQLFFVY---FGLPQL---- 58

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                    E  +  +A+     A+  EI+R+G+ A PRGQ EA  +L +T  +  R V+
Sbjct: 59  ----GLRLSEIEAANLAMIVNLGAYSCEIIRAGIQATPRGQFEAGASLAMTPFQTFRHVV 114

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +  A++ I P L+SQ + ++  S++   V   DL      I ++T ++ E       +YL
Sbjct: 115 VVPALQRIWPALSSQVVIVMLGSAVVSQVAAQDLSFATNFIQSRTFRSFEAYFFSTLVYL 174

Query: 376 SLSIMIALFMNRLNA 390
            L+I++   + R+ A
Sbjct: 175 VLAILLRWMLARIGA 189


>gi|323466465|gb|ADX70152.1| Amino acid ABC transporter, permease protein [Lactobacillus
           helveticus H10]
          Length = 230

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S ++G+ +      L R    K  + +  +Y+  F 
Sbjct: 14  VLFEGSNFARLMAGLWTSIWIAAISLIIGLAIGTIFGIL-RTLPNKIIRFVLRIYLEFFR 72

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        I L Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 73  IVPT-----IVLLYLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEFSDIVRGA 120

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 121 IESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIME 180

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++VG  II    Q        +  +   +Y  L   ++ +  +L  
Sbjct: 181 VINVGQQIIEANNQQYPTGVFWVYGLIFILYFVLDYPLSAWAKKLTK 227



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 42/85 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +I    IGT+ G  R   NK++ ++ R+Y+E FR +P +V+++ +
Sbjct: 24  LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLPNKIIRFVLRIYLEFFRIVPTIVLLYLV 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   +  +    F   
Sbjct: 84  YYILPRTFHVNWPATWMAVLAFSLW 108


>gi|327474723|gb|EGF20128.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
 gi|327490280|gb|EGF22068.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1058]
 gi|328946747|gb|EGG40885.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1087]
          Length = 219

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S + G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTIFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 PGQTEAGLSQGFTQFQILRYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSRKLSQRWA 215



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P L+ IF +
Sbjct: 16  ILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|158423461|ref|YP_001524753.1| polar amino acid ABC transporter permease [Azorhizobium caulinodans
           ORS 571]
 gi|158330350|dbj|BAF87835.1| polar amino acid uptake family ABC transporter permease protein 1
           [Azorhizobium caulinodans ORS 571]
          Length = 252

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 3/241 (1%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
                   +  +   +  +          +     + V S ++ IV+       ++    
Sbjct: 6   EWFRNLYDTTGINLTIVYDAYDRQRFVSGVGMTIYLSVVSILISIVIG-AIGAWAQGSPV 64

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +AL   ++  F       LV I   Y          + +      +        I+L
Sbjct: 65  RAIRALVNGFVVLFRNTPP--LVQIFFFYFGLGQILPRVENDDGMMVQMISNVQWAIISL 122

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           S +  A+  EI RSGL AVPR   EAA ALG T     R VLLP A+R  +P L +  +N
Sbjct: 123 SLFAGAYNVEIFRSGLEAVPRTTSEAAEALGYTRIGVYRHVLLPLALRICLPALNNNLVN 182

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK ++LA A+   + + V   I N +     ++++ + +Y  L  ++   M+R    +A
Sbjct: 183 LLKTTTLAYAIAVPETLYVSKQIWNDSQNVPVMMVVLLLVYTGLVGILVYIMHRWERALA 242

Query: 394 L 394
           +
Sbjct: 243 I 243



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 42/87 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T +L+   ++ + +IG +    + S  + +  +   +V +FRN PPLV IFF 
Sbjct: 31  FVSGVGMTIYLSVVSILISIVIGAIGAWAQGSPVRAIRALVNGFVVLFRNTPPLVQIFFF 90

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           Y  +  +LP  ++   +   M  N + 
Sbjct: 91  YFGLGQILPRVENDDGMMVQMISNVQW 117


>gi|209547001|ref|YP_002278919.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209538245|gb|ACI58179.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 325

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 59/310 (19%), Positives = 120/310 (38%), Gaps = 11/310 (3%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY-KS 151
            +  F LA    + A  +G  +   R         +  V +     I    ++  +   +
Sbjct: 22  ILTIFVLALVAWLTARFLGWAIEDARWRGIYESRRLLLVGLYPPEEIWRTWLMLGILCMA 81

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
           + + +        +   +      +              + S +L IV+S  +  L    
Sbjct: 82  IGAAMIPSLRRFAVAILLAACAGAVLVLAPPGLDRWGGLLLSLMLAIVVSAASLPLGTLL 141

Query: 212 HE-KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              ++ +   L       I  + ++ LI + Y +    P+          +     +   
Sbjct: 142 AFGRSSRNPSLRACCAGYIEVMRSVPLILVVYWIWITVPL------FAPESSMSSLVRGM 195

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + + AA++AE VRSGL AVPRGQ EAA +LG+++   +  ++LPQA+R + P L   
Sbjct: 196 IGYTVFNAAYVAEFVRSGLQAVPRGQREAAQSLGMSNWTVSTDIVLPQAIRFVQPALVGN 255

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            L++   ++L   +G  D +  G  I+   + +    E+ +    +Y  +   I     R
Sbjct: 256 VLDVFNGATLVFIIGLTDFLRAGQMILADPSSSSAVQEVYVFMFAVYFLIGSAITFGARR 315

Query: 388 LNAKIALKEK 397
           + A++    +
Sbjct: 316 MEARMQRSTR 325



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 45/99 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + +  LA      +  +GTL+  GR S N  +   C  Y+EV R++P ++V+++++ +
Sbjct: 119 GLLLSLMLAIVVSAASLPLGTLLAFGRSSRNPSLRACCAGYIEVMRSVPLILVVYWIWIT 178

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
           V    P    S ++   +       ++    + +  +  
Sbjct: 179 VPLFAPESSMSSLVRGMIGYTVFNAAYVAEFVRSGLQAV 217


>gi|222148130|ref|YP_002549087.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221735118|gb|ACM36081.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 223

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 14/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F               +    ++ +   V+GI   + A   +R    K  K     
Sbjct: 1   MHYIFDFSWFGEYYPIILKGVGVTVELTLVGGVVGIAFGI-ACAWARALGPKWIKPPVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  +A+     A+  
Sbjct: 60  YVELIRNTPFLI-------------QLFFIFFGLPSTGLKLSEMEAANLAMIINLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  AL L   +  RL++L  A++ I P L+SQ + ++  S++  
Sbjct: 107 EIIRAGIEATPKGQFEAGTALALRPLQTFRLIILVPALQRIWPALSSQLVIVMLGSAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +   DL      I ++T +A E  +I   +YL L+I +   +  L  +I
Sbjct: 167 QIATEDLTFAANFIQSRTFRAFEAYMISTALYLLLAIGLRQLLALLGRQI 216


>gi|163792348|ref|ZP_02186325.1| ABC polar amino acid transporter, inner membrane subunit [alpha
           proteobacterium BAL199]
 gi|159182053|gb|EDP66562.1| ABC polar amino acid transporter, inner membrane subunit [alpha
           proteobacterium BAL199]
          Length = 227

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 15/222 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      M    ++ +     GI L L    + R F  +    L +L++   ++  LP 
Sbjct: 20  YLPDILWGMIITVEVALAVVATGIALGLLLAAV-RSFRVRPVNVLIVLFVD--VLRALPP 76

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LVLI + Y           F           F  L++ LS   AAF  EI  SG++++ +
Sbjct: 77  LVLILIIY-----------FGLPSVGIRLSGFAVLWLVLSLVLAAFAEEIFWSGILSIRK 125

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EAA + GLT  +    V+LPQA+R  +PPLT++ + + KN++L   +G  +++    
Sbjct: 126 GQWEAARSTGLTFLQTLTHVILPQAVRMTVPPLTNRTIAITKNTALGAVIGVPEILMQAQ 185

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           T  + +G A   +L+    Y+ L + + +    L  + A   
Sbjct: 186 TAQSFSGNATP-LLLGALAYIVLFVPVVVLGRWLETRFAWGR 226


>gi|325067175|ref|ZP_08125848.1| amino acid ABC transporter membrane protein [Actinomyces oris K20]
 gi|326771648|ref|ZP_08230933.1| glutamate permease [Actinomyces viscosus C505]
 gi|326637781|gb|EGE38682.1| glutamate permease [Actinomyces viscosus C505]
          Length = 218

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 8/184 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G   PL  +    +     +  + L   +    P +            P F S+ +AL
Sbjct: 40  RVGPIPPLRALGAAWVTVACNIPNLCLMVLVGLALPHV--------GITIPLFWSVIVAL 91

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
              ++ F+ E VRSG+ +VP+GQ+EAA ALG+      R ++LPQA+   I PL + ++ 
Sbjct: 92  VFSSSGFVCETVRSGINSVPKGQIEAARALGMPFGLIIRGIVLPQALARTIQPLVNIFIA 151

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            L  SSLA A+G  +L +V   I  +    +   L     YL+++         L  ++ 
Sbjct: 152 CLIGSSLAAAIGVVELTAVTQRINQERAAGVITFLTSGLTYLAIAFAATKVGGLLERRLE 211

Query: 394 LKEK 397
              +
Sbjct: 212 FMGR 215


>gi|254456396|ref|ZP_05069825.1| amino acid ABC transporter, permease protein [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207083398|gb|EDZ60824.1| amino acid ABC transporter, permease protein [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 480

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 113/259 (43%), Gaps = 18/259 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            + +  ++    +           L    ++        +LT   +    +F F +G+ L
Sbjct: 237 IVPITLYILLKYVFFYEELIELGKLEALEWVETGAWGGLSLTFIVSFFCLIFCFPIGLFL 296

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           SL      R       K + +  I  +    L T++ ++           +    F+   
Sbjct: 297 SL-----GRRSDFPIIKYISIGMIEFWRGVPLITVLFMS----------SVMFPMFLPED 341

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
               + + + IA+S + AA++AE++R GL A+PRGQ +AA +LG+ + K   LV+LPQA+
Sbjct: 342 MFIDKLVRVIIAISLFEAAYVAEVIRGGLQALPRGQYDAAKSLGMGYWKMHILVILPQAL 401

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV---GGTIINQTGQAIEIILIWMFIYLSL 377
           + +IP + + +L L+K++ L   VG  ++V +     T     G A+E  +    ++  +
Sbjct: 402 KLVIPGIANTFLALVKDTPLIFVVGLLEIVGMLNLAKTNPEWLGFAMEGYVFASVLFFII 461

Query: 378 SIMIALFMNRLNAKIALKE 396
              ++ +   L  K   + 
Sbjct: 462 CYAMSKYSYNLEQKYKTER 480


>gi|49475803|ref|YP_033844.1| amino acid permease [Bartonella henselae str. Houston-1]
 gi|49238610|emb|CAF27851.1| Amino acid permease [Bartonella henselae str. Houston-1]
          Length = 238

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 13/208 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           +  F+ +LG++       + R    K   +L ++Y +      L  ++L           
Sbjct: 44  LTFFATILGLIFGTLL-AMMRLSCTKLLSSLAIIYTTAMRSIPLVMVILWFFV------- 95

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                  FI G+++     S  I  + +  A+ AEI+R+G+ +V +GQ  A  ALG+T+ 
Sbjct: 96  ----LLPFITGTSIGAN-KSALITFTAFETAYFAEIIRAGINSVSQGQKHAGQALGMTYW 150

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +   +V+LPQA R ++P   +Q + L ++++L  A+    L++    + N  G   E  +
Sbjct: 151 QNMYIVILPQAFRDMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIVANNFGVKQEAYI 210

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    Y  +   ++  +  L  KI++  
Sbjct: 211 LAAIFYFVICFTLSQIVLYLQKKISIIR 238



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + + +L F   I   I GTL+   RLS  KL++ +  +Y    R+IP ++VI +
Sbjct: 33  YILSGLLFSVFLTFFATILGLIFGTLLAMMRLSCTKLLSSLAIIYTTAMRSIPLVMVILW 92

Query: 148 LY 149
            +
Sbjct: 93  FF 94


>gi|319776579|ref|YP_004139067.1| arginine transporter subunit [Haemophilus influenzae F3047]
 gi|329124093|ref|ZP_08252640.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus aegyptius ATCC 11116]
 gi|317451170|emb|CBY87403.1| arginine transporter subunit [Haemophilus influenzae F3047]
 gi|327467518|gb|EGF13016.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus aegyptius ATCC 11116]
          Length = 227

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
            K  K+   LY++ F   G P LV   L Y            +      +S  +    +A
Sbjct: 42  NKWIKSAVNLYLTLFT--GTPLLVQFFLIYAGP--GQFQWIIDSPLWFFLSNAWFCAALA 97

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
           L+  +AA+  ++    + A+ +GQ E+  ALGL+  +    +L+P A++  +P  +++ +
Sbjct: 98  LALNSAAYSTQLFHGAVKAIHKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEII 156

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            + K ++LA  +   D++     +      AI I  I   IYL ++ +  L + +L  K+
Sbjct: 157 LVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKV 216

Query: 393 ALKEK 397
              E+
Sbjct: 217 LAFER 221


>gi|50085185|ref|YP_046695.1| glutamate/aspartate ABC transporter membrane protein [Acinetobacter
           sp. ADP1]
 gi|49531161|emb|CAG68873.1| glutamate/aspartate transport protein (ABC superfamily, membrane)
           [Acinetobacter sp. ADP1]
          Length = 233

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 10/219 (4%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            + T    F+ +F LG +L +  T       L    + +  + +PL+    F  F  P L
Sbjct: 11  MIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFWAFVFPEL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
               L   L      +    +      +   +    AL  YTAA ++E +R+G+  V  G
Sbjct: 71  ----LPASLSSGSGEVVAGGWWKNILNNHPAVIGVFALGLYTAARVSEHIRAGINTVSSG 126

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +   T
Sbjct: 127 QKFAASAMGFTTGQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKT 186

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 187 MREETSQDIIILILSTPVYLVITYTIKFIMAWIEKRMAV 225



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V   W A +  + A  +G+L+G  R   NK +A I   YVE+FRNIP +V +FF 
Sbjct: 4   LGSGVVTMIWTAVAAFLIAFFLGSLLGIIRTLPNKPLALIGDTYVEIFRNIPLIVQLFFW 63

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                 +LP       L  G      G  +  +  +  A I VF+  L
Sbjct: 64  AFVFPELLPA-----SLSSGSGEVVAGGWWKNILNNHPAVIGVFALGL 106


>gi|227512390|ref|ZP_03942439.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227084363|gb|EEI19675.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
          Length = 190

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   SF+  ++L LF T L++    K        +IS   + G+P LVL+ + Y    
Sbjct: 3   LYLTAISFIGALILGLFLT-LAQMSRFKLLHWSARAFISF--MRGVPMLVLLFIIYFGFG 59

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                                +  IA +   +AF++E+ RS   AV RGQ EAA +LGL 
Sbjct: 60  AN----------------ALPAAVIAFTINCSAFVSEVFRSSFSAVDRGQWEAAYSLGLP 103

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +R     V+ PQA +  IP L +  L+L K++SLA  +  +++      I       + I
Sbjct: 104 YRTVIAKVIFPQAFKIAIPALGNILLDLFKSTSLAAMITVSEMFMDAKIIAGAYQDYMSI 163

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++   IY     ++ +   +L   +
Sbjct: 164 YIVMAIIYWFFCWLMTVGQTQLEHAL 189



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           + +L     I A I+G  +   ++S  KL+ W  R ++   R +P LV++F +Y   
Sbjct: 2   SLYLTAISFIGALILGLFLTLAQMSRFKLLHWSARAFISFMRGVPMLVLLFIIYFGF 58


>gi|241554229|ref|YP_002979442.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863535|gb|ACS61197.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 222

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 92/232 (39%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +                 I++ +      L        R       KA  ++  
Sbjct: 1   MTFDINVIFNNFPEILSGAWLTIVIWIVTTPAAAALGFLVAVARRFGGVVPDKAFGVV-- 58

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ I L Y             F+G S       +  I LS Y AA+ +EI
Sbjct: 59  -IAVLRGTPFLIQIFLVYYGG---------PFVGLSL--DPIPAGVIGLSIYGAAYFSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG  AVP+G +EA + +GLT  +  R +LLP+    ++PP  +  + L+K +++   +
Sbjct: 107 FRSGFAAVPKGHIEAGLCVGLTQGQIVRRILLPEMTMLVLPPSVNMTIILMKETAVLSII 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L +    I +Q    +E + +    Y +L  +     +    K++   
Sbjct: 167 TVPELTATLSAIGSQQYAFVEALFVLALFYWALVEITGWLGHLAETKLSRFR 218


>gi|139438442|ref|ZP_01771958.1| Hypothetical protein COLAER_00948 [Collinsella aerofaciens ATCC
           25986]
 gi|133775981|gb|EBA39801.1| Hypothetical protein COLAER_00948 [Collinsella aerofaciens ATCC
           25986]
          Length = 277

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 14/231 (6%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
              V  +  F +     F     +   K+ + +  + +VL L    L R    K  + + 
Sbjct: 54  QLSVHYWYFFTHLTTWKFLLAGFEGTVKVALTAGAIALVLGLALM-LGRTSDIKPLQLVC 112

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +    F          +   Y      P              P F  L + ++   A  
Sbjct: 113 RVLTDFFRGVPS-----LLFIYFFFLVLPQYK--------IALPSFWMLTLPVALAAAGV 159

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           +AEI R+G+ AVPRGQ+EAA ALGL+  K T  ++LPQA+R IIP L SQ + ++K++++
Sbjct: 160 LAEIFRAGVNAVPRGQVEAAQALGLSKAKITFKIVLPQAIRFIIPSLISQLVVVVKDTTV 219

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           A  V + DL+     +I      + + L+   IY+ +++ I      ++ K
Sbjct: 220 AYVVSYPDLMQNARVLITNYDALVSVYLVIAVIYILINVAINKAAVYVSHK 270



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L GF  T  +A +    A ++G  +  GR S  K +  +CRV  + FR +P L+
Sbjct: 67  TTWKFLLAGFEGTVKVALTAGAIALVLGLALMLGRTSDIKPLQLVCRVLTDFFRGVPSLL 126

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            I+F +  +           +L   + L   G+         NA
Sbjct: 127 FIYFFFLVLPQYKIALPSFWMLTLPVALAAAGVLAEIFRAGVNA 170


>gi|332040824|gb|EGI77196.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 233

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 6/218 (2%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +    ++   S VL + L++    L+          L   Y + F   G P LV + 
Sbjct: 21  WEGLVITVQLLAGSVVLALSLAVPL-ALAATSRSPWLARLSRGYGAAF--RGTPLLVQLF 77

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L Y        +          +   F    +ALS   AA++AE +R+G++AVP GQ EA
Sbjct: 78  LLYYGVSQFEAVRSSALWW--LLEDAFYCGLLALSLNLAAYMAEDLRAGILAVPIGQKEA 135

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A+ALG++  +  R ++LP A R   P L ++ +  LK ++L   +   DL  V   +   
Sbjct: 136 ALALGMSVHQVNRWIVLPTAWRIATPALGNEVIAQLKATALVSTITVLDLTGVARRLSTA 195

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                + +++   +Y +L+++I L +  +  +     +
Sbjct: 196 AY-TTDALVMAGVVYGALTLLIVLAVRLIERRFGPAGR 232



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 8/140 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G V T  L    ++ A  +   +     S +  +A + R Y   FR  P LV +F LY
Sbjct: 21  WEGLVITVQLLAGSVVLALSLAVPLALAATSRSPWLARLSRGYGAAFRGTPLLVQLFLLY 80

Query: 150 KS--VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT-NAKIFVFSFVLG-----IVLS 201
                   +       +L    +     LS         + +  + +  +G     + L 
Sbjct: 81  YGVSQFEAVRSSALWWLLEDAFYCGLLALSLNLAAYMAEDLRAGILAVPIGQKEAALALG 140

Query: 202 LFATRLSRHFHEKTGKALPL 221
           +   +++R     T   +  
Sbjct: 141 MSVHQVNRWIVLPTAWRIAT 160


>gi|121607338|ref|YP_995145.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121551978|gb|ABM56127.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 236

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 86/233 (36%), Gaps = 17/233 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +                 L++   A   V   ++ + L+       R   +         
Sbjct: 1   MNWDLIAAHWLLFAHGVALSLALTAGTAVLGLLMSVPLAFARHSTRRLCSQPVAA----- 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM----SLYIALSCYTA 278
              TF++ G P LV + L Y        L QF  +  S + P          +  +  T 
Sbjct: 56  --FTFVVRGTPCLVQLYLVYY------GLSQFEAVRNSWLWPWLTNASFCALLTFAINTT 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+   L  +P G++EA  + G++     R + +P  +R  +P   ++ + LL  +
Sbjct: 108 AYTTEILSGALARLPPGEIEAGQSFGMSRWTLVRRIQVPAMLRRALPQYANEIIMLLHMT 167

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA  V   D+      I  +   A E  +    +YL++++++         +
Sbjct: 168 SLAGLVTLLDITGAARFINAEFYLAFEPFITAGALYLAITLVLVRCFGAAENR 220


>gi|296274365|ref|YP_003656996.1| polar amino acid ABC transporter inner membrane subunit [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098539|gb|ADG94489.1| polar amino acid ABC transporter, inner membrane subunit
           [Arcobacter nitrofigilis DSM 7299]
          Length = 265

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 101/249 (40%), Gaps = 17/249 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV++ F+       +            ++   +      +       I  F+ +L  ++ 
Sbjct: 30  LVLLIFVVVITFYFMFKNVSYTFNWDSVYEYRQKFIDGFIMT---IIISFFALILSFIIG 86

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           LF T  +++      +     YI   +I G P LV I + + +           F     
Sbjct: 87  LFFT-YAQNSKLLVLRFFSRFYIE--IIRGTPLLVQILIFFYV-----------FANNLG 132

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               ++   I L+ +  A++ EI+R  + ++   Q E  ++LG+T+ +  R ++ PQA  
Sbjct: 133 FENRYIVGTIILALFAGAYVCEIIRGAIESIEIEQFETGLSLGMTNYQIYRYIIFPQAFN 192

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P LT Q+ +++K+SSL   +  ++       +   T    E  +     YL L+  I
Sbjct: 193 RMLPALTGQFASIIKDSSLLSIISISEFTMNAQEVNAYTYSTFESYIPLAIGYLILTYPI 252

Query: 382 ALFMNRLNA 390
           + +  +L  
Sbjct: 253 SYYTKKLEN 261



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 36/83 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + S   Y    + GF+ T  ++F  +I + IIG      + S   ++ +  R Y+E+ R 
Sbjct: 54  WDSVYEYRQKFIDGFIMTIIISFFALILSFIIGLFFTYAQNSKLLVLRFFSRFYIEIIRG 113

Query: 139 IPPLVVIFFLYKSVLSVLPIPDH 161
            P LV I   +    + L   + 
Sbjct: 114 TPLLVQILIFFYVFANNLGFENR 136


>gi|210611520|ref|ZP_03288940.1| hypothetical protein CLONEX_01130 [Clostridium nexile DSM 1787]
 gi|319936517|ref|ZP_08010932.1| hypothetical protein HMPREF9488_01765 [Coprobacillus sp. 29_1]
 gi|210151967|gb|EEA82974.1| hypothetical protein CLONEX_01130 [Clostridium nexile DSM 1787]
 gi|319808409|gb|EFW04964.1| hypothetical protein HMPREF9488_01765 [Coprobacillus sp. 29_1]
          Length = 224

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     ++  +    V S  LG+++ +  TR +      T        +   ++  +P L
Sbjct: 19  LIGLWTSLRISLIAVVISIFLGLIVGVLMTRKNIILKVFT-------RVYLEIVRIMPQL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ + +              + G  +  E  +  I  S +  A +A++VR  LI++P+ 
Sbjct: 72  VLLFIVFF---------GATRVFGIDIEAE-KASIIVFSFWGTAEMADLVRGALISIPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A ALG++  +    +++PQ +R +IP   +    ++K +SL + +G  +++ VG  
Sbjct: 122 QYESAKALGMSELQIYLHIVMPQTLRRLIPLSMNLITRMIKTTSLIMMIGVVEVLKVGQQ 181

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           II          A  +      +Y      I++F   L  K
Sbjct: 182 IIEANRTSSPNAAFGVFAAVFVLYFIACWPISMFSKYLERK 222



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 35/68 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L+G   +  ++   ++ +  +G +VG      N ++    RVY+E+ R +P LV++F +
Sbjct: 18  LLIGLWTSLRISLIAVVISIFLGLIVGVLMTRKNIILKVFTRVYLEIVRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           +     V 
Sbjct: 78  FFGATRVF 85


>gi|187926112|ref|YP_001892457.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|241665600|ref|YP_002983959.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|187727866|gb|ACD29030.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|240867627|gb|ACS65287.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 257

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 13/219 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             N  L+   LT+       V +   G+  +L   RL     + T     L  +   L+ 
Sbjct: 18  YPNGPLAGAALTLWMALWACVMATAAGVGCALLLDRL-----DATPGLRRLARLLRGLLA 72

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  + ++ L +  +F  P+             PE  ++  AL+   AA+I + + +GL 
Sbjct: 73  TLRAIPVLMLMFWAYFLIPM-------ALGVSVPETATVVAALAAVGAAYITQSMEAGLR 125

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ  AA+ALG++  +A   V+LPQA R ++P L +Q+++ +K++SLA  VG  +L 
Sbjct: 126 AVGAGQRNAALALGMSPPQALLTVVLPQAWRIMLPSLANQWVSTVKDTSLAYIVGVVELS 185

Query: 351 SVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +    + ++T     E+      +Y  L   I    N L
Sbjct: 186 TAASQVNSRTVAYPAEVFGAVAVLYFLLCTGIEALPNWL 224


>gi|222081571|ref|YP_002540935.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726250|gb|ACM29339.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 235

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 10/219 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            LS     +     I   + V+G VL+L AT   R         L  LY+S      +  
Sbjct: 6   MLSELFKALPLTLAITFTAMVVGFVLALIATTF-RVRRIPVVSQLADLYVSYARSVPVVL 64

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            + +A  Y L     +L   +F+  +      ++  + LS Y   +++E++R   +AV R
Sbjct: 65  QLFVAF-YGLPLVVGLLKIDDFVSPN------VAAMLGLSLYHGGYLSEVLRPAYLAVER 117

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ +AA +LG + R+    V+ PQA+   +P   +  + L+ N +L + +G AD+++   
Sbjct: 118 GQHDAADSLGYSFRQKLARVVGPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAH 177

Query: 355 TIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++ +       E  L+   IY  L ++  L +     +
Sbjct: 178 LVMQRDYNQYQFETYLVLAVIYSLLCLVAWLVVRFFEKR 216


>gi|239983305|ref|ZP_04705829.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 214

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++ +L + L        R     + +     +++      L  L    L     F
Sbjct: 19  VELTVYASLLALALGFLMASF-RVAPVASLRFFGTAWVTVLRNTPLTLLFFAVLLGLPRF 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +  Q                 +AL CYT+AFI E +RSG+  VPRGQ EAA +LG+T
Sbjct: 78  GLVLPFQLF-------------AVLALGCYTSAFICEALRSGINTVPRGQGEAARSLGMT 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA RS+I P+ S  + L KNS++A A    +L+    T+       I  
Sbjct: 125 FGQTLSAVVLPQAFRSVIAPVGSTLIALAKNSAIAGAFSVTELLGTYRTLSELGYNIIWT 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+   + +  +  +  
Sbjct: 185 FVWIALGYLIITLTISALFHLMEKRWGVAR 214



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A  +G L+ + R++    + +    +V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASLLALALGFLMASFRVAPVASLRFFGTAWVTVLRNTPLTLLFFAVLLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|158424305|ref|YP_001525597.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158331194|dbj|BAF88679.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 224

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 14/214 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +            L         + +I V +F  G+ +      + R F  +    +  +
Sbjct: 1   MSYTLQFGQIWPYLPRLLEGAVISLQIAVLAFCGGLFIGTLCAAI-RSFGPRWLARIVGV 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+  F     P LV I   Y L+F  P            +   F ++ I ++    A++ 
Sbjct: 60  YVVFFT--NTPQLVQI---YFLYFALP--------DSGILLSSFAAVVIGMTLNAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R+G  +    +MEAA  +G +  +  R V+LP   R + PPL++Q++ +   +S+A 
Sbjct: 107 EIQRAGFESRRVSEMEAAEVMGFSRLQQIRYVILPHVARVLFPPLSNQFIIVTLGTSMAA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
             G  +L      I +QT ++IEI  +   IY+ 
Sbjct: 167 VFGVEELTGEAFNINSQTFRSIEIFSVTAGIYVV 200



 Score = 43.8 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 41/96 (42%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +     Y   +L G V +  +A         IGTL  A R    + +A I  VYV  F
Sbjct: 5   LQFGQIWPYLPRLLEGAVISLQIAVLAFCGGLFIGTLCAAIRSFGPRWLARIVGVYVVFF 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            N P LV I+FLY ++     +      +  GM LN
Sbjct: 65  TNTPQLVQIYFLYFALPDSGILLSSFAAVVIGMTLN 100


>gi|288922651|ref|ZP_06416827.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EUN1f]
 gi|288346009|gb|EFC80362.1| polar amino acid ABC transporter, inner membrane subunit [Frankia
           sp. EUN1f]
          Length = 213

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 31/216 (14%)

Query: 185 TNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
            +    V + +LG VL+          R +   + +T +  PL  +  F+ F LP +   
Sbjct: 18  LSLFSAVGALLLGSVLATMRVSPVPPLRWAGTAYVETVRNTPLTIVFFFVAFVLPQV--- 74

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                                  V   F    +AL+ Y  AF+ E VR+G+  V  GQ E
Sbjct: 75  ---------------------DIVFSFFAFAVMALTIYHTAFVCEAVRAGVNGVEVGQAE 113

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALGLT  ++ RLV+LPQA R+++ PL S    L++NSS+A A G  +L  V   +  
Sbjct: 114 AARALGLTFSQSLRLVILPQAFRNVVQPLGSVGSALIRNSSIAAAFGVQELTGVSQGLAT 173

Query: 359 QT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              G  I I+L  +  YL L++ +A  +  +  ++ 
Sbjct: 174 ANPGDVIAILLAGIVCYLVLTLSLAGAVGVVERRLR 209



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
               GFV T  L+    + A ++G+++   R+S    + W    YVE  RN P  +V FF
Sbjct: 7   VFRDGFVRTLGLSLFSAVGALLLGSVLATMRVSPVPPLRWAGTAYVETVRNTPLTIVFFF 66

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +   +  V  +          + + +   
Sbjct: 67  VAFVLPQVDIVFSFFAFAVMALTIYHTAF 95


>gi|152984149|ref|YP_001349489.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150959307|gb|ABR81332.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 214

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 15/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L F      T   I   + ++G +L +    L       +     LL + 
Sbjct: 1   MFTTSLTANDLLFLLQGAWTTLAITALAMLIGTLLGVVFGLLRALLPRASLPLAALLDVC 60

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 +P L+   L          L  F  I G      F    + L  Y AA+  E+V
Sbjct: 61  ----RSVPLLIQFVL----------LNSFKSILGLD-CSAFAVACLVLGVYAAAYCTEVV 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+++VP     AA +LGL++R+    ++LP A R   P   +  L+++K++SL + +G
Sbjct: 106 RGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIG 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+    TI+ +  + + ++ I   +Y  +S ++A    RL  +
Sbjct: 166 IVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVARLGARLERR 211


>gi|116696424|ref|YP_842000.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113530923|emb|CAJ97270.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 257

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 14/215 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I   +     VL +    L         + L        ++  L  + ++ L +  
Sbjct: 33  LTLWIAALACAGATVLGIALALLLELAPSSVTRVLR------AVLALLRAVPVLMLIFWT 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P+L             E +++ +AL+   AAFIA+ + +G+ A+  GQ +AA+ALG
Sbjct: 87  YFLLPMLAG-------VQVSEVLTVVLALALVGAAFIAQSLHAGIAAIGAGQRQAALALG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-GQA 363
           ++  +A   V+LPQA+R+++P L + ++ L K++SLA  VG ++L ++   +  ++   A
Sbjct: 140 MSRTQALWHVVLPQALRAMLPSLANTWVALTKDTSLAYIVGVSELSTLATQVNGRSMSYA 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            E+      +Y  L +MI         ++    ++
Sbjct: 200 AEVFAAVALLYFVLCVMIEAGAAAALRRLQGSHRR 234


>gi|297559647|ref|YP_003678621.1| polar amino acid ABC transporter inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296844095|gb|ADH66115.1| polar amino acid ABC transporter, inner membrane subunit
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 224

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 14/219 (6%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
            T+       +FSFVLG++L+       R       + L   Y+       L TLVL+  
Sbjct: 17  WTVRLTLLSALFSFVLGVLLTAM-----RVSPVPLLRGLATAYVEGIRSTPL-TLVLLFC 70

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              L+    +      +  S     F    I LS YTA F++E +R+G+  +P GQ+EAA
Sbjct: 71  GLGLNSALGI-----ALADSVAWDVFWWAVIGLSGYTACFVSESLRAGINTIPLGQVEAA 125

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA--VGFADLVSVGGTIIN 358
            +LGLT  +  R++++PQA+R+++ PL S  + L+KN+++A    +G  +       + +
Sbjct: 126 RSLGLTFTQNLRMIVIPQALRTVVGPLGSVLIALIKNTTVASVAGLGVQEASREMKLMFD 185

Query: 359 QTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           Q     +   + +   +L L++    F   L+ ++A+  
Sbjct: 186 QGIAPVLPTFVGFAIGFLILTLPTGYFFGWLSKRVAVVR 224



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 36/85 (42%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T  L     + + ++G L+ A R+S   L+  +   YVE  R+ P  +V+ F    
Sbjct: 14  GFSWTVRLTLLSALFSFVLGVLLTAMRVSPVPLLRGLATAYVEGIRSTPLTLVLLFCGLG 73

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGL 176
           + S L I     V     +    GL
Sbjct: 74  LNSALGIALADSVAWDVFWWAVIGL 98


>gi|241113598|ref|YP_002973433.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240861806|gb|ACS59472.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 223

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 14/223 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F               +    ++     VLGI L +F    +R       K +   
Sbjct: 1   MSYHFEFGWLLEYYPEIIKGILITLELIAIGGVLGISLGIF-CAWARALGPAWLKPVVAT 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  +A+     A+  
Sbjct: 60  YVELIRNTPFLI-------------QLFFIFFGLPSLGFKLSELTAANLAMVVNLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I P L+SQ + ++  SS+  
Sbjct: 107 EIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +   DL      I ++T +A E  ++   IYL L+I++   +
Sbjct: 167 QIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVLAILLRQLL 209


>gi|218460079|ref|ZP_03500170.1| amino acid ABC transporter permease [Rhizobium etli Kim 5]
          Length = 202

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 14/214 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M + +  L+          ++ V    L +V++  A  L R       +AL   YI  F 
Sbjct: 1   MSVWSGYLTLILQGALVTLELTVMGSALALVMAFVAG-LGRLSRFFAVRALATAYIEFF- 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G    V +   Y           F             +  +AL     A+ AE+VR  
Sbjct: 59  -RGTSIFVQLFWVY-----------FVLPFAGLTLTPLQAGVLALGLNVGAYGAEVVRGA 106

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AV R Q EA IAL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D
Sbjct: 107 VKAVGREQSEACIALNLSRYQRMRHVILPQALPLMLPTFCNNAIELLKGTAVVSLISLTD 166

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +      +  QTG  +      + +Y  ++  I+
Sbjct: 167 MTFHAQVVRAQTGNTLVPFAAILILYFLMASAIS 200



 Score = 49.9 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 52/142 (36%), Gaps = 3/142 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y T IL G + T  L   G   A ++  + G GRLS    V  +   Y+E FR     V 
Sbjct: 7   YLTLILQGALVTLELTVMGSALALVMAFVAGLGRLSRFFAVRALATAYIEFFRGTSIFVQ 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           +F++Y  +                + LN        +     A     S      ++L  
Sbjct: 67  LFWVYFVLPFAGLTLTPLQAGVLALGLNVGAYGAEVVRGAVKAVGREQSEAC---IALNL 123

Query: 205 TRLSRHFHEKTGKALPLLYIST 226
           +R  R  H    +ALPL+  + 
Sbjct: 124 SRYQRMRHVILPQALPLMLPTF 145


>gi|23336042|ref|ZP_00121271.1| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
 gi|189438955|ref|YP_001954036.1| amino acid ABC transporter permease [Bifidobacterium longum DJO10A]
 gi|322689599|ref|YP_004209333.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           infantis 157F]
 gi|189427390|gb|ACD97538.1| ABC-type amino acid transport system permease component
           [Bifidobacterium longum DJO10A]
 gi|291516168|emb|CBK69784.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Bifidobacterium longum subsp. longum F8]
 gi|320460935|dbj|BAJ71555.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 224

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+         S  +G+++    T        K       + I    I  +P L
Sbjct: 17  LQGLWVTVWIAGVSVGASIPVGLLVGWLMT-------LKNPVIRAAMRIYLDFIRIMPQL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ L Y   F +      +  G         +  +    +  A + ++VR  L ++P+ 
Sbjct: 70  ALLFLAYY-GFARWFDWNLDATG---------ACVLVFILWGGAELGDLVRGALQSIPKV 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E++  LGL+  +    V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  
Sbjct: 120 QYESSYVLGLSPWQTFSRVILPQAVRRMLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQ 179

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+            I  +  F+Y  +   +++   RL  + +
Sbjct: 180 IIDANRFQFPTGTLWIYGVIFFMYFIVCWPLSIVARRLEKRWS 222


>gi|302542074|ref|ZP_07294416.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302459692|gb|EFL22785.1| glutamate permease [Streptomyces himastatinicus ATCC 53653]
          Length = 215

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 12/188 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       +A    +++      L  L L+A          V+ Q  F G S     F+ 
Sbjct: 40  RVSPIPPLRAFGTAWVTLLRNTPLTLLFLVAFF--------VVPQIFFPGTS----PFVL 87

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +AL CYT+ F+ E VRSG+  VP GQ EAA +LG++  +  RL++LPQA R++IPP++
Sbjct: 88  AMVALGCYTSTFVCEAVRSGINTVPLGQAEAARSLGMSFAQTLRLIVLPQATRTVIPPMS 147

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S ++ L KNS++A A    +L +V   + ++      I L     YL ++  I+     L
Sbjct: 148 SIFIALTKNSAIAGAFSNTELFNVSKLLSDKGFAIGWIFLWIALCYLVITFTISGAFRLL 207

Query: 389 NAKIALKE 396
            +++ +  
Sbjct: 208 ESRLEVAR 215



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +      GF+ T  L  +    A ++G ++   R+S    +      +V + RN P  ++
Sbjct: 7   HLPQFREGFLGTLALTAASAALALVLGIIMAGFRVSPIPPLRAFGTAWVTLLRNTPLTLL 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPF 167
               +  V  +        VL  
Sbjct: 67  FLVAFFVVPQIFFPGTSPFVLAM 89


>gi|89898981|ref|YP_521452.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343718|gb|ABD67921.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 220

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 68/131 (51%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           M+  +A+     A+  EIVR+GL   PRGQ+EAA++L LT  +    V+LP A+  I P 
Sbjct: 90  MASVLAMVLNLGAYACEIVRAGLQTTPRGQLEAAMSLALTPWQTFSRVVLPPALARIWPA 149

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L SQ + ++  S++   +   +L      I ++T ++ E  +I   IYL L+I +   + 
Sbjct: 150 LVSQIIIVMLGSAVCGQISAEELSQAANLISSRTFRSFESYIIVTGIYLLLAIALRQLLY 209

Query: 387 RLNAKIALKEK 397
            +  +     +
Sbjct: 210 WVGPRFIFSSR 220



 Score = 36.1 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 22/55 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
              +L G   T  L     +  T+ GT     RL    ++  +   YVE+ RN P
Sbjct: 13  WPMLLRGLGLTVTLTAFSALLGTLAGTACAWARLHGGPMLKRVVGAYVELVRNTP 67


>gi|317125235|ref|YP_004099347.1| amino acid ABC transporter permease [Intrasporangium calvum DSM
           43043]
 gi|315589323|gb|ADU48620.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Intrasporangium calvum DSM 43043]
          Length = 221

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 12/229 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F      +   +T+       + S ++G ++++      R       +     Y++T  
Sbjct: 4   LFAEYNIFAAFGMTILLTVTAAIGSLLIGTIVAIM-----RLSPVGVFQRTGAFYVNTVR 58

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              L  +++ A     +    V   FNF      +    +  IALS Y AAF+ E +RSG
Sbjct: 59  NTPLTLIIIAA-----NIVMAVNLGFNFSDEFARNNLIWA-VIALSVYHAAFVCEAIRSG 112

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  VP GQ EAA ++GLT  ++ R V+LPQ  R  I PL +  + L KN+++A A+G A+
Sbjct: 113 VNTVPVGQAEAARSIGLTFAQSLRDVVLPQGFRGAITPLGNTLIALTKNTTVATAIGVAE 172

Query: 349 LVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  +   ++  ++   + I LI    ++ L++ + +    L+ ++ +K 
Sbjct: 173 VSGLMKEMLELRSDLILPIFLIVAIGFVILTLPMGMLTTYLSNRLVVKR 221



 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 31/100 (31%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I   F  T  L  +  I + +IGT+V   RLS   +       YV   RN P  ++I   
Sbjct: 10  IFAAFGMTILLTVTAAIGSLLIGTIVAIMRLSPVGVFQRTGAFYVNTVRNTPLTLIIIAA 69

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
              +   L            +      LS         A 
Sbjct: 70  NIVMAVNLGFNFSDEFARNNLIWAVIALSVYHAAFVCEAI 109


>gi|326789990|ref|YP_004307811.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326540754|gb|ADZ82613.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 219

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 16/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
           ++   +          AK+ +    +GIVL++   F   + R++     K +   YI   
Sbjct: 1   MDISAIERYVPLYVEAAKLTLTLGGVGIVLAVLVGFICAMIRYYKIPIAKQVVGAYIE-- 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L    P L+ +   + L++  P L                   I L+    +++AE  RS
Sbjct: 59  LSRNTPLLIQL---FFLYYGLPKL--------GVKISAETCAVIGLTFLGGSYMAEAFRS 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL AV + Q+E+ +++GL   +  + V+LPQA    +P + +  + LLK +S+  AV  A
Sbjct: 108 GLEAVSKSQIESGLSIGLNEWQLIQHVILPQAFAVAMPGIGANIIFLLKETSIFSAVALA 167

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL+ V   +I    +  E + + +  YL + + +++    +  ++ 
Sbjct: 168 DLMFVAKDLIGMYYKTDEALFLLVIAYLIILLPLSILFTWIERRMR 213



 Score = 43.0 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 32/92 (34%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  L   G++ A ++G +    R     +   +   Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLTLGGVGIVLAVLVGFICAMIRYYKIPIAKQVVGAYIELSRNTPLLIQLFFLYYGLPKL 79

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
                       G+                 A
Sbjct: 80  GVKISAETCAVIGLTFLGGSYMAEAFRSGLEA 111


>gi|228478439|ref|ZP_04063043.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|312862893|ref|ZP_07723133.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus vestibularis F0396]
 gi|228249797|gb|EEK09084.1| ABC-type amino acid transport system, permease component
           [Streptococcus salivarius SK126]
 gi|311101753|gb|EFQ59956.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus vestibularis F0396]
          Length = 216

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 94/218 (43%), Gaps = 27/218 (12%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                T+  +  I V S + G +L++      R+      + +  +Y+    +  +P L+
Sbjct: 15  QGMWTTLYLSFFIIVLSTLFGTILAVM-----RNGKNPILRWIASIYVEF--VRNVPNLL 67

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I + + +   K                   +   + + +T+A +AEI+R GL ++  GQ
Sbjct: 68  WIFIIFLVFQLKST----------------AAGITSFTVFTSAALAEIIRGGLNSIDHGQ 111

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGT 355
            EA ++ G  +++    ++ PQA+R ++P + SQ++ ++K++S L   +   +L      
Sbjct: 112 TEAGLSQGFNNKQIFIYIIFPQAIRKMLPSIISQFVTVIKDTSFLYSVIALQELFGKSQI 171

Query: 356 IINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390
           ++    +      +  I    Y  ++  I+ +   L+ 
Sbjct: 172 LMGGYYEPSQIFTLYGIVALAYFVVNFAISSYSRYLSK 209



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    +  G   T +L+F  ++ +T+ GT++   R   N ++ WI  +YVE  RN+P 
Sbjct: 6   SATNLKFLAQGMWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYVEFVRNVPN 65

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 66  LLWIFIIFLVF 76


>gi|23464702|ref|NP_695305.1| permease of ABC transporter system for amino acids [Bifidobacterium
           longum NCC2705]
 gi|227546808|ref|ZP_03976857.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239620788|ref|ZP_04663819.1| permease of ABC transporter system for amino acids [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|312132396|ref|YP_003999735.1| hism4 [Bifidobacterium longum subsp. longum BBMN68]
 gi|322691560|ref|YP_004221130.1| amino acid ABC transporter permease [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|23325267|gb|AAN23941.1| permease of ABC transporter system for amino acids [Bifidobacterium
           longum NCC2705]
 gi|227212770|gb|EEI80651.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Bifidobacterium longum subsp. infantis ATCC 55813]
 gi|239516364|gb|EEQ56231.1| permease of ABC transporter system for amino acids [Bifidobacterium
           longum subsp. infantis CCUG 52486]
 gi|311772684|gb|ADQ02172.1| HisM4 [Bifidobacterium longum subsp. longum BBMN68]
 gi|320456416|dbj|BAJ67038.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 224

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 18/215 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   S    I + L    L         +A   +Y+    I  +P L L+ L Y 
Sbjct: 21  WVTVWIAGVSVGASIPVGLLMGWLM-TLKNPVIRAAMRIYLDFIRI--MPQLALLFLAYY 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F +      +  G         +  +    +  A + ++VR  L ++P+ Q E++  L
Sbjct: 78  -GFARWFDWNLDATG---------ACVLVFILWGGAELGDLVRGALQSIPKVQYESSYVL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +    V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  II+     
Sbjct: 128 GLSPWQTFSRVILPQAVRRMLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQIIDANRFQ 187

Query: 364 IE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  I  +  F+Y  +   +++   RL  + +
Sbjct: 188 FPTGTLWIYGVIFFMYFIVCWPLSIVARRLEKRWS 222


>gi|171317737|ref|ZP_02906919.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171097087|gb|EDT41940.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 244

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   SF +G++L + A  L +         L   Y +          +L+A     
Sbjct: 28  LTLGVAAASFCVGVLLGI-AGALGKLSRHTPLAWLARFYTTLVRALPELLCLLLAFYAVA 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              + VL +   +        F+   ++L     A++ +I R+ L+ VP GQ+EAA A G
Sbjct: 87  PAVESVLHRSGVVSDGFAFDPFVVAALSLGFIQGAYLTDIFRAALVNVPVGQIEAAHAYG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQA 363
           ++  +    V LP A+R  +P + + +LN  K++S    +G F DL+         T   
Sbjct: 147 MSPWQTLTRVRLPIAVRLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHY 206

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   L+   ++L LS+        L        ++
Sbjct: 207 VFFYLVSAALFLLLSMTSTGLFATLERYANRGTRR 241


>gi|300697250|ref|YP_003747911.1| amino acid ABC transporter permease [Ralstonia solanacearum
           CFBP2957]
 gi|299073974|emb|CBJ53511.1| amino acid ABC transporter, permease protein [Ralstonia
           solanacearum CFBP2957]
          Length = 262

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +     L    L++       V S   G+ L++      R           L      L 
Sbjct: 27  YERATLLHAAGLSLRVMLGTVVLSLAAGVGLTMLLISPRRWIAR-------LAQGFVALT 79

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              PTLV +   + +       G  ++   + ++P F ++ I LS + AAF AE +R+G+
Sbjct: 80  RNTPTLVQLCCAFLVVNTLITQGLAHWGLANPLAPLFWAVAI-LSLHKAAFHAEALRAGI 138

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP   +EAA +LG   R+    V LP A+R+ +P L +  + L+K SSLA A+   +L
Sbjct: 139 EAVPPAMLEAAASLGFGARERLWRVQLPLALRAALPSLMNNTVELVKASSLASAIAVGEL 198

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 I  Q G A+E +++ +  Y  ++  +     RL  ++ +
Sbjct: 199 TYSALMIWTQRGNALECMVLLLLFYGIVTYAMHAGGVRLERRLRM 243


>gi|295109249|emb|CBL23202.1| ABC-type polar amino acid transport system, ATPase component
           [Ruminococcus obeum A2-162]
          Length = 162

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +   ++ E  R G++++  GQ E A A+G+TH +    V+LPQA+R+I+P + +  +  
Sbjct: 1   MHHCCYV-EFFRGGILSIDPGQTEGAKAIGMTHVQTMINVILPQALRNIMPQIGNNLIIN 59

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +K++ +   +G  +L      +        E   I M IYL
Sbjct: 60  IKDTCVLSIIGTVELFYTTKGVAGAFYTYFESFTIAM-IYL 99


>gi|88800374|ref|ZP_01115940.1| amino acid ABC transporter, permease protein [Reinekea sp. MED297]
 gi|88776951|gb|EAR08160.1| amino acid ABC transporter, permease protein [Reinekea sp. MED297]
          Length = 218

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 18/229 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     + +    L    +T+D +A+   F F +   L        +       + L   
Sbjct: 1   MDFNLMVDVTPLLLKAAWVTIDVSARSLFFGFFVACGLVFM-----QSLRFAPVRWLARG 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S   I G P  V + L +                               +    A+++
Sbjct: 56  YVSA--IRGTPYFVQLLLVFYGGPSI-----------GFRLDPLTCGVFVGAFNIGAYMS 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E +R  + +V  GQ EA+ +LG    +    ++LPQA   +I  L    + ++KNSSL  
Sbjct: 103 EAIRGSIESVDSGQAEASRSLGFGKAQTLISIVLPQAAPLMIRSLGVLAIVVVKNSSLIS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   +L      +I  T + +EI  I   +Y+ +   +   +     +
Sbjct: 163 IISVVELTYQAQRLIGSTYKPLEIFTISALMYIVIVYAVMGIIELAYRR 211


>gi|306831556|ref|ZP_07464714.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978463|ref|YP_004288179.1| amino acid ABC transporter permease [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|304426341|gb|EFM29455.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178391|emb|CBZ48435.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 226

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 3/208 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L    +LF   L R +  K      ++Y++         L+L      
Sbjct: 18  PVTLGIMVVSILLSFFPALFL-ALGRIYKVKGVTGFSVIYLAFIRSTPAILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +L    F             YI     T   ++EI+RS ++ V +GQ+EAA A+
Sbjct: 77  PSLINQLLKATGF--NIFDINPIYYAYIIFGLMTTGSLSEIIRSAILTVDKGQLEAAQAI 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +A   ++ PQA+R  +P L +  +NL+K +SL   +   D+ ++           
Sbjct: 135 GLSTSQAYIRIVFPQAIRQALPNLCNLVINLVKGTSLVFVMTVKDITAIAKIEAAYGYHY 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E   +   IY+ +  +I      L  +
Sbjct: 195 FESYFVIFIIYIVICGLIQYGFKFLEKR 222



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ +      +  GR+   K V     +Y+   R+ P +++I F Y
Sbjct: 14  LSGIPVTLGIMVVSILLSFFPALFLALGRIYKVKGVTGFSVIYLAFIRSTPAILLILFFY 73

Query: 150 KSVLSV 155
               S+
Sbjct: 74  SLFPSL 79


>gi|312862941|ref|ZP_07723181.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus vestibularis F0396]
 gi|311101801|gb|EFQ60004.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus vestibularis F0396]
          Length = 216

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 94/215 (43%), Gaps = 27/215 (12%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+  +  I V S + G +L++      R+      + +  +Y+    +  +P L+ I 
Sbjct: 18  WTTLYLSFFIIVLSTLFGTILAVM-----RNGKNPILRWIASIYVEF--VRNVPNLLWIF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + + +   K                   +   + + +T+A +AEI+R GL ++  GQ EA
Sbjct: 71  IIFLVFQLKST----------------AAGITSFTVFTSAALAEIIRGGLNSIDHGQTEA 114

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIIN 358
            ++ G  +++    ++ PQA+R ++P + SQ++ ++K++S L   +   +L      ++ 
Sbjct: 115 GLSQGFNNKQIFIYIIFPQAIRKMLPSIISQFVTVIKDTSFLYSVIALQELFGKSQILMG 174

Query: 359 QTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390
              +      +  I    Y  ++  I+ +   L+ 
Sbjct: 175 GYYEPSQIFTLYGIVALAYFVVNFAISSYSRYLSK 209



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    +  G   T +L+F  ++ +T+ GT++   R   N ++ WI  +YVE  RN+P 
Sbjct: 6   SATNLKFLAQGVWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYVEFVRNVPN 65

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 66  LLWIFIIFLVF 76


>gi|227890102|ref|ZP_04007907.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849546|gb|EEJ59632.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 225

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T+  I V S ++G+ L      L R    +  K +  +Y+  F +  +PT+VL+ L Y 
Sbjct: 23  WTSVWIAVLSLIIGLALGALFGVL-RTSKSRLVKVIFRIYLEFFRM--VPTVVLLFLFYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +  QFN        P  +   IA + + +A  ++IVR  LI+VP+ Q E+ +AL
Sbjct: 80  I-----LPRQFNL-----NWPASVMAVIAFALWVSAEFSDIVRGTLISVPKIQRESGLAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +    VLLPQA +  +P   +    ++K +SL + +   D+++VG  I+    Q 
Sbjct: 130 GLNKWQLFIYVLLPQAFQLELPATINLATRVIKTTSLLMMISVMDVINVGQQIVEANNQT 189

Query: 364 -----IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +  F+Y  +   ++L+  RL+ +
Sbjct: 190 NPNGVFWVYGLIFFLYFIVDYPLSLWAKRLSKR 222



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   + W+A   +I    +G L G  R S ++LV  I R+Y+E FR +P +V++F  
Sbjct: 18  LLGGLWTSVWIAVLSLIIGLALGALFGVLRTSKSRLVKVIFRIYLEFFRMVPTVVLLFLF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   + V+    F   
Sbjct: 78  YYILPRQFNLNWPASVMAVIAFALW 102


>gi|213691641|ref|YP_002322227.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523102|gb|ACJ51849.1| polar amino acid ABC transporter, inner membrane subunit
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320457728|dbj|BAJ68349.1| amino acid ABC transporter permease component [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 224

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+         S  +G+++                +A   +Y+    I  +P L
Sbjct: 17  LQGLWVTVWIAGVSVGASIPVGLLVGWLM-----TLKNPVIRAAMRIYLDFIRI--MPQL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ L Y   F +      +  G         +  +    +  A + ++VR  L ++P+ 
Sbjct: 70  ALLFLAYY-GFARWFDWNLDATG---------ACVLVFILWGGAELGDLVRGALQSIPKV 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E++  LGL+  +A   V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  
Sbjct: 120 QYESSYVLGLSPWQAFSRVILPQAVRRMLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQ 179

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+            I  +  F+Y  +   +++   RL  + +
Sbjct: 180 IIDANRFQFPTGTLWIYGVIFFMYFIVCWPLSIVARRLEKRWS 222


>gi|217977865|ref|YP_002362012.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylocella silvestris BL2]
 gi|217503241|gb|ACK50650.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylocella silvestris BL2]
          Length = 384

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 14/262 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF--VLGIVL 200
           ++     +  L+ +       V+ F +      +  P +  D    IFV     ++G+V+
Sbjct: 129 LLWLDAARRNLAAILFFGVYPVVAFLLLHGAPSIGLPRVASDLWGGIFVSLLVAIVGMVV 188

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           SL    L       +  AL +   S   +     ++ +                 F+  +
Sbjct: 189 SLPFGVLLALGRRSSLPALSIACASFIELVRGVPIITVLFMANTMLPL-------FVPEN 241

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                 +   I ++ + +A++AE+VR GL A+P GQ E A ALGL   +  RLV+LPQA+
Sbjct: 242 LAPDRLLRPLIGVALFASAYMAEVVRGGLQAIPSGQFEGAEALGLGRWQTQRLVILPQAL 301

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT-----IINQTGQAIEIILIWMFIYL 375
           R++IP + + ++ L K+++L   VG  D +    +     +      A          Y 
Sbjct: 302 RAVIPGVVNNFIALFKDTTLVAVVGIFDFLRTVDSARLDPVWAGPTIATTGYAFAAMFYF 361

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
                ++ +   +  + + + +
Sbjct: 362 VFCFAMSRYSLFVERRFSHERR 383


>gi|126434726|ref|YP_001070417.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. JLS]
 gi|126234526|gb|ABN97926.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. JLS]
          Length = 292

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  L+V     +                         L     T+   A   V + +LG 
Sbjct: 28  ITALIVWVVYSRLDAKGQLTAAKWEPFLTPNLWTTYVLPGVQGTLTAAAVSIVLALILGF 87

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L +      R       + +  + +  F    +P L+++   Y L+    V        
Sbjct: 88  GLGV-----GRLSVITPIRWVCAVIVEFF--RAVPVLIMMIFAYFLYAFYDVFP------ 134

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             +       +   L+ Y  A IAEIVR+G+ A+PRGQ EAA ALGL   +  R +LLPQ
Sbjct: 135 --SKHLALAGVITGLTLYNGAVIAEIVRAGVKALPRGQAEAASALGLRWGQTQRSILLPQ 192

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ S++P L SQ + +LK++++   + F ++V  G  + +  G  I  +++   + +S++
Sbjct: 193 AVTSMLPVLVSQLVVVLKDTAIGYQITFVEMVRQGTVVGSSYGNYIPALMVIAVLMISVN 252

Query: 379 IMIALFMNRLN 389
             ++    +L 
Sbjct: 253 FALSALATKLE 263



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 17/148 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  N+ + +I   +  +I     + +    + +                      P+ +
Sbjct: 14  ARRRNVVITLITLAITALIVWVVYSRLDAKGQLT-----------------AAKWEPFLT 56

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            + + T +L G   T   A   ++ A I+G  +G GRLS    + W+C V VE FR +P 
Sbjct: 57  PNLWTTYVLPGVQGTLTAAAVSIVLALILGFGLGVGRLSVITPIRWVCAVIVEFFRAVPV 116

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L+++ F Y         P   + L   +
Sbjct: 117 LIMMIFAYFLYAFYDVFPSKHLALAGVI 144


>gi|239834736|ref|ZP_04683064.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822799|gb|EEQ94368.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 214

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 84/215 (39%), Gaps = 14/215 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + + SF +G +L +     +R       + L  L I           + I     
Sbjct: 14  PWTIALTLGSFGIGCILGVPLLA-ARSARFALIRWLAALLIQIVRALPPILWLFIIF--- 69

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F    G      F++  I L    +A +AEI R  L ++  GQ EAA AL
Sbjct: 70  ----------FGIGMGIMPINPFVAALIGLGLIASANMAEIYRGALASLHHGQWEAATAL 119

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
               R     V+ PQA R  +P   S  + L+K +++A  +G ADL   G  +   T + 
Sbjct: 120 NFGTRYTLIDVVAPQAFRVALPSAASYLIGLMKETAVASTIGVADLAFRGNQVSQLTFKG 179

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           IE+  +    Y+ LS+ +A      ++ +  K  +
Sbjct: 180 IEVFALVGLFYIFLSLPVAWLSRSADSYLRAKVAR 214



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 36/81 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  L         I+G  + A R +   L+ W+  + +++ R +PP++ +F +
Sbjct: 9   ILSGLPWTIALTLGSFGIGCILGVPLLAARSARFALIRWLAALLIQIVRALPPILWLFII 68

Query: 149 YKSVLSVLPIPDHSIVLPFGM 169
           +  +   +   +  +    G+
Sbjct: 69  FFGIGMGIMPINPFVAALIGL 89


>gi|308234142|ref|ZP_07664879.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Atopobium vaginae DSM 15829]
 gi|328943633|ref|ZP_08241098.1| hypothetical protein HMPREF0091_10323 [Atopobium vaginae DSM 15829]
 gi|327491602|gb|EGF23376.1| hypothetical protein HMPREF0091_10323 [Atopobium vaginae DSM 15829]
          Length = 287

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 19/258 (7%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           ++ F     + + +    +   +   +            T     +  V +  + +V  +
Sbjct: 27  IITFVSLIVLAAFVASIVYRFYITGQLAPRFWNFFLLPTTWIFLLQGLVGTLSIALVAGV 86

Query: 203 FATRL------SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
            +  L       R  H +  K    + I  F       L        ++F   V+ Q+  
Sbjct: 87  LSLLLGLVLMLCRISHNRFLKIPARICIDFFRGVPSLLL--------IYFCFLVIPQYG- 137

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P F  + + ++C  AA +AE+ RSG+ AV +GQ EAA ALG T  +  + V+L
Sbjct: 138 ----IKMPSFWMIALPVACAAAAVLAEVFRSGVHAVAKGQKEAAYALGFTRAQVLQKVVL 193

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
           PQA+R +IP L +Q + ++K++++A  V + DL+     +I      + + LI   IY++
Sbjct: 194 PQAIRYVIPALIAQLVVVVKDTTVAYVVSYPDLLQNARVLITNYDALVSVYLIVALIYIA 253

Query: 377 LSIMIALFMNRLNAKIAL 394
           ++  +         K ++
Sbjct: 254 INWSLNNISKWYTKKTSV 271



 Score = 40.7 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 43/106 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L G V T  +A    + + ++G ++   R+S N+ +    R+ ++ FR +P L+
Sbjct: 65  TTWIFLLQGLVGTLSIALVAGVLSLLLGLVLMLCRISHNRFLKIPARICIDFFRGVPSLL 124

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           +I+F +  +           ++   +      +         +A  
Sbjct: 125 LIYFCFLVIPQYGIKMPSFWMIALPVACAAAAVLAEVFRSGVHAVA 170


>gi|113952871|ref|YP_730397.1| polar amino acid ABC transporter permease [Synechococcus sp.
           CC9311]
 gi|113880222|gb|ABI45180.1| polar amino amino acid ABC transporter (PAAT) family, permease
           protein [Synechococcus sp. CC9311]
          Length = 342

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 18/203 (8%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             +  LG+ L++           +T     +  +    I  +  + LIA+ +      P+
Sbjct: 147 FLALPLGVGLAI----------GRTSNLGLVAMLCRIYIDLMRAVPLIAVLFFGQLLLPL 196

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                F+         +   +A + + AA++AE VR GL ++P  Q EAA ALGL     
Sbjct: 197 -----FLPVEIEINRVLRAVMAFALFAAAYVAEDVRGGLQSIPPTQAEAAAALGLNASLT 251

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEII 367
            RL++LPQA+R  +P LT+Q + L++N+SL   +G  +L+ +  +++      G+ +E  
Sbjct: 252 MRLIILPQALRIAVPALTNQAIGLMQNTSLMAILGLIELLGISRSLLANPDYIGRHLETY 311

Query: 368 LIWMFIYLSLSIMIALFMNRLNA 390
           +    +Y  L   +AL   R+  
Sbjct: 312 VWLAGVYWLLCSAMALLAKRIER 334



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 7/184 (3%)

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
             A  +G  +  GR S   LVA +CR+Y+++ R +P + V+FF    +   LP+      
Sbjct: 147 FLALPLGVGLAIGRTSNLGLVAMLCRIYIDLMRAVPLIAVLFFGQLLLPLFLPVEIEINR 206

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKA 218
           +   +       +             +       +  LG+  SL   RL           
Sbjct: 207 VLRAVMAFALFAAAYVAEDVRGGLQSIPPTQAEAAAALGLNASL-TMRLIILPQALRIAV 265

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L   +  L+     + ++ L   L   + +L   ++IG    +  +++    L C   
Sbjct: 266 PALTNQAIGLMQNTSLMAILGLIELLGISRSLLANPDYIGRHLETYVWLAGVYWLLCSAM 325

Query: 279 AFIA 282
           A +A
Sbjct: 326 ALLA 329


>gi|218662212|ref|ZP_03518142.1| amino acid ABC transporter permease [Rhizobium etli IE4771]
          Length = 241

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 3/212 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I   +F +GI+L        +    +  + +  LY  T +I  +P L+LI   Y    
Sbjct: 31  VAISACAFAVGILLGT-GGAFGKLSGNRALRLVLDLY--TTVIRAVPELILIVGLYYAGT 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D                  F++    L     A++ E++R  ++A+P GQ+EAA A G+ 
Sbjct: 88  DGLNRLLAALELPPIEVNGFVAAVAVLGFVQGAYMTEVLRGAILAIPTGQIEAAKAFGMG 147

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R VLLP  + + +P + + ++++ K+S+L   VG+ +L          T      
Sbjct: 148 PALRFRRVLLPALLPNALPGMANLWMSVTKDSALVAVVGYQELALATRLAGASTKHYFVF 207

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            L    +YL+++++  +    +  ++   + +
Sbjct: 208 FLASALLYLAITLVSNVAFKLIEGRVRRGQPR 239


>gi|312278894|gb|ADQ63551.1| Amino acid (Glutamine) ABC transporter permease protein
           [Streptococcus thermophilus ND03]
          Length = 225

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K  + L  +Y+    I        + L + ++F        N  G        +S  
Sbjct: 49  SKSKIVRFLSRIYLEFIRIMP-----QLVLLFIVYFGLARNFNINISGE-------LSAI 96

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + +  A + ++VR  + ++PR Q E+  ALGLT+ +    V++PQ +R ++P   + 
Sbjct: 97  IVFTLWGTAEMGDLVRGSITSLPRHQFESGRALGLTNGQLYTYVIIPQVLRRLLPQAINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFM 385
              ++K +SL V +G  ++  VG  II+     I      I    + +Y ++   ++   
Sbjct: 157 VTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILILYFAICYPVSKLS 216

Query: 386 NRLNAK 391
             L  +
Sbjct: 217 TYLENR 222


>gi|218462542|ref|ZP_03502633.1| ABC transporter, membrane spanning protein [Rhizobium etli Kim 5]
          Length = 174

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 2/170 (1%)

Query: 229 IFGLPTLVLI-ALKYQLHFDKPVLGQF-NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           + G P L+ +  L Y +    P++    +      V   F    ++ +   AA+ AE++R
Sbjct: 5   LLGTPLLIQLWLLYYGVGSLLPMIPGLRSSFVWPIVREGFFFAAVSFTLNYAAYEAEVLR 64

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L+AVP+G++EA  A G+TH    R + LP+A+R  +P +  + +  LK + LA  V  
Sbjct: 65  GALLAVPKGELEAGRAFGMTHWTLLRRIWLPRAIRIALPTIAGEVVLQLKATPLAFTVTV 124

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            DL +V   I   T    E +++    Y+ L+I+I      +  ++  + 
Sbjct: 125 MDLYAVAYKIRQDTLLVYEPLIVVTIFYVCLTIVITRAFRIVERQVPARR 174


>gi|12831454|gb|AAK08609.1| GtpD [Agrobacterium tumefaciens]
          Length = 240

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 17/229 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L F +  +D      + S V+ +  + FA   +     KTG     +Y     +  +P +
Sbjct: 4   LEFKSFLLDGILNTLLLSGVMILGGTFFAVIFATGLSVKTGWVSRPIYGLVECLRDIPLM 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y           F           F S  +++S +  A  A I+R+GL++VP G
Sbjct: 64  VTVLMVY-----------FVLPHAGLSLNPFWSSALSVSVWGGANGAHIIRAGLLSVPIG 112

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA++ GL   K   LV+LPQAM  I+PP  S    L++ SSL   +G  +L+     
Sbjct: 113 QREAALSSGLRSWKGLLLVVLPQAMPIILPPYVSLVTGLVQASSLGSVLGVNELLRSAQI 172

Query: 356 IINQT------GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +I QT        A  +    + +Y +L   I+    RL    A   ++
Sbjct: 173 LIEQTTISRGGSPAYLVYGAILVVYFALCWSISALGARLERHFARPYRR 221



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 30/84 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G +NT  L+   ++  T    +   G       V+      VE  R+IP +V +  +
Sbjct: 10  LLDGILNTLLLSGVMILGGTFFAVIFATGLSVKTGWVSRPIYGLVECLRDIPLMVTVLMV 69

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +       +        + + 
Sbjct: 70  YFVLPHAGLSLNPFWSSALSVSVW 93


>gi|167750528|ref|ZP_02422655.1| hypothetical protein EUBSIR_01504 [Eubacterium siraeum DSM 15702]
 gi|167656454|gb|EDS00584.1| hypothetical protein EUBSIR_01504 [Eubacterium siraeum DSM 15702]
          Length = 228

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +  +      S  LGI + +  T+ +R           +L +    I  +P L
Sbjct: 23  LGGLWTALWISLVSVAISIPLGIGMGVLMTKKNRILK-------AVLRVYLEFIRIMPQL 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ + +   F       ++  G         +  I    +  A + ++VR  LI++P+ 
Sbjct: 76  VLLFIMF---FGTTRAFGWDLSGE-------AASIIVFVLWGTAEMGDLVRGALISIPKH 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E++ ALGLT+ +    V++PQ +R +IP   +    ++K +SL + +G  +++ V   
Sbjct: 126 QYESSEALGLTNAQTYLYVIIPQTIRRLIPLSINLITRMIKTTSLILMIGVVEVLKVAQQ 185

Query: 356 IINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II          A  + L    +Y      I++    L  K +
Sbjct: 186 IIEANRMTSPNGAFGVYLTVFLLYFIACWPISMLAKYLEKKWS 228



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +      +    +L G     W++   +  +  +G  +G      N+++  + RVY+E  
Sbjct: 10  IDVLFKGTNFIRLLGGLWTALWISLVSVAISIPLGIGMGVLMTKKNRILKAVLRVYLEFI 69

Query: 137 RNIPPLVVIFFLYKSVLSVLPI 158
           R +P LV++F ++         
Sbjct: 70  RIMPQLVLLFIMFFGTTRAFGW 91


>gi|170748628|ref|YP_001754888.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
 gi|170655150|gb|ACB24205.1| binding-protein-dependent transport systems inner membrane
           component [Methylobacterium radiotolerans JCM 2831]
          Length = 231

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 9/202 (4%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-KTGKALPLLYISTFLIFGLPTLVLIAL 240
             D        + +L  +  L +  L   F       A     I T  +  L  + ++ L
Sbjct: 18  WPDGPVGGLALTLILSGLSGLASAALGLIFGVVLAVSAGAARTILTAGLGFLRAVPVVML 77

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            +  +F  P+L   +        PE  ++  ALS    A+++  V SG+ +V RGQ EA 
Sbjct: 78  IFWTYFLLPILFGVSI-------PEAGTVAAALSLVGGAYLSYGVASGIASVGRGQWEAG 130

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           +ALGL   +  R V+LPQA+R++ P   +Q+  L+K++SLA  +G  +L  V   + N+ 
Sbjct: 131 LALGLGPWRTLRFVILPQALRAMAPSFVNQWTTLIKDTSLAYVIGVPELSFVAAQVNNRA 190

Query: 361 G-QAIEIILIWMFIYLSLSIMI 381
                EI L    +Y  L + +
Sbjct: 191 MIYPAEIFLFVGAVYGVLCVSL 212


>gi|167841846|ref|ZP_02468530.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia thailandensis MSMB43]
          Length = 225

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 93/224 (41%), Gaps = 14/224 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +            +       + +I + +FV G+++ +    +  H+   + + +  
Sbjct: 1   MTTMTLQFAPILEQWPYLLAGAWLSLQIAMLAFVFGMLIGVVCASIV-HYGPASLRRVVA 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+        P LV I   +           F           F ++ I  +    A++
Sbjct: 60  AYVMFAT--NTPQLVQIFFLF-----------FALPEVGVTLSPFSAVLIGATFNAGAYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EI R+G  +V R ++EAA  LG +  +  R V+ P  ++ + PPL++Q++ +   +S+A
Sbjct: 107 CEIQRAGFASVRRAEIEAAEVLGFSTSQIVRYVIFPHVLKVMFPPLSNQFIMMTLGTSMA 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
              G  +L      + +QT  +IE   +   +Y++++++    +
Sbjct: 167 SVFGVEELTGRTFNLSSQTYLSIEAFSVAAVMYIAITLIATFAL 210



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   +  +A    +   +IG +  +        +  +   YV    N P LV I
Sbjct: 15  WPYLLAGAWLSLQIAMLAFVFGMLIGVVCASIVHYGPASLRRVVAAYVMFATNTPQLVQI 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FFL+ ++  V         +  G   N
Sbjct: 75  FFLFFALPEVGVTLSPFSAVLIGATFN 101


>gi|163868659|ref|YP_001609868.1| glutamate/aspartate transport system permease protein [Bartonella
           tribocorum CIP 105476]
 gi|161018315|emb|CAK01873.1| glutamate/aspartate transport system permease protein [Bartonella
           tribocorum CIP 105476]
          Length = 238

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 2/202 (0%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++ S+F T  +       G  L ++ +S+  I     +V I     +     +L  F  
Sbjct: 37  GLLFSVFLTLFATVLGFVFGTLLAMMRLSSIKILSWFAIVYITAMRSIPLVMVILWFFVL 96

Query: 257 IGGSTVSPEFM--SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +   T +      S  I  + +  A+ AEI+R+G+ +VP+GQ  A  ALG+T+ ++  +V
Sbjct: 97  LPFLTGTSIGANKSALITFTAFETAYFAEIMRAGINSVPQGQKYAGQALGMTYWQSMYIV 156

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R ++P   +Q + L ++++L  A+    L++      N  G   E  ++    Y
Sbjct: 157 ILPQAFRDMLPVFLTQVIILFQDTTLVYAISGHSLLNGFDIAANNFGVKQEAYILAAIFY 216

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
             +  +++  +  L  K+++  
Sbjct: 217 FVICFILSQIVLYLQKKVSIIR 238



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 35/62 (56%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + + +L     +   + GTL+   RLS+ K+++W   VY+   R+IP ++VI +
Sbjct: 33  YILSGLLFSVFLTLFATVLGFVFGTLLAMMRLSSIKILSWFAIVYITAMRSIPLVMVILW 92

Query: 148 LY 149
            +
Sbjct: 93  FF 94


>gi|300698249|ref|YP_003748910.1| amino-acid ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
 gi|299074973|emb|CBJ54542.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
          Length = 230

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R    +  + + + ++S   I G P L+ + L Y +    P L   +           
Sbjct: 49  WARLSRYRLLRGMVMAWVSA--IRGTPALIHLLLAYYV---VPPLLGLSI-------SPL 96

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +   AL+C T+A++ EI+R  L +VP  Q  AA ALG+   +  R VLLPQ     IPP
Sbjct: 97  TAGIGALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAIPP 156

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++  LLK SSL   +   +L +V      Q+   +++  +   +Y  +   ++    
Sbjct: 157 LTSEFTILLKASSLLSIIAVPELATVARNASLQSDLPLQVFAMTAAVYFVILSCVSAATR 216

Query: 387 RLNAKIAL 394
               +++ 
Sbjct: 217 VCERRVSW 224


>gi|55821557|ref|YP_139999.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823485|ref|YP_141926.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|55737542|gb|AAV61184.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739470|gb|AAV63111.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
          Length = 231

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K  + L  +Y+    I        + L + ++F        N  G        +S  
Sbjct: 55  SKSKIVRFLSRIYLEFIRIMP-----QLVLLFIVYFGLARNFNINISGE-------LSAI 102

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + +  A + ++VR  + ++PR Q ++  ALGLT+ +    V++PQ +R ++P   + 
Sbjct: 103 IVFTLWGTAEMGDLVRGSITSLPRHQFDSGRALGLTNGQLYTYVIIPQVLRRLLPQAINL 162

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFM 385
              ++K +SL V +G  ++  VG  II+     I      I    + +Y ++   ++   
Sbjct: 163 VTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILILYFAICYPVSKLS 222

Query: 386 NRLNAK 391
             L  +
Sbjct: 223 TYLENR 228



 Score = 37.6 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 43/88 (48%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           G+++           +    IL G   T  ++   ++ + ++GTL G    S +K+V ++
Sbjct: 4   GYDMQDSGFQVLLQGNNFLRILQGLGVTIGISIVSVLLSLLLGTLFGIVMTSKSKIVRFL 63

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVL 156
            R+Y+E  R +P LV++F +Y  +    
Sbjct: 64  SRIYLEFIRIMPQLVLLFIVYFGLARNF 91


>gi|145631224|ref|ZP_01786997.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           R3021]
 gi|144983151|gb|EDJ90646.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           R3021]
          Length = 227

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 6/202 (2%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   L+LF T L    ++   +A+ L      L  G P LV   L Y            +
Sbjct: 26  IAFCLALFLTFLLSMENKWVKRAVNL---YLTLFTGTPLLVQFFLIYAGP--GQFQWIID 80

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 +S  +    +AL+  +AA+  ++    + A+P+GQ E+  ALGL   +    +L
Sbjct: 81  SPLWYVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTL-KIL 139

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +P A++  +P   ++ + + K ++LA  +   D++     +      AI I  I   IYL
Sbjct: 140 IPYALKRALPSYGNEIILVFKGTALASTITIMDIMGYARQLYGTEYDAITIYGIAGGIYL 199

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            ++ +  L + +L  K+   E+
Sbjct: 200 IITGIATLLLRKLETKVLAFER 221


>gi|84517034|ref|ZP_01004391.1| polar amino acid uptake family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84509152|gb|EAQ05612.1| polar amino acid uptake family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 263

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 101/254 (39%), Gaps = 13/254 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             +  + L ++     ++   +    ++  +     T+       +  F L + L L   
Sbjct: 16  IIMVAAALGLVVWAALAMRWDWIARYHDLAVQGIWRTLWLLGLSCLIGFALAVPLGLAQA 75

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP- 264
              R F     +A         +I G P L+ + L Y       +  QF +I  S + P 
Sbjct: 76  AGPR-FLAAPARAFCT------VIRGTPLLLQLWLIYFG--VGSLFPQFPWIRESELWPY 126

Query: 265 ---EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +    +ALS   A +  E++R    +V  GQ+EAA ++G+      R +  PQA++
Sbjct: 127 LRQAWPYALLALSLSFAGYEGEVMRGAFKSVAGGQLEAARSMGMGRFAIFRRIWFPQALQ 186

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L  + +  LK + L   +   ++ +V   +   T    E +L+   IY+ ++ ++
Sbjct: 187 RALPTLGGETVLQLKATPLVATITVIEIYAVSSRVRQDTFIIYEPLLLLAVIYMVIAGLL 246

Query: 382 ALFMNRLNAKIALK 395
           AL    L  +    
Sbjct: 247 ALAFKLLEQRFNRG 260



 Score = 40.3 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 32/94 (34%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y    + G   T WL     +    +   +G  + +  + +A   R +  V R  P L+
Sbjct: 40  RYHDLAVQGIWRTLWLLGLSCLIGFALAVPLGLAQAAGPRFLAAPARAFCTVIRGTPLLL 99

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            ++ +Y  V S+ P            +L      
Sbjct: 100 QLWLIYFGVGSLFPQFPWIRESELWPYLRQAWPY 133


>gi|312863620|ref|ZP_07723858.1| amino acid ABC transporter, permease protein [Streptococcus
           vestibularis F0396]
 gi|311101156|gb|EFQ59361.1| amino acid ABC transporter, permease protein [Streptococcus
           vestibularis F0396]
          Length = 225

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K  + L  +Y+    I        + L + ++F        N  G        +S  
Sbjct: 49  SKSKIVRLLSRIYLEFIRIMP-----QLVLLFIVYFGLARNFNINISGE-------LSAI 96

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + +  A + ++VR  + ++PR Q E+  +LGLT+ +    V++PQ +R ++P   + 
Sbjct: 97  IVFTLWGTAEMGDLVRGSITSLPRHQFESGRSLGLTNGQLYTYVIIPQVLRRLLPQAINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFM 385
              ++K +SL V +G  ++  VG  II+     I      I    + +Y ++   ++   
Sbjct: 157 VTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILILYFAICYPVSKLS 216

Query: 386 NRLNAK 391
             L  +
Sbjct: 217 TYLENR 222


>gi|291454548|ref|ZP_06593938.1| glutamate transporter permease [Streptomyces albus J1074]
 gi|291357497|gb|EFE84399.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 307

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 108/255 (42%), Gaps = 18/255 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V + +                           L     T+   A   + +  LG V  + 
Sbjct: 42  VWWLVSALGDKGHLEWAKWKPFTESSSWTVYLLPGLGNTLKAAALSMIIALPLGAVFGIA 101

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             RLS H   +      + +        +P L+L+    +L+                  
Sbjct: 102 --RLSDHAWVRIPAGTVVEF-----FRAIPVLILMVFANELYSGS----------VEPDV 144

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
               ++   L  Y A+ +AEIVR+G++++P GQ EA  A+GL   +  R +LLPQA+ ++
Sbjct: 145 RPLYAVVTGLVLYNASVLAEIVRAGILSLPSGQAEAGRAIGLRKSQTMRFILLPQAVTAM 204

Query: 324 IPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +P + SQ + ++K+++L    +GF +L+   GT+    G  I   ++   I++ L++++ 
Sbjct: 205 LPAIVSQLVVIVKDTALGGAMIGFTELLRSRGTMSAFYGNTIPSFIVVAVIFVVLNLILT 264

Query: 383 LFMNRLNAKIALKEK 397
            F + L   +  ++K
Sbjct: 265 TFASWLEKWLRSRKK 279



 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 22/142 (15%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N+ V ++ A+ L     W V+                 L ++   
Sbjct: 12  SSVLYDTPGPRAKARNLIVSVVFAVALAAGVWWLVSA----------------LGDKGHL 55

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E  +   P+T  SS+   +L G  NT   A   MI A  +G + G  RLS +  V     
Sbjct: 56  EWAK-WKPFTESSSWTVYLLPGLGNTLKAAALSMIIALPLGAVFGIARLSDHAWVRIPAG 114

Query: 131 VYVEVFRNIPPLVVIFFLYKSV 152
             VE FR IP L+++ F  +  
Sbjct: 115 TVVEFFRAIPVLILMVFANELY 136


>gi|170700297|ref|ZP_02891310.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170134784|gb|EDT03099.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 244

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 53/248 (21%), Positives = 104/248 (41%), Gaps = 9/248 (3%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
               + +  L                   +    +T++ +      S   GIVL+     
Sbjct: 1   MTVAAAVDALRKFGLDYSFVLAPDERASFVHGMGVTLELSIATAFGSLACGIVLAALLVS 60

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            S                   +    PTLV +   + L  +  +      +GG+ ++P F
Sbjct: 61  PSAALARPA-------RAFVEVTRNTPTLVQLFCAF-LVVNMLISAALRDLGGNPLTP-F 111

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +   I +S +  AF AE +R+GL AVPR  +EAA +LG + R+    V LP A+R  +P 
Sbjct: 112 IWSVIVISLHKGAFHAEALRAGLEAVPRATLEAAQSLGYSRRQRLWHVQLPLAVRFALPA 171

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L +  ++L+K +++A A+   D+      I  Q    +E++++ +  + +L+  + +   
Sbjct: 172 LVNNLVDLVKMTTVASAIAVGDVTYASIMIWTQRDNVLELMILILLFFGALTFTVNVAGR 231

Query: 387 RLNAKIAL 394
            L  ++ +
Sbjct: 232 WLEHRLRI 239



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  L+ +    +   G ++ A  +S +  +A   R +VEV RN P LV +F  
Sbjct: 29  FVHGMGVTLELSIATAFGSLACGIVLAALLVSPSAALARPARAFVEVTRNTPTLVQLFCA 88

Query: 149 YKSV 152
           +  V
Sbjct: 89  FLVV 92


>gi|327194765|gb|EGE61607.1| nopaline ABC transporter, permease protein [Rhizobium etli
           CNPAF512]
          Length = 174

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 4/170 (2%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T +I G+P L++I L Y               GG      F +   AL+   + + AEI
Sbjct: 4   YTGIIRGVPELLIILLTYFGGTAL----LSAITGGYIEINAFAAGVAALTVVFSGYAAEI 59

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  + AV  GQ EAA ALGL++ +   L+++PQ +   +P   +  ++L+K++SL   V
Sbjct: 60  FRGAINAVAPGQREAAAALGLSNAQIWFLIIIPQMIPIALPAFCNLCISLIKDTSLISVV 119

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  D++ V           +   L    IYL+L+ +  L    L  + +L
Sbjct: 120 GLTDVMRVAYIGAGSLRAPLPFYLAASAIYLALTSLSLLSFRLLERRYSL 169


>gi|312114910|ref|YP_004012506.1| polar amino acid ABC transporter inner membrane protein
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220039|gb|ADP71407.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 229

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 5/210 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   S +LG++++     L R +  +       L+  T+++ G P L  + L Y  
Sbjct: 20  VTLELAFGSVLLGLLIA-APVALGRAYGGRALSG--ALFGYTYMMRGTPLLAQLFLVYYG 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                       +      P F    +  +  TAA+ AEI+   + AVPRGQ+EAA A  
Sbjct: 77  SAQFQTSLDAAGLWWLFRDP-FYCSLLTFTLNTAAYQAEILAGAVRAVPRGQVEAAKAAA 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++     R ++LPQA R  + PL ++ + ++K S+LA  V   DL++       +T    
Sbjct: 136 MSPALVARRIVLPQAARLALRPLGNELILMVKASALASVVTVYDLLATAKLAFQRTYD-F 194

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +  +    +Y+    +I    N L+ ++  
Sbjct: 195 QAYIAAALVYVLTVEIIRRVWNMLDRRLNR 224


>gi|15889638|ref|NP_355319.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
 gi|15157536|gb|AAK88104.1| ABC transporter, membrane spanning protein [Agrobacterium
           tumefaciens str. C58]
          Length = 240

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 3/210 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I   ++++GIV+ L A  L +    +    L  LY +         ++++ L Y    
Sbjct: 30  LAISAGAYLIGIVIGL-AGALGKLSGNRPLGLLLNLYTTAIRAV-PELILIVGLYYAGTD 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L Q   +    V+  F++    L     A++ E++R  ++AVP GQ+EAA A G++
Sbjct: 88  GLNRLLQLMGLPPLEVN-GFVAAVAVLGFVQGAYMTEVLRGAILAVPNGQIEAARAFGMS 146

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP  + + +P L + +L + K+S+L   VG+ +L          T Q    
Sbjct: 147 PFLRFRRVVLPALLPNALPGLANLWLAVTKDSALVAVVGYQELALATRLAGASTKQYFLF 206

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            L   F+YL+++++  L  ++L  ++   +
Sbjct: 207 FLAAAFLYLAITLVSNLVFSQLERRVRRGQ 236



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q + PY     +   +L G  +T  ++    +   +IG     G+LS N+ +  +  +Y 
Sbjct: 9   QLLSPYPPG--WGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYT 66

Query: 134 EVFRNIPPLVVIFFLYKSVL 153
              R +P L++I  LY +  
Sbjct: 67  TAIRAVPELILIVGLYYAGT 86


>gi|119383777|ref|YP_914833.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119373544|gb|ABL69137.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 221

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 86/226 (38%), Gaps = 14/226 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F   +    L         +  I + +  +GIVL++    L+       G    L 
Sbjct: 1   MSYNFQFGIVLDALPDLMRGAALSLSIAIVTMAVGIVLAMP---LAVGSWNGKGLVACLS 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L  I   +                       ++++ IAL    A ++A
Sbjct: 58  RSWIELARNTPCLAQIYFFFY-----------GLGAFGIFLSPWLAVGIALCFNNAGYLA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI R GL  V   QM+ A +LGL    A R ++ PQ  R+    + +Q++  L N+SL  
Sbjct: 107 EIFRGGLNGVNANQMKGARSLGLGPVGAYRYIVFPQVFRNTFSSIGNQFIWALLNTSLGA 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            +G  DL  V     ++T +  E  L    IY  L+ ++    NR 
Sbjct: 167 LIGLYDLSGVAMDYQSRTFKTFEFFLAIAVIYFILAKLVLFLANRF 212


>gi|317053312|ref|YP_004119079.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316953051|gb|ADU72523.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 247

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 2/178 (1%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 +  P+L    F  F    L+    +  ++ D P       +G  T  PEF+   
Sbjct: 61  LWVSLFRNTPILVQFLFWYFSAWNLLPRVWRDWINADHPGALLPGDVGWLT--PEFLCSA 118

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
             L  + +AF+ E + +GL AVP GQ EAA++ G T   A R +LLPQ + +   P+  Q
Sbjct: 119 WGLGIFISAFLVEELSAGLYAVPDGQREAALSQGFTTAAALRWILLPQGLANAWQPVAGQ 178

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           YLNL+K SSLA  +GFA+L      + +    A+E   +   +YL+  +++ L  + L
Sbjct: 179 YLNLMKLSSLASGIGFAELTYQVRQVDSYNAHALEAFAVGTVLYLATGLLLGLIFSWL 236



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 56/152 (36%), Gaps = 3/152 (1%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ G++ T W++  G + AT++  L+   RLS N+L      ++V +FRN P LV  
Sbjct: 16  LQWIVNGYLTTLWVSLVGALLATLLAILLLFLRLSGNRLAVRGVALWVSLFRNTPILVQF 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
            F Y S  ++LP      +           L      +        +   + I   L   
Sbjct: 76  LFWYFSAWNLLPRVWRDWINAD---HPGALLPGDVGWLTPEFLCSAWGLGIFISAFLVEE 132

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
             +  +    G+    L         L  ++L
Sbjct: 133 LSAGLYAVPDGQREAALSQGFTTAAALRWILL 164


>gi|227529141|ref|ZP_03959190.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350985|gb|EEJ41276.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 227

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 102/223 (45%), Gaps = 9/223 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           + + +           ++ +FSF+   +L L  T        +  + +  +Y++  L+ G
Sbjct: 8   SQKIIGIIWRGFPNTIELLIFSFIFATLLGLLLT-WVGLRKNRLAQGIATVYLN--LVRG 64

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P L+++ L Y   +  PVL +   I         M   + LS   + ++AE  RS  ++
Sbjct: 65  TPPLLMLLLAY---YGLPVLLKAIGI-NIDHWTRLMFGILGLSLGWSGYLAEAFRSAYLS 120

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ+EAA ++G+  +   R ++LPQA    +P + +  + L+K +SL   +G  D+ +
Sbjct: 121 VDTGQIEAARSVGMKDQTTFRQIILPQAAILALPNIENLVVGLVKATSLVYVIGLYDMYN 180

Query: 352 VGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               + NQT     ++I ++    Y  L ++I +    +  + 
Sbjct: 181 QASNLSNQTAGLHQLQIFILLALSYWGLVLVIEVLFRLIRRRY 223



 Score = 38.8 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF NT  L     I AT++G L+    L  N+L   I  VY+ + R  PPL+++   
Sbjct: 15  IWRGFPNTIELLIFSFIFATLLGLLLTWVGLRKNRLAQGIATVYLNLVRGTPPLLMLLLA 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  +  +L     +I     +     GLS         A
Sbjct: 75  YYGLPVLLKAIGINIDHWTRLMFGILGLSLGWSGYLAEA 113


>gi|134291671|ref|YP_001115440.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia vietnamiensis G4]
 gi|134134860|gb|ABO59185.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia vietnamiensis G4]
          Length = 228

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 11/187 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   +   + VLG+ + +              +  PL+      I   P +V +   +  
Sbjct: 23  TTLALTAVATVLGVAIGILGAAAYSVDARAAVRLRPLIGAYVEAIRNTPFVVQLFFIF-- 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L             E+ +  +A++    A+  EIVR+G+ AVP G +EAA AL 
Sbjct: 81  -FGLPAL--------GVHIGEYAAAILAMTLNLGAYSVEIVRAGVAAVPNGHVEAASALA 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R V+LPQA+  + P L+SQ +  +  S++   +  ADL    G I ++  +A 
Sbjct: 132 MSRAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYAAGYIQSRNFRAF 191

Query: 365 EIILIWM 371
           E   +  
Sbjct: 192 ETYFVTT 198



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 3/99 (3%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL---VAWICRVYV 133
           + +   + YA     G   T  L     +    IG L  A      +    +  +   YV
Sbjct: 5   LQFGELADYAGVFASGAATTLALTAVATVLGVAIGILGAAAYSVDARAAVRLRPLIGAYV 64

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           E  RN P +V +FF++  + ++             M LN
Sbjct: 65  EAIRNTPFVVQLFFIFFGLPALGVHIGEYAAAILAMTLN 103


>gi|298290396|ref|YP_003692335.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926907|gb|ADH87716.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 270

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 14/225 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G            L +       V + V+G +L+      +R         LP  +I  F
Sbjct: 51  GSGSGWPLTGGFVLNIFLGLCSMVLAAVMGTLLAFGMMARNRAIR------LPCFFIMNF 104

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L      ++L A+ Y + F+          G S   P F+   I L+  T A  AEI+R 
Sbjct: 105 LRNSPWLVLLFAMLYIIPFNV------RLFGFSIAVPAFVKAVIGLALPTGANFAEIIRG 158

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++  GQ EAA A G         ++LPQA+R +IP   + Y  L+  +SLA   G  
Sbjct: 159 AVQSIHSGQWEAARAFGYMPMAIYWRIILPQALRRMIPGWMNLYALLMIATSLATVTGIQ 218

Query: 348 DLVSVGGTIINQTGQAIEIILIWM--FIYLSLSIMIALFMNRLNA 390
           D+++   T+++   + + +       F++ +    IAL   R+  
Sbjct: 219 DVITTLNTLLSMENERVIVYFYIATLFLFFAYCYPIALLARRMEQ 263


>gi|260461008|ref|ZP_05809257.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259033042|gb|EEW34304.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 221

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 18/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   +F   +GI+ ++      R F  +        Y+           
Sbjct: 18  LRGLEKTIQLAALSILFGTAIGILGAV-----GRSFGPRFLSWTIAAYVELIRNTP---- 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
               L  QL+F    L  F F   S      M+  +ALS +  A+  EI+R+G+ A+P G
Sbjct: 69  ----LLIQLYFVFFSLPLFGFKLSSN-----MAAVVALSIHLGAYATEILRAGIEAIPEG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA +LGL   +  R V+L  A R++ P L++Q++  +  +S+  A+   +L +V   
Sbjct: 120 QIEAAKSLGLGRYRIIRHVVLVPAARAVYPSLSAQFILQIMGTSIVGAIAAEELTAVANN 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++ QT ++ E+ ++   IY  L    +L    +   +
Sbjct: 180 LVMQTFRSFEVYIVIAIIYFVLVQTASLLFAGIGKLM 216



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 38/83 (45%)

Query: 73  DQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVY 132
            Q  + +     +   +L G   T  LA   ++  T IG L   GR    + ++W    Y
Sbjct: 1   MQTALQFGPILVHLDLLLRGLEKTIQLAALSILFGTAIGILGAVGRSFGPRFLSWTIAAY 60

Query: 133 VEVFRNIPPLVVIFFLYKSVLSV 155
           VE+ RN P L+ ++F++ S+   
Sbjct: 61  VELIRNTPLLIQLYFVFFSLPLF 83


>gi|224418905|ref|ZP_03656911.1| hypothetical protein HcanM9_06475 [Helicobacter canadensis MIT
           98-5491]
 gi|253827858|ref|ZP_04870743.1| ABC-type amino acid transport system, permease component
           [Helicobacter canadensis MIT 98-5491]
 gi|313142419|ref|ZP_07804612.1| polar amino acid ABC transporter [Helicobacter canadensis MIT
           98-5491]
 gi|253511264|gb|EES89923.1| ABC-type amino acid transport system, permease component
           [Helicobacter canadensis MIT 98-5491]
 gi|313131450|gb|EFR49067.1| polar amino acid ABC transporter [Helicobacter canadensis MIT
           98-5491]
          Length = 217

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 24/222 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T         FS + G VL    T  +R           L ++  F +  +  +
Sbjct: 14  LQGVFVTFQIAFIAIFFSCIFGFVLGYLMTLPNRF----------LSFLCRFYLESIRII 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            ++A  + ++F        N IG         +  +  S +  A + ++VR  + ++PR 
Sbjct: 64  PILAWLFIVYFGFSSFLNLNGIG---------ACILVFSLWGIAEMGDLVRGAISSLPRH 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+  +    ++LPQ+ R ++PPL + +  ++K +SLA  +G +D++ VG  
Sbjct: 115 QSESGRALGLSEIQIQVFIILPQSFRRLLPPLVNLFTRMIKTTSLAALIGVSDMLKVGQQ 174

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           II          +  +      +Y  L   ++LF   L  K+
Sbjct: 175 IIEVNLIHYPQASFWVYGGIFALYFLLCYPLSLFAKHLEKKL 216



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   TF +AF  +  + I G ++G      N+ ++++CR Y+E  R IP L  +F +
Sbjct: 13  LLQGVFVTFQIAFIAIFFSCIFGFVLGYLMTLPNRFLSFLCRFYLESIRIIPILAWLFIV 72

Query: 149 YKSVLSV 155
           Y    S 
Sbjct: 73  YFGFSSF 79


>gi|167738656|ref|ZP_02411430.1| binding-protein-dependent transport system inner membrane component
           [Burkholderia pseudomallei 14]
          Length = 158

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 50/147 (34%), Positives = 81/147 (55%)

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
             + P       +     S EF++ ++ LS YT+AF+AE  ++GL  VP GQ  AA ALG
Sbjct: 4   WLNAPHALDVGGLALRWPSFEFVAGWLGLSGYTSAFVAEEFQAGLRGVPAGQHHAASALG 63

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +A R V+LPQA+R  +PPL  QY+NL+KNSSL +A+G A+L      +  +T +  
Sbjct: 64  LSPLQAFRFVVLPQAVRIALPPLFGQYMNLIKNSSLTMAIGVAELSYASRQVETETFRTF 123

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
               +   +Y++   ++      +  +
Sbjct: 124 AAFGVSTVLYVAAVALVEAAAQWMLRR 150


>gi|108799120|ref|YP_639317.1| amino acid ABC transporter permease [Mycobacterium sp. MCS]
 gi|119868235|ref|YP_938187.1| polar amino acid ABC transporter, inner membrane subunit
           [Mycobacterium sp. KMS]
 gi|108769539|gb|ABG08261.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. MCS]
 gi|119694324|gb|ABL91397.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Mycobacterium sp. KMS]
          Length = 292

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  L+V     +                         L     T+   A   V + +LG 
Sbjct: 28  ITALIVWVVYSRLDAKGQLTAAKWEPFLTPNLWTTYVLPGVQGTLTAAAVSIVLALILGF 87

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
            L +      R       + +  + +  F    +P L+++   Y L+    V        
Sbjct: 88  GLGV-----GRLSVITPIRWVCAVIVEFF--RAVPVLIMMIFAYFLYAFYDVFP------ 134

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
             +       +   L+ Y  A IAEIVR+G+ A+PRGQ EAA ALGL   +  R +LLPQ
Sbjct: 135 --SKHLALAGVITGLTLYNGAVIAEIVRAGVKALPRGQAEAASALGLRWGQTQRSILLPQ 192

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ S++P L SQ + +LK++++   + F ++V  G  + +  G  I  +++   + +S++
Sbjct: 193 AVTSMLPVLVSQLVVVLKDTAIGYQITFVEMVRQGTVVGSSYGNYIPALIVIAVLMISVN 252

Query: 379 IMIALFMNRLN 389
             ++    +L 
Sbjct: 253 FALSALATKLE 263



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 17/148 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  NI + +I   +  +I     + +    + +                      P+ +
Sbjct: 14  ARRRNIVITLITLAITALIVWVVYSRLDAKGQLT-----------------AAKWEPFLT 56

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            + + T +L G   T   A   ++ A I+G  +G GRLS    + W+C V VE FR +P 
Sbjct: 57  PNLWTTYVLPGVQGTLTAAAVSIVLALILGFGLGVGRLSVITPIRWVCAVIVEFFRAVPV 116

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           L+++ F Y         P   + L   +
Sbjct: 117 LIMMIFAYFLYAFYDVFPSKHLALAGVI 144


>gi|171462944|ref|YP_001797057.1| polar amino acid ABC transporter, inner membrane subunit
           [Polynucleobacter necessarius subsp. necessarius STIR1]
 gi|171192482|gb|ACB43443.1| polar amino acid ABC transporter, inner membrane subunit
           [Polynucleobacter necessarius subsp. necessarius STIR1]
          Length = 158

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 86/165 (52%), Gaps = 7/165 (4%)

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + ++ L+ +        P+L     IG S  +  F    I    + AAF +EIVR+G+ +
Sbjct: 1   MRSIPLVMVILWFFLLIPML-----IGRSIGADLF--ATITFIAFEAAFFSEIVRAGIQS 53

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP+GQ+ A  ALG+T+ +  RLV LPQA R++IP   +Q + L +N+SL  A+G  DL+ 
Sbjct: 54  VPKGQIYAGEALGMTYGQNMRLVFLPQAFRNVIPVFMTQTIILFQNTSLVYAIGAYDLLK 113

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                    G+ IE  ++    Y  +   ++  +  + AK+A+  
Sbjct: 114 GFEIAGKNYGRPIETYILAAATYFIICFSLSKAVRAIQAKVAIIR 158


>gi|325694842|gb|EGD36747.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK150]
          Length = 219

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S + G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTIFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 PGQTEAGLSQGFTQFQILRFIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSRKLSQRWA 215



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P 
Sbjct: 9   TATNLLFILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPN 68

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 69  LLWIFTIFLVF 79


>gi|87122496|ref|ZP_01078376.1| putative amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
 gi|86162289|gb|EAQ63574.1| putative amino acid ABC transporter, permease protein [Marinomonas
           sp. MED121]
          Length = 220

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 14/196 (7%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI L      + R +  K  +++  +Y+   +I   P +V +   +   F  P L     
Sbjct: 32  GIALGTSCAAI-RQYGNKASQSVVAVYVE--IIRNTPFIVQLFFIF---FGLPSL----- 80

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                    + +  IAL+    A+  EI+R+GL ++ +GQMEAA  LGL+  +    V+ 
Sbjct: 81  ---GMKLSPWEASMIALTINLGAYSTEIIRAGLGSISKGQMEAAKVLGLSFCQTLTRVIF 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
             A   I P LTSQ + ++  S++   +   DL      + ++  +A E   +   +YL 
Sbjct: 138 TPAFEKIYPALTSQCIIVMLGSAVISQISVEDLTYAANLVQSRNFRAFESYFVTALLYLG 197

Query: 377 LSIMIALFMNRLNAKI 392
           LSI++    N +  ++
Sbjct: 198 LSILLRFAFNTVGKRL 213


>gi|270261834|ref|ZP_06190106.1| transporter [Serratia odorifera 4Rx13]
 gi|270043710|gb|EFA16802.1| transporter [Serratia odorifera 4Rx13]
          Length = 240

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 86/215 (40%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S V G++L++    + + +  +    L       F    L   L+LI     
Sbjct: 26  LTAKLFLLSVVPGMLLAVL-MAVGQVYGPRPLSWLIRCVTYFFRSTPLYLQLMLIYYGLS 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   +   PR +  A  A 
Sbjct: 85  QFDVVQLGWQNDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMGTFPRQEWVAGEAF 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V       T   
Sbjct: 145 GMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARAFYAATYSP 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L+   +YL  + ++    +R   +     ++
Sbjct: 205 FIPFLMAAALYLLCTFLLIFLFSRAERRWLAFIRR 239



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 2/148 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    ++P  ++  L+  G++   + ++W+ R     FR+ P  + +  +Y
Sbjct: 21  VTGLALTAKLFLLSVVPGMLLAVLMAVGQVYGPRPLSWLIRCVTYFFRSTPLYLQLMLIY 80

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +     +            L        TL +  N   +V   + G++ +        
Sbjct: 81  YGLSQFDVVQLGWQNDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMGTFPRQEWVA 140

Query: 210 --HFHEKTGKALPLLYISTFLIFGLPTL 235
              F     + +  L +   L  G+P L
Sbjct: 141 GEAFGMSQWQIIRRLVLPATLRRGIPAL 168


>gi|209546624|ref|YP_002278542.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537868|gb|ACI57802.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 251

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 9/217 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIF 230
           +   L       +        + +L  +    A  +S  F        PLL +  T L++
Sbjct: 11  DYWLLLLIGQYPNGPLGGLANTLILSALSIALAFPVSILFAMARLSKSPLLRWPVTALVY 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               + L+ L    +F  P+L   +        P F+++   L  Y +AF++E+VR+G++
Sbjct: 71  FTRGVPLLMLILWSYFLVPLLTGADV-------PSFVTMLTTLVVYQSAFLSEVVRAGIV 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+  GQM+AA ALG  H  A R ++LPQA+ ++IP + S +++ +K+++L   +   DL 
Sbjct: 124 ALGPGQMDAARALGHGHIGAMRYIILPQALYNMIPSILSTFVSTIKDTTLGYVINVPDLT 183

Query: 351 SVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMN 386
                + NQ   Q  ++ LI   +Y ++   +  F N
Sbjct: 184 FAASQVNNQLLTQPFQVFLILAIVYFAICWTLTYFAN 220



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G  NT  L+   +  A  +  L    RLS + L+ W     V   R +P L++I + Y
Sbjct: 26  LGGLANTLILSALSIALAFPVSILFAMARLSKSPLLRWPVTALVYFTRGVPLLMLILWSY 85

Query: 150 KSVL 153
             V 
Sbjct: 86  FLVP 89


>gi|322372849|ref|ZP_08047385.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
 gi|321277891|gb|EFX54960.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus sp. C150]
          Length = 216

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 94/215 (43%), Gaps = 27/215 (12%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+  +  I V S   G +L++      R+      + +  +YI    +  +P L+ I 
Sbjct: 18  WTTLYLSFFIIVLSTFFGTILAVM-----RNGKNPILRWIASIYIEF--VRNVPNLLWIF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + + +   K                   +   + + +T+A +AEI+R GL ++  GQ EA
Sbjct: 71  IIFLVFQLKST----------------AAGITSFTVFTSAALAEIIRGGLNSIDHGQTEA 114

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIIN 358
            ++ G T+++    ++ PQA+R ++P + SQ++ ++K++S L   +   +L      ++ 
Sbjct: 115 GLSQGFTNKQIFVYIIFPQAIRKMLPSIISQFVTVIKDTSFLYSVIALQELFGKSQILMG 174

Query: 359 QTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390
              +      +  I    Y  ++  I+ +   L+ 
Sbjct: 175 GYYEPSQIFTLYGIVALAYFVVNFAISSYSRYLSK 209



 Score = 55.3 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 37/71 (52%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    +  G   T +L+F  ++ +T  GT++   R   N ++ WI  +Y+E  RN+P 
Sbjct: 6   SATNLKFLAQGLWTTLYLSFFIIVLSTFFGTILAVMRNGKNPILRWIASIYIEFVRNVPN 65

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 66  LLWIFIIFLVF 76


>gi|170691880|ref|ZP_02883044.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170143164|gb|EDT11328.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 225

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 2/223 (0%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++ + L      + +  ++ +   V+ I++ L    +   F     +AL L   +   +F
Sbjct: 4   MDWQALIDSRGVLLSGMQVTLQITVVAILVGLAWGTVLAIFSLSANRALRLFTQTYVSLF 63

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LV++ L + L    P L +      STV    +S   A S   AAF  EI+R+G+ 
Sbjct: 64  RSIPLVMLLLWFYL--IVPQLLKALLNLPSTVDLRLVSALTAYSLLEAAFFCEIIRAGIA 121

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            +P GQ++A  ALG+T  +  R V+LPQA R+++P   +Q + + +++SL   +   D  
Sbjct: 122 GLPSGQLQAGYALGMTSMQTLRYVILPQAFRAMVPLALTQCIVIFQDTSLVYVIALGDFF 181

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                I  + G  + ++++    Y +++ ++    + +  ++A
Sbjct: 182 RRLTAIGERDGTIVPVLIVAGVAYWAITTLMIAITHCVRTRLA 224



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 34/68 (50%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  +    ++     GT++    LSAN+ +    + YV +FR+IP ++++ +
Sbjct: 15  VLLSGMQVTLQITVVAILVGLAWGTVLAIFSLSANRALRLFTQTYVSLFRSIPLVMLLLW 74

Query: 148 LYKSVLSV 155
            Y  V  +
Sbjct: 75  FYLIVPQL 82


>gi|260575754|ref|ZP_05843751.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259022152|gb|EEW25451.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 277

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 85/223 (38%), Gaps = 16/223 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +        F F L   L+L  T  S    +             F+  G P  +   L
Sbjct: 44  WNVYFGFVALAFGFFLANALALAKTARSPLLRKPA-------DWFVFVFRGSPLFIQFFL 96

Query: 241 KYQLHFDKP---VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
            Y+     P   +      +  S ++  +    I +   TAA+ AEI    L ++P+G +
Sbjct: 97  AYETLVLLPRSGINVLGMTVDTSWLTKAWAGALIVMVLNTAAYSAEIFYGALRSIPKGDL 156

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVS 351
           EAA A GLT  +  R +  P  +R   P  T++ + LL++S+L    GF       D + 
Sbjct: 157 EAADAYGLTGWQRFRRIEWPTMLRLGWPGYTNEAIFLLQSSTLVYFSGFPAFQQQGDALY 216

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 ++T        I  F ++ L++ +     R+N  +  
Sbjct: 217 YANYFADKTFNPFIPYPIVAFYFICLTLAVIWLFGRVNRHLNR 259



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +   +  F  +     +   +   + + + L+      +V VFR  P  +  F  Y++
Sbjct: 41  GLIWNVYFGFVALAFGFFLANALALAKTARSPLLRKPADWFVFVFRGSPLFIQFFLAYET 100

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--------- 202
           ++ +     + + +        +  +   + M  N   +      G + S+         
Sbjct: 101 LVLLPRSGINVLGMTVDTSWLTKAWAGALIVMVLNTAAYSAEIFYGALRSIPKGDLEAAD 160

Query: 203 --FATRLSRHFHEKTGKALPLLYI----STFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
               T   R    +    L L +         +    TLV  +           L   N+
Sbjct: 161 AYGLTGWQRFRRIEWPTMLRLGWPGYTNEAIFLLQSSTLVYFSGFPAFQQQGDALYYANY 220

Query: 257 IGGSTVSPEFMSLYIALSCYTA 278
               T +P      +A      
Sbjct: 221 FADKTFNPFIPYPIVAFYFICL 242


>gi|117617583|ref|YP_855306.1| glutamine/glutamate ABC transporter, permease protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117558990|gb|ABK35938.1| glutamine/glutamate ABC transporter, permease protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 221

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 98/213 (46%), Gaps = 9/213 (4%)

Query: 189 IFVFSFVLGIVLSLFATRLSRH----FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            F +SFVL  + +   +             T  A+ LL ++   +       +I    +L
Sbjct: 2   SFDWSFVLTTLPAFGQSVWVTLQLGAIVILTSLAVALLNVTLQSLHRPWLNGVIRAYVEL 61

Query: 245 HFDKPVLGQFNFIGGSTVS-----PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
             + P+L Q  F+     +       F +  IA++     ++ E +R+G+ AVP  Q+EA
Sbjct: 62  ARNTPLLIQLFFLYFGLPALGLSLSGFATAVIAMTFLGGGYLTEALRAGIQAVPPSQLEA 121

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
             A+GL+  +  R V LPQA  + +P L + ++ LLK +++A AV   +L+      I  
Sbjct: 122 GRAIGLSRWQLLRHVQLPQAWLASLPALFANFIFLLKETTVASAVAVPELLYTTKNYIAL 181

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  E++ +   + + + + ++L +  +  ++
Sbjct: 182 YYKTYEMLAVLTLMCVLIFLPLSLALRVVERRL 214


>gi|327470643|gb|EGF16099.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK330]
          Length = 219

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    V S + G +L++      R+   K  K +  +YI    +  +P
Sbjct: 15  FILKGLWLTLQISFISIVLSTIFGTILAVM-----RNGKNKLLKLIASIYIEF--VRNVP 67

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   + +   K                   +  I+ + +T+A +AEI+R GL A+ 
Sbjct: 68  NLLWIFTIFLVFQIKSTP----------------AGIISFTVFTSAALAEIIRGGLNAID 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ G T  +  R ++LPQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 112 PGQTEAGLSQGFTQFQILRFIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGS 171

Query: 353 GGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              ++ +     Q   + L+   IY  ++  I+ F  +L+ + A
Sbjct: 172 AQILMGRYFEAEQVFALYLLVAAIYFLINFAISSFSRKLSQRWA 215



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    IL G   T  ++F  ++ +TI GT++   R   NKL+  I  +Y+E  RN+P 
Sbjct: 9   TATNLLFILKGLWLTLQISFISIVLSTIFGTILAVMRNGKNKLLKLIASIYIEFVRNVPN 68

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 69  LLWIFTIFLVF 79


>gi|325689402|gb|EGD31407.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 229

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 81/217 (37%), Gaps = 13/217 (5%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                       F  +LG +   F   L R +     K L   YI       L       
Sbjct: 16  YQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKIPVLKPLATAYIEFSRNTPLLL----- 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                   +     F       V        I L     +++AE  RSGL AV R Q E 
Sbjct: 71  --------QLFFLFFGLPRVGIVLSSEACATIGLIFLGGSYMAESFRSGLEAVSRTQREV 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +++GL   +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 123 GLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKETSVFSAVALADLMFVAKDLIGL 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +    +L+ +  YL + + I+L  + +  ++    
Sbjct: 183 YYETDTALLMLVIAYLIILLPISLGFSWIERRLRRAR 219



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           V +   S Y       F+ T ++AF G++ +  +G LV   R     ++  +   Y+E  
Sbjct: 4   VNWDVVSDYYPLYQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKIPVLKPLATAYIEFS 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFL+  +  V  +         G+          +      A
Sbjct: 64  RNTPLLLQLFFLFFGLPRVGIVLSSEACATIGLIFLGGSYMAESFRSGLEA 114


>gi|261377616|ref|ZP_05982189.1| amino acid ABC transporter, permease protein [Neisseria cinerea
           ATCC 14685]
 gi|269146369|gb|EEZ72787.1| amino acid ABC transporter, permease protein [Neisseria cinerea
           ATCC 14685]
          Length = 222

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             ++  F +  +  + ++   + 
Sbjct: 24  QISLASVAASCVLGTLFGLVLHSRNRLIR----------FVGRFYLETIRIVPILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIDG-------FWVCVWVFTMWGIAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+  +  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRGQVFRYIELPQSIRRVLPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQK 219



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 39/82 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++ + +  + ++GTL G    S N+L+ ++ R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLASVAASCVLGTLFGLVLHSRNRLIRFVGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIDGFWVCVWVFTMW 99


>gi|323126802|gb|ADX24099.1| hypothetical protein SDE12394_02845 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 215

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 27/211 (12%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S + G +L++      R+ H K    +  +YI                      
Sbjct: 25  LAVIILSTLFGTLLAVM-----RNSHSKPLGLIASIYIEFVR------------------ 61

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P L     I          +   A + +T+A +AEI+R GL AV  GQ EA ++ G T
Sbjct: 62  NVPNLLWIFIIFLVFKMESITAGITAFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFT 121

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQA-- 363
           H +   L++ PQA R ++P + SQ++ ++K++SL    +   +L      ++ +  +   
Sbjct: 122 HFQVFCLIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVLAIQELFGNSQILMGRYFEPKD 181

Query: 364 -IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +  I   +Y  +++ I+ F   L  K A
Sbjct: 182 VFLLYGIVAGLYFLINMSISQFSRTLAKKWA 212



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 32/54 (59%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           ++ + +I +T+ GTL+   R S +K +  I  +Y+E  RN+P L+ IF ++   
Sbjct: 23  ISLAVIILSTLFGTLLAVMRNSHSKPLGLIASIYIEFVRNVPNLLWIFIIFLVF 76


>gi|15890313|ref|NP_355985.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158516|gb|AAK88770.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 217

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 14/228 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L+F          +   +   G ++ +    +   F      +LPL ++ 
Sbjct: 1   MFETALTWSDLAFLAKGAGMTLAVTAVAVTAGTIMGIIFGII--RFQFGPYWSLPLTFV- 57

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +   +P L+ + L         +             P F +  + LS YTAA+  EIV
Sbjct: 58  LDIFRSVPLLIQLVLGNAFQSIAKLGW-----------PPFTTSCVVLSLYTAAYCTEIV 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ AVP     A  +LG+T  +  R ++LP A R  +P      L ++K+S+L + +G
Sbjct: 107 RGGIGAVPSNTRRACRSLGMTWSQDMRYIVLPLATRVSLPSWIGLTLGVMKDSALVLWLG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L+     ++ +  + + I++I   IY  +S  IA F   L  + +
Sbjct: 167 LIELLRASQILVTRLQEPLTILMICGAIYFLISFPIARFGGYLERRWS 214


>gi|227514609|ref|ZP_03944658.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
 gi|227087020|gb|EEI22332.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus fermentum ATCC 14931]
          Length = 223

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 13/219 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+      F+ + +LG+ L     R       K G    L  +   ++ G P L
Sbjct: 11  LRGFPVTLTLLLVSFILASLLGVALGWLYLR-------KNGLLSGLARVYLGIVRGTPPL 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +++ L Y            N  G S +        I L    +A++AE  RS  +AV +G
Sbjct: 64  LMLLLSYYGLPALLKGVGINIDGWSKM----TFGIIGLMVGWSAYLAEAFRSAYLAVDQG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EAA+A+G+T R+A   +++PQA    +P + + ++ L+K +SL   +G  D+ +    
Sbjct: 120 QLEAALAVGITPRRAFFRIIVPQAALIALPNIENLFIGLVKGTSLVYVLGLYDMYNEASN 179

Query: 356 IINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + NQT     ++I +I   IY +  ++I      +  + 
Sbjct: 180 LSNQTNGIYQLQIFIILALIYWAFVLLIEWGFRTIAHRY 218



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 76/200 (38%), Gaps = 9/200 (4%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
             + IL GF  T  L     I A+++G  +G   L  N L++ + RVY+ + R  PPL++
Sbjct: 6   IMSVILRGFPVTLTLLLVSFILASLLGVALGWLYLRKNGLLSGLARVYLGIVRGTPPLLM 65

Query: 145 IFFLYKSVLS----VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           +   Y  + +    V    D    + FG+     G S        +A + V    L   L
Sbjct: 66  LLLSYYGLPALLKGVGINIDGWSKMTFGIIGLMVGWSAYLAEAFRSAYLAVDQGQLEAAL 125

Query: 201 SLFATRLSRHFHEKTGK----ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL-GQFN 255
           ++  T     F     +    ALP +      +    +LV +   Y ++ +   L  Q N
Sbjct: 126 AVGITPRRAFFRIIVPQAALIALPNIENLFIGLVKGTSLVYVLGLYDMYNEASNLSNQTN 185

Query: 256 FIGGSTVSPEFMSLYIALSC 275
            I    +      +Y A   
Sbjct: 186 GIYQLQIFIILALIYWAFVL 205


>gi|146278535|ref|YP_001168694.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556776|gb|ABP71389.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 392

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 19/278 (6%)

Query: 124 LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
           L+     +       + P++   FL   +   L          +   + +       L +
Sbjct: 130 LLHRFGTIAAVAGAVLIPILWWLFLAGDLSRDLAGLLGRSAPLWLEPVRSDKFGGFVLAI 189

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                    S  LGI+L+L      R       KAL + +I       L TL+  A    
Sbjct: 190 TIGVSGIALSLPLGIMLAL-----GRRSDMFLIKALSVSFIEFIRGVPLITLLFTASLLL 244

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            +F  P           T     + + I ++ + AA+IAE++R GL A+PRGQ EAA AL
Sbjct: 245 NYFLPP----------GTTFDIILRVIIMVTLFAAAYIAEVIRGGLAALPRGQYEAADAL 294

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-LVSVGGTIINQT-- 360
           GL + +A RL++LPQA++  IP + S ++ L K+++L V VG  D L  +   +   T  
Sbjct: 295 GLDYWRAQRLIILPQALKISIPGIVSTFIGLFKDTTLVVFVGLLDPLKGITDAVRASTDW 354

Query: 361 -GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            G   E  +    I+ + +  ++ +   L  ++    +
Sbjct: 355 KGIYWEPYIFVGLIFFAFNFAMSRYSMYLERRLKTDHR 392


>gi|326803172|ref|YP_004320990.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650650|gb|AEA00833.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 229

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 7/231 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL-PLLYISTFLI 229
           ++   +     T+     + +F FV+ +V SL    +      K    + PLL I +  +
Sbjct: 1   MDFGFIINILPTLLKTLPLTLFVFVVALVGSLLLAVIVASLQVKKIPIVDPLLRIYSSFM 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P ++ + + Y   +  P + +   I   T + +  +  IAL  Y  AF+AEI+R   
Sbjct: 61  RSTPGIIHLFVAY---YGIPFVLRPFHISLGT-NSQVTAAIIALVAYNGAFMAEIIRPAY 116

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +AV + Q EAA++LG+   +    ++ PQ +   +P LT+  ++LLK++SL   +G  DL
Sbjct: 117 LAVGQDQKEAALSLGMIAWQRNWRIIFPQIIPIALPSLTTAVIDLLKDTSLLFLIGLVDL 176

Query: 350 VSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +     II        +E+      IY ++S ++ L    L  + A+  ++
Sbjct: 177 MGQAEIIIANNYGLYQVEVYFAIALIYWAMSSLLILISKLLENRYAMIWRR 227


>gi|241766694|ref|ZP_04764535.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241362977|gb|EER58662.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 220

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 89/223 (39%), Gaps = 14/223 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +     +   +  LG++L + A    R +     +     Y+  F       
Sbjct: 11  QWPMLAHGLVLTVVLTGIAIPLGVLLGI-ACAWCRLYGAAPLRFAVAAYVEVFRNTPFI- 68

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
                  + L F  P L       G  +SPE ++  +A+     A+  E VR+G+ A   
Sbjct: 69  ----IQLFFLFFGLPSL-------GVRLSPE-VASVLAMMLNLGAYACEQVRAGIEATLH 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA  L L+       V+LP ++  + P L  Q + ++  SS+   +   ++     
Sbjct: 117 GQIEAAQCLALSPWHIFTRVVLPPSLGRVWPSLVGQTIIVMLGSSVCSQISTEEISYAAN 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            I ++T ++ E  ++   +YL L++++   +N    +     +
Sbjct: 177 LISSRTFRSFESYILVTVVYLGLAVVLRQLLNWAGPRWVFGRR 219


>gi|229844867|ref|ZP_04465005.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           6P18H1]
 gi|229812248|gb|EEP47939.1| arginine transporter permease subunit ArtM [Haemophilus influenzae
           6P18H1]
          Length = 222

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 6/202 (2%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           +   L+LF T L    ++   +A+ L      L  G P LV   L Y            +
Sbjct: 26  IAFCLALFLTFLLSMENKWVKRAVNL---YLTLFTGTPLLVQFFLIYAGP--GQFQWIID 80

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
                 +S  +    +AL+  +AA+  ++    + A+P+GQ E+  ALGL   +    +L
Sbjct: 81  SPLWYVLSNAWFCAALALALNSAAYSTQLFHGAVKAIPKGQWESCGALGLNRIQTL-KIL 139

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +P A++  +P  +++ + + K ++LA  +   D++     +      A+ I  I   IYL
Sbjct: 140 IPYALKRALPSYSNEIILVFKGTALASTITIMDIMGYARQLYGTEYDALTIYGIAGGIYL 199

Query: 376 SLSIMIALFMNRLNAKIALKEK 397
            ++ +  L + +L  K+   E+
Sbjct: 200 IITGIATLLLRKLEKKVLAFER 221


>gi|222086404|ref|YP_002544938.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221723852|gb|ACM27008.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 223

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 87/219 (39%), Gaps = 14/219 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F               +    ++ +   V+GI L + A   +R    +  + +   Y+  
Sbjct: 5   FDFGWLAEYYPVLIKGVLVTIELTLVGAVVGIALGI-ACAWARALGPRWLQPIVATYVEL 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                                +     F   G      E  +  +A+     A+  EI+R
Sbjct: 64  IRNTPFLI-------------QLFFIFFGLPGIGIHMSEITAANLAMIVNLGAYSCEIIR 110

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ A PRGQ EA  +L +T  +  R V+L  +++ I P L+SQ + ++  S++   +  
Sbjct: 111 AGIQATPRGQFEAGASLAMTPFETFRHVILVPSLQRIWPALSSQVVIVMLGSAVVSQIAA 170

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            DL      I +++ +A E   +   IYL L+I++   +
Sbjct: 171 EDLTFAANFIQSRSFRAFEAYFVSTAIYLLLAIILRQLL 209



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G + T  L   G +    +G      R    + +  I   YVE+ RN P L+ 
Sbjct: 13  YYPVLIKGVLVTIELTLVGAVVGIALGIACAWARALGPRWLQPIVATYVELIRNTPFLIQ 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +FF++  +  +             M +N
Sbjct: 73  LFFIFFGLPGIGIHMSEITAANLAMIVN 100


>gi|171741000|ref|ZP_02916807.1| hypothetical protein BIFDEN_00062 [Bifidobacterium dentium ATCC
           27678]
 gi|306823351|ref|ZP_07456726.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|309802751|ref|ZP_07696855.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|171276614|gb|EDT44275.1| hypothetical protein BIFDEN_00062 [Bifidobacterium dentium ATCC
           27678]
 gi|304553058|gb|EFM40970.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Bifidobacterium dentium ATCC 27679]
 gi|308220815|gb|EFO77123.1| ABC transporter, permease protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 224

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+       V S  +G+++           +    + L  +Y+    I     L
Sbjct: 17  LQGLWVTVWIAGVSVVLSVPVGLIVGWLM-----TMNNPVIRLLTRIYLDFIRIMPQLAL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + IA      F +      +  G         +       +  A + ++VR  L ++P  
Sbjct: 72  LFIAFY---GFARAWNWNLDATG---------ACVFVFVLWGGAELGDLVRGALESIPDA 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGL   +    V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  
Sbjct: 120 QYESAYVLGLGPWQTFTRVILPQALRRLLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQ 179

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+            I  +  F+Y  +   +++   RL  + +
Sbjct: 180 IIDANRFQYPTGTLWIYGVIFFMYFIVCWPLSIVARRLEKRWS 222



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W+A   ++ +  +G +VG      N ++  + R+Y++  R +P L ++F  
Sbjct: 16  LLQGLWVTVWIAGVSVVLSVPVGLIVGWLMTMNNPVIRLLTRIYLDFIRIMPQLALLFIA 75

Query: 149 YKSVLSVLPI 158
           +         
Sbjct: 76  FYGFARAWNW 85


>gi|331697743|ref|YP_004333982.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
 gi|326952432|gb|AEA26129.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
          Length = 299

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 17/262 (6%)

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
            I  LVV+  +   V  +         L   +      L      ++T    F  + VL 
Sbjct: 22  VIGTLVVLGIIGFVVYRLAATGQFEPRLWEWLQFRAIQLLIVDALLNT-LSAFGVAAVLS 80

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +V         R       +      +  F         L+ L + L+F        N  
Sbjct: 81  LVFG-AIFAAGRMSDHAWLRGPSTAIVEFFRAVP-----LLILIFILYFGVSQTLGLNL- 133

Query: 258 GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLP 317
                   + SL + L  Y  + +AE+ R+G+ A+PRGQ EAA ALGL   +    VLLP
Sbjct: 134 ------STYWSLVLGLMLYNGSVLAEVFRAGVRALPRGQSEAAYALGLRKTQVMTNVLLP 187

Query: 318 QAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---AIEIILIWMFIY 374
           Q++R+++P + SQ + +LK+++L   + + +L+     + +Q       +++ ++   +Y
Sbjct: 188 QSLRAMLPTIVSQLVVVLKDTALGFIILYPELLYQARYLGSQGQLGAPILQVAIVIAVLY 247

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
           + + ++++     L  +   + 
Sbjct: 248 ILMCLLLSGLAQLLEKRSRRRR 269



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 23/145 (15%)

Query: 16  MKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      RV N  + +I  L++  I  + V  +                   A  
Sbjct: 2   TSVLYDVPGPRARVRNGLIGVIGTLVVLGIIGFVVYRLA------------------ATG 43

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           + +  +  +    +    I+   +NT        + + + G +  AGR+S +  +     
Sbjct: 44  QFEPRLWEWLQFRAIQLLIVDALLNTLSAFGVAAVLSLVFGAIFAAGRMSDHAWLRGPST 103

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSV 155
             VE FR +P L++IF LY  V   
Sbjct: 104 AIVEFFRAVPLLILIFILYFGVSQT 128


>gi|227431661|ref|ZP_03913695.1| amino acid ABC superfamily ATP binding cassette transporter,
           pemease component [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227352582|gb|EEJ42774.1| amino acid ABC superfamily ATP binding cassette transporter,
           pemease component [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 186

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 18/196 (9%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSF---VLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F     L +    M       +FS    V G +  L    L R         +   YI  
Sbjct: 3   FSYEMILDYAPFFMHGLLYTLLFSLCGVVFGTIFGLII-ALGRMSKNPVISGIFKTYIGL 61

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYTAAFIAEIV 285
           F   G P  V I +             F  +          ++  ++LS   AA+IAE  
Sbjct: 62  F--RGTPLFVQILI-----------TNFGVVPAIFGHSNLYIAGALSLSLNAAAYIAETF 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+ ++  GQ EA+  LGL+     R +++PQA++ +IP L +++++L+K+SSL  A+ 
Sbjct: 109 RSGIQSISEGQREASRTLGLSQFDTMRFIIVPQAIKIVIPALGNEFISLIKDSSLVSAIS 168

Query: 346 FADLVSVGGTIINQTG 361
             ++      +  Q  
Sbjct: 169 GPEITYWAQAMNAQYY 184



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 38/80 (47%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           YA   + G + T   +  G++  TI G ++  GR+S N +++ I + Y+ +FR  P  V 
Sbjct: 11  YAPFFMHGLLYTLLFSLCGVVFGTIFGLIIALGRMSKNPVISGIFKTYIGLFRGTPLFVQ 70

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           I      V+  +    +  +
Sbjct: 71  ILITNFGVVPAIFGHSNLYI 90


>gi|150397301|ref|YP_001327768.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150028816|gb|ABR60933.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 376

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 19/210 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + S  +GI+L+    R SR    +        +I    I  + ++ LI + Y +    PV
Sbjct: 183 IVSLPVGILLAF--GRRSRFSSMR--------WICMGYIEVMRSVPLIMVVYWIWILMPV 232

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L     +       + +   I  + + +A++AE VRSGL AVPR Q EAA +LG++    
Sbjct: 233 LAPQFGL------ADVVRGMIGFTLFYSAYVAEYVRSGLQAVPREQTEAARSLGMSEFDI 286

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEII 367
            R ++LPQA+R  +PPL    L++   + L   +G  D +  G  I+       +  E+ 
Sbjct: 287 NRSIVLPQALRVAVPPLVGNVLDIFNTAPLVFIIGLTDFLRAGQMILANPQYGDRTYEVY 346

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                 Y  +  +I     RL   +A   +
Sbjct: 347 AFLFLTYFLVGSLITFVARRLETHLARGNR 376


>gi|55821173|ref|YP_139615.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55823086|ref|YP_141527.1| amino acid (glutamine) ABC transporter permease [Streptococcus
           thermophilus CNRZ1066]
 gi|116627890|ref|YP_820509.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|55737158|gb|AAV60800.1| polar amino acid ABC uptake transporter membrane-spanning protein
           [Streptococcus thermophilus LMG 18311]
 gi|55739071|gb|AAV62712.1| amino acid (glutamine) ABC transporter permease protein
           [Streptococcus thermophilus CNRZ1066]
 gi|116101167|gb|ABJ66313.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 216

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 94/216 (43%), Gaps = 27/216 (12%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+  +  I V S + G +L++      R+      + +  +Y+    +  +P L+ I 
Sbjct: 18  WTTLYLSFFIIVLSTLFGTILAVM-----RNGKNPILRWIASIYVEF--VRNVPNLLWIF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + + +   K                   +   + + +T+A +AEI+R GL ++  GQ EA
Sbjct: 71  IIFLVFQLKST----------------AAGITSFTVFTSAALAEIIRGGLNSIDHGQTEA 114

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIIN 358
            ++ G  +R+    ++ PQA+R ++P + SQ++ ++K++S L   +   +L      ++ 
Sbjct: 115 GLSQGFNNRQIFIYIIFPQAIRKMLPSIISQFVTVVKDTSFLYSVIALQELFGKSQILMG 174

Query: 359 QTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +      +  I    Y  ++  I+ +   L+  
Sbjct: 175 GYYEPSQIFTLYGILALAYFVVNFAISSYSRYLSKH 210



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    +  G   T +L+F  ++ +T+ GT++   R   N ++ WI  +YVE  RN+P 
Sbjct: 6   SATNLKFLAQGLWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYVEFVRNVPN 65

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 66  LLWIFIIFLVF 76


>gi|121606947|ref|YP_984276.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120595916|gb|ABM39355.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 218

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 89/213 (41%), Gaps = 14/213 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                   +   A +   +  +G  L + A   SR       +A+   Y+          
Sbjct: 11  QWPMLLRGLALTALLTAVAAPVGTCLGI-ACAWSRVHGPAWLRAMVGAYVELVRNTPFII 69

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
            +            P +       G  +SPE ++  +A+     A+  EIVR+G+ +   
Sbjct: 70  QLFFIFF-----GLPAM-------GVKLSPE-IASMLAMVLNLGAYACEIVRAGIESTHP 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA +L L   +    V+LP ++  + P L SQ + ++  S++   +   ++     
Sbjct: 117 GQIEAAQSLALNRWQIFTRVVLPPSLERVWPALVSQIIIVMLGSAVCGQISTEEISYAAN 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            I ++T +++E  ++   +YL L++++   ++ 
Sbjct: 177 LISSRTFRSMESYILVTLVYLGLAVLVRQVLHW 209


>gi|152998088|ref|YP_001342923.1| polar amino acid ABC transporter inner membrane subunit
           [Marinomonas sp. MWYL1]
 gi|150839012|gb|ABR72988.1| polar amino acid ABC transporter, inner membrane subunit
           [Marinomonas sp. MWYL1]
          Length = 372

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 98/278 (35%), Gaps = 31/278 (11%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           E +R      V  F +  + S        +     + +    L       +  +   +  
Sbjct: 106 EQWRVNSAFAVGLFAFPLLFSQRIPQKWIVAYILVLPVVLWLLLKGGFIFEDISTSALGG 165

Query: 194 FVLGIVLSLFAT----------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             L   L + A            L R       +     YI       + T + +A    
Sbjct: 166 LTLTFFLGIIAMCLSLPVSILLALGRQSQLPILRWACTGYIEIIRSVPVITFLFMA---- 221

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L    F+           +   L   +A + AEI+R  + AVP+GQ+EA+ A+
Sbjct: 222 ------SLVLQLFLPSGVSIDVLFRVLFVLIFVSAVYKAEIIRGAIQAVPKGQIEASYAM 275

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G  + K    V++PQA+R+ +P L + ++ L K ++L + +G  +++      IN T   
Sbjct: 276 GCGYWKTMAYVVMPQALRNSVPALITNFIGLFKETTLVMILGLLEVMGA----INATFHN 331

Query: 364 IEII-------LIWMFIYLSLSIMIALFMNRLNAKIAL 394
            E +       ++    +      IA +   L  +I  
Sbjct: 332 AEWLGLHAEGPIVISAFFFIACFSIAQYGAYLERRIKR 369



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 73/195 (37%), Gaps = 5/195 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   TF+L    M  +  +  L+  GR S   ++ W C  Y+E+ R++P +  +F   
Sbjct: 163 LGGLTLTFFLGIIAMCLSLPVSILLALGRQSQLPILRWACTGYIEIIRSVPVITFLFMAS 222

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +   LP      VL   +F+     +     +   A   V    +    ++       
Sbjct: 223 LVLQLFLPSGVSIDVLFRVLFVLIFVSAVYKAEIIRGAIQAVPKGQIEASYAMGCGYWKT 282

Query: 210 HFHEKTGKAL----PLLYISTFLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGSTVSP 264
             +    +AL    P L  +   +F   TLV+I  L   +           ++G     P
Sbjct: 283 MAYVVMPQALRNSVPALITNFIGLFKETTLVMILGLLEVMGAINATFHNAEWLGLHAEGP 342

Query: 265 EFMSLYIALSCYTAA 279
             +S +  ++C++ A
Sbjct: 343 IVISAFFFIACFSIA 357


>gi|104773437|ref|YP_618417.1| amino acid ABC transporter permease [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|103422518|emb|CAI97092.1| Amino acid ABC transporter, permease protein [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 230

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S ++G+ +      L R    K  + +  +Y+  F 
Sbjct: 14  VLFEGSNFARLMAGLWTSIWIAAISLIIGLAIGTIFGIL-RTLTNKIIRFVLRIYLEFFR 72

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        I L Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 73  IVPT-----IVLLYLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEFSDIVRGA 120

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 121 IESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIME 180

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++VG  II    Q        +  +   +Y  L   ++ +  +L  
Sbjct: 181 VINVGQQIIEANNQQYPTGVFWVYGLIFILYFVLDYPLSAWAKKLTK 227



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 42/85 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +I    IGT+ G  R   NK++ ++ R+Y+E FR +P +V+++ +
Sbjct: 24  LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFVLRIYLEFFRIVPTIVLLYLV 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   +  +    F   
Sbjct: 84  YYILPRTFHVNWPATWMAVLAFSLW 108


>gi|307708868|ref|ZP_07645328.1| hypothetical protein SMSK564_0113 [Streptococcus mitis SK564]
 gi|307620204|gb|EFN99320.1| hypothetical protein SMSK564_0113 [Streptococcus mitis SK564]
          Length = 158

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 12/160 (7%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            + L + ++F        N  G         S  I  + +  A + ++VR  + ++P+ Q
Sbjct: 3   QLVLLFIVYFGLARNFNINISGE-------TSAIIVFTLWGTAEMGDLVRGAITSLPKHQ 55

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            E+  ALGLT+ +    +++PQ +R ++P   +    ++K +SL V +G  ++  VG  I
Sbjct: 56  FESGQALGLTNVQLYYHIIIPQVLRRLLPQAINLVTRMIKTTSLVVLIGVVEVTKVGQQI 115

Query: 357 INQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           I+     I      I    + +Y ++   I+     L   
Sbjct: 116 IDSNRLTIPTASFWIYGTILVLYFAVCFPISKLSTHLEKH 155


>gi|260754501|ref|ZP_05866849.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella
           abortus bv. 6 str. 870]
 gi|260674609|gb|EEX61430.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella
           abortus bv. 6 str. 870]
          Length = 280

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/100 (54%), Positives = 73/100 (73%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI GLP L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR
Sbjct: 147 ALIIGLPILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVR 206

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +G++ V +GQ EAA A+GL   +  RL+++PQA+R IIPP
Sbjct: 207 AGVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPP 246


>gi|83748011|ref|ZP_00945041.1| Transporter [Ralstonia solanacearum UW551]
 gi|207738691|ref|YP_002257084.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725313|gb|EAP72461.1| Transporter [Ralstonia solanacearum UW551]
 gi|206592059|emb|CAQ58965.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 230

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R    +  + + + ++S   I G P L+ + L Y +    P L   +           
Sbjct: 49  WARLSRYRLLRGMVMAWVSA--IRGTPALIHLLLAYYV---VPPLLGLSI-------SPL 96

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +   AL+C T+A++ EI+R  L +VP  Q  AA ALG+   +  R VLLPQ     IPP
Sbjct: 97  TAGIGALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAIPP 156

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++  LLK SSL   +   +L +V      Q+   +++  +   +Y  +   ++    
Sbjct: 157 LTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQVFAMTAAVYFVILSCVSAASR 216

Query: 387 RLNAKIAL 394
               +++ 
Sbjct: 217 VCERRVSW 224


>gi|254422244|ref|ZP_05035962.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
 gi|196189733|gb|EDX84697.1| ABC transporter, permease protein [Synechococcus sp. PCC 7335]
          Length = 531

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 19/263 (7%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM-FLNNRGLSFPTLTMDTNAKIFVF 192
           +   NI  + +    +  V  ++      + L FG+  +        TLT+         
Sbjct: 279 QTLENIGRIALFLIGFAGVFVLMGWLPAMLGLEFGLETVRTNSWGGLTLTLFLAISGIAL 338

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F  G++L+L      R       +   + YI            LI++ +      P+  
Sbjct: 339 CFPAGVLLAL-----GRRSKLPLIRMFSVTYIELVRGVP-----LISILFMGQVLIPL-- 386

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
              F+         +   I L+ ++AA++AE VR+GL +VP+GQ EAA +LGL       
Sbjct: 387 ---FLPEGMRPDPVVRAIIGLTIFSAAYLAENVRAGLQSVPQGQGEAAQSLGLNKPLTMA 443

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILI 369
           L++LPQA+++ IP +  Q+++L ++++L   VG  +L+ +   ++   N  G      + 
Sbjct: 444 LIVLPQALKTAIPAIVGQFISLFQDTTLLGIVGLLELLGITRNLLANPNYLGDFAPAYVF 503

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              IY      ++    R+ A +
Sbjct: 504 IGVIYWVFCYGMSYGSRRVEAAL 526



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 95/278 (34%), Gaps = 31/278 (11%)

Query: 32  ILALLLTVIFLWCVN--NVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD-----SS 84
           I+ +LL V  +W  +      N+ +  L     FL   AG  +  G +P          +
Sbjct: 262 IVGILLGVALIWVFSDSQTLENIGRIAL-----FLIGFAGVFVLMGWLPAMLGLEFGLET 316

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
             T    G   T +LA SG+      G L+  GR S   L+      Y+E+ R +P + +
Sbjct: 317 VRTNSWGGLTLTLFLAISGIALCFPAGVLLALGRRSKLPLIRMFSVTYIELVRGVPLISI 376

Query: 145 IFFLYKSVLSVLPIPDHS------------IVLPFGMFLNNRGLSFPTLTMDTNAKIFVF 192
           +F     +   LP                     +       GL          A+    
Sbjct: 377 LFMGQVLIPLFLPEGMRPDPVVRAIIGLTIFSAAYLAENVRAGLQSVPQGQGEAAQSLGL 436

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           +  L + L +    L        G+ + L   +T        L ++ L   L   + +L 
Sbjct: 437 NKPLTMALIVLPQALKTAIPAIVGQFISLFQDTT-------LLGIVGLLELLGITRNLLA 489

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             N++G    +  F+ +   + CY  ++ +  V + L 
Sbjct: 490 NPNYLGDFAPAYVFIGVIYWVFCYGMSYGSRRVEAALN 527


>gi|324992109|gb|EGC24031.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK405]
 gi|324994203|gb|EGC26117.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK678]
 gi|325693722|gb|EGD35641.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK150]
 gi|327459420|gb|EGF05766.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327472828|gb|EGF18255.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 225

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 22/219 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S +LG +  +         H K  + L   Y+    +      
Sbjct: 19  LQGLGVTIGISILSVIISLILGTIFGIIM-----TSHSKVVRFLSRAYLEFIRVMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G        +S  I  S +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFLVYFGLARNFDINISGE-------LSAIIVFSLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+ R+    +++PQ +R ++P   +    ++K +SL V +G  ++V VG  
Sbjct: 122 QFESGQALGLSQRQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLN 389
           II+    +I      I    + +Y ++   I+   + L 
Sbjct: 182 IIDSNRLSIPSAAFWIYGCILLLYFAVCFPISKLSSYLE 220



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   +I + I+GT+ G    S +K+V ++ R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVIISLILGTIFGIIMTSHSKVVRFLSRAYLEFIRVMPQLVLLFLV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|295693351|ref|YP_003601961.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
 gi|295031457|emb|CBL50936.1| Amino acid ABC transporter, permease protein [Lactobacillus
           crispatus ST1]
          Length = 223

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S V+G+ +      L R F  +  + +  LY+  F 
Sbjct: 8   VLFEGSNFARLMAGLWTSIWIAALSLVIGLAVGTIFGIL-RTFKNRPLRFVLRLYLEFFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I     L+     Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  IVPTVVLL-----YLVYYILPRSLHVNW-------PATWMAVLAFSMWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP+ Q E+ +ALGL   +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 115 LESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIKTTSLLMIINIME 174

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++VG  II    Q        +      +Y  L   ++ +  RL AK
Sbjct: 175 VINVGQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 222



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 42/85 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   ++    +GT+ G  R   N+ + ++ R+Y+E FR +P +V+++ +
Sbjct: 18  LMAGLWTSIWIAALSLVIGLAVGTIFGILRTFKNRPLRFVLRLYLEFFRIVPTVVLLYLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +   L +   +  +    F   
Sbjct: 78  YYILPRSLHVNWPATWMAVLAFSMW 102


>gi|300812424|ref|ZP_07092854.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496591|gb|EFK31683.1| conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 230

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S ++G+ +      L R    K  +    +Y+  F 
Sbjct: 14  VLFEGSNFARLMAGLWTSIWIAAISLIIGLAIGTIFGIL-RTLTNKIIRFALRIYLEFFR 72

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        I L Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 73  IVPT-----IVLLYLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEFSDIVRGA 120

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 121 IESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIME 180

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++VG  II    Q        +  +   +Y  L   ++ +  +L  
Sbjct: 181 VINVGQQIIEANNQQNPTGVFWVYGLIFILYFVLDYPLSAWAKKLTK 227



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +I    IGT+ G  R   NK++ +  R+Y+E FR +P +V+++ +
Sbjct: 24  LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFALRIYLEFFRIVPTIVLLYLV 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   +  +    F   
Sbjct: 84  YYILPRTFHVNWPATWMAVLAFSLW 108


>gi|218674962|ref|ZP_03524631.1| putative permease component of ABC transporter [Rhizobium etli
           GR56]
          Length = 223

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 14/223 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      +        +    ++     VLGI L +F     R       K +   
Sbjct: 1   MSYHFEFGWLLQYYPDIIKGIFVTLELIAVGGVLGISLGIF-CAWVRALGPAWLKPVVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  +A+     A+  
Sbjct: 60  YVELIRNTPFLI-------------QLFFIFFGLPSLGLHLSELTAANLAMVVNLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I P L+SQ + ++  SS+  
Sbjct: 107 EIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +   DL      I ++T +A E   +   IYL+L+I++   +
Sbjct: 167 QIAAEDLTFAANFIQSRTFRAFEAYFVSTAIYLALAILLRQVL 209


>gi|254250415|ref|ZP_04943734.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
 gi|124879549|gb|EAY66905.1| ABC-type amino acid transport system, permease component
           [Burkholderia cenocepacia PC184]
          Length = 244

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 102/220 (46%), Gaps = 9/220 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +    +T++ +    + S   G+ L+ +    S                   +    PT
Sbjct: 29  FVHGMGVTLELSIATALGSLACGVALAAWLVSPSAALARPA-------RAFVEVTRNTPT 81

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV +   + L  +  +      +GG+ ++P F+   I +S +  AF AE +R+GL AVPR
Sbjct: 82  LVQLFCAF-LVVNMLISAALRDLGGNPLTP-FIWSVIVISLHKGAFHAEALRAGLEAVPR 139

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
             +EAA +LG + R+    V LP A+R  +P L +  ++L+K +++A A+   D+     
Sbjct: 140 ATLEAAQSLGYSRRQRLWHVQLPLAVRFALPALVNNLVDLVKMTTVASAIAVGDVTYASI 199

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            I  Q    +E++++ +  + +L+  + L    L  ++ +
Sbjct: 200 MIWTQRDNVLELMILILLFFGALTFTVNLAGRWLEHRLRI 239



 Score = 36.8 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + G   T  L+ +  + +   G  + A  +S +  +A   R +VEV RN P LV +F  
Sbjct: 29  FVHGMGVTLELSIATALGSLACGVALAAWLVSPSAALARPARAFVEVTRNTPTLVQLFCA 88

Query: 149 YKSV 152
           +  V
Sbjct: 89  FLVV 92


>gi|312278471|gb|ADQ63128.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus ND03]
          Length = 216

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 94/219 (42%), Gaps = 27/219 (12%)

Query: 177 SFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                T+  +  I V S + G +L++      R+      + +  +YI    +  +P L+
Sbjct: 15  QGMWTTLYLSFFIIVLSTLFGTILAVM-----RNGKNPILRWIASIYIEF--VRNVPNLL 67

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            I + + +   K                   +   + + +T+A +AEI+R GL ++  GQ
Sbjct: 68  WIFIIFLVFQLKST----------------AAGITSFTVFTSAALAEIIRGGLNSIDPGQ 111

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGT 355
            EA ++ G  +R+    ++ PQA+R ++P + SQ++ ++K++S L   +   +L      
Sbjct: 112 TEAGLSQGFNNRQIFIYIIFPQAIRKMLPSIISQFVTVVKDTSFLYSVIALQELFGKSQI 171

Query: 356 IINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++    +      +  I    Y  ++  I+ +   L+  
Sbjct: 172 LMGGYYEPSQIFTLYGILALAYFVVNFAISSYSRYLSKH 210



 Score = 54.2 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 38/71 (53%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            ++    +  G   T +L+F  ++ +T+ GT++   R   N ++ WI  +Y+E  RN+P 
Sbjct: 6   SATNLKFLAQGMWTTLYLSFFIIVLSTLFGTILAVMRNGKNPILRWIASIYIEFVRNVPN 65

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 66  LLWIFIIFLVF 76


>gi|222081570|ref|YP_002540934.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221726249|gb|ACM29338.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 230

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 7/223 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+     IF+ S ++G + ++   R          + L + Y   F     
Sbjct: 12  WDILGAVPVTLAMALAIFILSTIVGSLFAMAEYR-----RVPVLRELVVAYKIVFK-GVP 65

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFI-GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
             +V+    Y L      L     +      +P +++L +AL+   AAF AE+V+  L +
Sbjct: 66  MVIVIFLAYYGLPPALHFLSSLVGVEFNGHATPNWVTLIVALTLCVAAFQAEVVKGALNS 125

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
              GQ +AA +LG    +  R V+LPQ + + IP L +  + ++K  SL  A+   D+ +
Sbjct: 126 FDTGQADAAYSLGYKRSQLFRRVMLPQVIVAAIPDLANSIMVIMKALSLGFAIEVVDIFA 185

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                       +E  LI + +Y+ ++ ++    +R+   + +
Sbjct: 186 QSQLTAALNFYYLEAFLIAVVVYMVIAYVVTFAADRMERALRV 228


>gi|186470875|ref|YP_001862193.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184197184|gb|ACC75147.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 221

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + + VLG+        L R  + +   A   +++  +LI G+P L  + + Y  
Sbjct: 17  VTLEVSLIAAVLGMGGGFALNGL-RLRYARVLAAPYRVFV--WLIRGMPYLSQLMIVY-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F             +  ++L+ Y +A+ AEI R+   +VPRGQ+EAA A G
Sbjct: 72  ---------FGLPAFGITMTAVQATVVSLAIYASAYFAEIFRAAWASVPRGQIEAAQAFG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++   A R + LPQA+   +P L +Q + ++K S++A  +   +L      I+  T   +
Sbjct: 123 VSRWAAFRAIELPQALAFAVPLLANQIILVIKESAVASVITVPELTMTASDIVASTYTYV 182

Query: 365 EIILIWMFIYLSLSIMIALFMNR 387
               + +  Y  L+  ++L + R
Sbjct: 183 GPYTLLIVSYWLLTQAVSLLVQR 205


>gi|330466434|ref|YP_004404177.1| binding-protein-dependent transporter inner membrane component
           [Verrucosispora maris AB-18-032]
 gi|328809405|gb|AEB43577.1| binding-protein-dependent transporter inner membrane component
           [Verrucosispora maris AB-18-032]
          Length = 224

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 8/229 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F + +       +     K+   S V  +VL +    + R       +     +++ F 
Sbjct: 3   VFSDPKNFDAFVSSFLWILKLTGASAVGALVLGVLLAAM-RVSPVPVLRGFGAAWVNIFR 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              L  ++     +  +F   V    +      ++  ++   I LS YTAAF+ E VRSG
Sbjct: 62  NTPLTLVI-----FFCYFGLFVTLGLSLSQDLFLNIYWL-GVIGLSTYTAAFVCEAVRSG 115

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  VP GQ EAA A+GLT  +  R+V+LPQA RS+I P  S  + L KN+++   +G  +
Sbjct: 116 INTVPTGQAEAARAIGLTFAQTLRIVVLPQAARSVIAPFGSILIALCKNATIVGTIGLME 175

Query: 349 LVSVGGTIINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             SV   +IN  G A I I L++   + ++ I    F   L  ++A+K 
Sbjct: 176 SSSVMKDLINFNGDAVIPIFLVFAGTFAAILIPTGYFFGWLANRLAVKR 224



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 45/107 (42%)

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
           SD     A +  F+    L  +  + A ++G L+ A R+S   ++      +V +FRN P
Sbjct: 5   SDPKNFDAFVSSFLWILKLTGASAVGALVLGVLLAAMRVSPVPVLRGFGAAWVNIFRNTP 64

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             +VIFF Y  +   L +     +     +L   GLS  T      A
Sbjct: 65  LTLVIFFCYFGLFVTLGLSLSQDLFLNIYWLGVIGLSTYTAAFVCEA 111


>gi|254459798|ref|ZP_05073214.1| glutamine ABC transporter permease protein [Rhodobacterales
           bacterium HTCC2083]
 gi|206676387|gb|EDZ40874.1| glutamine ABC transporter permease protein [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 277

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 94/256 (36%), Gaps = 13/256 (5%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            ++ IF L         +          +    + L    L +   A       +LG+ +
Sbjct: 34  VILAIFILVPMAPGWEKVQKSFFNKEVFLKTFPKLLDAFLLDVAIFAWCAPLIAILGLAV 93

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +L   R  R       +    LY   F    +   V +          P      +I GS
Sbjct: 94  ALM--RDVRAPALFPLRIFGALYTDIFRGVPVVLTVYLIGFGIPGLGLPRPWNSPYIWGS 151

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                     +AL    +A++AEI RSG+ +V + Q  AA +LGL  R     V+LPQA+
Sbjct: 152 ----------LALILTYSAYVAEIFRSGITSVHQSQRAAAQSLGLAERDVMLFVVLPQAI 201

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM 380
           R ++P   +  + L K+ +L   +G  ++    G   +         +    I+L ++I 
Sbjct: 202 RRVVPAQMNMLIALQKDVALLSFIGPVEIFRQAGVFKSLLAN-FTPYVGAAVIFLCVTIP 260

Query: 381 IALFMNRLNAKIALKE 396
              + + L  K   + 
Sbjct: 261 ATRYADYLMNKQNRER 276


>gi|296111386|ref|YP_003621768.1| putative amino acid ABC transporter, permease protein [Leuconostoc
           kimchii IMSNU 11154]
 gi|295832918|gb|ADG40799.1| putative amino acid ABC transporter, permease protein [Leuconostoc
           kimchii IMSNU 11154]
          Length = 239

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 10/239 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + +PF +      +    +T+       +    LG +L+    +  +  +       PL 
Sbjct: 1   MNIPFLIHTFWLAIQAVPITLLITGSALLIGLPLGFLLAWIKIKKIKVLY-------PLA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLH---FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            I T L+   P ++LI L Y      F+  +    +           +      S    A
Sbjct: 54  VIYTSLMRATPMVLLILLFYSTLPSLFNVILNDHLHLGVKIFDVNPIIYAIAVFSLIAVA 113

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            ++E+ RS ++ V  GQ EAA+ +GL+  +    +++PQA+ S IP + +  LN+LK +S
Sbjct: 114 NLSEVFRSAILTVDSGQQEAAVMVGLSPLQTYYRIIVPQALVSAIPNIGNLTLNILKGTS 173

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA  +   ++ +V  T    T    E  +    +Y  L  ++ +    L   ++  + +
Sbjct: 174 LAFMMTVQEVTAVAKTAAAYTYDYTEAYIDIFIVYFILGAILQIGFKYLERYLSRHKVR 232


>gi|116248755|ref|YP_764596.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253405|emb|CAK11793.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 223

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 14/223 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F               +    ++     VLGI L +F     R       K +   
Sbjct: 1   MSYHFEFGWLLEYYPEIIKGILITLELIAIGGVLGISLGIF-CAWVRALGPAWLKPVVAT 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  +A+     A+  
Sbjct: 60  YVELIRNTPFLI-------------QLFFIFFGLPSLGFKLSELTAANLAMVVNLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I P L+SQ + ++  SS+  
Sbjct: 107 EIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +   DL      I ++T +A E  ++   IYL L+I++   +
Sbjct: 167 QIAAEDLTFAANFIQSRTFRAFEAYIVSTAIYLVLAILLRQLL 209


>gi|290956975|ref|YP_003488157.1| glutamate uptake system [Streptomyces scabiei 87.22]
 gi|260646501|emb|CBG69598.1| glutamate uptake system [Streptomyces scabiei 87.22]
          Length = 295

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 16/237 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         L     T+   A   V +  LG +  +   RLS H   +     P 
Sbjct: 50  WKPFFTSEAWTTYLLPGLANTLKAMAISVVIALPLGALFGIA--RLSDHLWVRV----PA 103

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             +  F       L+++     +     V         +T   +  ++   L  Y A+ +
Sbjct: 104 GAVVEFFRAIPVLLLMLFANEVIARSMNV---------TTEQRQLWAVVAGLVLYNASVL 154

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+VR+G++A+P+GQ EAA A+GL   +    +LLPQA+  ++P + SQ + ++K+++L 
Sbjct: 155 AEVVRAGILALPKGQTEAAQAIGLRKGQTMSFILLPQAVTVMLPAIVSQLVVIVKDTALG 214

Query: 342 VA-VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +GF +L+S   T+       +   ++   IY+ L+ +I  F + L  ++   +K
Sbjct: 215 GVMIGFTELLSGRATLAAVYANVVPSFVVVAIIYIILNFIITSFASWLEQRLRRGKK 271



 Score = 61.9 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 39/91 (42%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             P+ +  ++ T +L G  NT       ++ A  +G L G  RLS +  V       VE 
Sbjct: 50  WKPFFTSEAWTTYLLPGLANTLKAMAISVVIALPLGALFGIARLSDHLWVRVPAGAVVEF 109

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLP 166
           FR IP L+++ F  + +   + +      L 
Sbjct: 110 FRAIPVLLLMLFANEVIARSMNVTTEQRQLW 140


>gi|299541861|ref|ZP_07052184.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
 gi|298725599|gb|EFI66240.1| amino-acid ABC transporter permease protein [Lysinibacillus
           fusiformis ZC1]
          Length = 233

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 92/234 (39%), Gaps = 5/234 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F +      LS   + +       V +  LG +L+L     +R         L  +
Sbjct: 1   MNYQFLLETFFVALSGVPIALLVTVVALVIALPLGFLLAL-----TRINKIPVIHHLAKI 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S      +   + I         K +  +++              +I  +  + A + 
Sbjct: 56  YVSFVRGTPIIIQIFIIYSSIPLMLKIIFEKYHIAYDIYKINPIWYAFIVFAFSSTAILI 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS L  + +GQ+EAA ++GL+  +A   +++PQA+   +P + +  +NL+K +SL  
Sbjct: 116 EVFRSALSTIEKGQLEAAHSVGLSTFQAYTRIIIPQALVVALPNICTATVNLIKATSLGY 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   ++        N     +E  L    +YL L   +     R    ++  +
Sbjct: 176 AMSLPEITLKAKVAANVGYNYVEAYLDIFIVYLILCSTVEYLFKRYEKYLSKYK 229



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 43/104 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G      +    ++ A  +G L+   R++   ++  + ++YV   R  P ++ IF 
Sbjct: 12  VALSGVPIALLVTVVALVIALPLGFLLALTRINKIPVIHHLAKIYVSFVRGTPIIIQIFI 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +Y S+  +L I      + + ++  N       +   ++  I +
Sbjct: 72  IYSSIPLMLKIIFEKYHIAYDIYKINPIWYAFIVFAFSSTAILI 115


>gi|134278113|ref|ZP_01764827.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           pseudomallei 305]
 gi|134249897|gb|EBA49977.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           pseudomallei 305]
          Length = 255

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/126 (35%), Positives = 75/126 (59%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A++    A+  EIVR+G+ ++PRGQ++AA+ALGL  R+  R V+LPQA+ ++ 
Sbjct: 89  EMQAAVLAMTVNLGAYALEIVRAGIDSIPRGQIQAAMALGLQGRQVFRYVVLPQALANVF 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L  Q L ++  S++   +   DL      I ++  ++ E  +I   IYL LSI++ L 
Sbjct: 149 PALLGQVLIVMLGSAVVSQISVPDLTYAANFIQSRNFRSFESYVIITAIYLLLSIVLRLL 208

Query: 385 MNRLNA 390
           +NRL  
Sbjct: 209 INRLGK 214


>gi|296394030|ref|YP_003658914.1| polar amino acid ABC transporter inner membrane protein
           [Segniliparus rotundus DSM 44985]
 gi|296181177|gb|ADG98083.1| polar amino acid ABC transporter, inner membrane subunit
           [Segniliparus rotundus DSM 44985]
          Length = 279

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 11/177 (6%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + L ++Y+  F   GLP L++I L   L F  P L        +           AL 
Sbjct: 106 PLRILAIVYVDLF--RGLPVLLVIFL---LGFGAPALRLKGLPKEAVFW-----GAAALV 155

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              +A++AE++R+G+ +VPR Q  AA ALGL      R V+LPQA+R++ P L +  ++L
Sbjct: 156 LTYSAYVAEVLRAGIESVPRTQRLAARALGLRAGATMRFVVLPQAVRAVSPALLNDLVSL 215

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            K+S L   +G  D +     I   T       ++   ++++L+I +A   +    +
Sbjct: 216 QKDSGLIAVLGVVDAIRAAQ-IQTATDFNFTPYVVAGALFVTLTIPLARLTDWHAER 271


>gi|296156736|ref|ZP_06839574.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893335|gb|EFG73115.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 226

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 10/208 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A     S    ++       L        G    L+ +   LI G P L+ + + Y +  
Sbjct: 23  ALTLAASACAFVIGLALGVVLLLARMSPFGPLRALVVLWVSLIRGTPALIHMLIAYYM-- 80

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L   +            +   AL+C T+A+I EI+R  L  +  GQ  A  ALG+ 
Sbjct: 81  -VPALLNISI-------SPVTAGIAALACNTSAYIVEILRGSLGTISWGQRAAGYALGMR 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R VLLPQ +   IPPLTS++  LLK SSL   +   +L +V      QT   +++
Sbjct: 133 TAQVWRHVLLPQMIYRAIPPLTSEFTLLLKASSLMSIIAVPELATVARNATLQTDLPLQV 192

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             I   +Y  +   I+        +++ 
Sbjct: 193 FTITAAVYFLILFCISAVSRVCERRVSR 220


>gi|239816392|ref|YP_002945302.1| polar amino acid ABC transporter inner membrane subunit [Variovorax
           paradoxus S110]
 gi|239802969|gb|ACS20036.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 223

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 100/229 (43%), Gaps = 14/229 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                    ++ + + +LG+V+++F     +       + +   
Sbjct: 1   MNYQFQFDAVFAAWPLLLKGTWITIQLSLVATLLGLVVAIF-CAWGKTSGPGWLRFVVNA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   +I   P LV +               F             +  +A+     A+  
Sbjct: 60  YIE--VIRNTPFLVQLF-----------FFFFALPAIGLRWSPQTAALVAMVVNLGAYAT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ ++P+GQ+EA  AL L   +  R V++  A+++I P LTSQ++ L+ +S++  
Sbjct: 107 EIIRAGIESIPKGQIEAGRALNLKPWEIFRFVIIKPALKAIYPALTSQFILLMLSSAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            +   DL SV   + +QT ++ EI ++   IYL+L++  +     +  +
Sbjct: 167 VISADDLTSVAANLQSQTFRSFEIYIVVAAIYLALALAFSAMFKLIYKR 215



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 35/77 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +  +    +L G   T  L+    +   ++      G+ S    + ++   Y+EV RN
Sbjct: 7   FDAVFAAWPLLLKGTWITIQLSLVATLLGLVVAIFCAWGKTSGPGWLRFVVNAYIEVIRN 66

Query: 139 IPPLVVIFFLYKSVLSV 155
            P LV +FF + ++ ++
Sbjct: 67  TPFLVQLFFFFFALPAI 83


>gi|170738479|ref|YP_001767134.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168192753|gb|ACA14700.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 285

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 9/223 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           + +  L +   A     S +  ++ +     L      +T     + +++T +    P L
Sbjct: 67  IKWAPLLLTGFAFNIAISLLAMLLGTAAGLWLGLALLAETRALRGVAWLATQVFRNAPWL 126

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+     L     V  Q    G     P+++      +    A +AEIVR  + ++P  
Sbjct: 127 VLLFFVMFL-----VPFQVTVFGLRIPLPDWVKATGGFALPVMANVAEIVRGAVRSIPTT 181

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-LVSVGG 354
           Q EAA AL  T R+    ++LPQ ++ ++PP  + Y  +   +  A  VG ++ L     
Sbjct: 182 QWEAAEALAFTRRQTMWRIILPQCLKRMLPPWMNLYALVAMATVQASIVGVSEMLTLTAQ 241

Query: 355 TIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               + G+      +    +  +      I  +  RL  +  +
Sbjct: 242 VHAAEGGRPELFAPLYGFALICFFLYCYPIDRWTARLERRFHV 284


>gi|320184060|gb|EFW58880.1| Glutamate Aspartate transport system permease protein GltJ
           [Shigella flexneri CDC 796-83]
 gi|332098840|gb|EGJ03797.1| general L-amino acid transport system permease protein aapQ domain
           protein [Shigella boydii 3594-74]
          Length = 117

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 49/102 (48%)

Query: 21  DMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYT 80
           +  V     QI+  + +  I  W  +N   N+    ++ G  FL   AGF I Q ++ Y 
Sbjct: 16  NPTVRAWLFQILAVVAVVGIVGWLFHNTVTNLSNRGITSGFAFLDRGAGFGIVQHLIDYQ 75

Query: 81  SDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
              +Y    +VG +NT  ++   ++ A+++G  +G  RLS N
Sbjct: 76  QGDTYGRVFIVGLLNTLLVSALCIVFASVLGFFIGLTRLSDN 117


>gi|218671754|ref|ZP_03521423.1| octopine ABC transporter, permease protein [Rhizobium etli GR56]
          Length = 193

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 3/150 (2%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           + G+ +   Y+  F+  G P LV + L Y          Q   + G    P +    +AL
Sbjct: 47  EIGRTITRAYV--FVFRGSPLLVQMFLIYYGLGQFRHGLQDLGVWGFFREP-YWCAVLAL 103

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  TAA+ +EI R GL+AV   ++EAA A G++     R ++LP A+R  +P   ++ + 
Sbjct: 104 TLNTAAYCSEIFRGGLLAVSAQEIEAARACGMSGILLFRRIILPIAIRHALPAYGNEIIL 163

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           ++K ++LA  +   ++  + G +I  + +A
Sbjct: 164 MIKATALASVITIMEVTGLAGKLIADSFRA 193


>gi|126641537|ref|YP_001084521.1| glutamate/aspartate transport protein [Acinetobacter baumannii ATCC
           17978]
          Length = 231

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 105/221 (47%), Gaps = 10/221 (4%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSR------HFHEKTGKALPLLYISTFLIFGLP 233
              + T    F+ +F+LG +L +  T  ++      + + +  + +PL+    F  F  P
Sbjct: 7   FTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFP 66

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
                 L   L      +    +          +    AL  YTAA ++E VR+G+  V 
Sbjct: 67  E----FLPDSLSAGSGDVVAGGWWKNILNQQPAVIGVFALGLYTAARVSEHVRAGINTVS 122

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ  AA A+G T  ++ R V+LP A R++ P +TS+ +N+ KNS++  A+   +  +  
Sbjct: 123 RGQKFAASAMGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYT 182

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            T+  +T Q I I+++   +YL ++  I   M  +  ++A+
Sbjct: 183 KTMREETSQDIIILILSTPVYLIITYTIKFIMAWIEKRMAV 223



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 3/106 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G     W A    + A ++G+L+G  R   NK +A+I   YVE+FRNIP +V +FF 
Sbjct: 2   LGSGVFTMVWTAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFW 61

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
                  LP    +     G  +                 +F    
Sbjct: 62  AFVFPEFLPDSLSAGS---GDVVAGGWWKNILNQQPAVIGVFALGL 104


>gi|119025522|ref|YP_909367.1| permease of ABC transporter system for amino acids [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154486960|ref|ZP_02028367.1| hypothetical protein BIFADO_00797 [Bifidobacterium adolescentis
           L2-32]
 gi|118765106|dbj|BAF39285.1| permease of ABC transporter system for amino acids [Bifidobacterium
           adolescentis ATCC 15703]
 gi|154084823|gb|EDN83868.1| hypothetical protein BIFADO_00797 [Bifidobacterium adolescentis
           L2-32]
          Length = 224

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 87/221 (39%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+         S  +G+++                + L  +Y+    I     L
Sbjct: 17  LQGLWVTVWIAGVSVALSVPVGLIVGWLM-----TMKNPVVRVLTRIYLDFIRIMPQLAL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + IA      F +      +  G         +       +  A + ++VR  L ++P+ 
Sbjct: 72  LFIAFY---GFAQAWNWNLDATG---------ACVFVFVLWGGAELGDLVRGALESIPKA 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E++  LGL+  +    V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  
Sbjct: 120 QYESSYVLGLSGWQTFTKVILPQALRRLLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQ 179

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           II+            I     F+Y  +   +++   RL  +
Sbjct: 180 IIDANRFQYPTGTLWIYGTIFFMYFIVCWPLSIVARRLEKR 220



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W+A   +  +  +G +VG      N +V  + R+Y++  R +P L ++F  
Sbjct: 16  LLQGLWVTVWIAGVSVALSVPVGLIVGWLMTMKNPVVRVLTRIYLDFIRIMPQLALLFIA 75

Query: 149 YKSVLSVLPI 158
           +         
Sbjct: 76  FYGFAQAWNW 85


>gi|258654114|ref|YP_003203270.1| polar amino acid ABC transporter inner membrane subunit
           [Nakamurella multipartita DSM 44233]
 gi|258557339|gb|ACV80281.1| polar amino acid ABC transporter, inner membrane subunit
           [Nakamurella multipartita DSM 44233]
          Length = 233

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 9/238 (3%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L    +T+       + SF+LG++L+       R       ++    
Sbjct: 1   MDFSFLTDPRYDILGAFWMTVQLTFWSAIGSFILGVILAAM-----RVSPVPLMRSFAGG 55

Query: 223 YISTFLIFGLPTLVLIA---LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           +++      L  ++++    +  QL     V            S  F    +    YT+ 
Sbjct: 56  FVNVVRNIPLTLIIIMMSQVVANQLGLRLAVREAGVNPQAFLNSQNFRLAVLGFIIYTST 115

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+ E +RSG+  VP GQ EAA A+GL   +   +V+LPQA+R++I PL S  + L KN++
Sbjct: 116 FVCEAIRSGINTVPPGQAEAARAIGLKFTQVLGIVVLPQAIRAVIAPLGSVLIALTKNTT 175

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIE-IILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +A A+G A+   +  T++         + L+    ++ L++   L    +  K  +K 
Sbjct: 176 VASAIGVAEAALLMNTLLENEADKFTAVFLVIAAGFIVLTLPTGLIFGAVANKYQVKR 233



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 33/66 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL  F  T  L F   I + I+G ++ A R+S   L+      +V V RNIP  ++I  +
Sbjct: 13  ILGAFWMTVQLTFWSAIGSFILGVILAAMRVSPVPLMRSFAGGFVNVVRNIPLTLIIIMM 72

Query: 149 YKSVLS 154
            + V +
Sbjct: 73  SQVVAN 78


>gi|17549795|ref|NP_523135.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17432050|emb|CAD18727.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 226

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R    +  + + + ++S   I G P L+ + L Y +    P L   +           
Sbjct: 45  WARLSRYRLLRGMVMAWVSA--IRGTPALIHMLLAYYV---VPPLLGLSI-------SPL 92

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +   AL+C T+A++ EI+R  L +VP  Q  AA ALG+   +  R VLLPQ     IPP
Sbjct: 93  AAGIGALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAIPP 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++  LLK SSL   +   +L +V      Q+   +++  +   +Y  +   I+    
Sbjct: 153 LTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQVFAMTAAVYFVILFCISAAAR 212

Query: 387 RLNAKIAL 394
               +++ 
Sbjct: 213 VCERRVSW 220


>gi|320531680|ref|ZP_08032620.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136100|gb|EFW28108.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 291

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 25/236 (10%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G  + ++ L     T+   A   V +F LGI L        R    +  + L  
Sbjct: 73  EWRYFLGHSVVSQLLEAAGTTLSLGAVAAVLTFPLGIALGWL-----RLLDNRPVRWLVG 127

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L+I       +  LV   L     F                  +F  L + +   T+A  
Sbjct: 128 LWIDAMRAVPMLLLVYFFLLVVPRFAT--------------VSDFWKLALPIVMCTSATT 173

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ RSG+ A+ RGQ EAA ALG++     RL+L PQA+R ++P L +Q + ++K ++LA
Sbjct: 174 AEVFRSGVRALDRGQTEAAWALGMSSSLTMRLILAPQALRLMLPTLVTQLVTIVKGTTLA 233

Query: 342 VAVGFADLVSVGGTII------NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             + + +L+  G TII       +     +  +I   +Y+ ++  +      + ++
Sbjct: 234 YVLAYPELMYRGSTIIGQAKIDARLSVFFQTYVIIGVLYIIVNWSLGALARYIESR 289


>gi|257063102|ref|YP_003142774.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
 gi|256790755|gb|ACV21425.1| amino acid ABC transporter membrane protein [Slackia
           heliotrinireducens DSM 20476]
          Length = 235

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 90/216 (41%), Gaps = 1/216 (0%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+     +     +   + + G+++   A  L R +       +  ++++ +    +   
Sbjct: 12  LASGIQFLPATLALTAIAILTGLLVG-GAMALFRTYRVPVLSQISAVFVTMYSGIPVMVA 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++I     L     V     +         F    +A++     +++E VR  +++V   
Sbjct: 71  LVILNLLYLTQFDNVAAALGWNITVRDVSPFWVAAVAVTLTATVYVSEAVRGSVLSVDTT 130

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ++GLT  +  R +++PQ +   IP L +  +  +K++S+ + VG  +L++    
Sbjct: 131 QYEAAYSVGLTKWQTIRRIVIPQFIPVFIPMLCTNIIGTMKSTSIVMTVGVMELLNGSLL 190

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +    +E  +    +Y ++SI+I         +
Sbjct: 191 PSMKNYSFLEGYIAAALVYWAISILIEAISRYAEKR 226


>gi|227820463|ref|YP_002824434.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339462|gb|ACP23681.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 234

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 14/212 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F   +  +        +    +I + S +LG    +    L+       G    L+
Sbjct: 1   MSYTFQFGVLAQYQDQILSGIWLTIRISLLSIILGCAAGIL---LASVRSVWGGAVRFLV 57

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +I   P LV + + Y           F   G         +  I ++   AA+  
Sbjct: 58  DAYVEIIRNTPFLVQLFIVY-----------FGLPGLGLRVGADTAALIGMTINLAAYST 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A+ + Q+EA  ALG T  +  R V++  A+  + P L SQ++ ++  SS+  
Sbjct: 107 EIIRAGIEAIHKSQIEAGEALGFTRFQIYRHVIIVPAIAKVYPALCSQFVLMMLASSICS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           A+   +L +    I +QT ++ EI +    IY
Sbjct: 167 AISTQELAASAAFIESQTYRSFEIYIAVTLIY 198



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 36/89 (40%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   IL G   T  ++   +I     G L+ + R      V ++   YVE+ RN P LV
Sbjct: 12  QYQDQILSGIWLTIRISLLSIILGCAAGILLASVRSVWGGAVRFLVDAYVEIIRNTPFLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            +F +Y  +  +            GM +N
Sbjct: 72  QLFIVYFGLPGLGLRVGADTAALIGMTIN 100


>gi|115351569|ref|YP_773408.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia ambifaria AMMD]
 gi|115281557|gb|ABI87074.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia ambifaria AMMD]
          Length = 240

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 8/208 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTF 227
                  LT+   A   + + V G++L++         R     +    +  PLL    F
Sbjct: 11  WLWQGFLLTLGLAAASALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQLLF 70

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG+ +L+       L+    +      +  +  S EF++ ++ LS YTAAF+AE   +
Sbjct: 71  WYFGVASLLPDTWITWLNARHEL--SAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEECEA 128

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL  V   Q +AA ALGLT  ++ R V+LPQA+R  +P L  QY+NL+KNSSLA+A+G A
Sbjct: 129 GLRGVRGAQHDAAAALGLTPMQSLRYVVLPQAVRIALPSLFGQYMNLVKNSSLAMAIGVA 188

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYL 375
           +L      +  +T +      +   +Y+
Sbjct: 189 ELSYASRQVETETFKTFAAFGVATVLYV 216



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 62/159 (38%), Gaps = 4/159 (2%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y + +  GF+ T  LA +  + AT+ G L+   R +    V  +   YV  FRN P LV 
Sbjct: 8   YLSWLWQGFLLTLGLAAASALAATVGGLLLAVMRHARGTAVRTVAAGYVVAFRNTPLLVQ 67

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS--- 201
           + F Y  V S+LP    +  L     L+   L+    + +  A     S      ++   
Sbjct: 68  LLFWYFGVASLLPDTWITW-LNARHELSAGPLTLAWPSFEFVAGWVGLSAYTAAFVAEEC 126

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
               R  R        AL L  + +     LP  V IAL
Sbjct: 127 EAGLRGVRGAQHDAAAALGLTPMQSLRYVVLPQAVRIAL 165


>gi|307321920|ref|ZP_07601303.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti AK83]
 gi|306892433|gb|EFN23236.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Sinorhizobium meliloti AK83]
          Length = 204

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 14/207 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I   S V+ I L+ F T ++R    +  + + L+Y+  F   G   LV + + Y  
Sbjct: 1   MTISIAAQSMVVAIGLA-FVTGMARRSSSRIVRRVTLVYVELF--RGTSLLVQLFVLY-- 55

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F         P  ++  + L     A+ +EIVRS +  +  GQ+EAA AL 
Sbjct: 56  ---------FVLPIYGIRLPAEVTAILGLGLNQGAYGSEIVRSAIDNIGTGQIEAARALS 106

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L        ++LPQA+  ++P   +  +  +K ++L   +   +L   G ++I  TGQ  
Sbjct: 107 LPRIITFWKIILPQALIIMLPSFGNLAIETVKATALVSLITIPELTFFGKSLIYSTGQTF 166

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
            +    +  YL+++  + L +     +
Sbjct: 167 LVWASVVIAYLAINTPLNLLVLWAERR 193


>gi|221195848|ref|ZP_03568901.1| ABC transporter, permease protein [Atopobium rimae ATCC 49626]
 gi|221184322|gb|EEE16716.1| ABC transporter, permease protein [Atopobium rimae ATCC 49626]
          Length = 224

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 23/221 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T++        S  LG+ + L  T  S+           +L +   ++  +P L
Sbjct: 17  LGGLWVTVEIGFLSVALSIPLGVFVGLLMTSRSKVIR-------AILRMYLEVVRVMPQL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+   Y + F        N  G       F +     + + AA + ++VR  L ++P  
Sbjct: 70  VLL---YVVFFGTAAWFGANLDG-------FEASVAVFTFWGAAEMGDLVRGALTSIPSS 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q ++A  LGL+ R+    V+LPQA+R ++PP  +    ++K ++L   +G  +L+ VG  
Sbjct: 120 QYDSAFVLGLSRRQTFLRVVLPQAIRRLLPPAINLITRMIKTTALCNLIGVVELIRVGSQ 179

Query: 356 IINQTGQAIE------IILIWMFIYLSLSIMIALFMNRLNA 390
           I +             I     F+Y +    ++L   RL  
Sbjct: 180 ITDFYRFKFPTTGALWIYGAIFFLYFAACFPLSLLARRLER 220



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 67/196 (34%), Gaps = 6/196 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  + F  +  +  +G  VG    S +K++  I R+Y+EV R +P LV+++ +
Sbjct: 16  LLGGLWVTVEIGFLSVALSIPLGVFVGLLMTSRSKVIRAILRMYLEVVRVMPQLVLLYVV 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI----FVFSFVLGIVLSLFA 204
           +    +              +F          L       I    +  +FVLG  LS   
Sbjct: 76  FFGTAAWFGANLDGFEASVAVFTFWGAAEMGDLVRGALTSIPSSQYDSAFVLG--LSRRQ 133

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
           T L     +   + LP        +     L  +    +L      +  F      T   
Sbjct: 134 TFLRVVLPQAIRRLLPPAINLITRMIKTTALCNLIGVVELIRVGSQITDFYRFKFPTTGA 193

Query: 265 EFMSLYIALSCYTAAF 280
            ++   I    + A F
Sbjct: 194 LWIYGAIFFLYFAACF 209


>gi|330879088|gb|EGH13237.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 197

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 11/195 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   +T+   A   V   VLG +L+L      R    K    +   Y++ F      ++
Sbjct: 14  WNGMVMTLKLMAMGVVGGLVLGTLLALM-----RLSSNKLLANVAGAYVNYFR-----SI 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ +    +   P + ++   G  T    F S  +A   + AA+  EIVR+G+ ++ +G
Sbjct: 64  PLLLVITWFYLAVPFVLRW-ITGEDTPIGAFASCVVAFMMFEAAYFCEIVRAGVQSISKG 122

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA ALG+ + +  RL++LPQA R + P L  Q + L +++SL   VG  D ++   +
Sbjct: 123 QMGAAQALGMNYSQMMRLIILPQAFRKMTPLLLQQSIILFQDTSLVYTVGLVDFLNASRS 182

Query: 356 IINQTGQAIEIILIW 370
             +  G+A E ++I 
Sbjct: 183 SGDIIGRANEFLIIA 197



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G V T  L   G++   ++GTL+   RLS+NKL+A +   YV  FR+IP L+VI + 
Sbjct: 13  LWNGMVMTLKLMAMGVVGGLVLGTLLALMRLSSNKLLANVAGAYVNYFRSIPLLLVITWF 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y +V  VL                               
Sbjct: 73  YLAVPFVLRWITGEDTPIGAFASCVVAFMMFEAAYFCEI 111


>gi|212716830|ref|ZP_03324958.1| hypothetical protein BIFCAT_01773 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660115|gb|EEB20690.1| hypothetical protein BIFCAT_01773 [Bifidobacterium catenulatum DSM
           16992]
          Length = 224

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+         S ++G+V+                + L  +Y+    I     L
Sbjct: 17  LQGLWVTVWIAGVSVGLSVLVGLVVGWLM-----TMKNPVIRVLTRIYLDFIRIMPQLAL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + IA      F +      +  G         +       +  A + ++VR  L ++P+ 
Sbjct: 72  LFIAFY---GFARAWNWNLDATG---------ACVFVFVLWGGAELGDLVRGALESIPKA 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGL+  +    V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  
Sbjct: 120 QYESAYVLGLSGWQTFVKVILPQALRRLLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQ 179

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+            I  +  F+Y  +   +++   RL  + +
Sbjct: 180 IIDANRFQYPTGTLWIYGVIFFMYFIVCWPLSIVARRLEKRWS 222



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W+A   +  + ++G +VG      N ++  + R+Y++  R +P L ++F  
Sbjct: 16  LLQGLWVTVWIAGVSVGLSVLVGLVVGWLMTMKNPVIRVLTRIYLDFIRIMPQLALLFIA 75

Query: 149 YKSVLSVLPI 158
           +         
Sbjct: 76  FYGFARAWNW 85


>gi|225631073|ref|ZP_03787808.1| amino acid (glutamine) ABC transporter, permease [Wolbachia
           endosymbiont of Muscidifurax uniraptor]
 gi|225591231|gb|EEH12378.1| amino acid (glutamine) ABC transporter, permease [Wolbachia
           endosymbiont of Muscidifurax uniraptor]
          Length = 215

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 10/173 (5%)

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
           +PL+     +I G P ++ +++ Y   F  P +         T    F +  IA    + 
Sbjct: 46  IPLINGIISVIRGTPLILQLSVVY---FMTPTIAG-------TKLNIFSAGIIAFGLNSC 95

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+IAEI+R+G+  + + Q EAA  L +      R ++LPQ +++I+P + ++ + LL  +
Sbjct: 96  AYIAEILRAGIETISKNQFEAAKTLQIPSFYMWRDIILPQVIKNILPAMINEIIALLIET 155

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L   +G  D++     +  +       + +    Y +L ++I     ++  K
Sbjct: 156 ALISTIGGVDIMRSAQMLAAEQFTYFIPLCLAGAYYYALVLLIVYIGKKIEQK 208


>gi|166032312|ref|ZP_02235141.1| hypothetical protein DORFOR_02015 [Dorea formicigenerans ATCC
           27755]
 gi|166028035|gb|EDR46792.1| hypothetical protein DORFOR_02015 [Dorea formicigenerans ATCC
           27755]
          Length = 224

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 96/224 (42%), Gaps = 22/224 (9%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R L+   + +  +    V S  LGIVL +        +     KA+  +Y+    I   
Sbjct: 16  MRMLAGLGVALKISLISVVISIPLGIVLGVLM-----TWKNPITKAILRIYLEIVRIMP- 69

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                + L + + F       ++  G +       +  I  + + AA ++++VR  LI++
Sbjct: 70  ----QMVLLFLVFFGTTRAFGWDLSGEN-------ASIIVFTFWGAAEMSDLVRGALISI 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q E++ ALGL+  +    +++PQ +R +IP   +    ++K +SL + +G  +++ V
Sbjct: 119 PKHQYESSEALGLSKVQTYWYIIIPQTLRRLIPLSINLITRMIKTTSLILMIGVVEVLKV 178

Query: 353 GGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              II          A  I L+   +Y      I++    L  +
Sbjct: 179 SQQIIEANRMSSPNAAFGIYLVVFLLYFFACWPISMLAKYLERR 222


>gi|254500334|ref|ZP_05112485.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222436405|gb|EEE43084.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 226

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 13/220 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F ++ N   L         +A + V    LG VL+   + L RH+       +  +Y+ 
Sbjct: 6   FFEIYRNPEYLLLLGEGAAVSAFLTVIGGALGFVLATNLSAL-RHYKVPILAPIATIYVE 64

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I   P +V +   + + F  P+L  +         P +    +ALS   +A+ AEI+
Sbjct: 65  F--IRNTPLIVQM---FFVAFGLPLLLGY-------QWPFWAHALLALSLNFSAYFAEIL 112

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL  +  GQ EAA ALGL        +L PQA+ ++ P L SQ++ L   + +   +G
Sbjct: 113 RAGLAGIGTGQSEAAAALGLPTWLGFSKILFPQAVAAMFPSLNSQFIFLFLTTGVISEIG 172

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
             DL   G  I +++ ++ E+      IY+ +++     +
Sbjct: 173 VTDLTWAGLYIDSRSFRSFEVFFTLTVIYVLMALSFKALL 212



 Score = 38.0 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 33/79 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G   + +L   G     ++ T + A R     ++A I  +YVE  RN P +V 
Sbjct: 15  YLLLLGEGAAVSAFLTVIGGALGFVLATNLSALRHYKVPILAPIATIYVEFIRNTPLIVQ 74

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           +FF+   +  +L       
Sbjct: 75  MFFVAFGLPLLLGYQWPFW 93


>gi|91777480|ref|YP_552688.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91690140|gb|ABE33338.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 227

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 14/217 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L           ++ +      +V    A  + +       +    LYIS   + G P
Sbjct: 9   HSLPTLIDGWLLTVELTLLGATGSLVFGHLALAM-QLTRIAPLRWAARLYISF--MRGTP 65

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV +   + L F  P++G              ++  + L   + A+ AEI+R  L  + 
Sbjct: 66  ALVQL---FVLFFALPLIGLGGR--------PMLAAALTLGLNSGAYTAEILRGNLRVIT 114

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAAIALG+   +    + +PQ +++ +P L +++  LLK + LA  V   +L   G
Sbjct: 115 PGQYEAAIALGMAPSRIALRIAMPQMLKASLPALINEFTILLKTTPLASVVAVTELTYAG 174

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +I +T  + +++L+    YL++++ +     R   
Sbjct: 175 QMVIARTYTSAQVMLLVSVGYLAVALPVIYAARRAQR 211



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 3/123 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G++ T  L   G   + + G L  A +L+    + W  R+Y+   R  P LV +F L
Sbjct: 14  LIDGWLLTVELTLLGATGSLVFGHLALAMQLTRIAPLRWAARLYISFMRGTPALVQLFVL 73

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI---FVFSFVLGIVLSLFAT 205
           + ++  +       +     + LN+   +   L  +        +  +  LG+  S  A 
Sbjct: 74  FFALPLIGLGGRPMLAAALTLGLNSGAYTAEILRGNLRVITPGQYEAAIALGMAPSRIAL 133

Query: 206 RLS 208
           R++
Sbjct: 134 RIA 136


>gi|239982700|ref|ZP_04705224.1| glutamate transporter permease [Streptomyces albus J1074]
          Length = 297

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/255 (21%), Positives = 108/255 (42%), Gaps = 18/255 (7%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           V + +                           L     T+   A   + +  LG V  + 
Sbjct: 32  VWWLVSALGDKGHLEWAKWKPFTESSSWTVYLLPGLGNTLKAAALSMIIALPLGAVFGIA 91

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
             RLS H   +      + +        +P L+L+    +L+                  
Sbjct: 92  --RLSDHAWVRIPAGTVVEF-----FRAIPVLILMVFANELYSGS----------VEPDV 134

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
               ++   L  Y A+ +AEIVR+G++++P GQ EA  A+GL   +  R +LLPQA+ ++
Sbjct: 135 RPLYAVVTGLVLYNASVLAEIVRAGILSLPSGQAEAGRAIGLRKSQTMRFILLPQAVTAM 194

Query: 324 IPPLTSQYLNLLKNSSL-AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +P + SQ + ++K+++L    +GF +L+   GT+    G  I   ++   I++ L++++ 
Sbjct: 195 LPAIVSQLVVIVKDTALGGAMIGFTELLRSRGTMSAFYGNTIPSFIVVAVIFVVLNLILT 254

Query: 383 LFMNRLNAKIALKEK 397
            F + L   +  ++K
Sbjct: 255 TFASWLEKWLRSRKK 269



 Score = 70.7 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 22/142 (15%)

Query: 16  MKFLYDM-----RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGF 70
              LYD      +  N+ V ++ A+ L     W V+                 L ++   
Sbjct: 2   SSVLYDTPGPRAKARNLIVSVVFAVALAAGVWWLVSA----------------LGDKGHL 45

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           E  +   P+T  SS+   +L G  NT   A   MI A  +G + G  RLS +  V     
Sbjct: 46  EWAK-WKPFTESSSWTVYLLPGLGNTLKAAALSMIIALPLGAVFGIARLSDHAWVRIPAG 104

Query: 131 VYVEVFRNIPPLVVIFFLYKSV 152
             VE FR IP L+++ F  +  
Sbjct: 105 TVVEFFRAIPVLILMVFANELY 126


>gi|227818417|ref|YP_002822388.1| ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337416|gb|ACP21635.1| putative permease component of ABC transporter [Sinorhizobium
           fredii NGR234]
          Length = 234

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 16/199 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            I   +F   + ++L   RLS+           L +  T L++    + L+ L    +F 
Sbjct: 36  SILAIAFAFPVSIALALARLSKSPF--------LNWPVTALVYFTRGVPLLMLILWGYFL 87

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P+    N        P F+++ + L  Y  AF++E+VR G++A+  GQMEA+ ALG ++
Sbjct: 88  VPLATGANV-------PSFLTMLVTLVVYQGAFLSEVVRGGIVALGHGQMEASRALGHSY 140

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEI 366
             A R V+LPQA+ ++IP + S ++  +K+++L   +   DL      I NQ   Q  ++
Sbjct: 141 LGAMRYVILPQALYNVIPSIISVFVATIKDTTLGYVINVPDLTFAASQINNQLLTQPFQV 200

Query: 367 ILIWMFIYLSLSIMIALFM 385
             I   +Y  +   ++   
Sbjct: 201 FFILAAVYYVICWSLSRVA 219


>gi|299069940|emb|CBJ41224.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           CMR15]
          Length = 226

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R    +  + + + ++S   I G P L+ + L Y +    P L   +           
Sbjct: 45  WARLSRYRLLRGMVMAWVSA--IRGTPALIHMLLAYYV---VPPLLGLSI-------SPL 92

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +   AL+C T+A++ EI+R  L +VP  Q  AA ALG+  ++  R VLLPQ     IPP
Sbjct: 93  AAGIGALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREQQVWRHVLLPQVFYRAIPP 152

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++  LLK SSL   +   +L +V      Q+   +++  +   +Y  +   I+    
Sbjct: 153 LTSEFTILLKTSSLMSIIAVPELATVARNASLQSDLPLQVFAMTAAVYFVILFCISAAAK 212

Query: 387 RLNAKIAL 394
               +++ 
Sbjct: 213 VCERRVSW 220


>gi|300698250|ref|YP_003748911.1| amino-acid ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
 gi|299074974|emb|CBJ54543.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           CFBP2957]
          Length = 223

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A +      LG +    A   +     +    L   Y++         LV ++     
Sbjct: 21  VTAIVSAIGIPLGALAGTLA-AYAVQSRSRVLAGLARGYVAMVRNVPYLILVYLSF---- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F        +          + YT  +  EI+R+ L +VPRGQ  AA +LG
Sbjct: 76  ---------FGLPKLGVPASAMAVAIGCTALYTGGYFCEILRAALQSVPRGQSGAAQSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R ++ PQ +  +IPP T   + + K+S++   +   ++      +   T    
Sbjct: 127 MSRWQVQRYIVAPQLLGFLIPPTTGLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYT 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI+     IY + S+++A     L   +A + 
Sbjct: 187 EILAATAAIYWASSVLLAAAGRSLE-HLARRR 217



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 36/80 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++  G+    + GTL      S ++++A + R YV + RN+P L++++ 
Sbjct: 14  VLLRGLEVTAIVSAIGIPLGALAGTLAAYAVQSRSRVLAGLARGYVAMVRNVPYLILVYL 73

Query: 148 LYKSVLSVLPIPDHSIVLPF 167
            +  +  +        V   
Sbjct: 74  SFFGLPKLGVPASAMAVAIG 93


>gi|116617289|ref|YP_817660.1| ABC-type amino acid transport permease component [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096136|gb|ABJ61287.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 240

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 12/237 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F + +    L +  +T+       +FS +LG +++  + +LSR    +T      
Sbjct: 3   PFSFKFFLSVFGEVLPYFPVTLLIIVTSIIFSSLLGALVA--SGQLSRSPIWRTLSQ--- 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                F++   P +VL+ L +   +  P L   +         + + + IALS   A+ +
Sbjct: 58  --GYVFVLRSTPPIVLLFLVF---YGLPKLLLLSLNININDWQKSIFVIIALSLLFASNL 112

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ +S  ++V  GQ EAA+ +GL+  +    + LPQ +   +P   +    L+K+++LA
Sbjct: 113 AEVFKSAYLSVNTGQREAALMVGLSEWQTFYRITLPQTIVVALPNFANTVAALIKDAALA 172

Query: 342 VAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G  D++  G  +I++     ++E  L    IY  L ++I      L   +    
Sbjct: 173 YVIGLLDMMGAGDNLISRNFGHHSLETYLALAIIYWILFVIIEQGAKYLERYLGKSR 229



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 35/56 (62%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           T  +  + +I ++++G LV +G+LS + +   + + YV V R+ PP+V++F ++  
Sbjct: 23  TLLIIVTSIIFSSLLGALVASGQLSRSPIWRTLSQGYVFVLRSTPPIVLLFLVFYG 78


>gi|319946731|ref|ZP_08020965.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus australis ATCC 700641]
 gi|319746779|gb|EFV99038.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus australis ATCC 700641]
          Length = 226

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 18/219 (8%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                 LT        + SF+LG+++S+      RH+       L   YI   L    P 
Sbjct: 13  YQQAFFLTFHIAVWGILGSFLLGLIVSII-----RHYRIPILSQLAGCYIE--LSRNTPL 65

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ +   Y           F       V    +   I L     +++AE  RSGL AV +
Sbjct: 66  LIQLFFLY-----------FGLPRIGIVLSSEVCATIGLIFLGGSYMAESFRSGLEAVSQ 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q E  +++GLT R+  R V+LPQA    +P  ++  + L+K +S+   V  ADL+ V  
Sbjct: 115 TQHEIGLSIGLTPRQVFRYVILPQATAVALPSFSANVIFLIKETSVFSVVALADLMYVAK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +I    +    + + +  YL L + I+L  + +  ++ 
Sbjct: 175 DLIGLYYETDIALTMLVIAYLLLLLPISLLFSWIERRLR 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 45/111 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  TF +A  G++ + ++G +V   R     +++ +   Y+E+ 
Sbjct: 1   MDWSIVEQYFPLYQQAFFLTFHIAVWGILGSFLLGLIVSIIRHYRIPILSQLAGCYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           RN P L+ +FFLY  +  +  +    +    G+          +      A
Sbjct: 61  RNTPLLIQLFFLYFGLPRIGIVLSSEVCATIGLIFLGGSYMAESFRSGLEA 111


>gi|193077066|gb|ABO11824.2| ABC-type amino acid transport system [Acinetobacter baumannii ATCC
           17978]
          Length = 231

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 101/234 (43%), Gaps = 27/234 (11%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRH--FHEKTG 216
            +   +        +  L+   +++ +     +   +  I+++     L+R   F+ +  
Sbjct: 1   MNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYRVRVLNRIAQFYIELS 60

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           +  PLL    FL +GLP L                              F    I L+  
Sbjct: 61  RNTPLLIQLFFLYYGLPKL------------------------GIKIDGFACGVIGLTFL 96

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L+K
Sbjct: 97  GGSYMAEAFRAGLQSVAKGQIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGANCLFLIK 156

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            SS+  A+   +L+ V   +I    +  E + + +  YL + ++  ++ N+L+ 
Sbjct: 157 ESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLII-LLTRVYFNQLSR 209


>gi|313667602|ref|YP_004047886.1| ABC transporter [Neisseria lactamica ST-640]
 gi|313005064|emb|CBN86496.1| putative ABC transporter [Neisseria lactamica 020-06]
          Length = 222

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             +I  F +  +  + ++   + 
Sbjct: 24  QISLISVAASCVLGTLFGLVLRSRNRLVR----------FIGRFYLETIRIVPILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIGG-------FWVCVWVFTLWGVAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+ R+  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRRQVFRYIELPQSVRRVLPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFLCCWPLSLLAAKLEQK 219



 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 38/82 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV +I R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRFIGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIGGFWVCVWVFTLW 99


>gi|238792192|ref|ZP_04635827.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           intermedia ATCC 29909]
 gi|238728429|gb|EEQ19948.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           intermedia ATCC 29909]
          Length = 235

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 2/208 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S V G++L+L    + + F  +            F    L   L+LI     
Sbjct: 21  MTAKLFLLSVVPGLLLALL-MAVGQAFGPRPLSWFIRSITYFFRSTPLYLQLMLIYYGLS 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   ++  PR +  A  A 
Sbjct: 80  QFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVAGEAF 139

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V  ++   T   
Sbjct: 140 GMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARSLYAATYSP 199

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
               L+   +YL  + M+    +R   +
Sbjct: 200 FIPFLMAAALYLLCTFMLIYLFSRAERR 227



 Score = 37.2 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 2/148 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    ++P  ++  L+  G+    + ++W  R     FR+ P  + +  +Y
Sbjct: 16  VTGLAMTAKLFLLSVVPGLLLALLMAVGQAFGPRPLSWFIRSITYFFRSTPLYLQLMLIY 75

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +     +            L        TL +  N   +V   + G++++        
Sbjct: 76  YGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVA 135

Query: 210 --HFHEKTGKALPLLYISTFLIFGLPTL 235
              F     + +  L +   L  G+P L
Sbjct: 136 GEAFGMSQWQIIRRLVLPATLRRGIPAL 163


>gi|296313422|ref|ZP_06863363.1| amino acid ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
 gi|296840054|gb|EFH23992.1| amino acid ABC transporter, permease protein [Neisseria
           polysaccharea ATCC 43768]
          Length = 222

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 89/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             +I  F +  +  + ++   + 
Sbjct: 24  QISLISVAASCVLGTLFGLVLRSRNRLVR----------FIGRFYLETIRIVPILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIGG-------FWVCVWVFTLWGVAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+ R+  R + LPQ++R  +P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRRQVFRYIELPQSVRRALPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFLCCWPLSLLAAKLEQK 219



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 38/82 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV +I R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRFIGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIGGFWVCVWVFTLW 99


>gi|309379287|emb|CBX22060.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 222

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 90/213 (42%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             +I  F +  +  + ++   + 
Sbjct: 24  QISLISVAASCVLGTLFGLVLRSRNRLVR----------FIGRFYLETIRIVPILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIGG-------FWVCVWVFTLWGIAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+ R+  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRRQVFRYIELPQSVRRVLPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFLCCWPLSLLAAKLEQK 219



 Score = 43.4 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 38/82 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV +I R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRFIGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIGGFWVCVWVFTLW 99


>gi|260467393|ref|ZP_05813565.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
 gi|259028853|gb|EEW30157.1| polar amino acid ABC transporter, inner membrane subunit
           [Mesorhizobium opportunistum WSM2075]
          Length = 237

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 86/227 (37%), Gaps = 14/227 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           P+ +             +   A++  +  +  +  +L    +++       + L    I 
Sbjct: 15  PWCLVSMLDIWLGIMQGVGITAEVTAYGLIFAVPFALVFG-VAQFLTTGMTRFLVTAVIE 73

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            +    +  L+     +  ++  PV+                   + L   T  + ++ V
Sbjct: 74  FWRSSAVVILL-----FFFYYVLPVM--------GVALSALTVSALVLGLNTGGYASQAV 120

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+GL ++P GQ EA +ALGL+      L+ LPQA+ ++ P   +  + L+K +SL   V 
Sbjct: 121 RAGLQSLPAGQREAGMALGLSRPAILLLIELPQALVAMSPTFVNNLIQLVKATSLVSLVT 180

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             D+      I       + I    +  +  +   IAL    L A++
Sbjct: 181 LTDMTFRAKEIAQTNYDPVAIYSALLLAFFVVCYPIALAGRWLEARV 227


>gi|39938564|ref|NP_950330.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39721673|dbj|BAD04163.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 601

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 6/207 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 +  F+L IVL+      S   + +T     +  I +FL   L  ++ I     +
Sbjct: 395 LALDGVIVGFILAIVLTWIK---SIKPNYQTQNPFIVGLIQSFLYL-LDAILYIFKSIPV 450

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                ++  F +   +       S  I L   +A  I  I+   +  + +GQ+EA++ALG
Sbjct: 451 ATQMIIVH-FGWRAYNPELNPMYSGIIVLLLNSAVSITNILLQNIKFLDKGQVEASLALG 509

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTGQA 363
           +T R+    V+ PQ ++  +P +  Q++  +K+S+     VG  D+     T I QTG  
Sbjct: 510 MTQRQTFFCVIFPQTLKRSLPFVVQQFIVNIKDSACFGGLVGLLDVAWKAKTQIVQTGSI 569

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
                I   IYL L  +  LF+  L  
Sbjct: 570 AIPYAITACIYLVLITIANLFVKYLEK 596


>gi|302186713|ref|ZP_07263386.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae 642]
          Length = 217

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   Y L F  P+             P   +  I L CY AA+IAE  R+ +  +P GQ
Sbjct: 68  LMVQLYVLFFALPL--------AGITFPAITTGVIGLGCYYAAYIAEAYRAAIDDIPAGQ 119

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA AL        R ++LPQA++ ++P L +  + + K + L   +   +L      I
Sbjct: 120 WEAARALDFNRGDTWRRIILPQALKPMLPVLGNYLIGMFKETPLLAVITIPELFQAAKQI 179

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              T +  E   +   ++L++S+  +L    L  +
Sbjct: 180 AGMTYRYNEPYTVMALMFLAISVPTSLLFKYLERR 214


>gi|90577482|ref|ZP_01233293.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
 gi|90440568|gb|EAS65748.1| putative amino acid ABC transporter, permease protein [Vibrio
           angustum S14]
          Length = 311

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 4/210 (1%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
            F         +L     A IF     L    SL   RL  + + +  + +P L      
Sbjct: 78  FFQGVFSTIRISLWGMLFAAIFGLLLALARRSSLLFLRLPANAYIQLVRNIPPLVFVFIF 137

Query: 229 IFGLPTLVLIALK----YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            F + + ++  L     ++ +  +    Q    G S +     S  + +    AA+IAE+
Sbjct: 138 YFFISSQLVPLLGLNDLFRFYNGQENAFQSFLFGSSQLWENLFSGILCVGLIAAAYIAEV 197

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+GL ++  GQ EAA +LGL+     R V+ PQA+  I+P L  Q+++++K+SS+   +
Sbjct: 198 IRAGLDSIDNGQWEAADSLGLSKFDRFRFVIFPQAIAGIVPALAGQFISIVKDSSIISLI 257

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIY 374
              ++  VG  + N +G   EI L+   +Y
Sbjct: 258 SIQEITFVGSEMANSSGLIFEIWLLVGAVY 287



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 9/157 (5%)

Query: 62  GFLSERAGFEIDQGI-------VPYTSDSSY-ATAILVGFVNTFWLAFSGMIPATIIGTL 113
           G+L  R+   I           + ++S  S        G  +T  ++  GM+ A I G L
Sbjct: 43  GWLYYRSSIGIHYHWQWQKAFDLVFSSSQSNEIPYFFQGVFSTIRISLWGMLFAAIFGLL 102

Query: 114 VGAGRLSANKLVAWICRVYVEVFRNIPPL-VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           +   R S+   +      Y+++ RNIPPL  V  F +     ++P+   + +  F     
Sbjct: 103 LALARRSSLLFLRLPANAYIQLVRNIPPLVFVFIFYFFISSQLVPLLGLNDLFRFYNGQE 162

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
           N   SF   +      +F     +G++ + +   + R
Sbjct: 163 NAFQSFLFGSSQLWENLFSGILCVGLIAAAYIAEVIR 199


>gi|322373494|ref|ZP_08048030.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
 gi|321278536|gb|EFX55605.1| amino acid ABC transporter, permease protein [Streptococcus sp.
           C150]
          Length = 225

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K  + L  +Y+    I        + L + ++F        N  G        +S  
Sbjct: 49  SKSKIIRFLSRIYLEFIRIMP-----QLVLLFIVYFGLARNFNINISGE-------LSAI 96

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + +  A + ++VR  + ++PR Q E+  ALGLT+ +    V++PQ +R ++P   + 
Sbjct: 97  IVFTLWGTAEMGDLVRGSITSLPRHQFESGRALGLTNSQLYTYVIIPQVLRRLLPQAINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFM 385
              ++K +SL V +G  ++  VG  II+     I      I    + +Y ++   ++   
Sbjct: 157 VTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILILYFAICYPVSKLS 216

Query: 386 NRLNAK 391
             L  +
Sbjct: 217 TYLENR 222


>gi|301155864|emb|CBW15332.1| arginine transporter subunit [Haemophilus parainfluenzae T3T1]
          Length = 227

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 6/227 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L+     + T+  + V S  +   L+L  T L    ++    A+ L  +   L  
Sbjct: 1   MFQEYLAVIAQGIPTSLLLTVVSLFIAFFLALGLTFLLSIGNKLVKSAVNLFLV---LFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y        L      G    S  +    +AL+  +AA+  ++    + 
Sbjct: 58  GTPLLVQFFLIYAGPGQFQWLVDSPLWG--LFSNAWFCAALALALNSAAYSTQLFHGAVK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +GQ E+  ALGL+  +    +L+P A++  +P  T++ + + K ++LA  +   D++
Sbjct: 116 AISKGQWESCAALGLSRLQTL-KILIPYALKRALPSYTNEIILVFKGTALASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +      A+ I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 175 GYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRQLENKVLAFER 221


>gi|110628194|gb|ABG79543.1| putative ABC-arginine transporter [Chrysanthemum yellows
           phytoplasma]
          Length = 609

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 81/222 (36%), Gaps = 14/222 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKAL-----PLL 222
                         + T   + +   ++G + +   T + +   H K    +       L
Sbjct: 383 WHQIKETFPSYLEGLKTTLILAIDGLIIGFLFATSYTLIKNSQSHNKIILNINKGTTYFL 442

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               F++ G+P      L +           F             +    L   + A I 
Sbjct: 443 DTFFFILKGIPVAAQAMLVFY-GIGYLCKDLFEIKR-------LYAGLFVLVLNSLANIN 494

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            I+   +  + +GQ+EAA +LG+  ++    ++ PQ ++  +P +  Q++  +K+SS   
Sbjct: 495 VILMQNIKFLDKGQIEAAHSLGMNQKQVFFSIIFPQTLKRSVPFIIQQFITNIKDSSFFA 554

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            +G A+L     + +  T   I   ++    YLS+  +  L 
Sbjct: 555 IIGIAELSWQAQSNMGSTFNPILPFVMISCFYLSIISIANLL 596


>gi|242309233|ref|ZP_04808388.1| polar amino acid ABC transporter [Helicobacter pullorum MIT
           98-5489]
 gi|239524274|gb|EEQ64140.1| polar amino acid ABC transporter [Helicobacter pullorum MIT
           98-5489]
          Length = 217

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 24/223 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T         FS + G VL              T     L +I  F +  +  +
Sbjct: 14  LQGVLVTFQIAFIAIFFSCIFGFVLGYLM----------TLPNKILNFICRFYLETIRII 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            ++A  + ++F        N I          +  +  S +  A + ++VR  + ++PR 
Sbjct: 64  PILAWLFIVYFGFSSFLNLNGI---------WACILVFSLWGIAEMGDLVRGAISSLPRH 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+  +    ++LPQ+ R ++PPL + +  ++K +SLA  +G +D++ VG  
Sbjct: 115 QSESGRALGLSEMQIQIFIILPQSFRRLLPPLVNLFTRMIKTTSLAALIGVSDMLKVGQQ 174

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II          +  +      +Y  L   ++LF   L  K+A
Sbjct: 175 IIEVNLISYPQASFWVYGGIFALYFMLCYPLSLFSQHLERKLA 217



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 36/67 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + TF +AF  +  + I G ++G      NK++ +ICR Y+E  R IP L  +F +
Sbjct: 13  LLQGVLVTFQIAFIAIFFSCIFGFVLGYLMTLPNKILNFICRFYLETIRIIPILAWLFIV 72

Query: 149 YKSVLSV 155
           Y    S 
Sbjct: 73  YFGFSSF 79


>gi|300694624|ref|YP_003750597.1| amino-acid ABC transporter protein [Ralstonia solanacearum PSI07]
 gi|299076661|emb|CBJ35999.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           PSI07]
          Length = 223

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 11/210 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+      +GI L + A  L+ +  +   ++L L  ++   +  +  +  + L Y   F
Sbjct: 19  LKVTAIVSAIGIPLGMLAGTLAAYAAQP--RSLMLACLARGYVATVRNIPYLILVYLSFF 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L           +          + YT  +  EI+R+ L +VPRGQ  AA++LG++
Sbjct: 77  GLPKL--------GVPASAMAVAIGCTALYTGGYFCEILRAALCSVPRGQSSAALSLGMS 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T    EI
Sbjct: 129 RWQVQRYIVAPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYTEI 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     IY   S+++A     L   +A + 
Sbjct: 189 LAATAAIYWLTSVLLAAAGRSLE-HLARRR 217



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 64/184 (34%), Gaps = 9/184 (4%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++  G+    + GTL        + ++A + R YV   RNIP L++++ 
Sbjct: 14  VLLRGLKVTAIVSAIGIPLGMLAGTLAAYAAQPRSLMLACLARGYVATVRNIPYLILVYL 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            +  +  +        V      L                +  + S   G   +  +  +
Sbjct: 74  SFFGLPKLGVPASAMAVAIGCTALY------TGGYFCEILRAALCSVPRGQSSAALSLGM 127

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           SR   ++   A  LL    FLI    +LV++  K    F    L +  +      +  F 
Sbjct: 128 SRWQVQRYIVAPQLL---GFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFA 184

Query: 268 SLYI 271
              I
Sbjct: 185 YTEI 188


>gi|241759156|ref|ZP_04757264.1| polar amino acid ABC transporter, inner membrane subunit [Neisseria
           flavescens SK114]
 gi|241320575|gb|EER56852.1| polar amino acid ABC transporter, inner membrane subunit [Neisseria
           flavescens SK114]
          Length = 222

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L           +  + +   Y+ T  I       ++   + 
Sbjct: 24  QISLISVAASCVLGTLFGLVL-----RSRNRLVRLIGRFYLETIRIVP-----ILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIGG-------FWVCVWVFTLWGIAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+ R+  R + LPQ++R  +P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRRQVFRYIELPQSVRRALPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFLCCWPLSLLATKLEQK 219



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 37/82 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV  I R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRLIGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIGGFWVCVWVFTLW 99


>gi|124022918|ref|YP_001017225.1| amino acid ABC transporter permease [Prochlorococcus marinus str.
           MIT 9303]
 gi|123963204|gb|ABM77960.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9303]
          Length = 342

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 18/223 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                 TLT+   A     +  LGI+L+L      R       +    +YI         
Sbjct: 126 HAWGGLTLTLLLTACSGALALPLGILLAL-----GRQTRLAVIQRSCSIYIDVMRAVP-- 178

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
              LIA+ +      P+     F+         +   +A + + AA+IAE VR GL A+P
Sbjct: 179 ---LIAVLFFGQLLIPL-----FLPMHLEVNRVLRAVLAFALFAAAYIAEDVRGGLQAIP 230

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R Q EAA  LGL+ ++  +LV+LPQA+R+ +P LT+Q + LL+N+SL   +G  +L+ + 
Sbjct: 231 RTQREAAAVLGLSPKQMIQLVVLPQALRTALPALTNQAVGLLQNTSLMAILGLVELLGIS 290

Query: 354 GTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++      G+ +E+ +    +Y  +   +AL    L  +++
Sbjct: 291 RSLLANPDFIGRYLEVYVWLAGVYWLVCTAMALLARHLEHQLS 333


>gi|156742156|ref|YP_001432285.1| polar amino acid ABC transporter inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
 gi|156233484|gb|ABU58267.1| polar amino acid ABC transporter, inner membrane subunit
           [Roseiflexus castenholzii DSM 13941]
          Length = 217

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 15/220 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +F    +     +   +  +G+V+ +    ++R +     + +   Y  +  +  +P +
Sbjct: 12  FNFIVQGLWVTISVTAVALTVGVVVGIV-MAVARVYGHPALQIVVSAY--SVAVRAVPVI 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V+I L             F  I        F +  +AL   + A+  EI R  L AV  G
Sbjct: 69  VIIFLL------------FFVISRYVNLSPFWAGALALGFASGAYQTEIFRGALQAVQPG 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           QM AA A+G++  +A + V+LPQA+R  +P   ++   +LK+S+L  AVG  +++     
Sbjct: 117 QMIAARAIGMSRLQAIQSVVLPQALRLALPAWGNEATLVLKDSTLVFAVGVPEILRRAQQ 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +  +T +      + + +YL+L+++    +  L  +  L+
Sbjct: 177 VSARTFEPFLAFGVALLLYLALTLITTQALQWLERRYRLQ 216



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 47/149 (31%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I+ G   T  +    +    ++G ++   R+  +  +  +   Y    R +P +V+IF L
Sbjct: 15  IVQGLWVTISVTAVALTVGVVVGIVMAVARVYGHPALQIVVSAYSVAVRAVPVIVIIFLL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +   + +           F +    +          +         I +S      S
Sbjct: 75  FFVISRYVNLSPFWAGALALGFASGAYQTEIFRGALQAVQPGQMIAARAIGMSRLQAIQS 134

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVL 237
               +    ALP       L+    TLV 
Sbjct: 135 VVLPQALRLALPAWGNEATLVLKDSTLVF 163


>gi|207722495|ref|YP_002252931.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206587676|emb|CAQ18258.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 230

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
            +R    +  + + + ++S   I G P L+ + L Y +    P L   +           
Sbjct: 49  WARLSRYRLLRGMVMAWVSA--IRGTPALIHLLLAYYV---VPPLLGLSI-------SPL 96

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +   AL+C T+A++ EI+R  L +VP  Q  AA ALG+   +  R VLLPQ     IPP
Sbjct: 97  TAGIGALACNTSAYLVEILRGALSSVPDAQRAAAQALGMREPQVWRHVLLPQVFYRAIPP 156

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           LTS++  LLK SSL   +   +L +V      Q+   +++  +   +Y  +   ++    
Sbjct: 157 LTSEFTILLKASSLMSIIAVPELATVARNASLQSDLPLQVFAMTAAVYFVILSCVSAASR 216

Query: 387 RLNAKIAL 394
               +++ 
Sbjct: 217 VCERRVSW 224


>gi|120612397|ref|YP_972075.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120590861|gb|ABM34301.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 266

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 16/228 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F  +          L     +        L + L L A RL+R    +      + 
Sbjct: 52  RYWKFFAWPTTWAFLAKGLLGTLASAAMAAVIALSLGLVLLAGRLARTRLVRWPAVAAIE 111

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +     + G PTL+LI + + +            IG    +   ++L IA S  TAA +A
Sbjct: 112 F-----LRGTPTLLLIYVCFLV---------LPSIGIKLGTYWMLTLPIAFS--TAAVVA 155

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RSG++AVPRGQ +AA +LG+T  +    ++ PQA+R I+P L +Q + ++K+++   
Sbjct: 156 EVYRSGVLAVPRGQTDAARSLGMTETQVFFAIVFPQALRYIVPALVAQLVIVVKDTTFGY 215

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            V + +L+     +I      + + LI   +Y  ++  I+    RL  
Sbjct: 216 VVTYGELMQNARVLIANYHSLVPVYLIVAALYCLVNYAISRASRRLGR 263



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 1/107 (0%)

Query: 82  DSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
                 A L  G + T   A    + A  +G ++ AGRL+  +LV W     +E  R  P
Sbjct: 58  AWPTTWAFLAKGLLGTLASAAMAAVIALSLGLVLLAGRLARTRLVRWPAVAAIEFLRGTP 117

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
            L++I+  +  + S+        +L   +  +   +          A
Sbjct: 118 TLLLIYVCFLVLPSIGIKLGTYWMLTLPIAFSTAAVVAEVYRSGVLA 164


>gi|325697576|gb|EGD39461.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 226

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 81/215 (37%), Gaps = 13/215 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                       F  +LG +   F   L R +     K L   YI       L   +   
Sbjct: 13  YQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKVPILKPLATAYIEFSRNTPLLLQLFFL 72

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                     +  +                 I L     +++AE  RSGL AV + Q E 
Sbjct: 73  YFGLPRVGLVLSSE-------------ACATIGLIFLGGSYMAESFRSGLEAVSQTQREV 119

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +++GL   +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 120 GLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKETSVFSAVALADLMFVAKDLIGL 179

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +    +L+ +  YL + + I+L  + +  ++  
Sbjct: 180 YYETDTALLMLVIAYLIILLPISLGFSWIERRLRR 214



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   S Y       F+ T ++AF G++ +  +G LV   R     ++  +   Y+E  RN
Sbjct: 3   WDVVSDYYPLYQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKVPILKPLATAYIEFSRN 62

Query: 139 IPPLVVIFFLYKSVLSV 155
            P L+ +FFLY  +  V
Sbjct: 63  TPLLLQLFFLYFGLPRV 79


>gi|327459024|gb|EGF05372.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 229

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 81/215 (37%), Gaps = 13/215 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                       F  +LG +   F   L R +     K L   YI       L   +   
Sbjct: 16  YQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKIPVLKPLATAYIEFSRNTPLLLQLFFL 75

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                     +  +                 I L     +++AE  RSGL AV + Q E 
Sbjct: 76  FFGLPRVGLVLSSE-------------ACATIGLIFLGGSYMAESFRSGLEAVSQTQREV 122

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +++GL   +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 123 GLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKETSVFSAVALADLMFVAKDLIGL 182

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +    +L+ +  YL + + I+L  + +  ++  
Sbjct: 183 YYETDTALLMLVIAYLIILLPISLGFSWIERRLRR 217



 Score = 38.4 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 38/79 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           V +   S Y       F+ T ++AF G++ +  +G LV   R     ++  +   Y+E  
Sbjct: 4   VNWDVVSDYYPLYQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKIPVLKPLATAYIEFS 63

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P L+ +FFL+  +  V
Sbjct: 64  RNTPLLLQLFFLFFGLPRV 82


>gi|315635240|ref|ZP_07890517.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315475986|gb|EFU66741.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 222

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      +      +   A+I   S     +L +    +  +      KA+   Y+    
Sbjct: 5   LLFQGSNIERLLNGLCVTAEIAFISVFFACILGVIFGVIMTN-RNPIIKAICSFYLEFVR 63

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I  +P LVL+ L Y   F        +  G S          +    +  A + ++VR  
Sbjct: 64  I--IPLLVLLFLAY---FGLAKWFDIHLDGISVC-------ILVFIFWGTAEMGDLVRGA 111

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++ + Q+E+A ALGLT  +    +LLPQ+++ + P   + +  ++K SSLA+ +G  +
Sbjct: 112 LTSIEKHQVESAYALGLTPFQTFVYILLPQSLKRVTPSAINLFTRMVKTSSLAMLIGVVE 171

Query: 349 LVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++ VG  II  +       A+ I  +   +Y  +   ++LF   L  +
Sbjct: 172 VIKVGQQIIEHSLFSNQSAALWIYGVIFGLYFVICYPLSLFSRYLETR 219



 Score = 43.0 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +AF  +  A I+G + G    + N ++  IC  Y+E  R IP LV++F  
Sbjct: 15  LLNGLCVTAEIAFISVFFACILGVIFGVIMTNRNPIIKAICSFYLEFVRIIPLLVLLFLA 74

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 75  YFGLAKWF 82


>gi|91780136|ref|YP_555343.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91692796|gb|ABE35993.1| hydroxyectoine ABC transporter membrane protein / ectoine ABC
           transporter membrane protein [Burkholderia xenovorans
           LB400]
          Length = 219

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 14/222 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            +  L        T  ++ V    L +V++  A  L R       +AL   YI  F   G
Sbjct: 4   WSGYLLLILKGAQTTVELTVMGAALALVMAFVAG-LGRLSRFTAVRALATSYIEFF--RG 60

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
               V +   Y   F  P++       G T++P   +  +AL     A+ AE+VR  ++A
Sbjct: 61  TSVFVQLFWAY---FVLPMV-------GLTLTP-LQAGVLALGLNVGAYGAEVVRGAVVA 109

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V + Q  A +AL L+  +  R V+LPQA+  ++P   +  + LLK +++   +   D+  
Sbjct: 110 VGQEQRSACVALNLSSYQRMRHVILPQALPLMLPTFGNNAIELLKGTAVVSLISLGDMTF 169

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               + +QTG  +      + +Y +++ +IAL + +L  +++
Sbjct: 170 QAQVVRSQTGNTLIPFATILALYFAMACLIALGVRKLERRMS 211



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 30/71 (42%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G   T  L   G   A ++  + G GRLS    V  +   Y+E FR     V 
Sbjct: 7   YLLLILKGAQTTVELTVMGAALALVMAFVAGLGRLSRFTAVRALATSYIEFFRGTSVFVQ 66

Query: 145 IFFLYKSVLSV 155
           +F+ Y  +  V
Sbjct: 67  LFWAYFVLPMV 77


>gi|330882783|gb|EGH16932.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 217

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 13/186 (6%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
           F   L R    +  +    +Y+   ++ G+  LVL+   + L F  P+            
Sbjct: 41  FVIALMRLSPFRALRWFATVYVE--VLRGISALVLL---FYLFFILPLF--------GIR 87

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +  + L    +A+ AEI+RS LI V +GQ +A  AL      A R ++LPQA+  
Sbjct: 88  LSPMTTGVLGLGLTFSAYGAEIIRSALINVSQGQRDAVRALDFGPISAFRRIILPQALPF 147

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           +IPP+ +Q + LLK +SL   +   DL   G  +I   GQ   I  I +  Y  ++  ++
Sbjct: 148 MIPPMGNQLVELLKTTSLVSLITLTDLTFTGSQLITTLGQQTLIWSIVLVCYFVMAWPLS 207

Query: 383 LFMNRL 388
             + R 
Sbjct: 208 WLVKRF 213



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
            A  +  G   T  +     +   ++  ++   RLS  + + W   VYVEV R I  LV+
Sbjct: 14  IARQLAHGAWITLQITVLAELLVLVLSFVIALMRLSPFRALRWFATVYVEVLRGISALVL 73

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGM 169
           +F+L+  +               G+
Sbjct: 74  LFYLFFILPLFGIRLSPMTTGVLGL 98


>gi|311279323|ref|YP_003941554.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308748518|gb|ADO48270.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 239

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 79/190 (41%), Gaps = 1/190 (0%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           +       +     Y   F       LV+    +        +G      G    P F+ 
Sbjct: 45  KLSPHAPVRWFGAAYSVVFRGI-PELLVIYLFYFGGSGLISWIGHLFGADGFIEVPPFLI 103

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +A+   +A++  E+ R+  +A+  G++EAA+A+G+   +    ++LPQ +R  +P L+
Sbjct: 104 GALAIGLISASYQGEVYRAARLALASGEVEAAVAIGMPRWRICSRIMLPQIVRYALPGLS 163

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           + +   LK+S+L    G A+L+         T +     LI    YL L+++      R 
Sbjct: 164 NVWQMSLKDSALVSVTGIAELMRASQIAAGSTREYFLFYLIGGSCYLILTLLSNRAFIRA 223

Query: 389 NAKIALKEKK 398
             ++    ++
Sbjct: 224 ETRLNRAWQR 233


>gi|325697575|gb|EGD39460.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK160]
          Length = 225

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 22/219 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S +LG +  +           K  + L   Y+    +      
Sbjct: 19  LQGLGVTIGISILSVIISLILGTIFGIIM-----TSQSKVVRFLSRAYLEFIRVMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G        +S  I  S +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFLVYFGLARNFDINISGE-------LSAIIVFSLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+ R+    +++PQ +R ++P   +    ++K +SL V +G  ++V VG  
Sbjct: 122 QFESGQALGLSQRQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLN 389
           II+    +I      I    + +Y ++   I+   + L 
Sbjct: 182 IIDSNRLSIPSAAFWIYGCILLLYFAVCFPISKLSSYLE 220



 Score = 44.9 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   +I + I+GT+ G    S +K+V ++ R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVIISLILGTIFGIIMTSQSKVVRFLSRAYLEFIRVMPQLVLLFLV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|225076168|ref|ZP_03719367.1| hypothetical protein NEIFLAOT_01200 [Neisseria flavescens
           NRL30031/H210]
 gi|224952511|gb|EEG33720.1| hypothetical protein NEIFLAOT_01200 [Neisseria flavescens
           NRL30031/H210]
          Length = 222

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L           +  + +   Y+ T  I       ++   + 
Sbjct: 24  QISLISVAASCVLGTLFGLVL-----RSRNRLVRLIGRFYLETIRIVP-----ILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIGG-------FWVCVWVFTLWGVAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+ R+    + LPQ++R  +P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRRQVFCYIELPQSVRRALPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQK 219



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 37/82 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV  I R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRLIGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIGGFWVCVWVFTLW 99


>gi|222106140|ref|YP_002546931.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
 gi|221737319|gb|ACM38215.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
          Length = 240

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 7/231 (3%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
           P+        L     T+  +A  F+   V+GI  +L     +R         L LL + 
Sbjct: 13  PYPPGWGGTLLWGAGATLTISAGAFLIGLVIGIGGALGKLSGNRLL-------LGLLDVY 65

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T  +  +P L+LI   Y    D        F          ++    L     A++ E++
Sbjct: 66  TTAVRAVPELILIVGLYYAGTDGLNRLLQAFGMPVVEVNGLIAAIAVLGVVQGAYMTEVL 125

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R  ++A+P GQ EAA A G++       V LP  + + +P L + ++ + K+S+L   VG
Sbjct: 126 RGAILAIPIGQSEAAKAFGMSPFLRFHRVTLPALLPNALPGLANLWMAVTKDSALVAVVG 185

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +L          T       L    +YL+++++  LF   +  ++   +
Sbjct: 186 YQELALATRLAGASTKHYFLFFLAAALLYLAITLVSNLFFKLIERRVRRGQ 236



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
            I   + PY     +   +L G   T  ++    +   +IG     G+LS N+L+  +  
Sbjct: 6   GILDLLSPYPPG--WGGTLLWGAGATLTISAGAFLIGLVIGIGGALGKLSGNRLLLGLLD 63

Query: 131 VYVEVFRNIPPLVVIFFLYKSVL 153
           VY    R +P L++I  LY +  
Sbjct: 64  VYTTAVRAVPELILIVGLYYAGT 86


>gi|167841277|ref|ZP_02467961.1| ABC amino acid transporter, inner membrane subunit [Burkholderia
           thailandensis MSMB43]
          Length = 217

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 14/229 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   +  + L             +     +GI +      L + F  +  + +   YI 
Sbjct: 3   QFDPAVITQNLHPILSGFGVTIGTWTAGVAIGIAIGFVVAVL-QLFSNRWIRGVLRAYIE 61

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            F     P LV + +   L++  P L       G T+ P    +        A F AE  
Sbjct: 62  CF--RSTPFLVQLFI---LYYGGPAL-------GLTLGPVTAGVLGLGLYGGAYF-AEAF 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG  ++P G +EAA  LGL+  +    V LPQ +  I+P LT+  + L K +++   V 
Sbjct: 109 RSGFRSIPPGHLEAAQCLGLSRWQTVWRVQLPQMLVLIVPALTNLTIVLSKETAVLSIVT 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +L  V   I ++T   +E +L+    YL+L    +     +  ++A 
Sbjct: 169 VPELTFVLTGIGSETFAFVETLLVLCVCYLALVEFTSRAGAWVETRLAR 217



 Score = 39.9 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL GF  T     +G+     IG +V   +L +N+ +  + R Y+E FR+ P LV +F L
Sbjct: 16  ILSGFGVTIGTWTAGVAIGIAIGFVVAVLQLFSNRWIRGVLRAYIECFRSTPFLVQLFIL 75

Query: 149 YKSVL 153
           Y    
Sbjct: 76  YYGGP 80


>gi|126730634|ref|ZP_01746444.1| ABC transporter, membrane spanning protein [Sagittula stellata
           E-37]
 gi|126708800|gb|EBA07856.1| ABC transporter, membrane spanning protein [Sagittula stellata
           E-37]
          Length = 216

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 5/165 (3%)

Query: 237 LIALKYQLHFDKPVLGQ-----FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           ++AL        P+L Q     F       + P + +  IAL  ++AAF++EI R  + A
Sbjct: 52  ILALYVTFFQGTPLLMQLYLLFFGIAYLGVLLPAWAAAAIALIAWSAAFLSEIWRGCVAA 111

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VPRGQ EA+ +L +++ +  R V+LPQA    I P     ++++K +++   +G+ +L  
Sbjct: 112 VPRGQWEASSSLAMSYVEQMRYVVLPQAFSLAIGPTVGFLVDIMKATAVTAIIGYVELFQ 171

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            G  I N T Q  ++      IY  L   +++   R+  K ++  
Sbjct: 172 AGNAIANTTFQPFKVYGFVAIIYFLLCWPVSIAARRIEEKYSVSH 216


>gi|24379379|ref|NP_721334.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|290580619|ref|YP_003485011.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|24377308|gb|AAN58640.1|AE014934_4 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|254997518|dbj|BAH88119.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 224

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 3/223 (1%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                       +     I + S +L  + +LF   L R +  K      ++Y+  F+  
Sbjct: 5   YIFHTFLLSLKGVPVTLVIMIVSILLSFLPALFL-ALGRIYKVKGVTTFSIVYL-AFIRA 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P L+++     L      + + + +    ++P + +  I  S  T   ++EI+RS ++
Sbjct: 63  TPPILLILFFYSLLPSVLNTILKSSGLDIFKLNPIYYAFII-FSLMTTGSLSEILRSAIL 121

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V +GQ+EAA ++GLT  ++   ++ PQA+RS +P L +  +N++K +SL   +   D+ 
Sbjct: 122 TVDKGQLEAAQSIGLTTTQSYLRIIFPQALRSALPNLCNLVINIVKGTSLVFVMTVKDIT 181

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           ++         Q  E  L+   IY+ +  +I    + L  + A
Sbjct: 182 AIAKVEAAHGYQYFESYLVIFIIYIIICGLIQWSFSTLEKRFA 224



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + +    +  GR+   K V     VY+   R  PP+++I F Y
Sbjct: 14  LKGVPVTLVIMIVSILLSFLPALFLALGRIYKVKGVTTFSIVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSV 155
             + SV
Sbjct: 74  SLLPSV 79


>gi|168485720|ref|ZP_02710228.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|168490507|ref|ZP_02714650.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|221231430|ref|YP_002510582.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225858442|ref|YP_002739952.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|298229828|ref|ZP_06963509.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255468|ref|ZP_06979054.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502399|ref|YP_003724339.1| glutamine ABC superfamily transporter membrane protein
           [Streptococcus pneumoniae TCH8431/19A]
 gi|183571195|gb|EDT91723.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC1087-00]
 gi|183574810|gb|EDT95338.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae CDC0288-04]
 gi|220673890|emb|CAR68396.1| putative amino acid ABC transporter, permease protein
           [Streptococcus pneumoniae ATCC 700669]
 gi|225721460|gb|ACO17314.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus pneumoniae 70585]
 gi|298237994|gb|ADI69125.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus pneumoniae TCH8431/19A]
          Length = 219

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPILRIISSIYIEFV---------------- 63

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A +AEI+R GL AV +GQ +A ++ 
Sbjct: 64  --HNVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALAEIIRGGLNAVDKGQYKAGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQASRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E   N+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPILRIISSIYIEFVHNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|148239753|ref|YP_001225140.1| ABC-type amino acid transport system permease component
           [Synechococcus sp. WH 7803]
 gi|147848292|emb|CAK23843.1| ABC-type amino acid transport system permease component
           [Synechococcus sp. WH 7803]
          Length = 299

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 74/236 (31%), Positives = 108/236 (45%), Gaps = 10/236 (4%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P              ++       +    + ++   S  L  VL 
Sbjct: 32  LIRTGLGLSFRWLSRPAGFAISEHLLPFQPSDSMAWALLMGWLNSLRVIACSIALATVLG 91

Query: 202 LFATRLSRH----------FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           + A   SR            +    + +PLL    F  F     +       L     + 
Sbjct: 92  VVAGAASRSNNPLFSALAGLYVGLIRQIPLLLQLLFWYFVAFLGLPSEPLAPLGALIRIS 151

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
            Q   + G  +S EF ++ + LS +T A IAE+VR GL AVPRGQ EA  +LG+      
Sbjct: 152 NQSINVMGLNLSVEFAAVLVGLSVFTGASIAEVVRGGLDAVPRGQWEAFRSLGIGEGLGL 211

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           + V+LPQA+ +I+P L+SQYLNL KNS+L++AVG+ADL +V  T I QTG+AIE  
Sbjct: 212 KSVVLPQALPAILPALSSQYLNLAKNSTLSIAVGYADLYAVSDTAITQTGRAIEGF 267



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 76/170 (44%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R     +Q++L   +  +    +NN+  N+ ++ L L   +LS  AGF I + ++P+  
Sbjct: 2   TRRQRWWIQVLLLAAVLTLAGILINNLTVNLIRTGLGLSFRWLSRPAGFAISEHLLPFQP 61

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S A A+L+G++N+  +    +  AT++G + GA   S N L + +  +YV + R IP 
Sbjct: 62  SDSMAWALLMGWLNSLRVIACSIALATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPL 121

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           L+ + F Y      LP    + +       N              A + V
Sbjct: 122 LLQLLFWYFVAFLGLPSEPLAPLGALIRISNQSINVMGLNLSVEFAAVLV 171


>gi|149021567|ref|ZP_01835622.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
 gi|147930263|gb|EDK81248.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP23-BS72]
          Length = 219

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 89/212 (41%), Gaps = 27/212 (12%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +    + S ++G VL++      R+      + +  +YI                   
Sbjct: 25  YISLIAIILSTIIGTVLAVM-----RNGKNPVLRIISSIYIEFVR--------------- 64

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
              + P L     I          +   A + +T+A + EI+R GL AV +GQ E  ++ 
Sbjct: 65  ---NVPNLLWIFTIFLVFKMKSTPAGITAFTLFTSAALVEIIRGGLNAVDKGQYEVGMSQ 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQ 362
           G T  +    ++LPQA+R ++P + SQ++ ++K++SL    +   +L      ++ +  +
Sbjct: 122 GFTSAQILYYIILPQAIRKMLPAIISQFVTVIKDTSLLYSVIALQELFGASQILMGRYFE 181

Query: 363 A---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + ++   IY S ++ I+   + L  +
Sbjct: 182 PEQVFSLYILIALIYFSFNLAISSLSHMLAKR 213



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +++   +I +TIIGT++   R   N ++  I  +Y+E  RN+P L+ IF +
Sbjct: 16  IFKGFGLTLYISLIAIILSTIIGTVLAVMRNGKNPVLRIISSIYIEFVRNVPNLLWIFTI 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|241764989|ref|ZP_04762986.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241365423|gb|EER60210.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 266

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 16/231 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
             +    F  +          L     +        L   L+L   RL+R    +     
Sbjct: 49  FEARFWEFFAWQTTWAFLAKGLLGTLASAAMAAVIALFFGLALLQGRLARPRLVR----- 103

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              + S  +I  L     + L Y      P                +  L + +   TAA
Sbjct: 104 ---WPSIAVIEFLRGTPTLLLIYVCFLVLPQ--------AGIKLSTYWMLTLPVGLSTAA 152

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            +AE+ R+G++AVPRGQ  AA +LGLT  +    ++ PQA+R I+P L +Q + ++K+++
Sbjct: 153 VVAEVYRAGVLAVPRGQTNAARSLGLTEAQVFFHIVFPQALRYIVPALVAQLVIVVKDTT 212

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
               V + +L+     II      + + L+   +Y  ++  I+    R+  
Sbjct: 213 FGYVVTYGELMQNAKVIIANYHALVPVYLVVAALYCLVNYAISRASKRIGR 263



 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 32/87 (36%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +  G + T   A    + A   G  +  GRL+  +LV W     +E  R  P L
Sbjct: 60  QTTWAFLAKGLLGTLASAAMAAVIALFFGLALLQGRLARPRLVRWPSIAVIEFLRGTPTL 119

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++I+  +  +           +L   +
Sbjct: 120 LLIYVCFLVLPQAGIKLSTYWMLTLPV 146


>gi|238761694|ref|ZP_04622669.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
 gi|238700208|gb|EEP92950.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
          Length = 205

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 15/206 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I + + V+G         + R+                +LI G P L  +A+ Y  
Sbjct: 10  VTLGISLSAAVIGACAGFILQAVCRNSRW----LFWPWRTYVWLIRGTPYLAQLAVFY-- 63

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F             +  I+L+ Y++A+  EI R+   ++  GQ+EAA    
Sbjct: 64  ---------FGLPAIGVTLSAVEATVISLAIYSSAYFGEIFRTAWKSIGHGQLEAAQVHD 114

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  K+   +  PQA+R  +P L +Q++  +K S++A  +   +L    G I+  T   I
Sbjct: 115 ISAWKSFWYIQTPQALRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQIVANTYTYI 174

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
               + +  Y  L+  +++ +  L+ 
Sbjct: 175 VPYTLLILSYWLLAQGVSVGVRLLSR 200


>gi|308126407|ref|ZP_07663749.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AQ4037]
 gi|308108538|gb|EFO46078.1| general L-amino acid transport system permease protein AapM [Vibrio
           parahaemolyticus AQ4037]
          Length = 118

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 3/117 (2%)

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR GL A+P+GQ EAA ALGL++ K T L++LPQA++  IP + + ++ L K++SL + +
Sbjct: 2   VRGGLQAIPKGQYEAADALGLSYWKKTGLIILPQALKITIPSIVNTFIGLFKDTSLVLII 61

Query: 345 GFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G  D++ +G          G A E  +    ++      ++ +   L  K+    K+
Sbjct: 62  GMFDVLGIGQAANTDPEWLGFATESYVFVALVFWVFCFGMSRYSIWLENKLHTGHKR 118


>gi|88808789|ref|ZP_01124299.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 7805]
 gi|88787777|gb|EAR18934.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 7805]
          Length = 299

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 80/225 (35%), Positives = 115/225 (51%), Gaps = 6/225 (2%)

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR 206
           F + S  +   I +H +    G  +    L     ++   A    F+ VLG+V    +  
Sbjct: 41  FRWLSRPAGFAISEHLLPFQPGDSMAWALLMGWLNSLRVIACSIAFATVLGVVAGAASRS 100

Query: 207 LSRHFHEKTG------KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +  F    G      + +PLL    F  F     +       L     V  Q   + G 
Sbjct: 101 NNPLFSALAGLYVGLIRQIPLLLQLLFWYFVAFLGLPSEPLAPLGALIRVSNQAITVMGL 160

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
            +S EF ++ + LS +T A IAE+VR GL AVPRGQ EA  +LG+      + V+LPQA+
Sbjct: 161 NLSVEFAAVLVGLSVFTGAAIAEVVRGGLDAVPRGQWEAFRSLGIGEGLGLQRVVLPQAL 220

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
            +I+P L+SQYLNL KNS+L++AVG+ADL +V  T I QTG+AIE
Sbjct: 221 PAILPALSSQYLNLAKNSTLSIAVGYADLYAVSDTAITQTGRAIE 265



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 1/181 (0%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R     +Q++L + +  +    +NN+  N+ ++ L L   +LS  AGF I + ++P+  
Sbjct: 2   TRRQRWWIQVLLLVAVLTLAGILINNLTVNLIRTGLGLSFRWLSRPAGFAISEHLLPFQP 61

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S A A+L+G++N+  +    +  AT++G + GA   S N L + +  +YV + R IP 
Sbjct: 62  GDSMAWALLMGWLNSLRVIACSIAFATVLGVVAGAASRSNNPLFSALAGLYVGLIRQIPL 121

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV-FSFVLGIVL 200
           L+ + F Y      LP    + +       N              A + V  S   G  +
Sbjct: 122 LLQLLFWYFVAFLGLPSEPLAPLGALIRVSNQAITVMGLNLSVEFAAVLVGLSVFTGAAI 181

Query: 201 S 201
           +
Sbjct: 182 A 182


>gi|300718308|ref|YP_003743111.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064144|emb|CAX61264.1| amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 230

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 9/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              +    +T+     IF+ S +LG +L+        H      + L ++Y  TF   G+
Sbjct: 12  WSIMDAVPVTLAMAVTIFIISTLLGGLLAFIE-----HKKIPVLRQLVVVYKITF--KGI 64

Query: 233 PTLVLIALKYQ-LHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P +V+I L Y  L      +     +   +   P +  + IAL+   AAF AE+V+  L 
Sbjct: 65  PMVVVIFLAYYGLPLALQSMSSLLGVEINAHAMPNWAIIIIALTACVAAFQAEVVKGALN 124

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +   GQ +AA +LG ++ +  R VL PQ + + IP L + ++ ++K  SLA A+   D+ 
Sbjct: 125 SFDSGQSDAAHSLGYSNGQLFRRVLFPQIIVAAIPDLANSFMVIMKALSLAFAIEVVDIF 184

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +            +E  LI +  Y+ ++ ++    +++ A + ++
Sbjct: 185 AQAQLTAALNFYYLEAFLIAVVFYMVIAYVVTKVADKIEAALRVR 229


>gi|224438000|ref|ZP_03658939.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG
           18818]
 gi|313144446|ref|ZP_07806639.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG
           18818]
 gi|313129477|gb|EFR47094.1| glutamine ABC transporter permease GlnP [Helicobacter cinaedi CCUG
           18818]
          Length = 219

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 93/212 (43%), Gaps = 29/212 (13%)

Query: 190 FVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            + S ++G + +          R   + + +  +  PLL    FL +GL  ++ I+L   
Sbjct: 29  ILLSLLIGFICAWILFLKVPFVRYLVNAYVEVARNTPLLIQLFFLYYGLHGVMGISL--- 85

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                E++     L+     ++ E  R+GL ++ + Q+E+A ++
Sbjct: 86  --------------------SEYVCAITGLAFLGGGYMCESFRTGLESMSKSQIESAQSI 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V+LPQ++   +P + +  + LLK +S+   +  AD++ V   II    + 
Sbjct: 126 GLSSFQMMRYVILPQSLGVALPSIGANVIFLLKETSVVGVIALADVMFVTKDIITNYYKT 185

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            E +L+ +  YL + + ++   + L      +
Sbjct: 186 NEALLMLILSYLVVLLPLSFVFSLLEKSYKKR 217



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                  T +++F G++ + +IG +           V ++   YVEV RN P L+ +FFL
Sbjct: 14  FAKALSLTLYISFFGILLSLLIGFICAWILFLKVPFVRYLVNAYVEVARNTPLLIQLFFL 73

Query: 149 YKSV 152
           Y  +
Sbjct: 74  YYGL 77


>gi|322833090|ref|YP_004213117.1| polar amino acid ABC transporter inner membrane subunit [Rahnella
           sp. Y9602]
 gi|321168291|gb|ADW73990.1| polar amino acid ABC transporter, inner membrane subunit [Rahnella
           sp. Y9602]
          Length = 257

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 14/218 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               +   L+ + L +      T   + +   ++  +L++    L R    +  +     
Sbjct: 3   WHPDWAGVLSGQPLQWIISGFLTTLYVSLAGSLIATLLTVLLIAL-RLSTSRIARGAVAA 61

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS-----------PEFMSLYI 271
           ++S F     P LV +   Y   +         +IG +              PEF+    
Sbjct: 62  FVSVF--RNTPLLVQLLFWYFAAYGALPQSWRFYIGDNHPWATFPGNIAWLTPEFLCAAW 119

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            L+ +TAAF+ E V++GL +VP+GQ EAAI+ G + +     +LLPQA+ +   P+T QY
Sbjct: 120 GLALFTAAFLVEEVQAGLNSVPKGQTEAAISQGFSRKTLLLSILLPQALTNAWQPVTGQY 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
           LNL+K SSLA  +GF++L      I +    A E   +
Sbjct: 180 LNLMKLSSLATGIGFSELTYQVSQIESYNAHAFEGFAV 217



 Score = 58.0 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 48/115 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              I+ GF+ T +++ +G + AT++  L+ A RLS +++       +V VFRN P LV +
Sbjct: 16  LQWIISGFLTTLYVSLAGSLIATLLTVLLIALRLSTSRIARGAVAAFVSVFRNTPLLVQL 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            F Y +    LP      +     +    G           A   +  F    ++
Sbjct: 76  LFWYFAAYGALPQSWRFYIGDNHPWATFPGNIAWLTPEFLCAAWGLALFTAAFLV 130


>gi|291535161|emb|CBL08273.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Roseburia intestinalis
           M50/1]
          Length = 445

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 16/160 (10%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL---PLL 222
            +  F+ +    +    +     I V + ++G+V   F   + R  H++ G       L 
Sbjct: 292 FYDNFVKDSRYVYLLKGLGNTLLITVLALLVGVVFG-FLIAIVRTNHDRNGGLTILNALC 350

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +   ++ G P ++ + + Y + F             S  + + +   IA    +AA++A
Sbjct: 351 KLYLTIVRGTPVMIQLLIIYYVIFQ------------SIDTGKIVVAVIAFGLNSAAYVA 398

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
           EIVRSG++AV  GQ EA  +LGL +++    ++LPQA++ 
Sbjct: 399 EIVRSGIMAVDIGQFEAGRSLGLNYKQTMMSIILPQAVKK 438



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 65  SERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK- 123
           SE+AG  + +         S    +L G  NT  +    ++   + G L+   R + ++ 
Sbjct: 283 SEKAG--LSEKFYDNFVKDSRYVYLLKGLGNTLLITVLALLVGVVFGFLIAIVRTNHDRN 340

Query: 124 ----LVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
               ++  +C++Y+ + R  P ++ +  +Y  +   
Sbjct: 341 GGLTILNALCKLYLTIVRGTPVMIQLLIIYYVIFQS 376


>gi|160880804|ref|YP_001559772.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium phytofermentans ISDg]
 gi|160429470|gb|ABX43033.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium phytofermentans ISDg]
          Length = 226

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 91/223 (40%), Gaps = 14/223 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +           KI +   VL I++ L    L +       K+L  +YI   +  
Sbjct: 5   FMKSHIPLYVEAAKMTMKISLIGIVLAILIGLI-CSLIKTLRIPILKSLVNIYIE--ISR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P L+ +   Y           F       V        I L+    +++AE  R+G+ 
Sbjct: 62  NTPLLIQLFFLY-----------FGLPKVGIVLSSESCAIIGLAFQGGSYMAEAFRTGIE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            V   Q E+ ++LG T R+    ++LPQA+ + +P   +  + ++K +S+  AV  ADL+
Sbjct: 111 NVAPIQTESGLSLGFTKRQVYFHIVLPQAIATSVPVFCANIIFMIKETSVFSAVALADLM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            V   +I    +  E + + +  YL + + I+L    +  ++ 
Sbjct: 171 FVAKDLIGIYYKTDEALFLLVTAYLIILLPISLICTWIERRVR 213



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++  G++ A +IG +    +     ++  +  +Y+E+ RN P L+ +FFLY  +  V
Sbjct: 20  TMKISLIGIVLAILIGLICSLIKTLRIPILKSLVNIYIEISRNTPLLIQLFFLYFGLPKV 79

Query: 156 LP 157
             
Sbjct: 80  GI 81


>gi|116513423|ref|YP_812329.1| ABC-type amino acid transport system, permease [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|161507577|ref|YP_001577531.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|260101516|ref|ZP_05751753.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus helveticus DSM 20075]
 gi|116092738|gb|ABJ57891.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|160348566|gb|ABX27240.1| amino acid ABC transporter permease protein [Lactobacillus
           helveticus DPC 4571]
 gi|260084659|gb|EEW68779.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus helveticus DSM 20075]
 gi|325125053|gb|ADY84383.1| ABC transporter [Lactobacillus delbrueckii subsp. bulgaricus 2038]
 gi|328466383|gb|EGF37535.1| amino acid ABC transporter permease [Lactobacillus helveticus MTCC
           5463]
          Length = 224

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S ++G+ +      L R    K  + +  +Y+  F 
Sbjct: 8   VLFEGSNFARLMAGLWTSIWIAAISLIIGLAIGTIFGIL-RTLTNKIIRFVLRIYLEFFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        I L Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  IVPT-----IVLLYLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 115 IESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIME 174

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++VG  II    Q        +  +   +Y  L   ++ +  +L  
Sbjct: 175 VINVGQQIIEANNQQYPTGVFWVYGLIFILYFVLDYPLSAWAKKLTK 221



 Score = 44.9 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 42/85 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +I    IGT+ G  R   NK++ ++ R+Y+E FR +P +V+++ +
Sbjct: 18  LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFVLRIYLEFFRIVPTIVLLYLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   +  +    F   
Sbjct: 78  YYILPRTFHVNWPATWMAVLAFSLW 102


>gi|312865871|ref|ZP_07726092.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098275|gb|EFQ56498.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 230

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/233 (21%), Positives = 105/233 (45%), Gaps = 8/233 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           ++P+      + L      +     +   +  LG +L       +     + G    L  
Sbjct: 1   MVPYTPSYIFKVLPIILSALPVTLWVIALTVFLGTLLG------ASLTWAQVGSDTGLAG 54

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            +   +F L     I L + + +  P    +            + + + +    AA ++E
Sbjct: 55  FARAYVFTLRCTPPIVLLFLVFYGLPQFLTWWLHLDVDGWSRTIFVVVTMVLLFAASVSE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           + ++  +AVP+GQMEA +++GLT  +  R +LLPQ  +  +P + +  LNL+K+++LA  
Sbjct: 115 VFKAAYLAVPKGQMEAGLSIGLTGYQTFRRILLPQIFKIALPNIITAILNLMKDAALAYT 174

Query: 344 VGFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +G  D++  G  +I++     ++E      FIY  L++++++  + L   + L
Sbjct: 175 IGLVDVMGAGNLLISRNLGNYSLETYTAVAFIYWGLALILSVASHLLEHHLDL 227


>gi|269120155|ref|YP_003308332.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614033|gb|ACZ08401.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 217

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 93/229 (40%), Gaps = 14/229 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +          +           +I +      ++L +    +  ++  K    +  +Y+
Sbjct: 1   MELDFIFMKEQIPLFVKASILTLQIALLGIAGSVLLGIV-NSIILYYKIKILNKVVAVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              +    P L+ I   + L+F  P L              +      +     +++ E 
Sbjct: 60  E--VSRNTPLLIQI---FFLYFGLPAL--------GIKLSNYTCALTGIIFLGGSYMTEA 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+GL ++ + Q+E+ +++GL+ R+  R V+ PQA R  +P   + ++ LLK +S+  A+
Sbjct: 107 FRAGLESIEKVQIESGLSIGLSRRQLMRYVIFPQAFRIALPATGANFIFLLKETSVVSAI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             A+L+    ++I    +  E++ + +  Y  L   ++  +     ++ 
Sbjct: 167 SVAELLYTTNSLIAIYYKTYEMLFLLVISYFILIGPLSFILYITERRMK 215



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  +A  G+  + ++G +         K++  +  VYVEV RN P L+ IFFL
Sbjct: 15  FVKASILTLQIALLGIAGSVLLGIVNSIILYYKIKILNKVVAVYVEVSRNTPLLIQIFFL 74

Query: 149 YKSVLSVLPI 158
           Y  + ++   
Sbjct: 75  YFGLPALGIK 84


>gi|225378342|ref|ZP_03755563.1| hypothetical protein ROSEINA2194_04003 [Roseburia inulinivorans DSM
           16841]
 gi|225209779|gb|EEG92133.1| hypothetical protein ROSEINA2194_04003 [Roseburia inulinivorans DSM
           16841]
          Length = 224

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    + +  +    V S   G++  +  TR       K      +  +    I  +P L
Sbjct: 19  LQGLWVALRISLIAVVISIPSGLLFGVLMTR-------KNVVLKAIFRVYLEFIRIMPQL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ L Y   F       +N  G         +  I    +  A ++++VR  LI++P+ 
Sbjct: 72  VLLFLFY---FSTTRTFGWNLSGE-------TASIIVFVLWGTAEMSDLVRGALISIPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E++ ALGLT  +    V++PQA+R +IP   +    ++K +SL + +G  +++ V   
Sbjct: 122 QYESSAALGLTKMQTYLYVIIPQAVRRLIPLSINLITRMIKTTSLILMIGVVEVLKVAQQ 181

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           II          A  I L    +Y      I++    L  K
Sbjct: 182 IIEANRMSSPNAAFGIYLTVFLLYFIACWPISMLAKYLERK 222



 Score = 36.5 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G      ++   ++ +   G L G      N ++  I RVY+E  R +P LV++F  
Sbjct: 18  LLQGLWVALRISLIAVVISIPSGLLFGVLMTRKNVVLKAIFRVYLEFIRIMPQLVLLFLF 77

Query: 149 YKSVLSVLPI 158
           Y S       
Sbjct: 78  YFSTTRTFGW 87


>gi|123441156|ref|YP_001005144.1| ABC transporter, inner-membrane component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088117|emb|CAL10905.1| ABC transporter, inner-membrane component [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 212

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 86/216 (39%), Gaps = 15/216 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L      +     I + + ++G         + R+                +LI G P 
Sbjct: 7   YLPDFARALGVTLGISMSAAIIGACAGFILQAVCRNSRW----LFWPWRTYVWLIRGTPY 62

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L  +A+ Y           F             +  I+L+ Y++A+  EI R+   ++  
Sbjct: 63  LAQLAVFY-----------FGLPAIGVTLSAVEATVISLAIYSSAYFGEIFRTAWKSIGH 111

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA    ++  K+   +  PQA+R  +P L +Q++  +K S++A  +   +L    G
Sbjct: 112 GQLEAAQVHDISAWKSFWHIQTPQALRFSLPLLGNQFILTIKESAVASIITVPELTMTTG 171

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            I+  T   I    + +  Y  L+  +++ +  L+ 
Sbjct: 172 QIVANTYTYIVPYTLLILSYWLLAQGVSVGVRLLSR 207


>gi|32265845|ref|NP_859877.1| hypothetical protein HH0346 [Helicobacter hepaticus ATCC 51449]
 gi|32261894|gb|AAP76943.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 202

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 84/212 (39%), Gaps = 17/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I + S +L     L    +       T K+L +  I  F +  +  + ++A  + +
Sbjct: 3   LTLEIALISIILATFGGLILGFIM------TLKSLIIRGICRFYLECVRIIPILAWLFIV 56

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F        N            S  I  S +  A + ++VR  + ++P+ Q E+  ALG
Sbjct: 57  FFGISQQFDINL-------SAITSAIIVFSLWGVAEVGDLVRGAITSLPKHQSESGKALG 109

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---- 360
           L   +    ++LPQA+R ++P + S    ++K +SL   +G  DL+ VG  II       
Sbjct: 110 LQQWQIMCYIILPQALRRLLPSIISLSTRMIKTTSLVALLGAVDLLKVGQQIIELNKSNP 169

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             +  +       Y  L   ++     L  K 
Sbjct: 170 NASFWVYGGIFCTYFILCYPLSYLSKILEKKY 201



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            + T  +A   +I AT  G ++G      + ++  ICR Y+E  R IP L  +F ++  +
Sbjct: 1   MLLTLEIALISIILATFGGLILGFIMTLKSLIIRGICRFYLECVRIIPILAWLFIVFFGI 60

Query: 153 LSVL 156
               
Sbjct: 61  SQQF 64


>gi|319638913|ref|ZP_07993671.1| ABC transporter [Neisseria mucosa C102]
 gi|317399817|gb|EFV80480.1| ABC transporter [Neisseria mucosa C102]
          Length = 222

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             +I  F +  +  + ++   + 
Sbjct: 24  QISLASVAASCVLGTLFGLVLRSPNRLIR----------FIGRFYLETIRIVPILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIDG-------FWVCVWVFTMWGIAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+  +  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRGQVFRYIELPQSIRRVLPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQK 219



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 39/82 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++ + +  + ++GTL G    S N+L+ +I R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLASVAASCVLGTLFGLVLRSPNRLIRFIGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIDGFWVCVWVFTMW 99


>gi|227432937|ref|ZP_03914879.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351283|gb|EEJ41567.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 236

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 10/239 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + +PF +      +    +T+       +    LG +L+    R  R  +       PL+
Sbjct: 1   MNVPFLIQTFRSAIKAVPITLLITGASLLIGLPLGFLLAWIKIRKIRILY-------PLV 53

Query: 223 YISTFLIFGLPTLVLIALKYQLH---FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              T L+   P ++LI L Y       +  V  + ++      +   +   I  +    A
Sbjct: 54  VAYTSLMRATPMVLLILLFYSTLPSLLNVLVNQKLHWNVKVFDTNPIIYAIIVFALIAVA 113

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            ++E+ RS ++ +  GQ EAA+ +GLT  +A   +++PQA+ S +P + +  LN+LK +S
Sbjct: 114 NLSEVFRSAILTIDPGQKEAALMVGLTPIQAYYRIIIPQALVSAVPNIGNLTLNILKGTS 173

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA  +   ++ +V  T  + T    E  +    IY  L  ++ +    L   +   + +
Sbjct: 174 LAFMMTVQEVTAVAKTAASYTYDYTEAYIDIFIIYFILGTILQIIFKYLERYLGRHKLR 232


>gi|126641442|ref|YP_001084426.1| ABC-type amino acid transport system [Acinetobacter baumannii ATCC
           17978]
          Length = 198

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 9/176 (5%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           T +   L  I+ F I       L+   + L++  P L              F    I L+
Sbjct: 10  TYRVRVLNRIAQFYIELSRNTPLLIQLFFLYYGLPKL--------GIKIDGFACGVIGLT 61

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
               +++AE  R+GL +V +GQ+++A ++GL   +  R V+ PQA+   IP + +  L L
Sbjct: 62  FLGGSYMAEAFRAGLQSVAKGQIDSAKSIGLKPTQIFRYVIFPQALAISIPAIGANCLFL 121

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +K SS+  A+   +L+ V   +I    +  E + + +  YL + ++  ++ N+L+ 
Sbjct: 122 IKESSVVSAIAVVELLFVTKDLIGMDYKTTEALFLLIMAYLII-LLTRVYFNQLSR 176


>gi|329297449|ref|ZP_08254785.1| histidine/lysine/arginine/ornithine ABC transporter permease HisQ
           [Plautia stali symbiont]
          Length = 213

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 3/196 (1%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++ + S VL +VLSL     ++    +    +   Y    LI  +P LVL+ L +  
Sbjct: 15  VTLELALSSVVLAVVLSLIG-AGAKLSRNRLLAMIFEGYTR--LIRSVPDLVLMLLIFYG 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                 ++  I L     A+  E  R   +AVP+GQ+EAA A G
Sbjct: 72  LQIALNAVTDALGMAQFDIDPMVAGIITLGFIYGAYFTETFRGAFLAVPKGQIEAATAFG 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  +  R +L    MR  +P + + +  +LK ++L   +G  D+V         T Q  
Sbjct: 132 FTGSQTFRRILFQAMMRFALPGIGNNWQVILKATALVSLLGLEDVVKATQLAGKSTWQPF 191

Query: 365 EIILIWMFIYLSLSIM 380
              ++   IYL  + +
Sbjct: 192 YFAIVAGVIYLVFTTL 207



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 38/68 (55%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y+  IL G + T  LA S ++ A ++  +    +LS N+L+A I   Y  + R++P LV+
Sbjct: 5   YSEIILKGTLVTLELALSSVVLAVVLSLIGAGAKLSRNRLLAMIFEGYTRLIRSVPDLVL 64

Query: 145 IFFLYKSV 152
           +  ++  +
Sbjct: 65  MLLIFYGL 72


>gi|325686265|gb|EGD28307.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus delbrueckii subsp. lactis DSM 20072]
          Length = 224

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S ++G+ +      L R    K  +    +Y+  F 
Sbjct: 8   VLFEGSNFARLMAGLWTSIWIAAISLIIGLAIGTIFGIL-RTLTNKIIRFALRIYLEFFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        I L Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  IVPT-----IVLLYLVYYILPRTFHVNW-------PATWMAVLAFSLWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +VP+ Q E+ +ALGL+  +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 115 IESVPKSQRESGLALGLSKIQLFRYVLLPQAVKLELPATINLATRVIKTTSLLLVISIME 174

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++VG  II    Q        +  +   +Y  L   ++ +  +L  
Sbjct: 175 VINVGQQIIEANNQQNPTGVFWVYGLIFILYFVLDYPLSAWAKKLTK 221



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +I    IGT+ G  R   NK++ +  R+Y+E FR +P +V+++ +
Sbjct: 18  LMAGLWTSIWIAAISLIIGLAIGTIFGILRTLTNKIIRFALRIYLEFFRIVPTIVLLYLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   +  +    F   
Sbjct: 78  YYILPRTFHVNWPATWMAVLAFSLW 102


>gi|325693721|gb|EGD35640.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK150]
          Length = 226

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 81/215 (37%), Gaps = 13/215 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                       F  +LG +   F   L R +     K L   YI       L   +   
Sbjct: 13  YQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKIPVLKPLATAYIEFSRNTPLLLQLFFL 72

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                     +  +                 I L     +++AE  RSGL AV + Q E 
Sbjct: 73  YFGLPRVGLVLSSE-------------ACATIGLIFLGGSYMAESFRSGLEAVSQTQREV 119

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +++GL   +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 120 GLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKETSVFSAVALADLMFVAKDLIGL 179

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +    +L+ +  YL + + I+L  + +  ++  
Sbjct: 180 YYETDTALLMLVIAYLIILLPISLGFSWIERRLRR 214



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   S Y       F+ T ++AF G++ +  +G LV   R     ++  +   Y+E  RN
Sbjct: 3   WDVVSDYYPLYQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKIPVLKPLATAYIEFSRN 62

Query: 139 IPPLVVIFFLYKSVLSV 155
            P L+ +FFLY  +  V
Sbjct: 63  TPLLLQLFFLYFGLPRV 79


>gi|325519341|gb|EGC98766.1| amino acid ABC transporter permease protein [Burkholderia sp.
           TJI49]
          Length = 152

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 60/136 (44%)

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
           G      F +  I L     A+ AEI+R  ++A+P GQ+EA  A G +     R V LP 
Sbjct: 12  GPVAVNGFAAAVIVLGIVQGAYAAEIIRGAILAIPFGQIEAGRAFGASPGLVFRRVTLPA 71

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
                +    + +L L+K+S+L   VG+ +L+         T + +   L+   +Y +++
Sbjct: 72  MAPYALAGFANLWLILVKDSALISVVGYNELLYTAKQAAGSTREYMRYYLMVAVVYFAIT 131

Query: 379 IMIALFMNRLNAKIAL 394
            +  +    +  +   
Sbjct: 132 SLSGMLFREIERRFGR 147


>gi|238762602|ref|ZP_04623572.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
 gi|238699247|gb|EEP91994.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           kristensenii ATCC 33638]
          Length = 231

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 2/208 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S V G++L+L    + + F  +    L       F    L   L+LI     
Sbjct: 17  VTAKLFLLSVVPGLLLALV-MAIGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIYYGLS 75

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   ++  PR +  A  A 
Sbjct: 76  QFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVAGEAF 135

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V       T   
Sbjct: 136 GMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARAFYAATYSP 195

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
               L+   +YL  + ++    +R   +
Sbjct: 196 FIPFLMAAALYLLCTFILIFLFSRAERR 223



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 2/148 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    ++P  ++  ++  G+    + +AW+ R     FR+ P  + +  +Y
Sbjct: 12  MTGLAVTAKLFLLSVVPGLLLALVMAIGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIY 71

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +     +            L        TL +  N   +V   + G++++        
Sbjct: 72  YGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVA 131

Query: 210 --HFHEKTGKALPLLYISTFLIFGLPTL 235
              F     + +  L +   L  G+P L
Sbjct: 132 GEAFGMSQWQIIRRLVLPATLRRGIPAL 159


>gi|283455611|ref|YP_003360175.1| glutamine transport system permease glnP [Bifidobacterium dentium
           Bd1]
 gi|283102245|gb|ADB09351.1| glnP1 Glutamine transport system permease protein glnP
           [Bifidobacterium dentium Bd1]
          Length = 196

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 85/210 (40%), Gaps = 22/210 (10%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
             V S  +G+++           +    + L  +Y+    I     L+ IA      F +
Sbjct: 2   SVVLSVPVGLIVGWLM-----TMNNPVIRLLTRIYLDFIRIMPQLALLFIAFY---GFAR 53

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                 +  G         +       +  A + ++VR  L ++P  Q E+A  LGL   
Sbjct: 54  AWNWNLDATG---------ACVFVFVLWGGAELGDLVRGALESIPDAQYESAYVLGLGPW 104

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE--- 365
           +    V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  II+          
Sbjct: 105 QTFTRVILPQALRRLLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQIIDANRFQYPTGT 164

Query: 366 --IILIWMFIYLSLSIMIALFMNRLNAKIA 393
             I  +  F+Y  +   +++   RL  + +
Sbjct: 165 LWIYGVIFFMYFIVCWPLSIVARRLEKRWS 194


>gi|118587809|ref|ZP_01545219.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
 gi|118439431|gb|EAV46062.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
          Length = 211

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 13/217 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +         +A + +   VLG +L++    + RH+       L   Y+    I   P +
Sbjct: 1   MWLLAKGALISAVLTIGGGVLGFLLAVVLAAV-RHYKIPVLAQLAAAYVEF--IRNTPLI 57

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + + F  P+L  +         P +    +ALS   +A+ AEI+R+GL ++  G
Sbjct: 58  VQM---FFVAFGLPLLLGY-------QWPFWAHALLALSINFSAYFAEILRAGLASLGAG 107

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALGL    +   V LPQA+ ++ P L SQ++ L   + +   +G  DL   G  
Sbjct: 108 QAEAADALGLPRWLSFVKVCLPQAVAAMYPSLNSQFIFLFLTTGIISEIGVTDLTWAGLV 167

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I ++  ++ EI      IYL +S+     +  L+ ++
Sbjct: 168 IDSRNFRSFEIFFTLTIIYLLMSLGFKTLLALLHDRL 204



 Score = 39.9 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G + +  L   G +   ++  ++ A R     ++A +   YVE  RN P +V +
Sbjct: 1   MWLLAKGALISAVLTIGGGVLGFLLAVVLAAVRHYKIPVLAQLAAAYVEFIRNTPLIVQM 60

Query: 146 FFLYKSVLSVLPIPDHSI 163
           FF+   +  +L       
Sbjct: 61  FFVAFGLPLLLGYQWPFW 78


>gi|302876279|ref|YP_003844912.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|307687011|ref|ZP_07629457.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|302579136|gb|ADL53148.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
          Length = 225

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 89/210 (42%), Gaps = 22/210 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 S +LGI+  +           K+ K    LY+ +  I  +  L+ I      +F
Sbjct: 30  LISIAISSILGIIFGIIM-----TSKRKSIKIFSRLYLESIRIIPILVLLFIF-----YF 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               + + +  G        +   I  S +  A + ++VR  ++++P+ Q E+  A+GLT
Sbjct: 80  GITKILKIHLEGE-------LGSIIVFSLWGTAEMGDLVRGAIMSLPKHQRESGKAIGLT 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----G 361
             +    +++PQ +R ++P   +    ++K +SL V +G  +++ V   II  +      
Sbjct: 133 ENQIYLYIIIPQVVRRLVPAAMNLATRMIKTTSLVVLIGVVEVLKVSQQIIESSVLKNPS 192

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            A  +      +Y  +   ++LF  RL  K
Sbjct: 193 AAFWVYGFCFILYFIICYPMSLFSKRLEKK 222



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 36/71 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   +  ++I+G + G    S  K +    R+Y+E  R IP LV++F  
Sbjct: 18  LLSGLLVTGRIALISIAISSILGIIFGIIMTSKRKSIKIFSRLYLESIRIIPILVLLFIF 77

Query: 149 YKSVLSVLPIP 159
           Y  +  +L I 
Sbjct: 78  YFGITKILKIH 88


>gi|207724366|ref|YP_002254763.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|207739075|ref|YP_002257468.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|206589584|emb|CAQ36545.1| amino acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206592447|emb|CAQ59353.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 261

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +     L    L++       V S   G+ L++      R           L      L 
Sbjct: 27  YERAALLHAAGLSLLVMLGTVVLSLAAGVGLTMLLISPRRWIAR-------LAQGFVALT 79

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              PTLV +   + +       G  ++   + ++P F ++ I LS + AAF AE +R+G+
Sbjct: 80  RNTPTLVQLCCAFLVVNTLITQGLAHWGLANPLAPLFWAVAI-LSLHKAAFHAEALRAGI 138

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP   +EAA +LG   R+    V LP A+R+ +P L +  + L+K SSLA A+   +L
Sbjct: 139 DAVPPAMLEAAASLGFGARERLWRVQLPLALRAALPSLMNNTVELVKASSLASAIAVGEL 198

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 I  Q G A+E +++ +  Y  ++  +     RL  ++ +
Sbjct: 199 TYSTLMIWTQRGNALECMVLLLLFYGIVTYAVHAGGVRLERRLRM 243


>gi|116617290|ref|YP_817661.1| ABC-type amino acid transport permease component [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096137|gb|ABJ61288.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 236

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/239 (21%), Positives = 103/239 (43%), Gaps = 10/239 (4%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + +PF +      +    +T+       +    LG +L+    R  R  +       PL+
Sbjct: 1   MNVPFLIQTFWSAIKAVPITLLITGASLLIGLPLGFLLAWIKIRKIRILY-------PLV 53

Query: 223 YISTFLIFGLPTLVLIALKYQLH---FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              T L+   P ++LI L Y       +  V  + ++      +   +   I  +    A
Sbjct: 54  VAYTSLMRATPMVLLILLFYSTLPSLLNVLVNQKLHWNVKVFDTNPIIYAIIVFALIAVA 113

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            ++E+ RS ++ +  GQ EAA+ +GLT  +A   +++PQA+ S +P + +  LN+LK +S
Sbjct: 114 NLSEVFRSAILTIDPGQKEAALMVGLTPIQAYYRIIIPQALVSAVPNIGNLTLNILKGTS 173

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           LA  +   ++ +V  T  + T    E  +    IY  L  ++ +    L   +   + +
Sbjct: 174 LAFMMTVQEVTAVAKTAASYTYDYTEAYIDIFIIYFILGTILQIIFKYLERYLGRHKLR 232


>gi|146305346|ref|YP_001185811.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina ymp]
 gi|145573547|gb|ABP83079.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas mendocina ymp]
          Length = 221

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 99/239 (41%), Gaps = 18/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +       +  ++  L     T+   A   +    LGIV ++      R F    G  
Sbjct: 1   MAYQFDFVAVLQHSDLLLQGAAFTLGLTAIGTLLGVALGIVGAILRAWRIRPFDRIFG-- 58

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                +   LI   P +V +   +           F          E+ +  +A+     
Sbjct: 59  -----VYVELIRNTPFIVQLFFIF-----------FGLPSLGVRLSEWEAAVLAMVINLG 102

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+R+G+ A+P GQ+EAA AL ++  +  R V+L  A+  + P L+SQ + ++  S
Sbjct: 103 AYSTEIIRAGIQAIPHGQLEAAAALAMSRFETFRHVVLRPALGKVWPALSSQIIIVMLGS 162

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++   +   +L      I ++  +A E  L+   +YL ++I+I   +  +  +  + E+
Sbjct: 163 AVCSQISTEELSFAANFIQSRNFRAFETYLLTTALYLLMAILIRQLLAWVGRRFIMGER 221



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 39/105 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            ++  +L G   T  L   G +    +G +    R    +    I  VYVE+ RN P +V
Sbjct: 12  QHSDLLLQGAAFTLGLTAIGTLLGVALGIVGAILRAWRIRPFDRIFGVYVELIRNTPFIV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            +FF++  + S+             M +N    S   +     A 
Sbjct: 72  QLFFIFFGLPSLGVRLSEWEAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|327459025|gb|EGF05373.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1057]
          Length = 225

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 93/219 (42%), Gaps = 22/219 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S +LG +  +         H K  + L   Y+    +      
Sbjct: 19  LQGLGVTIGISILSVIISLILGTIFGIIM-----TSHSKVVRFLSRAYLEFIRVMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G        +S  I  S +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFLVYFGLARNFNINISGE-------LSAIIVFSLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+ R+    +++PQ +R ++P   +    ++K +SL V +G  ++V VG  
Sbjct: 122 QFESGQALGLSQRQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLN 389
           II+    +I      I    + +Y ++   I+   + L 
Sbjct: 182 IIDSNRLSIPSAAFWIYGCILLLYFAVCFPISKLSSYLE 220



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   +I + I+GT+ G    S +K+V ++ R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGISILSVIISLILGTIFGIIMTSHSKVVRFLSRAYLEFIRVMPQLVLLFLV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|171778291|ref|ZP_02919497.1| hypothetical protein STRINF_00339 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282991|gb|EDT48415.1| hypothetical protein STRINF_00339 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 227

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              +      +    ++ +F  +  I+L  F   L ++++      +  +YI   L    
Sbjct: 8   YENIPLYQQALVLTIRLALFGILGAIILGFFI-SLIKYYNVAILSQICQIYIE--LSRNT 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y L++  P +          V P  +   + L     +++AE  RSGL AV
Sbjct: 65  PLLIQL---YFLYYGLPKV--------GVVLPSELCAIVGLIFLGGSYMAESFRSGLEAV 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q E  +++GL+H +    V+LPQA+   +P L +  + L+K +S+   V  ADL+ +
Sbjct: 114 SKRQYEVGLSIGLSHLQNVFYVILPQAIAVALPSLVANIIFLVKETSVFSIVALADLMYI 173

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +I    +  E +L+ +  YL + + I+L    L  ++
Sbjct: 174 AKDLIGLYYETDEALLMLVVAYLIILLPISLLARILERRL 213



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V T  LA  G++ A I+G  +   +     +++ IC++Y+E+ RN P L+ ++FLY  +
Sbjct: 18  LVLTIRLALFGILGAIILGFFISLIKYYNVAILSQICQIYIELSRNTPLLIQLYFLYYGL 77

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             V  +    +    G+          +      A
Sbjct: 78  PKVGVVLPSELCAIVGLIFLGGSYMAESFRSGLEA 112


>gi|222080931|ref|YP_002540294.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725610|gb|ACM28699.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 236

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 15/213 (7%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +A   +   V G +LSL   RLSR       K +  +Y+  F        +L+     
Sbjct: 30  FLSAVGCLVGVVFGTILSLA--RLSRTRLLLPVKIVAFVYVEVFRRVPFLVTLLVFF--- 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F            +   I+ S  + AF+AEI+R+GL AV   Q+EAA  +
Sbjct: 85  ----------FGAQVLGFDISPLVVTLISTSVISTAFVAEIIRAGLAAVRPSQLEAAEVM 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
             +  +   LV  PQA   I+PP+   ++  +K+++LA  +G  +L   G  +  +   A
Sbjct: 135 NFSPWQTLCLVRWPQAWPLILPPVFGYFVLFIKDTALASQIGVLELTQAGKILNTKGFSA 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +    + +Y  +S  +A     L + +    
Sbjct: 195 LLVFATILILYFLISYPLARLGAYLESNLGASR 227



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 84  SYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLV---AWICRVYVEVFRNI 139
           SY  A+L    + T +L+  G +   + GT++   RLS  +L+     +  VYVEVFR +
Sbjct: 15  SYNIAMLAEAALTTLFLSAVGCLVGVVFGTILSLARLSRTRLLLPVKIVAFVYVEVFRRV 74

Query: 140 PPLVVIFFLYKS 151
           P LV +   +  
Sbjct: 75  PFLVTLLVFFFG 86


>gi|302337440|ref|YP_003802646.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301634625|gb|ADK80052.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 217

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 13/227 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
            N   L      + +     +F FV+   V  LFA  +S     +       L     + 
Sbjct: 3   FNLYVLIEWWPKILSAFGTTLFYFVVCSCVAVLFAILISMLLALRLKGLTCFLRAYIAVF 62

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P LV + L +             FIG     P F    I ++    AFI+EI+R  +
Sbjct: 63  RNTPLLVQLFLLFY---------GLPFIG--IRMPAFFCGLIGVALNEGAFISEIIRGYI 111

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            A+PRG  EA  +LGL+     R  +LPQA+R  +P +T Q   ++K++SL   +  ++L
Sbjct: 112 EALPRGDWEAGESLGLSRFSVIRYAILPQALRDSVPAVTGQISIIIKDTSLFSMIMISEL 171

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
                +I  +T       +I   +YL +  ++ L   ++  +  +K 
Sbjct: 172 TRTANSIYTRTFDT-SGFIISAVLYLFIFFLLTLLSKQIERRYKVKR 217


>gi|239834737|ref|ZP_04683065.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239822800|gb|EEQ94369.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 237

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 1/200 (0%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH-FDKPVL 251
           + + G+ +SL    LS       G  L L   +   +  + +L L+ +            
Sbjct: 31  ALLGGLKISLQVAALSLAIGIPLGLLLALGVGAKTRMARIVSLFLVEIGRGAPALVLLQF 90

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             F           F +  IAL+  T A+ +EI+R+ L ++  GQ EAA ALG +     
Sbjct: 91  MYFGLPATGLTLTSFAAAVIALAWNTGAYTSEIIRASLQSIHHGQREAAEALGFSVLDEL 150

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R VLLPQA+R  +P L    + + + +SL   +   +LVS    I + T + +  +L+  
Sbjct: 151 RFVLLPQALRVALPALLGFAILIFQGTSLCFTIALPELVSNAYEIGSNTFRYMPALLLAG 210

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            +Y ++ I  A  ++ +  +
Sbjct: 211 LLYATICIPAAWIVSYVEKR 230


>gi|167589673|ref|ZP_02382061.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 228

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 11/185 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   + VLG+ + +              +  PL+      I   P +V +   +   F
Sbjct: 25  LALTAVATVLGVAIGVLGAAAYSADAPVAMRLRPLIGAYVEAIRNTPFVVQLFFIF---F 81

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L             E+ +  +A++    A+  EIVR+G+ AVP G +EAA AL ++
Sbjct: 82  GLPAL--------GVHIDEYTAAILAMTLNLGAYSVEIVRAGVAAVPNGHLEAASALAMS 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V+LPQA+  + P L+SQ +  +  S++   +  ADL    G I ++  +A E 
Sbjct: 134 RAQMLRHVVLPQALAKVFPALSSQIVITMLGSAVVSQISVADLTYAAGYIQSRNFRAFET 193

Query: 367 ILIWM 371
             +  
Sbjct: 194 YFVIT 198



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 3/99 (3%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL---VAWICRVYV 133
           + +   + YA     G   T  L     +    IG L  A   +   +   +  +   YV
Sbjct: 5   LQFGELAEYAGVFASGATITLALTAVATVLGVAIGVLGAAAYSADAPVAMRLRPLIGAYV 64

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           E  RN P +V +FF++  + ++    D        M LN
Sbjct: 65  EAIRNTPFVVQLFFIFFGLPALGVHIDEYTAAILAMTLN 103


>gi|238790815|ref|ZP_04634572.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           frederiksenii ATCC 33641]
 gi|238721092|gb|EEQ12775.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           frederiksenii ATCC 33641]
          Length = 240

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 2/208 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S   G++L+L    + + F  +    L       F    L   L+LI     
Sbjct: 26  MTAKLFLLSVFPGLLLALL-MAIGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIYYGLS 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   ++  PR +  A  A 
Sbjct: 85  QFDIVQLGWQDDQPFWLLFRDATFCAVLALVLNTSAYVAELLAGMMVTFPRQEWVAGEAF 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V  +    T   
Sbjct: 145 GMTQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARSFYAATYSP 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
               L+   +YL  + ++    +R   +
Sbjct: 205 FIPFLMAAALYLLCTFLLIFLFSRAERR 232



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 2/146 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L    + P  ++  L+  G+    + +AW+ R     FR+ P  + +  +Y  
Sbjct: 23  GLAMTAKLFLLSVFPGLLLALLMAIGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIYYG 82

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-- 209
           +     +            L         L +  N   +V   + G++++          
Sbjct: 83  LSQFDIVQLGWQDDQPFWLLFRDATFCAVLALVLNTSAYVAELLAGMMVTFPRQEWVAGE 142

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTL 235
            F     + +  L +   L  G+P L
Sbjct: 143 AFGMTQWQIIRRLVLPATLRRGIPAL 168


>gi|227529142|ref|ZP_03959191.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
 gi|227350986|gb|EEJ41277.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus vaginalis ATCC 49540]
          Length = 232

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 101/231 (43%), Gaps = 4/231 (1%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F +       +           + + + ++G+ L++    ++R            L I 
Sbjct: 1   MFDLNFAKDSFNQILAATPLTLIVALVATIIGLGLAILV-VIAREKRIPVLSQF--LAIL 57

Query: 226 TFLIFGLPTLVLIALKYQ-LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              I G P LV + + Y  L     ++ ++ +       P  +  + A      A ++E 
Sbjct: 58  VSFIRGTPILVQLYVVYYGLPQLLVLMNEWGWNTNPNGLPAIIIAFSAYGLNAMANLSES 117

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+   +V  GQ EAA+++G+T  +A   +++PQ + ++IP  T+ +L+L+K+++L   +
Sbjct: 118 IRAAYHSVDFGQYEAALSIGMTPFRAMTQIVIPQLIINLIPNFTNIFLDLIKDTALIYNI 177

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           G  +++     + +   + +E     + IY+ +  + A     +  K+  +
Sbjct: 178 GLVEIMGQANIVSSIGFKYLETYTDALIIYIIICWIFAQLFRLVEGKLRQR 228


>gi|83950491|ref|ZP_00959224.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
 gi|83838390|gb|EAP77686.1| glutamate/glutamine/aspartate/asparagine ABC transporter, permease
           protein [Roseovarius nubinhibens ISM]
          Length = 442

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 24/294 (8%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A  +G ++G     A K++  I    V +   I  +++    +  +  ++      ++ 
Sbjct: 169 IAAALGFVIG---YYAYKILEPIAGSLVAI---IAAVLLPVIWWFGLSGLITGALTDLMP 222

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                + +R      L +         S  +GIVL+L      R       KA+ + +I 
Sbjct: 223 IGIEAVQSRKFGGFMLAILLGIVAIGCSLPIGIVLAL-----GRQSDLLLVKAICVGFIE 277

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L TL+ +A           L    F+   T     + + I ++ + AA++AE++
Sbjct: 278 FIRGVPLITLLFVA----------SLLLNLFLPPGTNFDIILRVMIMMTLFAAAYMAEVI 327

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R GL A+P+GQ E A +LGL + +A RL+++PQA++  IP + S ++ + K+++L   +G
Sbjct: 328 RGGLAALPKGQYEGADSLGLNYWQAQRLIIMPQALKISIPGIVSTFIGIFKDTTLVSIIG 387

Query: 346 FADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             D++ +   I   T   G   E+     F++  +   ++ +   L  K+    
Sbjct: 388 LFDVIGLSNAIRADTAWNGIYWELFAFIAFLFFIVCFSMSRYSMYLERKLQTGH 441



 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+    L    +  +  IG ++  GR S   LV  IC  ++E  R +P + ++F     
Sbjct: 235 GFMLAILLGIVAIGCSLPIGIVLALGRQSDLLLVKAICVGFIEFIRGVPLITLLFVASLL 294

Query: 152 VLSVLPIPDHSIVL 165
           +   LP   +  ++
Sbjct: 295 LNLFLPPGTNFDII 308


>gi|288962582|ref|YP_003452877.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
 gi|288914848|dbj|BAI76333.1| polar amino acid transport system permease protein [Azospirillum
           sp. B510]
          Length = 224

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 14/208 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   +   S VLG+ L +     +R    K    L   Y+   LI   P LV +   +  
Sbjct: 23  TTVALTAVSTVLGVALGIGGAA-ARTSTAKPLAILVGAYVE--LIRNTPFLVQLFFIF-- 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F          E+ +  +A+     A+  EI+R+G+ A P+GQ+EA   LG
Sbjct: 78  ---------FGLPSLGIRLAEWQAAVLAMVINLGAYSTEIIRAGIEATPKGQIEAGAGLG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R V+L  AM  I P LTSQ + ++  SS+   +   +L      I ++  +  
Sbjct: 129 MTGPQIFRYVVLGPAMGKIWPALTSQIVIVMLGSSVCSQIAAEELSFAANFIQSRNFRPF 188

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
           E+  +   +YL+L++ +   ++++  ++
Sbjct: 189 EVYFLATALYLALAVGVRWILSQIGGRL 216



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 40/95 (42%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++S   Y   ++ G V T  L     +    +G    A R S  K +A +   YVE+ R
Sbjct: 6   DFSSLLDYTPVLVDGVVTTVALTAVSTVLGVALGIGGAAARTSTAKPLAILVGAYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P LV +FF++  + S+             M +N
Sbjct: 66  NTPFLVQLFFIFFGLPSLGIRLAEWQAAVLAMVIN 100


>gi|89899054|ref|YP_521525.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343791|gb|ABD67994.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 222

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 14/210 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +   +   I + +F   I + + A  +S     +  +A  + Y+   +I   P L
Sbjct: 14  LPEFWVGFVSTLSISLTAFAGAIAIGIIACAMS-IQPSRLVRAPAVAYVD--VIRATPLL 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             +   Y L+F  P            + PE +   IALS  + A+++EI+RSG++++P G
Sbjct: 71  AQL---YFLYFGLPSF--------GVIMPETVIGIIALSINSGAYVSEIIRSGIMSIPHG 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EA+ + G+ + +  RL++LPQA+R ++ PL  Q + L+K+SSL   +   +L   G T
Sbjct: 120 QVEASASSGMNYWQQMRLIILPQALRPMVSPLIGQAIVLVKDSSLLSLISVLELTRAGQT 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFM 385
           + N     +E +      YL +   + L  
Sbjct: 180 LANDRFMPVEGLATTAVGYLIIYFGLKLMA 209



 Score = 36.8 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 40/84 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             VGFV+T  ++ +    A  IG +  A  +  ++LV      YV+V R  P L  ++FL
Sbjct: 17  FWVGFVSTLSISLTAFAGAIAIGIIACAMSIQPSRLVRAPAVAYVDVIRATPLLAQLYFL 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  + S   I   +++    + +N
Sbjct: 77  YFGLPSFGVIMPETVIGIIALSIN 100


>gi|78184424|ref|YP_376859.1| amino acid ABC transporter permease [Synechococcus sp. CC9902]
 gi|78168718|gb|ABB25815.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. CC9902]
          Length = 324

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 14/215 (6%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
                      +   S +L + L +    L R       +     YI            L
Sbjct: 111 QSWGGFSLTLLLTAGSGMLALPLGVLL-ALGRRSDLPVLRGSSTAYIELMRAVP-----L 164

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           IA+ +      P+     F+         +   +A + + AA+IAE VR GL A+P  Q 
Sbjct: 165 IAVLFFGQLLIPL-----FLPPGVEINRVLRAVVAFALFAAAYIAEDVRGGLQAIPPTQR 219

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           EAA+ LGL+ R+  +LV+LPQA R  +P LT+Q + LL+N+SL   +G  +L+ +  +++
Sbjct: 220 EAAMVLGLSPRQTLQLVVLPQAFRVALPSLTNQAVGLLQNTSLMAILGLVELLGISRSLL 279

Query: 358 NQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
                 G+ +E+ +    +Y      +AL    L 
Sbjct: 280 ANPAFIGRYLEVYIWLAAVYWLACTAMALLARHLE 314



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 68/201 (33%), Gaps = 11/201 (5%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             GF  T  L     + A  +G L+  GR S   ++      Y+E+ R +P + V+FF  
Sbjct: 113 WGGFSLTLLLTAGSGMLALPLGVLLALGRRSDLPVLRGSSTAYIELMRAVPLIAVLFFGQ 172

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV------FSFVLGIVL--S 201
             +   LP       +   +       +             +       + VLG+    +
Sbjct: 173 LLIPLFLPPGVEINRVLRAVVAFALFAAAYIAEDVRGGLQAIPPTQREAAMVLGLSPRQT 232

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L    L + F         L   +  L+     + ++ L   L   + +L    FIG   
Sbjct: 233 LQLVVLPQAFRVALPS---LTNQAVGLLQNTSLMAILGLVELLGISRSLLANPAFIGRYL 289

Query: 262 VSPEFMSLYIALSCYTAAFIA 282
               +++    L+C   A +A
Sbjct: 290 EVYIWLAAVYWLACTAMALLA 310


>gi|307329670|ref|ZP_07608828.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
 gi|306884728|gb|EFN15756.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptomyces violaceusniger Tu 4113]
          Length = 214

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++ +L + L +      R     + +A    +++      L  L      + +  
Sbjct: 19  VELTVYASLLALALGILMAAF-RVAPVASLRAFGTAWVTVLRNTPLTLL-----FFAVML 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P            V P  +   IAL CYT+AFI E VR+G+  VP GQ EAA  LG+T
Sbjct: 73  GLP--------RFGLVLPFTVFAVIALGCYTSAFICEAVRAGINTVPVGQGEAARGLGMT 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA RS+IPP+ S  + L KNS++A +    +L+     +  +    I  
Sbjct: 125 FDQTLSAVVLPQAFRSVIPPIGSTLIALAKNSAIAGSFSVTELLGTYKPLNERGYSVIWS 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+     L  +  ++ 
Sbjct: 185 FVWIAAGYLIITLAISAIFALLERRWGVQR 214



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A  +G L+ A R++    +      +V V RN P  ++ F +   
Sbjct: 14  GFLGTVELTVYASLLALALGILMAAFRVAPVASLRAFGTAWVTVLRNTPLTLLFFAVMLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|169830101|ref|YP_001700259.1| amino-acid ABC transporter permease [Lysinibacillus sphaericus
           C3-41]
 gi|168994589|gb|ACA42129.1| Probable amino-acid ABC transporter permease protein
           [Lysinibacillus sphaericus C3-41]
          Length = 233

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 1/210 (0%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + V + ++ + L      L+R         +  +Y+S      +   + I        
Sbjct: 21  LLVTVVALLIALPLGFLL-ALTRINKIPVIHHIAKIYVSFVRGTPIIIQIFIIYSSIPLM 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
            K +  +++              +I  +  + A + E+ RS L  + +GQ+EAA ++GLT
Sbjct: 80  LKVIFEKYHITYDIYKINPIWYAFIVFAFSSTAILIEVFRSALSTIEKGQLEAAYSIGLT 139

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A   +++PQA+   +P + +  +NL+K +SL  A+   ++        N     +E 
Sbjct: 140 TFQAYTRIIIPQALVVALPNICTATVNLIKATSLGYAMSLPEITLKAKVAANVGYNYVEA 199

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            L    +YL L   +     R    ++  +
Sbjct: 200 YLDIFIVYLILCSTVEYLFKRYEKYLSKYK 229



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 43/104 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G      +    ++ A  +G L+   R++   ++  I ++YV   R  P ++ IF 
Sbjct: 12  VALSGVPIALLVTVVALLIALPLGFLLALTRINKIPVIHHIAKIYVSFVRGTPIIIQIFI 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +Y S+  +L +      + + ++  N       +   ++  I +
Sbjct: 72  IYSSIPLMLKVIFEKYHITYDIYKINPIWYAFIVFAFSSTAILI 115


>gi|241895500|ref|ZP_04782796.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
 gi|241871246|gb|EER74997.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Weissella paramesenteroides ATCC
           33313]
          Length = 220

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 71/147 (48%)

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L     I     +  F +  IA +  ++AF++E+ RS  +AV +GQ +AA +LGL 
Sbjct: 74  GVPMLVILFVIYFGFQTAAFPAAVIAFTISSSAFVSEVYRSSFLAVGQGQWDAAYSLGLP 133

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           +RK  R V+ PQ  R  IP L +  L+L K +SLA  +  +++      I       + I
Sbjct: 134 YRKVVRKVIFPQVFRISIPALGNILLDLFKGTSLAAMITVSEMFMKAQIIAGADQDYMTI 193

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++   +Y     ++ +    L   +A
Sbjct: 194 YIMIAILYWFFCWLMTIAQTTLEKHLA 220


>gi|207722496|ref|YP_002252932.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
 gi|206587677|emb|CAQ18259.1| amino-acid transmembrane protein [Ralstonia solanacearum MolK2]
          Length = 223

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A + V    LG +    A   +     +    L   Y++         LV ++     
Sbjct: 21  VTAIVSVIGIPLGGLAGTLA-AYAVQSRSRVLAGLARGYVAMVRNVPYLILVYLSF---- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F        +          + YT  +  EI+R+ L +VPRGQ  AA++LG
Sbjct: 76  ---------FGLPKLGVPASAMAVAIGCTALYTGGYFCEILRAALHSVPRGQSGAALSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T   +
Sbjct: 127 MSRWQVQRYIVAPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYM 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI+     IY + S+++A     L   +A + 
Sbjct: 187 EILATTAAIYWASSVLLAAAGRSLE-HLARRR 217



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 9/184 (4%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++  G+    + GTL      S ++++A + R YV + RN+P L++++ 
Sbjct: 14  VLLHGLEVTAIVSVIGIPLGGLAGTLAAYAVQSRSRVLAGLARGYVAMVRNVPYLILVYL 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            +  +  +        V      L   G     L    ++     S   G  LSL  +R 
Sbjct: 74  SFFGLPKLGVPASAMAVAIGCTALYTGGYFCEILRAALHSVPRGQS---GAALSLGMSRW 130

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
               +    + L       FLI    +LV++  K    F    L +  +      +  F 
Sbjct: 131 QVQRYIVAPQLLG------FLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFA 184

Query: 268 SLYI 271
            + I
Sbjct: 185 YMEI 188


>gi|146278102|ref|YP_001168261.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556343|gb|ABP70956.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 221

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/229 (22%), Positives = 94/229 (41%), Gaps = 9/229 (3%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +   + L                 +++ + +   V+ L                  L + 
Sbjct: 1   MQDFIRLFFNLEVMAQTLPLLMQGLWMTAKLCAAVIGLGLVGGLFLALGALSHRRWLRWP 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +  LI  L  L  + L   ++   P                F ++ +A     +A+ AEI
Sbjct: 61  AFALIDFLRALPPLVLLIFIYSGLPF--------AGLAISPFAAVAVAFFLNNSAYYAEI 112

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G+ +VP GQ EAA A GLT  +    V+LPQA+R+++P L S  + ++K +SLA  V
Sbjct: 113 YRAGIQSVPTGQTEAARACGLTTGQTLAHVVLPQAVRNVLPDLLSNTVEVVKLTSLASVV 172

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             A+L+       + T  A  ++L  +   L L   +   ++R   ++A
Sbjct: 173 SLAELLYSANMARSLTYNASPLVLAALVY-LVLLWPLVRLVSRYQRRLA 220


>gi|319407435|emb|CBI81086.1| glutamate/aspartate transport system permease protein [Bartonella
           sp. 1-1C]
          Length = 233

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 104/228 (45%), Gaps = 2/228 (0%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +               IF    + G++ S+F T ++  F    G  L ++ +S+  + 
Sbjct: 6   TYSPFNFSEFDFSFFTFDIFCSYILSGLLFSIFLTIVTTVFGLIFGVLLAMMRLSSIKLL 65

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM--SLYIALSCYTAAFIAEIVRSG 288
               ++ I     +     +L  F  +   T +      S  I  + + AA+ AEI+R+G
Sbjct: 66  STLAIIYITAMRSIPLVMVILWFFVLLPLITGTSIGANKSALITFTAFEAAYFAEIMRAG 125

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++++ +GQ  A  ALG+T+ +  R+V+LPQA R+++P   +Q + L ++++L  A+    
Sbjct: 126 ILSISQGQKHAGQALGMTYWQNMRIVILPQAFRNMLPVFLTQIIILFQDTTLVYAISGNS 185

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L++    + N  G   E  ++    Y  +   ++  +  L  KI++  
Sbjct: 186 LLNGFDIVSNNFGVKQEAYILAAIFYFVICFTLSQIVLLLQKKISIIR 233



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 2/176 (1%)

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           F++  + F   +    + +   + + IL G + + +L     +   I G L+   RLS+ 
Sbjct: 3   FINTYSPFNFSEFDFSFFTFDIFCSYILSGLLFSIFLTIVTTVFGLIFGVLLAMMRLSSI 62

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           KL++ +  +Y+   R+IP ++VI + +  +  +      +       F       F  + 
Sbjct: 63  KLLSTLAIIYITAMRSIPLVMVILWFFVLLPLITGTSIGANKSALITFTAFEAAYFAEIM 122

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSR--HFHEKTGKALPLLYISTFLIFGLPTLV 236
                 I       G  L +   +  R     +     LP+      ++F   TLV
Sbjct: 123 RAGILSISQGQKHAGQALGMTYWQNMRIVILPQAFRNMLPVFLTQIIILFQDTTLV 178


>gi|271963750|ref|YP_003337946.1| binding-protein-dependent transporter inner membrane component
           [Streptosporangium roseum DSM 43021]
 gi|270506925|gb|ACZ85203.1| binding-protein-dependent transport systems inner membrane
           component [Streptosporangium roseum DSM 43021]
          Length = 222

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 12/222 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+       + + +LG +L+       R       + +   Y++      L TL
Sbjct: 12  LGAFWLTIRLTLASGLLALILGTILAGM-----RVSPLPVLRGIGTAYVNIVRNTPL-TL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V++     L     V         S  +       I LS YTAAF+ E +R+G+  VP G
Sbjct: 66  VIVFCGLGLGLVLDV-----SFSTSLSTNYLWLSIIGLSGYTAAFVCEAIRAGINTVPLG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA A+GLT  +  RL++LPQA+R++I PL S  + L+KN+++A A+G  +      T
Sbjct: 121 QAEAARAIGLTFFQNLRLIVLPQALRAVIAPLGSVLIALIKNTTIAAAIGVGEASLTMKT 180

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    G A + I   +   +L L++   L    L+ ++A+  
Sbjct: 181 LFESHGDAVVPIFFGFALGFLILTLPTGLLFTWLSKRLAVVR 222



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 45/101 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL  F  T  L  +  + A I+GT++   R+S   ++  I   YV + RN P  +VI F
Sbjct: 10  VILGAFWLTIRLTLASGLLALILGTILAGMRVSPLPVLRGIGTAYVNIVRNTPLTLVIVF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
               +  VL +   + +    ++L+  GLS  T      A 
Sbjct: 70  CGLGLGLVLDVSFSTSLSTNYLWLSIIGLSGYTAAFVCEAI 110


>gi|310644455|ref|YP_003949214.1| amino acid abc transporter, permease protein [Paenibacillus
           polymyxa SC2]
 gi|309249406|gb|ADO58973.1| Amino acid ABC transporter, permease protein [Paenibacillus
           polymyxa SC2]
          Length = 221

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 14/221 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      M    KI  F+ +  +V+ L    +  ++  K    + + YI   L    P L
Sbjct: 12  LPLYGEAMWLTLKIAFFAILFSLVVGLL-CSIVLYYRVKGISGIIVAYIE--LSRNTPLL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y             F        E     + ++     ++AE  R G+ AV + 
Sbjct: 69  VQLYFLYY-----------GFTKIGLHMSEMTCAIVGMTFLGGGYMAEAFRGGIEAVSKT 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+ ++LGL+  +  R V+LPQA    IP L +  + LLK +S+  A+   DL++V   
Sbjct: 118 QTESGLSLGLSKIQLARYVILPQAFSISIPSLGANAIFLLKETSIVGAIALLDLMNVAKD 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +I    +  E +++ +  YL L + +++ +  +  K+   E
Sbjct: 178 LIGMYYKTTESLILLVLAYLVLLLPLSMLLTWVERKVRYAE 218



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 32/79 (40%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +AF  ++ + ++G L         K ++ I   Y+E+ RN P LV ++FLY   
Sbjct: 19  MWLTLKIAFFAILFSLVVGLLCSIVLYYRVKGISGIIVAYIELSRNTPLLVQLYFLYYGF 78

Query: 153 LSVLPIPDHSIVLPFGMFL 171
             +            GM  
Sbjct: 79  TKIGLHMSEMTCAIVGMTF 97


>gi|312864574|ref|ZP_07724805.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus downei F0415]
 gi|311099701|gb|EFQ57914.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus downei F0415]
          Length = 216

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 103/216 (47%), Gaps = 27/216 (12%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+  +  I V S + G++L++      R+   K  K +  +YI    +  +P L+ I 
Sbjct: 18  WTTIYLSFIIIVLSTIFGMILAVM-----RNGKNKIVKLIASIYIEF--VRNVPNLLWIF 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + + +   +                  ++   A + +T+A +AEI+R GL A+ +GQ EA
Sbjct: 71  IVFLVFQLQ----------------ATIAGITAFTIFTSAALAEIIRGGLNAIDQGQTEA 114

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIIN 358
            ++ G T  +  R+++LPQA+R ++P + SQ++ ++K++S L   +   DL      ++ 
Sbjct: 115 GLSQGFTQFQVLRIIVLPQAIRKMLPSIISQFVTVVKDTSFLYSVIALQDLFGKSQILMG 174

Query: 359 QTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +  +      +  +    Y  ++ +I+ +   L+ K
Sbjct: 175 KYFETSQIFTLYFMVAAAYFLVNFLISSYSRHLSKK 210



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 35/67 (52%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T +L+F  ++ +TI G ++   R   NK+V  I  +Y+E  RN+P L+ I
Sbjct: 10  LKFLAQGLWTTIYLSFIIIVLSTIFGMILAVMRNGKNKIVKLIASIYIEFVRNVPNLLWI 69

Query: 146 FFLYKSV 152
           F ++   
Sbjct: 70  FIVFLVF 76


>gi|300741911|ref|ZP_07071932.1| glutamate permease [Rothia dentocariosa M567]
 gi|311111807|ref|YP_003983029.1| glutamine ABC transporter membrane protein [Rothia dentocariosa
           ATCC 17931]
 gi|300381096|gb|EFJ77658.1| glutamate permease [Rothia dentocariosa M567]
 gi|310943301|gb|ADP39595.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Rothia dentocariosa ATCC 17931]
          Length = 227

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 12/231 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
             +F     L    + +       + SFVLG +L+L      R     + +    +Y+  
Sbjct: 8   GALFAKYDVLGAFWVNIQLTFWAAIGSFVLGAILALM-----RISPVPSLRWAGTIYVHL 62

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    L  L+ +AL            Q +F      +  F+   I LS Y A+F+ E +R
Sbjct: 63  FRNTPLTILMTLAL-----LGVWTQFQLSFSTDFETN-FFVYAVIVLSIYHASFVCEAIR 116

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+  VP GQ EAA A+GL      R+++ PQA+R  I PL +  + L KN+++A     
Sbjct: 117 SGVNTVPTGQAEAARAIGLGFMDTARMIIFPQALRGSITPLGNTLIALAKNTTVASVASV 176

Query: 347 ADLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   +  ++I       + I LI+   ++++ + + +     + K+A+K 
Sbjct: 177 AEASGMMKSMIEFDANMVLAIFLIFALGFVAIVVPLGILTTWSSRKLAVKR 227



 Score = 40.3 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L  F     L F   I + ++G ++   R+S    + W   +YV +FRN P  +++    
Sbjct: 17  LGAFWVNIQLTFWAAIGSFVLGAILALMRISPVPSLRWAGTIYVHLFRNTPLTILMTLAL 76

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
             V +   +   +             LS    +    A 
Sbjct: 77  LGVWTQFQLSFSTDFETNFFVYAVIVLSIYHASFVCEAI 115


>gi|290963273|ref|YP_003494455.1| amino acid permease [Streptomyces scabiei 87.22]
 gi|260652799|emb|CBG75932.1| putative amino acid permease [Streptomyces scabiei 87.22]
          Length = 222

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 12/222 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T+   A   + S VLG VL+       R       +    +Y++         L
Sbjct: 12  LAAFWMTLRLTAVSALGSLVLGTVLTGM-----RVCPLPVLRTASQVYVTVARNTP---L 63

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ L   L     +  +F+          +    + L+ YT+AF+ E +RSG+  VP G
Sbjct: 64  TLVLLFTSLGVGANLGVEFS---SQISVNNYWLAVLGLTAYTSAFVCEALRSGINTVPVG 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA A+GL   +    V+LPQA R++IPPL S  + L KN+++A+  G A+       
Sbjct: 121 QAEAARAVGLGFGQTLGFVVLPQAFRAVIPPLGSILIALTKNTTVALVAGVAEASVRMRE 180

Query: 356 IINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +I   G Q I+I L +   ++ L +   L   RL  ++A+  
Sbjct: 181 MIEIYGDQVIQIFLGFAAGFVVLCLPTGLLFGRLARRLAVAR 222



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 42/100 (42%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL  F  T  L     + + ++GT++   R+    ++    +VYV V RN P  +V+ F 
Sbjct: 11  ILAAFWMTLRLTAVSALGSLVLGTVLTGMRVCPLPVLRTASQVYVTVARNTPLTLVLLFT 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
              V + L +   S +     +L   GL+  T      A 
Sbjct: 71  SLGVGANLGVEFSSQISVNNYWLAVLGLTAYTSAFVCEAL 110


>gi|170732942|ref|YP_001764889.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169816184|gb|ACA90767.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 240

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 4/213 (1%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK--ALPLL 222
             +  +L    L    L   +     V   +L ++                      PLL
Sbjct: 6   PKYLSWLWQGFLLTLGLAAASAVAATVGGLLLAVMRHARGRAPRAAAAAYVVAFRNTPLL 65

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
               F  FG+ +L+       L+    V      +   +   EF++ ++ LS YTAAF+A
Sbjct: 66  VQLLFWYFGVASLLPETWIAWLNARHAVSVGPFTLAWPSF--EFVAGWVGLSAYTAAFVA 123

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E   +GL  V R Q +AA ALGLT  ++ R V+LPQA+R  +PPL  QY+NL+KNSSLA+
Sbjct: 124 EECEAGLRGVRRAQHDAAAALGLTPMQSLRYVVLPQAVRIALPPLFGQYMNLVKNSSLAM 183

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           A+G A+L      +  +T Q      +   +Y+
Sbjct: 184 AIGVAELSYASRQVETETFQTFAAFGVATLLYI 216


>gi|296533473|ref|ZP_06896052.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
 gi|296266199|gb|EFH12245.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Roseomonas cervicalis ATCC 49957]
          Length = 226

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 9/183 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           ++    PL ++  F +     L  + +   L F  P +              F + +++L
Sbjct: 53  RSFGIRPLNWLIIFTVDLFRALPPLVIIVLLFFGLPAM--------GLGLSGFAATWLSL 104

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +    AF  EI  +G+ AVP+GQ EAA + GL+     RLV+LPQA+R  IPPLT++ + 
Sbjct: 105 TLVLMAFSEEIYWAGITAVPKGQWEAARSTGLSFLATLRLVVLPQALRITIPPLTNRTIA 164

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + K ++L   VG ++++    + ++ +      + +    YL L I +      +  + A
Sbjct: 165 ITKGTALGSVVGVSEILGAAQSAMSFSANPTP-LTMGAIAYLILFIPVVALGRWIETRFA 223

Query: 394 LKE 396
            K 
Sbjct: 224 WKR 226


>gi|116254798|ref|YP_770634.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259446|emb|CAK10584.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 222

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 92/232 (39%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F + +    L            I++ +     VL        R       KA     I
Sbjct: 1   MTFDINVIFSNLPEILSGAWVTIVIWIITTPAAAVLGFLVAVARRFGGVMLDKAFG---I 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              ++ G P L+ I L Y             F+G S       +  I LS Y AA+ +EI
Sbjct: 58  VIAVLRGTPFLIQIFLVYYGG---------PFVGLSL--DPIPAGVIGLSIYGAAYFSEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            RSG  AVP+G +EA I +GLT  +  R +LLP+    ++PP  +  + L+K +++   +
Sbjct: 107 FRSGFAAVPKGHIEAGICVGLTQGQIIRRILLPEMTMLVLPPSVNMTVILMKETAVLSII 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +L +    I +Q    +E + +    Y +L  +     +    K+    
Sbjct: 167 TVPELTATLSAIGSQQYAFVEALFVLALFYWALVEITGWLGHLAETKLTRFR 218


>gi|325956802|ref|YP_004292214.1| amino acid ABC transporter permease [Lactobacillus acidophilus
           30SC]
 gi|325333367|gb|ADZ07275.1| amino acid ABC transporter permease [Lactobacillus acidophilus
           30SC]
          Length = 224

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L+     +  +  I V S ++G+ L      L R  H K  + +  LY+  F 
Sbjct: 8   VLFEGTNLARLFAGLWASIWIAVVSLLIGLALGTIFGIL-RTMHNKVVRFILRLYLEFFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        I L Y +++  P     N+              +A S + AA  ++IVR  
Sbjct: 67  IVPT-----IVLLYLVYYILPRTFHVNW-------SATWMAVLAFSLWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP+ Q E+ +ALGL++ +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 115 LESVPKSQRESGLALGLSNLQLFRYVLLPQAVKLELPATINLATRVIKTTSLLMVINIME 174

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++VG  II    Q        I      +Y  L   ++ +  RL A
Sbjct: 175 VINVGQQIIEANNQKYPTGVFWIYGFIFILYFILDYPLSAWAKRLTA 221



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   + W+A   ++    +GT+ G  R   NK+V +I R+Y+E FR +P +V+++ +
Sbjct: 18  LFAGLWASIWIAVVSLLIGLALGTIFGILRTMHNKVVRFILRLYLEFFRIVPTIVLLYLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   +  +    F   
Sbjct: 78  YYILPRTFHVNWSATWMAVLAFSLW 102


>gi|220908737|ref|YP_002484048.1| polar amino acid ABC transporter inner membrane subunit [Cyanothece
           sp. PCC 7425]
 gi|219865348|gb|ACL45687.1| polar amino acid ABC transporter, inner membrane subunit
           [Cyanothece sp. PCC 7425]
          Length = 221

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 90/167 (53%), Gaps = 6/167 (3%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           ++ G P L  I L Y       +L QF+    S +   +++   +L+   AA+ +E+ R+
Sbjct: 57  VVRGTPILTQILLLYYG--VGAMLVQFDL---SELVNAWVAGIASLALNYAAYESEVFRA 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL +V RGQ EAA++LGLT  ++   ++LPQA+  +IPPL + ++ +LK+S++   +   
Sbjct: 112 GLASVDRGQNEAALSLGLTGEQSFTRIILPQAIPLMIPPLVNDFIYMLKDSAIVSVIAGT 171

Query: 348 DLVSVGGT-IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL SV     I  +   + +  + + +YL +S+ IA        ++ 
Sbjct: 172 DLTSVMQFWTIRNSSNPLPLFGLALLLYLGMSLPIAWLGRYFERRLR 218


>gi|325578842|ref|ZP_08148889.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325159666|gb|EGC71798.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 227

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 6/227 (2%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L+     + T+  + V +  +   L+L  T L    ++    A+ L  +   L  
Sbjct: 1   MFQEYLAVIAQGIPTSLLLTVVALFIAFFLALGLTFLLSIGNKLVKSAVNLFLV---LFT 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV   L Y        L      G    S  +    +AL+  +AA+  ++    + 
Sbjct: 58  GTPLLVQFFLIYAGPGQFQWLVDSPLWG--LFSNAWFCAALALALNSAAYSTQLFHGAVK 115

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ +GQ E+  ALGL+  +    +L+P A++  +P  T++ + + K ++LA  +   D++
Sbjct: 116 AISKGQWESCAALGLSRIQTL-KILIPYALKRALPSYTNEIILVFKGTALASTITIMDIM 174

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +      A+ I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 175 GYARQLYGTEYDALTIYGIAGGIYLIITGIATLLLRQLENKVLAFER 221


>gi|225350815|ref|ZP_03741838.1| hypothetical protein BIFPSEUDO_02385 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158271|gb|EEG71513.1| hypothetical protein BIFPSEUDO_02385 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 224

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+         S  +G+V+                + L  +Y+    I     L
Sbjct: 17  LQGLWVTVWIAGVSVGLSVPVGLVVGWLM-----TMKNPVIRVLTRIYLDFIRIMPQLAL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + IA      F +      +  G         +       +  A + ++VR  L ++P+ 
Sbjct: 72  LFIAFY---GFARAWNWNLDATG---------ACVFVFVLWGGAELGDLVRGALESIPKA 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGL+  +    V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  
Sbjct: 120 QYESAYVLGLSGWQTFVTVILPQALRRLLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQ 179

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+            I  +  F+Y  +   +++   RL  + +
Sbjct: 180 IIDANRFQYPTGTLWIYGVIFFMYFIVCWPLSIVARRLEKRWS 222



 Score = 36.8 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W+A   +  +  +G +VG      N ++  + R+Y++  R +P L ++F  
Sbjct: 16  LLQGLWVTVWIAGVSVGLSVPVGLVVGWLMTMKNPVIRVLTRIYLDFIRIMPQLALLFIA 75

Query: 149 YKSVLSVLPI 158
           +         
Sbjct: 76  FYGFARAWNW 85


>gi|167587517|ref|ZP_02379905.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Burkholderia ubonensis Bu]
          Length = 255

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 91/211 (43%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             S +LG+ L+L A       R S        +  PLL     L +G   +V        
Sbjct: 32  AASVLLGVPLALAAGARHALLRWSARGWLMLIRGTPLLVQLYLLYYGFGQIV-------- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P     +      +   F    +ALS   + ++A I+R  +  VP G++EA  A G
Sbjct: 84  ----PREWMRDSWASPLLRDAFWYAIVALSVNESTYVATILRGAIAGVPAGEIEAGHAYG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T  +  R ++ P+A R  +P LT + + LLK++ LA  V   D++    T+  +T +  
Sbjct: 140 MTRVQVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVLGTANTLRFETLRVY 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E +     +Y++L  ++ +   RL  ++   
Sbjct: 200 EPLAGAAIVYVALVALLTIPAARLEKRVNRY 230


>gi|91789815|ref|YP_550767.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91699040|gb|ABE45869.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 233

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 90/223 (40%), Gaps = 12/223 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LI 229
            + + +          A   +   V  I L            +   + +P L       +
Sbjct: 5   FHFQSIFASWQLYAEGALGTLGLVVCVIPLGFALAVALALARKIAPQPIPRLVTLYVEFL 64

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P +V +   Y           F         P  M   +AL    +A+  EI+R+G+
Sbjct: 65  RNTPFIVQLFYIY-----------FGLGSMGFPIPPVMGALLALMLNLSAYSTEIIRAGI 113

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ R Q+EA ++L +T  +  R V++  A+  + P L+SQ++  +  +S+   +   DL
Sbjct: 114 DSIHRSQLEAGLSLAMTRAQLYRHVVIMPALARVWPALSSQFVLTMLATSVCSFIPVTDL 173

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           ++    + + T +  E  LI   IYL++++++   +  L   +
Sbjct: 174 MAATKFVESNTSRGFEAYLIPAPIYLTMALLMKWGLAMLGRAL 216


>gi|91787284|ref|YP_548236.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696509|gb|ABE43338.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 218

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 92/221 (41%), Gaps = 13/221 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+       T A++ + +FV+ +   +           +  K +   YI    +  +P L
Sbjct: 11  LAILMGGAITAAEVALGAFVIALAGGMLLAVTVTFARFRLLKFVIAAYIE--WMRNVPAL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + + Y           F            ++  + L    AA + ++  +GL  +  G
Sbjct: 69  AHLFVIY-----------FGLAAVGIRLSPLVAAILGLGLVGAAVLCDVFVAGLKCIHAG 117

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA+++G+T  +    +LLPQ  R   P L +    LLK++S+A A+   +++     
Sbjct: 118 QREAALSVGMTPGQTLAHILLPQMFRVTWPSLGNYTSQLLKDTSIASAIAAPEIMFFARN 177

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++  T +   I L  M +Y ++ + I+    +  +++  K 
Sbjct: 178 LVTSTFETTLIYLAAMLLYAAMVLPISWGFAKTESRMENKR 218


>gi|312865985|ref|ZP_07726206.1| ABC transporter, permease protein [Streptococcus downei F0415]
 gi|311098389|gb|EFQ56612.1| ABC transporter, permease protein [Streptococcus downei F0415]
          Length = 224

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 3/210 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L  + +LF   L R +  K   A  ++Y+  F+    P L+++     
Sbjct: 18  PVTLAIMVVSLLLSFLPALFL-ALGRIYKIKGVTAFSVVYL-AFIRATPPILLILFFYSL 75

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L        + + +    ++P + +  I  S  T   ++EI+R+ ++ V +GQ+EAA ++
Sbjct: 76  LPSVLNAFLKSSGLDIFKLNPIYYAFII-FSLMTTGTLSEILRAAILTVDKGQLEAAQSI 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  ++   V+ PQA+R+ +P L +  +N++K +SL   +   D+ ++         Q 
Sbjct: 135 GLTTTQSYFRVVFPQALRNALPNLCNLVINIVKGTSLVFVMTVKDITAIAKVEAAHGYQY 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            E  L+   IY+ +   I    + L  + +
Sbjct: 195 FESYLVIFIIYIIICGFIQWGFSALEKRFS 224



 Score = 36.8 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ + +    +  GR+   K V     VY+   R  PP+++I F Y
Sbjct: 14  LKGVPVTLAIMVVSLLLSFLPALFLALGRIYKIKGVTAFSVVYLAFIRATPPILLILFFY 73

Query: 150 KSVLSV 155
             + SV
Sbjct: 74  SLLPSV 79


>gi|326318471|ref|YP_004236143.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323375307|gb|ADX47576.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 266

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 16/228 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F  +          L     +        L + L L A RL+R+   +      + 
Sbjct: 52  RYWKFFAWPTTWAFLAKGLLGTLASAAMAAVIALSLGLVLLAGRLARYRLVRWPAVAAIE 111

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +     + G PTL+LI + +                       +  L + +   TAA +A
Sbjct: 112 F-----LRGTPTLLLIYVCF-----------LVLPSAGIKLGTYWMLTLPIGLSTAAVVA 155

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RSG++AVPRGQ +AA +LG+   +    ++ PQA+R I+P L +Q + ++K+++   
Sbjct: 156 EVYRSGVLAVPRGQADAARSLGMKETQVFFAIVFPQALRYIVPALVAQLVIVVKDTTFGY 215

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            V + +L+     +I      + + LI   +Y  ++  I+    RL  
Sbjct: 216 VVTYGELMQNARVLIANYHSLVPVYLIVAALYCLVNYAISRASRRLGR 263



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 1/89 (1%)

Query: 82  DSSYATAILV-GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIP 140
                 A L  G + T   A    + A  +G ++ AGRL+  +LV W     +E  R  P
Sbjct: 58  AWPTTWAFLAKGLLGTLASAAMAAVIALSLGLVLLAGRLARYRLVRWPAVAAIEFLRGTP 117

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
            L++I+  +  + S         +L   +
Sbjct: 118 TLLLIYVCFLVLPSAGIKLGTYWMLTLPI 146


>gi|319897355|ref|YP_004135551.1| arginine transporter subunit [Haemophilus influenzae F3031]
 gi|317432860|emb|CBY81225.1| arginine transporter subunit [Haemophilus influenzae F3031]
          Length = 227

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 3/177 (1%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           ++ +   L  G P LV   L Y        + +        +S  +    +AL+  +AA+
Sbjct: 48  VVNLYLTLFTGTPLLVQFFLIYAGPSQFQWIIESPL--WFFLSNAWFCAALALALNSAAY 105

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             ++    + A+ +GQ E+  ALGL+  +    +L+P A++  +P  +++ + + K ++L
Sbjct: 106 STQLFHGAVKAIHKGQWESCAALGLSRLQTL-KILIPYALKRALPSYSNEIILVFKGTAL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +   D++     +      AI I  I   IYL ++ +  L + +L  K+   E+
Sbjct: 165 TSTITIMDIMGYARQLYGTEYDAITIYGIAGGIYLIITGIATLLLRKLEKKVLAFER 221


>gi|260891038|ref|ZP_05902301.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
 gi|260859065|gb|EEX73565.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
          Length = 219

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F +    + L    LT+       VFS ++GIV +L         + +   A  ++
Sbjct: 1   MDFNFIIENIPKYLEAMKLTVFIGIFGIVFSILIGIVCALV-------LYYRVPAARQIV 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            I   L    P ++ +   Y           F            +   I LS    +++ 
Sbjct: 54  GIYIELSRNTPLVIQLFFLY-----------FGLPKIGITFNSHICAVIGLSFLGGSYMC 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  RSGL +V +GQ E+ +++GLT  +    V+LPQA     P + +  + LLK +S+  
Sbjct: 103 EAFRSGLESVTKGQRESGLSIGLTESQLITNVILPQAFTVSFPAIAANIIFLLKETSVIG 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +   +L+ +   +I    +  E + + +  YL + + ++  +  +  +I 
Sbjct: 163 ILALMELMYLTRDLIGLYYKTNESLFMLVAAYLIIILPVSFILTVIERRIR 213



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 33/74 (44%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T ++   G++ + +IG +              I  +Y+E+ RN P ++ +FFLY  +  +
Sbjct: 20  TVFIGIFGIVFSILIGIVCALVLYYRVPAARQIVGIYIELSRNTPLVIQLFFLYFGLPKI 79

Query: 156 LPIPDHSIVLPFGM 169
               +  I    G+
Sbjct: 80  GITFNSHICAVIGL 93


>gi|157151057|ref|YP_001450274.1| amino acid permease protein SP0711 [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157075851|gb|ABV10534.1| amino acid ABC transporter, permease protein SP0711 [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 226

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                     LT+       + SF+LG+V+S+      RH+     + +  +YI   L  
Sbjct: 9   YYPLYQQAFFLTLHIAVWGIIGSFLLGLVVSII-----RHYRVPILRQIATVYIE--LSR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P L+ +   Y           F       V        I L     +++AE  RSGL 
Sbjct: 62  NTPLLIQLFFLY-----------FGLPRIGLVLSSEACATIGLIFLGGSYMAESFRSGLE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV + Q E  +++GLT R+  R V+LPQA    +P  ++  + L+K +S+   V  ADL+
Sbjct: 111 AVSQTQHEIGLSIGLTPRQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSVVALADLM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            V   +I    +    + + +  YL + + I+L    +  ++ 
Sbjct: 171 YVAKDLIGLYYETDIALAMLVLAYLLMLLPISLLFGWIERRLR 213



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 38/79 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G+I + ++G +V   R     ++  I  VY+E+ 
Sbjct: 1   MDWSIIEQYYPLYQQAFFLTLHIAVWGIIGSFLLGLVVSIIRHYRVPILRQIATVYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P L+ +FFLY  +  +
Sbjct: 61  RNTPLLIQLFFLYFGLPRI 79


>gi|322516241|ref|ZP_08069173.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
 gi|322125305|gb|EFX96670.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus vestibularis ATCC 49124]
          Length = 225

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 17/186 (9%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K  + L  +Y+    I        + L + ++F        N  G        +S  
Sbjct: 49  SKSKIVRLLSRIYLEFIRIMP-----QLVLLFIVYFGLARNFNINISGE-------LSAI 96

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + +  A + ++VR  + ++PR Q E+   LGLT+ +    V++PQ +R ++P   + 
Sbjct: 97  IVFTLWGTAEMGDLVRGSITSLPRHQFESGRTLGLTNGQLYTYVIIPQVLRRLLPQAINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFM 385
              ++K +SL V +G  ++  VG  II+     I      I    + +Y ++   ++   
Sbjct: 157 VTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILILYFAICFPVSKLS 216

Query: 386 NRLNAK 391
             L  +
Sbjct: 217 TYLENR 222


>gi|83746651|ref|ZP_00943700.1| Hypothetical Protein RRSL_03561 [Ralstonia solanacearum UW551]
 gi|83726604|gb|EAP73733.1| Hypothetical Protein RRSL_03561 [Ralstonia solanacearum UW551]
          Length = 258

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 8/224 (3%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTF 227
             L    +T+  +A        +G++L+           L         +  PLL    F
Sbjct: 19  WMLEGFGMTLLVSAASIAGGLAIGLLLTALRAGGRPWLALPARALVAFLRKTPLLVQLFF 78

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
             FG   L+   +   L     +      +   +   EF++    ++ Y  AF +E +R+
Sbjct: 79  WYFGAAQLLGEDVVGALSGLGGLALGGWRLPAPSF--EFLATAFGIALYAGAFCSEELRA 136

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+ AVP GQ+ AA++LG T R A   ++LPQA+R    PL  Q  N LKN+SLA+ +G A
Sbjct: 137 GIRAVPHGQLNAALSLGFTPRAAFVRIVLPQALRVAALPLLGQCANTLKNTSLAMGIGLA 196

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L      +   +  A +   +   +Y ++ +++   +  L  +
Sbjct: 197 ELSYSARQVETDSLLAFQAFAVATLLYAAVILLLQWAVPVLLRR 240



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 1/118 (0%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L GF  T  ++ + +     IG L+ A R      +A   R  V   R  P LV
Sbjct: 15  RYLGWMLEGFGMTLLVSAASIAGGLAIGLLLTALRAGGRPWLALPARALVAFLRKTPLLV 74

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
            +FF Y     +L   D    L     L   G   P  + +  A  F  +   G   S
Sbjct: 75  QLFFWYFGAAQLLGE-DVVGALSGLGGLALGGWRLPAPSFEFLATAFGIALYAGAFCS 131


>gi|325689403|gb|EGD31408.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK115]
          Length = 225

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 92/219 (42%), Gaps = 22/219 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S +LG    +         H K  + L   Y+    +      
Sbjct: 19  LQGLGVTIGVSILSVIISLILGTFFGIIM-----TSHSKVVRFLSRAYLEFIRVMP---- 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             + L + ++F        N  G        +S  I  S +  A + ++VR  + ++P+ 
Sbjct: 70  -QLVLLFLVYFGLARNFDINISGE-------LSAIIVFSLWGTAEMGDLVRGAITSLPKH 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+ R+    +++PQ +R ++P   +    ++K +SL V +G  ++V VG  
Sbjct: 122 QFESGQALGLSQRQLYVYIIIPQVLRRLLPQAINLITRMIKTTSLIVLIGVIEVVKVGQQ 181

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLN 389
           II+    +I      I    + +Y ++   I+   + L 
Sbjct: 182 IIDSNRLSIPSAAFWIYGCILLLYFAVCFPISKLSSYLE 220



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 36/68 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   +I + I+GT  G    S +K+V ++ R Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIGVSILSVIISLILGTFFGIIMTSHSKVVRFLSRAYLEFIRVMPQLVLLFLV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|10955058|ref|NP_059714.1| hypothetical protein pTi_042 [Agrobacterium tumefaciens]
 gi|61229377|sp|P0A4N5|OCCQ_AGRTU RecName: Full=Octopine transport system permease protein occQ
 gi|61229378|sp|P0A4N6|OCCQ_AGRT4 RecName: Full=Octopine transport system permease protein occQ
 gi|154763|gb|AAA50514.1| transport protein [Agrobacterium tumefaciens]
 gi|154769|gb|AAA98379.1| occQ [Agrobacterium tumefaciens]
 gi|496541|emb|CAA82983.1| OccQ [Agrobacterium tumefaciens]
          Length = 237

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 82/230 (35%), Gaps = 3/230 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G   +  G      T  T A  F   F +G+V        S             
Sbjct: 2   DYSQLMGFGPDGWGYDMLRATAMTMAVAF-SGFTIGLVFGCLGAAAS--LSSSGALQAAA 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
              +T L      LV+    +        +       G   +  F+   +A+   + A+ 
Sbjct: 59  SGYTTALRGIPDLLVIYLFYFGSSSVISNVASLFGSSGFVGASTFLIGALAIGVVSGAYQ 118

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            +++R  ++A+ +G++EA  A G+      R ++LPQA R  +P + + +  +LK S+L 
Sbjct: 119 TQVLRGAVLALNKGEIEAGRAYGMGALLLFRRIVLPQAARYALPGVGNVWQLVLKESALI 178

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +G  +L+         T Q     L    +YL ++ +          +
Sbjct: 179 SVIGLVELMRQAQVGSGSTRQPFSFYLTAAALYLLITFVSGQVFRLAETR 228


>gi|332161761|ref|YP_004298338.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318605732|emb|CBY27230.1| histidine ABC transporter, permease protein HisM [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665991|gb|ADZ42635.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 240

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 2/208 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S V G++L+L    + + F  +    L       F    L   L+LI     
Sbjct: 26  VTAKLFLLSVVPGLLLALV-MAVGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIYYGLS 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   ++  PR +  A  A 
Sbjct: 85  QFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVAGEAF 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V       T   
Sbjct: 145 GMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARAFYAATYSP 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
               L+   +YL  + M+    +R   +
Sbjct: 205 FIPFLMAAALYLLCTFMLIFLFSRAERR 232



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 2/148 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    ++P  ++  ++  G+    + +AW+ R     FR+ P  + +  +Y
Sbjct: 21  MTGLAVTAKLFLLSVVPGLLLALVMAVGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIY 80

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +     +            L        TL +  N   +V   + G++++        
Sbjct: 81  YGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVA 140

Query: 210 --HFHEKTGKALPLLYISTFLIFGLPTL 235
              F     + +  L +   L  G+P L
Sbjct: 141 GEAFGMSQWQIIRRLVLPATLRRGIPAL 168


>gi|261400796|ref|ZP_05986921.1| amino acid ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
 gi|269209398|gb|EEZ75853.1| amino acid ABC transporter, permease protein [Neisseria lactamica
           ATCC 23970]
          Length = 222

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L           +  + +   Y+ T  I       ++   + 
Sbjct: 24  QISLISVAASCVLGTLFGLVL-----RSRNRLVRLIGRFYLETIRIVP-----ILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIGG-------FWVCVWVFTLWGIAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+ R+  R + LPQ++R  +P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRRQVFRYIELPQSVRRALPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFLCCWPLSLLAAKLEQK 219



 Score = 43.4 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 37/82 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV  I R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRLIGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIGGFWVCVWVFTLW 99


>gi|49079084|gb|AAT49852.1| PA1257 [synthetic construct]
          Length = 215

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 15/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L F      T   I   + ++G +L +    L       +     LL + 
Sbjct: 1   MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRALLPRASLPLAALLDV- 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 +P L+   L          L  F  I G      F    + L  Y AA+ AE+V
Sbjct: 60  ---FRSVPLLIQFVL----------LNSFKSILGLD-WSAFAVACLVLGVYAAAYCAEVV 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+++VP     AA +LGL++R+    ++LP A R   P   +  L+++K++SL + +G
Sbjct: 106 RGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIG 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+    TI+ +  + + ++ I   +Y  +S ++A    RL  +
Sbjct: 166 IVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVARLGARLERR 211


>gi|254700593|ref|ZP_05162421.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 5 str. 513]
 gi|254704963|ref|ZP_05166791.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           suis bv. 3 str. 686]
 gi|254707524|ref|ZP_05169352.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis M163/99/10]
 gi|254708940|ref|ZP_05170751.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis B2/94]
 gi|254713633|ref|ZP_05175444.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M644/93/1]
 gi|254716013|ref|ZP_05177824.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M13/05/1]
 gi|256030466|ref|ZP_05444080.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           pinnipedialis M292/94/1]
 gi|256059927|ref|ZP_05450112.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           neotomae 5K33]
 gi|256158450|ref|ZP_05456348.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti M490/95/1]
 gi|256253870|ref|ZP_05459406.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           ceti B1/94]
 gi|260169374|ref|ZP_05756185.1| His/Glu/Gln/Arg/opine amino acid ABC transporter permease [Brucella
           sp. F5/99]
 gi|261217780|ref|ZP_05932061.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261221006|ref|ZP_05935287.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|261315005|ref|ZP_05954202.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261316438|ref|ZP_05955635.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261321372|ref|ZP_05960569.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|261323897|ref|ZP_05963094.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261751101|ref|ZP_05994810.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261755663|ref|ZP_05999372.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|265987508|ref|ZP_06100065.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1]
 gi|265996966|ref|ZP_06109523.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|260919590|gb|EEX86243.1| polar amino acid ABC transporter [Brucella ceti B1/94]
 gi|260922869|gb|EEX89437.1| polar amino acid ABC transporter [Brucella ceti M13/05/1]
 gi|261294062|gb|EEX97558.1| polar amino acid ABC transporter [Brucella ceti M644/93/1]
 gi|261295661|gb|EEX99157.1| polar amino acid ABC transporter [Brucella pinnipedialis B2/94]
 gi|261299877|gb|EEY03374.1| polar amino acid ABC transporter [Brucella neotomae 5K33]
 gi|261304031|gb|EEY07528.1| polar amino acid ABC transporter [Brucella pinnipedialis
           M163/99/10]
 gi|261740854|gb|EEY28780.1| polar amino acid ABC transporter [Brucella suis bv. 5 str. 513]
 gi|261745416|gb|EEY33342.1| polar amino acid ABC transporter [Brucella suis bv. 3 str. 686]
 gi|262551434|gb|EEZ07424.1| polar amino acid ABC transporter [Brucella ceti M490/95/1]
 gi|264659705|gb|EEZ29966.1| polar amino acid ABC transporter [Brucella pinnipedialis M292/94/1]
          Length = 219

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +             + TN  I + + +L ++     T L R        A+  + I
Sbjct: 1   MDFSVSALGGAFPQLLPAIGTNLVISIIAMILALIGGTALTIL-RTLGIAPLNAVIGVVI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S   I G P LV I L Y   +  P L                +  +A++  ++ FI EI
Sbjct: 60  SF--IRGTPILVQIFLFY---YGLPAL--------GLDLSPIQAGILAIAFNSSIFITEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL  +  G +EAAIALG+  +     V+LPQ    I+PPL ++   ++K ++L   +
Sbjct: 107 MRGGLSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTIVKGTALLSVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 167 TVVEVLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 218


>gi|328948880|ref|YP_004366217.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328449204|gb|AEB14920.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 220

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 88/221 (39%), Gaps = 14/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           ++ +           K  +   VL I L LF   + R++     K +   Y    L    
Sbjct: 7   HQVIPLYEKAAILTLKAGLAGVVLSIALGLF-CAVIRYWKIPVAKEIVKTYTE--LSRNT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y           F F              I L+    +++AE  RS L  V
Sbjct: 64  PLLIQLFFLY-----------FAFPKMGIKLSSEQCGIIGLTFLGGSYMAETFRSSLETV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            R Q+E+   +GLT  +  R V+LPQA    IP + +  + L+K +S+  AV  ADL+ +
Sbjct: 113 GRVQLESGRCIGLTEFQIVRFVILPQAFSVSIPGICANTMFLIKETSMFSAVALADLMYI 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +I    +  E + + +  Y  L + I +  +    K+ 
Sbjct: 173 AKDLIGLYYKTEEALFLLVVSYFILLLPITILSSFAERKLR 213



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 27/63 (42%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T     +G++ +  +G      R     +   I + Y E+ RN P L+ +FFLY +   +
Sbjct: 20  TLKAGLAGVVLSIALGLFCAVIRYWKIPVAKEIVKTYTELSRNTPLLIQLFFLYFAFPKM 79

Query: 156 LPI 158
              
Sbjct: 80  GIK 82


>gi|326384497|ref|ZP_08206177.1| glutamate abc transporter integral membrane subunit glud [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196842|gb|EGD54036.1| glutamate abc transporter integral membrane subunit glud [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 299

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 13/249 (5%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  LV I      VL+     D  +  PF +         P L     A        L +
Sbjct: 28  IAILVAIAAYVIKVLADNGQLDADMWSPFTVAGTWTTWLLPGLWGTIKAAFVSIVLALIL 87

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
              L   RLS H   +         +   +   +P L+L+   Y L     V+       
Sbjct: 88  GALLGIGRLSDHRWVRVVSG-----VIVEVFRAIPVLILMFFAYYLFAKYAVVPSSQL-- 140

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                  F ++   L+ Y  + IAEI+R+G++AVP+GQ EAA ++GL   +  R++LLPQ
Sbjct: 141 ------SFAAVVFGLTLYNGSVIAEILRAGILAVPKGQSEAASSIGLRKSQMMRMILLPQ 194

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+ +++P L SQ +  LK+S+L  A G+ ++V  G    +  G  +  +L+   I ++++
Sbjct: 195 AVTAMLPALISQMVIALKDSALGYAFGYIEVVRSGIVSASYWGNYLPSLLVVAAIMITIN 254

Query: 379 IMIALFMNR 387
             +    N 
Sbjct: 255 FCLTALANY 263



 Score = 63.8 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 88/259 (33%), Gaps = 20/259 (7%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  N+   ++   +L  I  + +  + +N +                        P+T 
Sbjct: 16  ARRRNLITAVVFIAILVAIAAYVIKVLADNGQLD-----------------ADMWSPFTV 58

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             ++ T +L G   T   AF  ++ A I+G L+G GRLS ++ V  +  V VEVFR IP 
Sbjct: 59  AGTWTTWLLPGLWGTIKAAFVSIVLALILGALLGIGRLSDHRWVRVVSGVIVEVFRAIPV 118

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+++FF Y        +P   +     +F      +   +     A I           S
Sbjct: 119 LILMFFAYYLFAKYAVVPSSQLSFAAVVF-GLTLYNGSVIAEILRAGILAVPKGQSEAAS 177

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI--GG 259
               R S+              +   +   +  L   AL Y   + + V          G
Sbjct: 178 SIGLRKSQMMRMILLPQAVTAMLPALISQMVIALKDSALGYAFGYIEVVRSGIVSASYWG 237

Query: 260 STVSPEFMSLYIALSCYTA 278
           + +    +   I ++    
Sbjct: 238 NYLPSLLVVAAIMITINFC 256


>gi|229816602|ref|ZP_04446900.1| hypothetical protein COLINT_03659 [Collinsella intestinalis DSM
           13280]
 gi|229807808|gb|EEP43612.1| hypothetical protein COLINT_03659 [Collinsella intestinalis DSM
           13280]
          Length = 212

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 22/227 (9%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             N   L +         +I V S +  +V+      L + +  +  + L   YI  F  
Sbjct: 3   IFNATNLVYILGGFIKTIEISVLSIICSVVVGTVL-ALVKSYGPRPFRWLVSAYIELF-- 59

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P L+ I   Y       +                    +A + +T+A +AEIVR+GL
Sbjct: 60  RCTPNLLWILFIYFTVQGIDIFIS----------------TLAFTLFTSAVMAEIVRAGL 103

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP GQ EAA + G       R ++LPQ  R I P L  Q   ++K+SS    +  A+ 
Sbjct: 104 NAVPAGQFEAAQSQGFGFFATMRYIILPQTFRIITPALFGQCTTVIKDSSYLSGINVAEF 163

Query: 350 VSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     ++       Q + +      +Y +L+  I+L + R   K+A
Sbjct: 164 MYTTNVVMAHAVSLDQVLMLYGFVFALYFALNFGISLLVRRYQRKVA 210



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 35/67 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    IL GF+ T  ++   +I + ++GT++   +    +   W+   Y+E+FR  P L+
Sbjct: 7   TNLVYILGGFIKTIEISVLSIICSVVVGTVLALVKSYGPRPFRWLVSAYIELFRCTPNLL 66

Query: 144 VIFFLYK 150
            I F+Y 
Sbjct: 67  WILFIYF 73


>gi|209552106|ref|YP_002284022.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539699|gb|ACI59630.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 220

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 90/236 (38%), Gaps = 17/236 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            ++   F +   ++ L    +T+       V     G +L+L              +A P
Sbjct: 2   QNLDFFFAISSGHQLLDGLWVTLYLTFWSNVIGLTCGFLLALVG----------VSRAWP 51

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L ++ T  +       ++       F  P+L    + G                    AF
Sbjct: 52  LRWLYTAYVEIFRCTPILLQIVWFFFCVPILFNVYWSGEFLGLLILGLNL-------TAF 104

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE  R+ +  +P    +AAIALGL  R     V++PQA R+ +P L +  +   + S+L
Sbjct: 105 NAEAYRASIQGIPPAHHDAAIALGLGKRVTAMYVIMPQAARNAMPVLVTNAIGAFQQSAL 164

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              VG ADL+  G  +  QT + IE       IYL +S++       +  +  L  
Sbjct: 165 VALVGVADLMYQGKLLSTQTYRPIEAYTSVAIIYLVISVIFGQIAGFIERRNELYR 220



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 2/165 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T +L F   +     G L+    +S    + W+   YVE+FR  P L+ I + 
Sbjct: 16  LLDGLWVTLYLTFWSNVIGLTCGFLLALVGVSRAWPLRWLYTAYVEIFRCTPILLQIVWF 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF--ATR 206
           +  V  +  +      L   +   N           +   I        I L L    T 
Sbjct: 76  FFCVPILFNVYWSGEFLGLLILGLNLTAFNAEAYRASIQGIPPAHHDAAIALGLGKRVTA 135

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           +     +    A+P+L  +    F    LV +     L +   +L
Sbjct: 136 MYVIMPQAARNAMPVLVTNAIGAFQQSALVALVGVADLMYQGKLL 180


>gi|238796472|ref|ZP_04639980.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
 gi|238719677|gb|EEQ11485.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
          Length = 240

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 2/208 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S V G++L+L    + + F  +    L       F    L   L+LI     
Sbjct: 26  MTAKLFLLSVVPGMLLALL-MAVGQAFGPRPLSWLIRSITYFFRSTPLYLQLMLIYYGLS 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   ++  PR +  A  A 
Sbjct: 85  QFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVAGEAF 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V       T   
Sbjct: 145 GMSQGQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARAFYASTYSP 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
               L+   +YL  + M+    +R   +
Sbjct: 205 FIPFLMAAALYLLCTFMLIFLFSRAERR 232



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 2/146 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L    ++P  ++  L+  G+    + ++W+ R     FR+ P  + +  +Y  
Sbjct: 23  GLAMTAKLFLLSVVPGMLLALLMAVGQAFGPRPLSWLIRSITYFFRSTPLYLQLMLIYYG 82

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-- 209
           +     +            L        TL +  N   +V   + G++++          
Sbjct: 83  LSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVAGE 142

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTL 235
            F    G+ +  L +   L  G+P L
Sbjct: 143 AFGMSQGQIIRRLVLPATLRRGIPAL 168


>gi|330466995|ref|YP_004404738.1| glutamine ABC transporter permease [Verrucosispora maris AB-18-032]
 gi|328809966|gb|AEB44138.1| glutamine ABC transporter permease protein [Verrucosispora maris
           AB-18-032]
          Length = 255

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 103/253 (40%), Gaps = 14/253 (5%)

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
           ++ F          +                 L+   L +       + + +LG+V+++ 
Sbjct: 14  LLAFAVTGAPGWDRVRASFFDPQIARDALPAVLTGLWLNLRLLVCCAIGALLLGLVIAIL 73

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
            T     F     +AL   Y   F       L LI + Y L    P L          + 
Sbjct: 74  RTLRGPVFF--PIRALATSYTYAFR-----GLPLIIVLYLLTLGVPGLRLQG------MP 120

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  +   +AL    + ++AE+ R+G+ +V   Q+ AA +LGLT+R+  R V+LPQA+R +
Sbjct: 121 PVLVLGGLALVLTYSGYLAEVFRAGIESVHPSQLAAARSLGLTYRQTMRHVVLPQAVRRV 180

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            PPL +  + L K+  L    G  D V        Q+       ++   +++ L+I +  
Sbjct: 181 APPLLNDVVALQKDVGLVSLAGPIDAVRAAQIATAQSFNYTP-YIVAGVLFVLLAIPLIA 239

Query: 384 FMNRLNAKIALKE 396
             +R+  + A ++
Sbjct: 240 VTDRVTLRAARRQ 252


>gi|227877754|ref|ZP_03995788.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus crispatus JV-V01]
 gi|256843607|ref|ZP_05549095.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256850083|ref|ZP_05555513.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|312984336|ref|ZP_07791678.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus CTV-05]
 gi|227862657|gb|EEJ70142.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus crispatus JV-V01]
 gi|256615027|gb|EEU20228.1| ABC amino acid transporter [Lactobacillus crispatus 125-2-CHN]
 gi|256713055|gb|EEU28046.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-1A-US]
 gi|310894261|gb|EFQ43341.1| amino acid ABC transporter, permease protein [Lactobacillus
           crispatus CTV-05]
          Length = 223

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S ++G+ +      L R    +  + +  LY+  F 
Sbjct: 8   VLFEGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGIL-RTLKNRPIRFVLRLYLEFFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I     L+     Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  IVPTVVLL-----YLVYYILPRSLHVNW-------PATWMAVLAFSMWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP+ Q E+ +ALGL   +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 115 LESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIKTTSLLMIINIME 174

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++VG  II    Q        +      +Y  L   ++ +  RL AK
Sbjct: 175 VINVGQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 222



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 42/85 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +I    +GT+ G  R   N+ + ++ R+Y+E FR +P +V+++ +
Sbjct: 18  LMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPTVVLLYLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +   L +   +  +    F   
Sbjct: 78  YYILPRSLHVNWPATWMAVLAFSMW 102


>gi|254430539|ref|ZP_05044242.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Cyanobium sp. PCC 7001]
 gi|197624992|gb|EDY37551.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Cyanobium sp. PCC 7001]
          Length = 418

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 26/266 (9%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
              R++  L    +L    L    I    +       L    L              +  
Sbjct: 171 WALRSLALLWPALYLIGMELISGGIGLARVPSSDWGGLLLTLLQASF--------AILLC 222

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
           F LG+ L+L      R       +   +LYI    + G P + L+ L   +         
Sbjct: 223 FPLGVALAL-----GRRSDLPLLRWGSVLYIEF--VRGAPLITLLFLGQNI-------LG 268

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
           F   GG      + + ++ L+ + AA++AE VRSGL AVP+GQ EAA +LGL   +  R 
Sbjct: 269 FLLPGGLAPERVWRAAWV-LTFFAAAYLAEAVRSGLAAVPKGQREAARSLGLGPLQTLRH 327

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIW 370
           V+LPQA+R  +P + SQ+++LL++++L   +G  +L+     ++      G   E+ L  
Sbjct: 328 VVLPQALRVALPVMVSQFISLLQDTTLLSLIGLLELLGTARAVMANPAFLGDYGEVYLTL 387

Query: 371 MFIYLSLSIMIALFMNRLNAKIALKE 396
             ++      + L    L  ++  + 
Sbjct: 388 AVLFWGCCTALGLGSRALEHRLDPRH 413


>gi|197295287|ref|YP_002153828.1| putative binding-protein-dependent transport system protein
           [Burkholderia cenocepacia J2315]
 gi|195944766|emb|CAR57371.1| putative binding-protein-dependent transport system component
           [Burkholderia cenocepacia J2315]
          Length = 244

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   SF  G++L + A  L +         L  LY            +L+A     
Sbjct: 28  LTFGVAAASFCTGVLLGI-AGALGKLSRYAALVWLARLYTMLVRALPELLCLLLAFYAVA 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +  L     + G      F+   ++L     A++ +I+R+ L+ VP GQ+EAA A G
Sbjct: 87  PAIENALRGSGIVAGDFAFDPFVVAALSLGFIQGAYLTDILRAALVNVPVGQIEAAHAYG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQA 363
           +T  +    + LP A R  +P + + +LN  K++S    +G F DL+         T   
Sbjct: 147 MTPWQTFTRIRLPAAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHY 206

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   L+   ++L LSI        L         +
Sbjct: 207 VFFYLVTAALFLLLSITSTGIFAALERHANRGTTR 241


>gi|85057915|ref|YP_456831.1| ABC-type amino acid transport system, permease and periplasmic
           component [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84790020|gb|ABC65752.1| ABC-type amino acid transport system, permease and periplasmic
           component [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 598

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 4/217 (1%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL-SRHFHEKTGKALPLLYISTFLIFGLPT 234
           LS  +  + T   + +   ++G +L++  T + S   + +T K   L  I +FL   L  
Sbjct: 379 LSEYSTPLKTTLLLALDGVIVGFILAIVLTGIKSIKPNYQTQKPFILGLIQSFLYL-LDA 437

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ I     +     ++  F +   +       S  I L   +A  I  I+   +  + +
Sbjct: 438 ILYIFKSIPVAAQIIIVH-FGWRAYNPELNPMYSGVIVLLLNSAVSITSILLQNIKFLDK 496

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVG 353
           GQ EAA+ALG+T R+    V+LPQ ++  +P +  Q++  +K+S+     VG  D+    
Sbjct: 497 GQEEAALALGMTQRQTFFFVILPQTLKRSLPFVVQQFIVNIKDSACFGGLVGLLDVAWKA 556

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            T I QTG       I   IYL L  +  LF+  L  
Sbjct: 557 KTQIVQTGSIAIPYAITACIYLLLITIANLFVKYLEK 593


>gi|33151971|ref|NP_873324.1| arginine transporter permease subunit ArtM [Haemophilus ducreyi
           35000HP]
 gi|33148193|gb|AAP95713.1| arginine transport system permease protein [Haemophilus ducreyi
           35000HP]
          Length = 227

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 88/213 (41%), Gaps = 10/213 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   + +F+L +  +      ++           L+     L  G P L+   L Y 
Sbjct: 18  MLTAAALMTAFILAVFFTFLLAMGNQWLKM-------LINSYLMLFTGTPLLIQFFLIYY 70

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                        +    +S  +    +AL+  +AA+  ++    L AVP+G+ +A  AL
Sbjct: 71  GP--GQFKWITESVVWQFLSDAWFCAVLALALNSAAYSTQLFYGALKAVPKGKWQACSAL 128

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+       +++P A+R  +P  +++ + + K +SLA  +   D++     +      A
Sbjct: 129 GLSRLDTL-KIMIPYALRRALPSYSNEIILVFKGTSLASTITLLDIMGYARQLYGIEYDA 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + I  I   IYL ++ ++   + ++  ++   E
Sbjct: 188 LAIYGIAGLIYLIITGIMTFILRKVETRVLAFE 220


>gi|116628270|ref|YP_820889.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
 gi|116101547|gb|ABJ66693.1| ABC-type amino acid transport system, permease component
           [Streptococcus thermophilus LMD-9]
          Length = 225

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 17/186 (9%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              K  + L  +Y+    I        + L + ++F        N  G        +S  
Sbjct: 49  SKSKIVRFLSRIYLEFIRIMP-----QLVLLFIVYFGLARNFNINISGE-------LSAI 96

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           I  + +  A + ++VR  + ++PR Q ++  ALGLT+ +    V++PQ +R ++P   + 
Sbjct: 97  IVFTLWGTAEMGDLVRGSITSLPRHQFDSGRALGLTNGQLYTYVIIPQVLRRLLPQAINL 156

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFM 385
              ++K +SL V +G  ++  VG  II+     I      I    + +Y ++   ++   
Sbjct: 157 VTRMIKTTSLVVLIGVVEVTKVGQQIIDSNRLTIPTASFWIYGTILILYFAICYPVSKLS 216

Query: 386 NRLNAK 391
             L  +
Sbjct: 217 TYLENR 222



 Score = 36.8 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 38/68 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  ++   ++ + ++GTL G    S +K+V ++ R+Y+E  R +P LV++F +
Sbjct: 18  ILQGLGVTIRISIVSVLLSLLLGTLFGIVMTSKSKIVRFLSRIYLEFIRIMPQLVLLFIV 77

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 78  YFGLARNF 85


>gi|325067176|ref|ZP_08125849.1| amino acid ABC transporter membrane protein [Actinomyces oris K20]
          Length = 291

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 99/236 (41%), Gaps = 25/236 (10%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G  + ++ L     T+       V +F LGI L        R    +  K L  
Sbjct: 73  KWRYFLGQSVVSQLLEAAGTTLTLGGVAAVLTFPLGIALGWL-----RLLDNRPIKWLVG 127

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L++       +  LV   L     F                  +F  L + +   T+A  
Sbjct: 128 LWVDAMRAVPMLLLVYFFLLVVPRFAT--------------ISDFWKLALPIVMCTSATT 173

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ RSG+ A+ RGQ EAA ALG++     RL+L PQA+R ++P L +Q + ++K ++LA
Sbjct: 174 AEVFRSGVRALDRGQTEAAWALGMSPSLTMRLILAPQALRLMLPTLITQMVTIIKGTTLA 233

Query: 342 VAVGFADLVSVGGTIINQT------GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             + + +L+  G T+I Q           +  +I   +Y+ ++  +      + ++
Sbjct: 234 YVLAYPELMYRGSTMIGQAKIDAHLSVFFQTYVIIAVLYIIVNWSLGALARYIESR 289


>gi|309779095|ref|ZP_07673862.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Ralstonia sp. 5_7_47FAA]
 gi|308922160|gb|EFP67790.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Ralstonia sp. 5_7_47FAA]
          Length = 255

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 13/219 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             N  L+   LT+       + +   G+  +L   RL     + T     L  +   L+ 
Sbjct: 16  YPNGPLAGAALTLWMALWACMMATAAGVGCALLLDRL-----DATPGLRRLARLLRGLLA 70

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  + ++ L +  +F  P+             PE  ++  AL+   AA+I + + +GL 
Sbjct: 71  TLRAIPVLMLMFWAYFLIPM-------ALGVSVPETATVVAALAAVGAAYITQSMEAGLR 123

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV  GQ  AA+ALG++  +A   V+LPQA R ++P L +Q+++ +K++SLA  VG  +L 
Sbjct: 124 AVGAGQRNAALALGMSPPQALLTVVLPQAWRIMLPSLANQWVSTVKDTSLAYIVGVVELS 183

Query: 351 SVGGTIINQT-GQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +    + ++T     E+      +Y  L   I    N L
Sbjct: 184 TAASQVNSRTVAYPAEVFGAVAVLYFLLCTGIEALPNWL 222


>gi|307264381|ref|ZP_07545968.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870268|gb|EFN02025.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 225

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + F      +  +  +  +   A+I   S    +V       L R  +    +A+  
Sbjct: 1   MQNMGFDWLFEGQNAARLSQGLWLTAQISFISVGFSLVFGTLFGLLMRA-NNILVRAVCR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+ T  I       ++   + L+F        +  G       F       + +  A +
Sbjct: 60  FYLETIRIVP-----ILVWLFALYFGLSTWFNLHISG-------FWVCIWVFTLWGVAEM 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++K SSLA
Sbjct: 108 GDLVRGALASIEKHQIESAKALGLNRWQIFQYIELPQGTRRVLPGAINLFTRMVKTSSLA 167

Query: 342 VAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +G  ++V VG  II          +  +  +   +Y  +   ++L   RL  K
Sbjct: 168 ALIGVIEMVKVGQQIIENALLTNPSASFFVYGLIFILYFLICYPLSLLATRLEHK 222



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 40/98 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++F  +  + + GTL G    + N LV  +CR Y+E  R +P LV +F LY  
Sbjct: 21  GLWLTAQISFISVGFSLVFGTLFGLLMRANNILVRAVCRFYLETIRIVPILVWLFALYFG 80

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +   +      +   +F          L     A I
Sbjct: 81  LSTWFNLHISGFWVCIWVFTLWGVAEMGDLVRGALASI 118


>gi|300309585|ref|YP_003773677.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300072370|gb|ADJ61769.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 227

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 14/205 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F                 T  ++   + +LG VL   A  ++R       +A    
Sbjct: 1   MHYEFDFASVAAHWPLLLQGAWTTVQLSFLATLLGFVLG-AACAVARGSRHGWLRAAVSG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   LI   P L+     Y L F    +            P      +AL     A+  
Sbjct: 60  YVE--LIRNTPLLIQ---CYFLIFGLSSV--------GVTMPIMAGATLALVINIGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+GL ++  GQ+EAA  LGL+  +    V+L  A+  + P LTSQ++ ++  SS+  
Sbjct: 107 EIVRAGLESIHHGQLEAASCLGLSPAQVFWHVVLLPAVERVWPALTSQFVLMMLASSILS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEII 367
           +VG  +L+ V   + + T +  E+ 
Sbjct: 167 SVGAEELLGVANRVQSDTFRNFEVF 191



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 38/95 (40%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S +++   +L G   T  L+F   +   ++G      R S +  +      YVE+ R
Sbjct: 6   DFASVAAHWPLLLQGAWTTVQLSFLATLLGFVLGAACAVARGSRHGWLRAAVSGYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           N P L+  +FL   + SV             + +N
Sbjct: 66  NTPLLIQCYFLIFGLSSVGVTMPIMAGATLALVIN 100


>gi|260495457|ref|ZP_05815583.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Fusobacterium sp. 3_1_33]
 gi|260196994|gb|EEW94515.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Fusobacterium sp. 3_1_33]
          Length = 219

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 13/183 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  K + + YI   L    P LV +   + L+F  P +       G   SPE +   I L
Sbjct: 47  KFFKQIIVGYIE--LSRNTPLLVQL---FFLYFGLPKV-------GLRFSPE-ICGIIGL 93

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +    +++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT+  + 
Sbjct: 94  TFLGGSYMIETFRSALETIDKIQKESALSLGMTRWQTMRYVILPQSFVISLPGLTANIIF 153

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK +S+  A+   D++ V   +I    +  E + + +  YL + + I+L    L  K+ 
Sbjct: 154 LLKETSVFSAISLMDMMFVAKDLIGLYYKTEESLFMLVAGYLIILLPISLLGVWLERKLK 213

Query: 394 LKE 396
             E
Sbjct: 214 YVE 216


>gi|126653497|ref|ZP_01725590.1| putative amino acid ABC transporter, permease protein [Bacillus sp.
           B14905]
 gi|126589775|gb|EAZ83909.1| putative amino acid ABC transporter, permease protein [Bacillus sp.
           B14905]
          Length = 233

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 89/234 (38%), Gaps = 5/234 (2%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F +      LS   + +         +  LG +L+L     +R         L  +
Sbjct: 1   MNYQFLLETFFVALSGVPIALLVTVVALFIALPLGFLLAL-----TRINKIPVVHHLAKI 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+S      +   + I         K +  ++               +I  +  + A + 
Sbjct: 56  YVSFVRGTPIIIQIFIIYSSIPLMLKIIFEKYQIPYDIYKINPIWYAFIVFAFSSTAILI 115

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ RS L  + +GQ+EAA ++GLT  +A   ++ PQA+   +P + +  +NL+K +SL  
Sbjct: 116 EVFRSALSTIEKGQLEAAYSVGLTTFQAYTRIITPQALVVALPNICTATVNLIKATSLGY 175

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A+   ++        N     +E  L    +YL L   +     R    ++  +
Sbjct: 176 AMSLPEITLKAKVAANVGYNYVEAYLDIFIVYLILCSTVEYLFKRYEKYLSKYK 229



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 43/104 (41%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
             L G      +    +  A  +G L+   R++   +V  + ++YV   R  P ++ IF 
Sbjct: 12  VALSGVPIALLVTVVALFIALPLGFLLALTRINKIPVVHHLAKIYVSFVRGTPIIIQIFI 71

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
           +Y S+  +L I      +P+ ++  N       +   ++  I +
Sbjct: 72  IYSSIPLMLKIIFEKYQIPYDIYKINPIWYAFIVFAFSSTAILI 115


>gi|254690093|ref|ZP_05153347.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 6 str. 870]
 gi|254694581|ref|ZP_05156409.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 3 str. Tulya]
 gi|254696206|ref|ZP_05158034.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254731124|ref|ZP_05189702.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 4 str. 292]
 gi|256112283|ref|ZP_05453204.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|256258346|ref|ZP_05463882.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella abortus
           bv. 9 str. C68]
 gi|260755631|ref|ZP_05867979.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260758856|ref|ZP_05871204.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260760580|ref|ZP_05872923.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884656|ref|ZP_05896270.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|261214905|ref|ZP_05929186.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|297247189|ref|ZP_06930907.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|260669174|gb|EEX56114.1| polar amino acid ABC transporter [Brucella abortus bv. 4 str. 292]
 gi|260671012|gb|EEX57833.1| polar amino acid ABC transporter [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675739|gb|EEX62560.1| polar amino acid ABC transporter [Brucella abortus bv. 6 str. 870]
 gi|260874184|gb|EEX81253.1| polar amino acid ABC transporter [Brucella abortus bv. 9 str. C68]
 gi|260916512|gb|EEX83373.1| polar amino acid ABC transporter [Brucella abortus bv. 3 str.
           Tulya]
 gi|297174358|gb|EFH33705.1| polar amino acid transport system permease [Brucella abortus bv. 5
           str. B3196]
 gi|326409953|gb|ADZ67018.1| His/Glu/Gln/Arg/opine family amino acid ABC transporter permease
           [Brucella melitensis M28]
 gi|326539669|gb|ADZ87884.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family protein [Brucella
           melitensis M5-90]
          Length = 219

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 14/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +             + TN  I + + +L ++     T L R        A+  + I
Sbjct: 1   MDFSVSALGGAFPQLLPAIGTNLVISIIAMILALIGGTALTIL-RTLGIAPLNAVIGVVI 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S   I G P LV I L Y   +  P L                +  +A++  ++ FI EI
Sbjct: 60  SF--IRGTPILVQIFLFY---YGLPAL--------GLDLSPIQAGILAIAFNSSIFITEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R GL  +  G +EAAIALG+  +     V+LPQ    I+PPL ++    +K ++L   +
Sbjct: 107 MRGGLSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTALLSVI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 167 TVVEVLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 218


>gi|260221297|emb|CBA29721.1| Histidine transport system permease protein hisM [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 237

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 92/227 (40%), Gaps = 6/227 (2%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +    + L      + T   +   S  +G VL+L    L+        + +   Y  T++
Sbjct: 5   VIFEPQNLQLYITGIYTTLGLLASSLAIGAVLALI-FALALTSRWAILRWVVGSY--TYV 61

Query: 229 IFGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           I G P L+ + L Y      +       +    +     F    +A S  TA + AE++ 
Sbjct: 62  IRGTPLLIQVYLIYYGLGQLEWIQARWDDVWPWTHFKEPFFCALLAFSLNTAGYTAEMLA 121

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-G 345
             +     G++EAA A G++  +A R ++LP A+R  +P  +++ + +L+++SLA AV  
Sbjct: 122 GAIRETAAGELEAAQAYGMSRFQAMRRIVLPSALRRTLPAYSNEVVMMLQSTSLASAVPS 181

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             D+ +    + +      E  +    IYL  S  +           
Sbjct: 182 MLDVTAAASRVYSDYYLPFEAYIAAAAIYLVASFCLIGVFRMAEKHF 228



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 28/92 (30%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
               + G   T  L  S +    ++  +      S   ++ W+   Y  V R  P L+ +
Sbjct: 12  LQLYITGIYTTLGLLASSLAIGAVLALIFALALTSRWAILRWVVGSYTYVIRGTPLLIQV 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
           + +Y  +  +  I      +            
Sbjct: 72  YLIYYGLGQLEWIQARWDDVWPWTHFKEPFFC 103


>gi|49474413|ref|YP_032455.1| amino acid permease [Bartonella quintana str. Toulouse]
 gi|49239917|emb|CAF26315.1| Amino acid permease [Bartonella quintana str. Toulouse]
          Length = 238

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 13/208 (6%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
           + +F+ +LG++       + R    K    L ++YI       L  ++L           
Sbjct: 44  LTLFATILGLIFGTLL-AMMRLSSMKLLSWLAVIYIIAMRSIPLVMVILWFFV------- 95

Query: 249 PVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHR 308
                  F+ G+++     S  I  + + AA+ AEI+R+G+ +V +GQ  A  ALG+T+ 
Sbjct: 96  ----LLPFLTGTSIGVN-KSALITFTAFEAAYFAEIMRAGINSVSQGQKHAGQALGMTYW 150

Query: 309 KATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL 368
           +   +V+LPQA R ++P   +Q + L ++++L  A+    L++    + N  G   E  +
Sbjct: 151 QNMYIVILPQAFRDMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIVANNFGVKQEAYI 210

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +    Y  +   ++  +  L  KI++  
Sbjct: 211 LAAIFYFVICFTLSQIVLYLQKKISIIR 238



 Score = 42.6 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + + +L     I   I GTL+   RLS+ KL++W+  +Y+   R+IP ++VI +
Sbjct: 33  YILSGLLFSVFLTLFATILGLIFGTLLAMMRLSSMKLLSWLAVIYIIAMRSIPLVMVILW 92

Query: 148 LY 149
            +
Sbjct: 93  FF 94


>gi|89071269|ref|ZP_01158440.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
 gi|89043199|gb|EAR49432.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Oceanicola granulosus HTCC2516]
          Length = 270

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 79/222 (35%), Gaps = 17/222 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +   A   +  F+L   ++L     SR   +             F++ G P  +  
Sbjct: 40  MLWNIYFGAVALLSGFLLANAVALGKASRSRWTRKPA-------EWFVFVVRGSPLFIQF 92

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y           F        +  ++   I L   TAA+  EI    L ++P+G ME
Sbjct: 93  FFAYFAFLSLKSRYPFF----DMFTSAWLGAAIVLFLNTAAYSGEIFYGALRSIPKGDME 148

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSV 352
           AA A GL+     R +  P  +R   P  T++ + L   ++L    GF       D +  
Sbjct: 149 AADAYGLSGWHRFRRITWPTMLRLAWPAYTNEAIFLFHATTLVFFTGFPARQQKGDALYY 208

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                ++T        I    ++++++ I   M  +N ++  
Sbjct: 209 ASYFADKTFNPFVPYPILALYFIAVTLGIIALMGHINRRLNR 250


>gi|288959644|ref|YP_003449985.1| histidine transport system permease protein [Azospirillum sp. B510]
 gi|288911952|dbj|BAI73441.1| histidine transport system permease protein [Azospirillum sp. B510]
          Length = 251

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 89/236 (37%), Gaps = 2/236 (0%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
            +L    F  N       +       + V +F  GI++       ++             
Sbjct: 17  PMLELLSFGPNGWGGQLLMGTAMTVAVAVSAFAFGILVGSLGAS-AKLSQSLALSVAADA 75

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y +T +      LV+  L +  +     +       G      F+   +++   + A+  
Sbjct: 76  Y-TTVVRGIPELLVIYLLFFGGNSMATAIAGVFGYDGRVELDAFIIGMLSVGLISGAYST 134

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E++R  + +VP GQ+EAA A G++     R VL+PQ MR  +P L + +   LK+++L  
Sbjct: 135 EVIRGAVQSVPFGQIEAARACGMSRWLILRRVLVPQTMRFALPGLGNVWQLTLKDTALVS 194

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               A+L+ V     + T            +YL L+ +     +R         ++
Sbjct: 195 VTSLAELMRVSRLAGSATRDYFLFYGAAAVLYLLLTTLSTALFSRAEQVANRGVRR 250


>gi|325293715|ref|YP_004279579.1| ABC transporter transmembrane protein [Agrobacterium sp. H13-3]
 gi|325061568|gb|ADY65259.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 240

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 96/210 (45%), Gaps = 3/210 (1%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             I   ++++GIV+ L A  L +    +    L  LY +         ++++ L Y    
Sbjct: 30  LAISAGAYLIGIVIGL-AGALGKLSGNRPLGLLLNLYTTAIRAV-PELILIVGLYYAGTD 87

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
               L Q   +    V+  F++    L     A++ E++R  ++A+P GQ+EAA A G++
Sbjct: 88  GLNRLLQLAGLPPLEVN-GFVAAVAVLGFVQGAYMTEVLRGAILAIPNGQIEAARAFGMS 146

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R V+LP  + + +P L + +L + K+S+L   VG+ +L          T Q    
Sbjct: 147 PALRFRRVVLPALLPNALPGLANLWLAVTKDSALVAVVGYQELALATRLAGASTKQYFLF 206

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            L    +YL+++++  L  + L  ++   +
Sbjct: 207 FLAAALLYLAITLVSNLVFSLLERRVRRGQ 236



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
           Q + PY     +   +L G  +T  ++    +   +IG     G+LS N+ +  +  +Y 
Sbjct: 9   QLLSPYPPG--WGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYT 66

Query: 134 EVFRNIPPLVVIFFLYKSVL 153
              R +P L++I  LY +  
Sbjct: 67  TAIRAVPELILIVGLYYAGT 86


>gi|89899055|ref|YP_521526.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89343792|gb|ABD67995.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 216

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/126 (36%), Positives = 69/126 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  +ALS   A FI+EIV SG+ AVP GQ+EAA + GLT  +  RLV++PQA R I+
Sbjct: 90  SFTAGALALSNIAACFISEIVASGIRAVPIGQVEAAASAGLTRLQQLRLVVMPQATRMIV 149

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L  Q++ L+K+SS+  A+G  DL   G  I+      + +  +    Y  +   +   
Sbjct: 150 PSLVGQFVLLVKDSSVVSAIGLLDLTRSGWIIVQSVPNGMLVFSVVGIGYFLICYPLLHL 209

Query: 385 MNRLNA 390
             R+  
Sbjct: 210 SRRMEK 215



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 41/75 (54%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   IL G   T  L+F G++  T+IG ++G GR S++KL++ +   Y ++FR  P LV
Sbjct: 13  QYYPVILKGIGVTLALSFIGIVAGTLIGFVLGIGRASSHKLLSLVVGAYTDIFRGTPVLV 72

Query: 144 VIFFLYKSVLSVLPI 158
            +F ++  +      
Sbjct: 73  QVFVVFFILPEAGIE 87


>gi|251781978|ref|YP_002996280.1| ABC transporter permease [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390607|dbj|BAH81066.1| ABC transporter permease protein [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 148

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              +   A + +T+A +AEI+R GL AV  GQ EA ++ G TH +   L++ PQA R ++
Sbjct: 13  SITAGITAFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFTHFQVFCLIIFPQAFRKML 72

Query: 325 PPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIM 380
           P + SQ++ ++K++SL    +   +L      ++ +  +      +  I   +Y  +++ 
Sbjct: 73  PAIISQFVTVIKDTSLLYSVLAIQELFGNSQILMGRYFEPKDVFLLYGIVAGLYFLINMS 132

Query: 381 IALFMNRLNAKIA 393
           I+ F   L  K A
Sbjct: 133 ISQFSRTLAKKWA 145


>gi|322411344|gb|EFY02252.1| hypothetical protein SDD27957_02870 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 215

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 27/211 (12%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S + G +L++      R+ H K    +  +YI                      
Sbjct: 25  LAVIILSTLFGTLLAVM-----RNSHSKPLGMIASIYIEFVR------------------ 61

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P L     I          +   A + +T+A +AEI+R GL AV  GQ EA ++ G T
Sbjct: 62  NVPNLLWIFIIFLVFKMESITAGITAFTVFTSAALAEIIRGGLNAVNHGQTEAGLSQGFT 121

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGGTIINQTGQA-- 363
           H +  RL++ PQA R ++P + SQ++ ++K++SL    +   +L      ++ +  +   
Sbjct: 122 HFQVFRLIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVLAIQELFGNSQILMGRYFEPRD 181

Query: 364 -IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +  I   +Y  +++ I+ F   L  K A
Sbjct: 182 VFLLYGIVAGLYFLINMSISQFSRTLAKKWA 212



 Score = 44.2 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 32/54 (59%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           ++ + +I +T+ GTL+   R S +K +  I  +Y+E  RN+P L+ IF ++   
Sbjct: 23  ISLAVIILSTLFGTLLAVMRNSHSKPLGMIASIYIEFVRNVPNLLWIFIIFLVF 76


>gi|319404434|emb|CBI78037.1| glutamate/aspartate transport system permease protein [Bartonella
           rochalimae ATCC BAA-1498]
          Length = 235

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 104/228 (45%), Gaps = 2/228 (0%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
             +               IF    + G++ S+F T ++  F    G  L ++ +S+  + 
Sbjct: 8   TYSPFNFSEFDFSFFTFDIFCSYILSGLLFSIFLTIVTTVFGLIFGVLLAMMRLSSIKLL 67

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM--SLYIALSCYTAAFIAEIVRSG 288
               ++ I     +     +L  F  +   T +      S  I  + + AA+ AEI+R+G
Sbjct: 68  STLAIIYITAMRSIPLVMVILWFFVLLPLITGTSIGANKSALITFTAFEAAYFAEIIRAG 127

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           ++++ +GQ  A  ALG+T+ +  R+V+LPQA R+++P   +Q + L ++++L  A+    
Sbjct: 128 ILSISQGQKHAGQALGMTYWQNMRIVILPQAFRNMLPVFLTQIIILFQDTTLVYAISGNS 187

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           L++    + N  G   E  ++    Y  +   ++  +  L  KI++  
Sbjct: 188 LLNGFDIVSNNFGVKQEAYILAAIFYFVICFTLSQIVLLLQKKISIIR 235



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 44/87 (50%)

Query: 63  FLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN 122
           F++  + F   +    + +   + + IL G + + +L     +   I G L+   RLS+ 
Sbjct: 5   FINTYSPFNFSEFDFSFFTFDIFCSYILSGLLFSIFLTIVTTVFGLIFGVLLAMMRLSSI 64

Query: 123 KLVAWICRVYVEVFRNIPPLVVIFFLY 149
           KL++ +  +Y+   R+IP ++VI + +
Sbjct: 65  KLLSTLAIIYITAMRSIPLVMVILWFF 91


>gi|308071225|ref|YP_003872830.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
 gi|305860504|gb|ADM72292.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
          Length = 229

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 94/240 (39%), Gaps = 14/240 (5%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTG 216
              +    +          L      M    KI  F+ +  +V+ L     S   + K  
Sbjct: 1   MKIERYAHMNLDWEFIVESLPLYGEAMWLTLKIAFFAILFSLVVGLLC---STVLYYKVR 57

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
               ++     L    P LV +   Y             F        E     + ++  
Sbjct: 58  GISGIVVAYIELSRNTPLLVQLYFLYY-----------GFTKIGLHMSEMTCAIVGMTFL 106

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
              ++AE  R G+ AV + Q E+ ++LGL+  +  R V+LPQA    +P L +  + LLK
Sbjct: 107 GGGYMAEAFRGGMEAVSKTQTESGLSLGLSKIQLARYVILPQAFAISVPSLGANAIFLLK 166

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +S+  A+   DL++V   +I    +  E +++ +  YL L + +++ +  +  K+   E
Sbjct: 167 ETSIVGAIALLDLMNVAKDLIGMYYKTTESLILLVLAYLVLLLPLSILLTWVERKVRYAE 226



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
              T  +AF  ++ + ++G L         + ++ I   Y+E+ RN P LV ++FLY   
Sbjct: 27  MWLTLKIAFFAILFSLVVGLLCSTVLYYKVRGISGIVVAYIELSRNTPLLVQLYFLYYGF 86

Query: 153 LSVLPIPDHSIVLPFGMFL 171
             +            GM  
Sbjct: 87  TKIGLHMSEMTCAIVGMTF 105


>gi|116695744|ref|YP_841320.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
 gi|113530243|emb|CAJ96590.1| ABC-type transporter, permease component [Ralstonia eutropha H16]
          Length = 252

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 89/226 (39%), Gaps = 14/226 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F        L            +   S +LG V+       +        +A    
Sbjct: 1   MNYQFEWTPVLSQLDRFAEGAAMTLALSFGSILLGTVVGTAGAIAAAFGGPWLQRATRA- 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                 I   P L+ + + +           F             +  IA++    A+  
Sbjct: 60  --YVEAIRNTPFLIQLFIIF-----------FGLPTVGLQIDAVTAAVIAMTVNLGAYST 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+GL AV R Q+EAA ALG+T  +  R V L  A   + P LTSQ+  ++  SS+  
Sbjct: 107 EIIRAGLQAVHRSQLEAAAALGMTRWQLIRHVALVPAFEKVYPALTSQFTLMMLTSSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            +   +L +V   + +QT +  E  ++ MF+Y+ L++M+      +
Sbjct: 167 TISVEELTAVASQVDSQTFRTFESYILVMFVYIGLALMLRAIFGLI 212


>gi|107029119|ref|YP_626214.1| amino acid ABC transporter permease [Burkholderia cenocepacia AU
           1054]
 gi|116686987|ref|YP_840234.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia HI2424]
 gi|105898283|gb|ABF81241.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia AU 1054]
 gi|116652702|gb|ABK13341.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia cenocepacia HI2424]
          Length = 222

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 92/211 (43%), Gaps = 14/211 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +       + +I + +FV G+++ +    +  H+   + + +   Y+        P 
Sbjct: 11  QWPYLLAGAWLSLQIAMLAFVFGMLIGVVCASIL-HYGPASLRRVVAAYVMFAT--NTPQ 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   +           F           F ++ I  +    A++ EI R+G  +V R
Sbjct: 68  LVQIFFLF-----------FALPEVGVTLSPFSAVLIGATFNAGAYLCEIQRAGFASVRR 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            ++EAA  LG +  +  R V+ P  ++ + PPL++Q++ +   +S+A   G  +L     
Sbjct: 117 AEIEAAEVLGFSTAQIVRYVIFPHVLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTF 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +QT  +IE   +   +Y++++++    +
Sbjct: 177 NLSSQTYLSIEAFSVAAVMYIAITLIATFAL 207



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   +  +A    +   +IG +  +        +  +   YV    N P LV I
Sbjct: 12  WPYLLAGAWLSLQIAMLAFVFGMLIGVVCASILHYGPASLRRVVAAYVMFATNTPQLVQI 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FFL+ ++  V         +  G   N
Sbjct: 72  FFLFFALPEVGVTLSPFSAVLIGATFN 98


>gi|229817171|ref|ZP_04447453.1| hypothetical protein BIFANG_02430 [Bifidobacterium angulatum DSM
           20098]
 gi|229784960|gb|EEP21074.1| hypothetical protein BIFANG_02430 [Bifidobacterium angulatum DSM
           20098]
          Length = 224

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+   A   + S  +G+++    T  SR           L+ I    I  +P L
Sbjct: 17  LQGLWVTVWIAAVSVIASVPVGLLVGWLMTLKSRVVRV-------LMRIYLDFIRIMPQL 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+ L Y   F +      +  G         +  +    +  A + ++VR  L ++P  
Sbjct: 70  ALLFLAYY-GFARWFDWNLDATG---------ACVLVFILWGGAELGDLVRGALQSIPEI 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A  LGL++ +    V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  
Sbjct: 120 QSESAYVLGLSNWQGFVHVILPQALRRLLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQ 179

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+            I  +  F+Y  +   +++   RL  + A
Sbjct: 180 IIDANRFQYPTGTLWIYGVIFFMYFIVCWPLSIVARRLEKRWA 222



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W+A   +I +  +G LVG      +++V  + R+Y++  R +P L ++F  
Sbjct: 16  LLQGLWVTVWIAAVSVIASVPVGLLVGWLMTLKSRVVRVLMRIYLDFIRIMPQLALLFLA 75

Query: 149 YKSVLSVLPI 158
           Y         
Sbjct: 76  YYGFARWFDW 85


>gi|126731144|ref|ZP_01746952.1| probable permease protein for ABC transporter system for
           amino-acids [Sagittula stellata E-37]
 gi|126708446|gb|EBA07504.1| probable permease protein for ABC transporter system for
           amino-acids [Sagittula stellata E-37]
          Length = 270

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 13/216 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    + +   A       +LG+VL++           ++    P+   +T  I     L
Sbjct: 62  LQAFLMDVAIFAWCAPLIAILGLVLAVARD-------LRSPALTPVRLFATMFIDIFRGL 114

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            +I + Y + F  P LG          +  ++   ++L    AA+ AE++RSG+ ++   
Sbjct: 115 PVILVIYLIGFGVPGLGL-----PRPWNSPYIWGSLSLILVYAAYTAEVLRSGIDSIHES 169

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q  AA++LGL+     R V+LPQA+R +IP   + ++ L K+ +L   +G  ++    G 
Sbjct: 170 QRAAALSLGLSGGDTMRFVILPQAIRRVIPANMNLFIALQKDVALLSFIGPVEIFRQAG- 228

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +           +    I+L+++I    + + L  +
Sbjct: 229 VYKSLLANFTPYVGAALIFLAITIPATRYADHLMNR 264


>gi|262282449|ref|ZP_06060217.1| amino acid permease [Streptococcus sp. 2_1_36FAA]
 gi|262261740|gb|EEY80438.1| amino acid permease [Streptococcus sp. 2_1_36FAA]
          Length = 226

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 18/223 (8%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                     LT+       + SF+LG+V+S+      RH+     + +   YI   L  
Sbjct: 9   YYPLYQQAFFLTLHIAVWGIIGSFLLGLVVSII-----RHYRVPILRQIATAYIE--LSR 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
             P L+ +   Y           F       V        I L     +++AE  RSGL 
Sbjct: 62  NTPLLIQLFFLY-----------FGLPRIGLVLSSEACATIGLIFLGGSYMAESFRSGLE 110

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AV + Q E  +++GLT R+  R V+LPQA    +P  ++  + L+K +S+   V  ADL+
Sbjct: 111 AVSQTQHEIGLSIGLTPRQVFRYVVLPQATAVALPSFSANVIFLIKETSVFSVVALADLM 170

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            V   +I    +    + + +  YL + + I+L    +  ++ 
Sbjct: 171 YVAKDLIGLYYETDIALAMLVLAYLLMLLPISLLFGWIERRLR 213



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 37/79 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + ++    Y       F  T  +A  G+I + ++G +V   R     ++  I   Y+E+ 
Sbjct: 1   MDWSIIEQYYPLYQQAFFLTLHIAVWGIIGSFLLGLVVSIIRHYRVPILRQIATAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P L+ +FFLY  +  +
Sbjct: 61  RNTPLLIQLFFLYFGLPRI 79


>gi|92112289|ref|YP_572217.1| amino acid ABC transporter permease [Chromohalobacter salexigens
           DSM 3043]
 gi|91795379|gb|ABE57518.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Chromohalobacter salexigens DSM 3043]
          Length = 221

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 81/217 (37%), Gaps = 10/217 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             N   L              +  F L IV +          +   G    L      +I
Sbjct: 1   MSNWDILWEARGEFLIGFWRTLEIFGLSIVGAFLIG--CGLLYLLEGSRKRLTMPLRIVI 58

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +  L  + L Y L++  P                + S   AL+ Y   + AEI R   
Sbjct: 59  DAMRMLPFLILVYLLYYGLPTF--------GIRLDAWWSGVGALAVYHGMYFAEIFRGNR 110

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +  P GQ+EAA A G T  K    ++LPQ +    P + +Q +  LK+++  V +   +L
Sbjct: 111 LTFPPGQIEAAKAHGFTKGKMFFRLILPQVIMQTRPLMGNQLIYALKDTAFLVIITVREL 170

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
            +   ++ +      E  ++ +  Y +LS+ + + + 
Sbjct: 171 TAAANSLSSTYFIPTEAFIVVIGFYWALSVAMEIIIK 207


>gi|325062399|gb|ADY66089.1| polar amino acid uptake family ABC transporter, permease protein
           [Agrobacterium sp. H13-3]
          Length = 270

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 14/238 (5%)

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
               +     +L  G            L +  +      +  LG V+ L     S     
Sbjct: 37  HWNRVAVRLPLLLTGSGSGWPISGGFILNILLSIASMAVATTLGTVMGLATLAKSPFIR- 95

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
                LP  ++  FL      ++L A+ Y L F      +    G     P F+   I L
Sbjct: 96  -----LPAFFVMNFLRNSPWLVLLFAMLYILPF------EMKIFGFVVPFPPFVKAVIGL 144

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  TAA  +E++R  + ++  GQ EA+ +LG T  +  R V+LPQA+R +IP   + Y  
Sbjct: 145 ALPTAANFSEVIRGAVQSIHSGQWEASRSLGYTQLQIYRYVILPQALRRMIPGWMNLYAL 204

Query: 334 LLKNSSLAVAVGFADLVSV--GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           L+  ++LA   G  D++++      +      +   L  +F++ +    IA+F  RL 
Sbjct: 205 LMIATALATVTGIQDVLTILNTSLAMESERALVYFYLTILFLFFAYCYPIAIFARRLE 262


>gi|319942093|ref|ZP_08016412.1| hypothetical protein HMPREF9464_01631 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804477|gb|EFW01355.1| hypothetical protein HMPREF9464_01631 [Sutterella wadsworthensis
           3_1_45B]
          Length = 225

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 22/239 (9%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK 217
           + D  I + F    +   L     T+  +      S  LGI+L +F             +
Sbjct: 1   MQDSGINVFFQGINSLLLLKGLWTTLHISLLSAGLSIPLGILLGIFM-----TLKNPIAR 55

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
            +  +Y+    I        + L + ++F       +N          + S  I  + + 
Sbjct: 56  VVSRIYLEIVRIMP-----QLVLLFVVYFGFTRAFGWNL-------SAYWSAIIVFTFWG 103

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
              + ++VR  LI++P+ Q E+A  LGL+  +  RLV+LPQA+R +IPP  +    ++K 
Sbjct: 104 TGEMGDLVRGALISIPKTQYESAQVLGLSKLQTMRLVVLPQAVRQLIPPSINLITRMIKT 163

Query: 338 SSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +SL V +G  +++  G  II+         A+ +      +Y      ++L    L  K
Sbjct: 164 TSLVVLIGIVEVLKTGQQIIDANRFEYPTAALWVYGAVFLLYFLACWPVSLAAKALEKK 222



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++      +  +G L+G      N +   + R+Y+E+ R +P LV++F +
Sbjct: 18  LLKGLWTTLHISLLSAGLSIPLGILLGIFMTLKNPIARVVSRIYLEIVRIMPQLVLLFVV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y            +      +F   
Sbjct: 78  YFGFTRAFGWNLSAYWSAIIVFTFW 102


>gi|207739614|ref|YP_002258007.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|206592994|emb|CAQ59900.1| amino acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 239

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 8/223 (3%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLF------ATRLSRHFHEKTGKALPLLYISTFL 228
            L    +T+  +A        +G++L+           L         +  PLL    F 
Sbjct: 1   MLEGFGMTLLVSAASIAGGLAIGLLLTALRAGGRPWLALPARALVAFLRKTPLLVQLFFW 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            FG   L+   +   L     +      +   +   EF++    ++ Y  AF +E +R+G
Sbjct: 61  YFGAAQLLGEDVVGALSGLGGLALGGWRLPAPSF--EFLATAFGIALYAGAFCSEELRAG 118

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP GQ+ AA++LG T R A   ++LPQA+R    PL  Q  N LKN+SLA+ +G A+
Sbjct: 119 IRAVPHGQLNAALSLGFTPRAAFVRIVLPQALRVAALPLLGQCANTLKNTSLAMGIGLAE 178

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L      +   +  A +   +   +Y ++ +++   +  L  +
Sbjct: 179 LSYSARQVETDSLLAFQAFAVATLLYAAVILLLQWAVPVLLRR 221



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 41/113 (36%), Gaps = 1/113 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  ++ + +     IG L+ A R      +A   R  V   R  P LV +FF 
Sbjct: 1   MLEGFGMTLLVSAASIAGGLAIGLLLTALRAGGRPWLALPARALVAFLRKTPLLVQLFFW 60

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           Y     +L   D    L     L   G   P  + +  A  F  +   G   S
Sbjct: 61  YFGAAQLLGE-DVVGALSGLGGLALGGWRLPAPSFEFLATAFGIALYAGAFCS 112


>gi|21224121|ref|NP_629900.1| glutamate permease [Streptomyces coelicolor A3(2)]
 gi|289768688|ref|ZP_06528066.1| glutamate permease [Streptomyces lividans TK24]
 gi|2687340|emb|CAA15881.1| glutamate permease [Streptomyces coelicolor A3(2)]
 gi|289698887|gb|EFD66316.1| glutamate permease [Streptomyces lividans TK24]
          Length = 222

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 21/237 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKAL 219
            F    +   L     T+   A   V S + G +L+          R     +  T + +
Sbjct: 1   MFDFLQDYDLLGAFWTTVQLAALSAVGSLIWGTILAAMRVGPVPLMRGLGAAYVNTVRNI 60

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  I  F   GL   + + L                 G S  +  F    + L  YT+A
Sbjct: 61  PLTVIILFASLGLNQTLGVTLG---------------GGDSFETINFRLAVLGLVLYTSA 105

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+ E +RSG+  VP GQ EAA A+GL+  +  RLV+LPQA RS + PL +  + L+KN++
Sbjct: 106 FVCEALRSGINTVPVGQAEAARAIGLSFGQVLRLVVLPQAFRSTVGPLANVLIALIKNTT 165

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +A A+G A+  ++   +I    Q + I  I    ++ L++   L +  +  K+A+K 
Sbjct: 166 VAAAIGVAEAAALMKDMIENEAQLLLISAIIAVGFVILTLPTGLILGWVGKKVAVKR 222



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  LA    + + I GT++ A R+    L+  +   YV   RNIP  V+I F 
Sbjct: 10  LLGAFWTTVQLAALSAVGSLIWGTILAAMRVGPVPLMRGLGAAYVNTVRNIPLTVIILFA 69

Query: 149 YKSVLSV 155
              +   
Sbjct: 70  SLGLNQT 76


>gi|269127496|ref|YP_003300866.1| polar amino acid ABC transporter inner membrane subunit
           [Thermomonospora curvata DSM 43183]
 gi|268312454|gb|ACY98828.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermomonospora curvata DSM 43183]
          Length = 343

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKT------ 215
                 G    N  L     T+   A   V +   GIV  L   RLS H+  +       
Sbjct: 54  WRPFIEGQVWTNLILPGLRNTLGAAAVASVLALAFGIVFGLA--RLSDHWWIRWPAGAVV 111

Query: 216 --GKALPLLYISTFLIFGLPTLVLIA-------LKYQLHFDKPVLGQFNFIGGSTVSPEF 266
              +A+PLL +     F  P +  I        L+  +  +   +       G+   P F
Sbjct: 112 EFFRAIPLLILIFLAFFVPPAISPIIADSPLGNLQRIVVQNVLFVFGVEINAGNVTVPAF 171

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            +L   L  Y  + +AE+VR+G++AVPRGQ EAA ALGL      RLVLLPQA+ +++P 
Sbjct: 172 AALVFGLVMYNGSVLAEVVRAGVLAVPRGQSEAAYALGLRKNAVMRLVLLPQAITAMMPA 231

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFM 385
           + SQ + LLK+++L   + FADL+S G  I+       I   ++   IY+ +++ ++   
Sbjct: 232 VVSQMVVLLKDTALGFVIAFADLLSAGFRIVPANYHNLIPAAIVISIIYIGINMALSYLA 291

Query: 386 NRLNAKIALKEK 397
             L A+     K
Sbjct: 292 TWLEARSRRSRK 303



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 61/181 (33%), Gaps = 19/181 (10%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R  +  + +   L+L  I                       L +R  F   +   P+  
Sbjct: 17  ARRRHAVLTVAAVLVLLGIAYAV----------------YARLQQRGQFA-AELWRPFIE 59

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +   IL G  NT   A    + A   G + G  RLS +  + W     VE FR IP 
Sbjct: 60  GQVWTNLILPGLRNTLGAAAVASVLALAFGIVFGLARLSDHWWIRWPAGAVVEFFRAIPL 119

Query: 142 LVVIFFLYKSVLSVLPIPDHSI--VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV 199
           L++IF  +    ++ PI   S    L   +  N   +    +           + V G+V
Sbjct: 120 LILIFLAFFVPPAISPIIADSPLGNLQRIVVQNVLFVFGVEINAGNVTVPAFAALVFGLV 179

Query: 200 L 200
           +
Sbjct: 180 M 180


>gi|46190817|ref|ZP_00120960.2| COG0765: ABC-type amino acid transport system, permease component
           [Bifidobacterium longum DJO10A]
          Length = 249

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 14/255 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           +VVI    K       + +      + +      L    L +       V   +L  +++
Sbjct: 3   VVVIVIGLKLSPGWPRVKETFFSGEYFVKSFPHVLDGLWLNIRVLLVAVVGVAILSTLIA 62

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           L   R SR       + L L+Y  T ++ G+P +V++   Y + F  P LG F  I  S 
Sbjct: 63  LV--RTSRSPILFPLRILALIY--TTVMRGVPIIVVL---YLIGFGIPGLGLFGRIDPSV 115

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +        IA+    +A+++E++R+G   V   Q  +A +LGLT  + TRL+++PQA+R
Sbjct: 116 L------GTIAVVMGYSAYVSEVLRAGFNDVHPSQRASARSLGLTSGQTTRLIVIPQALR 169

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            + P L + ++++ K+  L   +G  D V      +  T       ++   +++ +S+  
Sbjct: 170 KVAPALMNDFISMQKDVGLISVLGAVDAVRAAQIDVASTYN-FTPYVVASLLFILMSVPF 228

Query: 382 ALFMNRLNAKIALKE 396
            L  +    ++  +E
Sbjct: 229 ILLNDWYTERLRKRE 243


>gi|118468211|ref|YP_889612.1| ectoine/hydroxyectoine ABC transporter permease protein EhuC
           [Mycobacterium smegmatis str. MC2 155]
 gi|118169498|gb|ABK70394.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Mycobacterium smegmatis str. MC2 155]
          Length = 232

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 17/210 (8%)

Query: 187 AKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
           A + +   VLG + +L   F   L         +    + +  F   G   ++ +   + 
Sbjct: 16  AGVTMLYTVLGALAALVVSFVFGLMSLSGSVAARGFSRVVVEFF--RGTSLVIQLLWIF- 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F             +  +A      A+ AE+VR  + +VP  Q EA +AL
Sbjct: 73  ----------FVLPQLGLRFEPMAAATLAFGLNFGAYGAEVVRGAIASVPSTQWEATVAL 122

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL   +  R V+LPQA+  ++PP  + ++ +LK+SSL   +G  +L      +    G +
Sbjct: 123 GLGRFRRMRRVILPQALPEMVPPFGNLWIQILKSSSLLYLIGITELTFEVKQLQFDVG-S 181

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +    I + +Y  L+ ++      + A+ A
Sbjct: 182 MAAFSIALVVYFVLAQVLVAVTRFVEARAA 211



 Score = 43.4 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 3/138 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T      G + A ++  + G   LS +       RV VE FR    ++ + ++
Sbjct: 12  FLQGAGVTMLYTVLGALAALVVSFVFGLMSLSGSVAARGFSRVVVEFFRGTSLVIQLLWI 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +  +    +          LN        +     A   V S      ++L   R  
Sbjct: 72  FFVLPQLGLRFEPMAAATLAFGLNFGAYGAEVVRG---AIASVPSTQWEATVALGLGRFR 128

Query: 209 RHFHEKTGKALPLLYIST 226
           R       +ALP +    
Sbjct: 129 RMRRVILPQALPEMVPPF 146


>gi|317506457|ref|ZP_07964258.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
 gi|316255218|gb|EFV14487.1| inner membrane transporter [Segniliparus rugosus ATCC BAA-974]
          Length = 275

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/253 (21%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           ++      ++                     L     T+ + A   V + ++G  L++  
Sbjct: 37  VWVWRALAVNGQFEAAKWTPFLDHRLWATYLLPGLLGTLLSAAISIVVALLVGTALAVGM 96

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
                    +  +    + +  F    +P L+L+   YQL     V          +   
Sbjct: 97  -----ISDRRLVRTAATVAVEAF--RSVPVLILMIFAYQLFSRYAVFP--------STQV 141

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
              ++   LS Y  A I EI+R+GL A+P+GQ EAA+A+GLT  +  RL+LLPQA+ +++
Sbjct: 142 PLAAVVFGLSVYNGALIGEILRAGLAALPKGQSEAAVAVGLTKGQTVRLILLPQAVAAML 201

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L SQ + +LK+++L   +G+ +L+  G    +        +++   I +++++ +   
Sbjct: 202 PALISQMVVVLKDAALGYQIGYIELIRSGQQAASFYRNFFASLVVVAVIMIAINMALTRL 261

Query: 385 MNRLNAKIALKEK 397
                 ++  K++
Sbjct: 262 ATWAERRLREKKR 274



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R     +  +    L    +W    +  N +                FE  +   P+  
Sbjct: 17  ARARIAILTWVFVAALVGAGVWVWRALAVNGQ----------------FEAAK-WTPFLD 59

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
              +AT +L G + T   A   ++ A ++GT +  G +S  +LV     V VE FR++P 
Sbjct: 60  HRLWATYLLPGLLGTLLSAAISIVVALLVGTALAVGMISDRRLVRTAATVAVEAFRSVPV 119

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMF 170
           L+++ F Y+        P   + L   +F
Sbjct: 120 LILMIFAYQLFSRYAVFPSTQVPLAAVVF 148


>gi|317049449|ref|YP_004117097.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951066|gb|ADU70541.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 269

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 13/232 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE-----KTGKALP 220
              ++     L   ++        F+ +  +GI   + AT L           +   ++P
Sbjct: 37  WRQVWEKLPLLLTGSMHGWPLNGGFILNIFIGIASMVIATVLGLFLGLLMLAKRRWLSIP 96

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
              +  FL      ++L ++ Y L +   +L      G            + LS  TAA 
Sbjct: 97  ARAVMNFLRNAPWLVLLFSMLYLLPYRVELL------GVQFTLSPLFKAIVGLSLPTAAN 150

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AE++R  + +V  GQ E+A +LG +  +  R+V+LPQA+R IIP   + Y  L  +++L
Sbjct: 151 FAEVIRGAVNSVHSGQWESARSLGYSPWQIYRIVILPQALRRIIPGWMNLYALLAISTAL 210

Query: 341 AVAVGFADLVSVGGTIIN--QTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           A   G  ++V++  T +     G  I   +  + ++      IAL   RL  
Sbjct: 211 ATVTGVQEVVTLLRTTLATESEGSLIYFYVTVLLMFFCYCYPIALLARRLEN 262


>gi|15596454|ref|NP_249948.1| amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
 gi|107100706|ref|ZP_01364624.1| hypothetical protein PaerPA_01001733 [Pseudomonas aeruginosa PACS2]
 gi|9947189|gb|AAG04646.1|AE004555_6 amino acid ABC transporter membrane protein [Pseudomonas aeruginosa
           PAO1]
          Length = 214

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 15/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L F      T   I   + ++G +L +    L       +     LL + 
Sbjct: 1   MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRALLPRASLPLAALLDV- 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 +P L+   L          L  F  I G      F    + L  Y AA+ AE+V
Sbjct: 60  ---FRSVPLLIQFVL----------LNSFKSILGLD-WSAFAVACLVLGVYAAAYCAEVV 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+++VP     AA +LGL++R+    ++LP A R   P   +  L+++K++SL + +G
Sbjct: 106 RGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIG 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+    TI+ +  + + ++ I   +Y  +S ++A    RL  +
Sbjct: 166 IVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVARLGARLERR 211


>gi|83748010|ref|ZP_00945040.1| asparagine transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|207738690|ref|YP_002257083.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
 gi|83725312|gb|EAP72460.1| asparagine transport system permease protein [Ralstonia
           solanacearum UW551]
 gi|206592058|emb|CAQ58964.1| amino-acid transmembrane protein [Ralstonia solanacearum IPO1609]
          Length = 223

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A + V    LG +    A   +     +    L   Y++         LV ++     
Sbjct: 21  VTAIVSVIGIPLGGLAGTLA-AYAVQSRSRVLAGLARGYVAMVRNVPYLILVYLSF---- 75

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F        +          + YT  +  EI+R+ L +VPRGQ  AA++LG
Sbjct: 76  ---------FGLPKLGVPASAMAVAIGCTALYTGGYFCEILRAALHSVPRGQSGAALSLG 126

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T    
Sbjct: 127 MSRWQVQRYIVAPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYT 186

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           EI+     IY + S+++A     L   +A + 
Sbjct: 187 EILAATAAIYWASSVLLAAAGRSLE-HLARRR 217



 Score = 44.2 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 9/184 (4%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++  G+    + GTL      S ++++A + R YV + RN+P L++++ 
Sbjct: 14  VLLRGLEVTAIVSVIGIPLGGLAGTLAAYAVQSRSRVLAGLARGYVAMVRNVPYLILVYL 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            +  +  +        V      L   G     L    ++     S   G  LSL  +R 
Sbjct: 74  SFFGLPKLGVPASAMAVAIGCTALYTGGYFCEILRAALHSVPRGQS---GAALSLGMSRW 130

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
               +    + L       FLI    +LV++  K    F    L +  +      +  F 
Sbjct: 131 QVQRYIVAPQLLG------FLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFA 184

Query: 268 SLYI 271
              I
Sbjct: 185 YTEI 188


>gi|332040837|gb|EGI77209.1| polar amino acid ABC transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 223

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 11/218 (5%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              F    +     +   +  LG+V+ +                  +      LI   P 
Sbjct: 13  QWPFLLRGVAWTLGLTAIAMALGLVVGVACAWARTTSARGLLWLRAVTGAYVELIRNTPF 72

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +V +   +   F  P +       G  +SPE  +  +A+     A+ AEI+R+G+ A PR
Sbjct: 73  IVQLFFIF---FGLPSV-------GLRLSPE-AASILAMVLNLGAYSAEIIRAGVQATPR 121

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA++L L   +    V+LP A++ + P L SQ + ++  S++   +   +L     
Sbjct: 122 GQIEAALSLALNRWQVYTRVVLPPALKRVWPALVSQIIIVMLGSAVCGQISTEELSYAAN 181

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            I   + +  E  ++   +YL L+I +   ++ +  + 
Sbjct: 182 VISAASFRTFESYIVVTAVYLLLAIALRRLLHWVGPRF 219


>gi|238785181|ref|ZP_04629174.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
 gi|238713929|gb|EEQ05948.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
          Length = 240

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 2/208 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S + G++L+L    + + F  +    L       F    L   L+LI     
Sbjct: 26  MTAKLFLLSVLPGMLLALL-MAVGQAFGPRPLSWLIRSISYFFRSTPLYLQLMLIYYGLS 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   ++  PR +  A  A 
Sbjct: 85  QFDIVQLGWQEDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVAGEAF 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V  +    T   
Sbjct: 145 GMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARSFYASTYSP 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
               L+   +YL  + M+    +R   +
Sbjct: 205 FIPFLMAAALYLLCTFMLIFLFSRAERR 232



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 2/146 (1%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  L    ++P  ++  L+  G+    + ++W+ R     FR+ P  + +  +Y  
Sbjct: 23  GLAMTAKLFLLSVLPGMLLALLMAVGQAFGPRPLSWLIRSISYFFRSTPLYLQLMLIYYG 82

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR-- 209
           +     +            L        TL +  N   +V   + G++++          
Sbjct: 83  LSQFDIVQLGWQEDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVAGE 142

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTL 235
            F     + +  L +   L  G+P L
Sbjct: 143 AFGMSQWQIIRRLVLPATLRRGIPAL 168


>gi|329116585|ref|ZP_08245302.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus parauberis NCFD 2020]
 gi|326906990|gb|EGE53904.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus parauberis NCFD 2020]
          Length = 215

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 100/224 (44%), Gaps = 27/224 (12%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L    LT+  +    + S + G +L++     ++ F   +G       I    +  +P
Sbjct: 12  FILKGFALTLYISFVSIILSTIFGTILAIMRNGKNKLFKVISG-------IYIEFVRNVP 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I + + +   K                   +   + + +T+A +AEIVR GL  V 
Sbjct: 65  NLLWIFIIFLVFQMKSTP----------------AGITSFTVFTSAALAEIVRGGLNGVD 108

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSV 352
            GQ EA ++ GL   +   L++ PQA+R ++P + SQ++ ++K++SL    +   +L   
Sbjct: 109 NGQTEAGLSQGLKPSQVFLLIVFPQAIRKMLPAIISQFVTVIKDTSLLYSVIAIQELFGK 168

Query: 353 GGTIINQTGQAIEIILIWMF---IYLSLSIMIALFMNRLNAKIA 393
              ++ +  QA E+  ++     IY  ++ +I+    RL  K A
Sbjct: 169 SQILMGKFFQAKEVFALYALVTGIYFIINFIISTLSRRLAKKWA 212



 Score = 51.5 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 39/71 (54%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +  T IL GF  T +++F  +I +TI GT++   R   NKL   I  +Y+E  RN+P 
Sbjct: 6   SGANLTFILKGFALTLYISFVSIILSTIFGTILAIMRNGKNKLFKVISGIYIEFVRNVPN 65

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 66  LLWIFIIFLVF 76


>gi|269127495|ref|YP_003300865.1| polar amino acid ABC transporter inner membrane subunit
           [Thermomonospora curvata DSM 43183]
 gi|268312453|gb|ACY98827.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermomonospora curvata DSM 43183]
          Length = 228

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 8/225 (3%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L           +I V + VL ++   F   L R       +    + ++T     L
Sbjct: 11  FDNLDLILGGFWATIRIAVVTAVLSLIFGTFLAAL-RVSPVPVLRHTGGVVVNTLRNTPL 69

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             ++ I +   +  +  +  +     G      +    + LS YT+AF+ E +RSG+  V
Sbjct: 70  TLVLAICI---MAVNDTLQVRLAAAEGVN---RYWWGVLGLSIYTSAFVCEALRSGINTV 123

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVS 351
           P GQ EAA ++GLT  ++ RLV+LPQA R++I PL S  + ++KN+++  AV +  D  +
Sbjct: 124 PIGQAEAARSIGLTFTQSLRLVILPQAFRAVIAPLGSVMIAMIKNTTVVGAVAYGRDAAA 183

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           V   + +  G +I I +     Y+ L++    F   L  ++A+  
Sbjct: 184 VMKDMFDDLGASIPIFVGIAIGYMILTLPTGFFFGWLAKRMAVAR 228



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 41/113 (36%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ +         IL GF  T  +A    + + I GT + A R+S   ++     V V  
Sbjct: 4   LLDFGPVFDNLDLILGGFWATIRIAVVTAVLSLIFGTFLAALRVSPVPVLRHTGGVVVNT 63

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            RN P  +V+     +V   L +   +       +    GLS  T      A 
Sbjct: 64  LRNTPLTLVLAICIMAVNDTLQVRLAAAEGVNRYWWGVLGLSIYTSAFVCEAL 116


>gi|256832815|ref|YP_003161542.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
 gi|256686346|gb|ACV09239.1| polar amino acid ABC transporter, inner membrane subunit [Jonesia
           denitrificans DSM 20603]
          Length = 313

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 120/258 (46%), Gaps = 16/258 (6%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           +   ++++   +   +     +    L       N  +     T+   A     + VLG 
Sbjct: 29  LAVALLVWMGIQLHNAGQLRGELWAPLVEASAWQNFLIPGLINTLVAAALSIAAATVLGT 88

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +  +      R  +    +    + +  F    +P L+++   + L      + + +   
Sbjct: 89  LFGV-----GRLANSVVVRWTCGIIVEFF--RAVPVLIMMVAGWVLFSRVDAIPRSD--- 138

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                   +++ +AL+ Y  A IAE+VRSG+  +P GQ EAA+A+G+T  ++ R V LPQ
Sbjct: 139 -----APLVAVVVALTLYNGAVIAELVRSGVHGLPSGQREAALAVGMTRGQSIRSVELPQ 193

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI-EIILIWMFIYLSL 377
           A+ +++P L SQ++ +LK+S+L   V + +L+     + +++   I +++L+   +++ +
Sbjct: 194 ALLAMLPSLVSQFVVILKDSALGQIVTYPELLRQARLLGSRSPMPILQVMLLAAVLFVLI 253

Query: 378 SIMIALFMNRLNAKIALK 395
           +  ++       ++++ +
Sbjct: 254 NYALSKCAELAASRVSSR 271



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 92/259 (35%), Gaps = 27/259 (10%)

Query: 22  MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTS 81
            R   ++  I+ ALL   + +W    ++N  +                    +   P   
Sbjct: 15  ARARIVAANIVGALLAVALLVWMGIQLHNAGQLRG-----------------ELWAPLVE 57

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            S++   ++ G +NT   A   +  AT++GTL G GRL+ + +V W C + VE FR +P 
Sbjct: 58  ASAWQNFLIPGLINTLVAAALSIAAATVLGTLFGVGRLANSVVVRWTCGIIVEFFRAVPV 117

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGM----FLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           L+++   +     V  IP     L   +      N   ++    +             L 
Sbjct: 118 LIMMVAGWVLFSRVDAIPRSDAPLVAVVVALTLYNGAVIAELVRSGVHGLPSGQREAALA 177

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           + ++   +  S    +     LP L     +I     L  I    +L      L Q   +
Sbjct: 178 VGMTRGQSIRSVELPQALLAMLPSLVSQFVVILKDSALGQIVTYPEL------LRQARLL 231

Query: 258 GGSTVSPEFMSLYIALSCY 276
           G  +  P    + +A   +
Sbjct: 232 GSRSPMPILQVMLLAAVLF 250


>gi|325293913|ref|YP_004279777.1| nopaline ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
 gi|325061766|gb|ADY65457.1| nopaline ABC transporter membrane spanning protein [Agrobacterium
           sp. H13-3]
          Length = 235

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 2/227 (0%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               +    +   A       V  +V +L  T        +      ++   T L+ G+P
Sbjct: 9   WQGGWIRAILQGAAITIAVGTVSMLVGALIGTLCGVIKWARIFPLTLVVDAYTSLVRGVP 68

Query: 234 TLVLIALKYQ--LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            L++I L +   + F   V   F +   +     F+   IA+     A+  E++R  L +
Sbjct: 69  ELLIIYLLFFSSVQFVTQVATAFGYAALADSGYAFIIAIIAIGTIAGAYSTEVIRGALAS 128

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P G +EAA ALG+  R+  R +++PQ +R  IP + + +   +K+++L   VG  +L+ 
Sbjct: 129 IPTGHIEAARALGIPGRRIFRRIIIPQMLRIAIPGMNNVWQTTIKDTALVSVVGLQELMR 188

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                   T   +   LI   +Y +++I+     +R+   + L+ +K
Sbjct: 189 AASVGAGSTRNPLIFFLIAAVVYFAITIISQAGFDRVERLVRLRARK 235


>gi|315640930|ref|ZP_07896026.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315483348|gb|EFU73848.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 236

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 7/237 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L   +  + T   +   S V+GI   L    L+R +  K    +   + 
Sbjct: 1   MSFDFSTMINSLKIASHYIGTTLFMAGSSLVIGIFFGLLI-ALARQYKIKV---IAPFFQ 56

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAFI 281
               +     +VLI L   L   K        +  S    +F        ALS  +    
Sbjct: 57  VFITLLKGIPIVLIILASYLIASKKFDDLAEAMHWSVRFKDFNMIWIAIFALSILSIINS 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI R    ++ +GQ +AA +LG+T  +  R VLLPQA    +P  ++  + L+K S+LA
Sbjct: 117 SEIFRGAFSSIKKGQFDAAKSLGMTSFQTIRRVLLPQAFPVSVPMFSNLLITLIKASALA 176

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             V   D+ +       Q  + +E  +    IY  +SI+I         ++  K ++
Sbjct: 177 SMVSVVDVFAAAKISAQQNYRFLEAYVAVAIIYWVISIIIEKCAQLFEQRMNRKLRR 233


>gi|303253106|ref|ZP_07339255.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302647788|gb|EFL77995.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
          Length = 225

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 92/235 (39%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              +        +  +     +   A+I   S  L ++       L R  +    +A+  
Sbjct: 1   MQNMGVDWLFEGQNTARLAQGLWLTARISFISVGLSLIFGTLFGLLMRA-NNVFVRAVCR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+ T  I       ++   + ++F        +  G       F       + +  A +
Sbjct: 60  FYLETIRIVP-----ILVWLFAIYFGLSTWFNLHISG-------FWVCIWVFTLWGVAEM 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++K SSLA
Sbjct: 108 GDLVRGALASIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPGAINLFTRMVKTSSLA 167

Query: 342 VAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +G  ++V VG  II          +  +  +   +Y  +   ++LF  RL  K
Sbjct: 168 ALIGVIEMVKVGQQIIENALLTNPSASFFVYGLIFILYFLICYPLSLFATRLEHK 222



 Score = 41.1 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  + I GTL G    + N  V  +CR Y+E  R +P LV +F +
Sbjct: 18  LAQGLWLTARISFISVGLSLIFGTLFGLLMRANNVFVRAVCRFYLETIRIVPILVWLFAI 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  + +   +      +   +F          L     A I
Sbjct: 78  YFGLSTWFNLHISGFWVCIWVFTLWGVAEMGDLVRGALASI 118


>gi|288905473|ref|YP_003430695.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|288732199|emb|CBI13764.1| putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
          Length = 226

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 3/208 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L    +LF   L R +  K      ++Y++         L+L      
Sbjct: 18  PVTLGIMVVSILLSFFPALFL-ALGRIYKVKGVTGFSVIYLAFIRSTPAILLILFFYSLF 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +L    F             YI     T   ++EI+RS ++ V +GQ+E A A+
Sbjct: 77  PSLINQLLKATGF--NIFDINPIYYAYIIFGLMTTGSLSEIIRSAILTVDKGQLEVAQAI 134

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +A   ++ PQA+R  +P L +  +NL+K +SL   +   D+ ++           
Sbjct: 135 GLSTSQAYIRIVFPQAIRQALPNLCNLVINLVKGTSLVFVMTVKDITAIAKIEAAYGYHY 194

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
            E   +   IY+ +  +I      L  +
Sbjct: 195 FESYFVIFIIYIVICGLIQYGFKFLEKR 222



 Score = 37.6 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ +      +  GR+   K V     +Y+   R+ P +++I F Y
Sbjct: 14  LSGIPVTLGIMVVSILLSFFPALFLALGRIYKVKGVTGFSVIYLAFIRSTPAILLILFFY 73

Query: 150 KSVLSV 155
               S+
Sbjct: 74  SLFPSL 79


>gi|296111385|ref|YP_003621767.1| putative amino acid ABC transporter, permease protein [Leuconostoc
           kimchii IMSNU 11154]
 gi|295832917|gb|ADG40798.1| putative amino acid ABC transporter, permease protein [Leuconostoc
           kimchii IMSNU 11154]
          Length = 240

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 107/237 (45%), Gaps = 12/237 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F + +    L +  +T+       +FS +LG +++       +      G+ +  
Sbjct: 3   PFSFKFLISVFGEVLPYLPVTLLVIIVSAIFSTLLGTLIA-----RGQLSQSAIGRTISH 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+  F++   P +VL+ L +   +  P L             + + + IALS   A+ +
Sbjct: 58  SYV--FVLRSTPPIVLLFLVF---YGLPKLLLLTLNININDWQKSIFVVIALSLLFASNL 112

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ +S  ++V  GQ EAA+ +GL+  ++   V LPQ +   +P   +    L+K+++LA
Sbjct: 113 AEVFKSAYLSVDGGQREAALMVGLSEWQSFYRVTLPQTIVVALPNFANTIAALIKDAALA 172

Query: 342 VAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G  D++  G  +I++     A+E  L    IY  + I++      L   ++ ++
Sbjct: 173 YVIGLVDMMGAGDNLISRNFGHHALETYLALAIIYWIIFIIVEQGTKYLEKHLSKRQ 229



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           T  +     I +T++GTL+  G+LS + +   I   YV V R+ PP+V++F ++  
Sbjct: 23  TLLVIIVSAIFSTLLGTLIARGQLSQSAIGRTISHSYVFVLRSTPPIVLLFLVFYG 78


>gi|227514604|ref|ZP_03944653.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus fermentum ATCC 14931]
 gi|227087015|gb|EEI22327.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus fermentum ATCC 14931]
          Length = 223

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +  I V S   G+++      L R    +  + +  LY+  F I  +PT+VL+ L Y 
Sbjct: 23  WVSVWIAVVSLFFGLIVGTVFGVL-RTTKSRVLRFILRLYLEIFRI--IPTVVLLFLVYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +                   P      +A S + AA  ++IVR  + +VPR Q E+ +A+
Sbjct: 80  I----------LPRQLHINMPADWMAVLAFSLWVAAEFSDIVRGAIQSVPRHQRESGLAI 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R +LLPQAM+  +P   +    ++K +SL + +   D+++VG  II      
Sbjct: 130 GLTRFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNST 189

Query: 364 IE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +  F+Y  +  +++L+  +L A+
Sbjct: 190 YPTGVFWVYGLIFFLYFIIDYLLSLWARKLTAR 222



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 45/85 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +    I+GT+ G  R + ++++ +I R+Y+E+FR IP +V++F +
Sbjct: 18  LMGGLWVSVWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPTVVLLFLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +   L I   +  +    F   
Sbjct: 78  YYILPRQLHINMPADWMAVLAFSLW 102


>gi|218510403|ref|ZP_03508281.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 209

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 86/210 (40%), Gaps = 14/210 (6%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
              F   +                 I   +  +G  + L    L R          P ++
Sbjct: 14  SYQFDFSVIFDAWPRLLYGCWLTLAISTKAMAMGFAIGLLCVALRRTGFG------PFVW 67

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           +    I  +         + ++   P +       G  ++P+  +  +AL     A+ AE
Sbjct: 68  LVKGFIEIIRNTPFPVQAFFIYLGLPSI-------GIRLAPD-AAAVVALGLNGGAYAAE 119

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I+R G+ ++ +GQ+EA  ALGL   +  R ++L  A+R   P L SQ++ L+  SS+  +
Sbjct: 120 IIRGGVESIHKGQVEAGRALGLNGFQVFRYIILRPALRVSFPALASQFILLMLTSSVVAS 179

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +   +L S+G  + + + ++ E+ L    +
Sbjct: 180 ISAMELASIGQELESTSFRSFEVYLTLTGL 209


>gi|326333230|ref|ZP_08199477.1| glutamate permease [Nocardioidaceae bacterium Broad-1]
 gi|325948874|gb|EGD40967.1| glutamate permease [Nocardioidaceae bacterium Broad-1]
          Length = 229

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 17/213 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +FS +LG+VL+ F     R       + +    + TF    L  ++   L     F    
Sbjct: 27  IFSLLLGVVLATF-----RVSPVPVLRWIGSAVVYTFRNTPLTLVMFFTL-----FGLSY 76

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
               +F         F    +ALS YT+ F+ E++RSG+  VP GQ EAA A+GLT  + 
Sbjct: 77  QLGVSFDKELLYRNNFWLAVLALSVYTSTFVCEVLRSGINTVPLGQAEAARAIGLTFTQN 136

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTG-QA 363
            RL++LPQA+RS+I PL S  + + KN+++AV +G        +      +++ +   Q 
Sbjct: 137 LRLIVLPQALRSVINPLASVLIAMTKNTTVAVTIGVTTATMVNEASGQMKSLMERNSDQI 196

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + I +I+   ++ L++ I         + A+  
Sbjct: 197 LLIFIIFAVGFMILTLPIGFVAGWAAKRFAVIR 229



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            + IL  F  T  LA    I + ++G ++   R+S   ++ WI    V  FRN P  +V+
Sbjct: 8   GSVILTSFGLTLRLAIFSGIFSLLLGVVLATFRVSPVPVLRWIGSAVVYTFRNTPLTLVM 67

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFL 171
           FF    +   L +     +L    F 
Sbjct: 68  FFTLFGLSYQLGVSFDKELLYRNNFW 93


>gi|260761547|ref|ZP_05873890.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|260671979|gb|EEX58800.1| LOW QUALITY PROTEIN: polar amino acid ABC transporter [Brucella
           abortus bv. 2 str. 86/8/59]
          Length = 292

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/100 (54%), Positives = 73/100 (73%)

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            LI GLP L LIA  + + FD P LG FN  GG+ + PEF++L++ALS YTA+FIAE VR
Sbjct: 147 ALIIGLPILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALFLALSFYTASFIAETVR 206

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
           +G++ V +GQ EAA A+GL   +  RL+++PQA+R IIPP
Sbjct: 207 AGVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPP 246


>gi|298290178|ref|YP_003692117.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926689|gb|ADH87498.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 220

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 15/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      R L           +I V S +LG+  ++    ++     +  +AL   
Sbjct: 1   MHYTFHWLPAFRALPDMLWGALVTLEIAVLSMLLGVFFAVLL-AVASGSQYRALRALAST 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           ++   L    P L  I + Y           F           F +L   ++   A ++A
Sbjct: 60  WVE--LARNTPALFQIYMAY-----------FGLGSLGIHLDSFPALLAGITFNNAGYLA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R GL AVP  Q+ AA +LG+   +A RL+++PQ  R +  P+T+Q +  +  +SL V
Sbjct: 107 ETFRGGLRAVPPTQVRAARSLGMGQIQAFRLIVMPQMFRVVFYPMTNQMVWAILMTSLGV 166

Query: 343 AVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            VG   DL  V   +  ++ +  E   +   IY  L+ ++ L    +  ++
Sbjct: 167 IVGLNNDLTGVTQELNVRSFRTFEYFALAAVIYYLLAKLVTLSARLMAWRL 217



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 38/99 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   M+       L+     S  + +  +   +VE+ RN P L  I+  
Sbjct: 17  MLWGALVTLEIAVLSMLLGVFFAVLLAVASGSQYRALRALASTWVELARNTPALFQIYMA 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  + S+    D    L  G+  NN G    T      A
Sbjct: 77  YFGLGSLGIHLDSFPALLAGITFNNAGYLAETFRGGLRA 115


>gi|317472313|ref|ZP_07931641.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes
           sp. 3_2_56FAA]
 gi|316900270|gb|EFV22256.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes
           sp. 3_2_56FAA]
          Length = 219

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 14/225 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                  R +      M     I     VL +V+  F   + R++       +  +YI  
Sbjct: 1   MDWLFIERNIPLYIEAMKLTLGIGALGVVLSVVIG-FLCSMVRYYRVPVLNRIVGIYIE- 58

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
            L    P L+ +   Y                       F+   I L+   A++++E  R
Sbjct: 59  -LSRNTPLLIQLFFLYY-----------GLPKIGIKLNAFVIAVIGLTFLGASYMSEAFR 106

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            GL AV + Q E+ +++GLT  +  R ++LPQA+   +P + +  + LLK +S+  A+  
Sbjct: 107 GGLEAVNKIQEESGLSIGLTKPQLMRYIILPQALAIAMPSVGANVIFLLKETSVFSAIAL 166

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ADL+ V   +I    +  E + + +  YL + + I++  + L  K
Sbjct: 167 ADLMFVAKDLIGMYYKTNEALFMLVVAYLIILLPISIIFSVLERK 211



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 37/92 (40%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +   G++ + +IG L    R     ++  I  +Y+E+ RN P L+ +FFLY  +  +
Sbjct: 20  TLGIGALGVVLSVVIGFLCSMVRYYRVPVLNRIVGIYIELSRNTPLLIQLFFLYYGLPKI 79

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
               +  ++   G+                 A
Sbjct: 80  GIKLNAFVIAVIGLTFLGASYMSEAFRGGLEA 111


>gi|330861765|emb|CBX71939.1| hypothetical protein YEW_AJ02060 [Yersinia enterocolitica W22703]
          Length = 119

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/113 (38%), Positives = 70/113 (61%)

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           AFIAE +RSG+  V +GQ  AA ALGLT  +A R V+LPQA++  +PPL  QY+N++KNS
Sbjct: 1   AFIAEELRSGISGVAKGQKYAAHALGLTGWQAMRHVVLPQALKIAMPPLLGQYMNIIKNS 60

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           SLA+A+G A+L      +  +T +  +   +   +Y+++  +I  +      +
Sbjct: 61  SLAMAIGVAELSYASRQVETETLRTFQAFGVATVLYIAIIALIEAWGMWRQQR 113


>gi|239982049|ref|ZP_04704573.1| amino acid ABC transporter transmembrane protein [Streptomyces
           albus J1074]
 gi|291453901|ref|ZP_06593291.1| amino acid ABC transporter integral membrane protein [Streptomyces
           albus J1074]
 gi|291356850|gb|EFE83752.1| amino acid ABC transporter integral membrane protein [Streptomyces
           albus J1074]
          Length = 216

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 87/221 (39%), Gaps = 18/221 (8%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
           +           R      +T+       + SF LG+V ++     +R            
Sbjct: 2   NWDWSAVADFMPRFWDGVLVTLQATVIGSLISFTLGLVWAIAFRAPTR------------ 49

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                  +    T+V   ++      +     F             +  IA+  + + + 
Sbjct: 50  ------FVRWPVTIVTEFIRNTPLLVQLFFLFFVLPEWGIQFSALTTGIIAIGLHYSTYT 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           A++ R+G+ AVP GQ EAA AL L  R+    V+LPQA+R ++P L +  +++LK++ L 
Sbjct: 104 AQVYRAGIDAVPVGQWEAATALSLPARRTWTAVILPQAIRRVVPALGNYVVSMLKDTPLL 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
             +G  +++         T Q  E + +    ++ ++   +
Sbjct: 164 AGIGVLEMLQQSRLEGAATFQYTEPLTVVGIAFILIAYPAS 204



 Score = 36.8 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 26/73 (35%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T      G + +  +G +      +  + V W   +  E  RN P LV +FFL
Sbjct: 15  FWDGVLVTLQATVIGSLISFTLGLVWAIAFRAPTRFVRWPVTIVTEFIRNTPLLVQLFFL 74

Query: 149 YKSVLSVLPIPDH 161
           +  +         
Sbjct: 75  FFVLPEWGIQFSA 87


>gi|260462848|ref|ZP_05811053.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
 gi|259031492|gb|EEW32763.1| binding-protein-dependent transport systems inner membrane
           component [Mesorhizobium opportunistum WSM2075]
          Length = 202

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 72/170 (42%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL + T ++  +P LVLI L Y    D                    +    L     A+
Sbjct: 20  LLAVYTTVVRAVPELVLILLLYYAGTDLINQALTAMGYQRVDISGLAAGIAVLGFVQGAY 79

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E++R  ++A+P+GQ+EAA A G++     R + LP  +   IP L + +L   K+++L
Sbjct: 80  STEVIRGAILAIPQGQIEAARAYGMSPGLMLRRITLPAMLPFAIPGLANLWLIATKDTAL 139

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              VGF +L          T            +YL LS++    + R+ A
Sbjct: 140 LAVVGFYELALATRQAAGVTKAYFTFFFAAAVLYLLLSLISNFLIGRVEA 189


>gi|170734710|ref|YP_001773824.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
 gi|169820748|gb|ACA95329.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia cenocepacia MC0-3]
          Length = 222

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 92/211 (43%), Gaps = 14/211 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
              +       + +I + +FV G+++ +    +  H+   + + +   Y+        P 
Sbjct: 11  QWPYLLAGAWLSLQIAMLAFVFGMLIGVVCASIL-HYGPASLRRVVAAYVMFAT--NTPQ 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV I   +           F           F ++ I  +    A++ EI R+G  +V +
Sbjct: 68  LVQIFFLF-----------FALPEVGVTLSPFSAVLIGATFNAGAYLCEIQRAGFASVRQ 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            ++EAA  LG +  +  R V+ P  ++ + PPL++Q++ +   +S+A   G  +L     
Sbjct: 117 AEIEAAEVLGFSTAQIVRYVIFPHVLKVMFPPLSNQFIMMTLGTSMASVFGVEELTGRTF 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            + +QT  +IE   +   +Y++++++    +
Sbjct: 177 NLSSQTYLSIEAFSVAAVMYIAITLIATFAL 207



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   +  +A    +   +IG +  +        +  +   YV    N P LV I
Sbjct: 12  WPYLLAGAWLSLQIAMLAFVFGMLIGVVCASILHYGPASLRRVVAAYVMFATNTPQLVQI 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FFL+ ++  V         +  G   N
Sbjct: 72  FFLFFALPEVGVTLSPFSAVLIGATFN 98


>gi|91781326|ref|YP_556533.1| branched chain amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693986|gb|ABE37183.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 224

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 100/227 (44%), Gaps = 18/227 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +     T+   A   V S VLG++L++   R           A+ L+ +      
Sbjct: 11  YWPELVQGLGGTIWLCAAGAVMSGVLGVLLTIGQRR----------GAVWLVAMIRGYTA 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               L L+ L Y   F  P            + P  +   + L+ Y   ++AE++++ + 
Sbjct: 61  LTLGLPLLVLLYVTFFVLPEF--------GVLLPAPLIGTVTLAFYYGPYVAEVIQAAIA 112

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP G +EA +A+G++  +  R ++ PQAM  ++P LT   + L+K+S+L   +   + +
Sbjct: 113 AVPAGTIEAGVAIGMSPARIARRIIAPQAMPLLLPTLTGLSIGLVKDSALLSMISVHEFM 172

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                ++++T   +E+  +   +Y + + +I L       ++   ++
Sbjct: 173 FAAKAVVSETYAPLEVYFVVALVYWAATSVIHLSTRHWERRLGRAQR 219


>gi|119387585|ref|YP_918619.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119378160|gb|ABL72923.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 230

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 92/234 (39%), Gaps = 15/234 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
                  F        L           ++ + S VLGI+L++  T + R    +   A+
Sbjct: 8   TAMFNYTFQWKQAMARLPQMLDGAVVTMQVAILSMVLGILLAIILT-MFRLSGIRILSAV 66

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
              ++             +   Y  HF                   F+S+ I ++   A 
Sbjct: 67  AKTWVEIARNTPA-----LFQIYMAHFGLGSF--------GLHLSPFLSILIGITFNNAG 113

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ E  R  L A+P  Q  AA +LG+    A R V+LPQ +R    P+T+Q +  +  +S
Sbjct: 114 YLTENFRGALKAIPDTQTRAARSLGMGAAGAFRHVVLPQMLRISFLPMTNQMVWAILMTS 173

Query: 340 LAVAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L V VG   DL  V   +   T +  E+  +   I+ +++ ++ L    + A++
Sbjct: 174 LGVTVGMNTDLYGVTQDLNALTFRTFELFALAAVIFYAITKIVTLGARLIAARL 227



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +A   M+   ++  ++   RLS  ++++ + + +VE+ RN P L  I+  
Sbjct: 27  MLDGAVVTMQVAILSMVLGILLAIILTMFRLSGIRILSAVAKTWVEIARNTPALFQIYMA 86

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + S        + +  G+  NN G           A 
Sbjct: 87  HFGLGSFGLHLSPFLSILIGITFNNAGYLTENFRGALKAI 126


>gi|87302594|ref|ZP_01085411.1| permease protein of amino acid ABC transporter [Synechococcus sp.
           WH 5701]
 gi|87282938|gb|EAQ74895.1| permease protein of amino acid ABC transporter [Synechococcus sp.
           WH 5701]
          Length = 427

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 30/287 (10%)

Query: 109 IIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG 168
           I G L+    L+ +   +W       + + +P    + +L   VL    +    +     
Sbjct: 161 ITGLLLAMRWLAGHWGRSW----PPRLVKLVPLSWPLLYLLGMVLIAGGLGIPRVPPSEW 216

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
             L    L              + SF +G+V++L      R       +   + YI    
Sbjct: 217 GGLLLTLLMASF--------AILLSFPIGVVVAL-----GRRSSLPLLRWTSVFYIEF-- 261

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P + L+ L   +         +   GG      + + ++ L+ +  A++AE VR+G
Sbjct: 262 IRGAPLITLLFLGQNI-------LGYMLPGGWAPDRVWRAAWV-LTFFCGAYLAEAVRAG 313

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L AVP GQ+EAA +LGL+   A + V+LPQA+R  +P    Q+++LL++++L   +G  D
Sbjct: 314 LSAVPPGQLEAARSLGLSMPLALQRVVLPQALRIALPAAVGQFISLLQDTTLLSLIGLLD 373

Query: 349 LVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L+    T++      G+  E+ L    ++      + L    L  ++
Sbjct: 374 LLGTARTVMANPEFLGKNAEVYLTLAVLFWCCCAALGLGSRALERRL 420


>gi|319408774|emb|CBI82431.1| glutamate/aspartate transport system permease protein [Bartonella
           schoenbuchensis R1]
          Length = 238

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 107/238 (44%), Gaps = 3/238 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL-GIVLSLFATRLSRHFHEKTGKALP 220
                   F      +F              S++L G++ S+F T  +  F    G  L 
Sbjct: 1   MKDFMNSYFWPYLSFNFSDFDFSFFTFDIFLSYILPGLLFSVFLTLFATIFGLIFGILLA 60

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM--SLYIALSCYTA 278
           ++ +S+  +F    ++ I     +     +L  F  +   T +      S  I  + + A
Sbjct: 61  MMRLSSIKLFSSLAVIYITAMRSIPLVMVILWFFVLLPFLTGTSIGANKSALITFTAFEA 120

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+ AEI+R+GL ++P+GQ  A  ALG+T+ +   +VLLPQA R+++P   +Q + L +++
Sbjct: 121 AYFAEIMRAGLSSIPQGQKYAGQALGMTYWQNMYIVLLPQAFRNMLPVFLTQVIILFQDT 180

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +L  A+    L++    + N  G   E  ++    Y ++   ++  +  L  KI++  
Sbjct: 181 TLVYAISGNSLLNGFDIVSNNFGVKQEAYILAAIFYFAICFTLSQVVLYLQKKISIIR 238



 Score = 41.1 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
            + IL G + + +L     I   I G L+   RLS+ KL + +  +Y+   R+IP ++VI
Sbjct: 31  LSYILPGLLFSVFLTLFATIFGLIFGILLAMMRLSSIKLFSSLAVIYITAMRSIPLVMVI 90

Query: 146 FFLY 149
            + +
Sbjct: 91  LWFF 94


>gi|170699699|ref|ZP_02890735.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170135399|gb|EDT03691.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 244

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   SF  G +L + A  L +         L  +Y +          +L+A     
Sbjct: 28  LTLGVAAASFGAGTLLGI-AGALGKLSRHAALAWLARIYTTLVRALPELLCLLLAFYAVA 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              + VL +   +        F+   ++L     A++ +I R+ LI VP GQ+EAA A G
Sbjct: 87  PALEAVLHRIGVVSDGFAFDPFIVAALSLGFIQGAYLTDIFRAALINVPVGQIEAAHAYG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQA 363
           +   +    + LP A R  +P + + +LN  K++S    +G F DL+         T   
Sbjct: 147 MRPWQTLTRIRLPIAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHY 206

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   L+   ++L LSIM       L        ++
Sbjct: 207 VFFYLVTAALFLLLSIMSTGLFTMLERYANRGTRR 241


>gi|296162372|ref|ZP_06845165.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. Ch1-1]
 gi|295887405|gb|EFG67230.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Burkholderia sp. Ch1-1]
          Length = 241

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 14/216 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            L +  + +    ++ V + +L I ++L    L R       +      I  F   G  +
Sbjct: 10  YLPYLLMGIPVTLEVTVLAMLLAIPVALVL-ALGRSSPHAGLRWPAGCVIELF--RGSSS 66

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           LV +   + +           F G     P   +  + L     ++++E+ R+G  +VP 
Sbjct: 67  LVQLFWAFYV---------LPFFG--IDLPALAAGVLVLGLNEGSYLSEVFRAGFASVPA 115

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ EA++ LG +       V LPQA+  +IPP  +  + +LK SSL   V   DL     
Sbjct: 116 GQREASLTLGFSAAYRFFCVTLPQALPVMIPPFGNALIVMLKFSSLVSLVTIRDLSFRAN 175

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            I    G+   +  I M IY +L+++++     L A
Sbjct: 176 LISTTLGETALVFGIVMLIYYALALLLSAGAKWLEA 211



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L+G   T  +    M+ A  +  ++  GR S +  + W     +E+FR    LV 
Sbjct: 10  YLPYLLMGIPVTLEVTVLAMLLAIPVALVLALGRSSPHAGLRWPAGCVIELFRGSSSLVQ 69

Query: 145 IFFLYKSVL 153
           +F+ +  + 
Sbjct: 70  LFWAFYVLP 78


>gi|302386909|ref|YP_003822731.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302197537|gb|ADL05108.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 225

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 99/230 (43%), Gaps = 18/230 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +             +  + +I V S VL + L +    L       T K +P+ + +   
Sbjct: 8   ILFEGNNFFRLFGGLWVSLRIAVMSMVLSVGLGILLGMLM------TSKKMPVKFFTRIY 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +  +  +  + L + ++F        NF G        M+  I  + +  A + ++VRS 
Sbjct: 62  LETVRIMPQLVLLFLVYFGAAKHLNVNFSGQ-------MAAVIVFTFWGTAEMGDLVRSA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P  Q ++   LG+T  +  R +++PQ +R ++P + +    ++K +SL V +G  +
Sbjct: 115 LESIPVHQYQSGFGLGMTVLQVYRYIVIPQTIRRLLPSVMNLLTRMIKTTSLVVLIGVIE 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +V VG  +I+ +   +      +  +   +Y ++    +     L+ K+ 
Sbjct: 175 VVKVGKQVIDASRYTVPDAALWVYGVIFLLYFAICYPFSRAAALLDKKLK 224



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 2/153 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   +  +A   M+ +  +G L+G    S    V +  R+Y+E  R +P LV++F +
Sbjct: 18  LFGGLWVSLRIAVMSMVLSVGLGILLGMLMTSKKMPVKFFTRIYLETVRIMPQLVLLFLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y      L +     +    +F          L       I V  +  G  L +   ++ 
Sbjct: 78  YFGAAKHLNVNFSGQMAAVIVFTFWGTAEMGDLVRSALESIPVHQYQSGFGLGMTVLQVY 137

Query: 209 RHFHEK--TGKALPLLYISTFLIFGLPTLVLIA 239
           R+        + LP +      +    +LV++ 
Sbjct: 138 RYIVIPQTIRRLLPSVMNLLTRMIKTTSLVVLI 170


>gi|257125147|ref|YP_003163261.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049086|gb|ACV38270.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 225

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 22/213 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS +LG++L +  T  ++  +           +  F +  +  + L+   + ++F
Sbjct: 30  LVSIVFSILLGLILGIVMTSKNKIIYG----------VLKFYLESMRIIPLLVWLFIIYF 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                      G         +  I    +  A + +IVR  +I++P+ Q E+A ALGL 
Sbjct: 80  GV-------AKGFDLHIDSETTTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALGLD 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---- 362
             +  R VLLPQA+R I P   +    ++K +SLA+ +  A+++ +G  II  + +    
Sbjct: 133 TIQVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKNPM 192

Query: 363 -AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               + L   F+Y  +   I L   ++  K A+
Sbjct: 193 APFWVYLFIFFLYFIICYPITLLSKKMEKKWAV 225



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G V T  +A   ++ + ++G ++G    S NK++  + + Y+E  R IP LV +F +
Sbjct: 18  LMGGLVVTGQIALVSIVFSILLGLILGIVMTSKNKIIYGVLKFYLESMRIIPLLVWLFII 77

Query: 149 YKSV 152
           Y  V
Sbjct: 78  YFGV 81


>gi|224438001|ref|ZP_03658940.1| hypothetical protein HcinC1_08495 [Helicobacter cinaedi CCUG 18818]
 gi|313144447|ref|ZP_07806640.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
 gi|313129478|gb|EFR47095.1| amino acid ABC transporter [Helicobacter cinaedi CCUG 18818]
          Length = 218

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 51/224 (22%), Positives = 96/224 (42%), Gaps = 21/224 (9%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R L   TLT++      +FS + G+VL              T K L ++ +  F +  +
Sbjct: 11  MRLLQGATLTLEIALISIIFSTLGGLVLGFIM----------TCKNLIIVSLCRFYLECI 60

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             + ++A  + + F        +            S  I  S +  A ++++VR  + ++
Sbjct: 61  RIIPILAWLFIVFFGISQYFDISL-------SALQSAIIVFSLWGIAEVSDLVRGAITSL 113

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P+ Q+E+  ALGL   +    ++ PQA++ ++P + S    ++K +SL   +G ADL+ V
Sbjct: 114 PKHQVESGKALGLQQWQMMLYIIFPQALQRLLPSIVSLSTRMIKTTSLVALIGAADLLQV 173

Query: 353 GGTII----NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  II    +QT  +  +       Y  L   ++     L  K 
Sbjct: 174 GQQIIELNKSQTNASFWVYGGIFATYFLLCYPLSYLSRILEKKY 217



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   +I +T+ G ++G      N ++  +CR Y+E  R IP L  +F +
Sbjct: 13  LLQGATLTLEIALISIIFSTLGGLVLGFIMTCKNLIIVSLCRFYLECIRIIPILAWLFIV 72

Query: 149 YKSVLSVL 156
           +  +    
Sbjct: 73  FFGISQYF 80


>gi|254391811|ref|ZP_05007006.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|294815491|ref|ZP_06774134.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|326443842|ref|ZP_08218576.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|197705493|gb|EDY51305.1| glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
 gi|294328090|gb|EFG09733.1| Glutamate transporter permease [Streptomyces clavuligerus ATCC
           27064]
          Length = 224

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 11/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T        + S V G VL        R       +A    Y++      L
Sbjct: 10  YDLLGAFWTTTQLAVYSAIGSLVWGTVLVAM-----RVGPVPVMRAFATGYVNVVRNTPL 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +V+               +F+    +     F    + L  YT  F+ E +RSG+  V
Sbjct: 65  TVVVV-----ACSLGLNQTLRFSLGADNFEDIGFRMAVLGLVAYTGTFVCEALRSGINTV 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD-LVS 351
           P GQ EAA ALGL+  +   L++LPQA RS++ PL +  + L KN+++A A+G  +  + 
Sbjct: 120 PVGQAEAARALGLSFLQVLTLIILPQAFRSVVAPLANVLIALTKNTTVAAAIGVTEAALL 179

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   + N+      +  ++ F ++ L++   L +  ++ ++A+K 
Sbjct: 180 MSEMVENEADALFAVFAVFAFGFIVLTLPTGLLLGWVSKRVAVKR 224



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 31/82 (37%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  LA    I + + GT++ A R+    ++      YV V RN P  VV+   
Sbjct: 12  LLGAFWTTTQLAVYSAIGSLVWGTVLVAMRVGPVPVMRAFATGYVNVVRNTPLTVVVVAC 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMF 170
              +   L     +       F
Sbjct: 72  SLGLNQTLRFSLGADNFEDIGF 93


>gi|240850844|ref|YP_002972244.1| glutamate-aspartate ABC transporter permease component GltK
           [Bartonella grahamii as4aup]
 gi|240267967|gb|ACS51555.1| glutamate-aspartate ABC transporter permease component GltK
           [Bartonella grahamii as4aup]
          Length = 238

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 2/202 (0%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G++ S+F T  +       G  L ++ +S+  +     +V I     +     +L  F  
Sbjct: 37  GLLFSVFLTLFATVLGFFFGTLLAMMRLSSIKLLSWFAIVYITAMRSIPLVMVILWFFVL 96

Query: 257 IGGSTVSPEFM--SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
           +   T +      S  I  + +  A+ AEI+R+G+ +V +GQ  A  ALG+T+ ++  +V
Sbjct: 97  LPFLTGTSIGANKSALITFTAFETAYFAEIIRAGINSVSQGQKYAGQALGMTYWQSMYIV 156

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA R ++P   +Q + L ++++L  A+    L++      N  G   E  ++    Y
Sbjct: 157 ILPQAFRDMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDIAANNFGVKQEAYILAAVFY 216

Query: 375 LSLSIMIALFMNRLNAKIALKE 396
             +   ++  +  L  K+++  
Sbjct: 217 FVICFTLSQIVLYLQKKVSIIR 238



 Score = 43.4 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 34/62 (54%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + + +L     +     GTL+   RLS+ KL++W   VY+   R+IP ++VI +
Sbjct: 33  YILSGLLFSVFLTLFATVLGFFFGTLLAMMRLSSIKLLSWFAIVYITAMRSIPLVMVILW 92

Query: 148 LY 149
            +
Sbjct: 93  FF 94


>gi|184155297|ref|YP_001843637.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
 gi|183226641|dbj|BAG27157.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
          Length = 223

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +A I V S   G+++      L R    +  + +  LY+  F I     L+ +A    
Sbjct: 23  WVSAWIAVVSLFFGLIVGTVFGVL-RTTKSRVLRFILRLYLEIFRIIPTVVLLFLA---- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
            ++  P     N        P      +A S + AA  ++IVR  + +VP+ Q E+ +A+
Sbjct: 78  -YYILPRQLHIN-------MPADWMAVLAFSLWVAAEFSDIVRGAIQSVPQHQRESGLAI 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R +LLPQAM+  +P   +    ++K +SL + +   D+++VG  II      
Sbjct: 130 GLTRFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNST 189

Query: 364 IE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +  F+Y  +  +++L+  +L A+
Sbjct: 190 YPTGVFWVYGLIFFLYFIVDYLLSLWARKLTAR 222



 Score = 41.1 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 44/85 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +    I+GT+ G  R + ++++ +I R+Y+E+FR IP +V++F  
Sbjct: 18  LMGGLWVSAWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPTVVLLFLA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +   L I   +  +    F   
Sbjct: 78  YYILPRQLHINMPADWMAVLAFSLW 102


>gi|218892769|ref|YP_002441638.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|218772997|emb|CAW28809.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 214

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 15/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L F      T   I   + ++G +L +    L       +     LL + 
Sbjct: 1   MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRALLPRASLPLAALLDV- 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 +P L+   L          L  F  I G      F    + L  Y AA+  E+V
Sbjct: 60  ---FRSVPLLIQFVL----------LNSFKSILGLD-WSAFAVACLVLGVYAAAYCTEVV 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+++VP     AA +LGL++R+    ++LP A R   P   +  L+++K++SL + +G
Sbjct: 106 RGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIG 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+    TI+ +  + + ++ I   +Y  +S +IA    RL  +
Sbjct: 166 IVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVIARLGARLERR 211


>gi|16264003|ref|NP_436795.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|307300144|ref|ZP_07579929.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307316503|ref|ZP_07595946.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15140127|emb|CAC48655.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|306897701|gb|EFN28444.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306905033|gb|EFN35616.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 217

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 91/228 (39%), Gaps = 14/228 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L+F          +   +   G VL +    +           L LL   
Sbjct: 1   MFDTALTWNDLAFLAQGAGMTLAVTAVAVTAGTVLGILFGVIRFQIGPYWSAPLTLL--- 57

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +   +P L+ + L         +               F +  + LS YTAAF AEIV
Sbjct: 58  LDVFRSVPLLIQLVLGNAFQSIAKLGWG-----------AFTTSGVVLSLYTAAFCAEIV 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ +VP     AA +LG+T  +  R ++ P A R  +P      L ++K+S+L + +G
Sbjct: 107 RGGISSVPVTTRRAARSLGMTWWQDMRYIVAPLATRVSLPSWIGLTLGVMKDSALVLWLG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L+     ++ +  + + I+LI   IY  LS  +A     L  + +
Sbjct: 167 LVELLRASQILVTRLQEPLFILLICGAIYFLLSFPVARLGGYLEKRWS 214


>gi|307262180|ref|ZP_07543831.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868157|gb|EFM99982.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 222

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 93/232 (40%), Gaps = 18/232 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      +  +     +   A+I   S  L ++       L R  +    +A+   Y+
Sbjct: 1   MGFDWLFEGQNTARLAQGLWLTARISFISVGLSLIFGTLFGLLMRA-NNVFVRAVCRFYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T  I       ++   + ++F        +  G       F       + +  A + ++
Sbjct: 60  ETIRIVP-----ILVWLFAIYFGLSTWFNLHISG-------FWVCIWVFTLWGVAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++K SSLA  +
Sbjct: 108 VRGALASIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPGAINLFTRMVKTSSLAALI 167

Query: 345 GFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  ++V VG  II          +  +  +   +Y  +   ++LF  RL  K
Sbjct: 168 GVIEMVKVGQQIIENALLTNPSASFFVYGLIFILYFLICYPLSLFATRLEHK 219



 Score = 40.7 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  + I GTL G    + N  V  +CR Y+E  R +P LV +F +
Sbjct: 15  LAQGLWLTARISFISVGLSLIFGTLFGLLMRANNVFVRAVCRFYLETIRIVPILVWLFAI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  + +   +      +   +F          L     A I
Sbjct: 75  YFGLSTWFNLHISGFWVCIWVFTLWGVAEMGDLVRGALASI 115


>gi|317049448|ref|YP_004117096.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951065|gb|ADU70540.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 236

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 8/233 (3%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                         L     T++  A    F+ V+G++ +         F      A   
Sbjct: 5   DFSWLLDPTYQQWLLQGVLQTLELAALSSAFAIVIGLLGAFCL-----TFRLAWLDASIE 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST-VSPEFMSLYIALSCYTAAF 280
           L++  F       L+ +   Y          +    G    +   FMS  ++LS +  A 
Sbjct: 60  LFVELFRNTPP--LLQMLFFYFTLTQIGFTREDPVTGLQVPLISAFMSATVSLSLFGGAL 117

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E  RSG  AVP+  +EAA +LG T     R V +P A R  +PPLT+   NL K +S 
Sbjct: 118 CIEAFRSGFDAVPKATLEAARSLGYTRWGLFRHVQVPIAARICLPPLTNVLTNLFKTTSQ 177

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A  +   +L+   G I N T + +E++L+ + IY+ L  ++   +  +   +A
Sbjct: 178 ASVITVPELMYAAGQIYNDTFRTLEVMLLILVIYVVLVSLVVWLIGWVQRALA 230



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +  D +Y   +L G + T  LA      A +IG L           +     ++VE+FRN
Sbjct: 8   WLLDPTYQQWLLQGVLQTLELAALSSAFAIVIGLLGAFCLTFRLAWLDASIELFVELFRN 67

Query: 139 IPPLVVIFFLYKSVLSV 155
            PPL+ + F Y ++  +
Sbjct: 68  TPPLLQMLFFYFTLTQI 84


>gi|221369463|ref|YP_002520559.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221162515|gb|ACM03486.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 221

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 9/199 (4%)

Query: 195 VLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQF 254
           +   V+ L                  L + +  +I  L  L  + L   ++   P     
Sbjct: 31  LCAAVIGLGLVGGLFLALGALSHRRWLRWPAFAVIDFLRALPPLVLLIFIYSGLPF---- 86

Query: 255 NFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
                      F ++ +A     +A+ AEI R+G+ +VP GQ EAA A GLT  +    V
Sbjct: 87  ----AGLAISPFAAVAVAFFLNNSAYYAEIYRAGIQSVPAGQTEAARACGLTTGQTLAHV 142

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +LPQA+R+++P L S  + ++K +SLA  V  A+L+       + T  A  ++L  +   
Sbjct: 143 VLPQAVRNVLPDLLSNTVEVVKLTSLASVVSLAELLYSANMARSLTYNASPLVLAALVY- 201

Query: 375 LSLSIMIALFMNRLNAKIA 393
           L L   +   ++R   ++A
Sbjct: 202 LVLLWPLVRLVSRYQRRLA 220


>gi|254502244|ref|ZP_05114395.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222438315|gb|EEE44994.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 220

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 92/232 (39%), Gaps = 14/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + F        L F          I   S   G VL +         +E        
Sbjct: 2   QQSISFFSGFGVNDLWFLGEAALRTLWISAVSISAGTVLGVL---FGWILYEAKFLGAVT 58

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L     +   +P ++ + L Y           F  I G    P F S  + L+ Y A+ +
Sbjct: 59  LAPILDVFRSVPMIIQLVLFYN----------FAPIIGLDFGP-FGSGVVVLTLYAASLV 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           A + R G+ AV +    AA +LG+++ +  R V+ P   R++ P      L ++K+S+L 
Sbjct: 108 ANVARGGIEAVGKPMRRAARSLGMSYWQDMRHVVFPIGGRAVFPSWVGVALGVMKDSALV 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +G+ +LV     +I +T +   I+ I    Y +LS  I+ +  +L  + A
Sbjct: 168 SVLGYVELVKASQILITRTQEPFLILAIAGAFYFALSYPISRYAAQLEKRWA 219


>gi|329944505|ref|ZP_08292670.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328530270|gb|EGF57149.1| ABC transporter, permease protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 291

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 25/236 (10%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G  + ++ +     T+   A   V +F LGI L        R    +  + L  
Sbjct: 73  EWRYFLGHSVVSQLVEAAGTTLSLGAVAAVLTFPLGIALGWL-----RLLDNRPIRWLVG 127

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L+I       +  LV   L     F                  +F  L + +   T+A  
Sbjct: 128 LWIDAMRAVPMLLLVYFFLLVVPRFVT--------------VSDFWKLALPIVMCTSATT 173

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ RSG+ A+ RGQ EAA+ALG++     RL+L PQA+R ++P L +Q + ++K ++LA
Sbjct: 174 AEVFRSGVRALDRGQTEAAVALGMSGSLTMRLILAPQALRLMLPTLITQMVTIIKGTTLA 233

Query: 342 VAVGFADLVSVGGTIINQT------GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             + + +L+  G T+I Q           +  +I    Y+ ++  +      + ++
Sbjct: 234 YVLAYPELMYRGSTVIGQAKIDAHLSVFFQTYVIIAVAYIIVNWALGALARYIESR 289


>gi|260577144|ref|ZP_05845121.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
 gi|259020618|gb|EEW23937.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sp. SW2]
          Length = 434

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 78/316 (24%), Positives = 129/316 (40%), Gaps = 20/316 (6%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
             +L G V    L +  +   +I G +V         LV  + R  + V        V  
Sbjct: 134 RLLLWGTVIYPALGYWLLWGGSIWGPVVAMAGFGLLALVFKLLRPLLGVPVAGGLGFVAA 193

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFL-NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
            L+            + V+P G+    +       L++         S  LGI+L+L   
Sbjct: 194 VLWWLFAQGPVAGLLAGVMPVGLVPVESDRFGGFLLSIVIGVTSIAASLPLGILLAL--- 250

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
              R       K L + +I       L T++  A     +F  P           T    
Sbjct: 251 --GRRSDMFLVKTLSVAFIEFIRGVPLITMLFTASLLLQYFLPP----------GTSFDL 298

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
            + + I ++ + AA++AE+VR G+ A+PRGQ EAA ALGL +  A RL++LPQA++  IP
Sbjct: 299 ILRVDILVTIFAAAYLAEVVRGGMAALPRGQYEAADALGLDYWSAERLIILPQALKISIP 358

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMI 381
            + S +++L K+++L   VG  D +    TI+       G   E  L    ++  L   +
Sbjct: 359 SIVSTFISLFKDTTLVSFVGLLDPLKGISTIVRADMAWKGVYWEPYLFVGAVFFVLCFSM 418

Query: 382 ALFMNRLNAKIALKEK 397
           + +   L  K+    K
Sbjct: 419 SRYSMYLERKLKTDHK 434


>gi|238063941|ref|ZP_04608650.1| polar amino acid ABC transporter permease component [Micromonospora
           sp. ATCC 39149]
 gi|237885752|gb|EEP74580.1| polar amino acid ABC transporter permease component [Micromonospora
           sp. ATCC 39149]
          Length = 281

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 7/181 (3%)

Query: 218 ALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYT 277
             P+  ++    +    L LI + Y L    P L        + + P  +   +AL    
Sbjct: 107 FFPVRALAAGYTYTFRGLPLIIVLYVLTLGVPGLRL------AGMPPVLVLGGLALVLTY 160

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
             ++AE+ R+G+ +V   Q+ AA +LGL++R+  R V+LPQA+R + PPL +  + L K+
Sbjct: 161 GGYLAEVFRAGIESVHPSQLAAARSLGLSYRQTMRHVVLPQAVRRVAPPLLNDVVALQKD 220

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             L    G  D V        +T       ++   +++ L+I +    + +  + A +++
Sbjct: 221 VGLVSLAGPIDAVRAAQIATAETFNYTP-YIVAGALFVLLAIPLIAVTDWVTLRAARRQE 279

Query: 398 K 398
           +
Sbjct: 280 R 280


>gi|76664993|emb|CAJ17938.1| amino acid ABC transporter, substrate binding component [Candidatus
           Phytoplasma solani]
          Length = 350

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 4/158 (2%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGS----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
            ++    +      L  FNFI        +   F +  I L   T A + +I+   +  +
Sbjct: 190 FVSFLNAIPISIQSLLVFNFITTIESFKNIKIAFSASLIVLLLNTIANLIQIMMHNINLL 249

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ+EA  ALG+T ++    ++  Q+++   P +  Q++  +K++SL   +GF+ L+  
Sbjct: 250 DKGQIEAGYALGMTQKQVFNCIIFEQSIKKTYPAVGKQFITNIKDTSLFSIIGFSSLLWQ 309

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
             +  +         +I   +YL +  +    +  LN 
Sbjct: 310 AQSNASVDLDIWTPYIIVCCVYLIIVFITNFILKILNR 347


>gi|258545108|ref|ZP_05705342.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258519627|gb|EEV88486.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 219

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 14/219 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           ++ ++   L +V  L    ++  +       +   YI   L    P L
Sbjct: 10  LPQYVAATWQTLQLSLWGVALSLVFGLLVC-IAVVYRLPFFAPVCRAYIE--LSRNTPLL 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   Y                       F    I L+   AA++AE  R G+ AV R 
Sbjct: 67  VQLFFLYY-----------GLPKFGIRLSGFACGVIGLTFLGAAYMAEAFRGGIAAVSRV 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA+A+GLT  +A   V+ PQ++ + IP L +  L L+K +S+   +   +L++V   
Sbjct: 116 QGEAALAVGLTPAQAFLYVIFPQSLAASIPALVANTLFLIKETSVVGVLAVVELLNVSKE 175

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +I    +  E + + +  Y S+ + + +    L  ++  
Sbjct: 176 LIGLDYKTNEALFLLVLGYASILLPVIVAAPWLERRVRR 214



 Score = 40.7 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 1/152 (0%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
             T  L+  G+  + + G LV    +      A +CR Y+E+ RN P LV +FFLY  + 
Sbjct: 18  WQTLQLSLWGVALSLVFGLLVCIAVVYRLPFFAPVCRAYIELSRNTPLLVQLFFLYYGLP 77

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS-FVLGIVLSLFATRLSRHFH 212
                         G+                 A   V     L + L+     L   F 
Sbjct: 78  KFGIRLSGFACGVIGLTFLGAAYMAEAFRGGIAAVSRVQGEAALAVGLTPAQAFLYVIFP 137

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           +    ++P L  +T  +    ++V +    +L
Sbjct: 138 QSLAASIPALVANTLFLIKETSVVGVLAVVEL 169


>gi|116049209|ref|YP_791988.1| ABC transporter permease [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254234384|ref|ZP_04927707.1| hypothetical protein PACG_00227 [Pseudomonas aeruginosa C3719]
 gi|254239633|ref|ZP_04932955.1| hypothetical protein PA2G_00250 [Pseudomonas aeruginosa 2192]
 gi|296390364|ref|ZP_06879839.1| ABC transporter permease [Pseudomonas aeruginosa PAb1]
 gi|115584430|gb|ABJ10445.1| putative amino acid ABC transporter permease [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126166315|gb|EAZ51826.1| hypothetical protein PACG_00227 [Pseudomonas aeruginosa C3719]
 gi|126193011|gb|EAZ57074.1| hypothetical protein PA2G_00250 [Pseudomonas aeruginosa 2192]
          Length = 214

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 15/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L F      T   I   + ++G +L +    L       +     LL + 
Sbjct: 1   MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRALLPRASLPLAALLDV- 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 +P L+   L          L  F  I G      F    + L  Y AA+  E+V
Sbjct: 60  ---FRSVPLLIQFVL----------LNSFKSILGLD-WSAFAVACLVLGVYAAAYCTEVV 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+++VP     AA +LGL++R+    ++LP A R   P   +  L+++K++SL + +G
Sbjct: 106 RGGVLSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIG 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+    TI+ +  + + ++ I   +Y  +S ++A    RL  +
Sbjct: 166 IVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVARLGARLERR 211


>gi|86742203|ref|YP_482603.1| amino acid ABC transporter permease [Frankia sp. CcI3]
 gi|86569065|gb|ABD12874.1| amino acid ABC transporter membrane protein 1, PAAT family [Frankia
           sp. CcI3]
          Length = 189

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 19/203 (9%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + +LG VL+       R       +     Y+ T     L  +    +      D     
Sbjct: 3   ALILGTVLAAM-----RVSPVPPLRWTGTAYVQTVRNTPLTVVFFFVVFVLPQLD----- 52

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                    V   F    +ALS Y AA + E VRSG+  V  GQ EAA ALGLT  +  R
Sbjct: 53  --------IVFSYFTFAVVALSIYHAALVCEAVRSGINGVDLGQAEAARALGLTFSQTLR 104

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
           +++LPQA R+++ PL S    L++N+S+A A G  +L  +   +      A+  +L+   
Sbjct: 105 MIILPQAFRNVLQPLGSVVSALIRNTSIAAAFGVQELTGMVQRLTTANPDAVIAVLLGGV 164

Query: 373 I-YLSLSIMIALFMNRLNAKIAL 394
           + YL L++++A  ++    ++A 
Sbjct: 165 VAYLILTVVLAAGLSLAERRVAR 187



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%)

Query: 105 IPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIV 164
           + A I+GT++ A R+S    + W    YV+  RN P  VV FF+   +  +  +  +   
Sbjct: 1   MAALILGTVLAAMRVSPVPPLRWTGTAYVQTVRNTPLTVVFFFVVFVLPQLDIVFSYFTF 60

Query: 165 LPFGMFLNNRGL 176
               + + +  L
Sbjct: 61  AVVALSIYHAAL 72


>gi|324992108|gb|EGC24030.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK405]
 gi|324994202|gb|EGC26116.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus sanguinis SK678]
 gi|327459419|gb|EGF05765.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK1]
 gi|327472827|gb|EGF18254.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus sanguinis SK408]
          Length = 226

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 13/215 (6%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                       F  +LG +   F   L R +     K+L   YI       L   +   
Sbjct: 13  YQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKIPILKSLATAYIEFSRNTPLLLQLFFL 72

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
                     +  +                 I L     +++AE  RSGL AV R Q E 
Sbjct: 73  YFGLPRVGLVLSSE-------------ACATIGLIFLGGSYMAESFRSGLEAVSRTQREV 119

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            +++GL   +    V+LPQA    +P  ++  + L+K +S+  AV  ADL+ V   +I  
Sbjct: 120 GLSIGLRPVQVFYYVILPQAAAIALPSFSANVIFLIKETSVFSAVALADLMFVAKDLIGL 179

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +    +L+ +  YL + + I+L  + +  ++  
Sbjct: 180 YYETDTALLMLVIAYLIILLPISLGFSCIERRLRR 214



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   S Y       F+ T ++AF G++ +  +G LV   R     ++  +   Y+E  RN
Sbjct: 3   WDIVSDYYPLYQEAFLLTMFIAFWGILGSIAVGFLVSLIRFYKIPILKSLATAYIEFSRN 62

Query: 139 IP 140
            P
Sbjct: 63  TP 64


>gi|269120154|ref|YP_003308331.1| polar amino acid ABC transporter inner membrane subunit [Sebaldella
           termitidis ATCC 33386]
 gi|268614032|gb|ACZ08400.1| polar amino acid ABC transporter, inner membrane subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 218

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 17/215 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+       +FS + GI+L +       +      + +  +Y+  F I  +   
Sbjct: 17  LEGLWVTLRIALLSIIFSVIFGIILGIIM-----NSKNILVRVITRIYLEFFRIIPV--- 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             I   + + F  P+    N  G         +  +  S + +A + ++VR  + ++P+ 
Sbjct: 69  --IVWLFIVFFWIPMGTGLNITGEG-------AAVLVFSMWGSAEMGDLVRGAIESLPKI 119

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A ++GL   +    VL+PQA++ +IP   +    ++K +SL V +G  D+V  G  
Sbjct: 120 QSESAKSIGLNKIQIYYYVLIPQALKRVIPSAINLSTRVIKTTSLVVLIGVVDVVKKGQQ 179

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           II +T  A  I  +   IY  +   ++ +  +L  
Sbjct: 180 IIERTKSAFFIYALLFLIYFIICYPLSYYSRKLEK 214



 Score = 53.0 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 44/97 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y S +   +A+L G   T  +A   +I + I G ++G    S N LV  I R+Y+E F
Sbjct: 4   LDYGSLAQIFSALLEGLWVTLRIALLSIIFSVIFGIILGIIMNSKNILVRVITRIYLEFF 63

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R IP +V +F ++  +     +          +F   
Sbjct: 64  RIIPVIVWLFIVFFWIPMGTGLNITGEGAAVLVFSMW 100


>gi|163855573|ref|YP_001629871.1| ABC-type amino acid transport system, permease component
           [Bordetella petrii DSM 12804]
 gi|163259301|emb|CAP41601.1| ABC-type amino acid transport system, permease component
           [Bordetella petrii]
          Length = 220

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 5/162 (3%)

Query: 237 LIALKYQLHFDKPVLGQFN-----FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           L+A    +    P++ QF      F    +         + LS Y  A  +E+VRSGL +
Sbjct: 57  LLASYVDVMRSIPLIIQFILVNSAFAALGSPLDPLEVGVLTLSLYMGALTSELVRSGLRS 116

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V      A+ +LG+++ +  R +  P A+R++ P      + L K+++L   VG+ +L+ 
Sbjct: 117 VRPELRRASRSLGMSYWQELRHIGAPLAVRTVFPSWIGTLIALTKDTALVSVVGYVELLR 176

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               +I +T +A+ I+      Y  +   I+ +  ++  +++
Sbjct: 177 AAQILIVRTNEALMILAGVGLAYFIICYPISRYSRKIERRLS 218


>gi|320546923|ref|ZP_08041225.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus equinus ATCC 9812]
 gi|320448441|gb|EFW89182.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus equinus ATCC 9812]
          Length = 215

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 98/215 (45%), Gaps = 14/215 (6%)

Query: 178 FPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVL 237
                +    ++ +F  +  I+L  F   L ++++      +  +YI   L    P L+ 
Sbjct: 1   MYQQALVLTIRLALFGILGAIILGFFI-SLIKYYNVAILSQICQIYIE--LSRNTPLLIQ 57

Query: 238 IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQM 297
           +   Y L++  P +          V P  +   + L     +++AE  RSGL AV + Q 
Sbjct: 58  L---YFLYYGLPKV--------GVVLPSELCAIVGLIFLGGSYMAESFRSGLEAVSKRQY 106

Query: 298 EAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII 357
           E  +++GL+H +    V+LPQA+   +P L +  + L+K +S    V  ADL+ +   +I
Sbjct: 107 EVGLSIGLSHLQNVFYVILPQAIAVALPSLVANIIFLVKETSFFSIVALADLMYIAKDLI 166

Query: 358 NQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
               +  E +L+ +  YL + + I+L    L  ++
Sbjct: 167 GLYYETDEALLMLVVAYLIILLPISLLARVLERRL 201



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V T  LA  G++ A I+G  +   +     +++ IC++Y+E+ RN P L+ ++FLY  +
Sbjct: 6   LVLTIRLALFGILGAIILGFFISLIKYYNVAILSQICQIYIELSRNTPLLIQLYFLYYGL 65

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
             V  +    +    G+          +      A
Sbjct: 66  PKVGVVLPSELCAIVGLIFLGGSYMAESFRSGLEA 100


>gi|302541694|ref|ZP_07294036.1| glutamate permease [Streptomyces hygroscopicus ATCC 53653]
 gi|302459312|gb|EFL22405.1| glutamate permease [Streptomyces himastatinicus ATCC 53653]
          Length = 214

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 14/210 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++ V++ +L + L +      R     + +A    +++      L  L      + +  
Sbjct: 19  VQLTVYASLLALALGVLMAAF-RVAPVASLRAFGTAWVTVLRNTPLTLL-----FFAVML 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P            + P      +AL CYT+AFI E VRSG+  VP GQ EAA +LG+T
Sbjct: 73  GLP--------RFGLILPFTAFAVLALGCYTSAFICEAVRSGINTVPVGQGEAARSLGMT 124

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    V+LPQA R++IPP+ S  + L KNS++A +    +L+     +       I  
Sbjct: 125 FEQTLGAVVLPQAFRAVIPPVGSTLIALAKNSAIAGSFSVTELLGTYKPLNEMGYSIIWS 184

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +     YL +++ I+     L  +  +  
Sbjct: 185 FVWIAVGYLLVTLTISAIFTVLEKRWGVPR 214



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  L     + A  +G L+ A R++    +      +V V RN P  ++ F +   
Sbjct: 14  GLLGTVQLTVYASLLALALGVLMAAFRVAPVASLRAFGTAWVTVLRNTPLTLLFFAVMLG 73

Query: 152 VLSV 155
           +   
Sbjct: 74  LPRF 77


>gi|94987159|ref|YP_595092.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
 gi|94731408|emb|CAJ54771.1| ABC-type amino acid transport system, permease component [Lawsonia
           intracellularis PHE/MN1-00]
          Length = 232

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 94/217 (43%), Gaps = 13/217 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L              + +  +G++L +    + + +     +    +Y   F        
Sbjct: 19  LPNIFQGSLVTIITVLLALFIGLILGI-PMAILQVYGPPYIRYSIQIYCWFFR------- 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                   +     +     F           +  I L   ++++  +I+RS +  +P G
Sbjct: 71  -----GVPILLLLFLFYFGLFELLQLNFSAVTTSCIVLGIASSSYQTQIIRSAIQMIPSG 125

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q++AA ALG+T  +A  +++LPQA+R  IP  +++Y  LLK+S++   +G  ++++    
Sbjct: 126 QLKAAKALGMTSTQAILVIILPQALRLSIPGWSNEYSILLKDSAICFVLGTPEIMAQTQF 185

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++T + + + ++   +Y  ++++    + RL   +
Sbjct: 186 VASRTYEHLLLYIVAGILYFLITLIGVSLLRRLEQYL 222


>gi|317049497|ref|YP_004117145.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951114|gb|ADU70589.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 235

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 94/217 (43%), Gaps = 10/217 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   + ++G  L+L  T   R         L  LY+S      +P ++ + + + 
Sbjct: 15  PLTLAIMFVAMIVGFCLALITTTF-RVRRIPLISQLADLYVS--YARSVPVVLQLFVAF- 70

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++ +   +G        ++  + LS Y   +++E++R   +AV RGQ +AA ++
Sbjct: 71  --YGLPLVLESFGVG--DFMSATVASMVGLSLYHGGYLSEVMRPAFLAVERGQHDAADSM 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-- 361
           G + R     ++ PQA+   +P   +  + L+ N +L + +G AD+++    I+ +    
Sbjct: 127 GYSFRHKMLRIVGPQALHIGLPGYGNAIIYLIHNVALVMYIGAADVMATAHLIMERDYNQ 186

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 L+   +Y  L ++  L +     + A    K
Sbjct: 187 YQFGTYLVLAVLYSLLCLVAWLIVRYFERRHAKYNSK 223



 Score = 36.8 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  + F  MI    +  +    R+    L++ +  +YV   R++P ++ +F  
Sbjct: 10  LLSALPLTLAIMFVAMIVGFCLALITTTFRVRRIPLISQLADLYVSYARSVPVVLQLFVA 69

Query: 149 YKSVLSV 155
           +  +  V
Sbjct: 70  FYGLPLV 76


>gi|302337869|ref|YP_003803075.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
 gi|301635054|gb|ADK80481.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta smaragdinae DSM 11293]
          Length = 218

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 85/209 (40%), Gaps = 18/209 (8%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
            + +   +LG V+++      R++  +       L +          LV     Y   F 
Sbjct: 28  IVLLIGLILGSVIAVV-----RYYKIRILSQFFSLLVEIIRGAPFLLLV-----YATFFI 77

Query: 248 KPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTH 307
            P +              F +    LS  ++AF++EI  SGL ++  GQ  AA ++G+  
Sbjct: 78  LPNI--------GISLSPFGTGVCVLSFTSSAFMSEIFLSGLRSIDTGQYFAADSIGMNF 129

Query: 308 RKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
            +   L++ PQ ++  +P +  Q +  +K++S+   VG A++V     +   T  +    
Sbjct: 130 FQKMTLIIFPQMIKLTLPSIVGQVIMTIKDTSIVSLVGLAEVVRTSRQMSLLTQNSFLAF 189

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           LI    +  +   + L    L  +++ + 
Sbjct: 190 LIVGGYFFVICYPLILVSKNLERRLSTRH 218


>gi|256026688|ref|ZP_05440522.1| permease protein of ABC transporter system [Fusobacterium sp. D11]
 gi|289764683|ref|ZP_06524061.1| amino acid ABC transporter [Fusobacterium sp. D11]
 gi|289716238|gb|EFD80250.1| amino acid ABC transporter [Fusobacterium sp. D11]
          Length = 219

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 13/180 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  K + + YI   L    P LV +   + L+F  P +       G   +PE +   I L
Sbjct: 47  KFFKQIIVGYIE--LSRNTPLLVQL---FFLYFGLPKV-------GLRFNPE-ICGIIGL 93

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +    +++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT+  + 
Sbjct: 94  TFLGGSYMIETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIF 153

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK +S+  A+   D++ V   +I    +  E + + +  YL + + ++L    L  K+ 
Sbjct: 154 LLKETSVFSAISLMDMMFVAKDLIGLYYKTEESLFMLIVGYLIILLPLSLLGVWLERKLK 213


>gi|238784128|ref|ZP_04628142.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
 gi|238714974|gb|EEQ06972.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           bercovieri ATCC 43970]
          Length = 190

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 15/198 (7%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           + ++G         L RH                ++I G P L  +AL Y          
Sbjct: 3   AAIIGACAGFILQALCRHH----LWLYWPWRTYVWIIRGTPYLAQLALFY---------- 48

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
            F             +  ++L+ Y++A+  EI R+   ++ +GQ+EAA    ++  K+  
Sbjct: 49  -FGLPAIGVTLTAVEATVLSLAIYSSAYFGEIFRTAWKSIGQGQLEAAQVHDISAWKSFW 107

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            +  PQA+R  +P L +Q++  +K S++A  +   +L    G I+  T   I    + + 
Sbjct: 108 HIQTPQALRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQIVANTYTYIVPYTLLIL 167

Query: 373 IYLSLSIMIALFMNRLNA 390
            Y  L+  I++ +  L+ 
Sbjct: 168 SYWLLAQGISVSVRLLSR 185


>gi|226331011|ref|ZP_03806529.1| hypothetical protein PROPEN_04941 [Proteus penneri ATCC 35198]
 gi|225201806|gb|EEG84160.1| hypothetical protein PROPEN_04941 [Proteus penneri ATCC 35198]
          Length = 121

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/114 (37%), Positives = 71/114 (62%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E VR+ + ++PRGQ  A +ALGLT  +  R VLLP A R IIPP+TS+ LNL+KNS++
Sbjct: 1   MCEQVRAAINSLPRGQKAAGLALGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAI 60

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +G  D+ +    +++ + +A E        Y+ ++++I L M+ L  ++ L
Sbjct: 61  ASTIGLIDMAAQANKLLDYSAKAYESFTAITLAYVFINVIIMLLMSWLEKRVRL 114


>gi|158425495|ref|YP_001526787.1| putative ABC amino acid transporter permease/substrate-binding
           protein [Azorhizobium caulinodans ORS 571]
 gi|158332384|dbj|BAF89869.1| putative ABC amino acid transporter permease/substrate-binding
           protein [Azorhizobium caulinodans ORS 571]
          Length = 227

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 54/182 (29%), Positives = 96/182 (52%), Gaps = 6/182 (3%)

Query: 222 LYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTV-----SPEFMSLYIALSC 275
           L+ + F +F +P L  +   Y +L  + P+L Q  FI            +F S  + LS 
Sbjct: 45  LFGAAFRLFSVPILSQLTFGYVELVRNTPILVQLFFIFYGLPAIGLGISQFWSGVLCLSL 104

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           +  A+  E +R GL+ + +G  EAA +L L+ R+  RLV LP A+R+ +P + +  ++LL
Sbjct: 105 WAGAYQVENIRGGLLTIEKGLKEAAFSLSLSLRQYFRLVALPLAIRTSLPSMLNTSISLL 164

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           KNSS   A+G A++  +    I    +A+E+      +YL+L I+++L  + +  K+   
Sbjct: 165 KNSSYLQAIGLAEMTFIAVDRIATDFRAVEMFTAIGALYLALVIVLSLMTSIVEHKLRKP 224

Query: 396 EK 397
            +
Sbjct: 225 FR 226



 Score = 40.3 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 37/79 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             A++ G   T  +    ++ + +IG    A RL +  +++ +   YVE+ RN P LV +
Sbjct: 19  WPALMGGLWVTCQVTLLSIVLSLLIGLFGAAFRLFSVPILSQLTFGYVELVRNTPILVQL 78

Query: 146 FFLYKSVLSVLPIPDHSIV 164
           FF++  + ++         
Sbjct: 79  FFIFYGLPAIGLGISQFWS 97


>gi|158422352|ref|YP_001523644.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158329241|dbj|BAF86726.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 538

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           +I G P LVL+     + +  P         G  + P F++  +AL  + AA +AE  R+
Sbjct: 376 VIGGTPLLVLLLF---VCYGLPE-------AGLPIGP-FLAGVLALGLHHAAGMAEAYRT 424

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L  V R QMEAA++L ++  +A + V+LPQA+R+++P     ++ +LK+SSL   +  A
Sbjct: 425 RLAVVTRTQMEAAVSLNMSRGQAFKAVVLPQAVRALLPSTARGFVLVLKDSSLVSVILLA 484

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           DL     ++ +     + I L+   IYL L +  A        
Sbjct: 485 DLTRTYESVASVHQDFLGIGLLVAAIYLVLGLPFARLAAWAER 527


>gi|17549796|ref|NP_523136.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17432051|emb|CAD18728.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 223

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +PF   +  + +      +   A +      LG++    A   SR       ++L    +
Sbjct: 1   MPFDFAVAAQAVPVLLRGLKVTAVVSTIGIPLGVLAGTLAAYASR------LRSLAPACL 54

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           +   +  +  +  + L Y   F  P L           +          + YT  +  EI
Sbjct: 55  ARSYVATVRNVPYLILVYLSFFGLPKL--------GVAASAMAVAIGCTALYTGGYFCEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ L +VPRGQ  AA++LG++  +  R ++ PQ +  +IPP TS  + + K+S++   +
Sbjct: 107 LRAALHSVPRGQSGAALSLGMSRWQVQRYIVGPQLLGFLIPPTTSLVIMMFKDSAIFSVM 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              ++      +   T    EI+     IY   S+++A     L   +A + 
Sbjct: 167 SLPEMTYQSNLLTANTFAYTEILAATAAIYWLTSVLLAAAGRSLE-HLARRR 217



 Score = 37.2 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 62/184 (33%), Gaps = 9/184 (4%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +L G   T  ++  G+    + GTL        +   A + R YV   RN+P L++++ 
Sbjct: 14  VLLRGLKVTAVVSTIGIPLGVLAGTLAAYASRLRSLAPACLARSYVATVRNVPYLILVYL 73

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            +  +  +        V      L   G     L    ++     S   G  LSL  +R 
Sbjct: 74  SFFGLPKLGVAASAMAVAIGCTALYTGGYFCEILRAALHSVPRGQS---GAALSLGMSRW 130

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
               +    + L       FLI    +LV++  K    F    L +  +      +  F 
Sbjct: 131 QVQRYIVGPQLLG------FLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFA 184

Query: 268 SLYI 271
              I
Sbjct: 185 YTEI 188


>gi|307544954|ref|YP_003897433.1| ABC transporter permease [Halomonas elongata DSM 2581]
 gi|307216978|emb|CBV42248.1| ABC-type transport system permease protein [Halomonas elongata DSM
           2581]
          Length = 259

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 13/248 (5%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
             L    + V+ +    +   + +   +  L    LT+       V  F+L I L L   
Sbjct: 11  LGLIAVAVLVVTLMALQMRWDWLLDYRDAILGGLWLTLVLLVTTSVAGFLLAIPLGLV-- 68

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP- 264
              +    +    L   + +  LI G P L+ I L Y       +      + GS + P 
Sbjct: 69  ---QVTGPRPLAWLARGFCT--LIRGTPLLLQIWLLYYG--LGSLFPYLPGVRGSWLWPY 121

Query: 265 ---EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
               +   ++AL+   A +  E++R G   VP+G++EAA +LG+      R + LP+A++
Sbjct: 122 LTEAWPYAFVALTLSFAGYEGEVMRGGFAGVPKGELEAARSLGMHPLTILRRIWLPRAVQ 181

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
            ++P L  + +  LK + L   +   D  +V G I  +T    E +L+   IYL L+ +I
Sbjct: 182 RVLPTLNGELIIQLKATPLVATIAAVDTYAVFGRIRQETYMVYEPLLLMALIYLILAGLI 241

Query: 382 ALFMNRLN 389
            L    L 
Sbjct: 242 TLAFGALE 249


>gi|303259057|ref|ZP_07345036.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302640000|gb|EFL70456.1| amino acid ABC transporter, permease protein [Streptococcus
           pneumoniae SP-BS293]
          Length = 238

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 5/211 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +     G+      + T   + +   + G+VL+L    + +    K    L   ++S 
Sbjct: 25  FSLRSVFDGIPRIVQQLPTTIMLTIGGALFGLVLALL-FAIVKINRVKILYPLQAFFVSF 83

Query: 227 FLIFGLPTLVLIAL-KYQLHFDKPVLGQFNFIG-GSTVSPEFMSLYIALSCYTAAFIAEI 284
             + G P LV + L  Y +      L Q    G      P      +A +   AA+ +E 
Sbjct: 84  --LKGTPILVQLMLTYYGIPLALKALNQQWGTGLNINAIPAAAFAIVAFAFNEAAYASET 141

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +++V  G++EAA +LG+T  +  R V++P A     P L +  + L K +SLA + 
Sbjct: 142 IRAAILSVNPGEIEAARSLGMTRAQVYRRVIIPNAAVVATPTLINSLIGLTKGTSLAFSA 201

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYL 375
           G  ++ +    +     +  E  +    +++
Sbjct: 202 GVVEVFAQAQILGGADYRYFERFISVALVFM 232


>gi|298717477|ref|YP_003730119.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361666|gb|ADI78447.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 230

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 9/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+     +F+ S +LG + +    R          + L + Y   F   G+
Sbjct: 12  WSILDAVPVTLLMAVTVFICSTLLGGLFAFIEHR-----RIPVLRQLVITYKIAF--KGV 64

Query: 233 PTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P +V+I L Y         V         +   P ++ + +ALS   AAF AE+ +  L 
Sbjct: 65  PMVVVIFLAYYGLPPALHFVATLIGVEVNAHSLPNWVIIIVALSACVAAFQAEVWKGALN 124

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +   GQ +AA++LG +  +  R V+ PQ + + IP L + ++ ++K  SLA A+   D+ 
Sbjct: 125 SFDSGQSDAALSLGYSGGQLFRRVMFPQIIVAAIPDLANAFMVIMKALSLAFAIEVVDIF 184

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +            +E  LI +  Y+ ++ ++    +R+ A + ++
Sbjct: 185 AQAQLTAALNFYYLEAFLIAVVFYMVIAYVVTKIADRIEAALRVR 229


>gi|311280750|ref|YP_003942981.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
 gi|308749945|gb|ADO49697.1| polar amino acid ABC transporter, inner membrane subunit
           [Enterobacter cloacae SCF1]
          Length = 260

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 6/179 (3%)

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS--PEFMSL 269
                +  PLL    F  F    L+ +  +  ++     + +F+ + G+     PEF+  
Sbjct: 62  WVSIFRNTPLLVQLLFWYFAAWNLLPLGFRDIVN----GVYRFSVLPGNVWWLTPEFLCS 117

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
              L+ +T+AF+ E V +GL AVP GQ EAA A G +     R +LLPQA+ +   P+  
Sbjct: 118 AWGLAAFTSAFLVEEVTAGLRAVPLGQYEAAQAQGFSAPALFRHILLPQALANAWQPVVG 177

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QYLNL+K SSLA  +GFA+L      I +    A+E   +   +YL   +++ L + R 
Sbjct: 178 QYLNLMKLSSLASGIGFAELTCQVRQIESYNAHALEAFALGTALYLLTGVLMGLTLTRF 236



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 52/115 (45%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G++ T W+  +G+  A+++  L+   RL+  +  A +   +V +FRN P LV +
Sbjct: 16  LQWLLSGWLTTLWVTLAGITLASLLAALLLLLRLAGGRTGAALTACWVSIFRNTPLLVQL 75

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            F Y +  ++LP+    IV     F    G  +        +   + +F    ++
Sbjct: 76  LFWYFAAWNLLPLGFRDIVNGVYRFSVLPGNVWWLTPEFLCSAWGLAAFTSAFLV 130


>gi|237752283|ref|ZP_04582763.1| ArtM protein [Helicobacter winghamensis ATCC BAA-430]
 gi|229375772|gb|EEO25863.1| ArtM protein [Helicobacter winghamensis ATCC BAA-430]
          Length = 217

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 48/222 (21%), Positives = 101/222 (45%), Gaps = 24/222 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+       +FS + G +L    T  SR       + +  LY+ +  I      
Sbjct: 14  LQGVFITLQIALIAIIFSCLFGFILGYLMTLKSRL-----LRGICRLYLESIRIIP---- 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            ++A  + ++F    +   + +G         +  +A S +  A + ++VR  + ++P+ 
Sbjct: 65  -ILAWLFIIYFGFSSVINLSGVG---------ACILAFSLWGIAEMGDLVRGAISSLPKH 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q ++A ALGL   +    V+ PQ+ + ++P L + +  ++K +SLA  +G +D++ VG  
Sbjct: 115 QEQSARALGLKEWQVQVFVVFPQSFKRLLPSLVNLFTRMIKTTSLAALIGVSDMLKVGQQ 174

Query: 356 IINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           II          +  +     F+Y +L   +++F + L  K+
Sbjct: 175 IIEVNLISYPTASFWVYGGIFFVYFALCYPLSVFSHYLEKKL 216



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 35/67 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           IL G   T  +A   +I + + G ++G      ++L+  ICR+Y+E  R IP L  +F +
Sbjct: 13  ILQGVFITLQIALIAIIFSCLFGFILGYLMTLKSRLLRGICRLYLESIRIIPILAWLFII 72

Query: 149 YKSVLSV 155
           Y    SV
Sbjct: 73  YFGFSSV 79


>gi|241554176|ref|YP_002979389.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863482|gb|ACS61144.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 241

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 81/178 (45%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL + T LI  +P L+LI   Y    D                  F++    L     A+
Sbjct: 62  LLDLYTTLIRAVPELILIVGLYYAGTDGLNRLLAALELPPVNVNGFVAAVAVLGFVQGAY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E++R  ++A+P GQ+EAA A G+      R VLLP  + + +P L + ++++ K+S+L
Sbjct: 122 MTEVLRGAILAIPVGQIEAAKAFGMGPVLRFRRVLLPALLPNALPGLANLWMSVTKDSAL 181

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              VG+ +L          T       L    +YL+++++  +    + A++   + +
Sbjct: 182 VAVVGYQELALATRLAGASTKHYFVFFLASALLYLAITLVSNVVFKLIEARVRRGQPR 239


>gi|326803173|ref|YP_004320991.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651192|gb|AEA01375.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 233

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 97/220 (44%), Gaps = 9/220 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      +     + +    LG +++L   R     ++       LL I    + G+P +
Sbjct: 16  LQAVPRVLLLALVVLILGIGLGSLITLVRRRRIPIVNQ-------LLEIFISYMRGVPLI 68

Query: 236 VLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           V + +      +     +    F    +  P  + + +A +   AA  +E +R  L AV 
Sbjct: 69  VHLFIIRYSLPNVAASFMNLLGFGMEPSEFPNILLIIVAFTLLEAAIESENIRGALNAVS 128

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           + Q+EAA+++G+T +++ + ++ PQA+   IP   + YL  +K  SLA  VG  D+++  
Sbjct: 129 KDQVEAALSIGMTKKQSLQRIIFPQALTVAIPLFLNAYLKAIKIQSLAFTVGVVDILTQA 188

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 +   +E  L    +Y  +  ++ +  + L+ KI+
Sbjct: 189 RFAAALSYHYLESYLTAALVYWLICGLLQVVFDHLSQKIS 228


>gi|238749314|ref|ZP_04610819.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
 gi|238711969|gb|EEQ04182.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
          Length = 240

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 2/208 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S   G++L+L    + + F  +    L       F    L   L+LI     
Sbjct: 26  MTAKLFLLSVFPGLLLALI-MAVGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIYYGLS 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   ++  PR +  A  A 
Sbjct: 85  QFEIVQLGWQDDQPFWLLFRDATFCAVLALVLNTSAYVAELLAGMMVTFPRQEWVAGEAF 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+T  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V       T   
Sbjct: 145 GMTQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARAFYAATYSP 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
               L+   +YL  + ++    +R   +
Sbjct: 205 FIPFLMAAALYLLCTFILIFLFSRAEKR 232



 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 50/148 (33%), Gaps = 2/148 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    + P  ++  ++  G+    + +AW+ R     FR+ P  + +  +Y
Sbjct: 21  ITGLAMTAKLFLLSVFPGLLLALIMAVGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIY 80

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +     +            L         L +  N   +V   + G++++        
Sbjct: 81  YGLSQFEIVQLGWQDDQPFWLLFRDATFCAVLALVLNTSAYVAELLAGMMVTFPRQEWVA 140

Query: 210 --HFHEKTGKALPLLYISTFLIFGLPTL 235
              F     + +  L +   L  G+P L
Sbjct: 141 GEAFGMTQWQIIRRLVLPATLRRGIPAL 168


>gi|116070916|ref|ZP_01468185.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. BL107]
 gi|116066321|gb|EAU72078.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. BL107]
          Length = 324

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 14/240 (5%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           L    +    + L  G        +           +   S +L +   +    L R   
Sbjct: 86  LLWSGMAPFGLWLLAGGLGLAPVGTQSWGGFSLTLLLTAGSGMLALPFGVLL-ALGRRSD 144

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIA 272
               +    +YI            LIA+ +      P+     F+         +   +A
Sbjct: 145 LPVLRGSSTVYIELMRAVP-----LIAVLFFGQLLIPL-----FLPPGIELNRVLRAVVA 194

Query: 273 LSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYL 332
            + + AA+IAE VR GL A+   Q EAA+ LGL+ R+  +LV+LPQA R  +P LT+Q +
Sbjct: 195 FALFAAAYIAEDVRGGLQAISPTQREAAMVLGLSPRQTLQLVVLPQAFRVALPSLTNQAV 254

Query: 333 NLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
            LL+N+SL   +G  +L+ +  +++      G+ +E+ +    +Y      +AL    L 
Sbjct: 255 GLLQNTSLMAILGLVELLGISRSLLANPEFIGRYLEVYIWLAAVYWLACTAMALLARHLE 314



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 68/199 (34%), Gaps = 11/199 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF  T  L     + A   G L+  GR S   ++     VY+E+ R +P + V+FF    
Sbjct: 115 GFSLTLLLTAGSGMLALPFGVLLALGRRSDLPVLRGSSTVYIELMRAVPLIAVLFFGQLL 174

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV------FSFVLGIVL--SLF 203
           +   LP       +   +       +             +       + VLG+    +L 
Sbjct: 175 IPLFLPPGIELNRVLRAVVAFALFAAAYIAEDVRGGLQAISPTQREAAMVLGLSPRQTLQ 234

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVS 263
              L + F         L   +  L+     + ++ L   L   + +L    FIG     
Sbjct: 235 LVVLPQAFRVALPS---LTNQAVGLLQNTSLMAILGLVELLGISRSLLANPEFIGRYLEV 291

Query: 264 PEFMSLYIALSCYTAAFIA 282
             +++    L+C   A +A
Sbjct: 292 YIWLAAVYWLACTAMALLA 310


>gi|171778289|ref|ZP_02919495.1| hypothetical protein STRINF_00337 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282989|gb|EDT48413.1| hypothetical protein STRINF_00337 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 242

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 3/207 (1%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S +L    +LF   + R +  K      ++Y++   I   P ++LI   Y 
Sbjct: 33  PVTLGIMVVSILLSFFPALFL-AIGRIYKVKGVTTFSVIYLAF--IRSTPAILLILFFYS 89

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L                         Y+     T   ++EI+RS ++ V +GQ+EAA+A+
Sbjct: 90  LFPSLLNQFLKALGINIFELNPIYYAYVIFGLMTTGSLSEIIRSAILTVNKGQLEAALAI 149

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT ++A   ++ PQA+R  +P L +  +NL+K +SL   +   D+ ++           
Sbjct: 150 GLTAKQAYLRIVFPQAIRQALPNLCNLVINLVKGTSLVFVMTVKDITAIAKVEAAYGYHY 209

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNA 390
            E   +   IY+ +  +I      L  
Sbjct: 210 FESYFVIFIIYIVICGVIQYIFKFLEK 236



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L G   T  +    ++ +      +  GR+   K V     +Y+   R+ P +++I F Y
Sbjct: 29  LAGIPVTLGIMVVSILLSFFPALFLAIGRIYKVKGVTTFSVIYLAFIRSTPAILLILFFY 88

Query: 150 KSVLSV 155
               S+
Sbjct: 89  SLFPSL 94


>gi|328462992|gb|EGF34795.1| amino acid ABC transporter permease [Lactobacillus rhamnosus MTCC
           5462]
          Length = 136

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%)

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
              AA+ AEI R G  A+  GQ EA+  L +T  +A R V++PQ ++ ++P + ++ +NL
Sbjct: 1   MNYAAYFAEIFRGGFGAIDEGQFEASTVLNMTRWQALRFVVIPQVVKIVLPSIGNEVINL 60

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           +K+SSL   +G  DL+  G  I +     +  +++   IY
Sbjct: 61  VKDSSLVYVIGLGDLLRAGN-IASARDVTLLPLVLVGVIY 99


>gi|165977127|ref|YP_001652720.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877228|gb|ABY70276.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 222

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 18/232 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      +  +     +   A+I   S    +V       L R  +    +A+   Y+
Sbjct: 1   MGFDWLFEGQNAARLAQGLWLTAQISFISVGFSLVFGTLFGLLMRA-NNVFVRAVCRFYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T  I       ++   + L+F        +  G       F       + +  A + ++
Sbjct: 60  ETIRIVP-----ILVWLFALYFGLSTWFNLHISG-------FWVCIWVFTLWGVAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++K SSLA  +
Sbjct: 108 VRGALASIEKHQIESARALGLNRWQIFQYIELPQGTRRVLPGAINLFTRMVKTSSLAALI 167

Query: 345 GFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  ++V VG  II          +  +  +   +Y  +   ++LF  RL  K
Sbjct: 168 GVIEMVKVGQQIIENALLTNPSASFFVYGLIFILYFLICYPLSLFATRLEHK 219



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  + + GTL G    + N  V  +CR Y+E  R +P LV +F L
Sbjct: 15  LAQGLWLTAQISFISVGFSLVFGTLFGLLMRANNVFVRAVCRFYLETIRIVPILVWLFAL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  + +   +      +   +F          L     A I
Sbjct: 75  YFGLSTWFNLHISGFWVCIWVFTLWGVAEMGDLVRGALASI 115


>gi|261379485|ref|ZP_05984058.1| amino acid ABC transporter, permease protein [Neisseria subflava
           NJ9703]
 gi|284797945|gb|EFC53292.1| amino acid ABC transporter, permease protein [Neisseria subflava
           NJ9703]
          Length = 222

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L           +  + +   Y+ T  I       ++   + 
Sbjct: 24  QISLVSVAASCVLGTLFGLVL-----RSRNQLIRFIGRFYLETIRIVP-----ILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       + +  A + ++VR  L ++ + Q+E+ +AL
Sbjct: 74  LYFGLSVWTGIHIDG-------FWVCVWVFTMWGIAEMGDLVRGALESIEKHQVESGLAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+  +  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRGQVFRYIELPQSIRRVLPGAVNLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQK 219



 Score = 43.4 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+L+ +I R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLVSVAASCVLGTLFGLVLRSRNQLIRFIGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIDGFWVCVWVFTMW 99


>gi|260662189|ref|ZP_05863085.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
 gi|260553572|gb|EEX26464.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
          Length = 223

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 98/213 (46%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +  I V S   G+++      L R    +  + +  LY+  F I  +PT+VL+ L Y 
Sbjct: 23  WVSVWIAVVSLFFGLIVGTVFGVL-RTTKSRVLRFILRLYLEIFRI--IPTVVLLFLVYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +                   P      +A S + AA  ++IVR  + +VP+ Q E+ +A+
Sbjct: 80  I----------LPRQLHINMPADWMAVLAFSLWVAAEFSDIVRGAIQSVPQHQRESGLAI 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GLT  +  R +LLPQAM+  +P   +    ++K +SL + +   D+++VG  II      
Sbjct: 130 GLTRFQLFRYILLPQAMKLEVPAAINLATRVVKTTSLLMIISIMDVINVGQQIIEANNST 189

Query: 364 IE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +  F+Y  +  +++L+  +L A+
Sbjct: 190 YPTGVFWVYGLIFFLYFIVDYLLSLWARKLTAR 222



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 45/85 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +    I+GT+ G  R + ++++ +I R+Y+E+FR IP +V++F +
Sbjct: 18  LMGGLWVSVWIAVVSLFFGLIVGTVFGVLRTTKSRVLRFILRLYLEIFRIIPTVVLLFLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +   L I   +  +    F   
Sbjct: 78  YYILPRQLHINMPADWMAVLAFSLW 102


>gi|197104924|ref|YP_002130301.1| ABC-type amino acid transport system, permease component
           [Phenylobacterium zucineum HLK1]
 gi|196478344|gb|ACG77872.1| ABC-type amino acid transport system, permease component
           [Phenylobacterium zucineum HLK1]
          Length = 358

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 68/271 (25%), Positives = 103/271 (38%), Gaps = 26/271 (9%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIV-------------LPFGMFLNNRGLSFPTLTM 183
           R  P LV    L     S+ P      +             L FG F     ++      
Sbjct: 93  RWRPTLVCAVLLGLLAYSLRPAAWRPHLAALWAAALPGVLLLMFGGFAGLSYVATTMWGG 152

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   + + G         L R       + L +L+I       L +L+ IA    
Sbjct: 153 LPVTLILTVTAIGGAFPLAILLALGRRADLPVIRTLCVLFIEVTRAMPLLSLLFIASIML 212

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                  L    F         F + Y+A          E++R GL A+P GQ EAA AL
Sbjct: 213 PLLLPEPLLPDKFFRAMIALLLFAAAYLA----------EVIRGGLQALPPGQAEAARAL 262

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---T 360
           GL + +  R V+LPQA+  +IP LT+  + ++KN+SL + VG  DL+S G   +     +
Sbjct: 263 GLGYWRTQRFVVLPQALALVIPSLTNTIIVMIKNTSLVLVVGLFDLISSGRAALADPEWS 322

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             A+E  +    +Y +L      F   L  +
Sbjct: 323 SPAMETYIFIASVYFALCFGFGRFARALERR 353



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 31/66 (46%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
           AT +  G   T  L  + +  A  +  L+  GR +   ++  +C +++EV R +P L ++
Sbjct: 146 ATTMWGGLPVTLILTVTAIGGAFPLAILLALGRRADLPVIRTLCVLFIEVTRAMPLLSLL 205

Query: 146 FFLYKS 151
           F     
Sbjct: 206 FIASIM 211


>gi|222102299|ref|YP_002546889.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Agrobacterium radiobacter K84]
 gi|221728416|gb|ACM31425.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Agrobacterium radiobacter K84]
          Length = 237

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I  F+  L + + L   R SR        A P ++++ F I   P L  I   +  
Sbjct: 34  IYVAILGFAGALAVGIPLLMARRSRF----VLIAGPGIFLADF-IRSTPLLQQIYFYF-- 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F       + P   +  +AL+ +   F+AE  R+GL A+P GQ +A  ALG
Sbjct: 87  ---------FVLPQAGIILPPITTGILALAIHYGCFVAEAYRAGLEALPSGQRDAITALG 137

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            +   A R V++PQ +  +IP L +  +++ K + L  ++   D++ V         Q I
Sbjct: 138 FSRFAAYRHVIVPQLVPFLIPALGNLLVSIFKETPLLASIAVTDIMFVAMQYGADHFQYI 197

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           E I +   I+L +S+  +L + RL A ++
Sbjct: 198 EPITMCGLIFLVISLATSLIVRRLEAMVS 226


>gi|86360892|ref|YP_472779.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284994|gb|ABC94052.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 223

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 88/226 (38%), Gaps = 14/226 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      +        +    ++     VLGI L +F     R       K +   
Sbjct: 1   MSYHFEFSWLLQYYPEIIKGVLITLELIAIGGVLGISLGIF-CAWVRALGPAWLKPIVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  +A+     A+  
Sbjct: 60  YVELIRNTPFLI-------------QLFFIFFGLPSLGLHLSELTAANLAMVVNLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I P L+SQ + ++  S++  
Sbjct: 107 EIIRAGIQATPKGQFEAGESLAMTRFETFRHVVLVPSLQRIWPALSSQVVIVMLGSAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            +   DL      I ++T +A E  ++   IYL+L+I++   +  +
Sbjct: 167 QIAAEDLTFAANFIQSRTFRAFEAYIVSTSIYLALAILLRQVLGLI 212


>gi|237750380|ref|ZP_04580860.1| glutamine ABC transporter permease GlnP [Helicobacter bilis ATCC
           43879]
 gi|229373910|gb|EEO24301.1| glutamine ABC transporter permease GlnP [Helicobacter bilis ATCC
           43879]
          Length = 228

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 87/221 (39%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
               F            +  F   ++L+L  +          G    L+       F   
Sbjct: 5   HFWKFNDFLDMDFIVSILPLFWKALLLTLEISCYGIFGAILLGFIASLVLYYQIRPFVWI 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
           T + I +         +   +  +      P F    I +     +++AE  R GL +V 
Sbjct: 65  TRIYIEVSRNTPLIIHLFFLYFGLSYWIEIPNFWCAVIGVIFLGGSYMAESFRLGLESVR 124

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             Q+E+A++LG +  +  R V+ PQ++   IP + +  L L+K +S+   +   DL+S+ 
Sbjct: 125 HSQIESALSLGFSKMQILRYVIFPQSIPLSIPSICANVLFLIKETSIVGVIALQDLMSIA 184

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +I+  GQ  E + + +  YL + + ++   ++L      
Sbjct: 185 KEVISNYGQTNEALFLLIVAYLIVLLPLSFIFSKLEHHYRR 225



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 58/153 (37%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S         + T  ++  G+  A ++G +         +   WI R+Y+EV RN P ++
Sbjct: 20  SILPLFWKALLLTLEISCYGIFGAILLGFIASLVLYYQIRPFVWITRIYIEVSRNTPLII 79

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF 203
            +FFLY  +   + IP+    +   +FL    ++        + +       L +  S  
Sbjct: 80  HLFFLYFGLSYWIEIPNFWCAVIGVIFLGGSYMAESFRLGLESVRHSQIESALSLGFSKM 139

Query: 204 ATRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
                  F +    ++P +  +   +    ++V
Sbjct: 140 QILRYVIFPQSIPLSIPSICANVLFLIKETSIV 172


>gi|307248742|ref|ZP_07530755.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307250983|ref|ZP_07532909.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306854669|gb|EFM86859.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306857011|gb|EFM89141.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 222

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A+I   S  L ++       L R  +    +A+   Y+ T  I       ++   + 
Sbjct: 20  WLTARISFISVGLSLIFGTLFGLLMRA-NNVFVRAVCRFYLETIRIVP-----ILVWLFA 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F        +  G       F       + +  A + ++VR  L ++ + Q+E+A AL
Sbjct: 74  IYFGLSTWFNLHISG-------FWVCIWVFTLWGVAEMGDLVRGALASIEKHQIESARAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL   +  + + LPQ  R ++P   + +  ++K SSLA  +G  ++V VG  II      
Sbjct: 127 GLNRWQIFQHIELPQGTRRVLPGAINLFTRMVKTSSLAALIGVIEMVKVGQQIIENALLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y  +   ++LF  RL  K
Sbjct: 187 NPSASFFVYGLIFILYFLICYPLSLFATRLEHK 219



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  + I GTL G    + N  V  +CR Y+E  R +P LV +F +
Sbjct: 15  LAQGLWLTARISFISVGLSLIFGTLFGLLMRANNVFVRAVCRFYLETIRIVPILVWLFAI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  + +   +      +   +F          L     A I
Sbjct: 75  YFGLSTWFNLHISGFWVCIWVFTLWGVAEMGDLVRGALASI 115


>gi|305663951|ref|YP_003860239.1| polar amino acid ABC transporter, inner membrane subunit
           [Ignisphaera aggregans DSM 17230]
 gi|304378520|gb|ADM28359.1| polar amino acid ABC transporter, inner membrane subunit
           [Ignisphaera aggregans DSM 17230]
          Length = 224

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 96/230 (41%), Gaps = 10/230 (4%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           +  G+ +           + +     +   + G +L+     +           + L+  
Sbjct: 1   MDNGLSVTMNTFLPYVYVIMSGIVNTLILSITGFILATVLGLIFSFIEIYGPNIISLIID 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I     LVL+   + + +  P L               +S  + +    +A+ A++
Sbjct: 61  WMLRIIRGIPLVLML--FIIFYGLPQL--------GIRFSPIVSAILGIGIIDSAYQAQL 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R  +I V   Q+EAA ++GL+   A R +++PQA R  +P   +++  +LK+SS+A A+
Sbjct: 111 FRGIIITVSERQLEAAYSIGLSTWNAFRYIVIPQAFRIALPAWINEFSIVLKDSSMAYAI 170

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           G  ++ +    + N T   +  ++    IY  +   ++   N L+ K++L
Sbjct: 171 GVTEIFTQAIHVANATMDYLTPLVFVSIIYFLICYPLSQLSNHLHKKLSL 220



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 40/86 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   I+ G VNT  L+ +G I AT++G +     +    +++ I    + + R IP ++
Sbjct: 14  PYVYVIMSGIVNTLILSITGFILATVLGLIFSFIEIYGPNIISLIIDWMLRIIRGIPLVL 73

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++F ++  +  +       +    G+
Sbjct: 74  MLFIIFYGLPQLGIRFSPIVSAILGI 99


>gi|170781634|ref|YP_001709966.1| putative glutamate permease [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156202|emb|CAQ01344.1| putative glutamate permease [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 274

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 6/178 (3%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           G  L LL +S   +      V++    +     PVL    FI        + S+  AL+ 
Sbjct: 84  GMVLALLRMSEHRVIRYAVTVVL----EFFRGMPVLLMMLFIYLIFPIGPYWSVVTALTL 139

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y  A I E +RSG++ +PRGQ EA +A+GL   +   LV  PQA R+++P + +Q + L+
Sbjct: 140 YNGAIIGEALRSGILGLPRGQREAGLAIGLRPLQNRLLVEFPQAFRTMLPIIVAQLVVLI 199

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           K+++L   V    L   G  I+  T +A  + I ++ + +YL L++ ++    RL  K
Sbjct: 200 KDTALGTIVSLVGLTKQGELILEATSRANSLPIFVVMVGMYLVLNLSVSTIARRLARK 257


>gi|269956044|ref|YP_003325833.1| polar amino acid ABC transporter inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
 gi|269304725|gb|ACZ30275.1| polar amino acid ABC transporter, inner membrane subunit
           [Xylanimonas cellulosilytica DSM 15894]
          Length = 294

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 114/253 (45%), Gaps = 15/253 (5%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V  + L                           L     T+   A   V + + G++   
Sbjct: 32  VAAWALIILAQRGQLDAGLWRTATDARAWEFYYLPGLRNTLQAAAVATVGAVLFGVLFG- 90

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R  H +  + +  + +  F       ++L+ +   + F          + G   
Sbjct: 91  ----MGRLSHLRAVRWISSVVVEFFRAVP---VLLMMVFLNVFFGV-------VLRGLVP 136

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              + ++ +AL  Y  A IAE+VRSG++ +PRGQ EA ++LGLT  +  R + LPQA+ +
Sbjct: 137 DSAYAAVVVALVLYNGAVIAELVRSGVVNLPRGQSEAGLSLGLTQGQTLRSIQLPQALIA 196

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
           ++P + SQ + +LK+S+L   +G+ DL+     + +  G  ++ + +   +++ +++ ++
Sbjct: 197 MLPAVISQLVVVLKDSALGQLIGYTDLLRSAQVLASGGGNPLQTLFVVAVLFILVNMGLS 256

Query: 383 LFMNRLNAKIALK 395
              +RL+ +++ +
Sbjct: 257 WVAHRLSRRLSSR 269



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 35/73 (47%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
           T   ++    L G  NT   A    + A + G L G GRLS  + V WI  V VE FR +
Sbjct: 55  TDARAWEFYYLPGLRNTLQAAAVATVGAVLFGVLFGMGRLSHLRAVRWISSVVVEFFRAV 114

Query: 140 PPLVVIFFLYKSV 152
           P L+++ FL    
Sbjct: 115 PVLLMMVFLNVFF 127


>gi|52425741|ref|YP_088878.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307793|gb|AAU38293.1| ArtM protein [Mannheimia succiniciproducens MBEL55E]
          Length = 222

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 22/210 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F+ +LGIV+ +              +    LY+    I       L+A+ + ++F
Sbjct: 27  FVSVFFACILGIVMGVVM-----TSRNIFVRGFCRLYLEIVRIIP-----LLAILFIVYF 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                   +  G +          +    +  A + ++VR  L ++ + Q EAA ALGL+
Sbjct: 77  GVAKWFNVHLSGVTVC-------ILVFIFWGTAEMGDLVRGALTSIEKHQTEAAYALGLS 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG----- 361
             +    +LLPQ+++ + P   + +  ++K SSLA+ +G  +++ VG  II  +      
Sbjct: 130 KIQTFIYILLPQSLKRVTPGAINLFTRMIKTSSLAMLIGVLEVIKVGQQIIETSLFRDPT 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            A+ I  +   +Y ++   ++LF   L  +
Sbjct: 190 SALWIYGVIFALYFAICYPLSLFSKYLEKR 219



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +AF  +  A I+G ++G    S N  V   CR+Y+E+ R IP L ++F +
Sbjct: 15  LLAGLGITAEIAFVSVFFACILGIVMGVVMTSRNIFVRGFCRLYLEIVRIIPLLAILFIV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  V     +    + +   +F+  
Sbjct: 75  YFGVAKWFNVHLSGVTVCILVFIFW 99


>gi|303249934|ref|ZP_07336136.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650997|gb|EFL81151.1| putative ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 225

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 94/235 (40%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              + F      +  +     +   A+I   S  L +V       L R  +    +A+  
Sbjct: 1   MQNMGFDWLFEGQNAARLAQGLWLTAQISFISVGLSLVFGTLFGLLMRANNVLV-RAVCR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            Y+ T  I       ++   + ++F        +  G       F       + +  A +
Sbjct: 60  FYLETIRIVP-----ILVWLFAIYFGLSTWFNLHISG-------FWVCIWVFTLWGIAEM 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++VR  L+++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++K SSLA
Sbjct: 108 GDLVRGTLVSIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPRAINLFTRMVKTSSLA 167

Query: 342 VAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +G  ++V VG  II          +  +  +   +Y  +   ++LF  RL  K
Sbjct: 168 ALIGVIEIVKVGQQIIENALLTNPSASFFVYGLIFILYFLICYPLSLFATRLEHK 222



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 41/101 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  + + GTL G    + N LV  +CR Y+E  R +P LV +F +
Sbjct: 18  LAQGLWLTAQISFISVGLSLVFGTLFGLLMRANNVLVRAVCRFYLETIRIVPILVWLFAI 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  + +   +      +   +F          L   T   I
Sbjct: 78  YFGLSTWFNLHISGFWVCIWVFTLWGIAEMGDLVRGTLVSI 118


>gi|326771647|ref|ZP_08230932.1| glutamate transport system permease protein GluD [Actinomyces
           viscosus C505]
 gi|326637780|gb|EGE38681.1| glutamate transport system permease protein GluD [Actinomyces
           viscosus C505]
          Length = 286

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 25/236 (10%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                 G  + ++ L     T+       V +F LGI L        R    +  K L  
Sbjct: 68  KWRYFLGQSVVSQLLEAAGTTLTLGGVAAVLTFPLGIALGWL-----RLLDNRPIKWLIG 122

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           L+I       +  LV   L     F                  +F  L + +   T+A  
Sbjct: 123 LWIDAMRAVPMLLLVYFFLLVVPRFAT--------------ISDFWKLALPIVMCTSATT 168

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ RSG+ A+ RGQ EAA ALG++     RL+L PQA+R ++P L +Q + ++K ++LA
Sbjct: 169 AEVFRSGVRALDRGQTEAAWALGMSPSLTMRLILAPQALRLMLPTLITQMVTIIKGTTLA 228

Query: 342 VAVGFADLVSVGGTIINQT------GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             + + +L+  G T+I Q           +  +I   +Y+ ++  +      + ++
Sbjct: 229 YVLAYPELMYRGSTMIGQAKIDAHLSVFFQTYVIIAVLYIIVNWSLGALARYIESR 284


>gi|319943776|ref|ZP_08018057.1| glutamine/glutamate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
 gi|319743009|gb|EFV95415.1| glutamine/glutamate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
          Length = 220

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 13/186 (6%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
           +  +   +L  +YI   L    P L+ +   Y                       F    
Sbjct: 44  YRVRPFDSLARVYIE--LSRNTPLLIQLFFLYY-----------GLPKIGIHWDGFTCGV 90

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           IAL+    +++AE +R+GL AVPRGQ+E+A A+GL   +  R V+LPQA+   +P LT+ 
Sbjct: 91  IALTFLGGSYMAEALRAGLQAVPRGQVESARAIGLRRAQILRHVVLPQALAIALPALTAN 150

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            L L+K +S+  AV  A+L+ V   II       E + + +  YL L + ++     +  
Sbjct: 151 ALFLVKETSVINAVSVAELLFVTKDIIGTDYMTNEALFMLLVSYLVLLLPLSWLAAWVEK 210

Query: 391 KIALKE 396
           ++   E
Sbjct: 211 RMRRAE 216


>gi|304395108|ref|ZP_07376992.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357361|gb|EFM21724.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 230

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 5/223 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+     +F+ S +LG + +    R          + L ++Y   F    +
Sbjct: 12  WSILDAVPVTLLMAVTVFICSTLLGGLFAFIEHR-----RMPVLRQLVIIYKIAFKGVPM 66

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             ++ +A          V         +   P ++ + +ALS   AAF AE+ +  L + 
Sbjct: 67  VVVIFLAYYGLPPALHFVATLLGVEVNAHSLPNWVIIIVALSACVAAFQAEVWKGALNSF 126

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ +AA++LG +  +  R V+ PQ + + IP L + ++ ++K  SLA A+   D+ + 
Sbjct: 127 DNGQSDAALSLGYSGGQLFRRVMFPQIIVAAIPDLANAFMVIMKALSLAFAIEVVDIFAQ 186

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                      +E  LI +  Y+ ++ ++    +R+ A + ++
Sbjct: 187 AQLTAALNFYYLEAFLIAVVFYMVIAYLVTRIADRIEAALRVR 229


>gi|299069941|emb|CBJ41225.1| putative amino-acid ABC transporter protein [Ralstonia solanacearum
           CMR15]
          Length = 210

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 11/210 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            K+      +GI L + A  L+   +    ++L    ++   +  +  +  + L Y   F
Sbjct: 6   LKVTAVVSAIGIPLGVLAGTLAA--YASRLRSLAPACLARSYVATVRNVPYLILVYLSFF 63

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L           +          + YT  +  EI+R+ L +VPRGQ  AA++LG++
Sbjct: 64  GLPKL--------GVAASAMAVAIGCTALYTGGYFCEILRAALHSVPRGQSGAALSLGMS 115

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R ++ PQ +  +IPP TS  + + K+S++   +   ++      +   T    EI
Sbjct: 116 RWQVQRYIVGPQLLGFLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAYTEI 175

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     IY   S+++A     L   +A + 
Sbjct: 176 LAATAAIYWLTSVLLAAAGRSLE-HLARRR 204



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 9/183 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++  G+    + GTL        +   A + R YV   RN+P L++++  
Sbjct: 2   LLRGLKVTAVVSAIGIPLGVLAGTLAAYASRLRSLAPACLARSYVATVRNVPYLILVYLS 61

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           +  +  +        V      L   G     L    ++     S   G  LSL  +R  
Sbjct: 62  FFGLPKLGVAASAMAVAIGCTALYTGGYFCEILRAALHSVPRGQS---GAALSLGMSRWQ 118

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              +    + L       FLI    +LV++  K    F    L +  +      +  F  
Sbjct: 119 VQRYIVGPQLLG------FLIPPTTSLVIMMFKDSAIFSVMSLPEMTYQSNLLTANTFAY 172

Query: 269 LYI 271
             I
Sbjct: 173 TEI 175


>gi|254456576|ref|ZP_05070005.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083578|gb|EDZ61004.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuC
           [Candidatus Pelagibacter sp. HTCC7211]
          Length = 223

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 15/212 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T  K+ V S +L I++SL    L R       +    +YI  F   G   LV +   Y +
Sbjct: 20  TTIKVLVCSTILYIIISLIFG-LMRLSKNPLIQGTATVYIEFF--RGTSLLVQLFWFYYV 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                      F G +     F +  +A+     A+ AEIVR G++AVP+GQ E A AL 
Sbjct: 77  ---------LPFFGLTLE--AFTAGVVAIGMNFGAYGAEIVRGGILAVPKGQWEGAFALN 125

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
            T  K  R +++PQ    I+PP  +  + LLK ++L   V   DL      I + T  + 
Sbjct: 126 FTPAKRMRKIIIPQIFPIILPPAANLTVELLKATALVALVTVVDLTFEAKQINSITWLSA 185

Query: 365 EIILIWMFIYLSLS-IMIALFMNRLNAKIALK 395
           +     + IY  +S   +  F+  L    A K
Sbjct: 186 QCFGTALLIYYIISRFFLVPFLRWLEVLAARK 217



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 33/71 (46%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
           S +   +L+G V T  +     I   II  + G  RLS N L+     VY+E FR    L
Sbjct: 8   SEHGPTMLLGTVTTIKVLVCSTILYIIISLIFGLMRLSKNPLIQGTATVYIEFFRGTSLL 67

Query: 143 VVIFFLYKSVL 153
           V +F+ Y  + 
Sbjct: 68  VQLFWFYYVLP 78


>gi|53728920|ref|ZP_00348272.1| COG0765: ABC-type amino acid transport system, permease component
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209156|ref|YP_001054381.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae L20]
 gi|190151022|ref|YP_001969547.1| amino acid ABC transporter permease [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|126097948|gb|ABN74776.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae serovar 5b str. L20]
 gi|189916153|gb|ACE62405.1| putative ABC transporter, permease protein, amino acid
           [Actinobacillus pleuropneumoniae serovar 7 str. AP76]
          Length = 222

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 92/232 (39%), Gaps = 18/232 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      +  +  +  +   A+I   S    +V       L R  +    +A+   Y+
Sbjct: 1   MGFDWLFEGQNAARLSQGLWLTAQISFISVGFSLVFGTLFGLLMRA-NNILVRAVCRFYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T  I       ++   + L+F        +  G       F       + +  A + ++
Sbjct: 60  ETIRIVP-----ILVWLFALYFGLSTWFNLHISG-------FWVCIWVFTLWGVAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L ++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++K SSLA  +
Sbjct: 108 VRGALASIEKHQIESAKALGLNRWQIFQYIELPQGTRRVLPGAINLFTRMVKTSSLAALI 167

Query: 345 GFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  ++V VG  II          +  +  +   +Y  +   ++L   RL  K
Sbjct: 168 GVIEMVKVGQQIIENALLTNPSASFFVYGLIFILYFLICYPLSLLATRLEHK 219



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 40/98 (40%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++F  +  + + GTL G    + N LV  +CR Y+E  R +P LV +F LY  
Sbjct: 18  GLWLTAQISFISVGFSLVFGTLFGLLMRANNILVRAVCRFYLETIRIVPILVWLFALYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           + +   +      +   +F          L     A I
Sbjct: 78  LSTWFNLHISGFWVCIWVFTLWGVAEMGDLVRGALASI 115


>gi|170738480|ref|YP_001767135.1| polar amino acid ABC transporter inner membrane subunit
           [Methylobacterium sp. 4-46]
 gi|168192754|gb|ACA14701.1| polar amino acid ABC transporter, inner membrane subunit
           [Methylobacterium sp. 4-46]
          Length = 248

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 1/228 (0%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  L      +         ++ +   V  I++SL    L         + L  L     
Sbjct: 16  GFNLTVFYDPYDWGRYVAGLRMTLLLSVSTILISLVLGALGALLQGGPSRLLRGLVHGFV 75

Query: 228 LIF-GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           ++F   P LV I   Y          Q        +        ++LS + AAF  EI R
Sbjct: 76  VVFRNTPPLVQIFFFYFGLGTLLPATQTASGLREPLLSNVQWAIVSLSLFAAAFNVEIFR 135

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           SG+ AVPR  +EAA ALG T  KA   V+LP A+R  +P L +  +NLLK ++LA A+  
Sbjct: 136 SGIEAVPRTTVEAAEALGYTRAKAYLHVVLPLALRICLPALNNNLINLLKTTTLAYAIAV 195

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            + +     I +++   +E++L+ +  Y  L  ++   M+R    + +
Sbjct: 196 PETLYAVKQIWSESQNVLEMMLVLLATYGILVGILVWLMHRWERALRI 243



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 5/137 (3%)

Query: 56  NLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVG 115
            +      L +  GF +     PY     +    + G   T  L+ S ++ + ++G L  
Sbjct: 3   GIPDWFQRLYDTTGFNLTVFYDPYD----WGRY-VAGLRMTLLLSVSTILISLVLGALGA 57

Query: 116 AGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRG 175
             +   ++L+  +   +V VFRN PPLV IFF Y  + ++LP    +  L   +  N + 
Sbjct: 58  LLQGGPSRLLRGLVHGFVVVFRNTPPLVQIFFFYFGLGTLLPATQTASGLREPLLSNVQW 117

Query: 176 LSFPTLTMDTNAKIFVF 192
                        + +F
Sbjct: 118 AIVSLSLFAAAFNVEIF 134


>gi|269796951|ref|YP_003316406.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
 gi|269099136|gb|ACZ23572.1| amino acid ABC transporter membrane protein [Sanguibacter keddieii
           DSM 10542]
          Length = 216

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 14/222 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L            + V S  L +V         R    ++ +     Y+       L TL
Sbjct: 8   LPRIWQGFQLTLFLAVVSGALSLVFGTILAAF-RVAPLRSLRTFAGAYVEVARNTPL-TL 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V I   + L              G  +    +   IAL+ YT+AF+ E VRSG+ +V  G
Sbjct: 66  VFIFFVFVLPSL-----------GFILPLGRVPAIIALTAYTSAFVCEAVRSGINSVAVG 114

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA A+GL   +   LV+LPQA+R+++PPL +  + L KN+S+A      +L S    
Sbjct: 115 QAEAARAIGLGTVQTLSLVVLPQALRTVVPPLINVLIALTKNTSVAAGFAVVELTSTSRA 174

Query: 356 IINQT-GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +        + ++      YL ++I   +  N +  K+    
Sbjct: 175 LARDNPADVVLLLTGIAVCYLVITIPAGIAANAIERKVVFSR 216



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 32/67 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  GF  T +LA      + + GT++ A R++  + +      YVEV RN P  +V  F 
Sbjct: 11  IWQGFQLTLFLAVVSGALSLVFGTILAAFRVAPLRSLRTFAGAYVEVARNTPLTLVFIFF 70

Query: 149 YKSVLSV 155
              + S+
Sbjct: 71  VFVLPSL 77


>gi|139439417|ref|ZP_01772858.1| Hypothetical protein COLAER_01878 [Collinsella aerofaciens ATCC
           25986]
 gi|133775196|gb|EBA39016.1| Hypothetical protein COLAER_01878 [Collinsella aerofaciens ATCC
           25986]
          Length = 212

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 26/222 (11%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                   T++ +A    FS + G VL+L      + +  +  + L   YI  F     P
Sbjct: 11  YIWGGFVKTIEISALSIFFSLIFGTVLALV-----KSYAPRPFRILVSAYIELF--RCTP 63

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            L+ I   Y       ++                   IA + +T+A +AEIVR GL ++P
Sbjct: 64  NLLWILFIYFTVQGLDIVIS----------------TIAFTLFTSAVMAEIVRGGLNSIP 107

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           RGQ EAA + G       R ++LPQ  ++IIP L SQ   ++K+SS    +  A+L+   
Sbjct: 108 RGQFEAAQSQGFGFFATMRYIILPQTFKTIIPALFSQCTTVIKDSSYLSGINVAELMYTA 167

Query: 354 GTIINQT---GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             ++       Q + +  +   +Y  L+  I+L +     ++
Sbjct: 168 NVVMAHAIDLSQVLMLYGLVFAMYFVLNFGISLLVRAYQRRM 209



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    I  GFV T  ++   +  + I GT++   +  A +    +   Y+E+FR  P L+
Sbjct: 7   TNLLYIWGGFVKTIEISALSIFFSLIFGTVLALVKSYAPRPFRILVSAYIELFRCTPNLL 66

Query: 144 VIFFLYK 150
            I F+Y 
Sbjct: 67  WILFIYF 73


>gi|227432936|ref|ZP_03914878.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351282|gb|EEJ41566.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 240

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 105/237 (44%), Gaps = 12/237 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F + +    L +  +T+       +FS +LG +++  + +LSR    +T      
Sbjct: 3   PFSFKFFLSVFGEVLPYFPVTLLIIVTSIIFSSLLGALVA--SGQLSRSPIWRTLSQ--- 57

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
                F++   P +VL+ L +   +  P L   +         + + + IALS   A+ +
Sbjct: 58  --GYVFVLRSTPPIVLLFLVF---YGLPKLLLLSLNININDWQKSIFVIIALSLLFASNL 112

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE+ +S  ++V  GQ EAA+ +GL+  +    + LPQ +   +P   +    L+K+++LA
Sbjct: 113 AEVFKSAYLSVNTGQREAALMVGLSEWQTFYRITLPQTIVVALPNFANTVAALIKDAALA 172

Query: 342 VAVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +G  D++  G  +I++     ++E  L    IY  L ++I      L   +    
Sbjct: 173 YVIGLLDMMGAGDNLISRNFGHHSLETYLALAIIYWILFVIIEQGAKYLEIYLGKSR 229



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 35/56 (62%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           T  +  + +I ++++G LV +G+LS + +   + + YV V R+ PP+V++F ++  
Sbjct: 23  TLLIIVTSIIFSSLLGALVASGQLSRSPIWRTLSQGYVFVLRSTPPIVLLFLVFYG 78


>gi|254302675|ref|ZP_04970033.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148322867|gb|EDK88117.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 240

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 13/180 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  K + + YI   L    P LV +   + L+F  P +       G   SPE     I L
Sbjct: 68  KFFKKIVIGYIE--LSRNTPLLVQL---FFLYFGLPKV-------GLRFSPE-ACGIIGL 114

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +    +++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT+  + 
Sbjct: 115 TFLGGSYMIETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIF 174

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK +S+  A+   D++ V   +I    +  E + + +  YL + + ++L    L  K+ 
Sbjct: 175 LLKETSVFSAISLMDMMFVTRDLIGLYYKTEESLFMLVVGYLIILLPLSLLGVWLERKLK 234


>gi|289177407|gb|ADC84653.1| GlnP [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 230

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 18/215 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   S  L I L L    L       T +   + ++    +  +  +  +AL + 
Sbjct: 27  WVTIWIAAVSVGLSIPLGLLCGWLM------TLRNPVIRFVMRVYLDFIRIMPQLALLFI 80

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +    +  +N            S       +  A + ++VR  L ++P+ Q E +  L
Sbjct: 81  AFYGIARMSNWN-------MDATASCVFVFVLWGGAELGDLVRGALQSIPQIQYETSYML 133

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +A   V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  II+     
Sbjct: 134 GLSNWQAFVHVILPQAVRRLLPGAVNLSTRIVKTTSLAVLLGVVEVIKVGQQIIDANRFQ 193

Query: 364 IE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  +  +   +Y  +   ++L  + L  + A
Sbjct: 194 YPTGTLWVYGVIFLMYFIVCWPLSLVAHALEKRWA 228



 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W+A   +  +  +G L G      N ++ ++ RVY++  R +P L ++F  
Sbjct: 22  LLQGLWVTIWIAAVSVGLSIPLGLLCGWLMTLRNPVIRFVMRVYLDFIRIMPQLALLFIA 81

Query: 149 YKSVLSVLPI 158
           +  +  +   
Sbjct: 82  FYGIARMSNW 91


>gi|317049496|ref|YP_004117144.1| polar amino acid ABC transporter inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316951113|gb|ADU70588.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 230

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 9/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+     +F+ S ++G + +        H      + L L Y   F   G+
Sbjct: 12  WSILDAVPVTLAMAITVFICSTLIGGLFAYVE-----HQRLPVLRQLVLAYKIAF--KGV 64

Query: 233 PTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           P +V+I L Y         V   F     +   P ++ + +ALS   AAF AE+ +  L 
Sbjct: 65  PMVVVIFLAYYGLPPALHFVATLFGIEVNAHSLPNWVIIIVALSACVAAFQAEVWKGALN 124

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +   GQ +AA +LG T+ +  R V+ PQ + + IP L + ++ ++K  SLA A+   D+ 
Sbjct: 125 SFDSGQSDAAQSLGYTNGQLFRRVMFPQIIVAAIPDLANAFMVIMKALSLAFAIEVVDIF 184

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +            +E  LI +  Y+ ++ ++    + + AK+ L+
Sbjct: 185 AQAQLTAALNFYYLEAFLIAVVFYMVIAWLVTKIADIIEAKLRLR 229


>gi|238798539|ref|ZP_04642017.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
 gi|238717626|gb|EEQ09464.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           mollaretii ATCC 43969]
          Length = 198

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 15/208 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M     I + + ++G +       L RH                ++I G P L  +A+ Y
Sbjct: 1   MGVTLGISLSAAIIGALAGFMLHALCRHHPWLYWPWR----TYVWIIRGTPYLAQLAVFY 56

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F             +  I+L+ Y+AA+  EI R+   ++ +GQ+EAA  
Sbjct: 57  -----------FGLPAIGVTLTAVEATVISLAIYSAAYFGEIFRTAWKSLGQGQLEAAQV 105

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
             ++   +   +  PQA+R  +P L +Q++  +K S++A  +   +L    G I+  T  
Sbjct: 106 HDISAWNSFWHIQTPQALRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQIVANTYT 165

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNA 390
            I    + +  Y  L+  I++ +  L+ 
Sbjct: 166 YIVPYTLLILSYWLLAQGISVSVRLLSR 193


>gi|237745209|ref|ZP_04575690.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
 gi|229432438|gb|EEO42650.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
          Length = 219

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 13/180 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           K  K + + YI   L    P LV +   + L+F  P +       G   SPE +   I L
Sbjct: 47  KFFKQIIVGYIE--LSRNTPLLVQL---FFLYFGLPKV-------GLRFSPE-ICGIIGL 93

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +    +++ E  RS L  + + Q E+A++LG+T  +  R V+LPQ+    +P LT+  + 
Sbjct: 94  TFLGGSYMIETFRSALETIDKIQKESALSLGMTKWQTMRYVILPQSFVISLPGLTANIIF 153

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           LLK +S+  A+   D++ V   +I    +  E + + +  YL + + ++L    L  K+ 
Sbjct: 154 LLKETSVFSAISLMDMMFVAKDLIGLYYKTEESLFMLIVGYLIILLPLSLLGVWLERKLK 213


>gi|193083902|gb|ACF09581.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote KM3-72-G3]
          Length = 564

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 91/233 (39%), Gaps = 19/233 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  +         + +       V  F +G+VL+         F   +   + L+     
Sbjct: 340 GDGIEASQWGGLFVNLIVATAGCVLGFGIGVVLAFGRQSDQPFFSVPSIALIELVRSGPL 399

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +         L + +     ++  F        + + M + +    +   +IAE++R 
Sbjct: 400 ICW---------LWFAVFLMPDLMDPFY------NAEDIMRMLLMFGIFGGCYIAEVLRG 444

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL AV  GQ EAA+ALGL+  +    V LP A+R+ +P + S ++ L K+++L   +   
Sbjct: 445 GLQAVDSGQKEAALALGLSPFQTKMQVELPNAVRTTLPSIVSVFIGLWKDTTLLFIINIL 504

Query: 348 DLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           D   +   +        G  +E + +   ++   +  ++    ++   + L  
Sbjct: 505 DFFKLAKDLPATDLRFLGNFLEPLYVTALVFWVFAFYLSRISMKIEKGLGLVR 557



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 76/216 (35%), Gaps = 8/216 (3%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G      +A +G +    IG ++  GR S     +      +E+ R+ P +  ++F    
Sbjct: 350 GLFVNLIVATAGCVLGFGIGVVLAFGRQSDQPFFSVPSIALIELVRSGPLICWLWFAVFL 409

Query: 152 VLSVL-PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLFATRL 207
           +  ++ P  +   ++   +     G  +    +    +          L + LS F T++
Sbjct: 410 MPDLMDPFYNAEDIMRMLLMFGIFGGCYIAEVLRGGLQAVDSGQKEAALALGLSPFQTKM 469

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVL---IALKYQLHFDKPVLGQFNFIGGSTVSP 264
                      LP +      ++   TL+    I   ++L  D P      F+G      
Sbjct: 470 QVELPNAVRTTLPSIVSVFIGLWKDTTLLFIINILDFFKLAKDLPATD-LRFLGNFLEPL 528

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              +L   +  +  + I+  +  GL  V  G  EAA
Sbjct: 529 YVTALVFWVFAFYLSRISMKIEKGLGLVREGGGEAA 564


>gi|34496728|ref|NP_900943.1| glutamine transport system permease [Chromobacterium violaceum ATCC
           12472]
 gi|34102583|gb|AAQ58948.1| glutamine transport system permease protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 227

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 8/176 (4%)

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L  + T +   L  + ++ L +  +F  P+L   +        P  +++ +AL+   +A
Sbjct: 57  ALRRMLTAITAVLRAIPVLMLIFWCYFLLPLLFGVDI-------PGLLTVILALALIHSA 109

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           ++ + V +GL AV RGQ  A +ALG +  +  R ++LPQA+R ++P   +Q+++LLK+SS
Sbjct: 110 YLGQAVLAGLTAVGRGQWHAGLALGFSRWQTLRWLILPQALRIMLPSFINQWVSLLKDSS 169

Query: 340 LAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           LA  VG A+   V   + N+     +EI       YL L  ++ L  +    +   
Sbjct: 170 LAYIVGVAEFTFVATQVNNREQVYPLEIFSAIAIGYLLLCGLLQLAGHLAERRWRR 225


>gi|134098326|ref|YP_001103987.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133910949|emb|CAM01062.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 212

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 17/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V S VLG +L+       R       +A+   Y++         L L+   +  
Sbjct: 18  LFLLAGVGSLVLGTLLATL-----RVSPVPALRAVGTGYVTLLRNTP---LTLVFFFFVF 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            + K  L QF F         F +  IAL+ YT+AF+ E++RSG+  VP GQ EAA ++G
Sbjct: 70  AYPKLELLQFPF---------FTAAVIALTVYTSAFVCEVLRSGINTVPVGQAEAARSIG 120

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   ++   V+LPQA R+++PP+ S  + LLKN+++A      ++ SV   +  +    I
Sbjct: 121 LGFAQSLTNVILPQAFRAVVPPMVSVLIALLKNTTVAAGFSVNEVGSVIPFLNEEGEPTI 180

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +     +L L I + L       + ++  
Sbjct: 181 NAFVWIAVGFLILVIPLTLIQRGFEKRWSVAR 212



 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L     + + ++GTL+   R+S    +  +   YV + RN P  +V
Sbjct: 4   YGDVLARGFLRTIELFLLAGVGSLVLGTLLATLRVSPVPALRAVGTGYVTLLRNTPLTLV 63

Query: 145 IFFLYKSVLSV 155
            FF   +   +
Sbjct: 64  FFFFVFAYPKL 74


>gi|327193780|gb|EGE60657.1| amino acid ABC transporter permease [Rhizobium etli CNPAF512]
          Length = 241

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 81/178 (45%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L + T +I  +P L+LI   Y    D                  F++    L     A+
Sbjct: 62  MLDLYTTVIRAVPELILIVGLYYAGTDGLNRLLAALDLPPIDVNGFVAAVAVLGFVQGAY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E++R  ++A+P GQ+EAA A G+      R VLLP  + + +P L + ++++ K+S+L
Sbjct: 122 MTEVLRGAILAIPAGQIEAAKAFGMGPVLRFRRVLLPALLPNALPGLANLWMSVTKDSAL 181

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              VG+ +L          T       L   F+YL+++++  +    +  ++   + +
Sbjct: 182 VAVVGYQELALATRLAGASTKHYFVFFLASAFLYLAITLVSNVAFRLVEGRVRRGQPR 239


>gi|237816315|ref|ZP_04595308.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260546067|ref|ZP_05821807.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260562864|ref|ZP_05833350.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
 gi|237788382|gb|EEP62597.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Brucella abortus str. 2308
           A]
 gi|260096174|gb|EEW80050.1| polar amino acid ABC transporter [Brucella abortus NCTC 8038]
 gi|260152880|gb|EEW87972.1| polar amino acid ABC transporter [Brucella melitensis bv. 1 str.
           16M]
          Length = 166

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 11/176 (6%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           ++ +    I G P LV I L Y   +  P L                +  +A++  ++ F
Sbjct: 1   MIGVVISFIRGTPILVQIFLFY---YGLPAL--------GLDLSPIQAGILAIAFNSSIF 49

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           I EI+R GL  +  G +EAAIALG+  +     V+LPQ    I+PPL ++    +K ++L
Sbjct: 50  ITEIMRGGLSGMDSGPVEAAIALGIKGKVIWTKVILPQLYIRIMPPLVNELTTTVKGTAL 109

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +   +++     + N + + +E +L    I  +++++++     L  + A + 
Sbjct: 110 LSVITVVEVLRTAQQVANASFRPLETLLCAAIILFAVNLVLSQCGRVLEMRFAARR 165


>gi|157370639|ref|YP_001478628.1| polar amino acid ABC transporter inner membrane subunit [Serratia
           proteamaculans 568]
 gi|157322403|gb|ABV41500.1| polar amino acid ABC transporter, inner membrane subunit [Serratia
           proteamaculans 568]
          Length = 240

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 85/215 (39%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S V G++L+     + + +  +    L       F    L   L+LI     
Sbjct: 26  MTAKLFLLSVVPGLLLA-ALMAIGQVYGPRPLSWLIRSVTYFFRSTPLYLQLMLIYYGLS 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++A+++   +   PR +  A  A 
Sbjct: 85  QFDVVQLGWQNDQPFWLLFRDATFCATLALVLNTSAYVAQLLAGMMETFPRQEWIAGEAY 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V       T   
Sbjct: 145 GMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARAFYAATYSP 204

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               L+   +YL  + ++    +R   +     ++
Sbjct: 205 FIPFLMAAALYLLCTFLLIFMFSRAERRWLAFIRR 239


>gi|325063357|gb|ADY67047.1| amino acid ABC transporter, permease protein [Agrobacterium sp.
           H13-3]
          Length = 216

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 13/185 (7%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +    LYIS +   G P LV + + + +    P+L       G  ++P   +  +AL
Sbjct: 45  RLPRLASGLYISFW--RGTPILVQLLIVFYV---LPLL-------GLDLTP-VAAATLAL 91

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  TAAF +EI R+GL ++P+G+ EAA  LGL+  +    + +PQA R+++P L  +   
Sbjct: 92  ALNTAAFQSEIYRAGLQSIPKGEREAAAMLGLSAGRTFLHIEVPQAFRTMLPALVGEIQA 151

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           L+KNSSL   +   DL          T + ++  L  + +Y+++  ++A     +   + 
Sbjct: 152 LVKNSSLVSVIAVTDLTRRAQQYAATTFRPLDAYLSALLLYVAVGALLAGIGLLVERHLT 211

Query: 394 LKEKK 398
               +
Sbjct: 212 KGATR 216


>gi|261820367|ref|YP_003258473.1| polar amino acid ABC transporter inner membrane protein
           [Pectobacterium wasabiae WPP163]
 gi|261604380|gb|ACX86866.1| polar amino acid ABC transporter, inner membrane subunit
           [Pectobacterium wasabiae WPP163]
          Length = 237

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 11/220 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L         N  I V S  +G++        +          LP   ++ F      
Sbjct: 19  PWLPLILKGFGLNLLISVLSMAIGMLAGTLLG--AAQMANLAIIRLPARILTLFFRNSPW 76

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +++  + + L F      +    G     P+++   +AL+   + + +EIVR GL ++P
Sbjct: 77  LVIMFYVMFLLPF------EIKIAGTWFSFPDWVKAVVALAIPVSGYTSEIVRGGLKSIP 130

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             Q EAA AL     + T  ++LPQA+R ++PP  + Y +++  +SLA  VG  +++++ 
Sbjct: 131 TTQWEAAAALAFGTVRTTLTIILPQAIRQMVPPTMNLYCSVVMATSLANVVGVQEVMTIT 190

Query: 354 GTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNA 390
            TI+    +    +    I + ++ +    I+LF  RL  
Sbjct: 191 QTILTTETRPGLILPAYSITLILFFAFVFPISLFSRRLER 230



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 38/86 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   IL GF     ++   M    + GTL+GA +++   ++    R+    FRN P LV
Sbjct: 19  PWLPLILKGFGLNLLISVLSMAIGMLAGTLLGAAQMANLAIIRLPARILTLFFRNSPWLV 78

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGM 169
           ++F++   +   + I       P  +
Sbjct: 79  IMFYVMFLLPFEIKIAGTWFSFPDWV 104


>gi|254485495|ref|ZP_05098700.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. GAI101]
 gi|214042364|gb|EEB83002.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. GAI101]
          Length = 268

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 77/213 (36%), Gaps = 10/213 (4%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
                 F F   I    FAT L     + +           F+  G P  +     Y L 
Sbjct: 40  MIWNIYFGFFALISGFFFATALGFAKAQPSPWLRKPAEWFIFIFRGSPLFIQFFFGYFLF 99

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
                +  F        +  ++   + L   T+A+ AEI    L ++P+G  EAA A G+
Sbjct: 100 LSLKSVHPFF----DAFTSAWLGALVVLFFNTSAYSAEIFYGALQSIPKGDTEAADAYGM 155

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQ 359
           +     + V+ P  +R   P  T++ + L   ++L    GF       D +       ++
Sbjct: 156 SGWPRFKRVIWPTMLRLAWPAYTNEAIFLFHATTLVFFTGFPALQQRGDALYYASYFADK 215

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           T        I    ++ L+++I      +N ++
Sbjct: 216 TFNPFIPYPILAGYFVLLTLVIIGIFGAINRRL 248


>gi|167587516|ref|ZP_02379904.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ubonensis Bu]
          Length = 244

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 83/215 (38%), Gaps = 2/215 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +   SF  G++L + A  L +        +L  LY            +L+A     
Sbjct: 28  LTLGVAAASFCTGVLLGI-AGALGKLSRYAPLASLARLYTMLVRALPELLCLLLAFYTVA 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
              +  L     +        F+   ++L     A++ +I R+ L+ VP GQ+EAA A G
Sbjct: 87  PAVEHALRDSGIVSDGFAFDPFVVAALSLGFIQGAYLTDIFRAALVNVPAGQVEAAHAYG 146

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG-FADLVSVGGTIINQTGQA 363
           LT  +    + LP A R  +P + + +LN  K++S    +G F DL+         T   
Sbjct: 147 LTPWQTLIRIRLPAAARLALPGVGNVWLNATKDASFISVLGSFTDLLKASQLAAGATRHY 206

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +   L+   ++L LSI        L         +
Sbjct: 207 VFFYLVTAALFLLLSIASTGIFAALERHANRGATR 241


>gi|307255601|ref|ZP_07537406.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307260052|ref|ZP_07541764.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306861450|gb|EFM93439.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306865888|gb|EFM97764.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 222

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 87/213 (40%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A+I   S  L ++       L R  +    +A+   Y+ T  I       ++   + 
Sbjct: 20  WLTARISFISVGLSLIFGTLFGLLMRA-NNVFVRAVCRFYLETIRIVP-----ILVWLFA 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F        +  G       F       + +  A + ++VR  L ++ + Q+E+A AL
Sbjct: 74  IYFGLSTWFNLHISG-------FWVCIWVFTLWGVAEMGDLVRGALASIEKHQIESARAL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL   +  + + LPQ  R ++P   + +  ++K SSLA  +G  ++V VG  II      
Sbjct: 127 GLNRWQIFQHIELPQGTRRVLPGAINLFTRMVKTSSLAALIGVIEMVKVGQQIIENALLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y  +   ++L   RL  K
Sbjct: 187 NPSASFFVYGLIFILYFLICYPLSLLATRLEHK 219



 Score = 40.7 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  + I GTL G    + N  V  +CR Y+E  R +P LV +F +
Sbjct: 15  LAQGLWLTARISFISVGLSLIFGTLFGLLMRANNVFVRAVCRFYLETIRIVPILVWLFAI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  + +   +      +   +F          L     A I
Sbjct: 75  YFGLSTWFNLHISGFWVCIWVFTLWGVAEMGDLVRGALASI 115


>gi|260891039|ref|ZP_05902302.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
 gi|260859066|gb|EEX73566.1| amino acid ABC transporter, permease protein [Leptotrichia
           hofstadii F0254]
          Length = 225

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 22/213 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               VFS + G++L +  T  ++  +           I  F +  +  + L+   + ++F
Sbjct: 30  LVSIVFSILFGLILGIVMTSKNKIIYG----------ILKFYLESMRIIPLLVWLFIIYF 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                      G         +  I    +  A + +IVR  +I++P+ Q E+A ALGL 
Sbjct: 80  GV-------AKGFDLHIDSETTTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALGLD 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ---- 362
             +  R VLLPQA+R I P   +    ++K +SLA+ +  A+++ +G  II  + +    
Sbjct: 133 TSQVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKNPM 192

Query: 363 -AIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               + L   F+Y  +   I L   ++  K A+
Sbjct: 193 APFWVYLFIFFLYFIICYPITLLSKKMEKKWAI 225



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  +A   ++ + + G ++G    S NK++  I + Y+E  R IP LV +F +
Sbjct: 18  LMGGLIVTGQIALVSIVFSILFGLILGIVMTSKNKIIYGILKFYLESMRIIPLLVWLFII 77

Query: 149 YKSV 152
           Y  V
Sbjct: 78  YFGV 81


>gi|24379378|ref|NP_721333.1| putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
 gi|24377307|gb|AAN58639.1|AE014934_3 putative amino acid ABC transporter, permease protein
           [Streptococcus mutans UA159]
          Length = 230

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 5/170 (2%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F++   P +VL+ L +   +  P    +            + + + +    AA I+E+
Sbjct: 59  YVFILRCTPPIVLLFLVF---YGLPEFLTWWLHLDVDDWSRAIFVVVTMVLLFAASISEV 115

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            +S  +AVP+GQ+EA +++GLT  +  R +LLPQ  +  +P +T+  LNL+K+++LA  +
Sbjct: 116 FKSAYLAVPKGQLEAGLSIGLTGFQTFRRILLPQTFQIALPNITTAILNLMKDAALAYTI 175

Query: 345 GFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  D++  G  II++     ++E      FIY  ++++++L  + +   +
Sbjct: 176 GLVDVMGAGNLIISRNLGNYSLETYTAVAFIYWGIALVLSLVSHFMEHSL 225


>gi|311898731|dbj|BAJ31139.1| putative glutamate ABC transporter permease protein [Kitasatospora
           setae KM-6054]
          Length = 216

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 13/188 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       +     +++ F    L  L      + + F  P L              F +
Sbjct: 42  RVSPVPVLRGFGTAWVTVFRNTPLTLL-----FFVVTFMLPRLEL--------HISSFTA 88

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              ALS YT +FI E++R+G+  VP GQ EAA +LG+   +   LV+LPQA R++I PL 
Sbjct: 89  AVAALSVYTGSFICEVLRAGINTVPLGQAEAARSLGMGFGQTLFLVVLPQAGRAVIAPLG 148

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           S ++ L +NS++A A    +L SV  T    +             YL++   I+  ++ L
Sbjct: 149 SVFIALPRNSAVAGAFNVFELFSVQKTWTEDSAPIFVSFFWLALAYLAIGFAISSVLSLL 208

Query: 389 NAKIALKE 396
             ++A+  
Sbjct: 209 ERRVAVAR 216


>gi|254503194|ref|ZP_05115345.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222439265|gb|EEE45944.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 220

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/128 (28%), Positives = 61/128 (47%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F  +   LS   A ++AE  R G  AVP  Q+ AA +LG++  +    +++PQ  R + 
Sbjct: 90  PFTIVLAGLSFNCAGYLAENFRGGFQAVPDTQLRAARSLGMSAWQTYTRIIIPQVFRIVY 149

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            PLT+Q +  +  SSL + VGF +L        ++T +  E   +   IY  +  +I   
Sbjct: 150 HPLTNQLVWAVLMSSLGMLVGFRELSGETQFFASRTFRIFEYFAVTAIIYYVIVKVILGA 209

Query: 385 MNRLNAKI 392
              L  ++
Sbjct: 210 SRLLAWRL 217


>gi|121602538|ref|YP_988957.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Bartonella bacilliformis KC583]
 gi|121602648|ref|YP_988988.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Bartonella bacilliformis KC583]
 gi|120614715|gb|ABM45316.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Bartonella bacilliformis KC583]
 gi|120614825|gb|ABM45426.1| glutamate/aspartate ABC transporter, permease protein GltK
           [Bartonella bacilliformis KC583]
          Length = 238

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 102/255 (40%), Gaps = 17/255 (6%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           ++                             +  LS    ++       +F  + G++L+
Sbjct: 1   MIDFMSSNFWSYFPFEFSSFDFSFFTFEIFRSYILSGLLFSVFLTFVATIFGLIFGVLLA 60

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
           +           +     P  + +   I  + ++ L+ +        P L   +    + 
Sbjct: 61  MM----------RLSSIKPFSWFAAIYITAMRSIPLVMVILWFFVLLPFLIGTSIGANN- 109

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
                 S  I  + + AA+ AEI+R+G+ ++ +GQ +A  ALG+T+ +   +V+LPQA R
Sbjct: 110 ------SAIITFTAFEAAYFAEIMRAGIHSISQGQKQAGHALGMTYWQNMYIVILPQAFR 163

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
           +++P   +Q + L ++++L  A+    L++    + N  G   E  ++    Y  +   +
Sbjct: 164 NMLPVFLTQVIILFQDTTLVYAISGNSLLNGFDLVSNNFGVKPEAYILAAVFYFGICFTL 223

Query: 382 ALFMNRLNAKIALKE 396
           +  +  L  KI++  
Sbjct: 224 SQIVLYLQKKISIIR 238



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 33/62 (53%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL G + + +L F   I   I G L+   RLS+ K  +W   +Y+   R+IP ++VI +
Sbjct: 33  YILSGLLFSVFLTFVATIFGLIFGVLLAMMRLSSIKPFSWFAAIYITAMRSIPLVMVILW 92

Query: 148 LY 149
            +
Sbjct: 93  FF 94


>gi|149203651|ref|ZP_01880620.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. TM1035]
 gi|149142768|gb|EDM30810.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. TM1035]
          Length = 221

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 88/232 (37%), Gaps = 15/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F        L           +I + S  LGI L++  T   R    +   A   
Sbjct: 1   MFNYTFQWKQALNRLPQMLDGALVTMEIAILSMALGIALAILLTVF-RLSGSRPLMAFAT 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++             +   Y  HF                   F+S+ I ++   A ++
Sbjct: 60  TWVEIARNTPA-----LFQIYMAHFGVASF--------GIHFSPFVSILIGITFNNAGYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  L A+P  Q  A  +LGLT  ++ R ++LPQ +R    P+T+Q +  +  +SL 
Sbjct: 107 TENFRGALKAIPDTQGRAGRSLGLTQLQSFRYIILPQMLRISFLPMTNQMVWAILMTSLG 166

Query: 342 VAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V VG  +DL  V   +   T +  E+  +   I+  ++  I +    + A++
Sbjct: 167 VTVGMNSDLYGVTQDLNALTFRTFELFALAAVIFYLITKTITIGGRLIAARL 218



 Score = 42.2 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 38/100 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   M     +  L+   RLS ++ +      +VE+ RN P L  I+  
Sbjct: 18  MLDGALVTMEIAILSMALGIALAILLTVFRLSGSRPLMAFATTWVEIARNTPALFQIYMA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  V S        + +  G+  NN G           A 
Sbjct: 78  HFGVASFGIHFSPFVSILIGITFNNAGYLTENFRGALKAI 117


>gi|332098821|gb|EGJ03778.1| general L-amino acid transport system permease protein aapQ
           [Shigella boydii 3594-74]
          Length = 155

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 60/150 (40%), Positives = 85/150 (56%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++ +  KTG+     
Sbjct: 1   MSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTW 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +  LI GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIA
Sbjct: 61  PFAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIA 120

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           EI+R+G+ AVP GQ EAA +LGL + ++  
Sbjct: 121 EIIRAGIQAVPYGQHEAARSLGLRYARSLF 150


>gi|330429803|gb|AEC21137.1| hypothetical protein PT7_2597 [Pusillimonas sp. T7-7]
          Length = 237

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 79/219 (36%), Gaps = 1/219 (0%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
                         I V    LGIV+ +    + +    +    L  +Y +         
Sbjct: 13  WGWTLLRGAVMTLLISVLGMALGIVIGILGASI-KTSGPRLLGLLVGIYTTIVRSIPELL 71

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           ++ +     +     +    ++    T     +   +A+     ++  E+ R  L A+P 
Sbjct: 72  IIYLLFFGSVQAASDLADALSWQDAMTSWFPALVGILAIGLIAGSYAVEVFRGALKAIPT 131

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQ+EAA A+G++ R+    +++PQ     +P   + +   LK+++L   VG  +++    
Sbjct: 132 GQIEAARAIGMSARQRLFRIVMPQMFWYALPGANNVWQTALKDTALISLVGLVEIMRAAV 191

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                T + + + L+   +Y  +             +  
Sbjct: 192 LGAAATREPLALYLMAGALYFMIGATSQGVFVLAERRYG 230



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 69/206 (33%), Gaps = 26/206 (12%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           +   +L G V T  ++  GM    +IG L  + + S  +L+  +  +Y  + R+IP L++
Sbjct: 13  WGWTLLRGAVMTLLISVLGMALGIVIGILGASIKTSGPRLLGLLVGIYTTIVRSIPELLI 72

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
           I+ L+   +        ++     M                       + V  + + L A
Sbjct: 73  IYLLFFGSVQAASDLADALSWQDAMTSWFP------------------ALVGILAIGLIA 114

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
              +        KA+P   I      G+     +            L   N +  + +  
Sbjct: 115 GSYAVEVFRGALKAIPTGQIEAARAIGMSARQRLFRIVMPQMFWYALPGANNVWQTALKD 174

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLI 290
             +   + L         EI+R+ ++
Sbjct: 175 TALISLVGLV--------EIMRAAVL 192


>gi|323339555|ref|ZP_08079830.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ruminis ATCC 25644]
 gi|323093035|gb|EFZ35632.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ruminis ATCC 25644]
          Length = 227

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 18/230 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +    +        + T+  I   S   G++L  F   L R       + +  LY+  F 
Sbjct: 8   VLFQGKNFLRLMGGLWTSVWIAGVSLGFGLLLGTFLGVL-RTLKNAVLRIVLRLYLEFFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I  +PT+VL+ L Y +     +  QF+    +          +A S + +A  ++IVR  
Sbjct: 67  I--VPTIVLLFLVYYI-----LPRQFHVEVSAEWM-----AVLAFSLWVSAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP+ Q EA +ALGLT  +    VL+PQA    +P   +    ++K +SL + +   D
Sbjct: 115 LESVPKHQREAGLALGLTKGQLFVHVLMPQAFMLELPAAINLATRVVKTTSLLMIISVMD 174

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +++VG  II    Q        I      +Y  +   ++L    L  K +
Sbjct: 175 VINVGQQIIEANNQQYPSGVFWIYGFIFMLYFIVDYPLSLISKMLQQKFS 224



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 40/85 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +    ++GT +G  R   N ++  + R+Y+E FR +P +V++F +
Sbjct: 18  LMGGLWTSVWIAGVSLGFGLLLGTFLGVLRTLKNAVLRIVLRLYLEFFRIVPTIVLLFLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     +   +  +    F   
Sbjct: 78  YYILPRQFHVEVSAEWMAVLAFSLW 102


>gi|309779094|ref|ZP_07673861.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Ralstonia sp. 5_7_47FAA]
 gi|308922159|gb|EFP67789.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Ralstonia sp. 5_7_47FAA]
          Length = 233

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 11/226 (4%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR------LSRHFHEKTGKALPLLYISTFL 228
            L    +T+  +A       V+G++L+           L         +  PLL    F 
Sbjct: 1   MLEGFGMTLLVSAAAIAGGLVIGLLLTALRASAQPWLHLPARALVAFLRKTPLLVQLFFW 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
            FG   L+   +   +     +      +   +   EF++    ++ Y  AF +E +R+G
Sbjct: 61  YFGAAQLLGEDVVGAITGWGGIAVGAWRLPAPSF--EFLAATFGIALYAGAFFSEELRAG 118

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVPR   EAA++LG T R A   V+LPQA+R    PL  Q  N +KN+SLA+ +G A+
Sbjct: 119 IRAVPR---EAALSLGFTPRAAFLRVVLPQALRVSALPLLGQCANTIKNTSLAMGIGLAE 175

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L      +   T  A +   +   +Y  + +++     R+  ++  
Sbjct: 176 LAYSARQVETDTLLAFQAFAVATVLYAGVILLLQWVAPRVLRRLGW 221



 Score = 40.7 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 1/148 (0%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T  ++ + +    +IG L+ A R SA   +    R  V   R  P LV +FF 
Sbjct: 1   MLEGFGMTLLVSAAAIAGGLVIGLLLTALRASAQPWLHLPARALVAFLRKTPLLVQLFFW 60

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y     +L   D    +     +       P  + +  A  F  +   G   S       
Sbjct: 61  YFGAAQLLGE-DVVGAITGWGGIAVGAWRLPAPSFEFLAATFGIALYAGAFFSEELRAGI 119

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLV 236
           R    +   +L     + FL   LP  +
Sbjct: 120 RAVPREAALSLGFTPRAAFLRVVLPQAL 147


>gi|262047371|ref|ZP_06020328.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
 gi|260572345|gb|EEX28908.1| amino acid ABC transporter permease [Lactobacillus crispatus
           MV-3A-US]
          Length = 223

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S ++G+ +      L R    +  + +  LY+  F 
Sbjct: 8   VLFEGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGIL-RTLKNRPIRFVLRLYLEFFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I     L+     Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  IVPTVVLL-----YLVYYILPRSLHVNW-------PATWMAVLAFSMWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP+ Q E+ +ALGL   +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 115 LESVPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIKTTSLLMIINIME 174

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++V   II    Q        +      +Y  L   ++ +  RL AK
Sbjct: 175 VINVVQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 222



 Score = 44.2 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 42/85 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +I    +GT+ G  R   N+ + ++ R+Y+E FR +P +V+++ +
Sbjct: 18  LMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPTVVLLYLV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +   L +   +  +    F   
Sbjct: 78  YYILPRSLHVNWPATWMAVLAFSMW 102


>gi|150018982|ref|YP_001311236.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
 gi|149905447|gb|ABR36280.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 210

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 22/223 (9%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                N   + F    M     I + S VL +   +    +SR+F +     +  +YI T
Sbjct: 1   MSSVFNQANMMFLLQGMKLTLIIAIISIVLSMFFGIIL-AISRNFSKGIMGRIATIYIET 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F                   + P L     I          S  ++ + +T+A +AEI R
Sbjct: 60  FR------------------NTPNLLWILSIRFLVPIKPMYSGILSFTLFTSAVMAEIFR 101

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
            G+ +V RGQ EAA + G T  +  R ++LPQ+ R  IP + SQ + ++K++S   AVG 
Sbjct: 102 GGMNSVSRGQYEAAYSQGFTKFQTLRYIILPQSFRRCIPTVLSQSITVIKDTSFLWAVGI 161

Query: 347 ADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMN 386
            +    G  ++     + Q   +       Y  ++  I+  + 
Sbjct: 162 EEFTGKGMILMGSFVSSSQIFLLFGAIAATYFIINFTISCCVR 204



 Score = 48.0 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +A   ++ +   G ++   R  +  ++  I  +Y+E FRN P L+ I  +
Sbjct: 13  LLQGMKLTLIIAIISIVLSMFFGIILAISRNFSKGIMGRIATIYIETFRNTPNLLWILSI 72

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG 175
                 V   P +S +L F +F +   
Sbjct: 73  R---FLVPIKPMYSGILSFTLFTSAVM 96


>gi|33595040|ref|NP_882683.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis 12822]
 gi|33565117|emb|CAE35912.1| glutamate/aspartate transport system permease protein [Bordetella
           parapertussis]
          Length = 227

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 6/228 (2%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F        L +  LT    + +   S   G V+      ++R +  +    L  +Y++ 
Sbjct: 4   FDYQAIIDALPYLFLTGLRFSLLLTLSSAAGGVVLGALLAIARLYGRRWVAWLAAIYVNL 63

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIV 285
           F      +L L+ + + ++F  P L Q+       +      S ++    + AA+ +EI+
Sbjct: 64  FR-----SLPLVLVIFLIYFILPYLLQWITQAERPIVLGATGSAFVTFILFEAAYFSEII 118

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G+ +V  GQ  A  ALGLTH +  R V+LPQA+R+++P L +Q + + + ++L   + 
Sbjct: 119 RAGIGSVGPGQYAAGSALGLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQETALVYVLS 178

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             D +     I  +  + +E+ ++   ++  LS   +  +  L A++ 
Sbjct: 179 LPDFLGAATKIAQRDNRLVEMYVLVAVVFFVLSFTASRGVRALRARLG 226



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 10/161 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   +  L  S      ++G L+   RL   + VAW+  +YV +FR++P ++VIF +
Sbjct: 17  FLTGLRFSLLLTLSSAAGGVVLGALLAIARLYGRRWVAWLAAIYVNLFRSLPLVLVIFLI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF--------VLGIVL 200
           Y  +  +L     +          +  ++F        ++I               G  L
Sbjct: 77  YFILPYLLQWITQAERPIVLGATGSAFVTFILFEAAYFSEIIRAGIGSVGPGQYAAGSAL 136

Query: 201 SLFATRLSR--HFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            L   ++ R     +     LP+L     +IF    LV + 
Sbjct: 137 GLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQETALVYVL 177


>gi|83942923|ref|ZP_00955383.1| His/Glu/Gln/Arg/opine family protein ABC transporter, permease
           protein [Sulfitobacter sp. EE-36]
 gi|83845931|gb|EAP83808.1| His/Glu/Gln/Arg/opine family protein ABC transporter, permease
           protein [Sulfitobacter sp. EE-36]
          Length = 268

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 13/210 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            F+ V G +L+     +++       +     +I  FL  G P  +     Y L      
Sbjct: 48  FFALVSGFLLATAL-AVAKAHPSPWLRKPAEWFI--FLFRGSPLFIQFFFGYFLFLSLKS 104

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F        +  ++   I L   T+A+ AEI    L ++P+G  EAA A G++    
Sbjct: 105 VHPFF----DMFTSAWLGALIVLFFNTSAYSAEIFYGALQSIPKGDTEAADAYGISGWPR 160

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAI 364
            + ++ P  +R   P  T++ + L   ++L    GF       D +       ++T    
Sbjct: 161 FKRIIWPTMLRLAWPAYTNEAIFLFHATTLVFFTGFPALQQRGDALYYASYFADKTFNPF 220

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               I    ++ L+++I      +N ++  
Sbjct: 221 IPYPILAGYFILLTLVIIAIFGLINRRLNR 250


>gi|330876912|gb|EGH11061.1| histidine/lysine/arginine/ornithine ABC transporter permease HisM
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 144

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 59/132 (44%)

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
           +          +A +  T A+  EI    + ++  G++EAA A GLT  K    V++P  
Sbjct: 4   AFFRDAMNCTILAFTLNTCAYTTEIFAGAIRSMAHGEVEAAKAYGLTGWKLYAYVIMPSV 63

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +R  +P  +++ + +L ++++A      D++ V     + T    +   I   +YL+++ 
Sbjct: 64  LRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFMTFQSFGIAAVMYLTVTF 123

Query: 380 MIALFMNRLNAK 391
           ++         +
Sbjct: 124 ILVGLFRLAERR 135


>gi|290580620|ref|YP_003485012.1| putative amino acid ABC transporter permease [Streptococcus mutans
           NN2025]
 gi|254997519|dbj|BAH88120.1| putative amino acid ABC transporter permease protein [Streptococcus
           mutans NN2025]
          Length = 230

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 89/170 (52%), Gaps = 5/170 (2%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F++   P +VL+ L +   +  P    +            + + + +    AA I+E+
Sbjct: 59  YVFILRCTPPIVLLFLVF---YGLPEFLTWWLHLDVDDWSRAIFVVVTMVLLFAASISEV 115

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            +S  +AVP+GQ+EA +++GLT  +  R +LLPQ  +  +P +T+  LNL+K+++LA  +
Sbjct: 116 FKSAYLAVPKGQLEAGLSIGLTGFQTFRRILLPQTFQIALPNITTAILNLMKDAALAYTI 175

Query: 345 GFADLVSVGGTIINQT--GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  D++  G  II++     ++E       IY  ++++++L  + +   +
Sbjct: 176 GLVDVMGAGNLIISRNLGNYSLETYTAVALIYWGIALVLSLVSHFMEHSL 225


>gi|284007897|emb|CBA73835.1| arginine ABC transporter, permease protein [Arsenophonus nasoniae]
          Length = 189

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 3/181 (1%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
               KT     ++     L  G P LV   L Y      P L  +  +     +P ++  
Sbjct: 4   ILSLKTAIFSSIIKGYITLFTGTPLLVQFFLIYYGPGQFPALRDYPALWALISTP-WICA 62

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            +AL+  +AA+   +    + A+P+   +A  ALG+++ +    ++LP A++  +   ++
Sbjct: 63  LLALALNSAAYSTLLFHGAVKAIPKTSWQACQALGMSNHQTL-RIILPYALKRALSSYSN 121

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           + + + K++SLA  +   +++     I  QT   +++ +    IYL ++ ++ L M  L 
Sbjct: 122 EVILIFKSTSLASTITLLEIMGYSQQIFGQTYN-VDVFIAAGIIYLCVNGILTLLMRYLE 180

Query: 390 A 390
            
Sbjct: 181 K 181


>gi|310644454|ref|YP_003949213.1| amino acid abc transporter, permease protein [Paenibacillus
           polymyxa SC2]
 gi|309249405|gb|ADO58972.1| Amino acid ABC transporter, permease protein [Paenibacillus
           polymyxa SC2]
          Length = 225

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I + S ++G +L +    L      +T ++ P+ ++  F +     + ++   Y +
Sbjct: 24  VTLEIALLSIIIGTLLGILMGLL------RTLQSKPIRFVLRFYLETFRIIPILVWLYVV 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F    L   +  G        ++  I  S + AA I +IVR  L ++P+ Q+E+  ALG
Sbjct: 78  YFGFTPLLNVDISGE-------LTAVIVFSLWGAAEIGDIVRGALESLPKHQVESGQALG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-----Q 359
           LT+ +  R VL+PQA+R ++P   +    ++K +SL V +G  ++V VG  II       
Sbjct: 131 LTYWQLYRHVLIPQAVRRMLPGSINLATRMIKTTSLVVLIGVVEVVKVGQQIIELGVIKA 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +  +      +Y  +   ++    R   +
Sbjct: 191 PSASFWVYGFIFILYFLVCYPLSRLSKRFERR 222



 Score = 48.8 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   +I  T++G L+G  R   +K + ++ R Y+E FR IP LV ++ +
Sbjct: 18  LLGGLLVTLEIALLSIIIGTLLGILMGLLRTLQSKPIRFVLRFYLETFRIIPILVWLYVV 77

Query: 149 YKSVL 153
           Y    
Sbjct: 78  YFGFT 82


>gi|229542365|ref|ZP_04431425.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
 gi|229326785|gb|EEN92460.1| polar amino acid ABC transporter, inner membrane subunit [Bacillus
           coagulans 36D1]
          Length = 229

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 18/229 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +F            +  +AKI   S   G +L +    L R  H    + L  LY+  F
Sbjct: 7   SIFFEGANFLRLLGGLYVSAKIAFLSIFFGGILGIVLGVL-RTLHNPLLRLLLRLYLEFF 65

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            I     L+ +      ++  P     N+   +          I  S + AA +++IVR 
Sbjct: 66  RIVPTIVLLFLF-----YYILPQSFNINYKADTV-------GTIVFSLWMAAEMSDIVRG 113

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            LI+VP  Q+E+  A+GL+  +  R VL+PQ++  +IP   +    ++K +SL + +   
Sbjct: 114 ALISVPMHQVESGKAIGLSTVQLYRYVLVPQSVHLMIPATINLMTRIIKTTSLLLLISVV 173

Query: 348 DLVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           D+++VG  II          A  +      +Y  L   ++    RL  +
Sbjct: 174 DVINVGQQIIEANSHRYQDGAFWVYGFIFILYFILCYPLSRLARRLERR 222



 Score = 37.2 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 79/199 (39%), Gaps = 5/199 (2%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  +AF  +    I+G ++G  R   N L+  + R+Y+E FR +P +V++F  
Sbjct: 18  LLGGLYVSAKIAFLSIFFGGILGIVLGVLRTLHNPLLRLLLRLYLEFFRIVPTIVLLFLF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  +     I   +  +   +F          +       + +     G  + L   +L 
Sbjct: 78  YYILPQSFNINYKADTVGTIVFSLWMAAEMSDIVRGALISVPMHQVESGKAIGLSTVQLY 137

Query: 209 RHFHEKTGKAL---PLLYISTFLIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGSTVS 263
           R+        L     + + T +I     L+LI++   ++  + ++      +  G+   
Sbjct: 138 RYVLVPQSVHLMIPATINLMTRIIKTTSLLLLISVVDVINVGQQIIEANSHRYQDGAFWV 197

Query: 264 PEFMSLYIALSCYTAAFIA 282
             F+ +   + CY  + +A
Sbjct: 198 YGFIFILYFILCYPLSRLA 216


>gi|331697742|ref|YP_004333981.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
 gi|326952431|gb|AEA26128.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudonocardia dioxanivorans CB1190]
          Length = 215

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 17/210 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V S VLG +++       R       +   +LY++      L  ++     +  
Sbjct: 21  LFLVAAVGSLVLGAIVAAM-----RVSPVPILRTFGMLYVNLIRNTPLTLVL-----FFF 70

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L   +          F    I L  YTAAF+ E++RSG+  VP GQ EA+ ALG
Sbjct: 71  AFAYPRLEIVDL-------SFFTRACIGLILYTAAFVCEVLRSGINTVPVGQAEASRALG 123

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
               +    +++PQA+R+++PPLT+  + LLKN+++A          +   +       +
Sbjct: 124 FGFNQTLTTIVMPQAVRAVVPPLTNVQIALLKNTTIASGFSVFQAGGIYQELSENGYNVL 183

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             +L     +L L + + L    L+ + ++
Sbjct: 184 VGLLWIALGFLILVVPLTLLQRNLDRRWSV 213



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 80  TSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNI 139
            +   Y  A L     T  L     + + ++G +V A R+S   ++     +YV + RN 
Sbjct: 6   DNLDLYGRAFL----GTIELFLVAAVGSLVLGAIVAAMRVSPVPILRTFGMLYVNLIRNT 61

Query: 140 PPLVVIFFLYKSVLSVLP 157
           P  +V+FF   +   +  
Sbjct: 62  PLTLVLFFFAFAYPRLEI 79


>gi|193084291|gb|ACF09950.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote KM3-130-D10]
          Length = 709

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 95/147 (64%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D P         G  ++P F+++ + L+ +TA+ +AEIVR  + A+P+GQ+EAAI+L L
Sbjct: 558 IDSPGSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPKGQVEAAISLAL 617

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RLV+LPQA+RS++P + +Q++N+ KNSSLAV V ++D+  V   ++N  G+ I 
Sbjct: 618 NPFQRLRLVILPQALRSMVPLMNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLIP 677

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++ +  Y + S+ I+L MN  N ++
Sbjct: 678 LFILLLITYQAGSLAISLVMNWYNTRV 704



 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 3/166 (1%)

Query: 33  LALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL-V 91
             + L +  L+  ++    M+     +   F+ +   F+I+   +   ++S      L  
Sbjct: 252 FIMYLLLRVLYLQHDPDPVMQNR-WMVKFDFMGKVNTFKINPWPMLVEANSDARWLFLKA 310

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
             +N+  +    ++   I+GT+VG  RLS+NKL + +  VYVE+FRN+P  V++F +   
Sbjct: 311 AIINSARVTLLSIVLCVILGTIVGVTRLSSNKLASTMATVYVEIFRNLPLAVLLFLIATQ 370

Query: 152 VLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                P+      L  G +F +N+G+ F T+       + + +  L
Sbjct: 371 YGIQAPLFIDETFLFGGAVFYSNQGIWFVTVASYQRLVMGLVALAL 416


>gi|34496729|ref|NP_900944.1| ABC transporter permease [Chromobacterium violaceum ATCC 12472]
 gi|34102584|gb|AAQ58949.1| probable permease of ABC transporter [Chromobacterium violaceum
           ATCC 12472]
          Length = 246

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 7/236 (2%)

Query: 158 IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHF 211
            P                     LT   +  +   + +LGI L+          RL+   
Sbjct: 3   PPAWLGHNWLEPHYLIWLGKGALLTGWLSLLVIAAASLLGIALTALLDGGPRPLRLATRL 62

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                +  PL+       FG+  L+    K  L+  + ++  F+ +     S EF++ + 
Sbjct: 63  FVGLHRNTPLMVQLLLWYFGVSGLLPDEAKIWLNTPRALMLPFD-LALPWPSFEFLAAFT 121

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
           AL+ Y+AAFI+  +++GL AVP+GQ  AA ALG++  +  RLV+LPQA + +  PL  QY
Sbjct: 122 ALTLYSAAFISGELQAGLNAVPKGQRLAARALGMSGWQVLRLVVLPQAWQLVKRPLVGQY 181

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
             ++KN+SL +A+G A+L      +  +T  A +       +YL+L ++  L   R
Sbjct: 182 TAIVKNTSLTMAIGLAELSYASRQVETETLLAFQSFAAATALYLALVLITQLLAQR 237



 Score = 41.1 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  G + T WL+   +  A+++G  + A      + +    R++V + RN P +V 
Sbjct: 16  YLIWLGKGALLTGWLSLLVIAAASLLGIALTALLDGGPRPLRLATRLFVGLHRNTPLMVQ 75

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           +   Y  V  +LP      +      +    L+ P  + +  A     + 
Sbjct: 76  LLLWYFGVSGLLPDEAKIWLNTPRALMLPFDLALPWPSFEFLAAFTALTL 125


>gi|153821979|ref|ZP_01974646.1| amino acid ABC transproter, permease protein [Vibrio cholerae B33]
 gi|126520518|gb|EAZ77741.1| amino acid ABC transproter, permease protein [Vibrio cholerae B33]
          Length = 114

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 64/108 (59%)

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+ +I + R QMEA++++G+T  +A R ++LPQA R  +P L + +++++K++SLA  +
Sbjct: 1   IRAAIIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTL 60

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G A++++      + + +  E  L    IY  + +++    +    K+
Sbjct: 61  GVAEIMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 108


>gi|296162378|ref|ZP_06845171.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295887411|gb|EFG67236.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 235

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 4/233 (1%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F    +    ++    + T   + V + VL  +  +     +   + +      L 
Sbjct: 1   MSLDFTWLADPLYQTWLLRGIGTTVAMCVCAIVLMFIFGIVG---AAVIYFRVPLLETLT 57

Query: 223 YISTFLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            I   L+   P LV +  L + L      +          V   F  + ++L+ Y     
Sbjct: 58  TIVVELLRNTPPLVQLFVLYFTLSELGLSVRSLATGQQIPVFSGFTCVVLSLALYNGGIA 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVRSGL AVP   ++AA +LG +  +    + LP AMR    P+T+  ++L+K SS A
Sbjct: 118 VEIVRSGLHAVPDATVDAARSLGYSRLRTFWHIQLPMAMRLSTVPMTNNIVSLIKTSSQA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             V  AD++     I  +  +  E++L+    YL+L+   +    R+   + +
Sbjct: 178 AFVAVADVMYYATQITLENFRNFEVMLVVWGCYLALASFASTVAGRVGRAMRI 230



 Score = 43.8 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +D  Y T +L G   T  +    ++   I G +  A       L+  +  + VE+ RN
Sbjct: 7   WLADPLYQTWLLRGIGTTVAMCVCAIVLMFIFGIVGAAVIYFRVPLLETLTTIVVELLRN 66

Query: 139 IPPLVVIFFLYKSVLSV 155
            PPLV +F LY ++  +
Sbjct: 67  TPPLVQLFVLYFTLSEL 83


>gi|91787396|ref|YP_548348.1| amino acid ABC transporter permease [Polaromonas sp. JS666]
 gi|91696621|gb|ABE43450.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas sp. JS666]
          Length = 220

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 69/134 (51%)

Query: 264 PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSI 323
           P  ++  +A+     A+  EIVR+GL A P GQ+EAA++L LT R+    V+LP A+  I
Sbjct: 87  PVELACVLAMVLNLGAYACEIVRAGLQATPEGQLEAAMSLALTPRQTFFHVVLPPALARI 146

Query: 324 IPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            P L SQ + ++  S++   +   +L      I ++T ++ E  ++    Y+ L+I +  
Sbjct: 147 WPALVSQIIIVMLGSAVCGQISAEELSQAANLISSRTFRSFESYIVVTVAYVLLAIGLRQ 206

Query: 384 FMNRLNAKIALKEK 397
            +  L  +     +
Sbjct: 207 SLYWLGPRFIFASR 220


>gi|148273185|ref|YP_001222746.1| putative glutamate ABC transporter, permease [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147831115|emb|CAN02067.1| putative glutamate ABC transpoter, permease component [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 274

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 6/178 (3%)

Query: 216 GKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSC 275
           G  L LL +S   +      V++    +     PVL    FI        + S+  AL+ 
Sbjct: 84  GMVLALLRMSEHRVIRYAVTVVL----EFFRGMPVLLMMLFIYLIFPIGPYWSVVTALAL 139

Query: 276 YTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLL 335
           Y  A I E +RSG++ +PRGQ EA +A+GL   +   LV  PQA R+++P + +Q + L+
Sbjct: 140 YNGAIIGEALRSGILGLPRGQREAGLAIGLRPLQNRLLVEFPQAFRTMLPIIVAQLVVLI 199

Query: 336 KNSSLAVAVGFADLVSVGGTIINQTGQ--AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           K+++L   V    L   G  I+  T +  ++ I ++ + +YL L++ ++    RL  K
Sbjct: 200 KDTALGTIVSLVGLTKQGELILEATSRDNSLPIFVVMVGMYLVLNLSVSTIARRLARK 257


>gi|83954097|ref|ZP_00962817.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83841134|gb|EAP80304.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 268

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 13/210 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            F+ V G +L+     +++       +     +I  FL  G P  +     Y L      
Sbjct: 48  FFALVSGFLLATAL-AVAKAHPSPWLRKPAEWFI--FLFRGSPLFIQFFFGYFLFLSLKS 104

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F        +  ++   I L   T+A+ AEI    L ++P+G  EAA A G++    
Sbjct: 105 VHPFF----DMFTSAWLGALIVLFFNTSAYSAEIFYGALQSIPKGDTEAADAYGISGWPR 160

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAI 364
            + ++ P  +R   P  T++ + L   ++L    GF       D +       ++T    
Sbjct: 161 FKRIIWPTMLRLAWPAYTNEAIFLFHATTLVFFTGFPALQQRGDALYYASYFADKTFNPF 220

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               I    ++ L+++I      +N ++  
Sbjct: 221 IPYPILAGYFILLTLVIIAIFGLINRRLNR 250


>gi|254671932|emb|CBA04286.1| polar amino acid transport system permease protein [Neisseria
           meningitidis alpha275]
          Length = 190

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A  FV   ++ + ++L     +     K    L   YIS  +I G P LV + + + 
Sbjct: 26  PLAAASFVIGMMIAVAVALVRIMPAGGIARKILLKLVEFYIS--VIRGTPLLVQLVIVFY 83

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                                   +  I  S    A+ +E +R+ +++VP+GQ EA  ++
Sbjct: 84  -----------GLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSI 132

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
           G+T+ +  R ++ PQA R  +PPL+++++ L K
Sbjct: 133 GMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFK 165


>gi|193084367|gb|ACF10023.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote AD1000-18-D2]
          Length = 710

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 95/147 (64%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D P         G  ++P F+++ + L+ +TA+ +AEIVR  + A+PRGQ+EAAI+L L
Sbjct: 559 IDAPGSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPRGQVEAAISLAL 618

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RLV+LPQA+RS++P + +Q++N+ KNSSLAV V ++D+  V   ++N  G+ I 
Sbjct: 619 NPFQRLRLVILPQALRSMVPLMNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLIP 678

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++ +  Y + S+ I+L MN  N ++
Sbjct: 679 LFILLLITYQAGSLAISLVMNWYNTRV 705



 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 3/166 (1%)

Query: 33  LALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL-V 91
             + L +  L+  ++    M+     +   F+ +   F+I+   +   ++S      L  
Sbjct: 253 FIMYLLLRVLYLQHDPDPVMQNR-WMVKFDFMDKVNTFKINPWPMLVEANSDARWLFLKA 311

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
             +N+  +    ++   I+GT+VG  RLS+NKL + +  VYVE+FRN+P  V++F +   
Sbjct: 312 AIINSARVTLLSIVLCVILGTIVGVTRLSSNKLASTMATVYVEIFRNLPLAVLLFLIATQ 371

Query: 152 VLSVLPIPDHSIVLPFG-MFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
                P+      L  G +F +N+G+ F T+       + + +  L
Sbjct: 372 YGIQAPLFIEERFLFGGAVFYSNQGIWFVTVASYQRLVMGLVALAL 417


>gi|191637274|ref|YP_001986440.1| Putative amino acid ABC transporter, permease protein
           [Lactobacillus casei BL23]
 gi|227533180|ref|ZP_03963229.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239629433|ref|ZP_04672464.1| polar amino acid ABC transporter [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|190711576|emb|CAQ65582.1| Putative amino acid ABC transporter, permease protein
           [Lactobacillus casei BL23]
 gi|227189194|gb|EEI69261.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|239528119|gb|EEQ67120.1| polar amino acid ABC transporter [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|327381314|gb|AEA52790.1| Putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Lactobacillus casei LC2W]
 gi|327384485|gb|AEA55959.1| Putative glutamine ABC transporter, glutamine-binding
           protein/permease protein [Lactobacillus casei BD-II]
          Length = 222

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 96/220 (43%), Gaps = 6/220 (2%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            +       ++ T+  I + + + GI +        R         L  +Y+S      +
Sbjct: 5   WQDWQQIIPSVWTSIYIALLAILFGIPIGCLI-AWIRVKRPPILNQLVGIYLSFARSVPM 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                I + Y L+F  P L      G     P  +    AL+ +++A+  E  R+   A+
Sbjct: 64  -----IVVLYILYFALPNLTTVLNGGKGLHIPATVVAVAALALFSSAYFGETFRAAYQAL 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
              Q+EAA+A GL+ R A + ++LPQA    +P + +  ++++K +++   +G  ++   
Sbjct: 119 DPAQLEAALASGLSKRTAMKRIVLPQAAALALPNVFNSVMDIVKGTAIIYNIGLLEITGT 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              + ++T Q I   L    IYL L  +++   + +  ++
Sbjct: 179 SILVGSKTYQFIPAYLAAWTIYLVLYWLVSAIFHLIKRQV 218


>gi|313891432|ref|ZP_07825048.1| ABC transporter, permease protein [Dialister microaerophilus UPII
           345-E]
 gi|313120207|gb|EFR43383.1| ABC transporter, permease protein [Dialister microaerophilus UPII
           345-E]
          Length = 229

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   I + S     +L LF   +       T K   +  +S F +  +  +  + L +  
Sbjct: 24  TTLAISLLSVAGSCILGLFVGLIM------TLKNPFIQLLSKFYLEFMRIMPQLVLLFIA 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F        +  G       F +       +  A + ++VRS + ++P+ Q E+A ALG
Sbjct: 78  YFGIAKAFNIHISG-------FTASLTVFILWGMAEMGDLVRSAVESIPKNQYESAAALG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-- 362
            +  +  R +++PQA+  ++PP  + +  ++K +SL V +G  +++  G  +I       
Sbjct: 131 FSKFQMYRFIIIPQAVGFLLPPAINLFTRIIKTTSLVVMIGVVEVLKTGQQLIEANRYTS 190

Query: 363 ---AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              A+ +  +  F+Y      ++   + L  K
Sbjct: 191 PDAALPMYGLIFFLYFFSCWPLSKLSSYLEKK 222



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 34/87 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +  + I+G  VG      N  +  + + Y+E  R +P LV++F  
Sbjct: 18  LLQGLRTTLAISLLSVAGSCILGLFVGLIMTLKNPFIQLLSKFYLEFMRIMPQLVLLFIA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRG 175
           Y  +     I          +F+    
Sbjct: 78  YFGIAKAFNIHISGFTASLTVFILWGM 104


>gi|308234954|ref|ZP_07665691.1| Putative Glutamate transport ATP-binding protein gluA [Gardnerella
           vaginalis ATCC 14018]
 gi|311114261|ref|YP_003985482.1| ABC transporter permease [Gardnerella vaginalis ATCC 14019]
 gi|310945755|gb|ADP38459.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Gardnerella vaginalis ATCC 14019]
          Length = 297

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 106/258 (41%), Gaps = 11/258 (4%)

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI 198
           I  LV++     ++      P        G +     L      +  N ++ VF+ +   
Sbjct: 45  ISTLVLLGVCVAALAMSPGWPRVRETFFSGKYF-MLSLPSVLQGLMLNLQVLVFAVIGVA 103

Query: 199 VLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
           +L      +             +    T ++ G+P LV++   Y + F  P L  F  I 
Sbjct: 104 ILGTLIAVIRTSVSPMLFPLRAIAQFYTTIMRGIPMLVVL---YLIGFGIPGLQLFGRI- 159

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                P  +   IA+    +A++ E++R+G   V      +A +LGLT  +  RLV++P 
Sbjct: 160 -----PPAILGTIAIVMSYSAYVGEVLRAGFEDVHPSMRASARSLGLTSGQTVRLVVIPL 214

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
            +R + P L + ++++ K++ L   +G  D V      +  +       ++   ++++LS
Sbjct: 215 GLRKVAPALMNDFISMQKDAGLISVLGAVDAVRAAQISVATSYN-FTPYVVASVVFIALS 273

Query: 379 IMIALFMNRLNAKIALKE 396
           I   +  +   A++  +E
Sbjct: 274 IPFIVLNDWYTARLRKRE 291



 Score = 36.8 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 3/67 (4%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL---VAWICRVYVEVFRNIPPLVVIF 146
           L G +    +    +I   I+GTL+   R S + +   +  I + Y  + R IP LVV++
Sbjct: 85  LQGLMLNLQVLVFAVIGVAILGTLIAVIRTSVSPMLFPLRAIAQFYTTIMRGIPMLVVLY 144

Query: 147 FLYKSVL 153
            +   + 
Sbjct: 145 LIGFGIP 151


>gi|330810055|ref|YP_004354517.1| ABC transporter, permease component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327378163|gb|AEA69513.1| ABC transporter, permease component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 221

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 15/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F      R L           +    S + G++++L  T + R    +  + +  
Sbjct: 1   MFDYSFQWRPALRALPDMLAGAWVTFETAALSMIFGVLIALVLTVM-RQAPNRLLRGVGN 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++S            +   Y L+F    L              +++L   ++   A ++
Sbjct: 60  GWVSIARNTPS-----LFQIYILYFGLGSL--------GLHVSSWLALLAGITFNNAGYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R GL AVP  QM AA +LG++  +A R++++PQ +R +  PLT+Q +  +  +SL 
Sbjct: 107 AENFRGGLKAVPSTQMRAARSLGMSAFQAYRMIIVPQLLRIVFYPLTNQMVWAVLMTSLG 166

Query: 342 VAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V VG   DL  V      +T +  E   +   +Y  ++ +I      L+ ++
Sbjct: 167 VVVGLNNDLTGVTQEYNVKTFRTFEYFALAAVLYYLIAKLIVGLARLLSWRL 218



 Score = 41.5 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 41/99 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   TF  A   MI   +I  ++   R + N+L+  +   +V + RN P L  I+ L
Sbjct: 18  MLAGAWVTFETAALSMIFGVLIALVLTVMRQAPNRLLRGVGNGWVSIARNTPSLFQIYIL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  + S+       + L  G+  NN G           A
Sbjct: 78  YFGLGSLGLHVSSWLALLAGITFNNAGYLAENFRGGLKA 116


>gi|237665697|ref|ZP_04525685.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|237658644|gb|EEP56196.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 225

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 81/183 (44%), Gaps = 12/183 (6%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +T K   +L+++   +     +  +   +  +F        N  G +          I  
Sbjct: 47  RTSKYKIVLFLNRVYLEAFRIIPTLVWLFIFYFGVTTALNINLSGEAVS-------IIVF 99

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + AA + +IVR  L ++P+ Q+E+  ALGL + +  R +++PQA+R ++P   +    
Sbjct: 100 TLWGAAEMGDIVRGALQSLPKHQIESGKALGLNNFQLYRYIMIPQAVRRMLPGTINLATR 159

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRL 388
           ++K +SL V +G  D+V +G  II  +          I     F+Y  +   ++     L
Sbjct: 160 MVKTTSLVVLIGVIDVVKIGQQIIETSRFEFPTASFWIYGFIFFLYFIICYPLSKISKNL 219

Query: 389 NAK 391
             K
Sbjct: 220 EQK 222


>gi|225019523|ref|ZP_03708715.1| hypothetical protein CLOSTMETH_03476 [Clostridium methylpentosum
           DSM 5476]
 gi|224947744|gb|EEG28953.1| hypothetical protein CLOSTMETH_03476 [Clostridium methylpentosum
           DSM 5476]
          Length = 223

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 5/162 (3%)

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFM-----SLYIALSCYTAAFIAEIVRSGLIAVPR 294
           +  +L  + P+L Q  F+         M        I LS    +++AE  RSG  AV +
Sbjct: 55  IYIELSRNTPLLIQLFFLFYGLPKIGVMISAQACAVIGLSFLGGSYMAESFRSGFEAVGK 114

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+EA +++GLT R+ TR ++LPQA    IP LT+  + LLK +S+  A+  ADL+ V  
Sbjct: 115 TQLEAGMSIGLTRRQLTRYIILPQAFSVSIPSLTANAIFLLKETSIFSAIALADLMFVAK 174

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +I    +  E + + +  YL + + +++ +  +  ++   E
Sbjct: 175 DLIGMYYKTFEALSMLVASYLIILLPLSILLRWVERRVRYAE 216


>gi|291004254|ref|ZP_06562227.1| amino acid ABC transporter, permease protein [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 216

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 17/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                 V S VLG +L+       R       +A+   Y++         L L+   +  
Sbjct: 22  LFLLAGVGSLVLGTLLATL-----RVSPVPALRAVGTGYVTLLRNTP---LTLVFFFFVF 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            + K  L QF F         F +  IAL+ YT+AF+ E++RSG+  VP GQ EAA ++G
Sbjct: 74  AYPKLELLQFPF---------FTAAVIALTVYTSAFVCEVLRSGINTVPVGQAEAARSIG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L   ++   V+LPQA R+++PP+ S  + LLKN+++A      ++ SV   +  +    I
Sbjct: 125 LGFAQSLTNVILPQAFRAVVPPMVSVLIALLKNTTVAAGFSVNEVGSVIPFLNEEGEPTI 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +     +L L I + L       + ++  
Sbjct: 185 NAFVWIAVGFLILVIPLTLIQRGFEKRWSVAR 216



 Score = 43.0 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GF+ T  L     + + ++GTL+   R+S    +  +   YV + RN P  +V
Sbjct: 8   YGDVLARGFLRTIELFLLAGVGSLVLGTLLATLRVSPVPALRAVGTGYVTLLRNTPLTLV 67

Query: 145 IFFLYKSVLSV 155
            FF   +   +
Sbjct: 68  FFFFVFAYPKL 78


>gi|256851552|ref|ZP_05556941.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 27-2-CHN]
 gi|260660975|ref|ZP_05861890.1| glutamine ABC transporter permease [Lactobacillus jensenii
           115-3-CHN]
 gi|256616614|gb|EEU21802.1| glutamine ABC transporter permease component [Lactobacillus
           jensenii 27-2-CHN]
 gi|260548697|gb|EEX24672.1| glutamine ABC transporter permease [Lactobacillus jensenii
           115-3-CHN]
          Length = 102

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/99 (39%), Positives = 59/99 (59%)

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
           GQME A + G+T+ +A R V+LPQA +  IP L +Q++NL+KNSS+   V   DL+  G 
Sbjct: 4   GQMEGARSNGMTYMQAMRFVILPQAFKVAIPSLGNQFINLIKNSSVLAFVAGFDLMYQGD 63

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            I   + Q +   L+    YL L++ ++ +M  L  KIA
Sbjct: 64  VIAFSSFQTVNTYLVVGCFYLVLTLPLSYYMRYLEKKIA 102


>gi|116254851|ref|YP_770687.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115259499|emb|CAK10637.1| putative permease component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 241

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 80/178 (44%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL + T LI  +P L+LI   Y    D                  F++    L     A+
Sbjct: 62  LLDLYTTLIRAVPELILIVGLYYAGTDGLNRLLAALELPPVNVNGFVAAVAVLGFVQGAY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E++R  ++A+P GQ+EAA A G+      R VLLP  + + +P L + ++++ K+S+L
Sbjct: 122 MTEVLRGAILAIPVGQIEAAKAFGMGPVLRFRRVLLPALLPNALPGLANLWMSVTKDSAL 181

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              VG+ +L          T       L    +YL+++++  +    +  ++   + +
Sbjct: 182 VAVVGYQELALATRLAGASTKHYFVFFLASALLYLAITLVSNVVFKLIEGRVRRGQPR 239


>gi|158321703|ref|YP_001514210.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
 gi|158141902|gb|ABW20214.1| polar amino acid ABC transporter, inner membrane subunit
           [Alkaliphilus oremlandii OhILAs]
          Length = 225

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 18/226 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +    + +      +   A+I   S ++G VL +    L      K  + +  LY+ TF 
Sbjct: 8   IVFTEQNIMRLLGGLGVTARIAFISILIGSVLGIVFG-LIMTSKSKWIRFISRLYLETFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I       ++   Y ++F        +  G            I  S +  A + +IVR  
Sbjct: 67  IIP-----ILVWLYIVYFGITSALNIHLDGEIV-------AIIVFSFWGIAEMGDIVRGS 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P+ QME+  ALGL+  +  R VL+PQA+R ++P   +    ++K +SL   +G  +
Sbjct: 115 LESLPKHQMESGKALGLSFIQLYRYVLIPQAVRRMVPGAINLATRMVKTTSLVTLIGAVE 174

Query: 349 LVSVGGTIINQTG-----QAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +V VG  II+ +       +  I      +Y  +   ++L   +L 
Sbjct: 175 VVKVGQQIIDASRFQIDTASFWIYGFIFILYFIICYPLSLLSKKLE 220



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 44/85 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +AF  ++  +++G + G    S +K + +I R+Y+E FR IP LV ++ +
Sbjct: 18  LLGGLGVTARIAFISILIGSVLGIVFGLIMTSKSKWIRFISRLYLETFRIIPILVWLYIV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + S L I     ++   +F   
Sbjct: 78  YFGITSALNIHLDGEIVAIIVFSFW 102


>gi|325836786|ref|ZP_08166253.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
 gi|325491164|gb|EGC93453.1| ABC transporter, permease protein [Turicibacter sp. HGF1]
          Length = 219

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 16/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
           ++ + +          AK+ +   +LGI+LS    F   L R++     + +  +YI   
Sbjct: 1   MDFQFIKTYAPMYVEAAKLTMSIALLGILLSTLVGFICCLIRYYKIPILQRVIGMYIE-- 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L    P L+ +   + L+F  P LG F           +    + L+    +++AE  RS
Sbjct: 59  LSRNTPLLIQL---FFLYFGLPKLGIF--------LSSYACGVLGLTFLGGSYMAEAFRS 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL ++P  QME+ ++LGLT  +    ++ PQA+   +P  ++  + L+K +S+   V  A
Sbjct: 108 GLESIPDIQMESGLSLGLTKWQVLCYIIFPQAVAVSLPAFSANVIFLIKETSVFSVVALA 167

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL+ V   +I    +  E +L+ +  YL L + I+L ++ +  K+ 
Sbjct: 168 DLMYVAKGLIGLYYKTDESLLMLVVAYLVLLLPISLILSVIEKKVR 213



 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 39/82 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +    +YA   +     T  +A  G++ +T++G +    R     ++  +  +Y+E+ 
Sbjct: 1   MDFQFIKTYAPMYVEAAKLTMSIALLGILLSTLVGFICCLIRYYKIPILQRVIGMYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPI 158
           RN P L+ +FFLY  +  +   
Sbjct: 61  RNTPLLIQLFFLYFGLPKLGIF 82


>gi|319405829|emb|CBI79461.1| ABC transporter, permease protein [Bartonella sp. AR 15-3]
          Length = 234

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 84/225 (37%), Gaps = 2/225 (0%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
            L    F N         +      + +   +LG+ L L    +    + K  K    L+
Sbjct: 4   SLSLLSFSNGGWGVVILTSAGMTLSLALCCLILGLPLGLM-NAIMIQSNIKILKVTATLF 62

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            S F       L L  + Y L      +  F  I        F++  IA S   AAF  E
Sbjct: 63  SSVFRGL-PEILTLFFVYYGLQNFIQAIFDFLNIDIIFSINAFIAAIIAFSAVFAAFSCE 121

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           +  +      + Q EAA  LGL        ++ PQ   + +P L++ +L LLK++SL   
Sbjct: 122 VWLAAFNMFDKSQYEAAQVLGLPCSTTFFRIVFPQLFHNALPGLSNNWLTLLKDTSLVST 181

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +   DL+         T + I   L+   +YL  S   +  ++ L
Sbjct: 182 ISLLDLMRQTNLAATATNEPILFYLVACLLYLLFSAASSTILHYL 226


>gi|49078214|gb|AAT49762.1| PA1258 [synthetic construct]
          Length = 222

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 15/209 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   S + GI+++L     +R    +  +A    +IS  +    P L  I + Y  
Sbjct: 24  VTLQVTALSMLFGILIALLL-AFARLGGNRPLRAAAGAWIS--IARNTPALFQIYILY-- 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           + +L   ++   A ++AE  R GL AVP  Q+ AA +LG
Sbjct: 79  ---------FGLGSFGLHVSSWFALLAGVTFNNAGYLAETFRGGLQAVPETQLRAARSLG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQA 363
           ++  +A RLV++PQ +R +  PLT+Q +  +  +SL V VG   DL  V   +  +T + 
Sbjct: 130 MSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTDDLTGVTQALNVKTFRT 189

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E   +   +Y +++ ++ L    L  ++
Sbjct: 190 FEYFALAAVLYFAMAKLLVLAARLLGWRL 218



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 38/99 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    M+   +I  L+   RL  N+ +      ++ + RN P L  I+ L
Sbjct: 18  MLAGSLVTLQVTALSMLFGILIALLLAFARLGGNRPLRAAAGAWISIARNTPALFQIYIL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  + S          L  G+  NN G    T      A
Sbjct: 78  YFGLGSFGLHVSSWFALLAGVTFNNAGYLAETFRGGLQA 116


>gi|262202138|ref|YP_003273346.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           bronchialis DSM 43247]
 gi|262085485|gb|ACY21453.1| polar amino acid ABC transporter, inner membrane subunit [Gordonia
           bronchialis DSM 43247]
          Length = 223

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 12/230 (5%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              +  +      +T+       + + + G++L+       +       +     Y++  
Sbjct: 5   WDSMGPQLWPAFWVTIQLTFFSAIGALIWGVILAGM-----KVSPVPVMRGFATAYVNIV 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               L TL+++     L ++  V         +  +  F    +    YTA F+ E +RS
Sbjct: 60  RNTPL-TLIILFCAIGLSYNLGVT-----FSSTLKTNNFWLAVLGFIVYTATFVCETLRS 113

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G   VP GQ EAA +LGL+  +   +++LPQA+RS+I PL S  + L KN+++A A+G A
Sbjct: 114 GFNTVPIGQAEAARSLGLSFTQVFGIIVLPQAIRSVIGPLGSVLIALTKNTTIASAIGVA 173

Query: 348 DLVSVGGT-IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +   +  T I   + Q   I  I    ++ +++        L  ++ +K 
Sbjct: 174 EASLLMKTEIETYSDQLFVIFGIIAVGFMIITLTEGAIFGYLAKRLGVKR 223



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            S    +   F  T  L F   I A I G ++   ++S   ++      YV + RN P  
Sbjct: 6   DSMGPQLWPAFWVTIQLTFFSAIGALIWGVILAGMKVSPVPVMRGFATAYVNIVRNTPLT 65

Query: 143 VVIFFLYKSV 152
           ++I F    +
Sbjct: 66  LIILFCAIGL 75


>gi|218658149|ref|ZP_03514079.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli IE4771]
          Length = 177

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 93/187 (49%), Gaps = 13/187 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R       + + +++I       L TL+  A     +F  P           T     + 
Sbjct: 1   RRSRMPFIRGMSIVFIEFVRGVPLITLLFTASLLLNYFLPP----------GTNFDLILR 50

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
           + I +S +  A++AE++R GL A+PRGQ EA  +LGL + +A RLV++PQA++  IP + 
Sbjct: 51  VIIMVSLFATAYMAEVIRGGLAALPRGQYEAGESLGLDYWQAQRLVIMPQALKISIPSIV 110

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIALFM 385
           + ++ L K++++ V +G  D +++  +I   T   G   E++ + + ++      ++ + 
Sbjct: 111 NTFIGLFKDTTIVVFIGLLDPIALTNSIRATTDWQGIYWELLSLPVPLFFVCCFGMSRYS 170

Query: 386 NRLNAKI 392
             L  ++
Sbjct: 171 VHLEQRL 177


>gi|254475611|ref|ZP_05088997.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ruegeria sp. R11]
 gi|214029854|gb|EEB70689.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Ruegeria sp. R11]
          Length = 268

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 13/208 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + + G V++     L+++   K  +     +I  FL  G P  +     Y L      
Sbjct: 48  ALAVMAGFVMAN-GIALAKNSANKPIRKSAEWFI--FLFRGSPLFIQFFFAYFLFLQLKS 104

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +           S  ++   I L   TAA+ AEI    L ++P+G +EAA A GL+    
Sbjct: 105 VSSVF----DPFSAAWLGALIVLILNTAAYSAEIFYGALRSIPKGDIEAADAYGLSGWTR 160

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAI 364
            R ++ P  MR   P  T++ + L   ++L    GF       D +       ++T    
Sbjct: 161 FRRIMWPTMMRLAWPSYTNEAIFLFHATTLVFFSGFPAWRQQGDALYYANYFADKTFNPF 220

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKI 392
               I  F ++ L++ I      +N ++
Sbjct: 221 VPYPILAFYFILLTLCIIGLFGIINRRL 248


>gi|39939074|ref|NP_950840.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39722183|dbj|BAD04673.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 576

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 67/140 (47%), Gaps = 7/140 (5%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             ++I   P LV   + Y        L +F F   +T      + Y+ +   T  +I+EI
Sbjct: 413 YIWIIKSTPMLVQAFVSYFF------LKEFAFFQNATWYTPMFAAYMVIILNTMGYISEI 466

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +   +  + +GQ+EA+++LG+TH +  R ++LPQA++    P+ ++++  LK+  +   +
Sbjct: 467 ITKNISFLDKGQIEASLSLGMTHTQTMRYIVLPQAIKRSQTPILNEFIINLKDCVVFSML 526

Query: 345 -GFADLVSVGGTIINQTGQA 363
            G  D+      + +     
Sbjct: 527 GGIIDIACASNALYSSVASP 546


>gi|77405937|ref|ZP_00783017.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
 gi|77175448|gb|EAO78237.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae H36B]
          Length = 216

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 92/220 (41%), Gaps = 27/220 (12%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+  +    + S   G +L++      R+      K +  +YI           
Sbjct: 14  LQGFGLTLYISFISILLSMFFGTLLAIM-----RNSKNPIWKLIASIYIEFVR------- 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                      + P L     I          +   + + +T+A +AEI+R GL  V +G
Sbjct: 62  -----------NVPNLLWIFIIXXVFQMKSVSAGITSFTIFTSAALAEIIRGGLNGVDKG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGG 354
           Q EA ++ G T+ +   +++ PQA R ++P + SQ++ ++K++SL    +   ++     
Sbjct: 111 QTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQEIFGKSQ 170

Query: 355 TIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++ +     Q   +  I   +Y   + +I+ F  +L+ +
Sbjct: 171 ILMGRYFEAGQVFTLYAIITAVYFITNFIISSFSRKLSKR 210



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T +++F  ++ +   GTL+   R S N +   I  +Y+E  RN+P L+ IF +
Sbjct: 13  LLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLLWIFII 72

Query: 149 YKSV 152
               
Sbjct: 73  XXVF 76


>gi|242239705|ref|YP_002987886.1| arginine transporter permease subunit ArtM [Dickeya dadantii
           Ech703]
 gi|242131762|gb|ACS86064.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           dadantii Ech703]
          Length = 223

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 3/165 (1%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           KT     L  +   L  G P LV I L Y        + Q  ++      P ++    AL
Sbjct: 40  KTPLLSSLARVYITLFTGTPLLVQIFLIYYGPGQFESIRQIPWLWSLLSQP-WLCAVSAL 98

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           +  +AA+  ++    + A+P GQ ++  ALG+  R     +LLP A +  +   +++ + 
Sbjct: 99  ALNSAAYTTQLFYGAVRAIPAGQWQSCAALGMNRRDTL-HILLPFAFKRALSSYSNEVVL 157

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           + K +SLA  +   +++  G  +  +T   + +      +YL ++
Sbjct: 158 VFKGTSLAYTITLMEVMGHGQLLYGRTYDVL-VFGAAGIVYLCVN 201


>gi|313106242|ref|ZP_07792491.1| putative amino acid ABC transporter permease [Pseudomonas
           aeruginosa 39016]
 gi|310878993|gb|EFQ37587.1| putative amino acid ABC transporter permease [Pseudomonas
           aeruginosa 39016]
          Length = 214

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 15/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L F      T   I   + ++G +L +    L       +     LL + 
Sbjct: 1   MFTTSLTANDLLFLLQGAWTTLAITAMAMLIGTLLGVVFGLLRALLPRASLPLAALLDV- 59

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 +P L+   L          L  F  I G      F    + L  Y AA+  E+V
Sbjct: 60  ---FRSVPLLIQFVL----------LNSFKSILGLD-WSAFAVACLVLGVYAAAYCTEVV 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ +VP     AA +LGL++R+    ++LP A R   P   +  L+++K++SL + +G
Sbjct: 106 RGGVFSVPPSVRRAARSLGLSYRQDLFHIVLPMAARVAFPGWVNLTLSVMKDTSLVLWIG 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+    TI+ +  + + ++ I   +Y  +S ++A    RL  +
Sbjct: 166 IVELLRASQTIVTRIQEPLFVLCIAGLVYYLMSWVVARLGARLERR 211


>gi|239833587|ref|ZP_04681915.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
 gi|239821650|gb|EEQ93219.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Ochrobactrum intermedium
           LMG 3301]
          Length = 284

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 13/256 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGI--V 199
           LV+I        S +       +  +   L +  +    +   +    F+ +  LG+  V
Sbjct: 38  LVLIVIAIALFASAVVFGRWDWLPQYLPRLGSGIVVTLFMLFGSAILGFMLALPLGLLQV 97

Query: 200 LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGG 259
              +             +  PLL     L +GL +L       +  F  P L +      
Sbjct: 98  TGPWWLSWPAKAFCTVIRGTPLLLQLWLLYYGLGSLFPSIPGIRGSFIWPYLRE------ 151

Query: 260 STVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQA 319
                 +     AL+   AA+  E++R     VP G+++A  A G++  K  R + LP+A
Sbjct: 152 -----AWPYGLAALTISFAAYEGEVMRGAFAGVPSGELQAGRAFGMSPWKVFRRIWLPRA 206

Query: 320 MRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
           +   +P L  + +  LK + L   +   D+  V   +  +T    E +L+   IY+ L+ 
Sbjct: 207 IHRALPTLNGETVLQLKATPLVATITVVDVYGVVSRVRQETYLTYEPLLLLALIYMILTA 266

Query: 380 MIALFMNRLNAKIALK 395
            + L   RL  +I  +
Sbjct: 267 GLVLVFRRLENRIPTR 282



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 14/167 (8%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +  G V T ++ F   I   ++   +G  +++    ++W  + +  V R  P L+
Sbjct: 62  QYLPRLGSGIVVTLFMLFGSAILGFMLALPLGLLQVTGPWWLSWPAKAFCTVIRGTPLLL 121

Query: 144 VIFFLYKSVLSVLP----------IPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
            ++ LY  + S+ P           P      P+G+       +     +   A   V S
Sbjct: 122 QLWLLYYGLGSLFPSIPGIRGSFIWPYLREAWPYGLAALTISFAAYEGEVMRGAFAGVPS 181

Query: 194 --FVLGIVLSLFATRLSRHFHEK--TGKALPLLYISTFLIFGLPTLV 236
                G    +   ++ R         +ALP L   T L      LV
Sbjct: 182 GELQAGRAFGMSPWKVFRRIWLPRAIHRALPTLNGETVLQLKATPLV 228


>gi|114705498|ref|ZP_01438401.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506]
 gi|114538344|gb|EAU41465.1| ABC transporter permease protein [Fulvimarina pelagi HTCC2506]
          Length = 224

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 64/204 (31%), Positives = 93/204 (45%), Gaps = 16/204 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS---RHFHEKTGKALPLLYIST 226
           F N   L      +       +   VL IVL L    L    R +  K  + L ++YI  
Sbjct: 7   FFNVDVLLRYYPLLLEGLWRTIALGVLSIVLGLIGGLLLAIARLYGAKPVRFLAIVYIDV 66

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F    +P LV + + Y   +  P L              F S   AL+  ++A+ AEI R
Sbjct: 67  F--RAIPVLVWLVIVY---YALPFL--------GVRLSAFASATTALTMISSAYTAEIYR 113

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AVPRGQ EAA ++GL      R V+LPQA+R +IPPLT+  +N+LK+++LA  V  
Sbjct: 114 AGIEAVPRGQFEAAQSIGLGSFDLMRDVVLPQAIRIVIPPLTNNSINVLKDTALASVVAL 173

Query: 347 ADLVSVGGTIINQTGQAIEIILIW 370
            DL+               +I   
Sbjct: 174 PDLLKQATQAQALAANPTPLIGAA 197



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 36/83 (43%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           +I            Y   +L G   T  L    ++   I G L+   RL   K V ++  
Sbjct: 2   DIVSTFFNVDVLLRYYPLLLEGLWRTIALGVLSIVLGLIGGLLLAIARLYGAKPVRFLAI 61

Query: 131 VYVEVFRNIPPLVVIFFLYKSVL 153
           VY++VFR IP LV +  +Y ++ 
Sbjct: 62  VYIDVFRAIPVLVWLVIVYYALP 84


>gi|300310827|ref|YP_003774919.1| amino acid ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gi|300073612|gb|ADJ63011.1| ABC-type amino acid transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 231

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/243 (20%), Positives = 102/243 (41%), Gaps = 21/243 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      + L    +      ++   S + G+ + +F   +S H   K  +     
Sbjct: 1   MQYDFQFAFIFQHLDQLLVGALLTIRLSALSMICGLAVGIFGAIISIH-GSKPARLAVTS 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+   LI   P LV + + +           F            ++  +A++    A+  
Sbjct: 60  YVE--LIRSTPFLVQLFIIF-----------FGLPSIGVQVDANIAALVAMTVNLGAYST 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EIVR+G++A+   Q+EAA AL +T  +  R V+L  A+  + P L SQ+  ++  SS+  
Sbjct: 107 EIVRAGMMAIHPSQIEAAQALAMTRWQVIRHVVLTPALEKVYPALASQFTLMMLASSIVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYL-------SLSIMIALFMNRLNAKIALK 395
           A+   +L +    +  +T ++ EI L+ M +Y+           +I L + +   ++ + 
Sbjct: 167 AISAEELTATANLLDAETFRSFEIYLVVMVLYILLALLFRLAFWLIGLVVFKRRRRLGVA 226

Query: 396 EKK 398
             +
Sbjct: 227 RPR 229



 Score = 40.3 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            +   +LVG + T  L+   MI    +G       +  +K        YVE+ R+ P LV
Sbjct: 12  QHLDQLLVGALLTIRLSALSMICGLAVGIFGAIISIHGSKPARLAVTSYVELIRSTPFLV 71

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
            +F ++  + S+    D +I     M +N    S   +     A 
Sbjct: 72  QLFIIFFGLPSIGVQVDANIAALVAMTVNLGAYSTEIVRAGMMAI 116


>gi|256375587|ref|YP_003099247.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
 gi|255919890|gb|ACU35401.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinosynnema mirum DSM 43827]
          Length = 215

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 17/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            ++  L     T+       V S VLG +L++      R       +A    Y++     
Sbjct: 7   YSDLFLKAFGTTLQLFLFSAVGSLVLGTILAML-----RVSPVPVLRAAGATYVTVLRNT 61

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  +      +   F  P+L              F    ++L+ YT+AFI E++RSG+ 
Sbjct: 62  PLTLV-----FFFFAFAYPLLKILEL-------DPFKGAVVSLTVYTSAFICEVIRSGIN 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP GQ EA+ ALGL+  +    V+LPQA+R+++PPL S  + LLKN+++A      D  
Sbjct: 110 TVPVGQAEASRALGLSFGQMLGNVVLPQALRTVVPPLASTMIALLKNTTIAAGFSVGDAG 169

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++  T        +  +    FI++ L + +      L  + ++  
Sbjct: 170 AIMYTFSEDGVNMLVGLGWVAFIFILLVLPLTAVQRGLERRWSVAR 215



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y+   L  F  T  L     + + ++GT++   R+S   ++      YV V RN P  +
Sbjct: 6   NYSDLFLKAFGTTLQLFLFSAVGSLVLGTILAMLRVSPVPVLRAAGATYVTVLRNTPLTL 65

Query: 144 VIFFLYKSVL 153
           V FF   +  
Sbjct: 66  VFFFFAFAYP 75


>gi|54288344|gb|AAV31632.1| predicted abc-type amino acid transport system permease component
           [uncultured alpha proteobacterium EBAC2C11]
          Length = 224

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 109/233 (46%), Gaps = 18/233 (7%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F ++ +   L        T+  + V + + G + +     +SR+      + +   YI 
Sbjct: 5   FFEIYRSVEYLGLILSGALTSLSLTVAAGIFGFMFAFLL-AMSRYRKIPIVEYIAAAYID 63

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I   P +V +   + + F  P+L  +       V P +    +AL+   + + AEI+
Sbjct: 64  F--IRNTPLIVQL---FFIAFGLPMLFGY-------VWPFWCHALLALTINFSGYFAEIL 111

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG  +  +GQ+EAA AL L++R     +++PQ +  + P L+SQ++ L   + +   +G
Sbjct: 112 RSGFASTQKGQLEAAAALNLSNRTIFGSIIVPQTLIKMYPSLSSQFIFLFLTTGVISEIG 171

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA-----LFMNRLNAKIA 393
             DL   G  I ++T ++ E+ +    IY+++++ +      +F   L  ++A
Sbjct: 172 VEDLTHAGLYIDSRTFRSFEVFITLTAIYVAIALFLRASLKLIFSKTLGRRVA 224



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   IL G + +  L  +  I   +   L+   R     +V +I   Y++  RN P +V 
Sbjct: 14  YLGLILSGALTSLSLTVAAGIFGFMFAFLLAMSRYRKIPIVEYIAAAYIDFIRNTPLIVQ 73

Query: 145 IFFLYKSVLSVLPIPDHSI 163
           +FF+   +  +        
Sbjct: 74  LFFIAFGLPMLFGYVWPFW 92


>gi|121604398|ref|YP_981727.1| polar amino acid ABC transporter inner membrane subunit
           [Polaromonas naphthalenivorans CJ2]
 gi|120593367|gb|ABM36806.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Polaromonas naphthalenivorans CJ2]
          Length = 223

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/112 (33%), Positives = 67/112 (59%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              + +   AL     A+  EI+R+G+ ++P+GQ+EA +AL L   +  R V+L  A+++
Sbjct: 87  WSAYTAALTALVINLGAYATEIIRAGIESIPKGQIEAGLALNLKRHEIFRFVILKPALKA 146

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIY 374
           I P LTSQ++ L+ +S++  A+   DL SV   + +QT ++ EI ++   IY
Sbjct: 147 IYPALTSQFILLMLSSAVVSAISADDLTSVAANLQSQTFRSFEIYIVVAGIY 198


>gi|33591940|ref|NP_879584.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
 gi|33599320|ref|NP_886880.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
 gi|33571584|emb|CAE41073.1| glutamate/aspartate transport system permease protein [Bordetella
           pertussis Tohama I]
 gi|33575366|emb|CAE30829.1| glutamate/aspartate transport system permease protein [Bordetella
           bronchiseptica RB50]
          Length = 227

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 101/208 (48%), Gaps = 7/208 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             + + S   G+VL      ++R +  +       +Y++ F      +L L+ + + ++F
Sbjct: 25  LLLTLSSAAGGVVLGALL-AIARLYGRRWVAWPAAIYVNLFR-----SLPLVLVIFLIYF 78

Query: 247 DKPVLGQFNFIGGSTVSPEFM-SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
             P L Q+       +      S ++    + AA+ +EI+R+G+ +V  GQ  A  ALGL
Sbjct: 79  ILPYLLQWITQAERPIVLGATGSAFVTFILFEAAYFSEIIRAGIGSVGPGQYAAGSALGL 138

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
           TH +  R V+LPQA+R+++P L +Q + + + ++L   +   D +     I  +  + +E
Sbjct: 139 THGQVLRKVILPQAVRNMLPVLLTQVIVIFQETALVYVLSLPDFLGAATKIAQRDNRLVE 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           + ++   ++  LS   +  +  L A++ 
Sbjct: 199 MYVLVAVVFFVLSFTASRGVRALRARLG 226



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 10/161 (6%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   +  L  S      ++G L+   RL   + VAW   +YV +FR++P ++VIF +
Sbjct: 17  FLTGLRFSLLLTLSSAAGGVVLGALLAIARLYGRRWVAWPAAIYVNLFRSLPLVLVIFLI 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF--------VLGIVL 200
           Y  +  +L     +          +  ++F        ++I               G  L
Sbjct: 77  YFILPYLLQWITQAERPIVLGATGSAFVTFILFEAAYFSEIIRAGIGSVGPGQYAAGSAL 136

Query: 201 SLFATRLSR--HFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
            L   ++ R     +     LP+L     +IF    LV + 
Sbjct: 137 GLTHGQVLRKVILPQAVRNMLPVLLTQVIVIFQETALVYVL 177


>gi|13488461|ref|NP_109468.1| ABC transporter [Mesorhizobium loti MAFF303099]
 gi|14028215|dbj|BAB54807.1| ABC transporter [Mesorhizobium loti MAFF303099]
          Length = 232

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 89/238 (37%), Gaps = 18/238 (7%)

Query: 155 VLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK 214
             P       L   + +    L    +T++  A   VF+    +V  +     ++     
Sbjct: 3   ATPFSKKWWHLVSMLEIWLGILQGLGITLEVTAYGLVFAIPFALVFGV-----AQFLTTG 57

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
             + L    I  +    +  L+ +      ++  PV+                   + L 
Sbjct: 58  MTRFLVTAVIEFWRSSAVVVLLFVF-----YYVLPVM--------GVTLSALTVSALVLG 104

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
             T  + ++ VR+GL ++P GQ EA +ALGL+      L+ LPQA+ ++ P   +  + L
Sbjct: 105 LNTGGYASQAVRAGLQSLPAGQREAGMALGLSRPAILLLIELPQALVTMSPTFINNLIQL 164

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           +K +SL   V   D+      I       + I    +  +  +   IAL    L A++
Sbjct: 165 VKATSLVSLVTLTDMTFRAKEIAQTQYDPVAIYSALLLAFFVVCYPIALAGRWLEARV 222


>gi|227820382|ref|YP_002824353.1| amino acid ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227339381|gb|ACP23600.1| probable amino acid ABC transporter, permease protein
           [Sinorhizobium fredii NGR234]
          Length = 223

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 82/223 (36%), Gaps = 14/223 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F               +    ++     V GI L +      R       K +   
Sbjct: 1   MNYQFEFGWLVEYYPQIAKGIAITIQLIAVGAVAGISLGIV-CAWVRALGPAWLKPVVAA 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y+                       +     F          E  +  IA+     A+  
Sbjct: 60  YVELIRNTPFLI-------------QLFFIFFGLPSLGLKLSELQAANIAMVVNLGAYSC 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R+G+ A P+GQ EA  +L +T  +  R V+L  ++  I P L+SQ + ++  S++  
Sbjct: 107 EIIRAGIQATPKGQFEAGSSLAMTPFETFRHVVLIPSLERIWPALSSQVVIVMLGSAVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            +   DL      I ++T +A E  ++   +YL L+I++   +
Sbjct: 167 QIAAEDLTFAANFIQSRTFRAFEAYMVSTAVYLLLAILLRQVL 209


>gi|302024084|ref|ZP_07249295.1| amino acid ABC transporter, permease protein [Streptococcus suis
           05HAS68]
 gi|330832441|ref|YP_004401266.1| ABC-type amino acid transport system, permease [Streptococcus suis
           ST3]
 gi|329306664|gb|AEB81080.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis ST3]
          Length = 219

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 92/222 (41%), Gaps = 27/222 (12%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
            +   LT+  ++   + S + G++L++      R+      K +  +YI           
Sbjct: 17  WNGLKLTLYISSISVILSILFGMILAIM-----RNGKNPIFKWIATIYIEFVR------- 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                      + P L     +          +   A + +T A +AEI+R GL A+  G
Sbjct: 65  -----------NVPNLLWIFTVFLVFQMKSTPAGITAFTIFTTAAMAEIIRGGLNAIGPG 113

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGG 354
           Q EA ++ G T  +    +++PQA+R ++P + SQ + ++K++S L   +   +L     
Sbjct: 114 QTEAGLSQGFTPVQIMVYIIMPQAIRKMLPAIISQIVTVIKDTSFLYSVIALQELFGSSQ 173

Query: 355 TIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            ++ +     Q   + L+   IY S++  I+     +    A
Sbjct: 174 ILMGRYFEAEQVFALYLMVALIYFSINFAISSLSRYVAKSWA 215



 Score = 39.9 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T +++   +I + + G ++   R   N +  WI  +Y+E  RN+P L+ IF +
Sbjct: 16  LWNGLKLTLYISSISVILSILFGMILAIMRNGKNPIFKWIATIYIEFVRNVPNLLWIFTV 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|291456587|ref|ZP_06595977.1| amino acid ABC transporter, permease protein [Bifidobacterium breve
           DSM 20213]
 gi|291381864|gb|EFE89382.1| amino acid ABC transporter, permease protein [Bifidobacterium breve
           DSM 20213]
          Length = 243

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 75/187 (40%), Gaps = 13/187 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R +       +  ++   F     P L+ +   Y             F          + 
Sbjct: 65  REYRVPVLAQISTVFEELF--RNTPLLIQLFFLYY-----------GFPSIGIKWSAEIC 111

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             + +S   +A+++   + G   +P+ Q E+A ALGL+  +  R V LPQ +   +P + 
Sbjct: 112 AVVGMSILGSAYMSGAFQGGFSGIPQVQNESARALGLSPLQMIRHVTLPQGLTRSVPAVA 171

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  + ++K +S+   +   +L +    +I    ++ E +L  +  Y  + I +++ +  L
Sbjct: 172 ANVIFMVKETSVFTVIAVPELTNTARDLIGMYYRSDEYLLELVIAYAIILIPLSVILTLL 231

Query: 389 NAKIALK 395
             ++   
Sbjct: 232 ERRVRRG 238



 Score = 36.8 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
               FV T  L+   ++ AT++G ++   R     ++A I  V+ E+FRN P L+ +FFL
Sbjct: 36  FGKAFVLTLRLSAISVVLATLLGLVLALLREYRVPVLAQISTVFEELFRNTPLLIQLFFL 95

Query: 149 YKSVLSVLPI 158
           Y    S+   
Sbjct: 96  YYGFPSIGIK 105


>gi|170516838|gb|ACB15240.1| glutamine transport system permease protein GlnP [uncultured marine
           group II euryarchaeote DeepAnt-15E7]
          Length = 681

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/147 (38%), Positives = 97/147 (65%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D P         G  ++P F+++ + L+ +TA+ +AEIVR  + A+PRGQ+EAAI++GL
Sbjct: 530 IDAPGSWDIAEGTGFEITPFFLAMMLGLTLFTASTVAEIVRGSIQALPRGQVEAAISVGL 589

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RLV++PQA+RS++P L +Q++N+ KNSSLAV V ++D+  V   ++N  G+ I 
Sbjct: 590 NPYQRLRLVIMPQALRSMVPLLNNQFMNVWKNSSLAVIVAYSDIFYVVLVMMNNVGKLIP 649

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           + L+ +  Y + S+ I++ MN  N+++
Sbjct: 650 LFLLLLITYQAGSLAISVVMNWYNSRV 676



 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 2/145 (1%)

Query: 54  KSNLSLGIGFLSERAGFEIDQGIVPYTSDSSYATAIL-VGFVNTFWLAFSGMIPATIIGT 112
           ++  ++   F+ +   F+I+   +   ++S      L    +N+  +    ++   I+GT
Sbjct: 243 QNRWAVNFDFMDKVNTFKINPWPMEVVANSDARWLFLKAAIINSVRVTLLSIVLCVILGT 302

Query: 113 LVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFG-MFL 171
           +VG  RLS+NKL + +  VYVEVFRN+P  V++F +        P+      L  G +F 
Sbjct: 303 IVGVTRLSSNKLASTMATVYVEVFRNLPLAVLLFLISTQFGLQAPLFIEETFLFGGAVFY 362

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVL 196
           +N+G+ F T+       + + +  L
Sbjct: 363 SNQGIWFVTVGSYPVLVMGLVALAL 387


>gi|33863166|ref|NP_894726.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9313]
 gi|33635083|emb|CAE21069.1| ABC transporter for amino acids, membrane component
           [Prochlorococcus marinus str. MIT 9313]
          Length = 327

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 18/223 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
                 TLT+   A     +  LGI+L+L      R       +    +YI         
Sbjct: 111 HAWGGLTLTLLLTACSGALALPLGILLAL-----GRQTRLAVIQRSCSVYIDVMRAVP-- 163

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
              LIA+ +      P+     F+         +   +A + + AA+IAE VR GL A+P
Sbjct: 164 ---LIAVLFFGQLLIPL-----FLPMHLEVNRVLRAVLAFALFAAAYIAEDVRGGLQAIP 215

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           R Q EAA  LGL+ ++  +LV+LPQA+R+ +P LT+Q + LL+N+SL   +G  +L+ + 
Sbjct: 216 RTQREAAAVLGLSPKQIIQLVVLPQALRTALPALTNQAVGLLQNTSLMAILGLVELLGIS 275

Query: 354 GTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +++      G+ +E+ +    +Y  +   +AL    L  +++
Sbjct: 276 RSLLANPDFIGRYLEVYVWLAGVYWLVCTAMALLARHLEHQLS 318


>gi|221067527|ref|ZP_03543632.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
 gi|220712550|gb|EED67918.1| polar amino acid ABC transporter, inner membrane subunit [Comamonas
           testosteroni KF-1]
          Length = 266

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 111/264 (42%), Gaps = 2/264 (0%)

Query: 128 ICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           + R   E+    P L           +   +     V+    F +   L  P       A
Sbjct: 1   MSRSLEEILFAAPGLRARAVTKAVSAAAAALLLLLAVVIVWQFHSAGQLEAPYWEFFAWA 60

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
             + F    G++ +L ++ ++       G  L L  +S   +   P++ +I         
Sbjct: 61  TTWSF-LAKGLLGTLASSAMAAVISLALGLVLLLGRLSRLRLLRWPSIAVIEFLRGTPTL 119

Query: 248 KPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             +   F  +    +    +  L + +   TAA +AE+ R+G++AVPRGQ +AA +LGLT
Sbjct: 120 LLIYVCFLVLPSVGIKLSTYWMLTLPIGLSTAAVVAEVYRAGVLAVPRGQTDAARSLGLT 179

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++ PQA+R IIP L +Q + ++K+++    V + +L+     +I      + +
Sbjct: 180 EAQVFFFIVFPQALRYIIPALVAQLVIVVKDTTFGYVVTYGELMQSAKVLIANYHSLVPV 239

Query: 367 ILIWMFIYLSLSIMIALFMNRLNA 390
            LI   +Y  ++  I+    RL  
Sbjct: 240 YLIVAALYCLVNYGISKASQRLGR 263


>gi|150376015|ref|YP_001312611.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150030562|gb|ABR62678.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 217

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 14/228 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L    L+F          +   +   G +L +    +           L LL   
Sbjct: 1   MFNTALTWNDLAFLAQGAGMTLAVTAVAVTAGTLLGILFGVIRFQLGPYWAAPLTLL--- 57

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +   +P L+ + L         +               F +  + LS YTAAF AEIV
Sbjct: 58  LDVFRSVPLLIQLVLGSAFQSIVKLGWG-----------AFTTSGVVLSLYTAAFCAEIV 106

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G+ +VP     AA +LG+T  +  R ++ P A R  +P      L ++K+S+L + +G
Sbjct: 107 RGGISSVPVTTRRAARSLGMTWWQDMRYIVAPLATRVSLPSWIGLTLGVMKDSALVLWLG 166

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L+     ++ +  + + I+LI   IY  LS  +A F   L  + +
Sbjct: 167 LVELLRASQILVTRLQEPLFILLICGAIYFLLSFPVARFGGYLEKRWS 214


>gi|331695544|ref|YP_004331783.1| ectoine/hydroxyectoine ABC transporter permease EhuD
           [Pseudonocardia dioxanivorans CB1190]
 gi|326950233|gb|AEA23930.1| ectoine/hydroxyectoine ABC transporter, permease protein EhuD
           [Pseudonocardia dioxanivorans CB1190]
          Length = 218

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 19/221 (8%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F   +    L+   +T+       + +F LG+VL++           +  + +   
Sbjct: 5   WDWNFAGEIIPALLNGLRVTLIATVLGSIIAFALGLVLAVLG------RGPRPVRIVVRA 58

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            +    +   P LV +   Y L F  P            V        +AL  + A + +
Sbjct: 59  IVEF--VRSTPLLVQV---YFLFFVLPAF--------GVVLSALTVGILALGVHYATYTS 105

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+G+ AVPRGQ EAA AL L   +    V+LPQA+  ++P L +  +++ K + L +
Sbjct: 106 EVYRAGIDAVPRGQWEAATALSLPTTRVWTGVVLPQAIPRVLPALGNYVISMFKETPLLI 165

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIAL 383
            +G  D+V     +  Q+ + +E   +   ++L LS   ++
Sbjct: 166 GIGVLDIVGQAREVGGQSFRYVEAYTLAGLLFLLLSYPASM 206



 Score = 38.0 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +  +        A+L G   T      G I A  +G ++        + V  + R  VE 
Sbjct: 4   LWDWNFAGEIIPALLNGLRVTLIATVLGSIIAFALGLVLAVLGR-GPRPVRIVVRAIVEF 62

Query: 136 FRNIPPLVVIFFLYKSVLSV 155
            R+ P LV ++FL+  + + 
Sbjct: 63  VRSTPLLVQVYFLFFVLPAF 82


>gi|15596455|ref|NP_249949.1| permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|107100707|ref|ZP_01364625.1| hypothetical protein PaerPA_01001734 [Pseudomonas aeruginosa PACS2]
 gi|116049210|ref|YP_791987.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254234385|ref|ZP_04927708.1| hypothetical protein PACG_00228 [Pseudomonas aeruginosa C3719]
 gi|9947190|gb|AAG04647.1|AE004555_7 probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
 gi|115584431|gb|ABJ10446.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126166316|gb|EAZ51827.1| hypothetical protein PACG_00228 [Pseudomonas aeruginosa C3719]
          Length = 221

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F        L           ++   S + GI+++L     +R    +  +A   
Sbjct: 1   MFDYTFHWRSAFNALPEMLAGSLVTLQVTALSMLFGILIALLL-AFARLGGNRPLRAAAG 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +IS  +    P L  I + Y           F           + +L   ++   A ++
Sbjct: 60  AWIS--IARNTPALFQIYILY-----------FGLGSFGLHVSSWFALLAGVTFNNAGYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R GL AVP  Q+ AA +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL 
Sbjct: 107 AETFRGGLQAVPETQLRAARSLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLG 166

Query: 342 VAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V VG   DL  V   +  +T +  E   +   +Y +++ ++ L    L  ++
Sbjct: 167 VVVGLTDDLTGVTQALNVKTFRTFEYFALAAVLYFAMAKLLVLAARLLGWRL 218



 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 38/99 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    M+   +I  L+   RL  N+ +      ++ + RN P L  I+ L
Sbjct: 18  MLAGSLVTLQVTALSMLFGILIALLLAFARLGGNRPLRAAAGAWISIARNTPALFQIYIL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  + S          L  G+  NN G    T      A
Sbjct: 78  YFGLGSFGLHVSSWFALLAGVTFNNAGYLAETFRGGLQA 116


>gi|218507648|ref|ZP_03505526.1| octopine ABC transporter, permease protein [Rhizobium etli Brasil
           5]
          Length = 152

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 4/150 (2%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           Q+      LGQF  I  S + P      +   ++L+  TA + AEI R G+ AV   ++E
Sbjct: 3   QMFLVFYGLGQFGVIRYSFLWPFLREPMVCAVLSLALCTAGYTAEIFRGGIRAVSPKEIE 62

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ++G++     R +L P A R  +P  +++ + ++K+++LA  V   ++  V   +I+
Sbjct: 63  AARSIGMSGFLMVRRILAPIAFRHALPAYSTEIVLMMKSTALASLVTVWEVTGVAQRLIS 122

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           QT + +E+ L    IYL L+ +I   M  L
Sbjct: 123 QTYRTMEVFLCAAIIYLVLNFIILQGMALL 152


>gi|307320130|ref|ZP_07599550.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306894176|gb|EFN24942.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
          Length = 274

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 15/257 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIV-- 199
           +V++      V++V        +  +   L +  L    +   T    F+ +  LG+   
Sbjct: 28  IVLMLLFAALVVAVAVFMRWDWLPRYLPRLGSGILVSLAMLFSTAILGFLLAVPLGLAQV 87

Query: 200 -LSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIG 258
               F    +R F     +  PLL     L +GL +L       +  F  P L +     
Sbjct: 88  TGPWFFKAPARIFCT-VIRGTPLLLQLWLLYYGLGSLFPQFPAIRQSFLWPYLRE----- 141

Query: 259 GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQ 318
                  +     AL+   AA+  E++R     VP G++EAA A G+      R + LP+
Sbjct: 142 ------AWPYGVAALTVSFAAYEGEVMRGAFAGVPSGELEAARAYGMGRWTMFRRIWLPR 195

Query: 319 AMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           A+   +P L  + +  LK++ L   +   D+ +V   +  +T    E +L+   IY+ L+
Sbjct: 196 AIHRALPTLNGETVLQLKSTPLVATITVVDVYAVISKVRQETYLTYEPLLLLAAIYMCLT 255

Query: 379 IMIALFMNRLNAKIALK 395
            ++ +       +I  +
Sbjct: 256 AILVVAFRYFENRIPTR 272


>gi|91779034|ref|YP_554242.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91691694|gb|ABE34892.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 214

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 85/227 (37%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N       T        + V S VLG+ L L    L R         + + Y+S     
Sbjct: 1   MNAFDYWSITQGALATVVLSVSSIVLGVPLGLGL-ALIRWARVPFLNRVVIAYVSLIRSC 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
              TL L+       F   +                 +  +AL+  TAAF  EI R+ L+
Sbjct: 60  PAVTLTLLIFFALPQFGISL-------------DPTPAAILALTISTAAFNCEIWRAALM 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR Q +AA+A  +      R + LPQ  R+ +P L ++    +K++     +G  ++ 
Sbjct: 107 NFPRDQYDAALAFAMPRALRFRRIALPQIWRASLPGLVNEMTLQIKSTPAVAVIGIVEIT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +  +T   +   +  + +Y  +  ++      +  +  ++ +
Sbjct: 167 RAALRVGARTYDPLPPFIFALVLYGLIVFVLIRAQRMIERRQPVEAR 213



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 35/101 (34%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             +I  G + T  L+ S ++    +G  +   R +    +  +   YV + R+ P + + 
Sbjct: 6   YWSITQGALATVVLSVSSIVLGVPLGLGLALIRWARVPFLNRVVIAYVSLIRSCPAVTLT 65

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
             ++ ++       D +      + ++    +         
Sbjct: 66  LLIFFALPQFGISLDPTPAAILALTISTAAFNCEIWRAALM 106


>gi|167748156|ref|ZP_02420283.1| hypothetical protein ANACAC_02900 [Anaerostipes caccae DSM 14662]
 gi|317472312|ref|ZP_07931640.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes
           sp. 3_2_56FAA]
 gi|167652148|gb|EDR96277.1| hypothetical protein ANACAC_02900 [Anaerostipes caccae DSM 14662]
 gi|316900269|gb|EFV22255.1| His/Glu/Gln/Arg/opine family amino ABC transporter [Anaerostipes
           sp. 3_2_56FAA]
          Length = 225

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 22/210 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               V S + G++  +              KA+  LY+    I  +P LV + L Y    
Sbjct: 30  LVAVVLSLIFGVIFGIIM-----TSKNLIVKAVCRLYLEAIRI--IPILVWLFLFYF--- 79

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                       G  +  EF+S+ +  + +  A + +IVR  + ++PR Q E+ ++LGLT
Sbjct: 80  ------GLTRAMGIHLEGEFISIVV-FTMWGTAEMGDIVRGAVTSMPRHQTESGLSLGLT 132

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII-----NQTG 361
             +  R +L+PQ +R ++P   +    ++K +SL V +G  +++ VG  II     N   
Sbjct: 133 KLQIYRYILVPQTVRRVLPGAINLATRMVKTTSLVVIIGVVEVLKVGQQIIEGGILNTPA 192

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             + +     F+Y  L   I++   RL AK
Sbjct: 193 APLWVYGFIFFLYFILCYPISIVAKRLEAK 222



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +A   ++ + I G + G    S N +V  +CR+Y+E  R IP LV +F  
Sbjct: 18  LMSGLAVTIKIALVAVVLSLIFGVIFGIIMTSKNLIVKAVCRLYLEAIRIIPILVWLFLF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +   + I      +   +F   
Sbjct: 78  YFGLTRAMGIHLEGEFISIVVFTMW 102


>gi|296158680|ref|ZP_06841510.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295891248|gb|EFG71036.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 224

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 15/224 (6%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           R L +         +I   SF LG ++ L       H    T +A+ L      ++   P
Sbjct: 12  RQLPYLATGAVLTLEIAFVSFWLGCLIGLAGALGKLHGGALTRRAIGL---YVVVLTNTP 68

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LV I   +                         ++ I L+  + A++ +I+RSG+ +V 
Sbjct: 69  ALVQIFFLFY-----------ALPDAGITLSPMAAVLIGLTLNSGAYLTDILRSGISSVR 117

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
             ++E A  LG++  +  R V+LP   ++I  PL + ++ L+  SS+    G  +L    
Sbjct: 118 TSELETAETLGMSRLQTVRYVILPHVAKTIYAPLCNFFIWLVLGSSIGSIFGVEELTGRA 177

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             I +   + IE   +   +Y++L+ + ++ +  L  + A + K
Sbjct: 178 INISSANMRTIETFSVVAAMYVALTFVASIAL-ALTGRYAFRVK 220



 Score = 36.8 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 34/85 (40%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            +  G V T  +AF       +IG     G+L    L      +YV V  N P LV IFF
Sbjct: 16  YLATGAVLTLEIAFVSFWLGCLIGLAGALGKLHGGALTRRAIGLYVVVLTNTPALVQIFF 75

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLN 172
           L+ ++            +  G+ LN
Sbjct: 76  LFYALPDAGITLSPMAAVLIGLTLN 100


>gi|121610315|ref|YP_998122.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554955|gb|ABM59104.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 217

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 18/221 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +S   L++       V S + G+VL +   +         G    LL     ++   P L
Sbjct: 15  ISGFFLSIRLTIIAGVASLLGGLVLGIARIK-------ARGYVRFLLTAYVEVMRNTPLL 67

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + L Y   F  P+L            P F  + + L      F++E++R G ++V   
Sbjct: 68  VTLYLVY---FGLPML--------GIDIPTFPCVVVVLVMQHTVFVSEVLRGGFLSVSIS 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+EA  ALG+      R+V  PQA  + +P L +  + L+ ++SL  AV   DL      
Sbjct: 117 QIEAGRALGMRPLAIFRIVQFPQAWSASVPALINALIILVHDTSLGAAVSLGDLTMAANV 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I  +T  + E  L     Y +LS  ++   + L  +  +  
Sbjct: 177 ISQRTASSFEPFLAIAVCYSALSWSLSRAGSFLERRSKIAR 217



 Score = 42.2 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 39/90 (43%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A++ GF  +  L     + + + G ++G  R+ A   V ++   YVEV RN P LV ++
Sbjct: 12  DALISGFFLSIRLTIIAGVASLLGGLVLGIARIKARGYVRFLLTAYVEVMRNTPLLVTLY 71

Query: 147 FLYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
            +Y  +  +         +   + + +   
Sbjct: 72  LVYFGLPMLGIDIPTFPCVVVVLVMQHTVF 101


>gi|183602355|ref|ZP_02963721.1| permease of ABC transporter system for amino acids [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219683330|ref|YP_002469713.1| permease of ABC transporter system for amino acids [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241191291|ref|YP_002968685.1| amino acid ABC transporter permease [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241196697|ref|YP_002970252.1| amino acid ABC transporter permease [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|183218274|gb|EDT88919.1| permease of ABC transporter system for amino acids [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219620980|gb|ACL29137.1| permease of ABC transporter system for amino acids [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240249683|gb|ACS46623.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240251251|gb|ACS48190.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|295794284|gb|ADG33819.1| ABC-type amino acid transport system permease component
           [Bifidobacterium animalis subsp. lactis V9]
          Length = 224

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 18/215 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   S  L I L L    L       T +   + ++    +  +  +  +AL + 
Sbjct: 21  WVTIWIAAVSVGLSIPLGLLCGWLM------TLRNPVIRFVMRVYLDFIRIMPQLALLFI 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +    +  +N            S       +  A + ++VR  L ++P+ Q E +  L
Sbjct: 75  AFYGIARMSNWN-------MDATASCVFVFVLWGGAELGDLVRGALQSIPQIQYETSYML 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL++ +A   V+LPQA+R ++P   +    ++K +SLAV +G  +++ VG  II+     
Sbjct: 128 GLSNWQAFVHVILPQAVRRLLPGAVNLSTRIVKTTSLAVLLGVVEVIKVGQQIIDANRFQ 187

Query: 364 IE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  +  +   +Y  +   ++L  + L  + A
Sbjct: 188 YPTGTLWVYGVIFLMYFIVCWPLSLVAHALEKRWA 222



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T W+A   +  +  +G L G      N ++ ++ RVY++  R +P L ++F  
Sbjct: 16  LLQGLWVTIWIAAVSVGLSIPLGLLCGWLMTLRNPVIRFVMRVYLDFIRIMPQLALLFIA 75

Query: 149 YKSVLSVLPI 158
           +  +  +   
Sbjct: 76  FYGIARMSNW 85


>gi|88855456|ref|ZP_01130120.1| putative glutamate transporter permease [marine actinobacterium
           PHSC20C1]
 gi|88815363|gb|EAR25221.1| putative glutamate transporter permease [marine actinobacterium
           PHSC20C1]
          Length = 222

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 19/203 (9%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           + +FVLGI+++       R       +    +Y        L  LVL    Y L      
Sbjct: 34  LGAFVLGILIATM-----RISPVPALRLFATVYTEILRNIPL-LLVLFFCAYVLPIL--- 84

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                          F+   + L+ YT+ F+AE VRSG   VP GQ EAA ++G+   + 
Sbjct: 85  ---------GVDLDFFLLAALGLTLYTSPFVAEAVRSGFNGVPVGQAEAARSIGMGFTQT 135

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
             L++LPQA R ++PPL + ++ L KN+S+A      +L           G  + + L++
Sbjct: 136 VGLIILPQAGRMVVPPLINVFIALTKNTSVAGIFFVNELFKATYAAARDNGDVVVLTLVY 195

Query: 371 MF-IYLSLSIMIALFMNRLNAKI 392
              +YL++++ + L    +  K+
Sbjct: 196 AVALYLAITVPLGLIAGAIEKKV 218



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF+ T  L     + A ++G L+   R+S    +     VY E+ RNIP L+V+FF    
Sbjct: 21  GFLLTLALLGISGLGAFVLGILIATMRISPVPALRLFATVYTEILRNIPLLLVLFFCAYV 80

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGL 176
           +  +    D  ++   G+ L     
Sbjct: 81  LPILGVDLDFFLLAALGLTLYTSPF 105


>gi|126740696|ref|ZP_01756382.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
 gi|126718211|gb|EBA14927.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. SK209-2-6]
          Length = 268

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 13/209 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            + + G VL+  A  L+++      +     +I  FL  G P  +     Y L      +
Sbjct: 49  LAVLGGFVLAN-AIALAKNSPRAALRKPAEWFI--FLFRGSPLFIQFFFAYFLFLQLKQV 105

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                   +  S  ++   I L   TAA+ AEI    L ++P+G +EAA A GLT     
Sbjct: 106 SPVF----NAFSSAWLGALIVLFLNTAAYSAEIFYGALRSIPKGDIEAADAYGLTGWSRF 161

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAIE 365
           R ++ P  MR   P  T++ + L   ++L    GF       D +       ++T     
Sbjct: 162 RRIMWPTMMRLAWPSYTNEAIFLFHATTLVFFSGFPTWRQQGDALYYARYFADKTFNPFI 221

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              I  F ++ L+++I      +N ++  
Sbjct: 222 PYPILAFYFILLTLVIIAIFGVVNKRLNR 250


>gi|52144757|ref|YP_082071.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
 gi|51978226|gb|AAU19776.1| amino acid ABC transporter, permease [Bacillus cereus E33L]
          Length = 221

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 8/155 (5%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           L+   + L+F  P L              F    +A+      ++ E++RSGL ++ + Q
Sbjct: 67  LLIQLFFLYFGLPSL--------GIKLSNFSIALLAMCFLGGGYMTEVIRSGLNSISKSQ 118

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +E+  A+GL   +  R ++LPQA     P L + ++ LLK +S+  A+   +L+     +
Sbjct: 119 VESGYAIGLNKWQLFRFIILPQAATISAPALFANFIFLLKETSIVSAIAVPELLYTTTNL 178

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I+   +  E++++    Y+ L + ++  ++ L  +
Sbjct: 179 ISIYYKTSEMLIMLTASYIFLFVPLSFLLSWLERR 213


>gi|298290177|ref|YP_003692116.1| polar amino acid ABC transporter inner membrane subunit [Starkeya
           novella DSM 506]
 gi|296926688|gb|ADH87497.1| polar amino acid ABC transporter, inner membrane subunit [Starkeya
           novella DSM 506]
          Length = 221

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 18/219 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T+   A   +   +LG++  +         +   G  L +          +
Sbjct: 16  WFMLKGAGVTLALTAWAVLGGTLLGVLFGVIRAISPWWINAPIGAVLDV-------FRSV 68

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + L             F  I G   +P F    + L+ Y +A+  EIVRSG +AV
Sbjct: 69  PLLIQLVLA----------NSFKTIVGINWAP-FTVSCVVLALYMSAYCTEIVRSGFLAV 117

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P     AA +LG+T R+    ++ P A+R  +P      L ++K++++   +G  +L+  
Sbjct: 118 PSTTRRAARSLGMTWRQDLTDIVFPIALRVALPSWIGLTLGVMKDTAMVWWIGVVELLRS 177

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              I+ +  + + ++ I   IY  +S  IA    RL A+
Sbjct: 178 SQVIVTRIQEPLFVLSIAGLIYFLMSFPIARLGARLEAR 216



 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G   T  L    ++  T++G L G  R  +   +       ++VFR++P L+ +
Sbjct: 15  LWFMLKGAGVTLALTAWAVLGGTLLGVLFGVIRAISPWWINAPIGAVLDVFRSVPLLIQL 74

Query: 146 FFLYK 150
                
Sbjct: 75  VLANS 79


>gi|326789991|ref|YP_004307812.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326540755|gb|ADZ82614.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 225

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 95/214 (44%), Gaps = 22/214 (10%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M       + S VLGIVL +           K  K +  +Y+    I  +P LV + + Y
Sbjct: 26  MKVALIAMILSGVLGIVLGILM-----TSKHKAVKVICRIYLEAIRI--IPILVWLFIFY 78

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                         + G  +  E +S  I  + +  A + +IVR  + ++P+ Q ++  A
Sbjct: 79  F---------GLTKLIGYHIEAEIIS-IIVFTLWGTAEMGDIVRGAITSMPKAQSDSGRA 128

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-- 360
           +GL+  +  R +++PQA+R ++P   +    ++K +SL V +G  +++ VG  II  +  
Sbjct: 129 IGLSEIQIYRYIIIPQAIRRMLPTAINLATRMVKTTSLIVLIGVVEVLKVGQQIIEASIL 188

Query: 361 ---GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 + +      +Y  +   I++F  +L  K
Sbjct: 189 KVPSAPLWVYGFIFILYFIICYPISIFSKKLEMK 222



 Score = 43.0 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G      +A   MI + ++G ++G    S +K V  ICR+Y+E  R IP LV +F  
Sbjct: 18  LIGGLGVAMKVALIAMILSGVLGIVLGILMTSKHKAVKVICRIYLEAIRIIPILVWLFIF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +  ++     + ++   +F   
Sbjct: 78  YFGLTKLIGYHIEAEIISIIVFTLW 102


>gi|218892768|ref|YP_002441637.1| putative permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
 gi|218772996|emb|CAW28808.1| probable permease of ABC transporter [Pseudomonas aeruginosa
           LESB58]
          Length = 221

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 15/209 (7%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   S + GI+++L     +R    +  +A    +IS  +    P L  I + Y  
Sbjct: 24  VTLQVTALSMLFGILIALLL-AFARLGGHRPLRAAAGAWIS--IARNTPALFQIYILY-- 78

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F           + +L   ++   A ++AE  R GL AVP  Q+ AA +LG
Sbjct: 79  ---------FGLGSFGLHVSSWFALLAGVTFNNAGYLAETFRGGLQAVPETQLRAARSLG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA-DLVSVGGTIINQTGQA 363
           ++  +A RLV++PQ +R +  PLT+Q +  +  +SL V VG   DL  V   +  +T + 
Sbjct: 130 MSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLGVVVGLTDDLTGVTQALNVKTFRT 189

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E   +   +Y +++ ++ L    L  ++
Sbjct: 190 FEYFALAAVLYFAMAKLLVLAARLLGWRL 218



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 38/99 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    M+   +I  L+   RL  ++ +      ++ + RN P L  I+ L
Sbjct: 18  MLAGSLVTLQVTALSMLFGILIALLLAFARLGGHRPLRAAAGAWISIARNTPALFQIYIL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  + S          L  G+  NN G    T      A
Sbjct: 78  YFGLGSFGLHVSSWFALLAGVTFNNAGYLAETFRGGLQA 116


>gi|121610314|ref|YP_998121.1| polar amino acid ABC transporter inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
 gi|121554954|gb|ABM59103.1| polar amino acid ABC transporter, inner membrane subunit
           [Verminephrobacter eiseniae EF01-2]
          Length = 218

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 89/211 (42%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + S  +  VL      +S            + +++  LI G+  + L+   +  ++
Sbjct: 21  LLFSLISMCIAFVLGFLLAEVS------ILGGRVIAFVTRCLIEGVRGVPLLVFVFLTYY 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L                S  IAL+ + + ++AEI R     +P+ Q EA +ALG++
Sbjct: 75  SLPKL--------GIRLDAMYSGCIALAVFFSMYVAEIFRGAFRTIPKVQTEAGMALGMS 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
           H K   +VLLPQA+R  +P L +    ++K +S+   +G  +L      ++ +T      
Sbjct: 127 HWKIQIIVLLPQALRIALPSLMNIAAIVIKATSVMSIIGVWELTLATNELVMRTLAPFTF 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +  + +Y  L   +      L+ ++   ++
Sbjct: 187 FVAALVLYFVLCYSMVRSATYLSNRLNKSQR 217


>gi|238765044|ref|ZP_04625980.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
 gi|238696730|gb|EEP89511.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia kristensenii ATCC 33638]
          Length = 227

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 13/207 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A   +    LG+V +      +    +   + +   Y+   ++   P +V +   + +
Sbjct: 27  LTAMATIGGIALGVVGAAIRCSHNPRLDKVILRRVWGGYVE--IVRNTPFVVQL---FFI 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P LG     G         +  +A++    A+  EI+R+G+ A  +GQ EA   LG
Sbjct: 82  VFGLPALGLKLSAGQ--------AAVLAMTINLGAYSTEIIRAGIQASAKGQWEAGRVLG 133

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +    V+LP +++ I P L SQ + ++  S++   V F +L      I ++T  + 
Sbjct: 134 LSRSQVFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSFEELTFAANLIQSRTFLSF 193

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           E+ L+   +YL LSI++   +     +
Sbjct: 194 EVYLVTTLLYLLLSIVMRQLLLAAGRR 220



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 5/118 (4%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANK-----LVAWICRV 131
           + +++   Y   +L G + T  L     I    +G +  A R S N      ++  +   
Sbjct: 5   LNFSALWPYLPELLSGLLVTIELTAMATIGGIALGVVGAAIRCSHNPRLDKVILRRVWGG 64

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           YVE+ RN P +V +FF+   + ++             M +N    S   +     A  
Sbjct: 65  YVEIVRNTPFVVQLFFIVFGLPALGLKLSAGQAAVLAMTINLGAYSTEIIRAGIQASA 122


>gi|325062523|gb|ADY66213.1| ABC transporter, membrane spanning protein [Agrobacterium sp.
           H13-3]
          Length = 223

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/121 (29%), Positives = 66/121 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A+     A+  EI+R+G+ A P+GQ EA  +L +T  +  R V+L  +++ I 
Sbjct: 89  ELTAANLAMIVNLGAYSCEIIRAGIQATPKGQFEAGASLAMTRFETFRHVVLTPSLQRIW 148

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P L+SQ + ++  S++   +   DL      I ++T +A E  ++   IYL L+I++   
Sbjct: 149 PALSSQVVIVMLGSAVVSQIAVEDLTFAANFIQSRTFRAFEAYILSTVIYLLLAILLRQG 208

Query: 385 M 385
           M
Sbjct: 209 M 209


>gi|209528047|ref|ZP_03276527.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
 gi|209491533|gb|EDZ91908.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrospira maxima CS-328]
          Length = 113

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/105 (55%), Positives = 80/105 (76%)

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA +LGL      RLV+ PQA+R IIPPL SQYLNL KNSSLA+AV +ADL +V
Sbjct: 9   SQGQWEAARSLGLKSGLVMRLVVFPQALRVIIPPLNSQYLNLAKNSSLAIAVAYADLYNV 68

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             T  NQ+G+A+E++LI M  YL+++++I+LFMN LN ++ L+E+
Sbjct: 69  ANTTFNQSGRAVEVMLIIMAAYLTINLIISLFMNFLNRRVQLQER 113


>gi|300868856|ref|ZP_07113462.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC
           6506]
 gi|300333073|emb|CBN58654.1| putative ABC transporter, permease protein [Oscillatoria sp. PCC
           6506]
          Length = 224

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 88/220 (40%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
                F    +    ++ + S   G+VL      + R         + + Y+    +   
Sbjct: 11  WNNAGFLIQGVFLTFQLAIVSIAGGLVLGTIG-AMGRTSGNAVFNGIAVAYVEF--LRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +               F           + +  +AL+    A+  EI+R+G+ ++
Sbjct: 68  PFLIQLFFF-----------FFGLPSLGIKLTSWQAAVLALAINFGAYSTEIIRAGIESI 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ+EA +ALG    +  R ++L  A+ ++ P L SQ +  +  +S+   +   +L  V
Sbjct: 117 RKGQIEAGLALGFKKLQIFRHIILIPALGNVYPSLVSQIVIAILFTSVVSQISAEELTFV 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  + ++T ++ EI L    IY+ +   I      +  K 
Sbjct: 177 GNYLQSRTFRSFEIYLTITLIYVGIIWAIKAIAFLIQKKF 216



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 41/96 (42%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++   + A  ++ G   TF LA   +    ++GT+   GR S N +   I   YVE  R
Sbjct: 6   EFSVVWNNAGFLIQGVFLTFQLAIVSIAGGLVLGTIGAMGRTSGNAVFNGIAVAYVEFLR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           N P L+ +FF +  + S+             + +N 
Sbjct: 66  NTPFLIQLFFFFFGLPSLGIKLTSWQAAVLALAINF 101


>gi|209546610|ref|YP_002278528.1| polar amino acid ABC transporter inner membrane protein [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537854|gb|ACI57788.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 241

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 77/174 (44%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T +I  +P L+LI   Y    D                  F++    L     A++ E+
Sbjct: 66  YTTVIRAVPELILIVGLYYAGTDGLNRLLAALELPPVNVNGFVAAVAVLGFVQGAYMTEV 125

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R  ++A+P GQ+EAA A G+      R VLLP  + + +P L + ++++ K+S+L   V
Sbjct: 126 LRGAILAIPVGQIEAAKAFGMGPMLRFRRVLLPALLPNALPGLANLWMSVTKDSALVAVV 185

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           G+ +L          T       L    +YL+++++  +    +  ++   + +
Sbjct: 186 GYQELALATRLAGASTKHYFVFFLASALLYLAITLVSNVAFKLIEGRVRRGQPR 239


>gi|312961853|ref|ZP_07776351.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
 gi|311284112|gb|EFQ62695.1| amino acid ABC transporter, permease protein [Pseudomonas
           fluorescens WH6]
          Length = 272

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 4/169 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               +F+ S VLG  LS+    L+R       +    +Y  T+L  G P  + + + Y  
Sbjct: 25  MTLWLFIISVVLGFFLSIPL-ALARVSAHFWLRWPVEMY--TYLFRGTPLYIQLLICYTG 81

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +   V+ Q N +             +A    T A+  EI    +  +P G++EAA A G
Sbjct: 82  LYSLEVV-QDNALLNQFFRNALNCTLLAFVLNTCAYTVEIFAGAIRNIPHGEIEAARAYG 140

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
           L   +    V++P A+R  +P  +++ + +L  +SLA     AD++ V 
Sbjct: 141 LHGWRLNLFVVVPAALRRALPAYSNEMILMLHATSLAFTATVADILKVA 189



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 36/81 (44%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L G   T WL    ++    +   +   R+SA+  + W   +Y  +FR  P  + +  
Sbjct: 18  AGLSGVAMTLWLFIISVVLGFFLSIPLALARVSAHFWLRWPVEMYTYLFRGTPLYIQLLI 77

Query: 148 LYKSVLSVLPIPDHSIVLPFG 168
            Y  + S+  + D++++  F 
Sbjct: 78  CYTGLYSLEVVQDNALLNQFF 98


>gi|307253360|ref|ZP_07535231.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859039|gb|EFM91081.1| Amino acid ABC transporter, permease protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 222

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 94/232 (40%), Gaps = 18/232 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      +  +     +   A+I   S  L +V       L R  +    +A+   Y+
Sbjct: 1   MGFDWLFEGQNAARLAQGLWLTAQISFISVGLSLVFGTLFGLLMRANNVLV-RAVCRFYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
            T  I       ++   + ++F        +  G       F       + +  A + ++
Sbjct: 60  ETIRIVP-----ILVWLFAIYFGLSTWFNLHISG-------FWVCIWVFTLWGIAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L+++ + Q+E+A ALGL   +  + + LPQ  R ++P   + +  ++K SSLA  +
Sbjct: 108 VRGTLVSIEKHQIESARALGLNRWQIFQHIELPQGTRRVLPRAINLFTRMVKTSSLAALI 167

Query: 345 GFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           G  ++V VG  II          +  +  +   +Y  +   ++LF  RL  K
Sbjct: 168 GVIEIVKVGQQIIENALLTNPSASFFVYGLIFILYFLICYPLSLFATRLEHK 219



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 41/101 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T  ++F  +  + + GTL G    + N LV  +CR Y+E  R +P LV +F +
Sbjct: 15  LAQGLWLTAQISFISVGLSLVFGTLFGLLMRANNVLVRAVCRFYLETIRIVPILVWLFAI 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  + +   +      +   +F          L   T   I
Sbjct: 75  YFGLSTWFNLHISGFWVCIWVFTLWGIAEMGDLVRGTLVSI 115


>gi|291518763|emb|CBK73984.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Butyrivibrio fibrisolvens 16/4]
          Length = 224

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 89/215 (41%), Gaps = 18/215 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             + +I + S VL I L L    L    + K   A   +Y+ T  I        + L + 
Sbjct: 23  WVSIEISLISVVLSIFLGLVVGVLM-TVNNKILHAFLKVYLETVRIMP-----QMVLLFI 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           ++F    +  ++    S       S     + +  A + ++VR  + ++P  Q E+A AL
Sbjct: 77  VYFGTTRVFGWDMSAES-------SAIFVFTFWGTAEMGDLVRGSIKSIPIIQFESAWAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           G+   +    ++LPQ +R +IP   +    ++K +SL + +G  +++ V   II      
Sbjct: 130 GMDKLQTYFYIILPQTVRRLIPLSINLITRMIKTTSLVMMIGIVEVLKVAQQIIEANRKT 189

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
               A  + L+   +Y  +   I+     L  + A
Sbjct: 190 SPNAAFGVFLVVFLLYFIVCWPISRLAAYLEKRWA 224



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 58/165 (35%), Gaps = 2/165 (1%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +      +    +L G   +  ++   ++ +  +G +VG      NK++    +VY+E  
Sbjct: 6   IDVLFKGTNFLRLLQGLWVSIEISLISVVLSIFLGLVVGVLMTVNNKILHAFLKVYLETV 65

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +P +V++F +Y     V      +      +F          L   +   I +  F  
Sbjct: 66  RIMPQMVLLFIVYFGTTRVFGWDMSAESSAIFVFTFWGTAEMGDLVRGSIKSIPIIQFES 125

Query: 197 GIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              L +    T       +   + +PL       +    +LV++ 
Sbjct: 126 AWALGMDKLQTYFYIILPQTVRRLIPLSINLITRMIKTTSLVMMI 170


>gi|239816641|ref|YP_002945551.1| polar amino acid ABC transporter inner membrane protein [Variovorax
           paradoxus S110]
 gi|239803218|gb|ACS20285.1| polar amino acid ABC transporter, inner membrane subunit
           [Variovorax paradoxus S110]
          Length = 218

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 99/223 (44%), Gaps = 14/223 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F               +     +   + V+G+ + + A   +R       + +   Y+
Sbjct: 1   MEFDFGAVLVDWRLLAKGIAWTVGLTAIATVIGMAVGV-ACAWARASGPAWLRWVVGSYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              LI   P +V +   +   F  P         G  ++PE ++  IA+     A+  EI
Sbjct: 60  E--LIRNTPFIVQLFFIF---FGLPA-------AGVKLTPE-VASIIAMVMNLGAYSTEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ A P+GQ+EAA++L L   +    V+LP A++ + P + SQ + ++  S++   +
Sbjct: 107 IRAGIEATPKGQIEAAVSLALDKVQVFTRVVLPPALKKVWPAMVSQIIIVMLGSAVCGQI 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
              +L      I ++  +A E  ++   +YL+L++ +   +N 
Sbjct: 167 STEELSYAANLIQSRNFRAFEAFIVATLLYLALAVALRRLLNW 209



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G   T  L     +    +G      R S    + W+   YVE+ RN P +V +
Sbjct: 12  WRLLAKGIAWTVGLTAIATVIGMAVGVACAWARASGPAWLRWVVGSYVELIRNTPFIVQL 71

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           FF++  + +        +     M +N
Sbjct: 72  FFIFFGLPAAGVKLTPEVASIIAMVMN 98


>gi|254239634|ref|ZP_04932956.1| hypothetical protein PA2G_00251 [Pseudomonas aeruginosa 2192]
 gi|126193012|gb|EAZ57075.1| hypothetical protein PA2G_00251 [Pseudomonas aeruginosa 2192]
          Length = 221

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F        L           ++   S + GI+++L     +R    +  +A   
Sbjct: 1   MFDYTFHWRSAFNALPEMLAGSLVTLQVTALSMLFGILIALLL-AFARLGSNRPLRAAAG 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +IS  +    P L  I + Y           F           + +L   ++   A ++
Sbjct: 60  AWIS--IARNTPALFQIYILY-----------FGLGSFGLHVSSWFALLAGVTFNNAGYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R GL AVP  Q+ AA +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL 
Sbjct: 107 AETFRGGLQAVPETQLRAARSLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLG 166

Query: 342 VAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V VG   DL  V   +  +T +  E   +   +Y +++ ++ L    L  ++
Sbjct: 167 VVVGLTDDLTGVTQALNVKTFRTFEYFALAAVLYFAMAKLLVLAARLLGWRL 218



 Score = 43.0 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 39/99 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    M+   +I  L+   RL +N+ +      ++ + RN P L  I+ L
Sbjct: 18  MLAGSLVTLQVTALSMLFGILIALLLAFARLGSNRPLRAAAGAWISIARNTPALFQIYIL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  + S          L  G+  NN G    T      A
Sbjct: 78  YFGLGSFGLHVSSWFALLAGVTFNNAGYLAETFRGGLQA 116


>gi|15964314|ref|NP_384667.1| putative transport system permease ABC transporter protein
           [Sinorhizobium meliloti 1021]
 gi|307307050|ref|ZP_07586789.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|15073491|emb|CAC45133.1| Putative transport system permease ABC transporter [Sinorhizobium
           meliloti 1021]
 gi|306901990|gb|EFN32589.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 274

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 93/231 (40%), Gaps = 9/231 (3%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
                R L      +  +  +   + +LG +L++    L++       KA   ++ +   
Sbjct: 47  WDWLPRYLPRLGSGILVSLAMLFSTAILGFLLAVPLG-LAQVTGPWFFKAPARIFCTVIR 105

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEI 284
              L       L    +    +  QF  I  S + P     +     AL+   AA+  E+
Sbjct: 106 GTPLLL----QLWLLYYGLGSLFPQFPAIRQSFLWPYLREAWPYGVAALTVSFAAYEGEV 161

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R     VP G++EAA A G+      R + LP+A+   +P L  + +  LK++ L   +
Sbjct: 162 MRGAFAGVPSGELEAARAYGMGRWTMFRRIWLPRAIHRALPTLNGETVLQLKSTPLVATI 221

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              D+ +V   +  +T    E +L+   IY+ L+ ++ +       +I  +
Sbjct: 222 TVVDVYAVISKVRQETYLTYEPLLLLAAIYMCLTAILVVAFRYFENRIPTR 272


>gi|325970436|ref|YP_004246627.1| polar amino acid ABC transporter inner membrane subunit
           [Spirochaeta sp. Buddy]
 gi|324025674|gb|ADY12433.1| polar amino acid ABC transporter, inner membrane subunit
           [Spirochaeta sp. Buddy]
          Length = 221

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 17/211 (8%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
           +T+         SFV G VL +     +R+  +     L  LYI +        L+L  L
Sbjct: 23  MTLFIALISICLSFVFGSVLGI-----ARYLGKGPAAKLAALYIDSVRNIP---LLLFIL 74

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            ++L      L     +G         S  +A++ +T+A +AEI+R GL  +P+GQ EAA
Sbjct: 75  SFRL------LLPSVILGIRIPDKAVFSGIVAMTVFTSAMVAEILRGGLNGIPKGQWEAA 128

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-- 358
            + G +  K  R ++ PQA+R I+ P+  Q++  LK++S    VG ++L+     I+   
Sbjct: 129 ASQGFSRYKTLRYIIFPQALRKILVPMLGQFVTCLKDTSFLQVVGISELMMNATIIMGKF 188

Query: 359 -QTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             + Q I +  +    Y   +  +     R+
Sbjct: 189 KYSYQVILLYTLVALAYYGANSAVLTIAKRI 219



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T ++A   +  + + G+++G  R       A +  +Y++  RNIP L+ I      
Sbjct: 20  GLGMTLFIALISICLSFVFGSVLGIARYLGKGPAAKLAALYIDSVRNIPLLLFILSFRLL 79

Query: 152 VLSVLPIPDHSIVLPFG 168
           + SV+          F 
Sbjct: 80  LPSVILGIRIPDKAVFS 96


>gi|296156701|ref|ZP_06839539.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
 gi|295893300|gb|EFG73080.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. Ch1-1]
          Length = 214

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 85/227 (37%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N       T        + V S VLG+ L L    L R         + + Y+S     
Sbjct: 1   MNAFDYWSITQGALATVVLSVSSIVLGVPLGLGL-ALIRWARVPFLNRVVIAYVSLIRSC 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
              TL L+       F   +                 +  +AL+  TAAF  EI R+ L+
Sbjct: 60  PAVTLTLLIFFALPQFGISL-------------DPTPAAILALTISTAAFNCEIWRAALM 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR Q +AA+A  +      R + LPQ  R+ +P L ++    +K++     +G  ++ 
Sbjct: 107 NFPRDQYDAALAFAMPRALRFRRIALPQIWRASLPGLVNEMTLQIKSTPAVAVIGIVEIT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +  +T   +   +  + +Y  +  ++      +  +  L+ +
Sbjct: 167 RAALRVGARTYDPLPPFIFALVLYGLIVFVLIRAQRIIERRQPLEAR 213



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 35/101 (34%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
             +I  G + T  L+ S ++    +G  +   R +    +  +   YV + R+ P + + 
Sbjct: 6   YWSITQGALATVVLSVSSIVLGVPLGLGLALIRWARVPFLNRVVIAYVSLIRSCPAVTLT 65

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTN 186
             ++ ++       D +      + ++    +         
Sbjct: 66  LLIFFALPQFGISLDPTPAAILALTISTAAFNCEIWRAALM 106


>gi|268681106|ref|ZP_06147968.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID332]
 gi|268621390|gb|EEZ53790.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID332]
          Length = 225

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             ++  F +  +  + ++   + 
Sbjct: 27  QISLISVAASCVLGTLFGLVLRSRNRLVR----------FVGRFYLETIRIVPILVWLFG 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       S +  A + ++VR  L ++ + Q+E+ +A 
Sbjct: 77  LYFGLSVWTGIHIGG-------FWVCVWVFSLWGVAEMGDLVRGALESIEKHQVESGLAP 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+  +  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 130 GLSRGQVFRCIELPQSIRRVLPGAVNLFTRMIKTSSLAWLIGVIEVVKVGQQIIENSLLT 189

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 190 QPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQK 222



 Score = 43.4 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV ++ R Y+E  R +P LV +F LY  
Sbjct: 21  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRFVGRFYLETIRIVPILVWLFGLYFG 80

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 81  LSVWTGIHIGGFWVCVWVFSLW 102


>gi|330501279|ref|YP_004378148.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas mendocina NK-01]
 gi|328915565|gb|AEB56396.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas mendocina NK-01]
          Length = 221

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 97/239 (40%), Gaps = 18/239 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +       +  ++  L     T+   A   +    LGIV ++      R F    G  
Sbjct: 1   MAYQFDFAAVLQHSDLLLQGAAFTLGLTAIGTLLGVGLGIVGAILRAWRIRPFDRIFG-- 58

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                +   LI   P +V +   +           F          E+ +  +A+     
Sbjct: 59  -----VYVELIRNTPFIVQLFFIF-----------FGLPSLGVRLSEWEAAILAMVINLG 102

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+  EI+R+G+ A+P GQ+EAA AL ++  +  R V+L  A+  + P L+SQ + ++  S
Sbjct: 103 AYSTEIIRAGIQAIPHGQLEAASALAMSRFETFRHVVLRPALGKVWPALSSQIIIVMLGS 162

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           ++   +   +L      I ++  +A E  L+   +YL ++I I   +  +  +  +  +
Sbjct: 163 AVCSQISTEELSFAANFIQSRNFRAFETYLLTTALYLLMAIGIRQLLAWVGRRFIMGAR 221



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + +   ++  +L G   T  L   G +    +G +    R    +    I  VYVE+ R
Sbjct: 6   DFAAVLQHSDLLLQGAAFTLGLTAIGTLLGVGLGIVGAILRAWRIRPFDRIFGVYVELIR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           N P +V +FF++  + S+             M +N    S   +     A 
Sbjct: 66  NTPFIVQLFFIFFGLPSLGVRLSEWEAAILAMVINLGAYSTEIIRAGIQAI 116


>gi|296390363|ref|ZP_06879838.1| putative permease of ABC transporter [Pseudomonas aeruginosa PAb1]
 gi|313106243|ref|ZP_07792492.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
 gi|310878994|gb|EFQ37588.1| putative permease of ABC transporter [Pseudomonas aeruginosa 39016]
          Length = 221

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F        L           ++   S + GI+++L     +R    +  +A   
Sbjct: 1   MFDYTFHWRSAFNALPEMLAGSLVTLQVTALSMLFGILIALLL-AFARLGGNRPLRAAAG 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +IS  +    P L  I + Y           F           + +L   ++   A ++
Sbjct: 60  AWIS--IARNTPALFQIYILY-----------FGLGSFGLHVSSWFALLAGVTFNNAGYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R GL AVP  Q+ AA +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL 
Sbjct: 107 AETFRGGLQAVPETQLRAARSLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLG 166

Query: 342 VAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V VG   DL  V   +  +T +  E   +   +Y +++ ++ L    L  ++
Sbjct: 167 VVVGLTNDLTGVTQALNVKTFRTFEYFALAAVLYFAMAKLLVLAARLLGWRL 218



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 38/99 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    M+   +I  L+   RL  N+ +      ++ + RN P L  I+ L
Sbjct: 18  MLAGSLVTLQVTALSMLFGILIALLLAFARLGGNRPLRAAAGAWISIARNTPALFQIYIL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  + S          L  G+  NN G    T      A
Sbjct: 78  YFGLGSFGLHVSSWFALLAGVTFNNAGYLAETFRGGLQA 116


>gi|254492737|ref|ZP_05105908.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268600325|ref|ZP_06134492.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID18]
 gi|268602557|ref|ZP_06136724.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID1]
 gi|268685586|ref|ZP_06152448.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-93-1035]
 gi|226511777|gb|EEH61122.1| amino acid ABC transporter [Neisseria gonorrhoeae 1291]
 gi|268584456|gb|EEZ49132.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID18]
 gi|268586688|gb|EEZ51364.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           PID1]
 gi|268625870|gb|EEZ58270.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 225

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             ++  F +  +  + ++   + 
Sbjct: 27  QISLISVAASCVLGTLFGLVLRSRNRLVR----------FVGRFYLETIRIVPILVWLFG 76

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       S +  A + ++VR  L ++ + Q+E+ +A 
Sbjct: 77  LYFGLSVWTGIHIGG-------FWVCVWVFSLWGVAEMGDLVRGALESIEKHQVESGLAP 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+  +  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 130 GLSRGQVFRCIELPQSIRRVLPGAVNLFTRMIKTSSLAWLIGVIEVVKVGQQIIENSLLT 189

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 190 QPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQK 222



 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV ++ R Y+E  R +P LV +F LY  
Sbjct: 21  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRFVGRFYLETIRIVPILVWLFGLYFG 80

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 81  LSVWTGIHIGGFWVCVWVFSLW 102


>gi|22536879|ref|NP_687730.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76786730|ref|YP_329463.1| polar amino acid ABC transporter permease [Streptococcus agalactiae
           A909]
 gi|76798200|ref|ZP_00780451.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
 gi|22533729|gb|AAM99602.1|AE014224_5 amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 2603V/R]
 gi|76561787|gb|ABA44371.1| polar amino acid uptake (PAAT) family ABC transporter, permease
           protein [Streptococcus agalactiae A909]
 gi|76586463|gb|EAO62970.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 18RS21]
          Length = 216

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 92/220 (41%), Gaps = 27/220 (12%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+  +    + S   G +L++      R+      K +  +YI           
Sbjct: 14  LQGFGLTLYISFISILLSMFFGTLLAIM-----RNSKNPIWKLIASIYIEFVR------- 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                      + P L     I          +   + + +T+A +AEI+R GL  V +G
Sbjct: 62  -----------NVPNLLWIFIIFLVFQMKSVSAGITSFTIFTSAALAEIIRGGLNGVDKG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGG 354
           Q EA ++ G T+ +   +++ PQA R ++P + SQ++ ++K++SL    +   ++     
Sbjct: 111 QTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQEIFGKSQ 170

Query: 355 TIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++ +     Q   +  I   +Y   + +I+ F  +L+ +
Sbjct: 171 ILMGRYFEAGQVFTLYAIITAVYFITNFIISSFSRKLSKR 210



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 35/64 (54%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L GF  T +++F  ++ +   GTL+   R S N +   I  +Y+E  RN+P L+ IF +
Sbjct: 13  LLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLLWIFII 72

Query: 149 YKSV 152
           +   
Sbjct: 73  FLVF 76


>gi|163758477|ref|ZP_02165565.1| putative transport system permease abc transporter protein [Hoeflea
           phototrophica DFL-43]
 gi|162284766|gb|EDQ35049.1| putative transport system permease abc transporter protein [Hoeflea
           phototrophica DFL-43]
          Length = 259

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 96/254 (37%), Gaps = 9/254 (3%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           LV++      ++          +  +   L     +   L   T+A  F+F+  LG    
Sbjct: 14  LVLLAIGVGIIIFAAVYMRWDWLPRYSGRLVEGVGTTLWLLFLTSALGFLFAVPLG---- 69

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGST 261
                L++        A   ++ +      L   + +                       
Sbjct: 70  -----LAQAAGPVWLSAPARMFCTVIRGTPLLLQLWLLYYGLGSLFAFWPEIRQSWAWPY 124

Query: 262 VSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMR 321
           +   +    +AL+   AA+  E++R     VP+G++EA  A G++     R + LP+A+ 
Sbjct: 125 LRSAWPYGVLALTMSFAAYEGEVMRGAFAGVPKGELEAGRAYGMSPFTVFRRIWLPRAIH 184

Query: 322 SIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMI 381
             +P L  + +  LK + L   +   D+ ++   +   T    E +L+   IY+ L+ ++
Sbjct: 185 RALPTLAGETVLQLKATPLVATITVVDVYAIISRVRQDTYLTYEPLLLLALIYMMLTGVL 244

Query: 382 ALFMNRLNAKIALK 395
            L    L A++ +K
Sbjct: 245 VLAFRWLEARVPVK 258


>gi|146319019|ref|YP_001198731.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|146321227|ref|YP_001200938.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|223932681|ref|ZP_03624680.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|253752084|ref|YP_003025225.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis SC84]
 gi|253753909|ref|YP_003027050.1| amino acid ABC transporter, permease protein [Streptococcus suis
           P1/7]
 gi|253755216|ref|YP_003028356.1| amino acid ABC transporter, permease protein [Streptococcus suis
           BM407]
 gi|145689825|gb|ABP90331.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 05ZYH33]
 gi|145692033|gb|ABP92538.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis 98HAH33]
 gi|223898651|gb|EEF65013.1| polar amino acid ABC transporter, inner membrane subunit
           [Streptococcus suis 89/1591]
 gi|251816373|emb|CAZ52004.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis SC84]
 gi|251817680|emb|CAZ55428.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis BM407]
 gi|251820155|emb|CAR46493.1| putative amino acid ABC transporter, permease protein
           [Streptococcus suis P1/7]
 gi|292558667|gb|ADE31668.1| ABC transporter membrane-spanning permease - glutamine transport
           [Streptococcus suis GZ1]
          Length = 219

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 22/195 (11%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R+      K +  +YI                      + P L     +     
Sbjct: 39  MILAIMRNGKNPIFKWIATIYIEFVR------------------NVPNLLWIFTVFLVFQ 80

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +   A + +T A +AEI+R GL A+  GQ EA ++ G T  +    +++PQA+R 
Sbjct: 81  MKSTPAGITAFTIFTTAAMAEIIRGGLNAIGPGQTEAGLSQGFTPVQIMVYIIMPQAIRK 140

Query: 323 IIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLS 378
           ++P + SQ + ++K++S L   +   +L      ++ +     Q   + ++   IY S++
Sbjct: 141 MLPAIISQIVTVIKDTSFLYSVIALQELFGSSQILMGRYFEAEQVFALYIMVALIYFSIN 200

Query: 379 IMIALFMNRLNAKIA 393
             I+     +    A
Sbjct: 201 FAISSLSRYVAKSWA 215



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T +++   +I + + G ++   R   N +  WI  +Y+E  RN+P L+ IF +
Sbjct: 16  LWSGLKLTLYISSISVILSILFGMILAIMRNGKNPIFKWIATIYIEFVRNVPNLLWIFTV 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|90419463|ref|ZP_01227373.1| putative ABC transporter permease protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336400|gb|EAS50141.1| putative ABC transporter permease protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 224

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 13/162 (8%)

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
            + R +     K L + Y+  F    LP LV + + Y             F+G       
Sbjct: 46  AMMRIYGHPILKFLVVAYVDVF--RALPVLVWLVIVYY---------ALPFVG--IRLSA 92

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F S   AL+  ++A+ AEI R+G+ A+PRGQ EAA ++GL+     R V+LPQA+R +IP
Sbjct: 93  FASATTALTMISSAYTAEIYRAGIEAIPRGQFEAAQSIGLSQWFLMRDVVLPQAIRIVIP 152

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII 367
           PLT+  +N++K+++LA  V   DL+               +I
Sbjct: 153 PLTNNSINVMKDTALASVVALPDLLKQATQAQALAANPTPLI 194



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 35/75 (46%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
            Y   +L G   T  L    ++   + G ++   R+  + ++ ++   YV+VFR +P LV
Sbjct: 15  RYYPLLLEGLWRTIALGALSIVLGLVGGLVLAMMRIYGHPILKFLVVAYVDVFRALPVLV 74

Query: 144 VIFFLYKSVLSVLPI 158
            +  +Y ++  V   
Sbjct: 75  WLVIVYYALPFVGIR 89


>gi|152983724|ref|YP_001349488.1| ABC transporter permease [Pseudomonas aeruginosa PA7]
 gi|150958882|gb|ABR80907.1| probable permease of ABC transporter [Pseudomonas aeruginosa PA7]
          Length = 221

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 15/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F        L           ++   S + GI+++L     +R    +  +A   
Sbjct: 1   MFDYTFHWRSAFNALPEMLAGSLVTLQVTALSMLFGILIALLL-AFARLGGNRPLRAAAG 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +IS  +    P L  I + Y           F           + +L   ++   A ++
Sbjct: 60  AWIS--IARNTPALFQIYILY-----------FGLGSFGLHVGSWFALLAGITFNNAGYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R GL AVP  Q+ AA +LG++  +A RLV++PQ +R +  PLT+Q +  +  +SL 
Sbjct: 107 AETFRGGLQAVPETQLRAARSLGMSAPQAYRLVVIPQLLRVVFYPLTNQLVWAMLMTSLG 166

Query: 342 VAVGFA-DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V VG   DL  V   +  +T +  E   +   +Y +++ ++ L    L  ++
Sbjct: 167 VVVGLTNDLTGVTQALNVKTFRTFEYFALAAVLYFAMAKLLVLAARLLGWRL 218



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 38/99 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +    M+   +I  L+   RL  N+ +      ++ + RN P L  I+ L
Sbjct: 18  MLAGSLVTLQVTALSMLFGILIALLLAFARLGGNRPLRAAAGAWISIARNTPALFQIYIL 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           Y  + S          L  G+  NN G    T      A
Sbjct: 78  YFGLGSFGLHVGSWFALLAGITFNNAGYLAETFRGGLQA 116


>gi|294679057|ref|YP_003579667.1| polar amino acid ABC transporter permease [Rhodobacter capsulatus
           SB 1003]
 gi|294477873|gb|ADE87260.1| polar amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 222

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 12/226 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-L 228
           FL+   +      +     + +    L I+LSL    +         +       +    
Sbjct: 3   FLDWAYILNAGPDLMRGLGMTLLVSGLAILLSLTLGAIGCVLRVSRLRPAAWAVAAYVEF 62

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV I   +                       F S  +AL+ + +AF  E  R+G
Sbjct: 63  IRGTPYLVQIFFIFY-----------GLPSLGVKLSIFWSGVLALTVWASAFHVESFRAG 111

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +V R    A+ +LGL   +   LV++P A+RS +P   +  +  +KNS+   A+G  +
Sbjct: 112 LSSVSRDIRNASASLGLRPWQHALLVVIPIALRSALPSTLNTVVGTIKNSAYLQAIGLVE 171

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  V    I Q  ++IE+ L    IYL + + ++    RL  ++  
Sbjct: 172 LTFVAVDRIAQDFRSIEMFLSICVIYLVVILGVSALGRRLEKRLNR 217



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  ++   ++ +  +G +    R+S  +  AW    YVE  R  P LV IFF+
Sbjct: 16  LMRGLGMTLLVSGLAILLSLTLGAIGCVLRVSRLRPAAWAVAAYVEFIRGTPYLVQIFFI 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +  + S+             + +        +  
Sbjct: 76  FYGLPSLGVKLSIFWSGVLALTVWASAFHVESFR 109


>gi|193083903|gb|ACF09582.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote KM3-72-G3]
          Length = 714

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 55/147 (37%), Positives = 94/147 (63%)

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
            D P         G  ++P F+++ + L+ +TA+ IAEIVR  + ++PRGQ+EAAI+L L
Sbjct: 563 IDSPGSWTIAEGSGFEITPFFLAMMLGLTLFTASTIAEIVRGSIQSLPRGQVEAAISLSL 622

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              +  RLV+LPQA+RS++P   +Q++N+ KNSSLAV V ++D+  V   ++N  G+ I 
Sbjct: 623 NPYQRLRLVILPQALRSMVPLFNNQFMNVWKNSSLAVIVAYSDIFYVILVMMNNVGKLIP 682

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKI 392
           + ++ +  Y + S+ I++ MN  N ++
Sbjct: 683 LFILLLITYQAGSLAISIVMNWYNTRV 709



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 61/148 (41%), Gaps = 2/148 (1%)

Query: 33  LALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD-SSYATAILV 91
             + L +  L+  ++    M+     +   F+ +   F+I+   +   ++       +  
Sbjct: 257 FIMFLLLRVLYLQHDPDPVMQNR-WQVSFPFMDKVNTFKINPWPMEVVANLDERWMFLKA 315

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
             +N+  +    ++   I+GT+VG  RLS+N L + +  VYVE+FRN+P  V++F +   
Sbjct: 316 AIINSARVTLLSIVLCVILGTIVGVTRLSSNWLASSMATVYVEIFRNLPLAVLLFLIATQ 375

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
                P+              +    + 
Sbjct: 376 FGQSAPLFKEETFFLGDAVFYSNQGIWF 403


>gi|170694816|ref|ZP_02885966.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
 gi|170140176|gb|EDT08354.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia graminis C4D1M]
          Length = 214

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 86/227 (37%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N                + V S  LGI L L    L R         + + Y+S     
Sbjct: 1   MNAFDYWSIVQGALATVVLSVASIALGIPLGLGL-ALIRWARVPFFHRIVVAYVSLIRSC 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
              TL L+       F   +                 +  +AL+  TAAF  EI R+ LI
Sbjct: 60  PAVTLTLLIFFALPQFGISL-------------DPTPAAILALTLSTAAFNCEIWRAALI 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR Q +AA+A  +  R   R +++PQ  R+ +P L S+    +K++     +G  ++ 
Sbjct: 107 NFPRDQYDAALAFAMPRRLRFRRIVMPQIWRAALPGLVSEMTLQIKSTPAVAVIGIVEIT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +  +T + +   +  + +Y  +  ++      +  +  ++ +
Sbjct: 167 RAALRVGARTYEPLPPFVFALVLYGLIVFVLIRAQRVIERRQPVEAR 213


>gi|86360205|ref|YP_472094.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284307|gb|ABC93367.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 241

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 79/178 (44%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           +L + T LI  +P L+LI   Y    D                  F++    L     A+
Sbjct: 62  MLDLYTTLIRAVPELILIVGLYYAGTDGLNRLLAALELPPVNVNGFVAAVAVLGFVQGAY 121

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E++R  ++A+P GQ+EAA A G+      R VLLP  + + +P L + ++++ K+S+L
Sbjct: 122 MTEVLRGAILAIPTGQIEAAKAFGMGPVLRFRRVLLPALLPNALPGLANLWMSVTKDSAL 181

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
              VG+ +L          T       L    +YL++++   +    +  ++   + +
Sbjct: 182 VAVVGYQELALATRLAGASTKHYFIFFLASALLYLAITLASNVVFKLIEGRVRRGQPR 239


>gi|294787060|ref|ZP_06752314.1| glutamate permease [Parascardovia denticolens F0305]
 gi|315226710|ref|ZP_07868498.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Parascardovia denticolens DSM 10105]
 gi|294485893|gb|EFG33527.1| glutamate permease [Parascardovia denticolens F0305]
 gi|315120842|gb|EFT83974.1| glutamate ABC superfamily ATP binding cassette transporter,
           membrane protein [Parascardovia denticolens DSM 10105]
          Length = 229

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 13/240 (5%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
                     +F     +    + ++      +FS ++G +L +      R     + + 
Sbjct: 1   MSEFFSGFASLFREYNIVGAFWVNIEITFWAALFSMIIGTILVMM-----RISPVDSLRG 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
               Y   F       L +I +   L F   +   F+          F      LS YTA
Sbjct: 56  FSAAYTEFFKNMP---LTIIMVFMVLGFFGQLKLGFSDDFTINF---FWLAVTGLSLYTA 109

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           +F++E +RSG+  +P GQ EA+ ALGLT  ++   V+LPQA+R  I PL +  + LLKNS
Sbjct: 110 SFVSESLRSGINTIPVGQAEASRALGLTFFQSITSVILPQALRGSIAPLGNTLIALLKNS 169

Query: 339 SLAVAVGFADLVS--VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++A A       S  +   +     Q ++I L++   Y+ L I I L    L+ ++A++ 
Sbjct: 170 TVAAAASVTTETSSLMSEMLEFHPSQIVQIFLVFALGYVILIIPIGLLTTYLSNRLAVRR 229



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A  V    TFW A      + IIGT++   R+S    +      Y E F+N+P  +++ F
Sbjct: 20  AFWVNIEITFWAAL----FSMIIGTILVMMRISPVDSLRGFSAAYTEFFKNMPLTIIMVF 75

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGL 176
           +       L +           +L   GL
Sbjct: 76  MVLGFFGQLKLGFSDDFTINFFWLAVTGL 104


>gi|154173667|ref|YP_001408466.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           curvus 525.92]
 gi|112802706|gb|EAU00050.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter curvus 525.92]
          Length = 222

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 92/229 (40%), Gaps = 18/229 (7%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +  + + L      +  + +I + S V+ ++  LF   L       + K   + Y    
Sbjct: 5   SILFDWQNLVRLAEGLLVSTEISLVSIVISLIGGLFLGVLM------SSKNKFIFYTLKI 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +  +  +  I   +  +F        +          F +  I  S +    + +IVR 
Sbjct: 59  CLEIVRIMPQIVWLFLFYFGVSKAFGIHL-------SAFNASLIVFSLWGVFEMMDIVRG 111

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            + ++P+ Q E+A +LGL+  +    V++P A R ++P   +    ++K +S+ V +G  
Sbjct: 112 AIASIPKHQFESAASLGLSKMQIYAYVIIPLATRRLVPGAVNLLSRMIKTTSIVVLIGVI 171

Query: 348 DLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++V VG  II +           I  +  F+Y  +   I+    RL  K
Sbjct: 172 EVVKVGQQIIERNVFTNPMAPFWIYGLIFFLYFIVCFPISKLSKRLEEK 220


>gi|293380807|ref|ZP_06626848.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
 gi|290922631|gb|EFD99592.1| ABC transporter, permease protein [Lactobacillus crispatus 214-1]
          Length = 216

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       +     + T+  I   S ++G+ +      L R    +  + +  LY+  F 
Sbjct: 1   VLFEGSNFARLMAGLWTSIWIAALSLIIGLAVGTIFGIL-RTLKNRPIRFVLRLYLEFFR 59

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I     L+     Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 60  IVPTVVLL-----YLVYYILPRSLHVNW-------PATWMAVLAFSMWVAAEFSDIVRGA 107

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L + P+ Q E+ +ALGL   +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 108 LESFPKTQRESGLALGLNRLQLFRYVLLPQAVKLELPATINLATRVIKTTSLLMIINIME 167

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +++VG  II    Q        +      +Y  L   ++ +  RL AK
Sbjct: 168 VINVGQQIIEANNQQYPAGVFWVYGFIFILYFILDYPLSAWAKRLTAK 215



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 42/85 (49%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   + W+A   +I    +GT+ G  R   N+ + ++ R+Y+E FR +P +V+++ +
Sbjct: 11  LMAGLWTSIWIAALSLIIGLAVGTIFGILRTLKNRPIRFVLRLYLEFFRIVPTVVLLYLV 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +   L +   +  +    F   
Sbjct: 71  YYILPRSLHVNWPATWMAVLAFSMW 95


>gi|294083878|ref|YP_003550635.1| putative permease of ABC transporter [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663450|gb|ADE38551.1| putative permease of ABC transporter [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 219

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 14/230 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F      R L           ++ + + + GI++   A  L + +  +  +A    
Sbjct: 1   MDYNFHWRPVFRKLDQLIAAGLVTMEVAMLAMLCGILIG-MALALMKMYGNRPMRAFAYG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           +I   +    P L+ +               F           F+ +   LS   A ++A
Sbjct: 60  WIE--IARNTPALLQLFF-----------FGFGLGALGIHLSPFLIVLFGLSFNNAGYLA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R G  A+P  Q+ AA +LG++  +    + +PQ  R +  P+T+Q +  +  SSL +
Sbjct: 107 ETFRGGFNAIPNTQIRAARSLGMSITQTYLRIAIPQVFRIVYHPMTNQLVWSVLMSSLGM 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            VGF +L      +  +T +  E  L    IY ++  +I      +  ++
Sbjct: 167 LVGFRELSGETQFLAFKTFRIFEYFLAAAIIYYAIVKIILGLSWIIGRRL 216



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 65/183 (35%), Gaps = 3/183 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++   + T  +A   M+   +IG  +   ++  N+ +      ++E+ RN P L+ +FF 
Sbjct: 17  LIAAGLVTMEVAMLAMLCGILIGMALALMKMYGNRPMRAFAYGWIEIARNTPALLQLFFF 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
              + ++       +++ FG+  NN G    T     NA   + +  +    SL  +   
Sbjct: 77  GFGLGALGIHLSPFLIVLFGLSFNNAGYLAETFRGGFNA---IPNTQIRAARSLGMSITQ 133

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
            +      +   ++Y           L+          +     QF       +   F++
Sbjct: 134 TYLRIAIPQVFRIVYHPMTNQLVWSVLMSSLGMLVGFRELSGETQFLAFKTFRIFEYFLA 193

Query: 269 LYI 271
             I
Sbjct: 194 AAI 196


>gi|25010743|ref|NP_735138.1| hypothetical protein gbs0688 [Streptococcus agalactiae NEM316]
 gi|77408350|ref|ZP_00785091.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|77410781|ref|ZP_00787139.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77413503|ref|ZP_00789693.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|23095097|emb|CAD46332.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160447|gb|EAO71568.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae 515]
 gi|77163160|gb|EAO74113.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae CJB111]
 gi|77173031|gb|EAO76159.1| amino acid ABC transporter, permease protein [Streptococcus
           agalactiae COH1]
 gi|319744753|gb|EFV97095.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Streptococcus agalactiae ATCC 13813]
          Length = 216

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 92/220 (41%), Gaps = 27/220 (12%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+  +    + S   G +L++      R+      K +  +YI           
Sbjct: 14  LQGFGLTLYISFISILLSMFFGTLLAIM-----RNSKNPIWKLIASIYIEFVR------- 61

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
                      + P L     I          +   + + +T+A +AEI+R GL  V +G
Sbjct: 62  -----------NVPNLLWIFIIFLVFQMKSVSAGITSFTIFTSAALAEIIRGGLNGVDKG 110

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVGFADLVSVGG 354
           Q EA ++ G T+ +   +++ PQA R ++P + SQ++ ++K++SL    +   ++     
Sbjct: 111 QTEAGLSQGFTYLQVFIIIIFPQAFRKMLPAIISQFVTVIKDTSLLYSVIAIQEIFGKSQ 170

Query: 355 TIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            ++ +     Q   +  I   +Y   + +I+ F  +L+ +
Sbjct: 171 ILMGRYFEAGQVFTLYAIITAVYFITNFIISSFSRKLSKR 210



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 36/69 (52%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L GF  T +++F  ++ +   GTL+   R S N +   I  +Y+E  RN+P L+
Sbjct: 8   TNILFLLQGFGLTLYISFISILLSMFFGTLLAIMRNSKNPIWKLIASIYIEFVRNVPNLL 67

Query: 144 VIFFLYKSV 152
            IF ++   
Sbjct: 68  WIFIIFLVF 76


>gi|308071224|ref|YP_003872829.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
 gi|305860503|gb|ADM72291.1| ABC-type amino acid transport system, permease component
           [Paenibacillus polymyxa E681]
          Length = 225

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I + S ++G +L +    L      +T K+ P+ ++    +     + ++   Y +
Sbjct: 24  VTLEIALLSIIIGTLLGILMGLL------RTLKSRPIRFVLKLYLETFRIIPILVWLYVV 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F    L   N  G        ++  I  S + AA I +IVR  L ++P+ Q+E+  ALG
Sbjct: 78  YFGFTPLLNVNISGE-------LTAIIVFSLWGAAEIGDIVRGALESLPKHQVESGQALG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN-----Q 359
           LT+ +  R VL+PQA+R ++P   +    ++K +SL V +G  ++V VG  II       
Sbjct: 131 LTYGQLYRHVLIPQAVRRMLPGSINLATRMIKTTSLVVLIGVVEVVKVGQQIIELGVIKA 190

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              +  +      +Y  +   ++    R   +
Sbjct: 191 PSASFWVYGFIFILYFLVCYPLSRLSKRFERR 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 37/65 (56%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   +I  T++G L+G  R   ++ + ++ ++Y+E FR IP LV ++ +
Sbjct: 18  LLGGLLVTLEIALLSIIIGTLLGILMGLLRTLKSRPIRFVLKLYLETFRIIPILVWLYVV 77

Query: 149 YKSVL 153
           Y    
Sbjct: 78  YFGFT 82


>gi|169630135|ref|YP_001703784.1| putative glutamate ABC transporter, permease [Mycobacterium
           abscessus ATCC 19977]
 gi|169242102|emb|CAM63130.1| Putative glutamate ABC transporter, permease [Mycobacterium
           abscessus]
          Length = 227

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 4/226 (1%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
                        T  ++  FS V  +V         R       +     Y++  ++  
Sbjct: 5   WASMGPQLWPAFWTTLRLTFFSAVGALVWGTLLAEF-RVSPVPVMRIFGTWYVN--VVRN 61

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  ++I       +    +           +  F    +  S YTA F+ E +RSG   
Sbjct: 62  TPLTLIILFCSVGLYQNLGIALAPENSNFIKNNNFWLSVLGFSLYTATFVCETLRSGFNT 121

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ EAA +LGL   +   L++LPQAMRS++ P+ S  + L+KN+S+A A+G A+   
Sbjct: 122 VPLGQAEAARSLGLPFWRVLTLIVLPQAMRSVLAPMGSVLIALVKNTSIASAIGVAEAAL 181

Query: 352 VGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +  + I     Q + I LI    Y+ +++ I L       ++A+K 
Sbjct: 182 LMRSEIELFADQIVWIFLIIAAGYMVITLTIGLSFGYFAKRLAVKR 227



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 32/84 (38%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           S    +   F  T  L F   + A + GTL+   R+S   ++      YV V RN P  +
Sbjct: 7   SMGPQLWPAFWTTLRLTFFSAVGALVWGTLLAEFRVSPVPVMRIFGTWYVNVVRNTPLTL 66

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPF 167
           +I F    +   L I        F
Sbjct: 67  IILFCSVGLYQNLGIALAPENSNF 90


>gi|302558021|ref|ZP_07310363.1| glutamate permease [Streptomyces griseoflavus Tu4000]
 gi|302475639|gb|EFL38732.1| glutamate permease [Streptomyces griseoflavus Tu4000]
          Length = 225

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 21/233 (9%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLY 223
           + +   L    +T+       V S V G +L+          R     +    + +PL  
Sbjct: 8   YDDPTLLGAFWMTVKLTVFSGVGSLVWGTLLAAMRVSPVPLMRWFGTAYVNIVRNIPLTV 67

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           I  F   GL  +  + +     F                   F    + L+ YTAAF+ E
Sbjct: 68  IIVFTSLGLADIFGVTMGAPDDFALQ---------------GFRLAVLGLAAYTAAFVCE 112

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +RSG+  VP GQ EAA ALGL   +   L++LPQA RS+I PL +  + L KN+++A A
Sbjct: 113 ALRSGINTVPVGQAEAARALGLNFTQVLSLIVLPQAFRSVIGPLANVLIALTKNTTVAAA 172

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G A+   +   +I    Q + I  ++ F ++ L++   LF+  L+ ++A+K 
Sbjct: 173 IGVAEAALLMKEMIENEAQTLLIGAVFAFGFVVLTLPTGLFLGWLSKRLAVKR 225



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 32/68 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     + + + GTL+ A R+S   L+ W    YV + RNIP  V+I F 
Sbjct: 13  LLGAFWMTVKLTVFSGVGSLVWGTLLAAMRVSPVPLMRWFGTAYVNIVRNIPLTVIIVFT 72

Query: 149 YKSVLSVL 156
              +  + 
Sbjct: 73  SLGLADIF 80


>gi|330861365|emb|CBX71600.1| histidine transport system permease protein hisM [Yersinia
           enterocolitica W22703]
          Length = 251

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 2/203 (0%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT-LVLIALKYQ 243
             AK+F+ S V G++L+L    + + F  +    L       F    L   L+LI     
Sbjct: 26  VTAKLFLLSVVPGLLLALV-MAVGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIYYGLS 84

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                 +  Q +               +AL   T+A++AE++   ++  PR +  A  A 
Sbjct: 85  QFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVAGEAF 144

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G++  +  R ++LP  +R  IP L ++ + LL  +SLA  V   D+  V       T   
Sbjct: 145 GMSQWQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARAFYAATYSP 204

Query: 364 IEIILIWMFIYLSLSIMIALFMN 386
               L+   +YL  + M+    +
Sbjct: 205 FIPFLMAAALYLLCTFMLIFCFH 227



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 2/148 (1%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           + G   T  L    ++P  ++  ++  G+    + +AW+ R     FR+ P  + +  +Y
Sbjct: 21  MTGLAVTAKLFLLSVVPGLLLALVMAVGQAFGPRPLAWLIRSVTYFFRSTPLYLQLMLIY 80

Query: 150 KSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSR 209
             +     +            L        TL +  N   +V   + G++++        
Sbjct: 81  YGLSQFDIVQLGWQDDQPFWLLFRDATFCATLALVLNTSAYVAELLAGMMVTFPRQEWVA 140

Query: 210 --HFHEKTGKALPLLYISTFLIFGLPTL 235
              F     + +  L +   L  G+P L
Sbjct: 141 GEAFGMSQWQIIRRLVLPATLRRGIPAL 168


>gi|59802320|ref|YP_209032.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|194099716|ref|YP_002002851.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999905|ref|ZP_04719829.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae 35/02]
 gi|240013148|ref|ZP_04720061.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae DGI18]
 gi|240015591|ref|ZP_04722131.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA6140]
 gi|240081801|ref|ZP_04726344.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA19]
 gi|240114080|ref|ZP_04728570.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae MS11]
 gi|240114681|ref|ZP_04728743.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID18]
 gi|240116883|ref|ZP_04730945.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID1]
 gi|240120219|ref|ZP_04733181.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID24-1]
 gi|240122517|ref|ZP_04735473.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae PID332]
 gi|240127227|ref|ZP_04739888.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae SK-93-1035]
 gi|260441512|ref|ZP_05795328.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae DGI2]
 gi|268595714|ref|ZP_06129881.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           35/02]
 gi|268597900|ref|ZP_06132067.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           FA19]
 gi|268600150|ref|ZP_06134317.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           MS11]
 gi|291044875|ref|ZP_06570584.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|293397953|ref|ZP_06642159.1| glutamine transport system permease [Neisseria gonorrhoeae F62]
 gi|59719215|gb|AAW90620.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae FA 1090]
 gi|193935006|gb|ACF30830.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae NCCP11945]
 gi|268549103|gb|EEZ44521.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           35/02]
 gi|268551688|gb|EEZ46707.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           FA19]
 gi|268584281|gb|EEZ48957.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           MS11]
 gi|291011769|gb|EFE03765.1| amino acid ABC transporter [Neisseria gonorrhoeae DGI2]
 gi|291611899|gb|EFF40968.1| glutamine transport system permease [Neisseria gonorrhoeae F62]
 gi|317165200|gb|ADV08741.1| putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 222

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             ++  F +  +  + ++   + 
Sbjct: 24  QISLISVAASCVLGTLFGLVLRSRNRLVR----------FVGRFYLETIRIVPILVWLFG 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       S +  A + ++VR  L ++ + Q+E+ +A 
Sbjct: 74  LYFGLSVWTGIHIGG-------FWVCVWVFSLWGVAEMGDLVRGALESIEKHQVESGLAP 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+  +  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRGQVFRCIELPQSIRRVLPGAVNLFTRMIKTSSLAWLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQK 219



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV ++ R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRFVGRFYLETIRIVPILVWLFGLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIGGFWVCVWVFSLW 99


>gi|293375604|ref|ZP_06621878.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
 gi|292645821|gb|EFF63857.1| ABC transporter, permease protein [Turicibacter sanguinis PC909]
          Length = 219

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 109/226 (48%), Gaps = 16/226 (7%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL---FATRLSRHFHEKTGKALPLLYISTF 227
           ++ + +          AK+ +   +LGI+LS    F   L R++     + +  +YI   
Sbjct: 1   MDFQFIKTYAPMYVEAAKLTMSIALLGILLSTLVGFICCLIRYYKIPILQRVIGMYIE-- 58

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L    P L+ +   + L+F  P LG F           +    + L+    +++AE  RS
Sbjct: 59  LSRNTPLLIQL---FFLYFGLPKLGIF--------LSSYACGVLGLTFLGGSYMAEAFRS 107

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL ++P  QME+ ++LGLT  +  R ++ PQA+   +P  ++  + L+K +S+   V  A
Sbjct: 108 GLESIPDIQMESGLSLGLTKWQVLRYIIFPQAVAVSLPAFSANVIFLIKETSVFSVVALA 167

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL+ V   +I    +  E +L+ +  YL L + I+L ++ +  K+ 
Sbjct: 168 DLMYVAKGLIGLYYKTDESLLMLVVAYLVLLLPISLILSVIEKKVR 213



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 39/82 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +    +YA   +     T  +A  G++ +T++G +    R     ++  +  +Y+E+ 
Sbjct: 1   MDFQFIKTYAPMYVEAAKLTMSIALLGILLSTLVGFICCLIRYYKIPILQRVIGMYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPI 158
           RN P L+ +FFLY  +  +   
Sbjct: 61  RNTPLLIQLFFLYFGLPKLGIF 82


>gi|163735054|ref|ZP_02142491.1| histidine ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
 gi|161391836|gb|EDQ16168.1| histidine ABC transporter, permease protein [Roseobacter litoralis
           Och 149]
          Length = 268

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 17/222 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +       +  F L   +++      R F + +           F+  G P  +  
Sbjct: 40  MIWNIYFGLVALICGFFLATAVAVGKASPRRIFRKPS-------EWFIFIFRGSPLFIQF 92

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y L      +           +  ++   I L   TAA+  EI    L ++P+G  E
Sbjct: 93  FFGYFLFLSLKSVSPIF----DPFTAAWLGALIVLFFNTAAYSGEIFYGALQSIPKGDTE 148

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSV 352
           AA A G+T     R V+ P  +R   P  T++ + L   ++L    GF       D +  
Sbjct: 149 AADAYGMTGWARFRRVIWPTMLRLAWPAYTNEAIFLFHATALVFLSGFPAWQQRGDALYY 208

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                ++T        I    ++ L++++      +NA++  
Sbjct: 209 ASYFADKTFNPFVPYPILAGYFILLTLIVVGIFGLVNARLNR 250


>gi|294631809|ref|ZP_06710369.1| glutamate permease [Streptomyces sp. e14]
 gi|292835142|gb|EFF93491.1| glutamate permease [Streptomyces sp. e14]
          Length = 221

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 10/231 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L    +T+         S V G +L+       R       +     Y++
Sbjct: 1   MFDFLSGYDLLGAFWVTVQLTLLSAAGSLVWGTLLAGM-----RVGPVPLMRGFGTAYVN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L  ++L                 N    +  +  F    + L  YT+AF+ E +
Sbjct: 56  IVRNIPLTVIILFT-----SLGLNQTLGVNLGSQNFDTINFRFAVLGLIAYTSAFVCEAI 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP GQ EAA ALGL+  +   LV+LPQA RS++ PLT+  + L KN+++A A+G
Sbjct: 111 RSGINTVPVGQAEAARALGLSFTQVLTLVVLPQAFRSVVGPLTNVLIALTKNTTVAAAIG 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+   +  T+I    Q + I  ++ F ++ L++   L +  +  K+A+K 
Sbjct: 171 VAEAAFLMKTMIENEAQLLAISAVFAFGFVCLTLPTGLILGWVGKKVAVKR 221



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L       + + GTL+   R+    L+      YV + RNIP  V+I F 
Sbjct: 10  LLGAFWVTVQLTLLSAAGSLVWGTLLAGMRVGPVPLMRGFGTAYVNIVRNIPLTVIILFT 69

Query: 149 YKSVLSV 155
              +   
Sbjct: 70  SLGLNQT 76


>gi|288905437|ref|YP_003430659.1| amino acid ABC transporter, permease protein [Streptococcus
           gallolyticus UCN34]
 gi|288732163|emb|CBI13728.1| putative amino acid ABC transporter, permease protein
           [Streptococcus gallolyticus UCN34]
          Length = 231

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L      +     I + S V+ IV   F          +  + L  +Y+    
Sbjct: 14  VLFQGNNLWRLFQGLLVTINISLLSIVISIVFG-FLFGFVMTSRFRIVRVLAQIYLEFIR 72

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        + L + ++F        N  G        ++  I  S +  A + ++VR  
Sbjct: 73  IMP-----QLVLLFLVYFGLARTFNLNLSGE-------VAALIVFSMWGIAEMGDLVRGA 120

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P+ Q E+ +ALGLT  +    V++PQ +R ++P   +    ++K +SL V +G  +
Sbjct: 121 LTSLPKHQFESGLALGLTKTQLFIYVIIPQILRRLLPQAVNLMTRMIKTTSLIVLIGVVE 180

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           +V VG  II      +      I  +   +Y ++   I+     L  
Sbjct: 181 VVKVGQQIIEANRLTVPSAAIWIYGLIFLMYFAVCFPISRLSMYLEK 227



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 43/105 (40%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           G+ +    +      +    +  G + T  ++   ++ + + G L G    S  ++V  +
Sbjct: 4   GYVVQDSGLQVLFQGNNLWRLFQGLLVTINISLLSIVISIVFGFLFGFVMTSRFRIVRVL 63

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            ++Y+E  R +P LV++F +Y  +     +     V    +F   
Sbjct: 64  AQIYLEFIRIMPQLVLLFLVYFGLARTFNLNLSGEVAALIVFSMW 108


>gi|324324592|gb|ADY19852.1| amino acid ABC transporter, permease [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 221

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 91/223 (40%), Gaps = 14/223 (6%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      +     +     KI  F+ ++ + ++     L   F       +   Y+   +
Sbjct: 5   IDFMKEQIPLFVDSALLTLKIACFAIIISLFIA-SINGLILFFRIHIIHKVVRAYVE--V 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
               P L+ +   Y           F           F    +A+      ++ E++RSG
Sbjct: 62  ARNTPLLIQLFFLY-----------FGLPSLGIKLSNFSIALLAMCFLGGGYMTEVIRSG 110

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++ + Q+E+  A+GL   +  R V+LPQA     P L + ++ LLK +S+  A+   +
Sbjct: 111 LDSISKSQVESGYAIGLNKWQLFRFVVLPQAATISAPALFANFIFLLKETSIVSAIAVPE 170

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           L+     +I+   +  E++++    Y+ L + ++  ++ L  +
Sbjct: 171 LLYTTTNLISIYYKTSEMLIMLTASYIFLFVPLSFLLSWLERR 213



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            +   + T  +A   +I +  I ++ G        ++  + R YVEV RN P L+ +FFL
Sbjct: 15  FVDSALLTLKIACFAIIISLFIASINGLILFFRIHIIHKVVRAYVEVARNTPLLIQLFFL 74

Query: 149 YKSVLSVLPI 158
           Y  + S+   
Sbjct: 75  YFGLPSLGIK 84


>gi|239928549|ref|ZP_04685502.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
 gi|291436874|ref|ZP_06576264.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
 gi|291339769|gb|EFE66725.1| glutamate permease [Streptomyces ghanaensis ATCC 14672]
          Length = 221

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 10/231 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F    +   L     T+       V S + G +L+       R       +     Y++
Sbjct: 1   MFDFLEDYDLLGAFWTTVQLAVLSAVGSLIWGTLLAAM-----RVGPVPLMRGFGTAYVN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L  ++L                 +       +  F    + L  YT+AF+ E +
Sbjct: 56  IVRNIPLTVIILFT-----SLGLNQTLGISLGADDFETINFRLAVLGLILYTSAFVCEAI 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP GQ EAA A+GL+  +   LV+LPQA RS + PL +  + L+KN+++A A+G
Sbjct: 111 RSGINTVPVGQAEAARAIGLSFNQVLGLVVLPQAFRSSVGPLANVLIALIKNTTVAAAIG 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+   +   +I    Q + I  +  F ++ L++   LF+  +  K+A+K 
Sbjct: 171 VAEAALLMKEMIENEAQLLLISAVIAFGFVVLTLPTGLFLGWVGKKVAVKR 221



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  LA    + + I GTL+ A R+    L+      YV + RNIP  V+I F 
Sbjct: 10  LLGAFWTTVQLAVLSAVGSLIWGTLLAAMRVGPVPLMRGFGTAYVNIVRNIPLTVIILFT 69

Query: 149 YKSVLSV 155
              +   
Sbjct: 70  SLGLNQT 76


>gi|312602225|ref|YP_004022070.1| Amino acid ABC transporter permease [Burkholderia rhizoxinica HKI
           454]
 gi|312169539|emb|CBW76551.1| Amino acid ABC transporter permease protein [Burkholderia
           rhizoxinica HKI 454]
          Length = 231

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 100/204 (49%), Gaps = 13/204 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-----ISTFLIFGLPTLVLIALKYQLH 245
           +    L +VL+L +  +S       G AL L       +   +I     + ++ L +  +
Sbjct: 25  LGGVALTLVLALTSAFVSGVLGLAAGIALALTRGAVHTVLLAVIGFFRAIPVLMLMFWTY 84

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  PV+   +       +P  +++  ALS    A+++  V +G+ AV   Q++A ++LG 
Sbjct: 85  FLLPVVLHID-------APGQLTVVCALSLIGGAYLSHAVYAGIRAVGAAQLQAGLSLGF 137

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +A R V+LPQA+R + P   +Q+++L+K++SLA  VG  +L  +   + N+      
Sbjct: 138 TRMQALRFVVLPQALRIMAPSFINQWVSLIKDTSLAYIVGVPELSLLATQVNNRLMVYPA 197

Query: 365 EIILIWMFIYLSLSIMIALFMNRL 388
           +I  +  FIY+ +        +RL
Sbjct: 198 QIFALVAFIYVLICTAFDAIASRL 221


>gi|190892982|ref|YP_001979524.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190698261|gb|ACE92346.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 235

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 10/212 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   +   G VL+L AT   R         L  LY+S      +P ++ + + + 
Sbjct: 15  PLTLAITFTAMAAGFVLALIATTF-RVRRIPVISQLADLYVSYA--RSVPVVLQLFVAF- 70

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  PVL      G        ++  + LS Y   +++E++R   +AV RGQ +AA +L
Sbjct: 71  --YGLPVLVGMF--GVEDFVSPNIAAMLGLSLYHGGYLSEVMRPAYLAVERGQHDAADSL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-- 361
           G T R+    VL PQA+   +P   +  + L+ N +L + +G AD+++    ++ +    
Sbjct: 127 GYTFRQKLLRVLAPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMERDYNQ 186

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              E  L+   +Y  L ++  L +     + A
Sbjct: 187 YQFETYLVLAVLYSVLCLVAWLVVRFFELRSA 218


>gi|91783383|ref|YP_558589.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91687337|gb|ABE30537.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 235

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 4/233 (1%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           + L F    +    ++    + T   + V +  L  V+ +    L    + +      L 
Sbjct: 1   MSLDFSWLADPVYQTWLLRGIGTTVAVCVCAIALMFVIGIIGAAL---IYFRVPVLETLT 57

Query: 223 YISTFLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            +   L+   P LV +  L + L      +          V   F  + ++L+ Y  +  
Sbjct: 58  TVVVELLRNTPPLVQLFVLYFTLSELGLSVRNLATGQQIPVFSGFTCMVLSLALYNGSIA 117

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            EIVRSGL AVP   ++AA +LG +  +    + LP AMR     +T+  ++L+K SS A
Sbjct: 118 VEIVRSGLHAVPDATVDAARSLGYSRLRIFWHIQLPMAMRLSTTQMTNNIVSLIKTSSQA 177

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             V  AD++     I  +  + +E++L     YL L+   +    R+   + +
Sbjct: 178 AFVAVADVMYYATQITLENFRNLEVMLTVWVCYLVLASFASTVAGRIGRAVRI 230



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           + +D  Y T +L G   T  +    +    +IG +  A       ++  +  V VE+ RN
Sbjct: 7   WLADPVYQTWLLRGIGTTVAVCVCAIALMFVIGIIGAALIYFRVPVLETLTTVVVELLRN 66

Query: 139 IPPLVVIFFLYKSVLSV 155
            PPLV +F LY ++  +
Sbjct: 67  TPPLVQLFVLYFTLSEL 83


>gi|326317638|ref|YP_004235310.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323374474|gb|ADX46743.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 250

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 102/249 (40%), Gaps = 7/249 (2%)

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           +    L    +  L     +             +    +T+         S   G+VL+ 
Sbjct: 1   MHDTGLLAQGVDALRGIGLNYAFVLDATERQAFVRGMGVTVQLALLTIPCSLAAGVVLA- 59

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
             T   R +  +  +A         +    PTLV +   + +          ++  G   
Sbjct: 60  ACTASGRAWLARPARAF------VEVTRNTPTLVQLYCAFLVLNMLITQQLRDWGAGQNP 113

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F+ + + +S +  AF AE +R+G+ AVP   +EAA +LG + R+    V LP A R 
Sbjct: 114 LTPFVWVVVVISLHKGAFHAEALRAGIEAVPATTLEAARSLGFSQRQLLARVQLPLAARF 173

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P L +  ++L+K +++A A+   D+      I +Q    +E++L+ +  +  L+ +++
Sbjct: 174 ALPSLVNNLVDLVKMTAVASAIAVGDVTYESIMIWSQRDNVLELLLLILIWFGLLTWLVS 233

Query: 383 LFMNRLNAK 391
           L    L  +
Sbjct: 234 LAGRWLEER 242



 Score = 39.5 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 35/87 (40%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             +  D++   A + G   T  LA   +  +   G ++ A   S    +A   R +VEV 
Sbjct: 21  YAFVLDATERQAFVRGMGVTVQLALLTIPCSLAAGVVLAACTASGRAWLARPARAFVEVT 80

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSI 163
           RN P LV ++  +  +  ++       
Sbjct: 81  RNTPTLVQLYCAFLVLNMLITQQLRDW 107


>gi|288936938|ref|YP_003440997.1| binding-protein-dependent transporters inner membrane component
           [Klebsiella variicola At-22]
 gi|288891647|gb|ADC59965.1| binding-protein-dependent transport systems inner membrane
           component [Klebsiella variicola At-22]
          Length = 229

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 18/208 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +   GI L+  A R         G    LL++   +I G+P   LI + + L +
Sbjct: 36  IGATLLALPGGIALAGLAWRYG-------GLVRRLLFLWAEIIRGIP---LIFVIFWLWY 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P  +++ +AL+ +TAA +   V +GL ++P+GQ EAA+  G  
Sbjct: 86  LLPMLTGGDL-------PGAVTVTLALAWFTAASVMHSVLAGLQSLPKGQYEAALTQGFA 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
             +  RLVLLPQA+R++ P L   ++ LLK++SLA  V   +L +V G + N+     + 
Sbjct: 139 PGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSLAFIVNVPELTTVAGQVNNRVQIYPLA 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I +    +Y  L   ++L  +R   + A
Sbjct: 199 IFVFTGAVYYLLCCGLSLLASRRFTRRA 226


>gi|297191654|ref|ZP_06909052.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721588|gb|EDY65496.1| glutamate transporter permease [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 222

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 21/237 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKAL 219
            F        L    +T+       + S VLG VL+          R     +    + +
Sbjct: 1   MFDFLEGYDLLGAFWVTVKLTIFSAIGSLVLGTVLAAMRVSPVPLMRTFGMVYVNVVRNI 60

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  I  F   GL  +  + L     F+                  F      L+ YTAA
Sbjct: 61  PLTVIIVFSSLGLADVFGMTLGAADDFEVKY---------------FRLAVFGLAAYTAA 105

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+ E VRSG+  VP GQ EAA A+GL+  +    V+LPQA RS++ PLT+  + L KN++
Sbjct: 106 FVCEAVRSGINTVPVGQAEAARAIGLSFTQVLSHVVLPQAFRSVVGPLTNVLIALTKNTT 165

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +A A+G A+   V   +I    Q + I  I+ F ++ L++   L +  +  ++A+K 
Sbjct: 166 VAAAIGVAEAALVMKEMIENEAQLVLISAIFAFGFVVLTLPTGLILGWVGKRVAVKR 222



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 34/70 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     I + ++GT++ A R+S   L+     VYV V RNIP  V+I F 
Sbjct: 10  LLGAFWVTVKLTIFSAIGSLVLGTVLAAMRVSPVPLMRTFGMVYVNVVRNIPLTVIIVFS 69

Query: 149 YKSVLSVLPI 158
              +  V  +
Sbjct: 70  SLGLADVFGM 79


>gi|227514605|ref|ZP_03944654.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus fermentum ATCC 14931]
 gi|227087016|gb|EEI22328.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus fermentum ATCC 14931]
          Length = 235

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 89/237 (37%), Gaps = 16/237 (6%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF---ATRLSRHFHEKTG 216
              I    G+F++   +       +      ++   +GIV SL       L + F     
Sbjct: 6   FDEIEWKEGLFVSWEVIQQSLPMFEQGLIATLWLSAVGIVGSLIVGVIVSLVQFFRVPVL 65

Query: 217 KALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCY 276
           + +  +Y+   +    P L+ +   Y             F              + L   
Sbjct: 66  RQVCTVYVE--ISRNTPLLIQLFFLYY-----------AFPVIGLKMNAVTCGIVGLIFL 112

Query: 277 TAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLK 336
             +++AE    G   V +GQ+E   A+G+   +  R V+ PQ     +P L +  + L+K
Sbjct: 113 GGSYMAEGFTGGFAGVSKGQLETGKAIGMNQWQLARYVVFPQGFALSMPALAANMIFLIK 172

Query: 337 NSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +S+   +   +L +    +I    ++ E +L+ +  Y  + I + L +N L  ++ 
Sbjct: 173 ETSIFSVIAIPELTNTALDLIGLYYRSNEYLLVLVIGYAIILIPLILVLNWLERRVR 229



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T WL+  G++ + I+G +V   +     ++  +C VYVE+ RN P L+ +FFL
Sbjct: 29  FEQGLIATLWLSAVGIVGSLIVGVIVSLVQFFRVPVLRQVCTVYVEISRNTPLLIQLFFL 88

Query: 149 YKSVL 153
           Y +  
Sbjct: 89  YYAFP 93


>gi|300693529|ref|YP_003749502.1| amino acid ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
 gi|299075566|emb|CBJ34859.1| amino acid ABC transporter, permease protein [Ralstonia
           solanacearum PSI07]
          Length = 261

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +     L+   L++       V S V G+ L++      R           L      L 
Sbjct: 27  YERAALLNAAKLSLLVMLCTVVLSLVCGVGLAVLLISPCRWVAR-------LAQGFVELT 79

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              PTLV +   + +       G  ++   + ++P F ++ I LS + AAF AE +R+G+
Sbjct: 80  RNTPTLVQLCCAFLVVNTLITQGLAHWGLANPLTPLFWAVAI-LSLHKAAFHAEALRAGI 138

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP   +EAA +LG + R+    V LP A R+ +P L +  + L+K SSLA A+   +L
Sbjct: 139 EAVPPAMLEAAASLGFSARERLWRVQLPLAFRAALPSLMNNTVELVKASSLASAIAVGEL 198

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 I  Q    +E +++ +  Y +++  +      L  ++ +
Sbjct: 199 TYSTLMIWTQRDNLLECMVLLLLFYGTVTYAVHAGGVWLEHRLRM 243



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 48/127 (37%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A+L     +  +    ++ + + G  +    +S  + VA + + +VE+ RN P LV +  
Sbjct: 31  ALLNAAKLSLLVMLCTVVLSLVCGVGLAVLLISPCRWVARLAQGFVELTRNTPTLVQLCC 90

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
            +  V +++        L   +      ++  +L         + + +  +  ++     
Sbjct: 91  AFLVVNTLITQGLAHWGLANPLTPLFWAVAILSLHKAAFHAEALRAGIEAVPPAMLEAAA 150

Query: 208 SRHFHEK 214
           S  F  +
Sbjct: 151 SLGFSAR 157


>gi|206580174|ref|YP_002239815.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|262041363|ref|ZP_06014569.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|288936653|ref|YP_003440712.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|290510295|ref|ZP_06549665.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|330007453|ref|ZP_08305952.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|206569232|gb|ACI11008.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|259041286|gb|EEW42351.1| amino acid ABC superfamily ATP binding cassette transporter
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|288891362|gb|ADC59680.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
 gi|289777011|gb|EFD85009.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|328535464|gb|EGF61932.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 213

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 81/227 (35%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++            T   I   +   G+V  L    L R         L ++YIS     
Sbjct: 1   MDAISWQLLIEGAWTTLWISAIAIAFGVVAGLLI-ALVRMLRLPVIDQLLVVYISLARAT 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L T               +    +         + ++  +AL+  T+AF AEI R+   
Sbjct: 60  PLVT-------------LVLFLFLSLPTMGINLDKNVAAIVALTLNTSAFNAEIWRNAFR 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR Q EAA ++G+      R ++LPQ     +P L ++   L+K S     +G  DL 
Sbjct: 107 TFPREQREAAESVGMRRWTYFRYIMLPQMWIESLPALVNEMSFLIKGSPAIAVIGVVDLT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            V   I + T + +  IL    +Y+ +   +         K     +
Sbjct: 167 RVTNRISSVTYEPLSPILAAGLLYVVIIGCLLKLQGIAERKARRLAR 213



 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 40/98 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T W++   +    + G L+   R+    ++  +  VY+ + R  P + ++
Sbjct: 6   WQLLIEGAWTTLWISAIAIAFGVVAGLLIALVRMLRLPVIDQLLVVYISLARATPLVTLV 65

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
            FL+ S+ ++    D ++     + LN    +      
Sbjct: 66  LFLFLSLPTMGINLDKNVAAIVALTLNTSAFNAEIWRN 103


>gi|332040046|gb|EGI76431.1| amino acid ABC transporter permease [Hylemonella gracilis ATCC
           19624]
          Length = 213

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 14/215 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++ +            A     +  +G+V+ L    L R         L   +IS     
Sbjct: 1   MDEQAWRMLFAGAWVTAWTSGLAIAMGVVIGLGL-ALLRMARIPLLDPLLAAWISFARAT 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L TLVL            +  +             ++  +AL+  T+AF AE+ RS   
Sbjct: 60  PLVTLVLFIFLASPKLGLSLNRE-------------IAAVLALTINTSAFNAEVWRSAFR 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
              R Q+EAA+A G+T  +A R ++LPQ   + +P L ++   L+K S     +G  DL 
Sbjct: 107 GFSREQLEAALACGMTRLQAFRRIMLPQMAVTSMPGLINEMTFLVKGSPAIAVIGMVDLT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            V   I   T + +  IL    +Y++L  ++    
Sbjct: 167 RVTNRIAAVTYEPLPPILAAAVLYMALIALMVKLQ 201


>gi|256784800|ref|ZP_05523231.1| glutamate permease [Streptomyces lividans TK24]
          Length = 205

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 21/220 (9%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLV 236
           M   A   V S + G +L+          R     +  T + +PL  I  F   GL   +
Sbjct: 1   MQLAALSAVGSLIWGTILAAMRVGPVPLMRGLGAAYVNTVRNIPLTVIILFASLGLNQTL 60

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
            + L                 G S  +  F    + L  YT+AF+ E +RSG+  VP GQ
Sbjct: 61  GVTLG---------------GGDSFETINFRLAVLGLVLYTSAFVCEALRSGINTVPVGQ 105

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA A+GL+  +  RLV+LPQA RS + PL +  + L+KN+++A A+G A+  ++   +
Sbjct: 106 AEAARAIGLSFGQVLRLVVLPQAFRSTVGPLANVLIALIKNTTVAAAIGVAEAAALMKDM 165

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           I    Q + I  I    ++ L++   L +  +  K+A+K 
Sbjct: 166 IENEAQLLLISAIIAVGFVILTLPTGLILGWVGKKVAVKR 205



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%)

Query: 97  FWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
             LA    + + I GT++ A R+    L+  +   YV   RNIP  V+I F    +   
Sbjct: 1   MQLAALSAVGSLIWGTILAAMRVGPVPLMRGLGAAYVNTVRNIPLTVIILFASLGLNQT 59


>gi|240126635|ref|ZP_04739521.1| Putative ABC transporter, permease protein, amino acid [Neisseria
           gonorrhoeae SK-92-679]
 gi|268685216|ref|ZP_06152078.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-92-679]
 gi|268625500|gb|EEZ57900.1| ABC-type amino acid transport system protein [Neisseria gonorrhoeae
           SK-92-679]
          Length = 222

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 22/213 (10%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +      S VLG +  L     +R             ++  F +  +  + ++   + 
Sbjct: 24  QISLISVAASCVLGTLFGLVLRSRNRLVR----------FVGRFYLETIRIVPILVWLFD 73

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F   V    +  G       F       S +  A + ++VR  L ++ + Q+E+ +A 
Sbjct: 74  LYFGLSVWTGIHIGG-------FWVCVWVFSLWGVAEMGDLVRGALESIEKHQVESGLAP 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT--- 360
           GL+  +  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   
Sbjct: 127 GLSRGQVFRCIELPQSIRRVLPGAVNLFTRMIKTSSLAWLIGVIEVVKVGQQIIENSLLT 186

Query: 361 --GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
               +  +  +   +Y      ++L   +L  K
Sbjct: 187 QPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQK 219



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  ++   +  + ++GTL G    S N+LV ++ R Y+E  R +P LV +F LY  
Sbjct: 18  GLLLTAQISLISVAASCVLGTLFGLVLRSRNRLVRFVGRFYLETIRIVPILVWLFDLYFG 77

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
           +     I      +   +F   
Sbjct: 78  LSVWTGIHIGGFWVCVWVFSLW 99


>gi|315930623|gb|EFV09650.1| L-cystine transport system permease protein TcyB [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 141

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 3/134 (2%)

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P+     I  S YT++ +AEI+R GL ++P+GQ EAA + G         ++LPQ  R 
Sbjct: 5   FPQAFWGTIGFSLYTSSVMAEIIRGGLNSIPKGQFEAAYSQGFGKFFTLFYIILPQTFRK 64

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIIL---IWMFIYLSLSI 379
           IIP L SQ +  +K+++    +G A+L     TI+ +     EI+    +   IY  +  
Sbjct: 65  IIPALLSQIVTTVKDTAYLAGLGIAELTYNSKTILAKLTSFEEILAMIGVVAGIYFIICF 124

Query: 380 MIALFMNRLNAKIA 393
            +++ +     K A
Sbjct: 125 SLSMLVRYYAKKTA 138


>gi|313890259|ref|ZP_07823893.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121364|gb|EFR44469.1| putative glutamine ABC transporter, permease protein GlnP
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 215

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 23/231 (9%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                    LSF    +     I   S +L  +       + R+   K  K L   YI  
Sbjct: 1   MSQLFTAANLSFIFQGLGLTLYISFISIILSTIFGTLL-AIMRNGKNKFVKLLASFYIEF 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             +  +P L+ I + + +   K                   +   A + +T+A +AEI+R
Sbjct: 60  --VRNVPNLLWIFIIFLVFQVK----------------ATPAGITAFTVFTSAALAEIIR 101

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVG 345
            GL  V  GQ EA +A GL   +   L++ PQA R ++P + SQ++ ++K++SL    + 
Sbjct: 102 GGLNGVDNGQTEAGLAQGLRPSQVFLLIVFPQAYRKMLPAIISQFVTVIKDTSLLYSVIA 161

Query: 346 FADLVSVGGTIINQTGQAIEIILIWM---FIYLSLSIMIALFMNRLNAKIA 393
             +L      ++    QA ++  ++     IY  ++  I+    RL  K A
Sbjct: 162 IQELFGKSQILMGNYFQANQVFALYALITLIYFIINFTISSLSRRLAKKWA 212



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 34/64 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G   T +++F  +I +TI GTL+   R   NK V  +   Y+E  RN+P L+ IF +
Sbjct: 13  IFQGLGLTLYISFISIILSTIFGTLLAIMRNGKNKFVKLLASFYIEFVRNVPNLLWIFII 72

Query: 149 YKSV 152
           +   
Sbjct: 73  FLVF 76


>gi|104781003|ref|YP_607501.1| amino acid ABC transporter permease [Pseudomonas entomophila L48]
 gi|95109990|emb|CAK14695.1| putative amino acid ABC transporter, permease protein [Pseudomonas
           entomophila L48]
          Length = 237

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 2/206 (0%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQLH 245
             + ++ FV  +VL L  +             L L + + TF+  G P  + + + Y   
Sbjct: 23  LAMTLWLFVASMVLGLALSLPLALARASRNAWLRLPVQLYTFVFRGTPLYIQLLICYTGL 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           +   V+ +   +             +A    T A+  EI    +  +P G++EAA A GL
Sbjct: 83  YSLQVVREHALLD-QFFRNALNCTLLAFVLNTCAYTVEIFAGAIRNLPAGELEAAQAYGL 141

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE 365
              K    ++LP A+R  +P  +++ + +L  +SLA     AD++ V       T    +
Sbjct: 142 RGWKLNLFLVLPAALRRSLPAYSNELILMLHATSLAFTATVADILKVARDANAATFLTFQ 201

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAK 391
              +   +Y+ LS  +         +
Sbjct: 202 AFGVAALLYMLLSFALVGLFRLAERR 227


>gi|209547731|ref|YP_002279648.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533487|gb|ACI53422.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 219

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 13/179 (7%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
                  +    LY++  ++ G+P L ++ L Y           F   G   V   F + 
Sbjct: 49  RSGLAALRHFAALYVT--VVRGVPLLAVLFLLY-----------FGLPGIGIVFDAFGAA 95

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
              L+   AA IAE+ R+GL A+P GQ EAA+A+GLT  ++ RL++ PQ +R I+ P+  
Sbjct: 96  LAGLALCFAAQIAELFRAGLKAIPAGQGEAALAVGLTPVQSFRLIIFPQVVRVILAPMIV 155

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            ++ LLK+SSLA  +   +LV  G  +  +    ++I +     Y +++   ++   RL
Sbjct: 156 TFVALLKDSSLASLITVNELVLTGRAMATEYFLPLQIYVAVGLCYFAIAWPFSVVSRRL 214


>gi|110679185|ref|YP_682192.1| histidine ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
 gi|109455301|gb|ABG31506.1| histidine ABC transporter, permease protein [Roseobacter
           denitrificans OCh 114]
          Length = 248

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 17/222 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +       +  F L   +++      R F + +           F+  G P  +  
Sbjct: 20  MIWNIYFGVVALICGFFLATAVAVGKASPRRIFRKPS-------EWFIFIFRGSPLFIQF 72

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y L      +           +  ++   I L   TAA+  EI    L ++P+G  E
Sbjct: 73  FFGYFLFLSLKSVSPIF----DPFTAAWLGALIVLFLNTAAYSGEIFYGALQSIPKGDTE 128

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSV 352
           AA A G+T     R V+ P  +R   P  T++ + L   ++L    GF       D +  
Sbjct: 129 AADAYGMTGWPRFRRVIWPTMLRLAWPAYTNEAIFLFHATALVFLSGFPAWQQRGDALYY 188

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                ++T        I    ++ L++++      +NA++  
Sbjct: 189 ASYFADKTFNPFIPYPILAGYFIVLTLIVVGIFGLVNARLNR 230


>gi|210629973|ref|ZP_03296196.1| hypothetical protein COLSTE_00080 [Collinsella stercoris DSM 13279]
 gi|210160724|gb|EEA91695.1| hypothetical protein COLSTE_00080 [Collinsella stercoris DSM 13279]
          Length = 212

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 26/208 (12%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           A   V S +LG VL+L      + +  +  + L   YI  F     P L+ I   Y    
Sbjct: 24  ALSIVCSVILGTVLALV-----KAYGPRPLRWLVSAYIELF--RCTPNLLWILFIYFTVQ 76

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
              +                    +A + +T+A +AEIVR+GL A+P GQ EAA + G  
Sbjct: 77  GLDIFIS----------------TLAFTLFTSAVMAEIVRAGLNAIPAGQFEAAQSQGFG 120

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN---QTGQA 363
                R ++LPQ  ++I P L  Q   ++K+SS    +  A+ +     ++       Q 
Sbjct: 121 FFATMRYIILPQTFKTITPALFGQCTTVIKDSSYLSGINVAEFMYTTNVVMAHAVSLDQV 180

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAK 391
           + +      +Y +L+  I+L + R   +
Sbjct: 181 LMLYGFVFALYFALNFGISLLVRRFQRR 208



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 36/67 (53%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    I+ GFV T  ++   ++ + I+GT++   +    + + W+   Y+E+FR  P L+
Sbjct: 7   TNLVYIMGGFVKTIEISALSIVCSVILGTVLALVKAYGPRPLRWLVSAYIELFRCTPNLL 66

Query: 144 VIFFLYK 150
            I F+Y 
Sbjct: 67  WILFIYF 73


>gi|319762274|ref|YP_004126211.1| polar amino acid abc transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|330825796|ref|YP_004389099.1| polar amino acid ABC transporter inner membrane subunit
           [Alicycliphilus denitrificans K601]
 gi|317116835|gb|ADU99323.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans BC]
 gi|329311168|gb|AEB85583.1| polar amino acid ABC transporter, inner membrane subunit
           [Alicycliphilus denitrificans K601]
          Length = 266

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 16/224 (7%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F  +          L     +        L   L L   RL+R    +        + 
Sbjct: 54  WEFFAWPTTWAFLGRGLLGTLASAAMAAVIALAFGLVLMMGRLARLRLVR--------WP 105

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
           S  +I  L     + L Y      P +              +  L + +   TAA +AE+
Sbjct: 106 SIAVIEFLRGTPTLLLIYVCFLVLPSV--------GIKLSTYWMLTLPIGLATAAVVAEV 157

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R+G++AVPRGQ +AA +LGLT  +   LV+ PQA+R I+P L +Q + ++K+++    V
Sbjct: 158 YRAGVLAVPRGQTDAARSLGLTEAQVFFLVVFPQALRYIVPALVAQLVIVVKDTTFGYVV 217

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
            + +L+     +I      + + L+   +Y  ++  I+    RL
Sbjct: 218 TYGELMQNAKVLIANYHALVPVYLVVAALYCLVNYAISRASKRL 261



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 1/110 (0%)

Query: 60  GIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRL 119
           GI F    AG ++D     + +  +    +  G + T   A    + A   G ++  GRL
Sbjct: 38  GIVFRFHAAG-QLDARFWEFFAWPTTWAFLGRGLLGTLASAAMAAVIALAFGLVLMMGRL 96

Query: 120 SANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           +  +LV W     +E  R  P L++I+  +  + SV        +L   +
Sbjct: 97  ARLRLVRWPSIAVIEFLRGTPTLLLIYVCFLVLPSVGIKLSTYWMLTLPI 146


>gi|330837351|ref|YP_004411992.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Spirochaeta coccoides DSM 17374]
 gi|329749254|gb|AEC02610.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Spirochaeta coccoides DSM 17374]
          Length = 209

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 26/230 (11%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F   + N  +    +T+         SFV G++L L      +    +  + +  
Sbjct: 1   MTSGFFSFDVFNFLMHGLGVTLIIAFVTIALSFVFGMILGLM-----KVAGGRVARVVAT 55

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +YI+                     + P+L        +   P  +S  +A++ +T+A +
Sbjct: 56  VYINAVR------------------NIPLLLFIIGFRFTLRLPALVSAIVAMTVFTSAMV 97

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEIVR GL  +  GQ EAA ALGL   +    ++LPQA++ I+ PL  Q++  +K++S  
Sbjct: 98  AEIVRGGLNGIAAGQWEAAKALGLNKFQMYIYIILPQAVKKILVPLMGQFVTAIKDTSFC 157

Query: 342 VAVGFADLVSVGGTIIN---QTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
             VG  +L+  G  I+    ++   + +  +  FIY  +++M+     R+
Sbjct: 158 WIVGIEELMGAGMIIMGKFVKSSHVLGMYAVIAFIYYMVNVMVNWLSRRV 207



 Score = 39.9 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 30/60 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G   T  +AF  +  + + G ++G  +++  ++   +  VY+   RNIP L+ I   
Sbjct: 14  LMHGLGVTLIIAFVTIALSFVFGMILGLMKVAGGRVARVVATVYINAVRNIPLLLFIIGF 73


>gi|323494402|ref|ZP_08099511.1| ABC-type transport system permease protein [Vibrio brasiliensis LMG
           20546]
 gi|323311332|gb|EGA64487.1| ABC-type transport system permease protein [Vibrio brasiliensis LMG
           20546]
          Length = 255

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 99/247 (40%), Gaps = 5/247 (2%)

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT 205
           +FL     + +      +   +    +    +    T+       +  F LG++L L   
Sbjct: 10  YFLAAGAGAFVLAVIVGLDWQWISKYSGDITTALWKTLLLLISTVICGFALGVLLGL--- 66

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE 265
             ++    K    L   + +      L   + +           + G         +   
Sbjct: 67  --AQLSESKPLAGLATGFCTMIRGTPLLLQLWLLYYGLGSLFPYIPGIRQSWLWPYLIEV 124

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           +   +IAL+   A +  E++R  L  VP+G++EAA ++G++     R + LP+A++ I+P
Sbjct: 125 WPYAFIALTLSFAGYEGEVMRGALKGVPKGELEAAHSMGMSRWLVLRRIWLPRAIQRILP 184

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFM 385
            L  + +  LK + L   + F D+ +V   +  +T    E +++   IYL ++ +I L  
Sbjct: 185 TLNGEVILQLKATPLVATISFVDIFAVFSRVRQETYIIYEPLILLAVIYLIIAGLITLGF 244

Query: 386 NRLNAKI 392
             L  + 
Sbjct: 245 WLLERRY 251



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +   S Y+  I      T  L  S +I    +G L+G  +LS +K +A +   +  + 
Sbjct: 27  LDWQWISKYSGDITTALWKTLLLLISTVICGFALGVLLGLAQLSESKPLAGLATGFCTMI 86

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           R  P L+ ++ LY  + S+ P            +L             + A 
Sbjct: 87  RGTPLLLQLWLLYYGLGSLFPYIPGIRQSWLWPYLIEVWPYAFIALTLSFAG 138


>gi|206579211|ref|YP_002240194.1| putative amino acid ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|290510006|ref|ZP_06549376.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|206568269|gb|ACI10045.1| putative amino acid ABC transporter, permease protein [Klebsiella
           pneumoniae 342]
 gi|289776722|gb|EFD84720.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 229

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 18/208 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +   GI L+  A R         G    LL++   +I G+P   LI + + L +
Sbjct: 36  IGATLLALPGGIALAGLAWRYG-------GLVRRLLFLWAEIIRGIP---LIFVIFWLWY 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P  +++ +AL+ +TAA +   V +GL ++P+GQ EAA+  G  
Sbjct: 86  LLPMLTGGDL-------PGAVTVTLALAWFTAASVMHSVLAGLQSLPKGQYEAALTQGFA 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
             +  RLVLLPQA+R++ P L   ++ LLK++SLA  V   +L +V G + N+     + 
Sbjct: 139 PGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSLAFIVNVPELTTVAGQVNNRVQIYPLA 198

Query: 366 IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           I +    +Y  L   ++L  +R   + A
Sbjct: 199 IFVFTGAVYYLLCCGLSLLASRRFTRRA 226


>gi|160895678|ref|YP_001561260.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160361262|gb|ABX32875.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 242

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 84/224 (37%), Gaps = 9/224 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS-LFATRLSRHFHEKTGKALPLLYISTFL 228
                            A+   F+  L    + L           +  +  PL ++    
Sbjct: 1   MAYQFDFGAVFDYSGLLAQGAGFTLALTAAGAVLGGAIGVAGGVSRAWRIAPLHWLFKVY 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G+     +     + F  P L             E+ +  +       A+I EIVR+G
Sbjct: 61  VEGIRNTPFLVQLMFVFFGLPSL--------GVQINEWQACLLTTVINLGAYITEIVRAG 112

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +    RGQ+EAA ALG+      R V+L  A++ + P L+SQ + ++  +S+   +   D
Sbjct: 113 IQETQRGQLEAAGALGMGRWALFRHVVLRPALQRVWPSLSSQIVIVMLGTSVVSQIAAQD 172

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L      I ++  +A E  L+    Y  L++ +   +  +  + 
Sbjct: 173 LTFAANFIQSRNFRAFETYLVVTAAYFVLALALRQLLAWIGQRF 216


>gi|27378209|ref|NP_769738.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
 gi|27351356|dbj|BAC48363.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
           110]
          Length = 231

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 11/227 (4%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +       S    ++   A  FV   +LG  L+L      +HF       +   YI+   
Sbjct: 10  LQAWPYLWSGLLFSLALTAVAFVVGMILGTCLALL-----QHFEVPVIGKVVRGYIALIR 64

Query: 229 IFGLPTLVLIALKYQLHFDKP-VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
                ++ LI + +   F  P VLG  +  G         + +I    + AA+ +EI+R 
Sbjct: 65  -----SIPLILVLFWFFFLVPIVLGHLSGNGRPIPIGATWTAFITFGLFEAAYYSEIIRV 119

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL AV RGQ EA  AL L+  +  R V+LPQ +R   P + SQ + L +++SL   +   
Sbjct: 120 GLRAVNRGQFEACQALALSTFETYRSVILPQVLRVASPIILSQTIILFQDTSLVYVLSLT 179

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           DL+     +    G+ +E+ L+ + +YL++S   +  +  L  + A+
Sbjct: 180 DLLGAASKLAQLNGRLVEMYLVVVVVYLAISSAASQGVALLRKRYAI 226



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G + +  L     +   I+GT +   +     ++  + R Y+ + R+IP ++V+
Sbjct: 13  WPYLWSGLLFSLALTAVAFVVGMILGTCLALLQHFEVPVIGKVVRGYIALIRSIPLILVL 72

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL--------- 196
           F+ +  V  VL     +             ++F        ++I                
Sbjct: 73  FWFFFLVPIVLGHLSGNGRPIPIGATWTAFITFGLFEAAYYSEIIRVGLRAVNRGQFEAC 132

Query: 197 -GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
             + LS F T  S    +    A P++   T ++F   +LV +     L      L Q N
Sbjct: 133 QALALSTFETYRSVILPQVLRVASPIILSQTIILFQDTSLVYVLSLTDLLGAASKLAQLN 192


>gi|300784268|ref|YP_003764559.1| amino acid ABC transporter permease [Amycolatopsis mediterranei
           U32]
 gi|299793782|gb|ADJ44157.1| permease component of ABC-type amino acid transport system
           [Amycolatopsis mediterranei U32]
          Length = 215

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 13/223 (5%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
             L        T  ++FV S V  +V       L R       +A+   Y++      L 
Sbjct: 6   NNLDLFGPFFLTTIELFVLSAVGALVWGTILAML-RVSPVPVFRAVGTAYVTIARNTPLT 64

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            +    +     F  P+L              F +  +AL+ YT+AFI E+VRSG+  VP
Sbjct: 65  LVFAFFV-----FAYPLLD-------IVKLDYFPAAVVALTVYTSAFICEVVRSGINTVP 112

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EA  ALGLT  +    V+LPQA+RS++PPL S  + LLKN+++A     A+  ++ 
Sbjct: 113 VGQAEAGRALGLTFGQILGQVVLPQALRSVVPPLISTLIALLKNTTIAAGFSVAEAGAIR 172

Query: 354 GTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +  +    +  +L     ++ L  +++     L  + ++  
Sbjct: 173 AYLSERGESQLVGLLWVALGFIILVAVLSFVQRSLEKRWSVAR 215



 Score = 41.1 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           F+ T  L     + A + GT++   R+S   +   +   YV + RN P  +V  F   + 
Sbjct: 15  FLTTIELFVLSAVGALVWGTILAMLRVSPVPVFRAVGTAYVTIARNTPLTLVFAFFVFAY 74

Query: 153 LSVLP 157
             +  
Sbjct: 75  PLLDI 79


>gi|152969144|ref|YP_001334253.1| putative binding-protein-dependent transport systems inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238893600|ref|YP_002918334.1| putative binding-protein-dependent transport system inner membrane
           component [Klebsiella pneumoniae NTUH-K2044]
 gi|150953993|gb|ABR76023.1| putative binding-protein-dependent transport systems inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238545916|dbj|BAH62267.1| putative binding-protein-dependent transport system inner membrane
           component [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 213

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 82/227 (36%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           ++            T   I   +   G+V  L    L R         L ++YIS     
Sbjct: 1   MDAISWQLLIEGAWTTLWISAIAIAFGVVAGLLI-ALVRMLRLPVIDQLLVVYISLARAT 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L T               +    +         + ++  +AL+  T+AF AEI R+   
Sbjct: 60  PLVT-------------LVLFLFLSLPTMGINLDKNVAAIVALTLNTSAFNAEIWRNAFR 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR Q EAA ++G+      R ++LPQ     +P L ++   L+K S     +G  DL 
Sbjct: 107 TFPREQREAAESVGMRRWTYFRYIMLPQMWIESLPALVNEMSFLIKGSPAIAVIGVVDLT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            V   I + T + +  IL    +Y+++   +         K     +
Sbjct: 167 RVTNRISSVTYEPLSPILAAGLLYVAIIGCLLKLQGIAERKARRLAR 213



 Score = 36.1 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 40/98 (40%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              ++ G   T W++   +    + G L+   R+    ++  +  VY+ + R  P + ++
Sbjct: 6   WQLLIEGAWTTLWISAIAIAFGVVAGLLIALVRMLRLPVIDQLLVVYISLARATPLVTLV 65

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTM 183
            FL+ S+ ++    D ++     + LN    +      
Sbjct: 66  LFLFLSLPTMGINLDKNVAAIVALTLNTSAFNAEIWRN 103


>gi|126739645|ref|ZP_01755337.1| ABC transporter, membrane spanning protein (amino acid)
           [Roseobacter sp. SK209-2-6]
 gi|126719291|gb|EBA16001.1| ABC transporter, membrane spanning protein (amino acid)
           [Roseobacter sp. SK209-2-6]
          Length = 209

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            R L           ++   + +LGI+++L    L R         +   ++        
Sbjct: 1   MRDLPDLIEAGLLTLQVASLAMILGILIALGL-ALIRLNMRGPLNWIATTWVEFARNTPA 59

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
                          +     F           +  +   L+   A ++AE  R G  A+
Sbjct: 60  LF-------------QLFFFGFGLGAFGLHLSPYAIVLAGLTFNCAGYLAENFRGGFQAI 106

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P  QM AA +LG+T  +A   +++PQ +R +  P+T+Q +  +  SSL + VGF +L   
Sbjct: 107 PETQMRAARSLGMTATQAYLRIVIPQVLRIVYHPVTNQMVWAVLMSSLGMLVGFRELSGE 166

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
                ++T +  E   +   IY  +  +I      L +++
Sbjct: 167 TQFFASRTFRIFEYFAVTAVIYYVIVKIILGASRLLASRL 206


>gi|222152717|ref|YP_002561893.1| amino acid ABC transporter permease [Streptococcus uberis 0140J]
 gi|222113529|emb|CAR41315.1| putative amino acid ABC transporter, permease protein
           [Streptococcus uberis 0140J]
          Length = 215

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 23/231 (9%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
                    LSF    +     I + S VL  +   F   + R+      K +  +YI  
Sbjct: 1   MAQLFTPSNLSFILEGLGLTLYISLISIVLSTIFGTFL-AIMRNGKNTFLKLVASIYIEF 59

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                               + P L     I          +   A + +T+A +AEI+R
Sbjct: 60  VR------------------NVPNLLWIFIIFLVFQMKSTPAGITAFTVFTSAALAEIIR 101

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA-VAVG 345
            GL  V  GQ EA +A G +  +   L++ PQA R ++P + SQ++ ++K++SL    + 
Sbjct: 102 GGLNGVDAGQTEAGLAQGFSASQVFLLIVFPQAYRKMLPAIISQFVTVIKDTSLLYSVIA 161

Query: 346 FADLVSVGGTIINQTGQA---IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             +L      ++ +  QA     +  +  FIY  ++ +I+    RL  K A
Sbjct: 162 IQELFGKSQILMGKYFQAEQVFALYALITFIYFVINFIISSLSRRLAKKWA 212



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 35/71 (49%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S  + IL G   T +++   ++ +TI GT +   R   N  +  +  +Y+E  RN+P 
Sbjct: 6   TPSNLSFILEGLGLTLYISLISIVLSTIFGTFLAIMRNGKNTFLKLVASIYIEFVRNVPN 65

Query: 142 LVVIFFLYKSV 152
           L+ IF ++   
Sbjct: 66  LLWIFIIFLVF 76


>gi|241203419|ref|YP_002974515.1| polar amino acid ABC transcriptional regulator inner membrane
           protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857309|gb|ACS54976.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 235

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 92/213 (43%), Gaps = 10/213 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   + ++G +L+L  T   R         L  LY+S      +   + +A  Y 
Sbjct: 15  PLTLAITFTAMIVGFLLALITTTF-RVRRIPVVSQLADLYVSYARSVPVVLQLFVAF-YG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L     +    +F+  +      ++  + LS Y   +++E++R   +AV RGQ +AA +L
Sbjct: 73  LPLVVALFEVEDFVSPN------VAAIVGLSLYHGGYLSEVLRPAYLAVERGQHDAADSL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-- 361
           G T  +    V+ PQA+   +P   +  + L+ N +L + +G AD+++    ++ +    
Sbjct: 127 GYTFLQKILRVVGPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMERDYNQ 186

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              E  L+   IY  L ++  + +     + A 
Sbjct: 187 YQFETYLVLAVIYSLLCLVAWIVVRFFETRNAR 219


>gi|295394799|ref|ZP_06805014.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972395|gb|EFG48255.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Brevibacterium mcbrellneri ATCC 49030]
          Length = 220

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 13/232 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
                +    LS    T+       V   VLG +L+       R       +A   +YI+
Sbjct: 1   MDFADIVMLFLSGVWGTVKLFGVTLVGCLVLGSILAAM-----RVSPTPVLRAAASVYIT 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
           T     L TLV+    + L F        + I        F+   +AL  YT+ F+AE++
Sbjct: 56  TVRNTPL-TLVMFFCVFGLPFLDIRASHDSAIN------SFVLACVALIAYTSCFVAEVL 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  +P GQ EAA A+GL   +  R V++PQA R++IPPL S  + +LKN+S+A A  
Sbjct: 109 RSGISTIPVGQAEAARAIGLNFGQTLRYVIMPQAFRTVIPPLGSVIIAMLKNTSIASAFN 168

Query: 346 FADLVSVGGTIINQTGQ-AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +++S     I   G   + +I      YL L++++      L  K  +  
Sbjct: 169 NREIISAMRNAIEMRGDITLLVIAGAAVSYLILALILGRVFTILENKWVIHR 220



 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 44/109 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  L    ++   ++G+++ A R+S   ++     VY+   RN P  +V+FF 
Sbjct: 10  FLSGVWGTVKLFGVTLVGCLVLGSILAAMRVSPTPVLRAAASVYITTVRNTPLTLVMFFC 69

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
              +  +     H   +   +      +++ +  +    +  + +  +G
Sbjct: 70  VFGLPFLDIRASHDSAINSFVLACVALIAYTSCFVAEVLRSGISTIPVG 118


>gi|190891652|ref|YP_001978194.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
 gi|190696931|gb|ACE91016.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 652]
          Length = 375

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 9/187 (4%)

Query: 214 KTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
           +  +   L  I T+ I  + ++ LI + Y +    PVL             +     I  
Sbjct: 195 RQSRLSSLRIICTWYIEVMRSVPLILVVYWIWILMPVLAP------QWELADVARGMIGF 248

Query: 274 SCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLN 333
           + + +A++AE VRSGL AVPR Q  AA +LG++     R ++LPQA+R ++ PL    L+
Sbjct: 249 TIFYSAYVAEYVRSGLQAVPRAQTAAARSLGISEFDINRSIVLPQALRVVVAPLVGNVLD 308

Query: 334 LLKNSSLAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +  ++ L   +G  D +  G  I+       +  E++   +  Y  +  MI     +L  
Sbjct: 309 IFNSAPLVFIIGLTDFLRAGQMILANPQYGDRTFEVLSFLLVTYFLVGSMITYAARKLED 368

Query: 391 KIALKEK 397
            +A   +
Sbjct: 369 HMATSAR 375



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 29/49 (59%)

Query: 110 IGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           IG L+  GR S    +  IC  Y+EV R++P ++V+++++  +  + P 
Sbjct: 187 IGILLAFGRQSRLSSLRIICTWYIEVMRSVPLILVVYWIWILMPVLAPQ 235


>gi|257461203|ref|ZP_05626301.1| SugE protein [Campylobacter gracilis RM3268]
 gi|257441577|gb|EEV16722.1| SugE protein [Campylobacter gracilis RM3268]
          Length = 218

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 90/223 (40%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+         S  LG+VL +      R  +         L I   ++  +P +
Sbjct: 13  LEGLGVTLQIALISIAVSLALGLVLGILMASGRRALYIP-------LKICLEIVRIMPPI 65

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V + + Y        +   N            +  I  S +    + ++VR  ++++P+ 
Sbjct: 66  VWLFIVYFGASKAFGIHISNI----------AASIIVFSVWGVFEMMDLVRGAVLSIPKH 115

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+A AL  +  +    V+LP AMR ++P   + +  ++K +S+AV +G  +LV VG  
Sbjct: 116 QFESAEALAFSRSQIYLYVILPLAMRRLVPATINLFSRMIKTTSIAVLIGVIELVKVGQQ 175

Query: 356 IIN-----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II           + I     F+Y  +   I+    +L  + +
Sbjct: 176 IIEVNVFRDNYAPLIIYGAIFFVYFLICYPISALSKKLENRWS 218


>gi|148925847|ref|ZP_01809534.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145844833|gb|EDK21937.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 224

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)

Query: 223 YISTFLIFGL---PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           YI  F   GL     + L+   + ++F  P    ++            +  I  S +   
Sbjct: 54  YIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDL-------SSVSAAIIVFSIWGCF 106

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + ++VR  L ++P+ Q E+A +LGL   ++   V++PQAMR + P   +    ++K+++
Sbjct: 107 EMMDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNLLTRMIKSTT 166

Query: 340 LAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A  +G  +LV VG  II            I  +  FI+  L   I L+  +L  K +
Sbjct: 167 FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS 224


>gi|325964014|ref|YP_004241920.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470101|gb|ADX73786.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 279

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 84/151 (55%), Gaps = 2/151 (1%)

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV+    F+     +  F+++   L  Y +A  AEI+R+G+ ++P+GQ EA +A+GLT
Sbjct: 111 GMPVVLMMLFVLLGFGTSPFVAVVTGLVLYNSAVFAEIIRAGIQSLPKGQREAGLAIGLT 170

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAI 364
             K+  L+ LPQA+R ++P L +Q + LLK++SL   V + +L+     + +   T    
Sbjct: 171 SFKSRMLIELPQAIRRMMPSLVAQMVVLLKDTSLGYIVAYGELLRAVQVMADFLGTQFLF 230

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            I  +   IY++++I+++     +  + + K
Sbjct: 231 PIFFVAAAIYIAINILVSRIAVWIERRGSRK 261


>gi|254510177|ref|ZP_05122244.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221533888|gb|EEE36876.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 268

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 82/222 (36%), Gaps = 17/222 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +       +  F L   L++      +    K  +     +I  F    L      
Sbjct: 40  MIWNIYFGVMAMIIGFFLATALAV-----GKASANKWLRKPSEWFIFLFRGSPLFIQFFF 94

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           A  + L   KP      F      +  ++   I L   T+A+  EI    L ++P+G +E
Sbjct: 95  AYFFFLSLKKPYPMFDAF------TSAWLGALIVLFLNTSAYAGEIFYGALRSIPKGDIE 148

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSV 352
           AA A G+T     R ++ P  +R   P  T++ + + ++++L     F       D +  
Sbjct: 149 AADAYGMTGWSRFRRIIWPTMLRLAWPAYTNEAIFVFQSTTLVFFSAFPAWQQRGDALYY 208

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                ++T        I  F ++ L+++I     R+N ++  
Sbjct: 209 ASYFADKTFNPFVPYPILAFYFILLTLVIVWGFGRINKRLNR 250


>gi|213966203|ref|ZP_03394388.1| glutamate ABC transport system, permease protein [Corynebacterium
           amycolatum SK46]
 gi|213951138|gb|EEB62535.1| glutamate ABC transport system, permease protein [Corynebacterium
           amycolatum SK46]
          Length = 220

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 8/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L    +T+       + S + G +L+       R       + L   YI+     
Sbjct: 1   MGPELLPAFWVTIKLTIASAIGSLIFGTLLTAM-----RVSPVGILRTLSTWYINIVRNT 55

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  +VL+A     +    +L   N      V   F    +A   YT+ F+AE +R+G+ 
Sbjct: 56  PLTLIVLLASMGLYYNLGLLLAAEN--DSFIVKQNFRLAVLAFVAYTSCFVAESLRAGIN 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP GQ EAA +LGL+  ++ R ++ PQA R  I PL +  + L KN+++A  +G A+  
Sbjct: 114 TVPFGQAEAARSLGLSFGQSFRYIIFPQAFRGAIVPLGNTLIALTKNTTIASVIGVAEAS 173

Query: 351 SVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +  T+        + I  I    ++ L++   LF      + A+K 
Sbjct: 174 LLMKTMTENYASDILIIFGIIAIGFIILTLPTGLFFGWAGKRWAVKR 220



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 37/86 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L  +  I + I GTL+ A R+S   ++  +   Y+ + RN P  +++   
Sbjct: 5   LLPAFWVTIKLTIASAIGSLIFGTLLTAMRVSPVGILRTLSTWYINIVRNTPLTLIVLLA 64

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNR 174
              +   L +   +    F +  N R
Sbjct: 65  SMGLYYNLGLLLAAENDSFIVKQNFR 90


>gi|332107599|gb|EGJ08823.1| polar amino acid ABC transporter inner membrane subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 231

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             + ++ L +  +F  P++   +        P  +S+  ALS    A++A  V +G+  V
Sbjct: 70  RAIPVLMLIFWTYFLLPIVFGVDV-------PGVLSVMAALSLVGGAYLAHAVAAGIRGV 122

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ  A +ALG T   A R V+LPQA+R ++P   +Q++ L+K+SSLA  VG  +L  +
Sbjct: 123 GAGQWAAGLALGFTRWGALRHVVLPQALRMMLPSFVNQWVTLIKDSSLAYIVGVGELSFL 182

Query: 353 GGTIINQTG-QAIEIILIWMFIYLSLSIMIAL 383
              +  +      E+ L    +Y  L   +  
Sbjct: 183 ATQVNARVMVHPTEVFLFVGAVYWLLCSALDW 214


>gi|152965464|ref|YP_001361248.1| polar amino acid ABC transporter inner membrane protein
           [Kineococcus radiotolerans SRS30216]
 gi|151359981|gb|ABS02984.1| polar amino acid ABC transporter, inner membrane subunit
           [Kineococcus radiotolerans SRS30216]
          Length = 224

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 13/217 (5%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+       + S VLG VL++F     R       +A    Y++ F    L  +++  
Sbjct: 16  WGTVTLFFWATLGSLVLGTVLAVF-----RISPSAALRAFGTTYVNVFRNTPLTLIMVFC 70

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           +        P L        +     +    +AL  YT+ F+ E VRSG+  VP GQ EA
Sbjct: 71  V-----LCLPTLQITFSDDTARQYRAY--AILALVAYTSCFVCEAVRSGINTVPLGQAEA 123

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A A+GL      RLV+LPQA R+++PPL S    LLKN+S+A A    +LVS    ++ Q
Sbjct: 124 ARAIGLPFTGVLRLVVLPQAFRAVVPPLGSVLNALLKNTSVASAASNYELVSAMRNLVEQ 183

Query: 360 TGQAIEIILI-WMFIYLSLSIMIALFMNRLNAKIALK 395
            G A+  +LI     Y+ L+ ++   +  L  + A  
Sbjct: 184 NGNAVIAVLIGITVAYMLLAGVLFTGVTLLERRTARS 220



 Score = 43.4 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
                 G   T  L F   + + ++GT++   R+S +  +      YV VFRN P  +++
Sbjct: 8   LDVFGRGIWGTVTLFFWATLGSLVLGTVLAVFRISPSAALRAFGTTYVNVFRNTPLTLIM 67

Query: 146 FFLYKSVLSVLPIPDHSIVLPF 167
            F    + ++           +
Sbjct: 68  VFCVLCLPTLQITFSDDTARQY 89


>gi|163747481|ref|ZP_02154832.1| putative amino acid ABC transporter permease protein [Oceanibulbus
           indolifex HEL-45]
 gi|161379237|gb|EDQ03655.1| putative amino acid ABC transporter permease protein [Oceanibulbus
           indolifex HEL-45]
          Length = 221

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 90/232 (38%), Gaps = 15/232 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
                F      R             +I + S ++G+ +++    ++R    +  +A   
Sbjct: 1   MGNYTFQWRQAFRAFPEMLEGALVTLQISILSMLIGVTIAVLL-AVARDSKTRWLRAPAT 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            ++             +   Y  HF     G +           + +L   ++   A ++
Sbjct: 60  AWVEVARNTPA-----LFQIYMAHFGLGSFGIY--------LSPYAALLAGIAFNNAGYL 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            E  R  + A+P  Q+ A  +LG+   KA RL+++PQ  R    P T+Q +  +  +SL 
Sbjct: 107 CETFRGAMRAIPGTQLRAGRSLGMGQAKAFRLIIVPQMFRISFLPTTNQMIWAILMTSLG 166

Query: 342 VAVGF-ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V VG  +DL  V   +  ++ +  E   +   IY  ++  + L    L A++
Sbjct: 167 VTVGLNSDLAGVTQDLNARSFRTFEFFALAAVIYYVIAKAVMLGARLLAARL 218



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 34/85 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  ++   M+    I  L+   R S  + +      +VEV RN P L  I+  
Sbjct: 18  MLEGALVTLQISILSMLIGVTIAVLLAVARDSKTRWLRAPATAWVEVARNTPALFQIYMA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  + S          L  G+  NN
Sbjct: 78  HFGLGSFGIYLSPYAALLAGIAFNN 102


>gi|258646474|ref|ZP_05733943.1| putative amino-acid permease protein YxeN [Dialister invisus DSM
           15470]
 gi|260403882|gb|EEW97429.1| putative amino-acid permease protein YxeN [Dialister invisus DSM
           15470]
          Length = 234

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 8/211 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +   S   GI+   F   L R  +         +++S F    +P +V + + Y    
Sbjct: 22  LFMAFVSIFFGILFGSFIAVL-RLGNNMFINIFFAVFVSFF--RAVPGIVQLFIVYY-SL 77

Query: 247 DKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
              +   F+   G+ V P     + S+Y+    Y  A+ +E +R  L +V  GQ EAA+A
Sbjct: 78  PYLLAPVFSAFSGTEVKPFDVSPYWSVYLCFILYNTAYQSENIRGALRSVDHGQYEAAVA 137

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +G+T  +A   ++LPQA    +P   + YL  +K  +L   V   D+ +          +
Sbjct: 138 MGMTSFRAFTRIVLPQAFVVALPAFFTYYLKTIKLLALVFTVKVVDMFAKADIFSALYNR 197

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +E  +     Y  L+I++    +R   K+ 
Sbjct: 198 RMEPYIADAIAYWGLAILLTFLFDRWEKKLR 228


>gi|256847114|ref|ZP_05552560.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256715778|gb|EEU30753.1| ectoine/hydroxyectoine ABC transporter, permease EhuC
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 225

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 18/213 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T+  I V S ++  ++      L R    +  + +  LY+  F I  +PT+VL+ L Y 
Sbjct: 23  WTSVWIAVVSLLI-GLVLGTVLGLLRTMKNRLIRFVLWLYLEFFRI--VPTIVLLFLVYY 79

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           +     +  QF         P      +A + + AA  ++IVR  L +VP+ Q E+ +AL
Sbjct: 80  I-----LPRQF-----KIDLPATWMAVLAFALWVAAEFSDIVRGALESVPKHQRESGLAL 129

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R VLLPQA +  +P   +    ++K +SL + +   D+++VG  II    Q 
Sbjct: 130 GLSSCQLFRYVLLPQAFQLELPVTINLATRVIKTTSLLMTISIMDVINVGQQIIEANNQT 189

Query: 364 -----IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                  +  +   +Y  +   ++L+  RL AK
Sbjct: 190 HPTGVFWVYGLIFILYFVVDYPLSLWAKRLTAK 222


>gi|330432866|gb|AEC17925.1| glutamine ABC transporter permease protein [Gallibacterium anatis
           UMN179]
          Length = 220

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 34/236 (14%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA---TRLSRHF---HEKTGKALP 220
           F +    R L    LT+  +     FS + G ++ +      RL R+F   + +  +  P
Sbjct: 7   FSLTNLWRLLEGLGLTIYISFVAIFFSAIFGTLMGIAMTSKNRLIRYFCQIYLEIVRVTP 66

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           LL +     FG      +A  + LH +  ++  F FI                  +  A 
Sbjct: 67  LLALLFVSYFG------LAKWFNLHLNSELVCIFVFI-----------------FWGTAE 103

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + ++VR  + ++ R Q E+A+ALGL+  +  R +LLP +++  +PP+ + +  ++K SSL
Sbjct: 104 MGDLVRGAITSIDRHQSESALALGLSKAQTFRYILLPLSVKRALPPVINLFTRMVKTSSL 163

Query: 341 AVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           A+ +G  +++ VG  II  +  A+      I  + M +Y  +   ++ F  RL  K
Sbjct: 164 AMLIGTLEVIKVGQQIIETSLFAMPTASFWIYGLIMLMYFVICYPLSWFAGRLEKK 219



 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 46/90 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L G   T +++F  +  + I GTL+G    S N+L+ + C++Y+E+ R  P L 
Sbjct: 10  TNLWRLLEGLGLTIYISFVAIFFSAIFGTLMGIAMTSKNRLIRYFCQIYLEIVRVTPLLA 69

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           ++F  Y  +     +  +S ++   +F+  
Sbjct: 70  LLFVSYFGLAKWFNLHLNSELVCIFVFIFW 99


>gi|257125146|ref|YP_003163260.1| polar amino acid ABC transporter inner membrane protein
           [Leptotrichia buccalis C-1013-b]
 gi|257049085|gb|ACV38269.1| polar amino acid ABC transporter, inner membrane subunit
           [Leptotrichia buccalis C-1013-b]
          Length = 219

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 82/176 (46%), Gaps = 6/176 (3%)

Query: 224 ISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGS-----TVSPEFMSLYIALSCYT 277
            +  L + +P +  +   Y +L  + P++ Q  F+             ++   + LS   
Sbjct: 38  CALILYYKVPVIKQVVEIYIELSRNTPLVIQLFFLYFGLPKIGITFNSYICAVLGLSFLG 97

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            +++ E  RSGL +V +GQ E+ +++GLT  +    V+LPQA     P + +  + LLK 
Sbjct: 98  GSYMCEAFRSGLESVTKGQRESGLSIGLTESQLITNVILPQAFTVSFPAIAANIIFLLKE 157

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +S+   +   +L+ +   +I    +  E + + +  YL + + ++  +  +  +I 
Sbjct: 158 TSVIGILALMELMYLTRDLIGLYYKTNESLFMLVAAYLIIILPVSFILTVIERRIR 213


>gi|329121397|ref|ZP_08250022.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Dialister micraerophilus DSM 19965]
 gi|327469687|gb|EGF15154.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Dialister micraerophilus DSM 19965]
          Length = 229

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 90/212 (42%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   I + S     +L LF   +       T K   +  +S F +  +  +  + L +  
Sbjct: 24  TTLTISLLSVAGSCILGLFVGLIM------TLKNPFIQLLSKFYLEFMRIMPQLVLLFIA 77

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F        +  G       F++       +  A + ++VRS + ++P  Q E+A ALG
Sbjct: 78  YFGIAKAFNIHISG-------FIASLTVFILWGTAEMGDLVRSAVESIPENQYESAAALG 130

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-- 362
            +  +  R +++PQA+  ++PP  + +  ++K +SL V +G  +++  G  +I       
Sbjct: 131 FSKFQMYRFIIIPQAVGFLLPPAINLFTRIIKTTSLVVMIGVVEVLKTGQQLIEANRYTA 190

Query: 363 ---AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              A+ +  +  F+Y      ++   + L  K
Sbjct: 191 PDAALPMYGLIFFLYFFSCWPLSKLSSYLEKK 222



 Score = 40.3 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   +  + I+G  VG      N  +  + + Y+E  R +P LV++F  
Sbjct: 18  LLQGLGTTLTISLLSVAGSCILGLFVGLIMTLKNPFIQLLSKFYLEFMRIMPQLVLLFIA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     I     +    +F+  
Sbjct: 78  YFGIAKAFNIHISGFIASLTVFILW 102


>gi|116250817|ref|YP_766655.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115255465|emb|CAK06541.1| putative transmembrane component of ABC transporter [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 235

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 10/212 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   + + G +L+L AT   R         L  LY+S      +   + +A  Y 
Sbjct: 15  PLTLAITFTAMIAGFLLALIATTF-RVRRIPVVSQLADLYVSYARSVPVVLQLFVAF-YG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L     +    +F+  +      ++  + LS Y   +++E++R   +AV RGQ +AA +L
Sbjct: 73  LPLVVALFEVEDFVSPN------VAAIVGLSLYHGGYLSEVLRPAYLAVERGQHDAADSL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-- 361
           G T  +    V+ PQA+   +P   +  + L+ N +L + +G AD+++    ++ +    
Sbjct: 127 GYTFLQKILRVVGPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMERDYNQ 186

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              E  L+   IY  L ++  + +     + A
Sbjct: 187 YQFETYLVLAVIYSLLCLLAWIVVRFFETRNA 218


>gi|238063457|ref|ZP_04608166.1| ABC amino acid transporter permease component [Micromonospora sp.
           ATCC 39149]
 gi|237885268|gb|EEP74096.1| ABC amino acid transporter permease component [Micromonospora sp.
           ATCC 39149]
          Length = 218

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 30/231 (12%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYIS 225
                   T T+       V S VLG +L           R S   +    +  PL  + 
Sbjct: 12  WTLYRDGFTNTVQLFLIAAVGSLVLGTLLGAMRVSPVPALRASGATYVNIVRNTPLTLVF 71

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
            FL+FG+P L                              F S  IAL+ YTAAF+ E++
Sbjct: 72  AFLVFGVPKL------------------------DVNIDYFDSACIALTVYTAAFVCEVI 107

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  V  GQ EAA ALG+T  +   L++LPQA+R+++PP+ S ++ +LKN+++A    
Sbjct: 108 RSGVNTVGTGQAEAARALGMTFAQVLTLIVLPQALRAMVPPMMSVFIAMLKNTTIAAGFS 167

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +  ++   +  +      ++L     +L L + +      L  K  +  
Sbjct: 168 VLEAGAIPSYMSERGEPQFAVLLWITIGFLILILPLVALQRFLERKWRVAR 218



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 33/73 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF NT  L     + + ++GTL+GA R+S    +      YV + RN P  +V  FL   
Sbjct: 18  GFTNTVQLFLIAAVGSLVLGTLLGAMRVSPVPALRASGATYVNIVRNTPLTLVFAFLVFG 77

Query: 152 VLSVLPIPDHSIV 164
           V  +    D+   
Sbjct: 78  VPKLDVNIDYFDS 90


>gi|218462905|ref|ZP_03502996.1| nopaline ABC transporter, permease protein [Rhizobium etli Kim 5]
          Length = 136

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 63/126 (50%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              AL+   + + AEI R  + AV  GQ EAA ALGL++ +   L+++PQ +   +P   
Sbjct: 6   GVAALTVVFSGYAAEIFRGAINAVAPGQREAAAALGLSNAQIWFLIIIPQMIPIALPAFC 65

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
           +  ++L+K++SL   VG  D++ V           +   L    IYL+L+ +  L    L
Sbjct: 66  NLCISLIKDTSLISVVGLTDVMRVAYIGAGSLRAPLPFYLAASAIYLALTSLSLLSFRLL 125

Query: 389 NAKIAL 394
             + +L
Sbjct: 126 ERRYSL 131


>gi|254781113|ref|YP_003065526.1| amino acid ABC transporter (permease) [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040790|gb|ACT57586.1| amino acid ABC transporter (permease) [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 226

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 103/205 (50%), Gaps = 13/205 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               I   SFV+ +++  F   +   F +     +   Y+  F   G P LV + + +  
Sbjct: 23  VTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIF--RGTPLLVQLFVIFY- 79

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                            V   F+++ I+L+   +A+I+EI+RS +I++P+GQ +A+ A+G
Sbjct: 80  ----------GLPHIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIG 129

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT ++  R ++LPQ + +   PL+S+++++LK++S+A  +   ++      I++ T Q +
Sbjct: 130 LTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIPEIFQTAQRIVSTTYQPL 189

Query: 365 EIILIWMFIYLSLSIMIALFMNRLN 389
            I     F+YL L+    +   ++ 
Sbjct: 190 IIYCELAFVYLILTSFCYIIQIKIE 214



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 1/92 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-LSANKLVAWICRVYVEVFRNIPP 141
            S+   +    V T  +A    + + IIG  +   R   ++ +++ I   YV +FR  P 
Sbjct: 11  DSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPL 70

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           LV +F ++  +  +  + D  + +   + LN 
Sbjct: 71  LVQLFVIFYGLPHIGIVFDSFVAIIISLTLNF 102


>gi|298717478|ref|YP_003730120.1| ABC transport system permease [Pantoea vagans C9-1]
 gi|298361667|gb|ADI78448.1| Putative ABC transport system, permease protein [Pantoea vagans
           C9-1]
          Length = 229

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 10/217 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   + ++G  L+L AT   R         L  LY+S      +P ++ + + + 
Sbjct: 10  PLTLGIMFVAMIVGFFLALIATFF-RVRRIPVISQLADLYVS--YARSVPVVLQLFVAF- 65

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++   +  G S      ++  I LS Y   +++E++R   +AV RGQ +A  +L
Sbjct: 66  --YGMPLIT--DNFGFSDFFTANVAAMIGLSLYHGGYLSEVMRPAYLAVERGQHDATDSL 121

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-- 361
           G + R+    V+ PQA+   +P   +  + L+ N +L + +G AD+++    I+ +    
Sbjct: 122 GYSFRQKMLRVIGPQAVHFALPGYGNAIIYLIHNVALVMYIGAADVMATAHLIMERDYNQ 181

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 L+   +Y  L  +  L +     + A    K
Sbjct: 182 YQFGTYLVLAVLYSLLCGVAWLVIRFFEQRHAKYSSK 218



 Score = 36.1 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  + F  MI    +  +    R+    +++ +  +YV   R++P ++ +F  
Sbjct: 5   LLSALPLTLGIMFVAMIVGFFLALIATFFRVRRIPVISQLADLYVSYARSVPVVLQLFVA 64

Query: 149 YKSVLSV 155
           +  +  +
Sbjct: 65  FYGMPLI 71


>gi|227892709|ref|ZP_04010514.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ultunensis DSM 16047]
 gi|227865486|gb|EEJ72907.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus ultunensis DSM 16047]
          Length = 224

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  +        + + T+  I   S V+G+++      L R    K  + +  +Y+  F 
Sbjct: 8   VLFSGSNFDRLLVGLWTSIWIAALSIVIGLLIGTVFGVL-RTMPNKIIRCILRVYMEIFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I     L+     Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  ILPSVVLL-----YLVYYILPRSLHINW-------PGTWMAVLAFSLWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP  Q E+ +ALGL   +    VLLPQA +  +P   +    ++K +S+ + +   D
Sbjct: 115 LQSVPLAQKESGLALGLNKTQLFLYVLLPQAFKLELPATINLATRVIKTTSILMLISVMD 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           +++VG  II    Q        +  +  F Y  L   ++++   L AK
Sbjct: 175 VINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILDYPLSVWAKSLMAK 222



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 46/97 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +      S    +LVG   + W+A   ++   +IGT+ G  R   NK++  I RVY+E+F
Sbjct: 6   INVLFSGSNFDRLLVGLWTSIWIAALSIVIGLLIGTVFGVLRTMPNKIIRCILRVYMEIF 65

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R +P +V+++ +Y  +   L I      +    F   
Sbjct: 66  RILPSVVLLYLVYYILPRSLHINWPGTWMAVLAFSLW 102


>gi|326384496|ref|ZP_08206176.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326196841|gb|EGD54035.1| polar amino acid ABC transporter inner membrane subunit [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 227

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 8/234 (3%)

Query: 164 VLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY 223
           +      +  +       T+       + + + G++L+       +       +     Y
Sbjct: 1   MYELWQSMGPQIWPAFWTTIKLTFYSAIGALLWGVLLAAM-----KVSPVPVMRGFATAY 55

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
           ++      L  +VL        +    L           +  F    +A   YTA F+ E
Sbjct: 56  VNIVRNTPLTLIVLFCSI--GLYQNLGLTLAPENSSFIATNNFRLAVLAFILYTATFVCE 113

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
            +RSG   VP GQ EAA +LGL+  +   L++LPQA+R++I PL S  + L KN+++A  
Sbjct: 114 TLRSGFNTVPIGQAEAARSLGLSFTQVFGLIVLPQALRTVIAPLGSVLIALTKNTTIASV 173

Query: 344 VGFADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +G A+   +  + +   G Q + I  I    ++ +++           + A+K 
Sbjct: 174 IGVAEASLLMKSELETHGDQIMLIFAIIAVGFMIITLAEGAVFGWAAKRWAVKR 227



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 33/89 (37%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           Y    S    I   F  T  L F   I A + G L+ A ++S   ++      YV + RN
Sbjct: 2   YELWQSMGPQIWPAFWTTIKLTFYSAIGALLWGVLLAAMKVSPVPVMRGFATAYVNIVRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPF 167
            P  +++ F    +   L +        F
Sbjct: 62  TPLTLIVLFCSIGLYQNLGLTLAPENSSF 90


>gi|187477188|ref|YP_785212.1| amino acid ABC transporter permease [Bordetella avium 197N]
 gi|115421774|emb|CAJ48285.1| amino acid ABC transporter, permease protein [Bordetella avium
           197N]
          Length = 225

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 97/206 (47%), Gaps = 19/206 (9%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   + +   +LG++L++           +  +  PL          L +L  + L   L
Sbjct: 34  TGLAVVLAGTLLGVLLAIL----------RALEVRPLSLAIVMFADVLRSLPPLVLLIVL 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           +F  P +              F+  +I+LS   AA+  E V +G+ ++P GQMEAA + G
Sbjct: 84  YFGLPEV--------GLPLSAFLVTWISLSLVLAAYAEESVWAGIASLPPGQMEAARSSG 135

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +A R V+LPQA+R  +P LT++ +++ KN++L   V   +L++      + +G   
Sbjct: 136 LSWWQAMRWVILPQAVRRAVPTLTNRIISITKNTALGSVVSLHELLNAAQGASSLSGNPT 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNA 390
             +++    Y+ + + + +F   L  
Sbjct: 196 P-LMMAAIAYVIIFLPLVVFSRWLEK 220


>gi|254518098|ref|ZP_05130154.1| amino acid permease [Clostridium sp. 7_2_43FAA]
 gi|226911847|gb|EEH97048.1| amino acid permease [Clostridium sp. 7_2_43FAA]
          Length = 224

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 100/235 (42%), Gaps = 22/235 (9%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + F +    R +    +T++      V S +LG++  +            T K   + 
Sbjct: 6   NNIIFNVDNMKRLMEGLLVTLNVAIISVVLSTILGVIFGIIM----------TSKRKVVK 55

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
            IST  +  +  + L+   +  +F  P L   +              YI  + +  A I 
Sbjct: 56  VISTIYLESIRIIPLMVWLFLFYFGVPTLLNIHLESTIV-------GYIVFTLWGTAEIG 108

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           ++VR  + ++P+   E+A+AL L   K  R +++P ++R ++P + +    ++K ++L  
Sbjct: 109 DLVRGAITSIPKIYYESAMALSLNKIKTYRYIIIPVSIRRVMPGIINLSTRMIKTTTLMT 168

Query: 343 AVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +G  DLV VG  II +T       +  I  + + IY  +   I+L    L  K+
Sbjct: 169 LIGAVDLVKVGQQIIERTVLTEPLASFWIYGVLLIIYFLICFPISLGAKALEKKL 223



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 44/85 (51%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           ++ G + T  +A   ++ +TI+G + G    S  K+V  I  +Y+E  R IP +V +F  
Sbjct: 18  LMEGLLVTLNVAIISVVLSTILGVIFGIIMTSKRKVVKVISTIYLESIRIIPLMVWLFLF 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  V ++L I   S ++ + +F   
Sbjct: 78  YFGVPTLLNIHLESTIVGYIVFTLW 102


>gi|299066292|emb|CBJ37476.1| putative Glutamine transport system permease (glnP) abc transporter
           family [Ralstonia solanacearum CMR15]
          Length = 248

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 11/186 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +      L  +    I   P L+ +   +           F          E+ +  
Sbjct: 46  RAWRIAPFNGLFKVYVEAIRNTPFLIQLMFVF-----------FGLPSLGLQINEWQAAL 94

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           + +     A+I EIVR+G+   PRGQ+EAA AL ++     R V+L  A++ + P L+SQ
Sbjct: 95  LTVVVNLGAYITEIVRAGIQETPRGQLEAASALAMSRWACFRHVVLRPALQKVWPALSSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++  +S+   +   DL      I ++  +A E  L+   +Y +L++++   +  +  
Sbjct: 155 IVIVMLGTSVVSQIAAQDLTFAANFIQSRNFRAFETYLVVTVLYFALALLLRQLLAWIAQ 214

Query: 391 KIALKE 396
           +  +  
Sbjct: 215 RFVVVR 220


>gi|163739645|ref|ZP_02147054.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
 gi|163741366|ref|ZP_02148757.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161385100|gb|EDQ09478.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Phaeobacter gallaeciensis 2.10]
 gi|161387104|gb|EDQ11464.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Phaeobacter gallaeciensis BS107]
          Length = 268

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 91/218 (41%), Gaps = 17/218 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
             + V+G V++     L+++      +     +I  F+  G P  +     Y L      
Sbjct: 48  AIAVVVGFVIANGV-ALAKNSTSTPLRKAAEWFI--FIFRGSPLFIQFFFAYFLFLQLKS 104

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +        + +S  +M   I L   TAA+ AEI    L ++P+G +EAA A GL+    
Sbjct: 105 VSPIF----NPLSAAWMGALIVLILNTAAYSAEIFYGALRSIPKGDIEAADAYGLSGWPR 160

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAI 364
            R ++ P  MR   P  T++ + L   ++L    GF       D +       ++T    
Sbjct: 161 FRRIMWPTMMRLAWPSYTNEAIFLFHATTLVFFSGFPAWQQRGDALYYASYFADKTFNPF 220

Query: 365 EIILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398
               I  F ++ L++++     +   RLNA +  ++++
Sbjct: 221 VPYPILAFYFILLTLVVIGIFGIINTRLNAHLPQEKRR 258


>gi|290891403|ref|ZP_06554464.1| hypothetical protein AWRIB429_1854 [Oenococcus oeni AWRIB429]
 gi|290479049|gb|EFD87712.1| hypothetical protein AWRIB429_1854 [Oenococcus oeni AWRIB429]
          Length = 105

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/103 (35%), Positives = 62/103 (60%)

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +GQMEAA + GL++ +A R V++PQ MR  +P L +Q++  LK++S+  A+G  +L 
Sbjct: 2   SVDKGQMEAARSNGLSYWQAMRYVVMPQGMRITVPSLINQFIITLKDTSILQAIGLVELT 61

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
             G  I+ +T Q  +I  I   IYL +  ++    N + +KI 
Sbjct: 62  QTGNLIVARTQQGFQIWAIVAIIYLVMITLLTWLSNFVQSKIK 104


>gi|325978427|ref|YP_004288143.1| inner membrane amino-acid ABC transporter permease [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325178355|emb|CBZ48399.1| inner membrane amino-acid ABC transporter permease protein
           [Streptococcus gallolyticus subsp. gallolyticus ATCC
           BAA-2069]
          Length = 225

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L      +     I + S V+ IV   F          +  + L  +Y+    
Sbjct: 8   VLFQGNNLWRLFQGLLVTINISLLSIVISIVFG-FLFGFVMTSRFRIVRVLAQIYLEFIR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        + L + ++F        N  G        ++  I  S +  A + ++VR  
Sbjct: 67  IMP-----QLVLLFLVYFGLARTFNLNLSGE-------VAALIVFSMWGIAEMGDLVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P+ Q E+ +ALGLT  +    V++PQ +R ++P   +    ++K +SL V +G  +
Sbjct: 115 LTSLPKHQFESGLALGLTKPQLFIYVIIPQILRRLLPQAVNLMTRMIKTTSLIVLIGVVE 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           +V VG  II      +      I  +   +Y ++   I+     L  
Sbjct: 175 VVKVGQQIIEANRLTVPSAAIWIYGLIFLMYFAVCFPISRLSMYLEK 221



 Score = 45.3 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 38/88 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G + T  ++   ++ + + G L G    S  ++V  + ++Y+E  R +P LV++
Sbjct: 15  LWRLFQGLLVTINISLLSIVISIVFGFLFGFVMTSRFRIVRVLAQIYLEFIRIMPQLVLL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           F +Y  +     +     V    +F   
Sbjct: 75  FLVYFGLARTFNLNLSGEVAALIVFSMW 102


>gi|317053654|ref|YP_004118788.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
 gi|316952759|gb|ADU72232.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. At-9b]
          Length = 220

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
              A   + S + G+ +      L+  +     + L   Y+  F     P+LV + L Y 
Sbjct: 22  METALYALLSILFGLSIG-AIGALTLVYARPGWRRLVRCYVEFF--RNTPSLVQLFLIY- 77

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             F  P L       G  +SP  ++  IALS Y  A++ EI+R+GL+++PRG  EA  AL
Sbjct: 78  --FGLPSL-------GLHLSPP-VAGIIALSLYCGAYMTEILRAGLVSLPRGLSEAGEAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+ R+  R VL   AM+++ P L SQ +  L  +SL   +G  ++   G  + ++T ++
Sbjct: 128 GLSKRQIIRYVLTLPAMQNVFPALASQMVLTLIGTSLISQIGVEEIFHSGSFVDSRTFRS 187

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            EI L+   +Y     ++ + +  +  +   + 
Sbjct: 188 FEIYLLICGLYFFAVSLMKVLLRMVWYRFQARR 220



 Score = 42.6 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 62/202 (30%), Gaps = 6/202 (2%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            + S   Y+  +  G + T   A   ++    IG +     + A      + R YVE FR
Sbjct: 6   DFASLLPYSAVLAKGLMETALYALLSILFGLSIGAIGALTLVYARPGWRRLVRCYVEFFR 65

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLG 197
           N P LV +F +Y  + S+       +     + L           M    +  + S   G
Sbjct: 66  NTPSLVQLFLIYFGLPSLGLHLSPPVAGIIALSLY------CGAYMTEILRAGLVSLPRG 119

Query: 198 IVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFI 257
           +  +  A  LS+    +    LP +      +     L LI            +      
Sbjct: 120 LSEAGEALGLSKRQIIRYVLTLPAMQNVFPALASQMVLTLIGTSLISQIGVEEIFHSGSF 179

Query: 258 GGSTVSPEFMSLYIALSCYTAA 279
             S     F    +    Y  A
Sbjct: 180 VDSRTFRSFEIYLLICGLYFFA 201


>gi|254489632|ref|ZP_05102834.1| nopaline ABC transporter, permease protein [Roseobacter sp. GAI101]
 gi|214041802|gb|EEB82443.1| nopaline ABC transporter, permease protein [Roseobacter sp. GAI101]
          Length = 221

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 99/227 (43%), Gaps = 7/227 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +    L      +     + + SF++ +++++ A  L      K  +     Y+   ++ 
Sbjct: 1   MIWPYLPQFAAGLKLTLLVSLGSFLIAMLVAILAVPLI-MSGPKLVRMFLGGYVQ--IVR 57

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P L++I + +        +      G         +   AL+    A++ EI+R+ LI
Sbjct: 58  GVPELLVIFMVFYGG----TVVLSTISGSYFEVDALSAGIAALAAVAFAYLLEILRAALI 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P GQ EA   LGL   +    ++ PQ +   +P + +Q+L  LK S+L   VG  +L+
Sbjct: 114 SIPAGQREAGQVLGLKRHQVFSRIIFPQMLMRALPGIGNQWLISLKESALVSVVGLEELM 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                    T + +   L+   IY++++ +    + +   +++  ++
Sbjct: 174 RHSVIAAGATREPMVFYLLAALIYVAITGISTFLLRQAELRLSSGKQ 220



 Score = 40.3 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
             Y      G   T  ++    + A ++  L     +S  KLV      YV++ R +P L
Sbjct: 3   WPYLPQFAAGLKLTLLVSLGSFLIAMLVAILAVPLIMSGPKLVRMFLGGYVQIVRGVPEL 62

Query: 143 VVIFFLYKSVL 153
           +VIF ++    
Sbjct: 63  LVIFMVFYGGT 73


>gi|319405907|emb|CBI79539.1| Glutamate/aspartate transport system permease protein gltK
           [Bartonella sp. AR 15-3]
          Length = 178

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 12/190 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R    K    +  +YI+      L  ++L                  FI G+++    
Sbjct: 1   MMRLSSLKLISTIATIYITAMRSIPLVMVILWFFV-----------LLPFIIGTSIGAN- 48

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S  I  + + AA+ AEI+R+G++++ +GQ  A  ALG+T+ +   +V+LPQA R+++P 
Sbjct: 49  KSALITFTAFEAAYFAEIMRAGILSISQGQKHAGQALGMTYWQNMSIVILPQAFRNMLPV 108

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +Q + L ++++L  A+    L++    + N  G   E  ++    Y  +   ++  ++
Sbjct: 109 FLTQIIILFQDTTLVYAISGNSLLNGFDIVSNNFGVKQEAYILAAIFYFVICFTLSQIVS 168

Query: 387 RLNAKIALKE 396
            L  KI++  
Sbjct: 169 FLQKKISIIR 178


>gi|262278740|ref|ZP_06056525.1| ArtM protein [Acinetobacter calcoaceticus RUH2202]
 gi|262259091|gb|EEY77824.1| ArtM protein [Acinetobacter calcoaceticus RUH2202]
          Length = 221

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 22/231 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F      R +     T         FS +LG +L +              KAL  LY+
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAILGTILGVIM-----TSKNIAVKALCRLYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I     ++++   +   F      QF+               +    +  A + ++
Sbjct: 60  EAIRIIP---ILVLLFVFYFGFATWFNWQFS---------AMWVCVVVFVLWGTAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++K SSLAV +
Sbjct: 108 VRAAITSIDQHQRDSAYALGLTHVQALVYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLI 167

Query: 345 GFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           G  +++ VG  II  +   +      I      +Y  +   ++     L  
Sbjct: 168 GVVEVIKVGQQIIENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEK 218



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 47/97 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   +S+   ++ G   T  +AF  +  + I+GT++G    S N  V  +CR+Y+E  
Sbjct: 3   LDYLFQASHLERLMWGLWATAKIAFISVFFSAILGTILGVIMTSKNIAVKALCRLYLEAI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R IP LV++F  Y    +       ++ +   +F+  
Sbjct: 63  RIIPILVLLFVFYFGFATWFNWQFSAMWVCVVVFVLW 99


>gi|150395400|ref|YP_001325867.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|150026915|gb|ABR59032.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
          Length = 274

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 13/209 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
              F+L + L LF           TG +   +    F      T +L+ L    +    +
Sbjct: 73  FLGFLLAVPLGLFQV---------TGPSFLKVPARIFCTVIRGTPLLLQLWLLYYGLGSL 123

Query: 251 LGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             QF  I  S + P     +     AL+   AA+  E++R     VP G++EAA A G+ 
Sbjct: 124 FPQFPAIRQSFLWPYLREAWPYGVAALTVSFAAYEGEVMRGAFAGVPAGELEAARAYGMG 183

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R + LP+A+   +P L  + +  LK++ L   +   D+ +V   +  +T    E 
Sbjct: 184 RWTMFRRIWLPRAIHRALPTLNGETVLQLKSTPLVATITVVDVYAVISKVRQETYLTYEP 243

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +L+   IY+ L+  + +       +I  +
Sbjct: 244 LLLLAAIYMCLTGTLVVAFRYFENRIPTR 272


>gi|33865376|ref|NP_896935.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 8102]
 gi|33632545|emb|CAE07357.1| ABC transporter for amino acids, membrane component [Synechococcus
           sp. WH 8102]
          Length = 324

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 8/172 (4%)

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L + ST  I  +  + LIA+ +      P+     F+         +   +A + + AA+
Sbjct: 148 LRWSSTVYIELMRAVPLIAVLFFGQLLIPL-----FLPPGLEINRVLRAVLAFALFAAAY 202

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           IAE VR GL A+P  Q EAA  LGL+  +  +LV+LPQA+R  +P LT+Q + LL+N+SL
Sbjct: 203 IAEDVRGGLQAIPPTQREAASVLGLSPLQTLQLVVLPQALRVALPSLTNQAVGLLQNTSL 262

Query: 341 AVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
              +G  +L+ +  +++      G+ +E+ L    +Y      +AL    L 
Sbjct: 263 MAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMALLARHLE 314


>gi|229903210|ref|ZP_04518323.1| Arginine ABC transporter, permease proteinArtQ [Yersinia pestis
           Nepal516]
 gi|229678980|gb|EEO75083.1| Arginine ABC transporter, permease proteinArtQ [Yersinia pestis
           Nepal516]
          Length = 133

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 51/102 (50%)

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q E+  ALGL+       +++PQ  R  +P L +Q+L LLK+++L   +   DL+    +
Sbjct: 29  QWESGQALGLSQTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKS 88

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
           I  +T +     +I   IYL ++++    +  +  +    E+
Sbjct: 89  IATRTQEPFTWYVIAAAIYLVVTLLSQYVLKWIELRTTRFER 130


>gi|329118222|ref|ZP_08246932.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465643|gb|EGF11918.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Neisseria bacilliformis ATCC BAA-1200]
          Length = 225

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 88/204 (43%), Gaps = 7/204 (3%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             +L   +SL +   S  F    G  L           G   L  + +   L +      
Sbjct: 21  GLLLTAQISLLSVAFSCVFGTLFGLLL-RSRNRLLRFAGRLYLETVRIVPILVWLFGFYF 79

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             +   G  +   ++ +++  + +  A + ++VR  L +V + Q E+A+ALGL+ R+   
Sbjct: 80  GLSVWTGVHIDGLWVCVWV-FTLWGVAEMGDLVRGALESVEKHQTESALALGLSRRQVFV 138

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----II 367
            + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   +      + 
Sbjct: 139 YIELPQSVRRVLPGAINLFTRMIKTSSLASLIGVIEVVKVGQQIIENSLLTVPNASLWVY 198

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
            +   +Y      ++L   RL  K
Sbjct: 199 GLIFILYFLCCWPLSLLAARLENK 222


>gi|163759019|ref|ZP_02166105.1| ABC amino acid transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
 gi|162283423|gb|EDQ33708.1| ABC amino acid transporter, inner membrane subunit [Hoeflea
           phototrophica DFL-43]
          Length = 225

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 13/210 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F ++ +   +         ++ + + S +LG +L+   + L R+F     +     Y+ 
Sbjct: 5   FFEIYRSQEYMGLLAEGAALSSALAIGSGLLGFLLAAVLSSL-RYFEVPGLRHFATAYVE 63

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
             +I   P +V +   +   F  P+L  + +       P +    +AL+   + + +EI+
Sbjct: 64  --VIRNTPLIVQL---FFFAFGLPLLVGYAW-------PFWAHALLALTINFSGYFSEIL 111

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R+G  AVP GQ+EAA+ALG+      R V+ PQA+ ++   L SQ++ L   + +   +G
Sbjct: 112 RAGYAAVPAGQVEAAMALGVKKLTLFRKVIFPQAVAAMYSSLNSQFIFLFLTTGVIAEIG 171

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYL 375
             DL S G  I ++T ++ E+ +    IY+
Sbjct: 172 VTDLTSAGLFIDSRTFRSFEVFITLTVIYI 201


>gi|113868712|ref|YP_727201.1| ABC transporter permease [Ralstonia eutropha H16]
 gi|113527488|emb|CAJ93833.1| ABC-type transporter, permease component: PAAT family [Ralstonia
           eutropha H16]
          Length = 227

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 18/213 (8%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
            D+     F        L    LT+  +    VF FVLG  L++      R       + 
Sbjct: 1   MDYQFDFSFLSTGWRDLLDGVWLTLRMSVATIVFGFVLGTALAVV-----RTQGPAWARR 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
              +Y+            L+   + L F    +        + V    +++         
Sbjct: 56  CVTVYVDVIRNTP-----LVIQAFWLFFGLAAVQVRVPAMAAAVVALVVNVSA------- 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            +  EIVR+G+ +VPRGQ+EAA  LGL+  +  RLV+LPQA+  + P L SQ++ ++  +
Sbjct: 104 -YTTEIVRAGIESVPRGQLEAASCLGLSRWQMLRLVVLPQAVERMYPALISQFVLMMLAT 162

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           S+   +   +L +VG  I ++T +  EI L+  
Sbjct: 163 SIMSQISAEELTAVGYRIQSETFRGFEIYLVIA 195



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 36/79 (45%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++  S+    +L G   T  ++ + ++   ++GT +   R            VYV+V R
Sbjct: 6   DFSFLSTGWRDLLDGVWLTLRMSVATIVFGFVLGTALAVVRTQGPAWARRCVTVYVDVIR 65

Query: 138 NIPPLVVIFFLYKSVLSVL 156
           N P ++  F+L+  + +V 
Sbjct: 66  NTPLVIQAFWLFFGLAAVQ 84


>gi|319899108|ref|YP_004159201.1| Glutamate/aspartate transport system permease protein gltK
           [Bartonella clarridgeiae 73]
 gi|319403072|emb|CBI76627.1| Glutamate/aspartate transport system permease protein gltK
           [Bartonella clarridgeiae 73]
          Length = 178

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 12/190 (6%)

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF 266
           + R    K    L ++YI+      L  ++L                  FI G+++    
Sbjct: 1   MMRLSSVKLLSTLSIIYITAMRSIPLVMVILWFFV-----------LLPFITGTSIGAN- 48

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
            S  I  + + AA+ AEI+R+G++++ +GQ +A  ALG+T+ +  R+V+LPQA R+++P 
Sbjct: 49  KSALITFTAFEAAYFAEIMRAGILSISQGQKQAGQALGMTYWQNMRIVILPQAFRNMLPV 108

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
             +Q + L ++++L  A+    L++    + N  G   E  ++    Y  +   ++  + 
Sbjct: 109 FLTQIIILFQDTTLVYAISGNSLLNGFDIVSNNFGVKQEAYILAAIFYFVICFTLSQIVL 168

Query: 387 RLNAKIALKE 396
            L  KI++  
Sbjct: 169 LLQKKISIIR 178


>gi|152979604|ref|YP_001345233.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
 gi|150841327|gb|ABR75298.1| polar amino acid ABC transporter, inner membrane subunit
           [Actinobacillus succinogenes 130Z]
          Length = 222

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 92/210 (43%), Gaps = 22/210 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                F+ +LG++L +  T  ++         L ++ I   L+         A  + +H 
Sbjct: 27  FVSVFFACILGVLLGMLMTAHNKIIRFLCQFYLEVVRIIPLLVLLFLVYFGFAKWFNVHL 86

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           D  ++                   +    +  A + ++VR  L ++ + Q+EA+ ALGLT
Sbjct: 87  DGVLVC-----------------IVVFVFWGTAEMGDLVRGALTSIEKHQIEASYALGLT 129

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT-----G 361
             +    +LLPQ+++ + P   + +  ++K SSLA+ +G  +++ VG  II  +      
Sbjct: 130 KMQTFIYILLPQSLKRVTPGAINLFTRMVKTSSLAMLIGVLEVIKVGQQIIETSLFTDPS 189

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            A+ I  +   +Y  +   ++LF   L ++
Sbjct: 190 AALWIYGVIFALYFIICYPLSLFSKYLESR 219



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 45/85 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +AF  +  A I+G L+G    + NK++ ++C+ Y+EV R IP LV++F +
Sbjct: 15  LLGGLGVTAEIAFVSVFFACILGVLLGMLMTAHNKIIRFLCQFYLEVVRIIPLLVLLFLV 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y        +    +++   +F+  
Sbjct: 75  YFGFAKWFNVHLDGVLVCIVVFVFW 99


>gi|315452693|ref|YP_004072963.1| amino-acid(glutamine) ABC transporter permease protein
           [Helicobacter felis ATCC 49179]
 gi|315131745|emb|CBY82373.1| amino-acid(Glutamine) ABC transporter permease protein
           [Helicobacter felis ATCC 49179]
          Length = 226

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 89/228 (39%), Gaps = 18/228 (7%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
             N   L+     + T   + + S VL ++  +    L   F  +  + +  +Y+    I
Sbjct: 7   LFNADNLARLGEGLATTLSLALISIVLSLIGGVALGVLM-TFGGRVARLICRVYLEAVRI 65

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P LV + + Y        L              F +  +    +  A + ++ R  L
Sbjct: 66  --VPLLVWLFIVYFGFASILDLH----------IEAFSAGVVVFVLWGVAEMMDLTRGAL 113

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++ + Q ++A ALGL   + T  VL PQA  +++P   + +  ++K ++L   +G  DL
Sbjct: 114 SSISQHQRQSATALGLKPLQTTFYVLFPQAFLALLPSSVNLFTRMIKTTALISLIGSIDL 173

Query: 350 VSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           + VG  II          +  +  +   +Y  L   ++     L  K 
Sbjct: 174 LKVGQQIIEVNLINMPHASFFVYGLIFILYFMLCYPLSHLSQYLEKKY 221



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 37/82 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  LA   ++ + I G  +G       ++   ICRVY+E  R +P LV +F +Y  
Sbjct: 19  GLATTLSLALISIVLSLIGGVALGVLMTFGGRVARLICRVYLEAVRIVPLLVWLFIVYFG 78

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
             S+L +   +      +F+  
Sbjct: 79  FASILDLHIEAFSAGVVVFVLW 100


>gi|118474262|ref|YP_892320.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413488|gb|ABK81908.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 220

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 98/219 (44%), Gaps = 18/219 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L   +LT+       V S + G +L++      R++  K  + +   Y+  +        
Sbjct: 14  LYGLSLTLIMAFFAAVGSIIFGSILAVM-----RNYGNKFIRGIAGAYVEIYRNTP---- 64

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            L+   Y   F  P +  F+F+ G + +   +   I L  YT++ ++EI+R GL ++P+G
Sbjct: 65  -LLLWMYAGCFVLPTI--FSFLQGFSYA---VLGTIGLFLYTSSVMSEIIRGGLNSIPKG 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA + G         ++ PQ ++   P + SQ +  +K++S    +G  +L +    
Sbjct: 119 QFEAAASQGFGFFYTLYKIIFPQTIKKATPAILSQVITTVKDTSFMAGLGVYELTNQSKL 178

Query: 356 IIN---QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           I+    +    + +I +   +Y  +   +++ +   N +
Sbjct: 179 ILASLKEFSHILAVIGLVAAMYFIVCFSLSIIVRYYNTR 217



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
           +L G   T  +AF   + + I G+++   R   NK +  I   YVE++RN P L+ ++
Sbjct: 13  LLYGLSLTLIMAFFAAVGSIIFGSILAVMRNYGNKFIRGIAGAYVEIYRNTPLLLWMY 70


>gi|229589727|ref|YP_002871846.1| putative ABC transporter membrane protein [Pseudomonas fluorescens
           SBW25]
 gi|229361593|emb|CAY48470.1| putative ABC transport system, membrane protein [Pseudomonas
           fluorescens SBW25]
          Length = 244

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 53/243 (21%), Positives = 105/243 (43%), Gaps = 5/243 (2%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATR-LSRHF 211
           +S       +    FG+  +    ++   +++  A   V   +  IV SL A   L+   
Sbjct: 1   MSHWLELFVNWTAGFGLNYSFLLDAYQRGSLEQGALTTVLLCLFTIVGSLLAGVGLAAML 60

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
              +        +   +    PTLV +       F    +     +G +     F  + I
Sbjct: 61  TSASPWLAKPARVFVEVTRNTPTLVQL----YCAFLVLNMLLTQAVGAANPLTPFAWVVI 116

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
            +S +  AF AE +R+G+ AVP   +EAA +L  + R+    V LP A+R  +P L +  
Sbjct: 117 VISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFSRRQLLWNVQLPLALRFALPSLINNL 176

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           ++L+K +++A A+   D+      I  Q+   +E++++ +  +  LS ++      L A+
Sbjct: 177 IDLVKMTAVASAIAVGDITYASIMIWTQSDNVLELMILILSFFGLLSFIVNCVGRYLEAR 236

Query: 392 IAL 394
           + +
Sbjct: 237 LRM 239



 Score = 40.7 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 63  FLSERAGFEIDQGIVPYTSDSSYAT-AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSA 121
           F++  AGF ++   +      +Y   ++  G + T  L    ++ + + G  + A   SA
Sbjct: 8   FVNWTAGFGLNYSFL----LDAYQRGSLEQGALTTVLLCLFTIVGSLLAGVGLAAMLTSA 63

Query: 122 NKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           +  +A   RV+VEV RN P LV ++  +  +
Sbjct: 64  SPWLAKPARVFVEVTRNTPTLVQLYCAFLVL 94


>gi|83952546|ref|ZP_00961277.1| ABC polar amino acid transporter, inner membrane subunit
           [Roseovarius nubinhibens ISM]
 gi|83836219|gb|EAP75517.1| ABC polar amino acid transporter, inner membrane subunit
           [Roseovarius nubinhibens ISM]
          Length = 232

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 13/228 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL-FATRLSRHFHEKTGKALPLLYISTFL 228
           FLN   L     ++     + V+  VL I++ +   T L+     + G    L+ +   +
Sbjct: 16  FLNWEVLVKYAPSILAGVGVTVWLSVLIILVGMTLGTLLACLRAYRVGPLSFLIVVFADV 75

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              LP LV+I L +           F           FM L++ L+   AAF  EI+ +G
Sbjct: 76  FRALPPLVVILLVF-----------FGLPNAGIYLSAFMVLFVVLTLILAAFAEEILWAG 124

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + +V +GQ EAA + GL   +    V+LPQAMR  IPPLT++ + + K ++L   +G  D
Sbjct: 125 ITSVDKGQWEAARSTGLGFTQTLGYVILPQAMRLAIPPLTNRAIAITKMTALGTVIGVPD 184

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +++   T  + +G A  ++L  +   + L +   +    L  + + K+
Sbjct: 185 ILNQATTAQSFSGNASPLLLAALAY-VLLFLPFVIMSRWLERRYSWKK 231



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 46/98 (46%)

Query: 72  IDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRV 131
             Q  + +     YA +IL G   T WL+   ++    +GTL+   R      ++++  V
Sbjct: 12  FAQTFLNWEVLVKYAPSILAGVGVTVWLSVLIILVGMTLGTLLACLRAYRVGPLSFLIVV 71

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           + +VFR +PPLVVI  ++  + +        +VL   +
Sbjct: 72  FADVFRALPPLVVILLVFFGLPNAGIYLSAFMVLFVVL 109


>gi|260425804|ref|ZP_05779784.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Citreicella sp. SE45]
 gi|260423744|gb|EEX16994.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Citreicella sp. SE45]
          Length = 268

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 17/222 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +   A   V  F L   L++      +  H +  +     +I  F+  G P  +  
Sbjct: 40  MIWNVYFGALALVSGFFLATALAV-----GKASHNRLARKASEWFI--FVFRGSPLFIQF 92

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y L      +           S  ++   + L   TAA+  EI    L++VP+G +E
Sbjct: 93  FFAYFLFLSLKSVSPMF----GAFSSAWLGALVVLFLNTAAYSGEIFYGALLSVPKGDVE 148

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSV 352
           AA A G +     R ++ P  +R   P  T++ + L   ++L    GF       D +  
Sbjct: 149 AADAYGFSGWPRFRRIIWPTMLRLAWPAYTNEAIFLFHATTLVYFSGFPALQQRGDALYY 208

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                ++T        I    ++ L+++I      +N ++  
Sbjct: 209 ANYFADKTFNPFVAYPILAGYFIVLTLLIIWLFGAINTRLNR 250


>gi|227533181|ref|ZP_03963230.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227189195|gb|EEI69262.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 238

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 7/219 (3%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LIFGLPT 234
           L      +     I  +      +  L    L    H    + L LLY     L+   P 
Sbjct: 16  LFEVLQHLAPYLGITFWIIGASALFVLVFGSLISLVHFSHSRVLELLYNGFVSLMRATPV 75

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+L+ L +   +  P+L Q   I   +   +     +A+    +A+ +E +RS   ++P+
Sbjct: 76  LLLLMLVF---YGMPLLFQLVGID-ISWWAKTSFAILAIGLENSAYFSENLRSAYASIPQ 131

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q +A  +L  +   A R +L PQ   + +P + +  + ++KNS+    +G  DL     
Sbjct: 132 SQYDACTSLHFSRIAAIRRILGPQVFAAALPNIGNTLITIVKNSAYVYVIGITDLYEQAQ 191

Query: 355 TIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
            I   +   Q + + ++   IY ++   I  F  +L  +
Sbjct: 192 IIAQASFGKQQVVVFIVLSLIYWAICAAIQAFFTQLERR 230


>gi|306831518|ref|ZP_07464676.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304426303|gb|EFM29417.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 225

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 18/227 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L      +     I + S V+ IV   F          +  + L  +Y+    
Sbjct: 8   VLFQGNNLWRLFQGLLVTINISLLSIVISIVFG-FLFGFVMTSRFRIVRVLAQIYLEFIR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        + L + ++F        N  G        ++  I  S +  A + ++VR  
Sbjct: 67  IMP-----QLVLLFLVYFGLARTFNLNLSGE-------VAALIVFSMWGIAEMGDLVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P+ Q E+ +ALGLT  +    V++PQ +R ++P   +    ++K +SL V +G  +
Sbjct: 115 LTSLPKHQFESGLALGLTKTQLFIYVIIPQILRRLLPQAVNLMTRMIKTTSLIVLIGVVE 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           +V VG  II      +      I  +   +Y ++   I+     L  
Sbjct: 175 VVKVGQQIIEANRLTVPSAAIWIYGLIFLMYFAVCFPISRLSMYLEK 221



 Score = 45.3 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 38/88 (43%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  G + T  ++   ++ + + G L G    S  ++V  + ++Y+E  R +P LV++
Sbjct: 15  LWRLFQGLLVTINISLLSIVISIVFGFLFGFVMTSRFRIVRVLAQIYLEFIRIMPQLVLL 74

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           F +Y  +     +     V    +F   
Sbjct: 75  FLVYFGLARTFNLNLSGEVAALIVFSMW 102


>gi|304395107|ref|ZP_07376991.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
 gi|304357360|gb|EFM21723.1| polar amino acid ABC transporter, inner membrane subunit [Pantoea
           sp. aB]
          Length = 234

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 10/217 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   + ++G  L+L AT   R         L  LY+S      +P ++ + + + 
Sbjct: 15  PLTLGIMFVAMIVGFFLALIATFF-RVRRIPVLSQLADLYVS--YARSVPVVLQLFVAF- 70

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
             +  P++   +  G +      ++  I LS Y   +++E++R   +AV RGQ +A  +L
Sbjct: 71  --YGMPLIT--DNFGFNDFFTANVAAMIGLSLYHGGYLSEVMRPAYLAVERGQHDATDSL 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-- 361
           G + R+    V+ PQA+   +P   +  + L+ N +L + +G AD+++    I+ +    
Sbjct: 127 GYSFRQKMLRVVGPQAVHFALPGYGNAIIYLIHNVALVMYIGAADVMATAHLIMERDYNQ 186

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 L+   +Y  L  +  L +     + A    K
Sbjct: 187 YQFGTYLVLAVLYSLLCGVAWLVIRFFEQRHAKYSSK 223



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  + F  MI    +  +    R+    +++ +  +YV   R++P ++ +F  
Sbjct: 10  LLSALPLTLGIMFVAMIVGFFLALIATFFRVRRIPVLSQLADLYVSYARSVPVVLQLFVA 69

Query: 149 YKSVLSV 155
           +  +  +
Sbjct: 70  FYGMPLI 76


>gi|16262718|ref|NP_435511.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|307312880|ref|ZP_07592509.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|14523344|gb|AAK64923.1| ABC transporter, permease [Sinorhizobium meliloti 1021]
 gi|306899394|gb|EFN30027.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 218

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 18/232 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           FG       +     T+      FV   ++GIVL+L      R F            I+T
Sbjct: 4   FGSPEFLFIVYALRWTLTLTVLAFVGGGIMGIVLALLRIARIRAFSA----------ITT 53

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F +  +  L L+ L +  ++   +                 +  IAL+  ++AF+  I  
Sbjct: 54  FYMQVIQGLPLLVLLFLCYYAPSLF--------GIEIAALTAAAIALTINSSAFLGAIWE 105

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           S L A+P+ Q E+A AL LT  K  R V+ PQA+R  +P      + ++K +SLA  +GF
Sbjct: 106 SALRAIPKAQWESADALALTPYKTLRFVIAPQAIRLALPSTVGFLVQIIKQTSLASIIGF 165

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            ++   G  + N T + ++  L    +Y ++   +      L  + A +  +
Sbjct: 166 IEITRAGQLVSNATFEPLKAFLSVAALYFAVCFPLTQLSLWLERRTACRGAR 217


>gi|301155144|emb|CBW14608.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 222

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T +       F+ +LG++  +  T  +   +      L  + I   L       
Sbjct: 16  LNGLWVTAEIAFVSVFFACILGVIFGVIMTSRNPIINTICRFYLEFVRIIPLLALLFLAY 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             +A  + +H D   +    FI                  +  A + ++VR  L ++ + 
Sbjct: 76  FGLAKWFDIHLDGISVCILVFI-----------------FWGTAEMGDLVRGALTSIEKH 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+E+A ALGLT  +    +LLPQ+++ + P   + +  ++K SSLA+ +G  +++ VG  
Sbjct: 119 QVESAYALGLTPFQTFVYILLPQSLKRVTPSAINLFTRMVKTSSLAMLIGVVEVIKVGQQ 178

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           II  +       A+ I  +   +Y  +   ++LF   L  +
Sbjct: 179 IIEHSLFSNQSAALWIYGVIFGLYFVICYPLSLFSRYLETR 219



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 33/68 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +AF  +  A I+G + G    S N ++  ICR Y+E  R IP L ++F  
Sbjct: 15  LLNGLWVTAEIAFVSVFFACILGVIFGVIMTSRNPIINTICRFYLEFVRIIPLLALLFLA 74

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 75  YFGLAKWF 82


>gi|154483451|ref|ZP_02025899.1| hypothetical protein EUBVEN_01154 [Eubacterium ventriosum ATCC
           27560]
 gi|149735703|gb|EDM51589.1| hypothetical protein EUBVEN_01154 [Eubacterium ventriosum ATCC
           27560]
          Length = 219

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 14/224 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
           N  +            +  +  +L IV+ L    L R+F       +   YI   L    
Sbjct: 7   NEHIPLYVEAAKLTLIMAFWGILLAIVVGLIV-SLIRYFKVPVLDKIVGFYIE--LSRNT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y           F       V        I L+    +++AE  RSGL  V
Sbjct: 64  PLLIQLFFLY-----------FGLPKVGIVLTSEQCGVIGLAFLGGSYMAEAFRSGLDNV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
              Q+++A++LG+   +  R V+LPQA+ + IP   +  + L+K +S+  AV  ADL+ +
Sbjct: 113 ESIQIQSALSLGMKKSQTFRYVILPQAVSNSIPAFCANIIFLIKETSVFSAVALADLMFI 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              +I    +  E + + +  YL + + I+L  + +  ++   E
Sbjct: 173 TKDLIGIYYKTDEALFMLVIAYLIILLPISLICSLVERRVRYAE 216



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 33/62 (53%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  +AF G++ A ++G +V   R     ++  I   Y+E+ RN P L+ +FFLY  +  V
Sbjct: 20  TLIMAFWGILLAIVVGLIVSLIRYFKVPVLDKIVGFYIELSRNTPLLIQLFFLYFGLPKV 79

Query: 156 LP 157
             
Sbjct: 80  GI 81


>gi|325576797|ref|ZP_08147412.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325161003|gb|EGC73121.1| arginine ABC superfamily ATP binding cassette transporter, membrane
           protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 222

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 94/221 (42%), Gaps = 22/221 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L+   +T +       F+ +LG++  +              KA+   Y+    I  L   
Sbjct: 16  LNGLWVTAEIAFVSVFFACILGVIFGVIM-----TSRNPIIKAICRFYLEFVRIIPLL-- 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
              AL +  +F        +  G S          +    +  A + ++VR  L ++ + 
Sbjct: 69  ---ALLFLAYFGLAKWFDIHLDGISVC-------ILVFIFWGTAEMGDLVRGALTSIEKH 118

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+E+A ALGLT  +    +LLPQ+++ + P   + +  ++K SSLA+ +G  +++ VG  
Sbjct: 119 QVESAYALGLTPFQTFVYILLPQSLKRVTPSAINLFTRMVKTSSLAMLIGVVEVIKVGQQ 178

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           II  +       A+ I  +   +Y  +   ++LF   L  +
Sbjct: 179 IIEHSLFSNQSAALWIYSVIFGLYFVICYPLSLFSRYLETR 219



 Score = 41.1 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 33/68 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +AF  +  A I+G + G    S N ++  ICR Y+E  R IP L ++F  
Sbjct: 15  LLNGLWVTAEIAFVSVFFACILGVIFGVIMTSRNPIIKAICRFYLEFVRIIPLLALLFLA 74

Query: 149 YKSVLSVL 156
           Y  +    
Sbjct: 75  YFGLAKWF 82


>gi|86153923|ref|ZP_01072126.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842884|gb|EAQ60096.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 218

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 91/226 (40%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N   L      +    +I   S ++  +  LF   L       + K   +       +  
Sbjct: 6   NTDTLLRLWQGLFVTLEISFISTIITSIGGLFLGILM------SFKNTYIYAFCRLGLEF 59

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +  + L+   + ++F  P    ++    S          I  S +    + ++VR  L +
Sbjct: 60  VRVMPLLVWFFVVYFGFPRWFGWDLSSVSV-------AIIVFSIWGCFEMMDLVRVSLQS 112

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+ Q E+A +LGL   ++   V++PQAMR + P   +    ++K+++ A  +G  +LV 
Sbjct: 113 IPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNLLTRMIKSTTFAYLIGAVELVK 172

Query: 352 VGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           VG  II            I  +  FI+  L   I L+  +L  K +
Sbjct: 173 VGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS 218



 Score = 36.8 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 1/83 (1%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++   +  +    +  G   T  ++F   I  +I G  +G      N  +   CR+ +E 
Sbjct: 1   MLELLNTDTLLR-LWQGLFVTLEISFISTIITSIGGLFLGILMSFKNTYIYAFCRLGLEF 59

Query: 136 FRNIPPLVVIFFLYKSVLSVLPI 158
            R +P LV  F +Y         
Sbjct: 60  VRVMPLLVWFFVVYFGFPRWFGW 82


>gi|187927128|ref|YP_001897615.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|309780169|ref|ZP_07674920.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
 gi|187724018|gb|ACD25183.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12J]
 gi|308920872|gb|EFP66518.1| amino acid ABC transporter, permease protein [Ralstonia sp.
           5_7_47FAA]
          Length = 244

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 11/187 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +      L  +    I   P LV +   +           F          E+ +  
Sbjct: 46  RAWRIAPFNALFKVYVEGIRNTPFLVQLMFVF-----------FGLPSLGVQINEWQAAL 94

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +       A+I EIVR+G+   PRGQ+EAA AL ++     R V+L  A++ + P L+SQ
Sbjct: 95  LTAVVNLGAYITEIVRAGIQETPRGQLEAANALAMSRWAVFRHVVLRPALQKVWPALSSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++  +S+   +   DL      I ++  +A E  L+   +Y +L++++   +  +  
Sbjct: 155 IVIVMLGTSVVSQIAAQDLTFAANFIQSRNFRAFETYLVVTALYFALALLLRQLLAWIGQ 214

Query: 391 KIALKEK 397
           +  +  +
Sbjct: 215 RFVVGRR 221


>gi|84516447|ref|ZP_01003806.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
 gi|84509483|gb|EAQ05941.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Loktanella vestfoldensis SKA53]
          Length = 268

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 79/222 (35%), Gaps = 17/222 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +          FVL   ++L     +R  H+ +           FL  G P  +  
Sbjct: 40  MIWNIYFGLVALCTGFVLATAVALGKASRNRVIHKASA-------WFIFLFRGSPLFIQF 92

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y L      +  F        +  +    + L   TAA+  EI    L ++P+G +E
Sbjct: 93  FFAYFLFLSLKNVSPFF----DPFTSAWAGALVVLFLNTAAYSGEIFYGALQSIPKGDLE 148

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSV 352
           AA A GL+     R +  P  +R   P  T++ + L   ++L    GF       D +  
Sbjct: 149 AADAYGLSGWARFRRITFPTMLRLGWPAYTNEAIFLFHATTLVFFSGFPAIQQKGDALYY 208

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                ++T        I    +++L++++      +N ++  
Sbjct: 209 ARYFADKTFNPFIPYPILAGYFIALTLVVIGVFGLVNGRLNR 250


>gi|27376791|ref|NP_768320.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
 gi|27349933|dbj|BAC46945.1| blr1680 [Bradyrhizobium japonicum USDA 110]
          Length = 220

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 21/231 (9%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                  +   ++     I + + +L  +L L    LS        + +  LY+  F   
Sbjct: 4   WVWPVTLYLGKSLLVTLWISLLTVILATILGLLIAALS-QSTLTFARFVGRLYVELF--R 60

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G+P+L+++   +           F        +    +  I L  +  A I E+ R  L 
Sbjct: 61  GVPSLMILLFVF-----------FALPQIGLRTGPLTAAIIGLGLWGGANIGEVFRGALD 109

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           ++P  Q + A ALGL+  +A   V+LPQA R  +PP   Q   L++ S+L   VG +DL+
Sbjct: 110 SIPHRQEQGARALGLSATEALVFVILPQAFRRALPPYVGQLTVLVQASALTSVVGVSDLL 169

Query: 351 SVGGTIINQ-------TGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                +I +          AIEI L  + I+  +   ++   + +   + +
Sbjct: 170 GSARQMIERLAYVGTGDSHAIEIYLGVLSIFFVICYALSGLASMIERCLRV 220



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 9/149 (6%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
                 +    + T W++   +I ATI+G L+ A   S      ++ R+YVE+FR +P L
Sbjct: 6   WPVTLYLGKSLLVTLWISLLTVILATILGLLIAALSQSTLTFARFVGRLYVELFRGVPSL 65

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLN---------NRGLSFPTLTMDTNAKIFVFS 193
           +++ F++ ++  +            G+ L             L       +  A+    S
Sbjct: 66  MILLFVFFALPQIGLRTGPLTAAIIGLGLWGGANIGEVFRGALDSIPHRQEQGARALGLS 125

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               +V  +      R      G+   L+
Sbjct: 126 ATEALVFVILPQAFRRALPPYVGQLTVLV 154


>gi|330880664|gb|EGH14813.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 201

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 14/215 (6%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
               P  +               T+ +    +   G ++ + A  L   +     +    
Sbjct: 1   MYQPPGWLQELWTAREVLWSGFLTSIQCSALAIAAGTLIGMLAG-LVLTYGGFFARLPIR 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           LY+       +  LVL            +               F +  I L+ +  + +
Sbjct: 60  LYVDLIRGTPVFVLVLAVFYMVPALGWQI-------------SAFQAGAIGLTLFCGSHV 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EIVR  L A+P GQ+EA  A+GL   ++ R VLLPQAMR I+P   +    ++K S+L 
Sbjct: 107 SEIVRGALQAIPAGQLEAGKAIGLRFNQSLRYVLLPQAMRQILPTWVNSSTEIVKASTLL 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLS 376
             +G A+L+     +I +T   +E  L   F++  
Sbjct: 167 SVIGVAELLLSTQQVIARTFMTLEFYLFAGFLFFL 201


>gi|288959824|ref|YP_003450164.1| hypothetical protein AZL_a00890 [Azospirillum sp. B510]
 gi|288912132|dbj|BAI73620.1| hypothetical protein AZL_a00890 [Azospirillum sp. B510]
          Length = 262

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 9/224 (4%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +  +  L     T+   A     S   GI+L+   T  SR              +   L 
Sbjct: 37  YERDMWLEGFRTTLVLIAVTIPVSLAGGILLAGCLTAKSRLLSLPA-------RLFVELT 89

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              PTLV +   + L  +  +       G +     F  +   +  + AA+ AE +R+G+
Sbjct: 90  RNTPTLVQLVCAF-LGLNMLISDALGGAGRNPFGAFFW-VVTVVGLHGAAYHAEALRAGI 147

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP    EAA +LG    +  R V LP A+R  +P + +  +N++K +++A AV   ++
Sbjct: 148 EAVPDTMREAARSLGFGRLEILRWVELPMALRIALPAIFNNLVNIVKLTTVASAVAVGEI 207

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                 I  Q    +E++++ +  + ++++ ++     L  ++ 
Sbjct: 208 TYASIMIWTQRDIVVELMIVLLLFFSAINLALSQVGFWLERRLR 251


>gi|325277398|ref|ZP_08143018.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
 gi|324097471|gb|EGB95697.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas sp. TJI-51]
          Length = 221

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 95/211 (45%), Gaps = 14/211 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            ++     + G+ L +    ++R +  K    L  +Y+   LI   P +V +   +    
Sbjct: 25  LQLTAVGTLFGVALGVLG-AVARAWRLKPFDVLFGVYVE--LIRNTPFIVQLFFIF---- 77

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F          E+ +  +A+     A+  EI+R+G+ A+P+GQ+EAA AL ++
Sbjct: 78  -------FGLPALGVRLTEWQAAVLAMVINLGAYSTEIIRAGIQAIPKGQLEAAAALAMS 130

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +A R V+L  A+  + P L+SQ + ++  S++   +   +L      I ++  +A E 
Sbjct: 131 RAEAFRHVVLQPALAKVWPALSSQIVIVMLGSAVCSQIATEELSFAANFIQSRNFRAFET 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            L+   +YL ++I +   +     +  +  +
Sbjct: 191 YLLTTGLYLIMAIAVRQLLLWFGQRFLMGRR 221



 Score = 40.3 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 38/103 (36%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +L G + T  L   G +    +G L    R    K    +  VYVE+ RN P +V +
Sbjct: 14  GDLLLKGALFTLQLTAVGTLFGVALGVLGAVARAWRLKPFDVLFGVYVELIRNTPFIVQL 73

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           FF++  + ++             M +N    S   +     A 
Sbjct: 74  FFIFFGLPALGVRLTEWQAAVLAMVINLGAYSTEIIRAGIQAI 116


>gi|330810056|ref|YP_004354518.1| ABC transporter, permease component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327378164|gb|AEA69514.1| ABC transporter, permease component [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 216

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 51/226 (22%), Positives = 97/226 (42%), Gaps = 15/226 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L+   L +         ++ V+S +LG +  L                LP   + 
Sbjct: 1   MFSTSLSVNDLLYLLEGAWVTLQLTVWSILLGTLAGLLF--------GLLRALLPRASLP 52

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              +  +   V + +++ L      +   N          F    I L  Y AA+  EIV
Sbjct: 53  LAWLLDVFRSVPLLIQFVLFNSLKSIAGLNL-------SAFAVGCIVLGVYAAAYFTEIV 105

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           R G++AVP     A+ +LGL++ +  R ++LP A R   P   +  L ++K+++L + +G
Sbjct: 106 RGGVLAVPLSTRRASRSLGLSYVQDLRFIVLPIATRVAFPGWLNLVLGVMKDTALVMWIG 165

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L+    TI+ +  + + ++ I   IY  +S+++A    RL  +
Sbjct: 166 IVELLRASQTIVTRIQEPLLVLCIAGLIYYVMSLVVARLGARLERR 211


>gi|241661637|ref|YP_002979997.1| polar amino acid ABC transporter inner membrane subunit [Ralstonia
           pickettii 12D]
 gi|240863664|gb|ACS61325.1| polar amino acid ABC transporter, inner membrane subunit [Ralstonia
           pickettii 12D]
          Length = 244

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 79/187 (42%), Gaps = 11/187 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +      L  +    I   P LV +   +           F          E+ +  
Sbjct: 46  RAWRIAPFNALFKVYVEGIRNTPFLVQLMFMF-----------FGLPSLGVQINEWQAAL 94

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +       A+I EIVR+G+   PRGQ+EAA AL ++     R V+L  A++ + P L+SQ
Sbjct: 95  LTAVVNLGAYITEIVRAGIQETPRGQLEAANALAMSRWAIFRHVVLRPALQKVWPALSSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++  +S+   +   DL      I ++  +A E  L+   +Y +L++++   +  +  
Sbjct: 155 IVIVMLGTSVVSQIAAQDLTFAANFIQSRNFRAFETYLVVTALYFALALLLRQLLAWIGQ 214

Query: 391 KIALKEK 397
           +  +  +
Sbjct: 215 RFIVGRR 221


>gi|86360503|ref|YP_472391.1| amino acid ABC transporter permease [Rhizobium etli CFN 42]
 gi|86284605|gb|ABC93664.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli CFN 42]
          Length = 211

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 10/202 (4%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            + G VL+L  T   R         L  LY+S      +P ++ + + +   +  PVL  
Sbjct: 1   MIAGFVLALITTTF-RVRRIAVISQLADLYVS--YARSVPVVLQLFVAF---YGLPVLVG 54

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
               G        ++  + LS Y   +++E++R   +AV RGQ +AA +LG T R+    
Sbjct: 55  LF--GIDDFVSPTIAAILGLSLYHGGYLSEVMRPAFLAVERGQHDAADSLGYTFRQKLVR 112

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--QAIEIILIWM 371
           V+ PQA+   +P   +  + L+ N +L + +G AD+++    ++ +       E  L+  
Sbjct: 113 VVAPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAHLVMERDYNQYQFETYLVLA 172

Query: 372 FIYLSLSIMIALFMNRLNAKIA 393
            +Y  L +   L +     + A
Sbjct: 173 VLYSVLCLAAWLIVRFFELRSA 194


>gi|226944244|ref|YP_002799317.1| polar amino acid ABC transporter inner membrane permease
           [Azotobacter vinelandii DJ]
 gi|226719171|gb|ACO78342.1| polar amino acid ABC transporter, inner membrane permease component
           [Azotobacter vinelandii DJ]
          Length = 243

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 12/236 (5%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEK------TGKALP 220
           F  +    GL +  L        FV    + + L L     S            +G+   
Sbjct: 7   FVQWTGWLGLDYRFLLDAYERGSFVAGAWVTLQLCLCTMAGSLAVGVALAAALVSGRPWL 66

Query: 221 LLYISTFLI--FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                 F+      PTLV +       F    +     IGG+     F  + I +S +  
Sbjct: 67  AGPTRLFVEVTRNTPTLVQL----YCAFLVLNMLISEVIGGANPFTPFAWVVIVISLHKG 122

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            F AE +R+G+ AVP+  +EAA +LG + R+    V LP A+R  +P L +  + L+K +
Sbjct: 123 VFHAEALRAGIEAVPQVTLEAATSLGFSRRQRLWRVELPLAVRFALPSLVNNLIELVKMT 182

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           +LA A+   D+      I  Q    +E++++ +  +  LS ++      L A++ +
Sbjct: 183 ALASAIAVGDITYASILIWTQRDNVLELMILILLFFGLLSFVVNCLGRGLEARLRM 238


>gi|302386910|ref|YP_003822732.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302197538|gb|ADL05109.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 219

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 14/212 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              +I     +L   + L    L R       K++   YI   +    P L+ +   Y  
Sbjct: 19  MTLRISFLGILLSSAIGLL-CSLVRIIKIPVLKSIVNGYIE--VSRNTPLLIQLFFLY-- 73

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F       V          L+    +++AE  R+G+  VP  Q E+ ++LG
Sbjct: 74  ---------FGLPKIGVVLSSESCAVTGLAFLGGSYMAEAFRTGMEQVPVIQSESGLSLG 124

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT  +  R ++LPQA+ + +P   +  + L+K +S+  AV  ADL+ V   +I    +  
Sbjct: 125 LTKGQVFRHIILPQAVTTSVPVFCANIIFLIKETSVFSAVALADLMFVAKDLIGIYYKTD 184

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           E +L+ +  YL + + I+L  + +  ++   E
Sbjct: 185 EALLMLVAAYLIILLPISLLCSWIERRVRYAE 216



 Score = 43.8 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 38/79 (48%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +    +Y    +     T  ++F G++ ++ IG L    R+    ++  I   Y+EV 
Sbjct: 1   MDFEFIRAYTPLYIEAAGMTLRISFLGILLSSAIGLLCSLVRIIKIPVLKSIVNGYIEVS 60

Query: 137 RNIPPLVVIFFLYKSVLSV 155
           RN P L+ +FFLY  +  +
Sbjct: 61  RNTPLLIQLFFLYFGLPKI 79


>gi|330900315|gb|EGH31734.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 175

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 14/189 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +          R        +    ++ + S  +G V+ L A   +     K  + +  +
Sbjct: 1   MNYQLNFDAVWRDFPSLLAGLGLGLELALISIAIGCVIGL-ANAFALLSRYKALRIVASI 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           Y++  ++   P LVLI L Y           F   G      +  S  + LS Y  A++ 
Sbjct: 60  YVT--VVRNTPILVLILLIY-----------FALPGLGIRLDKLASFIVTLSLYAGAYLT 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+GL+++ +GQ EA +A+GL   +    +++P  +R+++P L++ +++L K++SLA 
Sbjct: 107 EVFRAGLLSIHKGQREAGLAIGLGEWQVRAYIIVPVMLRNVLPALSNNFISLFKDTSLAA 166

Query: 343 AVGFADLVS 351
           A+   +L  
Sbjct: 167 AIAVPELTY 175


>gi|319758451|gb|ADV70393.1| ABC-type amino acid transport system, permease component
           [Streptococcus suis JS14]
          Length = 219

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 77/195 (39%), Gaps = 22/195 (11%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + R+      K +  +YI                      + P L     +     
Sbjct: 39  MILAIMRNGKNPIFKWIATIYIEFVR------------------NVPNLLWIFTVFLVFQ 80

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
                +   A + +T   +AEI+R GL A+  GQ EA ++ G T  +    +++PQA+R 
Sbjct: 81  MKSTPAGITAFTIFTTPAMAEIIRGGLNAIGPGQTEAGLSQGFTPVQIMVYIIMPQAIRK 140

Query: 323 IIPPLTSQYLNLLKNSS-LAVAVGFADLVSVGGTIINQTG---QAIEIILIWMFIYLSLS 378
           ++P + SQ + ++K++S L   +   +L      ++ +     Q   + ++   IY S++
Sbjct: 141 MLPAIISQIVTVIKDTSFLYSVIALQELFGSSQILMGRYFEAEQVFALYIMVALIYFSIN 200

Query: 379 IMIALFMNRLNAKIA 393
             I+     +    A
Sbjct: 201 FAISSLSRYVAKSWA 215



 Score = 40.7 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T +++   +I + + G ++   R   N +  WI  +Y+E  RN+P L+ IF +
Sbjct: 16  LWSGLKLTLYISSISVILSILFGMILAIMRNGKNPIFKWIATIYIEFVRNVPNLLWIFTV 75

Query: 149 YKSV 152
           +   
Sbjct: 76  FLVF 79


>gi|300718307|ref|YP_003743110.1| Amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
 gi|299064143|emb|CAX61263.1| Amino acid ABC transporter, permease protein [Erwinia billingiae
           Eb661]
          Length = 235

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 92/217 (42%), Gaps = 10/217 (4%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I   + + G  L++ AT L R         L  LY+S      +   + +A  Y 
Sbjct: 15  PLTLAIMFVALIAGFFLAIVATTL-RVRRLPVLSQLADLYVSYARSVPVVLQLFVAF-YG 72

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L       G  +FI  +      ++  + LS Y   +++E++R   +AV RGQ +AA ++
Sbjct: 73  LPLVVSGFGLADFITAN------IASMVGLSLYHGGYLSEVMRPAYLAVERGQHDAADSM 126

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-- 361
           G T R+    ++ PQA+   +P   +  + L+ N +L + +G AD+++    I+ +    
Sbjct: 127 GYTFRQKLTRIIGPQAVHIALPGYGNSIIYLIHNVALVMYIGAADVMATAHLIMERDYNQ 186

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
                 L+   IY  L +   L +     + A    K
Sbjct: 187 YQFGTYLVLAVIYSLLCLAAWLIVRFFEMRHAKYTSK 223


>gi|159044767|ref|YP_001533561.1| putative polar amino acid ABC transporter [Dinoroseobacter shibae
           DFL 12]
 gi|157912527|gb|ABV93960.1| putative polar amino acid ABC transporter [Dinoroseobacter shibae
           DFL 12]
          Length = 268

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 79/220 (35%), Gaps = 17/220 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +   A   +F F L   ++L      +       +     +I  F+  G P  +   L
Sbjct: 42  WNVYFGAFALLFGFFLATAVAL-----GKASDRAVLRVPADWFI--FVFRGSPLFIQFFL 94

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y L      +           +  +    + L   T+A+  EI    L +VP+G +EAA
Sbjct: 95  AYFLFIQLKAVSPAF----DPFTSAWAGALVVLFLNTSAYAGEIFYGALRSVPKGDLEAA 150

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGG 354
            A GL      R V  P  +R   P  T++ + L   ++L    GF       D +    
Sbjct: 151 DAYGLAGWTKFRRVTWPTMLRLAWPSYTNEAIFLFHATTLVFFAGFPAFQQRGDALYYAQ 210

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              ++T        I  F ++ L++ +    + +N ++  
Sbjct: 211 YFADKTFNPFIPYPIVAFYFILLTLAVIFVFSLINRRLNR 250


>gi|315639020|ref|ZP_07894190.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
 gi|315480932|gb|EFU71566.1| His/Glu/Gln/Arg/opine ABC superfamily ATP binding cassette
           transporter, membrane protein [Campylobacter upsaliensis
           JV21]
          Length = 218

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 14/204 (6%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
            SFV  ++ S     L      K      L       +  +P LV + + Y         
Sbjct: 23  ISFVSIVITSFGGLLLGILMSFKNPYIYALCRFGLEFVRVMPLLVWLFIVYFGF------ 76

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                           +  I  S + +  + ++VRS L ++P+ Q E+A ALGLT  +A 
Sbjct: 77  ----SRWLGLDLSSVAASIIVFSIWGSLEMMDLVRSSLQSIPKHQYESAAALGLTPLQAY 132

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN----QTGQAIEII 367
             +++PQA+R + P   +    ++K+++ A  +G  +LV VG  II            I 
Sbjct: 133 IYIIIPQALRRLTPLSMNLLTRMIKSTTFAYLIGAVELVKVGQQIIEFHNQNDFAPFVIY 192

Query: 368 LIWMFIYLSLSIMIALFMNRLNAK 391
            +   +Y  +   ++L+   L  K
Sbjct: 193 GLIFMLYFVICYPVSLYAKNLEKK 216



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 35/88 (39%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  ++F  ++  +  G L+G      N  +  +CR  +E  R +P LV +F +Y  
Sbjct: 16  GLFITLEISFVSIVITSFGGLLLGILMSFKNPYIYALCRFGLEFVRVMPLLVWLFIVYFG 75

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFP 179
               L +   S+     +F     L   
Sbjct: 76  FSRWLGLDLSSVAASIIVFSIWGSLEMM 103


>gi|116072944|ref|ZP_01470206.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. RS9916]
 gi|116068249|gb|EAU74001.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. RS9916]
          Length = 340

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 30/226 (13%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSRHFHEKTGKALPLLYISTF 227
           R     +LT+   A     +  +G++L+L         RLS   +    +A+PL+ +  F
Sbjct: 126 RDWGGLSLTLLLTACSAALALPIGVLLALGRNSDLPVLRLSSRLYIDLMRAVPLIAVLFF 185

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
                  L+ + L  QL  ++ +     F   +                      E VR 
Sbjct: 186 ----GQLLIPLFLPMQLEINRVLRAVVAFALFAAAYVA-----------------EDVRG 224

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL ++P  Q EAA ALGL+  ++ RLV+LPQA+R  IP LT+Q + LL+N+SL   +G  
Sbjct: 225 GLQSIPSTQTEAAAALGLSPIQSLRLVVLPQALRIAIPALTNQAIGLLQNTSLMALLGLV 284

Query: 348 DLVSVGGTIINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +L+ +G +++      G+ +E+ +    +Y      +AL   R+  
Sbjct: 285 ELLGIGRSLLANPAFIGRHLEVYVWLGGLYWMFCTAMALLARRIER 330


>gi|328463781|gb|EGF35338.1| amino acid ABC transporter permease [Lactobacillus helveticus MTCC
           5463]
          Length = 225

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  +        + + T+  I   S  +G+++      L R    K  + +  +Y+  F 
Sbjct: 8   VLFSGSNFDRLLVGLWTSIWIAALSIFIGLLIGTVFGVL-RTMPNKIIRCILRVYMEIFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I     L+     Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  ILPSVVLL-----YLVYYILPRSLHINW-------PGTWMAVLAFSLWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP  Q E+ +ALGL+  +    VLLPQA +  +P   +    ++K +S+ + +   D
Sbjct: 115 LQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLELPATINLATRVIKTTSILMLISVMD 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           +++VG  II    Q        +  +  F Y  L   ++++   L AK
Sbjct: 175 VINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILDYPLSVWAKSLMAK 222



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 45/97 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +      S    +LVG   + W+A   +    +IGT+ G  R   NK++  I RVY+E+F
Sbjct: 6   INVLFSGSNFDRLLVGLWTSIWIAALSIFIGLLIGTVFGVLRTMPNKIIRCILRVYMEIF 65

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R +P +V+++ +Y  +   L I      +    F   
Sbjct: 66  RILPSVVLLYLVYYILPRSLHINWPGTWMAVLAFSLW 102


>gi|332160645|ref|YP_004297222.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604515|emb|CBY26013.1| amino acid ABC transporter, permease protein [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664875|gb|ADZ41519.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 227

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 13/217 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS   +T++  A   +    LGIV +      +    +   + +   Y+   ++   P +
Sbjct: 18  LSGLLITIELTAIATLGGIALGIVGAAIRCSHTSRLDKVILRRVWGGYVE--IVRNTPFV 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + + F  P LG     G         +  +A++    A+  EI+R+G+ A  +G
Sbjct: 76  VQL---FFIVFGLPALGLKLSAGQ--------AAVLAMTINLGAYSTEIIRAGIQASAKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA   LGL+  +    V+LP +++ I P L SQ + ++  S++   V F +L      
Sbjct: 125 QWEAGRVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSFEELTFAANL 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I ++T  + E+ L+   +YL LSI +   +     + 
Sbjct: 185 IQSRTFLSFEVYLVTTLLYLLLSIAMRQLLLAAGRRF 221



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 5/118 (4%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN-----KLVAWICRV 131
           + +++   Y   +L G + T  L     +    +G +  A R S        ++  +   
Sbjct: 5   LNFSALWPYLPELLSGLLITIELTAIATLGGIALGIVGAAIRCSHTSRLDKVILRRVWGG 64

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           YVE+ RN P +V +FF+   + ++             M +N    S   +     A  
Sbjct: 65  YVEIVRNTPFVVQLFFIVFGLPALGLKLSAGQAAVLAMTINLGAYSTEIIRAGIQASA 122


>gi|205355342|ref|ZP_03222113.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205346576|gb|EDZ33208.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 218

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 17/226 (7%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N   L      +    +I   S ++  +  LF   L       + K   +       +  
Sbjct: 6   NTDTLLRLWQGLFVTLEISFISTIITSIGGLFLGILM------SFKNTYIYAFCRLGLEF 59

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           +  + L+   + ++F  P    ++    S          I  S +    + ++VR  L +
Sbjct: 60  VRVMPLLVWFFVVYFGFPRWFGWDLSSVSV-------AIIVFSIWGCFEMMDLVRVSLQS 112

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +P+ Q E+A +LGL   ++   +++PQAMR + P   +    ++K+++ A  +G  +LV 
Sbjct: 113 IPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNLLTRMIKSTTFAYLIGAVELVK 172

Query: 352 VGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           VG  II            I  +  FI+  L   I L+  +L  K +
Sbjct: 173 VGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS 218



 Score = 37.2 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 63/209 (30%), Gaps = 12/209 (5%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++   +  +    +  G   T  ++F   I  +I G  +G      N  +   CR+ +E 
Sbjct: 1   MLELLNTDTLLR-LWQGLFVTLEISFISTIITSIGGLFLGILMSFKNTYIYAFCRLGLEF 59

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN----------RGLSFPTLTMDT 185
            R +P LV  F +Y            S+ +   +F               L         
Sbjct: 60  VRVMPLLVWFFVVYFGFPRWFGWDLSSVSVAIIVFSIWGCFEMMDLVRVSLQSIPKHQYE 119

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LIFGLPTLVLIALKYQL 244
           +A     + V   V  +    + R           ++  +TF  + G   LV +  +   
Sbjct: 120 SASSLGLNTVQSFVYIIIPQAMRRLTPMSMNLLTRMIKSTTFAYLIGAVELVKVGQQIIE 179

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIAL 273
             ++     F   G        +   I L
Sbjct: 180 FHNRNDFAPFIIYGLIFFIFFILCYPITL 208


>gi|126735294|ref|ZP_01751040.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. CCS2]
 gi|126715849|gb|EBA12714.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseobacter sp. CCS2]
          Length = 268

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 19/264 (7%)

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA 204
              +    L    I +  +            L    +  +    I        +  ++  
Sbjct: 4   WETIADYALRSQGIGERLLPRTDFTLCQQFTLIGSGMIWNIYFGIVALCSGFFLATAVAM 63

Query: 205 TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSP 264
            + +R+   +            F+  G P  +     Y +      +  F       ++ 
Sbjct: 64  GKAARNPWVRKP-----AEWFIFVFRGSPLFIQFFFAYFVFLSLKDVSSFF----DPLTS 114

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            +    + L   TAA+  EI    L ++P+G  EAA A GL+     R V+ P  +R   
Sbjct: 115 AWAGALVVLFLNTAAYSGEIFYGALQSIPKGDTEAADAYGLSGWSRFRRVIWPTMLRLAW 174

Query: 325 PPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAIEIILIWMFIYLSLS 378
           P  T++ + L   ++L    GF       D +       ++T        I    ++ L+
Sbjct: 175 PAYTNEAIFLFHATTLVFFSGFPATQQRGDALYYANYFADKTFNPFIPYPILAGYFIVLT 234

Query: 379 IMI----ALFMNRLNAKIALKEKK 398
           +++     L  NRLN  +    ++
Sbjct: 235 LVVIGIFGLVNNRLNRHLPQDARR 258


>gi|323466209|gb|ADX69896.1| Amino acid ABC transporter, permease protein [Lactobacillus
           helveticus H10]
          Length = 224

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  +        + + T+  I   S  +G+++      L R    K  + +  +Y+  F 
Sbjct: 8   VLFSGSNFDRLLVGLWTSIWIAALSIFIGLLIGTVFGVL-RTMPNKIIRCILRVYMEIFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I     L+     Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  ILPSVVLL-----YLVYYILPRSLHINW-------PGTWMAVLAFSLWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP  Q E+ +ALGL+  +    VLLPQA +  +P   +    ++K +S+ + +   D
Sbjct: 115 LQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLELPATINLATRVIKTTSILMLISVMD 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           +++VG  II    Q        +  +  F Y  L   ++++   L AK
Sbjct: 175 VINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILDYPLSVWAKSLMAK 222



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 45/97 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +      S    +LVG   + W+A   +    +IGT+ G  R   NK++  I RVY+E+F
Sbjct: 6   INVLFSGSNFDRLLVGLWTSIWIAALSIFIGLLIGTVFGVLRTMPNKIIRCILRVYMEIF 65

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R +P +V+++ +Y  +   L I      +    F   
Sbjct: 66  RILPSVVLLYLVYYILPRSLHINWPGTWMAVLAFSLW 102


>gi|295099883|emb|CBK88972.1| amino acid ABC transporter membrane protein, PAAT family (TC
           3.A.1.3.-) [Eubacterium cylindroides T2-87]
          Length = 186

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           ++       +A+   Y+   +I G P L+ I + + +             G       ++
Sbjct: 45  AKRSRFFILRAIGNFYVE--IIRGTPMLLQILMLFSVVPSIYT----AITGNVLRINVYL 98

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
              IA+S  + A+  E++RSG+  V +GQ EA   LGL+  +  +LV+LPQA + I+PP+
Sbjct: 99  IGIIAMSINSGAYSTELIRSGINGVDKGQWEACETLGLSSWQTMKLVILPQAFKLIVPPV 158

Query: 328 TSQYLNLLKNSSLAVAVGFADLVS 351
            S+++ L+K+SSL   +G  +L+ 
Sbjct: 159 ISEFITLIKDSSLTSCIGAIELLK 182


>gi|99081555|ref|YP_613709.1| amino acid ABC transporter permease [Ruegeria sp. TM1040]
 gi|99037835|gb|ABF64447.1| Amino acid ABC transporter permease protein 3-TM region
           His/Glu/Gln/Arg/opine [Ruegeria sp. TM1040]
          Length = 268

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 85/220 (38%), Gaps = 17/220 (7%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +   A      F     L++     +++ H++  +A    +I  F+  G P  +    
Sbjct: 42  WNVYFGAIAIFTGFFFANALAV-----AKNSHKRWLRAPANGFI--FVFRGSPLFIQFFF 94

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y +      +          +S  ++   I L   T+A+ AEI    L ++P+G +EAA
Sbjct: 95  AYFVFLSLKSVSPIF----DPLSAAWLGALIVLFLNTSAYSAEIFYGALRSIPKGDLEAA 150

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGG 354
            A GL+     R V+ P  MR   P  T++ + L   ++L    GF       D +    
Sbjct: 151 DAYGLSGWSRFRRVIWPTMMRLAWPAYTNEAIFLFHATTLVYFSGFPAWRQKGDALYYAN 210

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              ++T        I  F ++ L++ I      +N ++  
Sbjct: 211 YFADKTFNPFVPYPILAFYFILLTLAIIAVFGMINTRLNR 250


>gi|331005100|ref|ZP_08328503.1| ABC polar amino acid transporter inner membrane protein [gamma
           proteobacterium IMCC1989]
 gi|330421069|gb|EGG95332.1| ABC polar amino acid transporter inner membrane protein [gamma
           proteobacterium IMCC1989]
          Length = 173

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L     +   F  I G  + P F S  I LS YT+A +A++  SG+ AVP     A+ +
Sbjct: 23  PLIIQLILFDSFIAIAGFPL-PAFWSGTIILSIYTSALVAQVALSGIEAVPLTTRRASRS 81

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T+ +  R ++ P  +R+++P      L++LK+S+L   +G+ +L+     +I +T +
Sbjct: 82  LGMTYWQDMRYIVWPIGLRAVLPAWVGVALSVLKDSALVSVIGYTELLKASQILITRTAE 141

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              ++ +    Y +LS  I+   + +  +
Sbjct: 142 TFTVLAVAGLFYFALSYPISKASSYIEKR 170


>gi|225025466|ref|ZP_03714658.1| hypothetical protein EIKCOROL_02364 [Eikenella corrodens ATCC
           23834]
 gi|224941750|gb|EEG22959.1| hypothetical protein EIKCOROL_02364 [Eikenella corrodens ATCC
           23834]
          Length = 222

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 20/214 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK-Y 242
              AKI + S  L  VL      L R  H       PL+     L   +  +V I +  +
Sbjct: 20  WLTAKISLISVALSCVLGTLFGLLMRVRH-------PLVRFVCALYLEMVRIVPILVWLF 72

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L+F        +  G                 +    + ++VR  L ++ + Q+E+A A
Sbjct: 73  VLYFGLSAWTDIHLSG-------VWVCIWVFVVWGTGEMGDLVRGALESIEKHQVESAKA 125

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LGL  R+    + LPQ+++  +P   + +  ++K SSLA  +G  ++V VG  II  +  
Sbjct: 126 LGLNRRQVFWYIELPQSVQRALPGAINLFTRMVKTSSLAALIGVVEVVKVGQQIIENSLL 185

Query: 363 AIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
            +      +  +   +Y      ++L    L  K
Sbjct: 186 TMPNASFWVYGLIFILYFLCCWPLSLLAGYLEKK 219



 Score = 43.4 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 45/98 (45%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ +      A  +  G   T  ++   +  + ++GTL G      + LV ++C +Y+E+
Sbjct: 2   VLEWLFAGQNAARLAQGLWLTAKISLISVALSCVLGTLFGLLMRVRHPLVRFVCALYLEM 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            R +P LV +F LY  + +   I    + +   +F+  
Sbjct: 62  VRIVPILVWLFVLYFGLSAWTDIHLSGVWVCIWVFVVW 99


>gi|294670248|ref|ZP_06735141.1| amino acid ABC transporter, permease protein [Neisseria elongata
           subsp. glycolytica ATCC 29315]
 gi|291307985|gb|EFE49228.1| amino acid ABC transporter, permease protein [Neisseria elongata
           subsp. glycolytica ATCC 29315]
          Length = 222

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
             A+I + S VL  V       + R    +  + +  LY+ T  I  +P LV +   Y  
Sbjct: 21  LTAQISLISVVLSCVFGTLFGLMLRA-DNRIVRFIGRLYLETVRI--VPILVWLFGFYF- 76

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                    F    G  +   ++ +++    +  A + ++VR  L ++ + Q+E+ +A+G
Sbjct: 77  --------GFAAWTGIHIDGLWVCIWV-FVLWGVAEMGDLVRGALESIEKHQVESGLAIG 127

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L+  +  R + LPQ++R ++P   + +  ++K SSLA  +G  ++V VG  II  +   +
Sbjct: 128 LSRWQVFRFIELPQSVRRVLPGSINLFTRMIKTSSLAALIGVIEVVKVGQQIIENSLLTM 187

Query: 365 E-----IILIWMFIYLSLSIMIALFMNRLNAK 391
                 +  +   +Y      ++L+  RL  K
Sbjct: 188 PNASFWVYGLIFMLYFLCCWPLSLWAARLEHK 219



 Score = 43.8 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 46/98 (46%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           ++ +  +   A  +  G + T  ++   ++ + + GTL G    + N++V +I R+Y+E 
Sbjct: 2   VLDWLFEGQNAARLGKGLLLTAQISLISVVLSCVFGTLFGLMLRADNRIVRFIGRLYLET 61

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            R +P LV +F  Y    +   I    + +   +F+  
Sbjct: 62  VRIVPILVWLFGFYFGFAAWTGIHIDGLWVCIWVFVLW 99


>gi|259418482|ref|ZP_05742400.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
 gi|259345877|gb|EEW57721.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Silicibacter sp. TrichCH4B]
          Length = 268

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 15/232 (6%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLF---ATRLSRHFHEKTGKALPLLYISTFL 228
           ++  L    + + +     V+  V+ IV   F   A  ++++  ++  ++    +I  F+
Sbjct: 25  SDFTLCDQFVLIGSGLIWNVYFGVIAIVTGFFFANALAVAKNSPKRWLRSPANGFI--FV 82

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
             G P  +     Y +      +          +S  ++   I L   T+A+ AEI    
Sbjct: 83  FRGSPLFIQFFFAYFVFLSLKSVSPIF----DALSAAWLGALIVLFLNTSAYSAEIFYGA 138

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA- 347
           L ++P+G +EAA A GL+     R V+ P  MR   P  T++ + L   ++L    GF  
Sbjct: 139 LRSIPKGDLEAADAYGLSGWSRFRRVIWPTMMRLAWPSYTNEAIFLFHATTLVFFSGFPA 198

Query: 348 -----DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                D +       ++T        I  F ++ L+++I      +N ++  
Sbjct: 199 WRQKGDALYYANYFADKTFNPFVPYPILAFYFILLTLVIIGLFGVINTRLNR 250



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 23/64 (35%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +   +     ++        +   + S  + +      ++ VFR  P  +  FF Y  
Sbjct: 39  GLIWNVYFGVIAIVTGFFFANALAVAKNSPKRWLRSPANGFIFVFRGSPLFIQFFFAYFV 98

Query: 152 VLSV 155
            LS+
Sbjct: 99  FLSL 102


>gi|257461204|ref|ZP_05626302.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter gracilis RM3268]
 gi|257441578|gb|EEV16723.1| ABC transporter membrane-spanning permease - glutamine transport
           [Campylobacter gracilis RM3268]
          Length = 217

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 99/231 (42%), Gaps = 18/231 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F    +   +    LT+       + S ++G + +L         +++     PL+
Sbjct: 1   MDFDFIAKFSPMFVKAGVLTLKLAFYGILLSIIIGFICTLIK-------YKRLPLLSPLV 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                L    P L+ +   + L++  P L              F    + L+    ++++
Sbjct: 54  SAYIELSRNTPLLIQL---FFLYYGLPKL--------GVQISGFTCAIVGLAFLGGSYMS 102

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R G  A+ + Q+E+A++LGL+  +    V+LP+A    +P +++  + LLK +S+  
Sbjct: 103 ESFRLGFEAIKKSQIESAMSLGLSEAQIVFYVVLPRAFAIALPSISANIIFLLKETSIVS 162

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            V  ADLV     +I    +  E + +    YL + + ++L +  L  ++A
Sbjct: 163 IVALADLVYAAKDVIGLYYKTNEALFMLSVSYLIIILPLSLALTLLEKRLA 213



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 42/93 (45%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + +   + ++   +   V T  LAF G++ + IIG +    +     L++ +   Y+E+ 
Sbjct: 1   MDFDFIAKFSPMFVKAGVLTLKLAFYGILLSIIIGFICTLIKYKRLPLLSPLVSAYIELS 60

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGM 169
           RN P L+ +FFLY  +  +            G+
Sbjct: 61  RNTPLLIQLFFLYYGLPKLGVQISGFTCAIVGL 93


>gi|149912071|ref|ZP_01900662.1| amino acid ABC transproter, permease protein [Moritella sp. PE36]
 gi|149804867|gb|EDM64904.1| amino acid ABC transproter, permease protein [Moritella sp. PE36]
          Length = 189

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 17/156 (10%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ-LH 245
               VF+ ++ I L++      R F       L +L+IS F   G P LV + L Y  L 
Sbjct: 3   LIGVVFALIIAIGLAVV-----RTFKVPVLNQLAMLFISFF--RGTPLLVQLFLLYYGLP 55

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
              P+L              F +  I L+ + AA+ AE +R+ ++AV + QMEAA+++G+
Sbjct: 56  RVFPIL---------IHMDAFTASVIGLTLHFAAYKAESIRAAIMAVDKSQMEAALSIGM 106

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           T  +A R ++LPQA R   P L + +++++K++SLA
Sbjct: 107 TTSQAMRRIVLPQAARIATPSLMNYFIDMIKSTSLA 142



 Score = 41.1 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 35/93 (37%)

Query: 99  LAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPI 158
           +A  G++ A II   +   R     ++  +  +++  FR  P LV +F LY  +  V PI
Sbjct: 1   MALIGVVFALIIAIGLAVVRTFKVPVLNQLAMLFISFFRGTPLLVQLFLLYYGLPRVFPI 60

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFV 191
             H       +       +         A + V
Sbjct: 61  LIHMDAFTASVIGLTLHFAAYKAESIRAAIMAV 93


>gi|119386411|ref|YP_917466.1| polar amino acid ABC transporter, inner membrane subunit
           [Paracoccus denitrificans PD1222]
 gi|119377006|gb|ABL71770.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Paracoccus denitrificans PD1222]
          Length = 275

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 85/219 (38%), Gaps = 12/219 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
            N      +  LG  L+     +++    +  +     +I  FL  G P  +   L Y+L
Sbjct: 43  WNVYFAALAVFLGFFLANLL-AVAKASGNRWARKPAEWFI--FLFRGSPLFIQFFLAYEL 99

Query: 245 HFDKP---VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
               P   +      +  S ++  +    + L   TAA+ AEI    L  +P+G++EAA 
Sbjct: 100 LVQLPRAGIDILGITVQTSWMTRAWAGALLVLVLNTAAYSAEIFYGALRNLPKGELEAAD 159

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGT 355
           A G+      R V+ P AMR   P  T++ + L   ++L    GF       D +     
Sbjct: 160 AYGMAGWTRYRRVVWPTAMRLAWPAYTNEAIFLFHATTLVFFSGFPAYQQRGDALYYANY 219

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++T        I    ++ L+I +      +N ++  
Sbjct: 220 FADKTFNPFIAYPIVAGYFVLLTICLIALFGMVNRRLNR 258


>gi|166032311|ref|ZP_02235140.1| hypothetical protein DORFOR_02014 [Dorea formicigenerans ATCC
           27755]
 gi|166028034|gb|EDR46791.1| hypothetical protein DORFOR_02014 [Dorea formicigenerans ATCC
           27755]
          Length = 219

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 95/224 (42%), Gaps = 12/224 (5%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF-HEKTGKALPLLYISTFLI 229
           +N   +       +  A + V   + G++ ++    +     +EK   A  ++ +   L 
Sbjct: 1   MNWDFIIKYLPMYERAALLTVKLGLAGVICAIIVGLICAIIQYEKVPVARQIVAVYIELS 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P LV +   Y   +  P +       G    P+       L+    +++AE  RSGL
Sbjct: 61  RNTPLLVQLFFIY---YGLPKI-------GIQTDPQ-TCGIAGLTFLGGSYMAEAFRSGL 109

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
             V   Q E+A++LG+   +  R V+LPQA    +P   +  + LLK +S+  AV   DL
Sbjct: 110 ETVAAIQTESALSLGMNRLQVMRYVVLPQAFSISVPAFMANVIFLLKETSVFSAVSLMDL 169

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +     +I    +  E + + +  YL + + I++  + L  ++ 
Sbjct: 170 MFTAKDLIGLYYKTTESLFLLVVFYLLILLPISILGSLLERRLR 213



 Score = 45.7 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 4/142 (2%)

Query: 94  VNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVL 153
           + T  L  +G+I A I+G +    +     +   I  VY+E+ RN P LV +FF+Y  + 
Sbjct: 18  LLTVKLGLAGVICAIIVGLICAIIQYEKVPVARQIVAVYIELSRNTPLLVQLFFIYYGLP 77

Query: 154 SVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHE 213
            +    D       G+                     V +      LSL   RL    + 
Sbjct: 78  KIGIQTDPQTCGIAGLTFLGGSYMAEAFRSGLE---TVAAIQTESALSLGMNRLQVMRYV 134

Query: 214 KTGKALPLLYISTFLIFGLPTL 235
              +A   + +  F+   +  L
Sbjct: 135 VLPQAFS-ISVPAFMANVIFLL 155


>gi|260550582|ref|ZP_05824791.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           RUH2624]
 gi|299770573|ref|YP_003732599.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. DR1]
 gi|260406293|gb|EEW99776.1| amino acid ABC transporter membrane protein [Acinetobacter sp.
           RUH2624]
 gi|298700661|gb|ADI91226.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. DR1]
          Length = 221

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F      R +     T         FS + G V  +              KAL  LY+
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIM-----TSKNIVVKALCRLYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I     ++++   +   F      QF+               +    +  A + ++
Sbjct: 60  EAIRIIP---ILVLLFVFYFGFATWFNWQFS---------AMWVCVVVFVLWGTAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++K SSLAV +
Sbjct: 108 VRAAITSIDQHQRDSAYALGLTHVQALVYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLI 167

Query: 345 GFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           G  +++ VG  II  +   +      I      +Y  +   ++     L  
Sbjct: 168 GVVEVIKVGQQIIENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEK 218



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 46/97 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  
Sbjct: 3   LDYLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R IP LV++F  Y    +       ++ +   +F+  
Sbjct: 63  RIIPILVLLFVFYFGFATWFNWQFSAMWVCVVVFVLW 99


>gi|171316137|ref|ZP_02905362.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
 gi|171098741|gb|EDT43535.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria MEX-5]
          Length = 228

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 95/214 (44%), Gaps = 11/214 (5%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T   +   + VLG+ + +              +  PL+      I   P +V +   +  
Sbjct: 23  TTFALTAVATVLGVSIGVLGAASYSADARAAVRLRPLVGAYVEAIRNTPFVVQLFFIF-- 80

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            F  P L             E+ +  +A++    A+  EIVR+G+ AVP+G +EAA AL 
Sbjct: 81  -FGLPAL--------GVHIDEYTAATLAMTLNLGAYSVEIVRAGVAAVPKGHLEAAAALA 131

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           ++  +  R V+LPQA+  + P L SQ +  +  S++   +  ADL      I ++  ++ 
Sbjct: 132 MSRAQMLRHVVLPQALAKVFPALASQIVITMLGSAVVSQISVADLTYAASYIQSRNFRSF 191

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           E   +    YL++++++   +  +  ++  +  +
Sbjct: 192 ETYFVIALAYLAMALLLRAVLGSMGRRLFSRRVR 225


>gi|193084368|gb|ACF10024.1| glutamine transport system permease protein glnP [uncultured marine
           group II euryarchaeote AD1000-18-D2]
          Length = 561

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 90/233 (38%), Gaps = 19/233 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  +         + +       V  F +G++L+         F   +   + L+     
Sbjct: 337 GDGIEASQWGGLFVNLIVATAGCVLGFGIGVILAFGRQSDQPFFSVPSVALIELVRSGPL 396

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +         L + +     ++  F        + + M + +    +   +IAE++R 
Sbjct: 397 ICW---------LWFAVFLMPDLMDPFY------NAEDIMRMLLMFGIFGGCYIAEVLRG 441

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL AV  GQ EAA+ALGL+  +    V LP A+R+ +P + S ++ L K+++L   +   
Sbjct: 442 GLQAVDSGQKEAALALGLSPFQTKMTVELPNAVRTTLPSIVSVFIGLWKDTTLLFIINIL 501

Query: 348 DLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           D   +   +        G  +E + +   ++   +  ++     +   + L  
Sbjct: 502 DFFKLAKDLPATDLRFLGNFLEPLYVTAIVFWVFAFYLSRVSMGIEKNLGLVR 554



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 54/152 (35%), Gaps = 4/152 (2%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G      +A +G +    IG ++  GR S     +      +E+ R+ P +  ++F    
Sbjct: 347 GLFVNLIVATAGCVLGFGIGVILAFGRQSDQPFFSVPSVALIELVRSGPLICWLWFAVFL 406

Query: 152 VLSVL-PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLFATRL 207
           +  ++ P  +   ++   +     G  +    +    +          L + LS F T++
Sbjct: 407 MPDLMDPFYNAEDIMRMLLMFGIFGGCYIAEVLRGGLQAVDSGQKEAALALGLSPFQTKM 466

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           +          LP +      ++   TL+ I 
Sbjct: 467 TVELPNAVRTTLPSIVSVFIGLWKDTTLLFII 498


>gi|89897435|ref|YP_520922.1| hypothetical protein DSY4689 [Desulfitobacterium hafniense Y51]
 gi|219670586|ref|YP_002461021.1| polar amino acid ABC transporter inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|89336883|dbj|BAE86478.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540846|gb|ACL22585.1| polar amino acid ABC transporter, inner membrane subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 225

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 22/234 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F      R L    +T+       + S   GI   L  T  S     K  K L  LY+
Sbjct: 8   MLFTSQNIVRLLEGLLVTVRIALIAILISACTGIAFGLLMTMKS-----KLIKVLCRLYL 62

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
             F I  +P LV + + Y        +     +           + I    +  A + +I
Sbjct: 63  EAFRI--IPVLVWLFIGYFGITSVFAIHLEGELI----------VIIVFILWGTAEMGDI 110

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR  L ++PR Q ++  ALGL+  +  R VL+PQA+R ++P   +    ++K +SLAV +
Sbjct: 111 VRGALESLPRHQSDSGKALGLSFGQLYRYVLIPQAVRRMLPATINLATRMVKTTSLAVLI 170

Query: 345 GFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAKIA 393
           G  +++ VG  +I      +      I  +   +Y  +   ++    RL AK +
Sbjct: 171 GVVEILKVGQQMIENARFTVPTASFWIYGLIFILYFIMCYPLSRLAKRLEAKWS 224



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ +   G   G      +KL+  +CR+Y+E FR IP LV +F  
Sbjct: 18  LLEGLLVTVRIALIAILISACTGIAFGLLMTMKSKLIKVLCRLYLEAFRIIPVLVWLFIG 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + SV  I     ++   +F+  
Sbjct: 78  YFGITSVFAIHLEGELIVIIVFILW 102


>gi|294679056|ref|YP_003579666.1| polar amino acid ABC transporter permease [Rhodobacter capsulatus
           SB 1003]
 gi|294477872|gb|ADE87259.1| polar amino acid ABC transporter, permease protein [Rhodobacter
           capsulatus SB 1003]
          Length = 243

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/206 (30%), Positives = 93/206 (45%), Gaps = 17/206 (8%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S V+ I  +L A  +S     KT     L  I   L+  L  L L+     ++F  P+  
Sbjct: 22  SLVVAIGGTLCAIAISAAVLAKT---RILRQIGFALMEVLRDLPLMVTVLLVYFMLPM-- 76

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                 G  + P F S   A+S +  A  A+I+R+GL +V  GQ E A A G +  K   
Sbjct: 77  -----TGLNLDP-FWSCCAAISIWGGANGAQILRAGLTSVSAGQRETAAAFGFSPLKGLL 130

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT------GQAIEI 366
           L+ LPQAM  IIPP  S    L++ +SL   VG  +L+  G  +I QT        A  +
Sbjct: 131 LITLPQAMPVIIPPYVSLLTALVQATSLGAVVGAQELLRSGQVVIEQTTILRGGSPAYLV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKI 392
               + +Y +L  +I+L   R+    
Sbjct: 191 YGSILVVYFALCTLISLIGGRIERHF 216



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   ++ G + T  ++    I  T+    + A  L+  +++  I    +EV R++P +V 
Sbjct: 7   YRVFLIAGLIETLKMSLVVAIGGTLCAIAISAAVLAKTRILRQIGFALMEVLRDLPLMVT 66

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +  +Y  +       D    
Sbjct: 67  VLLVYFMLPMTGLNLDPFWS 86


>gi|218510052|ref|ZP_03507930.1| probable amino acid ABC transporter, permease protein [Rhizobium
           etli Brasil 5]
          Length = 121

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/118 (33%), Positives = 66/118 (55%)

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
            A  +E  R+ L ++ R Q++A +ALGL  R     V+LPQA+   +P L S  ++L K 
Sbjct: 1   GAITSETFRASLKSIGREQLDACVALGLPQRVQVVNVVLPQAVLRAVPTLLSNCVSLFKE 60

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           S+L  AVG ADL+ VG  I N T + +E++ +   IY  ++  +   ++ +  +I  K
Sbjct: 61  SALVSAVGMADLMFVGQNISNNTARPVEVLTVVALIYFVIAFPLTRAVSLIEGRILKK 118


>gi|325121844|gb|ADY81367.1| putative glutamine transport system permease protein [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 221

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F      R +     T         FS + G V  +              KAL  LY+
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIM-----TSKNIVVKALCRLYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I     ++++   +   F      QF+               +    +  A + ++
Sbjct: 60  EAIRIIP---ILVLLFVFYFGFATWFNWQFS---------AMWVCVVVFVLWGTAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++K SSLAV +
Sbjct: 108 VRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLI 167

Query: 345 GFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           G  +++ VG  II  +   +      I      +Y  +   ++     L  
Sbjct: 168 GVVEVIKVGQQIIENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEK 218



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 46/97 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  
Sbjct: 3   LDYLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R IP LV++F  Y    +       ++ +   +F+  
Sbjct: 63  RIIPILVLLFVFYFGFATWFNWQFSAMWVCVVVFVLW 99


>gi|89053620|ref|YP_509071.1| binding-protein-dependent transport systems inner membrane
           component [Jannaschia sp. CCS1]
 gi|88863169|gb|ABD54046.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Jannaschia sp. CCS1]
          Length = 279

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 93/255 (36%), Gaps = 18/255 (7%)

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFH 212
           L  L I + ++            L    +  +    +   SF     ++L   + S  F 
Sbjct: 12  LRSLGIGERALPQGDVTLCEQVVLIGSGMIWNVYFGVLALSFGFFFAVALAVAKASPRFM 71

Query: 213 EKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPE------- 265
            +            FL  G P  +   + Y+     P LG    + G  +  E       
Sbjct: 72  LRKP-----AEWFIFLFRGSPLFIQFFMAYEAFVMLPRLGYEFELFGIAIEAETRWFARA 126

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           ++   I L C T+A+ AEI    L +VP+G +EAA A GLT     R +  P  MR   P
Sbjct: 127 WLGALIVLFCNTSAYAAEIFYGALRSVPKGDLEAADAYGLTGWTKFRRITFPTTMRLAWP 186

Query: 326 PLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAIEIILIWMFIYLSLSI 379
             T++ + +   ++L     F       D +       ++T        I    +++L++
Sbjct: 187 AYTNEAIFMFHATALVFFSSFPAFQQRGDALYYASYFADRTFNPFIPYPIVGAYFIALTL 246

Query: 380 MIALFMNRLNAKIAL 394
           ++      +N ++  
Sbjct: 247 LVIALFGAINRRLNR 261


>gi|254470909|ref|ZP_05084312.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
 gi|211960051|gb|EEA95248.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudovibrio sp. JE062]
          Length = 215

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 83/218 (38%), Gaps = 19/218 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L     T+   A   +F  VLGI L             +    +   Y+       L   
Sbjct: 16  LDGAGKTILLTALATLFGTVLGIALGWLRDS------SRLVGWIVAPYVDVTRSVPLIIQ 69

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
            ++   +      P+                 S  I LS Y   F +E+V++GL AV   
Sbjct: 70  FVLFNSFIAIAGYPL-------------DPLWSGTIVLSSYMGVFTSEVVQAGLRAVRPE 116

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
              A  +LG+ +    R V  P A+R + P      + L K+S+L   +G+ +L+     
Sbjct: 117 LRRAGRSLGMGYWTEMRYVTAPLALRVVFPSWIGLVIGLTKDSALVGVIGYIELLRASQI 176

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +IN+T +AI I+L     Y  +   I+ +   L  K+ 
Sbjct: 177 LINRTNEAILILLGAGLFYFIICYPISRYSQTLERKLK 214



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 1/106 (0%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             S    +L G   T  L     +  T++G  +G  R S+ +LV WI   YV+V R++P 
Sbjct: 8   SWSDLLFLLDGAGKTILLTALATLFGTVLGIALGWLRDSS-RLVGWIVAPYVDVTRSVPL 66

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           ++        +       D        +       +   +     A
Sbjct: 67  IIQFVLFNSFIAIAGYPLDPLWSGTIVLSSYMGVFTSEVVQAGLRA 112


>gi|225573415|ref|ZP_03782170.1| hypothetical protein RUMHYD_01607 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039225|gb|EEG49471.1| hypothetical protein RUMHYD_01607 [Blautia hydrogenotrophica DSM
           10507]
          Length = 215

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 11/210 (5%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
            KI V + ++ I+ S+    +         + L  +     +IF    L+++   + L +
Sbjct: 17  LKITVLASIVAILTSVVWGCVLASLRCLNLRVLSAVIRIYIVIFRNVPLLVVM--FFLFY 74

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P++            P      I+++    AF+AEI+R  +  +PRG++EAA +LGL 
Sbjct: 75  GLPLV--------GVDIPAVFCGVISITLNEGAFVAEIIRGSIKNMPRGEVEAAKSLGLG 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
                R +  P A R+ IP L  Q   ++K++SL   +   DL   G            I
Sbjct: 127 RLTIIRRITFPLAFRASIPMLLGQSSIVIKDTSLFSMIMIMDLTRAGSQYYATYFSPTAI 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             I   +Y+++ ++  +    +  K+ +K 
Sbjct: 187 W-IVGVVYVAIFLIFTIVGRVVENKVVVKR 215



 Score = 43.8 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 41/80 (51%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           ++   +L G   T   +   ++ + + G ++ + R    ++++ + R+Y+ +FRN+P LV
Sbjct: 8   NWLPDLLSGLKITVLASIVAILTSVVWGCVLASLRCLNLRVLSAVIRIYIVIFRNVPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
           V+FFL+  +  V        
Sbjct: 68  VMFFLFYGLPLVGVDIPAVF 87


>gi|57242451|ref|ZP_00370389.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           upsaliensis RM3195]
 gi|57016736|gb|EAL53519.1| glutamine ABC transporter, permease protein (glnP) [Campylobacter
           upsaliensis RM3195]
          Length = 218

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 11/181 (6%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           + +   +  I  F +  +  + L+   + ++F        +            +  I  S
Sbjct: 43  SLRNSYIYVICRFGLEFVRVMPLLVWLFIVYFGFSRWLGLDL-------SSVAASIIVFS 95

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            + +  + ++VRS L ++P+ Q E+A ALGLT  +A   +++PQA+R + P   +    +
Sbjct: 96  IWGSFEMMDLVRSSLQSIPKHQYESAAALGLTPLQAYIYIIIPQALRRLTPLSMNLLTRM 155

Query: 335 LKNSSLAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +K+++ A  +G  +LV VG  II            I  +   +Y  +   ++L+   L  
Sbjct: 156 IKSTTFAYLIGAVELVKVGQQIIEFHNQNDFAPFVIYGLIFMLYFVICYPVSLYARTLEK 215

Query: 391 K 391
           K
Sbjct: 216 K 216


>gi|239503578|ref|ZP_04662888.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii AB900]
          Length = 221

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F      R +     T         FS + G V  +              KAL  LY+
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIM-----TSKNIVVKALCRLYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I     ++++   +   F      QF+               +    +  A + ++
Sbjct: 60  EAIRIIP---ILVLLFVFYFGFATWFNWQFS---------AMWVCVVVFVLWGTAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++K SSLAV +
Sbjct: 108 VRAAITSIDQHQRDSAYALGLTHVQALVYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLI 167

Query: 345 GFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           G  +++ VG  II  +   +      I      +Y  +   ++     L  
Sbjct: 168 GVVEVIKVGQQIIENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEK 218



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 46/97 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  
Sbjct: 3   LDYLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R IP LV++F  Y    +       ++ +   +F+  
Sbjct: 63  RIIPILVLLFVFYFGFATWFNWQFSAMWVCVVVFVLW 99


>gi|254461456|ref|ZP_05074872.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206678045|gb|EDZ42532.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 269

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 81/217 (37%), Gaps = 17/217 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V + + G   +            K  +     +I  FL  G P  +     Y L      
Sbjct: 49  VVALLFGFFFATALAVAK-AAQNKWLRKPAEWFI--FLFRGSPLFIQFFFAYFLFLSLKG 105

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F     +  +  ++   I L C TAA+  EI    L ++P+G +EAA A GLT    
Sbjct: 106 VSPFF----NAFTAAWLGALIVLFCNTAAYTGEIFYGALRSIPKGDVEAADAYGLTGWPR 161

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAI 364
            + ++ P  +R   P  T++ + L   ++L    GF       D +       ++T    
Sbjct: 162 FKRIIWPTMLRLAWPAYTNEAIFLFHATTLVFFTGFPAWQQRGDALYYANYFADKTFNPF 221

Query: 365 EIILIWMFIYLSLSIMI----ALFMNRLNAKIALKEK 397
               I    ++ L++++         RLN  +  + +
Sbjct: 222 VPYPILAAFFIILTLIVISGFGFVNRRLNRHLPQERR 258


>gi|158424110|ref|YP_001525402.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
 gi|158330999|dbj|BAF88484.1| amino acid ABC transporter permease protein [Azorhizobium
           caulinodans ORS 571]
          Length = 227

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 2/227 (0%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           + N  L   T         ++ +   G+++++             G AL ++        
Sbjct: 1   MTNGALFLETFFNPVIIARYLPAIGKGMLVTIEVAACVIVTGIALGLALAVVRSFRLKAV 60

Query: 231 GLPTLVLI-ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
               +V++  L+        +L  F         P F  L++ LS   AAF  E+  +G+
Sbjct: 61  NAAIIVMVDILRALPPLVLVLLVYFGLPNVGLTLPSFAVLWLVLSLVLAAFAEEVFWAGI 120

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           ++V +GQ EA    GLT  +  R ++LPQA+R  +PPLT++ + + KN++L   +G  ++
Sbjct: 121 VSVRKGQWEAGRCTGLTEFQTLRYIVLPQAIRLTVPPLTNRTIAITKNTALGTVIGVPEI 180

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           ++   T  + +G A   +++    YL L + + +    +  + A + 
Sbjct: 181 LNQATTAQSFSGSATP-LMMGAVAYLILFVPVVIAGRYIETRFAWRR 226


>gi|57237522|ref|YP_178536.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni RM1221]
 gi|86148955|ref|ZP_01067187.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|218562123|ref|YP_002343902.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|57166326|gb|AAW35105.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni RM1221]
 gi|85840313|gb|EAQ57570.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|112359829|emb|CAL34616.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|284925735|gb|ADC28087.1| amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|315057888|gb|ADT72217.1| Amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni S3]
 gi|315928203|gb|EFV07520.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
 gi|315929760|gb|EFV08930.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 218

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)

Query: 223 YISTFLIFGL---PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           YI  F   GL     + L+   + ++F  P    ++            +  I  S +   
Sbjct: 48  YIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDL-------SSVSAAIIVFSIWGCF 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + ++VR  L ++P+ Q E+A +LGL   ++   V++PQAMR + P   +    ++K+++
Sbjct: 101 EMMDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNLLTRMIKSTT 160

Query: 340 LAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A  +G  +LV VG  II            I  +  FI+  L   I L+  +L  K +
Sbjct: 161 FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS 218


>gi|169796307|ref|YP_001714100.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii AYE]
 gi|213156957|ref|YP_002319002.1| ArtM protein [Acinetobacter baumannii AB0057]
 gi|215483766|ref|YP_002325991.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
 gi|294837740|ref|ZP_06782423.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013113]
 gi|294859373|ref|ZP_06797142.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter sp. 6013150]
 gi|301344838|ref|ZP_07225579.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB056]
 gi|301510865|ref|ZP_07236102.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB058]
 gi|301596927|ref|ZP_07241935.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB059]
 gi|169149234|emb|CAM87116.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Acinetobacter baumannii AYE]
 gi|213056117|gb|ACJ41019.1| ArtM protein [Acinetobacter baumannii AB0057]
 gi|213986272|gb|ACJ56571.1| Binding-protein-dependent transport system inner membrane component
           family protein [Acinetobacter baumannii AB307-0294]
          Length = 221

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F      R +     T         FS + G V  +              K+L  LY+
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIM-----TSKNIVVKSLCRLYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I     ++++   +   F      QF+               +    +  A + ++
Sbjct: 60  EAIRIIP---ILVLLFVFYFGFATWFNWQFS---------AMWVCVVVFVLWGTAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++K SSLAV +
Sbjct: 108 VRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLI 167

Query: 345 GFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           G  +++ VG  II  +   +      I      +Y  +   ++     L  
Sbjct: 168 GVVEVIKVGQQIIENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEK 218



 Score = 46.1 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 46/97 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  
Sbjct: 3   LDYLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKSLCRLYLEAI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R IP LV++F  Y    +       ++ +   +F+  
Sbjct: 63  RIIPILVLLFVFYFGFATWFNWQFSAMWVCVVVFVLW 99


>gi|16264002|ref|NP_436794.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|150376016|ref|YP_001312612.1| polar amino acid ABC transporter inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|307300145|ref|ZP_07579930.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
 gi|307316502|ref|ZP_07595945.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|15140126|emb|CAC48654.1| putative amino acid ABC transporter permease protein [Sinorhizobium
           meliloti 1021]
 gi|150030563|gb|ABR62679.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium medicae WSM419]
 gi|306897700|gb|EFN28443.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti AK83]
 gi|306905034|gb|EFN35617.1| polar amino acid ABC transporter, inner membrane subunit
           [Sinorhizobium meliloti BL225C]
          Length = 221

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 84/218 (38%), Gaps = 15/218 (6%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           ++ V S V+G+  ++  T   R    +    +   ++           
Sbjct: 15  LPQMLDGAVVTLQVAVLSMVIGVACAIALTVF-RLSGSRILGGIATTWVEVARNTPA--- 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             +   Y  HF                   + +L + ++   A ++AE  R  L A+P  
Sbjct: 71  --LFQIYMAHFGLGNF--------GIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDT 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGG 354
           Q  A  +LG+T  +A RL++LPQ +R    P T+Q +  +  +SL V VG   DL  +  
Sbjct: 121 QARAGRSLGMTSLQAFRLIVLPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGITQ 180

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            +  ++ +  E   +   IY  ++  + L       ++
Sbjct: 181 ELNARSFRTFEFFALAAVIYYLIAKAVTLAARAFAWRM 218



 Score = 44.9 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 38/100 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +A   M+        +   RLS ++++  I   +VEV RN P L  I+  
Sbjct: 18  MLDGAVVTLQVAVLSMVIGVACAIALTVFRLSGSRILGGIATTWVEVARNTPALFQIYMA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + +          L  G+  NN G           A 
Sbjct: 78  HFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAI 117


>gi|302671820|ref|YP_003831780.1| amino acid ABC transporter permease [Butyrivibrio proteoclasticus
           B316]
 gi|302396293|gb|ADL35198.1| amino acid ABC transporter permease protein [Butyrivibrio
           proteoclasticus B316]
          Length = 219

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 84/205 (40%), Gaps = 18/205 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +FV+G++ +         F     K +   YI  F     P LV +   Y    
Sbjct: 25  WLGILAAFVIGLLGAAVLY-----FRVPVLKKIIAAYIEVF--RNTPLLVQLFFIY---- 73

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F            +   + L     A++ E +RSGL +V R Q E+A++LG+T
Sbjct: 74  -------FALPKIGIRISAEICGILGLGLIGGAYMIETIRSGLESVDRIQSESALSLGMT 126

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +    ++LPQA    IP   +  + LLK +S+   +   DL+     +I    + IE 
Sbjct: 127 KGQVFFHIVLPQAFSISIPGFVANVIFLLKETSVFSTISLMDLMFTAKDLIGMYAKTIEC 186

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAK 391
           + + +  YL + + +++    +  +
Sbjct: 187 LFLLVVYYLIMLLPVSILGTVVERR 211



 Score = 43.4 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 36/79 (45%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y        + T  + + G++ A +IG L  A       ++  I   Y+EVFRN P LV
Sbjct: 8   TYLPLYNEAILLTIRIGWLGILAAFVIGLLGAAVLYFRVPVLKKIIAAYIEVFRNTPLLV 67

Query: 144 VIFFLYKSVLSVLPIPDHS 162
            +FF+Y ++  +       
Sbjct: 68  QLFFIYFALPKIGIRISAE 86


>gi|170289919|ref|YP_001736735.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173999|gb|ACB07052.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 215

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 22/227 (9%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      +     T+   A      F LG+ +++     +R            L    + 
Sbjct: 5   IEYIPFLMEGSLWTLSLVALGLSLGFSLGLPIAIMKFYGAR------------LDAYVWF 52

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           + G P +VL++L Y   F                   F +  IAL   ++A+ ++I  S 
Sbjct: 53  MRGTPLIVLLSLLYWGVFPA----------LGVKIGPFETSVIALGLRSSAYQSQIFLSA 102

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +V   Q+ AA ++G+  R+    VLLPQA+R  +P  +++Y  +LK+SS+  A+G  +
Sbjct: 103 LNSVDSDQIIAARSIGMRERQVVAYVLLPQALRISLPSWSNEYAIMLKDSSICFALGVME 162

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +++    I   TG A+   L+   ++ SL+      +  +  ++ +K
Sbjct: 163 ILTRARYISVATGSALLPYLLAGILFFSLTHAGTSAIELIYRRVRIK 209


>gi|315634947|ref|ZP_07890229.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
 gi|315476499|gb|EFU67249.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Aggregatibacter segnis ATCC 33393]
          Length = 222

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 12/180 (6%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           T K   +  +  F +  +  + L+ L +  +F             +T             
Sbjct: 45  TSKNRLIRAVCRFYLEFVRIIPLLVLLFITYFGVAKWF-------NTHIDGVTVCIWVFI 97

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +  A + ++VR  L ++ + Q E+A ALGLT  +  R +LLPQ+++ + P   + +  +
Sbjct: 98  FWGTAEMGDLVRGALTSIEKHQTESAYALGLTPLQTFRYILLPQSLKRVTPSAINLFTRM 157

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           +K SSLA+ +G  +++ VG  II  +       A+ I  +   +Y  +   ++LF   L 
Sbjct: 158 VKTSSLAMLIGVLEVIKVGQQIIETSLFTEPSAALWIYGVIFLLYFVICYPLSLFSRYLE 217



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 41/85 (48%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +AF  +  A I+G L+G    S N+L+  +CR Y+E  R IP LV++F  
Sbjct: 15  LLGGLWVTAKIAFVSVFFACILGILLGLLMTSKNRLIRAVCRFYLEFVRIIPLLVLLFIT 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  V          + +   +F+  
Sbjct: 75  YFGVAKWFNTHIDGVTVCIWVFIFW 99


>gi|146276916|ref|YP_001167075.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
 gi|145555157|gb|ABP69770.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17025]
          Length = 275

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 9/180 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF---IGGSTVSPEFMSLYIALSCYTAAF 280
              FL  G P  +   L Y+     P  G   F   +    ++  +    I L   TAA+
Sbjct: 78  WFIFLFRGSPLFIQFFLAYEALVLLPRAGIDIFGLTVETGWLTRAWAGALIVLFLNTAAY 137

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI    L+A+P+G +EAA A GL+  K  R +  P  +R   P  T++ + L   ++L
Sbjct: 138 SAEIFHGALMAIPKGDLEAADAYGLSGWKKFRRIQWPTMLRLAWPAYTNEAIFLFHATTL 197

Query: 341 AVAVGFA------DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               GF       D +       ++T        I  F ++ L++++      +N ++  
Sbjct: 198 VFFSGFPAFQQRGDALYYAKYFADKTFNPFVPYPIVAFYFICLTLLVIWLFGLMNRRLNR 257


>gi|116671350|ref|YP_832283.1| polar amino acid ABC transporter inner membrane subunit
           [Arthrobacter sp. FB24]
 gi|116611459|gb|ABK04183.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Arthrobacter sp. FB24]
          Length = 279

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 8/202 (3%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYI-STFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           GI  +L A  ++       G  L L+ I     I     +VL  L+       PV+    
Sbjct: 65  GIGATLSAAAVAAVIAFPLGLLLCLMRISDLAAIRIPTRIVLEFLR-----GMPVVLMMF 119

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+     + +F+++   L  Y AA  AEI+R+G+ ++P+GQ EA + +GLT  ++  ++ 
Sbjct: 120 FVLLVFGTNQFIAVVAGLVLYNAAVFAEIIRAGIQSLPKGQREAGLTIGLTSFQSRMIIE 179

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ--TGQAIEIILIWMFI 373
           LPQA+R ++P L +Q + LLK++SL   V + +L+     + +   T     +  +   I
Sbjct: 180 LPQAVRRMMPSLVAQLVVLLKDTSLGYIVAYGELLRAVQVMADFLGTQFLFPVFFVAAAI 239

Query: 374 YLSLSIMIALFMNRLNAKIALK 395
           Y++++I ++     +  + + K
Sbjct: 240 YIAINICVSRIAVWIERRGSKK 261


>gi|258507475|ref|YP_003170226.1| amino acid ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|257147402|emb|CAR86375.1| ABC transporter, amino acid transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259648829|dbj|BAI40991.1| amino acid ABC transporter permease component [Lactobacillus
           rhamnosus GG]
          Length = 222

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 5/190 (2%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
                +R  H      +  +Y+S      +     I + Y L+F  P L      G    
Sbjct: 34  CLIAWTRIKHFPILNQIVGVYLSFARSVPM-----IVVLYILYFALPNLTSMLNNGKGLH 88

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
            P  +    AL+ +++A+  E  R+   A+   Q+EAA+A GL+   A R ++LPQA   
Sbjct: 89  IPATVVAVAALALFSSAYFGETFRAAYQALDPTQLEAALASGLSKMTAMRRIILPQAAAL 148

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +P + +  ++++K +++   +G  ++      + ++T Q I   L    IYL L  +++
Sbjct: 149 ALPNVFNSVMDIVKGTAIIYNIGLLEITGTSILVGSKTYQFIPAYLAAWTIYLILYWLVS 208

Query: 383 LFMNRLNAKI 392
              + +  +I
Sbjct: 209 AIFHLIKKQI 218


>gi|325062836|gb|ADY66526.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 247

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 96/243 (39%), Gaps = 9/243 (3%)

Query: 152 VLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHF 211
            + +      +       +     L    +T+         S V G + +   T      
Sbjct: 9   FIELAAHIGLNYDFLNSGYEVQIWLDGMKMTLILVGVTLPLSLVFGFIFAAMLTSGKGWL 68

Query: 212 HEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYI 271
                           L    PTLV +   + L  +  +         + ++P F  + I
Sbjct: 69  AGPV-------RAYVELTRNTPTLVQLMCGF-LVLNMLISNALGGAQNNPLTPFFWVVAI 120

Query: 272 ALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQY 331
               + AAF AE +R G+ AVP   +EAA A+G T  +  R V  P A+R+ +P + +  
Sbjct: 121 T-GLHVAAFHAEALRGGIEAVPATTIEAARAIGFTSFEILRYVEFPLAIRTALPSIINNL 179

Query: 332 LNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +NL+K +++  A+   ++      I  Q    +E++L+ +  +  ++ ++A     L  +
Sbjct: 180 INLVKLTTVGSAIAVGEITYASILIWTQRDNVVELMLVILIFFSVINFIVARAGLWLERR 239

Query: 392 IAL 394
           +A+
Sbjct: 240 LAV 242



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + +        L G   T  L    +  + + G +  A   S    +A   R YVE+ 
Sbjct: 20  YDFLNSGYEVQIWLDGMKMTLILVGVTLPLSLVFGFIFAAMLTSGKGWLAGPVRAYVELT 79

Query: 137 RNIPPLVVIFFLYKSV 152
           RN P LV +   +  +
Sbjct: 80  RNTPTLVQLMCGFLVL 95


>gi|85057405|ref|YP_456321.1| ABC transporter extracellular solute-binding protein [Aster yellows
           witches'-broom phytoplasma AYWB]
 gi|84789510|gb|ABC65242.1| ABC transporter, bacterial extracellular solute-binding protein
           [Aster yellows witches'-broom phytoplasma AYWB]
          Length = 569

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 7/132 (5%)

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P LV   + Y        L +F F   +T      + Y+ +   T  +I+EI+   +  +
Sbjct: 414 PMLVQAFVSYFF------LKEFIFFKNATWYTPMFAAYMVIILNTMGYISEIITKNIYFL 467

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVS 351
            +GQ+EA+++LG+TH +  R ++LPQA++    P+ ++++  LK+  +   + G  D+  
Sbjct: 468 DKGQIEASLSLGMTHTQTMRYIVLPQAIKRSQTPILNEFIINLKDCVVFSMLGGIIDIAC 527

Query: 352 VGGTIINQTGQA 363
               + +     
Sbjct: 528 ASNALYSSVASP 539


>gi|260433179|ref|ZP_05787150.1| ABC transporter, permease protein, HisMQ family [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417007|gb|EEX10266.1| ABC transporter, permease protein, HisMQ family [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 598

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 10/138 (7%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F    I  S    AF A ++  G+ AVP  Q+E A A G+T R+    +L+PQ     +P
Sbjct: 444 FFLAVITFSIVFGAFAANVLFGGMRAVPLAQLETAEAYGMTRRQTFWRILVPQMWVYALP 503

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEII----------LIWMFIYL 375
            L++ ++ L+K + L   +G  D+V     +                     L  +  YL
Sbjct: 504 GLSNLWMVLIKATPLLFLLGVEDIVYWARELGGTKTSKFTAYPHGDWRMWYFLFLLVFYL 563

Query: 376 SLSIMIALFMNRLNAKIA 393
            ++ +  + + RL  +++
Sbjct: 564 GMTRVSEIGLERLMRRLS 581


>gi|10954673|ref|NP_066608.1| hypothetical protein pRi1724_p028 [Agrobacterium rhizogenes]
 gi|10567337|dbj|BAB16146.1| riorf27 [Agrobacterium rhizogenes]
          Length = 231

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 4/234 (1%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   + L  + L F    +     +   S ++G+V+       +      TG    L
Sbjct: 1   MTWLEPDLQLAIQWLPFLMAGVLMTLVLASGSLLIGLVIGGLG---ATFKARPTGVMRSL 57

Query: 222 LYISTFLIFGLPTLVLIA-LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
             + T ++ G+P L+++    + L+     L Q   +      P  +  +++L     A 
Sbjct: 58  TQLYTTIVRGVPQLIIVYYFYFGLNAGIRTLPQIPGLPSPLELPVILVAFLSLGFIVGAL 117

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             E+ R+   AVP+ ++ A  A G+      R +L P  +R  +P L + ++ LLK++SL
Sbjct: 118 AVELFRTAYAAVPQSEVLAGEAFGMPPFMLFRRILFPHIVRYSLPGLGNIWIGLLKDASL 177

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              +G  +L+         TG+     L+   +YL ++I        L  +  +
Sbjct: 178 ISVMGVTELMRSTTVAAESTGEPFLFYLLCTALYLIITIASGGIFAVLERRYTV 231


>gi|157414761|ref|YP_001482017.1| amino acid ABC transporter permease [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|283955890|ref|ZP_06373380.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 1336]
 gi|157385725|gb|ABV52040.1| polar amino acid transport system permease protein [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792550|gb|EFC31329.1| LOW QUALITY PROTEIN: polar amino acid transport system permease
           protein [Campylobacter jejuni subsp. jejuni 1336]
 gi|307747400|gb|ADN90670.1| Amino-acid ABC transporter integral membrane protein [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315931091|gb|EFV10065.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 218

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)

Query: 223 YISTFLIFGL---PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           YI  F   GL     + L+   + ++F  P    ++            +  I  S +   
Sbjct: 48  YIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDL-------SSVSAAIIVFSIWGCF 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + ++VR  L ++P+ Q E+A +LGL   ++   +++PQAMR + P   +    ++K+++
Sbjct: 101 EMMDLVRVSLQSIPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNLLTRMIKSTT 160

Query: 340 LAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A  +G  +LV VG  II            I  +  FI+  L   I L+  +L  K +
Sbjct: 161 FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS 218


>gi|260434995|ref|ZP_05788965.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109]
 gi|260412869|gb|EEX06165.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109]
          Length = 324

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 91/217 (41%), Gaps = 18/217 (8%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
               TLT+         +  LGI+L+L      R       +     YI       L  +
Sbjct: 113 WGGLTLTLLLTGGSGALALPLGILLAL-----GRRSELPVLRWSSAAYIELMRAVPLIAV 167

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +         F  P L     +        F +           +IAE VR GL A+P  
Sbjct: 168 LFFGQLLIPLFLPPGLEINRVLRAVVAFALFAAA----------YIAEDVRGGLQAIPPT 217

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA  LGL+ R+  +LV+LPQA+R  +P LT+Q + LL+N+SL   +G  +L+ +  +
Sbjct: 218 QREAAAVLGLSPRQVLQLVVLPQALRVALPSLTNQAVGLLQNTSLMAILGLVELLGISRS 277

Query: 356 IINQ---TGQAIEIILIWMFIYLSLSIMIALFMNRLN 389
           ++      G+ +E+ L    +Y      +AL    L 
Sbjct: 278 LLANPAFIGRYLEVYLWLAAVYWLACTAMALLARHLE 314



 Score = 38.4 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 61/183 (33%), Gaps = 7/183 (3%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A  +G L+  GR S   ++ W    Y+E+ R +P + V+FF    +   LP       +
Sbjct: 129 LALPLGILLALGRRSELPVLRWSSAAYIELMRAVPLIAVLFFGQLLIPLFLPPGLEINRV 188

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFV------FSFVLGIVLSLFATRLSRHFHEKTGKAL 219
              +       +             +       + VLG+       +L            
Sbjct: 189 LRAVVAFALFAAAYIAEDVRGGLQAIPPTQREAAAVLGL-SPRQVLQLVVLPQALRVALP 247

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
            L   +  L+     + ++ L   L   + +L    FIG       +++    L+C   A
Sbjct: 248 SLTNQAVGLLQNTSLMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMA 307

Query: 280 FIA 282
            +A
Sbjct: 308 LLA 310


>gi|303233192|ref|ZP_07319865.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
 gi|302480777|gb|EFL43864.1| ABC transporter, permease protein [Atopobium vaginae PB189-T1-4]
          Length = 324

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 14/224 (6%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           +  FL      F          I V +  L + L L    L R  H      +  + I  
Sbjct: 57  WNFFLLPSTWRFLGQGFLGTLSIAVCAGALSLALGLVLM-LCRISHNVVLTWVARILIDF 115

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
           F   G+P+L+LI   +                       F  + + ++C  AA +AE+ R
Sbjct: 116 F--RGVPSLLLIYFCF-----------LVIPRYGIKLASFWMITLPVACAAAAVLAEVFR 162

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G+ AV +GQ EAA ALG +  +  +LV+LPQA+R +IP L SQ + ++K++++A  V +
Sbjct: 163 AGVHAVGKGQKEAARALGFSRWQVLKLVVLPQAIRYVIPALISQLVVVVKDTTVAYVVSY 222

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            DL+     +I      + +  +   IY+ ++  +     R   
Sbjct: 223 PDLMQNARVLITNYDALVSVYFVIAAIYILVNWGLNSVSVRYAR 266



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 42/102 (41%)

Query: 86  ATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVI 145
              +  GF+ T  +A      +  +G ++   R+S N ++ W+ R+ ++ FR +P L++I
Sbjct: 66  WRFLGQGFLGTLSIAVCAGALSLALGLVLMLCRISHNVVLTWVARILIDFFRGVPSLLLI 125

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +F +  +           ++   +      +         +A
Sbjct: 126 YFCFLVIPRYGIKLASFWMITLPVACAAAAVLAEVFRAGVHA 167


>gi|83949517|ref|ZP_00958250.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
 gi|83837416|gb|EAP76712.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseovarius nubinhibens ISM]
          Length = 268

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 79/222 (35%), Gaps = 17/222 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +       V  F L  +L++     SR   +             F+  G P  V  
Sbjct: 40  MLWNIYFGTLALVAGFFLANLLAVAKAAPSRWARKPA-------EWFIFVFRGSPLFVQF 92

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y L          +F   +  +  ++   + L   TAA+ AEI    L ++P+G +E
Sbjct: 93  FFAYFLFLSLKQ----SFPIFTPFASAWLGALVVLFFNTAAYSAEIFYGALRSIPKGDVE 148

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSV 352
           AA A G +     R ++ P  +R   P  T++ + L   + L    GF       D +  
Sbjct: 149 AADAYGFSGWPRFRRIIWPTMLRLGWPAYTNEAIFLFHATVLVFFSGFPSRQQRGDALYY 208

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                ++T        I    ++ L++++      +N ++  
Sbjct: 209 ANYFADKTFNPFVAYPILAGYFILLTLVVIAIFGLINRRLNR 250


>gi|311742427|ref|ZP_07716236.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aeromicrobium marinum DSM 15272]
 gi|311314055|gb|EFQ83963.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Aeromicrobium marinum DSM 15272]
          Length = 215

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 19/224 (8%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLP 233
           +     T T+         + V+G+++ +     +R       + L  +Y+  F     P
Sbjct: 10  QFWLGFTETVKLLLASSALALVVGVLIGV-----ARVSPVSVLRRLGSVYVVLF--RNTP 62

Query: 234 TLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVP 293
            LVLI L Y       V   F F G  T         +A+  YTAAF+ E +RSG+  VP
Sbjct: 63  LLVLILLTYYG--LPRVGIDFGFFGNIT---------LAMGVYTAAFVCEAIRSGINGVP 111

Query: 294 RGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVG 353
            GQ EAA A+G+        V+LPQA+R ++PP+ S ++ L KN+SLA   G A+     
Sbjct: 112 IGQAEAARAIGMPFATTMSQVVLPQAVRLVVPPMASVFIALTKNTSLAATFGIAEATFRM 171

Query: 354 GTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             ++     + + I + +   Y+ +  +I+     L  + A+  
Sbjct: 172 NGMLRDNASERVMIFVGFAAGYIVIVAIISAAAAALERRWAVTR 215



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
             +GF  T  L  +    A ++G L+G  R+S   ++  +  VYV +FRN P LV+I   
Sbjct: 11  FWLGFTETVKLLLASSALALVVGVLIGVARVSPVSVLRRLGSVYVVLFRNTPLLVLILLT 70

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           Y  +  V         +   M + 
Sbjct: 71  YYGLPRVGIDFGFFGNITLAMGVY 94


>gi|227818923|ref|YP_002822894.1| arginine ABC transporter permease [Sinorhizobium fredii NGR234]
 gi|227337922|gb|ACP22141.1| predicted ABC-type arginine transport system, permease component
           [Sinorhizobium fredii NGR234]
          Length = 237

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 81/224 (36%), Gaps = 1/224 (0%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           + + +                 + +   + GI++++    L R             Y   
Sbjct: 6   WVLLVERGWGFALLRGATVTLAVGLLGMLAGIIVAVPL-ALLRWRRLPIFSQAVDGYSIL 64

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                   ++ +     + + + +   F +   +  +  F+   +A++  + A+  E+ R
Sbjct: 65  VRGVPGLLVIYLLFFGSIEWVQRLATAFGYQNSADDAYPFVIGVVAIAAISCAYSIEVFR 124

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L AVP G +EAA +L L +      V LP A+R  +  L + +   +K++SL   VG 
Sbjct: 125 GALEAVPVGLLEAAKSLALPNHVTFFRVTLPIALRLALGGLNNVWQMTIKDTSLVSVVGM 184

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            +L+         T   +        ++ +L+ +     +    
Sbjct: 185 QELMRSAAIAAGITRSPLLFYCAAAGMFFALTAISQTLFSHTER 228


>gi|94676954|ref|YP_588773.1| arginine ABC transporter, permease protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94220104|gb|ABF14263.1| arginine ABC transporter, permease protein [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 231

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 13/232 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGK-----------ALP 220
               L   T    T  K+ + + ++G++L++    +      K  +            LP
Sbjct: 1   MKEFLFLLTNAAVTTLKLAICALIIGLILAISLALIEELKFLKWLRLLCKILLFILYGLP 60

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            + +  F+  G+  L+LIA  Y       +   F  +  +     F    I+L+   AA+
Sbjct: 61  EILVVLFIYLGISQLLLIATYYINKCMMDMHLGFFVVNLNI--SPFSCGVISLALLYAAY 118

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
             + ++  +  + +GQ E+  +LG+ +      ++LPQ  R  +P L +Q+L LLK+++L
Sbjct: 119 AYQTIQGAIKVISKGQWESGQSLGMDNFVIFFRLILPQIWRYALPGLGNQWLVLLKDTTL 178

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              +   DL+     II  T +     ++   IYL +++     +  L  KI
Sbjct: 179 VSLISVNDLMLQTKNIIIITNKPYTWYIVSAMIYLIIALFSQGIIYILQRKI 230


>gi|254463839|ref|ZP_05077250.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium Y4I]
 gi|206684747|gb|EDZ45229.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodobacterales bacterium Y4I]
          Length = 268

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 82/228 (35%), Gaps = 21/228 (9%)

Query: 181 LTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIAL 240
             +   A      F L + L++      +       +     +I  F+  G P  +    
Sbjct: 42  WNVYFGALALTTGFFLAVALAV-----GKSSPNPLWRKPAEWFI--FVFRGSPLFIQFFF 94

Query: 241 KYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
            Y        +  F        +  ++   + L   TAA+  EI    L+++P+G +EAA
Sbjct: 95  AYACFLSLKSVSSFF----DPFTSAWLGALVVLFFNTAAYSGEIFYGALLSIPKGDIEAA 150

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGG 354
            A G++     R +  P  +R   P  T++ + L   ++L    GF       D +    
Sbjct: 151 DAYGMSGWTRFRRITFPTMLRLAWPAYTNEAIFLFHATTLVFFSGFPAWRQQGDALYYAS 210

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFM----NRLNAKIALKEKK 398
              ++T        I  F ++ L+++I          LN  +  + ++
Sbjct: 211 YFADKTFNPFVPYPILAFYFILLTLVIIAIFGAVNKHLNKHLPQERRR 258


>gi|161170238|gb|ABX59209.1| transport system permease protein BztC [uncultured marine group II
           euryarchaeote EF100_57A08]
          Length = 699

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 91/229 (39%), Gaps = 17/229 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL-YISTFLIFG 231
                   + +   A   V  F +G+VL+                 LPL  Y S  +I  
Sbjct: 475 PSQWGGLFVNLFVAAAGCVLGFGIGVVLAFGRQS-----------NLPLFKYPSIGIIEL 523

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + +  LI   Y   +  P + +  F          + + +    +   +IAE++R GL +
Sbjct: 524 VRSGPLICWLYFAMYLLPDVVEPTFKDPEDFD-NIVRMMLIFGIFGGCYIAEVIRGGLQS 582

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAAIALGL   +    + LP A+R+ +P + S ++ L K+++L   +   D   
Sbjct: 583 VDSGQREAAIALGLNPIQTKLQIELPNAIRTTLPSIVSVFIGLWKDTTLLFIINILDFFK 642

Query: 352 VGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +     N      G  IE +     ++  ++  ++    R+   + L  
Sbjct: 643 LAKDSPNTDMRFLGDFIEPVYFSAIVFWVVAFYLSRVSMRMERNLGLVR 691



 Score = 37.2 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G     ++A +G +    IG ++  GR S   L  +     +E+ R+ P +  ++F    
Sbjct: 480 GLFVNLFVAAAGCVLGFGIGVVLAFGRQSNLPLFKYPSIGIIELVRSGPLICWLYFAMYL 539

Query: 152 VLSV 155
           +  V
Sbjct: 540 LPDV 543


>gi|118590989|ref|ZP_01548389.1| putative transport system permease abc transporter protein [Stappia
           aggregata IAM 12614]
 gi|118436511|gb|EAV43152.1| putative transport system permease abc transporter protein [Stappia
           aggregata IAM 12614]
          Length = 271

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 5/262 (1%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YV             FL     +++      +   +      + +     T+       
Sbjct: 10  AYVPPPPRRLLEPHRIFLIALFGAIVFCAVWFLRWDWLEKYQWKLIHGIWETLFLLFSTA 69

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
              FVL ++L L      +    +    L   + +      L   + +            
Sbjct: 70  AAGFVLAVLLGLV-----QVTGPRPLAMLARGFCTLIRGTPLLLQLWLLYYGLGSVFAQY 124

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +    +   +   + AL    AA+  E++R     VPRG++EAA A G+     
Sbjct: 125 PEIRQSMFWPYLRQAWPYGFTALMLSFAAYEGEVMRGAFAGVPRGELEAARAFGMGRFTM 184

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R + LP+A    +P L+ + +  LK++ L   +   D+ ++   +   T    E +L+ 
Sbjct: 185 FRRIWLPRAFYRALPTLSGETVLQLKSTPLVATITVVDVYAIISRVRQDTYLTYEPLLLL 244

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             IY+ L+ ++ L    L  +I
Sbjct: 245 ALIYMCLTGILVLLFRFLENRI 266


>gi|28869817|ref|NP_792436.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28853062|gb|AAO56131.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tomato str. DC3000]
          Length = 244

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 97/247 (39%), Gaps = 11/247 (4%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
             +S +        +       +     L     T+       + S + G+ L+   T  
Sbjct: 4   WLESAVQWAAGIGLNYAFLLDAYQRGTMLEGAVTTLWLCLLTIIGSLLAGVALAAMLTSG 63

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                           I   +    PTLV +       F    +     +G +     F 
Sbjct: 64  KAWLAMPA-------RIFIEVTRNTPTLVQL----YCAFLVLNMLLTQAVGAANPLTPFA 112

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            + I +S +  AF AE +R+G+ AVP   +EAA +L  + R+    V LP A+R  +P L
Sbjct: 113 WVVIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFSSRQLLWNVQLPLAVRFALPSL 172

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  ++L+K +++A A+   D+      I  Q+   +E++++ +  +  LS  +      
Sbjct: 173 VNNLIDLVKMTAVASAIAVNDITYASIMIWTQSDNVLELMILLLSFFAVLSFAVNCAGRA 232

Query: 388 LNAKIAL 394
           L A++ +
Sbjct: 233 LEARLRM 239



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T WL    +I + + G  + A   S    +A   R+++EV RN P LV ++  
Sbjct: 31  MLEGAVTTLWLCLLTIIGSLLAGVALAAMLTSGKAWLAMPARIFIEVTRNTPTLVQLYCA 90

Query: 149 YKSV 152
           +  +
Sbjct: 91  FLVL 94


>gi|163804164|ref|ZP_02197929.1| putative amino acid ABC transporter, permease protein [Vibrio sp.
           AND4]
 gi|159172018|gb|EDP56997.1| putative amino acid ABC transporter, permease protein [Vibrio sp.
           AND4]
          Length = 181

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 29/183 (15%)

Query: 156 LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFAT------RLSR 209
                 +     G+      L+    T+  +    +F+  +G++++L A       +   
Sbjct: 22  WGWYVLNPTTEQGLTNIKFLLAGFNDTIQVSLLSMLFAMTIGLIIALPALSDSPALKWIN 81

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
             + +  +++P+L +  ++ +G+PTL+ ++L +                       F + 
Sbjct: 82  RIYVEVIRSIPVLVLLLWVYYGMPTLLDVSLNH-----------------------FWAG 118

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            IAL+   +AF+AE+ R G+ A+ RGQ EAA +LGL + +  RLV+LPQA+R I+PPL +
Sbjct: 119 VIALTIAESAFMAEVFRGGIQAISRGQHEAAESLGLNYWQKMRLVILPQALRQILPPLGN 178

Query: 330 QYL 332
           Q++
Sbjct: 179 QFV 181



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 40/70 (57%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +    +L GF +T  ++   M+ A  IG ++    LS +  + WI R+YVEV R+IP LV
Sbjct: 36  TNIKFLLAGFNDTIQVSLLSMLFAMTIGLIIALPALSDSPALKWINRIYVEVIRSIPVLV 95

Query: 144 VIFFLYKSVL 153
           ++ ++Y  + 
Sbjct: 96  LLLWVYYGMP 105


>gi|86151862|ref|ZP_01070076.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|121612627|ref|YP_001000175.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|167005133|ref|ZP_02270891.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315124014|ref|YP_004066018.1| hypothetical protein ICDCCJ07001_428 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841491|gb|EAQ58739.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 260.94]
 gi|87250458|gb|EAQ73416.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 81-176]
 gi|315017736|gb|ADT65829.1| hypothetical protein ICDCCJ07001_428 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 218

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)

Query: 223 YISTFLIFGL---PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           YI  F   GL     + L+   + ++F  P    ++            +  I  S +   
Sbjct: 48  YIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDL-------SSVSAAIIVFSIWGCF 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + ++VR  L ++P+ Q E+A +LGL   ++   +++PQAMR + P   +    ++K+++
Sbjct: 101 EMMDLVRVSLQSIPKHQYESASSLGLNTVQSFVYIIIPQAMRRLTPMSMNLLTRMIKSTT 160

Query: 340 LAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A  +G  +LV VG  II            I  +  FI+  L   I L+  +L  K +
Sbjct: 161 FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS 218


>gi|206580155|ref|YP_002238927.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288935857|ref|YP_003439916.1| polar amino acid ABC transporter inner membrane subunit [Klebsiella
           variicola At-22]
 gi|206569213|gb|ACI10989.1| amino acid ABC transporter, permease protein [Klebsiella pneumoniae
           342]
 gi|288890566|gb|ADC58884.1| polar amino acid ABC transporter, inner membrane subunit
           [Klebsiella variicola At-22]
          Length = 224

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 90/237 (37%), Gaps = 17/237 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +          +   L     T          S + G +L+             T   
Sbjct: 1   MSYHWDFSILWQYHAVLLEGILTTFKIVLASVTLSILGGALLAPLRGASRAVIRLPT--- 57

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                    LI  + ++  + L    ++  P+L              +++  +A+S Y +
Sbjct: 58  -------QGLIEIVRSIPPLVLIVWAYYCLPILFGLTL-------SSYLTCVLAISLYGS 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            F AEI RSG+ +V  G +EA +++G++  K    +  P A   I+P   SQ +  +KNS
Sbjct: 104 VFFAEIFRSGMQSVDHGLVEAGLSVGMSPLKVLVRITAPVAFLRILPAFVSQCVMSVKNS 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            LA  +   +++  G  +   T + +E +      +++  + ++L  +    +I  +
Sbjct: 164 VLASYIATGEILYQGQRLSTATFRPLETLTFVALFFVATILPLSLLASYAERRIRSR 220



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 38/76 (50%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    Y   +L G + TF +  + +  + + G L+   R ++  ++    +  +E+ R
Sbjct: 6   DFSILWQYHAVLLEGILTTFKIVLASVTLSILGGALLAPLRGASRAVIRLPTQGLIEIVR 65

Query: 138 NIPPLVVIFFLYKSVL 153
           +IPPLV+I + Y  + 
Sbjct: 66  SIPPLVLIVWAYYCLP 81


>gi|170516839|gb|ACB15241.1| glutamine transport ATP-binding protein GlnQ [uncultured marine
           group II euryarchaeote DeepAnt-15E7]
          Length = 545

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 87/231 (37%), Gaps = 19/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  +         + +       V  F +GIVL+         F   +   + L+     
Sbjct: 321 GDGIQASQWGGLFVNLIVATAGCVLGFGIGIVLAFGRQSDQPFFSIPSIALIELVRSGPL 380

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +         L + +     ++  F                +    +   +IAE++R 
Sbjct: 381 ICW---------LWFAVFLMPDLMDPFYNAEDIIRM------LLMFGVFGGCYIAEVLRG 425

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL AV  GQ EAAIALGL+  +    V LP A+R+ +P + S ++ L K+++L   +   
Sbjct: 426 GLQAVDSGQKEAAIALGLSPFQTKMQVELPNAVRTTLPSIVSVFIGLWKDTTLLFIINIL 485

Query: 348 DLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           D   +   +        G  +E + +   ++   +  ++    ++   + L
Sbjct: 486 DFFKLAKDLPATDLRFLGNFLEPLYVTALVFWVFAFYLSRVSMKIEKGLGL 536



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 58/173 (33%), Gaps = 4/173 (2%)

Query: 71  EIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICR 130
           ++    +   +      +   G      +A +G +    IG ++  GR S     +    
Sbjct: 310 DVVPSTLDKLAGDGIQASQWGGLFVNLIVATAGCVLGFGIGIVLAFGRQSDQPFFSIPSI 369

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVL-PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
             +E+ R+ P +  ++F    +  ++ P  +   ++   +     G  +    +    + 
Sbjct: 370 ALIELVRSGPLICWLWFAVFLMPDLMDPFYNAEDIIRMLLMFGVFGGCYIAEVLRGGLQA 429

Query: 190 FVFS---FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
                    + + LS F T++           LP +      ++   TL+ I 
Sbjct: 430 VDSGQKEAAIALGLSPFQTKMQVELPNAVRTTLPSIVSVFIGLWKDTTLLFII 482


>gi|184157759|ref|YP_001846098.1| amino acid ABC transporter permease [Acinetobacter baumannii ACICU]
 gi|294842165|ref|ZP_06786848.1| ABC-type amino acid transport system, permease component
           [Acinetobacter sp. 6014059]
 gi|183209353|gb|ACC56751.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii ACICU]
 gi|322508069|gb|ADX03523.1| ArtM protein [Acinetobacter baumannii 1656-2]
 gi|323517651|gb|ADX92032.1| ABC-type amino acid transport system, permease component
           [Acinetobacter baumannii TCDC-AB0715]
          Length = 221

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F      R +     T         FS + G V  +              KAL  LY+
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIM-----TSKNIVVKALCRLYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I     ++++   +   F      QF+               +    +  A + ++
Sbjct: 60  EAIRIIP---ILVLLFVFYFGFATWFNWQFS---------AMWVCIVVFVLWGTAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++K SSLAV +
Sbjct: 108 VRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLI 167

Query: 345 GFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           G  +++ VG  II  +   +      I      +Y  +   ++     L  
Sbjct: 168 GVVEVIKVGQQIIENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEK 218



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 46/97 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  
Sbjct: 3   LDYLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R IP LV++F  Y    +       ++ +   +F+  
Sbjct: 63  RIIPILVLLFVFYFGFATWFNWQFSAMWVCIVVFVLW 99


>gi|270284152|ref|ZP_05965626.2| amino acid ABC transporter, permease protein [Bifidobacterium
           gallicum DSM 20093]
 gi|270277194|gb|EFA23048.1| amino acid ABC transporter, permease protein [Bifidobacterium
           gallicum DSM 20093]
          Length = 163

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 56/113 (49%)

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G  AVP  Q E A  LGL+  +A   V LPQA     P + +  + L+K SS+  A+
Sbjct: 51  LRAGFEAVPAIQHENAYVLGLSQFQAFTHVTLPQAAGMATPGVVANVIFLIKQSSVVSAI 110

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             AD++ +   +++ T    E + + +  YL + + ++L    L  K     +
Sbjct: 111 ALADVMYMAKDLMDVTYNTYESLFMLIVAYLVILLPVSLMGTWLERKFDYARR 163


>gi|260555374|ref|ZP_05827595.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii ATCC 19606]
 gi|260411916|gb|EEX05213.1| amino acid ABC transporter membrane protein [Acinetobacter
           baumannii ATCC 19606]
          Length = 221

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 88/231 (38%), Gaps = 22/231 (9%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F      R +     T         FS + G V  +              K+L  LY+
Sbjct: 5   YLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIM-----TSKNIVVKSLCRLYL 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
               I     ++++   +   F      QF+               +    +  A + ++
Sbjct: 60  EAIRIIP---ILVLLFVFYFGFATWFNWQFS---------AMWVCVVVFVLWGTAEMGDL 107

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++K SSLAV +
Sbjct: 108 VRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLI 167

Query: 345 GFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           G  +++ VG  II  +   +      I      +Y  +   ++     L  
Sbjct: 168 GVVEVIKVGQQIIENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEK 218



 Score = 46.1 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 46/97 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y   +S+   ++ G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  
Sbjct: 3   LDYLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKSLCRLYLEAI 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R IP LV++F  Y    +       ++ +   +F+  
Sbjct: 63  RIIPILVLLFVFYFGFATWFNWQFSAMWVCVVVFVLW 99


>gi|88596842|ref|ZP_01100078.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88190531|gb|EAQ94504.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 218

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 14/178 (7%)

Query: 223 YISTFLIFGL---PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           YI  F   GL     + L+   + ++F  P    ++            +  I  S +   
Sbjct: 48  YIYAFCRLGLEFVRVMPLLVWLFVVYFGFPRWFGWDL-------SSVSAAIIVFSIWGCF 100

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            I ++VR  L ++P+ Q E+A +LGL   ++   V++PQAMR + P   +    ++K+++
Sbjct: 101 EIMDLVRVSLQSIPKHQYESASSLGLNTVQSFAYVIIPQAMRRLTPMSMNLLTRMIKSTT 160

Query: 340 LAVAVGFADLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A  +G  +LV VG  II            I  +  FI+  L   I L+  +L  K +
Sbjct: 161 FAYLIGAVELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS 218


>gi|319943775|ref|ZP_08018056.1| glutamine/glutamate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
 gi|319743008|gb|EFV95414.1| glutamine/glutamate ABC superfamily ATP binding cassette
           transporter, membrane protein [Lautropia mirabilis ATCC
           51599]
          Length = 226

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 21/218 (9%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                I V S     +L      L R       +A   LY+ T  I       ++   + 
Sbjct: 21  WLTLYISVISVAASALLGTGLGLLMR-SGSAAVRAGCRLYLETIRIVP-----ILVWLFV 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           L+F  P    +                   S +  A + ++VR  L ++P  Q  +A+AL
Sbjct: 75  LYFGLPTWTGW-------HVDALWVCVGVFSLWGTAEMGDLVRGALSSLPPHQRTSALAL 127

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ- 362
           GLT  +  R V  PQA+R ++P   + +  ++K +SLA  +   ++V VG  II ++   
Sbjct: 128 GLTRAQVFRYVEAPQALRRVLPGAINLFTRMVKTTSLAALISVMEVVKVGQQIIERSQMI 187

Query: 363 -------AIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
                  +  I  +   +Y  +   ++ +  RL  + A
Sbjct: 188 EPKVPTASFWIYGLIFLLYFLVCWPLSWWAARLERRWA 225


>gi|302554580|ref|ZP_07306922.1| glutamate permease [Streptomyces viridochromogenes DSM 40736]
 gi|302472198|gb|EFL35291.1| glutamate permease [Streptomyces viridochromogenes DSM 40736]
          Length = 221

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 10/231 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F    +   L     T+       V S V G +L+       R       +     Y++
Sbjct: 1   MFDFLEDYDLLGAFWTTVQLAVLSAVGSLVWGTLLAAM-----RVGPVPLMRGFGTAYVN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L  ++L                 +       +  F    + L  YT++F+ E +
Sbjct: 56  IVRNIPLTVIILFT-----SLGLNQTLGISLGADDVETINFRLAVLGLIFYTSSFVCEAL 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP GQ EAA A+GLT R+   LV+LPQA RS + PL +  + L+KN+++A A+G
Sbjct: 111 RSGINTVPVGQAEAARAIGLTFRQVLGLVVLPQAFRSSVVPLANVLIALIKNTTVAAAIG 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+   +   +I    Q + I  I  F ++ L++   L +  +  K+A+K 
Sbjct: 171 VAEAAVLMKEMIENEAQLLLISAIIAFGFVVLTLPTGLILGWVGKKVAVKR 221



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 30/67 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  LA    + + + GTL+ A R+    L+      YV + RNIP  V+I F 
Sbjct: 10  LLGAFWTTVQLAVLSAVGSLVWGTLLAAMRVGPVPLMRGFGTAYVNIVRNIPLTVIILFT 69

Query: 149 YKSVLSV 155
              +   
Sbjct: 70  SLGLNQT 76


>gi|332096852|gb|EGJ01842.1| amino ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family domain protein [Shigella
           dysenteriae 155-74]
          Length = 216

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 5/206 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGIWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADLVSVGGTIINQTGQA 363
           S++A  +G  D+ +  G +++ +  A
Sbjct: 183 SAIASTIGLVDMAAQAGKLLDYSAHA 208



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 57  LSLGIGFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGA 116
           +    G   ++A F           +++Y   I  GF  T  L+    I A ++G+  G 
Sbjct: 3   IDWNWGIFLQQAPFG----------NTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGI 52

Query: 117 GRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSI 163
            R   N+ ++ +  +YVE+FRN+P +V  F  Y  +  +LP      
Sbjct: 53  LRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGIW 99


>gi|260435752|ref|ZP_05789722.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109]
 gi|260413626|gb|EEX06922.1| amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. WH 8109]
          Length = 296

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 128/259 (49%), Gaps = 13/259 (5%)

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLS 201
           L+             P              ++  L   T+    + K+     VL     
Sbjct: 31  LIRTGLGLGFGWLGRPAGFALAETALPYAPSDSYLWALTIGWLNSLKVIAAGLVL-ATGL 89

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF-DKPVLGQFNFIG-- 258
             A   +R  + +  ++L   Y+   LI  +P L+ +   Y + F   P +     I   
Sbjct: 90  GVAAGAARGGNNRLLRSLAGGYV--ALIRQVPLLLQLLFWYFVAFLGLPSMPIGGLIRLS 147

Query: 259 -------GSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
                  G  +S EF ++ + L+ +T A IAEIVR G+ AVPRGQ EA  +LGL      
Sbjct: 148 NQGIQLLGLNLSVEFCAVLVGLTVFTGASIAEIVRGGINAVPRGQWEAFRSLGLGEGLGL 207

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWM 371
           R ++LPQA+ +I+P LTSQYLNL KNS+LA+AVG+ADL +V  T I QTG+AIE  L+ +
Sbjct: 208 RRIVLPQALPAILPALTSQYLNLAKNSTLAIAVGYADLYAVSDTTITQTGRAIEGFLLLL 267

Query: 372 FIYLSLSIMIALFMNRLNA 390
             +L L+++I+  M  LN 
Sbjct: 268 LSFLLLNLLISGGMAALNR 286



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 71/138 (51%)

Query: 23  RVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQGIVPYTSD 82
           R   + VQ+ +A +L       VNN+  N+ ++ L LG G+L   AGF + +  +PY   
Sbjct: 2   RQRRLLVQVGVAAVLLGFLALLVNNLAVNLIRTGLGLGFGWLGRPAGFALAETALPYAPS 61

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SY  A+ +G++N+  +  +G++ AT +G   GA R   N+L+  +   YV + R +P L
Sbjct: 62  DSYLWALTIGWLNSLKVIAAGLVLATGLGVAAGAARGGNNRLLRSLAGGYVALIRQVPLL 121

Query: 143 VVIFFLYKSVLSVLPIPD 160
           + + F Y      LP   
Sbjct: 122 LQLLFWYFVAFLGLPSMP 139


>gi|238787905|ref|ZP_04631701.1| Amino acid ABC transporter, permease protein [Yersinia
           frederiksenii ATCC 33641]
 gi|238723853|gb|EEQ15497.1| Amino acid ABC transporter, permease protein [Yersinia
           frederiksenii ATCC 33641]
          Length = 227

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 13/217 (5%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           LS    T++  A   +    LGIV +      +        +     Y+   ++   P +
Sbjct: 18  LSGLLTTIELTAMATIGGMALGIVGAAIRCSDNNASGSVILRRAWGGYVE--IVRNTPFV 75

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           V +   + + F  P LG     G         +  +A+     A+  EI+R+G+ A  +G
Sbjct: 76  VQL---FFIVFGLPALGLKLSAGQ--------AALLAMIINLGAYSTEIIRAGIQASAKG 124

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EA   LGL+  +    V+LP +++ I P L SQ + ++  S++   V F +L      
Sbjct: 125 QWEAGRVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVAFEELTFAANL 184

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           I ++T  + E+ L+   +YL LSI +   +     + 
Sbjct: 185 IQSRTFLSFEVYLVTTLLYLLLSIAMRQLLLAAGRRF 221



 Score = 39.9 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 5/118 (4%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGR-----LSANKLVAWICRV 131
           + +++   Y   +L G + T  L     I    +G +  A R      S + ++      
Sbjct: 5   LNFSALWPYLPELLSGLLTTIELTAMATIGGMALGIVGAAIRCSDNNASGSVILRRAWGG 64

Query: 132 YVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           YVE+ RN P +V +FF+   + ++             M +N    S   +     A  
Sbjct: 65  YVEIVRNTPFVVQLFFIVFGLPALGLKLSAGQAALLAMIINLGAYSTEIIRAGIQASA 122


>gi|260103305|ref|ZP_05753542.1| amino acid ABC superfamily ATP binding cassette transporter
           [Lactobacillus helveticus DSM 20075]
 gi|260082886|gb|EEW67006.1| amino acid ABC superfamily ATP binding cassette transporter
           [Lactobacillus helveticus DSM 20075]
          Length = 224

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +  +        + + T+  I   S  +G+++      L R    K  + +  +Y+  F 
Sbjct: 8   VLFSGSNFDRLLVGLWTSIWIAALSIFIGLLIGTVFGVL-RTMLNKIIRCILRVYMEIFR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I     L+     Y +++  P     N+       P      +A S + AA  ++IVR  
Sbjct: 67  ILPSVVLL-----YLVYYILPRSLHINW-------PGTWMAVLAFSLWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP  Q E+ +ALGL+  +    VLLPQA +  +P   +    ++K +S+ + +   D
Sbjct: 115 LQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLELPATINLATRVIKTTSILMLISVMD 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           +++VG  II    Q        +  +  F Y  L   ++++   L AK
Sbjct: 175 VINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILDYPLSVWAKSLMAK 222



 Score = 44.2 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 45/97 (46%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +      S    +LVG   + W+A   +    +IGT+ G  R   NK++  I RVY+E+F
Sbjct: 6   INVLFSGSNFDRLLVGLWTSIWIAALSIFIGLLIGTVFGVLRTMLNKIIRCILRVYMEIF 65

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R +P +V+++ +Y  +   L I      +    F   
Sbjct: 66  RILPSVVLLYLVYYILPRSLHINWPGTWMAVLAFSLW 102


>gi|320177111|gb|EFW52127.1| putative amino-acid ABC transporter permease protein yhdX [Shigella
           dysenteriae CDC 74-1112]
          Length = 155

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 59/150 (39%), Positives = 83/150 (55%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +      FL+NRGL  P+  +      F+ + V+ IVLS+   R ++ +  KT +     
Sbjct: 1   MSAFDLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTRQLRRTW 60

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
             +  LI GLP L        LH+D P L  FNF GG  + PE  +L +ALS YT+AFIA
Sbjct: 61  PFAAVLIIGLPLLAQWLFGAALHWDVPALRGFNFRGGMVLIPELAALTLALSVYTSAFIA 120

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           EI+R+G  AVP GQ EAA +LGL + ++  
Sbjct: 121 EIIRAGSQAVPYGQHEAARSLGLRYARSLF 150


>gi|120608917|ref|YP_968595.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           citrulli AAC00-1]
 gi|120587381|gb|ABM30821.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Acidovorax citrulli AAC00-1]
          Length = 228

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 193 SFVLGIVLS---LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +F LG+  +   L           +  +  PL ++    +  +     +     + F  P
Sbjct: 22  AFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLYVEAIRNTPFLVQLMFVFFGLP 81

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L             E+ +  +       A++ EIVR+G+   PRGQ+EAA ALG+    
Sbjct: 82  SL--------GLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQLEAASALGMGRWA 133

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+L  A++ + P L+SQ + ++  +S+   +   DL      I ++  +A E  ++
Sbjct: 134 CFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANFIQSRNFRAFETYIV 193

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +Y +L++++   +  +   + +  +
Sbjct: 194 VTALYFALALLLRQALAWIGQHVIVARR 221


>gi|91783384|ref|YP_558590.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91687338|gb|ABE30538.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 279

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 20/214 (9%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
                 S V G++L +           +  + + L  ++         + L A+ Y L F
Sbjct: 80  LAAMCVSLVTGVLLCVGTVA-----QTRWIRFIALGIVNLLR-NTPWLIALYAMLYLLPF 133

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             PV       G       F+     LS    A +AE +R G+ A+P GQ E+A ALG  
Sbjct: 134 YVPV------FGVVIPFSPFVKAVAGLSLPVTANVAEAMRGGIEAIPSGQWESARALGYR 187

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +  R V++PQA+  I+P + + +  L   SSLAV  G +D++SV  TI    G     
Sbjct: 188 KNQILRYVIVPQAIPFIMPNMMTVFAMLFIGSSLAVVTGTSDVLSVANTITASDGSH--- 244

Query: 367 ILIWMFIYL-----SLSIMIALFMNRLNAKIALK 395
               + +Y+       +  IA    RL  ++  K
Sbjct: 245 YATAVQMYVLLLFFLFAFPIATLARRLERQMREK 278


>gi|238750616|ref|ZP_04612116.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
 gi|238711264|gb|EEQ03482.1| Polar amino acid ABC transporter, inner membrane subunit [Yersinia
           rohdei ATCC 43380]
          Length = 198

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 15/208 (7%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M     I + + V+G +       +  H                +LI G P L  +A+ Y
Sbjct: 1   MGVTLVISMSAAVMGAIAGFILQAVCCHNRW----LFWPWRTYVWLIRGTPYLAQLAVFY 56

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F             +  ++L+ Y++A+  EI R+   ++  GQ+EAA  
Sbjct: 57  -----------FGLPAIGLTLSAIEATVLSLAIYSSAYFGEIFRTAWKSIGHGQLEAAQV 105

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
             ++   +   +  PQA R  +P L +Q++  +K S++A  +   +L    G I+  T  
Sbjct: 106 HDISAWYSFWYIQTPQAWRFSLPLLGNQFILTIKESAVASIITVPELTMTTGQIVANTYT 165

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNA 390
            I    + +  Y  L+  I++ +  L+ 
Sbjct: 166 YIVPYTLLILSYWLLAQGISVGVRLLSR 193


>gi|209552184|ref|YP_002284100.1| polar amino acid ABC transporter inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539777|gb|ACI59708.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 217

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 14/211 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
               + V  F LG +L+L     +R       +A    +IS  ++ G+P +  + L +  
Sbjct: 17  MTFLVAVTCFALGAILAL-PVSFARLSENGFARAFASTFIS--VVRGVPPITWLFLIF-- 71

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
            +  P L                +  + L+    A+IAE  RSG +A+P GQ+EAA ALG
Sbjct: 72  -YGLPQL--------GLKFSSLSAAVVGLTMMCTAYIAEFYRSGWLAMPAGQIEAAKALG 122

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           LT   A R V+ PQ    ++P   + ++ LLKNS++   +G +D+     +         
Sbjct: 123 LTEFAAFRKVIAPQVFVIVLPMAITYFIALLKNSAVVSVIGVSDVTDRALSESRSAPDPF 182

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            + +   F+Y+++S+ I L     +  +A +
Sbjct: 183 NVFIAAGFVYMAVSVPIGLAGRFTSPWVARR 213



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 33/103 (32%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   I  G   TF +A +      I+   V   RLS N         ++ V R +PP+  
Sbjct: 7   YFPLIAKGLSMTFLVAVTCFALGAILALPVSFARLSENGFARAFASTFISVVRGVPPITW 66

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNA 187
           +F ++  +  +            G+ +               A
Sbjct: 67  LFLIFYGLPQLGLKFSSLSAAVVGLTMMCTAYIAEFYRSGWLA 109


>gi|222081073|ref|YP_002540436.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221725752|gb|ACM28841.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 221

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 91/228 (39%), Gaps = 14/228 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
             F   +    L           +I + SFV+G ++++    ++     +TG    L   
Sbjct: 4   YQFYWSIVWDALPQLLAGAWVTVQITILSFVIGTLIAMP---MAVARQRETGLGYRLATA 60

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P L  + + Y           F           ++S+  A+S   A ++AEI
Sbjct: 61  WVELSRNTPVLFQVFMIY-----------FGLGALGINISSYISVLAAISFNNAGYLAEI 109

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
            R G+ A+PR Q  AA +LG+T  ++   V+ PQ  + I     +Q +  + N+SL + V
Sbjct: 110 FRGGIAAIPRQQFSAARSLGMTSFQSFMHVVFPQVFQVIFLAFVTQGIWGMLNTSLGMLV 169

Query: 345 GFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           G  +L        + + +  E  ++    Y  ++  + L  + +   +
Sbjct: 170 GLRELAGAAQYAQSVSFRTFEFFIVTAGFYYVIAKALQLSAHLVFKLM 217



 Score = 38.0 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  +     +  T+I   +   R     L   +   +VE+ RN P L  +F +
Sbjct: 18  LLAGAWVTVQITILSFVIGTLIAMPMAVARQRETGLGYRLATAWVELSRNTPVLFQVFMI 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + ++       I +   +  NN
Sbjct: 78  YFGLGALGINISSYISVLAAISFNN 102


>gi|322833089|ref|YP_004213116.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
 gi|321168290|gb|ADW73989.1| binding-protein-dependent transport systems inner membrane
           component [Rahnella sp. Y9602]
          Length = 228

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 14/227 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F   L  R        +     +   + VL ++  +    L+  F   T K   +L+I 
Sbjct: 11  NFTYLLWGRLADGEPGGVLLTLIMAASAGVLALLAGVLMAALAWRFGGWTRK---ILFIW 67

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
              I G+P   LI + + L+F  PV+      GGS   P  +++ +AL+ +T+A +    
Sbjct: 68  ASFIRGIP---LIFVIFWLYFLLPVV-----FGGSIPGP--LTVILALAWFTSAAVMHST 117

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
            +GL A+PRGQ EA IA G+++ K    VLLPQA  +++P      ++L+K++SLA  V 
Sbjct: 118 LAGLEALPRGQTEAGIASGMSYGKVLLFVLLPQAWPNLLPSYLGLLISLVKDTSLAFIVN 177

Query: 346 FADLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
             +L +V G + N+      EI L+   +Y  L + +A    R+  K
Sbjct: 178 VPELTTVAGQVNNRVQIYPAEIFLLVGLMYYLLCVTLAYLAGRVVRK 224


>gi|261884771|ref|ZP_06008810.1| amino acid ABC transporter, permease protein PEB1 [Campylobacter
           fetus subsp. venerealis str. Azul-94]
          Length = 186

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 18/187 (9%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
           P         +       S    T+  +    + + V+G++  + A          TGK 
Sbjct: 6   PFALWKWEDTLAHWQMFASGLGFTLGVSILALILAGVIGVISGMMA----------TGKI 55

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
             L Y S   +       L+   + L+F  P +              F    + +  Y  
Sbjct: 56  AILRYCSRIYVEVFQNTPLVIQLFFLYFALPPM--------GINLDVFTIGVLGIGAYHG 107

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
           A+++E+VRSG+ ++P+GQ EAA + G ++ +    ++LPQ+++ I+PP T+Q +NL+KNS
Sbjct: 108 AYMSEVVRSGINSIPKGQFEAATSQGFSYIEQMMYIILPQSIKIILPPATNQTVNLIKNS 167

Query: 339 SLAVAVG 345
           S+ + + 
Sbjct: 168 SVLLIIA 174



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 43/99 (43%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +    ++      G   T  ++   +I A +IG + G        ++ +  R+YVEVF+N
Sbjct: 12  WEDTLAHWQMFASGLGFTLGVSILALILAGVIGVISGMMATGKIAILRYCSRIYVEVFQN 71

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLS 177
            P ++ +FFLY ++  +    D   +   G+   +    
Sbjct: 72  TPLVIQLFFLYFALPPMGINLDVFTIGVLGIGAYHGAYM 110


>gi|237740704|ref|ZP_04571185.1| amino acid permease [Fusobacterium sp. 2_1_31]
 gi|229422721|gb|EEO37768.1| amino acid permease [Fusobacterium sp. 2_1_31]
          Length = 226

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 22/224 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + GI+  LF             + +  +Y+ T  I     L
Sbjct: 19  LYGLWITIKLSLISAILSIIFGILFGLFM-----VIKNPITRIISQIYLQTIRIMPP--L 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ + Y              + G  +SPE  S  I  + +  A + ++VR  + ++P+ 
Sbjct: 72  VLLFIAYF---------GVTRMYGVHISPE-ASAIIVFTIWGTAEMGDLVRGAIESIPKI 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+E+A AL L  ++    V++PQ +R +IP   +    ++K +SL V +G  +++ VG  
Sbjct: 122 QIESATALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQ 181

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           II+         AI I  +   +Y      +++    L  + + 
Sbjct: 182 IIDTNRFQYPNGAIWIYGVIFLLYFLSCWPLSMLAKFLEKRWSR 225



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 79/213 (37%), Gaps = 5/213 (2%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++   S  +    +L G   T  L+    I + I G L G   +  N +   I ++Y++
Sbjct: 4   TVIDLLSKGTNFERLLYGLWITIKLSLISAILSIIFGILFGLFMVIKNPITRIISQIYLQ 63

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
             R +PPLV++F  Y  V  +  +          +F          L       I     
Sbjct: 64  TIRIMPPLVLLFIAYFGVTRMYGVHISPEASAIIVFTIWGTAEMGDLVRGAIESIPKIQI 123

Query: 195 VLGIVLSL--FATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
                L+L      L     +   + +PL + + T +I     +VLI +   L   + ++
Sbjct: 124 ESATALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQII 183

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              +F +  G+      + L   LSC+  + +A
Sbjct: 184 DTNRFQYPNGAIWIYGVIFLLYFLSCWPLSMLA 216


>gi|153951032|ref|YP_001398495.1| His/Glu/Gln/Arg/opine ABC transporter permease [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152938478|gb|ABS43219.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Campylobacter jejuni subsp. doylei 269.97]
          Length = 218

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 14/170 (8%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
            +  +P LV + + Y   F  P    ++            +  I  S +    + ++VR 
Sbjct: 59  FVRVMPLLVWLFVAY---FGFPRWFGWDL-------SSVSAAIIVFSIWGCFEMMDLVRV 108

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L ++P+ Q E+A +LGL   ++   +++PQAMR + P   +    ++K+++ A  +G  
Sbjct: 109 SLQSIPKHQYESASSLGLNTVQSFIYIIIPQAMRRLTPMSMNLLTRMIKSTTFAYLIGAV 168

Query: 348 DLVSVGGTIIN----QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           +LV VG  II            I  +  FI+  L   I L+  +L  K +
Sbjct: 169 ELVKVGQQIIEFHNRNDFAPFIIYGLIFFIFFILCYPITLYSRKLEKKWS 218


>gi|328885477|emb|CCA58716.1| putative glutamate transport protein [Streptomyces venezuelae ATCC
           10712]
          Length = 224

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 11/225 (4%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L    +T        + S + G  L+       R       +     Y++      L
Sbjct: 10  YDLLGAFWVTAQLALYSAIGSLIWGTALAAM-----RVSPVPLMRGFGTTYVNLVRNTPL 64

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             +++        F              +    F    + L  YT  F+ E +RSG+  V
Sbjct: 65  TVVIV-----ACSFGLDQTLGITLGADRSEDIGFRLAILGLIAYTGTFVCEALRSGINTV 119

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
           P GQ EAA ALGL   +   LV+LPQA R+ + PL +  + L KN+++A A+G A+   +
Sbjct: 120 PPGQAEAARALGLNFVQVLTLVVLPQAFRAAVAPLANVLIALTKNTTVAAAIGAAEAAVL 179

Query: 353 GG-TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
               I N+T     +  ++ F ++ L++   LF+     ++A+K 
Sbjct: 180 MKEMIENETDALFAVFAVFAFGFIVLTLPTGLFLGWAAKRLAVKR 224



 Score = 42.2 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 28/64 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  LA    I + I GT + A R+S   L+      YV + RN P  VVI   
Sbjct: 12  LLGAFWVTAQLALYSAIGSLIWGTALAAMRVSPVPLMRGFGTTYVNLVRNTPLTVVIVAC 71

Query: 149 YKSV 152
              +
Sbjct: 72  SFGL 75


>gi|328948881|ref|YP_004366218.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
 gi|328449205|gb|AEB14921.1| polar amino acid ABC transporter, inner membrane subunit [Treponema
           succinifaciens DSM 2489]
          Length = 234

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 93/230 (40%), Gaps = 18/230 (7%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
           F +    +        +    +I   S V  I+L      L       T K  P+  I  
Sbjct: 14  FSVIFMGKNFLRLLQGLLVTIEIAAVSVVFSIILGFLLGALM------TVKIKPIQIICK 67

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
             +  +  +  + L +  +F        +  G         +  +  + +  A + ++VR
Sbjct: 68  IYLEFMRIMPQLVLLFLAYFGLTRAFGISISGE-------AASVLVFTLWGTAEMGDLVR 120

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
             L ++PR Q E+A ++GL  ++    V++PQ +R +IP   +    ++K +S+ V VG 
Sbjct: 121 GALESIPRHQYESAKSIGLNEKQIYIYVIIPQTLRRLIPLAMNLITRMIKTTSIVVFVGV 180

Query: 347 ADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
            ++V +G  II+     +      +  +  F+Y  +   +++   +L  +
Sbjct: 181 IEVVKIGQQIIDANRLTVPTAAIAVYAVIFFMYFIVCWPLSILAGKLEKR 230



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   ++ + I+G L+GA      K +  IC++Y+E  R +P LV++F  
Sbjct: 26  LLQGLLVTIEIAAVSVVFSIILGFLLGALMTVKIKPIQIICKIYLEFMRIMPQLVLLFLA 85

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  +     I          +F   
Sbjct: 86  YFGLTRAFGISISGEAASVLVFTLW 110


>gi|294678297|ref|YP_003578912.1| polar amino acid ABC transporter permease HisM [Rhodobacter
           capsulatus SB 1003]
 gi|294477117|gb|ADE86505.1| polar amino acid ABC transporter, permease protein HisM
           [Rhodobacter capsulatus SB 1003]
          Length = 277

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 9/179 (5%)

Query: 225 STFLIFGLPTLVLIALKYQLHFDKP---VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
             F+  G P  +   L Y++    P   +      I     +  +    + L   T+A+ 
Sbjct: 81  FIFVFRGSPLFIQFFLAYEILVQLPKAGITLGGLIIPTDWTTSAWAGALLVLFLNTSAYS 140

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AEI    L+AVP+G +EAA A GLT  +  R +L P  +R   P  T++ + L   +++ 
Sbjct: 141 AEIFHGALMAVPKGDIEAADAYGLTGWQKFRRILWPTTLRLAWPAYTNEAIFLFHATTIV 200

Query: 342 VAVGFA------DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
              GF       D +       ++T        I  F ++ +++ +      +N ++  
Sbjct: 201 FFSGFPAYQQRGDALYYAKFFADKTFNPFIPYPIAAFYFILVTLTLIGLFGMINRRLNR 259


>gi|291519753|emb|CBK74974.1| ABC-type amino acid transport system, permease component
           [Butyrivibrio fibrisolvens 16/4]
          Length = 108

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 59/107 (55%)

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           AVP GQ EA  +LG  + +    +++PQ +++++P L ++++ L+K +S+A  +G  DL 
Sbjct: 2   AVPEGQFEAGRSLGFNYIQTMFHIIIPQMVKNVLPALCNEFIVLIKETSIAGYIGITDLT 61

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
             G  I  +T  A   +     IYL L +++   + +L  ++   E+
Sbjct: 62  KAGDLIRGRTFSAFLPLFGVAAIYLLLVLVLTYLVGKLERRLRANER 108


>gi|291460390|ref|ZP_06599780.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291416957|gb|EFE90676.1| amino acid ABC transporter, permease protein [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 246

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 22/200 (11%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+  +  TR          KAL  +Y+    I        + L + ++F        + 
Sbjct: 61  GILFGMLMTR-----RNPLTKALSRIYLDFIRIMP-----QLVLLFLVYFGTARAFALSL 110

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
            G        +S  I    +  A + ++VR  L+++PR Q E+A ALGLT  +    +++
Sbjct: 111 SGE-------LSAVIVFVLWGTAELGDLVRGALVSIPRIQYESAAALGLTPLQTAFFIII 163

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-----QAIEIILIWM 371
           PQ +R +IP   +    ++K SSL V +G  +++  G  II+         A+ I  +  
Sbjct: 164 PQTVRRLIPLAINLVTRMVKTSSLVVLIGVVEVLKTGQQIIDANRFRYPTAALPIYGVIF 223

Query: 372 FIYLSLSIMIALFMNRLNAK 391
            +Y  +   I+LF   L  +
Sbjct: 224 LLYFLVCWPISLFAGCLEKR 243


>gi|186473373|ref|YP_001860715.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
 gi|184195705|gb|ACC73669.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia phymatum STM815]
          Length = 214

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 85/227 (37%), Gaps = 14/227 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
           +N                + V S VLGI L L    L R         + + Y+S     
Sbjct: 1   MNAFDYWSIAQGALATVVLSVVSIVLGIPLGLGL-ALIRWARVPFLNRIVVAYVSLIRSC 59

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
              TL L+       F   +                 +  +AL+  TAAF  EI R+ LI
Sbjct: 60  PAVTLTLLIFFALPQFGISL-------------DPTPAAILALTISTAAFNCEIWRAALI 106

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
             PR Q +AA+A  +      R +++PQ  RS +P L ++    +K++     +G  ++ 
Sbjct: 107 NFPRDQYDAALAFAMPRTVRFRRIVMPQIWRSSLPGLVNEMTLQIKSTPAVAVIGIVEIT 166

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
                +  +T   +   +  + +Y  +  ++      +  +  ++ +
Sbjct: 167 RAALRVGARTYDPLPPFVFALVLYGLIVFVLVKTQRVIERRQPVEAR 213


>gi|269219725|ref|ZP_06163579.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269210967|gb|EEZ77307.1| amino acid ABC transporter, permease protein [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 225

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 91/228 (39%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +    R        + T+  I + +  + I   LF   ++     +  + L   Y+    
Sbjct: 8   VLWQGRNFLRLLEGLWTSVSIALLALAISIFFGLFVG-IAMTSKRRFLRFLTRAYLEFVR 66

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
                    + L + ++F        N  G       F +  I  S + +A + ++VRS 
Sbjct: 67  FMP-----QLVLLFVVYFSLATHTGVNLGG-------FTTAVIVFSVWGSAEMGDLVRSA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + ++P  Q  +  ALG+T  +    V+LPQ +R ++P   +    ++  +SL V +G  +
Sbjct: 115 VQSIPAHQYASGFALGMTKAQVNLNVILPQTVRRLLPLTINLANRMIMTTSLVVLIGVTE 174

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           ++ VG  II+    A       +      +Y ++  +I+ F   L  K
Sbjct: 175 VLKVGQQIIDANRFAYPKAALWVYGAIFLLYFAVCYVISQFSKYLERK 222



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 2/153 (1%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  +A   +  +   G  VG    S  + + ++ R Y+E  R +P LV++F +
Sbjct: 18  LLEGLWTSVSIALLALAISIFFGLFVGIAMTSKRRFLRFLTRAYLEFVRFMPQLVLLFVV 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL--FATR 206
           Y S+ +   +          +F          L       I    +  G  L +      
Sbjct: 78  YFSLATHTGVNLGGFTTAVIVFSVWGSAEMGDLVRSAVQSIPAHQYASGFALGMTKAQVN 137

Query: 207 LSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           L+    +   + LPL       +    +LV++ 
Sbjct: 138 LNVILPQTVRRLLPLTINLANRMIMTTSLVVLI 170


>gi|295096063|emb|CBK85153.1| amino acid ABC transporter membrane protein 2, PAAT family (TC
           3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 228

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 18/193 (9%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GIVL+  A R         G     L+    LI G+P   LI + + + +  P++   + 
Sbjct: 46  GIVLACVAWRY-------PGVVRSALFAWAELIRGIP---LIFVIFWMWYLLPLITGRDL 95

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                  P   ++ +AL+ +TAA +   V +GL A+P GQ EAA++ G + ++    VLL
Sbjct: 96  -------PGATTVTLALAWFTAAAVMHSVLAGLRALPSGQNEAALSQGFSTQQTLWRVLL 148

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIEIILIWMFIYL 375
           PQA+R+I+P L   +++LLK++SLA  V   +L +V G I N+       I +    IY 
Sbjct: 149 PQALRNILPSLVGIFISLLKDTSLAFIVNVPELTTVAGQINNRVQIYPAAIFIFTGVIYY 208

Query: 376 SLSIMIALFMNRL 388
            L   + L   R 
Sbjct: 209 LLCCSLELLAKRW 221


>gi|227508306|ref|ZP_03938355.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227511318|ref|ZP_03941367.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227085471|gb|EEI20783.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus buchneri ATCC 11577]
 gi|227192195|gb|EEI72262.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 219

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 11/203 (5%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFN 255
           G VL+L+       F    G  +  L  S F  F +P L  IA  Y ++  + P+L Q  
Sbjct: 16  GFVLTLWL-----SFVGIIGSIIVGLICSLFQYFKVPILHQIASVYVEISRNTPLLIQLF 70

Query: 256 FIGGSTVSPEF-----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           F+  +           +   I L     +++AE    G   V +GQ+E+  A+GL+  + 
Sbjct: 71  FLYYAFPVIGIKFGAELCGIIGLIFLGGSYMAEGFTGGFNGVSKGQVESGKAIGLSRWQL 130

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + V+ PQ     +P + +  + L+K +S+   +   +L +    +I    ++ E +L+ 
Sbjct: 131 AKYVVFPQGFSLSVPAMAANIIFLIKETSIFTVIAIPELTNTALDLIGMYYRSNEYLLVL 190

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
           +  Y  + + +++ +  L  ++ 
Sbjct: 191 VIGYAIILVPLSIVLTLLEKRVR 213



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GFV T WL+F G+I + I+G +    +     ++  I  VYVE+ RN P L+ +FFL
Sbjct: 13  FGKGFVLTLWLSFVGIIGSIIVGLICSLFQYFKVPILHQIASVYVEISRNTPLLIQLFFL 72

Query: 149 YKSVL 153
           Y +  
Sbjct: 73  YYAFP 77


>gi|184155296|ref|YP_001843636.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
 gi|183226640|dbj|BAG27156.1| ABC transporter permease component [Lactobacillus fermentum IFO
           3956]
          Length = 219

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +A   V S ++G+++SL        F     + +  +Y+   +    P L+ +   Y 
Sbjct: 22  WLSAVGIVGSLIVGVIVSLVQF-----FRVPVLRQVCTVYVE--ISRNTPLLIQLFFLYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F              + L     +++AE    G   V +GQ+E   A+
Sbjct: 75  -----------AFPVIGLKMNAVTCGIVGLIFLGGSYMAEGFTGGFAGVSKGQLETGKAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +  R V+ PQ     +P L +  + L+K +S+   +   +L +    +I    ++
Sbjct: 124 GMNQWQLARYVVFPQGFALSMPALAANVIFLIKETSIFSVIAIPELTNTALDLIGLYYRS 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            E +L+ +  Y  + I + L +N L  ++ 
Sbjct: 184 NEYLLVLVIGYAIILIPLILVLNWLERRVR 213



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T WL+  G++ + I+G +V   +     ++  +C VYVE+ RN P L+ +FFL
Sbjct: 13  FEQGLIATLWLSAVGIVGSLIVGVIVSLVQFFRVPVLRQVCTVYVEISRNTPLLIQLFFL 72

Query: 149 YKSVL 153
           Y +  
Sbjct: 73  YYAFP 77


>gi|167041374|gb|ABZ06127.1| putative binding-protein-dependent transport system inner membrane
           component [uncultured marine microorganism
           HF4000_005K23]
          Length = 420

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 102/252 (40%), Gaps = 14/252 (5%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
                L  +       ++  G+F      +     +     + +F+ +    +      L
Sbjct: 180 YIIIFLLFIFPFIAISLISGGIFGLKWVATNAWGGLSLTFIVAIFAMLFCFPVG-MLFAL 238

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
            R       K   + +I  +    L T++ +A           +    F+   T   + +
Sbjct: 239 GRRSSYPVIKYTSIGFIEFWRGVPLITVLFMA----------SVMFPMFLPDGTYMDKLV 288

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            + IA++ + AA++AE++R GL A+P+GQ +A+ +LG+ + +   L++LPQA++  IP +
Sbjct: 289 RVIIAITLFEAAYMAEVIRGGLQALPKGQYDASKSLGMGYWRMHLLIILPQALKITIPGI 348

Query: 328 TSQYLNLLKNSS---LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            + ++ L K++    +   +    ++ +     +  G A E  +    +Y      ++ +
Sbjct: 349 ANTFIALFKDTPLILVVGLLELLGMIDMAKANPDWLGFAREGYVFAAIVYWIFCYSMSRY 408

Query: 385 MNRLNAKIALKE 396
              L  K     
Sbjct: 409 SQNLERKYKTDR 420



 Score = 39.5 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   TF +A   M+    +G L   GR S+  ++ +    ++E +R +P + V+F     
Sbjct: 214 GLSLTFIVAIFAMLFCFPVGMLFALGRRSSYPVIKYTSIGFIEFWRGVPLITVLFMASVM 273

Query: 152 VLSVLPIPDHSIVL 165
               LP   +   L
Sbjct: 274 FPMFLPDGTYMDKL 287


>gi|146278101|ref|YP_001168260.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
 gi|145556342|gb|ABP70955.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17025]
          Length = 226

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 23/225 (10%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L+    T+   A +      LG+VL+              G  L   +I  F   G 
Sbjct: 22  PDMLAGVWTTIWLAAAVIALGLSLGLVLACLRAY---------GWRLANFFIICFADMGR 72

Query: 233 PT--LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
               LVLI + Y           F   G     P  + L + L    AAF  EI  +GL 
Sbjct: 73  ALPPLVLILIIY-----------FGLPGLGLRVPGPLVLILVLGTVLAAFAEEIFWAGLT 121

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +VP+GQ EA  A GL   +    + LPQA R  +PPL ++ L + K ++L   +G ++++
Sbjct: 122 SVPKGQWEAGRATGLGFTQTLIQIALPQAARLALPPLVNRVLAISKMTALGSVIGVSEIL 181

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           SV  T  + TG A   + +    Y+ + + + +    L  + A K
Sbjct: 182 SVASTAQSFTGSAAP-LTMGAIAYVIVFLPLVVLTRLLERRFAWK 225


>gi|85707348|ref|ZP_01038431.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. 217]
 gi|85668156|gb|EAQ23034.1| putative amino acid ABC transporter permease protein [Roseovarius
           sp. 217]
          Length = 241

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 1/143 (0%)

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F           F+SL I ++   A ++ E  R  L A+P  Q  A  +LGLT  +A
Sbjct: 96  MAHFGVASFGIHFSPFVSLLIGITFNNAGYLTENFRGALKAIPDTQGRAGRSLGLTQLQA 155

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGGTIINQTGQAIEIILI 369
            R +++PQ +R    P+T+Q +  +  +SL V VG  +DL  V   +   T +  E+  +
Sbjct: 156 FRHIIMPQMLRISFLPMTNQMVWAILMTSLGVTVGMNSDLYGVTQDLNALTFRTFELFAL 215

Query: 370 WMFIYLSLSIMIALFMNRLNAKI 392
              I+  ++  I      + A++
Sbjct: 216 AGVIFYLITKAITFGGRLIAARL 238



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G + T  +A   M    ++  L+   RLS ++ +      +VE+ RN P L  I+  
Sbjct: 38  MLDGAMVTMEIAILSMGLGILLAILLTVMRLSGSRPLMAFATTWVEIARNTPALFQIYMA 97

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  V S        + L  G+  NN G           A 
Sbjct: 98  HFGVASFGIHFSPFVSLLIGITFNNAGYLTENFRGALKAI 137


>gi|326790344|ref|YP_004308165.1| polar amino acid ABC transporter inner membrane protein
           [Clostridium lentocellum DSM 5427]
 gi|326541108|gb|ADZ82967.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium lentocellum DSM 5427]
          Length = 215

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 4/207 (1%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           +   + G+ L+L     +       G  L L+      +F      L A+  ++    P 
Sbjct: 10  ILFMLDGLKLTLLIALGTIILSIIFGTILALMRNYCKGVFSPFA-TLAAIYIEIFRCTPN 68

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +    +I  +           + + +T+A +AEIVR GL ++P+GQ E A + G    + 
Sbjct: 69  ILWILWIRFTIPGDPIPLGIFSFTLFTSAVVAEIVRGGLNSIPKGQFEGAASQGFNFAQT 128

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEII 367
              ++LPQ  +SIIP L SQ + ++K++S    V  A+       ++      GQ I + 
Sbjct: 129 LIYIILPQTFKSIIPALLSQVITIIKDTSFLKVVDIAEFTRNSNVVLGSLRGFGQIIMLY 188

Query: 368 LIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 Y  ++  ++  + +   +I +
Sbjct: 189 GFVALTYFVINFALSCVVRQYQRRITI 215



 Score = 36.5 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS---ANKLVAWICRVYVEVFRN 138
            S     +L G   T  +A   +I + I GT++   R          A +  +Y+E+FR 
Sbjct: 6   TSENILFMLDGLKLTLLIALGTIILSIIFGTILALMRNYCKGVFSPFATLAAIYIEIFRC 65

Query: 139 IPPLVVIFFL 148
            P ++ I ++
Sbjct: 66  TPNILWILWI 75


>gi|152968869|ref|YP_001333978.1| amino acid ABC transporter membrane protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238893278|ref|YP_002918012.1| glutamate/aspartate transport system permease component [Klebsiella
           pneumoniae NTUH-K2044]
 gi|330006744|ref|ZP_08305698.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
 gi|150953718|gb|ABR75748.1| putative amino acid transport protein (ABC superfamily, membrane)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238545594|dbj|BAH61945.1| glutamate/aspartate transport system permease component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328535745|gb|EGF62185.1| ABC transporter, permease protein [Klebsiella sp. MS 92-3]
          Length = 229

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 18/201 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +   GI L+  A R         G    LL++   +I G+P   LI + + L +
Sbjct: 36  IGATLLALPGGIALAGLAWRYG-------GLVRRLLFLWAEIIRGIP---LIFVIFWLWY 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P  +++ +AL+ +TAA +   V +GL ++P+GQ EAA+  G  
Sbjct: 86  LLPMLTGGDL-------PGAVTVTLALAWFTAASVMHSVLAGLQSLPKGQYEAALTQGFA 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
             +  RLVLLPQA+R++ P L   ++ LLK++SLA  V   +L +V G + N+     + 
Sbjct: 139 PGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSLAFIVNVPELTTVAGQVNNRVQIYPLA 198

Query: 366 IILIWMFIYLSLSIMIALFMN 386
           I +    +Y  L   ++L  +
Sbjct: 199 IFVFTGAVYYLLCCGLSLLAS 219


>gi|22124841|ref|NP_668264.1| inner membrane ABC transporter permease [Yersinia pestis KIM 10]
 gi|45440528|ref|NP_992067.1| putative amino acid ABC transporter permease [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51595217|ref|YP_069408.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808738|ref|YP_652654.1| putative amino acid ABC transporter permease [Yersinia pestis
           Antiqua]
 gi|108811005|ref|YP_646772.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Nepal516]
 gi|145600151|ref|YP_001164227.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Pestoides F]
 gi|149364903|ref|ZP_01886938.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CA88-4125]
 gi|153947455|ref|YP_001402149.1| amino acid ABC transporter permease [Yersinia pseudotuberculosis IP
           31758]
 gi|162419614|ref|YP_001607784.1| amino acid ABC transporter permease [Yersinia pestis Angola]
 gi|165926646|ref|ZP_02222478.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165936022|ref|ZP_02224592.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011080|ref|ZP_02231978.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212889|ref|ZP_02238924.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399264|ref|ZP_02304788.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421700|ref|ZP_02313453.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423711|ref|ZP_02315464.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167468795|ref|ZP_02333499.1| amino acid ABC transporter, permease protein [Yersinia pestis FV-1]
 gi|170025545|ref|YP_001722050.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186894234|ref|YP_001871346.1| polar amino acid ABC transporter inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|218930281|ref|YP_002348156.1| putative amino acid ABC transporter permease [Yersinia pestis CO92]
 gi|229838867|ref|ZP_04459026.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229896360|ref|ZP_04511529.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Pestoides A]
 gi|229899436|ref|ZP_04514579.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229901224|ref|ZP_04516346.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Nepal516]
 gi|270489412|ref|ZP_06206486.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294504972|ref|YP_003569034.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Z176003]
 gi|21957670|gb|AAM84515.1|AE013696_8 putative inner membrane permease of ABC transporter [Yersinia
           pestis KIM 10]
 gi|45435385|gb|AAS60944.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|51588499|emb|CAH20107.1| putative amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774653|gb|ABG17172.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Nepal516]
 gi|108780651|gb|ABG14709.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Antiqua]
 gi|115348892|emb|CAL21849.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CO92]
 gi|145211847|gb|ABP41254.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Pestoides F]
 gi|149291316|gb|EDM41390.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis CA88-4125]
 gi|152958950|gb|ABS46411.1| amino acid ABC transporter, permease protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|162352429|gb|ABX86377.1| amino acid ABC transporter, permease protein [Yersinia pestis
           Angola]
 gi|165916167|gb|EDR34774.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165921574|gb|EDR38771.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165990080|gb|EDR42381.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166205676|gb|EDR50156.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960619|gb|EDR56640.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051768|gb|EDR63176.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057881|gb|EDR67627.1| amino acid ABC transporter, permease protein [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169752079|gb|ACA69597.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186697260|gb|ACC87889.1| polar amino acid ABC transporter, inner membrane subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681153|gb|EEO77247.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Nepal516]
 gi|229687838|gb|EEO79911.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229695233|gb|EEO85280.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229700636|gb|EEO88666.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Pestoides A]
 gi|262363036|gb|ACY59757.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis D106004]
 gi|262366960|gb|ACY63517.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis D182038]
 gi|270337916|gb|EFA48693.1| ABC transporter, permease protein [Yersinia pestis KIM D27]
 gi|294355431|gb|ADE65772.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis Z176003]
 gi|320016445|gb|ADW00017.1| putative amino acid ABC transporter, permease protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 222

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 14/220 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L      + T  ++ V + + GI L +    + R  +    + L   Y+   ++   
Sbjct: 11  WPYLPELLSGLLTTIELTVMATIGGIALGICGAAI-RCGNTVILRRLWGGYVE--IVRNT 67

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P +V +   + + F  P LG     G         +  +A++    A+  EI+RSG+ A 
Sbjct: 68  PFVVQL---FFIVFGLPALGLKLSAGQ--------AALLAMTINLGAYSTEIIRSGIQAS 116

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            +GQ EAA  LGL+  +    V+LP +++ I P L SQ + ++  S++   V F +L   
Sbjct: 117 AKGQWEAARVLGLSRSQTFFRVILPPSLQRIYPALVSQCIIVMLGSAVVSQVSFEELTFA 176

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
              I ++T  + E+ L+   +YL  +I++   +     + 
Sbjct: 177 ANLIQSRTFLSFEVYLVTTLLYLLFAIVMRQLLLAAGRRY 216



 Score = 43.0 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 40/113 (35%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + + +   Y   +L G + T  L     I    +G    A R     ++  +   YVE+ 
Sbjct: 5   LNFAALWPYLPELLSGLLTTIELTVMATIGGIALGICGAAIRCGNTVILRRLWGGYVEIV 64

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           RN P +V +FF+   + ++             M +N    S   +     A  
Sbjct: 65  RNTPFVVQLFFIVFGLPALGLKLSAGQAALLAMTINLGAYSTEIIRSGIQASA 117


>gi|254302676|ref|ZP_04970034.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148322868|gb|EDK88118.1| ABC superfamily ATP binding cassette transporter membrane protein
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 226

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 93/223 (41%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    +FS + GI+  LF             K +  +Y+    I     L
Sbjct: 19  LYGLWVTIKLSLISAIFSIIFGILFGLFM-----VIKNPITKIISQIYLQAIRIMPPLVL 73

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           + IA     +F    +   +            S  I  + +  A + ++VR  + ++P+ 
Sbjct: 74  LFIA-----YFGVTRMYGIHISAE-------TSAIIVFTIWGTAEMGDLVRGAIESIPKS 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+E+A AL L  ++    V++PQ +R +IP   +    ++K +SL V +G  +++ VG  
Sbjct: 122 QIESATALALNKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQ 181

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+         AI I  +   +Y      +++    L  + +
Sbjct: 182 IIDTNRFQYPNGAIWIYGVIFLLYFLSCWPLSILAKFLEKRWS 224



 Score = 40.3 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 41/100 (41%)

Query: 74  QGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYV 133
             ++   S  +    +L G   T  L+    I + I G L G   +  N +   I ++Y+
Sbjct: 3   DTVIDLLSMGTNFERLLYGLWVTIKLSLISAIFSIIFGILFGLFMVIKNPITKIISQIYL 62

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           +  R +PPLV++F  Y  V  +  I   +      +F   
Sbjct: 63  QAIRIMPPLVLLFIAYFGVTRMYGIHISAETSAIIVFTIW 102


>gi|162148487|ref|YP_001602948.1| hypothetical protein GDI_2708 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161787064|emb|CAP56651.1| putative membrane protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 144

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 65/127 (51%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              A+      +IAEIV  GL +VP  Q+EAA+ L L      R V++PQA+  I+PP  
Sbjct: 18  AIWAIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIVPQALPVIVPPAV 77

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              +  +K+++LA  VG  +L   G  + N+    I++ L  + +Y +LS  +      L
Sbjct: 78  GYLVLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFALSYPLTRLSRML 137

Query: 389 NAKIALK 395
             ++AL 
Sbjct: 138 EKRLALS 144


>gi|732703|emb|CAA57062.1| gluC [Corynebacterium glutamicum]
          Length = 225

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 7/217 (3%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
              L    L    +T+       + + + G +L+       R    K  + L   YI+T 
Sbjct: 5   WADLGPSLLPAFWVTIKLTIYSAIGAMIFGTILTTM-----RVSPVKILRTLSTAYINTV 59

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               L TLV++   + L+ +  +           V   F    +    YT+ F+AE +RS
Sbjct: 60  RNTPL-TLVVLFCSFGLYQNLGLTLAGRESSTFLVDNNFRLAVLGFILYTSTFVAESLRS 118

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G+  V  GQ EAA +LGL      R ++ PQA+R+ I PL +  + L KN+++A  +G  
Sbjct: 119 GINTVHFGQAEAARSLGLGFGATFRSIIFPQAVRAAIVPLGNTLIALTKNTTIASVIGVG 178

Query: 348 DLVSVGG-TIINQTGQAIEIILIWMFIYLSLSIMIAL 383
           +   +   TI N       +  I+   ++ L+ + AL
Sbjct: 179 EASLLMKATIENHANMLFVVFAIFAVGFMILTCLWAL 215



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 38/97 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     I A I GT++   R+S  K++  +   Y+   RN P  +V+ F 
Sbjct: 12  LLPAFWVTIKLTIYSAIGAMIFGTILTTMRVSPVKILRTLSTAYINTVRNTPLTLVVLFC 71

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDT 185
              +   L +          +  NN  L+     + T
Sbjct: 72  SFGLYQNLGLTLAGRESSTFLVDNNFRLAVLGFILYT 108


>gi|218677478|ref|ZP_03525375.1| putative amino acid ABC transporter, permease protein [Rhizobium
           etli CIAT 894]
          Length = 188

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 12/158 (7%)

Query: 28  SVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERAGFEIDQG------------ 75
           ++Q+ +  L+ V+       V   + +  +     FL+  AGF+I +G            
Sbjct: 31  AIQLGIVALVVVLLGMLAYAVKAGLAEKGIRFSFSFLANTAGFDISEGWTLTSGEGFVPN 90

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
           +  ++S+ S A+A + G  NT  +A   +I +TI+GT++G GRLS N +V  +C   VE 
Sbjct: 91  LTQFSSEMSIASAFVTGIFNTAKIALLAIILSTILGTMLGVGRLSTNWVVRNLCFWIVEF 150

Query: 136 FRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            RN P L+ + F Y +V+   P    +  L  G+ ++ 
Sbjct: 151 VRNTPLLIQLVFWYFAVVLHFPPMASAAKLYGGLIVSQ 188


>gi|224823568|ref|ZP_03696677.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
 gi|224604023|gb|EEG10197.1| polar amino acid ABC transporter, inner membrane subunit [Lutiella
           nitroferrum 2002]
          Length = 222

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 3/128 (2%)

Query: 237 LIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQ 296
           LI L +       +   F+   G+     F     ALS   AA+ +E+ R   + V RGQ
Sbjct: 65  LIILIFYFGLSNFLADHFD---GAIEISPFFGGVFALSIIFAAYSSEVFRGAFLEVGRGQ 121

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
           +EA  A GL   +    + LP A R+ +P L + + +LLK++SL   VG  D++      
Sbjct: 122 LEAGQAYGLNRFQLFCFIRLPLAWRTALPSLNNMWQSLLKDTSLISVVGLEDMLRKAQIG 181

Query: 357 INQTGQAI 364
              T Q  
Sbjct: 182 AQYTKQPF 189


>gi|218458307|ref|ZP_03498398.1| general L-amino acid ABC transporter, permease protein [Rhizobium
           etli Kim 5]
          Length = 121

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 66/111 (59%)

Query: 2   IKNARKTVTRYFSRMKFLYDMRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGI 61
             ++       +S    LYD R+  I  QI+  +LL     W  +N   N+ ++N++ G 
Sbjct: 11  AVDSTHLPKSGWSFQTALYDPRIRGIFFQILTIVLLVAFVWWVAHNTAVNLARANIASGF 70

Query: 62  GFLSERAGFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGT 112
           GFL+ RAGFE+ Q ++ Y+SDS+Y  A+LVG +NT  +A +G+I ATIIG 
Sbjct: 71  GFLNGRAGFEVGQSLIAYSSDSTYGRALLVGLLNTLLIAVTGIITATIIGF 121


>gi|114763119|ref|ZP_01442545.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114544172|gb|EAU47181.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseovarius sp. HTCC2601]
          Length = 268

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 80/222 (36%), Gaps = 17/222 (7%)

Query: 179 PTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLI 238
               +       V  F L   L++      +       + L   +I  FL  G P  +  
Sbjct: 40  MIWNVYFGIVALVSGFFLATALAV-----GKASPRWLPRKLSEWFI--FLFRGSPLFIQF 92

Query: 239 ALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
              Y L      +        +  S  ++   + L   TAA+  EI    L++VP+G +E
Sbjct: 93  FFAYFLFLSLKSVSPIF----APFSSAWLGALVVLFFNTAAYSGEIFYGALLSVPKGDVE 148

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSV 352
           AA A G +     R ++ P  +R   P  T++ + L   ++L    GF       D +  
Sbjct: 149 AADAYGFSGWPRFRRIVWPTMLRLAWPAYTNEAIFLFHATTLVFFSGFPAWQQRGDALYY 208

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                ++T        I    ++ L+++I      +N ++  
Sbjct: 209 ANYFADKTFNPFVAYPILAGYFIVLTLLIIWLFGAINRRLNR 250



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 69  GFEIDQGIVPYTSDSSYATAILVG--FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVA 126
              I + ++P    +    A+L+G   +   +     ++    + T +  G+ S   L  
Sbjct: 14  SLGIGERLLPRDDFTLCKQAVLIGSGMIWNVYFGIVALVSGFFLATALAVGKASPRWLPR 73

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
            +   ++ +FR  P  +  FF Y   LS+
Sbjct: 74  KLSEWFIFLFRGSPLFIQFFFAYFLFLSL 102


>gi|170699698|ref|ZP_02890734.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
 gi|170135398|gb|EDT03690.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia ambifaria IOP40-10]
          Length = 255

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 18/211 (8%)

Query: 191 VFSFVLGIVLSLFA------TRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           + S V+GI L+L A       R S        +  PLL     L +G   +V        
Sbjct: 32  IASVVIGIPLALAASSRHVPYRWSARGWIMLIRGTPLLVQLYLLYYGFGQIV-------- 83

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
               P     +      +   F    +ALS    A++A I+R  +  VP G++EA  A G
Sbjct: 84  ----PREWMRDSWASPLLRDAFWYAVVALSVNEGAYVATILRGAIAGVPAGEIEAGYAYG 139

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           +T     R ++ P+A R  +P LT + + LLK++ LA  V   D++    T+  +T +  
Sbjct: 140 MTRAGVLRRIVGPRAWRLALPALTGEAILLLKSTVLASTVTVFDVMGTANTLRFETLRVY 199

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           E +     +Y+ L  ++ +   RL   +   
Sbjct: 200 EPLAGAALVYVVLVALLTIPAARLEKHLNRY 230



 Score = 37.6 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 41/120 (34%), Gaps = 2/120 (1%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            +    +L     T  L     I + +IG  +     S +    W  R ++ + R  P L
Sbjct: 10  DTVMPKLLAAVPTTLALLLLSGIASVVIGIPLALAASSRHVPYRWSARGWIMLIRGTPLL 69

Query: 143 VVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSL 202
           V ++ LY     ++P           +        +  + +  N   +V + + G +  +
Sbjct: 70  VQLYLLYYGFGQIVPREWMRDSWASPLL--RDAFWYAVVALSVNEGAYVATILRGAIAGV 127


>gi|171778292|ref|ZP_02919498.1| hypothetical protein STRINF_00340 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282992|gb|EDT48416.1| hypothetical protein STRINF_00340 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 218

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 18/228 (7%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           M      L      +     I + S ++ +VL      +      +  + +  +Y+    
Sbjct: 1   MLFQGNNLLRLLKGLLVTINISLVSILISVVLGFLFGFIM-ISRFRVIRFISQIYLEFIR 59

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I        + L + ++F        N  G        ++  I  S +  A + ++VR  
Sbjct: 60  IMP-----QLVLLFLVYFGLARTFNLNLSGE-------VAALIVFSMWGTAEMGDLVRGA 107

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L ++P+ Q+E+ +ALGL +R+    V++PQ +R ++P   +    ++K +SL V +G  +
Sbjct: 108 LTSLPKHQIESGLALGLNNRQLFIYVVMPQILRQLLPQAVNLMTRMIKTTSLIVLIGVVE 167

Query: 349 LVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           +V VG  II      +      I  +   +Y ++   I+     L  +
Sbjct: 168 VVKVGQEIIEANRLTVPSTAIWIYGLIFMMYFAVCFPISRLSVYLEKR 215



 Score = 39.5 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 38/78 (48%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++   ++ + ++G L G   +S  +++ +I ++Y+E  R +P LV++F +Y  +   
Sbjct: 18  TINISLVSILISVVLGFLFGFIMISRFRVIRFISQIYLEFIRIMPQLVLLFLVYFGLART 77

Query: 156 LPIPDHSIVLPFGMFLNN 173
             +     V    +F   
Sbjct: 78  FNLNLSGEVAALIVFSMW 95


>gi|290509891|ref|ZP_06549262.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
 gi|289779285|gb|EFD87282.1| amino acid ABC transporter, permease [Klebsiella sp. 1_1_55]
          Length = 224

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 89/237 (37%), Gaps = 17/237 (7%)

Query: 159 PDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKA 218
             +          +   L     T          S + G +L+             T   
Sbjct: 1   MSYHWDFSILWQYHAVLLEGILTTFKIVLASVTLSILGGALLAPLRGASRAVIRLPT--- 57

Query: 219 LPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTA 278
                    LI  + ++  + L    ++  P+L              +++  +A+S Y +
Sbjct: 58  -------QGLIEIVRSIPPLVLIVWAYYCLPILFGLTL-------SSYLTCVLAISLYGS 103

Query: 279 AFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNS 338
            F AEI RSG+ +V  G +EA +++G++       +  P A   I+P   SQ +  +KNS
Sbjct: 104 VFFAEIFRSGMQSVDHGLVEAGLSVGMSPLTVLVRITAPVAFLRILPAFVSQCVMSVKNS 163

Query: 339 SLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            LA  +   +++  G  +   T + +E +      +++  + ++L  +    +I  +
Sbjct: 164 VLASYIATGEILYQGQRLSTATFRPLETLTFVALFFVATILPLSLLASYAERRIRSR 220



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 38/76 (50%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            ++    Y   +L G + TF +  + +  + + G L+   R ++  ++    +  +E+ R
Sbjct: 6   DFSILWQYHAVLLEGILTTFKIVLASVTLSILGGALLAPLRGASRAVIRLPTQGLIEIVR 65

Query: 138 NIPPLVVIFFLYKSVL 153
           +IPPLV+I + Y  + 
Sbjct: 66  SIPPLVLIVWAYYCLP 81


>gi|260662190|ref|ZP_05863086.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
 gi|260553573|gb|EEX26465.1| ABC transporter permease component [Lactobacillus fermentum
           28-3-CHN]
          Length = 219

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 18/210 (8%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
             +A   V S ++G+++SL        F     + +  +Y+   +    P L+ +   Y 
Sbjct: 22  WLSAVGIVGSLIVGVIVSLVQF-----FRVPVLRQVCTVYVE--ISRNTPLLIQLFFLYY 74

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                       F              + L     +++AE    G   V +GQ+E   A+
Sbjct: 75  -----------AFPVIGLKMNAVTCGIVGLIFLGGSYMAEGFTGGFAGVSKGQLETGKAI 123

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           G+   +  R V+ PQ     +P L +  + L+K +S+   +   +L +    +I    ++
Sbjct: 124 GMNQWQLARYVVFPQGFALSMPALAANVIFLIKETSIFSVIAIPELTNTALDLIGLYYRS 183

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            E +L+ +  Y  + I + L +N L  ++ 
Sbjct: 184 NEYLLVLVIGYAIILIPLILVLNWLERRVR 213



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              G + T WL+  G++ + I+G +V   +     ++  +C VYVE+ RN P L+ +FFL
Sbjct: 13  FEQGLIATLWLSAVGIVGSLIVGVIVSLVQFFRVPVLRQVCTVYVEISRNTPLLIQLFFL 72

Query: 149 YKSVL 153
           Y +  
Sbjct: 73  YYAFP 77


>gi|315282710|ref|ZP_07871057.1| amino acid ABC transporter, permease protein [Listeria marthii FSL
           S4-120]
 gi|313613646|gb|EFR87443.1| amino acid ABC transporter, permease protein [Listeria marthii FSL
           S4-120]
          Length = 108

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 65/106 (61%), Gaps = 1/106 (0%)

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G +++  GQ E+A  LGLT+ +  R ++LPQ ++ ++P + ++ +NL+K+SSL   +G  
Sbjct: 1   GFLSIENGQYESAKVLGLTYGQTLRKIVLPQVVKRVLPAIGNEVINLVKDSSLVYILGIG 60

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           DL+  G   +++    I ++L+   IYL+L+ ++ +   +L  + +
Sbjct: 61  DLLRAGKIAMSRDVTLIPLVLVAA-IYLALTAILTILFKQLEKRFS 105


>gi|194292631|ref|YP_002008538.1| ABC transporter, permease protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193226535|emb|CAQ72486.1| putative ABC transporter, permease protein [Cupriavidus taiwanensis
           LMG 19424]
          Length = 263

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 8/202 (3%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S   G+VL+   T   R         + L           PTLV +   + L  +  +  
Sbjct: 65  SLAAGLVLAAMLTSGRRALAAPARAFVELT-------RNTPTLVQLYCAF-LVLNMLITQ 116

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           Q    G       F+ + I +S + A F AE +R+G+ AVPR  +EAA +L  + R+   
Sbjct: 117 QLASRGTGNPLTPFVWVVIVVSLHKAVFHAEALRAGIEAVPRITLEAARSLAFSRRQLLL 176

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V LP A+R  +P L +  ++L+K +++A A+   DL      I  Q    +E++L+ + 
Sbjct: 177 QVELPLAVRFALPALVNNVVDLVKMTAVASAIAVGDLTYEAIMIWTQRDNVLELLLLILA 236

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
            +  L+ +++     L  ++ +
Sbjct: 237 CFGLLTWLVSRAGRWLENRLRM 258


>gi|227523524|ref|ZP_03953573.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
 gi|227089289|gb|EEI24601.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus hilgardii ATCC 8290]
          Length = 219

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 90/203 (44%), Gaps = 11/203 (5%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFN 255
           G VL+L+       F    G  +  L  S F  F +P L  IA  Y ++  + P+L Q  
Sbjct: 16  GFVLTLWL-----SFVGIIGSIIVGLICSLFQYFKVPILHQIASVYVEISRNTPLLIQLF 70

Query: 256 FIGGSTVSPEF-----MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           F+  +           +   I L     +++AE    G   V +GQ+E+  A+GL+  + 
Sbjct: 71  FLYYAFPVIGIKFGAELCGIIGLIFLGGSYMAEGFTGGFNGVSKGQVESGKAIGLSRWQL 130

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            + V+ PQ     +P + +  + L+K +S+   +   +L +    +I    ++ E +L+ 
Sbjct: 131 AKYVVFPQGFSLSVPAMAANIIFLIKETSIFTVIAIPELTNTALDLIGMYYRSNEYLLVL 190

Query: 371 MFIYLSLSIMIALFMNRLNAKIA 393
           +  Y  + + +++ +  L  ++ 
Sbjct: 191 VIGYAIILVPLSIVLTLLERRVR 213



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 36/65 (55%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
              GFV T WL+F G+I + I+G +    +     ++  I  VYVE+ RN P L+ +FFL
Sbjct: 13  FGKGFVLTLWLSFVGIIGSIIVGLICSLFQYFKVPILHQIASVYVEISRNTPLLIQLFFL 72

Query: 149 YKSVL 153
           Y +  
Sbjct: 73  YYAFP 77


>gi|29829028|ref|NP_823662.1| glutamate transporter permease [Streptomyces avermitilis MA-4680]
 gi|29606134|dbj|BAC70197.1| putative glutamate ABC transporter permease [Streptomyces
           avermitilis MA-4680]
          Length = 221

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 10/231 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L    +T+       V S + G +L+       R       +     Y++
Sbjct: 1   MFDFLEGYDLLGAFWVTVKLTVFAGVGSLIWGTLLAAM-----RVGPVPLMRGFGTAYVN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L  ++L                 N    +  +  F    + L  YT+AF+ E +
Sbjct: 56  IVRNIPLTVIILFT-----SLGLSQTLGVNLGADTFETINFRLSVLGLIAYTSAFVCEAL 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP GQ EAA A+GL   +   L++LPQA RS++ PLT+  + L KN+++A A+G
Sbjct: 111 RSGINTVPVGQAEAARAIGLNFTQVLTLIVLPQAFRSVVGPLTNVLIALTKNTTVAAAIG 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+  ++   +I    Q I I  ++ F ++ L++   L +  ++ K+A+K 
Sbjct: 171 VAEAAALMKEMIENEAQLILISAVFAFGFVCLTLPTGLILGWVSKKVAVKR 221



 Score = 43.4 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     + + I GTL+ A R+    L+      YV + RNIP  V+I F 
Sbjct: 10  LLGAFWVTVKLTVFAGVGSLIWGTLLAAMRVGPVPLMRGFGTAYVNIVRNIPLTVIILFT 69

Query: 149 YKSVLSV 155
              +   
Sbjct: 70  SLGLSQT 76


>gi|264678002|ref|YP_003277909.1| amino acid ABC transporter permease PEB1 [Comamonas testosteroni
           CNB-2]
 gi|262208515|gb|ACY32613.1| amino acid ABC transporter, permease protein PEB1 [Comamonas
           testosteroni CNB-2]
          Length = 266

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 2/212 (0%)

Query: 181 LTMDTNAKIFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +  A    +SF+  G++ +L ++ ++       G  L L  +S   +   P++ +I 
Sbjct: 52  PYWEFFAWPTTWSFLAKGLLGTLASSAMAAVIALALGLLLLLGRLSRLRLMRWPSIAVIE 111

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                     +   F  +    +    +  L + +   TAA +AE+ R+G++AVPRGQ +
Sbjct: 112 FLRGTPTLLLIYVCFLVLPSVGIKLSTYWMLTLPIGLSTAAVVAEVYRAGVLAVPRGQTD 171

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LGLT  +    V+ PQA+R I+P L +Q + ++K+++    V + +L+     +I 
Sbjct: 172 AARSLGLTEVQVFFFVVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGELMQNAKVLIA 231

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                + + L+   +Y  ++  I+    RL  
Sbjct: 232 NYHSLVPVYLVVAALYCLVNYAISKASQRLGR 263


>gi|326315080|ref|YP_004232752.1| polar amino acid ABC transporter inner membrane subunit [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323371916|gb|ADX44185.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 241

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 89/208 (42%), Gaps = 11/208 (5%)

Query: 193 SFVLGIVLS---LFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKP 249
           +F LG+  +   L           +  +  PL ++    +  +     +     + F  P
Sbjct: 22  AFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLYVEAIRNTPFLVQLMFVFFGLP 81

Query: 250 VLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRK 309
            L             E+ +  +       A++ EIVR+G+   PRGQ+EAA ALG+    
Sbjct: 82  SL--------GLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQLEAASALGMGRWA 133

Query: 310 ATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILI 369
             R V+L  A++ + P L+SQ + ++  +S+   +   DL      I ++  +A E  ++
Sbjct: 134 CFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANFIQSRNFRAFETYIV 193

Query: 370 WMFIYLSLSIMIALFMNRLNAKIALKEK 397
              +Y +L++++   +  +   + +  +
Sbjct: 194 VTALYFALALLLRQALAWIGQHVIVARR 221


>gi|328887001|emb|CCA60240.1| putative glutamate transport protein [Streptomyces venezuelae ATCC
           10712]
          Length = 221

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 10/231 (4%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F        L    +T+       V S V G +L+       R       +    +Y++
Sbjct: 1   MFDFLQGYDLLGAFWVTVQLTVYSAVGSLVWGTLLAAM-----RVSPVPLMRGFGSVYVN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L  +++                 +       +  F    + L+ YT+AF+ E +
Sbjct: 56  VVRNIPLTVIIVFT-----SLGLFQTLGVDMGADRFTTINFRLAVLGLTAYTSAFVCEAL 110

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  VP GQ+EAA A+GL   +  RL++LPQA RS++ PL +  + L KN+++A A+G
Sbjct: 111 RSGINTVPLGQVEAARAIGLNFPQVLRLIVLPQAFRSVVGPLANVLIALTKNTTVAAAIG 170

Query: 346 FADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            A+   +   +I    Q I I  I+ F ++ L++   LF+  +  K+A+K 
Sbjct: 171 VAEAALLMREMIENEAQLILISTIFAFGFICLTLPTGLFLGWVAKKVAVKR 221



 Score = 44.9 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 31/67 (46%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L  F  T  L     + + + GTL+ A R+S   L+     VYV V RNIP  V+I F 
Sbjct: 10  LLGAFWVTVQLTVYSAVGSLVWGTLLAAMRVSPVPLMRGFGSVYVNVVRNIPLTVIIVFT 69

Query: 149 YKSVLSV 155
              +   
Sbjct: 70  SLGLFQT 76


>gi|320546922|ref|ZP_08041224.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus equinus ATCC 9812]
 gi|320448440|gb|EFW89181.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Streptococcus equinus ATCC 9812]
          Length = 225

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 94/235 (40%), Gaps = 18/235 (7%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
             V    +      L      +     I + S ++ +VL      +    H +  + +  
Sbjct: 1   MQVSGLQVLFQGNNLLRLLKGLLVTINISLVSILISVVLGFLFGFIM-ISHFRVIRFISQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
           +Y+    I        + L + ++F        N  G        ++  I  S +  A +
Sbjct: 60  IYLEFIRIMP-----QLVLLFLVYFGLARTFNLNLSGE-------VAALIVFSMWGTAEM 107

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
            ++VR  L ++P+ Q+E+  ALGL +R+    V++PQ +R ++P   +    ++K +SL 
Sbjct: 108 GDLVRGALTSLPKYQIESGFALGLNNRQLFIYVVMPQILRQLLPQAVNLMTRMIKTTSLI 167

Query: 342 VAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNAK 391
           V +G  ++V VG  II      +      I  +   +Y ++   I+     L  +
Sbjct: 168 VLIGVVEVVKVGQEIIEANRLTVPSTAIWIYGLIFMMYFAVCFPISRLSVYLEKR 222



 Score = 39.5 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 38/78 (48%)

Query: 96  TFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSV 155
           T  ++   ++ + ++G L G   +S  +++ +I ++Y+E  R +P LV++F +Y  +   
Sbjct: 25  TINISLVSILISVVLGFLFGFIMISHFRVIRFISQIYLEFIRIMPQLVLLFLVYFGLART 84

Query: 156 LPIPDHSIVLPFGMFLNN 173
             +     V    +F   
Sbjct: 85  FNLNLSGEVAALIVFSMW 102


>gi|77463946|ref|YP_353450.1| ABC basic amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|221639802|ref|YP_002526064.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
 gi|77388364|gb|ABA79549.1| ABC basic amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|221160583|gb|ACM01563.1| Binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides KD131]
          Length = 275

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 9/180 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF---IGGSTVSPEFMSLYIALSCYTAAF 280
              FL  G P  +   + YQ     P  G   +   +  + ++  +    I L   TAA+
Sbjct: 78  WFIFLFRGSPLFIQFFIAYQALVMLPRAGIDLWGITVETAWLTRAWAGALIVLFFNTAAY 137

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI    L+A+P+G +EAA A GL+  K  R +  P  +R   P  T++ + L   ++L
Sbjct: 138 SAEIFHGALMAIPKGDLEAADAYGLSGWKKFRRIQWPTMLRLAWPAYTNEAIFLFHATTL 197

Query: 341 AVAVGFA------DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               GF       D +       ++T        I  F ++ L++++      +N ++  
Sbjct: 198 VFFSGFPAFQQRGDALYYANYFADKTFNPFVPYPIVAFYFICLTLLVIWLFGLMNRRLNR 257


>gi|307132040|ref|YP_003884056.1| cystine transport system permease [Dickeya dadantii 3937]
 gi|306529569|gb|ADM99499.1| Cystine transport system permease protein [Dickeya dadantii 3937]
          Length = 222

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 92/236 (38%), Gaps = 18/236 (7%)

Query: 161 HSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALP 220
            +      +      L+    T    A + +  F+ GIV+   +        + T K L 
Sbjct: 5   WNNFYHDLIEQLPLVLNGIVGTFKLAAIVSLSGFLWGIVIFFLS-----ISSQPTVKNLT 59

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
            +Y+  F+        LI + + +++  P                F       +    A+
Sbjct: 60  KIYMDFFIGTP-----LILILFVIYYGLPQT--------GIHLSPFTVAVSGFTLNVGAY 106

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            A  + +   ++ + + EAA+  G +  +  RL++LPQ + + +P LT+Q +N +K+S++
Sbjct: 107 NAAYMTTAYNSLSKHETEAAVVQGFSSWQIFRLIILPQVLITSVPALTNQVINNVKDSTI 166

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           A  + + +  S    + +   +     L    +YL     I +    +  K+ + E
Sbjct: 167 AFLIQYTEFFSRIQEVASTNFEFFNAYLFAALVYLVFITFIVILSRVIERKLGIAE 222


>gi|77404678|ref|YP_345252.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
 gi|77390328|gb|ABA81511.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides 2.4.1]
          Length = 243

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 14/184 (7%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           T K   L   S  L+  L  L L+     ++F  P+        G  ++P F S  +A+S
Sbjct: 41  TAKPRLLNRASYALVELLRDLPLMVTVLLVYFMLPM-------TGLGLNP-FWSCCLAIS 92

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +  A  A+I+R+GL +V RGQ E A A G    K   LV LPQAM  I+PP       L
Sbjct: 93  VWGGANGAQILRAGLASVGRGQRETAAAFGFGPVKTLLLVTLPQAMPVIVPPYVGLLTAL 152

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQT------GQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ +SL   VG  +L+  G  +I QT        A  +    + +Y +L  +I+L   R+
Sbjct: 153 VQATSLGAVVGAQELLRTGQVLIEQTTIMQGGSPAYLVYGSILVVYFTLCTLISLVGGRI 212

Query: 389 NAKI 392
               
Sbjct: 213 ERHF 216



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 31/80 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T  ++    +  T    L+  G  +  +L+       VE+ R++P +V 
Sbjct: 7   YRVFLLGGLIETLKMSAVVAMGGTFCAILLTMGITAKPRLLNRASYALVELLRDLPLMVT 66

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +  +Y  +       +    
Sbjct: 67  VLLVYFMLPMTGLGLNPFWS 86


>gi|258545107|ref|ZP_05705341.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
 gi|258519626|gb|EEV88485.1| amino acid ABC superfamily ATP binding cassette transporter,
           permease protein [Cardiobacterium hominis ATCC 15826]
          Length = 215

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 92/224 (41%), Gaps = 18/224 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
            +    R L    +T+  +    + S   G++L +           +  + L   Y+   
Sbjct: 7   WLAYGWRLLQGAGVTLAISLAAMLVSLAGGVLLGVLM-----TLPNRFLRFLCRAYLEFI 61

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +  L+     Y  +F       +++   S          +  S +  A + ++VR 
Sbjct: 62  RFMPVLVLL-----YIFYFGLAAWFGWHWQAYSVC-------ILVFSLWGIAEMGDLVRG 109

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L+++   Q E A+A+GL+  +  R VLLPQ++R ++P + +    ++K ++LA  +G  
Sbjct: 110 ALVSIDPHQRETALAIGLSPAQVFRYVLLPQSVRRVLPGVVNLLTRMIKTTALAALIGVV 169

Query: 348 DLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           D+V V   +I      +  I  I   +Y  L   ++L   RL  
Sbjct: 170 DVVKVAQQVIELHPWASYWIYGILFMLYFLLCYPLSLLAARLER 213



 Score = 43.0 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 40/89 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G   T  ++ + M+ +   G L+G      N+ + ++CR Y+E  R +P LV+
Sbjct: 10  YGWRLLQGAGVTLAISLAAMLVSLAGGVLLGVLMTLPNRFLRFLCRAYLEFIRFMPVLVL 69

Query: 145 IFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           ++  Y  + +       +  +   +F   
Sbjct: 70  LYIFYFGLAAWFGWHWQAYSVCILVFSLW 98


>gi|331014464|gb|EGH94520.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 244

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 95/247 (38%), Gaps = 11/247 (4%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
             +S +        +       +     L     T+       + S + G  L+   T  
Sbjct: 4   WLESAVQWAAGIGLNYAFLLDAYQRGTMLEGAVTTLWLCLLTIIGSLLAGFALAAMLTSG 63

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                           I   +    PTLV +       F    +     +G +     F 
Sbjct: 64  KAWLAMPA-------RIFIEVTRNTPTLVQL----YCAFLVLNMLLTQAVGAANPLTPFA 112

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            + I +S +  AF AE +R+G+ AVP   +EAA +L    R+    V LP A+R  +P L
Sbjct: 113 WVVIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFNSRQLLWNVQLPLAVRFALPSL 172

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  ++L+K +++A A+   D+      I  Q+   +E++++ +  +  LS  +      
Sbjct: 173 VNNLIDLVKMTAVASAIAVNDITYASIMIWTQSDNVLELMILLLSFFAVLSFAVNCAGRA 232

Query: 388 LNAKIAL 394
           L A++ +
Sbjct: 233 LEARLRM 239



 Score = 37.6 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T WL    +I + + G  + A   S    +A   R+++EV RN P LV ++  
Sbjct: 31  MLEGAVTTLWLCLLTIIGSLLAGFALAAMLTSGKAWLAMPARIFIEVTRNTPTLVQLYCA 90

Query: 149 YKSV 152
           +  +
Sbjct: 91  FLVL 94


>gi|296269106|ref|YP_003651738.1| polar amino acid ABC transporter inner membrane subunit
           [Thermobispora bispora DSM 43833]
 gi|296091893|gb|ADG87845.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobispora bispora DSM 43833]
          Length = 223

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 11/222 (4%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    LT+   A   + S V G VL+       R       +    LY++      L  +
Sbjct: 12  LQAFGLTVRLAALSALISLVWGTVLATM-----RVSPLPVLRWAGALYVNVLRNTPLTLV 66

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           ++             +    F         F    + LS YTAAF+ E++RSG+  VP G
Sbjct: 67  IVF-----CGLGLGTVMDVRFSADDLSVNSFWLSTLGLSAYTAAFVCEVIRSGINTVPLG 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA +LGLT  +  RLV+LPQAMR+++ PL +    L+KN+++A A+G A+       
Sbjct: 122 QAEAARSLGLTFPQTLRLVILPQAMRAVVAPLGTLLNALIKNTTVAAAIGVAEAALRMKN 181

Query: 356 IINQTGQA-IEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           + +  G A I + L +   ++ L++ + L    L  ++A+  
Sbjct: 182 LFDAHGDAVIPLFLGFAAGFVILTLPLNLAFGWLAGRLAVVR 223



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
            IL  F  T  LA    + + + GT++   R+S   ++ W   +YV V RN P  +VI F
Sbjct: 10  VILQAFGLTVRLAALSALISLVWGTVLATMRVSPLPVLRWAGALYVNVLRNTPLTLVIVF 69

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFL 171
               + +V+ +   +  L    F 
Sbjct: 70  CGLGLGTVMDVRFSADDLSVNSFW 93


>gi|126462780|ref|YP_001043894.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
 gi|126104444|gb|ABN77122.1| binding-protein-dependent transport systems inner membrane
           component [Rhodobacter sphaeroides ATCC 17029]
          Length = 275

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 9/180 (5%)

Query: 224 ISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF---IGGSTVSPEFMSLYIALSCYTAAF 280
              FL  G P  +   + YQ     P  G   +   +  + ++  +    I L   TAA+
Sbjct: 78  WFIFLFRGSPLFIQFFIAYQALVMLPRAGIDLWGITVETAWLTRAWAGALIVLFFNTAAY 137

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
            AEI    L+A+P+G +EAA A GL+  K  R +  P  +R   P  T++ + L   ++L
Sbjct: 138 SAEIFHGALMAIPKGDLEAADAYGLSGWKKFRRIQWPTMLRLAWPAYTNEAIFLFHATTL 197

Query: 341 AVAVGFA------DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               GF       D +       ++T        I  F ++ L++++      +N ++  
Sbjct: 198 VFFSGFPAFQQRGDALYYANYFADKTFNPFVPYPIVAFYFICLTLLVIWLFGLMNRRLNR 257


>gi|78213328|ref|YP_382107.1| amino acid ABC transporter permease [Synechococcus sp. CC9605]
 gi|78197787|gb|ABB35552.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Synechococcus sp. CC9605]
          Length = 324

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 63/256 (24%), Positives = 102/256 (39%), Gaps = 26/256 (10%)

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
           R +P L ++       L    +            +  R     TLT+         +  L
Sbjct: 82  RWLPLLWIVMAPLGLWLLAGGLGLLP--------VGTRSWGGLTLTLLLTGGSGALALPL 133

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           GI+L+L      R       +     YI       L  ++         F  P L     
Sbjct: 134 GILLAL-----GRRSDLPVLRWSSAAYIELMRAVPLIAVLFFGQLLIPLFLPPGLEINRV 188

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           +        F +           +IAE VR GL A+P  Q EAA  LGL+ R++ +LV+L
Sbjct: 189 LRAVVAFALFAAA----------YIAEDVRGGLQAIPPTQREAAAVLGLSPRQSLQLVVL 238

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ---TGQAIEIILIWMFI 373
           PQA+R  +P LT+Q + LL+N+SL   +G  +L+ +  +++      G+ +E+ L    +
Sbjct: 239 PQALRVALPSLTNQAVGLLQNTSLMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAV 298

Query: 374 YLSLSIMIALFMNRLN 389
           Y      +AL    L 
Sbjct: 299 YWLACTAMALLARHLE 314



 Score = 38.0 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 5/182 (2%)

Query: 106 PATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVL 165
            A  +G L+  GR S   ++ W    Y+E+ R +P + V+FF    +   LP       +
Sbjct: 129 LALPLGILLALGRRSDLPVLRWSSAAYIELMRAVPLIAVLFFGQLLIPLFLPPGLEINRV 188

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFV--LGIVLSLFAT---RLSRHFHEKTGKALP 220
              +       +             +         VL L      +L             
Sbjct: 189 LRAVVAFALFAAAYIAEDVRGGLQAIPPTQREAAAVLGLSPRQSLQLVVLPQALRVALPS 248

Query: 221 LLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAF 280
           L   +  L+     + ++ L   L   + +L    FIG       +++    L+C   A 
Sbjct: 249 LTNQAVGLLQNTSLMAILGLVELLGISRSLLANPAFIGRYLEVYLWLAAVYWLACTAMAL 308

Query: 281 IA 282
           +A
Sbjct: 309 LA 310


>gi|299530121|ref|ZP_07043547.1| amino acid ABC transporter, permease protein PEB1 [Comamonas
           testosteroni S44]
 gi|298721778|gb|EFI62709.1| amino acid ABC transporter, permease protein PEB1 [Comamonas
           testosteroni S44]
          Length = 266

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 100/212 (47%), Gaps = 2/212 (0%)

Query: 181 LTMDTNAKIFVFSFVL-GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +  A    +SF+  G++ +L ++ ++       G  L L  +S   +   P++ +I 
Sbjct: 52  PYWEFFAWPTTWSFLAKGLLGTLASSAMAAVIALALGLVLLLGRLSRLRLMRWPSIAVIE 111

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVS-PEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
                     +   F  +    +    +  L + +   TAA +AE+ R+G++AVPRGQ +
Sbjct: 112 FLRGTPTLLLIYVCFLVLPSVGIKLSTYWMLTLPIGLSTAAVVAEVYRAGVLAVPRGQTD 171

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA +LGLT  +    V+ PQA+R I+P L +Q + ++K+++    V + +L+     +I 
Sbjct: 172 AARSLGLTEVQVFFFVVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGELMQNAKVLIA 231

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
                + + L+   +Y  ++  I+    RL  
Sbjct: 232 NYHSLVPVYLVVAALYCLVNYAISKASQRLGR 263


>gi|121602407|ref|YP_988904.1| amino acid ABC transporter, permease protein [Bartonella
           bacilliformis KC583]
 gi|120614584|gb|ABM45185.1| amino acid ABC transporter, permease protein [Bartonella
           bacilliformis KC583]
          Length = 235

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 5/211 (2%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
              ++   SF +G +LS+  T L      +  K     Y   F     P L  + L Y  
Sbjct: 28  VTLELVSISFFIGFLLSIPIT-LGHLSKNELLKYSAQTYTYFF--RSSPLLAQLFLFYYG 84

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                   +   +     +  +  ++I  +  +AA+   I      +V  GQ EA+ ALG
Sbjct: 85  LGSIRDFWEKIGLWWFFQNAWYCCIFI-FALNSAAYQTIIFIGSFSSVKIGQHEASKALG 143

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAI 364
           L        V+LPQAM   + PL +++  ++K+S++A  +   DL+ +   +  +T    
Sbjct: 144 LHSSTKFFKVILPQAMILALRPLGNEFTLIMKSSAIASLITIYDLMGIAKLLYARTLD-F 202

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           ++ +    IYL +  +I  F+  +  ++   
Sbjct: 203 QVYIWAAIIYLIIVELIHRFIILIERRLTRY 233



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 1/113 (0%)

Query: 83  SSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPL 142
            SY    L G + T  L         ++   +  G LS N+L+ +  + Y   FR+ P L
Sbjct: 16  DSYGLKFLDGLIVTLELVSISFFIGFLLSIPITLGHLSKNELLKYSAQTYTYFFRSSPLL 75

Query: 143 VVIFFLYKSVLSV-LPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
             +F  Y  + S+        +   F          F   +      IF+ SF
Sbjct: 76  AQLFLFYYGLGSIRDFWEKIGLWWFFQNAWYCCIFIFALNSAAYQTIIFIGSF 128


>gi|237745208|ref|ZP_04575689.1| amino acid permease [Fusobacterium sp. 7_1]
 gi|256026689|ref|ZP_05440523.1| amino acid permease protein SP0710 [Fusobacterium sp. D11]
 gi|289764684|ref|ZP_06524062.1| amino acid permease [Fusobacterium sp. D11]
 gi|229432437|gb|EEO42649.1| amino acid permease [Fusobacterium sp. 7_1]
 gi|289716239|gb|EFD80251.1| amino acid permease [Fusobacterium sp. D11]
          Length = 226

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    +FS + GI+  LF             K +  +Y+    I     L
Sbjct: 19  LYGLWVTIKLSLISAIFSIIFGILFGLFME-----IKNPITKIISQIYLQVIRIMPP--L 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ + Y              I G  +S E  S  I  + +  A + ++VR  + ++P+ 
Sbjct: 72  VLLFITYF---------GVTRIYGVHISAE-TSAIIVFTIWGTAEMGDLVRGSIESIPKS 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+E+A+AL L  ++    V++PQ +R +IP   +    ++K +SL V +G  +++ VG  
Sbjct: 122 QIESAMALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQ 181

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+         AI I  +   +Y      +++    L  + +
Sbjct: 182 IIDTNRFQYPNGAIWIYGVIFSLYFLSCWPLSMLAKFLEKRWS 224



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 79/213 (37%), Gaps = 5/213 (2%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
             +   S  +    +L G   T  L+    I + I G L G      N +   I ++Y++
Sbjct: 4   TAIDLLSKGTNFERLLYGLWVTIKLSLISAIFSIIFGILFGLFMEIKNPITKIISQIYLQ 63

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVF 192
           V R +PPLV++F  Y  V  +  +   +      +F          L   +   I     
Sbjct: 64  VIRIMPPLVLLFITYFGVTRIYGVHISAETSAIIVFTIWGTAEMGDLVRGSIESIPKSQI 123

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
              + + L      L     +   + +PL + + T +I     +VLI +   L   + ++
Sbjct: 124 ESAMALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQII 183

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              +F +  G+      +     LSC+  + +A
Sbjct: 184 DTNRFQYPNGAIWIYGVIFSLYFLSCWPLSMLA 216


>gi|220913269|ref|YP_002488578.1| polar amino acid ABC transporter inner membrane protein
           [Arthrobacter chlorophenolicus A6]
 gi|219860147|gb|ACL40489.1| polar amino acid ABC transporter, inner membrane subunit
           [Arthrobacter chlorophenolicus A6]
          Length = 279

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 108/257 (42%), Gaps = 23/257 (8%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
            L++    +  ++                  +   L    L    +A          + L
Sbjct: 26  VLILGLVAWIVMILAQQGIFEGRRWQIFTRADVWRLLGNGLGATLSAAALAAVIAFPLGL 85

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
           +L   R++     +    + L ++    +  +   VL+                      
Sbjct: 86  ALCLLRIADSPIIRIPVRVVLEFLRGMPVVLMMLFVLLGFG------------------- 126

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
             +  F+++   L  Y AA  AEI+R+G+ ++P+GQ EA +A+GLT  ++  L+ LPQA+
Sbjct: 127 --TSPFIAVVTGLVLYNAAVFAEIIRAGISSLPKGQREAGLAIGLTSYRSRMLIELPQAI 184

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA--IEIILIWMFIYLSLS 378
           R ++P L +Q + LLK++SL   V + +L+     + +  G A    +  +   IY++++
Sbjct: 185 RRMMPSLVAQMVVLLKDTSLGYIVAYGELLRAVQVMADFLGNAFLFPVFFVAAAIYIAIN 244

Query: 379 IMIALFMNRLNAKIALK 395
           I+++     +  + + K
Sbjct: 245 ILVSRLAVWIERRGSKK 261


>gi|6560693|gb|AAF16724.1|AF141644_1 putative integral membrane protein [Lactococcus lactis]
          Length = 191

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 53/178 (29%), Positives = 89/178 (50%), Gaps = 25/178 (14%)

Query: 157 PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI--FVFSFVLGIVLSLFATRLSR----- 209
                     FG+  NN       L +     +  F+ + ++GI+  LF+   S+     
Sbjct: 31  IQSSAKENTFFGILQNNWEQIGRGLLVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTI 90

Query: 210 -HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
              +    +++PLL ++ F+ +G+P L+ I   +Q   +                 EF +
Sbjct: 91  ARIYVDLNRSIPLLVLTIFIFYGIPNLLQIITGHQSPLN-----------------EFTA 133

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
             IAL+  ++A+IAEIVRSG+ AVP GQMEA+ +LG+T+  + R V+LPQA++  IP 
Sbjct: 134 GVIALTLNSSAYIAEIVRSGVQAVPSGQMEASRSLGVTYLTSMRKVILPQAIKITIPS 191



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 40/74 (54%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G + T  LA    I A I+G + G   ++ +K++  I R+YV++ R+IP LV+  F++  
Sbjct: 54  GLLVTLELAVLSFILAMIVGIIFGLFSVAPSKILRTIARIYVDLNRSIPLLVLTIFIFYG 113

Query: 152 VLSVLPIPDHSIVL 165
           + ++L I       
Sbjct: 114 IPNLLQIITGHQSP 127


>gi|325523118|gb|EGD01519.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. TJI49]
          Length = 185

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L      + T   +F  S  LG +L+L    + R         L   YI  F   G P L
Sbjct: 12  LMRLLSAVPTTLGLFFASMTLGGMLALVIVAM-RVSPYWLPNRLARAYILVF--RGSPIL 68

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSP----EFMSLYIALSCYTAAFIAEIVRSGLIA 291
           + + L Y        +GQF+F+  S + P     ++   IAL+  TA + AEI+R GL+A
Sbjct: 69  IQLFLVYY------GVGQFDFVRHSLLWPVLREPYLCAVIALALCTAGYTAEIIRGGLMA 122

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           VP GQ+EA  ++GL+     R ++ P A+R  +P  T++ +  +K+++LA  V   ++  
Sbjct: 123 VPVGQIEAGYSIGLSGFALLRRIIAPIALRQCLPAYTTEAILQVKSTALASLVTVWEVTG 182

Query: 352 VGG 354
           V  
Sbjct: 183 VAQ 185



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L     T  L F+ M    ++  ++ A R+S   L   + R Y+ VFR  P L+ +F +
Sbjct: 15  LLSAVPTTLGLFFASMTLGGMLALVIVAMRVSPYWLPNRLARAYILVFRGSPILIQLFLV 74

Query: 149 YKSVLSVLP 157
           Y  V     
Sbjct: 75  YYGVGQFDF 83


>gi|239629434|ref|ZP_04672465.1| L-cystine transport system permease protein tcyL [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239528120|gb|EEQ67121.1| L-cystine transport system permease protein tcyL [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 228

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 7/224 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LI 229
           +    L      +     I  +      +  L    L    H    + L LLY     L+
Sbjct: 1   MGFATLFEVLQHLAPYLGITFWIIGASALFVLVFGSLISLVHFSHSRVLELLYNGFVSLM 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P L+L+ L +   +  P+L Q   I   +   +     +A+    +A+ +E +RS  
Sbjct: 61  RATPVLLLLMLVF---YGMPLLFQLVGID-ISWWAKTSFAILAIGLENSAYFSENLRSAY 116

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+ Q +A  +L  +   A R +L PQ   + +P + +  + ++KNS+    +G  DL
Sbjct: 117 ASLPQSQYDACTSLHFSRIAAIRRILGPQVFAASLPNIGNTLITIVKNSAYVYVIGITDL 176

Query: 350 VSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I   +   Q + + +    IY ++   I  F  +L  +
Sbjct: 177 YEQAQIIAQASFGKQQVVVFIALSLIYWAICAAIQAFFTQLERR 220


>gi|291276580|ref|YP_003516352.1| amino acid ABC transporter integral membrane protein [Helicobacter
           mustelae 12198]
 gi|290963774|emb|CBG39609.1| amino-acid ABC transporter integral membrane protein [Helicobacter
           mustelae 12198]
          Length = 218

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 14/220 (6%)

Query: 175 GLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPT 234
            +      +    KI  F  +  ++L +  + L  ++  +  K +   YI   L    P 
Sbjct: 11  NIPIFAKALVLTLKISFFGILGAVILGMLVSFLL-YYQVRFLKNIAKFYIE--LSRNTPL 67

Query: 235 LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPR 294
           L+ +   Y                       +    I +     +++AE  R GL +V +
Sbjct: 68  LIHLFFLYY-----------GLGQVGIKIDAYHCAVIGVIFLGGSYMAESFRMGLESVAK 116

Query: 295 GQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGG 354
            Q+E+A ALGL+ R+    V+LPQ++   +PPL +  + LLK +S+  A+   D+V V  
Sbjct: 117 SQIESAKALGLSTRQILGYVILPQSLIYALPPLAANVIFLLKETSVVSAIALVDVVFVTK 176

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            +I    +  E +L+ +  YL + + ++LF   L  +   
Sbjct: 177 DLIGTYYKTKETLLLLILTYLIVLLPLSLFFLWLERRYKR 216



 Score = 43.8 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
                V T  ++F G++ A I+G LV        + +  I + Y+E+ RN P L+ +FFL
Sbjct: 15  FAKALVLTLKISFFGILGAVILGMLVSFLLYYQVRFLKNIAKFYIELSRNTPLLIHLFFL 74

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKI 189
           Y  +  V    D       G+          +  M   +  
Sbjct: 75  YYGLGQVGIKIDAYHCAVIGVIFLGGSYMAESFRMGLESVA 115


>gi|39938563|ref|NP_950329.1| ABC-type amino acid transport system, permease component [Onion
           yellows phytoplasma OY-M]
 gi|39721672|dbj|BAD04162.1| ABC-type amino acid transport system, permease [Onion yellows
           phytoplasma OY-M]
          Length = 373

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/101 (29%), Positives = 52/101 (51%)

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V +GQ+EAA +LGL  ++    V  PQA++  +P + +Q++  +K  +  V +   D+  
Sbjct: 263 VDKGQVEAAQSLGLNKKQTFYYVTFPQALKKSVPLVVAQFVTNIKACTFFVLIALIDMSF 322

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           V    +N TG  +   +I  F+YL L   I +    L  K+
Sbjct: 323 VTNDAMNVTGDLVAPFVILSFVYLVLIQFINMLSKYLEKKL 363


>gi|193084290|gb|ACF09949.1| glutamine transport ATP-binding protein glnQ [uncultured marine
           group II euryarchaeote KM3-130-D10]
          Length = 552

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 86/233 (36%), Gaps = 19/233 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  +         + +       V  F +G++L+         F   +   + L+     
Sbjct: 328 GDGIEASQWGGLFVNLIVATAGCVLGFGIGVILAFGRQSDQPFFSIPSVALIELVRSGPL 387

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           + +         L + +     ++  F                +    +   +IAE++R 
Sbjct: 388 ICW---------LWFAVFLMPDLMDPFYDAEDIIRM------LLMFGVFGGCYIAEVLRG 432

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL +V  GQ EAAIALGL+  +    V LP A+R+ +P + S ++ L K+++L   +   
Sbjct: 433 GLQSVDSGQKEAAIALGLSPFQTKMTVELPNAVRTTLPSIVSVFIGLWKDTTLLFIINIL 492

Query: 348 DLVSVGGTIINQT----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           D   +   +        G  +E + +   ++   +  ++     +   + L  
Sbjct: 493 DFFKLAKDLPATDLRFLGNFLEPLYVTAIVFWVFAFYLSRVSMGIEKNLGLVR 545



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 54/154 (35%), Gaps = 4/154 (2%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
             G      +A +G +    IG ++  GR S     +      +E+ R+ P +  ++F  
Sbjct: 336 WGGLFVNLIVATAGCVLGFGIGVILAFGRQSDQPFFSIPSVALIELVRSGPLICWLWFAV 395

Query: 150 KSVLSVL-PIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS---FVLGIVLSLFAT 205
             +  ++ P  D   ++   +     G  +    +    +          + + LS F T
Sbjct: 396 FLMPDLMDPFYDAEDIIRMLLMFGVFGGCYIAEVLRGGLQSVDSGQKEAAIALGLSPFQT 455

Query: 206 RLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
           +++          LP +      ++   TL+ I 
Sbjct: 456 KMTVELPNAVRTTLPSIVSVFIGLWKDTTLLFII 489


>gi|207722317|ref|YP_002252753.1| hypothetical protein RSMK04914 [Ralstonia solanacearum MolK2]
 gi|206587494|emb|CAQ18076.1| hypothetical protein RSMK04914 [Ralstonia solanacearum MolK2]
          Length = 143

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 67/125 (53%)

Query: 267 MSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPP 326
                 ++ Y  AF +E +R+G+ AVP GQ+ AA++LG T   A   ++LPQA+R    P
Sbjct: 1   WRRIFGIALYAGAFCSEELRAGIRAVPHGQLNAALSLGFTPHAAFVRIVLPQALRVAALP 60

Query: 327 LTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMN 386
           L  Q  N LKN+SLA+ +G A+L      +   +  A +   +   +Y ++++++   + 
Sbjct: 61  LLGQCANTLKNTSLAMGIGLAELSYSARQVETDSLLAFQAFAVATLLYAAVTLLLQWAVP 120

Query: 387 RLNAK 391
            L  +
Sbjct: 121 VLLRR 125


>gi|116617273|ref|YP_817644.1| ABC-type amino acid transport system, permease component
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
 gi|116096120|gb|ABJ61271.1| amino acid ABC transporter membrane protein 2, PAAT family
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 226

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 88/208 (42%), Gaps = 21/208 (10%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
             +LG++L    +              P+      +   +PT+ L+ L Y +        
Sbjct: 36  GTILGVILGSLWSAAGTLIK-------PIFKAYLEIFRVVPTIPLLFLFYYIF------- 81

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
                  +          +  S + AA +++IVR  + ++ + Q E A ++GLT  +  R
Sbjct: 82  ---PRNLNINLSAMQVSILVFSLWFAAELSDIVRGAIQSISKSQRENAYSIGLTTLQTYR 138

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIIL 368
            VL+PQ++ +I+P   +    ++K +S+ + +   D+++VG  II    Q     + I  
Sbjct: 139 YVLIPQSVPNILPAFINLSSRIIKTTSILLLISVTDVITVGQQIIEANAQDTAVPLLIYG 198

Query: 369 IWMFIYLSLSIMIALFMNRLNAKIALKE 396
               +Y  ++ +++ F  RL  K    E
Sbjct: 199 FIALLYFLINYLLSHFSRRLERKYRKYE 226


>gi|77405107|ref|ZP_00782206.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae H36B]
 gi|77176250|gb|EAO79020.1| amino acid ABC transporter, amino acid-binding protein/permease
           protein [Streptococcus agalactiae H36B]
          Length = 123

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 49/94 (52%)

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           AA ALG TH +  R ++LPQ +R+I+P   ++++  +K++S+   +   +L   G T+  
Sbjct: 16  AATALGFTHGQTMRKIVLPQVVRNILPATGNEFVINIKDTSVLNVISVVELYFSGNTVAT 75

Query: 359 QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           QT Q  +   I   IY  L+  +   +  +  + 
Sbjct: 76  QTYQYFQTFTIIAIIYFILTFTVTRTLRYIEKRF 109


>gi|301065539|ref|YP_003787562.1| putative amino acid ABC transporter permease [Lactobacillus casei
           str. Zhang]
 gi|300437946|gb|ADK17712.1| putative amino acid ABC transporter, permease protein
           [Lactobacillus casei str. Zhang]
          Length = 228

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 89/224 (39%), Gaps = 7/224 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LI 229
           +    L      +     I  +      +  L    L    H    + L LLY     L+
Sbjct: 1   MGFATLFEVLQHLAPYLGITFWIIGASALFVLVFGSLISLVHFSHSRVLELLYNGFVSLM 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P L+L+ L +   +  P+L Q   I  S    +     +A+    +A+ +E +RS  
Sbjct: 61  RATPVLLLLMLVF---YGMPLLFQLVGIDIS-WWAKTSFAILAIGLENSAYFSENLRSAY 116

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+ Q +A  +L  +   A R +L PQ   + +P + +  + ++KNS+    +G  DL
Sbjct: 117 ASLPQSQYDACTSLHFSRIAAIRRILGPQVFAAALPNIGNTLITIVKNSAYVYVIGITDL 176

Query: 350 VSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
                 I   +   Q + + +    IY ++   I  F  +L  +
Sbjct: 177 YEQAQIIAQASFGKQQVVVFIALSLIYWAICAAIQAFFTQLERR 220


>gi|260433178|ref|ZP_05787149.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417006|gb|EEX10265.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 268

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 13/210 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V +   G  L+  A  L +    K  +     +I  F+  G P  +     Y L      
Sbjct: 48  VMALATGFFLAT-AVALGKASSRKWLRKPSEWFI--FIFRGSPLFIQFFFAYFLFLSLKK 104

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                       +  ++   I L   TAA+  EI    L ++P+G +EAA A G++    
Sbjct: 105 TYPMF----DAFTSAWLGALIVLFLNTAAYSGEIFYGALRSIPKGDIEAADAYGMSGWSR 160

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAI 364
            R ++ P  +R   P  T++ + L   ++L     F       D +       ++T    
Sbjct: 161 FRRIVWPTMLRLAWPAYTNEAIFLFHATTLVFFSAFPAWQQRGDALYYASYFADKTFNPF 220

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
               I  F ++ L+++I      +N ++  
Sbjct: 221 VPYPILAFYFILLTLVIVGVFGLINKRLNR 250


>gi|149189499|ref|ZP_01867783.1| probable glutamine transport system permease protein [Vibrio
           shilonii AK1]
 gi|148836656|gb|EDL53609.1| probable glutamine transport system permease protein [Vibrio
           shilonii AK1]
          Length = 223

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 12/181 (6%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           RH+       + +       +   P LV + L Y   F  P       I  S      ++
Sbjct: 43  RHYRLPLLNQISVFVSEF--LKNSPVLVQLFLIY---FGLP-------IFLSMDMSAELA 90

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             I L+  TAAF++ I+ + + AV +GQ+EAA + G++     + ++ PQA+   I PL 
Sbjct: 91  ATITLTGNTAAFVSVIIVTAMAAVDKGQIEAARSFGISEMVILKKIITPQALLVAIAPLV 150

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              +N L+ +SL   +G  D+  VG  +  +T Q   +  +    Y ++S+ I+    +L
Sbjct: 151 GLAVNQLQVTSLVSVIGVMDITKVGAILNQRTWQPFIVWPVIGLTYFAMSMAISKLGRKL 210

Query: 389 N 389
            
Sbjct: 211 E 211


>gi|149925442|ref|ZP_01913706.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Limnobacter sp. MED105]
 gi|149825559|gb|EDM84767.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Limnobacter sp. MED105]
          Length = 332

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 9/255 (3%)

Query: 134 EVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFS 193
           +    I  L+    L+ +   +        +    +  +   L      + T        
Sbjct: 77  QWRAGIVLLLWSVLLFATAARLFKSKTAFSLWALLLPASAVLLHGGVAALPTVPTNLWGG 136

Query: 194 FVLGIVLSL--FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
             L ++LS   FA  L        G+      +  F I  +  L  + L   L     VL
Sbjct: 137 LPLTLILSTVGFALALPLAVLLALGRQSAFAPLRRFCITYIELLRALPLVTVLFLAAFVL 196

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
             +    G  +   F  +   ++ ++AA++AE++R GL AVP GQ +AA ALGL   +  
Sbjct: 197 PLWLPGEGLDL---FTRVLFTIALFSAAYLAEVLRGGLQAVPAGQGQAAKALGLNRVQRN 253

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEII 367
             V+LPQA+R+ +P L + ++ L K  SL   V   +L       +    Q     +E  
Sbjct: 254 VHVVLPQAIRACLPSLINSFVTLFKECSLVTIVALFELTGALSLALAGDVQWRSFYLEGY 313

Query: 368 LIWMFIYLSLSIMIA 382
           L    +Y +    ++
Sbjct: 314 LFIGLVYWAYCFGLS 328


>gi|167036208|ref|YP_001671439.1| polar amino acid ABC transporter inner membrane subunit
           [Pseudomonas putida GB-1]
 gi|166862696|gb|ABZ01104.1| polar amino acid ABC transporter, inner membrane subunit
           [Pseudomonas putida GB-1]
          Length = 221

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 97/210 (46%), Gaps = 5/210 (2%)

Query: 188 KIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFD 247
             F+ S +   + ++  T         T   + L+  +  ++       L+    +L  +
Sbjct: 5   IAFILSTLPAFLKAVGVTLQVGMIAIATSLLVALVNATLLVLRTPYLWRLVKAYVELARN 64

Query: 248 KPVLGQFNFIGGSTV-----SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            P+L Q  F+  +          F +  I ++    A++ E++R+G+ AVPR Q+E+  +
Sbjct: 65  TPLLIQLFFVYFALPSLGLKISGFSAAIITMTFMGGAYLTEVLRAGIEAVPRAQLESGRS 124

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           +GL+  +  R V+LPQA    +P L + ++ LLK +++  AV   +++      I    +
Sbjct: 125 IGLSEGQLLRHVVLPQAGILSLPALFANFIFLLKETTVVSAVAVPEILYTTKNYIALYYK 184

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             E++ +   + + L + ++L +  +  ++
Sbjct: 185 TYEMLTVLTLLCVLLFLPLSLLLRYVERRL 214



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 31/68 (45%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
           A L     T  +    +  + ++  +     +     +  + + YVE+ RN P L+ +FF
Sbjct: 14  AFLKAVGVTLQVGMIAIATSLLVALVNATLLVLRTPYLWRLVKAYVELARNTPLLIQLFF 73

Query: 148 LYKSVLSV 155
           +Y ++ S+
Sbjct: 74  VYFALPSL 81


>gi|76665061|emb|CAJ17976.1| amino acid ABC transporter permease component [Candidatus
           Phytoplasma solani]
          Length = 251

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 3/189 (1%)

Query: 210 HFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSL 269
            F   T K    L    F  F    +++ +L +          QF           F   
Sbjct: 35  KFLRFTKKTFAYLIDGYFSFFQAVPVLIQSLLFYFSISIIAKSQFKSDFFIITEGIFAVA 94

Query: 270 YIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTS 329
            I +   T A +A I+ + +  + +GQ++AA ALG+T ++  + ++ PQ+++   P +  
Sbjct: 95  LIVIMLNTGANLAIIMLNNIKFLDQGQIQAAHALGMTQQQVFKYIIFPQSIKRTYPSIYH 154

Query: 330 QYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIM---IALFMN 386
           Q++  +K ++L  ++G   LV      I   G  I   L    IYL L  +   I   + 
Sbjct: 155 QFIINIKETALFSSIGLVGLVWQAQRHIATNGDTITPYLTISIIYLLLVFVANTINKLIT 214

Query: 387 RLNAKIALK 395
           +   K A+ 
Sbjct: 215 KYGKKYAIS 223


>gi|194016194|ref|ZP_03054808.1| L-cystine transport system permease protein TcyB [Bacillus pumilus
           ATCC 7061]
 gi|194011667|gb|EDW21235.1| L-cystine transport system permease protein TcyB [Bacillus pumilus
           ATCC 7061]
          Length = 236

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 7/237 (2%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F +    +        + T   +     + G V   F   L R +          L+ 
Sbjct: 1   MDFDVAFMLQAFLAALHYLPTTLLLGFLPLIFGSVFG-FGIALIRFYQVPVLSQ---LFK 56

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEF---MSLYIALSCYTAAFI 281
               IF    +VLI L   L F   +      +       +         AL+ Y  + +
Sbjct: 57  WFVAIFKAIPVVLILLVSYLLFSDSLDHLAASLSLQIRFSDLDRRWIAIFALTLYAVSGL 116

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +EI RS L ++P+GQ +AA+++G T ++  R V++PQ     +P L +  ++L+K SSL 
Sbjct: 117 SEIFRSSLASIPKGQFDAALSVGFTSKQVLRRVIIPQVFPISLPLLNNMLISLIKASSLV 176

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
             V   D+++      N   + +E  +    IY +L   I              +++
Sbjct: 177 SMVSVVDILNGALIKANVNYRYLEAYIAVALIYWALCASIEAITAAYEKYGHKNKRR 233


>gi|212712949|ref|ZP_03321077.1| hypothetical protein PROVALCAL_04047 [Providencia alcalifaciens DSM
           30120]
 gi|212684427|gb|EEB43955.1| hypothetical protein PROVALCAL_04047 [Providencia alcalifaciens DSM
           30120]
          Length = 121

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 72/114 (63%)

Query: 281 IAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSL 340
           + E VR+ + ++PRGQ  AA+A+GLT  +  R VLLP A R I+PP+TS+ LNL+KNS++
Sbjct: 1   MTEQVRAAIQSLPRGQRNAALAMGLTLPQTYRYVLLPNAYRVILPPMTSEMLNLVKNSAI 60

Query: 341 AVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           A  +G  D+ +  G +++ +  A E        Y+ ++++I L M+ L  K+ L
Sbjct: 61  ASTIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVGINLIIMLLMSLLERKVRL 114


>gi|221218202|ref|YP_002524229.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides KD131]
 gi|221163229|gb|ACM04195.1| ABC amino acid transporter, inner membrane subunit [Rhodobacter
           sphaeroides KD131]
          Length = 243

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 14/184 (7%)

Query: 215 TGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALS 274
           T K   +   S  L+  L  L L+     ++F  P+        G  ++P F S  +A+S
Sbjct: 41  TAKPRLVNRASYALVELLRDLPLMVTVLLVYFMLPM-------TGLGLNP-FWSCCLAIS 92

Query: 275 CYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNL 334
            +  A  A+I+R+GL +V RGQ E A A G    K   LV LPQAM  I+PP       L
Sbjct: 93  VWGGANGAQILRAGLASVGRGQRETAAAFGFGPVKTLLLVTLPQAMPVIVPPYVGLLTAL 152

Query: 335 LKNSSLAVAVGFADLVSVGGTIINQT------GQAIEIILIWMFIYLSLSIMIALFMNRL 388
           ++ +SL   VG  +L+  G  +I QT        A  +    + +Y +L  +I+L   R+
Sbjct: 153 VQATSLGAVVGAQELLRTGQVLIEQTTIMQGGSPAYLVYGSILVVYFTLCTLISLVGGRI 212

Query: 389 NAKI 392
               
Sbjct: 213 ERHF 216



 Score = 39.5 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +L G + T  ++    +  T    L+  G  +  +LV       VE+ R++P +V 
Sbjct: 7   YRVFLLGGLIETLKMSAVVALGGTFCAILLTMGITAKPRLVNRASYALVELLRDLPLMVT 66

Query: 145 IFFLYKSVLSVLPIPDHSIV 164
           +  +Y  +       +    
Sbjct: 67  VLLVYFMLPMTGLGLNPFWS 86


>gi|221369462|ref|YP_002520558.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
 gi|221162514|gb|ACM03485.1| Polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides KD131]
          Length = 226

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 14/232 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F     N  +    L                ++    +  L+       G  +   +I 
Sbjct: 6   RFLATFFNARIFARYLPDMLAGVWTTIWLAGAVIALGLSLGLALACLRAYGWRIANFFII 65

Query: 226 TFLIFGLPT--LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            F   G     LVLI + Y           F   G     P  + L + L    AAF  E
Sbjct: 66  CFADMGRALPPLVLILIMY-----------FGLPGLGLRMPGPLVLILVLGTVLAAFAEE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I  +GL +VP+GQ EA  A GL   +    + LPQA R  +PPL ++ L + K ++L   
Sbjct: 115 IFWAGLTSVPKGQWEAGRATGLGFTQTLVRIALPQAARLALPPLVNRVLAISKMTALGSV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +G ++++SV  T  + TG A   + +    Y+ + + + +    L  + A K
Sbjct: 175 IGVSEILSVASTAQSFTGSAAP-LTMGAIAYVIVFLPLVVLTRLLERRFAWK 225


>gi|118592147|ref|ZP_01549540.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
 gi|118435119|gb|EAV41767.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
          Length = 222

 Score = 99.6 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 14/224 (6%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
                +      +     + V + +L +++ L    L R    K        Y+    I 
Sbjct: 8   YIWDAVPDLLQGLKMTLLVSVLAILLSLLMGLIGCAL-RMSPLKIVGYAVAAYVEF--IR 64

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
           G P LV +   +   +  P LG    +        F S  +ALS + + F  E  R+GL 
Sbjct: 65  GTPYLVQVFFVF---YGLPNLGLTLSV--------FWSGVVALSIWASVFHIESFRAGLS 113

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           +V +     + +LGL   +   LV+LP A RS +P   +  ++ +KNS+   A+G  +L 
Sbjct: 114 SVSKDIHNTSASLGLRRWQHALLVVLPIAARSALPSTLNTVVSTIKNSAYLQAIGLVELT 173

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
            V    I    +A E+ L    IYL + + ++   +RL  ++  
Sbjct: 174 FVAVDRIAYEFRATEMFLSICVIYLVIVLAVSGLGHRLERRLNR 217



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 39/94 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   T  ++   ++ + ++G +  A R+S  K+V +    YVE  R  P LV +FF+
Sbjct: 16  LLQGLKMTLLVSVLAILLSLLMGLIGCALRMSPLKIVGYAVAAYVEFIRGTPYLVQVFFV 75

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
           +  + ++             + +        +  
Sbjct: 76  FYGLPNLGLTLSVFWSGVVALSIWASVFHIESFR 109


>gi|254501614|ref|ZP_05113765.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
 gi|222437685|gb|EEE44364.1| ABC transporter, permease protein, putative [Labrenzia alexandrii
           DFL-11]
          Length = 271

 Score = 99.6 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 91/262 (34%), Gaps = 5/262 (1%)

Query: 131 VYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIF 190
            YV             FL      ++    + +   +      R L     T+       
Sbjct: 10  AYVPPPPRRLLEPHRIFLIAFFGVIVFCAIYFMRWDWLPKYQTRLLYGIGETLFLLFSTA 69

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
              F+L + + L      +        AL   + +      L   + +            
Sbjct: 70  AVGFLLALPIGLV-----QVTGPWPLAALARGFCTLIRGTPLLLQLWLLYYGLGSVFAQY 124

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
                 +    +   +   + AL    AA+  E++R     VPRG++EAA A G+     
Sbjct: 125 PEIRQSMFWPYLRDAWPYGFTALMLSFAAYEGEVMRGAFAGVPRGELEAARAFGMNRFTM 184

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIW 370
            R + LP+A    +P L+ + +  LK++ L   +   D  +V   +   T    E +L+ 
Sbjct: 185 FRRIWLPRAFYRALPTLSGETVLQLKSTPLVATITVVDAYAVITRVRQDTFLVYEPLLLL 244

Query: 371 MFIYLSLSIMIALFMNRLNAKI 392
             IY+ L+ ++ L    L ++I
Sbjct: 245 ALIYMCLTGILVLLFRYLESRI 266


>gi|254449481|ref|ZP_05062918.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
 gi|198263887|gb|EDY88157.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Octadecabacter antarcticus 238]
          Length = 269

 Score = 99.6 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 13/216 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M  N    V + + G  L+  A  L +       +     +I  F    L      A  +
Sbjct: 40  MIWNVYFGVVALLSGFFLAT-AVALGKAARNPVIRKASEWFIFLFRGSPLFIQFFFAYFF 98

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            L        Q++F    T    ++   I L   T+A+  EI    L ++P+G  EAA A
Sbjct: 99  FLSL----KSQYDFFDPFT--AAWLGALIVLFLNTSAYTGEIFYGALQSIPKGDTEAADA 152

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTI 356
            GL+     R V+ P  +R   P  T++ + L  +++L    GF       D +      
Sbjct: 153 YGLSGWSRFRHVIWPTMLRLAWPAYTNEAIFLFHSTTLVFFSGFPAWGQKGDALYYASFF 212

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++T        I  F ++ L+++I   M R+  ++
Sbjct: 213 ADKTFNPFVPYPILAFYFILLTLVIIGIMGRIGRRL 248


>gi|126739644|ref|ZP_01755336.1| ABC transporter, membrane spanning protein (amino acid)
           [Roseobacter sp. SK209-2-6]
 gi|126719290|gb|EBA16000.1| ABC transporter, membrane spanning protein (amino acid)
           [Roseobacter sp. SK209-2-6]
          Length = 221

 Score = 99.6 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 14/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
             + F        L F          I   +  +G    +    L    +E    A   L
Sbjct: 3   QPISFFSGFQPSDLLFLAEAAWRTLLISGLAISIGTFFGIIFGWL---LYEGRIWASLTL 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                +   +P ++ + L Y           F  I G  + P F S  + L+ YTAA +A
Sbjct: 60  APVLDIFRSVPLIIQLVLFYN----------FAPILGLNLDP-FASGVVILAIYTAALVA 108

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
            + R G+ AV +    AA +LG+++ +  R V LP   R++ P      L ++K+S+L  
Sbjct: 109 NVARGGIEAVGQPMRRAARSLGMSYWQDLRYVALPIGGRAVFPAWVGVALGVMKDSALVS 168

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            +G+ +L+     +I +T +   I+ I    Y +LS  I+ +  RL  + A
Sbjct: 169 VLGYVELLKASQILITRTQEPFLILSIAGAFYFALSYPISRYAARLEQRWA 219


>gi|193077067|gb|ABO11825.2| ArtM protein [Acinetobacter baumannii ATCC 17978]
          Length = 206

 Score = 99.6 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 86/220 (39%), Gaps = 22/220 (10%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           +     T         FS + G V  +              KAL  LY+    I     +
Sbjct: 1   MWGLWATAKIAFISVFFSAIFGTVFGVIM-----TSKNIVVKALCRLYLEAIRIIP---I 52

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           +++   +   F      QF+               +    +  A + ++VR+ + ++ + 
Sbjct: 53  LVLLFVFYFGFATWFNWQFS---------AMWVCVVVFVLWGTAEMGDLVRAAITSIDQH 103

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q ++A ALGLTH +A   V+ PQ+++ + P   + +  ++K SSLAV +G  +++ VG  
Sbjct: 104 QRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLIGVVEVIKVGQQ 163

Query: 356 IINQTGQAIE-----IILIWMFIYLSLSIMIALFMNRLNA 390
           II  +   +      I      +Y  +   ++     L  
Sbjct: 164 IIENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEK 203



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 39/82 (47%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G   T  +AF  +  + I GT+ G    S N +V  +CR+Y+E  R IP LV++F  Y  
Sbjct: 3   GLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLEAIRIIPILVLLFVFYFG 62

Query: 152 VLSVLPIPDHSIVLPFGMFLNN 173
             +       ++ +   +F+  
Sbjct: 63  FATWFNWQFSAMWVCVVVFVLW 84


>gi|54025808|ref|YP_120050.1| putative glutamate transporter [Nocardia farcinica IFM 10152]
 gi|54017316|dbj|BAD58686.1| putative glutamate transporter [Nocardia farcinica IFM 10152]
          Length = 223

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 10/226 (4%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIF 230
            +++ L    +T+       V + +LG +++       R       + L   Y++ F   
Sbjct: 8   YDSQILQAFWVTIKLTLFSAVGALILGTIVAAM-----RVSPIPVARWLGTAYVTIFRNT 62

Query: 231 GLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
            L  +++                +   G S     +    + LS YTAAF+ E +RSG+ 
Sbjct: 63  PLTLIIVF-----CSLGLYSALGWKLAGDSIADNNYRWAIVGLSVYTAAFVCESLRSGIN 117

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
            VP GQ EA  +LG +  +  RLV+LPQA RS+I PL S  + L KNS++A A+G A+  
Sbjct: 118 TVPLGQSEAGRSLGFSFSQNLRLVVLPQAFRSVIAPLGSVLIALTKNSTIAAAIGVAEAA 177

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            +   +I      + I  I+ F ++ +++   L    L  +  +  
Sbjct: 178 HLMAEMIETEAALLAIGAIFAFGFVLITLPTGLLFGWLAKRYEVAR 223



 Score = 51.5 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 40/94 (42%)

Query: 79  YTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRN 138
           +   S Y + IL  F  T  L     + A I+GT+V A R+S   +  W+   YV +FRN
Sbjct: 2   FDLISEYDSQILQAFWVTIKLTLFSAVGALILGTIVAAMRVSPIPVARWLGTAYVTIFRN 61

Query: 139 IPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
            P  ++I F    + S L        +    +  
Sbjct: 62  TPLTLIIVFCSLGLYSALGWKLAGDSIADNNYRW 95


>gi|305433023|ref|ZP_07402179.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
 gi|304443724|gb|EFM36381.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Campylobacter coli JV20]
          Length = 218

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 88/201 (43%), Gaps = 21/201 (10%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+ L +  +  +R+ +           +  F +  +  + L+   + ++F        N 
Sbjct: 35  GLFLGILMSLKNRYIYI----------LCRFALEFVRVMPLLVWLFMVYFGLSRWLGINL 84

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
                      S  I  S + +  + ++VR+ L ++P+ Q E+A +LGL   ++   +++
Sbjct: 85  -------SSVSSAIIVFSIWGSFEMMDLVRTSLKSIPKHQYESAASLGLNKAQSYFYIII 137

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ----AIEIILIWMF 372
           PQAMR + P   +    ++K+++ A  +G  +LV VG  II    +       I  +  F
Sbjct: 138 PQAMRRLTPMSMNLLTRMIKSTTFAYLIGAVELVKVGQQIIEFNNKNDLAPFIIYGLIFF 197

Query: 373 IYLSLSIMIALFMNRLNAKIA 393
           I+  +   + L+  +L  K +
Sbjct: 198 IFFLICYPVTLYSKKLEKKWS 218


>gi|126641443|ref|YP_001084427.1| ArtM protein [Acinetobacter baumannii ATCC 17978]
          Length = 178

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
                 KAL  LY+    I     ++++   +   F      QF+               
Sbjct: 3   SKNIVVKALCRLYLEAIRIIP---ILVLLFVFYFGFATWFNWQFS---------AMWVCV 50

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +    +  A + ++VR+ + ++ + Q ++A ALGLTH +A   V+ PQ+++ + P   + 
Sbjct: 51  VVFVLWGTAEMGDLVRAAITSIDQHQRDSAYALGLTHVQALIYVIFPQSLKRVTPGAINL 110

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIALFM 385
           +  ++K SSLAV +G  +++ VG  II  +   +      I      +Y  +   ++   
Sbjct: 111 FTRMVKTSSLAVLIGVVEVIKVGQQIIENSLLTVPSASLWIYGFIFILYFLICYPLSRLA 170

Query: 386 NRLNA 390
             L  
Sbjct: 171 AHLEK 175


>gi|262068034|ref|ZP_06027646.1| amino acid ABC transporter, permease protein [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378256|gb|EFE85774.1| amino acid ABC transporter, permease protein [Fusobacterium
           periodonticum ATCC 33693]
          Length = 226

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 22/223 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + GI+  LF          K      +  +   +I  +P L
Sbjct: 19  LYGLWITIKLSLISAILSVIFGILFGLFMV-------IKNPLTRIVSQVYLQIIRIMPPL 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ + Y              + G  +SPE  S  I  + +  A + ++VR  + ++P+ 
Sbjct: 72  VLLFIAYF---------GVTRMYGLHISPE-ASAIIVFTIWGTAEMGDLVRGAIESIPKI 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+E+A AL L  ++    V++PQ +R +IP   +    ++K +SL V +G  +++ VG  
Sbjct: 122 QIESATALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQ 181

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           II+         AI I  +   +Y      +++    L  + +
Sbjct: 182 IIDTNRFQYPNGAIWIYGVIFLLYFLSCWPLSMLAKFLEKRWS 224



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 80/213 (37%), Gaps = 5/213 (2%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++   S  +    +L G   T  L+    I + I G L G   +  N L   + +VY++
Sbjct: 4   TVIDLLSKGTNLERLLYGLWITIKLSLISAILSVIFGILFGLFMVIKNPLTRIVSQVYLQ 63

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           + R +PPLV++F  Y  V  +  +          +F          L       I     
Sbjct: 64  IIRIMPPLVLLFIAYFGVTRMYGLHISPEASAIIVFTIWGTAEMGDLVRGAIESIPKIQI 123

Query: 195 VLGIVLSL--FATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
                L+L      L     +   + +PL + + T +I     +VLI +   L   + ++
Sbjct: 124 ESATALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQII 183

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              +F +  G+      + L   LSC+  + +A
Sbjct: 184 DTNRFQYPNGAIWIYGVIFLLYFLSCWPLSMLA 216


>gi|294782143|ref|ZP_06747469.1| amino acid ABC transporter, permease protein [Fusobacterium sp.
           1_1_41FAA]
 gi|294480784|gb|EFG28559.1| amino acid ABC transporter, permease protein [Fusobacterium sp.
           1_1_41FAA]
          Length = 226

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 22/224 (9%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L    +T+  +    + S + GI+  LF             + +  +Y+    I     L
Sbjct: 19  LYGLWITIKLSLISAILSVIFGILFGLFM-----VIKNPLIRIISQVYLQIIRIMPP--L 71

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
           VL+ + Y              + G  +SPE  S  I  + +  A + ++VR  + ++P+ 
Sbjct: 72  VLLFIAYF---------GVTRMYGLHISPE-ASAIIVFTIWGTAEMGDLVRGAIESIPKI 121

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q+E+A AL L  ++    V++PQ +R +IP   +    ++K +SL V +G  +++ VG  
Sbjct: 122 QIESATALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQ 181

Query: 356 IINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           II+         AI I  +   +Y      +++    L  + + 
Sbjct: 182 IIDTNRFQYPNGAIWIYGVIFLLYFLSCWPLSMLAKFLEKRWSR 225



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 81/213 (38%), Gaps = 5/213 (2%)

Query: 75  GIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVE 134
            ++   S  +    +L G   T  L+    I + I G L G   +  N L+  I +VY++
Sbjct: 4   TVIDLLSKGTNLERLLYGLWITIKLSLISAILSVIFGILFGLFMVIKNPLIRIISQVYLQ 63

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
           + R +PPLV++F  Y  V  +  +          +F          L       I     
Sbjct: 64  IIRIMPPLVLLFIAYFGVTRMYGLHISPEASAIIVFTIWGTAEMGDLVRGAIESIPKIQI 123

Query: 195 VLGIVLSL--FATRLSRHFHEKTGKALPL-LYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
                L+L      L     +   + +PL + + T +I     +VLI +   L   + ++
Sbjct: 124 ESATALALDKKQIYLYVIIPQIIRRLIPLSVNLITRMIKTTSLVVLIGIVEVLKVGQQII 183

Query: 252 --GQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
              +F +  G+      + L   LSC+  + +A
Sbjct: 184 DTNRFQYPNGAIWIYGVIFLLYFLSCWPLSMLA 216


>gi|294083877|ref|YP_003550634.1| polar amino acid ABC transporter inner membrane subunit [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663449|gb|ADE38550.1| polar amino acid ABC transporter, inner membrane subunit
           [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 225

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 18/212 (8%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
             T+  +        +LG++        +R+          +L +   +   +P ++ + 
Sbjct: 28  MRTLMISVIAISSGSLLGVIFGWILAEFNRYL-------TAILNLILDVFRSVPLIIQLI 80

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           L Y           F  I G  +SP FM+  I L  YTAA +A++ RSG+ A P     A
Sbjct: 81  LFYN----------FFPIIGLPLSP-FMAGTIVLIVYTAALVAQVARSGVEATPLPMRRA 129

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           A +LG+T+ +  R V+ P  +R+++P  T   L +LK+S+L   +G+ +L+     ++ +
Sbjct: 130 ARSLGMTYFQDIRYVVFPIGLRAVLPAWTGVALGVLKDSALVSVLGYVELLRASQILVTR 189

Query: 360 TGQAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           T +   I+ +    Y  LS  IA   +RL  +
Sbjct: 190 TQEPFIILAVVGGFYFMLSYPIARITDRLEKR 221


>gi|257484550|ref|ZP_05638591.1| amino acid ABC transporter, permease protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 127

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 53/107 (49%)

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           V  GQ EAA ALGL   +    ++LPQA+RSI+P   ++ + L+K +S+   +   +L  
Sbjct: 1   VDAGQHEAAAALGLPASRRVFRIILPQALRSILPSGFNEIIGLVKGTSIVYVLALPELFY 60

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
               I N+T   I ++++    YL ++ ++      +    A    +
Sbjct: 61  TVQVIYNRTQAVIPLLIVATVWYLIITTLLTSAQYYVERHFARGTAR 107


>gi|225386717|ref|ZP_03756481.1| hypothetical protein CLOSTASPAR_00465 [Clostridium asparagiforme
           DSM 15981]
 gi|225047195|gb|EEG57441.1| hypothetical protein CLOSTASPAR_00465 [Clostridium asparagiforme
           DSM 15981]
          Length = 223

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 82/199 (41%), Gaps = 4/199 (2%)

Query: 197 GIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNF 256
           G+++++  +  +       G  L LL              L  +  +     P +    +
Sbjct: 20  GLLMTILISIGTIFLSMIFGTILALLRHFCTG-KWAWLSGLTGVYIEFFRCTPNILWILW 78

Query: 257 IGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLL 316
           I  +      +    A + +T A +AEI+R GL  +P+GQ E+A + G +  +    ++L
Sbjct: 79  IRFTIKGNPLVLAIFACTLFTTAVMAEIIRGGLNGIPKGQFESAASQGFSFFQTLFYIVL 138

Query: 317 PQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTII---NQTGQAIEIILIWMFI 373
           PQ  +SIIP + SQ + ++K++S    V  A+ +     ++   +     I +       
Sbjct: 139 PQTYKSIIPAMLSQVITVIKDTSFLKVVDIAEFMRNSYVVMGKLSAPAHIIMLYSFIALC 198

Query: 374 YLSLSIMIALFMNRLNAKI 392
           Y  +   ++  +     K+
Sbjct: 199 YFIICFSLSCGVRYYQKKV 217



 Score = 36.8 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGR---LSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           G + T  ++   +  + I GT++   R         ++ +  VY+E FR  P ++ I ++
Sbjct: 20  GLLMTILISIGTIFLSMIFGTILALLRHFCTGKWAWLSGLTGVYIEFFRCTPNILWILWI 79


>gi|260904717|ref|ZP_05913039.1| polar amino acid ABC transporter, inner membrane subunit
           [Brevibacterium linens BL2]
          Length = 220

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 68/228 (29%), Positives = 105/228 (46%), Gaps = 13/228 (5%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
              + L    LS    T+       + + VLG +L+       R       +     YI+
Sbjct: 1   MDFLQLLEMFLSGIWGTVKLFTVALIGALVLGTILAGM-----RVSPTPVLRIAASTYIN 55

Query: 226 TFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIV 285
                 L TLV+    + L F           G ++    F+   +AL+ YTA F+AE +
Sbjct: 56  VVRNTPL-TLVMFFCAFGLPFLD------IRFGSTSSFNSFIYATLALTAYTACFVAETL 108

Query: 286 RSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVG 345
           RSG+  +P GQ EAA A+GLT  +    V+LPQA R++IPPL S  + LLKN+S+A A  
Sbjct: 109 RSGISTIPVGQAEAARAVGLTFGQTLSQVILPQAFRTVIPPLGSVIIALLKNTSIASAFN 168

Query: 346 FADLVSVGGTIINQTGQAIEIILIWM-FIYLSLSIMIALFMNRLNAKI 392
             +L+S     I   G  +  +L      YL L++++    + L  K+
Sbjct: 169 NRELISAMRNAIEVRGDLVIPLLFGTALAYLILALILGRVFDYLERKL 216



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L G   T  L    +I A ++GT++   R+S   ++      Y+ V RN P  +V+FF 
Sbjct: 10  FLSGIWGTVKLFTVALIGALVLGTILAGMRVSPTPVLRIAASTYINVVRNTPLTLVMFFC 69

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
              +  +      +      ++  
Sbjct: 70  AFGLPFLDIRFGSTSSFNSFIYAT 93


>gi|315639993|ref|ZP_07895120.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
 gi|315484255|gb|EFU74724.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Enterococcus italicus DSM 15952]
          Length = 226

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 91/223 (40%), Gaps = 17/223 (7%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L +    +     I + SF++G +L++  T L            P+ +   F +  L
Sbjct: 16  WQSLPYVLKGIPYTLGIALISFIIGNLLAIAFTLLLERAIA------PVRWFIRFYVSFL 69

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
             + +I L +  +F  PV  Q   I  S +S    S            + EI R  L  V
Sbjct: 70  RGIPMIVLLFLFYFGMPV--QLTAIQASCLSFSLSSSAF---------LTEIYRGALAGV 118

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
             GQ +A  ALG ++ +  R V+ PQA  + +P L +  +++LK +SL   +   D+  +
Sbjct: 119 DSGQRDAGYALGFSYYQLMRQVIFPQAFVTTVPALGNVAMDVLKGTSLTAMISVPDIFQL 178

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
              +  +      + ++   +Y  L ++I     +    +  K
Sbjct: 179 AKIVGGRQFDFFSMYILVGILYWLLCLLIGAGQKKAETYLLKK 221


>gi|255261825|ref|ZP_05341167.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
 gi|255104160|gb|EET46834.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Thalassiobium sp. R2A62]
          Length = 268

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 80/227 (35%), Gaps = 10/227 (4%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N       TL          F  V  +   LFAT L+                  FL  G
Sbjct: 26  NFTLCDQFTLIGSGMIWNIYFGIVALVTGFLFATLLAVGKSSANPWTRKSSEWFIFLFRG 85

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  +     Y +         F     +  S  ++   + L C TAA+  EI    L +
Sbjct: 86  SPLFIQFFFGYAVFASLKGSIPFF----APFSAAWLGALVVLFCNTAAYSGEIFYGALQS 141

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA---- 347
           +PRG +EAA A GLT     + V+ P  +R   P  T++ + L   ++L    GF     
Sbjct: 142 IPRGDIEAADAYGLTGWTRFKRVVWPTLLRLAWPAYTNEAIFLFHATTLVFFTGFPAWQQ 201

Query: 348 --DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
             D +       ++T        I    ++ L+I +      +N ++
Sbjct: 202 RGDALYYASYFADKTFNPFVPYPILAGYFIVLTICVISVFGLINRRL 248


>gi|254441207|ref|ZP_05054700.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
 gi|198251285|gb|EDY75600.1| ABC transporter, permease protein, putative [Octadecabacter
           antarcticus 307]
          Length = 269

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 82/216 (37%), Gaps = 13/216 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
           M  N    V + + G  L+  A  + +       +     +I  FL  G P  +     Y
Sbjct: 40  MIWNVYFGVVALLSGFFLAT-AVAVGKAARNPVIRKASEWFI--FLFRGSPLFIQFFFAY 96

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
                      F        +  ++   I L   T+A+  EI    L ++P+G  EAA A
Sbjct: 97  FFFLSLKGQYAFF----DPFTAAWLGALIVLFLNTSAYTGEIFYGALQSIPKGDTEAADA 152

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTI 356
            GL+     R V+ P  +R   P  T++ + L  +++L    GF       D +      
Sbjct: 153 FGLSGWSRFRRVIWPTMLRLAWPAYTNEAIFLFHSTTLVYFSGFPAWGQKGDALYYASFF 212

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            ++T        I  F ++ L+++I   M R+  ++
Sbjct: 213 ADKTFNPFVPYPILAFYFILLTLVIIAIMGRIGRRL 248


>gi|289672218|ref|ZP_06493108.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae FF5]
          Length = 112

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 59/110 (53%)

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           + AVP G++EAA ALG++  KA   ++LP+A R  +P  +++ + +LK S+LA  V   +
Sbjct: 1   MQAVPPGEVEAARALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLE 60

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           L  +  TII +T   +EI       YL ++ ++      L   + +   +
Sbjct: 61  LTGMARTIIARTYLPVEIFFAAGMFYLIMTFVLVQGFRLLEKLLRVDASR 110


>gi|15890314|ref|NP_355986.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|15158517|gb|AAK88771.1| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 221

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 15/208 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           +I + S V+G+  ++  T L R    +   A   +++           
Sbjct: 15  LPQLLDGAVVTLQIAILSMVIGLSFAILLT-LFRLSGNRVLGAFAAVWVEIARNTPA--- 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             +   Y  HF                   + +L + ++   A ++AE  R  L A+P  
Sbjct: 71  --LFQIYMAHFGLGNF--------GIHLSPYTALLVGIAFNNAGYLAENFRGALKAIPDT 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGG 354
           Q  +  +LG+T  +  RL+++PQ +R    P T+Q +  +  +SL V VG   DL  V  
Sbjct: 121 QTRSGRSLGMTSMQTFRLIIMPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGVTQ 180

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +  ++ +  E   +   IY  ++ ++ 
Sbjct: 181 ALNARSFRTFEFFALAAVIYYVIAKIVT 208



 Score = 44.6 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 39/100 (39%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +A   M+       L+   RLS N+++     V+VE+ RN P L  I+  
Sbjct: 18  LLDGAVVTLQIAILSMVIGLSFAILLTLFRLSGNRVLGAFAAVWVEIARNTPALFQIYMA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + +          L  G+  NN G           A 
Sbjct: 78  HFGLGNFGIHLSPYTALLVGIAFNNAGYLAENFRGALKAI 117


>gi|227511851|ref|ZP_03941900.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
 gi|227084941|gb|EEI20253.1| amino acid ABC superfamily ATP binding cassette transporter,
           membrane protein [Lactobacillus buchneri ATCC 11577]
          Length = 223

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 13/214 (6%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
                F+FS ++GI ++  + +      +K GK++  +YI               +    
Sbjct: 20  LLIASFIFSSLIGIGVAFLSLQ-----DDKVGKSVSRVYIGLVRGTPPL-----LMLLLT 69

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
           ++  P L  F  I  S    + +     LS     ++AE  RS  ++V  GQ++AA ++G
Sbjct: 70  YYGLPKLLSFIGI-DSNNWAKIIFGIFGLSVGWGGYMAEAFRSAYLSVDEGQIKAAYSVG 128

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG--Q 362
           +T   A R ++LPQA    IP + +  + LLK +SL   +G AD+      + N      
Sbjct: 129 MTGETALREIILPQAFLIAIPNVENLLIGLLKATSLVYVIGLADMYQNASNLSNVNQGVY 188

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
            ++I +I   IY  L+ +I        +  A  E
Sbjct: 189 QLKIFIILALIYWILASLIEWGFRTYQSHFAHVE 222


>gi|302876280|ref|YP_003844913.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|307687012|ref|ZP_07629458.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
 gi|302579137|gb|ADL53149.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium cellulovorans 743B]
          Length = 221

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 6/172 (3%)

Query: 228 LIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVS-----PEFMSLYIALSCYTAAFI 281
           + + +  L  I   Y ++  + P+L Q  F+                  + L+    +++
Sbjct: 44  VYYRVKGLKQIVGVYVEVSRNTPLLIQLFFLYYGLPQVGVKLDAITCAVVGLAFLGGSYM 103

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           +E  R G  AV + Q+EA +++GLT  +  R V+  QA    +P L +  + +LK +S+ 
Sbjct: 104 SEAFRGGFEAVSKTQVEAGLSIGLTKPQLIRYVIFLQAFAVAVPSLGANAIFILKETSIV 163

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
            A+  ADL+ V   +I    +  E + + +  YL + + I+L    +  ++ 
Sbjct: 164 SAIALADLMFVAKDLIGMYYKTTEALTMLVVAYLIILLPISLIFTTIERRVR 215


>gi|191637275|ref|YP_001986441.1| L-cystine transport system permease protein tcyL [Lactobacillus
           casei BL23]
 gi|190711577|emb|CAQ65583.1| L-cystine transport system permease protein tcyL [Lactobacillus
           casei BL23]
 gi|327381315|gb|AEA52791.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Lactobacillus casei LC2W]
 gi|327384486|gb|AEA55960.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Lactobacillus casei BD-II]
          Length = 228

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 7/228 (3%)

Query: 171 LNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-LI 229
           +    L      +     I  +      +  L    L    H    + L LLY     L+
Sbjct: 1   MGFATLFEVLQHLAPYLGITFWIIGASALFVLVFGALISLVHFSHSRVLELLYNGFVSLM 60

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              P L+L+ L +   +  P+L Q   I   +   +     +A+    +A+ +E +RS  
Sbjct: 61  RATPVLLLLMLVF---YGMPLLFQLVGID-ISWWAKTGFAILAIGLENSAYFSENLRSAY 116

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            ++P+ Q +A  +L  +   A R +L PQ   + +P + +  + ++KNS+    +G  DL
Sbjct: 117 ASLPQSQYDACTSLHFSRIAAIRRILGPQVFAAALPNIGNTLITIVKNSAYVYVIGITDL 176

Query: 350 VSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
                 I   +   Q + + +    IY ++   I  F  +L  + +  
Sbjct: 177 YEQAQIIAQASFGKQQVVVFIALSLIYWAICAAIQAFFTQLERRWSWS 224


>gi|325062211|gb|ADY65901.1| amino acid ABC transporter, membrane spanning protein
           [Agrobacterium sp. H13-3]
          Length = 221

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 15/208 (7%)

Query: 176 LSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTL 235
           L           +I + S V+G+  ++  T L R    +   A+  +++           
Sbjct: 15  LPQLLDGAVVTLQIAILSMVIGLSCAIVLT-LFRLSGNRMLGAIAAVWVEIARNTPA--- 70

Query: 236 VLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRG 295
             +   Y  HF                   + +L   ++   A ++AE  R  L A+P  
Sbjct: 71  --LFQIYMAHFGLGNF--------GIHLSPYTALLAGIAFNNAGYLAENFRGALKAIPDT 120

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF-ADLVSVGG 354
           Q  +  +LG+T  +  RL+++PQ +R    P T+Q +  +  +SL V VG   DL  V  
Sbjct: 121 QTRSGRSLGMTSMQTFRLIIMPQMLRVAFLPATNQMVWAILMTSLGVTVGMNTDLAGVTQ 180

Query: 355 TIINQTGQAIEIILIWMFIYLSLSIMIA 382
            +  ++ +  E   +   IY  ++ ++ 
Sbjct: 181 ALNARSFRTFEFFALAAVIYYVIAKIVT 208



 Score = 45.7 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 40/100 (40%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G V T  +A   M+       ++   RLS N+++  I  V+VE+ RN P L  I+  
Sbjct: 18  LLDGAVVTLQIAILSMVIGLSCAIVLTLFRLSGNRMLGAIAAVWVEIARNTPALFQIYMA 77

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAK 188
           +  + +          L  G+  NN G           A 
Sbjct: 78  HFGLGNFGIHLSPYTALLAGIAFNNAGYLAENFRGALKAI 117


>gi|58337336|ref|YP_193921.1| ABC transporter [Lactobacillus acidophilus NCFM]
 gi|227903960|ref|ZP_04021765.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus acidophilus ATCC 4796]
 gi|58254653|gb|AAV42890.1| ABC transporter [Lactobacillus acidophilus NCFM]
 gi|227868351|gb|EEJ75772.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus acidophilus ATCC 4796]
          Length = 224

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 94/227 (41%), Gaps = 12/227 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +      L   T      A ++   ++  I L +     +     +T     + ++    
Sbjct: 2   VHSGINVLFEGTNLARLMAGLWASIWIAAISLVIGLLLGTILGILRTMPNKIVRFVLRLY 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           +     +  I L Y +++  P     N+              +A + + AA  ++IVR  
Sbjct: 62  LEFFRIVPTIVLLYLVYYILPRTFHVNW-------SATWMAVLAFALWVAAEFSDIVRGA 114

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +VP+ Q E+ +ALGL++ +  R VLLPQA++  +P   +    ++K +SL + +   +
Sbjct: 115 LESVPKNQRESGLALGLSNIQLFRYVLLPQAIKLELPATINLATRVIKTTSLLMVINIME 174

Query: 349 LVSVGGTIINQTGQ-----AIEIILIWMFIYLSLSIMIALFMNRLNA 390
           +++VG  II    Q        I      +Y  L   ++ +  RL A
Sbjct: 175 VINVGQQIIEANNQKYPTGVFWIYGFIFILYFILDYPLSAWAKRLTA 221


>gi|139438443|ref|ZP_01771959.1| Hypothetical protein COLAER_00949 [Collinsella aerofaciens ATCC
           25986]
 gi|133775982|gb|EBA39802.1| Hypothetical protein COLAER_00949 [Collinsella aerofaciens ATCC
           25986]
          Length = 219

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 94/231 (40%), Gaps = 20/231 (8%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
                   +     T     + F  + VL + +++      R    K  +    LY+  F
Sbjct: 7   WSLYGQNYIDALLATWGMTLESFAIAMVLAVAVTVM-----RVSPLKPLRVFGDLYVQVF 61

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
                  L++I +     +  P L          V P    + +A     +AF +E   S
Sbjct: 62  RNIPGIALLIIVV-----YALPPLK--------VVLPYRTCVIVATVLLGSAFGSENFMS 108

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF- 346
           G+  V  GQ+EAA +LG++  +    +++PQA+RS + P+T+ ++ ++  ++L   V   
Sbjct: 109 GINTVGVGQVEAARSLGMSFNRILAKIVIPQALRSSVLPMTNLFIAVMLTTALGSQVPLK 168

Query: 347 -ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             +L  V   I  ++   +    I    YL  + +++   N ++ K+ +  
Sbjct: 169 PQELTGVVSYINTRSLGGVAAFFISALGYLGTAFVVSHIGNYIDKKVRILR 219



 Score = 39.9 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 31/69 (44%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y    +   + T+ +       A ++   V   R+S  K +     +YV+VFRNIP + +
Sbjct: 10  YGQNYIDALLATWGMTLESFAIAMVLAVAVTVMRVSPLKPLRVFGDLYVQVFRNIPGIAL 69

Query: 145 IFFLYKSVL 153
           +  +  ++ 
Sbjct: 70  LIIVVYALP 78


>gi|77456453|ref|YP_345958.1| amino acid ABC transporter permease [Pseudomonas fluorescens Pf0-1]
 gi|77380456|gb|ABA71969.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Pseudomonas fluorescens Pf0-1]
          Length = 221

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 5/195 (2%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
            T    F+ S +   + ++  T         T   + LL  +  +        L+ L  +
Sbjct: 1   MTFDYAFILSTLPAFLKAVGVTLQVGLIAIGTSLLVALLNATILVFRTPYLQKLVGLYVE 60

Query: 244 LHFDKPVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQME 298
           L  + P+L Q  F+  +          F +  I ++    A++ E++R+G+ AVP+ Q+E
Sbjct: 61  LARNTPLLIQLFFVYFALPALGIKVSGFTAAIITMTFLGGAYLTEVLRAGVDAVPQAQLE 120

Query: 299 AAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIIN 358
           +  ++GL+H +  R V+LPQA    +P L + ++ LLK +++  AV   +++    + I 
Sbjct: 121 SGRSIGLSHGQLLRYVILPQAGILSLPSLFANFIFLLKETTVVSAVAVPEILYTTKSYIA 180

Query: 359 QTGQAIEIILIWMFI 373
              +  E++ +   I
Sbjct: 181 LYYKTYEMLAVLTLI 195



 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    S   A L     T  +    +  + ++  L     +     +  +  +YVE+ R
Sbjct: 4   DYAFILSTLPAFLKAVGVTLQVGLIAIGTSLLVALLNATILVFRTPYLQKLVGLYVELAR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           N P L+ +FF+Y ++ ++   
Sbjct: 64  NTPLLIQLFFVYFALPALGIK 84


>gi|238921539|ref|YP_002935054.1| polar amino acid ABC transporter, inner membrane subunit
           [Edwardsiella ictaluri 93-146]
 gi|238871108|gb|ACR70819.1| polar amino acid ABC transporter, inner membrane subunit
           [Edwardsiella ictaluri 93-146]
          Length = 223

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 73/198 (36%), Gaps = 8/198 (4%)

Query: 194 FVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQ 253
            + G+V            + K  +   L+      I       LI L + +++  P    
Sbjct: 28  MLAGVVSITGLLGGMLLLYMKISRRKWLIRSVDGYISFFVGTPLIVLLFVVYYGLP---- 83

Query: 254 FNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRL 313
                       F    +  +   +A+ A  + S  + +   ++ AA A G T  +    
Sbjct: 84  ----NYGVHLSSFAVAVLGFTLNVSAYNASYLYSAWLGLDEAELRAARAQGFTDLQVYWH 139

Query: 314 VLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFI 373
           ++LPQ      P LT+Q +  LK+SS A  +GF D  S    + +   Q     L     
Sbjct: 140 IVLPQVFSRSTPSLTNQVIANLKDSSYAFLIGFIDFFSRIQEVASTNFQFFHAYLFAALS 199

Query: 374 YLSLSIMIALFMNRLNAK 391
           Y+++  +I L   +L  +
Sbjct: 200 YIAMVSVIVLSARQLEKR 217


>gi|70733737|ref|YP_257377.1| glutamine/glutamate ABC transporter permease [Pseudomonas
           fluorescens Pf-5]
 gi|68348036|gb|AAY95642.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           fluorescens Pf-5]
          Length = 221

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 5/190 (2%)

Query: 189 IFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDK 248
            F+ S +   + ++  T         T   + L+  +  +        LI L  +L  + 
Sbjct: 6   AFILSTLPAFLKAVGVTLQVGLIAIGTSLLVALINATLLVFRTPYLHRLIGLYVELARNT 65

Query: 249 PVLGQFNFIGGS-----TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
           P+L Q  F+  +          F +  I ++    A++ E++R+G+ AVP+ Q+E+  ++
Sbjct: 66  PLLIQLFFVYFALPALGIKVSGFTAAIITMTFLGGAYLTEVLRAGVEAVPQAQLESGRSI 125

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R V+LPQA    +P L + ++ LLK +++  AV   +++    + I    + 
Sbjct: 126 GLSQWQLLRYVILPQAGILSLPSLFANFIFLLKETTVVSAVAVPEILYTTKSYIALYYKT 185

Query: 364 IEIILIWMFI 373
            E++ +   I
Sbjct: 186 YEMLAVLTLI 195



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           + Y    S   A L     T  +    +  + ++  +     +     +  +  +YVE+ 
Sbjct: 3   LDYAFILSTLPAFLKAVGVTLQVGLIAIGTSLLVALINATLLVFRTPYLHRLIGLYVELA 62

Query: 137 RNIPPLVVIFFLYKSVLSVLPI 158
           RN P L+ +FF+Y ++ ++   
Sbjct: 63  RNTPLLIQLFFVYFALPALGIK 84


>gi|114764749|ref|ZP_01443932.1| ABC amino acid transporter, inner membrane subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114542798|gb|EAU45820.1| ABC amino acid transporter, inner membrane subunit [Roseovarius sp.
           HTCC2601]
          Length = 220

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 12/226 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF-L 228
            ++   +      +     + +    L I+ SL    +         K L  L       
Sbjct: 1   MIDWAYIWAAVPDLMRGLGMTLIVSFLAILFSLIGGVIGCALRVSPIKPLSWLVAGYVEF 60

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
           I G P LV +   +   +  P LG    I        F S  +ALS + + F  E  R+G
Sbjct: 61  IRGTPYLVQVFFVF---YGLPSLGLRLSI--------FWSGVVALSLWASVFHIESFRAG 109

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           L +V +    A+ +LGL        V+LP A RS +P   +  ++ +KNS+   A+G  +
Sbjct: 110 LSSVSKDIRNASASLGLRRWHHGLFVVLPIAARSALPSTLNTIVSTIKNSAYLQAIGLVE 169

Query: 349 LVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
           L  V    I    ++IE+ L    IYL++ ++++   +RL  ++  
Sbjct: 170 LTFVAVDRIAYEFRSIEMFLSICVIYLAVVLVVSTLGHRLERRLDR 215



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 4/105 (3%)

Query: 82  DSSYATA----ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
           D +Y  A    ++ G   T  ++F  ++ + I G +  A R+S  K ++W+   YVE  R
Sbjct: 3   DWAYIWAAVPDLMRGLGMTLIVSFLAILFSLIGGVIGCALRVSPIKPLSWLVAGYVEFIR 62

Query: 138 NIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLT 182
             P LV +FF++  + S+             + L        +  
Sbjct: 63  GTPYLVQVFFVFYGLPSLGLRLSIFWSGVVALSLWASVFHIESFR 107


>gi|237752284|ref|ZP_04582764.1| glutamine ABC transporter permease GlnP [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229375773|gb|EEO25864.1| glutamine ABC transporter permease GlnP [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 221

 Score = 98.5 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +   F +      +      +     +  F  V  I+L  F   L + +  +   A+   
Sbjct: 1   MSFNFDILFMQNAIPTFLKALWLTLHLSFFGIVFSIILGFFI-ALIQFYKIRFLNAVAQG 59

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           YI   L    P L+ +   + L++  P +              ++   I ++    +++A
Sbjct: 60  YIE--LSRNTPLLIQL---FFLYYGLPQI--------GLKLDSYICALIGITFLGGSYMA 106

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E  R+GL +V + Q+E+  +LGL+ ++    ++LPQ++   +P + +  + LLK +S+  
Sbjct: 107 ESFRAGLESVGKIQIESGRSLGLSEKQLVFSIILPQSLMVSLPYIGANVIFLLKETSVVS 166

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
           A+   D++ V   +I    +  E +L+ +  YL + + +++  + L     
Sbjct: 167 AIALVDVLFVTKDLIGSYYKTNETLLLLVLCYLVVLLPLSIVFSMLEKHYK 217



 Score = 48.8 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 34/67 (50%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            L     T  L+F G++ + I+G  +   +    + +  + + Y+E+ RN P L+ +FFL
Sbjct: 17  FLKALWLTLHLSFFGIVFSIILGFFIALIQFYKIRFLNAVAQGYIELSRNTPLLIQLFFL 76

Query: 149 YKSVLSV 155
           Y  +  +
Sbjct: 77  YYGLPQI 83


>gi|209516856|ref|ZP_03265706.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209502672|gb|EEA02678.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 245

 Score = 98.5 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 13/207 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKAL-----PLLYISTFLIFGLPTLVLIALKYQLH 245
           +    L +V+S+ +  LS       G AL      +    T ++     + ++ L +   
Sbjct: 23  LGGAALTVVMSIVSALLSAVVGLAGGIALSMTRGAVYLALTAVVGFFRAIPVLMLIFWTF 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L   +        P   ++  AL+    A+++  V++G+ AV  GQ +AA +LG+
Sbjct: 83  FLMPMLLHIDV-------PGLATVICALALIGGAYLSHSVQAGIAAVGAGQAQAAASLGM 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +A R V LPQA+R ++P   +Q++ L+K++SLA  VG  +   +   + N+     +
Sbjct: 136 TRWQALRYVQLPQAIRIMMPSFVNQWVTLIKDTSLAYIVGVPEFTFLANQVNNRLMVYPV 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +I L    +YL L   +      L  +
Sbjct: 196 QIFLFVGVVYLVLCSTLQYGATWLLKR 222


>gi|302388263|ref|YP_003824085.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
 gi|302198891|gb|ADL06462.1| polar amino acid ABC transporter, inner membrane subunit
           [Clostridium saccharolyticum WM1]
          Length = 220

 Score = 98.5 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 84/203 (41%), Gaps = 4/203 (1%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
           V   + G+ +++    L+       G  L L+   +   +     V +A   +     P 
Sbjct: 14  VLFMLKGLRMTVMIAVLATIISMFFGTLLALIRTYSTGKWKWAGGV-VAAYTEFFRCTPN 72

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           L    +I  +    +      A+S +T+A +AEI R GL ++P+GQ E A + G +  + 
Sbjct: 73  LLWILWIYFTVKGNKVGVSVFAISLFTSAVMAEIFRGGLNSIPKGQFEGAQSQGFSFAQT 132

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA---IEII 367
              ++LPQ  + +IP L SQ + ++K++S    V  A+ +     ++         + + 
Sbjct: 133 LIYIVLPQTYKKVIPALLSQVITIIKDTSFLKMVDVAEFMRNCSVVLGSIYDVRGMLMLF 192

Query: 368 LIWMFIYLSLSIMIALFMNRLNA 390
                 Y ++   ++  +     
Sbjct: 193 AFEALCYFTICFALSCAVRGYQK 215



 Score = 38.4 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 51/147 (34%), Gaps = 7/147 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSAN---KLVAWICRVYVEVFRNIPPLVVI 145
           +L G   T  +A    I +   GTL+   R  +    K    +   Y E FR  P L+ I
Sbjct: 17  MLKGLRMTVMIAVLATIISMFFGTLLALIRTYSTGKWKWAGGVVAAYTEFFRCTPNLLWI 76

Query: 146 FFLYKSVLSVLPIPDHSIVLPFGMFLNNRG----LSFPTLTMDTNAKIFVFSFVLGIVLS 201
            ++Y +V           +  F   +        L+         A+   FSF   ++  
Sbjct: 77  LWIYFTVKGNKVGVSVFAISLFTSAVMAEIFRGGLNSIPKGQFEGAQSQGFSFAQTLIYI 136

Query: 202 LFATRLSRHFHEKTGKALPLLYISTFL 228
           +      +       + + ++  ++FL
Sbjct: 137 VLPQTYKKVIPALLSQVITIIKDTSFL 163


>gi|297202814|ref|ZP_06920211.1| glutamate transporter permease [Streptomyces sviceus ATCC 29083]
 gi|297148211|gb|EFH28893.1| glutamate transporter permease [Streptomyces sviceus ATCC 29083]
          Length = 222

 Score = 98.5 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 21/237 (8%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFA------TRLSRHFHEKTGKAL 219
            F        L    +T+   A   V S + G VL+          R     +    + +
Sbjct: 1   MFDFLEGYDVLGAFWMTVKLTALSAVGSLIWGTVLAAMRVSPVPLMRGFGTAYVNIVRNI 60

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           PL  I  F   GL  +  + +    +FD                  F    +    YTAA
Sbjct: 61  PLTVIIVFTSLGLADIFGVTMGAADNFDVQ---------------GFRLAVLGFIVYTAA 105

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+ E +RSG+  VP GQ EAA A+GL   +  RL++LPQA R++I PL +  + L KN++
Sbjct: 106 FVCEAIRSGINTVPLGQAEAARAIGLNFSQTLRLIVLPQAFRAVINPLANVLIALTKNTT 165

Query: 340 LAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +A A+G A+   +   +I    Q + I  ++   ++ L++   L +  L  ++A+K 
Sbjct: 166 VAAAIGVAEAALLMKKMIENEAQTLAIGAVFALGFVVLTLPTGLLLGWLAKRLAVKR 222



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 30/67 (44%)

Query: 90  LVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLY 149
           L  F  T  L     + + I GT++ A R+S   L+      YV + RNIP  V+I F  
Sbjct: 11  LGAFWMTVKLTALSAVGSLIWGTVLAAMRVSPVPLMRGFGTAYVNIVRNIPLTVIIVFTS 70

Query: 150 KSVLSVL 156
             +  + 
Sbjct: 71  LGLADIF 77


>gi|163746019|ref|ZP_02153378.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
 gi|161380764|gb|EDQ05174.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Oceanibulbus indolifex HEL-45]
          Length = 268

 Score = 98.5 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 82/237 (34%), Gaps = 14/237 (5%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
           N       TL          F  +  +    FAT L                   F+  G
Sbjct: 26  NFTLCEQFTLIGSGMLWNIYFGVIALLTGFFFATALGVGKASPNPWFRKPAEWFIFIFRG 85

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
            P  +     Y L         F     +  +  ++   I L   TAA+  EI    L +
Sbjct: 86  SPLFIQFFFGYFLFLTLKSEYAFF----APFTAAWLGALIVLFLNTAAYSGEIFYGALQS 141

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA---- 347
           +P+G +EAA A GL+     R V+ P ++R   P  T++ + L   ++L    GF     
Sbjct: 142 IPKGDVEAADAYGLSGWSRFRRVIWPTSLRLAWPAYTNEAIFLFHATTLVFFSGFPAWQQ 201

Query: 348 --DLVSVGGTIINQTGQAIEIILIWMFIYLSLSI----MIALFMNRLNAKIALKEKK 398
             D +       ++T        I    ++ L++    +  L  + LN  +   +++
Sbjct: 202 RGDALYYASYFADKTFNPFVPYPILAGYFILLTLCIISVFGLINSLLNRHLPQAQRR 258



 Score = 38.4 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           G +   +     ++      T +G G+ S N         ++ +FR  P  +  FF Y  
Sbjct: 39  GMLWNIYFGVIALLTGFFFATALGVGKASPNPWFRKPAEWFIFIFRGSPLFIQFFFGYFL 98

Query: 152 VL 153
            L
Sbjct: 99  FL 100


>gi|254449783|ref|ZP_05063220.1| ABC transporter, membrane spanning protein [Octadecabacter
           antarcticus 238]
 gi|198264189|gb|EDY88459.1| ABC transporter, membrane spanning protein [Octadecabacter
           antarcticus 238]
          Length = 201

 Score = 98.5 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 14/209 (6%)

Query: 184 DTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQ 243
                + V    L +++ +    L R    K  +    +++   +I   P LV I   + 
Sbjct: 1   MFTLGLSVAGIFLALLIGVSGVALQR-SGRKAFRIPVRIFVE--VIRNTPFLVQIFFLF- 56

Query: 244 LHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIAL 303
                     F            ++  IAL+    A+  EI+R G+ ++PRGQ+EA  AL
Sbjct: 57  ----------FALPYLGVRLSPTVTAIIALAINGGAYAIEIIRGGVESIPRGQVEAGAAL 106

Query: 304 GLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA 363
           GL+  +  R ++L  A+R+I P LTSQ++ L   SS+  ++  ++L      I + T ++
Sbjct: 107 GLSRAQIFRDIVLVPALRAIYPALTSQFILLTLTSSVCSSISASELTHFAQRIESATFRS 166

Query: 364 IEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            E+      +YL +S M+   +     ++
Sbjct: 167 FEVYFTITGLYLLISWMMMTMLAVFGRRL 195


>gi|118592148|ref|ZP_01549541.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
 gi|118435120|gb|EAV41768.1| ABC amino acid transporter, inner membrane subunit [Stappia
           aggregata IAM 12614]
          Length = 244

 Score = 98.5 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 9/211 (4%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
            F+  +++SL     +          + +      +     TLV +     L  +  ++ 
Sbjct: 14  GFIQTLLMSLVVA--AGTTMVAIVLVIAVRSRQRVIRIAGYTLVEVLRDIPLMVNVLMVY 71

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
               + G    P F S  IA+S +  A  A+I+R+GL +V  GQ EAA A      K   
Sbjct: 72  FMLPLVGLGFGP-FWSACIAISVWGGANGAQILRAGLNSVGNGQREAAAAFNFGPAKTLL 130

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT------GQAIEI 366
           L++LPQAM  IIPP       +++ +SL   VG  +L+  G  +I QT        A  +
Sbjct: 131 LIVLPQAMPVIIPPYVGLMTAVVQATSLGAVVGAQELLRSGQILIEQTTIMRGGSPAYLV 190

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
               + +Y  L  +I+    RL A      +
Sbjct: 191 YGSILVVYFILCSLISFAGGRLEAFYKRPYR 221


>gi|114764750|ref|ZP_01443933.1| ABC amino acid transporter, inner membrane subunit [Pelagibaca
           bermudensis HTCC2601]
 gi|114542799|gb|EAU45821.1| ABC amino acid transporter, inner membrane subunit [Roseovarius sp.
           HTCC2601]
          Length = 243

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 17/218 (7%)

Query: 186 NAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
             +  + S V+ +  +  A  L      K      L Y    ++  +P +V + + Y   
Sbjct: 15  FVQTLLMSLVVALGTTAVAILLVAMLQSKLRLVSRLGYALVEVLRDIPLMVNVLMVY--- 71

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P++G             F S+ +A+S +  A  A+I+R+GL +V +GQ E A A   
Sbjct: 72  FMLPLIGLGFG--------PFWSVCVAISIWGGANGAQILRAGLHSVGQGQRETAAAFNF 123

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT----- 360
              K   L++LPQAM  I+PP  S    +++ +SL   VG  +L+  G  +I QT     
Sbjct: 124 GPVKTLFLIVLPQAMPVILPPYISLMTAVVQATSLGAVVGATELLRAGQILIEQTTIMRG 183

Query: 361 -GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              A  +    + +Y  L  +I+    RL A      +
Sbjct: 184 GSPAYLVYGSILVVYFVLCSLISFVGARLEAYYQRPYR 221



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 35/81 (43%)

Query: 85  YATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVV 144
           Y   +  GFV T  ++    +  T +  L+ A   S  +LV+ +    VEV R+IP +V 
Sbjct: 7   YRVFLFSGFVQTLLMSLVVALGTTAVAILLVAMLQSKLRLVSRLGYALVEVLRDIPLMVN 66

Query: 145 IFFLYKSVLSVLPIPDHSIVL 165
           +  +Y  +  +         +
Sbjct: 67  VLMVYFMLPLIGLGFGPFWSV 87


>gi|330903629|gb|EGH34201.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 130

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 63/104 (60%)

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVL 315
           F+       + +   I +  + +A+IAE+VR G+ A+P+GQ EAA A+GL + ++  LV+
Sbjct: 19  FMPEGMNFDKLLRALIGVILFQSAYIAEVVRGGMQAIPKGQYEAASAMGLGYWRSMGLVI 78

Query: 316 LPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
           LPQA++ +IP + + ++ L K++SL + +G  DL++        
Sbjct: 79  LPQALKMVIPGIVNTFIALFKDTSLVIIIGLFDLLNSVKQATAD 122


>gi|317405302|gb|EFV85627.1| hypothetical protein HMPREF0005_05119 [Achromobacter xylosoxidans
           C54]
          Length = 152

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 3/127 (2%)

Query: 266 FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIP 325
           F     AL+ +TA  +AE++R  L A+P GQM AA ALG+    A   V+ PQA R   P
Sbjct: 22  FGMALAALTLHTACLLAEVLRGALQAIPPGQMMAARALGMRPAVAYWTVIWPQARRIAAP 81

Query: 326 PLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT---GQAIEIILIWMFIYLSLSIMIA 382
                ++  +K++SL   +G  D++     ++  T      +E+ L    +Y S S+ +A
Sbjct: 82  AALGVFVGAVKDTSLVSIIGVFDVLGAAKAVVAGTDWRAYHVEVYLAVALLYFSASLALA 141

Query: 383 LFMNRLN 389
               R+ 
Sbjct: 142 RVARRME 148


>gi|182419551|ref|ZP_02950799.1| amino acid ABC transporter, permease protein [Clostridium butyricum
           5521]
 gi|182376586|gb|EDT74161.1| amino acid ABC transporter, permease protein [Clostridium butyricum
           5521]
          Length = 210

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 7/208 (3%)

Query: 182 TMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALK 241
                 K  +   + G+ L+L    +S       G  L +L   +  IFG     L A+ 
Sbjct: 1   MDMIFTKTNILFLLQGLKLTLTIAVISIFLSMIFGTILAVLRNYSKGIFGK----LAAIY 56

Query: 242 YQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAI 301
            ++  + P L     I          S  ++ + +T A IAEIVR G+ +V  GQ EA+ 
Sbjct: 57  IEIFRNTPSLLWILSIRFLIPIKPMYSGILSFTLFTTAAIAEIVRGGMNSVNAGQYEASY 116

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           + G +  +  R ++LPQ+ ++ IP + SQ   ++K++S   AVG  +    G  ++    
Sbjct: 117 SQGFSKIQTLRYIILPQSFKNCIPTILSQSSTVIKDTSYLWAVGIEEFTGKGMILMGSFA 176

Query: 362 QAIEIILIWMFI---YLSLSIMIALFMN 386
            + ++ L++  I   Y  ++ +++  M 
Sbjct: 177 TSTQVFLLFGTIAASYFIINFILSCTMR 204



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 3/91 (3%)

Query: 82  DSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
             +    +L G   T  +A   +  + I GT++   R  +  +   +  +Y+E+FRN P 
Sbjct: 6   TKTNILFLLQGLKLTLTIAVISIFLSMIFGTILAVLRNYSKGIFGKLAAIYIEIFRNTPS 65

Query: 142 LVVIFFLYKSVLSVLPIPDHSIVLPFGMFLN 172
           L+ I  +      +   P +S +L F +F  
Sbjct: 66  LLWILSIR---FLIPIKPMYSGILSFTLFTT 93


>gi|308177956|ref|YP_003917362.1| glutamate ABC transporter inner membrane subunit GluC [Arthrobacter
           arilaitensis Re117]
 gi|307745419|emb|CBT76391.1| glutamate ABC transporter, inner membrane subunit GluC
           [Arthrobacter arilaitensis Re117]
          Length = 225

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 19/239 (7%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
           +     +F          + +       + + VLG +L+L      R     + +A+   
Sbjct: 1   MENYLSIFTEYDIPGAFWVNIQLTFWAAIGALVLGTILALL-----RISPVGSFQAIGTS 55

Query: 223 YISTFLIFGLPTLVL---IALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
           Y++      L  ++L   +AL  QL F      Q NF         F    + L+ Y AA
Sbjct: 56  YVNLIRNTPLTIIILFCVLALYGQLGFVLSGDFQANF---------FRLAVVGLAVYHAA 106

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
           F+ E +RSG+  VP GQ EAA A+GL+   A RLV+LPQA R  I PL +  + L+KNS+
Sbjct: 107 FVCEAIRSGVNTVPLGQAEAARAIGLSFLPAARLVILPQAFRGAIVPLGNTLIALIKNST 166

Query: 340 LAVAVGFA-DLVSVGGTIIN-QTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           +A     A +  SV  T+I  +    I I L +   ++ + I + L     + K+A+  
Sbjct: 167 VAAVGSVATESSSVMKTMIEFRADIVIPIFLTFAIGFVIIVIPVGLLTTWASKKLAVAR 225


>gi|25809421|emb|CAD57653.1| general L-amino acid transport system permease protein AapQ
           [Rhizobium etli]
          Length = 102

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 69/102 (67%), Positives = 84/102 (82%)

Query: 296 QMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGT 355
           Q EAA ALGL     TRLV++PQA+R IIPPL+SQYLNL KNSSLA+A+GFADLV+VG T
Sbjct: 1   QTEAAGALGLHPSSITRLVVIPQALRIIIPPLSSQYLNLTKNSSLAIAIGFADLVAVGST 60

Query: 356 IINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
            +NQTGQA+E+ILIWM IYL LS++ +L MN  NAK+AL E+
Sbjct: 61  TLNQTGQAVEVILIWMVIYLGLSVVTSLLMNWFNAKMALVER 102


>gi|89900315|ref|YP_522786.1| amino acid ABC transporter permease [Rhodoferax ferrireducens T118]
 gi|89345052|gb|ABD69255.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Rhodoferax ferrireducens T118]
          Length = 237

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 6/199 (3%)

Query: 200 LSLFATRLSRHFHEKTGKALPLLYI---STFLIFGLPTLVLIALKYQ-LHFDKPVLGQFN 255
           L++ A          TG   PL ++    T+++ G P L+ + L Y  L   + +  +++
Sbjct: 30  LAVGAVLALLCALALTGPWAPLRWVVGAYTYVMRGTPLLIQVYLIYYGLGQLEWIQARWD 89

Query: 256 FIGGSTVSPE-FMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLV 314
            +   T   E F    +A S  TA + AE++   +     G++EAA A G++  K    +
Sbjct: 90  TVWPWTHFKEPFFCALLAFSLNTAGYTAEMLAGAIRETAAGEIEAAQAYGMSRFKVMLHI 149

Query: 315 LLPQAMRSIIPPLTSQYLNLLKNSSLAVAV-GFADLVSVGGTIINQTGQAIEIILIWMFI 373
           +LP AMR  +P  +++ + +L+ +SLA AV    D+ +    I +      E  L    I
Sbjct: 150 VLPSAMRRTLPAYSNEVVMMLQATSLASAVPAMLDVTAAASRIYSDYYLPFEAYLAAAAI 209

Query: 374 YLSLSIMIALFMNRLNAKI 392
           YL  S  +  F      ++
Sbjct: 210 YLVASFCLIGFFRFSEGRL 228


>gi|66046175|ref|YP_236016.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           syringae B728a]
 gi|63256882|gb|AAY37978.1| Amino acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine [Pseudomonas syringae pv. syringae
           B728a]
          Length = 221

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 88/205 (42%), Gaps = 14/205 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +    ++ + + +  + +++    ++     K      L+ +
Sbjct: 1   MTFDYAFAISTLPAFLKAIGVTLQVGLIAILTSLTVAVVNAAIATF---KVPVLHRLVPV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P L+ +   Y           F           F S  IA++    A++ EI
Sbjct: 58  YVELARNTPLLIQLFFIY-----------FALPTLGIRVSGFASAVIAMTFLGGAYLTEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++  AV
Sbjct: 107 LRAGIEAVPKTQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILI 369
              +++    + I    +  E++ +
Sbjct: 167 AVPEILYTTKSYIALYYKTYEMLAV 191



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    S   A L     T  +    ++ +  +  +  A       ++  +  VYVE+ R
Sbjct: 4   DYAFAISTLPAFLKAIGVTLQVGLIAILTSLTVAVVNAAIATFKVPVLHRLVPVYVELAR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           N P L+ +FF+Y ++ ++   
Sbjct: 64  NTPLLIQLFFIYFALPTLGIR 84


>gi|77465461|ref|YP_354964.1| ABC polar amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126463863|ref|YP_001044976.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
 gi|77389879|gb|ABA81063.1| ABC polar amino acid transporter, inner membrane subunit
           [Rhodobacter sphaeroides 2.4.1]
 gi|126105674|gb|ABN78204.1| polar amino acid ABC transporter, inner membrane subunit
           [Rhodobacter sphaeroides ATCC 17029]
          Length = 226

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 14/232 (6%)

Query: 166 PFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIS 225
            F     N  +    L                ++    +  L+       G  +   +I 
Sbjct: 6   RFLATFFNARIFARYLPDMLAGVWTTIWLAGAVIALGLSLGLALACLRAYGWRIANFFII 65

Query: 226 TFLIFGLPT--LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAE 283
            F   G     LVLI + Y           F   G     P  + L + L    AAF  E
Sbjct: 66  CFADMGRALPPLVLILIMY-----------FGLPGLGLRMPGPLVLILVLGTVLAAFAEE 114

Query: 284 IVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVA 343
           I  +GL +VP+GQ EA  A GL   +    + LPQA R  +PPL ++ L + K ++L   
Sbjct: 115 IFWAGLTSVPKGQWEAGRATGLGFTQTLVQIALPQAARLALPPLVNRVLAISKMTALGSV 174

Query: 344 VGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           +G ++++SV  T  + TG A   + +    Y+ + + + +    L  + A K
Sbjct: 175 IGVSEILSVASTAQSFTGSAAP-LTMGAIAYVIVFLPLVVLTRLLERRFAWK 225


>gi|241762910|ref|ZP_04760973.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
 gi|241368085|gb|EER62290.1| polar amino acid ABC transporter, inner membrane subunit
           [Acidovorax delafieldii 2AN]
          Length = 250

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 7/202 (3%)

Query: 193 SFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLG 252
           S + G+ L+   T   R +  +  +AL        +    PTLV +   + +        
Sbjct: 51  SLLAGVALASLLTS-GRAWLARPARAL------VEVTRNTPTLVQLYCAFLVLNMLITQQ 103

Query: 253 QFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
             ++  G+     F+ + + +S +   F AE +R+G+ AVP   +EAA +LG + R+   
Sbjct: 104 LRDWGAGNNPLTPFVWVVVVVSLHKGVFHAEALRAGIEAVPATTLEAARSLGFSQRQLLT 163

Query: 313 LVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMF 372
            V LP A+R  +P L +  ++L+K +++A A+   D+      I +Q    +E++L+ + 
Sbjct: 164 RVQLPLAVRFALPSLVNNLVDLVKMTAVASAIAVGDVTYESIMIWSQRDNVLELLLLILL 223

Query: 373 IYLSLSIMIALFMNRLNAKIAL 394
            +  L+ +++L    L   + +
Sbjct: 224 WFGLLTWLVSLAGRWLEHHLRM 245



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%)

Query: 87  TAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIF 146
            A + G   T  LA   +  + + G  + +   S    +A   R  VEV RN P LV ++
Sbjct: 31  QAFVRGLGVTVQLALLTIPGSLLAGVALASLLTSGRAWLARPARALVEVTRNTPTLVQLY 90

Query: 147 FLYKSVLSVLPIPDHSI 163
             +  +  ++       
Sbjct: 91  CAFLVLNMLITQQLRDW 107


>gi|326803650|ref|YP_004321468.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650674|gb|AEA00857.1| ABC transporter, permease protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 229

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/223 (21%), Positives = 87/223 (39%), Gaps = 6/223 (2%)

Query: 174 RGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL----YISTFLI 229
               F   T   + K    +  + +V  LF+   +  F     + LP++     +   +I
Sbjct: 1   MNWDFIIDTFFASLKGIPVTLSIMLVAVLFSIAPALLFALALQRELPVISKFIQVYLAII 60

Query: 230 FGLPTLVLIALKYQL--HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
              P +VLI   Y L            +           +  YI       A + EI RS
Sbjct: 61  RATPLIVLILFFYSLLPSLLNQFTNLIHVEVDVFNFNPIIYAYIIFCLIALASLTEIFRS 120

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
            L+AV  GQ EAA++ GL+  K+   ++ PQ ++  +P   +  + L+K +SL   +   
Sbjct: 121 ALMAVDYGQWEAALSAGLSPWKSFERIIFPQLLKVALPSFINLIIELVKGTSLVFVMTVQ 180

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
           D+ ++  T    +       ++   IYL L  +I      +N 
Sbjct: 181 DITAIAKTAAAYSYNFTSAYIVIFVIYLILCGLIQYLGQVINK 223


>gi|160901201|ref|YP_001566783.1| polar amino acid ABC transporter inner membrane protein [Delftia
           acidovorans SPH-1]
 gi|160366785|gb|ABX38398.1| polar amino acid ABC transporter, inner membrane subunit [Delftia
           acidovorans SPH-1]
          Length = 249

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 83/165 (50%)

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
              PTLV +   + +          ++  G+     F+ + I +S +   F AE +R+G+
Sbjct: 80  RNTPTLVQLYCAFLVLNMLITQQLRDWGAGNNPLTPFVWVVIVVSLHKGVFHAEALRAGI 139

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
            AVP   +EAA +LG + R+    V LP A+R  +P LT+  ++L+K +++A A+   D+
Sbjct: 140 EAVPATTLEAARSLGFSQRQLLVRVQLPLAVRFALPSLTNNLVDLVKMTAVASAIAVGDV 199

Query: 350 VSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
                 I +Q    +E++L+ +  +  L+ +++L    L   + +
Sbjct: 200 TYESIMIWSQRDNVLELLLLILLWFGLLTWLVSLAGRWLEQHLRM 244


>gi|222082603|ref|YP_002541968.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
 gi|221727282|gb|ACM30371.1| amino acid ABC transporter [Agrobacterium radiobacter K84]
          Length = 249

 Score = 98.1 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 103/247 (41%), Gaps = 9/247 (3%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
           L ++ +                +           T+     +   S   G++ +   T  
Sbjct: 5   LLQAFIDWTGKIGLHYEFLSSGYEAQIWRGGFITTLYLIVLLIPVSLAFGLLFAAMLTS- 63

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           SR       +A         +    PTLV +   + L  +  V         + +SP F 
Sbjct: 64  SRKLVSAPVRAF------IEITRNTPTLVQLMFSF-LVLNTLVSNILGGAQNNPLSPFFW 116

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            +   +  + AA  A+ +R+G+ AVP   +EAA A+G +  +  R V  P A+R+ +P L
Sbjct: 117 -VVAVVGLHVAALHADAIRAGIEAVPEQTVEAARAIGFSRLQILRFVEAPLAIRASLPAL 175

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  +NL+K +++  A+  +++      +  Q    +E++++ +  + ++++ +A   + 
Sbjct: 176 VNNLINLVKLTTVGNAIAVSEITYASIMVWTQRDNVVELMIVILLFFSAINLAVARIGHW 235

Query: 388 LNAKIAL 394
           +  ++A+
Sbjct: 236 VEKRLAV 242



 Score = 36.1 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 34/76 (44%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
             + S    A     GF+ T +L    +  +   G L  A   S+ KLV+   R ++E+ 
Sbjct: 20  YEFLSSGYEAQIWRGGFITTLYLIVLLIPVSLAFGLLFAAMLTSSRKLVSAPVRAFIEIT 79

Query: 137 RNIPPLVVIFFLYKSV 152
           RN P LV + F +  +
Sbjct: 80  RNTPTLVQLMFSFLVL 95


>gi|218506830|ref|ZP_03504708.1| polar amino acid ABC transporter, inner membrane subunit [Rhizobium
           etli Brasil 5]
          Length = 116

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/96 (36%), Positives = 56/96 (58%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
            F +  +AL+ + ++ + EIVR  L A+P+GQ EAA A+GLT  +    VL PQAMR  +
Sbjct: 21  PFSAGVLALAIFCSSHVGEIVRGALQAIPKGQTEAAKAIGLTFTQTFTSVLWPQAMRQCL 80

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
           P   +    ++K S+L   +G A+L+     II++ 
Sbjct: 81  PAWVNTAAEMVKASTLLSVIGVAELLLRTQEIISRN 116


>gi|145593975|ref|YP_001158272.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora tropica CNB-440]
 gi|145303312|gb|ABP53894.1| polar amino acid ABC transporter, inner membrane subunit
           [Salinispora tropica CNB-440]
          Length = 320

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 109/217 (50%), Gaps = 8/217 (3%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEK-TGKALPLLYISTFLIFGLPTLVLIALKYQLH 245
           A   V S V+G +L++   +L      + TG A PL Y+   L   L  +  + +  ++ 
Sbjct: 84  ALAIVTSLVVGTLLAVLRIQLKSLAQRRYTGLAAPLAYLLRGLNRTLSAVTRVCV--EVF 141

Query: 246 FDKPVLGQFNFI-----GGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAA 300
              PV+    F+                L I L+ Y +  IAEI+RSG+  +  GQ EAA
Sbjct: 142 RGLPVVITIFFVARGFPEFGVTFNSLWYLVIGLTIYNSVVIAEILRSGMQGLAGGQAEAA 201

Query: 301 IALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQT 360
            A+GL+  + TR++LLPQA R ++P L SQ + +LK++SL   + + + +++G  II   
Sbjct: 202 AAIGLSPLQTTRMILLPQAFRIMLPALISQLVVVLKDTSLGFIISYEETLNIGKQIIGVL 261

Query: 361 GQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEK 397
              I++  +   ++++++  ++     +  +++   +
Sbjct: 262 DNPIQVYTVLAVLFIAVNYSLSKLAQAVQQRLSRGRR 298



 Score = 37.2 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 22/107 (20%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKL----------------------VA 126
           + VG  NT   A   ++ + ++GTL+   R+    L                      ++
Sbjct: 72  LGVGIKNTLTAAALAIVTSLVVGTLLAVLRIQLKSLAQRRYTGLAAPLAYLLRGLNRTLS 131

Query: 127 WICRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
            + RV VEVFR +P ++ IFF+ +         +    L  G+ + N
Sbjct: 132 AVTRVCVEVFRGLPVVITIFFVARGFPEFGVTFNSLWYLVIGLTIYN 178


>gi|209518288|ref|ZP_03267114.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
 gi|209501308|gb|EEA01338.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. H160]
          Length = 249

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 1/165 (0%)

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
           L    PTLV +   + +          +    +   P F  + + LS +  AF AE +R+
Sbjct: 79  LTRNTPTLVQLYCAFLVLNMLISQWLRDSHLDNPFKPFFW-VVLVLSLHKGAFHAEALRA 137

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           G  A+P   +E A +LG         + LP A R+ +P L + ++ L+K ++LA A+   
Sbjct: 138 GFDALPVQTLEGAASLGFDRATRFWRIELPLAFRTALPALVNNFVELVKATALASAIAVG 197

Query: 348 DLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           DL      I  Q    + ++++ +  +  L+ +++     L  ++
Sbjct: 198 DLTYQSIMIWTQRDNVLALMVLILLFFGLLTWLVSRAGRWLEKRL 242


>gi|322380677|ref|ZP_08054822.1| glutamine ABC transporter, permease protein [Helicobacter suis HS5]
 gi|321146887|gb|EFX41642.1| glutamine ABC transporter, permease protein [Helicobacter suis HS5]
          Length = 235

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 90/238 (37%), Gaps = 18/238 (7%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
               ++     L    L+     + T   I + S V+ I+  L    +   F  K+ + L
Sbjct: 3   QEKNMVEGLFLLEPDNLARLFEGLKTTLFIALLSIVISIIGGLLMGVVMA-FCTKSIRFL 61

Query: 220 PLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAA 279
             LY+ +  I       L+   + ++F        +           ++     S +  A
Sbjct: 62  CHLYLESVRIIP-----LLVWLFVVYFGLSAWFNLHISAE-------VASVAVFSVWGIA 109

Query: 280 FIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSS 339
            + ++ R  L ++   Q  +A ALGL   + T  +L PQA  +++P   + +  ++K +S
Sbjct: 110 EMMDLTRGALTSISPHQTYSAKALGLKPMQITFFILFPQAFLALLPSSVNLFTRMIKTTS 169

Query: 340 LAVAVGFADLVSVGGTIINQT-----GQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
           L   +G  DL+ VG  +I          +  +      +Y  L   ++     L  KI
Sbjct: 170 LVSLIGTIDLLKVGQQMIEVNLFKMPHASFYVYGWIFVVYFMLCYPLSCLSKWLEKKI 227



 Score = 41.9 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 39/85 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +  G   T ++A   ++ + I G L+G       K + ++C +Y+E  R IP LV +F +
Sbjct: 22  LFEGLKTTLFIALLSIVISIIGGLLMGVVMAFCTKSIRFLCHLYLESVRIIPLLVWLFVV 81

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNN 173
           Y  + +   +   + V    +F   
Sbjct: 82  YFGLSAWFNLHISAEVASVAVFSVW 106


>gi|329298276|ref|ZP_08255612.1| polar amino acid ABC transporter, inner membrane subunit [Plautia
           stali symbiont]
          Length = 122

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 54/97 (55%)

Query: 302 ALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG 361
           ALG+TH +  R ++LPQA R ++PP+ +Q +++LK+S+L   +   +L+ V     + + 
Sbjct: 2   ALGMTHAQIMRKIVLPQAARIVLPPMGNQMISMLKSSALVSVIVVQELLLVANQTASASF 61

Query: 362 QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
           +  E +      YL L+ +  LF + L   +  K ++
Sbjct: 62  RYFEALCAAGLYYLLLTSLFMLFQSWLERTLDPKLRR 98


>gi|330901550|gb|EGH32969.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 221

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 88/205 (42%), Gaps = 14/205 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +    ++ + + +  + +++    ++     K      L+ +
Sbjct: 1   MTFDYAFAISTLPAFLKAVGVTLQVGLIAILTSLTVAVVNAAIATF---KVPVLHRLVPV 57

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P L+ +   Y           F           F S  IA++    A++ EI
Sbjct: 58  YVELARNTPLLIQLFFIY-----------FALPTLGIRVSGFASAVIAMTFLGGAYLTEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++  AV
Sbjct: 107 LRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILI 369
              +++    + I    +  E++ +
Sbjct: 167 AVPEILYTTKSYIALYYKTYEMLAV 191



 Score = 41.1 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    S   A L     T  +    ++ +  +  +  A       ++  +  VYVE+ R
Sbjct: 4   DYAFAISTLPAFLKAVGVTLQVGLIAILTSLTVAVVNAAIATFKVPVLHRLVPVYVELAR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           N P L+ +FF+Y ++ ++   
Sbjct: 64  NTPLLIQLFFIYFALPTLGIR 84


>gi|291456586|ref|ZP_06595976.1| amino acid ABC transporter, permease protein [Bifidobacterium breve
           DSM 20213]
 gi|291381863|gb|EFE89381.1| amino acid ABC transporter, permease protein [Bifidobacterium breve
           DSM 20213]
          Length = 235

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 18/212 (8%)

Query: 185 TNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQL 244
           T+  +   + ++GI L +    L R       +A+  LY+  F I  +PTLVL+ L Y +
Sbjct: 30  TSITVAGLALLVGIPLGIILGAL-RILRNPVLRAVLRLYLEFFRI--VPTLVLLFLTYYI 86

Query: 245 HFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALG 304
                                     +    + AA I++IVR  LI+V   Q++A  ALG
Sbjct: 87  ----------LPRELGVQVDGVTVAVVTFGLWVAAEISDIVRGSLISVSDHQVDAGKALG 136

Query: 305 LTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ-- 362
           +   +    V +PQ++  ++P   +    ++  +SL + +   D+++VG  I+       
Sbjct: 137 MNGLQVLWYVRIPQSINLMVPATINLAARVIMTTSLLLLISVIDVITVGQQIMEANRMTH 196

Query: 363 ---AIEIILIWMFIYLSLSIMIALFMNRLNAK 391
              A  +      +Y  +   +A+    L  +
Sbjct: 197 PDAAFWVYGFIFLLYFIICWPLAMIAKALEKR 228



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 81/201 (40%), Gaps = 9/201 (4%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G   +  +A   ++    +G ++GA R+  N ++  + R+Y+E FR +P LV++F  
Sbjct: 24  LLGGLGTSITVAGLALLVGIPLGIILGALRILRNPVLRAVLRLYLEFFRIVPTLVLLFLT 83

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLS 208
           Y  +   L +    + +    F          +   +   +       G  L +    L 
Sbjct: 84  YYILPRELGVQVDGVTVAVVTFGLWVAAEISDIVRGSLISVSDHQVDAGKALGM--NGLQ 141

Query: 209 RHFHEKTGKALPLLYISTF-----LIFGLPTLVLIALKYQLHFDKPVL--GQFNFIGGST 261
             ++ +  +++ L+  +T      +I     L+LI++   +   + ++   +      + 
Sbjct: 142 VLWYVRIPQSINLMVPATINLAARVIMTTSLLLLISVIDVITVGQQIMEANRMTHPDAAF 201

Query: 262 VSPEFMSLYIALSCYTAAFIA 282
               F+ L   + C+  A IA
Sbjct: 202 WVYGFIFLLYFIICWPLAMIA 222


>gi|153841388|ref|ZP_01993400.1| 1-(5-phosphoribosyl)-5-[(5-
           phosphoribosylamino)methylideneamino]imidazole-4-
           carboxamide isomerase [Vibrio parahaemolyticus AQ3810]
 gi|149745487|gb|EDM56734.1| 1-(5-phosphoribosyl)-5-[(5-
           phosphoribosylamino)methylideneamino]imidazole-4-
           carboxamide isomerase [Vibrio parahaemolyticus AQ3810]
          Length = 338

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/121 (41%), Positives = 74/121 (61%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
           + + + +FV+G++ ++  +  +R+    TG+  P+  I   L+ GLP LV       +  
Sbjct: 217 SGVVIAAFVIGLIATISISIWARNKQRLTGQQTPMGRIGLGLLVGLPLLVYFVSGMPISL 276

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
           + P L  FNF GG ++ PE  +L +ALS YTAAFIAEIVRSG+ AV  GQ EAA++LGL 
Sbjct: 277 EYPELKGFNFKGGISIIPELAALLLALSVYTAAFIAEIVRSGINAVSHGQTEAAMSLGLP 336

Query: 307 H 307
            
Sbjct: 337 R 337


>gi|320184058|gb|EFW58878.1| Putative amino-acid ABC transporter permease protein yhdX [Shigella
           flexneri CDC 796-83]
          Length = 122

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/117 (43%), Positives = 70/117 (59%)

Query: 196 LGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFN 255
           + IVLS+   R ++ +  KTG+       +  LI GLP L        LH+D P L  FN
Sbjct: 1   MAIVLSVGLFRFNKTYQIKTGQLRRTWPFAAVLIIGLPLLAQWLFGAALHWDVPALRGFN 60

Query: 256 FIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATR 312
           F GG  + PE  +L +ALS YT+AFIAEI+R+G+ AVP GQ EAA +LGL + ++  
Sbjct: 61  FRGGMVLIPELAALTLALSVYTSAFIAEIIRAGIQAVPYGQHEAARSLGLRYARSLF 117


>gi|224418906|ref|ZP_03656912.1| ABC transporter membrane-spanning permease - glutamine transport
           [Helicobacter canadensis MIT 98-5491]
 gi|253827859|ref|ZP_04870744.1| glutamine ABC transporter permease GlnP [Helicobacter canadensis
           MIT 98-5491]
 gi|313142420|ref|ZP_07804613.1| polar amino acid ABC transporter [Helicobacter canadensis MIT
           98-5491]
 gi|253511265|gb|EES89924.1| glutamine ABC transporter permease GlnP [Helicobacter canadensis
           MIT 98-5491]
 gi|313131451|gb|EFR49068.1| polar amino acid ABC transporter [Helicobacter canadensis MIT
           98-5491]
          Length = 222

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 14/234 (5%)

Query: 162 SIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPL 221
              L   +      +      +     +  F  V  I+L  F   L + +  +   AL  
Sbjct: 1   MTALYLDLDFIQNAIPVFGKALWLTLHLSFFGIVFSILLGFFI-ALVQFYKVRFLSALCQ 59

Query: 222 LYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFI 281
            YI   L    P L+ +   Y                       +    I +     +++
Sbjct: 60  AYIE--LSRNTPLLIQLFFLYY-----------GLPQVGLQLTSYTCALIGVIFLGGSYM 106

Query: 282 AEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLA 341
           AE  R+GL +V R Q+E+  +LGL+  +    V+LPQ++   +P + +  + LLK +S+ 
Sbjct: 107 AESFRAGLESVGRIQLESGRSLGLSEMQLMFYVVLPQSLAVSLPFIGANAIFLLKETSVV 166

Query: 342 VAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
            A+  AD++ +   +I    +  E +L+ +  YL + + ++     L      K
Sbjct: 167 SAIALADILYITKDLIGSYYKTNETLLLLVLCYLVVLLPLSFLFLALEKYYKRK 220



 Score = 47.6 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 35/68 (51%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFF 147
                   T  L+F G++ + ++G  +   +    + ++ +C+ Y+E+ RN P L+ +FF
Sbjct: 17  VFGKALWLTLHLSFFGIVFSILLGFFIALVQFYKVRFLSALCQAYIELSRNTPLLIQLFF 76

Query: 148 LYKSVLSV 155
           LY  +  V
Sbjct: 77  LYYGLPQV 84


>gi|91781144|ref|YP_556351.1| polar amino acid ABC transporter inner membrane protein
           [Burkholderia xenovorans LB400]
 gi|91693804|gb|ABE37001.1| amino acid ABC transporter membrane protein 1, PAAT family
           [Burkholderia xenovorans LB400]
          Length = 247

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 3/226 (1%)

Query: 167 FGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYIST 226
              FL +     P L     +   V S + G  L+     L+     +        ++  
Sbjct: 18  DFRFLLDAYERVPFLQGIVVSIGIVVSTMCGSALAGLLLLLALRGRNRWSAGAARAFVEL 77

Query: 227 FLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVR 286
                 PTLV +   + L  +  +               F  + + LS +  AF AE +R
Sbjct: 78  T--RNTPTLVQLYCAF-LVLNMLITQWLRESHLDNPFKPFFWVVLVLSLHKGAFHAEALR 134

Query: 287 SGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGF 346
           +G  A+P   +E A ALG         + LP A R+ +P L + ++ L+K S+LA A+  
Sbjct: 135 AGFDALPAQTLEGAAALGFDRATRFWRIELPLAFRTALPALVNNFVELVKASALASAIAV 194

Query: 347 ADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKI 392
            D+      I  Q    + ++++ +  +  L+ +++L    L  ++
Sbjct: 195 GDITYQSIMIWTQRDNVLALMILILAFFGLLTWLVSLAGRWLERRL 240


>gi|295698919|ref|YP_003606812.1| polar amino acid ABC transporter inner membrane subunit
           [Burkholderia sp. CCGE1002]
 gi|295438132|gb|ADG17301.1| polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia sp. CCGE1002]
          Length = 245

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 13/207 (6%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLY-----ISTFLIFGLPTLVLIALKYQLH 245
           +    L +V+S+ +  LS       G AL +         T L+     + ++ L +   
Sbjct: 23  LGGAALTVVMSMVSALLSALVGLAGGIALSMTRGAAHLALTALVGFFRAIPVLMLIFWTF 82

Query: 246 FDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGL 305
           F  P+L   +        P   ++  AL+    A+++  V++G+ AV  GQ +AA +LG+
Sbjct: 83  FLMPILLHIDV-------PGLATVVCALALIGGAYLSHSVQAGIAAVGAGQAQAAASLGM 135

Query: 306 THRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAI 364
           T  +A R V LPQA+R ++P   +Q++ L+K++SLA  VG  +   +   + N+     +
Sbjct: 136 TRWQALRYVQLPQAIRIMMPSFVNQWVTLIKDTSLAYIVGVPEFTFLANQVNNRLMVYPV 195

Query: 365 EIILIWMFIYLSLSIMIALFMNRLNAK 391
           +I L    +YL L   +      L   
Sbjct: 196 QIFLFVGVVYLLLCSTLQYGATWLLKH 222


>gi|197294508|ref|YP_001799049.1| Amino acid ABC transporter permease component [Candidatus
           Phytoplasma australiense]
 gi|171853835|emb|CAM11784.1| Amino acid ABC transporter permease component [Candidatus
           Phytoplasma australiense]
          Length = 579

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 73/177 (41%)

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
           +  F     K    L    F  F    +++  L +           F+     T    F+
Sbjct: 394 ANKFLSYIKKTAAFLIDCAFGFFQAVPVLIQGLLFYFLILIITKKHFHIDFFITNEGIFV 453

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
                +   TA F+A  + + +  +  GQ+E ++ALG+  ++  R ++  Q+++   P +
Sbjct: 454 ISLTVIILNTAVFLASTMLNHIKFLDSGQIEGSVALGMKPKQVFRYIIFSQSIKRTYPSI 513

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
            SQ++  +K+++L  ++G A ++      I   G  I   L    IY+ L +   L 
Sbjct: 514 WSQFIVNIKDTALFSSIGLAGVIWQAKRNIATNGDTITPYLTISIIYIILVLSTNLI 570


>gi|149202784|ref|ZP_01879756.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
 gi|149144066|gb|EDM32100.1| His/Glu/Gln/Arg/opine family ABC transporter, permease protein
           [Roseovarius sp. TM1035]
          Length = 268

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 87/218 (39%), Gaps = 17/218 (7%)

Query: 191 VFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPV 250
            F+ + G +L+  A  L +    +  + L   +I  F+  G P  +     Y        
Sbjct: 48  FFALISGFILAT-AVALGKGSRNRVIRKLSEWFI--FVFRGSPLFIQFFFAYFFFLSLKS 104

Query: 251 LGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKA 310
           +  F  I    ++  ++   I L   TAA+  EI    L ++P+G +EAA A G +    
Sbjct: 105 VSPFFDI----LTSAWLGALIVLFLNTAAYSGEIFYGALRSIPKGDVEAADAYGFSGWPR 160

Query: 311 TRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA------DLVSVGGTIINQTGQAI 364
            R ++ P  +R   P  T++ + L   ++L    GF       D +       ++T    
Sbjct: 161 FRRIIWPTMLRLAWPAYTNEAIFLFHATTLVFFSGFPVWQQRGDALYYAKYFADKTFNPF 220

Query: 365 EIILIWMFIYLSLSIMI----ALFMNRLNAKIALKEKK 398
               I    ++ L++++     L   RLN  +  + ++
Sbjct: 221 VPYPILAGYFILLTLVVIGVFGLINRRLNRHLPQEYRR 258


>gi|42519235|ref|NP_965165.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
 gi|41583523|gb|AAS09131.1| ABC transporter permease component [Lactobacillus johnsonii NCC
           533]
          Length = 219

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L            +     +  +V+ L    L ++FH      +   Y+   L    
Sbjct: 7   QQSLPQFVKGFQVTVWMSFVGIIGAMVVGL-CCSLIQYFHVPVIDKIVSAYVE--LARNT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y             F              I L     A++AE    G   +
Sbjct: 64  PLLIQLFFLYY-----------AFPVIGLKMSAITCGLIGLIFLGGAYMAEAFTGGFDGI 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q+E+  A+G++  +  R V+ PQ     +P + +  + L+K +S+   +   +L + 
Sbjct: 113 SKNQIESGEAIGMSKWQLARYVVFPQGFALSVPAIAANIIFLIKETSIFSVIAIPELTNT 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +I     + E + + +  Y  + I ++L +  L  ++ 
Sbjct: 173 ALDLIGLYYHSNEYLFVLVIAYAIILIPLSLLLTWLERRVR 213



 Score = 46.1 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GF  T W++F G+I A ++G      +     ++  I   YVE+ RN P L+ +FFL
Sbjct: 13  FVKGFQVTVWMSFVGIIGAMVVGLCCSLIQYFHVPVIDKIVSAYVELARNTPLLIQLFFL 72

Query: 149 YKSVL 153
           Y +  
Sbjct: 73  YYAFP 77


>gi|295100981|emb|CBK98526.1| amine acid ABC transporter, permease protein, 3-TM region,
           His/Glu/Gln/Arg/opine family [Faecalibacterium
           prausnitzii L2-6]
          Length = 257

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 14/216 (6%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               +   ++G +L+L  T   +    +        YI  F        + I + +    
Sbjct: 32  VLGVIMGLIVGSLLALART-YCKKGPARILGWFAAAYIELFRNTPYLLWIFICVVFCPCP 90

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                  F     S          +AL  + ++ IAEIVR GL  V +GQ EA  A G  
Sbjct: 91  GFFARKMFGLT--SVEMKLLFKAALALILFNSSVIAEIVRGGLNGVSKGQFEAGYAQGFN 148

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQA--- 363
             +    ++LPQA R+I+P L SQ +  +K+SS    V   +L++    +++  G     
Sbjct: 149 TAEVLLYIVLPQAYRNIVPTLLSQVITTIKDSSYLANVATIELMARIRQLLSAAGTYNGL 208

Query: 364 --------IEIILIWMFIYLSLSIMIALFMNRLNAK 391
                   + +      IY  ++  ++  +  +  +
Sbjct: 209 GTVNVSDVMVLFGTACVIYFIINFTLSCVVRAMQNR 244



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 88  AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLS----ANKLVAWICRVYVEVFRNIPPLV 143
            +L G   T  ++  G+I   I+G+L+   R        +++ W    Y+E+FRN P L+
Sbjct: 19  YLLRGVAFTCIISVLGVIMGLIVGSLLALARTYCKKGPARILGWFAAAYIELFRNTPYLL 78

Query: 144 VIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVL 196
            IF          P P       FG+      L F            V + ++
Sbjct: 79  WIFICVV----FCPCPGFFARKMFGLTSVEMKLLFKAALALILFNSSVIAEIV 127


>gi|271963749|ref|YP_003337945.1| amino acid ABC transporter permease [Streptosporangium roseum DSM
           43021]
 gi|270506924|gb|ACZ85202.1| ABC-type amino acid transport system permease component-like
           protein [Streptosporangium roseum DSM 43021]
          Length = 312

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 21/171 (12%)

Query: 192 FSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVL 251
           F FV GI       RLS H   +             ++     + L+ + + + +     
Sbjct: 103 FGFVFGI------GRLSDHAWIRVPAG--------AVVEFFRAIPLLIMIFAVMYGG--- 145

Query: 252 GQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKAT 311
              + + G TV+P FM++   L  Y  + +AEIVR+G++++PRGQ EAA+A+GL   +  
Sbjct: 146 ---SAVFGLTVTP-FMAVVTGLVLYNGSVLAEIVRAGILSIPRGQSEAALAIGLRKGQVM 201

Query: 312 RLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           R++LLPQ + +++P + +Q + LLK+++L   V F DL++ G  ++     
Sbjct: 202 RMILLPQGVTAMMPAIVAQLVVLLKDTALGFIVSFEDLLNAGARVLPSNFN 252



 Score = 54.6 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 34/81 (41%)

Query: 76  IVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEV 135
             P+     +   IL G  NT   A    + A   G + G GRLS +  +       VE 
Sbjct: 69  WTPFLRGDVWINLILPGLFNTLSAAAVAALIAVPFGFVFGIGRLSDHAWIRVPAGAVVEF 128

Query: 136 FRNIPPLVVIFFLYKSVLSVL 156
           FR IP L++IF +     +V 
Sbjct: 129 FRAIPLLIMIFAVMYGGSAVF 149


>gi|330821192|ref|YP_004350054.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Burkholderia gladioli BSR3]
 gi|327373187|gb|AEA64542.1| glutamine ABC superfamily ATP binding cassette transporter,
           membrane protein [Burkholderia gladioli BSR3]
          Length = 223

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 19/219 (8%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
               LS   +T+  +  + V    LG+VL+L      R    +    L + Y+  FL   
Sbjct: 18  WPMILSGFGITVLVSVLVIVLGVTLGLVLALV-----RAMQVRVLDVLIVAYVD-FLRTM 71

Query: 232 LPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIA 291
              +VL+ + + L +    L                +  + L    +AF  EI  S + A
Sbjct: 72  PQLVVLVLVYFGLPYAGLRL------------SPLATTVLGLGAVLSAFACEIFWSSIQA 119

Query: 292 VPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVS 351
           +PRGQ EAA+ALG    +    ++LPQA+R  IP LT++ + + K  +L  AV   +++ 
Sbjct: 120 LPRGQSEAALALGFGRWRTLFEIILPQAIRMSIPLLTNRAIAVSKGVALGTAVALPEVLG 179

Query: 352 VGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
              +++         + +    YLSL I + +    L  
Sbjct: 180 QAQSLVGILANP-SPLTMAALCYLSLFIPLVVLSRWLER 217


>gi|251788811|ref|YP_003003532.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537432|gb|ACT06053.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 222

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 84/226 (37%), Gaps = 9/226 (3%)

Query: 172 NNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFG 231
            N         +       V +F L  ++SL            +  + P +   T +   
Sbjct: 5   WNNFYHDLMEQLPLVLNGIVGTFKLAAIVSLSGFLWGIVIFFLSISSQPAIKHLTKIYMD 64

Query: 232 LPT-LVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLI 290
                 LI + + +++  P                F       +    A+ A  + +   
Sbjct: 65  FFIGTPLILILFVIYYGLPQT--------GIHLSPFTVAVSGFTLNVGAYNAAYMTTAYN 116

Query: 291 AVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLV 350
           A+ + + EAA+  G +  +  RL++LPQ + + +P LT+Q +N +K+S++A  + + +  
Sbjct: 117 ALNKHETEAAVVQGFSSWQIFRLIILPQVLITSVPALTNQVINNIKDSTIAFLIQYTEFF 176

Query: 351 SVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           S    + +   +     L    +YL     I +    +  K+ + E
Sbjct: 177 SRIQEVASTNFEFFNAYLFAALVYLVFITFIVILSRVIERKLGIAE 222


>gi|329667255|gb|AEB93203.1| ABC transporter permease component [Lactobacillus johnsonii DPC
           6026]
          Length = 219

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L            +     +  +V+ L    L ++FH      +   Y+   L    
Sbjct: 7   QQSLPQFVKGFQVTVWMSFVGIIGAMVVGL-CCSLIQYFHVPVIDKIVSAYVE--LARNT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y             F              I L     A++AE    G   +
Sbjct: 64  PLLIQLFFLYY-----------AFPVIGLKMSAITCGLIGLVFLGGAYMAEGFTGGFDGI 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q+E+  A+G++  +  R V+ PQ     +P + +  + L+K +S+   +   +L + 
Sbjct: 113 SKNQIESGEAIGMSKWQLARYVVFPQGFALSVPAIAANIIFLIKETSIFSVIAIPELTNT 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +I     + E + + +  Y  + I ++L +  L  ++ 
Sbjct: 173 ALDLIGLYYHSNEYLFVLVIAYAIILIPLSLLLTWLERRVR 213



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GF  T W++F G+I A ++G      +     ++  I   YVE+ RN P L+ +FFL
Sbjct: 13  FVKGFQVTVWMSFVGIIGAMVVGLCCSLIQYFHVPVIDKIVSAYVELARNTPLLIQLFFL 72

Query: 149 YKSVL 153
           Y +  
Sbjct: 73  YYAFP 77


>gi|209543095|ref|YP_002275324.1| polar amino acid ABC transporter inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530772|gb|ACI50709.1| polar amino acid ABC transporter, inner membrane subunit
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 217

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 65/127 (51%)

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
              A+      +IAEIV  GL +VP  Q+EAA+ L L      R V++PQA+  I+PP  
Sbjct: 91  AIWAIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIVPQALPVIVPPAV 150

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRL 388
              +  +K+++LA  VG  +L   G  + N+    I++ L  + +Y +LS  +      L
Sbjct: 151 GYLVLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFALSYPLTRLSRML 210

Query: 389 NAKIALK 395
             ++AL 
Sbjct: 211 EKRLALS 217


>gi|258646475|ref|ZP_05733944.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
 gi|260403883|gb|EEW97430.1| amino acid ABC transporter, permease protein [Dialister invisus DSM
           15470]
          Length = 232

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 13/238 (5%)

Query: 163 IVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLL 222
               F + +  R +S    T++      +     G ++++           +  +   L 
Sbjct: 4   FDPSFFIGVFPRLISALPFTVEVIIASILLCLFFGTIIAVI----------RIARVPVLA 53

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
                 +    ++  I   Y ++F  P + +   I      P  + + ++L+ + A  I+
Sbjct: 54  PFCDIWLSYNRSMPFILDLYLVYFCLPAIIRGLGI-NPDGWPLTVYVLVSLTFHYAPVIS 112

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           EI+R   ++V RGQ EAAI  GL+  +    ++ PQA+   IP L S+ +N+LK++S+  
Sbjct: 113 EILRPAYLSVDRGQHEAAIVFGLSPVRRVFSIIAPQALPIAIPGLVSESINILKDTSIMF 172

Query: 343 AVGFADLVSVGGTIINQTG--QAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKEKK 398
            +G  DL+     IIN       +E       IY ++ I I         +   + ++
Sbjct: 173 FIGVIDLMGRANLIINAAFGQHRLETYTAVALIYWAIVIAIEAAFWLFQKQGHKEIRR 230


>gi|330967850|gb|EGH68110.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 221

 Score = 97.3 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 89/205 (43%), Gaps = 14/205 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +    ++ + + +  + +++    ++  F       L  +Y+
Sbjct: 1   MTFDYAFALSTLPAFLKAVGVTLQVGLIAILTSLTVAIVNAAIA-MFRVPVLHRLVPVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P L+ +   Y           F           F S  IA++    A++ EI
Sbjct: 60  E--LARNTPLLIQLFFIY-----------FALPTMGIRVSGFASAVIAMTFLGGAYLTEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++  AV
Sbjct: 107 LRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILI 369
              +++    + I    +  E++ +
Sbjct: 167 AVPEILYTTKSYIALYYKTYEMLAV 191



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 35/81 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    S   A L     T  +    ++ +  +  +  A  +    ++  +  VYVE+ R
Sbjct: 4   DYAFALSTLPAFLKAVGVTLQVGLIAILTSLTVAIVNAAIAMFRVPVLHRLVPVYVELAR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           N P L+ +FF+Y ++ ++   
Sbjct: 64  NTPLLIQLFFIYFALPTMGIR 84


>gi|262042354|ref|ZP_06015516.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259040262|gb|EEW41371.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 202

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 18/201 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +   GI L+  A R         G    LL++   +I G+P   LI + + L +
Sbjct: 9   IGATLLALPGGIALAGLAWRYG-------GLVRRLLFLWAEIIRGIP---LIFVIFWLWY 58

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P  +++ +AL+ +TAA +   V +GL ++P+GQ EAA+  G  
Sbjct: 59  LLPMLTGGDL-------PGAVTVTLALAWFTAASVMHSVLAGLQSLPKGQYEAALTQGFA 111

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
             +  RLVLLPQA+R++ P L   ++ LLK++SLA  V   +L +V G + N+     + 
Sbjct: 112 PGQTLRLVLLPQALRNVQPSLVGIFIGLLKDTSLAFIVNVPELTTVAGQVNNRVQIYPLA 171

Query: 366 IILIWMFIYLSLSIMIALFMN 386
           I +    +Y  L   ++L  +
Sbjct: 172 IFVFTGAVYYLLCCGLSLLAS 192


>gi|330861764|emb|CBX71938.1| hypothetical protein YEW_AJ02050 [Yersinia enterocolitica W22703]
          Length = 186

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 170 FLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLI 229
           +      +FP   +   A   + S + G+  ++  T L        G    +L       
Sbjct: 10  WTYLLWGTFPDGPLGGAALTLLISLLAGVASAILGTALGVALAMSRGVWAAVLAAVLGFF 69

Query: 230 FGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGL 289
             +P    I L +  +F  P++   +        PE  ++  AL+   +A++A  V++G+
Sbjct: 70  RAIPV---IMLIFWTYFLLPIVFGVDI-------PEITTVVCALALIASAYLAHAVKAGI 119

Query: 290 IAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADL 349
           +A+  GQ +A ++LG    +    V+LPQA+R ++P   +Q+++L+K++SLA  VG  +L
Sbjct: 120 VAIGAGQWQAGLSLGFNRWQVLWFVVLPQALRMMVPSFINQWISLIKDTSLAYIVGVNEL 179

Query: 350 VSVG 353
              G
Sbjct: 180 TFFG 183


>gi|297517323|ref|ZP_06935709.1| glutamate/aspartate transport system permease GltJ [Escherichia
           coli OP50]
          Length = 195

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 5/192 (2%)

Query: 160 DHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKAL 219
           +  I L    F N   L +          + + ++++  ++  F   L R    +    L
Sbjct: 6   NWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGIL-RTVPNRFLSGL 64

Query: 220 PLLYISTFLIFGLPTLVLIALKY-QLHFDKPVLGQFNFIGGSTVSPEF-MSLYIALSCYT 277
             LY+  F    +P +V     Y  +    P      F      + +F +S  + L  +T
Sbjct: 65  GTLYVELF--RNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFT 122

Query: 278 AAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKN 337
           AA + E VR+ + ++PRGQ  AA+A+GLT  +A R VLLP A R I+PP+TS+ +NL+KN
Sbjct: 123 AARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKN 182

Query: 338 SSLAVAVGFADL 349
           S++A  +G  D+
Sbjct: 183 SAIASTIGLVDM 194



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 39/80 (48%)

Query: 84  SYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLV 143
           +Y   I  GF  T  L+    I A ++G+  G  R   N+ ++ +  +YVE+FRN+P +V
Sbjct: 20  TYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIV 79

Query: 144 VIFFLYKSVLSVLPIPDHSI 163
             F  Y  +  +LP      
Sbjct: 80  QFFTWYLVIPELLPEKIGMW 99


>gi|283833319|ref|ZP_06353060.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Citrobacter youngae ATCC 29220]
 gi|291070957|gb|EFE09066.1| amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine
           family [Citrobacter youngae ATCC 29220]
          Length = 225

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 18/202 (8%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
               + +   GI L+  A R         G     L+I    I G+P   LI + + + +
Sbjct: 36  IGAALLALPGGIALACCAWRF-------PGAVRNGLFIWAGFIRGIP---LIFVIFWMWY 85

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P+L   +        P  +++ +AL+ +TAA +   V +G+ A+P GQ EAA+  G  
Sbjct: 86  LLPMLTGSDL-------PGAVTVTLALAWFTAASVMHSVYAGISALPGGQYEAAVVQGFH 138

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTG-QAIE 365
             +A RL+LLPQ +R+++P LT  ++ LLK++SLA  V   +L +V G + ++       
Sbjct: 139 PFQALRLILLPQVLRNVMPSLTGIFIGLLKDTSLAFIVNVPELTTVAGQVNSRVQIYPAA 198

Query: 366 IILIWMFIYLSLSIMIALFMNR 387
           I +    +Y  L   +     R
Sbjct: 199 IFIFTGLVYYLLCFSLEKITRR 220


>gi|159184744|ref|NP_354405.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
 gi|159140032|gb|AAK87190.2| ABC transporter, membrane spanning protein (amino acid)
           [Agrobacterium tumefaciens str. C58]
          Length = 234

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 84/193 (43%), Gaps = 14/193 (7%)

Query: 180 TLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIA 239
              +     +   + VLG ++++    + R     T +     Y+   L+   P LV + 
Sbjct: 18  WRGILLTIGLSATAIVLGTMIAVALVAM-RSLGNGTIRFCVDSYVE--LLRNTPFLVQLF 74

Query: 240 LKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEA 299
           + +   F  P++                +   A++   +A+  EI+R+G+ ++ R Q+EA
Sbjct: 75  MVF---FGLPLV--------GFRMSGTQAALFAMTLNLSAYATEIIRAGVESIHRSQVEA 123

Query: 300 AIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            ++L L+  +  R V++  A   I P L+SQ++ +L  SS+   +   +L      I  +
Sbjct: 124 GLSLSLSRLQVFRYVVMKPAFAKIWPALSSQFVLMLLASSICSFISVPELSGAASIIEQR 183

Query: 360 TGQAIEIILIWMF 372
           T ++ E  ++   
Sbjct: 184 TFRSFETYIVVTV 196



 Score = 40.7 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           I  G + T  L+ + ++  T+I   + A R   N  + +    YVE+ RN P LV +F +
Sbjct: 17  IWRGILLTIGLSATAIVLGTMIAVALVAMRSLGNGTIRFCVDSYVELLRNTPFLVQLFMV 76

Query: 149 YKSVLSVLPIPDHSIVLPFGMFLN 172
           +  +  V      +    F M LN
Sbjct: 77  FFGLPLVGFRMSGTQAALFAMTLN 100


>gi|302866036|ref|YP_003834673.1| polar amino acid ABC transporter inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315502595|ref|YP_004081482.1| polar amino acid abc transporter, inner membrane subunit
           [Micromonospora sp. L5]
 gi|302568895|gb|ADL45097.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora aurantiaca ATCC 27029]
 gi|315409214|gb|ADU07331.1| polar amino acid ABC transporter, inner membrane subunit
           [Micromonospora sp. L5]
          Length = 218

 Score = 96.9 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 14/214 (6%)

Query: 183 MDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKY 242
                K+F+ + V  +VL +    + R       +A    Y++      L TLV   L +
Sbjct: 19  FYNTVKLFLIAGVGSLVLGMLLGAM-RVSPVPALRAFGATYVNLVRNTPL-TLVFAFLVF 76

Query: 243 QLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIA 302
            +                     F S  IAL  YT+AFI E+VRSG+  V  GQ EAA A
Sbjct: 77  AVP------------KLDVNIDYFNSACIALIAYTSAFICEVVRSGVNTVATGQAEAARA 124

Query: 303 LGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQ 362
           LG+T  +   L++LPQA+R+++PP+ S  + +LKN+++A      +  ++   +  +   
Sbjct: 125 LGMTFAQVLTLIVLPQALRAMVPPMMSVLIAMLKNTTIAAGFSVLEAGAIPAYMSERGEP 184

Query: 363 AIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
              ++   +  +L L I + +    L  K A+  
Sbjct: 185 QFIVLTWIVIGFLILIIPLVVLQRILERKWAVAR 218



 Score = 43.4 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 33/73 (45%)

Query: 92  GFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKS 151
           GF NT  L     + + ++G L+GA R+S    +      YV + RN P  +V  FL  +
Sbjct: 18  GFYNTVKLFLIAGVGSLVLGMLLGAMRVSPVPALRAFGATYVNLVRNTPLTLVFAFLVFA 77

Query: 152 VLSVLPIPDHSIV 164
           V  +    D+   
Sbjct: 78  VPKLDVNIDYFNS 90


>gi|330985960|gb|EGH84063.1| amino acid ABC transporter permease [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 244

 Score = 96.9 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 11/247 (4%)

Query: 148 LYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRL 207
             +S +        +       +     L     T+       + S + G+ L+   T  
Sbjct: 4   WLESWVQWAASVGLNYTFLLDAYQRGTMLEGAVTTLWLCLFTIIGSLLTGVGLAAMLTS- 62

Query: 208 SRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFM 267
                 KT  A+P   +   +    PTLV +       F    +     +G +     F 
Sbjct: 63  -----GKTWLAVP-ARVFIEVTRNTPTLVQL----YCAFLVLNMLLTQAVGAANPLTPFA 112

Query: 268 SLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPL 327
            + I +S +  AF AE +R+G+ AVP   +EAA +L    R+    V LP A+R  +P L
Sbjct: 113 WVVIVISLHKGAFHAEALRAGIEAVPAVTLEAASSLAFNSRQLLWNVQLPLAVRFALPSL 172

Query: 328 TSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNR 387
            +  ++L+K +++A A+   D+      I  Q+   +E++++ +  +  LS  +      
Sbjct: 173 VNNLIDLVKMTAVASAIAVNDITYASIMIWTQSDNVLELMILLLSFFALLSFAVNCAGRA 232

Query: 388 LNAKIAL 394
           L A++ +
Sbjct: 233 LEARLRM 239



 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 83  SSYAT-AILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPP 141
            +Y    +L G V T WL    +I + + G  + A   S    +A   RV++EV RN P 
Sbjct: 24  DAYQRGTMLEGAVTTLWLCLFTIIGSLLTGVGLAAMLTSGKTWLAVPARVFIEVTRNTPT 83

Query: 142 LVVIFFLYKSV 152
           LV ++  +  +
Sbjct: 84  LVQLYCAFLVL 94


>gi|28870260|ref|NP_792879.1| glutamine/glutamate ABC transporter permease [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|213970378|ref|ZP_03398507.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301381161|ref|ZP_07229579.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302132574|ref|ZP_07258564.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28853507|gb|AAO56574.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213924849|gb|EEB58415.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. tomato T1]
 gi|331016475|gb|EGH96531.1| glutamine/glutamate ABC transporter, permease protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 221

 Score = 96.9 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 89/205 (43%), Gaps = 14/205 (6%)

Query: 165 LPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYI 224
           + F        L      +    ++ + + +  + +++    ++  F       L  +Y+
Sbjct: 1   MTFDYAFALSTLPAFLKAVGVTLQVGLIAILTSLSVAIINAAIA-MFRVPVLHRLVPVYV 59

Query: 225 STFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEI 284
              L    P L+ +   Y           F           F S  IA++    A++ EI
Sbjct: 60  E--LARNTPLLIQLFFIY-----------FALPTMGIRVSGFASAVIAMTFLGGAYLTEI 106

Query: 285 VRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAV 344
           +R+G+ AVP+ Q+E+ +++GL+  +  R V+LPQA    +P L + ++ LLK +++  AV
Sbjct: 107 LRAGIEAVPKAQIESGLSIGLSRWQLLRHVILPQAGILSLPALFANFVFLLKETTVVSAV 166

Query: 345 GFADLVSVGGTIINQTGQAIEIILI 369
              +++    + I    +  E++ +
Sbjct: 167 AVPEILYTTKSYIALYYKTYEMLAV 191



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 35/81 (43%)

Query: 78  PYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFR 137
            Y    S   A L     T  +    ++ +  +  +  A  +    ++  +  VYVE+ R
Sbjct: 4   DYAFALSTLPAFLKAVGVTLQVGLIAILTSLSVAIINAAIAMFRVPVLHRLVPVYVELAR 63

Query: 138 NIPPLVVIFFLYKSVLSVLPI 158
           N P L+ +FF+Y ++ ++   
Sbjct: 64  NTPLLIQLFFIYFALPTMGIR 84


>gi|296162379|ref|ZP_06845172.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
 gi|295887412|gb|EFG67237.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. Ch1-1]
          Length = 280

 Score = 96.9 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 16/260 (6%)

Query: 141 PLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVL 200
           PL++   L              +    GM L     S        N  + + +  + +  
Sbjct: 31  PLLLFAALIGCYGRASGDALAWLAARSGMLLTGTPSSGLAGGFCANIVMSLAAMCVSLCT 90

Query: 201 SLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGS 260
            +    +    + +  + +    ++         + L A+ Y L F   V       G  
Sbjct: 91  GMLLC-IGTIANTRMVRLIASGILNLLR-NTPWLIALYAMLYLLPFYVAV------FGTV 142

Query: 261 TVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAM 320
                F+   + LS    A +AE +R G+ A+P GQ E+A ALG    +  R ++LPQA+
Sbjct: 143 IPFSPFVKAVVGLSLPVTANVAEAMRGGIEAIPSGQWESARALGYRKNQILRYIVLPQAI 202

Query: 321 RSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYL----- 375
             ++P + + Y  L   +SLAV  G +D++SV  TI    G           +Y+     
Sbjct: 203 PLLMPNMMTVYAGLFIGTSLAVVTGTSDVLSVANTITASDGSR---YATAAQLYVLLLFF 259

Query: 376 SLSIMIALFMNRLNAKIALK 395
             S  IA    RL  ++  K
Sbjct: 260 LFSFPIATLSRRLERQMREK 279


>gi|296269105|ref|YP_003651737.1| polar amino acid ABC transporter inner membrane subunit
           [Thermobispora bispora DSM 43833]
 gi|296091892|gb|ADG87844.1| polar amino acid ABC transporter, inner membrane subunit
           [Thermobispora bispora DSM 43833]
          Length = 288

 Score = 96.9 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 35/264 (13%)

Query: 135 VFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNNRGLSFPTLTMDTNAKIFVFSF 194
            F  +   V  F   K        PD               L     T+       V + 
Sbjct: 25  AFGVLFLFVAYFIWLKFDEKGQWEPDLWRPFLQADTWTELILPGLWNTLAAALVAAVLAL 84

Query: 195 VLGIVLSLFATRLSRHFHEKT--------GKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             G V  +   RLS H+  +          +A+P+L +  F  +G   L L+        
Sbjct: 85  AFGTVFGIA--RLSDHWWIRIPAGAIAEFFRAVPVLMMIFFAQYGGSLLGLVV------- 135

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
                             EF ++   L+ Y  + +AEIVR+G+ AVPRG+ EA  A+GL 
Sbjct: 136 -----------------SEFAAVVFGLTVYNGSVLAEIVRAGIRAVPRGESEAGYAMGLR 178

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV-GGTIINQTGQAIE 365
             +  RL+LLPQA+ S++P + SQ + LLK+++L   V +ADL++     +       I 
Sbjct: 179 KNQVMRLILLPQAITSMMPAIVSQLVVLLKDTALGFIVAYADLLNAGARVVPANYFNLIP 238

Query: 366 IILIWMFIYLSLSIMIALFMNRLN 389
            +++   IY+++++ +      L 
Sbjct: 239 SVIVIAVIYIAINVALGYLATWLE 262



 Score = 54.2 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 22/165 (13%)

Query: 14  SRMKFLYD-----MRVHNISVQIILALLLTVIFLWCVNNVYNNMEKSNLSLGIGFLSERA 68
           SR   LYD      R+ N  +     +L   +  +                      +  
Sbjct: 2   SRATVLYDVPGPKARLRNNVLTFAFGVLFLFVAYFIWLK-----------------FDEK 44

Query: 69  GFEIDQGIVPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWI 128
           G        P+    ++   IL G  NT   A    + A   GT+ G  RLS +  +   
Sbjct: 45  GQWEPDLWRPFLQADTWTELILPGLWNTLAAALVAAVLALAFGTVFGIARLSDHWWIRIP 104

Query: 129 CRVYVEVFRNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
                E FR +P L++IFF       +  +      + FG+ + N
Sbjct: 105 AGAIAEFFRAVPVLMMIFFAQYGGSLLGLVVSEFAAVVFGLTVYN 149


>gi|227890103|ref|ZP_04007908.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
 gi|227849547|gb|EEJ59633.1| ABC superfamily ATP binding cassette transporter, membrane protein
           [Lactobacillus johnsonii ATCC 33200]
          Length = 219

 Score = 96.9 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
            + L            +     +  +V+ +    L ++FH      +   Y+   L    
Sbjct: 7   QQSLPQFVKGFQVTVWMSFVGIIGAMVVGI-CCSLIQYFHVPVIDKIVSAYVE--LARNT 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ +   Y             F              I L     A++AE    G   +
Sbjct: 64  PLLIQLFFLYY-----------AFPVIGLKMSAITCGLIGLVFLGGAYMAEGFTGGFDGI 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
            + Q+E+  A+G++  +  R V+ PQ     +P + +  + L+K +S+   +   +L + 
Sbjct: 113 SKNQIESGEAIGMSKWQLARYVVFPQGFALSVPAIAANIIFLIKETSIFSVIAIPELTNT 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIA 393
              +I     + E + + +  Y  + I ++L +  L  ++ 
Sbjct: 173 ALDLIGLYYHSNEYLFVLVIAYAIILIPLSLLLTWLERRVR 213



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 34/65 (52%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
            + GF  T W++F G+I A ++G      +     ++  I   YVE+ RN P L+ +FFL
Sbjct: 13  FVKGFQVTVWMSFVGIIGAMVVGICCSLIQYFHVPVIDKIVSAYVELARNTPLLIQLFFL 72

Query: 149 YKSVL 153
           Y +  
Sbjct: 73  YYAFP 77


>gi|188532631|ref|YP_001906428.1| GltK protein [Erwinia tasmaniensis Et1/99]
 gi|188027673|emb|CAO95524.1| GltK protein [Erwinia tasmaniensis Et1/99]
          Length = 229

 Score = 96.9 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 14/225 (6%)

Query: 168 GMFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTF 227
           G  L  R        +     +   +  L ++L +    L+  +   T + L        
Sbjct: 13  GYMLWGRVTEGEPGGVLLTLIMATSAGFLALMLGVLMAGLAWRYGGWTRRVL------FL 66

Query: 228 LIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRS 287
               +  + LI + + L+F  PV+      GGS   P  +++ IAL+ +T+A +     +
Sbjct: 67  WASFIRGIPLIFVIFWLYFLLPVV-----FGGSIPGP--LTVIIALAWFTSAAVMHSTLA 119

Query: 288 GLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFA 347
           GL ++P GQ EA IA G +  K   ++LLPQA  +++P      ++LLK++SLA  V   
Sbjct: 120 GLESLPAGQTEAGIASGFSKIKILTVILLPQAWPNLLPSYLGLLISLLKDTSLAFIVNVP 179

Query: 348 DLVSVGGTIINQTG-QAIEIILIWMFIYLSLSIMIALFMNRLNAK 391
           +L +V G + N+      EI L    IY  L   +A    +   +
Sbjct: 180 ELTTVAGQVNNRVQLYPAEIFLFVGVIYYLLCSALAYLAGKGLKR 224


>gi|323356727|ref|YP_004223123.1| amino acid ABC transporter permease [Microbacterium testaceum
           StLB037]
 gi|323273098|dbj|BAJ73243.1| ABC-type amino acid transport system, permease component
           [Microbacterium testaceum StLB037]
          Length = 218

 Score = 96.9 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 10/210 (4%)

Query: 187 AKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHF 246
             +F     L +VL +    + R       + +   Y+S      L  +      +   F
Sbjct: 19  LVLFFAGGALALVLGIIVGAM-RVSPVPIARGVGTFYVSAIRNTPLTLV-----FFAFVF 72

Query: 247 DKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLT 306
             P L      G             AL  YTA ++AE +RSG+  VP GQ EAA ALGLT
Sbjct: 73  ALPPLLGLRLTGDV----SLTLGICALGIYTATYVAEAIRSGVNTVPVGQAEAARALGLT 128

Query: 307 HRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEI 366
             +   L++LPQA RS+IPP+ S ++ LLKN+++A      ++ SV   +  +   A  +
Sbjct: 129 FGQVMSLIVLPQAFRSVIPPMVSVFIALLKNTTVAAGFSIVNIGSVRNYLSERGENAFIV 188

Query: 367 ILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
           IL  M ++++L ++++     L  +  +  
Sbjct: 189 ILWIMVVFVALVLLLSWLQRTLENRWRVAR 218



 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 29/61 (47%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
            V T  L F+G   A ++G +VGA R+S   +   +   YV   RN P  +V F    ++
Sbjct: 15  LVGTLVLFFAGGALALVLGIIVGAMRVSPVPIARGVGTFYVSAIRNTPLTLVFFAFVFAL 74

Query: 153 L 153
            
Sbjct: 75  P 75


>gi|327183918|gb|AEA32365.1| amino acid ABC transporter permease [Lactobacillus amylovorus GRL
           1118]
          Length = 224

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 17/188 (9%)

Query: 209 RHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMS 268
           R    K  + +  +Y+  F I     L+     Y +++  P     N+       P    
Sbjct: 47  RTMPNKIIRCILRVYMEIFRILPSVVLL-----YLVYYILPRSLHINW-------PGTWM 94

Query: 269 LYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLT 328
             +A S + AA  ++IVR  L +VP  Q E+ +ALGL+  +    VLLPQA +  +P   
Sbjct: 95  AVLAFSLWVAAEFSDIVRGALQSVPLAQKESGLALGLSKTQLFLYVLLPQAFKLELPATI 154

Query: 329 SQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIE-----IILIWMFIYLSLSIMIAL 383
           +    ++K +S+ + +   D+++VG  II    Q        +  +  F Y  L   +++
Sbjct: 155 NLATRVIKTTSILMLISVMDVINVGQQIIEANNQKFPTGVFWVYGLIFFFYFILDYPLSV 214

Query: 384 FMNRLNAK 391
           +   L AK
Sbjct: 215 WAKSLMAK 222



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 46/97 (47%)

Query: 77  VPYTSDSSYATAILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVF 136
           +      S    +LVG   + W+A   +I   +IGT+ G  R   NK++  I RVY+E+F
Sbjct: 6   INVLFSGSNFDRLLVGLWTSIWIAALSIIIGLLIGTIFGVLRTMPNKIIRCILRVYMEIF 65

Query: 137 RNIPPLVVIFFLYKSVLSVLPIPDHSIVLPFGMFLNN 173
           R +P +V+++ +Y  +   L I      +    F   
Sbjct: 66  RILPSVVLLYLVYYILPRSLHINWPGTWMAVLAFSLW 102


>gi|251788813|ref|YP_003003534.1| polar amino acid ABC transporter inner membrane subunit [Dickeya
           zeae Ech1591]
 gi|247537434|gb|ACT06055.1| polar amino acid ABC transporter, inner membrane subunit [Dickeya
           zeae Ech1591]
          Length = 233

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 93/222 (41%), Gaps = 18/222 (8%)

Query: 173 NRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFLIFGL 232
              L     T+      F  + ++G+ +++   RL   F +KT   L       F+  G+
Sbjct: 11  YFLLEGIANTLMVTLTCFTSALIIGLTVAVLR-RLVFPFIKKTLDFL------VFIFRGI 63

Query: 233 PTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSGLIAV 292
           P L+ + L Y           F            +++ I++   +  ++AE+ R  L  V
Sbjct: 64  PVLIAVFLVY-----------FGLPATGLSISPLLAMNISIGLISGGYLAEVFRGALQLV 112

Query: 293 PRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSV 352
              ++ AA A GL+  +  R + +PQ  R  +P + +++ ++LK+S  A  VG +++   
Sbjct: 113 EPSEITAAKAAGLSKLQIIRYIEIPQMFRFSVPGILNEFSSVLKSSPFAYTVGISEITKQ 172

Query: 353 GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIAL 394
             ++   T   + I  +   +Y  +  +  L   +L  K  +
Sbjct: 173 AMSLTATTMNGLVIYTLAGILYFLIYKLSILAAKQLEIKFKM 214



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%)

Query: 89  ILVGFVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFL 148
           +L G  NT  +  +    A IIG  V   R      +       V +FR IP L+ +F +
Sbjct: 13  LLEGIANTLMVTLTCFTSALIIGLTVAVLRRLVFPFIKKTLDFLVFIFRGIPVLIAVFLV 72

Query: 149 YKSVLSV 155
           Y  + + 
Sbjct: 73  YFGLPAT 79


>gi|332040173|gb|EGI76554.1| polar amino acid abc transporter, inner membrane subunit
           [Hylemonella gracilis ATCC 19624]
          Length = 266

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 8/168 (4%)

Query: 223 YISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIA 282
           + S  +I  L +   + L Y      P                +  L + +    AA +A
Sbjct: 104 WPSIAVIEFLRSTPTLLLIYVCFLALPQ--------AGIKLSTYWMLTLPVGLSAAAVVA 155

Query: 283 EIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAV 342
           E+ R+G++AVPRGQ +AA +LGLT  +    V+  QA+R I+P L +Q + ++K+++   
Sbjct: 156 EVYRAGVLAVPRGQTDAARSLGLTDTQVFFHVVFLQALRYIVPALVAQLVIVVKDTTFGY 215

Query: 343 AVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            V + +L+     +I      + + L+   +Y  ++  I+    RL  
Sbjct: 216 IVTYGELLQNAKVLIANYHSLVPVYLVVALLYCLVNYAISWASQRLGR 263


>gi|330861366|emb|CBX71601.1| histidine transport system permease protein hisQ [Yersinia
           enterocolitica W22703]
          Length = 198

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 2/157 (1%)

Query: 203 FATRLSRHFHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTV 262
               + + F  +  + +   Y  T L+ G+P LV++ L +                G   
Sbjct: 32  LINAVIKLFGPRWLRWISTGY--TTLVRGIPELVIMLLLFFGGEMLVNGFFGLLGLGPVR 89

Query: 263 SPEFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRS 322
              F+S  +A+     A+  E  R     V RGQ+EAA+A G+  R+    ++LPQ +  
Sbjct: 90  FNTFVSGVLAIGIVFGAYYTETFRGAFQTVERGQLEAAVAYGMRPRQVFWRIMLPQMLSF 149

Query: 323 IIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQ 359
            IP + + +L L+K S+L   +G  D+V +      Q
Sbjct: 150 AIPGINNNWLGLMKASALISILGLEDMVWLAEQAGAQ 186


>gi|119025599|ref|YP_909444.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765183|dbj|BAF39362.1| permease protein of ABC transporter for glutamate [Bifidobacterium
           adolescentis ATCC 15703]
          Length = 225

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 169 MFLNNRGLSFPTLTMDTNAKIFVFSFVLGIVLSLFATRLSRHFHEKTGKALPLLYISTFL 228
           +F          + ++      +FS +LG++L +      R     + + +   Y+  F 
Sbjct: 7   LFSQYNIPGAFLVNIELTLWSALFSTILGVILVMM-----RISPIASLRTVSGAYVELFK 61

Query: 229 IFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLYIALSCYTAAFIAEIVRSG 288
              L  +++  +            +F+F   +  +  F      LS YTAAF+ E +RSG
Sbjct: 62  NLPLTIIMVFMV-----LGAYAQLKFSF-SDTFATNFFWLAVTGLSLYTAAFVCESLRSG 115

Query: 289 LIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFAD 348
           +  VP GQ EAA ALGL   +A   ++LPQA R  + PL +  + LLKNS++A A   A 
Sbjct: 116 INTVPLGQAEAARALGLNFMQAATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVAT 175

Query: 349 LVSV--GGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALKE 396
             S      I     Q + I LI+ F Y+ L I I +    L+ K+A++ 
Sbjct: 176 ETSTMMSEMIEYHADQIVPIFLIFAFGYVVLIIPIGMLTTYLSNKLAVRR 225



 Score = 38.4 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 36/84 (42%)

Query: 93  FVNTFWLAFSGMIPATIIGTLVGAGRLSANKLVAWICRVYVEVFRNIPPLVVIFFLYKSV 152
           F+    L     + +TI+G ++   R+S    +  +   YVE+F+N+P  +++ F+    
Sbjct: 17  FLVNIELTLWSALFSTILGVILVMMRISPIASLRTVSGAYVELFKNLPLTIIMVFMVLGA 76

Query: 153 LSVLPIPDHSIVLPFGMFLNNRGL 176
            + L             +L   GL
Sbjct: 77  YAQLKFSFSDTFATNFFWLAVTGL 100


>gi|330820139|ref|YP_004349001.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
 gi|327372134|gb|AEA63489.1| Polar amino acid ABC transporter, inner membrane subunit
           [Burkholderia gladioli BSR3]
          Length = 228

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/132 (31%), Positives = 72/132 (54%)

Query: 265 EFMSLYIALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSII 324
           E  +  +A++    A+  EIVR+G+ AVPRG  EAA AL ++  +A R V+LPQA   + 
Sbjct: 92  EVTAAVLAMTLNLGAYSVEIVRAGMAAVPRGHHEAAAALAMSRAQAFRHVVLPQAFAKVF 151

Query: 325 PPLTSQYLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALF 384
           P LTSQ +  +  S++   +  ADL      I ++  +A E   +    YL++++++   
Sbjct: 152 PALTSQIVITMLGSAVVSQISVADLTYAASYIQSRNFRAFETYFVITLAYLAMALLLRFV 211

Query: 385 MNRLNAKIALKE 396
           +N    ++ L+ 
Sbjct: 212 LNTAGRRLFLRR 223


>gi|255525499|ref|ZP_05392435.1| amino acid ABC transporter permease [Clostridium carboxidivorans
           P7]
 gi|255510767|gb|EET87071.1| amino acid ABC transporter permease [Clostridium carboxidivorans
           P7]
          Length = 98

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 297 MEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQYLNLLKNSSLAVAVGFADLVSVGGTI 356
            EAA ALG+++ +    +++PQA+R++IP + ++ +NL+K+++L  A+G  DL+     I
Sbjct: 1   FEAAKALGMSYGQTMVKIIIPQAVRNVIPAVCNESINLIKDTALVAAIGIGDLLRAAKEI 60

Query: 357 INQTGQAIEIILIWMFIYLSLSIMIALFMNRLNAKIALK 395
           + +    I   +I   +YL ++ ++      +  K ++ 
Sbjct: 61  VTRDF-TITPFMIAAVVYLFITSILVTVFRNIEKKYSVY 98


>gi|17546823|ref|NP_520225.1| amino-acid transmembrane ABC transporter protein [Ralstonia
           solanacearum GMI1000]
 gi|17429123|emb|CAD15811.1| probable amino-acid transmembrane abc transporter protein
           [Ralstonia solanacearum GMI1000]
          Length = 248

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 11/186 (5%)

Query: 211 FHEKTGKALPLLYISTFLIFGLPTLVLIALKYQLHFDKPVLGQFNFIGGSTVSPEFMSLY 270
              +      L  +    I   P L+ +   +           F          E+ +  
Sbjct: 46  RAWRIAPFNGLFKVYVEAIRNTPFLIQLMFVF-----------FGLPSLGLQINEWQAAL 94

Query: 271 IALSCYTAAFIAEIVRSGLIAVPRGQMEAAIALGLTHRKATRLVLLPQAMRSIIPPLTSQ 330
           +       A+I EIVR+G+   PRGQ+EAA AL ++     R V+L  A++ + P L+SQ
Sbjct: 95  LTTVVNLGAYITEIVRAGIQETPRGQLEAASALAMSRWTCFRHVVLRPALQKVWPALSSQ 154

Query: 331 YLNLLKNSSLAVAVGFADLVSVGGTIINQTGQAIEIILIWMFIYLSLSIMIALFMNRLNA 390
            + ++  +S+   +   DL      I ++  +A E  L+   +Y +L++++   +  +  
Sbjct: 155 IVIVMLGTSVVSQIAAQDLTFAANFIQSRNFRAFETYLVVTALYFALALLLRQLLAWIAQ 214

Query: 391 KIALKE 396
           +  +  
Sbjct: 215 RFVVVR 220


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.316    0.145    0.392 

Lambda     K      H
   0.267   0.0444    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,218,661,487
Number of Sequences: 13984884
Number of extensions: 326949312
Number of successful extensions: 2404408
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 36377
Number of HSP's successfully gapped in prelim test: 61033
Number of HSP's that attempted gapping in prelim test: 2235115
Number of HSP's gapped (non-prelim): 175194
length of query: 398
length of database: 4,792,584,752
effective HSP length: 141
effective length of query: 257
effective length of database: 2,820,716,108
effective search space: 724924039756
effective search space used: 724924039756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.0 bits)
S2: 82 (36.1 bits)